TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.368891 %AT, 7116181 nt, 69947 terms. Intergenic: 0.41439 %AT, H2T: 951007 nt, 9244 terms; T2T: 268985 nt, 6090 terms; H2H: 394845 nt, 7925 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|186474773|ref|NC_010622.1| Burkholderia phymatum STM815 chromosome 1, complete sequence (length 3479187) TERM 1 861 - 821 - g 73 -12.5 -3.35813 | overlap 822 CTGGACGCCAACGAA GCCGCGGCAGCCCG-CCGC ACGTG GCGGCCGGGC-GCTGCCGC GCAGGCCGCGGGCGG Bphy_0001 362 - 1918 + | chromosomal replication initiator protein DnaA Bphy_0002 2175 - 3278 + | DNA polymerase III, beta subunit TERM 2 3328 - 3297 - f 81 -11.6 -3.82084 | gap 1, opp_overlap 3299 3301 3305, overlap 3299 GTCCAACACGAAGAA CACACCAA-GGGGCG CAG CGCCCCTTTGGCGTT TTTATGGTGTTTTGA TERM 3 3326 - 3299 - f 88 -14.2 -3.49169 | gap 1, opp_overlap 3299 3301 3305, overlap 3297 CCAACACGAAGAACA CACCAA-GGGGCG CAG CGCCCCTTTGGCG TTTTTATGGTGTTTT TERM 4 3299 - 3326 + F 100 -12 -5.02201 | gap 1, opp_overlap 3299 3297, overlap 3301 3305 CCAACACGAAGAACA CACCAA-GGGGCG CAG CGCCCCTTTGGCG TTTTTATGGTGTTTT TERM 5 3301 - 3324 + F 73 -13.2 -2.73702 | gap 1, opp_overlap 3299 3297, overlap 3299 3305 AACACGAAGAACACA CCAA-GGGGCG CAG CGCCCCTTTGG CGTTTTTATGGTGTT TERM 6 3305 - 3319 + F 87 -12.8 -3.82067 | opp_overlap 3299 3297, overlap 3301 3299 CGAAGAACACACCAA GGGGCG CAG CGCCCC TTTGGCGTTTTTATG TERM 7 3981 - 3949 - g 72 -7 -4.2349 | gap 1, opp_overlap 3953 GGGCGAGACGGAAAA TCG-CGGCACTGAAG TGCA CTTCATGGCCGACGA GACGATCTTCGGCAA TERM 8 5175 - 5214 + G 86 -12.9 -3.9093 | gap 3 TCGCCGCCGAAGGTG CGACGCC-GATCGCCG-GCG ACG CGCTCGGCGAGCTGGCG-CG TTCTTATCTGCTGGC Bphy_0003 3392 - 5863 + | DNA gyrase, B subunit TERM 9 5921 - 5942 + T 100 -11.6 -5.76949 | opp_overlap 5921 TAGTCAAATGAAAAA CGCCAACC TATTCC GGTTGGCG TTTTTTTTGCACATC TERM 10 5942 - 5921 - T 100 -11.6 -5.00138 | opp_overlap 5921 TAGTCAAATGAAAAA CGCCAACC TATTCC GGTTGGCG TTTTTTTTGCACATC Bphy_0004 6237 - 5956 - | hypothetical protein TERM 11 8373 - 8390 + G 70 -7.7 -3.96148 | gap 1 TTCTCGCGGGTGGTG TGGTCGGC ATC GCCG-CCA TTTATAGTGACGAGC Bphy_0006 7331 - 8734 + | ethanolamine transproter TERM 12 9592 - 9575 - g 81 -3.3 -5.0916 | opp_overlap 9580, overlap 9580 GCCGGAACAGAAAAA GCCAATG CGGG CTTCGGC ATTTCGCTCGCGTTG Bphy_0007 8816 - 10210 + | ethanolamine ammonia lyase large subunit Bphy_0008 10207 - 11001 + | ethanolamine ammonia-lyase Bphy_0009 11434 - 11042 - | hypothetical protein TERM 13 11500 - 11468 - R 100 -17.7 -4.08767 | TCGACTCGCTGAAAA GGCGGGCGAACCGCA GCG CGCGGTTCGCCCAAC GGGAGCACGACGCTC Bphy_0010 13034 - 11514 - | aldehyde dehydrogenase TERM 14 12701 - 12753 + g 80 -14.8 -3.17075 | overlap 12700 CGGCCGCCATCGTTT CGCGCAGCGGCTTGCCGTTGTCGA TCGAT TCGGCGACGGCGAGGCGTTGCAGG TTCGCTTCGAGGCGG TERM 15 13162 - 13194 + H 84 -2.1 -5.40072 | gap 3, overlap 13167 13181 CGCCGACGGGCAACG CCG-GTGCA-CGC-AG CACT CTCGCGATGCATGCGG TTTTTTTGCGCGCAA Bphy_0011 13381 - 14397 + | AraC family transcriptional regulator Bphy_0012 14834 - 15019 + | hypothetical protein Bphy_0013 15034 - 16425 + | DEAD/DEAH box helicase domain-containing protein Bphy_0014 16752 - 17906 + | aminotransferase class I and II TERM 16 18706 - 18687 - g 81 -11.4 -4.04206 | overlap 18688 18701 CGACGCTCACACAAA GCGCGCTC GACG AAGCGCGC GACCGTCTGCCGGTG Bphy_0015 17921 - 18763 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Bphy_0016 18797 - 19588 + | extracellular solute-binding protein TERM 17 19607 - 19644 + F 100 -23.5 -4.19258 | opp_overlap 19590 19607 19611, overlap 19611 TGCGCTCTTCACACA GATACGCGCCGCGTGGT TTTC GCCACGCGGCGCGTTTC TTTTGCGTAACGTCT TERM 18 19644 - 19607 - f 100 -22.8 -2.87132 | opp_overlap 19607 19611, overlap 19590 19611 TGCGCTCTTCACACA GATACGCGCCGCGTGG TTTTCG CCACGCGGCGCGTTTC TTTTGCGTAACGTCT TERM 19 19611 - 19640 + F 100 -22.9 -4.68908 | opp_overlap 19607 19611, overlap 19607 CTCTTCACACAGATA CGCGCCGCGTGGT TTTC GCCACGCGGCGCG TTTCTTTTGCGTAAC TERM 20 19640 - 19611 - f 100 -22.2 -3.05022 | opp_overlap 19611 19607, overlap 19607 CTCTTCACACAGATA CGCGCCGCGTGG TTTTCG CCACGCGGCGCG TTTCTTTTGCGTAAC Bphy_0017 19749 - 20486 + | putative transmembrane anti-sigma factor Bphy_0018 20605 - 21123 + | ECF subfamily RNA polymerase sigma-24 factor Bphy_0019 21120 - 21953 + | putative transmembrane anti-sigma factor TERM 21 21973 - 22000 + F 100 -18.4 -4.84602 | TCGTTTTTCTATATT GGCGGCTGCGCC TTCG GGTGCGGCCGCC TTTGTTTGTTTATAT TERM 22 22093 - 22107 + F 71 -7.8 -4.09739 | overlap 22094 CACGTGGTTCGTCAC TGTGCG TAC CGCACG TTTTCAAGGAGTTGG Bphy_0020 22125 - 22394 + | hypothetical protein TERM 23 22455 - 22430 - f 76 -4.5 -4.84529 | opp_overlap 22430, overlap 22432 GCAGAAAGTGAAAAA GGCCGGAAAGC TTTC GCTAACCGGTC TTTCGAATACTTGGT TERM 24 23091 - 23111 + F 100 -11.1 -5.40474 | CGGGAATGTCGTAGG CCGGCAACC GCC GGTTGGCGG TTTTTTTACGCCCGT Bphy_0022 23411 - 25324 + | type VI secretion protein TERM 25 26626 - 26605 - g 93 -6.5 -5.11033 | gap 1, opp_overlap 26606, overlap 26596 CAGAAGGCGAAAAAA CCGCGCTCGC ACG GCGAG-GTGG CGATTGTGACGGGCT Bphy_0023 25363 - 28020 + | type VI secretion system Vgr family protein TERM 26 28372 - 28354 - g 81 -3 -5.06451 | TACGATCCCAAAAAA GAGGACCG TGT CGTTTCTC AACTTGATTTGACGA TERM 27 28618 - 28608 - g 74 -2.4 -4.81685 | AGTAAGCATGAAAAA TCCC TAT GGGC CGGAATTAACTATTC Bphy_0024 28054 - 28971 + | hypothetical protein Bphy_0025 29288 - 29647 + | hypothetical protein Bphy_0026 29667 - 30656 + | hypothetical protein TERM 28 30883 - 30862 - f 100 -13 -5.04601 | opp_overlap 30855 CTCAGAAAGCAAAAA GCCCAGCC GGTTAA GGCTGGGC TAAGTGCTTGAATTC TERM 29 31214 - 31238 + G 71 -9.9 -3.75153 | GAATTGCTCGACCGT GTGCTTGCGCC GTG GGTGCGGGCGC TTTCGCTTACGCCCG Bphy_0027 31178 - 31582 + | thioesterase superfamily protein Bphy_0028 31634 - 32500 + | patatin TERM 30 32522 - 32553 + T 72 -8.8 -3.93288 | opp_overlap 32529, overlap 32529 ACTGAAGCGCGCATA TAAAAAAGCGGCCT TCGA AGACCGCTTTTTAA TTTACTTCCGTCGCC TERM 31 32529 - 32546 + T 90 -6.9 -5.04222 | opp_overlap 32529, overlap 32522 CGCGCATATAAAAAA GCGGCCT TCGA AGACCGC TTTTTAATTTACTTC TERM 32 32546 - 32529 - T 100 -9.1 -5.36441 | opp_overlap 32522 32529 CGCGCATATAAAAAA GCGGCCT TCGA AGACCGC TTTTTAATTTACTTC Bphy_0029 33568 - 32555 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 33 34966 - 34954 - g 78 -7.7 -4.41494 | CACGCTGAAGGAAAA CGTGA TCT TCACG AACGTCGCGCTTACG TERM 34 35100 - 35082 - g 78 -8 -4.42806 | overlap 35083 CCATCGCGAAAGAAA CGGGCCGC AAG GCGGCGCA TCCGAACGCCCGCTT TERM 35 35137 - 35188 + G 84 -14.5 -3.36273 | gap 2, opp_overlap 35165, overlap 35178 GCCCGCTTCGCAATG CCCGTCGATC-G-ACGCCGACTGGG AAAA CCCAGCAGGCGTGCCGATCGACGCG TTCGTGTTCGGCGGC Bphy_0030 33920 - 35776 + | phosphoenolpyruvate carboxykinase (GTP) TERM 36 35807 - 35822 + F 90 -11.8 -4.1552 | opp_overlap 35807 35796, overlap 35811 35811 CTAACGCCCATATGA GCCGCC CTCG GGCGGC TTTCTTGAGCGCGTC Bphy_0031 36108 - 37196 + | LysR family transcriptional regulator TERM 37 37248 - 37275 + T 100 -12.7 -5.06816 | opp_overlap 37248 CAAGTCAATAAAAAA GCGCAGTCACC GTAAAA GGCGACTGCGC TTTTTGTTGCAGCCT TERM 38 37275 - 37248 - T 100 -14.9 -5.5074 | opp_overlap 37248 CAAGTCAATAAAAAA GCGCAGTCACC GTAAAA GGCGACTGCGC TTTTTGTTGCAGCCT Bphy_0032 40067 - 37341 - | DNA topoisomerase III TERM 39 37372 - 37394 + g 91 -6.8 -5.02074 | CGAGCGGCAGATTTA GCAGCCGAGG TTT TCGCGGCAGC TTTTTTGGCCGGTGC TERM 40 38233 - 38249 + g 76 -13.7 -3.12351 | opp_overlap 38226 TGCATGAAGGCGTCG CGCGGCA GCT TGCCGCG TTCCATCTGCGACAG TERM 41 38471 - 38490 + g 74 -10 -3.74747 | CCATCGCTTCGCGCA GTTCGTCG TCTT CGACGAGC TTTCCTGCGCCTTCC TERM 42 39097 - 39087 - G 72 -8.2 -4.07568 | GTTCTTGGCCGAAAA GCCG AAG CGGC CGTTGGCTTCACGCT TERM 43 39237 - 39249 + g 79 -10.5 -4.11216 | CGGCAGGCTCCAGAG GCGCG AAT CGCGC TTTTCCGGATCAAAC Bphy_0033 40682 - 40305 - | thioredoxin domain-containing protein Bphy_0034 41906 - 40737 - | DNA protecting protein DprA Bphy_0035 42162 - 42665 + | peptide deformylase Bphy_0036 42691 - 43674 + | methionyl-tRNA formyltransferase Bphy_0037 43774 - 44418 + | lysine exporter protein LysE/YggA Bphy_0038 44522 - 45379 + | peptidase M48 Ste24p TERM 44 45442 - 45422 - f 100 -14.7 -4.19238 | opp_overlap 45422 GCTGCAATTTGAAAA GGGGCGAGC ATG ACTCGCCCC TTTTTGTCGTACAAC TERM 45 45422 - 45442 + F 100 -14 -4.91109 | opp_overlap 45422 GCTGCAATTTGAAAA GGGGCGAG CATGA CTCGCCCC TTTTTGTCGTACAAC TERM 46 45695 - 45741 + G 83 -17.3 -2.52464 | overlap 45739 GAATCGCTCGGTTTC GCGCTC-GACTGCGCCGCGCAGG CCG TCGGCGCGGTGC-GTCAGGGCGC TGCGTTGCCCGCAGC TERM 47 46535 - 46518 - g 73 -9.1 -3.86346 | gap 1, overlap 46519 TGATCGCGCTAGAAA GCGACGCG ACG CGCG-CGC GCCGGATCGGCGAAA Bphy_0039 45662 - 47023 + | sun protein TERM 48 47559 - 47576 + G 78 -7.7 -4.35926 | overlap 47560 CCGCGACTGGAATCT TGCTTCC GACT GGAAGCG TTTTACCTTTACGGT Bphy_0040 47020 - 47610 + | hypothetical protein TERM 49 47632 - 47612 - f 76 -6.8 -4.42464 | gap 1, opp_overlap 47615, overlap 47613 47614 AACGTGCTAAATAAA GTGCGCCGG GCCA CCAGCGC-C GGCAGTCTCGTCGTC TERM 50 47860 - 47872 + G 75 -9.1 -3.95324 | CGGGACGCGGCTGCT CGCGA AGC TCGCG TTCTTCTTCGCGCTC TERM 51 49146 - 49190 + G 72 -8.6 -3.96892 | gap 1, opp_overlap 49145 49147, overlap 49135 49147 49149 ATAGCGACGACGAAG AGACGTCTGGCTATGTCGTCG TGTT CGACGATATCTCC-GACGTCA TTTCTGCTCAGCGTT Bphy_0041 47612 - 50023 + | integral membrane sensor signal transduction histidine kinase TERM 52 50444 - 50487 + G 70 -13.8 -2.62184 | gap 1, overlap 50456 50472 ATGGCGGCGAACGCG TCCGCAGTCG-CGTCGGCGGC GGC GCTGCCGATGATGTCCGCGGA TAGTCTGGGCGGCGG Bphy_0042 50024 - 50713 + | two component Fis family transcriptional regulator TERM 53 50883 - 50911 + F 95 -14 -4.39166 | gap 1 GGCCACCAGGATTCA GCCCCAGGAAATC GCAA GATT-CCTGGGGC TTTTCCTATGTGCGG TERM 54 51014 - 51041 + F 83 -5.6 -4.99134 | opp_overlap 51014 ATCGCGCTGTATCAA GGACTTGCCA TATGTTCT TCGCAAGTCC TTTTTCGTTTCAGGT Bphy_0043 51253 - 51984 + | exsB protein TERM 55 52107 - 52123 + G 73 -5.8 -4.4017 | gap 1, overlap 52107 52108 GGGCGAGGGCGCTAA CG-CCGG ACGT CCGGCCG TTTTCTGCCGGTTCG Bphy_0044 52054 - 52686 + | radical SAM domain-containing protein Bphy_0045 52693 - 53139 + | queuosine biosynthesis protein QueD TERM 56 53715 - 53748 + G 75 -11.8 -3.48276 | GTGGCGTCGCTAGCG TCGTGCGCGCA-GCCG CTTA CGGCATGCG-GCGCGA TTATCTGCAGAACGC Bphy_0046 53327 - 54109 + | 2-dehydro-3-deoxyglucarate aldolase TERM 57 54630 - 54616 - g 72 -7 -4.30719 | overlap 54618 GTCTGGTACAAGAAA GCGGCC GAG GGCGGC GACATGACGGCTCAG Bphy_0047 54106 - 54816 + | Sel1 domain-containing protein TERM 58 54816 - 54849 + T 100 -12.5 -4.50058 | opp_overlap 54821 54822, overlap 54821 54822 AGCAAAGCCGCAATG AAAAACGGCGCCTGA ACTT TCAGGCGCCATTTTG TTTTGCTTCTCGCTG TERM 59 54821 - 54844 + T 100 -12.4 -5.19998 | opp_overlap 54821 54822, overlap 54816 54822 AGCCGCAATGAAAAA CGGCGCCTGA ACTT TCAGGCGCCA TTTTGTTTTGCTTCT TERM 60 54844 - 54821 - T 100 -14.6 -4.86621 | opp_overlap 54821 54816 54822, overlap 54822 AGCCGCAATGAAAAA CGGCGCCTGA ACTT TCAGGCGCCA TTTTGTTTTGCTTCT TERM 61 54822 - 54843 + T 100 -15.9 -3.69559 | opp_overlap 54821 54822, overlap 54821 54816 GCCGCAATGAAAAAC GGCGCCTGA ACTT TCAGGCGCC ATTTTGTTTTGCTTC TERM 62 54843 - 54822 - T 90 -15.9 -3.5125 | opp_overlap 54822 54821 54816, overlap 54821 GCCGCAATGAAAAAC GGCGCCTGA ACTT TCAGGCGCC ATTTTGTTTTGCTTC Bphy_0048 56023 - 54875 - | rod shape-determining protein RodA TERM 63 56052 - 56085 + r 86 -16.1 -2.70932 | gap 1, opp_overlap 56057, overlap 56057 56061 CTCGTCGATGCCGCC GGAAACG-GGGCCGCG CGG CGCGGCTTGCGTTTCC TCGTTGCGCGACGGC TERM 64 56057 - 56080 + r 72 -8.8 -3.84246 | gap 1, opp_overlap 56057, overlap 56052 56061 CGATGCCGCCGGAAA CG-GGGCCGCG CGG CGCGGCTTGCG TTTCCTCGTTGCGCG Bphy_0049 58436 - 56034 - | penicillin-binding protein 2 TERM 65 56061 - 56075 + g 77 -12.8 -3.31817 | opp_overlap 56057, overlap 56057 56052 GCCGCCGGAAACGGG GCCGCG CGG CGCGGC TTGCGTTTCCTCGTT TERM 66 56105 - 56138 + g 91 -16.7 -3.65199 | gap 1, overlap 56099 TGCGCGACGGCGCGG CTGCGACCGGCC-GCG ATT CGCTGGCCGGTCGGGG TTTGCGTGGGGACTT TERM 67 56457 - 56488 + g 74 -10.8 -3.76224 | gap 1 CTCACCGCTGGGCGC CGTCGGCGCGCTGCC GAT GACGG-GTGCCGACG TTTCCTCCGTCGCCG TERM 68 58557 - 58547 - R 74 -8.2 -4.11216 | opp_overlap 58550, overlap 58548 TCGTGAGCGGGAAAA CGGC GCG GCCG TCAGATGGGCCGCGT Bphy_0050 59070 - 58558 - | rod shape-determining protein MreD Bphy_0051 60170 - 59067 - | rod shape-determining protein MreC TERM 69 60252 - 60236 - R 95 -13.7 -3.97368 | CGCCCAACGCACAAA GGCTGGC AAA GCCAGCC TGTCAGTGCGCATTG Bphy_0052 61332 - 60289 - | cell shape determining protein MreB TERM 70 61165 - 61180 + g 70 -2.5 -4.66833 | overlap 61165 CTTTGCTTCCTTCCC GACCG CCTGAA TGGTC TTTTTGCCATTCGGG Bphy_0053 61712 - 62011 + | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 71 62144 - 62124 - f 83 -13.9 -3.57144 | opp_overlap 62122 62136 GGCCGGATGCCCAAA CGGCGGCGC ACT GCGCCGTCG CGCTTTCCAGGAAAA TERM 72 62671 - 62704 + G 77 -13.1 -3.34962 | gap 1 CGCCGCGACGGGCAC CGACACGGGCGGATCG ATC CG-TCAGCCCGCGTCG TTCTCGGGTATCACG Bphy_0054 62165 - 63658 + | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 73 64328 - 64305 - g 81 -7.4 -4.56597 | overlap 64308 CCCGTGGGGCAAAAA GAATTCGGCA CGCG CGCCGAAATC AAGAACCTGAACTCG TERM 74 64325 - 64308 - g 78 -7.7 -4.40561 | overlap 64305 GTGGGGCAAAAAGAA TTCGGCA CGCG CGCCGAA ATCAAGAACCTGAAC Bphy_0055 63660 - 65135 + | glutamyl-tRNA(Gln) amidotransferase, B subunit TERM 75 65184 - 65229 + F 75 -5.4 -4.57073 | overlap 65176 65178 65188 GCTGCGTGCCAGGCT GTGA-CGGGCTGTTGTCGCATC GAAA GTCGCG-CAACGGCCCGTTTGC TTTTTCACCGGGATA TERM 76 65188 - 65224 + F 85 -10.8 -4.32046 | gap 1, overlap 65176 65178 65184 CGTGCCAGGCTGTGA CGGGCTGTTGTCGCATC GAAA GTCGCG-CAACGGCCCG TTTGCTTTTTCACCG TERM 77 65361 - 65371 + G 72 -8.2 -4.08216 | CTGGCGTCGATCCGT CGGC GAA GCCG TTTTCGACGGGATCG Bphy_0056 65270 - 66106 + | hypothetical protein TERM 78 66175 - 66148 - f 74 -2.6 -4.9445 | overlap 66151 ACAATGAAGGAAAAA CATGTTGCGCGT GATC ACGGCCAACCTG AACGGCATCCGTTCG Bphy_0057 66149 - 66928 + | exodeoxyribonuclease III Xth Bphy_0058 68167 - 66953 - | peptidase M48 Ste24p TERM 79 67380 - 67398 + g 74 -10.3 -3.72576 | CGCTCGCGTGCATGC TCGCGCA ACGCA TGCGCGA TTTCATGGCCGAGCA Bphy_0059 69561 - 68167 - | major facilitator transporter TERM 80 68316 - 68278 - G 72 -8.8 -3.96148 | gap 1 CTTTGTGACGAGAAA GCCG-CTTGCCGCGGAC GCCAGT GTGCGCGGCACGGCAGC CAGCGACGTGAACAG TERM 81 69509 - 69474 - G 79 -11 -3.83324 | opp_overlap 69473 69470, overlap 69475 69477 CGAGAAAGACGCAAA TCAGCATGCGCGCGTT GAGA AACGCGCGCCAGCCGG GATGTTCTTCGTGTG TERM 82 69508 - 69475 - G 77 -14.5 -2.89271 | opp_overlap 69473 69470, overlap 69474 69477 GAGAAAGACGCAAAT CAGCATGCGCGCGTT GAGA AACGCGCGCCAGCCG GGATGTTCTTCGTGT TERM 83 69506 - 69477 - G 71 -13.5 -2.98471 | opp_overlap 69473 69470, overlap 69475 69474 GAAAGACGCAAATCA GCATGCGCGCGTT GAGA AACGCGCGCCAGC CGGGATGTTCTTCGT Bphy_0060 70183 - 69575 - | methionine biosynthesis protein MetW Bphy_0061 71325 - 70180 - | homoserine O-acetyltransferase TERM 84 71525 - 71500 - R 79 -12.7 -3.28712 | gap 1 CGGCGCGTTGTACAA GCTGTGACCGTC ATG GACGGTCA-AGC GCAGAGTATATCGGA Bphy_0062 72267 - 71569 - | TetR family transcriptional regulator TERM 85 72089 - 72127 + g 76 -6 -4.56133 | opp_overlap 72071 72069, overlap 72093 72095 TAGAGCGCCGCCTCC GATACGCCGAGGC-GCGC GGCCA GCGCCGCCGTGGTG-ATC TTTTCGTTCTTCGGC Bphy_0063 73062 - 72304 - | pyrimidine 5'-nucleotidase Bphy_0064 74161 - 73262 - | acetylglutamate kinase Bphy_0065 74476 - 74751 + | hypothetical protein Bphy_0066 76426 - 74789 - | TPR repeat-containing protein TERM 86 76411 - 76396 - G 70 -6.2 -4.26461 | opp_overlap 76396 AGGAATCCAAAAGAA CTTGAT GTGG ATCAAG TGATGTGTTGAGCAT TERM 87 77227 - 77206 - g 72 -13 -3.08996 | GATGCTCACGGAAGA GCTGCGCG ACGCCG CGCGCAGC GACGAGGGCCTCAAG TERM 88 77732 - 77750 + G 72 -13.1 -3.09968 | opp_overlap 77732 77731 77727, overlap 77726 GTCAACGAAACCAAG CCGCGCG GCACG CGCGCGG TGTTGCGGTTGCCTC TERM 89 77809 - 77781 - g 84 -13.2 -3.72576 | overlap 77782 77785 TGGCCCGCGAGCAAA CGGACGCGG-GCCG GCA CGGCGCCGCGT-CG TCCAACACGGAGAAA TERM 90 77806 - 77785 - g 71 -13.7 -2.67803 | gap 1, overlap 77781 77782 CCGCGAGCAAACGGA CGCGG-GCCG GCA CGGCGCCGCG TCGTCCAACACGGAG Bphy_0067 76529 - 77833 + | integral membrane sensor signal transduction histidine kinase Bphy_0068 77830 - 78372 + | two component Fis family transcriptional regulator TERM 91 78400 - 78431 + T 100 -21.6 -3.90744 | opp_overlap 78402, overlap 78402 ACATGGCGCATGAAG AAGGGCGGCGCTCC TCGC GGAGCGCCGCCCTC TTGTTTGGCCGGCCC TERM 92 78429 - 78402 - T 100 -24.2 -3.72027 | opp_overlap 78400 78402 ATGGCGCATGAAGAA GGGCGGCGCTCC TCGC GGAGCGCCGCCC TCTTGTTTGGCCGGC TERM 93 78402 - 78429 + T 100 -24.2 -3.54488 | opp_overlap 78402, overlap 78400 ATGGCGCATGAAGAA GGGCGGCGCTCC TCGC GGAGCGCCGCCC TCTTGTTTGGCCGGC Bphy_0069 79798 - 78455 - | heat shock protein HslVU, ATPase subunit HslU TERM 94 79438 - 79452 + g 75 -10 -3.84451 | GGTCTTCGGCCTTCG TGCGCA TCT TGCGCA TTTCGGTTTCGCGCG Bphy_0070 80344 - 79808 - | 20S proteasome A and B subunits TERM 95 80667 - 80642 - R 100 -16.9 -5.79595 | opp_overlap 80662 CCTGAAAAGAAAAAA GAGGCGCACGA ATCA CCGTGCGCCTC TGACGAAGCGTATCT Bphy_0071 81137 - 80718 - | TraR/DksA family transcriptional regulator TERM 96 81649 - 81662 + r 80 -2.3 -5.22039 | TTAATTGCCGCGTTT GTGCT TTTG AGCTC TTTTTTGCCTTTCCA Bphy_0072 82840 - 81752 - | cobalamin synthesis protein P47K TERM 97 81809 - 81830 + g 81 -5.2 -4.88067 | CGGCAGTTCGATGCC GATGAACA CCATCT TGTTCGTC TTTTTCTCGATGGGT Bphy_0073 84208 - 83006 - | PUA domain-containing protein TERM 98 83119 - 83141 + g 73 -14.8 -2.52742 | overlap 83118 83116 GCGCATCGACCCGTG CGTCGGCGGC CGC GCCGGCGACG ATCTTCTGGAACAGT Bphy_0074 85217 - 84294 - | tyrosine recombinase XerC Bphy_0075 85947 - 85228 - | hypothetical protein Bphy_0076 86894 - 86034 - | diaminopimelate epimerase TERM 99 86858 - 86872 + g 73 -5.6 -4.33165 | opp_overlap 86857 GCACGACGAAGTCAT TGCCCG CGC CGTGCA TTTTGGTGAATTTCA TERM 100 86973 - 86958 - R 71 -6.8 -4.25104 | gap 1, opp_overlap 86924 CGCGCTTCAGTAAAA GCTCGGG TCG CCCG-GC GGGCGAGTCTTGAAG Bphy_0077 87833 - 86949 - | lipid A biosynthesis acyltransferase TERM 101 88876 - 88900 + G 74 -12.7 -3.28791 | CGATACGTACGGCGG CGCGGCTCCGC ACG GCGGCGGCGCG TTCTCGGGCAAGGAT TERM 102 89212 - 89178 - g 100 -9.8 -5.15634 | opp_overlap 89195 CAGTCTATGAAAAAA CGGCCGCCTACGGCCA CTT CGGCCGCGAGGAGCCG GAATTCTCGTGGGAA Bphy_0078 88106 - 89293 + | methionine adenosyltransferase TERM 103 89361 - 89388 + T 100 -19.2 -5.67063 | opp_overlap 89361 GGCCGCAAAGAAAAA CGCCCTGCATGC GAAC GCATGCGGGGCG TTTTTTTCTGATGCG TERM 104 89388 - 89361 - T 100 -17 -5.27335 | opp_overlap 89361 GGCCGCAAAGAAAAA CGCCCTGCATGC GAAC GCATGCGGGGCG TTTTTTTCTGATGCG Bphy_0079 89803 - 89507 - | hypothetical protein TERM 105 89687 - 89647 - G 79 -15.3 -3.01791 | ACGGCGTGCGCAATA GCGTGCGCAGAGCCAGACG CGG CGTCGCGCCCTGCACGCGC AGCGCGCTGAAGAAC Bphy_0080 90294 - 91055 + | phytanoyl-CoA dioxygenase TERM 106 91068 - 91107 + T 73 -12 -3.01924 | gap 1 TGAACCCCTTGTCCC GCCGCTGGC-CGGGGCCGC TAT GCGGCGGCGCGTCAGCGCC TGTTCGACGCGAGTC Bphy_0081 91300 - 91100 - | hypothetical protein TERM 107 91994 - 92014 + G 79 -6.1 -4.63486 | AGTCTGCAGCGCATG GGTCTCGAC TAC GTCGACATC TTTTATTCGCACCGT Bphy_0082 91610 - 92653 + | aldo/keto reductase TERM 108 92705 - 92688 - T 100 -9.8 -5.37043 | opp_overlap 92688 ATGCGAGATAAAAAA GCCGCC CATGTT GGCGGC TTTTTCAATGGTGCG TERM 109 92688 - 92705 + T 87 -9.8 -4.68593 | opp_overlap 92688 ATGCGAGATAAAAAA GCCGCC CATGTT GGCGGC TTTTTCAATGGTGCG Bphy_0083 92947 - 92765 - | hypothetical protein TERM 110 93041 - 93052 + r 71 -7.2 -4.11216 | overlap 93030 GTTTGGCTGGCTGCA GCGC GCCC GCGC TTTTGCCCGTCGCGC TERM 111 93096 - 93143 + r 73 -11.9 -3.07307 | opp_overlap 93089 93088, overlap 93107 93108 GGGACAAGGCTTTGC GCGG-TTCGCACAGCGGCGCAAG GGGG CTCGCGCCGC-GAGCGCGTCCGC TTACGTCGACCTTTC Bphy_0084 94488 - 93217 - | major facilitator transporter TERM 112 93391 - 93402 + gr 74 -7.2 -4.323 | GAGCAGGTACAGCGC GGCC GCCT GGCC TTTTGCCTCTTTCGC TERM 113 94401 - 94362 - GR 73 -12.6 -2.73994 | overlap 94359 ATCCGGCGAACAGCA GCGCGAGACTGGCGCGCC AGTA GGCGCGCGTGCCGCGCTC GAGATATGGCGCGCC Bphy_0085 95173 - 94454 - | hypothetical protein Bphy_0086 95551 - 95763 + | hypothetical protein Bphy_0087 95889 - 96911 + | aminoglycoside phosphotransferase Bphy_0088 97214 - 97378 + | hypothetical protein Bphy_0089 98517 - 97489 - | hypothetical protein TERM 114 97689 - 97656 - GT 78 -9.4 -4.03234 | opp_overlap 97656, overlap 97657 TGCTGCCGATATAAA TCCCTACCGGCCCG TGCAGC CGGGCCAGCTGGGC TTCCGTGAGATCGAA TERM 115 97688 - 97657 - GT 74 -12.9 -3.01726 | opp_overlap 97656, overlap 97656 GCTGCCGATATAAAT CCCTACCGGCCCG TGCAGC CGGGCCAGCTGGG CTTCCGTGAGATCGA Bphy_0090 99071 - 98490 - | carbon monoxide dehydrogenase subunit G TERM 116 98590 - 98605 + gr 80 -10.4 -3.95073 | GACTGGCTTGCAGTG TCGCCG GAAT CGGCGA TTTCTGCCTGTGCGG Bphy_0091 100297 - 99062 - | VWA containing CoxE family protein Bphy_0092 101193 - 100303 - | ATPase TERM 117 101291 - 101269 - R 77 -11.9 -3.61646 | opp_overlap 101271, overlap 101265 AACCCGATAAACGAA GCGGCCCGG ACGCG CCGGGCCTC ATGTCGGTCAAACGC TERM 118 101271 - 101289 + r 71 -13.1 -2.64616 | opp_overlap 101269 101265 CCCGATAAACGAAGC GGCCCGG ACGCG CCGGGCC TCATGTCGGTCAAAC Bphy_0093 102124 - 101327 - | carbon-monoxide dehydrogenase (acceptor) Bphy_0094 104524 - 102137 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 119 103076 - 103123 + g 88 -17.6 -3.12351 | gap 1, opp_overlap 103069 103071, overlap 103072 TTCGAACAGACCCGC GCGTGCGCCCAGCGCGCCCGCGA TGT TCGATGGCGCGA-GGCCGCACGC TTCGATGTAGCACGA TERM 120 103659 - 103686 + g 89 -2.6 -5.40072 | AACGCTTCGGAGCGC TCGGCGGTCC ACTTCACG GGACGGCGGA TTTTTTTCGACGCCC Bphy_0095 105036 - 104536 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 121 105329 - 105346 + r 80 -4.7 -4.92239 | overlap 105322 105321 GACGCAATGAGGGCC GCGTGGC GTGG GCTTCGC TTTTTCGGTTTTTCG Bphy_0096 106821 - 105421 - | amino acid permease-associated region TERM 122 106741 - 106753 + g 74 -4.7 -4.58395 | overlap 106742 AAAGGTGAGATCGAG CGCGC CGA GCGCC TTTTTCAGGCCTGCA Bphy_0097 107615 - 106959 - | two component LuxR family transcriptional regulator TERM 123 107015 - 107041 + g 73 -5.9 -4.4009 | gap 1, opp_overlap 107015 107014, overlap 107018 TCATCACATAAAAGG TG-AGCTCCGCA TTGT TGCGCAGCTTCA TTTTCTCGAGTAGCC Bphy_0098 108543 - 107677 - | histidine kinase TERM 124 108305 - 108357 + g 71 -12.6 -3.18383 | gap 2, opp_overlap 108292 108293, overlap 108306 108310 AAGCGCGCGGCCGTG ACCTCGGCGCCGAGGCTGTCGTGCAG TTC CTGCGCGAC-GCGGCGGCG-CGTGGC TTCCTGCGTGCGCGT TERM 125 108306 - 108356 + g 77 -16.1 -2.50816 | gap 2, opp_overlap 108292 108293, overlap 108305 108310 AGCGCGCGGCCGTGA CCTCGGCGCCGAGGCTGTCGTGCAG TTC CTGCGCGAC-GCGGCGGCG-CGTGG CTTCCTGCGTGCGCG TERM 126 108310 - 108353 + g 74 -15.2 -2.57244 | gap 1, opp_overlap 108292 108293, overlap 108306 108305 CGCGGCCGTGACCTC GGCGCCGAGGCTGTCGTGCAG TTC CTGCGCGAC-GCGGCGGCGCG TGGCTTCCTGCGTGC TERM 127 109023 - 109004 - R 100 -15 -5.61881 | opp_overlap 109004 109018 109020, overlap 109017 CCGCAAAAAGAAAAA CCGGAGCC TAAA GGCTCCGG TTTCCGGTGTTTCGA TERM 128 109004 - 109023 + r 95 -15 -3.695 | opp_overlap 109004 109017, overlap 109018 109020 CCGCAAAAAGAAAAA CCGGAGCC TAAA GGCTCCGG TTTCCGGTGTTTCGA Bphy_0099 109860 - 109090 - | oxidoreductase FAD-binding subunit TERM 129 109914 - 109904 - R 84 -2.4 -5.36441 | overlap 109887 109886 CGGCCACACAAAAAA GCGG GGC CGGC ACGGCAAAGGCGATG Bphy_0100 111022 - 110381 - | lysine exporter protein LysE/YggA TERM 130 111338 - 111356 + r 73 -11.8 -3.06133 | overlap 111341 CCGGCACTTCAGTGG TAATCGGC CGT GCCGATTA TTCCATCGAAAATTA TERM 131 111881 - 111866 - R 70 -11.8 -2.78867 | opp_overlap 111862 111857, overlap 111865 TCAACGCCGAAGAAG GCGCGC GCGA GCGCGC GGGCTACCGTTTGCT TERM 132 111966 - 111930 - R 71 -11.4 -3.17392 | CAGCGCCGAACTCAA CCGGACGCCGCAGCGC GACTG ACGCCGCGGCGCGCGC TCACTCGACGCGCAG Bphy_0102 112764 - 111967 - | endonuclease/exonuclease/phosphatase Bphy_0103 113299 - 112793 - | hypothetical protein Bphy_0104 113629 - 114606 + | ATPase central domain-containing protein TERM 133 114637 - 114650 + F 72 -9.5 -3.73647 | TGAGGCGAACGGGCG GCGCG CAAG CGCGC TTGTTCATGGGTCCA Bphy_0105 114837 - 115124 + | hypothetical protein TERM 134 115241 - 115268 + F 93 -12.7 -4.17296 | opp_overlap 115237 GTTCCCACATATTGA TGCCCGCAGCC GGAACA GTCTGCGGGCA TTTGTGTCTGTGGCG TERM 135 115945 - 115959 + G 75 -9.2 -3.96624 | opp_overlap 115944 115941 GTAGAAGCAATCGAG GCGGTC AAC GGCCGC TTTGTGGTCAAGGTC TERM 136 116367 - 116394 + G 71 -12.6 -3.21099 | TATTCGTCCCAAGCT GTCGGGGCCGGG CGAG CCCGCCGCCGAC TTCCTGATACAAGGG Bphy_0106 115417 - 116523 + | 2-hydroxyglutarate dehydrogenase Bphy_0107 116726 - 117040 + | high potential iron-sulfur protein TERM 137 117153 - 117123 - gf 100 -19.7 -3.58343 | opp_overlap 117123 CGCAGCAGCCGTAAA GAGCGCCCGCCGC GGAGA GCGGCGTGCGCTC TTGTCTTATGAAAGT TERM 138 117123 - 117153 + GF 100 -19.7 -3.75378 | opp_overlap 117123 CGCAGCAGCCGTAAA GAGCGCCCGCCGC GGAGA GCGGCGTGCGCTC TTGTCTTATGAAAGT Bphy_0108 117052 - 117351 + | hypothetical protein TERM 139 117697 - 117720 + GT 75 -9.5 -3.85698 | opp_overlap 117713, overlap 117713 GTTCGGCAGTTCGAC GGCGCTGCT GATCGA AGCCGCGCC TTTCTCGAAGCGCGG TERM 140 117736 - 117713 - gT 73 -11.7 -3.05384 | opp_overlap 117697 117713 GCGCTGCTGATCGAA GCCGCGCCT TTCTCG AAGCGCGGC TTCTATGGCAGTTGG TERM 141 117713 - 117736 + GT 71 -10.2 -3.50447 | opp_overlap 117713, overlap 117697 GCGCTGCTGATCGAA GCCGCGCCTT TCTC GAAGCGCGGC TTCTATGGCAGTTGG TERM 142 117948 - 117976 + GT 74 -11.5 -3.53811 | opp_overlap 117948, overlap 117950 TGCACGCGAAGCAGA CCGCGCGCCGCGC GAC GCTCGGCGAGCTG TTTGCGCACCATAGC TERM 143 117950 - 117974 + GT 79 -12.7 -3.34715 | opp_overlap 117948, overlap 117948 CACGCGAAGCAGACC GCGCGCCGCGC GAC GCTCGGCGAGC TGTTTGCGCACCATA TERM 144 118222 - 118241 + GT 73 -5.6 -4.3586 | GTCGCTGGTCATCAC GCTGGTGG CGAT CTACCCGC TTTTCGTGTGGCTGG Bphy_0109 117293 - 118615 + | general substrate transporter Bphy_0110 120133 - 118619 - | amidase TERM 145 119216 - 119192 - G 70 -7.9 -4.00782 | gap 1, opp_overlap 119191 CCAGATCATCAGAAA CG-CTTCGCG CAGGCT CGCGAAGTCG ATGTTGAGCGTGACG TERM 146 119461 - 119427 - G 85 -16.5 -3.08679 | gap 1 TTGCCCGACGTAAGA TCGAGCAGCAGTGCGC TGTC GCGCAC-GCTGCGCGA CACGGCGTGATCGAC TERM 147 119915 - 119945 + g 72 -8.9 -3.97368 | gap 1, opp_overlap 119885, overlap 119903 119915 119911 119935 119938 CGGCCCGTCGCCGAG C-GCAGCGGCGTCG GGTG CTTCGCCGCTGCCG TTTGTCCGTTCGCGC TERM 148 120258 - 120235 - R 83 -13.8 -3.36803 | opp_overlap 120228 CAATTCGATGCACAA GGCGCGACGC CGGC ACGCCGCGCC TCTAGCGTAACTTAC Bphy_0111 120968 - 120270 - | carboxymethylenebutenolidase TERM 149 121086 - 121066 - H 74 -8.1 -4.25256 | overlap 121063 121067 GTGCCATCAAAAGAA CGGGCCTGC AGC GCGGGGCCG GCGCGGCGGGCTCCT TERM 150 122675 - 122655 - g 72 -11.1 -3.55444 | GTGTGATCGGCGAAA CGACCTTCG ACT CGAAGGGCG ACCTGAAGCACGGTG Bphy_0112 121607 - 122752 + | extracellular ligand-binding receptor TERM 151 122833 - 122858 + F 100 -17.6 -5.18371 | opp_overlap 122830 122833 CAAGGCATCATAGGA GGCACGCGGG TTCATT CCCGCGTGCC TTTTGTTTTGTGCGC TERM 152 122858 - 122833 - f 87 -17.6 -2.67441 | opp_overlap 122833, overlap 122830 CAAGGCATCATAGGA GGCACGCGGG TTCATT CCCGCGTGCC TTTTGTTTTGTGCGC Bphy_0113 122916 - 123914 + | transcription factor jumonji domain-containing protein Bphy_0114 125161 - 123950 - | major facilitator transporter TERM 153 124376 - 124361 - G 71 -11.8 -3.28924 | overlap 124335 CATGCCGCCTGAGAA CGCCGC GTAG GCGGCG CTCGACACAGCGGGC TERM 154 125980 - 125961 - g 74 -11.4 -3.59979 | GTCGGGTAGCCGAAA GCGCGTCG CGTT CGACACGC CAGCTCCCGATTGGG Bphy_0115 125383 - 126048 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Bphy_0116 126407 - 126709 + | histone family protein nucleoid-structuring protein H-NS TERM 155 126706 - 126692 - f 79 -7.2 -4.60487 | opp_overlap 126692 CAGGAGCGGGAAAAA TTTCTC ATC GAGAAA TAATATGACTTAATG TERM 156 126745 - 126785 + F 71 -11.4 -3.22223 | opp_overlap 126749 126754, overlap 126754 GCGCGAGCAATGTGT TAAAGAAAACCGCGCC-CAC ATC GAGAGGCGCGGTTTT-TTTA TTGGTCATCGGCTTA TERM 157 126782 - 126749 - f 71 -10.3 -3.58037 | gap 1, opp_overlap 126745 126754, overlap 126754 GAGCAATGTGTTAAA GAAAACCGCGCC-CAC ATC GAGAGGCGCGGTTTTT TTATTGGTCATCGGC TERM 158 126777 - 126754 - f 95 -10.2 -4.87133 | gap 1, opp_overlap 126745 126754, overlap 126749 ATGTGTTAAAGAAAA CCGCGCC-CAC ATC GAGAGGCGCGG TTTTTTTATTGGTCA TERM 159 126754 - 126777 + F 100 -10.2 -5.84381 | gap 1, opp_overlap 126754 126749, overlap 126745 ATGTGTTAAAGAAAA CCGCGCC-CAC ATC GAGAGGCGCGG TTTTTTTATTGGTCA Bphy_0117 126957 - 128159 + | cation diffusion facilitator family transporter Bphy_0118 128627 - 128169 - | AsnC family transcriptional regulator TERM 160 128641 - 128651 + r 74 -2.4 -4.91459 | AACTGCGCCTCCGTT GTCG CGT CGCC TTTTTATCAATGTTA Bphy_0119 129345 - 128731 - | hypothetical protein Bphy_0120 129986 - 129342 - | beta-lactamase domain-containing protein TERM 161 130120 - 130131 + H 76 -4.4 -4.83269 | opp_overlap 130120 AGTTGAGGTAGAGAA CACA GGAT TGTG TTTTTGGTATAATGT Bphy_0121 130629 - 131228 + | rare lipoprotein A TERM 162 131295 - 131276 - Tf 100 -13.6 -5.00616 | opp_overlap 131276 CGTCTGCTTAAAAAA GGGCTGTG TGCG CACAGCCC TTTTTGCTTTTTCAA TERM 163 131276 - 131295 + TF 100 -13.6 -5.18355 | opp_overlap 131276 CGTCTGCTTAAAAAA GGGCTGTG TGCG CACAGCCC TTTTTGCTTTTTCAA Bphy_0122 132182 - 131307 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 164 132328 - 132366 + GH 76 -13.1 -3.14931 | overlap 132315 132309 132329 132358 GGGGCGGCGTTCGAG GCGCGGGCGCTGACGTT TCTTC AGCGGCAGCGTTTGCGC TTCGTCGCGCGTAAC TERM 165 132329 - 132359 + GH 78 -11 -3.67976 | overlap 132315 132309 132328 132358 GGGCGGCGTTCGAGG CGCGGGCGCTGACG TTT CTTCAGCGGCAGCG TTTGCGCTTCGTCGC TERM 166 132524 - 132539 + GH 93 -5.4 -5.24129 | gap 1, opp_overlap 132513, overlap 132513 AGCAGCAGCGCATCG TGC-GCG CCG CGCAGCA TTTTTTGTCGACGCA Bphy_0123 132181 - 132651 + | hypothetical protein Bphy_0124 132877 - 133464 + | phosphoheptose isomerase Bphy_0125 133485 - 134288 + | transport-associated Bphy_0126 134285 - 134632 + | cytochrome c class I TERM 167 135144 - 135133 - g 86 -3.6 -5.14563 | GTGCTCAGCAAAAAA GGCC CCAA AGCC GCGCAGACCCGCTTC TERM 168 135925 - 135971 + G 79 -11.4 -3.86015 | CACGGCCTGGCCGCG CTCGCGGGCGACCTGATCGCGA TCG TCGCGGTGCTGTTGCTCGCGCG TTTCTGGAGCGACTG Bphy_0127 134929 - 136038 + | hypothetical protein TERM 169 136950 - 136910 - g 77 -13.1 -3.30159 | CGAAGTCTGCGACAA GCTCGACGGCGCAGCCGAC GGC ATCGTCAGCGACGTCGCGC AATGCCGTCAGCACG Bphy_0128 136035 - 137750 + | feruloyl esterase TERM 170 137793 - 137772 - f 70 -3.7 -4.59081 | gap 1 CAAAGTCAGACAAAA CACTGCGGAT GGG AT-CGCGGTG CAAAGCTGTCGCGCA TERM 171 138852 - 138830 - g 81 -3.3 -5.00616 | TCGCGCTGCAAAAAA GCGGTTCGA GCATT TCGACTCGC ATCGCGAGCTAAGGT Bphy_0129 138001 - 138864 + | anti-sigma-factor antagonist Bphy_0130 138874 - 139230 + | anti-sigma-factor antagonist Bphy_0131 139250 - 139675 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Bphy_0132 139660 - 140808 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Bphy_0133 140895 - 142343 + | histidine kinase Bphy_0134 142340 - 143983 + | histidine kinase TERM 172 144293 - 144346 + G 78 -3.8 -4.83169 | gap 2, opp_overlap 144273, overlap 144298 AAGACGGCGATCCGC ATCATGCTCACGTCGCGCCAGCCGAT CTGG ATCGGCTGG-G-GACGGGAGCTTCTC TTTTTCTACAACGAT TERM 173 144298 - 144341 + G 95 -16.9 -4.13816 | gap 2, opp_overlap 144273, overlap 144293 GGCGATCCGCATCAT GCTCACGTCGCGCCAGCCGAT CTGG ATCGGCTGG-G-GACGGGAGC TTCTCTTTTTCTACA TERM 174 147571 - 147616 + G 91 -17 -3.53012 | gap 3 TGTGCGCAACGCGCT CGCGGGC-GTTGCG-CGCGGCGC GAA GC-TCGCGTCGCAACTGCTCGCG TTTGGCCGCAGACAG TERM 175 148859 - 148874 + G 72 -6.8 -4.25283 | overlap 148860 GCCACCGGCCGCGAA TCGCGC CTTC GCGTGA TTTTCGTCACGGGCT Bphy_0135 144107 - 149002 + | multi-sensor hybrid histidine kinase TERM 176 149212 - 149189 - g 81 -13.8 -3.53012 | opp_overlap 149173 149197, overlap 149170 GCGCTGGCCGTCAAA GCCGCCACCG GGCG CGACGGCGGC GCGTCCGTTCTGATC TERM 177 149197 - 149219 + G 75 -12.6 -3.52073 | opp_overlap 149170 149189, overlap 149173 CGTCAAAGCCGCCAC CGGGCGCGAC GGC GGCGCGTCCG TTCTGATCTTCGACG Bphy_0136 149102 - 149725 + | hypothetical protein TERM 178 149784 - 149757 - f 100 -14.2 -5.46629 | overlap 149747 AACAGGCGAAAAAAA TCCGCTCACGCC GGGG AGCATGAGCGGA AAGTCGGAGAGTTAC TERM 179 151542 - 151521 - g 88 -8.7 -4.68384 | gap 1, overlap 151523 AGTCACCCAACAAAA CGCCGCGCTC GTC GAGCA-GGCG GCGGCTGCGGCGGGC Bphy_0137 150067 - 151614 + | methyl-accepting chemotaxis sensory transducer TERM 180 151845 - 151832 - g 75 -3.7 -4.65895 | GCGTCCAGCCAAAAA GCGTC GAAG GGCGC GTCGTCAATATCGAC TERM 181 152634 - 152668 + G 74 -15 -2.63631 | CCTCGACGGCTACAT CGGTCGCGCGTTCATC GGC GATGGACTGGCGACCG TCCTCTCCGGCTTCG TERM 182 152958 - 152982 + G 70 -11.3 -3.36803 | GATCGTCGCGGCCGT GACGCTCGTGC TCG GCGCGGGCGAC TTCTCGCTGAAGTTC Bphy_0138 151789 - 153096 + | uracil-xanthine permease TERM 183 153120 - 153141 + T 100 -14.4 -5.68023 | opp_overlap 153120 ATGCACGAAACGAAA CGGGCGCC CATCGC GGCGCCCG TTTTTTTGCTTCTAC TERM 184 153141 - 153120 - T 100 -14.4 -4.10953 | opp_overlap 153120 ATGCACGAAACGAAA CGGGCGCC CATCGC GGCGCCCG TTTTTTTGCTTCTAC Bphy_0139 154832 - 153168 - | Na+/H+ antiporter TERM 185 154012 - 154064 + g 74 -14.8 -2.57974 | gap 1, overlap 154011 TCGATCATCGTCCAC GTGACGCTCGCTCGCACGCGCGCCT CTGC AGG-GCTCGTGCGCGCGAACGTCGA TAAGTTCATCGTCAT TERM 186 154942 - 154914 - H 72 -8.8 -3.83026 | overlap 154930 154932 TCGCGCGACATGAAA GCGCCGCGTC TGGAAAGAC GATGCGGCGC GTCGGTCAGCCCGAA Bphy_0140 155217 - 156491 + | diguanylate phosphodiesterase TERM 187 156988 - 157005 + G 72 -11.3 -3.55447 | GGTTGCGAATGTCTT GACCTCC GGTG GGAGGTC TTCTGTGCTCGATGC Bphy_0141 156536 - 157225 + | CutC family protein Bphy_0143 161189 - 157599 - | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 188 159052 - 159086 + g 70 -5.7 -4.20918 | overlap 159085 GCGTCGACGCATGTG GCGAGC-GCCGCTGCAT CGA ATGCAACGCCCGC-CGC TTTCTTGAGCTTGCC TERM 189 159935 - 159962 + g 81 -9.2 -4.32857 | gap 1, opp_overlap 159935, overlap 159939 GTGCGACGAGATCAA CCACGCGCTCG CGCCGAT CGAGCGC-TGG TTTGTGTTTCGCGAG TERM 190 160077 - 160095 + g 80 -13.8 -3.31792 | opp_overlap 160070 GCCGAAGATCGCGGG CCGCGCGC CTT GCGTGCGG TTGTACAGATAGTCC TERM 191 161580 - 161563 - H 74 -6.3 -4.43669 | gap 1, overlap 161564 161567 AGCGAAAAAACCAAA GGCATCGC CGT GCGAT-CC AGGCTACCCTAATCG Bphy_0144 161632 - 162249 + | glutathione S-transferase domain-containing protein Bphy_0145 163218 - 162277 - | K+ channel inward rectifier domain-containing protein TERM 192 163247 - 163293 + r 73 -13 -2.85351 | gap 3, opp_overlap 163242 163241, overlap 163275 163277 163280 CGCTGACAAGTGTGT CG-CGCAGCGTCGCGGCG-CGAC CGTA GCCGACGCCGCC-CGCTGCGGCG TGTAGTGTAGCGCGG Bphy_0146 163610 - 163365 - | hypothetical protein TERM 193 163643 - 163677 + r 76 -12.8 -3.05384 | opp_overlap 163640 163639 CAGCAAGACAAGGTC GTAGGCGCGGCGCG CGGCGGA CGCGCCACGTCTGC TTCAATGCGAAAACC Bphy_0147 163953 - 163714 - | hypothetical protein Bphy_0148 165021 - 164095 - | ribokinase-like domain-containing protein TERM 194 164798 - 164752 - G 70 -11.6 -3.36289 | gap 2 CACGACGGCAAGCAA CGGCGCGCGCTCGACACGCTGC ATGAA GC-GCATGTCGAGACCG-GCCG CGACGCTTGCATTCC Bphy_0149 166302 - 165040 - | N-acylglucosamine 2-epimerase TERM 195 166250 - 166222 - G 78 -13.9 -3.24747 | gap 1, opp_overlap 166218 GTGCGACAGCAGGAA CGCCCCGTCGCG GAAGCT CGCGACGGG-CG GCGCCTTGTCATTGG Bphy_0150 167285 - 166299 - | LacI family transcription regulator TERM 196 166359 - 166412 + g 81 -14.4 -3.45118 | opp_overlap 166390 CGGTATGCGGATGTC GAGTGCGGACGGCGTGTCGTCGAG CAGCAA TTCGACGCCGCGCCGCCCGAGCGC TTCCTTGTCGACTGC TERM 197 166724 - 166701 - G 90 -16 -3.61398 | gap 1, opp_overlap 166690 CCCGGCTTCGAAGAA CGCGCGC-CGG TAG CCGAGCGCGCG CTGCGCGATGCTGTA TERM 198 167320 - 167293 - R 78 -6.2 -4.67353 | gap 1, opp_overlap 167313 167317, overlap 167295 GTAGCCATCGAAAAA GACGGCGGCGC AAGCAAG GCGCCGCAG-C GGAGTTCAGGTTCGG TERM 199 167319 - 167295 - R 78 -9.9 -3.95214 | opp_overlap 167313 167317, overlap 167293 AGCCATCGAAAAAGA CGGCGGCGC AAGCAAG GCGCCGCAG CGGAGTTCAGGTTCG TERM 200 167530 - 167472 - R 79 -13.2 -3.19653 | gap 3, overlap 167473 TGATAATTTCATGAA TCGGCGCGGCTCGCGATTGGCGCGTGCGG TGCG CCACACGCGCTAATCGGG-GC-G-GCCGT GAATCCGAATCTGAA TERM 201 167529 - 167473 - R 85 -16.7 -2.51471 | gap 3, overlap 167472 GATAATTTCATGAAT CGGCGCGGCTCGCGATTGGCGCGTGCGG TGCG CCACACGCGCTAATCGGG-GC-G-GCCG TGAATCCGAATCTGA Bphy_0151 169524 - 167683 - | diguanylate cyclase/phosphodiesterase TERM 202 169652 - 169666 + r 87 -7.8 -4.82154 | ACCCATCTGGGGTGG CGTACG ATG CGTGCG TTTTTCCTATGCCTT TERM 203 169729 - 169744 + r 77 -11.8 -3.54543 | opp_overlap 169729 TGAAATAACAACAAA GCCGCC CGCA GGCGGC TTTCCACGACTCACT TERM 204 169744 - 169729 - R 100 -11.8 -4.62803 | opp_overlap 169729 TGAAATAACAACAAA GCCGCC CGCA GGCGGC TTTCCACGACTCACT TERM 205 169806 - 169830 + r 75 -4.2 -4.82901 | gap 1, opp_overlap 169798, overlap 169808 169809 CGAAGCAGGCTTATC GCCGCG-CGAC AGCC GTCGTCGTGCC TTTTTGTGCAGCGCG Bphy_0152 170823 - 169801 - | bile acid:sodium symporter TERM 206 170928 - 170915 - H 75 -5.3 -4.69027 | AAAGCGATTGAAAAA GCAAA TTCA TTTGC CGAATTGATTAATTA Bphy_0153 171381 - 171995 + | hypothetical protein TERM 207 172284 - 172298 + F 71 -7.8 -4.08767 | opp_overlap 172275 172274 TAGAATCCGCGCCCG TCGCGG CGC TCGCGA TTTTGCGGCAATGCG Bphy_0154 172525 - 173628 + | porin TERM 208 173671 - 173697 + F 91 -13.1 -4.09628 | gap 1, opp_overlap 173671 GCGCCGCCTGTCAAA GCCCTG-GTTCC TCGC GGAACGCAGGGC TTGTTCTTTCGGCTG TERM 209 173697 - 173671 - f 81 -13.1 -3.53012 | gap 1, opp_overlap 173671 GCGCCGCCTGTCAAA GCCCTG-GTTCC TCGC GGAACGCAGGGC TTGTTCTTTCGGCTG TERM 210 174647 - 174671 + G 74 -4.9 -4.56597 | overlap 174614 174631 CGGCGAAGGTGCGCT CGTTCGTCGAT TTC ATCGCGGAGCG TTTTTCAAGCGAGCC Bphy_0155 173794 - 174732 + | LysR family transcriptional regulator TERM 211 176254 - 176287 + G 71 -13.1 -3.00766 | gap 1 GCGGCACTCGAGCGG CCGCAACGCGATCGTG CCG CCCGAGCGCG-TGCGG TATCTGTCGGATGTT TERM 212 177252 - 177270 + G 86 -3 -5.12068 | overlap 177242 177241 TTCAGGCGTACTTCG TCGAGCAC GGC GTGCGCAA TTTTTATTCGGTGTC Bphy_0156 174860 - 178243 + | methylmalonyl-CoA mutase, large subunit TERM 213 178260 - 178292 + T 84 -16.3 -2.60392 | opp_overlap 178265, overlap 178265 ATGCCGCCGCAAAAG AAAAAGGCCGCGCGC AAC GCACGCGGCCTTTTC ATTCATTGGAAGGTC TERM 214 178265 - 178287 + T 100 -16.2 -4.4959 | opp_overlap 178265, overlap 178260 GCCGCAAAAGAAAAA GGCCGCGCGC AAC GCACGCGGCC TTTTCATTCATTGGA TERM 215 178287 - 178265 - T 100 -18.4 -5.45802 | opp_overlap 178265 178260 GCCGCAAAAGAAAAA GGCCGCGCGC AAC GCACGCGGCC TTTTCATTCATTGGA Bphy_0157 179265 - 178306 - | 2-nitropropane dioxygenase NPD TERM 216 178973 - 178956 - G 70 -6.3 -4.25104 | gap 1, opp_overlap 178946 GGCTCGTGATGAAAA TCG-GCAC CTT GTGCTCGA CGCAGACGCGGATAT Bphy_0158 179525 - 180415 + | alpha/beta hydrolase fold protein Bphy_0159 180930 - 180445 - | AsnC family transcriptional regulator TERM 217 180876 - 180900 + g 89 -10 -4.56775 | gap 1, overlap 180873 TGCGATCGGTGTCGT CGAGCG-TCGC GGGC GCGGGCGCTCG TTTTTCGGCACCAGT Bphy_0160 181042 - 181941 + | hypothetical protein TERM 218 182081 - 182106 + T 93 -9.7 -4.86385 | gap 1, overlap 182093 CGTCAATATCATTGT GCCGCTCGAACT GAA AGC-CGAGCGGC TTTCTTTTTGCAGGT TERM 219 182093 - 182110 + T 87 -9.9 -4.60041 | overlap 182081 TGTGCCGCTCGAACT GAAAGCC GAGC GGCTTTC TTTTTGCAGGTCCGT Bphy_0161 183093 - 182173 - | beta-lactamase domain-containing protein Bphy_0162 183545 - 183090 - | dehydratase TERM 220 183264 - 183278 + g 82 -4.2 -5.10029 | CATTGTCAGCGTGTC GCCG CTATGCA CGGC TTTTTTCAACTTGAT Bphy_0163 183790 - 183542 - | hypothetical protein Bphy_0164 184320 - 183787 - | YbaK/prolyl-tRNA synthetase associated region Bphy_0165 185268 - 184342 - | pyruvate carboxyltransferase Bphy_0166 186326 - 185385 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_0167 186570 - 187172 + | hypothetical protein Bphy_0168 187427 - 187197 - | hypothetical protein TERM 221 187481 - 187492 + H 74 -2.2 -4.89393 | opp_overlap 187475 CGTGTGAAAGCGACG CTTC GCAA GAGG TTTTTCTAACGTTTC Bphy_0169 187790 - 188815 + | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 222 188863 - 188841 - T 100 -17.8 -4.98531 | opp_overlap 188841 GCGCGAAACGAAAAA GCCGCTTCGA CAT TCGAAGCGGC TTTTTCGTTGGAGGT TERM 223 188841 - 188863 + T 100 -17.8 -4.86621 | opp_overlap 188841 GCGCGAAACGAAAAA GCCGCTTCGA CAT TCGAAGCGGC TTTTTCGTTGGAGGT Bphy_0170 190036 - 188981 - | biotin synthase TERM 224 189676 - 189704 + g 71 -4.5 -4.54727 | gap 1, opp_overlap 189693, overlap 189668 TCGGATTGCGCCACG CGGCGCCCATGC AGAAAC GCGTCG-CGCCG TTTTCCTTTGCGACG Bphy_0171 190792 - 190073 - | dethiobiotin synthase Bphy_0172 191973 - 190789 - | 8-amino-7-oxononanoate synthase TERM 225 191757 - 191781 + g 72 -12.7 -3.09516 | opp_overlap 191744 GATGCGAGCCGCCGC TGCCCGCGCCG TAG CGGCGCGCGCC TTCCGTGATGGCCGC Bphy_0173 193319 - 191973 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 226 192498 - 192480 - G 71 -7.3 -4.19483 | opp_overlap 192480, overlap 192474 CGACAGACACAGAAA GTCCGGC CATAC GCCGGCC TGTTCGCTCGCGAAG TERM 227 193370 - 193338 - R 70 -12 -2.73875 | gap 1, overlap 193323 193348 TGCTCCGGAACATGA GCCGGGCA-AACGCG CGAG CGCGTCGTGCCGGGC GGGCATGTAAAGGGG TERM 228 193800 - 193786 - R 77 -2.7 -5.14563 | CGTGCGACGAAAAAA CGGCG TAGAT CGACG TATGCCTCGACAGGC TERM 229 193866 - 193830 - R 100 -21.7 -5.00138 | overlap 193833 CAGCGAAAGCAAAAA CAATCGCCCGCTGCGCA GTA TGCGCAACGGGCGATTC AGAGATCAGCGGAGA TERM 230 193863 - 193833 - R 100 -23.4 -4.58698 | overlap 193830 CGAAAGCAAAAACAA TCGCCCGCTGCGCA GTA TGCGCAACGGGCGA TTCAGAGATCAGCGG Bphy_0174 195182 - 193893 - | hypothetical protein TERM 231 194315 - 194346 + g 80 -12.3 -3.78934 | gap 1, opp_overlap 194283 194306 ACCACACGCGCACGC CGTCGCG-ATCGCC GACGA GGCGATGCGCGTCG TTCTTGTACGCGCCG Bphy_0175 196191 - 195745 - | hypothetical protein Bphy_0176 197340 - 196210 - | acyl-CoA dehydrogenase domain-containing protein TERM 232 196433 - 196473 + g 72 -11 -3.49951 | opp_overlap 196416, overlap 196434 TGGCCCGCGTCCTTT AGCGAGGCGGCGTGCCAG ATGAG CTGACGCGCCGCTTCGAG TTGTGTCGCCATGTC TERM 233 196434 - 196472 + g 75 -14.5 -2.69649 | opp_overlap 196416, overlap 196433 GGCCCGCGTCCTTTA GCGAGGCGGCGTGCCAG ATGAG CTGACGCGCCGCTTCGA GTTGTGTCGCCATGT TERM 234 196809 - 196822 + g 81 -5.2 -4.87665 | opp_overlap 196798, overlap 196800 TGAACGCGCTGATGC CGCG TTTGCC CGCG TTTTTGTCGGTGACG TERM 235 197336 - 197358 + g 89 -2.6 -5.40004 | opp_overlap 197338, overlap 197338 TGGTCCTGATCGAGC AACATGCGGG TCT CCTGAATGTC TTTTTTCGTTTGATC Bphy_0177 198054 - 197377 - | short-chain dehydrogenase/reductase SDR Bphy_0178 199293 - 198103 - | acetyl-CoA acetyltransferase TERM 236 198466 - 198484 + g 79 -5.8 -4.71061 | overlap 198468 GCCGACGACACGAGC GAGCGGCG TCA CGCCGAGC TTTTTCGCTGTCGAT Bphy_0179 200062 - 199286 - | carbonate dehydratase TERM 237 200108 - 200118 + r 70 -2.4 -4.72272 | overlap 200105 TGTTGTTCAATTGCG GACG GTG CGCC TTTTTCATGCAGCGC Bphy_0180 201931 - 200123 - | (isocitrate dehydrogenase (NADP(+))) kinase TERM 238 200237 - 200254 + g 71 -4.1 -4.57569 | GGGCAACTCGCCACG CAGAATG TAGT CTTTCTG TTTTTGCCACAGTGC TERM 239 200323 - 200304 - G 78 -7.8 -4.37886 | overlap 200306 TGATGCTTGAGAAAA GATTCGCG CACG CGCGGATC GCCGAGCAGGAAGGT TERM 240 200397 - 200359 - G 71 -4.5 -4.56775 | opp_overlap 200359 ACGTCTCCGGAAAAA TGTCGTGCGGGCC GACCGAATACCAA GGCTCGCCCGACA TCTCGTCTTCCTCGT TERM 241 201763 - 201776 + g 71 -8.1 -4.08216 | CATACGACGTGATGC GCTCG CGCG CGAGC TTTTGCAGGCCGTGC TERM 242 202000 - 202022 + r 78 -9.8 -4.07568 | overlap 202001 TGTATCGCCCGGGTG AGCTTGCGAG ACG CTCGCGAGCC TTTTGGGCGCGGCGC TERM 243 202001 - 202021 + r 79 -13.3 -3.04398 | overlap 202000 GTATCGCCCGGGTGA GCTTGCGAG ACG CTCGCGAGC CTTTTGGGCGCGGCG Bphy_0181 202589 - 202155 - | MerR family transcriptional regulator Bphy_0182 202753 - 203823 + | beta-lactamase domain-containing protein TERM 244 203899 - 203870 - T 81 -12.1 -3.78329 | gap 1, opp_overlap 203872, overlap 203872 GCGCACCAACGCAAA CAGCCCGG-CCGCA TCA CGCGGGCCGGGCTT TTTTGATGCGTCGAA TERM 245 203897 - 203872 - T 87 -14.7 -3.47526 | gap 1, opp_overlap 203872, overlap 203870 GCACCAACGCAAACA GCCCGG-CCGCA TCA CGCGGGCCGGGC TTTTTTGATGCGTCG TERM 246 203872 - 203897 + T 100 -14 -5.1675 | gap 1, opp_overlap 203872 203870 GCACCAACGCAAACA GCCCGG-CCGC ATCAC GCGGGCCGGGC TTTTTTGATGCGTCG Bphy_0183 205525 - 203927 - | extracellular solute-binding protein Bphy_0184 206551 - 205739 - | periplasmic binding protein TERM 247 205949 - 205912 - G 75 -3.3 -4.77165 | gap 1, overlap 205913 CGCTCGACAACAAAA TGCGCTCCACGC-GAGTG AGC CACTCGGCGTCGAGATCG AACGAAGGATAGCGC TERM 248 205997 - 205961 - G 75 -14.4 -2.97166 | overlap 205956 ATCGAACGAAGGATA GCGCGACGCGCCCG TCTCGCCCC CGGGCACGTCGGGC AGCGTGTGCCAGTTG Bphy_0185 207325 - 206555 - | short-chain dehydrogenase/reductase SDR Bphy_0186 207982 - 207344 - | DSBA oxidoreductase Bphy_0187 208933 - 208136 - | sporulation domain-containing protein TERM 249 208996 - 208959 - R 82 -6.3 -4.86385 | gap 1, opp_overlap 208969, overlap 208960 208961 ACCTGCAAAAAGAAA TCTGGAATGACCGTCGAT TAT AGCGACGGTCATT-CGGC TCGCGTCCCGAATAC Bphy_0188 210818 - 209034 - | arginyl-tRNA synthetase TERM 250 209103 - 209132 + g 78 -14.3 -3.21099 | CTGACGCGTTGCCGC GAGCAGCGCGATG CGCG CATTGCGCTGCGC TTCGTCGTCGACCAG TERM 251 209892 - 209912 + g 71 -12.5 -3.23395 | GTCGCCGTCGTCGGT GGTGCGCAG CCA CAGCGCACC TTCCTGCTCGTAGGT Bphy_0189 211190 - 211516 + | hypothetical protein TERM 252 211515 - 211567 + T 83 -15 -2.79098 | gap 1, opp_overlap 211531, overlap 211531 TCGTCTGGGGTATCT GACGCGCAA-ACAAAAAGCCCGTCG TGAC CGACGGGCTTTTTTCATTGCGTGGC TGCTTACTGGCTCGC TERM 253 211550 - 211531 - T 100 -15 -5.27938 | opp_overlap 211515 211531 ACGCGCAAACAAAAA GCCCGTCG TGAC CGACGGGC TTTTTTCATTGCGTG TERM 254 211531 - 211550 + T 100 -15 -5.28481 | opp_overlap 211531, overlap 211515 ACGCGCAAACAAAAA GCCCGTCG TGAC CGACGGGC TTTTTTCATTGCGTG Bphy_0190 214676 - 211959 - | methionine synthase Bphy_0191 215808 - 214738 - | homocysteine S-methyltransferase TERM 255 215826 - 215840 + r 100 -12.8 -5.00884 | TCTGATCGGGCTCGT GCCGGC ATG GCCGGC TTTTTTCAGGAAACT TERM 256 216084 - 216060 - R 100 -14.9 -5.1417 | GGATAAAACGAAAAA CCCCGCCTGGC AAT GCCGGACGGGG TCGATGGGGAACGTG Bphy_0192 216381 - 216124 - | hypothetical protein Bphy_0193 217287 - 216499 - | alpha/beta hydrolase fold protein Bphy_0194 218733 - 217504 - | hypothetical protein TERM 257 218031 - 218043 + g 79 -6.2 -4.60487 | overlap 218028 TGGTGATGTCTTCGC CGCG ACGGC CGCG TTTTTCGACGTACTG TERM 258 218485 - 218513 + g 86 -15.2 -3.53811 | overlap 218486 GGCGGGCGACGCTTT GGCGGGCGGCGG CGAAC CCGCCGCCTGCG TTTCGACGCGCTCAG TERM 259 218486 - 218512 + g 87 -18.7 -2.72144 | overlap 218485 GCGGGCGACGCTTTG GCGGGCGGCGG CGAAC CCGCCGCCTGC GTTTCGACGCGCTCA Bphy_0195 219749 - 218859 - | IclR family transcriptional regulator TERM 260 220447 - 220470 + G 74 -5.3 -4.56597 | gap 1 CGCAATCTGATTCCC GCCGAA-CTC GCGAA GGGCTTCGGC TTTTTCCAGAGCAAG Bphy_0196 219910 - 220902 + | fumarylacetoacetate (FAA) hydrolase TERM 261 221491 - 221472 - g 71 -10.6 -3.66178 | TTGCCGAAGGTGAAA CGCCCGCG ATCT CGCTGGCG TCGTCGGCGAAGATC TERM 262 221993 - 222013 + G 72 -11.1 -3.54424 | opp_overlap 222006, overlap 221981 GCTTCGAAGCGTCTG GCGCTCGAT TAC ATCGCGCGC TTTGAGAAGCTGCGC TERM 263 222135 - 222113 - g 75 -12.6 -3.53811 | opp_overlap 222113 222122, overlap 222114 CCCATTGCTCTGAAA GCGGCCGCGC CCG GCACGGCCGA GTTTCGCCGCGCGCT TERM 264 222134 - 222114 - g 78 -16.1 -2.72144 | opp_overlap 222113 222122, overlap 222113 CCATTGCTCTGAAAG CGGCCGCGC CCG GCACGGCCG AGTTTCGCCGCGCGC Bphy_0197 221102 - 222295 + | extracellular ligand-binding receptor Bphy_0198 222377 - 223237 + | enoyl-CoA hydratase/isomerase Bphy_0199 223414 - 224157 + | hypothetical protein TERM 265 224218 - 224177 - f 100 -15.7 -4.16016 | gap 1 GTAGCCGCGAACAAA CGG-GCGGGCGCAACGGCCG CCG CGCCCGACGCGCCGGCACCG CGCTTCGCACCTCCG Bphy_0200 224717 - 225589 + | hypothetical protein TERM 266 225675 - 225636 - f 75 -8.5 -4.03234 | gap 1, opp_overlap 225636 225639 225641, overlap 225638 225641 TGCGCCGCACAGAAA CACGACGGCCCGGCTGGT GACAA ACC-GCCGGGCCGTTCTT CTTTTGTCACCGTAC TERM 267 225636 - 225676 + F 77 -8.3 -4.38712 | opp_overlap 225636 225638 225641, overlap 225639 225641 TGCGCCGCACAGAAA CACG-ACGGCCCGGCTGGT GACAA ACC-GCCGGGCCGTTCTTC TTTTGTCACCGTACC TERM 268 225673 - 225638 - f 74 -11.1 -3.61232 | gap 1, opp_overlap 225636 225639 225641, overlap 225636 225641 CGCCGCACAGAAACA CGACGGCCCGGCTGGT GACAA ACC-GCCGGGCCGTTC TTCTTTTGTCACCGT TERM 269 225639 - 225673 + F 100 -14.4 -4.31397 | opp_overlap 225638 225636 225641, overlap 225636 225641 GCCGCACAGAAACAC G-ACGGCCCGGCTGGT GACAA ACC-GCCGGGCCGTTC TTCTTTTGTCACCGT TERM 270 225670 - 225641 - f 88 -17.2 -2.92495 | gap 1, opp_overlap 225639 225636 225641, overlap 225638 225636 CGCACAGAAACACGA CGGCCCGGCTGGT GACAA ACC-GCCGGGCCG TTCTTCTTTTGTCAC TERM 271 225641 - 225670 + F 100 -17.2 -4.26938 | gap 1, opp_overlap 225641 225638 225636, overlap 225639 225636 CGCACAGAAACACGA CGGCCCGGCTGGT GACAA ACC-GCCGGGCCG TTCTTCTTTTGTCAC Bphy_0201 225714 - 226196 + | rfaE bifunctional protein TERM 272 226197 - 226233 + T 70 -12.1 -2.74501 | opp_overlap 226179 226203, overlap 226198 CGCGCTCAAGGCTGA ACGCAACGACGCGAGCC TGC GGCCCGCGTCGTCGAGC GTTTGCGGCGTTACT TERM 273 226227 - 226203 - T 100 -19.3 -3.18199 | opp_overlap 226197 226198 CAAGGCTGAACGCAA CGACGCGAGCC TGC GGCCCGCGTCG TCGAGCGTTTGCGGC Bphy_0202 226483 - 226244 - | hypothetical protein Bphy_0203 227392 - 226523 - | Baf family transcriptional activator Bphy_0204 228348 - 227389 - | biotin--acetyl-CoA-carboxylase ligase Bphy_0205 228496 - 229635 + | hypothetical protein TERM 274 230005 - 229987 - g 83 -14.6 -3.21276 | overlap 229985 CGGTCTTCGACAACA TCGCGCAG CCG CTGCGCGA GCTCGGCAAGGTGCC Bphy_0206 229632 - 230522 + | ABC transporter related TERM 275 231558 - 231535 - g 81 -13.2 -3.65529 | overlap 231542 231544 AGACGTTCAGCGAAA CACCGAACAG CGTG CTGTTCGGCG CGCCGCACGCGGCAC Bphy_0207 230664 - 231626 + | hypothetical protein Bphy_0208 231645 - 232271 + | hypothetical protein TERM 276 233008 - 233065 + G 80 -16.2 -2.83012 | gap 2, overlap 233027 233048 TTGCCGCGCTCAACC TGC-TG-GCGGCGGGCGCGCTCGCGTCG CTGC CGATGCGCGAGCGCGCGCCGCGCGTGCG TCTGCTGATCGCGTT Bphy_0209 232302 - 233462 + | VanZ family protein Bphy_0210 233608 - 233931 + | putative ferredoxin TERM 277 234049 - 234008 - g 83 -14.9 -3.1855 | opp_overlap 234036 GTGGGCAAGATCGAA GTCGCCGTCGACGCGCCCG ACGC CAGCCGCGACGGCGGCGCC GCACCGCGCGGCATC TERM 278 234290 - 234303 + G 76 -2.3 -4.8622 | overlap 234287 CAGGCCGATCTGCCG CTCGT GCTC GCGGG TTTTTCGTTCGGCAC Bphy_0211 233954 - 234598 + | hypothetical protein TERM 279 234677 - 234659 - f 83 -5.2 -5.00616 | overlap 234660 TCGTGTTGCAAAAAA CCCGCG AAAAACG CGCGGA AACTCAATGACGTAG TERM 280 234896 - 234868 - f 90 -12.4 -4.21908 | gap 1 GACGAGCAGTCAAAA CGACGCCGCATCG CATG CG-TGCGGCGGCG CCTGCCAGTCGGGCA Bphy_0212 234977 - 236206 + | Serine-type D-Ala-D-Ala carboxypeptidase Bphy_0213 236305 - 236574 + | hypothetical protein TERM 281 236631 - 236658 + T 76 -7 -4.46212 | gap 1, overlap 236634 236635 CCGCCTGCGTCGCCG GAAGCTGGACGTG CAA CGCGTCCAG-TCC TTTTGTCCTGGCCGC Bphy_0214 237612 - 236608 - | LysR family transcriptional regulator TERM 282 236635 - 236655 + g 74 -13.3 -3.20028 | overlap 236634 236631 CTGCGTCGCCGGAAG CTGGACGTG CAA CGCGTCCAG TCCTTTTGTCCTGGC Bphy_0215 237711 - 238037 + | hypothetical protein TERM 283 238071 - 238125 + F 88 -14.2 -3.57144 | overlap 238063 238072 TTATTGCTCTCGCGA TCGGCGAGGTGCGCGGGATTTCGGTA AAC TGCCGCAATCATGTGTGCCACGCCGG TTTCACCATCCCCCG TERM 284 238072 - 238124 + F 83 -15.5 -2.74144 | overlap 238063 238071 TATTGCTCTCGCGAT CGGCGAGGTGCGCGGGATTTCGGTA AAC TGCCGCAATCATGTGTGCCACGCCG GTTTCACCATCCCCC Bphy_0216 238110 - 238877 + | lipoate-protein ligase B Bphy_0217 238891 - 239895 + | lipoic acid synthetase TERM 285 239945 - 239930 - f 89 -6 -5.06414 | opp_overlap 239930 CCGCTTGAAGAAAAA GCTCGC GAAA GCGGGC TTTTTTGTTTTCTGA TERM 286 239930 - 239945 + F 100 -8.2 -5.86976 | opp_overlap 239930 CCGCTTGAAGAAAAA GCTCGC GAAA GCGGGC TTTTTTGTTTTCTGA TERM 287 240845 - 240829 - g 71 -7.9 -4.07885 | overlap 240831 CACGCTCGCGCAAAA CACGGCG GCG CGCCGTC TCGCGCTCGGCAGCC TERM 288 240843 - 240831 - g 71 -10.5 -3.63744 | overlap 240829 CGCTCGCGCAAAACA CGGCG GCG CGCCG TCTCGCGCTCGGCAG Bphy_0218 240128 - 241816 + | sodium-dependent inorganic phosphate (Pi) transporter Bphy_0219 242597 - 241824 - | DeoR family transcriptional regulator Bphy_0220 243038 - 243802 + | glycerophosphodiester phosphodiesterase TERM 289 243824 - 243811 - f 76 -4.5 -4.8622 | overlap 243813 GGCCTGAACGAAAAA CGTGC CCGC ACACG CAGACAAAGAAAGAC Bphy_0221 243893 - 244990 + | extracellular solute-binding protein TERM 290 245221 - 245233 + G 86 -6.9 -4.93696 | CATCTGGACGTGGAT CGGCG TGA TGCCG TTTTTCCTCTTTGCG Bphy_0222 245099 - 246043 + | binding-protein-dependent transport systems inner membrane component Bphy_0223 246040 - 246831 + | binding-protein-dependent transport systems inner membrane component Bphy_0224 246852 - 247931 + | spermidine/putrescine ABC transporter ATPase subunit TERM 291 247996 - 247952 - f 75 -10.8 -3.67775 | opp_overlap 247952 247956 247971, overlap 247965 247995 AGCCTTATGCAACAA GGCGTTCGGAAATCCGGA CGTCTGGAT TCCGGATTTCCGGAAACC CGGAAGTCCGCGTCC TERM 292 248109 - 248090 - f 76 -4.8 -4.85782 | overlap 248092 CCTTGCAAAAAGAAA GCGCGGCC GCAA GGCCGATC AACTACAAAGCAAGC TERM 293 248951 - 248923 - g 74 -14.5 -2.53715 | overlap 248922 GGCATCATCACGAAG CTCGCGCCGATCG GTG CGTTCGGCGCGAT GGCGTTCACCATCGG Bphy_0225 248341 - 249621 + | sodium:dicarboxylate symporter TERM 294 249662 - 249630 - g 83 -14.7 -3.21912 | overlap 249631 249648 GGTCTAAGCGATGAA GGCGGCGGCGCGGCA ACA TGGCGCGTCGCCGCA CGCTACGCAAGCAAC TERM 295 249661 - 249631 - g 86 -18.2 -2.52933 | overlap 249630 249648 GTCTAAGCGATGAAG GCGGCGGCGCGGCA ACA TGGCGCGTCGCCGC ACGCTACGCAAGCAA TERM 296 250337 - 250372 + G 81 -3.3 -5.00895 | gap 1, overlap 250338 250341 AGGGCGCCGATGCGT CCGAGCCGATGATCGT GACCG ACGATCAT-GGCGTGA TTTTTCTCTCCTCGG TERM 297 251441 - 251473 + G 77 -5.4 -4.60255 | overlap 251471 CCGTGAGCGACAACG GTCCCGGCATTCCC GACGA GGTATTGCCGCGGC TTTTTGAGCCCTTCT Bphy_0226 249625 - 251676 + | integral membrane sensor signal transduction histidine kinase TERM 298 252042 - 252023 - g 76 -9.2 -4.1899 | TGACTTCATCGAAAA GCCGTTCG CTTC CGAGCGGC TGATCGAAACCGTGC TERM 299 252666 - 252686 + G 71 -10.4 -3.64283 | overlap 252670 CCGCCGCTGTCCGAG CGGCGCGA GGACA TCGTGCCG TTGTTCGAGCATTTC Bphy_0227 251706 - 253064 + | two component, sigma54 specific, Fis family transcriptional regulator Bphy_0228 253673 - 253149 - | redoxin domain-containing protein TERM 300 254155 - 254192 + G 80 -11.9 -3.74693 | gap 1, opp_overlap 254163, overlap 254156 254159 GGCACGGTGATGCTG CCAAGCGACGACCCGCAG ATG CAGCGGGTCG-CGCTCGA TTTCCTGCGCTCGGG TERM 301 254156 - 254191 + G 80 -15.4 -2.84602 | gap 1, opp_overlap 254163, overlap 254155 254159 GCACGGTGATGCTGC CAAGCGACGACCCGCAG ATG CAGCGGGTCG-CGCTCG ATTTCCTGCGCTCGG TERM 302 254159 - 254188 + G 78 -15.7 -2.67981 | gap 1, opp_overlap 254163, overlap 254156 254155 CGGTGATGCTGCCAA GCGACGACCCGCAG ATG CAGCGGGTCG-CGC TCGATTTCCTGCGCT TERM 303 254185 - 254163 - g 73 -14.8 -2.52676 | opp_overlap 254159 254156 254155 GATGCTGCCAAGCGA CGACCCGCAG ATG CAGCGGGTCG CGCTCGATTTCCTGC Bphy_0229 253846 - 254454 + | hypothetical protein TERM 304 254549 - 254573 + T 90 -11.5 -4.26202 | CACGGAACTTTTTTT GTTACCCACAG GAT CTGTGGATAAC TTTGTTAGTAACTCT TERM 305 254743 - 254767 + T 70 -2.1 -4.85599 | opp_overlap 254749, overlap 254746 254748 254749 GCTGCCCGAAAATGT GCATAAGTCAA GTC TTGACATGTTC TTTTTGTCGAATGCG Bphy_0230 256241 - 254787 - | Mg chelatase, subunit ChlI TERM 306 255437 - 255399 - G 71 -8.1 -4.1673 | gap 1, overlap 255419 255420 CAATTCGTCAAGAAA CAGCACGCCGAGAT-GCG AAAG CGTGATCTCGCCGGGCTG GGGCGGATTGCGTCC TERM 307 257528 - 257517 - g 70 -5.8 -4.27297 | GGAACAATAAAAATA CCGT TATG ACGG AGCCATTTACAAATC TERM 308 257777 - 257765 - g 81 -9.1 -4.28791 | AACCTAGAATATAAA CGTCG CCT CGACG CGACCATAAAGTTTG Bphy_0231 256256 - 258205 + | hypothetical protein TERM 309 258250 - 258217 - g 71 -4.5 -4.48072 | gap 1, opp_overlap 258218, overlap 258218 ATAGCCAGCATAAAA TTAGTCGATCCGAGCG GTT CGCGCCG-TCGACTAT TAATATGCTTCTAAC Bphy_0232 258183 - 260423 + | hypothetical protein Bphy_0233 260413 - 261009 + | hypothetical protein Bphy_0234 261016 - 262260 + | hypothetical protein Bphy_0235 263497 - 262310 - | hypothetical protein TERM 310 265881 - 265894 + G 93 -5.2 -5.44119 | opp_overlap 265881 TGCCGTGAATGAAAC GGGC GAGATG GCCC TTTTTTTCGCGTCGC Bphy_0236 263893 - 266946 + | hypothetical protein TERM 311 267433 - 267452 + G 81 -12.2 -3.84873 | overlap 267447 AGCGTATCGCGGAGG TTGCCGGA GACT TCCGGCAA TTGTTGCTGTTGTCT TERM 312 268215 - 268193 - g 70 -7.7 -4.06502 | gap 1, opp_overlap 268193 268192 268188 CACGGTCAAACGAAA CCGCGAT-GC TGCC GCTACCGCGG ACATCGTGGATCTGT Bphy_0237 266943 - 269915 + | SNF2-related protein Bphy_0238 270908 - 269916 - | hypothetical protein Bphy_0239 272640 - 270901 - | NERD domain-containing protein TERM 313 272105 - 272130 + g 82 -6.8 -4.68593 | CGCTCAAGCTTGCCA GCCTTCCCTG GAAATG CGGTGAAGGC TTTTTCGATCATCCG Bphy_0240 278936 - 272643 - | helicase superfamily protein TERM 314 272881 - 272901 + g 71 -3.9 -4.57837 | overlap 272883 272899 GACTCTTCCACACGC GTGAACATG TGC CATGTCCCC TTTTTAAAAGGGTAT TERM 315 275600 - 275585 - G 80 -4.6 -4.77036 | overlap 275564 TTCGAGTACGAAAAA CCGTGT CTTT ACGCGG ATCGAGTAGCGCGGT TERM 316 277698 - 277722 + g 83 -2 -5.14563 | gap 1, opp_overlap 277694 277693, overlap 277693 277692 AAGAGGCAAATCGCC GGAC-CCCGAC GGAC GTCGGGCGAAC TTTTTTCCTCGAAGA TERM 317 279203 - 279190 - R 74 -8.1 -4.13304 | overlap 279192 AAATCATTTCCAAAA GAGCG CGGA CGCTC GCCGTCTAGATGCCG Bphy_0241 279430 - 279209 - | phage transcriptional regulator, AlpA Bphy_0242 279867 - 280988 + | integrase family protein Bphy_0243 281394 - 281735 + | hypothetical protein TERM 318 281907 - 281878 - f 85 -9.4 -4.43844 | opp_overlap 281884, overlap 281884 TGACGAGTCAGAAAA CAAAAACCGGCC TAAGTG AGCCGGTTTTTA ACGAGAATTGGTGGA TERM 319 281901 - 281884 - f 95 -6.2 -5.54907 | opp_overlap 281884, overlap 281878 GTCAGAAAACAAAAA CCGGCC TAAGTG AGCCGG TTTTTAACGAGAATT TERM 320 281884 - 281901 + F 75 -5.5 -4.57341 | opp_overlap 281884 281878 GTCAGAAAACAAAAA CCGGC CTAAGTGA GCCGG TTTTTAACGAGAATT TERM 321 282303 - 282277 - f 81 -8.8 -4.29738 | opp_overlap 282277, overlap 282279 CTAGACGCAGTAAAA TACATCAACTTG ATG CAAGTGGATGCA TTCGCTCATGACTCG TERM 322 282301 - 282279 - f 72 -9.2 -3.74902 | opp_overlap 282277, overlap 282277 AGACGCAGTAAAATA CATCAACTTG ATG CAAGTGGATG CATTCGCTCATGACT TERM 323 282549 - 282507 - f 70 -2.6 -4.77157 | gap 1, opp_overlap 282515 282538, overlap 282509 282511 282512 CTAACCGAGCAAAAA GATAGGAATGCGCGCGGCG ATATTA CGCGGCTCGCATTC-TGGC GAATTATCAACATAC TERM 324 282545 - 282512 - f 70 -12.4 -2.74018 | opp_overlap 282515 282538, overlap 282511 282509 282507 CGAGCAAAAAGATAG GAATGCGCGCGGCG ATATTA CGCGGCTCGCATTC TGGCGAATTATCAAC TERM 325 282666 - 282684 + G 81 -3 -5.0133 | GTTGATCCGCAACTC GTTGACGG TGA CTGGCGAC TTTTTTGCCCGGATA TERM 326 282940 - 282926 - g 93 -3.5 -5.31275 | CTCCAGGACAAAAAA TCCCG CAGAT CGGAA AGCTGTCATTCGTCA TERM 327 283391 - 283404 + G 78 -4.5 -4.84527 | TCACAGCCTGGGTTG GACTC TAGA GGGTC TTTTTGCTCTCTGCG TERM 328 285670 - 285658 - g 75 -4.1 -4.6821 | overlap 285659 AACGTGAACAGAAAA CCATG GCG CATGA GTTTGCAGCACTGAA TERM 329 286182 - 286171 - g 87 -5.8 -5.03715 | AGTACGCGGAAAAAA GCAC GGAT GTGC GAACCATCGAAATCG Bphy_0244 282639 - 286271 + | hypothetical protein Bphy_0245 286279 - 287766 + | hypothetical protein TERM 330 292209 - 292173 - g 72 -3.6 -4.68593 | gap 1 TTGACGAGGCAAAAA TCCTGAGCACCGGTGGT GGTG ACC-CGGATGCACCGGA TCGCATCCTGAATCT Bphy_0246 287759 - 292492 + | hypothetical protein Bphy_0247 293647 - 292826 - | hypothetical protein Bphy_0248 294657 - 294196 - | hypothetical protein TERM 331 294768 - 294756 - H 82 -6.3 -4.80882 | ACTGTAGAGGAAAAA TGCAT GGG ATGCA AGTAGCCATGGAGTG Bphy_0249 294863 - 295270 + | XRE family transcriptional regulator TERM 332 295332 - 295321 - f 83 -4.4 -5.08824 | TTCCCACCCAAAAAA CTGT TCGA ACAG AAGGAAAGAGTCGAA TERM 333 295750 - 295762 + G 80 -4.7 -4.80178 | CTGGAAAAAAAGCGT GGGCG ACT CGACC TTTTCTTGATTGATC TERM 334 295829 - 295813 - g 78 -4.3 -4.84146 | ACGATAGAAAATAAA GCGGGAG CTT CTCTCAC TGAGGCACAGTTAAG TERM 335 296703 - 296719 + G 79 -4.4 -4.8622 | ATCTCAACTCAATTC TGCTAG ACGGG CTGGCA TTTTTAATTGAACAG Bphy_0250 295405 - 296730 + | hypothetical protein Bphy_0251 297155 - 297871 + | hypothetical protein Bphy_0252 298133 - 297861 - | XRE family transcriptional regulator Bphy_0253 298229 - 298702 + | hypothetical protein TERM 336 298791 - 298763 - T 85 -16.8 -2.59431 | overlap 298759 298780 CGTGTGCACAACTGA GCTGTCCACACC ACAAG GGCGTGGACAGC CGCCTTCGGCGGTTC Bphy_0254 299122 - 298886 - | Mg chelatase, subunit D/I family protein Bphy_0255 299477 - 299223 - | hypothetical protein TERM 337 299725 - 299693 - H 84 -6.9 -4.77567 | overlap 299695 ATGCGGACAAGAAAA CGCGCCAAGCCTTGT GCC ACAAGCGTCGGCGAG AGTTTGCCATCAAAT Bphy_0256 299890 - 300228 + | nitrogen regulatory protein P-II Bphy_0257 300255 - 301760 + | ammonium transporter TERM 338 301813 - 301831 + F 100 -13.1 -5.14563 | AGCGCAGCGACTTTG GCCCGCC TTCAC GGCGGGC TTTTTTCATGCCGCG Bphy_0258 302014 - 303303 + | glutamate--cysteine ligase TERM 339 303403 - 303442 + F 72 -9.3 -3.70902 | gap 3 GACAAGAACTTCGGC GGCAG-CACG-CGCGGGCGG ATG CC-CCTGCGACGCGTCTGCC TTTCGCTATAACGAA Bphy_0259 303493 - 304449 + | glutathione synthetase Bphy_0260 304730 - 305227 + | PTS system fructose subfamily IIA component Bphy_0261 305289 - 305558 + | phosphotransferase system, phosphocarrier protein HPr TERM 340 305588 - 305617 + F 100 -15.8 -4.07568 | opp_overlap 305593, overlap 305593 CATTCGTTTTGACTG GAAGACGCCGCG CGATGT CGCGGCGTTTTC TTTTGGCCGGCCGCA TERM 341 305593 - 305612 + F 100 -12.1 -5.07652 | opp_overlap 305593, overlap 305588 GTTTTGACTGGAAGA CGCCGCG CGATGT CGCGGCG TTTTCTTTTGGCCGG TERM 342 305612 - 305593 - f 73 -12.1 -3.05844 | opp_overlap 305588 305593 GTTTTGACTGGAAGA CGCCGCG CGATGT CGCGGCG TTTTCTTTTGGCCGG TERM 343 306561 - 306533 - g 72 -6.7 -4.2349 | gap 1, opp_overlap 306552, overlap 306534 CCGGCAGAGCGAAAA GGCGCTGGAAGC GCGCAA GCTGC-AGCGCC TGAAGTTCTCGCCGA TERM 344 306653 - 306689 + G 72 -6.5 -4.23674 | gap 1, overlap 306641 GCAGGCCGCGCTCGA CGCGG-GCGCGACAGG GATCGG CCTGTTCCGCACCGAG TTTCTGTTCATGAAC Bphy_0262 305778 - 307520 + | phosphoenolpyruvate-protein phosphotransferase Bphy_0263 308326 - 307568 - | UBA/THIF-type NAD/FAD binding protein TERM 345 308409 - 308455 + r 79 -13.6 -3.05715 | opp_overlap 308411 TAATCGCGCGAGGGA AAGTGTCTTCGCGGCGCGCGGT GGC GCAATGCGCCGCGAAGACACGG TTACGTCAGAAGCTT TERM 346 308453 - 308411 - R 100 -19.9 -3.64822 | opp_overlap 308409 ATCGCGCGAGGGAAA GTGTCTTCGCGGCGCGCGG TGGCG CAATGCGCCGCGAAGACAC GGTTACGTCAGAAGC Bphy_0264 310061 - 308469 - | carboxyl-terminal protease TERM 347 309751 - 309775 + g 72 -13.5 -3.13639 | overlap 309750 309755 TGCGAGATTTCGATG CCGAGGCCCGC GAA GCGGCCCTTGG TCTGTTCCTGCAGTT TERM 348 310029 - 310007 - G 79 -6.8 -4.57569 | opp_overlap 310025 GCAGGGTGGCAAAAA CGCCGGTAGC CAG GCCCGCGGCG ATAAGGCCGATATTT TERM 349 310266 - 310250 - g 79 -5.7 -4.59773 | overlap 310252 CCGCAGCGCCAAAAA GTGCCGC CGC GCAGCGC GTGAAACGCGTGAAA Bphy_0265 310206 - 310499 + | hypothetical protein Bphy_0266 311264 - 310518 - | phosphoglycerate mutase 1 family protein TERM 350 311412 - 311422 + G 77 -5.4 -4.59853 | TTTTTTCCGGCGGAT CTTC CGT GAAG TTTTTCACCGATTAC Bphy_0267 311357 - 311842 + | rhodanese domain-containing protein Bphy_0268 311854 - 312102 + | glutaredoxin 3 TERM 351 312162 - 312116 - f 75 -10.7 -3.6502 | gap 1, overlap 312118 GACGTCGGAGCGAAA CACCGCTTGCGCGCCGCGTCGA TCGG TCGTCGCAGCGCGCG-GCAGCC AATAAGATGAAGGCC TERM 352 312160 - 312118 - f 87 -15.5 -3.40597 | gap 1, overlap 312116 CGTCGGAGCGAAACA CCGCTTGCGCGCCGCGTCGA TCGG TCGTCGCAGCGCGCG-GCAG CCAATAAGATGAAGG Bphy_0269 312296 - 312766 + | protein-export protein SecB TERM 353 312938 - 312919 - g 95 -12.1 -4.27617 | opp_overlap 312919 CACATCGCACGAAAA CGCCCGC TATCTG GCGGGCG TTGCGTTGCCCTCCA TERM 354 312919 - 312938 + G 74 -12.8 -3.18274 | opp_overlap 312919 CACATCGCACGAAAA CGCCCGCT ATCT GGCGGGCG TTGCGTTGCCCTCCA Bphy_0270 312788 - 313786 + | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) TERM 355 314488 - 314443 - g 100 -21.3 -3.29144 | gap 2 GCATGCGCGCTACAA GGCGGAGTTC--GGGCGGCGC GTTCAG GCGCCGCCCTCGAACCCCGCC TGACGCCACGCCTCG Bphy_0271 313940 - 314491 + | appr-1-p processing domain-containing protein Bphy_0272 314934 - 314464 - | RNA methyltransferase Bphy_0273 315758 - 314952 - | putative competence protein F-related protein TERM 356 315135 - 315108 - G 95 -16.4 -3.96148 | gap 1, opp_overlap 315093 315133 TGTCGCCACGACAAA TGCGCGGCCGACA TTT TGTCGGC-GCGCA TCGAGATCGAGCTTC Bphy_0274 315848 - 316807 + | methyltransferase type 11 Bphy_0275 317078 - 317572 + | hypothetical protein TERM 357 318482 - 318470 - g 78 -3.3 -4.9645 | overlap 318471 ACCAGAAGAAGAAAA TGGCC GCC GGTCA GGACGACCCGAACAA Bphy_0276 317629 - 319302 + | cytochrome c oxidase, subunit II Bphy_0277 319348 - 320961 + | cytochrome c oxidase, subunit I Bphy_0278 321059 - 321196 + | hypothetical protein Bphy_0279 321249 - 321860 + | cytochrome c oxidase assembly protein CtaG/Cox11 TERM 358 322033 - 322059 + G 81 -9.3 -4.26076 | overlap 322037 322048 ATCCGCTTCACGTGA TCGCCGCGGCG CTGAT CGGCGCAGCGA TTTTCATCGGCGTGC Bphy_0280 321900 - 322106 + | hypothetical protein Bphy_0281 322264 - 323121 + | cytochrome c oxidase subunit III TERM 359 323210 - 323243 + T 83 -15.3 -2.77899 | gap 1, opp_overlap 323202 323212, overlap 323213 GGAAGAAGTCGTAGA CAGCGCCGCCCTCGAC CCA GTCC-GGGCGGCGTTG TGCTTGATGGGACGG TERM 360 323213 - 323240 + T 83 -13.4 -3.54029 | gap 1, opp_overlap 323202 323212, overlap 323210 AGAAGTCGTAGACAG CGCCGCCCTCGAC CCA GTCC-GGGCGGCG TTGTGCTTGATGGGA Bphy_0282 323564 - 323355 - | hypothetical protein Bphy_0283 323652 - 324419 + | hypothetical protein Bphy_0284 324480 - 325151 + | hypothetical protein Bphy_0285 325203 - 326312 + | cytochrome oxidase assembly Bphy_0286 326318 - 327223 + | protoheme IX farnesyltransferase TERM 361 327245 - 327261 + G 87 -15.1 -3.56972 | opp_overlap 327240, overlap 327246 GCTCACTGAACGGTT CGCGCGC GCG GCGCGCG TTGCTTTCGTCGCGT Bphy_0287 327228 - 327845 + | electron transport protein SCO1/SenC TERM 362 327905 - 327876 - T 76 -13.7 -2.76261 | opp_overlap 327881, overlap 327881 GCCGAACGCTGAAAC GAAAAGGCTGCAC GCGC GTGCAGCCTTTTT CTTTTGGACGCCCCA TERM 363 327881 - 327900 + T 100 -13.6 -5.45802 | opp_overlap 327876 327881 ACGCTGAAACGAAAA GGCTGCAC GCGC GTGCAGCC TTTTTCTTTTGGACG TERM 364 327900 - 327881 - T 100 -13.6 -4.55128 | opp_overlap 327881, overlap 327876 ACGCTGAAACGAAAA GGCTGCAC GCGC GTGCAGCC TTTTTCTTTTGGACG Bphy_0288 328213 - 327923 - | YCII-related Bphy_0289 328433 - 330229 + | methyl-accepting chemotaxis sensory transducer TERM 365 330254 - 330271 + F 100 -9.8 -5.26119 | overlap 330258 CGATCGATCATCCAG GGCCGC CGCTGT GCGGCC TTTTCTTTTTCGGAC TERM 366 330258 - 330270 + F 75 -10.5 -3.74587 | overlap 330254 CGATCATCCAGGGCC GCCGC TGT GCGGC CTTTTCTTTTTCGGA Bphy_0290 330475 - 331287 + | YaeC family lipoprotein TERM 367 331339 - 331318 - T 100 -15.1 -4.17089 | opp_overlap 331318 CGCAAACTCGGAAAA GCGCCACGG GGAA CCGCGGCGC TTTTTTTATGCGCGG TERM 368 331318 - 331339 + T 100 -12.9 -5.60993 | opp_overlap 331318 CGCAAACTCGGAAAA GCGCCACGG GGAA CCGCGGCGC TTTTTTTATGCGCGG Bphy_0291 332301 - 331378 - | MarR family transcriptional regulator Bphy_0292 332679 - 333413 + | GntR family transcriptional regulator Bphy_0293 333493 - 334596 + | N-acetylglucosamine-6-phosphate deacetylase TERM 369 335470 - 335501 + G 82 -7.2 -4.65722 | gap 1, overlap 335470 335472 335473 GCTCGTATCGACGGC GCA-CGCGGCGCTCG ATC CGATTGCCGCGATCC TTTCTTTCTATGTGA Bphy_0294 334589 - 335596 + | glutamine--fructose-6-phosphate transaminase (isomerizing) TERM 370 336896 - 336846 - g 72 -11.7 -3.53012 | opp_overlap 336854, overlap 336847 GGCGTGCTGTCGAAA GTCGATGACGCGCTGCTCGCCGA ACGTG CCGCCGACCTGCGCGACATCGAG AAGCGCGTGTTGCGC TERM 371 336895 - 336847 - g 75 -15.2 -2.71712 | opp_overlap 336854, overlap 336846 GCGTGCTGTCGAAAG TCGATGACGCGCTGCTCGCCGA ACGTG CCGCCGACCTGCGCGACATCGA GAAGCGCGTGTTGCG TERM 372 337288 - 337250 - g 72 -13 -3.17075 | overlap 337269 CGTGCGCGAAGCGAA CCGTCGTACGTCGCAGCA AGC CGCCGCGACCAGCGACGG CCGCGCGATCGAAGT Bphy_0295 335610 - 338195 + | phosphoenolpyruvate-protein phosphotransferase Bphy_0296 338304 - 340070 + | PTS system, N-acetylglucosamine-specific IIBC subunit TERM 373 340129 - 340103 - T 71 -10 -3.53012 | opp_overlap 340106, overlap 340105 340106 GTCTTCGTCGCTAAA GAGCCGGCGCCC TCG AGGCGCCGGTTT CTATTTGCGGCTCAG TERM 374 340127 - 340105 - T 79 -12.6 -3.34398 | opp_overlap 340106, overlap 340103 340106 CTTCGTCGCTAAAGA GCCGGCGCCC TCG AGGCGCCGGT TTCTATTTGCGGCTC TERM 375 340106 - 340126 + T 100 -15.4 -4.33258 | opp_overlap 340105 340103 340106 TTCGTCGCTAAAGAG CCGGCGCC CTCGA GGCGCCGG TTTCTATTTGCGGCT TERM 376 340126 - 340106 - T 84 -16.1 -2.60496 | opp_overlap 340106, overlap 340105 340103 TTCGTCGCTAAAGAG CCGGCGCCC TCG AGGCGCCGG TTTCTATTTGCGGCT Bphy_0297 340260 - 340141 - | cyd operon protein YbgT Bphy_0298 341408 - 340272 - | cytochrome d ubiquinol oxidase, subunit II TERM 377 340872 - 340854 - G 88 -17.4 -3.15544 | TTTCATCTTGACGAA CGCCGCGC CGT GCGCGGCG AGCATCGACACGCTC Bphy_0299 343024 - 341435 - | cytochrome bd ubiquinol oxidase subunit I Bphy_0300 343286 - 343014 - | hypothetical protein TERM 378 343520 - 343546 + r 83 -14.5 -3.05022 | gap 1, opp_overlap 343520 ATCAGAAGATAAAAA GCCCCGC-CTTC TTGC GAAGAGCGGGGC TCTGTCTGTAACGGG TERM 379 343546 - 343520 - R 100 -14.5 -5.16133 | gap 1, opp_overlap 343520 ATCAGAAGATAAAAA GCCCCGC-CTTC TTGC GAAGAGCGGGGC TCTGTCTGTAACGGG TERM 380 343616 - 343628 + r 76 -4.7 -4.78572 | overlap 343617 343624 TACGCGTATTCGGCC AGCGC GGT GCGCA TTTTCTTCATTGCGC Bphy_0301 344535 - 343600 - | RNA polymerase, sigma 32 subunit, RpoH Bphy_0302 344862 - 345461 + | hypothetical protein Bphy_0303 345507 - 345890 + | hypothetical protein TERM 381 345949 - 345974 + T 88 -13.3 -3.69354 | TGAGCGGTCCATGCG CGCCGGCGA CGGGTGAA TCGCCGGCG TTTGCGCTTCTGCGG Bphy_0304 347675 - 346020 - | 2-isopropylmalate synthase TERM 382 347179 - 347232 + g 73 -12.4 -3.30203 | gap 3 GTCCAGTGCGTCTGC GG-GC-GGGCGTCGGCGTGCTCGCGGA TGA TCCGCGTGC-CTTCGACGGCCAGCGCC TTCACTTCTTCCTGC TERM 383 347470 - 347431 - G 84 -13 -3.73072 | gap 1, opp_overlap 347431 347436 AACTTCCGGACGAAA TCGAAGTCGGTTT-GCGAC GCC GACGGGAAACCGACTTCGA TCTCCTTGAAACCAG TERM 384 347824 - 347806 - R 88 -11 -4.20367 | GGCGCGAACAAACAA CGTCATCG GAA CGACGACG AAGGCAACGATCGAT Bphy_0305 349163 - 348195 - | glycosyl transferase family protein Bphy_0306 349409 - 350107 + | fumarylacetoacetate (FAA) hydrolase TERM 385 350740 - 350707 - g 70 -11.7 -3.32844 | opp_overlap 350707 GCCCCTATCCGACAA TCCGGCGCATTTGCG ATTA CGCAAACTCGCTGGA TGCGTTCGCGCGCGC Bphy_0307 350142 - 350786 + | maleylacetoacetate isomerase TERM 386 350838 - 350862 + T 70 -5 -4.49756 | opp_overlap 350838 350840, overlap 350833 GCAAGCAATAAAAAA GGGCGTCA GGCGACCGA TGACGCTC TTTTCGTATTTCGCC TERM 387 350862 - 350838 - T 86 -2.8 -5.5604 | opp_overlap 350838 350833, overlap 350840 GCAAGCAATAAAAAA GGGCGTCA GGCGACCGA TGACGCTC TTTTCGTATTTCGCC Bphy_0308 352078 - 350900 - | signal recognition particle-docking protein FtsY TERM 388 351564 - 351616 + g 81 -12 -3.85817 | gap 1, overlap 351562 351607 AGGTCGACGAGCAGC GTGCGCAGCGCGCTCTTTACCTGCT GCGG ATC-GGTGAGGCGCTCGCTGCGTAC TTTCTCGCGCAGCGT TERM 389 352454 - 352432 - g 77 -12.6 -3.57144 | overlap 352435 TTCTGCACGCGCAAA GAGCGCGCCC TCC GGGCGCGGCC AGGCGCACACAATCC TERM 390 352451 - 352435 - g 74 -15.1 -2.61695 | overlap 352432 TGCACGCGCAAAGAG CGCGCCC TCC GGGCGCG GCCAGGCGCACACAA Bphy_0309 352403 - 353017 + | methyltransferase Bphy_0310 353135 - 353641 + | pantetheine-phosphate adenylyltransferase Bphy_0311 353788 - 354045 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 391 354066 - 354094 + T 100 -17.5 -5.20333 | TAGTCTGGCTGAATG CGGCACCGCGT GTAATCG ACGCGGTGCCG TTTTTGTTATCGCTG Bphy_0312 355206 - 354115 - | histidinol-phosphate aminotransferase Bphy_0313 355848 - 355246 - | aminoacyl-tRNA hydrolase TERM 392 355670 - 355613 - G 71 -7.8 -4.18702 | AGAATCTTGAAGAAA TGCGCGAGCGCGACGACGGAT-TGACCC GAGC GGTTCATATACGTCATCG-GTTCGAGCA GATGCACTTCTTCGC TERM 393 355924 - 355901 - R 100 -15.2 -5.87688 | opp_overlap 355901 ATAAGCGAAAAAAAA CCCGCCGGGG CGAA CCGCGGCGGG TTACGTCGACCGTTC TERM 394 355901 - 355924 + r 85 -15.2 -3.06133 | opp_overlap 355901 ATAAGCGAAAAAAAA CCCGCCGGGG CGAA CCGCGGCGGG TTACGTCGACCGTTC Bphy_0314 356580 - 355969 - | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 395 356225 - 356249 + g 75 -10.8 -3.85704 | gap 1, overlap 356228 TGCGAGATGATCGCG CCA-CCCAGCT TGAC AGCTGGGTTGG TTTCCTGATTCATGA TERM 396 356228 - 356245 + g 74 -11.3 -3.59233 | overlap 356225 GAGATGATCGCGCCA CCCAGCT TGAC AGCTGGG TTGGTTTCCTGATTC TERM 397 356723 - 356701 - R 90 -12 -4.2349 | opp_overlap 356692 356690 CGCCGATATGCAAAA GCGCCGCA TTCATCG TGCGGCGC CTTCGCGAATACTTT Bphy_0315 357693 - 356737 - | ribose-phosphate pyrophosphokinase Bphy_0316 358750 - 357869 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Bphy_0317 359409 - 358777 - | outer membrane lipoprotein LolB Bphy_0318 361250 - 359409 - | TPR repeat-containing protein TERM 398 361214 - 361170 - G 80 -14.9 -3.14132 | opp_overlap 361184, overlap 361184 GGCGGCGCCCAGCAA CCGGCGCGCGGAAACGGCGTG CGG CACGCTGTTTGCACGGGCCCG GCGCTTCAGAAACTG Bphy_0319 361338 - 362168 + | formamidopyrimidine-DNA glycosylase TERM 399 362376 - 362393 + G 76 -9.8 -4.13014 | overlap 362367 GGTGATCCCGTACTA CGCGCG TTTTCT CGCGCG TTTTCCGGATGTCGC Bphy_0320 362176 - 363285 + | A/G-specific adenine glycosylase Bphy_0321 363931 - 363296 - | peptidase S16 lon domain-containing protein TERM 400 363515 - 363532 + g 82 -5.5 -4.7173 | GATGCGCTCGAGCAC TTCCGCG CACG CGCCGAA TTTTTCCATCTGCTG Bphy_0322 364884 - 363991 - | hypothetical protein TERM 401 364365 - 364330 - G 77 -13.2 -3.36749 | overlap 364331 CACGTCGAACACGAA GTCGGCGTCGAGCGGG ACCC CCCGCTTGAAGCCGAA CGACTCGAACATCAG TERM 402 364364 - 364331 - G 81 -16.7 -2.61728 | overlap 364330 ACGTCGAACACGAAG TCGGCGTCGAGCGGG ACCC CCCGCTTGAAGCCGA ACGACTCGAACATCA Bphy_0323 365930 - 364962 - | HPr kinase TERM 403 366117 - 366136 + r 81 -12.8 -3.53811 | opp_overlap 366117 GAGCGTCGAATCAAA CGCGGCGC CAAA GCGCCGTG TTTCCGCCGGCTCCC TERM 404 366136 - 366117 - R 77 -10.6 -3.90588 | opp_overlap 366117 GAGCGTCGAATCAAA CGCGGCGC CAAA GCGCCGTG TTTCCGCCGGCTCCC Bphy_0324 366680 - 366165 - | putative PTS IIA-like nitrogen-regulatory protein PtsN TERM 405 366896 - 366879 - R 100 -9.8 -5.63517 | opp_overlap 366879 CTCTCAAACAAAAAA CCGCCC GATGTA GGGCGG TTTCGCGGGGTCAAG Bphy_0325 367289 - 366930 - | sigma 54 modulation protein/ribosomal protein S30EA TERM 406 367115 - 367128 + g 84 -6.7 -4.78933 | overlap 367103 TGCCCTTCAGATGCA GGTTG ATTT CAACC TTTTGTCTCTTTTCC TERM 407 367464 - 367440 - R 78 -9.2 -4.07568 | overlap 367441 GGTGCGGCCGGAAAA TGCCCGCCAC AGGAG GTAGCGGGCT ACAGAGACTTGCGCA TERM 408 367463 - 367441 - R 76 -12.7 -3.04398 | overlap 367440 GTGCGGCCGGAAAAT GCCCGCCAC AGGAG GTAGCGGGC TACAGAGACTTGCGC Bphy_0326 368980 - 367463 - | RNA polymerase, sigma 54 subunit, RpoN Bphy_0327 369990 - 369208 - | ABC transporter related Bphy_0328 370664 - 369987 - | lipopolysaccharide transport periplasmic protein LptA TERM 409 370638 - 370589 - G 72 -7.1 -4.28361 | gap 3 GCAATGCGATCAAAA GTGCCGCCAGCCCGGCGCG-GCTC GCGCG GAGCGCGCGC-GTGCGGCCGG-AC TCAAAACGGGGGAAC Bphy_0329 371290 - 370697 - | hypothetical protein Bphy_0330 371850 - 371287 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Bphy_0331 372890 - 371850 - | KpsF/GutQ family protein Bphy_0332 372982 - 374985 + | sodium/hydrogen exchanger TERM 410 375243 - 375276 + G 72 -10.9 -3.48276 | opp_overlap 375242 375243 TGCAAAAACCGAAAT CGCTGCGCGTGCTGA TCGA TCTGTTCGTGCAGCG TTATATCGACCAGAA Bphy_0333 375110 - 375676 + | adenine phosphoribosyltransferase Bphy_0334 375702 - 376316 + | lysine exporter protein LysE/YggA TERM 411 376658 - 376696 + G 73 -12.3 -3.33922 | overlap 376659 376684 CCGCAATGCGTTCGA TGCGCCGCCGCTCGC GTATATCGA GCGCGCGGCGTCGCG CTTTTTCGGCACGAT TERM 412 376659 - 376695 + G 70 -13.6 -2.60032 | overlap 376658 376684 CGCAATGCGTTCGAT GCGCCGCCGCTCGC GTATATCGA GCGCGCGGCGTCGC GCTTTTTCGGCACGA TERM 413 376684 - 376697 + G 86 -9.5 -4.57073 | overlap 376659 376658 TCGCGTATATCGAGC GCGCG GCGT CGCGC TTTTTCGGCACGATG Bphy_0335 376371 - 377219 + | NUDIX hydrolase Bphy_0336 377293 - 378156 + | formyltetrahydrofolate deformylase TERM 414 378178 - 378206 + T 100 -15.3 -5.05782 | gap 1 TTTATTTCGTCTGAA CCGGCGCGTGCC TTGCTC GGC-CGCGCCGG TTTTTTGGGGTGAAT Bphy_0337 379471 - 378233 - | PepSY-associated TM helix domain-containing protein TERM 415 378892 - 378914 + g 77 -4.6 -4.60924 | overlap 378894 GCGCGTAAGCGCCGC GCCGCACGCG AAA CGCGAACGAC TTTTTCCACGCTTTC TERM 416 379698 - 379679 - R 80 -10.6 -4.0162 | opp_overlap 379679 CCCGGATATGAGAAA GGGCGGCC TCAC GGTCGCCC TTTTTGCTCGACAGG TERM 417 379679 - 379698 + r 100 -12.8 -4.72272 | opp_overlap 379679 CCCGGATATGAGAAA GGGCGGCC TCAC GGTCGCCC TTTTTGCTCGACAGG Bphy_0338 380807 - 379722 - | hypothetical protein Bphy_0339 383928 - 380830 - | excinuclease ABC, A subunit TERM 418 380935 - 380947 + g 77 -4.7 -4.62471 | overlap 380936 CGGTTTCGGTGCATC GGCGG CGA CGGCC TTTTTCGGCCTTACC TERM 419 384657 - 384701 + G 78 -12.7 -3.55604 | overlap 384655 CGATGGTGGGCGGTT CGATCGGCGTGTCGTTTGCCG TGG CGATCGTCGGCGCGCCGATCG TGTTTCATTGGCTCG TERM 420 385306 - 385319 + G 78 -3.1 -4.9138 | gap 1 GCTGCTGAAGGTAGA CGGTCA GAG TG-CCG TTTTCTTTGCGTGCT Bphy_0340 384242 - 385399 + | major facilitator transporter Bphy_0341 385525 - 386043 + | single-strand binding protein TERM 421 386102 - 386124 + T 100 -14.8 -5.40072 | opp_overlap 386102 GAATGCAAGAAAAAA CACCCCGCCC ATC GAGCGGGGTG TTTTTTTAAGGGCAG TERM 422 386124 - 386102 - T 100 -17 -5.5074 | opp_overlap 386102 GAATGCAAGAAAAAA CACCCCGCCC ATC GAGCGGGGTG TTTTTTTAAGGGCAG Bphy_0342 386907 - 386164 - | short-chain dehydrogenase/reductase SDR TERM 423 387354 - 387370 + G 83 -5.7 -4.84761 | opp_overlap 387333, overlap 387355 CACGCCACTTCGTCG TGCCGGC GCT GCCCGCG TTTTTGTCACGCTAT Bphy_0343 387038 - 387943 + | LysR family transcriptional regulator Bphy_0344 388753 - 387950 - | hypothetical protein TERM 424 388883 - 388868 - H 70 -2.4 -4.81551 | overlap 388856 388869 TAGCGAGAGGAAAAA GCCCTC GGCA GCGAGC GATCTATGCGCAAGA TERM 425 388922 - 388904 - H 77 -10.4 -3.92592 | ATGCGCAAGATCAAA TTTGCGAA CAT TTCGCAAA AAGCGCCCGCCTGGC Bphy_0345 389091 - 390734 + | methyl-accepting chemotaxis sensory transducer TERM 426 390830 - 390796 - T 100 -16.5 -3.95852 | gap 1, opp_overlap 390790 390797, overlap 390797 ACGGCACGAAGCAAA CCGGCGGTGC-AGGCA TCGT TGCCTTGCACCGCCGT TCGTATTTGCAGAGC TERM 427 390797 - 390829 + T 100 -20 -3.45571 | gap 1, opp_overlap 390797 390796, overlap 390790 CGGCACGAAGCAAAC CGGCGGTGC-AGGCA TCGT TGCCTTGCACCGCCG TTCGTATTTGCAGAG TERM 428 390829 - 390797 - T 100 -20 -2.97029 | gap 1, opp_overlap 390790 390797, overlap 390796 CGGCACGAAGCAAAC CGGCGGTGC-AGGCA TCGT TGCCTTGCACCGCCG TTCGTATTTGCAGAG Bphy_0346 391660 - 390851 - | putative cytochrome c, class I Bphy_0347 393282 - 391657 - | cytochrome c oxidase subunit I TERM 429 392712 - 392656 - G 70 -11.4 -3.4072 | gap 2, opp_overlap 392655, overlap 392658 CAGCGTCCACGAGAA CAGCACG-CGCGCGAGGCCCG-CGTCGA TCG TCGACTTCAGGCCGAGCGCGACGGGCAG GATTTGCAACAGGAT TERM 430 392710 - 392658 - G 71 -12.6 -3.27475 | gap 2, opp_overlap 392655, overlap 392656 GCGTCCACGAGAACA GCACG-CGCGCGAGGCCCG-CGTCGA TCG TCGACTTCAGGCCGAGCGCGACGGGC AGGATTTGCAACAGG Bphy_0348 393841 - 393269 - | cytochrome c oxidase subunit II TERM 431 393797 - 393770 - G 78 -12.7 -3.48024 | opp_overlap 393769, overlap 393768 CGCGATGACGAAATA CGCCCAGCGCT TTTCCG AGCGCTCGGCG ACGGCATGACCGTTA Bphy_0349 394026 - 393844 - | hypothetical protein Bphy_0350 395453 - 394068 - | gluconate 2-dehydrogenase (acceptor) Bphy_0351 396172 - 395450 - | putative periplasmic cytochrome c protein TERM 432 396037 - 396048 + g 71 -4.4 -4.4767 | CGCCGTGACAGGTGG TGCA CGCA TGCA TTTTCTCGTCCATCG TERM 433 396079 - 396102 + g 72 -8.9 -4.07568 | overlap 396053 CCGATGGCGCGGACG CGTCGTTCG AGGCGG CGAACGATG TTTTCGCCCACACCG Bphy_0352 397461 - 396568 - | LysR family transcriptional regulator TERM 434 397284 - 397323 + g 73 -9.1 -3.86481 | gap 1, opp_overlap 397308, overlap 397299 397303 CAGGCGTCGCGGTGA CGC-CCAGCTTGCCGCGC AGGAA GAGCGGCTGGCCGGCGCG TTCTTCTAGCTTCTT Bphy_0353 397559 - 398812 + | major facilitator transporter TERM 435 398848 - 398871 + F 100 -13.2 -4.62102 | AGCACTCATTTTTGA GGCGTTCGAT AGAT GTCGAACGCC TTTTCCTGTTTTTAT TERM 436 398945 - 398971 + F 83 -8.1 -4.70515 | overlap 398958 398960 ATTTGATGTGTGCTG TCTGATTTCTC TGTCC GGGAAGTCAGA TTTATTTTAAATGTG TERM 437 398958 - 398997 + F 80 -4.4 -4.97405 | gap 1, overlap 398945 398960 TGTCTGATTTCTCTG TC-CGGGAAGTCAGATTTA TTT TAAATGTGACGTCGCGTGA TTTCTTTTTATGAGT Bphy_0354 399472 - 400125 + | two component LuxR family transcriptional regulator Bphy_0355 400234 - 400944 + | two component LuxR family transcriptional regulator Bphy_0356 400999 - 401670 + | two component LuxR family transcriptional regulator TERM 438 401763 - 401783 + F 79 -12.7 -3.28712 | TGTGGCGCCACGTCA TTGATTCGC GAT GCGAATCAA TTGTGACCAGGCGCA TERM 439 402112 - 402151 + G 71 -10.7 -3.64198 | gap 2, overlap 402118 CTCGCACCCTATATC GCCGCGCAAGTGCTCGGCG CCGT CGC-GGGCGCT-GCGCTGC TTGTCTATATCGCCA TERM 440 402435 - 402475 + G 82 -3.9 -5.0133 | gap 1, overlap 402447 402450 402453 CCGCTCGACGGGCCC GGCACTGCTCGTCG-GCG ACTGGG CGCTCGACCAGTTGTGGC TTTTTTGGGCGGCTC Bphy_0357 401854 - 402597 + | major intrinsic protein TERM 441 403395 - 403367 - g 89 -16.7 -3.29144 | CGAGTTGCGCGACAA GCTGGAGCGCGGC CTC GCCGCGCTTCAAC CGGAAGATGAAGCCG TERM 442 404872 - 404851 - g 84 -17.3 -2.78384 | opp_overlap 404839 404838 TGCTGGGCTATGACA GCGCTGCGC TGAT GCGCAGCGC TGCGCTCGACTTCGG TERM 443 405655 - 405667 + G 71 -9.1 -3.72576 | overlap 405633 CGGATGTTCAGGCGC GGCTC TTC GAGCC TTTCGTGCAGGCGGA TERM 444 406800 - 406839 + G 76 -9.2 -4.07568 | gap 1 TTGCTCGATGCGTTC GTGTCGGCAGTGCGCGACG ACC TG-CGTGCATTGCCGCCCC TTTTGAACGAGCCCG Bphy_0358 402606 - 407063 + | PAS/PAC sensor hybrid histidine kinase Bphy_0359 407255 - 407689 + | CHRD domain-containing protein TERM 445 407743 - 407713 - f 100 -23.4 -3.67611 | opp_overlap 407713 GGCAGGGCAACATAA TGGCCGGAACCGCC AAC AGCGGTTCCGGCCA TTTGCGATTCGAACG TERM 446 407713 - 407743 + F 100 -22.7 -3.66178 | opp_overlap 407713 GGCAGGGCAACATAA TGGCCGGAACCGC CAACA GCGGTTCCGGCCA TTTGCGATTCGAACG TERM 447 408154 - 408177 + G 88 -10.9 -4.21275 | overlap 408156 GCGTCGTTCGGCCTT GCCGCGCGC AGTGGG GCGCGCGTC TTTTCGCTCGATTAC TERM 448 408156 - 408175 + G 80 -12.1 -3.70331 | overlap 408154 GTCGTTCGGCCTTGC CGCGCGC AGTGGG GCGCGCG TCTTTTCGCTCGATT Bphy_0360 407857 - 408807 + | alpha/beta hydrolase domain-containing protein Bphy_0361 409619 - 408777 - | hypothetical protein TERM 449 409780 - 409759 - H 78 -2.9 -5.14563 | gap 1, opp_overlap 409775, overlap 409760 TGTTCTATCAAAAAA TGGCCGTGCA TAC CGC-CGCCCA CCATTCGAGTGGGCA TERM 450 410244 - 410257 + G 73 -5.9 -4.3739 | GCCAACGCGGTGGGA CCGTC ACTC GGCGG TTTTCTCACCCAATA Bphy_0362 409827 - 411353 + | EmrB/QacA family drug resistance transporter Bphy_0363 411390 - 411860 + | MarR family transcriptional regulator TERM 451 411902 - 411874 - T 100 -11.7 -6.08342 | opp_overlap 411874 GAAGAAATAAAAAAA GCGGCACTATGCA GTT CACACAGCGCCGC TTGCTCGACGAGGCG Bphy_0364 413207 - 411930 - | putative D-serine deaminase (d-serine dehydratase) protein TERM 452 412536 - 412562 + g 70 -10.9 -3.37344 | overlap 412535 412515 412538 GAGCTTCACGGCACT GCGCAGGAAGT CGCGC ACTTCCTGCTC TTCCTTCAATACACC TERM 453 412538 - 412560 + g 71 -12.1 -3.25652 | overlap 412535 412515 412536 GCTTCACGGCACTGC GCAGGAAGT CGCGC ACTTCCTGC TCTTCCTTCAATACA TERM 454 414115 - 414083 - g 73 -11.9 -3.36327 | overlap 414068 CGACTTCATTTACAA GCCGTCGTCGTCGCG CTA CGCGATGATGATGGC GCTCGACGTGCTGGT Bphy_0365 413349 - 414242 + | RpiR family transcriptional regulator Bphy_0366 414246 - 415733 + | N-acyl-D-amino-acid deacylase Bphy_0367 415792 - 416178 + | endoribonuclease L-PSP TERM 455 416256 - 416243 - T 70 -4.5 -4.52781 | gap 1 GAACCACAAGCAAAA CGC-GG ATG CCAGCG AAAGCGCAGAGCGAT TERM 456 416350 - 416339 - T 71 -7.2 -4.24984 | overlap 416340 AGACAAAATGACAAA CGGC TACT GCCG GGCAGTACGCAAATT Bphy_0368 417166 - 416342 - | 7-cyano-7-deazaguanine reductase Bphy_0369 418065 - 417163 - | 5'-nucleotidase TERM 457 417268 - 417256 - G 87 -5.5 -5.06414 | GTCGTCGAAGAAAAA GTCCG GCT CGAAC TCGCGCAGAAACGCG Bphy_0370 419598 - 418075 - | threonine dehydratase, biosynthetic TERM 458 419246 - 419277 + g 71 -7.3 -4.18197 | gap 2 TGCACGACCTCGACG GTCGGCCCGCCGTGC GCGC GCACGGCGT-CC-AC TTTTACCTGCGGCGT TERM 459 419534 - 419570 + g 75 -4.4 -4.66318 | overlap 419535 419536 GCATATTCGAGTTCG GTCTCA-CGCGCGACGTC GTA GACG-CGGGCGTTGAGGA TTTTCTTCAGATAGT TERM 460 424001 - 423980 - g 86 -6.5 -4.97402 | gap 1, overlap 423983 CAAAATCGAGAAAAA CGAC-CGCTG CTG CGGCGAGTCG GGCACGCTGGCCGTT Bphy_0371 420306 - 424421 + | FAD linked oxidase domain-containing protein Bphy_0372 424454 - 424882 + | histidine triad (HIT) protein TERM 461 424908 - 424936 + G 86 -15.4 -3.17763 | gap 1 GAGTGGATTGACACC CGAC-ACGCCCGT GCCT ACGGGCGTCGTCG TTCATGCCGTATCGC Bphy_0373 424891 - 425304 + | hypothetical protein Bphy_0374 425374 - 426105 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 462 426757 - 426773 + G 74 -11.5 -3.59979 | overlap 426756 426772 GATATCGCCGCCACG CCGGCCG TTC CGGCTGG TTTCGACTCGGAAGC TERM 463 426967 - 426933 - g 84 -12.8 -3.78934 | opp_overlap 426938, overlap 426934 426936 426952 CGGCGCCGAGAAGAA CCAGACCGACGTCGTG AAA CTCGACGCCGATCTGC TGGGCGTCGAGGATC TERM 464 426966 - 426934 - g 84 -16.3 -2.87146 | opp_overlap 426938, overlap 426933 426936 426952 GGCGCCGAGAAGAAC CAGACCGACGTCGTG AAA CTCGACGCCGATCTG CTGGGCGTCGAGGAT TERM 465 426964 - 426936 - g 71 -13.1 -2.98545 | opp_overlap 426938, overlap 426934 426933 426952 CGCCGAGAAGAACCA GACCGACGTCGTG AAA CTCGACGCCGATC TGCTGGGCGTCGAGG TERM 466 426978 - 426952 - g 75 -12.3 -3.54543 | opp_overlap 426938, overlap 426936 426934 426933 ACCGACGTCGTGAAA CTCGACGCCGA TCTGC TGGGCGTCGAG GATCGCGGCAGCGAA Bphy_0375 426142 - 427137 + | import inner membrane translocase subunit Tim44 TERM 467 427201 - 427226 + F 100 -19.7 -4.79451 | opp_overlap 427201 ACGTTACAATAGGAA CCCGCGTCGGC AGTC GCCGGCGCGGG TTTTCTCTTTCCACT TERM 468 427226 - 427201 - f 93 -17.5 -3.42013 | opp_overlap 427201 ACGTTACAATAGGAA CCCGCGTCGGC AGTC GCCGGCGCGGG TTTTCTCTTTCCACT Bphy_0376 427246 - 427890 + | sterol-binding domain-containing protein TERM 469 428735 - 428745 + G 79 -6.8 -4.56597 | TCTTCACGCAGGTGT TCCG CGA CGGA TTTTTCCACGCGGAC TERM 470 428990 - 428978 - g 74 -10.5 -3.72051 | opp_overlap 428976 TCGAAGAACTCGAAA GCGCG ATC CGCGC GGTGTGTGAGCCGTA Bphy_0377 427906 - 429489 + | 2-polyprenylphenol 6-hydroxylase TERM 471 429810 - 429831 + G 70 -5.7 -4.27467 | overlap 429811 AACTCGGCTCGCATG CCAGCCTCG TGCA CGAGGCGGA TTTCTTCACTTATCG TERM 472 429951 - 429969 + G 100 -9.5 -5.13354 | CGCAACTCCTGTCGC CCGGCGG ACTGC TCGCCGG TTTCTTTTTTATCGG Bphy_0378 429512 - 430153 + | thiopurine S-methyltransferase TERM 473 430185 - 430202 + F 95 -14.1 -3.66874 | overlap 430197 CCCCATCTGCTAGCG CGGCCGG GATG CCGGCCG TTTCCCTCGAATTCG Bphy_0379 430292 - 430636 + | FmdB family regulatory protein TERM 474 430669 - 430691 + F 72 -9 -3.87815 | overlap 430670 CGAGGTGACGTAGAC GCCGCGCAAC GCA GTCGCGCGGA TTTCTGGCGGTACAC TERM 475 430670 - 430690 + F 74 -12.5 -2.92475 | overlap 430669 GAGGTGACGTAGACG CCGCGCAAC GCA GTCGCGCGG ATTTCTGGCGGTACA Bphy_0380 430707 - 431363 + | hypothetical protein Bphy_0381 431436 - 433235 + | aspartyl-tRNA synthetase TERM 476 433319 - 433291 - f 77 -11.8 -3.61652 | opp_overlap 433291 433292 433298, overlap 433292 433298 TGTGCAAAGAACCAA CGAAAAAGGCGC GTTAT GCGCCTTTTTCC TTTTTTGCGATAAAG TERM 477 433291 - 433319 + F 100 -12.5 -5.0538 | opp_overlap 433291 433292 433298, overlap 433292 433298 TGTGCAAAGAACCAA CGAAAAAGGCGCG TTA TGCGCCTTTTTCC TTTTTTGCGATAAAG TERM 478 433318 - 433292 - f 83 -15.3 -2.76509 | opp_overlap 433292 433291 433298, overlap 433291 433298 GTGCAAAGAACCAAC GAAAAAGGCGC GTTAT GCGCCTTTTTC CTTTTTTGCGATAAA TERM 479 433292 - 433318 + F 90 -16 -3.62746 | opp_overlap 433291 433292 433298, overlap 433291 433298 GTGCAAAGAACCAAC GAAAAAGGCGCG TTA TGCGCCTTTTTC CTTTTTTGCGATAAA TERM 480 433312 - 433298 - f 100 -8.5 -4.9445 | opp_overlap 433298 433292 433291, overlap 433292 433291 AGAACCAACGAAAAA GGCGC GTTAT GCGCC TTTTTCCTTTTTTGC TERM 481 433298 - 433312 + F 100 -9.2 -5.25735 | opp_overlap 433292 433291 433298, overlap 433292 433291 AGAACCAACGAAAAA GGCGCG TTA TGCGCC TTTTTCCTTTTTTGC Bphy_0382 433406 - 433882 + | NUDIX hydrolase TERM 482 433935 - 433956 + G 75 -3.7 -4.63218 | gap 1 GCATCTGCCCGGCCG GCGCTA-CTG GTC CAGGTATCGC TTTTGTTCCGGCAAC Bphy_0383 433879 - 435159 + | phospholipase D/transphosphatidylase TERM 483 435328 - 435365 + F 100 -9.2 -5.30616 | gap 1, overlap 435329 TAAATTTCTTGTTTC GCGGACGGTCG-GCCAT CAATA ATGGTACGACCGTTCGA TTTTTCTTTCGGTCA TERM 484 435329 - 435364 + F 84 -12.7 -3.77285 | gap 1, overlap 435328 AAATTTCTTGTTTCG CGGACGGTCG-GCCAT CAATA ATGGTACGACCGTTCG ATTTTTCTTTCGGTC TERM 485 435429 - 435419 - g 77 -8.2 -4.24711 | opp_overlap 435419 435418 GAAAAGGCGAACAAA CGCG AGC CGCG ATTCTCGATGCAGCA Bphy_0384 435400 - 436005 + | TetR family transcriptional regulator TERM 486 437650 - 437668 + G 73 -13.8 -2.87344 | opp_overlap 437638 437626 437648 437617 437649 GAACCCGGACGAAGT CGGCGCGG CCG CCGTGCCG TATCTGCGCACCGTC Bphy_0385 436100 - 437887 + | acyl-CoA dehydrogenase domain-containing protein TERM 487 437922 - 437897 - f 100 -21.9 -3.09933 | opp_overlap 437892 TTCTAAGCCATCGAA GGCGGCGCACG CGGC CGTGCGCCGCC CACCCTCTCTCACAC TERM 488 438214 - 438181 - g 91 -8.7 -4.7416 | CGAAAACCTGAAAAA GCTGTCGCCCGCGCC ATTC GGCGCGAAGGACGAC GCACAATACATTCAG TERM 489 438875 - 438819 - g 71 -9.2 -3.72576 | gap 1, opp_overlap 438850, overlap 438820 TCGCCGTCTACGAAA CGCCCGCCGTGCTGACCGGACTCGTGC AGCA GGGCGCGCTCGGCCAGAA-GACGGGCG CGGGCTTCTACAAGA Bphy_0386 438011 - 440455 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding Bphy_0387 440467 - 441666 + | acetyl-CoA acetyltransferase TERM 490 441678 - 441699 + F 70 -4.3 -4.62336 | gap 1, overlap 441678 441679 TTGATGTCTTGCTCG C-GGCGCGGC CCT GCCCTGCCAG TTTTTGAGCTGGCAT TERM 491 441790 - 441771 - f 72 -6.4 -4.26903 | overlap 441778 441780 GCCAGCGCAGGAAAA GGCAAAAC ACCC GCTTCGCC GGGGAAAGCATTCCA Bphy_0388 441843 - 442607 + | enoyl-CoA hydratase/isomerase Bphy_0389 443447 - 442626 - | formate dehydrogenase family accessory protein FdhD TERM 492 443901 - 443947 + G 81 -12.8 -3.57119 | opp_overlap 443890, overlap 443936 ACCAGGCGGAGCTTG CGGATCTTGCTGCGCCGAGCGC AGC GCAATGGGCGCAGCTGGAGCCG TTTCAGCGGTATGTG Bphy_0390 443564 - 444040 + | hypothetical protein TERM 493 444136 - 444118 - f 77 -11.7 -3.53091 | opp_overlap 444117 AGGTTGGCGCGTAAA GCGCTGC GCCCG GCAGCGC CTGTATCGCTCGCGT TERM 494 444643 - 444609 - g 79 -10 -4.07568 | gap 1, overlap 444588 CCGCGCTTGCGAAAA CCACGGCGCCCGAGC AGGACG GCTCACGCGCC-TGG GCCGCGCAGACCTAC TERM 495 444896 - 444847 - g 95 -14.9 -4.13767 | gap 1, opp_overlap 444871 444874 CGGCGCACGGGAAAA CGTCGCGCGGGAAAAGC-TGCGCG TCG CGCGCACGCTGCACCGGAGCGACG AGCGCTTTCGCGGGC Bphy_0391 444224 - 447346 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Bphy_0392 447811 - 447404 - | thioesterase superfamily protein TERM 496 447457 - 447486 + g 79 -10.7 -4.15044 | opp_overlap 447458, overlap 447458 TGTCGGTCGCGACAT AGGTGAGGGTCGC TTCC GTGACCTTCACCG TTTCTTCCGCGAGGC TERM 497 447458 - 447485 + g 76 -14.2 -3.08812 | opp_overlap 447458, overlap 447457 GTCGGTCGCGACATA GGTGAGGGTCGC TTCC GTGACCTTCACC GTTTCTTCCGCGAGG Bphy_0393 448102 - 449997 + | ABC transporter related Bphy_0394 450772 - 450074 - | nucleotidyl transferase Bphy_0395 451830 - 450784 - | aminoglycoside phosphotransferase TERM 498 451028 - 451041 + g 82 -3.7 -5.06451 | opp_overlap 451009, overlap 451029 CCGAAGTCGGCATCG ACGGG CAGG CCCGC TTTTTTCGCGTGCTC TERM 499 451934 - 451952 + H 71 -11 -3.30771 | overlap 451935 TACCCCACGACTTTT TTGACGCG ACT CGCGTCAG TTCTCGCGCATCTCG TERM 500 452290 - 452256 - g 80 -15.6 -2.89564 | overlap 452288 GGCGCAGCCGATAGA CGCGCCGTGGGGCCTG CGG CTGGCCCCACAACTCG AAGAACATTCGACGC Bphy_0396 452101 - 454467 + | organic solvent tolerance protein TERM 501 454957 - 454922 - g 71 -7.4 -4.11692 | gap 1, overlap 454934 CATCCAGTTGCAAAA GGCGCG-CGAAGACGGC ATC ACCGTCGACGACGCGAC GGTGCAGCGCACACT TERM 502 455037 - 454997 - g 77 -11.9 -3.65046 | CGCCCAGGCGAACAA CTTGCAGCTCGACATGTAC CGC GCACGTATCGAGGCGCAAG GCGTGCCCTGGACGA Bphy_0397 454623 - 456014 + | SurA domain-containing protein TERM 503 457000 - 457030 + G 93 -6.7 -5.18357 | overlap 457003 GATCGACACCGCTGT TTTCATGGCGCGC AACCG GCGCGCCGCGTGA TTTTTTCGTAGCTTC Bphy_0398 456029 - 457030 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 504 457323 - 457306 - g 70 -4.9 -4.44667 | gap 1 CGTCTGAAGAAGAAA TTCG-GCA ACC TGCTCGAA CTGCACGAAGGCGAC Bphy_0399 457051 - 457881 + | dimethyladenosine transferase TERM 505 457945 - 457969 + F 93 -11.4 -4.70583 | opp_overlap 457949, overlap 457949 GCACAGATCAGTGTA GACAGCCCGC AACAC GCGGGCTTTC TTTTATCTTCCTGAC TERM 506 457949 - 457965 + F 100 -10.8 -4.88163 | opp_overlap 457949, overlap 457945 AGATCAGTGTAGACA GCCCGC AACAC GCGGGC TTTCTTTTATCTTCC TERM 507 458031 - 458051 + F 71 -10.4 -3.57561 | gap 1 CGCTTGCCATTTGCG GCGGCTGCG CTGC CGC-GCCGC TTTAAGACATTCCCA Bphy_0400 458105 - 459232 + | porin Bphy_0401 459311 - 459697 + | lactoylglutathione lyase Bphy_0402 460604 - 459747 - | hypothetical protein TERM 508 459858 - 459875 + g 74 -12.7 -3.25823 | CGGACTATGGTTCAT CTCGCGC AAAT GCGCGAG TTCATGTGCGACGAC TERM 509 460503 - 460519 + g 79 -10.1 -4.08945 | overlap 460504 AGCAGCGGGCTTCGG TTGCGGC GGC GCCGCAG TTTTGCCCGGCTCGT Bphy_0403 461422 - 460664 - | phospholipid/glycerol acyltransferase TERM 510 461442 - 461462 + r 77 -10.3 -3.8917 | overlap 461443 461445 GTGGTCAGTGGGTGA GGGCGCGCG CTA CGCGCGTCA TTCTTGTACTTCGGC TERM 511 461443 - 461461 + r 77 -13.8 -2.9302 | overlap 461442 461445 TGGTCAGTGGGTGAG GGCGCGCG CTA CGCGCGTC ATTCTTGTACTTCGG TERM 512 461445 - 461459 + r 74 -12.8 -3.01074 | overlap 461443 461442 GTCAGTGGGTGAGGG CGCGCG CTA CGCGCG TCATTCTTGTACTTC TERM 513 461532 - 461484 - R 72 -8.8 -3.86015 | gap 2 TACTTCGGCGAGAAA GTCC-AGGGCGAACGCGCGCA-GA TCG TCATGCACGCGCGTGCCCTCGGGC AAACCGCCTGCTTCG Bphy_0404 462017 - 461460 - | histidinol-phosphate phosphatase family protein TERM 514 461789 - 461748 - G 77 -11.6 -3.79113 | gap 3, opp_overlap 461751 ATGCGGGCAGAAGAA CACCGCGTCGATGCGCCCGCC GAC GGCGGCCGC--CG-CGCGATG CATCTTCAGATGCAT Bphy_0405 464127 - 462028 - | glycyl-tRNA synthetase, beta subunit TERM 515 462252 - 462264 + g 76 -6.2 -4.58283 | overlap 462228 CAACCTGCTCAAGTT GCGC ATGCA GCGC TTTTTCGGCCGCTTC TERM 516 462982 - 463030 + g 73 -9.5 -3.84406 | gap 2, overlap 463021 CATTGCCGCAATTGC GC-CTGC-CAGCGCTTCGACGCG CTCGA CGCGTTGCAGCGCCGAGCCGAGC TTGTTGTGATAGACG Bphy_0406 465150 - 464143 - | glycyl-tRNA synthetase, alpha subunit TERM 517 465326 - 465336 + r 71 -8.2 -4.06384 | overlap 465319 465325 GGGGTGTGGCGGTTC GGCG GGG CGCC TTTGTGCTGTTCACG TERM 518 465379 - 465389 + r 70 -2.4 -4.72127 | TTTTGCCTCGATCTC AGGC GTT GCCG TTGTTTTTGTTCTTC Bphy_0407 467071 - 465377 - | apolipoprotein N-acyltransferase TERM 519 465739 - 465759 + g 77 -11.1 -3.72576 | CAGCCGGCGAGTCGC TCTCGCGCA CCG TGCGCGCGA TTTCCTCGCCGAAGA TERM 520 466362 - 466388 + g 88 -9.5 -4.65895 | gap 2, overlap 466366 ATCGCGATGCCGGCG CAGCGCGGGGCAG CGT CTGCC--GCGCTG TTTTTCGGTGCGCGC TERM 521 466366 - 466386 + g 84 -12.5 -3.94812 | overlap 466362 CGATGCCGGCGCAGC GCGGGGCAG CGT CTGCCGCGC TGTTTTTCGGTGCGC Bphy_0408 468004 - 467108 - | CBS domain-containing protein TERM 522 467926 - 467950 + g 82 -5.7 -4.75404 | opp_overlap 467925 CGGGCGAGATGAAGT CGGTCAATC GCTCGAG GAGTGACCG TTTTTCCTGGGGTTT TERM 523 468009 - 468032 + r 79 -13.8 -3.02461 | GAATCGTTCATGGTG GTGCGCCCGG AAAA CTGGGCGCGC TGTTGCAGAGCGTTA Bphy_0409 468806 - 468147 - | ChaC family protein TERM 524 468370 - 468343 - G 71 -4 -4.46212 | gap 1, overlap 468344 468347 CGCCGCATGACAAAA GCGA-GGGCATCG ACG CGCCGCCCATCGG CGAGTACGCACGGCA Bphy_0410 469353 - 468892 - | hypothetical protein Bphy_0411 470472 - 469384 - | PhoH family protein TERM 525 470391 - 470422 + g 71 -10 -3.65812 | overlap 470411 GCCGCAGGTTTTCGT CGAGCGGCCCGC AGAGGTTG GCGAGCCGCGCG TTGTCTTCGCGCGGC Bphy_0412 471875 - 470505 - | tRNA-i(6)A37 thiotransferase enzyme MiaB Bphy_0413 473115 - 472090 - | LysR family transcriptional regulator Bphy_0414 473226 - 473621 + | hypothetical protein Bphy_0415 473642 - 474820 + | major facilitator transporter TERM 526 475038 - 475057 + F 71 -11.4 -3.29144 | CCTTCACTAGTGCTT GCTCCGCG CCGG TGCGGAGC TTCTGGAGGCAATCA Bphy_0416 475072 - 475761 + | XRE family transcriptional regulator Bphy_0417 476228 - 476962 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase Bphy_0418 477769 - 477083 - | HAD family hydrolase Bphy_0419 479397 - 477898 - | glycerol kinase Bphy_0420 481101 - 479566 - | FAD dependent oxidoreductase TERM 527 481019 - 481051 + g 72 -13.4 -3.14132 | gap 1, opp_overlap 481002 481016 AGCACGGAGAGACTG CGGCCCGCGGCGTCG CGCG CGATGCC-CGCGCCG TTGATCCCGCCACCG Bphy_0421 481314 - 481703 + | hypothetical protein TERM 528 481810 - 481779 - T 100 -15.9 -4.45168 | opp_overlap 481799 GCGTGAAAACATAAA GACGGTCAGGCGG GCAGTT CCGCGTGACCGTC CAGGCGTCCGTATGC Bphy_0422 482097 - 481900 - | hypothetical protein TERM 529 481967 - 481977 + g 70 -2.4 -4.61231 | CGCCATTGCTGCAAG CCCG ACG CGAG TTTTTCGAGCTCTAC Bphy_0423 483270 - 482491 - | DeoR family transcriptional regulator TERM 530 483003 - 483019 + g 81 -9.3 -4.30576 | TGTGGGTCGCGACGA GCGCCGC GAT GCGCCGC TTTTCGTCGTGGAAC TERM 531 483244 - 483274 + g 93 -4.6 -5.24129 | opp_overlap 483199, overlap 483247 CTGTTGACGTGCGTT CAGCGTGAGGCGGG GGT CTCGTGTCATGGTG TTTTTTGTGAGCACC TERM 532 483334 - 483370 + H 95 -6.4 -5.54264 | overlap 483336 483347 CCGTATTGTAAGACC TTCGTTGCCGTCGCCG TCGCC CGTCGTGGGCAGCGGA TTTTTTTGCGTGTTT TERM 533 483347 - 483369 + H 72 -9 -3.90118 | overlap 483336 483334 CCTTCGTTGCCGTCG CCGTCGCCCG TCG TGGGCAGCGG ATTTTTTTGCGTGTT Bphy_0424 483689 - 484516 + | hypothetical protein TERM 534 484492 - 484504 + F 72 -4.8 -4.62783 | CCCGCTCGCGAAGAT CACG CAGCA CGTG TTTTTCCGCTGAATG Bphy_0425 484555 - 485079 + | hypothetical protein TERM 535 485086 - 485113 + T 93 -13.4 -3.81027 | opp_overlap 485079 485082 GGCACATAGGAGCGG GACGTCCGCGGT GAAA GCGGCGGACGTC TTTGCATTGCTTCAG Bphy_0426 486693 - 485125 - | DEAD/DEAH box helicase domain-containing protein TERM 536 486334 - 486290 - G 84 -16.4 -2.80935 | gap 1 ATGTGATCGAGCAGA CGCCCTGGCGTCGCGACGACG ATGT CGACGCCGCGACG-CAGTGCA TCGATCTGCGGATTG Bphy_0427 487510 - 486890 - | hemolysin III family channel protein TERM 537 487300 - 487276 - G 75 -8 -4.29304 | gap 1 CGATCAGAAGATAAA TTGCAG-AGTG ATCA CACTTCTGCAA GATCGCCTTAAGACC TERM 538 487670 - 487629 - R 100 -12.9 -4.63527 | gap 1, overlap 487634 CCATCACCTCAAAAA GCGAAGGGCGCGGCCT-CGA TTA TCGCAGGCCGCGCCCCAACC CTTGAGACGATGCTC TERM 539 487665 - 487634 - R 100 -22.4 -3.45433 | gap 1, overlap 487629 ACCTCAAAAAGCGAA GGGCGCGGCCT-CGA TTA TCGCAGGCCGCGCCC CAACCCTTGAGACGA Bphy_0428 488982 - 487684 - | gluconate 2-dehydrogenase (acceptor) TERM 540 488817 - 488833 + g 86 -13.7 -3.73914 | opp_overlap 488806 TACAGTCACCCGCGC GGGCGAG GTA CTCGCCC TTCTTGATCAATGCT Bphy_0429 489722 - 489003 - | cytochrome c class I Bphy_0430 490109 - 490591 + | copper resistance protein CopC Bphy_0431 490588 - 491517 + | copper resistance D domain-containing protein Bphy_0432 491857 - 491555 - | hypothetical protein TERM 541 492123 - 492106 - R 100 -14.1 -3.8572 | opp_overlap 492106 GACAAGATGACCAAA CGCCGCC CGTA GGCGGCG TTGTGCTTCATTGGC TERM 542 492106 - 492123 + r 88 -14.1 -3.56727 | opp_overlap 492106 GACAAGATGACCAAA CGCCGCC CGTA GGCGGCG TTGTGCTTCATTGGC Bphy_0433 493305 - 492157 - | mandelate racemase/muconate lactonizing protein TERM 543 492891 - 492913 + g 71 -10.4 -3.62046 | TCACGGCTTTGAAGC CGCGCTCGAC GAC GGCGCGCGCG TTGTTCGCGACGTCG Bphy_0434 493390 - 494253 + | GntR domain-containing protein Bphy_0436 495065 - 495376 + | MarR family transcriptional regulator TERM 544 495402 - 495416 + T 78 -9.2 -4.00589 | TTTGTGCGTGACCGT GGCGGC AGC GCCGTC TTTGATCTCTTTTCC TERM 545 495458 - 495497 + T 100 -16.6 -3.73224 | opp_overlap 495458 495465, overlap 495465 GAACAGCTCGGGAAA TGAAAAAGCCGCTGTTTC GTGA GAAACAGCGGCTTTCGCA TTTGGTGGCGAATCA TERM 546 495497 - 495458 - T 100 -18.8 -3.55548 | opp_overlap 495458 495465, overlap 495465 GAACAGCTCGGGAAA TGAAAAAGCCGCTGTTTC GTGA GAAACAGCGGCTTTCGCA TTTGGTGGCGAATCA TERM 547 495465 - 495490 + T 100 -17.7 -3.73107 | opp_overlap 495458 495465, overlap 495458 TCGGGAAATGAAAAA GCCGCTGTTTC GTGA GAAACAGCGGC TTTCGCATTTGGTGG TERM 548 495490 - 495465 - T 100 -17.7 -4.98531 | opp_overlap 495465 495458, overlap 495458 TCGGGAAATGAAAAA GCCGCTGTTTC GTGA GAAACAGCGGC TTTCGCATTTGGTGG TERM 549 495631 - 495596 - T 93 -17.6 -3.25491 | gap 1, opp_overlap 495596 495598, overlap 495598 AAGGCAGATTATGAA GATGCCGC-CGGGGGCT GTC AACCCCCGCGCGGCAAC TTTTTGCGAGAACTC TERM 550 495596 - 495631 + T 100 -15.4 -4.57073 | gap 1, opp_overlap 495596 495598, overlap 495598 AAGGCAGATTATGAA GATGCCGC-CGGGGGCT GTC AACCCCCGCGCGGCAAC TTTTTGCGAGAACTC TERM 551 495629 - 495598 - T 100 -18.8 -3.18849 | gap 1, opp_overlap 495596 495598, overlap 495596 GGCAGATTATGAAGA TGCCGC-CGGGGGCT GTC AACCCCCGCGCGGCA ACTTTTTGCGAGAAC TERM 552 495598 - 495629 + T 85 -16.6 -2.60032 | gap 1, opp_overlap 495598 495596, overlap 495596 GGCAGATTATGAAGA TGCCGC-CGGGGGCT GTC AACCCCCGCGCGGCA ACTTTTTGCGAGAAC Bphy_0437 497322 - 495664 - | major facilitator transporter Bphy_0438 499097 - 497550 - | integral membrane sensor signal transduction histidine kinase Bphy_0439 499867 - 499106 - | two component transcriptional regulator TERM 553 499175 - 499190 + g 85 -11.8 -4.13767 | overlap 499176 CCCCGTTGTCTGCGG CGCCGC CTGA GCGGCG TTTTGCGCTGGCGCG TERM 554 499947 - 499979 + H 76 -13.6 -2.71144 | gap 1 TAGTTGGGTGTTGTC CGTTTGCGCATGTGG ACAT CCGCATGCG-AAACG TGCTTGCCAAAACTA TERM 555 500174 - 500158 - g 70 -5.1 -4.40358 | opp_overlap 500158, overlap 500160 500164 ACTGACTGCAGAAAA GAGCAAG GCA CTTGCTG CCGCGCTTGCGCAGA Bphy_0440 500114 - 501190 + | recA protein TERM 556 501261 - 501292 + G 87 -15.2 -3.64283 | AAGACGGGCGGTCCG CGTGACGACGATGC AATT GAGTCGTCGTCACG TTCTTCGAGCATTTC Bphy_0441 501198 - 501986 + | regulatory protein RecX Bphy_0442 502157 - 502894 + | hypothetical protein Bphy_0443 502950 - 504119 + | succinyl-CoA synthetase, beta subunit Bphy_0444 504234 - 505115 + | succinyl-CoA synthetase, alpha subunit TERM 557 505133 - 505166 + F 87 -16.9 -2.73875 | opp_overlap 505132 505141, overlap 505141 AGGGTTGCGATAAGC TCAAGAAACGCCGGT CGAC GCCGGCGTTTTTTGA TACTCTTGCGAAGGC TERM 558 505158 - 505141 - f 80 -9.8 -4.21989 | opp_overlap 505133 505141, overlap 505132 GATAAGCTCAAGAAA CGCCGG TCGACG CCGGCG TTTTTTGATACTCTT TERM 559 505141 - 505158 + F 100 -10.5 -5.2112 | opp_overlap 505141 505132, overlap 505133 GATAAGCTCAAGAAA CGCCGGT CGAC GCCGGCG TTTTTTGATACTCTT TERM 560 505204 - 505231 + F 100 -12 -5.4756 | opp_overlap 505204 AAGACGCAGCGACAA GCGAGGGAGCGA GCAA TTGCTGCCTCGC TTTTTTGTTGCCGTT Bphy_0445 505276 - 505989 + | integral membrane protein TerC TERM 561 506085 - 506122 + F 90 -16.4 -3.55071 | gap 1, opp_overlap 506089, overlap 506089 GCCGCTCGCTACGAT CG-AAGCGCCTGTCCTG ATTCC CGGGGCAGGCGCTTTCG TTTCGAGGAGTCTGC TERM 562 506117 - 506089 - f 73 -12.3 -3.09516 | opp_overlap 506085 506089 CTCGCTACGATCGAA GCGCCTGTCCTGA TTC CCGGGGCAGGCGC TTTCGTTTCGAGGAG TERM 563 506089 - 506117 + F 100 -16 -4.05788 | opp_overlap 506089, overlap 506085 CTCGCTACGATCGAA GCGCCTGTCCTG ATTCC CGGGGCAGGCGC TTTCGTTTCGAGGAG Bphy_0446 506140 - 506757 + | putative type IV fimbrial pilin protein TERM 564 507041 - 507061 + F 84 -6.8 -4.7497 | opp_overlap 507042, overlap 507042 CAATTGAAGCAGTAG ACGTGCTC CTTGT GAGCACGC TTTTTAGTGAATGCG TERM 565 507131 - 507172 + F 85 -16.5 -2.70275 | overlap 507150 CTGATTACCGTCAGG TCCCGCCCAGTCAGCGG CTTCACTC CCGCCGACAGGGCGGGG TGATGTGTGCAATTC TERM 566 507847 - 507862 + F 70 -11.8 -2.78627 | overlap 507844 507841 507841 507850 TTACTTGGTTAGATG CGGGCG CATG CGCCCG TACTGTGGTTTTTGT TERM 567 507920 - 507972 + F 80 -14.2 -2.78816 | gap 2, overlap 507921 507930 TGAGGTTTCTGTTGT TCCCCAGCGG--GGTGTGTCTTCCCC GCT GGGGGAGATGCGCCTTCTGCCGGGGA TCTAATCCAAGGTAG TERM 568 507930 - 507960 + F 82 -14 -3.29263 | overlap 507921 507920 GTTGTTCCCCAGCGG GGTGTGTCTTCCCC GCT GGGGGAGATGCGCC TTCTGCCGGGGATCT Bphy_0447 507997 - 509703 + | RNA-directed DNA polymerase TERM 569 510220 - 510236 + G 70 -2.1 -4.67556 | overlap 510218 AGCGGCGGCCTTTGC GCTGGTC GTC GGCGGGC TTTTTGCGGTCTTCT TERM 570 510951 - 510979 + G 88 -17.4 -3.12668 | overlap 510953 GGTTCGTGCGCGTGG TGCGCGCGCCGC ACACG GCGGCGCGCGTG TTCGGTCTCGCACTG TERM 571 510953 - 510977 + G 100 -20 -3.12327 | overlap 510951 TTCGTGCGCGTGGTG CGCGCGCCGC ACACG GCGGCGCGCG TGTTCGGTCTCGCAC Bphy_0448 509828 - 511618 + | O-antigen polymerase Bphy_0449 512181 - 511705 - | molybdenum cofactor biosynthesis protein C Bphy_0450 512380 - 514068 + | peptidase M48 Ste24p Bphy_0451 514661 - 514065 - | hypothetical protein Bphy_0452 515667 - 514654 - | putative hydrolase of the alpha/beta-hydrolase fold Bphy_0453 516264 - 515818 - | hypothetical protein Bphy_0454 517466 - 516441 - | lipopolysaccharide heptosyltransferase II TERM 572 516932 - 516977 + g 80 -14.1 -3.35813 | gap 2, opp_overlap 516924 516929 516926 GGCAGAAGACCAGCA GCGGTACGCGCGTGTCGAGGT TGAAGC GCGTCGACACGCGCG--CCGC TTCGTTCAGATCGGC TERM 573 517522 - 517494 - R 100 -15.2 -3.92542 | opp_overlap 517491 517490 CCGATGTCGAAATAA GGCGCCGCGCGC TCGAG GCGCACGGTGCC GGGGTTGTCGAGGAT Bphy_0455 517848 - 517654 - | hypothetical protein Bphy_0456 518843 - 517920 - | branched-chain amino acid aminotransferase TERM 574 518112 - 518124 + g 72 -6.9 -4.21275 | overlap 518116 CGTATAGACTTCGTC GCGCG TGA TGCGC TTTTCGATCACTTCG TERM 575 518499 - 518516 + g 79 -6.9 -4.56597 | GTGGATGGTGTTGCC CTTGGCG GACA CGCCCAG TTTTTCGGAGCCGAC Bphy_0457 519159 - 519914 + | AzlC family protein Bphy_0458 519911 - 520234 + | branched-chain amino acid transport Bphy_0459 520452 - 521645 + | phosphoglycerate kinase TERM 576 521694 - 521680 - f 73 -11.4 -3.34947 | overlap 521671 521683 CAACAAGCCTCAGAA GACGCG CAA CGCGTC GCGCACGGCAGCGAC Bphy_0460 522131 - 523567 + | pyruvate kinase TERM 577 523792 - 523779 - f 76 -3.1 -4.89393 | gap 1, overlap 523781 GAAATTGCACAAAAA GATGCC GTC GGCA-C AGATTTCGTTTCAAT Bphy_0461 523822 - 524886 + | fructose-bisphosphate aldolase, class II TERM 578 524905 - 524922 + F 79 -12.7 -3.41602 | GTTGTTGCGCACGCA CCTGGCC ATCC GGCCAGG TTGTCGTCAGATCGC TERM 579 524935 - 524964 + F 91 -12.9 -3.99986 | gap 1, overlap 524954 AGGTTGTCGTCAGAT CGCCGTTC-CCGCA TGA TCCGGGGAACGGCG TTTCCCTTTTGTTCC TERM 580 524954 - 524970 + F 86 -8.7 -4.63218 | overlap 524935 GTTCCCGCATGATCC GGGGAAC GGC GTTTCCC TTTTGTTCCGGGCGG TERM 581 525455 - 525439 - g 71 -7.9 -4.08216 | overlap 525448 CGAGGGTCTGCAAAA CGCGCAG AAG CTGCCCG AGCCGATCTTCACGC Bphy_0462 525017 - 525907 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Bphy_0463 525932 - 526441 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Bphy_0464 526516 - 527724 + | phosphoribosylaminoimidazole carboxylase, ATPase subunit Bphy_0465 527737 - 528780 + | Sua5/YciO/YrdC/YwlC family protein TERM 582 528841 - 528816 - T 100 -20.5 -4.85782 | opp_overlap 528816 CCTTCCAAAAACAAA GAGCCCGGCTC GCGA GAGCCGGGCTC TTTTGCATCGCAGGA TERM 583 528816 - 528841 + T 100 -20.5 -4.18018 | opp_overlap 528816 CCTTCCAAAAACAAA GAGCCCGGCTC GCGA GAGCCGGGCTC TTTTGCATCGCAGGA Bphy_0466 530082 - 528871 - | GDSL family lipase TERM 584 530047 - 530008 - G 93 -17.2 -3.54741 | gap 1, overlap 529995 GACGAGCGTCGCAAA TGCCGCGCATGCGACGGCG ATC CGC-GCCGCACGCACGACA TGCACGACGCCAGTG Bphy_0467 530670 - 530287 - | hypothetical protein TERM 585 530865 - 530892 + r 90 -10.6 -4.66264 | gap 1, opp_overlap 530858 530864, overlap 530866 CTTCAATAGAAGGAT TCCTCAGTG-CGC GCC GCGGCGCTGAGGG TTTTTCCGGATTTTG TERM 586 530866 - 530891 + r 76 -11.9 -3.38674 | gap 1, opp_overlap 530858 530864, overlap 530865 TTCAATAGAAGGATT CCTCAGTG-CGC GCC GCGGCGCTGAGG GTTTTTCCGGATTTT Bphy_0468 532421 - 530868 - | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 587 532438 - 532401 - G 84 -11.8 -3.96216 | GGCGCACGCAAACAA CACGGCGGCAGCGCGC GACACG GCGCGAGGCCTCCGCG ACGGCGGCACGAAAC Bphy_0469 532855 - 533517 + | two component transcriptional regulator Bphy_0470 533522 - 534823 + | integral membrane sensor signal transduction histidine kinase Bphy_0471 534937 - 536439 + | protease Do TERM 588 536556 - 536522 - f 90 -10.7 -4.65895 | gap 1, opp_overlap 536523, overlap 536523 CCGGTCATGGAAAAA GTGGCGGTTCGCTGCG TGTT CG-AGCGAGCCGCCAT TCTTCGTACAGGTCC TERM 589 536555 - 536523 - f 87 -14.2 -3.39216 | gap 1, opp_overlap 536523, overlap 536522 CGGTCATGGAAAAAG TGGCGGTTCGCTGCG TGTT CG-AGCGAGCCGCCA TTCTTCGTACAGGTC TERM 590 536523 - 536555 + F 100 -16.4 -3.72324 | gap 1, opp_overlap 536523 536522 CGGTCATGGAAAAAG TGGCGGTTCGCTGCG TGTT CG-AGCGAGCCGCCA TTCTTCGTACAGGTC TERM 591 536596 - 536578 - f 73 -13.1 -2.72049 | TACAGGTCCGAATTA GGCGGCG CTCCC CGCCGCC ACGCAATGCGTACGC Bphy_0472 536681 - 537178 + | hypothetical protein TERM 592 537371 - 537387 + F 72 -9.3 -3.77196 | opp_overlap 537368 ATGTGCTACGAAGGG CGCGCAG GCG CGGCGCG TTTGGTCAATAATGA TERM 593 537404 - 537424 + F 84 -12.6 -3.66178 | opp_overlap 537400 537404 537408 TTGGTCAATAATGAA GCCACGGA CACGC TCCGTGGC TTTCGCATTCGAAGC TERM 594 537424 - 537404 - f 81 -12.6 -3.53444 | opp_overlap 537404, overlap 537400 537408 TTGGTCAATAATGAA GCCACGGA CACGC TCCGTGGC TTTCGCATTCGAAGC Bphy_0473 537575 - 538018 + | hypothetical protein Bphy_0474 538052 - 538798 + | carbon monoxide dehydrogenase subunit G Bphy_0475 539938 - 538886 - | AraC family transcriptional regulator TERM 595 540557 - 540535 - g 73 -12.6 -3.40403 | GGTGCCCTATGAGAA CAGCGCGGGC TTT GCCAGCGCCG AAGAAATTCATCGCG Bphy_0476 540086 - 540715 + | isochorismatase hydrolase Bphy_0477 541443 - 540808 - | TetR family transcriptional regulator Bphy_0478 541870 - 543120 + | RND family efflux transporter MFP subunit TERM 596 544519 - 544575 + G 71 -9.4 -3.69323 | gap 1, overlap 544522 TGGCGTTCTCGGGCG GTTCGGTCGGCGCGATCTATCGTCAGT TCTC GCTGACGATCG-TCGCGGCGATGGTGC TTTCCGTGCTGGTCG Bphy_0479 543138 - 546332 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 597 546628 - 546664 + G 100 -20.2 -3.02144 | opp_overlap 546623 GTGCTGAACATCGAG GCTTCGCGCGCGCAAT ATCAG ATTGCGCGCGCGGCGC TGTTCCCGGCGCTCG TERM 598 547047 - 547082 + G 72 -11 -3.53012 | overlap 547075 547078 GGCTCAGACCGTTGT CGAGCAGGCGACTGCG AACC TGCAGTCGCAGGCGCG TTTGCGGGCGCAGGC TERM 599 547372 - 547411 + G 75 -13.6 -3.01712 | gap 1, opp_overlap 547369 CTGTTCAAGCCAGGT TCGGCGGCGTGGAGCTTCG CGC CGACGATC-ACGCTGCCGA TCTTCGAAGGCGGCC TERM 600 547780 - 547804 + G 77 -15.7 -2.52464 | opp_overlap 547744 547768 547770 GAACATGCAGGCGAT CAGCCGCGTCC GGC GGACGCGCCTG TCGATTACGGCGCGG Bphy_0480 546343 - 547860 + | RND efflux system outer membrane lipoprotein TERM 601 547924 - 547905 - T 100 -15 -4.13767 | opp_overlap 547905 TTTCCGACTGCAAAA CGCCACGG CATG CCGTGGCG TTTTTTTTGCGCGCT TERM 602 547905 - 547924 + T 100 -15 -5.75945 | opp_overlap 547905 TTTCCGACTGCAAAA CGCCACGG CATG CCGTGGCG TTTTTTTTGCGCGCT Bphy_0481 549521 - 548106 - | xanthine permease TERM 603 549360 - 549347 - G 83 -2.4 -5.21709 | TCCCACAGGAAAAAA GATC GGCGCT GATC AGAAAGGCGATTTGC Bphy_0482 549945 - 551369 + | carbohydrate kinase FGGY TERM 604 551902 - 551874 - g 81 -10.9 -4.1891 | opp_overlap 551854 GTCGCGCAAGACAAA CCTGTGTCAGGCG ATC CGCGCGACGCAGG GCAAGGGCCTGATGC Bphy_0483 551563 - 552669 + | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase TERM 605 552750 - 552770 + G 75 -7.6 -4.29325 | gap 1 AGCCACGAGTCGAAG GCG-ATCGG CTTG CCGATGCGC TTTTCCGTCTTCATG TERM 606 552923 - 552869 - g 80 -14.9 -3.14344 | gap 2, overlap 552899 GACGTTTCCGATCAA GGCGGGCGCG--CAGCGCTTCGCCGCA CAG CACGGCATCGCGCTGATCGCGCCCGAC ACCAGTCCGCGCGGC Bphy_0484 552681 - 553526 + | S-formylglutathione hydrolase TERM 607 553581 - 553557 - T 100 -17.2 -4.61873 | opp_overlap 553557 GTGTAGAAAGCAAAA CGGGGTGGCT CCTTT AGCCACCCCG TTTCTTTTCGCGCTA TERM 608 553557 - 553581 + T 100 -17.2 -4.65933 | opp_overlap 553557 GTGTAGAAAGCAAAA CGGGGTGGCT CCTTT AGCCACCCCG TTTCTTTTCGCGCTA Bphy_0485 554385 - 553594 - | ABC-3 protein Bphy_0486 555307 - 554378 - | ABC transporter related TERM 609 555035 - 554993 - G 80 -14.7 -3.15663 | gap 1 AGCCATCGCCACGAA GTCGCGACCGCGCACGCGCC GGCC GGCGAGCGCGCTG-CGCGTC TGCGGCATATAGCCG Bphy_0487 556233 - 555304 - | periplasmic solute binding protein Bphy_0488 556782 - 556291 - | ferric uptake regulator family protein TERM 610 556869 - 556847 - H 87 -4.1 -5.42259 | opp_overlap 556865 GTATCTCGAAAAAAA TGTCATTGC CCGTT GCAACGTCA TCGCCGATTCTTAAT Bphy_0489 557071 - 557853 + | short-chain dehydrogenase/reductase SDR TERM 611 558156 - 558140 - g 85 -7.9 -4.63932 | GATTCTGGAAGAAAA CGTGCTG CGT CAGCGCG CGACGACGGACATCA TERM 612 559106 - 559088 - g 77 -12.4 -3.60627 | opp_overlap 559081 GCATCCGACGGCAAA GCCCGTGC CGT ACACGGGC GTGCAGTTCGTCGGT Bphy_0490 557943 - 559265 + | extracellular solute-binding protein TERM 613 559427 - 559387 - f 79 -12.5 -3.3785 | overlap 559388 GGAACCGATGCACAA CGCCGGCCGACAGTGCAGT TCA ACTGCATCGTCAGCCGGAC TCCTGGCAGCACAGT TERM 614 559426 - 559388 - f 84 -16 -2.62389 | overlap 559387 GAACCGATGCACAAC GCCGGCCGACAGTGCAGT TCA ACTGCATCGTCAGCCGGA CTCCTGGCAGCACAG Bphy_0491 559490 - 560428 + | binding-protein-dependent transport systems inner membrane component Bphy_0492 560425 - 561291 + | binding-protein-dependent transport systems inner membrane component Bphy_0493 561288 - 561980 + | HAD family hydrolase Bphy_0494 562070 - 563179 + | ABC transporter related TERM 615 563201 - 563235 + F 87 -15.8 -2.91593 | opp_overlap 563201 563204, overlap 563205 GCGTTACATCGCAAA CAGGGCGCCGTTGC TATCGCT GCAACGGCGCTTTG CTTTATGAAAGACTC TERM 616 563235 - 563201 - f 78 -11.4 -3.63627 | opp_overlap 563201 563205, overlap 563204 GCGTTACATCGCAAA CAGGGCGCCGTTGC TATCGCT GCAACGGCGCTTTG CTTTATGAAAGACTC TERM 617 563205 - 563231 + F 100 -15.2 -4.13995 | opp_overlap 563204 563201, overlap 563201 TACATCGCAAACAGG GCGCCGTTGC TATCGCT GCAACGGCGC TTTGCTTTATGAAAG TERM 618 564837 - 564858 + G 71 -9.3 -3.71527 | overlap 564829 CCTCGCCGCGCTCGA GCCGCTCGC TTCC GTGCGCGGC TTTGCGTGGTTCGCG Bphy_0495 563428 - 565206 + | TPR repeat-containing protein Bphy_0496 566203 - 565235 - | DeoR family transcriptional regulator Bphy_0497 567799 - 566315 - | xylulokinase TERM 619 566410 - 566372 - G 77 -12.5 -3.56987 | CACATGACGATACAA CGCGCGATAGCTG-GCGAG CCG CTCGCGCAGC-ACCGCGTG CCGCTGCGGATTCGG TERM 620 567649 - 567614 - G 75 -12.5 -3.53761 | gap 1, opp_overlap 567619, overlap 567615 GAACTGTTCCGCAAA GCGCTCGCGCAGCGCG AACAG CGCGGTGCGCGTGC-C TTGCCACCAGTCGGA TERM 621 567619 - 567645 + g 73 -15.1 -2.52543 | opp_overlap 567614 567615 GTTCCGCAAAGCGCT CGCGCAGCGCG AACAG CGCGGTGCGCG TGCCTTGCCACCAGT Bphy_0498 569379 - 567970 - | mannitol dehydrogenase domain-containing protein TERM 622 568823 - 568855 + g 77 -13.4 -3.30771 | AGGAACTGCGTCATG CCTGCGCGGAAGCG CTCGC CGTTGCTGCGCAGG TTATCGCACGTCTGC TERM 623 570821 - 570805 - g 78 -13.7 -3.20723 | opp_overlap 570808, overlap 570808 CTTCCAGCAACTGAA CGACGCG AGC CGCGTCG CTTCCGAAGCGGCAG TERM 624 570931 - 570891 - g 90 -15.4 -3.53012 | gap 1, opp_overlap 570882 TGCCCGCCGCGCAAA CGCAGGTTCATGCGCACGG CCAG CCGCGCGC-CGCACCCGCG CATCCGCCTCGCGGT Bphy_0499 569948 - 570967 + | AraC family transcriptional regulator Bphy_0500 571056 - 572021 + | periplasmic binding protein/LacI transcriptional regulator TERM 625 572304 - 572336 + G 81 -13.4 -3.57561 | CACTTCATGAGCTAT CACGATGCCGTGGC GGCCG GCGTCGGCATCGTG TTTCAGGAGTTCAGC Bphy_0501 572085 - 573620 + | ABC transporter related Bphy_0502 573607 - 574608 + | monosaccharide-transporting ATPase TERM 626 575445 - 575428 - g 74 -10.5 -3.7108 | opp_overlap 575438, overlap 575405 ATGTCTACATCGAAA CGACGGG CGTG CCCGCCG GCGTGAATCAGGGCA Bphy_0503 574653 - 575741 + | alcohol dehydrogenase TERM 627 575803 - 575770 - f 78 -6 -4.62069 | gap 1, overlap 575774 CCGTCATTCGAAAAA TGCACAGTGCGCGTC GTGCA GACGCGCAC-ACGGA GACACTATGAATTAC Bphy_0504 575810 - 577354 + | xylulokinase Bphy_0505 577351 - 578091 + | short-chain dehydrogenase/reductase SDR Bphy_0506 579175 - 578240 - | tryptophan 2,3-dioxygenase Bphy_0507 580436 - 579186 - | kynureninase TERM 628 579496 - 579510 + g 70 -2.1 -4.59773 | gap 1 TCGATGAACAGATCC GTCAGC GCCA GC-GAC TTTTTGCGGATCGCC Bphy_0508 581112 - 580483 - | arylformamidase Bphy_0509 581244 - 581747 + | AsnC family transcriptional regulator Bphy_0510 582321 - 581797 - | flavin reductase domain-containing protein Bphy_0511 582616 - 583167 + | peptide methionine sulfoxide reductase TERM 629 583237 - 583252 + T 100 -11.8 -5.26119 | GCCGTTGTTCGACTA CGCGGC TTCG GCCGCG TTTTCTTTTTGCGCG Bphy_0512 584373 - 583234 - | hypothetical protein TERM 630 584220 - 584235 + g 72 -8.2 -4.08216 | GGGAAGCGGCGAGGA CGTCGC GGGC GCGGCG TTTTCCAGGCGGTGG Bphy_0513 585670 - 584456 - | cyclopropane-fatty-acyl-phospholipid synthase Bphy_0514 586484 - 585846 - | pyridoxamine 5'-phosphate oxidase TERM 631 586106 - 586126 + g 72 -8.2 -4.16016 | GCGAGCCGACGGGAC GCGAAGCG AAGTA CGCATCGC TTTCTTCGGGACTCG Bphy_0515 586736 - 587596 + | UBA/THIF-type NAD/FAD binding protein TERM 632 587645 - 587629 - T 100 -10.8 -5.26875 | opp_overlap 587629 GCGTGAATCAAAAAA CGCGGC TCGTG GCCGCG TTCTTTCGTAGTCGC TERM 633 587629 - 587645 + T 85 -11.5 -4.0274 | opp_overlap 587629 GCGTGAATCAAAAAA CGCGGCT CGT GGCCGCG TTCTTTCGTAGTCGC Bphy_0516 588535 - 587687 - | thioredoxin Bphy_0517 589530 - 588649 - | pirin domain-containing protein TERM 634 589462 - 589439 - G 73 -13.9 -2.81312 | overlap 589426 AACGGACCGACGAGA CGTGCTGCC ATCGCG GGCAGCACG CGCCGCACGGCGAGA TERM 635 589699 - 589689 - H 74 -2.4 -4.96646 | CGATACAAGTAAAAA CAGG AGT CCAG ATGTCGCCGAAAGAC TERM 636 589968 - 589990 + G 77 -5.4 -4.62471 | overlap 589961 589982 CGGCAGGTCTTGCGT CGCTCGTGCT GCA GGCGCAGGCG TTTTTCACGCTTGGC TERM 637 589999 - 590015 + G 83 -5.7 -4.87665 | overlap 589982 GCAGGCGTTTTTCAC GCTTGGC TTT GCCGCGC TTTTTCTGCATGAGC Bphy_0518 589700 - 590581 + | hypothetical protein TERM 638 590621 - 590633 + T 70 -4.7 -4.45175 | overlap 590622 ATTCTTGCATGCGGC GCGGC TTT GCCGG TTTGGTTTTTTGCTC Bphy_0519 592258 - 590711 - | N-acetylmuramoyl-L-alanine amidase Bphy_0520 592794 - 592240 - | hypothetical protein TERM 639 593137 - 593100 - g 71 -9.2 -3.76781 | opp_overlap 593100 593103 593127 AAACATGGGATGAAA CGTGCGCG-GCCAGCC GAGCTTGT GGCCGGCACGCG-ACG CGTGATCTCGGTTCG Bphy_0521 592812 - 594104 + | iron-sulfur cluster binding protein Bphy_0522 594145 - 594615 + | methylated-DNA--protein-cysteine methyltransferase Bphy_0523 594612 - 595559 + | tyrosine recombinase XerD Bphy_0524 597161 - 595584 - | AMP-dependent synthetase and ligase Bphy_0525 597309 - 597836 + | ybaK/ebsC protein TERM 640 598455 - 598467 + G 70 -5.5 -4.32857 | overlap 598438 598451 GGCGATCTTCGCGCC GCTGT TCG ACGGC TTTCTGTTTGGCGCG TERM 641 598607 - 598597 - g 84 -8.2 -4.51812 | overlap 598575 598598 598599 GGCGACAAGAAGAAA GCCG AAG CGGC GGCTTCGCACAAGCA Bphy_0526 597994 - 598626 + | hypothetical protein Bphy_0527 599187 - 598702 - | hypothetical protein TERM 642 599102 - 599137 + g 78 -3.9 -4.75174 | gap 1 CCCTTGAAGTCGAAG CGCG-TCGAGATTTCC TTGTT GGACTGCTCGATCGCG TTTTTCACTTCGATC Bphy_0528 599359 - 600399 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 643 600439 - 600471 + T 86 -12 -4.07568 | opp_overlap 600444, overlap 600444 CGCGAGCCTGAAAAC AAAAAGCGCCGGGT GTCGA ACCCGGCGCTTATG TTTTGCGGACGGCGC TERM 644 600466 - 600444 - T 100 -16.3 -5.45802 | opp_overlap 600439 600444 GCCTGAAAACAAAAA GCGCCGGGT GTCGA ACCCGGCGC TTATGTTTTGCGGAC TERM 645 600444 - 600466 + T 100 -16.3 -3.95435 | opp_overlap 600444, overlap 600439 GCCTGAAAACAAAAA GCGCCGGGT GTCGA ACCCGGCGC TTATGTTTTGCGGAC Bphy_0529 601428 - 600499 - | ornithine carbamoyltransferase TERM 646 600540 - 600559 + g 70 -5.6 -4.20696 | overlap 600538 600556 GAAATTCCATCAGCG CCTTCTGC ACGT GCAGGCGG TTTTCCGCTTCGTCC Bphy_0530 601890 - 602225 + | hypothetical protein TERM 647 602268 - 602281 + T 100 -9.5 -5.74122 | opp_overlap 602268 AGGACGGCAATGAAA CCCGC ATCG GCGGG TTTTTTTATGTCCTC TERM 648 602281 - 602268 - T 75 -9.5 -3.92178 | opp_overlap 602268 AGGACGGCAATGAAA CCCGC ATCG GCGGG TTTTTTTATGTCCTC TERM 649 602374 - 602345 - T 81 -12.9 -3.55815 | opp_overlap 602352, overlap 602352 AAACAGCGCGCCAAA CAAAAAAGCCCGC CAGA GCGGGCTTTCATG ACGCAGCGGAAACAG TERM 650 602352 - 602367 + T 81 -11.8 -3.72576 | opp_overlap 602345 602352 GCGCCAAACAAAAAA GCCCGC CAGA GCGGGC TTTCATGACGCAGCG TERM 651 602367 - 602352 - T 100 -11.8 -5.63517 | opp_overlap 602352, overlap 602345 GCGCCAAACAAAAAA GCCCGC CAGA GCGGGC TTTCATGACGCAGCG TERM 652 602414 - 602393 - T 73 -11.5 -3.46285 | CAGCGGAAACAGGAA GCGGCCCGC CGAA GCGAGCCAC CGGATTCGTGAATTT Bphy_0531 602706 - 602428 - | ribosomal protein S20 TERM 653 602469 - 602497 + g 74 -10.3 -3.79678 | overlap 602465 602472 602495 CCTTGACGGCTGCAG CGAGGCGGCTC TTATGGC GAGCTGCCTTG TTCTTGTGAACGATT TERM 654 602472 - 602494 + g 72 -8.4 -4.02817 | overlap 602465 602469 TGACGGCTGCAGCGA GGCGGCTC TTATGGC GAGCTGCC TTGTTCTTGTGAACG TERM 655 602495 - 602510 + g 78 -4 -4.77165 | overlap 602469 602497 TTATGGCGAGCTGCC TTGTTC TTGT GAACGA TTTTCTTGTCGGCAA TERM 656 602733 - 602763 + H 80 -9.6 -4.18018 | overlap 602734 602736 ATCCTGTTCCTGTTT CCAGTGCCCGCCTT CGA AGGGCAGGCGCTGC TTTTAGATCGAACCC TERM 657 602734 - 602762 + H 76 -13.1 -3.10597 | overlap 602733 602736 TCCTGTTCCTGTTTC CAGTGCCCGCCTT CGA AGGGCAGGCGCTG CTTTTAGATCGAACC TERM 658 603672 - 603714 + G 80 -14.8 -3.14344 | overlap 603668 CTCGCTGCCCGCGTT CGCGCCCGTGCTGCTGAACG TCT CGTTCATCATCGCGGCCGTG TTCGTCGCGCCGCTC Bphy_0532 603187 - 604737 + | integral membrane protein MviN Bphy_0533 604734 - 605585 + | hypothetical protein TERM 659 605648 - 605609 - T 100 -20.2 -3.53012 | opp_overlap 605615, overlap 605610 605615 GTCCGTCGCTGCAAA CGAAAACGCCTGCGCAGC TTTC ACTACGCAGGCGTTTTCA TTCCAGCGCTATCGG TERM 660 605647 - 605610 - T 100 -21.5 -2.71712 | opp_overlap 605615, overlap 605609 605615 TCCGTCGCTGCAAAC GAAAACGCCTGCGCAGC TTTC ACTACGCAGGCGTTTTC ATTCCAGCGCTATCG TERM 661 605642 - 605615 - T 100 -15.6 -4.54727 | opp_overlap 605615, overlap 605610 605609 CGCTGCAAACGAAAA CGCCTGCGCAGC TTTC ACTACGCAGGCG TTTTCATTCCAGCGC TERM 662 605615 - 605642 + T 93 -12.7 -4.4078 | opp_overlap 605615 605610 605609 CGCTGCAAACGAAAA CGCCTGCGCAG CTTTCA CTACGCAGGCG TTTTCATTCCAGCGC Bphy_0534 606424 - 605666 - | short-chain dehydrogenase/reductase SDR TERM 663 606625 - 606608 - R 100 -9.8 -5.63517 | TGCCCAAATAAAAAA CCCGCC GTGAGA GGCGGG TTCCCGATGTGCTAC Bphy_0535 607317 - 606652 - | nucleoside-triphosphate--adenylate kinase Bphy_0536 608382 - 607579 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase TERM 664 608442 - 608420 - R 88 -14.1 -3.52906 | opp_overlap 608419 608420, overlap 608418 CGAGGCTGAGAAAGA CGCACCGCC TCGAT GGCGGCGCG GTGTGTGCGTTCGGA Bphy_0537 608717 - 608514 - | hypothetical protein Bphy_0538 609714 - 608698 - | tetraacyldisaccharide 4'-kinase TERM 665 611318 - 611342 + G 70 -11.3 -3.37796 | GTCGGCGGGTGTGCG GCCCGTGCGCG ATG CGCGTGCGCGC TTCTCGCTCGTGCAG Bphy_0539 610302 - 611681 + | exodeoxyribonuclease VII, large subunit TERM 666 611755 - 611767 + F 82 -10.5 -4.11216 | opp_overlap 611730 611748 611750 GCATTAATTACGCTG CGCGC ACA GCGCG TTTTCGCAATGAACG Bphy_0540 611889 - 612467 + | superoxide dismutase TERM 667 612534 - 612517 - T 90 -11.3 -4.2558 | opp_overlap 612517 CAGCGTCGACGAAAA GCCCTCA TTCA TGAGGGC TTTTTCTTTTTCAGA TERM 668 612517 - 612534 + T 100 -11.3 -5.61881 | opp_overlap 612517 CAGCGTCGACGAAAA GCCCTCA TTCA TGAGGGC TTTTTCTTTTTCAGA TERM 669 612672 - 612651 - T 100 -10.8 -5.1861 | opp_overlap 612651 612657 CGCAGCAGTAAAAAA GCGCCACG CCGTAC CGCGGCGC TTTCACATGACGTCT Bphy_0541 614011 - 612689 - | hypothetical protein TERM 670 613936 - 613958 + g 72 -9 -4.11216 | ATTTCTCGTATTTCG CATCGCGCAC GCC GAGCGCGACG TTTTCGAAATCACAG Bphy_0542 614698 - 614099 - | isochorismatase hydrolase TERM 671 614223 - 614199 - G 75 -6.4 -4.34402 | gap 1, opp_overlap 614200 614202 TGCTCGACAGGAAAA CGGTGCGTGTC GGCC GACAGGC-CCG ACATCGCGTCTTCGA TERM 672 614579 - 614536 - G 95 -13 -4.26076 | gap 1, overlap 614539 614540 CGACGCGCACGAAAA CAACCGTGCCGCCCGCCGCGC GCA GCGCATCGG-CGGCACGCACG GAACGCGCGACGACG TERM 673 614576 - 614539 - G 100 -15.5 -4.25256 | gap 1, overlap 614536 614540 CGCGCACGAAAACAA CCGTGCCGCCCGCCGCGC GCA GCGCATCGG-CGGCACGC ACGGAACGCGCGACG TERM 674 614575 - 614540 - G 93 -19 -3.14672 | gap 1, overlap 614539 614536 GCGCACGAAAACAAC CGTGCCGCCCGCCGCGC GCA GCGCATCGG-CGGCACG CACGGAACGCGCGAC TERM 675 614785 - 614773 - g 81 -7.7 -4.53034 | overlap 614775 614776 CTCAGATAATCAAAA GATGC GGC GCATC CCGCGACAGGAACGT Bphy_0543 614747 - 615358 + | TetR family transcriptional regulator Bphy_0544 616033 - 615380 - | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 676 615939 - 615913 - G 75 -10.1 -3.91882 | opp_overlap 615913, overlap 615908 CGACCAGAAACACAA TCCGCTCGCGC AAGAG GCGCGAGTAGA TGTCGTAGGCGCGCT TERM 677 616699 - 616673 - g 75 -10.1 -3.9122 | gap 1, overlap 616670 CATCGCGCGAAAGAA CGCCTGCAGCGC CAAG GCG-TGCCGGCG AAGCGGGCCGATCCC TERM 678 616759 - 616787 + G 70 -5.2 -4.37886 | gap 1, opp_overlap 616759 GCGGGCGGCAATGGA GGCGCAGGATCGC GTGG GCC-TCGTGCGCC TTTTCTGCGACGTGC Bphy_0545 616193 - 617152 + | ECF subfamily RNA polymerase sigma-24 factor Bphy_0546 618382 - 617108 - | diguanylate phosphodiesterase Bphy_0547 620122 - 618653 - | EmrB/QacA family drug resistance transporter Bphy_0548 621650 - 620238 - | transcriptional regulator TERM 679 620304 - 620271 - G 87 -5.9 -5.00616 | gap 1, opp_overlap 620272 620273, overlap 620273 620274 TGCCGCTTCAAAAAA CATCCGCGCACGCG GCTCATT CGCGAACGCGG-CG TTGATGCGAATCCAC TERM 680 620303 - 620273 - G 71 -7.4 -4.13561 | opp_overlap 620272 620273, overlap 620271 620274 CCGCTTCAAAAAACA TCCGCGCACGCG GCTCATT CGCGAACGCGGC GTTGATGCGAATCCA TERM 681 621825 - 621812 - H 75 -3.7 -4.75174 | GATGCAAGCGAAAAA GCACC TCAA GGAGC AAAACGATGCGCGAA Bphy_0549 621832 - 622143 + | hypothetical protein Bphy_0550 623414 - 622170 - | citrate synthase TERM 682 622343 - 622375 + g 77 -15.5 -2.62184 | CGCGCTCGATGGCCG CGAGCGCGTAGTCGA CGG TCGGCTCCGCGCCCG TCGTGTCGCGCACGG TERM 683 623026 - 623065 + g 80 -17 -2.52464 | gap 1 GACCATTGAGCAGCC GCGAGCGGCGCGGCGGGCG CGG CGAC-GACGCGCCGCGCGC TGCATTCCCACAGCA Bphy_0551 623533 - 624927 + | L-carnitine dehydratase/bile acid-inducible protein F Bphy_0552 625701 - 624955 - | GntR family transcriptional regulator Bphy_0553 625881 - 626726 + | aldo/keto reductase Bphy_0554 626781 - 627248 + | hypothetical protein Bphy_0555 629527 - 627422 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Bphy_0556 630423 - 629524 - | binding-protein-dependent transport systems inner membrane component Bphy_0557 631430 - 630420 - | binding-protein-dependent transport systems inner membrane component TERM 684 631379 - 631365 - G 72 -12.8 -3.14132 | GCGTGTCGCCACGAA GCGCGC GAT GCGCGC TGCACTGCTGCCTGA Bphy_0558 633145 - 631460 - | extracellular solute-binding protein TERM 685 632471 - 632489 + g 71 -10.2 -3.56325 | GTTGCCCGCGTAATT CGCGGGCA GGA TGACCGCG TTGTAGTTGTCCGAC TERM 686 633322 - 633366 + r 71 -7.6 -4.08767 | opp_overlap 633306 633324, overlap 633323 TTGTGTCGTACGCAC AACGGCGCGGCGCGGGCTAG TCCGC CTGGCGCGTGCTGCGGCGCC TTTTACGGCGCTCGG Bphy_0559 634423 - 633404 - | high-affinity nickel-transporter Bphy_0560 634937 - 634452 - | cupin 2 domain-containing protein TERM 687 635133 - 635111 - R 100 -12.7 -5.27023 | ACCGCAAAAACAAAA GGCCCGTCC AAAAA GAACGGGCC TTCGCGACGAGCGAA Bphy_0561 637259 - 635154 - | translation elongation factor G TERM 688 637481 - 637455 - R 100 -17.3 -4.62336 | gap 1, opp_overlap 637452 637455 637476 AGCGGACGCGAAAAA GCCGGCGC-GCC TTGC GGCTGCGCCGGC TCGTGTTCCAGCCCC TERM 689 637455 - 637481 + r 89 -17.3 -2.73875 | gap 1, opp_overlap 637455, overlap 637452 637476 AGCGGACGCGAAAAA GCCGGCGC-GCC TTGC GGCTGCGCCGGC TCGTGTTCCAGCCCC Bphy_0562 638042 - 637527 - | hypothetical protein TERM 690 638128 - 638103 - H 100 -11.1 -5.61881 | opp_overlap 638103 CGTCAAAAACAAAAA GGCAGAGAGCC TTGC GGCCATCTGCC TTTCAACGCCGTAAG Bphy_0563 638164 - 638406 + | hypothetical protein TERM 691 638669 - 638706 + T 83 -8.3 -4.58213 | gap 1, opp_overlap 638670, overlap 638670 638679 TACGCGTCGCAGAGT ACGCGAT-CGAGCGCCGC GTG GCGGCGCTGGTGTGGCGC TTTTATACTTCGTTC TERM 692 638670 - 638705 + T 76 -11.8 -3.33843 | gap 1, opp_overlap 638670, overlap 638669 638679 ACGCGTCGCAGAGTA CGCGAT-CGAGCGCCGC GTG GCGGCGCTGGTGTGGCG CTTTTATACTTCGTT TERM 693 638679 - 638695 + T 81 -15.1 -2.64375 | opp_overlap 638670, overlap 638670 638669 AGAGTACGCGATCGA GCGCCGC GTG GCGGCGC TGGTGTGGCGCTTTT Bphy_0564 639384 - 638815 - | pseudouridine synthase TERM 694 638920 - 638889 - G 89 -5 -5.15969 | overlap 638891 GCCCAAGGGAAAAAA TATCGAGCGCGCCA ACGC CGACACGCACGAGA CGCAGCGTCGGAAAG TERM 695 638918 - 638891 - G 75 -7.6 -4.20888 | overlap 638889 CCAAGGGAAAAAATA TCGAGCGCGCCA ACGC CGACACGCACGA GACGCAGCGTCGGAA TERM 696 639739 - 639774 + G 73 -9.1 -3.92075 | gap 1, opp_overlap 639732 TCAGCACATCACGGT TCC-CGCTGACGGTGA CAAGA TCACTGTCAACGCGGA TTTCTCGCTCAACGT TERM 697 639921 - 639909 - g 79 -4.1 -4.89477 | GCGGCAAGAAGAAAA TCCAC TGG ATGGA AATCTTCGCGGGCGA Bphy_0565 639716 - 640972 + | isocitrate dehydrogenase, NADP-dependent TERM 698 641002 - 641038 + T 72 -4.4 -4.66833 | gap 1, opp_overlap 641007 641008, overlap 641008 GTCCTTGTATCGTGA CGAAACCCCCGGCGAGT GCGA ACCTGTCG-GGGTTTCA TTTTTGAGCTTCCCG TERM 699 641008 - 641033 + T 81 -8.9 -4.32649 | opp_overlap 641007 641008, overlap 641002 GTATCGTGACGAAAC CCCCGGCGAGT GCGA ACCTGTCGGGG TTTCATTTTTGAGCT TERM 700 642719 - 642735 + T 80 -10.8 -4.09685 | opp_overlap 642719 CCAGAAACGAAAAAA CCCGGC ATGAA GCCGGG TTTTCAAGGCTGCGG TERM 701 642735 - 642719 - T 100 -10.8 -5.42514 | opp_overlap 642719 CCAGAAACGAAAAAA CCCGGC ATGAA GCCGGG TTTTCAAGGCTGCGG Bphy_0567 642967 - 642761 - | cold-shock DNA-binding domain-containing protein TERM 702 643566 - 643556 - g 70 -2.4 -4.71426 | GCGGCAGGAACAAAA GCTG AAA CCGC CGGCCATGTTCAAGG Bphy_0568 643500 - 643814 + | ATP-dependent Clp protease adaptor protein ClpS TERM 703 644198 - 644220 + G 76 -2.7 -4.86731 | gap 1, overlap 644199 CTGCAACAGCAGGGC GTGACG-CGT CTCG ACGTCGTCAA TTTTATTTCGCACGG TERM 704 644837 - 644819 - g 89 -10.2 -4.58395 | opp_overlap 644801 644818 644819 644821 GGCATCTTCGAAAAA GACGCGGC GTT GTCGCGTC GTTTCCAGAAGATCG Bphy_0569 643811 - 646111 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 705 646140 - 646165 + T 100 -16.2 -4.55798 | opp_overlap 646140 CGAAGCACGAACGAA CGGCGTGGGT GTCACA ACCCACGCCG TTTTGCTTTGCCATC TERM 706 646165 - 646140 - T 89 -16.2 -3.43151 | opp_overlap 646140 CGAAGCACGAACGAA CGGCGTGGGT GTCACA ACCCACGCCG TTTTGCTTTGCCATC TERM 707 646206 - 646188 - T 78 -8.8 -4.11216 | TTGCCATCCGTAAAA CGCCCG CAAGAAC CGGGCG ACGCCTTCAATGTTT Bphy_0570 646659 - 646213 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Bphy_0571 647728 - 646724 - | luciferase family protein Bphy_0572 649013 - 647802 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 708 648440 - 648457 + g 79 -5.5 -4.62069 | gap 1 CTGCCGTTAGCAGCA CGC-GGCG GCC CGTCAGCG TTTTTGGCGTGAAGA Bphy_0573 649663 - 649163 - | lipoprotein signal peptidase Bphy_0574 652500 - 649663 - | isoleucyl-tRNA synthetase TERM 709 651296 - 651314 + g 72 -13.2 -3.09671 | AGCAGCGTGCCCGCT TCGTCGAG CGC CTCGACGA TCTTCGGGTTCGCGT TERM 710 651942 - 651960 + g 78 -3.7 -4.7329 | opp_overlap 651928 AGTTCACCGGCTTCA GGCCGCG GAACA CGTAGCC TTTTTCCATGATTTT Bphy_0575 653680 - 652688 - | riboflavin biosynthesis protein RibF TERM 711 654203 - 654160 - g 71 -13 -3.01712 | gap 1, opp_overlap 654181 654193 TTCCGGGCCTCAAGA CGCACCAGGCAG-CGCTCGAC GCG GGCGTGCGTCTGCACGGCGCG TCCGTGCATTTCGTC TERM 712 654193 - 654211 + G 74 -10.3 -3.72576 | opp_overlap 654160, overlap 654181 ACGCGGGCGTGCGTC TGCACGG CGCGT CCGTGCA TTTCGTCACGCCGAC TERM 713 654398 - 654417 + G 70 -5 -4.45544 | gap 1, overlap 654403 GCGCGTCACCGTGAC GCCGCCTGA GCC TCA-GTGGC TTTTCCTTGATACAA Bphy_0576 653799 - 654464 + | phosphoribosylglycinamide formyltransferase Bphy_0577 654461 - 655720 + | Fmu (Sun) domain-containing protein Bphy_0578 655807 - 657162 + | MscS mechanosensitive ion channel TERM 714 657210 - 657186 - f 74 -2 -5.00616 | gap 1, opp_overlap 657173 657204 TTGGCGGGCAAAAAA CGCCTGCTTCG ACCT CGATGG-GGCG TGTGCCCGGTTGATG Bphy_0579 657363 - 658565 + | fatty acid desaturase TERM 715 658600 - 658627 + F 100 -14.2 -4.58395 | opp_overlap 658606, overlap 658601 658606 AACTTTCGTTACGTC ACAAAACCCCGC GTTG GCGGGGTTTTGC TTTTTGGGCCGTCGG TERM 716 658601 - 658626 + F 93 -17.7 -3.34716 | opp_overlap 658606, overlap 658600 658606 ACTTTCGTTACGTCA CAAAACCCCGC GTTG GCGGGGTTTTG CTTTTTGGGCCGTCG TERM 717 658606 - 658621 + F 100 -11.8 -4.77757 | opp_overlap 658606, overlap 658601 658600 CGTTACGTCACAAAA CCCCGC GTTG GCGGGG TTTTGCTTTTTGGGC TERM 718 658621 - 658606 - f 93 -11.8 -4.4009 | opp_overlap 658606 658601 658600 CGTTACGTCACAAAA CCCCGC GTTG GCGGGG TTTTGCTTTTTGGGC TERM 719 659302 - 659290 - g 81 -4.7 -4.89852 | CTATATCCAGAAAAA GACGG GCG CCGAC ATGCTGCTGTGGCAA Bphy_0580 658697 - 659827 + | quinolinate synthetase complex, A subunit Bphy_0581 659827 - 660729 + | nicotinate-nucleotide pyrophosphorylase TERM 720 660757 - 660785 + T 100 -16.1 -4.8048 | opp_overlap 660757 GCGGTTCAAGGAAAA GGCCATCGACAGT CGC ACTGTCCATGGCC TTTTTCATATGCAGC TERM 721 660785 - 660757 - T 100 -16.1 -4.4078 | opp_overlap 660757 GCGGTTCAAGGAAAA GGCCATCGACAGT CGC ACTGTCCATGGCC TTTTTCATATGCAGC Bphy_0582 662408 - 660810 - | L-aspartate oxidase TERM 722 662432 - 662459 + r 93 -12.6 -4.4078 | opp_overlap 662429 TCCGTCGTAATACGC GGCTGGTGCGGC GAAC GCCGCTGCAGCC TTTTGATTGGGAAAC TERM 723 662630 - 662599 - R 100 -17.4 -4.07568 | opp_overlap 662606, overlap 662600 662606 CGGGGGTGCGCAAAA CCAAAAAGCCCCGC ACAA GCGGGGCTTTTTGT CGTCAACCGGCTGAA TERM 724 662629 - 662600 - R 100 -20.9 -3.04398 | opp_overlap 662606, overlap 662599 662606 GGGGGTGCGCAAAAC CAAAAAGCCCCGC ACAA GCGGGGCTTTTTG TCGTCAACCGGCTGA TERM 725 662623 - 662606 - R 100 -14.1 -5.0925 | opp_overlap 662606, overlap 662600 662599 GCGCAAAACCAAAAA GCCCCGC ACAA GCGGGGC TTTTTGTCGTCAACC TERM 726 662606 - 662623 + r 100 -14.1 -4.91109 | opp_overlap 662600 662599 662606 GCGCAAAACCAAAAA GCCCCGC ACAA GCGGGGC TTTTTGTCGTCAACC Bphy_0583 662820 - 662653 - | ribosomal protein L33 Bphy_0584 663064 - 662831 - | ribosomal protein L28 Bphy_0585 664051 - 663323 - | DNA repair protein RadC TERM 727 663530 - 663572 + g 75 -7.5 -4.25283 | opp_overlap 663530 663544 CGCGCGCCGCACAAT CTCGCGTGGATAGACGGCC ATCCG GGTCAGCGAGCCGCGCGAG TTTTCCTCCGAGCGT Bphy_0586 664241 - 664696 + | peptidylprolyl isomerase FKBP-type Bphy_0587 664699 - 665658 + | hydroxymethylbutenyl pyrophosphate reductase TERM 728 665682 - 665696 + F 100 -12.8 -5.7946 | opp_overlap 665682 CCCTATCAAAAAAAA CGCGCC GCC GGCGCG TTTTTTTATTGCCCC TERM 729 665696 - 665682 - f 100 -12.8 -5.86061 | opp_overlap 665682 CCCTATCAAAAAAAA CGCGCC GCC GGCGCG TTTTTTTATTGCCCC TERM 730 665821 - 665837 + F 70 -2.2 -4.72272 | gap 1, overlap 665822 TAATTTTGCCTCGAA C-GGGTG ATCG CGCCCTG TTTTTCGTACGACGA TERM 731 667041 - 667008 - g 75 -3.8 -4.64598 | gap 1, overlap 667009 GAATCAGGGCAAAAA TCCTTGGCGGCG-AC GGCGT GTGCACCGACAAGGT AGGGGAACTGGCGGG Bphy_0588 666197 - 667396 + | extracellular ligand-binding receptor TERM 732 667417 - 667442 + F 86 -9 -4.66163 | GGACGTACAGCCTGA CGGCACCG GACCATCCGA CGGTGCCG TTTTTGCATCCGCGT Bphy_0589 667624 - 668574 + | inner-membrane translocator Bphy_0590 668602 - 669771 + | inner-membrane translocator Bphy_0591 669794 - 670570 + | ABC transporter related Bphy_0592 670570 - 671286 + | ABC transporter related TERM 733 671338 - 671362 + T 100 -6.4 -5.80951 | overlap 671328 TCGCCTGCGAGCGAA GGCTGCATGT GTCGA GCATGTGGCC TTTTTTGTTTTGGGT Bphy_0593 671910 - 671449 - | GCN5-related N-acetyltransferase TERM 734 671555 - 671530 - G 70 -4.6 -4.37658 | overlap 671531 AAGCGCCTCATAAAA CCCGCGCACA TCGGCT TTCGCGCGGA GCACCTGAAGATTGA TERM 735 671767 - 671748 - G 81 -3.5 -4.99043 | opp_overlap 671748 CGGCGACAAAGAAAA GCTCAGG CTGCGT CGTGAGC TTGTTGGCAATGGAA Bphy_0594 673091 - 671907 - | acetylornithine and succinylornithine aminotransferase TERM 736 673200 - 673183 - g 100 -12.7 -5.24799 | opp_overlap 673183 CCAGAAATACAAAAA GCCACGG CATG CCGTGGC TTTCATGATTCGAAC TERM 737 673183 - 673200 + G 86 -12.7 -3.84246 | opp_overlap 673183 CCAGAAATACAAAAA GCCACGG CATG CCGTGGC TTTCATGATTCGAAC Bphy_0595 673139 - 673366 + | hypothetical protein Bphy_0596 674453 - 673422 - | oxidoreductase FAD/NAD(P)-binding subunit TERM 738 674215 - 674247 + g 80 -8.9 -4.3534 | opp_overlap 674228 674231, overlap 674217 AGGTCGGTGCACGCG GTCGCGCAGCACAGC AGC GCCATGCCGCGCGTC TTTTCGTCGTTCGAC TERM 739 674217 - 674245 + g 74 -10.1 -3.77927 | opp_overlap 674228 674231, overlap 674215 GTCGGTGCACGCGGT CGCGCAGCACAGC AGC GCCATGCCGCGCG TCTTTTCGTCGTTCG TERM 740 674615 - 674626 + G 79 -5.8 -4.66833 | opp_overlap 674614 674615 TGCGGCAACTACAAG GACG CGCG CGTC TTTTTGCGCTTACGA TERM 741 674813 - 674777 - g 81 -3.6 -5.00616 | gap 1 CGCCTCCGCAAAAAA GCGGTGATGCGGACACG CGCA CGCGTTCGC-TGATCGC CACCTTGACGGCGTC Bphy_0597 674491 - 675579 + | NAD-dependent epimerase/dehydratase Bphy_0598 675788 - 675600 - | hypothetical protein Bphy_0599 676658 - 675954 - | pseudouridine synthase TERM 742 676009 - 676042 + g 70 -13.9 -2.53263 | gap 1 CATTGCCACGCGCCC TCGGCGAGTTCG-GCT GGC AGCGCGAGCCCGCCGA TCCGTTCGCGGTGCA TERM 743 676738 - 676697 - R 100 -20.3 -4.2558 | opp_overlap 676691 676704 CACGCGGCATCAAAA CGTCGAAGGCGTTCTTCGA TAAC CCGAAGAACGCCTTCATCG CCTGCATTTTACCTG TERM 744 676704 - 676731 + r 88 -15.7 -3.1706 | opp_overlap 676697, overlap 676691 CATCAAAACGTCGAA GGCGTTCTTCG ATAACC CGAAGAACGCC TTCATCGCCTGCATT Bphy_0600 677900 - 676971 - | hypothetical protein Bphy_0601 678209 - 679609 + | amino acid permease-associated region TERM 745 679645 - 679671 + T 100 -14.5 -5.55855 | gap 1 GTTTGATGCAGTCGA GCCGGATCAGCC GTGA GGC-GATCCGGC TTTTGTTTTTTTCGG TERM 746 680112 - 680088 - T 100 -9.3 -5.31519 | gap 1, opp_overlap 680088 ATAGCCAAACAAAAA CCCCGCTCAG CGTCAT CTG-GCGGGG TTGCATGGCGAACCG TERM 747 680310 - 680299 - T 71 -7.2 -4.10161 | opp_overlap 680305 GATTATGGCCGAAAA CCCG CTCG CGGG CAAGCCAATGCCCTT Bphy_0602 681751 - 680339 - | oxygen-independent coproporphyrinogen III oxidase TERM 748 681385 - 681369 - G 81 -7.9 -4.52589 | overlap 681371 TCGTGCGACAGAAAA GTCGGTG TGC CACCGCC CCAATGCAACTGCGA Bphy_0603 682009 - 682305 + | hypothetical protein TERM 749 682407 - 682427 + G 72 -8.2 -4.13654 | opp_overlap 682359 TGCATGACCCCACCC GCCACGCC CGCAC GGCGTCGC TTTCTGATTTCCGCG Bphy_0604 682395 - 682988 + | hypothetical protein Bphy_0605 683062 - 683898 + | undecaprenol kinase TERM 750 683959 - 683934 - T 100 -15.4 -4.87626 | opp_overlap 683934 GCCCAATATGAAAAA GGCCCGCGGC AGGAAG ACCGCGGGCC TTTTTTGTCTCAGTT TERM 751 683934 - 683959 + T 100 -14.7 -5.38951 | opp_overlap 683934 GCCCAATATGAAAAA GGCCCGCGG CAGGAAGA CCGCGGGCC TTTTTTGTCTCAGTT Bphy_0606 684795 - 683989 - | tRNA (guanine-N(7)-)-methyltransferase TERM 752 684323 - 684291 - G 76 -2.5 -4.86731 | overlap 684293 684294 GGTCGGGAAAGAAAA TATGCACGCCGCCCA GGC TGTGCGGCGCAATCA TGTTTTCGAGCACTT TERM 753 684842 - 684854 + r 77 -2.6 -5.09762 | CACTGAATTGACAGG GCGT GAGGG GCGC TTTTCTTTGTTCGCG TERM 754 684933 - 684914 - R 100 -10.7 -5.26316 | GCACGCTACAAAAAA GCCGCCT TCAGGG AGGCGGC TCTCACGCTGGATTT Bphy_0607 685715 - 685152 - | protein of unknown function YGGT TERM 755 685756 - 685740 - R 95 -7.2 -5.40072 | overlap 685742 TTTCCTTCAAAAAAA CGCCCC GACGG GGGACG CACTGGCGCCGGCAG Bphy_0608 686172 - 685852 - | ethyl tert-butyl ether degradation EthD TERM 756 686910 - 686897 - H 86 -5.9 -5.16151 | TAAAGTGAATAAAAA CCGCC GATC GACGG GCCGTGGTCCCGAGC Bphy_0610 687534 - 687695 + | hypothetical protein Bphy_0611 687927 - 687673 - | hypothetical protein TERM 757 687745 - 687722 - G 74 -10.2 -3.72695 | gap 1, opp_overlap 687723, overlap 687723 ACCGTTTCCAGTAAA GCGCCCGGACC GCT GG-CCGGGCGT TTTTCGTTAACGGCC TERM 758 687723 - 687744 + g 100 -13.7 -4.8622 | gap 1, opp_overlap 687723 687722 CCGTTTCCAGTAAAG CGCCCGGACC GCT GG-CCGGGCG TTTTTCGTTAACGGC TERM 759 687744 - 687723 - G 73 -13.7 -2.83403 | gap 1, opp_overlap 687723, overlap 687722 CCGTTTCCAGTAAAG CGCCCGGACC GCT GG-CCGGGCG TTTTTCGTTAACGGC Bphy_0612 688090 - 688386 + | hypothetical protein TERM 760 688426 - 688471 + T 100 -27.2 -4.36914 | gap 1, opp_overlap 688432, overlap 688432 GCTGCGCGAGCCGGA CGAAAACGGCGCAATGTCGGC TCAAT GCCG-CATTGCGCCGTTTTCG TTTTGTCGACGCGAA TERM 761 688465 - 688432 - T 100 -19 -4.26076 | gap 1, opp_overlap 688426 688432 CGAGCCGGACGAAAA CGGCGCAATGTCGGC TCAAT GCCG-CATTGCGCCG TTTTCGTTTTGTCGA TERM 762 688432 - 688465 + T 100 -19 -4.73108 | gap 1, opp_overlap 688432, overlap 688426 CGAGCCGGACGAAAA CGGCGCAATGTCGGC TCAAT GCCG-CATTGCGCCG TTTTCGTTTTGTCGA Bphy_0613 689183 - 688503 - | lysine exporter protein LysE/YggA TERM 763 688851 - 688827 - G 72 -13.5 -3.14344 | opp_overlap 688826 688823 CACGCCGCGCAGGAA GCCGCGCTTCG GAT CGAGACGCGGC GTCGTTGCGTCGGCT Bphy_0614 690836 - 689259 - | UbiD family decarboxylase TERM 764 691216 - 691235 + H 78 -6.4 -4.62069 | CACATGTAGTCTTCG CCAGCG CACTTCGA CGCTGG TTTTTCGCGTGGGAG Bphy_0615 691442 - 692656 + | lytic transglycosylase catalytic TERM 765 692715 - 692688 - T 86 -8.4 -4.56597 | opp_overlap 692693, overlap 692693 CTGCCTCGGCAAAAA TGAAAGGGCACC TTAC GGTGCCCTTTTT AATGGTCGGCGCGGT TERM 766 692710 - 692693 - T 93 -12.7 -4.32046 | opp_overlap 692693, overlap 692688 TCGGCAAAAATGAAA GGGCACC TTAC GGTGCCC TTTTTAATGGTCGGC TERM 767 692693 - 692710 + T 100 -12.7 -4.77036 | opp_overlap 692693 692688 TCGGCAAAAATGAAA GGGCACC TTAC GGTGCCC TTTTTAATGGTCGGC Bphy_0616 693930 - 692737 - | aminotransferase class I and II TERM 768 693406 - 693418 + g 71 -9.1 -3.75153 | opp_overlap 693402, overlap 693393 693399 CGGCGAAGCGAGCAG CACGC CGC GCGTG TTTGCGTTCCACAGA TERM 769 694010 - 693984 - R 93 -11.4 -4.56978 | overlap 693985 CGCGCAAACAACAAA CGCGGGCCCGGC AAC GCGGGACCCGCC TGCATCGCCAGCAGC TERM 770 694009 - 693985 - R 87 -14.9 -3.33464 | overlap 693984 GCGCAAACAACAAAC GCGGGCCCGGC AAC GCGGGACCCGC CTGCATCGCCAGCAG Bphy_0617 694491 - 694054 - | NusB antitermination factor Bphy_0618 695006 - 694488 - | 6,7-dimethyl-8-ribityllumazine synthase TERM 771 694592 - 694608 + g 86 -10.8 -4.21194 | TTTCGACGGCAGTGC GGGCCG CGTCA CGGCCC TTTTCGGTCATGCGG TERM 772 694625 - 694641 + g 70 -5.8 -4.21194 | overlap 694617 TTTCGGTCATGCGGG CGACGG CCTGC TCGTCG TTTTCCGTGGTCAGC TERM 773 694761 - 694805 + g 84 -8.3 -4.56597 | opp_overlap 694741 694760, overlap 694763 CTCGCCGCGAATGAC CGCGCCGAGCGCGATCAGCGC GTC GAACTGGCCGCTTTCGGCGAG TTTTTGCAGCGCGAG Bphy_0619 696232 - 695096 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 774 696123 - 696157 + g 71 -9.3 -3.71848 | gap 1, overlap 696124 GGCGTGATGAATTCC G-CTGCGATGACGAGG TCGC CCTCGTTCTCGCGGTC TTCTTCGTCGACAAG TERM 775 696124 - 696155 + g 78 -13 -3.44284 | overlap 696123 GCGTGATGAATTCCG CTGCGATGACGAGG TCGC CCTCGTTCTCGCGG TCTTCTTCGTCGACA Bphy_0620 696961 - 696347 - | riboflavin synthase, alpha subunit Bphy_0621 698107 - 696986 - | riboflavin biosynthesis protein RibD Bphy_0622 699427 - 698147 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 776 698373 - 698426 + g 79 -14.8 -3.01712 | gap 3, opp_overlap 698368 698382, overlap 698379 698382 AGGCCGAACATGCCG CC-GACGGAATCCGC-CGTGAA-CGGA ATC TTCGCTTCGCGCGCGGCTTCCGTCAGG TCTTGCACGAGACGG TERM 777 699319 - 699299 - G 72 -8.2 -4.13767 | opp_overlap 699302, overlap 699302 CTCTGCATCCCAAAA GTACGCGC CCTGT GCGCGTTC GATGAAACGCGGCGT TERM 778 699344 - 699327 - G 71 -9.1 -3.72576 | gap 1 GCGCGTTCGATGAAA CG-CGGCG TGC CGCCGACG GAGCGGAAGGCGCGC Bphy_0623 700288 - 699638 - | hypothetical protein TERM 779 700416 - 700465 + H 87 -15 -3.36803 | gap 1, opp_overlap 700402 TCGGGGGCCGTATCC GCAGCGCTGCACGGACCGCCGGT CCAGC ATCGCCGTTCCTTGC-GCGCTGC TTCTCACTGGAATTC TERM 780 700503 - 700556 + G 73 -13.8 -2.80354 | gap 2, overlap 700505 700531 CACGACGTCAGATCC CGGCCCGACGCGCGGCTGATTCTGCT GCTC GGCGCGCTC-GCCGCGTG-CGGGCCG ATTTCGATCGATATG TERM 781 700531 - 700557 + G 84 -13.6 -3.6806 | overlap 700503 GGCTGATTCTGCTGC TCGGCGCGCTCG CCG CGTGCGGGCCGA TTTCGATCGATATGT Bphy_0624 700482 - 701690 + | Bcr/CflA subfamily drug resistance transporter Bphy_0625 703766 - 701847 - | glucokinase TERM 782 702881 - 702852 - G 80 -15.8 -2.87344 | CACGTTCTTCAGATA CGCTTCGAAGCG GCCTTT CGCCTCGAAGCG TTGACGGAACGATGA Bphy_0626 704451 - 703744 - | 6-phosphogluconolactonase Bphy_0627 706056 - 704599 - | glucose-6-phosphate 1-dehydrogenase TERM 783 705758 - 705723 - G 88 -15.4 -3.37198 | gap 1, opp_overlap 705750, overlap 705721 705724 TCGCCAGATAGAACA CGCGCG-TGCCGGGCAG GTC CCGCACGGCATCGCGCA ATTGCACGAAGTCTT TERM 784 705757 - 705724 - G 81 -16.7 -2.61997 | gap 1, opp_overlap 705750, overlap 705723 705721 CGCCAGATAGAACAC GCGCG-TGCCGGGCAG GTC CCGCACGGCATCGCGC AATTGCACGAAGTCT TERM 785 707425 - 707413 - g 75 -9.1 -3.97139 | GAACGCGAACAAGAA GTCCG GCT CGGAC TACATCTGCGCGGCC Bphy_0628 706586 - 707833 + | extracellular solute-binding protein TERM 786 708052 - 708015 - g 70 -4.8 -4.35926 | gap 2, overlap 708016 708017 708019 AGCGGAAACGCAAAA GGCA-CGGCG-TCCGCAG CACG CCGCGTATCGCCGATGGC GGCAATGGCCGACCG Bphy_0629 707985 - 708926 + | binding-protein-dependent transport systems inner membrane component Bphy_0630 708916 - 709773 + | binding-protein-dependent transport systems inner membrane component TERM 787 710590 - 710614 + G 84 -15.1 -3.33696 | TCTGTTCGTCGCTGG GTTCATCGGTG CAC CGCCGATGAAC TTCATTCAGGGGAAG Bphy_0631 709892 - 711007 + | ABC transporter related TERM 788 711035 - 711078 + T 86 -16.2 -2.79671 | gap 1, opp_overlap 711043, overlap 711043 GCTGTTGGGTTGGTT TCGAGAAAGCCCCGAG-GGAT AAG ATTCGCTCGGGGCTTTCTGGG CTTTGGGCTTCAGGT TERM 789 711070 - 711043 - T 87 -12.7 -3.85698 | opp_overlap 711035 711043 GTTGGTTTCGAGAAA GCCCCGAGGGA TAAGAT TCGCTCGGGGC TTTCTGGGCTTTGGG TERM 790 711043 - 711070 + T 91 -12.8 -3.95219 | gap 1, opp_overlap 711043, overlap 711035 GTTGGTTTCGAGAAA GCCCCGAG-GGAT AAG ATTCGCTCGGGGC TTTCTGGGCTTTGGG Bphy_0632 711819 - 711199 - | hypothetical protein Bphy_0633 712635 - 711835 - | Smr protein/MutS2 TERM 791 712684 - 712659 - R 100 -14.7 -5.10163 | gap 1 AAGCTGAAAACAAAA GGGCCGCCGGCA TCA CGCCG-CGGCCC CTACGAACATCGAAC TERM 792 712712 - 712734 + r 71 -11.2 -3.22475 | opp_overlap 712711 712710, overlap 712710 AACATCTCAACAAGC GCGGCAAGCG TGC TGCATGCCGC TATTCTACCGATCCG Bphy_0634 713814 - 712813 - | thioredoxin reductase TERM 793 713420 - 713386 - G 93 -4.8 -5.40072 | GTTCTTGTAAAAAAA GCCGTCGCAGGTCG CGCACGC CGACACGCCGCGGC CCATGAACAGTTCTT TERM 794 713512 - 713530 + g 86 -10.3 -4.2558 | overlap 713505 GTACTCGCCCGAATC GCCGATC AGGCG GATCGGC TTTTCGTCCAGCCTG Bphy_0635 714314 - 716581 + | cell division FtsK/SpoIIIE Bphy_0636 716618 - 717313 + | outer membrane lipoprotein carrier protein LolA TERM 795 717328 - 717358 + T 76 -13.3 -2.80816 | opp_overlap 717316, overlap 717332 AATGCCTGTCACGCC TGAAGGCCGGGCG ACGGA TGCGCGGCCTTCA TATCGTCGATAAACG Bphy_0637 718235 - 717321 - | LysR family transcriptional regulator Bphy_0638 718397 - 719389 + | agmatinase TERM 796 719453 - 719476 + F 100 -11 -5.38054 | opp_overlap 719442 719453 GAATCGTTTGGACAA CGCCCGCAAT GTCC GTTGTGGGCG TTTTTATTTCTCGCC TERM 797 720957 - 720941 - g 76 -5.8 -4.58663 | gap 1 ATCAGTCTGCAAAAA GGC-GCG TTGA CGCAGCC GCAAATCGACACACT Bphy_0639 719663 - 721291 + | TPR repeat-containing protein Bphy_0640 722627 - 721311 - | hydroxymethylpyrimidine transporter CytX TERM 798 722149 - 722127 - G 70 -2.6 -4.63527 | gap 1, overlap 722139 722142 CCACGAGCGCAAAAA GCGCCGCAC GAACGA GAGCGG-GC CGCTGATCGCGAGCA TERM 799 722487 - 722462 - G 71 -10.4 -3.64703 | gap 1, overlap 722463 722478 722479 CGTGCGGCAGCGAAA GGCCGGGCACG AGCAA CGCGCCCG-CC TGCGCGACCAGCAGG TERM 800 722559 - 722533 - G 80 -12.2 -3.75193 | opp_overlap 722525, overlap 722525 AACCATAGAGCGAAA GCGTCGCCCGTT TTG AACGCGCGGCGC CCATCCGGCACCGGC TERM 801 722845 - 722884 + H 72 -8.5 -3.85698 | gap 1 CCGTTCCGGGGCAGG CCGTCGCG-CGCAAGGCG GTGCA CGCTATGCATCGTGACGG TTTATACCCGAAAAG TERM 802 724189 - 724162 - g 72 -13.4 -3.05844 | overlap 724172 724173 GGCTCGAGGGCAAGA TCGGCGAGAAGC TCGC GCGCCTCGCCGA CCTGGATGCGCAATG Bphy_0641 722871 - 724232 + | ATPase central domain-containing protein TERM 803 724252 - 724228 - f 75 -5.6 -4.68705 | overlap 724230 AGAACGGCAAGAAAA GCTGACGCGC TCGTC GCGCCTCACC CGACAATGCCGCCGG Bphy_0642 724326 - 725624 + | seryl-tRNA synthetase TERM 804 725869 - 725910 + F 100 -23.3 -3.64912 | opp_overlap 725875 725881, overlap 725871 725875 725881 ACCCTTTCCGCCAGA TGCAAACGAAAACAGGCCC TTCG GGGCCTGTTTTCGTTTGTG TTGTCTATATCCATG TERM 805 725871 - 725908 + F 100 -25.9 -3.39896 | opp_overlap 725875 725881, overlap 725869 725875 725881 CCTTTCCGCCAGATG CAAACGAAAACAGGCCC TTCG GGGCCTGTTTTCGTTTG TGTTGTCTATATCCA TERM 806 725904 - 725875 - f 100 -20.9 -3.70902 | opp_overlap 725871 725869 725875 725881, overlap 725881 TCCGCCAGATGCAAA CGAAAACAGGCCC TTCG GGGCCTGTTTTCG TTTGTGTTGTCTATA TERM 807 725875 - 725904 + F 100 -20.9 -4.3277 | opp_overlap 725875 725881, overlap 725871 725869 725881 TCCGCCAGATGCAAA CGAAAACAGGCCC TTCG GGGCCTGTTTTCG TTTGTGTTGTCTATA TERM 808 725881 - 725898 + F 100 -12.7 -4.67563 | opp_overlap 725875 725881, overlap 725875 725871 725869 AGATGCAAACGAAAA CAGGCCC TTCG GGGCCTG TTTTCGTTTGTGTTG TERM 809 725898 - 725881 - f 100 -12.7 -4.57516 | opp_overlap 725881 725875 725871 725869, overlap 725875 AGATGCAAACGAAAA CAGGCCC TTCG GGGCCTG TTTTCGTTTGTGTTG Bphy_0643 726158 - 726388 + | hypothetical protein TERM 810 726725 - 726735 + F 89 -4 -5.60993 | ATGCGCGGTCACTAC TGAA AGG TTCA TTTTTTTCTGGCGCA TERM 811 726855 - 726825 - g 70 -11.1 -3.32844 | opp_overlap 726828 TGCGTCATGGCAGAA GCTCCGCGC-GCCCG GTT CGGGCAGC-CGGCGC CCTGGTCAGTTGCTA TERM 812 727982 - 728001 + G 91 -11.4 -4.56597 | GAGCGAGTGCGGATC GCGCGATC GCGT GGTCGCGC TTTTTGCGCAACCCG Bphy_0644 726816 - 728279 + | PAS/PAC sensor signal transduction histidine kinase TERM 813 728259 - 728294 + F 74 -13.3 -2.65264 | gap 1, opp_overlap 728247 GCAGGCAGCGCGTGC GCTGCGCAGGCGGCGT CATGA AC-CCGTCTGCGCCGC TCGTCTACGTCGTCG Bphy_0645 728276 - 728998 + | two component LuxR family transcriptional regulator TERM 814 729104 - 729076 - g 71 -3.9 -4.55697 | gap 1, overlap 729077 729080 ATGGGCACAAACAAA CCATTCGTCGTC GTGGTG GACGACG-ATGC GTCGGTGGGCAGGGC Bphy_0646 729061 - 729447 + | response regulator receiver protein Bphy_0647 729678 - 730955 + | RND family efflux transporter MFP subunit Bphy_0648 731005 - 734274 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Bphy_0649 734276 - 735766 + | RND efflux system outer membrane lipoprotein Bphy_0650 735763 - 737112 + | PqiA family integral membrane protein Bphy_0651 737109 - 738713 + | hypothetical protein Bphy_0652 738710 - 739300 + | hypothetical protein Bphy_0653 739727 - 740512 + | methionine aminopeptidase, type I TERM 815 740585 - 740602 + F 86 -9.1 -4.60041 | TGCGGCGCCCCTTTC CGGCACG TGCG TGTGCCG TTTTTGCGCGTGCCT TERM 816 741086 - 741066 - g 75 -14 -3.02043 | AACTGCTCGTCAACA CGGCGAGC GACTG GCTCGCCG CAGCGGGCGCCACCG Bphy_0654 740735 - 741277 + | GCN5-related N-acetyltransferase TERM 817 741306 - 741323 + F 75 -8.4 -4.08216 | TCGTTGCGGCGTCTC GCGGCT CCTGCT AGCCGC TTTTGGACACGCTAC TERM 818 741352 - 741390 + F 78 -3.7 -4.9792 | gap 1 ACTTTTCCCGCTCTT TGCCGATTGCTCCGCCCA GGAC TCGGCGC-GCACGCGGCA TTTTTCTGTCGCGTG TERM 819 741855 - 741836 - g 91 -16.4 -3.62522 | overlap 741824 GAAGCGGGCGAAGAA GCGCCCGG CAAG CCGGGCGC CGTGGCGCCGAAGCC Bphy_0655 741479 - 742327 + | septum site-determining protein MinC TERM 820 742990 - 742945 - g 77 -13.3 -3.40371 | gap 1, opp_overlap 742942 GATCCCATCAAGGAA CACCTGCTGATCACGCGCTACA ACC CGAAGCGCGTGAGC-GAAGGTG AGATGCTGTCGCTGA Bphy_0656 742417 - 743232 + | septum site-determining protein MinD Bphy_0657 743248 - 743502 + | cell division topological specificity factor MinE Bphy_0658 743764 - 744075 + | hypothetical protein Bphy_0659 744198 - 744311 + | hypothetical protein TERM 821 744325 - 744352 + T 100 -14.8 -5.44119 | GACGATTGTGGGAGG TCGGGCGCGTGC AGCC GAGCGCGCCCGA TTTTTTTGCAATCGG Bphy_0660 745838 - 744381 - | chloride channel core TERM 822 745201 - 745229 + g 84 -13.2 -3.73068 | gap 1 GTGATCAGCACACCG CTCGCGCGC-GCT TCGA AGCTGCGCGTGAG TTCTTCGATTGCGAA TERM 823 745587 - 745558 - G 73 -5.5 -4.41348 | overlap 745581 GCGCCGCGAAAGAAA CGCCGCGTGAGCC AGAC GGACAATGCGGCG ACGCCGGGCGTCAAC Bphy_0661 746046 - 747056 + | lipopolysaccharide heptosyltransferase I TERM 824 747123 - 747091 - T 84 -2.6 -5.37593 | overlap 747096 747098 TTTGAAAGGAAAAAA GAAAAGAGGCGTAC GCGCA GTTCGCCCAATTTC GGACGCCGTCGCGAG TERM 825 747145 - 747096 - T 85 -3.4 -5.47846 | overlap 747091 747098 AAGGAAAAAAGAAAA GAGGCGT-ACGCGCAGTTCGCCCA ATTT CGGACGC-CGTCGCGAGACGCCTC TGAAAAGCCCGCGCC TERM 826 747174 - 747152 - T 78 -9.8 -4.08394 | AGACGCCTCTGAAAA GCCCGCGC CTGAAGC GCGCGGAC CGAGAGGAAACCTGC Bphy_0662 748056 - 747877 - | hypothetical protein TERM 827 748275 - 748223 - R 100 -27.1 -2.56596 | gap 1, overlap 748227 CTTTCGACTAACTCA GCAAGCG-AAGCGGCCCCGGCGTG GTGCAT CGCGCCGGGGCCGCTTGCGCTGGC TCGTGAGCCGGGATT TERM 828 748271 - 748227 - R 100 -25.1 -3.22884 | gap 1, overlap 748223 CGACTAACTCAGCAA GCG-AAGCGGCCCCGGCGTG GTGCAT CGCGCCGGGGCCGCTTGCGC TGGCTCGTGAGCCGG Bphy_0663 749596 - 748289 - | general substrate transporter Bphy_0664 750631 - 750119 - | TonB protein Bphy_0665 752151 - 750937 - | oxygen-independent coproporphyrinogen III oxidase TERM 829 751522 - 751541 + g 74 -10 -3.7108 | gap 1 GAGCGACAGATGCGG CGGCGC-GT ACG ACAGCGCCG TTTCGATATCCGCCT Bphy_0666 752771 - 752148 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 830 752195 - 752211 + g 71 -10.1 -3.61398 | GCTGCAGCGCAAGTG CGCGATG ACT CGTCGCG TTCTTCACGGCAGGC Bphy_0667 753504 - 752764 - | ribonuclease PH TERM 831 753370 - 753343 - G 73 -9.1 -3.85698 | gap 1 GCGGTCGCGCAGAAA GGCGGGCA-CGC TCTCG GCGATGCTCGCC GTGCAGATCACCTTG Bphy_0668 753770 - 754729 + | hypothetical protein Bphy_0669 754746 - 755432 + | guanylate kinase Bphy_0670 755495 - 755698 + | DNA-directed RNA polymerase, omega subunit TERM 832 756419 - 756403 - g 76 -9.3 -4.07568 | overlap 756404 GGTGCCGCCCGAAAA GCGCCGC CGC GTGGCGC GCGAAACGCTGGACA TERM 833 756555 - 756542 - g 74 -5.2 -4.58395 | GCGACGCTCGAAAAA GCCG TGAAGG CGGC GCGCGGCAACCGTCG Bphy_0671 755774 - 758158 + | (p)ppGpp synthetase I, SpoT/RelA TERM 834 758373 - 758389 + G 72 -8.7 -4.1585 | overlap 758386 GGGAATGATCGCGGA CGTCCGT GGG ATGGACG TTTTACGCCTTCTAC Bphy_0672 758244 - 758732 + | hypothetical protein TERM 835 758783 - 758804 + F 89 -15.9 -3.18264 | opp_overlap 758783 GCTAGAAAAGACAAA GGGCCTTCC GGTT GGAAGGCCC TTCATGAGTGGCGCG TERM 836 758804 - 758783 - f 100 -15.9 -4.51238 | opp_overlap 758783 GCTAGAAAAGACAAA GGGCCTTCC GGTT GGAAGGCCC TTCATGAGTGGCGCG TERM 837 758971 - 758950 - f 100 -15.9 -4.05788 | CCCGGTGAAACGAAA GGGCCTTCC TGGA GGAAGGCCC TCGAAAAAATGGCGC Bphy_0673 759177 - 759749 + | transcription elongation factor GreB TERM 838 759836 - 759805 - T 100 -19.6 -3.86524 | opp_overlap 759812, overlap 759806 759812 ACATGTCGGCACAAA CGAAAAAGGCGCCG CAAA CGGCGCCTTTTTCA TGCTGCGAGTACTGC TERM 839 759835 - 759806 - T 100 -20.9 -2.91593 | opp_overlap 759812, overlap 759805 759812 CATGTCGGCACAAAC GAAAAAGGCGCCG CAAA CGGCGCCTTTTTC ATGCTGCGAGTACTG TERM 840 759829 - 759812 - T 100 -14.1 -5.04601 | opp_overlap 759812, overlap 759806 759805 GGCACAAACGAAAAA GGCGCCG CAAA CGGCGCC TTTTTCATGCTGCGA TERM 841 759812 - 759829 + T 100 -14.1 -4.77036 | opp_overlap 759812 759806 759805 GGCACAAACGAAAAA GGCGCCG CAAA CGGCGCC TTTTTCATGCTGCGA Bphy_0674 761003 - 759858 - | porin TERM 842 760433 - 760449 + g 79 -11.5 -3.90744 | AGCTGTACGACGCGC CCGCGCT ATA GGCGCGG TTGTTTGCGAAGCCG TERM 843 761420 - 761439 + r 76 -5 -4.8622 | overlap 761421 ACGCTATACTTGAAT CTCTGCTT TTCG AAGCAGAC TTTTTCGTTGACGAA TERM 844 761477 - 761499 + r 100 -11.3 -5.86061 | TCCAAACCTTTGTCG GCGCGACTT CGCAA GAGTCGCGC TTTTTTTTCGTCCGC Bphy_0675 761769 - 761527 - | hypothetical protein Bphy_0676 762175 - 762378 + | cold-shock DNA-binding domain-containing protein TERM 845 762408 - 762424 + F 100 -11.5 -5.4833 | opp_overlap 762408 GGCTCCCAGGATAAA CCCTCGC ATT GCGGGGG TTTTTTATTGGCTGC TERM 846 762424 - 762408 - f 78 -9.3 -3.96148 | opp_overlap 762408 GGCTCCCAGGATAAA CCCTCGC ATT GCGGGGG TTTTTTATTGGCTGC TERM 847 763631 - 763654 + G 75 -10.3 -3.86202 | gap 1 GCGTTCGAGGAGCGG GACGCG-GCG GAAGG CGCGCGCGTC TTTCATATCGTCGAC Bphy_0677 762698 - 763876 + | DNA polymerase III, epsilon subunit Bphy_0678 764496 - 763873 - | chorismate mutase Bphy_0679 764948 - 764799 - | hypothetical protein Bphy_0680 765211 - 765549 + | hypothetical protein Bphy_0682 767175 - 766231 - | LysR family transcriptional regulator TERM 848 768063 - 768033 - g 70 -7.5 -3.94877 | gap 1 AGTGCTGAACAACAA GCTGTTTGCC-GCG TTCG CGCAGGCAATCGGC GCGCCGCATCTGACG Bphy_0683 767269 - 768519 + | Formyl-CoA transferase Bphy_0684 768512 - 769651 + | acyl-CoA dehydrogenase domain-containing protein TERM 849 769706 - 769748 + T 89 -15.8 -3.44051 | opp_overlap 769717, overlap 769707 769717 ATCGATCCGTGAGCA GAAAACAAAAAGCCCAGTCG CGA TGACTGGGCTTTTTGTTTGA TTCTGCTGGTGCCGG TERM 850 769707 - 769747 + T 95 -19.3 -2.66216 | opp_overlap 769717, overlap 769706 769717 TCGATCCGTGAGCAG AAAACAAAAAGCCCAGTCG CGA TGACTGGGCTTTTTGTTTG ATTCTGCTGGTGCCG TERM 851 769717 - 769737 + T 100 -13.3 -5.39681 | opp_overlap 769717, overlap 769707 769706 AGCAGAAAACAAAAA GCCCAGTCG CGA TGACTGGGC TTTTTGTTTGATTCT TERM 852 769737 - 769717 - T 100 -12.6 -5.56263 | opp_overlap 769707 769706 769717 AGCAGAAAACAAAAA GCCCAGTC GCGAT GACTGGGC TTTTTGTTTGATTCT TERM 853 769926 - 769957 + T 78 -3.7 -5.00616 | gap 1, overlap 769929 CTCAACTTTTCTTTT CG-AGATGATAGCG GGTCA CGCGATCAACTTCG TTTTTTGAGCCGAGG Bphy_0685 770928 - 769912 - | inositol phosphatase/fructose-16-bisphosphatase TERM 854 770704 - 770722 + g 73 -9.6 -3.82191 | TTCGAGCAGGATTTC GTTCGACA GGA TGTCGAGC TTCTTCTGCACTTCG TERM 855 771202 - 771185 - R 100 -12.7 -5.95539 | opp_overlap 771197 TCGCAAATAAAAAAA GCCGGCA CATG TGCCGGC TTCCGACTTCGCTGG TERM 856 771240 - 771223 - R 70 -4 -4.56775 | ACTTCGCTGGAAAAA CGCAGG ATCAGG CCAGCG CCTTCTCGACGATTT Bphy_0686 774013 - 771230 - | aminopeptidase N TERM 857 771496 - 771506 + g 70 -2.4 -4.66833 | AGATCAGCGAGCGCG CGCG ATT CGGG TTTTTCAGATTGAAC Bphy_0687 774129 - 774830 + | putative transmembrane lipoprotein TERM 858 774890 - 774863 - T 100 -19.2 -5.44119 | opp_overlap 774863 774883 TCGAGGGCAAAAAAA CGGCCACATCGC GTGA GCGATGCGGCCG TTGCTATTGGCTGCC TERM 859 774863 - 774890 + T 90 -17 -3.38072 | opp_overlap 774863, overlap 774883 TCGAGGGCAAAAAAA CGGCCACATCGC GTGA GCGATGCGGCCG TTGCTATTGGCTGCC Bphy_0688 775509 - 774937 - | hypothetical protein TERM 860 775138 - 775148 + g 75 -6.8 -4.39002 | GGCGAGGGCAACAGT CGCA ATT TGCG TTTTGTCGCCCATTT TERM 861 775924 - 775890 - H 76 -13.5 -2.78384 | gap 1 GTCGGGCCGATTAGA CGCG-CCGTGGCCGTG CGGG CTCGGCCACGCTCGCG CCCCGGGTGGCGAGA Bphy_0689 776264 - 776968 + | hypothetical protein TERM 862 777301 - 777317 + G 80 -5.1 -4.83615 | GCGTCGTGAAGAGCG CGCATTG GGG CAATCCG TTTTTCTGGGGCGTC Bphy_0690 776952 - 777746 + | phospholipid/glycerol acyltransferase TERM 863 777824 - 777848 + G 72 -12.9 -3.05463 | opp_overlap 777786 ACGACGCGCCGCTCT TCGATACCGAC GGC GTCGGTCTCGA TTCGATCGACGCACT Bphy_0691 777727 - 778026 + | putative acyl-carrier protein Bphy_0692 778023 - 778280 + | phosphopantetheine-binding TERM 864 778814 - 778828 + G 70 -2.7 -4.60797 | TGGTGCGTGTTCTTT CTCGC GAATG GCGTG TTTTCTCTCTACACC Bphy_0693 778280 - 778984 + | hypothetical protein TERM 865 779683 - 779699 + G 91 -9.3 -4.72007 | overlap 779664 GGCTTCGCGGCGCTC GCGCCCG TGC CGCGCGC TTTCTTTTCGTCGGG TERM 866 779848 - 779826 - g 77 -12.7 -3.32844 | overlap 779831 GTGGCGACGTCAGAA CGAGACGCC GGCGT GGCGTCCCG TCAGCGGCGTCGACG Bphy_0694 778981 - 780669 + | AMP-dependent synthetase and ligase TERM 867 781669 - 781640 - g 100 -22.1 -3.04144 | CGCGCATCTCGAACA GGCCGCGGCGGGC GAGC GCACGCCGCGGCC CGGCTGGCGCTCCGC Bphy_0695 780666 - 782447 + | glycosyl transferase family protein TERM 868 783872 - 783930 + G 76 -13.8 -3.14132 | gap 3, opp_overlap 783871 783872 783875 TGCGCCTCAACGAAG CGACGCCCGTGCC-CG-CGCCGTTGCGCG CATT CGCG-GACGGCGTCGCGGCGCTGTCGCCG TTCGTCGACGAAGAC Bphy_0696 782434 - 784029 + | histidine ammonia-lyase Bphy_0697 784022 - 784453 + | thioesterase superfamily protein Bphy_0698 784441 - 785109 + | putative signal peptide protein Bphy_0699 785106 - 787526 + | RND superfamily drug exporter TERM 869 787961 - 787926 - g 71 -9.7 -3.7108 | gap 2, overlap 787912 787927 ACCGGCAGATGGAAA TCGGCACGGCCGCGCCG TTCG CGGC-C-GCCGCGCTGA ATGTGCAGGGGCCGG Bphy_0700 787523 - 788704 + | Beta-ketoacyl synthase TERM 870 789058 - 789030 - g 70 -13.8 -2.61383 | gap 1, overlap 789029 ACGCGCAGCTACAAG GCGCACGCGAGCG CATT CGCGCGCG-GCGC GCATCTGACCGTCAA Bphy_0701 788739 - 789221 + | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ Bphy_0702 789218 - 789943 + | 3-oxoacyl-(acyl-carrier-protein) reductase Bphy_0703 789943 - 791169 + | Beta-ketoacyl synthase TERM 871 791588 - 791563 - g 70 -5.3 -4.36914 | gap 1, overlap 791545 791565 GCGGTGTCGAGAAAA CGCC-GCCGTAC ACG GTGCCGCAGGCG ATGAGCAGCACCGCC Bphy_0704 791166 - 792392 + | Beta-ketoacyl synthase Bphy_0705 792436 - 792864 + | putative signal peptide protein Bphy_0706 792892 - 793323 + | putative excinuclease, ATPase subunit TERM 872 793367 - 793339 - T 88 -13.8 -3.71649 | gap 1, opp_overlap 793337 CGCGGAAAGCCCAAA GGCGGC-GGCGCG TATG CGCGCATGCCGCC CGTCGTGTCAGTCTG Bphy_0707 794127 - 793375 - | methyltransferase type 11 TERM 873 794344 - 794385 + G 72 -8.5 -4.19817 | overlap 794353 CTGCTGCGCAAGGCG GGACGGTCGGTGCTGGTGC TCGA GCGCCAGCACTTTCCGCGC TTTTCGATCGGTGAG TERM 874 794353 - 794376 + G 87 -14.6 -3.60818 | overlap 794344 AAGGCGGGACGGTCG GTGCTGGTGC TCGA GCGCCAGCAC TTTCCGCGCTTTTCG Bphy_0708 794248 - 795498 + | monooxygenase FAD-binding TERM 875 795520 - 795533 + T 84 -3.7 -5.28983 | overlap 795519 795506 GGGTGTTTTTGTCTG CGACG CAAT CGCCG TTTTTGTCTTTTCGC Bphy_0709 796969 - 795644 - | guanine deaminase TERM 876 796648 - 796622 - G 78 -4.3 -4.72272 | gap 1, opp_overlap 796622 796643 CTCGTCGATGAAAAA GCGCGCCGTGTC CTCT GCGACGGCG-GC TTCGCTGAAACCGCG Bphy_0710 798039 - 796999 - | adenosine deaminase Bphy_0711 799154 - 798144 - | xanthine dehydrogenase accessory protein XdhC TERM 877 799211 - 799238 + r 74 -13.4 -2.6252 | gap 1, overlap 799189 799206 GCCGGTTGATCGTGT GG-GCGGCGCGGT CGT GTCGCGCCGCACC TGGGTTGTGCTATGC Bphy_0712 801704 - 799248 - | xanthine dehydrogenase, molybdopterin binding subunit TERM 878 799494 - 799482 - G 74 -10.5 -3.73936 | opp_overlap 799481 799485 AAACGGCAGCAATAA CGGCG GCT CGCCG ACGGCTTTCGAGCGG TERM 879 799485 - 799527 + g 78 -7.5 -4.42238 | opp_overlap 799482, overlap 799481 CGGCAGCAATAACGG CGGCTCGCCGACGGCTTTC GAGCG GAACACCGTCGGCTCGGCG TTTTCATTGCGATAC TERM 880 800765 - 800730 - G 71 -7.5 -4.07885 | CAGGTCCGCCGAAAA CCCCGCGCGCAGCG-CG ATCT CGACAC-GCGCGCCGAG AATGCGGCCGGCGTC TERM 881 800772 - 800792 + g 71 -12.5 -3.23395 | opp_overlap 800769 800768 CGCGCCGAGAATGCG GCCGGCGTC GTC GAAGCCGGC TTCGTACTCGTAGAT Bphy_0713 803242 - 801704 - | xanthine dehydrogenase, small subunit Bphy_0714 804158 - 803652 - | disulphide bond formation protein DsbB TERM 882 803738 - 803702 - G 87 -7.9 -4.84359 | TCAGCGCGACAAAAA TCACCGCGAAGCCGATC AGT GACCAGCCCGGCAGCGA AATGCCGAGAATCGG Bphy_0715 805652 - 804264 - | amidase TERM 883 806681 - 806699 + G 70 -11.6 -3.33009 | opp_overlap 806675 806673, overlap 806695 806696 CATCGAACACCTGAT CGCGCCGC TGC GCGACGCG TTCTCCGCGATTTTC TERM 884 806695 - 806709 + G 70 -2.7 -4.71426 | opp_overlap 806675 806673, overlap 806681 806696 TCGCGCCGCTGCGCG ACGCG TTCTC CGCGA TTTTCTTCGTGACGA Bphy_0716 805878 - 807635 + | sodium/hydrogen exchanger TERM 885 807831 - 807815 - g 84 -15.1 -3.34947 | opp_overlap 807810 GAACAATTCCGATAA CGCCGGG GCT CCCGGCG ATCCATCTCCTTCCA TERM 886 808246 - 808302 + G 71 -13.6 -2.72511 | opp_overlap 808204 808263, overlap 808245 AGCCGGATGGCACGC TCGGCGTAGCGGCGAAAGCC-GGTGGCG CTC CGCCCCCCGGC-TTCGGCTCGGCGCCGG ATTTCGGCGCATCGA Bphy_0717 807792 - 809231 + | peptidase C26 TERM 887 809246 - 809289 + F 88 -15.3 -3.54543 | overlap 809247 ATCTCGCTAACTTCT CGCCGAACGCGAGCGGG GCCGGCAACG CCCGCTCGCGTTCTGCA TTTCAGCGCATCCGT TERM 888 809247 - 809288 + F 100 -18.8 -2.72511 | overlap 809246 TCTCGCTAACTTCTC GCCGAACGCGAGCGGG GCCGGCAACG CCCGCTCGCGTTCTGC ATTTCAGCGCATCCG TERM 889 809825 - 809837 + G 81 -3.3 -5.00616 | GTACAACGGCGGTTA TGGCG CGT CGCTG TTTTTTCACGCGCCG Bphy_0718 809508 - 810251 + | putative exported lipoprotein TERM 890 810328 - 810294 - T 100 -18.6 -3.91716 | opp_overlap 810296, overlap 810296 CGACGGCGCAAAGAA TAGGGCTGAGTCCGCG ATT CGTGGACTCAGCCCTT TGTGCCTTCAGGCAG TERM 891 810326 - 810296 - T 100 -21.2 -3.54755 | opp_overlap 810296, overlap 810294 ACGGCGCAAAGAATA GGGCTGAGTCCGCG ATT CGTGGACTCAGCCC TTTGTGCCTTCAGGC TERM 892 810296 - 810326 + T 100 -23.4 -3.97368 | opp_overlap 810296 810294 ACGGCGCAAAGAATA GGGCTGAGTCCGCG ATT CGTGGACTCAGCCC TTTGTGCCTTCAGGC Bphy_0719 811460 - 810381 - | hypothetical protein Bphy_0720 812185 - 811619 - | GCN5-related N-acetyltransferase TERM 893 811995 - 811974 - G 73 -13.7 -2.83715 | gap 1 GCGATCAGCACGATA CGGCGCTCGG CCC CCG-GCGCCG ACAACCGCGCGCGCC Bphy_0721 812590 - 813891 + | general substrate transporter TERM 894 813957 - 813938 - T 84 -15 -2.96274 | opp_overlap 813938, overlap 813933 CGCTGTAGAACCAGA CCCCCGCA CGTG TGCGGGGG TTTTCATTTCATCGG TERM 895 813938 - 813957 + T 100 -15 -4.58773 | opp_overlap 813938 813933 CGCTGTAGAACCAGA CCCCCGCA CGTG TGCGGGGG TTTTCATTTCATCGG Bphy_0722 815849 - 814002 - | TPR repeat-containing protein TERM 896 814461 - 814502 + g 78 -15.7 -2.72344 | gap 1 CTTGCGCTTCGCGTG CCCGCCGAG-CGAGCCGCGC CAC GTGCGGCGGGACGCGGCGGG TGCTTGCAGATAAGG TERM 897 814807 - 814842 + g 100 -19.6 -4.07687 | GGCTCGCCGTTCCAG CGCGGCAGCGCCGTCG CGTC CGGCGCCGCGGCCGCG TTTTCCAGCCGCCAT TERM 898 814990 - 814966 - G 91 -17.1 -3.53343 | overlap 814967 AATGCCTGGTCGAAA GCGCGCACGGC AGC GTCGTGCGCGC CGAGCGCGTGATGCG TERM 899 814998 - 814967 - G 75 -15.1 -2.71791 | gap 1, overlap 814966 ATGCCTGGTCGAAAG CGCGCACGGCAGCG TCGTG CGC-GCCGAGCGCG TGATGCGCGGCGCCG TERM 900 815075 - 815054 - G 70 -10.9 -3.39449 | gap 1, opp_overlap 815056, overlap 815050 815069 CCGGATCAAGACCAA CGGC-GCGTT CGA AACGCGGCCG CGCTTCTGCATGACG TERM 901 815267 - 815227 - G 87 -15.3 -3.57144 | opp_overlap 815221 TTGGCGAGGTTGAAA CGCGCGGCGACGAAGCGCG GCT CAATCTTCAGCGCCGCGCG GAAATGGGCGCCTGC Bphy_0723 815960 - 816340 + | ArsR family transcriptional regulator Bphy_0724 816337 - 817458 + | cation diffusion facilitator family transporter Bphy_0725 817568 - 819283 + | monooxygenase FAD-binding TERM 902 819329 - 819302 - T 100 -17.8 -6.22802 | opp_overlap 819308 GGCCATAAAAAAAAA GCGTCCGCATCG TTGC CGATGCGAACGC CAAGGTGCTGTTGCG Bphy_0726 819612 - 819358 - | NAD-dependent formate dehydrogenase, delta subunit TERM 903 819594 - 819568 - G 70 -2.3 -4.62783 | CATCGACTCGAAAAA GTCGCCGAT-GCG GTT CGCCAT-GTCGAC CAGGTTATGTGCGTC Bphy_0727 822573 - 819634 - | formate dehydrogenase, alpha subunit TERM 904 820916 - 820967 + g 74 -10.1 -3.70149 | gap 2, opp_overlap 820896 GCGTTGCCGCCCGTC GCGT-ACAGGCGCG-CGGCTTCGCG CACC TGCTGAGCCGGCACGCCCGTCACGC TTTCCATCATCTCCG Bphy_0728 824144 - 822588 - | NADH dehydrogenase (quinone) Bphy_0729 824653 - 824141 - | NAD-dependent formate dehydrogenase, gamma subunit TERM 905 825389 - 825403 + G 74 -2.7 -4.82901 | TCGTACATCTGACGC GCCGC AAGCA GGGGC TTTTTCTGGCGAAGG Bphy_0730 824788 - 825870 + | molybdate metabolism transcriptional regulator Bphy_0731 826014 - 826280 + | hypothetical protein TERM 906 826322 - 826287 - T 88 -16.8 -3.00525 | opp_overlap 826295, overlap 826282 826290 GCTCTGTAAATGATA CGACGCACGCGGCGCC TCGC GGCATCGCGTGCGTAG CCAGGCTGAGGCGCG TERM 907 826319 - 826290 - T 87 -17.1 -2.7314 | opp_overlap 826295, overlap 826287 826282 CTGTAAATGATACGA CGCACGCGGCGCC TCGC GGCATCGCGTGCG TAGCCAGGCTGAGGC Bphy_0732 826700 - 826341 - | hypothetical protein TERM 908 826906 - 826882 - H 95 -13.6 -4.07568 | gap 1, opp_overlap 826882 CGCGGCCTGTTAAAA GGCCCGTCTCG CTCG CGAG-CGGGCC TTTCTCATTCGTGGC TERM 909 826882 - 826906 + H 95 -13.6 -4.08144 | gap 1, opp_overlap 826882 CGCGGCCTGTTAAAA GGCCCGTCTCG CTCG CGAG-CGGGCC TTTCTCATTCGTGGC TERM 910 827623 - 827650 + G 76 -9.9 -4.11692 | GCACCGTTCGACGAT GCGC-TCGCGGCC CGCA GGC-GCGAGGCGC TTTTAGGCGTGGCTC TERM 911 828034 - 828015 - g 78 -13.6 -3.28924 | GAGTTTGCCGGACAA CGTCGACG ATGG CGTCGACG GCTGGATCGTCGAGC Bphy_0733 827086 - 828213 + | glycosyl transferase group 1 Bphy_0734 828502 - 828242 - | GP29 TERM 912 828678 - 828654 - R 100 -11.4 -5.55769 | opp_overlap 828653 828654 CGGGACAACAAAAAA CCCGCAGAGC TTGAC GCTGTGCGGG CTTCTGTCCTGCGGT Bphy_0735 829900 - 829187 - | phosphoglycolate phosphatase Bphy_0736 830636 - 829938 - | ubiquinone biosynthesis O-methyltransferase TERM 913 830801 - 830818 + r 83 -14.1 -3.09834 | opp_overlap 830801 CGCAGGCATAAAAAA GCCCCGC CGAA GCGGGGC TTGGGTACTGCGGTA TERM 914 830818 - 830801 - R 100 -14.1 -5.28176 | opp_overlap 830801 CGCAGGCATAAAAAA GCCCCGC CGAA GCGGGGC TTGGGTACTGCGGTA Bphy_0737 831490 - 830843 - | OmpA/MotB domain-containing protein TERM 915 833959 - 833970 + G 74 -2.2 -4.82901 | TGAAGGAATTTTCGG CGGA CAAG TTCG TTTTTATGGCGACGG TERM 916 834464 - 834437 - g 74 -12.7 -3.21416 | overlap 834424 CATGCTGATCACCAA CACGGGCGTGC TGATCC GCACGCGCGTG TCAGAAATTCGAGAA Bphy_0738 832056 - 834635 + | DNA gyrase, A subunit TERM 917 834849 - 834832 - g 72 -12.7 -3.08211 | overlap 834829 AGCGCTGCAAAACCA GCAGCCG GCCC CGGCTGC TCCGGCCGCTGCTGC Bphy_0739 834752 - 835360 + | hypothetical protein TERM 918 835473 - 835512 + F 100 -21.6 -3.55815 | opp_overlap 835478, overlap 835478 TTTGAGCGTCAATGC GATAATGGCCGTTTGCGC TTGC GCGCAGACGGCCATTTTC TTTCAGGCGCTATTT TERM 919 835478 - 835507 + F 100 -20.1 -4.86731 | opp_overlap 835478, overlap 835473 GCGTCAATGCGATAA TGGCCGTTTGCGC TTGC GCGCAGACGGCCA TTTTCTTTCAGGCGC TERM 920 835507 - 835478 - f 93 -17.9 -3.36492 | opp_overlap 835478 835473 GCGTCAATGCGATAA TGGCCGTTTGCGC TTGC GCGCAGACGGCCA TTTTCTTTCAGGCGC Bphy_0740 835573 - 836655 + | phosphoserine aminotransferase Bphy_0741 836728 - 837810 + | chorismate mutase Bphy_0742 837889 - 839004 + | histidinol-phosphate aminotransferase TERM 921 839024 - 839046 + G 100 -9.1 -5.38047 | opp_overlap 839023 ATCCATGCAATCCAT GCGCCTCAT CGACT ACGAGGCGC TTTTTTCTGTGACTG Bphy_0743 839013 - 840017 + | prephenate dehydrogenase Bphy_0744 840037 - 841341 + | 3-phosphoshikimate 1-carboxyvinyltransferase Bphy_0745 841390 - 842076 + | cytidylate kinase Bphy_0746 842190 - 843959 + | ribosomal protein S1 Bphy_0747 843982 - 844305 + | integration host factor, beta subunit TERM 922 844407 - 844381 - f 72 -6.6 -4.2828 | opp_overlap 844386, overlap 844386 CGGCATTGACCAAAA GAAAAGCGCC TTTAAGG GGCGCTTTTT TTTCGTCCGTCGCGC TERM 923 844402 - 844386 - f 89 -6.5 -5.13722 | opp_overlap 844386, overlap 844381 TTGACCAAAAGAAAA GCGCC TTTAAGG GGCGC TTTTTTTTCGTCCGT TERM 924 844386 - 844402 + F 100 -7.9 -5.86965 | opp_overlap 844386 844381 TTGACCAAAAGAAAA GCGCCTT TAA GGGGCGC TTTTTTTTCGTCCGT Bphy_0748 844637 - 844930 + | hypothetical protein TERM 925 844937 - 844965 + F 81 -10.9 -3.79747 | overlap 844940 844941 844952 CTCATCTAGCCCTCT AACGCCGTGCGCC GCC GGCGCACGGTCTC TTTCGTCCTCCGTAC TERM 926 844940 - 844963 + F 88 -14.6 -3.48292 | gap 1, overlap 844937 844941 844952 ATCTAGCCCTCTAAC G-CCGTGCGCC GCC GGCGCACGGTC TCTTTCGTCCTCCGT TERM 927 844941 - 844961 + F 100 -18.3 -3.31162 | overlap 844940 844937 844952 TCTAGCCCTCTAACG CCGTGCGCC GCC GGCGCACGG TCTCTTTCGTCCTCC Bphy_0749 844987 - 846162 + | tetratricopeptide domain-containing protein TERM 928 846302 - 846330 + G 71 -10.4 -3.61239 | gap 1 GTCTTGTCACGGGCG CATGTC-TTGCCG AAGT CGGCAACGACGTG TTCTGTCTGGATGTC TERM 929 846933 - 846909 - g 72 -11.4 -3.4582 | opp_overlap 846918, overlap 846907 CGAGTTCACGAAATA CGCCGCGAAC GCGAT GCTCGCGACG CGCATCTCGTTCATG Bphy_0750 846253 - 847665 + | nucleotide sugar dehydrogenase TERM 930 847672 - 847712 + G 76 -13.9 -3.14132 | overlap 847698 CGTGCCTGAAGGCGC GACGCTCGCGCCCGAGG TGGGCGT CATCGCGCGCGAGCGGC TTGCTGCCGCCCGCG TERM 931 847837 - 847894 + G 100 -19.7 -3.35912 | gap 1, opp_overlap 847834 847832, overlap 847863 GCGCCAGGAAGACCG GCTGGGCGGCGCGGCGAACGTCGCGCGC AAC GCG-GCGGCGCTCGGTGCGCAGGCCGGC TTGCTGTGTGTAGTC TERM 932 848018 - 848049 + G 72 -11.6 -3.53012 | gap 1, opp_overlap 848008, overlap 848022 ATCAAGCTACGCGTG TTGTCGCGTCAGCAG CAG CTGCTG-CGCGTCGA TTTCGAGAAGGCGCC Bphy_0751 847658 - 848620 + | rfaE bifunctional protein TERM 933 848624 - 848659 + F 79 -12.6 -3.26471 | gap 2 CTCTTTCACTGATGC CCG-CGCGCGCC-CGT TTCATC GCGTGGCGCGCGGCGG TTCATCTGCGCATCC TERM 934 848718 - 848730 + G 75 -6.9 -4.36914 | overlap 848717 TGACCCTCATCGTCA CCGGC GCG GCTGG TTTTATCGGCAGCAA Bphy_0752 848702 - 849694 + | ADP-L-glycero-D-manno-heptose-6-epimerase Bphy_0753 849771 - 850139 + | hypothetical protein TERM 935 850270 - 850296 + F 90 -10.8 -4.68424 | opp_overlap 850264, overlap 850271 850291 TTCAGATGACTGGCT CCCGCGGCAG ATCCAGC CTGCCGCGGC TTTTTGCGTGCATTC TERM 936 850271 - 850295 + F 87 -14.3 -3.40331 | opp_overlap 850264, overlap 850270 850291 TCAGATGACTGGCTC CCGCGGCAG ATCCAGC CTGCCGCGG CTTTTTGCGTGCATT TERM 937 851153 - 851120 - g 71 -7.5 -4.08767 | gap 1 CGTATCTGCCGAAAA TTTTCGACCGCAGCCG CGT CGATCGCG-TCGAAAA CGTGAGCCAGGCAGC Bphy_0754 850444 - 851346 + | cysteine synthase B TERM 938 851417 - 851388 - T 100 -16.5 -4.0641 | opp_overlap 851394, overlap 851394 TCGCATCCAGATAAA GACAAACGCCGGC ATCT GCCGGCGTTTTTC ATGGTTGTGCGCGAG TERM 939 851411 - 851394 - T 100 -14.1 -4.43283 | opp_overlap 851394, overlap 851388 CCAGATAAAGACAAA CGCCGGC ATCT GCCGGCG TTTTTCATGGTTGTG TERM 940 851394 - 851411 + T 100 -14.1 -4.8269 | opp_overlap 851394 851388 CCAGATAAAGACAAA CGCCGGC ATCT GCCGGCG TTTTTCATGGTTGTG Bphy_0755 852826 - 851438 - | lytic murein transglycosylase B Bphy_0756 852859 - 853782 + | histone deacetylase superfamily protein TERM 941 854149 - 854101 - g 82 -6 -4.82901 | overlap 854104 854105 CGCGCTGCACAAAAA TG-ATGCTTGCGATCCAGCGGCTG CCG CAGCCGGTG-ATCGCTCGCGTGCA CGGCATTGCGACGGC Bphy_0757 853815 - 854624 + | enoyl-CoA hydratase/isomerase Bphy_0758 855581 - 854634 - | alpha/beta hydrolase fold protein TERM 942 855694 - 855750 + H 81 -8.6 -4.30576 | opp_overlap 855695 855699, overlap 855699 TTCAAATCCAATAAA AGTCACGGCGGCCGGTGCCGG-GAGCGT GCG ACGCTCGCTGGCAA-GTCCGCCGTTTCG TTTTCATGATCGAAC TERM 943 855749 - 855695 - H 93 -9.9 -4.75309 | opp_overlap 855694 855699, overlap 855699 TCAAATCCAATAAAA GTCACGGCGGCCGGTGCC-GGGAGCGT GCG ACGCTCGCTGGCAA-GTCCGCCGTTTC GTTTTCATGATCGAA TERM 944 855745 - 855699 - H 76 -13.7 -2.85242 | opp_overlap 855694 855699, overlap 855695 ATCCAATAAAAGTCA CGGCGGCCGGTGCC-GGGAGCGT GCG ACGCTCGCTGGCAA-GTCCGCCG TTTCGTTTTCATGAT TERM 945 855699 - 855745 + H 100 -15.9 -4.24384 | opp_overlap 855699 855695, overlap 855694 ATCCAATAAAAGTCA CGGCGGCCGGTGCCGG-GAGCGT GCG ACGCTCGCTGGCAA-GTCCGCCG TTTCGTTTTCATGAT Bphy_0759 855756 - 856790 + | ABC transporter related TERM 946 857040 - 857085 + G 100 -21.8 -3.14344 | overlap 857078 GGTCGGTTCGTCGAT CGGCACGGCGGCGGCCGTCG TGCCGC TGACGATCGCCGCCGCGCCG TTCATCGCGCGCCTC Bphy_0760 856780 - 857433 + | binding-protein-dependent transport systems inner membrane component TERM 947 858165 - 858135 - g 85 -17 -3.07962 | GTCCATATGTGAACA TCATTGCGATCCGC GAG GCGGACCGCAATAA GCCGTGGGTGGCGAA Bphy_0761 857462 - 858262 + | YaeC family lipoprotein TERM 948 858331 - 858349 + F 90 -7.4 -5.055 | opp_overlap 858314 858311 858331 CCGAATTGGTAGCAA CCCGGA CTTGGCC TCCGGG TTTTTTCCGGATTAG Bphy_0762 858506 - 859255 + | electron transfer flavoprotein alpha/beta-subunit Bphy_0763 859283 - 860218 + | electron transfer flavoprotein alpha subunit TERM 949 860290 - 860261 - f 81 -13 -3.55071 | gap 1, opp_overlap 860261 CGACACCGGCGGAAA GAGGCGCTAGGAT GACGA ATCC-AGCGCCTC TTTTTTCTTTGGGGG TERM 950 860261 - 860290 + F 100 -13 -5.63517 | gap 1, opp_overlap 860261 CGACACCGGCGGAAA GAGGCGCTAGGAT GACGA ATCC-AGCGCCTC TTTTTTCTTTGGGGG Bphy_0764 860321 - 862111 + | acyl-CoA dehydrogenase domain-containing protein TERM 951 862133 - 862156 + T 100 -18.2 -3.72695 | opp_overlap 862133 862136, overlap 862136 CGGTGCATCGAACAA CAACGGCGCC CGAG GGCGCCGTTG TTTCGTCAACAAAAT TERM 952 862156 - 862133 - T 100 -18.2 -3.67597 | opp_overlap 862133 862136, overlap 862136 CGGTGCATCGAACAA CAACGGCGCC CGAG GGCGCCGTTG TTTCGTCAACAAAAT TERM 953 862136 - 862153 + T 100 -14.1 -4.00042 | opp_overlap 862133 862136, overlap 862133 TGCATCGAACAACAA CGGCGCC CGAG GGCGCCG TTGTTTCGTCAACAA TERM 954 862153 - 862136 - T 100 -14.1 -3.97307 | opp_overlap 862136 862133, overlap 862133 TGCATCGAACAACAA CGGCGCC CGAG GGCGCCG TTGTTTCGTCAACAA Bphy_0765 863470 - 862184 - | D-amino-acid dehydrogenase TERM 955 862714 - 862694 - G 90 -7.6 -4.8667 | gap 1, opp_overlap 862706 GAGACCCGACAAAAA CTGGG-TCG AGTA CGAGCCCAG CGCGACAACGAAGTT Bphy_0766 863636 - 864124 + | AsnC family transcriptional regulator Bphy_0767 864229 - 865389 + | radical SAM domain-containing protein Bphy_0768 865945 - 865412 - | hypothetical protein Bphy_0769 866299 - 866553 + | ribosomal protein S16 TERM 956 866703 - 866718 + G 71 -10.4 -3.58037 | opp_overlap 866696 GGCGAAAAGGCAGCC TGGCGC GAAG GCGCCA TTTGGCCCGTTCGTC Bphy_0770 866650 - 867345 + | 16S rRNA processing protein RimM TERM 957 867731 - 867755 + G 84 -17.3 -2.78384 | overlap 867710 GCGGCCGCTATGAGG CGATCGATCAG CGT CTGATCGATCG TGTCGTCGACGAAGA Bphy_0771 867370 - 868137 + | tRNA (guanine-N1)-methyltransferase Bphy_0772 868282 - 868665 + | ribosomal protein L19 TERM 958 868681 - 868697 + F 100 -9.4 -5.72622 | opp_overlap 868681 AAGCTGTAAGAAAAA GCACCC CTCGC GGGTGC TTTTTTGTTTGTCAG TERM 959 868697 - 868681 - f 100 -9.4 -5.08088 | opp_overlap 868681 AAGCTGTAAGAAAAA GCACCC CTCGC GGGTGC TTTTTTGTTTGTCAG TERM 960 869337 - 869351 + G 93 -3.4 -5.44119 | overlap 869338 CGTGCTGAACTGGGA AGGCGG TAA CCGTCG TTTTTTTGCAATGCC Bphy_0773 868759 - 869466 + | NUDIX hydrolase TERM 961 870205 - 870217 + G 74 -10.5 -3.75024 | TGCGTTCTCCACCTT CGCGC AGC GCGCG TTCTTCGTGATCGAC Bphy_0774 869630 - 870568 + | cobalamin biosynthesis protein CbiB Bphy_0775 870944 - 870657 - | hypothetical protein Bphy_0776 871902 - 870949 - | ribosome small subunit-dependent GTPase A TERM 962 871660 - 871707 + g 71 -11.8 -3.2614 | opp_overlap 871658 871656, overlap 871661 871664 GCGATACAGCAGATT GCGCCGTTCGCCGATCTCGACG ATCA CGCCCTGATCGGCGGACGTCGG TTCGTATAGCACCTG TERM 963 871661 - 871706 + g 74 -15.3 -2.5547 | opp_overlap 871658 871656, overlap 871660 871664 CGATACAGCAGATTG CGCCGTTCGCCGATCTCGACG ATCA CGCCCTGATCGGCGGACGTCG GTTCGTATAGCACCT TERM 964 871664 - 871703 + g 70 -14.2 -2.58714 | opp_overlap 871658 871656, overlap 871661 871660 TACAGCAGATTGCGC CGTTCGCCGATCTCGACG ATCA CGCCCTGATCGGCGGACG TCGGTTCGTATAGCA Bphy_0777 873158 - 871899 - | Ste24 endopeptidase TERM 965 873540 - 873551 + G 75 -7.2 -4.36914 | opp_overlap 873526 873540, overlap 873526 AGCGGACGCCACAGA GCGC ATCC GCGC TTTTCTCGGCCAGCA Bphy_0778 873247 - 873870 + | exonuclease RNase T and DNA polymerase III Bphy_0779 874500 - 873874 - | molybdenum cofactor synthesis domain-containing protein Bphy_0780 875062 - 874481 - | hypothetical protein TERM 966 875030 - 875056 + g 76 -14.4 -3.10112 | GCTGGGACGGTCATA CCCGTTGTCGTC GAC GACGGCGGCGGG TTCCATGGGTTGAAT Bphy_0781 875311 - 876681 + | peptidase U62 modulator of DNA gyrase Bphy_0782 877373 - 876873 - | dihydrofolate reductase TERM 967 877117 - 877086 - G 100 -10.9 -4.7254 | opp_overlap 877106, overlap 877087 ACCGCCTATCAAAAA CGCCTCGCC-CGCAC CATC GCGCGCGGCGAG-CG CCAACGCGTCGTCGA TERM 968 877118 - 877087 - G 72 -10.9 -3.43042 | gap 2, opp_overlap 877106, overlap 877086 CCGCCTATCAAAAAC GC-CTCGCC-CGCAC CATC GCGCGCGGCGAGCGC CAACGCGTCGTCGAG Bphy_0783 879000 - 877513 - | sigma-54 dependent trancsriptional regulator TERM 969 878307 - 878293 - G 72 -12.8 -3.15544 | GTTGATCGGGACGAA CGGCGC CTT GCGCCG CGGCGAACGCTCGTG TERM 970 878719 - 878740 + g 71 -12.3 -3.18681 | gap 1, opp_overlap 878701 CGCCATGTCGACGAT GCCCGCGCAC AAG GT-CGCGGGC TTGATGAGCTTGCCG Bphy_0784 879924 - 879025 - | hypothetical protein TERM 971 879697 - 879715 + g 71 -8 -4.15106 | GCCATAGCCCGGCGC GCCGCGGC CGC GCTGCGAC TTTTCCAGATTCGTC TERM 972 879867 - 879908 + g 71 -8.1 -4.10437 | gap 3, opp_overlap 879849 879876 879878, overlap 879868 CGCGCAGCATCGCGG C-GGCAGGAATAGCCGCGAG CCGGA CCCGCGGCT-TTCC-GCCTG TTGTTTCGTTCATCA TERM 973 879868 - 879906 + g 77 -11.8 -3.63901 | gap 2, opp_overlap 879849 879876 879878, overlap 879867 GCGCAGCATCGCGGC GGCAGGAATAGCCGCGAG CCGGA CCCGCGGCT-TTCC-GCC TGTTGTTTCGTTCAT Bphy_0785 881315 - 880032 - | peptidase C39 bacteriocin processing TERM 974 881044 - 881056 + g 71 -7.7 -4.13014 | opp_overlap 881036 ACAACCATCATCCGG CGGAT CAG ATCCG TTTTGGGGATGTCGA TERM 975 881322 - 881377 + r 89 -16 -3.21416 | gap 1, overlap 881323 881324 881347 CCGGGACATGCTGGT C-TCCTTCCCGAATGCGCCGGCGGCTG CAT CGGCCGCCGGCGCATCCCGTATGGCTG TTCCTGCTACCGCTG TERM 976 881323 - 881375 + r 100 -19.7 -3.17051 | overlap 881322 881324 881347 CGGGACATGCTGGTC TCCTTCCCGAATGCGCCGGCGGCTG CAT CGGCCGCCGGCGCATCCCGTATGGC TGTTCCTGCTACCGC TERM 977 881324 - 881374 + r 100 -23.2 -2.50016 | overlap 881323 881322 881347 GGGACATGCTGGTCT CCTTCCCGAATGCGCCGGCGGCTG CAT CGGCCGCCGGCGCATCCCGTATGG CTGTTCCTGCTACCG Bphy_0786 882398 - 881922 - | hypothetical protein TERM 978 882077 - 882033 - G 100 -25.8 -3.14564 | gap 1, opp_overlap 882068 TGAGCCGTGCATCAA CTGCGGCGGCGCCGCGACCAT CACC ATGTCCGCGGCGCCGCCGC-G CTGGCGCGACAACAT TERM 979 882131 - 882159 + g 74 -10.2 -3.70076 | overlap 882157 TCGTCGCCGCGCCGT CGGCGGGCACGT TCAGC ACCTGCGCGCCG TTTAAATCGGTTTCA TERM 980 884301 - 884289 - g 71 -9.1 -3.70902 | overlap 884293 TGCGGCATATGGAAA GCGAG CCG CTCGC GCAACACGCGGACAT Bphy_0787 882947 - 884341 + | sigma-54 dependent trancsriptional regulator TERM 981 884365 - 884343 - f 71 -10.4 -3.57144 | TGCCGCATCTGTAAA GCGGCGGGGC GCT GCCCCCCTGC GTGCGAGACTGTCAT TERM 982 884391 - 884410 + F 100 -16.4 -4.13995 | opp_overlap 884391 GTCATCGCGAATGAA GCCCGGCC GGCT GGCCGGGC TTTCCTTTCTGCAGC TERM 983 884410 - 884391 - f 89 -16.4 -3.34895 | opp_overlap 884391 GTCATCGCGAATGAA GCCCGGCC GGCT GGCCGGGC TTTCCTTTCTGCAGC Bphy_0788 884570 - 885541 + | thymidylate synthase TERM 984 885597 - 885573 - T 93 -12.8 -4.13767 | opp_overlap 885573 TCCCCGATGTGAAAA CGCCCACTGC CATTC GCGGTGGGCG TTTTCATTCGCGGGC TERM 985 885573 - 885597 + T 100 -15 -4.4078 | opp_overlap 885573 TCCCCGATGTGAAAA CGCCCACTGC CATTC GCGGTGGGCG TTTTCATTCGCGGGC Bphy_0789 888175 - 885629 - | putative prolin-rich transmembrane protein TERM 986 886863 - 886913 + g 73 -13.9 -2.82023 | opp_overlap 886874, overlap 886859 TGGTTGGTCGGCTGG CCGTGC-ACGAACGCCGCTGCCGGC ATC GCCGTCA-CGGCGCCCGGCGCACGG TAGTTGATATACGTG TERM 987 886901 - 886874 - G 72 -13.4 -3.14132 | gap 1, opp_overlap 886863 886859 CTGGCCGTGCACGAA CGCCGCTGCCGGC ATC GCCGTCA-CGGCG CCCGGCGCACGGTAG Bphy_0790 889042 - 888326 - | ArsR family transcriptional regulator TERM 988 889007 - 888955 - G 70 -13.9 -2.62616 | opp_overlap 888953 TCAGCGCCCACAGCA TCGCGGCCCGGCCCGGATCGGCGAG CAG CGCACCGATCCGGCTCAAGCCGGGG AAGTGATTCGATTCT Bphy_0791 889228 - 889368 + | hypothetical protein TERM 989 890302 - 890353 + G 74 -2.2 -4.82901 | gap 2, overlap 890335 CGGCCATTCGATCGG CGACGGCGC--ACAGATCATCCAG TGGCAT CTGGTCGGCATGTTCGCGCCGTCG TTTTTCTCGGCGCGC Bphy_0792 889502 - 890761 + | major facilitator transporter TERM 990 891254 - 891302 + G 75 -12.5 -3.54424 | gap 4, overlap 891287 891288 GGGCTTGCTCGATGG GCGC-CGCGCGACCACGCACTGGCG CGA CGCCGG-GCG-GCTCGC-CGAGCGC TTTGCGCGCGTGCAG Bphy_0793 890793 - 891884 + | AraC family transcriptional regulator Bphy_0794 891968 - 892474 + | thioesterase superfamily protein Bphy_0795 893938 - 892538 - | fumarate hydratase, class II TERM 991 894012 - 893983 - R 70 -12.1 -2.71791 | gap 1, overlap 893982 AGGCTTCCGGGAAAG CGGCGCAGCACGCG CTC CTCG-ACTGCGCCG TATGACTGTGCGGCT Bphy_0796 895714 - 894026 - | phospholipase D/transphosphatidylase TERM 992 895088 - 895100 + g 73 -9.1 -3.8211 | CGCGATCTGGTTGTC GGCGA TCA TCGCC TTGTTGTGCATGCGC Bphy_0797 897515 - 896124 - | MATE efflux family protein TERM 993 896401 - 896387 - G 85 -7.8 -4.63527 | CGACGATCTGAAAAA TGGCCG CGA CAGCCA GCAGCGAACTGGCAA TERM 994 896740 - 896726 - G 72 -11.4 -3.51934 | overlap 896724 CCGTCGCGAGAAACA GCGTCG ACT CGACGC CATACGTGATCGCCA TERM 995 897545 - 897567 + r 87 -6.9 -5.01422 | gap 1, overlap 897546 GCGCGATAGGCGGTA C-GCGCGGTC AGCA GCCCGCGCTG TTTGTTTTTCTGTCC TERM 996 897546 - 897565 + r 82 -10.6 -4.10863 | overlap 897545 CGCGATAGGCGGTAC GCGCGGTC AGCA GCCCGCGC TGTTTGTTTTTCTGT Bphy_0798 897944 - 897726 - | hypothetical protein TERM 997 898179 - 898156 - H 82 -14.6 -3.01712 | opp_overlap 898138 CCGGTCTGTGGAATA GCCTGCCGCA TTTT TGCGACAGGC GGATAGCGTGGGCGT Bphy_0799 898268 - 898720 + | putative signal peptide protein Bphy_0800 898786 - 899052 + | hypothetical protein TERM 998 899102 - 899119 + F 100 -14.1 -4.87803 | CCGTTCGGCGCACCA GCCCGGC ACGC GCCGGGC TTTTCTTTGCGCGTA TERM 999 901435 - 901393 - g 80 -8.5 -4.45771 | gap 1, opp_overlap 901424 AGGCCAAAATAGAAA TCGCGGCGAAGCTCAG AAAGATGTGGGA CTGAGCG-CGCCGCGA TCGGGCGGCGCCCGA Bphy_0801 899172 - 901424 + | UvrD/REP helicase Bphy_0802 902252 - 901485 - | hypothetical protein TERM 1000 902057 - 902082 + g 95 -14.7 -4.18018 | CCCATGCGTACTGGC CGCCCTGCAGC ATCC GCTGCACGGCG TTTTCGGTCAGCGGC Bphy_0803 902805 - 902482 - | branched-chain amino acid transport Bphy_0804 903569 - 902802 - | AzlC family protein TERM 1001 902954 - 902933 - G 71 -7.9 -4.11664 | gap 1 GCCAGAAGAACGAAA GCGCGCCGGC TGT GACGGCG-GC CCCCAGATACCGCAC Bphy_0805 904509 - 903682 - | AraC family transcriptional regulator Bphy_0806 905055 - 904552 - | CreA family protein TERM 1002 905194 - 905175 - R 100 -15 -5.47159 | opp_overlap 905170 905169 CGCAACAAAGAAAAA GGCCCGCA CGTA TGCGGGCC TTCGAATTTTGGCTC TERM 1003 905330 - 905311 - R 100 -9.3 -5.36441 | opp_overlap 905311 905310 TTGCTACATAAAAAA GCCCGTT GTGGTT AACGGGC CTTTGCAATTCTTGG TERM 1004 905534 - 905550 + r 70 -5.1 -4.42238 | opp_overlap 905533 GTGACTTCGATCAAC GCTCG AGCAGTG CGAGC TTTTCCTTCACGTCC Bphy_0807 905852 - 905529 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Bphy_0808 906133 - 907332 + | nicotinate phosphoribosyltransferase TERM 1005 907963 - 907988 + G 82 -16.1 -3.14132 | TGGTGCTGCTCGCCG GCCCGCAGACG TATG CGTCGGCGGGC TTGCTGCCCGAGACG Bphy_0809 907542 - 908204 + | hypothetical protein TERM 1006 908796 - 908829 + G 71 -7.4 -4.09551 | overlap 908818 TCTGGTCGCGAATGC TGGCGGTTCGCT GTCGCCGCTG GGCGACCCGCCA TTGTTTCTCGGCTTT Bphy_0810 908215 - 909675 + | citrate transporter Bphy_0811 909730 - 910719 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_0812 910716 - 912200 + | hypothetical protein TERM 1007 912244 - 912216 - T 100 -20.4 -4.16943 | opp_overlap 912216 GGCCAGACGTGAAAA GGGCGCGTGATC GCGAG GATCACGCGCCC TTTTTCTGGCCGAAG TERM 1008 912216 - 912244 + T 100 -20.4 -4.82901 | opp_overlap 912216 GGCCAGACGTGAAAA GGGCGCGTGATC GCGAG GATCACGCGCCC TTTTTCTGGCCGAAG Bphy_0813 912763 - 912275 - | GCN5-related N-acetyltransferase Bphy_0814 913047 - 912763 - | hypothetical protein Bphy_0815 914396 - 913101 - | molybdenum cofactor synthesis domain-containing protein Bphy_0816 915092 - 914478 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 1009 914835 - 914799 - G 74 -13 -3.24747 | gap 1, overlap 914831 914833 CGCCGACAGCACGAA CGGCGTGCTCGCGGCGC GCAG GC-CCGCAAGCAGACCG GCGAGCGGGCCGGGG Bphy_0817 916220 - 915108 - | molybdenum cofactor biosynthesis protein A TERM 1010 916131 - 916100 - G 74 -10.9 -3.64703 | gap 1, opp_overlap 916094 GGTCCGTCACCGAAA TACGCAGATCGCGC AACGG GCGCGA-CAGCGTA TCGGTCAATTCGCCG TERM 1011 916348 - 916330 - R 100 -16 -5.08601 | opp_overlap 916330 TGACGGCAATAAAAA GCCCGCCT TGG AGGCGGGC TTTTTCGGGGTGCCC TERM 1012 916330 - 916348 + r 100 -16 -4.59773 | opp_overlap 916330 TGACGGCAATAAAAA GCCCGCCT TGG AGGCGGGC TTTTTCGGGGTGCCC Bphy_0818 919685 - 916407 - | ribonuclease TERM 1013 916488 - 916463 - G 80 -14.7 -3.16881 | opp_overlap 916480 TATCGACGGGAGGAA GCGCCTTGCGC TCGC GCGCAACGCGC GCGGGCTTCACGGTC TERM 1014 917641 - 917669 + g 70 -10.9 -3.35522 | overlap 917602 917639 TCCACACGTTCCGGA CGTGCCTCGCGTG CTT CACGCGGTTCACG TGTTTCGCGGCCTTC TERM 1015 919761 - 919779 + H 71 -8.1 -4.09656 | gap 1 CCGGCGGGCGGACAG GGCAGCGG CATG CCGC-GCC TTATTGTGTTTTCAC TERM 1016 920950 - 920940 - g 84 -8.2 -4.57073 | overlap 920941 GATGCTCGCGAAAAA GCGC GCG GCGC TCGTCAATCTTCACG Bphy_0819 920449 - 921510 + | RluA family pseudouridine synthase Bphy_0820 921491 - 922150 + | HAD family hydrolase Bphy_0821 922147 - 922539 + | Rieske (2Fe-2S) domain-containing protein TERM 1017 923452 - 923400 - g 79 -10.7 -4.09685 | CTGGACTGGGGAAAA GAGCGTCG-AGTTGGGTCTCGCCGA CGGCT TCGGCGACA-CGAACTACGTCGCTC GCGAAATCATCAAGG Bphy_0822 922585 - 923595 + | peptidase S49 TERM 1018 923618 - 923641 + T 85 -15.2 -3.15663 | TGGGAGCCTGGGAGC GGCGGCCGAC ATCT GGCGGCCGCC TTCCTGGGCGTCAGT TERM 1019 923685 - 923675 - T 74 -2.4 -5.01535 | opp_overlap 923675 923677, overlap 923676 923677 CCAGAATCAGAAAAA TCGC CGG GCGC TTGTGGAGTTCAGGC TERM 1020 923677 - 923706 + T 78 -9.3 -3.96068 | gap 1, opp_overlap 923675 923676 923677, overlap 923675 AGAATCAGAAAAATC GCCGGGCGCTTG TGGAGTT CAGGCG-CCGGC TTCTTCTTCCAGTCG Bphy_0823 924371 - 923652 - | uroporphyrin-III C/tetrapyrrole methyltransferase Bphy_0824 924988 - 924368 - | maf protein TERM 1021 924769 - 924811 + g 81 -11.3 -4.18018 | gap 1, opp_overlap 924763 924766 CAGAGCCAATGACGA GCGCGCGCCCGTCGCC CGCAAGCGCCAC GGCGACGG-CGCGGGC TTTTGCCTGCGCGAG TERM 1022 924814 - 924837 + g 71 -7.4 -4.15788 | gap 1, overlap 924815 CGACGGCGCGGGCTT TTGC-CTGCGC GAG GCGCAGCGCGG TTTGTTCGGGCAATT Bphy_0825 925228 - 925866 + | hypothetical protein Bphy_0826 925980 - 926159 + | ribosomal protein L32 TERM 1023 926267 - 926248 - f 76 -4.9 -4.72272 | opp_overlap 926249, overlap 926249 CCGGTTGATCAAAAA GGCGGCA TTCAAC TGCCGCT TTTTTGTGCCTGAAA TERM 1024 926249 - 926266 + F 100 -8.4 -5.28176 | opp_overlap 926248 926249 CGGTTGATCAAAAAG GCGGCA TTCAAC TGCCGC TTTTTTGTGCCTGAA TERM 1025 926574 - 926542 - g 73 -5.6 -4.44667 | CTTCGCAAGAAGAAA GACTCG-TCGATGCGC GTG GCGC-TCAATCGCGTC AAAGACGACGAGGCG TERM 1026 927272 - 927255 - g 76 -5.5 -4.57569 | opp_overlap 927244 927246, overlap 927256 TGATGCCGTCAAAAA TGGCGTT CTTG AACGCCT TGCCCGCGCGATGGA Bphy_0827 926296 - 927426 + | fatty acid/phospholipid synthesis protein PlsX Bphy_0828 927426 - 928415 + | 3-oxoacyl-(acyl-carrier-protein) synthase III Bphy_0829 928509 - 929441 + | malonyl CoA-acyl carrier protein transacylase Bphy_0830 929507 - 930256 + | 3-oxoacyl-(acyl-carrier-protein) reductase Bphy_0831 930404 - 930643 + | acyl carrier protein TERM 1027 930798 - 930818 + F 79 -12.7 -3.38314 | overlap 930797 GTTCAAGGCGCACTG GCCGATAAA GCA TTTATCGGC TCTTTCGCCATTGCG TERM 1028 930965 - 930920 - f 90 -16.3 -3.60296 | gap 1, opp_overlap 930922, overlap 930922 GATCGTCAGGTTAAA CAGCCACAGG-GCACACAGG GCGCTTT CCTGTGCGCTCCTGTGGCTT TTGTTTTGTCATCTA TERM 1029 930922 - 930963 + F 100 -17.4 -5.20781 | gap 1, opp_overlap 930920 930922 TCGTCAGGTTAAACA GCCACAGG-GCACACAGGG CGCTT TCCTGTGCGCTCCTGTGGC TTTTGTTTTGTCATC TERM 1030 930963 - 930922 - f 100 -18.9 -3.38046 | gap 1, opp_overlap 930922, overlap 930920 TCGTCAGGTTAAACA GCCACAGG-GCACACAGG GCGCTTT CCTGTGCGCTCCTGTGGC TTTTGTTTTGTCATC Bphy_0832 930949 - 932235 + | 3-oxoacyl-(acyl-carrier-protein) synthase 2 TERM 1031 932346 - 932304 - f 100 -21.2 -3.14132 | opp_overlap 932304 932333 932334 932335, overlap 932325 CCGCTCCCGCATTAA TCGGCGGACCCTCGCAACGC ATT GCGCTGCGGCGGTCCGCCGC ATTGCATCTGGCGAC TERM 1032 932304 - 932347 + F 100 -19.6 -3.12351 | gap 1, opp_overlap 932304 932325, overlap 932333 932334 932335 CCGCTCCCGCATTAA T-CGGCGGACCCTCGCAACGC ATT GCGCTGCGGCGGTCCGCCGCA TTGCATCTGGCGACC TERM 1033 932657 - 932684 + G 91 -8.5 -4.74132 | gap 1, overlap 932658 TTGCAGCAGCTGCTA C-TCGCGGTCGA CATGC TTGACCGCGATG TTTTTCGTGAACTCT TERM 1034 932658 - 932682 + G 84 -12.2 -3.98658 | overlap 932657 TGCAGCAGCTGCTAC TCGCGGTCGA CATGC TTGACCGCGA TGTTTTTCGTGAACT Bphy_0833 932348 - 932731 + | hypothetical protein Bphy_0834 932864 - 933463 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1035 933719 - 933695 - g 78 -4.1 -4.72272 | opp_overlap 933702 GCGCTGGATCAAAAA GATCGCGCGGC ATG GTCGTGCTATC ACCTGATCGGCGACG Bphy_0835 933548 - 934201 + | anti sigma-E protein, RseA Bphy_0836 934206 - 935246 + | sigma E regulatory protein, MucB/RseB Bphy_0837 935266 - 936774 + | protease Do Bphy_0838 936771 - 937049 + | glutaredoxin 2 TERM 1036 937163 - 937191 + F 93 -9.5 -4.7629 | opp_overlap 937163 TTCACTTACTTACAA GGCGTGCTCCG CAATCGT CCGAGCGCGCC TTTTTCGCTTGATCG Bphy_0839 937214 - 939007 + | GTP-binding protein LepA TERM 1037 939142 - 939112 - g 86 -14.7 -3.53012 | gap 1 GTTTTCCTGCCGAAA CGGCGTCGGGCTGC TGAC GCAGCC-GTCGCCG AGTTCGACAATCAGC TERM 1038 939212 - 939192 - g 100 -13.9 -4.25104 | overlap 939153 939156 CTTCGCGGACGAAAA CGCGCCCGC CAC GCGCGCGCG TCTGCGTGAGGAGAA Bphy_0840 939028 - 939921 + | signal peptidase I TERM 1039 940236 - 940250 + G 100 -12.8 -4.64334 | ATTCCGTTCTGAACT GCGCGG TGG CCGCGC TTTTGTTCCAACGTT TERM 1040 941349 - 941391 + G 78 -16.2 -2.71144 | opp_overlap 941331 CGGGCGATCTCGAAC CCGGCGTCGCCGGCGCGG TGCATAC CCGCGTGGCCGATGCCGG TCATTGAACGCAATA Bphy_0841 940073 - 941398 + | ribonuclease III TERM 1041 942142 - 942156 + G 79 -7 -4.58283 | opp_overlap 942141, overlap 942143 AGTTTGAGACGGAAG GGCGCC TGC GGCGCA TTTTTGCAACGATTC Bphy_0842 941499 - 942362 + | GTP-binding protein Era TERM 1042 942459 - 942515 + G 76 -13.6 -3.05384 | opp_overlap 942472 942499 942500 CGACGACGCCACGGG CGCGCGGGACGAACC-GTTCGCGCCGCC GGC GCCAGC-CAAACCGGCGCGTCCCGCGCG TTCCGTGAAGCGCGG TERM 1043 942532 - 942554 + G 76 -5.5 -4.57569 | gap 1, opp_overlap 942500 942499, overlap 942533 TCCGTGAAGCGCGGC ACGTCG-CGC AAAA GCGGCGACGA TTTTTCGGAGGATGG TERM 1044 942640 - 942599 - g 89 -12.8 -4.08692 | opp_overlap 942623, overlap 942587 942602 CAACGCCGCGTAAAA CATCGGCGCGCCGTTCGC CGTCTC GCGTGCCGCGCGCCGCTG CCTCCGAATTCCGCA TERM 1045 943261 - 943284 + G 75 -3.1 -4.72986 | gap 1 CGAGCGCAGACCATC GCGCA-AAGC AAGAC GCTGATGCGC TTTTTGCTCAACATC Bphy_0843 942349 - 943359 + | DNA repair protein RecO Bphy_0844 943356 - 944120 + | pyridoxal phosphate biosynthetic protein PdxJ Bphy_0845 944144 - 944551 + | holo-acyl-carrier-protein synthase Bphy_0846 944619 - 945650 + | Beta-N-acetylhexosaminidase TERM 1046 945702 - 945678 - T 100 -12.2 -4.49316 | gap 1, opp_overlap 945678 AGTAGCAATAAGAAA GGACGGGTCTC GATC GAG-CCCGTCC TTTTGTTTTGCCGGC TERM 1047 945678 - 945702 + T 100 -12.2 -5.07652 | gap 1, opp_overlap 945678 AGTAGCAATAAGAAA GGACGGGTCTC GATC GAG-CCCGTCC TTTTGTTTTGCCGGC Bphy_0847 947110 - 945728 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 1048 946499 - 946462 - G 72 -13.4 -3.08679 | gap 1, overlap 946465 GCTCGTGACCGAACA GCAGGCTGTCGAGCGGC CGGCC GCC-CGCGACGGCCTGC GCCGAGCGGCAGTCG TERM 1049 947062 - 947037 - G 75 -3.9 -4.65895 | GTGTCGACGGAAAAA CCGTCGGCG GCCAGAAT CGCGGACAG GCCTGACAGGCTATT TERM 1050 947138 - 947185 + r 100 -22.1 -3.21416 | TGTTCAGATGGACGG GTGTCCGACGTGCGCGGC-CCGC CGGG GCGGCGCCGTGCGCG-CGGACGC TTGATGATCGGGGTG TERM 1051 947250 - 947292 + r 74 -8.2 -4.13945 | opp_overlap 947261 CAAAAGTCCCGGTTC CGGTCGAAGAAGCGGCGCAC CTC GAGTTCCGCTTCGTCGCGCG TTTTGCCATAGCGCT Bphy_0848 947440 - 947234 - | CsbD family protein TERM 1052 947682 - 947655 - R 100 -12.8 -5.40072 | opp_overlap 947661, overlap 947661 CGGTCGCGAAAAAAA GAAAAAGCGCCC CGAA GGGCGCTTTTTA ATTCCAAAGACCCTG TERM 1053 947676 - 947661 - R 100 -11.8 -5.86609 | opp_overlap 947661, overlap 947655 CGAAAAAAAGAAAAA GCGCCC CGAA GGGCGC TTTTTAATTCCAAAG TERM 1054 947661 - 947676 + r 100 -11.8 -4.8622 | opp_overlap 947655 947661 CGAAAAAAAGAAAAA GCGCCC CGAA GGGCGC TTTTTAATTCCAAAG Bphy_0849 948300 - 947743 - | translation elongation factor P Bphy_0850 949810 - 948629 - | hypothetical protein TERM 1055 949092 - 949079 - G 88 -9.5 -4.59773 | overlap 949080 GGGCAGGCCGAAAAA GCGCG CAAC CGCGC CCGACACGCGGCCTT TERM 1056 950071 - 950045 - g 72 -2.9 -4.62069 | gap 1, overlap 950046 950047 GTTCGACCCGAAAAA GGTGT-TGCGGC AGCT GCCGCACATGCC CGGCGTCTATCGTTA Bphy_0851 949920 - 952142 + | excinuclease ABC, C subunit Bphy_0852 952283 - 952873 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Bphy_0853 953121 - 952978 - | hypothetical protein TERM 1057 953235 - 953279 + H 76 -12.9 -3.14463 | opp_overlap 953243 953248, overlap 953249 953270 CGAGACTCGTCTCCC GCTCCAAACACAGGGGGAAGC CAA GCTTCCCTTTTTGTTTGATGC TTCATAAGAAGCATT TERM 1058 953249 - 953265 + H 100 -12.3 -5.34309 | opp_overlap 953248 953243, overlap 953235 CGCTCCAAACACAGG GGGAAGC CAA GCTTCCC TTTTTGTTTGATGCT TERM 1059 953360 - 953343 - H 84 -4.1 -5.28176 | GTCATGCAGAAAAAA TCTGCGA GCCG TTGCAGA TGCAACTGAGTACGG TERM 1060 953502 - 953475 - H 100 -18.6 -3.9941 | opp_overlap 953475 953480, overlap 953480 GCCTCCAGAAGCAAA GAAAAGCCCCGA GATG TCGGGGCTTTTC TTTTTCAGCGCTTCA TERM 1061 953475 - 953502 + H 100 -18.6 -4.59853 | opp_overlap 953475 953480, overlap 953480 GCCTCCAGAAGCAAA GAAAAGCCCCGA GATG TCGGGGCTTTTC TTTTTCAGCGCTTCA TERM 1062 953497 - 953480 - H 100 -12.7 -5.02357 | opp_overlap 953475 953480, overlap 953475 CAGAAGCAAAGAAAA GCCCCGA GATG TCGGGGC TTTTCTTTTTCAGCG TERM 1063 953480 - 953497 + H 100 -12.7 -5.26119 | opp_overlap 953480 953475, overlap 953475 CAGAAGCAAAGAAAA GCCCCGA GATG TCGGGGC TTTTCTTTTTCAGCG TERM 1064 953721 - 953767 + G 75 -12 -3.49653 | overlap 953746 953747 GACGCGTGGCATCTT CTGGCATACGGCGACCACGCGC CCG GCGCGCGCGTGCCGCTTGCCGG TTATCTGCGCGTGCT Bphy_0854 953535 - 954035 + | GCN5-related N-acetyltransferase Bphy_0855 954938 - 954048 - | putative inner membrane protein Bphy_0856 955470 - 954991 - | hypothetical protein Bphy_0857 956114 - 955488 - | electron transport protein SCO1/SenC TERM 1065 956512 - 956532 + G 100 -7.5 -5.52096 | overlap 956513 AGCACTTCCCGCTTT TCTGTCTCC GAC GGAGACGGC TTTTTTCTTCGATTT TERM 1066 956513 - 956531 + G 79 -11 -3.88817 | overlap 956512 GCACTTCCCGCTTTT CTGTCTCC GAC GGAGACGG CTTTTTTCTTCGATT TERM 1067 957045 - 957001 - g 89 -13 -4.17878 | opp_overlap 957015 957018, overlap 957004 CGAAATCAAACCAAA GGAT-GTCGATAAAGGCCGCGC GCT GCGCG-CCTTTCTCGACGAGCC GCCGTTTACAGGCCG TERM 1068 957041 - 957004 - g 72 -13.5 -3.08604 | gap 1, opp_overlap 957015 957018, overlap 957001 AATCAAACCAAAGGA TGTCGATAAAGGCCGCGC GCT GCGCG-CCTTTCTCGACG AGCCGCCGTTTACAG TERM 1069 957015 - 957031 + G 73 -9.3 -3.85698 | opp_overlap 957004 957001, overlap 957018 AGGATGTCGATAAAG GCCGCGC GCT GCGCGCC TTTCTCGACGAGCCG Bphy_0858 956492 - 957241 + | HAD family hydrolase TERM 1070 957874 - 957860 - g 72 -8.5 -4.03234 | opp_overlap 957860 957859 CGGCTTCCAGACAAA GCCCG ATTTA CGGGC CTTCTGCGACTACAT Bphy_0859 957294 - 958730 + | alpha,alpha-trehalose-phosphate synthase (UDP-forming) TERM 1071 958758 - 958777 + T 100 -13.6 -5.4505 | opp_overlap 958758 ACGCCGATTAAAAAA GCCGCTTC GATC GAAGCGGC TTTTTTGTTGCGGCC TERM 1072 958777 - 958758 - T 100 -13.6 -5.14965 | opp_overlap 958758 ACGCCGATTAAAAAA GCCGCTTC GATC GAAGCGGC TTTTTTGTTGCGGCC Bphy_0860 960713 - 958821 - | ABC transporter related TERM 1073 959926 - 959937 + g 72 -7.2 -4.25104 | TCCGACTTCACGGTC GCGC TGAA GCGC TTTTGCTCGCGAAAC TERM 1074 960249 - 960263 + g 72 -2.8 -4.60487 | overlap 960247 AGTGATTCGGCTCGC CAGC GTGCCCG GCTG TTTTTCCGCGTAATA TERM 1075 960982 - 960994 + H 71 -6.9 -4.11216 | TCAGATGCTCGGACC GTCGG CAA CCGGC TTTTGGCGCTAGCGC TERM 1076 962427 - 962407 - g 77 -8.2 -4.2461 | ACGTCTACGAAGAAA TGCTGCGC GCGAA GCGCCGCA CGGTGCTGCGCGAAG Bphy_0861 961392 - 962456 + | glycosyl transferase group 1 TERM 1077 962505 - 962549 + F 100 -20.8 -3.53343 | overlap 962510 962513 GGTCTCTACGGATGT CGCCGCAACGCCCCGCATGT GTCCA ACATGCGGGGCGTTGTTGCA TTTGCGCCGCACCTT TERM 1078 962510 - 962544 + F 100 -24.5 -3.27525 | overlap 962505 962513 CTACGGATGTCGCCG CAACGCCCCGCATGT GTCCA ACATGCGGGGCGTTG TTGCATTTGCGCCGC TERM 1079 962513 - 962541 + F 100 -20.4 -3.77832 | overlap 962510 962505 CGGATGTCGCCGCAA CGCCCCGCATGT GTCCA ACATGCGGGGCG TTGTTGCATTTGCGC TERM 1080 962673 - 962648 - f 74 -14 -2.59668 | overlap 962647 962662 962663 TAATATCCCTATAAT GGCCGTGCCG CAAATC CGGCACAGCC GGTCGACATGAGGAG TERM 1081 962720 - 962745 + G 77 -12.5 -3.63694 | gap 1, opp_overlap 962715 962714 962710 CGAAACAGACGCGTG CGAGCGCGGCGC CCG GCGCCG-GCACG TTGTTCGCGCTGCGT TERM 1082 962941 - 962967 + G 71 -7.8 -4.10953 | overlap 962939 962946 TTTCATCCGCTTCCC CAGTGGCTGCGC CAG GCGCTGCGTCTG TTTGCTTTCCTGGGT Bphy_0862 962695 - 963552 + | hypothetical protein TERM 1083 963938 - 963976 + G 77 -12.6 -3.59979 | gap 2, opp_overlap 963960 963961, overlap 963938 963939 TGGTGTCGCTGATTC G--CTGGCGCATCGCCAT CAGGA ATGGCGATGCGCCGGATC TTTCGCGTGCGGGCC TERM 1084 963938 - 963974 + G 93 -18.8 -3.38046 | opp_overlap 963960 963961, overlap 963938 963939 TGGTGTCGCTGATTC GCTGGCGCATCGCCAT CAGGA ATGGCGATGCGCCGGA TCTTTCGCGTGCGGG TERM 1085 963939 - 963973 + G 100 -22.3 -2.62613 | opp_overlap 963960 963961, overlap 963938 963938 GGTGTCGCTGATTCG CTGGCGCATCGCCAT CAGGA ATGGCGATGCGCCGG ATCTTTCGCGTGCGG Bphy_0863 963631 - 964089 + | membrane protein-like protein Bphy_0864 966008 - 964140 - | hypothetical protein Bphy_0865 966394 - 966005 - | GtrA family protein TERM 1086 966317 - 966299 - G 81 -13.8 -3.45027 | overlap 966297 ACGGCCGACGAAATA GCCCGCGC CGA GCGCGAGC ATGCCGTACAGCACG Bphy_0866 967374 - 966391 - | glycosyl transferase family protein TERM 1087 967627 - 967604 - R 100 -15.2 -5.70761 | opp_overlap 967604 AAAACAAAAGAAAAA GGCCCGGGCG TTTC CGTCCGGGCC TTCTGTTCTTCGAAT TERM 1088 967604 - 967627 + r 100 -17.4 -3.8372 | opp_overlap 967604 AAAACAAAAGAAAAA GGCCCGGGCG TTTC CGTCCGGGCC TTCTGTTCTTCGAAT Bphy_0867 968517 - 967768 - | DNA polymerase III, epsilon subunit Bphy_0868 969032 - 968586 - | ribonuclease H Bphy_0869 969844 - 969029 - | methyltransferase type 11 Bphy_0870 969864 - 970667 + | hydroxyacylglutathione hydrolase Bphy_0871 970823 - 972508 + | lytic transglycosylase catalytic TERM 1089 972561 - 972539 - f 75 -9.9 -3.80573 | gap 1 TCGAGGATGACCAAA CACGCG-TGC GGGG GCATCGCGTG AAGTGCGCTCCGATC Bphy_0872 972757 - 974001 + | major facilitator transporter TERM 1090 974419 - 974465 + F 70 -3.7 -4.66987 | gap 2, opp_overlap 974419, overlap 974420 974422 ACGGTCGGATAGACA GGTCGGCAACA-GGGTG-CTC GCCCAAG GAGTCTCCCGTGTTGCCGTCA TTTTCTTCCGCTCTG TERM 1091 975399 - 975383 - g 76 -9.4 -4.10161 | GATCACGTCGCAAAA CCACGG TTTCG CCGTGG ACGCCGACACGCTGC Bphy_0873 974454 - 975608 + | carbamoyl-phosphate synthase, small subunit Bphy_0874 975730 - 978984 + | carbamoyl-phosphate synthase, large subunit Bphy_0875 979137 - 979613 + | transcription elongation factor GreA TERM 1092 979849 - 979885 + G 74 -13 -3.25896 | gap 1, opp_overlap 979852, overlap 979847 979873 979874 979877 CGGCGCGGCGGTAAT GCATACCGGCG-TCTGC GCTG GCTGATCGCCGGCATGC TGTTGTGCGTGCTGG Bphy_0876 979633 - 980133 + | hypothetical protein Bphy_0877 980851 - 980288 - | hypothetical protein TERM 1093 980491 - 980515 + g 81 -13.6 -3.53343 | gap 1 CTTCCTCTGCGGCTT CGCGG-GCGCT GGGG AGCGCGCCGCG TTTCGCGGCCGGCTT TERM 1094 980522 - 980540 + g 74 -13.1 -3.28001 | overlap 980517 CGCGCCGCGTTTCGC GGCCGGC TTCAC GCCGGCC TTGGCTTTAGCCGTG TERM 1095 980968 - 980958 - H 74 -6.8 -4.37092 | ACTGCGGTTAGAAAA CTGC GGG GCAG AAAATACTGCGTACT Bphy_0878 981120 - 981782 + | ribosomal RNA methyltransferase RrmJ/FtsJ Bphy_0879 981969 - 983858 + | ATP-dependent metalloprotease FtsH TERM 1096 983880 - 983907 + F 100 -22.8 -4.63479 | opp_overlap 983872 983871 GTTAAAGGTGTTTTA CGGGCCGGTGTG ATTT CACACCGGCCCG TTTTCATTTCTAATG Bphy_0880 984031 - 984873 + | dihydropteroate synthase TERM 1097 985585 - 985561 - g 77 -13.5 -3.36273 | CGGCTTTAACATCAA CGACGGCGTCG GCG CGACGGCGCCG GATGCGCTGGTGCGC Bphy_0881 984902 - 986260 + | phosphoglucosamine mutase TERM 1098 986347 - 986319 - f 71 -13.2 -2.61997 | opp_overlap 986324, overlap 986324 TTCCAGACAGAAGAC GAAAAGGGCGGC TTCAT GCCGCCCTTTTT TTATGCCGCGTACCA TERM 1099 986324 - 986342 + F 100 -13.1 -5.60993 | opp_overlap 986319 986324 GACAGAAGACGAAAA GGGCGGC TTCAT GCCGCCC TTTTTTTATGCCGCG TERM 1100 986342 - 986324 - f 100 -13.1 -4.48263 | opp_overlap 986324, overlap 986319 GACAGAAGACGAAAA GGGCGGC TTCAT GCCGCCC TTTTTTTATGCCGCG Bphy_0882 986616 - 987647 + | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 1101 987695 - 987734 + F 86 -14.2 -3.29511 | gap 1, overlap 987699 TGACTTATTGGCTCG CGGCCGGCCGCCCGGCTTC GAT GAGGCCCGGCGGCCG-TAG TTCTGGCCGCGTGGC TERM 1102 987699 - 987731 + F 100 -22.7 -2.82742 | overlap 987695 TTATTGGCTCGCGGC CGGCCGCCCGGCTTC GAT GAGGCCCGGCGGCCG TAGTTCTGGCCGCGT Bphy_0883 987797 - 988795 + | phosphate ABC transporter, inner membrane subunit PstC Bphy_0884 988792 - 989688 + | phosphate ABC transporter, inner membrane subunit PstA TERM 1103 989743 - 989759 + G 86 -15.1 -3.53012 | opp_overlap 989724 AATCCCGTCGAGCGC CCGGCGG CAC CCGCCGG TTTCGACCCGGCGCA Bphy_0885 989704 - 990552 + | phosphate ABC transporter, ATPase subunit TERM 1104 990828 - 990801 - g 81 -17 -2.77701 | overlap 990796 AGTGCAGCAACATCA TCGCGCGTCGTC AGCC GACGGCGCGCGA CCTGCGCCTCGTGAT Bphy_0886 990587 - 991291 + | phosphate uptake regulator, PhoU Bphy_0887 991355 - 992056 + | two component transcriptional regulator TERM 1105 992116 - 992075 - f 100 -12.9 -4.69027 | opp_overlap 992077 992081, overlap 992077 AAACTGATCGAAAAA CACGAAGCGCGCTGCGGGC ACTC GGACGCAGCGCGCTTTGTT GTCTATGAAGTCTTC TERM 1106 992114 - 992077 - f 100 -15.5 -3.95214 | opp_overlap 992077 992081, overlap 992075 ACTGATCGAAAAACA CGAAGCGCGCTGCGGGC ACTC GGACGCAGCGCGCTTTG TTGTCTATGAAGTCT TERM 1107 992077 - 992114 + F 95 -17.7 -3.59966 | opp_overlap 992077 992075, overlap 992081 ACTGATCGAAAAACA CGAAGCGCGCTGCGGGC ACTC GGACGCAGCGCGCTTTG TTGTCTATGAAGTCT TERM 1108 992081 - 992110 + F 100 -14.9 -4.42974 | opp_overlap 992077 992075, overlap 992077 ATCGAAAAACACGAA GCGCGCTGCGGGC ACTC GGACGCAGCGCGC TTTGTTGTCTATGAA TERM 1109 992258 - 992241 - g 73 -5.5 -4.4261 | opp_overlap 992255, overlap 992235 992243 TCGTCAACACGAAAA CGGCG TTGGCGCT CGCCG TGCTCGCACTGCTCG Bphy_0888 992153 - 993466 + | multi-sensor signal transduction histidine kinase TERM 1110 993513 - 993524 + T 100 -7.2 -5.93252 | overlap 993480 993478 TTTTTGCCTGCGGCG CGGC GTTT GCCG TTTTTTGTTTTTCCG TERM 1111 993631 - 993618 - T 90 -4.5 -5.47218 | TGCCAGCGAAAAAAA CGACA CCAG CGTCG AGGACAAAGATCAAT Bphy_0889 995249 - 993642 - | Ppx/GppA phosphatase TERM 1112 997464 - 997481 + G 82 -5.5 -4.73613 | TCGCGGAATGCGCAG CTTAGCC TGTT GGCCAAG TTTTGTTCGTGATGG Bphy_0890 995430 - 997493 + | polyphosphate kinase TERM 1113 997565 - 997589 + T 78 -11.4 -3.75884 | overlap 997561 GTTTCTGGTTTGCTC GTGTTGCCCC TGTGC GGGGCGGCAC TTACTTTCTTTGCCG TERM 1114 997643 - 997625 - T 78 -6.6 -4.59212 | opp_overlap 997627, overlap 997627 AAGTAAGCAAAGAAA GCCGCTCA CAC CGAGCGTC TTGACGTTTACCCGC Bphy_0891 998787 - 997972 - | hypothetical protein TERM 1115 998017 - 998000 - G 72 -3.4 -4.63218 | gap 1, opp_overlap 998000 998004 GCGTCCCCAAGAAAA TGCCGCG CATAC CGCG-CA TTGATCTCCGACAAC Bphy_0892 999422 - 998964 - | putative phosphohistidine phosphatase, SixA TERM 1116 999598 - 999623 + r 100 -11.8 -4.96848 | opp_overlap 999598 GTGGAAAAACAAAAA CCCGCGACAC GCAAAG GTGACGCGGG TTTTTGTGTACGGCA TERM 1117 999623 - 999598 - R 100 -11.8 -5.61881 | opp_overlap 999598 GTGGAAAAACAAAAA CCCGCGACAC GCAAAG GTGACGCGGG TTTTTGTGTACGGCA Bphy_0893 999989 - 999831 - | hypothetical protein TERM 1118 1000263 - 1000288 + r 88 -15.5 -3.55444 | opp_overlap 1000252 1000222 GAAAGCCCACGCGCG CGAGCTTCGCC TTGC GGTGAAGCTCG TTTGGACAATCCGAA TERM 1119 1000325 - 1000306 - R 85 -15 -3.11291 | opp_overlap 1000306 1000318, overlap 1000298 TGGACAATCCGAATA TGCGCCGC GAGC GCGGCGCA TACGCATCAGTGTCT Bphy_0894 1000505 - 1000332 - | hypothetical protein Bphy_0895 1000673 - 1000846 + | lipoprotein Bphy_0896 1002254 - 1000872 - | MATE efflux family protein Bphy_0897 1002604 - 1002251 - | hypothetical protein TERM 1120 1002630 - 1002601 - G 81 -11.4 -4.05446 | opp_overlap 1002619 1002620 GGGCGTAACTATAAA CCATAGCCGACG GCGAGA CGTCGGCTGCGG GATCGCGGATCGACT TERM 1121 1002805 - 1002790 - R 85 -10.4 -4.2679 | opp_overlap 1002796 GAATCGCGACGAAAA GGTGCG TTGG CGCACC AAGTTTAATGATTGC TERM 1122 1003144 - 1003162 + r 100 -13.1 -5.626 | GCCGAACCCCCGTTT GCCCGGC CTCGT GCCGGGC TTTTTTTGTCCGCTC Bphy_0898 1003545 - 1003216 - | lipoprotein TERM 1123 1003503 - 1003481 - G 71 -13.5 -3.03124 | GCGCAGCCCGCAAGA CTCGCGATC CCAGC GATCGCGAG GCTCGCCGCCATCGC TERM 1124 1003614 - 1003595 - R 71 -10 -3.53012 | gap 1, opp_overlap 1003570 1003598 1003600, overlap 1003596 CGCGGTGCCGGTAAA CGCGGCACG GCG CGTGCC-CG CCCGTCTCTGTGATG Bphy_0899 1004456 - 1003734 - | peptidase M23B TERM 1125 1003822 - 1003837 + g 73 -6.1 -4.43189 | CGGTCGTTGTCCGAG TCGCC CATCTC GGCGA TTTTCTGACCTTGCT TERM 1126 1004424 - 1004440 + g 86 -2.9 -5.18726 | overlap 1004425 CGCGACCATCGCCCC GCAGACG AGC TGTCTGA TTTTTGTTGTCAACA Bphy_0900 1005490 - 1004573 - | aldose 1-epimerase TERM 1127 1005422 - 1005403 - G 77 -15 -2.78816 | opp_overlap 1005402 1005401, overlap 1005376 CGACGTCCCACGACA GCAGGCGG CCGC CCGCCTGC GGCGCGACGCGGAGC Bphy_0901 1005530 - 1005787 + | hypothetical protein TERM 1128 1005856 - 1005877 + F 100 -17.3 -5.01811 | CAGCCTCCGCACGCA GGCCCGCCT TCCA AGGCGGGCC TTTTTGCTTTCATGA TERM 1129 1006057 - 1006074 + G 81 -3.3 -5.02231 | TTCTTTCAAAAGGAC CGACGCG TGAG CCTGTCG TTTTTGATCTTTTTG TERM 1130 1006272 - 1006284 + G 70 -2.6 -4.62783 | overlap 1006271 1006270 TGCGCGCTGGATCGC GCTG ATAAG CGGC TTTTTCGCGTCGCTG Bphy_0902 1006000 - 1006893 + | undecaprenyl-diphosphatase TERM 1131 1006921 - 1006944 + T 81 -11.6 -3.82202 | opp_overlap 1006918, overlap 1006922 1006938 ATCGGTTATAATCCC GGGCCCGGCG TTGC TGCCGGGCCG TTCTGTTTGCGCATC TERM 1132 1006922 - 1006943 + T 84 -15.1 -2.88839 | opp_overlap 1006918, overlap 1006921 1006938 TCGGTTATAATCCCG GGCCCGGCG TTGC TGCCGGGCC GTTCTGTTTGCGCAT TERM 1133 1007232 - 1007215 - T 100 -12.7 -4.59376 | ATCAGCAAATGAAAA GGGCAGC CGAA GCTGCCC TGAAGCGTTGCGCAT Bphy_0903 1007610 - 1007365 - | hypothetical protein TERM 1134 1007444 - 1007410 - G 100 -13.6 -4.24745 | overlap 1007430 GATCAGCAACATAAA TGACGCGAGGAGGC AACTGAG GCCCGCTCGCGTCA GCACGCATGGCCAAC Bphy_0904 1007901 - 1008290 + | hypothetical protein TERM 1135 1008434 - 1008404 - g 80 -14.7 -3.15544 | GGGCAGGGTGAGGAA GGCGAAGCGCCGC AGGCG ACGGCGCTTCGCG AGATGGACGAGGAAA TERM 1136 1008474 - 1008491 + G 85 -4.8 -5.03994 | CGCTTGAGGCAGAGC GCCTGA AAGACC TCGGGC TTTTTGTATATCGAC Bphy_0905 1008287 - 1008745 + | NUDIX hydrolase Bphy_0906 1009685 - 1008771 - | extracellular solute-binding protein Bphy_0907 1011540 - 1009819 - | glutaminyl-tRNA synthetase Bphy_0908 1011949 - 1011596 - | hypothetical protein Bphy_0909 1012106 - 1012933 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1137 1013362 - 1013380 + G 70 -8.1 -4.053 | gap 1 CGAGCGCGGTCTGGC GCG-GCGC TCTC GCGCTCGC TTTCTGTGCGCTGGT Bphy_0910 1012923 - 1013891 + | putative transmembrane anti-sigma factor TERM 1138 1013980 - 1013922 - f 88 -16.9 -2.87931 | gap 2, opp_overlap 1013929 1013936 GCGACGGGCGATAGA GGGACGATTTAGGGGCGGCCGGGGCGC TTGCTGG GCGCCGCGGCCGCCCCTAAATCATT-- GAAAACACGCCCGAA TERM 1139 1013929 - 1013975 + F 100 -31 -2.70932 | opp_overlap 1013922, overlap 1013936 GCGATAGAGGGACGA TTTAGGGGCGGCCGGGGCGCTT GCT GGGCGCCGCGGCCGCCCCTAAA TCATTGAAAACACGC TERM 1140 1014004 - 1014014 + F 71 -6.8 -4.1891 | opp_overlap 1013989 GCCCGAATCGCGTCC GCAC TTC GTGC TTTATCTTGCAAACA TERM 1141 1014409 - 1014396 - g 73 -9.5 -3.82084 | overlap 1014404 1014405 CGTCAAGATGAAGAA GGCCG AAAC CGGCC CGTCGCCGATGATGA TERM 1142 1014472 - 1014454 - g 86 -10.2 -4.29073 | overlap 1014455 GAAGAAGCCAAGAAA GCGGCTGC AGC GCAGCCGA CGGAAGCGCAGGCTT TERM 1143 1014471 - 1014455 - g 76 -13.7 -3.16359 | overlap 1014454 AAGAAGCCAAGAAAG CGGCTGC AGC GCAGCCG ACGGAAGCGCAGGCT Bphy_0911 1014115 - 1014489 + | ribosomal protein S6 Bphy_0912 1014555 - 1014854 + | putative primosomal replication protein N, PriB TERM 1144 1014925 - 1014907 - g 72 -3 -4.71426 | overlap 1014909 TCGTCAGCAACAAAA CCCGCTCT TCA AGCGCAAG AAGTTCTGCCGCTTC Bphy_0913 1014857 - 1015132 + | ribosomal protein S18 TERM 1145 1015276 - 1015264 - g 91 -6.9 -5.07486 | GATCCCGAACAAAAA GGCAC GAC GCGCC ACGAAGGAAGCCATC Bphy_0914 1015160 - 1015612 + | ribosomal protein L9 TERM 1146 1015691 - 1015662 - f 85 -14.9 -3.14132 | opp_overlap 1015663 GGTTCTGGCGATGAA GGGCAGGGGCCGG GAAA CCGGCCTCTGCCT TTTTTGTTCTGCGCC TERM 1147 1015663 - 1015690 + F 100 -20.6 -5.55769 | opp_overlap 1015662 GTTCTGGCGATGAAG GGCAGGGGCCGG GAAA CCGGCCTCTGCC TTTTTTGTTCTGCGC Bphy_0915 1015784 - 1017172 + | replicative DNA helicase TERM 1148 1017242 - 1017231 - f 76 -7.2 -4.42386 | overlap 1017233 CGCGCACGCACAAAA CGCG GGCG CGCG CGTCACCCGGAACGG Bphy_0916 1017321 - 1017947 + | hypothetical protein TERM 1149 1018919 - 1018948 + G 78 -13.5 -3.51232 | gap 1, overlap 1018925 GCATCCGCCGTATTA GCGGCGGCCG-GCT GGT GGCTCGGCCACCGC TTCCTTTAAGCCGCG Bphy_0917 1017947 - 1018957 + | phosphate transporter TERM 1150 1018996 - 1018969 - T 87 -16.3 -2.88579 | overlap 1018988 TTAAGCCGCGATACA GCACGCCGCCG TCAGAT CAGCGGCGTGC TGCCTCCATCCATCG Bphy_0918 1019786 - 1018980 - | short-chain dehydrogenase/reductase SDR TERM 1151 1019074 - 1019060 - G 75 -3.4 -4.83615 | opp_overlap 1019039 1019036, overlap 1019061 GACTCGCCAGAAAAA GCGCGA CGT CCGCGA TTTCCTCCGGTTTCG TERM 1152 1019501 - 1019515 + g 72 -12.8 -3.14229 | overlap 1019500 CGGGATCGTAGCGAC GCGCGG CGC CCGCGC TGTTGATGAGGATGT Bphy_0919 1021076 - 1019928 - | NLP/P60 protein TERM 1153 1021303 - 1021277 - R 100 -15.8 -4.72272 | GGCGCGCATGAAAAA GCCGCTGCCGGC GTC ACCGGAAGCGGC CTGGAACAGCGCAAA Bphy_0920 1023147 - 1021327 - | PhoH family protein TERM 1154 1023363 - 1023334 - R 100 -19.3 -5.26875 | gap 1, opp_overlap 1023329 CGCGCAATTAAAAAA GCCGC-CGCCCCGG CAA CCGGGGCAAGCGGC TCGACTTCGGTCATC Bphy_0921 1023974 - 1023513 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1155 1023996 - 1024028 + r 100 -11.2 -5.08088 | gap 1, overlap 1024022 CTCCGGTTGTTATGG GTGCCGGCG-GCGGC GTGG GCCGCGCGCCTGAAC TTTTTCTTCGGGGTT Bphy_0922 1025097 - 1024201 - | polysaccharide deacetylase Bphy_0923 1026156 - 1025110 - | NAD-dependent epimerase/dehydratase TERM 1156 1026038 - 1026050 + g 71 -9.1 -3.71873 | TGTTTCACGAGGTCG CCGAG GCG CTCGG TTTGCATGTCCATCC Bphy_0924 1027088 - 1026153 - | formyl transferase domain-containing protein Bphy_0925 1028134 - 1027085 - | glycosyl transferase family protein Bphy_0926 1029304 - 1028153 - | DegT/DnrJ/EryC1/StrS aminotransferase Bphy_0927 1029986 - 1029561 - | hypothetical protein Bphy_0928 1031763 - 1029961 - | glycosyl transferase family protein TERM 1157 1030846 - 1030829 - G 70 -7.7 -3.96696 | AACAGGAAGATGAAA GCTGTCC ACAC GAACAGC AGCGTGACGGGCGCG TERM 1158 1030874 - 1030903 + g 71 -14.3 -2.73124 | gap 1, overlap 1030875 GCGAAGCCGTTCGCC TGACGCGGCATGCG CAG CGCGTGCCGCG-CG CTTTGCACCGTCACC TERM 1159 1030875 - 1030904 + g 75 -12.1 -3.55444 | gap 1, overlap 1030874 CGAAGCCGTTCGCCT G-ACGCGGCATGCG CAG CGCGTGCCGCGCGC TTTGCACCGTCACCG TERM 1160 1031783 - 1031802 + r 70 -4.8 -4.4846 | overlap 1031786 GTTTCAACCTTTTTC GACGCCGC TGTC GCGGCTAC TTTCTTATTCCGTTC TERM 1161 1031983 - 1032003 + r 83 -14 -3.33696 | CCTTAGGGCGATCAT GGCTGCGG GCTGG CCGCAGCC TTCATTCGCCGGCAC Bphy_0929 1032562 - 1032158 - | hypothetical protein Bphy_0930 1033030 - 1034277 + | aminotransferase class I and II Bphy_0931 1034336 - 1035667 + | homoserine dehydrogenase TERM 1162 1036585 - 1036567 - g 81 -11 -4.18018 | CTTGCCGATTGAAAA GCTGGTCG TCG CGACCAAC GAGAACGACGTGCTC Bphy_0932 1035698 - 1037146 + | threonine synthase TERM 1163 1037154 - 1037170 + F 87 -7.9 -4.86862 | overlap 1037156 1037157 CGCGTTGATTTTTGT CTGCGAC GCG GTCGCCG TTTTGGTTTTTTGCG TERM 1164 1037300 - 1037285 - f 87 -8.2 -4.7373 | overlap 1037286 GGATGCCAGCAAAAA CCGCCG CTGC CGGCGA AGACACAAAAACGAG TERM 1165 1037342 - 1037312 - f 100 -10.2 -5.10064 | overlap 1037317 1037319 GCGAAGACACAAAAA CGAGAGACCGCGCG CAC CGCGCAGGCGCACG AAAACCCGAAACCGC TERM 1166 1037981 - 1038003 + G 71 -4 -4.56597 | opp_overlap 1037995, overlap 1037983 CACATCTCGAAGTCG TGCGGCGGGT GAA AGTCGCCGTG TTTTTCACGGGCGAC TERM 1167 1038405 - 1038423 + G 72 -8.8 -4.07455 | overlap 1038389 TCTGCCGGGCAACCC CGTGTCGA CGT TCGTCACG TTTCTGCTGTTCGTG Bphy_0933 1037419 - 1038714 + | molybdenum cofactor synthesis domain-containing protein TERM 1168 1038997 - 1039008 + G 81 -3.6 -5.0133 | overlap 1038993 CGTATCACCGACGGC TGCG AAGT CGCG TTTTTTCCGCCCGTG Bphy_0934 1038778 - 1039035 + | molybdopterin converting factor, subunit 1 Bphy_0935 1039068 - 1039544 + | molybdopterin biosynthesis MoaE protein TERM 1169 1039574 - 1039546 - T 84 -12.7 -3.74747 | CGAAGGCGGATTAAA GTTATTCGTTGAA CGC TTCAACAAATAAC GGCGGCTCTATTATC Bphy_0936 1040210 - 1039653 - | globin TERM 1170 1040803 - 1040813 + G 77 -4.6 -4.66609 | opp_overlap 1040788, overlap 1040769 1040796 GCATCCTCGAATCGG CGCG CGA TGCG TTTTTCCGTGAACTC Bphy_0937 1040418 - 1040945 + | transcriptional regulator, TrmB TERM 1171 1042631 - 1042602 - g 76 -9.2 -4.16842 | overlap 1042603 1042621 CGGACCTGGAAGAAA TCTGGACGGCGG AAAAAG CCGCCGTGCAGG GCAGTGCGCAGCTGA TERM 1172 1042630 - 1042603 - g 72 -12.7 -3.09784 | overlap 1042602 1042621 GGACCTGGAAGAAAT CTGGACGGCGG AAAAAG CCGCCGTGCAG GGCAGTGCGCAGCTG Bphy_0938 1041221 - 1043818 + | ATP-dependent chaperone ClpB TERM 1173 1043904 - 1043871 - T 85 -15.5 -3.14848 | opp_overlap 1043876, overlap 1043876 GTTCCGGATGAAAAG CAAAAGGGCAACGAA GCGA TTCGTTGCCCTTTTT TTCACGCACGGCGTT TERM 1174 1043876 - 1043899 + T 100 -15.4 -5.40072 | opp_overlap 1043871 1043876 GGATGAAAAGCAAAA GGGCAACGAA GCGA TTCGTTGCCC TTTTTTTCACGCACG TERM 1175 1043899 - 1043876 - T 100 -15.4 -4.70319 | opp_overlap 1043876, overlap 1043871 GGATGAAAAGCAAAA GGGCAACGAA GCGA TTCGTTGCCC TTTTTTTCACGCACG TERM 1176 1044033 - 1043980 - T 71 -10.1 -3.53012 | gap 1, overlap 1043982 1043983 GTTCTTGTTGCCAAA CATGCCCGCGATCTGTCCGAGCGCGC CCA GCGCAC-CGGACAGGCCGCCTGCGTC GACCTGCCCATTGGC TERM 1177 1044031 - 1043982 - T 79 -12.7 -3.34398 | gap 1, overlap 1043980 1043983 TCTTGTTGCCAAACA TGCCCGCGATCTGTCCGAGCGCGC CCA GCGCAC-CGGACAGGCCGCCTGCG TCGACCTGCCCATTG TERM 1178 1044030 - 1043983 - T 84 -16.2 -2.60496 | gap 1, overlap 1043982 1043980 CTTGTTGCCAAACAT GCCCGCGATCTGTCCGAGCGCGC CCA GCGCAC-CGGACAGGCCGCCTGC GTCGACCTGCCCATT Bphy_0939 1044402 - 1043959 - | hypothetical protein TERM 1179 1044482 - 1044464 - R 93 -13.8 -3.93288 | overlap 1044465 CGGCAGGGAACGAAA CGCCGCGC GAA GCGCGGCA CCGATGATCGTGAGG TERM 1180 1044481 - 1044465 - R 84 -15.1 -2.95652 | overlap 1044464 GGCAGGGAACGAAAC GCCGCGC GAA GCGCGGC ACCGATGATCGTGAG Bphy_0940 1045094 - 1044534 - | putative DNA uptake protein, ComEA-like protein TERM 1181 1044637 - 1044670 + g 70 -11.7 -3.42069 | gap 1, overlap 1044635 1044643 1044644 GATGGCGCAGTAGCA GCGGGCGCCGATGCGG CAG CCGCGTCGGT-CTTGC TCTTCTTGGACTTCG TERM 1182 1044643 - 1044666 + g 72 -11 -3.46509 | gap 1, overlap 1044637 1044635 1044644 GCAGTAGCAGCGGGC G-CCGATGCGG CAG CCGCGTCGGTC TTGCTCTTCTTGGAC TERM 1183 1044644 - 1044664 + g 83 -14.7 -3.29958 | overlap 1044643 1044637 1044635 CAGTAGCAGCGGGCG CCGATGCGG CAG CCGCGTCGG TCTTGCTCTTCTTGG TERM 1184 1044697 - 1044744 + g 77 -8.4 -4.2231 | gap 1, overlap 1044692 TTCGATGCTTTCGCG CCCGATGC-GGCGTCGGCGGA TGTGGTT TGCGTCGTCGTTTGCATCGGG TTTTGCGTCGTGGTT Bphy_0941 1047677 - 1045320 - | penicillin-binding protein 1C TERM 1185 1046061 - 1046049 - G 80 -4.7 -4.83615 | CACTGCCGAGAAAAA GCGCG TCG CGAGC GGGCTGTCGAAGCCG TERM 1186 1047615 - 1047590 - G 76 -6.1 -4.51238 | gap 1, overlap 1047593 CCCATAAAATACAAA GCACGATGCGCA CGA TGCGCA-CGAAC GCAACGAACCCGCGC Bphy_0942 1053754 - 1047692 - | alpha-2-macroglobulin domain-containing protein TERM 1187 1049237 - 1049257 + g 76 -13.9 -3.06183 | opp_overlap 1049230 CAACGATACCGCGAT GCCGCCGCG CAG CGCGCCGGC TTGCGTCGCGGTCGC TERM 1188 1049358 - 1049374 + g 77 -12.3 -3.66999 | ATGGGGATGGCGGCC GTCACGC GTT GCGTGAC TTTGAGTGCGTCGCT TERM 1189 1049481 - 1049520 + g 88 -14.2 -3.85698 | gap 1, overlap 1049483 GGCGGCGCGACGTTC CAGGCGACTTCGCGTGCCG AAT CGGC-CGCGACGTCGACCG TTTGTGCCGGCAGCG TERM 1190 1049483 - 1049519 + g 77 -15.2 -2.91276 | overlap 1049481 CGGCGCGACGTTCCA GG-CGACTTCGCGTGCCG AAT CGGC-CGCGACGTCGACC GTTTGTGCCGGCAGC TERM 1191 1051076 - 1051099 + g 75 -12.4 -3.44325 | CGTGAGGCTGCCCGC GCCGTTGCGC TCGA GCGTGACGGC TTCCTTGTCGGCGAT TERM 1192 1052065 - 1052085 + g 71 -12.6 -3.23572 | overlap 1052063 GCTGGCCCTTGTCGA GCGTCGTG ACCCA CACGACGC TGTTCTCGCGTCCCT TERM 1193 1053175 - 1053200 + g 74 -5.3 -4.57073 | overlap 1053176 1053177 GCAGACGCTTCAGCA GTTCGGTGCGC GTTT GCGCATCGACG TTTTTCACGGGAATG TERM 1194 1053706 - 1053692 - G 75 -3.4 -4.72986 | opp_overlap 1053698, overlap 1053694 GAGCGTGATGAAAAA GCCGAG TAT CGCAGC CGCTGCGGCTGCCGC TERM 1195 1054111 - 1054092 - g 72 -11.4 -3.53811 | GTGATGCGCCTGAAA GCGACGGG GATG CCCATCGC GGGCATGCAAGCGTT Bphy_0943 1053918 - 1054334 + | MerR family transcriptional regulator Bphy_0944 1054331 - 1054729 + | carboxymuconolactone decarboxylase TERM 1196 1054861 - 1054871 + T 72 -4.6 -4.66833 | opp_overlap 1054852, overlap 1054860 AAGTGAGAGAGCCTC GTGG ATC CCGC TTTTTCCGCTTGCGC TERM 1197 1054879 - 1054893 + T 72 -5.6 -4.49958 | overlap 1054877 1054876 GATCCCGCTTTTTCC GCTTGC GCG GCGGGC TTTCTTTGCTGGCAT Bphy_0945 1056375 - 1055014 - | MATE efflux family protein Bphy_0946 1058135 - 1056378 - | putative inner membrane protein TERM 1198 1058344 - 1058361 + r 100 -12.7 -4.68994 | opp_overlap 1058344 TCCGCCGACAAAAAA GGGCAGC TCGC GCTGCCC TTTTTGCATCGTAAT TERM 1199 1058361 - 1058344 - R 100 -12.7 -5.24129 | opp_overlap 1058344 TCCGCCGACAAAAAA GGGCAGC TCGC GCTGCCC TTTTTGCATCGTAAT Bphy_0947 1058673 - 1058410 - | ribosomal protein L31 Bphy_0948 1059686 - 1058844 - | hypothetical protein TERM 1200 1059849 - 1059820 - R 100 -15.1 -4.09864 | opp_overlap 1059826, overlap 1059826 ACGCAGCGCGTAAAA GAAAAACGCCTGC GCAG GCAGGCGTTTTGC GGATGAAACGTAGGG TERM 1201 1059826 - 1059843 + r 93 -12.7 -4.11216 | opp_overlap 1059826 1059820 CGCGTAAAAGAAAAA CGCCTGC GCAG GCAGGCG TTTTGCGGATGAAAC TERM 1202 1059843 - 1059826 - R 100 -12.7 -5.45802 | opp_overlap 1059826, overlap 1059820 CGCGTAAAAGAAAAA CGCCTGC GCAG GCAGGCG TTTTGCGGATGAAAC Bphy_0949 1061132 - 1059870 - | transcription termination factor Rho TERM 1203 1060376 - 1060386 + g 72 -8.2 -4.18762 | TCTTCATTTCGACGA GGCG TTT CGCC TTTTCGATCACCATT TERM 1204 1061211 - 1061223 + r 78 -7.7 -4.49337 | GCTCAAGGACATACT CGTCT TTT AGACG TTTTATGGATTCTAG TERM 1205 1061272 - 1061256 - R 71 -7.2 -4.17657 | opp_overlap 1061256 1061262 TAGCACACGCCAAAA CCAGCC TGCGC GGCCGG TTCGTGTCGGCGCAT Bphy_0950 1061747 - 1061421 - | thioredoxin TERM 1206 1063064 - 1063045 - g 75 -4.3 -4.63218 | gap 1, overlap 1063047 1063048 1063058 TCTCGGCGAAGAAAA CATTGCGC ATGAA GCGCAA-G CGCTGCGCCTGCTCG TERM 1207 1064208 - 1064163 - g 77 -10.9 -3.78775 | gap 1, opp_overlap 1064176 CTGCGCAGCAGGAAA GCGCCGCGCG-CGCGCCGACGC CTC GCGCCGCAGAGCCGCAGGGCGC GTCGGCTGTTCCGCC TERM 1208 1064759 - 1064792 + G 76 -13.9 -3.17212 | gap 1 GTGCAGTCCCTGATC CGCGAGTTCGGCGCGA GCA TCGTGCCGGGCTC-CG TTCGTCCGCTGATGC Bphy_0951 1062461 - 1064842 + | DNA polymerase III, subunits gamma and tau Bphy_0952 1064920 - 1065246 + | hypothetical protein TERM 1209 1065255 - 1065298 + F 82 -13.3 -3.21099 | gap 2 GTTTTAATCGCGCAG CGTTGTGACGCGCGGTGCATG ACTG CATGC-CCGCGCGTTG-GACG TTCATCGTCGAACGG TERM 1210 1065536 - 1065505 - g 71 -8 -4.09739 | GGAAGGCGCGGAAAA GCTCGGCCGC TCGCTGCTGTTC GCGACCGAGC ATCTGCAGCACTGCG Bphy_0953 1065380 - 1065976 + | recombination protein RecR TERM 1211 1066160 - 1066180 + G 79 -11.1 -3.86822 | CTCGGCACGCTGATC GCGGGCC CGTTCGC GGCCCGC TTTCTCGGCGAGTTC Bphy_0954 1066040 - 1067305 + | L-carnitine dehydratase/bile acid-inducible protein F Bphy_0955 1067389 - 1068426 + | NMT1/THI5-like domain-containing protein TERM 1212 1069022 - 1069012 - g 72 -6.8 -4.21275 | opp_overlap 1069011 CCAACTGATGGAAAA CGAG CTG CTCG ATCTGTGGGCGGCGA Bphy_0956 1068473 - 1069297 + | ABC transporter related Bphy_0957 1069299 - 1070123 + | binding-protein-dependent transport systems inner membrane component TERM 1213 1070178 - 1070148 - T 100 -24.8 -4.15222 | opp_overlap 1070148 ATGGCGGGTAACAAA CGGCGCGTGGCCTC GCT AAGGCCACGCGCCG TTTTGCTTTTCGGGG TERM 1214 1070148 - 1070178 + T 100 -24.1 -4.67038 | opp_overlap 1070148 ATGGCGGGTAACAAA CGGCGCGTGGCCT CGCTA AGGCCACGCGCCG TTTTGCTTTTCGGGG Bphy_0958 1071179 - 1070205 - | alcohol dehydrogenase TERM 1215 1071226 - 1071244 + H 84 -13.2 -3.70902 | ACATCACGGGTTCAT GCACGCTT CAC AAGCGTGC TTTCGATCTGCAGGC Bphy_0959 1071447 - 1072205 + | stationary-phase survival protein SurE TERM 1216 1072386 - 1072328 - g 71 -9.4 -3.70902 | gap 1, opp_overlap 1072298, overlap 1072329 CCGGTCACATCGAAA CCGGCCGGTTCGTCCACGCGGGCG-CC TGTCGT GGTCACACCCGTGGTCAAACCGGTCGT CAAAAGCGCCGTTAC TERM 1217 1072457 - 1072408 - g 88 -2.3 -5.24129 | gap 3, overlap 1072434 1072456 CGCCGTTACAAAAAA CG-CGTC-CGGAATCGTCAATACG AAAAG CGCATCCACGAT-CCGCAACGACG GCGCGCGCAACCAGT TERM 1218 1072450 - 1072434 - g 75 -6.5 -4.4261 | overlap 1072408 TCGTCAATACGAAAA GCGCATC CAC GATCCGC AACGACGGCGCGCGC TERM 1219 1073136 - 1073150 + G 85 -4.9 -4.99645 | overlap 1073127 CGCAGTGGCGCGAAT CGCGG CTTGA TCGCG TTTTCTTTGTCCCCT Bphy_0960 1072202 - 1073185 + | protein-L-isoaspartate O-methyltransferase TERM 1220 1074041 - 1074026 - g 70 -4.7 -4.4017 | CCAAGGGGCAGAAAA TTGCC GAAATG GGCAA CAGTGATTCGGACCG Bphy_0961 1073191 - 1074129 + | peptidase M23B TERM 1221 1074308 - 1074277 - g 80 -14.4 -3.42013 | gap 1, overlap 1074271 1074263 ACTCGACAACAGCAA CGACGCCG-ACGAGC GCG GCTCGCGCGGCGACG AGGAACCGGATTCGC Bphy_0962 1074146 - 1075240 + | RNA polymerase, sigma 38 subunit, RpoS TERM 1222 1075359 - 1075389 + G 73 -6 -4.37886 | opp_overlap 1075343 1075344 1075378 TGGCCGAGCACGCGT TCGCGGCTCGGC GCGAGAA GACGGGCAGCGA TTTTCTGCCGCATCA Bphy_0963 1075247 - 1076023 + | 3'-5' exonuclease TERM 1223 1076191 - 1076160 - T 93 -5.2 -5.36441 | gap 1 GTCGCAGACAAAAAA CATCAACCGATC-TC GAC GATGACAGGCTGATG ATCCGAAGCCCGCGT Bphy_0964 1077025 - 1076162 - | endonuclease/exonuclease/phosphatase TERM 1224 1077166 - 1077140 - g 79 -10.1 -4.13014 | overlap 1077157 1077162 CCCACATTGGTAAAA CCCGCTCGCCC AGAAA AGGCAAGCAGG CGCGCGAAGACGCCG TERM 1225 1077187 - 1077157 - g 70 -4.6 -4.36914 | gap 1, overlap 1077140 1077162 CGCTCGCCCAGAAAA GGCAAGCAGGCGC GCGAAG ACGCC-GCCGGCC CGTTCAAGGCGCCCG Bphy_0965 1077109 - 1078530 + | RNA methyltransferase TERM 1226 1078618 - 1078585 - T 100 -24.1 -3.53091 | opp_overlap 1078585 1078588 1078591, overlap 1078588 1078591 AGCGGGCGCCGCAAA GAACAACGCCACGGT CGGC ACCGTGGCGTTGTTC TTTGATGAAGAGCGA TERM 1227 1078585 - 1078618 + T 100 -24.1 -3.72576 | opp_overlap 1078585 1078588 1078591, overlap 1078588 1078591 AGCGGGCGCCGCAAA GAACAACGCCACGGT CGGC ACCGTGGCGTTGTTC TTTGATGAAGAGCGA TERM 1228 1078588 - 1078615 + T 100 -20 -4.00042 | opp_overlap 1078585 1078588 1078591, overlap 1078585 1078591 GGGCGCCGCAAAGAA CAACGCCACGGT CGGC ACCGTGGCGTTG TTCTTTGATGAAGAG TERM 1229 1078615 - 1078588 - T 100 -20 -3.90744 | opp_overlap 1078588 1078585 1078591, overlap 1078585 1078591 GGGCGCCGCAAAGAA CAACGCCACGGT CGGC ACCGTGGCGTTG TTCTTTGATGAAGAG TERM 1230 1078591 - 1078612 + T 100 -15.9 -4.12603 | opp_overlap 1078588 1078585 1078591, overlap 1078588 1078585 CGCCGCAAAGAACAA CGCCACGGT CGGC ACCGTGGCG TTGTTCTTTGATGAA TERM 1231 1078612 - 1078591 - T 100 -15.9 -4.08557 | opp_overlap 1078591 1078588 1078585, overlap 1078588 1078585 CGCCGCAAAGAACAA CGCCACGGT CGGC ACCGTGGCG TTGTTCTTTGATGAA Bphy_0966 1079499 - 1078642 - | putative competence lipoprotein, ComL TERM 1232 1079349 - 1079363 + g 81 -3.4 -5.00616 | overlap 1079341 1079350 TATTGTTGGTCCAGG TGGCCG TTT CGTCCG TTTTTTCCGGCAGGC Bphy_0967 1079539 - 1080849 + | RluA family pseudouridine synthase TERM 1233 1081531 - 1081543 + G 70 -4.7 -4.4261 | ACCTCGCCGATCTGC CGCGC CTC GCACG TTTTCGTCTTGCGCA Bphy_0968 1080846 - 1081685 + | hypothetical protein TERM 1234 1081968 - 1081954 - f 89 -2 -5.68023 | overlap 1081956 CGATAATGAAAAAAA TATCGC ACT GCGGCA AAATCGGGAGCAAGC Bphy_0969 1082120 - 1084108 + | poly(R)-hydroxyalkanoic acid synthase, class I Bphy_0970 1084301 - 1085482 + | acetyl-CoA acetyltransferase TERM 1235 1086271 - 1086260 - g 82 -4.4 -5.00884 | overlap 1086261 ACGTGCTGGAAAAAA TCGT CGCG ACGA TTCCGGTGCGCCGTC Bphy_0971 1085656 - 1086396 + | acetoacetyl-CoA reductase TERM 1236 1086461 - 1086511 + F 100 -16.1 -3.93638 | opp_overlap 1086507, overlap 1086462 1086507 TGGTTCAGATGTTTC TGGCGGCGTCTTGCACGCGCAGC GTCAA GCTGTGCGTGCGACAGGACGCCG TTTCTGCGCTTCATT TERM 1237 1086462 - 1086510 + F 90 -17.4 -2.95459 | opp_overlap 1086507, overlap 1086461 1086507 GGTTCAGATGTTTCT GGCGGCGTCTTGCACGCGCAGC GTCAA GCTGTGCGTGCGACAGGACGCC GTTTCTGCGCTTCAT Bphy_0972 1086545 - 1087123 + | polyhydroxyalkonate synthesis repressor, PhaR Bphy_0973 1087506 - 1088897 + | MiaB-like tRNA modifying enzyme YliG Bphy_0974 1088902 - 1089840 + | ribokinase-like domain-containing protein TERM 1238 1089981 - 1089950 - f 86 -14.4 -3.28497 | overlap 1089945 1089952 GTAGTGCAAAGGCAA GATCACACGCGGCG GCAA CGCCGCGCGCGATA TCCAACTGAGACAAA TERM 1239 1089979 - 1089952 - f 90 -17 -3.20617 | overlap 1089950 1089945 AGTGCAAAGGCAAGA TCACACGCGGCG GCAA CGCCGCGCGCGA TATCCAACTGAGACA TERM 1240 1090534 - 1090503 - g 79 -10.2 -4.09685 | gap 1, overlap 1090515 1090518 1090523 CGTGACGGCCGAAAA CGTCGCG-AAGAAGT ACG ACATCTCGCGCGACG CGCAAGACGCACTCG TERM 1241 1090833 - 1090815 - g 71 -7.3 -4.07885 | overlap 1090827 CAGCGTCGCCGAAAA GCGCGGC ATGAA GCCGCTC GGCAGGCTGGTCGCT Bphy_0975 1090012 - 1091196 + | acetyl-CoA acetyltransferase Bphy_0976 1091352 - 1091960 + | hypothetical protein TERM 1242 1092069 - 1092081 + G 71 -4.1 -4.53303 | CGATCAGATGACACC CGGTT GGG AATCG TTTTCTGTGCCCGTG Bphy_0977 1092001 - 1093185 + | cystathionine beta-lyase TERM 1243 1093219 - 1093240 + T 100 -17.3 -4.64766 | opp_overlap 1093219 AAGCACGAACAACAA GCCCGCTCG ATAT CGAGCGGGC TTTTTCACCTGTGCC TERM 1244 1093240 - 1093219 - T 100 -17.3 -4.01047 | opp_overlap 1093219 AAGCACGAACAACAA GCCCGCTCG ATAT CGAGCGGGC TTTTTCACCTGTGCC Bphy_0978 1094112 - 1093273 - | phosphoserine phosphatase SerB TERM 1245 1095385 - 1095429 + G 77 -11.4 -3.70149 | gap 1 GCGGGTCTGTCGCTT GCGCGGCTCGAAGCG-CGGAT TGCA ATCGGGCGTTTCGTGCGGCGC TTTCCGTCATATCGG Bphy_0979 1094296 - 1095519 + | cytochrome P450 TERM 1246 1095536 - 1095552 + F 72 -4.4 -4.56597 | gap 1, opp_overlap 1095523, overlap 1095531 1095525 AGCGTACGAACGCAT GCT-CGG GCGT CCGTAGC TTTTTCCGCAGAGAA TERM 1247 1095608 - 1095652 + F 75 -12.2 -3.27774 | opp_overlap 1095573 GCGCTGCCGCACACC GCATGCGCGA-CGTGCGTGGCG ACG CGCCACG-ACGCTTGGGCACGC TTGGTGCTTCGCATG TERM 1248 1096601 - 1096570 - g 75 -12.3 -3.53012 | overlap 1096591 1096595 GCCGCGCCCGCGAAA CGTCGCGCGGC AGCGAAGAAA GCCACGCGACG CACGACCGGGACGGC Bphy_0980 1095703 - 1096677 + | Ku protein Bphy_0981 1096745 - 1099609 + | DNA ligase D Bphy_0982 1099684 - 1099998 + | hypothetical protein Bphy_0983 1100990 - 1100016 - | LysR family transcriptional regulator Bphy_0984 1101155 - 1102171 + | zinc-binding alcohol dehydrogenase family protein TERM 1249 1102307 - 1102290 - f 77 -2.7 -5.15167 | gap 1, overlap 1102305 1102306 CATCAGGAAGAAAAA CCGCTGTG AGG CA-AACGG CGCGATCGGCGACAA TERM 1250 1102621 - 1102601 - g 71 -8.1 -4.11394 | ACTTCACGTGGAAAA CCGTGCCGC CCG GCGGCCCCG TCGCCGTCGACAGCG Bphy_0985 1102369 - 1102929 + | hypothetical protein Bphy_0986 1103822 - 1103016 - | hypothetical protein Bphy_0987 1104559 - 1103819 - | ABC transporter related TERM 1251 1104194 - 1104138 - G 75 -6.5 -4.43501 | gap 3, overlap 1104139 1104191 AATCGATCGAGAAAA TCGCTT-GAGCG-GCCCGC-CTGCGACG CGAG CGCCGCCGCGCGCGCGCGATCGAAGCGC ACGTCGCGATACGCA TERM 1252 1106046 - 1106030 - g 100 -11.5 -5.1356 | CGCGAGCAAGAAAAA GCGCGGC GAC ACCGCGC GCCAGCCATCGAACA Bphy_0988 1104678 - 1107110 + | AsmA family protein TERM 1253 1107211 - 1107180 - T 100 -22.4 -4.08692 | gap 1, opp_overlap 1107181, overlap 1107181 GAACCGCCCGCAAAA GCGCCACGGCCGCGA ATC TCGCGGCCGTGGC-C GTGTCTCTGCGTGAA TERM 1254 1107181 - 1107212 + T 100 -22.4 -3.0094 | gap 1, opp_overlap 1107180 1107181 AACCGCCCGCAAAAG C-GCCACGGCCGCGA ATC TCGCGGCCGTGGCCG TGTCTCTGCGTGAAC TERM 1255 1107211 - 1107181 - T 100 -22.6 -3.04894 | opp_overlap 1107181, overlap 1107180 AACCGCCCGCAAAAG CGCCACGGCCGCGA ATC TCGCGGCCGTGGCC GTGTCTCTGCGTGAA Bphy_0989 1107747 - 1107250 - | hypothetical protein TERM 1256 1107674 - 1107685 + g 79 -7.2 -4.56597 | overlap 1107673 TCGCCGTCCACCTTC GCGC GCCT GCGC TTTTTCGGGAAGGAC TERM 1257 1107996 - 1107951 - H 87 -4 -5.42259 | opp_overlap 1107961 1107962 GGACCCGTAAAAAAA GACATTTTTATGTGCGCCAG CACCTT CTCGCGCGCATTGAAATATC CGTTGCACCCGTCGA TERM 1258 1108041 - 1108016 - H 71 -12.5 -2.57564 | gap 1, overlap 1108015 GCACCCGTCGATAAT GGCCGCGTC-CC AGC GGCGGCGCGGCC TTCGACGCGTACGCG TERM 1259 1108933 - 1108899 - g 71 -12.1 -3.28712 | gap 1, overlap 1108900 CGTGCTGGCGGACAA TGCGCAGCGGCTCGCC GACG GGC-AGCCGCTGCCCG CGCCGCTGGCGGGCA TERM 1260 1108932 - 1108900 - g 77 -15.6 -2.57132 | gap 1, overlap 1108899 GTGCTGGCGGACAAT GCGCAGCGGCTCGCC GACG GGC-AGCCGCTGCCC GCGCCGCTGGCGGGC TERM 1261 1108978 - 1108958 - g 75 -10.3 -3.84246 | overlap 1108959 CGGGCAACGATGAAA TCGCGGCGC TCG ACGCCGCGC TGCATCGCACGAGCG TERM 1262 1108977 - 1108959 - g 73 -13.8 -2.90227 | overlap 1108958 GGGCAACGATGAAAT CGCGGCGC TCG ACGCCGCG CTGCATCGCACGAGC Bphy_0990 1108222 - 1109865 + | integral membrane sensor signal transduction histidine kinase TERM 1263 1110456 - 1110473 + G 78 -4 -4.72986 | overlap 1110452 GATGCGTTTATCGAG GCCGTG CGGCGT CTCGGC TTTTTCCTGCAGGTC Bphy_0991 1110039 - 1110527 + | response regulator receiver protein TERM 1264 1110802 - 1110823 + G 79 -2.1 -5.02476 | gap 1, overlap 1110803 1110805 TCGACTACCAGCTCG ACG-GCGCCG AGA CGGGGCTCGA TTTTTTCCGGCGTCT Bphy_0992 1110609 - 1112600 + | PAS/PAC sensor hybrid histidine kinase Bphy_0993 1113157 - 1112708 - | large conductance mechanosensitive channel protein TERM 1265 1112784 - 1112816 + g 77 -11.2 -3.73534 | gap 1 GGCGTGGGCGGCGGG GCGGC-CGCTTCGGC GGGT GCCGGGGCGCGCAGC TTGTTGATGAACTTG Bphy_0994 1114368 - 1113346 - | pyridoxal-5'-phosphate-dependent protein beta subunit Bphy_0995 1115694 - 1114435 - | acetylornithine deacetylase (ArgE) Bphy_0996 1117005 - 1115827 - | peptidase dimerisation domain-containing protein TERM 1266 1116352 - 1116382 + g 80 -14.6 -3.05596 | CGTGTCGCTCAACGC CGCAGCGAGGCGCG CGC CGCGTGTCGCCGCG TTGAGTCCGCGCGTG Bphy_0997 1120504 - 1117010 - | transcription-repair coupling factor TERM 1267 1117066 - 1117119 + g 74 -10.9 -3.64822 | gap 1, overlap 1117037 1117050 1117112 1117113 ACGGTGTGCCGAGCG CGCGCAGCGTCTCCTTCACGGTCGCG ACG CGC-ACCGTGAAATCGGGACTGCGCG TTTCGATGCGCAGCT TERM 1268 1117508 - 1117520 + g 76 -6.2 -4.58685 | overlap 1117497 TGGCGCCGTGAGGTC CGGC TCCTT GCCG TTTTTCAGCGCCTTT TERM 1269 1118641 - 1118679 + g 77 -11.1 -3.72576 | TGCCGCTTGTCATGT CGCC-GATCACGGCGGC GATCGCG GCCGCC-TGGTCAGGCG TTTCCTCGAAGCCGA TERM 1270 1118753 - 1118731 - G 72 -13.4 -3.14211 | AGTCGCGCGGATCAA GCGGGAAGGC ATG GCCTTCGCGC ATGGCACGGCGAGCG TERM 1271 1120455 - 1120434 - G 73 -9.4 -3.93782 | CCATCGAACACGAAA CGCTGGCC GGCTTT GACCAGCG CGACAGGGGTTGAAG Bphy_0998 1120787 - 1121497 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Bphy_0999 1121567 - 1122046 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 1272 1122093 - 1122113 + T 100 -14 -4.58395 | opp_overlap 1122093 CCGCAGAAGCGACAA CGCCACGC AGATC GCGTGGCG TTTTTCACAAATCGA TERM 1273 1122113 - 1122093 - T 87 -14.7 -3.45054 | opp_overlap 1122093 CCGCAGAAGCGACAA CGCCACGCA GAT CGCGTGGCG TTTTTCACAAATCGA Bphy_1000 1122661 - 1122137 - | alkylhydroperoxidase TERM 1274 1122720 - 1122693 - R 100 -11.2 -5.24129 | opp_overlap 1122693 GTTGCCGATAAAAAA GCCCGCTTGCCT TTCG AGCCTAGCGGGC TTTCGACCACACATT TERM 1275 1122693 - 1122720 + r 74 -11.2 -3.53343 | opp_overlap 1122693 GTTGCCGATAAAAAA GCCCGCTTGCCT TTCG AGCCTAGCGGGC TTTCGACCACACATT Bphy_1001 1123285 - 1122737 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Bphy_1002 1124887 - 1123538 - | integral membrane sensor signal transduction histidine kinase Bphy_1003 1125665 - 1124931 - | two component transcriptional regulator TERM 1276 1125755 - 1125729 - H 74 -6.7 -4.431 | gap 2 CAGTCAGTTACAAAA TTTAC-CCG-GCC TGT GGCACGGCGTAAA GCCTCGGCGCTTACA Bphy_1004 1125895 - 1126230 + | hypothetical protein TERM 1277 1126992 - 1127009 + G 86 -12.7 -3.94 | ACGACGCTCGATGCA GCGCACG CCGG CGTGCGC TTGTTTCGCGATTCG Bphy_1005 1126329 - 1127495 + | hypothetical protein Bphy_1006 1128411 - 1127503 - | squalene/phytoene synthase TERM 1278 1128769 - 1128744 - R 86 -6.7 -4.96848 | opp_overlap 1128744 TGCCGTACACAAAAA CCCCGCCTGTC TTAT AACTCGCGGGG TTTTTGTTTTCGAGG TERM 1279 1128744 - 1128769 + r 95 -6 -5.45802 | opp_overlap 1128744 TGCCGTACACAAAAA CCCCGCCTGT CTTATA ACTCGCGGGG TTTTTGTTTTCGAGG TERM 1280 1128891 - 1128847 - R 71 -10.1 -3.59979 | gap 1, opp_overlap 1128861, overlap 1128861 CCGGCGCACTCGAAA CGGCGCACACAAAACCCCGC ACGAAG GCGGGGTTTT-CATGCATCG AACCGACGCTGCATG TERM 1281 1128878 - 1128861 - R 85 -9.8 -4.52857 | opp_overlap 1128861, overlap 1128847 ACGGCGCACACAAAA CCCCGC ACGAAG GCGGGG TTTTCATGCATCGAA TERM 1282 1128861 - 1128878 + r 83 -9.8 -4.2828 | opp_overlap 1128861 1128847 ACGGCGCACACAAAA CCCCGC ACGAAG GCGGGG TTTTCATGCATCGAA TERM 1283 1129188 - 1129209 + r 79 -13.1 -3.4678 | TCGAGTGTTCCCTCA TCTGGTTGC ATGC GCAACCAGA TTCTCCTGTAGCGCT Bphy_1007 1129594 - 1129337 - | hypothetical protein Bphy_1008 1130434 - 1129979 - | MarR family transcriptional regulator Bphy_1009 1131643 - 1130498 - | glycerate kinase TERM 1284 1130710 - 1130671 - G 71 -12.8 -2.92613 | gap 1, overlap 1130668 CGGCACCCGAAAGCA GCGTGGCCGGCACGCCCGC CGC GCACGCATGCCGGC-ATGC GATGAAGGGCGCCTT TERM 1285 1131246 - 1131304 + g 84 -8.8 -4.56597 | gap 4, opp_overlap 1131245 1131246 AGCGCGACGAAGAAG CGCCGCACGC-CGGCGTCGAGCAGCGAGCG GAT CGC-CTC-GC-CCACGCCGCGCGTCCCGCG TTTTTCGACGGGAAC Bphy_1010 1132151 - 1133497 + | trigger factor TERM 1286 1133512 - 1133548 + F 100 -21.6 -4.70659 | opp_overlap 1133503 1133500 ATAGCATCGCTGCAA CGGCGTGCCGGCTGTC CGAAC GACGGCCCGCACGCCG TTTTTGCATCTGCGC Bphy_1011 1133680 - 1134339 + | ATP-dependent Clp protease, proteolytic subunit ClpP Bphy_1012 1134547 - 1135818 + | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 1287 1135819 - 1135830 + F 75 -5.8 -4.56597 | opp_overlap 1135819 GCGGGTTCGAATTGA TCGG CTGC CCGA TTTTTGAAAAAAAGC TERM 1288 1135844 - 1135867 + F 100 -13.2 -5.42514 | opp_overlap 1135844 GATTTTTGAAAAAAA GCCGTTCATG GCGA CGTGAACGGC TTTTTTCGTTTATCG TERM 1289 1135867 - 1135844 - f 100 -11 -5.41143 | opp_overlap 1135844 GATTTTTGAAAAAAA GCCGTTCATG GCGA CGTGAACGGC TTTTTTCGTTTATCG TERM 1290 1136659 - 1136644 - g 82 -6.8 -4.59773 | CTGCAGGTTGAAAAA CGCATC CGCG GACGCG TCAAGCGTCAGATGG TERM 1291 1138055 - 1138021 - g 81 -16.4 -2.71144 | opp_overlap 1138043, overlap 1138032 1138035 CACGTGCCGGAAGGA GCGACACCGAAGGACG GCC CGTCCGCCGGCATCGC GATGACGACGGCGCT Bphy_1013 1136002 - 1138419 + | ATP-dependent protease La TERM 1292 1138487 - 1138468 - f 100 -12.1 -4.7497 | opp_overlap 1138468 GGTAGCCATCAAAAA CCCGCGG CTTTGC CCGCGGG TTTTTTTGTTCACGC TERM 1293 1138468 - 1138487 + F 100 -12.1 -5.7946 | opp_overlap 1138468 GGTAGCCATCAAAAA CCCGCGG CTTTGC CCGCGGG TTTTTTTGTTCACGC Bphy_1014 1138780 - 1139052 + | histone family protein DNA-binding protein TERM 1294 1139344 - 1139327 - f 81 -11.3 -3.90318 | opp_overlap 1139327 CCAGTATCCTAGAAA GGCGAAC TCCG GTTCGCC TTTTTTATTGCCCGC TERM 1295 1139327 - 1139344 + F 100 -11.3 -5.4505 | opp_overlap 1139327 CCAGTATCCTAGAAA GGCGAAC TCCG GTTCGCC TTTTTTATTGCCCGC TERM 1296 1139371 - 1139381 + F 72 -4.6 -4.62069 | overlap 1139353 CCGCTGTTGTACTAT CGGG CGT TCCG TTTTTGGCATCCGAC TERM 1297 1139495 - 1139509 + G 73 -5.6 -4.41348 | GGGTTTCGTCGGTAT CCAGGG TTT CCGTGG TTTCTTTGACGAGAG TERM 1298 1139752 - 1139713 - g 77 -11.4 -3.72576 | gap 1, opp_overlap 1139744 TGCTGGCCGACGAAA CGCAGCGCCTGCACCTGAC GGT GTCCGACG-ACGCGCTGCG TCGCGCGTTGCTCGC Bphy_1015 1139409 - 1141337 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1299 1141389 - 1141407 + T 100 -16 -4.90778 | opp_overlap 1141389 CCGCCACAACAGAAA GCCCCGCA AGT TGCGGGGC TTTTGTTTCGCTGCC TERM 1300 1141407 - 1141389 - T 100 -16 -4.27117 | opp_overlap 1141389 CCGCCACAACAGAAA GCCCCGCA AGT TGCGGGGC TTTTGTTTCGCTGCC Bphy_1016 1141792 - 1141451 - | hypothetical protein Bphy_1017 1142581 - 1141937 - | lysophospholipase Bphy_1018 1142673 - 1143359 + | ABC transporter related TERM 1301 1143393 - 1143415 + T 100 -19.2 -4.05788 | opp_overlap 1143393 TGCAGGCGAAAAAAA CGGGCCTTCG TGA CGAAGGCCCG TTTGGTTTCGAGCGC TERM 1302 1143415 - 1143393 - T 100 -19.2 -5.44119 | opp_overlap 1143393 TGCAGGCGAAAAAAA CGGGCCTTCG TGA CGAAGGCCCG TTTGGTTTCGAGCGC Bphy_1019 1145075 - 1143453 - | glucose-6-phosphate isomerase TERM 1303 1144942 - 1144921 - G 79 -7.1 -4.56597 | overlap 1144922 CGGTTTTTCGAAAAA TCGGCTGCG AGAC CGCCGCCGG AGAGCGTAAAGCGTT TERM 1304 1145345 - 1145312 - R 74 -10.9 -3.524 | gap 1, overlap 1145293 1145313 CACGCACCCAGATAA CGGGACGCCCGCCGCG GTG CGCGCCGGACGTCA-G TCACGCAACGGATAG Bphy_1020 1146934 - 1145342 - | carbohydrate kinase, YjeF related protein TERM 1305 1146097 - 1146059 - G 73 -9.5 -3.90744 | gap 2, overlap 1146037 1146038 1146056 1146060 1146079 CGCGCCGGCAAATAA GGC-GGCGC-GCGCGGCCA GAA TGGGCGCGCCGCACATGCC CGTGTCGCCGCCCAC TERM 1306 1147033 - 1147006 - R 83 -14.2 -3.10715 | overlap 1147022 GCCAGTACCACCTAA GGCATAGGACGA ATGA CCGTCCCATGCC GGATCTGCGTACTCA Bphy_1021 1148347 - 1147046 - | D-amino-acid dehydrogenase TERM 1307 1150544 - 1150530 - g 72 -8.5 -4.16842 | opp_overlap 1150536 TCCAGCTCGAAGAAA GCGGC CTGTC GCCGC GCGAAATCTGGTCGA TERM 1308 1150852 - 1150888 + G 70 -8 -3.96624 | gap 1, opp_overlap 1150885, overlap 1150855 GCACGAGGCAGCCGT CAACGTGCTGCGTCACC CGAC GGTGGCG-AGCAAGTCG TTTCTGATCACGATC TERM 1309 1151966 - 1151938 - g 77 -5.1 -4.62069 | overlap 1151923 1151940 1151941 CCGCGACGCGAAAAA GATCTTCGACGCG CCG CGCGCCGAACTGC ATCGCACGTGGAGCG TERM 1310 1152284 - 1152301 + G 88 -10.5 -4.34402 | overlap 1152283 GCCGATTTCGCGGGC GCCGTCG CGTG CGGCGGC TTTTCCTATGGCGAC TERM 1311 1152548 - 1152560 + G 72 -3.3 -4.63218 | CTGGTCGAAGTGCAA TCGTC GCC GTCGA TTTTCTTCGCGGGCA Bphy_1022 1148831 - 1152910 + | phosphoribosylformylglycinamidine synthase TERM 1312 1152923 - 1152943 + T 100 -10.3 -4.87626 | TAAGGCTTTGTTTTT CCGCCTGCG CGG CGCGAGCGG TTTTTCGTGTTCGCG TERM 1313 1153137 - 1153121 - T 71 -7.3 -4.16307 | TCTGCAAGAAAAACA TTGCCTC GCG AAGGCAA ACAACCTGAAGCAAA TERM 1314 1153163 - 1153178 + T 76 -11.8 -3.33696 | opp_overlap 1153163 GCAAAAAATAAAAAA GCCGCC CAAA GGCGGC TTCCTTCAAACCAGA TERM 1315 1153178 - 1153163 - T 100 -11.8 -6.04324 | opp_overlap 1153163 GCAAAAAATAAAAAA GCCGCC CAAA GGCGGC TTCCTTCAAACCAGA Bphy_1023 1153982 - 1153203 - | PpiC-type peptidyl-prolyl cis-trans isomerase Bphy_1024 1154307 - 1153993 - | BolA family protein Bphy_1025 1154839 - 1154309 - | intracellular septation protein A TERM 1316 1154381 - 1154360 - G 78 -10.1 -3.96148 | CTGCCCGACGATAAA CACGACGAG GCAG CCCGTCGCG CCGAACAGCTTGAAA Bphy_1026 1156593 - 1155076 - | hypothetical protein TERM 1317 1155982 - 1155952 - G 70 -4.6 -4.37886 | overlap 1155968 GCACGCGGGATAAAA GCGGTCGATCAC ATGATCG GCGAGCGAGCGC AACGCATCGACGCGG Bphy_1027 1156782 - 1158464 + | AMP-dependent synthetase and ligase TERM 1318 1159444 - 1159454 + G 74 -4.6 -4.56775 | opp_overlap 1159427 1159439 1159440, overlap 1159440 CGGAGAGCAAGGCGC TGCG TCA CGCG TTTTTCGGCGAGCGT Bphy_1028 1158642 - 1160726 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 1319 1160792 - 1160766 - g 84 -15.2 -3.37901 | opp_overlap 1160763 AAAGATGCCAATGAA GTTCTGCTCGTC GTC GACGTGCAGAAC GACTTCATGCCGGGC TERM 1320 1161339 - 1161311 - g 71 -12.3 -3.28712 | CGGTTCGCTCGACAA CGCGTGGCACGCG ATG CGCGCGGCAGGCG TCGAACGCGTACAGG Bphy_1029 1160748 - 1161374 + | nicotinamidase TERM 1321 1161950 - 1161934 - g 71 -7.9 -4.10657 | GGAGACGGCCGAAAA CGTCGCG AAG CGCTACG GCATCTCGAGGGATC Bphy_1030 1161473 - 1162651 + | acetyl-CoA acetyltransferase TERM 1322 1162666 - 1162719 + T 100 -18.4 -3.62597 | gap 2, opp_overlap 1162680, overlap 1162680 1162717 ATACGCCTGCGATTC GCACGT-CGAG-GAAAGCCCGCGTAC GAAA GTGCGCGGGCTTTTTCTTGCGCGTGC TTGTTCGGGCGTCAA TERM 1323 1162680 - 1162703 + T 100 -16 -5.07486 | opp_overlap 1162680, overlap 1162666 CGCACGTCGAGGAAA GCCCGCGTAC GAAA GTGCGCGGGC TTTTTCTTGCGCGTG TERM 1324 1162703 - 1162680 - T 88 -13.8 -3.73775 | opp_overlap 1162666 1162680 CGCACGTCGAGGAAA GCCCGCGTAC GAAA GTGCGCGGGC TTTTTCTTGCGCGTG Bphy_1031 1162949 - 1162731 - | hypothetical protein TERM 1325 1162920 - 1162930 + g 72 -8.2 -4.14739 | CGTGTTCCAGCTGAC CCGG TCG CCGG TTTTCAGATGGCTGC TERM 1326 1163650 - 1163616 - g 71 -13.4 -3.01712 | GCCCGGCGCCGAACA CGGGCATCGACCGGGG CCG CCGCAGCCGCCGCCCG GTCAGCGCGGCGAGC Bphy_1032 1163098 - 1163877 + | SH3 type 3 domain-containing protein Bphy_1033 1164416 - 1163925 - | water stress/hypersensitive response domain-containing protein TERM 1327 1164452 - 1164440 - H 90 -10.5 -4.56597 | opp_overlap 1164439 CCCTTCGGGGAAAAA GCCCG AGT CGGGC GTATCGTATGAATTC Bphy_1034 1164573 - 1165196 + | hypothetical protein Bphy_1035 1165538 - 1165245 - | GYD family protein Bphy_1036 1165986 - 1166459 + | thioesterase superfamily protein Bphy_1037 1166520 - 1167518 + | alcohol dehydrogenase TERM 1328 1167854 - 1167835 - g 71 -10.6 -3.61398 | opp_overlap 1167834 1167839 TCTGCTGTTCAACAA CGCGGGCG TCGG CGCCGGCG GCTTTCTATGGGAAA TERM 1329 1167919 - 1167935 + G 75 -13.7 -3.02144 | CAACGTGATGGGCGT CGCGCAC GGC GTGCGCG TCTTCGCGCCCATCA Bphy_1038 1167566 - 1168435 + | short-chain dehydrogenase/reductase SDR TERM 1330 1168979 - 1168952 - g 95 -13.4 -4.25104 | overlap 1168953 GTGGCTGCACGAAAA CGCCGCGCCG TACGGCAT CGACGCGGCG CGGATCGCCGTCGGC Bphy_1039 1168521 - 1169480 + | alpha/beta hydrolase domain-containing protein Bphy_1040 1170325 - 1169504 - | hypothetical protein TERM 1331 1170400 - 1170369 - R 87 -16.6 -2.74563 | gap 1 TGGATACGGGAACCA CG-CGTCGCGCCTGC GTC GGAGGCGCGACGTCG AAGGCGACGTGAACG Bphy_1041 1171474 - 1170425 - | putative glycine cleavage T protein (aminomethyltransferase) TERM 1332 1171413 - 1171361 - G 72 -12.7 -3.15544 | gap 3 CGGCAGCGGCATGAA CGCGCCCGCCGCCCGCACG-GCGTCG AACT CGTCACGCGTG-GGGC-GCGGGAACG CGGGAAGCAATGCGG Bphy_1042 1171552 - 1172562 + | aminodeoxychorismate lyase Bphy_1043 1172562 - 1173182 + | dTMP kinase TERM 1333 1174132 - 1174155 + G 72 -11.6 -3.53224 | overlap 1174134 GGCCCAGTCGACGGT CGGCGCGGCG GGCA CGCCGCGCTA TTTCCCGGCGGCGTC TERM 1334 1174134 - 1174153 + G 90 -16.4 -3.34398 | overlap 1174132 CCCAGTCGACGGTCG GCGCGGCG GGCA CGCCGCGC TATTTCCCGGCGGCG Bphy_1044 1173278 - 1174327 + | DNA polymerase III, delta prime subunit Bphy_1045 1174381 - 1175172 + | TatD family hydrolase Bphy_1046 1175224 - 1175997 + | ankyrin Bphy_1047 1176115 - 1176471 + | hypothetical protein TERM 1335 1176473 - 1176504 + F 88 -14.5 -3.62275 | gap 2 AGACGGGCAGTTGAG CGGC--GCACGGCGC CATC GCGCCGTGCTTGCCG TTTGGCCTGGTCGCT TERM 1336 1176531 - 1176559 + F 100 -19.6 -4.61566 | CGCTGTTCATGTCGA CGCGCGCCGTGT GTTCA GCACGGCGCGCG TTTTGTGCTTTCAGC Bphy_1048 1176723 - 1178162 + | alpha,alpha-trehalose-phosphate synthase (UDP-forming) Bphy_1049 1178188 - 1178442 + | hypothetical protein Bphy_1050 1178682 - 1179752 + | glycosyl transferase group 1 TERM 1337 1179828 - 1179795 - T 100 -15.3 -4.3739 | opp_overlap 1179797, overlap 1179797 CATGCGCGCATAAAA GAGGGCGACGCGATC CGAT GATTGCGTCGCCCTT CGTCATCTATGCCGA TERM 1338 1179797 - 1179826 + T 100 -20.1 -3.26545 | opp_overlap 1179795 1179797 TGCGCGCATAAAAGA GGGCGACGCGATC CGAT GATTGCGTCGCCC TTCGTCATCTATGCC TERM 1339 1179826 - 1179797 - T 100 -17.9 -3.79419 | opp_overlap 1179797, overlap 1179795 TGCGCGCATAAAAGA GGGCGACGCGATC CGAT GATTGCGTCGCCC TTCGTCATCTATGCC Bphy_1051 1180578 - 1179991 - | putative lipoprotein TERM 1340 1180934 - 1180949 + r 74 -2.5 -5.00616 | overlap 1180923 1180930 GGAAAGCCGCAGCGG CGTTG CTATGC CAGCG TTTTTTCCAACGGAC Bphy_1052 1181421 - 1180975 - | putative transmembrane protein TERM 1341 1181644 - 1181666 + r 88 -16.2 -3.16475 | opp_overlap 1181644 GAAGCTCGAAAAAAA GCGGCGCCCG TGA CGGACGCCGC TTGCCTGTCTCGCTG TERM 1342 1181666 - 1181644 - R 100 -18.4 -5.43866 | opp_overlap 1181644 GAAGCTCGAAAAAAA GCGGCGCCCG TGA CGGACGCCGC TTGCCTGTCTCGCTG Bphy_1053 1182026 - 1181730 - | PsiF repeat-containing protein Bphy_1054 1182314 - 1182610 + | YCII-related TERM 1343 1183902 - 1183880 - g 72 -11.3 -3.54129 | CACATCGGCCGGAAA TGCGCTCGC GAGCA GCGAGCACA CACCGCTGTGGATGA Bphy_1055 1183125 - 1184441 + | putative transposase A-like protein TERM 1344 1184470 - 1184442 - T 83 -14 -3.50393 | gap 1, opp_overlap 1184448 1184450, overlap 1184445 TCCCACGCGAGATAA CG-ACGATGGCGT GAAC ACGCCATCGTTCG ACGCTGTGCTGCAAC TERM 1345 1184466 - 1184445 - T 82 -14.5 -2.89298 | opp_overlap 1184448 1184450, overlap 1184442 CACGCGAGATAACGA CGATGGCGT GAAC ACGCCATCG TTCGACGCTGTGCTG TERM 1346 1184696 - 1184669 - T 100 -19.2 -3.40299 | opp_overlap 1184665 1184682 1184694 CGACGACATGGAGAA GCGGTGACGGGC AGCA ACCCGTCACCGC GCGATGCGTTATTGA Bphy_1056 1186222 - 1184705 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Bphy_1057 1186810 - 1188207 + | undecaprenyl-phosphate glucose phosphotransferase TERM 1347 1188675 - 1188726 + G 70 -11.5 -3.38768 | gap 2 CGGCACCGCGCGCCG CGTC-GC-GCATGCCGTGCAGGACG AGCT CGACCAGCGCGGCCTGCAGCAGATG TTCTCGGTCGTGTCG Bphy_1058 1188289 - 1189719 + | nucleotide sugar dehydrogenase Bphy_1059 1189757 - 1190218 + | protein tyrosine phosphatase Bphy_1060 1190212 - 1191393 + | polysaccharide export protein TERM 1348 1191403 - 1191435 + F 73 -12 -3.05596 | gap 1 CGCTGATGCCTTCAT CGACGTCTGCATCGG CATT CCGTTGCGGACG-CG TTGCCTGAACCGCTG TERM 1349 1191620 - 1191606 - g 74 -10 -3.75766 | GCCAGAACCGAAGAA GAGGAC GTG GTCCTC GGCCAACTGCTGCAG TERM 1350 1191663 - 1191698 + G 75 -12.6 -3.46563 | gap 1, overlap 1191664 GACATCGGGTGGCTG ATCGG-CATCGCGGCGA CCA TCGTCGCGATGGCCGGC TTCTACTGCTATGTC TERM 1351 1191664 - 1191697 + G 78 -16.1 -2.67456 | gap 1, overlap 1191663 ACATCGGGTGGCTGA TCGG-CATCGCGGCGA CCA TCGTCGCGATGGCCGG CTTCTACTGCTATGT TERM 1352 1193085 - 1193069 - g 95 -15.1 -4.07568 | GGCGCTGCTCGAAAA CGCCGCG GTG CGCGGCG GCGCGCGCGAGCGTG Bphy_1061 1191585 - 1193777 + | exopolysaccharide tyrosine-protein kinase TERM 1353 1194715 - 1194693 - g 85 -12.6 -4.07568 | overlap 1194706 CGCTGGGTTCGAAAA GCGCGCGCAC GAA GCTCGCGCGC TGGCATGCCGTGCGT Bphy_1062 1193843 - 1194799 + | glycosyl transferase family protein Bphy_1063 1194796 - 1195968 + | putative glycosyltransferase group 1, RfaG-like protein Bphy_1064 1195972 - 1197432 + | putative transmembrane protein TERM 1354 1197556 - 1197612 + G 74 -12.8 -3.28791 | opp_overlap 1197605 GTCGCCTCGCATGTC GCGCCCGAACTGCTGCAGCACCCGCT CGTGA AGTGGGTGCCCGTGAAGATCGGGCGC TTCTGGCCGACCAAT TERM 1355 1197933 - 1197909 - g 74 -12.8 -3.28712 | GGCCGTGTCGCAGAA GGTCGCGGCG GAGAT CGCCGCGATC GGGCTCACGCCGCGC TERM 1356 1198585 - 1198553 - g 87 -17.7 -2.91264 | overlap 1198572 CGCTGTATCGACAGA TCGCGGGGCGGCG CGAAGAC CGCCGCCGCGCGA CGACACTCGACCACA Bphy_1065 1197433 - 1198668 + | glycosyl transferase group 1 Bphy_1066 1198720 - 1199877 + | glycosyl transferase group 1 TERM 1357 1199916 - 1199935 + F 100 -15 -5.30616 | opp_overlap 1199910 1199915 1199914 GCGAAGTGACGAACG GGACGGCC GCGA GGCCGTCC TTTTTCTTTGGGTGG Bphy_1067 1200203 - 1200463 + | XRE family transcriptional regulator TERM 1358 1201323 - 1201338 + G 71 -7.6 -4.18018 | opp_overlap 1201310 CATCCGCGAAGGCGT CAGCTT CGAG AAGCTG TTTTCGCTCCAGCGG TERM 1359 1201606 - 1201632 + G 79 -11.5 -3.85698 | gap 1, opp_overlap 1201583 GCGCTCGCGGATTTT GCGCAGCGCACG GGCA CG-GCGCCGCGC TTTCTCGCGCGCGAA Bphy_1068 1200463 - 1201824 + | HipA domain-containing protein TERM 1360 1201871 - 1201847 - T 74 -7.8 -4.11484 | opp_overlap 1201850 1201851, overlap 1201851 GTCAATCGGGTAAAA CAAAGGGCGC TTTAC GTGCCCCTTG CTCGTCGACGGATGT TERM 1361 1201867 - 1201851 - T 72 -5 -4.65263 | opp_overlap 1201850 1201851, overlap 1201847 ATCGGGTAAAACAAA GGGCGC TTTAC GTGCCC CTTGCTCGTCGACGG Bphy_1069 1202929 - 1201886 - | GDP-mannose 4,6-dehydratase Bphy_1070 1203705 - 1202926 - | GDSL family lipase TERM 1362 1203748 - 1203691 - G 75 -14.7 -2.73124 | gap 1, opp_overlap 1203730, overlap 1203690 GGCCAGCGCGCAAAG CGCCGCGCGGCGCATCGAGG-CGGGC TTCAAGC GCTCGTCCTCGAGGCTTCGCGCGCCG CGTGCAGCGGTGTCT TERM 1363 1203730 - 1203767 + r 71 -8.3 -3.99374 | gap 1, opp_overlap 1203691 CTTCAAGCGCTCGTC CTCGAGGCTTCGC-GCGC CGC GTGCAGCGGTGTCTCGCG TTCTTCTTCATGCGG Bphy_1071 1204817 - 1203717 - | acyltransferase 3 TERM 1364 1204962 - 1204951 - H 72 -4.4 -4.56702 | opp_overlap 1204961 CTGGAATGAAATAAA CGAA TTGA TTCG ATTAATAAAAATCGC TERM 1365 1205361 - 1205375 + G 74 -12.8 -3.20723 | GACCCCTGCCTGCCC GCGCGC TGT GCGCGC TTGCCTTGCTCGCCA TERM 1366 1206055 - 1206075 + G 84 -13.9 -3.64703 | overlap 1206056 GACGGACACGCGAGG CGCGCGGCC GCA GGCCGCGCA TTTCGCTGCCGACGG TERM 1367 1206056 - 1206074 + G 87 -17.4 -2.78679 | overlap 1206055 ACGGACACGCGAGGC GCGCGGCC GCA GGCCGCGC ATTTCGCTGCCGACG Bphy_1072 1205294 - 1207579 + | hypothetical protein TERM 1368 1208584 - 1208628 + G 71 -13.6 -2.65815 | gap 2 TTCACGCATGGGTGG GCAGCGAGGTGGCCGACGCGGC AGG GCC-CGTCGGCCGCATC-CTGA TCATCTCCGTGTGGC Bphy_1073 1207599 - 1209077 + | polysaccharide biosynthesis protein TERM 1369 1209137 - 1209098 - g 71 -10.1 -3.63073 | gap 2 GATATCGTTGAAGAA GACCTGC-T-GCGCCCCAC GCCC GTGAAGCGCGATGCAGGCC ACGATCTCAACACGG TERM 1370 1210976 - 1210962 - g 72 -11.4 -3.53811 | GCGATGTGCCGCAAA GCGTGC TGC GCACGC GGCTGGACCTGCCGC Bphy_1074 1209074 - 1211560 + | glycosyl transferase group 1 TERM 1371 1211575 - 1211602 + T 100 -19.2 -4.85782 | opp_overlap 1211575 ACCAGGAAGGAAAAA GGCCGGTGCGAT CTGT ATCGCGCCGGCC TTTCTTTTTGCCGCA TERM 1372 1211602 - 1211575 - T 100 -17 -4.90869 | opp_overlap 1211575 ACCAGGAAGGAAAAA GGCCGGTGCGAT CTGT ATCGCGCCGGCC TTTCTTTTTGCCGCA Bphy_1075 1212830 - 1211640 - | acyltransferase 3 TERM 1373 1212031 - 1212059 + g 75 -12.4 -3.53811 | opp_overlap 1212038 GCACCGACCATCGGC CACGACATGCGG CTGTC CCGCGCGTCGTG TTTGACCCGCGTGAC TERM 1374 1212248 - 1212233 - G 74 -2.4 -4.74103 | GGCGCAACGCAAAAA GCAGCG GATA CACGGC ATAGAACTGCACTTC TERM 1375 1212581 - 1212566 - G 100 -3.2 -5.55664 | overlap 1212568 TGATGACGAAAAAAA TCGGCA CGCC TGCGGA GCCCCATGCAATTGG TERM 1376 1212731 - 1212759 + g 71 -7.3 -4.1822 | overlap 1212729 CGAATCCGCGCATCG CGTCGATGACGTG TTC CTTGTCGGCGACG TTTGTTGCGCTGCGC TERM 1377 1212967 - 1212984 + H 74 -2.7 -4.93877 | AATGATTGAAAGGGT CTGCA TGCCCTAT TGCAG TTTTATTTCATGCCC Bphy_1076 1213088 - 1213234 + | hypothetical protein Bphy_1077 1213480 - 1214382 + | UTP-glucose-1-phosphate uridylyltransferase TERM 1378 1214435 - 1214389 - T 74 -11.4 -3.51232 | gap 1, overlap 1214385 1214390 GCTGCCTGAAAGCAA TGCCAGCGGCGGCGACGGCGC CTCCAT GCGCCGTCGC-GCTGCGGGTG CGCGGGCACGCGCGC TERM 1379 1214434 - 1214390 - T 81 -14.9 -2.70525 | gap 1, overlap 1214389 1214385 CTGCCTGAAAGCAAT GCCAGCGGCGGCGACGGCGC CTCCAT GCGCCGTCGC-GCTGCGGGT GCGCGGGCACGCGCG TERM 1380 1214475 - 1214526 + T 100 -16.6 -3.65902 | gap 1 CACGACGAAGGGGAC CCGCTGGCCGACGATGCGCGAGCGA GTA TTGCGCGCACATCGTCG-TCGGTGG TTTCGCTGAAGTCGG Bphy_1078 1215127 - 1214459 - | phosphoribosyltransferase TERM 1381 1214768 - 1214816 + g 86 -10.2 -4.26903 | gap 2, opp_overlap 1214792, overlap 1214769 CGCCACGTCGACATG CGCGC-GCT-GCGGGTCGCGAAAC AGT GCTTCGCGTCGCGCAAGCTGCGCC TTTTCCTCCGCTAGC TERM 1382 1214769 - 1214815 + g 76 -13.7 -3.1582 | gap 2, opp_overlap 1214792, overlap 1214768 GCCACGTCGACATGC GCGC-GCT-GCGGGTCGCGAAAC AGT GCTTCGCGTCGCGCAAGCTGCGC CTTTTCCTCCGCTAG TERM 1383 1214909 - 1214894 - G 71 -10.4 -3.60525 | TTCATTCACATACAA CGCGTC GCCC GACGCG ATCGCACCCATCGCG Bphy_1079 1215931 - 1215161 - | IclR family transcriptional regulator TERM 1384 1216135 - 1216172 + H 100 -15.7 -3.67597 | opp_overlap 1216126 1216127 1216167, overlap 1216126 TGCAAACCCGCGAAC CGCGCGTTAATCGCACA ACAC TGTGCGATTAACGAACG TTATTGCGTCCGGGA TERM 1385 1216871 - 1216857 - g 74 -11.4 -3.61715 | opp_overlap 1216857 GATGGGCGTGAAGAA CGCGCT GCC AGCGCG CCGCGAGATTCTCGA TERM 1386 1217081 - 1217054 - g 95 -14.8 -4.08394 | opp_overlap 1217051, overlap 1217038 ACACGCTGGCGAAAA GCAACGCGCAGC TCGT GCAGCGCGTCGC GGATCTGTGCGGCCA Bphy_1080 1216318 - 1217163 + | hypothetical protein TERM 1387 1217251 - 1217273 + G 71 -10.5 -3.65902 | opp_overlap 1217250 1217251 ACGCTCGTCGAGAAG CTCGCTGCG ATTCG CGCGGCGGG TTTCGATGGCGTCGA TERM 1388 1218053 - 1217997 - g 75 -14.4 -3.04144 | opp_overlap 1217997 GCTGTACCTCGAAGA GCAGGCGGCGC-ATCAGCGCACGGGGCA GAG CGCGCAGC-CGCTGTTCACGCCGCCTGC GCCGCCCGCGCATTC TERM 1389 1218235 - 1218246 + G 83 -2.2 -5.14563 | GCGGAGACGGATTCA TTCG CGAG CGAG TTTTTTCATCGGCAC Bphy_1081 1217200 - 1219086 + | 4-hydroxyphenylpyruvate dioxygenase TERM 1390 1219273 - 1219257 - f 77 -12.3 -3.53012 | CCGTTCGCCGGCAAA GCGATGC GCT GCATCGC CATAACACTCAAACA Bphy_1082 1219304 - 1220521 + | porin TERM 1391 1220512 - 1220526 + F 86 -5.6 -5.03747 | overlap 1220490 AGCGGGCATCATTCA CCGCTT CTG ATGCGG TTTTTTGCCGGCTTT TERM 1392 1220603 - 1220628 + F 100 -14.7 -5.00616 | opp_overlap 1220605, overlap 1220607 TTGCGTGAAGCAGGA CAGGGCGCCGC AATT GCGGCGCTTTG TTTTTTCGGGCACGC TERM 1393 1220607 - 1220624 + F 100 -14.1 -5.04249 | opp_overlap 1220605, overlap 1220603 GTGAAGCAGGACAGG GCGCCGC AATT GCGGCGC TTTGTTTTTTCGGGC TERM 1394 1220950 - 1220927 - g 75 -6.6 -4.42238 | overlap 1220930 GCAGCGCAAGGAAAA GCAGGCTGCG GACA CGCACGCTGC CCAACCGGGCAAGAA TERM 1395 1221129 - 1221119 - g 72 -8.2 -4.09685 | CGGCAGGTTGCAAAA GCGG TAT CCGC TGGCGTTTCCGAAGA Bphy_1083 1220856 - 1221512 + | ProQ activator of osmoprotectant transporter ProP Bphy_1084 1221727 - 1223211 + | integrase catalytic region Bphy_1085 1224726 - 1223482 - | hypothetical protein TERM 1396 1224662 - 1224644 - G 75 -3.9 -4.71382 | gap 1, opp_overlap 1224644 AGAACCAGCGAAAAA TTCTG-GG TATC CCGCAGAA TATCGTCAGCGGAAG Bphy_1086 1225560 - 1224958 - | hypothetical protein TERM 1397 1225959 - 1225977 + r 88 -11.6 -4.11216 | GCTTATGCGGCTGCC CGGGGCGC TCG GCACCCCG TTTTCCGAATGCAGA Bphy_1087 1227153 - 1226266 - | hypothetical protein Bphy_1088 1227658 - 1228515 + | hypothetical protein TERM 1398 1229539 - 1229526 - g 74 -2.3 -4.84359 | GCACGCGCAGAAAAA CGGAC GGAC GTCGG CAAGGCGACGATCAT Bphy_1089 1228794 - 1230275 + | arginine/ornithine antiporter Bphy_1090 1230289 - 1231548 + | arginine deiminase Bphy_1091 1232675 - 1231662 - | hypothetical protein Bphy_1092 1234524 - 1233043 - | PAS/PAC sensor signal transduction histidine kinase TERM 1399 1233186 - 1233211 + g 70 -11.1 -3.4252 | overlap 1233183 AGTCGGGCTTGTCGC CGGGCGCGG AAGCCGCC CCGCGTCCG TTGTCATCGATGCGA Bphy_1093 1234885 - 1234622 - | hypothetical protein Bphy_1094 1235697 - 1235005 - | signal-transduction protein Bphy_1095 1236267 - 1237094 + | hypothetical protein Bphy_1096 1237292 - 1237558 + | hypothetical protein TERM 1400 1238165 - 1238133 - g 85 -11.9 -4.07687 | overlap 1238110 1238134 ACGCTCTGCGCAAAA TGGTGCGCACGACGG CAA CCGTCGTGCGCCGGA TCGGGGAGGATAGTC TERM 1401 1238163 - 1238134 - g 76 -14.3 -3.04398 | gap 1, overlap 1238110 1238133 CGCTCTGCGCAAAAT GGTGCGCACGACGG CAA CCGTCGTGCGC-CG GATCGGGGAGGATAG TERM 1402 1239162 - 1239150 - g 75 -6.9 -4.37886 | GCACGCTCGACAAAA GCCAC TAT GCGGC AACAAAAGCGATTAC Bphy_1097 1237691 - 1240363 + | magnesium-translocating P-type ATPase Bphy_1098 1241377 - 1240373 - | 1-phosphofructokinase Bphy_1099 1243831 - 1241387 - | phosphoenolpyruvate synthase TERM 1403 1242142 - 1242122 - G 78 -13.9 -3.21276 | overlap 1242120 1242124 GGGCCGCGGATAACA CACGGCCGC TAT GCGGCCGAG TCCGCAGGCAAGCCG TERM 1404 1242140 - 1242124 - G 80 -15.1 -3.17146 | overlap 1242122 1242120 GCCGCGGATAACACA CGGCCGC TAT GCGGCCG AGTCCGCAGGCAAGC Bphy_1100 1244344 - 1243874 - | hypothetical protein Bphy_1101 1245049 - 1244399 - | transport-associated TERM 1405 1246141 - 1246193 + G 72 -12.7 -3.17051 | gap 2, overlap 1246122 1246139 GCGCGGTTTCGAGCG CTGGCTTGTCGGCAGCGTCGCCGCC CGCAC GGT-GCGACTC-GCCGACACGCCCG TATTGCTCGTGCGAG Bphy_1102 1245275 - 1246234 + | UspA domain-containing protein Bphy_1103 1248897 - 1246429 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 1406 1247096 - 1247040 - G 71 -14.4 -2.71011 | overlap 1247026 AGTCGTCGCGAAGCA GCACCAGCGACGCGACTTCGCG-CGCCA CTT CGGCGCCGCGGCGTCCCATCGC-GATGC CGATATGCGCAGCCT Bphy_1104 1249375 - 1248884 - | putative signal peptide exported protein Bphy_1105 1249721 - 1251085 + | beta-lactamase domain-containing protein Bphy_1106 1252988 - 1251132 - | poly-beta-hydroxybutyrate polymerase domain-containing protein TERM 1407 1253040 - 1253016 - R 90 -15.7 -3.48593 | GATCTCGCCACAGAA CCATGCCTGCG TTA CGCGGGCATGG ACTCGAACACCTGAC Bphy_1107 1253327 - 1253088 - | hypothetical protein Bphy_1108 1254040 - 1253390 - | transport-associated TERM 1408 1253994 - 1254009 + g 74 -4.7 -4.49958 | ACGGCGGGGTCCCAC TCGAG TTCATC CTCGA TTTCTTTCCTCAACT TERM 1409 1254406 - 1254373 - g 86 -16 -3.18264 | gap 1, opp_overlap 1254399 1254400 CTGCTGACTTACGAA CCCGCGCACG-GCCG TGCGC CGGCTCGTGCCCGGG GCGACACCCCTGCCG TERM 1410 1254806 - 1254856 + G 73 -14.1 -2.80994 | opp_overlap 1254853, overlap 1254794 TGCCGCCGCAGCAGC GCGATATCTTCTCTGCCGTCGCG GCAGG CGCAATGGCACAGAACGTATCGC TGTACTGCGCTTCCG Bphy_1109 1254262 - 1255011 + | hypothetical protein TERM 1411 1255064 - 1255100 + T 93 -11.5 -4.64766 | opp_overlap 1255067 1255072, overlap 1255066 TTGCGCGAACAAGAA CAAGGAAACGGGCCTGG CAT TCAGGCCGGTTTCCCCG TTTTTCCGCTCTCCG TERM 1412 1255066 - 1255098 + T 71 -12.7 -2.62545 | opp_overlap 1255067 1255072, overlap 1255064 GCGCGAACAAGAACA AGGAAACGGGCCTGG CAT TCAGGCCGGTTTCCC CGTTTTTCCGCTCTC TERM 1413 1255097 - 1255067 - T 100 -15.5 -4.09963 | opp_overlap 1255066 1255064, overlap 1255072 CGCGAACAAGAACAA GGAAACGGGCCTG GCATT CAGGCCGGTTTCC CCGTTTTTCCGCTCT TERM 1414 1255092 - 1255072 - T 74 -8.2 -4.15849 | opp_overlap 1255066 1255064, overlap 1255067 ACAAGAACAAGGAAA CGGGCCTG GCATT CAGGCCGG TTTCCCCGTTTTTCC Bphy_1110 1255673 - 1255236 - | heat shock protein Hsp20 Bphy_1111 1256474 - 1255794 - | transport-associated Bphy_1112 1258625 - 1256664 - | ATP-dependent metalloprotease FtsH TERM 1415 1258368 - 1258396 + g 79 -10.1 -4.11216 | opp_overlap 1258384 AGCTGCCGCGTCCGA TGCCGGCAGCAGC GAA GCGGCACCCGGCA TTTTGAGCGTACCGG Bphy_1113 1258806 - 1260428 + | chaperonin GroEL TERM 1416 1260615 - 1260636 + F 70 -4.3 -4.69053 | overlap 1260619 CCAGCGACACGGATG CGTTCTGGC GGGC GCCGCAGCG TTTTCTTCGGTACTG Bphy_1114 1260671 - 1261966 + | polyhydroxyalkanoate depolymerase, intracellular TERM 1417 1262976 - 1262966 - gT 70 -4.6 -4.34402 | TTTTGTACAGTAAAA GCGC CTC GCAC ACGAAAGCCGCCGCA Bphy_1116 1263916 - 1263641 - | periplasmic protein of unknown function, DUF1488 Bphy_1115 1261963 - 1263702 + | hypothetical protein Bphy_1117 1264691 - 1264221 - | UspA domain-containing protein Bphy_1118 1264941 - 1265396 + | hypothetical protein Bphy_1119 1266249 - 1265410 - | Ion transport 2 domain-containing protein Bphy_1120 1266677 - 1266429 - | hypothetical protein Bphy_1121 1267907 - 1267026 - | H+transporting two-sector ATPase gamma subunit TERM 1418 1267170 - 1267200 + g 80 -8.2 -4.36914 | overlap 1267161 GCCGACGTGATCGCT CGCCGCGAGCAT CGCTGTC ATGCGCGCCGCG TTTTCTGCAGCAAAA Bphy_1122 1269465 - 1267888 - | ATP synthase F1, alpha subunit TERM 1419 1268622 - 1268659 + g 71 -13.3 -2.94747 | opp_overlap 1268634 CGCGTCCGGGCGGCT CGCGGGTAAGCAGCGCG AGCT CGCGATGCGTGGCCGCG TGTCTGGTCAGATCG Bphy_1123 1270195 - 1269452 - | H+transporting two-sector ATPase B/B' subunit Bphy_1124 1270448 - 1270203 - | ATP synthase F0, C subunit Bphy_1125 1271140 - 1270445 - | ATP synthase F0, A subunit Bphy_1126 1271430 - 1271137 - | hypothetical protein Bphy_1127 1271737 - 1271423 - | F0F1-ATPase subunit Bphy_1128 1272165 - 1271734 - | alternate F1F0 ATPase, F1 subunit epsilon Bphy_1129 1273648 - 1272179 - | ATP synthase F1, beta subunit TERM 1420 1273581 - 1273567 - G 77 -12.8 -3.40071 | opp_overlap 1273567 AATCGACATCGACAA CGGCGC CCC GCGCCG CGATCACGCGCCCCG Bphy_1130 1273866 - 1274480 + | LemA family protein Bphy_1131 1275464 - 1274718 - | acetoacetyl-CoA reductase Bphy_1132 1275711 - 1275466 - | hypothetical protein Bphy_1133 1275922 - 1276761 + | UspA domain-containing protein Bphy_1134 1276778 - 1277281 + | UspA domain-containing protein Bphy_1135 1277278 - 1278111 + | UspA domain-containing protein Bphy_1136 1278740 - 1278294 - | UspA domain-containing protein TERM 1421 1278907 - 1278897 - H 76 -6.8 -4.42788 | overlap 1278887 TGTAAGCGCACAAAA CGCT GAG AGCG GGGTGCATGCGAGTC TERM 1422 1279002 - 1278984 - H 72 -5.2 -4.48987 | CGCGTACAATCAAAA GCACGGTC ATC AATCGTGC CAGGCAACGCAGGTC Bphy_1137 1279121 - 1279765 + | two component LuxR family transcriptional regulator Bphy_1138 1279935 - 1280717 + | Crp/FNR family transcriptional regulator Bphy_1139 1280885 - 1281916 + | hypothetical protein Bphy_1140 1281952 - 1282296 + | cytochrome c family protein Bphy_1141 1282340 - 1282708 + | hypothetical protein Bphy_1142 1283055 - 1282735 - | hypothetical protein TERM 1423 1284067 - 1284049 - g 84 -13.8 -3.63068 | opp_overlap 1284049 CTACATGATCTGAAA CCGCGCCC GAT GGGCACGG GTCGCGATCTGTACG Bphy_1143 1283440 - 1284948 + | PAS/PAC sensor signal transduction histidine kinase Bphy_1144 1284958 - 1285410 + | response regulator receiver protein TERM 1424 1286349 - 1286336 - g 70 -2.3 -4.59853 | overlap 1286337 CGAATGCGCGAAAAA CGGCA ACCG CGCCA CAGATATCGATGCGC Bphy_1145 1285407 - 1286879 + | multi-sensor signal transduction histidine kinase TERM 1425 1286882 - 1286872 - f 70 -2.4 -4.77165 | CGGTTGAGAACAAAA GCCC TTA GGCC ACACGGGGCCGTTGC Bphy_1146 1287091 - 1287567 + | CreA family protein Bphy_1147 1287900 - 1287610 - | hypothetical protein Bphy_1148 1288939 - 1288145 - | ABC transporter related Bphy_1149 1289937 - 1288939 - | monosaccharide-transporting ATPase Bphy_1150 1291013 - 1289934 - | ABC-type sugar transport system periplasmic component-like protein TERM 1426 1291323 - 1291301 - R 100 -12 -4.45544 | opp_overlap 1291294 1291321 GCGCACCAACGAAAA GGCCCGGA ACAGACG TCCGGGCC TTGCAGGCTTTCAGG Bphy_1151 1291826 - 1291362 - | hypothetical protein TERM 1427 1291906 - 1291890 - R 79 -13.7 -3.05844 | TCGCGCATTCGAAGA GCCGCTC GAT GAGCGGC CCGCTCAGTCCGTCT Bphy_1152 1292918 - 1291911 - | RpiR family transcriptional regulator Bphy_1153 1293942 - 1292875 - | peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase TERM 1428 1293089 - 1293123 + gr 73 -11.3 -3.33815 | opp_overlap 1293087, overlap 1293088 GTATCGGCAAGGATC GCGAGCGGATCGGGC GCGCG GCCCGCTTCGCGTGC TTCGTTCAGCAGCGT TERM 1429 1293356 - 1293326 - GR 78 -7.6 -4.3467 | gap 1 AGCGTCAGATGAAAA CCGC-CTGCGCGA GGACTG TCGCGCAACACGG TAAGGGCTGCGTCGA TERM 1430 1293517 - 1293487 - GR 91 -16.9 -3.59979 | overlap 1293516 CTCCGTCACCGCAAA CGTGTGTCCCGGC AGCGA GCCGGGATACACG AACGCCGCAAATCCG Bphy_1154 1294693 - 1293953 - | ABC transporter related Bphy_1155 1295346 - 1294690 - | polar amino acid ABC transporter, inner membrane subunit Bphy_1156 1296119 - 1295373 - | extracellular solute-binding protein TERM 1431 1296428 - 1296399 - R 100 -15 -4.75776 | overlap 1296423 AATCCAATGCAAAAA CGCGCGCTCCGC CTGGAC ACGGAACGCGCG TTCGCCGCTGCGGCG Bphy_1157 1297642 - 1296503 - | porin TERM 1432 1297837 - 1297806 - R 75 -8.8 -4.08317 | gap 1 GAAGCTGAAATGAAA TG-GGGCGCATCC CTCTCGC AGATGCGCCCTCA CCGGCTAATTGCAGC Bphy_1158 1298974 - 1298069 - | LysR family transcriptional regulator TERM 1433 1299138 - 1299162 + G 75 -7.1 -4.37658 | opp_overlap 1299137 TCGCCATTCGAAACG CGGCCGG CCAGTACGATT CCGGCCG TTTTCTCGACGACTT TERM 1434 1299562 - 1299530 - g 75 -12.6 -3.53012 | opp_overlap 1299530 1299561, overlap 1299515 CTCGCCGCGCTGAAA GCCGTGCTCGACGC GCGCG GCGGCAAGCTCGGC TTCAATCTGAAACTG Bphy_1159 1299110 - 1300531 + | peptidase M20 Bphy_1160 1300542 - 1301864 + | major facilitator transporter TERM 1435 1302270 - 1302250 - g 75 -11.9 -3.45023 | CGACGACGAGCACAA TGCGCCCAT CAC ATGGACGCA CCTGCTGCAACAGAC TERM 1436 1302673 - 1302653 - g 74 -11.1 -3.6284 | AACGATCAGTTGAAA GTCGCGCAG ATG CTGCTCGAC GACGGGCTTGCCGAC Bphy_1161 1301894 - 1302964 + | beta-lactamase Bphy_1162 1304087 - 1302990 - | hypothetical protein Bphy_1163 1304406 - 1304185 - | hypothetical protein TERM 1437 1304361 - 1304343 - G 71 -7.3 -4.07885 | opp_overlap 1304343 1304345 TATGGCGCTCGAAAA GCCGCGC GAAAT GCGCGTC TTCTTTCTTCAGGCG TERM 1438 1304343 - 1304361 + g 75 -8 -4.20367 | opp_overlap 1304343, overlap 1304345 TATGGCGCTCGAAAA GCCGCGCG AAA TGCGCGTC TTCTTTCTTCAGGCG TERM 1439 1304345 - 1304359 + g 71 -9.2 -3.69841 | opp_overlap 1304343, overlap 1304343 TGGCGCTCGAAAAGC CGCGCG AAA TGCGCG TCTTCTTTCTTCAGG Bphy_1164 1305508 - 1304606 - | Beta-lactamase Bphy_1165 1305606 - 1306508 + | LysR family transcriptional regulator Bphy_1166 1308038 - 1306536 - | major facilitator transporter Bphy_1167 1310440 - 1308206 - | DEAD/DEAH box helicase domain-containing protein TERM 1440 1308516 - 1308568 + gr 79 -12.5 -3.33696 | opp_overlap 1308553, overlap 1308556 ATCCAGTCGCCCGAC CAGGTGGCGAGTACCGTGTTGCCGC CAT GCGTGAACACGGCGCGCGTCGCCAG TTCGTTCGAAGCGAA TERM 1441 1308556 - 1308596 + gr 76 -12.5 -3.03159 | opp_overlap 1308553, overlap 1308516 CATGCGTGAACACGG CGCGCGTCGCCAGTTCGTT CGA AGCGAAATAGCGGCGCGCC TCTTCGAGCAGTTCG TERM 1442 1310000 - 1309961 - GR 87 -16.3 -2.96216 | overlap 1309934 GTCGACGACGACATA GCGCAGCGCGCCGAAGG TCGCGG CCAGCGACGCGCCGCGC GTGACGAACATCGCT Bphy_1168 1311722 - 1310412 - | hypothetical protein TERM 1443 1310885 - 1310868 - GR 71 -7.7 -3.96148 | gap 1 CGTGTCGAGCAGAAA CTCGGGCG TGC CGCCC-AG CACGAAGCCGAGCCC Bphy_1169 1314067 - 1311719 - | hypothetical protein TERM 1444 1314163 - 1314126 - R 71 -11.2 -3.27215 | gap 1, opp_overlap 1314145, overlap 1314115 1314114 1314129 AAACTGCGACACGAA CCACGCGCCGCCCACGC TTGTG ACGCGGGCG-CGCGCCG CTATCGTCCTGGCGG TERM 1445 1314160 - 1314129 - R 76 -13.7 -2.81547 | gap 1, opp_overlap 1314145, overlap 1314115 1314126 1314114 CTGCGACACGAACCA CGCGCCGCCCACGC TTGTG ACGCGGGCG-CGCG CCGCTATCGTCCTGG Bphy_1170 1315800 - 1314676 - | transporter DMT superfamily protein TERM 1446 1314742 - 1314763 + g 100 -10.1 -4.86001 | opp_overlap 1314740, overlap 1314744 ATGCCAGAACCTATT CACGCCAGC GCAA GCTGGCGTC TTTTTGTGGGCTGGT TERM 1447 1314744 - 1314761 + g 89 -12.7 -4.05067 | opp_overlap 1314740, overlap 1314742 GCCAGAACCTATTCA CGCCAGC GCAA GCTGGCG TCTTTTTGTGGGCTG TERM 1448 1314859 - 1314883 + g 72 -11.4 -3.5394 | gap 1, overlap 1314848 TTGTGCGCCGTGGGT CGCTGGCGCCG CGTT TGGCGCC-GCG TTTGCCGGCGCGTTT TERM 1449 1315749 - 1315780 + g 100 -15.8 -4.62203 | opp_overlap 1315743 ACCAGCATAGCGCCA GGAGCAGCGCGCCG TAGC CGGCGCCCTCCTCC TTTTGATTGTTTCCA Bphy_1171 1317080 - 1315797 - | aminotransferase class-III TERM 1450 1316085 - 1316041 - G 72 -11.5 -3.53091 | gap 2 ACGCGCCCGTCGAAA CGC-GCCGCGATGCGCGC-CT CGATC AGCGCACCCATCGCAGCCGCG TTGCCGACGAGCCGC Bphy_1172 1318566 - 1317070 - | hypothetical protein Bphy_1173 1319573 - 1318575 - | hypothetical protein Bphy_1174 1320556 - 1319570 - | hypothetical protein TERM 1451 1319909 - 1319897 - G 70 -5.5 -4.20868 | overlap 1319899 CGTCGAAAAGAAGAA CAGCG GAT CGCTA TGCGCCCAGAAGGCG TERM 1452 1320563 - 1320547 - G 71 -3.7 -4.56597 | CCTGTGGTTCAAAAA TGTCG TCCATCG CGACA GCCTCCGTTCATGGC TERM 1453 1321158 - 1321129 - H 95 -11.3 -4.8048 | overlap 1321110 1321132 TTTCGACACGAAAAA CAGGCGCTCCCGC GAAG GGGAGCGCGCCTG AAGGTGGATCGGGTC TERM 1454 1321153 - 1321132 - H 74 -13 -3.00658 | overlap 1321129 CGACACGAAAAACAG GCGCTCCC GCGAAG GGGAGCGC GCCTGAAGGTGGATC TERM 1455 1321809 - 1321786 - g 91 -10.2 -4.62302 | gap 1, overlap 1321788 GAACAGTTCGAAAAA GCG-CCGCGCG CCA CGCGCGGACTC GATGCGATTCGCGCG TERM 1456 1322268 - 1322281 + G 70 -2.3 -4.71426 | AGCGCTGCTGAAAGC GCATC GGCC GAAGC TTTTCTTCCTCAACA Bphy_1175 1321540 - 1322946 + | transcriptional regulator Bphy_1176 1323730 - 1323026 - | carbonate dehydratase TERM 1457 1323895 - 1323857 - R 70 -4.5 -4.43859 | overlap 1323860 GAGAAGGCCATAAAA GAAGCCCCG-GCCGGAC GTGATCG GAGCGGCGCGGGGCT-C GACAAAAAGCTCGCC TERM 1458 1323893 - 1323860 - R 74 -7.3 -4.32669 | gap 1, overlap 1323857 AAGGCCATAAAAGAA GCCCCG-GCCGGAC GTGATCG GAGCGGCGCGGGGC TCGACAAAAAGCTCG TERM 1459 1323927 - 1323904 - R 76 -4.6 -4.82901 | gap 1 GGGGCTCGACAAAAA GCTCGCCTGTT CTC AAGAGGC-AGC CTCACGTTACGCGCG TERM 1460 1323997 - 1323970 - R 100 -24.2 -5.54192 | opp_overlap 1323965 AGCAATCGAAAAAAA CCCCGGTCGCCG GGTG CGGCGACCGGGG GAAGCTCTCTCGCGC Bphy_1177 1325320 - 1324265 - | hypothetical protein TERM 1461 1324826 - 1324807 - G 71 -4.2 -4.57569 | gap 1, overlap 1324808 1324809 CGATCGCGTGAAAAA GCCCGCCGC GCC GCAGCAG-C ACAAACGCCACGACC TERM 1462 1324883 - 1324832 - G 89 -13 -3.99324 | gap 1 CCGCAGCAGCACAAA CGCCACGACCGGCAGCGGCAACG ACAGCAA CAGTGCCGC-GCCGATCGTCACG AGCAGGTCGTCATGC Bphy_1178 1326193 - 1325342 - | hopanoid biosynthesis associated protein HpnK TERM 1463 1325895 - 1325882 - G 78 -3.8 -4.77036 | overlap 1325888 GGGCAGCAGGAAAAA GCGA AAGCCG TCGC GCACCATCCGGTCGC Bphy_1179 1327614 - 1326190 - | hopanoid biosynthesis associated radical SAM protein HpnJ Bphy_1180 1328887 - 1327667 - | hopanoid biosynthesis associated glycosyl transferase protein HpnI TERM 1464 1328961 - 1328985 + r 77 -12.2 -3.53224 | gap 1, opp_overlap 1328959 1328958 ACATAGACACAAGCG GCGAC-GGCTG TCAC CAGCCCGTCGC TTTGACGGGAACGTA Bphy_1181 1329330 - 1328971 - | hypothetical protein Bphy_1182 1330071 - 1329532 - | cytochrome B561 Bphy_1183 1330243 - 1330929 + | two component transcriptional regulator Bphy_1184 1330926 - 1332368 + | integral membrane sensor signal transduction histidine kinase Bphy_1185 1332595 - 1332801 + | hypothetical protein TERM 1465 1332989 - 1333003 + T 81 -12.8 -3.53091 | overlap 1332979 TTTGGCGCGCGCAGG CCGCGC AGC GCGCGG TTTACGCCGGCGCAT TERM 1466 1333023 - 1333063 + T 77 -12.3 -3.57144 | CGCCGGCGCATCGGC GCGCTGGCGCGCTCGAGGC CGC GGCACACGCGCGCGAGCGC TTTCGACATGGACGC Bphy_1186 1333749 - 1333297 - | nuclear protein SET TERM 1467 1333622 - 1333653 + g 72 -6.4 -4.22009 | gap 1, overlap 1333623 CCTCGTTCGATGCGC CGCGCGGCG-CGTCG CCA CGACGTCACCTCGCC TTTGTATTCGATGAT Bphy_1187 1334780 - 1333890 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Bphy_1188 1334879 - 1335775 + | LysR family transcriptional regulator Bphy_1189 1337120 - 1335765 - | integral membrane sensor signal transduction histidine kinase TERM 1468 1336182 - 1336205 + g 80 -5.2 -4.72272 | overlap 1336184 GATGCTCTCGATCAG CGCGTCCG GATTCACG CGGACGGG TTTTTCGTCGGCGCC Bphy_1190 1337863 - 1337117 - | two component transcriptional regulator TERM 1469 1337761 - 1337715 - G 73 -13.7 -2.83715 | TCGAGCACGATCAGA TCGGGCCGCTCGGCAG-CGAGCG CCG CGCGCATCTGCCG-GCCACCCGA CGCGAGCGTCGCGCG Bphy_1191 1338270 - 1337899 - | glutathione-dependent formaldehyde-activating GFA Bphy_1192 1338580 - 1338299 - | hypothetical protein TERM 1470 1338542 - 1338492 - G 80 -14.8 -3.14463 | gap 1 AACTTGCGCGAGGAA CGTGCGCTGGCGCACACAGGCGT GTCGTG ATG-CGATGTGCGCCAACGCACG GAGTACCGTTTGCCG Bphy_1193 1339863 - 1338799 - | diguanylate phosphodiesterase TERM 1471 1339444 - 1339412 - G 74 -4.8 -4.4648 | gap 1 AGCGCGACGAGAAAA GCATCTGG-CAACAG CATG CCGTAGTCCGGATGC ATCCAGCGGATCAAT TERM 1472 1339846 - 1339813 - G 87 -8.1 -4.77165 | overlap 1339818 1339821 1339837 CGCCTGAGAAGAAAA CGCAACAACGTTTCG CGCA CGAAACGTCGGCGCC GCACATGAGCGTTCC TERM 1473 1339841 - 1339818 - G 75 -11.8 -3.4724 | overlap 1339813 1339821 1339837 GAGAAGAAAACGCAA CAACGTTTCG CGCA CGAAACGTCG GCGCCGCACATGAGC TERM 1474 1339838 - 1339821 - G 73 -9.9 -3.84389 | overlap 1339818 1339813 1339837 AAGAAAACGCAACAA CGTTTCG CGCA CGAAACG TCGGCGCCGCACATG Bphy_1194 1340043 - 1340366 + | hypothetical protein Bphy_1195 1340781 - 1340440 - | hypothetical protein TERM 1475 1342901 - 1342857 - R 100 -13.4 -4.42238 | gap 1, opp_overlap 1342857 TGACCCGAATTAAAA CGCGTCCTCGCGCGGCGTGCC TCGC GGTGCGCCGCGCC-GTACGCG TATCATGCCGACTCA TERM 1476 1342857 - 1342901 + r 89 -17.8 -2.78816 | gap 1, opp_overlap 1342857 TGACCCGAATTAAAA CGCGTCCTCGCGCGGCGTGCC TCGC GGTGCGCCGCGCC-GTACGCG TATCATGCCGACTCA Bphy_1198 1344370 - 1342904 - | xylulokinase TERM 1477 1345162 - 1345127 - R 100 -17.6 -3.86015 | CATCGGCCGCACAAA CGCCAAGACCCCGC TTTTGAGG GCGGGGTCATGGCG ATGGATAAGGAGCCT TERM 1478 1347813 - 1347824 + r 71 -7.2 -4.2354 | AGGATCTGTTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 1479 1349981 - 1350003 + r 79 -5.4 -4.86731 | TCCGGTACCGTCATC CTCCACCGCT ATT GGCGGCGAAG TTTTCTTTCCGGACA TERM 1480 1350932 - 1350899 - R 73 -11.9 -3.14051 | gap 1, opp_overlap 1350905, overlap 1350905 TGAGTGCCAGGAATA GAA-AAAGCGCGCGAA ACA TCCGCACGCTTTCTTC ATAAGCTCTGGCAGC TERM 1481 1350925 - 1350905 - R 100 -11.1 -5.1244 | opp_overlap 1350905, overlap 1350899 CCAGGAATAGAAAAA GCGCGCGAA ACA TCCGCACGC TTTCTTCATAAGCTC Bphy_1200 1352912 - 1350990 - | hypothetical protein TERM 1482 1353166 - 1353153 - H 70 -3.7 -4.67173 | overlap 1353154 TAACTGAAAAAATAA TGCCG GTCC CGGCT GATAACCCGCGCGAT TERM 1483 1353641 - 1353652 + H 83 -5.8 -5.00884 | opp_overlap 1353641 GTCGCGATTCGAATA CACG TGAA CGTG TTTTTTCAAACGAAT Bphy_1201 1353832 - 1354809 + | hypothetical protein Bphy_1202 1355000 - 1356724 + | Pyrrolo-quinoline quinone TERM 1484 1356857 - 1356871 + F 74 -11.4 -3.55824 | overlap 1356855 CTGCTATGGCCCGAC TGGCCG CAT CGGCCA TATTTGTACATCATG Bphy_1203 1356959 - 1357534 + | hypothetical protein TERM 1485 1358088 - 1358031 - g 100 -22.8 -3.31144 | gap 2, overlap 1358009 1358032 GGCGGACTCGCACAA CGCGCGCGCGTAAGCGGCGACTGGCTCG TGCG CACGCC-GTCGCCGCTCACGT-CGCGCG ACGCGATGGCCGTCG TERM 1486 1358089 - 1358032 - g 100 -22.8 -2.58544 | overlap 1358009 1358031 GCGGACTCGCACAAC GCGCGCG-CGTAAGCGGCGACTGGCTCG TGCG CACGCC-GTCGCCGCTCACGTCGCGCGA CGCGATGGCCGTCGG TERM 1487 1358724 - 1358676 - g 77 -12.4 -3.60805 | gap 1, overlap 1358677 ATACTGGACGGCAAA GTGCGCGGACGC-CTCGTGGTCG ACGT CAACCGCTAGCGCATCCGCGCAT GCACTATCAAAATGC TERM 1488 1358723 - 1358677 - g 78 -15.9 -2.76162 | gap 1, overlap 1358676 TACTGGACGGCAAAG TGCGCGGACGC-CTCGTGGTCG ACGT CAACCGCTAGCGCATCCGCGCA TGCACTATCAAAATG Bphy_1204 1357731 - 1358711 + | quinone oxidoreductase Bphy_1207 1359317 - 1359604 + | hypothetical protein Bphy_1208 1360290 - 1359745 - | hypothetical protein TERM 1489 1360421 - 1360407 - R 81 -4.2 -5.09426 | GCGAACGCCAAAAAA TCCCTG CCA CAGCGA ATCGAACAGCCCCGC Bphy_1209 1361033 - 1360386 - | heat shock protein DnaJ domain-containing protein Bphy_1210 1361207 - 1362115 + | putative transport protein, YfdC-like protein TERM 1490 1362137 - 1362099 - f 74 -11 -3.53444 | gap 1, opp_overlap 1362136, overlap 1362100 CGATTGCGCCTGAAA TCGGC-GAGCGACGCTA GGCGCA TGGCGTCGCTCTGCCGC GTGGGATGCCGCGCT TERM 1491 1362136 - 1362100 - f 80 -14.5 -2.71924 | gap 1, overlap 1362099 GATTGCGCCTGAAAT CGGC-GAGCGACGCTA GGCGCA TGGCGTCGCTCTGCCG CGTGGGATGCCGCGC Bphy_1211 1362390 - 1363904 + | hypothetical protein TERM 1492 1363947 - 1363977 + F 100 -11.9 -5.21709 | overlap 1363949 GACGGACGTTGTAAC G-GGCCGGCCCGGCA CGC TGC-GGGCCGGCTTC TTTTTTCCTGTCGCC TERM 1493 1363949 - 1363974 + F 100 -16.9 -4.69962 | gap 1, overlap 1363947 CGGACGTTGTAACGG GCCGGCCCGGCA CGC TGC-GGGCCGGC TTCTTTTTTCCTGTC Bphy_1212 1364055 - 1364822 + | hypothetical protein Bphy_1213 1364803 - 1365120 + | high potential iron-sulfur protein Bphy_1214 1365257 - 1365922 + | hypothetical protein Bphy_1215 1365950 - 1366303 + | hypothetical protein TERM 1494 1366338 - 1366309 - T 79 -13.6 -3.08312 | overlap 1366296 AAGGCAGTGACGCAA TGAGCGGCACGC CGACGC GCTTGCCGCTCA AAGCTGCGGATCGAG Bphy_1216 1367598 - 1366336 - | phospholipase D/transphosphatidylase Bphy_1217 1367944 - 1367681 - | hypothetical protein Bphy_1219 1368466 - 1368254 - | hypothetical protein Bphy_1220 1369745 - 1368828 - | MscS mechanosensitive ion channel Bphy_1221 1369960 - 1371315 + | major facilitator transporter Bphy_1222 1371436 - 1371900 + | hypothetical protein Bphy_1223 1372149 - 1371919 - | hypothetical protein Bphy_1224 1372265 - 1372453 + | hypothetical protein TERM 1495 1372505 - 1372493 - f 82 -9.1 -4.46112 | opp_overlap 1372462 1372461 1372504 TTGCATCGAAACAAA GTGCG GCC CGCAC GGTTTGGAGAACCGC Bphy_1225 1372697 - 1373674 + | glycosyl transferase family protein TERM 1496 1373726 - 1373706 - T 100 -12.6 -5.44119 | opp_overlap 1373720 GTCAGGCGAAAAAAA GCGGCTCT ATGGA AGAGCCGC TTCCGGTACTTCATG Bphy_1226 1375059 - 1373764 - | major facilitator superfamily metabolite/H(+) symporter TERM 1497 1374841 - 1374797 - G 77 -12.1 -3.58522 | gap 1, overlap 1374835 ACCATCATCGCGAAA CGGCGGCCGCGCTTGTCGGC GAGACG GCCGAAGAAC-CAGCCGCCG ATCGGGCGCATCAGG TERM 1498 1375352 - 1375331 - R 100 -15.9 -5.38054 | opp_overlap 1375333 CTGCACAAACAAAAA GAGCCAGCC CGAA GGCTGGCTC TGGTGATGGATCGTC TERM 1499 1375333 - 1375350 + r 73 -12.7 -2.83164 | opp_overlap 1375331 GCACAAACAAAAAGA GCCAGCC CGAA GGCTGGC TCTGGTGATGGATCG Bphy_1227 1377130 - 1375394 - | SpoVR family protein TERM 1500 1376570 - 1376600 + g 80 -11.9 -3.68988 | GCCATAGGCCGCGTG CGCGATGACGAGG GCCTG CATCGTCATCGTG TTCTCTTCCATCAGA Bphy_1228 1378398 - 1377127 - | hypothetical protein TERM 1501 1378524 - 1378485 - R 83 -14.4 -3.14132 | gap 1, opp_overlap 1378497, overlap 1378510 TGCGCCTCGCAGGAA GCCCGCGCAAATCGGGT GAAGCGA ACCCG-TTTGCGCGGGG GTCGCGCTGCGCGAG Bphy_1229 1380462 - 1378540 - | putative serine protein kinase, PrkA TERM 1502 1380401 - 1380422 + g 73 -5.8 -4.36914 | overlap 1380402 GCGAGATACTCCTCG AGCGAGAG TTCCTC CTCTCGCG TTTTCTCGAAGCGGG Bphy_1230 1380713 - 1381138 + | hypothetical protein Bphy_1231 1382093 - 1381332 - | putative hydratase/decarboxylase TERM 1503 1381851 - 1381839 - G 85 -7.7 -4.60487 | overlap 1381843 CAGCACGCGGAAAAA CGAAC CGT GTTCG AGACGGGCCGGCGAC TERM 1504 1382353 - 1382327 - R 91 -7.3 -5.18371 | gap 1 GCTCAGAAAACAAAA GACGGGTG-CCT GGCG AGGACAGCCGTC CGGTGATGCTGCGTC TERM 1505 1382374 - 1382430 + r 81 -8.7 -4.2828 | opp_overlap 1382403, overlap 1382375 ATGCTGCGTCAATGC GCGGGC-CGACGCGGCGG-ATGTTGACGC AAG GCGGCG-CATGCCGCCGCA-CGAGCCCGG TTTTGGTGCGTCAGA TERM 1506 1382375 - 1382429 + r 73 -12.2 -3.16647 | opp_overlap 1382403, overlap 1382374 TGCTGCGTCAATGCG CGGGC-CGACGCGGCGG-ATGTTGACGC AAG GCGGCG-CATGCCGCCGCA-CGAGCCCG GTTTTGGTGCGTCAG TERM 1507 1382418 - 1382403 - R 73 -11.8 -3.06183 | opp_overlap 1382375 1382374 CGGATGTTGACGCAA GGCGGC GCAT GCCGCC GCACGAGCCCGGTTT Bphy_1232 1384228 - 1382441 - | methyl-accepting chemotaxis sensory transducer TERM 1508 1384465 - 1384432 - R 81 -8.8 -4.2687 | gap 1, overlap 1384406 1384425 1384433 TGTAAAAACTACAAA CTCGACGCGCGAGCG GCCAT CGCCCGCGCG-CAAC AGATGGGAGGACGGA TERM 1509 1384464 - 1384433 - R 73 -12.3 -3.15037 | gap 1, overlap 1384406 1384432 1384425 GTAAAAACTACAAAC TCGACGCGCGAGCG GCCAT CGCCCGCGCG-CAA CAGATGGGAGGACGG Bphy_1233 1385410 - 1384481 - | ribokinase TERM 1510 1384709 - 1384680 - G 76 -9.9 -4.07568 | gap 1, overlap 1384681 CGCGGCGCTTCAAAA TGCTGCGGCTCGGC GTC GCCGAGC-GCCGCG ACGACGCCTTGCGCG TERM 1511 1384708 - 1384681 - G 72 -13.4 -3.04398 | gap 1, overlap 1384680 GCGGCGCTTCAAAAT GCTGCGGCTCGGC GTC GCCGAGC-GCCGC GACGACGCCTTGCGC TERM 1512 1384946 - 1384971 + g 90 -16.1 -3.57144 | opp_overlap 1384915 GCGCGCGACGGCAAG CGCCGCGCGCA CGGC TGCGGGCGGCG TTTCCAGCTGGCAGA Bphy_1234 1386516 - 1385485 - | LacI family transcription regulator TERM 1513 1386014 - 1386030 + g 80 -5 -4.77438 | opp_overlap 1386008, overlap 1386016 TGCAGCAGATGGCGC GTCGCC AGATA GGCGCC TTTTTCATGATCGAT TERM 1514 1386260 - 1386241 - G 79 -4.2 -4.87786 | CGAATTGCAGAAAAA CACGCAGT AGCC ATTGCGCG CACAACCGTCTTCGA Bphy_1235 1387670 - 1386639 - | monosaccharide-transporting ATPase Bphy_1236 1389229 - 1387667 - | ABC transporter related TERM 1515 1388254 - 1388312 + g 84 -16.8 -2.86271 | gap 4, overlap 1388285 1388286 CATCGACGGGCGTGC CGATCTGCACGG-G-CGCTGGCGCCG-CGC CCG GCGTCGGCGCCAGCGATACCGTGCCGC-CG TCCTTCTGATCCGCG TERM 1516 1389514 - 1389568 + r 90 -16.9 -3.39895 | overlap 1389516 1389517 TGAGCGATTGATGAG GATTCGCGCGGCGGCGAGCGGCGCC TGTGC GACGCCACCCGCCGCCGTGCGGCTG TTACTTCGTGACGAG TERM 1517 1389516 - 1389566 + r 100 -19.5 -3.27029 | overlap 1389514 1389517 AGCGATTGATGAGGA TTCGCGCGGCGGCGAGCGGCGCC TGTGC GACGCCACCCGCCGCCGTGCGGC TGTTACTTCGTGACG TERM 1518 1389517 - 1389565 + r 100 -23 -2.55896 | overlap 1389516 1389514 GCGATTGATGAGGAT TCGCGCGGCGGCGAGCGGCGCC TGTGC GACGCCACCCGCCGCCGTGCGG CTGTTACTTCGTGAC Bphy_1237 1390525 - 1389569 - | periplasmic binding protein/LacI transcriptional regulator TERM 1519 1389679 - 1389716 + g 71 -14.1 -2.72344 | opp_overlap 1389670 CGAACACGGCCTGCT TGGCCGCGTACTGGTCA GCCG TGGCGAGCACGCGGCCG TCCTTCAGCATCGGC Bphy_1238 1391053 - 1391691 + | lysine exporter protein LysE/YggA Bphy_1239 1392717 - 1391740 - | magnesium and cobalt transport protein CorA TERM 1520 1392826 - 1392810 - R 72 -9.3 -3.65351 | opp_overlap 1392801 1392799, overlap 1392811 GGACCGTCATGCAAA GCCGCGC AGC GCGCGGT GTCAAGATGTTACGT TERM 1521 1392825 - 1392811 - R 73 -12.8 -2.78996 | opp_overlap 1392801 1392799, overlap 1392810 GACCGTCATGCAAAG CCGCGC AGC GCGCGG TGTCAAGATGTTACG Bphy_1240 1393184 - 1392906 - | hypothetical protein TERM 1522 1393307 - 1393273 - R 74 -11.3 -3.55444 | gap 1 CCGGCAGGTGTGAAA GCGCACGC-GGCGACG AGTG CGGCACCCGCGAGCGC TGCTGCAAAGACGGC TERM 1523 1393428 - 1393444 + r 77 -10.1 -3.9122 | overlap 1393423 CTGTGCCCACACGCC GCGAGGC AGC GCCTTGC TTGTTTGCACACCTG Bphy_1241 1393691 - 1393503 - | hypothetical protein Bphy_1242 1393894 - 1394562 + | hypothetical protein Bphy_1243 1395811 - 1394714 - | saccharopine dehydrogenase Bphy_1244 1396494 - 1396036 - | AsnC family transcriptional regulator Bphy_1245 1397511 - 1396645 - | LysR family transcriptional regulator TERM 1524 1398114 - 1398092 - g 76 -5.5 -4.46073 | gap 1, overlap 1398067 1398093 1398094 1398105 CCGGAACAGAAGAAA CTGGCGGACG AAAC CTTCCGCC-G TCAGCCGCCCGACGG Bphy_1246 1397681 - 1398196 + | hypothetical protein TERM 1525 1398229 - 1398250 + F 100 -17.3 -5.24531 | ACAGCTTCCGCACGA CGCCTGCCG TCAC CGGCAGGCG TTTTTTCTCGAGCAT Bphy_1247 1398366 - 1398803 + | hypothetical protein Bphy_1248 1399194 - 1398829 - | hypothetical protein TERM 1526 1398864 - 1398891 + g 77 -13.4 -3.36273 | gap 1 GCTCCACCGTGACTT CGCGTGGCACGGC CTT GCCG-GCCGCGTG TTCCTCTTCCAGCGA Bphy_1249 1400047 - 1399244 - | putative transmembrane lipoprotein Bphy_1250 1401195 - 1400125 - | LacI family transcription regulator TERM 1527 1400591 - 1400569 - G 74 -10.5 -3.72893 | opp_overlap 1400574 GAGCGCCCGATGAAA CGCGGCTTC GCGCT GACGCCGCG AACTGATGTGTTCGA TERM 1528 1400751 - 1400774 + g 70 -5.8 -4.20516 | opp_overlap 1400736 GCACGGCCGGAATCC CGCCGTCGCC CACG GGCCGCAGCG TTTCTTCGCTGACGC Bphy_1251 1402160 - 1401192 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1529 1401267 - 1401292 + g 80 -16.1 -2.80816 | GACCAGATTCTCCGC CGCGCAACGCG CCAT CGCGTGGCGCG TCTCGTGCGTCGCGG TERM 1530 1401434 - 1401484 + g 74 -2.5 -4.78753 | gap 2, overlap 1401458 GCAAGGCGGCGATCA GCGCG-TGCTCGTCGACG-GTCTGG CCG CGCGACGCGTTGATCAGGATCGCGC TTTTCTTCATCTTGC TERM 1531 1402092 - 1402056 - G 80 -15.2 -3.14344 | opp_overlap 1402048 CAGCGCGGCGACGAA CG-CGTCGTGCTGCGCGG CGT CCGC-CTGCACGACGTCG GCATGCTGCTTAAGA Bphy_1252 1403439 - 1402165 - | major facilitator transporter Bphy_1253 1404536 - 1403574 - | ribokinase-like domain-containing protein TERM 1532 1404114 - 1404084 - G 85 -16.9 -3.12351 | overlap 1404110 1404111 GCGCGCCATATGGAA CGCGAGTTCGCGC GAACT GCGCGAAATCGCG GGCGCGACGCCCGTC TERM 1533 1404218 - 1404243 + g 74 -11.1 -3.68222 | opp_overlap 1404190 1404217 1404216, overlap 1404218 CCTTGCGGAAATACT CGACGGCGGGA TCGC TGCCGTCGTCG TTCTTCGACTTCAGC TERM 1534 1404218 - 1404240 + g 71 -12.7 -2.94759 | opp_overlap 1404190 1404217 1404216, overlap 1404218 CCTTGCGGAAATACT CGACGGCGG GATCG CTGCCGTCG TCGTTCTTCGACTTC Bphy_1254 1405338 - 1404574 - | xylose isomerase domain-containing protein TERM 1535 1405079 - 1405037 - G 84 -12.7 -3.73775 | gap 2, opp_overlap 1405033 1405037 1405049 TGCAGCTTGACGAAA CGC-GCGCCCAGCGCCG-TCG CTT CGATCAGCGCCTGACGCAGCG CGGCTTCGTCGAGCG TERM 1536 1405417 - 1405406 - R 91 -7.2 -5.22312 | ACGGATATCAAAAAA GCGC GACT GCGC TTGAAGCAAATACTG Bphy_1255 1406383 - 1405469 - | LysR family transcriptional regulator TERM 1537 1407012 - 1407048 + G 81 -13 -3.6053 | overlap 1407009 CAAGAGCGCGATGGC CGTCGGCAGCGTGGTG CTGTT CGGCACGCTGTCGATG TTCCTTTATCCCGCG Bphy_1256 1406503 - 1407588 + | hypothetical protein TERM 1538 1407628 - 1407610 - f 81 -13.1 -3.52102 | opp_overlap 1407610 ACCTCACTCAGACAA GCCCCGC CGCGT GCGGGGC TTTTGTGCTTTCTGC TERM 1539 1407610 - 1407628 + F 100 -13.1 -4.64846 | opp_overlap 1407610 ACCTCACTCAGACAA GCCCCGC CGCGT GCGGGGC TTTTGTGCTTTCTGC TERM 1540 1407733 - 1407713 - f 81 -12.5 -3.53012 | GCTTCCGTGTGCAAA GGCGGCGCA CCC CACGCCGCC GACAACCGAATGAGG TERM 1541 1408186 - 1408147 - g 77 -8.6 -4.24745 | gap 1, opp_overlap 1408160 1408183, overlap 1408149 1408160 TACGAGGAACAGAAA GA-GGCCGCGAAAATCCGC GCG GCGGATTTCATCGACCATC GGATTCCGAAGTTCA TERM 1542 1408183 - 1408149 - g 77 -11.4 -3.71627 | opp_overlap 1408160, overlap 1408147 1408160 CGAGGAACAGAAAGA GGCCGCGAAAATCCGC GCG GCGGATTTCATCGACC ATCGGATTCCGAAGT TERM 1543 1408160 - 1408172 + G 71 -9.1 -3.73224 | opp_overlap 1408149 1408147 1408160 AAGAGGCCGCGAAAA TCCGC GCG GCGGA TTTCATCGACCATCG TERM 1544 1408172 - 1408160 - g 76 -9.1 -4.09511 | opp_overlap 1408160, overlap 1408149 1408147 AAGAGGCCGCGAAAA TCCGC GCG GCGGA TTTCATCGACCATCG Bphy_1257 1407757 - 1408494 + | glutathione S-transferase domain-containing protein TERM 1545 1408522 - 1408551 + F 74 -11.3 -3.53012 | gap 1, opp_overlap 1408543, overlap 1408523 TCGCACCGCCCTCGC CGCGGCGCGCACCC GAA GGGA-CGCGCCGCC TTTCAAACCGCCGCC TERM 1546 1408523 - 1408550 + F 80 -14.8 -2.71712 | gap 1, opp_overlap 1408543, overlap 1408522 CGCACCGCCCTCGCC GCGGCGCGCACCC GAA GGGA-CGCGCCGC CTTTCAAACCGCCGC TERM 1547 1409172 - 1409188 + G 100 -10.8 -5.14563 | opp_overlap 1409170 ACGTCCGCATACAGC GCGCCC ATCGC GGGCGC TTTTTTCGTCACCGA TERM 1548 1409375 - 1409396 + G 79 -11.5 -3.88291 | overlap 1409376 CGCGCTCGGCCTGCT GTGCGGCGC GGCG GCGCCGCAG TTTCTGCGGCTCATC TERM 1549 1409376 - 1409395 + G 79 -15 -2.92653 | overlap 1409375 GCGCTCGGCCTGCTG TGCGGCGC GGCG GCGCCGCA GTTTCTGCGGCTCAT Bphy_1258 1408632 - 1410365 + | chloride channel core TERM 1550 1410458 - 1410435 - f 81 -15.2 -2.62043 | overlap 1410432 1410431 CCTACAATGAATTGA CCCGGCGCCG GGCA CGGCCCCGGG CACGAAAGAAGCTGC Bphy_1259 1410547 - 1411884 + | hypothetical protein Bphy_1260 1412214 - 1412465 + | hypothetical protein Bphy_1261 1412553 - 1412783 + | hypothetical protein Bphy_1262 1412809 - 1413681 + | AraC family transcriptional regulator Bphy_1263 1413773 - 1414147 + | cupin 2 domain-containing protein Bphy_1264 1414792 - 1414172 - | TetR family transcriptional regulator Bphy_1265 1415016 - 1416206 + | RND family efflux transporter MFP subunit TERM 1551 1416257 - 1416277 + G 75 -9.7 -3.96624 | overlap 1416253 TCCGCGTGGGCGCTG CGCCATCAG GCG CTGGTGGTG TTTCTGATCGCGCTC Bphy_1266 1416203 - 1419325 + | acriflavin resistance protein Bphy_1267 1419328 - 1420821 + | RND efflux system outer membrane lipoprotein TERM 1552 1420834 - 1420861 + T 75 -10 -3.65046 | gap 1, overlap 1420826 1420837 TGAGCGACGCGTATC GAGTTATCCCCAG TTT CTGGGGATGA-TC TTGTTGAGATCGCCG TERM 1553 1420837 - 1420859 + T 79 -12.8 -3.40611 | overlap 1420834 GCGACGCGTATCGAG TTATCCCCAG TTT CTGGGGATGA TCTTGTTGAGATCGC TERM 1554 1421092 - 1421123 + T 88 -14.4 -3.54424 | opp_overlap 1421094, overlap 1421094 TCGACTGCACAAAAA AACGCGCCCGTGAT GTCC ACCACGGGCGCGTG TTTGCCGGCGTCGAA TERM 1555 1421121 - 1421094 - T 100 -19.2 -5.626 | opp_overlap 1421094 1421092 GACTGCACAAAAAAA CGCGCCCGTGAT GTCC ACCACGGGCGCG TGTTTGCCGGCGTCG TERM 1556 1421094 - 1421121 + T 90 -17 -3.35046 | opp_overlap 1421094, overlap 1421092 GACTGCACAAAAAAA CGCGCCCGTGAT GTCC ACCACGGGCGCG TGTTTGCCGGCGTCG Bphy_1268 1423510 - 1421150 - | 1A family penicillin-binding protein TERM 1557 1423757 - 1423798 + H 86 -14.3 -3.29144 | CGCTTGAATCGTGAT CGTTGCGCCGCCCGCGCAT CGTT ATGCGCAGCCGCCGCACCG TTGTGCGCCGGATCG TERM 1558 1424777 - 1424803 + G 72 -12.9 -3.06696 | opp_overlap 1424767 CGGAAGCCGCCGCGC GGGTTGCGGCC GCGAA GGCCGCCGCCC TCTCTTCCACAGGCG Bphy_1269 1424311 - 1424976 + | hypothetical protein Bphy_1270 1425521 - 1426201 + | phage shock protein A, PspA Bphy_1271 1426290 - 1427513 + | TPR repeat-containing protein TERM 1559 1427557 - 1427574 + T 100 -12.7 -4.72986 | opp_overlap 1427551 1427552 GGCGACAAACGCGAA GGGCTCC TCAC GGAGCCC TTTTTCATGCGCGTC Bphy_1272 1428290 - 1427610 - | TetR family transcriptional regulator TERM 1560 1428887 - 1428925 + G 79 -10.3 -4.07687 | gap 2, overlap 1428889 GGCGAGCGGACCGTT GTCGCG-TCCCG-CGATGC CGC GCATCGACGGGATCGGGTC TTTTAGCGGCAGGAT TERM 1561 1428889 - 1428923 + G 74 -11.5 -3.63744 | gap 2, overlap 1428887 CGAGCGGACCGTTGT CGCG-TCCCG-CGATGC CGC GCATCGACGGGATCGGG TCTTTTAGCGGCAGG Bphy_1273 1428453 - 1429934 + | putative flavin-binding monooxygenase-like protein Bphy_1274 1430353 - 1430237 - | hypothetical protein TERM 1562 1431296 - 1431242 - g 76 -9.9 -4.08216 | gap 1, opp_overlap 1431244 1431250 CGAGGGCGCCGAAAA CACGGCACGCGCCCAACGTGTGCGTG AAGG CACGCGCAGGATCGGCG-ATGTCGTG CATTCGACCGGTCAC Bphy_1275 1430631 - 1432043 + | methyl-accepting chemotaxis sensory transducer TERM 1563 1432098 - 1432075 - T 100 -11.6 -5.14965 | opp_overlap 1432067, overlap 1432044 ATCTTGATGAAAAAA GCCGGCGTCC TGGC GGGCGCCAGC CATCTGCATTGAATT Bphy_1276 1432949 - 1432131 - | ornithine carbamoyltransferase TERM 1564 1432425 - 1432412 - G 71 -8.1 -4.19587 | overlap 1432415 1432419 TGATGAAGAAAAATA CACGC AACG GCGTG GCACCAAGATCCAGT Bphy_1277 1433878 - 1432949 - | binding-protein-dependent transport systems inner membrane component Bphy_1278 1435038 - 1433875 - | spermidine/putrescine ABC transporter ATPase subunit TERM 1565 1435098 - 1435076 - R 85 -10.5 -4.29508 | opp_overlap 1435076 1435097 ATGTAGACGAACAAA GCCCCCGGC TGGAT ACCGAGGGC TTCATGATGATGCTT Bphy_1279 1436243 - 1435143 - | extracellular solute-binding protein TERM 1566 1436605 - 1436591 - H 84 -2.7 -5.44119 | TCCACCCGAAAAAAA CCTCG CTTCC CGCGG CGGGAAATCCGTGCA Bphy_1280 1436736 - 1438082 + | Mn2+/Fe2+ transporter TERM 1567 1438353 - 1438337 - g 75 -2.9 -4.77438 | overlap 1438338 ACCGATGAGGAAAAA CGCGC TATCTGG ACGCG CATCGAATGCGATGG Bphy_1281 1438199 - 1438402 + | hypothetical protein TERM 1568 1438456 - 1438514 + T 100 -28.7 -3.14344 | opp_overlap 1438473, overlap 1438459 1438473 TTCGATCGGTTACCT -GGATGTGCAATGAAAAACGCCGGCTCTT GAC GAG-GCCGGCGTTTTTCATTGCACATCCG TTCATGCAAACGATG TERM 1569 1438459 - 1438510 + T 100 -29.2 -2.56596 | gap 1, opp_overlap 1438473, overlap 1438456 1438473 GATCGGTTACCTGGA TGTGCAATGAAAAACGCCGGCTCTT GAC GAG-GCCGGCGTTTTTCATTGCACA TCCGTTCATGCAAAC TERM 1570 1438473 - 1438496 + T 95 -11 -4.86621 | gap 1, opp_overlap 1438473, overlap 1438459 1438456 ATGTGCAATGAAAAA CGCCGGCTCTT GAC GAG-GCCGGCG TTTTTCATTGCACAT TERM 1571 1438496 - 1438473 - T 95 -10.3 -4.86621 | gap 1, opp_overlap 1438473 1438459 1438456 ATGTGCAATGAAAAA CGCCGGCTCT TGACG AG-GCCGGCG TTTTTCATTGCACAT Bphy_1282 1439178 - 1438531 - | OmpW family protein Bphy_1283 1440462 - 1439272 - | 2-nitropropane dioxygenase NPD TERM 1572 1440577 - 1440551 - R 90 -7.9 -4.97158 | opp_overlap 1440552 1440553, overlap 1440552 1440553 TGAGATCAAACAAAA CCCGCGTGTCG GTTAT CGACACGCGCT TTCATTGCGTTTCAT TERM 1573 1440576 - 1440552 - R 74 -11.4 -3.5721 | opp_overlap 1440552 1440553, overlap 1440551 1440553 GAGATCAAACAAAAC CCGCGTGTCG GTTAT CGACACGCGC TTTCATTGCGTTTCA TERM 1574 1440552 - 1440576 + r 86 -12.1 -3.98173 | opp_overlap 1440552 1440551 1440553, overlap 1440553 GAGATCAAACAAAAC CCGCGTGTCGG TTA TCGACACGCGC TTTCATTGCGTTTCA TERM 1575 1440575 - 1440553 - R 83 -14.9 -2.73241 | opp_overlap 1440552 1440553, overlap 1440552 1440551 AGATCAAACAAAACC CGCGTGTCG GTTAT CGACACGCG CTTTCATTGCGTTTC TERM 1576 1440553 - 1440575 + r 84 -15.6 -2.98181 | opp_overlap 1440553 1440552 1440551, overlap 1440552 AGATCAAACAAAACC CGCGTGTCGG TTA TCGACACGCG CTTTCATTGCGTTTC Bphy_1284 1442085 - 1440649 - | aldehyde dehydrogenase TERM 1577 1441153 - 1441125 - G 77 -13.1 -3.35813 | GCGTAGCCGAAGCAA GCGGACCGAGACG CGT CGTCTCGACGCGC GGATCGCCCGCGACG TERM 1578 1442104 - 1442114 + r 73 -3.2 -4.73614 | overlap 1442096 TTGCGTCCTGTCTCC TGGA TAG TCCG TTTATTTTACTCATG TERM 1579 1442227 - 1442208 - R 100 -13.6 -5.01042 | opp_overlap 1442208 AACCCAAATGAAAAA CCCGCTTC TTAC GAAGCGGG TTTGAAGGATTTGCA TERM 1580 1442208 - 1442227 + r 83 -13.6 -3.5936 | opp_overlap 1442208 AACCCAAATGAAAAA CCCGCTTC TTAC GAAGCGGG TTTGAAGGATTTGCA Bphy_1285 1443845 - 1442253 - | ABC transporter related TERM 1581 1443342 - 1443362 + g 75 -12.5 -3.53012 | opp_overlap 1443338 1443336 CTTCGAGAACAGCGC CTGCGCGAG CAG CACGCGCAG TTTCCAGCCGGGGGC Bphy_1286 1444834 - 1443941 - | 2-hydroxy-3-oxopropionate reductase Bphy_1287 1445017 - 1445226 + | hypothetical protein TERM 1582 1445336 - 1445308 - T 100 -19.7 -5.14965 | opp_overlap 1445308 ACGCGCATGAAAAAA GCTGCATCCGATG TAA CACCGGATGCAGC TTCTGACGTGCCCAC TERM 1583 1445308 - 1445336 + T 93 -17.5 -3.32844 | opp_overlap 1445308 ACGCGCATGAAAAAA GCTGCATCCGATG TAA CACCGGATGCAGC TTCTGACGTGCCCAC Bphy_1288 1446525 - 1445431 - | basic membrane lipoprotein Bphy_1289 1447517 - 1446588 - | inner-membrane translocator Bphy_1290 1448601 - 1447549 - | inner-membrane translocator TERM 1584 1448584 - 1448551 - G 72 -6.7 -4.208 | gap 1, overlap 1448544 1448536 1448571 GCTGAAAATCAGAAA GCCGATGGCCAGCG TAAGGAG CGC-GGCGATCAGC GGCACGGCAAGCTGC Bphy_1291 1450324 - 1448705 - | ABC transporter related TERM 1585 1449757 - 1449790 + g 70 -13.9 -2.57132 | gap 1, overlap 1449756 CTTGCGGCGTGAGCA CCGACGTCGGCTCGTC CAT GATGAGCAGACG-CGG ATTCTGCAACAGACA TERM 1586 1450353 - 1450374 + H 77 -7.9 -4.28774 | overlap 1450349 1450354 1450366 ACGCGTGTGGTCGGC GGCACGCTG CGTC CGGCGTGCA TTTTCGCTTGAATGC TERM 1587 1450536 - 1450500 - H 100 -17.4 -4.09685 | gap 1, opp_overlap 1450511 GTCGAGCCGCCAAAA TTCCCGCAAAGCCGCGC CGCT GCGCGG-TTTGCGGGTA TCCCTCCCTTGACGG TERM 1588 1450511 - 1450526 + H 77 -11.8 -3.5944 | opp_overlap 1450500 AAAATTCCCGCAAAG CCGCGC CGCT GCGCGG TTTGCGGGTATCCCT Bphy_1292 1450628 - 1451557 + | LysR family transcriptional regulator TERM 1589 1451574 - 1451605 + T 90 -10.9 -4.39989 | gap 1, opp_overlap 1451558, overlap 1451579 GCACAGGCACTACTG TGCA-GGCGGCGGT CTCGA ACCGCCGCTTTGCG TTTTAGTGCTTTGCT TERM 1590 1451579 - 1451599 + T 95 -14 -3.94846 | overlap 1451574 GGCACTACTGTGCAG GCGGCGGT CTCGA ACCGCCGC TTTGCGTTTTAGTGC Bphy_1293 1453029 - 1451620 - | amidohydrolase Bphy_1294 1453650 - 1454003 + | hydroxyisourate hydrolase Bphy_1295 1454234 - 1455424 + | hypothetical protein TERM 1591 1455463 - 1455489 + T 100 -10.1 -5.76633 | gap 1 TCGGTTCTTCACGGT CGGGCTGTTCGC GAAT GCGG-CGGCCCG TTTTTTTCTGTCTAC TERM 1592 1456009 - 1455982 - T 100 -12.8 -6.12458 | CAAAAAAACAAAAAA CCCATCGCAGAT CTCC ATCCGCAATGGG CTTCCGAGCATCAAG Bphy_1297 1456557 - 1456048 - | ureidoglycolate hydrolase Bphy_1298 1457567 - 1456554 - | allantoicase Bphy_1299 1458177 - 1457656 - | hypothetical protein Bphy_1300 1459127 - 1458174 - | urate catabolism protein TERM 1593 1459261 - 1459234 - R 78 -9.1 -4.1899 | overlap 1459235 CCAGTGTAGCGAAAA CGCCCGGATGC GCCCAT ACACCCGGGCA GATAGTGCATGTCAG Bphy_1301 1460130 - 1459273 - | Asp/Glu/hydantoin racemase Bphy_1302 1461669 - 1460173 - | permease for cytosine/purines uracil thiamine allantoin TERM 1594 1461108 - 1461096 - G 70 -5.5 -4.30995 | CGTTCCAGAAAACAA GTGCC TGC AGCAC CCACAGCAGCATGAA Bphy_1303 1462768 - 1462052 - | GntR family transcriptional regulator TERM 1595 1463064 - 1463048 - R 72 -9.4 -3.68767 | opp_overlap 1463048, overlap 1463044 ATACTTGAAAATTAA GGCGAG CCGGC CTCGCC TCTATGCATCGCGAC Bphy_1304 1464020 - 1463094 - | muramoyltetrapeptide carboxypeptidase Bphy_1305 1464675 - 1464034 - | CMP/dCMP deaminase zinc-binding TERM 1596 1464158 - 1464136 - G 85 -4.7 -5.00616 | opp_overlap 1464137 1464141, overlap 1464137 GCGGTCTGCAAAAAA CGCGCGCAG AGCGG CCGCGCACT CCTCTTCGAGCACGC TERM 1597 1464584 - 1464570 - G 87 -5.6 -5.00616 | overlap 1464571 1464573 1464574 CGCGCTCGGAAAAAA TGACGG CGG CCGTCG TCAGGCAGGGCCCGA Bphy_1306 1465073 - 1464672 - | hypothetical protein Bphy_1307 1465166 - 1465480 + | hypothetical protein Bphy_1308 1465635 - 1466288 + | 17 kDa surface antigen TERM 1598 1466573 - 1466521 - f 71 -7 -4.25104 | gap 2, opp_overlap 1466539 1466557 1466558, overlap 1466535 CGCGCGCGACGAAAA TCCGCGCAACGAGACCCGCGATCCAC ATC GTG-ATTGCGGGCATCGTGGC-CTGA TCGCGCTCAGGCGCG Bphy_1309 1466731 - 1468002 + | radical SAM domain-containing protein TERM 1599 1468818 - 1468800 - g 70 -5.8 -4.28774 | TCAGCGAAGCGAAAA GCGGCGCG CAG CGGGTCGC ACAGGCGAGCAGCGT Bphy_1310 1468019 - 1469491 + | phage SPO1 DNA polymerase-related protein Bphy_1311 1469516 - 1470055 + | GCN5-related N-acetyltransferase TERM 1600 1470071 - 1470090 + T 78 -9.2 -4.07687 | opp_overlap 1470073, overlap 1470073 GCACCGGCAATGAAA AAGGGCGC CGCA GCGCCCTC TTTTCAACCCGGCCT TERM 1601 1470088 - 1470073 - T 100 -11.8 -4.86621 | opp_overlap 1470073 1470071 ACCGGCAATGAAAAA GGGCGC CGCA GCGCCC TCTTTTCAACCCGGC TERM 1602 1470073 - 1470088 + T 81 -11.8 -3.63744 | opp_overlap 1470073, overlap 1470071 ACCGGCAATGAAAAA GGGCGC CGCA GCGCCC TCTTTTCAACCCGGC Bphy_1312 1471688 - 1470105 - | GMP synthase, large subunit TERM 1603 1471756 - 1471726 - R 72 -9.7 -3.72588 | gap 1, opp_overlap 1471726 1471728 GAACGGATAGGGAAA GCCGCGCGTGTCGC ATGT GCGACAGG-ACGGC GTTGTCATTAAAACG Bphy_1313 1472725 - 1471901 - | hypothetical protein Bphy_1314 1474192 - 1472732 - | inosine-5'-monophosphate dehydrogenase TERM 1604 1474316 - 1474340 + H 71 -7.1 -4.15669 | overlap 1474317 1474333 1474333 GTCCGATTTCGGTTT TGCGTTCGGGT CGG GTTCGAACGCG TTTCGTTTGTCCATT Bphy_1315 1474486 - 1475460 + | hypothetical protein TERM 1605 1475496 - 1475537 + T 95 -15.3 -3.66356 | gap 1, opp_overlap 1475505, overlap 1475505 CCGATTCAGGCGGCA CGAAGAAAAGGCGCACCG CGTGATA CGGTGCGCCTTT-CGTCG TTTGGCATTGCAGGT TERM 1606 1475505 - 1475529 + T 100 -14.3 -3.8901 | opp_overlap 1475505, overlap 1475496 GCGGCACGAAGAAAA GGCGCACCG CGTGATA CGGTGCGCC TTTCGTCGTTTGGCA TERM 1607 1475529 - 1475505 - T 100 -15 -4.71426 | opp_overlap 1475496 1475505 GCGGCACGAAGAAAA GGCGCACCGC GTGAT ACGGTGCGCC TTTCGTCGTTTGGCA Bphy_1316 1475897 - 1475565 - | hypothetical protein Bphy_1317 1476283 - 1475894 - | cyclase/dehydrase Bphy_1318 1476463 - 1476909 + | SsrA-binding protein Bphy_1319 1477880 - 1476948 - | band 7 protein Bphy_1320 1478423 - 1477971 - | hypothetical protein TERM 1608 1478445 - 1478465 + r 93 -14 -3.89346 | opp_overlap 1478445 CTCCACAAAGCAAAA CACCCCGG AGCTA CCGGGGTG TTTATAGCATGAAGC TERM 1609 1478465 - 1478445 - R 100 -14 -4.61873 | opp_overlap 1478445 CTCCACAAAGCAAAA CACCCCGG AGCTA CCGGGGTG TTTATAGCATGAAGC Bphy_1321 1480948 - 1478543 - | phosphoenolpyruvate synthase TERM 1610 1479299 - 1479272 - G 70 -11.2 -3.35679 | opp_overlap 1479280 1479295, overlap 1479276 CTTGTCGACGTAGAA CGCACGCGGCGA CGCG TGACCGCGCGCG ACGCTTTCGACGGCC TERM 1611 1479280 - 1479303 + g 72 -11.6 -3.54638 | opp_overlap 1479272 1479276, overlap 1479295 CGTAGAACGCACGCG GCGACGCGTG ACCG CGCGCGACGC TTTCGACGGCCTTCT TERM 1612 1479926 - 1479965 + g 81 -16.4 -2.71364 | GCTCTTCACCGTTTC CGGACGCGCCTGCAAGAT GAAG ATCTTGCCGTCGCGGCCG TCCTTGCCCCACTCG TERM 1613 1480986 - 1480973 - H 84 -2.3 -5.43866 | TAAGTGTGAAAAAAA TGCGC GATT GCGTA AGTGGGCTCGAACAC TERM 1614 1481282 - 1481266 - H 78 -9.3 -3.96148 | opp_overlap 1481274, overlap 1481267 CTGTCGGACGAGAAA TGCGCCG CGA CGGCGCC CGCGGCTTGCCGCAC TERM 1615 1481281 - 1481267 - H 74 -12.8 -2.97475 | opp_overlap 1481274, overlap 1481266 TGTCGGACGAGAAAT GCGCCG CGA CGGCGC CCGCGGCTTGCCGCA Bphy_1322 1481326 - 1482159 + | hypothetical protein Bphy_1323 1482985 - 1482185 - | tRNA/rRNA methyltransferase (SpoU) TERM 1616 1483033 - 1483021 - R 100 -10.5 -5.08255 | opp_overlap 1483021 ACGGTGAAAAGAAAA GCGCC GGA GGCGC TTGATGGGTTGGTGC Bphy_1324 1483802 - 1483053 - | ribonuclease H TERM 1617 1483547 - 1483578 + g 70 -2.2 -4.59773 | AATACGCCAGCGCGC GCTCGATGATCT TCTCGTAC AGTTCGTCGCGC TTTTTCGCCGTCAGC TERM 1618 1483768 - 1483797 + g 85 -17.1 -3.14132 | gap 1 TTCGCAGCTGTCTTG CGGCGCGGCGCGGC CGT GCC-CGCCGCGCGG TTCATGGACGCCCCC Bphy_1325 1484968 - 1483799 - | lipid-A-disaccharide synthase Bphy_1326 1485760 - 1484972 - | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TERM 1619 1485165 - 1485155 - G 72 -8.2 -4.07568 | overlap 1485139 CGCGTCCGCCGAAAA GCCG CGG CGGC GCAACCCTTCGACAT Bphy_1327 1486390 - 1485929 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 1620 1486485 - 1486525 + r 100 -21.2 -5.44721 | gap 1 CTGCCGCCCGTTCCT GTGCTGGCTGCGTGCGGCC TGTC GGCCACACGC-GCCAGCGC TTTTTTTCCCGTCGT Bphy_1328 1487636 - 1486560 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Bphy_1329 1488273 - 1487737 - | outer membrane chaperone Skp (OmpH) Bphy_1330 1490627 - 1488315 - | outer membrane protein assembly complex, YaeT protein Bphy_1331 1492081 - 1490693 - | membrane-associated zinc metalloprotease TERM 1621 1492116 - 1492084 - R 79 -12.7 -3.31792 | TCAGCAGGTTCATAA TCGCCTCACTGGACG GCG CGTTCCGTAAGGCGA GCGCCCGCCGGCAAT Bphy_1332 1493294 - 1492089 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Bphy_1333 1494138 - 1493317 - | phosphatidate cytidylyltransferase TERM 1622 1493751 - 1493724 - G 71 -9.8 -3.77831 | CCAGCAACAGGGAAA GCACGAACGGCA CACC CGCCATCCGCGC CGCCACGAGCGCATG TERM 1623 1494113 - 1494128 + g 77 -4.6 -4.62069 | overlap 1494114 GCCAGCAGAACGATC GCCGTG ATGA CACGGG TTTTTAGCATGGAAG Bphy_1334 1494914 - 1494132 - | undecaprenyl diphosphate synthase Bphy_1335 1495546 - 1494986 - | ribosome recycling factor TERM 1624 1495162 - 1495176 + g 74 -11.4 -3.67417 | GGCGCAGGTTGCGCA CGGCCA CCT TGGCCG TTTCACCTTCGCTCT Bphy_1336 1496352 - 1495639 - | uridylate kinase TERM 1625 1496484 - 1496450 - R 71 -10.7 -3.54459 | GCAAGCGCCGCCAAA TTGACGCGCGTCGAC GATCG GTCGAAGCGTGCCAA CCGGGCGACCGCAAC Bphy_1337 1497477 - 1496596 - | translation elongation factor Ts TERM 1626 1497545 - 1497557 + r 72 -4.7 -4.67607 | overlap 1497543 ACAGCATTTCGTTTC CGCGC AGC GCACG TTTATTTCTTCGAGC TERM 1627 1497647 - 1497627 - R 100 -9 -5.47218 | gap 1, opp_overlap 1497627 CGCGACTTAAAAAAA GGGGGC-CT ATAG AGAGCCCCC TTTTTTGCCGGACAC TERM 1628 1497627 - 1497647 + r 100 -9 -5.00616 | gap 1, opp_overlap 1497627 CGCGACTTAAAAAAA GGGGGC-CT ATAG AGAGCCCCC TTTTTTGCCGGACAC Bphy_1338 1498423 - 1497671 - | ribosomal protein S2 Bphy_1339 1498842 - 1499654 + | methionine aminopeptidase, type I TERM 1629 1500784 - 1500800 + G 70 -13.7 -2.57132 | opp_overlap 1500762 1500776, overlap 1500783 GTCAAAGGTCTGTCG GCGCGCA CCC TGCGCGC GTTGTACAACGCGCG TERM 1630 1501543 - 1501515 - g 71 -12.4 -3.17723 | GCACTCGGAACTGAA GCAGCGCCAGGA AGAAG CCCTTGCGCTGC TGCGGCTCGAAACGG TERM 1631 1501577 - 1501556 - g 72 -11.5 -3.53012 | overlap 1501569 1501570 TGCTGCGGCTCGAAA CGGTGCCCG AAAA CGCGCACCG TGCGCTGTGGGACAA Bphy_1340 1499680 - 1502259 + | UTP-GlnB uridylyltransferase, GlnD TERM 1632 1502412 - 1502383 - g 75 -9.2 -4.03234 | overlap 1502384 1502400 GCCCCGGCAGACAAA CCCGCTGCGCAG AGGAAG CCGCGCAGCGAC GCCGGTTCGGCGGCG TERM 1633 1502411 - 1502384 - g 71 -12.7 -3.01726 | overlap 1502383 1502400 CCCCGGCAGACAAAC CCGCTGCGCAG AGGAAG CCGCGCAGCGA CGCCGGTTCGGCGGC TERM 1634 1502509 - 1502475 - g 93 -14.3 -3.97368 | gap 1, overlap 1502496 1502497 GGGCGAAGGGACAAA GCGC-CCGGCCACG AGGAGCAA CGCGGCCGGCGCGC CGGGGGAGCGGCGCG TERM 1635 1502768 - 1502802 + G 77 -13.5 -3.32844 | gap 1 GTCCGTCGCGCAGCG GCGCGGCGTCGCGTGC TGGC GAACGCG-CACCGCGC TTCTCCCGTGACGAC TERM 1636 1503504 - 1503463 - g 72 -3.5 -4.68424 | overlap 1503465 1503499 GAATGGATCGAAAAA GGCTGGGTTACCGTCGACG GCGT CGTCGTCGATAAGCTGGGC ACGAAGGTCCGCCCC Bphy_1341 1502266 - 1504140 + | RNA-binding S4 domain-containing protein TERM 1637 1504169 - 1504194 + T 77 -11.9 -3.50447 | opp_overlap 1504174, overlap 1504174 CTGTCTTATGCAAAC AAAAAGCCCGC ATCC GCGGGCTTTTC TTATATCGAAGTTCG TERM 1638 1504189 - 1504174 - T 100 -11.8 -5.30616 | opp_overlap 1504174 1504169 TTATGCAAACAAAAA GCCCGC ATCC GCGGGC TTTTCTTATATCGAA TERM 1639 1504174 - 1504189 + T 100 -11.8 -4.84311 | opp_overlap 1504174, overlap 1504169 TTATGCAAACAAAAA GCCCGC ATCC GCGGGC TTTTCTTATATCGAA Bphy_1342 1504747 - 1504214 - | peptide deformylase Bphy_1343 1506795 - 1504744 - | DNA ligase, NAD-dependent TERM 1640 1505520 - 1505479 - G 76 -9.4 -4.07568 | gap 2, opp_overlap 1505480, overlap 1505481 CTGCGCCGGGCAAAA CAGGCCGCCCGAACAGCGCG CGAT CGC-CTCGTCGGGCAGCC-G TTCGATCGCGGAGCC TERM 1641 1505519 - 1505481 - G 81 -13.1 -3.63744 | gap 1, opp_overlap 1505480, overlap 1505479 GCGCCGGGCAAAACA GGCCGCCCGAACAGCGCG CGAT CGC-CTCGTCGGGCAGCC GTTCGATCGCGGAGC TERM 1642 1506005 - 1505966 - G 95 -12.8 -4.20783 | gap 1, opp_overlap 1505966, overlap 1505967 ACCTTATGGAAGAAA CCGAGCACGCCTTCGGCGC CCT GCACC-ACGGCGCGCTCGC TGTTCACGGGCAAGC TERM 1643 1506004 - 1505967 - G 85 -16.3 -3.11988 | gap 1, opp_overlap 1505966, overlap 1505966 CCTTATGGAAGAAAC CGAGCACGCCTTCGGCGC CCT GCACC-ACGGCGCGCTCG CTGTTCACGGGCAAG Bphy_1344 1507047 - 1507877 + | hypothetical protein TERM 1644 1507974 - 1507944 - T 77 -8.2 -4.35926 | opp_overlap 1507944, overlap 1507947 AGCCCAAACTGAAAA CCACCTGAAGCAAC GAC GGTGCATCAGGCAG TTTATGGGTGGAAGC Bphy_1345 1509257 - 1508022 - | ZipA FtsZ-binding region TERM 1645 1509096 - 1509125 + g 77 -13.5 -3.30124 | CTCGATGAAGGGGCT CTGCTCGTCCTGG TCCT CCCGGGCGAGCGG TTCTGCCGCATCGGC TERM 1646 1509432 - 1509390 - R 79 -13.3 -3.14211 | ATTCTGTTTCAGCAA CACCTGCACGCGGCCCGGC ATGAG GCCGGACGACGCACGGGTG GACGTTTAAACGATA Bphy_1346 1512956 - 1509438 - | chromosome segregation protein SMC TERM 1647 1510522 - 1510579 + g 81 -16.3 -2.67428 | gap 2, overlap 1510526 GCCATGTTGCGTGCT GCGAAGCGCGCATCGGTGGCGGCGCGG TCGAGC TCGCG-CGC-GCCGTTGCGCGCATTGC TCAGTTCTTCGTCGA TERM 1648 1510526 - 1510575 + g 71 -12.1 -3.25169 | gap 2, overlap 1510522 TGTTGCGTGCTGCGA AGCGCGCATCGGTGGCGGCGCGG TCGAGC TCGCG-CGC-GCCGTTGCGCGCA TTGCTCAGTTCTTCG TERM 1649 1511634 - 1511654 + g 85 -16.9 -3.14344 | overlap 1511627 CTCGGCAAGCTGCAT GCGCAGCTC TTC GAGCTGCGC TTCATCCGGCGCATC TERM 1650 1513096 - 1513051 - R 79 -12.5 -3.33261 | gap 1 CGGCAAGCGGCACAA CGTAGCGCGAGCCCGCTGCG ATTCCGG CGCCGCGG-CGCGCCCTACG CTGCACCGCTGGCCA Bphy_1347 1514124 - 1513123 - | hypothetical protein TERM 1651 1515427 - 1515409 - g 76 -9.5 -4.08216 | overlap 1515392 GCACGTGCGCGAAAA CCGCGCG ATGTA CGCGCAG AAGTTTTCGACCGTG Bphy_1348 1514417 - 1515721 + | aminotransferase class I and II TERM 1652 1515987 - 1515965 - g 71 -7.6 -4.17048 | opp_overlap 1515974 CGTCGCGGAAAAGAA GGATGGCGAC TGG GTCGTCAACC AGTGGTTGAAGAAGG Bphy_1349 1515816 - 1516643 + | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Bphy_1350 1516643 - 1517014 + | arsenate reductase and related TERM 1653 1517056 - 1517077 + F 100 -13.7 -5.05782 | CCGTACCTATGTTGT TGCCGGCCT TCCT GGGCCGGCA TTTTTTCACCTGAGT Bphy_1351 1517107 - 1518246 + | succinyl-diaminopimelate desuccinylase Bphy_1352 1518262 - 1519149 + | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific TERM 1654 1519175 - 1519218 + F 100 -25.4 -4.07568 | opp_overlap 1519150, overlap 1519176 1519178 CGGCTGATGGCTGCC TCGCACGACGCACGGTGCCT GTCT GGGCACCGTGCGTCGTGTGC TTTTGGGCGCCCGCA TERM 1655 1519176 - 1519217 + F 100 -28.9 -3.04398 | opp_overlap 1519150, overlap 1519175 1519178 GGCTGATGGCTGCCT CGCACGACGCACGGTGCCT GTCT GGGCACCGTGCGTCGTGTG CTTTTGGGCGCCCGC TERM 1656 1519178 - 1519215 + F 100 -27.9 -3.08032 | opp_overlap 1519150, overlap 1519176 1519175 CTGATGGCTGCCTCG CACGACGCACGGTGCCT GTCT GGGCACCGTGCGTCGTG TGCTTTTGGGCGCCC TERM 1657 1520823 - 1520878 + G 80 -14.8 -3.08812 | opp_overlap 1520823, overlap 1520823 1520853 1520854 ATCGTACGAGATAGA CCGCAGCGAGTATC-GCAACGCGCCG GCGCTG CGGCGCG-TGCTGATGCACGTTGCGC GTTTGTTCGCGCCGA TERM 1658 1520823 - 1520879 + G 95 -14.6 -4.15222 | gap 3, opp_overlap 1520823, overlap 1520823 1520853 1520854 ATCGTACGAGATAGA C-CGCAGCGAGTATC-GCAACGCGCCG GCGCTG CGGCGCG-TGCTGATGCACGTTGCGCG TTTGTTCGCGCCGAT Bphy_1353 1519465 - 1520901 + | phospholipase D/transphosphatidylase Bphy_1354 1521396 - 1520908 - | glutathione peroxidase Bphy_1355 1521523 - 1523463 + | ABC transporter related TERM 1659 1523705 - 1523726 + G 76 -9.3 -4.10161 | opp_overlap 1523695 GAGCACGGCCGACCG CGTGGCGGG ACGC CCCGGCGCG TTTTACCGGCTCGTG Bphy_1356 1523520 - 1524608 + | L-carnitine dehydratase/bile acid-inducible protein F Bphy_1357 1524908 - 1524645 - | hypothetical protein Bphy_1358 1526424 - 1525048 - | DNA repair protein RadA TERM 1660 1525423 - 1525375 - G 80 -14.6 -3.06501 | gap 2, opp_overlap 1525373 1525370 1525372 CACATCCTGATCGAA GCACGCGATGCCTGCGTGCCGGTG CAG CAC-GGCGAGCAG-CATCGCGAGC CGGTTCTGTTCGAGA Bphy_1359 1527590 - 1526499 - | alanine racemase TERM 1661 1527356 - 1527344 - G 72 -3.3 -4.71426 | CCTCCAGCAACAAAA TCGGC CCC GCCCA CCCCAATTCACGCAA TERM 1662 1527664 - 1527680 + H 74 -7.3 -4.33274 | GATCAAGGATTCTGC TAGTCGG GAT TCGACTA TTTTCATGATATAAA Bphy_1360 1527789 - 1529096 + | major facilitator transporter TERM 1663 1529727 - 1529710 - g 71 -9.8 -3.72576 | GCGGTGCTGATGAAA GGCGGC CATCTC GCCGCC ACCGACAGCCCCGAC Bphy_1361 1529176 - 1529982 + | phosphomethylpyrimidine kinase Bphy_1362 1531027 - 1530011 - | hypothetical protein Bphy_1363 1532049 - 1531024 - | phage SPO1 DNA polymerase-related protein Bphy_1364 1532530 - 1532036 - | ribosomal-protein-alanine acetyltransferase Bphy_1365 1533366 - 1532527 - | peptidase M22 glycoprotease TERM 1664 1532972 - 1533005 + g 72 -11 -3.54424 | gap 2, opp_overlap 1532938 1532973, overlap 1532973 TCGAGCGCCGCAAGC ACGCGCGCC-GC-CGA CGGA TCGCGCAGGCGCGCGC TTTCAGCGCATACGA TERM 1665 1532973 - 1533004 + g 75 -14.5 -2.72511 | gap 2, opp_overlap 1532938 1532973, overlap 1532972 CGAGCGCCGCAAGCA CGCGCGCC-GC-CGA CGGA TCGCGCAGGCGCGCG CTTTCAGCGCATACG TERM 1666 1533004 - 1532973 - G 75 -14.5 -2.71364 | gap 2, opp_overlap 1532972 1532973, overlap 1532938 CGAGCGCCGCAAGCA CGCGCGCC-GC-CGA CGGA TCGCGCAGGCGCGCG CTTTCAGCGCATACG Bphy_1366 1533536 - 1533805 + | acyl-CoA-binding protein TERM 1667 1534630 - 1534594 - g 71 -9.9 -3.78934 | opp_overlap 1534596, overlap 1534558 1534595 GCCGCGCGACAACAA TGCCGGCGGCCGCGGCC GCC GTCCGCAGCCGGTCGCA CGTCCGGGCCTGCTG Bphy_1367 1534250 - 1535920 + | DEAD/DEAH box helicase domain-containing protein TERM 1668 1535970 - 1535953 - f 79 -12.7 -3.20494 | opp_overlap 1535953, overlap 1535951 ACTGAATCAGGAAGA CCGACGC TTCG GCGTCGG TTTTTTTTGCCTCGC TERM 1669 1535953 - 1535970 + F 100 -12.7 -5.81412 | opp_overlap 1535953 1535951 ACTGAATCAGGAAGA CCGACGC TTCG GCGTCGG TTTTTTTTGCCTCGC TERM 1670 1536055 - 1536029 - f 80 -5 -5.00616 | TTGCGTCGTAAAAAA TCGTGCTGCGTG GCA CAAGAAGCGCGA TTGCAAGATGGAAAA TERM 1671 1536237 - 1536191 - f 77 -11.7 -3.49951 | gap 2, opp_overlap 1536226, overlap 1536208 TAGACTCTTATATAA GACTTCG-CGAACCGAAA-CGCC TCA GGCGCCCTCGCTTCGTCGAAGCC ACGAGTCCATTCGAA Bphy_1368 1536281 - 1537585 + | isocitrate lyase TERM 1672 1537669 - 1537696 + T 100 -14.8 -4.65933 | opp_overlap 1537670, overlap 1537670 CCTTCGTTTCGGAAA ACGCGCGCCAGT GATC GCTGGCGCGCGG TTTGTTTTGGGGCTA TERM 1673 1537670 - 1537695 + T 100 -18.3 -3.38836 | opp_overlap 1537670, overlap 1537669 CTTCGTTTCGGAAAA CGCGCGCCAGT GATC GCTGGCGCGCG GTTTGTTTTGGGGCT TERM 1674 1537695 - 1537670 - T 100 -17.6 -4.07568 | opp_overlap 1537670 1537669 CTTCGTTTCGGAAAA CGCGCGCCAG TGATCG CTGGCGCGCG GTTTGTTTTGGGGCT Bphy_1369 1538143 - 1537709 - | UspA domain-containing protein Bphy_1370 1539283 - 1538381 - | LysR family transcriptional regulator TERM 1675 1539368 - 1539357 - H 72 -4.4 -4.58773 | opp_overlap 1539357 TTGATGAAAGTAAAA GATC AAGT GATC TTTACCGTCTTTTTT Bphy_1371 1539438 - 1540226 + | haloacid dehalogenase, type II TERM 1676 1540467 - 1540447 - g 84 -14 -3.58037 | opp_overlap 1540453 1540454 CAGCAACTGCTGAAA CTGCGCGC CGAAC GCGCGCAG CGTCTCGACGCCGGC Bphy_1372 1540300 - 1541892 + | malate synthase A TERM 1677 1541990 - 1542024 + T 100 -18.6 -5.00616 | CGGTTGACCGACCGG GATGGCCTGGCGGGCG TCA TGCCTGCTGGGCCATC TTTTTTGGGCGACCC Bphy_1373 1542457 - 1542050 - | AIG2 family protein Bphy_1374 1543004 - 1542510 - | regulator of ribonuclease activity A Bphy_1375 1543158 - 1544042 + | AraC family transcriptional regulator Bphy_1376 1544576 - 1544112 - | GCN5-related N-acetyltransferase TERM 1678 1544747 - 1544714 - R 100 -18.3 -4.19238 | opp_overlap 1544720, overlap 1544720 TCGGGAAGCGCAAAA CAAAAAGCCCGCTGA TATC TCAGCGGGCTTCTCG ATCTGGCGGAGCGGA TERM 1679 1544720 - 1544741 + r 89 -15.9 -3.39327 | opp_overlap 1544714 1544720 AGCGCAAAACAAAAA GCCCGCTGA TATC TCAGCGGGC TTCTCGATCTGGCGG TERM 1680 1544741 - 1544720 - R 100 -15.9 -5.46706 | opp_overlap 1544720, overlap 1544714 AGCGCAAAACAAAAA GCCCGCTGA TATC TCAGCGGGC TTCTCGATCTGGCGG TERM 1681 1545039 - 1545021 - R 100 -12.4 -4.86621 | opp_overlap 1545021 ATCTTTAATGAAAAA GCCCGCTC ACC GAACGGGC TTAATCTGGCGGAGT Bphy_1377 1547046 - 1545637 - | glutamyl-tRNA synthetase TERM 1682 1547160 - 1547112 - H 74 -7.4 -4.4078 | overlap 1547114 GCGCGGCAACGAAAA CG-GTTCGCTTCAGGCGACGGC AACAGCA GCCGGCGGC-GACGCGAACGCG ATAAAAAAGAGAGTG TERM 1683 1547587 - 1547630 + G 71 -13.7 -2.75343 | gap 1, opp_overlap 1547578 1547576, overlap 1547589 ATCAGACCGCAACGC CCGCTGCGCGTCGGCCTCGC ACTCG GCGGCGGCGCCGCGC-GCGG CTTTGCGCATATCGG TERM 1684 1547589 - 1547631 + G 84 -14.1 -3.59262 | gap 1, opp_overlap 1547578 1547576, overlap 1547587 CAGACCGCAACGCCC GCTGCGCGTCGGCCTCGC ACTCGGCG GCGGCGCCG-CGCGCGGC TTTGCGCATATCGGC TERM 1685 1547920 - 1547894 - g 86 -2.8 -5.15969 | overlap 1547896 GCCCAATCGAAAAAA TGGCGAAACCGC TCG GCGTCGTCGCAA CCGATCTGAAAACGG Bphy_1378 1547302 - 1548378 + | patatin TERM 1686 1548431 - 1548408 - T 100 -18.2 -4.2231 | opp_overlap 1548408 AAGCAGTACGTAAAA GGCCCGCTTC GAAC GAAGCGGGCC TTTTGCTTGAAACGG TERM 1687 1548408 - 1548431 + T 100 -18.2 -4.4078 | opp_overlap 1548408 AAGCAGTACGTAAAA GGCCCGCTTC GAAC GAAGCGGGCC TTTTGCTTGAAACGG Bphy_1379 1549135 - 1548464 - | NLP/P60 protein TERM 1688 1549157 - 1549179 + r 86 -8.4 -4.71061 | overlap 1549158 GGTGGTTGGTCTTGG TTATCGCGGG GAA TCCGCGGTAG TTTTTGCCTGTAAAT Bphy_1380 1550917 - 1549298 - | ABC transporter related TERM 1689 1550435 - 1550407 - G 77 -13.1 -3.35813 | overlap 1550391 GCGGACGGCAAGCAA GCGCCATCGCG ATCATCG CGCGCTGGCGC TGCCCGCCCGACAAC TERM 1690 1550547 - 1550565 + g 74 -11 -3.56821 | TCGGCTGCGCCCACG CCGTCGTG CAG CACGATGG TTTCGGCAATCTGCT Bphy_1381 1552017 - 1550914 - | binding-protein-dependent transport systems inner membrane component TERM 1691 1551986 - 1551964 - G 78 -14.1 -3.26471 | CGACGGCGACACGAA CGCGCGCAC CGGCT GCGCGCGCG ACACTTCGGCATCTG Bphy_1382 1553059 - 1552019 - | binding-protein-dependent transport systems inner membrane component Bphy_1383 1555059 - 1553137 - | extracellular solute-binding protein TERM 1692 1554406 - 1554388 - G 79 -10.2 -4.08216 | CCACTTGCGCGAAAA CACGGGCA TGC CGCCCGCG AGCAACGGCAACTCG TERM 1693 1555443 - 1555487 + G 72 -13 -3.14344 | overlap 1555432 AGTCTTGACGGTCTC GTC-CATTCGATCGGCTTCGCG CCG CGCGAAGC-GATCGCAGGCGAC TTCCTCGACGGCATG Bphy_1384 1555179 - 1555970 + | short-chain dehydrogenase/reductase SDR TERM 1694 1556036 - 1556024 - T 100 -10.5 -5.06414 | opp_overlap 1556018 1556024 TGCGCGCAACAAAAA CCGCC CCG GGCGG TTTTTTGCTTTGCGC TERM 1695 1556024 - 1556036 + T 100 -10.5 -5.37593 | opp_overlap 1556024, overlap 1556018 TGCGCGCAACAAAAA CCGCC CCG GGCGG TTTTTTGCTTTGCGC Bphy_1385 1556401 - 1556063 - | hypothetical protein TERM 1696 1556474 - 1556461 - R 70 -4.5 -4.46073 | opp_overlap 1556461 TTCGAATATAACAAA GCGTC GCTT AACGC GTATTTCAACTTTGT TERM 1697 1556770 - 1556750 - R 70 -4 -4.57569 | gap 1, overlap 1556752 TGACGGGGGTAAAAA GACACGCGA AGAC TCGCATG-C AAATTCAGATGCGCA TERM 1698 1556826 - 1556801 - R 100 -16.9 -5.26119 | opp_overlap 1556823 CGCGCAAAAACAAAA CCCCGCAGAGC CGCA GCTCTACGGGG TTCCACCGCCATTTC TERM 1699 1557133 - 1557101 - R 77 -7.8 -4.26792 | gap 1, opp_overlap 1557105 1557107, overlap 1557105 ACACAAACTTGAAAA CAAATGCCTG-TCGC CGCA GCGAACAGGTATTCG TGGCCATCAAGCCTG TERM 1700 1557129 - 1557105 - R 72 -5 -4.69559 | gap 1, opp_overlap 1557105 1557107, overlap 1557101 AAACTTGAAAACAAA TGCCTG-TCGC CGCA GCGAACAGGTA TTCGTGGCCATCAAG Bphy_1386 1558390 - 1557140 - | aspartate kinase TERM 1701 1558312 - 1558328 + g 71 -9.3 -3.7282 | CCTTGTGCCATTTCG CGACGCG CTT CGCGACG TTCTTGATGCGCTCG TERM 1702 1558521 - 1558541 + r 73 -12.5 -2.75294 | overlap 1558520 1558537 GGCGGCGCAGATGCA GCGCGCGTG CAG CACGCGCGG ATTTGCCGGGTTTGC Bphy_1387 1560281 - 1558863 - | tRNA(Ile)-lysidine synthetase TERM 1703 1559481 - 1559516 + g 74 -11 -3.61398 | gap 1, opp_overlap 1559461, overlap 1559463 CGCGCGCTCGTCGTC GAGGGCGAGC-AGCGCG TCG CGCGAGAGCGCGCCCTC TTCTTCGCCACGCGC TERM 1704 1560263 - 1560223 - G 85 -11.8 -4.11484 | gap 1, opp_overlap 1560225, overlap 1560227 GGCAAGGCGCCAAAA GCAAC-GCCGACCGCATCG AGAA CGAGGCGGTCGGCGGATGT GTCAGCGGAGAGAGT TERM 1705 1560225 - 1560260 + g 77 -14.6 -2.87132 | opp_overlap 1560223 1560227 CAAGGCGCCAAAAGC AACGCCGACCGCATCG AGAA CGAGGCGGTCGGCGGA TGTGTCAGCGGAGAG TERM 1706 1560258 - 1560227 - G 100 -21.6 -3.67175 | opp_overlap 1560225, overlap 1560223 AGGCGCCAAAAGCAA CGCCGACCGCATCG AGAA CGAGGCGGTCGGCG GATGTGTCAGCGGAG Bphy_1388 1561298 - 1560327 - | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit Bphy_1389 1562479 - 1561457 - | HhH-GPD family protein TERM 1707 1562208 - 1562224 + g 71 -10.1 -3.60098 | overlap 1562203 CCCGCCAGTTCGGCA GGCAGCG AGC CGTTGCC TTTCAAGTGCGCAGT Bphy_1390 1563924 - 1562527 - | cysteinyl-tRNA synthetase TERM 1708 1564099 - 1564127 + G 77 -4.6 -4.65916 | gap 1, opp_overlap 1564100, overlap 1564100 CGAGTGGCGAAAGAC AGTCTGTG-GTTC GACG GAACGCGCAGACC TTTTGTTAGAATGGG Bphy_1391 1564087 - 1564983 + | TPR repeat-containing protein Bphy_1392 1565066 - 1565647 + | peptidyl-prolyl cis-trans isomerase cyclophilin type Bphy_1393 1565794 - 1566288 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 1709 1566394 - 1566368 - g 79 -10.1 -4.1673 | gap 1, opp_overlap 1566389 CAATGCTGCAAGAAA CG-CCGCTGCGA AGCG TCGCTGCGGGCG TGCCTGGCGAGGGCA TERM 1710 1566389 - 1566432 + G 100 -21.6 -5.38054 | opp_overlap 1566368 1566412 TGCGAAGCGTCGCTG CGGGCGTGCCTGGCGAGGGC AAAC GCCCTCACGCGGCGCGCCCG TTTTTCTTTATCGCC Bphy_1394 1566355 - 1567155 + | UDP-2,3-diacylglucosamine hydrolase Bphy_1395 1568048 - 1567233 - | serine O-acetyltransferase Bphy_1396 1569126 - 1568296 - | RNA methyltransferase Bphy_1397 1569484 - 1570287 + | inositol-phosphate phosphatase TERM 1711 1570308 - 1570321 + F 100 -9.5 -5.72622 | opp_overlap 1570308 TGTTCGGTCTCGAAA GCGGC TCCG GCCGC TTTTTTCTTTATGAG TERM 1712 1571237 - 1571255 + G 70 -13.8 -2.53876 | opp_overlap 1571207, overlap 1571235 GGGCATTGCGATCGG CGCGGCGG CGG CCGCTGCG TGGATTCCGCTGCGC Bphy_1398 1570419 - 1571717 + | major facilitator transporter TERM 1713 1572027 - 1571989 - g 75 -4.4 -4.60487 | gap 1, overlap 1571990 GACGACGCGGAAAAA GCCGCGC-GCCTGCTCG ATCTGA CGCTCACACAGCGCGGC GCATCGGGCGGCAAT TERM 1714 1573820 - 1573836 + G 72 -11.5 -3.54424 | TCGGCAGTTATGTAC CGGCGCG CCG CGCGTCG TTTGGCCCGATCGAC Bphy_1399 1571839 - 1574517 + | DNA mismatch repair protein MutS TERM 1715 1575206 - 1575188 - g 75 -8 -4.21194 | opp_overlap 1575194, overlap 1575189 GCCGAGTATGCAAAA CGCCGCGG CGC CCGCGCCA TCGTCGTGCTGGTGC Bphy_1400 1574504 - 1575733 + | hypothetical protein TERM 1716 1575783 - 1575766 - T 87 -14.1 -3.35438 | CAGTAGATGCGACAA CGGGCGC TCGC GCGCCCG CTTCGGGAACTGCTC Bphy_1401 1576383 - 1575832 - | FKBP-type peptidyl-prolyl cis-trans isomerase 2-like protein TERM 1717 1577519 - 1577506 - g 83 -9.5 -4.35604 | TGAATGGAGAAGAAA GCCGG TTGT CCGGC GTTAAAAAATGGGTG Bphy_1402 1576551 - 1577663 + | cupin 4 family protein TERM 1718 1577714 - 1577698 - T 75 -5.2 -4.70659 | CCGTATAGCGAAAAA TTGTCT GAGAA AGACAA CGTATTGGCCCCGGA TERM 1719 1578274 - 1578239 - T 100 -22.1 -4.07568 | opp_overlap 1578239 1578245, overlap 1578245 GCTTCCCGGGCAAAA GCAAAACGCCACGGA TTTCAG TCCGTGGCGTTTTGC TTTATGTGCCTGCGT TERM 1720 1578239 - 1578274 + T 100 -22.8 -4.06678 | opp_overlap 1578239 1578245, overlap 1578245 GCTTCCCGGGCAAAA GCAAAACGCCACGGAT TTCA GTCCGTGGCGTTTTGC TTTATGTGCCTGCGT TERM 1721 1578245 - 1578268 + T 100 -14.6 -4.65153 | opp_overlap 1578245 1578239, overlap 1578239 CGGGCAAAAGCAAAA CGCCACGGAT TTCA GTCCGTGGCG TTTTGCTTTATGTGC TERM 1722 1578268 - 1578245 - T 100 -13.9 -4.67038 | opp_overlap 1578239 1578245, overlap 1578239 CGGGCAAAAGCAAAA CGCCACGGA TTTCAG TCCGTGGCG TTTTGCTTTATGTGC Bphy_1403 1580750 - 1578477 - | helicase c2 TERM 1723 1578531 - 1578504 - G 74 -5.4 -4.56597 | overlap 1578506 CCGCTCTTCGAAAAA CTCGCGCACGAC GTCC ATCTCGCGCGTG CGCTTGAACGGCGGC TERM 1724 1579231 - 1579251 + g 78 -15.4 -2.71144 | opp_overlap 1579226 GACGTGAAGACCCAT GCGCGCGG CACGC CCGCGCGC TGCTTCGCGAAAATA TERM 1725 1580235 - 1580225 - G 79 -2.4 -5.07486 | TATCGCGAAGAAAAA GCTG ATC CTGC AGGTGCTTCGTGCCC Bphy_1404 1581038 - 1580820 - | hypothetical protein Bphy_1405 1582011 - 1581169 - | lipoprotein TERM 1726 1581730 - 1581744 + g 95 -10 -4.77036 | TTCGTCGCGTTGACG CGCATG CTC CATGCG TTTTTCGTCGTCGAG TERM 1727 1583050 - 1583018 - g 77 -12 -3.58522 | gap 1, opp_overlap 1583042 ACGACTATTCCGAAA CGATCCGCACGGTGC CGTC GCACCGCGC-GCTCG CGCTCTTCCGCGGCC TERM 1728 1583783 - 1583759 - g 70 -2.1 -4.62471 | gap 1, overlap 1583760 1583763 CGGAACTCGTAAAAA TCGA-GCCGA AGGCGA TCGGCGTCGG CCAGTATCAGCATGA TERM 1729 1584631 - 1584667 + G 82 -15.8 -3.16881 | gap 1 GGCGGCGCAGGTGCC CGGGCGCAGCAGTCCCG GTCT CGGGAC-GCCGAGCCCG TTAATGCGATGGCTG Bphy_1406 1582366 - 1584708 + | RNA-binding S1 domain-containing protein Bphy_1407 1586763 - 1584877 - | K potassium transporter TERM 1730 1587030 - 1587011 - R 100 -10.7 -5.08178 | opp_overlap 1587011 AGACATAGACAAAAA CGGAGCC TCGCAG GGCTCCG TTCCATACGGCCGCA Bphy_1408 1587667 - 1587083 - | phosphoribosyltransferase TERM 1731 1587501 - 1587475 - G 74 -11.5 -3.63627 | GCGGCAGATCGTAAA TGCGCGACAGC TGATC GCCGACGCGCA GCCCACCGCGCGCGA Bphy_1409 1589017 - 1587671 - | adenylosuccinate synthase TERM 1732 1587732 - 1587700 - G 73 -9.2 -3.8211 | gap 1, opp_overlap 1587707, overlap 1587730 GGTGACGCAGAAGAA TGGTCTCGTCGCGGT CCGG ACC-CGTCGAAACCA TGTCGATGGGCACGC Bphy_1410 1590378 - 1589227 - | tRNA synthetase class II (G H P and S) TERM 1733 1589698 - 1589647 - G 75 -10.6 -3.85698 | opp_overlap 1589616 1589660 CTGCTGCGCGAGAAA CGCGAGATCGTCGAGCGCGCGTGA GATT TCCGGCGCGTTCGGCAAGCGCGCG CGCGCCTCTTCGAGC TERM 1734 1590617 - 1590598 - R 84 -7.1 -4.77036 | overlap 1590602 1590603 CGCGATCATCAAAAA CGAAGCG GGACGT CGCCTCG TGAGCGACGCCCGAT Bphy_1411 1590837 - 1590646 - | hypothetical protein Bphy_1412 1591795 - 1590881 - | band 7 protein Bphy_1413 1593203 - 1591806 - | HflK protein TERM 1735 1592686 - 1592659 - G 75 -6.8 -4.35116 | opp_overlap 1592676 1592677, overlap 1592661 1592674 TACTGGACAGCAAAA CGGACGTCGACG ATAT CGGCGTCGTGCG TGAGCATCGACGCGT Bphy_1414 1594478 - 1593234 - | GTP-binding proten HflX TERM 1736 1593900 - 1593945 + g 71 -8.1 -4.07568 | gap 1 CACCGACATCGTACG GTTGCG-CGCCCGCGCGCGACG CTG CGTGCCGTGCTGGCGACCCAGC TTTTCGAGCCGCCCC TERM 1737 1594031 - 1594043 + g 77 -4.7 -4.59773 | CGCCGGGACCGCGCA GGCCG ATA CCGCC TTTTTGACGCTCGAG TERM 1738 1594527 - 1594485 - R 81 -11.9 -3.68366 | gap 1, overlap 1594481 GGATGTCAAAATGAA GCGGCCGGGC-AGTGTCGCC TGCG GACGAGGCTCGACCGGCCGC GACGAAGGGTTAGGA Bphy_1415 1594773 - 1594537 - | RNA chaperone Hfq Bphy_1416 1596304 - 1594964 - | small GTP-binding protein TERM 1739 1596366 - 1596386 + r 83 -13.3 -3.54638 | GCGCTGGCAACGCCA TGCGGCCGT TGC ACGGCTGCA TTTGACGAAAATTAT TERM 1740 1596660 - 1596629 - R 85 -10.8 -4.26903 | gap 1, overlap 1596632 1596646 GGGACGCCAGTAAAA CAGCTGC-GGCCGGC AAA GCCGGCCTGCAATCG CCGCACGGCGCCCCC TERM 1741 1596657 - 1596632 - R 76 -13.3 -2.83772 | gap 1, overlap 1596629 1596646 ACGCCAGTAAAACAG CTGC-GGCCGGC AAA GCCGGCCTGCAA TCGCCGCACGGCGCC Bphy_1417 1597865 - 1596705 - | outer membrane assembly lipoprotein YfgL TERM 1742 1597925 - 1597891 - R 83 -13.6 -3.39521 | gap 1, overlap 1597886 TTGATCAAAAGGTAA CGGC-GGGCGTTGCG GCAACG CGCAACGCTCAGCCG CCCAGCGCGTCGAGC Bphy_1418 1598545 - 1597919 - | hypothetical protein TERM 1743 1598067 - 1598049 - G 71 -7.4 -4.15044 | TGCGCGGCTAACAAA TCGCCG CGCCGGT CGGCGA CCACGCCCTTGAACG TERM 1744 1598528 - 1598554 + g 72 -2.9 -4.59376 | opp_overlap 1598545, overlap 1598529 1598530 TTCAATCGATTCTTG TTCGTCGTGGT AACTC ATCGCGACGCG TTTTCCTTTCGTGGT Bphy_1419 1599972 - 1598632 - | histidyl-tRNA synthetase TERM 1745 1599301 - 1599319 + g 74 -2.2 -4.8048 | overlap 1599302 1599303 GGGCGCGTTCTGCGC GACGGCCT GAA GGGCCGGA TTTTTCGTGTCCAGC TERM 1746 1599912 - 1599886 - G 79 -7.2 -4.56597 | opp_overlap 1599900 1599902 CGTCGTTTCGAAAAA CTCCCACAAGCC TGC GTCCTGCGGAAG GATGTCGTTCATGCC Bphy_1420 1601319 - 1600006 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 1747 1601426 - 1601401 - R 100 -16.1 -4.7629 | opp_overlap 1601418 1601419 GCATGAATTGAAAAA GCGCCGCAGCC CCGA AGCCGCGGCGC ACGCGATTGATTTGC Bphy_1421 1602552 - 1601443 - | XRE family transcriptional regulator TERM 1748 1602142 - 1602122 - G 71 -12.5 -3.25088 | overlap 1602114 1602123 1602125 CCCCAAAGCCACGAA CGACGGCGC GGC GCACCGCCG CCGCCAAGCGACAGC Bphy_1422 1603910 - 1602762 - | radical SAM protein TERM 1749 1603095 - 1603109 + g 74 -11.4 -3.60296 | opp_overlap 1603095 TTCGAAGGTGATGAA GTCGCG CGG CGCGAC TTTCAGATAACGCTG TERM 1750 1603576 - 1603603 + g 76 -9.8 -4.16284 | gap 1, opp_overlap 1603586, overlap 1603577 ACGGCGCATCCAGCC TGCGACGACACGC ACA GCGTGCCG-CGCG TTTCTTCAGGGATGT Bphy_1423 1604444 - 1604019 - | nucleoside-diphosphate kinase Bphy_1424 1604769 - 1605467 + | hypothetical protein TERM 1751 1605520 - 1605558 + T 100 -27.7 -4.72272 | opp_overlap 1605520 GTGGCCGGCCAAAAA CAGAAACGCCCGTGACG CGCCA CGTCACGGGCGTTTCTG TTTTTGCTCCAGCGA TERM 1752 1605558 - 1605520 - T 100 -28.4 -4.56597 | opp_overlap 1605520 GTGGCCGGCCAAAAA CAGAAACGCCCGTGACGC GCC ACGTCACGGGCGTTTCTG TTTTTGCTCCAGCGA Bphy_1425 1606356 - 1605583 - | beta-lactamase domain-containing protein Bphy_1426 1607513 - 1606365 - | putative lipoprotein TERM 1753 1607359 - 1607382 + g 72 -11.6 -3.52539 | overlap 1607360 TCGCTCGGCACGGTC AGCGGCGGCG CGCT CGCCGTCGCC TTGTAATTCACCTTG TERM 1754 1607360 - 1607381 + g 75 -15.1 -2.71041 | overlap 1607359 CGCTCGGCACGGTCA GCGGCGGCG CGCT CGCCGTCGC CTTGTAATTCACCTT TERM 1755 1607630 - 1607591 - R 78 -3.5 -5.0538 | gap 2, overlap 1607612 1607615 CGTCAGTTGAAAAAA TGC-CGGAAG-GCGCCTGA AAAA CCAGACGCTCAGCCGAGCA GCCCTGCCTCGCGCA TERM 1756 1607668 - 1607612 - R 70 -4.3 -4.57341 | overlap 1607591 1607615 AAGGCGCCTGAAAAA CCA-GACGCTCAGCCGAGCAGCCCTGC CTCGC GCAGCGCAGCGCGGACCA-CGTCGTGG TAACGCGCGTCAAGC Bphy_1427 1608528 - 1607620 - | dihydrodipicolinate synthase Bphy_1428 1609188 - 1608571 - | hypothetical protein TERM 1757 1609114 - 1609082 - G 84 -17 -2.79183 | overlap 1609042 1609043 1609103 GCCACGTCGAGCACA GCGCCGCGCGCATC GACCA GATGCGCCCAGCGC TTCACCCAGCGCGAC Bphy_1429 1610390 - 1609188 - | tryptophanyl-tRNA synthetase TERM 1758 1609516 - 1609532 + g 72 -6.5 -4.29829 | ACGCGCGCCGGGTCG GTCGGCA TCG TGCGGAC TTTCTTCGTGATTGT Bphy_1430 1611062 - 1610400 - | peptidase M50 Bphy_1431 1611813 - 1611121 - | Sua5/YciO/YrdC/YwlC family protein Bphy_1432 1612663 - 1611830 - | phosphotransferase domain-containing protein TERM 1759 1611967 - 1611921 - G 100 -15.1 -4.25104 | gap 1, opp_overlap 1611920, overlap 1611922 CCGGCCGCATGAAAA TCGGAC-CCGCGCGATGCCTCG AAAC CGAAGCGCCGCGCGACGTCCGC GTATTCGCGGTACTG TERM 1760 1611966 - 1611922 - G 89 -18.6 -3.14848 | gap 1, opp_overlap 1611920, overlap 1611921 CGGCCGCATGAAAAT CGGAC-CCGCGCGATGCCTCG AAAC CGAAGCGCCGCGCGACGTCCG CGTATTCGCGGTACT Bphy_1433 1613656 - 1612748 - | alpha/beta hydrolase fold protein TERM 1761 1613047 - 1613105 + g 71 -12.5 -3.23216 | gap 3, opp_overlap 1613079 1613081 CATACCCGCCCGTCC CGTCCGGCTT-CGAC-CAGTGCTGCGCG AGAAAA CGGGC-GCGCTGCGGCGCAAGCCGGGCG TTGGTCCTGATGAGA Bphy_1434 1614578 - 1613724 - | hypothetical protein TERM 1762 1614632 - 1614603 - H 86 -4.9 -5.32565 | gap 1, opp_overlap 1614627, overlap 1614605 CAAGCAACGAAAAAA CACACGACGTGCAA TTC TGGCACGGCGCG-G CGCACGCGCGCGCTT TERM 1763 1614631 - 1614605 - H 81 -8.6 -4.27681 | opp_overlap 1614627, overlap 1614603 AGCAACGAAAAAACA CACGACGTGCAA TTC TGGCACGGCGCG GCGCACGCGCGCGCT Bphy_1435 1614779 - 1615303 + | hexapaptide repeat-containing transferase Bphy_1436 1615368 - 1616318 + | Hsp33 protein TERM 1764 1616618 - 1616581 - g 72 -12.7 -3.14132 | gap 1 TTGCCCGCCGATCAA TCCGGCATC-GCGGCGAC GGC GCAACCGCTGACGCCGGA AGAACGCGCCCGCTA Bphy_1437 1616440 - 1616826 + | putative lipoprotein TERM 1765 1616872 - 1616895 + T 100 -18.2 -3.71848 | opp_overlap 1616872 CTCGCCAAAACAAAA GGCGCGGTTC GCAT GAACCGCGCC TTGTTCGTAAGGCCG TERM 1766 1616895 - 1616872 - T 100 -18.2 -5.07652 | opp_overlap 1616872 CTCGCCAAAACAAAA GGCGCGGTTC GCAT GAACCGCGCC TTGTTCGTAAGGCCG Bphy_1438 1617387 - 1616938 - | septum formation initiator Bphy_1439 1618813 - 1617530 - | phosphopyruvate hydratase TERM 1767 1618115 - 1618130 + g 72 -6.8 -4.21275 | gap 1 CAGGACGTCTTCACC GGCGCGG TAG CCG-GCC TTTTCGATCGCTTGC TERM 1768 1618942 - 1618914 - R 86 -16 -2.78384 | opp_overlap 1618912 1618909 TCGGGTTGGAGCACA CGTGCAGCGCCG GACCG CGACGCCGCACG CGTGATTGCATCAGT Bphy_1440 1619807 - 1618953 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1769 1619784 - 1619769 - G 80 -4.6 -4.77036 | opp_overlap 1619769 1619768 1619779 CGCGATCAGGAAAAA CGGCTT GTCG AGGCCG ATTTCGAAATCGCCC Bphy_1441 1621465 - 1619804 - | CTP synthase TERM 1770 1621500 - 1621488 - R 75 -5.5 -4.56597 | TGCTCGCGGGAAAAA CGGAT TAT ACCCG AACGCGTGCTTCCAG TERM 1771 1621562 - 1621580 + r 78 -9.5 -3.9712 | opp_overlap 1621551 CGAACGTGCTTTTCA GCGCGCC CGCGC GGCGTGC TTTCTGCTGCAATGC Bphy_1442 1622408 - 1621614 - | alpha/beta hydrolase fold protein Bphy_1443 1624991 - 1622460 - | DNA internalization-related competence protein ComEC/Rec2 TERM 1772 1623678 - 1623666 - G 93 -3.3 -5.41143 | overlap 1623667 TATCTGCGAAAAAAA GCAGA CCG TCAGC GGTGCGAGCGCGATC Bphy_1444 1625878 - 1625090 - | TatD-related deoxyribonuclease Bphy_1445 1626657 - 1625914 - | lipoprotein releasing system, ATP-binding protein Bphy_1446 1627903 - 1626650 - | LolC/E family lipoprotein releasing system, transmembrane protein TERM 1773 1628687 - 1628723 + G 72 -13 -3.05384 | gap 1 ACGCTGGTATCTGTC CAGCGACGCGTTCGGCA CGCT TGC-GGGCGCGTCGCCG TTACGTGCGAGCGGC TERM 1774 1629269 - 1629291 + G 73 -5.5 -4.43477 | overlap 1629267 1629268 1629266 TCTGCGCAAATTCTG GCGGCGC CGTCTGTTT GCGTCGC TTTTCATTGAATGAA Bphy_1447 1628211 - 1629305 + | hypothetical protein TERM 1775 1629596 - 1629542 - g 77 -11.4 -3.76952 | gap 3, opp_overlap 1629559 GCGATCGAAGGCAAA CGCCGCATGCTGGTCGTCGCCGACTAC GACT GC-GACGGCG-CGACC-GCCTGCGCCG TCGCCGTACGCGGAC TERM 1776 1629729 - 1629687 - g 91 -16.3 -3.55444 | gap 1, opp_overlap 1629689, overlap 1629688 GTCTGACGCCTGAAA TCGTCGGGCTTGCCGCGCAG CGTC CCG-GCGGCAAGCCCGACTT GCTGATCACCGTCGA TERM 1777 1629728 - 1629688 - g 93 -19.8 -2.73124 | gap 1, opp_overlap 1629689, overlap 1629687 TCTGACGCCTGAAAT CGTCGGGCTTGCCGCGCAG CGTC CCG-GCGGCAAGCCCGACT TGCTGATCACCGTCG TERM 1778 1629689 - 1629727 + G 100 -21.1 -3.21416 | gap 1, opp_overlap 1629688 1629687 CTGACGCCTGAAATC GTCGGGCTTGCCGCGCAG CGTC CCG-GCGGCAAGCCCGAC TTGCTGATCACCGTC TERM 1779 1630147 - 1630171 + G 72 -13.5 -3.13475 | opp_overlap 1630115 TTTTCGCGCAGCGGG GCGCGATGCGC GCA GCGCGTCGGGC TTCGATCTGGGCTTC Bphy_1448 1629302 - 1631035 + | single-stranded-DNA-specific exonuclease RecJ TERM 1780 1631159 - 1631192 + F 100 -13.7 -4.41348 | GTTTTGCTGTTGGTC GGCTGGCGTTGCCCC GTGC GGGGCGGCACCTGCC TTTCTTTGCCGCCGC TERM 1781 1632024 - 1632005 - g 81 -9.3 -4.25104 | overlap 1632016 GGCGCGCGAGGAAAA CGACGAG GACACG CTCGTCG CGTGCGAGGAAGACG Bphy_1449 1631751 - 1632830 + | peptide chain release factor 2 TERM 1782 1632841 - 1632869 + F 100 -8.7 -5.0133 | opp_overlap 1632831, overlap 1632842 1632843 TCTAAGGGCAGCGCA CCCGGCGCGGC ACATTCC GCCGCGCCGCA TTTTTTCACCGCCTG TERM 1783 1632842 - 1632868 + F 77 -12.2 -3.60316 | opp_overlap 1632831, overlap 1632841 1632843 CTAAGGGCAGCGCAC CCGGCGCGGC ACATTCC GCCGCGCCGC ATTTTTTCACCGCCT TERM 1784 1632843 - 1632867 + F 86 -15.7 -2.75708 | opp_overlap 1632831, overlap 1632842 1632841 TAAGGGCAGCGCACC CGGCGCGGC ACATTCC GCCGCGCCG CATTTTTTCACCGCC TERM 1785 1633046 - 1633024 - g 71 -7.6 -4.08216 | overlap 1633005 1633025 TGAGCGCCGCGAAAA GTTGCGCGCG CTG CGCGAGCAAG GCGTCGCCTATCCGA TERM 1786 1633888 - 1633835 - g 77 -11.8 -3.68073 | opp_overlap 1633863 GATTTCACGGAACAA CTGATCCGTCA-GGCCGCCGTCGACG CGCT CGGCAAC-GCGGCCATCACGTATCAG GGCCGCGAACTCGAT Bphy_1450 1632938 - 1634476 + | lysyl-tRNA synthetase TERM 1787 1634528 - 1634543 + F 76 -11.8 -3.36671 | ACGGAGGGTTTGCTG GCGCCG TGCA CGGCGC TTCTCCCCTTGCCCT TERM 1788 1634645 - 1634675 + F 90 -7.5 -5.08824 | gap 2, overlap 1634645 1634644 ACTCGCCGAAGCCCG GTGC-C-GGCGCGGC TTA GCCGCTCCCGTGCGC TTTTTTGCGTGAACA Bphy_1451 1634833 - 1635561 + | 17 kDa surface antigen TERM 1789 1635613 - 1635584 - T 100 -19.5 -3.63515 | opp_overlap 1635584 1635588, overlap 1635588 TTTGAGCCGCAAGAA GAAAGGCGACTTC CTCG GAAGTCGCCTTTC TTTTTCAAGCTGCTG TERM 1790 1635584 - 1635613 + T 100 -19.5 -4.60487 | opp_overlap 1635584 1635588, overlap 1635588 TTTGAGCCGCAAGAA GAAAGGCGACTTC CTCG GAAGTCGCCTTTC TTTTTCAAGCTGCTG TERM 1791 1635588 - 1635609 + T 100 -14.5 -4.86385 | opp_overlap 1635584 1635588, overlap 1635584 AGCCGCAAGAAGAAA GGCGACTTC CTCG GAAGTCGCC TTTCTTTTTCAAGCT TERM 1792 1635609 - 1635588 - T 100 -14.5 -4.45068 | opp_overlap 1635588 1635584, overlap 1635584 AGCCGCAAGAAGAAA GGCGACTTC CTCG GAAGTCGCC TTTCTTTTTCAAGCT Bphy_1452 1635833 - 1635636 - | FeS assembly protein IscX Bphy_1453 1636190 - 1635849 - | ferredoxin, 2Fe-2S type, ISC system TERM 1793 1636253 - 1636263 + r 72 -4.6 -4.56597 | GTACCATTTTACTGG TGGC GCG GCCG TTTTTGGCACGCGCC Bphy_1454 1638157 - 1636286 - | Fe-S protein assembly chaperone HscA TERM 1794 1636369 - 1636389 + g 72 -9 -4.05033 | gap 1 ATTCGTCGGTGCCTT CGGCGAGCG TCTT CG-TCGCCG TTTCTATCGCGTCGA TERM 1795 1637180 - 1637192 + g 80 -4.7 -4.72272 | GGCCGTCAGTTTGGC GTCGC GCA GCGCC TTTTTCGTCGGGCCG Bphy_1455 1638776 - 1638249 - | co-chaperone Hsc20 TERM 1796 1638610 - 1638630 + g 71 -7.5 -4.11394 | overlap 1638604 TCGTTCGTGCGGGTC GCCCATTGC ATC GCGATGCGC TTTTGCGCGTCGCCT TERM 1797 1638872 - 1638857 - R 100 -11.8 -5.22039 | opp_overlap 1638857 GCGAAATTGAAAAAA GGCGGC ACAG GCCGCC TTTTCAGCATGACTC TERM 1798 1638857 - 1638872 + r 90 -11.8 -4.11692 | opp_overlap 1638857 GCGAAATTGAAAAAA GGCGGC ACAG GCCGCC TTTTCAGCATGACTC Bphy_1456 1639250 - 1638894 - | iron-sulfur cluster assembly protein IscA Bphy_1457 1639772 - 1639365 - | FeS cluster assembly scaffold IscU Bphy_1458 1641055 - 1639832 - | cysteine desulfurase IscS Bphy_1459 1641649 - 1641125 - | BadM/Rrf2 family transcriptional regulator Bphy_1460 1642288 - 1641761 - | protein tyrosine phosphatase TERM 1799 1641964 - 1642007 + g 73 -9.4 -3.8512 | opp_overlap 1641957 1641988, overlap 1641965 1641995 TCAGCAGACGGATCT TGTCGCGCTGTGCCGGCGGA CAGA TCTGCCTGAGCGCCGCGACG TTCTTGTCGTCCATC Bphy_1461 1642638 - 1642402 - | hypothetical protein TERM 1800 1642819 - 1642801 - H 76 -11.8 -3.40403 | opp_overlap 1642799 CGCCCTCCAGGATAA TCTTTCGG CTC CCGAAAGA AATCCTTACAAAAGC Bphy_1462 1642910 - 1643398 + | hypothetical protein TERM 1801 1643479 - 1643450 - T 100 -18 -4.19624 | opp_overlap 1643450 GATCCGGAAGACAAA GAGGCTGCATCG GGCGAG CGATGCAGCCTC TTTCAATAGCAGCGA TERM 1802 1643450 - 1643479 + T 100 -18 -3.64703 | opp_overlap 1643450 GATCCGGAAGACAAA GAGGCTGCATCG GGCGAG CGATGCAGCCTC TTTCAATAGCAGCGA Bphy_1463 1644929 - 1643517 - | hypothetical protein Bphy_1464 1645708 - 1644986 - | hypothetical protein TERM 1803 1645819 - 1645833 + H 81 -4.2 -5.03314 | overlap 1645820 TCAGATTCGATCGCT TCGAAC GGC GTTCGC TTTTTTCACAATACG Bphy_1465 1645896 - 1646702 + | IclR family transcriptional regulator TERM 1804 1646759 - 1646728 - T 80 -9.4 -4.2123 | opp_overlap 1646730 1646733, overlap 1646733 1646736 TAGCCACGCAATAAA TGCAAGAAGCCCCG CATG CGGGGCTTCTTAGT TTTCGTCGGGTACGC TERM 1805 1646730 - 1646758 + T 95 -14 -4.26903 | gap 1, opp_overlap 1646728 1646733 1646736, overlap 1646733 GCCACGCAATAAATG C-AAGAAGCCCCG CATG CGGGGCTTCTTAG TTTTCGTCGGGTACG TERM 1806 1646754 - 1646733 - T 89 -15.9 -3.38162 | opp_overlap 1646730 1646733, overlap 1646728 1646736 ACGCAATAAATGCAA GAAGCCCCG CATG CGGGGCTTC TTAGTTTTCGTCGGG TERM 1807 1646733 - 1646754 + T 100 -15.9 -3.71672 | opp_overlap 1646733 1646728 1646736, overlap 1646730 ACGCAATAAATGCAA GAAGCCCCG CATG CGGGGCTTC TTAGTTTTCGTCGGG TERM 1808 1646751 - 1646736 - T 83 -11.8 -3.81626 | opp_overlap 1646733 1646730, overlap 1646733 1646728 CAATAAATGCAAGAA GCCCCG CATG CGGGGC TTCTTAGTTTTCGTC Bphy_1466 1647948 - 1646785 - | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 TERM 1809 1647287 - 1647265 - G 70 -11.2 -3.34398 | overlap 1647263 GCCGCCCGGGAAATA GCGCGACAGC GCA GCCGCCGCAC GGTTTTCCGACGCCA TERM 1810 1648441 - 1648454 + H 74 -2.3 -5.00616 | CGCGAGCCCGTCCGG CTTGG GAGA CCACG TTTTTTGCCGCACCA Bphy_1467 1648719 - 1649303 + | phasin family protein TERM 1811 1649496 - 1649513 + T 100 -8.3 -5.40072 | overlap 1649497 AACAGCGTATCGTTT CCCCGGC TCAG GCCGGGA TTTTTTTGCCCGCCC TERM 1812 1649497 - 1649512 + T 83 -11.8 -3.83561 | overlap 1649496 ACAGCGTATCGTTTC CCCGGC TCAG GCCGGG ATTTTTTTGCCCGCC TERM 1813 1649587 - 1649616 + T 100 -19.3 -3.57462 | opp_overlap 1649587 GACGCCCATGAAAAA CGGCGCGCCCTTC TTCC GAAGGACGCGCCG TTTGCACATGCACTG TERM 1814 1649616 - 1649587 - T 100 -21.5 -4.72986 | opp_overlap 1649587 GACGCCCATGAAAAA CGGCGCGCCCTTC TTCC GAAGGACGCGCCG TTTGCACATGCACTG Bphy_1468 1651723 - 1649666 - | dihydrolipoamide dehydrogenase TERM 1815 1651968 - 1651936 - R 74 -12.8 -2.90723 | gap 1, overlap 1651924 GCAGGTTCAACGAGA GCGCCCGAATGACCG TATC CGATCAT-CGAGCGC TAGCGACACAACCTC Bphy_1469 1653635 - 1651989 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase Bphy_1470 1656417 - 1653718 - | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type TERM 1816 1656630 - 1656645 + H 78 -4 -5.01732 | gap 1 AGTTTGCGCCGAATT GCG-TGA CTT TCATCGC TTTTTTGCGGCAATT TERM 1817 1657277 - 1657312 + G 70 -11.1 -3.35679 | overlap 1657276 1657275 CAAACACCCGTTTAT CGCGACCGCGACTTT CTCGGC ACAGTCGCGGCCGTG TTCTCGATCGAAGGG Bphy_1471 1656683 - 1659208 + | multi-sensor signal transduction histidine kinase TERM 1818 1659565 - 1659543 - g 76 -9.8 -4.1899 | overlap 1659556 GGACTTCATCGAAAA GCCGTTCGAC GAA GCCGAACTGC GCAAGCTGGTCGAGC TERM 1819 1659638 - 1659608 - g 77 -12.4 -3.64822 | AGGCGCGCAGCGAAA GCAGCAGCGTGCAG CAG CAGCGCGCCGCCGC CGAGCGCCTCGGCAA Bphy_1472 1659205 - 1659849 + | two component LuxR family transcriptional regulator TERM 1820 1660145 - 1660125 - f 77 -13.9 -2.8805 | ATCAGTCGCGATACA CGGGCGCCG GAC CGGCGCGCG ATCGCACAACACAGC Bphy_1473 1660202 - 1661512 + | hypothetical protein TERM 1821 1661930 - 1661918 - g 74 -4.7 -4.58395 | overlap 1661920 GCCACGGCCGAAAAA GCGTG CAC CTCGC TGTCGGCGACGGTGA Bphy_1474 1661602 - 1662516 + | hypothetical protein Bphy_1475 1662868 - 1663725 + | methenyltetrahydrofolate cyclohydrolase TERM 1822 1664869 - 1664855 - g 81 -11.4 -4.12188 | opp_overlap 1664864 GCAGTACTCGGAAAA TCGCGC GAT GCGCGA AACGATGTACCGCGC Bphy_1476 1664151 - 1666265 + | oligopeptidase A TERM 1823 1666352 - 1666378 + T 82 -8.6 -4.41494 | overlap 1666339 1666338 1666353 TTCGGGCACACGCGA AGCGGGCTCGGT TTT ACCGAACTCGCC TTTTCATTCGCGATG TERM 1824 1666353 - 1666377 + T 75 -12.1 -3.24414 | overlap 1666339 1666338 1666352 TCGGGCACACGCGAA GCGGGCTCGGT TTT ACCGAACTCGC CTTTTCATTCGCGAT Bphy_1477 1667671 - 1666382 - | amidohydrolase 3 TERM 1825 1666949 - 1666992 + g 71 -9.5 -3.70902 | gap 1 CAGATGCGAACCCGT CACGCGTCCGTGCAGGCCTA GCCGA TGGGCTTGCGCGG-CGAGCG TTTCGATGTGACGCG TERM 1826 1667994 - 1668032 + H 100 -10.9 -5.18355 | opp_overlap 1667994, overlap 1668000 CGGCAGCTTCAAGCA TCCGAAGCCCGCATCGC CTCAA GCGTTGCGGGCTTTTGC TTTTTGCTTTTTGCC TERM 1827 1668000 - 1668026 + H 100 -15.1 -4.81523 | opp_overlap 1667994, overlap 1667994 CTTCAAGCATCCGAA GCCCGCATCGC CTCAA GCGTTGCGGGC TTTTGCTTTTTGCTT Bphy_1478 1668146 - 1668922 + | exodeoxyribonuclease III Xth TERM 1828 1668943 - 1668975 + T 100 -22.8 -3.9941 | opp_overlap 1668943 GGCAGCAAAGACAAA GCGGCTCGATGGCG CATCA CGCCGTCGAGCCGC TTTCGTTGTGCCACA TERM 1829 1668975 - 1668943 - T 100 -21.3 -4.36903 | opp_overlap 1668943 GGCAGCAAAGACAAA GCGGCTCGATGGCGC ATC ACGCCGTCGAGCCGC TTTCGTTGTGCCACA Bphy_1479 1670543 - 1669029 - | nitrogen metabolism transcriptional regulator, NtrC, Fis family TERM 1830 1669622 - 1669582 - G 77 -11.7 -3.72576 | CTCTTCTGCAGGAAA TGGCGCGTGAGCAGCGGAA TGT CTTCGCTGCGCTCGCGCAA CGCAGGCAGACGCAG TERM 1831 1670439 - 1670486 + g 81 -7.6 -4.56597 | gap 1, overlap 1670421 CGCGCCCGCGGCTTC GCGCACGTTCGCGA-AGCTGCGC GTC GCAAAGTTCTCGCGGGCGAGTGC TTTTTCGAGCACCCA Bphy_1480 1671732 - 1670590 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 1832 1671815 - 1671797 - R 100 -16 -4.88407 | opp_overlap 1671797 CGATCCAACGAAAAA GGGACGGC GCC GCCGTCCC TTCATGACCGATCGC TERM 1833 1671797 - 1671815 + r 88 -16 -3.14931 | opp_overlap 1671797 CGATCCAACGAAAAA GGGACGGC GCC GCCGTCCC TTCATGACCGATCGC Bphy_1481 1673297 - 1671882 - | glutamine synthetase, type I TERM 1834 1672965 - 1672994 + g 84 -14.3 -3.59979 | gap 1, opp_overlap 1672950 CGCTTCCGCGCGCTT GGCGAGCGAGCGCG GGT CGCGCTCG-TAGCC TTTGCCGTCAGCCGG TERM 1835 1673412 - 1673400 - H 70 -4.8 -4.48987 | GCCTCACAAGGAAAA GTGC TTACT GCAC CGCGCCAGTTCGATC Bphy_1482 1673713 - 1674177 + | hypothetical protein TERM 1836 1674239 - 1674268 + T 100 -16.5 -3.94877 | gap 1 GATACGTCTCGAACC GGCGGCGCACG-CA GCA TGTCGTGTGCCGCC TTGTTATTGAACCGT Bphy_1483 1675179 - 1674346 - | molybdopterin binding domain-containing protein Bphy_1484 1676061 - 1675192 - | hypothetical protein TERM 1837 1676047 - 1676028 - G 72 -7 -4.21974 | overlap 1676029 GGAGCACCGAAGAAA GCGCGCGC CCAA ACGAGCGC AAGAGGTCATTCATT TERM 1838 1676268 - 1676298 + r 70 -3.8 -4.57073 | opp_overlap 1676255, overlap 1676266 1676272 AAGGGATCGGGATGC GCGCCGGCGCGC TTACGCC GTGCCCCGCTGC TTTTTGCCGGACATG Bphy_1485 1677263 - 1676280 - | fatty acid hydroxylase TERM 1839 1676568 - 1676532 - G 74 -10.8 -3.72695 | gap 1 ATGGCGTCGATGAAA CGTCGGGCT-GACGAGC AAGC GCTCGCCGAGCCAGCCG AAATACAGCCGGATG Bphy_1486 1678358 - 1677345 - | YVTN beta-propeller repeat-containing protein TERM 1840 1678319 - 1678287 - G 78 -3.2 -4.96848 | gap 1, overlap 1678289 1678305 GGCGGGAGAGAAAAA GCTCGCTGCCGCGAC GAAC GCCGCGCCTGCT-GC AAACGTGCCAGTCAA TERM 1841 1678473 - 1678435 - H 70 -2.1 -4.72272 | gap 1, opp_overlap 1678444, overlap 1678436 TCGGTCGAGGAAAAA TGTGGGCTCGCGGC-GCG CTGC CGCAGACGCGCGCCGGCT CGCTTGCGGGGGGCG TERM 1842 1679221 - 1679168 - g 73 -13.7 -2.90075 | gap 1 CCGTCGGCAACTACA CGACCGCGCTCGGCGCGCACGCGCGT GCG ATG-GCGGGCGCGTCGACAGCGATCG GCGACACCGCACAGG Bphy_1487 1678882 - 1680300 + | YadA domain-containing protein Bphy_1488 1684787 - 1680399 - | ATP-dependent helicase HrpA TERM 1843 1682239 - 1682220 - G 71 -9.2 -3.73647 | opp_overlap 1682218, overlap 1682221 GCCACGGATGAACAA TTCCCGCG CGCG CGCGGGAT CCTGCTTGCCGAAGC TERM 1844 1682318 - 1682328 + g 72 -8.2 -4.11394 | overlap 1682317 CGAATGCCGTCACCT GCGC GGC GCGC TTTTCCCAGTGCGGT TERM 1845 1683761 - 1683789 + g 79 -5.8 -4.67982 | CGACGGGATACAGCC GCCCGCTCACTT CGATC ACGGGCGCGGGC TTTTCTTCGCTGCCG TERM 1846 1684028 - 1683998 - G 75 -7.6 -4.25104 | gap 1, overlap 1683999 TTTCCGCGAGCAAAA TGC-CGTCCGTCA TCAGCT TGACGGACGCGCC GGGCGAGAGATTGTC TERM 1847 1684506 - 1684524 + g 78 -13.8 -3.29461 | overlap 1684496 1684517 1684518 GCCCTGCCGGTCCTG CCGCGCGT TCT GCGCGCGG TTCTCCGCGCGATTC TERM 1848 1684518 - 1684535 + g 70 -14.1 -2.58544 | overlap 1684506 1684517 CTGCCGCGCGTTCTG CGCGCGG TTCT CCGCGCG ATTCTGCGCCTCCCG TERM 1849 1684652 - 1684679 + g 75 -9.8 -3.96624 | overlap 1684654 1684663 1684664 1684665 TCACGGAAACGTCAC TGCGAGGTGCGT TGCC GCGCGCCTCGTG TTTCTCGTGCCGATG TERM 1850 1684654 - 1684677 + g 77 -12.4 -3.57406 | overlap 1684652 1684663 1684664 1684665 ACGGAAACGTCACTG CGAGGTGCGT TGCC GCGCGCCTCG TGTTTCTCGTGCCGA TERM 1851 1684664 - 1684719 + g 88 -16 -3.4268 | gap 1, overlap 1684654 1684652 1684663 1684665 1684713 CACTGCGAGGTGCGT TGCCGCGCGCCTCGTGTTTCTCGTGCC GAT GGC-CGCGCGGCACGGGGTTCGCGGCG TCTTTCGCGTTATCG TERM 1852 1684665 - 1684718 + g 83 -17.3 -2.65126 | gap 1, overlap 1684654 1684652 1684664 1684663 1684713 ACTGCGAGGTGCGTT GCCGCGCGCCTCGTGTTTCTCGTGCC GAT GGC-CGCGCGGCACGGGGTTCGCGGC GTCTTTCGCGTTATC TERM 1853 1684756 - 1684768 + g 81 -9.1 -4.21275 | GCGTTTTTCGTATCG GCTCC AGC GGAGC TTTTGGGTACATTCG TERM 1854 1685369 - 1685404 + G 79 -10.4 -4.07568 | gap 1, overlap 1685369 1685388 ATCCGTCAATCGCTT G-CGAGCGGCAAGATCG TGC TGCTCTCGCCGCTCGGC TTTTCGCCGACGGGC Bphy_1489 1684811 - 1686190 + | amino-acid N-acetyltransferase Bphy_1490 1686246 - 1686521 + | Fe(II) trafficking protein YggX TERM 1855 1686575 - 1686557 - f 70 -11.7 -2.75481 | opp_overlap 1686557 1686570 CTCGAATCCCAACCA TCCGCGC TCGAT GCGCGGA TTTTTTTCGTGTGCA TERM 1856 1686557 - 1686575 + F 100 -11.7 -5.58454 | opp_overlap 1686557, overlap 1686570 CTCGAATCCCAACCA TCCGCGC TCGAT GCGCGGA TTTTTTTCGTGTGCA TERM 1857 1686734 - 1686720 - f 80 -9.2 -4.25104 | opp_overlap 1686722 1686723, overlap 1686697 GCGCGTTGAGCAAAA GCCCGC CCG ACGGGC GATTTGCACGAACCT Bphy_1491 1687264 - 1688733 + | general substrate transporter TERM 1858 1688764 - 1688785 + T 100 -12.3 -5.26316 | opp_overlap 1688758 1688764 CGCACAGGACTGAAA CGGGTCAGC TTCG GCTGATCCG TTTTTTATGGCGTCA TERM 1859 1688785 - 1688764 - T 75 -10.1 -3.70149 | opp_overlap 1688764, overlap 1688758 CGCACAGGACTGAAA CGGGTCAGC TTCG GCTGATCCG TTTTTTATGGCGTCA Bphy_1492 1689272 - 1688790 - | phosphodiesterase Bphy_1493 1690077 - 1689289 - | hypothetical protein TERM 1860 1689520 - 1689497 - G 83 -9.5 -4.43189 | overlap 1689487 1689499 AGCAACGCGACAAAA GGCGCACCG TGCGCG CGCTGCGCC GAGACGGCGAGCACG Bphy_1494 1690656 - 1690081 - | hypothetical protein Bphy_1495 1691104 - 1690772 - | cupin 2 domain-containing protein Bphy_1496 1692529 - 1691126 - | pyridine nucleotide-disulphide oxidoreductase dimerisation region TERM 1861 1691817 - 1691764 - G 100 -15.1 -4.63218 | gap 1, overlap 1691765 CGCTGCCGAAGAAAA TCCGCACGCCGTCGC-CGTCGTGCTG CAA CGGCTCGACGCGCGACGGCTCGCCGC CAAAGCGGAATTCGA TERM 1862 1691816 - 1691765 - G 93 -18.6 -3.3761 | gap 1, overlap 1691764 GCTGCCGAAGAAAAT CCGCACGCCGTCGC-CGTCGTGCTG CAA CGGCTCGACGCGCGACGGCTCGCCG CCAAAGCGGAATTCG Bphy_1497 1692848 - 1692657 - | hypothetical protein Bphy_1498 1693820 - 1693119 - | glutathione S-transferase domain-containing protein Bphy_1499 1693928 - 1694215 + | hypothetical protein TERM 1863 1694612 - 1694588 - f 76 -3.5 -4.99638 | gap 1, overlap 1694589 ATAGCCAGATAAAAA TCCCGCTCAG CGTTAC CTG-GCGGGG TGCATGGCGAATCTT TERM 1864 1694883 - 1694871 - f 80 -4.7 -4.93877 | opp_overlap 1694880 1694881 CGGCAGGAAAGAAAA CGGGC TTG GCTCG GCGTTGCCTCGGCGC TERM 1865 1695187 - 1695160 - f 79 -12.6 -3.36518 | overlap 1695162 CGAAAACGTTTACAA CACCGCGCGGCG GCAA CGCCGCTCGGCA CAGGCTGACGGGAAA TERM 1866 1695185 - 1695162 - f 87 -15.2 -3.24563 | overlap 1695160 AAAACGTTTACAACA CCGCGCGGCG GCAA CGCCGCTCGG CACAGGCTGACGGGA TERM 1867 1695237 - 1695248 + G 72 -7.2 -4.27316 | ATCAAGGATGTCGCT GCCC ACGC GGGC TTTTCGATTGCGACC TERM 1868 1695339 - 1695318 - g 79 -6.5 -4.58395 | overlap 1695320 1695331 GTGACCCTCGAAAAA GTGCGTCAA TCGA TCGACGCGC TCAACTTCCGTCCGA Bphy_1500 1695210 - 1696283 + | LacI family transcription regulator Bphy_1501 1696343 - 1697389 + | extracellular solute-binding protein TERM 1869 1697404 - 1697446 + G 80 -14.9 -3.15841 | gap 2, overlap 1697402 1697442 AACGACATCACTTTT CCGC-TGCGCTGGCGC-ATCG CGT TGATCGCGCCGGCGCTCGCGG TGTTCATCGCGTTCT Bphy_1502 1697386 - 1698210 + | binding-protein-dependent transport systems inner membrane component Bphy_1503 1698216 - 1699154 + | binding-protein-dependent transport systems inner membrane component TERM 1870 1699400 - 1699388 - g 72 -3.3 -4.65895 | opp_overlap 1699374 1699390, overlap 1699389 1699390 CTGCCGATCGAAAAA CGCCA GGT CGGCA TGGTGTTCCAGAGCT Bphy_1504 1699151 - 1700203 + | ABC transporter related Bphy_1505 1700340 - 1701167 + | metallophosphoesterase Bphy_1506 1701294 - 1702508 + | major facilitator transporter Bphy_1507 1703011 - 1702580 - | response regulator receiver protein Bphy_1508 1703754 - 1703044 - | two component LuxR family transcriptional regulator Bphy_1509 1704342 - 1703797 - | Ferritin Dps family protein Bphy_1510 1704600 - 1704439 - | hypothetical protein Bphy_1511 1704869 - 1704693 - | hypothetical protein TERM 1871 1705652 - 1705666 + G 72 -12.8 -3.14132 | opp_overlap 1705647 1705648 1705645 ACAACGAAGAGCGCC GCGCGC AAC GCGCGC TTGATGCGAGCCGCG TERM 1872 1705941 - 1705905 - g 75 -3.7 -4.68645 | opp_overlap 1705927, overlap 1705907 1705936 CAGCGAAAACGAAAA GACCCAGCTCG-CGCGC GAACT GCACGACGAACTCGG-C GCGATTCTCACAGCG TERM 1873 1705940 - 1705907 - g 70 -7.4 -3.94465 | gap 1, opp_overlap 1705927, overlap 1705905 1705936 GCGAAAACGAAAAGA CCCAGCTCG-CGCGC GAACT GCACGACGAACTCGG CGCGATTCTCACAGC Bphy_1512 1705096 - 1706640 + | integral membrane sensor signal transduction histidine kinase Bphy_1513 1706891 - 1707028 + | entericidin EcnAB TERM 1874 1707076 - 1707098 + T 100 -14.8 -4.8048 | CATCACGTACTGCAA GCCGCCGCGT CTG ACGCAGCGGC TTTTTCATGTCGACG TERM 1875 1707149 - 1707124 - T 100 -19.1 -3.82946 | opp_overlap 1707119 CGACGCCAAACACAA CGGCGGCTCAT CCGC ATGAGCCGCCG CGCCGTTTCCCCGTG Bphy_1514 1707988 - 1707200 - | putative lipoprotein TERM 1876 1707967 - 1707981 + g 79 -6.4 -4.54727 | opp_overlap 1707943, overlap 1707943 1707940 CTCCGACGAGCACCG CGATCG TTC TGATCG TTTTCATTTGCCACC TERM 1877 1709431 - 1709396 - g 79 -10.3 -4.10657 | TCACACGTTTCAAAA CCAGCGCGCGACCTG CCTCGT CAATCCGCGCGCGGG CCGCGAGACGGAACT Bphy_1515 1708350 - 1710410 + | NADH:flavin oxidoreductase/NADH oxidase Bphy_1516 1711358 - 1710438 - | hypothetical protein Bphy_1517 1711499 - 1711747 + | hypothetical protein Bphy_1518 1712223 - 1714154 + | thiamine biosynthesis protein ThiC TERM 1878 1714189 - 1714212 + F 100 -11 -5.08011 | opp_overlap 1714184 1714189 TGCCCGGAAAGCGAA GCCCGCCA GTTGTTCA TGGCGGGC TTTTTTGCGCGTTTT TERM 1879 1714212 - 1714189 - f 71 -11 -3.27525 | opp_overlap 1714189, overlap 1714184 TGCCCGGAAAGCGAA GCCCGCCA GTTGTTCA TGGCGGGC TTTTTTGCGCGTTTT Bphy_1519 1714429 - 1714641 + | hypothetical protein TERM 1880 1714801 - 1714839 + F 88 -14.6 -3.5882 | gap 1, opp_overlap 1714798 ACGCCGAAGGGAGAT GGGCAGAGTCCGGCGCG CACGTA CGCGCCGGACA-TGTCC TTTACGGGTGATCTC Bphy_1520 1715037 - 1715639 + | hypothetical protein TERM 1881 1715648 - 1715692 + F 84 -12.9 -3.65812 | gap 2, opp_overlap 1715641 1715644 1715682, overlap 1715627 GCATTGAACGATCGG GCAAGGCGCGCGGTTCGTCGC CCGAT GCTACGAACCG-GCGCCC-GC TTCTATTCCCGCAAC Bphy_1521 1715909 - 1717507 + | L-lactate transport TERM 1882 1717599 - 1717613 + F 72 -8.5 -3.86733 | overlap 1717601 TAAACCGCATCCCCG CCGGC CGGTT GCCGG TTCTTGCTATTTCAT Bphy_1522 1717666 - 1718640 + | hypothetical protein TERM 1883 1719186 - 1719214 + T 100 -16 -4.57569 | opp_overlap 1719186 GCAGGCAACAAAAAA GCCCGCGTAACG CAATC CGTCACGCGGGC TTTTTAGACGGCTGC TERM 1884 1719214 - 1719186 - T 100 -18.2 -5.4833 | opp_overlap 1719186 GCAGGCAACAAAAAA GCCCGCGTAACG CAATC CGTCACGCGGGC TTTTTAGACGGCTGC Bphy_1523 1720484 - 1719252 - | putative exported lipoprotein TERM 1885 1719738 - 1719786 + g 87 -14.6 -3.61715 | opp_overlap 1719745 TTGCGACCCCGCGGG CGACACAGGCGCGACG-GCCGCCG CAT TGGCGGTGCG-CGTGCTCGTGTCG TTCTTCGCCAGCGTC TERM 1886 1719882 - 1719905 + g 72 -3 -4.68593 | gap 1, overlap 1719885 1719885 CGTGTCGTTGTTCGC GCCGCTGAGCG CTT CGCGCAG-GCC TTTTTGGCTGATGAA TERM 1887 1721473 - 1721490 + G 76 -9.1 -4.18197 | gap 1 CGCGCGTGGCTGCCC GCCGC-CG TTC CGAGCGGC TTTTCGCTCGCCGAT Bphy_1524 1721035 - 1721514 + | hypothetical protein TERM 1888 1722646 - 1722672 + G 82 -6.5 -4.65895 | gap 1, overlap 1722648 GGCAACGCTAACGGG GACCGACGGTGC ATCG GCATCG-CGGGC TTTTTCGATCGCCAA Bphy_1525 1721525 - 1722850 + | hypothetical protein TERM 1889 1722930 - 1722897 - T 73 -11.7 -3.14132 | opp_overlap 1722898 CGGTCTTCCTACGAA CGCTGGCGTGCTATC CCGA GACACCACGCCAGCT TTCCAGCCGTGATCA TERM 1890 1722898 - 1722929 + T 81 -13 -3.54741 | opp_overlap 1722897 GGTCTTCCTACGAAC GCTGGCGTGCTATC CCGA GACACCACGCCAGC TTTCCAGCCGTGATC Bphy_1526 1725150 - 1722943 - | YadA domain-containing protein Bphy_1527 1725766 - 1725536 - | hypothetical protein Bphy_1528 1726372 - 1725896 - | hypothetical protein TERM 1891 1726443 - 1726426 - R 71 -8.3 -4.06502 | GACGCGCAAAGCAAA GGCCGCC CGGG GGCGCCC TCGAAGCGACTCATA Bphy_1529 1727238 - 1726471 - | ABC transporter related TERM 1892 1727293 - 1727262 - R 78 -8.6 -4.14243 | gap 1 TACCCGACGTGAAAA GCGCGTGACG-GCCG AAG CGGCGCTCCAGGCGC ACCTGCGCGGACGAC Bphy_1530 1727919 - 1727242 - | polar amino acid ABC transporter, inner membrane subunit Bphy_1531 1728723 - 1727941 - | extracellular solute-binding protein TERM 1893 1728800 - 1728833 + r 70 -5.1 -4.41348 | overlap 1728789 TCTCCCGGACTATGC GTCCGGTTGCGTCGG CGGA CTGTAGCAAACGGGC TTTATTTCCACAACG Bphy_1532 1730655 - 1729204 - | dihydropyrimidinase Bphy_1533 1732199 - 1730688 - | NCS1 nucleoside transporter TERM 1894 1732220 - 1732251 + r 83 -4.4 -5.03314 | gap 1 GTTCTCCACTTGACC GCTCGTTGACTGGGG TGC CCTTA-TCAGCGTGC TTTTTTCAGGCTGCC Bphy_1534 1733567 - 1732257 - | dihydroorotate dehydrogenase family protein Bphy_1535 1734966 - 1733617 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bphy_1536 1736359 - 1735082 - | amidase TERM 1895 1736541 - 1736558 + H 71 -11.3 -3.29511 | GCGCGCTTTGTGAAT CCTGTCC GAAT GGACAGG TTGTAGCCGACTAAA Bphy_1537 1736756 - 1737460 + | TetR family transcriptional regulator Bphy_1538 1738724 - 1737474 - | benzoyl-CoA oxygenase/reductase, BoxA protein Bphy_1539 1740197 - 1738770 - | benzoyl-CoA oxygenase component B (BoxB) Bphy_1540 1741932 - 1740250 - | benzoyl-CoA-dihydrodiol lyase TERM 1896 1741053 - 1741068 + g 77 -11.8 -3.57263 | CGATATCCAAAGGTT GCGCCG TCGA CGGCGC TTTGGCCGTGAACGT Bphy_1541 1743020 - 1742067 - | XRE family transcriptional regulator Bphy_1542 1743274 - 1743753 + | hypothetical protein Bphy_1543 1743823 - 1745421 + | benzoate-CoA ligase family Bphy_1544 1745430 - 1746284 + | alpha/beta hydrolase fold protein Bphy_1545 1746547 - 1746891 + | hypothetical protein TERM 1897 1747410 - 1747389 - g 81 -3.6 -5.00616 | TGGGTGCCGAAAAAA GGCACGAC GACAAT GGCGTACC TCACACGCGACGACA TERM 1898 1748701 - 1748731 + G 71 -7.5 -4.07568 | GTTCCTACGACTTCA CGGTGCATGGACC GAACG GGTTCCTGCGTCG TTTTGCCGGCAAGCA Bphy_1546 1746966 - 1749080 + | phospholipase C, phosphocholine-specific TERM 1899 1749135 - 1749109 - T 100 -16.6 -4.33105 | opp_overlap 1749109 GAACGATGAGCAAAA GCCCGTATCGTC GTC GACGGTACGGGC TTTTCCTACGCGTCA TERM 1900 1749109 - 1749135 + T 100 -18.8 -4.26076 | opp_overlap 1749109 GAACGATGAGCAAAA GCCCGTATCGTC GTC GACGGTACGGGC TTTTCCTACGCGTCA Bphy_1547 1749875 - 1749171 - | glutathione S-transferase domain-containing protein Bphy_1548 1751049 - 1749979 - | hypothetical protein TERM 1901 1750315 - 1750298 - G 79 -5.5 -4.65895 | overlap 1750300 GGGGCCACGGAAAAA TACGCAC CCGT GCGCGCA CTTCCCAGATGACGC Bphy_1549 1757068 - 1751075 - | excinuclease ABC, A subunit TERM 1902 1752347 - 1752307 - G 95 -15.4 -4.1891 | overlap 1752303 TCGTTGCAAGAGAAA CGGGACGCCGCTCCTGCA ACGGG TGCAGGATCGGCTTCGCG AGGAATTGTCCCGTC TERM 1903 1754320 - 1754303 - G 70 -11.3 -3.36273 | opp_overlap 1754305 1754307, overlap 1754307 CTCGTCGAACATGAA CAGACGC GCTG GCGTCTG CTTCGCGCCACCGCG TERM 1904 1756895 - 1756928 + g 72 -3.1 -4.6902 | gap 1, overlap 1756916 CGGCCCTGTAACCAC CGTC-ATTTCGCCCGT GCG AAGGTCGAGGTCGACG TTTTTCAGGTTGTGC TERM 1905 1757298 - 1757282 - H 100 -9.4 -5.61881 | GCTGAAAAAGAAAAA CCCGGT GGAGA ACCGGG TTCGAATGGCCGTCC TERM 1906 1757853 - 1757833 - g 100 -15.4 -4.25283 | opp_overlap 1757822 1757844 AGCGCTTCATGAAAA CGGGCGGC GCATT GCCGCCCG ACGGCGTCAAGTTGC Bphy_1550 1757763 - 1758047 + | hypothetical protein TERM 1907 1758193 - 1758168 - T 100 -14.1 -4.65895 | opp_overlap 1758168 CCGCGCAGTTAAAAA GGACTTACGGC TTTC ACCGTAAGTCC TTTTTTGTCCATCTG TERM 1908 1758168 - 1758193 + T 100 -13.4 -5.29782 | opp_overlap 1758168 CCGCGCAGTTAAAAA GGACTTACGG CTTTCA CCGTAAGTCC TTTTTTGTCCATCTG Bphy_1551 1758753 - 1758355 - | MerR family transcriptional regulator Bphy_1552 1759161 - 1758808 - | integration host factor, alpha subunit TERM 1909 1758882 - 1758914 + g 70 -5.7 -4.26189 | gap 3, opp_overlap 1758874 CGTGAAACGTCACGA CGCGGCGAGCAGCGAT GGGA ATCGC--CTCGCC-CG TTTTCGGATTTCTGC Bphy_1553 1761705 - 1759273 - | phenylalanyl-tRNA synthetase, beta subunit TERM 1910 1760770 - 1760787 + g 71 -12.7 -2.95223 | TTCGATATGCCGATC GTCGGCG ATCA CGCCGAC TGTCTCGTCGACTTC TERM 1911 1761850 - 1761827 - R 71 -10.2 -3.57144 | CCGCGCATGCTTAAA GCCTGCTCGC TCAA GCGAACTGGC GCAGGAAACGCAGGT Bphy_1554 1762859 - 1761837 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 1912 1762757 - 1762776 + g 79 -10.8 -4.10161 | GTACGCCCGACTTGC CGAGAAAG CGTG CTTTCTCG TTTTCGAGCGTGGTG TERM 1913 1762911 - 1762932 + r 90 -7.2 -5.06816 | opp_overlap 1762912, overlap 1762912 CTCGACCAACAAAAA AGGGGCTC GGTGAG GAGCCCCG TTTTTGTTGCAGCGT TERM 1914 1762931 - 1762912 - R 100 -10.7 -5.5112 | opp_overlap 1762911 1762912 TCGACCAACAAAAAA GGGGCTC GGTGAG GAGCCCC GTTTTTGTTGCAGCG TERM 1915 1762912 - 1762931 + r 71 -10.7 -3.63367 | opp_overlap 1762912, overlap 1762911 TCGACCAACAAAAAA GGGGCTC GGTGAG GAGCCCC GTTTTTGTTGCAGCG Bphy_1555 1763368 - 1763009 - | ribosomal protein L20 Bphy_1556 1763595 - 1763398 - | ribosomal protein L35 Bphy_1557 1764322 - 1763852 - | translation initiation factor IF-3 Bphy_1558 1766334 - 1764427 - | threonyl-tRNA synthetase TERM 1916 1766429 - 1766404 - R 100 -16.1 -5.93809 | opp_overlap 1766399 1766398 CCGGGACAAAAAAAA TGCGGCCCCGC TTTC GAGGGGCCGCA TTCACGTTTCTGCGT Bphy_1559 1769032 - 1766792 - | (p)ppGpp synthetase I, SpoT/RelA Bphy_1560 1769444 - 1769091 - | endoribonuclease L-PSP Bphy_1561 1770468 - 1769548 - | alpha/beta hydrolase fold protein TERM 1917 1770640 - 1770611 - R 100 -19.3 -4.17762 | opp_overlap 1770613 1770628, overlap 1770613 GAGCGCCCAAAAGAA GAGCGGGCGCGAC CTGC GTCGCGCCCGCTT TGCGGCAACCGCACC TERM 1918 1770613 - 1770638 + r 100 -21.9 -3.53012 | opp_overlap 1770611 1770613, overlap 1770628 GCGCCCAAAAGAAGA GCGGGCGCGAC CTGC GTCGCGCCCGC TTTGCGGCAACCGCA TERM 1919 1770638 - 1770613 - R 100 -21.9 -3.68435 | opp_overlap 1770613 1770628, overlap 1770611 GCGCCCAAAAGAAGA GCGGGCGCGAC CTGC GTCGCGCCCGC TTTGCGGCAACCGCA Bphy_1562 1771319 - 1770678 - | 3-oxoacid CoA-transferase, B subunit Bphy_1563 1772026 - 1771322 - | 3-oxoacid CoA-transferase, A subunit TERM 1920 1771993 - 1772007 + g 72 -12.8 -3.09234 | overlap 1771985 TGACGATGCCTTCGA GCGCGG CTG CCGCGC TTGCGTAGACTTTAT Bphy_1564 1772303 - 1772848 + | LuxR family transcriptional regulator Bphy_1565 1773336 - 1772908 - | thioesterase superfamily protein Bphy_1566 1774328 - 1773552 - | short-chain dehydrogenase/reductase SDR TERM 1921 1773976 - 1773966 - G 74 -2.4 -4.72272 | opp_overlap 1773954 1773966 1773966 1773975 CTGCGCGACGAAAAA CGCG CCG CGTG TGTTCGTGTCGAACA Bphy_1567 1774515 - 1776188 + | electron-transferring-flavoprotein dehydrogenase TERM 1922 1776202 - 1776220 + T 100 -16 -4.68593 | opp_overlap 1776202 GAGTTCGACAAAAAA CGCCGCTC GAC GAGCGGCG TTTTTGCGTCATGGC TERM 1923 1776220 - 1776202 - T 100 -16 -5.252 | opp_overlap 1776202 GAGTTCGACAAAAAA CGCCGCTC GAC GAGCGGCG TTTTTGCGTCATGGC Bphy_1568 1777715 - 1776252 - | TPR repeat-containing protein Bphy_1569 1778862 - 1777762 - | chorismate synthase Bphy_1570 1780952 - 1779015 - | phospholipid/glycerol acyltransferase TERM 1924 1780176 - 1780164 - G 76 -9.1 -4.11235 | overlap 1780152 GAACGACGACAGAAA CGTCG CGC CGACG AACCACAACCAGGAA TERM 1925 1780902 - 1780914 + g 71 -10.5 -3.60792 | opp_overlap 1780887 1780864 CTGCGAGCCGTGCTC GCGCG CGC CGCGC TTTGCGCGTTGGACG TERM 1926 1781041 - 1781023 - R 100 -13.1 -5.36441 | GGCGGACACAAAAAA GCGCGCG GATCA CGCGCGC TTCAGGATGATGCAG Bphy_1571 1781607 - 1781110 - | CBS domain-containing protein TERM 1927 1781777 - 1781762 - H 72 -4.6 -4.58685 | overlap 1781766 1781767 AAAGGTCTGCAAAAA GGAAGC GGAC GCCCCC GCCGACAGCGCGCCA TERM 1928 1781816 - 1781766 - H 72 -8.7 -3.80855 | gap 1, overlap 1781762 1781767 GTCTGCAAAAAGGAA GCGGACGCCCCCGCCGACAGCGCG CCAG CGCACGTCCGGCGGGCGGGAC-GC ACGGGCCTGCCCGCG TERM 1929 1782967 - 1783001 + G 74 -13.5 -3.30038 | gap 1, overlap 1782963 1782969 CCGATCACGCGCTCG CCCAGCGCCTGCTGCC GCGC GGC-GCAGGCGCCGTG TTCAGTTTCGATCTG TERM 1930 1782969 - 1782999 + G 83 -14.7 -3.21063 | gap 1, overlap 1782967 1782963 GATCACGCGCTCGCC CAGCGCCTGCTGCC GCGC GGC-GCAGGCGCCG TGTTCAGTTTCGATC Bphy_1572 1781979 - 1783313 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Bphy_1573 1783310 - 1784155 + | alpha/beta hydrolase fold protein Bphy_1574 1784295 - 1784618 + | hypothetical protein Bphy_1575 1785980 - 1784661 - | ribonuclease BN TERM 1931 1785308 - 1785291 - G 76 -6.3 -4.52589 | gap 1 GCGCCGGATATAAAA GCCGAAGC CGC GCTT-GGC CAGTTCGAACGCGAT TERM 1932 1786119 - 1786103 - H 72 -5 -4.57837 | AGACGTGCGCAAAAA CGCGGG ACGAA CTCGCG GCACTGTCGGCGAAC TERM 1933 1786764 - 1786707 - g 88 -15.7 -3.41024 | gap 3, overlap 1786705 CTGCCGAAGAGAAGA CGCTC-GCCATCG-CGC-TCGGTGCGCG GATCG CGCGCACGGCCGCGTCGATGACCGAGCG GCCCTGAGCATGCCG Bphy_1576 1786163 - 1786771 + | flavoprotein WrbA Bphy_1577 1786774 - 1787199 + | hypothetical protein Bphy_1578 1787311 - 1788738 + | FAD linked oxidase domain-containing protein TERM 1934 1789379 - 1789403 + G 76 -9.3 -4.08216 | gap 1 TTACGCATCACGCGC CGCATCGGCG CAGTCT CGCCGA-GCG TTTTGCGGACGATCC Bphy_1579 1788778 - 1789620 + | metallophosphoesterase Bphy_1580 1789801 - 1789640 - | hypothetical protein Bphy_1581 1790907 - 1789969 - | LysR family transcriptional regulator Bphy_1582 1791074 - 1792621 + | RND efflux system outer membrane lipoprotein TERM 1935 1793156 - 1793176 + G 73 -11.8 -3.34398 | overlap 1793154 TCGGCATTCTGTGCT CGGGCGCG GTGAG CGCGCTCG TGTTTCCGCAGCACG Bphy_1583 1792636 - 1794870 + | fusaric acid resistance protein region Bphy_1584 1794860 - 1795060 + | hypothetical protein Bphy_1585 1795078 - 1795938 + | secretion protein HlyD family protein TERM 1936 1795928 - 1795940 + T 85 -3.3 -5.36441 | GTACTGTGGTTGTTA CGCCA TCC TGACG TTTTTTGTCTGCGAC Bphy_1586 1797751 - 1796090 - | methyl-accepting chemotaxis sensory transducer TERM 1937 1796937 - 1796961 + g 93 -15.7 -3.91911 | opp_overlap 1796937 ATGTCGTTCGACAGA TCGCCAGCCGC GAT GCGGCTCGCGA TTTCCTTCGCGTACA TERM 1938 1796961 - 1796937 - G 80 -15.7 -2.87211 | opp_overlap 1796937 ATGTCGTTCGACAGA TCGCCAGCCGC GAT GCGGCTCGCGA TTTCCTTCGCGTACA TERM 1939 1797480 - 1797445 - G 85 -17 -3.01712 | gap 1, opp_overlap 1797418 1797465, overlap 1797448 1797479 TCGTCGCCGTCAATA GC-ATCTTCTGGGCGCG GCT CGCGCGCAGAAGATAGC CGCGCGCTTCCTCGG TERM 1940 1797476 - 1797448 - G 84 -17.5 -2.73875 | opp_overlap 1797465, overlap 1797445 TCGCCGTCAATAGCA TCTTCTGGGCGCG GCT CGCGCGCAGAAGA TAGCCGCGCGCTTCC TERM 1941 1798246 - 1798229 - g 73 -9.8 -3.87075 | opp_overlap 1798227, overlap 1798215 1798230 ACCAGCCTCGACAAA GGCGCC CTGGCT GGCGCC GCTGCTTCGGCTTCC Bphy_1587 1798208 - 1799446 + | major facilitator transporter TERM 1942 1800947 - 1800934 - g 71 -3.7 -4.56597 | GCGTTGCCGCAAAAA CTCGG CTCT CCGGG CGTGCCCTGCTACGG Bphy_1588 1799620 - 1801620 + | propionate--CoA ligase Bphy_1589 1802448 - 1801660 - | adenosylhomocysteine nucleosidase TERM 1943 1801976 - 1801964 - G 83 -9.1 -4.36914 | opp_overlap 1801970 1801974, overlap 1801966 GCTTCCGTCACAAAA CGCTG CGA CAGCG CATCGCCCTCTTCGT Bphy_1590 1804817 - 1802445 - | UvrD/REP helicase TERM 1944 1804916 - 1804945 + H 86 -16.3 -2.73364 | opp_overlap 1804878 1804888, overlap 1804928 CGCGCCGTCTGCCGC CGGGCACGCCCCG ATTG CGCGGCGCGCCCG TGCTTGACATGCGCG TERM 1945 1805018 - 1805000 - H 79 -13.8 -3.17075 | opp_overlap 1805000 1805001 TGTCGGCCAACGCAA CGGCAGGC GCG GCCCGCCG CTCGCGCATCCCCTT TERM 1946 1805156 - 1805135 - g 70 -13.7 -2.62983 | TCGAGCCGCAGACGA TCGAGGCCC AATG GGGCCCCGA ATGGGAAAAACGCGG TERM 1947 1805181 - 1805167 - g 82 -7 -4.66833 | overlap 1805168 CCCGAATGGGAAAAA CGCGGC TAC GCCGCT CCGACGATGGAGCCG Bphy_1591 1805086 - 1807959 + | valyl-tRNA synthetase Bphy_1592 1808032 - 1808913 + | UTP-glucose-1-phosphate uridylyltransferase TERM 1948 1808973 - 1808992 + T 95 -11.4 -4.81249 | opp_overlap 1808973 GCGTGAAGTTGAGAA GCCGTCGC GTCT GTGACGGC TTTTTCAATTTGGGG TERM 1949 1809096 - 1809085 - T 74 -2.2 -4.94243 | gap 1, overlap 1809087 1809088 1809092 GCAAAAAAACCAAAA CAGGC AAC GCC-G CGCCGCAGGCAAAAC Bphy_1593 1809373 - 1809137 - | SirA family protein TERM 1950 1809241 - 1809231 - G 75 -6.8 -4.34771 | overlap 1809232 GAAAACGCAGCAAAA TCCC GCT GGGA GCCGGGATCGGTGGC Bphy_1594 1810506 - 1809484 - | oxidoreductase domain-containing protein Bphy_1595 1811525 - 1810506 - | inositol 2-dehydrogenase Bphy_1596 1812399 - 1811518 - | RpiR family transcriptional regulator TERM 1951 1811841 - 1811876 + g 71 -14.1 -2.78463 | gap 1, opp_overlap 1811838 1811861 GCTCGCGATACATCC CGCCGAAGCCCG-ACA CGAGA TGTACGCGCTTCGGCG TGTGCTGCAACGCGT TERM 1952 1812453 - 1812434 - H 80 -9.2 -4.13767 | TTTTGCAGCGCAAAA GCGCGCCT CGCA AGGCGCTC CGCGGAGCGCACGGG TERM 1953 1812522 - 1812537 + H 78 -3.3 -5.07486 | opp_overlap 1812522 ATTACCGAAAGTAAA TGGAA TGAATT TTCCA TTTTTATTGAACATG Bphy_1597 1812682 - 1813737 + | ABC sugar transporter, periplasmic ligand binding protein TERM 1954 1813794 - 1813813 + F 74 -7.1 -4.37886 | gap 1, overlap 1813770 AGCATCGCGCGACCC CGGCG-GC CCTTT GCACGCCG TTTTGTGCAGAATCG TERM 1955 1814118 - 1814069 - f 83 -13.5 -3.54741 | overlap 1814115 CAGTACGCGCTCAAA GCGCTAACCCGGATCGACCGCAC TGAC GTGCATGGGATCCGAGTAAGCGC TAAAGCGCTAACTCG TERM 1956 1814172 - 1814123 - f 90 -15.7 -3.61764 | overlap 1814115 1814169 CGAGTAAGCGCTAAA GCGCTAACTCGGATCGACCGCAC TGAC GTGCATGGGATCCGAGTAAGCGC TAAAGCGCTAACTCG Bphy_1598 1814207 - 1815364 + | monosaccharide-transporting ATPase Bphy_1599 1815382 - 1816185 + | ABC transporter related TERM 1957 1817173 - 1817204 + G 70 -14.4 -2.63596 | opp_overlap 1817193 GCCGCTCGAAGCGTG CGCGCGCACCGC GAACGCAA GCGGTGCGCTCG TCGTGTCGCGTCACG Bphy_1600 1816232 - 1818244 + | ribokinase-like domain-containing protein TERM 1958 1818322 - 1818347 + G 75 -12.5 -3.48276 | GATGGCACGATCCGT CTGACGGCGGC GCAG GCCGTCGTCCG TTATCTCGCCGCACA TERM 1959 1818536 - 1818508 - g 78 -13.1 -3.44146 | overlap 1818510 CGTGCGCACAACGAA CAGGCGATGGCGC ACA GCGCGATCGCCTT CGCCAAGGCGCACTT TERM 1960 1818534 - 1818510 - g 86 -15.7 -3.29325 | overlap 1818508 TGCGCACAACGAACA GGCGATGGCGC ACA GCGCGATCGCC TTCGCCAAGGCGCAC Bphy_1601 1818241 - 1820190 + | thiamine pyrophosphate protein central region TERM 1961 1820286 - 1820319 + G 90 -16.8 -3.31322 | overlap 1820287 GCGGCGAGACGCCCC TCGATGTCGCGCTC ACGGAA GGGCGCGACATCGG TTATCAGGGGTTCGA TERM 1962 1820287 - 1820318 + G 86 -18.1 -2.58579 | overlap 1820286 CGGCGAGACGCCCCT CGATGTCGCGCTC ACGGAA GGGCGCGACATCG GTTATCAGGGGTTCG TERM 1963 1820559 - 1820580 + G 78 -4.3 -4.72272 | opp_overlap 1820573, overlap 1820560 TTCAGGGCTCGCCCT TGCCGCTGT ATCA ACGGCCGCG TTTTTACTCGGACGA Bphy_1602 1820201 - 1821121 + | xylose isomerase domain-containing protein Bphy_1603 1821118 - 1821924 + | myo-inositol catabolism IolB domain-containing protein TERM 1964 1821934 - 1821979 + T 83 -5.9 -4.88217 | gap 1, overlap 1821934 1821936 1821937 AGTTAGGTTTTTTTG CCTGCGACGCC-AGTCGCCGGT ATT GCCTGCGGCGCGGCGTTGCCTG TTTTGGTTTTTTGCT TERM 1965 1822042 - 1822066 + T 72 -5.6 -4.41348 | GCTTCTGGTTGGCCA GTGTTGCCCC TGTGC GAGGCGGCAC TTTCTTTGCCGCGGC TERM 1966 1822626 - 1822594 - T 73 -3.2 -4.86731 | overlap 1822597 1822598 1822622 CCGCGGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACACTGGC CAACCAGAAGCAAAC Bphy_1604 1823560 - 1822847 - | ABC transporter related TERM 1967 1823249 - 1823267 + g 72 -8.8 -4.07885 | opp_overlap 1823223 CTTCACGTCGCGCGG CCTGGTGC CCA GCAGCAGG TTTTCGCGCACGCTG Bphy_1605 1824327 - 1823557 - | ABC transporter related Bphy_1606 1825583 - 1824324 - | inner-membrane translocator TERM 1968 1824747 - 1824726 - G 70 -2.1 -4.60487 | overlap 1824731 GACGACGCTGAAAAA CACCAGCAC CACG GCGCCCGCG ACCGGCCCGAAAAAC TERM 1969 1825001 - 1824955 - G 70 -13.7 -2.62184 | overlap 1824930 1824987 GCCGCGCGCACAGGA TTGTCGCGCACGGCATTCGCG AGCCG CATGAACGGCGTGCGCGACAG CGCGTACATCGCGAT TERM 1970 1825555 - 1825500 - G 80 -15.2 -3.14944 | gap 1 TAGCAGCACACCCAA CGCGGCCCACGGCAGCGCCGCCCGCCA TGT CGACACGTGGCGC-GCAGCGGGCAGCG TGGGGCGCACGTCGA Bphy_1607 1826526 - 1825576 - | inner-membrane translocator TERM 1971 1825635 - 1825606 - G 77 -12.1 -3.61398 | gap 1, opp_overlap 1825629 GCGCTGCCCGAAGAA GCCGCG-TGCACGC ACG GCGAGCATCGCGAC GAGCAGCAGATACGG TERM 1972 1825918 - 1825900 - G 71 -9.5 -3.75024 | TTCGACGACGAACAA GGGCGCG CCGAT CACGCCC GCGAGCGCGGCGAAC TERM 1973 1825988 - 1825965 - G 72 -13.2 -3.06671 | gap 1 AGACCCAGGTGAACA CGCTCGGCACA TCA TG-GCCGAGCG CTTCGACGGCTTGCG TERM 1974 1826373 - 1826354 - G 70 -7.8 -3.96327 | gap 1, overlap 1826355 AGTGCCCACCAGAAA CCCG-CGCG CGC CGCGACGGA AAAACCGACATACGC Bphy_1608 1826982 - 1826530 - | thioesterase superfamily protein Bphy_1609 1828160 - 1827012 - | alcohol dehydrogenase Bphy_1610 1829264 - 1828233 - | threonine aldolase Bphy_1611 1830695 - 1829466 - | hypothetical protein TERM 1975 1830862 - 1830846 - g 76 -9.3 -4.07568 | GGTCGTGCGCGAAAA CGGCGTG ACG CGCGCCG CCGCGAAGCTCAATC TERM 1976 1831563 - 1831616 + G 78 -4.3 -4.73388 | gap 1, opp_overlap 1831553 1831548, overlap 1831583 CGACATCGCCGTGCA TGCGCTCGACGATCTGGGCAGCATCG ATA CGCTGCTGATCTGG-CGGCGCGGGCA TTTTTCGTCAGCGTT Bphy_1612 1830799 - 1831704 + | LysR family transcriptional regulator TERM 1977 1831747 - 1831779 + T 74 -6.2 -4.42386 | opp_overlap 1831751, overlap 1831750 1831751 ATCGATATAAACAAA AAAAGCCGCAAGTC CTATC GACTCGCGGCCTTC TTTTATGCATAAGCG TERM 1978 1831750 - 1831776 + T 77 -7.9 -4.33182 | opp_overlap 1831751, overlap 1831747 1831751 GATATAAACAAAAAA AGCCGCAAGTC CTATC GACTCGCGGCC TTCTTTTATGCATAA TERM 1979 1831751 - 1831775 + T 71 -11.4 -3.19186 | opp_overlap 1831751, overlap 1831750 1831747 ATATAAACAAAAAAA GCCGCAAGTC CTATC GACTCGCGGC CTTCTTTTATGCATA TERM 1980 1831775 - 1831751 - T 100 -13.6 -6.04953 | opp_overlap 1831751 1831750 1831747 ATATAAACAAAAAAA GCCGCAAGTC CTATC GACTCGCGGC CTTCTTTTATGCATA Bphy_1613 1834461 - 1831837 - | alanyl-tRNA synthetase TERM 1981 1832762 - 1832705 - G 72 -13.3 -3.09516 | gap 1, opp_overlap 1832722 GCGTCGACGAGCGAA CCCTTCTGCTGCACATGGCCGCCGAGCA CTT CGCGCAGCG-CCTTGTGCATCAGGTGGG TGGCCGAGTGGTTAC Bphy_1614 1834768 - 1835988 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 1982 1836098 - 1836118 + T 78 -11.1 -3.64822 | opp_overlap 1836076 CGCGAGCGCGTCAGT CGCTCGTGT CGC GCACGGGCG TTTCGCTCACGCCAT Bphy_1615 1836676 - 1836125 - | hypothetical protein TERM 1983 1836718 - 1836706 - R 75 -10.5 -3.64822 | opp_overlap 1836707 ATGCGTTCATGGAAA GCGGC TGC GCCGC CAGCCCTATTGAATC Bphy_1616 1838502 - 1836724 - | gamma-glutamyltransferase TERM 1984 1838261 - 1838226 - G 73 -9.7 -3.91084 | gap 2, opp_overlap 1838246, overlap 1838227 CGAGCGTGAATGAAA CCGCGACGGCGGCATCG ACGG CATTGCCGCC--CGCGG CGAAGATCTGCTGCG TERM 1985 1838533 - 1838517 - H 100 -15.1 -3.96624 | TATCGGCACCAGAAA GCGCGCG CGG CGCGCGC AATGTCGGAAGGAAC Bphy_1617 1838855 - 1839544 + | Ser/Thr protein phosphatase family protein TERM 1986 1839612 - 1839588 - g 79 -6.4 -4.57474 | gap 1, opp_overlap 1839610, overlap 1839590 GCAATCGACAGAAAA CGGCG-GCG GCTCTTCA CGCTCGCCG CGCTGGGCGCAGTAT Bphy_1618 1839561 - 1839938 + | cytochrome c oxidase subunit II Bphy_1619 1840859 - 1839948 - | LysR family transcriptional regulator TERM 1987 1840702 - 1840668 - G 81 -12.1 -3.86346 | gap 1, opp_overlap 1840650 1840650 1840692 GCAGCGTTCGAGAAA CGCCGCGCCTTCTTCG CTCA CGACGA-GGCGCCGCG TCGAGCGGTACATCA TERM 1988 1840929 - 1840939 + H 87 -4 -5.46706 | opp_overlap 1840916, overlap 1840915 AGCCGCGCGGCGCGC GTAT TCC ATAC TTTTTGTTTTGAAAT Bphy_1620 1841045 - 1842820 + | glyoxylate carboligase TERM 1989 1842851 - 1842870 + F 73 -12.2 -3.15544 | opp_overlap 1842866 CTTCACCGGGATGGG TGCGCTTC GCAC GAAGCGCA TTCGTCCGCGTCACG Bphy_1621 1842930 - 1843730 + | hydroxypyruvate isomerase Bphy_1622 1843801 - 1844709 + | 2-hydroxy-3-oxopropionate reductase TERM 1990 1844749 - 1844715 - T 100 -15.7 -3.72576 | overlap 1844719 GGCTGCTTGACGAAA CGAACGCCGCCGTGA CGGGT TCACGGCGGCGCGCA GGTGGGGCGCCTGGT TERM 1991 1844745 - 1844719 - T 100 -19.5 -3.56704 | overlap 1844715 GCTTGACGAAACGAA CGCCGCCGTGA CGGGT TCACGGCGGCG CGCAGGTGGGGCGCC Bphy_1623 1846218 - 1844956 - | L-sorbosone dehydrogenase TERM 1992 1845207 - 1845195 - G 71 -7.7 -4.18018 | opp_overlap 1845194 1845195 GCTCGGCATCGAAAA TACCG CCC CGGTA CTTCTGCGGAAACAT TERM 1993 1845288 - 1845305 + g 72 -8.3 -3.98683 | opp_overlap 1845288 1845286 CGACGGCCGGAAACA CGACGCC CGCC GGCGGCG TTTCGTTCCTGTACT TERM 1994 1846478 - 1846424 - R 70 -4.8 -4.42806 | opp_overlap 1846430, overlap 1846432 1846436 CGATGTTGAAACAAA CGACAGGACGAATGCCTGCACTGCGC GAC GCGCGATACAGGCATCCGGGTCTTCA GGGAGACAGGAACAA TERM 1995 1846470 - 1846432 - R 100 -18.2 -2.76272 | opp_overlap 1846430, overlap 1846424 1846436 AAACAAACGACAGGA CGAATGCCTGCACTGCGC GAC GCGCGATACAGGCATCCG GGTCTTCAGGGAGAC TERM 1996 1846466 - 1846436 - R 82 -14 -3.26834 | opp_overlap 1846430, overlap 1846432 1846424 AAACGACAGGACGAA TGCCTGCACTGCGC GAC GCGCGATACAGGCA TCCGGGTCTTCAGGG Bphy_1624 1847615 - 1846548 - | L-asparaginase, type II TERM 1997 1847639 - 1847625 - R 87 -7.1 -4.87665 | opp_overlap 1847638, overlap 1847627 CGCCATCGATAAAAA CGCGA GCCTG TCGCG CGGCACGCGTTGACT Bphy_1625 1848591 - 1847665 - | LysR family transcriptional regulator TERM 1998 1848699 - 1848648 - R 70 -12.2 -2.71712 | gap 1, opp_overlap 1848656 1848656 1848659, overlap 1848647 TGCCTGGTTCGAAAT GC-GCACGGTGTGCGGCTCAATGTG CCG CTCATTGTGCCGCTCATTGTGCCGC TCAATGTGCCGGAAA TERM 1999 1848656 - 1848690 + r 79 -12.8 -3.31461 | opp_overlap 1848648 1848647, overlap 1848656 1848659 TCGAAATGCGCACGG TGTGCGGCTCAATGTG CCG CTCATTGTGCCGCTCA TTGTGCCGCTCAATG TERM 2000 1848659 - 1848687 + r 73 -13.1 -2.83271 | opp_overlap 1848648 1848647, overlap 1848656 1848656 AAATGCGCACGGTGT GCGGCTCAATGTG CCG CTCATTGTGCCGC TCATTGTGCCGCTCA Bphy_1626 1849758 - 1848700 - | sulfate ABC transporter, ATPase subunit Bphy_1627 1850778 - 1849774 - | sulfate ABC transporter, inner membrane subunit CysW Bphy_1628 1851671 - 1850775 - | sulfate ABC transporter, inner membrane subunit CysT TERM 2001 1851738 - 1851721 - R 88 -14.1 -3.56643 | opp_overlap 1851720 GGCACATTGCCGAAA GCGCGCC CGAG GGCGCGC CTTGCTCAAACTTCG Bphy_1629 1852810 - 1851767 - | sulfate ABC transporter, periplasmic sulfate-binding protein Bphy_1630 1853111 - 1853761 + | LexA family transcriptional regulator Bphy_1631 1853789 - 1854133 + | hypothetical protein TERM 2002 1854144 - 1854121 - f 81 -13.2 -3.53444 | gap 1, opp_overlap 1854119 1854127 CGACCGGTTGGCAAA GCAAGC-GGCG TAA CGCCTGCTTGC AATCTTCGCGGGATC TERM 2003 1854696 - 1854667 - g 90 -15.7 -3.75153 | gap 1, overlap 1854668 CGCCGGGAATGTAAA GCCCGCGCCTGTGC CCG GCTCAGGCGCG-GC GAACGCCAACGGCAC TERM 2004 1854696 - 1854668 - g 80 -15.9 -2.84878 | overlap 1854667 GCCGGGAATGTAAAG CCCGCGCCTGTGC CCG GCTCAGGCGCGGC GAACGCCAACGGCAC Bphy_1632 1854218 - 1854871 + | putative transmembrane protein Bphy_1633 1855363 - 1854899 - | UspA domain-containing protein TERM 2005 1855377 - 1855391 + H 71 -11.4 -3.25919 | overlap 1855381 ATGTCCTTACCCTCC CCGCGA CCA TCGCGG TCTTACTTGCATCAT Bphy_1634 1855625 - 1856539 + | nodulation ABC transporter NodI Bphy_1635 1856583 - 1857410 + | ABC transporter TERM 2006 1857401 - 1857459 + T 70 -12.3 -2.76671 | gap 1, overlap 1857393 1857401 GCTTCGCCGGCGCAT GATGCGC-TAAGGGCGCCGCAGCGCAGT CTGT GCTGCACGGCGGCGCCCTCGGGCAGATC CTTTCAGATCACTCT Bphy_1636 1857890 - 1857468 - | hypothetical protein Bphy_1637 1859201 - 1858137 - | permease TERM 2007 1859136 - 1859120 - G 73 -5.7 -4.42653 | ATTTGACGTAGAAAA GCCCGGC GAC GGCGAGC AGCACGAAAATCGGC TERM 2008 1859344 - 1859316 - R 86 -5.9 -5.09225 | opp_overlap 1859316 1859329 ATGGTATCGAAAAAA GCGGGGCCGAA GCGCGCG TTCTGCCCGGC TTGATGGCGAGCGCG TERM 2009 1859427 - 1859452 + r 87 -16.1 -2.87683 | GCGTTCTGTGGGTGT CGGCGTACCGC CGTC GCGGCACGCCG TGTCTGGCAGCGTGT Bphy_1638 1860532 - 1859480 - | aldo/keto reductase TERM 2010 1859768 - 1859786 + g 71 -13.8 -2.70932 | opp_overlap 1859749 GATGCGCGCGCCTGC CGGGCGCG CCC CGCGCTCG TACTTGCCCGAGAGC TERM 2011 1860216 - 1860239 + g 70 -11.6 -3.31144 | CGGTCGAACTGGTTG CCCTCGCCGC GAAT GTGGCGCGGG TTGTGCGGCTGACGC TERM 2012 1860747 - 1860778 + G 75 -3.6 -4.72272 | gap 1 CGTCGAACGGACGGC CGTCGCTGATCGTGA CGC TCGTGGCC-GCGGCG TTTTTCATGGAGAAC TERM 2013 1861177 - 1861189 + G 75 -10.5 -3.86524 | overlap 1861175 ACCCGTCATCGGACC GCCGC TCG GCGGC TTTATCACGACGTAT Bphy_1639 1860695 - 1862137 + | EmrB/QacA family drug resistance transporter Bphy_1640 1862178 - 1862390 + | putative cytoplasmic protein TERM 2014 1862493 - 1862468 - T 100 -14.1 -5.08255 | opp_overlap 1862468 AGTGCCAAAACAAAA CGGCATTGCGA TTGC TCACAATGCCG TTGCTGGAAATATCT TERM 2015 1862468 - 1862493 + T 73 -11.9 -3.1637 | opp_overlap 1862468 AGTGCCAAAACAAAA CGGCATTGCGA TTGC TCACAATGCCG TTGCTGGAAATATCT Bphy_1641 1863686 - 1862685 - | YjbN family TIM-barrel protein TERM 2016 1863859 - 1863883 + H 77 -12.1 -3.61652 | overlap 1863855 1863860 AGGGCGCGTACACGG TGAACGCCCGC CCG GCGGGCCTTCG TTGATTGTTTCCGAA TERM 2017 1863860 - 1863882 + H 76 -13.4 -2.76509 | overlap 1863859 1863855 GGGCGCGTACACGGT GAACGCCCGC CCG GCGGGCCTTC GTTGATTGTTTCCGA Bphy_1642 1864039 - 1864305 + | hypothetical protein TERM 2018 1864642 - 1864669 + T 100 -17.8 -4.67607 | TGCAGGTGTCGTGCA GCCGGATGTTCC CCAC GGAGCATCCGGC TTTATTTCTTCGGCG TERM 2019 1864713 - 1864699 - T 81 -3.5 -5.18371 | GTCGATAAAATAAAA CGGCT TGCTT AACCG CCCGCCGCCAGCAGT Bphy_1643 1864958 - 1864707 - | hypothetical protein Bphy_1644 1865243 - 1865043 - | hypothetical protein Bphy_1645 1865469 - 1865744 + | hypothetical protein Bphy_1646 1866026 - 1865811 - | TOBE domain-containing protein Bphy_1647 1867077 - 1866085 - | ABC transporter related TERM 2020 1866658 - 1866687 + g 91 -10.7 -4.62471 | gap 1 CTGAAACATGATCCG CGTGTCGAACGGCT GCG AGCCGTCCG-CGCG TTTTTCCAGCTTGCC Bphy_1648 1867925 - 1867074 - | binding-protein-dependent transport systems inner membrane component Bphy_1649 1869133 - 1867976 - | alkanesulfonate monooxygenase Bphy_1650 1869179 - 1869433 + | hypothetical protein TERM 2021 1869554 - 1869569 + F 85 -3.3 -5.47399 | GTCTATGGACCGCGC TCGTT GTTTTG AACGA TTTTTTTGAGCTTAG TERM 2022 1869649 - 1869633 - f 74 -7.9 -4.10657 | overlap 1869623 GCATACGTCGCAAAA GCGCACG GGA CGCACGC CAGCGCACCAGAAGC Bphy_1651 1869754 - 1870173 + | putative transmembrane protein Bphy_1652 1871375 - 1870245 - | enoyl-CoA hydratase/isomerase TERM 2023 1870720 - 1870771 + g 74 -15.1 -2.56596 | overlap 1870717 ACGCACGCCACCACT TCCGCGCCCTGCTCGAACGTCTG CGACTT CAGGCGATCGATCAGCGCGGGGA TGACTTCGTCGGGCA TERM 2024 1871486 - 1871449 - R 100 -18.6 -4.25283 | gap 2, opp_overlap 1871467 1871472 1871482 ACTTGTTCAGTAAAA CCGGC-AGCGCAACG-GG TGGC CCGCGTTGCGCTCGCCGG CCTCGCCGGCTATTG TERM 2025 1871472 - 1871508 + r 81 -11.6 -3.90298 | gap 2, opp_overlap 1871449, overlap 1871467 1871482 GCAACGGGTGGCCCG CGTTGCGC--TCGCCGGC CTC GCCGGCTATTGCGCAGCG TTGTCTTTCGTTGAA TERM 2026 1871482 - 1871496 + r 76 -12.8 -3.02461 | opp_overlap 1871449, overlap 1871472 1871467 GCCCGCGTTGCGCTC GCCGGC CTC GCCGGC TATTGCGCAGCGTTG Bphy_1653 1872242 - 1871496 - | TetR family transcriptional regulator TERM 2027 1872313 - 1872285 - H 88 -11.1 -4.13183 | opp_overlap 1872281 1872285 AAAAGTCAAATTAAA CTGAACATCGTTC ATT GAACAGTGTTCAG TAAATTTCTTGTGCT Bphy_1654 1872370 - 1873350 + | NAD-dependent epimerase/dehydratase Bphy_1655 1873681 - 1873394 - | hypothetical protein TERM 2028 1873762 - 1873776 + r 75 -8.5 -4.00038 | GACAGGCGGCCGACG GCCCG ATCGG CGGGC TTTATGGTACTCGTA TERM 2029 1873924 - 1873952 + r 77 -12.4 -3.57144 | gap 1 TCATGCGCCGTCCAG CAGCCGGTCCACG TACG CGCGG-CCGGCTG TTTCGACATGGACGA Bphy_1656 1874184 - 1873909 - | hypothetical protein TERM 2030 1874113 - 1874141 + g 78 -15.9 -2.66316 | opp_overlap 1874128, overlap 1874111 GCGCAGCGTCTGCTC GTGCGCCGGCACG AAC CGCGCCGACGCAC TGATGTAATAGCCCC Bphy_1657 1874346 - 1874579 + | hypothetical protein Bphy_1658 1874716 - 1875069 + | hypothetical protein Bphy_1659 1875435 - 1875097 - | small multidrug resistance protein Bphy_1660 1875936 - 1875439 - | hypothetical protein TERM 2031 1876312 - 1876342 + H 86 -11.9 -4.07568 | opp_overlap 1876319, overlap 1876319 AAAGTGCCGTCACAC CATGAAACCCGCC CCAAT GGCGGGTTTTTTG TTTTGGAACGCGGCC TERM 2032 1876335 - 1876319 - H 77 -10.8 -3.81951 | opp_overlap 1876312 1876319 CGTCACACCATGAAA CCCGCC CCAAT GGCGGG TTTTTTGTTTTGGAA TERM 2033 1876319 - 1876335 + H 100 -10.8 -5.79595 | opp_overlap 1876319, overlap 1876312 CGTCACACCATGAAA CCCGCC CCAAT GGCGGG TTTTTTGTTTTGGAA Bphy_1661 1876447 - 1876992 + | NUDIX hydrolase Bphy_1662 1877009 - 1877746 + | leucyltransferase Bphy_1663 1877917 - 1878756 + | arginyltransferase TERM 2034 1878819 - 1878835 + F 93 -8.7 -4.77757 | TCGCCGCGCTGCCGA CCCGTTA AAA TAGCGGG TTTTCATTTTTCAGC Bphy_1664 1878867 - 1879901 + | dihydroorotate oxidase Bphy_1665 1880658 - 1879954 - | signal peptidase I TERM 2035 1880111 - 1880081 - G 75 -6.9 -4.41348 | gap 1, opp_overlap 1880089, overlap 1880087 GCGCGTGGAAAGAAA CCGA-AATAGCGCG AATC CGCGCTATCGTCGC GATTGTCGCCGAGCA TERM 2036 1880104 - 1880087 - G 81 -11.3 -3.96542 | opp_overlap 1880089, overlap 1880081 GGAAAGAAACCGAAA TAGCGCG AATC CGCGCTA TCGTCGCGATTGTCG Bphy_1666 1881800 - 1880796 - | oxidoreductase domain-containing protein Bphy_1667 1882669 - 1881923 - | GntR domain-containing protein TERM 2037 1882562 - 1882589 + g 72 -3.3 -4.63932 | gap 1, opp_overlap 1882562 1882561, overlap 1882566 1882568 TTCCTTCGACAATAC GTCCTGCGGCGG CAAGA CCGC-GCCGTAC TTTTCTTCGACGATC TERM 2038 1882598 - 1882648 + g 72 -7 -4.329 | gap 3, overlap 1882600 GCCGTACTTTTCTTC GA-CGATCCC-GGTCA-CGAGGCCA TCCA TGACCTTGCTGACCAGGGACCGCTC TTTGTTGGTGTGTTC TERM 2039 1883788 - 1883753 - g 74 -11.1 -3.65084 | overlap 1883745 AATCAAATCGCGAAA CAGCCGAAACCGCAC TTCACC GCGCGTTCCCGGCTG TGGCACGCCTGAATA Bphy_1668 1883210 - 1883800 + | hypothetical protein TERM 2040 1884181 - 1884159 - f 71 -7.6 -4.07746 | overlap 1884162 GGGTTAAAAAGACAA GAGGTCGTGC CGG GCACGGCTTC ACGCGAGGACCGATC Bphy_1669 1884197 - 1884931 + | Crp/FNR family transcriptional regulator Bphy_1670 1884937 - 1885236 + | hypothetical protein TERM 2041 1885726 - 1885708 - g 76 -6 -4.54323 | AAGCACAACAACAAA CAGTTTTC TTC GAAAGCTG GGCGCGCAAAGAGGC Bphy_1671 1885242 - 1885952 + | 4'-phosphopantetheinyl transferase TERM 2042 1888502 - 1888528 + G 79 -2.1 -5.06451 | opp_overlap 1888490, overlap 1888504 GCACGGCCGATACTC GAGGACGTCGA CCGCT TCGACGCCGGC TTTTTTGGCGTGATG TERM 2043 1888990 - 1888973 - g 84 -12.7 -3.72324 | opp_overlap 1888989 TATCTCTACGAAGAA GGCGGCA TGGG TGCCGCC GACGGCGTGTGCCGT TERM 2044 1896377 - 1896343 - g 80 -12.2 -3.75105 | gap 1 TCAACTCATGAAGAA CGT-GACGGTCGCCG AACTGG CGGCGACCCTCGACG GCACGCAGGAGAACG Bphy_1672 1886459 - 1896466 + | amino acid adenylation domain-containing protein TERM 2045 1896824 - 1896793 - g 75 -7.8 -4.25104 | gap 1, opp_overlap 1896809 GGGCTTCGAGGAAAA GGCCG-CCCTTGCGG AGG CCGAGCGGGTCGGCC GGCTACAGGCCAGCA Bphy_1673 1896470 - 1898800 + | condensation domain-containing protein Bphy_1674 1898820 - 1899974 + | hypothetical protein TERM 2046 1900858 - 1900887 + G 83 -15.1 -3.26471 | gap 1 CGCCCGCATCCGAGG TGGGCGCGTTCGGC GTG GCCGAACG-GCTCA TTGCTGTCGCGCTCA TERM 2047 1901087 - 1901115 + G 88 -11.1 -4.32436 | CGTGATGGGTAACGG CTTTCAGCACG CCGTCAC CGTGCTGAAGG TTTTCGTGCTGGTCT Bphy_1675 1900125 - 1901417 + | polysaccharide biosynthesis protein Bphy_1676 1903196 - 1902093 - | acyltransferase 3 TERM 2048 1902277 - 1902258 - G 82 -6.4 -4.62302 | GAATAGGGCGAAAAA CAGCGC GACACGCA GCGCTG GCCCCACCGACAGAT Bphy_1677 1904354 - 1903257 - | glycosyl transferase group 1 TERM 2049 1903549 - 1903527 - G 72 -8.4 -4.05788 | overlap 1903548 CGGCGGCAAACCAAA CCCTTCCGTC AGG GATGGAAAGG CAAGTGCGCCGGCGT Bphy_1678 1905485 - 1904544 - | glycosyl transferase family protein TERM 2050 1905181 - 1905160 - G 71 -4.4 -4.4767 | overlap 1905161 1905174 TCATGCATCAGAAAA TCGTCGTC CAGAAT GATGACGA CGTCGAAGTCATCCG Bphy_1679 1907129 - 1905729 - | hypothetical protein Bphy_1680 1908406 - 1907189 - | glycosyl transferase group 1 TERM 2051 1907692 - 1907643 - G 72 -11.3 -3.53012 | gap 1 TTGGCGCGCGCGAAA TCCGTCCCGTCGCCGATCACGACG AGG CGCCGCGA-CGGCATCGCGGCGAA GGCCTCGACGATCAG TERM 2052 1907825 - 1907809 - G 71 -13.7 -2.69151 | overlap 1907806 CGGGCGGATAGACGA CGGCAGC GTC GCTGCCG TAAGCCTTGCGGATG Bphy_1681 1909494 - 1908394 - | glycosyl transferase group 1 Bphy_1682 1910769 - 1909783 - | transcription factor jumonji domain-containing protein Bphy_1683 1912024 - 1910951 - | acyltransferase 3 Bphy_1684 1914234 - 1912363 - | FkbH like protein TERM 2053 1914062 - 1914017 - G 81 -15.5 -3.01712 | opp_overlap 1914014 1914017 1914055, overlap 1914027 1914029 TCTGTCGGGGCAACA TCCGGCACAAGATCATGGTAT TTCG ACCCCATGAGCATGTGCCGGA TGCTGTGTCCGCAAT TERM 2054 1914299 - 1914256 - H 72 -5.3 -4.48987 | gap 2, overlap 1914250 1914275 1914277 CCCTCAGAATGAAAA CGTTCCACATCGCGAAGGACA CCTG TGCGCCTCGCGA-G-GGCACG GGTGGGCGCGCACGG Bphy_1685 1914833 - 1915915 + | glycosyl transferase family protein TERM 2055 1917055 - 1917071 + G 75 -4.3 -4.65838 | AGTCGGAGCGGTCGT GGGAACC TTC GGTCTCC TTTTTGGCGTCTATA Bphy_1686 1916390 - 1918156 + | hypothetical protein Bphy_1687 1919608 - 1918217 - | putative calcium binding protein TERM 2056 1920314 - 1920344 + G 86 -6.8 -4.89009 | overlap 1920317 GTTCAACTCGACGAC CGCCGACTTCGGCA ATC TGCTGAAATCGCTG TTTTTCATTCCCTAT Bphy_1688 1920030 - 1921133 + | acyltransferase 3 Bphy_1689 1923914 - 1921680 - | exopolysaccharide transport protein family Bphy_1690 1925260 - 1923974 - | polysaccharide export protein TERM 2057 1925224 - 1925204 - G 89 -18.3 -3.17051 | overlap 1925202 TCGCCACCACGAAGA CAGGCGCGC AGC GCGCGCCTG AGTCCTCCACTGCTC Bphy_1691 1926595 - 1925465 - | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TERM 2058 1926322 - 1926273 - G 72 -8.6 -4.14397 | gap 2, overlap 1926268 ATTGCATAAAGCAAA GCCAGCC-CGCAG-AGTTGCACGG CGAG CCATGCAAATGCCGTGCGGCCGGC GACGCTCGCGACGGG Bphy_1692 1927103 - 1926576 - | hypothetical protein TERM 2059 1927287 - 1927275 - R 86 -6.2 -4.93877 | opp_overlap 1927280, overlap 1927276 TTGGAGGAAAGAAAA GCGG AGCAG CCGC GCAGACCGTGCTGGC Bphy_1693 1928090 - 1927395 - | ribose 5-phosphate isomerase TERM 2060 1927717 - 1927765 + g 78 -7.4 -4.37886 | gap 1, overlap 1927720 1927720 AGCACGTCGACGACC TTGCTCGCGTCGGCGATGCAGAG GAAT TTCTCCGCCACCGACGCGA-CGA TTTTCTCGCGCGTGA TERM 2061 1927902 - 1927949 + g 79 -11.1 -3.85698 | gap 1, opp_overlap 1927944 1927945 ACCGTGCGATTGCAG GCGCGCCGTCGTCGCGACCGAG CTGGA CACGG-CGCCGCGAAAGCGCGC TTTGTGCGCGGCGAG Bphy_1694 1929078 - 1928206 - | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD TERM 2062 1928446 - 1928460 + g 81 -11.4 -4.0031 | GGCGGGCGCATGCGG CTCGCG GCC CGCGAG TTCTTTCGTGACGGT Bphy_1695 1929652 - 1930713 + | acyltransferase 3 Bphy_1696 1931595 - 1930852 - | RNA methyltransferase TERM 2063 1931656 - 1931619 - R 93 -17.7 -3.3482 | CAACCTTTGAATGAA CACGCCGCGATCGTATC GACT GGTCCGATCGCGGCGCG CCCGATGAGAATGAG Bphy_1697 1934182 - 1931729 - | ribonuclease R TERM 2064 1931798 - 1931812 + g 77 -12.8 -3.33696 | overlap 1931792 CGACACCGCCGCCTT GCGCGC CGC GCGCGC TTCCTTCACGGCCGC TERM 2065 1932158 - 1932148 - G 74 -2.4 -4.82901 | GCCCTTCGATAAAAA GCGC GTC GAGC TGCACGAAGATGCCG TERM 2066 1934670 - 1934683 + H 100 -9.5 -4.94972 | opp_overlap 1934669 1934670 AGATTCAAATGAAAG CCGCC TTCG GGCGG TTTTTCGTTGTAGTG TERM 2067 1934945 - 1934927 - H 100 -10.2 -5.00616 | opp_overlap 1934927 CGTCTTTTTAAAAAA GGTCGGCA TTT TGCCGGCC TTTTTTCATTTCTGG TERM 2068 1934927 - 1934945 + H 100 -12.4 -5.42514 | opp_overlap 1934927 CGTCTTTTTAAAAAA GGTCGGCA TTT TGCCGGCC TTTTTTCATTTCTGG TERM 2069 1935026 - 1935005 - H 90 -15.9 -3.54424 | opp_overlap 1934998 1935025 CGTGAGGGCTCGAAA GGCTGCGCT TGCA AGCGCAGCC GGGTCGCGTTGCGTG TERM 2070 1935489 - 1935501 + G 72 -3.4 -4.59944 | ATTTGGGCTGGACAC TCGA CGCAT TCGA TTTCTTTCTGATGGT Bphy_1698 1935431 - 1936654 + | major facilitator transporter TERM 2071 1936681 - 1936708 + F 95 -11.2 -4.8048 | opp_overlap 1936681 GCTGCCGTAGAAAAA GGCTGCTGCCGT TCAT GCGGAAGCGGCC TTTTTCGTGTCCGCC TERM 2072 1936708 - 1936681 - f 87 -8.3 -4.82901 | opp_overlap 1936681 GCTGCCGTAGAAAAA GGCTGCTGCCG TTCATG CGGAAGCGGCC TTTTTCGTGTCCGCC TERM 2073 1937334 - 1937344 + G 77 -4.6 -4.68424 | overlap 1937328 CGCACTATGCGTCCG TCGC CGA GCGG TTTTTCGATGCGTTC TERM 2074 1937421 - 1937438 + G 71 -10.5 -3.56092 | TGCACTTCGCGATCG GCGCGCT GTCG GGCGCGC TTTCGGGCATGCTGG Bphy_1699 1936907 - 1937779 + | TetR family transcriptional regulator Bphy_1700 1937875 - 1940544 + | hypothetical protein TERM 2075 1940708 - 1940739 + G 75 -12.2 -3.53012 | gap 1, overlap 1940710 AACTTCGTCAATTCG CCG-CTGGGCGCGCG GCT CGCGCGCTCGCTCGG TTTGCCGAAGCCCGA TERM 2076 1940710 - 1940735 + G 74 -14.7 -2.64155 | gap 1, overlap 1940708 CTTCGTCAATTCGCC GCTGGGCGCGCG GCT CGCGCGCTC-GC TCGGTTTGCCGAAGC Bphy_1701 1940675 - 1942090 + | short-chain dehydrogenase/reductase SDR Bphy_1702 1942095 - 1943012 + | dehydratase TERM 2077 1944315 - 1944339 + G 75 -12.1 -3.53012 | opp_overlap 1944306, overlap 1944338 AATCAACGTGAACGG CGGATCGCTCG CGA CGGGCCATCCG TTTGCCGCGACGGGC Bphy_1703 1943152 - 1944480 + | acetyl-CoA acetyltransferase Bphy_1704 1944579 - 1946378 + | AMP-dependent synthetase and ligase Bphy_1705 1946804 - 1946412 - | hypothetical protein TERM 2078 1946536 - 1946515 - G 75 -8 -4.2704 | gap 1 GCGAGCACGAAGAAA TCGGCGGCG CGCGT CGC-GCCGA TCAGCGTCAGACGCC Bphy_1706 1948404 - 1946824 - | FAD linked oxidase domain-containing protein TERM 2079 1948299 - 1948334 + g 80 -14 -3.33696 | gap 1 CATACGGTGCGAGAC TCGTCGGCGACGCCGCG ACC TGCG-TGGCGCCGACGA TTGCTTCGAAGGCGG Bphy_1707 1948942 - 1948496 - | putative lipoprotein Bphy_1708 1949987 - 1949193 - | putative transmembrane anti-sigma factor Bphy_1709 1950516 - 1949998 - | ECF subfamily RNA polymerase sigma-24 factor TERM 2080 1950223 - 1950204 - G 81 -7.8 -4.56978 | gap 1 CGGGCAAACAATAAA GCGCG-CGC TGG ACGTCGCGC AACACCAGGCCGTCG Bphy_1710 1950810 - 1950550 - | hypothetical protein Bphy_1711 1951214 - 1951666 + | RNA chaperone Hfq Bphy_1712 1951966 - 1951727 - | hypothetical protein Bphy_1713 1952127 - 1952393 + | hypothetical protein Bphy_1714 1952390 - 1952641 + | hypothetical protein Bphy_1715 1953361 - 1952690 - | putative signal peptide protein Bphy_1716 1953889 - 1954374 + | putative signal peptide protein TERM 2081 1954471 - 1954441 - T 100 -11.8 -5.08824 | opp_overlap 1954441 GCCTGACGTAAAAAA GCCGGCCTGGCA GTCACTT CGCGAGGCCGGC TTTTTATTTTCATTA TERM 2082 1954441 - 1954471 + T 100 -11.1 -5.54338 | opp_overlap 1954441 GCCTGACGTAAAAAA GCCGGCCTGGC AGTCACTTC GCGAGGCCGGC TTTTTATTTTCATTA Bphy_1717 1954966 - 1954514 - | putative transposase protein Bphy_1718 1956221 - 1955124 - | AFG1 family ATPase TERM 2083 1956237 - 1956276 + r 86 -15.7 -2.74563 | opp_overlap 1956241 1956244, overlap 1956244 TTCGTGAGGCAGCAA TGAAGAAGGCGGGAGGG ATTCAA CCCACCCGCCTTCGTCG TGATTCGCGTGTGCC TERM 2084 1956272 - 1956241 - R 93 -17.3 -3.40867 | opp_overlap 1956237 1956244, overlap 1956244 TGAGGCAGCAATGAA GAAGGCGGGAGGG ATTCAA CCCACCCGCCTTC GTCGTGATTCGCGTG TERM 2085 1956269 - 1956244 - R 87 -13.2 -3.83844 | opp_overlap 1956237 1956244, overlap 1956241 GGCAGCAATGAAGAA GGCGGGAGGG ATTCAA CCCACCCGCC TTCGTCGTGATTCGC TERM 2086 1956244 - 1956269 + r 79 -13.2 -3.25015 | opp_overlap 1956244 1956241, overlap 1956237 GGCAGCAATGAAGAA GGCGGGAGGG ATTCAA CCCACCCGCC TTCGTCGTGATTCGC Bphy_1719 1957748 - 1956318 - | dihydrolipoamide dehydrogenase TERM 2087 1957795 - 1957772 - R 84 -16 -2.52464 | gap 1, opp_overlap 1957772 TTTTTGGCTAACCGA CGCG-GCCGCG CTT CGCGGCGCGCG TGGCTTCAGATACTG TERM 2088 1957772 - 1957795 + r 84 -16 -2.54193 | gap 1, opp_overlap 1957772 TTTTTGGCTAACCGA CGCG-GCCGCG CTT CGCGGCGCGCG TGGCTTCAGATACTG Bphy_1720 1959158 - 1957887 - | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase TERM 2089 1958421 - 1958397 - G 71 -9.3 -3.71848 | opp_overlap 1958397 1958398, overlap 1958398 1958400 CGCCTTCACGAAGAA CGACATGAAGC CAA GCTTCACGCCA TGTTCCTTCTCGAAC TERM 2090 1958472 - 1958508 + g 71 -10.1 -3.56704 | overlap 1958463 1958468 CAGATCCATGACGGG CGCCATGTTCACTTCGT TGA ACGTCGTGAGGATGGCG TTGGTTTGCTGCGAC TERM 2091 1959255 - 1959291 + r 89 -16.6 -3.08778 | opp_overlap 1959268, overlap 1959247 1959260 ATGGGAGATTCAGAC GCGGGGCGGGAAAGCG CACAA CGCTTTCCCGGTTCGC TCTCTGTGGTTATTT TERM 2092 1959260 - 1959286 + r 75 -12.3 -3.18065 | opp_overlap 1959268, overlap 1959255 1959247 AGATTCAGACGCGGG GCGGGAAAGCG CACAA CGCTTTCCCGG TTCGCTCTCTGTGGT Bphy_1721 1962156 - 1959301 - | 2-oxoglutarate dehydrogenase, E1 subunit TERM 2093 1962351 - 1962337 - R 78 -11.4 -3.66178 | opp_overlap 1962337 1962336 1962326 GCCCCCAACCGGAAA CCCCGT GCT ACGGGG CTTTGCGGCAAGTTT TERM 2094 1962504 - 1962452 - R 100 -11.4 -5.68039 | gap 1, opp_overlap 1962471, overlap 1962453 1962457 1962471 AAACGCACAAAAAAA CGCAAGCGCCATGCAAAAAGCCGCC CGAG GGCGGCTTTTTGC-TGAGACTTCTG ACGATAGTCTGGAAG TERM 2095 1962502 - 1962453 - R 86 -12.4 -3.98383 | gap 2, opp_overlap 1962471, overlap 1962452 1962457 1962471 AACGCACAAAAAAAC GCAAGCGCCATGCAAAAAGCCGCC CGAG GGCGGCTTTTTGC-TGAGACTT-C TGACGATAGTCTGGA TERM 2096 1962499 - 1962457 - R 88 -14.3 -3.60657 | gap 1, opp_overlap 1962471, overlap 1962453 1962452 1962471 CACAAAAAAACGCAA GCGCCATGCAAAAAGCCGCC CGAG GGCGGCTTTTTGC-TGAGAC TTCTGACGATAGTCT TERM 2097 1962471 - 1962486 + r 100 -11.8 -4.73388 | opp_overlap 1962457 1962453 1962452 1962471 AGCGCCATGCAAAAA GCCGCC CGAG GGCGGC TTTTTGCTGAGACTT TERM 2098 1962486 - 1962471 - R 100 -11.8 -4.66163 | opp_overlap 1962471, overlap 1962457 1962453 1962452 AGCGCCATGCAAAAA GCCGCC CGAG GGCGGC TTTTTGCTGAGACTT Bphy_1722 1964358 - 1962532 - | GTP-binding protein TypA TERM 2099 1964893 - 1964857 - g 76 -9.5 -4.13767 | gap 2 GTCGCCAGCGGAAAA TGCC-TGCTCGCG-GCC GAACT GGCGCGCGAGTACGGCA TCGACGCCAGCGCGG Bphy_1723 1964674 - 1965189 + | MarR family transcriptional regulator TERM 2100 1965777 - 1965759 - g 75 -3.1 -4.72272 | gap 1, overlap 1965761 GTGTCGCAGGAAAAA GC-TGCCG AAGC CGACATGC AGCAGGCCCGCGTGA Bphy_1724 1965222 - 1966769 + | RND efflux system outer membrane lipoprotein TERM 2101 1967358 - 1967322 - g 70 -5.7 -4.24342 | overlap 1967323 1967349 TCTCGCAGGAAGAAA TCTCCCACGCTCGCGAC GCC GTCAAGAGCGCGCAAGC CGCGCTCGACGCTGC Bphy_1725 1966850 - 1968070 + | efflux pump membrane protein Bphy_1726 1968109 - 1969674 + | EmrB/QacA family drug resistance transporter TERM 2102 1969922 - 1969964 + T 71 -11.3 -3.21099 | gap 2, opp_overlap 1969922 1969923, overlap 1969923 1969927 1969930 GCGCCGACGAGACAA TGCGACAGCCTGCACCCGGTT TGC ACCCGGG-GC-GGCTGTTGCC TTCCTCGTGAGACGG TERM 2103 1969923 - 1969963 + T 78 -14.8 -2.52516 | gap 2, opp_overlap 1969922 1969923, overlap 1969922 1969927 1969930 CGCCGACGAGACAAT GCGACAGCCTGCACCCGGTT TGC ACCCGGG-GC-GGCTGTTGC CTTCCTCGTGAGACG TERM 2104 1969963 - 1969923 - T 73 -12.6 -2.72471 | gap 2, opp_overlap 1969923 1969922 1969927 1969930, overlap 1969922 CGCCGACGAGACAAT GCGACAGCCTGCACCCGGTT TGC ACCCGGG-GC-GGCTGTTGC CTTCCTCGTGAGACG TERM 2105 1970171 - 1970113 - T 78 -2.9 -5.14563 | gap 1, opp_overlap 1970150, overlap 1970114 1970162 TGCCGGAGCAAAAAA CCGCCCGCCCAGGCGCTAGCTCACGA TGAGACGC TCGGGCGCCAGCACACCGTC-GGCGG CTTTCGCGACGCCAA Bphy_1727 1971057 - 1970128 - | tRNA pseudouridine synthase B Bphy_1728 1971512 - 1971081 - | ribosome-binding factor A TERM 2106 1971604 - 1971570 - R 100 -15 -5.01422 | gap 1, opp_overlap 1971570 CGATACAAAAACAAA GGGGCGGAACCGGGC TTCAGC GCCCG-CCCCGCCCC TCATGTGCACGACGC Bphy_1729 1974522 - 1971625 - | translation initiation factor IF-2 TERM 2107 1973554 - 1973611 + g 87 -15.3 -3.61398 | gap 1 CTTCTTCTTGTCGCC GCCGGGACCCGCTGGCTGCGTCGTCGCC GCC GGTTGCGCCGCTGCT-GCGGGCGCCGGC TTCTTCGCGGCCGGA TERM 2108 1973762 - 1973810 + g 91 -15.2 -3.84648 | gap 1 GGCGTGTTCATCATC TCGCGGATCGCGCGTGCCTCGGC TTCC GCCTTGGCGCG-GCGCTTCGCGA TTTCCTCCTGTTCGA TERM 2109 1973952 - 1973989 + g 77 -12 -3.63569 | gap 1, overlap 1973949 1973984 GCTCGGCCTGCTCGC GCGCCGCCGCGGCTG CTTCGGCCA CAGCCGCTGCG-CGC TTCTTAGCCGCTTCC TERM 2110 1974445 - 1974479 + g 70 -5.8 -4.3208 | gap 2, overlap 1974446 TTTCTGGACGCCCGC CGCCTGCAG-C-TGCT CGAGC AGCACGCCTGCAGGCA TTTTCAGTTCTGCGG Bphy_1730 1976094 - 1974619 - | NusA antitermination factor TERM 2111 1975153 - 1975183 + g 77 -4.7 -4.71426 | gap 1 AGCGACGGCCAGTTC GCTTTCG-TCGACG ACGA CGTCCATCGAATGC TTTTCTTCATCGACG Bphy_1731 1976549 - 1976091 - | hypothetical protein TERM 2112 1976688 - 1976674 - R 100 -11.4 -6.07627 | opp_overlap 1976674 1976671 1976669 AGCGGCAAAAAAAAA TGGGCG AAA CGCCCA TCATCTTATTGCCGG TERM 2113 1976845 - 1976881 + r 73 -12.3 -3.05816 | opp_overlap 1976832 1976844, overlap 1976832 1976831 AAGGCTTGAAACAGG CCATTTCGTGCAGTCTG GCG CAGTCTGCGAGAGATGG TTCGCTGGCGGATGC TERM 2114 1976933 - 1976961 + r 83 -14.5 -3.15544 | GCGATGCAGTCGAAC TCGGCGGCGGC TACGGGC GCCGCCGCCGC TTCGTGACGATCAGC Bphy_1732 1978765 - 1976972 - | pseudouridine synthase TERM 2115 1977180 - 1977209 + g 77 -12.7 -3.36273 | ACATCGCGGCCACCC CGGCCGCCACGGC CTTC GCCGCGGTTGCCG TTCGTATTGCCGAAG Bphy_1733 1979908 - 1978826 - | segregation and condensation protein B TERM 2116 1980214 - 1980178 - R 73 -11.4 -3.41602 | gap 1, opp_overlap 1980169 1980185 1980190, overlap 1980181 TCGAGCCCAGCATAA CGACCCGGCGCGCCGCG GGTT CG-GGCGCGCCTGGACC TGCGCTAGCTTTGCC TERM 2117 1980211 - 1980181 - R 87 -16.1 -2.86449 | gap 1, opp_overlap 1980169 1980185 1980190, overlap 1980178 AGCCCAGCATAACGA CCCGGCGCGCCGCG GGTT CG-GGCGCGCCTGG ACCTGCGCTAGCTTT Bphy_1734 1981451 - 1980219 - | aminotransferase class I and II TERM 2118 1981257 - 1981224 - G 73 -5.7 -4.38712 | overlap 1981226 GTTATGCGTATAAAA CGTCGCGCCCAGCGC AAGT GCGGCGCTCGCGGCG TCGCGGATGAACGTC Bphy_1735 1982461 - 1981559 - | LysR family transcriptional regulator TERM 2119 1982570 - 1982559 - H 81 -3.6 -5.1675 | opp_overlap 1982566 CGACGCAGCAAAAAA GCGC AGAC GCAC GCGGGGCGGGCCTCG Bphy_1736 1982880 - 1983278 + | putative transposase A protein TERM 2120 1983291 - 1983321 + F 100 -16.1 -4.56597 | gap 1, overlap 1983308 TGACCATGCACTCTA CGCTTCCGGGCGCC CAAG GGCGCCCGGC-GCG TTTTTGAGGCCGGCA Bphy_1737 1983621 - 1983938 + | hypothetical protein TERM 2121 1984073 - 1984095 + T 100 -13.5 -5.53991 | AAGTAATTCCGGTAT GCCCGTATC CTCGC GATACGGGC TTTTTTTCGTCCATG Bphy_1738 1984562 - 1984248 - | hypothetical protein TERM 2122 1984307 - 1984292 - G 79 -2.6 -5.00616 | gap 1 CTGCGCCGGAAAAAA CGTAATG ATG CAT-ACG GCGCGCGTCCCAGTC TERM 2123 1984380 - 1984346 - G 75 -12 -3.53012 | opp_overlap 1984356 GCTCGTCGCGCGAAA GCCGCGCGAACTCGGC GCG GCCGCGTTCGGTCAGC ACCGCGATGTCCACA TERM 2124 1984501 - 1984478 - G 88 -11 -4.26189 | gap 1, overlap 1984479 GCAGAAATTCGAAAA CGCC-TGGGCG CTT CGCCCACGGCA CCTGACGGTATTGCG TERM 2125 1984874 - 1984903 + G 78 -7.8 -4.37886 | TGCTGCGCAACGCCC GCACGCTGATCG GCACGA CGACCATCGTGC TTTTCTGGGCGGTCG TERM 2126 1984924 - 1984940 + G 71 -9.4 -3.7948 | overlap 1984907 1984916 TGGGCGGTCGGCGCA GGCTGG CTCGC CCAGCC TTTGCTCGATCTTGC TERM 2127 1985450 - 1985434 - g 71 -10.8 -3.60098 | opp_overlap 1985426 1985441, overlap 1985397 ACCCGGCACGCCAAA CGCGGC GTGCT GCCGCG TCGGGAGAATTTCTT Bphy_1739 1984855 - 1985541 + | hypothetical protein Bphy_1740 1985836 - 1985567 - | hypothetical protein Bphy_1741 1985895 - 1986131 + | putative signal peptide protein TERM 2128 1986171 - 1986211 + F 91 -17 -3.53091 | opp_overlap 1986178, overlap 1986178 CGGGTGCGGACAGGG CAAACAAGCCGAAGCCGT TCAAT ACGGCCTCGGCTTTTTTG TTTGCGCCAGCGGAT TERM 2129 1986178 - 1986204 + F 100 -13.7 -5.63517 | opp_overlap 1986178, overlap 1986171 GGACAGGGCAAACAA GCCGAAGCCGT TCAAT ACGGCCTCGGC TTTTTTGTTTGCGCC TERM 2130 1986204 - 1986178 - f 100 -15.9 -3.95378 | opp_overlap 1986171 1986178 GGACAGGGCAAACAA GCCGAAGCCGT TCAAT ACGGCCTCGGC TTTTTTGTTTGCGCC Bphy_1742 1986352 - 1986609 + | hypothetical protein TERM 2131 1986633 - 1986657 + T 71 -11.4 -3.30474 | ACGCGCGTTATCCGG GGCCCGGC CGCCATATT GCCGGGCC TTGCTGCTTCTGGAG Bphy_1743 1987027 - 1986704 - | antibiotic biosynthesis monooxygenase Bphy_1744 1987323 - 1988597 + | diguanylate phosphodiesterase Bphy_1745 1989025 - 1988618 - | class I peptide chain release factor TERM 2132 1989472 - 1989487 + G 91 -9 -4.81551 | GTCGCTGGTGTCGGG CGCGAT CGGC ATCGCG TTTTTGCTGTCGCTG TERM 2133 1989501 - 1989523 + G 74 -5.4 -4.52589 | overlap 1989503 CGTTTTTGCTGTCGC TGCTGCGGGG GCG CCCTGCCGTG TTTTATCTGACGCGC Bphy_1746 1989197 - 1989856 + | putative transmembrane protein Bphy_1747 1991871 - 1989853 - | exodeoxyribonuclease V, alpha subunit TERM 2134 1989978 - 1989944 - G 87 -17.8 -2.82516 | GCGCGCATCAGCACA GCGCGCGAGCCGACCA CTT CGACCCGCTCGCGCGC CCGCGTCACGGCCGT TERM 2135 1990204 - 1990167 - G 73 -12 -3.38812 | gap 2, overlap 1990165 CGCCGCGGAAGAAGA CGCGCAACGCGCCGTCCG CGCC CGG-CAGCGCGATGC-CG ATATCGCCATTGAAC TERM 2136 1990318 - 1990333 + g 71 -11.8 -3.29471 | GGCACGGCGCACCTG CGCGGC CATC GCCGCG TTCATGTGATCGACG TERM 2137 1990692 - 1990710 + g 77 -11.6 -3.75153 | opp_overlap 1990680 1990685, overlap 1990693 CAACGCAATCCGCAA GCGGCGCG AGC CGCGCCGG TTTCGCTTCAGACGG TERM 2138 1990693 - 1990709 + g 77 -15.1 -2.84878 | opp_overlap 1990680 1990685, overlap 1990692 AACGCAATCCGCAAG CGGCGCG AGC CGCGCCG GTTTCGCTTCAGACG Bphy_1748 1995593 - 1991868 - | exodeoxyribonuclease V, beta subunit TERM 2139 1993636 - 1993597 - G 75 -4.2 -4.59773 | gap 1, overlap 1993562 1993598 CTGTAGCGCGAAAAA CGCTCGACCCAACCCATCG CAT CGACGGTCTGCGT-GAGCT CGCCTGCGGCAGGTG TERM 2140 1994970 - 1995009 + g 76 -9.8 -4.07568 | opp_overlap 1994994, overlap 1994971 CGGCTTCTTCAGGCG CCGCGCAAGCTGTGCGTC AAGC GACGCCGGGCCTGCGCGC TTTTCGACCAGCCAC TERM 2141 1994971 - 1995008 + g 72 -13.3 -3.04398 | opp_overlap 1994994, overlap 1994970 GGCTTCTTCAGGCGC CGCGCAAGCTGTGCGTC AAGC GACGCCGGGCCTGCGCG CTTTTCGACCAGCCA Bphy_1749 1998955 - 1995590 - | exodeoxyribonuclease V, gamma subunit TERM 2142 1997458 - 1997509 + g 88 -17.8 -3.16668 | gap 1 CGGGAACCGCGCTGT CGGCGGCCGGCA-CGGGCGCGAGGC CGC GCCGCGCGCCCGCTGCCGCAAGCCA TTCCTGGACGTCTTC TERM 2143 1997965 - 1998009 + g 74 -10.5 -3.68886 | opp_overlap 1997987, overlap 1997961 CGGCGAGCCAGGTCG GCGCGGCATTCTCCGCGAAGT ACG ACGCCTCGGACGACGCCGCGC TTTCCGTCAGTTCGT Bphy_1750 1999163 - 2001583 + | protein of unknown function DUF893 YccS/YhfK Bphy_1751 2001841 - 2001596 - | hypothetical protein Bphy_1752 2002400 - 2001918 - | AsnC family transcriptional regulator TERM 2144 2002961 - 2003003 + G 90 -19.1 -2.70932 | gap 1, opp_overlap 2002942 2002983, overlap 2002963 GGCGGACAGCGATTG CGCGGCGCCC-GTGCGCGAG CAAT CGCGCGAACCGGGCGCCGTG TCGTTCACGCGCGCA TERM 2145 2002963 - 2003001 + G 89 -18.1 -2.90075 | gap 1, opp_overlap 2002942 2002983, overlap 2002961 CGGACAGCGATTGCG CGGCGCCC-GTGCGCGAG CAAT CGCGCGAACCGGGCGCCG TGTCGTTCACGCGCG Bphy_1753 2002533 - 2003165 + | cysteine dioxygenase type I TERM 2146 2003231 - 2003193 - T 72 -9.6 -3.72576 | gap 1, opp_overlap 2003198, overlap 2003197 2003198 CCCGCCCGCATCAAA TGAA-GGGGCGTCTCGC CTGGCC GCGTGACGCCCTTTTCA TTGTCGAAAACTCAT TERM 2147 2003226 - 2003197 - T 71 -10.6 -3.56704 | opp_overlap 2003198, overlap 2003193 2003198 CCCGCATCAAATGAA GGGGCGTCTCGC CTGGCC GCGTGACGCCCT TTTCATTGTCGAAAA TERM 2148 2003225 - 2003198 - T 80 -14.1 -2.73701 | opp_overlap 2003198, overlap 2003197 2003193 CCGCATCAAATGAAG GGGCGTCTCGC CTGGCC GCGTGACGCCC TTTTCATTGTCGAAA TERM 2149 2003198 - 2003225 + T 100 -14.1 -4.48987 | opp_overlap 2003197 2003193 2003198 CCGCATCAAATGAAG GGGCGTCTCGC CTGGCC GCGTGACGCCC TTTTCATTGTCGAAA Bphy_1754 2005891 - 2003252 - | MscS mechanosensitive ion channel TERM 2150 2005107 - 2005055 - G 72 -12.7 -3.14881 | gap 1, overlap 2005043 CAACGCGGCGACGAA CGCGACGATCCACGGACCCACGCG GCGCAG CGCGAAGATCAGCAGATCG-CGCG TGGTGGGATTCGCAT TERM 2151 2005874 - 2005818 - G 100 -15.8 -4.53703 | gap 1, overlap 2005819 AAAACAATACGAAAA CCGGCGTCAATCGCCAGCAGC-CCGCC GGAT GACGGCGCAGCCCGCGATTCACGCCGC GCAGGGCATGACTTC TERM 2152 2005873 - 2005819 - G 100 -19.3 -3.29781 | gap 1, overlap 2005818 AAACAATACGAAAAC CGGCGTCAATCGCCAGCAGC-CCGCC GGAT GACGGCGCAGCCCGCGATTCACGCCG CGCAGGGCATGACTT TERM 2153 2006034 - 2006066 + r 95 -17.7 -3.55622 | overlap 2006006 CGAGCCGCTCCGGTG CGCCGTGCGGCGC TTGCCTT GCGCCTCACGGCG TTTGAAGCCGTTCAG Bphy_1755 2006725 - 2006078 - | NAD-dependent epimerase/dehydratase TERM 2154 2006802 - 2006783 - R 100 -9.2 -5.40474 | opp_overlap 2006785 2006795, overlap 2006785 ATTTGGTTAAAAAAA GACGGGGC GCCC GCCCCGTG CTTGCGCATGCTGCT TERM 2155 2006800 - 2006785 - R 93 -11.8 -4.34482 | opp_overlap 2006785 2006795, overlap 2006783 TTGGTTAAAAAAAGA CGGGGC GCCC GCCCCG TGCTTGCGCATGCTG TERM 2156 2006785 - 2006800 + r 70 -11.8 -2.72661 | opp_overlap 2006783 2006785, overlap 2006795 TTGGTTAAAAAAAGA CGGGGC GCCC GCCCCG TGCTTGCGCATGCTG Bphy_1756 2007316 - 2006822 - | BadM/Rrf2 family transcriptional regulator Bphy_1757 2007851 - 2007381 - | hypothetical protein Bphy_1758 2008028 - 2008609 + | PfpI family intracellular peptidase TERM 2157 2009011 - 2009035 + G 79 -6.4 -4.4767 | gap 1, overlap 2009004 2009006 GTCGATCCGCGGCCG CAGGCTGC-TG AAGC CACGCCGCCTG TTTTCTGCTCCCTGA Bphy_1759 2008727 - 2009050 + | hypothetical protein Bphy_1760 2010782 - 2009091 - | histidine kinase TERM 2158 2009456 - 2009417 - G 77 -4.7 -4.60797 | opp_overlap 2009438 2009439 2009444, overlap 2009418 CCTTCACATAGAAAA TGCGCAGCGTCTGCACC CCGGGC GGCGCGGGCGCCGTGCC GATTTCGACGATGCC TERM 2159 2009439 - 2009457 + g 71 -13.8 -2.73124 | opp_overlap 2009418 2009417, overlap 2009438 2009444 CGTCTGCACCCCGGG CGGCGCGG GCG CCGTGCCG ATTTCGACGATGCCC TERM 2160 2009936 - 2009956 + g 70 -7.6 -4.04394 | gap 1, overlap 2009936 2009952 TGAAGGTCTCGTTTT C-CTGCGTC TGCT GACGCAGCG TTTCGTTGGTTTGCG TERM 2161 2010105 - 2010138 + g 70 -11 -3.35679 | gap 1, overlap 2010101 ACCGCGTGTAAGCGG CGCGAG-CGGCTCGT TGCTC GCGAGCCGGCTGGCG TTGTCCGTCAGCAAC TERM 2162 2012039 - 2012075 + G 78 -14.3 -3.29626 | CCTGATGCATCCGCT CGGCGCGCTGGTGACGG GCG CCGTCGCGGGCGGGCTG TTCGTGTACATGTTC Bphy_1761 2011206 - 2012408 + | Rh family protein/ammonium transporter TERM 2163 2012507 - 2012521 + F 79 -12.8 -3.45118 | GATCGGCCCCCGCCA CCGGCG AGC CGCCGG TTCCTTATACGATCG TERM 2164 2012849 - 2012890 + G 74 -15.1 -2.57274 | overlap 2012839 2012848 2012846 ATCGGCGCGGCGGTC GCGTACTTCGGGCGCAATC CGCA GATCGCGCCCGAATGGCGC CTCTTCATTATCACG Bphy_1762 2012693 - 2013073 + | CrcB protein TERM 2165 2013177 - 2013197 + F 71 -11.8 -2.96692 | TCATGGCTCAGCGTT GCCGCGCG CGTAT CGCGTGGC TGTATCATCGTCGTC Bphy_1763 2013227 - 2013580 + | hypothetical protein Bphy_1764 2013688 - 2013861 + | hypothetical protein Bphy_1765 2014589 - 2013924 - | hypothetical protein Bphy_1766 2015580 - 2014705 - | CHAD domain-containing protein TERM 2166 2015020 - 2015040 + g 84 -9 -4.56597 | gap 1 TGCGCGCGACGCCTT GCGCATGCG CTTG CGCA-GCGC TTTTTCAGCGACGCG Bphy_1767 2016028 - 2015693 - | hypothetical protein Bphy_1768 2016399 - 2016845 + | PRC-barrel domain-containing protein TERM 2167 2016865 - 2016884 + F 82 -8.5 -4.45544 | opp_overlap 2016864, overlap 2016864 GAGTGCGGTACACAC GCCGGCG TAGCGC TGCCGGC TTTTCCTTCCTAGAC TERM 2168 2016903 - 2016943 + F 88 -14.1 -3.55444 | gap 2, overlap 2016904 2016906 2016935 TCCTTCCTAGACGCT C-ATGC-CGGCGGCCGTCA CTTTC TGACGGCCGCCGCGCTTCG TTTGGCCGGTGCGCG TERM 2169 2016906 - 2016939 + F 100 -20.4 -3.51708 | gap 1, overlap 2016904 2016903 2016935 TTCCTAGACGCTCAT GC-CGGCGGCCGTCA CTTTC TGACGGCCGCCGCGC TTCGTTTGGCCGGTG TERM 2170 2017098 - 2017077 - f 100 -17.3 -5.75945 | ATCGCCGAAAAAAAA GGCGCCACG TTAC CGTGGCGCC TTCAAAAAGTTCTAG TERM 2171 2017223 - 2017243 + F 100 -14.7 -4.26076 | overlap 2017224 2017227 TGGGCGCGGCGGATT TGACGCGCG CCG CGCGCGTCG TTTTACTGACAATGG TERM 2172 2017224 - 2017242 + F 88 -16 -3.15324 | overlap 2017223 2017227 GGGCGCGGCGGATTT GACGCGCG CCG CGCGCGTC GTTTTACTGACAATG TERM 2173 2017391 - 2017381 - f 84 -2.4 -5.46657 | opp_overlap 2017381, overlap 2017384 GATCGTAAGAAAAAA GGAC TTA GGCC TTTCTGAGAGAAGGT TERM 2174 2017565 - 2017531 - g 75 -7.1 -4.4078 | overlap 2017534 2017554 TGCCGCGAAGGAAAA GGACG-GCTCGGGCGAC GAA GTCACC-GCGCTCGCCC GCGGCCTGACGGTAC Bphy_1769 2017481 - 2018317 + | IclR family transcriptional regulator Bphy_1770 2018621 - 2018400 - | hypothetical protein TERM 2175 2018833 - 2018812 - g 100 -2.9 -5.84381 | overlap 2018815 GGACGAACAAAAAAA GCAGCCTGA ATCA TCACGCCAC ACCGAACCCGCCAGC Bphy_1771 2018795 - 2020204 + | RND family efflux transporter MFP subunit TERM 2176 2021146 - 2021126 - g 77 -8.3 -4.28111 | GACAGCATCAAGAAA CTGCTGC CCACGCT GCAGCAG TCGCTGCCCGCCGCG Bphy_1772 2020220 - 2023357 + | acriflavin resistance protein Bphy_1773 2023374 - 2026685 + | acriflavin resistance protein Bphy_1774 2027189 - 2026725 - | putative signal peptide transmembrane protein TERM 2177 2027286 - 2027266 - R 71 -7.5 -4.19817 | GGCACGTAGCTAAAA GCGCGGC GCATGAA GCCGCAC CGCTCACCCGCCACC Bphy_1775 2027876 - 2027313 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Bphy_1776 2029384 - 2028038 - | diguanylate phosphodiesterase TERM 2178 2030255 - 2030243 - g 71 -9.1 -3.72576 | CCCTCGTCGAGGAAA TGCGC CAC GCGCA ACAGAAGGCGGATGC Bphy_1777 2029702 - 2031531 + | diguanylate cyclase/phosphodiesterase Bphy_1778 2031599 - 2033056 + | putative signal transduction protein Bphy_1779 2034489 - 2033137 - | diguanylate phosphodiesterase TERM 2179 2033471 - 2033431 - G 76 -6.2 -4.45945 | gap 2, overlap 2033421 2033433 2033447 ATCGACGAACGAAAA CACGCCCGTGAGAAAAGCCG CGT CGG-TTTCGTCACGGCCG-G CTTCGGGCAGACGTT TERM 2180 2033470 - 2033433 - G 73 -9.9 -3.83437 | gap 1, overlap 2033421 2033431 2033447 CGACGAACGAAAACA CGCCCGTGAGAAAAGCCG CGT CGG-TTTCGTCACGGCCG GCTTCGGGCAGACGT TERM 2181 2033468 - 2033447 - G 83 -9.3 -4.37092 | overlap 2033433 2033431 ACGCCCGTGAGAAAA GCCGCGTCG GTTT CGTCACGGC CGGCTTCGGGCAGAC TERM 2182 2034708 - 2034740 + r 100 -22.1 -2.64735 | opp_overlap 2034708, overlap 2034714 AACAAGGCCAAAAAA GCACAACCGGCCGTT CGA GGCGGCCGGTTGTGC TGCTGTCGCTGCGAT TERM 2183 2034740 - 2034708 - R 100 -20.7 -5.11937 | opp_overlap 2034708 2034714 AACAAGGCCAAAAAA GCACAACCGGCCG TTCGAGG CGGCCGGTTGTGC TGCTGTCGCTGCGAT TERM 2184 2034714 - 2034734 + r 79 -12.5 -3.45849 | opp_overlap 2034708, overlap 2034708 GCCAAAAAAGCACAA CCGGCCGTT CGA GGCGGCCGG TTGTGCTGCTGTCGC Bphy_1780 2035577 - 2034780 - | cationic amino acid ABC transporter, periplasmic binding protein TERM 2185 2035180 - 2035202 + g 72 -9 -4.1711 | CCCTTGAGCGAAGCG GGCGTCGGCT GCA GGCCGCTGCC TTTCTTCGCGATCAT Bphy_1781 2035948 - 2035661 - | hypothetical protein TERM 2186 2035887 - 2035907 + g 91 -6.7 -5.06414 | overlap 2035896 CAGTCGATCTTCTTG CCTGCGGCG CGG CGTTGCCGG TTTTTCTTCGCGGGC TERM 2187 2036595 - 2036575 - R 95 -6.7 -5.4505 | overlap 2036576 CCCGCGAAGAAAAAA CCGGCAACG CCG CGCCGCAGG CAACAACAGCGACTG Bphy_1782 2037670 - 2036627 - | succinylglutamate desuccinylase Bphy_1783 2038994 - 2037654 - | succinylarginine dihydrolase Bphy_1784 2040467 - 2039004 - | succinylglutamic semialdehyde dehydrogenase Bphy_1785 2041503 - 2040478 - | arginine N-succinyltransferase Bphy_1786 2042552 - 2041500 - | arginine/ornithine succinyltransferase, alpha subunit TERM 2188 2042160 - 2042135 - G 81 -16.9 -2.63596 | overlap 2042117 2042137 GCGCACGCGACATCA GATGCGCGGCG GCAT CGCCACGCATC TCCGGGTCGATGTAG TERM 2189 2042158 - 2042137 - G 73 -13.7 -2.85999 | overlap 2042117 2042135 GCACGCGACATCAGA TGCGCGGCG GCAT CGCCACGCA TCTCCGGGTCGATGT TERM 2190 2042457 - 2042430 - G 74 -13.4 -3.29144 | gap 1, opp_overlap 2042431, overlap 2042415 2042431 CGAGTCTTCCGACAA CGCGACGCGCGCC TCC AGCGCGCGCCG-G TCGTGTGGCAGCGAG TERM 2191 2042457 - 2042431 - G 70 -13.6 -2.57344 | opp_overlap 2042431, overlap 2042430 2042415 GAGTCTTCCGACAAC GCGACGCGCGCC TCC AGCGCGCGCCGG TCGTGTGGCAGCGAG Bphy_1787 2043810 - 2042581 - | succinylornithine transaminase family protein TERM 2192 2043450 - 2043481 + g 82 -15.8 -3.17075 | overlap 2043454 CATGACGGTCGAAGG CGACGCGGCGCGCA AGCT TGAGCGCCGCTTCG TTGGCTTCGGCGCCC TERM 2193 2043454 - 2043477 + g 80 -13.8 -3.4052 | overlap 2043450 ACGGTCGAAGGCGAC GCGGCGCGCA AGCT TGAGCGCCGC TTCGTTGGCTTCGGC Bphy_1788 2044987 - 2043935 - | AraC family transcriptional regulator Bphy_1789 2045812 - 2045021 - | ABC transporter related Bphy_1790 2046619 - 2045906 - | polar amino acid ABC transporter, inner membrane subunit Bphy_1791 2047337 - 2046648 - | polar amino acid ABC transporter, inner membrane subunit Bphy_1792 2047762 - 2048370 + | methyltransferase type 11 Bphy_1793 2049432 - 2048401 - | patatin Bphy_1794 2050131 - 2049550 - | putative lipoprotein TERM 2194 2050874 - 2050893 + H 80 -9.2 -4.14013 | overlap 2050860 2050889 2050890 CGGCGCGACGCATAT CGGGCCTG ATAT CGGGCCTG TTTTCAGGGGTTTTG TERM 2195 2051304 - 2051288 - g 75 -7.9 -4.25104 | CGGGCGGCACGAAAA CGATCCG CGT CGGCTCG GGTGGCGTGATGCTG Bphy_1795 2051059 - 2052069 + | luciferase family protein Bphy_1796 2053285 - 2052122 - | alpha/beta hydrolase fold protein Bphy_1797 2053710 - 2054978 + | glucose-1-phosphate adenylyltransferase TERM 2196 2055030 - 2055065 + F 74 -11 -3.53012 | gap 1 TGCCCGGCACGGCAG GCGCCGTGCGCGCGGCG GCA CGTTGCGCGCCCA-CGC TTTGGCAAGGCCCAC Bphy_1798 2055160 - 2056620 + | glycogen/starch synthase, ADP-glucose type Bphy_1799 2056898 - 2057761 + | pyridoxal kinase TERM 2197 2058099 - 2058121 + F 95 -13.4 -4.26903 | overlap 2058100 ACGTCCTATAATGCC TGCCGCGCGA ACT TTGCGCGGCG TTTTAATGGCATGGG TERM 2198 2058100 - 2058120 + F 83 -14.7 -3.1582 | overlap 2058099 CGTCCTATAATGCCT GCCGCGCGA ACT TTGCGCGGC GTTTTAATGGCATGG Bphy_1800 2058160 - 2058621 + | hypothetical protein TERM 2199 2058727 - 2058707 - T 95 -6.7 -5.4505 | overlap 2058708 TCCGCGAAGAAAAAA CCGGCAACG CCG CGCCGCAGG CAAGAACATCGACTG Bphy_1801 2060669 - 2058771 - | putative transmembrane protein TERM 2200 2060287 - 2060267 - G 75 -3.1 -4.7373 | overlap 2060268 2060270 2060271 CGATTCCAGGAAAAA TCACCGTGC GCA GCACGCCGT CCTGGAAGGTCGGCG TERM 2201 2060635 - 2060665 + g 71 -13.9 -2.69151 | opp_overlap 2060621 2060618, overlap 2060633 AGCAGCGGCAGCATG GCGGCCGCGCGCA GCCTG TGCACGCGGCGGC TCATGTCTCACGCGC Bphy_1802 2061511 - 2060666 - | AraC family transcriptional regulator TERM 2202 2061635 - 2061660 + H 84 -12.5 -3.66874 | gap 1, opp_overlap 2061628 2061627 ATCACAACGGCGGCA GGCGCGGCG-CG AAG CGTCGCCGCCCC TTTCAATCGACTTCG Bphy_1803 2061695 - 2062243 + | hypothetical protein Bphy_1804 2063660 - 2062272 - | major facilitator transporter TERM 2203 2062354 - 2062326 - G 70 -7.3 -3.99374 | overlap 2062328 CTTCACGAAGAAGAA CAGCGAGCACAGC ACG GCCGCGCCCACCA CGAAGAACGCCGGTG Bphy_1805 2065027 - 2063804 - | GntR family transcriptional regulator Bphy_1806 2065150 - 2066004 + | LysR family transcriptional regulator Bphy_1807 2066703 - 2066029 - | hypothetical protein TERM 2204 2066337 - 2066389 + g 74 -11.2 -3.61398 | gap 2, opp_overlap 2066364 CGACCTCGTCTTCAG GACGGCGCTGCGGTTGCT-G-GCCGA AGA TCGGCTCCGGCGGACGCAGCACCGAC TTCTTGCGAACGGGA TERM 2205 2066425 - 2066435 + g 72 -8.2 -4.00868 | opp_overlap 2066423 2066424 GGTGCCGCGAAAACG CGCC AAG GGCG TTTCGTTGTCGATGG Bphy_1808 2067882 - 2067070 - | N-formylglutamate amidohydrolase TERM 2206 2067113 - 2067128 + g 84 -9 -4.56597 | overlap 2067077 GTCTTCACGAGCTTG TCGAGC AGCG GCTCGA TTTTTGCGGCGAGCG Bphy_1809 2069367 - 2067937 - | formiminoglutamate deiminase Bphy_1810 2070584 - 2069364 - | imidazolonepropionase TERM 2207 2069969 - 2069943 - G 76 -9.4 -4.18018 | opp_overlap 2069958 2069961, overlap 2069961 2069963 CTGTTCGAGCGAAAA GCCGATGCGTTC GCA GAACACGTCGAC GGCATCGACGAGTCC TERM 2208 2070295 - 2070245 - G 75 -13.8 -3.02511 | opp_overlap 2070243 CCGATTGCGCGAAGA GCGACGCCTCGTCGGCGGCACGCG TCG CGCGTACCGTCGATACGATGCCGC CGCCCTGCTTCGCAA Bphy_1811 2071258 - 2070641 - | hypothetical protein Bphy_1812 2072949 - 2071261 - | urocanate hydratase Bphy_1813 2073718 - 2073014 - | histidine utilization repressor Bphy_1814 2075272 - 2073749 - | histidine ammonia-lyase Bphy_1815 2075613 - 2075269 - | hypothetical protein TERM 2209 2075550 - 2075517 - G 90 -11 -4.42788 | opp_overlap 2075518 2075519, overlap 2075518 GGCAAGCGGACAAAA TGCG-GCGCAGGGCCG CATG CGGC-CTGCGCGCGCC GCCCGGCGATCCGAT TERM 2210 2075549 - 2075518 - G 83 -14.5 -3.25191 | opp_overlap 2075518 2075519, overlap 2075517 GCAAGCGGACAAAAT GCG-GCGCAGGGCCG CATG CGGC-CTGCGCGCGC CGCCCGGCGATCCGA TERM 2211 2076227 - 2076213 - g 87 -5.6 -5.03314 | GGCAGGCGCAAAAAA GCGGCA TCG TGCGGC ACGTGGGCAGCGGCG TERM 2212 2076321 - 2076309 - g 75 -6.9 -4.36914 | opp_overlap 2076309 TCGCGCTCGAGAAAA GCCCC GCA GGGAC GTTCTATTTCGTCGA Bphy_1816 2075672 - 2076577 + | NAD-dependent epimerase/dehydratase TERM 2213 2076595 - 2076580 - f 70 -11.8 -2.72461 | overlap 2076569 2076579 GAAGGGCGCGTAAAT CGCGCG ACAC CGCGCG CAAAACGTTGGCCAG Bphy_1817 2076724 - 2076906 + | hypothetical protein Bphy_1818 2077716 - 2076940 - | protein of unknown function DUF899 thioredoxin family protein Bphy_1819 2078196 - 2077768 - | activator of Hsp90 ATPase 1 family protein TERM 2214 2078483 - 2078456 - R 88 -11.2 -4.10925 | overlap 2078428 2078457 ACAGACGCTGCAAAA GCGCGCGCCG CGTCGGGT CGGCGAGCGC GGCGAACGTGCGGTC Bphy_1821 2080036 - 2078639 - | xanthine/uracil/vitamin C permease TERM 2215 2079961 - 2079947 - G 79 -5.6 -4.59773 | opp_overlap 2079946 GGTGACGCCGAAAAA GCGGTC AAT GAACGC CGTTTGCCCGTCGCG TERM 2216 2080217 - 2080205 - H 91 -7.7 -5.08601 | opp_overlap 2080213 CCATCGCAATAAAAA CATGC CGC GCATG TCGCAATGCTTATAT TERM 2217 2081479 - 2081513 + G 86 -15.7 -3.21747 | opp_overlap 2081509, overlap 2081481 2081482 CCCGCACCGCCTCCC GCACCTGTTGCCGCG TCTGC CGCGGCAACAGGCTC TTCGTCGTCCACTGC TERM 2218 2081481 - 2081511 + G 85 -16.9 -3.17229 | opp_overlap 2081509, overlap 2081479 2081482 CGCACCGCCTCCCGC ACCTGTTGCCGCG TCTGC CGCGGCAACAGGC TCTTCGTCGTCCACT TERM 2219 2081482 - 2081510 + G 91 -20.4 -2.50016 | opp_overlap 2081509, overlap 2081481 2081479 GCACCGCCTCCCGCA CCTGTTGCCGCG TCTGC CGCGGCAACAGG CTCTTCGTCGTCCAC Bphy_1822 2080528 - 2081559 + | hypothetical protein TERM 2220 2081687 - 2081706 + G 78 -10.7 -4.03234 | opp_overlap 2081679 GCACAAGTGGACGCA GGGCGAG ATCGGC CTCGCCC TTTCTATCGGCACGA Bphy_1823 2081556 - 2082815 + | major facilitator transporter TERM 2221 2082857 - 2082869 + T 90 -4.7 -5.4505 | overlap 2082856 2082858 CGGGTTGCCTGCGGG GCGGC GTT GCCGG TTTTTTCTTCGCGGG TERM 2222 2083556 - 2083544 - T 91 -4.7 -5.5112 | overlap 2083545 GCGACGAAGAAAAAA CCGGC AAC GCCGT GCGGCAGGCAAGAAC Bphy_1824 2084948 - 2083602 - | major facilitator transporter TERM 2223 2084142 - 2084115 - G 70 -2.6 -4.60797 | CGTCGACAGATAAAA CAGCACGATG TAATTCGC CGCCGTGCCG CCGATCGTCGTCACC Bphy_1825 2086130 - 2084967 - | amidohydrolase Bphy_1826 2086266 - 2087216 + | LysR family transcriptional regulator Bphy_1827 2088301 - 2087348 - | LysR family transcriptional regulator TERM 2224 2089145 - 2089161 + G 84 -13.7 -3.6682 | GGATCGCGTGTTGCC CGCGCTG TCG CAGCGCG TTTCCATGCGTGCGC Bphy_1828 2088429 - 2089781 + | NADH dehydrogenase TERM 2225 2089855 - 2089803 - T 77 -11.7 -3.54424 | opp_overlap 2089817 2089818 TGGCACGCCGTCAAA CGCGTGGCGCCAGCCGTCAGTCGAG AAA CTCGGCGGACCTTTGGCGCAGCGCG GCGCTGAACTCGTCC Bphy_1829 2090712 - 2089819 - | LysR family transcriptional regulator Bphy_1830 2090810 - 2091424 + | lysine exporter protein LysE/YggA Bphy_1831 2092402 - 2091437 - | hypothetical protein TERM 2226 2091977 - 2091953 - G 93 -6.3 -5.28176 | overlap 2091955 CGTATCGAGAAAAAA GCCGCGATAGC CGC GCTCCCACAGC GGCTTGACGATCTCG TERM 2227 2092385 - 2092372 - G 71 -9.5 -3.77196 | opp_overlap 2092383 CGACGATCCACGAAA CGCCC AGGC GGGCG AGAGAACTGGCTGTC Bphy_1832 2093793 - 2092420 - | putative transmembrane protein Bphy_1833 2095409 - 2093793 - | glycosyl transferase group 1 TERM 2228 2094539 - 2094572 + g 76 -13.8 -3.14132 | overlap 2094544 GCGTGCGCGCGGCTT GCGCGCCGTCGGCG ATCTGC CGCTGACGGTTCGC TTCATACAGCGCGAC TERM 2229 2094826 - 2094814 - G 70 -4.7 -4.37092 | AGCGCGCCGAGAAAA CCGGC ATA GCCCG TCGACACCGTGTGAT Bphy_1834 2096455 - 2095406 - | putative transmembrane protein Bphy_1835 2097863 - 2096448 - | putative transmembrane protein TERM 2230 2097534 - 2097510 - G 74 -11.4 -3.61398 | gap 1 GCCCCCCGTGAAGAA CAGCGTCGGCC ACGC GGCCG-CGCCG CCCTGATGCAGCAGC TERM 2231 2097769 - 2097750 - G 70 -6.3 -4.21194 | CTCGACGATGGAAAA CGGCCGC GACACT GCGGGCG CGACGAGGCGCCGCC Bphy_1836 2098509 - 2097958 - | hypothetical protein TERM 2232 2098658 - 2098635 - R 75 -5.8 -4.58395 | overlap 2098637 CTGATGCTGCAAAAA CACGGCTGCG TGAT CGCCGCCGAA CACGGTGCCCGCAAT TERM 2233 2098656 - 2098637 - R 77 -10.6 -3.90762 | overlap 2098635 GATGCTGCAAAAACA CGGCTGCG TGAT CGCCGCCG AACACGGTGCCCGCA TERM 2234 2100030 - 2100074 + r 90 -15.7 -3.53012 | gap 1, overlap 2100032 2100058 GAGCGTTTCGGCATC CTGCGCGGTGCG-GCCGCGC ATCGCC GCGCGCTGCGCGCCGTGCAG TTTCACGAGCCGCGC Bphy_1839 2105361 - 2102515 - | hypothetical protein TERM 2235 2103251 - 2103285 + g 77 -11.4 -3.72695 | overlap 2103252 TAGACGTTCTCGTCC TGGTTGGGCGCGTA CACCTGA TACGCGCCCGGCCC TTTCATCACGCCAAT TERM 2236 2103252 - 2103284 + g 77 -14.9 -2.83403 | overlap 2103251 AGACGTTCTCGTCCT GGTTGGGCGCGTA CACCTGA TACGCGCCCGGCC CTTTCATCACGCCAA Bphy_1840 2105875 - 2106690 + | AraC family transcriptional regulator Bphy_1841 2106778 - 2107428 + | lysine exporter protein LysE/YggA Bphy_1842 2107706 - 2107867 + | hypothetical protein TERM 2237 2107912 - 2107962 + T 73 -12.5 -2.71924 | gap 1, overlap 2107901 2107911 GGGACGCGCGCTGGG CCGCGCGTTCGCTTGCAATCGCTC TGGC GGCCGGTT-CAGGCGCCCGCGCGG ATTTCGAGCACGCTC Bphy_1843 2108210 - 2107947 - | hypothetical protein Bphy_1844 2109049 - 2108321 - | TetR family transcriptional regulator Bphy_1845 2110113 - 2109202 - | LysR family transcriptional regulator TERM 2238 2109286 - 2109272 - G 76 -5.6 -4.52589 | TCCTCGCACAGAAAA CGCTGC AAC GCATCG ACGGCTGTTTCCTGC TERM 2239 2110029 - 2110052 + g 72 -10.9 -3.53444 | TGCGGGCGAGGCGTA CGGCCGCCG CACTGA CGGCGCCCG TTTCGGCGACCGTCA Bphy_1846 2110210 - 2111106 + | hypothetical protein Bphy_1847 2111195 - 2111620 + | hypothetical protein Bphy_1848 2114362 - 2111627 - | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type TERM 2240 2111793 - 2111774 - G 77 -12.1 -3.63694 | ATCCACTTCGAAGAA CGCGCGC AGCGCA GCGCGCG TGTCGCTGCGCCCGA TERM 2241 2114059 - 2114087 + g 75 -4.3 -4.70169 | overlap 2114053 2114052 GCACCACCATCGCGA GCGCGTTCCAGCG CAA CGCGGCGGCGAGC TTTTCTTCCGTGTCG TERM 2242 2114812 - 2114778 - g 72 -8.4 -4.09685 | overlap 2114781 2114790 GGTGAGCCTCGAAAA GCAGGTCGAAGAGGCG TTG CGCCGCTTCGAGCAGG AAGTCGGCGAGCGCC TERM 2243 2114809 - 2114781 - g 72 -13.1 -3.08508 | overlap 2114778 2114790 GAGCCTCGAAAAGCA GGTCGAAGAGGCG TTG CGCCGCTTCGAGC AGGAAGTCGGCGAGC Bphy_1849 2114425 - 2115066 + | AsnC family transcriptional regulator Bphy_1850 2116771 - 2115098 - | AMP-dependent synthetase and ligase Bphy_1851 2116955 - 2117227 + | hypothetical protein Bphy_1852 2117616 - 2117245 - | hypothetical protein TERM 2244 2117714 - 2117734 + H 76 -12.5 -3.1085 | TGTCGTGCCAGATGG CGCCGCGGA TGG TGCGCGGCG TGTTCCGTCAATTGA TERM 2245 2117885 - 2117866 - g 85 -16.4 -3.17194 | opp_overlap 2117866 2117868 ATCGTTGCAACGCAA GGCGCGGC GCTC GCCGCGCC GCATCTGTTGGGACA Bphy_1853 2117767 - 2118543 + | GDSL family lipase TERM 2246 2118563 - 2118545 - T 73 -12.4 -3.07816 | opp_overlap 2118542 GGCTGATGGAGTGAA TGCGGCGC ACG ACGCCGCA TGCTCATTCGCCCAC Bphy_1854 2118872 - 2118567 - | hypothetical protein TERM 2247 2119895 - 2119915 + H 79 -12.5 -3.254 | overlap 2119893 ACCCCGCGGTTCAGG CGCAGCCGG AAA CGGGCTGCG TGTTCTGGGTGCGTG Bphy_1855 2120192 - 2120809 + | ATP dependent DNA ligase Bphy_1856 2120849 - 2121064 + | YcfA family protein TERM 2248 2121070 - 2121083 + F 75 -9.5 -3.86015 | opp_overlap 2121066 2121070 TCTGAAGTGAAGGGA GCCCC GAAC GGGGC TTTCTCCGCACCGTC TERM 2249 2121333 - 2121314 - g 88 -9.2 -4.66833 | GTCGAAGGCCAAAAA GGGCGAGG AACT CGTCGCCC TGCCCGCCAGCGTAT Bphy_1857 2121120 - 2121536 + | hypothetical protein TERM 2250 2121705 - 2121720 + T 71 -10.4 -3.62597 | CTCCAGATGCGACGG TCGCCC GAGT GGGCGA TTATTACGGAATGAA TERM 2251 2121865 - 2121905 + T 86 -12 -4.07687 | opp_overlap 2121856 CAAAACCTGCAGTTA CAGTCCGTAGCCTGTG TTCACGACT TACAGGCTGTGGACTG TTTTCACGCGGGAAT Bphy_1858 2122289 - 2121909 - | hypothetical protein Bphy_1859 2122708 - 2122289 - | hypothetical protein Bphy_1860 2122962 - 2122750 - | hypothetical protein TERM 2252 2123007 - 2122992 - R 100 -11.8 -5.45652 | ATGGGCAATAAAAAA CCCCGC CGAA GCGGGG TTGGGGTCATCGTTT Bphy_1861 2123853 - 2123014 - | hypothetical protein TERM 2253 2123879 - 2123924 + r 71 -7.5 -4.18494 | gap 1, overlap 2123883 TTCACAGGCAATTGG TGGTTAGAGCCGCCCTGGTGTT GGT AGCACCTTGGCGGCTC-GCTCA TTTTACATCCACATC Bphy_1862 2124419 - 2123922 - | hypothetical protein Bphy_1863 2124988 - 2124416 - | glycoside hydrolase family protein Bphy_1864 2125238 - 2124990 - | hypothetical protein TERM 2254 2125218 - 2125196 - G 76 -9.1 -4.07568 | opp_overlap 2125194 2125196 2125198 CTGTGTTTGCCAAAA GTTCAGCGC GGTAT GCGCTGATC TCTTGCTGAAGCGTG TERM 2255 2125327 - 2125312 - H 100 -11.8 -4.98531 | opp_overlap 2125324, overlap 2125291 CCCGGAAATGAAAAA GCCGCC CGAA GGCGGC TGGTGGTCGGTTGTT Bphy_1865 2125474 - 2125758 + | hypothetical protein TERM 2256 2126108 - 2126098 - g 77 -4.6 -4.65916 | overlap 2126100 CGTACGCGAACAAAA CAGG GGT CCCG ACCGCATACTTCACG TERM 2257 2126426 - 2126399 - g 71 -9.8 -3.75629 | CAGCCGCAATCGAAA CGTGCCGCCGCT CTGG AACGACGTCACG ACAGTGGAACTCAAG Bphy_1866 2125761 - 2126453 + | hypothetical protein TERM 2258 2126925 - 2126909 - g 82 -5.8 -4.76087 | CACACAACAAAGAAA GCGCAC TGATC GTGCAC CGCGAGGACTGGCTG TERM 2259 2127049 - 2127082 + G 87 -5.9 -4.99638 | overlap 2127050 2127053 AATCCGTTCCTCTGG ACGATGCCGATCGAG CTAA CTGGATCGGCAATGG TTTTTCTCTACCTCT TERM 2260 2127127 - 2127117 - g 70 -4.6 -4.3767 | overlap 2127125 2127126 GCACAGCAGAATAAA GCGC CAA ACGC TGACCCTCGCGGTCA Bphy_1867 2126506 - 2127699 + | acyltransferase-like protein Bphy_1868 2128753 - 2127881 - | hypothetical protein TERM 2261 2128517 - 2128550 + g 70 -7.4 -3.96216 | opp_overlap 2128520 2128521, overlap 2128520 GCGACCTGGACCGCA CAACGCCTTGATCG CGGCGA CGATCTGGGCATTG TTGTTTCGATCAGGC Bphy_1869 2129356 - 2128763 - | hypothetical protein Bphy_1870 2130468 - 2129365 - | baseplate J family protein Bphy_1871 2131685 - 2130468 - | GP46 family protein TERM 2262 2130616 - 2130658 + g 71 -9.8 -3.7829 | overlap 2130636 CCGTCGTCGATCATC CATTGCAGCGCCTCAACGAT GTA GTCGTAGGCGCGTTGCAACG TTTCCTGCGTCTGCT Bphy_1872 2132281 - 2131682 - | phage baseplate assembly protein V Bphy_1873 2133369 - 2132278 - | Mu P family protein Bphy_1874 2134845 - 2133373 - | DNA circulation family protein Bphy_1875 2136644 - 2134842 - | putative membrane protein, phage K related Bphy_1876 2137050 - 2136763 - | hypothetical protein Bphy_1877 2137425 - 2137054 - | hypothetical protein TERM 2263 2137472 - 2137444 - R 93 -13.2 -4.36914 | gap 1, opp_overlap 2137437, overlap 2137445 2137446 GGGCTCTCCAGAAAA GC-GAAAGCCGCC CTAA GGCGGCTCTCAGC GGTGCGGTTTTACCT TERM 2264 2137470 - 2137445 - R 82 -13.3 -3.21934 | opp_overlap 2137437, overlap 2137444 2137446 GGCTCTCCAGAAAAG CGAAAGCCGCC CTAA GGCGGCTCTCA GCGGTGCGGTTTTAC TERM 2265 2137469 - 2137446 - R 78 -14.6 -2.52946 | opp_overlap 2137437, overlap 2137445 2137444 GCTCTCCAGAAAAGC GAAAGCCGCC CTAA GGCGGCTCTC AGCGGTGCGGTTTTA Bphy_1878 2138968 - 2137487 - | Mu tail sheath family protein Bphy_1879 2139147 - 2138971 - | hypothetical protein Bphy_1880 2139720 - 2139157 - | hypothetical protein Bphy_1881 2140049 - 2139717 - | hypothetical protein Bphy_1882 2141086 - 2140049 - | putative phage protein GP20 TERM 2266 2140626 - 2140651 + g 88 -10.5 -4.4078 | gap 1 TGGAACCAGTCGTAT TTCACGG-TGCC ATC GGCGTCCGTGAA TTTTCCTTGCACAGC TERM 2267 2140826 - 2140862 + g 72 -7.2 -4.21194 | gap 1, opp_overlap 2140851 2140852 GATCGTATCGGCGTG GCG-CAGACGCGGCACT TCGA AGTAACGCGCCTGACGC TTTTCCGTCGTGCGC TERM 2268 2141126 - 2141111 - R 100 -11.8 -4.98531 | opp_overlap 2141111 2141110 2141108 2141106, overlap 2141091 CCTTCAAATGAAAAA GCCGCC CGAA GGCGGC CTGTCTTTTTCGAGT TERM 2269 2141111 - 2141126 + r 70 -11.8 -2.72233 | opp_overlap 2141091 2141111, overlap 2141110 2141108 2141106 CCTTCAAATGAAAAA GCCGCC CGAA GGCGGC CTGTCTTTTTCGAGT Bphy_1883 2141797 - 2141150 - | putative phage protein GP19 Bphy_1884 2142491 - 2141832 - | hypothetical protein Bphy_1885 2143397 - 2142519 - | peptidase S49 TERM 2270 2143273 - 2143259 - G 95 -12.8 -4.25104 | TCGGCTTCACGAAAA CCGGCG CTT CGCCGG CGAACTCGACATCGG Bphy_1886 2144173 - 2143394 - | hypothetical protein TERM 2271 2144212 - 2144193 - R 88 -15 -3.53031 | overlap 2144189 CTCAGCTGAAACGAA GACGCGCC CGAA GGCGCGTC AAGGACTATTGCGGT Bphy_1887 2145888 - 2144218 - | lambda family phage portal protein TERM 2272 2144630 - 2144665 + g 73 -14.1 -2.80492 | opp_overlap 2144625, overlap 2144627 CGACGAGACAGCGTC TTCCAGCTTTCGAGC ATCGCA GCTCGAGCGCTGGAA TAGTTCGTCCTGCTC Bphy_1888 2146133 - 2145888 - | hypothetical protein Bphy_1889 2148168 - 2146141 - | terminase GpA TERM 2273 2147023 - 2147050 + g 72 -8.4 -3.98627 | gap 1 CGGGCGATACGGCAT GCCGGCCTGTGTG TTC CAC-CAGGTCTGC TTCTTCTCTTCGTCG TERM 2274 2147545 - 2147520 - G 70 -11.1 -3.37685 | gap 1, opp_overlap 2147541 2147542, overlap 2147511 2147518 2147521 AAAAGTCGGGAAACA TGCGATGCCCGC AAT GCGGGCA-CGCG ATCGACGCGCGGCGT TERM 2275 2147544 - 2147521 - G 74 -14.6 -2.61888 | gap 1, opp_overlap 2147541 2147542, overlap 2147511 2147520 2147518 AAAGTCGGGAAACAT GCGATGCCCGC AAT GCGGGCA-CGC GATCGACGCGCGGCG TERM 2276 2147878 - 2147899 + g 72 -10.9 -3.4582 | overlap 2147876 CAGCGCCGGCGTCAC GCGGATCAG CGGG CTGATTCGC TCTTTGCTGAACTGC Bphy_1890 2148814 - 2148221 - | hypothetical protein TERM 2277 2148605 - 2148628 + g 71 -10.4 -3.60006 | CCCTTTCGCCGCCAG GGTAACAGAC TGCC GTTTGTTACC TTTGGCCGTCTGCTT Bphy_1891 2149561 - 2148983 - | hypothetical protein TERM 2278 2149022 - 2149046 + g 84 -12.9 -3.71848 | opp_overlap 2149004 GAGTTCGTGCTTCAG GATCTGCGGGA ACT TCTCGCGGATC TTCTTCATCAGCGCC Bphy_1892 2149841 - 2149563 - | hypothetical protein TERM 2279 2149885 - 2149863 - R 100 -11.3 -5.64421 | gap 1 ACCGGAAATAAAAAA GCCAGCGACG AAGG CG-CGCTGGC GAATCCCACGACTCT TERM 2280 2150160 - 2150136 - R 100 -13.6 -5.69262 | gap 1, opp_overlap 2150133 GCACAAAAACAAAAA GCCCGCC-GTC TTTC GACTGGCGGGC TCGTGAATTTGTGCC Bphy_1893 2150895 - 2150350 - | hypothetical protein TERM 2281 2150880 - 2150904 + g 77 -12.2 -3.59087 | gap 1, opp_overlap 2150849, overlap 2150898 2150902 TGGGCTGACCGAGCG CCGCAGCGCGA TCCA TCG-GCTGCGG TTTGCCAATCGTATT Bphy_1894 2151798 - 2151184 - | hypothetical protein TERM 2282 2151700 - 2151746 + g 70 -5.7 -4.3295 | gap 1, overlap 2151732 GTATTTCGATGTTCC GCCCCACCAGCTGCG-CTCCAG TTGA TTGCAGCCGAGGCAGGTGCGGC TTTGCTTTTCTTCCA Bphy_1895 2152049 - 2151795 - | hypothetical protein Bphy_1896 2152312 - 2152046 - | hypothetical protein Bphy_1897 2152590 - 2152309 - | hypothetical protein Bphy_1898 2152847 - 2152587 - | hypothetical protein Bphy_1899 2153632 - 2152898 - | metallophosphoesterase TERM 2283 2153561 - 2153520 - G 71 -10.2 -3.64822 | gap 2, overlap 2153558 ACCCTCTCATCGAAA CGGAT-CTTCG-CGAGCTCG ATCT CGAGCGCGGCGAAGCAGCCG TGGATGTCGCCGACG Bphy_1900 2154078 - 2153629 - | hypothetical protein Bphy_1901 2154437 - 2154075 - | hypothetical protein TERM 2284 2154453 - 2154490 + r 70 -4.7 -4.46531 | gap 1, opp_overlap 2154466, overlap 2154454 GCCGCGCTCCCGTAC AGCGCCGACG-AAAGCGA ATC TCGCTTAACGCCGCCGCG TTTGATTTTTTGGTT Bphy_1902 2154982 - 2154434 - | hypothetical protein Bphy_1903 2155512 - 2154982 - | hypothetical protein Bphy_1904 2155688 - 2155509 - | hypothetical protein Bphy_1905 2155902 - 2155672 - | hypothetical protein Bphy_1906 2156918 - 2155899 - | GP60 TERM 2285 2156484 - 2156505 + g 93 -10.9 -4.59117 | overlap 2156500 GGTTACTGACGATTC GGGTGCAAT AGCT GTTGCACCC TTTTGTGCTTCGTTT TERM 2286 2156564 - 2156596 + g 72 -8.6 -4.19371 | gap 1, overlap 2156584 2156589 CTTTCGTGTCGACGT TTGCACCCTTTGCAT CTTC AT-CAATGGGTGCAA TTTCTTCACCCTTTG Bphy_1907 2157226 - 2156915 - | hypothetical protein Bphy_1908 2157476 - 2157240 - | hypothetical protein Bphy_1909 2158201 - 2157806 - | hypothetical protein TERM 2287 2158115 - 2158086 - G 74 -11.3 -3.68529 | overlap 2158088 ACGGCATCACGGAAA GACGCGCACGCAG CGAT CTGCTCGCGCGAC AGAAACTTCGCCGAC TERM 2288 2158113 - 2158088 - G 73 -12.5 -3.42395 | overlap 2158086 GGCATCACGGAAAGA CGCGCACGCAG CGAT CTGCTCGCGCG ACAGAAACTTCGCCG TERM 2289 2158240 - 2158224 - R 90 -2.9 -5.71712 | TCCTATAGAAAAAAA CAACCGG ATT CCAACTG GAATTACGACTCGGT TERM 2290 2158268 - 2158292 + r 83 -14.4 -3.05463 | opp_overlap 2158268, overlap 2158272 GGTCAGCACTTCAAA TGAAGGCGTC TCAAT GACGCCTTCA TTCCATGACCGACCT TERM 2291 2158292 - 2158268 - R 88 -14.4 -3.62096 | opp_overlap 2158268 2158272 GGTCAGCACTTCAAA TGAAGGCGTC TCAAT GACGCCTTCA TTCCATGACCGACCT Bphy_1910 2158614 - 2158306 - | hypothetical protein TERM 2292 2158443 - 2158461 + g 93 -6.7 -5.11033 | gap 1, overlap 2158446 GGTGAGCGATTTTCA CGTCGGCA GGAA TGCCG-CG TTTTTTCCAGTTCTG TERM 2293 2159104 - 2159065 - g 76 -9.2 -4.07568 | opp_overlap 2159088, overlap 2159066 2159080 GCTCGGGCCGCAAAA TCTGACAGCTGAAACGCT GGCA AGCGTCGCAGCCGTCGGT GCCGACGTCGCATCG TERM 2294 2159103 - 2159066 - g 72 -12.7 -3.04398 | opp_overlap 2159088, overlap 2159065 2159080 CTCGGGCCGCAAAAT CTGACAGCTGAAACGCT GGCA AGCGTCGCAGCCGTCGG TGCCGACGTCGCATC TERM 2295 2159518 - 2159507 - g 73 -5.8 -4.35524 | CTTGTAAAGGCAAAA GACG GCCG CGTC ATGGTGAAGGAATTC Bphy_1911 2158679 - 2159674 + | putative phage repressor TERM 2296 2159701 - 2159714 + F 100 -9.5 -5.99154 | opp_overlap 2159701 ACCAAGACGACCAAA CCCGC TATG GCGGG TTTTTTTGTTTCATC TERM 2297 2159714 - 2159701 - f 75 -9.5 -3.8505 | opp_overlap 2159701 ACCAAGACGACCAAA CCCGC TATG GCGGG TTTTTTTGTTTCATC TERM 2298 2159790 - 2159750 - f 83 -5.6 -4.89852 | opp_overlap 2159755, overlap 2159757 CCAGACGCAGAAAAA TTAAACACAGTGTTTGAC ATGCG GTTAAACATGGTGTTTAA TACATCTCAAGCGCT TERM 2299 2159847 - 2159861 + F 74 -6.4 -4.5442 | opp_overlap 2159847, overlap 2159842 GCCCTAAGCTCAGAA CATTGC CGC GCAGTG TTTTGTACTTAGAGC Bphy_1912 2160029 - 2160310 + | hypothetical protein Bphy_1913 2160649 - 2160984 + | hypothetical protein TERM 2300 2161124 - 2161108 - g 71 -4.3 -4.53303 | CAGGTGCACAGAAAA GCCCCCT GCA AGATGGC AAGCCGTTCGTCATC Bphy_1914 2161029 - 2161859 + | hypothetical protein TERM 2301 2161894 - 2161916 + F 75 -5.4 -4.65895 | CCGAGCCAGCGCTTT GAGGGTGCGG TCC CGGCCCTCTC TTTTTGAATCGAAGG Bphy_1915 2162051 - 2162797 + | hypothetical protein TERM 2302 2163030 - 2163054 + G 78 -4.1 -4.77438 | GATCGGCTGCATGGC GGCCACCTGCT ACG GGCACGCGGTC TTTTTCCTCCTGGCT Bphy_1916 2162800 - 2163777 + | hypothetical protein Bphy_1917 2163786 - 2165393 + | C-5 cytosine-specific DNA methylase TERM 2303 2165763 - 2165736 - g 74 -11.4 -3.57561 | gap 1, overlap 2165737 GGCGAAGCGCTGAAA CTCGCGGAGAAAT GCC ATTTCCCCGCG-G CGCGAGATATTCCCG Bphy_1918 2165424 - 2166110 + | hypothetical protein TERM 2304 2166213 - 2166252 + G 74 -12.8 -3.29511 | gap 1, overlap 2166214 ATACGGCTATGGGCA AGTCTGGTG-GCGCGACAG GGA CTGGCGCGCGCACCGGGCG TTCTACACGCATCAC TERM 2305 2166214 - 2166251 + G 81 -16.3 -2.57564 | gap 1, overlap 2166213 TACGGCTATGGGCAA GTCTGGTG-GCGCGACAG GGA CTGGCGCGCGCACCGGGC GTTCTACACGCATCA Bphy_1919 2166112 - 2166621 + | hypothetical protein Bphy_1920 2166618 - 2167139 + | methyltransferase putative Bphy_1921 2167136 - 2167333 + | hypothetical protein TERM 2306 2167584 - 2167559 - g 100 -13.3 -5.26918 | ACAGCGCAGAAAAAA GCCCCGCTTCC AATG GAAAGCGAGGC AAGAACTGCGGGCAT Bphy_1922 2167345 - 2167923 + | hypothetical protein Bphy_1923 2168242 - 2167880 - | hypothetical protein Bphy_1924 2168320 - 2169207 + | Gp37Gp68 family protein Bphy_1925 2169596 - 2169255 - | hypothetical protein Bphy_1926 2169668 - 2169889 + | hypothetical protein TERM 2307 2169931 - 2169918 - g 76 -9.5 -4.10632 | AAATAAAGAGAACAA GGGCC TCCC GGCCC GCTGGCGTCAGATTC Bphy_1927 2169889 - 2170941 + | integrase family protein TERM 2308 2171134 - 2171169 + T 100 -8.4 -5.00616 | gap 1, opp_overlap 2171138 2171139, overlap 2171138 2171139 CGCCAGATTCAATGA CAAAG-CCCCGTAATTC AAT GATTTGCGGGGATTTTG TTTTTTCGACCCACA TERM 2309 2171138 - 2171164 + T 95 -7.2 -5.42198 | opp_overlap 2171138 2171139, overlap 2171134 2171139 AGATTCAATGACAAA GCCCCGTAATTC AAT GATTTGCGGGGA TTTTGTTTTTTCGAC TERM 2310 2171139 - 2171163 + T 77 -10.7 -3.83692 | opp_overlap 2171138 2171139, overlap 2171138 2171134 GATTCAATGACAAAG CCCCGTAATTC AAT GATTTGCGGGG ATTTTGTTTTTTCGA TERM 2311 2171325 - 2171307 - T 100 -13.1 -4.42639 | ATACGCCAATGAAAA GCCGCGC ACGAG GCGCGGC TAACGTTACATGCCC Bphy_1928 2172348 - 2171359 - | hypothetical protein Bphy_1929 2172711 - 2172349 - | hypothetical protein Bphy_1930 2173419 - 2172730 - | hypothetical protein TERM 2312 2173258 - 2173246 - G 81 -4.9 -4.9725 | opp_overlap 2173246 AGCCCGATAGAAAAA GAATT CAC AATTC TTGTCACCCTCGACC Bphy_1931 2174776 - 2173403 - | hypothetical protein Bphy_1932 2177573 - 2174817 - | type VI secretion system Vgr family protein TERM 2313 2176310 - 2176331 + g 93 -6.5 -5.11033 | gap 1, opp_overlap 2176308, overlap 2176328 AGCCCGTCACAATCG CCAC-CTCGC CGT GCGAGCGCGG TTTTTTCGCCTTCTG TERM 2314 2177944 - 2177931 - R 100 -9.5 -5.40474 | overlap 2177933 ACGGGCGTAAAAAAA CCGCC AACC GGCGG TTGCCCGCCTACGAC Bphy_1933 2178348 - 2178022 - | hypothetical protein Bphy_1934 2178765 - 2178361 - | hypothetical protein Bphy_1935 2179197 - 2178970 - | phage transcriptional regulator, AlpA TERM 2315 2179340 - 2179314 - R 80 -10.1 -4.08216 | gap 1, opp_overlap 2179330 2179332, overlap 2179279 TGAGGGCTGCGAAAA GGCCG-CACCGC AATT GCGGTGGCCGCC GCCAACACGGCAAAA Bphy_1936 2181561 - 2179543 - | SSS family solute/sodium (Na+) symporter TERM 2316 2180476 - 2180461 - G 74 -4.7 -4.58308 | opp_overlap 2180464, overlap 2180443 2180445 CAGCAACGAAAGAAA GTTGC GCTGGT GCAAC TGGCGCTCGTCTTCG TERM 2317 2180623 - 2180574 - G 77 -15.9 -2.62184 | gap 3, opp_overlap 2180596, overlap 2180602 GCTGCGCCCACACGA TCTGCGCCGTCGCCGCATCGCGCG GAAAG CGCGCGATGCGGCG-CTG-G-AGA TCGGCGATCTCGCGC TERM 2318 2181118 - 2181102 - G 77 -15.1 -2.9039 | overlap 2181093 ACAGGATCGCAGACA GCGCGGC GAG GCCGCGC ACAGCATTGCTCGAA Bphy_1937 2181923 - 2181558 - | membrane protein TERM 2319 2182054 - 2182030 - R 100 -13.6 -4.72272 | opp_overlap 2182029 2182026 2182024 GCGCTCCATGAAAAA CGGCGCATCC GCAGG AGATGCGCCG CTCATTCTTCTACTC Bphy_1938 2184073 - 2182091 - | acetate--CoA ligase TERM 2320 2182295 - 2182313 + g 82 -16 -3.09492 | CCAGTTGCGCAGATC GGCCGCGA TCT TCGCGGCC TCTTCGCCTTCGGGA Bphy_1939 2184468 - 2185367 + | hypothetical protein TERM 2321 2185342 - 2185392 + F 74 -12.5 -3.01791 | CCAGCCTCAAGGCGC GGCGCGTGCCGCCCGTGGC-GTC CTAGCTT GCCGGCCAAGCGCGGC-CGCGCC TGTTCGCGCCGCGCT TERM 2322 2185462 - 2185450 - f 77 -10.5 -3.7941 | opp_overlap 2185452 CACGCTGTACAATAA CGCGC CCA GCGCG CTCCGCCGGCCGGTT Bphy_1940 2185670 - 2186245 + | hypothetical protein Bphy_1941 2186303 - 2187826 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 2323 2187848 - 2187869 + F 100 -13 -5.95946 | opp_overlap 2187848 TGTTTGTTTAGCGAA GCCGGGAC GTGATA GTCCCGGC TTTTTTTATTGTTCG TERM 2324 2187869 - 2187848 - f 76 -13 -3.05384 | opp_overlap 2187848 TGTTTGTTTAGCGAA GCCGGGAC GTGATA GTCCCGGC TTTTTTTATTGTTCG Bphy_1942 2188000 - 2188476 + | bacterioferritin TERM 2325 2188534 - 2188565 + F 100 -12.3 -4.84914 | ACTTCTGCGGTCCGA TCCGCGCAACGTT CCAGGC AGCGCTGCGCGGA TTTTCTTATATGGCT TERM 2326 2189323 - 2189357 + G 70 -5.5 -4.25104 | gap 1, opp_overlap 2189316 ACCAGCAAGGGCTGC GCTCGCCGG-AGCGCG ATAC CGTGCCGCCGCCGCGC TTTTGCTCGACCAGC Bphy_1943 2188575 - 2189486 + | glutamate racemase Bphy_1944 2189724 - 2189960 + | BFD/(2Fe-2S)-binding domain-containing protein TERM 2327 2189991 - 2190028 + F 95 -6.9 -5.38054 | gap 1, opp_overlap 2189995 2190005 2190006, overlap 2190003 2190004 CTTCCCGCGTTTGAA C-GTAGCGTCCGAAATGG CGC CCGTCTCGGGCGCCGCAG TTTTTCTTTGTGCCG TERM 2328 2190003 - 2190027 + F 72 -9.1 -3.81748 | opp_overlap 2189995 2190005 2190006, overlap 2189991 2190004 GAACGTAGCGTCCGA AATGGCGCCCG TCT CGGGCGCCGCA GTTTTTCTTTGTGCC TERM 2329 2190004 - 2190026 + F 74 -12.6 -2.87964 | opp_overlap 2189995 2190005 2190006, overlap 2190003 2189991 AACGTAGCGTCCGAA ATGGCGCCCG TCT CGGGCGCCGC AGTTTTTCTTTGTGC TERM 2330 2190025 - 2190005 - f 83 -13.9 -3.54543 | opp_overlap 2190004 2190003 2189991, overlap 2189995 2190006 ACGTAGCGTCCGAAA TGGCGCCCG TCT CGGGCGCCG CAGTTTTTCTTTGTG TERM 2331 2190024 - 2190006 - f 89 -17.4 -2.72511 | opp_overlap 2190004 2190003 2189991, overlap 2189995 2190005 CGTAGCGTCCGAAAT GGCGCCCG TCT CGGGCGCC GCAGTTTTTCTTTGT TERM 2332 2190846 - 2190810 - g 75 -3.6 -4.74103 | gap 2, opp_overlap 2190839, overlap 2190826 CGTCGAACTGAAAAA GAGCAGCGGCTACGAACG CCT CGACCAG-GCCGC-GCTC GACGCGATTCGATCC Bphy_1945 2190208 - 2190945 + | TonB family protein Bphy_1946 2190984 - 2191715 + | MotA/TolQ/ExbB proton channel Bphy_1947 2191732 - 2192151 + | biopolymer transport protein ExbD/TolR TERM 2333 2192195 - 2192180 - T 72 -4.6 -4.65916 | overlap 2192181 CTGATTCGAAGAAAA GCCCTG TTTT CAGGGT TCAAAGTAAAAGGCC TERM 2334 2192235 - 2192202 - T 83 -15.5 -2.73124 | opp_overlap 2192207, overlap 2192207 TTTCAGGGTTCAAAG TAAAAGGCCTTCATC GTCG GATGAAGGCCTTTTT TCATGCGCACTCGGC TERM 2335 2192207 - 2192230 + T 100 -15.4 -5.14563 | opp_overlap 2192207 2192202 GGGTTCAAAGTAAAA GGCCTTCATC GTCG GATGAAGGCC TTTTTTCATGCGCAC TERM 2336 2192230 - 2192207 - T 100 -15.4 -4.54727 | opp_overlap 2192207, overlap 2192202 GGGTTCAAAGTAAAA GGCCTTCATC GTCG GATGAAGGCC TTTTTTCATGCGCAC Bphy_1948 2193513 - 2192536 - | LysR family transcriptional regulator TERM 2337 2194104 - 2194063 - g 74 -10.7 -3.78775 | CGCGCTATCAGGAAA TGCCGTCTGCGGGCATCCC CGTC GCGACGTCCGACGACGGCA AGGTGCGAGTCAAGG Bphy_1949 2193636 - 2194508 + | pirin domain-containing protein TERM 2338 2194625 - 2194579 - f 79 -13 -3.21772 | opp_overlap 2194585 2194586 2194590, overlap 2194577 2194580 AATTCGTTCACAATA GCGATTCGA-GCCGCGCGGCGC GTTCT GCGCCGCGCGGCATC-ATCCGT TCCAATCCAATGTCC TERM 2339 2194624 - 2194580 - f 85 -16.5 -2.52742 | opp_overlap 2194585 2194586 2194590, overlap 2194579 2194577 ATTCGTTCACAATAG CGATTCGA-GCCGCGCGGCGC GTTCT GCGCCGCGCGGCATC-ATCCG TTCCAATCCAATGTC TERM 2340 2194585 - 2194620 + F 95 -19 -2.53876 | gap 1, opp_overlap 2194580 2194579 2194577, overlap 2194586 2194590 TTCACAATAGCGATT CGA-GCCGCGCGGCGCG TTC TGCGCCGCGCGGCATCA TCCGTTCCAATCCAA Bphy_1950 2194657 - 2195055 + | OsmC family protein Bphy_1951 2195095 - 2195586 + | hypothetical protein TERM 2341 2195593 - 2195616 + F 70 -12.4 -2.71246 | opp_overlap 2195587, overlap 2195591 2195590 TTGCATTAAGTCCTG CGCTGCCTGA CTCC TCGGGCGGCG TCACTTTCCTTGCCT Bphy_1952 2195728 - 2196009 + | hypothetical protein TERM 2342 2196215 - 2196242 + T 100 -13.5 -4.89567 | opp_overlap 2196211 2196215 AACGATAGAAACGAA GCCGTGCAGGT CCAGCC ATCTGCACGGC TTTTGTCTTTTGCGA TERM 2343 2196242 - 2196215 - T 78 -11.3 -3.66968 | opp_overlap 2196215, overlap 2196211 AACGATAGAAACGAA GCCGTGCAGGT CCAGCC ATCTGCACGGC TTTTGTCTTTTGCGA Bphy_1953 2196694 - 2196287 - | hypothetical protein TERM 2344 2196619 - 2196651 + g 79 -14.9 -3.03007 | gap 1, overlap 2196607 TGACGCTCCAGTGAT TCGCCGCCGCGTGC GCTTCA GCG-GCGGCGGCGA TCTTACGGACGTCTT Bphy_1954 2198141 - 2196732 - | putative nitrogen fixation protein VnfA TERM 2345 2196852 - 2196830 - G 81 -11.2 -4.07687 | overlap 2196831 ACGTGCGCCGCAAAA CCCGCGCCGT ATA ACGGCGCGTA ATGAGCCACGCGAGC TERM 2346 2197597 - 2197581 - G 74 -11.5 -3.6502 | overlap 2197549 2197582 GACCTTGTAGTGAAA CGGCGCG AGG CGCGCCA AAAGCGAAAAAACCC TERM 2347 2197623 - 2197610 - G 100 -9.5 -5.2696 | CCAAAAGCGAAAAAA CCCCG TTGA CGGGG CACAGGTATTTACAC TERM 2348 2198095 - 2198048 - G 93 -17.8 -3.52093 | gap 1, opp_overlap 2198075 2198091 2198094, overlap 2198049 AGACGGCAACGACAA CCCACTGGATGCAGCG-GATGGC AGC GCCGTGGCGCTGCATCCAGTGGC CGACCTCTGCAAGCC TERM 2349 2198094 - 2198049 - G 100 -21.3 -2.70774 | gap 1, opp_overlap 2198075 2198091, overlap 2198048 GACGGCAACGACAAC CCACTGGATGCAGCG-GATGGC AGC GCCGTGGCGCTGCATCCAGTGG CCGACCTCTGCAAGC Bphy_1955 2198983 - 2198138 - | iron permease FTR1 Bphy_1956 2199381 - 2199046 - | hypothetical protein TERM 2350 2199421 - 2199398 - R 93 -11.6 -4.57073 | overlap 2199399 CACCCTTCCTAAAAA TGCGGCGCGC TGTC ACGCGCCGCC GACTGCCGTTGTCAC TERM 2351 2199420 - 2199399 - R 87 -15.1 -3.33922 | overlap 2199398 ACCCTTCCTAAAAAT GCGGCGCGC TGTC ACGCGCCGC CGACTGCCGTTGTCA Bphy_1957 2200017 - 2199469 - | hypothetical protein TERM 2352 2199538 - 2199551 + g 75 -9.5 -3.99678 | opp_overlap 2199538 GATCGGCTTGAACCA CGGGC CCAC GCCCG TTTCCTTGTCGACGT Bphy_1958 2202458 - 2200365 - | excinuclease ABC, B subunit TERM 2353 2200454 - 2200467 + g 72 -3.1 -4.63527 | GCATCTGAGCCGCCT TTTCG AATT CGAGA TTTTTCGCGTGCTCC Bphy_1959 2202837 - 2204036 + | aspartate transaminase TERM 2354 2204104 - 2204086 - T 83 -11.7 -3.81146 | opp_overlap 2204086 TGCTGGAACGAAGAA GGCGCTC CTTAT GAGCGCC TTTTTTCGTGCTGCG TERM 2355 2204086 - 2204104 + T 100 -11.7 -5.1861 | opp_overlap 2204086 TGCTGGAACGAAGAA GGCGCTC CTTAT GAGCGCC TTTTTTCGTGCTGCG Bphy_1960 2205397 - 2204144 - | patatin Bphy_1961 2206217 - 2205420 - | 3-hydroxybutyrate dehydrogenase TERM 2356 2206305 - 2206275 - H 77 -11.9 -3.61178 | gap 1, opp_overlap 2206276 2206280, overlap 2206276 CGCAGGCATCGTAAA GCTGACCGAACGGC ATAT GCCGTTCGGTC-GA TTGCTGCACTGCGGC TERM 2357 2206276 - 2206305 + H 83 -14.3 -3.16564 | opp_overlap 2206275 2206276, overlap 2206280 GCAGGCATCGTAAAG CTGACCGAACGGC ATAT GCCGTTCGGTCGA TTGCTGCACTGCGGC TERM 2358 2206304 - 2206276 - H 83 -15.4 -2.76492 | gap 1, opp_overlap 2206276 2206280, overlap 2206275 GCAGGCATCGTAAAG CTGACCGAACGGC ATAT GCCGTTCGGTC-G ATTGCTGCACTGCGG TERM 2359 2206280 - 2206301 + H 84 -15.9 -2.56914 | opp_overlap 2206276 2206275, overlap 2206276 GCATCGTAAAGCTGA CCGAACGGC ATAT GCCGTTCGG TCGATTGCTGCACTG TERM 2360 2206543 - 2206571 + G 71 -8 -4.15044 | overlap 2206544 GCCGCACGGGAATCG CTGGCGGCCGCG CGCGA CGCGGGCGTCAA TTTCTTCGACAACGC Bphy_1962 2206435 - 2207406 + | aldo/keto reductase TERM 2361 2208149 - 2208136 - g 75 -8.1 -4.23674 | TCCTATGAAGACAAA CGCGA TTAC TCGCG AACCCTGACTTGCGT TERM 2362 2208438 - 2208395 - g 90 -11.6 -4.43208 | gap 1, overlap 2208432 2208433 AGATGTTGAAAGAAA CGCTGCCGTG-GCTCGTCGAG ACA CTCGGCGAGGACAAGGCCGCG CAGTTCAAGATCGAA Bphy_1963 2207623 - 2208468 + | hypothetical protein Bphy_1964 2209513 - 2208479 - | NMT1/THI5-like domain-containing protein Bphy_1965 2210012 - 2209671 - | hypothetical protein TERM 2363 2210154 - 2210139 - R 83 -11.8 -3.91144 | TCCACATGTGACAAA GCCCCG CATG CGGGGC TTGACGTCGCGACTC Bphy_1966 2210362 - 2210216 - | hypothetical protein Bphy_1967 2211069 - 2210644 - | MerR family transcriptional regulator TERM 2364 2211114 - 2211132 + H 79 -13.2 -3.24188 | TTGCATGATTCTTGA CCTTCCCA CTG TGGGAAGG TTAATCATGATATGG Bphy_1968 2211202 - 2211411 + | heavy metal transport/detoxification protein Bphy_1969 2211427 - 2212347 + | dTDP-4-dehydrorhamnose reductase Bphy_1970 2215500 - 2212351 - | DNA polymerase III, alpha subunit TERM 2365 2213524 - 2213505 - G 71 -4.2 -4.56597 | gap 1, opp_overlap 2213507 2213508 2213518, overlap 2213506 2213507 CCTGCTCCTGAAAAA TCGGCACGC CCA GCGTGC-GT TTGAGCGCGATTTTC TERM 2366 2214701 - 2214691 - G 72 -8.2 -4.19817 | opp_overlap 2214694, overlap 2214692 TTGATCGAGCGAAAA CGCG CAG CGCG ACAGCACGCTGATGG Bphy_1971 2216974 - 2215505 - | hypothetical protein Bphy_1972 2217611 - 2216904 - | hypothetical protein TERM 2367 2217205 - 2217178 - GR 74 -11.2 -3.53224 | overlap 2217165 2217179 GACTGCGCGGCCAAA TGCAGGCGCCGC AGCG ACGACGCCTGCG CGTGCTGCGCCCACA TERM 2368 2217204 - 2217179 - GR 80 -14.7 -2.71791 | overlap 2217165 2217178 ACTGCGCGGCCAAAT GCAGGCGCCGC AGCG ACGACGCCTGC GCGTGCTGCGCCCAC TERM 2369 2217248 - 2217228 - GR 73 -11.1 -3.41745 | opp_overlap 2217238 CGCCCACAAGATCAA CGCGCCG CAGGTGC CGGCGCG CAAGATCTGCTCGGC TERM 2370 2217643 - 2217628 - R 72 -6.2 -4.25658 | opp_overlap 2217628, overlap 2217625 AGCGTAGGAAAATAA CTGTAT ATTT ATACAG TATCCTACACGGAAA TERM 2371 2217906 - 2217890 - R 72 -5.8 -4.54553 | GACAAATATAAGAAA GGACGA ATCGA TCGCCC ATGTCATCAGAAGAA TERM 2372 2218035 - 2218000 - R 100 -16.2 -3.86015 | opp_overlap 2218006 CATCGGCCGCACAAA CGCCAAGACCCCGC TTTTGAGG GCGGGGTCTTGGTG ATGGGTAAGGAGCCT TERM 2373 2218006 - 2218029 + r 75 -12.4 -3.22298 | opp_overlap 2218000 CCGCACAAACGCCAA GACCCCGCTT TTGA GGGCGGGGTC TTGGTGATGGGTAAG TERM 2374 2220686 - 2220697 + r 71 -7.2 -4.2354 | AGGATCTGTTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC Bphy_1973 2224928 - 2223780 - | hypothetical protein TERM 2375 2224186 - 2224167 - G 100 -2.8 -5.96219 | overlap 2224185 CACCGACAAAAAAAA CGTCGC GAGCCCGA GCAACG CCGGCGCGGGCACAC TERM 2376 2225637 - 2225609 - g 76 -13.8 -3.14132 | overlap 2225589 CGCCTCGCGCAGCAA CTGGCGCAGGCG GCCGT CGCCGGCGCCAA CGCGAAGATCAATTT Bphy_1974 2225120 - 2226334 + | hypothetical protein TERM 2377 2226366 - 2226384 + F 100 -13.1 -5.61596 | opp_overlap 2226365 2226362 TCTGTATCGAATCAG GCCCCGC CGCGC GCGGGGC TTTTTTTATGGCACT Bphy_1975 2226533 - 2227414 + | two component LuxR family transcriptional regulator Bphy_1976 2227508 - 2228182 + | hypothetical protein TERM 2378 2228998 - 2228980 - g 79 -2.2 -5.06414 | overlap 2228953 2228950 2228982 2228990 GTCGGGCAACAAAAA GTCGGGCA AAT CGTCCGGC AAGGCCGTGACGACC TERM 2379 2229011 - 2228990 - g 74 -10.9 -3.5771 | gap 1, overlap 2228982 2228980 2228953 2228950 AAAAAGTCGGGCAAA TCGTC-CGGC AAG GCCGTGACGA CCAAGAGCAGCAGCA Bphy_1977 2228399 - 2229058 + | hypothetical protein TERM 2380 2229113 - 2229141 + T 100 -11.7 -4.63184 | opp_overlap 2229114, overlap 2229114 CGCATGATCAACAAA ACGAGGCCACG CATTCCA CGTGGCCTCGC TTTTTCGCATACCTT TERM 2381 2229140 - 2229114 - T 100 -16.6 -4.73613 | opp_overlap 2229114 2229113 GCATGATCAACAAAA CGAGGCCACGCA TTC CACGTGGCCTCG CTTTTTCGCATACCT TERM 2382 2229114 - 2229140 + T 87 -15.2 -3.37188 | opp_overlap 2229114, overlap 2229113 GCATGATCAACAAAA CGAGGCCACG CATTCCA CGTGGCCTCG CTTTTTCGCATACCT Bphy_1978 2230357 - 2229191 - | peptidase M14 carboxypeptidase A Bphy_1979 2231169 - 2230387 - | hypothetical protein TERM 2383 2230669 - 2230681 + g 80 -4.7 -4.80853 | GCAATTGATCAGCAC GCGCG AGC CGCCC TTCTTTTTTTCCAGT TERM 2384 2231494 - 2231454 - g 88 -15.4 -3.31144 | gap 1, opp_overlap 2231460, overlap 2231469 TCCGCAGTTCGAGAA GCGCG-CCGTCGACAAGGC CGCT GCGCTGGCGACGGTCGCGC GCCTCTCGACGTTCG Bphy_1980 2231227 - 2231742 + | hypothetical protein Bphy_1981 2231820 - 2233010 + | aminotransferase class I and II Bphy_1982 2233764 - 2233117 - | glutathione S-transferase domain-containing protein Bphy_1983 2233897 - 2235477 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 2385 2235783 - 2235823 + G 88 -9.6 -4.66163 | gap 1 CAGGCGTCGTCGAAG CCGGTAATCGCTGCCGTCG AAGG CG-CGGCGGCGGGTGCAGG TTTTTCGCTGGCGCT TERM 2386 2236163 - 2236184 + G 79 -10.9 -3.89822 | gap 1, opp_overlap 2236123, overlap 2236125 GTCGCTGCCCGATCA GCTCGTCGCG GAG CGCGAC-AGC TTTGTCGCGTCGCTG Bphy_1984 2235477 - 2236265 + | enoyl-CoA hydratase/isomerase Bphy_1985 2236262 - 2236984 + | phosphoglycerate mutase Bphy_1986 2237018 - 2238124 + | aminoglycoside phosphotransferase Bphy_1987 2238198 - 2239436 + | acyl-CoA dehydrogenase domain-containing protein TERM 2387 2240028 - 2240016 - g 76 -6.2 -4.50193 | overlap 2240007 ACGAACGAAGCAAAA CGCC TCTAC GGCG TGATAGATACGCAAC TERM 2388 2240212 - 2240179 - g 75 -7.3 -4.24342 | gap 1, overlap 2240180 GCTGGCACGAAGAAA TCGCCGCGCGCCCCGC CGT GCAACGCG-GCGTCGA AGTGCTGGCGTCGGC Bphy_1988 2239596 - 2240297 + | glutathione S-transferase domain-containing protein Bphy_1989 2240812 - 2240336 - | dehydratase Bphy_1990 2241267 - 2240809 - | dehydratase Bphy_1991 2242428 - 2241301 - | acyl-CoA dehydrogenase domain-containing protein Bphy_1992 2243635 - 2242439 - | acyl-CoA dehydrogenase domain-containing protein TERM 2389 2243071 - 2243093 + g 81 -7.7 -4.57073 | TTTTCATGTCGATCA GCAGGAACG AAATG CCTTCCTGC TTTTTCGCGCCGCTG Bphy_1993 2244134 - 2243691 - | hypothetical protein TERM 2390 2244346 - 2244314 - R 100 -14.2 -4.63527 | opp_overlap 2244321 2244343, overlap 2244315 CCACGAGCGCAAAAA GCGAAAACGGCAGC GCAAG GCTGCCGTTCTCGT TCGACACCGAACGGT TERM 2391 2244345 - 2244315 - R 93 -17.7 -3.37634 | opp_overlap 2244321 2244343, overlap 2244314 CACGAGCGCAAAAAG CGAAAACGGCAGC GCAAG GCTGCCGTTCTCG TTCGACACCGAACGG TERM 2392 2244321 - 2244339 + r 77 -11.7 -3.50853 | opp_overlap 2244315 2244314 CGCAAAAAGCGAAAA CGGCAGC GCAAG GCTGCCG TTCTCGTTCGACACC Bphy_1994 2244965 - 2244375 - | NUDIX hydrolase TERM 2393 2245014 - 2244988 - R 70 -12.3 -2.83403 | gap 1, opp_overlap 2244988 2244987, overlap 2244987 2245005 CCCTTTGCAGCAAAG GGCGC-GACGGC CGAA ACCGTCAGCGCC GTTTGACGAGATATT Bphy_1995 2245303 - 2245007 - | hypothetical protein Bphy_1996 2246781 - 2245303 - | proton-translocating NADH-quinone oxidoreductase, chain N Bphy_1997 2248300 - 2246807 - | proton-translocating NADH-quinone oxidoreductase, chain M Bphy_1998 2250392 - 2248323 - | proton-translocating NADH-quinone oxidoreductase, chain L Bphy_1999 2250716 - 2250411 - | NADH-ubiquinone oxidoreductase chain 4L Bphy_2000 2251404 - 2250736 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TERM 2394 2251483 - 2251514 + r 70 -12.2 -2.82015 | gap 1, overlap 2251500 TTGTGTTGCTCGACG CCGCGCCGGAGCGGT CTG GCTGCGCCG-CGCGG TCTCATGCCTGTCAG Bphy_2001 2252052 - 2251564 - | NADH-quinone oxidoreductase, chain I Bphy_2002 2253131 - 2252067 - | NADH dehydrogenase (quinone) Bphy_2003 2255465 - 2253132 - | NADH-quinone oxidoreductase, chain G Bphy_2004 2256889 - 2255561 - | NADH-quinone oxidoreductase, F subunit Bphy_2005 2257371 - 2256886 - | NADH-quinone oxidoreductase, E subunit Bphy_2006 2258795 - 2257542 - | NADH dehydrogenase I, D subunit Bphy_2007 2259407 - 2258805 - | NADH (or F420H2) dehydrogenase, subunit C Bphy_2008 2259905 - 2259426 - | NADH-quinone oxidoreductase, B subunit Bphy_2009 2260339 - 2259968 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 TERM 2395 2260050 - 2260036 - G 79 -4.3 -4.91511 | ATTCGAGCAGAAAAA TCATC ATCGA GATGA AGCCGGGCCAGCCGA TERM 2396 2260192 - 2260208 + g 70 -5.8 -4.23999 | opp_overlap 2260160, overlap 2260191 CGAAAGCTTCGAAGC CGCACT CATAC GGTGCG TTCTTTTCGGTGTCC TERM 2397 2260488 - 2260458 - R 74 -7.5 -4.3208 | gap 1, opp_overlap 2260458 CCCCAGAAGTGAAAA TGCCAGCCG-AAGC TGAA GCAAGCGGCTGGCA TTAGATAACATTGGT TERM 2398 2260684 - 2260696 + r 70 -4.9 -4.41616 | CAACGCACAAACGTG TTTTC CTC GAAAA TTTATTTCGGCACGT Bphy_2010 2261090 - 2260698 - | preprotein translocase, SecG subunit Bphy_2011 2261956 - 2261177 - | Triose-phosphate isomerase TERM 2399 2262122 - 2262103 - R 85 -11.4 -3.98173 | TCAAACTCAATTAAA CGAGCGCT GTCA AGCGCCCG CGCCCCAATTCAGCA Bphy_2012 2263128 - 2262112 - | PIG3 family NAD(P)H quinone oxidoreductase TERM 2400 2262761 - 2262726 - G 72 -3.3 -4.59773 | gap 1 TTGCACGGTCAAAAA CATTGCTCCAGACCGT GAAGA ACGTTTCGG-GCAATG CCGCCGCTTCGATAT TERM 2401 2263240 - 2263212 - R 100 -16 -4.80882 | gap 1, opp_overlap 2263206 ACCCTACATGAAAAA CGGCCGGC-GCGC TTTT GCGCTACCGGCCG TCCCGCTTTCACCGC Bphy_2013 2265395 - 2263257 - | polyribonucleotide nucleotidyltransferase TERM 2402 2265316 - 2265331 + g 77 -11.8 -3.64703 | overlap 2265305 2265304 2265330 GCACCGCTCGCCTGG CGGGCG ATTT CGCCCG TTTCCATGCGAACCG TERM 2403 2265684 - 2265646 - R 100 -18.4 -4.58395 | opp_overlap 2265649 2265651, overlap 2265651 CGCACCGTTGAAAAA CAAAATGCCTGTATCAGC GGA ACTGACACAGGCATCTTG CTGACAGAAAGTCCG TERM 2404 2265651 - 2265679 + r 73 -11.8 -3.13403 | opp_overlap 2265646 2265651, overlap 2265649 CGTTGAAAAACAAAA TGCCTGTATCAG CGGAA CTGACACAGGCA TCTTGCTGACAGAAA TERM 2405 2265679 - 2265651 - R 100 -14.7 -5.26119 | opp_overlap 2265651 2265649, overlap 2265646 CGTTGAAAAACAAAA TGCCTGTATCAGC GGA ACTGACACAGGCA TCTTGCTGACAGAAA Bphy_2014 2265979 - 2265710 - | ribosomal protein S15 Bphy_2015 2267418 - 2266147 - | branched chain amino acid ABC transporter periplasmic ligand-binding protein Bphy_2016 2267600 - 2268124 + | putative lipoprotein TERM 2406 2268217 - 2268204 - T 100 -9.5 -4.93296 | opp_overlap 2268204 CGACGACGATAAAAA CCCGC CATT GCGGG TTTTTTATCGCGGCC TERM 2407 2268204 - 2268217 + T 100 -9.5 -5.24129 | opp_overlap 2268204 CGACGACGATAAAAA CCCGC CATT GCGGG TTTTTTATCGCGGCC Bphy_2017 2269801 - 2268251 - | 2-isopropylmalate synthase TERM 2408 2270025 - 2270045 + r 74 -2.6 -4.88293 | overlap 2270021 GACTATAGCGGCAAT CCTGAATT CGTGC AATTGAGG TTTGTTTTTGCCCTT Bphy_2018 2271135 - 2270263 - | CDP-diacylglycerol--serine O-phosphatidyltransferase Bphy_2019 2271794 - 2271156 - | phosphatidylserine decarboxylase related protein TERM 2409 2271837 - 2271866 + r 90 -10 -4.62471 | gap 1, opp_overlap 2271837 CGTAGGATAGCAAAA GCCGCCCAGG-GT TCAGC ACACCTGGACGGC TTTTTGAGGCTTCCG TERM 2410 2271866 - 2271837 - R 93 -12.2 -4.371 | gap 1, opp_overlap 2271837 CGTAGGATAGCAAAA GCCGCCCAGG-GT TCAGC ACACCTGGACGGC TTTTTGAGGCTTCCG Bphy_2020 2272935 - 2271919 - | ketol-acid reductoisomerase TERM 2411 2272451 - 2272467 + g 75 -7.9 -4.27117 | opp_overlap 2272443 TACGACAGCGCGATG TCGCGCG CTG CGCCCGA TTTGTCTTGTGCAAC Bphy_2021 2273526 - 2273035 - | acetolactate synthase, small subunit Bphy_2022 2275395 - 2273638 - | acetolactate synthase, large subunit, biosynthetic type TERM 2412 2275699 - 2275711 + H 79 -6.9 -4.57569 | overlap 2275700 AGGCTGGATGCAAGG TGCGG GTG CCGCG TTTTTCCCCGGATCG TERM 2413 2275960 - 2275978 + G 83 -5.8 -4.87803 | overlap 2275961 AAATACGGCGATCGT CCGGCTGC TGA GCTGCCGC TTTTGTTTCAGCGTA TERM 2414 2276220 - 2276206 - g 78 -4.2 -4.82855 | GACGAAATCCAAAAA TTGCCG GCA CGTCAA CGGGAGGCGTTTCTG Bphy_2023 2275810 - 2276373 + | ECF subfamily RNA polymerase sigma-24 factor TERM 2415 2276541 - 2276510 - g 71 -10 -3.61398 | opp_overlap 2276504 2276519 2276523 CCTCGCTCGCAAGAA GCCCGAAGCCGTGC AGGC GCCCGTCTTCGCGC CCGTGTTCGTCGGCG Bphy_2024 2276370 - 2276801 + | hypothetical protein TERM 2416 2277261 - 2277241 - g 73 -12.5 -3.34013 | CAGGTGTCGAAGGAA CTGCCGCGC GAG GCGCGCCAG AGCGCGTGGAAGGCG TERM 2417 2277325 - 2277309 - g 71 -10.1 -3.61812 | overlap 2277303 AGAACAGAAGCAGAA GCTCGCC GCC AGCGAGC ACAAGCGGCGGCCGA TERM 2418 2277358 - 2277330 - g 70 -11 -3.4252 | gap 1, overlap 2277303 CGCCAGCGAGCACAA GCGGCG-GCCGAC CGTC GTCAGCGCACCGC CGTCGGGCAAATCCG TERM 2419 2277497 - 2277509 + G 71 -9.1 -3.73224 | GCGCGCCCGCGATTC CTGCC GCC GGCAG TTTCGTGCCGGCTAC Bphy_2025 2276818 - 2277576 + | putative transmembrane protein Bphy_2026 2277634 - 2278167 + | RDD domain-containing protein TERM 2420 2278219 - 2278229 + F 87 -8.2 -4.81851 | overlap 2278211 2278206 TGCCGCGCGTCGATG CCGG TTT CCGG TTTTTCGCTTTCACT TERM 2421 2279412 - 2279386 - g 70 -13.7 -2.5194 | gap 1, opp_overlap 2279388, overlap 2279385 TAATGACGGACGAAG CG-CGCCGCCGC GGCT GCGACGGCGTCG TGTGCGGGCATATTC Bphy_2027 2278656 - 2279603 + | metallophosphoesterase Bphy_2028 2279638 - 2280669 + | glycosyl transferase group 1 TERM 2422 2281156 - 2281172 + G 75 -2.9 -4.84359 | GACGTTGGCTGCGAT TCTCGTG CCG TGCGGGA TTTTTGTGCCCGTCG TERM 2423 2281329 - 2281349 + G 100 -8.9 -5.07275 | opp_overlap 2281321 CCAAGGATCTCGGCA GTGCGGCCG TGA TGGTCGCGC TTTTTATCTGTGTGA Bphy_2029 2280899 - 2281426 + | diacylglycerol kinase TERM 2424 2281619 - 2281600 - f 77 -10.6 -3.85698 | overlap 2281573 CGCGCGCCGCACAAA CGGGCGTG TCAA CCCGCCCG TCAACCCCCCTGGGC Bphy_2030 2281643 - 2282359 + | TetR family transcriptional regulator Bphy_2031 2282362 - 2282946 + | hypothetical protein TERM 2425 2283132 - 2283114 - g 79 -5.8 -4.64861 | overlap 2283098 2283115 2283116 CGGCCGCAAAAGAAA CGGCCGCC GAA GTCGGACG TGCGGGCGGGCACGC Bphy_2032 2282987 - 2283733 + | short-chain dehydrogenase/reductase SDR TERM 2426 2283757 - 2283805 + F 88 -10.2 -4.55887 | gap 1, opp_overlap 2283767 2283768, overlap 2283758 TCTTCCCTCTTCCTT CCCCGCAGAATGCACGGCGCTTC GTCA GAAGCGGCGTGCGT-CAGCGCGC TTTCTCTTTTTCGCG TERM 2427 2283758 - 2283804 + F 82 -13.7 -3.32448 | gap 1, opp_overlap 2283767 2283768, overlap 2283757 CTTCCCTCTTCCTTC CCCGCAGAATGCACGGCGCTTC GTCA GAAGCGGCGTGCGT-CAGCGCG CTTTCTCTTTTTCGC TERM 2428 2283796 - 2283767 - f 75 -12.1 -3.28712 | opp_overlap 2283758 2283757, overlap 2283768 TCCTTCCCCGCAGAA TGCACGGCGCTTC GTCA GAAGCGGCGTGCG TCAGCGCGCTTTCTC TERM 2429 2283795 - 2283768 - f 81 -15.6 -2.57132 | opp_overlap 2283758 2283757, overlap 2283767 CCTTCCCCGCAGAAT GCACGGCGCTTC GTCA GAAGCGGCGTGC GTCAGCGCGCTTTCT TERM 2430 2284604 - 2284622 + G 71 -8 -4.11371 | overlap 2284593 GGACGTCGCGCTAAT GGCGGGCG CCG CGCTCGGC TTTTGCGGACTGTTC Bphy_2033 2283990 - 2285936 + | hypothetical protein Bphy_2034 2286594 - 2285959 - | hypothetical protein TERM 2431 2286605 - 2286628 + r 83 -4.4 -5.10163 | gap 1, opp_overlap 2286599, overlap 2286616 CTCATGCAAGCTCCA GCACGAGC-CG CCG CGTGCGCGCGC TTTTCTTTTCGAGTT Bphy_2035 2287322 - 2286591 - | threonyl/alanyl tRNA synthetase SAD TERM 2432 2287661 - 2287678 + r 74 -6.3 -4.4715 | opp_overlap 2287661 CTATCATGCAATGTA CTCTGCA TTTA TGTAGAG TTTTCTACCTTACCA Bphy_2037 2288993 - 2288052 - | copper resistance D domain-containing protein Bphy_2038 2289367 - 2288993 - | copper resistance protein CopC Bphy_2039 2289774 - 2289427 - | hypothetical protein Bphy_2040 2291135 - 2289840 - | multicopper oxidase type 3 Bphy_2041 2292643 - 2291138 - | outer membrane efflux protein TERM 2433 2291785 - 2291804 + g 72 -8.6 -4.18018 | gap 1 GTGTTCTCAGTTTCG CCGCCT-GA ATA TCGAGGCGG TTTTGCATCGCAAAG Bphy_2042 2292933 - 2292640 - | hypothetical protein Bphy_2043 2293413 - 2293021 - | hypothetical protein Bphy_2044 2293699 - 2294919 + | permease Bphy_2045 2294942 - 2295340 + | hypothetical protein Bphy_2046 2296076 - 2296738 + | LemA family protein Bphy_2047 2296735 - 2297586 + | hypothetical protein Bphy_2048 2297583 - 2298086 + | hypothetical protein Bphy_2049 2298754 - 2298329 - | globin TERM 2434 2298703 - 2298665 - G 81 -10.9 -4.10161 | gap 1, opp_overlap 2298680 CATCAGGTCGTAAAA GCGGTCGACGAGTTCGCG CACG CGCGC-CTCGCCGCCCAC GAGTTCGAAGGCGGT Bphy_2050 2301411 - 2298799 - | hypothetical protein TERM 2435 2299991 - 2299946 - G 88 -9.5 -4.66163 | gap 1, overlap 2299948 ATGCCGATGGAAAAA CGCTCGCTGCGC-ACGATGCGC GCC GCGCCCCACAGCGCCGCACGCG CGATCAGCGCGAACA TERM 2436 2300914 - 2300951 + g 76 -14.2 -3.14878 | gap 1, overlap 2300912 GGACGGCGGAATGCC TCGCACTTCGCGATCGG GTGCG CCGGACGCG-AGTGCGA TCTTCAATTCGCCGC Bphy_2051 2302019 - 2301408 - | putative transmembrane protein TERM 2437 2302170 - 2302192 + r 82 -9.1 -4.5366 | TCCGTCTCATTATAG CTAGCCCGC GTGGG GTGGGCTGG TTTTGGGTTTTTTGG TERM 2438 2302312 - 2302299 - R 79 -5.9 -4.86731 | overlap 2302300 2302302 2302303 CCGCGGCAAAGAAAA GCAGC GGCG GCCGC GTACAGCGGCAACGC TERM 2439 2302401 - 2302381 - R 81 -3.2 -5.29846 | gap 1, overlap 2302382 2302384 AAGCCCAAAGAAAAA CCAGACGCG GGAC CGCGTC-GC ACACAAAACCCGTTA Bphy_2052 2302734 - 2302414 - | small multidrug resistance protein Bphy_2053 2303581 - 2302883 - | two component transcriptional regulator Bphy_2054 2306427 - 2303578 - | osmosensitive K+ channel signal transduction histidine kinase TERM 2440 2303726 - 2303765 + g 100 -17.8 -4.08767 | opp_overlap 2303717 2303718 CAGAAACGCGCGCCC TCGACGCGGCCATCGGCA GCGA TGCGGTTGGCCGCGCCGA TTTTACCGCCATGCG TERM 2441 2306358 - 2306370 + g 93 -3.3 -5.34365 | overlap 2306359 AGAAGATCTTGAGCT TGCCG CGC TGGCG TTTTTCTTCTTCTCG TERM 2442 2307204 - 2307165 - R 89 -4.3 -5.60864 | gap 2, overlap 2307168 2307172 2307173 CAGACATCAAAAAAA GCATTAACCTCGCTGCGCG TCAT CGAGC-GCGAGATTGA-GC TCAAGTACATTCACC Bphy_2055 2307749 - 2307168 - | potassium-transporting ATPase, C subunit Bphy_2056 2309888 - 2307804 - | K+-transporting ATPase, B subunit Bphy_2057 2311751 - 2309946 - | potassium-transporting ATPase, A subunit TERM 2443 2311770 - 2311722 - G 75 -3.2 -4.78107 | CACGACGATGAAAAA TGCCGGCTGCAGGACATTG-TTGA GGC TCATTCAATGTCCTCC-GCGCGCA GCAGCGCATAGACGA Bphy_2058 2311840 - 2311748 - | K+-transporting ATPase, F subunit Bphy_2059 2311950 - 2311840 - | hypothetical protein TERM 2444 2311930 - 2311920 - G 74 -2.4 -4.7373 | overlap 2311903 TCAGCGCAGCAAAAA GCGC GAT GCCC CCGACGTACAGCACA TERM 2445 2312103 - 2312045 - R 83 -5.1 -5.05782 | gap 1, opp_overlap 2312046 2312060, overlap 2312056 2312057 AGTGAGTGTAAAAAA CCCGTAAACAACCGAGGGAGCCGCCGGC TGCC ACCGGTGGCTCCCTCGTCTACGCGCAG- TATTGATGTGCAGTC TERM 2446 2312093 - 2312056 - R 100 -19.1 -3.95674 | opp_overlap 2312046 2312060, overlap 2312045 2312057 AAAACCCGTAAACAA CCGAGGGAGCCGCCGGC TGCC ACCGGTGGCTCCCTCGT CTACGCGCAGTATTG TERM 2447 2312092 - 2312057 - R 100 -22.6 -2.9632 | opp_overlap 2312046 2312060, overlap 2312056 2312045 AAACCCGTAAACAAC CGAGGGAGCCGCCGGC TGCC ACCGGTGGCTCCCTCG TCTACGCGCAGTATT TERM 2448 2312060 - 2312089 + r 95 -18.6 -2.62263 | opp_overlap 2312057 2312056 2312045, overlap 2312046 CCCGTAAACAACCGA GGGAGCCGCCGG CTGCCA CCGGTGGCTCCC TCGTCTACGCGCAGT Bphy_2060 2313153 - 2312179 - | alcohol dehydrogenase Bphy_2061 2313607 - 2313218 - | methylglyoxal synthase Bphy_2062 2314458 - 2313679 - | short-chain dehydrogenase/reductase SDR TERM 2449 2314415 - 2314434 + g 70 -6.3 -4.26903 | overlap 2314416 CCCAGCCCCTTGCTC GCCGCGC ACACGA GCGCGGA TTTTCCTGCGATGCC TERM 2450 2315210 - 2315222 + G 85 -7.7 -4.60487 | overlap 2315181 CCGCGGCGTCGCGGG CGAGA ACA TCTCG TTTTTGGCGCTCGTG Bphy_2063 2314737 - 2315387 + | uracil phosphoribosyltransferase TERM 2451 2315400 - 2315418 + F 85 -3.1 -5.40072 | gap 1 TAAGGTTTGCACCAT CGG-GACG CGGG CGTTGCCG TTTTTTTGGGGGGCG Bphy_2064 2315752 - 2316480 + | hypothetical protein TERM 2452 2316615 - 2316631 + F 78 -6.5 -4.56597 | CATGGCGCATACATG GCCGC ATGGTTC GCGGC TTTTTCCGCCACAAC TERM 2453 2316707 - 2316744 + F 87 -7.5 -4.87626 | overlap 2316708 CGAAGGTAAAGATGG ACATCCACGGCTCGCGC CAGT GCGCGGGCCGTTCACGG TTTTTAGTATTCGGG TERM 2454 2316708 - 2316743 + F 74 -11 -3.51853 | overlap 2316707 GAAGGTAAAGATGGA CATCCACGGCTCGCGC CAGT GCGCGGGCCGTTCACG GTTTTTAGTATTCGG Bphy_2065 2316767 - 2318044 + | phosphoribosylamine--glycine ligase Bphy_2066 2318306 - 2319238 + | coproporphyrinogen oxidase Bphy_2067 2319245 - 2320006 + | nicotinate (nicotinamide) nucleotide adenylyltransferase Bphy_2068 2320009 - 2320467 + | iojap-like protein Bphy_2069 2320535 - 2321005 + | hypothetical protein TERM 2455 2321073 - 2321056 - f 79 -12.7 -3.28924 | opp_overlap 2321064 CATCCCTGCGCACAA CCTGGCC GGAT GGCCAGG TGCGCGCCGCCCTTC Bphy_2070 2321166 - 2321792 + | maf protein TERM 2456 2322444 - 2322467 + G 81 -12.4 -3.85698 | overlap 2322445 TATCAGGATCTGAAT CTCGCGCAGC GCGT GCTGCGCGAC TTTGTCAACGACGAG TERM 2457 2322445 - 2322466 + G 80 -15.9 -2.91276 | overlap 2322444 ATCAGGATCTGAATC TCGCGCAGC GCGT GCTGCGCGA CTTTGTCAACGACGA TERM 2458 2322888 - 2322860 - g 77 -13.1 -3.39803 | CATCGACATGGAGAA CTCCGAGCATCGG GAT CAGGTGCTCGGAG AACTGAAGAAGGCGC TERM 2459 2322996 - 2322974 - g 71 -10.5 -3.65353 | opp_overlap 2322973, overlap 2322964 2322967 CGAAATGACGCGAAA GCGCACGCG TGAAT CGCTTGCGC ATGTGCTGTGCGAGC Bphy_2071 2321802 - 2323271 + | ribonuclease Bphy_2072 2323348 - 2323536 + | hypothetical protein Bphy_2073 2323738 - 2323899 + | hypothetical protein Bphy_2074 2324026 - 2324322 + | hypothetical protein Bphy_2075 2325604 - 2324306 - | O-antigen polymerase TERM 2460 2325099 - 2325089 - G 74 -4.6 -4.53303 | CAGCGCCAGATAAAA CAGC AGC GCCG TCATGATGCCTGCCG TERM 2461 2325672 - 2325697 + r 85 -9.6 -4.4727 | overlap 2325670 GCTCGCTGCGTCAGT GGCGCCTGCC TCTTTC GGCCGGTGCC TTTTGTCGATCTTGC Bphy_2076 2326826 - 2325852 - | glycosyl transferase group 1 TERM 2462 2326365 - 2326347 - G 76 -13.8 -3.06183 | CGTATCGCGACTCAA GCGGCCGA CGA CCGGCCGC GCATGCGCTGCATGC TERM 2463 2326647 - 2326629 - G 82 -16 -3.12449 | opp_overlap 2326624 2326635, overlap 2326625 2326623 GCCGACGAACACATA CGTGCCGC CGT GCGGCACG CTCGCCTTGTGCGGC TERM 2464 2326880 - 2326910 + r 84 -12.6 -3.64466 | gap 2 TGGCAGCGGCGGGTG CGCCCGCATGCGGC GCTGG GCCGC--GCGGGCG TTCTCTCTATCGGAT Bphy_2077 2328735 - 2326942 - | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA TERM 2465 2329153 - 2329116 - g 100 -12 -4.78107 | gap 1, overlap 2329118 2329138 CATCATCACGAAAAA CG-CGGCGCTCAGGC TCGACGAAT GCCTGCGCGCCGTCG CGTTCGCCGACGAGA TERM 2466 2329298 - 2329278 - g 100 -9.6 -5.40072 | opp_overlap 2329283 CGGTCCGCAAAAAAA CCGTGCGC TGGAC GCGCTCGG CACGACCTGGGTGCT Bphy_2078 2329075 - 2329842 + | glycosyl transferase family protein Bphy_2079 2333446 - 2329883 - | DNA polymerase III, alpha subunit TERM 2467 2329936 - 2329916 - G 72 -8.2 -4.07568 | opp_overlap 2329916 CGCGCTGCCCGAAAA CTCGCGGC GCAAT GCGGCGAG CAGTTCGTCCGTCGG TERM 2468 2330111 - 2330091 - G 81 -13.9 -3.53444 | opp_overlap 2330083 CCATTGCCGCCGAAA CCGCCGCGG GCA CCGCTGCGG GGAGCCGGCGCAGCG TERM 2469 2330870 - 2330889 + g 72 -6.4 -4.20783 | overlap 2330877 ATCGACGAACGGGCC TTCTTCGC GCGC GCGCAGAA TTTCTTCGATCGCGT TERM 2470 2331650 - 2331683 + g 73 -5.9 -4.43477 | gap 1, opp_overlap 2331644 2331645, overlap 2331652 GATCGAGAACGCCGC CGGGTCG-TCGAGCGG CAC CTGTGCGAGCGACCAG TTTTCCTTCGATGGA TERM 2471 2333059 - 2333085 + g 74 -11.5 -3.66178 | gap 1, overlap 2333058 GCGCCAGCAGTCCTT CGGCGAGGC-CG CTTT CGAGCCACGCCG TTTCCACTTCCGCGC TERM 2472 2333697 - 2333712 + G 81 -11.8 -3.91897 | CCGCCCTCCATGCGC GCGCCG GGCA CGGCGC TTTATCGCTGGACCA TERM 2473 2334054 - 2334039 - g 77 -8.2 -4.27441 | ATCACGATGAAGAAA CCGGCC ATCA AGCCGG AACTGGGCCGTGCGC Bphy_2080 2333631 - 2334614 + | rhodanese domain-containing protein Bphy_2081 2334689 - 2335573 + | glutamate--tRNA ligase TERM 2474 2335611 - 2335589 - T 80 -9.8 -4.15044 | overlap 2335574 2335591 CGCCGCGCCAACAAA GATGGCGCCC GAA AGGCGCCATT CGCAAAAGCAATCAG TERM 2475 2335609 - 2335591 - T 81 -12.4 -3.6761 | overlap 2335574 2335589 CCGCGCCAACAAAGA TGGCGCCC GAA AGGCGCCA TTCGCAAAAGCAATC Bphy_2082 2337094 - 2335646 - | DEAD/DEAH box helicase domain-containing protein TERM 2476 2335817 - 2335797 - G 73 -6.1 -4.44667 | GGCTTGAAGAAGAAA TCGTCGACA GGC TGCTGACGA TGATGCGAGCCATGT TERM 2477 2337157 - 2337113 - R 72 -4.8 -4.56597 | gap 1, opp_overlap 2337118, overlap 2337114 2337148 2337149 GGCTTTCGCTAAAAA TGCGCCTGCGCTCGG-ACCGC TTGC GCGTTGCCAAAGGCGGGCGCG CGGGCGTCCGCTCAA Bphy_2083 2338990 - 2337554 - | aldehyde dehydrogenase TERM 2478 2338422 - 2338459 + g 72 -11.1 -3.53012 | opp_overlap 2338389 TGCGCGAGCACCTCG CCGATGATCAGCGCGCC GACG GGCGTGCGGCTCGCCGG TTTCAGCACGAACGG TERM 2479 2338698 - 2338680 - G 73 -13.8 -2.81312 | opp_overlap 2338678 2338684 2338691 AACGTATCGATCAGA CGCGCGAC CTC GCCGCGCG AATCGTTGATCGGCT Bphy_2084 2340725 - 2339073 - | thiamine pyrophosphate binding domain-containing protein Bphy_2085 2341356 - 2340976 - | hypothetical protein Bphy_2086 2341613 - 2341425 - | hypothetical protein Bphy_2087 2342871 - 2341657 - | phosphoribosylglycinamide formyltransferase 2 TERM 2480 2341825 - 2341788 - G 79 -14.7 -3.01712 | opp_overlap 2341803, overlap 2341768 CGGGCTTGCCGAACA GGCGCAGATCCGCGCCG GGCA CGGCGAGCGCCTGCGCC ACGCCCTCGAACGCG Bphy_2088 2343184 - 2343777 + | protein of unknown function DUF306 Meta and HslJ TERM 2481 2344434 - 2344420 - g 72 -12.8 -3.12895 | overlap 2344418 2344416 CCTTCCACGAAGACA CGCGGC ACG GCCGCG GCTGCGGCCCCCGCC TERM 2482 2345005 - 2344969 - g 73 -12.2 -3.33815 | gap 1 ACGCGCGTCAATCAA CCGGCACAGCCTGCCGC CCCG GCGGCGAGC-GTGCAGG AAACCTTGCGCAGCA TERM 2483 2346603 - 2346588 - g 82 -6.8 -4.67982 | overlap 2346599 2346602 TGTCAGTGAAGAAAA GCTCGC CGAA ACGAGC GCGCTGATCGAGCAG TERM 2484 2347818 - 2347857 + G 71 -13.6 -2.73124 | gap 1, opp_overlap 2347822, overlap 2347814 2347813 2347817 GGATCCCCTCTACGA CGAAGC-CGTCGCGTTCGT GGT GCGAACCCGACGCGCGTCG ATTTCGGCGGTGCAG Bphy_2089 2343889 - 2347998 + | cell division FtsK/SpoIIIE Bphy_2090 2349261 - 2348104 - | 6-phosphogluconolactonase Bphy_2091 2349652 - 2349807 + | hypothetical protein TERM 2485 2349894 - 2349869 - T 73 -12.5 -2.79183 | CGTACCGCGATCACA CCGACCGCTCG GGCG CGAGCGGCCTG ATCGACGACACCTCG Bphy_2092 2350272 - 2350027 - | hypothetical protein TERM 2486 2350395 - 2350379 - H 70 -3.7 -4.7078 | opp_overlap 2350394, overlap 2350380 GTAAGCATCCAAAAA CGGTATT GCC AATACCT CGAACGCTCATGAGC TERM 2487 2350801 - 2350786 - g 82 -6.8 -4.64383 | overlap 2350780 AAGGAGAAACGAAAA CATCCG AAAG CGGACG TACGGTATCGAACGA TERM 2488 2352179 - 2352191 + G 79 -6.2 -4.59853 | overlap 2352163 GAGCGTGCTGCTGAT GCCG CTGCT CGGC TTTTTGCCGCCTTCA Bphy_2093 2350473 - 2352656 + | glycoside hydrolase 15-related TERM 2489 2352859 - 2352811 - f 70 -4.9 -4.55491 | overlap 2352838 2352841 CACGTAACCAGAAAA CGGCCCGCCTCGTCGCTGCGCGT CAA ACACGCTGCCCCTGCGCGAACCG CTAACGCTGGAGCAC Bphy_2094 2352877 - 2354157 + | polyhydroxyalkanoate depolymerase, intracellular TERM 2490 2354267 - 2354250 - T 100 -12.7 -5.17576 | opp_overlap 2354250 GATGAATGCAAAAAA CGGCCTC CTAC GAGGCCG TTTTTCATTGAAGCG TERM 2491 2354250 - 2354267 + T 100 -12.7 -4.8622 | opp_overlap 2354250 GATGAATGCAAAAAA CGGCCTC CTAC GAGGCCG TTTTTCATTGAAGCG Bphy_2095 2354933 - 2354301 - | TetR family transcriptional regulator TERM 2492 2356011 - 2355975 - g 89 -4.9 -5.15969 | overlap 2355976 GCGGAAGCGAAAAAA CGCGCGATCATCCAGGC CGC GCTCGAACGCGCGCGCA AGAAAAAGGAAGACA Bphy_2096 2355312 - 2356187 + | electron transport complex, RnfABCDGE type, B subunit Bphy_2097 2356197 - 2356841 + | endonuclease III TERM 2493 2357026 - 2357040 + G 79 -2.7 -5.00616 | overlap 2357025 GTTCAATCCCAGCCG CGACG AAGTC CGCCG TTTTTTCACCGACAC Bphy_2098 2356916 - 2357443 + | hypothetical protein TERM 2494 2357512 - 2357485 - T 100 -20 -4.07568 | opp_overlap 2357489, overlap 2357489 TCCGTCTCCCGAAAA CAAACACCCCGC ATGT GCGGGGTGTTTG TGTCGATGCATGAGC TERM 2495 2357508 - 2357489 - T 100 -15 -4.64861 | opp_overlap 2357489, overlap 2357485 TCTCCCGAAAACAAA CACCCCGC ATGT GCGGGGTG TTTGTGTCGATGCAT TERM 2496 2357489 - 2357508 + T 100 -15 -4.06678 | opp_overlap 2357489 2357485 TCTCCCGAAAACAAA CACCCCGC ATGT GCGGGGTG TTTGTGTCGATGCAT Bphy_2099 2357935 - 2357552 - | cytochrome c class I TERM 2497 2357896 - 2357868 - G 71 -4.3 -4.46926 | overlap 2357869 GATGCGACGACAAAA CCGGCCAGCGCGA ACG TCGCGCATGCAGC CTTGACCACCGTATG Bphy_2100 2358426 - 2358046 - | cytochrome c class I TERM 2498 2358132 - 2358169 + g 80 -4.7 -4.84359 | gap 1, overlap 2358090 2358133 GGTCGGACAGCGACA CGGCGACCGCATGCATCG TGT CGAAATG-GCGGTCGCCC TTTTTGTAGGCGTGC TERM 2499 2359301 - 2359325 + G 74 -2 -4.75174 | gap 1, opp_overlap 2359289 2359295, overlap 2359303 2359304 2359314 CAACGAGAAGGAACT GC-CCGACGCA TTCC TGCGCCGCTGC TTTTTCCATTACATC Bphy_2101 2358810 - 2359652 + | ATPase TERM 2500 2360562 - 2360531 - g 72 -8.6 -3.9461 | gap 1, overlap 2360528 2360532 CCTGTGGAAGAACAA CCGCCGCCGGCACGT CGA ACG-GCTGGCGACGT GGGACATGCTCCACA Bphy_2102 2359689 - 2360864 + | hypothetical protein Bphy_2103 2360990 - 2362201 + | benzoate transporter Bphy_2104 2362451 - 2363404 + | transaldolase TERM 2501 2363432 - 2363460 + F 100 -16.7 -5.06414 | CATTCGTCGTGTCAA GCGCGCGTGGC CCGCAAA GCCGCGCGCGC TTTTTGTTGGCGCAG Bphy_2105 2363595 - 2364029 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_2106 2365241 - 2364045 - | hypothetical protein TERM 2502 2364159 - 2364181 + g 91 -10.5 -4.60949 | opp_overlap 2364159 CTGCGCGAGCCACAA CGGCCCCTG CAGTT CAGGCGCCG TTTCTTTGTCCTGTG TERM 2503 2364881 - 2364930 + g 84 -14.1 -3.65201 | gap 1, overlap 2364882 GCTGCAGGATCAGCG CGAGACCGAGCGCGGCGCCGAGCA GCG TGCCC-GCGGCGCGCTCGGCCGCC TTCTTGCGGATGTTG TERM 2504 2364882 - 2364929 + g 87 -17.6 -2.78639 | gap 1, overlap 2364881 CTGCAGGATCAGCGC GAGACCGAGCGCGGCGCCGAGCA GCG TGCCC-GCGGCGCGCTCGGCCGC CTTCTTGCGGATGTT TERM 2505 2365092 - 2365077 - G 71 -4 -4.57073 | gap 1, overlap 2365079 CAGGCTGTGGAAAAA CT-TCGC GTG GCGATAG CGGTAATACGGGGAC TERM 2506 2365320 - 2365341 + r 93 -17.3 -3.25823 | opp_overlap 2365320 AGCATAAACGAAAAA GCCCGCAGC ATCC GCTGCGGGC TTCGTGTGCGACGGG TERM 2507 2365341 - 2365320 - R 100 -17.3 -5.05505 | opp_overlap 2365320 AGCATAAACGAAAAA GCCCGCAGC ATCC GCTGCGGGC TTCGTGTGCGACGGG Bphy_2107 2366924 - 2365374 - | Na+/solute symporter Bphy_2108 2367145 - 2366921 - | hypothetical protein TERM 2508 2367126 - 2367156 + g 81 -9.6 -4.3295 | overlap 2367128 TTGCTGGCCTTGTTG GCGGCGGCGTCGTG AGC CATGACGTCTCCTC TTTCCTTTTATTGAA TERM 2509 2367128 - 2367154 + g 74 -10.8 -3.7519 | overlap 2367126 GCTGGCCTTGTTGGC GGCGGCGTCGTG AGC CATGACGTCTCC TCTTTCCTTTTATTG Bphy_2109 2368441 - 2367524 - | hypothetical protein TERM 2510 2368451 - 2368467 + r 87 -7.9 -4.72272 | opp_overlap 2368449, overlap 2368453 CGTCATGTAAGGATG TCGCGCC ACA GGCGCAA TTTTTGGTCGAACGA Bphy_2110 2368911 - 2368438 - | hypothetical protein Bphy_2111 2369603 - 2368911 - | chorismate lyase Bphy_2112 2369782 - 2370048 + | hypothetical protein TERM 2511 2370099 - 2370080 - T 100 -13.6 -5.48825 | opp_overlap 2370080 TAGCAGGCAAAAAAA TGCGCTGC CGAA GCAGCGCA TTTTTACCATCCCGG TERM 2512 2370080 - 2370099 + T 100 -13.6 -4.62069 | opp_overlap 2370080 TAGCAGGCAAAAAAA TGCGCTGC CGAA GCAGCGCA TTTTTACCATCCCGG Bphy_2113 2372029 - 2370137 - | heat shock protein Hsp90 TERM 2513 2371658 - 2371687 + g 78 -4.1 -4.77036 | opp_overlap 2371655 2371656 GCCCGAGTAGAAGCC GACGCCGAACTGG CCGA TCAGCGCCGCGTC TTTTTGCTGGTCGCC Bphy_2114 2373622 - 2372153 - | transcriptional regulator TERM 2514 2372314 - 2372297 - G 74 -2.5 -4.72272 | overlap 2372275 CGGTGTCAGCAAAAA GCCTTCC TCAT GGCCGGC CGCCGCGAGCGCATC Bphy_2116 2374714 - 2375619 + | hypothetical protein TERM 2515 2376871 - 2376832 - g 74 -4.8 -4.56597 | gap 1, overlap 2376833 2376836 TGCCGCCCGCAAAAA TCGACGAAGGCGTGGCGCG CCT CGCGCAACTCATCCG-CGC ACGCGTTTGAGACAT Bphy_2117 2375685 - 2376881 + | GntR family transcriptional regulator Bphy_2118 2376993 - 2377457 + | endoribonuclease L-PSP TERM 2516 2377479 - 2377495 + F 78 -10.9 -3.72576 | GCGATCCGCGTGCAA GTGTTCG TCG CGAACAC TTTCGTCGAGCGCGA TERM 2517 2377525 - 2377558 + F 100 -13.9 -4.72986 | opp_overlap 2377514 2377525, overlap 2377513 AATACGACGCCAACA CGCCGTCGATGATGT GAAA GCGTTATCGGCGGCG TTTTTCATGGGCGTG Bphy_2119 2377627 - 2378517 + | PhzF family phenazine biosynthesis protein TERM 2518 2378645 - 2378679 + F 100 -27.4 -3.31461 | opp_overlap 2378645 GCAAGCCGATGACAA CGCGGCCATTCATGCA GAC TGCATGAATGGCCGCG TTGTCAAGATGGCTG TERM 2519 2378679 - 2378645 - f 100 -27.4 -3.42574 | opp_overlap 2378645 GCAAGCCGATGACAA CGCGGCCATTCATGCA GAC TGCATGAATGGCCGCG TTGTCAAGATGGCTG TERM 2520 2379225 - 2379213 - g 71 -4.1 -4.56597 | opp_overlap 2379223, overlap 2379215 2379217 CTCTCGGTTGAAAAA GACAC GAC GTATC GCGAGGCGATGGCCT TERM 2521 2379235 - 2379249 + G 75 -7.1 -4.36914 | opp_overlap 2379217, overlap 2379223 CGTATCGCGAGGCGA TGGCC TCGGC GGCCA TTTTGTCCGCGGCAC TERM 2522 2379693 - 2379677 - g 89 -15.1 -3.79906 | opp_overlap 2379679 CGACTTCTATAACAA CGCGGCC ATC GGCCGCG ACGGCGTGATCGCCG Bphy_2120 2379057 - 2381432 + | diguanylate cyclase/phosphodiesterase TERM 2523 2382426 - 2382388 - g 81 -11 -4.07568 | opp_overlap 2382376, overlap 2382422 TGCCGGTGTTGAAAA CGCTGTTCGTCGCGCC CGCTATC GGTGTGACGAACAACG AGTTCACGCTGGCGT Bphy_2121 2381598 - 2382833 + | chromate transporter TERM 2524 2382870 - 2382887 + T 71 -8.3 -4.05788 | opp_overlap 2382870 GCCGCCAATGTACAA GCGCCGC ATTT GCGGGGC TTTCGTTTGGAACGC Bphy_2122 2383370 - 2382912 - | hypothetical protein TERM 2525 2383102 - 2383082 - G 79 -10.5 -4.11371 | GAATATGCCCGAAAA TCAGCATCA TGA TGATGCCGA TGCCCGCCATCGCGT Bphy_2123 2385877 - 2383556 - | DNA topoisomerase IV, A subunit TERM 2526 2384893 - 2384950 + g 79 -11.1 -3.83502 | gap 1, opp_overlap 2384884 CGAACACGAGACGCA CGGGCGCATCCTTGCCCGACTCGTCGCG TAC CGCGTCGAGCAGGCCGAGCA-GCGTCTG TTTCGTCTGCAACTG Bphy_2124 2387917 - 2385932 - | DNA topoisomerase (ATP-hydrolyzing) TERM 2527 2387118 - 2387136 + g 77 -8.8 -4.3255 | ACGACCCACGCCGCG CCTTCGCC TTC GGCAAAGG TTTCTTCGTTCGAGC TERM 2528 2387885 - 2387903 + g 81 -5.2 -4.87291 | CTTGATCGATGCTTC GCTATACG CGG CGTTTGGC TTTTTCGTTGACATG Bphy_2125 2390152 - 2388227 - | ABC transporter related TERM 2529 2388455 - 2388480 + g 75 -10.3 -3.93288 | overlap 2388474 CGACAGCTTGACCGT GCGCTGCGCGT TGCG ACCCGCCGCGC TTTCCTTCGGTGCGG TERM 2530 2389154 - 2389131 - G 74 -5.2 -4.56775 | gap 1, opp_overlap 2389145 ACCGTCGTCGAAAAA CGGTCGACCAC GGT GCGCTCG-CCG TAGCGCTTCGTCACG TERM 2531 2389630 - 2389652 + g 89 -12.7 -4.18018 | gap 1 CGGGCTGCACGACGA GCGCG-CGCG CCAG CGCGACGCGC TTTTGCATGCCGCCC TERM 2532 2390317 - 2390350 + r 74 -11 -3.59979 | opp_overlap 2390297 CCCGTTCGCGGCGGG CGTGCGCGGCAG CAGCGGATCA CTGCCGCGCAAG TTTCGCGTGCGCGAA Bphy_2126 2390778 - 2390377 - | hypothetical protein TERM 2533 2390958 - 2390937 - H 76 -12.3 -3.47403 | opp_overlap 2390937, overlap 2390944 GGAACTGATAACGAA CCGAAAGGC GTCG GCCTTCCGG CGAATTCCGGTAATA Bphy_2127 2391059 - 2391235 + | rubredoxin-type Fe(Cys)4 protein TERM 2534 2391269 - 2391306 + T 100 -21.4 -4.57837 | gap 1, overlap 2391272 AGCGCTTGCTGTTGT CG-AGCGGTCCGTGGGC CATCT GCCCGCGGACCGCTTCG TTTTTGGCGGCGTGT TERM 2535 2391272 - 2391302 + T 100 -21.9 -3.80855 | overlap 2391269 GCTTGCTGTTGTCGA GCGGTCCGTGGGC CATCT GCCCGCGGACCGC TTCGTTTTTGGCGGC Bphy_2128 2392071 - 2391331 - | methyltransferase type 11 TERM 2536 2391717 - 2391668 - G 81 -14.4 -3.53012 | gap 2, opp_overlap 2391708 TTGCGGCTCTCGAAA GCCA-GCTGCCCGCC-CGTACCCA GCGC TGCGTACGCGGCAGCCAGCGTGGC ATCGAAGCTGGTGTC Bphy_2131 2394524 - 2393721 - | hypothetical protein Bphy_2132 2395490 - 2394894 - | resolvase domain-containing protein Bphy_2133 2396958 - 2395648 - | heat shock protein DnaJ domain-containing protein TERM 2537 2397494 - 2397508 + r 75 -10 -3.70149 | opp_overlap 2397493 2397496 GCACATAGCAGACAG TAGGCG CTA CGCCTA TTTCACTGCTCTCAC Bphy_2134 2399290 - 2397995 - | restriction endonuclease-like protein TERM 2538 2398334 - 2398355 + g 71 -4.3 -4.57569 | AGAGATTTCGCTGTC GGGCGCG TTATATGT CTCGCCC TTTTTCACGACCTGA Bphy_2135 2399394 - 2399747 + | hypothetical protein Bphy_2136 2399825 - 2400406 + | hypothetical protein TERM 2539 2400596 - 2400620 + T 100 -10.8 -5.72622 | gap 1, opp_overlap 2400591 2400596 AATGCCAAATGAAAA CCCGCAACAGC TCGC GCT-TTGCGGG TTTTTTGTTTGTCAC TERM 2540 2400620 - 2400596 - T 90 -10.8 -4.564 | gap 1, opp_overlap 2400596, overlap 2400591 AATGCCAAATGAAAA CCCGCAACAGC TCGC GCT-TTGCGGG TTTTTTGTTTGTCAC Bphy_2137 2400992 - 2400711 - | hypothetical protein Bphy_2138 2401060 - 2401329 + | hypothetical protein Bphy_2139 2401767 - 2402090 + | hypothetical protein TERM 2541 2402109 - 2402151 + F 70 -11.9 -2.75268 | gap 2, overlap 2402108 GACGCGCCTGGCACG GCCG-CGGCGCCCCGCT-CCG CCG CGGCATCGGCGCGCCGACCGC GTTTAACAATCATTG TERM 2542 2402453 - 2402435 - g 82 -3.8 -5.01422 | overlap 2402437 TCACACAAAAAGAAA TCGCCG CGCATGT CGGCAA GGACATCAAGACGGT TERM 2543 2402874 - 2402853 - g 86 -3.5 -5.1356 | overlap 2402855 CGTCAGCAAGAAAAA CGCGCTCGG CCGG CCGCACGGG TTCGAATGCGCGACG Bphy_2140 2402371 - 2403657 + | DNA-cytosine methyltransferase Bphy_2141 2403657 - 2404103 + | DNA mismatch endonuclease Vsr Bphy_2142 2404276 - 2404785 + | PEBP family protein TERM 2544 2406335 - 2406375 + G 77 -15.4 -2.62184 | gap 1, overlap 2406350 CCTGCGTCAGCATGC TGCGCGTCGCGCACAGCGC GCCG GCGG-GCGCGTGACGCGCA TCCTCTGCCCGCGCG Bphy_2143 2404927 - 2406369 + | major facilitator transporter TERM 2545 2406762 - 2406792 + G 72 -11 -3.55444 | overlap 2406756 CGGCGCGGTCGGGGG CGCCGTGATCGGCG TCG CGGTGTTCGCGGCG TTTGCGGCGTCGACA TERM 2546 2406798 - 2406840 + G 73 -14 -2.88861 | GTTCGCGGCGTTTGC GGCGTCGACACCCGTCGTGA TCA TCGCCGCGGGCGTCGGCGCG TATCTGGGCCTGCTC Bphy_2144 2406526 - 2407113 + | hypothetical protein TERM 2547 2407166 - 2407145 - T 100 -13 -4.55798 | opp_overlap 2407165 GATTGGAAACGAAAA CGGCAGCC TCGATG GGCTGCCG CCGGTGACGCCTGTG Bphy_2145 2408622 - 2407201 - | alpha,alpha-trehalose-phosphate synthase (UDP-forming) TERM 2548 2408764 - 2408748 - R 74 -7.2 -4.34345 | opp_overlap 2408750, overlap 2408739 GACAGACGAGCAAAA GCCCGC TGTCC GCGAGC TCGCGCGAAGCAGAT Bphy_2146 2409035 - 2408823 - | hypothetical protein TERM 2549 2409229 - 2409205 - R 76 -13.6 -2.78384 | gap 1 GCGTCGCCGAGCACA GCCGC-CGCTC GAGC GAGCGAGCGGC TCTCAAAGACCGGGG Bphy_2147 2409465 - 2409232 - | hypothetical protein TERM 2550 2409373 - 2409401 + g 74 -11 -3.63627 | gap 2, overlap 2409360 GGGCTGGCCCGGCTG CGCCGGCCCCGGGC CCG GCTCGGG-C-GGCG TTTCGGGTGTGGAAG Bphy_2148 2411118 - 2409607 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 2551 2409972 - 2410000 + g 77 -10.9 -3.7282 | opp_overlap 2409972 2409969 ACGGGTACGACAGCA GCATCTCCCGCAC GGC GGGCGGGAAGTGC TTCTTCGTGCCGTGC TERM 2552 2411211 - 2411228 + r 73 -3.3 -4.8269 | ATTCTTGCTAGCAAA CCGCATC TATT GTTGTGG TTTTTGCTCATTATA TERM 2553 2411318 - 2411269 - R 75 -10 -3.71915 | gap 3, overlap 2411265 TCAAAAAAACATCAA GTCGGCATACGTCGCGGCGCACGAC CGT GCCGC-CGCCGCGA-GC-CGCCGGC TCAGCCACGCGGGAA Bphy_2149 2411570 - 2411319 - | hypothetical protein Bphy_2150 2411969 - 2411652 - | protein of unknown function DUF883 ElaB Bphy_2151 2412035 - 2412319 + | hypothetical protein TERM 2554 2412846 - 2412831 - g 74 -10.4 -3.68886 | opp_overlap 2412832 ACGAAGTCACCGAAA TGGCGC CCGT GCGCCA GGTGAAACTGCTGCG Bphy_2152 2412407 - 2413462 + | sigma-54 dependent trancsriptional regulator Bphy_2153 2413891 - 2414403 + | hypothetical protein Bphy_2154 2414400 - 2414954 + | hypothetical protein TERM 2555 2415005 - 2414988 - T 93 -12.7 -4.40003 | opp_overlap 2414988 CGCGACAAACACAAA GGGGAGC CGCG GCTCCCC TTTTCCATTGCCCGC TERM 2556 2414988 - 2415005 + T 93 -12.7 -4.27316 | opp_overlap 2414988 CGCGACAAACACAAA GGGGAGC CGCG GCTCCCC TTTTCCATTGCCCGC Bphy_2155 2416400 - 2415054 - | ABC transporter related Bphy_2156 2418177 - 2416423 - | binding-protein-dependent transport systems inner membrane component TERM 2557 2417437 - 2417455 + g 89 -2.3 -5.41143 | gap 1 CATTGTCAGGATCAC CCAGC-CG ATTG CGTGCAGG TTTTTTTCGGCGATG Bphy_2157 2418894 - 2420573 + | diguanylate cyclase Bphy_2158 2420722 - 2420988 + | hypothetical protein Bphy_2159 2422428 - 2421088 - | integral membrane sensor signal transduction histidine kinase Bphy_2160 2423125 - 2422400 - | two component transcriptional regulator Bphy_2161 2423349 - 2423897 + | hypothetical protein TERM 2558 2423955 - 2423930 - T 100 -11.1 -5.18726 | opp_overlap 2423930 CCCCGACAAGAAAAA CGCCACGGCAA AGCG CTTCCGTGGCG TTGCTACGTGGCACG Bphy_2162 2424708 - 2424001 - | pirin domain-containing protein TERM 2559 2424036 - 2424049 + g 76 -9.5 -4.09685 | opp_overlap 2424030 CGAACAGCAGCACTT CGGCG CCTT CGCCG TTTTCGACGGTGACG Bphy_2163 2425126 - 2425902 + | cationic amino acid ABC transporter, periplasmic binding protein TERM 2560 2425967 - 2425936 - f 71 -7 -4.15453 | opp_overlap 2425935 2425936, overlap 2425937 CAAGCGATGGCAAAA GCTCGGGCAGGCAC GGAT GGGCCGGCCCGCGA GCTTCGTAATACAGT Bphy_2164 2426230 - 2426919 + | polar amino acid ABC transporter, inner membrane subunit Bphy_2165 2426916 - 2427629 + | polar amino acid ABC transporter, inner membrane subunit Bphy_2166 2427660 - 2428445 + | ABC transporter related TERM 2561 2428475 - 2428492 + F 95 -10.5 -4.77036 | TTATGTAGTTTTACA GGGCGCT TACC GGCGCCC TTTTTCATACTCACG Bphy_2167 2429026 - 2430135 + | OmpC family outer membrane porin TERM 2562 2430202 - 2430229 + T 100 -14.2 -5.95539 | opp_overlap 2430219 CGAGAGGCGCGTATC GGTGCGATGTCC GAAA GGGTATCGCACC TTTTTTTATTTCCGC Bphy_2168 2430703 - 2430365 - | nitrogen regulatory protein P-II Bphy_2169 2432890 - 2430833 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 2563 2432107 - 2432123 + g 100 -13.7 -4.2828 | opp_overlap 2432099 2432097 GAAAACGCTCCGACT CGGCGAG CAT CTCGCCG TTTTCATAGATCAAC TERM 2564 2432777 - 2432738 - G 72 -11.5 -3.54424 | gap 3, opp_overlap 2432728 2432745 GCCGAGTTCGGGAAA CGC-GACGA-GC-GCCGCGC CTT GCGCGGCCGCCTCGTGTGCG AGCCTGAGCGTTTCG TERM 2565 2432996 - 2433034 + H 71 -8 -4.07246 | TCAAGGTCTCGATCA TGTGCGCGCGACGACC CTGCCGC GCACTTCGCGCGCGCA TTTGCTTTAACATGG TERM 2566 2433789 - 2433802 + G 71 -3.7 -4.57569 | opp_overlap 2433783, overlap 2433779 2433790 GCGAGGACATCGGCG ACGCC GACT GGCGC TTTTTCAGCAAGTGC Bphy_2170 2433113 - 2434285 + | hypothetical protein Bphy_2171 2434304 - 2434636 + | excinuclease ABC subunit C Bphy_2172 2434791 - 2435117 + | histone family protein nucleoid-structuring protein H-NS TERM 2567 2435359 - 2435340 - T 100 -13.6 -4.85782 | opp_overlap 2435342 TTGCCCAAAAACAAA GACGCTCC CGAG GGAGCGTC CTGTCAGCCACGAAG Bphy_2173 2435916 - 2435389 - | inorganic diphosphatase TERM 2568 2436434 - 2436383 - g 86 -14.5 -3.53091 | gap 3 ATGGGGCGTCGTAAA CGCCGC--CGAGCGTGGAC-GCCTGC TGT ACCGGCTGTCCATGCTCGTCGCGGCG TGCCACGAAGAACTG TERM 2569 2436520 - 2436489 - g 75 -12.2 -3.55622 | gap 1, opp_overlap 2436483 2436489 2436490 2436494, overlap 2436491 GGCAAGCCGCTCAAA CAGGCGCGCGGCGAC GCC GCCGCC-CTCGCCCG CTATTTCGAGTTCTA TERM 2570 2436512 - 2436491 - g 80 -13.7 -3.35522 | gap 1, opp_overlap 2436489 2436490 2436483 2436494, overlap 2436489 CAAGCCGCTCAAACA GGCGCGCGGC GAC GCCGC-CGCC CTCGCCCGCTATTTC TERM 2571 2437049 - 2437028 - g 81 -11.5 -4.09685 | CGCCATCGTGCAAAA CGCCGGGCA GACC TGCTCGGCG GGCAGCCGCGTGCTG Bphy_2174 2436198 - 2437637 + | aldehyde dehydrogenase Bphy_2175 2437704 - 2438462 + | short-chain dehydrogenase/reductase SDR TERM 2572 2438779 - 2438795 + G 72 -6.5 -4.30844 | opp_overlap 2438774, overlap 2438780 ATACAGAAAGGTCGC CTGGCGT CTA ACGCCAC TTTTGATGCTCAGCT Bphy_2176 2438693 - 2440012 + | major facilitator transporter TERM 2573 2440015 - 2440033 + T 74 -13.8 -2.60962 | overlap 2440014 2440017 AGTGAATCGCTAGGG CGCCTGCG CGG CGCGGGCG GGTTTCTTGTTTCTG TERM 2574 2440017 - 2440035 + T 83 -8 -4.63952 | overlap 2440015 2440014 TGAATCGCTAGGGCG CCTGCGCG GCG CGGGCGGG TTTCTTGTTTCTGGT Bphy_2177 2441317 - 2440127 - | HemY domain-containing protein Bphy_2178 2443380 - 2441320 - | protein of unknown function DUF513 hemX TERM 2575 2442534 - 2442505 - G 80 -14.3 -3.35197 | overlap 2442506 CGCGAGAGACAGCAA CGTGCGGGCAATG CGCT CATCGCCCGCACC GGACACCGTAATGCT TERM 2576 2442533 - 2442506 - G 83 -17.8 -2.60797 | overlap 2442505 GCGAGAGACAGCAAC GTGCGGGCAATG CGCT CATCGCCCGCAC CGGACACCGTAATGC TERM 2577 2443153 - 2443186 + g 80 -16.8 -2.52676 | gap 1, overlap 2443162 CGCGTACTTTTCCAG CGACGCGAGCGCCGC ACGCA GCGGCG-TTGCGTCG TCGGTTGCGGCGATC Bphy_2179 2444363 - 2443380 - | porphobilinogen deaminase TERM 2578 2443949 - 2443924 - G 70 -11.1 -3.30338 | gap 1, opp_overlap 2443889, overlap 2443913 2443925 ACAAGCTCGGGATAA CGCGCGCGCAGC ATC GCTTCGCG-GCG CAGGCTCGACGTGCC TERM 2579 2444029 - 2444019 - G 72 -8.2 -4.03234 | CTGGTTCGAGACAAA CGCG TCG CGCG GATCTTCGCGCTCCA TERM 2580 2444503 - 2444469 - H 74 -13.6 -2.69468 | gap 1, overlap 2444471 2444473 CAGTTCGACAGAGGA GACAGGCCCGC-CGC CGCCAT GCGCGCGAGCCCGTC CGAAAGCCGTATCGA TERM 2581 2445736 - 2445707 - g 89 -15 -3.70773 | GCCGATATTGAAGAA GCGCTCGTCGAG CACGGC CTCGACGCGCGC CTGCCCCCCTTCTTC TERM 2582 2446385 - 2446354 - g 70 -11.6 -3.36492 | gap 1, opp_overlap 2446348, overlap 2446327 2446323 2446376 2446377 CTCCGAAGCGGAGAA GCTGCGCGTGCTGCT GGC AG-AACTCGCGCAGC CGCGCCTGTTGCGCT Bphy_2180 2444729 - 2447821 + | phosphoenolpyruvate carboxylase TERM 2583 2447828 - 2447855 + T 100 -13.4 -4.66609 | overlap 2447829 ACCGGCTGAGTTGGT TTGCGCTGCGGT TCTT GCCGCGGCGCAG TTTTTCGCTGGCATC TERM 2584 2447829 - 2447854 + T 87 -14.7 -3.39483 | overlap 2447828 CCGGCTGAGTTGGTT TGCGCTGCGGT TCTT GCCGCGGCGCA GTTTTTCGCTGGCAT TERM 2585 2447944 - 2447931 - T 72 -9.5 -3.75229 | CAAACCAGAGGCAAA CGCGG ATGC CCGCG AAAAACCCGGCAACG TERM 2586 2447964 - 2447950 - T 79 -7 -4.57073 | overlap 2447952 GATGCCCGCGAAAAA CCCGGC AAC GCCGCG CCGCATGCAAAACGC Bphy_2181 2448734 - 2447982 - | methyltransferase type 11 Bphy_2182 2448905 - 2449717 + | XRE family transcriptional regulator TERM 2587 2449889 - 2449868 - g 88 -2.2 -5.27923 | gap 1, opp_overlap 2449869, overlap 2449869 CAACTGCATAAAAAA GGCGAAGCC TGGTC GGCT-CGCT TCTCCGAGCCGATGT Bphy_2183 2449844 - 2451250 + | argininosuccinate lyase TERM 2588 2451275 - 2451300 + F 100 -15.5 -5.5112 | opp_overlap 2451275 CTGCCGATGCTCAAA GGCGAACTCTC TTGC GAGGGTTCGCC TTTTTTGTTGGTGGC TERM 2589 2451300 - 2451275 - f 83 -13.3 -3.57144 | opp_overlap 2451275 CTGCCGATGCTCAAA GGCGAACTCTC TTGC GAGGGTTCGCC TTTTTTGTTGGTGGC TERM 2590 2452049 - 2452079 + G 80 -5.3 -4.82901 | GCCGCTGCCGTTCGC GTACTCGGTGATG ATCCA CCGCACCGTGTAC TTTTTCTGCGCGGCG TERM 2591 2452291 - 2452262 - g 76 -13.6 -3.08679 | gap 1, opp_overlap 2452261 GGGGTTCATCGAAGA CGCGGC-GCGCGA TCTGC TCGCGCAGCCGCA ATTGAAGAAGGTGGA Bphy_2184 2451414 - 2452334 + | hypothetical protein Bphy_2185 2453169 - 2452456 - | hypothetical protein TERM 2592 2452636 - 2452596 - G 70 -14 -2.62184 | gap 1 GCGCGCGCGACAGCA CCGG-GCGCGCGTGCGAAG GCAG CTTCGCATGCAAGCGCCGG TAGTAGCGGTTCAGA Bphy_2186 2455454 - 2453172 - | lysine decarboxylase TERM 2593 2454002 - 2453979 - G 75 -13.8 -2.93549 | overlap 2453976 GACCTTGAAGAACCA GTCGTCGCCG TATT CGGCGTCGAC CTTGCGCATCGCGCG TERM 2594 2454667 - 2454697 + g 79 -6 -4.64676 | TCCACCAGCACGATG TCGCCCGGCGCG ACCGTCG CGTGCCAGACGA TTTTGTTGGACGTGG TERM 2595 2455205 - 2455227 + g 77 -11.2 -3.79906 | CGACGATCGCGGGCG CGACGTCGGG CGC CTCGCCGTCG TTGTTCTCGACGTAG TERM 2596 2455508 - 2455472 - R 100 -13 -4.58395 | opp_overlap 2455476 2455494 2455503, overlap 2455475 2455476 GCGATTCTCCAAAAA GAACGACCGCTGGGCT GGTTA AGCGCAGCGGTCACCC GGATAGCTGGTGATT TERM 2597 2455505 - 2455475 - R 100 -13.3 -4.40963 | opp_overlap 2455476 2455494 2455503, overlap 2455472 2455476 ATTCTCCAAAAAGAA CGACCGCTGGGCT GGTTA AGCGCAGCGGTCA CCCGGATAGCTGGTG TERM 2598 2455504 - 2455476 - R 86 -14.6 -3.23855 | opp_overlap 2455476 2455494 2455503, overlap 2455475 2455472 TTCTCCAAAAAGAAC GACCGCTGGGCT GGTTA AGCGCAGCGGTC ACCCGGATAGCTGGT Bphy_2187 2456108 - 2455539 - | deoxycytidine triphosphate deaminase Bphy_2188 2457037 - 2456417 - | superoxide dismutase copper/zinc binding Bphy_2189 2458228 - 2457140 - | cobyrinic acid ac-diamide synthase TERM 2599 2458342 - 2458354 + H 74 -7.7 -4.13767 | TGTCTCATTGGCACG CTTGC CGC GCAAG TTTTGCAATAGGGCC Bphy_2190 2458493 - 2459146 + | OmpA/MotB domain-containing protein TERM 2600 2459189 - 2459160 - f 71 -13 -2.62515 | gap 1, opp_overlap 2459155 AATGGTTGGAGACGA CGCGTCTTCGCTG CCAGT CAGCGAAGAC-CG TTCGACAAACATGAT TERM 2601 2459377 - 2459395 + F 100 -13.1 -5.82316 | CTTGTCGTTGTTGCT CCGGGGC CCATA GCCCCGG TTTTTTTTGCCTGCT TERM 2602 2459673 - 2459632 - f 75 -12.1 -3.28712 | overlap 2459609 CGCCGCGTTCGACAA CCCGAGCTGCACGAGCGGA CATT CCCGCCCGTGCGGTCCTGG GCACAGCGCCGTCCG TERM 2603 2460670 - 2460660 - g 83 -2.4 -5.14563 | overlap 2460661 GCGTGGACGAAAAAA GGCG CGA CGAC CGAGCAATATCATTT TERM 2604 2460990 - 2461007 + G 72 -8.3 -3.96148 | opp_overlap 2460988 AAGTATGTGAACATC GCCAGCC GGGC GGCGGGC TTTCTGCTCAAGCGC TERM 2605 2461567 - 2461518 - g 74 -11.4 -3.66178 | GCTGCCAAGGCCAAA GCCAAGGCG-CACGCGAAAGCGAC GGCG GCCGCCCACG-GCGACGCCTCGGC AAAGCCCGACGACAG Bphy_2191 2459745 - 2461925 + | methionyl-tRNA synthetase TERM 2606 2461968 - 2461985 + F 100 -11.3 -5.86061 | opp_overlap 2461968 CCGTCAACCAGGAAA GCACGTC TTCG GACGTGC TTTTTTTTCGTCCGG TERM 2607 2461985 - 2461968 - f 81 -11.3 -3.84246 | opp_overlap 2461968 CCGTCAACCAGGAAA GCACGTC TTCG GACGTGC TTTTTTTTCGTCCGG TERM 2608 2462148 - 2462170 + F 77 -13.4 -2.87132 | opp_overlap 2462147 2462127 2462136, overlap 2462149 TCACGGCGAATGCAT CGGCGGCG CCCCATA CGCCGCCG TGTCTCGCGCGGCGA TERM 2609 2462328 - 2462312 - g 71 -9.4 -3.78775 | CGCGCGATTACGAAA CAGCGC ATGAA GCGCTG GTCGGACTAATCAAT TERM 2610 2464151 - 2464128 - g 71 -12.4 -3.1919 | gap 1, overlap 2464125 2464126 ACAGGCACAAAACCA CGCAGCGCCGC ACC GCGGCGC-ACG AATAAAAGGCTGATC Bphy_2192 2462251 - 2464164 + | putative adhesin processing HmwC-like protein TERM 2611 2464211 - 2464236 + T 100 -8.2 -5.55664 | gap 1, opp_overlap 2464211, overlap 2464218 TGGTCCGCAGATCAA CCGGCGAGGCG CGCGA CGCA-CGCCGG TTTTTTTCGTCGTCC Bphy_2193 2468604 - 2464258 - | hypothetical protein TERM 2612 2466739 - 2466758 + g 79 -7 -4.57837 | overlap 2466754 TTCGATCTTGCGCGA CGCTGGGG CTTT CGCCGGCG TTTTTGCGGCCGTCT TERM 2613 2468483 - 2468510 + g 89 -18.4 -3.02511 | opp_overlap 2468479 2468480 ACCTTCCACAACGGG CGCCGCCGCTTG CGGG CGGGCGGCGGCG TGTTCGGACCGTCCG Bphy_2194 2470396 - 2468621 - | surface antigen (D15) TERM 2614 2470033 - 2470074 + g 79 -6.5 -4.4767 | gap 1, opp_overlap 2470033 2470025 2470036, overlap 2470035 2470036 ATGAAACCGACGAAA TGATGGTGCGCG-GGCCG GGATCGA CGGACACGCGCACCACTG TTTTGTCATCGATGG TERM 2615 2470035 - 2470072 + g 73 -9.1 -3.84585 | gap 1, opp_overlap 2470033 2470025 2470036, overlap 2470033 2470036 GAAACCGACGAAATG ATGGTGCGCG-GGCCG GGATCGA CGGACACGCGCACCAC TGTTTTGTCATCGAT TERM 2616 2470630 - 2470576 - H 83 -14.5 -3.14132 | GCGGCGCGCCATTAA CGG-GATCGCCGCGG-GATCGCCGCGG GATCG CCGCGG-GATCGCCGCGG-GATAGCCG CGGGGAAAGCGGTGC TERM 2617 2470676 - 2470639 - H 74 -11.1 -3.53563 | gap 1 ATAGCCGCGGGGAAA GCGGTGCGCCACGCCGGC CCG GCCGACGGGTTGC-CCGC CTTGGACGCCGCCCG Bphy_2195 2470819 - 2471004 + | hypothetical protein Bphy_2196 2471005 - 2471877 + | chromosome segregation and condensation protein ScpA TERM 2618 2471880 - 2471906 + F 73 -13 -2.75535 | gap 1, overlap 2471874 CCTGCCCGCCTGACA GGCTGCCGGCC CGCTCC GGCCGGC-GCC TCGTTCCAGTATTCG TERM 2619 2472073 - 2472054 - f 72 -8.5 -3.81951 | overlap 2472055 GCGGATATCACGAAA CCGCGCG CTGCGT CGCGCGA CCGAGACAACCACGA Bphy_2197 2472125 - 2472958 + | pantoate--beta-alanine ligase Bphy_2198 2472977 - 2473363 + | aspartate 1-decarboxylase TERM 2620 2473398 - 2473430 + T 100 -11.4 -5.27335 | gap 2 GCCGCAGTTGCACAC GGGCTGACGATGCGCG AGC CGCGCGT--TCAGCCC TTTTTATTTGCGCCC Bphy_2199 2474128 - 2473424 - | cobyrinic acid ac-diamide synthase Bphy_2200 2474352 - 2474771 + | thioesterase superfamily protein TERM 2621 2475104 - 2475119 + G 75 -6.8 -4.38154 | overlap 2475083 2475081 GCCGCGCAATCTCAT TGCGTG ACGA CGCGCA TTTTCTCGCCAATCT TERM 2622 2475931 - 2475920 - g 70 -5.8 -4.25848 | AACCGCTGATGAAAA CGCT GGAT AGCG TCGACGAGGTCAAGA Bphy_2201 2474905 - 2476575 + | TPR repeat-containing protein Bphy_2202 2477090 - 2476656 - | DoxX family protein Bphy_2203 2478668 - 2477214 - | cobyric acid synthase CobQ Bphy_2204 2478824 - 2479372 + | adenosylcobinamide-phosphate guanylyltransferase TERM 2623 2479512 - 2479570 + G 86 -15.9 -3.28791 | gap 2, opp_overlap 2479498 2479511 AGTCGCGCTGAACAC CGGGCGGCGCGGCCGGCTGCTGGGCATCG TCG CG-TGGCTGCTCGCCG-TCGCGCCGCCCG TTCTGGCCGCGACCT TERM 2624 2479793 - 2479778 - g 80 -11.8 -3.73775 | opp_overlap 2479788 CGCACGCCGACGAAA GCGCGC TGTC GCGCGC CGCCGTCGAGTCGGC Bphy_2205 2479369 - 2480310 + | cobalamin biosynthesis protein CobD TERM 2625 2481060 - 2481100 + G 71 -11.9 -3.28924 | gap 3, opp_overlap 2481083 2481084 ATGGCAAGCGGCCAT GCGCGCGC-AGCTCGCGAGC GAAA GCGCGCG-GCTCGC-CGCGC TTCTGAGCGCCCATC TERM 2626 2481164 - 2481213 + G 79 -7 -4.58395 | gap 1, opp_overlap 2481203 GGATCGCCGACGCGC GCGCCGTGCGAGTGCATCGCGCG CTCGC CGCGCAAGGCATCTGGAC-GCGC TTTTTCGCCCGTCCC Bphy_2206 2480314 - 2481315 + | L-threonine-O-3-phosphate decarboxylase Bphy_2207 2481321 - 2482232 + | periplasmic binding protein Bphy_2208 2482827 - 2482237 - | alpha-ribazole phosphatase Bphy_2209 2483561 - 2482812 - | cobalamin-5-phosphate synthase CobS Bphy_2210 2484699 - 2483617 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Bphy_2211 2485515 - 2484706 - | ABC transporter related Bphy_2212 2486561 - 2485512 - | transport system permease protein TERM 2627 2486328 - 2486280 - G 80 -14.3 -3.37499 | overlap 2486241 CAATACCTGAAGCAA CGCGCCCGCGAGCGCGAGCAGCG CCC CGCAGCCGAAGCCCGCGAGCGAG CGCGGCAGGCGCAGC Bphy_2213 2488537 - 2486672 - | TonB-dependent receptor plug TERM 2628 2486830 - 2486863 + g 80 -15.3 -3.14463 | opp_overlap 2486822 2486830 2486829 2486832 CGAACGACGCGAAAT GACGCGCGCGCCGGT TGAG ATCGGTGTGCGTGTC TTCGTCGACGGGATT TERM 2629 2488899 - 2488882 - H 74 -7.7 -4.15222 | overlap 2488883 AGGCGCGTCAAGAAA CGCGGAT CCTC ATCCGCA TCGCGCCTGCCCCTT Bphy_2214 2489087 - 2489449 + | hypothetical protein Bphy_2215 2489446 - 2489760 + | hypothetical protein TERM 2630 2490035 - 2490011 - g 86 -15.7 -3.2794 | opp_overlap 2490011 GGGGACCCATACGAA CGGCATCGGAC CAA GTCCGGTGCCG TTTTTTTTCGTTCAC TERM 2631 2490011 - 2490035 + G 100 -17.9 -5.95166 | opp_overlap 2490011 GGGGACCCATACGAA CGGCATCGGAC CAA GTCCGGTGCCG TTTTTTTTCGTTCAC Bphy_2216 2489904 - 2490083 + | hypothetical protein Bphy_2217 2490152 - 2490622 + | hypothetical protein Bphy_2218 2490816 - 2491538 + | hypothetical protein TERM 2632 2491664 - 2491631 - T 78 -3.7 -4.96848 | gap 1, opp_overlap 2491652, overlap 2491632 GCTCGCAGACAAAAA CCTCAGCTAACCCCGG CCG CCTGGGCC-GCCGAGC GCCCATTCCTCCGAT Bphy_2219 2492538 - 2491633 - | prolipoprotein diacylglyceryl transferase TERM 2633 2491790 - 2491772 - G 82 -6.6 -4.66318 | AGCAGCCCAAGAAAA TCGTCCGG CTC CCGAGCGA ACTCAACGGTAAACC Bphy_2220 2493562 - 2492609 - | LysR family transcriptional regulator TERM 2634 2494338 - 2494310 - g 77 -12.4 -3.65991 | gap 1 AGGGGTCGAACAGAA CGCCTGCCCGAGC ACGG GCTCGTGC-GGCG GCATGTACACGGCCA Bphy_2221 2493750 - 2495423 + | dihydroxy-acid dehydratase TERM 2635 2495494 - 2495527 + F 100 -21.9 -2.56747 | opp_overlap 2495498, overlap 2495498 GCATGCGTCGATGGA TAAAGGGGCACACGG ATCG CCGTGTGCCCCTTTG CTCTTATAATGCGTC TERM 2636 2495523 - 2495498 - f 100 -20.5 -3.91897 | opp_overlap 2495494 2495498 GCGTCGATGGATAAA GGGGCACACGG ATCG CCGTGTGCCCC TTTGCTCTTATAATG TERM 2637 2495498 - 2495523 + F 100 -20.5 -3.98159 | opp_overlap 2495498, overlap 2495494 GCGTCGATGGATAAA GGGGCACACGG ATCG CCGTGTGCCCC TTTGCTCTTATAATG Bphy_2222 2495580 - 2495906 + | cytochrome c class I Bphy_2223 2496688 - 2495918 - | hypothetical protein TERM 2638 2496587 - 2496599 + g 75 -6.9 -4.35044 | CTCATGCGAGCCGCT GCGCT TGG GGCGC TTTGTCTTTGCGTGC Bphy_2224 2497198 - 2496782 - | DNA polymerase III chi subunit HolC Bphy_2225 2498756 - 2497245 - | leucyl aminopeptidase TERM 2639 2498466 - 2498435 - G 71 -12.2 -3.28712 | gap 1, opp_overlap 2498430, overlap 2498436 CCTTGGTCCCGAGAA TGGCG-CGCCACGCG GCG CGCACGGCGTCGCCG TAGACCTTCTGTGTG TERM 2640 2498465 - 2498436 - G 77 -15.7 -2.57132 | gap 1, opp_overlap 2498430, overlap 2498435 CTTGGTCCCGAGAAT GGCG-CGCCACGCG GCG CGCACGGCGTCGCC GTAGACCTTCTGTGT TERM 2641 2498718 - 2498738 + g 71 -3.9 -4.46926 | GAACCCGTTGGTCGA GCCTTTGCT CCA ATCACAGGC TTTTATGCTAAAGTC TERM 2642 2499525 - 2499490 - g 88 -14 -3.86995 | gap 1, opp_overlap 2499489, overlap 2499517 GGAAACGCACAAGAA CGGCGACCG-CTTCGTG GTG CTCGAAAACGGCCGCCG CTATGACGGCGAGCC TERM 2643 2499541 - 2499517 - g 81 -11.4 -4.07568 | gap 1, overlap 2499490 CGTGGTGCTCGAAAA CGGC-CGCCGC TATG ACGGCGAGCCG GGCCATCCCGACTTC Bphy_2226 2498894 - 2500006 + | permease YjgP/YjgQ family protein TERM 2644 2500162 - 2500189 + G 73 -12 -3.30619 | gap 1 CCAGTACGCGGTGCT GCGCGTC-GCGTT GCA AACGCCGTCGCGC TTCTACGAAATCATT Bphy_2227 2500010 - 2501158 + | permease YjgP/YjgQ family protein TERM 2645 2501149 - 2501162 + F 70 -3.7 -4.61482 | overlap 2501119 GCTGAAGTGGGTCGA CCGGC ACTA GCCTG TTCTTTTTTGCGGGG Bphy_2228 2501185 - 2501565 + | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 2646 2501545 - 2501559 + T 71 -10 -3.61609 | overlap 2501547 2501554 GCGATCGCGGGTTAT TGCCTG CGG CAGGCA TTCTGATTTCGCTGC Bphy_2229 2502508 - 2501663 - | Beta-lactamase TERM 2647 2501690 - 2501724 + g 73 -9.9 -3.91084 | gap 1, opp_overlap 2501683, overlap 2501687 GTCGAATACGATTCG CGCCGCCTCGTCGACG ATTG CGTCC-TGTGGCGGCG TTTCCTTCGGCGTCA TERM 2648 2502673 - 2502642 - R 100 -16.6 -3.86653 | overlap 2502643 ATCGAGTAAAGACAA TCGGCCGCATTCAC TCGC GCGAATGCGGCCGG TCAAAGAGACAATGC TERM 2649 2502672 - 2502643 - R 100 -20.1 -2.91269 | overlap 2502642 TCGAGTAAAGACAAT CGGCCGCATTCAC TCGC GCGAATGCGGCCG GTCAAAGAGACAATG Bphy_2230 2503461 - 2502694 - | uroporphyrin-III C-methyltransferase Bphy_2231 2504825 - 2503497 - | sulfate adenylyltransferase, large subunit Bphy_2232 2505813 - 2504851 - | Sulfate adenylyltransferase TERM 2650 2505316 - 2505337 + g 72 -3.5 -4.71426 | opp_overlap 2505316 2505319, overlap 2505311 2505319 GTCGCGGAACGAAAA GATGCGCTC TTTC GCGCGCGCC TTTTCTTCGTCGCGG Bphy_2233 2506659 - 2505919 - | adenylylsulfate reductase, thioredoxin dependent Bphy_2234 2507201 - 2506656 - | hypothetical protein Bphy_2235 2508899 - 2507220 - | sulfite reductase (ferredoxin) Bphy_2236 2509137 - 2510078 + | LysR family transcriptional regulator TERM 2651 2510233 - 2510255 + G 71 -13.4 -3.01712 | CTTGCGCCGCTTCAC GCGCGCCG CCGCGAT CGGCGCGC TGTTCGGCGCCGCCG Bphy_2237 2510180 - 2511367 + | branched chain amino acid ABC transporter periplasmic ligand-binding protein Bphy_2238 2512804 - 2511416 - | hypothetical protein TERM 2652 2512849 - 2512834 - H 71 -10.4 -3.50447 | CGAAGTTCTACACAA CGCTGC TGGC GCAGCG CGACATGATGGGAGG TERM 2653 2513142 - 2513099 - g 100 -21.9 -2.87344 | gap 1, opp_overlap 2513097 2513095 TATCTCGTCGACAGA TCGAGCGGC-GCGGACCAGA AGGTG TCCGATCCGCTGCCGCTCGA CGCGTTCGTCAAATT Bphy_2239 2512988 - 2513245 + | hypothetical protein Bphy_2240 2514406 - 2513261 - | oxidoreductase domain-containing protein Bphy_2241 2515530 - 2514481 - | xylose isomerase domain-containing protein TERM 2654 2515606 - 2515569 - R 90 -16.3 -3.54424 | gap 1, overlap 2515570 GGCTACGTCGGGAAA GCGCCGCGCTTCGCG-CG TGT CGACGCGAAGCGCAACGA GCGCGATCAGAACGG TERM 2655 2515605 - 2515570 - R 100 -19.8 -2.72511 | gap 1, overlap 2515569 GCTACGTCGGGAAAG CGCCGCGCTTCGCG-CG TGT CGACGCGAAGCGCAACG AGCGCGATCAGAACG Bphy_2242 2516578 - 2515613 - | ABC sugar transporter, periplasmic ligand binding protein TERM 2656 2516453 - 2516488 + g 78 -3.8 -4.72272 | GCCGCCTGTGAAACC GTGATCGGCGGTGGGG ATGG CGACGCCGACGGTTAC TTTTTCGTCGGCGCG Bphy_2243 2517790 - 2516777 - | monosaccharide-transporting ATPase Bphy_2244 2519258 - 2517771 - | ABC transporter related Bphy_2245 2520287 - 2519271 - | LacI family transcription regulator TERM 2657 2519397 - 2519359 - G 89 -18.8 -2.9155 | opp_overlap 2519380, overlap 2519354 CGCTGCAACAGCAGA CGCGCAGCCGTTTCGCCA AGC TCGCGCATCGGCTGCGCG ATCGTCGTGAGCGGC Bphy_2246 2520626 - 2521279 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 2658 2521425 - 2521411 - g 79 -11.4 -3.84451 | CGTGGGAAATCGAAA CGGCGA AGA TCGCCG GCAGCGTGTCGATTC Bphy_2247 2521311 - 2521634 + | rhodanese domain-containing protein TERM 2659 2521658 - 2521692 + F 78 -6.2 -4.7173 | overlap 2521665 GCGTTTCCTCGCTTC ATGTCGGGCGCCGGCT TCA GGCCGGCGCTTTTCAA TTTTTACGTCTGGTG TERM 2660 2521665 - 2521685 + F 100 -16.1 -4.4874 | overlap 2521658 CTCGCTTCATGTCGG GCGCCGGCT TCA GGCCGGCGC TTTTCAATTTTTACG TERM 2661 2521949 - 2521989 + G 76 -13.8 -3.14881 | TCGGCGGGCGTTCCG GCCGCGTCCGCCAGCTCG CGGGC CGCGCTGACGGCGGCGGC TTCCTCCGCGCCTTA TERM 2662 2522048 - 2522019 - g 84 -12.9 -3.77464 | gap 1 ACACCATTCACGAAA CGCGAACCGCCGAC GGC GTCA-CGGTCCGCG AATATGAATCGGCGG Bphy_2248 2521850 - 2522305 + | hypothetical protein Bphy_2249 2522302 - 2523792 + | hypothetical protein TERM 2663 2523827 - 2523855 + T 100 -12.5 -4.88407 | gap 1, opp_overlap 2523827 TGCGCCAGCAACCAA CGGCGGATCGGC GTGCAA GCC-ATCCGCCG TTTTTCATTGCATAC TERM 2664 2523855 - 2523827 - T 79 -12.5 -3.39895 | gap 1, opp_overlap 2523827 TGCGCCAGCAACCAA CGGCGGATCGGC GTGCAA GCC-ATCCGCCG TTTTTCATTGCATAC Bphy_2250 2524103 - 2523804 - | hypothetical protein TERM 2665 2523917 - 2523890 - G 71 -12.6 -3.21276 | opp_overlap 2523898 2523899, overlap 2523888 2523891 CGCCCGTGCACAACA GCGCAGCGGCGA TGCA CCGGCGCCGCGC CCGCGACGCCGACGC TERM 2666 2523898 - 2523937 + g 74 -11.2 -3.5594 | opp_overlap 2523890 2523891 2523888, overlap 2523899 CACAACAGCGCAGCG GCGATGCACCGGCGCCGC GCCC GCGACGCCGACGCGTCGG TTTGCACGCTCCGTT TERM 2667 2523899 - 2523936 + g 75 -14.7 -2.73243 | opp_overlap 2523890 2523891 2523888, overlap 2523898 ACAACAGCGCAGCGG CGATGCACCGGCGCCGC GCCC GCGACGCCGACGCGTCG GTTTGCACGCTCCGT Bphy_2251 2524214 - 2525515 + | urea ABC transporter, urea binding protein TERM 2668 2525587 - 2525558 - f 80 -14.3 -2.75382 | opp_overlap 2525566 2525572, overlap 2525555 GAGGTCATGCAACGA GCGGTGCGCCA TGTGCGGG CGGCGCACCGC GCCGGCCTGCTGGTC TERM 2669 2525572 - 2525597 + F 80 -14.7 -2.74523 | gap 1, opp_overlap 2525558 2525555, overlap 2525566 AGCGGTGCGCCATGT GCGGG-CGGCGC ACC GCGCCGGCCTGC TGGTCTTGCCGATCC TERM 2670 2526010 - 2525983 - g 72 -11.2 -3.53012 | CTGTTGCGCTCGAAA GTTGCGGGCGCG CTGT CGGGCCTGCAAC TCGACTCGCCCGATT TERM 2671 2526807 - 2526819 + G 81 -9.1 -4.21908 | GCCGTACAACCGGCT CGCGA TTC TCGCG TTTTCGCTGATCGTC Bphy_2252 2525629 - 2527260 + | urea ABC transporter, permease protein UrtB TERM 2672 2527364 - 2527405 + G 72 -11.5 -3.45324 | gap 1, overlap 2527363 2527365 GGTTTCGCGCTCGGC CTGCCGCCGCGCCCCGCG CTGCTGT CGCGGCGCGCG-TGGCAA TGTTTGATCGCACTG TERM 2673 2527365 - 2527404 + G 75 -15 -2.66873 | gap 1, overlap 2527364 2527363 GTTTCGCGCTCGGCC TGCCGCCGCGCCCCGCG CTGCTGT CGCGGCGCGCG-TGGCA ATGTTTGATCGCACT Bphy_2253 2527262 - 2528458 + | urea ABC transporter, permease protein UrtC Bphy_2254 2528455 - 2529318 + | urea ABC transporter, ATP-binding protein UrtD Bphy_2255 2529387 - 2530079 + | urea ABC transporter, ATP-binding protein UrtE Bphy_2256 2530116 - 2530997 + | urease accessory protein UreD TERM 2674 2531492 - 2531548 + G 70 -6 -4.26344 | gap 3, opp_overlap 2531485 2531491 2531492 2531539 CTGCAAACCAACAAG GTCGATCTCGTGATCTCGTCGCTCGGC AAGACA GCAGAGCG-CGAGA--AGGTGATCGAC TTTTCGTCCGCCTAT TERM 2675 2531740 - 2531725 - g 72 -8.2 -3.9644 | opp_overlap 2531725, overlap 2531719 CTTCGAAGACAACAA CGCGAC CATC GCCGCG TTCCTGTCGGGCCAG Bphy_2257 2531192 - 2531992 + | extracellular solute-binding protein Bphy_2258 2532111 - 2532413 + | urease, gamma subunit Bphy_2259 2532424 - 2532729 + | urease, beta subunit TERM 2676 2533665 - 2533643 - g 72 -12.7 -3.14647 | gap 1 ACGTATCATACGGAA GGCGCG-GGC GGCG GCCACGCGCC CGACATCATCAAGGT TERM 2677 2533987 - 2533966 - g 73 -12.3 -3.41745 | gap 1, overlap 2533967 TGCGCACAAGATGAA GGTGCAGCGC GGC GCGCTGC-CC GAGGACAGCACGCGC Bphy_2260 2532818 - 2534524 + | urease, alpha subunit Bphy_2261 2534526 - 2535212 + | UreE urease accessory domain-containing protein Bphy_2262 2535199 - 2535879 + | urease accessory protein UreF TERM 2678 2536443 - 2536461 + G 71 -8 -4.18401 | CGTCCGATGCTGCCA GGATGCGC GGC GCGCGGCC TTTTGCGATGTGTAA Bphy_2263 2535905 - 2536546 + | urease accessory protein UreG TERM 2679 2536560 - 2536573 + T 91 -8.1 -5.08824 | overlap 2536555 GAGGTTTTTTGTCTG CGACG CGGT CGTCG TTTTTTGCCTGCAGC Bphy_2264 2537920 - 2536613 - | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein TERM 2680 2537595 - 2537565 - G 78 -7.4 -4.3739 | overlap 2537566 CATGCCTTCAGAAAA CGCCGCACGGCGCG GGG CATGTCGTACGGCA GATAGCAGCGCAACA TERM 2681 2537959 - 2537994 + r 81 -15.4 -2.52464 | gap 1, opp_overlap 2537947 2537960 GAAGCGCACGATGAC ACGCGACGACGCCGCAG CTG CCGCGGCGTC-TCGCGA TGCATTGGACGGAAC TERM 2682 2537993 - 2537960 - R 100 -21.1 -2.83012 | gap 1, opp_overlap 2537959, overlap 2537947 AAGCGCACGATGACA CGCGACGACGCCGCAG CTG CCGCGGCGTC-TCGCG ATGCATTGGACGGAA Bphy_2265 2538908 - 2538024 - | hypothetical protein TERM 2683 2538387 - 2538422 + g 70 -13.8 -2.63348 | opp_overlap 2538363, overlap 2538386 CATGTCCTCGAACGG CTCGCCGACGCGCCAC ACGC GCGGCGCGCCAGCGGG ATTGATGTTCGTGAA TERM 2684 2538694 - 2538641 - G 75 -14.5 -2.74019 | gap 1, opp_overlap 2538680 2538686, overlap 2538631 GATAACGCGCAATCA GCGCGC-GCACGGCCGACTGCGTGAT GGC ATCGCCCAGCACGCCATGCAGCGCGC CGCCGTTCGGCGCGA TERM 2685 2538990 - 2538933 - R 80 -10 -3.95219 | gap 3, overlap 2538924 TTCAAAGCGGATAAA GCCG-CGTCACAGCAGGCCGAAG-CCG GTCAGCG CGGACTTCA-CCTGCTGCAGCGTCGGC GGCTGGCCCGCCGTG Bphy_2266 2540081 - 2538939 - | lipopolysaccharide heptosyltransferase I TERM 2686 2540006 - 2540036 + g 81 -4.7 -4.87665 | overlap 2540013 TTTTAGCGCGGTCCT TCGC-ACGCGCGCGG ATT CCG-GCGTTTCGCGA TTTTTCTGGCTGCAC TERM 2687 2540478 - 2540454 - R 100 -11.5 -5.52384 | overlap 2540473 CCGCGAGCAAAAAAA CGACGCCTT GAGGTGA AAGGCGTCG CACACAGCTTGAAAA Bphy_2267 2541902 - 2540508 - | phosphomannomutase TERM 2688 2542972 - 2542997 + G 91 -17.7 -3.26319 | TCACGCTGGCGCTGA TGCTGGCGCAA ACGC TTGCGCCAGCA TTCGTCTACCGCGTT Bphy_2268 2542149 - 2543411 + | polysaccharide biosynthesis protein TERM 2689 2543709 - 2543666 - g 80 -14.5 -3.05596 | gap 1, opp_overlap 2543668 2543670 CAGGCGGGCATCGAA GCGCTCGCGGCGCGCGGCTT TCGCT ACGCCGCGCGCATCGA-CGC CGGCGACCTGACTGT Bphy_2269 2543408 - 2544244 + | glycosyl transferase family protein Bphy_2270 2544275 - 2545447 + | glycosyl transferase group 1 Bphy_2271 2545459 - 2546481 + | UDP-glucose 4-epimerase TERM 2690 2546567 - 2546588 + F 73 -2.9 -4.87133 | gap 1, overlap 2546565 2546569 2546587 CCGATCCGGCGATTG CA-GCGCGAG TGC CGTGCGCATG TTTTGTTTCACGCGT Bphy_2272 2546941 - 2548263 + | FAD linked oxidase domain-containing protein Bphy_2273 2548260 - 2549000 + | short-chain dehydrogenase/reductase SDR Bphy_2274 2548997 - 2549410 + | hypothetical protein Bphy_2275 2549643 - 2551064 + | UbiA prenyltransferase Bphy_2276 2551180 - 2552229 + | hypothetical protein TERM 2691 2553437 - 2553465 + G 93 -5.1 -5.4505 | overlap 2553438 GCTGACGCTCATCGC GCTGCATGGCGCG AGC CGCTTCACGCAGA TTTTTTCTTCGGCCA Bphy_2277 2552370 - 2553599 + | hypothetical protein Bphy_2278 2554050 - 2554253 + | PST family polysaccharide export protein Bphy_2279 2554906 - 2555163 + | hypothetical protein Bphy_2280 2555175 - 2555543 + | hypothetical protein Bphy_2281 2555723 - 2556778 + | acyltransferase 3 Bphy_2282 2557929 - 2556868 - | hypothetical protein TERM 2692 2558852 - 2558802 - g 72 -8.9 -4.00042 | gap 2 CTGCCCACGAAAGAA CGGC-TCGACCGCTGCACGA-GCGA TTC CCGCGTCGTGCTGGAGCCGGCGCCG CGCAATACCGCCCCC Bphy_2283 2558502 - 2560043 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2693 2561042 - 2561016 - f 90 -10.1 -4.56597 | gap 1 GCGCGTGCCGAAAAA CAGCCGTGTGGC GCAC GCCCC-CGGCTG CAGGAGACTCGTTAC Bphy_2284 2561118 - 2562122 + | glycosyl transferase family protein TERM 2694 2562526 - 2562538 + F 81 -3.3 -5.2189 | opp_overlap 2562522, overlap 2562519 ATGGTCCACAATCGG CTTCC GAA GGATG TTTTTTCCTGCTTCA Bphy_2285 2562602 - 2562886 + | hypothetical protein TERM 2695 2562909 - 2562889 - f 79 -13.9 -3.08679 | GCCCCCGACCTAACA CTGGGCGCG CAT CGCGCCCCG ATGGACTTAGGAGCC Bphy_2286 2563496 - 2564068 + | hypothetical protein Bphy_2287 2566084 - 2564495 - | methyl-accepting chemotaxis sensory transducer TERM 2696 2566375 - 2566402 + G 70 -14.1 -2.64416 | opp_overlap 2566365 2566364, overlap 2566374 GAAATTCCATGCGCG GCCCGTGCCGC GCATCG GCGGGACGGGC ATTCTGATCGGACTG Bphy_2288 2566250 - 2567350 + | glycosyl transferase family protein TERM 2697 2567494 - 2567507 + T 100 -9.5 -4.88407 | opp_overlap 2567494 ACAGACATGAAAAAA GGCGC CTCG GCGCC TTTTTCGTTACATCA TERM 2698 2567507 - 2567494 - T 100 -9.5 -5.25893 | opp_overlap 2567494 ACAGACATGAAAAAA GGCGC CTCG GCGCC TTTTTCGTTACATCA TERM 2699 2567533 - 2567581 + T 73 -12.5 -2.75992 | opp_overlap 2567524, overlap 2567531 2567539 CATCAATGCCCGCTT GCC--CGCTGGCGGCGGCACGCTGC GCA GCGGCG-GC-GCGGCCAGCGTCGGC TGATATTCGGTAACC Bphy_2289 2569404 - 2567515 - | polysaccharide biosynthesis protein CapD TERM 2700 2567617 - 2567599 - G 70 -13.8 -2.53015 | opp_overlap 2567598 2567597 ATATTCGGTAACCCA GCGCCGCA GAT CGCGGCGC ACTTCGTCGTCCGTC Bphy_2290 2570438 - 2569410 - | glycosyl transferase family protein TERM 2701 2569845 - 2569835 - G 84 -6.8 -4.82901 | CGTCGCCGAGAAAAA TCCG CGC CGGA TGAAAATTGAAGAAC TERM 2702 2570056 - 2570040 - G 75 -2.9 -4.79223 | CCAGATCATCAAAAA TGCCAGC ACG ACCAGCA CCCACCACGGCGCCG Bphy_2291 2571402 - 2570446 - | NAD-dependent epimerase/dehydratase TERM 2703 2570560 - 2570503 - G 74 -13 -3.28712 | TTCGTCGGTTGAGAA CGGCGGT-TGCCAGC-CGAGGACGTCGC GTATGT GCGACGTA-TCGAGCTG-CAGACCGCCG ATCAGACGGTCAACT TERM 2704 2570763 - 2570719 - G 74 -11.4 -3.59979 | GTCCGCGACGTGAAA GCACTGGTGCGCCGCGCG CGGATCGGT CGCGCAACACATCAGCGC GTCCGCCAGGTTGCC TERM 2705 2571121 - 2571071 - G 84 -12.6 -3.95022 | gap 3, opp_overlap 2571068 2571113, overlap 2571064 CTGACGAACACGAAA CG-CGGCACGCCG-TGCTC-CCGTG CGGC CGCGGCGAGCCGCAGCGTGCCGTCG ACATTGGTGGCACGG Bphy_2292 2572244 - 2571399 - | glycosyl transferase family protein TERM 2706 2572330 - 2572341 + H 72 -5.8 -4.42851 | overlap 2572322 GGAAAATGCGAGGAT TCGG CAAC CCGA TTTTCGCTTTGTTAC TERM 2707 2572492 - 2572524 + H 88 -11.1 -4.1711 | TGCCCTCGCCCACGC GCGAGAGCGACGCCG GGC CGGCGTTTCCCACGC TTTATTCAGCGTGAT TERM 2708 2573601 - 2573585 - g 83 -2.2 -5.12068 | overlap 2573586 GATAGCCAACAAAAA GGACGT CCAGC ACGTCA AGAAAATTGTCGAAA Bphy_2293 2572569 - 2574002 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2709 2574267 - 2574255 - g 71 -9.1 -3.74693 | opp_overlap 2574255 CTTTATCTGACGAAA GGCCA TTT TGGCC TTTTCTACGGCCGCG TERM 2710 2574255 - 2574267 + G 83 -9.1 -4.36914 | opp_overlap 2574255 CTTTATCTGACGAAA GGCCA TTT TGGCC TTTTCTACGGCCGCG Bphy_2294 2574150 - 2574608 + | GtrA family protein Bphy_2295 2574924 - 2576054 + | glycosyl transferase family protein Bphy_2296 2576110 - 2578008 + | glycosyl transferase family protein Bphy_2297 2578005 - 2578937 + | NAD-dependent epimerase/dehydratase TERM 2711 2579052 - 2579024 - f 71 -11.8 -2.87683 | gap 2, opp_overlap 2579028 AGACCCGGTGAGACA GGCAT-CCGG-CCG CTC CGGACCGGCATGCC TTGCCGCGACCCGGA TERM 2712 2579161 - 2579183 + F 74 -2 -4.94243 | gap 1, overlap 2579159 2579162 AATCTGGCGTATTCG GCGGACGGA CGCTGT TCCGTT-GC TTTTGCTTTTTTTGC TERM 2713 2579996 - 2580017 + G 73 -5.8 -4.3487 | GCCGCGCTCGATCCG GCAGGCGT ATTGCC AAGCCTGC TTTTCCCTTATGTGT TERM 2714 2580690 - 2580676 - g 75 -3.5 -4.82901 | CTTCCTGCAGAAAAA CGTCG GACTG CAACG CATCTATTCGCTTGG Bphy_2298 2579180 - 2581789 + | hypothetical protein TERM 2715 2581957 - 2581923 - g 81 -12.1 -3.84406 | TGTCTACGACAACAA CTCGCGCGACAACAC GTCAA GCGTTGCCGCGCAGG CGGGCGCCGTCGTGC TERM 2716 2582473 - 2582487 + G 70 -2.1 -4.63184 | opp_overlap 2582420 AAGCTGATCCGTCAC GAACG GCCAA TGTTC TTTTTCACGTGCATT Bphy_2299 2581801 - 2582799 + | glycosyl transferase family protein Bphy_2300 2584180 - 2583062 - | acyltransferase 3 Bphy_2301 2586114 - 2584363 - | hypothetical protein Bphy_2302 2587101 - 2586274 - | hypothetical protein TERM 2717 2586662 - 2586650 - G 72 -3.3 -4.63218 | opp_overlap 2586650, overlap 2586651 GGCGCGTGAACAAAA TGACG AAA CGTCG TATAATCCTTCTTGA TERM 2718 2586834 - 2586815 - G 74 -5 -4.51174 | gap 1, overlap 2586816 TGACCATAAGTAAAA TGCCCGGAC ACC ATCCGG-CA CCGAGCCATACGGCG Bphy_2303 2587482 - 2588405 + | hypothetical protein Bphy_2304 2588428 - 2589261 + | phytanoyl-CoA dioxygenase Bphy_2305 2590363 - 2589338 - | methyltransferase type 11 TERM 2719 2590437 - 2590401 - R 100 -18.2 -2.83894 | overlap 2590403 ATTACGAGTATGACA TATCGTTTCTGGCCGG AAACG CGGGCCAGAAACGATA TACGGGGTGACGTTC TERM 2720 2590435 - 2590403 - R 87 -16.4 -2.96692 | overlap 2590401 TACGAGTATGACATA TCGTTTCTGGCCGG AAACG CGGGCCAGAAACGA TATACGGGGTGACGT Bphy_2306 2591898 - 2590513 - | glycosyl transferase group 1 Bphy_2307 2593562 - 2591949 - | hypothetical protein TERM 2721 2592090 - 2592110 + g 70 -11.1 -3.35073 | ATGCTTTTGTTCTGT CAGTCGCTC GAT GAGCGCCTG TTGATTCAGAGTCGT Bphy_2308 2594659 - 2593562 - | DegT/DnrJ/EryC1/StrS aminotransferase Bphy_2309 2595154 - 2594744 - | WxcM domain-containing protein Bphy_2310 2596115 - 2595141 - | hypothetical protein Bphy_2311 2596795 - 2596118 - | hexapaptide repeat-containing transferase Bphy_2312 2597554 - 2596805 - | hypothetical protein TERM 2722 2596962 - 2596983 + g 71 -12.3 -3.21668 | overlap 2596963 2596967 TCGACCTTGTTGAAT TGGACGACG GGCG CGTCGTCCG TCTTCATGTAGTCCT TERM 2723 2596963 - 2596982 + g 70 -13.6 -2.52519 | overlap 2596962 2596967 CGACCTTGTTGAATT GGACGACG GGCG CGTCGTCC GTCTTCATGTAGTCC TERM 2724 2596967 - 2596985 + g 73 -12.4 -3.31157 | overlap 2596963 2596962 CTTGTTGAATTGGAC GACGGGCG CGT CGTCCGTC TTCATGTAGTCCTTG Bphy_2313 2598937 - 2597585 - | ABC transporter related Bphy_2314 2599784 - 2598927 - | ABC-2 type transporter TERM 2725 2599824 - 2599854 + r 83 -14.6 -3.08798 | overlap 2599817 TTCAATCGTGATCGC GGGCAGCGCGGCCA ATT TGCCTGCGCCGCCC TGTTACATCCACACT Bphy_2315 2600852 - 2599941 - | rhamnosyltransferase TERM 2726 2600036 - 2600071 + g 72 -8.2 -4.11216 | gap 1, opp_overlap 2600036 2600034 GGAAGAACGAATAGA CCAC-GAGCCGGACGGG CAG CTTGACCAGCTCCGTGG TTTTCCAGCTCCACG TERM 2727 2600824 - 2600795 - G 93 -6.3 -5.40072 | gap 1 CCGGGTTGAAAAAAA CGACCACCGCACCG GCA CGGGGC-GCAGCCG ATGTCTGCGTCAAGG Bphy_2316 2601727 - 2600834 - | dTDP-4-dehydrorhamnose reductase Bphy_2317 2602286 - 2601735 - | dTDP-4-dehydrorhamnose 3,5-epimerase Bphy_2318 2603164 - 2602271 - | glucose-1-phosphate thymidylyltransferase TERM 2728 2602662 - 2602679 + g 70 -2.5 -4.67982 | overlap 2602664 GTCACTGCGTAGTTC GAGCGCG GCTT CGCGGGC TTTTCTTCGATCGAC TERM 2729 2603175 - 2603193 + r 74 -11 -3.51232 | overlap 2603170 2603176 GCCATCGTTCCGCCC TTACGCGC GTT GCGCGTAG TTCGTTTCGACCCAC Bphy_2319 2604236 - 2603175 - | dTDP-glucose 4,6-dehydratase Bphy_2320 2605338 - 2604436 - | NAD-dependent epimerase/dehydratase Bphy_2321 2605714 - 2606562 + | bis(5'nucleosyl)-tetraphosphatase, ApaH Bphy_2322 2607428 - 2606577 - | phospholipid/glycerol acyltransferase Bphy_2323 2608756 - 2607479 - | dihydroorotase, multifunctional complex type Bphy_2324 2609838 - 2608798 - | aspartate carbamoyltransferase Bphy_2325 2610418 - 2609906 - | phosphoribosyltransferase Bphy_2326 2610860 - 2610405 - | Holliday junction resolvase YqgF Bphy_2327 2611432 - 2610857 - | hypothetical protein TERM 2730 2611568 - 2611550 - R 70 -3.8 -4.56775 | overlap 2611551 ACGCCGCGCGAAAAA CGCAGTCC ATG AAACTGCA CTCTATCATGCGCCT TERM 2731 2611660 - 2611682 + r 100 -12.7 -5.60993 | gap 1, opp_overlap 2611644 CGTCCCGATGCGATG CGGGC-CGGG TTCG CCCGTGCCCG TTTTTTTATGCGCGG Bphy_2328 2613097 - 2611688 - | hypothetical protein TERM 2732 2612812 - 2612851 + g 72 -12.7 -3.14132 | gap 1, opp_overlap 2612834 CGAGCGCCTTGCTGA ACGCCCGCAGCGCACCGC CAAAC GCAGCGCGC-GCGGGCGC TTCGTCGGGCAGGCC Bphy_2329 2613378 - 2613094 - | hypothetical protein Bphy_2330 2613630 - 2613460 - | rubredoxin-type Fe(Cys)4 protein TERM 2733 2613818 - 2613865 + H 75 -10.5 -3.64703 | opp_overlap 2613813, overlap 2613819 GCATAATTGAGCCGT C-TGTGCAGGCCGCGCGGACGCG TGTG CGCG-CCGAACGGCCTGCGAATG TTTCGCTCAACGACC TERM 2734 2613819 - 2613863 + H 87 -14.2 -3.40597 | gap 1, opp_overlap 2613813, overlap 2613818 CATAATTGAGCCGTC TGTGCAGGCCGCGCGGACGCG TGTG CGCG-CCGAACGGCCTGCGAA TGTTTCGCTCAACGA Bphy_2331 2613894 - 2614754 + | phosphomethylpyrimidine kinase type-1 TERM 2735 2614927 - 2614937 + F 72 -4.6 -4.56597 | ACCTCGTCAGATGCC TGCG CCG CGCG TTTTTACCGCAACGC Bphy_2332 2615093 - 2615752 + | adenylyl-sulfate kinase TERM 2736 2615828 - 2615801 - T 100 -17.2 -4.33675 | opp_overlap 2615801 2615807, overlap 2615807 ACCAGAGCACCAAAA GAAAAACCCGCA TCGC TGCGGGTTTTTC TTTTTTTGGCACGGG TERM 2737 2615801 - 2615828 + T 100 -17.2 -5.40072 | opp_overlap 2615801 2615807, overlap 2615807 ACCAGAGCACCAAAA GAAAAACCCGCA TCGC TGCGGGTTTTTC TTTTTTTGGCACGGG TERM 2738 2615822 - 2615807 - T 100 -10.4 -5.50723 | opp_overlap 2615801 2615807, overlap 2615801 GCACCAAAAGAAAAA CCCGCA TCGC TGCGGG TTTTTCTTTTTTTGG TERM 2739 2615807 - 2615822 + T 100 -10.4 -5.86609 | opp_overlap 2615807 2615801, overlap 2615801 GCACCAAAAGAAAAA CCCGCA TCGC TGCGGG TTTTTCTTTTTTTGG Bphy_2333 2617533 - 2615893 - | chaperonin GroEL Bphy_2334 2617868 - 2617578 - | chaperonin Cpn10 TERM 2740 2617776 - 2617809 + g 74 -11.7 -3.58162 | overlap 2617772 ATCCGGCTTTTCTGC GGCTGCGTCGGGAAT CACG ATGCCCGATGCGGTC TTGGTTTCCTGATCC Bphy_2335 2618401 - 2619231 + | putative GAF sensor protein Bphy_2336 2620679 - 2619651 - | hypothetical protein TERM 2741 2620937 - 2620961 + r 79 -12.9 -3.28712 | opp_overlap 2620935 GCGCGACACATTACC GTGGGGTGGAT GAC ATCCACGCCAC TTATCCGCACGCCCC TERM 2742 2621011 - 2620987 - R 100 -15.8 -5.93809 | opp_overlap 2620987 GCCCCAGAAAAAAAA TCGCCAGCAC GCGAG GTGCTGGCGA TTATCGACAACGCGC TERM 2743 2620987 - 2621011 + r 89 -15.8 -3.28712 | opp_overlap 2620987 GCCCCAGAAAAAAAA TCGCCAGCAC GCGAG GTGCTGGCGA TTATCGACAACGCGC Bphy_2337 2622437 - 2621040 - | major facilitator transporter TERM 2744 2621822 - 2621848 + g 73 -5.7 -4.37092 | opp_overlap 2621800 2621798 2621820, overlap 2621823 GCGTCACGATGAAGC TGCGCAGCGCC TGTGC GCCGCTGCCCG TTTTCTGCCCGAGAT TERM 2745 2621937 - 2621880 - G 71 -9.6 -3.78934 | gap 2, overlap 2621882 CCTGGCCCAGAAGAA CAGCGCGACGGCAGCGAGGCCCAGCAGC GGCA GC-GCGGCGCC-CGCAGCCTTCGCCCAG CCGAAATGATCGGCA Bphy_2338 2623290 - 2622490 - | methyl-accepting chemotaxis sensory transducer TERM 2746 2623634 - 2623617 - R 93 -12.7 -4.4078 | GTCCGCCAATGAAAA GCGCCCT TTTC AGGGCGC TTGCGCGCGCCTCAA Bphy_2339 2624901 - 2623705 - | monosaccharide-transporting ATPase Bphy_2340 2626475 - 2624898 - | D-xylose ABC transporter, ATPase subunit TERM 2747 2626546 - 2626500 - R 100 -17.4 -3.76224 | opp_overlap 2626498, overlap 2626502 2626503 CCTGGATGGATGAAA GATGCGCGGGCGCTTCC-CGTC ACGAA GACGAGGAAGCGCCCGTGC-CC GCTATCAGTTGCCAG TERM 2748 2626545 - 2626502 - R 100 -18.9 -3.46647 | gap 1, opp_overlap 2626498, overlap 2626500 2626503 TGGATGGATGAAAGA TGCGCGGGCGCTTCC-CGTC ACGAA GACGAGGAAGCGCCCGTGCC CGCTATCAGTTGCCA TERM 2749 2626544 - 2626503 - R 100 -22.4 -2.67667 | gap 1, opp_overlap 2626498, overlap 2626502 2626500 GGATGGATGAAAGAT GCGCGGGCGCTTCC-CGTC ACGAA GACGAGGAAGCGCCCGTGC CCGCTATCAGTTGCC Bphy_2341 2627579 - 2626551 - | D-xylose ABC transporter, periplasmic substrate-binding protein TERM 2750 2626637 - 2626656 + g 71 -9.2 -3.6968 | GCAGCGTCGGTTGCA GCAGGACG GTAT CGACCTGC TTCTTGCCGTTGTCG TERM 2751 2626893 - 2626917 + g 93 -14.3 -4.09963 | overlap 2626895 GCCTGCCGTGCCGTC GTTCGACGCGA CGA TCGCGTCGATC TTGTTGTTGTTCGCA TERM 2752 2626895 - 2626915 + g 90 -15.5 -3.63645 | overlap 2626893 CTGCCGTGCCGTCGT TCGACGCGA CGA TCGCGTCGA TCTTGTTGTTGTTCG TERM 2753 2627432 - 2627413 - G 75 -10 -3.90112 | overlap 2627415 GCTGCCGCAACGAAA TAGTCGCG ATCG CGCGACCA GCGCTCGACGCGCAG Bphy_2342 2629118 - 2627793 - | xylose isomerase TERM 2754 2630156 - 2630138 - g 74 -10.2 -3.76402 | opp_overlap 2630141 AGGGCACCGAGGAAA TGGGCCGC ACC GCGGCGCA CCTGCTGCATCAGAT Bphy_2343 2629396 - 2630640 + | AraC family transcriptional regulator Bphy_2344 2630663 - 2631754 + | aldose 1-epimerase TERM 2755 2632700 - 2632678 - g 77 -12.6 -3.65522 | GACGCAGCTGAACAA GCGCCGCACC ATC GGCGCGGTGC TGGTGCTCGGGTCCA Bphy_2345 2632001 - 2632747 + | PepSY-associated TM helix domain-containing protein TERM 2756 2632818 - 2632783 - T 70 -3.8 -4.59109 | opp_overlap 2632788 2632790, overlap 2632788 CAGACGCTGGAAAAA CCGAAGAGCGATGCGC GATG GCGCGTCGCCCTTTTC GTTGTGCCGCTTGCC TERM 2757 2632813 - 2632788 - T 79 -12.5 -3.45031 | opp_overlap 2632788 2632790, overlap 2632783 GCTGGAAAAACCGAA GAGCGATGCGC GATG GCGCGTCGCCC TTTTCGTTGTGCCGC TERM 2758 2632788 - 2632813 + T 100 -12.5 -4.48987 | opp_overlap 2632783 2632788, overlap 2632790 GCTGGAAAAACCGAA GAGCGATGCGC GATG GCGCGTCGCCC TTTTCGTTGTGCCGC TERM 2759 2632790 - 2632811 + T 74 -13.7 -2.56864 | opp_overlap 2632788 2632783, overlap 2632788 TGGAAAAACCGAAGA GCGATGCGC GATG GCGCGTCGC CCTTTTCGTTGTGCC Bphy_2346 2633612 - 2632839 - | short-chain dehydrogenase/reductase SDR TERM 2760 2633818 - 2633797 - g 86 -9.3 -4.45945 | opp_overlap 2633808, overlap 2633809 2633810 AGTCAGCAAGGAAAA GGCGGCGCA AAAC CGCGCGGCC CTCGTCCAAACGGCC TERM 2761 2633839 - 2633809 - g 79 -10.3 -4.0896 | opp_overlap 2633808, overlap 2633797 2633810 AAAGGCGGCGCAAAA CCGCGCGGCCCTC GTCCA AACGGCCGCGCGC CTGTTCCGTGAACGC TERM 2762 2633838 - 2633810 - g 76 -13.8 -3.04894 | opp_overlap 2633808, overlap 2633797 2633809 AAGGCGGCGCAAAAC CGCGCGGCCCTC GTCCA AACGGCCGCGCG CCTGTTCCGTGAACG TERM 2763 2634079 - 2634065 - g 95 -7.8 -5.06414 | TTGTCGGAAGAAAAA CGCGAC GAC ATCGCG AACGGCTGCGCGCTG Bphy_2347 2633777 - 2634361 + | TetR family transcriptional regulator TERM 2764 2634441 - 2634403 - f 91 -8.1 -5.08088 | gap 2, overlap 2634404 AACCTGCAACAAAAA CGCG-ACGC-GATCCGCGC ATA GCGCACATCCGCGAGCGCG ACGCCTTGAACTCGC Bphy_2348 2634464 - 2634859 + | hypothetical protein TERM 2765 2634903 - 2634888 - T 100 -11.8 -5.59879 | CATAAAGATAAAAAA GCCCGC TTAC GCGGGC AACCTTCTACCAGGA Bphy_2349 2635788 - 2634937 - | binding-protein-dependent transport systems inner membrane component Bphy_2350 2636756 - 2635803 - | binding-protein-dependent transport systems inner membrane component Bphy_2351 2638092 - 2636827 - | extracellular solute-binding protein Bphy_2352 2640141 - 2638159 - | Beta-galactosidase Bphy_2353 2641304 - 2640153 - | ABC transporter related TERM 2766 2641389 - 2641373 - H 100 -10.1 -5.12617 | opp_overlap 2641372 2641385 GAATGACCGAAAAAA CGACCGC TAG GCGATCG CTGGTCTTTCTGAAG TERM 2767 2641555 - 2641582 + G 74 -11.2 -3.56092 | gap 1, opp_overlap 2641549 TTGAGCGAAGTCGCG CGGCGCGCCGGCG TCA CGTCGGC-CACCG TTTCGAACGTGCTGC TERM 2768 2642191 - 2642175 - g 91 -9.3 -4.72272 | GGTGCTCACGAAAAA CGTGCGC TAC GCGCCCG ATACGATCGAAGGCG Bphy_2354 2641531 - 2642565 + | LacI family transcription regulator Bphy_2355 2642850 - 2643833 + | MerR family transcriptional regulator TERM 2769 2643854 - 2643827 - T 86 -12 -4.07568 | gap 1, opp_overlap 2643853 GTGGGTGCTGGAAAA CCG-CTGAGCGTG CAC CACGCACAGGCGG CCCATCGGCTGCGCG Bphy_2356 2644853 - 2643894 - | diguanylate cyclase with GAF sensor TERM 2770 2644908 - 2644873 - R 75 -10.5 -3.63744 | gap 1, overlap 2644871 GGTCCGGTTAAAACA CGA-ACGCGCGATGCT GGTTT AGCACCCCGCGTGTCG CCGCAGGTTGAACGG Bphy_2357 2646623 - 2645022 - | PAS/PAC sensor hybrid histidine kinase TERM 2771 2645993 - 2646034 + g 72 -11.5 -3.55444 | gap 1, opp_overlap 2645982 GCAACTGTTGCGTCA GCGTGG-TCGCCTTCGCGAC CGC GCCGCGGATGCGATCCAGGC TTTGCGCCATCACCG TERM 2772 2646741 - 2646710 - H 90 -10.8 -4.56597 | overlap 2646711 2646712 CTCCGGTTCGAAAAA GGCCACATCGGTCC GCGC GGACCGATGCGGAG TCGCAATATGCGTTG TERM 2773 2646740 - 2646711 - H 87 -14.3 -3.33744 | overlap 2646710 2646712 TCCGGTTCGAAAAAG GCCACATCGGTCC GCGC GGACCGATGCGGA GTCGCAATATGCGTT TERM 2774 2646739 - 2646712 - H 87 -17.8 -2.60032 | overlap 2646711 2646710 CCGGTTCGAAAAAGG CCACATCGGTCC GCGC GGACCGATGCGG AGTCGCAATATGCGT TERM 2775 2647581 - 2647606 + G 86 -13.3 -3.84825 | gap 1 GCGCGCATGCTGGGG CGCGCGG-ACGT GCT GCGTACCGCGCG TTTCGTGTCGGTGCA Bphy_2358 2647077 - 2648072 + | aldo/keto reductase Bphy_2359 2649495 - 2648440 - | alcohol dehydrogenase TERM 2776 2648863 - 2648880 + g 75 -6.9 -4.3739 | opp_overlap 2648863 GCCAAGCCCGTCAAA GACGACG TCTA CGCCGTC TTTTGTGAGGCGATG TERM 2777 2649844 - 2649820 - H 88 -17.1 -2.87881 | opp_overlap 2649816 2649816 TAACCTTGCCAGATA CCCGGGGCGTG AAG CACGCCCCGTG CAGACTTTAGTGCGA Bphy_2360 2650114 - 2650566 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 2778 2650627 - 2650652 + G 84 -11.8 -3.98826 | ACATCGTCCCAGGTG GGCGGCCTGC GCCAAA GCGGGCTGCC TTTATGCATTGATCG TERM 2779 2650716 - 2650759 + G 71 -12.4 -3.27298 | gap 1 GCGTCCTGCTGCTTA TGCCGCTCCTGGGCGAGACGG CAG CCGTATCGCTC-GAAGCGCCA TTCATGCTTGCCGCG Bphy_2361 2650598 - 2651038 + | hypothetical protein TERM 2780 2651226 - 2651193 - T 87 -15.3 -3.32022 | TGGCCGACAGATCAA CATCCAGTGTGGCCC GCCT GGACCACGCTGGACG CAACCACCACTGTGC Bphy_2362 2654882 - 2651247 - | 5-oxoprolinase (ATP-hydrolyzing) Bphy_2363 2656237 - 2654930 - | major facilitator transporter Bphy_2364 2657187 - 2656414 - | hypothetical protein TERM 2781 2657333 - 2657371 + H 86 -8.9 -4.58283 | gap 1, opp_overlap 2657332 CGAATGAATAGAATT TCTTAACGCATTCGCGGG TTTT CCCG-GATCGCGTTGAGA TTTTTGGAACAGTTC Bphy_2365 2657415 - 2658347 + | LysR family transcriptional regulator Bphy_2366 2659710 - 2658415 - | FAD dependent oxidoreductase Bphy_2367 2660471 - 2659713 - | ABC transporter related Bphy_2368 2661124 - 2660468 - | polar amino acid ABC transporter, inner membrane subunit TERM 2782 2660744 - 2660770 + g 88 -17.3 -3.12668 | opp_overlap 2660725 CCGCATGATCAGCGG GCCGCGCATGC CGATC GCGTGCGCGGC TTCGATCTGCCCGTG Bphy_2369 2661976 - 2661206 - | extracellular solute-binding protein TERM 2783 2661860 - 2661896 + g 78 -12.9 -3.53091 | overlap 2661861 GAACGGCACGCCCGT GGCCGTTGCGCCGACCT TGT AGGTCGGTTCGGCGGCA TTTGCGGCACCGGAT TERM 2784 2661861 - 2661895 + g 81 -16.4 -2.71712 | overlap 2661860 AACGGCACGCCCGTG GCCGTTGCGCCGACCT TGT AGGTCGGTTCGGCGGC ATTTGCGGCACCGGA TERM 2785 2661992 - 2662021 + H 78 -9.9 -3.97088 | overlap 2661995 GCATATCTCCGGGCA GGAGCCGGCGTGT CAAC ACGCGCCGGCTGA TTTCATGTTGTGACC TERM 2786 2661995 - 2662018 + H 88 -16 -3.0364 | overlap 2661992 TATCTCCGGGCAGGA GCCGGCGTGT CAAC ACGCGCCGGC TGATTTCATGTTGTG TERM 2787 2662797 - 2662833 + G 81 -16.5 -2.78384 | CGATCGCCGCACCCG TGATCGGCAGCCAGGGG CGT CCCGTGGCTGCCGTCCA TGTCGTGGCGCCCAC Bphy_2370 2662139 - 2662945 + | IclR family transcriptional regulator TERM 2788 2663388 - 2663411 + T 71 -12.4 -3.01712 | CGTCCTTTGGCATTC GCTCGGGAAG TCTA CTGCCCGAGC TCTTCGGCGAGCCCG Bphy_2371 2663824 - 2663399 - | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_2372 2664203 - 2663871 - | hypothetical protein Bphy_2373 2664482 - 2665639 + | fibronectin, type III domain-containing protein Bphy_2374 2665799 - 2666140 + | hypothetical protein Bphy_2375 2666624 - 2666247 - | hypothetical protein Bphy_2376 2668094 - 2667348 - | hypothetical protein TERM 2789 2667994 - 2667959 - G 74 -4.7 -4.56597 | gap 2 TCGCGCCGCCAAAAA TCAG-GGA-CGCGGCCG TTGC CGGCTGAGATCCACTGA AGAGAGCAGCGGCGA Bphy_2377 2670241 - 2668091 - | cellulose synthase (UDP-forming) TERM 2790 2668289 - 2668264 - G 71 -4.5 -4.50058 | opp_overlap 2668287, overlap 2668265 TACTGATAATTAAAA TGCCGCCGTTG TGCG CATCGTCGGCG ATCACTACCGGGACC TERM 2791 2670416 - 2670431 + G 77 -11.8 -3.65046 | opp_overlap 2670414, overlap 2670420 CGAATCCCAAAATGT GGCGCC GTGA GGCGCC TTGTTGGGCTCGCGG Bphy_2378 2670365 - 2671531 + | cellulase Bphy_2379 2673570 - 2671855 - | glucose-methanol-choline oxidoreductase Bphy_2380 2674504 - 2673665 - | binding-protein-dependent transport systems inner membrane component Bphy_2381 2675771 - 2674509 - | binding-protein-dependent transport systems inner membrane component TERM 2792 2675724 - 2675745 + g 71 -12.3 -3.20078 | overlap 2675722 2675740 TCGCAGTGATTTCTT GAGCTGGCG CGTG TGCCAGCTC TGTTGCTGTGAAGTA Bphy_2382 2676820 - 2675783 - | extracellular solute-binding protein Bphy_2383 2677947 - 2676856 - | spermidine/putrescine ABC transporter ATPase subunit Bphy_2384 2680630 - 2678132 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 2793 2678974 - 2678945 - G 84 -16.4 -2.89564 | GTCGTAGCCGAGATA GTCGGTCCGCGG TCCGCG CCGCGGACCGCC AAAGCAGTCCAGTTG Bphy_2385 2681807 - 2680902 - | LysR family transcriptional regulator TERM 2794 2682043 - 2682091 + r 78 -4.1 -4.96848 | gap 3 GTTTGCTCAGCCATT TCGAGAGCATCGT-C--TACCTCG ATCC CGAGATATCGCACGGTGCTTTCGA TTTTTGTATGGCCCA Bphy_2386 2682644 - 2682018 - | integrase family protein Bphy_2387 2683451 - 2682825 - | putative lipoprotein Bphy_2388 2684365 - 2683718 - | hypothetical protein Bphy_2389 2684960 - 2684562 - | hypothetical protein TERM 2795 2684933 - 2684917 - G 85 -7.9 -4.63486 | opp_overlap 2684916 2684917 AGCGCTGGAACAAAA CGCGCTT TCA ATGCGCG ATTCATTTCGTCACG Bphy_2390 2685407 - 2685150 - | hypothetical protein Bphy_2391 2685929 - 2685429 - | hypothetical protein TERM 2796 2685970 - 2685990 + H 76 -3.2 -5.0133 | opp_overlap 2685960, overlap 2685971 AGTCAGTGACGCCGT TGGCGCTA CTCGA TAGCTCCG TTTTTTGCCGAGATC TERM 2797 2686794 - 2686784 - g 79 -2.4 -5.00616 | overlap 2686786 TGGTTCGGCAAAAAA GAGC GCG GCGC CGCCACCGGCATCTG TERM 2798 2686910 - 2686933 + G 93 -5.8 -5.31877 | GGCGTCATGGGAATC GCCGGCCTCC TCGT GGCGCTCGGC TTTTTTATCATGCAT Bphy_2392 2686313 - 2687665 + | major facilitator transporter Bphy_2393 2688779 - 2687715 - | malate/L-lactate dehydrogenase TERM 2799 2689424 - 2689442 + G 70 -5.8 -4.24948 | ATTGGGCGCCCGACC GAGCCACG ACA CGAGGCGC TTTTCGATGTGATCG Bphy_2394 2688932 - 2689876 + | LysR family transcriptional regulator Bphy_2395 2691209 - 2690088 - | hypothetical protein TERM 2800 2691096 - 2691070 - G 70 -5.9 -4.2349 | gap 2 GCGCTATAGTCAAAA CGGTCCGCCACGA TGG TCGTAG-GG-CCG AGGGATGTGCAGCCC Bphy_2396 2692720 - 2691305 - | hypothetical protein Bphy_2397 2694541 - 2692823 - | sulphate transporter TERM 2801 2694607 - 2694567 - H 76 -6.8 -4.4267 | gap 1, overlap 2694560 2694568 CGGGAAAAGCCAAAA CGCACCAGGGAGTGCGACG CTGG CGTCGGG-TCCCTGATGCC GCGTGCAGAGCGCAA Bphy_2398 2695066 - 2695656 + | hypothetical protein TERM 2802 2695723 - 2695692 - T 74 -11.5 -3.53012 | overlap 2695693 GCGGCTCCGTCGAAA GCGACGCAGCTGC GCATGG GCGGCTGCGTCGG AACAAACGTACGGGC TERM 2803 2695722 - 2695693 - T 83 -15 -2.71712 | overlap 2695692 CGGCTCCGTCGAAAG CGACGCAGCTGC GCATGG GCGGCTGCGTCG GAACAAACGTACGGG Bphy_2399 2696591 - 2695779 - | ROK family protein Bphy_2400 2698218 - 2696632 - | glucose-6-phosphate 1-dehydrogenase TERM 2804 2697155 - 2697112 - G 74 -5 -4.52589 | overlap 2697145 CGTGCGCAGATAAAA CGGCACGCCCGCCCAACGCC AGTT GTCGATGAATACGCGCGCCG CCGCATAGGTCTCCG TERM 2805 2698107 - 2698160 + g 88 -17.4 -3.06261 | gap 3, opp_overlap 2698093 2698095 2698092 TGACGAGCGTGCACG GCGGCGC-GGGCCGCTTGCCCGCAGGG CCG CCC-GCTG-CATGCGGCCCCGCGCCGA TCTTGCAGCTTGCGG Bphy_2401 2701057 - 2698322 - | hypothetical protein TERM 2806 2700018 - 2700000 - G 72 -8.8 -4.03978 | opp_overlap 2699999 AATGCCGCATAGAAA GCATCGGC CTC GGCGATGC GTTGCGTAAAAAGGT TERM 2807 2700339 - 2700366 + g 84 -12 -3.967 | gap 1 TGGCCGGGATGCGTG CCGAGCA-GGCGT GTG ACGCCATGCACGG TTTCCTTCGTGAGTT Bphy_2402 2703087 - 2701162 - | glycogen debranching enzyme TERM 2808 2701355 - 2701318 - G 76 -9.7 -4.1552 | gap 1 GAGCGGCGCAAGAAA GCGCGAACG-CGCTGCGC CGA GTGCTGCGTCGTCCGGGC GTTGCACGCGCAGCC TERM 2809 2703199 - 2703221 + r 73 -12 -3.07935 | GTCTTGCGCGCTTGA GCCACTCCAG CAG CTGAAGTGGC TTCCGTGGCTCCAGT Bphy_2403 2704655 - 2703258 - | integral membrane sensor signal transduction histidine kinase TERM 2810 2703474 - 2703500 + g 71 -10.8 -3.62597 | CGCGTTCTTGCCGCG CTGGAACGGCGC CTT GAGCCGTTCGAG TTCTTCCGCGCTCAA TERM 2811 2704507 - 2704527 + g 93 -18.3 -3.31792 | opp_overlap 2704502 GCGCCGAACACGGCG GCCGCGCGT TCG ACGCGCGGC TTCTGCACATAGTGA Bphy_2404 2705419 - 2704652 - | two component transcriptional regulator Bphy_2405 2705730 - 2705437 - | hypothetical protein Bphy_2406 2705771 - 2706016 + | hypothetical protein Bphy_2407 2706064 - 2706420 + | hypothetical protein Bphy_2408 2706539 - 2707009 + | Ferritin Dps family protein TERM 2812 2707024 - 2707062 + F 76 -11.7 -3.32844 | AATTCTTCGCTGCTG TCAGGGCGCGAACGCA-CG TTT CGATGCGGCCGCGCCC-GA TTGTCAAATCACCCA TERM 2813 2707133 - 2707165 + F 100 -17.8 -3.78953 | opp_overlap 2707133 CGGCTTATCGGCAAA CGCCGCATGTATCG ACACA CGGTGCATGCGGCG TTTCCTGCTGCGCAT TERM 2814 2707165 - 2707133 - f 83 -13.4 -3.57144 | opp_overlap 2707133 CGGCTTATCGGCAAA CGCCGCATGTATCG ACACA CGGTGCATGCGGCG TTTCCTGCTGCGCAT TERM 2815 2708982 - 2708953 - g 89 -18.6 -2.90075 | GCTGGTGGAACGACA CGGCGACGGGCA CGGCAC CGCCCGTCGCCG CATCGCAGTGAGCCC Bphy_2409 2707542 - 2708993 + | RND efflux system outer membrane lipoprotein TERM 2816 2709639 - 2709604 - g 84 -6.9 -4.77165 | gap 2, overlap 2709605 2709608 TCGTCGACAAGAAAA CGAT-CCG-CGCGCCGT TCGC AGGGCGCGTCGGCATCA CGACGGTCAACCCGG Bphy_2410 2709093 - 2710244 + | RND family efflux transporter MFP subunit Bphy_2411 2710255 - 2713296 + | acriflavin resistance protein TERM 2817 2713382 - 2713371 - f 81 -3.6 -5.16969 | CAGACAAAAAACAAA GGAG CCAA CCCC AATGTTCAGCACCAC Bphy_2412 2713384 - 2714025 + | lysine exporter protein LysE/YggA Bphy_2413 2714910 - 2714026 - | transporter DMT superfamily protein TERM 2818 2714964 - 2714946 - H 70 -3.7 -4.57341 | overlap 2714933 AAGGGCGCGGAAAAA CCGCGCG AAAAA CAAGCGG GAAAAGCTTCGGCCA Bphy_2414 2715263 - 2716051 + | hypothetical protein Bphy_2415 2716355 - 2716101 - | hypothetical protein TERM 2819 2716444 - 2716432 - R 73 -3.3 -4.83615 | overlap 2716437 CACGGCGCACAAAAA CGAAG GTC CGTCG CCTATCGGCGAGGCA TERM 2820 2716597 - 2716623 + r 76 -12.2 -3.46602 | opp_overlap 2716597 2716618 GCAGCATCAAGCGAA GCGGGCTCCCTT CCT ACGAGAGCCCGC TTGTCATGTCAGCAG TERM 2821 2716623 - 2716597 - R 86 -14.4 -3.21695 | opp_overlap 2716597, overlap 2716618 GCAGCATCAAGCGAA GCGGGCTCCCTT CCT ACGAGAGCCCGC TTGTCATGTCAGCAG TERM 2822 2716699 - 2716643 - R 100 -19.3 -3.09834 | gap 1, opp_overlap 2716655, overlap 2716618 CATGTCAGCAGGCAA GCGCG-CCGCAACCGGCAGCGCGCCG TCCTTC CGGCGAGCGGCTGGCTGCCGCCGCGC GCGCAGATCGTGCAA Bphy_2416 2717101 - 2716745 - | transport-associated Bphy_2417 2717644 - 2719170 + | hypothetical protein TERM 2823 2719338 - 2719298 - f 73 -11.7 -3.04231 | overlap 2719295 2719301 AGATCGAAACAATCA GAATCGGCTGACGCGCGGC ATC GCCGACAGCCCGCCGATTC AGGCAACCGGGAGAC TERM 2824 2719324 - 2719301 - f 72 -9.6 -3.65135 | gap 1, overlap 2719298 2719295 TCGAAACAATCAGAA TCGGCTGACGC GCG GCATC-GCCGA CAGCCCGCCGATTCA Bphy_2418 2719357 - 2720001 + | DSBA oxidoreductase TERM 2825 2720909 - 2720851 - g 87 -18.2 -2.78384 | gap 3, opp_overlap 2720890 2720893 CGCCCGCGCATTACA GCGGCGCG-CGCGGCG-GCGCGATCGA CACGGGCT TCGCGCGCGCGCGC-GCGTCGCGCCGC ATCGTCGCGACGTTG TERM 2826 2721241 - 2721210 - g 100 -17.2 -5.75945 | overlap 2721192 ACGGCGGAAAAAAAA GCGGGCGCAGCCAG TGTG CCCGCCGCGCCCGC TGGAGGAAGCGGTCA Bphy_2419 2720232 - 2721260 + | LysR family transcriptional regulator Bphy_2420 2721852 - 2721262 - | xanthine dehydrogenase accessory protein XdhC Bphy_2421 2724232 - 2721875 - | xanthine dehydrogenase, molybdopterin binding subunit Bphy_2422 2725783 - 2724266 - | xanthine dehydrogenase, small subunit TERM 2827 2726687 - 2726699 + G 72 -3.3 -4.59773 | overlap 2726683 2726686 CGGCGTATGGATCTC GCACA GCG TGGGC TTTTTCGCGCTCGGG TERM 2828 2727011 - 2727026 + G 73 -6 -4.42639 | overlap 2727009 GTACGGCGGGTTTCG CGTCGC GATC GCGTCG TTTTCCTTCGAATGT Bphy_2423 2726169 - 2727380 + | major facilitator transporter TERM 2829 2727531 - 2727512 - T 78 -9.2 -3.96188 | AACCAGATGTACAAA GCGGATGC CCGC GCAGCCGC AAAAACCTCGTCCCA TERM 2830 2727577 - 2727558 - T 75 -8.6 -4.08485 | gap 1 CCCAGCGAAAGCAAA CCTGGCGAC TAC GTCGC-AGG CACAACAAAAAATCA Bphy_2424 2728810 - 2727590 - | aminotransferase class V TERM 2831 2727946 - 2727956 + g 72 -8.2 -4.10657 | opp_overlap 2727928 AGCACCTCAGATGCC GCGC GAA GCGC TTTTCCAGCGTCTCC TERM 2832 2728848 - 2728893 + r 88 -16 -3.13164 | opp_overlap 2728852, overlap 2728851 GTGAACGTTGCAGAA AAAAGGCCCGCCGCGCGCAG CAGCAC CTGCGGGCGGCGGGCCGTCG TTCGATCATTCACCC TERM 2833 2728851 - 2728890 + r 100 -22.1 -2.77235 | opp_overlap 2728852, overlap 2728848 AACGTTGCAGAAAAA AGGCCCGCCGCGCGCAG CAGCAC CTGCGGGCGGCGGGCCG TCGTTCGATCATTCA TERM 2834 2728889 - 2728852 - R 100 -25.6 -5.24531 | opp_overlap 2728851 2728848 ACGTTGCAGAAAAAA GGCCCGCCGCGCGCAG CAGCAC CTGCGGGCGGCGGGCC GTCGTTCGATCATTC Bphy_2427 2729881 - 2729621 - | hypothetical protein Bphy_2428 2730101 - 2731090 + | LysR family transcriptional regulator Bphy_2429 2731154 - 2732161 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_2430 2732751 - 2732194 - | hypothetical protein TERM 2835 2732881 - 2732901 + H 79 -13.3 -3.14422 | overlap 2732874 2732873 2732870 CGCCCCGTTCGCCAC GCATCGTCG CTT CGGCGATGC TGTTCGAGTTGTTTT Bphy_2431 2733033 - 2733911 + | enoyl-CoA hydratase/isomerase TERM 2836 2734403 - 2734432 + G 88 -9.9 -4.60041 | overlap 2734385 2734384 GTGCTGATGGCCGCG CGCATCGTGACCG CGTT CTGCCACGGTGCG TTTTTCGGCATCGGT Bphy_2432 2734112 - 2735269 + | major facilitator transporter TERM 2837 2735965 - 2735976 + G 72 -3.6 -4.62302 | overlap 2735963 ATGCCTGCGCTCGTG GTCG GGAC CGGC TTTTTCGCGCTGTTC TERM 2838 2736475 - 2736501 + G 80 -15.8 -2.90496 | opp_overlap 2736476, overlap 2736472 ATGCTGTGGGAAAAA AGACGCGGCGTG GCG CGCGCCGCGTCC TGATTTCGCGGGCGA TERM 2839 2736500 - 2736476 - g 100 -17.1 -5.00616 | opp_overlap 2736475 2736472 TGCTGTGGGAAAAAA GACGCGGCGTG GCG CGCGCCGCGTC CTGATTTCGCGGGCG Bphy_2433 2735347 - 2736504 + | major facilitator transporter Bphy_2434 2737828 - 2736518 - | fumarylacetoacetase Bphy_2435 2739147 - 2737825 - | homogentisate 1,2-dioxygenase Bphy_2436 2739336 - 2740208 + | putative diguanylate phosphodiesterase Bphy_2437 2741039 - 2740215 - | IclR family transcriptional regulator Bphy_2438 2741157 - 2742347 + | acyl-CoA dehydrogenase domain-containing protein TERM 2840 2742378 - 2742412 + T 100 -17.3 -4.68593 | opp_overlap 2742383, overlap 2742383 CAAACGGCGCCTATT TAAAAGCCCGCGTTC TCAAC GAACGCGGGCTTTTC TTTTTGCCTCGTCAG TERM 2841 2742383 - 2742407 + T 100 -17.2 -5.2853 | opp_overlap 2742383, overlap 2742378 GGCGCCTATTTAAAA GCCCGCGTTC TCAAC GAACGCGGGC TTTTCTTTTTGCCTC TERM 2842 2742407 - 2742383 - T 100 -17.2 -4.18018 | opp_overlap 2742383 2742378 GGCGCCTATTTAAAA GCCCGCGTTC TCAAC GAACGCGGGC TTTTCTTTTTGCCTC Bphy_2439 2743076 - 2742438 - | peroxidase TERM 2843 2743388 - 2743412 + H 100 -13.6 -4.56702 | gap 1 CGTAACCCATGCGCA CGGTCCGCTGG CTCG CCAGCGG-CCG TTTCTTTGGTTACGA Bphy_2440 2743460 - 2743762 + | protein of unknown function DUF883 ElaB TERM 2844 2743774 - 2743801 + F 76 -14 -2.75064 | opp_overlap 2743763, overlap 2743770 GTAATGCGCGCGAAG CCCCGGCCGCGC ATTC GGGCGGCCGGCG TACTTCGCTGACAGG Bphy_2441 2743882 - 2744265 + | putative transmembrane protein Bphy_2442 2744308 - 2744793 + | hypothetical protein TERM 2845 2744801 - 2744815 + T 74 -7.8 -4.2349 | opp_overlap 2744784 CGCCCTGACATGGCG CGCGTC GTC GATGCG TTTTCCATCTAGCGC TERM 2846 2744846 - 2744872 + T 71 -7.3 -4.20768 | gap 1 GCACTCCAGCAATCG TCGGGGT-TGGC GCCC GCTGCACCCCGA TTGTTTCTTAGCCCT Bphy_2443 2745243 - 2744824 - | hypothetical protein TERM 2847 2745186 - 2745170 - G 77 -12.3 -3.57462 | GACGGTATTGCGAAA GCAGCGA GCG TCGCTGC GATCGCCAGTGCGAC Bphy_2444 2745791 - 2745267 - | hypothetical protein Bphy_2445 2746630 - 2745788 - | hypothetical protein Bphy_2446 2747061 - 2746627 - | hypothetical protein Bphy_2447 2747618 - 2747058 - | hypothetical protein TERM 2848 2747434 - 2747376 - G 76 -13.7 -3.12895 | gap 1, overlap 2747344 2747374 2747372 CGCCGTAGCAAGACA GTGACGCGCCGCGTCGACGCGGCACACG GTCA CGCGTGC-GCCCCGGCGCAACGCCTCGC CGCGCGCGTAGCTGA Bphy_2448 2748285 - 2747791 - | ATP-cone domain-containing protein TERM 2849 2748203 - 2748223 + g 81 -15.4 -3.01712 | GCCGGGCAACGCCGG CGGCGCCG GATCG CGGCGCCG TCTTCGGACACCCGC Bphy_2449 2749539 - 2748292 - | glycine hydroxymethyltransferase TERM 2850 2748373 - 2748411 + g 84 -14.6 -3.39895 | opp_overlap 2748393 CGTGTCTTCGGGGTT GTCCAGCACGTCGGCAAT CAG GTTGCCGACCTGCTCGGC TTCCTTCGTACCGAA TERM 2851 2748463 - 2748481 + g 79 -10.2 -4.12902 | opp_overlap 2748456, overlap 2748475 CGAACCGAGACGGAT GCCGCTCG TCA CGAACGGC TTTTCCGGGTCATTC TERM 2852 2749239 - 2749222 - G 70 -2.6 -4.60487 | CAGCATCGCGAAAAA CACGCC CTGGTT GGCCTG CGAGCCCGAGTTCGG TERM 2853 2750149 - 2750107 - g 90 -15.5 -3.53012 | gap 1, overlap 2750145 CGGGCTTTCGTCAAA GGCGGCCATCGCGTCGTCGC AACC GCG-CGCCGCAAGGACCGCC TTCAGGCGCTCGCTG TERM 2854 2750656 - 2750629 - g 75 -3.4 -4.77036 | gap 1, overlap 2750649 GGCGACGAGGAAAAA GCTGCGACCGTCT ACC AGAACGTC-CAGC CGCTCACGGCGGAAG Bphy_2450 2750041 - 2750787 + | short-chain dehydrogenase/reductase SDR Bphy_2451 2750912 - 2751391 + | tol-pal system-associated acyl-CoA thioesterase TERM 2855 2751618 - 2751633 + G 75 -6.8 -4.33274 | overlap 2751612 AGCCTGCTGGCGCAG GCAGTG ATGG CGCTGC TTTTGCTGCTGTCGC TERM 2856 2751867 - 2751851 - g 79 -6.5 -4.47271 | overlap 2751852 GAAAGGCAAGGAAAA GCGGATC AAC GATCCGG GCGCGATTCTCGATG Bphy_2452 2751555 - 2752232 + | protein TolQ Bphy_2453 2752244 - 2752690 + | protein TolR Bphy_2454 2752687 - 2753742 + | protein TolA TERM 2857 2754540 - 2754515 - g 93 -4.7 -5.45802 | GTTCGAAAAGAAAAA GCCGATCGT CTATATCC ACGATCTGC CGACGGGCCGCCGCG TERM 2858 2754817 - 2754794 - g 77 -13.2 -3.39327 | gap 1 GCCGCAGATCTACAA GATGCC-CGCC AGC GGCGAGGCATC GGGCGGCGCACAGCG Bphy_2455 2753859 - 2755151 + | beta-propeller repeat-containing to-pal system protein TolB TERM 2859 2755619 - 2755608 - g 78 -3.6 -4.86731 | overlap 2755609 CCTGGGCAAAGAAAA GCCG CAGG CGAC GGGTCATGACGAAGC TERM 2860 2755660 - 2755650 - g 72 -8.2 -4.07568 | opp_overlap 2755656 GTCGTGGGCGCAAAA CCGC CGC GCGG ACCTCGTCTATCAAC Bphy_2456 2755171 - 2755680 + | peptidoglycan-associated lipoprotein TERM 2861 2755927 - 2755893 - g 81 -14.2 -3.44051 | overlap 2755894 2755914 CCTCGACCAGCAGAA CCGTCTCGACCAGCTG AAC CAGCAGGTCGCGACGC TGCGCGGGCAGAACG TERM 2862 2755926 - 2755894 - g 84 -17.7 -2.66216 | overlap 2755893 2755914 CTCGACCAGCAGAAC CGTCTCGACCAGCTG AAC CAGCAGGTCGCGACG CTGCGCGGGCAGAAC TERM 2863 2756382 - 2756364 - g 71 -4.5 -4.56597 | GGCTGCCGCCAAAAA GACGCTC GAACA GATCGTC GCGCAGTACGGCGGA Bphy_2457 2755696 - 2756445 + | tol-pal system protein YbgF TERM 2864 2756448 - 2756476 + T 85 -10.2 -4.35483 | gap 1, opp_overlap 2756446, overlap 2756451 2756453 GCAGATCAAATGATT CGTGGCGCCCGGC TCGC GCCGGACGTC-CG TTTGTTGTGATGCAG TERM 2865 2756541 - 2756573 + T 100 -15 -4.09685 | opp_overlap 2756546, overlap 2756546 CGCGTGCCTCTCGCC GAAAAGCCCGAAAC TTCCC GTTCCGGGCTTTTC TTTTGAAGCATGCGC TERM 2866 2756568 - 2756546 - T 85 -11.3 -4.07568 | opp_overlap 2756546 2756541 GCCTCTCGCCGAAAA GCCCGAAAC TTCCC GTTCCGGGC TTTTCTTTTGAAGCA TERM 2867 2756546 - 2756568 + T 100 -9.1 -5.07652 | opp_overlap 2756546, overlap 2756541 GCCTCTCGCCGAAAA GCCCGAAAC TTCCC GTTCCGGGC TTTTCTTTTGAAGCA TERM 2868 2756743 - 2756764 + T 100 -15.1 -4.68645 | opp_overlap 2756737 2756735 ACCAAAAGATTCGAA GGGCCTGGC GCAA GCCGGGCCC TTTTCATTTTGCGTC TERM 2869 2757002 - 2756972 - T 81 -11.8 -3.78953 | opp_overlap 2756974, overlap 2756921 ACGTGCACGACGAAA TAGCACGGCACCTG GGA CAGGAGCGGCGCTA TGTCGAGGACGGCAG Bphy_2458 2758330 - 2757263 - | glycosyl transferase group 1 Bphy_2459 2759577 - 2758330 - | polysaccharide biosynthesis protein TERM 2870 2759887 - 2759901 + G 71 -12.8 -2.96692 | GCCCCCATCGCCGAT GCCGCG AGC CGCGGC TATGTCGTCATCATC TERM 2871 2760873 - 2760855 - g 71 -12.4 -3.29144 | opp_overlap 2760847 GTACCGCTTCGACAA GCCCGTGG TCG CCACGAGC GACGGGCTGATCGGC Bphy_2460 2759839 - 2761098 + | glycosyl transferase group 1 Bphy_2461 2762471 - 2761158 - | acyltransferase 3 Bphy_2462 2763741 - 2762596 - | acyltransferase 3 TERM 2872 2763938 - 2763989 + H 71 -10.8 -3.54741 | gap 1, opp_overlap 2763973 CGTGCGCCAAGTTGC TGTCCTT-GTCGGACAGCCTGGCGG ACC CCGCCAAACCGTCTGACTACGGGCA TTTGCCCGCATCGTG Bphy_2463 2764138 - 2765640 + | hypothetical protein Bphy_2464 2765816 - 2767000 + | glycosyl transferase group 1 TERM 2873 2767077 - 2767056 - T 100 -10.1 -5.27335 | opp_overlap 2767057, overlap 2767057 CGCGCCAAAGAAAAA TCCCGCGAT CTGC ATCGCGGGT TTTTTTATGGCGCTA TERM 2874 2767076 - 2767057 - T 88 -13.6 -3.75678 | opp_overlap 2767057, overlap 2767056 GCGCCAAAGAAAAAT CCCGCGAT CTGC ATCGCGGG TTTTTTTATGGCGCT TERM 2875 2767057 - 2767076 + T 100 -13.6 -5.61596 | opp_overlap 2767057 2767056 GCGCCAAAGAAAAAT CCCGCGAT CTGC ATCGCGGG TTTTTTTATGGCGCT Bphy_2465 2768886 - 2767141 - | FAD dependent oxidoreductase Bphy_2466 2769857 - 2769144 - | acetyltransferase TERM 2876 2769205 - 2769189 - G 73 -9.4 -3.85817 | overlap 2769175 ACGCTTGCGGATAAA GCGGCA CGGAT TGCCGC CATACACACCTTCCG TERM 2877 2769668 - 2769654 - G 86 -9.2 -4.57073 | opp_overlap 2769656 CAGCTCGGTGAAAAA GCCGCG CGA CGCGAC GTAATTGCCCTTGCC Bphy_2467 2770070 - 2770675 + | hypothetical protein TERM 2878 2770748 - 2770699 - T 100 -22.4 -4.19817 | opp_overlap 2770702 2770705, overlap 2770700 CTGAGCCATGCAAAA GCCGAAGGCCGCATGCGA-CCGTC CCGT GACGGTTCGCATGCGGCCTTCT-C TCTTTCCGGTGTCAG TERM 2879 2770748 - 2770700 - T 100 -22.6 -3.11569 | gap 1, opp_overlap 2770702 2770705, overlap 2770699 TGAGCCATGCAAAAG CCGAAGGCCGCATGCGA-CCGTC CCGT GACGGTTCGCATGCGGCCTTCTC TCTTTCCGGTGTCAG TERM 2880 2770702 - 2770746 + T 100 -29.6 -3.26745 | gap 1, opp_overlap 2770699 2770700, overlap 2770705 AGCCATGCAAAAGCC GAAGGCCGCATGCGA-CCGTC CCGT GACGGTTCGCATGCGGCCTTC TCTCTTTCCGGTGTC TERM 2881 2770705 - 2770743 + T 100 -25.5 -3.76634 | gap 1, opp_overlap 2770699 2770700, overlap 2770702 CATGCAAAAGCCGAA GGCCGCATGCGA-CCGTC CCGT GACGGTTCGCATGCGGCC TTCTCTCTTTCCGGT Bphy_2468 2772086 - 2770779 - | glycosyl transferase group 1 TERM 2882 2771610 - 2771626 + g 79 -15.1 -3.01712 | GATCCAGTATGCGAT GCGCGCG GCG CGCGCGC TCTTCAACAGGCCGA Bphy_2469 2773341 - 2772199 - | glycosyl transferase group 1 TERM 2883 2772824 - 2772796 - G 85 -12.3 -4.07568 | GCGCTCCGGCGAAAA CGTGACGGGCAGC GCG GCCGCCTGGCACG GAATGAAAATCTTCT TERM 2884 2772940 - 2772919 - G 100 -3.7 -5.50499 | gap 1 GCACAGCGAAAAAAA CACG-CGCTT CGG AATCGACGTG ATGAGCCGCTTTGGA TERM 2885 2773432 - 2773391 - R 78 -6.5 -4.56597 | gap 1, overlap 2773394 TTGCCCTTGCAAAAA GAACGGACGTCGCCCTAATC CCG GTCCCAGGCAACGTCCG-TC ACCAGGAACGGCGCA TERM 2886 2773430 - 2773394 - R 83 -9.3 -4.40561 | overlap 2773391 CCCTTGCAAAAAGAA CGGACGTCGCCCTAATC CCG GTCCCAGGCAACGTCCG TCACCAGGAACGGCG Bphy_2470 2774443 - 2773448 - | NAD-dependent epimerase/dehydratase TERM 2887 2774260 - 2774207 - G 93 -13.9 -4.12532 | gap 3, opp_overlap 2774241, overlap 2774236 2774238 GTTCTCATAGAGAAA CTCGCCGGGCTGCGTCGCGTTGGCGA GAATA CCGCCGACGCG-CGCCGCC-G-CGAG CAGCACGACGTCGAT Bphy_2471 2775576 - 2774449 - | GDP-mannose 4,6-dehydratase TERM 2888 2774555 - 2774579 + g 71 -9.1 -3.74747 | ACGAGCGCCTCGAAC GGCGTGGCGGG TGT CCAGCCGAGCC TTTGCTGCGCCTTCG Bphy_2472 2777916 - 2775691 - | exopolysaccharide transport protein family Bphy_2473 2779148 - 2778009 - | polysaccharide export protein Bphy_2474 2780589 - 2779204 - | undecaprenyl-phosphate glucose phosphotransferase TERM 2889 2779768 - 2779716 - G 71 -9.8 -3.76125 | gap 2, overlap 2779717 TCACCGCAATCGAAA TCGCG-ATCAGCAGCGGC-GCAAGCC CGA GGATCGCAGCCGCGGCGAACACGCGA TCGAACAGGTCCTTC Bphy_2475 2782176 - 2780659 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2890 2780881 - 2780833 - G 70 -7.4 -3.96148 | TTCGCTCAGCAGAAA CT-GCTCGTCGCCGCGCGTGACGA GGG CCGTGCCGCGC-ACGACGATCCAG TGCTCCGCGCGATGG TERM 2891 2781203 - 2781223 + g 76 -6 -4.49756 | opp_overlap 2781198, overlap 2781193 CCTTCGAACATCACG CGGCCGCG CGCGA CGTTGCCG TTTTCGTCTTTCGGC TERM 2892 2781740 - 2781692 - G 88 -17.4 -3.05463 | gap 2 AGCGTGGCGATCGAA CCGCGTTGC-GCGTG-GCGCGCGG CGA CCTCGAGCGCGCGCTGCAACGCGG GCACATCGGCGATTG Bphy_2476 2783254 - 2782253 - | AraC family transcriptional regulator TERM 2893 2784135 - 2784121 - g 93 -4.2 -5.24129 | CGCGGGGAGAAAAAA TGACTG ATG CAGACA AGGGTCTCGGTAGAA TERM 2894 2785329 - 2785297 - g 75 -12 -3.51411 | gap 1, overlap 2785293 2785316 2785318 ATCTGCCGAAATCAA CGAGCGCGCTGCGCG AATA CATGCAGCGCG-TCG GCACGGAATCGAGCC Bphy_2477 2784120 - 2786411 + | hypothetical protein Bphy_2478 2786938 - 2787354 + | NUDIX hydrolase TERM 2895 2787413 - 2787390 - T 84 -13.1 -3.75153 | CTTGGGCAACGGAAA GCGCGGCAG ACTCTG CCGCCGCGC CCTCTCGAACACGAC Bphy_2479 2788363 - 2787431 - | UTP-glucose-1-phosphate uridylyltransferase TERM 2896 2787989 - 2788003 + g 71 -4.2 -4.56597 | opp_overlap 2787979, overlap 2787946 2787945 AATCACGGCGAACGG CTCGTC GCC GACCAG TTTTTCCGCGCAGAG Bphy_2480 2788554 - 2789618 + | AraC family transcriptional regulator TERM 2897 2789666 - 2789642 - f 70 -12.1 -2.70932 | GCCTGTCTCTAACGA GCCGTCGTGCA GCC CGCATGACGGC GAGCATGAGCTAATA TERM 2898 2789725 - 2789738 + F 70 -3.7 -4.56597 | overlap 2789709 GGCGCCAGTACGATC CGCCC TTTT GCGCG TTTTTGCGCGCACAC TERM 2899 2790143 - 2790181 + G 74 -13.1 -3.21416 | gap 1, overlap 2790179 GCCGCGCTCGCCTGC GCGTTCGC-GCCGAACGC CTGG GTGCTCGGCGGCGCACGC TTCGTGATGGGACTG Bphy_2481 2789759 - 2791249 + | major facilitator transporter TERM 2900 2791294 - 2791321 + F 100 -13.4 -4.4267 | CGTCGTTGTGACATC GGGGGTCTCCGG GCAA CGGGAGACCCTC TTTTGCATTTTGGCG Bphy_2482 2791430 - 2791873 + | hypothetical protein TERM 2901 2791975 - 2791994 + F 100 -15 -3.91144 | ATCGATGATTGCAGG CGGCGGCA ACTG TGCCGCCG TTTCTCGCATCTCGG Bphy_2483 2792166 - 2792978 + | MscS mechanosensitive ion channel TERM 2902 2793004 - 2793037 + T 71 -12.5 -2.55213 | gap 1, overlap 2793001 TCTCGATTCGTTGCG CGGGCATCCGT-CGAT TGC GTCGAACGAATGCCCG TGACTTGCGTGGGTC Bphy_2484 2793740 - 2793051 - | SNARE associated Golgi protein TERM 2903 2794168 - 2794150 - g 70 -11.6 -3.30159 | GGAACTGCTGGAGAA CGCGCTCG ACG CGGGCGCG ACGGCGCTGCGCATC TERM 2904 2794455 - 2794487 + G 74 -5.3 -4.46112 | opp_overlap 2794478 TCTCGCCGGCAGCGG GCACGCGCGGCACGA CGA TCGAAGTGCGCGAGC TTTATTTCAATACGC TERM 2905 2794742 - 2794788 + G 70 -5.7 -4.24342 | gap 2, opp_overlap 2794715, overlap 2794751 CTCGCCGTGTACGGC TGC-GCCGGCCTGC-CGACCGCG AGC CGCGGACGCGCGGATCAGCAGTA TTTCTTCGTCAACGG TERM 2906 2794751 - 2794786 + G 71 -9.6 -3.72374 | gap 1, opp_overlap 2794715, overlap 2794742 TACGGCTGCGCCGGC CTGCCGA-CCGCGAGCC GCG GACGCGCGGATCAGCAG TATTTCTTCGTCAAC TERM 2907 2795089 - 2795103 + G 76 -5.6 -4.56597 | opp_overlap 2795043 ACCGATGCCATCCGC GTCGCC CGT GTCGAC TTTTTCGACCGGCAC TERM 2908 2795665 - 2795651 - g 71 -10 -3.61398 | opp_overlap 2795635 GGCGTGGTCGAAGAA GAGCGT GAG ACGCTC GATGCGCTCGGCTTC Bphy_2485 2793941 - 2796016 + | DNA mismatch repair protein MutL Bphy_2486 2796051 - 2797004 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 2909 2797419 - 2797385 - T 89 -15.9 -3.33261 | gap 2 CCGCAAGCTTTAGAA CGCTGGCAACGAGCATG GAT CA-GCTCGTTGCC-GCG TGGAGGACGGGGACG Bphy_2487 2798718 - 2797651 - | phosphoribosylformylglycinamidine cyclo-ligase Bphy_2488 2798816 - 2799892 + | hypothetical protein Bphy_2489 2799947 - 2800720 + | DnaA regulatory inactivator Hda Bphy_2490 2800713 - 2801399 + | HAD family hydrolase TERM 2910 2802482 - 2802457 - g 77 -12.5 -3.67597 | opp_overlap 2802468, overlap 2802459 GCTCGCATTGAACAA CACCGACGCGC GCGT GCGCGCCGGCA AGCCGGTATCGCCCG TERM 2911 2802480 - 2802459 - g 84 -15.1 -3.41988 | opp_overlap 2802468, overlap 2802457 TCGCATTGAACAACA CCGACGCGC GCGT GCGCGCCGG CAAGCCGGTATCGCC Bphy_2491 2801396 - 2803012 + | poly(A) polymerase Bphy_2492 2803061 - 2803651 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 2912 2804167 - 2804189 + G 80 -8.4 -4.39998 | GATGCGTACCTGCGT TCGCTGTGCG ACG CGTACAACGA TTTCTTCTATCACTA Bphy_2493 2803648 - 2804343 + | deoxynucleoside kinase TERM 2913 2804365 - 2804329 - f 88 -14.4 -3.53761 | opp_overlap 2804348 GAATTCTTTGTCAAA GGCGGCACGCTATAGC GTCCG GCTGCAGCGTGCGGCC GTATTACCAACGGAC TERM 2914 2804348 - 2804366 + F 71 -12.4 -3.01791 | opp_overlap 2804329 GCACGCTATAGCGTC CGGCTGCA GCG TGCGGCCG TATTACCAACGGACT Bphy_2494 2804386 - 2805201 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 2915 2805212 - 2805231 + T 100 -15 -4.07568 | opp_overlap 2805207 TCTGATTCAAGCCGG GCGGCGCT TTCG AGCGCCGC TTTTCAGGACCGGGC Bphy_2495 2807170 - 2805305 - | para-aminobenzoate synthase, subunit I TERM 2916 2806316 - 2806276 - G 72 -8.3 -4.13945 | gap 2, overlap 2806277 AGCCGCAGGGGAAAA GC-GCGCGCA-GAACGTCG GCGAA CGACGTGCGTGGGCGCAGC ATCGCCGTCACTGTC TERM 2917 2806944 - 2806920 - G 100 -17.1 -5.64873 | opp_overlap 2806920 TCGAACAATAAAAAA CGCAGCGAGCC ACT GGCACGCTGCG TTTCCTGTTGCAAAG TERM 2918 2806920 - 2806944 + g 93 -17.1 -3.92324 | opp_overlap 2806920 TCGAACAATAAAAAA CGCAGCGAGCC ACT GGCACGCTGCG TTTCCTGTTGCAAAG TERM 2919 2807018 - 2806999 - G 70 -5.6 -4.24948 | overlap 2806970 2807002 GCACGACAGCGAAAA GACCGCTG TCGA CATCGGCC GACGCCGCGTCGCAC TERM 2920 2807123 - 2807094 - G 70 -14.3 -2.57463 | gap 1, overlap 2807093 AAGCCCGTGTATAAC CGGCTCGACCGGCG ACT CGC-GGTCGAGTCG CAGTCGTCCAGCAAC Bphy_2496 2808328 - 2807195 - | chaperone protein DnaJ TERM 2921 2808488 - 2808454 - R 93 -9.1 -4.77173 | opp_overlap 2808451, overlap 2808455 CCTCCATAAAACAAA TGTGCCCGGAGAGCC GGAAA GGCTCGCCAGGCGCG TGATCGGTTCAATCG TERM 2922 2808487 - 2808455 - R 79 -12.6 -3.45581 | opp_overlap 2808451, overlap 2808454 CTCCATAAAACAAAT GTGCCCGGAGAGCC GGAAA GGCTCGCCAGGCGC GTGATCGGTTCAATC Bphy_2497 2810545 - 2808584 - | chaperone protein DnaK Bphy_2498 2811131 - 2810700 - | putative thioredoxin protein TERM 2923 2810895 - 2810856 - G 78 -3.4 -4.96848 | gap 1, overlap 2810857 2810859 GTGGTGATAGAAAAA CCACGTC-GGCACGCCATG CAG CATGAAGCGCCTGCCGAGA TCGCGATGTTCATAG TERM 2924 2810966 - 2810925 - G 74 -10.8 -3.74251 | gap 1, opp_overlap 2810961 2810962, overlap 2810928 GACATTGCTATGAAA CCAGCGCAGGCGGAGCGCA CGGAT CGC-CTCCGGCTGCGCGAG CATCGCCTTCTTCGC TERM 2925 2810963 - 2810928 - G 71 -13.3 -2.96873 | gap 1, opp_overlap 2810961 2810962, overlap 2810925 ATTGCTATGAAACCA GCGCAGGCGGAGCGCA CGGAT CGC-CTCCGGCTGCGC GAGCATCGCCTTCTT Bphy_2499 2811756 - 2811148 - | GrpE protein TERM 2926 2811497 - 2811514 + g 80 -4.7 -4.78848 | overlap 2811498 TTCGCCACGTCTTCC TGACCGC GGCG GCGGACG TTTTCTGTTTCCGCC Bphy_2500 2812104 - 2812265 + | hypothetical protein Bphy_2501 2812686 - 2812237 - | RNA-binding S4 domain-containing protein Bphy_2502 2813799 - 2812729 - | ferrochelatase TERM 2927 2813833 - 2813812 - R 75 -9.3 -3.85256 | overlap 2813814 CATAGGCAAAGACAA GAGCCGCGC ACAG GCGCGACAC GTAATGGACGGGAAG TERM 2928 2813831 - 2813814 - R 71 -10.5 -3.50303 | overlap 2813812 TAGGCAAAGACAAGA GCCGCGC ACAG GCGCGAC ACGTAATGGACGGGA TERM 2929 2813940 - 2813913 - R 83 -7.7 -4.59773 | gap 1, opp_overlap 2813907 TGGCACGGCGAAAAA CGCCGCGCATGA TGAAC TCGT-CGCGGCG TTGCGCTGCTTCCGG Bphy_2503 2814976 - 2813957 - | heat-inducible transcription repressor HrcA Bphy_2504 2815259 - 2816161 + | ATP-NAD/AcoX kinase Bphy_2505 2816260 - 2817927 + | DNA repair protein RecN Bphy_2506 2820777 - 2817985 - | (glutamate--ammonia-ligase) adenylyltransferase TERM 2930 2820255 - 2820281 + g 71 -10 -3.58522 | opp_overlap 2820245 2820246 AGAAATCCTGCGTCG CGATGGACGACC GCT GGCCGCCCGTCG TTTCGCCATCGTCCT TERM 2931 2820564 - 2820574 + g 84 -8.2 -4.57837 | overlap 2820525 2820556 2820553 CTTCCGCGCGAAGCT GGCG CAG CGCC TTTTTCAGCGCGTCT TERM 2932 2822978 - 2822960 - g 78 -4.4 -4.77036 | overlap 2822962 TCGCACGATGAAAAA CGGCACGC CGA GCGTGTGG CCTGCGCTTGACGGC TERM 2933 2823197 - 2823179 - g 71 -10.2 -3.66018 | CGACTACGTGAACAA CAGCGCGC TCG GCGGGCTG GCCAAGCATCAGACG Bphy_2507 2820963 - 2825222 + | hypothetical protein TERM 2934 2825260 - 2825279 + F 71 -10.7 -3.53012 | overlap 2825259 CGCCGGCGCTACATG CAGCGCG GCATCG CGCGCTG TTTGCGAGCGCCCGA TERM 2935 2825735 - 2825697 - g 82 -16 -3.05463 | AGGCGCCCGAGGCAA CCCGCGTGCTGAACACGA CGC TCGTGTTCGACCCGCAGG GCAACGAGGCCGCGC TERM 2936 2826005 - 2825964 - g 70 -13.6 -2.64933 | overlap 2825985 CATTCACGTACACGA CGGGCCGCGCGCACTG GGAAACGCTG CTGCGCGCGCGGGCCG TCGAGAATCAGTGCT Bphy_2508 2825372 - 2826220 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 2937 2826542 - 2826578 + G 75 -14.4 -3.01924 | gap 1 CGACCAGGGCGTCGG CGTGCGCGCCGTGTCGG GCGA CCG-CACGGCGTTCGCG TATTCGGACGACCTG Bphy_2509 2826318 - 2827784 + | peptidase U62 modulator of DNA gyrase TERM 2938 2827827 - 2827841 + F 93 -11.4 -4.58395 | overlap 2827794 CGCGAGCGCCACTTG TGCGGG TTT CCCGCA TTTTTGCAGCCTGCA TERM 2939 2828045 - 2828027 - f 100 -11.7 -5.03747 | opp_overlap 2828027 AAATTCCCGAAAAAA CCGCCAG CGAGT CTGGCGG TTTTTTTTCGCCCTA TERM 2940 2828027 - 2828045 + F 100 -11.7 -5.76949 | opp_overlap 2828027 AAATTCCCGAAAAAA CCGCCAG CGAGT CTGGCGG TTTTTTTTCGCCCTA TERM 2941 2828479 - 2828460 - g 72 -3.4 -4.59773 | overlap 2828435 2828462 GTGTACTTCGAAAAA CCGCGCAC GACG GTGGGCTG GAAAGGCCTCATCAA Bphy_2510 2828166 - 2829239 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2942 2829271 - 2829291 + T 100 -14 -5.42259 | TTCTACGCAGACTTC GCCCGGCT CACGC AGCCGGGC TTTTTTTGGCCATCC Bphy_2512 2830073 - 2829495 - | ATP--cobalamin adenosyltransferase Bphy_2513 2830227 - 2831684 + | FAD linked oxidase domain-containing protein Bphy_2514 2831749 - 2833254 + | D-lactate dehydrogenase (cytochrome) TERM 2943 2833265 - 2833293 + F 89 -16.7 -3.13432 | TCTGAGCACCGCACC GCGCCATGCCGCT GTT GGCTGCATGGCGC TTGCGTCGTCTTGCG Bphy_2515 2833415 - 2834503 + | FAD linked oxidase domain-containing protein TERM 2944 2835409 - 2835381 - g 71 -10.2 -3.63515 | gap 1, opp_overlap 2835381 2835382, overlap 2835382 CCGGACTTCGAAGAA GCGCTGACGCCGC TCAC GCGGCGCCGG-GC GATTCATACGGTTGC Bphy_2516 2834511 - 2835737 + | hypothetical protein TERM 2945 2835789 - 2835772 - f 79 -12.7 -3.28924 | CACGTTCGTGCACAA CCTGGCC GATC GGCCAGG TCGTGGCGCGCGGGC Bphy_2517 2835852 - 2836550 + | alanine racemase domain-containing protein Bphy_2518 2836565 - 2837380 + | pyrroline-5-carboxylate reductase Bphy_2519 2838340 - 2837477 - | 4-hydroxybenzoate polyprenyl transferase TERM 2946 2838449 - 2838424 - R 100 -12.5 -5.75538 | opp_overlap 2838424 GGCAAAAAACAAAAA GCCCGACGGGC CTTC ACCTGTCGGGC TTGTTCATCGGCGAC TERM 2947 2838424 - 2838449 + r 88 -14 -3.71848 | opp_overlap 2838424 GGCAAAAAACAAAAA GCCCGACGGG CCTTCA CCTGTCGGGC TTGTTCATCGGCGAC Bphy_2520 2838988 - 2838500 - | Ferritin Dps family protein TERM 2948 2839284 - 2839248 - R 71 -8 -4.08216 | opp_overlap 2839280 CGAGCTTCTGCAAAA GCATGGGAGT-CCGCACG TGT CGGGCGACACTCCC-CGC GTTGCCAGCTGCATT Bphy_2521 2840891 - 2839437 - | catalase TERM 2949 2839527 - 2839570 + g 75 -13.9 -3.01712 | gap 1, opp_overlap 2839540 GAAGTGCTCGATCTG TCGCGCGACGATATCGGCGG GCACG CCGTCGATCGC-TCGCGCGA TGTTGCCGAACAGAC TERM 2950 2841231 - 2841252 + r 80 -14.5 -2.78384 | CCGGTGGACGATGCA TCGACAGCC GCAC GGCTGTCGA TATCCTGCGGCAACA Bphy_2522 2842231 - 2841272 - | LysR family transcriptional regulator Bphy_2523 2844577 - 2842355 - | ATP-dependent DNA helicase RecG TERM 2951 2843333 - 2843368 + g 73 -6 -4.39414 | gap 1, overlap 2843332 GCCGATCACCAGTTG CGCAGTGCCGAGCGCCG CCG CTTCGATC-GCGCTGCG TTTCTCTTTCGTCTT TERM 2952 2843409 - 2843466 + g 71 -10.5 -3.64703 | gap 2, opp_overlap 2843388 2843402, overlap 2843410 GCAAGCCACGCGACC GTCACGCCGAGCGGCTCGAGC-C-AGC CGCGCA GCTTGCGCGCGTGCTGCTCGGCGAGAA TTTCGGTCGGCGCCA TERM 2953 2843410 - 2843465 + g 73 -14 -2.78679 | gap 2, opp_overlap 2843388 2843402, overlap 2843409 CAAGCCACGCGACCG TCACGCCGAGCGGCTCGAGC-C-AGC CGCGCA GCTTGCGCGCGTGCTGCTCGGCGAGA ATTTCGGTCGGCGCC TERM 2954 2844131 - 2844101 - G 74 -11.1 -3.63515 | gap 1 CTCCATGCCGAAGAA GCCGC-CGCGCACG TCGC CGCGCACGCGCAGC CGCACACCAACCGAC TERM 2955 2845781 - 2845752 - g 78 -10.7 -4.03234 | gap 1 TCGCGGGCATAGAAA CGATCCGCGCGGCG TAT CGTCACGCG-ATCG ACGGGCGTTACCGCT Bphy_2524 2844794 - 2845855 + | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase TERM 2956 2846386 - 2846362 - g 80 -13.6 -3.33696 | opp_overlap 2846362 CGCGTCCCCAATCAA CGGCGACAAG CTGTT CCTGTCGCCG GAAGTGTCCATGCAG TERM 2957 2847084 - 2847063 - g 77 -11.5 -3.76968 | AACTGATGCAGGAAA TGCGCGACG CCAT CGACGCGCA GACCTTCGACGTATT Bphy_2525 2845940 - 2847142 + | queuine tRNA-ribosyltransferase TERM 2958 2847267 - 2847257 - f 74 -8.2 -4.25104 | GGCCCGTCAGGAAAA CCCG CTG CGGG TGCCGTCCCGTAAAT Bphy_2526 2847340 - 2847669 + | preprotein translocase, YajC subunit TERM 2959 2847681 - 2847712 + F 71 -12.2 -2.99319 | GTAAGGCCTGCTCTC TTGCGTCCGGCGCG GCCT CGCGCCGAGCGGAA TCTCTATCCGCGCTT Bphy_2527 2847790 - 2849835 + | protein-export membrane protein SecD TERM 2960 2850772 - 2850758 - g 70 -5.6 -4.32402 | GCTGAAGGAAAAGAA GGAACG CCA CGATCC GAACGATCCCAACGC Bphy_2528 2849853 - 2850803 + | protein-export membrane protein SecF TERM 2961 2850838 - 2850871 + T 100 -18.3 -2.80796 | opp_overlap 2850844, overlap 2850844 ACGTTGTTAGCACCA GAAAAAGGCCGGTTC AATC GAACCGGCCTTTGTC GTTTACATCATCGGC TERM 2962 2850865 - 2850844 - T 100 -15.9 -4.93296 | opp_overlap 2850838 2850844 TTAGCACCAGAAAAA GGCCGGTTC AATC GAACCGGCC TTTGTCGTTTACATC TERM 2963 2850844 - 2850865 + T 100 -15.9 -4.14725 | opp_overlap 2850844, overlap 2850838 TTAGCACCAGAAAAA GGCCGGTTC AATC GAACCGGCC TTTGTCGTTTACATC Bphy_2529 2852179 - 2850902 - | major facilitator transporter TERM 2964 2851606 - 2851595 - G 81 -3.6 -5.07486 | overlap 2851597 CAGGCCGAAGAAAAA CGGC ACGC GCCA GCCCCACGCGTTCAG TERM 2965 2852386 - 2852359 - R 100 -17.8 -5.80364 | gap 1, opp_overlap 2852359 ACGCCAATAAAAAAA CCGCTCCG-TCGC AAG GCGAACGGAGCGG TTTGTGCGGACCGGC TERM 2966 2852359 - 2852386 + r 100 -17.8 -3.85698 | gap 1, opp_overlap 2852359 ACGCCAATAAAAAAA CCGCTCCG-TCGC AAG GCGAACGGAGCGG TTTGTGCGGACCGGC Bphy_2530 2852994 - 2852425 - | YceI family protein Bphy_2531 2853610 - 2853047 - | YceI family protein TERM 2967 2853564 - 2853539 - G 72 -11.1 -3.54424 | gap 1 GTCGACTTGCGCAAA CG-CGCTGCCCG ACG CGGCCAGCGACG CCGCCGCGAACGCAG Bphy_2532 2854239 - 2853619 - | cytochrome B561 TERM 2968 2855297 - 2855273 - g 77 -12.7 -3.40299 | overlap 2855274 GCACGACAGCGATAA CGGCGAGCCCG GCA CGGGCGCGCCT GGCGTCGATGGTCCC TERM 2969 2855296 - 2855274 - g 77 -16.2 -2.63858 | overlap 2855273 CACGACAGCGATAAC GGCGAGCCCG GCA CGGGCGCGCC TGGCGTCGATGGTCC Bphy_2533 2854596 - 2855333 + | paraquat-inducible protein A TERM 2970 2855448 - 2855424 - g 75 -15 -2.70932 | CGTGCGCTCGAAGGA GCCGCAACGC TGCTC GCGCTGCGGC GCGGTCATGCACCGG Bphy_2534 2855341 - 2856015 + | paraquat-inducible protein A TERM 2971 2856394 - 2856418 + G 71 -12.1 -3.29144 | GCGCATCGGCGCGAG CGGCGTGTCGG GGC TCGGCACGCTG TTGTCGGGCGCGTAC TERM 2972 2857361 - 2857339 - g 75 -4 -4.61231 | overlap 2857341 CGATATTGCGAAAAA GCTCGATCAG GTG CCGTTCGACC AGATCGGCAAAAACC TERM 2973 2857393 - 2857375 - g 79 -6 -4.61231 | overlap 2857383 CCAGATCGGCAAAAA CCTCAACA CCG CGTTGAAG AACGCCGACCATCTC Bphy_2535 2856008 - 2857642 + | hypothetical protein TERM 2974 2858257 - 2858222 - g 71 -10.4 -3.65529 | AGATTTCGACGGAAA TCGGCGCCGCCG TGCGCAATCTGG CGGCGGTGCCGA CGCGCGGCGCGGCCG Bphy_2536 2857639 - 2858340 + | hypothetical protein Bphy_2537 2858472 - 2859749 + | putative RNA methylase TERM 2975 2859774 - 2859790 + F 100 -11.5 -5.45652 | opp_overlap 2859774 TTACCTCCACAAGAA GCGGGCG CCA TGCCCGC TTTTTTGTTGCACGT TERM 2976 2859790 - 2859774 - f 77 -10.8 -3.79906 | opp_overlap 2859774 TTACCTCCACAAGAA GCGGGC GCCAT GCCCGC TTTTTTGTTGCACGT Bphy_2538 2859921 - 2860304 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_2539 2860388 - 2861074 + | helix-turn-helix type 11 domain-containing protein Bphy_2540 2861588 - 2861193 - | hypothetical protein TERM 2977 2861415 - 2861431 + g 75 -4.3 -4.60041 | overlap 2861374 GGGGCCGGTAGCGTC CGATGGC GGA GTCAACG TTTTTGCCAATGCCT Bphy_2541 2863215 - 2861764 - | NAD(P)(+) transhydrogenase (AB-specific) Bphy_2542 2863539 - 2863216 - | NAD/NADP transhydrogenase alpha subunit-like protein Bphy_2543 2864751 - 2863609 - | NAD(P)(+) transhydrogenase (AB-specific) TERM 2978 2864228 - 2864262 + g 74 -11.2 -3.57144 | opp_overlap 2864248 2864250 ATCGCCTGCAAGCCC GCCACGCCCGCGCCGA GAA TCAGCACGCGCGCGGC TTTCACCGTGCCCGC TERM 2979 2865167 - 2865123 - g 74 -11.4 -3.61398 | gap 1, overlap 2865128 CTGCTGGTTGAAGAA CACACGGCCGCCGGGCTGCGT CTGA AC-CAGCCCGCCGGGCATCTG GAAGTGGGCGAAACG Bphy_2544 2865042 - 2865539 + | NUDIX hydrolase Bphy_2545 2865583 - 2866737 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2980 2868106 - 2868092 - g 72 -11.4 -3.55563 | opp_overlap 2868091 2868090 2868086 2868083 AGGCGATGCTGGAAA CGGGCA TCC TGCCCG ACTTCATCGTTGTCG Bphy_2546 2867113 - 2868726 + | glutamate synthase (NADPH) TERM 2981 2868764 - 2868794 + T 100 -14 -4.44667 | opp_overlap 2868765, overlap 2868765 GATGCGCCATGAAAA ACGCGCGCTGGA CCTGACA TCCAGCGCGCGC TTTCTTGTTGGGCGA TERM 2982 2868765 - 2868793 + T 93 -17.5 -3.26318 | opp_overlap 2868765, overlap 2868764 ATGCGCCATGAAAAA CGCGCGCTGGA CCTGACA TCCAGCGCGCG CTTTCTTGTTGGGCG TERM 2983 2868793 - 2868765 - T 100 -18.2 -4.7254 | opp_overlap 2868765 2868764 ATGCGCCATGAAAAA CGCGCGCTGGAC CTGAC ATCCAGCGCGCG CTTTCTTGTTGGGCG Bphy_2547 2869572 - 2868817 - | peptidase M48 Ste24p TERM 2984 2869667 - 2869649 - R 86 -5.9 -5.07652 | opp_overlap 2869650, overlap 2869644 2869650 CGCCTGAAAAGAAAA GCGCCTG ACGGG CAGGCGT TTTTTTAACATGCAG TERM 2985 2869650 - 2869666 + r 100 -9.4 -5.44119 | opp_overlap 2869649 2869644 2869650 GCCTGAAAAGAAAAG CGCCTG ACGGG CAGGCG TTTTTTTAACATGCA TERM 2986 2869666 - 2869650 - R 72 -9.4 -3.63868 | opp_overlap 2869650, overlap 2869649 2869644 GCCTGAAAAGAAAAG CGCCTG ACGGG CAGGCG TTTTTTTAACATGCA Bphy_2548 2870390 - 2869782 - | glutathione S-transferase domain-containing protein TERM 2987 2871010 - 2871042 + G 71 -9.2 -3.75153 | CGTTTCGGTCCCGAC GGTGCGCG-CGAAGCC TTC GGTTTCGACGCG-GCC TTTGCGTTCGACGAA TERM 2988 2871757 - 2871770 + G 73 -9.5 -3.92869 | opp_overlap 2871757 GAGGTGATCGAAGAA CGCGC CTAC GCGCG TTTCTACATGCATCG Bphy_2549 2870551 - 2872095 + | peptidase M24 TERM 2989 2872643 - 2872612 - g 71 -10 -3.64703 | opp_overlap 2872612 2872626, overlap 2872613 TGCTGCCCATCGAAA GCGCGCACGTCACG CGCA CGTTGCGCACGCGC GTTCTGGTGAGCGCC TERM 2990 2872851 - 2872885 + G 74 -15 -2.57132 | gap 1, opp_overlap 2872869, overlap 2872850 TACGCGCTGGTCTGG TGCTGCGCGCCGCAC GAAGCG GCGCGGCGCGC-GCA ATTGTCGGACGAAGA Bphy_2550 2872119 - 2873339 + | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 2991 2873715 - 2873705 - g 70 -4.6 -4.4267 | overlap 2873710 GTGGAAAAGCGAAAA GACG ATG CGCC GCGCCAATCACACGG TERM 2992 2874232 - 2874258 + G 71 -7.9 -4.08216 | gap 1, overlap 2874237 ACGCAATCATGATCG GCCGTGCGGCGC AGGG GCGCCCC-TGGC TTTTCCGCGAGATCG Bphy_2551 2873535 - 2874608 + | NifR3 family TIM-barrel protein TERM 2993 2874752 - 2874722 - g 81 -7.6 -4.56597 | gap 1, opp_overlap 2874740, overlap 2874723 2874724 TCGTGCGTCGAAAAA CCG-CTGCTCGAG GTGGTG CTCGAGCAGGCCG GCGGCAACCAGTCGC Bphy_2552 2874605 - 2874838 + | Fis family transcriptional regulator Bphy_2553 2874883 - 2876448 + | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 2994 2876473 - 2876501 + F 100 -24.7 -4.83759 | CTGCTTGTTCCGCAA CGGCCCGGCAGTT TGC AACTGCCGGGCCG TTTTTGCATTTGATT Bphy_2554 2876555 - 2877097 + | crossover junction endodeoxyribonuclease RuvC Bphy_2555 2877742 - 2877110 - | lysine exporter protein LysE/YggA Bphy_2556 2877902 - 2878483 + | Holliday junction DNA helicase RuvA TERM 2995 2878541 - 2878558 + F 76 -12.7 -3.05844 | TTTCCTGCGCGACAC CCTGGCC GTTC GGCCAGG TCTTCGAATGGGCCA Bphy_2557 2878566 - 2879657 + | Holliday junction DNA helicase RuvB Bphy_2558 2880382 - 2879711 - | phosphoglycerate mutase Bphy_2559 2880865 - 2880407 - | D-tyrosyl-tRNA(Tyr) deacylase Bphy_2560 2882207 - 2880909 - | tyrosyl-tRNA synthetase TERM 2996 2881362 - 2881380 + g 70 -6 -4.21194 | GATGCTCATTAGCTT GCCGAA CATGTCA TTCGGC TTTTCGCTGATACCG TERM 2997 2882281 - 2882298 + H 79 -12.7 -3.41051 | CTCGGCGCCGCGCAC CCTGGCC GATC GGCCAGG TTGTGATGCAACTCG Bphy_2561 2882379 - 2883515 + | hypothetical protein TERM 2998 2883548 - 2883533 - T 100 -11.8 -5.72622 | opp_overlap 2883533 CGCACAAATAAAAAA CGGGGC CGAA GCCCCG TTTTGCCGCCACTGA TERM 2999 2883533 - 2883548 + T 86 -11.8 -4.08216 | opp_overlap 2883533 CGCACAAATAAAAAA CGGGGC CGAA GCCCCG TTTTGCCGCCACTGA Bphy_2562 2883958 - 2883593 - | iron-sulfur cluster assembly accessory protein TERM 3000 2884124 - 2884089 - R 74 -14 -2.52676 | gap 1 CAGTGGTGTAAGCGA TGTCTCCG-TCCGCCCG CGA CGGGCGGACCGCGGACA CGAAAACAAACAAAA TERM 3001 2884183 - 2884158 - R 100 -11.7 -4.81249 | opp_overlap 2884158 GCGGAAATGCAAAAA GCCGCCTTCGC ATCT GCGTTGGCGGC TTTTTGCTACAGGCC TERM 3002 2884158 - 2884183 + r 100 -11.7 -4.72272 | opp_overlap 2884158 GCGGAAATGCAAAAA GCCGCCTTCGC ATCT GCGTTGGCGGC TTTTTGCTACAGGCC Bphy_2563 2884620 - 2884228 - | ribosomal protein S9 Bphy_2564 2885117 - 2884632 - | ribosomal protein L13 TERM 3003 2885266 - 2885246 - H 100 -12.6 -5.58454 | opp_overlap 2885246 GCCAGACGAAAAAAA GCCCGAAC TAGCG GTTCGGGC TTAATCCACCTTAGG TERM 3004 2885246 - 2885266 + H 79 -13.3 -3.16742 | opp_overlap 2885246 GCCAGACGAAAAAAA GCCCGAACT AGC GGTTCGGGC TTAATCCACCTTAGG Bphy_2565 2885661 - 2886083 + | OsmC family protein TERM 3005 2886108 - 2886147 + T 100 -21.6 -3.53012 | opp_overlap 2886115, overlap 2886115 CGAGCCAAGCGCAGC TGGAAAATGCCGGCGTCC CAAC GGACGCCGGCATTTGTCA TTTGAGCGGCAAAGC TERM 3006 2886140 - 2886115 - T 100 -20.5 -4.11394 | opp_overlap 2886108 2886115 AGCGCAGCTGGAAAA TGCCGGCGTCC CAAC GGACGCCGGCA TTTGTCATTTGAGCG TERM 3007 2886115 - 2886140 + T 100 -20.5 -4.13654 | opp_overlap 2886115, overlap 2886108 AGCGCAGCTGGAAAA TGCCGGCGTCC CAAC GGACGCCGGCA TTTGTCATTTGAGCG TERM 3008 2886373 - 2886393 + T 74 -11.1 -3.61268 | overlap 2886358 GCGTCGCCGCAGCCG CGGTGCGCT CTT ACCGCACCG TTTCACCCTTACCTG Bphy_2566 2887446 - 2886481 - | hypothetical protein Bphy_2567 2888527 - 2887463 - | dihydroorotase, homodimeric type TERM 3009 2888980 - 2888938 - g 89 -4.9 -5.17576 | gap 2 GATCAAGTCAAAAAA CACGAT-TGCCCATA-TCCGC AAG GCGACGCAAGGGCATATCGTG CTCGAGAACTGCCAC Bphy_2568 2888720 - 2889625 + | glutamine amidotransferase class-II Bphy_2569 2890178 - 2889684 - | hypothetical protein TERM 3010 2890400 - 2890421 + r 77 -10.1 -3.84406 | opp_overlap 2890401, overlap 2890401 2890420 TTGGCGTGAAAAAAA AGCCGCTTC CGAA GAAGCGGCC TTCTTGTGATCGAAG TERM 3011 2890420 - 2890401 - R 100 -13.6 -5.75342 | opp_overlap 2890400 2890401 TGGCGTGAAAAAAAA GCCGCTTC CGAA GAAGCGGC CTTCTTGTGATCGAA TERM 3012 2890401 - 2890420 + r 77 -13.6 -2.90322 | opp_overlap 2890401, overlap 2890400 TGGCGTGAAAAAAAA GCCGCTTC CGAA GAAGCGGC CTTCTTGTGATCGAA Bphy_2570 2891169 - 2890444 - | ABC transporter related Bphy_2571 2891843 - 2891166 - | polar amino acid ABC transporter, inner membrane subunit TERM 3013 2891445 - 2891457 + g 73 -9.1 -3.90112 | ATAGCTCATGCCGAG CGCGT ACG ACGCG TTTACTTGCCCGCGC Bphy_2572 2892583 - 2891843 - | polar amino acid ABC transporter, inner membrane subunit TERM 3014 2892635 - 2892604 - R 100 -13.8 -5.09204 | opp_overlap 2892608 AGACTCCAACAAAAA GAAACGGAAGAAGC GCCT GCCCCTTCCGTTCC GTTCAACACGTTGAC Bphy_2573 2893565 - 2892672 - | extracellular solute-binding protein TERM 3015 2893160 - 2893192 + g 78 -15.8 -2.73875 | gap 1, overlap 2893157 TGACGCCCGAATCCT TCTTCGTCATCAGGC GCGT GCC-GATGACGAAGA TCGTGTTCGAGAACG TERM 3016 2893717 - 2893742 + r 87 -9.7 -4.62471 | overlap 2893712 AGCGACTTTACCGGT CGATGCAAACG TCAT CGGTTGCGTCG TTTTTGCCGGTTCCG TERM 3017 2893818 - 2893792 - R 100 -18 -5.09426 | opp_overlap 2893789 2893809 TTCAATTGCAAAAAA GCGGACGGCACC CGA AGTGCCGCCCGC CCGGTATTTTGCGCG TERM 3018 2893873 - 2893859 - R 70 -4.2 -4.56775 | opp_overlap 2893868, overlap 2893860 ATCGCGCTGGAAAAA CGCC GTTGCCT GGCG CCGCGTCCGCGACGG TERM 3019 2893868 - 2893895 + r 95 -17.8 -3.60234 | gap 1, opp_overlap 2893859 2893860, overlap 2893887 GAAAAACGCCGTTGC CTGGCGCCGCGTC CGC GACG-GGCGCCAG TTTCGCCCTGTATCG TERM 3020 2893921 - 2893954 + r 71 -10.3 -3.55622 | gap 1, opp_overlap 2893917, overlap 2893922 TATCGGATATACGCG GGCGCGTCCATGTATC AGG GATACA-GGCCGCGCA TTTCACGCGCTTGAA TERM 3021 2893922 - 2893953 + r 76 -13.8 -2.73159 | gap 1, opp_overlap 2893917, overlap 2893921 ATCGGATATACGCGG GCGCGTCCATGTATC AGG GATACA-GGCCGCGC ATTTCACGCGCTTGA Bphy_2574 2895227 - 2893935 - | Glu/Leu/Phe/Val dehydrogenase TERM 3022 2895291 - 2895272 - R 87 -4.2 -5.41143 | CATTGTCGAAAAAAA GCGCTGGA TGGG TCCAATGC CGTTTGGTCATCCGG Bphy_2575 2896347 - 2895391 - | LysR family transcriptional regulator Bphy_2576 2896525 - 2897913 + | adenylosuccinate lyase Bphy_2577 2898572 - 2898078 - | carbohydrate kinase Bphy_2578 2899944 - 2898583 - | gluconate transporter TERM 3023 2900156 - 2900117 - R 100 -23 -5.72622 | gap 1, opp_overlap 2900117 GCTACAAATAAAAAA CCCCGCCGCTTCAGCC-CG TTT CGAGGCTAAAGCGGCGAGG TTTGCTGACGCACAT TERM 3024 2900117 - 2900156 + r 100 -18.6 -3.72695 | gap 1, opp_overlap 2900117 GCTACAAATAAAAAA CCCCGCCGCTTCAGCC-CG TTT CGAGGCTAAAGCGGCGAGG TTTGCTGACGCACAT TERM 3025 2900172 - 2900199 + r 79 -13.4 -3.08679 | opp_overlap 2900189 TTTGCTGACGCACAT TGCGCGCTGCGT CAAA ACGCGGCGCGGA TCTTCAATGCGCCGG Bphy_2579 2900844 - 2900203 - | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase Bphy_2580 2902774 - 2900861 - | 6-phosphogluconate dehydratase Bphy_2581 2903074 - 2903910 + | RpiR family transcriptional regulator TERM 3026 2903987 - 2903957 - T 87 -16.2 -2.91593 | opp_overlap 2903958 2903963, overlap 2903963 CATGGCTGCATAAAT GCAAAACGGGCTCC GTC GGAGCCCGTTTCGT TTTGAAGCGTACTGC TERM 3027 2903958 - 2903986 + T 100 -17.5 -4.10161 | opp_overlap 2903957 2903963, overlap 2903963 ATGGCTGCATAAATG CAAAACGGGCTCC GTC GGAGCCCGTTTCG TTTTGAAGCGTACTG TERM 3028 2903963 - 2903981 + T 100 -16 -4.19735 | opp_overlap 2903957 2903963, overlap 2903958 TGCATAAATGCAAAA CGGGCTCC GTC GGAGCCCG TTTCGTTTTGAAGCG TERM 3029 2903981 - 2903963 - T 100 -16 -4.39571 | opp_overlap 2903963 2903958, overlap 2903957 TGCATAAATGCAAAA CGGGCTCC GTC GGAGCCCG TTTCGTTTTGAAGCG Bphy_2582 2917223 - 2904069 - | YadA domain-containing protein TERM 3030 2907306 - 2907330 + g 82 -15.7 -3.14211 | CACGTTCACCGCATC CGTGGCTGCCG AAC CCGCAGCCACG TTCGTCACGCGACGT TERM 3031 2907819 - 2907843 + g 82 -15.7 -3.14211 | CACGTTCACCGCATC CGTGGCTGCCG AAC CCGCAGCCACG TTCGTCACGCGACGT TERM 3032 2912730 - 2912754 + g 82 -15.7 -3.14211 | CACGTTCACCGCGTC CGTGGCTGCCG AAC CCGCAGCCACG TTCGTCACGCGACGT Bphy_2583 2918090 - 2921062 + | YadA domain-containing protein TERM 3033 2921157 - 2921114 - T 100 -23.4 -3.44051 | opp_overlap 2921121, overlap 2921121 GCCCGACGACCAGAA GCACAAAGCCCGGTTTGCTG TTTC CAGCAAACCGGGCTTTTTAC ATGCGCTTCGCGAAT TERM 3034 2921150 - 2921121 - T 100 -22.3 -4.11281 | opp_overlap 2921121, overlap 2921114 GACCAGAAGCACAAA GCCCGGTTTGCTG TTTC CAGCAAACCGGGC TTTTTACATGCGCTT TERM 3035 2921121 - 2921150 + T 100 -22.3 -4.67011 | opp_overlap 2921121 2921114 GACCAGAAGCACAAA GCCCGGTTTGCTG TTTC CAGCAAACCGGGC TTTTTACATGCGCTT Bphy_2584 2921608 - 2921186 - | hypothetical protein Bphy_2585 2922906 - 2921635 - | gamma-glutamyl phosphate reductase TERM 3036 2923058 - 2923030 - R 70 -4.3 -4.59109 | overlap 2923032 CACAGGCCGGAAAAA CCGCCGAGCCCCG CAT CGGGACGTGACCG GCCGGTTGCGCGCGC Bphy_2586 2924256 - 2923129 - | DNA polymerase III, delta subunit TERM 3037 2923157 - 2923193 + g 71 -13 -3.01712 | gap 2 CGTAACGGCGCGCTT CGCGCTGACGGCGCCCGT CCG ACCGGCGCCG-C-GTGCG TCTTCGGCGCCGGCG TERM 3038 2923449 - 2923428 - G 71 -7.3 -4.18018 | gap 1 GGTTTTCACGCAAAA GCATGGCAAG CGG CTTGCC-CGC ATCGACGCCGCGCTT TERM 3039 2924090 - 2924043 - G 80 -14.3 -3.34398 | gap 3, overlap 2924041 GCCGGTCGCCAAACA GCGACATCGACTGG--CTCGC-GC CGA GCAGCGAGCTCCAGTCGAAGCCGC GCTCCACCGTGAACA Bphy_2587 2924850 - 2924299 - | rare lipoprotein B Bphy_2588 2927485 - 2924891 - | leucyl-tRNA synthetase TERM 3040 2925409 - 2925426 + g 71 -7.7 -4.08485 | gap 1, opp_overlap 2925408, overlap 2925409 2925405 CGGCGTCGAATGGAG C-GCGCTC GGT GAGCGCAG TTTCGTTTGCCTGAC TERM 3041 2925639 - 2925679 + g 95 -16.2 -3.99592 | gap 1, overlap 2925670 2925674 CCGCCGAGCACGACG GGCTGCCC-GTCGGCGT TCAGCGTC GCGCCGACCGGGCGGCC TTTGTCGTCGTGCGT TERM 3042 2926578 - 2926565 - G 88 -2.3 -5.24531 | opp_overlap 2926570 ATGCGTGACAAAAAA GCCTG TGGC CATGC CCTTCTTTTCCATCG Bphy_2589 2928209 - 2927733 - | biopolymer transport protein ExbD/TolR Bphy_2590 2929018 - 2928266 - | MotA/TolQ/ExbB proton channel TERM 3043 2928813 - 2928790 - G 77 -11.8 -3.64716 | gap 1, overlap 2928788 CCAGCGGGGAAAAGA TGCGT-TCGCG ATC CGCGAGACGCA GTGTCGCCACGCCTT TERM 3044 2928871 - 2928854 - G 80 -14.1 -3.35679 | CGGCGCCAGCCAGAA CCGCGCG ACAG CGCGCGG CCCTTGCCGCTTGGC Bphy_2591 2929878 - 2929081 - | dihydrodipicolinate reductase TERM 3045 2929167 - 2929141 - G 80 -13.6 -3.33696 | GTGGCCTTCAAGGAA GCGCACCGCGCG CAA CGCGCCTTGCGC GTACGACAGACGGCT TERM 3046 2929994 - 2930026 + r 100 -20 -3.01712 | opp_overlap 2929953 TCGCTGCGAGACGCA TGATGGGTGGCCGA CGGAA TCGGCCGCCCATCA TGTTACGGACAACGG Bphy_2592 2930937 - 2930044 - | SmpA/OmlA domain-containing protein TERM 3047 2931385 - 2931372 - g 78 -8.1 -4.35524 | CCCCGAAATCGAAAA TCGCC AGCA GGCGA TCGCGAAAGAACGCG Bphy_2593 2931049 - 2931477 + | ferric uptake regulator family protein TERM 3048 2931535 - 2931495 - T 100 -20 -3.72324 | gap 1, opp_overlap 2931495 2931502, overlap 2931502 CATTTTCAGTAAGAA GCAGAAAGGCCCGGCTGAT GAGA ATCAACCGGGCCTTT-TGC TTTCCCTCGCTTACC TERM 3049 2931495 - 2931535 + T 100 -17.8 -3.68619 | gap 1, opp_overlap 2931495 2931502, overlap 2931502 CATTTTCAGTAAGAA GCAGAAAGGCCCGGCTGAT GAGA ATCAACCGGGCCTTT-TGC TTTCCCTCGCTTACC TERM 3050 2931502 - 2931529 + T 100 -15.6 -4.56914 | opp_overlap 2931495 2931502, overlap 2931495 AGTAAGAAGCAGAAA GGCCCGGCTGAT GAGA ATCAACCGGGCC TTTTGCTTTCCCTCG TERM 3051 2931529 - 2931502 - T 100 -17.8 -4.14859 | opp_overlap 2931502 2931495, overlap 2931495 AGTAAGAAGCAGAAA GGCCCGGCTGAT GAGA ATCAACCGGGCC TTTTGCTTTCCCTCG Bphy_2594 2932080 - 2931568 - | ureidoglycolate hydrolase Bphy_2595 2933121 - 2932111 - | allantoicase TERM 3052 2933193 - 2933165 - R 100 -15.9 -3.6682 | overlap 2933166 TGCGATTGAGTTAAA TGGCGGCGGACCG TCG CGGTCCGCCGCGT TGCCACTGGTGGTCG TERM 3053 2933192 - 2933166 - R 100 -19.4 -2.79878 | overlap 2933165 GCGATTGAGTTAAAT GGCGGCGGACCG TCG CGGTCCGCCGCG TTGCCACTGGTGGTC Bphy_2596 2934558 - 2933230 - | sodium:dicarboxylate symporter TERM 3054 2934866 - 2934818 - g 87 -7.4 -4.79223 | gap 1, overlap 2934820 CGAGATCATGAAAAA CGTCCCGCATACCGTCACTGACG CTGC CATC-GCGACGATCCGCGAGAGG ATCGAAGGCGGCGCT Bphy_2597 2934810 - 2935502 + | GntR domain-containing protein TERM 3055 2935532 - 2935548 + T 74 -2.1 -5.00884 | GACGCAGTCGCCATT CCGGGGT TTC GCTGCGG TTTTTTCGCGGGCAT TERM 3056 2935555 - 2935568 + T 72 -9.5 -3.76226 | TCGCTGCGGTTTTTT CGCGG GCAT CCGCG TTGTGTTATCGGGTT TERM 3057 2935680 - 2935661 - T 100 -9.2 -6.30182 | overlap 2935675 GCAGACAAAAAAAAA GGCCGCCC AAAC GAGCGACC TTCCCGCTGAGGCGA Bphy_2598 2936714 - 2935704 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 3058 2936088 - 2936126 + g 71 -11.8 -3.21416 | gap 1 GCCCGTCTTCGTCGG GATCTG-GCTGTGCGTG GCCGAG CGCGCACGGCGCAGGTC TTCGTGGTACACGTC TERM 3059 2936819 - 2936797 - R 81 -12.6 -3.53012 | GCGCGCCGCCCGAAA CGCGGCGCGC ACG ACGCGCTGCG CGCCTTAGCCGAGTG Bphy_2599 2938842 - 2936824 - | transketolase TERM 3060 2937787 - 2937811 + g 81 -11.3 -4.08216 | opp_overlap 2937802, overlap 2937788 TTCAGCGCGCTCGTT CGCGCCGGCGA TAA TCGCCTGCGCC TTTTCCGCCCAGTCG TERM 3061 2937788 - 2937810 + g 80 -14.8 -3.04715 | opp_overlap 2937802, overlap 2937787 TCAGCGCGCTCGTTC GCGCCGGCGA TAA TCGCCTGCGC CTTTTCCGCCCAGTC Bphy_2600 2939452 - 2939865 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3062 2940212 - 2940260 + G 70 -11.6 -3.33696 | gap 1, overlap 2940213 GTGCCGCTCACCACG ACTCGCAGCGTCGTGCG-GCTCG CCGG CGAGCGCGCGCAACGCCGCCAGG TTCATTGGCAGCGGA TERM 3063 2940213 - 2940259 + G 74 -15.1 -2.60075 | gap 1, overlap 2940212 TGCCGCTCACCACGA CTCGCAGCGTCGTGCG-GCTCG CCGG CGAGCGCGCGCAACGCCGCCAG GTTCATTGGCAGCGG Bphy_2601 2939870 - 2940625 + | hypothetical protein TERM 3064 2940674 - 2940704 + T 100 -15.4 -5.45652 | opp_overlap 2940678, overlap 2940678 GCCCGACTGAAATGC AAAAGGCCCGCCTG TTT CCGGCGGGCCTTTC TTTTTTATTGCAGAT TERM 3065 2940700 - 2940678 - T 100 -16.2 -4.36595 | opp_overlap 2940674 2940678 GACTGAAATGCAAAA GGCCCGCCTG TTT CCGGCGGGCC TTTCTTTTTTATTGC TERM 3066 2940678 - 2940700 + T 100 -16.2 -5.20735 | opp_overlap 2940678, overlap 2940674 GACTGAAATGCAAAA GGCCCGCCTG TTT CCGGCGGGCC TTTCTTTTTTATTGC Bphy_2602 2941309 - 2940749 - | hypothetical protein Bphy_2603 2941727 - 2941326 - | guanine-specific ribonuclease N1 and T1 TERM 3067 2941693 - 2941660 - G 78 -4.3 -4.72272 | overlap 2941661 2941670 GCGCCTGACGAAAAA CCGCCGACAAGACCG CCGA CCGTCAAGGCGGCGA TCAGCACGCCGTCGC TERM 3068 2942030 - 2942052 + r 100 -16.3 -5.75342 | CAGCCATTGCTCGAA GGCGTGCCC ATTGC GGGCACGCC TTTTTTTTGCCCGCG Bphy_2604 2944402 - 2942108 - | malate dehydrogenase TERM 3069 2942624 - 2942608 - G 76 -2.1 -4.9218 | overlap 2942609 TATCGACGAGAAAAA TCTGGCG ATT CGGCAGC ACGAGCGCATTCATC TERM 3070 2945113 - 2945084 - g 75 -12.1 -3.53012 | gap 1, opp_overlap 2945096 CGGTGCCGCCGCAAA CGGCGCTGCGCCGC GAC GCCGCGCAAC-CCG GCGACGATATCTGGA Bphy_2605 2944654 - 2945649 + | thiamine-monophosphate kinase TERM 3071 2945765 - 2945818 + G 100 -20.3 -3.24747 | gap 3, overlap 2945765 2945769 GAAGCTGGCCCGAAC G-GCGC-GCCGCGCGGC-CAGCCGCG CGCGC CGCGGCCGCGCCGCGCGACTGCGCGC TTCATGCTGTCACAC TERM 3072 2945765 - 2945817 + G 91 -20.5 -2.54634 | gap 2, overlap 2945765 2945769 GAAGCTGGCCCGAAC GGCGC-GCCGCGCGGC-CAGCCGCG CGCGC CGCGGCCGCGCCGCGCGACTGCGCG CTTCATGCTGTCACA TERM 3073 2945879 - 2945901 + G 72 -9 -4.1822 | AGCGGCCTTTCGCCC GTCGCGCCCG GCA CGGTCGGGAC TTTGTTCGCGTGGGC Bphy_2606 2945639 - 2946280 + | phosphatidylglycerophosphatase A Bphy_2607 2946320 - 2946820 + | CinA domain-containing protein TERM 3074 2946921 - 2946939 + G 76 -5.9 -4.56597 | CCGCTTCGACCTTCA GCCGCAT CCCGA AGGCGGC TTTTTCCGCGAAACG Bphy_2608 2946871 - 2947383 + | hypothetical protein TERM 3075 2947411 - 2947429 + T 76 -13.2 -3.16564 | opp_overlap 2947409, overlap 2947390 2947390 2947394 CGTGACGCAACGAGC CGCGTTTC AGA GAAACGCG TTGATGCGCTCGCGC Bphy_2609 2948232 - 2947417 - | orotidine 5'-phosphate decarboxylase Bphy_2610 2949414 - 2948356 - | aldose 1-epimerase Bphy_2611 2950548 - 2949619 - | SMP-30/gluconolaconase/LRE domain-containing protein Bphy_2612 2951345 - 2950545 - | short-chain dehydrogenase/reductase SDR TERM 3076 2951121 - 2951170 + g 74 -10.6 -3.78022 | gap 1, opp_overlap 2951121 2951120 2951118 GACATACAGGAAGAG CGGCTTGTGACGCGAATCGCCGA GCTGG TCGGCGAG-CGCGTCGCCCGGCG TTTCGTCGATGTCGA Bphy_2613 2952413 - 2951397 - | monosaccharide-transporting ATPase TERM 3077 2951952 - 2951912 - G 71 -13.9 -2.78463 | opp_overlap 2951907 2951934, overlap 2951898 2951939 2951943 2951944 ACGTGTCCGACGACA CGCCCACGGCCTGACCGTG CGA CACGATGAAGCCGAGGCCG CGCACGATTTCCATC Bphy_2614 2954025 - 2952511 - | ABC transporter related TERM 3078 2953815 - 2953828 + g 72 -6.7 -4.2828 | opp_overlap 2953801, overlap 2953811 ACGCGCCCGCATTCG CGAAG CGCA CTTCG TTTTCGTCGATCAGC Bphy_2615 2955107 - 2954109 - | monosaccharide-transporting ATPase TERM 3079 2954475 - 2954487 + g 70 -5.5 -4.24204 | overlap 2954476 CAGCGCGATATTCGC TGCGT TGA ACGCG TTTTCCGTGTCCGTC Bphy_2616 2956069 - 2955293 - | short-chain dehydrogenase/reductase SDR TERM 3080 2955443 - 2955493 + g 71 -12.5 -3.30038 | overlap 2955440 CAGGTCGAGCGTCGC CTGCTTCGCGGC-GGCGGGATCGGC CTG GCCG-TCCCACCAGTCGCGCGTCAG TTGCGTTTCGATGTA Bphy_2617 2956746 - 2956066 - | KDPG and KHG aldolase Bphy_2618 2957839 - 2956799 - | 2-keto-3-deoxy-galactonokinase Bphy_2619 2958789 - 2957836 - | IclR family transcriptional regulator TERM 3081 2958939 - 2958978 + H 100 -14.2 -3.89614 | gap 1, overlap 2958940 GTCTCCAATATTCGT C-CCGCTTCTGCGACGCGC ATT GCGCGACGGCGAAGCGGTG TTTCTGCCCGTTACG TERM 3082 2958940 - 2958976 + H 95 -17.9 -3.5362 | overlap 2958939 TCTCCAATATTCGTC CCGCTTCTGCGACGCGC ATT GCGCGACGGCGAAGCGG TGTTTCTGCCCGTTA Bphy_2620 2959327 - 2959839 + | OmpA domain-containing protein TERM 3083 2959887 - 2959861 - T 100 -15.3 -5.32944 | opp_overlap 2959861 TTCAGAAGCAAAAAA CGGCGATTATC TGCAC GATAATCGCCG TTTCGATTTGCGCCG TERM 3084 2959861 - 2959887 + T 100 -15.3 -3.84451 | opp_overlap 2959861 TTCAGAAGCAAAAAA CGGCGATTATC TGCAC GATAATCGCCG TTTCGATTTGCGCCG Bphy_2621 2960655 - 2959915 - | monofunctional biosynthetic peptidoglycan transglycosylase Bphy_2622 2961577 - 2960705 - | shikimate 5-dehydrogenase TERM 3085 2961550 - 2961560 + g 70 -4.6 -4.41494 | TCACCGCATATTTGT CGCG CGG CGTG TTTTGATTCGAGCTC Bphy_2623 2963679 - 2961574 - | ribonuclease II TERM 3086 2961713 - 2961731 + g 75 -7.4 -4.2461 | overlap 2961721 2961724 TCGCTTTCGGCGGAT TCGTCGGC GGC GTCGATGA TTTCTTCGTCGACCT TERM 3087 2963063 - 2963044 - G 78 -10.7 -4.0492 | GAATTCCGACAGAAA GCGCGCT TCGTGC AGCGCGC GGGCGGACGGAATGC Bphy_2624 2964408 - 2963806 - | hypothetical protein Bphy_2625 2965814 - 2964405 - | UDP-N-acetylmuramate TERM 3088 2965823 - 2965838 + H 74 -8.2 -4.18018 | TGTGCATAAAGCTGT CGCGCC GCAA GGCGTG TTTTGCGTGGAAAGA Bphy_2626 2966029 - 2966682 + | hypothetical protein Bphy_2627 2966709 - 2967257 + | redoxin domain-containing protein Bphy_2628 2967452 - 2967916 + | 3-dehydroquinate dehydratase, type II Bphy_2629 2967985 - 2968455 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 3089 2969937 - 2969911 - g 71 -7.8 -4.12188 | overlap 2969912 CCATTACCTCGAAAA CCGGCTGGCCGC GAA GCTGCAAGCCGC ACCGGAAGAAGCGTA Bphy_2630 2968568 - 2969953 + | acetyl-CoA carboxylase, biotin carboxylase TERM 3090 2970355 - 2970308 - g 88 -15.6 -3.32963 | gap 1 ATTCCGATCGGAGAA CGCATCTGGGTCGTGC-CATCGT GGC ACGATGCGCCCGATCCGGACGCG CTCGTGCTCGAACTC Bphy_2631 2969957 - 2970859 + | ribosomal protein L11 methyltransferase TERM 3091 2971190 - 2971158 - g 86 -14.9 -3.54459 | overlap 2971138 CGAATGGCGCTCAAA CGCC-GGCGCCGGGC GCGCA GCCC-GCGCCTGGCG AGCGCGTCGCCGCCG TERM 3092 2971928 - 2971918 - g 72 -8.2 -4.07568 | opp_overlap 2971917 GCCGTCGCGCGAAAA GCCC AAC GGGC CTGCATTCGCAGCCG Bphy_2632 2970929 - 2972656 + | Zinc finger-domain-containing protein TERM 3093 2973179 - 2973169 - g 72 -6.8 -4.2828 | overlap 2973170 CGTCATCGACGAAAA CGAC AAG GTCG TGCATGCCGAACTCG Bphy_2633 2972750 - 2973250 + | redoxin domain-containing protein TERM 3094 2973273 - 2973304 + F 100 -22.4 -3.62096 | gap 1, opp_overlap 2973273, overlap 2973294 CTTCGCGTCGATATA GCGCCGCGCCCGTAT CGC AT-CGGGCGCGGCGC TTTCACATCGTCGCG TERM 3095 2973304 - 2973273 - f 100 -22.4 -2.87132 | gap 1, opp_overlap 2973273 2973294 CTTCGCGTCGATATA GCGCCGCGCCCGTAT CGC AT-CGGGCGCGGCGC TTTCACATCGTCGCG TERM 3096 2973294 - 2973322 + F 100 -13.8 -5.14563 | opp_overlap 2973273, overlap 2973273 CGCCCGTATCGCATC GGGCGCGGCGCT TTCAC ATCGTCGCGCCC TTTTTTCCTCCGACC Bphy_2634 2973360 - 2974304 + | ribokinase-like domain-containing protein TERM 3097 2974359 - 2974376 + F 73 -12.7 -2.75844 | overlap 2974358 CCGTTCGGGTTTGGA GGGCTCG ATTA CGAGCCC GTTTGGAGTCAAAGG Bphy_2635 2974393 - 2974881 + | 17 kDa surface antigen TERM 3098 2974935 - 2974958 + T 100 -10.3 -5.93809 | GTCGGCAACCTCACA CGCATGCGC TCCCCT GTGCATGCG TTTTTTTTGTCCGGC TERM 3099 2975058 - 2975031 - T 100 -20.6 -5.55664 | opp_overlap 2975026 CCACGACGAAAAAAA TCCCGCCGCCAG TAAA CCGGCGGCGGGA TCAGATGTGATCGAG Bphy_2636 2975743 - 2975129 - | hypothetical protein TERM 3100 2975294 - 2975315 + g 71 -4.3 -4.56597 | overlap 2975283 2975286 2975292 2975307 CTTCGCAGGCGCAGC GGCCGCC TTCTTCGC GGCAGCC TTTTTCGCAGGCGCA TERM 3101 2975325 - 2975348 + g 76 -5.9 -4.56597 | gap 1, overlap 2975307 2975339 GCAGCCTTTTTCGCA GGC-GCAGCC TTTTT GGCGGCAGCC TTTTTAGCAGGCGCC Bphy_2637 2976100 - 2975774 - | hypothetical protein TERM 3102 2975846 - 2975802 - G 81 -11.4 -4.07885 | gap 1, opp_overlap 2975801 2975805 CACCCTTCGTCAAAA CCCGCTTC-CCGCGGACGC TTCTCACG GCGGCCACTGCGAAGCGGG CTATTCATCGGCGTA TERM 3103 2975975 - 2975998 + g 100 -12.4 -4.56597 | overlap 2975972 2975971 CAATCGTTTGATCGA GCCGCTCGCT TTAT AGCGAACGGC TTTTTCCGGGGGGAA Bphy_2638 2977403 - 2976180 - | ribonucleoside-diphosphate reductase Bphy_2639 2981008 - 2978015 - | ribonucleoside-diphosphate reductase, alpha subunit TERM 3104 2981234 - 2981252 + r 72 -4.4 -4.66163 | opp_overlap 2981237 CACCGGTTGCTCTAA CCAGTTGC GCC GCATCAGG TTTTTCAGTGCCGGT Bphy_2640 2982133 - 2981495 - | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Bphy_2641 2982444 - 2982130 - | hypothetical protein Bphy_2642 2983394 - 2982450 - | cytochrome c assembly protein TERM 3105 2982516 - 2982489 - G 77 -5.4 -4.65933 | overlap 2982512 CACCTCGAAAACAAA GCGGCTGCCGAC ATAC GCAAGCAGCAGC GCGACGAACGACGCG TERM 3106 2982563 - 2982525 - G 72 -13 -3.15861 | overlap 2982512 2982528 CAGCAGCGCGACGAA CGACGCGAGCACCCAGCG CAA CGCCGCGCGCCCACGCCA GCCCGACACCTTGCG Bphy_2643 2983475 - 2984842 + | signal recognition particle protein Bphy_2644 2984997 - 2985548 + | phosphoribosyltransferase TERM 3107 2985611 - 2985582 - T 86 -12.3 -4.09243 | opp_overlap 2985589, overlap 2985589 TACAGCGCTGCAAAA TAAAAAAGCGACC TGCG GGTCGCTTTTTTG TTGGCCGGATGGCCA TERM 3108 2985604 - 2985589 - T 100 -10.4 -5.79595 | opp_overlap 2985589, overlap 2985582 CTGCAAAATAAAAAA GCGACC TGCG GGTCGC TTTTTTGTTGGCCGG TERM 3109 2985589 - 2985604 + T 100 -10.4 -5.4505 | opp_overlap 2985589 2985582 CTGCAAAATAAAAAA GCGACC TGCG GGTCGC TTTTTTGTTGGCCGG Bphy_2645 2986236 - 2985631 - | multiple antibiotic resistance (MarC)-related protein Bphy_2646 2987985 - 2986249 - | prolyl-tRNA synthetase TERM 3110 2987040 - 2986999 - G 71 -13.8 -2.70932 | opp_overlap 2987034 CGGCGTGCCGAACCA CTCGACGATTTCCTCTTC CGTCGC GAAGCGGAATTCGCCGAG GCCCGGCAGCTTGTT TERM 3111 2988024 - 2988002 - H 71 -6.9 -4.12198 | gap 1, overlap 2988003 CAGAATTTTCCAAAA GCGGCGGACC AAAG GGACCGCC-C GAAAGGGGTAAGACG Bphy_2647 2988267 - 2988962 + | NUDIX hydrolase TERM 3112 2988989 - 2989021 + F 95 -17.7 -3.53811 | opp_overlap 2989009, overlap 2988990 TGTCCACGCCGCATC TGCCGGTGCGGCGTG AGA TACGCTGCGCCGGCG TTTCGAGGGAATCAC TERM 3113 2988990 - 2989020 + F 100 -19 -2.72144 | opp_overlap 2989009, overlap 2988989 GTCCACGCCGCATCT GCCGGTGCGGCGTG AGA TACGCTGCGCCGGC GTTTCGAGGGAATCA Bphy_2648 2989038 - 2989616 + | CNP1-like protein of unknown function TERM 3114 2989651 - 2989675 + T 100 -11.4 -5.0925 | opp_overlap 2989651, overlap 2989631 CAGCGGCAACAAAAA GCCGTCCCAT CGTTT ACGGGACGGC TTTTTGATTTTCGAC TERM 3115 2989675 - 2989651 - T 100 -13.6 -5.07486 | opp_overlap 2989631 2989651 CAGCGGCAACAAAAA GCCGTCCCAT CGTTT ACGGGACGGC TTTTTGATTTTCGAC Bphy_2649 2990823 - 2989705 - | glutamate 5-kinase TERM 3116 2990394 - 2990404 + g 79 -6.8 -4.46615 | overlap 2990390 TGATCTCATCGGTCA CGAC AGT GTCG TTTTCGTTAATGATG Bphy_2650 2992013 - 2990901 - | GTP-binding protein Obg/CgtA TERM 3117 2992145 - 2992167 + r 100 -14.8 -5.1101 | opp_overlap 2992145 CGCCGCAAACAAAAA GGCCCCGCAA ACT TCGCGGGGCC TTTTTTCGGTCCTGA TERM 3118 2992167 - 2992145 - R 100 -17 -5.27335 | opp_overlap 2992145 CGCCGCAAACAAAAA GGCCCCGCAA ACT TCGCGGGGCC TTTTTTCGGTCCTGA Bphy_2651 2992462 - 2992202 - | ribosomal protein L27 Bphy_2652 2992798 - 2992487 - | ribosomal protein L21 TERM 3119 2992749 - 2992779 + g 74 -2.4 -4.83169 | overlap 2992774 ACTTTAAGTTTTTCG CCGACAGCAACC TTGTACT GCTTGCCGCCGG TTTTTATGACCGCGT TERM 3120 2992944 - 2992927 - H 82 -10.5 -4.15044 | CCCGTGCGTAACAAA CCGCGCG AAAC CACGCGG AAACGGACCGAAACC Bphy_2653 2993037 - 2994029 + | polyprenyl synthetase TERM 3121 2994173 - 2994187 + F 100 -9.2 -5.86965 | opp_overlap 2994173 GATTCTTCAAAAAAA CCGTGC ACT GCGCGG TTTTTTTTCGTCCGT TERM 3122 2994187 - 2994173 - f 95 -7 -5.41143 | opp_overlap 2994173 GATTCTTCAAAAAAA CCGTGC ACT GCGCGG TTTTTTTTCGTCCGT Bphy_2654 2994406 - 2995623 + | hypothetical protein Bphy_2655 2995672 - 2996970 + | type II secretion system protein E TERM 3123 2997300 - 2997269 - g 80 -14.4 -3.3482 | gap 1, opp_overlap 2997296, overlap 2997251 2997257 CAACGCGCGAACCAA GGGCATGC-CGCGCA TCG TGCGCGCGCTCGCCC GCGACATAACGGCAG Bphy_2656 2996967 - 2998190 + | type II secretion system protein Bphy_2657 2998222 - 2999151 + | prepilin peptidase Bphy_2658 2999155 - 2999757 + | dephospho-CoA kinase Bphy_2659 2999953 - 3000708 + | hypothetical protein Bphy_2660 3000768 - 3000962 + | hypothetical protein TERM 3124 3000979 - 3000937 - T 76 -13.3 -2.82933 | overlap 3000939 3000950 CGCCAACCGACGACA CACCCGGCGAACACCGCTC GCACT GAACGGCGACCGCAGGGCG TTGCACATCGAAAAA TERM 3125 3000977 - 3000939 - T 71 -12.3 -2.9627 | overlap 3000937 3000950 CCAACCGACGACACA CCCGGCGAACACCGCTC GCACT GAACGGCGACCGCAGGG CGTTGCACATCGAAA TERM 3126 3001007 - 3000995 - T 72 -4.7 -4.70659 | opp_overlap 3000995, overlap 3000996 TTGCACATCGAAAAA GGCGG AAG CCGCA TACGGCGATTCCTCC Bphy_2661 3001472 - 3001029 - | NUDIX hydrolase Bphy_2662 3002338 - 3001469 - | hypothetical protein Bphy_2663 3003620 - 3002379 - | arginine biosynthesis bifunctional protein ArgJ TERM 3127 3003662 - 3003645 - R 84 -12.7 -3.70902 | CTGTCGAGACTGAAA TGCCGGC GGAC GCCGGCA TTGGGGATCAAGGGT TERM 3128 3003765 - 3003734 - R 91 -16.6 -3.5594 | gap 1, opp_overlap 3003737 3003738 3003762, overlap 3003722 3003737 AATGCACGCTTCAAA CGACG-CGGCGCGCA TGA TGCGCGCCGCCTTCG TGTGTCACGCAATCT TERM 3129 3003737 - 3003761 + r 90 -17.1 -3.32022 | opp_overlap 3003722 3003734 3003737, overlap 3003738 GCACGCTTCAAACGA CGCGGCGCGCA TGA TGCGCGCCGCC TTCGTGTGTCACGCA TERM 3130 3003761 - 3003737 - R 88 -17.1 -2.91144 | opp_overlap 3003737 3003738, overlap 3003722 3003734 GCACGCTTCAAACGA CGCGGCGCGCA TGA TGCGCGCCGCC TTCGTGTGTCACGCA TERM 3131 3003738 - 3003760 + r 100 -20.6 -2.58999 | opp_overlap 3003722 3003737 3003734, overlap 3003737 CACGCTTCAAACGAC GCGGCGCGCA TGA TGCGCGCCGC CTTCGTGTGTCACGC Bphy_2664 3006580 - 3003770 - | preprotein translocase, SecA subunit TERM 3132 3004147 - 3004157 + g 80 -4.6 -4.84359 | CTTCGCGCTTGTATT CCTG CTT CGGG TTTTTCTGCGCGTAG TERM 3133 3004932 - 3004960 + g 89 -5.1 -5.1356 | overlap 3004933 TGCAGCGTCTGCCAC TCGTCGTGCAACT TCT GGATGCGCGGCGC TTTTTCTTCCTCGGG TERM 3134 3007308 - 3007288 - g 72 -8.2 -4.07568 | overlap 3007291 CCGGCGCGTGCAAAA GAGGCGCG CATGT CGCGCGTC GGCGCCGATGCACTG Bphy_2665 3006859 - 3007401 + | hypothetical protein TERM 3135 3007434 - 3007451 + T 85 -9.8 -4.46615 | opp_overlap 3007434, overlap 3007429 GCACCACATGAAAAA GCGGCC CGTACA GGCCGC TTTTCGTTGCTGCTC TERM 3136 3007451 - 3007434 - T 95 -10.5 -4.82667 | opp_overlap 3007429 3007434 GCACCACATGAAAAA GCGGCCC GTAC AGGCCGC TTTTCGTTGCTGCTC Bphy_2666 3008407 - 3007490 - | UDP-3-0-acyl N-acetylglucosamine deacetylase TERM 3137 3008099 - 3008081 - G 70 -5.9 -4.24745 | GATCAGGAACACAAA GGACGCC GCGCT GCCGTCC ATGATGGGGATTTCT TERM 3138 3008432 - 3008443 + r 86 -4.4 -5.30155 | opp_overlap 3008432 CTATTCGATTGAAAA TCCT AATC AGGA TTTTTTAATTCATAG Bphy_2667 3009186 - 3008677 - | redoxin domain-containing protein Bphy_2668 3010616 - 3009423 - | cell division protein FtsZ Bphy_2669 3011970 - 3010738 - | cell division protein FtsA TERM 3139 3011806 - 3011829 + g 81 -3.1 -5.03747 | gap 1 GATGGACTGCACCGT GGCCTCGATG TTCAC CA-CGACGCC TTTTTTGAGCCCTTT Bphy_2670 3012750 - 3011998 - | polypeptide-transport-associated domain-containing protein TERM 3140 3012402 - 3012430 + g 84 -13.2 -3.71284 | CGTCGGTGCTCACCA GCTGATCGGTAC CCCAT GTGCCGATCGGC TTGTATTCCTCCAGC TERM 3141 3012715 - 3012697 - G 74 -13.2 -3.23692 | overlap 3012700 CAGCACGAGCAGCAA CAACGCGT GCA ACGCGTTG GCGGCGAGGTTGAGC TERM 3142 3012712 - 3012700 - G 71 -9.1 -3.75738 | overlap 3012697 CACGAGCAGCAACAA CGCGT GCA ACGCG TTGGCGGCGAGGTTG Bphy_2671 3013707 - 3012766 - | D-alanine--D-alanine ligase Bphy_2672 3015098 - 3013704 - | UDP-N-acetylmuramate--alanine ligase Bphy_2673 3016216 - 3015095 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Bphy_2674 3017496 - 3016213 - | cell division protein FtsW TERM 3143 3016856 - 3016818 - G 83 -14.6 -3.23853 | overlap 3016816 3016852 CGCCGCCAAGGAACA GCACGCCCATCGCGATCG CCG CGATCACCATGAACGCGC CCATATCGGGTTCGA Bphy_2675 3019007 - 3017493 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 3144 3017626 - 3017651 + g 81 -13.3 -3.62597 | gap 1, opp_overlap 3017606, overlap 3017632 3017633 3017636 GCGTCGCCCGGTTGC GCGACG-GCGCT CGC GGCGCGCGTCGC TTCTTCGAGCGTGGC Bphy_2676 3020237 - 3019068 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 3145 3019129 - 3019144 + g 70 -4.6 -4.41348 | opp_overlap 3019129, overlap 3019125 GTGATGATCCAGAAG CGCACG ACCA CCTGCG TTTCTTTCCAGCCCG Bphy_2677 3021667 - 3020255 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 3146 3020282 - 3020325 + g 75 -7.4 -4.25104 | gap 1, overlap 3020256 3020255 3020287 3020314 GGGCGCCGTGCCCGG TGCAGCGGGTTGTGGAC-TCG TAA CGGCGTCCACCACGCGTTCCA TTTTCATGAAGCGCG Bphy_2678 3023202 - 3021664 - | UDP-N-acetylmuramyl-tripeptide synthetase TERM 3147 3022041 - 3022082 + g 72 -8.6 -4.15222 | gap 2, opp_overlap 3022038, overlap 3022042 ACATGCAGATCAGCT TGCCG-CCCCGC-GCGTCCG CGAT CGGGCGCAGCGCGGTCAGCG TTTGTTCAAGCGCGT TERM 3148 3023153 - 3023114 - G 75 -12 -3.53444 | opp_overlap 3023107, overlap 3023115 3023151 CTATCGGCGTGCAAA TGTGCGCCTGGCTGCGCA TGCG CGCGCAGCCAGGCAAGCG CTTCAGCAATCTGCT TERM 3149 3023152 - 3023115 - G 78 -15.5 -2.71924 | opp_overlap 3023107, overlap 3023114 3023151 TATCGGCGTGCAAAT GTGCGCCTGGCTGCGCA TGCG CGCGCAGCCAGGCAAGC GCTTCAGCAATCTGC Bphy_2679 3025073 - 3023199 - | peptidoglycan glycosyltransferase Bphy_2680 3025420 - 3025070 - | cell division protein FtsL Bphy_2681 3026370 - 3025417 - | S-adenosyl-methyltransferase MraW Bphy_2682 3026715 - 3026386 - | hypothetical protein TERM 3150 3026442 - 3026456 + g 70 -7.8 -3.9941 | ACATCGCTTCCTGTT CCTGCG CGT CGTAGG TTTCCTTGTCCCAGA TERM 3151 3026943 - 3026975 + r 76 -3.3 -4.93877 | opp_overlap 3026934 3026943, overlap 3026938 3026944 3026953 GAGTAACCCCCAACA CCGGTCAAGGGAGCG GCG CGCTTTTTTCGCCGA TTTTGTTTGCTAGAA TERM 3152 3026953 - 3026963 + r 77 -2.4 -5.03747 | opp_overlap 3026943, overlap 3026944 3026943 3026938 CAACACCGGTCAAGG GAGC GGC GCGC TTTTTTCGCCGATTT Bphy_2683 3027778 - 3027215 - | hypothetical protein Bphy_2684 3028136 - 3029344 + | porin TERM 3153 3029373 - 3029390 + T 100 -12.7 -5.5112 | CGTAGTAACCCTCGA GGGCGTC TTCG GACGCCC TTTTTTATTGGTGCG TERM 3154 3029472 - 3029435 - T 100 -25.1 -3.88787 | opp_overlap 3029435 3029438, overlap 3029438 CGATACCCGCACAAA GAATACGGCCCAACGGT CTAC ACCGTCGGGCCGTATTC TTTGCGCGAGCTGCG TERM 3155 3029435 - 3029472 + T 100 -22.9 -3.53811 | opp_overlap 3029435 3029438, overlap 3029438 CGATACCCGCACAAA GAATACGGCCCAACGGT CTAC ACCGTCGGGCCGTATTC TTTGCGCGAGCTGCG TERM 3156 3029469 - 3029438 - T 100 -21 -4.07133 | opp_overlap 3029435 3029438, overlap 3029435 TACCCGCACAAAGAA TACGGCCCAACGGT CTAC ACCGTCGGGCCGTA TTCTTTGCGCGAGCT TERM 3157 3029438 - 3029469 + T 100 -18.8 -3.90922 | opp_overlap 3029438 3029435, overlap 3029435 TACCCGCACAAAGAA TACGGCCCAACGGT CTAC ACCGTCGGGCCGTA TTCTTTGCGCGAGCT Bphy_2685 3031222 - 3029549 - | AMP-dependent synthetase and ligase TERM 3158 3031132 - 3031101 - G 81 -9.4 -4.26188 | gap 1, opp_overlap 3031102 3031105, overlap 3031094 CCCATACACGCAAAA GCGGGCTTCGCGCGA TTG TCGCG-GAAGCTCTC CTCGAGCAACGAGGT Bphy_2686 3033475 - 3031397 - | molybdopterin oxidoreductase TERM 3159 3033007 - 3032990 - G 71 -4.1 -4.56597 | GCTCTCGGCGAAAAA CTCGG TGTGCATG CCGAG ACTCGCGCCATACGT Bphy_2687 3033648 - 3034841 + | amidohydrolase TERM 3160 3035087 - 3035052 - T 100 -17.6 -3.89822 | CATCGACCGCACAAA CGCCAAGACCCCGC TTTTGAGG GCGGGGTCATGGCG ATGGATAAGGAGCCT TERM 3161 3037738 - 3037749 + T 71 -7.2 -4.2354 | AGGATCTGTTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 3162 3040778 - 3040803 + T 89 -6.7 -5.03145 | opp_overlap 3040764 AGAGCGGAATTCTAG GCGCTCGCGTG AGCA CTTGCAAGCGC TTTTTTGACGAGTTC Bphy_2688 3041597 - 3040821 - | enoyl-CoA hydratase/isomerase Bphy_2689 3041734 - 3043425 + | phenylacetic acid degradation protein paaN Bphy_2690 3043567 - 3044769 + | beta-ketoadipyl CoA thiolase TERM 3163 3044954 - 3044994 + G 100 -17.6 -4.08767 | gap 1, opp_overlap 3044927 ACGAAGTCGAGGCCT CCCGTGCGCGTGCCCTCGT GCTG ACGGGGGCAGGC-CGCGGG TTTTGCGCCGGTCAG TERM 3164 3045588 - 3045576 - g 79 -10.5 -4.18018 | CGCGTTCATCGAAAA GCGCG CAC CGCGC TTCGAGGGCCGCTGA Bphy_2691 3044812 - 3045603 + | phenylacetate degradation, enoyl-CoA hydratase paaB Bphy_2692 3045605 - 3046066 + | phenylacetic acid degradation protein PaaD TERM 3165 3046199 - 3046178 - g 85 -12.3 -4.1899 | gap 1 CGATCCGATCGAAAA GGCGAGC-CG CGA CGAGCTCGCC GGGCTTCAACTCGAA Bphy_2693 3046143 - 3047447 + | phenylacetate-CoA ligase TERM 3166 3047520 - 3047481 - T 100 -20.8 -4.82901 | opp_overlap 3047486, overlap 3047482 GCCGGCTGACAAAAA CGAAAGCCCGACGGCGGT GATG ACAGCCGTCGGGCTTTCC AGTTCAGGCAACGGC TERM 3167 3047519 - 3047482 - T 100 -24.3 -3.49419 | opp_overlap 3047486, overlap 3047481 CCGGCTGACAAAAAC GAAAGCCCGACGGCGGT GATG ACAGCCGTCGGGCTTTC CAGTTCAGGCAACGG TERM 3168 3047486 - 3047515 + T 100 -19.3 -3.66178 | opp_overlap 3047482 3047481 CTGACAAAAACGAAA GCCCGACGGCGGT GATG ACAGCCGTCGGGC TTTCCAGTTCAGGCA Bphy_2694 3048796 - 3047564 - | MltA domain-containing protein TERM 3169 3047901 - 3047891 - G 74 -4.6 -4.57073 | overlap 3047893 CATCTCGCGGAAAAA CACG AAG CGCG GATTCGTATCGAGCA Bphy_2695 3049289 - 3048915 - | ApaG domain-containing protein TERM 3170 3049516 - 3049528 + H 87 -7.7 -4.8048 | opp_overlap 3049461 CGGCGCGCCACCCAG CGCTA AAA TAGCG TTTTTCGTCTCCCGC Bphy_2696 3049556 - 3050239 + | ribulose-phosphate 3-epimerase Bphy_2697 3050241 - 3050963 + | phosphoglycolate phosphatase TERM 3171 3052313 - 3052271 - g 75 -7.7 -4.25104 | overlap 3052272 3052280 CGTGCGTCAGGAAAA GCGCAACGA-CGACCGCATCG TCA CGATCCGGCCGCTCGCGG-GC ACGCGTCCGCGTGGC TERM 3172 3052838 - 3052817 - g 88 -13.7 -3.8397 | gap 1 AGAGACGGAGAACAA GGCGCGC-GC CGT GCTGCGCGCC GCCGAGCAGGTCCAA Bphy_2698 3051384 - 3052877 + | anthranilate synthase component I Bphy_2699 3052890 - 3053477 + | glutamine amidotransferase of anthranilate synthase TERM 3173 3053470 - 3053458 - f 71 -6.9 -4.17023 | overlap 3053438 TGAAGCAGTCGAAAA CCGCG GCA CGCAG CGCCTGAATATAAGA TERM 3174 3053676 - 3053648 - g 81 -3 -5.00616 | gap 1, opp_overlap 3053659, overlap 3053650 3053664 CTGCGCGTCAAAAAA GAGACCATCGGCG AAAT CACCG-CGGCCGC CACGGTGATGCGTGA TERM 3175 3053684 - 3053664 - g 81 -13.3 -3.5627 | opp_overlap 3053659, overlap 3053650 3053648 AGACCATCGGCGAAA TCACCGCGG CCG CCACGGTGA TGCGTGAGTTCGCGC TERM 3176 3054009 - 3053991 - g 72 -11.7 -3.44284 | overlap 3053989 CCGCGATGAAGAACA TCGCGCC CGTGC GGCGCGA ACTCGGCGTGCGGAC Bphy_2700 3053498 - 3054526 + | anthranilate phosphoribosyltransferase Bphy_2701 3054545 - 3055330 + | indole-3-glycerol-phosphate synthase TERM 3177 3055538 - 3055517 - g 76 -9.3 -4.07568 | overlap 3055474 TCGCGCGCGCGAAAA GCGCGGTGC GCGT GCGCCGCAC GCCGGACGGCTGGCT TERM 3178 3055840 - 3055830 - g 72 -8.2 -4.11216 | CGTGGACGGTGAAAA GCGC CGC GCGC CGATCTGCGAGATCG Bphy_2702 3055360 - 3055995 + | adenylate cyclase TERM 3179 3056032 - 3056063 + F 75 -10.2 -3.72893 | opp_overlap 3056015 GGCGGCGAGCGTGCA CGCGAACGCG AGGAACCTTGAG CGCGTTCGCG TTTGCTGCCACACTA Bphy_2703 3056086 - 3056898 + | uracil-DNA glycosylase TERM 3180 3056985 - 3056937 - T 74 -6 -4.4767 | opp_overlap 3056944 3056949, overlap 3056949 CGACCGATCAGAAAA TCCAAAGAAGAACGCCACGGAA TCGTG TTCCGTGGCGTTGTATTTTGCC GTCGCGATTCAGCCG TERM 3181 3056944 - 3056978 + T 90 -12.2 -4.13945 | opp_overlap 3056937 3056949, overlap 3056949 TCAGAAAATCCAAAG AAGAACGCCACGGAAT CGT GTTCCGTGGCGTTGTA TTTTGCCGTCGCGAT TERM 3182 3056949 - 3056973 + T 100 -16.5 -3.96506 | opp_overlap 3056937 3056949, overlap 3056944 AAATCCAAAGAAGAA CGCCACGGAAT CGT GTTCCGTGGCG TTGTATTTTGCCGTC TERM 3183 3056973 - 3056949 - T 100 -15.8 -4.13254 | opp_overlap 3056949 3056944, overlap 3056937 AAATCCAAAGAAGAA CGCCACGGAA TCGTG TTCCGTGGCG TTGTATTTTGCCGTC Bphy_2704 3057650 - 3057054 - | NAD(P)H dehydrogenase (quinone) TERM 3184 3057780 - 3057724 - R 75 -5.8 -4.56597 | gap 1, opp_overlap 3057727 3057729, overlap 3057727 3057728 CCCGTCCGGGAAAAA GTACCGCGGCGGCGACGGATTGTTGCA ACGA TAGAACAATCCGCCGTCGC-GCTTTGC CTGATGGACGGTGAG TERM 3185 3057729 - 3057775 + r 81 -11.7 -3.68351 | gap 2, opp_overlap 3057728 3057727 3057724, overlap 3057727 CCGGGAAAAAGTACC GCGGCGGCGACGGATTGTTGCAA CGA TAG-AACAATCCGCCGTCGC-GC TTTGCCTGATGGACG Bphy_2705 3059660 - 3057867 - | peptidase M61 domain-containing protein TERM 3186 3059734 - 3059708 - R 82 -10.8 -4.14392 | opp_overlap 3059712, overlap 3059710 3059712 TCGGAAGGCTCAAAA CACAGGAGGCGC CTC GCGCCTCCTTTC AACAACGTTCAGACG TERM 3187 3059732 - 3059710 - R 88 -13.4 -3.67 | opp_overlap 3059712, overlap 3059708 3059712 GGAAGGCTCAAAACA CAGGAGGCGC CTC GCGCCTCCTT TCAACAACGTTCAGA TERM 3188 3059730 - 3059712 - R 89 -16 -3.41023 | opp_overlap 3059712, overlap 3059710 3059708 AAGGCTCAAAACACA GGAGGCGC CTC GCGCCTCC TTTCAACAACGTTCA TERM 3189 3059712 - 3059730 + r 90 -16 -3.54459 | opp_overlap 3059712 3059710 3059708 AAGGCTCAAAACACA GGAGGCGC CTC GCGCCTCC TTTCAACAACGTTCA Bphy_2706 3060486 - 3059761 - | putative thiol-disulfide interchange protein, DsbC Bphy_2707 3061822 - 3060650 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 3190 3061835 - 3061881 + H 71 -12.8 -2.69647 | opp_overlap 3061835, overlap 3061844 CATCCGGGCATTATA GCCGCGAGGGGTGGCGGGGACG GAT CGGCTCCGCCGTCTTTCGGGGG TAGTCTGGCTTTGTT TERM 3191 3061844 - 3061872 + H 77 -12.3 -3.5627 | opp_overlap 3061835, overlap 3061835 ATTATAGCCGCGAGG GGTGGCGGGGACG GAT CGGCTCCGCCGTC TTTCGGGGGTAGTCT Bphy_2708 3062226 - 3063320 + | GTP-binding protein YchF TERM 3192 3063377 - 3063394 + F 100 -9.8 -5.81032 | opp_overlap 3063376 CGCACAGCACATCAG GCCGCG CTACGA CGCGGC TTTTTTTTCGCCTTC Bphy_2709 3063592 - 3064917 + | extracellular solute-binding protein Bphy_2710 3065017 - 3065901 + | binding-protein-dependent transport systems inner membrane component Bphy_2711 3065898 - 3066743 + | binding-protein-dependent transport systems inner membrane component TERM 3193 3067430 - 3067454 + G 81 -12.1 -3.89346 | CGAAGTTTATGAGCG GCCTGCGACGA CGT TCGTGGCGGGC TTTATCGGCTCACCG TERM 3194 3067792 - 3067804 + G 73 -9.1 -3.93262 | TGCTGTCGGCCGCCT TGCCG GTG CGGCA TTTGCATTTCTTCGA Bphy_2712 3066756 - 3067847 + | ABC transporter related TERM 3195 3067948 - 3067933 - f 74 -8.2 -4.18018 | overlap 3067934 GGGCCGCAGGCAAAA CCGGCG ACTG CGCCGA GACAAAAAGCGAGAA Bphy_2713 3068066 - 3069733 + | ABC transporter related Bphy_2714 3069956 - 3071098 + | hypothetical protein Bphy_2715 3071751 - 3071128 - | HAD family hydrolase Bphy_2716 3072299 - 3071748 - | isochorismatase hydrolase TERM 3196 3072117 - 3072142 + g 80 -15.5 -2.82516 | gap 1, opp_overlap 3072087 CCACGGGTCGCTGCC GCG-TGCGAGCG GTC CGCTCGCACCGC TCTCGTGCTGCACGA TERM 3197 3072393 - 3072341 - R 71 -10.5 -3.53012 | gap 2, opp_overlap 3072344 3072352 3072379, overlap 3072342 TCTTCCTGCCGCAAA GCTGGCAGCATCGAGCGAGCCGCCG TTTCG CGGCGGCTCG-TCAGCGCGGCCT-C ATACCGGCTGCGTAC Bphy_2717 3074206 - 3072392 - | peptidase M24 TERM 3198 3072876 - 3072850 - G 70 -14.4 -2.52896 | overlap 3072835 GCATCGGCGAACGGA TGCCGCGCGGGA ACT TCGCGCGCGACA GCGCCATCGTGCCCT TERM 3199 3073118 - 3073141 + g 74 -2.4 -4.75372 | gap 1, opp_overlap 3073112, overlap 3073115 CGTAACGAAGCCCGC CTGGC-GCG CACGCGC CGCCGTCAG TTTTTCGTCGATGGT TERM 3200 3074032 - 3074004 - G 77 -12.4 -3.60074 | overlap 3073996 3073995 CACAAACCGGCGAAA TCGGCCGTCACG ACCAG CGTGCCGACCGA GCCGGTGAAGCCGGA Bphy_2718 3074480 - 3074226 - | hypothetical protein Bphy_2719 3074668 - 3075414 + | two component transcriptional regulator TERM 3201 3076620 - 3076582 - g 74 -14.5 -2.53747 | gap 1, overlap 3076571 3076581 3076579 CAAGGCGCAGAAGAT GC-TCGCGCGCGGCGACG ATCC CGCCGCCGTGCTCGAAGC GCTGTCGCAGGCGCT Bphy_2720 3075470 - 3076759 + | glutamyl-tRNA reductase TERM 3202 3076919 - 3076899 - g 75 -6.8 -4.4078 | overlap 3076915 CCGCCCCAATGAAAA CGAGCATG CAAGC CAAGCTCG ACCAGCTAACCACAC Bphy_2721 3076892 - 3077974 + | peptide chain release factor 1 TERM 3203 3078166 - 3078205 + G 71 -10.6 -3.63694 | gap 1, opp_overlap 3078157, overlap 3078167 3078202 GGAAACGCGGCGCGC GGCGGGCGAGCCGGTC-GC GCA GCTGATCGGCTCGCGCGAA TTCTTCGGACTCGAT TERM 3204 3078167 - 3078204 + G 71 -14.1 -2.77895 | gap 1, opp_overlap 3078157, overlap 3078166 3078202 GAAACGCGGCGCGCG GCGGGCGAGCCGGTC-GC GCA GCTGATCGGCTCGCGCGA ATTCTTCGGACTCGA TERM 3205 3078678 - 3078632 - g 78 -14.3 -3.18264 | opp_overlap 3078660 GCGCTCACCGACGAA GCCGACGGCCTGTCGGCGATC CGCGC GATCGTCGCCAGCGCGCCGGC GCGGCTCGTGCCGAA Bphy_2722 3077984 - 3078835 + | protein-(glutamine-N5) methyltransferase, release factor-specific Bphy_2723 3078948 - 3079259 + | glutaredoxin-like protein TERM 3206 3079346 - 3079313 - g 75 -7.6 -4.25104 | gap 3, overlap 3079294 3079291 CGCCCGTCAGGAAAA CGCACGCCGGCTGATCG TCG CGATCA-C-GG-GTGCG ACAGGCGCCATCTAC TERM 3207 3079799 - 3079830 + G 70 -2.2 -4.62783 | gap 1, opp_overlap 3079789, overlap 3079813 GACGATCGACCAGAT GGTCGACCATAC-CG TCG CGCGCGTGCTCGATC TTTTTGCGCTGGGTC Bphy_2724 3079284 - 3079892 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Bphy_2725 3080015 - 3080800 + | extradiol ring-cleavage dioxygenase class III protein subunit B TERM 3208 3080858 - 3080837 - T 100 -17.3 -4.98531 | opp_overlap 3080837 CGCGCAAACTAAAAA GCCCGCCAG AATT CTGGCGGGC TTCTTCTTGTGTCAG TERM 3209 3080837 - 3080858 + T 100 -17.3 -4.06864 | opp_overlap 3080837 CGCGCAAACTAAAAA GCCCGCCAG AATT CTGGCGGGC TTCTTCTTGTGTCAG Bphy_2726 3082484 - 3080892 - | amino acid permease-associated region TERM 3210 3081486 - 3081513 + g 84 -14.2 -3.65522 | GCCGTACAGCGGATG CACGCTGCCGAA GATC TTCGGCATCGTG TTGTTGCGCTCCATC Bphy_2727 3082948 - 3083151 + | cold-shock DNA-binding domain-containing protein TERM 3211 3083173 - 3083201 + T 100 -12.6 -4.60041 | gap 1, opp_overlap 3083179, overlap 3083179 CTTTCTTCCGGAACG C-AAAAACCCCGC CTCG GCGGGGTTTTTTG TTTTTCGGCCTCAAT TERM 3212 3083194 - 3083179 - T 100 -11.8 -4.74103 | opp_overlap 3083179 3083173 TCCGGAACGCAAAAA CCCCGC CTCG GCGGGG TTTTTTGTTTTTCGG TERM 3213 3083179 - 3083194 + T 100 -11.8 -5.93252 | opp_overlap 3083179, overlap 3083173 TCCGGAACGCAAAAA CCCCGC CTCG GCGGGG TTTTTTGTTTTTCGG Bphy_2728 3084513 - 3083245 - | putative chaperone TERM 3214 3083407 - 3083432 + g 91 -16.9 -3.53091 | opp_overlap 3083391, overlap 3083421 TGCATCGACCTCACG CGGTGCGACGC CCGC GCGTTGCACCG TTTCGCGCGCGGCCT TERM 3215 3084155 - 3084121 - G 80 -5.4 -4.72272 | opp_overlap 3084151 GTCGTCGACGAAAAA CACCGGGCGACCGAGC ACC GCGCGGCTGATCGGCG TGCCTGCCGTCTGCT TERM 3216 3084337 - 3084358 + g 70 -5.8 -4.30809 | gap 1, overlap 3084337 ATACGCTTCGAGCGC CGCGCG-GC CATAT GCGCGCGTG TTTTCGTCGGTGTTG TERM 3217 3085494 - 3085454 - g 88 -9.8 -4.64676 | gap 2, overlap 3085480 GCACGGCGAAGAAAA GGAAGCGCGCC-GGAT-CGT CGA AGGTATCGAGGCGCGCTTCC GCGCGCAAGACCACG Bphy_2729 3084759 - 3086228 + | major facilitator transporter TERM 3218 3086267 - 3086252 - T 100 -11.8 -5.74122 | opp_overlap 3086250 CACCACACAAAAAAA CGGCCC AGAT GGGCCG CGTTGCGTCGTCCTG Bphy_2730 3086921 - 3086304 - | nitroreductase TERM 3219 3086595 - 3086547 - G 70 -11 -3.36273 | gap 2, opp_overlap 3086555, overlap 3086543 TGCCTGCAACACCAA CGACAGC-GCCGCTGCGC-CCGCA TCG TACGGCGCGCAGCGGTTGATCTCG CCCTTCGGCGTCAGC TERM 3220 3086555 - 3086586 + g 89 -16.6 -3.26947 | gap 1, opp_overlap 3086543 3086547 ACACCAACGACAGCG CCGCTGCGC-CCGCA TCG TACGGCGCGCAGCGG TTGATCTCGCCCTTC TERM 3221 3087066 - 3087011 - R 77 -12.3 -3.6292 | overlap 3087004 3087019 3087021 3087024 ATAAATATCGCGAAA GCGCATAAGAGGAGCGCGTCGCGGC ATCTCA GCCGCGACGCGCTTCACGGTCGAGC CGATTACGACGTCAC TERM 3222 3087058 - 3087019 - R 100 -20.7 -3.39668 | overlap 3087011 3087021 3087024 CGCGAAAGCGCATAA GAGGAGCGCGTCGCGGC ATCTCA GCCGCGACGCGCTTCAC GGTCGAGCCGATTAC TERM 3223 3087056 - 3087021 - R 100 -21.9 -3.2665 | overlap 3087019 3087011 3087024 CGAAAGCGCATAAGA GGAGCGCGTCGCGGC ATCTCA GCCGCGACGCGCTTC ACGGTCGAGCCGATT TERM 3224 3087053 - 3087024 - R 100 -22.2 -2.80817 | overlap 3087021 3087019 3087011 AAGCGCATAAGAGGA GCGCGTCGCGGC ATCTCA GCCGCGACGCGC TTCACGGTCGAGCCG Bphy_2731 3088361 - 3087078 - | major facilitator transporter TERM 3225 3087828 - 3087792 - G 70 -7.9 -3.9461 | gap 1 CTCGGGCAACAAGAA CGCGACGAGCGGCAGC ACGACG GCGGCCGCG-ATCGCG ACCGTCCACACGACT TERM 3226 3088581 - 3088627 + G 70 -5 -4.36914 | opp_overlap 3088556 3088555 3088582, overlap 3088582 3088582 CCGCCGTGCGCAGAC AG-CGGGCTCCGACGCGCAGCA ACATC TTCTGCGCG-CGGCGGCCGACC TTTTCTACAAGGAAG TERM 3227 3088972 - 3088962 - g 75 -6.8 -4.39954 | GAACAACAAGACAAA GCTG ATG CAGC GTCTGAACGAACTCT Bphy_2732 3088495 - 3089163 + | TetR family transcriptional regulator TERM 3228 3089524 - 3089499 - g 74 -10.5 -3.69434 | gap 1 GGAACGAATGCTAAA GCAGATGCGCCT GGA AGGCACA-CTGC AAATCGCGAGCTTCC Bphy_2733 3089191 - 3089760 + | hypothetical protein Bphy_2734 3090613 - 3089783 - | hypothetical protein Bphy_2735 3091004 - 3091324 + | hypothetical protein TERM 3229 3091359 - 3091333 - T 71 -12.2 -2.91264 | opp_overlap 3091330 GGGCTGATCCACAGA CGGCGGCGCG GCGCGCT CGCGCAGCCG ACATCTTGCGCCGTT Bphy_2736 3091745 - 3091533 - | hypothetical protein TERM 3230 3092159 - 3092214 + G 84 -11.9 -3.96327 | gap 3 CCGCCGAAGCGCTGG CTCGCGGC-GGCGTGC-GCGTCGACGTC TAC GACG-CGATGCCGTCCGTCGGCCGCAAG TTTCTGATGGCGGGT Bphy_2737 3092068 - 3093336 + | hypothetical protein Bphy_2738 3094522 - 3093353 - | methyltransferase small TERM 3231 3094494 - 3094548 + g 93 -17.8 -3.67498 | overlap 3094496 3094502 AGTGCGGTGTGTGGG TGCGAGAGGCGAGGCGTGGCCGCATG CAT CGCGCGGACTCGCTTCGCTTTTCGTA TTGTATTGAACGTTC TERM 3232 3094496 - 3094546 + g 93 -18.2 -3.41292 | overlap 3094494 3094502 TGCGGTGTGTGGGTG CGAGAGGCGAGGCGTGGCCGCATG CAT CGCGCGGACTCGCTTCGCTTTTCG TATTGTATTGAACGT TERM 3233 3094502 - 3094540 + g 100 -14.4 -4.49167 | overlap 3094496 3094494 GTGTGGGTGCGAGAG GCGAGGCGTGGCCGCATG CAT CGCGCGGACTCGCTTCGC TTTTCGTATTGTATT TERM 3234 3094651 - 3094626 - R 100 -21.9 -4.54727 | opp_overlap 3094626 CGCCGCAAAGCAAAA CGGGCCACGCG TTAC CGCGTGGCCCG TTTCTTGACGCTGGT TERM 3235 3094626 - 3094651 + r 100 -21.9 -4.1711 | opp_overlap 3094626 CGCCGCAAAGCAAAA CGGGCCACGCG TTAC CGCGTGGCCCG TTTCTTGACGCTGGT Bphy_2739 3095237 - 3094758 - | stringent starvation protein B Bphy_2740 3095924 - 3095313 - | glutathione S-transferase domain-containing protein TERM 3236 3095387 - 3095375 - G 71 -7.7 -4.09685 | opp_overlap 3095374 CCGGACGGCTGAAAA TACGC TCG GCGTA CTTCATCAGCGGCGC TERM 3237 3096001 - 3095951 - R 86 -11.9 -4.05875 | gap 1, opp_overlap 3095952 3095963 CTCAAAAAACTTAAA GGGCCAGCG-AGCGGGAAAACC GTCATGCA GGTCTTCCCTTTGCGCCGGCCC CACACCAGTTACGGC Bphy_2741 3096776 - 3096021 - | cytochrome c1 TERM 3238 3096311 - 3096327 + g 71 -8 -4.07885 | opp_overlap 3096311 GAAGCTGCCACAGCA CGTGAG GCATG CTCACG TTTTCGAACACCATA Bphy_2742 3098182 - 3096800 - | cytochrome b/b6 domain-containing protein Bphy_2743 3098799 - 3098182 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit Bphy_2744 3099765 - 3099019 - | hypothetical protein TERM 3239 3099271 - 3099233 - G 70 -13.9 -2.60496 | opp_overlap 3099234, overlap 3099232 3099230 GCCGCCTCGAAATAG CCTTGCGCGGCGCC-CGTG CAC CACGCGACGCGGCGCA-GG TTCTTGTCGGGATCG TERM 3240 3099234 - 3099271 + g 86 -14.1 -3.79906 | gap 1, opp_overlap 3099233 3099232 3099230 CCGCCTCGAAATAGC CTTGCGCGGCG-CCCGTG CAC CACGCGACGCGGCGCAGG TTCTTGTCGGGATCG Bphy_2745 3099785 - 3100996 + | 2-alkenal reductase TERM 3241 3101025 - 3101071 + T 88 -16.9 -2.87564 | opp_overlap 3101030 3101035, overlap 3101030 3101036 GTTCAGGCCGCGCAC GCAAACAAAATGGGCAGT-CTCC AAC GGAGCACTGCCCTTTTTGTT-GC TGTCTGACCGCATGC TERM 3242 3101030 - 3101067 + T 90 -16.5 -3.32022 | gap 1, opp_overlap 3101030 3101035, overlap 3101025 3101036 GGCCGCGCACGCAAA CAAAATGGGCAGT-CTCC AAC GGAGCACTGCCCTTTTTG TTGCTGTCTGACCGC TERM 3243 3101067 - 3101030 - T 100 -16.5 -3.64703 | gap 1, opp_overlap 3101030 3101025 3101036, overlap 3101035 GGCCGCGCACGCAAA CAAAATGGGCAGT-CTCC AAC GGAGCACTGCCCTTTTTG TTGCTGTCTGACCGC TERM 3244 3101062 - 3101035 - T 100 -10.6 -4.90778 | gap 1, opp_overlap 3101030 3101025 3101036, overlap 3101030 CGCACGCAAACAAAA TGGGCAGT-CTCC AAC GGAGCACTGCCCT TTTTGTTGCTGTCTG TERM 3245 3101036 - 3101061 + T 100 -14.1 -5.17744 | gap 1, opp_overlap 3101035 3101030, overlap 3101030 3101025 GCACGCAAACAAAAT GGGCAGT-CTCC AAC GGAGCACTGCCC TTTTTGTTGCTGTCT Bphy_2746 3101902 - 3101123 - | Sec-independent protein translocase, TatC subunit Bphy_2747 3102493 - 3101945 - | twin-arginine translocation protein, TatB subunit TERM 3246 3102427 - 3102391 - G 79 -15 -3.01712 | overlap 3102371 GCGCGCGGCCGAACA GCGCGCCCGCCGTGCG GGCCA CGCGCGGCAAGCGCTC GGGCCCGAGCACGAC TERM 3247 3102540 - 3102576 + r 86 -8.7 -4.56914 | gap 1 AGCGCAGGCTCGGCT GGCGCCGGATTAGCGG GAATCG CCGG-AATGCGGCGCC TTTTCCTTTGCGTCG Bphy_2748 3102785 - 3102549 - | twin arginine-targeting protein translocase TERM 3248 3103029 - 3103019 - R 83 -8.2 -4.65895 | GTGCGTAGTCAAAAA GCCG ATG CGGC GAATCTATGTCGATT Bphy_2749 3103472 - 3103098 - | histidine triad (HIT) protein Bphy_2750 3103905 - 3103510 - | hypothetical protein TERM 3249 3104013 - 3104029 + r 85 -15.1 -3.07994 | opp_overlap 3104002 ACGAGCCTGCGCAGT GCGCGGC TTG GCCGCGC TTGCCTGAGCTTGCC Bphy_2751 3104422 - 3104048 - | phosphoribosyl-ATP diphosphatase TERM 3250 3104080 - 3104090 + g 70 -2.4 -4.63218 | CGCGCTCGCGGCTCT TGCG CAA CGCC TTTTCTTCGAGCCCC TERM 3251 3104212 - 3104243 + g 71 -14.4 -2.70932 | gap 1, opp_overlap 3104215 CGGCTGTTTCGCTAA CGAGCGCCTTG-CGC TCC GCGCCGAGGCGCACG TCCTTCGCGGCCAGC Bphy_2752 3104826 - 3104419 - | phosphoribosyl-AMP cyclohydrolase Bphy_2753 3105604 - 3104831 - | imidazoleglycerol phosphate synthase, cyclase subunit TERM 3252 3105042 - 3105001 - G 90 -16.7 -3.32914 | gap 1 AGGCAATCACAGGAA TCGACACCGCGTCCGACACG GCG CGCGTCAG-CGCGATGTCAA AGCCGCTCTTCGTGC Bphy_2754 3106513 - 3105761 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Bphy_2755 3107364 - 3106723 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Bphy_2756 3107981 - 3107361 - | multiple antibiotic resistance (MarC)-related protein Bphy_2757 3108629 - 3108042 - | imidazoleglycerol-phosphate dehydratase TERM 3253 3108341 - 3108307 - G 77 -4.9 -4.63527 | gap 1, overlap 3108308 GGACGACCGGAAAAA TCGATC-ACGACGCGC GACA GCGCCTCGTCGAGCGG CACGTAGGAATGACC Bphy_2758 3109753 - 3108683 - | histidinol-phosphate aminotransferase Bphy_2759 3111231 - 3109909 - | histidinol dehydrogenase TERM 3254 3110792 - 3110848 + g 72 -8.5 -4.07568 | gap 1, opp_overlap 3110824 ATCAGCACCGACGAC GGATACGCCGCCTTGCCGC-CTGGCA CATAAA TGCCCGCGCGGTCGAGCGGCGTCACC TTTTGCCCGAGCACC Bphy_2760 3111985 - 3111287 - | ATP phosphoribosyltransferase TERM 3255 3111733 - 3111758 + g 88 -17.5 -3.04461 | opp_overlap 3111747 3111748 TCAGCACGTCCTTGC CGGCGACGCCG AAAT CGGCGGCGCCG TATTCGACGTACGTG TERM 3256 3111868 - 3111897 + g 74 -10 -3.73224 | gap 1 GGTCTTCCGTCACTT CGATGCCGGCTGC GGCGA GCAGC-GGCACCG TTTCCTCGAAAATGC Bphy_2761 3113244 - 3111982 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 3257 3113297 - 3113324 + r 86 -14.1 -3.26989 | overlap 3113293 GTCTTGTGGGCGGTT GCTGCGGCGCC ATGCGC GGCGTCGCGGC TCTCTTGTGTGTCTT Bphy_2762 3113723 - 3113484 - | BolA family protein Bphy_2763 3114489 - 3113734 - | ABC-2 type transporter TERM 3258 3114071 - 3114051 - G 71 -12.5 -3.29144 | opp_overlap 3114044 CGAGCGTGCCGAGAA TCGCCGAGC CCA GCACGGCGA ACGCGATGATGTAGA Bphy_2764 3115412 - 3114486 - | ABC transporter related TERM 3259 3115009 - 3115037 + g 72 -3 -4.66609 | gap 1, overlap 3115010 CGGCGCTTCATCCCG CCCGACAGCGCGC GCAT GTTCGC-GTCGGC TTTTTCGGTGAGATC TERM 3260 3115358 - 3115380 + g 70 -2.7 -4.66833 | gap 1 AGCTGACGCCTTTAA GCGCCTGCAG ATCC TTGTAG-CGC TTTTTGACGTTACGA Bphy_2765 3116006 - 3115701 - | hypothetical protein Bphy_2766 3116632 - 3116003 - | toluene tolerance family protein Bphy_2767 3117719 - 3116772 - | VacJ family lipoprotein TERM 3261 3117782 - 3117756 - R 71 -10 -3.61178 | opp_overlap 3117779 3117780 CGGATGCACCCGAAA CGGCCGCAGCAG GCG CTGCGGGAGCCG GTGCTGCAGGCTCGG Bphy_2768 3118287 - 3117733 - | hypothetical protein Bphy_2769 3119133 - 3118366 - | hypothetical protein TERM 3262 3119067 - 3119047 - G 93 -3.9 -5.23316 | overlap 3119039 CAGCAGAGGAAAAAA TTCCAGCAC GAG GCGCAAGAA CATGCGCGCCGCATA Bphy_2770 3119951 - 3119130 - | ABC transporter related Bphy_2771 3121156 - 3120029 - | thiamine-phosphate diphosphorylase Bphy_2772 3121977 - 3121153 - | thiazole biosynthesis family protein Bphy_2773 3122217 - 3122020 - | thiamine biosynthesis protein ThiS TERM 3263 3122159 - 3122105 - G 71 -9.1 -3.72576 | overlap 3122106 GCGCGCGCGACGAAA TTGCCGTTCAGCGCG-ACGGCGAACGG CGG CCGCGCGCCGAACGCGCTGAGC-GCGT CGGCGACGGTCGCGC Bphy_2774 3123388 - 3122228 - | FAD dependent oxidoreductase TERM 3264 3122349 - 3122331 - G 79 -10.2 -4.09685 | CGCCAGTCGGCAAAA GCGTCGGC ATC GGCGACGC GGCCATCGAGCAGCG TERM 3265 3123033 - 3123081 + g 100 -21 -2.78384 | opp_overlap 3123061 AGCAGGTCGGCAGGC GCGTTCGCGCGCAAGCGTCGCT CGAAC AGCGGCGCTTCGGCGCGATCGC TGTGATGCCAGACGA TERM 3266 3123563 - 3123543 - H 93 -13.9 -3.84961 | TACCCAAGGACGAAA CCGGCGGGC AAG GCCGGCCGG GCATGGGCGCTCACG TERM 3267 3124705 - 3124720 + G 77 -5.4 -4.68593 | overlap 3124706 ACCAGCAGCAGCGCG TGGAAG CCGA CTTCCG TTTTTCGCTGATCCG Bphy_2775 3124044 - 3125777 + | ABC transporter Bphy_2776 3126139 - 3126633 + | hypothetical protein TERM 3268 3126634 - 3126655 + F 78 -6.6 -4.57073 | gap 1 CGCATCGCGCGCTAA GCGTACGTC CTCCA GACG-ACGC TTTTTCGACAACCTG Bphy_2777 3126721 - 3127266 + | hypothetical protein TERM 3269 3128068 - 3128056 - g 76 -9.1 -4.08216 | GCAGCTCCTCGAAAA GCTGC ACG GCAGC ACCGATACGCATCGC Bphy_2778 3127502 - 3128248 + | two component transcriptional regulator Bphy_2779 3128994 - 3128308 - | flagellar L-ring protein TERM 3270 3128658 - 3128693 + g 74 -14.6 -2.64616 | opp_overlap 3128643 3128641, overlap 3128647 3128660 GCCGCGCCAGACGCG CTGCCGTGCCCGTCGA TTTG TCGGCGGCCTCGGCGG TGATGTCGCTCGCAC Bphy_2780 3129773 - 3129048 - | hypothetical protein Bphy_2781 3130013 - 3129804 - | putative lipoprotein TERM 3271 3129949 - 3129919 - G 75 -11.9 -3.46602 | gap 1, overlap 3129890 GCCGCGACAGCACAA CCGTCGA-GCGGCA GCAC TGCCGCGCCAACGG CGGACCACATCGCGA TERM 3272 3130025 - 3129999 - G 72 -3 -4.65895 | gap 1 CGCGCGACTGAAAAA GCGTGATTTCG GCACAG CGAACTC-CGC CAACTCAGGCCGTCG Bphy_2782 3130218 - 3130030 - | hypothetical protein TERM 3273 3130966 - 3130927 - g 80 -12.2 -3.75169 | gap 1 GACTATCTGACGAAA CCAT-TCGATCCGCGCGAG CTG CTCGCGCGCATCCAGACGG TGCTCCGCCGGCGCG Bphy_2783 3130618 - 3131355 + | two component transcriptional regulator Bphy_2784 3131363 - 3132676 + | integral membrane sensor signal transduction histidine kinase TERM 3274 3132793 - 3132824 + T 100 -13 -5.1861 | gap 1 CGGCGCCTCCCTGTT CGGTCCGTCCC-GCT GCC ACCTGGGACGGGCCG TTTTTTCCTGGTGCG Bphy_2785 3133812 - 3132847 - | protein tyrosine/serine phosphatase TERM 3275 3133885 - 3133867 - R 76 -12.4 -3.42395 | overlap 3133865 3133868 CGCAGGAGCGAAAGA CGCACGCG ATG CGCGTGCA CGTGGATGGCCTCGC TERM 3276 3133884 - 3133868 - R 74 -13.7 -2.65116 | overlap 3133867 3133865 GCAGGAGCGAAAGAC GCACGCG ATG CGCGTGC ACGTGGATGGCCTCG Bphy_2786 3134756 - 3134112 - | 2'-5' RNA ligase TERM 3277 3134819 - 3134843 + r 100 -13.6 -5.07053 | gap 1, opp_overlap 3134819 CATGCCAGAAAAAAA CCGGGTCGCTC TTGC GAGCG-CCCGG TTTTTTGACCTGCTT TERM 3278 3134843 - 3134819 - R 100 -13.6 -5.626 | gap 1, opp_overlap 3134819 CATGCCAGAAAAAAA CCGGGTCGCTC TTGC GAGCG-CCCGG TTTTTTGACCTGCTT TERM 3279 3134969 - 3134932 - R 74 -13.4 -2.52623 | gap 2, overlap 3134931 3134929 CCTCCTGCAGAACAG GGCGGCTTGCCGCGCAAC ACAT GCAGCGCGGC--GCCGCC GGGACGATCGAGACT Bphy_2787 3136501 - 3134984 - | glutamate synthase, NADH/NADPH, small subunit TERM 3280 3136488 - 3136530 + g 81 -14.2 -3.51076 | overlap 3136482 3136488 ATCGGTGAGGGGATC G-GCGCCCGCCGCATCGCGT TGTGC ACGCAA-GCGGCGGGTGCGC TTCGTTATGTCGTCA TERM 3281 3136488 - 3136529 + g 71 -14.4 -2.70164 | gap 1, overlap 3136488 3136482 ATCGGTGAGGGGATC GGCGCCCGCCGCATCGCGT TGTGC ACGCAA-GCGGCGGGTGCG CTTCGTTATGTCGTC Bphy_2788 3141268 - 3136565 - | glutamate synthase (ferredoxin) TERM 3282 3137052 - 3137025 - G 79 -11.2 -3.92869 | overlap 3137051 TTACGCACGCAGAAA CGCTCGCCCGCG ACGC CGCGGAAGAACG ACTCGCCTTCGATCG TERM 3283 3140569 - 3140546 - G 78 -13.8 -3.28712 | opp_overlap 3140531 CGTGTTGGTCGAGAA GCGCTGGTGC ACGA GCGCCAGCGC CGACACGACGCGCTC TERM 3284 3141548 - 3141521 - R 76 -7.1 -4.44915 | opp_overlap 3141521 3141526, overlap 3141526 CAATTACCGACAAAA CAAAACGGCAT GCAGGG ATGCCGTTTTC TTTTGGATGCAGCCA TERM 3285 3141521 - 3141548 + r 71 -7.1 -4.18018 | opp_overlap 3141521 3141526, overlap 3141526 CAATTACCGACAAAA CAAAACGGCAT GCAGGG ATGCCGTTTTC TTTTGGATGCAGCCA TERM 3286 3141543 - 3141526 - R 91 -7 -5.19275 | opp_overlap 3141521 3141526, overlap 3141521 ACCGACAAAACAAAA CGGCAT GCAGGG ATGCCG TTTTCTTTTGGATGC TERM 3287 3141526 - 3141543 + r 90 -7 -5.10933 | opp_overlap 3141526 3141521, overlap 3141521 ACCGACAAAACAAAA CGGCAT GCAGGG ATGCCG TTTTCTTTTGGATGC Bphy_2789 3142295 - 3141588 - | hypothetical protein Bphy_2790 3142482 - 3143204 + | OmpW family protein Bphy_2791 3143554 - 3143937 + | protein of unknown function DUF883 ElaB TERM 3288 3144046 - 3144012 - T 70 -12.3 -2.71144 | gap 2, opp_overlap 3144003 3144001 3144018 3144038, overlap 3144018 GATCGCTGCGAAGGA CGGAAAGCGGCGCATGC TTT GCA--CGCCGCTTTCCA CTTCGCGCTTTGCAT Bphy_2792 3145316 - 3144099 - | deoxyguanosinetriphosphate triphosphohydrolase Bphy_2793 3146461 - 3145370 - | 3-dehydroquinate synthase Bphy_2794 3147020 - 3146469 - | shikimate kinase TERM 3289 3146636 - 3146655 + g 84 -7 -4.82901 | GCCCTTTCGGGTCTT CCGTCTGC AGAA GCGGCCGG TTTTTGTCGCGGCGC TERM 3290 3146874 - 3146891 + g 77 -12.7 -3.31415 | overlap 3146869 GAAGATCACCGGGAT GCGCGCA CCCG TGCGCGC TTCGATTTCATGGTC TERM 3291 3147130 - 3147142 + r 71 -10.5 -3.54459 | overlap 3147140 TGGTGCTTTCGGCCC GCGCC CGT GGCGC TTTGCCGGCGATTGG Bphy_2795 3148729 - 3147158 - | type IV pilus secretin PilQ Bphy_2796 3149640 - 3148726 - | hypothetical protein Bphy_2797 3150269 - 3149637 - | fimbrial assembly family protein Bphy_2798 3151225 - 3150266 - | hypothetical protein TERM 3292 3151985 - 3151947 - g 71 -9.6 -3.69216 | overlap 3151945 3151948 TCTCCAGCGAAAAGA CGTACACGCGCAAGATCT ACG AGATGCTGCTCGCGTACA AGATCGAATCGAAGT TERM 3293 3153626 - 3153603 - g 81 -10.9 -3.9941 | TCGGCGACAAGGAAA CGGGCGGCG GGCTCG CGCTGCCCG TGTGGATCGAGTACA Bphy_2799 3151478 - 3153868 + | 1A family penicillin-binding protein TERM 3294 3153916 - 3153892 - T 100 -21.5 -5.40072 | opp_overlap 3153892 GCTCCCTGAAAAAAA GCCGCCGCGTA TTG TACGCGGCGGC TTTTTACTTTCCGCG TERM 3295 3153892 - 3153916 + T 100 -21.5 -4.98531 | opp_overlap 3153892 GCTCCCTGAAAAAAA GCCGCCGCGTA TTG TACGCGGCGGC TTTTTACTTTCCGCG Bphy_2800 3154285 - 3153968 - | iron donor protein CyaY Bphy_2801 3154321 - 3154629 + | putative lipoprotein TERM 3296 3154985 - 3154964 - g 71 -13 -3.01712 | overlap 3154976 3154977 CCGGTGTGGGCAAGA GCGTCGCG GAAATG CGCGACGC GCTCGCGGCAGGCGT Bphy_2802 3154639 - 3155901 + | diaminopimelate decarboxylase TERM 3297 3155933 - 3155957 + T 100 -12.9 -5.29846 | opp_overlap 3155933 CGCTCACAGTCAAAA GGCGATGCG CTCATCA CGCATCGCC TTTTTGTTTCCGGTT TERM 3298 3155957 - 3155933 - T 95 -13.6 -4.2349 | opp_overlap 3155933 CGCTCACAGTCAAAA GGCGATGCGC TCATC ACGCATCGCC TTTTTGTTTCCGGTT Bphy_2803 3156700 - 3155987 - | ferric reductase domain-containing protein Bphy_2804 3157707 - 3156712 - | oxidoreductase molybdopterin binding TERM 3299 3156901 - 3156886 - G 77 -4.6 -4.63932 | CACGTTCGAATAAAA GCCGTA CTCG TTCGGC GCATAGGTGTTCCAG TERM 3300 3157875 - 3157826 - R 93 -17.3 -3.29511 | gap 1, opp_overlap 3157838 3157839, overlap 3157827 3157839 GTGATCCTTCCATAA CGGCGTAAAAAAACCGCCG-GTGC AGT GCACGCGGCGGCTTTTTCACGCTT CGAGGCATACAACTG TERM 3301 3157874 - 3157827 - R 100 -20.8 -2.57564 | gap 1, opp_overlap 3157838 3157839, overlap 3157826 3157839 TGATCCTTCCATAAC GGCGTAAAAAAACCGCCG-GTGC AGT GCACGCGGCGGCTTTTTCACGCT TCGAGGCATACAACT TERM 3302 3157838 - 3157863 + r 93 -11.1 -4.62471 | gap 1, opp_overlap 3157827 3157826 3157839, overlap 3157839 TAACGGCGTAAAAAA ACCGCCG-GTGC AGT GCACGCGGCGGC TTTTTCACGCTTCGA TERM 3303 3157862 - 3157839 - R 100 -14.6 -5.41746 | gap 1, opp_overlap 3157838 3157839, overlap 3157827 3157826 AACGGCGTAAAAAAA CCGCCG-GTGC AGT GCACGCGGCGG CTTTTTCACGCTTCG TERM 3304 3157839 - 3157862 + r 87 -14.6 -3.37 | gap 1, opp_overlap 3157839 3157827 3157826, overlap 3157838 AACGGCGTAAAAAAA CCGCCG-GTGC AGT GCACGCGGCGG CTTTTTCACGCTTCG Bphy_2805 3159108 - 3157891 - | cytochrome c-type biogenesis protein CcsB Bphy_2806 3161338 - 3159113 - | ResB family protein TERM 3305 3159773 - 3159783 + g 72 -8.2 -4.1711 | opp_overlap 3159763, overlap 3159772 GAAGAGCGTCAGCAC GCGC GCC GCGC TTTCTTCCAGATGCT TERM 3306 3161401 - 3161365 - R 80 -2.3 -5.27779 | gap 2, opp_overlap 3161358 3161365 3161378 CTGAACAGCAAAAAA GGGTGCAGGTTTATCGC TGTAT GCGATTC-CCT-CACCC TTTTCTTGTTTTCTC TERM 3307 3161365 - 3161401 + r 77 -2.3 -5.12916 | gap 2, opp_overlap 3161365, overlap 3161358 3161378 CTGAACAGCAAAAAA GGGTGCAGGTTTATCGC TGTAT GCGATTC-CCT-CACCC TTTTCTTGTTTTCTC Bphy_2807 3162119 - 3161466 - | cytochrome c class I Bphy_2808 3162386 - 3163048 + | GTP-binding protein HSR1-related TERM 3308 3163116 - 3163096 - f 100 -11.8 -5.60993 | TCGCCCAGAAAAAAA CCCGCCGC TATTG ACGGCGGG TTAAACAGCCTAATC Bphy_2809 3163275 - 3164273 + | porphobilinogen synthase TERM 3309 3164340 - 3164367 + T 72 -8.4 -3.84985 | gap 1, overlap 3164332 CGACAGTGACTGCAA GCGGAGG-GGTCG ACC TGACAGCCTCCGC TTCTCTCTTTTAATC Bphy_2810 3166292 - 3164436 - | protein-disulfide reductase TERM 3310 3165239 - 3165207 - G 71 -7.5 -4.18494 | overlap 3165209 GATGCCCATCGAAAA TAGGGCTACACCGCC TAG GACGGCGTTGCCCGT GTGCGCGATGAAGGC TERM 3311 3165237 - 3165209 - G 89 -14.5 -3.69216 | overlap 3165207 TGCCCATCGAAAATA GGGCTACACCGCC TAG GACGGCGTTGCCC GTGTGCGCGATGAAG TERM 3312 3165599 - 3165577 - G 76 -9.8 -4.1721 | AGTGACAGCGCAAAA CCGCGCGC CCGCGTC ACGCGCGG GCCTTCGCCAATGAT Bphy_2811 3166617 - 3166285 - | CutA1 divalent ion tolerance protein TERM 3313 3166726 - 3166743 + r 100 -8.4 -4.99435 | opp_overlap 3166726, overlap 3166720 GCTGAAAGCAAAAAA GCCAGG CTTTCA CCTGGC TTTTTAATTGTTGCC TERM 3314 3166743 - 3166726 - R 100 -9.1 -5.37593 | opp_overlap 3166726 3166720 GCTGAAAGCAAAAAA GCCAGGC TTTC ACCTGGC TTTTTAATTGTTGCC Bphy_2812 3167160 - 3166765 - | ribosomal protein L17 TERM 3315 3167282 - 3167243 - R 100 -15.3 -4.65895 | gap 1, opp_overlap 3167250, overlap 3167248 GCCGGTATTGAAAAA GGCAA-GACGCGGATTTT AAAGG AAAATCCGCGTCATTACC AGTTGCGGTACGACT TERM 3316 3167276 - 3167248 - R 89 -16.2 -3.46102 | opp_overlap 3167250, overlap 3167243 TATTGAAAAAGGCAA GACGCGGATTTT AAAGG AAAATCCGCGTC ATTACCAGTTGCGGT TERM 3317 3167250 - 3167274 + r 73 -13 -2.73542 | opp_overlap 3167248 3167243 TTGAAAAAGGCAAGA CGCGGATTTT AAAGG AAAATCCGCG TCATTACCAGTTGCG Bphy_2813 3168289 - 3167312 - | DNA-directed RNA polymerase, alpha subunit TERM 3318 3167836 - 3167857 + g 72 -3.6 -4.62872 | gap 1, overlap 3167837 CGTAACGACGCACGT TGCC-CGGC ACATA GCCGCGGCC TTTTTCGACCTTGAT TERM 3319 3168404 - 3168359 - R 90 -10.4 -4.68655 | gap 1, opp_overlap 3168359 CAACCTGAAAATAAA CAGCCGAGGCGCCCC-CTTGC CTAAC GCAATCAGGGAACCTCGGCCG TTAATCCGATTAGCG Bphy_2814 3169037 - 3168414 - | ribosomal protein S4 TERM 3320 3169172 - 3169129 - R 100 -18.2 -3.22388 | gap 1, opp_overlap 3169163 3169165, overlap 3169163 TAGTCAATTCATTAA CGCAAGCAGCCTGCTACCGCC TTT AGCGGCAACAGGC-GCATGCG GAGCAAGCGTCTTAG Bphy_2815 3169588 - 3169184 - | ribosomal protein S11 Bphy_2816 3169982 - 3169617 - | ribosomal protein S13 TERM 3321 3170018 - 3170003 - R 81 -3.2 -5.27335 | opp_overlap 3170017, overlap 3170017 TTCCTCAAACAAAAA GCGC AAACAAAA GCGC GGCGTTCAGCCTTGA Bphy_2817 3170140 - 3170024 - | ribosomal protein L36 Bphy_2818 3170379 - 3170161 - | translation initiation factor IF-1 Bphy_2819 3171734 - 3170388 - | preprotein translocase, SecY subunit Bphy_2820 3172215 - 3171781 - | ribosomal protein L15 Bphy_2821 3172428 - 3172246 - | ribosomal protein L30 Bphy_2822 3172957 - 3172439 - | ribosomal protein S5 Bphy_2823 3173337 - 3172972 - | ribosomal protein L18 Bphy_2824 3173880 - 3173350 - | ribosomal protein L6 Bphy_2825 3174295 - 3173900 - | ribosomal protein S8 Bphy_2826 3174615 - 3174310 - | ribosomal protein S14 Bphy_2827 3175162 - 3174623 - | ribosomal protein L5 Bphy_2828 3175484 - 3175176 - | ribosomal protein L24 Bphy_2829 3175862 - 3175494 - | ribosomal protein L14 Bphy_2830 3176020 - 3175880 - | hypothetical protein TERM 3322 3176108 - 3176070 - R 77 -11.9 -3.51934 | opp_overlap 3176077, overlap 3176041 3176068 3176071 3176075 GGGCTCCCACAAAGA GGGAAGACCGAGATTAT AACAA ATAATCTCGGTCTTGCA AGCGAAATCTACTGC TERM 3323 3176107 - 3176071 - R 83 -15.4 -2.70946 | opp_overlap 3176077, overlap 3176041 3176070 3176068 3176075 GGCTCCCACAAAGAG GGAAGACCGAGATTAT AACAA ATAATCTCGGTCTTGC AAGCGAAATCTACTG TERM 3324 3176103 - 3176075 - R 86 -14.8 -3.26719 | opp_overlap 3176077, overlap 3176071 3176070 3176068 CCCACAAAGAGGGAA GACCGAGATTAT AACAA ATAATCTCGGTC TTGCAAGCGAAATCT Bphy_2831 3176426 - 3176154 - | ribosomal protein S17 Bphy_2832 3176620 - 3176423 - | ribosomal protein L29 Bphy_2833 3177044 - 3176628 - | ribosomal protein L16 Bphy_2834 3177841 - 3177047 - | ribosomal protein S3 TERM 3325 3177161 - 3177173 + g 77 -4.7 -4.63486 | GCCCGGACGTGCGTT GCGGC GCG GACGC TTTTCTTCGGCGACT TERM 3326 3177679 - 3177695 + g 71 -9.3 -3.70751 | GACGCTCGATCACCA CGCGGCC GAC GGACGCG TTCTTCAGCTTCTTC Bphy_2835 3178182 - 3177853 - | ribosomal protein L22 Bphy_2836 3178470 - 3178195 - | ribosomal protein S19 Bphy_2837 3179308 - 3178481 - | ribosomal protein L2 Bphy_2838 3179625 - 3179311 - | ribosomal protein L25/L23 Bphy_2839 3180242 - 3179622 - | ribosomal protein L4/L1e Bphy_2840 3180901 - 3180242 - | ribosomal protein L3 TERM 3327 3180950 - 3180980 + r 80 -4.7 -5.0133 | gap 1, opp_overlap 3180944 3180950, overlap 3180952 3180972 3180978 GCTAATTTACAAAAT GCCG-CGCATTTCG AACG TGAAGTGCGACGAC TTTTTTGCGCAAATG TERM 3328 3180998 - 3181029 + r 100 -15.3 -4.37092 | opp_overlap 3181004, overlap 3180978 3180972 3181004 TTTTGCGCAAATGCG CGAAAAGCCTTGC ATTATA GCGAGGCTTTTCG TTTTCTGCAAGCAAT TERM 3329 3181004 - 3181023 + r 84 -7.1 -4.73108 | opp_overlap 3181004, overlap 3180978 3180972 3180998 GCAAATGCGCGAAAA GCCTTGC ATTATA GCGAGGC TTTTCGTTTTCTGCA Bphy_2841 3181400 - 3181089 - | ribosomal protein S10 TERM 3330 3181498 - 3181455 - R 72 -5.9 -4.46587 | gap 1, overlap 3181452 3181459 CTATGAATAAAAGAA CGTAGGTCTGGGCCGCTCGC GAGGG GCGAATG-CCCAGACCCGGG CACATACTGCTAGAT TERM 3331 3181494 - 3181459 - R 70 -11.9 -2.79659 | gap 1, overlap 3181455 3181452 GAATAAAAGAACGTA GGTCTGGGCCGCTCGC GAGGG GCGAATG-CCCAGACC CGGGCACATACTGCT Bphy_2842 3182717 - 3181527 - | translation elongation factor Tu Bphy_2843 3184868 - 3182766 - | translation elongation factor G TERM 3332 3183101 - 3183111 + g 75 -6.8 -4.42639 | opp_overlap 3183094 CCATCGAACCAGCCA TGCG GAA CGCA TTTTCGTTCGAGTCT TERM 3333 3184957 - 3184926 - R 100 -18.8 -4.1891 | gap 1, opp_overlap 3184924 3184923 3184955 3184956 GCGCCCTAACACAAA CGGGCGAG-GCGCTT TGT AAGCGCACCCGCCCG GAATTCTTTCCGCTT Bphy_2844 3185467 - 3184997 - | ribosomal protein S7 Bphy_2845 3186027 - 3185647 - | ribosomal protein S12 TERM 3334 3186057 - 3186091 + r 93 -9.4 -4.72386 | opp_overlap 3186048 3186054 3186057 3186077 3186078, overlap 3186077 ATTGAACAAAATCGA CGTGTTCGTTTCTG GGCAAAG CAAAAACGAACGCG TTTTTGACTGCTTTC Bphy_2846 3188106 - 3186259 - | ATP-dependent DNA helicase RecQ TERM 3335 3188241 - 3188262 + r 85 -11.5 -4.07568 | opp_overlap 3188227 3188241 ACAGGCGAAAAAAAA CCGCCCGGT CGAA ACCAGGCGG TTTTGCCAACCGAGA TERM 3336 3188262 - 3188241 - R 100 -13.7 -5.79526 | opp_overlap 3188241, overlap 3188227 ACAGGCGAAAAAAAA CCGCCCGGT CGAA ACCAGGCGG TTTTGCCAACCGAGA TERM 3337 3188306 - 3188279 - R 73 -11.2 -3.41878 | opp_overlap 3188279 3188286 3188294 TTTGCCAACCGAGAA CGAGATAGCGGC TTGC GCCGCCAGCCCG CTTACTCGTTGGTAT Bphy_2847 3192549 - 3188308 - | DNA-directed RNA polymerase, beta' subunit Bphy_2848 3196677 - 3192571 - | DNA-directed RNA polymerase, beta subunit TERM 3338 3193867 - 3193915 + g 71 -13.9 -2.73483 | gap 1, overlap 3193869 3193904 3193905 ACGCGTGAACACCTG CACGTCGATGACCGTGCCGCTC ATGCCC GA-CGGCACGCGCAGCGACGTG TCCTTCACGTCCGAT TERM 3339 3193949 - 3193960 + g 70 -2.2 -4.63932 | gap 1, overlap 3193933 TTCTCGCCGAAAATC GC-GC GCA GCAGC TTTTCTTCCGGCGTC TERM 3340 3196895 - 3196865 - R 72 -9.8 -3.74693 | opp_overlap 3196890, overlap 3196866 3196890 3196892 CGCTACCCGACCAAA CTTGCCTTCTGCAG TCG CTTCAGAAGACAAA GAGAAACGCCAGTCG TERM 3341 3196926 - 3196902 - R 72 -5.6 -4.45693 | opp_overlap 3196890 3196914, overlap 3196892 3196890 GAAGACAAAGAGAAA CGCCAGTCGA ACTTG CCGAACGGCG ATTTTCTTTGGCTTC TERM 3342 3196914 - 3196927 + r 80 -4.5 -4.94962 | opp_overlap 3196902 3196892 3196890, overlap 3196890 AAACGCCAGTCGAAC TTGCC GAAC GGCGA TTTTCTTTGGCTTCT TERM 3343 3197027 - 3197002 - R 100 -14 -5.06735 | CACAAAGCACAAAAA GGCCGGCGGT GTGAAA ACCGCCAGCC TTCGCACAGCGCGCT Bphy_2849 3197425 - 3197048 - | ribosomal protein L7/L12 Bphy_2850 3197998 - 3197501 - | ribosomal protein L10 TERM 3344 3198250 - 3198217 - R 71 -12.5 -2.57211 | overlap 3198203 3198216 ACGGTCTTTGACAAC CGGTCGCTCGATT CGGACTGC AATCGTGCGACCG CCCAAAGCCCTTAAA Bphy_2851 3199000 - 3198302 - | ribosomal protein L1 Bphy_2852 3199432 - 3199001 - | ribosomal protein L11 TERM 3345 3199572 - 3199544 - R 81 -13.2 -3.60971 | gap 1, overlap 3199546 ACCGTAAGCGCGAAA GACGAATCGCGCC GTCT GGCGCGATCCG-C AAAAACCCAATTTAA TERM 3346 3199571 - 3199546 - R 90 -16.9 -3.38314 | overlap 3199544 CGTAAGCGCGAAAGA CGAATCGCGCC GTCT GGCGCGATCCG CAAAAACCCAATTTA Bphy_2853 3200141 - 3199584 - | NusG antitermination factor Bphy_2854 3200523 - 3200143 - | preprotein translocase, SecE subunit TERM 3347 3200672 - 3200641 - R 77 -13.8 -2.92171 | opp_overlap 3200638, overlap 3200638 TATACCCCTAAACCA TTTTGGGATTGGCG GCAT CGCCAACCCCGAAA CCACTTAGTCGATCA Bphy_2855 3201895 - 3200705 - | translation elongation factor Tu TERM 3348 3201903 - 3201913 + r 75 -5.4 -4.68424 | TTGGCCATTTTCGAC TCCT AAG AGGA TTTTTCCGTACGTTG TERM 3349 3202393 - 3202358 - R 100 -16.2 -4.10612 | opp_overlap 3202364 AGTGATAACTATAAA CGCCAAGACCCCGC TTTTGAGG GCGGGGTCTTGGTG ATGGGTAAGGAGCCT TERM 3350 3202364 - 3202387 + r 75 -12.4 -3.22298 | opp_overlap 3202358 AACTATAAACGCCAA GACCCCGCTT TTGA GGGCGGGGTC TTGGTGATGGGTAAG TERM 3351 3205044 - 3205055 + r 71 -7.2 -4.2354 | AGGATCTGTTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC Bphy_2856 3209485 - 3208127 - | GDSL family lipase TERM 3352 3209367 - 3209353 - G 75 -7.1 -4.39386 | overlap 3209365 TGGAAACGAGCAAAA CGGTC GACAG GACCG CGCCGCACGCGACGG Bphy_2857 3209587 - 3210585 + | phenylacetate-CoA oxygenase, PaaG subunit Bphy_2858 3210625 - 3210909 + | phenylacetate-CoA oxygenase, PaaH subunit TERM 3353 3211517 - 3211507 - g 77 -4.6 -4.66609 | GACGCGACGGAAAAA GCGA TCG CCGC AGCCGGTATCGGCCC Bphy_2859 3210919 - 3211722 + | phenylacetate-CoA oxygenase, PaaI subunit Bphy_2860 3211751 - 3212326 + | phenylacetate-CoA oxygenase, PaaJ subunit Bphy_2861 3212328 - 3213416 + | phenylacetate-CoA oxygenase/reductase, PaaK subunit TERM 3354 3213551 - 3213507 - f 100 -22.2 -2.62396 | opp_overlap 3213508 GATCCGCTTACACTA GGGGCCGCTCGCTACAGGAA GGATG TTCCTGCTGCGAGCGGCCCT TTCTGTTTCCTGGTC TERM 3355 3213508 - 3213550 + F 100 -23.5 -4.37506 | opp_overlap 3213507 ATCCGCTTACACTAG GGGCCGCTCGCTACAGGAA GGATG TTCCTGCTGCGAGCGGCCC TTTCTGTTTCCTGGT Bphy_2862 3213616 - 3214431 + | hypothetical protein Bphy_2863 3214449 - 3215063 + | TetR family transcriptional regulator Bphy_2864 3215315 - 3215980 + | GCN5-related N-acetyltransferase TERM 3356 3216041 - 3216000 - T 100 -16 -4.208 | opp_overlap 3216009, overlap 3216009 CGGCAAAACGACAAA CACCAAAAAGGGCGGCTC TTCAAG GAGCCGCCCTTTTTGTTT GCCCGCACGCCTGAC TERM 3357 3216032 - 3216009 - T 100 -15.3 -4.96106 | opp_overlap 3216009, overlap 3216000 GACAAACACCAAAAA GGGCGGCTC TTCAAG GAGCCGCCC TTTTTGTTTGCCCGC TERM 3358 3216009 - 3216032 + T 100 -16 -5.27335 | opp_overlap 3216000 3216009 GACAAACACCAAAAA GGGCGGCTCT TCAA GGAGCCGCCC TTTTTGTTTGCCCGC Bphy_2865 3216591 - 3216076 - | AsnC family transcriptional regulator TERM 3359 3216318 - 3216358 + g 71 -12.3 -3.28712 | opp_overlap 3216290 CGCCCGCGCGCCCCG GCGTGCCGTCCGCGCGTGC ACT GAGCGCGGGGCCGCCGCGC TTCTCGAGGCGCACA TERM 3360 3217165 - 3217153 - g 71 -10.5 -3.61398 | CTGGCGCGGCAAGAA CGGCG CGG CGCCG AACAGCATCGGCAAC Bphy_2866 3216746 - 3217843 + | 4-hydroxyphenylpyruvate dioxygenase TERM 3361 3217885 - 3217919 + T 87 -15.8 -3.01712 | opp_overlap 3217890, overlap 3217890 TTTAAGGTGGCAAAG AAAAAGGCGAGGACCG ATT CGATCCTCGCCTTTTC TGTTCGGAAGAGCGC TERM 3362 3217890 - 3217914 + T 100 -15.7 -4.66537 | opp_overlap 3217890, overlap 3217885 GGTGGCAAAGAAAAA GGCGAGGACCG ATT CGATCCTCGCC TTTTCTGTTCGGAAG TERM 3363 3217914 - 3217890 - T 100 -17.9 -5.27335 | opp_overlap 3217890 3217885 GGTGGCAAAGAAAAA GGCGAGGACCG ATT CGATCCTCGCC TTTTCTGTTCGGAAG Bphy_2867 3218167 - 3217979 - | hypothetical protein TERM 3364 3218268 - 3218280 + H 78 -9.1 -4.10657 | TTCTGGACCGGTTCC GCGTG TTT CACGC TTTTACACCCTGTAA TERM 3365 3218436 - 3218420 - H 81 -4.3 -5.06451 | TACCATCGCAAAAAA GCCGTCA ACA TGGCGAC CCCGGCCGAAGCATC TERM 3366 3220455 - 3220432 - g 77 -8.8 -4.27316 | gap 1, overlap 3220433 3220449 CTGCGCAACCGAAAA GCGCCGCCGCC GCA AACG-CGGCGC GTATCCCGATCCGGC TERM 3367 3221118 - 3221080 - g 71 -9.5 -3.7282 | TGAGTTCATCAAGAA TCCGAATTGGCGCTTCC CGGGC GCAAGCGCCGACGCGGA CATCCGTGCCGCGGC Bphy_2868 3218513 - 3222115 + | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 3368 3222164 - 3222135 - T 88 -15.1 -3.53012 | opp_overlap 3222141, overlap 3222141 GTTGGTTGTGGCAAA GAAAAAGGGCGCC TTGC GGTGCCCTTTTTC ACGTCATCGCGCCGG TERM 3369 3222158 - 3222141 - T 93 -8.3 -5.27335 | opp_overlap 3222141, overlap 3222135 TGTGGCAAAGAAAAA GGGCGCC TTGC GGTGCCC TTTTTCACGTCATCG TERM 3370 3222141 - 3222158 + T 90 -10.5 -4.63527 | opp_overlap 3222141 3222135 TGTGGCAAAGAAAAA GGGCGCC TTGC GGTGCCC TTTTTCACGTCATCG Bphy_2869 3224473 - 3222188 - | malate dehydrogenase TERM 3371 3222593 - 3222611 + g 78 -7.4 -4.35524 | opp_overlap 3222560 3222583, overlap 3222594 3222607 AGACAGCAGCGCGAC CTTCGGCA CGA TGCCGAAC TTTTCGATTTCGCGC Bphy_2870 3226002 - 3224770 - | major facilitator transporter TERM 3372 3224890 - 3224875 - G 74 -5.4 -4.54727 | gap 1, overlap 3224876 3224877 CGCCGCAAACGAAAA CTGCGCT GCC AGCGC-G CCCACCGCCACGGGC TERM 3373 3225163 - 3225124 - G 77 -8.5 -4.31164 | gap 1, overlap 3225126 CTGATAGAACAGAAA GGCCGGC-TTGCGGCCGA AGCGG TCGGCCGCGATACCGAAC AGCCAGATGCCGGCC TERM 3374 3225430 - 3225405 - G 71 -7.4 -4.07568 | CCCGTTCGGTGAAAA GCGCCGGCTC CTCGAC GCGCCGCCGC ACGAAAAATGACGCG TERM 3375 3225451 - 3225439 - G 75 -3.3 -4.72272 | overlap 3225442 CCGCCGCACGAAAAA TGACG CGA CGGCA GGCAGCAGCCCTAAC Bphy_2871 3226347 - 3227033 + | orotate phosphoribosyltransferase TERM 3376 3227111 - 3227085 - T 100 -22.4 -4.34402 | opp_overlap 3227085 GCCTGCATACGAAAA CGCCGCCTGTCT TGA AGACAGGCGGCG TTTTTTATTGCGTAT TERM 3377 3227085 - 3227111 + T 100 -22.4 -5.49234 | opp_overlap 3227085 GCCTGCATACGAAAA CGCCGCCTGTCT TGA AGACAGGCGGCG TTTTTTATTGCGTAT Bphy_2872 3227879 - 3227172 - | two component LuxR family transcriptional regulator TERM 3378 3228100 - 3228089 - H 70 -2.2 -4.72272 | CTTGGGCACTAAAAA GGAC AACA ATCC CTCGTAAAGACAATT Bphy_2873 3228145 - 3228762 + | PEBP family protein Bphy_2874 3228872 - 3229447 + | flavodoxin/nitric oxide synthase TERM 3379 3229493 - 3229512 + F 84 -7.2 -4.8543 | gap 1, overlap 3229497 CTGTCACGCCGCTGT CACTGTTGC GGC GCAAC-GTG TTTTTCTGCCGATTC Bphy_2875 3229618 - 3230565 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 3380 3230602 - 3230633 + T 77 -10.2 -3.81339 | opp_overlap 3230608, overlap 3230608 CGCCGTCCCGCACAC GACAAAGCCGGC ATTCACGC GCCGGCTTTTTC TTTGGCTTATCAGTC TERM 3381 3230627 - 3230608 - T 75 -8.5 -4.0162 | opp_overlap 3230602 3230608 CCCGCACACGACAAA GCCGGCA TTCACG CGCCGGC TTTTTCTTTGGCTTA TERM 3382 3230608 - 3230627 + T 93 -7.8 -5.33026 | opp_overlap 3230608, overlap 3230602 CCCGCACACGACAAA GCCGGC ATTCACGC GCCGGC TTTTTCTTTGGCTTA TERM 3383 3230947 - 3230929 - T 100 -13.8 -5.81412 | GCCAGGCAAAAAAAA GCCCGCCA AGG CGGCGGGC TGAATCCATATCAGA TERM 3384 3231081 - 3231097 + T 89 -3.6 -5.63103 | overlap 3231076 GACAAAACGTCGCAC CACACC ATCTG GGCGTG TTTTTTTGCTTCGCA Bphy_2876 3231786 - 3231130 - | lysine exporter protein LysE/YggA TERM 3385 3231816 - 3231848 + r 100 -20.5 -3.53761 | opp_overlap 3231816 GCTGAAGAGAAAAAA CGGGCGGGACGGACA TTA TGCCCGCCCCGCCCG TTTCGACGCCGGTTC TERM 3386 3231848 - 3231816 - R 100 -24.9 -5.47159 | opp_overlap 3231816 GCTGAAGAGAAAAAA CGGGCGGGACGGACA TTA TGCCCGCCCCGCCCG TTTCGACGCCGGTTC Bphy_2877 3232804 - 3231935 - | 6-phosphogluconate dehydrogenase NAD-binding TERM 3387 3232666 - 3232628 - G 81 -9.5 -4.21194 | gap 1, overlap 3232630 GGCGAGCATCGAAAA GACGGCGTCGCCCGTGAA GGCT TCCGCGGGCGA-ACCGAC CACCTGCGCACCCAG TERM 3388 3232664 - 3232630 - G 74 -10.7 -3.70674 | gap 1, overlap 3232628 CGAGCATCGAAAAGA CGGCGTCGCCCGTGAA GGCT TCCGCGGGCGA-ACCG ACCACCTGCGCACCC TERM 3389 3232982 - 3232939 - g 77 -11 -3.71848 | gap 1, opp_overlap 3232944 3232948, overlap 3232940 CGCTTCTACGAAGAA TTGAACGACTTCCTGGCGCGG CCG CTGCGCC-GGCAATCGTTCAG TTGCAAGTGCGCGCG TERM 3390 3232981 - 3232940 - g 77 -14.5 -2.82895 | gap 1, opp_overlap 3232944 3232948, overlap 3232939 GCTTCTACGAAGAAT TGAACGACTTCCTGGCGCGG CCG CTGCGCC-GGCAATCGTTCA GTTGCAAGTGCGCGC Bphy_2878 3232906 - 3233661 + | hypothetical protein Bphy_2879 3233751 - 3234038 + | hypothetical protein TERM 3391 3234110 - 3234131 + T 100 -15.9 -5.5112 | opp_overlap 3234110 ACCCGAAATGCAAAA GGCCGAAGC ATCT GCTTCGGCC TTTTTTATTGCTGCG TERM 3392 3234131 - 3234110 - T 100 -15.9 -4.35926 | opp_overlap 3234110 ACCCGAAATGCAAAA GGCCGAAGC ATCT GCTTCGGCC TTTTTTATTGCTGCG Bphy_2880 3234402 - 3234193 - | hypothetical protein Bphy_2881 3234688 - 3235698 + | hypothetical protein TERM 3393 3235684 - 3235715 + T 70 -12.2 -2.71712 | overlap 3235683 ATCTCATCGGATTCG GCGGAGCCTGCCTG AACG CAGGCAGGCATGGC GTTTCCCGAAACCAG Bphy_2882 3236010 - 3235744 - | hypothetical protein Bphy_2883 3237642 - 3236467 - | major facilitator transporter TERM 3394 3237151 - 3237133 - G 73 -9.5 -3.86252 | CGCGAGCAAAGAGAA CGCGACG CACGC CGCCGCG AGCGCGAACCACGCA TERM 3395 3237382 - 3237349 - G 74 -10.1 -3.71672 | gap 1, opp_overlap 3237372, overlap 3237345 GCTCACGAAAACGAA GGCGC-TCGCGATGCC CGT GGCGACGCGCTGCGCC AACAGCGCGTTCGTA TERM 3396 3237627 - 3237610 - G 80 -8.3 -4.36931 | overlap 3237612 CAATGCATAGGAAAA GCGCGCG AGCC CGAGCGC GATCGCGCTGCCCAT TERM 3397 3238203 - 3238226 + H 100 -15.3 -4.63932 | TCATCGGGACGTTTC GCGCCACGG CTTTGA CCGTGGCGC TTTTCTTGCGAAATC Bphy_2884 3238315 - 3239265 + | diguanylate cyclase TERM 3398 3239492 - 3239506 + F 78 -4.2 -4.93696 | overlap 3239494 CTGCCAAAACGCCGC CCCATC CTT GATGTG TTTTTGATGTTTCGG TERM 3399 3240000 - 3240013 + G 79 -4.5 -4.86001 | gap 1, overlap 3239999 3240004 GGAAAAGCTGTGCCT CG-CGG CGC CCGACG TTTTTGTGCGCTACT TERM 3400 3240138 - 3240155 + G 73 -5.5 -4.38712 | overlap 3240120 GGCGCAGCAGGCGCA CCGTGAT TTCC ATCTCGG TTTTGTCACCGTCGA Bphy_2885 3239581 - 3240777 + | phytanoyl-CoA dioxygenase Bphy_2886 3240799 - 3241953 + | oxidoreductase domain-containing protein TERM 3401 3242004 - 3241976 - T 100 -19 -5.4505 | CGCTGGAAGAAAAAA GAGCCCTGTTCC GCGGG GGAACAGGGCTC GGTGGATGAGACATA Bphy_2887 3242773 - 3242507 - | hypothetical protein Bphy_2888 3242843 - 3243109 + | hypothetical protein TERM 3402 3243531 - 3243576 + G 73 -14.6 -2.52015 | overlap 3243530 CGTTGACCAGCCAGT CGCATGCCGCGCTGCTCGAT GCGTTG AACGTGCGCCGCGGCGTGCG CTTCCTCGATGTCGC Bphy_2889 3243437 - 3244258 + | methyltransferase type 11 Bphy_2890 3246187 - 3244370 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 3403 3246211 - 3246244 + r 74 -10.9 -3.5268 | gap 1, overlap 3246217 GTCCTTTGCAGAGTT GGGGGTCGTG-GCGCG TCT CGCGCACGCGTTTCCC TTAGCTTTTCTTTTT TERM 3404 3246217 - 3246238 + r 77 -10.1 -3.80083 | gap 1, overlap 3246211 TGCAGAGTTGGGGGT CGTG-GCGCG TCT CGCGCACGCG TTTCCCTTAGCTTTT Bphy_2891 3247606 - 3246245 - | UDP-N-acetylglucosamine pyrophosphorylase Bphy_2892 3248726 - 3247716 - | PP-loop domain-containing protein Bphy_2893 3249122 - 3248730 - | dihydroneopterin aldolase Bphy_2894 3250026 - 3249196 - | short-chain dehydrogenase/reductase SDR TERM 3405 3249342 - 3249309 - G 85 -16.7 -2.9914 | gap 1, opp_overlap 3249336 CATCCGCGAGATACA GCGCCGCCGCGACGAG ATC CTCGACGCG-CGACGC CCGGCCGAGCGGCGT Bphy_2895 3250040 - 3251233 + | hypothetical protein Bphy_2896 3251258 - 3251452 + | hypothetical protein Bphy_2897 3252706 - 3251453 - | polynucleotide adenylyltransferase/metal dependent phosphohydrolase TERM 3406 3251714 - 3251694 - G 71 -7.5 -4.08064 | AATGCTTCGGCAAAA CGCGCCG GCTTGCG CAGCGCG TCGCTGCGCTCGAAA TERM 3407 3251776 - 3251815 + g 77 -12.8 -3.33696 | TCACGCGATGGATGT TGCCGTGCTCGCGCGC CACCAGCA GCGCGAGATCGCGGCA TTCGTTCGGCACGCG TERM 3408 3252274 - 3252257 - G 71 -10.5 -3.63968 | overlap 3252269 GCTGAAATCCGCAAA GCGCGCC GAAA AGCGCGC GACGCGCAGAATGCG TERM 3409 3252281 - 3252269 - G 79 -10.5 -4.0896 | overlap 3252257 AAAGCGCGCCGAAAA GCGCG CGA CGCGC AGAATGCGCACGGGA Bphy_2898 3253350 - 3252703 - | glutathione S-transferase domain-containing protein Bphy_2899 3254339 - 3253383 - | NADH dehydrogenase TERM 3410 3253913 - 3253892 - G 72 -10.9 -3.46647 | overlap 3253890 CCGAGGGACGAAAGA TCGTCGACG CCAG CATCGACGA TGCGTGAATCGCGCG Bphy_2900 3256405 - 3254432 - | lytic transglycosylase catalytic Bphy_2901 3256437 - 3257048 + | 5-formyltetrahydrofolate cyclo-ligase TERM 3411 3257187 - 3257169 - T 100 -8 -5.40474 | overlap 3257171 AGCGGGCGAAAAAAA CGGCGACG CGG CGCCGCAG GCAAGCACCGCAGGC Bphy_2902 3257722 - 3257210 - | putative transcriptional regulator Bphy_2903 3257923 - 3258576 + | allophanate hydrolase subunit 1 TERM 3412 3259619 - 3259590 - g 74 -10.6 -3.73647 | GGCATGCATGAAGAA CGCTGCGCGCGC GTTGCT GCGTCCGCAGCG GTGTAAGACCAATGA Bphy_2904 3258573 - 3259625 + | urea amidolyase related protein Bphy_2905 3259642 - 3260394 + | LamB/YcsF family protein TERM 3413 3260423 - 3260443 + F 88 -15.4 -3.53012 | overlap 3260380 TCAGGCATCAGTCGA CGCCCCGC TTCAT GCGGGGCG TTTGCCAAAAGCGAC TERM 3414 3261145 - 3261165 + G 74 -11.1 -3.61398 | overlap 3261147 CGCGCGTTCTCGGCG GCGACCGAC AAC GTCGGTCTC TTCTTCGGCGAGGAC TERM 3415 3261147 - 3261163 + G 73 -12.3 -3.38812 | overlap 3261145 CGCGTTCTCGGCGGC GACCGAC AAC GTCGGTC TCTTCTTCGGCGAGG Bphy_2906 3260671 - 3261435 + | hypothetical protein TERM 3416 3261519 - 3261541 + G 73 -9.1 -3.94409 | gap 1 GTCGATCGCGACCAT CCGCGCCGCT TCAC GGCGG-GCGG TTTCTGGATCATCTA Bphy_2907 3261432 - 3262388 + | hypothetical protein TERM 3417 3262562 - 3262585 + F 71 -13.2 -2.61322 | gap 1, opp_overlap 3262559, overlap 3262561 3262560 GTTCACAGTCAACGT CCGGCGCATCA ACG TG-TGCGCCGG CTCTTTCGAGAGTCT TERM 3418 3262694 - 3262718 + G 72 -11.3 -3.53012 | CACGCTCGCGTTCGC GCTCGAAGCGC ACC GCGCCTCGCGC TTTCACGAAGCCGAA Bphy_2908 3262614 - 3263225 + | TPR repeat-containing protein Bphy_2909 3264412 - 3263219 - | GumN family protein TERM 3419 3264373 - 3264331 - G 100 -24.8 -3.14026 | opp_overlap 3264357 3264361 3264363 GACAGCCAGACGCAA CGCGCGTGCCGCCCGCACGC ATC GCGTGCAGACGGCGCGCGTG ACGGCGCGCGGGATC Bphy_2910 3265442 - 3264405 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Bphy_2911 3266443 - 3265439 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 3420 3265505 - 3265550 + g 77 -12.6 -3.66018 | gap 3 GATGCAGCGAACCTG GGCTGCGGCGTCGTGATCG-GCC AGC GGCGCGAGCGCGG-GCCGC-GCC TTGTTGCAGTCGTCG Bphy_2912 3267362 - 3266445 - | binding-protein-dependent transport systems inner membrane component TERM 3421 3266700 - 3266676 - G 75 -7.8 -4.25848 | overlap 3266664 AATCGCCGACGAAAA GCCGAGCGTG GCCTG CACGATCAGC GGCGCCGTGCAGTTC Bphy_2913 3268463 - 3267450 - | nickel-transporting ATPase TERM 3422 3268536 - 3268495 - R 86 -5 -5.24129 | gap 1, opp_overlap 3268523 3268524, overlap 3268496 3268500 CTTGGTGAGAAAAAA CGCAACCGGCGACGAGGGC TCGTG ACCCCGGTCGCCGGAC-CA TTTCGACCAGTCTTC TERM 3423 3268532 - 3268500 - R 88 -14.8 -3.55457 | opp_overlap 3268523 3268524, overlap 3268496 3268495 TGAGAAAAAACGCAA CCGGCGACGAGGGC TCGTG ACCCCGGTCGCCGG ACCATTTCGACCAGT Bphy_2914 3270249 - 3268618 - | extracellular solute-binding protein TERM 3424 3270391 - 3270367 - R 91 -17.1 -3.48395 | opp_overlap 3270362 3270368, overlap 3270368 ACCCGCCGGATACAA CGCTGCCGCGC CAA GCGCGGCAGCT GTCTCGAATTTGAAC TERM 3425 3270390 - 3270368 - R 100 -20.6 -2.68823 | opp_overlap 3270362 3270368, overlap 3270367 CCCGCCGGATACAAC GCTGCCGCGC CAA GCGCGGCAGC TGTCTCGAATTTGAA TERM 3426 3270368 - 3270390 + r 100 -20.6 -2.9348 | opp_overlap 3270368 3270367, overlap 3270362 CCCGCCGGATACAAC GCTGCCGCGC CAA GCGCGGCAGC TGTCTCGAATTTGAA Bphy_2915 3272078 - 3270435 - | extracellular solute-binding protein TERM 3427 3272271 - 3272245 - R 100 -13.7 -5.56673 | opp_overlap 3272245 ACGCACAATAAAAAA GCGGCGCACGC CTGGC GCGTACACCGC TTCTCACGTCGGCCA Bphy_2916 3273123 - 3272293 - | 5,10-methylenetetrahydrofolate reductase TERM 3428 3272854 - 3272891 + g 86 -13.5 -3.90112 | gap 1, opp_overlap 3272853 3272854 3272880 GACGATGTGACGAAT GCCATGCGAGCGGTATTC GTT GAGAATCGCTCGCA-GGC TTTCCTTCGACGAGC TERM 3429 3273039 - 3273061 + g 83 -14.8 -3.29144 | opp_overlap 3273039 GCTTGAGCGGCAGAA GCTGCGCGCG CGT CGCACGCAGC TTCTCGAGCCCCTCC TERM 3430 3273061 - 3273039 - G 90 -17 -3.31144 | opp_overlap 3273039 GCTTGAGCGGCAGAA GCTGCGCGCG CGT CGCACGCAGC TTCTCGAGCCCCTCC Bphy_2917 3273582 - 3273142 - | membrane protein of unknown function TERM 3431 3273600 - 3273634 + r 73 -12.1 -3.15427 | gap 1, opp_overlap 3273573 GCTGCGTGCTTCATC CGGTGCGGG-GCACGC CGTG GCATGCGCCCGCACCC TTCATGCCGCCTGTT Bphy_2918 3275077 - 3273656 - | adenosylhomocysteinase TERM 3432 3273906 - 3273890 - G 78 -13.7 -3.24747 | GTTCGACATCACGAA CGACGGG TGG CCCGTCG CGCAGCCCAGGTTCA Bphy_2919 3276090 - 3275275 - | glycosyl transferase family protein Bphy_2920 3276934 - 3276212 - | LrgB family protein Bphy_2921 3277449 - 3276958 - | LrgA family protein Bphy_2922 3277563 - 3278522 + | LysR family transcriptional regulator TERM 3433 3278552 - 3278527 - T 100 -14.7 -4.78848 | opp_overlap 3278527 3278541 CGCTGAAATAGAAAA TGCCGCACGGT CTGC ACCGGGCGGCA TGCTGTCCGGCGTTG TERM 3434 3278527 - 3278552 + T 78 -14.7 -2.62933 | opp_overlap 3278527, overlap 3278541 CGCTGAAATAGAAAA TGCCGCACGGT CTGC ACCGGGCGGCA TGCTGTCCGGCGTTG Bphy_2923 3280359 - 3278587 - | OmpA/MotB domain-containing protein TERM 3435 3279553 - 3279539 - G 74 -10 -3.73224 | TGACGGCCGAGGAAA TCCGTC GCC GACGGA CAGTACGCAAGTGCG TERM 3436 3279645 - 3279699 + g 78 -13.5 -3.53091 | gap 2 ACTGCTGCGCCTTGA GC-CCGGC-GTGCCGTACTTCGCGCGC CTC GCGCGCGGGCTGCGCGACAGCCGGCGC TTTCGCGGACAACGT TERM 3437 3281200 - 3281221 + G 70 -5.1 -4.36914 | gap 1, overlap 3281184 3281202 CGCAGCCGGGTGCGA TGGTCGCGCG TTG CGC-CGGCTA TTTTCTGCACGCGCA TERM 3438 3282478 - 3282451 - g 72 -11.3 -3.53343 | gap 1 AAGGCTGTGGCGAAA GCGGAC-GCGTG TACGG CACGCTGCCCGC CGCCTTCGATCACGC Bphy_2924 3280851 - 3282524 + | acyl-CoA dehydrogenase domain-containing protein TERM 3439 3282697 - 3282670 - T 84 -12.6 -3.65812 | overlap 3282688 3282689 GTCTTGGGAACACAA CGCGCCGCGCAT CTGA AAGCGCTGCGCG CCGTGCTGCTCGACA Bphy_2926 3283639 - 3283301 - | flagellar biosynthetic protein FlhB Bphy_2927 3285012 - 3283639 - | hypothetical protein TERM 3440 3283666 - 3283687 + g 80 -13.7 -3.30124 | opp_overlap 3283661 GTCGACATCATGGCT GCCGGCGTC GTGC GATGCCGGC TTGTCAGCCGTCGCG TERM 3441 3283968 - 3284001 + g 71 -12.3 -3.19157 | gap 1, overlap 3283969 3283993 ACGGATATTCGTCAT CGGCGGACGCGGCGCC ATT GCCGCTGCG-CCGCCA TTCGTCGCCTTCCTG TERM 3442 3283969 - 3284000 + g 77 -15.8 -2.51173 | gap 1, overlap 3283968 3283993 CGGATATTCGTCATC GGCGGACGCGGCGCC ATT GCCGCTGCG-CCGCC ATTCGTCGCCTTCCT TERM 3443 3285044 - 3285069 + r 100 -15.5 -4.11692 | gap 1, overlap 3285045 GCATTGACGCTGCGT G-GCCGCTAGCG GGT CGCTAGCGGCTC TTTTGAAACTGCGTG TERM 3444 3285045 - 3285067 + r 100 -19.2 -3.65542 | overlap 3285044 CATTGACGCTGCGTG GCCGCTAGCG GGT CGCTAGCGGC TCTTTTGAAACTGCG Bphy_2928 3285421 - 3285092 - | putative flagellar protein FliT Bphy_2929 3285852 - 3285418 - | flagellar protein FliS Bphy_2930 3286563 - 3286228 - | flagellar hook-basal body complex subunit FliE TERM 3445 3286370 - 3286391 + g 74 -5 -4.4767 | GCGCCGATTTCGAAT GCGTGGGC TTCGCT GACCGCGC TTTTCTGGTCGCTGC Bphy_2931 3286802 - 3288583 + | flagellar M-ring protein FliF Bphy_2932 3288573 - 3289568 + | flagellar motor switch protein FliG Bphy_2933 3289555 - 3290232 + | flagellar assembly protein FliH TERM 3446 3290450 - 3290411 - g 77 -8.5 -4.25104 | gap 2 GCGTTCGCACGAAAA GCCTGCGAGCGCGCCGCAT CCCG AAGCGGCGC-C-CGCGAGC CGCGACTCGGCGCCC TERM 3447 3290567 - 3290605 + G 73 -14.4 -2.86164 | opp_overlap 3290560 3290555 CAACCAGATCGCGCG CCCGCTGCGCGCGTGCGG CCG CCTGACGCGTGCGGCCGG TCTCGTGCTTGAAGC Bphy_2934 3290226 - 3291869 + | FliI/YscN family ATPase TERM 3448 3292272 - 3292233 - g 75 -15.1 -2.74488 | gap 2, overlap 3292256 GAAGTACTGGAAGCA CGCGGCGTCGCCGCCGA AGCCAAGG TCG-CGGCG-CGCCGCG ATCAACGCGATGCCG Bphy_2935 3291885 - 3292334 + | flagellar export protein FliJ TERM 3449 3292370 - 3292338 - f 85 -15.5 -3.02461 | overlap 3292326 GAAGGCGCGTGAAGA CGCAGCCCGCCGCAT GAG ATGCGGCGCGCAACG GGACTGACACGACTA TERM 3450 3292482 - 3292497 + G 79 -10.4 -4.07885 | opp_overlap 3292470 GAACGGCGCGAACGC CGGCAG CGCG CTGCCG TTTTCGACCACGCTG TERM 3451 3292825 - 3292794 - g 75 -12.3 -3.50853 | gap 2 GGTTTCGAAGCAGAA CGAC-GCCGCGC-CG ACCA CGAGCGCGGCCGCCG CTGAGACTGCCGCAG TERM 3452 3293412 - 3293358 - g 86 -15.4 -3.2614 | overlap 3293359 GACCGCGGACACGAA CGCCGCGCTCGCCGCGACTCAGGCCG CAT CGGCGGCCGCCGCCGCGAGCGCGACT GCCACGCTCACTCAA TERM 3453 3293411 - 3293359 - g 89 -18.9 -2.5547 | overlap 3293358 ACCGCGGACACGAAC GCCGCGCTCGCCGCGACTCAGGCCG CAT CGGCGGCCGCCGCCGCGAGCGCGAC TGCCACGCTCACTCA Bphy_2936 3292399 - 3293910 + | flagellar hook-length control protein TERM 3454 3294037 - 3294012 - f 72 -9.8 -3.77206 | gap 1, overlap 3294015 3294016 GAGAAGGTCAGCAAA GAATGCGGCTC GCATG GAGCCGC-TTC GCCTTGCCAACGCCT TERM 3455 3294035 - 3294015 - f 71 -8.2 -4.01158 | overlap 3294012 3294016 AAGGTCAGCAAAGAA TGCGGCTC GCATG GAGCCGCT TCGCCTTGCCAACGC TERM 3456 3294034 - 3294016 - f 71 -11.7 -2.99972 | overlap 3294015 3294012 AGGTCAGCAAAGAAT GCGGCTC GCATG GAGCCGC TTCGCCTTGCCAACG TERM 3457 3294239 - 3294229 - f 80 -4.6 -4.91852 | GCCAGCAAAAACAAA CCAG AAC CCGG CAGGCAAACAAACGA Bphy_2937 3294343 - 3294846 + | flagellar basal body-associated protein FliL Bphy_2938 3294911 - 3295909 + | flagellar motor switch protein FliM TERM 3458 3296182 - 3296170 - g 70 -5.5 -4.25104 | overlap 3296171 TGGGCCGCACGAAAA TCGCG ATC CGCAA CCTGCTGCAACTCGC Bphy_2939 3295902 - 3296366 + | flagellar motor switch protein FliN TERM 3459 3296437 - 3296476 + G 78 -13.6 -3.27525 | gap 1, overlap 3296436 3296433 CGCCCGTCTCATGTC GACGGTTGCACTG-GCGTG TCT CACGCTCGGTGCAAGCGCC TTCCATTTCGCGCAC Bphy_2940 3296363 - 3296989 + | flagellar biosynthesis protein FliO Bphy_2941 3296989 - 3297834 + | flagellar biosynthetic protein FliP Bphy_2942 3297862 - 3298131 + | flagellar biosynthetic protein FliQ Bphy_2943 3298166 - 3298948 + | flagellar biosynthetic protein FliR TERM 3460 3299019 - 3299032 + T 70 -4.5 -4.43911 | gap 1 GTTCGGTTTTGGGTT CGCTGG CAT CC-GCG TTTTGCTTCCGGTTT TERM 3461 3299300 - 3299282 - T 88 -10.2 -4.4267 | CCTCAAAATGCAAAA CCGGCACC AAA GGCACCGG TCCGGTAAACAGCAC Bphy_2945 3299805 - 3299359 - | FlgN family protein Bphy_2946 3300244 - 3299903 - | anti-sigma-28 factor, FlgM Bphy_2947 3301624 - 3300350 - | flagella basal body P-ring formation protein FlgA TERM 3462 3300813 - 3300757 - G 71 -12.8 -2.98823 | gap 1, overlap 3300755 TGGCCTGCAGATACA GCGTCCAGGGACGCTCGCCCGCGCAGC GCAC GCCG-ACCGTCGTGCGGCCCCAGACGC GCGCCCCCGTCGGCA TERM 3463 3301782 - 3301771 - H 79 -7.2 -4.70659 | opp_overlap 3301772, overlap 3301772 CGTCACATGCAAAAA GGCC TTCC GGCC GGCGCAGTCGAAACG TERM 3464 3302066 - 3302031 - g 77 -5.4 -4.63218 | gap 1, overlap 3302062 GCGCGCTGAAGAAAA GCG-GCGGCTCGACG GCGGGCG CGTCGAACAACTCGC AACTCGCAATGACGC Bphy_2948 3301865 - 3302356 + | flagellar basal-body rod protein FlgB Bphy_2949 3302463 - 3302888 + | flagellar basal-body rod protein FlgC Bphy_2950 3302900 - 3303613 + | flagellar hook capping protein Bphy_2951 3303647 - 3305152 + | flagellar basal body FlaE domain-containing protein Bphy_2952 3305175 - 3305933 + | flagellar basal-body rod protein FlgF Bphy_2953 3305984 - 3306772 + | flagellar basal-body rod protein FlgG Bphy_2954 3306808 - 3307518 + | flagellar L-ring protein Bphy_2955 3307521 - 3308708 + | flagellar P-ring protein Bphy_2956 3308721 - 3309653 + | flagellar rod assembly protein/muramidase FlgJ Bphy_2957 3310048 - 3310797 + | YcgR family protein TERM 3465 3310927 - 3310958 + F 70 -2.1 -4.86731 | gap 1, overlap 3310929 3310930 TTTTGCTTCTGGTTG GCTGGCGTTGCCCC TGTGC GGGGC-ACACCTAC TTTTCTTTGCCGCGG TERM 3466 3311520 - 3311488 - f 76 -4.6 -4.86731 | overlap 3311491 CCGCGGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACGCCAGC CAACCAGAAGCAAAT TERM 3467 3311622 - 3311608 - f 81 -4.2 -5.13016 | AAGCAAAACCAAAAA GGCG TAGCCCG CGCC GAGCAGGCAAACATG TERM 3468 3313350 - 3313316 - g 70 -11.5 -3.3197 | overlap 3313305 3313302 3313319 3313336 ACATCACGGCGACAA CGACGCCCGTG-CCG TATAACC CGGCCACGGGCG-CG TCGATGACGATCACG Bphy_2958 3311800 - 3313773 + | flagellar hook-associated protein FlgK Bphy_2959 3313788 - 3315008 + | flagellar hook-associated protein 3 TERM 3469 3315044 - 3315072 + T 84 -3.7 -5.1971 | overlap 3315011 ACTTCGTCTCGGCGA CGCCTGGCTCTTT TTT GGAGGACTGGGCG TTTTTGCTTTTTGCT TERM 3470 3315289 - 3315255 - T 93 -10.9 -4.56914 | gap 1, overlap 3315260 3315279 CTATTCAAACCAAAA CCAAAGAGCCGATCTT AAAA AAGATCGGCTCTC-GA AGAAACGATTTACCG TERM 3471 3315285 - 3315260 - T 100 -16.3 -4.29472 | overlap 3315255 3315279 CAAACCAAAACCAAA GAGCCGATCTT AAAA AAGATCGGCTC TCGAAGAAACGATTT Bphy_2960 3316059 - 3315325 - | RNA polymerase, sigma 28 subunit, FliA/WhiG Bphy_2961 3316964 - 3316083 - | flagellar biosynthesis protein FlhG Bphy_2962 3318879 - 3316945 - | GTP-binding signal recognition particle TERM 3472 3318069 - 3318123 + g 73 -9.1 -3.82604 | gap 2, overlap 3318061 TGACGTGGCCCTTGT GCGCGGCGCG-CCGGGCG-GCGAGTTG CGC CGCTTCGCGCGCCCAGTCGGGCTTCGC TTCTTCGTTCACTGC TERM 3473 3319068 - 3319038 - R 90 -16 -3.53091 | ACCCGCGCCGCGAAA CGGGCGCGGCCTCC ATC GGGAGCCGCGCGCG CCAGTGAAGAAGGCC TERM 3474 3319108 - 3319077 - R 100 -18.1 -3.05384 | gap 1, overlap 3319080 GCGCGCGCCAGTGAA GAAGGCCGG-CCGC GAAAT GCGGACCGGCCTTC GAGAAAAGAAGCGCA TERM 3475 3319105 - 3319080 - R 88 -14 -3.67597 | gap 1, overlap 3319077 CGCGCCAGTGAAGAA GGCCGG-CCGC GAAAT GCGGACCGGCC TTCGAGAAAAGAAGC Bphy_2963 3321275 - 3319173 - | flagellar biosynthesis protein FlhA TERM 3476 3319293 - 3319275 - G 82 -16 -3.14132 | GCTGCGCCGCAGGAA GCGCGCGA GCA TCGCGCGC AACGAATGCTGGACC TERM 3477 3320276 - 3320286 + g 91 -8.2 -4.77036 | overlap 3320271 3320275 TCGACGTCTTGCTCT GCGC AGC GCGC TTTTTCATCGTGCGC Bphy_2964 3322507 - 3321272 - | flagellar biosynthetic protein FlhB TERM 3478 3321328 - 3321356 + g 70 -11 -3.31144 | gap 1 CCTCGGCAGCTTCCT GGCCGGCGTCGTC GTCC GAC-ACGCCGCCC TTGTCCAGCTCCGGC TERM 3479 3322397 - 3322452 + g 95 -8.1 -5.03314 | gap 1, overlap 3322384 3322397 3322405 CAGCTCGCGCGAGCG CGCAACCTGCCCCTCCTCGCGCGCCT TTTCC AGGCGC-CGGGGGGTGGCTGATTCGG TTTTTTCGAGGTCGC TERM 3480 3322397 - 3322451 + g 74 -11.4 -3.61506 | gap 2, overlap 3322384 3322397 3322405 CAGCTCGCGCGAGCG CGCAACCTGCCCCTCCTCGCGCGCCT TTTCC AGGCGC-CGGGGGGTGGCTGATT-CG GTTTTTTCGAGGTCG TERM 3481 3322405 - 3322444 + g 80 -15.7 -2.8838 | gap 1, overlap 3322384 3322397 3322397 GCGAGCGCGCAACCT GCCCCTCCTCGCGCGCCT TTTCC AGGCGC-CGGGGGGTGGC TGATTCGGTTTTTTC TERM 3482 3322499 - 3322511 + g 88 -9.1 -4.65895 | GCTCTCCAGCTGGAA GGGCA ACA TGCCC TTTTTCAGTGAGAGC Bphy_2965 3323960 - 3322692 - | hypothetical protein Bphy_2966 3324543 - 3323977 - | hypothetical protein Bphy_2967 3325615 - 3324896 - | chemotaxis phosphatase, CheZ TERM 3483 3325019 - 3325048 + g 73 -12.1 -3.32844 | GCCCGTCGGCGACAT CGGCTCGTGCTGG GCTT CCGCCACGAGCTG TTGTGCCGTCGCGGC Bphy_2968 3326012 - 3325617 - | response regulator receiver protein Bphy_2969 3327188 - 3326085 - | response regulator receiver modulated CheB methylesterase TERM 3484 3326764 - 3326809 + g 71 -11.8 -3.21395 | overlap 3326762 GACGCCGGCGCATGC TGCGCGGGCGCGGCCTG-GCGC ACGC GCGCGCGGGCTGCGGC-GCGGA TCTTGTCGGCGAGCT Bphy_2970 3327985 - 3327194 - | hypothetical protein Bphy_2971 3328923 - 3327982 - | MCP methyltransferase, CheR-type TERM 3485 3328722 - 3328754 + g 87 -17.6 -2.90763 | opp_overlap 3328717 3328739 GGCGGAACGAGTCGA GCCCGCGCGCGCGC AAACG GCGCGCGAGCCGGC TGTATGCCATGTCCC TERM 3486 3329062 - 3329097 + r 80 -10.3 -4.07107 | opp_overlap 3329061, overlap 3329092 3329093 3329094 CCTGCTTTCAACCAT GCTGCCCGCGGCGCG ATCGAG CCTGCCGTGTGCAGC TTTCTGCTGTGTTCT Bphy_2972 3331017 - 3329224 - | methyl-accepting chemotaxis sensory transducer TERM 3487 3329287 - 3329305 + g 74 -11.6 -3.61517 | TCGCGGCGCCGGTTC GGCGGCCG CCG CGGGCGCC TTCTTCACCACGGGT TERM 3488 3329378 - 3329406 + g 72 -11.6 -3.54307 | GGTTGCGCAGGAGCC GGCGCCTTCGCG GCATG CGCGACGGCGGC TTTCACGCGGCTCTT TERM 3489 3330660 - 3330688 + g 100 -19.7 -3.65201 | CGCGCTTCGCGACCA CGGCGTCGATCAG CGA CTGATCGATGCCG TTCTTCGGGGTGTTC Bphy_2973 3331598 - 3331071 - | CheW protein TERM 3490 3331107 - 3331119 + g 70 -5.5 -4.24204 | CAATGCCATTTCCCG GCTGG TCA TCAGC TTTTCGATGTCCATC TERM 3491 3331648 - 3331676 + r 71 -10.1 -3.60792 | TCGGTTTCACGCGAG CGAGAGCGCCGCA CCG TGCGACGCCCGCG TTTCGCGGTTCAGCG Bphy_2974 3333957 - 3331639 - | CheA signal transduction histidine kinase TERM 3492 3332853 - 3332886 + g 71 -13.1 -2.94144 | gap 1, overlap 3332850 CGGCCGCTGCCGGAC GCGCCTTGCGATCGCC TTC GGCGGATGCA-GGCGC TGCTTTCGGTGCGGA TERM 3493 3333512 - 3333569 + g 71 -10.4 -3.57144 | gap 2 ACTGCCACAGCGGGC GCTGCCACG-GGTGCC-GGCGCTGCAGC GGGT GCGGCGGCGGCAGGCACTTCGCCGCGGC TTTCGGCGTGCAGGC Bphy_2975 3334393 - 3334031 - | response regulator receiver protein Bphy_2976 3335572 - 3334463 - | OmpA/MotB domain-containing protein TERM 3494 3334511 - 3334541 + g 84 -14.6 -3.42459 | overlap 3334512 GTCAGCCGCGCCCTG TGCGGCTGCCGCCG CTT CGACGGTAGCCGCC TTGCTCTTCTCCATC TERM 3495 3334512 - 3334540 + g 86 -18.1 -2.64993 | overlap 3334511 TCAGCCGCGCCCTGT GCGGCTGCCGCCG CTT CGACGGTAGCCGC CTTGCTCTTCTCCAT TERM 3496 3335498 - 3335518 + g 72 -9 -4.15044 | gap 1 GTACGCGAGCTTCCA GGC-GCCAC CGTG GTGGCCGCC TTTCTTCGGCGCGGC Bphy_2977 3336445 - 3335585 - | chemotaxis protein MotA TERM 3497 3336451 - 3336439 - G 70 -5.5 -4.25104 | GTGTTCCCACGAAAA TCAGC ACT GCCGA GCCCTCACGAAAAGC TERM 3498 3336482 - 3336465 - R 74 -6.9 -4.2558 | opp_overlap 3336466, overlap 3336466 GAGCCCTCACGAAAA GCGACGG GAGA CCGTCGT TATTCAGGTTTACGG TERM 3499 3336466 - 3336481 + r 75 -10.4 -3.70919 | opp_overlap 3336466 3336465 AGCCCTCACGAAAAG CGACGG GAGA CCGTCG TTATTCAGGTTTACG Bphy_2978 3337217 - 3336606 - | flagellar transcriptional activator FlhC TERM 3500 3337290 - 3337275 - R 93 -11.8 -4.26189 | CGAGAAACGGTAAAA GCGCCG TCGC CGGCGC GCGTAGGGTGGCTTG Bphy_2979 3337667 - 3337347 - | flagellar transcriptional activator TERM 3501 3337758 - 3337738 - H 87 -3.9 -5.40072 | opp_overlap 3337746 3337747, overlap 3337745 3337746 TCGCGTTTAAAAAAA CCACGAACG GCA CGCTTATGG TCAGCGTGCATTTTC TERM 3502 3338924 - 3338893 - g 72 -8.6 -4.07885 | opp_overlap 3338919, overlap 3338916 TATCTGTCCCGAAAA GCGCGTCGATACCG CCAT CAAGATCGCCGCGC AAAGCGGTTTGCCGC Bphy_2980 3338339 - 3339403 + | glycosyl transferase group 1 TERM 3503 3339502 - 3339529 + T 82 -10.6 -4.23892 | opp_overlap 3339507, overlap 3339507 CGGATCGCTTGCACT AAAAAGCCGCCT CCCC GGGCGGCTTTTC TTTTCCGTCGTTCAA TERM 3504 3339507 - 3339524 + T 100 -10.5 -5.10933 | opp_overlap 3339507, overlap 3339502 CGCTTGCACTAAAAA GCCGCCT CCCC GGGCGGC TTTTCTTTTCCGTCG TERM 3505 3339524 - 3339507 - T 93 -9.8 -4.72272 | opp_overlap 3339507 3339502 CGCTTGCACTAAAAA GCCGCC TCCCCG GGCGGC TTTTCTTTTCCGTCG Bphy_2981 3340006 - 3339704 - | histone family protein nucleoid-structuring protein H-NS TERM 3506 3340611 - 3340636 + G 71 -9.1 -3.74158 | gap 1 GGCGCGTATGTGCTG TCCGTGATTGCT TCG GGCAATC-CGGA TTTCCATCTGGTTGC Bphy_2982 3340296 - 3341045 + | MIP family channel protein TERM 3507 3341068 - 3341097 + T 95 -17.9 -3.59202 | opp_overlap 3341073, overlap 3341073 CTATCCAGTCTGCGT GAAAACGGGGCGC TTCG GCGCCCCGTTTGC TTGTATGTCCAAATG TERM 3508 3341073 - 3341092 + T 100 -16.4 -4.06361 | opp_overlap 3341073, overlap 3341068 CAGTCTGCGTGAAAA CGGGGCGC TTCG GCGCCCCG TTTGCTTGTATGTCC TERM 3509 3341092 - 3341073 - T 100 -16.4 -4.07885 | opp_overlap 3341073 3341068 CAGTCTGCGTGAAAA CGGGGCGC TTCG GCGCCCCG TTTGCTTGTATGTCC TERM 3510 3341199 - 3341225 + T 100 -15.9 -4.21607 | overlap 3341183 3341184 CGGCCGATGTAGCAT GGCGCGTTTCC CGCAC GGGAACGCGCC TTTCTATTGGATCGA Bphy_2983 3342067 - 3341246 - | Cof-like hydrolase Bphy_2984 3343066 - 3342170 - | ATPase BadF/BadG/BcrA/BcrD type Bphy_2985 3343206 - 3343802 + | DNA-3-methyladenine glycosylase I TERM 3511 3344014 - 3344027 + F 72 -9.5 -3.72984 | opp_overlap 3343993 3344009, overlap 3343993 3344023 GCCAACACAACGGCT GGCCC TTTT GGGCC TTTCGCTCGTTATAA Bphy_2986 3344256 - 3344681 + | hypothetical protein TERM 3512 3344747 - 3344794 + T 82 -14.3 -2.92613 | opp_overlap 3344754, overlap 3344744 3344792 TTCCAAAGTTCCAAA CGAAAAACGGCGGTGTG-GCTTC TTTC GAAGCTCACACCGCCGTTGG-CG TGCTTTCGCGTGGAA TERM 3513 3344788 - 3344754 - T 100 -20.9 -4.98531 | gap 1, opp_overlap 3344747 3344744 GTTCCAAACGAAAAA CGGCGGTGTG-GCTTC TTTC GAAGCTCACACCGCCG TTGGCGTGCTTTCGC Bphy_2987 3345028 - 3344816 - | ribosomal protein S21 TERM 3514 3344898 - 3344909 + g 72 -7.2 -4.26076 | TTCTTGCGCTTACGA GCCG TCGT CGGC TTTTCGTACGCCTGG Bphy_2988 3346265 - 3345324 - | aldo/keto reductase TERM 3515 3345666 - 3345650 - G 71 -13.7 -2.67515 | opp_overlap 3345665, overlap 3345647 TGTAGTAGCAGACCA CGCCGAG CCG CTCGGCG AGCGCGACCGGTTCG TERM 3516 3346182 - 3346170 - G 75 -7.7 -4.21194 | overlap 3346174 GTCGAGGATCGAAAA CGAAG TCG CTTCG TCGGCCGTCCAGCCG Bphy_2989 3346494 - 3347312 + | flagellin domain-containing protein TERM 3517 3347401 - 3347431 + F 73 -12.7 -2.71712 | gap 1, overlap 3347400 AAAAACAGCTGGATC GCATGGTTGGGAGG CTCG CCTCCC-ATCATGC ATTTGAACGCCGAGA TERM 3518 3348125 - 3348088 - g 81 -12.7 -3.65351 | gap 1 TGACCTCGACCCAAA CGGGCGCCGCCAACACCG TAT CGATATCGGCGG-GCGCG GGCCTCGATGCCGGC TERM 3519 3348620 - 3348590 - g 77 -13.3 -3.30441 | gap 1, opp_overlap 3348610, overlap 3348607 GACGACGCTGGAGAA CGCG-CTGTCGAGC AACA GCTCGACCGTCGCG GCCGTGTTCAACACG Bphy_2990 3347484 - 3348911 + | flagellar hook-associated 2 domain-containing protein Bphy_2991 3348941 - 3349234 + | hypothetical protein TERM 3520 3349294 - 3349309 + T 100 -9 -6.06723 | opp_overlap 3349294 GCGCGGATTGACAAA GCTGCA GCGA TGCAGC TTTTTTTTTCGCCCG TERM 3521 3349309 - 3349294 - T 72 -9 -3.91897 | opp_overlap 3349294 GCGCGGATTGACAAA GCTGCA GCGA TGCAGC TTTTTTTTTCGCCCG TERM 3522 3349355 - 3349387 + T 77 -11.9 -3.53811 | TCTGCGCAGCGAGGT CCGCGATTGCGCCTC ACG GCCGCGCAATCGCCG TTTCAAGGCGCTGCG Bphy_2992 3351880 - 3349406 - | TPR repeat-containing protein TERM 3523 3350525 - 3350483 - G 95 -16.3 -4.03413 | ATCGCCCGAGACAAA GCCCACGCGCA-GCGGCCGCG AGC CGC-GCGGCATGCGCGTGTGC GTGAACGGCGTGACG TERM 3524 3350634 - 3350624 - G 70 -4.6 -4.36914 | overlap 3350627 GCTTGCCTCACAAAA CAGC AAT GCCG TGTGCGCGACGTCGG TERM 3525 3351008 - 3350993 - G 75 -11.8 -3.54543 | ACGGACTTGCGCAAA CGGCGC CGCC GCGCCG CCCCGGTACGAGTCG Bphy_2993 3354262 - 3351893 - | TPR repeat-containing protein TERM 3526 3352055 - 3352005 - G 87 -14.5 -3.64703 | gap 1, opp_overlap 3352026 3352044 3352051 3352054 GTCTGCGCACGCAAA CGCGCGCGCA-GGACGGCGAGGCG CTCC CGCTGCGCGGCCCACGCGCTCGCG AGTGCGATGTATTCG Bphy_2994 3355488 - 3354283 - | methyltransferase type 12 TERM 3527 3354627 - 3354647 + g 86 -14.7 -3.55444 | TCAGTTGCGACAGTT GCTGCGCGA TCG TCGCGCGGC TTTCGACCGTGCGGG TERM 3528 3355081 - 3355051 - G 74 -10.3 -3.72893 | overlap 3355038 CAGGCGCGGATGAAA CTCGACGCCGAGG CCCGT CTCCGGCGTCGCG TTAGGATCGAAACCG Bphy_2995 3356426 - 3355485 - | NAD-dependent epimerase/dehydratase Bphy_2996 3358303 - 3356423 - | TPR repeat-containing protein Bphy_2997 3360426 - 3358300 - | TPR repeat-containing protein TERM 3529 3359763 - 3359785 + g 87 -17.7 -2.8294 | opp_overlap 3359761, overlap 3359761 CGCGGCGATACGACT CGGCCGCGC CCGCT GCGCGGCCG TACTTCTCCAGAATG Bphy_2998 3361150 - 3360461 - | TPR domain-containing protein TERM 3530 3361433 - 3361421 - H 100 -9.1 -5.75945 | ACGGCGCAAAAAAAA CCGCT TTG AGCGG GTGTCGGGCAGCGGT TERM 3531 3362445 - 3362491 + G 73 -12 -3.40403 | opp_overlap 3362408, overlap 3362446 CAGCCCGCCGCGGCT CCGGCAGGCGCGTCGGGTGCCG CGG CTGCATCCGGCGCGCAGGCGGC TTCTGGTGCAACGCC TERM 3532 3362446 - 3362490 + G 77 -15.5 -2.64099 | opp_overlap 3362408, overlap 3362445 AGCCCGCCGCGGCTC CGGCAGGCGCGTCGGGTGCCG CGG CTGCATCCGGCGCGCAGGCGG CTTCTGGTGCAACGC Bphy_2999 3361920 - 3362879 + | cytochrome c class I TERM 3533 3362927 - 3362909 - T 83 -11.7 -3.88232 | opp_overlap 3362909, overlap 3362883 TCCGGCACACAACAA TCCCCGC CCTGT GCGGGGA TTTTTTCTTATGCCT TERM 3534 3362909 - 3362927 + T 100 -11.7 -5.56673 | opp_overlap 3362883 3362909 TCCGGCACACAACAA TCCCCGC CCTGT GCGGGGA TTTTTTCTTATGCCT Bphy_3000 3365130 - 3362935 - | UvrD/REP helicase TERM 3535 3363764 - 3363721 - G 75 -12.5 -3.53012 | gap 2, opp_overlap 3363726 3363730 GGCCTGTCCCGCAAA CGCGCCGAGCGCTTCGAGC GTCGTATT GC-CGACGC-CTCGGCGCG GCGTCGTGATCGCGC TERM 3536 3364877 - 3364887 + g 82 -6.8 -4.68908 | GCGGCGATATGGCGC GGCT CGA AGCC TTTGTTTTCGATCAG TERM 3537 3365297 - 3365345 + H 100 -14.3 -4.07568 | opp_overlap 3365311 3365312 GCATGGCGGGAAGCG CCGCCGTGCCACAATTGCGGCGT TGC GCGCCGCCCCCGTGGCGCGCCGG TTTTGCACGGAACAC Bphy_3001 3365363 - 3366412 + | oxidoreductase domain-containing protein TERM 3538 3366480 - 3366515 + F 72 -6.2 -4.3898 | gap 2, overlap 3366481 TCTTGCTCCCGCCTC TGTT-GCGCCCT-CGG TCGCTT CCGCAGGGCGCGAACC TTTTGTCCCGCTGAT Bphy_3002 3366543 - 3366902 + | putative lipoprotein TERM 3539 3366923 - 3366968 + F 100 -14 -5.78622 | ATCGCGTGCGCCTGC TGCCGCACGGCG-CGTACGCCG CCTG CCGCGCGCGTCGCC-TGCGGCA TTTTTTTTGAAATCA TERM 3540 3367961 - 3367926 - g 74 -4.8 -4.57341 | gap 3, overlap 3367927 3367928 AACGCGCGCGAAAAA GTCTGGGCGACG-GTGC CGCAT GCACGCGCCGCC-AG-C GAAGCGCTCAAGCCG Bphy_3003 3367449 - 3368567 + | glycine cleavage system T protein Bphy_3004 3368684 - 3369064 + | glycine cleavage system H protein TERM 3541 3369114 - 3369082 - f 100 -24.2 -2.81133 | CACTTACCCACGACA GGCGCGGCGCTCGC CGCTC GCGAACGCCGCGCC GGCAGGAACACTCAA TERM 3542 3370461 - 3370423 - g 87 -14.5 -3.64703 | overlap 3370450 GTCGCGTGAGCGAAA CGCGCGTCGGCCTGTCG ATCGA CGAAACGACGACGCGCG CCGACCTCGCCGATC Bphy_3005 3369129 - 3372059 + | glycine dehydrogenase TERM 3543 3372105 - 3372145 + T 100 -21.4 -3.64703 | opp_overlap 3372107 3372112, overlap 3372112 3372143 TGCAACAGCAGACAT GACAAAACCCGGTGACGA TCGAC TCGTCACCGGGTTTTTTC TTTGCATCGCGACGG TERM 3544 3372143 - 3372107 - T 100 -18.2 -2.72954 | opp_overlap 3372105 3372112, overlap 3372112 CAACAGCAGACATGA CAAAACCCGGTGACGA TCGAC TCGTCACCGGGTTTTT TCTTTGCATCGCGAC TERM 3545 3372112 - 3372138 + T 100 -18.1 -5.65927 | opp_overlap 3372112 3372107, overlap 3372105 GCAGACATGACAAAA CCCGGTGACGA TCGAC TCGTCACCGGG TTTTTTCTTTGCATC TERM 3546 3372138 - 3372112 - T 100 -18.1 -4.53163 | opp_overlap 3372105 3372112, overlap 3372107 GCAGACATGACAAAA CCCGGTGACGA TCGAC TCGTCACCGGG TTTTTTCTTTGCATC Bphy_3006 3374212 - 3372167 - | methyltransferase type 12 TERM 3547 3372956 - 3373012 + g 79 -11.3 -3.86822 | overlap 3372931 3372934 GCTGGCGAGTGCCTG CGCGACGCGCACCGACGCCATGCCGTC GCC GTCGTTATGGTTATAGTGCGCGGCGCG TTTCTGACCCAGTTG Bphy_3007 3375498 - 3374209 - | methyltransferase type 11 TERM 3548 3375408 - 3375434 + g 71 -7.3 -4.14739 | gap 1, overlap 3375408 3375411 TCGAATACCAGTTCA CC-ATGCCGGGA TCTT TCCAGGCATCGG TTTTCCACTGGATCA Bphy_3008 3376547 - 3375495 - | N-acylneuraminate-9-phosphate synthase TERM 3549 3375724 - 3375748 + g 71 -10 -3.64703 | overlap 3375738 CCATAGGCTGGTTGG CCGAGCGC CTGCCATGC GCGCTCGG TTTCCGTCACCAGCG TERM 3550 3375738 - 3375769 + g 71 -8 -4.16842 | gap 1, overlap 3375724 GCCGAGCGCCTGCCA TGCGCGCTC-GGT TTCCGTC ACCAGCGCGCGCA TTTCTTCAGGCTCCA TERM 3551 3376086 - 3376134 + g 76 -9.1 -4.09685 | gap 4 GCCCGTGGAGATGAT CATCGGTTTGCC-C-G-TCGCGGCG ACG CGCCG-GATCAGCGGCAAATCGGTG TTTTCGAAGCTGGCG TERM 3552 3376214 - 3376186 - G 83 -9.7 -4.37092 | gap 1 AGCGTTTCGAGAAAA TCGACAGCCGTT TCGTCG AACGGC-GTCGA GAACGCGAGCATGCC TERM 3553 3376313 - 3376326 + g 75 -3.7 -4.63932 | opp_overlap 3376295 3376304, overlap 3376311 CGTAAAGCGATTTGC CCGCC CACA GGCTG TTTTCTTCGCCGATA Bphy_3009 3377332 - 3376631 - | acylneuraminate cytidylyltransferase TERM 3554 3376823 - 3376805 - G 75 -4.4 -4.63218 | opp_overlap 3376805 3376809 GCGGCCCCAATAAAA CTGGCCGG CGT CATGCCAG GTTTCCGGCAGGTCC Bphy_3010 3378495 - 3377329 - | DegT/DnrJ/EryC1/StrS aminotransferase Bphy_3011 3379487 - 3378492 - | polysaccharide biosynthesis protein CapD Bphy_3012 3380181 - 3379561 - | formyl transferase domain-containing protein TERM 3555 3379729 - 3379699 - G 77 -11.1 -3.72576 | GCTCGCGCGATGAAA CGTGCCCGCGC-CGC TTT GCGCGCGCGG-CGCG ATATGCCCGTCGCGC TERM 3556 3380472 - 3380482 + G 72 -8.2 -4.07568 | opp_overlap 3380456 3380453 CTCGCGCGACACCGT CGGC GAT GCCG TTTTCACCCGGAGCA Bphy_3013 3380188 - 3380784 + | hypothetical protein TERM 3557 3380953 - 3380981 + F 83 -13.7 -3.34517 | overlap 3380955 3380956 CGCGTTGGTCGCAGG CGGCGCGGGCGCG GGC CGTGCCCGCCGCG TGTTTCGCCGCCCGT TERM 3558 3380955 - 3380980 + F 78 -14.7 -2.60496 | gap 1, overlap 3380953 3380956 CGTTGGTCGCAGGCG GC-GCGGGCGCG GGC CGTGCCCGCCGC GTGTTTCGCCGCCCG TERM 3559 3380956 - 3380983 + F 74 -11.2 -3.53444 | gap 1, overlap 3380955 3380953 GTTGGTCGCAGGCGG CGCGGGCGCGGGC CGT GCCCGC-CGCGTG TTTCGCCGCCCGTCG TERM 3560 3382104 - 3382077 - g 79 -6.2 -4.62069 | gap 1, overlap 3382078 GTGGGATCCGAAAAA TGCGGCCGAGCTG TAT CACCTCG-CCGCG CGGCTCGACGGACGC Bphy_3014 3381061 - 3382197 + | hypothetical protein TERM 3561 3383146 - 3383130 - g 84 -7.2 -4.78572 | CGTCAATGAAGAAAA CGCAGC GGGCG GCCGCG TGGTCACCGCGCCGA Bphy_3015 3382282 - 3383670 + | L-serine dehydratase 1 TERM 3562 3383801 - 3383831 + G 79 -10.5 -4.19817 | overlap 3383801 ACGGCTCATGGTCGA CGCGCTGCT-GACGC ATG GCGTCGAGC-GCGTG TTTTGCGTGCCTGGC TERM 3563 3383801 - 3383829 + G 80 -11.8 -3.6993 | gap 2, overlap 3383801 ACGGCTCATGGTCGA CGCGCTGCTGACGC ATG GCGTC-G-AGCGCG TGTTTTGCGTGCCTG Bphy_3016 3383745 - 3385445 + | thiamine pyrophosphate binding domain-containing protein TERM 3564 3385660 - 3385633 - T 100 -12 -5.47846 | AAGCAAAAAACAAAA GCCTCGCAGAGC AAAA ACCCTACGAGGC TTCCACAAAATCAGC Bphy_3017 3386869 - 3385721 - | extracellular ligand-binding receptor TERM 3565 3386896 - 3386928 + r 81 -4.1 -5.09895 | gap 2, overlap 3386897 GGTACCAGGTGTGGA CGGCGCGGTGATCGG GGTCG CCG-TC-TCGCGCCA TTTTTTGAATCGATC Bphy_3018 3390919 - 3386957 - | delta-1-pyrroline-5-carboxylate dehydrogenase TERM 3566 3391027 - 3390997 - H 100 -10.4 -5.06414 | CCCTCCCAATAAAAA GGTGCAACCAGTTC GGC GAGACGGTTGCACC CCTCTGAAAGCCTTA Bphy_3019 3391227 - 3391385 + | hypothetical protein Bphy_3020 3391680 - 3391441 - | hypothetical protein Bphy_3021 3393098 - 3391677 - | hypothetical protein Bphy_3022 3395538 - 3393280 - | primosomal protein N' Bphy_3023 3397116 - 3395980 - | uroporphyrinogen decarboxylase TERM 3567 3396899 - 3396864 - G 75 -3.9 -4.61482 | gap 1, opp_overlap 3396884, overlap 3396865 3396866 TGTCGGAAAAAAGAA TGGCGGCG-TCGAGCG GATAG CGCTCGAGCGGCTGCA GCGTAACTTCCGTCG TERM 3568 3397835 - 3397856 + G 71 -10.1 -3.61398 | opp_overlap 3397834 AAAGGCCGACGTAAT GGTCACGGA CGCG TCCGAGACC TTGTTGCAGCAAAAG TERM 3569 3397946 - 3397929 - g 72 -8.3 -4.07124 | opp_overlap 3397941 CAGTATGGAGAGAAA GCGTGGC TGGT GCCGCGC GGCGATGTGGTATTC Bphy_3024 3397260 - 3398042 + | arogenate dehydratase TERM 3570 3398427 - 3398399 - T 74 -2.3 -5.00616 | gap 1, opp_overlap 3398383, overlap 3398400 3398401 CGCGTGCGCAAAAAA TCCCGCCGCGCC TTATCT GGCG-GGCGTTA CAACCTGAAACACTT TERM 3571 3398618 - 3398643 + T 79 -6.8 -4.57569 | TTCCTCCAATGGTCT CCTCGCGCTA ACCCCG TAGCGTGTGG TTTTTAGCGGGCTCC TERM 3572 3398650 - 3398666 + T 100 -11.5 -6.35605 | AGCGTGTGGTTTTTA GCGGGCT CCA GGCCCGC TTTTTTTTTGTCTTG TERM 3573 3398745 - 3398767 + T 100 -14.9 -4.93696 | opp_overlap 3398725 3398745 CGCCTGAAAGCGAAA CGCCGTGTG GCCTG CACACGGCG TTTTTGGTGTTTGCG TERM 3574 3398767 - 3398745 - T 100 -14.9 -3.84451 | opp_overlap 3398745, overlap 3398725 CGCCTGAAAGCGAAA CGCCGTGTG GCCTG CACACGGCG TTTTTGGTGTTTGCG TERM 3575 3398798 - 3398808 + T 70 -2.4 -4.76274 | GCCGAGATCCGTGCC CCGC TAC GCCG TTTTGTCTTCCTTTA Bphy_3025 3400531 - 3398801 - | AMP-dependent synthetase and ligase TERM 3576 3400701 - 3400717 + r 75 -9.4 -3.82083 | opp_overlap 3400701 AATCGGCAAAAAAAA GCAGCC ACGAG GGCTGC TTTCGATTGTGCTGC TERM 3577 3400717 - 3400701 - R 100 -9.4 -5.77853 | opp_overlap 3400701 AATCGGCAAAAAAAA GCAGCC ACGAG GGCTGC TTTCGATTGTGCTGC Bphy_3026 3401158 - 3400733 - | ATP synthase F1, epsilon subunit Bphy_3027 3402704 - 3401310 - | ATP synthase F1, beta subunit Bphy_3028 3403682 - 3402795 - | ATP synthase F1, gamma subunit Bphy_3029 3405314 - 3403773 - | ATP synthase F1, alpha subunit Bphy_3030 3405912 - 3405373 - | ATP synthase F1, delta subunit Bphy_3031 3406385 - 3405915 - | ATP synthase F0, B subunit TERM 3578 3406002 - 3406041 + g 77 -12 -3.64599 | gap 1 TTCGGCACCCTTCAC GGCGAGCGCGGCGACTTCG CCA CGCAG-CGCTTCGCGCGCC TTTACGATCTGCTGG Bphy_3032 3406793 - 3406524 - | ATP synthase F0, C subunit Bphy_3033 3407731 - 3406880 - | ATP synthase F0, A subunit Bphy_3034 3408423 - 3407878 - | ATP synthase I chain TERM 3579 3408748 - 3408712 - R 70 -3.6 -4.63542 | gap 1, overlap 3408717 CACAAGTGTCAAAAA TGCAACAGCAACCACGC GCCG GCGAGGCCGCTGACG-A CCCAAAACGGGATCG TERM 3580 3408744 - 3408717 - R 73 -11.2 -3.45031 | overlap 3408712 GTGTCAAAAATGCAA CAGCAACCACGC GCCG GCGAGGCCGCTG ACGACCCAAAACGGG Bphy_3035 3409853 - 3408705 - | citrate transporter Bphy_3036 3410798 - 3409866 - | parB-like partition protein TERM 3581 3410451 - 3410507 + g 79 -7.1 -4.56597 | gap 1, opp_overlap 3410461 3410482, overlap 3410452 CAGTACAGGCACTTC GTCGAGACCAGC-CAGGCGCGCCGCG CGAAAA CGCCGCTCGCCAGCGATGATCTCGAA TTTTTCAGGCGACAC Bphy_3037 3411565 - 3410795 - | cobyrinic acid ac-diamide synthase TERM 3582 3411532 - 3411555 + g 72 -3.2 -4.69464 | gap 1, overlap 3411533 TTTTGCCGACTCCAC CCTTCTG-GTT CGC AACGCAGAAGA TTTTTGCCATCTTTT Bphy_3038 3412292 - 3411615 - | methyltransferase GidB Bphy_3039 3414247 - 3412289 - | glucose inhibited division protein A TERM 3583 3413803 - 3413777 - G 70 -10.9 -3.33696 | gap 1, overlap 3413794 CTTCCCGTCAAGGAA CGTGCCGGCCGT CAAA ACGAC-GGCACG CGAGCGAAAACGGAC TERM 3584 3414354 - 3414381 + r 82 -14.2 -2.90496 | opp_overlap 3414355 3414376, overlap 3414351 CGGCATAAAAAAAAA ACGGCGTGTTTC ACGT GAAACACGCCGC TCATTTGACAGCGAA TERM 3585 3414380 - 3414355 - R 100 -17.7 -6.48081 | opp_overlap 3414354 3414351, overlap 3414376 GGCATAAAAAAAAAA CGGCGTGTTTC ACGT GAAACACGCCG CTCATTTGACAGCGA Bphy_3040 3415178 - 3414417 - | ABC transporter related Bphy_3041 3416962 - 3415178 - | ABC transporter related Bphy_3042 3418022 - 3416967 - | inner-membrane translocator TERM 3586 3418150 - 3418118 - R 93 -8.4 -4.74013 | gap 1, opp_overlap 3418144, overlap 3418121 CCGAAACACATAAAA CAACTGCCGCGCC CAAGATAC GGCGCGGCAGA-G CTTGCCATTGTTATC TERM 3587 3418148 - 3418121 - R 100 -15.6 -4.45187 | opp_overlap 3418144, overlap 3418118 AAACACATAAAACAA CTGCCGCGCC CAAGATAC GGCGCGGCAG AGCTTGCCATTGTTA Bphy_3043 3419404 - 3418244 - | extracellular ligand-binding receptor TERM 3588 3419611 - 3419631 + r 75 -5.4 -4.614 | opp_overlap 3419611, overlap 3419606 CGTGCAATAAAAAAA GACGCG TCAGCTGCC CGCGTC TTTTGTCTGGTTCGA TERM 3589 3419631 - 3419611 - R 100 -5.4 -5.7946 | opp_overlap 3419611 3419606 CGTGCAATAAAAAAA GACGCG TCAGCTGCC CGCGTC TTTTGTCTGGTTCGA TERM 3590 3420898 - 3420881 - R 81 -12.7 -3.54424 | TTGGAGTCTTCGAAA GCCGACC CAAT GGTCGGC GAATGGCGAGTGTAG TERM 3591 3421100 - 3421074 - R 100 -14.5 -5.1417 | opp_overlap 3421074 GCAGAAAAGTAAAAA GCGCTGCTGGA GCCAG TCCAACAGCGC TTTTGTATGGGCACT TERM 3592 3421074 - 3421100 + r 100 -12.3 -4.52857 | opp_overlap 3421074 GCAGAAAAGTAAAAA GCGCTGCTGGA GCCAG TCCAACAGCGC TTTTGTATGGGCACT Bphy_3045 3422304 - 3421333 - | inner-membrane translocator Bphy_3046 3423188 - 3422304 - | inner-membrane translocator TERM 3593 3423258 - 3423211 - R 100 -15 -3.84451 | overlap 3423193 GTCGTCAAAGTGAAA GCG-GCATGCACGTGTCAGGCC GGCGAT GGCCCGACACGTCCA-GCACGC AGAACATCGACGCCC Bphy_3047 3424533 - 3423319 - | extracellular ligand-binding receptor TERM 3594 3424127 - 3424148 + g 74 -14.5 -2.6381 | TGCTCGTTGGTGAGC GTATCGGCG CCTG CGCCGATAC TGATGTAGACCTTGT Bphy_3048 3425349 - 3424594 - | ABC transporter related Bphy_3049 3426137 - 3425346 - | ABC transporter related TERM 3595 3425519 - 3425540 + g 89 -5.1 -5.14563 | gap 1, overlap 3425522 TGTGTTCGACCATCA GGATCGTGCG GCC CGC-CGATAC TTTTTTGATCAGCGC Bphy_3050 3428064 - 3426370 - | glucose-methanol-choline oxidoreductase Bphy_3052 3429851 - 3430750 + | LysR family transcriptional regulator Bphy_3053 3431030 - 3431560 + | adenylate cyclase Bphy_3054 3432070 - 3431579 - | AsnC family transcriptional regulator Bphy_3055 3432195 - 3432446 + | transcriptional coactivator/pterin dehydratase Bphy_3056 3432801 - 3432544 - | hypothetical protein Bphy_3057 3432892 - 3433578 + | two component transcriptional regulator TERM 3596 3433624 - 3433666 + F 100 -23.5 -2.90075 | gap 1, overlap 3433626 GTCCGGGTTGTCCGA CGGGCGGCCGCAAGCGCATC CGCG GATGCGCG-GCGGCCGCCTG TGTCATTCAACCCGG TERM 3597 3433626 - 3433664 + F 100 -22.5 -3.00298 | gap 1, overlap 3433624 CCGGGTTGTCCGACG GGCGGCCGCAAGCGCATC CGCG GATGCGCG-GCGGCCGCC TGTGTCATTCAACCC TERM 3598 3433801 - 3433775 - g 79 -15.1 -3.01791 | opp_overlap 3433764 ATCCCGCCGCGAATA GCCTGCGCCGC CAGCT GCTGCGCAGGC TCGCCGCTCCCCTTT TERM 3599 3434899 - 3434866 - g 77 -11.8 -3.56099 | gap 1, overlap 3434868 GATAACGCGCTGAAA TACGTGCCGCCGTCG CGTAT CAACGGCG-CACGCA TCACGATGACGGTCG TERM 3600 3434897 - 3434868 - g 73 -12.2 -3.35522 | gap 1, overlap 3434866 TAACGCGCTGAAATA CGTGCCGCCGTCG CGTAT CAACGGCG-CACG CATCACGATGACGGT TERM 3601 3435241 - 3435226 - g 100 -11.8 -6.02919 | opp_overlap 3435222 CGAGAAACAAAAAAA CCGGCG CATG CGCCGG TCGATCTCTGAACTT Bphy_3058 3433753 - 3435252 + | integral membrane sensor signal transduction histidine kinase Bphy_3059 3435788 - 3435306 - | nuclear protein SET TERM 3602 3435917 - 3435895 - R 100 -17.7 -3.83502 | GATGCGGATAGCAAA CGCGGCGCC GTGCT GGCGCCGCG TCGACACGTGACGCA Bphy_3060 3437182 - 3436052 - | NADH:flavin oxidoreductase/NADH oxidase Bphy_3061 3438006 - 3437275 - | MOSC domain-containing protein Bphy_3062 3438729 - 3438016 - | glutamine amidotransferase class-I TERM 3603 3438814 - 3438866 + r 83 -13.4 -3.54424 | gap 1, opp_overlap 3438808, overlap 3438815 TGCGCAAGACGGCGC AAGCTCA-CCTGCTGCCGTTCGCGA GTGT TCGCGAGCGGCAGCAGGCTCCGCAG TTTAGCCGACTCAGG TERM 3604 3438815 - 3438865 + r 87 -16.9 -2.72511 | gap 1, opp_overlap 3438808, overlap 3438814 GCGCAAGACGGCGCA AGCTCA-CCTGCTGCCGTTCGCGA GTGT TCGCGAGCGGCAGCAGGCTCCGCA GTTTAGCCGACTCAG TERM 3605 3438895 - 3438907 + r 78 -4.1 -4.87665 | GGCTTGCTGCGCGAA GATCT TCC AGGTC TTTTTCTGCGTGGCC Bphy_3063 3439521 - 3438877 - | MarR family transcriptional regulator TERM 3606 3439135 - 3439191 + g 71 -8 -4.08767 | overlap 3439136 GAAAATCGATTGCTC TTCGTCGCGCAGGGTGCC-GACTGCTTT CGC AAGGAAGTCCGGC-CATTGCGCGGCGCG TTTTGCAGCCGTGCG TERM 3607 3440117 - 3440103 - R 100 -8.5 -5.80003 | opp_overlap 3440103 CGAAGAAATAAAAAA CCCGC AAGAA GCGGG TTCAGTCGAGGTTTG Bphy_3064 3441306 - 3440191 - | glutamate--cysteine ligase GCS2 TERM 3608 3441421 - 3441444 + r 73 -11.7 -3.09452 | overlap 3441442 ACAACCTGAGCGCTG TCGGGCCGA AACGTG TCGGCCCGG TGTCTCTTCGCCGCT Bphy_3065 3442662 - 3441460 - | sodium/hydrogen exchanger TERM 3609 3443495 - 3443520 + r 72 -6.1 -4.37886 | CCCGCAATTTGCCCG GTTATCCCCAG CACG CCGTGGATAAC TTTTCTACAGGCTCG Bphy_3066 3445506 - 3443539 - | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC TERM 3610 3443880 - 3443920 + g 88 -11.7 -4.2349 | opp_overlap 3443861 3443862 CATGCACGTTGAACG CGTCGCGCATGTCGGGCAG CAT CTGCGCGACCCGCTCGATG TTTTCGATGTGCGCG TERM 3611 3444174 - 3444184 + g 77 -8.2 -4.25104 | opp_overlap 3444156 CGGGTGCACTCACCA CGGC GGC GCCG TTTTCGTCGAACACA TERM 3612 3444572 - 3444550 - G 81 -5.4 -4.8543 | opp_overlap 3444565 CAACGCGTACAAAAA GCCTGCGCGT GTG ATGCGCGAGC CGACGCTGTCGTCGC TERM 3613 3445025 - 3445012 - G 71 -4.5 -4.55287 | opp_overlap 3445022, overlap 3445013 3445014 GCCATCCAGATAAAA CGCGT CGGC ACGCA GCCAGAGCGTGGGCA Bphy_3067 3445975 - 3446253 + | histone family protein DNA-binding protein TERM 3614 3446279 - 3446293 + T 100 -12.8 -5.90981 | CTTGAGTTGTTGACA CCCGCC GTT GGCGGG TTTTTTTTCGTCTGC Bphy_3068 3447607 - 3446348 - | cobalamin synthesis protein P47K Bphy_3069 3448188 - 3447745 - | lytic transglycosylase catalytic TERM 3615 3448292 - 3448280 - H 80 -10.5 -4.07568 | CTCCCCCCGGGAAAA CCCGC TAC GCGGG GGATATTCGAACTGT TERM 3616 3448920 - 3448949 + G 81 -9.3 -4.21194 | gap 1, opp_overlap 3448921, overlap 3448921 GATCAGGCGCTGAAG ACCTTGCAGTCCGC ACT GCGGA-TGCAGGGC TTTTCGCTCGTGCAG TERM 3617 3448921 - 3448948 + G 72 -12.8 -3.12395 | gap 1, opp_overlap 3448921, overlap 3448920 ATCAGGCGCTGAAGA CCTTGCAGTCCGC ACT GCGGA-TGCAGGG CTTTTCGCTCGTGCA Bphy_3070 3448683 - 3451046 + | general secretion pathway protein D TERM 3618 3451209 - 3451191 - g 79 -10.2 -4.09864 | ACGGATTCGCGAAAA GCGGCCAG ATC CTGGTCGC GCATCAGCACGCCGA TERM 3619 3451811 - 3451799 - g 86 -9.1 -4.56597 | CGTCTGCTGGAAAAA GACGC GCA GCGTC TGAATCTCGAAGCGC Bphy_3071 3451043 - 3452590 + | general secretory pathway protein E TERM 3620 3453557 - 3453515 - g 78 -12.7 -3.50393 | gap 1, overlap 3453518 3453550 CGCGATGCGAGACAA CATCGACGATGCCATCGTGC GCGT GCGCGAAGGCA-CGTCGCTG TCGCGTGCGCTCGGC Bphy_3072 3452595 - 3453812 + | general secretion pathway protein F Bphy_3073 3454329 - 3453907 - | putative general secretory pathway protein C Bphy_3074 3454490 - 3454966 + | general secretion pathway protein G TERM 3621 3455061 - 3455085 + G 72 -13.5 -3.05384 | opp_overlap 3455059 3455061 GTGCGTTTCACAAGA CCGTCAGCGTC GAT GACGCGGGCGG TTGCGTGAGCCGGCG TERM 3622 3455338 - 3455353 + G 72 -8.2 -4.09556 | CCCTATTTCATGGTT GCCGCT CGAC GGCGGC TTTCGTTTCGATATC Bphy_3075 3455021 - 3455596 + | general secretion pathway protein H Bphy_3076 3455596 - 3456027 + | general secretion pathway protein I TERM 3623 3456677 - 3456689 + G 86 -6.9 -4.91109 | overlap 3456672 AATTCGCTCGCGCGG CCCGT GAC GCGGG TTTTTCTCGTGGGAG Bphy_3077 3456005 - 3456709 + | putative general secretory pathway protein J TERM 3624 3457421 - 3457387 - g 72 -7.1 -4.26076 | opp_overlap 3457387 3457382 3457389, overlap 3457413 GGACGCCGACGAAAA CG-CGCCCGTCGCACCG CTC CAG-ATGACGGGCGTCG ATTCCTTGCTGGACG Bphy_3078 3456719 - 3457822 + | general secretion pathway protein K TERM 3625 3457909 - 3457927 + G 84 -8.9 -4.4891 | opp_overlap 3457908, overlap 3457885 TGCCGTCGCAGGAAT GGCAACT GCCGG AGTTGCC TTTTCTGCTGCTCGA TERM 3626 3458232 - 3458276 + G 70 -11.5 -3.34398 | overlap 3458231 3458231 GTCCTCGAGACGTTC GCG-GCGGCGGGCCATCGC AATGTGAAG GCGGTG-CCCGTCGCGCGC TGTTTGCCGCAGCCG TERM 3627 3458991 - 3459016 + G 71 -4.5 -4.55287 | overlap 3458992 CAACAGTTGCGCGTG GCGGCGGGCGA ACTG TCGCCGGACGA TTTTCTGTCGCTCGC Bphy_3079 3457851 - 3459230 + | general secretion pathway protein L Bphy_3080 3459227 - 3459730 + | general secretion pathway M protein TERM 3628 3460090 - 3460142 + G 100 -22.8 -3.14344 | gap 1 CTGTCTTTGTCGATG CGACGCTGCGCAGCGCGACGCTGTC GGGC GGCAGCATCGCGGTGC-CGGCGTCG TTGCTCGCGGGCCTC TERM 3629 3460450 - 3460407 - g 76 -13.8 -3.06183 | gap 1 GGCACGGTCAGCGAA GCGTC-GACGTCGTTCACGGG CAT CGCGAGCACGACGCCCGACGC CGTCGACAATCTCGC Bphy_3081 3459753 - 3460532 + | type II secretion system protein N TERM 3630 3460591 - 3460554 - T 100 -15.6 -4.07568 | opp_overlap 3460559, overlap 3460559 CGGGCCGCTCCAAAA CACGACGGCCGCCATG TTTGCG CATGGCGGCCGTTTTG CGTCGCGCGGATAAC TERM 3631 3460586 - 3460559 - T 100 -18.5 -2.93623 | opp_overlap 3460559, overlap 3460554 CGCTCCAAAACACGA CGGCCGCCATG TTTGCG CATGGCGGCCG TTTTGCGTCGCGCGG TERM 3632 3460559 - 3460586 + T 100 -19.2 -4.18018 | opp_overlap 3460559 3460554 CGCTCCAAAACACGA CGGCCGCCATGT TTGC GCATGGCGGCCG TTTTGCGTCGCGCGG Bphy_3082 3462225 - 3460615 - | RND efflux system outer membrane lipoprotein Bphy_3083 3462687 - 3462418 - | hypothetical protein TERM 3633 3462469 - 3462453 - G 100 -15.1 -4.56607 | opp_overlap 3462465 CGAGGAAGCACAAAA GCCGCCC GCT GGGCGGC TTGCGCGGCGACGCA TERM 3634 3462739 - 3462701 - R 100 -15.2 -5.05228 | overlap 3462703 ACGAAAGCACAAAAA GGCGCGGCGGCGTCAATG GGT CACCGACGCCGCCACTTC CGGTACTTCAACGAA TERM 3635 3462737 - 3462703 - R 86 -16.4 -2.75822 | overlap 3462701 GAAAGCACAAAAAGG CGCGGCGGCGTCAATG GGT CACCGACGCCGCCACT TCCGGTACTTCAACG Bphy_3084 3463487 - 3462759 - | OmpA/MotB domain-containing protein TERM 3636 3462802 - 3462814 + g 91 -10.5 -4.63218 | CGCCGGTTCTTCGCG CGGCC AAT GGCCG TTTTGTTCGGCGCAA Bphy_3085 3464069 - 3463593 - | hypothetical protein TERM 3637 3464260 - 3464241 - R 100 -10.7 -5.14563 | opp_overlap 3464241 CGCGCCACGAAAAAA GGGCAGC GTGAAA GCTGCCC TTTCGCCATTCGTCG TERM 3638 3464241 - 3464260 + r 71 -10.7 -3.61764 | opp_overlap 3464241 CGCGCCACGAAAAAA GGGCAGC GTGAAA GCTGCCC TTTCGCCATTCGTCG Bphy_3086 3465951 - 3464308 - | glutamate--cysteine ligase TERM 3639 3464866 - 3464849 - G 83 -9.1 -4.3739 | gap 1, opp_overlap 3464838 3464859, overlap 3464837 TATGCGTCGAGAAAA CGCGC-CG TTT CGAGCGCG ATGCCCGTCGGTTCG TERM 3640 3464989 - 3465001 + g 75 -7.7 -4.2349 | CTTCGGGCGGATCGT CGAGT AAA ACTCG TTTTCGATCTGCAGC TERM 3641 3465368 - 3465387 + g 70 -7.8 -3.96624 | opp_overlap 3465352 3465368 CGATCGGACTGGAAA TCGACCGC ATTG GCCGTCGA TTTCTGGTCGGCGTG TERM 3642 3465857 - 3465827 - G 75 -12.4 -3.53811 | TCGATGCCGCGCAAA CCGGCTGCCAGCGC GTC GCGCTGCGGGCCGG ATGTCAGCACGGACA Bphy_3087 3467094 - 3466171 - | alcohol dehydrogenase Bphy_3088 3468221 - 3467091 - | AraC family transcriptional regulator TERM 3643 3468377 - 3468394 + H 74 -7 -4.27316 | opp_overlap 3468377 TAGCGGGAGAATTGA CCCCAA AAAAAG TTGGGG TTTTCCCTTAAAAAA TERM 3644 3468482 - 3468503 + H 100 -13 -5.91981 | CCTGATATGGATTCA GCCCGCTC CACGTC GAGCGGGC TTTTTTTTGCCTTTT TERM 3645 3468913 - 3468874 - g 78 -12.8 -3.53811 | gap 1, opp_overlap 3468898 3468899 3468901, overlap 3468911 CTGATGCGCTCGAAA GCTGGCTCGCCG-CGCGCA ATG TGCGCATCGGCGAACAGGC GACACGCTATGGTGC Bphy_3089 3468600 - 3469013 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_3090 3469703 - 3469062 - | YaeQ family protein TERM 3646 3470064 - 3470032 - R 74 -8.3 -4.15632 | overlap 3470036 3470037 ATGATCAGACAGAAA TGAAGTGGCCGGACT AAG AGTCCGGCCAGCGCG AACCGATAAAGCGCA TERM 3647 3470060 - 3470036 - R 95 -14.3 -3.67481 | overlap 3470032 3470037 TCAGACAGAAATGAA GTGGCCGGACT AAG AGTCCGGCCAG CGCGAACCGATAAAG TERM 3648 3470059 - 3470037 - R 89 -17.8 -2.79766 | overlap 3470036 3470032 CAGACAGAAATGAAG TGGCCGGACT AAG AGTCCGGCCA GCGCGAACCGATAAA Bphy_3091 3470497 - 3470156 - | hypothetical protein TERM 3649 3470509 - 3470523 + H 80 -9.2 -4.15664 | TCATGGTATCTCCGT GCGGGC ATT GCTCGC TTTATCTATGCGTTT Bphy_3092 3471041 - 3471667 + | lysine exporter protein LysE/YggA Bphy_3093 3471812 - 3471979 + | hypothetical protein Bphy_3094 3472422 - 3472718 + | hypothetical protein Bphy_3095 3474125 - 3472947 - | integrase family protein Bphy_3096 3475637 - 3474237 - | tRNA modification GTPase TrmE TERM 3650 3476021 - 3476008 - g 82 -3.7 -5.06816 | overlap 3476009 ACCGTCGAAGAAAAA GCGGC CTTT GCCGA GCGACTCAAGTTCGC TERM 3651 3476070 - 3476044 - g 73 -13.6 -2.78715 | opp_overlap 3476032, overlap 3476031 AAGTTCGCGATGAGA CGCGCCCCGGAG AAA CTCAGGGGCGGG ACCGACCTCGCATTG Bphy_3097 3475987 - 3476409 + | hypothetical protein TERM 3652 3476428 - 3476459 + T 90 -10.1 -4.59773 | opp_overlap 3476433, overlap 3476433 AATCGCAAGACGTAA AAAAACCGCCCGG CTGAAA CCGGGCGGTTTGC TTTTTCGGCATCGGC TERM 3653 3476454 - 3476433 - T 100 -15.1 -5.52909 | opp_overlap 3476428 3476433 CAAGACGTAAAAAAA CCGCCCGGC TGAA ACCGGGCGG TTTGCTTTTTCGGCA TERM 3654 3476433 - 3476454 + T 100 -14.4 -4.32046 | opp_overlap 3476433, overlap 3476428 CAAGACGTAAAAAAA CCGCCCGG CTGAAA CCGGGCGG TTTGCTTTTTCGGCA Bphy_3098 3478160 - 3476508 - | 60 kDa inner membrane insertion protein TERM 3655 3476950 - 3476977 + g 78 -10.5 -3.95584 | TCGCTCTTGAAGCGT TCGCGCAGCGC CTGCAT GCGCGGCGTGA TTTCCTTCATGCGGG TERM 3656 3478022 - 3478036 + g 74 -12.8 -3.20573 | overlap 3478021 TCGACGAGCCGGGCG CGGCGG GAG CCGCCG TCTTGGTCTGCGTCG Bphy_3099 3478421 - 3478191 - | hypothetical protein TERM 3657 3478362 - 3478348 - G 86 -7.1 -4.88736 | opp_overlap 3478355 CAGGAGGGATAAAAA CGGCA CCGAT TGCCG AGCATGGGACTCACG Bphy_3100 3479004 - 3478495 - | ribonuclease P protein component TERM 3658 3478896 - 3478865 - G 78 -13.2 -3.54424 | opp_overlap 3478872, overlap 3478872 CGCCACGGGCGCAAA CGAAAAACGGATGA AAAT TCATCCGTTTTTAG CAGCCTTGCGGCTTT TERM 3659 3478889 - 3478872 - G 100 -9.9 -4.98531 | opp_overlap 3478872, overlap 3478865 GGCGCAAACGAAAAA CGGATGA AAAT TCATCCG TTTTTAGCAGCCTTG TERM 3660 3478872 - 3478889 + g 86 -9.9 -4.58283 | opp_overlap 3478872 3478865 GGCGCAAACGAAAAA CGGATGA AAAT TCATCCG TTTTTAGCAGCCTTG Bphy_3101 3479164 - 3479030 - | ribosomal protein L34 SEQUENCE gi|186471973|ref|NC_010623.1| Burkholderia phymatum STM815 chromosome 2, complete sequence (length 2697374) Bphy_3102 624 - 28 - | putative lipoprotein Bphy_3103 1435 - 737 - | hypothetical protein Bphy_3104 1620 - 2570 + | putative PTS IIA-like nitrogen-regulatory protein PtsN Bphy_3105 3207 - 2614 - | hypothetical protein Bphy_3106 3387 - 3707 + | hypothetical protein Bphy_3107 3747 - 3965 + | FmdB family regulatory protein TERM 1 4959 - 5011 + G 75 -4.2 -4.63932 | gap 3, overlap 4960 CTGTCCACGCATGAC GTCAC-CGCG-TGCGCTGCGGCC ATGCGCTAGC GGCAGC-GCGCATCGCGAGTGAA TTTTCTTCACCCGTC Bphy_3108 4050 - 4988 + | LysR family transcriptional regulator TERM 2 5206 - 5224 + G 83 -9.5 -4.34402 | overlap 5196 5198 CATCCGGCAGACCTT CGGCCTG TTCAT CGGGCCG TTTTCGTATGACCGC TERM 3 5305 - 5356 + G 93 -17.2 -3.53012 | gap 1 GTGGGGTTTCGCGCA GCCGTTCGCGGGCGCCGCTGCCG ACCGCTA CGGC-GCGGCGCCTGTGGTCGCC TTTGGCGCGACCACG Bphy_3109 5093 - 6337 + | major facilitator transporter TERM 4 6377 - 6398 + T 100 -17.3 -4.12857 | TTGGTAGCGGCATTT GCGGACGGC TCGC GCCGTCCGC TTCTTTCTCGTGCTT Bphy_3110 7117 - 6443 - | two component transcriptional regulator Bphy_3111 8647 - 7319 - | integral membrane sensor signal transduction histidine kinase TERM 5 8811 - 8845 + r 75 -10.7 -3.70149 | gap 1, opp_overlap 8809 8806, overlap 8813 8814 GGTTGCAAAAGCATG GATCGGCACGCGCAGA TTTC TCTGCGCGT-CCGCGC TTTCCATCGTGTGCA TERM 6 8814 - 8844 + r 70 -11.9 -2.81768 | gap 1, opp_overlap 8809 8806, overlap 8813 8811 TGCAAAAGCATGGAT CG-GCACGCGCAGA TTTC TCTGCGCGTCCGCG CTTTCCATCGTGTGC Bphy_3112 9189 - 8881 - | hypothetical protein TERM 7 8958 - 8933 - G 77 -8.9 -4.2558 | gap 1, opp_overlap 8944 TATTGGGGATGAAAA GGCGCGCCCGCC TGC GACGTGC-CGCC TGTCACGCCGCCGTA Bphy_3113 9287 - 9535 + | hypothetical protein Bphy_3114 9590 - 9775 + | hypothetical protein Bphy_3115 9835 - 10290 + | hypothetical protein TERM 8 11378 - 11344 - g 72 -12.9 -3.17212 | overlap 11347 GCACTACGCGATCAA CGACTACGG-CGACGCG CAC CGCGTCGTCCGTCG-CG CGACGGTGCACGGCG TERM 9 11376 - 11347 - g 71 -14.3 -2.78547 | gap 1, overlap 11344 CTACGCGATCAACGA CTACGG-CGACGCG CAC CGCGTCGTCCGTCG CGCGACGGTGCACGG Bphy_3116 10511 - 11461 + | taurine dioxygenase Bphy_3117 12611 - 11487 - | heat shock protein DnaJ domain-containing protein TERM 10 12226 - 12198 - G 93 -13.7 -4.18018 | CTTGCGCAGTGAAAA CCCCGCCGCCGCG GGC CTCGACGGCGCGG CACGCGGATCGACGC TERM 11 12688 - 12700 + r 72 -4.7 -4.57341 | opp_overlap 12688 CCGGTCGTGAACCCA GCCGG ATA CCGCC TTTTTGAGCGCCGTT Bphy_3118 13785 - 12787 - | hypothetical protein TERM 12 13550 - 13582 + g 81 -9.7 -4.26076 | opp_overlap 13549 13548, overlap 13551 GGATCGCCATAAATG CCGCCGCGCGCCG AAATGAG CGGCGTGAGGCGC TTTTCATCGCAATAC TERM 13 13551 - 13581 + g 72 -13.2 -3.15324 | opp_overlap 13549 13548, overlap 13550 GATCGCCATAAATGC CGCCGCGCGCCG AAATGAG CGGCGTGAGGCG CTTTTCATCGCAATA Bphy_3119 14484 - 14272 - | hypothetical protein TERM 14 14636 - 14611 - R 70 -11.8 -2.71731 | opp_overlap 14602 14611 14611 GTTACTGTTCAATGA CGGCCGGCGT TGCCGT ACGCCGGCCC GTTGTGTGCGACTTT TERM 15 14611 - 14637 + r 74 -11.6 -3.51161 | gap 1, opp_overlap 14611, overlap 14611 14602 GTTACTGTTCAATGA C-GGCCGGCGT TGCCGT ACGCCGGCCCG TTGTGTGCGACTTTG Bphy_3120 15689 - 14658 - | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 16 15466 - 15481 + g 76 -6 -4.56775 | AGCGGCGCATCGGAA CCGGCG AAAT CGACGG TTTTTGCGAGCACCT Bphy_3121 17373 - 15886 - | transcriptional regulator TERM 17 16110 - 16100 - G 72 -8.2 -3.9749 | overlap 16101 ACCCATAACAGCAAA CCGC CCG GCGG CAGGTTCAGCCGCGT TERM 18 16714 - 16696 - G 85 -8 -4.62302 | opp_overlap 16695, overlap 16697 CAACAGCCCGAAAAA CGCCGGCG ATT CGACGGCA ATCGTGTCGCCCGGC TERM 19 16733 - 16775 + g 73 -11.9 -3.40522 | GTGTCGCCCGGCTGC GCGACGGCG-CGCAGCGCGAG GTT CAC-CGCTTCGACGCCGCCGC TTGTGATGAGGACGT TERM 20 17001 - 16947 - G 77 -14.9 -2.87132 | gap 1, overlap 16994 GCTCCGTCGGATACA GCGC-GGCGCCCGCCGTCGCGCCG CCCAGGTT CAGCGCGTCGGGAAACGCCTGCGC GCGCTCGATCACCCG TERM 21 17163 - 17122 - G 75 -10.8 -3.86897 | opp_overlap 17127, overlap 17125 CGGACGCCGGACAAA GTAGCCGGCGCGC-GGCCGC GCCT GCAGCCAGC-CGCCGTCTTC GAGACGCCGGAACAC TERM 22 17146 - 17125 - G 71 -12.9 -3.01125 | opp_overlap 17127, overlap 17122 ACGCCGGACAAAGTA GCCGGCGCG CGGC CGCGCCTGC AGCCAGCCGCCGTCT TERM 23 17686 - 17635 - g 81 -13.6 -3.55622 | GCGAACTGGTTCAAA CGCGGCAGCGCCATCACCGCGC TGAACGGC GCGCTGCGACTGAGCTACCGCG ACGGCTCCCTCGACT Bphy_3122 17578 - 17919 + | hypothetical protein Bphy_3123 19107 - 17953 - | DNA-directed DNA polymerase TERM 24 18063 - 18020 - G 91 -15.2 -3.91897 | overlap 18021 CTTGCCAGCGACAAA CCGCTGACGCGCACGCCAAG CAGC CGCAGCTTGCGCGTCAGCGC GACGCGCTTCAGACA TERM 25 18062 - 18021 - G 89 -18.7 -2.94924 | overlap 18020 TTGCCAGCGACAAAC CGCTGACGCGCACGCCAAG CAGC CGCAGCTTGCGCGTCAGCG CGACGCGCTTCAGAC Bphy_3124 19576 - 19271 - | hypothetical protein Bphy_3125 19791 - 19573 - | hypothetical protein TERM 26 19823 - 19840 + r 74 -2.7 -4.87786 | overlap 19824 CAATCGCACGCCGAT ACTGTAT ATCC ATACAGG TTTTTGTGCAATTGC TERM 27 19976 - 19944 - R 100 -15.6 -4.25056 | gap 1, opp_overlap 19944 CAGCGGACGAAGAAA CGCCAGGCCGTCGCA ATCT CGCGACG-CCCGGCG TTCAATCGTTGACGG TERM 28 19944 - 19976 + r 76 -12.7 -3.13164 | gap 1, opp_overlap 19944 CAGCGGACGAAGAAA CGCCAGGCCGTCGC AATCTC GCGACGCCC-GGCG TTCAATCGTTGACGG Bphy_3126 21191 - 20007 - | porin Bphy_3127 23700 - 21259 - | glycoside hydrolase family protein Bphy_3128 25031 - 23724 - | major facilitator transporter TERM 29 24345 - 24315 - G 76 -6.1 -4.56597 | gap 1, opp_overlap 24306 24339, overlap 24339 CGGCTCCGCGAAAAA GCG-CGCTTGTGCG ATCG CCCAGAAGCGGCGC GTGCCGAGCACTTCA TERM 30 24339 - 24372 + g 73 -12.4 -3.41051 | gap 1, opp_overlap 24315 24339 TGCGATCGCCCAGAA GCGGCGCGTGCCGAG CACTT CACGG-ATGCGCCGC TTGTCCTGCGCATAA TERM 31 25256 - 25238 - g 71 -4.5 -4.58685 | opp_overlap 25228 25250 AAATCTGCCGAAAAA CGACATG GCTTG CGTGTCG TTCGCGGCATGTTCA Bphy_3129 25068 - 25403 + | hypothetical protein TERM 32 25838 - 25862 + T 100 -11.4 -4.89966 | opp_overlap 25839 25841, overlap 25839 ACCACGTAGCACCGA AGAGCCGTCG CGGAT CGACGGCTCG TTTCTTTTTCACTGT TERM 33 25839 - 25861 + T 88 -14.9 -3.52353 | opp_overlap 25839 25841, overlap 25838 CCACGTAGCACCGAA GAGCCGTCG CGGAT CGACGGCTC GTTTCTTTTTCACTG TERM 34 25861 - 25839 - T 85 -14.9 -3.10164 | opp_overlap 25839 25838, overlap 25841 CCACGTAGCACCGAA GAGCCGTCG CGGAT CGACGGCTC GTTTCTTTTTCACTG TERM 35 25859 - 25841 - T 73 -11.7 -3.10975 | opp_overlap 25839 25838, overlap 25839 ACGTAGCACCGAAGA GCCGTCG CGGAT CGACGGC TCGTTTCTTTTTCAC Bphy_3130 26041 - 25871 - | hypothetical protein TERM 36 26526 - 26508 - g 91 -6.6 -5.07486 | overlap 26510 GATGCCGAAGAAAAA GCTGCCCG TGG CGGACATC GACGGCGTGACGGTG Bphy_3131 26362 - 27120 + | putative glutathione S-transferase Bphy_3132 27262 - 27900 + | lysine exporter protein LysE/YggA Bphy_3133 28852 - 27908 - | hypothetical protein Bphy_3134 31275 - 28957 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 37 30972 - 30933 - G 77 -12.1 -3.56325 | gap 1, overlap 30934 CCTCGACAATCACAA GGCGCCGG-TCGTGCATC GCCGT GCCGCACGAGCCGGCGCA TGGACCCAAGCGCAT TERM 38 30971 - 30934 - G 78 -15.6 -2.73474 | gap 1, overlap 30933 CTCGACAATCACAAG GCGCCGG-TCGTGCATC GCCGT GCCGCACGAGCCGGCGC ATGGACCCAAGCGCA Bphy_3135 32200 - 31367 - | hypothetical protein TERM 39 31521 - 31493 - G 85 -12.4 -4.08571 | gap 1, opp_overlap 31486 CGACAACACGAGAAA CGCGTCTTCGCCG ACCG CGGCG-AGGCGCG GATCGTCGGGGTACA TERM 40 32267 - 32223 - R 73 -2.8 -4.72272 | gap 2, opp_overlap 32229 32234 32248, overlap 32250 32253 CTCCTCGATGAAAAA CATCTATGCACGCGCCGCTTTG AAA CACAGCG-CG-GCGCTCAGTTG TTTAGGCGCCCGGCC Bphy_3136 32932 - 32261 - | multiple antibiotic resistance (MarC)-related protein Bphy_3137 33246 - 33458 + | hypothetical protein Bphy_3138 33455 - 34933 + | Na+/solute symporter TERM 41 34944 - 34964 + T 91 -8.1 -5.04325 | overlap 34949 ATTAGCGTTTTTGTT CGTCTGCGC GAC GCGCTGTCG TTTTTGTGATTTGCC TERM 42 34991 - 35004 + T 93 -9.5 -4.81212 | TGCCTCGTGGCGCGT CGCGG GCAT CCGCG TTTTGTTGTCCTGCC Bphy_3139 35787 - 35056 - | precorrin-4 C11-methyltransferase Bphy_3140 36521 - 35784 - | precorrin-6x reductase Bphy_3141 37618 - 36518 - | cobalamin biosynthesis protein CbiD TERM 43 37076 - 37052 - G 70 -5 -4.4261 | overlap 37054 TGCTGAACACGAAAA CGGC-CGCACGA TGC CCGT-CGTGCCG AGTATCGACAATCCG TERM 44 37349 - 37314 - G 76 -9.6 -4.07568 | gap 1 GGGCCCGCGTGAAAA CGCACGCCGGGCGCGTC GGC AAGGCGCAC-GCGCGCG AACACGATCGCGCCA Bphy_3142 38823 - 37618 - | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit TERM 45 38722 - 38690 - G 75 -12 -3.53811 | gap 1, overlap 38692 CGCACGGCGTTCAAA CAGGCGGGCAGCATC GACA GATGCCGCTCGCC-G CCATAGATCACCGAT TERM 46 38721 - 38692 - G 88 -15.7 -3.34715 | overlap 38690 CACGGCGTTCAAACA GGCGGGCAGCATC GACA GATGCCGCTCGCC GCCATAGATCACCGA TERM 47 38891 - 38857 - H 87 -7.7 -4.7497 | opp_overlap 38857 38886 TTGATGTACTAAAAA CGCTGCGGCAGCCGT GTTCA AAGGCCGCGGCATCG TTGTGCTGTTCGAAA TERM 48 38920 - 38910 - H 76 -3.2 -5.00616 | TGCTGTTCGAAAAAA GGCA TAA TACC CGTTCGCCGGTGCCT Bphy_3143 39178 - 40575 + | precorrin-3B synthase Bphy_3144 40556 - 41194 + | precorrin-8X methylmutase TERM 49 41742 - 41728 - g 74 -12.8 -3.23979 | overlap 41723 CGAAGACGAACTCAA GCGGCG TCT CGCCGC TGCCGACGCCGCCGT Bphy_3145 41195 - 41950 + | precorrin-2 C20-methyltransferase TERM 50 43220 - 43189 - g 85 -16.6 -3.14881 | gap 1 GAAGCGCTCGACGAA GCCCATGCCGACGCG CAC CGCG-CGGCATGGTC CGCCGTCGAACTCGA Bphy_3146 41947 - 43665 + | precorrin-3B C17-methyltransferase TERM 51 43851 - 43874 + G 73 -13.8 -2.87564 | opp_overlap 43845 43843 43841, overlap 43854 GTGAAGACACCGTCC AGACGGGCGC AAGC GCGCCCGTCC TGTCTCGGCAGCTCG TERM 52 43854 - 43871 + G 71 -14.1 -2.69151 | opp_overlap 43845 43843 43841, overlap 43851 AAGACACCGTCCAGA CGGGCGC AAGC GCGCCCG TCCTGTCTCGGCAGC Bphy_3147 43826 - 44779 + | type IV pilus assembly PilZ TERM 53 44819 - 44847 + T 100 -21.1 -3.80625 | opp_overlap 44819 CCGTCAATGGAAAAA CGGCCTGGTCATC CAC GATGACCGGGCCG TTTGCGTTGTGGGCC TERM 54 44847 - 44819 - T 100 -18.9 -4.74103 | opp_overlap 44819 CCGTCAATGGAAAAA CGGCCTGGTCATC CAC GATGACCGGGCCG TTTGCGTTGTGGGCC Bphy_3148 46019 - 44904 - | OmpA/MotB domain-containing protein TERM 55 45779 - 45762 - G 72 -8.3 -3.96148 | overlap 45730 GTTGTCGATCAGAAA GCGCGCG TTGC CGAGCGC ACGGTTCGCCGCATC Bphy_3149 54677 - 46071 - | hemagluttinin domain-containing protein TERM 56 47453 - 47430 - G 72 -11 -3.53091 | gap 1, opp_overlap 47443 47445 47446, overlap 47431 47443 AGCCGTGCCCGTAAA GTCGACGAGCG AAC CGCCCGTCG-C GGACGCGACGAGGAT TERM 57 47443 - 47469 + g 78 -4.3 -4.77036 | gap 1, opp_overlap 47430 47431 47443, overlap 47445 47446 AAGTCGACGAGCGAA CCGCC-CGTCGC GGAC GCGACGAGGATG TTTTTGCTCGTCGCA TERM 58 50736 - 50760 + g 86 -15.7 -3.21099 | GACGTTCACGGCATC CGTCGCAGCCG AAC CTGCTGCGACG TTGGTGATGCGGCGA TERM 59 51279 - 51255 - G 71 -10.6 -3.64198 | opp_overlap 51273 GGCCGAGATAGAGAA GCCGCCCGGC GCGAA GCCGGCCGAC GACAGCGTAGCCGCG Bphy_3150 55777 - 55130 - | magnesium chelatase subunit ChlD TERM 60 55788 - 55767 - G 77 -12.3 -3.59979 | gap 1, opp_overlap 55756 55768, overlap 55729 TGCCGCCATCGGAAA CCGCTGCGCA TTG TGCGC-GCGG TCGCGCCCTTCCGAT TERM 61 55768 - 55812 + g 100 -3.4 -5.67063 | gap 1, opp_overlap 55729 55767, overlap 55756 GCCGCCATCGGAAAC CGCTGCGC-ATTGTGCGCGCG GTCG CGCCCTTCCGATGGCTCAGCG TTTTTTTGTGCTGAG Bphy_3151 56835 - 55807 - | magnesium chelatase TERM 62 56077 - 56063 - G 71 -9.2 -3.70076 | TCAAATGCAGCCAAA GCGCGC GCC GCACGC AGCATCATGAGGTCG Bphy_3152 60635 - 56832 - | cobaltochelatase, CobN subunit TERM 63 60056 - 60029 - G 70 -11.2 -3.3197 | gap 1, opp_overlap 60024, overlap 60015 ACAGGATCGCGACAA CGGGCGCGCCCGG TGT CCAG-CGCGCCTG CCAGTCTTCGATGGT Bphy_3153 61755 - 60646 - | cobalamin biosynthesis protein CobW TERM 64 61905 - 61848 - H 90 -12 -4.18494 | gap 3, opp_overlap 61886, overlap 61849 61891 TACGGGGACGGAAAA CGGCGCCGCAAGCGC--TTCGCGGCCGCC AGA GGCAAGTGCGAAACGCGCATGCGGCGC-G TGCGGAATCATGAAC TERM 65 61905 - 61849 - H 73 -12.2 -3.10775 | gap 2, opp_overlap 61886, overlap 61848 61891 ACGGGGACGGAAAAC GGCGCCGCAAGCGC--TTCGCGGCCGCC AGA GGCAAGTGCGAAACGCGCATGCGGCGCG TGCGGAATCATGAAC TERM 66 61937 - 61891 - H 74 -11.6 -3.61268 | gap 1, opp_overlap 61886 61916 61918 61920, overlap 61848 61849 61920 GAGGCAAGTGCGAAA CGCGCATGCGGCGCGTGCG GAATCATGAA CGCA-GCGCCGCATCCCCG CAGCGTTGCGTCGTT TERM 67 61916 - 61950 + H 72 -6.4 -4.37092 | gap 1, opp_overlap 61891 61920, overlap 61886 61918 61920 61944 GCGCGTGCGGAATCA TGAACGCAGCGCCGC ATCCCC GCAGCGTTGCG-TCG TTTTCTCGGGCCGGT TERM 68 61947 - 61920 - H 71 -11.2 -3.27298 | opp_overlap 61886 61918 61916 61920 61944, overlap 61891 GTGCGGAATCATGAA CGCAGCGCCGCA TCCC CGCAGCGTTGCG TCGTTTTCTCGGGCC TERM 69 62445 - 62388 - H 75 -10 -3.71649 | gap 3, opp_overlap 62388 62424, overlap 62395 CGGTTAAACGGGAAA CAGG-GAAGCGCCTCATTTGCACGGCACG CGT CGTGC-G-GCGAACGAAGCGCTCAGCCTG TGCTGTCCCCGCAAC TERM 70 62437 - 62395 - H 75 -12.1 -3.24289 | gap 2, opp_overlap 62388 62424, overlap 62388 ACGGGAAACAGGGAA GCGCCTCATTTGCACGGCACG CGT CGTGC-G-GCGAACGAAGCGC TCAGCCTGTGCTGTC Bphy_3154 62775 - 63518 + | uroporphyrin-III C-methyltransferase TERM 71 63883 - 63845 - g 75 -10.8 -3.85698 | overlap 63846 CTGCTCGTGCACAAA CGCGCGCGCGATGGCGTC ACG GTTGCCATCGCATGCGCT GCCGATGCCGGCCGC TERM 72 63882 - 63846 - g 73 -14.3 -2.91276 | overlap 63845 TGCTCGTGCACAAAC GCGCGCGCGATGGCGTC ACG GTTGCCATCGCATGCGC TGCCGATGCCGGCCG Bphy_3155 63515 - 63949 + | cobalamin (vitamin B12) biosynthesis CbiG protein Bphy_3156 63946 - 64548 + | cob(I)alamin adenosyltransferase TERM 73 64909 - 64937 + G 74 -10.9 -3.57144 | opp_overlap 64909, overlap 64925 64926 GTGATCTCGGCGAAA GCGATGGCGCAGA CCT TCGGCGCGGTCGC TTTCGGCCTCGCGCG Bphy_3157 64552 - 65856 + | glutamine amidotransferase TERM 74 66331 - 66389 + G 71 -13.1 -3.01726 | CGAAGTGCGCGCAAT GCTCGGCATGCCGGCAGGCGC-GCGGCCC GTC GCGCTGCTGTGTCT-CGGGCACGTCGAGC ATTTCTATCGCGAAC TERM 75 66517 - 66505 - g 79 -2.6 -5.08824 | CTGCCACGCAAAAAA GCCG GAAGA CGAC GCGAGCGAAACAGTC Bphy_3158 65840 - 66535 + | cob(II)yrinic acid a,c-diamide reductase Bphy_3159 67251 - 66565 - | two component transcriptional regulator Bphy_3160 69004 - 68114 - | DeoR family transcriptional regulator TERM 76 71379 - 71400 + G 71 -12.3 -3.29471 | gap 1, opp_overlap 71375 CGGCGAAGCGATCGT GCGCGACGGC GTG GCCGTCG-GC TTCGTGTCGTCGGCG Bphy_3161 69118 - 71601 + | FAD dependent oxidoreductase Bphy_3162 72482 - 71625 - | AraC family transcriptional regulator Bphy_3163 72675 - 73556 + | NmrA family protein TERM 77 73833 - 73856 + T 78 -9.6 -4.03234 | AGCGTCCTTCACGAC CACGAGAAAC GCCA GCTTCTCGTG TTTCTCTAACGCCGC Bphy_3165 75017 - 74700 - | transposase IS3/IS911 family protein Bphy_3167 76021 - 75755 - | hypothetical protein Bphy_3168 77254 - 76349 - | LysR family transcriptional regulator TERM 78 77393 - 77406 + r 78 -3.8 -4.88407 | TTTGCGGTCCATCTG CCTG GCGATA CAGG TTTTTCGTTAGCTGC TERM 79 79353 - 79363 + r 70 -2.4 -4.79752 | overlap 79347 CCGCATTCGTCGTCG GCCC AAC GAGC TTTTATGTTCTTCGG Bphy_3172 80556 - 79549 - | quinone oxidoreductase Bphy_3173 80895 - 81908 + | adenosine deaminase TERM 80 81978 - 81964 - g 75 -7 -4.4009 | opp_overlap 81974, overlap 81965 81966 GGTGATCTGAGAAAA CTCGCG CAG CGCGCG CTACCCAGGGTGCTT TERM 81 81974 - 81991 + G 78 -3.3 -4.96646 | opp_overlap 81964 81966 81965 GAAAACTCGCGCAGC GCGCGCT ACCC AGGGTGC TTTTTGATTATGTAG Bphy_3174 81901 - 83100 + | L-lactate dehydrogenase (cytochrome) Bphy_3175 83465 - 84568 + | NMT1/THI5-like domain-containing protein Bphy_3176 84670 - 85584 + | LysR family transcriptional regulator Bphy_3178 87447 - 89603 + | CoA-binding domain-containing protein Bphy_3179 89600 - 90427 + | enoyl-CoA hydratase/isomerase Bphy_3180 90473 - 91237 + | ABC transporter related TERM 82 91482 - 91519 + G 70 -4.7 -4.45544 | overlap 91489 TGTCACCTTTTACGA GACCATGGTCGGCTTCT TCGC AGGAGCGGGCTTAGGTC TTTTGCTTGGTGGCA Bphy_3181 91237 - 92070 + | binding-protein-dependent transport systems inner membrane component Bphy_3182 92112 - 92525 + | hypothetical protein TERM 83 92586 - 92574 - g 71 -10.5 -3.61715 | opp_overlap 92573 CAGGTCGGCGAAGAA CGCGC AAC GCGCG ATGATCTCGCCGCCG Bphy_3183 92538 - 93308 + | class II aldolase/adducin family protein Bphy_3184 93305 - 94315 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 84 94604 - 94624 + G 71 -3.9 -4.50976 | TTCGAAGGATGCCAC GTCCTCGTC GAG GAACAGGAC TTTTATGATGTGACA Bphy_3185 94397 - 95422 + | adenosine deaminase Bphy_3186 96628 - 95489 - | porin Bphy_3187 97815 - 96892 - | LysR family transcriptional regulator TERM 85 98205 - 98194 - g 82 -7.2 -4.64657 | overlap 98196 TGAAACTGGCAAAAA CGGC TGAG GCCG CGCGGTTTGACCTGC Bphy_3188 98076 - 99416 + | xenobiotic compound monooxygenase A subunit TERM 86 99604 - 99592 - g 71 -9.1 -3.73647 | CGTATGTATCAACAA GGACG CAT CGTCC CATCCGGTGATCGAG Bphy_3189 99416 - 99934 + | flavin reductase domain-containing protein TERM 87 100062 - 100072 + G 80 -4.6 -4.77173 | CTCCTCGCCGTACTA CCGG TTC TCGG TTTCTTTTCTGGCAC Bphy_3190 100032 - 100238 + | hypothetical protein TERM 88 100779 - 100817 + G 70 -6.1 -4.24075 | gap 1, overlap 100780 GCGGCGCGGCGACCG TTGCAGTGGTCAAGGATG TTCT CATCCT-GATCGTTGCAC TTTCTCTTGCTGCGT Bphy_3191 100235 - 101707 + | Na+/solute symporter Bphy_3194 103536 - 104627 + | ISRSO5-transposase protein Bphy_3195 105730 - 104657 - | methyl-accepting chemotaxis sensory transducer Bphy_3196 107077 - 105992 - | outer membrane protein (porin) Bphy_3197 108864 - 107221 - | glucose-methanol-choline oxidoreductase TERM 89 107305 - 107326 + g 70 -11.6 -3.36749 | ATCGACCGCCCTATC CGCGACTG CCATCA CAGTCGCG TTGGTGTTCGAACTG TERM 90 108217 - 108201 - G 70 -2.1 -4.63218 | opp_overlap 108203, overlap 108203 CTCCTTCGAACAAAA CGCGCTC GAC GACGGCG TCTGTAACCAGAGTC Bphy_3198 110365 - 108869 - | aldehyde dehydrogenase Bphy_3199 111595 - 110411 - | membrane protein involved in aromatic hydrocarbon degradation TERM 91 111203 - 111171 - G 71 -13.3 -3.03124 | CTGGATTTCGCAACA CCGGCTCCCGGCACT GTG AGCGCCGGACGCCCG TAGCTAGTGCCGACA Bphy_3200 112618 - 111656 - | ferredoxin Bphy_3201 114113 - 112803 - | phthalate 4,5-dioxygenase Bphy_3202 114317 - 115318 + | LysR family transcriptional regulator Bphy_3203 116342 - 115395 - | oxidoreductase domain-containing protein Bphy_3204 117181 - 116339 - | protocatechuate 4,5-dioxygenase Bphy_3205 117581 - 117174 - | protocatechuate 4,5-dioxygenase, alpha subunit Bphy_3206 118489 - 117581 - | amidohydrolase 2 Bphy_3207 119268 - 118564 - | 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase Bphy_3208 120301 - 119273 - | amidohydrolase 2 Bphy_3209 121407 - 120298 - | hypothetical protein Bphy_3210 121524 - 122444 + | LysR family transcriptional regulator TERM 92 122629 - 122659 + T 77 -11.9 -3.5394 | opp_overlap 122615, overlap 122623 122630 122656 122658 AGTCCACTGGCGATT TGCCAGAAAACGC TTATC GCGTCTTCTGGCG TTTAGAAACGGCTTT TERM 93 122630 - 122658 + T 73 -13.2 -2.72043 | opp_overlap 122615, overlap 122623 122629 122656 GTCCACTGGCGATTT GCCAGAAAACGC TTATC GCGTCTTCTGGC GTTTAGAAACGGCTT TERM 94 122912 - 122942 + T 77 -11.9 -3.5394 | opp_overlap 122898, overlap 122906 122913 122939 122941 AGTCCACTGGCGATT TGCCAGAAAACGC TTATC GCGTCTTCTGGCG TTTAGAAACGGCTTT TERM 95 122913 - 122941 + T 73 -13.2 -2.72043 | opp_overlap 122898, overlap 122906 122912 122939 GTCCACTGGCGATTT GCCAGAAAACGC TTATC GCGTCTTCTGGC GTTTAGAAACGGCTT Bphy_3211 124141 - 122966 - | porin Bphy_3212 125763 - 124510 - | major facilitator transporter Bphy_3213 126565 - 126257 - | hypothetical protein TERM 96 127258 - 127241 - R 71 -6.9 -4.1891 | GGCGGGGAAGACAAA CCGCGAC TCCG GCCACGG CATGGCCGGCCGAAC Bphy_3214 127878 - 127285 - | isochorismatase hydrolase Bphy_3215 129148 - 127913 - | major facilitator transporter Bphy_3216 129243 - 129896 + | GntR family transcriptional regulator Bphy_3217 130203 - 130655 + | MarR family transcriptional regulator Bphy_3218 131311 - 130808 - | redoxin domain-containing protein TERM 97 130980 - 131001 + g 93 -4.3 -5.45802 | AGCGCATGACTGAAG TGAGCGCTG CCGT CTGCGATCA TTTTTATTTTGCCCG Bphy_3219 132350 - 131394 - | hypothetical protein TERM 98 132199 - 132164 - G 71 -14 -2.67209 | CACCAATCGAGATGA GGTGAGGACGCGGG GAAAAGCA CCCGCCTCCCCACC GGTTCAACACGGCCC Bphy_3220 133138 - 132359 - | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_3221 134234 - 133275 - | ferredoxin Bphy_3222 134746 - 134321 - | Rieske (2Fe-2S) domain-containing protein Bphy_3223 135818 - 134775 - | amidohydrolase 2 Bphy_3224 136975 - 135815 - | amidohydrolase 2 TERM 99 137930 - 137897 - R 75 -5.9 -4.66833 | gap 1, overlap 137898 TGCGAACGGGAAAAA GGCCTTGGCACGGTCA CAT CG-CCGGACCAAGGCA AATCCCTCACAAACA Bphy_3225 139459 - 137999 - | succinic semialdehyde dehydrogenase TERM 100 139731 - 139710 - R 100 -11.5 -5.24129 | overlap 139712 CTTTTCGAGAAAAAA GACGCCGCG GTCA CGCGGCGTT AAAAGGCTCGGCCCA TERM 101 139729 - 139712 - R 100 -14.1 -4.25873 | overlap 139710 TTTCGAGAAAAAAGA CGCCGCG GTCA CGCGGCG TTAAAAGGCTCGGCC Bphy_3226 141604 - 140183 - | Mn2+/Fe2+ transporter TERM 102 140994 - 140980 - G 100 -2.8 -5.52986 | opp_overlap 140987 ATCCGACGAAAAAAA TTAACG TGG CGATAA CAACCTGCAGAGGTC Bphy_3227 143737 - 142181 - | methyl-accepting chemotaxis sensory transducer TERM 103 143689 - 143711 + g 75 -4.1 -4.6038 | gap 1, opp_overlap 143692 CCAGGCCCATCCACA GCACAGC-CA TCAT TGAGCTGAGC TTTTGATTTAGTGTC TERM 104 143900 - 143911 + r 72 -4.4 -4.63218 | opp_overlap 143873 CCCGTGACTGACAGG TCGT TACA ACGA TTTTGTTGCAGCGGG Bphy_3228 145335 - 143989 - | putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like protein TERM 105 146011 - 146030 + r 71 -7.8 -4.08216 | overlap 146012 CCAAAGATGGGCAAT CTGTCGCG CTCT CGCGACAA TTTTGCAGAAAATCG TERM 106 147743 - 147757 + r 73 -2.8 -4.72986 | GTCCCCGAACTTCAC GAACTG GCT CATTTC TTTTTCCTCGGCATG Bphy_3230 149355 - 148252 - | transposase IS4 family protein TERM 107 149705 - 149676 - R 74 -7 -4.27316 | opp_overlap 149698 TTTGCCAATGCAAAA GACGGCGTCCCC GTGCTA GATGCCGCCGTC GTCGGTTATCCGCCG TERM 108 149792 - 149762 - R 71 -10.4 -3.6106 | overlap 149754 149786 TCGAATATCGGCAAA GGCCGAACTGCTTG TCC CAAAGAGCCCGGCC GGGATGTCGGGTCCG Bphy_3231 150721 - 149975 - | ISPsy22, transposase truncated TERM 109 150369 - 150392 + g 71 -4.4 -4.57073 | overlap 150370 150373 TGCCGCAATGCTTCG CTGTCGCGGA ATCG TCCGCGTCGA TTTTTGGAGAACGTC Bphy_3232 152426 - 151122 - | integrase family protein TERM 110 152490 - 152446 - R 71 -13.2 -2.52676 | gap 2, opp_overlap 152447 TACTCCGCGAACTGA TACCGTGTTTGATACCGTCACG CGC CGTGACGGTATCAAA-ATGG-A TCGTCTGCAGAGAAA TERM 111 152447 - 152490 + r 85 -17 -2.62184 | gap 1, opp_overlap 152446 ACTCCGCGAACTGAT ACCGTGTTTGATACCGTCACG CGC CGTGACGGTATCAAA-ATGGA TCGTCTGCAGAGAAA TERM 112 152616 - 152644 + r 74 -14 -2.56715 | gap 1, opp_overlap 152603 152611 AACCAGGGAATCGCC GGA-CCTCTGCAG ACCA CTGCAGAGGATCC TAAATTACTCCCACT Bphy_3233 153865 - 153284 - | TetR family transcriptional regulator Bphy_3234 154384 - 153893 - | hypothetical protein Bphy_3235 155914 - 154448 - | amidase Bphy_3236 157195 - 158121 + | alpha/beta hydrolase fold protein Bphy_3238 159408 - 159118 - | phage transcriptional regulator, AlpA Bphy_3239 161092 - 159818 - | integrase family protein TERM 113 161192 - 161242 + r 78 -3.2 -5.10933 | gap 1, opp_overlap 161202, overlap 161186 ACGAGTTCAGACGTA TGGAGACAAGCGTCGTTGTGCCG ACCGGA CGGT-CAACGTCGACAGTTTCCA TTTTATTTTCAATCA Bphy_3240 161960 - 161313 - | GTP cyclohydrolase II TERM 114 161430 - 161448 + g 72 -3.1 -4.70626 | overlap 161431 GACGGGAATGCCGTG CTTCGAC AGCGA GTCGAAC TTTTTGGGGTTGTTG Bphy_3241 162301 - 162735 + | signal-transduction protein TERM 115 162810 - 162790 - T 100 -7.6 -5.83226 | gap 1 AAGCCAACAAAAAAA GCCCAATCC GCGA GG-TTGGGC TAAGCCACCTTGCGG TERM 116 162943 - 162967 + T 100 -16.4 -3.9279 | CGAAGCTGCACATGC CCGGGCCGTG CACAC CGCGGCCCGG TTTATCAGGTTGCGT Bphy_3242 163319 - 162993 - | hypothetical protein TERM 117 163565 - 163538 - R 95 -14.8 -3.72576 | gap 1 GCCGCCTGGACGAAA GCCG-GGCCCGCG TTA CCCGGGCCGCGGC GCCTCGCCCGTCAGC Bphy_3243 164188 - 163550 - | DNA-3-methyladenine glycosylase Bphy_3244 164516 - 164872 + | transport-associated TERM 118 164953 - 164923 - f 71 -11.1 -3.32343 | opp_overlap 164925, overlap 164927 GCGATAGTCGGACAA CGCACCGCTCCTC GTCGT GAGGAGCGGTGTT TTTCTTTGTGATGCG TERM 119 164925 - 164951 + F 100 -18.8 -5.40464 | opp_overlap 164923 164927 GATAGTCGGACAACG CACCGCTCCTCG TCG TGAGGAGCGGTG TTTTTCTTTGTGATG TERM 120 164949 - 164927 - f 81 -14.9 -2.59748 | opp_overlap 164925, overlap 164923 TAGTCGGACAACGCA CCGCTCCTC GTCGT GAGGAGCGG TGTTTTTCTTTGTGA TERM 121 165395 - 165381 - g 79 -7 -4.56597 | opp_overlap 165352 165391 GCGGGGCCCGAAAAA GCGGGC CTT GCACGC GATACCGTGTTTGCC TERM 122 165497 - 165530 + G 93 -18.1 -3.42503 | GGACTTCCAGATTCG CGGCGCCAGCGCGGC GCTG GCCGTGCTCGCGTCG TTGTCCGTATTGACG Bphy_3245 165045 - 166193 + | sodium/calcium exchanger membrane region Bphy_3246 167134 - 166232 - | LysR family transcriptional regulator TERM 123 167913 - 167925 + G 70 -2.6 -4.59342 | CGACGATCCGAATGG CGCT ATTTC GGCG TTTCTTTCTGGTCAG Bphy_3247 167368 - 168177 + | extracellular solute-binding protein TERM 124 168873 - 168914 + G 79 -7.2 -4.5442 | gap 1, overlap 168878 168878 168895 GCAAGGGACTTTTCG CAGGCCGC-GCGGCGCGTT CTACC GATGCGTCGCCGCGTCGTG TTTTCTCATTGCGCG TERM 125 168895 - 168912 + G 73 -9.1 -3.8823 | overlap 168878 168873 CGCGGCGCGTTCTAC CGATGCG TCGC CGCGTCG TGTTTTCTCATTGCG Bphy_3248 168221 - 168967 + | polar amino acid ABC transporter, inner membrane subunit TERM 126 169158 - 169168 + G 93 -6.8 -5.17507 | overlap 169156 TCAGGGCACGCCGTT GCTG ATG CAGC TTTTTCTTGCGTTTT Bphy_3249 168964 - 169620 + | polar amino acid ABC transporter, inner membrane subunit TERM 127 169670 - 169683 + T 80 -4.5 -4.91429 | gap 1 TTTGGTTTTGTTTTT CGCTGG CGT CC-GCG TTTTGTTTCCGGTTT TERM 128 170027 - 170045 + T 78 -6.6 -4.6951 | opp_overlap 170029, overlap 170029 GTGGGTCAACGTCAA GACGCTCG GTG TGAGCGGC TTTCTTTTGCCTACT TERM 129 170116 - 170084 - T 100 -9 -4.93877 | overlap 170087 CCGCAGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACACCAGC AAACCAGAAGCAAAA TERM 130 170113 - 170087 - T 83 -13.7 -3.34291 | overlap 170084 CAGCAAAGAAAAGTA GGTGCCGCCCC GCACA GGGGCAACACC AGCAAACCAGAAGCA TERM 131 170145 - 170132 - T 70 -4.5 -4.53685 | gap 1 AAACCAGAAGCAAAA CGC-GG ACG CCAGCG CATAAAAGGCAAAGC Bphy_3250 171459 - 170191 - | gluconate 2-dehydrogenase (acceptor) Bphy_3251 173711 - 171471 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 132 172639 - 172662 + g 74 -11 -3.65046 | opp_overlap 172659 172660 TAGACAGCATCGACG CGCGTCTTCG CCTG CGAAAACGCG TTGTTCACGTCGCCG TERM 133 173264 - 173222 - G 84 -16.9 -2.82623 | overlap 173219 CCGCGCTGATAAGCA GCATGCGTGCCGTCGCGCC CGCGC GGCGCATCGGCTCCCATGC GAAGCGAATCGATGT TERM 134 173528 - 173481 - G 82 -16.2 -3.15544 | gap 1, opp_overlap 173486 173487 GTCGATCTGCACGAA TGCGTTCGGCGCGAACACGCCGC TTT GCGGCGTCTCCACGCCGT-CGCC GCCTATCACCGACTT TERM 135 173679 - 173637 - G 81 -11.9 -3.92522 | gap 1, opp_overlap 173646 173649 GCTGAACTTGAGAAA CGTGCGGCGCGA-GACGGCC GCGT GACCGTCATCGCGCGGCTTG CCGTTTTGCGCATCG Bphy_3252 174168 - 173713 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 136 174447 - 174419 - R 100 -19 -4.183 | opp_overlap 174423 CCAATGCGGAAGAAA CGAAGCAGCGCA GCCCT TGCGCTGCTTCG TCGGAGAACAGGCCT TERM 137 174423 - 174443 + r 79 -13.3 -3.14132 | opp_overlap 174419 TGCGGAAGAAACGAA GCAGCGCAG CCC TTGCGCTGC TTCGTCGGAGAACAG Bphy_3253 179090 - 174462 - | cellulose synthase domain-containing protein TERM 138 178226 - 178257 + gr 83 -13.6 -3.40403 | CCGCGAAGCCTTCGG CGACGGTGCGGCCG CGTG CGTCTGCACCGGCG TTCTGCTGCGCGCGC TERM 139 178260 - 178287 + gr 73 -12.6 -2.74192 | overlap 178257 GTCTGCACCGGCGTT CTGCTGCGCGCG CTCG CTCGCGCGGCGG TCCTGTTCCGAGATC Bphy_3254 180295 - 179063 - | cellulase TERM 140 179345 - 179298 - GR 74 -11.2 -3.53811 | opp_overlap 179311 179312, overlap 179300 179323 CCGAGCGCGCGGAAA TACGGCAGGAGCGCGCCCCA GAAACCAA TGGGGCCTTCTCCCGCCGCA TTGCCCGTGGTCGTC TERM 141 179343 - 179300 - GR 73 -11.6 -3.34715 | opp_overlap 179311 179312, overlap 179298 179323 GAGCGCGCGGAAATA CGGCAGGAGCGCGCCCCA GAAACCAA TGGGGCCTTCTCCCGCCG CATTGCCCGTGGTCG Bphy_3255 182861 - 180297 - | cellulose synthase subunit B TERM 142 181843 - 181805 - G 81 -16.6 -2.73875 | opp_overlap 181803 181807, overlap 181802 TGGTCGCGAACACCA CGGCGTTGCCCGACAGCG GCG CGTTGTCGAGCTGCGCCG GAAAGAGCGCGCCGC TERM 143 182823 - 182841 + g 77 -16 -2.62396 | CACACCCGTTCTCAT CGCCGCTG CAA CAGCGGCG TCGTATCGCAAGATC Bphy_3256 185096 - 182865 - | cellulose synthase catalytic subunit (UDP-forming) TERM 144 184416 - 184454 + g 74 -11.6 -3.61398 | overlap 184403 184406 GTTGCCCGCCTTCGC GTGGCGGTTGTGCGAGCG GAT CGTCCACGCAACCCCCAC TTCTTCACAGAACGC TERM 145 185066 - 185024 - G 74 -14.9 -2.54523 | gap 2 TCAGATGCGAAGCCA GCCGGTCGAAGCGCGAGCGGC GCG GCGGCTCG-GCGTCGAC-GGC ATCGAGAATGTCTTC Bphy_3257 185881 - 185093 - | cellulose synthase operon protein YhjQ Bphy_3258 186762 - 185878 - | hypothetical protein TERM 146 186272 - 186303 + g 72 -8.6 -4.1822 | gap 1 GGTGCTGCAACCGGG GCAGCCGCCATGCGC ACA GCGT-TCGCGGCCGC TTTCTTGCGCTCGGC Bphy_3259 187315 - 186860 - | hypothetical protein TERM 147 187483 - 187465 - H 100 -14.6 -4.84761 | overlap 187470 AGATGCCGATAAAAA GGCAACCG GCA CGGTTGCC GATGTGGAAAGCGGG TERM 148 187902 - 187875 - g 70 -5.5 -4.30576 | gap 1 TCTCGACGACGAAAA GGCCACGA-GCG CCGAC CGCGTAGCGGCC ATCGAAGCCGTCGCA Bphy_3260 187645 - 188052 + | hypothetical protein Bphy_3261 188143 - 188961 + | alpha/beta hydrolase fold protein TERM 149 189051 - 189011 - T 87 -12.6 -3.93369 | opp_overlap 189015 189039, overlap 189017 GCAACCGCAAGCAAA CAGAAAGGCTCCCGCGAA GCGCA TTCGCCGGAGGCTCTCCG TTACGTATCACGTCG TERM 150 189045 - 189017 - T 81 -8.8 -4.40184 | opp_overlap 189015 189039, overlap 189011 GCAAGCAAACAGAAA GGCTCCCGCGAA GCGCA TTCGCCGGAGGC TCTCCGTTACGTATC Bphy_3262 190076 - 189081 - | peptidase M23B TERM 151 189465 - 189443 - G 74 -14.9 -2.62184 | opp_overlap 189442 189433 GCGCCGGCCAGATGA GCGTCACGC CTTTT GCGTGACGC GCCACCTCGGCATTC TERM 152 189486 - 189542 + g 81 -16.5 -2.5805 | gap 3, overlap 189495 189514 189528 CTCGGCATTCACTTC GCGTGCTTCGGCCGCGCTCGGCG-CGGG TGCG CCCGGCGCAG-GCGCGGCGGCGGC-CGC CTTATCCGGGGTGCT TERM 153 189495 - 189543 + g 77 -13 -3.30441 | overlap 189486 189514 189528 CACTTCGCGTGCTTC GGCCG-CGCTCGGCGCGGGTGCGC CCG GCGCAGGCGCGGCG-GCGGCCGCC TTATCCGGGGTGCTG TERM 154 189953 - 189972 + g 72 -2.8 -4.63527 | gap 1, overlap 189951 189957 CCGTTGCCGTTTGCG CGGTCGACG CCG CGTTG-CTG TTTTTCGCGTCCTGC Bphy_3263 190482 - 190889 + | hypothetical protein Bphy_3264 191668 - 190913 - | DeoR family transcriptional regulator Bphy_3265 191830 - 192417 + | NUDIX hydrolase Bphy_3266 192872 - 193870 + | AraC family transcriptional regulator Bphy_3269 195551 - 194427 - | glycosyl transferase group 1 Bphy_3270 196534 - 195548 - | hypothetical protein TERM 155 195625 - 195614 - G 70 -5.8 -4.2704 | CGCATCACGAACAAA GGCA AGAA TGCC GGCCCCCTCTATCAC Bphy_3271 197058 - 196534 - | satase isoform II Bphy_3272 198257 - 197055 - | capsule polysaccharide biosynthesis protein TERM 156 197096 - 197081 - G 100 -8.2 -5.06451 | opp_overlap 197082 CATCATTTGAAAAAA CACGCC GTGC GGCGCG GGGGTCGATTGGACC TERM 157 197518 - 197508 - G 75 -3.2 -4.81249 | overlap 197515 197516 CTGCAAAGGCAAAAA GACA TAA CGTC GCGAGATCAACGCGT TERM 158 198156 - 198142 - G 76 -5.7 -4.57581 | AGTCGAAAGAATAAA TGAGC AAGCG GCTCA CTGGTCATAAAGACG Bphy_3273 199540 - 198284 - | polysaccharide biosynthesis protein TERM 159 198396 - 198380 - G 71 -7.9 -4.19817 | GCCAGCGACCGAAAA TGCCCGG ATA CTGGGCA GAACAGAAAGCCGCA Bphy_3274 200294 - 199683 - | undecaprenyl-phosphate galactose phosphotransferase Bphy_3275 202092 - 200998 - | hypothetical protein TERM 160 201237 - 201223 - G 78 -4.4 -4.8269 | GACAATGACTAAAAA TATTAT CCA ATAATA GGGAGATACTTTTAA TERM 161 201959 - 201949 - G 70 -5.4 -4.35085 | opp_overlap 201949 201950, overlap 201950 ATCTGTAAAAAAATA TGCT GGC AGCA GCTTTTCCTTAGTTA TERM 162 201950 - 201961 + g 76 -5.8 -4.50193 | opp_overlap 201949 201950, overlap 201949 TCTGTAAAAAAATAT GCTG GCAG CAGC TTTTCCTTAGTTAAT Bphy_3276 204337 - 202127 - | exopolysaccharide tyrosine-protein kinase Bphy_3277 204793 - 204356 - | protein tyrosine phosphatase Bphy_3278 206027 - 204855 - | polysaccharide export protein TERM 163 206295 - 206346 + G 80 -15 -3.13403 | gap 1, opp_overlap 206308 206309, overlap 206293 ACAGCCCCCCATTCC CGCCTCACCGAAACCGCGCTGCGCG CCG CCCGC-GCACCGTCTCGGCGAGGCG TATTGCTGAAAAAGC TERM 164 206409 - 206436 + G 79 -2.6 -5.02323 | AAAAACCGTCTGATC GAGCTGGACTTC TTCC GAGGGCTGGTTC TTTTATTTATCGTCG Bphy_3279 206229 - 207485 + | hypothetical protein Bphy_3280 208644 - 207559 - | hypothetical protein TERM 165 207857 - 207844 - G 73 -5.9 -4.3739 | overlap 207846 GACCGGTGCACAAAA CGGCA GCAT CGCCG CAATCGCCGTGACGA Bphy_3281 209021 - 209308 + | hypothetical protein Bphy_3282 210291 - 209356 - | alpha/beta hydrolase domain-containing protein Bphy_3283 210837 - 210346 - | hypothetical protein Bphy_3284 211889 - 210924 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 166 211385 - 211411 + g 86 -18.8 -2.52464 | opp_overlap 211380 211379 TGCGATAAATTTGCA TGGCGGCATCGA CAG TCGATGCCGCCG TCCGTTCACCGCCCA TERM 167 211944 - 211962 + r 86 -8.8 -4.56597 | CGGTCACCAATCAGG CGAGCTGT TCG ACAGCGCG TTTTTCGAGCGGCCG Bphy_3285 212868 - 211939 - | hypothetical protein TERM 168 212683 - 212705 + g 73 -12.6 -3.32844 | opp_overlap 212679 TTCGCGATACAGGTT CGGATCGCGG CTG CCGCGGCCCG TTCTGGGATCGCGCA Bphy_3286 213905 - 212955 - | choline ABC transporter, periplasmic binding protein TERM 169 213613 - 213624 + g 72 -7.2 -4.25104 | opp_overlap 213613, overlap 213593 TTCGCCTCGACAAAA GGCG CAAT CGCC TTTTCCTGCACCGGC TERM 170 213624 - 213613 - G 75 -7.2 -4.36914 | opp_overlap 213593 213613 TTCGCCTCGACAAAA GGCG CAAT CGCC TTTTCCTGCACCGGC Bphy_3287 214220 - 215215 + | AraC family transcriptional regulator Bphy_3288 216429 - 215287 - | porin TERM 171 216407 - 216421 + g 78 -2.8 -4.93365 | GCGACGCCTGTCAGT GCTG CGGCATT CAGC TTTTTCATTGTAGCG TERM 172 216625 - 216592 - R 91 -5.1 -5.56568 | opp_overlap 216592 216613 216615 216616, overlap 216595 216617 ACACGACTAAAAAAA GAAGCGCGCGTGTCA TAAA TGAAAAGCGCGCGGC CTTTGCGGCTGCGCG TERM 173 216622 - 216595 - R 93 -9.8 -4.8487 | opp_overlap 216592 216613 216615 216616, overlap 216592 216617 CGACTAAAAAAAGAA GCGCGCGTGTCA TAAA TGAAAAGCGCGC GGCCTTTGCGGCTGC TERM 174 216613 - 216645 + r 79 -6.8 -4.58685 | opp_overlap 216595 216592 216617, overlap 216592 216615 216616 CGCGTGTCATAAATG AAAAGCGCGCGGCC TTTGC GGCTGCGCGCGCTC TTTTTGAAGCACTTT TERM 175 216615 - 216643 + r 75 -9.4 -3.90316 | opp_overlap 216595 216592 216617, overlap 216592 216613 216616 CGTGTCATAAATGAA AAGCGCGCGGCC TTTGC GGCTGCGCGCGC TCTTTTTGAAGCACT TERM 176 216616 - 216642 + r 74 -12.9 -2.93708 | opp_overlap 216595 216592 216617, overlap 216592 216615 216613 GTGTCATAAATGAAA AGCGCGCGGCC TTTGC GGCTGCGCGCG CTCTTTTTGAAGCAC TERM 177 216641 - 216617 - R 100 -14.2 -4.61873 | opp_overlap 216592 216616 216615 216613, overlap 216595 216592 TGTCATAAATGAAAA GCGCGCGGCC TTTGC GGCTGCGCGC GCTCTTTTTGAAGCA Bphy_3289 217636 - 216671 - | choline ABC transporter, periplasmic binding protein Bphy_3290 219219 - 217678 - | choline-sulfatase TERM 178 218133 - 218171 + g 72 -11.7 -3.53444 | gap 1 GGCTGCGTCCGTCGA TGGTATCCGGC-CACTCC GCAC GGCGTGCGCCGGTTGCCA TTTCGAGCAGCGTGG TERM 179 218669 - 218647 - G 72 -6.9 -4.21194 | gap 1, opp_overlap 218665 218667, overlap 218648 CGCGACCACGCAAAA CGGCCGCGCG TCGC CGCCC-GCCG CGCGCTCACGCACGA TERM 180 219533 - 219569 + G 70 -13.8 -2.55351 | gap 2, overlap 219532 CGCCGTTGTTCGAGC GCGGCCATCGCGGCGTGA CAC TCACGCC-CGAAGGC-GC ATTGCTATACGAAGC Bphy_3291 219364 - 220290 + | LysR family transcriptional regulator TERM 181 220507 - 220521 + G 72 -7 -4.2461 | GCCGCCGGACAGGTT GCCGCC ATC GTCGGC TTTCTTGATCGGCAT Bphy_3292 220438 - 221316 + | formyltetrahydrofolate deformylase TERM 182 221358 - 221319 - T 74 -12.9 -3.01712 | gap 3, overlap 221303 221322 TGTCGTGCTGTAACA GCATGAGCCGCCGCG-CCGC ATC GCGGACGCGGCGGCG-A-GC ATCAGGCGATGCTCA TERM 183 221356 - 221322 - T 80 -14.3 -2.73875 | overlap 221303 221319 CGTGCTGTAACAGCA TGAGCCGCCGCG-CCGC ATC GCGGACGCGGCGGCG-A GCATCAGGCGATGCT Bphy_3293 223038 - 221371 - | amino acid permease-associated region TERM 184 222400 - 222388 - G 73 -9.1 -3.85817 | ATCGCCCGTGACAAA CGGCA CGA TGCCG ACAATTAGCAGCGGC TERM 185 223144 - 223092 - R 88 -11.5 -4.21773 | gap 2, opp_overlap 223092 223093, overlap 223093 CTGGAACACAAACAA CCGTGACACGGCGATGCGAATGCGC GCGCA GCGCATTCGCATCGCCAT--CAAAA CCCTTATCAGAACGC TERM 186 223143 - 223093 - R 76 -12.8 -3.12341 | gap 2, opp_overlap 223093 223092, overlap 223092 TGGAACACAAACAAC CGTGACACGGCGATGCGAATGCGC GCGCA GCGCATTCGCATCGCCAT--CAAA ACCCTTATCAGAACG Bphy_3294 224038 - 223175 - | substrate-binding region of ABC-type glycine betaine transport system TERM 187 223458 - 223474 + g 72 -6.5 -4.21319 | CAGTGTGGGACCCAT CCCGTGA CGA TCACAGG TTTATTGGCATTCAT TERM 188 224156 - 224172 + r 81 -12.3 -3.65135 | overlap 224151 TGGCTTTTTTTCTGT CTGCGAC GCA GTCGCAG TTCTGGTTCTTTCGC TERM 189 224228 - 224218 - R 85 -2.4 -5.63374 | GCAACAGCAAAAAAA CCGG GCG CCGC AGGCAAGATCACTTA Bphy_3295 225394 - 224237 - | oxidoreductase FAD-binding subunit Bphy_3296 226727 - 225447 - | Rieske (2Fe-2S) domain-containing protein Bphy_3297 227548 - 226769 - | electron transfer flavoprotein beta-subunit Bphy_3298 228723 - 227545 - | electron transfer flavoprotein alpha subunit TERM 190 228516 - 228569 + g 79 -10.2 -4.07687 | gap 1 CGAGCGCGCCACGGT CGCTGTGCGCGAC-CACGAGCAGTG TGCGC TGCGGCGCCTGCGTCGTGCGCAGCG TTTTAGCGGCAGCAT Bphy_3299 230646 - 228727 - | hypothetical protein Bphy_3300 232712 - 230649 - | NADH:flavin oxidoreductase/NADH oxidase TERM 191 231522 - 231559 + g 84 -13.3 -3.69483 | gap 1, overlap 231545 231549 CAGTCCCGCCGGACC CGCGCCGACCACGACCAC CTT GCGG-CGCGGTCCGCGCG TCTTTTCGATCACGT Bphy_3301 233299 - 232766 - | 4-vinyl reductase 4VR TERM 192 232840 - 232854 + g 71 -12.8 -3.02511 | GCACTTCTTTCGACT GCGCGC GCG GCGCGC TCTTGCCGCCGTCAG Bphy_3302 234304 - 233333 - | membrane dipeptidase TERM 193 233677 - 233709 + g 89 -12.8 -4.053 | gap 1, opp_overlap 233677 233675 GGAACGGCGAGAACA TCGTC-ACGCCGACG AAGC CGTTGGCGTCGGCGA TTTCTCTCAGCTGCT Bphy_3303 235622 - 234348 - | glycine hydroxymethyltransferase TERM 194 234532 - 234549 + g 72 -6.9 -4.2349 | opp_overlap 234531 234530, overlap 234533 234546 GTGCCGAGACGAATG CCCGACG TCAC CGTCGGC TTTTCCGTATCGAAC TERM 195 235109 - 235128 + g 75 -7.8 -4.24948 | opp_overlap 235089, overlap 235089 CAATGAGCATCGACG GCTTGTGC TCAT GCGCGAGC TTTTCGATCTGGTCA Bphy_3304 236125 - 237141 + | AraC family transcriptional regulator TERM 196 237218 - 237231 + F 70 -3.7 -4.67011 | CGGTCTCGGCCTCTG CGCTG GCAT CTGCG TTTTTGCATCGGGTT TERM 197 237251 - 237275 + F 91 -7 -5.27335 | overlap 237253 TGCATCGGGTTGCTG GCGTTGCCCC TGTGC GGGGCGGCAC TTTTTCTTTGCCGCG TERM 198 237690 - 237658 - f 80 -4.6 -4.90525 | overlap 237661 GAATGGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACGCCAGC AAACCAGACGCAAAA TERM 199 237776 - 237733 - f 80 -4.4 -4.88222 | gap 1, opp_overlap 237747, overlap 237736 ACGAAAAGCCAAAAA GCAGACGCGCGC-CACCGTGT CGC AGACGGTTTGCGCGCACCATC CCACTGCGCTAAGGT TERM 200 238291 - 238278 - g 71 -8.1 -4.07568 | GCGCGCGCGTGAAAA CGACG GGTT CGTCG GCGTCGGGCCCTTGC TERM 201 238879 - 238894 + G 75 -10.4 -3.87373 | opp_overlap 238878 ACTCGCGCAACGCAC GCGCAC TCAA GTGCGC TTTCTCGACGATGTG Bphy_3305 237827 - 240382 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 202 240533 - 240567 + G 95 -18.7 -3.8591 | gap 1, overlap 240525 GGATCGGATTGATTG CGCGCC-GCAATCCAG TTCT CTGGGTTGCCGGCGCG TTATTGCTTCTGCAC Bphy_3306 240484 - 241029 + | hypothetical protein TERM 203 241109 - 241079 - T 100 -16.3 -5.71712 | gap 1 CGCCATATAAAAAAA TGCTGCGT-GCCTC GTGA GAGGCAACGCAGCA TCGTCCATGATAAGG Bphy_3307 242376 - 241177 - | formaldehyde dehydrogenase, glutathione-independent TERM 204 242493 - 242504 + H 88 -5.8 -5.20534 | opp_overlap 242462 242492 242487, overlap 242487 242484 CTGAACCGACAAAGC CGGT CGGG ACCG TTTTTGTTGATTGAT TERM 205 242847 - 242813 - g 75 -7.8 -4.26903 | gap 1, opp_overlap 242831 242832, overlap 242816 242818 CGCATCGCAGCAAAA GC-ACAGCCGCGCGC GCGCTT GCGCGCGATCGTCGC GGCGAATTTCGATGT Bphy_3308 242573 - 243163 + | TetR family transcriptional regulator TERM 206 244387 - 244360 - g 70 -5.4 -4.371 | overlap 244361 GCGACGACATGAAAA TCGTGCGCGAAG AAAT CTTCGGGCCCGT GATGAGCATCCTCAG Bphy_3309 243216 - 244685 + | betaine aldehyde dehydrogenase TERM 207 245292 - 245314 + G 80 -16.2 -2.87132 | TGACGGCCAACGGCC GCCGCGCGAG CAC CGCGCGCGGC TATCTGGACCAGGCG Bphy_3310 244697 - 246415 + | choline dehydrogenase TERM 208 246450 - 246421 - f 71 -12.9 -2.52491 | opp_overlap 246422, overlap 246420 TACACATTGACGAAT GCGTGCGCGTCAT GCAA ATGACGCACACGT TCCATCCCAATGCCG TERM 209 246422 - 246449 + F 83 -14.2 -3.06183 | opp_overlap 246421 246420 ACACATTGACGAATG CGTGCGCGTCAT GCAA ATGACGCACACG TTCCATCCCAATGCC TERM 210 246609 - 246585 - g 81 -13.6 -3.53091 | gap 1, opp_overlap 246603 ACTGCTTCCGCCAAA CGAGCCAGCGC TGCT GCGC-GGCTCG AACGCCTGCCGTTTT Bphy_3311 246561 - 247985 + | major facilitator transporter Bphy_3312 249457 - 248282 - | metallophosphoesterase TERM 211 249638 - 249626 - R 85 -3.4 -5.36441 | overlap 249611 GTGTCACACAAAAAA GGTT TGTGT AACC GTTCGTGAGGCGCGC Bphy_3313 251040 - 249700 - | response regulator receiver protein TERM 212 250077 - 250058 - G 84 -6.4 -4.72846 | gap 1, overlap 250050 250059 GCACACACGGAAAAA CCCCG-CAC GTT GTGACGGGA ATCTGAGCGGAAGCT TERM 213 250219 - 250185 - G 100 -15.9 -4.67755 | gap 2, opp_overlap 250205, overlap 250187 250188 AGAGCGACGCAAAAA GACGCGCGTGCAGACGA TGC TCGTCTGCA-GCGCG-C TGCAAGCCGATATGT TERM 214 250218 - 250187 - G 100 -19.6 -3.95214 | gap 1, opp_overlap 250205, overlap 250185 250188 AGCGACGCAAAAAGA CGCGCGTGCAGACGA TGC TCGTCTGCA-GCGCG CTGCAAGCCGATATG TERM 215 250219 - 250188 - G 93 -19.6 -2.96405 | gap 1, opp_overlap 250205, overlap 250187 250185 GCGACGCAAAAAGAC GCGCG-TGCAGACGA TGC TCGTCTGCAGCGCGC TGCAAGCCGATATGT TERM 216 251753 - 251775 + r 90 -10.5 -4.58395 | opp_overlap 251741, overlap 251754 TAAGCCGGAATCTTT CGGCCGACC TTCAT GGTCGGCCA TTTTTCAGCCGTACC TERM 217 251754 - 251774 + r 83 -14 -3.34716 | opp_overlap 251741, overlap 251753 AAGCCGGAATCTTTC GGCCGACC TTCAT GGTCGGCC ATTTTTCAGCCGTAC Bphy_3314 252279 - 251800 - | OsmC family protein TERM 218 252076 - 252064 - G 81 -7.7 -4.46112 | CGCGATCGAAAGAAA CCACA GCA TGTGG CAACTCGACAGCGCT Bphy_3315 253243 - 252311 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_3316 253849 - 253337 - | hypothetical protein Bphy_3317 254978 - 253962 - | aldo/keto reductase TERM 219 254237 - 254262 + g 73 -11.8 -3.31144 | TCTTGCGCAGCGCTT CGACGAGCGC CAGGTT GCGCTCGACG TTCTCGCCCTGGAAG Bphy_3318 255079 - 255990 + | LysR family transcriptional regulator Bphy_3319 256270 - 256007 - | hypothetical protein TERM 220 256374 - 256334 - R 84 -13.2 -3.73224 | gap 1, overlap 256341 GCAGTGCGCATGAAA CGGCAAAGCGGCGCGTCCC GCAA GCGGCGCGCCGCC-TACCG TTGACGTTGCCGTCT TERM 221 256368 - 256341 - R 88 -14 -3.73107 | overlap 256334 GCATGAAACGGCAAA GCGGCGCGTCCC GCAA GCGGCGCGCCGC CTACCGTTGACGTTG Bphy_3320 257211 - 256390 - | alpha/beta hydrolase fold protein TERM 222 257495 - 257521 + H 78 -10.9 -3.74158 | gap 1 CGAAGAGGCTGGGCG CGGGCA-CGGTC GCGG GATCGGTGCCCG TTTCCATGTCGTTGC TERM 223 257583 - 257544 - H 73 -12.2 -3.05384 | gap 2, opp_overlap 257550 GTCGTTGCGATGTAA CGCGAGCGCCCTGACGCC CGCTTC GGCGGCAGG-CG-TCGCG GCGTTTTACGACGCA TERM 224 257550 - 257586 + H 95 -13.6 -4.08216 | opp_overlap 257544 GCGATGTAACGCGAG CGCCCTGACGCCCGCT TCGGC GGCAGGCGTCGCGGCG TTTTACGACGCATGA Bphy_3321 257813 - 259000 + | hypothetical protein Bphy_3322 259350 - 259036 - | hypothetical protein TERM 225 259903 - 259859 - g 90 -15.9 -3.65046 | gap 1, opp_overlap 259856 TCCCGACGGCAACAA GCTTTGCGTGTGCTGTCACG GCCCTG CGTGACAGCAC-CACAGAGC ACTTGCGACACACGC Bphy_3323 259497 - 259889 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_3324 260909 - 259923 - | AraC family transcriptional regulator TERM 226 260649 - 260592 - G 70 -7.9 -3.99957 | gap 4, overlap 260585 CGAAATACCGAGAAA CG-GCTCGTCGATGCTCGCTTCCGTCTCG CATT CGA-ACGGCAGCG-GCACGGAC-AGCACG AGATACTGCTGCGCA Bphy_3325 261296 - 262348 + | alcohol dehydrogenase TERM 227 262477 - 262499 + F 72 -5.5 -4.49981 | gap 1, overlap 262463 ACCGGCGCGCCGTCC CGCTGACGGC GCAC GCCG-CGGTG TTTTCTGCTGGTCTG Bphy_3326 262534 - 263493 + | LysR family transcriptional regulator Bphy_3327 263881 - 263456 - | polymorphic membrane protein, filamentous haemagglutinin/adhesin TERM 228 263901 - 263930 + r 80 -2.2 -5.28166 | gap 1 ATCCCCGAACGCGGC TGAACACGAGCCG GTAAG TGG-TCTTGTTCA TTTTTATTCGTTTTA TERM 229 264112 - 264096 - R 100 -10.8 -5.40072 | opp_overlap 264110 GTCGGCCGAAAAAAA GCCCGC ACTTG GCGGGC GTTGAAGATAATCGC TERM 230 264373 - 264349 - R 73 -3.4 -4.78326 | overlap 264352 264353 TGGCAAAGAAAGAAA GTACCGCCCC GCACA GGGGCAACGC CTGAAGTACGAAGGC Bphy_3328 264717 - 264451 - | hypothetical protein Bphy_3329 265139 - 264726 - | dihydroneopterin aldolase Bphy_3330 265819 - 265169 - | sarcosine oxidase gamma subunit TERM 231 265636 - 265613 - G 73 -9.4 -3.94409 | GACAGCATTGACAAA CGCCGCGTCG CGCA CGTCGCCGCG CAGATTCACGAGATC Bphy_3331 268808 - 265809 - | sarcosine oxidase alpha subunit family protein TERM 232 268461 - 268437 - G 72 -7 -4.25104 | opp_overlap 268437 GGTCTTGTAGTAAAA GCCCGCGGGC ATGAA GCGCGCGAAC TTCTGATTGATGGCC Bphy_3332 269104 - 268805 - | sarcosine oxidase delta subunit heterotetrameric Bphy_3333 270427 - 269183 - | sarcosine oxidase beta subunit family protein Bphy_3334 271850 - 270462 - | L-serine dehydratase 1 TERM 233 270983 - 271002 + g 74 -10.6 -3.76048 | TGGTCGGCGCGGTGA CGACGCGG CCGC CCGCGGCG TTCTCTTCGTTGACG TERM 234 271968 - 271942 - H 86 -5 -5.27206 | overlap 271943 CAGATAGAACAAAAA CGGCATCGACGT GGG ATGGCGACGCCA GAGCGGGTTGCCACT TERM 235 272041 - 272014 - H 72 -4.8 -4.65895 | gap 1, opp_overlap 272019, overlap 272020 CCGGTGACGGAAAAA CAC-AAGTCCGGG CGG CCCGGGGTTCGTG GGATGGCAACCCGCA Bphy_3335 272194 - 273279 + | AraC family transcriptional regulator Bphy_3336 274375 - 273398 - | hypothetical protein TERM 236 274056 - 274037 - G 78 -10 -3.97834 | gap 1 CAAGCTGATCAGAAA CGCG-GCGT TGG ACGCACGCG TCAGCGAAATCCCGA Bphy_3337 274459 - 275385 + | LysR family transcriptional regulator TERM 237 275461 - 275424 - f 100 -17.9 -4.07568 | opp_overlap 275431, overlap 275431 GGTTTCGTCTGAAAA CAAAAAAGGCGAAGAGG CCAC CCTCTTCGCCTTTCCCG CACGCATCCATTCAA TERM 238 275431 - 275454 + F 91 -16.8 -3.53224 | opp_overlap 275424 275431 TCTGAAAACAAAAAA GGCGAAGAGG CCAC CCTCTTCGCC TTTCCCGCACGCATC TERM 239 275454 - 275431 - f 100 -16.8 -5.79595 | opp_overlap 275431, overlap 275424 TCTGAAAACAAAAAA GGCGAAGAGG CCAC CCTCTTCGCC TTTCCCGCACGCATC Bphy_3339 275782 - 276228 + | hypothetical protein TERM 240 276317 - 276329 + G 70 -2.7 -4.65895 | opp_overlap 276326 GATCGTCTTTACAGA TGGAT TCA ATTCA TTTTTGAATCACACA Bphy_3340 276225 - 276464 + | hypothetical protein Bphy_3341 276474 - 276956 + | hypothetical protein TERM 241 276987 - 276964 - T 100 -16.8 -5.14563 | opp_overlap 276964, overlap 276941 GCCGTTAGCAAAAAA GGCGAAGAGG CGAC CCTCTTCGCC TTTCCCATCCTCATC TERM 242 276964 - 276987 + T 91 -16.8 -3.62572 | opp_overlap 276941 276964 GCCGTTAGCAAAAAA GGCGAAGAGG CGAC CCTCTTCGCC TTTCCCATCCTCATC Bphy_3342 278456 - 277017 - | glucose-6-phosphate 1-dehydrogenase Bphy_3343 279645 - 278728 - | ornithine cyclodeaminase/mu-crystallin Bphy_3344 280676 - 279669 - | proline racemase TERM 243 280188 - 280158 - G 79 -2.5 -4.99043 | gap 1 CGTGTAGAAATAAAA CGCGC-CGCCGA ACGCAATG TCGCCGAGCACG GTGCCGAAGCCCGGG Bphy_3345 281449 - 280799 - | hypothetical protein Bphy_3346 282786 - 281446 - | FAD dependent oxidoreductase Bphy_3347 283241 - 284095 + | response regulator receiver protein Bphy_3348 285960 - 284134 - | integral membrane sensor hybrid histidine kinase Bphy_3349 286478 - 285957 - | oxidoreductase molybdopterin binding TERM 244 286698 - 286685 - g 75 -3.1 -4.72272 | gap 1, overlap 286686 286687 GTCCGTCATGAAAAA GCCGGT TTT ACCG-C TGACCTACGAACAGC TERM 245 286763 - 286779 + G 71 -7.9 -4.07885 | GCTCGAAGAGCGCTT TGCCGCC GCC GTCGGCA TTTTACGGGGCGGTG TERM 246 286785 - 286841 + G 86 -13 -3.89346 | gap 2 GCCGTCGGCATTTTA CGGGGC-GGTGCGCCGCTGGCGT-TGAT GGC ATCGCACGCCGTCGGCGTGCCCGTCGCG TTTCTCAGCTACGAC TERM 247 287041 - 287069 + G 72 -3 -4.62302 | gap 1, opp_overlap 287032 287030 AAATCAGCCGCATCC GCCCGGA-CTACG CCAA CGACGCTTCGGGC TTTTTCGCGCTGTTC TERM 248 287490 - 287443 - g 77 -11.3 -3.80014 | gap 3, opp_overlap 287452 287487 ACAGCCACGACGAAA CGC-CCGAAGGCGCCGCCGCGCAC AAG GCG-GCCGCGGCGC-TTCGTTGCG GTGTCACGCATTTCG TERM 249 287452 - 287481 + G 77 -12.8 -3.36785 | gap 1, opp_overlap 287443 ACGAAACGCCCGAAG GCGCCGCCG-CGC ACAAG GCGGCCGCGGCGC TTCGTTGCGGTGTCA Bphy_3350 286677 - 287624 + | phosphoribosyltransferase Bphy_3351 289373 - 287700 - | NERD domain-containing protein TERM 250 289460 - 289450 - H 84 -2.4 -5.41941 | opp_overlap 289450 GAAAGGAAAGAAAAA CCCG CTT CGTG TATCGTAACTGGTTG Bphy_3352 289532 - 290158 + | glutathione S-transferase domain-containing protein TERM 251 290427 - 290410 - g 100 -9.1 -5.00884 | ATCTTGGCGAAAAAA CGGGCAA GTTC CTGCCCG CCAGCCTGCGCGACC Bphy_3353 290163 - 290789 + | glutathione S-transferase domain-containing protein TERM 252 291387 - 291373 - g 75 -7 -4.35524 | overlap 291374 CGCGCAAATCGAAAA CGCCGG ATA CCGGCT CGCCGGTGACGGAAT Bphy_3354 290876 - 291469 + | ferric uptake regulator family protein Bphy_3355 291965 - 291489 - | two component Fis family transcriptional regulator Bphy_3356 293081 - 292338 - | TetR family transcriptional regulator TERM 253 292957 - 292998 + g 88 -17.9 -3.01712 | gap 1 CCGGATGGGCGGCCG GGTCGGCGCGCG-GCGGGCT CCG GGCGCGCTCGCGCGCCTGCC TCTTCAACGCCGCCA TERM 254 294391 - 294361 - g 75 -6.8 -4.36914 | opp_overlap 294382 CCTTGCCGTACAAAA CGCAGTGCCG TTCAAACATCT CGGCACGGCG ACGTCGGGCGCCACG TERM 255 294438 - 294455 + G 91 -6.9 -5.00616 | overlap 294434 294435 GCGGCTCGGTGGGCG TCGCGGC TTTC GGCGCGA TTTTTTCGAACGGAC Bphy_3357 293171 - 294688 + | EmrB/QacA family drug resistance transporter TERM 256 294786 - 294810 + F 100 -14.9 -4.86731 | opp_overlap 294780 TTTCAGAAATTCGCA GGCCGGTCGCG AAG TGCGCCCGGCC TTTTGTTTGAGCGCG TERM 257 295178 - 295204 + G 80 -14.4 -3.31792 | overlap 295172 295169 CCGTGTACACGTTGC GGCGGCGTGCTG TAT CAGCATGCCGAC TTCTGCCCGTACTGC TERM 258 295881 - 295846 - g 85 -11.8 -4.12902 | gap 1 GAAGGACCGCGAAAA CAGGCGTGACGCCGCGC TCG GCGTGGCGA-ACACCTG TGCGAAAGACAAACT Bphy_3358 295124 - 296236 + | hypothetical protein Bphy_3359 296356 - 297456 + | TRAP transporter solute receptor TAXI family protein TERM 259 297484 - 297522 + T 100 -18.2 -3.14132 | opp_overlap 297485 297489, overlap 297490 AGCAGAGCCACCAGA AGAAAGCGCCACGGCGCG CGA TGCGTCGTGGCGTTTTCG TTGCTGCGCGACAGG TERM 260 297521 - 297485 - T 90 -16.6 -3.43492 | opp_overlap 297484 297490, overlap 297489 GCAGAGCCACCAGAA GAAAGCGCCACGGCGC GCGAT GCGTCGTGGCGTTTTC GTTGCTGCGCGACAG TERM 261 297517 - 297489 - T 90 -11.6 -4.35885 | opp_overlap 297484 297490, overlap 297485 AGCCACCAGAAGAAA GCGCCACGGCGC GCGAT GCGTCGTGGCGT TTTCGTTGCTGCGCG TERM 262 297490 - 297516 + T 100 -18 -4.45544 | opp_overlap 297489 297485, overlap 297484 GCCACCAGAAGAAAG CGCCACGGCGCG CGA TGCGTCGTGGCG TTTTCGTTGCTGCGC Bphy_3360 299032 - 297548 - | RND efflux system outer membrane lipoprotein TERM 263 298682 - 298644 - G 71 -13.7 -2.71447 | opp_overlap 298671 298674, overlap 298641 AGCGACGACAGATCA GGTTCGCGCGTGCGCAG ATACG CCGCGCTCGCGCCGACC TTCGGCAGCTCGTTG TERM 264 298741 - 298715 - G 74 -12.9 -3.28712 | opp_overlap 298715 CTGCTGCTGGGACAA GCCCGCGCGCG CCTGC CGCACGCGCGC CTGCGCGGCACGCAG TERM 265 299015 - 298995 - G 71 -13.9 -2.75535 | overlap 298975 298986 CCAACATGCGAACGA CGGCGGCGC GCG GCGCCGCCC AGATCAAATAGCTTC Bphy_3361 300648 - 299041 - | EmrB/QacA family drug resistance transporter TERM 266 299263 - 299239 - G 100 -13.5 -4.56597 | GTGCCGCGCGAAAAA GCCTGCCGCGC TCT GCGCGACATGC TCCTCGCCGACCAGC TERM 267 300392 - 300359 - G 76 -5.9 -4.46212 | overlap 300360 300373 TTGCCGAGCAGAAAA TTGCGCAGCCCAAAC ACGC GTGTGAGCCACGCAG CGAGCGGAATCATCA Bphy_3362 301789 - 300641 - | secretion protein HlyD family protein TERM 268 302444 - 302411 - g 75 -12.3 -3.55444 | GCGTCAGCTCGGAAA TCGTCGGCCGGCTGC TCGG GCGGCCCGCAGACGA TCCTGAAACGATCAT Bphy_3363 301924 - 302658 + | TetR family transcriptional regulator TERM 269 303845 - 303863 + F 75 -5.8 -4.58283 | overlap 303846 TGGACCGGCTCACCT CGACCGCG CGC CGCGGCCA TTTTTGGAGCGCTTC TERM 270 304095 - 304062 - g 71 -7.3 -4.15044 | gap 1, opp_overlap 304067 304094 CGTCGTTCGAAGAAA CGCCGCCGTCCGCCGA CGA TCTGCTG-CAACGGCG CGCGGCCGTGCTCGC Bphy_3365 303941 - 304507 + | GCN5-related N-acetyltransferase Bphy_3366 305120 - 304566 - | hypothetical protein Bphy_3367 305373 - 306323 + | Urea transporter Bphy_3368 306346 - 307125 + | class II aldolase/adducin family protein Bphy_3369 307201 - 307386 + | 4-oxalocrotonate tautomerase TERM 271 307389 - 307409 + F 89 -6.7 -5.06451 | overlap 307398 307408 GTCTGATGCTTAGTG CCTGCGGCG CGG CGTTGCCGG TTTTTTGACCTGGTG Bphy_3370 307971 - 308936 + | hypothetical protein TERM 272 309007 - 308980 - g 89 -18.6 -2.93585 | opp_overlap 308978 308977 308970, overlap 308977 308998 CTACACCCGAAAGGA GTCGGTGGTCTT TCGA AAGACCACCGAC GAGTTTGGCGGTCTG Bphy_3371 308936 - 309595 + | hypothetical protein Bphy_3372 309684 - 310010 + | hypothetical protein TERM 273 310036 - 310051 + F 100 -7.5 -5.86061 | opp_overlap 310036 GGCTCCAGAACGGAA CCCGC CATCGA GCGGG TTTTTTTTCGTCCGG TERM 274 310503 - 310482 - g 74 -14.5 -2.54459 | overlap 310481 310471 310484 AAGAGCATGAGCAAT TACGCGTCG CCTT CGACGCGTA CCGCCTACAACTTCC Bphy_3373 310206 - 310604 + | hypothetical protein Bphy_3374 310622 - 311032 + | antirestriction protein Bphy_3375 311041 - 311256 + | hypothetical protein Bphy_3376 311265 - 311597 + | hypothetical protein TERM 275 311691 - 311709 + F 100 -8.8 -5.1244 | GCCGGACGAATTTCA GCCCGC AATCTCG GCGGGC TTTTTCTATTGCTGG TERM 276 311754 - 311740 - f 71 -7.8 -3.96624 | overlap 311743 CAGCCGCACGATAAA CACTCG CAG CGAGCG CGCGGATTGCGCCTC TERM 277 311895 - 311911 + F 100 -7.2 -5.86332 | opp_overlap 311894 311895 CTTTGGCAGAAACAG CCCGCT ATCTC GGCGGG TTTTTTTTAGGTTCG Bphy_3377 312012 - 313562 + | phage protein Bphy_3378 314034 - 313855 - | hypothetical protein Bphy_3379 314259 - 314044 - | hypothetical protein Bphy_3380 314300 - 314764 + | hypothetical protein Bphy_3381 315546 - 314761 - | tail collar domain-containing protein TERM 278 314905 - 314923 + g 70 -11.6 -3.4072 | GTTGCCGTGATTGCC CCCGCCCG CGT CGGTCGGG TTCTGGTAGCGGCTC Bphy_3382 318854 - 315543 - | Phage-related protein tail component-like protein TERM 279 318457 - 318488 + g 70 -13.8 -2.52516 | gap 1, opp_overlap 318457 318456, overlap 318456 GTCATCTGCGGAAAG CCGAGCGTTAC-GCG GAT CGCGGTGACGTTCGG ATTGGTGATCGAGCG Bphy_3383 319423 - 318854 - | lambda tail assembly I TERM 280 319349 - 319330 - G 73 -9.2 -3.91798 | CAAGCTGCAAGCAAA GCGCGAGG ATCG CTTCGCGC GGCGAATGCACGTCG Bphy_3384 320155 - 319433 - | NLP/P60 protein Bphy_3385 320850 - 320152 - | phage minor tail protein L Bphy_3386 321251 - 320847 - | minor tail family protein Bphy_3387 323395 - 321248 - | hypothetical protein TERM 281 323484 - 323443 - R 89 -16 -3.43492 | gap 2, opp_overlap 323437 CGACACTGAGGACAA GGGGCT-GCTGTTCG-CGCG CGGG CGCGGCGAACAGGTAGCCCC AGCACATCAGTTCAT Bphy_3388 323916 - 323584 - | hypothetical protein Bphy_3389 324856 - 323924 - | hypothetical protein Bphy_3390 325212 - 324853 - | hypothetical protein TERM 282 325160 - 325176 + g 80 -13.7 -3.35073 | opp_overlap 325160 GCGAGCATTAAAAAA GCCCTGC TGG GCAGGGC TTGATTGAGGATGAT TERM 283 325176 - 325160 - G 100 -13.7 -5.1861 | opp_overlap 325160 GCGAGCATTAAAAAA GCCCTGC TGG GCAGGGC TTGATTGAGGATGAT Bphy_3391 325714 - 325205 - | HK97 family phage protein Bphy_3392 326052 - 325711 - | phage head-tail adaptor Bphy_3393 326630 - 326055 - | phiE125 gp8 hypothetical protein Bphy_3394 327833 - 326640 - | HK97 family phage major capsid protein TERM 284 326957 - 326967 + g 91 -8.2 -4.7373 | AGCCGAACAGATATT CGCC CTG GGCG TTTTTCATCAGCTGG Bphy_3395 328557 - 327847 - | HK97 family phage prohead protease Bphy_3396 329898 - 328561 - | HK97 family phage portal protein Bphy_3397 331659 - 329914 - | terminase TERM 285 331359 - 331340 - GR 72 -9.2 -3.6502 | TACGCCTCACGGAAA CGGCGCGA GCCG TCGCGACG CTTCCAGCCGAACAG Bphy_3398 332095 - 331619 - | P27 family phage terminase small subunit Bphy_3399 333149 - 332079 - | DNA-cytosine methyltransferase Bphy_3400 333757 - 333155 - | nuclease TERM 286 333361 - 333377 + g 73 -12.3 -3.30124 | CGCGATCCCATGTCG CCGTCTC AGC GAGACGG TTATCCGCAATCACG TERM 287 333712 - 333739 + g 78 -15.6 -2.75528 | gap 1, overlap 333710 CGCCCGCAACGTTCT CCGGTTCGGCGCG TGG CGCGC-GAGCCGG TCGTGTCTTGCCGGT Bphy_3401 334924 - 334208 - | hypothetical protein Bphy_3402 335682 - 334921 - | triple helix repeat-containing collagen Bphy_3403 337427 - 335679 - | triple helix repeat-containing collagen Bphy_3404 337795 - 337424 - | hypothetical protein Bphy_3405 338105 - 337782 - | HNH endonuclease TERM 288 338161 - 338123 - R 89 -17.6 -2.82623 | gap 1, opp_overlap 338119 338117, overlap 338128 CGGTCTCCAGAATGA CGAAAGCCCGCGACGGA ACAGGG TCCGT-GCGGGCTTCCG GTACTGCTTGCTTCT TERM 289 338156 - 338128 - R 87 -12.5 -3.86944 | gap 1, opp_overlap 338119 338117, overlap 338123 TCCAGAATGACGAAA GCCCGCGACGGA ACAGGG TCCGT-GCGGGC TTCCGGTACTGCTTG Bphy_3406 338852 - 338244 - | GP66 Bphy_3407 339085 - 338855 - | hypothetical protein Bphy_3408 339300 - 339046 - | hypothetical protein TERM 290 339147 - 339172 + gr 82 -13.3 -3.21099 | gap 1 GGATCGCGATCAGCG CGGCA-CGCGCG ATA CGCGCGATGTCG TTCATCGTCAGCGCG TERM 291 339238 - 339284 + gr 70 -5.9 -4.21933 | gap 2, overlap 339220 339216 339242 CAGCGCTTCGCGCAT GCG-GTCGTT-GTCATGCGCCAG ATG CTGGCGCATCGCGAGCGATTCGG TTGTTTTCCGGTTCA TERM 292 339242 - 339279 + gr 76 -12.1 -3.37556 | gap 1, overlap 339216 339238 GCTTCGCGCATGCGG TCGTT-GTCATGCGCCAG ATG CTGGCGCATCGCGAGCGA TTCGGTTGTTTTCCG Bphy_3409 339802 - 339308 - | endodeoxyribonuclease RusA TERM 293 339601 - 339640 + g 72 -11.4 -3.54424 | TCAGGATCACGCGCA CGGGTCCCGTCATGCGCA CGCG TGCCGATGGCGGGATCTG TTTCAGCGCGTCGCG TERM 294 339725 - 339760 + g 77 -9 -4.2558 | gap 1 GCCATCGGTCTTGCT GCGAACCTTGCGCGCGA CGA TCTCACGCGAG-TTCGC TTTTGATGCGGGCTC Bphy_3410 340266 - 339805 - | DnaB domain-containing protein Bphy_3411 340820 - 340272 - | hypothetical protein Bphy_3412 341724 - 340801 - | hypothetical protein TERM 295 341532 - 341501 - G 70 -8 -4.00124 | overlap 341502 TACTCGACAACGAAA CCACGCGTGACTAA CGCG TCAAGCACGCGTGA AAAATCAAGGTCATC Bphy_3413 341953 - 341738 - | phage transcriptional regulator, AlpA TERM 296 342458 - 342446 - H 83 -7.7 -4.56597 | opp_overlap 342437 CGGCCCCGTTAAAAA GCGTT TGA AACGC ATCAAAGTCGCAACT Bphy_3414 342813 - 343724 + | Phage-related protein endonuclease-like protein Bphy_3415 343717 - 344793 + | hypothetical protein Bphy_3416 344790 - 345248 + | hypothetical protein Bphy_3417 345245 - 345490 + | hypothetical protein TERM 297 345905 - 345865 - g 70 -11.7 -3.35073 | ATTACCGCGAAGGAA GGCGGGACGTGTGCATGCG TGG CGCGTGCGCAGATCCTGCC GAACCCCGACGAAAC Bphy_3418 345493 - 346017 + | hypothetical protein Bphy_3419 346010 - 346180 + | hypothetical protein Bphy_3420 346226 - 346630 + | hypothetical protein TERM 298 346681 - 346647 - f 88 -13.6 -3.68073 | overlap 346649 GATGTCATCGAAGAA CATCAAGCGGCGGGAA AAG TTCTCGCCGCCCGATA TCGGCACGTTGCCCG TERM 299 346679 - 346649 - f 83 -14 -3.41988 | overlap 346647 TGTCATCGAAGAACA TCAAGCGGCGGGAA AAG TTCTCGCCGCCCGA TATCGGCACGTTGCC Bphy_3421 347223 - 347495 + | hypothetical protein TERM 300 348490 - 348476 - g 72 -2.8 -4.64676 | opp_overlap 348489 CCATCGGGAACAAAA CTCATC ACT AACGAG CCGCTTCCGGCAATT Bphy_3422 347505 - 348611 + | hypothetical protein Bphy_3423 348742 - 349866 + | DNA methylase N-4/N-6 domain-containing protein TERM 301 350032 - 349988 - T 90 -18 -2.89921 | opp_overlap 350022 350023 350024, overlap 350025 AGCAAGTCTGATAGA CGGAGGCGCTC-GTCCGACCGC AAT GGGGTCGAACAGAGC-CCTCCG CAGAGATCTGCGAAG TERM 302 350050 - 350025 - T 79 -13.3 -3.06815 | opp_overlap 350024 350023 350022, overlap 349988 ATGGGGTCGAACAGA GCCCTCCGCAG AGAT CTGCGAAGGAC CTCATTCTCTTATGC Bphy_3424 351373 - 350060 - | integrase family protein Bphy_3425 351928 - 351638 - | hypothetical protein Bphy_3426 352427 - 352161 - | hypothetical protein TERM 303 352484 - 352506 + H 71 -12 -2.90688 | CGTGACCCGACTGAC GGCACGCG GCGCGAA CGCGTGCC TGTCTACGATCATTG TERM 304 353107 - 353122 + G 70 -4.6 -4.36914 | overlap 353063 GCGAGCCGACCGTCG TGCACG GCGG CGAGCA TTTTCTCGAGGCCAA TERM 305 353584 - 353594 + G 72 -8.2 -4.07568 | opp_overlap 353579, overlap 353561 GTGCTGAATACGCGG CGCG CCC CGCG TTTTCCGCCGACGCA Bphy_3427 352713 - 354659 + | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 306 354817 - 354785 - g 80 -11.9 -3.75024 | CCGCATGAGCAAGAA GAGCGGACCTACGCA GTA CGCGTCGAGCCGCTC GGCCGCACGTTCGAG Bphy_3428 354716 - 355105 + | ferredoxin Bphy_3429 355306 - 355109 - | hypothetical protein Bphy_3430 356020 - 355376 - | YheO domain-containing protein TERM 307 355964 - 355940 - G 85 -7.8 -4.62069 | gap 1, overlap 355943 CGCGTACGGGAAAAA CAGCGCGG-CG ATGC CGTCCGCGATG GGTGCGTAGCGGGTC Bphy_3431 357076 - 356111 - | ornithine cyclodeaminase/mu-crystallin TERM 308 358015 - 358000 - g 77 -11.8 -3.61398 | CGGCTTCCTGAACAA GCCGGC GGGC GCCGGC TTCGAGATCGTCGGC TERM 309 358158 - 358142 - g 72 -6.5 -4.2528 | opp_overlap 358156 GCCGAACTCAAGAAA GACGGCA CGC TGACGTC GCTCTCGCAGAAATA Bphy_3432 357422 - 358201 + | extracellular solute-binding protein TERM 310 358242 - 358259 + F 73 -12.7 -2.76453 | overlap 358234 358249 CTCCCCTATGGGCGA GCGCGTG GCGA CACGCGC TCGTTGCGCTTCTGG Bphy_3433 358334 - 359578 + | FAD dependent oxidoreductase TERM 311 360248 - 360225 - f 87 -14.6 -3.41051 | overlap 360238 CCAGCCCGACGACAA TGCTCGCGAC ACAC GCCGCGAGCA GCGTCCTGAACCAGC Bphy_3435 360333 - 360467 + | hypothetical protein Bphy_3436 361314 - 360547 - | hypothetical protein Bphy_3437 361560 - 361336 - | hypothetical protein Bphy_3438 361798 - 362373 + | phosphoglycerate mutase Bphy_3439 362784 - 362377 - | hypothetical protein Bphy_3440 362964 - 363182 + | hypothetical protein TERM 312 363501 - 363530 + F 100 -9.4 -4.88067 | gap 1 CCGGGTGACACTCGC TACGTTCGGTGCC CGCGC GGCACC-AGCGTA TTTTTCTCCATCCGT Bphy_3441 363705 - 363989 + | hypothetical protein TERM 313 363995 - 364012 + F 88 -14.1 -3.5489 | opp_overlap 363973, overlap 363992 CGATCTCTGATCGGG CGCGCCG CACC CGGCGCG TTGCTTTACCGTTGT TERM 314 364097 - 364077 - f 76 -12.5 -3.06696 | opp_overlap 364081, overlap 364035 CTGCCGCGCAAGACA TGCTGCGCG CCG CGCGCGGCA CCCTTCCCTCATCGA Bphy_3442 364126 - 364389 + | translation initiation factor IF-1 Bphy_3443 365238 - 364531 - | GntR family transcriptional regulator TERM 315 365393 - 365347 - H 93 -17.7 -3.34401 | opp_overlap 365348 365348 365354, overlap 365339 365354 AAAATAGCAGATCAA GCGAAAATGGTTAACCATTTT CCGTT AATATGGTTAACCATTTTCAC TAGCAAGGTATTGCC TERM 316 365354 - 365386 + H 82 -10.8 -4.18018 | opp_overlap 365339 365347 365354, overlap 365348 365348 CAGATCAAGCGAAAA TGGTTAACCATTTT CCGTT AATATGGTTAACCA TTTTCACTAGCAAGG TERM 317 365386 - 365354 - H 85 -10.8 -4.31085 | opp_overlap 365348 365348 365354, overlap 365339 365347 CAGATCAAGCGAAAA TGGTTAACCATTTT CCGTT AATATGGTTAACCA TTTTCACTAGCAAGG TERM 318 365683 - 365734 + G 90 -15.9 -3.54424 | gap 2, overlap 365677 GTGTGGTCGGCGAAG CGCGAGGCGT-CGC-GCTGGGATTG CTCG CGATCGCAGCCGCGTGCGCCGCGCG TTTCGCCGCGTCGAG TERM 319 366602 - 366626 + G 76 -6.3 -4.46212 | CGCCGTATGTATCGC CGCGATGATCG CGC TGACCTTCGCG TTTTCTCCTCGCAGC Bphy_3444 365409 - 366668 + | major facilitator transporter Bphy_3445 366960 - 367535 + | response regulator receiver/ANTAR domain-containing protein Bphy_3446 367546 - 368688 + | ABC nitrate transporter, periplasmic ligand binding protein TERM 320 368835 - 368795 - T 100 -4.7 -5.71712 | gap 1, opp_overlap 368829 TTGCAGACAAAAAAA CCGGCACCTCAATGCGCA GCAATA TACGCTTTAACG-GCCGG CAAGCCGTCCTTGCC Bphy_3447 369744 - 368803 - | choline ABC transporter, periplasmic binding protein Bphy_3448 370773 - 369796 - | AraC family transcriptional regulator Bphy_3449 371812 - 370907 - | choline ABC transporter, permease protein Bphy_3450 372977 - 371805 - | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 321 372727 - 372750 + g 80 -14.6 -3.14344 | gap 1, opp_overlap 372720 372722 TCGATAATGACCTTG CCGGC-CGTCG GTT CGACGAGCCGG TTGATGAGACGGATC TERM 322 374249 - 374213 - g 76 -9.4 -4.09739 | CGAAGCCTTCGAAAA CG-CGATCCGCACGAACG CTG CGATCG-GCGGTTCGACG AATGCCGTGGTGCAT Bphy_3451 373440 - 375152 + | dihydroxy-acid dehydratase TERM 323 375447 - 375407 - T 100 -17 -3.97331 | opp_overlap 375414 375418, overlap 375412 AACTGATGCAAAGAA CAAAAGAGGAAGGCGCAC GCAAT GTCCGCCTTCCTCCTTCG ACATCAGCGCAGAGC TERM 324 375442 - 375412 - T 100 -15.5 -5.011 | opp_overlap 375414 375418, overlap 375407 ATGCAAAGAACAAAA GAGGAAGGCGCAC GCAAT GTCCGCCTTCCTC CTTCGACATCAGCGC TERM 325 375414 - 375440 + T 73 -13 -2.72344 | opp_overlap 375412 375407, overlap 375418 GCAAAGAACAAAAGA GGAAGGCGCACG CAA TGTCCGCCTTCC TCCTTCGACATCAGC Bphy_3452 375713 - 375468 - | hypothetical protein TERM 326 375593 - 375626 + g 80 -14.5 -3.05384 | gap 1, overlap 375596 GTGCCGGTGCCGGTG CCGGTGCCGGC-GCCG ATG CGGCTGCCGGCGCTGC TTCCGTAGCGGCGGG TERM 327 375596 - 375623 + g 81 -17 -2.75064 | gap 1, overlap 375593 CCGGTGCCGGTGCCG GTGCCGGC-GCCG ATG CGGCTGCCGGCGC TGCTTCCGTAGCGGC Bphy_3453 377194 - 375896 - | TolC family type I secretion outer membrane protein TERM 328 376829 - 376790 - G 73 -12 -3.34894 | gap 1, overlap 376788 376791 AAGTGCTTCGAAATA CGCGCGCACGGCACGCAGC AGC GCGGCCTGCTGCGC-CGCG CCGACGTCGACGCCG Bphy_3454 379307 - 377187 - | ABC transporter related Bphy_3455 380515 - 379313 - | hypothetical protein TERM 329 379672 - 379640 - G 71 -12 -3.18264 | gap 1, opp_overlap 379660 379671, overlap 379641 CCCCGTATGCACGAA GCCGCGCCGGCGC GACGGCAT GCG-CAGCGCGGC GCGCAGCGCGCTTCT Bphy_3456 381542 - 380559 - | hypothetical protein TERM 330 381124 - 381142 + g 71 -10.2 -3.5774 | overlap 381125 381127 ACGATGACGGGAGAT CCAGGCGC ATC GCGCCTGA TTTGCCCGATTGCCT TERM 331 381125 - 381141 + g 71 -13.7 -2.74322 | overlap 381124 381127 CGATGACGGGAGATC CAGGCGC ATC GCGCCTG ATTTGCCCGATTGCC TERM 332 381574 - 381553 - H 100 -17.3 -3.67976 | GGCATGAAGTGCAAA GCCCCACGC CTGC GCGTGGGGC TCATCGGACAACGTT Bphy_3457 381816 - 382061 + | hypothetical protein Bphy_3458 382927 - 382205 - | hypothetical protein Bphy_3459 383200 - 383859 + | two component LuxR family transcriptional regulator TERM 333 383905 - 383847 - T 100 -24 -4.26076 | opp_overlap 383861 383863, overlap 383848 GTATGCGCAGGAAAA TGGCTTGACGTGAAAAGGGCTGCTCGCA GCC CGCGAGCAGCCCTCTTTGCATCAAGCCC GTGGTTGGCGTCAGA TERM 334 383904 - 383848 - T 100 -27.5 -3.15324 | opp_overlap 383861 383863, overlap 383847 TATGCGCAGGAAAAT GGCTTGACGTGAAAAGGGCTGCTCGCA GCC CGCGAGCAGCCCTCTTTGCATCAAGCC CGTGGTTGGCGTCAG TERM 335 383861 - 383891 + T 100 -16.9 -3.64703 | opp_overlap 383848 383847, overlap 383863 ATGGCTTGACGTGAA AAGGGCTGCTCGC AGCCC GCGAGCAGCCCTC TTTGCATCAAGCCCG TERM 336 383863 - 383889 + T 100 -19.5 -3.40597 | opp_overlap 383848 383847, overlap 383861 GGCTTGACGTGAAAA GGGCTGCTCGC AGCCC GCGAGCAGCCC TCTTTGCATCAAGCC Bphy_3460 384926 - 383916 - | rhamnose ABC transporter, periplasmic rhamnose-binding protein TERM 337 384899 - 384917 + g 72 -6.6 -4.329 | opp_overlap 384890, overlap 384902 CGCAAAGCAGCATCG CTCCTGCG TGA CGCAGTGG TTTGTTCATCTCTTG Bphy_3461 386022 - 384994 - | monosaccharide-transporting ATPase TERM 338 385121 - 385156 + g 77 -4.7 -4.65895 | gap 1, overlap 385108 385122 CCCGTGACGATGGTC AGCGTT-TCGCTCGAT ACGTC GTCGAGCGTCAACGCA TTTTTCAATACGCCG Bphy_3462 387076 - 386015 - | monosaccharide-transporting ATPase TERM 339 386984 - 387032 + g 72 -13 -3.08679 | gap 1 GCGGCTCTTTGCGAG CGCGCCGACGAGGC-CGCCCG GCCCGGAG CGGGTGTGCCGCAGCGGCGCG TGTTCGATCGACGCC Bphy_3463 388623 - 387073 - | ABC transporter related Bphy_3464 389565 - 388672 - | amidohydrolase 2 TERM 340 388698 - 388714 + g 75 -2.9 -4.84359 | opp_overlap 388686 388687, overlap 388699 AAAGGCGCTCGGCGT TGCGC ACGAACA GCGCG TTTTTCTCGGCGTCG TERM 341 388924 - 388948 + g 71 -12.1 -3.23711 | GCTGATCTTCACGGC GACGTTCGGGC ACT GCGCGAGCGTC TTCATCCCTTCTCGC TERM 342 389323 - 389351 + g 81 -11.6 -4.15222 | CGCGCGCGAACCCGC CGCGCCGGCTAC CTCTT GCAGCCAGCGCG TTTCTTCGACGGGAT Bphy_3465 389936 - 389610 - | hypothetical protein TERM 343 390344 - 390366 + G 76 -6.3 -4.57837 | gap 2, overlap 390318 CTGGCGTATGCACGG CGCG-C-GCTC GCG GAGCTGACGCG TTTTTCCGAGGATCT Bphy_3466 390098 - 391063 + | LysR family transcriptional regulator TERM 344 391083 - 391112 + T 82 -10.7 -4.12899 | gap 1, overlap 391074 CTTTTATCTGCGACG CCGAGTTTGGCCGC GGC GCGGCCGG-TTCGG TTCTTTGCTTGTGCT TERM 345 391179 - 391203 + T 75 -8.4 -3.96148 | CGTTGCTCTCTCGTG CGGGGCAGCG CGCGT CGCCGCGCCG TTTGTGCTGCGGGCC Bphy_3467 392106 - 391324 - | short-chain dehydrogenase/reductase SDR Bphy_3468 393299 - 392121 - | mandelate racemase/muconate lactonizing protein Bphy_3469 394671 - 393340 - | major facilitator transporter TERM 346 393667 - 393625 - G 72 -13.2 -3.14132 | overlap 393604 CTGCGCCGCGATGAA GCCGCTCGCCGCACAGCACA GCG CGAGCAGCGCGGAGAGCGGG CTGTGCGCGAGACCC TERM 347 394242 - 394228 - G 71 -9.2 -3.81488 | overlap 394230 CGCGCCGAAATAGAA CACGCC GAC GGCGCG CGCACGCGCCGATTG TERM 348 394702 - 394723 + r 72 -6.5 -4.30576 | overlap 394703 CTTGGTGCGAAAGCC GGGTGGCAT GTCT ATGCCGCCA TTTTCATGATCGCGG Bphy_3470 395497 - 394745 - | short-chain dehydrogenase/reductase SDR TERM 349 395605 - 395595 - H 71 -6.8 -4.21607 | TGTACGCAATATAAA TCGG TGA CCGA TACGTGAACAATTCG TERM 350 396075 - 396050 - H 100 -14.7 -5.81412 | CGCAGGCAAAAAAAA GCCCCGGATTC TTGC GAAACCGGGGC GAATCCCATGTCGAG Bphy_3471 396300 - 397019 + | NADPH-dependent FMN reductase TERM 351 397045 - 397076 + F 82 -10.1 -4.19258 | opp_overlap 397045 397046, overlap 397046 CTCTCGTGCTTCAAA TGCCATGCGCTGC TTCGAT GCCGTGCATGGCG TTTTGCGTGCGATAT TERM 352 397530 - 397513 - g 89 -4.7 -5.1101 | overlap 397514 TCACGATCGAAAAAA CGACGCC CGCC AGCGGCG CCCATGCGTACTCGT Bphy_3472 397353 - 397634 + | hypothetical protein Bphy_3473 397774 - 398682 + | hypothetical protein TERM 353 399272 - 399302 + G 77 -14.7 -2.87132 | gap 1 TCGCGGGCGGTTCAT CGGGCGGC-ACGGC CGTG GCCGTCGCCGCGCG TATCTCGCCCGCCGG TERM 354 400032 - 400002 - g 74 -12.7 -3.21199 | CATCGATGAAGTGAA CG-GCTCGTCGATCG TGT CGATCGACG-GCGCG CCCGCCATCGAGGAA Bphy_3474 398791 - 400245 + | amidase TERM 355 400401 - 400372 - g 73 -14.9 -2.52516 | opp_overlap 400371 400367, overlap 400358 400371 TCGTCGACCACCAAT GCGTGCCCGCCGC CCGC GCGTCGGGCAGGC CTGGCTTCTGCACGT Bphy_3475 400254 - 401003 + | CDP-diacylglycerol diphosphatase Bphy_3476 401125 - 402231 + | fatty acid desaturase Bphy_3480 403844 - 404236 + | integrase/recombinase Bphy_3482 407217 - 404887 - | organic solvent tolerance protein TERM 356 405554 - 405566 + g 71 -9.1 -3.72576 | CGTGACGTCAGCGCA GCCGT CAC ACGGC TTTCATCGGACACAC TERM 357 407031 - 407048 + g 74 -10.5 -3.69333 | overlap 407042 TCGTCGCGGCTTTGA CGCCCGG CACA CTGGGCG TTTCGGTCAGTTGTG Bphy_3483 407688 - 407284 - | hypothetical protein Bphy_3484 407884 - 407681 - | hypothetical protein TERM 358 408030 - 408009 - H 71 -12.9 -2.60496 | opp_overlap 408008 408007, overlap 408008 408006 GGCGCCGCTAAACAC GCGCCGCTG CACA CTGCGGCGC CATTCCTTTCACGCC TERM 359 409449 - 409463 + G 83 -2.7 -5.1356 | overlap 409448 409449 GCCGACAGGGGCAAT CACGC TGGGC GCGGG TTTTTCTTCGTCGGA Bphy_3485 408148 - 410457 + | outer membrane protein assembly complex, YaeT protein TERM 360 410509 - 410541 + T 74 -6.8 -4.2558 | overlap 410510 410512 TTTATTGCGGGTGCT TCACGCGTCGCCCC TGTGC GGGGCGGCGCCTAC TTTTAGTCCGCAGTG TERM 361 410512 - 410538 + T 76 -12.9 -3.13504 | overlap 410510 410509 ATTGCGGGTGCTTCA CGCGTCGCCCC TGTGC GGGGCGGCGCC TACTTTTAGTCCGCA Bphy_3486 412184 - 410682 - | RND efflux system outer membrane lipoprotein TERM 362 411349 - 411339 - G 72 -8.2 -4.18762 | overlap 411340 AACCGGCAGCGAAAA CGCC GCG GGCG GCTCGCCGAGCAGCA Bphy_3487 415291 - 412181 - | acriflavin resistance protein TERM 363 414248 - 414236 - G 87 -5.5 -5.02074 | overlap 414247 CCAGTCGCGAAAAAA CGCGT ACG ACACG GCCGTCACCAGCAGC TERM 364 414697 - 414652 - G 71 -11.8 -3.25823 | gap 1, opp_overlap 414695, overlap 414653 CCTTCGGCAGATCAA CGC-TCGCGTTCGCCAGCGCG GTGCG CACGCTGTCGAGCGCGATGCC GTAGCGGCTCAGTTG TERM 365 414696 - 414653 - G 74 -15.3 -2.55351 | gap 1, opp_overlap 414695, overlap 414652 CTTCGGCAGATCAAC GC-TCGCGTTCGCCAGCGCG GTGCG CACGCTGTCGAGCGCGATGC CGTAGCGGCTCAGTT TERM 366 415094 - 415124 + g 75 -12.5 -3.53012 | overlap 415095 TGCTCGTTCAAGCGG CGCCGTCACGGTC TTTGC GACCGTGTCGGAG TTTGCACCCGACAGC Bphy_3488 418439 - 415299 - | acriflavin resistance protein TERM 367 416127 - 416113 - G 78 -10 -4.00445 | GACGACGAAGAAGAA GACGAG GCG CTCGTC GTCCCCACATACAGC Bphy_3489 419610 - 418465 - | RND family efflux transporter MFP subunit TERM 368 419686 - 419663 - R 88 -10.3 -4.4959 | gap 1, overlap 419664 CGGAAGGAATGAAAA GGACGACGCC GCGAG GGCGTCG-CC GGAAATCGGCACTGC TERM 369 419686 - 419664 - R 79 -12.7 -3.29031 | overlap 419663 GGAAGGAATGAAAAG GACGACGCC GCGAG GGCGTCGCC GGAAATCGGCACTGC TERM 370 419728 - 419717 - R 76 -7.2 -4.46212 | overlap 419693 419692 419719 GCCGCCAGGAGAAAA CGGC GAGT GCCG CGCAGGTGAGGGGAA Bphy_3490 421311 - 419800 - | RND efflux system outer membrane lipoprotein Bphy_3491 424481 - 421323 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 371 424254 - 424283 + g 72 -12.9 -3.06915 | opp_overlap 424250, overlap 424256 GCTCGACGACATGTA CAGCAGATGGTCG AGAC CGCTCATCTGCTG TTCGATCACCTGCGT Bphy_3492 425713 - 424496 - | RND family efflux transporter MFP subunit TERM 372 425377 - 425350 - G 74 -14.8 -2.62396 | opp_overlap 425371 425373 425374 CATGTGCGGAGACCA GCGTCGCCTGCG CCTT CGCAAGCGTCGC CTTCGCGCTGTTCAG TERM 373 425373 - 425420 + g 70 -11.2 -3.32294 | gap 1, opp_overlap 425350, overlap 425371 425374 425416 TGCGCCTTCGCAAGC G-TCGCCTTCGCGCTGTTCAGCG ATG CGATGTACGGCGCGGGGTCGATC TTGTAGAGCGTTTGC TERM 374 425374 - 425418 + g 83 -14.9 -3.22668 | opp_overlap 425350, overlap 425371 425373 425416 GCGCCTTCGCAAGCG TCGCCTTCGCGCTGTTCAGCG ATG CGATGTACGGCGCGGGGTCGA TCTTGTAGAGCGTTT Bphy_3493 425910 - 426545 + | TetR family transcriptional regulator Bphy_3494 426795 - 427565 + | two component transcriptional regulator Bphy_3495 427562 - 428815 + | integral membrane sensor signal transduction histidine kinase Bphy_3496 429155 - 428901 - | hypothetical protein Bphy_3497 430089 - 429319 - | ABC transporter related TERM 375 429487 - 429432 - G 78 -3.9 -4.82901 | opp_overlap 429446 429447, overlap 429447 CGCCGTCCAGAAAAA CGCCGTCATCGCAAATGCCGAACAG ACTCGG CAGTTCGTGGCTCACGATGACGACA GTTGCGCCGAGACCC Bphy_3498 431242 - 430094 - | hypothetical protein TERM 376 430990 - 431002 + g 70 -4.7 -4.386 | CGTCGATTTCGAACG GGCGG GTC CCTCC TTTTCTGACCGATTC Bphy_3499 431728 - 432702 + | hypothetical protein Bphy_3500 432699 - 433337 + | hypothetical protein Bphy_3501 433568 - 434425 + | amino acid transporter-like protein TERM 377 434836 - 434851 + G 70 -2.4 -4.64598 | opp_overlap 434808 434824 434823, overlap 434836 AAGGCGATCACCGAG CGCGTG AATC CGCGAG TTTTTCGGGTCGTTG TERM 378 435365 - 435338 - g 70 -5.6 -4.25283 | gap 1, opp_overlap 435338, overlap 435339 ATCTGCTCAGCAAAA TTCCGTACGAGGC TTT GCCGCGTA-AGAA GGTTTCGTTGCCCAA Bphy_3502 434626 - 435447 + | hypothetical protein Bphy_3503 435639 - 436424 + | TrkA domain-containing protein Bphy_3504 436805 - 438535 + | sulphate transporter Bphy_3505 441815 - 438726 - | acriflavin resistance protein TERM 379 438985 - 439000 + g 71 -10.4 -3.57263 | ACCGCTGTCCAGGTG TCGCGC CCCT GCGCGA TTTCCGCCTGCACCT TERM 380 440470 - 440423 - G 70 -5 -4.43844 | gap 3 CGACGATCCAGAAAA TGCCGCCCGCGTATTCGCC-AGT AGTAG ACTTGGCGAAC-C-CGATCGGCA TGAAGGCAGCGGCTG Bphy_3506 442906 - 441812 - | RND family efflux transporter MFP subunit Bphy_3507 444375 - 442903 - | RND efflux system outer membrane lipoprotein TERM 381 444012 - 444025 + g 79 -6.7 -4.57073 | CTCGCGTATTTGCCG CTTCG GGAA CGAAG TTTTTGAGGACGGTA TERM 382 444372 - 444393 + g 71 -10.1 -3.56273 | opp_overlap 444346 CTGCGCTGCGCCCTG CCACCTCAC CACG GCGAGGTGG TTGTCTCATCGTCCG Bphy_3508 445342 - 445040 - | hypothetical protein Bphy_3509 446112 - 445372 - | OmpW family protein TERM 383 446454 - 446442 - R 73 -3.3 -4.7497 | GTGATGGACGAAAAA CAGCC AGA GGTTG GTCGAAGGCATTGCT Bphy_3510 447569 - 446520 - | 4-hydroxy-2-oxovalerate aldolase Bphy_3511 448528 - 447581 - | acetaldehyde dehydrogenase (acetylating) TERM 384 447691 - 447714 + g 76 -9.7 -4.07568 | opp_overlap 447680, overlap 447682 GATAGTGAGCCGCGC CCTCGATTT CGAGGT AAATCGAGG TTTTGAGGCCGACCA Bphy_3512 449334 - 448525 - | 4-oxalocrotonate decarboxylase Bphy_3513 451123 - 449360 - | monooxygenase FAD-binding Bphy_3514 452130 - 451120 - | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_3515 453036 - 452155 - | alpha/beta hydrolase fold protein TERM 385 453223 - 453194 - g 88 -17.9 -3.10343 | gap 1, opp_overlap 453182, overlap 453182 453180 ACATCGATCATCGAA CCCGCGTCGCGGCG GAG CGCCGCGA-GCGGA TGCGCGCAAGACTTA Bphy_3516 453163 - 453870 + | TetR family transcriptional regulator Bphy_3519 456011 - 455490 - | hypothetical protein Bphy_3520 458373 - 456358 - | alpha amylase catalytic region TERM 386 456715 - 456703 - G 75 -10.5 -3.85698 | opp_overlap 456699 TCGCCCCGTCAGAAA GCGCC GTC GGCGC AGACTTGCGTGACGC TERM 387 456940 - 456906 - G 84 -6.4 -4.82901 | overlap 456909 456920 CCTGGCTCAGAAAAA GTATGGCCATCAGA TTGCGGG CCTGACGGCCACGC AGTTGCACGATTCCC TERM 388 458867 - 458878 + r 75 -5.8 -4.62069 | overlap 458842 GGGTTGCCCCTGATC GCGA GGCT TCGC TTTTTCGGGTGCGAC Bphy_3524 460870 - 460307 - | TetR family transcriptional regulator TERM 389 461128 - 461101 - R 88 -16.3 -3.05816 | GCAGCGCCGACCGAA GCCAGCGGCAG CACCTT CTGCCGCCGGC CCAGGCAGTGGCCTG Bphy_3525 462018 - 461155 - | pyrogallol hydroxytransferase Bphy_3526 465007 - 462029 - | molybdopterin oxidoreductase TERM 390 462709 - 462727 + g 76 -6 -4.56597 | opp_overlap 462698, overlap 462698 ACCAGCGCATATCCA CTGGAGAT CGC ATTTCCGG TTTTTCGGGCGGCAC TERM 391 463650 - 463665 + g 72 -6.8 -4.2704 | overlap 463651 AGGGCCCGAACGTCT TTGGCG GGCA CGCCAG TTTCTTGCTCCTGCC Bphy_3527 466031 - 465117 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 392 465579 - 465566 - G 76 -5.9 -4.52589 | overlap 465567 GGTCCGGAGAGAAAA CGGCC ACAT GGCCA AACCGCTGAATGTGC Bphy_3528 466848 - 466108 - | OmpW family protein TERM 393 466823 - 466803 - G 77 -11.1 -3.68738 | opp_overlap 466800 CAGCCGAACAGATAA GACCTGCCA TCA CGGCAGGCC GAACATTTTTCCTGT Bphy_3529 467375 - 467124 - | hypothetical protein Bphy_3530 469471 - 467483 - | AMP-dependent synthetase and ligase Bphy_3531 470424 - 469468 - | fumarylacetoacetate (FAA) hydrolase Bphy_3532 471530 - 470460 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 394 471356 - 471346 - G 74 -2.4 -4.75372 | ACGACGTAGCAAAAA TGCG AGG CGCC TGTACCACGTAGCAG Bphy_3533 471994 - 472707 + | TetR family transcriptional regulator Bphy_3534 473858 - 473097 - | hypothetical protein Bphy_3535 475450 - 473855 - | hypothetical protein Bphy_3536 476857 - 475508 - | PqiA family integral membrane protein TERM 395 476696 - 476672 - G 71 -4.1 -4.52589 | overlap 476673 CTGCGCGATACAAAA GGTGACGAGCG CAG CGAGCGTCACT GCGCAGATCGGGTCA Bphy_3537 478445 - 476982 - | RND efflux system outer membrane lipoprotein TERM 396 477182 - 477231 + g 83 -15 -3.28712 | gap 2, opp_overlap 477217 477219, overlap 477153 477184 TATCGTCGAATGCCG CG-CGCGC-GGCGTCTGCGGCCAC TTCC GTCGAAGCAGACGCCTGCGCGTCG TTATCCAGCGCGGCA TERM 397 477184 - 477228 + g 84 -16.4 -2.82623 | gap 1, opp_overlap 477217 477219, overlap 477153 477182 TCGTCGAATGCCGCG CGCGC-GGCGTCTGCGGCCAC TTCC GTCGAAGCAGACGCCTGCGCG TCGTTATCCAGCGCG TERM 398 477678 - 477734 + g 71 -10.7 -3.64703 | gap 1, opp_overlap 477709, overlap 477681 CAGCGTGTGGATTGC CAGCGCGCG-CTGCTGGCGCAGCGCC GGTAAA GTCGCCGCGATGGCAGCCGCGTCCTG TTTCGATGCGAGCGC Bphy_3538 481621 - 478448 - | acriflavin resistance protein TERM 399 478594 - 478543 - G 75 -4.3 -4.71426 | gap 1, overlap 478544 CTGGCAGGAAGAAAA CCGTCAGCATCGTCGC-GATGG TGATGCCGC CCATCAGCGCCGTCGCCATCGG TCCGAAGAAGCCCGA Bphy_3539 482796 - 481618 - | RND family efflux transporter MFP subunit Bphy_3540 483026 - 483778 + | TetR family transcriptional regulator TERM 400 484308 - 484297 - T 84 -7.2 -4.8667 | TATAGGGGATAAAAA CCGC GAGC GCGG TGAGCAGGCCGATAG Bphy_3544 486849 - 486352 - | MarR family transcriptional regulator TERM 401 486402 - 486415 + g 74 -2.3 -4.8048 | overlap 486403 GAACCGCGGTTCCGC TCAGG TCAT CCTGC TTTTTCATGTCCCGC Bphy_3545 487857 - 487051 - | short-chain dehydrogenase/reductase SDR TERM 402 489215 - 489205 - R 76 -4.6 -4.72986 | overlap 489206 CATCGCCAGGAAAAA GCGC GGC GCAC CCTGCCCGACGTAGG TERM 403 490646 - 490664 + r 93 -5.2 -5.40474 | overlap 490631 490637 490649 ACGCCGGCCGGCAGG TTGGCGGC TTC GTCGCTGA TTTTTTTCCGCGCCT Bphy_3547 492134 - 491019 - | RND family efflux transporter MFP subunit Bphy_3548 492840 - 492217 - | TetR family transcriptional regulator Bphy_3549 492911 - 494371 + | RND efflux system outer membrane lipoprotein Bphy_3550 495207 - 494485 - | short-chain dehydrogenase/reductase SDR Bphy_3551 495919 - 495260 - | metal dependent phosphohydrolase Bphy_3552 496100 - 497509 + | transcriptional regulator TERM 404 497696 - 497653 - g 72 -13 -3.06969 | CAATCCATCGCAAGA GCCGCCTGCACAGCCATGGC CTTC GCCATCGCCGTGCCCGCCGC GGCGCACGGTGCGGC Bphy_3553 497629 - 498072 + | cupin 2 domain-containing protein Bphy_3554 498069 - 498524 + | alkylhydroperoxidase Bphy_3555 499019 - 499792 + | metal dependent phosphohydrolase TERM 405 502014 - 501984 - g 81 -11.1 -4.07868 | gap 1 GCACAGGCACAGAAA CCG-GACGAACCGC GCAC GCGGCTCGGCGCGG CTGCATGAAGACACG Bphy_3557 500832 - 502022 + | glycosyl transferase family protein TERM 406 502875 - 502844 - g 100 -22.4 -4.2349 | overlap 502865 CCGCCAGATGGAAAA CGAGGCGCGCATAG CCAA CTACGCGCGCCTCG CATGACGTCCGGCCC Bphy_3558 502092 - 502880 + | putative ABC phosphate/phosphonate transporter, periplasmic ligand binding protein Bphy_3559 504929 - 502917 - | carbamoyl-phosphate synthase L chain ATP-binding Bphy_3560 505775 - 504990 - | enoyl-CoA hydratase/isomerase Bphy_3561 507407 - 505800 - | propionyl-CoA carboxylase TERM 407 507242 - 507201 - G 73 -9.9 -3.88787 | opp_overlap 507229 507232 CGACAGTTCGAGAAA CGGCGTGCCCGGATCGAGC AGTT GCGCGATGCGGTCGCGCGG CAGCAGCTTGCCACG Bphy_3562 508608 - 507427 - | acyl-CoA dehydrogenase domain-containing protein TERM 408 508653 - 508672 + H 72 -4.9 -4.63218 | overlap 508654 CTTACATCGCGCAAG CGGCCTG TCGCAT CAGGCCA TTTTCTTGAGCCGGG TERM 409 508773 - 508800 + H 79 -7 -4.71061 | overlap 508775 TAAAGCGCATTTCAC TCCAGATTGACG TATG CGTCAATCGGTA TTTTTGAGTGTCACT TERM 410 508775 - 508798 + H 78 -9.6 -3.96999 | overlap 508773 AAGCGCATTTCACTC CAGATTGACG TATG CGTCAATCGG TATTTTTGAGTGTCA Bphy_3563 508908 - 509672 + | TetR family transcriptional regulator TERM 411 509722 - 509705 - f 78 -8.3 -4.42806 | GCAGGTGTAAACAAA CGCGCCC GGCC GGGTGCG CAACTTGCTGACGCA TERM 412 510280 - 510298 + G 71 -10.2 -3.57144 | TGGGCAAGCACTATG TCGCCGTG CCG CTCGGCGA TTTGCAGATCACAGC Bphy_3564 509976 - 510389 + | PRC-barrel domain-containing protein TERM 413 510417 - 510457 + T 76 -11.7 -3.41988 | overlap 510415 510419 GCGCGCCTGGTCTGT GTCACGGCCGCTGCATACG ATG CGTGCAAAGCGGCCGTGTC TGTTCTTCGATCAGC TERM 414 510419 - 510455 + T 79 -12.9 -3.27902 | overlap 510417 510415 GCGCCTGGTCTGTGT CACGGCCGCTGCATACG ATG CGTGCAAAGCGGCCGTG TCTGTTCTTCGATCA TERM 415 510604 - 510582 - T 71 -11.2 -3.21099 | CGGCGCGATCACGAA GCGCCCCGCA ACC CGCGAAGCGC CGGTGCCCGATGCGC Bphy_3565 511233 - 510649 - | hypothetical protein TERM 416 510997 - 510952 - G 76 -14 -3.05384 | opp_overlap 510967 510989, overlap 510954 CGCCGCCGCACCGAA CAGCGC-GCCGACGGCTGCGCC GCCC AGCGTA-CCGACGGCCGCGCTG CCCGCCGCATTGTTC Bphy_3566 511443 - 511976 + | MarR family transcriptional regulator TERM 417 511994 - 512011 + T 71 -10.5 -3.54475 | overlap 511987 512002 512005 GTGCCCCACACCCGC GCCGTCG GGCG CGGCGGC TTATATCGTGGGCGC TERM 418 512024 - 512055 + T 74 -13 -2.88544 | opp_overlap 512049 512051, overlap 512002 512005 GGCTTATATCGTGGG CGCGCTGTTTCCCG GCGG CGCCAAACAGCGCG TATATCGCGCTCGGC TERM 419 512135 - 512108 - T 86 -14.8 -3.18383 | overlap 512117 512118 ACCTGCAGCGACCAA CGGGCGAAACGC CGCC GCGCGTCGCCCG CATATCAACGCAGAC Bphy_3567 513633 - 512140 - | aldehyde dehydrogenase TERM 420 512553 - 512500 - G 74 -11.5 -3.58726 | gap 1, opp_overlap 512511 512517 512521 CGGTTCGATATAGAA GCCGCCGCTTTCCTGCTGCACGCGCG CGC CGC-CGTGCAGCAGCTTCGCTTCGGC GCGCCCTGCTTCGAT TERM 421 512511 - 512542 + g 80 -15.2 -3.17075 | gap 1, opp_overlap 512500, overlap 512517 512521 AGAAGCCGCCGCTTT CCTGCTGCACGCGCG CGC CGC-CGTGCAGCAGC TTCGCTTCGGCGCGC Bphy_3568 514001 - 513657 - | transcriptional regulator Bphy_3569 514384 - 514608 + | hypothetical protein Bphy_3570 514666 - 514911 + | hypothetical protein Bphy_3571 514959 - 515702 + | peptidase C26 Bphy_3572 515735 - 517069 + | glutamate--putrescine ligase Bphy_3573 517129 - 518565 + | aminotransferase class-III TERM 422 519485 - 519525 + G 78 -7.4 -4.38154 | gap 1 GCGGAATTGATGCGC CGCGTGCTGCCGCCCGCCG AGTT CGACGGCTGGTT-CACGCG TTTTCTGCCCGGTCT Bphy_3574 518798 - 519808 + | hypothetical protein Bphy_3575 520171 - 519902 - | hypothetical protein TERM 423 520070 - 520097 + g 71 -7.7 -4.07885 | overlap 520056 CCGCTCGAGCGCGTC GCGCGTAATCG AGCATC CTATTGCGCGC TTTTGCACGACGATG TERM 424 520432 - 520456 + r 78 -9.1 -4.2349 | CCCGCCATTTTCTCG CGCCGTTGCGC CAC GCGCTGCCGCG TTTTCCATCTGAGGA Bphy_3576 521162 - 520626 - | hypothetical protein Bphy_3577 521338 - 521745 + | hypothetical protein TERM 425 521735 - 521751 + F 74 -13.7 -2.50816 | overlap 521734 TCCGCAATGCGCCGC GTCGCGC GTA GCGCGAC CTTGATGCCTGGAAC TERM 426 522479 - 522467 - g 70 -4.7 -4.36914 | GGCCGGCGCAGAAAA GACGC TGC GCGAC GAGATTCTCAAAGGC Bphy_3578 521892 - 522788 + | fructose-bisphosphate aldolase TERM 427 522800 - 522837 + T 87 -16.9 -2.73364 | CTGAGCGGCATGTGC ACGCGAGGCCGCGCGCC ATCG GGTGCGCGGCTTCGCCA TGCTTCGCATCAGCG Bphy_3579 523327 - 522860 - | PRC-barrel domain-containing protein TERM 428 523582 - 523566 - H 85 -10.8 -4.39568 | overlap 523568 ATGGACACATGAAAA CGCGCG ACGGG CGCGCG TCGCAGGAGAACTGG Bphy_3580 523599 - 523787 + | hypothetical protein Bphy_3581 525213 - 523792 - | transcriptional regulator Bphy_3582 526815 - 525283 - | major facilitator transporter TERM 429 526519 - 526501 - G 71 -12.4 -3.2794 | CGCGATGTAGAGCAA CGTCGCGC TAC GCACGACG CTGCATGCGAGCGAG TERM 430 526643 - 526632 - G 72 -3.6 -4.64861 | GCGCGGCAAAACAAA GCAC GTAG GCGC TGATCACCCATTCGA TERM 431 527790 - 527780 - g 74 -2.4 -4.72272 | GCCCGCCACGAAAAA GCTC ATC GCGC AGATCACGGGTGCGC Bphy_3583 526938 - 527816 + | LysR family transcriptional regulator Bphy_3584 528035 - 528295 + | hypothetical protein TERM 432 528506 - 528473 - T 72 -5.3 -4.47328 | gap 1 AACGGCACGAGAAAA GAAAAGAGGCCAGACA GCA CG-CTCGCCCCCTTTC TCCTCGCTCAGGCCG Bphy_3585 529098 - 528523 - | histone family protein nucleoid-structuring protein H-NS TERM 433 529040 - 529060 + g 93 -5.3 -5.37345 | TTTTTCGACACGATG GCTTCTGCC TGG GCCTGAAGC TTTTTTATCCTTGCC TERM 434 529513 - 529544 + r 77 -13.7 -2.9462 | gap 1, opp_overlap 529513, overlap 529510 529515 GACGCACGCAAGAAA GAGCCGGG-GCCGC ACGCG GCAGCACCCGGCTC TCATTTGAATCGGTA TERM 435 529544 - 529513 - R 100 -15.9 -4.2123 | gap 1, opp_overlap 529510 529513 529515 GACGCACGCAAGAAA GAGCCGGG-GCCGC ACGCG GCAGCACCCGGCTC TCATTTGAATCGGTA Bphy_3586 529917 - 529570 - | hypothetical protein TERM 436 529935 - 529902 - G 89 -15.2 -3.75153 | opp_overlap 529924 TCCCTTCAAGGCAAA CGGGGCCGTCGCGC ACTTAG GCGCGACGGCGCGG CGCCGTAGCTTCCGT TERM 437 529924 - 529944 + r 76 -12.5 -3.17075 | opp_overlap 529902 GTCGCGCACTTAGGC GCGACGGCG CGG CGCCGTAGC TTCCGTTAGCACGCC Bphy_3587 530337 - 529972 - | response regulator receiver protein TERM 438 530229 - 530266 + g 74 -10.5 -3.71848 | TCAGCTTCGCCAATC CGTCCTTGCCGTCGACA GCCG TGTCGACATCGAGGCCG TTCTTCCTCAGAAAG Bphy_3588 530969 - 530430 - | hypothetical protein Bphy_3589 531706 - 530966 - | methyl-accepting chemotaxis sensory transducer TERM 439 531193 - 531179 - G 72 -7 -4.21194 | opp_overlap 531189 CGCGACGATCGAAAA GCCGCG CCC CGCCGC ACCTGCGCGTGCGGC Bphy_3590 534113 - 531723 - | putative CheA signal transduction histidine kinase TERM 440 532862 - 532885 + g 75 -11.8 -3.53091 | gap 1, overlap 532877 GGAACTTCTCTTCGT TGA-CGGCGAG AAT CTCGCCGATCA TTTCGAGCCGGCGCT Bphy_3591 535282 - 534347 - | ribonuclease BN TERM 441 534677 - 534664 - G 72 -6.7 -4.30576 | CCGTCAGCACGAAAA TCTCG CCGG CGAGA CCGAACAGATACAGC TERM 442 535912 - 535899 - g 72 -6.7 -4.30576 | opp_overlap 535899 GCCTGATCACGAAAA CGGAT ACCA ATCCG TTCTTCGTGAAGATG Bphy_3592 535745 - 536773 + | monosaccharide-transporting ATPase TERM 443 536802 - 536836 + F 86 -14.2 -3.30124 | opp_overlap 536806 GCAGTAATCGTGCAG CAAACGGAGATGCGCG CGG CGCGCATCTCCGCGAG TTCTCCCGCATGAAG TERM 444 536832 - 536806 - f 100 -22.4 -3.737 | opp_overlap 536802 TAATCGTGCAGCAAA CGGAGATGCGCG CGG CGCGCATCTCCG CGAGTTCTCCCGCAT Bphy_3593 536894 - 537883 + | monosaccharide-transporting ATPase Bphy_3594 537907 - 538707 + | ABC transporter related Bphy_3595 538711 - 539961 + | ROK family protein TERM 445 540081 - 540048 - T 83 -4.5 -5.09225 | gap 1, overlap 540051 540052 ATGCCAGCGAAAAAA CTAT-CGGGACGCAGT GGT ACTGCCACCCGCATCG GTAGACGGATCCAGT Bphy_3596 543107 - 540048 - | glycosyl transferase family protein TERM 446 542757 - 542744 - G 71 -3.7 -4.4959 | opp_overlap 542753, overlap 542745 CGTAAGGAATGAAAA GGCCG TCGT CGGCG AGTGACGCCATGCGT TERM 447 544570 - 544604 + G 72 -12.9 -3.12351 | gap 2, opp_overlap 544525, overlap 544572 TGGCGGCCGCCATCG CG-GGCGAACGC-CCGG TGC CCGAAGCGTTCGCCTCG TTCGGTCTCACGCAC TERM 448 544572 - 544601 + G 71 -14.3 -2.77182 | gap 1, opp_overlap 544525, overlap 544570 GCGGCCGCCATCGCG GGCGAACGC-CCGG TGC CCGAAGCGTTCGCC TCGTTCGGTCTCACG Bphy_3597 543438 - 544715 + | FAD dependent oxidoreductase TERM 449 545306 - 545335 + G 76 -9.3 -4.08394 | opp_overlap 545306 545304 545299 TCACACCATCGAAGA TCTGTTGACGCGA GGAG TCGCGTCAGGGGA TTTTCGCGAGGATAT Bphy_3598 544833 - 545516 + | TetR family transcriptional regulator TERM 450 545592 - 545605 + T 70 -4.5 -4.52781 | gap 1 TCTTTTTTGGGTTTT CGCTGG CAT CC-GCG TTTTGCTTCTGGTTC TERM 451 545621 - 545653 + T 72 -5.4 -4.41348 | overlap 545623 545625 TTTTGCTTCTGGTTC GCTGGTGTTGCCCC TGTGC GGGGCGGCACTCAC TTTCTTTGCGGCGGC Bphy_3599 548602 - 545768 - | diguanylate cyclase/phosphodiesterase with GAF sensor TERM 452 548233 - 548252 + g 71 -7.8 -4.07885 | opp_overlap 548225 548242 CGAGATACGCGATGT CGTACAGC ACGC GCTGCACG TTTTGCGCGCGCATC TERM 453 548719 - 548700 - H 87 -3.6 -5.40072 | gap 1, overlap 548702 548703 TGGCGCGCAAAAAAA TACTTCGGC AAG GCCGAAA-A CGTTTGCCTGAAGGG TERM 454 548718 - 548702 - H 81 -8.7 -4.34482 | overlap 548700 548703 GCGCGCAAAAAAATA CTTCGGC AAG GCCGAAA ACGTTTGCCTGAAGG TERM 455 549345 - 549371 + G 74 -10 -3.72893 | opp_overlap 549310, overlap 549346 549348 GCCGTTTCCGCAGAG CGACCCGGTGCG CGG CGCGCAGGGTCC TTTGCTGGAGAACTG Bphy_3600 548860 - 549402 + | cupin domain-containing protein Bphy_3601 550340 - 549462 - | binding-protein-dependent transport systems inner membrane component Bphy_3602 551176 - 550337 - | ABC transporter related TERM 456 550630 - 550679 + g 72 -12.8 -3.14211 | ACGGTTCGTCCATCA GCAGCACG-CGCGGCTGCATCGCG AGCG CGCGC-GCAATCGCGACGCGCTGC TTCATGCCACCCGAT TERM 457 551417 - 551401 - R 100 -9.4 -5.0925 | opp_overlap 551401 551400 551403 GCCGAAAAGCAAAAA CCCGCT GAAAG AGCGGG CTTTCTGGCGCTTCG Bphy_3603 552497 - 551445 - | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein TERM 458 552478 - 552448 - G 79 -3.9 -4.9448 | AGCGATGAAACAAAA CGGCGAGCGA-GCGA CGG CCGCACCGCG-GCCG GGCGAATTGAAAACA Bphy_3604 553457 - 552543 - | taurine dioxygenase TERM 459 553048 - 553058 + g 75 -6.8 -4.40003 | overlap 553044 553050 GCGTGAAGCAGCGAG CCGA GAC TCGG TTTCTCTTTGTACGA Bphy_3605 553786 - 554232 + | hypothetical protein Bphy_3606 554540 - 555691 + | porin TERM 460 555727 - 555754 + F 100 -17 -4.07568 | overlap 555729 CGGGAACTGCGTTCG AAGCCCGCCGCA CTCG TGCGGCGGGCTG TTTTGCGCGCGCAGC TERM 461 555729 - 555752 + F 100 -19.6 -3.63744 | overlap 555727 GGAACTGCGTTCGAA GCCCGCCGCA CTCG TGCGGCGGGC TGTTTTGCGCGCGCA Bphy_3607 555906 - 556205 + | hypothetical protein Bphy_3608 556582 - 556920 + | hypothetical protein Bphy_3609 557758 - 556940 - | hypothetical protein TERM 462 557280 - 557262 - G 72 -11 -3.53224 | overlap 557271 TACTTGCGCGCCAAA GCGACGAA CGC CTCGTCGC AGAAGCTCTTGTGGC TERM 463 557497 - 557515 + g 81 -13.8 -3.53091 | opp_overlap 557469 557488 AGAGCACTCGCCGGT GCGTCGCG AAG CGCGGCGC TTTCAGCGCGAACAT Bphy_3610 558666 - 557878 - | short-chain dehydrogenase/reductase SDR Bphy_3611 558958 - 560070 + | porin Bphy_3612 561396 - 560368 - | 2-dehydropantoate 2-reductase Bphy_3613 562352 - 561555 - | fumarylacetoacetate (FAA) hydrolase Bphy_3614 563681 - 562434 - | formyl-CoA transferase Bphy_3615 564891 - 564529 - | hypothetical protein TERM 464 564879 - 564861 - G 88 -10.2 -4.43307 | overlap 564862 CGGGCAACAAAATAA CCGGCACC TCA GGCGCCGA CGCGCGCCTCAAGTT Bphy_3616 565300 - 564869 - | putative PAS/PAC sensor protein TERM 465 565365 - 565347 - R 90 -11.7 -4.13767 | opp_overlap 565349 CCGCTCAGTTGAAAA CAGCGCC ACGCG GGCGCTG TTCAGCGGGACTGCG Bphy_3617 566673 - 565423 - | formyl-CoA transferase TERM 466 566215 - 566251 + g 75 -7.3 -4.2679 | gap 2, opp_overlap 566214 GCCGTCCCAGAAACC CGTCGTCGACGCTGCGC CGCCA GCGCACTG-CG-CGACG TTTTCATAGACCTTC Bphy_3618 568439 - 566700 - | oxalyl-CoA decarboxylase TERM 467 568158 - 568191 + g 72 -6.5 -4.22652 | gap 1, opp_overlap 568158 GAGGCCGTTCAGGAA GCCCGGCG-CGGACAC CGT GAGACAGATGCCGGGC TTTTGCGTCATGTAG TERM 468 568636 - 568647 + r 74 -2.2 -4.95155 | gap 1, overlap 568634 GGATAGTCCTGGGGT CG-CG CTG CGTCG TTTTTGTCGTGTGAC TERM 469 568693 - 568683 - R 77 -2.4 -5.0538 | CCTCAGTCCAAAAAA TCGC AAT GCGT TTCGACGTATAACGC Bphy_3619 569389 - 568670 - | GntR family transcriptional regulator TERM 470 569976 - 569991 + G 80 -8.2 -4.35524 | overlap 569972 TGACGATGCGGCTCG CGCCGG GCGC CCGGTG TTTTCGATTTCGCAG Bphy_3620 569671 - 570048 + | hypothetical protein TERM 471 570052 - 570084 + T 89 -3.9 -5.54079 | overlap 570058 570067 GCCGGAGCATAAGAT TCCTTGCCTGCGGCG CGG CGTTGCCGGTTTGGA TTTTTTGGTTTTTGG TERM 472 570258 - 570211 - T 73 -3.4 -4.86731 | gap 1, overlap 570225 570227 CGGTGGCAAAGAAAA GTAGGCAAAAG-AAAGCCGCTCA CAC CGAGCGTCGTCACGTTTACCCAC GGGCCCTCCACGTCC TERM 473 570243 - 570225 - T 78 -6.6 -4.6951 | overlap 570211 570227 AGTAGGCAAAAGAAA GCCGCTCA CAC CGAGCGTC GTCACGTTTACCCAC TERM 474 570743 - 570711 - T 76 -4.6 -4.86731 | overlap 570714 CCGCGGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACGCCAGC AAACCAGAAGCAAGA TERM 475 570789 - 570779 - T 71 -6.8 -4.20783 | ATGCCAGCGAAGAAA TGCC AAA GGCA AAACCGAAACCGCCA Bphy_3621 572132 - 570813 - | major facilitator transporter TERM 476 572537 - 572506 - R 73 -11.7 -3.13164 | gap 1, overlap 572508 TTGGCAATGAGGGAA GA-CGCGAACATCC GCAAA GGATGTCCGCGATC GATCAACGGCGAATC TERM 477 572534 - 572508 - R 83 -14.5 -3.12595 | overlap 572506 GGCAATGAGGGAAGA CGCGAACATCC GCAAA GGATGTCCGCG ATCGATCAACGGCGA Bphy_3622 573306 - 572587 - | GntR family transcriptional regulator Bphy_3623 574604 - 573873 - | hypothetical protein TERM 478 574741 - 574727 - H 90 -7.1 -5.11112 | AAAGTCGAATAAAAA TGCCG CAAAC CGGCA TACACAAATCAATTC TERM 479 575501 - 575523 + G 73 -6.1 -4.42974 | opp_overlap 575500, overlap 575503 GACACGCTCAACGAT CACGCGCGC CGTCA GCCCGCGAG TTTCTTCTGTCTGCG TERM 480 575970 - 575981 + G 70 -5.8 -4.25104 | TCGTCAATCCGCCCG CGCT GCAG AGCG TTTTGCTGAAGGAAG Bphy_3624 574772 - 576124 + | metallophosphoesterase Bphy_3625 576494 - 576141 - | hypothetical protein TERM 481 576595 - 576610 + H 78 -9 -4.13767 | opp_overlap 576570 GCCAATCGACAGGCT CGCGAA GATT TTCGCG TTTTCGAATGCACCG TERM 482 577625 - 577581 - g 72 -13 -3.05844 | CGTCGCAGGGCAACA TCGTGATCGT-GCCTAACGCCG TCG CGGCGA-AGGCGAAGATCACGA ACAGCAGCCGGCCGC TERM 483 578249 - 578264 + G 74 -2.4 -4.74103 | overlap 578242 578247 GTGACGATTTCGGCG CTGACG GCGT CGACGG TTTTTCAGTTGAACA TERM 484 578400 - 578411 + G 70 -2.2 -4.67755 | CGCCTGTGGCGCAGT CGGA GCAG TCTG TTTTTCAGTGGCTGT Bphy_3626 576995 - 578464 + | cyclic nucleotide-regulated small mechanosensitive ion channel TERM 485 578856 - 578820 - g 82 -7.1 -4.63932 | GACGCTCGAACAAAA CGTCGCGCTGCCGCT GCTGCTG AACGGCCTCGCGCCG CAGCGCGCCCACGAC Bphy_3627 578491 - 579207 + | ABC transporter related TERM 486 580009 - 580036 + G 71 -7.7 -4.08571 | opp_overlap 580003, overlap 580027 CAACATGAACGTGCT CGCGCTCGT CGCGCTGTTC ACGGGCGCG TTTCTCGTGTTCTCG TERM 487 580208 - 580225 + G 71 -4.1 -4.56597 | CTCGGATTTGCGCTC GCGCA TGCCGTAC TGCGC TTTTTCGGCAGCGAC TERM 488 581709 - 581735 + G 71 -10.1 -3.6682 | gap 1, opp_overlap 581711 CGTCGTCGTGCACGA CAGCCGTGGCGG CGGG CCGCCA-GGCCG TTTCCGTCGATGCCG Bphy_3628 579200 - 581776 + | hypothetical protein Bphy_3629 581776 - 582879 + | putative AttH Bphy_3630 583037 - 583348 + | hypothetical protein Bphy_3631 584699 - 583371 - | L-sorbosone dehydrogenase TERM 489 583440 - 583418 - G 83 -17.8 -2.62616 | CGACTCGCCACACGA CGTTGCCGAC ATC GTCGGCAACG AGCAGCGCGCCGCGC TERM 490 583531 - 583551 + g 71 -4.5 -4.56597 | opp_overlap 583513 583512, overlap 583529 GTCAGAAAATCTTCC GGGCCGCCC GCC GGTTCGCCC TTTTTGAACGGCACG TERM 491 585099 - 585137 + r 75 -3.8 -4.86385 | gap 2, opp_overlap 585122, overlap 585101 GCTTCTCACGACCAC GA-CGCTGCC-CGCCGGT GGACA ACCCGCGCGGCGACGATC TTTGTTTTTGCGCAT TERM 492 586012 - 585987 - R 76 -12.5 -3.14132 | GTTCGCGCTCATGAA TCCGTACCGCC CTTC GGCGGCACGGC GCCCGTCTCCCGCGC Bphy_3633 586318 - 585980 - | transposase IS3/IS911 family protein TERM 493 586809 - 586794 - R 73 -11.8 -3.11476 | overlap 586792 586791 ATGCACTCAAAAGGA CCCCGC GAAA GCGGGG CAGGTATCAGCGTTA Bphy_3636 587892 - 586822 - | hypothetical protein TERM 494 587851 - 587836 - G 73 -11.8 -3.37796 | opp_overlap 587830 587829 TTTGAGCAGGTAGAA CGCGCG GTCG CGCGCG TCGTCATCGTTTTTC Bphy_3637 589451 - 587904 - | hypothetical protein TERM 495 589745 - 589730 - R 73 -11.8 -3.08032 | overlap 589727 GGTGTCTCAAAAGGA CCCCGC GAAA GCGGGG CAGGTATCAGCGTTA Bphy_3638 590825 - 589758 - | hypothetical protein TERM 496 590784 - 590769 - G 73 -11.8 -3.37796 | opp_overlap 590763 590762 TTTGAGCAGGTAGAA CGCGCG GTCG CGCGCG TCGTCATCGTTTTTC Bphy_3639 592384 - 590837 - | hypothetical protein Bphy_3640 595206 - 592381 - | type VI secretion system Vgr family protein TERM 497 593890 - 593909 + g 75 -7 -4.37886 | opp_overlap 593888 593889 GGCGTACTCGAAACC CGCCTGGG ATGG CCAGGGCG TTTTGTGCGGCATGC Bphy_3641 595467 - 595216 - | GP29 TERM 498 595610 - 595598 - R 86 -6.3 -4.96848 | opp_overlap 595598 CGCCTTACATAAAAA TCACA CCC TGTGA TATATGGCGCGTCGT TERM 499 595749 - 595763 + r 70 -4.2 -4.58395 | overlap 595738 595743 CGCCCCAACGGCATC CATAGG ATT CCTCTG TTTTTGAGAGATAGC Bphy_3642 596127 - 595804 - | hypothetical protein TERM 500 595965 - 595978 + g 71 -4.5 -4.56597 | overlap 595946 TGCTCACGCGAATGC GTTGC GCAA GCAGC TTTTTCCACACGCGC TERM 501 596165 - 596152 - R 72 -9.5 -3.65902 | opp_overlap 596151 596163 GGCAGGCCACCGAAA CCGGC CATT GCCGG CTATGTCGTTCGATC Bphy_3643 596479 - 596252 - | transposase TERM 502 597020 - 597048 + r 81 -8.8 -4.38154 | GCGTTGTGCGCCCGT CGATGGCCGAGC CGCCC GCGTGGCCATTG TTTTGTGCAACATGT Bphy_3645 599358 - 598003 - | putative TRAP-type uncharacterized transport system, periplasmic component protein TERM 503 598105 - 598084 - G 71 -9.3 -3.68962 | CCGCAACACATAGAA GCCGTCGGC GTAC GCCAGCGGC ATTCGCAGCGTGTCC TERM 504 598443 - 598420 - G 74 -11 -3.59979 | opp_overlap 598438 CTCGCTGATCCGAAA TTCCCGGACC ACGG GGTTCGGGAA CTGCCCCGCTTTCTG TERM 505 599492 - 599472 - R 79 -7.5 -4.63218 | overlap 599484 CTGCCGCTAACAAAA TCGCGCCAA GCA CTTGCGCGA TCGAAAGGGTGTCTT TERM 506 599663 - 599612 - R 100 -19 -3.83844 | opp_overlap 599612 599625, overlap 599625 CCTACCAACGAACAA GCAGCAAAAAAAAGCGGCAAGCAT TTCT ATGCTTGCCGCTTTTTTGTTCTGG GTTTGCGCGCAGTCT TERM 507 599612 - 599663 + r 100 -19 -2.72263 | opp_overlap 599612 599625, overlap 599625 CCTACCAACGAACAA GCAGCAAAAAAAAGCGGCAAGCAT TTCT ATGCTTGCCGCTTTTTTGTTCTGG GTTTGCGCGCAGTCT TERM 508 599625 - 599650 + r 100 -17.7 -5.56673 | opp_overlap 599612 599625, overlap 599612 AAGCAGCAAAAAAAA GCGGCAAGCAT TTCT ATGCTTGCCGC TTTTTTGTTCTGGGT TERM 509 599650 - 599625 - R 100 -17.7 -5.89827 | opp_overlap 599625 599612, overlap 599612 AAGCAGCAAAAAAAA GCGGCAAGCAT TTCT ATGCTTGCCGC TTTTTTGTTCTGGGT TERM 510 599715 - 599740 + r 72 -9 -3.90112 | opp_overlap 599715 CCACCAACGAAAAAA GCCGAAAGAC TTTCTT GTCCTTCGGC TTTCGTTCAACAGAC TERM 511 599740 - 599715 - R 100 -11.2 -5.30155 | opp_overlap 599715 CCACCAACGAAAAAA GCCGAAAGAC TTTCTT GTCCTTCGGC TTTCGTTCAACAGAC Bphy_3646 600142 - 599801 - | cytochrome o ubiquinol oxidase subunit IV Bphy_3647 600756 - 600142 - | cytochrome o ubiquinol oxidase, subunit III TERM 512 600770 - 600819 + r 88 -11.3 -4.21462 | gap 1, overlap 600775 600786 ATCACTCGACCTCCG CGAGCGCCG-GCGCCACGTCCGCG CGT TGCGGAAGCGGCGTGCGGCCTTTG TTTTCGATCGTCCGT TERM 513 600775 - 600814 + r 87 -14.2 -3.40622 | gap 1, overlap 600770 600786 TCGACCTCCGCGAGC GCCG-GCGCCACGTCCGCG CGT TGCGGAAGCGGCGTGCGGC CTTTGTTTTCGATCG Bphy_3648 602768 - 600756 - | cytochrome o ubiquinol oxidase, subunit I TERM 514 600786 - 600815 + g 93 -11.3 -4.6951 | overlap 600775 600770 GAGCGCCGGCGCCAC GTCCGCGCGTTGC GGAA GCGGCGTGCGGCC TTTGTTTTCGATCGT Bphy_3649 603671 - 602772 - | ubiquinol oxidase, subunit II TERM 515 603434 - 603448 + g 88 -8.5 -4.63218 | AGTGTGCCCACTTCG GCGCG TAGAC CGCGC TTTTGTTCGACGCGC TERM 516 603536 - 603548 + g 74 -4.8 -4.56597 | opp_overlap 603498 TCGTCCACGTTGCCG TCGC GATCA GCGA TTTTTCGGCGACGCC TERM 517 603746 - 603729 - R 76 -4.9 -4.74103 | gap 1 TTTGCAAGGCAAAAA GCACA-AG GTC CTATGTGC CAGGCGATTCTATGG TERM 518 603820 - 603798 - R 75 -9.8 -3.8186 | overlap 603799 GACTTCAATCAAGAA CGCCGACGGA AAT TCCGTCGGAA GACGTGCGACGCGTT Bphy_3650 604192 - 603989 - | hypothetical protein Bphy_3651 604609 - 604202 - | hypothetical protein Bphy_3652 604908 - 605408 + | OmpA/MotB domain-containing protein Bphy_3653 605582 - 606109 + | rare lipoprotein A Bphy_3654 607678 - 606479 - | extracellular ligand-binding receptor TERM 519 606708 - 606694 - G 71 -7.8 -4.08706 | overlap 606695 CGGCGATCACATAAA CCGCGT CGT ACGCGA ACGGGGCGTTGAACA TERM 520 607776 - 607764 - H 86 -5.5 -5.1287 | TGTATATCCAAAAAA CGGTA GCA CACCG AGATGCTCATCGCTG Bphy_3655 607950 - 608240 + | putative signal peptide protein TERM 521 608289 - 608256 - T 95 -18.3 -2.53164 | opp_overlap 608256 608262, overlap 608262 GCACGCAGCACCAAC GAAAAACGGGCTAGC AAAA GCTAGCCCGTTTGTC TTTACAGCGCGGGTC TERM 522 608256 - 608289 + T 100 -18.3 -3.53224 | opp_overlap 608256 608262, overlap 608262 GCACGCAGCACCAAC GAAAAACGGGCTAGC AAAA GCTAGCCCGTTTGTC TTTACAGCGCGGGTC TERM 523 608262 - 608283 + T 100 -15.9 -4.32857 | opp_overlap 608256 608262, overlap 608256 AGCACCAACGAAAAA CGGGCTAGC AAAA GCTAGCCCG TTTGTCTTTACAGCG TERM 524 608283 - 608262 - T 100 -15.9 -4.90869 | opp_overlap 608262 608256, overlap 608256 AGCACCAACGAAAAA CGGGCTAGC AAAA GCTAGCCCG TTTGTCTTTACAGCG Bphy_3656 609907 - 608315 - | alkyl hydroperoxide reductase, F subunit TERM 525 610014 - 609982 - R 85 -14.9 -3.14881 | GAACGCGCGCAGTAA GACAGTTCGCAAGGC GCA ACCTTGCGGACTGCC TCACGCGGCGCCGCG TERM 526 610019 - 610043 + r 100 -20 -3.53012 | TGCGGACTGCCTCAC GCGGCGCCGC GCGTG GCGGCGCCGC TTTGGAGACAGCAGG Bphy_3657 610663 - 610100 - | peroxiredoxin TERM 527 611772 - 611788 + G 74 -10.1 -3.71527 | GCATCGAGGCGCTGC GCTCCGC TAC GTGGAGC TTTCCGTCGTTCAGC TERM 528 611913 - 611877 - g 72 -7.1 -4.20783 | overlap 611878 611881 611897 611903 AGCGGATGGAAGAAA TCCAGCGCCGTTTCGAC GAA GACAAACCGGCGCTTGC CCGCTACAACCTGAA TERM 529 612277 - 612300 + G 71 -4.5 -4.56597 | gap 1, overlap 612276 612277 612291 CGACGACGCGGATTC CGTGC-CCGG CTTTC TCGGCGCGCG TTTTTCCCGCGCGCA Bphy_3658 610907 - 613285 + | DNA-directed DNA polymerase Bphy_3659 614366 - 613341 - | 2-alkenal reductase TERM 530 614202 - 614151 - G 100 -21.4 -3.36273 | gap 1 GGGCGTGAAGAGGAA CCCCGAGCCGGTGCCCGCAGGTGCG TGG CGCTCCCGCGCGC-CCGGCACGCGG CGCTCGACGGTGATG Bphy_3660 614689 - 614498 - | hypothetical protein Bphy_3661 615107 - 614916 - | hypothetical protein TERM 531 615328 - 615315 - H 75 -3.7 -4.79949 | overlap 615317 615318 CGGTCAAAAAAAGAA CAGGC GCCC GCCGG GCACGAACAGATTTC Bphy_3662 615445 - 615729 + | hypothetical protein Bphy_3663 616118 - 615792 - | hypothetical protein TERM 532 615919 - 615933 + g 76 -9.2 -4.18018 | opp_overlap 615910 615918 TCAAAGGCGAAGCAG GCGCGG CCC TCGCGC TTTTCGATCGCCGAG Bphy_3664 617664 - 616102 - | sulphate transporter TERM 533 617690 - 617719 + r 89 -15.7 -3.38072 | gap 1 AAGGTCGAGTTGAGC CCTGCCGCCCGGCG ATG CGC-GGGCGGCACG TTGATCTTCAATGAA Bphy_3665 618411 - 617758 - | carbonate dehydratase TERM 534 618778 - 618803 + r 93 -13.3 -3.85209 | opp_overlap 618772 CGGAAGAAGGTGACG GGATGGATCGC ATGC GCGACCCATCC TTCTTGTGAATTACT Bphy_3666 619191 - 618814 - | hypothetical protein TERM 535 619791 - 619769 - g 77 -11.9 -3.64703 | TCGCGCCCACGCAAA CCGGCGCGC GAGCG GCGAGCCGG AGGTGCGCCGCAAGG TERM 536 619989 - 619950 - g 95 -17.2 -3.86346 | gap 1 GGACCTTCGGACAAA TGCGACAAG-GGCGCATGC GCT GCACGCGCCGCGCGTCGCA CGGCAACGGCCGAGC Bphy_3667 619707 - 620282 + | hypothetical protein Bphy_3668 620334 - 620717 + | YbaK/prolyl-tRNA synthetase associated region Bphy_3669 621334 - 620735 - | flavoprotein WrbA TERM 537 621269 - 621284 + g 77 -9 -4.2349 | GCGTGCACCTTCCGC GATGGC CTCC GCCATC TTTTCGATATGCCCG Bphy_3670 621614 - 622189 + | hypothetical protein TERM 538 622211 - 622252 + F 100 -18.9 -2.74263 | gap 1, opp_overlap 622218, overlap 622218 TTCAGAAGCCACATC GAAG-GAAGCGCATCGCGGC ATC GCCGGGATGCGCTTTTCTTC ATTTGGGCGTCGGCT TERM 539 622218 - 622244 + F 100 -18 -4.84642 | opp_overlap 622218, overlap 622211 GCCACATCGAAGGAA GCGCATCGCGGC ATC GCCGGGATGCGC TTTTCTTCATTTGGG TERM 540 622244 - 622218 - f 93 -18 -3.39142 | opp_overlap 622218 622211 GCCACATCGAAGGAA GCGCATCGCGGC ATC GCCGGGATGCGC TTTTCTTCATTTGGG Bphy_3671 622619 - 623083 + | hypothetical protein TERM 541 623118 - 623142 + G 89 -18.6 -3.14132 | CCGCACTGCCATTCT CGCGGCGAGC CTGGC GCTCGCCGCG TTCATGAGCCAGGCC TERM 542 623348 - 623338 - g 81 -3.2 -5.00616 | overlap 623347 CCCGCCGCGAAAAAA CGCA AGG TACG CGCCTCCGTCGACGT Bphy_3672 623080 - 623463 + | hypothetical protein Bphy_3673 623497 - 623991 + | lytic transglycosylase catalytic TERM 543 624005 - 624023 + T 83 -13.8 -3.51976 | opp_overlap 623997, overlap 624002 624020 GAAGACACTGCCCGG CGCGGGCG CCC TGCCCGCG TTCATTTGCGCGATT Bphy_3674 624429 - 624025 - | hypothetical protein TERM 544 624886 - 624912 + H 71 -7.2 -4.13767 | opp_overlap 624903, overlap 624888 624889 ATTTTTTATTCCGCT GGTTCGCCGCTT TAA AAGCGGCGGGTA TTTTCCCGTCCGCAA TERM 545 624888 - 624910 + H 81 -12 -3.6692 | opp_overlap 624903, overlap 624886 624889 TTTTTATTCCGCTGG TTCGCCGCTT TAA AAGCGGCGGG TATTTTCCCGTCCGC TERM 546 624889 - 624909 + H 76 -13.3 -2.79831 | opp_overlap 624903, overlap 624888 624886 TTTTATTCCGCTGGT TCGCCGCTT TAA AAGCGGCGG GTATTTTCCCGTCCG TERM 547 624925 - 624903 - H 75 -8.4 -4.07568 | gap 1, opp_overlap 624889 624888 624886 TTCGCCGCTTTAAAA GCGG-CGGG TATTTT CCCGTCCGC AAATTCCTATTATTG TERM 548 625440 - 625425 - g 70 -6.1 -4.32177 | GGATGCCAGAAGAAA GGCGT CCTGCC ACGCC GCCGAAACCGCCTGA Bphy_3675 625063 - 625455 + | hypothetical protein Bphy_3676 625546 - 626148 + | hypothetical protein Bphy_3677 626199 - 626462 + | hypothetical protein Bphy_3678 627725 - 626469 - | diguanylate cyclase with GAF sensor Bphy_3679 627926 - 627732 - | hypothetical protein Bphy_3680 628291 - 627956 - | hypothetical protein Bphy_3681 629045 - 628323 - | hypothetical protein TERM 549 628702 - 628647 - G 86 -13 -3.86015 | overlap 628631 628689 628690 GATGCCCGTCAGAAA GCCGACAGGCCCGCCGATCGCGGCGA GATG CCACCGCGAAAAGCGGACCGCGCGGC GCGCGAGCCAGCGGC TERM 550 628714 - 628689 - G 72 -8.9 -4.11394 | gap 1, overlap 628647 628690 ATGCCACCGCGAAAA GC-GGACCGCGC GGC GCGCGAGCCAGC GGCGCGCGGGCACCA Bphy_3682 629456 - 629166 - | hypothetical protein Bphy_3683 629458 - 630612 + | acyl-CoA dehydrogenase domain-containing protein TERM 551 630752 - 630729 - f 70 -2.4 -4.84359 | gap 1, opp_overlap 630738, overlap 630745 CGATTGCCAGAAAAA TCATCCC-GTC CTA AACTGGGTTGA TGACGCAACGCAACA TERM 552 631567 - 631613 + G 80 -14.5 -3.05384 | opp_overlap 631565 AGCCCTGGCAAACCT GCCGTAATCGCCAATTGCCAG GCAGG CTGGCAAGTGCTGATGACGGC TTCGATGCGCCCCGA TERM 553 633275 - 633248 - g 100 -11.2 -4.89477 | gap 1, overlap 633249 CGTCGAAGAAGAAAA CGGCGCGCCGCGC GGA GC-CGGCGCGTCA GCAGGTCGAATGACA TERM 554 633274 - 633249 - g 75 -12.5 -3.52963 | gap 1, overlap 633248 GTCGAAGAAGAAAAC GGCGCGCCGCGC GGA GC-CGGCGCGTC AGCAGGTCGAATGAC Bphy_3684 631003 - 633288 + | hypothetical protein TERM 555 633408 - 633394 - g 75 -4.2 -4.63542 | overlap 633384 633396 CACAAGCGCGAAAAA TACGAG CGT CTCGTC GCCTTTGCGGCCACG Bphy_3685 633373 - 634314 + | phosphate butyryltransferase TERM 556 635262 - 635302 + G 85 -11.9 -4.07568 | overlap 635266 CATCTCGCGCGAACT CGGCTCGC-TCGCGGCCGC ACTCG GCGGCCTCGATGCGA-TCG TTTTCACCGCGGGCA TERM 557 635266 - 635299 + G 80 -14.6 -3.08032 | gap 1, overlap 635262 TCGCGCGAACTCGGC TCGC-TCGCGGCCGC ACTCG GCGGCCTCGATGCGA TCGTTTTCACCGCGG Bphy_3686 634333 - 635514 + | acetate kinase Bphy_3687 635517 - 636296 + | short-chain dehydrogenase/reductase SDR Bphy_3688 636302 - 636724 + | hypothetical protein Bphy_3689 636705 - 637016 + | hypothetical protein TERM 558 637074 - 637058 - f 72 -6.5 -4.36914 | opp_overlap 637058 637059, overlap 637059 GGCGGTTGCATAAAA CTGGTGC ACC GCACCAC TTTCCCTGTTATACT TERM 559 637562 - 637513 - g 83 -14.6 -3.29144 | gap 3, overlap 637524 CCACCTTCCCGACAA TTTCACCGAAACG-GCCG-CGATGG AAA CCATCGTCAGCACG-TTCGGCGAAA TGGGCGTCTCCGTAT Bphy_3690 637292 - 639286 + | RNA polymerase, sigma 70 subunit, RpoD TERM 560 639380 - 639344 - T 100 -21 -2.77029 | opp_overlap 639349, overlap 639349 GAAACAGCTTCAAAG CAAAAGCGCGGCAGCC TCAAG GGCTGCCGCGCTTTTT TTTCATTCCTGCGAT TERM 561 639349 - 639375 + T 100 -21.6 -5.96521 | opp_overlap 639349 639344 AGCTTCAAAGCAAAA GCGCGGCAGCCT CAA GGGCTGCCGCGC TTTTTTTTCATTCCT TERM 562 639375 - 639349 - T 100 -20.9 -4.55128 | opp_overlap 639349, overlap 639344 AGCTTCAAAGCAAAA GCGCGGCAGCC TCAAG GGCTGCCGCGC TTTTTTTTCATTCCT Bphy_3691 639861 - 639421 - | hypothetical protein Bphy_3692 640859 - 640008 - | hypothetical protein TERM 563 640285 - 640297 + g 73 -6.3 -4.42386 | CCTGCCGTCGCCAGT TCGAT CGA ATCGA TTTTCTGGATAAAGC TERM 564 641021 - 640998 - R 100 -12.4 -5.75342 | opp_overlap 640998 GCGCGCGAAAAAAAA CGCCAGGCAC ATCT GCACCTGGCG TACTTGACAATCGAC TERM 565 641042 - 641058 + r 82 -10.8 -4.10566 | GACAATCGACTGCAT GGGCGC GCGAA GCGCCC TTGTTCTTATTGGCT Bphy_3693 642560 - 641370 - | hypothetical protein TERM 566 641744 - 641686 - G 74 -4.6 -4.46212 | overlap 641687 CCTTCGAGCAGAAAA CCGTCGTCGACGCC-TTCGACCCGC-AGCG ACA CGCTCGCGCGCCGCACGGCATCGA-G-CGT GAAGTCGCCGTCGAA Bphy_3694 644413 - 642617 - | dihydroxy-acid dehydratase TERM 567 643490 - 643471 - G 70 -13.6 -2.54896 | overlap 643467 CCGGCATGCAATTGA CGAGCAGG GGCA CCTGCTCG CCGACCCGCTGCCAG Bphy_3695 645696 - 644569 - | LacI family transcription regulator TERM 568 645616 - 645634 + g 90 -16 -3.61178 | GGCCGCGAGCGGGCT GCGCGCCT CGG AGGCGCGC TTTGCGGTGCGTGGA TERM 569 645773 - 645793 + r 72 -4.5 -4.65895 | opp_overlap 645742, overlap 645754 CGCGCGGCATCAATC CGCGACACG CAA CGCGCTGCG TTTTTCGATCAGCCC Bphy_3696 646657 - 645767 - | SMP-30/gluconolaconase/LRE domain-containing protein TERM 570 646511 - 646484 - G 72 -8.4 -4.18018 | opp_overlap 646483 CTCCGTCAGGGAAAA GCAGCCGATG TTCTCAGG CATCGGCAGC ATCGTGTCCTGCCCC TERM 571 646954 - 646935 - H 80 -10.6 -4.06904 | GCATCGAATCACAAA CGGGCGCG GCAA CGCGCGCG CTGGAACACAGCATC TERM 572 647017 - 646980 - H 83 -15.5 -2.78816 | opp_overlap 646980 646981 GCATCGGTCAGGACA GCGGCGTCCCCTTCGTG CATG CACGGACGGGACGCCGT TTGCGTTGGCGACCA TERM 573 646981 - 647016 + H 100 -21.2 -3.75153 | opp_overlap 646980, overlap 646980 CATCGGTCAGGACAG CGGCGTCCCCTTCGTG CATG CACGGACGGGACGCCG TTTGCGTTGGCGACC Bphy_3697 647055 - 647819 + | uroporphyrin-III C-methyltransferase TERM 574 647848 - 647830 - T 71 -10.2 -3.54424 | opp_overlap 647843, overlap 647793 CCTGACTCGCTCAAA TGCCGCCG GGA CGGCCGCA CATCAGCTTCAGGAT Bphy_3698 648433 - 647825 - | CBS domain-containing protein TERM 575 648489 - 648537 + H 76 -12.5 -3.11732 | gap 3 TTATTGCGGCGATGC GCGCCCG-CG-GTTCC-CGCTGCG CTGC CGTAGCGCGGAGCACGTCGGCCGC TTACATCGCTTTCCG Bphy_3699 648623 - 649723 + | tRNA 2-selenouridine synthase Bphy_3700 652106 - 649764 - | diguanylate cyclase/phosphodiesterase TERM 576 650867 - 650835 - G 71 -7.5 -4.07568 | overlap 650837 650840 CGGCTTCGGCGAAAA CAGCACGGCGGGCGG CAC CTGCGCGCCGTCCTC GCGCTCGCCGCGCAA TERM 577 650865 - 650837 - G 71 -10.1 -3.63744 | overlap 650835 650840 GCTTCGGCGAAAACA GCACGGCGGGCGG CAC CTGCGCGCCGTCC TCGCGCTCGCCGCGC TERM 578 651452 - 651410 - G 78 -4.1 -4.84359 | overlap 651411 651412 651449 CGATGTCGAGAAAAA TCGCGCTCGTCTTCGCT CCGGGGTCC AGCGACGACAAACGCAG CGCCGCCTGCTCCAG TERM 579 651679 - 651666 - G 91 -9.5 -4.72986 | CAGGCTCAGCAAAAA CGGCG TGCC CGCCG CGTAAAACAGTGCAG Bphy_3701 652965 - 652462 - | GCN5-related N-acetyltransferase Bphy_3702 653353 - 653973 + | hypothetical protein Bphy_3703 654061 - 654414 + | AIG2 family protein Bphy_3704 654520 - 655074 + | hypothetical protein Bphy_3705 655561 - 655103 - | hypothetical protein TERM 580 655758 - 655719 - R 100 -7.8 -5.39721 | gap 1, opp_overlap 655721 655722, overlap 655724 GCACGAGACAAAAAA GGAAAGGCGGCGAAAGACG AAC CGTCCTTCACCGCCCG-CT TTCGGCGCCACACGT TERM 581 655754 - 655724 - R 100 -19.8 -4.49041 | opp_overlap 655722 655721, overlap 655719 AGACAAAAAAGGAAA GGCGGCGAAAGACG AAC CGTCCTTCACCGCC CGCTTTCGGCGCCAC Bphy_3706 657200 - 655779 - | aldehyde dehydrogenase TERM 582 658257 - 658237 - g 72 -9 -4.13945 | gap 1, overlap 658223 658238 AGCGGCAGCCGAAAA CGGCACGCG CGGA CG-GTGCCG CGCGTCGCAAGAAGA Bphy_3707 657303 - 658277 + | LysR family transcriptional regulator TERM 583 658289 - 658279 - f 70 -2.4 -4.78597 | GCAAGAAGAAATAAA CTCG TGT CGCG CTGTCGAATCCGGCC Bphy_3708 658384 - 658821 + | DGPFAETKE family protein Bphy_3709 659994 - 658828 - | hypothetical protein TERM 584 659140 - 659083 - G 70 -7.9 -3.96148 | gap 5, opp_overlap 659088 659089 CGCCTCGACCAGAAA CGCGG---CCAGTACGTT-CGCGCGCT-GG AAG CCGAGCGCGCGCAACGTGCCGATTTCCGCG ACGCGATTGGCGACC TERM 585 659088 - 659132 + g 75 -12.2 -3.53091 | gap 2, opp_overlap 659083, overlap 659089 CGACCAGAAACGCGG CCAGTACGTT-CGCGCGCT-GG AAG CCGAGCGCGCGCAACGTGCCGA TTTCCGCGACGCGAT TERM 586 659089 - 659131 + g 78 -15.7 -2.71712 | gap 2, opp_overlap 659083, overlap 659088 GACCAGAAACGCGGC CAGTACGTT-CGCGCGCT-GG AAG CCGAGCGCGCGCAACGTGCCG ATTTCCGCGACGCGA Bphy_3710 661173 - 660019 - | hypothetical protein TERM 587 660295 - 660277 - G 75 -10.2 -3.88291 | opp_overlap 660283 CAGCAGCGCGAGAAA GCCCGGCC CGA AGCCGAGC GCCTTGAGCGTCGCG Bphy_3711 661902 - 661195 - | ABC transporter related TERM 588 661802 - 661778 - G 73 -9.9 -3.92178 | opp_overlap 661781 ATCAGCGCAATGAAA TCGCCCTCGCG GAT CGCGAGCGTGA TGTCGGACAGCACAG Bphy_3712 663251 - 661899 - | RND family efflux transporter MFP subunit TERM 589 662839 - 662871 + g 81 -13.3 -3.64703 | overlap 662840 ACGCCGAGCCATTCC AGCCGCCCTTGCGCC TTT GACGCAACGGCGGCC TTTCGCTGGGGCACG TERM 590 662840 - 662870 + g 84 -16.8 -2.78679 | overlap 662839 CGCCGAGCCATTCCA GCCGCCCTTGCGCC TTT GACGCAACGGCGGC CTTTCGCTGGGGCAC Bphy_3713 663329 - 664186 + | methyltransferase TERM 591 664864 - 664883 + G 72 -7 -4.21908 | overlap 664865 664867 TCGCATCGAACCTGA TGTCGGCG TTCG CGCCGTCG TTTTCCGTGATGCTG TERM 592 665236 - 665257 + G 70 -7.3 -3.99324 | gap 1, overlap 665236 665249 AGAGCCTGCTGATGG T-CGCGCTGA TCT TCGGCGCGCA TTTCTCGTCGTACAC Bphy_3714 664545 - 665801 + | major facilitator transporter TERM 593 665853 - 665836 - f 78 -14.1 -2.52464 | opp_overlap 665852 TTCCGCCTGAACGCA GCGCGCC GCTC GGCGCGC TCGTGAGCGAACTGT TERM 594 666257 - 666272 + G 72 -3.2 -4.64144 | GCACGTATGTCCGAT GCCG CATTCCGC CGGC TTTTTCCCCATTCTT Bphy_3715 666098 - 666379 + | hypothetical protein TERM 595 666450 - 666402 - f 78 -11.6 -3.72576 | gap 1 TCGTCTTGCATGAAA CGGCGCAGGCGCGCTTACGCCGC TTAC GCCGCTTACGC-CGCTTACGCCG CTTACGCCGCTTACG Bphy_3716 666523 - 668097 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 596 668156 - 668103 - f 100 -22.3 -2.62616 | opp_overlap 668149 GCAGGTTTGACACGA TCGCGCGAACGCAGCCGGGCGGCAG TGGA CGGCCGCCCGACCGCCTTCGCGTGT GCCTGCGGCGCGCGG Bphy_3717 668219 - 669178 + | NUDIX hydrolase TERM 597 669424 - 669466 + F 72 -8.8 -3.79906 | opp_overlap 669409 669410 669449, overlap 669410 CCCGCCCGATCGACG GGCGCTATGTGCGGCAGCGC ACA GAGCCGCCGCGTCCCGCGCC TTATTCTCCCGATGA Bphy_3718 669576 - 670040 + | hypothetical protein TERM 598 670598 - 670569 - g 84 -12.8 -3.71873 | gap 1 CCAGGCAGATCGAAA CG-GCGGCACGCG GCAAG CGCGAGCCGCTCG TGCATACGGCGGACG Bphy_3719 670037 - 670660 + | OmpA/MotB domain-containing protein TERM 599 672201 - 672173 - g 85 -12.3 -4.08692 | overlap 672161 CAACGCGCCGGAAAA GACGGCGGCCGCG CAA CCCGTCCGCCATC CCGAGTCATGAATCG Bphy_3720 670713 - 672212 + | putative Chase2 sensor protein Bphy_3721 672543 - 672262 - | hypothetical protein TERM 600 672337 - 672356 + g 74 -10 -3.72576 | gap 1 AGTCATTGTTTCGTC GCCGC-CGA CGC TCGCGCGGC TTTCATCGGCCGCAC TERM 601 672606 - 672565 - R 81 -3 -5.18866 | gap 2, opp_overlap 672572, overlap 672568 672569 672570 TCCAAATAAACAAAA GAACGCCTTGACGCGTCGCG CTCT CGCTGCGCGTCAATG--TTC GACATGGGTGGAACG TERM 602 672605 - 672568 - R 70 -3.9 -4.64595 | opp_overlap 672572, overlap 672565 672569 672570 AAATAAACAAAAGAA CGCCTTGACGCGTCGCG CTCT CGCTGCGCGTCAATGTT CGACATGGGTGGAAC TERM 603 672572 - 672601 + r 83 -14.3 -3.04461 | opp_overlap 672570 672569 672568 672565 AAACAAAAGAACGCC TTGACGCGTCGCG CTCT CGCTGCGCGTCAA TGTTCGACATGGGTG TERM 604 672882 - 672844 - R 89 -16.9 -3.07242 | gap 1, overlap 672837 GACAACAAGGAGATA CGCGCGCCAGACAATG GGTCCGAG CATTGTC-GGCGCGCG ACTCGATGTCGGGCG TERM 605 672987 - 672945 - R 100 -24.8 -5.4505 | TCGCCCAACAAAAAA CCGGCCGCGAGACCCGCGCA TTG CGCGCGGACACCGCGGCCGG CTTCAGGTGCCTGCC Bphy_3722 674172 - 673009 - | hypothetical protein TERM 606 674268 - 674282 + r 74 -7.1 -4.26634 | opp_overlap 674267 TTCGCGGAACGAACC CGCGT TGAGC ACGCG TTTTAGCCTTGTTTT Bphy_3723 674649 - 674311 - | hypothetical protein Bphy_3724 676158 - 674782 - | undecaprenyl-phosphate glucose phosphotransferase Bphy_3725 677714 - 676200 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 607 678536 - 678546 + G 84 -8.2 -4.56597 | overlap 678522 678521 TGCCGATCGCATTTT GCGC ATG GCGC TTTTTCGGAAGAAGC Bphy_3726 678448 - 679764 + | O-antigen polymerase TERM 608 680164 - 680214 + G 72 -11 -3.51934 | overlap 680162 ATGGTCATTCGCACT CGGTCGCCGAAGTGGTGGCGGG TTGGACT CTCGGCACGATCGCGGCGACCG TCTTTCTGCGCACGG TERM 609 680378 - 680401 + G 71 -8 -4.07568 | CCATACACCGGGGAT CGTGCGCGCG CTTT CGCATGCGCG TTTTCGCAACCACGG Bphy_3727 679791 - 680420 + | phosphoesterase, PA-phosphatase related TERM 610 680467 - 680486 + T 78 -2.8 -5.06816 | gap 1, overlap 680468 AGATGCCGCTCGCGT TCGTCG-TC CTT GATCGACGC TTTTTCTTCGACGGT Bphy_3728 681635 - 680442 - | glycosyl transferase group 1 Bphy_3729 683010 - 681694 - | polysaccharide biosynthesis protein TERM 611 682786 - 682770 - G 71 -3.7 -4.5442 | opp_overlap 682770 TGTGCAACGAGAAAA TAGCG TTGTATT CGCTA TTGTTCTGCGCCTTG Bphy_3730 684054 - 683044 - | glycosyl transferase family protein TERM 612 683847 - 683866 + g 83 -9.2 -4.4078 | overlap 683848 CAACGCCCAGGTTGT AGGCGGAC ACCT GTCCGCCG TTTTCCTTGAGGACA TERM 613 683848 - 683865 + g 74 -12.7 -3.24146 | overlap 683847 AACGCCCAGGTTGTA GGCGGAC ACCT GTCCGCC GTTTTCCTTGAGGAC Bphy_3731 685639 - 684152 - | hypothetical protein Bphy_3732 686738 - 685623 - | glycosyl transferase group 1 TERM 614 686587 - 686566 - G 76 -9.4 -4.19817 | opp_overlap 686571 686578 686586 CGCAGCCACGGAAAA CGCCGCTG CCGCTT CAGCGACG CGCCGGGTTCTCTCG Bphy_3733 689142 - 686800 - | exopolysaccharide tyrosine-protein kinase TERM 615 688584 - 688567 - G 70 -7.7 -3.96148 | gap 1 GCCCTTGACCAGAAA CTCG-CCC GAC GGGCCGAG CAGTTCATAGGCGCC Bphy_3734 690084 - 691121 + | AraC family transcriptional regulator Bphy_3735 691143 - 692159 + | hypothetical protein TERM 616 692163 - 692197 + T 100 -30.8 -3.59979 | opp_overlap 692153 GCAGAGGTGTGATGT GCGCAGGCCCGCTCGC GAT GCGGGCGGGCCTGCGC TTTGGAATGCAGCCG Bphy_3736 693781 - 692231 - | hypothetical protein Bphy_3737 695662 - 694616 - | AraC family transcriptional regulator Bphy_3738 697171 - 695762 - | response regulator receiver protein Bphy_3739 699232 - 697445 - | hypothetical protein TERM 617 698399 - 698363 - G 88 -14.3 -3.81951 | opp_overlap 698397 GTTGATACCATGAAA CGAGCCGCGCGTCGCTG CCA CGGCGATACGCGGATCG CTGCACGGCAGCCAT Bphy_3740 699765 - 700820 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bphy_3741 700896 - 702161 + | hypothetical protein Bphy_3742 702300 - 702578 + | hypothetical protein TERM 618 702600 - 702622 + F 85 -15.6 -3.05596 | opp_overlap 702599 702598 GCGCGTGGCCAAAGC GGTGACGCGT AGC GCGCGTCACC TTCGATCGACACATG TERM 619 703198 - 703216 + G 86 -14.6 -3.4811 | overlap 703196 GGCTGGGTGGCGGAC CGCTTCGG CTC CCGAAGCG TATTCTTCTCCGCGA Bphy_3744 702982 - 704412 + | EmrB/QacA family drug resistance transporter Bphy_3745 704510 - 704758 + | hypothetical protein Bphy_3746 705732 - 705058 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 620 705325 - 705302 - G 70 -11 -3.38316 | overlap 705308 GGATCATTGAACGAA GCGAAAGAGC CATA GCTCTTACGC TCGGGATGTGGGCCG Bphy_3747 706130 - 705861 - | hypothetical protein Bphy_3748 706497 - 706135 - | hypothetical protein Bphy_3750 707127 - 706771 - | hypothetical protein TERM 621 706977 - 706965 - G 75 -9.1 -3.97947 | overlap 706967 706968 GCCACGGACCATAAA GACGC TGC GCGTC CGCGAGGCCGGGGTA TERM 622 707635 - 707672 + H 84 -15.5 -2.87344 | opp_overlap 707636 ACATCGACCGCACAA ACGCCAAGACCCCGCTT TTGA GGGCGGGGTCATGGCGA TGTATAAGGAGCCTG TERM 623 707671 - 707636 - H 100 -17.6 -3.89822 | opp_overlap 707635 CATCGACCGCACAAA CGCCAAGACCCCGC TTTTGAGG GCGGGGTCATGGCG ATGTATAAGGAGCCT TERM 624 710322 - 710333 + H 71 -7.2 -4.2354 | AGGATCTGTTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 625 713181 - 713167 - g 70 -2.7 -4.59511 | opp_overlap 713167 713167, overlap 713157 AACATTCGCTAAAAA GCTGC TGTTT GCTGC TGCTTTCTTGCGTCT Bphy_3753 713058 - 713420 + | hypothetical protein Bphy_3754 714039 - 713566 - | hypothetical protein Bphy_3755 714424 - 716250 + | phosphoesterase TERM 626 716308 - 716346 + F 90 -11.7 -4.11773 | gap 1, overlap 716311 716312 GCCGGACAATTCGTC GTAGTTCGAGCCAGCACG GCGA CGTGCTGGCTCGG-CGTC TTTTCAGCACTATTT TERM 627 716311 - 716344 + F 84 -13.1 -3.64984 | overlap 716308 716312 GGACAATTCGTCGTA GTTCGAGCCAGCACG GCGA CGTGCTGGCTCGGCG TCTTTTCAGCACTAT TERM 628 716312 - 716343 + F 87 -16.6 -2.78508 | overlap 716311 716308 GACAATTCGTCGTAG TTCGAGCCAGCACG GCGA CGTGCTGGCTCGGC GTCTTTTCAGCACTA Bphy_3756 716377 - 717819 + | di-haem cytochrome c peroxidase Bphy_3757 718908 - 717928 - | lipoic acid synthetase TERM 629 718365 - 718342 - G 70 -11 -3.33492 | CCACGCAGCCGATAA CGCATCGAGC GCAC GATCGATGCG TCCGCGAAAGTCCGG Bphy_3758 720023 - 718911 - | alpha/beta hydrolase fold protein TERM 630 719460 - 719425 - G 80 -15.6 -2.79133 | gap 1 GAATGCCCGACGAGA TGCGCCTGCTCGATGCC GTG AGCATCGAGCAA-CGCA ATCACGCTATCGGCC Bphy_3759 721065 - 720061 - | transketolase central region Bphy_3760 722087 - 721104 - | pyruvate dehydrogenase (acetyl-transferring) Bphy_3761 723258 - 722164 - | ATP-NAD/AcoX kinase TERM 631 722279 - 722312 + g 75 -10.3 -3.85567 | gap 1, overlap 722270 AACGGGCCGCTCCAG TCGAGCGCGAT-TTCG TAG CGGTCGTCGCGCTCGA TTTCGATTTCGCGTT TERM 632 723842 - 723813 - g 70 -14.3 -2.50016 | gap 1, opp_overlap 723812, overlap 723812 723810 TCGTATGAGCAATAC CGGCTCGATC-CCG GTT CGGTGATCGGGCCG CGCGTGCTGACGTCG TERM 633 725318 - 725335 + G 70 -7.7 -3.96148 | gap 1 GCTGGATGGACGGCT CGCG-GAG CGT CTCGCGCG TTTCTCGTGGCCGGG Bphy_3762 723690 - 725639 + | Fis family GAF modulated sigma54 specific transcriptional regulator Bphy_3763 726620 - 725649 - | helix-turn-helix type 11 domain-containing protein Bphy_3764 726712 - 727092 + | antibiotic biosynthesis monooxygenase Bphy_3765 727089 - 728378 + | amino acid permease-associated region TERM 634 728559 - 728583 + F 100 -9.2 -5.11836 | gap 1, opp_overlap 728553, overlap 728560 728564 728565 GCAAAACGATCCCAA GGCCCC-GCCG GAAA CGGAAGGGGCC TTTTGTTTTGGGTGT Bphy_3766 728635 - 729021 + | hypothetical protein TERM 635 729069 - 729089 + T 78 -9.7 -4.04474 | opp_overlap 729069 GCGTGCAATAAAAAA GGCTCATAC ATC GTACGAGCC TTTCTATGCCGCTAT TERM 636 729089 - 729069 - T 100 -11.9 -5.4505 | opp_overlap 729069 GCGTGCAATAAAAAA GGCTCATAC ATC GTACGAGCC TTTCTATGCCGCTAT TERM 637 729106 - 729143 + T 86 -16.3 -2.83271 | opp_overlap 729118, overlap 729103 TTCTATGCCGCTATG TCGCGTGACAAACCGCT CAAC GGCGGTGCGTCACGCGA TGCTTCTGCACGTGG Bphy_3767 730362 - 729160 - | beta-ketoadipyl CoA thiolase TERM 638 731568 - 731530 - g 91 -11.7 -4.58283 | gap 2, overlap 731552 GAACCGTTGCAAAAA GCCGCGCAGTCGGTGTCCA ACA TGGTCG-CG-CTGCGCGGC TAGCAAGAAGCATCA Bphy_3768 730747 - 731571 + | IclR family transcriptional regulator Bphy_3769 732771 - 731581 - | amidohydrolase Bphy_3770 733474 - 732872 - | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN Bphy_3771 734214 - 733471 - | phosphonate metabolism protein TERM 639 734060 - 734093 + g 91 -16.7 -3.57144 | gap 1 AGCGCTTGCGACAGT GCGGGCGCGTCATGCG GAT CGCGTGTCGCGC-CGC TTTCGGCATCGCGCC Bphy_3772 734969 - 734211 - | GntR family transcriptional regulator Bphy_3773 735166 - 735669 + | phosphonate C-P lyase system protein PhnG TERM 640 735855 - 735805 - g 80 -14.6 -3.06315 | GCAAGATCGGCAAGA TCGGCAACGTGCTGCCCGCTTCGC AAG GCGACGCGCGCAGCAGCTTGCCAC GCGCGCGCGCGGATC Bphy_3774 735669 - 736316 + | phosphonate C-P lyase system protein PhnH TERM 641 736405 - 736378 - g 71 -11.9 -3.28712 | overlap 736379 GCGCCTGCTCGACAA GGCGCGCCGCG GCGACA CGCAGCTCGCC GAGCTGAGCGTCGCG Bphy_3775 736316 - 737431 + | phosphonate metabolism protein Bphy_3776 737428 - 738336 + | phosphonate metabolism PhnJ Bphy_3777 738333 - 739103 + | phosphonate C-P lyase system protein PhnK TERM 642 739573 - 739537 - g 71 -13.8 -2.70932 | opp_overlap 739542, overlap 739546 CGCGGCGTCGAAGGA GCGCAAGCA-CGCGCACG CGC CGC-CGCGCTGCTCGCGC GGCTGAATGTGCCCG Bphy_3778 739117 - 739872 + | phosphonate C-P lyase system protein PhnL TERM 643 739933 - 739911 - g 77 -11.3 -3.72324 | gap 1, opp_overlap 739909 739917 CATGCTGATCAAGAA CG-CCCGCGT CGTC ACGCGGGACG AGGTTTTCAACGGCG Bphy_3779 739897 - 741030 + | phosphonate metabolism protein PhnM TERM 644 741326 - 741307 - f 76 -12.1 -3.37493 | overlap 741318 CGGCCAATAGACCAA GCCCGGC ATAACG GCCGGGC GACGTCGCGCAGCGG Bphy_3780 741388 - 742170 + | cationic amino acid ABC transporter, periplasmic binding protein TERM 645 742221 - 742202 - f 87 -15 -3.25823 | opp_overlap 742202 CGCGCGGTACATGAA CGGGCTCC CTGC GGAGCCCG TTTTGTTTTTCCGGC TERM 646 742202 - 742221 + F 100 -15 -5.26119 | opp_overlap 742202 CGCGCGGTACATGAA CGGGCTCC CTGC GGAGCCCG TTTTGTTTTTCCGGC TERM 647 742948 - 742894 - g 70 -2.2 -4.59773 | gap 2, opp_overlap 742911 742926 742944, overlap 742895 742912 CTCGATGCGCAAAAA CCGCGCACTGAAATCGAATCGCAGCG TCTCG CGCTGCAACT-GCTTTC-GTACGACG CGGACATCGTCCTCG TERM 648 743316 - 743371 + G 100 -21.1 -2.87132 | gap 1, overlap 743318 CCCGCTCGAATTCGC CG-CGACGCCGCTCGCGGGCACCGAG CCGAT CGTGACGCCCGTGAGCGGCGTCGTCG TGTATCGCCACGAAG TERM 649 743318 - 743368 + G 100 -22.5 -2.69151 | overlap 743316 CGCTCGAATTCGCCG CGACGCCGCTCGCGGGCACCGAG CCGAT CGTGACGCCCGTGAGCGGCGTCG TCGTGTATCGCCACG Bphy_3781 742468 - 743583 + | succinylglutamate desuccinylase/aspartoacylase TERM 650 743646 - 743626 - f 95 -14 -4.0075 | opp_overlap 743626 ACCGAATGAAGGAAA TCGCCCGC CGCGT GCGGGCGA TTTTTTTTTCGCTGC TERM 651 743626 - 743646 + F 100 -14 -6.11644 | opp_overlap 743626 ACCGAATGAAGGAAA TCGCCCGC CGCGT GCGGGCGA TTTTTTTTTCGCTGC TERM 652 744580 - 744596 + G 80 -13.7 -3.35996 | ACATTCGTTTCCCGT CGGCTGG CAG CCAGCCG TTCTCCGTGGCGATC Bphy_3782 743904 - 745070 + | porin TERM 653 745144 - 745131 - T 70 -3.7 -4.71382 | opp_overlap 745139 745142, overlap 745132 745133 AGAAGGACTGAAAAA CGCCC TCAC GCGCG GGGCTCGCGCCGCTT Bphy_3783 746136 - 745165 - | pyridoxal-5'-phosphate-dependent protein beta subunit TERM 654 746228 - 746209 - R 82 -10.6 -4.11484 | opp_overlap 746206 746227 TGCAAGGCGTGAAAA GCGGCGCG TAGC CGTGCCGC CAGATTCCTCGCATT Bphy_3784 746571 - 746266 - | hypothetical protein Bphy_3785 747193 - 746561 - | YheO domain-containing protein TERM 655 747170 - 747183 + g 100 -2.3 -5.55664 | overlap 747171 CAGCGACGCCTGCTC CCGCT CCAA AGCGA TTTTTTTCATGGTAG Bphy_3786 747396 - 748142 + | carbonic anhydrase TERM 656 748581 - 748621 + G 75 -12 -3.54459 | gap 3, opp_overlap 748605 748608, overlap 748612 GTTCGCGATGCACTC GGCGCGGCTGCCGCGC-CA AAAAAC TGAGCGCGGCA-C-GCGCC TTTACACCAAATTAA Bphy_3787 748218 - 748607 + | hypothetical protein Bphy_3788 748736 - 749077 + | hypothetical protein Bphy_3789 749247 - 750302 + | hypothetical protein TERM 657 750370 - 750338 - T 100 -24.9 -4.12532 | opp_overlap 750338 GGCCCCAGACAGAAA GCCGCCGCCCGATGC AAC GCATCGCGCGGCGGC TTTTTCGCTTTCAAC TERM 658 750338 - 750370 + T 100 -24.9 -4.81249 | opp_overlap 750338 GGCCCCAGACAGAAA GCCGCCGCCCGATGC AAC GCATCGCGCGGCGGC TTTTTCGCTTTCAAC Bphy_3790 752854 - 750401 - | glycogen/starch/alpha-glucan phosphorylase Bphy_3791 753221 - 753448 + | hypothetical protein TERM 659 754958 - 754938 - g 77 -12.5 -3.63627 | opp_overlap 754949 GGCTGATAGGGCAAA CGACGGGCG CGG CGCTCGTCG CGCTGAGCTTCGGCA TERM 660 755109 - 755087 - g 77 -14.8 -2.87344 | CATCGTGCGCAGACA GCGGTGACCG CGA CGGTCGCCGC CAAAGAGCAATAGAC Bphy_3792 753656 - 755122 + | major facilitator transporter Bphy_3793 756152 - 755148 - | threonine aldolase Bphy_3794 759037 - 756290 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) Bphy_3795 759837 - 759034 - | hypothetical protein Bphy_3796 761881 - 760073 - | abortive infection protein TERM 661 760132 - 760143 + g 70 -2.2 -4.63218 | GCAGCATCGGCATCG CGAG CCCT TTCG TTTTCTTCGCGAGCC TERM 662 760418 - 760400 - G 78 -13.2 -3.55761 | overlap 760405 GATGGATTGCGCAAA GGACACGA CGC TCGTGTCC GCGACGTGCGGCGCA TERM 663 761034 - 761049 + g 72 -8.2 -4.09805 | opp_overlap 761033, overlap 761035 ACGTCGAGACGCAAT TGCCGC AGCG GCGGCG TTTCGTTCTTGATGG Bphy_3797 762345 - 761884 - | hypothetical protein TERM 664 762545 - 762505 - R 77 -10.4 -3.92075 | opp_overlap 762544, overlap 762510 762511 ATTCGCAGGCACAAA TACAACGCGCCCACGATC TCGAC GATCGTGGGCGCACAAGA CGCGTTGCTTGTTTC TERM 665 762540 - 762510 - R 100 -19.1 -3.90766 | overlap 762505 762511 CAGGCACAAATACAA CGCGCCCACGATC TCGAC GATCGTGGGCGCA CAAGACGCGTTGCTT TERM 666 762539 - 762511 - R 100 -20.4 -2.93737 | overlap 762510 762505 AGGCACAAATACAAC GCGCCCACGATC TCGAC GATCGTGGGCGC ACAAGACGCGTTGCT Bphy_3798 763936 - 762578 - | major facilitator transporter Bphy_3799 764421 - 764152 - | hypothetical protein TERM 667 764587 - 764610 + H 100 -11 -5.75342 | TCGCACATGTCCTCA GCCCACCG TTGCTAGC CGGTGGGC TTTTTTTTGGCAGGC Bphy_3800 764885 - 766225 + | major facilitator transporter Bphy_3801 766574 - 767593 + | ATPase Bphy_3802 767590 - 768480 + | putative MxaS-like protein Bphy_3803 768477 - 769382 + | hypothetical protein TERM 668 769906 - 769937 + G 71 -13 -3.01924 | CACGCCCGACACGCT GCTCGACCGCGG CATCCAGT CCGCCGTCGAGC TGTTCGACGGCCGTC Bphy_3804 769379 - 770377 + | von Willebrand factor type A TERM 669 770848 - 770817 - g 73 -12.2 -3.33492 | GGACGCACGCTACAA CCTCGAACGCGCGC TACG GCTCGCGCCCGAAG CGCAAGACACCGCCG Bphy_3805 770374 - 770934 + | putative MxaK-like protein Bphy_3806 770943 - 771905 + | putative MxaL-like protein Bphy_3807 771983 - 772306 + | hypothetical protein TERM 670 773743 - 773726 - g 79 -4.1 -4.85599 | gap 1, overlap 773727 773730 CCGAGTTGAGAAAAA CCGA-CGC GAG GCGCTCGA TCGCGCTCGACATGC TERM 671 773825 - 773809 - g 77 -5 -4.59109 | overlap 773810 773811 TACAGCTTGCAAAAA GGGCCG GCCAG CGGCCA ACTGCGCGGGAATCC Bphy_3808 772432 - 774168 + | TPR repeat-containing protein TERM 672 774184 - 774171 - f 75 -5.9 -4.63218 | CTGCCGCCAATAAAA CGGAC GCTT GCCCG CCTCTCGAGACAAAC TERM 673 774302 - 774316 + F 70 -2.1 -4.76041 | gap 1, opp_overlap 774273, overlap 774295 774294 CACGCATTGCCGGTT TC-GGC GCCG GCCTGA TTTTTCGTCGATCTA TERM 674 775343 - 775333 - g 100 -8.2 -5.36441 | overlap 775334 CCTGCAGACAAAAAA GCGC ATT GCGC GCTGGGACCTCTCGC Bphy_3809 774371 - 775528 + | amine dehydrogenase TERM 675 775728 - 775714 - g 78 -12.8 -3.53012 | opp_overlap 775699 775696 TCGCGGCGGCGGAAA CGGCGG GCG CCGCCG CGCTGCTGTTCGCCG Bphy_3810 775536 - 776102 + | hypothetical protein Bphy_3811 776099 - 776725 + | methylamine dehydrogenase accessory protein MauD Bphy_3812 776767 - 777312 + | amine dehydrogenase TERM 676 777364 - 777333 - g 71 -7.8 -4.20074 | gap 1, opp_overlap 777335, overlap 777334 AAACACACTGGAAAA TTCGCGGCCGTCTGC ATG GCGG-CGGCCGCGTC GTTCGCGATGACGGA TERM 677 777335 - 777362 + G 81 -17 -2.72344 | gap 1, opp_overlap 777334 777333 ACACACTGGAAAATT CGCGGCCGTCTGC ATG GCGG-CGGCCGCG TCGTTCGCGATGACG Bphy_3813 777309 - 777806 + | cytochrome c class I TERM 678 777873 - 777853 - g 93 -19.7 -3.02511 | opp_overlap 777854 777855 777856, overlap 777808 CGGACTCGCGCAACA GCCCGCGCG CGG CGCGCGGGC TGCCACGCCGTGGAT Bphy_3814 777803 - 778354 + | cytochrome c class I TERM 679 779512 - 779527 + G 78 -3.9 -4.72272 | AGCGGGCGGCAAGAT GCTCG ACAAGG CGGGC TTTTTCGTCGAGCCA Bphy_3815 778379 - 779884 + | aldehyde dehydrogenase TERM 680 780615 - 780598 - g 76 -9.1 -4.08216 | gap 1 TGACTTCGCGCAAAA GCG-CGGC TGG GCCGTCGC GGCGAGTTACAGCAA Bphy_3816 779993 - 781222 + | porin TERM 681 781245 - 781279 + T 86 -12 -3.9777 | overlap 781247 CACGGCGCGTGCAAT TCGCGCGTCTCGGGCC AGA GGCGTGAGACGCGCTC TTTGTCGATGTTGAA TERM 682 781247 - 781277 + T 100 -19 -3.57639 | overlap 781245 CGGCGCGTGCAATTC GCGCGTCTCGGGCC AGA GGCGTGAGACGCGC TCTTTGTCGATGTTG Bphy_3817 781605 - 781303 - | hypothetical protein Bphy_3818 782598 - 781681 - | diguanylate phosphodiesterase TERM 683 782885 - 782848 - g 81 -9.8 -4.26903 | gap 1 GGGACCTTATGAAAA CGCATCAGCTCCGCGCG CTGGT CGC-CGTAGCGGACGCG GGCAGCGTGCGCGGT Bphy_3819 782841 - 783791 + | LysR family transcriptional regulator Bphy_3820 784879 - 783788 - | 2-aminoethylphosphonate aminotransferase Bphy_3821 786063 - 784879 - | phosphonopyruvate decarboxylase TERM 684 786042 - 786013 - G 77 -15.7 -2.62396 | overlap 785989 CACGCCCGCATACCA GTCGAAGCCGCGC TCGC GCGCCGCCTCGAC GAACTGTGCTGCCTC Bphy_3822 787766 - 786060 - | phosphoenolpyruvate phosphomutase Bphy_3823 788850 - 790391 + | methyl-accepting chemotaxis sensory transducer TERM 685 790474 - 790450 - f 100 -12.2 -5.15634 | gap 1, overlap 790453 TATCCCACCAAAAAA GAAGGCGCTCG ATTG CGAGCGCCT-C ATCAACACGCCGCGT TERM 686 790472 - 790453 - f 100 -15 -4.67552 | overlap 790450 CCCACCAAAAAAGAA GGCGCTCG ATTG CGAGCGCC TCATCAACACGCCGC TERM 687 790613 - 790593 - f 75 -5.3 -4.59773 | opp_overlap 790599, overlap 790594 GCGCACGCGCAAAAA CCTGCGCGA AGC TCGCACCGA GATTACGTTCTTATT TERM 688 791384 - 791355 - g 72 -8.6 -4.07885 | gap 1 CACGCCCGCGCAAAA CGGCGCGACCGTC CATCT GACGATCG-ACCG GCGCATCCAGCAGCT Bphy_3824 790684 - 792420 + | peptidoglycan glycosyltransferase Bphy_3825 794148 - 792469 - | TPR repeat-containing protein Bphy_3826 794514 - 796247 + | putative hemagglutinin-related transmembrane protein Bphy_3827 796287 - 796598 + | hypothetical protein Bphy_3828 796828 - 797079 + | hypothetical protein Bphy_3829 797394 - 797152 - | hypothetical protein TERM 689 797342 - 797321 - G 73 -13.7 -2.81471 | gap 1, opp_overlap 797312 797311, overlap 797311 CAGAAGCGCACGACA CG-CGCCGGC ATT GCCGGCGTCG GTGCGAGCCATTTAT Bphy_3830 798003 - 797473 - | hypothetical protein TERM 690 798288 - 798314 + H 77 -13.6 -2.95942 | overlap 798290 798291 GCCAACGTGTTGCGT CTCGCGCGCGCG ACG CGTGTGCGCGCG TGCTTTCGCTATCGC TERM 691 798290 - 798316 + H 70 -12.3 -2.82327 | gap 1, overlap 798288 798291 CAACGTGTTGCGTCT CGCGCGCGCGAC GCGT GT-GCGCGCGTG CTTTCGCTATCGCCC TERM 692 798291 - 798317 + H 81 -12.3 -3.70902 | gap 1, overlap 798288 798290 AACGTGTTGCGTCTC GCGCGCGCG-AC GCGT GTGCGCGCGTGC TTTCGCTATCGCCCG Bphy_3831 798458 - 798742 + | hypothetical protein Bphy_3832 798748 - 799518 + | protein serine/threonine phosphatase Bphy_3833 800895 - 799543 - | putative sigma54 specific transcriptional regulator TERM 693 799710 - 799741 + g 81 -8 -4.56607 | gap 1, overlap 799711 799731 CCGCGACCGTCCCGC CGACTTCCTGCAAGC CGC GCT-GCAGGAAGGCC TTTTCTGCTTCGTCG TERM 694 799711 - 799740 + g 70 -11.5 -3.33241 | gap 1, overlap 799710 799731 CGCGACCGTCCCGCC GACTTCCTGCAAGC CGC GCT-GCAGGAAGGC CTTTTCTGCTTCGTC TERM 695 799745 - 799792 + g 74 -12.9 -3.2048 | gap 3, overlap 799731 799746 TGCAGGAAGGCCTTT TCTGCTTCGTCGCT-GGCGGCGCG CTT CGCGTCGCTGAGCGAC--AGCAGG TTCCTCACATTTGCG TERM 696 799746 - 799791 + g 70 -14.2 -2.51966 | gap 3, overlap 799731 799745 GCAGGAAGGCCTTTT CTGCTTCGTCGCT-GGCGGCGCG CTT CGCGTCGCTGAGCGAC--AGCAG GTTCCTCACATTTGC TERM 697 800674 - 800620 - G 84 -15 -3.36273 | gap 2, overlap 800616 GCCCTCGAAGATGAA GCTGCGCG-CGAGCAG-CGCCTGGCG TCGCG CGCCGCGCGACTGGTCGCCGCGCAAC GGCTCGACGACGGCC Bphy_3834 803948 - 800892 - | cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter Bphy_3835 804735 - 803983 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 698 804582 - 804598 + g 71 -4.3 -4.57569 | overlap 804583 GGATTTCGTCGGCGC TCACGGT CAC GCCGTGC TTTTTGGCGGCGTGC Bphy_3836 806206 - 804833 - | secretion protein HlyD family protein TERM 699 805625 - 805651 + g 70 -13.7 -2.60941 | overlap 805636 805648 CTTGTCCGCTTCCTG GCGCGCCGC ATCGCGTGC GCGGCGCGC GTTGTCCAGTGTACT TERM 700 805636 - 805652 + g 70 -11.5 -3.35438 | overlap 805625 805648 CCTGGCGCGCCGCAT CGCGTGC GCG GCGCGCG TTGTCCAGTGTACTG Bphy_3837 808754 - 806193 - | FHA domain-containing protein TERM 701 808448 - 808503 + g 84 -12.8 -3.7732 | gap 4, opp_overlap 808439 808437, overlap 808475 AGCACAGCTCGTCGC CGGCGCGCACGCG-CGACGGCGTCTGCC GCAC GGCA-ATGCCGTTGACG-GT-CGTGCCG TTCTTGCTGTCGAGA Bphy_3838 810513 - 809002 - | RND efflux system outer membrane lipoprotein TERM 702 809820 - 809840 + g 70 -2.6 -4.66537 | gap 1 CATAGATCGACAGAA TGGTGCGGT TCTC ATCG-ACCA TTTTCTGTTGCGCGA TERM 703 810241 - 810283 + g 74 -13.3 -3.28791 | opp_overlap 810273, overlap 810243 GAAGCCTTTCCACCA GTCGGGCACGATGGTGTCG GCGGG CGACACGAGCGAGCCCGTC TTGTCGGACCACGCT TERM 704 810243 - 810281 + g 83 -14.5 -3.21276 | opp_overlap 810273, overlap 810241 AGCCTTTCCACCAGT CGGGCACGATGGTGTCG GCGGG CGACACGAGCGAGCCCG TCTTGTCGGACCACG TERM 705 810753 - 810722 - R 79 -13.7 -3.14931 | opp_overlap 810702 810744 CGTAGTCTTCAGGAA GCCCGCGGAGGCT GGTCTG AACCTCCGCGGGT AACGCCGGGTGCTTA Bphy_3839 811035 - 810766 - | hypothetical protein Bphy_3840 811781 - 811353 - | hypothetical protein Bphy_3841 812269 - 811844 - | hypothetical protein Bphy_3842 812598 - 814448 + | hypothetical protein TERM 706 814476 - 814503 + T 79 -12.7 -3.24188 | opp_overlap 814465 814466, overlap 814465 AGAAGCCCGGGCACC GGCGCGCGC TTCTCAGTGC GCGCGCGCC TTGCTCGTGATCTGC Bphy_3843 816614 - 814488 - | serine/threonine protein kinase TERM 707 816727 - 816757 + H 83 -14.1 -3.14344 | gap 1, opp_overlap 816719 CAAACCAGGATTGGC CCGCGACACA-GGC GGAC GTCATGTGTCGCGG TTCATCCAACAGCTC TERM 708 816853 - 816884 + H 70 -3.7 -4.59109 | gap 1, opp_overlap 816829 816828, overlap 816854 GAACCGACCTCCTTC GTGCG-AAGCCTCG TGCAT CAAGGCTTACGCAG TTTTTCGCCAGTCTG Bphy_3844 817010 - 817279 + | hypothetical protein Bphy_3845 817371 - 817655 + | hypothetical protein Bphy_3846 817833 - 818057 + | hypothetical protein TERM 709 818077 - 818110 + F 81 -12.4 -3.74077 | GTTCTCTGTTTTCTT CACATGCCGCTTGC CTGATC GCTAGCGGCATGCG TTTGCATGTCTACGC Bphy_3847 818294 - 818599 + | hypothetical protein TERM 710 818611 - 818668 + F 85 -10.4 -4.3953 | gap 1, overlap 818607 818612 818614 CTGAGCGGCGCGGCG C-GTGAGGGCCTCTCTGTGAGGGCCTC TCTGT GAGGGCCTCTCTGTGAGGGCCTCTCTG TTTGTTGTGGTTGGA TERM 711 818612 - 818666 + F 100 -14.1 -3.79611 | overlap 818607 818611 818614 TGAGCGGCGCGGCGC GTGAGGGCCTCTCTGTGAGGGCCTC TCTGT GAGGGCCTCTCTGTGAGGGCCTCTC TGTTTGTTGTGGTTG TERM 712 818614 - 818664 + F 87 -15.3 -3.46387 | overlap 818607 818612 818611 AGCGGCGCGGCGCGT GAGGGCCTCTCTGTGAGGGCCTC TCTGT GAGGGCCTCTCTGTGAGGGCCTC TCTGTTTGTTGTGGT TERM 713 819354 - 819342 - g 71 -9.1 -3.70902 | CGCTGGAGATCGAAA TCGGC TAT GCCGA CGAAGCTCGCGTGCG Bphy_3848 818654 - 819526 + | hypothetical protein TERM 714 819584 - 819550 - T 71 -7.9 -3.97356 | AAAGCAAAACGCAAA CGGC-CGCACGCCAGAA AGG TACTG-CGTGCACGCCG CCGTCATCAGCCATC Bphy_3849 819887 - 819645 - | hypothetical protein TERM 715 819892 - 819920 + r 78 -8.1 -4.46112 | opp_overlap 819894 819895, overlap 819895 CGCCGCGCCAAATAA AAGGGTCCGGC AGAACTG GCCGGACCTTG TTTGTTTCAGTGCCG TERM 716 819918 - 819894 - R 93 -8.5 -4.86731 | opp_overlap 819892 819895, overlap 819895 CCGCGCCAAATAAAA GGGTCCGGC AGAACTG GCCGGACCT TGTTTGTTTCAGTGC TERM 717 819895 - 819917 + r 93 -12 -4.34285 | opp_overlap 819895 819894, overlap 819892 CGCGCCAAATAAAAG GGTCCGGC AGAACTG GCCGGACC TTGTTTGTTTCAGTG TERM 718 819917 - 819895 - R 77 -12 -3.51557 | opp_overlap 819892 819895, overlap 819894 CGCGCCAAATAAAAG GGTCCGGC AGAACTG GCCGGACC TTGTTTGTTTCAGTG Bphy_3850 820666 - 819947 - | histone family protein nucleoid-structuring protein H-NS TERM 719 820098 - 820124 + g 72 -3.6 -4.66609 | gap 1, overlap 820100 820104 ACACGCTTGCCAAGC GTCGGC-GCGG CAGATT TCGCAGCCGCC TTTTTAACTGCCGTC TERM 720 820255 - 820269 + g 81 -3.5 -5.09762 | overlap 820256 CTGCCTTCTTAGCGG TGGCT TTCTT AGCCG TTTTCTTTGTTGCAG TERM 721 820373 - 820404 + g 72 -13.1 -3.05963 | gap 1 CTTGATCCATGCCGG CGGGCG-AGCATGG CCACT CCATGTTGCGCCCG TCTTCGGATCGCGGT Bphy_3851 821017 - 823032 + | phosphoesterase PA-phosphatase related TERM 722 823026 - 823042 + F 72 -6.6 -4.29845 | opp_overlap 823025 ATTCGGATCGAAAGC GCGATA GGCCG TATCGC TTTTGACTTCCGTTA TERM 723 823426 - 823448 + G 71 -12.6 -3.27109 | opp_overlap 823393 823426 823425, overlap 823425 GGCGTCCGTCGAAAC GCGCATGCGC AAG GCGCGCGCGC TGTTCGTTCGGTTCG TERM 724 823530 - 823553 + G 70 -2.3 -4.65916 | overlap 823531 CCCCGCCGTTGATGG GCACGACGC GCGTCG GCATCGTGA TTTTCTTCGCGTGGG TERM 725 824138 - 824124 - g 81 -3.4 -5.02074 | CGATGCGTGAAAAAA GCCGCA CGT CGCCGC AGCAGCCGGGCATCA Bphy_3852 823145 - 824200 + | rhodanese domain-containing protein Bphy_3853 825310 - 824231 - | diguanylate cyclase TERM 726 827101 - 827088 - g 70 -2.3 -4.65895 | overlap 827096 CGTCTGATGGAAAAA GCGAA ACAG CCCGC GTTTGCAGCGGACGA Bphy_3854 825936 - 827525 + | phosphate transporter TERM 727 827545 - 827562 + T 100 -14.1 -4.0825 | opp_overlap 827545 GTCCAACGAAAAAAA GCGCGGC AGTT GCCGCGC TTCTTTCATTCAACC TERM 728 827562 - 827545 - T 100 -14.1 -5.63103 | opp_overlap 827545 GTCCAACGAAAAAAA GCGCGGC AGTT GCCGCGC TTCTTTCATTCAACC Bphy_3855 828526 - 827600 - | hypothetical protein Bphy_3856 829040 - 828654 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 729 829100 - 829069 - R 100 -21.6 -4.74504 | ATCCGAACGTAAAAA CAGCGGGCACCGCC CGTC GGCGACGCCCGCTG TCAAGCGAACCGGCT Bphy_3857 830916 - 829159 - | gamma-glutamyltransferase TERM 730 829608 - 829553 - G 72 -13.2 -3.05384 | opp_overlap 829594 829605 GTCGGTTCGATCGAA TTCGCGTCGCTGCCCACCACGCCGAA CATG TTCGGCACGCCAGGCTTCGATGCGAA GTCGTCCATTTCGTC TERM 731 830972 - 831002 + r 73 -11.1 -3.43049 | opp_overlap 830959 830974, overlap 830974 AGCGGGCATTTGCGA AACGGCCCAATGC TTGAT GCATAGGGCCGTA TTCATTCGCTTATTC TERM 732 830974 - 831000 + r 82 -13.7 -3.27511 | opp_overlap 830959 830974, overlap 830972 CGGGCATTTGCGAAA CGGCCCAATGC TTGAT GCATAGGGCCG TATTCATTCGCTTAT TERM 733 831000 - 830974 - R 83 -13.7 -3.55444 | opp_overlap 830974 830972, overlap 830959 CGGGCATTTGCGAAA CGGCCCAATGC TTGAT GCATAGGGCCG TATTCATTCGCTTAT Bphy_3858 832435 - 831026 - | aminotransferase class-III Bphy_3859 833977 - 832472 - | aldehyde dehydrogenase TERM 734 834025 - 834035 + r 100 -4.6 -5.7946 | overlap 834019 834018 834016 CACTTTAGTGGCGCT GCGC GCC GTGC TTTTTTTGTTCGCGG Bphy_3860 834617 - 834147 - | AsnC family transcriptional regulator Bphy_3861 835670 - 834633 - | ectoine utilization protein EutE Bphy_3862 836886 - 835675 - | ectoine utilization protein EutD Bphy_3863 837897 - 836896 - | ectoine utilization protein EutC Bphy_3864 838886 - 837894 - | ectoine utilization protein EutB Bphy_3865 840439 - 839042 - | transcriptional regulator TERM 735 840297 - 840345 + g 77 -11.1 -3.71873 | gap 3, overlap 840286 ATCGCGAGTTCCGAC GCGACGTCGC-GCTGCGGCGGC AGACGCGC GCCGGCGC-GCAGCGAC-TCGC TTTCGATGTCGCTGG Bphy_3866 840679 - 841533 + | ectoine/hydroxyectoine ABC transporter solute-binding protein Bphy_3867 841729 - 842400 + | ectoine/hydroxyectoine ABC transporter, permease protein EhuC Bphy_3868 842397 - 843056 + | ectoine/hydroxyectoine ABC transporter, permease protein EhuD Bphy_3869 843053 - 843940 + | ectoine/hydroxyectoine ABC transporter, ATP-binding protein TERM 736 843947 - 843976 + T 74 -13.5 -2.52623 | overlap 843946 843945 843966 843970 GCTGTTTGAGGTGTG GCGCGGGGTTCGC AGCA GCGAGCGTCGCGC GTGTTCTACGCCCGC Bphy_3870 845385 - 843982 - | major facilitator transporter Bphy_3871 846377 - 845613 - | hypothetical protein Bphy_3872 847388 - 846399 - | membrane protein Bphy_3873 848269 - 847400 - | 2OG-Fe(II) oxygenase Bphy_3874 848877 - 848266 - | CDP-alcohol phosphatidyltransferase TERM 737 849588 - 849558 - g 73 -12.4 -3.4252 | GGGCAGCGACGAGAA GGTGCAAGCCGCCG TGA CGGCGGCGGGCAGC AGCGCCATCGTCCAT TERM 738 849596 - 849628 + G 78 -7.8 -4.36914 | gap 2 CGGGCAGCAGCGCCA TCGTCCATCACGTCGC GCC GC-ACGTGACGG-CGA TTTTCTGCAAGCGCA Bphy_3875 849247 - 849648 + | hypothetical protein TERM 739 851486 - 851506 + F 76 -12.5 -3.02461 | TCCTGATTTATTTAC GCAGCCAGC ACG GCTGGCCGC TATTGCAGCAGCTTC TERM 740 852224 - 852175 - g 93 -17.9 -3.68351 | gap 1, overlap 852177 852210 CTCGTACTACCGAAA GAGGCCGCCGCCGAACTCTTCGAA TTG TCCGAAGA-CGCGGCAGCGGCCGC GATCCGCACGACGCG TERM 741 852222 - 852177 - g 100 -19.1 -3.42395 | gap 1, overlap 852175 852210 CGTACTACCGAAAGA GGCCGCCGCCGAACTCTTCGAA TTG TCCGAAGA-CGCGGCAGCGGCC GCGATCCGCACGACG Bphy_3878 852034 - 852462 + | histidine triad (HIT) protein Bphy_3879 852993 - 852490 - | hypothetical protein TERM 742 853253 - 853238 - H 100 -11.8 -6.28631 | TAAAGCAAAAAAAAA GCGGCC CGAA GGCCGC TGAAAAACAGATGAA Bphy_3880 853689 - 854843 + | porin TERM 743 854927 - 854953 + F 100 -20.9 -4.85782 | opp_overlap 854927, overlap 854944 CAGCGCAACACCTAA CGCGCGCGTGC ATCCA GCACGCGCGCG TTTCTTTTTGCCCAA TERM 744 854953 - 854927 - f 100 -20.9 -3.19026 | opp_overlap 854927 854944 CAGCGCAACACCTAA CGCGCGCGTGC ATCCA GCACGCGCGCG TTTCTTTTTGCCCAA Bphy_3881 855116 - 855538 + | hypothetical protein Bphy_3882 855528 - 856079 + | hypothetical protein TERM 745 856115 - 856137 + F 91 -8.3 -5.0538 | overlap 856113 856117 856128 856129 CCATACCTGCAGTCA CGGCCCGCG TATTT CGCGGGCTA TTTTTTCGCCTGCGC TERM 746 856117 - 856135 + F 93 -13.1 -4.15748 | overlap 856113 856115 856128 856129 ATACCTGCAGTCACG GCCCGCG TATTT CGCGGGC TATTTTTTCGCCTGC Bphy_3883 856163 - 856720 + | hypothetical protein Bphy_3884 858029 - 856857 - | FAD dependent oxidoreductase Bphy_3885 859652 - 858153 - | aldehyde dehydrogenase TERM 747 859107 - 859120 + g 83 -9.5 -4.37658 | overlap 859100 859109 CTGGTTGACCGCGAG CGCCG TCAG CGGCG TTTTCTCCGACGGTT Bphy_3886 859986 - 860618 + | XRE family transcriptional regulator TERM 748 860673 - 860630 - T 75 -11.8 -3.27511 | opp_overlap 860638 860644, overlap 860638 860644 ATAAGCGAAGTAACA CCATTGAAGAAAAAGGCCTG AATT CAGGCCTTTTTCTTATGCGG CCGAGCGCGCCTGCG TERM 749 860638 - 860665 + T 90 -17.2 -3.28712 | opp_overlap 860630 860638 860644, overlap 860644 AGTAACACCATTGAA GAAAAAGGCCTG AATT CAGGCCTTTTTC TTATGCGGCCGAGCG TERM 750 860665 - 860638 - T 89 -17.2 -3.137 | opp_overlap 860638 860644, overlap 860630 860644 AGTAACACCATTGAA GAAAAAGGCCTG AATT CAGGCCTTTTTC TTATGCGGCCGAGCG TERM 751 860659 - 860644 - T 100 -10.4 -5.11063 | opp_overlap 860644 860638, overlap 860638 860630 ACCATTGAAGAAAAA GGCCTG AATT CAGGCC TTTTTCTTATGCGGC TERM 752 860644 - 860659 + T 100 -10.4 -5.18726 | opp_overlap 860638 860630 860644, overlap 860638 ACCATTGAAGAAAAA GGCCTG AATT CAGGCC TTTTTCTTATGCGGC Bphy_3887 861793 - 860666 - | 4-hydroxyphenylpyruvate dioxygenase TERM 753 860811 - 860792 - G 74 -5 -4.58685 | gap 1, overlap 860798 AAAGGTCTGGAAAAA CAGA-AGCG GCA CGCCGTCTG CGCCGATCTCGCCGT Bphy_3888 863018 - 861909 - | LysR family transcriptional regulator TERM 754 862475 - 862422 - G 90 -11.5 -4.33151 | gap 1, overlap 862424 CACGACAACGCAAAA GTCGAGCAGCTGCGTGGCCGGCGACG TCC CGCCCGCGGCCA-GCGGATGCCCGGC ACGCACGACGGCGAT Bphy_3889 863127 - 863831 + | protocatechuate 3,4-dioxygenase, beta subunit Bphy_3890 863834 - 864424 + | protocatechuate 3,4-dioxygenase, alpha subunit TERM 755 864548 - 864565 + T 100 -9.8 -5.40072 | GAGCAGTACTTGGAT GCCCGC TTCGAC GCGGGC TTTTTTTCGCCCCCC Bphy_3891 865386 - 864601 - | class II aldolase/adducin family protein Bphy_3892 865722 - 865468 - | hypothetical protein TERM 756 866589 - 866561 - R 75 -12.4 -3.21772 | overlap 866559 AATGCCCTCAGAACA CCGTGCGCCTGA AGCGG TCAGACGCGCGG CAGATCGTCGATGAA Bphy_3894 866898 - 866578 - | hypothetical protein Bphy_3895 867246 - 866935 - | hypothetical protein Bphy_3896 867258 - 868154 + | hypothetical protein TERM 757 869190 - 869214 + G 77 -15.7 -2.52464 | ATCGACGCGCACGCC GCAGGCCAACC CGC GGTCGGCCTGC TCGCTTCGGGGCAAG Bphy_3897 868296 - 869759 + | hypothetical protein TERM 758 870072 - 870056 - g 75 -4.3 -4.59773 | overlap 870057 CGCCACGCTTAAAAA CGCGGAG GCG CTGCACG TGCCGCTGCATCAAC Bphy_3898 869778 - 870596 + | hypothetical protein Bphy_3899 873071 - 870606 - | peptidoglycan glycosyltransferase TERM 759 873068 - 873051 - G 71 -4.1 -4.57073 | overlap 873052 TATTTCCCGGAAAAA CGACAGT ACTG ACTGTCT CACGCTAACGCACCA TERM 760 873215 - 873175 - R 84 -2.4 -5.42259 | gap 1, overlap 873176 TCACCGCCAAAAAAA TCGGCCGGTCCCGCGCCGC TTGC GCAG-ACAAACTCGGCCGA TGCATACGGTTAACG Bphy_3900 874711 - 873236 - | Na+/solute symporter Bphy_3901 874905 - 874708 - | hypothetical protein Bphy_3902 875991 - 875101 - | LysR family transcriptional regulator TERM 761 875267 - 875222 - G 86 -13.5 -3.83998 | gap 3, overlap 875210 GGAGGCGAGACGAAA TCGCCG-AGCACTTCGACGAGC TTGCC GCTCG-CGA-GCGCTTCGGCGA CGATGAACTCCGGCA Bphy_3903 876160 - 876885 + | pirin domain-containing protein Bphy_3904 876928 - 877338 + | DoxX family protein TERM 762 877368 - 877387 + F 100 -16.4 -3.81146 | CATTGCAGTGCTCAA GGGCGGCC TCAT GGCCGCCC TTATTCATTCCGCAC TERM 763 878132 - 878093 - g 71 -7.6 -4.12902 | opp_overlap 878101 CAACTACTTCGAAAA CGCATGGCTGCCCGTCGC GCTC GGGGCGGGCCTCTATGCG GACAATGCCGTGAAA Bphy_3905 877554 - 878795 + | porin TERM 764 878914 - 878952 + F 80 -10.5 -3.9644 | gap 1, opp_overlap 878927, overlap 878917 CACATACATCTTGCG TAACTGTGATATACAGGG AAAA CCC-GTAAATCGCAGTTA TTCTTCTATTGCAGA TERM 765 878917 - 878949 + F 74 -7.8 -4.10144 | gap 1, opp_overlap 878927, overlap 878914 ATACATCTTGCGTAA CTGTGATATACAGGG AAAA CCC-GTAAATCGCAG TTATTCTTCTATTGC TERM 766 879540 - 879554 + G 75 -6.4 -4.44667 | CCGTGCCCGCATTCT TCGTCT ACG GGACGA TTTATTCTTCAAGCG Bphy_3907 879293 - 880327 + | fatty acid desaturase Bphy_3908 880365 - 880712 + | Rieske (2Fe-2S) domain-containing protein Bphy_3909 880709 - 881956 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bphy_3910 881953 - 882462 + | hypothetical protein Bphy_3911 883532 - 882459 - | LacI family transcription regulator TERM 767 884300 - 884316 + G 91 -7.2 -5.00616 | ATCGACCCGGCCGAA GCGGCG CGTGC CGTCGC TTTTTTGGCAAGCAG Bphy_3912 883607 - 884434 + | short-chain dehydrogenase/reductase SDR Bphy_3913 885396 - 884482 - | LysR family transcriptional regulator Bphy_3914 886160 - 886369 + | hypothetical protein Bphy_3915 886480 - 886998 + | phasin family protein TERM 768 887052 - 887030 - f 78 -11.2 -3.74519 | opp_overlap 887045 887049 AACAGTTGTAGGAAA CCGGACGCGA TCC CCGCGTCAGG CGCATTTTGAGCCCG TERM 769 887063 - 887080 + F 100 -12.7 -5.86061 | overlap 887049 TCAGGCGCATTTTGA GCCCGCT TTCG AGCGGGC TTTTTTTTCATCGCG Bphy_3916 887096 - 887452 + | hypothetical protein TERM 770 887629 - 887612 - g 70 -7.7 -3.9693 | gap 1 CAGCGAGGCAAAGAA GCGG-GAG ATT CTCGCCGC GATGATTGGATTGCG TERM 771 887852 - 887818 - g 80 -13.7 -3.31144 | gap 1, overlap 887819 CGTTCACGCCGACAA CGGGCGAAGCGTACGC GCAG GCGTACA-TTCGCCCA CTCGCGCCGACGCTC TERM 772 887851 - 887819 - g 74 -15 -2.58544 | gap 1, overlap 887818 GTTCACGCCGACAAC GGGCGAAGCGTACGC GCAG GCGTACA-TTCGCCC ACTCGCGCCGACGCT TERM 773 888375 - 888321 - g 71 -9.3 -3.73072 | gap 2, overlap 888349 AATGGGTCGACCAAA CCGACAGT-C-ATGCTCGTCGGTGGCG AAA CACGGCCGACGATCATCGTACAGTCGG GCGACAAGCCGCCCG Bphy_3917 887484 - 888551 + | hypothetical protein TERM 774 888600 - 888573 - T 100 -14.2 -4.56597 | gap 1, opp_overlap 888551 CGCCCGCTGTAAAAA GCGGGG-TGCACG CTT CATGCAACCCCGC CGCGTGACAGCTGTG Bphy_3918 888981 - 888643 - | hypothetical protein Bphy_3919 889257 - 890012 + | acetoacetate decarboxylase Bphy_3920 890962 - 890075 - | 2-dehydropantoate 2-reductase TERM 775 890444 - 890402 - G 88 -15.6 -3.34962 | opp_overlap 890441, overlap 890441 CGTGATAGCCGACAA CGCGTTGTATGCGCAGTTGA GAA TCAGCTTCGCCCACAACGCG CCGCGCACGTTGTCC Bphy_3921 891940 - 891050 - | alpha/beta hydrolase fold protein TERM 776 891517 - 891529 + g 71 -10.5 -3.56092 | GGCGCAGTTCGTTTT CCGGC AAC GCCGG TTTCGCCGATGCTGC TERM 777 891720 - 891687 - G 71 -9.5 -3.73072 | gap 1 AACGCGTCGAGCAAA GCGAGCAGATCGGCGC CGA GCGCAG-CCTGCTGGC CAGAGCGCGGCGTAT TERM 778 891770 - 891749 - G 82 -4.3 -5.06816 | overlap 891750 891751 ATCGGCGAACAAAAA GCGCGTC GGCCTATA GCCGCGC AGATAAGGCGCGATC TERM 779 891868 - 891851 - G 71 -9.1 -3.71645 | AATGTCATACGGAAA GCCGTGC AGCA GCACGAC GGGCCAACCGTCCGG TERM 780 892948 - 892921 - g 73 -9.8 -3.83026 | gap 1, opp_overlap 892921, overlap 892922 TGGCCGCACACGAAA CGCATGCGAGCGC ATC GGGC-CGCACGCG TCTTGCACGCGGACT Bphy_3922 892221 - 893555 + | major facilitator transporter Bphy_3923 894645 - 893575 - | glycosyl transferase group 1 TERM 781 894625 - 894647 + g 93 -3.4 -5.43866 | GTACTTCAGTGCATT GCACGACAAT CCG ATTTTCATGC TTTTTTTCGAGCTTC Bphy_3924 895637 - 894720 - | glycosyl transferase family protein TERM 782 895141 - 895123 - G 74 -10.2 -3.73775 | opp_overlap 895124, overlap 895124 CCCAGCGCGATGAAA CGCGCTGG CGA CCAGCGCT TGTCGTGCGTGCTCG TERM 783 895140 - 895124 - G 73 -13.7 -2.84051 | opp_overlap 895124, overlap 895123 CCAGCGCGATGAAAC GCGCTGG CGA CCAGCGC TTGTCGTGCGTGCTC TERM 784 895124 - 895140 + g 81 -13.7 -3.42996 | opp_overlap 895124 895123 CCAGCGCGATGAAAC GCGCTGG CGA CCAGCGC TTGTCGTGCGTGCTC TERM 785 895566 - 895548 - G 70 -11 -3.31188 | overlap 895541 CACGATAACCATCAA GATCAGCG AAT CGCCGATC GCGTTCGACATCATG Bphy_3925 896598 - 895639 - | hypothetical protein TERM 786 896783 - 896807 + r 100 -4.9 -5.78622 | overlap 896784 GTTCACCTTTCCGCT TTGCGCCGCTG TTC TACTGGCGCAG TTTTTTTTCCGGTAC TERM 787 896967 - 896986 + r 85 -9.2 -4.41548 | opp_overlap 896950 896968, overlap 896968 CAAGCAATGCGAAAA AGCCCGCT TGAA AGCGGGCC TTTTATCGCGTATCA TERM 788 896985 - 896968 - R 100 -12.7 -4.68506 | opp_overlap 896967 896968, overlap 896950 AAGCAATGCGAAAAA GCCCGCT TGAA AGCGGGC CTTTTATCGCGTATC TERM 789 896968 - 896985 + r 79 -12.7 -3.24447 | opp_overlap 896950 896968, overlap 896967 AAGCAATGCGAAAAA GCCCGCT TGAA AGCGGGC CTTTTATCGCGTATC Bphy_3927 897871 - 897035 - | two component transcriptional regulator TERM 790 898140 - 898119 - H 76 -3.5 -4.93696 | overlap 898120 GTGAAACATGAAAAA CGGCGGCCG TGGG CGCTCGCCA TGAGAGTCGGCATTA TERM 791 898450 - 898425 - g 77 -16.1 -2.58714 | overlap 898421 CCCGATATGAACCCA CCGGGCGACGG ACCA CCGCCGCCCGA CACCGCCCCGCCCTA TERM 792 899281 - 899266 - g 74 -2.6 -4.77165 | gap 1 TCGCCGACAAGAAAA TCGCGTT GGA AACG-GA TATCGGCGAAGCGAG Bphy_3928 898140 - 899663 + | integral membrane sensor signal transduction histidine kinase Bphy_3929 899656 - 900399 + | two component transcriptional regulator Bphy_3930 900691 - 900434 - | hypothetical protein Bphy_3931 900991 - 900761 - | hypothetical protein Bphy_3932 902028 - 901207 - | hypothetical protein TERM 793 901649 - 901674 + g 79 -2.6 -5.02074 | gap 1, opp_overlap 901640, overlap 901657 AATTCAGTGGGCGAC GAGCA-CACCA GTGCA TAGTGCTGCTC TTTTTTCCGCCCTGA TERM 794 901919 - 901909 - G 80 -4.6 -4.83615 | overlap 901911 GACGCCCCATAAAAA GCGA CCG CCGC CCAGACGCCGCTCCC Bphy_3933 902119 - 902463 + | hypothetical protein Bphy_3934 904362 - 902572 - | acyl-CoA dehydrogenase domain-containing protein Bphy_3935 905559 - 904546 - | AraC family transcriptional regulator TERM 795 905347 - 905314 - G 80 -13.9 -3.35197 | opp_overlap 905337 GCTGAGAGAGAGGAA TTTCAGCGTGCCGCT GCGA AGCGGCCGGCTGAAA ATGCCCGGCATTTCG Bphy_3936 907401 - 905596 - | zinc finger SWIM domain-containing protein TERM 796 905871 - 905905 + g 73 -5.6 -4.44797 | gap 1, opp_overlap 905838, overlap 905872 ACAATGCCGTCGCGA TGGGGCCGCC-GGTG AACACC CGCCAGGCTGCCTCG TTTTCATGTTCGTCG TERM 797 905998 - 906030 + g 72 -2.8 -4.60924 | overlap 906022 CAGCTTCGACTCCTC GCGCTCGACG-ATG GCCCACA TATGCG-CGAGCGC TTTTTCCCGCGTTTC Bphy_3938 909487 - 907685 - | acyl-CoA dehydrogenase domain-containing protein TERM 798 910687 - 910649 - R 72 -9.4 -3.64049 | overlap 910653 TGAAGAAGTTTGAAA CCGAGTGGATCACGGCCC GAG AGGCCGCACGGCACTCGG GGACGAAGTTCCACG TERM 799 911112 - 911091 - R 100 -9.3 -5.11112 | opp_overlap 911088 911091 AAAGGCCAACAAAAA GACCCGGTC TGAA GGCCGGGCC TAATTAGTCGATTGG TERM 800 911193 - 911149 - R 100 -16 -5.23316 | gap 2 TACTACACGAAAAAA GAGGCTTCTGGGATCGCTTCGC TGA GCAAAACGATCC--GAAGCCTC GATGTAGCGCTATCA Bphy_3941 913284 - 911227 - | RNA polymerase, sigma 70 subunit, RpoD TERM 801 911637 - 911651 + g 71 -9.2 -3.73402 | CCAGCGTTGCCGGAT CCGGCT CCA GGCCGG TTTCCTGCAGAATCT TERM 802 913111 - 913147 + g 78 -3.1 -4.86731 | gap 3, overlap 913112 913112 CTCCTCGACGGTGCC AG-GCTGC-GAA-GACGC GAAC GCGTCCTTCAGCAGCGCC TTTTCTTTAGCGCGG Bphy_3942 915602 - 913710 - | DNA primase Bphy_3943 916151 - 915705 - | hypothetical protein TERM 803 916238 - 916212 - R 100 -13.1 -4.64766 | gap 1, opp_overlap 916212 TGCAGAGCGCAAAAA CCCGCTTG-GGA TCGT TCCTCAAGCGGG TTAGTGCCAAATACG TERM 804 916212 - 916238 + r 76 -13.1 -3.14931 | gap 1, opp_overlap 916212 TGCAGAGCGCAAAAA CCCGCTTG-GGA TCGT TCCTCAAGCGGG TTAGTGCCAAATACG Bphy_3944 916659 - 916447 - | ribosomal protein S21 TERM 805 916569 - 916582 + g 75 -8.1 -4.22883 | CGCGGGCACGCAATT CGGTC AGCA GACCG TTCTTTTCAATCGTG Bphy_3945 917986 - 916769 - | hypothetical protein Bphy_3946 918101 - 919126 + | glycoprotease family metalloendopeptidase TERM 806 919141 - 919151 + T 90 -4.6 -5.40072 | overlap 919139 919138 AGGGTTTGGCTTTGG CTGG TAG CCGG TTTTTTTGCGCCGGC Bphy_3947 920012 - 919206 - | hypothetical protein TERM 807 920078 - 920059 - R 100 -16.4 -3.68359 | overlap 920053 CGCGCAAAATGACAA CCGCCGGC TTGC GCCGGCGG AGCCCGGCGGGTACG TERM 808 920083 - 920103 + r 74 -14 -2.55668 | overlap 920082 TGCGCCGGCGGAGCC CGGCGGGT ACGCG ACCCGCCG ATTCATATCGGAGTA Bphy_3948 922058 - 920160 - | deoxyxylulose-5-phosphate synthase TERM 809 921242 - 921264 + g 77 -13.5 -3.41745 | opp_overlap 921246, overlap 921246 TCGTCACGACGTGCA GGAACTGCG GACCG CGCAGTTCC TTGATGTTCTGCAGC Bphy_3949 923030 - 922155 - | polyprenyl synthetase Bphy_3950 923362 - 923045 - | exodeoxyribonuclease VII, small subunit Bphy_3951 923649 - 924755 + | Rieske (2Fe-2S) domain-containing protein TERM 810 924801 - 924818 + F 100 -12.7 -5.64421 | opp_overlap 924801 CTATGAACGAGGAAA GACGGGC TTCG GCCCGTC TTTTTTGTTTAGACT TERM 811 924818 - 924801 - f 87 -12.7 -3.85704 | opp_overlap 924801 CTATGAACGAGGAAA GACGGGC TTCG GCCCGTC TTTTTTGTTTAGACT Bphy_3952 924880 - 925752 + | rhodanese domain-containing protein Bphy_3953 926886 - 925816 - | Glu/Leu/Phe/Val dehydrogenase dimerisation region TERM 812 926909 - 926955 + H 70 -12.3 -2.79183 | gap 1, opp_overlap 926929 926933 CCTTCCTTGTGGGCA GGCGGTTGAGTCTGCGCAAAGC GATC GCTTCGCGCAGGCT-GGCCGCA TGTCATCCGGGTCGC TERM 813 927136 - 927115 - H 74 -6.7 -4.42851 | gap 1, overlap 927117 CCAACAAACTTAAAA TATGAAGACG GAT CGTCTTCA-A CGGAGACAGCATGAA TERM 814 927135 - 927117 - H 83 -11.8 -3.80537 | overlap 927115 AACAAACTTAAAATA TGAAGACG GAT CGTCTTCA ACGGAGACAGCATGA Bphy_3954 927147 - 927605 + | AsnC family transcriptional regulator Bphy_3955 929574 - 927637 - | diguanylate cyclase/phosphodiesterase TERM 815 929712 - 929749 + r 82 -14.1 -2.87132 | opp_overlap 929701 929706 929740 GATACGAGACGGATT CTCGCGCCGATCATTCG CGCG CGAACGAGCCGCGCGAG TGTCTCCGCGACGCG Bphy_3956 931433 - 929841 - | YidE/YbjL duplication TERM 816 931450 - 931466 + r 73 -12.3 -3.08679 | opp_overlap 931458 TTCGCTCCACCTCTT GCAAGCG ATG CGCTTGC TGTTAGCTAACGAAA Bphy_3957 932981 - 931581 - | histidine kinase Bphy_3958 933711 - 932998 - | two component transcriptional regulator TERM 817 933730 - 933742 + H 82 -9.1 -4.42653 | opp_overlap 933738 CGCGCGATTGTAAGT CGGCA CAA TGCCG TTTTCTGCATCGGGT Bphy_3959 933883 - 934893 + | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein Bphy_3960 934938 - 935735 + | ABC transporter related Bphy_3961 935760 - 936623 + | binding-protein-dependent transport systems inner membrane component TERM 818 936659 - 936677 + F 100 -13.1 -5.52384 | TTTTGTAGTTGCACA GCGCCCC TGTAT GGGGCGC TTTTTTTCGTCGAAA Bphy_3962 936789 - 937466 + | two component heavy metal response transcriptional regulator TERM 819 937483 - 937528 + G 71 -12.1 -3.23216 | gap 4 GCGCGGCCGCTCGAT CACCACCA-CG-C-TCGCGCTCG CATT CG-GCGCGACGACGCTGGTGGTG TTCGTGCTGGTCGGC TERM 820 937900 - 937885 - g 77 -4.6 -4.65895 | overlap 937887 CGTCGGATGGAAAAA CAGCAC CGGC GCGCCG ATACGCGGCGTCGCA TERM 821 938658 - 938640 - g 78 -10.2 -4.00124 | CACGCGACAAGGAAA TCGCGCTC GAC GCGCGCGA GGCCGGCGACGGCGT Bphy_3963 937466 - 938929 + | heavy metal sensor signal transduction histidine kinase Bphy_3964 940302 - 938968 - | integral membrane sensor signal transduction histidine kinase Bphy_3965 940961 - 940299 - | two component transcriptional regulator TERM 822 941062 - 941037 - R 83 -14.7 -3.14564 | opp_overlap 941042 CTATGGCTTCATGAA CGCGCGTCAGC TCGC GCTCACGCGCG GCGCACTGGTTGCAG Bphy_3966 941495 - 941043 - | ferric uptake regulator family protein Bphy_3967 942059 - 941640 - | hypothetical protein Bphy_3968 942337 - 943239 + | ubiquinol oxidase, subunit II Bphy_3969 943242 - 945248 + | cytochrome o ubiquinol oxidase, subunit I TERM 823 945800 - 945820 + G 77 -4.7 -4.66057 | TTCTGGCACTTCCTG GACATCG TCTGGAT CGGTGTC TTTTCGTTTGTCTAT Bphy_3970 945248 - 945853 + | cytochrome o ubiquinol oxidase, subunit III Bphy_3971 945854 - 946198 + | cytochrome o ubiquinol oxidase subunit IV Bphy_3972 946593 - 946285 - | hypothetical protein TERM 824 946619 - 946644 + H 74 -6.1 -4.55295 | opp_overlap 946624, overlap 946620 CAAATAGTCGCGCCA AGTCAGTGGAA GCGC TTCCACTGCCA TTTGTTTGTGCACCG TERM 825 946739 - 946720 - H 93 -5.7 -5.47159 | opp_overlap 946727, overlap 946722 CGCAATAAATAAAAA TCGCGCT TGTGGC AGCGCAA CATTATAATTTTGAG TERM 826 947402 - 947431 + G 72 -2.8 -4.66418 | gap 2, opp_overlap 947408, overlap 947395 947409 GATCGGCACGTGGGG CGAACAGCGCCGCG TCTA TGCGGC-C-GTGCG TTTCTTCTTCTTTTC Bphy_3973 946932 - 948467 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 827 948491 - 948511 + F 100 -16.1 -5.27335 | opp_overlap 948481 ACCGACCGCATTCGA CGGGCGTCC ACT GGGCGCCCG TTTTTCTTTGCGCCA Bphy_3974 948833 - 949951 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Bphy_3975 949982 - 950797 + | binding-protein-dependent transport systems inner membrane component Bphy_3976 950794 - 951567 + | ABC transporter related TERM 828 951767 - 951746 - g 79 -2.1 -5.00884 | overlap 951747 ATGCCGCCGAAAAAA GCGAGCGGA TGAA TCTGCCCGA CACGCTCAAGTGTCA Bphy_3977 951604 - 952311 + | hypothetical protein Bphy_3978 952327 - 952971 + | hypothetical protein TERM 829 954331 - 954290 - g 73 -13.8 -2.91264 | gap 1, opp_overlap 954301 CTGCGCATTGACACA TGGATCGAAGC-GGGCTGC GAAGT GCCGCCCTGGTTCGATCCA ATGCTCGCGAAGCTG TERM 830 955298 - 955336 + G 71 -7.3 -4.13246 | gap 1 TTCACGGGCGACATG CCCGT-GATCCTCGGTCC GGAT GGCCCGAGCCTCGGCGGG TTTGTCTGTCCCGTC Bphy_3979 953168 - 956779 + | urea carboxylase TERM 831 957693 - 957675 - g 75 -10.2 -3.90744 | opp_overlap 957676 CGGCGCTCGAAACAA TCGGCGGC GAG GCCGTCGA AATCGACTTCGCGCC TERM 832 957703 - 957726 + G 80 -14.6 -3.05997 | opp_overlap 957700, overlap 957676 957698 CGTCGAAATCGACTT CGCGCCGTTT CTCG AAGCGGCGCG TCTGCTTTATGAAGG TERM 833 958303 - 958339 + G 74 -15.2 -2.64422 | overlap 958294 GCAGTTGCGCTCGCG TGGCGCGC-GGCTCGTCG AAG CGACG-GCCAGCGCACCA TGCTATCGGCTGTAT Bphy_3980 956822 - 958651 + | allophanate hydrolase TERM 834 958696 - 958668 - f 100 -14.5 -4.08394 | overlap 958669 ACAGCCGTTGCAAAA TGCGGCGCGCG TGCGATG CGCGCGCCGCT CGCTCAAGTCGTCGC TERM 835 958695 - 958669 - f 91 -18 -3.04715 | overlap 958668 CAGCCGTTGCAAAAT GCGGCGCGCG TGCGATG CGCGCGCCGC TCGCTCAAGTCGTCG TERM 836 959261 - 959248 - g 74 -2.3 -4.72272 | GGCGTGCAGGAAAAA GCCCG TTCG CAGAC CTTTCGCGACTACCG Bphy_3981 959017 - 959691 + | antibiotic biosynthesis monooxygenase Bphy_3982 960559 - 959696 - | short-chain dehydrogenase/reductase SDR Bphy_3983 960916 - 961335 + | hypothetical protein Bphy_3984 961370 - 961702 + | hypothetical protein Bphy_3985 961966 - 962163 + | hypothetical protein TERM 837 962172 - 962196 + T 86 -15.7 -2.70932 | overlap 962190 962193 CCGCTGACCGACGCC GCGAGCGCTAC CCG GTTGCGCTCGC TCGTTCGCACGCGCC Bphy_3986 963076 - 962243 - | CHAD domain-containing protein TERM 838 962532 - 962546 + g 74 -12.8 -3.18681 | opp_overlap 962513, overlap 962514 TAGTCCGAGCGTTTG GCGCGC GCC GCGCGC TTCATGCGCTTCGCC Bphy_3987 963700 - 963200 - | protein tyrosine phosphatase Bphy_3988 964376 - 963972 - | peptidylprolyl isomerase FKBP-type TERM 839 964560 - 964542 - R 80 -10.3 -4.07568 | opp_overlap 964556 TCGCGGGCTGGAAAA GCCGCTA ACGCG TAGCGGC CCGAAGCCTCGTTCG Bphy_3989 965110 - 964577 - | alkylhydroperoxidase Bphy_3990 965314 - 966213 + | hypothetical protein Bphy_3991 966753 - 966535 - | hypothetical protein Bphy_3992 967159 - 967632 + | response regulator receiver protein Bphy_3993 967721 - 969274 + | phospholipase D/transphosphatidylase Bphy_3994 969300 - 969548 + | hypothetical protein Bphy_3995 970444 - 969551 - | LysR family transcriptional regulator Bphy_3996 970520 - 971278 + | hypothetical protein Bphy_3997 971686 - 971267 - | hypothetical protein Bphy_3998 972400 - 971735 - | hypothetical protein TERM 840 972167 - 972145 - G 82 -15.6 -3.13403 | overlap 972125 972143 TGCCGCCGACGAACA CCACGTCGCG ATC CGCGACATGG GCGATATACACGTCG TERM 841 972935 - 972948 + G 74 -5.2 -4.56597 | overlap 972925 GCCTGGCGCAGTTCG CGCG CAACTT CGCG TTTTTCGACGCACCG TERM 842 973225 - 973197 - g 82 -15.9 -3.14344 | opp_overlap 973202 GAGTGCCGCGATCAA CCAGTGGCGCGCG CAG CGCGCGCCTTTGG ATGAGTTCGCGCAAT TERM 843 973202 - 973220 + G 93 -17.4 -3.68619 | opp_overlap 973197 CCGCGATCAACCAGT GGCGCGCG CAG CGCGCGCC TTTGGATGAGTTCGC Bphy_3999 972583 - 973254 + | nitroreductase Bphy_4000 973495 - 973983 + | sensor protein Bphy_4001 975539 - 974076 - | catalase TERM 844 976651 - 976666 + G 70 -2.4 -4.66987 | overlap 976648 976653 976660 CACCGATCTCTATTG CCCGTG GGCG CGCGAG TTTTCTTGCGATCTG Bphy_4002 975971 - 976849 + | RpiR family transcriptional regulator Bphy_4003 976855 - 977421 + | peptidase M15D vanX D-ala-D-ala dipeptidase TERM 845 977953 - 977938 - g 88 -9 -4.6902 | GCAGAACGTGAAAAA GGTCGA CGAC TCGACC GTCAGCATCACGACA TERM 846 978273 - 978253 - g 72 -9 -4.07568 | gap 1, overlap 978235 TCTGCTGCTCGAAAA CG-GCGACG CAGA CGTCGCGCG CAATCTGAGCCCCGA TERM 847 978734 - 978703 - g 74 -10 -3.78934 | opp_overlap 978699 978695 TCCCGGCGACAACAA GCAGACGCTCGCGA AGTA TCGTGCGCGTCAGC ATGATATCTATATCG Bphy_4004 977480 - 979087 + | extracellular solute-binding protein Bphy_4005 979100 - 980170 + | binding-protein-dependent transport systems inner membrane component Bphy_4006 980229 - 981143 + | binding-protein-dependent transport systems inner membrane component TERM 848 981626 - 981575 - g 70 -4.9 -4.37886 | CGATGCGCCAGAAAA TCGTCGCCGCGCTCGAAGCCGTG CATATC CGCAATCCCGAACGCGTCGCCGA TTCATATCCGCACGA Bphy_4007 981145 - 982038 + | ABC transporter related TERM 849 982617 - 982628 + G 72 -7.2 -4.2074 | overlap 982614 GTCAGCCACAATCTG GCCG TGGT CGGC TTTCTGTGTTCGCGC TERM 850 982783 - 982767 - g 75 -6.5 -4.45544 | overlap 982768 GGCTATCAACGAAAA GCCATCG AAG CGATGGG GGTCGACACGTCGCC Bphy_4008 982035 - 982802 + | ABC transporter related TERM 851 982810 - 982831 + T 90 -10.8 -4.70659 | opp_overlap 982809 982810 CGCCGTGAAACGAAT GCGCGGCC GCTCGG GGCTGCGC TTTTTCACTCTACGG Bphy_4009 984200 - 982836 - | major facilitator transporter TERM 852 983962 - 983921 - G 71 -4.3 -4.49781 | gap 1, overlap 983955 983956 AAAACACCGATAAAA CCAGCACCGCTTTGCGCCCG ATG CGATCGGCAAACGGT-CCGG CACCCAACGCGCCGA Bphy_4010 984609 - 984271 - | NIPSNAP family protein TERM 853 984306 - 984320 + g 79 -11.4 -3.83026 | TTCTGAATTCGACGC GCCGGA TGA TCCGGC TTTCCTGTGCGACGA Bphy_4011 986384 - 984621 - | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Bphy_4012 987243 - 986413 - | short-chain dehydrogenase/reductase SDR Bphy_4013 987389 - 988282 + | AraC family transcriptional regulator Bphy_4014 989466 - 988294 - | 4-hydroxybenzoate 3-monooxygenase Bphy_4015 989701 - 990057 + | transport-associated Bphy_4016 990547 - 990086 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Bphy_4017 992841 - 990535 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 854 993464 - 993432 - R 100 -15.6 -4.1021 | gap 1, opp_overlap 993432 TTGCAGAAGTACAAA CGCGGG-GTACGCCC TTTG GGGAGTACACCCGCG TTTCATTGCCCGCTT TERM 855 993432 - 993464 + r 100 -15.6 -3.90856 | gap 1, opp_overlap 993432 TTGCAGAAGTACAAA CGCGGG-GTACGCCC TTTG GGGAGTACACCCGCG TTTCATTGCCCGCTT Bphy_4018 994762 - 993485 - | virulence factor family protein TERM 856 993512 - 993526 + g 74 -5 -4.56597 | opp_overlap 993524, overlap 993505 993513 GGCCTGCTTTTTCAA TGCATT GAG AATGCG TTTTTCAAGCGCGAC TERM 857 994740 - 994720 - G 72 -8.9 -4.02108 | overlap 994715 994721 GCGAGCACAACGAAA CGCTCGCCA GTG CGGCGAGCC GGTAAAACTTTTGCA Bphy_4019 997353 - 994759 - | hypothetical protein TERM 858 997508 - 997534 + r 81 -4.3 -5.15117 | opp_overlap 997508, overlap 997510 AAATTGCACAAAAGG TTGACATCGGG AACGA CCCGAAGGCGA TTTTTTGCAGTTTTC TERM 859 997860 - 997895 + r 76 -13.4 -2.76162 | opp_overlap 997865, overlap 997859 997865 CCGCTGCCCCAATGC GAAAAGCCCCAGTC ACGTTGCC GACCGGGGCTTTTC ATTTCAACTCGCGTA TERM 860 997890 - 997865 - R 82 -10.4 -4.19238 | opp_overlap 997860 997859 997865 GCCCCAATGCGAAAA GCCCCAGTCA CGTTGC CGACCGGGGC TTTTCATTTCAACTC TERM 861 997865 - 997890 + r 76 -7.5 -4.55798 | opp_overlap 997865, overlap 997860 997859 GCCCCAATGCGAAAA GCCCCAGTC ACGTTGCC GACCGGGGC TTTTCATTTCAACTC Bphy_4020 999473 - 997917 - | EmrB/QacA family drug resistance transporter TERM 862 998751 - 998727 - G 75 -12.1 -3.4758 | overlap 998721 CAGGAAGAACACGAA GCTGATGGCCG CGA CGACCGTCAGC GTCCAGATCACCGGC Bphy_4021 1000900 - 999545 - | secretion protein HlyD family protein TERM 863 1000748 - 1000797 + g 71 -10.5 -3.5936 | gap 1, overlap 1000754 1000757 1000767 GCGCGTATTCGGTTC CGCCGCGCCCGCAG-CCGGGGCCG CCG CCGCTTCGGGCTTCGCTTGCGGCG TTTGCGGCGTTTGCG TERM 864 1000754 - 1000784 + g 71 -12.4 -3.17571 | overlap 1000748 1000757 1000767 ATTCGGTTCCGCCGC GCCCGCAGCCGGGG CCG CCGCCGCTTCGGGC TTCGCTTGCGGCGTT Bphy_4022 1002443 - 1000935 - | RND efflux system outer membrane lipoprotein TERM 865 1001456 - 1001425 - G 71 -10.1 -3.56366 | opp_overlap 1001425 1001425 1001433, overlap 1001415 AAGAATCGGCCGAAA CCGAACGCGTCGA GTCCGA TCGCCGCGCTCAG GTTGATGTCGGGATA TERM 866 1002492 - 1002476 - R 89 -3.7 -5.63504 | overlap 1002478 AATCGGATAAAAAAA TGCTCAA TCG TTGAGGA ACTTGCGAAGCAGAC Bphy_4023 1002916 - 1002479 - | MarR family transcriptional regulator TERM 867 1003087 - 1003071 - R 75 -5.7 -4.70169 | opp_overlap 1003080 GGAGAGGCAAGAAAA GCGGCCG TTT CAGTCGC TGATGAATTTGCGCA Bphy_4024 1003517 - 1003080 - | MarR family transcriptional regulator Bphy_4025 1005203 - 1003605 - | NifA subfamily transcriptional regulator TERM 868 1004074 - 1004038 - G 86 -3.6 -5.14563 | gap 2, overlap 1004039 1004040 TCTTCGAGGAAAAAA CCCGCCAGCAGCAGCACG TCG CG-GCCGC-GCTCGCGCA ACGGCGGTACACGTA TERM 869 1004991 - 1004962 - G 71 -7.7 -4.13767 | gap 1 TCGCTCACGCGAAAA CGG-CGGCCGAGCG TAT CGCCCGTCAGGCCG TCGATCGCGAGCGGC TERM 870 1005097 - 1005059 - G 100 -10.9 -4.72986 | gap 1 CATCGCCAGGAAAAA GCGTGCGC-AGCGTCGTC AGAA GACGGCGATAGCGCTCGC GCTCCGGCAGGTCGC Bphy_4026 1005335 - 1006516 + | oxidoreductase FAD-binding subunit TERM 871 1006580 - 1006606 + T 100 -9.5 -5.37043 | ACCCGGTAGTACTTT GGAAGAGACGA TGTTC TGGTCTCTTCC TTTTTTATCTGGGCT Bphy_4027 1006928 - 1006638 - | muconolactone delta-isomerase TERM 872 1007025 - 1006991 - R 75 -10 -3.64703 | gap 1, overlap 1006996 CTCGCGCGACTCAAA CCGAA-GCGGCCGCC TGAAGC GGCGGCCGCATTCAC ACCACTATGCGTTCT TERM 873 1007019 - 1006996 - R 90 -16.7 -3.29324 | overlap 1006991 GCGACTCAAACCGAA GCGGCCGCC TGAAGC GGCGGCCGC ATTCACACCACTATG Bphy_4028 1007960 - 1007058 - | catechol 1,2-dioxygenase Bphy_4029 1009197 - 1008040 - | muconate and chloromuconate cycloisomerase Bphy_4030 1009288 - 1010178 + | LysR family transcriptional regulator Bphy_4031 1010644 - 1011084 + | hypothetical protein TERM 874 1011166 - 1011127 - T 74 -7.7 -4.19371 | opp_overlap 1011158, overlap 1011128 1011150 TAAAGCCTGAACAAA TCTTAAGCGCCATGGGC GGCAAA GCCCTTGGCGCGTTAGC CAACGATGCTGCGCG Bphy_4032 1012390 - 1011464 - | LysR family transcriptional regulator TERM 875 1012319 - 1012353 + g 72 -11.5 -3.53012 | opp_overlap 1012339 CGATACCGTGCTCTT TCG-CGCAGCCGCGGAG AAA CTCC-CGGCTTCGGCGA TTTCGACAAACAGCC Bphy_4033 1014127 - 1012634 - | permease for cytosine/purines uracil thiamine allantoin Bphy_4034 1014564 - 1014812 + | hypothetical protein Bphy_4035 1015773 - 1014823 - | hypothetical protein Bphy_4036 1017231 - 1015843 - | lysine/ornithine N-monooxygenase TERM 876 1017131 - 1017109 - G 80 -14.9 -3.14132 | CTGCCGTTCGATGAA GCAGTGCGC GGCCG GCGCACTGC CGCTCTCCGCGAGGC Bphy_4037 1018321 - 1017296 - | hypothetical protein Bphy_4038 1023290 - 1018311 - | amino acid adenylation domain-containing protein TERM 877 1019076 - 1019036 - G 71 -14 -2.71364 | gap 2, opp_overlap 1019028 GCACGGCGGCAATCA CGT-CGCGCGGCGAGGC-CG ATT CGCGCATCGCCGTGCGCACG ACGACTGCATTGATG Bphy_4039 1032976 - 1023302 - | amino acid adenylation domain-containing protein TERM 878 1026365 - 1026346 - G 85 -12.2 -4.07687 | AGCTGGTGCGCAAAA TGTCGTGC TGCG GCACGACA TGATCGAACGCGGCC TERM 879 1026589 - 1026608 + g 72 -12.8 -3.06831 | overlap 1026604 GCGGGAAGTCGGCGG GCGTGGCG CTGG CGCCGCGC TTCGATACGCGTTCG TERM 880 1027937 - 1027953 + g 71 -9.3 -3.75418 | opp_overlap 1027896 1027892, overlap 1027936 CGCATTGTCCGCAGG CGCGAGC GCT GCACGCG TTTCCGCTTTCTGTC TERM 881 1028231 - 1028248 + g 78 -12.7 -3.54543 | CTGCACGACAGGTTG CTGCGCG AGTT CGCGCAG TTTCGCGCGGTCGAT TERM 882 1029026 - 1029079 + g 72 -11.6 -3.53224 | overlap 1029029 GATCTTCAGCACGCC GACTGCGCGTTCGCGCATGGTCGC GGCGAA GCGGTCGGGATCGAACGCGCACTC TTTCGGCAGCAGGTG TERM 883 1030601 - 1030570 - G 93 -19.4 -3.15249 | opp_overlap 1030562 1030559 1030558 CATATTGCGCAGCAA GAGCGGGCAGCGCG GCGG CGCGCCGCTCGCTC AACGCTGCATAGGTT TERM 884 1031518 - 1031528 + g 80 -8.2 -4.4009 | GCTTCGACAAATGCT CGCG CAA CGCG TTTTCTCCAATGGCA TERM 885 1031953 - 1031934 - G 81 -13.6 -3.53012 | CGCGCTGTGCGCAAA CCGATCGG CGTA CCGATCGG CAACGACGCGCATGA TERM 886 1034642 - 1034606 - g 70 -11.5 -3.40403 | opp_overlap 1034606 1034607, overlap 1034589 1034607 1034621 CGCGCTCGATCACAA GGTGCGCGTGGAAAACG GCA CGTTCTCGACGCGCGCA TTGTCGACGGGTCAG TERM 887 1034641 - 1034607 - g 74 -15 -2.64099 | opp_overlap 1034607 1034606, overlap 1034589 1034606 1034621 GCGCTCGATCACAAG GTGCGCGTGGAAAACG GCA CGTTCTCGACGCGCGC ATTGTCGACGGGTCA TERM 888 1034607 - 1034641 + G 74 -15 -2.57564 | opp_overlap 1034589 1034606 1034607 1034621, overlap 1034606 GCGCTCGATCACAAG GTGCGCGTGGAAAACG GCA CGTTCTCGACGCGCGC ATTGTCGACGGGTCA Bphy_4040 1033185 - 1034978 + | cyclic peptide transporter TERM 889 1035041 - 1035013 - T 78 -10.9 -3.77219 | opp_overlap 1035013 ACGATGGAATGGAAA GCACCTCGGGACG ACA CCTCACGAGGCGC TTCTGATTCGAGCGA Bphy_4041 1036101 - 1035076 - | periplasmic binding protein Bphy_4042 1036892 - 1036098 - | ferric iron reductase Bphy_4043 1039021 - 1036895 - | transport system permease protein TERM 890 1037094 - 1037072 - G 77 -12.7 -3.35679 | overlap 1037041 CGCCGCGAGCCACAA GCGCACGCG ATGCG CGCGTGCAC CGAGCATGGCCGCAA TERM 891 1037378 - 1037394 + g 74 -10.1 -3.73224 | opp_overlap 1037378 CAGCCACACGACGAA GCGTGCG GGC TGCACGC TTTCCTGCACGATCA TERM 892 1037932 - 1037906 - G 77 -12.2 -3.5594 | opp_overlap 1037906, overlap 1037884 AATCCATGTGGCAAA GCGGCCGCGC GCCGATT GCGTGGCCGC TTCGCCGGCCTGCGC Bphy_4044 1039863 - 1039018 - | ABC transporter related Bphy_4045 1040891 - 1039860 - | taurine catabolism dioxygenase TauD/TfdA TERM 893 1040088 - 1040121 + g 75 -7.4 -4.27316 | gap 1, opp_overlap 1040108 ATCGGCTTCGAGCGG CGTGCCGT-CGCCGT AGTAC ACGTTGCGCGGCACG TTTTCGATTCCGACC Bphy_4046 1041263 - 1041030 - | MbtH domain-containing protein Bphy_4047 1042049 - 1041315 - | ECF subfamily RNA polymerase sigma-24 factor TERM 894 1041375 - 1041390 + g 74 -4.6 -4.58395 | overlap 1041377 AGCGCGTCCCGCCGT CTTCGC ATAC GCGACG TTTTTCGCGCCTGCG TERM 895 1041652 - 1041666 + g 79 -10 -4.08216 | AGGCCGTCTTCCTCG CACGTG TGC CACGTG TTTTCGAGGGACTGG TERM 896 1041856 - 1041832 - G 70 -11.3 -3.40371 | opp_overlap 1041831 1041832, overlap 1041833 CATCCGATGAACGAA CGCGCGAGCTG GAT CAGCGCGCGCC GGTTCTCGATCAGCA TERM 897 1041855 - 1041833 - G 74 -14.8 -2.63901 | opp_overlap 1041832 1041831, overlap 1041832 ATCCGATGAACGAAC GCGCGAGCTG GAT CAGCGCGCGC CGGTTCTCGATCAGC Bphy_4048 1043736 - 1042408 - | major facilitator transporter Bphy_4049 1044097 - 1043849 - | hypothetical protein Bphy_4050 1045850 - 1044138 - | monooxygenase FAD-binding Bphy_4051 1046853 - 1045894 - | beta-lactamase domain-containing protein Bphy_4052 1047102 - 1047947 + | IclR family transcriptional regulator Bphy_4053 1047944 - 1048753 + | IclR family transcriptional regulator TERM 898 1049061 - 1049029 - T 76 -4.6 -4.86731 | overlap 1049032 CCGCGGTAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACGCCAGC AAACCAGAAGCAAAG TERM 899 1049133 - 1049117 - T 89 -3.6 -5.52986 | overlap 1049119 1049120 ACGCCAGCAAAAAAA CAGCGA CCGCC TCGCAG ACGAAAAAAACCGGC Bphy_4054 1050012 - 1049149 - | RpiR family transcriptional regulator TERM 900 1049564 - 1049554 - G 70 -2.4 -4.60041 | ATCGAGCCTCAAAAA CCGC AAT GCCG CATCTTGTGCAACGA TERM 901 1049879 - 1049846 - G 79 -5.9 -4.62336 | gap 1, overlap 1049847 1049870 ACCGCACGGCAAAAA CGCGTCACGGACGGCT CCG AGACATCCGCG-CGCT GCGCCAGCTCGGTGA Bphy_4055 1051134 - 1050070 - | ABC transporter related TERM 902 1050708 - 1050675 - G 71 -12.3 -3.25073 | overlap 1050673 CGTCGAACAGGAACA GCGACGGCTCGCGCA CCAC CGCGCGCCCCATCGC GACGCGCTGGCGCTG TERM 903 1051050 - 1051101 + g 84 -12.5 -3.97636 | gap 3, opp_overlap 1051046 GCACGACGAACTCGC CGT--CGTCGATATGCAGGTCGATGC CGT GCA-CGACCTGCGTGTCGCCGTAACG TTTGTAGATTCCGCT Bphy_4056 1051957 - 1051184 - | short-chain dehydrogenase/reductase SDR TERM 904 1051747 - 1051769 + g 77 -13.4 -3.31144 | CGCGTGCAGCCACCG CCTGCGCGAC GCG GTCGCGCACG TTATCGGCGTCGGCC Bphy_4057 1052256 - 1053488 + | extracellular solute-binding protein TERM 905 1053526 - 1053552 + F 73 -10.9 -3.38072 | overlap 1053522 GGCGCAGCACCGGAA GCCGCATCG ATTCGACGC CGATGCGGC TTCATATTCGATAGA Bphy_4058 1053661 - 1054590 + | binding-protein-dependent transport systems inner membrane component Bphy_4059 1054587 - 1055432 + | binding-protein-dependent transport systems inner membrane component TERM 906 1055456 - 1055477 + F 75 -12.3 -3.28416 | gap 1, opp_overlap 1055456 1055458, overlap 1055458 TGTCTGTCATTCAAA GA-CCGCCGG TAA CCGGCGGCTC TTCGTCTGCCTCGTC TERM 907 1055477 - 1055456 - f 81 -12.3 -3.64703 | gap 1, opp_overlap 1055456 1055458, overlap 1055458 TGTCTGTCATTCAAA GA-CCGCCGG TAA CCGGCGGCTC TTCGTCTGCCTCGTC TERM 908 1055474 - 1055458 - f 87 -15.1 -3.40597 | opp_overlap 1055458 1055456, overlap 1055456 TCTGTCATTCAAAGA CCGCCGG TAA CCGGCGG CTCTTCGTCTGCCTC TERM 909 1055458 - 1055474 + F 81 -15.1 -2.52023 | opp_overlap 1055456 1055458, overlap 1055456 TCTGTCATTCAAAGA CCGCCGG TAA CCGGCGG CTCTTCGTCTGCCTC TERM 910 1055611 - 1055631 + F 74 -7.6 -4.12456 | opp_overlap 1055611 1055612, overlap 1055612 CGAAATTGCCGGAAA TTGGCCAT TTAAT ATGGCCAG TTTTGCGCCTAATCT TERM 911 1055891 - 1055929 + G 71 -10.8 -3.61398 | opp_overlap 1055890 1055887 1055886 1055925 GGCGGCGAAACGGAG CGGCGTCTCGCGACGGTC GTC GTATGGCGCGAAACGCCG TTCTTCACGGCACGC Bphy_4060 1055693 - 1056130 + | alkylhydroperoxidase TERM 912 1056203 - 1056233 + F 75 -8.4 -4.05788 | gap 2, overlap 1056203 1056207 GAGTCGTACGCATAT G-GC-CTGCAAGCG TATGC CGCTTGCAGTGCGC TTTCATTTCCGGCCA Bphy_4061 1056316 - 1057026 + | carboxymethylenebutenolidase Bphy_4062 1057851 - 1057255 - | 17 kDa surface antigen Bphy_4063 1058701 - 1057886 - | methyltransferase type 11 TERM 913 1058054 - 1058083 + g 74 -11.3 -3.5882 | gap 1, opp_overlap 1058045, overlap 1058079 GCAGAACGCCAACGC CGCGACCGCTGCCG ATT CGGC-GCAGCCGCG TTTCGCGATCGTCTC Bphy_4064 1060151 - 1058820 - | integral membrane sensor signal transduction histidine kinase Bphy_4065 1061310 - 1060411 - | LysR family transcriptional regulator TERM 914 1061036 - 1060984 - G 74 -10.6 -3.80014 | gap 2, opp_overlap 1060984, overlap 1060985 ACATTCAGCATGAAA CCGG-GCCAACGCATCGG-GCAGC CATGAAC GCTGCACCGACGCGATCGCACCGA TATTCACGCGCACGT Bphy_4066 1061425 - 1061862 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_4067 1065048 - 1061947 - | chromosome segregation ATPase-like protein TERM 915 1062383 - 1062415 + g 72 -11.1 -3.53012 | overlap 1062372 1062405 CTTTGCGCGAGTTCG GCTGCGCGCTGTTCC GCA GCATCGGCGCGCTGC TTTGCGGCGAACGCG TERM 916 1065355 - 1065339 - g 91 -15.1 -3.85698 | CGGCTTGTTGATAAA GCGCCGG CAT CCGGCGC ACGAAGTGATCGTCG TERM 917 1067317 - 1067304 - g 78 -3.7 -4.80178 | CAGCAAGGAAGAAAA GCCCG TGTT CGGCC GCATGTTCCAGACGC TERM 918 1067637 - 1067601 - g 81 -11.7 -4.08216 | gap 3, overlap 1067576 GCAGGCCGCCGAAAA CGCGCGCCTGTCGC-CGT TCGA ACGCGCG-CA-GCGCGCG GAGGGGACCGTTTGA Bphy_4068 1065280 - 1067652 + | NADH:flavin oxidoreductase/NADH oxidase Bphy_4069 1067652 - 1068431 + | short-chain dehydrogenase/reductase SDR TERM 919 1068468 - 1068452 - g 79 -2.1 -5.04249 | overlap 1068453 1068454 GCTGCAAAAAAGAAA CCTGCCG ATT CAGCCGA AACCAAACCGGCGCG Bphy_4070 1068428 - 1068985 + | MarR family transcriptional regulator TERM 920 1069380 - 1069418 + G 73 -12.3 -3.31263 | gap 1, opp_overlap 1069352 GTCCGCAGCCGATCA TCGCTGCCGTCGACGGCG TATG CGCCGGCGCGGGC-GCGA TTCTCGCGATGGCGT Bphy_4071 1069013 - 1069864 + | enoyl-CoA hydratase/isomerase TERM 921 1070479 - 1070533 + G 72 -11.6 -3.55444 | gap 3 CCGATACGCCGGGCC TGCAGATCGCG-GAGCGCAT-CGACGT GATC GCGCCGCATCCGCTCGCGCG-TCTGCA TTTCGACAGTGCGCG Bphy_4072 1069866 - 1071071 + | acyl-CoA dehydrogenase domain-containing protein Bphy_4073 1071068 - 1071511 + | thioesterase superfamily protein Bphy_4074 1071508 - 1071906 + | endoribonuclease L-PSP Bphy_4075 1071970 - 1073607 + | AMP-dependent synthetase and ligase Bphy_4076 1074033 - 1075346 + | major facilitator transporter Bphy_4077 1075459 - 1075995 + | transcription activator effector binding TERM 922 1076041 - 1075992 - T 72 -4.8 -4.58395 | gap 1, opp_overlap 1076034, overlap 1075997 GCTACCGCTCAAAAA CTGAACCGCGCAGCGG-GCAGGC GTTCA GCCTGTTCCGCCGATGGGTGCAG CTTCGACTTCGAACG Bphy_4078 1076630 - 1076016 - | flavin reductase domain-containing protein TERM 923 1076738 - 1076714 - R 100 -15 -5.00616 | gap 1, overlap 1076699 1076716 CGCGCGCGTAAAAAA GCG-GCGGCGC TTTT GCGCCGCCCGC GGATCCGCATGAGTG TERM 924 1076735 - 1076716 - R 86 -16.4 -2.75708 | overlap 1076714 1076699 CGCGCGTAAAAAAGC GGCGGCGC TTTT GCGCCGCC CGCGGATCCGCATGA Bphy_4079 1077095 - 1076763 - | hypothetical protein Bphy_4080 1078561 - 1077347 - | hypothetical protein TERM 925 1077975 - 1078031 + g 88 -9.4 -4.66833 | gap 2, opp_overlap 1077962, overlap 1077962 AACGCGACGATCCTG GCGCGCGCTTCGTCAGTGATGGGCAAGG CCT TCTTGC-CGTCGACG-CGCAGCGTGCGC TTTTTCCCCTTCAGC TERM 926 1079417 - 1079435 + G 72 -11.6 -3.55761 | opp_overlap 1079415 CGTCGATAGCGAATG GCCGGCGC TGC GCGCGGGC TTTGCAGAATGGCTG Bphy_4081 1078806 - 1079525 + | GCN5-related N-acetyltransferase Bphy_4082 1080434 - 1079910 - | GCN5-related N-acetyltransferase Bphy_4083 1081010 - 1080534 - | 3-demethylubiquinone-9 3-methyltransferase TERM 927 1081052 - 1081082 + r 87 -4 -5.44638 | gap 2, overlap 1081056 AGCGGGCGCATGGAC TGCACGACGGGCAG CAGCC CCGCCCGT-G-GCA TTTTGTTTTTGTTAT Bphy_4084 1081579 - 1081094 - | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_4085 1081964 - 1081731 - | hypothetical protein TERM 928 1081932 - 1081910 - G 74 -11.3 -3.57144 | gap 1, opp_overlap 1081908 GCGTCGATGCGCAAA GCGCG-GCTG CCAG CAGCGCGCGC AACTTCATAGCTTTC Bphy_4086 1083191 - 1082025 - | hypothetical protein Bphy_4087 1084696 - 1083194 - | hypothetical protein TERM 929 1083828 - 1083883 + g 70 -11.7 -3.33261 | gap 1, opp_overlap 1083860 ATGATGGTCCGCGTG CCCGGC-TCGTGCAGTTGCGCGCG GAAGACGAA CGCGCCCGGCGGCGCGTTGCCGGG TTGTGGCCCTTGCGC TERM 930 1083875 - 1083860 - G 73 -11.8 -3.36273 | opp_overlap 1083828 CGCGCGGAAGACGAA CGCGCC CGGC GGCGCG TTGCCGGGTTGTGGC TERM 931 1084203 - 1084216 + g 73 -9.5 -3.85698 | opp_overlap 1084194 AACGCACCGGCGTAT GGCGC GACG GCGCC TTTATCGACCGACAC TERM 932 1084430 - 1084444 + g 81 -11.4 -4.08767 | GCTGCTCGGGCTCGC GCCGCT TGC AGCGGC TTTTGCAGCACTCGC Bphy_4088 1085338 - 1084811 - | putative membrane-associated protein TERM 933 1085230 - 1085198 - G 70 -11.2 -3.36823 | gap 1, overlap 1085193 CGCGGCAAAACGCAA CGCACG-CGGCTGCG CGGC CGCAGTCGTCGGGCG GCCGTGCCCGGCGAA Bphy_4089 1085787 - 1085335 - | hypothetical protein Bphy_4090 1086398 - 1085784 - | ECF subfamily RNA polymerase sigma-24 factor TERM 934 1085957 - 1086008 + g 73 -12.1 -3.37354 | gap 1 GCGCCTCGCGCTGGC GCGCGGGCAGCGCGGCAAGCGCGT CCCGC ACACGCGCGTCGCGC-GACTGCGC TTCTAGCTGCATGTC Bphy_4091 1086835 - 1087263 + | hypothetical protein Bphy_4092 1087267 - 1088070 + | AraC family transcriptional regulator Bphy_4093 1088199 - 1088492 + | hypothetical protein TERM 935 1088498 - 1088540 + T 93 -17.7 -3.19463 | opp_overlap 1088493 1088494, overlap 1088493 CGCGGAATAAGCGCG CCTGGTCGCGCTTTGCTGC CCATC GCAGCAAGGCGCGTCCGCG TTCGTGCCTAATAGC Bphy_4094 1089285 - 1088548 - | hypothetical protein TERM 936 1089087 - 1089063 - G 71 -7.8 -4.13767 | gap 1 GCGGCCATTTCAAAA GCTTGCG-CGC TTCG GCGTCGCACGC ACGATATCCCGTCGA Bphy_4095 1089414 - 1090370 + | alcohol dehydrogenase Bphy_4096 1090402 - 1090578 + | hypothetical protein TERM 937 1090582 - 1090633 + T 78 -11.5 -3.66178 | opp_overlap 1090631 GTGACGAGCTGACGT TACTGCATGCGTGCGTGCGCG CCGCTCATTT CGCGCGCGCGCTCAAGCAGCA TTTCGCGTTCCCGCG Bphy_4097 1091885 - 1090581 - | RNA polymerase ECF-subfamily sigma factor TERM 938 1091578 - 1091521 - G 100 -22.7 -2.79302 | overlap 1091507 1091510 ACGAGCCGCAGCAGA TCGTCGCCGATGTCGTCGGCGCGCGCG GCGT CGAGCGCGTCGACGAAATCGGGCACGA TATGGGCCTCGCGTG Bphy_4098 1092304 - 1091885 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 939 1092087 - 1092119 + g 74 -2.5 -4.72986 | overlap 1092085 1092089 1092090 GAGAGGCAGATCAGC GCTTCTGTGCTCTCC TTC GGATTGCACAGCGTC TTTTTCGTGAAGGTC Bphy_4099 1092767 - 1092354 - | DGPFAETKE family protein Bphy_4100 1093240 - 1092884 - | DGPFAETKE family protein Bphy_4101 1094056 - 1095174 + | porin TERM 940 1095252 - 1095295 + T 100 -18.2 -3.14564 | overlap 1095246 1095256 CGGGCCCGCGAGGCG ACCACGACGCCCCTACGTTC TTCA GAACGTAGGGGCGTCGTCCA TTGATAACGCCGTAG TERM 941 1095256 - 1095291 + T 100 -27.8 -2.56596 | overlap 1095246 1095252 CCCGCGAGGCGACCA CGACGCCCCTACGTTC TTCA GAACGTAGGGGCGTCG TCCATTGATAACGCC Bphy_4102 1095795 - 1095331 - | activator of Hsp90 ATPase 1 family protein TERM 942 1095672 - 1095648 - G 70 -14.3 -2.60194 | overlap 1095647 ATTCGTGGAAGGAAT TGGTGAAGCCC TTG GGGCCCCACCA GTGCGCGAGATGCGC TERM 943 1095967 - 1095951 - R 79 -13.7 -3.08015 | overlap 1095940 TCAATCACGGCAAGA CGCAGCG CAA CGCTGCG TCAAGCGTCAGATGG Bphy_4103 1097099 - 1095975 - | Rieske (2Fe-2S) domain-containing protein TERM 944 1096938 - 1096971 + g 76 -13.9 -3.17075 | gap 1, opp_overlap 1096947 1096948 CAGCACGATCGGCTC GC-CGGCAAAGCGCAC GGC GTGCGTCTTGCCGCGC TTCACTTCGCGCGAC TERM 945 1097311 - 1097282 - R 95 -13.5 -4.21194 | opp_overlap 1097286, overlap 1097286 CCGTATCAGGCAAAA CGAAGGGCGGCGC CGAA GCGCCGCCCTTAT GTTCGGTGCGACGGC TERM 946 1097307 - 1097286 - R 100 -18.7 -3.70007 | opp_overlap 1097286, overlap 1097282 ATCAGGCAAAACGAA GGGCGGCGC CGAA GCGCCGCCC TTATGTTCGGTGCGA TERM 947 1097286 - 1097307 + r 100 -18.7 -3.68988 | opp_overlap 1097286 1097282 ATCAGGCAAAACGAA GGGCGGCGC CGAA GCGCCGCCC TTATGTTCGGTGCGA Bphy_4104 1098907 - 1097369 - | glycosyl transferase family protein TERM 948 1099292 - 1099241 - H 80 -9.3 -4.21194 | gap 2, overlap 1099242 1099285 TCCCACGACGGAAAA CTCGCGCG-GCAACGGCG-GCGGCC GGTG GGACGCGCGCCACAGCACGCGCAAC AGCGCGAGGCCGAGC TERM 949 1099291 - 1099242 - H 76 -12.8 -3.12395 | gap 2, overlap 1099241 1099285 CCCACGACGGAAAAC TCGCGCG-GCAACGGCG-GCGGCC GGTG GGACGCGCGCCACAGCACGCGCAA CAGCGCGAGGCCGAG TERM 950 1099647 - 1099633 - g 71 -9.2 -3.71284 | opp_overlap 1099633 1099632 GTCTTATCAACAGAA CGACCG ACC CGGCCG CTTTATTCCTTCAAT Bphy_4106 1099587 - 1099874 + | hypothetical protein Bphy_4107 1100008 - 1100988 + | glutathione S-transferase domain-containing protein Bphy_4108 1101075 - 1101359 + | hypothetical protein Bphy_4109 1101692 - 1101369 - | thioredoxin domain-containing protein Bphy_4110 1102905 - 1101781 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 951 1102271 - 1102223 - G 74 -10.2 -3.73775 | gap 2, opp_overlap 1102230 1102264 GTCATGCCCATGAAA GCGTG--GCTCGCCGCTGCCGCGA CGA TTGCGTCGGCGGCGATCTGCACGC CTCCGTCCGTGCCGT TERM 952 1102698 - 1102674 - G 71 -12.2 -3.2218 | gap 1, opp_overlap 1102673 1102674, overlap 1102677 TCGAACACGGACCAA CGACGACGACC AGCC GGTCGTCG-CG ATCGTGCAGGATGTC TERM 953 1102696 - 1102677 - G 73 -13.6 -2.79842 | opp_overlap 1102674 1102673, overlap 1102674 AACACGGACCAACGA CGACGACC AGCC GGTCGTCG CGATCGTGCAGGATG Bphy_4111 1103556 - 1103020 - | activator of Hsp90 ATPase 1 family protein TERM 954 1103486 - 1103465 - G 76 -5.7 -4.46926 | opp_overlap 1103440 GATTCGATCAGAAAA GCCCACACG CGCT CGATTGGGC CGGGCAGCAGACGTT Bphy_4112 1105040 - 1103553 - | transcriptional regulator TERM 955 1104712 - 1104757 + g 72 -8.2 -3.97368 | gap 2, opp_overlap 1104672 1104673, overlap 1104708 CGGTCGTGCGGCAAG CCGGCGACGCGCCGC--GACAG GCGG CTGACGGGCGGAGCGTTGGCGG TTTGTGCATTCGCCG Bphy_4113 1105143 - 1105619 + | GCN5-related N-acetyltransferase Bphy_4114 1106197 - 1105616 - | hypothetical protein Bphy_4115 1107560 - 1106223 - | Fe-S oxidoreductase-like protein TERM 956 1107760 - 1107737 - R 77 -13.8 -2.88544 | opp_overlap 1107755 CGGTACCGCGACAGA TGCGCCGGCT GCCC AGCCGGCGCC TGGACTCAATCGACC Bphy_4116 1108188 - 1107766 - | rubrerythrin Bphy_4117 1108416 - 1108775 + | hypothetical protein TERM 957 1108909 - 1108881 - f 81 -8.9 -4.36914 | gap 1, opp_overlap 1108880 1108881 CGCTCCTGCATAAAA CGCCATGCGCGC TGCAAT GCG-GCATGACG CTTTTCCAAACCGTC Bphy_4118 1109015 - 1109764 + | DNA/RNA non-specific endonuclease Bphy_4119 1109757 - 1110014 + | hypothetical protein TERM 958 1111045 - 1111003 - g 71 -9.3 -3.76952 | gap 3, opp_overlap 1110997 1111020 GCGATCGAAGCGAAA GCCGGGCCGACGC-ATGTCG ATGCCG CG-CATCGCGTCA-CCCGGC ATCGCTTCTGAATTC Bphy_4121 1110511 - 1111056 + | hypothetical protein Bphy_4122 1111949 - 1111059 - | transporter DMT superfamily protein Bphy_4123 1112329 - 1111946 - | hypothetical protein TERM 959 1113011 - 1113001 - g 70 -2.4 -4.60041 | opp_overlap 1112979 ACCGACCTCGAAAAA CCGG TGC CCGT GCTGATCTCCGCGTA Bphy_4124 1112398 - 1113378 + | hypothetical protein Bphy_4125 1113770 - 1113474 - | acylphosphatase Bphy_4126 1113958 - 1114968 + | hopanoid-associated sugar epimerase Bphy_4127 1115086 - 1115634 + | hypothetical protein Bphy_4128 1116358 - 1115687 - | lytic transglycosylase catalytic TERM 960 1116113 - 1116124 + g 78 -3.6 -4.8622 | CCCCGTCGCGCCGTT GCCG CCCT TGGC TTTTTCCTTGAAGCG Bphy_4129 1117533 - 1116355 - | hopene-associated glycosyltransferase HpnB TERM 961 1118199 - 1118162 - g 100 -14.9 -4.57341 | gap 1, overlap 1118163 1118192 AATCTTCGCCAAAAA GGCGCGCGCTTCGTCGAG GAG CTCGACGAAGTGC-CGCA GGGCGCAGTTGCCAT TERM 962 1118198 - 1118163 - g 93 -18.4 -3.33922 | gap 1, overlap 1118162 1118192 ATCTTCGCCAAAAAG GCGCGCGCTTCGTCGAG GAG CTCGACGAAGTGC-CGC AGGGCGCAGTTGCCA Bphy_4130 1118006 - 1118950 + | hydroxymethylbutenyl pyrophosphate reductase Bphy_4131 1118973 - 1120118 + | hopanoid biosynthesis associated radical SAM protein HpnH TERM 963 1120136 - 1120174 + T 100 -19.8 -4.08692 | opp_overlap 1120142, overlap 1120142 GGCATCGACGCCGCA TGAAAAGAGCGCAACGGT TTA GCCGTTGCGCTCTTTTTG TTTTGGCGCCGCTTG TERM 964 1120168 - 1120142 - T 100 -18.1 -4.2558 | opp_overlap 1120142 1120136 GACGCCGCATGAAAA GAGCGCAACGG TTTAG CCGTTGCGCTC TTTTTGTTTTGGCGC TERM 965 1120142 - 1120168 + T 100 -18.8 -5.45802 | opp_overlap 1120142, overlap 1120136 GACGCCGCATGAAAA GAGCGCAACGGT TTA GCCGTTGCGCTC TTTTTGTTTTGGCGC TERM 966 1120233 - 1120196 - T 72 -4.7 -4.56597 | gap 1, opp_overlap 1120222, overlap 1120214 1120216 1120219 CGCCGCTTGCAAAAA GCG-GCAACACGCGTAGA AGA TCAGCCCGCGCTGCGCGC GTTGTGCTCGGTCAG Bphy_4132 1120821 - 1120216 - | toluene tolerance family protein TERM 967 1120791 - 1120769 - G 86 -14.8 -3.53012 | overlap 1120785 GCGGTTTGTGCGAAA GCCGCGGTGG AAA CCACGGCGGC TGCCAGAAAAGCAGA TERM 968 1120879 - 1120849 - H 76 -12.5 -3.10343 | ACAGTTAGGAGTGAA GCCGCGCGGGACA AGCCA CATCCCGCGCGGT TACGGGGTCAGTATA TERM 969 1120917 - 1120955 + H 83 -13.8 -3.34962 | opp_overlap 1120908 1120909, overlap 1120922 TGGAAAGCTGCACTG GTTCACCGACGCGACCGT GCG ACGGCTGCGTCGGTATAC TTGTGCCCTCTACCA TERM 970 1120922 - 1120950 + H 88 -16.7 -2.9675 | opp_overlap 1120908 1120909, overlap 1120917 AGCTGCACTGGTTCA CCGACGCGACCGT GCG ACGGCTGCGTCGG TATACTTGTGCCCTC TERM 971 1121650 - 1121637 - g 71 -3.7 -4.58663 | opp_overlap 1121637 1121638, overlap 1121626 1121638 AGGACGCGGCAAAAA TGCCC GCGA GGGCG TTCATCGTCGTGCAA TERM 972 1122292 - 1122316 + G 86 -14.3 -3.78329 | CAAGGTCTTCAATCC GCCCGGCGA AGCGGAG TCGCCGGGC TTTACGTTCCTCGCG Bphy_4133 1121006 - 1123618 + | hopanoid biosynthesis associated RND transporter like protein HpnN TERM 973 1124361 - 1124344 - g 73 -14.1 -2.82635 | ACGGCGACGACGATA CGGGCGC GGAA GCGCCCG CGGGCGCGTCGGGCA TERM 974 1124564 - 1124522 - g 75 -14.8 -2.71263 | overlap 1124526 AAGCCTGCCGAACTA CGAAGATCCGGGCGAAGGCG CGG CGCCGTCGCCTGCATCTCCA GGTGCACCGGCAACG TERM 975 1124560 - 1124526 - g 78 -14.2 -3.27298 | overlap 1124522 CTGCCGAACTACGAA GATCCGGGCGAAGGCG CGG CGCCGTCGCCTGCATC TCCAGGTGCACCGGC Bphy_4134 1123629 - 1124639 + | VacJ family lipoprotein TERM 976 1124675 - 1124711 + T 100 -25.2 -4.7254 | opp_overlap 1124675 AAGCGCAAATAAAAA GCCCCGGCTGGTCTCG CGTCT CGCGACCAGCCGGGGC TTTTTCATGCAGCCT TERM 977 1124711 - 1124675 - T 100 -25.2 -5.29846 | opp_overlap 1124675 AAGCGCAAATAAAAA GCCCCGGCTGGTCTCG CGTCT CGCGACCAGCCGGGGC TTTTTCATGCAGCCT Bphy_4135 1125231 - 1124749 - | thioesterase superfamily protein Bphy_4136 1126082 - 1125369 - | hypothetical protein Bphy_4137 1128115 - 1126082 - | squalene-hopene cyclase TERM 978 1127020 - 1127071 + g 73 -13.6 -2.87132 | gap 1, overlap 1127029 GGCCGCGTTCGGCGG CTTCTT-CGGCGCGCGCGTCGCCCG TTT CGAGCAGCGCGTGCGCCGCAAGGGA TGTGTCCCACACGGG TERM 979 1127108 - 1127134 + g 77 -5 -4.66609 | opp_overlap 1127108, overlap 1127110 ACACGGCTGGCAATA CGCCTCGTCTTC GTG GACGACGAGCAG TTTTTCGATCGACTC Bphy_4138 1129389 - 1128112 - | squalene-associated FAD-dependent desaturase TERM 980 1128269 - 1128308 + g 70 -14.2 -2.53911 | opp_overlap 1128290 1128291 GGGCGGCGCATCTCC TCGTCGGGCTGCGCGGCG AAAG TGGCGCGCGGCTCGACAA TCAATTGCCACTTGA Bphy_4139 1130261 - 1129389 - | squalene synthase HpnD TERM 981 1130179 - 1130169 - G 74 -4.6 -4.53303 | CATCGCGAGATAAAA CGAG CTG CCCG AACTTGCGGCGGCTG Bphy_4140 1130786 - 1131208 + | hypothetical protein TERM 982 1131263 - 1131205 - T 72 -9.5 -3.75024 | gap 1, opp_overlap 1131219, overlap 1131208 1131210 GTGGATGACGAAGAA GTAGATCCCGGGCGCTGGACGCATTGCC GTAC GGCAACGCGTCCAATGTCCTGAGCCT-C AGATGAACGCAACCG TERM 983 1131261 - 1131208 - T 71 -12.3 -2.96963 | opp_overlap 1131219, overlap 1131205 1131210 GATGACGAAGAAGTA GATCCCGGGCGCTGGACGCATTGCC GTAC GGCAACGCGTCCAATGTCCTGAGCC TCAGATGAACGCAAC TERM 984 1131219 - 1131250 + T 73 -13 -2.79183 | opp_overlap 1131210 1131208 1131205 AGTAGATCCCGGGCG CTGGACGCATTGCC GTAC GGCAACGCGTCCAA TGTCCTGAGCCTCAG TERM 985 1131288 - 1131271 - T 71 -11.3 -3.26471 | TGAGCCTCAGATGAA CGCAACC GACC GGTTGCG CCCTTGCCGCTTCGC Bphy_4141 1132200 - 1131262 - | diguanylate cyclase with PAS/PAC sensor Bphy_4142 1132820 - 1132197 - | CheC, inhibitor of MCP methylation Bphy_4143 1133181 - 1132813 - | response regulator receiver protein TERM 986 1133757 - 1133796 + H 100 -9.8 -5.53288 | opp_overlap 1133761, overlap 1133761 GCAAAGTCGTATGAC TAAAGCGCCGAGCCCGCG CAGT TGCGGACGCGGCGCTTCC TTTTTTTGCATTGCG TERM 987 1133761 - 1133792 + H 100 -15 -4.04789 | opp_overlap 1133761, overlap 1133757 AGTCGTATGACTAAA GCGCCGAGCCCGCG CAGT TGCGGACGCGGCGC TTCCTTTTTTTGCAT TERM 988 1133792 - 1133761 - H 100 -16.5 -3.78953 | opp_overlap 1133761 1133757 AGTCGTATGACTAAA GCGCCGAGCCCGC GCAGTT GCGGACGCGGCGC TTCCTTTTTTTGCAT Bphy_4144 1133886 - 1136168 + | integral membrane sensor hybrid histidine kinase TERM 989 1137139 - 1137096 - g 83 -15.2 -3.28712 | gap 1, overlap 1137061 GCCGGCGGGCGACAA GCGCGGCGGACGCGCCTGCCG CTG CGGCAATCGCGTCAGC-GGGC ATCGCGGGTTCAGGC Bphy_4145 1136384 - 1137493 + | hypothetical protein TERM 990 1137508 - 1137531 + T 84 -13.1 -3.7108 | GCTTCGGCTGGCGAG GCGGCGCCT GACATG GGGCGCCGC TTTGGGTATCGACCT Bphy_4146 1138104 - 1137553 - | NADPH-dependent FMN reductase Bphy_4147 1138282 - 1138662 + | hypothetical protein TERM 991 1138676 - 1138704 + T 95 -19 -2.62983 | opp_overlap 1138682, overlap 1138674 1138678 1138682 GAGCATGCGGTCTGC GACAAAGGGCGC TTGAT GCGCCCTTTGTC TCGTCTAGCGGTCGG TERM 992 1138678 - 1138702 + T 86 -15.8 -2.85668 | opp_overlap 1138682, overlap 1138674 1138676 1138682 GCATGCGGTCTGCGA CAAAGGGCGC TTGAT GCGCCCTTTG TCTCGTCTAGCGGTC TERM 993 1138698 - 1138682 - T 77 -10.8 -3.85698 | opp_overlap 1138674 1138682 1138678 1138676 GCGGTCTGCGACAAA GGGCGC TTGAT GCGCCC TTTGTCTCGTCTAGC TERM 994 1138682 - 1138698 + T 82 -10.8 -4.11404 | opp_overlap 1138682, overlap 1138674 1138678 1138676 GCGGTCTGCGACAAA GGGCGC TTGAT GCGCCC TTTGTCTCGTCTAGC Bphy_4148 1138999 - 1138709 - | hypothetical protein TERM 995 1140119 - 1140104 - g 70 -4.6 -4.4261 | overlap 1140098 GGCTGAACAGCAAAA GATCGC CGAT GCGTTC ACTGAGCTTCGCATC Bphy_4149 1139220 - 1140185 + | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 996 1140201 - 1140233 + T 76 -12 -3.42257 | gap 1, overlap 1140194 1140202 GCGCCCGTTTGATAG TGCGCGCG-TGACGG TTAC CCGTTGTCGCGCGCG TTGCTCTATTTCGCC TERM 997 1140202 - 1140232 + T 74 -13.3 -2.64872 | gap 1, overlap 1140201 1140194 CGCCCGTTTGATAGT GCGCGCG-TGACGG TTAC CCGTTGTCGCGCGC GTTGCTCTATTTCGC Bphy_4150 1140610 - 1140239 - | arsenate reductase Bphy_4151 1141207 - 1141869 + | cobyrinic acid ac-diamide synthase TERM 998 1142961 - 1142918 - g 80 -11.8 -3.78351 | gap 1 AGAAACGCGATGAAA TTCTCAGG-CAGATCGAGCAG ATG CTGTCCGATCCGTCCTGAGGA GCAGAAAAATGGCGC Bphy_4152 1141894 - 1142958 + | parB-like partition protein TERM 999 1142994 - 1142971 - T 83 -5.8 -4.93296 | opp_overlap 1142973, overlap 1142972 1142973 TGAGGAGCAGAAAAA TGGCGCGCCA GTTG CGGCGCGCTT CATCGAAATCAGGCA TERM 1000 1142973 - 1142992 + T 73 -12.1 -3.15544 | opp_overlap 1142972 1142971 1142973 AGGAGCAGAAAAATG GCGCGCC AGTTGC GGCGCGC TTCATCGAAATCAGG TERM 1001 1142992 - 1142973 - T 73 -12.8 -2.7243 | opp_overlap 1142973, overlap 1142972 1142971 AGGAGCAGAAAAATG GCGCGCCA GTTG CGGCGCGC TTCATCGAAATCAGG Bphy_4153 1144352 - 1143003 - | putative replication protein Bphy_4154 1144673 - 1145017 + | hypothetical protein TERM 1002 1145100 - 1145083 - f 80 -2.7 -5.24551 | GCAAACGAACAAAAA GTCATGA AAAA TAATGAC TTAGCGGATAACAAC Bphy_4155 1146284 - 1147489 + | hypothetical protein Bphy_4156 1148636 - 1147572 - | integrase family protein TERM 1003 1148773 - 1148716 - R 75 -9.7 -3.87815 | gap 1, overlap 1148717 CTTTACGCGCATAAA CTCGCGCCGCTCGCCGGAACGCACGAGG CAA CCGCAGGCATTCCG-CTAGCCGCGCCAA GCACGTCCTGCACCG Bphy_4157 1149159 - 1148761 - | hypothetical protein Bphy_4158 1149856 - 1149242 - | XRE family transcriptional regulator TERM 1004 1149922 - 1149911 - H 77 -2.2 -5.03314 | TTTAGTTCGAAAAAA CGAA AATT TCCG ATTAAACCTGAGCCG Bphy_4159 1150000 - 1151199 + | 2-amino-3-ketobutyrate coenzyme A ligase Bphy_4160 1151218 - 1152246 + | L-threonine 3-dehydrogenase Bphy_4161 1152900 - 1152265 - | YceI family protein Bphy_4162 1153018 - 1153650 + | TetR family transcriptional regulator Bphy_4163 1153673 - 1154149 + | hypothetical protein Bphy_4164 1154363 - 1154890 + | hypothetical protein TERM 1005 1156028 - 1155974 - g 78 -14.4 -3.28712 | gap 2, opp_overlap 1155974 CCCGCTCGGCGACAA TACGCCG-GGCC-TGCGGCGCATC GATCTCGGT GACGCGCCGCCCGGCCGCGACGTA TGGCTTGGCTACCAT Bphy_4165 1155246 - 1156115 + | LysR family transcriptional regulator Bphy_4166 1157116 - 1156130 - | alcohol dehydrogenase TERM 1006 1157348 - 1157327 - R 76 -12.9 -3.14211 | opp_overlap 1157311 AGCTTTCGGGAGCAA GCGCAGCGC ATCG GCGCGGCGC AGCGCAAGCAGCCGC TERM 1007 1157486 - 1157458 - R 72 -6 -4.2828 | gap 2, opp_overlap 1157462 1157463, overlap 1157462 CGGGACCCAGGAAAA GTGACGCGGCCGCG TAT CGC-GCGGC-TCAC CTTTACCGGGCGCTT Bphy_4167 1159287 - 1157509 - | GAF sensor hybrid histidine kinase TERM 1008 1159651 - 1159679 + G 70 -8 -4.05747 | opp_overlap 1159643 1159668 GGCAACACGCGCGAA TGGCGCAGCTCG GAACA CGGCCGGCGCCA TTTCTGTCCGCTGTG Bphy_4168 1159465 - 1159866 + | glutathione-dependent formaldehyde-activating GFA Bphy_4169 1160136 - 1159960 - | hypothetical protein TERM 1009 1160185 - 1160160 - H 71 -10.3 -3.55444 | opp_overlap 1160178, overlap 1160161 GCCCCAGCGTGCAAA TGGCGCCGCGA CGGG TCGCGGCGACG TGCAAATCAATCGAG TERM 1010 1160184 - 1160161 - H 76 -13.8 -2.73124 | opp_overlap 1160178, overlap 1160160 CCCCAGCGTGCAAAT GGCGCCGCGA CGGG TCGCGGCGAC GTGCAAATCAATCGA Bphy_4170 1160351 - 1160656 + | hypothetical protein TERM 1011 1160746 - 1160735 - f 95 -7.2 -5.40474 | ATGTCGGCAAAAAAA GCCG GACC CGGC ATGCGCAGCACGGGA Bphy_4171 1160769 - 1161050 + | hypothetical protein Bphy_4172 1161200 - 1161940 + | short-chain dehydrogenase/reductase SDR Bphy_4173 1163492 - 1161951 - | radical SAM domain-containing protein TERM 1012 1163667 - 1163684 + r 79 -7 -4.56597 | opp_overlap 1163665 GCTTGCTGAAGGACG CCTCAC GCAAAG GTGAGG TTTTTCGGGAGACGC Bphy_4174 1165086 - 1163785 - | major facilitator transporter TERM 1013 1164825 - 1164811 - G 86 -7 -4.85267 | overlap 1164802 1164813 ACAAAGCAGCAAAAA GCCGAG CGC CGCGGC CACCAACGCCGCTAG Bphy_4175 1165319 - 1165849 + | hypothetical protein Bphy_4176 1166716 - 1165850 - | peptidase U61 LD-carboxypeptidase A Bphy_4177 1167240 - 1166713 - | ankyrin Bphy_4178 1167913 - 1167449 - | hypothetical protein Bphy_4179 1168578 - 1168051 - | GCN5-related N-acetyltransferase TERM 1014 1168179 - 1168199 + g 75 -7.6 -4.30014 | gap 1, overlap 1168155 CGTCGCCGCCCGTCA CGGTG-TCG AGGA CGAGCACCG TTTTGCCTTCGTCGC Bphy_4180 1169174 - 1168575 - | XRE family transcriptional regulator Bphy_4181 1169304 - 1171799 + | penicillin amidase TERM 1015 1171897 - 1171912 + G 75 -10.4 -3.90112 | GCAGTTCGTCAGCGA GCGCGA CTGG TCGCGC TTTCATTCGCCGAAA TERM 1016 1172028 - 1172004 - g 74 -12.9 -3.21395 | overlap 1172002 AGTCGGGCGAGAAGA GCGAGCTTGCC GAC GACAAGCTCAC CGCGATCCGTCACGA Bphy_4182 1171832 - 1172200 + | hypothetical protein TERM 1017 1172293 - 1172280 - T 100 -9.5 -6.14618 | GACAAAACAAAAAAA CCGCC CGAA GGCGG CTTGCGAAGCCCGGC Bphy_4183 1172904 - 1172326 - | YceI family protein Bphy_4184 1173522 - 1172941 - | YceI family protein Bphy_4185 1174129 - 1173560 - | cytochrome B561 Bphy_4186 1174842 - 1174300 - | CMP/dCMP deaminase zinc-binding Bphy_4187 1176002 - 1174881 - | basic membrane lipoprotein TERM 1018 1175037 - 1175054 + g 86 -9.1 -4.56597 | overlap 1175022 1175021 CGCGATGATGTCGTC GCGCTTG TCGG CGAGCGC TTTTTGCGCGGCGGG TERM 1019 1175577 - 1175595 + g 80 -12.4 -3.7941 | CGTGCGCACGTCATA GGTCGCGA AGT TCGCGGCC TTCTTGTAGCCCGTC Bphy_4188 1176941 - 1176330 - | hypothetical protein TERM 1020 1176583 - 1176557 - G 76 -13.6 -3.05343 | overlap 1176570 1176575 CGCATAGCGGCAACA GCGCGGGCAGCA ACA TGAGGCCCGCGC CGTGCATCGTCGCCA TERM 1021 1176622 - 1176575 - G 75 -14.8 -2.77523 | gap 1, overlap 1176557 1176570 CGGGCAGCAACATGA GGCCCGCGCCGTGCATCGTCGCC ATC GCCGCCGAC-CACAGCGCAAGCC CGACGAAGCCCGCCG Bphy_4189 1178343 - 1176949 - | selenium-binding protein TERM 1022 1177938 - 1177950 + g 74 -4.7 -4.58283 | GAACCGTATGCGGCC GCGTG TAG CCCGC TTTTTCCGCGACTTC TERM 1023 1178575 - 1178563 - H 77 -7.7 -4.28361 | CGAACCGGACTAAAA TGACG CAA CGTCA CCGTGTTTTTCTGCC TERM 1024 1178827 - 1178867 + G 75 -6.8 -4.44245 | TATGAGTTCGGCAAC CGGCCGCGCACGGT-ATCGG TGG CGGATCACCGCG-GCGGGCG TTTTCTGCGTGATGT Bphy_4190 1178644 - 1179462 + | LuxR family transcriptional regulator Bphy_4191 1179681 - 1181045 + | 4-hydroxyphenylacetate transporter TERM 1025 1182716 - 1182759 + G 82 -15.5 -3.14344 | gap 3 GGGCGCTGGCGCGAT GCCAGTGC-CGC-CGAT-GTCG AAG CGGCGATCGCGCGCGCACTGGC TTGATGAACGGGATC Bphy_4192 1181069 - 1182763 + | monooxygenase FAD-binding Bphy_4193 1182792 - 1182971 + | hypothetical protein Bphy_4194 1183494 - 1183018 - | MarR family transcriptional regulator TERM 1026 1183169 - 1183222 + g 72 -11 -3.4582 | gap 2, overlap 1183167 CGCTCGACGACCTCC GCGCTCTG-CGCCG-TCAGCGACACG CGCA CGCGTCGCTGATCGTCCTCAAAGCGC TCTTTCGTCACGTGA TERM 1027 1183539 - 1183512 - H 75 -5.6 -4.63928 | ATACGAGTGGAAAAA GCGATTCGCT AGCATATA AGTGAATCGC CTCCAGGGACAGCCA TERM 1028 1183731 - 1183746 + H 85 -10.4 -4.30719 | CTCGGAAGTATTTTG CCGACC GCTT GGTCGG TTTATTCTACACAAC Bphy_4195 1183790 - 1184752 + | AraC family transcriptional regulator TERM 1029 1184793 - 1184772 - T 100 -14.5 -5.69473 | GAGAGGAGAAAAAAA TCCGCGTTC GCGA GAACGCGGA TTCAAAGGCGCGCTT Bphy_4196 1185566 - 1184877 - | metal dependent phosphohydrolase TERM 1030 1185062 - 1185072 + g 70 -5.4 -4.41494 | TGCCGTTCGCGAAGG CATC GAT GATG TTTTCCTTGAAGCTC Bphy_4197 1186717 - 1185785 - | LysR family transcriptional regulator Bphy_4198 1186878 - 1187651 + | extracellular solute-binding protein TERM 1031 1188458 - 1188473 + G 70 -4.6 -4.41548 | opp_overlap 1188442, overlap 1188459 TCGCGCAACAGGATG CCGACG CGCT CGTCGA TTTTCTGACGTATCG Bphy_4199 1187689 - 1188804 + | succinylglutamate desuccinylase/aspartoacylase Bphy_4200 1189799 - 1188984 - | short-chain dehydrogenase/reductase SDR TERM 1032 1190190 - 1190239 + G 100 -20 -3.84825 | TGATCGACTTCCTGA GGCGCGCGTCGCCGGCGGC-GCGG CGCG TCGCGGCCGCCTGC-ACGGGCGCC TTTCATCTGGCTGAA Bphy_4201 1189928 - 1190866 + | AraC family transcriptional regulator Bphy_4202 1191034 - 1191171 + | hypothetical protein TERM 1033 1191224 - 1191196 - T 100 -10.1 -4.93968 | opp_overlap 1191197, overlap 1191197 AGCGACAAGCAAAAA GCGGCTCGCCAAG GCT CATGGCGGGCCGT TTTTACGTGCGGCGA TERM 1034 1191197 - 1191223 + T 100 -15.8 -4.65895 | opp_overlap 1191196 1191197 GCGACAAGCAAAAAG CGGCTCGCCAAG GCT CATGGCGGGCCG TTTTTACGTGCGGCG TERM 1035 1191223 - 1191197 - T 83 -13.6 -3.55296 | opp_overlap 1191197, overlap 1191196 GCGACAAGCAAAAAG CGGCTCGCCAAG GCT CATGGCGGGCCG TTTTTACGTGCGGCG Bphy_4203 1191877 - 1191290 - | putative lipoprotein TERM 1036 1192165 - 1192138 - R 100 -12 -5.54907 | TGCAGAAAAGAAAAA GCCGCATGCCCC CTTG AAAGCATGCGGC CGAACACTCGACAAC Bphy_4204 1193167 - 1192184 - | OmpA/MotB domain-containing protein Bphy_4205 1194060 - 1193191 - | MotA/TolQ/ExbB proton channel TERM 1037 1193485 - 1193434 - G 72 -12.9 -3.17219 | gap 1, opp_overlap 1193466 1193467 CAGAATGCCGAGGAA CGTACCGACCAGCGCGCCC-GCGA TCATC TCGCCGAGCACGGCGGGCGGTGCG CCGACCGAGCCCATT TERM 1038 1193869 - 1193891 + g 79 -6.2 -4.63218 | opp_overlap 1193872, overlap 1193870 GGCACCGCCCTTGAA GCATCCAGGC AAA GCCTTGATGG TTTTCTTGAGCACCG TERM 1039 1194365 - 1194346 - R 100 -10.7 -5.45802 | overlap 1194359 1194361 GCGTGAAAATAAAAA TCGCCGC ATAAAA GCGGCGA ATATCGACTCGGGGA Bphy_4206 1195241 - 1194411 - | putative lipoprotein Bphy_4207 1196545 - 1195433 - | response regulator receiver sensor signal transduction histidine kinase TERM 1040 1195521 - 1195536 + g 70 -4.6 -4.38154 | overlap 1195522 CCCGTCACCTTGCCG CCGTGC ATGT GCACGA TTTTGTGCACGATGT TERM 1041 1196272 - 1196231 - G 81 -7.3 -4.56597 | gap 2, opp_overlap 1196206 1196263, overlap 1196232 1196233 1196262 TGGCTTGTGCAAAAA GTCGACCGCGCCCGCTTCG TAGCCG CGAAACGTGCGCGA-CG-C ATCTTCCGCGGTGGC Bphy_4208 1197132 - 1196542 - | CheB methylesterase TERM 1042 1196587 - 1196573 - G 78 -12.8 -3.55444 | GTGTCAGGCGGCAAA CCGGCG AGG CGCCGG GCCATCAGGGTTGGA Bphy_4209 1198065 - 1197217 - | MCP methyltransferase, CheR-type Bphy_4210 1201582 - 1198085 - | multi-sensor hybrid histidine kinase TERM 1043 1201055 - 1201072 + g 81 -12.7 -3.62597 | GCGCGTGTCGCTGGA GCGCTGC TGGC GCAGCGC TTCTTCGACGGTCAC TERM 1044 1201899 - 1201871 - R 90 -6.7 -5.27938 | gap 1, opp_overlap 1201871 ACTGGCAAAGAAAAA GCCGCATGC-CA AAAGCG TGCGCGTGCGGC TGTTCGAATCGACTG Bphy_4211 1202233 - 1201919 - | hypothetical protein TERM 1045 1203388 - 1203363 - g 79 -11.1 -3.86346 | CGACCTGCTGACAAA GCTCGGCATCG GCGG CGAAGCCGAAC ACCGTGCGCTCGACG Bphy_4212 1202440 - 1203489 + | L-asparaginase II Bphy_4213 1203783 - 1203496 - | hypothetical protein Bphy_4214 1203916 - 1204716 + | GntR domain-containing protein Bphy_4215 1206497 - 1204755 - | dihydroxy-acid dehydratase TERM 1046 1205702 - 1205712 + g 72 -8.2 -4.14739 | CGATCGCCGCATTCG CGCG GAT CGCG TTTTCGAATGCCTCG Bphy_4216 1206977 - 1207906 + | galactose 1-dehydrogenase TERM 1047 1208933 - 1208914 - g 71 -9.2 -3.7282 | overlap 1208911 CGACTGGATCAAGAA CGGCAAGC AGCC GCCCGCCG ATACGCAGACCACGG Bphy_4217 1208000 - 1209004 + | monosaccharide-transporting ATPase Bphy_4218 1209018 - 1210580 + | ABC transporter related Bphy_4219 1210658 - 1211674 + | monosaccharide-transporting ATPase TERM 1048 1211777 - 1211757 - T 76 -4.7 -4.84527 | CCCACAGATTAAAAA GAAGCCC GCACGCT GGACTTC ATGATTTGCGGGCAG Bphy_4221 1213183 - 1212356 - | peptidase M55 D-aminopeptidase Bphy_4222 1214238 - 1213180 - | peptidase S58 DmpA Bphy_4223 1215140 - 1214235 - | binding-protein-dependent transport systems inner membrane component Bphy_4224 1216068 - 1215148 - | binding-protein-dependent transport systems inner membrane component TERM 1049 1215527 - 1215499 - G 74 -11 -3.57792 | gap 1, opp_overlap 1215511, overlap 1215487 1215484 CGACGCACGCGTAAA GCG-CGCCATCAC CGCG GCGACGGCGGCGC CGAGTGTGATTGACG TERM 1050 1216149 - 1216112 - R 90 -17.1 -3.20723 | GCGGCATGAAGCGAA GACGCTGGCCCCGAC CGATGTGC ATCGGGACCAGCGTC GGGCGCGCGATTACT Bphy_4225 1217722 - 1216160 - | extracellular solute-binding protein Bphy_4226 1219724 - 1217826 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1051 1217959 - 1218003 + g 82 -5.7 -4.8048 | gap 3, overlap 1217962 GCGAGCATGCGCTTC GCGTGACGGCGCGCGG-GATCG GCGA CGGGCACCGCGC-CCATCA-GC TTTTTCGTGTACGGA Bphy_4227 1220798 - 1219776 - | asparaginase Bphy_4228 1221745 - 1220795 - | RpiR family transcriptional regulator TERM 1052 1221149 - 1221166 + g 74 -11.3 -3.68619 | GCGCGGGAACGCGAT GGCGATC ACGA GATCGCC TTTGCCTGCGTTGAA TERM 1053 1221388 - 1221431 + g 82 -15.4 -3.14564 | gap 1, overlap 1221398 GTGTGGTGCCGAGAT TGGTGGCGGCCTGTTCGAGCG ATG CGCT-GAACAGTTCGTCGCCA TTCGTCCGGGACTCC TERM 1054 1221969 - 1221959 - g 70 -4.6 -4.34402 | TCTTCGAGATGAAAA CGAC ACA GCCG GATATGGCAAGAGAA Bphy_4229 1221952 - 1222908 + | IclR family transcriptional regulator TERM 1055 1222957 - 1222936 - T 85 -10.8 -4.35524 | opp_overlap 1222936 CGTGCAAAGCGAAAA CAGGCGGC GTTCGA GCCGCCCG TTCGCTTCAACCTGC Bphy_4230 1224085 - 1223012 - | porin Bphy_4231 1224525 - 1224842 + | Rieske (2Fe-2S) domain-containing protein Bphy_4232 1224844 - 1225155 + | hypothetical protein Bphy_4233 1225199 - 1226287 + | Rieske (2Fe-2S) domain-containing protein Bphy_4234 1226280 - 1227038 + | short-chain dehydrogenase/reductase SDR Bphy_4235 1227073 - 1227612 + | cupin 2 domain-containing protein Bphy_4236 1227659 - 1228564 + | alpha/beta hydrolase fold protein Bphy_4237 1228561 - 1229421 + | IclR family transcriptional regulator Bphy_4238 1229421 - 1230227 + | short-chain dehydrogenase/reductase SDR TERM 1056 1230245 - 1230233 - g 72 -3.3 -4.64676 | opp_overlap 1230239 1230240, overlap 1230234 1230237 TCATGTCTAACAAAA CCACC GTC GGCGA ACTGATCGCCGCTTT TERM 1057 1230370 - 1230336 - g 76 -14.3 -3.16564 | overlap 1230350 CCTCGACGCGATCAA CACGCGCGGCAACAT TCGCT ATGTCGGCGCGCGCG GCGAAGCGGGCGCGC Bphy_4239 1230220 - 1231878 + | thiamine pyrophosphate binding domain-containing protein Bphy_4240 1231907 - 1232716 + | aspartate dehydrogenase TERM 1058 1233078 - 1233053 - g 74 -11.1 -3.68529 | gap 1, opp_overlap 1233052 1233072 AGCCGATCAGCGAAA CGCGCGTGCTCG TGG CGAGCGC-CGCG AACACGTTCCGCTAC TERM 1059 1233204 - 1233172 - g 76 -13.6 -3.1505 | gap 2, overlap 1233176 ATGAGCGTGCATGAA CCGATCGGCGTGATCG CGG CGATCACGCCG-T-GG AATTCGCCGATCGCA TERM 1060 1233202 - 1233176 - g 81 -16.6 -2.56596 | overlap 1233172 GCGTGCATGAACCGA TCGGCGTGATCG CGG CGATCACGCCGT GGAATTCGCCGATCG TERM 1061 1234134 - 1234121 - g 73 -9.5 -3.90112 | CGGGCTGGAAGGAAA GCGGC ATGG GCCGC GAGAAAGGCCGCGTC Bphy_4241 1232728 - 1234224 + | aldehyde dehydrogenase TERM 1062 1234272 - 1234300 + G 71 -3.8 -4.57569 | gap 1 AACAGATCACCTACG GCG-TGACGGATC TTGA GACCTGTCGGCGC TTTTTCGCCGACTGG Bphy_4242 1234238 - 1235203 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1063 1235243 - 1235219 - g 71 -9.2 -3.75153 | gap 1 CGCTGCTAACTCAAA CGTCGCG-CCG CACG CGGACGCGCCG CAAACCATCGTCGTG Bphy_4243 1235196 - 1236452 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1064 1236723 - 1236751 + G 70 -5.2 -4.35044 | gap 1, overlap 1236703 CGCTGCTGATCGGCG CGAGCTCGGTCGG CCAG CTGATCG-GCGCG TTTCTGTTTCCGTGG TERM 1065 1236849 - 1236865 + G 72 -3.6 -4.59773 | overlap 1236841 1236847 TTGCATGCGGCTTCG CGCCGT CGTTC GCGGTG TTTTTCGCGCTGCGC Bphy_4244 1236476 - 1237879 + | major facilitator transporter Bphy_4245 1238912 - 1238163 - | short-chain dehydrogenase/reductase SDR TERM 1066 1238933 - 1238946 + r 72 -6.7 -4.36914 | TGTGCAAGAAGGCGT TGACG AGCC CGTCA TTTTCTCACGCACGG Bphy_4246 1239944 - 1238985 - | AraC family transcriptional regulator TERM 1067 1240157 - 1240194 + G 74 -11.3 -3.57144 | overlap 1240160 CGACGCAGATCCGGC GCATCGCCAGCGCCT GAGGGACG AGGCGCTGACGATAC TTTCCCGGTGGGCGA Bphy_4247 1240095 - 1240310 + | hypothetical protein Bphy_4248 1240301 - 1241227 + | LysR family transcriptional regulator Bphy_4249 1241338 - 1242531 + | L-carnitine dehydratase/bile acid-inducible protein F Bphy_4250 1242528 - 1243475 + | pyruvate carboxyltransferase TERM 1068 1244789 - 1244824 + G 91 -10.5 -4.5954 | CGCCGGCGTTGTATG TGATCGGCGCACTGA GCCTGG TCTGTGCGTTGATCA TTTTGTATGGTCTGC Bphy_4251 1243543 - 1244886 + | major facilitator transporter TERM 1069 1244910 - 1244930 + T 100 -14 -5.38497 | opp_overlap 1244910 TGGTCGAATAAAAAA CGCACGGC AGCGA GCCGTGCG TTTTTTCATTTAAGT TERM 1070 1244930 - 1244910 - T 100 -14 -5.4505 | opp_overlap 1244910 TGGTCGAATAAAAAA CGCACGGC AGCGA GCCGTGCG TTTTTTCATTTAAGT Bphy_4252 1245677 - 1244952 - | GntR family transcriptional regulator TERM 1071 1246147 - 1246131 - g 70 -13.7 -2.63073 | opp_overlap 1246140, overlap 1246130 1246128 GCTGTGGAAGAAGAT GGCCGAG AAC CTCGGCC TGAAGCCGGAGTTTC Bphy_4253 1245823 - 1247043 + | Serine--glyoxylate transaminase TERM 1072 1247707 - 1247694 - g 81 -5.2 -4.86731 | opp_overlap 1247680, overlap 1247689 GGTCGCGAAAGAAAA GCGC GGCTTT GCGC AGGGAATCACGCATG Bphy_4254 1247296 - 1248582 + | major facilitator transporter Bphy_4255 1248575 - 1249348 + | 2-keto-4-pentenoate hydratase-like protein TERM 1073 1251855 - 1251843 - g 78 -10.5 -3.95584 | opp_overlap 1251850 TGTCGATGAAGCAAA GCGCG AGG CGCGC AGGATGCTCGATGCG TERM 1074 1252111 - 1252121 + G 77 -5.4 -4.64766 | opp_overlap 1252111, overlap 1252102 CATTGTCATCAGAAG GCAT TCG ATGC TTTTTCGCCTGTGCA Bphy_4256 1249384 - 1252401 + | D-lactate dehydrogenase (cytochrome) Bphy_4257 1254032 - 1252908 - | aminotransferase class I and II TERM 1075 1253773 - 1253753 - G 77 -12.5 -3.58726 | GCGTTTCATAGACAA GCGCGTTCG CGC CGATCGCGC CGTGCGTGATCAGCA TERM 1076 1254182 - 1254154 - R 93 -12.5 -4.2558 | gap 1, opp_overlap 1254160, overlap 1254159 1254170 GATTTCCGATGAAAA GCGAACGCGCGC AAAACG GCG-GCGTTCGC GCGATTCATCAAAAC Bphy_4258 1255230 - 1254247 - | AraC family transcriptional regulator TERM 1077 1255505 - 1255523 + G 77 -11.6 -3.72576 | GGCGCCCGCTCTGGC CGCCTCGC GCC GCGTGGCG TTTCCTCGCAGCGCA Bphy_4259 1255336 - 1256235 + | hypothetical protein TERM 1078 1256861 - 1256829 - g 73 -9.9 -3.8917 | gap 1, opp_overlap 1256829, overlap 1256826 CGGCAATCAGAACAA CCGGCTGGTCGG CGCGGATTAT CCG-CCAGCCGG GACGACGTGGTTCGG TERM 1079 1257094 - 1257068 - g 73 -13.8 -2.91274 | opp_overlap 1257063 1257058, overlap 1257071 CTTACGGCAACCAGA TCATCGTGTTCG ACG CGAACACGATGC GCCGCTTGCGTTCAT TERM 1080 1257091 - 1257071 - g 71 -14.1 -2.70143 | opp_overlap 1257063 1257058, overlap 1257068 ACGGCAACCAGATCA TCGTGTTCG ACG CGAACACGA TGCGCCGCTTGCGTT Bphy_4260 1256467 - 1258656 + | hypothetical protein Bphy_4261 1258808 - 1259062 + | hypothetical protein TERM 1081 1259153 - 1259132 - f 86 -12.3 -4.04206 | gap 1, opp_overlap 1259132 CGACTGTGATACAAA GGGCGC-TCG TTT CGACGCGCCC TTTTTCTTTTGATGC TERM 1082 1259132 - 1259153 + F 100 -12.3 -5.50723 | gap 1, opp_overlap 1259132 CGACTGTGATACAAA GGGCGC-TCG TTT CGACGCGCCC TTTTTCTTTTGATGC Bphy_4262 1259165 - 1259764 + | lysine exporter protein LysE/YggA Bphy_4263 1260996 - 1259782 - | hypothetical protein TERM 1083 1260744 - 1260734 - G 91 -6.8 -5.03314 | TCGATGGGCAAAAAA CACG CTT CGTG CGACCAGTATTCGAA Bphy_4264 1261458 - 1261165 - | hypothetical protein TERM 1084 1261408 - 1261369 - G 87 -17.2 -2.91264 | overlap 1261371 GGGCGCACCGAGATA CACGCCGACGCCGACATC CGCC GATGCCGCCGTCGACATG CACACAGCGGCCACA TERM 1085 1261406 - 1261371 - G 75 -14 -3.0094 | overlap 1261369 GCGCACCGAGATACA CGCCGACGCCGACATC CGCC GATGCCGCCGTCGACA TGCACACAGCGGCCA TERM 1086 1261678 - 1261640 - R 100 -19.7 -4.2704 | gap 1, opp_overlap 1261645, overlap 1261645 TGCAGGAGGAAGAAA GCG-AACGGCCCGCGTCA CGCA TGACGCGGGCCGTTACTC GAGACGGAATCAGGC TERM 1087 1261672 - 1261645 - R 100 -22.8 -3.38832 | opp_overlap 1261645, overlap 1261640 GAGGAAGAAAGCGAA CGGCCCGCGTCA CGCA TGACGCGGGCCG TTACTCGAGACGGAA TERM 1088 1261645 - 1261672 + r 100 -22.8 -3.14132 | opp_overlap 1261640 1261645 GAGGAAGAAAGCGAA CGGCCCGCGTCA CGCA TGACGCGGGCCG TTACTCGAGACGGAA Bphy_4265 1263391 - 1261688 - | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bphy_4266 1264442 - 1263453 - | rhodanese domain-containing protein TERM 1089 1263658 - 1263679 + g 71 -7.3 -4.16842 | gap 1, opp_overlap 1263647 ATCACGAGCTTCTGG TCG-CGCGGA TAC TTCGCGACGA TTTCTTCGAGCTGGC TERM 1090 1264711 - 1264670 - R 93 -10.9 -4.63527 | overlap 1264673 1264676 CGACTACGTCAAAAA CAAGAG-GCGCGGCACCGG ATGGAA CCTGCGCCGCGCGCTCT-G CATGATGCGATTGAT TERM 1091 1264709 - 1264673 - R 100 -13.7 -4.42748 | gap 1, overlap 1264670 1264676 CTACGTCAAAAACAA GAG-GCGCGGCACCGG ATGGAA CCTGCGCCGCGCGCTC TGCATGATGCGATTG TERM 1092 1264705 - 1264676 - R 82 -14.2 -2.87725 | overlap 1264673 1264670 CGTCAAAAACAAGAG GCGCGGCACCGG ATGGAA CCTGCGCCGCGC GCTCTGCATGATGCG Bphy_4267 1264990 - 1264739 - | hypothetical protein TERM 1093 1265162 - 1265178 + H 75 -5.8 -4.56597 | gap 1, opp_overlap 1265148, overlap 1265147 1265166 AGGGCGGCGCGGCTT CCGGCGG GGCG CC-CCGG TTTTTAACCGGCGCG Bphy_4268 1265391 - 1265927 + | methylated-DNA--protein-cysteine methyltransferase TERM 1094 1265978 - 1265954 - T 100 -14.3 -5.30155 | CGACGAACCAAAAAA TAGCCCGTCCA AAG TGGGCGGGCTA CGTAAACGCCGTTGT Bphy_4269 1267765 - 1266095 - | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Bphy_4270 1268106 - 1271633 + | histidine kinase TERM 1095 1271967 - 1271949 - gT 72 -8.8 -3.85878 | opp_overlap 1271956 GAACAAGATCAACAA GACAGCCG CGG CGGCCATC GCAAGCGCCGCATTT Bphy_4272 1275406 - 1272968 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Bphy_4271 1271926 - 1273038 + | porin TERM 1096 1274247 - 1274259 + gF 77 -10.5 -3.84451 | opp_overlap 1274230 CCGAACGGCTTGCTC GCCGC GCA GCGGC TTTCGATTTCGCGCA TERM 1097 1275622 - 1275634 + FH 86 -4.7 -5.27335 | TGCTTTCAGCGTTTA CGGCG CGC CGCGG TTTTTGTTTAGGCCG Bphy_4273 1276023 - 1278044 + | coenzyme A transferase TERM 1098 1278206 - 1278222 + G 88 -9.3 -4.60487 | opp_overlap 1278191, overlap 1278207 GCGCGGGCTCGAAGC TCGCCGG CTA CCGGCGC TTTTTCGGCGTGCTG TERM 1099 1278207 - 1278221 + G 77 -12.8 -3.3581 | opp_overlap 1278191, overlap 1278206 CGCGGGCTCGAAGCT CGCCGG CTA CCGGCG CTTTTTCGGCGTGCT Bphy_4274 1278064 - 1278390 + | hypothetical protein TERM 1100 1278499 - 1278526 + G 70 -7.9 -3.96531 | gap 1, overlap 1278500 GCGTGCCGATGCCGT C-GATGTGCATT TCGAT AATGCACATCTG TTTCTCGATCTGTCC TERM 1101 1278500 - 1278524 + G 74 -11.6 -3.5697 | overlap 1278499 CGTGCCGATGCCGTC GATGTGCATT TCGAT AATGCACATC TGTTTCTCGATCTGT TERM 1102 1278539 - 1278559 + G 74 -11.1 -3.60627 | CTGTTTCTCGATCTG TCCGACGGC CGC GCCGTCGAA TTTCCACTCACCTGG Bphy_4275 1278482 - 1278721 + | hypothetical protein TERM 1103 1278754 - 1278774 + F 81 -9 -4.32402 | gap 1, overlap 1278765 GATGTGTCGATGTGG CGCGCC-CT ATGC AGCGGCGCG TTGTTTTCGTTCGCC TERM 1104 1279099 - 1279051 - f 90 -11.1 -4.40561 | gap 1, opp_overlap 1279060, overlap 1279055 1279059 1279060 GCTCTCTAAAAAGAA CAAATGA-AGCGGCGCGCATGC TTTAGG GCATGCGCGCCGTTGTTGTTTG TGGCCATCGTGTCCG TERM 1105 1279093 - 1279055 - f 93 -9.6 -4.76802 | gap 1, opp_overlap 1279060, overlap 1279051 1279059 1279060 TCTAAAAAGAACAAA TGAAGCGGCGCGCATGC TTTAGG GCATGCGCGCCG-TTGT TGTTTGTGGCCATCG TERM 1106 1279090 - 1279059 - f 100 -17.3 -3.79831 | opp_overlap 1279060, overlap 1279055 1279051 1279060 AAAAGAACAAATGAA GCGGCGCGCATGC TTTAGG GCATGCGCGCCGT TGTTGTTTGTGGCCA TERM 1107 1279060 - 1279089 + F 100 -21.5 -4.15703 | opp_overlap 1279059 1279055 1279051 1279060 AAAGAACAAATGAAG CGGCGCGCATGCT TTAG GGCATGCGCGCCG TTGTTGTTTGTGGCC TERM 1108 1279089 - 1279060 - f 100 -20.8 -2.85458 | opp_overlap 1279060, overlap 1279059 1279055 1279051 AAAGAACAAATGAAG CGGCGCGCATGC TTTAGG GCATGCGCGCCG TTGTTGTTTGTGGCC TERM 1109 1279236 - 1279224 - f 72 -6.2 -4.4078 | CCGTCGGAATGAAAA CGGC TATCT GCCG CTCCTCAAAATATTC Bphy_4276 1279420 - 1279887 + | hypothetical protein Bphy_4277 1279904 - 1281175 + | hypothetical protein TERM 1110 1281206 - 1281222 + T 100 -15.1 -5.14563 | opp_overlap 1281206 TCACGCAAAAACAAA GGGGCGC ATT GCGCCCC TTTTTTCATCGAACG TERM 1111 1281222 - 1281206 - T 100 -15.1 -4.89063 | opp_overlap 1281206 TCACGCAAAAACAAA GGGGCGC ATT GCGCCCC TTTTTTCATCGAACG Bphy_4278 1282643 - 1281243 - | citrate transporter TERM 1112 1283042 - 1283071 + G 72 -8.5 -4.12942 | gap 1 TGCCCGCGACCTACA GCGACGTCCTGCGC CGC GCGATGGAC-TCGC TTTTCCGCACTTTCG TERM 1113 1284205 - 1284249 + G 76 -13.6 -3.14132 | gap 2, opp_overlap 1284158, overlap 1284203 GAACGCATCGATGCG CGCGCGCTTGCGCCGTTCATCG GAC CGGTGCGCGG-GCAGGC-CGCG TTCGTAGCGCCCGCG Bphy_4279 1283005 - 1284465 + | PAS modulated sigma54 specific transcriptional regulator TERM 1114 1284510 - 1284479 - f 73 -12.3 -3.1372 | gap 1, overlap 1284477 1284482 GACCGTCGAGCAATA TGAGCAGCGCTCGC GGCGA GCG-GCGCTGCGCA GTAGGATCGTGGTGC TERM 1115 1284507 - 1284482 - f 73 -12.6 -2.77523 | gap 1, overlap 1284479 1284477 CGTCGAGCAATATGA GCAGCGCTCGC GGCGA GCG-GCGCTGC GCAGTAGGATCGTGG Bphy_4280 1284558 - 1285094 + | hypothetical protein TERM 1116 1285266 - 1285284 + G 79 -10.2 -4.07568 | overlap 1285244 CGCGCTCGCCGCGTG CAGCAGCG CGC CGCCGCTG TTTTCGCCGGACGGA Bphy_4281 1285168 - 1285446 + | hypothetical protein TERM 1117 1285712 - 1285689 - g 76 -13.8 -3.07816 | opp_overlap 1285689 GCGTCACCGACGCAA GCGCGTTGCG CTGA CGCATCGCGC GAGGCGCTTGCGTGC Bphy_4282 1285431 - 1285871 + | hypothetical protein Bphy_4283 1285907 - 1286110 + | hypothetical protein Bphy_4285 1286528 - 1286821 + | histone family protein nucleoid-structuring protein H-NS TERM 1118 1286826 - 1286865 + F 86 -6.3 -4.97461 | gap 1, opp_overlap 1286823, overlap 1286833 1286834 TCGGCGAGTGAAGCT CGACGCCTGCGCCCGTCG ATCGG CGATGGGCGCGTTTG-CG TTTTTCCTGTTTCTT TERM 1119 1286833 - 1286859 + F 95 -13.7 -4.01411 | opp_overlap 1286823, overlap 1286826 1286834 GTGAAGCTCGACGCC TGCGCCCGTCG ATCGG CGATGGGCGCG TTTGCGTTTTTCCTG TERM 1120 1286834 - 1286858 + F 84 -15 -2.99762 | opp_overlap 1286823, overlap 1286833 1286826 TGAAGCTCGACGCCT GCGCCCGTCG ATCGG CGATGGGCGC GTTTGCGTTTTTCCT TERM 1121 1287498 - 1287482 - f 82 -13.7 -3.17723 | GCAGCTGCAACTGAA CCTCGCG TAT CGCGAGG AAGAGGGCGAGTTGA TERM 1122 1287583 - 1287617 + F 100 -17.9 -3.72695 | overlap 1287585 CTCTGTTTCTGGCCG AAGCCCGAAGCGCCC TGAAT GGGTGCTTCGGGCTC TTTCATGCGGGCGAT TERM 1123 1287585 - 1287615 + F 100 -20.5 -3.44848 | overlap 1287583 CTGTTTCTGGCCGAA GCCCGAAGCGCCC TGAAT GGGTGCTTCGGGC TCTTTCATGCGGGCG Bphy_4287 1287781 - 1289382 + | peptide chain release factor 3 TERM 1124 1289834 - 1289856 + F 100 -16.2 -3.90318 | CGACATGCTGCATCG CGCGCGGCGG GAG CGGCCGCGCG TTTGTCGCATCGTCG TERM 1125 1290037 - 1290009 - f 70 -11.7 -2.85996 | overlap 1290008 GATGACTGATGAAAT CGCGCGCCTCG CTGTGCC CGAAGCGCGCA CTCACCTCACTGCGG TERM 1126 1291221 - 1291240 + G 93 -2.8 -5.40474 | gap 1, opp_overlap 1291211, overlap 1291224 AATCAGCGATACGCG TATCGCGGG CTG CTCGCG-TG TTTTTTTGGCGGCGT TERM 1127 1291224 - 1291238 + G 83 -9.2 -4.34482 | opp_overlap 1291211, overlap 1291221 CAGCGATACGCGTAT CGCGGG CTG CTCGCG TGTTTTTTTGGCGGC TERM 1128 1291844 - 1291823 - g 86 -7.1 -4.8622 | opp_overlap 1291841, overlap 1291824 GCGCGTAACGAAAAA TGGCGCGGC GATC GTCGCGCCG CGTCTGCGGCTGTCT TERM 1129 1291964 - 1292020 + G 79 -2.2 -5.00884 | gap 2, opp_overlap 1291941 GATTCGTCCCGAAGA CGAAGCGGCACATCG-CGAGT-TCGTCG AAT CGATGACGCCCGACGATCTGCGCCTGCG TTTTTTCGGCGCGGT TERM 1130 1292458 - 1292430 - g 100 -6.6 -5.40464 | opp_overlap 1292431 GATGACAAACAAAAA GGCGGCGCAC GTGGGTTCG GCGCGTCGCC TGCATGTTCTGCCAA Bphy_4289 1290060 - 1292483 + | GCN5-related N-acetyltransferase Bphy_4290 1293056 - 1292514 - | hypothetical protein TERM 1131 1292907 - 1292927 + g 72 -8.9 -3.96148 | CTCGATCTGCTTCAT CGCGGTGGC GCG GTCGTCGCG TTTCTGCTGCGCGCG TERM 1132 1293843 - 1293859 + H 100 -10.8 -5.58454 | opp_overlap 1293843 GAGCAACCCTTAACA GCCCGC CACGA GCGGGC TTTTTTTCGTCTAGC Bphy_4291 1294023 - 1303262 + | filamentous haemagglutinin outer membrane protein TERM 1133 1303458 - 1303431 - f 77 -12 -3.54129 | gap 1 CAGATGTGGCGGAAA GC-GTGAGCGGCC GCG GGCCGCTTACCGC ACAGCAGGAAGAATC Bphy_4292 1303490 - 1305271 + | polypeptide-transport-associated domain-containing protein Bphy_4293 1305278 - 1305529 + | hypothetical protein TERM 1134 1306055 - 1306039 - T 100 -9.4 -4.88228 | ATGCAACAGTAAAAA TGCCCC GCACA GGGGCA ACGCCAGCAAACCGG TERM 1135 1306170 - 1306156 - T 77 -7.8 -4.25676 | AACCAAACCGCAAAA GGCGTA GCC CACGCC GAGAAGGCAAAGACA Bphy_4294 1307060 - 1306212 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Bphy_4295 1307860 - 1307117 - | short-chain dehydrogenase/reductase SDR Bphy_4296 1308777 - 1307947 - | amidohydrolase 2 Bphy_4297 1309833 - 1308793 - | pyridoxal 4-dehydrogenase Bphy_4298 1311182 - 1309875 - | Altronate dehydratase TERM 1136 1310229 - 1310205 - G 81 -12.9 -3.61398 | opp_overlap 1310207 1310224 TCCCGTCGTGAACAA GATCACATGCG CGC CGCACGCGATC AATTCGGCGATCTCC TERM 1137 1310479 - 1310530 + g 95 -12.9 -4.3467 | opp_overlap 1310469, overlap 1310478 1310477 1310480 1310481 TAATAGCGCGCGGCC TTCGCGACGCACGCGACGATTTC ATCGCC GAGATCGTCGCGCGCCGCGCGGC TTTTCATATGAAACT TERM 1138 1310480 - 1310529 + g 89 -16.4 -3.2032 | opp_overlap 1310469, overlap 1310478 1310477 1310479 1310481 AATAGCGCGCGGCCT TCGCGACGCACGCGACGATTTC ATCGCC GAGATCGTCGCGCGCCGCGCGG CTTTTCATATGAAAC TERM 1139 1310481 - 1310528 + g 83 -17.7 -2.51871 | opp_overlap 1310469, overlap 1310478 1310477 1310480 1310479 ATAGCGCGCGGCCTT CGCGACGCACGCGACGATTTC ATCGCC GAGATCGTCGCGCGCCGCGCG GCTTTTCATATGAAA TERM 1140 1310650 - 1310613 - G 72 -12.7 -3.17054 | gap 1, opp_overlap 1310615 1310616, overlap 1310605 GATGAAATGATCGAA CGCGCGGC-CCACGGC CGGATTT GCCGTGATGCCGCTCG TGCCGTCCGAGCCGC TERM 1141 1310776 - 1310786 + g 74 -2.4 -4.75372 | TATTGAATCGTGCTG CGCG TGC CGCC TTTTTCCTGAATCGT Bphy_4299 1311515 - 1311198 - | SAF domain-containing protein Bphy_4300 1312542 - 1311517 - | monosaccharide-transporting ATPase TERM 1142 1312435 - 1312393 - G 74 -4.7 -4.56597 | overlap 1312429 1312430 CGCTTTGGTCAAAAA GCTCGGACTGACGAACGCG CCGAT CACGATCAGCAACGCGAGC GCGGGCACCAGCGCG Bphy_4301 1314058 - 1312532 - | ABC transporter related TERM 1143 1312790 - 1312817 + g 70 -5.4 -4.3534 | GAGCACATCGGGATT GGTGGCGAGCGC GCGG GCCATCACCACC TTTTGCTGATTACCC Bphy_4302 1315104 - 1314055 - | periplasmic binding protein/LacI transcriptional regulator Bphy_4303 1315345 - 1316157 + | IclR family transcriptional regulator Bphy_4304 1316709 - 1316251 - | thioesterase superfamily protein Bphy_4305 1316926 - 1318536 + | methyl-accepting chemotaxis sensory transducer TERM 1144 1318564 - 1318603 + T 100 -21 -2.5805 | gap 1, opp_overlap 1318570, overlap 1318565 1318570 CGAACCAACGCATAT GA-AAAAGCCCGCGAAGCG AAA TGCTTCGCGGGCTTTTGTC GTTCTGCGCGCTGGT TERM 1145 1318565 - 1318601 + T 100 -20.3 -2.8294 | opp_overlap 1318570, overlap 1318564 1318570 GAACCAACGCATATG AAAAAGCCCGCGAAGCG AAA TGCTTCGCGGGCTTTTG TCGTTCTGCGCGCTG TERM 1146 1318570 - 1318596 + T 100 -20.2 -4.58466 | opp_overlap 1318570, overlap 1318565 1318564 AACGCATATGAAAAA GCCCGCGAAGCG AAA TGCTTCGCGGGC TTTTGTCGTTCTGCG TERM 1147 1318596 - 1318570 - T 100 -19.5 -4.82154 | opp_overlap 1318570 1318565 1318564 AACGCATATGAAAAA GCCCGCGAAGC GAAAT GCTTCGCGGGC TTTTGTCGTTCTGCG Bphy_4306 1319734 - 1318637 - | N-acylglucosamine 2-epimerase TERM 1148 1319292 - 1319250 - G 70 -14 -2.57132 | opp_overlap 1319288, overlap 1319249 1319276 TTCGTCGTCGAGAAG TCGGCGGCGAGGGCGGCGTG CAG CAAGCCATCGTCGGCGCCGA AGCGGTCTTCGATCA TERM 1149 1319827 - 1319795 - H 75 -9.8 -3.82083 | gap 2 TCAGCATAAGGCAAA CGGCGC-CC-GCCGGG CAT CGCGGCCGAAGCGCCG TAAGGCAAAGTCAAC TERM 1150 1319893 - 1319948 + G 71 -9.7 -3.74693 | overlap 1319894 TATGGAACTCATTTC CCGGCTCGTGCTCGCAGC-GATACTCG GCAG CGTG-ATCGGCTTCGAGCGCGAGCGGC TTTCATGGGCTGCGG Bphy_4307 1319867 - 1320553 + | MgtC/SapB transporter TERM 1151 1320629 - 1320616 - f 76 -4.5 -4.82901 | overlap 1320600 1320619 CGGGCTCTAGAAAAA CACCG CTGG CAGTG TTGACGGCGCCTCCG TERM 1152 1320936 - 1320978 + G 72 -8.5 -4.08216 | AAGGCTTCGAACTTC CCGATGTCGTGCTGGCG-GCT GCC GGTGCGCCAG-ATGGCGTCGG TTTTGCGGCGGGTGC TERM 1153 1321058 - 1321045 - g 71 -4.5 -4.56597 | gap 1, overlap 1321046 1321048 GGCGGCGTCGAAAAA CCAGCC GGC GGC-GG CCCATCTACATGACG Bphy_4308 1320680 - 1321954 + | hypothetical protein Bphy_4309 1322288 - 1322446 + | hypothetical protein TERM 1154 1322533 - 1322517 - f 95 -15.1 -3.71649 | opp_overlap 1322517 CGGCGAAACTGGAAA GCCCGGC CTT GCCGGGC TTTTGTTTTTCTGCC TERM 1155 1322517 - 1322533 + F 100 -15.1 -5.35224 | opp_overlap 1322517 CGGCGAAACTGGAAA GCCCGGC CTT GCCGGGC TTTTGTTTTTCTGCC TERM 1156 1322914 - 1322941 + G 74 -10.5 -3.72576 | overlap 1322915 AGACTTCGCGCTCGA TCGTCGCCAGC CTTATC GCTGGCGGCGC TTTGCTCGGCGCCGG TERM 1157 1322915 - 1322940 + G 73 -14 -2.83403 | overlap 1322914 GACTTCGCGCTCGAT CGTCGCCAGC CTTATC GCTGGCGGCG CTTTGCTCGGCGCCG Bphy_4310 1322883 - 1323161 + | hypothetical protein TERM 1158 1323249 - 1323212 - f 82 -13.4 -3.21099 | gap 1, opp_overlap 1323216, overlap 1323213 1323215 CGTCGCGAGGATGAA CCAGGGCCGGC-CGCTC ACAAG GAGCGCGCCGGCCTTGT CGCGTCTGGCGTCCG TERM 1159 1323248 - 1323213 - f 85 -16.9 -2.52516 | gap 1, opp_overlap 1323216, overlap 1323212 1323215 GTCGCGAGGATGAAC CAGGGCCGGC-CGCTC ACAAG GAGCGCGCCGGCCTTG TCGCGTCTGGCGTCC TERM 1160 1323246 - 1323215 - f 76 -13.7 -2.80016 | gap 1, opp_overlap 1323216, overlap 1323213 1323212 CGCGAGGATGAACCA GGGCCGGC-CGCTC ACAAG GAGCGCGCCGGCCT TGTCGCGTCTGGCGT TERM 1161 1323216 - 1323245 + F 90 -17.2 -3.34962 | gap 1, opp_overlap 1323215 1323213 1323212 GCGAGGATGAACCAG GGCCGGC-CGCTC ACAAG GAGCGCGCCGGCC TTGTCGCGTCTGGCG TERM 1162 1323524 - 1323498 - f 76 -13.1 -3.14132 | overlap 1323478 GCCGTGCTCGACGAA CTCATCGACGC GGGCT GCATCGATGAG CAGGCCAGCCACCTG Bphy_4312 1323753 - 1324370 + | hypothetical protein Bphy_4313 1325820 - 1324390 - | polyhydroxyalkanoate depolymerase, intracellular Bphy_4314 1325999 - 1326664 + | glutathione S-transferase domain-containing protein TERM 1163 1326681 - 1326701 + T 85 -15.4 -3.17212 | GTTTTGGATTTCAGA CGCGGCGC ACCGG GCGCCGCG TTGCTGCAGTACTGC Bphy_4315 1328688 - 1326718 - | methyl-accepting chemotaxis sensory transducer TERM 1164 1327276 - 1327245 - G 78 -15.8 -2.71364 | CCATCGTCGTAACGA CGCGCTCGACCGCG CGGC CGCCGTCGAGTGCG GCCTCCGATGCGCTC TERM 1165 1327514 - 1327538 + g 80 -12.1 -3.72576 | overlap 1327525 CCTTCGCCGATGCCG TCGATCGCCTG CAT CAGGCGGCCGA TTTCATCGGCGCGCC TERM 1166 1328671 - 1328613 - G 70 -2.2 -4.59853 | gap 1, overlap 1328614 1328615 TGAACGCGGCAAAAA TGGCCGCGACGAGCGCGCACGACAG CATGGCGAGC CTGGCGCCCACGCTGG-CGCGGCGC AGTGAAAGGATGTCC Bphy_4316 1331327 - 1328820 - | heavy metal translocating P-type ATPase TERM 1167 1330774 - 1330788 + g 71 -12.8 -2.95007 | overlap 1330771 ACGGCGCCGAGTTCA CGCCGC ACG GCGGCG TCCTTGTCTTCGGTG TERM 1168 1330959 - 1330970 + g 79 -7.2 -4.56597 | CGTCACGCCGGGAAT GCGC GCGA GCGC TTTTTCGACGCGCCC TERM 1169 1332010 - 1332067 + G 73 -14.8 -2.52543 | gap 1, opp_overlap 1331999 1332043 AACACGCTGCGTCAC GCGTCGGCGCTGCCGCCCGTCGGCG CGCACAATC CGCCGACGCCCGGCATCGAC-ACGC TGGATTCGACCGCCT Bphy_4317 1331770 - 1333182 + | hypothetical protein TERM 1170 1334528 - 1334488 - g 84 -11.8 -3.96148 | overlap 1334489 GCTGGTCAGCAGAAA GCCGCCAG-CGCGCCCGCCG TGG CATCGGGCGCATCCGGCG-C GAGCGGCGCGAGCGG Bphy_4318 1333399 - 1337205 + | hypothetical protein Bphy_4319 1337493 - 1338131 + | rare lipoprotein A Bphy_4320 1339714 - 1338149 - | transcriptional regulator Bphy_4321 1339876 - 1340967 + | spermidine/putrescine ABC transporter ATPase subunit Bphy_4322 1341026 - 1342078 + | extracellular solute-binding protein TERM 1171 1342268 - 1342307 + G 79 -4.1 -4.93296 | gap 1, opp_overlap 1342267 1342270, overlap 1342269 1342270 GCAGCGGAAGCGAAG AAGCGCGCGGTGGCGCTG CTGCT CATCGC-ACCGCTCGCAA TTTTTCTGCTGATGA TERM 1172 1342305 - 1342270 - g 77 -11.1 -3.73336 | gap 1, opp_overlap 1342269 1342268 1342270, overlap 1342267 AGCGGAAGCGAAGAA GCGCGCGGTGGCGCTG CTGCT CATCGC-ACCGCTCGC AATTTTTCTGCTGAT TERM 1173 1343364 - 1343402 + G 82 -6.5 -4.63586 | gap 1, overlap 1343367 1343369 TCAACTGGGGCATGG CGTGCGCGCTCGGTGGGC TGCT GCTCGCCGCGA-CGCTCG TTTTGTATGTGATCT Bphy_4323 1342184 - 1343455 + | binding-protein-dependent transport systems inner membrane component TERM 1174 1344218 - 1344233 + G 75 -4 -4.60073 | overlap 1344220 TATTGCTGCCCTGGC TACGAT TCTT ATCGTG TTTTCTACTTGTCTG Bphy_4324 1343466 - 1344305 + | binding-protein-dependent transport systems inner membrane component Bphy_4325 1344462 - 1344728 + | transglycosylase-associated protein TERM 1175 1344771 - 1344744 - T 78 -9.8 -4.08216 | opp_overlap 1344745, overlap 1344745 1344750 TCAGCGGCTCGAAAA GGGAAACCCGGC TTCG GCCGGGTTTGCT TTTTTCTGCCTCGAA TERM 1176 1344745 - 1344770 + T 100 -13.3 -5.28176 | opp_overlap 1344745 1344744 1344750 CAGCGGCTCGAAAAG GGAAACCCGGC TTCG GCCGGGTTTGC TTTTTTCTGCCTCGA TERM 1177 1344770 - 1344745 - T 79 -13.3 -3.04715 | opp_overlap 1344745, overlap 1344744 1344750 CAGCGGCTCGAAAAG GGAAACCCGGC TTCG GCCGGGTTTGC TTTTTTCTGCCTCGA TERM 1178 1344765 - 1344750 - T 83 -11.8 -3.92659 | opp_overlap 1344745, overlap 1344745 1344744 GCTCGAAAAGGGAAA CCCGGC TTCG GCCGGG TTTGCTTTTTTCTGC Bphy_4326 1346243 - 1344789 - | RND efflux system outer membrane lipoprotein TERM 1179 1344966 - 1344979 + g 75 -4.5 -4.67234 | overlap 1344953 1344974 GCCGCCCGCCGCATA TTGCG CCTG CGCGA TTTTTGCGCTTGCCT TERM 1180 1345929 - 1345956 + g 76 -9.1 -4.09739 | ATCGATTGCGGGGAA CTGCGTCGCGC CCGCTT GCGCAACGTAG TTTTCGCGCGCTTGC Bphy_4327 1347391 - 1346255 - | ABC-2 type transporter Bphy_4328 1348344 - 1347388 - | ABC transporter related Bphy_4329 1349324 - 1348341 - | secretion protein HlyD family protein TERM 1181 1348672 - 1348705 + g 74 -5.2 -4.4648 | gap 1, overlap 1348673 ACGCGGTACAGCGTG TCGTAGACGCGGCCC CTGGC GGGC-GCGTTCACGC TTTTCTGGTCAAGCT Bphy_4330 1350028 - 1349321 - | TetR family transcriptional regulator TERM 1182 1349479 - 1349450 - G 78 -12.9 -3.54424 | opp_overlap 1349439 1349437 1349436 CTCGATCGCGGGAAA GCCGCGAATGCTT TGCC AAACCTTCGCGGC GGCTTGCGGCAGCAT TERM 1183 1349795 - 1349836 + g 70 -13.7 -2.50113 | opp_overlap 1349785 1349784 1349793 1349794, overlap 1349794 1349802 GAAACCGACAGAAGG CGCGAGCCGTTCTTCGACG ATCG CGTCGAGCAGCGTTTCGCG ATTCGTGAAGTAGTA Bphy_4331 1350381 - 1351019 + | two component LuxR family transcriptional regulator TERM 1184 1351107 - 1351080 - g 77 -11.2 -3.74872 | overlap 1351083 ACTCACTGCAGGAAA GGATCGACGTGC TCGC GCTCGGCGATCC CGCCGTTGCGCAGGA Bphy_4332 1351016 - 1351393 + | Hpt domain-containing protein TERM 1185 1351370 - 1351408 + T 71 -11.7 -3.0094 | gap 1, opp_overlap 1351369, overlap 1351355 GCGCGCCTGAATGAC CGGCTTGGCGCGCTGCTT ACCT GAACAGCGCGC-ACGCCG TATCTATCGCTAACA TERM 1186 1351596 - 1351614 + T 100 -13.8 -4.47328 | overlap 1351586 GTTTTGCGGTGTTTG GGCCCGCG TTC TGCGGGCC TTTTATCGTCGGCTT Bphy_4333 1353758 - 1351638 - | response regulator receiver protein Bphy_4334 1354400 - 1353771 - | two component LuxR family transcriptional regulator TERM 1187 1354348 - 1354372 + g 76 -5.7 -4.45945 | overlap 1354353 GCGCCGCGAATCATC GGATGGTCGTC GAC GATGACAATTC TTTTCATTGATGGCT TERM 1188 1354800 - 1354816 + G 72 -6.5 -4.2828 | GCAGCGCGAAGCCTG GACTGCG AAT CGTGGTC TTTTCGTCCGTCGAC Bphy_4335 1354589 - 1355173 + | two component LuxR family transcriptional regulator TERM 1189 1355307 - 1355325 + G 75 -12.4 -3.48924 | opp_overlap 1355307 1355306 ATGCGCTTGCAGAAG GCGACGTG GCG CGCGTCGC TTGTCTCGCGCATCG TERM 1190 1355413 - 1355444 + G 84 -15.1 -3.41051 | opp_overlap 1355386 1355408 GCTGGAAGCAGCGGG GCGGGCGAGCGAG AGCGAC CGCGCTCGCCTGC TTCTGGTGGCGCTCA Bphy_4336 1355195 - 1355494 + | Hpt protein TERM 1191 1355729 - 1355766 + T 76 -12.7 -3.05765 | gap 1 GGTTTCCGCGCGCAG GGCTGAG-AGCCGCGCAT TAT GTGCGCCGCTGCCCAGCC TGTCTGTGTAGCCTT TERM 1192 1356436 - 1356460 + T 75 -10 -3.68988 | gap 2, overlap 1356456 ATGCAGATCGAGCCA CGCAGGCGTGGC CGC GCC-CGCC-GCG TTGTCTTGCGTCGCG TERM 1193 1356649 - 1356620 - T 100 -22.2 -4.46926 | opp_overlap 1356648 GATTCCATCAGAAAA GGGCTGCGCGGC TTGCGG GCCGCGCAGCCC GGTCAGAGGCAGCCG Bphy_4338 1366046 - 1356666 - | YadA domain-containing protein TERM 1194 1357933 - 1357901 - G 78 -15.5 -2.78384 | opp_overlap 1357926 CCGTGTCGTACGAGA CGGCATCGGGCGAAG CGC CGCCGCCCGATGCGG CGGCAGCGGCGAGCG TERM 1195 1358111 - 1358149 + g 79 -14.7 -3.01712 | CTGCTGCGACGTTGA CGATCTGCCG-CTGCAGCG TGT CGCTGCCGACGG-AGATCG TGTTCGCACGCGAGG TERM 1196 1361871 - 1361922 + g 86 -10.6 -4.26903 | CGATCCGCCGCCGAG CGCGATGGCGTTCGACGCGTTGGC GCGC GCATTGGCGCCGAGCGCGATCGCG TTTTCGTCCGCTGCC TERM 1197 1364414 - 1364464 + g 73 -13.8 -2.86164 | overlap 1364394 1364427 1364429 CGTTCGTCAGCGCGA CGGGCGCATGCGCGAGTGTGCCGC CGA GCGTCACGCTGTTGTGCGCGCCCG TATCGTAGTTGACGC Bphy_4339 1366431 - 1366769 + | hypothetical protein Bphy_4340 1366793 - 1368313 + | hypothetical protein TERM 1198 1368735 - 1368762 + G 81 -13.5 -3.64703 | ATCCGACCTATCGAC GCCACTCGATG CGTATA CGTCGAGTGGC TTTGGCTCGACGCCG Bphy_4341 1368310 - 1369131 + | hypothetical protein Bphy_4342 1369128 - 1369844 + | hypothetical protein TERM 1199 1369991 - 1370008 + G 75 -6.9 -4.44046 | TCAGGTCGCTGTATC GCGCGTA TAGC TTCGCGC TTTCTTTACCGTAAC Bphy_4343 1369825 - 1370022 + | hypothetical protein TERM 1200 1370576 - 1370566 - g 72 -8.2 -4.05033 | opp_overlap 1370566 1370564 GGCAGGCGAGAGAAA GGCG GTG CGCC TGTTGCTGCCCGGCG Bphy_4344 1370042 - 1371061 + | Flp pilus assembly protein CpaB TERM 1201 1371341 - 1371387 + G 70 -13.8 -2.62184 | opp_overlap 1371367 GGCGAATGTCGTCGA CGGGCG-CGTGATGCTGCTCGC CGAAA GCGCG-GGCATCACGTCGCTCG TCGTGTGGAACGAGC TERM 1202 1371584 - 1371557 - g 72 -8.3 -4.11216 | overlap 1371574 CGTGCATCGCGAAAA GGCGGCCGCAG TGAAAG CCGCGATCGCC GATATGACGAACGTG TERM 1203 1371657 - 1371643 - g 72 -3.5 -4.63486 | overlap 1371645 ATGCGCTGAAGAAAA CCCTG CATTT CAAGG TGCAGATCATGGAAG TERM 1204 1372186 - 1372199 + G 95 -8.1 -5.0133 | opp_overlap 1372185 ACGCGTTGAATGGAT CGGCA GGGA TGCCG TTTTTTGCGCGGCTG Bphy_4345 1371093 - 1372448 + | type II and III secretion system protein TERM 1205 1373006 - 1373022 + G 81 -9.4 -4.2828 | opp_overlap 1373004, overlap 1372983 GCGCTCGACGATATC CTCGCG CGTGA CGCGAG TTTTCGTCGCTCGGA Bphy_4346 1372454 - 1374145 + | FHA domain-containing protein Bphy_4347 1374171 - 1374998 + | type II secretion system protein TERM 1206 1375545 - 1375532 - g 86 -9.5 -4.57341 | overlap 1375519 AAGGCCGTCGAAAAA GGCCC GGAC GGGCC GTTGCGACGCGAATT Bphy_4348 1375004 - 1375882 + | type II secretion system protein Bphy_4349 1375879 - 1376229 + | hypothetical protein Bphy_4350 1376226 - 1377008 + | TadE family protein TERM 1207 1376995 - 1377021 + F 80 -10 -4.00532 | ATGATGTTCTTACTG CGACGCCGCGGT AAT GCCGATGCGTCG TTTCGTGTTTGCCGC Bphy_4351 1377008 - 1377592 + | lytic transglycosylase catalytic TERM 1208 1377620 - 1377604 - T 100 -11.5 -5.95166 | opp_overlap 1377604 TTGAACGAAAAAAAA GCCCGGC ATG ACCGGGC TTCTAAAAGTTACTG TERM 1209 1377659 - 1377629 - T 91 -12.6 -4.07687 | overlap 1377633 1377651 1377652 ACCGGGCTTCTAAAA GTTACTGCGTCCTC GCA GAGAACGCAGCACC TGCAAAGCGATGACT TERM 1210 1377655 - 1377633 - T 80 -14.2 -2.74605 | overlap 1377629 1377651 1377652 GGCTTCTAAAAGTTA CTGCGTCCTC GCA GAGAACGCAG CACCTGCAAAGCGAT Bphy_4352 1380391 - 1377674 - | aconitate hydratase 1 TERM 1211 1377719 - 1377704 - G 72 -8.2 -3.9712 | opp_overlap 1377704 CGAGCGCAGCACAAA CGGCAG GATA CCGCCG TGCTTGTAGTAGTCG TERM 1212 1379089 - 1379108 + g 72 -8.6 -4.0098 | gap 1, overlap 1379087 TGCACGACGTGATCG CGGCGATCA GGA TG-TCGCCG TTCTTTACGTTGACG Bphy_4353 1381893 - 1380442 - | 2-methylcitrate dehydratase Bphy_4354 1382412 - 1381918 - | hypothetical protein Bphy_4355 1383687 - 1382512 - | 2-methylcitrate synthase/citrate synthase II TERM 1213 1383602 - 1383627 + g 87 -6 -5.09426 | overlap 1383603 AGGGCCGTGTTGCCC GCCGTCACGC CCGACA GCGCGACGGA TTTTTTCGGCTTGAA Bphy_4356 1384624 - 1383713 - | methylisocitrate lyase Bphy_4357 1385643 - 1384621 - | HpcH/HpaI aldolase TERM 1214 1385797 - 1385759 - R 73 -13.2 -2.74792 | overlap 1385758 GGATCAGTTGCAAAC TTTTGCATGACGGCTTGC CAG GCAAGGCGTCATGCACGA TATCGCACGTAAAAA TERM 1215 1385846 - 1385815 - R 100 -15.2 -5.47218 | gap 1, opp_overlap 1385814 TCGCACGTAAAAAAA CCGGAAC-CCGTCGC GTC GCAACGGAGTCCCGG CTGGTCTGCATGCGG Bphy_4358 1386848 - 1385865 - | malate dehydrogenase Bphy_4359 1387295 - 1386879 - | hypothetical protein Bphy_4360 1387387 - 1388187 + | GntR family transcriptional regulator Bphy_4361 1388340 - 1388756 + | succinate dehydrogenase, cytochrome b556 subunit Bphy_4362 1388760 - 1389128 + | succinate dehydrogenase, hydrophobic membrane anchor protein TERM 1216 1389592 - 1389534 - g 80 -13.8 -3.32268 | gap 2, overlap 1389525 GAACTACGGCGAGAA GCCCGTGCAGC-GCGCGTGCGCTG-CCG CTGAC CGGACCGGCCACGCGCTGCTGCACACGC TGTACCAGCAGAACG Bphy_4363 1389133 - 1390908 + | succinate dehydrogenase, flavoprotein subunit TERM 1217 1390917 - 1390894 - f 74 -11 -3.53012 | opp_overlap 1390886 1390881 TCGGTGCCGCCCAAA GCGCGTACCT TCTA AGGCACACGC ACAAGTCAAAGGACC Bphy_4364 1390940 - 1391644 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein Bphy_4365 1391644 - 1391916 + | hypothetical protein Bphy_4366 1392007 - 1393308 + | citrate synthase I TERM 1218 1393355 - 1393388 + F 100 -24.1 -3.34398 | opp_overlap 1393359, overlap 1393359 TTAAACGCATCGAGT GAAACACCCCAACGG TTCG CCGTTGGGGTGTTTC TGTTTCGGCCGCGCG TERM 1219 1393359 - 1393384 + F 100 -19.1 -4.32857 | opp_overlap 1393359, overlap 1393355 ACGCATCGAGTGAAA CACCCCAACGG TTCG CCGTTGGGGTG TTTCTGTTTCGGCCG TERM 1220 1393384 - 1393359 - f 100 -19.1 -3.66999 | opp_overlap 1393355 1393359 ACGCATCGAGTGAAA CACCCCAACGG TTCG CCGTTGGGGTG TTTCTGTTTCGGCCG TERM 1221 1394585 - 1394548 - g 74 -11.3 -3.56568 | opp_overlap 1394548 1394559 GAAGGATCCCGTAAA GCGCGACGCAATGGAGC GCGC GCTGCATTACATGGCGC TCGAACCGAACCTGC TERM 1222 1394948 - 1394985 + G 77 -11.1 -3.74747 | overlap 1394949 CGCACGCACCTCGTC AGCCCCGCGATGGCAGC GGCT GCCGCCATCGAAGGGCA TTTCGTCGACATTCG TERM 1223 1394949 - 1394984 + G 77 -14.6 -2.84527 | overlap 1394948 GCACGCACCTCGTCA GCCCCGCGATGGCAGC GGCT GCCGCCATCGAAGGGC ATTTCGTCGACATTC Bphy_4367 1393604 - 1395013 + | 3-isopropylmalate dehydratase, large subunit Bphy_4368 1395262 - 1395915 + | 3-isopropylmalate dehydratase, small subunit Bphy_4369 1395981 - 1397048 + | 3-isopropylmalate dehydrogenase TERM 1224 1397107 - 1397067 - f 75 -9 -4.00868 | opp_overlap 1397077, overlap 1397068 GCATTTAGAAGCAAA CGTGCGTGAATCGGCCCT GTTTG AGGGCTGATTCATGCAAA TCGCGGCGCACGCGC TERM 1225 1397275 - 1397256 - f 71 -7.2 -4.12188 | gap 1 CGATTACCCCGAAAA CGATCA-CG AAG CGCTGATCG TCCGTCGTGCCCGCT Bphy_4370 1397357 - 1398478 + | aspartate-semialdehyde dehydrogenase TERM 1226 1398545 - 1398526 - f 90 -10.6 -4.66264 | opp_overlap 1398526 CAAAACTTCCAAAAA GCGTCGCG ATTT CGCGGCGC TTTTTTATTGTGCAT TERM 1227 1398526 - 1398545 + F 100 -12.8 -5.56673 | opp_overlap 1398526 CAAAACTTCCAAAAA GCGTCGCG ATTT CGCGGCGC TTTTTTATTGTGCAT TERM 1228 1399233 - 1399283 + G 73 -9.5 -3.87815 | gap 2 CGAGTGCCCCCGCGA CGCCCGAAGGCGGGTCTACGCCGGC AGC GGCGGCGCAG-CCCGCGAGCGG-CG TTTCTGCGCCTGCGG TERM 1229 1400923 - 1400944 + G 74 -12.9 -3.2614 | opp_overlap 1400914, overlap 1400933 1400935 ATCGAACGATGCCGA CACGCGCGC CGAC GCGCGCGCG TTGCTGTCGACACTC Bphy_4371 1398623 - 1400974 + | hypothetical protein TERM 1230 1401192 - 1401216 + G 79 -6.3 -4.62069 | overlap 1401193 1401194 GGATCGCGCCGAATT TTCGTGGGTGC GCG GCACCAACGCG TTTTTGCCGTCGACG Bphy_4372 1400974 - 1401777 + | tRNA pseudouridine synthase A TERM 1231 1401894 - 1401920 + G 80 -8.6 -4.37092 | overlap 1401896 GCCCATGCCATCGAT CTCGGCGCCGAT GCG ATCGGCCTCGTG TTTTATCCGCCGAGT TERM 1232 1401896 - 1401918 + G 71 -9.8 -3.79419 | overlap 1401894 CCATGCCATCGATCT CGGCGCCGAT GCG ATCGGCCTCG TGTTTTATCCGCCGA Bphy_4373 1401774 - 1402481 + | phosphoribosylanthranilate isomerase TERM 1233 1402962 - 1402984 + G 72 -11.2 -3.55444 | opp_overlap 1402962 CATGGGCGCGGAAGA CGTGCGCCGT CAG GCGGCGAACG TTTACCGCATGAAAC TERM 1234 1403345 - 1403302 - g 71 -10.2 -3.56099 | gap 1, overlap 1403303 1403306 1403341 GATAAGTCGGTGAAA CTGATCGGCGTCGAAGCCGCC GGC GACGGCATCGACACAGGTC-G ACACGCGGCCTCGCT Bphy_4374 1402540 - 1403733 + | tryptophan synthase, beta subunit TERM 1235 1404438 - 1404416 - g 76 -9.1 -4.1899 | overlap 1404417 CCATCCGACCCAAAA GCCGCTCGA AATCG TCGAGCGGA TGGTCCTGGCGAGCT Bphy_4375 1403745 - 1404662 + | DNA methylase N-4/N-6 domain-containing protein Bphy_4376 1404695 - 1405510 + | tryptophan synthase, alpha subunit TERM 1236 1406343 - 1406322 - g 71 -7.3 -4.07885 | gap 1 GACCGTGCGTGAAAA GCTGCCGGAA GGC TTCCAGC-GC GCAGAGTTCCTGTTG TERM 1237 1406388 - 1406428 + G 78 -13.9 -3.28712 | opp_overlap 1406368 1406364 1406381 1406410, overlap 1406389 CGACATGATCGTCGA CCGTCGCAAGCTGCGCGAG GAA CTCGCGCAGCTGATGGCGC TTCTGACGCGCCAGC TERM 1238 1406389 - 1406427 + G 83 -17.4 -2.57132 | opp_overlap 1406368 1406364 1406381 1406410, overlap 1406388 GACATGATCGTCGAC CGTCGCAAGCTGCGCGAG GAA CTCGCGCAGCTGATGGCG CTTCTGACGCGCCAG Bphy_4377 1405591 - 1406463 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit TERM 1239 1406511 - 1406551 + F 81 -11 -3.91032 | opp_overlap 1406512 1406514, overlap 1406514 1406517 CGGCGAGTCGGAAAA AGCCAACGCGCCGCCAGA GGTAA TCAAGCGGCGCGTTGTCA TTTCTAGGATAATTC TERM 1240 1406550 - 1406512 - f 100 -16.7 -4.59773 | opp_overlap 1406511 1406514 1406517, overlap 1406514 GGCGAGTCGGAAAAA GCCAACGCGCCGCCAGA GGTAA TCAAGCGGCGCGTTGTC ATTTCTAGGATAATT TERM 1241 1406514 - 1406548 + F 88 -15.7 -3.01918 | opp_overlap 1406514 1406512, overlap 1406511 1406517 CGAGTCGGAAAAAGC CAACGCGCCGCCAGA GGTAA TCAAGCGGCGCGTTG TCATTTCTAGGATAA TERM 1242 1406548 - 1406514 - f 87 -17.9 -2.61004 | opp_overlap 1406511 1406514 1406517, overlap 1406512 CGAGTCGGAAAAAGC CAACGCGCCGCCAGA GGTAA TCAAGCGGCGCGTTG TCATTTCTAGGATAA TERM 1243 1406517 - 1406545 + F 78 -11.6 -3.64915 | opp_overlap 1406514 1406512, overlap 1406514 1406511 GTCGGAAAAAGCCAA CGCGCCGCCAGA GGTAA TCAAGCGGCGCG TTGTCATTTCTAGGA Bphy_4378 1406591 - 1407901 + | FolC bifunctional protein TERM 1244 1408117 - 1408099 - g 71 -8.1 -4.07885 | opp_overlap 1408116, overlap 1408102 GACGCTTCCTGAAAA GCAGCGT GCACG ACGCCGC CTCGTCGGCGCGATC TERM 1245 1408116 - 1408172 + G 70 -14.4 -2.53876 | opp_overlap 1408099 1408102, overlap 1408117 1408120 1408161 AGCGTGCACGACGCC GCCTCGTCGGCGCGATCGCGATGGTG ATCGC CGCCGTCGTGATTCTGCCGATGGTGC TGGATTCGCATCCGA TERM 1246 1408120 - 1408154 + G 73 -14.3 -2.83271 | gap 1, opp_overlap 1408102, overlap 1408117 1408116 TGCACGACGCCGCCT CGTCGGCG-CGATCGC GATG GTGATCGCCGCCGTCG TGATTCTGCCGATGG Bphy_4379 1407929 - 1408849 + | sporulation domain-containing protein TERM 1247 1408907 - 1408928 + G 84 -6.5 -4.83615 | gap 1, overlap 1408895 1408894 GATCGGGCTGTCGGC GCTGCG-CGG CGG CTGGCGCGGC TTTTTGTCCGAAGTG Bphy_4380 1408857 - 1409351 + | colicin V production protein Bphy_4381 1409487 - 1411037 + | amidophosphoribosyltransferase TERM 1248 1411088 - 1411114 + F 100 -10.9 -5.80364 | gap 1, opp_overlap 1411088, overlap 1411076 TTTCGCGCTCACGAA GCCCGCTTATGC CGAC GCA-GAGCGGGC TTTTTTTATTGCGCT Bphy_4382 1411164 - 1412348 + | O-succinylhomoserine sulfhydrylase Bphy_4383 1413284 - 1412511 - | AraC family transcriptional regulator Bphy_4384 1413654 - 1413316 - | peptidylprolyl isomerase FKBP-type TERM 1249 1413862 - 1413880 + G 75 -10.2 -3.86897 | opp_overlap 1413852, overlap 1413864 GCGAACCGCGCGACG CAGCGCCG AAA CGGCGCTC TTTATGCGCGATCAC TERM 1250 1413864 - 1413878 + G 78 -12.8 -3.5241 | overlap 1413862 GAACCGCGCGACGCA GCGCCG AAA CGGCGC TCTTTATGCGCGATC TERM 1251 1414075 - 1414122 + G 70 -14.2 -2.56596 | opp_overlap 1414083 1414087, overlap 1414071 CGTCGATACGACGCG CGCAGAGACGAA-GGCGCTCGC GTTGAA GCGCGCGCCGTTCG-CGCTGCG TCCATTGCTCGACGA TERM 1252 1414110 - 1414087 - g 70 -10.9 -3.32022 | opp_overlap 1414075 1414071, overlap 1414083 GCGCGCAGAGACGAA GGCGCTCGC GTTGAA GCGCGCGCC GTTCGCGCTGCGTCC Bphy_4385 1413779 - 1414579 + | histidine kinase TERM 1253 1414631 - 1414594 - f 78 -11.1 -3.64466 | opp_overlap 1414605 AGCGCACACATAGAA GCGCGCGTGGCCTGGCC GCAT GGCCAGTTCATGTGCGC ACATCGCTTTCGCGT TERM 1254 1414732 - 1414747 + G 74 -5.4 -4.55295 | overlap 1414733 TTGGCGCGTTGTTCC TCGTTG CGCT CAACGG TTTCTTTGTCGCCGC TERM 1255 1415341 - 1415356 + G 74 -4.6 -4.58395 | opp_overlap 1415327 1415341 ACGAATGGAACACCA TCGCGC ATTC GCTCGA TTTTTCGCGCATGAC TERM 1256 1415622 - 1415642 + G 78 -13.3 -3.53012 | AAGCCCGACATGCCC GCGCTGGAA CTC TTCCGGCGC TTTCGCAAGGGCGCG Bphy_4386 1414695 - 1416038 + | hypothetical protein Bphy_4387 1418876 - 1416042 - | malto-oligosyltrehalose synthase TERM 1257 1416310 - 1416336 + g 86 -14.5 -3.46068 | gap 1, overlap 1416310 CAGTTGCCCTGACGC CGCGCGAACGCG ATCG CGCGTT-GCGCG TGTTTGCCTTGCACC TERM 1258 1416310 - 1416338 + g 84 -13.2 -3.75332 | gap 1, overlap 1416310 CAGTTGCCCTGACGC CGCGCG-AACGCG ATCG CGCGTTGCGCGTG TTTGCCTTGCACCGT Bphy_4388 1421053 - 1418873 - | 4-alpha-glucanotransferase TERM 1259 1420936 - 1420960 + g 75 -4.2 -4.59773 | gap 1, overlap 1420916 1420937 GCTCGAGCAGTACGG C-GAGCGTGCT GTCG GGCACGCGCTG TTTTTCGCGATGCGC Bphy_4389 1422969 - 1421059 - | malto-oligosyltrehalose trehalohydrolase TERM 1260 1421517 - 1421527 + g 77 -8.2 -4.25104 | TTGGATCGGGGATCA GCGC GCG GCGC TTTTCGTCGGCAAAC TERM 1261 1421744 - 1421727 - G 71 -9.1 -3.72576 | CGTCGTCGGAGCAAA GCGAGCG CAGA CGCTCAC CCATTGCGCGATTGC TERM 1262 1422351 - 1422337 - G 70 -7.8 -3.95787 | GACGACATCGAGAAA CACGGC TAG ACCGTG ACCGTGCGCGGCGTC Bphy_4390 1425269 - 1423056 - | glycogen debranching enzyme GlgX TERM 1263 1425099 - 1425119 + g 70 -5.3 -4.33785 | overlap 1425100 1425101 1425104 TTCGTCGGTGCATTC GGGAAGCGC ATA GCGCTTCAG TTCTTTTCTGCCTGT Bphy_4391 1427758 - 1425533 - | 1,4-alpha-glucan branching enzyme TERM 1264 1425844 - 1425874 + g 72 -13.2 -3.15544 | TCCACTCGAACCCGC CCGGCTCAGTATCG AGA CGATGCAGCGCCGG TTCCTCACGATACAA Bphy_4392 1431209 - 1427751 - | trehalose synthase TERM 1265 1430623 - 1430602 - G 81 -10.9 -3.96148 | gap 1, opp_overlap 1430608 TGGTGCGAGTAGAAA CGGTGCCAGT AGT ACTGGC-CCG CGACGGGATCGTGCG Bphy_4393 1434653 - 1431219 - | alpha amylase catalytic region TERM 1266 1434088 - 1434063 - G 81 -12.6 -3.85698 | gap 1 CGTGGCGGCGAGAAA GCGCGTCGACG GATGG CG-CGACGCGC GCACGGCATCCAGCA Bphy_4394 1435844 - 1435194 - | hypothetical protein Bphy_4396 1436919 - 1437656 + | metallophosphoesterase Bphy_4397 1438370 - 1437669 - | RES domain-containing protein Bphy_4398 1438804 - 1438367 - | hypothetical protein TERM 1267 1438584 - 1438561 - G 81 -9.6 -4.27192 | gap 1, opp_overlap 1438574 1438581, overlap 1438565 AAATGCCCAGCAAAA GCGACA-GCCG CTC CAGCGTGTCGC GGCTGAGGCGCGCAG Bphy_4399 1438885 - 1439319 + | hypothetical protein Bphy_4400 1440187 - 1439336 - | LysR family transcriptional regulator Bphy_4401 1440286 - 1440669 + | 4-oxalocrotonate tautomerase Bphy_4402 1440762 - 1441592 + | ModE family transcriptional regulator Bphy_4403 1442333 - 1441632 - | ABC transporter related TERM 1268 1441873 - 1441833 - G 75 -11.8 -3.50572 | gap 1, overlap 1441834 ATCGAGCGCAGAGAA CGGCTCGTCGAGCAGCAGC AGGC GCGGCTGCGCGACCAGC-G CCCGCGCCAGCGCCA Bphy_4404 1443009 - 1442335 - | molybdate ABC transporter, inner membrane subunit TERM 1269 1442572 - 1442554 - G 71 -10.2 -3.57462 | GAGCGCACGTGCAAA CGCGAGCA GCG CGCCCGCG AGAATGCCGCGCGAC TERM 1270 1442597 - 1442577 - G 71 -12.5 -3.28712 | GCGCGCCCGCGAGAA TGCCGCGCG ACG CGAGCGGCA GCGTCACGCGAAAGA TERM 1271 1442731 - 1442713 - G 71 -10.2 -3.62572 | CAGCACGAGCGGAAA CGCGACGA CCA TCGACGCG ATCACCGCGCCTTGC Bphy_4405 1443802 - 1443023 - | molybdenum ABC transporter, periplasmic molybdate-binding protein Bphy_4406 1444650 - 1443919 - | phosphoesterase PA-phosphatase related TERM 1272 1446070 - 1446091 + G 86 -12.9 -3.85698 | opp_overlap 1446067 TTCCGGCACCAACGC CGGGCCGAG TCGG CGCGGCCCG TTTCTCGCACCGCGG Bphy_4407 1444936 - 1446132 + | PHB depolymerase family esterase Bphy_4408 1446239 - 1446415 + | hypothetical protein TERM 1273 1446482 - 1446505 + T 83 -9.5 -4.28254 | opp_overlap 1446475 GCGCAACACGCCATA GCGCGCCAG AGTTTG CTGTCGCGC TTTTGCATGTTCGAC Bphy_4409 1447972 - 1446458 - | deoxyribodipyrimidine photo-lyase TERM 1274 1448104 - 1448062 - R 100 -25.1 -4.68424 | gap 1, opp_overlap 1448066, overlap 1448066 1448091 GAACCGACGCAAAAA TGAAGCAGCGCCCGCCTTTC GCGC GAAAGGCGGGCGCTGCC-CA AGAAGGAACGCAAGT TERM 1275 1448101 - 1448066 - R 100 -29.2 -3.83042 | opp_overlap 1448066, overlap 1448062 1448091 CGACGCAAAAATGAA GCAGCGCCCGCCTTTC GCGC GAAAGGCGGGCGCTGC CCAAGAAGGAACGCA Bphy_4410 1448857 - 1448327 - | MarR family transcriptional regulator TERM 1276 1448909 - 1448884 - R 76 -13.2 -3.16564 | overlap 1448845 1448844 1448843 CTCGTAGCGCACGAA GCCCGCGCCG CTTGCC CGGCGCGGGT TCAACCGGCATAGCC Bphy_4411 1449751 - 1448936 - | putative transmembrane protein Bphy_4412 1450736 - 1449765 - | homoserine kinase TERM 1277 1450835 - 1450873 + r 73 -12.3 -3.08464 | gap 1, opp_overlap 1450839 CGCTTGGGGTCGACG CAAAGCCGGCGCG-CGTC CTGC GACGGCGCGCCGGCCCGG TTGGATCAGTAATGC TERM 1278 1450869 - 1450839 - R 100 -20.5 -3.64703 | gap 1, opp_overlap 1450835 TGGGGTCGACGCAAA GCCGGCGCG-CGTC CTGC GACGGCGCGCCGGC CCGGTTGGATCAGTA Bphy_4413 1451283 - 1450879 - | hypothetical protein Bphy_4414 1451474 - 1453030 + | AMP nucleosidase Bphy_4415 1453574 - 1453044 - | chromate transporter Bphy_4416 1454179 - 1453571 - | chromate transporter Bphy_4417 1454278 - 1455201 + | LysR family transcriptional regulator Bphy_4418 1455935 - 1455192 - | hypothetical protein TERM 1279 1457639 - 1457662 + G 70 -2.3 -4.63218 | overlap 1457640 GCGAATTCAATCTCG GCTCGCCGA AGCAGA TCGGCCAGA TTTTCTTCGAGAAGC TERM 1280 1458324 - 1458311 - g 71 -9.5 -3.72985 | overlap 1458309 CATACATGGAAAACA CGCGC ACCA GCGCG AAAATGAAGGGCTAC Bphy_4419 1455937 - 1458684 + | DNA polymerase I TERM 1281 1458882 - 1458855 - f 90 -6.3 -5.24003 | overlap 1458857 AATAAAAACCAAAAA GCGGC-CGCACTC GCGC GA-CGCGTGCCGC ATCGACGCACAACTT Bphy_4420 1458922 - 1460268 + | NADH dehydrogenase TERM 1282 1460285 - 1460319 + F 87 -15.1 -3.37612 | opp_overlap 1460292, overlap 1460286 CGATTTCGATGCTTC TGCAACAGGATGCGC TTTGC GCGTATCCTGTTGCC TTCCTTGCCGTTCAC TERM 1283 1460286 - 1460318 + F 95 -18.6 -2.62246 | opp_overlap 1460292, overlap 1460285 GATTTCGATGCTTCT GCAACAGGATGCGC TTTGC GCGTATCCTGTTGC CTTCCTTGCCGTTCA TERM 1284 1461097 - 1461138 + G 85 -4.9 -5.06103 | opp_overlap 1461069, overlap 1461096 1461092 GGCCCGCAAGCGGGC CGCGGGTCGCGGTTCGTCG TGTA TGACGATGCGGGGCATGCG TTTTTTGCCGATTAT Bphy_4421 1460362 - 1461234 + | carboxymethylenebutenolidase TERM 1285 1462030 - 1461991 - g 76 -14.2 -3.13403 | opp_overlap 1462014, overlap 1461999 CGGCGCTCAGGAAGA TCGATGAAGCCGTCGCCG AAGG CCGCGACGGCGTCGCCGA GGACGTCGCGTTTCA TERM 1286 1462022 - 1461999 - g 78 -13.8 -3.22448 | opp_overlap 1462014, overlap 1461991 AGGAAGATCGATGAA GCCGTCGCCG AAGG CCGCGACGGC GTCGCCGAGGACGTC TERM 1287 1462014 - 1462040 + G 80 -12.2 -3.73072 | opp_overlap 1461999 1461991 GCCGTCGCCGAAGGC CGCGACGGCGTC GCC GAGGACGTCGCG TTTCATCGCGCGATT Bphy_4422 1461597 - 1462301 + | GntR domain-containing protein Bphy_4423 1462351 - 1463241 + | 3-hydroxyisobutyrate dehydrogenase Bphy_4424 1463261 - 1464580 + | type III effector Hrp-dependent outers Bphy_4425 1464577 - 1465233 + | class II aldolase/adducin family protein TERM 1288 1465286 - 1465269 - f 72 -4.8 -4.67353 | overlap 1465257 CCACCCAGGCAAAAA GCCGGA GGACCG TCCGAC ATGAAACGGATGTTC TERM 1289 1466061 - 1466035 - g 77 -8.6 -4.30719 | overlap 1466051 GCGCGCGAGAAGAAA CTGCTCGCCGAC GAA ATCGCCGCGCAG CCGCAAGAAAAGACG Bphy_4426 1465333 - 1466670 + | major facilitator transporter Bphy_4427 1466695 - 1467483 + | hydroxypyruvate isomerase TERM 1290 1467868 - 1467888 + G 71 -13.9 -2.74371 | overlap 1467865 TCGATGTCTGCCGGG CGCGCGGGC ATC GGCCGCGCG TCGTGTTCACGAGTT TERM 1291 1468455 - 1468475 + G 79 -11.1 -3.85698 | CAGGGCGACGCGTCG TTCGCGGAC ATC GTCCGCGCA TTTATCGACGACGAA Bphy_4428 1467528 - 1468517 + | NAD-dependent epimerase/dehydratase Bphy_4429 1470127 - 1468766 - | major facilitator transporter TERM 1292 1468858 - 1468813 - G 93 -19.7 -2.89564 | gap 1 TCGCGATCCCATACA GCGC-CGCACTGACCAGCGCCG ATG CGCCGCCGACCAGCGCGAGCGC GGCGCCGAGACTCGA TERM 1293 1469109 - 1469062 - G 77 -12 -3.56643 | gap 1, overlap 1469063 1469065 CGCAGATGCCGTAAA GCACGATCGCGACGGCGCT-GTC GCC GACGAGCGGCATCGCGATTGCGG CGGGTACCAGCAACG TERM 1294 1469108 - 1469063 - G 78 -15.5 -2.73771 | gap 1, overlap 1469062 1469065 GCAGATGCCGTAAAG CACGATCGCGACGGCGCT-GTC GCC GACGAGCGGCATCGCGATTGCG GCGGGTACCAGCAAC TERM 1295 1469106 - 1469065 - G 77 -14.5 -2.91322 | gap 1, overlap 1469063 1469062 AGATGCCGTAAAGCA CGATCGCGACGGCGCT-GTC GCC GACGAGCGGCATCGCGATTG CGGCGGGTACCAGCA Bphy_4430 1471180 - 1470164 - | succinylglutamate desuccinylase/aspartoacylase TERM 1296 1471199 - 1471213 + r 81 -11.4 -3.88438 | opp_overlap 1471198 1471196 1471199, overlap 1471202 GCGATCCGTAAAGAG CGAGGC AGC GCCTCG TTGTCTTTACTATCG TERM 1297 1471245 - 1471256 + r 74 -7.2 -4.36914 | CGACGATAAAACGTC CGGC CAAT GCCG TTTTCTGCGGCAGCA Bphy_4431 1472184 - 1471309 - | LysR family transcriptional regulator TERM 1298 1471945 - 1471913 - G 70 -14.1 -2.62983 | overlap 1471932 CCGATGCGCAGATGA CCTCGCACGCCCGAT GCA ATGCGGCGCGCGAGG CGGTTCGCGGCATCG TERM 1299 1472227 - 1472280 + r 100 -15.4 -3.889 | gap 1, opp_overlap 1472233 1472234, overlap 1472238 TCTACGTGCTGTGCG GTTAAAGCGAAGCGTTCGCCGCCTG GGCCG CATGCGGCGAACGCTTCG-TAGGAC TTTCGTCTGATTGCA TERM 1300 1472275 - 1472233 - R 100 -22.1 -3.53012 | opp_overlap 1472227 1472238, overlap 1472234 TGCTGTGCGGTTAAA GCGAAGCGTTCGCCGCCTG GGCCG CATGCGGCGAACGCTTCGT AGGACTTTCGTCTGA TERM 1301 1472274 - 1472234 - R 100 -25.6 -2.71712 | opp_overlap 1472227 1472238, overlap 1472233 GCTGTGCGGTTAAAG CGAAGCGTTCGCCGCCTG GGCCG CATGCGGCGAACGCTTCG TAGGACTTTCGTCTG TERM 1302 1472238 - 1472270 + r 100 -19.2 -3.17714 | opp_overlap 1472234 1472233, overlap 1472227 TGCGGTTAAAGCGAA GCGTTCGCCGCCTG GGCCG CATGCGGCGAACGC TTCGTAGGACTTTCG Bphy_4432 1473594 - 1472302 - | hypothetical protein Bphy_4433 1474419 - 1473745 - | Crp/FNR family transcriptional regulator Bphy_4434 1475139 - 1474663 - | UspA domain-containing protein TERM 1303 1475566 - 1475534 - g 72 -11.2 -3.47322 | opp_overlap 1475559 GGCGAGTACAAGGAA GGCGAGCGTTTGCC GACCG AGCATGCGCTCGCC GAGCGTTTCGAGACG Bphy_4435 1475450 - 1476139 + | GntR domain-containing protein TERM 1304 1476614 - 1476624 + G 77 -5.4 -4.59773 | overlap 1476601 1476600 CACGGCGTTCGCGTC GATC CCC GATC TTTTTCCCGATCCGC TERM 1305 1477274 - 1477318 + G 76 -14.2 -3.052 | gap 1 CTTCAGCCTGCTCGT CGCGGCGTCGGTCGGCCTCGC GCTT GCGACGCCCGC-GACGCCGCA TCTGTATCTCGAACT Bphy_4436 1476285 - 1477793 + | major facilitator transporter Bphy_4437 1478414 - 1477827 - | autoinducer synthesis protein TERM 1306 1478496 - 1478475 - H 100 -5.1 -5.93809 | TGCGGATAAAAAAAA CACCTACTC ACCT GGATAGGTG GCGTTTGTGTCTGAA Bphy_4438 1478556 - 1478888 + | hypothetical protein Bphy_4439 1479576 - 1478872 - | LuxR family transcriptional regulator Bphy_4440 1480064 - 1480351 + | hypothetical protein TERM 1307 1481860 - 1481894 + G 85 -7.9 -4.65078 | GCCACTTCCGATCCG CGCGCGA-CGTCAGTCG GCG CGA-TGGCGATCGAGCG TTTTCTTCGGCCTGT Bphy_4441 1480432 - 1482012 + | aldehyde dehydrogenase TERM 1308 1482121 - 1482080 - f 100 -24 -2.91199 | gap 1, opp_overlap 1482086, overlap 1482084 1482086 TAACCGGCAACGACA GCAATACGCCGGACGTCGA TCGCT TCGACGTCCGGCGT-TTGC ACCGACAGCGCCATG TERM 1309 1482118 - 1482084 - f 100 -20.1 -3.32647 | opp_overlap 1482086, overlap 1482080 1482086 CGGCAACGACAGCAA TACGCCGGACGTCGA TCGCT TCGACGTCCGGCGTT TGCACCGACAGCGCC TERM 1310 1482116 - 1482086 - f 100 -22.7 -3.22858 | opp_overlap 1482086, overlap 1482084 1482080 GCAACGACAGCAATA CGCCGGACGTCGA TCGCT TCGACGTCCGGCG TTTGCACCGACAGCG TERM 1311 1482086 - 1482116 + F 100 -22.7 -3.53012 | opp_overlap 1482086 1482084 1482080 GCAACGACAGCAATA CGCCGGACGTCGA TCGCT TCGACGTCCGGCG TTTGCACCGACAGCG Bphy_4442 1482134 - 1483084 + | gluconolactonase TERM 1312 1484260 - 1484250 - g 79 -2.4 -5.07652 | CGTGCCAAAAGAAAA GCTC GAC GTGC TCTACAAGCTGATGA TERM 1313 1484457 - 1484425 - g 70 -6.2 -4.28254 | gap 1 CCGGAATACGCAAAA CTGCTGGCCGACCGT CCGC ACGTTCAGCC-GCTG AACGCAGCGGCCATG Bphy_4443 1483348 - 1484526 + | extracellular solute-binding protein Bphy_4444 1484676 - 1485755 + | ABC transporter related TERM 1314 1485802 - 1485835 + G 75 -12.5 -3.54158 | gap 1, overlap 1485760 1485776 1485773 1485799 CGCCGCGCCGCGCGA CGGCAAGGCGTGGC TCGTGTC GCC-CGCCTTGCTG TTCATTCTTGCGCTG Bphy_4445 1485752 - 1486639 + | binding-protein-dependent transport systems inner membrane component TERM 1315 1486985 - 1487015 + G 71 -10.5 -3.58522 | gap 1 TGCCCGCCGCGTATG CGCTTGCGCGCG TGCAGTTC CGCG-GCAAGCG TTTCGCGATGCTCGT Bphy_4446 1486639 - 1487544 + | binding-protein-dependent transport systems inner membrane component Bphy_4447 1487554 - 1489314 + | dihydroxy-acid dehydratase Bphy_4448 1489994 - 1489389 - | short-chain dehydrogenase/reductase SDR TERM 1316 1490113 - 1490162 + r 75 -12.3 -3.17571 | opp_overlap 1490139 GCACGTATGAGCGAT CGGTGCGGTC-TGTGACACGTCG AGAAGA CGACGCGTCACATGACCA-ACCG TTCACTTCAACCGTT Bphy_4449 1490613 - 1490164 - | hypothetical protein TERM 1317 1490475 - 1490497 + g 77 -11.2 -3.78034 | overlap 1490471 1490470 CGATCGGCGCATGGC CCGCGATGCG CGC CGCTTCGTGG TTCTTACTGTCGGTA Bphy_4450 1490900 - 1491133 + | hypothetical protein TERM 1318 1491442 - 1491452 + G 72 -8.2 -4.07687 | opp_overlap 1491429, overlap 1491430 CATCGTCGCGGGACT GCGC GCA GCGC TTTTCCCGACGCACT TERM 1319 1491636 - 1491586 - g 88 -17.7 -3.01712 | gap 1, opp_overlap 1491632, overlap 1491617 CTTCTTGCCCGAACA CGCGCAGACGTCGGACGCGGATCT GAGC AAACGCGCGTTCGACGT-TGCGCG CGAGTTCGGCAAGCA TERM 1320 1491632 - 1491669 + G 81 -11.9 -3.84246 | opp_overlap 1491586 1491617 CGCGCGTTCGACGTT GCGCGCGAGTTCGGCAA GCAG TTGCCGGGCATACGCGC TTTGCTGGTTAGCGA Bphy_4451 1491293 - 1492225 + | Serine O-acetyltransferase Bphy_4452 1492263 - 1493090 + | AraC family transcriptional regulator Bphy_4453 1493191 - 1494081 + | hypothetical protein TERM 1321 1494120 - 1494152 + T 72 -5.4 -4.41348 | overlap 1494124 GTCTGCTTCTGGTTT GCTGGTGTTGCCCC TGTGC GGGGCGGCACTTAC TTTCTTTGCCGCGGC TERM 1322 1494124 - 1494148 + T 78 -11.4 -3.75884 | overlap 1494120 GCTTCTGGTTTGCTG GTGTTGCCCC TGTGC GGGGCGGCAC TTACTTTCTTTGCCG TERM 1323 1494713 - 1494681 - T 76 -4.6 -4.86731 | overlap 1494684 CCGCGGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACGCCAGC AAACCAGAAGCAGAC Bphy_4454 1495486 - 1494857 - | GTP cyclohydrolase I TERM 1324 1495368 - 1495328 - G 71 -4.5 -4.57569 | overlap 1495330 GTAGCCCGCGAAAAA TTCTTCATACGCCCGCACG ACG CGCGCCGGCGTGTCGAGCA GCCCCTCGCGCTGAG Bphy_4455 1496515 - 1495592 - | LysR family transcriptional regulator TERM 1325 1495854 - 1495871 + g 80 -4.7 -4.84359 | overlap 1495849 GGTGTCTCGAGCACG GCGCGAC GCCG GATGCGC TTTTTCTCCAGATAC TERM 1326 1496228 - 1496275 + g 77 -4.9 -4.65895 | gap 2, overlap 1496232 CAGCGCGAGCGAAAA GGTCTGCGTCGTGGTCGCGGGAT CGAA GTCCTGCGATT-CGA-GCATGCC TTTTTCGATGCGCGC Bphy_4456 1496664 - 1497842 + | 4-hydroxybenzoate 3-monooxygenase TERM 1327 1498193 - 1498231 + G 86 -14.5 -3.53012 | CTCCACTCGGCAGTT GCCGACGTGCATGACGG CGCGA CCGTCATGATCGGCGGC TTTGGCACGGCGGGC TERM 1328 1498328 - 1498315 - g 75 -9.5 -3.95324 | CATCGTGAACAACAA CGCCG GCAA CGGCG ACACGGGCCTCGCCG Bphy_4457 1498154 - 1498855 + | 3-oxoacid CoA-transferase, A subunit Bphy_4458 1498867 - 1499526 + | 3-oxoacid CoA-transferase, B subunit TERM 1329 1499562 - 1499601 + F 100 -20 -2.87132 | gap 1, opp_overlap 1499529 1499548 TGCGCGCGTGACCTC GC-CGCGGCGTTCGGCGAC AAT GGAGCCGAACGCCGCGCGC TCTCTGCGCGAACCC TERM 1330 1500357 - 1500369 + G 85 -7.7 -4.60487 | overlap 1500348 1500355 GCGTGATCGCATCGC CGAAG CGG CTTCG TTTTTCGGCATGCTG TERM 1331 1500521 - 1500501 - g 84 -14.7 -3.30441 | GACCATGCCGCACAA GCGCAACCC GGT GGGCTGCGC GGCCGTGCTGACAGC Bphy_4459 1499581 - 1501011 + | 3-carboxy-cis,cis-muconate cycloisomerase Bphy_4460 1501033 - 1501824 + | 3-oxoadipate enol-lactonase Bphy_4461 1501821 - 1502207 + | 4-carboxymuconolactone decarboxylase TERM 1332 1502208 - 1502220 + F 83 -4.7 -5.13016 | overlap 1502198 GACCAGGGCGCCTAA CGGCG GCG CGCGG TTTTTGCTTTTGCTT Bphy_4462 1502461 - 1504362 + | inner-membrane translocator Bphy_4463 1504359 - 1505156 + | ABC transporter related TERM 1333 1505366 - 1505349 - g 72 -12.7 -3.05844 | opp_overlap 1505317 CGGTCCACTTCAACA GCGCGGA TATC TCCGCGC TGCCGCCGCATCGCA Bphy_4464 1505153 - 1505866 + | ABC transporter related TERM 1334 1505944 - 1505917 - f 78 -8.4 -4.11484 | gap 1, overlap 1505907 GGCAAGCGCGCAAAA CTCCGGTACGATG CAG CACCGT-CCGGCG GCCCGCGCCGCCGCA TERM 1335 1506509 - 1506499 - g 100 -8.2 -5.10208 | opp_overlap 1506499 1506496 GAAGCTGAAGAAAAA GCGC TGG GCGC TCGTATATCCCAACT TERM 1336 1506988 - 1506976 - g 84 -6.9 -4.74801 | overlap 1506978 GAATGGCATCAAAAA GGCCG GTT CGACC GATCCCGACAAGCTC Bphy_4465 1505990 - 1507210 + | extracellular ligand-binding receptor TERM 1337 1507234 - 1507254 + T 100 -14 -5.28481 | opp_overlap 1507234 CGACGCAGATCAGAA GGCCAGCC AGCGC GGCTGGCC TTTTTTCATTGCGTG TERM 1338 1507254 - 1507234 - T 87 -14.7 -3.47573 | opp_overlap 1507234 CGACGCAGATCAGAA GGCCAGCCA GCG CGGCTGGCC TTTTTTCATTGCGTG Bphy_4466 1507528 - 1507277 - | hypothetical protein TERM 1339 1507992 - 1507965 - g 81 -11.3 -3.96148 | gap 1 GCGGGGCAGCAGAAA TCGCCTGCCGCG AAGCG CACGGC-GGCGA AGAAGGCTGTCGCGA Bphy_4467 1507698 - 1508279 + | hypothetical protein TERM 1340 1508350 - 1508319 - T 100 -15.1 -5.48825 | opp_overlap 1508344 1508345, overlap 1508306 1508320 GAGCAGGCAAAAAAA TGCCGCTGCGCAC GGTATT GCGCGCAGCGGCG TGTGACGCACGTCGC TERM 1341 1508349 - 1508320 - T 100 -18.6 -3.8821 | opp_overlap 1508344 1508345, overlap 1508306 1508319 AGCAGGCAAAAAAAT GCCGCTGCGCAC GGTATT GCGCGCAGCGGC GTGTGACGCACGTCG Bphy_4468 1509695 - 1508367 - | aminotransferase class-III TERM 1342 1509045 - 1509009 - G 77 -12.9 -3.33696 | overlap 1509012 TTGCGGCGGAATTAA CACGCCCGTCGAGCCCG CTA CGGGTTCGACGATCACG GCGGCGATCGTCGAT TERM 1343 1511047 - 1511059 + G 70 -6.2 -4.21773 | overlap 1511044 CGAAGCGTTTCACCG GCCG CGCGC CGGC TTGTTTCTGTTGGCC Bphy_4469 1509851 - 1511260 + | transcriptional regulator Bphy_4470 1511471 - 1511280 - | hypothetical protein TERM 1344 1511632 - 1511605 - R 83 -14.8 -3.05384 | opp_overlap 1511595 1511625 TGTCCGCTCACGCAA CGAGCGCCTTCG TTGC CGATGGCGCCCG GCTCGCGCGGCTGCG Bphy_4471 1513114 - 1511597 - | diguanylate cyclase TERM 1345 1513189 - 1513166 - R 93 -13.2 -4.37886 | gap 1, opp_overlap 1513163 CGACCGTTTATAAAA GACAGCGCGCG TGC CGC-CGCTGTC ACCATTGCTGCATCC Bphy_4472 1514461 - 1513331 - | diguanylate cyclase Bphy_4473 1515113 - 1514472 - | hypothetical protein TERM 1346 1514746 - 1514760 + g 74 -12.8 -3.29511 | opp_overlap 1514732 AGCAGGCCGGTGTCA GCCGGC GAT GCCGGC TTCTGCGCGGGTGCA Bphy_4474 1516046 - 1515426 - | lysine exporter protein LysE/YggA TERM 1347 1515721 - 1515732 + g 82 -7.2 -4.63184 | opp_overlap 1515711 TGAAAGCGCATCGGC CGGC GCTC GCCG TTTTTCACCTGCATT TERM 1348 1515849 - 1515832 - G 74 -11.3 -3.5882 | overlap 1515840 TACAGCACTTCGAAA CGGCGAA AGGC TTCGCCG AGCCCGAATCCCACC Bphy_4475 1517276 - 1516173 - | hypothetical protein Bphy_4476 1518293 - 1517349 - | AraC family transcriptional regulator TERM 1349 1518249 - 1518272 + g 70 -2.2 -4.66163 | overlap 1518251 1518253 CACTTGCTTCTTCGA CATGGAGCGC TCAT GCGCCCGTTG TTTTTCGCTAACGGT TERM 1350 1518560 - 1518545 - H 84 -2.5 -5.47218 | overlap 1518547 GGCGATTTAAAAAAA GGCTG GCCCGT CAACC TGGAATGTCGACGTG TERM 1351 1519147 - 1519179 + G 95 -15.5 -4.07568 | GTGCGTCGCGGCACC TCGTGGTCGCGGCCG ACT CGGCCACGGCAACGA TTTTCGCCAGCCGCG TERM 1352 1519632 - 1519657 + G 77 -12.5 -3.56643 | overlap 1519633 AGCGTGCTCGGACCG ATCAGCGGCGG TTTG CCGCCGCTGGC TTTGCCGGCTGTCAC TERM 1353 1519633 - 1519656 + G 78 -16 -2.73771 | overlap 1519632 GCGTGCTCGGACCGA TCAGCGGCGG TTTG CCGCCGCTGG CTTTGCCGGCTGTCA Bphy_4477 1518756 - 1520630 + | sulphate transporter TERM 1354 1520951 - 1520972 + G 74 -11.6 -3.61889 | GGAATGCGTTCGGAC TCGAGCCG TCGCAT CGGCTCGA TTTCCCCGATTTTTC Bphy_4478 1520872 - 1521270 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1355 1521688 - 1521649 - g 88 -9.2 -4.62471 | gap 1, overlap 1521651 GCGAAGGCGCAAAAA GATCC-CGCCGTGCGCCAG CAA CTCGCGGACGGCGTGAAGC AGCTGGATGCAACGG TERM 1356 1521685 - 1521651 - g 88 -14.2 -3.92577 | overlap 1521649 GAAGGCGCAAAAAGA TCCCGCCGTGCGCCAG CAA CTCGCGGACGGCGTGA AGCAGCTGGATGCAA TERM 1357 1521748 - 1521724 - g 74 -10.6 -3.74693 | TCCGACTGGACCAAA CGCTCGCCCG CCGAC CAGGCGCGCG ACGTCGCCGCGATGG Bphy_4479 1521325 - 1521957 + | hypothetical protein Bphy_4480 1521974 - 1523557 + | glucose-methanol-choline oxidoreductase TERM 1358 1523765 - 1523753 - g 71 -9.1 -3.72695 | ACGTGCTGCATGAAA TCGCG TCG CGCGA GAACATGACGACCAC Bphy_4481 1523629 - 1523964 + | hypothetical protein Bphy_4482 1524447 - 1524082 - | hypothetical protein Bphy_4484 1526681 - 1524864 - | chloride channel core TERM 1359 1526073 - 1526037 - G 77 -12.2 -3.61398 | overlap 1526039 TTCCGTGCCGAAGAA GATCGCGCGTGCGAAG CCTGC CACCGCACACGCGAGC GCGACGGGCAGAAAG TERM 1360 1526071 - 1526039 - G 77 -13.4 -3.38812 | overlap 1526037 CCGTGCCGAAGAAGA TCGCGCGTGCGAAG CCTGC CACCGCACACGCGA GCGCGACGGGCAGAA Bphy_4485 1527202 - 1526720 - | MarR family transcriptional regulator TERM 1361 1527181 - 1527167 - G 70 -5.8 -4.28049 | opp_overlap 1527169, overlap 1527180 GGGAAAACGGGAAAA TATCAT AAA ATGATA CATTCGGCGATGCGG Bphy_4486 1528383 - 1527262 - | CBS domain-containing protein TERM 1362 1528060 - 1528034 - G 75 -14.5 -2.78384 | gap 1, overlap 1528000 GGGCCGCCGAGCACA GCCGTCA-GCGC GACG GCGCCTGACGGC GGGTGCACGCAGCGC Bphy_4487 1528772 - 1529191 + | phasin family protein TERM 1363 1529241 - 1529220 - T 100 -18.7 -3.48276 | GGCTGGCTCAGACAA CGCGGGCCG CGTG CGGCCCGCG TCCGCTCAGGTGCGC Bphy_4488 1530311 - 1529247 - | hypothetical protein TERM 1364 1529315 - 1529289 - G 71 -12.2 -3.18582 | opp_overlap 1529265 1529279 CACGCGATGCACGAA GCGCAGCTTGTC GAC GACAGGCGGCGC AAGCGTGAACGGGTA TERM 1365 1530999 - 1531034 + G 77 -11.9 -3.56862 | gap 1, opp_overlap 1530975, overlap 1531028 1531029 ACTCGCGGCGGAACT CGCGCCGT-ATCGCGT CAGGC GCGCGATGACGCCGCG TTTCGCGGAATTTGT Bphy_4489 1530658 - 1534086 + | transglutaminase domain-containing protein TERM 1366 1534251 - 1534288 + G 75 -3.9 -4.60487 | gap 1, overlap 1534275 1534276 ACTGGGACGAACTGC GCGATGCATCGGGCCTGC TGC GCAAGCC-GTGGCGGCGC TTTTTCGAACTGCTC TERM 1367 1535386 - 1535337 - g 80 -16.3 -2.52464 | gap 1 CGTTTCTGCAACCGA CGTGGCCCGTGCGCACGCCGGACG GGC CGCCCGGCAT-CGCCCAGGGCGCG CAGCGGCTCGATGCG Bphy_4490 1534136 - 1536748 + | hypothetical protein TERM 1368 1537586 - 1537619 + G 73 -13.9 -2.79501 | gap 1 GCGGCATGATCCTTG GCGGCGGCGCACATCG CGT CGATGTG-GCCGTCGG TGTGGTGGCGCTGTG Bphy_4491 1536745 - 1537635 + | transglutaminase domain-containing protein Bphy_4492 1537710 - 1538135 + | MarR family transcriptional regulator Bphy_4493 1538199 - 1538642 + | MarR family transcriptional regulator Bphy_4494 1538728 - 1539852 + | secretion protein HlyD family protein Bphy_4495 1539874 - 1541454 + | EmrB/QacA family drug resistance transporter TERM 1369 1541651 - 1541607 - g 80 -14.9 -3.05343 | overlap 1541647 CGCAGACGGTGAAGA CCGTCGCGCCCGACGCGTGGA GCG TCGACGCGCCGAACGACACGG TGGACGCCGACCAGT TERM 1370 1542419 - 1542394 - g 71 -13.2 -3.03124 | CGCGACTGTCGAACA GCGCGCCGCC GAAGTG GGCGTCGCGC GAGCGGACCGCTATC Bphy_4496 1541501 - 1542955 + | RND efflux system outer membrane lipoprotein Bphy_4497 1543039 - 1544223 + | acetyl-CoA acetyltransferase TERM 1371 1544204 - 1544230 + F 71 -8.1 -4.07568 | gap 2 GCCAGGGTATCGCGC TGGCGC-TC-GAG ATC CTCTGACGCGCCA TTTTCCGCACCGACG Bphy_4498 1544332 - 1545270 + | 2-dehydropantoate 2-reductase Bphy_4499 1545347 - 1545640 + | hypothetical protein Bphy_4500 1547228 - 1545711 - | outer membrane porin TERM 1372 1547098 - 1547126 + g 81 -15.9 -2.94099 | GCTGCCTGTGCCACC GCCGCGCTCGCGG CTG CGGCGGGTGCGGC TGTGTCGTCCGCGAA TERM 1373 1547283 - 1547259 - R 73 -11.4 -3.4582 | opp_overlap 1547258 1547257, overlap 1547257 CTAGTTGATGAAACA GTGGCACGGC GGTCG GCCGTGTCAC GCTTTCTCGCCCGTT Bphy_4501 1548381 - 1547383 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Bphy_4502 1549367 - 1548378 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1374 1549169 - 1549185 + g 74 -5 -4.56597 | overlap 1549150 CGTTGTAGCGCGCTT CGCCGC TCACC GCGCCG TTTTTCGCGAGCAGG TERM 1375 1549327 - 1549289 - G 79 -14.6 -2.97245 | overlap 1549284 CCAGCGAGAACGACA CGCGCTGC-ACGGCGTCG ACGGG CG-CGCCGTCGCGGCGCG AAAAGCGCACGCTGA Bphy_4503 1550259 - 1549369 - | binding-protein-dependent transport systems inner membrane component TERM 1376 1549777 - 1549759 - G 70 -11 -3.42699 | ATCGAGCCACGAGAA CGCGCTGA TCG TCAGCACG ACGAGATAGAACGCG Bphy_4504 1551203 - 1550265 - | alkaline phosphatase Bphy_4505 1552838 - 1551222 - | extracellular solute-binding protein TERM 1377 1551380 - 1551396 + g 75 -12.3 -3.43492 | overlap 1551370 1551369 CATGTGCCTGCGTCA GCAACGC GGT GCGTTGC TTGTCGTCGGTCTGC TERM 1378 1552316 - 1552330 + g 83 -5.6 -4.87291 | opp_overlap 1552315 GTTGCGGGAAGAACG CGGCAG GCA CTTCCG TTTTTACTTCGAGTG TERM 1379 1552896 - 1552871 - R 75 -8.9 -4.03978 | opp_overlap 1552870 1552871 1552886 AAGTCGGGAGAGAAA CGCGAGCGGCA CGGA CGCCGCTAACG GTTATCCGCGTGATG Bphy_4506 1553616 - 1553047 - | XRE family transcriptional regulator Bphy_4507 1553763 - 1554167 + | hypothetical protein TERM 1380 1554386 - 1554401 + G 71 -10.4 -3.6217 | overlap 1554384 CCCATATCCCAGACC CGGTCG TTTT CGACCG TCTTTCTCATTGAGA TERM 1381 1555243 - 1555255 + G 81 -9.1 -4.21194 | GTTTGCGCTGCGCAA CGTCG ATC CGACG TTTTCGCTGGTCGGC Bphy_4508 1554362 - 1555885 + | amino acid/peptide transporter TERM 1382 1556051 - 1556020 - T 100 -23.2 -5.58209 | CGAAACCCAAAAAAA CAATCCCCGCACAC TAAC GTGTGCGGGGATTG CGAGAAATTACCTCA Bphy_4509 1556548 - 1556096 - | histone family protein DNA-binding protein TERM 1383 1556631 - 1556647 + r 72 -8.7 -3.91674 | overlap 1556635 GATTCTACAAGCGCT TTCGCGT TCT GCGCGAA TCTTTTGTGTATAAC TERM 1384 1556852 - 1556838 - R 71 -7.8 -4.08767 | overlap 1556850 GCGAGCGTCCGAAAA GCCCTG CAT CAAGGC ATCTGACTGCCAGCG Bphy_4510 1558346 - 1556877 - | transcriptional regulator TERM 1385 1558681 - 1558661 - H 87 -9.7 -4.67011 | opp_overlap 1558661 1558660, overlap 1558662 AACGTGATCGAAAAA CCGAATGCG CAG CGCATTCGC CTTCTATCCGACAAA TERM 1386 1558680 - 1558662 - H 79 -13.2 -3.39483 | opp_overlap 1558661 1558660, overlap 1558661 ACGTGATCGAAAAAC CGAATGCG CAG CGCATTCG CCTTCTATCCGACAA Bphy_4511 1558713 - 1560122 + | hypothetical protein TERM 1387 1561019 - 1560996 - g 71 -11.8 -3.28712 | gap 1 CGGCGTCTGCGAGAA CCTTGCGATGC TGC GCA-CGCAAGG CTCGAATCAATGCGA Bphy_4512 1560241 - 1561191 + | hypothetical protein Bphy_4513 1561205 - 1562011 + | transglutaminase domain-containing protein TERM 1388 1562081 - 1562091 + F 77 -2.4 -5.03314 | opp_overlap 1562060 GTCCCGCGGCATGCC GCCG CCC CGCC TTTTTTCCGGCTCGC Bphy_4514 1562145 - 1563047 + | hypothetical protein TERM 1389 1563176 - 1563147 - T 100 -9.1 -5.26875 | GCGCCAATGAAAAAA GCCAGCCTTCGGC TTGC GCCTCTGGCTGGC TTCAGGGTACGGCTC Bphy_4515 1564437 - 1563223 - | porin Bphy_4516 1566142 - 1564832 - | ribonuclease BN TERM 1390 1565015 - 1565031 + g 74 -11.5 -3.57144 | overlap 1564984 CAGCGTGAGCGCGGC GGCGCGC GTC GCGTGCC TTTCAGCCTCGAGGA TERM 1391 1565477 - 1565441 - G 70 -4.9 -4.36914 | overlap 1565444 1565445 1565446 CTTGCCCGCAGAAAA CAATGCGGCCGCGACCG TGC CGCCCACGAGCGCGTCG CGCCAGCGCACGGGC TERM 1392 1565502 - 1565444 - G 70 -5.8 -4.30995 | overlap 1565441 1565445 1565446 GCCCGCAGAAAACAA TG-CGGCCGCGACCGTGCCGCCCACGAG CGCGT CGCGCCAGC-GCACGGGCGCGTCGGGCA GGAACTTGAGCAGCG TERM 1393 1566881 - 1566863 - g 74 -11 -3.65046 | GCCCGACGGCAAGAA GGTCAACC GCT GGCTGACC ACGGGCATGCTCGCG Bphy_4517 1566399 - 1566989 + | molybdopterin oxidoreductase Fe4S4 region TERM 1394 1567557 - 1567540 - g 75 -6.9 -4.38154 | AGATGGTCGAGAAAA CCTGCGG CACG CCGAAGG ACAAGTTCCTGCACG Bphy_4518 1567038 - 1569470 + | formate dehydrogenase, alpha subunit TERM 1395 1570256 - 1570295 + G 71 -10.6 -3.65046 | GGGCGTCGCGAAGCC GCTCGCCGTTGCGGCGAT GGCG ATTACCGCGCTGGCGGGC TTCTTCCACTACACG Bphy_4519 1569480 - 1570418 + | formate dehydrogenase, beta subunit Bphy_4520 1570415 - 1571050 + | formate dehydrogenase, gamma subunit TERM 1396 1571098 - 1571047 - f 89 -15.9 -3.32769 | gap 1, opp_overlap 1571051 1571054, overlap 1571056 1571058 CCGCGAAAGCATCAA GTGACATGAGAGCTGCGCGCGCCG GGCGG CAGCGCGCGCAGCTCGC-TGTTAT CTGCTAGTGTTGACG TERM 1397 1571051 - 1571094 + F 100 -18.9 -3.57389 | gap 1, opp_overlap 1571047 1571056 1571058, overlap 1571054 GAAAGCATCAAGTGA CATGAGAGCTGCGCGCGCCG GGCGG CAGCGCGCGCAGCTCGC-TG TTATCTGCTAGTGTT TERM 1398 1571054 - 1571092 + F 100 -21.7 -3.35616 | opp_overlap 1571047 1571056 1571058, overlap 1571051 AGCATCAAGTGACAT GAGAGCTGCGCGCGCCG GGCGG CAGCGCGCGCAGCTCGC TGTTATCTGCTAGTG TERM 1399 1571090 - 1571056 - f 100 -25.1 -2.67209 | opp_overlap 1571054 1571051, overlap 1571047 1571058 CATCAAGTGACATGA GAGCTGCGCGCGCCG GGCGG CAGCGCGCGCAGCTC GCTGTTATCTGCTAG TERM 1400 1571088 - 1571058 - f 100 -21.9 -2.87522 | opp_overlap 1571054 1571051, overlap 1571056 1571047 TCAAGTGACATGAGA GCTGCGCGCGCCG GGCGG CAGCGCGCGCAGC TCGCTGTTATCTGCT Bphy_4521 1571145 - 1572077 + | formate dehydrogenase accessory protein FdhE TERM 1401 1572346 - 1572394 + G 88 -14.4 -3.83026 | gap 1, opp_overlap 1572334 GAAGCTCGTCGAGGA CGCGGCGCGCGCGC-TCGCTGCG CGTT CGCGGCCTCGCCTGCGCGCCGTG TTTAATCTGACGGGC Bphy_4522 1572122 - 1573558 + | L-seryl-tRNA(Sec) selenium transferase TERM 1402 1574276 - 1574241 - g 81 -11 -4.11692 | gap 1, opp_overlap 1574242, overlap 1574242 CATTCACGCGCAAAA CCGCGC-AGCCGATGCG GGC CGCGCCGGCCAGCGCTG CGCGTTGAATCTCGC Bphy_4523 1573555 - 1575495 + | selenocysteine-specific translation elongation factor Bphy_4525 1576526 - 1576969 + | cupin 2 domain-containing protein Bphy_4526 1578822 - 1577416 - | transcriptional regulator TERM 1403 1577500 - 1577512 + g 71 -7.7 -4.09739 | opp_overlap 1577495 ACCGACGAAGCTCAC GTCGA GGA TCGAC TTTTCGACCAGTTGC TERM 1404 1578339 - 1578313 - G 84 -13.7 -3.59979 | opp_overlap 1578298 1578298 GCGGCTGAGCGCAAA GCGGCCCTCGA TTTCG TCGAGCGCCGC GTCGCGACCGAGCAG Bphy_4527 1579164 - 1579844 + | two component transcriptional regulator TERM 1405 1584297 - 1584273 - g 71 -4.2 -4.56597 | overlap 1584275 1584276 1584291 TTGCTCGCCGAAAAA GATGCGCTGC TGCAT GAAGTGCATC ACCGCGTGAAGAACA TERM 1406 1584727 - 1584742 + G 76 -2.4 -4.96848 | overlap 1584722 1584728 TCGCCGACGACGGCG TCGGCC TCGC GCCCGG TTTTTCTCTCGAACG Bphy_4528 1579872 - 1584878 + | histidine kinase dimerisation/phosphoacceptor TERM 1407 1585671 - 1585661 - g 72 -8.2 -4.1899 | CGACGTGACGCAAAA GCGC CGG GCGC AGGAAGCGGAAATTC TERM 1408 1586139 - 1586126 - g 76 -9.5 -4.09685 | opp_overlap 1586127, overlap 1586102 CGGCACCTTCGAAAA CGCCG CGGT CGGCG TCGCGCATTGCGATC TERM 1409 1587000 - 1587023 + G 78 -13.2 -3.53012 | GGCGTGAGCGCCGAC CGGCTGGAAG CGAT CTTTCAGCCG TTTGAACAGGCGGGC Bphy_4529 1584891 - 1587860 + | multi-sensor hybrid histidine kinase TERM 1410 1587892 - 1587881 - g 73 -5.8 -4.3767 | opp_overlap 1587880 1587883 1587884 CGAGAGCACAATAAA GACG CGCC CGTC GTGCTTGTGGTCGAC Bphy_4530 1587863 - 1589023 + | response regulator receiver sensor signal transduction histidine kinase TERM 1411 1589370 - 1589339 - f 71 -12.2 -2.87211 | opp_overlap 1589333 ATGCGTTGTCACACA TCTCCGTCGCGTGC TGCC GCACGCGGCAGGGA GAGCATCGATTGCAT Bphy_4531 1589884 - 1590183 + | hypothetical protein TERM 1412 1590357 - 1590339 - g 75 -10.2 -3.92641 | AAGCCGACCCAGAAA GCGCCTGG CGG CCACGCGC AGAAGTCCACGGTGC TERM 1413 1590580 - 1590593 + G 70 -2.3 -4.65916 | overlap 1590581 TCACCCTTGGTGATG GTCCG CGCT CGGAG TTTTATTACGATGGC Bphy_4532 1590231 - 1591106 + | periplasmic protein-like protein TERM 1414 1591825 - 1591786 - g 84 -14.9 -3.33261 | opp_overlap 1591800, overlap 1591767 1591763 GGCGAACGCCTATAA CGCCGGCTACGCCGCGG GAGCGA CGGCCGCACAGCCGGCG CCTGCCCCCGTCAGT Bphy_4533 1591118 - 1591996 + | hypothetical protein Bphy_4534 1593054 - 1592164 - | IclR family transcriptional regulator TERM 1415 1593016 - 1593000 - G 71 -9.5 -3.73068 | opp_overlap 1593000 TTTTTAATTCAACAA TGTGCAT TGT ATGCACA TTTCGGAGATTTTGT Bphy_4535 1593147 - 1594994 + | monooxygenase FAD-binding TERM 1416 1595483 - 1595500 + G 70 -5.5 -4.30844 | gap 1, overlap 1595478 TCGGCCGTGCCGCCG CGCGCATG AAC CG-GCGCG TTTTGCTGATCGGCT Bphy_4536 1594996 - 1595949 + | extradiol ring-cleavage dioxygenase class III protein subunit B Bphy_4537 1595953 - 1596741 + | 4-oxalocrotonate decarboxylase Bphy_4538 1596759 - 1597706 + | acetaldehyde dehydrogenase (acetylating) Bphy_4539 1597725 - 1598744 + | 4-hydroxy-2-oxovalerate aldolase TERM 1417 1598736 - 1598726 - f 83 -8.2 -4.62069 | overlap 1598727 GCTCGATCTGAAAAA GCGC GAA GCGC ACGCCTGAACCATCC Bphy_4540 1598803 - 1600056 + | major facilitator transporter Bphy_4541 1600071 - 1600937 + | alpha/beta hydrolase fold protein TERM 1418 1601350 - 1601367 + T 75 -5.6 -4.56597 | opp_overlap 1601365 GAACGCGGTTCGTCT GACGTT TATGAC AACGTC TTTTTGAAAAACCGC Bphy_4542 1602620 - 1601355 - | major facilitator transporter Bphy_4543 1604385 - 1602754 - | gamma-glutamyltransferase TERM 1419 1604234 - 1604214 - G 77 -14.7 -2.87564 | opp_overlap 1604223 TCATGTGCGGATAGA CCACCGCGA TGG TCGCGGCGG CGGCGATCATCGCTT Bphy_4544 1605303 - 1604521 - | GntR family transcriptional regulator Bphy_4545 1605951 - 1605385 - | MarR family transcriptional regulator Bphy_4546 1606282 - 1607544 + | amidohydrolase TERM 1420 1607876 - 1607851 - g 76 -9.8 -4.09685 | gap 1 TGGCAGGCTTCAAAA GCTCGC-AGCA GCCCG TGCTCGCGAGC GGCAAGGTGCGCCAG TERM 1421 1609845 - 1609793 - g 83 -14.9 -3.29144 | gap 2, overlap 1609794 GGAGTTCGGCCAGAA GGGCATCGGCGAGAGC-G-GGGCGA TCGGT CCGCCCGCCGCGCTCGCCAATGCCG TCAACGATGCACTTC TERM 1422 1609844 - 1609794 - g 86 -18.4 -2.57344 | gap 2, overlap 1609793 GAGTTCGGCCAGAAG GGCATCGGCGAGAGC-G-GGGCGA TCGGT CCGCCCGCCGCGCTCGCCAATGCC GTCAACGATGCACTT Bphy_4547 1607565 - 1609973 + | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Bphy_4548 1609970 - 1610806 + | molybdopterin dehydrogenase FAD-binding Bphy_4549 1610803 - 1611321 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Bphy_4550 1611347 - 1612030 + | carbon monoxide dehydrogenase subunit G TERM 1423 1612189 - 1612210 + G 76 -5.7 -4.53765 | overlap 1612190 CCGCGCAAGCCCTCC GCGCCGGTG CGCT CGTCGGCGA TTTTGTGCTGTCTGT Bphy_4551 1612033 - 1613226 + | putative alcohol dehydrogenase Bphy_4552 1613223 - 1613612 + | hypothetical protein TERM 1424 1614535 - 1614499 - g 75 -13.9 -3.03441 | gap 2, overlap 1614501 CATCACGTGCGAACA GATCGC--CGACGCGCA GCGTG TGCGCGTCGAAGCGATC CGCACGATGGCCGAT Bphy_4553 1613612 - 1614814 + | amidase TERM 1425 1615545 - 1615584 + G 80 -15.1 -3.07816 | TGTCCGCTCGGCCTC G-GGTCGGCGTCGCGCGAC GCTC GT-GCGCGGCGTCGACCGC TTCCATCACTGGGAC Bphy_4554 1614889 - 1615719 + | phytanoyl-CoA dioxygenase TERM 1426 1615764 - 1615728 - T 75 -12.2 -3.2827 | overlap 1615729 1615736 GCAGTGAACGAGCAA TCCTGAAACCCGGCGC TCGAC GCGCCGCGATTCAGGG TTCAGGGCTCGCCTC TERM 1427 1615763 - 1615729 - T 84 -15.7 -2.5664 | overlap 1615728 1615736 CAGTGAACGAGCAAT CCTGAAACCCGGCGC TCGAC GCGCCGCGATTCAGG GTTCAGGGCTCGCCT Bphy_4555 1616677 - 1615778 - | ABC transporter related Bphy_4556 1617333 - 1616674 - | polar amino acid ABC transporter, inner membrane subunit Bphy_4557 1617974 - 1617330 - | polar amino acid ABC transporter, inner membrane subunit Bphy_4558 1618865 - 1617996 - | extracellular solute-binding protein TERM 1428 1618604 - 1618635 + g 70 -11.6 -3.4072 | overlap 1618595 GCTTCACGTCGACGC CGATCTTCTTGCGT ACCA GCGCGAGGAGGTCG TTATCATAGCCCGTG Bphy_4559 1620547 - 1619156 - | transcriptional regulator TERM 1429 1620313 - 1620343 + g 87 -14.6 -3.57561 | opp_overlap 1620308, overlap 1620341 CACGCACGAACGTGC CGCTGCCTGCCCGG GCA TCGAGCAGGCCGCG TTTGCGCGCTTCCGC TERM 1430 1620781 - 1620771 - H 74 -8.2 -4.2349 | CTTCGATACCCAAAA CCCG CGC CGGG CAACGCTAACAAAGA Bphy_4560 1620956 - 1621438 + | hypothetical protein Bphy_4561 1621456 - 1622478 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Bphy_4562 1622498 - 1623580 + | radical SAM domain-containing protein TERM 1431 1623870 - 1623907 + G 72 -13.3 -3.05816 | ATGGTTCGGCTCCCG GCTCGCCGTGCATGCGG CGTT CCGCTCGCATGGCAAGC TTGGATCGACGCTGA Bphy_4563 1623583 - 1624146 + | GCN5-related N-acetyltransferase TERM 1432 1624672 - 1624684 + G 70 -5.5 -4.3208 | TCGATCTGCGCGGCC GGTTC GAA GAGCC TTTTCCGTTCTGGAA Bphy_4564 1624143 - 1625129 + | AIR synthase-like protein Bphy_4565 1625126 - 1626298 + | glycosyl transferase group 1 Bphy_4566 1626322 - 1626606 + | hypothetical protein TERM 1433 1627303 - 1627320 + G 83 -9.1 -4.36914 | gap 1 CTCGCGGTTGGGGAT GCGCCGCG TTG CGC-GCGC TTTTATCGCGACCGC Bphy_4567 1626673 - 1627965 + | FAD dependent oxidoreductase Bphy_4568 1627968 - 1628783 + | hypothetical protein Bphy_4569 1628780 - 1630891 + | methylmalonyl-CoA mutase, large subunit Bphy_4570 1631028 - 1632176 + | hypothetical protein TERM 1434 1632695 - 1632679 - g 79 -10.8 -4.18018 | opp_overlap 1632688 GCCCGCGACGGAAAA CCGCGC CTTGC GCGCGG CCGCACGCTTCAGTG Bphy_4571 1632179 - 1632961 + | PGAP1 family protein Bphy_4572 1633347 - 1634057 + | short-chain dehydrogenase/reductase SDR TERM 1435 1634976 - 1634945 - g 70 -14.4 -2.53263 | gap 1 GTGAGTCCGAACGCA GCGCCGGCGCG-GAG CGA CTCGCGCGCAGACGC CGCGAAAAGGCACGT Bphy_4574 1634512 - 1635045 + | hypothetical protein TERM 1436 1636605 - 1636574 - g 71 -7.8 -4.18018 | overlap 1636575 TCGGCTCATCGAAAA CGCCGTCGAGGCCA TGGA CGGCCACGGCAGCA TCACGATCCGTACGC TERM 1437 1636643 - 1636695 + G 72 -12.9 -3.05562 | gap 4, overlap 1636645 TGGGCACTGCGCGGT GGTGGAGTTCATCGACGACGGGCCGGG CAT CCC-GCCCGGCGTCG-TGA-C-CCATC TGTTCGAGCCTTTCT Bphy_4575 1635474 - 1636901 + | cyclic nucleotide-binding protein TERM 1438 1637727 - 1637737 + G 80 -8.2 -4.40804 | overlap 1637722 GACTGCGCACGCGTT CGGC CAC GCCG TTTTATGACCTGGTG TERM 1439 1637758 - 1637789 + G 73 -14.4 -2.87931 | gap 1, overlap 1637756 TGACCTGGTGATCGT CGGCGGCGGGCCGGC TGG GTTGGCC-GCTGCCG TGTATGGCGCGTCCG TERM 1440 1638424 - 1638442 + G 78 -3.7 -4.78077 | opp_overlap 1638422, overlap 1638427 GGGGCGCATCGAAGC GGCCCCG GCCAG CGGGCTC TTTATTTTCATTGGA Bphy_4576 1637060 - 1638721 + | response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1441 1638939 - 1638902 - g 89 -5.4 -5.1101 | overlap 1638903 TGATCACGGAAAAAA CGATCGGCGGTCGGCA GGTGTT CGACGACCGGCGACCC GCACCGGCATCCATT Bphy_4577 1638718 - 1640109 + | cyclic nucleotide-binding protein Bphy_4578 1640392 - 1641282 + | extracellular solute-binding protein Bphy_4579 1642330 - 1641452 - | hypothetical protein Bphy_4580 1642874 - 1642419 - | hypothetical protein Bphy_4581 1643249 - 1643617 + | integral membrane protein-like protein Bphy_4582 1643949 - 1645124 + | putative lipoprotein Bphy_4583 1645147 - 1645338 + | putative lipoprotein Bphy_4584 1645839 - 1645471 - | hypothetical protein TERM 1442 1645727 - 1645710 - G 72 -6.9 -4.2349 | overlap 1645711 GTGCCAGATTGAAAA TGCTGCC TGTC GGCAGCG ATACATAGGCTGGGC TERM 1443 1647227 - 1647257 + G 86 -9.6 -4.57073 | CAGCATCTACTATCT GTGCCGGTTCGTTC TTC GGTTGACCCGGCAC TTTTTCGACGCGGTG Bphy_4585 1646406 - 1648121 + | MscS mechanosensitive ion channel Bphy_4586 1648459 - 1648148 - | hypothetical protein Bphy_4587 1648908 - 1648570 - | histone family protein nucleoid-structuring protein H-NS Bphy_4588 1652334 - 1649044 - | TPR repeat-containing adenylate/guanylate cyclase Bphy_4589 1653749 - 1652451 - | peptidase U32 TERM 1444 1653893 - 1653917 + r 75 -10.7 -3.72576 | CGTCCCTGGAGCGGC CGATTGACACG GAG CGAGTCGATCG TTTCATCAAGAACGC Bphy_4590 1655014 - 1653935 - | LacI family transcription regulator TERM 1445 1654970 - 1654942 - G 77 -12.4 -3.62046 | gap 1, overlap 1654944 CCACGTCGCCAAGAA CAGCACGC-CCGC TCCT GCGGCGCGTGCGG GCGACGGGCGTGTCA TERM 1446 1654968 - 1654944 - G 80 -13.6 -3.38991 | gap 1, overlap 1654942 ACGTCGCCAAGAACA GCACGC-CCGC TCCT GCGGCGCGTGC GGGCGACGGGCGTGT Bphy_4591 1655457 - 1656344 + | ribokinase TERM 1447 1657093 - 1657142 + G 79 -6.2 -4.63218 | gap 1 AAGCCGACGCCGAAC CGGCGGCGGGCCCCGCGCCGAAG CTCAC CTTCGCCGAATGGCGCGC-GCTG TTTTCTTACGGCACG Bphy_4592 1656444 - 1657766 + | major facilitator transporter Bphy_4593 1657824 - 1658771 + | dihydrodipicolinate synthetase Bphy_4594 1659084 - 1660214 + | porin TERM 1448 1660232 - 1660247 + F 71 -11.8 -2.92267 | opp_overlap 1660232, overlap 1660224 GACGCTTGAAAGAAA GCCCGC GAGA GCGGGC TACTTGCTTTCTCGC TERM 1449 1660247 - 1660232 - f 100 -11.8 -4.42062 | opp_overlap 1660232 1660224 GACGCTTGAAAGAAA GCCCGC GAGA GCGGGC TACTTGCTTTCTCGC Bphy_4596 1660767 - 1660955 + | hypothetical protein Bphy_4597 1662059 - 1660998 - | O-methyltransferase family protein TERM 1450 1661238 - 1661253 + g 70 -6.1 -4.26076 | CGCGTCGTGGCATTT GCGCA GCAACA TGCGC TTTTGGTCCAGATCC TERM 1451 1661544 - 1661520 - G 77 -12.2 -3.64703 | gap 1, overlap 1661521 GTTCTGCCACGGAAA CTGCTGCGCGA TGGC TCGCGCAGC-G CCGAGACTGACGCCG TERM 1452 1662346 - 1662363 + H 72 -5.5 -4.54343 | overlap 1662315 GGCAACGCCGGCGCC GTGTGCG ATTC CTCACAC TTTGTTTCAATTTGT TERM 1453 1662651 - 1662622 - g 72 -3.4 -4.59773 | gap 1, opp_overlap 1662605, overlap 1662626 GCGCAGTGCGAAAAA CGGACGCGCC-CC TTTCG GGCAGCTCGACCG TCAGCCTGTCGACGC Bphy_4598 1662516 - 1662818 + | anti-sigma-28 factor, FlgM Bphy_4599 1664601 - 1662955 - | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bphy_4600 1664931 - 1665620 + | hypothetical protein Bphy_4601 1665806 - 1666813 + | hypothetical protein TERM 1454 1668243 - 1668257 + G 74 -12.8 -3.24232 | overlap 1668241 1668239 TATACCTGATCGCCA CGGCCG TTG CGGCCG TCTATTTCCACGAGC Bphy_4602 1667132 - 1668361 + | acyltransferase 3 Bphy_4603 1668464 - 1668895 + | hypothetical protein Bphy_4604 1669034 - 1669354 + | hypothetical protein Bphy_4605 1669726 - 1670811 + | hypothetical protein TERM 1455 1670794 - 1670813 + T 90 -2.8 -5.78622 | gap 1, overlap 1670789 1670798 CGGGGCCTGGCGCCA CATGCTCGC CTG GCGTG-ATG TTTTTTTTCGAATCG Bphy_4606 1671574 - 1670861 - | pirin domain-containing protein TERM 1456 1671591 - 1671630 + r 79 -13.5 -3.04144 | opp_overlap 1671603, overlap 1671594 1671599 GTGTGATACTCCACT CGCGCGAAGGCAGCCGC ATCGAC GCCGCTGCCTTCGCTGG TGTTCACGCTCAGAC TERM 1457 1671594 - 1671627 + r 100 -18.2 -2.74523 | opp_overlap 1671603, overlap 1671591 1671599 TGATACTCCACTCGC GCGAAGGCAGCCGC ATCGAC GCCGCTGCCTTCGC TGGTGTTCACGCTCA Bphy_4607 1672401 - 1671640 - | short-chain dehydrogenase/reductase SDR TERM 1458 1672640 - 1672673 + G 76 -9.5 -4.18197 | ACCGTATCGCGCGGG GTCGCGCGCCTGG AGGAGCGG TTGGGCGCGCGGC TTTTCAATCGCACGT Bphy_4608 1672523 - 1673440 + | LysR family transcriptional regulator Bphy_4609 1673548 - 1674081 + | hypothetical protein Bphy_4610 1674143 - 1675387 + | amidase Bphy_4611 1676032 - 1675766 - | CsbD family protein TERM 1459 1676146 - 1676167 + H 72 -6.5 -4.32046 | opp_overlap 1676148, overlap 1676136 1676142 GCTGGGCCCGTCAGA CACGCGCTT TCGC GAGCGGGTG TTTCGTTTTTGCACG Bphy_4612 1676250 - 1676627 + | hypothetical protein Bphy_4613 1676624 - 1676938 + | hypothetical protein TERM 1460 1677193 - 1677170 - g 71 -7.6 -4.09685 | gap 1, overlap 1677171 1677192 TCGCACGGTTGAAAA GCT-TTTCGAA GCG TTCGAAAAAGC CGCCGCCGACGACCT TERM 1461 1677206 - 1677192 - g 76 -5.6 -4.58283 | overlap 1677170 GAAGCGTTCGAAAAA GCCGCC GCC GACGAC CTGGAAGCGAAGGGC Bphy_4614 1677069 - 1677626 + | hemerythrin HHE cation binding domain-containing protein TERM 1462 1677646 - 1677672 + F 84 -15.9 -2.54523 | gap 1 TGCTGTTGCCGTCAT CGGCCCGCAGCC CTGC GG-TGCGGGCCG TCAGTTGGGATGTGA Bphy_4615 1677699 - 1677995 + | hypothetical protein TERM 1463 1678109 - 1678084 - f 74 -12.5 -2.87132 | CGTCGGTTTCAGACA GCGCTCGCCGG ATTA CCGGCGAAGGC GCTGCATGGCGCGAG TERM 1464 1678216 - 1678204 - f 93 -9.1 -4.82667 | opp_overlap 1678204 CCAGCACATCAAAAA CGTGC CGT GCACG TCCTTGGACACCGCG Bphy_4616 1678449 - 1678787 + | hypothetical protein TERM 1465 1678892 - 1678853 - T 87 -15 -3.32844 | gap 1, opp_overlap 1678847 GGGCGCATTGGAGAA CGTCTGCGACGGTGGCCAA ACA TCGGCCGGCGTCGCAG-CG AAAGCCTTATTTATA Bphy_4617 1680369 - 1678903 - | succinic semialdehyde dehydrogenase Bphy_4618 1681753 - 1680470 - | 4-aminobutyrate aminotransferase TERM 1466 1680580 - 1680566 - G 91 -6.4 -5.10208 | overlap 1680567 CAACGGGAACAAAAA CCGAAC AAC GTTCGA ATAAACACCACACAC TERM 1467 1681358 - 1681406 + g 76 -9.5 -4.09739 | gap 1, opp_overlap 1681346 AAAGCCGCCCGTGAA CGCGATCACGCCCGGACG-GCC CGTGAA GGCGCGTGCGATCTTGATCGCG TTTTCGACGGCTTCG TERM 1468 1683118 - 1683166 + G 73 -12.3 -3.3164 | gap 1, opp_overlap 1683112, overlap 1683144 TCCGCAAGATGCGCA CGCTGTACGGGCAGCGCCGCGC CACCTT GCTCGACGCTGCC-GCGCGGCG TTATGGCAATGCGTT Bphy_4619 1681872 - 1683434 + | transcriptional regulator Bphy_4620 1684287 - 1683451 - | hypothetical protein TERM 1469 1683898 - 1683878 - G 81 -7.5 -4.56597 | overlap 1683880 1683882 1683895 CTTTCGCCCGAAAAA CGCATGTCG CGG CGAAACGCG AGCGACACGATGCCG Bphy_4621 1685265 - 1684423 - | phosphonate ABC transporter, inner membrane subunit Bphy_4622 1686230 - 1685262 - | phosphonate ABC transporter, periplasmic phosphonate binding protein Bphy_4623 1687134 - 1686325 - | phosphonate ABC transporter, ATPase subunit Bphy_4624 1687538 - 1688572 + | peptidase M14 carboxypeptidase A Bphy_4625 1688569 - 1689405 + | alpha/beta hydrolase fold protein TERM 1470 1691825 - 1691794 - g 93 -19.4 -3.12668 | opp_overlap 1691798 1691799 GACGCTTACATCGAA CGCGCGCTGACGGG CAAT CCCGCCATCGCGCG CATGCTCGTCGAGCT TERM 1471 1694469 - 1694452 - g 72 -8.4 -4.08394 | ACATGGCGCGCAAAA CGCGAG GATGCG CTCGCG CGGTATGCGCAACTG Bphy_4626 1689682 - 1694586 + | NAD-glutamate dehydrogenase TERM 1472 1694638 - 1694610 - f 100 -21.8 -3.05816 | opp_overlap 1694610 CGAGCTTCGACTCAA CGCGCCGTCGTC GTGAT GACGACGGCGCG TTTTTCTTTGCAGGG TERM 1473 1694610 - 1694638 + F 100 -22.5 -5.27335 | opp_overlap 1694610 CGAGCTTCGACTCAA CGCGCCGTCGTCG TGA TGACGACGGCGCG TTTTTCTTTGCAGGG Bphy_4627 1694722 - 1695783 + | selenide, water dikinase Bphy_4628 1695827 - 1696753 + | cation diffusion facilitator family transporter TERM 1474 1696773 - 1696811 + F 100 -17.5 -4.78661 | GCTGCGCAGCTCACG GACCCGCGAATGGTGCA AATGA TGCATCGCTCGCGGGTC TTTTCGTTTTTGCAT Bphy_4629 1697004 - 1698071 + | purine nucleoside permease Bphy_4630 1699187 - 1698096 - | ISRSO5-transposase protein TERM 1475 1699267 - 1699306 + r 100 -18.1 -3.6502 | gap 1, opp_overlap 1699272, overlap 1699268 1699272 CGGGACACTAGTACC G-CAAAGCGCTCAATCGC TTGAT GCGATTGGGCGCTTTGTC TTTCAGTGCACGCTC TERM 1476 1699268 - 1699304 + r 100 -21.8 -3.40597 | opp_overlap 1699272, overlap 1699267 1699272 GGGACACTAGTACCG CAAAGCGCTCAATCGC TTGAT GCGATTGGGCGCTTTG TCTTTCAGTGCACGC TERM 1477 1699300 - 1699272 - R 88 -14.6 -3.62572 | opp_overlap 1699268 1699267 1699272 CACTAGTACCGCAAA GCGCTCAATCGC TTGAT GCGATTGGGCGC TTTGTCTTTCAGTGC TERM 1478 1699272 - 1699300 + r 100 -16.8 -4.35044 | opp_overlap 1699272, overlap 1699268 1699267 CACTAGTACCGCAAA GCGCTCAATCGC TTGAT GCGATTGGGCGC TTTGTCTTTCAGTGC TERM 1479 1699437 - 1699421 - R 86 -5.8 -5.13354 | TCGATAAAAAAGAAA CACGCT TGTTG AGCGCG AGTTACTGACCGCGA TERM 1480 1699449 - 1699477 + r 77 -11.8 -3.57144 | gap 2 CGCGAGTTACTGACC GCGAGCGACGCGCA CGT TGC-CGTCGC-CGC TTTGCGCGTCGAGGC Bphy_4631 1699751 - 1699440 - | hypothetical protein Bphy_4632 1700947 - 1699943 - | LysR family transcriptional regulator Bphy_4633 1701143 - 1701997 + | alpha/beta hydrolase domain-containing protein Bphy_4634 1702033 - 1703322 + | RND family efflux transporter MFP subunit Bphy_4635 1703393 - 1706578 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 1481 1706613 - 1706600 - g 74 -5.3 -4.53685 | overlap 1706612 AAACGACAATGAAAA GGTTT GAAC AAACC CGCAACCTGAGTGGC Bphy_4636 1706593 - 1708158 + | RND efflux system outer membrane lipoprotein TERM 1482 1708192 - 1708211 + F 100 -15 -6.13503 | opp_overlap 1708192 TGGCGATGAGAGGAA GCGGACCC TTGC GGGTCCGC TTTTTTTTGTTCATC TERM 1483 1708211 - 1708192 - f 87 -15 -3.29471 | opp_overlap 1708192 TGGCGATGAGAGGAA GCGGACCC TTGC GGGTCCGC TTTTTTTTGTTCATC TERM 1484 1708769 - 1708786 + G 73 -5.5 -4.41797 | gap 1, overlap 1708771 1708772 CGATCTGGCCGAGGT GCTGGGCG GCG CGCTC-GC TTTTCATCTGCTTTT Bphy_4637 1708383 - 1709711 + | Mn2+/Fe2+ transporter TERM 1485 1709768 - 1709749 - T 100 -13.6 -5.52986 | AGCGGACGAAAAAAA GCCGGTCT CGAG AGACCGGC TTCAAATGCAATTCG Bphy_4638 1710438 - 1709815 - | flagellar transcriptional activator FlhC Bphy_4639 1710775 - 1710455 - | flagellar transcriptional activator TERM 1486 1710809 - 1710823 + r 76 -7.1 -4.46656 | CCGAATTACTTATGT CGGCA TTTTC TGCCG TTTTGGTCTTATGCC Bphy_4640 1711616 - 1711323 - | hypothetical protein TERM 1487 1711528 - 1711474 - G 74 -14.9 -2.62396 | gap 1, overlap 1711462 1711461 1711477 TAGGCGCCGATATGA CAACCGTCG-GCGCGCCTGGCGCCAT AGCC AGGACGCGGGGCGCCCGCGACGGCTG CGATGAGGGATCGCA TERM 1488 1711525 - 1711477 - G 78 -13 -3.46602 | gap 1, overlap 1711462 1711461 1711474 GCGCCGATATGACAA CCGTCG-GCGCGCCTGGCGCCAT AGCC AGGACGCGGGGCGCCCGCGACGG CTGCGATGAGGGATC Bphy_4641 1712547 - 1711741 - | hypothetical protein Bphy_4642 1713190 - 1712633 - | GCN5-related N-acetyltransferase Bphy_4643 1714147 - 1713200 - | XRE family transcriptional regulator TERM 1489 1714145 - 1714121 - G 74 -11.3 -3.6502 | GACGTGCGAGGTAAA GCGCGGCCGCA GCA TGCCGCGGCGC ATCCGGACGGCGCAC Bphy_4644 1714228 - 1714482 + | hypothetical protein Bphy_4645 1714680 - 1715048 + | hypothetical protein Bphy_4646 1715087 - 1715314 + | hypothetical protein TERM 1490 1715463 - 1715437 - g 82 -3.7 -5.06089 | gap 1, overlap 1715438 AAACGACAAACAAAA TCGGCGCCGC GGGTGCGG GCAGCGC-GA CGGGCACATCGGGCA Bphy_4647 1715412 - 1715744 + | hypothetical protein Bphy_4648 1715868 - 1717430 + | TPR repeat-containing protein TERM 1491 1717466 - 1717485 + T 93 -13.6 -3.91897 | opp_overlap 1717466 AAGCAGATAAAAAAA CGGAGCAC GCGG GTGCTCCG TTTCTACGTCGACAC TERM 1492 1717485 - 1717466 - T 100 -13.6 -5.75478 | opp_overlap 1717466 AAGCAGATAAAAAAA CGGAGCAC GCGG GTGCTCCG TTTCTACGTCGACAC Bphy_4649 1717919 - 1717506 - | heat shock protein Hsp20 Bphy_4650 1718372 - 1717935 - | heat shock protein Hsp20 Bphy_4651 1719536 - 1718625 - | hypothetical protein Bphy_4652 1719784 - 1720857 + | deoxyribose-phosphate aldolase Bphy_4653 1720871 - 1723264 + | aldehyde dehydrogenase TERM 1493 1723502 - 1723537 + G 72 -13.3 -3.04461 | gap 1, overlap 1723536 TGCGGCTCGACGGCG TCGAT-GCGCCGCGCG CGATT CGCGCGGTGCTGTCGG TGTTGCCGCTCGATA Bphy_4654 1723345 - 1723815 + | RbsD or FucU transport Bphy_4655 1723821 - 1724780 + | ribokinase Bphy_4656 1724830 - 1725849 + | monosaccharide-transporting ATPase Bphy_4657 1725949 - 1726953 + | periplasmic binding protein/LacI transcriptional regulator TERM 1494 1728275 - 1728324 + G 95 -14.9 -4.18018 | opp_overlap 1728275, overlap 1728276 1728278 GTCGGGCGGCAACCA GCAGCGCGTGCTGATCGGACGCT GGCT GGCGATCGATCCGCGCGTGCTGA TTTTGCATGGGCCGA TERM 1495 1728276 - 1728323 + G 89 -18.4 -3.10597 | opp_overlap 1728275, overlap 1728275 1728278 TCGGGCGGCAACCAG CAGCGCGTGCTGATCGGACGCT GGCT GGCGATCGATCCGCGCGTGCTG ATTTTGCATGGGCCG TERM 1496 1728278 - 1728321 + G 80 -15.2 -3.11208 | opp_overlap 1728275, overlap 1728276 1728275 GGGCGGCAACCAGCA GCGCGTGCTGATCGGACGCT GGCT GGCGATCGATCCGCGCGTGC TGATTTTGCATGGGC Bphy_4658 1727031 - 1728563 + | ABC transporter related TERM 1497 1729053 - 1729065 + G 76 -9.1 -4.07535 | TGTGTTGTTGACGTT CGTCG GCA CGACG TTCTTTATGAACATT Bphy_4659 1728565 - 1729614 + | monosaccharide-transporting ATPase Bphy_4660 1730439 - 1729717 - | DeoR family transcriptional regulator TERM 1498 1730795 - 1730807 + G 79 -2.6 -4.9792 | overlap 1730794 CTTCTTGCGCGCCTC GCGC TCGCC GTGC TTTTTCTGTGGGGTG Bphy_4661 1730750 - 1731187 + | DoxX family protein Bphy_4662 1731237 - 1731608 + | hypothetical protein TERM 1499 1731642 - 1731682 + T 100 -27.8 -4.24342 | opp_overlap 1731642 1731650, overlap 1731675 1731678 GCGCAGCGCAGTACA GCACGACACCCACGATGC CACCT GCGTCGTGGGTGTCGTGC TTTGTTCGTCCAAAG TERM 1500 1731682 - 1731642 - T 100 -25.6 -2.79796 | opp_overlap 1731642 1731675 1731678, overlap 1731650 GCGCAGCGCAGTACA GCACGACACCCACGATGC CACCT GCGTCGTGGGTGTCGTGC TTTGTTCGTCCAAAG Bphy_4663 1733273 - 1731702 - | major facilitator transporter TERM 1501 1733349 - 1733329 - R 100 -18.3 -3.09516 | opp_overlap 1733331 GGCCCGAGGAGGCAA GCGGCGTGC CGC GCACGCCGC TGCAGCAGCGTTACC TERM 1502 1733331 - 1733374 + r 78 -3.7 -5.00616 | gap 2, opp_overlap 1733329, overlap 1733354 CCCGAGGAGGCAAGC GGCGTGCCGC-G-CACGCCGC TGCA GCAGCGTTACCGCGCCGCGTC TTTTTTCACGCAGCA Bphy_4664 1734667 - 1733360 - | major facilitator transporter TERM 1503 1734708 - 1734694 - H 71 -12.8 -2.59793 | overlap 1734691 1734693 GTAGGGATAGAAGAG CCGCGC GGC GCGCGG AGTACGGCTTCGTCG Bphy_4665 1734921 - 1735646 + | two component transcriptional regulator TERM 1504 1735662 - 1735680 + T 90 -10.2 -4.56597 | opp_overlap 1735673 TTGCAGCTGAGTCGA CGCTCACG CAA CGCGAGCG TTTTTCGCGGCGGCC TERM 1505 1735687 - 1735706 + T 100 -16.4 -4.64334 | opp_overlap 1735673 ACGCGAGCGTTTTTC GCGGCGGC CGAG GCCGCCGC TTTTGTTGCCGGCTT Bphy_4666 1736635 - 1735730 - | dihydrodipicolinate synthetase TERM 1506 1736352 - 1736330 - G 72 -9 -3.99324 | opp_overlap 1736348 CGGCAGCACCATAAA GCCCGCAGCG CCG CGCTTCGCGC CCGCTTCGGCCTGCC TERM 1507 1736420 - 1736459 + g 70 -5.7 -4.25104 | gap 2, overlap 1736415 CAGCACGGGGACGCG GCCGCGCGCTGCTTCGACG GCTA CGTCG-AGCACTGC-CAGC TTTTCGTCGAGCGCG TERM 1508 1736515 - 1736546 + g 70 -2.2 -4.59773 | gap 1, overlap 1736517 CGCACACGATGATTC CATCGACGC-CTGCT TCG ATCTGCGCGTCGATA TTTTTGGCGGTGGCC Bphy_4667 1736916 - 1737950 + | proline racemase TERM 1509 1738712 - 1738671 - g 78 -13.6 -3.19602 | overlap 1738669 TCGGCTACATCAAGA GCGCGCATCACGCGACGG GCACGT CCGTCGCGTTCAACGCGC AGCCTCGGCCCACAG Bphy_4668 1737947 - 1739086 + | FAD dependent oxidoreductase Bphy_4669 1739079 - 1739351 + | ferredoxin Bphy_4670 1739348 - 1740631 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1510 1741013 - 1740974 - g 95 -10.6 -4.72729 | opp_overlap 1740975 1740975, overlap 1740988 CAAGGAAAAGGAAAA GCTGCTCGGCAAGACGGC CGAG GACGTGTTTCCGAGCCGC TTCGGCCGCATCTAC Bphy_4671 1740711 - 1741550 + | AraC family transcriptional regulator Bphy_4672 1741573 - 1741908 + | hypothetical protein Bphy_4673 1742251 - 1741940 - | hypothetical protein Bphy_4674 1742770 - 1742429 - | hypothetical protein TERM 1511 1743043 - 1743020 - R 81 -3.9 -5.12707 | gap 2, overlap 1743025 GCAAAGCGCAAAAAA CCAA-G-GGCG CCCG CGCCGCGTTGG CGCATAAGAAACCGC Bphy_4675 1744557 - 1743061 - | major facilitator transporter TERM 1512 1743397 - 1743385 - G 81 -3.3 -5.03145 | CAATGCGGGAAAAAA GCCGC CCA GCAAC ACGATGACCCAGATG TERM 1513 1744139 - 1744113 - G 71 -8.1 -4.12188 | gap 1, overlap 1744114 1744116 CCACGACGCGGAAAA TGATGATGCGCC CTAC GG-GCACCATCA TCGCGCCCCCCACGC TERM 1514 1744535 - 1744556 + g 87 -14.5 -3.60475 | opp_overlap 1744531 1744530, overlap 1744539 GTGCGCGAAATGCCA TGCCGTTGC AACT GCAACGGCA TTTGCGATGCAACTT TERM 1515 1744760 - 1744703 - R 89 -17.1 -3.06696 | overlap 1744753 1744754 TGGCCCCTGAACAGA CCGTGGTGCTTCGGC-GGACCGGCGGC TGCATC GTCGCCGATCCAGCC-AAACTCCACGG GCACGCGGGTGAAGA Bphy_4676 1745046 - 1744678 - | hypothetical protein Bphy_4677 1745528 - 1745055 - | hypothetical protein Bphy_4678 1745918 - 1745547 - | hypothetical protein Bphy_4679 1746778 - 1746197 - | TetR family transcriptional regulator TERM 1516 1746539 - 1746524 - G 70 -2.5 -4.66833 | TGCGAACGTGAAAAA CGACG TCAGCG CATCG TGTACATCGGGCTTG Bphy_4680 1748538 - 1746853 - | ATP dependent DNA ligase TERM 1517 1747342 - 1747355 + g 71 -9.5 -3.72893 | CATCAATCCTTCGAC GCCGC GTGC GCGGC TTTCGTCGCGCAATG TERM 1518 1748461 - 1748419 - G 72 -11.2 -3.44848 | overlap 1748417 1748422 GCCCGCCAGGAAATA CGACGCCCATGCCGCGTC TTCGGGC GGCGCGGCATGGAAGTAG GTGATCAGCGCGTCG Bphy_4681 1749587 - 1748535 - | putative exonuclease involved in mRNA processing TERM 1519 1749506 - 1749488 - G 71 -12.4 -3.28712 | GTGCGTGCGTGATAA CAGCCCGC TCG ACGGGCTG CCACGGATCGATATG TERM 1520 1749745 - 1749717 - R 100 -18.1 -4.21908 | overlap 1749736 GACCAGGACGCAAAA CGCCCCCGCGTCC GAT GAACGCCGGGGCG CCCGCGTGACAGCCG Bphy_4682 1750178 - 1749792 - | hypothetical protein TERM 1521 1750102 - 1750069 - G 83 -15.1 -3.26471 | CCATTGCCAGACGAA CCGCCGCCCGCGCCG TTAC CGCCGCCGGCGCCGG CACCCTGCGCGTACA Bphy_4684 1751007 - 1750651 - | hypothetical protein TERM 1522 1751224 - 1751234 + H 83 -8.2 -4.57073 | opp_overlap 1751224 1751223, overlap 1751197 GTACAAAGTGCAAAC CGCC GTT GGCG TTTTTACGCGGCATG Bphy_4685 1751360 - 1752307 + | ABC transporter related TERM 1523 1752968 - 1752997 + G 93 -4.9 -5.31519 | gap 1 GGCTCGCGGATGTCA GCGTCGGCAT-CAG TCT CGGCATGACGGCGC TTTTTCTTTGCATCT Bphy_4686 1752304 - 1753065 + | ABC-2 type transporter TERM 1524 1753131 - 1753105 - f 79 -13.7 -3.11634 | overlap 1753107 GCCGACATGAGGGAA GACTGAGGCGC CGTGC GCGCCCCAGCC GTTCGACATCGCAGC TERM 1525 1753129 - 1753107 - f 76 -12.7 -3.11768 | overlap 1753105 CGACATGAGGGAAGA CTGAGGCGC CGTGC GCGCCCCAG CCGTTCGACATCGCA Bphy_4687 1753177 - 1754406 + | histidine kinase TERM 1526 1754417 - 1754444 + T 83 -14.2 -3.06796 | opp_overlap 1754422, overlap 1754422 TCTAGCCGTCGATGC AAAAAGGCCGGG CATG CCCGGCCTTTTC TTCACTGCGCTGCCG TERM 1527 1754439 - 1754422 - T 100 -14.1 -4.65895 | opp_overlap 1754422 1754417 CCGTCGATGCAAAAA GGCCGGG CATG CCCGGCC TTTTCTTCACTGCGC TERM 1528 1754422 - 1754439 + T 100 -14.1 -4.67982 | opp_overlap 1754422, overlap 1754417 CCGTCGATGCAAAAA GGCCGGG CATG CCCGGCC TTTTCTTCACTGCGC Bphy_4688 1754591 - 1754466 - | hypothetical protein TERM 1529 1754619 - 1754645 + r 71 -12.3 -2.9244 | overlap 1754614 1754612 1754611 GTGTCGGACCTTATT TGGCGGATGCG AGCTG CGCGTCCGTCA TGTGATGCTTTTCGT Bphy_4689 1756017 - 1754614 - | major facilitator transporter TERM 1530 1755490 - 1755466 - G 70 -11.3 -3.35996 | CAGCGCGACGGACAA CGGTGCCGCGA TCA TCGCGCCGCCG CCGAAGCCCATGATC TERM 1531 1755701 - 1755717 + g 71 -4.4 -4.57341 | gap 1, overlap 1755704 GCCGCCGTGAACATC GTGCGGC GCGG GCCG-AC TTTTTCCAGCCACTT Bphy_4690 1756620 - 1756835 + | hypothetical protein Bphy_4691 1756843 - 1757544 + | GntR family transcriptional regulator TERM 1532 1757606 - 1757569 - T 100 -20 -3.7347 | opp_overlap 1757574, overlap 1757574 GGGAAGATTGAAGAA CAAAAGGCCGGCGGAC GGCGCA GTCCGCCGGCCTTTTT CATTTCACCTCGTCA TERM 1533 1757601 - 1757574 - T 100 -19.9 -4.91084 | opp_overlap 1757574, overlap 1757569 GATTGAAGAACAAAA GGCCGGCGGAC GGCGCA GTCCGCCGGCC TTTTTCATTTCACCT TERM 1534 1757574 - 1757601 + T 100 -19.9 -4.99134 | opp_overlap 1757569 1757574 GATTGAAGAACAAAA GGCCGGCGGAC GGCGCA GTCCGCCGGCC TTTTTCATTTCACCT Bphy_4692 1758455 - 1757619 - | succinyl-CoA synthetase, alpha subunit TERM 1535 1757804 - 1757794 - G 77 -4.6 -4.63218 | GTGCCCGCAATAAAA CCGA CCA CCGG CTTGTTCGTGCGCGA Bphy_4693 1759715 - 1758492 - | succinyl-CoA synthetase, beta subunit TERM 1536 1759657 - 1759676 + g 71 -10 -3.5594 | gap 1 GCGACGCGCCCGTTC GGC-ACGGC GAC GCCGTAGCC TTTCAACAGTGCCTT Bphy_4694 1760023 - 1761270 + | formyl-CoA transferase TERM 1537 1761864 - 1761836 - g 73 -9.6 -3.86897 | gap 1, overlap 1761790 GTCATCGGCGAGAAA CGCGCATC-TGGC GCAT GTCACGATGCGCG TGCGCAATCGTCAAC Bphy_4695 1761345 - 1761902 + | putative NAD(P) transhydrogenase, beta subunit Bphy_4696 1762248 - 1761991 - | hypothetical protein Bphy_4697 1763289 - 1762345 - | LysR family transcriptional regulator Bphy_4698 1763628 - 1764968 + | major facilitator transporter Bphy_4699 1765002 - 1766024 + | LysR family transcriptional regulator TERM 1538 1766905 - 1766930 + G 85 -8.1 -4.67982 | opp_overlap 1766905 1766906, overlap 1766906 CGCGAATATCGACAA CGCCGTGCGCG CGGC CGCGTCCGGCA TTTTCTTCAATACGG TERM 1539 1766906 - 1766929 + G 70 -11.6 -3.40307 | opp_overlap 1766906 1766905, overlap 1766905 GCGAATATCGACAAC GCCGTGCGCG CGGC CGCGTCCGGC ATTTTCTTCAATACG Bphy_4700 1766093 - 1767544 + | aldehyde dehydrogenase TERM 1540 1767561 - 1767590 + T 90 -12.3 -4.25104 | opp_overlap 1767567, overlap 1767567 ACAGGCGTCGCCATG AAAAAAGCGGATC GCGC GATCCGCTTTTTC TTTTCATACGGCCAC TERM 1541 1767584 - 1767567 - T 100 -11.3 -5.14563 | opp_overlap 1767561 1767567 GTCGCCATGAAAAAA GCGGATC GCGC GATCCGC TTTTTCTTTTCATAC TERM 1542 1767567 - 1767584 + T 100 -11.3 -5.50723 | opp_overlap 1767567, overlap 1767561 GTCGCCATGAAAAAA GCGGATC GCGC GATCCGC TTTTTCTTTTCATAC Bphy_4701 1768245 - 1767622 - | lysine exporter protein LysE/YggA TERM 1543 1767799 - 1767787 - G 75 -9.1 -3.99324 | overlap 1767772 TTCGAGCACGAGAAA GCTCG CGC CGAGC ACGGCGAACTGCGGC TERM 1544 1768370 - 1768345 - R 100 -16.1 -3.66874 | GTAATTGTAGCGAAA CGCCAGCCGCC CCTG GGCGGCTGCCG AAAAGCGCGCGCCGC Bphy_4702 1768994 - 1768437 - | hypothetical protein Bphy_4703 1769013 - 1769384 + | hypothetical protein Bphy_4704 1769547 - 1770968 + | hypothetical protein Bphy_4705 1771161 - 1771412 + | transglycosylase-associated protein Bphy_4706 1772299 - 1771439 - | polysaccharide deacetylase TERM 1545 1771716 - 1771764 + g 93 -17.3 -3.5594 | opp_overlap 1771745 TCGAGAAACAGGTTG CGCAGGCCGGCGGGCGCGCGG AAGAACA TCGGGCGCTCGCCGGTCAGTG TTTCGAGCGTGCGTT TERM 1546 1771960 - 1771934 - G 83 -5.9 -4.87665 | overlap 1771935 1771936 GCCGATGCAGAAAAA CGTCG-CGCGCAC GCC ATGCGCGTCGA-G CAGGTCGAGCACCTG TERM 1547 1772390 - 1772357 - H 77 -13.9 -2.87344 | overlap 1772364 GACTTTCTTGATACA CGTCAAACGCGAACG ATAC CATTCGCGCGTGACG CGTCTCGAAACGGGG TERM 1548 1772383 - 1772364 - H 75 -10 -3.65425 | overlap 1772357 TTGATACACGTCAAA CGCGAACG ATAC CATTCGCG CGTGACGCGTCTCGA Bphy_4707 1772487 - 1773371 + | LysR family transcriptional regulator Bphy_4708 1773494 - 1774744 + | D-amino-acid dehydrogenase TERM 1549 1774812 - 1774796 - g 70 -2.1 -4.68655 | overlap 1774798 1774799 1774806 CAACTTGAAAACAAA CATCGCA AAG TGCGCGG CATTCGTCGCATGGG TERM 1550 1774921 - 1774880 - g 70 -2.2 -4.59773 | opp_overlap 1774884, overlap 1774883 CGCGACGCTGAAAAA GATCCGCGAAACGGGC-GCG ATTT CGCTGGGCGTG-CGCGAATC GTCGGTGCCGTTTTC Bphy_4709 1774785 - 1775684 + | extracellular solute-binding protein TERM 1551 1776038 - 1776016 - g 71 -10.4 -3.61398 | CGTGCTGTTCAACAA CGCGGGGCGC AAT GCGCCGCCCG TCGAAATCGACCAGA Bphy_4710 1775732 - 1776508 + | short-chain dehydrogenase/reductase SDR Bphy_4711 1776625 - 1776840 + | hypothetical protein TERM 1552 1777041 - 1777020 - g 75 -7.9 -4.26076 | CTATCGCGACGAAAA CGGCGAATG GAAA CGCTCGCCG CCCATTACGCTGCAG TERM 1553 1777522 - 1777488 - g 76 -9.3 -4.07568 | gap 1 GTTCTTCGGCGAAAA CGTGCCGAAGCCGC GCGTCGAA GCGGCGTCG-CACG CGCTCGATGCCGCTG Bphy_4712 1776847 - 1777734 + | silent information regulator protein Sir2 Bphy_4713 1777779 - 1778384 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Bphy_4714 1778391 - 1779005 + | hypothetical protein TERM 1554 1779217 - 1779159 - f 74 -11 -3.55444 | gap 3, opp_overlap 1779197 CCCGCAGTGTCGAAA GCCAGCACGCAC-CGCCCATGCCCGTCAT GAGC ATGACGGGCG-GGGAGTACGCGAGC-GGC ATCCCGTCATTTCTT TERM 1555 1780240 - 1780253 + G 71 -8.1 -4.07687 | AGGTGCTGGAAGGCC CGGCT GCGA AGCCG TTTTCCGGCGACCGT TERM 1556 1780547 - 1780604 + G 71 -14.2 -2.77235 | gap 2, opp_overlap 1780526, overlap 1780529 1780561 1780572 GGCGCTGCGCGACGT CGTGATCGC-GGCGACGACGGCGG-GCG TGCC CGTGCCGGCGTTCTCGTCGGCGATCGCG TACTTCGATGGTTAC Bphy_4715 1779321 - 1780730 + | 6-phosphogluconate dehydrogenase, decarboxylating TERM 1557 1780779 - 1780819 + F 91 -16.9 -3.55444 | opp_overlap 1780785, overlap 1780780 1780785 CGGGGTTCGTGAAGG TCAAAACGCCCCGGCAC CCGCATC GCGCCGGGGCGTTTTGC TTTGCGCGGTCCGCC TERM 1558 1780780 - 1780818 + F 100 -20.4 -2.73124 | opp_overlap 1780785, overlap 1780779 1780785 GGGGTTCGTGAAGGT CAAAACGCCCCGGCAC CCGCATC GCGCCGGGGCGTTTTG CTTTGCGCGGTCCGC TERM 1559 1780785 - 1780813 + F 100 -14.5 -4.54727 | opp_overlap 1780785, overlap 1780780 1780779 TCGTGAAGGTCAAAA CGCCCCGGCAC CCGCATC GCGCCGGGGCG TTTTGCTTTGCGCGG TERM 1560 1780813 - 1780785 - f 100 -16.7 -4.19238 | opp_overlap 1780780 1780779 1780785 TCGTGAAGGTCAAAA CGCCCCGGCAC CCGCATC GCGCCGGGGCG TTTTGCTTTGCGCGG Bphy_4716 1781066 - 1781386 + | hypothetical protein TERM 1561 1781492 - 1781462 - T 100 -16.9 -4.90217 | opp_overlap 1781464, overlap 1781464 CAAACAGAGTAAAAA GACGCCCGTCAGG TCGAC CCTGACGGGCGTT TTTTTCATTCCCTTT TERM 1562 1781490 - 1781464 - T 100 -19.5 -4.04813 | opp_overlap 1781464, overlap 1781462 AACAGAGTAAAAAGA CGCCCGTCAGG TCGAC CCTGACGGGCG TTTTTTTCATTCCCT TERM 1563 1781464 - 1781490 + T 100 -19.5 -5.64006 | opp_overlap 1781462 1781464 AACAGAGTAAAAAGA CGCCCGTCAGG TCGAC CCTGACGGGCG TTTTTTTCATTCCCT TERM 1564 1781556 - 1781527 - T 74 -2.7 -5.02074 | overlap 1781545 CCAGCCTGGAAAAAA GACACGCGCAACT GAAG AGATTCGCCCGTC GCATCAGCGCGGAAT Bphy_4717 1782303 - 1781560 - | hypothetical protein TERM 1565 1782308 - 1782260 - G 79 -10.2 -4.07568 | opp_overlap 1782266 TGTCGCGGCGGAAAA TGAAGGTGCGCCGCTGCACCAT TGCCG ACGGCGGCGCGGCGCATGTTCA AAAGATTTTTCACGA Bphy_4718 1782696 - 1782376 - | hypothetical protein Bphy_4719 1782936 - 1783247 + | cupin domain-containing protein TERM 1566 1783650 - 1783685 + G 100 -20.5 -3.50572 | GCCTACCGGACGACT CCCGGCGGCGC-CGCCG CCAG CGGCGTGC-CCGCCGGG TTCTATCGGGTGAAT TERM 1567 1784007 - 1784028 + G 70 -13.7 -2.62184 | gap 1, opp_overlap 1783971 CCCGGCGATCAGGTG CGCGCCGCCG CGA CGG-GGCGCG TGGTCTACGCGGGCA Bphy_4720 1783521 - 1784267 + | peptidase M23B Bphy_4721 1786119 - 1784476 - | putative natural resistance-associated macrophage protein TERM 1568 1786513 - 1786493 - H 78 -9 -4.11216 | opp_overlap 1786479 1786503 GGTTGATGGGTAAAA CGCATCGC CATTT GCGATACG CACGTCTATGGGGTG Bphy_4722 1786526 - 1786783 + | hypothetical protein TERM 1569 1787723 - 1787758 + G 71 -12.5 -3.29144 | opp_overlap 1787739, overlap 1787754 TTGCAGTGCTGGCCG TCACGGGCGTGACGA ACGTGG TCGCCGCGCCCGCGA TTCTCGCGGCGCTCG TERM 1570 1788363 - 1788383 + G 78 -3.2 -4.86385 | gap 1 GCATTACAACTGGGC GCTGT-GCG TGTT CGCGACCGC TTTCTTTTTCGCGAT TERM 1571 1788602 - 1788616 + G 82 -5.6 -4.82901 | overlap 1788594 GCGATCCCGTGCGTG TCGGCG GCA CGGCGA TTTTTCTCACACCGA Bphy_4723 1787131 - 1789053 + | K potassium transporter Bphy_4724 1789505 - 1789359 - | hypothetical protein Bphy_4725 1790366 - 1789650 - | LmbE family protein TERM 1572 1790063 - 1790094 + g 79 -14.5 -3.04144 | gap 1 CTTCTTCCAGCGCGG CGGCGAGCTTGCCG ATCGA CGGCGAG-TCGCCG TATTGCGCGTCGCGA Bphy_4726 1791121 - 1790534 - | hypothetical protein Bphy_4727 1793664 - 1791451 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Bphy_4728 1794671 - 1793661 - | molybdopterin dehydrogenase FAD-binding Bphy_4729 1795463 - 1794684 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 1573 1795728 - 1795750 + r 100 -19.2 -4.18494 | opp_overlap 1795728 GCATCAAATAAAAAA CGCGCGTCGA AGC TCGACGCGCG TTTTACCTGAAGCTG TERM 1574 1795750 - 1795728 - R 100 -19.2 -5.68438 | opp_overlap 1795728 GCATCAAATAAAAAA CGCGCGTCGA AGC TCGACGCGCG TTTTACCTGAAGCTG Bphy_4730 1797084 - 1795792 - | aspartate carbamoyltransferase TERM 1575 1796862 - 1796877 + g 71 -4 -4.57569 | gap 1, overlap 1796856 1796863 CGAGCGACTGCGAAT C-TACGC TTT GCGTATG TTTTTCGGCGGGTGC TERM 1576 1797370 - 1797324 - H 81 -2.9 -5.22039 | gap 1, opp_overlap 1797334 1797347 1797348, overlap 1797326 TCCAAAGCCAAAAAA CAGTTGCTCATCTGACCGGAGC TGCT GTTCCG-TCAGATTTGCGACGG AACAGTCTTATCCAG TERM 1577 1797348 - 1797375 + H 71 -11.4 -3.21276 | opp_overlap 1797326 1797324, overlap 1797334 1797347 ATCTGACCGGAGCTG CTGTTCCGTC AGATTTGC GACGGAACAG TCTTATCCAGCCCGG Bphy_4731 1797467 - 1798330 + | dihydrodipicolinate synthase TERM 1578 1798380 - 1798405 + F 83 -8.2 -4.58395 | overlap 1798382 AGATGCGGCTCTGGG GAGTGGCGTG ATAATG CGCGCCACCC TTTTTCCGACATCCA TERM 1579 1799025 - 1798976 - g 85 -11.9 -4.11394 | gap 1, overlap 1798979 ATGGCATGCCGAAAA GAGCGCAGGCGGC-CGCACTGCCG GTC CAGCGGGGCGCGCAGCCCGCGGCC GATGAGAAACGCGAT TERM 1580 1799022 - 1798979 - g 73 -14.4 -2.79004 | gap 1, overlap 1798976 GCATGCCGAAAAGAG CGCAGGCGGC-CGCACTGCCG GTC CAGCGGGGCGCGCAGCCCGCG GCCGATGAGAAACGC Bphy_4732 1798555 - 1799739 + | peptidase M23B Bphy_4733 1799732 - 1800103 + | hypothetical protein Bphy_4734 1800105 - 1800587 + | hypothetical protein Bphy_4735 1802687 - 1800618 - | diguanylate cyclase/phosphodiesterase Bphy_4736 1803336 - 1802902 - | rhodanese domain-containing protein Bphy_4737 1803435 - 1804400 + | AraC family transcriptional regulator TERM 1581 1804627 - 1804614 - g 78 -8.1 -4.37711 | overlap 1804595 1804616 CGAGCAAATGGAAAA GTGGC TCGC GCCAC ACGCGTTCCAGCCGG Bphy_4738 1804543 - 1805457 + | putative exonuclease RdgC TERM 1582 1805479 - 1805490 + T 78 -3.6 -5.00616 | opp_overlap 1805487 ATTTTTTGTTTGCGA CGCC ACAA GGTG TTTTTTGCCGCAGGC Bphy_4739 1805762 - 1805541 - | hypothetical protein TERM 1583 1805716 - 1805733 + g 79 -2.7 -5.093 | gap 1 TTCAACAACGTGGGA GACG-GTT TCC AGCGCGTC TTTTCTTCTTTTGGC Bphy_4740 1806766 - 1805858 - | extracellular solute-binding protein Bphy_4741 1807406 - 1806981 - | hypothetical protein TERM 1584 1807028 - 1807055 + g 86 -14.8 -3.54459 | overlap 1807012 1807051 1807052 GACGCGGCGCAACTT CGCCGCCCCGGT TGTC GTCGGGGTGGCG TTTGCACGCCGTTGC Bphy_4742 1808032 - 1807427 - | hypothetical protein TERM 1585 1808885 - 1808872 - R 70 -4.5 -4.53685 | gap 1 AAACCAGAAGCAAAA CGC-GG ATG CCAGCG GAAGCAAATCGCGGA Bphy_4743 1811268 - 1808968 - | oxidoreductase alpha (molybdopterin) subunit TERM 1586 1809514 - 1809485 - G 79 -5.8 -4.66833 | overlap 1809487 TTGTAATCGTAAAAA CCGTCGAT-CGACC ATTC GATCGCATCG-CGG ATCTTCGCGTAATCG TERM 1587 1812284 - 1812261 - g 100 -3.1 -5.86061 | opp_overlap 1812278 GCCGACGAAAAAAAA CGCGAAC TCGTGAAGCT GCTCGCG CGGCACGACGTTCCC Bphy_4744 1811460 - 1812887 + | transcriptional regulator Bphy_4745 1812921 - 1813229 + | transcriptional regulator Bphy_4746 1813878 - 1815389 + | tyrosinase TERM 1588 1815443 - 1815416 - f 76 -12.8 -3.05343 | CGCACACGCGGAATA CGTCGGTCCA ATGTTCTG TGGACCGACG CGCGACATCCTGCAA TERM 1589 1815506 - 1815473 - f 81 -12.3 -3.75193 | overlap 1815467 AATCACACATCCAAA CCAGGGGGTTCGGCG CATG CGCCGCAAGCCCTGG CAATCGCTCGCCTTG TERM 1590 1815858 - 1815875 + G 78 -3.3 -4.87291 | gap 1, opp_overlap 1815836 1815833, overlap 1815860 CGCGATTACGTCACG CG-CACGC TCG GCGAGTCG TTTTTGATTCCGCTG Bphy_4747 1815489 - 1816520 + | hypothetical protein TERM 1591 1816883 - 1816839 - g 77 -15.1 -2.88544 | gap 3, opp_overlap 1816863 1816864 CGCCAGTTCCACAGA TGGCGCGCGCGGC-GCG-GTCC ACAC GGACGCGCGGCCGC-CGCGCGA AAGCGCTCGCCGCAT TERM 1592 1817485 - 1817444 - g 100 -7.1 -5.40072 | gap 1, overlap 1817446 TGGCTCGCAAAAAAA GGCGG-GGCACGGCATGCGA ATT TCGCGTCGCGCGCTGCCGCC GTCGACGGCGAGCTG TERM 1593 1818066 - 1818086 + G 74 -10.3 -3.70902 | AGCGGGCTTTCGATC CGCCGTCCG GCT CGGGCGCCG TTTGCATCTCCGGGC Bphy_4748 1816817 - 1818652 + | ABC transporter related Bphy_4749 1821025 - 1818680 - | PAS/PAC sensor hybrid histidine kinase TERM 1594 1819017 - 1818993 - G 81 -15.9 -2.98942 | ATTGCTTCAGAGAGA TTCTCATCGTC GTC GACGATGAGAA TGCGCAGCGGCGTCG TERM 1595 1819249 - 1819234 - G 70 -6 -4.25104 | overlap 1819210 TGCGCGGCAGCAAAA GCGTCG CTTG CGCCGC CATGTCGGTGCTGCG TERM 1596 1821062 - 1821106 + H 76 -13.6 -2.72344 | opp_overlap 1821085 1821086 TCTGGTTTCAGCGTG CGCGCATC-GCGCGGGCAGC AAAATCC GC-GCCCGCTCCGGTGCGCG TCATTCAGCGTCACG Bphy_4750 1821215 - 1822081 + | short-chain dehydrogenase/reductase SDR Bphy_4751 1822393 - 1822857 + | hypothetical protein Bphy_4752 1824535 - 1823102 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 1597 1823376 - 1823396 + g 70 -2.5 -4.62069 | opp_overlap 1823377, overlap 1823377 1823378 TCAGGCCTCGACATG ATGTGTGCG CGC TGCACATAG TTTTTCAGCTCGCGC Bphy_4753 1825963 - 1824755 - | alcohol dehydrogenase TERM 1598 1825013 - 1824977 - G 88 -8.7 -4.62471 | TCCAATCGGGAAAAA GCGGTCATTCATCGG ATACACA CCGATGACCGACAGC GTTCCCGCCTTGGCG Bphy_4754 1825981 - 1826424 + | hypothetical protein Bphy_4755 1826843 - 1826496 - | GCN5-related N-acetyltransferase TERM 1599 1826978 - 1826967 - R 86 -5.8 -5.04597 | ACTGAGATATAAAAA GACG AAAT CGTC TGCACGTTCAGGGCG Bphy_4756 1827618 - 1826986 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding Bphy_4757 1827844 - 1829031 + | hypothetical protein Bphy_4758 1830855 - 1829050 - | Na/Pi-cotransporter II-related protein Bphy_4759 1831679 - 1831068 - | NUDIX hydrolase TERM 1600 1831392 - 1831405 + g 70 -5.9 -4.2461 | opp_overlap 1831385 1831381, overlap 1831393 GTAATCGATGCGCAG TGCGC ATAG GCGCG TTTCTTCCTGCAACT Bphy_4760 1832186 - 1831761 - | CBS domain-containing protein Bphy_4761 1832466 - 1833236 + | short-chain dehydrogenase/reductase SDR Bphy_4762 1833233 - 1833880 + | phasin family protein Bphy_4763 1835182 - 1833941 - | hypothetical protein Bphy_4764 1836767 - 1835724 - | hypothetical protein Bphy_4765 1837298 - 1837011 - | hypothetical protein TERM 1601 1837163 - 1837176 + g 74 -2.3 -4.75518 | overlap 1837164 CGTCGGGTTCGACGC TGACG TCGC CGTCC TTTTGATTTTCTCTG Bphy_4766 1838450 - 1837326 - | glycosyl transferase group 1 Bphy_4767 1838808 - 1838527 - | hypothetical protein Bphy_4768 1839164 - 1838949 - | hypothetical protein Bphy_4769 1839685 - 1839161 - | hypothetical protein Bphy_4770 1840665 - 1839799 - | putative transport protein, YfdC-like protein Bphy_4771 1841056 - 1840763 - | hypothetical protein Bphy_4772 1841329 - 1843284 + | DNA ligase D Bphy_4773 1843995 - 1843423 - | hypothetical protein Bphy_4774 1846388 - 1844106 - | oxidoreductase alpha (molybdopterin) subunit TERM 1602 1844298 - 1844324 + g 82 -6.4 -4.70659 | overlap 1844300 1844315 GATCGTTTGCAGCGT CACCTTCTGCCC TTC GTGCAGACGGCG TTTTTCGATGTCCGC TERM 1603 1844467 - 1844525 + g 75 -7.3 -4.20806 | gap 1, overlap 1844507 GCTTCGGGCACCTTC TCCGGCATGTCGGGA-TCTTCGCCCAAC GAAT GCGGCGTGAGGAATTCCGCCTTGCCGGA TTTCGTTTTCCACTC Bphy_4775 1846464 - 1847168 + | cytochrome bd ubiquinol oxidase subunit I Bphy_4776 1847171 - 1847827 + | hypothetical protein TERM 1604 1848313 - 1848325 + G 76 -9.1 -4.07568 | overlap 1848307 ACCGGCTTCGCGATG GCAGC ATC GCTGC TTTTACGGAGACGCG Bphy_4777 1847937 - 1848440 + | CinA domain-containing protein TERM 1605 1848454 - 1848474 + F 81 -12.5 -3.53012 | overlap 1848455 GATCCTGCCGCGCGA TGTCGGGCG GCC CGCCCGGCG TTTCGGGCAGCAGCG TERM 1606 1848455 - 1848473 + F 76 -13.8 -2.71712 | overlap 1848454 ATCCTGCCGCGCGAT GTCGGGCG GCC CGCCCGGC GTTTCGGGCAGCAGC Bphy_4778 1848547 - 1849413 + | NAD+ synthetase Bphy_4779 1849825 - 1849478 - | hypothetical protein Bphy_4780 1849957 - 1850508 + | hypothetical protein Bphy_4781 1850591 - 1851046 + | response regulator receiver protein Bphy_4782 1851214 - 1851495 + | hypothetical protein TERM 1607 1852656 - 1852679 + G 71 -7.4 -4.17762 | gap 1, overlap 1852657 TTCGAGCGGGCAACC GTCGACC-CGC ATC GCGTGGTCGAA TTCTTTTCCGCGCTG Bphy_4783 1851558 - 1852997 + | putative circadian clock protein, KaiC Bphy_4784 1853016 - 1853411 + | response regulator receiver protein TERM 1608 1853434 - 1853458 + F 71 -7.1 -4.23758 | GTGCCTTGTTGTGTC GGAGCATGTGT GCA GCGCGTGTTCC TTTTCAGTGTCAGCT Bphy_4785 1853501 - 1853857 + | response regulator receiver protein Bphy_4786 1853917 - 1855488 + | PAS/PAC sensor signal transduction histidine kinase Bphy_4787 1855849 - 1855508 - | hypothetical protein Bphy_4788 1856419 - 1855904 - | hypothetical protein TERM 1609 1855975 - 1856002 + g 71 -10.4 -3.57144 | opp_overlap 1855974 CGGAAGGGACTGAAG GCGCCGCGGCGC GCTT GCGCTCAGGCGC TTTGCCGGTACGGCG TERM 1610 1856442 - 1856464 + r 86 -6.3 -4.92757 | gap 2, opp_overlap 1856393, overlap 1856445 GGCCCGCTCGAGCAT CGAGCCTGGCG GAG CGC-AGGC-CG TTTTCTTCTTCGTCG Bphy_4789 1856610 - 1856419 - | hypothetical protein Bphy_4790 1856890 - 1856693 - | hypothetical protein TERM 1611 1858439 - 1858494 + G 88 -15.4 -3.30124 | gap 1, opp_overlap 1858477, overlap 1858440 TCACGGCCGACGATC TGCGCGCGGTCGTCGCG-TGGTTGGGG ACG CTCCAATGAGCGCGACGGGCTCGCGCG TTGTGAGCGATCAGA TERM 1612 1858440 - 1858493 + G 81 -16.7 -2.57931 | gap 1, opp_overlap 1858477, overlap 1858439 CACGGCCGACGATCT GCGCGCGGTCGTCGCG-TGGTTGGGG ACG CTCCAATGAGCGCGACGGGCTCGCGC GTTGTGAGCGATCAG Bphy_4792 1857412 - 1858476 + | cytochrome c oxidase, subunit II TERM 1613 1859565 - 1859591 + G 78 -4.3 -4.77036 | GCCACGCTGCTGACC GGGCGGCTC AATCTGAAA GTGCCGCTC TTTTTCGTACTGGCG Bphy_4793 1858473 - 1861097 + | cytochrome c oxidase, subunit I TERM 1614 1861333 - 1861348 + G 78 -10.4 -3.94634 | GGACAACACCATTCC CGCTGC CCAA GCAGCG TTCTTTCCGCTGATG Bphy_4794 1861094 - 1861444 + | hypothetical protein TERM 1615 1861736 - 1861765 + G 91 -7 -5.00616 | overlap 1861737 TTGCGCTCGCGCTGT TCTCGCCGCTCG ACACGC TGAGCGGCGCGC TTTTTTCGGCGCACA TERM 1616 1861737 - 1861764 + G 71 -10.5 -3.60048 | overlap 1861736 TGCGCTCGCGCTGTT CTCGCCGCTCG ACACGC TGAGCGGCGCG CTTTTTTCGGCGCAC TERM 1617 1861837 - 1861893 + G 84 -17.1 -2.87132 | CTCGTGGCGGGCCGC CCGCTCGGCGTCTGGATGTGGGCGTTG CCC CGGCGCGCGCGTTCGGCGGCCGGGCGG TGTGTGAGAGCGCAC Bphy_4795 1861441 - 1862409 + | hypothetical protein TERM 1618 1862987 - 1862944 - g 71 -13.9 -2.71712 | gap 2, opp_overlap 1862980, overlap 1862943 CGTTCGCGCCGAAAG GCGTGTACCAGCCGCGCGCCG GGCG CGACGCGCAG-TGGAAC-CGC GGTGCCTATCTGGTG Bphy_4796 1862406 - 1863728 + | gluconate 2-dehydrogenase (acceptor) Bphy_4797 1865507 - 1863735 - | ATP-dependent DNA helicase RecQ TERM 1619 1864199 - 1864236 + g 74 -11.3 -3.61398 | gap 1, opp_overlap 1864174 GGTTGCGCTTCACGA GCTGCGCGTCGAGCATGA TCT TCA-GCGCGACCTGCAGC TTGTTGCCGCCGACG Bphy_4798 1866467 - 1865565 - | catalase Bphy_4799 1866638 - 1867000 + | hypothetical protein Bphy_4800 1867605 - 1867078 - | hypothetical protein TERM 1620 1867299 - 1867315 + g 81 -12.3 -3.86995 | CATTGAGCTTCAGAT GGACAGC CAC GCTGTCC TTGTTCTGGCTTTGC TERM 1621 1867675 - 1867690 + r 77 -11.8 -3.53811 | GACTGCCCGTGTGTT GCCGCG GCGG CGCGGC TTTCGAGGCGGTCAG TERM 1622 1867885 - 1867905 + r 84 -12.5 -3.70307 | opp_overlap 1867887, overlap 1867883 GGTGTTGTTTTGAAC GAGGCCCGC ATT GCGAGCCTC TCTTTGTTCCATCGG Bphy_4801 1869103 - 1867934 - | alcohol dehydrogenase Bphy_4802 1869354 - 1869151 - | hypothetical protein Bphy_4803 1870492 - 1869791 - | hypothetical protein TERM 1623 1869939 - 1869978 + g 81 -11.4 -4.053 | gap 1, opp_overlap 1869957 GCCGCGAAGGAGTAC CAGCTGGCCCTCGCAACAC CGC GTGCTGCG-GTGTCGGCTG TTTGTCTGGCCTGCT TERM 1624 1870883 - 1870920 + G 71 -9.1 -3.68988 | gap 1, overlap 1870885 1870886 TCGAAATGTTCGGCT GATCG-CGCTCGGCGCAG CGC TTGCGTCGAGCGGCGCTA TTCTGTTCGGTCGCG TERM 1625 1870885 - 1870918 + G 70 -11.7 -3.42482 | gap 1, overlap 1870883 1870886 GAAATGTTCGGCTGA TCG-CGCTCGGCGCAG CGC TTGCGTCGAGCGGCGC TATTCTGTTCGGTCG TERM 1626 1870886 - 1870917 + G 74 -15.2 -2.65007 | gap 1, overlap 1870885 1870883 AAATGTTCGGCTGAT CG-CGCTCGGCGCAG CGC TTGCGTCGAGCGGCG CTATTCTGTTCGGTC TERM 1627 1871039 - 1871052 + G 83 -5.9 -4.86293 | CCGTATCTGGGTGCG CGGCG GGTA TGCCG TTTTCCTTTTTATTG Bphy_4804 1870848 - 1871324 + | pyrrolo-quinoline quinone Bphy_4805 1872631 - 1871492 - | hypothetical protein TERM 1628 1871537 - 1871517 - G 82 -6.8 -4.60797 | overlap 1871533 CTCTCAGATAGAAAA CGCGACGC GAACA GCATCACG AACGTGAGGATCGCA TERM 1629 1872655 - 1872712 + r 82 -14.7 -2.87553 | gap 1, opp_overlap 1872651, overlap 1872655 GCCGGAACGGAGTGC GGCGCTAGCGCGTCG-CGATTGCGGCCG CGG CGCCCGCCATCATCGCCGCGCTGGTGCG GTTTGCGATTTTTAC TERM 1630 1872655 - 1872713 + r 72 -8.7 -3.8046 | gap 2, opp_overlap 1872651, overlap 1872655 GCCGGAACGGAGTGC -GGCGCTAGCGCGTCG-CGATTGCGGCCG CGG CGCCCGCCATCATCGCCGCGCTGGTGCGG TTTGCGATTTTTACC Bphy_4806 1873270 - 1872659 - | lysine exporter protein LysE/YggA Bphy_4807 1873427 - 1873975 + | GCN5-related N-acetyltransferase TERM 1631 1873980 - 1874004 + T 100 -19.3 -3.21925 | opp_overlap 1873980 GCCACGAATGAAAAA CGCGGCGGGGA TGG TTCCCGCCGCG TTCCTGATGCGATCT TERM 1632 1874004 - 1873980 - T 100 -17.1 -4.90266 | opp_overlap 1873980 GCCACGAATGAAAAA CGCGGCGGGGA TGG TTCCCGCCGCG TTCCTGATGCGATCT TERM 1633 1874029 - 1874039 + T 80 -2.4 -5.26875 | overlap 1874013 CGATCTGCCGTGGCT GGCG TAG CGCG TTTTTTAGTTCACCG Bphy_4808 1875105 - 1874044 - | NADH:flavin oxidoreductase/NADH oxidase Bphy_4809 1875513 - 1875184 - | ArsR family transcriptional regulator TERM 1634 1875703 - 1875685 - R 79 -5.2 -4.82901 | CGTTTTGCACAAAAA GGCCTGAA CTT CTCATGCC ACATTATGAGATAAA Bphy_4810 1876648 - 1876217 - | hypothetical protein TERM 1635 1876473 - 1876457 - G 71 -4.4 -4.55295 | gap 1 CTCCGGATAAACAAA CCGACGC TGTG GC-TCGG ACCAGACGCCGAGGA TERM 1636 1877215 - 1877243 + H 75 -11.7 -3.18264 | opp_overlap 1877214 1877213 CGCCCCTGCACAAGG TCGTCGACGCCGA GCG TCAGCTTCGACGA TTCCTCGCTGGAACG TERM 1637 1877539 - 1877555 + H 77 -2.1 -5.03314 | overlap 1877541 TGATCGAGAACAGGG GAGGCTT GCC ATGCCCC TTTTTTGCGCATCAC Bphy_4811 1877679 - 1878113 + | hypothetical protein TERM 1638 1878340 - 1878330 - g 89 -5.4 -5.2189 | overlap 1878332 GCAACGAGCAAAAAA TACC CGT GGTA TCAGACACGCAACGG Bphy_4812 1878210 - 1879133 + | hypothetical protein Bphy_4813 1879256 - 1879501 + | hypothetical protein Bphy_4814 1879801 - 1879553 - | XRE family transcriptional regulator Bphy_4815 1879999 - 1880439 + | hypothetical protein Bphy_4816 1880522 - 1880689 + | hypothetical protein Bphy_4817 1881597 - 1880866 - | hypothetical protein TERM 1639 1880987 - 1880972 - G 80 -4.6 -4.7373 | overlap 1880973 CGAGCCCATGAAAAA TCGGCC TCAA GTCCGA GGTCGCGCACGAGCC TERM 1640 1881187 - 1881199 + g 72 -6.9 -4.25104 | overlap 1881196 GTCGCCGGACGGGAG GGGCT TGA GGCCC TTTTCGTAGGGCAGA TERM 1641 1881707 - 1881687 - H 72 -8.9 -3.93166 | CCCGGAAAAAATTAA TGGCCGCGC CCT GCACGGCGA TGTGGCTCGTATGCC TERM 1642 1881867 - 1881880 + G 71 -9.5 -3.70553 | CTGCCCAGTGCATTC GGGGC ACGC GCCCC TTATCTCTTGACTTC Bphy_4818 1881792 - 1882097 + | hypothetical protein TERM 1643 1882975 - 1882962 - T 75 -9.5 -3.92373 | opp_overlap 1882962 1882961 1882957, overlap 1882940 CATCTCATCGAGAAA CGCGC GCTT GCGCG TGCGCTTCGTTGCCT Bphy_4821 1884062 - 1883277 - | hexapaptide repeat-containing transferase TERM 1644 1883450 - 1883466 + g 70 -2.1 -4.64144 | overlap 1883451 CGGTTATCAATGCCC CTGCGCC CAC GACGCAA TTTTTCCCAATTATT TERM 1645 1883762 - 1883751 - G 70 -5.8 -4.258 | overlap 1883753 CGAGTCAGCAACAAA CACG CTCT CGTG AACGGTAGGGATTGC Bphy_4822 1884177 - 1885250 + | beta-lactamase domain-containing protein Bphy_4823 1885618 - 1886064 + | thioesterase superfamily protein Bphy_4824 1886098 - 1886784 + | TetR family transcriptional regulator Bphy_4825 1887587 - 1887183 - | endoribonuclease L-PSP TERM 1646 1888187 - 1888175 - g 74 -4.7 -4.56597 | opp_overlap 1888139 1888138 CTTTTCGCTTAAAAA GCCGG GCA CCGTC GCAGCACGCTATTGC TERM 1647 1888565 - 1888538 - g 95 -15 -3.98745 | gap 1, opp_overlap 1888525 1888524, overlap 1888539 CAAGCAGGCAAATAA GCCCGACCTCGTT ATC AACGAGGTC-GGC ATGCTCGCTGCAATT TERM 1648 1888565 - 1888539 - g 79 -15.2 -2.98524 | opp_overlap 1888525 1888524, overlap 1888538 AAGCAGGCAAATAAG CCCGACCTCGTT ATC AACGAGGTCGGC ATGCTCGCTGCAATT Bphy_4826 1887960 - 1888775 + | citrate synthase TERM 1649 1888778 - 1888825 + T 85 -10.4 -4.28774 | gap 1, overlap 1888764 1888762 1888779 CGGTTGGCGCTAGTC GGCTGCCGTCTGCCCGGCCTGTC TTT GACGGTCCGGGCATTCG-CGGCG TTTTCCCTTCCGTCG TERM 1650 1888779 - 1888824 + T 79 -13.9 -3.16783 | gap 1, overlap 1888764 1888762 1888778 GGTTGGCGCTAGTCG GCTGCCGTCTGCCCGGCCTGTC TTT GACGGTCCGGGCATTCG-CGGC GTTTTCCCTTCCGTC TERM 1651 1888992 - 1889047 + T 89 -16.3 -3.44924 | opp_overlap 1888990, overlap 1888991 AGTCTAGCAATGATG TGTGTTCAATTCGTACACCAGGCGA TATAAC TCGCCCGGTGTATGAATCGGTCACA TGTTTGGATAATTTG Bphy_4827 1890710 - 1889043 - | electron-transferring-flavoprotein dehydrogenase TERM 1652 1889161 - 1889181 + g 75 -3.9 -4.59853 | overlap 1889162 TGTGCATTGATCTGC AGACGATCG CTG CCATCGTCG TTTTTAACAAATTCG TERM 1653 1890450 - 1890467 + g 85 -4.7 -5.07486 | overlap 1890452 GTCTTCCGTCACTTC GACGTCC AGAG GGGCGCC TTTTTCTTCCCAGTC Bphy_4828 1891795 - 1890857 - | electron transfer flavoprotein alpha subunit TERM 1654 1891568 - 1891580 + g 76 -9.1 -4.07687 | TGCAATGCGCAGTAC CGTCG CTT CGACG TTTTCCGCGAGACCT Bphy_4829 1892573 - 1891824 - | electron transfer flavoprotein alpha/beta-subunit TERM 1655 1893537 - 1893526 - g 70 -5.8 -4.27316 | overlap 1893527 GGGTGCAATGGAAAA GCTG CCGG CAGC AGAGCTCGTTCTGTG TERM 1656 1893812 - 1893800 - g 81 -3.3 -5.05782 | overlap 1893801 ATGCAGTCGAAAAAA GCGGA GAT TCCGA CACTTACCGCTTCCG Bphy_4830 1893191 - 1893982 + | electron transfer flavoprotein alpha/beta-subunit Bphy_4831 1893982 - 1894959 + | electron transfer flavoprotein alpha subunit Bphy_4832 1894975 - 1896489 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bphy_4833 1896546 - 1897703 + | FAD dependent oxidoreductase TERM 1657 1898139 - 1898129 - g 84 -8.2 -4.53034 | overlap 1898130 1898131 CGGAGACAACCAAAA CCCG CCG CGGG GCAAGCTGATGAACA Bphy_4834 1898090 - 1898899 + | regulatory protein GntR HTH Bphy_4835 1898905 - 1899606 + | hypothetical protein TERM 1658 1899624 - 1899663 + T 77 -13.6 -3.00476 | opp_overlap 1899623 1899622 TGATCCGCAACAACG GTTGGGCGGCACGGGG AAATTTCG CATCGTGTCGCCCAAC TCTGTGCTTAGCCGT Bphy_4836 1901095 - 1899671 - | aldehyde dehydrogenase TERM 1659 1902025 - 1902011 - g 81 -2.8 -5.00884 | AGTGGGCGCAAAAAA TGTCCA TGA CGAACA AGAAGAGTCAAGAGC Bphy_4837 1901647 - 1902762 + | 2-nitropropane dioxygenase NPD TERM 1660 1902784 - 1902826 + F 93 -11.3 -4.42386 | overlap 1902785 CGTAATAGATAGGCC TCGTACTGCCTCGTTTTCC TTTTC GGAAGGCGGGGCAGTGTGC TTTTGTAACTGCGAC TERM 1661 1902785 - 1902825 + F 86 -14.8 -3.2511 | overlap 1902784 GTAATAGATAGGCCT CGTACTGCCTCGTTTTCC TTTTC GGAAGGCGGGGCAGTGTG CTTTTGTAACTGCGA Bphy_4838 1903076 - 1904233 + | porin Bphy_4839 1904620 - 1905336 + | nitroreductase TERM 1662 1905443 - 1905461 + G 75 -3.1 -4.79752 | opp_overlap 1905432, overlap 1905435 GAATCTAGCGGGAGC TTGCTCG CTTTA CGAGGAA TTTTGTATTGTTGCC TERM 1663 1906436 - 1906422 - g 72 -8.6 -4.07568 | GCGCCGGGTGCAAAA GTCAAG TTT CTTGAC AACGAAGGAAGAGAG Bphy_4840 1905420 - 1906988 + | AMP-dependent synthetase and ligase Bphy_4841 1907046 - 1907810 + | enoyl-CoA hydratase/isomerase TERM 1664 1908400 - 1908446 + G 70 -11.2 -3.33261 | overlap 1908401 GGATCTCAGTCGTTC CGCCGGCGGGTCCAGTGGCGGC GCT GCCGCCGCGGTTGCCGCCGGGA TTGTGCCGATTGCGC TERM 1665 1908401 - 1908445 + G 74 -14.7 -2.59742 | overlap 1908400 GATCTCAGTCGTTCC GCCGGCGGGTCCAGTGGCGGC GCT GCCGCCGCGGTTGCCGCCGGG ATTGTGCCGATTGCG TERM 1666 1908972 - 1908962 - g 74 -2.4 -4.84274 | overlap 1908964 CAATCAGAGGAAAAA TGGC GGA GCCG GCTCGAGCCAGCAAT Bphy_4842 1907957 - 1909387 + | amidase TERM 1667 1909445 - 1909420 - T 70 -11.7 -2.77962 | opp_overlap 1909414, overlap 1909419 GTTCATATGTGAAAC TGGCCGCCGTG TTGC CTCGGCGGCCT CGCTACATGTCGTCA Bphy_4843 1909832 - 1909602 - | rubredoxin-type Fe(Cys)4 protein Bphy_4844 1910042 - 1910944 + | hypothetical protein Bphy_4845 1911099 - 1911890 + | short-chain dehydrogenase/reductase SDR Bphy_4846 1912060 - 1912875 + | polysaccharide deacetylase Bphy_4847 1912926 - 1913420 + | dehydratase Bphy_4848 1913457 - 1914953 + | AMP-dependent synthetase and ligase Bphy_4849 1915183 - 1916262 + | tartrate dehydrogenase TERM 1668 1916294 - 1916319 + T 93 -12.5 -4.13654 | opp_overlap 1916294 AGTCGCGTGAATTGA GCCGCCAGCTT ACCA GAGCCGGCGGC TTTCTCATTTGCAGA TERM 1669 1916319 - 1916294 - T 74 -14 -2.52543 | opp_overlap 1916294 AGTCGCGTGAATTGA GCCGCCAGCT TACCAG AGCCGGCGGC TTTCTCATTTGCAGA TERM 1670 1916495 - 1916477 - T 100 -12.4 -4.9218 | opp_overlap 1916477 GATTGAGTAGAAAAA GGGGGCAA GCG TCGCCCCC TTGATCCATCCAGGT Bphy_4850 1917976 - 1916516 - | succinic semialdehyde dehydrogenase Bphy_4851 1919418 - 1918126 - | 4-aminobutyrate aminotransferase TERM 1671 1918751 - 1918716 - G 72 -6.8 -4.3129 | gap 1 CAGCTATCAGCAAAA TGCCGTGCTCATCGCAA AGT TTGCGCAGAGCTCG-CA CGAATTCGGCCGGAG TERM 1672 1919933 - 1919911 - g 72 -3.4 -4.71426 | overlap 1919927 TGGCGAGGAAGAAAA GCTGTCGT CGAACTC AGGACAGC TCGCCCTGTCGCGCC TERM 1673 1919946 - 1919960 + G 79 -11.4 -3.90744 | AGCTCGCCCTGTCGC GCCGAG GCG CTCGGC TTGTTTCGGAGGCGG Bphy_4852 1919564 - 1921135 + | transcriptional regulator Bphy_4853 1921586 - 1923067 + | amino acid permease-associated region TERM 1674 1923113 - 1923079 - T 95 -19.4 -2.53263 | overlap 1923109 CTGACTTTGAAGGTA CGGACTCGGTTACGCA TCC CGCGTAACCGAGTCCC GGAACCAGGTCACTG Bphy_4855 1926411 - 1924327 - | resolvase domain-containing protein Bphy_4856 1927134 - 1926682 - | hypothetical protein Bphy_4857 1927532 - 1927323 - | hypothetical protein TERM 1675 1929155 - 1929118 - g 78 -14.3 -3.28712 | gap 1, overlap 1929119 CCGGTTGGTTCACAA CGCGCATCGACTCACGCT ATC AG-GCGAATCGATGCGCA AGCGCCGAAATGGTT TERM 1676 1929154 - 1929119 - g 77 -15.6 -2.57132 | gap 1, overlap 1929118 CGGTTGGTTCACAAC GCGCATCGACTCACGCT ATC AG-GCGAATCGATGCGC AAGCGCCGAAATGGT Bphy_4858 1928438 - 1929196 + | IstB ATP binding domain-containing protein Bphy_4859 1929731 - 1930531 + | ABC transporter related Bphy_4860 1930528 - 1931184 + | polar amino acid ABC transporter, inner membrane subunit TERM 1677 1931694 - 1931725 + G 79 -2.2 -5.05113 | gap 1 GCGCTCCCCGAGCTT GTCACGCGGGCAAAT CAG ATTGGCACGGG-GAC TTTTCTTTATATGCA Bphy_4861 1931181 - 1931840 + | polar amino acid ABC transporter, inner membrane subunit TERM 1678 1932478 - 1932467 - g 87 -5.8 -4.99134 | AGCTTAAAGGAAAAA CGGT GGGG ACCG TTCAAGGGTATAACT Bphy_4862 1932031 - 1932867 + | extracellular solute-binding protein TERM 1679 1932964 - 1932940 - f 74 -11.3 -3.54424 | GTCGATTCGGGGAAA CGAGGCGGCGG TTT CGGCTGCCTCG ATCTCGACCGACGGT TERM 1680 1933790 - 1933761 - g 95 -15.1 -4.00042 | opp_overlap 1933761 GCGCCTATCAAATAA GTCGAAGCGGCTA TTAC CAGCCGCTTCAAC AACATAATCCGCGTG Bphy_4863 1933070 - 1933849 + | Hydantoin racemase-like protein TERM 1681 1935569 - 1935591 + G 76 -6.2 -4.56597 | overlap 1935570 1935571 GCGCCGATGGTTAGC TTCGCCAGTA GCC TACCGGCGGG TTTTTCAACGGAAGC Bphy_4864 1934933 - 1936762 + | hypothetical protein TERM 1682 1937363 - 1937346 - g 72 -3.3 -4.65895 | overlap 1937347 CGCGTGATGGAAAAA GCGCGAT GGTA ACCGCGG AACTCAGCGAGCTGG Bphy_4865 1936838 - 1939198 + | RND efflux transporter Bphy_4866 1939216 - 1940205 + | hypothetical protein TERM 1683 1940239 - 1940261 + F 81 -9 -4.36914 | opp_overlap 1940240, overlap 1940240 ATGCAACTGTCCAAA AGGGTGCGCC ATA GACGCACCCA TTTTATCGCACCCCC TERM 1684 1940240 - 1940260 + F 79 -12.5 -3.21934 | opp_overlap 1940240, overlap 1940239 TGCAACTGTCCAAAA GGGTGCGCC ATA GACGCACCC ATTTTATCGCACCCC TERM 1685 1940260 - 1940240 - f 100 -14.7 -4.11484 | opp_overlap 1940240 1940239 TGCAACTGTCCAAAA GGGTGCGCC ATA GACGCACCC ATTTTATCGCACCCC TERM 1686 1940378 - 1940363 - f 72 -6.2 -4.30978 | opp_overlap 1940353 1940365 TCGAATCGACTAAAA TACTGA ATGG TCAGTA TGTAAGTCCGATCAT TERM 1687 1941440 - 1941426 - g 72 -8.5 -4.07568 | TGGTTTCTTGGAAAA GGCGG TCTTG CCGCC AGTAACCAGTTCGAA Bphy_4867 1940412 - 1942094 + | glucose-methanol-choline oxidoreductase Bphy_4868 1942198 - 1943331 + | alcohol dehydrogenase TERM 1688 1944831 - 1944811 - g 71 -3.9 -4.56775 | opp_overlap 1944815, overlap 1944814 ATGTGCTCGCAAAAA GAGCCGCAA AGT TCGCGATTC TGAACAAGATTGATC TERM 1689 1944896 - 1944912 + G 70 -5.8 -4.2679 | GCGGGCGATGCCGTT GCTCTC CAATC GGGAGC TTTTGGTCAGAGTTG Bphy_4869 1943682 - 1945349 + | carboxylesterase type B TERM 1690 1945461 - 1945429 - f 78 -9.2 -4.07885 | overlap 1945432 CAGCTTGCGGGAAAA TATTTGCTGGCGTA GATTT TACGCCAGCACCTA ACCGAACTGAGTTGA Bphy_4870 1945663 - 1947033 + | hypothetical protein TERM 1691 1948374 - 1948392 + G 74 -13.2 -3.29273 | opp_overlap 1948373 1948372, overlap 1948372 GCTTCAGATGAAAGG CCCCATCA CCA TGATGGGG TATTATGGTCGTCCC Bphy_4871 1947295 - 1948815 + | AMP-dependent synthetase and ligase Bphy_4872 1950401 - 1949241 - | porin Bphy_4873 1952063 - 1950558 - | major facilitator transporter TERM 1692 1951594 - 1951575 - G 81 -5 -4.8667 | GACAGCCCAGAAAAA GACTCG CCGAACCC CGAGTC GATCGATCAATGAAC TERM 1693 1952134 - 1952115 - R 78 -2.9 -5.15167 | opp_overlap 1952121, overlap 1952121 TACGATGAACAAAAA TAAACTG ACTGGG CAGTCTA ATGTTTGCGGATGAT Bphy_4874 1952866 - 1952666 - | hypothetical protein Bphy_4875 1953178 - 1952903 - | hypothetical protein TERM 1694 1953523 - 1953539 + H 74 -13.7 -2.50443 | overlap 1953522 1953525 TCCAGCAACGTGGCA GAGCGCG CTT CGCGCTC GTTAGTGAAGTGTCG TERM 1695 1953552 - 1953584 + H 76 -12.9 -3.06037 | opp_overlap 1953549, overlap 1953545 CTCGTTAGTGAAGTG TCGCCAATATTACTT CCA GGGTAATATTGGCGG TATGTAATTTAGAAT TERM 1696 1954513 - 1954545 + H 76 -7.1 -4.4521 | opp_overlap 1954534 GGGGGTCCTCCACTT GACTTGCTGGTTTTT TAT AGAGACTATCAAGTC TTCTTTTTGACTGGT TERM 1697 1955891 - 1955869 - g 93 -5.5 -5.24129 | opp_overlap 1955869, overlap 1955872 1955873 1955883 TCCGGTCATAAAAAA GTACCGGCA GGTAA TGCCGAAAC TTTCGGAGCCCGAGC TERM 1698 1955958 - 1955947 - g 76 -5.8 -4.56597 | opp_overlap 1955956 CGGCTTCTGGAAAAA TGCG GTTA CGCA GGCCGACATGCTTGT Bphy_4876 1954646 - 1956343 + | carboxylesterase type B TERM 1699 1956450 - 1956418 - f 86 -12.1 -3.95424 | overlap 1956447 1956448 AGTATTAATATCAAA CGCGTTCCTGGAATT TTT AATTTCAGGAATGCG TCGAAACGCGAAACG Bphy_4877 1956604 - 1956960 + | TfoX, N-terminal TERM 1700 1957365 - 1957338 - T 81 -12.8 -3.63515 | opp_overlap 1957337 1957336 GTTGAGGTTCAAGAA CGGTAGGCGA TTACTCGC TCGCCTACCG AATTTGCACCACAAT Bphy_4878 1958582 - 1957434 - | porin TERM 1701 1958607 - 1958625 + H 77 -2.4 -5.09173 | opp_overlap 1958610, overlap 1958610 TCCCGTTTTGGTGAA TTACTTCC GTG GAAGGTAA TTTTTTAACATCTTC TERM 1702 1959247 - 1959232 - g 72 -6.8 -4.21607 | gap 1, opp_overlap 1959246, overlap 1959233 CTGATTCAACAGAAA CTGGGCG CGT CGCCC-G TCGTGATCAGGCGGC Bphy_4879 1958839 - 1959282 + | hemerythrin-like metal-binding protein Bphy_4880 1959313 - 1960311 + | ferredoxin Bphy_4881 1960354 - 1961658 + | Rieske (2Fe-2S) domain-containing protein Bphy_4882 1961685 - 1962953 + | phthalate 4,5-dioxygenase Bphy_4883 1962965 - 1963792 + | short-chain dehydrogenase/reductase SDR TERM 1703 1963925 - 1963900 - g 76 -14 -3.14931 | GTGAGCGCCGACGAA GCGCGTGCGG GCATGG CCGCACGCAC GGCCACTCGCGCGCC Bphy_4884 1963876 - 1964745 + | alpha/beta hydrolase domain-containing protein Bphy_4885 1964823 - 1965929 + | transposase IS4 family protein TERM 1704 1966856 - 1966835 - g 78 -12.9 -3.53343 | opp_overlap 1966845 1966847, overlap 1966823 1966836 AAGTCGCGTGCCAAA GGCGCGGCG CGAA CGCCGCGCA AGCGGTGATGATTTT TERM 1705 1966855 - 1966836 - g 81 -16.4 -2.71791 | opp_overlap 1966845 1966847, overlap 1966823 1966835 AGTCGCGTGCCAAAG GCGCGGCG CGAA CGCCGCGC AAGCGGTGATGATTT Bphy_4886 1966253 - 1966864 + | MarR family transcriptional regulator Bphy_4887 1967751 - 1966963 - | enoyl-CoA hydratase/isomerase TERM 1706 1967603 - 1967585 - G 86 -10.2 -4.30576 | overlap 1967587 CCGCCATGACTAAAA TTCGCGCC TTC GGCGCGTA CCAGTAGAGCCCGGA Bphy_4888 1968139 - 1967825 - | hypothetical protein Bphy_4889 1969184 - 1968255 - | LysR family transcriptional regulator TERM 1707 1969438 - 1969476 + H 73 -11.7 -3.14683 | gap 1 ACGCTGATGCATCAG GCGATACCGGAGAG-GGT AACG GCCGCACTCCGGAATCGC TTGGTCGGAGCATCT Bphy_4891 1970365 - 1970658 + | transposase IS3/IS911 family protein Bphy_4892 1970655 - 1971545 + | integrase catalytic region TERM 1708 1971807 - 1971823 + F 74 -6.5 -4.41348 | opp_overlap 1971807 1971809, overlap 1971803 AATGTTGGTATCGAA CACCAGA GAT TCAGGTG TTTGTTTCAAAACAA Bphy_4893 1971982 - 1972974 + | alcohol dehydrogenase Bphy_4894 1973006 - 1973410 + | endoribonuclease L-PSP Bphy_4895 1973975 - 1975039 + | AraC family transcriptional regulator TERM 1709 1975309 - 1975331 + T 79 -13.4 -3.06183 | opp_overlap 1975295 ACGACTATGCTGAAT GGAGCTTGCG CTA CGCGGGCTCC TTCCATCGCAATCGA TERM 1710 1976072 - 1976094 + T 73 -12 -3.02144 | CGCCATGGCCGGGCA CGTAGTCGAG TTG CTCGCCTACG TCTTCGCCGAGATCA Bphy_4897 1977590 - 1976580 - | integrase family protein Bphy_4898 1978537 - 1977587 - | integrase family protein Bphy_4899 1979793 - 1978534 - | integrase family protein TERM 1711 1978844 - 1978816 - G 75 -10.3 -3.86015 | opp_overlap 1978836 GATTTGCCGGACAAA GACGGCACGAT TACTCGT ATCGGGCCGTC CGTGCTGTAGATAGC Bphy_4901 1982814 - 1980730 - | resolvase domain-containing protein Bphy_4902 1983537 - 1983085 - | hypothetical protein Bphy_4903 1983935 - 1983726 - | hypothetical protein Bphy_4904 1984835 - 1985623 + | IstB ATP binding domain-containing protein TERM 1712 1986552 - 1986564 + G 74 -10.5 -3.68836 | CTTCATCGTTTCAGT CGGGC TCG GCCCG TTCTTGGATCGCTAT Bphy_4906 1986313 - 1987581 + | major facilitator transporter Bphy_4907 1987630 - 1988001 + | hypothetical protein TERM 1713 1988132 - 1988174 + T 93 -17.8 -3.35679 | opp_overlap 1988132, overlap 1988141 CTGGGCGGCGACAAA TGGAATGAACGCCCCATCCT CAT AGTTGGGGGCGTTCATTCCA TTGTCGCTGAAGGGC TERM 1714 1988174 - 1988132 - T 100 -17.8 -3.85698 | opp_overlap 1988132 1988141 CTGGGCGGCGACAAA TGGAATGAACGCCCCATCCT CAT AGTTGGGGGCGTTCATTCCA TTGTCGCTGAAGGGC TERM 1715 1988541 - 1988560 + T 78 -7.9 -4.43844 | opp_overlap 1988544 AAGCAGGTCTTCGAA GTAGGCA CCGAAT TGCCTAC TTTTGTGCCTGATGA Bphy_4908 1989179 - 1988520 - | hypothetical protein Bphy_4909 1990560 - 1989181 - | oxidoreductase FAD/NAD(P)-binding subunit Bphy_4910 1991926 - 1990931 - | alcohol dehydrogenase Bphy_4911 1993810 - 1992158 - | AMP-dependent synthetase and ligase TERM 1716 1992376 - 1992366 - G 70 -4.6 -4.42788 | opp_overlap 1992366 CGCAATTCGACAAAA GCGC ACG GCAC TTCTCCCCACTTTTC Bphy_4912 1994550 - 1993807 - | nitroreductase Bphy_4913 1996189 - 1995143 - | AraC family transcriptional regulator TERM 1717 1996910 - 1996897 - R 83 -4.5 -5.07567 | opp_overlap 1996906, overlap 1996898 CCACACCTCAAAAAA CGTCG AAAG CGACA GGCGTTGTTCTCAAA TERM 1718 1996951 - 1996938 - R 70 -2.3 -4.7329 | overlap 1996930 AAAAGTAGGTAAAAA CACCG TACT CAGCG CAATACGCAGAGTGG Bphy_4916 1998541 - 1997567 - | transposase IS4 family protein TERM 1719 1997815 - 1997827 + g 75 -10.5 -3.84825 | overlap 1997823 GATTCGTAAAGTCGC GCGCC TTC GGCGC TTTGCTGTGGATCAG TERM 1720 1998360 - 1998339 - G 71 -9.5 -3.72893 | gap 1 CAGTGCTGGATGAAA TGGATGCGCA GCA TGCGC-TCCA GATCAATCGGCGGGC TERM 1721 1998888 - 1998860 - H 80 -14.7 -2.83164 | opp_overlap 1998858 TGAGCGAGGAGCATA GGTGTCCACCT ATTTGTG AGGTGGACACC TATGGCTGACAAAGA TERM 1722 1998949 - 1998930 - g 72 -11.4 -3.54741 | GAGTAGTTCGGCAAA GCAGCGAC GGCC GTCGCCGC TACGATGAAAATGGC TERM 1723 1999107 - 1999091 - g 73 -9.4 -3.87994 | opp_overlap 1999099 ATGGAGCGCGAGAAA GGCGTC TCGCC GACGCC GCAGGATAACGGCGA Bphy_4917 1998890 - 1999408 + | transposase IS3/IS911 family protein Bphy_4918 1999384 - 1999737 + | IS66 Orf2 family protein TERM 1724 2000008 - 1999994 - g 70 -11.4 -3.33815 | overlap 1999976 AGCCTGTTCAACGAA GCCGAG GTG CTCGGC GCGAGCAGCTCACCT Bphy_4919 1999769 - 2001349 + | transposase IS66 TERM 1725 2001541 - 2001551 + T 72 -4.6 -4.63542 | overlap 2001525 CCGCTCCATTACAGA GCGG CAT TCGC TTTTTCCGCGTTCTC Bphy_4921 2004569 - 2002974 - | AMP-dependent synthetase and ligase TERM 1726 2004076 - 2004066 - G 100 -2.4 -5.64274 | opp_overlap 2004066 2004072 CGATGTATAAAAAAA CCAC AGG GGGG TGTCATAGTCGACGA Bphy_4922 2005726 - 2004566 - | Propanoyl-CoA C-acyltransferase TERM 1727 2005796 - 2005780 - H 80 -4.4 -4.87626 | CGGCAACATCAAAAA GTTGCC CGCTT GACAAC AAGACTAGACTCACT Bphy_4923 2005868 - 2006767 + | LysR family transcriptional regulator TERM 1728 2007317 - 2007300 - f 78 -9.9 -4.07568 | overlap 2007311 GCGTTGTTCGTAAAA GTAGGTG AAAA CACCTAC ATCAGGCGCACCCGG Bphy_4924 2007739 - 2008542 + | short-chain dehydrogenase/reductase SDR TERM 1729 2008695 - 2008661 - g 76 -5.7 -4.58685 | gap 1, opp_overlap 2008686, overlap 2008649 2008650 2008662 AAACTGGGCGAAAAA TCGCCCGACGTCAACG AAAC CGCTTACGTCGCG-GA GGGCGCGACGATCAT Bphy_4925 2008634 - 2009158 + | hexapaptide repeat-containing transferase Bphy_4926 2009286 - 2010599 + | major facilitator transporter Bphy_4927 2010979 - 2012166 + | glycerate kinase TERM 1730 2012327 - 2012348 + T 100 -5 -6.11243 | overlap 2012328 GTGTAGATATGGATT CGGCCCGC ACCTTG GTGGGCCA TTTTTTTTGTTGGGT TERM 1731 2012328 - 2012347 + T 78 -8.5 -4.24306 | overlap 2012327 TGTAGATATGGATTC GGCCCGC ACCTTG GTGGGCC ATTTTTTTTGTTGGG Bphy_4928 2013322 - 2012399 - | LysR family transcriptional regulator TERM 1732 2014298 - 2014344 + G 71 -7.3 -4.12188 | overlap 2014297 GAGCCAGCGTTGCAT GGCGGTCTCGCTGTTGT-TGCCC GTA GGGCACGAAACGGCT-GATCGCC TTTTGGAACTCGTCG TERM 1733 2014845 - 2014861 + G 74 -2.1 -4.83169 | overlap 2014846 GACGGCCATCTGTAC GGTCCGG ATG CCGCACG TTTTTATACCAAGCT Bphy_4929 2013450 - 2014955 + | methylmalonate-semialdehyde dehydrogenase Bphy_4930 2015058 - 2016041 + | alcohol dehydrogenase Bphy_4931 2016076 - 2016957 + | 3-hydroxyisobutyrate dehydrogenase Bphy_4932 2016998 - 2018227 + | extracellular ligand-binding receptor Bphy_4935 2019634 - 2018675 - | AraC family transcriptional regulator TERM 1734 2020167 - 2020145 - g 79 -15 -2.92371 | opp_overlap 2020151, overlap 2020140 2020151 ATTGATTCAAGCATA CGAGAATGTG CGT CACATTCTCG CCTCTCAAGGTGCGA Bphy_4936 2019930 - 2020382 + | endoribonuclease L-PSP Bphy_4937 2020405 - 2020929 + | hypothetical protein Bphy_4938 2022044 - 2021028 - | AraC family transcriptional regulator Bphy_4939 2022186 - 2023853 + | AMP-dependent synthetase and ligase Bphy_4940 2023867 - 2024634 + | short-chain dehydrogenase/reductase SDR Bphy_4941 2024654 - 2025844 + | acetyl-CoA acetyltransferase TERM 1735 2026108 - 2026141 + F 71 -10.9 -3.31144 | CTGCCACGCGAGATG GGCTGCGGCAGCGGC ATGA GTTGCTGGCGCGGTC TTATGGGACTGGCAG TERM 1736 2026172 - 2026207 + F 70 -11.8 -2.77235 | overlap 2026169 GCTGCCGGCGTCTGG GGCCGGCTGCGCGA AGTGCTGA TCGCGAAGCCGACC TGATTGACTGGTTCC Bphy_4943 2027215 - 2028930 + | methyl-accepting chemotaxis sensory transducer Bphy_4944 2029560 - 2030930 + | major facilitator transporter Bphy_4945 2031020 - 2032198 + | L-carnitine dehydratase/bile acid-inducible protein F Bphy_4946 2032223 - 2033032 + | HpcH/HpaI aldolase Bphy_4948 2035035 - 2034283 - | short-chain dehydrogenase/reductase SDR TERM 1737 2034949 - 2034971 + g 91 -16.4 -3.53012 | GACGACCTGTGCACC TTGCTCGACG TAG CGTCGAGCAA TTTGAGCGCCGAAAC Bphy_4949 2036495 - 2035062 - | aldehyde dehydrogenase Bphy_4950 2037712 - 2036705 - | LysR family transcriptional regulator TERM 1738 2036778 - 2036790 + g 81 -4.7 -4.91712 | overlap 2036779 AATGCAGACTCCACG ACCGG CAG CCGGA TTTTTATCCCTTGCC Bphy_4952 2038209 - 2038535 + | transposase IS3/IS911 family protein Bphy_4953 2038592 - 2039443 + | integrase catalytic region TERM 1739 2041821 - 2041808 - f 85 -3.1 -5.38249 | overlap 2041818 ATCAATCACAAAAAA TGACC ACAA AGTCA GTATGAATGAACTGA Bphy_4955 2042676 - 2043521 + | transposase IS4 family protein Bphy_4956 2044880 - 2043855 - | transposase IS116/IS110/IS902 family protein Bphy_4957 2044937 - 2045458 + | hypothetical protein Bphy_4959 2046847 - 2045741 - | transposase IS4 family protein TERM 1740 2046893 - 2046921 + H 87 -15.3 -3.34715 | overlap 2046889 ATTTCAACGTTTACC CCTCCCGCGCG GATGACG TGCGCGGGAGG TATTTCAACAGCCTG TERM 1741 2048090 - 2048079 - g 70 -5.8 -4.25104 | overlap 2048080 TGTTCGTGACCAAAA TGCG CTGG CGCA TCGAGCGCGACTATC Bphy_4960 2047016 - 2048335 + | transposase IS4 family protein Bphy_4961 2049948 - 2049058 - | integrase catalytic region Bphy_4962 2050238 - 2049945 - | transposase IS3/IS911 family protein Bphy_4963 2050351 - 2050980 + | hypothetical protein Bphy_4964 2051105 - 2051491 + | hypothetical protein Bphy_4965 2051647 - 2052408 + | ABC transporter related TERM 1742 2053024 - 2053047 + T 83 -15.3 -2.80994 | opp_overlap 2053002 2053021 2053043 GTAGCCGAACGACGA CGCGCTGCC GATCAA GGCAGCGCG TATCGTGCGCTTGCG Bphy_4967 2054591 - 2053104 - | integrase family protein TERM 1743 2054097 - 2054084 - G 70 -5.9 -4.25104 | GGTCGCGCAGGAAAA GCCGG ATCG CCGAC GCATCATCGAAGGTG Bphy_4968 2055479 - 2054631 - | hypothetical protein TERM 1744 2055642 - 2055652 + H 74 -8.2 -4.16842 | opp_overlap 2055630 CAAGTTACCGCGGCG GCGG GAA CCGC TTTATTCGCAATCCG Bphy_4969 2056085 - 2056906 + | transposon Tn7 transposition protein TnsA Bphy_4970 2056926 - 2057474 + | hypothetical protein TERM 1745 2059582 - 2059568 - g 81 -3.4 -5.06103 | overlap 2059557 2059570 ACAACGCCGAAAAAA GGCGGG CGA CCCAAC CCCAGCGGATCATGG Bphy_4971 2057467 - 2059887 + | hypothetical protein TERM 1746 2061602 - 2061589 - g 100 -5.9 -5.63103 | overlap 2061590 2061591 TGGCAACGAAAAAAA CGCCG CGAC CGGCA AAGGCCCCGGGAAGA Bphy_4972 2059973 - 2061622 + | hypothetical protein TERM 1747 2061934 - 2061920 - g 73 -5.6 -4.35524 | overlap 2061922 TGGTCAAAGGCAAAA GTCGAC TTC GTCGCC GGCGTGTGCATCCAG TERM 1748 2062743 - 2062717 - g 70 -5.1 -4.37886 | opp_overlap 2062736 CGAGCGCGGAGAAAA CCGGCGG CTTGCCCCGACCT CCGCCGG ACCGGATTTTGCGCG TERM 1749 2062984 - 2062966 - g 73 -5.8 -4.36914 | GGCGCTGGCAGAAAA CGGCCGGC TCT GGCGGTCG GTCCGAAGCCTATGG Bphy_4973 2061656 - 2063044 + | hypothetical protein Bphy_4974 2063056 - 2063949 + | LysR family transcriptional regulator Bphy_4975 2064040 - 2064270 + | hypothetical protein Bphy_4976 2066970 - 2064532 - | hypothetical protein TERM 1750 2065620 - 2065639 + g 75 -3.4 -4.8048 | opp_overlap 2065597 GTTGAGAAATGAAGC GCAGCAAG TCGT CTGGCAGC TTTTTGATATGCCCG TERM 1751 2066667 - 2066647 - G 75 -12.5 -3.44146 | opp_overlap 2066649 GCGCTTTACAAGGAA GACGGCGTC CTG GCCGCCGTC TTGGGCTTCGCGGTA TERM 1752 2067009 - 2067043 + H 100 -23.2 -4.20531 | opp_overlap 2067012 2067018, overlap 2067012 2067018 TCGCGAACCGTTTGA GAACCAAAATGCACCA TAT TGGTGCATTTTGGTTC TTTTGAATAGGTATG TERM 1753 2067012 - 2067040 + H 100 -19.1 -4.22214 | opp_overlap 2067012 2067018, overlap 2067009 2067018 CGAACCGTTTGAGAA CCAAAATGCACCA TAT TGGTGCATTTTGG TTCTTTTGAATAGGT TERM 1754 2067040 - 2067012 - H 100 -19.1 -3.30159 | opp_overlap 2067012 2067009 2067018, overlap 2067018 CGAACCGTTTGAGAA CCAAAATGCACCA TAT TGGTGCATTTTGG TTCTTTTGAATAGGT TERM 1755 2067034 - 2067018 - H 93 -10.9 -4.48987 | opp_overlap 2067012 2067009 2067018, overlap 2067012 GTTTGAGAACCAAAA TGCACCA TAT TGGTGCA TTTTGGTTCTTTTGA TERM 1756 2067018 - 2067034 + H 93 -10.9 -4.67123 | opp_overlap 2067018 2067012, overlap 2067012 2067009 GTTTGAGAACCAAAA TGCACCA TAT TGGTGCA TTTTGGTTCTTTTGA Bphy_4977 2067203 - 2069917 + | ATPase central domain-containing protein Bphy_4978 2069985 - 2070569 + | hypothetical protein TERM 1757 2070612 - 2070631 + G 70 -5.6 -4.2349 | opp_overlap 2070611 2070606, overlap 2070613 TCGCAAGGATGAATC TCTCGACC GCCT GGCCGAGG TTTTCAATGTCGCAC TERM 1758 2071037 - 2071005 - g 100 -14.7 -4.36914 | opp_overlap 2071035 GCGCTGCGTAGAAAA GCCTGGCGTCGCCTC CTT GCCGCGTCGCCAGGC CATTGACCTGCTTCA Bphy_4979 2070589 - 2071962 + | hypothetical protein Bphy_4980 2073790 - 2072078 - | hypothetical protein TERM 1759 2073091 - 2073103 + g 71 -7.7 -4.15066 | opp_overlap 2073090, overlap 2073090 GAAAGGCGACGAACT GACGA GGG TCGTC TTTGCTTTCTCGCTC Bphy_4981 2075028 - 2073787 - | hypothetical protein TERM 1760 2075358 - 2075346 - H 71 -10.5 -3.53012 | CTTTTTGCGTCTAAA GCCGG CAG CCGGC TGCACAGGTCTCTGA TERM 1761 2075945 - 2075969 + G 72 -3.4 -4.614 | TCACTCTCAACACGG CTGGCGTGCG GGATG CGATTGCCAG TTTTGTGTCGTTGAG TERM 1762 2077791 - 2077804 + G 82 -3.7 -5.00616 | overlap 2077785 CGAAAGGGCCGGGGC GTGCG CATC CGCTC TTTTTTCCGAGGCCG Bphy_4982 2075686 - 2079786 + | hypothetical protein Bphy_4983 2080022 - 2080528 + | hypothetical protein TERM 1763 2081924 - 2081906 - g 82 -3.8 -5.0133 | overlap 2081907 GACGTCCGTAAAAAA TTCCCTGA CGG TCAAGGAG GCAGGGCAATAGGTC Bphy_4984 2081595 - 2081936 + | transport-associated Bphy_4985 2081949 - 2082359 + | BadM/Rrf2 family transcriptional regulator Bphy_4986 2083284 - 2082565 - | hypothetical protein Bphy_4987 2084183 - 2083368 - | hypothetical protein Bphy_4988 2084756 - 2085955 + | LysR family transcriptional regulator Bphy_4989 2086824 - 2086126 - | GntR family transcriptional regulator TERM 1764 2086666 - 2086683 + g 78 -4.1 -4.76041 | opp_overlap 2086662, overlap 2086662 2086669 CGTTCTTGAAATGTC GAACTGT TCGC ACAGTGC TTTTTCGTCGATATG TERM 1765 2087518 - 2087471 - g 85 -16.8 -3.1505 | gap 1, opp_overlap 2087467 ATGACGCGGCATGAA CGCGGCC-GCGGGGCGACGCTGC TTG ACGGCGGCGCCCCGCTGGGGGCG GCATTCGGTGCAGTG TERM 1766 2088004 - 2088034 + G 88 -15.4 -3.36505 | overlap 2088028 GCGCACGCTGTTCGG GATCGCCGCCGTGG CGG CCACAGCGTCGATC TTCTCGGTCGCCTAT Bphy_4990 2087051 - 2088346 + | major facilitator transporter Bphy_4991 2088386 - 2089114 + | Asp/Glu/hydantoin racemase TERM 1767 2089469 - 2089443 - g 74 -11.5 -3.57561 | overlap 2089428 GGGCAATCCCTCAAA GCCGCGGTGGC CGACT ACCACCGCCGC GCCGACGGCCGCGCG Bphy_4992 2089125 - 2090540 + | dihydropyrimidinase Bphy_4993 2090555 - 2091307 + | Asp/Glu/hydantoin racemase Bphy_4994 2091334 - 2091771 + | hypothetical protein Bphy_4995 2092113 - 2092316 + | cold-shock DNA-binding domain-containing protein TERM 1768 2092654 - 2092667 + G 78 -4.5 -4.74132 | overlap 2092655 CCCTCGGCGCATCGT TTGCC CGAC GGCAG TTTTTCATCCAATCT TERM 1769 2092718 - 2092728 + G 70 -2.4 -4.68384 | overlap 2092710 ACGCGCACGGTGATC GCCG GTA CCGC TTTTATTCGCTCGAT Bphy_4996 2092594 - 2092818 + | hypothetical protein Bphy_4997 2093811 - 2092873 - | aldehyde reductase TERM 1770 2093056 - 2093084 + g 79 -10.2 -4.07568 | TGTGCCGCGCTGCAC CGCCCACGCAAG CAGCA CTTGCGCCGGCG TTTTACCCACCCGCG Bphy_4998 2095890 - 2094343 - | RND efflux system outer membrane lipoprotein Bphy_4999 2096963 - 2095887 - | secretion protein HlyD family protein Bphy_5000 2098583 - 2096976 - | major facilitator transporter TERM 1771 2098207 - 2098191 - G 72 -3.6 -4.67943 | GCGCAATACATAAAA CGTCGA GAGAT TCGGCG CAAGCGGACAAAGCA TERM 1772 2099245 - 2099230 - g 70 -4.6 -4.41895 | AACGTGCAATGAAAA GCGTTG ACGG CGACGC GAAAGTCGATGTGAA Bphy_5001 2099091 - 2099363 + | hypothetical protein TERM 1773 2099405 - 2099368 - T 74 -11.1 -3.5002 | opp_overlap 2099372 2099373, overlap 2099364 2099369 TTGAAGCATAAGCAA TCGACGTGGCCGGCCGC GTTT GCGCGCGGCCACTTCGT TCAAGCGTCGTCCGA TERM 1774 2099404 - 2099369 - T 78 -14.6 -2.6953 | opp_overlap 2099372 2099373, overlap 2099368 2099364 TGAAGCATAAGCAAT CGACGTGGCCGGCCGC GTTT GCGCGCGGCCACTTCG TTCAAGCGTCGTCCG TERM 1775 2099373 - 2099400 + T 79 -12.6 -3.34344 | opp_overlap 2099369 2099368 2099364, overlap 2099372 GCATAAGCAATCGAC GTGGCCGGCCGC GTTT GCGCGCGGCCAC TTCGTTCAAGCGTCG TERM 1776 2099626 - 2099669 + T 84 -16.1 -2.6072 | gap 1, opp_overlap 2099627, overlap 2099623 2099621 2099659 TGTCAGATATCAGAT AGCGCCGTCCGCT-TTCACG CTCGT TGTGAATGGCGGACGGCGCA TGCGTTCGTTCACTC TERM 1777 2099668 - 2099627 - T 88 -16.7 -2.99545 | gap 1, opp_overlap 2099626 2099623 2099621 2099659 GTCAGATATCAGATA GCGCCGTCCGC-TTTCAC GCTCGTT GTGAATGGCGGACGGCGC ATGCGTTCGTTCACT Bphy_5002 2100361 - 2099687 - | antibiotic biosynthesis monooxygenase Bphy_5003 2100656 - 2101618 + | LysR family transcriptional regulator Bphy_5004 2102189 - 2101650 - | uracil-DNA glycosylase superfamily protein TERM 1778 2101858 - 2101879 + g 72 -3.6 -4.66163 | opp_overlap 2101856 2101851 2101858 2101860, overlap 2101864 2101865 CCGAGGAAGGCAATA TAGCGCGG CGCATA CTGCGCAA TTTTTCGCTCGAACT Bphy_5005 2103304 - 2102309 - | AraC family transcriptional regulator TERM 1779 2103242 - 2103221 - G 72 -8.7 -4.15222 | overlap 2103241 ATGCGCGGGAATAAA CGTGTTCGC TTCC GCGAAGACG TCGAGAGGGCCTGCG Bphy_5006 2103709 - 2103371 - | hypothetical protein TERM 1780 2103763 - 2103775 + H 76 -4.7 -4.8622 | CTGGGTGGCTGACAT CGCGC AGC GCCCG TTTTTCATTCGAGAC TERM 1781 2103887 - 2103845 - g 72 -11.2 -3.53012 | opp_overlap 2103856 2103857 2103859, overlap 2103826 2103807 TTCTGCCCCTGCAAA CGGGCGCGAACCGATGTCGG GCG CCGACATCATTTTGCGCGTG CTCAGCGAACAGGGC TERM 1782 2103856 - 2103876 + G 76 -9.7 -4.12188 | opp_overlap 2103807 2103845, overlap 2103857 2103859 CAAACGGGCGCGAAC CGATGTCGG GCG CCGACATCA TTTTGCGCGTGCTCA TERM 1783 2103857 - 2103875 + G 72 -13.2 -3.06991 | opp_overlap 2103807 2103845, overlap 2103856 2103859 AAACGGGCGCGAACC GATGTCGG GCG CCGACATC ATTTTGCGCGTGCTC TERM 1784 2103942 - 2103957 + G 78 -4 -4.74103 | gap 1 GGCGGCGCGATTCTT CCGACAT ACG ATG-CGG TTTTTCGCTTCAACG TERM 1785 2104910 - 2104874 - g 91 -6.5 -5.08824 | overlap 2104876 CGGCGATGCAAAAAA CGCGCTCGCCTCG CTGCTTGAGTT CGATGCGAGCGTG CAAGCGCCATTCGAC Bphy_5007 2103795 - 2105660 + | acetolactate synthase, large subunit, biosynthetic type Bphy_5008 2105866 - 2106210 + | 1-deoxy-D-xylulose-5-phosphate synthase Bphy_5009 2106197 - 2106544 + | ArsR family transcriptional regulator Bphy_5010 2107080 - 2106664 - | hypothetical protein TERM 1786 2106917 - 2106968 + g 80 -12.4 -3.76568 | opp_overlap 2106929 TCGTTCGCTGCATTA TTCACCTCGAAAGTGACACGCC CCGCTTTT GCCGTGTCGCTATCGAGTTGAA TTGTGTTGTCCGTCA Bphy_5011 2107547 - 2107846 + | hypothetical protein TERM 1787 2107905 - 2107851 - T 88 -17.2 -2.91264 | gap 4, opp_overlap 2107861 CCGTGCATTGACAGA GTCGGGCGC-GCGTCGGCCCGGTCGCCC GTC GGG-G-C-GGGCCGACGCGGCGCGCGGC GCTAAGTCATTGCGC Bphy_5012 2109651 - 2107912 - | sulfate transporter TERM 1788 2108428 - 2108418 - G 72 -8.2 -4.08216 | GTATTGCGCCGAAAA CGGC GAC GCCG GCGAAGCAGACGACC TERM 1789 2109925 - 2109914 - g 75 -4.4 -4.61873 | opp_overlap 2109914, overlap 2109909 GGGCAGAAATGAAAA CGAA TCGC TTCG TTATCGCAATGGCTG TERM 1790 2110318 - 2110346 + G 72 -13.1 -3.14878 | opp_overlap 2110304, overlap 2110316 ACGGTGATGGCGGAT GTCGTCGCCGTCG ACC CGAAGGCGAAGAC TGTTACGTTGAAGGG Bphy_5013 2109907 - 2110494 + | hypothetical protein Bphy_5014 2110579 - 2111004 + | hypothetical protein TERM 1791 2111865 - 2111877 + G 71 -9.1 -3.74361 | CGAAGTCGACATGGC GCCCT TCA AGGGC TTGTTGCTCGGTCTG Bphy_5015 2111071 - 2112243 + | potassium efflux system protein TERM 1792 2112418 - 2112396 - T 100 -14.8 -4.3586 | CGATGCACACGAAAA CACGGCCGGA CGA CCCGGCCGCG CTTCGCCTGCCGACT Bphy_5016 2113556 - 2112438 - | alanine dehydrogenase TERM 1793 2112708 - 2112677 - G 74 -13 -3.19522 | gap 1, opp_overlap 2112699, overlap 2112680 CGACGCAATAGTGAA CGACCTCGCCGACCT TGT AGGTCGGCGCAG-CG TGAGTGGTGGGCTTC TERM 1794 2112706 - 2112680 - G 73 -14.4 -2.7898 | opp_overlap 2112699, overlap 2112677 CGCAATAGTGAACGA CCTCGCCGACCT TGT AGGTCGGCGCAG CGTGAGTGGTGGGCT TERM 1795 2113747 - 2113726 - R 85 -15.1 -3.07816 | opp_overlap 2113726 GGCGCACGCACGCAA GCGGCCCGC CAGC GCGAGCCGC TTGCATCGACGATGA TERM 1796 2113726 - 2113747 + r 76 -12.9 -3.05816 | opp_overlap 2113726 GGCGCACGCACGCAA GCGGCCCGC CAGC GCGAGCCGC TTGCATCGACGATGA Bphy_5017 2114582 - 2113941 - | hypothetical protein TERM 1797 2114523 - 2114509 - G 77 -11.4 -3.73072 | opp_overlap 2114520 AACGCCTTGACGAAA CGCCGT GCG ACGGCG CCGCGCTCGATGCGC Bphy_5018 2115127 - 2114579 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1798 2115501 - 2115517 + G 72 -10.9 -3.54741 | overlap 2115492 TATGGTTGCGCATCA CGCATTG GCT CAATGCG TTTGCCGCGCTGATC TERM 1799 2115543 - 2115572 + G 72 -8.5 -4.08692 | gap 1 TGATCATGATGTTCT CGGGCTGGCGCATC TAC GACGCGTC-GCCTG TTTTCCGCGGCATTG Bphy_5019 2115416 - 2116054 + | putative transmembrane hydrogenase cytochrome b-type subunit Bphy_5020 2116075 - 2116851 + | oxidoreductase molybdopterin binding Bphy_5021 2116920 - 2117153 + | pentapeptide MXKDX repeat-containing protein TERM 1800 2117164 - 2117198 + T 100 -16.5 -4.31433 | gap 1, opp_overlap 2117154, overlap 2117156 2117168 AGTAAGCTGCCGTGG CAGTCAGCCGGGCGTG GGTT CGCGCCCGGCTG-TTG TTTGTTCTACGCCTG TERM 1801 2117168 - 2117195 + T 100 -20.6 -4.27512 | opp_overlap 2117154, overlap 2117156 2117164 AGCTGCCGTGGCAGT CAGCCGGGCGTG GGTT CGCGCCCGGCTG TTGTTTGTTCTACGC Bphy_5022 2118266 - 2117205 - | methyltransferase type 11 TERM 1802 2118081 - 2118048 - G 79 -11.7 -3.89524 | gap 1, opp_overlap 2118063 ATCGTAGCGGATAAA GCGCGAAGCGGCCTGC GCC GCGAGCCA-TTCGCGC ACGTATCGTTCGGCG Bphy_5023 2118449 - 2118868 + | MarR family transcriptional regulator TERM 1803 2118960 - 2118973 + G 71 -3.8 -4.56597 | CTACATAAGCTCCGA TGCG CATTTC CGCA TTTTTCGACCGGCGC TERM 1804 2119468 - 2119489 + G 80 -15.1 -3.05715 | CGCGTTGGCGGGCGC CGCCGCGGG GCTC TCCGCGGCG TTCAATGCGCCGCTT Bphy_5024 2118959 - 2120266 + | chloride channel core TERM 1805 2120399 - 2120357 - T 71 -11.9 -3.01712 | gap 2, opp_overlap 2120356 2120357 GTGCCGCTCTCAATA GGCGGCGCGCAGCGCTTCGTC GGC GACG--GCGAGGCGCGACGCC ATCGTCTTGATCAGA Bphy_5025 2122600 - 2120351 - | cyclic nucleotide-binding TERM 1806 2120495 - 2120467 - G 75 -13.8 -3.04144 | overlap 2120484 GTTCGAGCGCGAACA GCGCGGGCACCG ACAGA CGATGCACGCGC GTGCGTGCCTCGGCG TERM 1807 2121546 - 2121497 - G 73 -15.1 -2.52676 | gap 3, opp_overlap 2121545, overlap 2121468 2121514 GAGCGCGGCAAGGCA CGCGAGCGCGGCGAATACG-CCCG CGAGC CGGGTCGT-CGCGCCG-GCTCGCG CATTGAGCATCGAGC TERM 1808 2121908 - 2121896 - G 70 -2.6 -4.67608 | overlap 2121898 CAGCGCAATATAAAA CAGC GCGAA GCCG CACACGAGCACGAAC Bphy_5026 2123354 - 2122857 - | hypothetical protein Bphy_5027 2124873 - 2123338 - | diguanylate cyclase TERM 1809 2123762 - 2123742 - G 71 -12.5 -3.254 | overlap 2123740 GATCGAGGTAGAACA CGGCCGCAC GTG ACGCGGCCG ACGCCGGGGCCGCGC TERM 1810 2124573 - 2124607 + g 72 -9 -4.02719 | opp_overlap 2124569, overlap 2124588 GCGGCGCATAACGCG CCGCACACGCGTCGGG ATG CCGGGCGCTCGCGCGG TTTCGTCTTTCGTAC Bphy_5028 2126786 - 2124873 - | diguanylate cyclase/phosphodiesterase Bphy_5029 2127313 - 2126783 - | putative transmembrane protein TERM 1811 2127035 - 2127091 + g 75 -4.4 -4.60041 | overlap 2127036 2127065 TCTGGACGGCTTCTC GTTGCCCGCAAGCGCGGCC-ACGGTC CAGATCC GGCCGCCGGTCGC-TTTGCCGGCAAA TTTTTCGAGCTCGCT Bphy_5030 2129357 - 2127315 - | TonB-dependent receptor TERM 1812 2129218 - 2129251 + g 84 -13.9 -3.57144 | gap 1, overlap 2129214 AGCAGGTCGTTCGTC GCGACGCGCGGCATCG TAT CGATG-TGCGCGTCCC TTTCCGCCTGGCCAG TERM 1813 2129346 - 2129310 - G 74 -15.2 -2.58714 | gap 1, overlap 2129306 GGCGAGAGGAAGGCA GCGCAGT-CCGCGCCAG ACAT CTCGCGCGGTACTACGC GAATTACACATCTCG Bphy_5031 2129621 - 2130148 + | GCN5-related N-acetyltransferase Bphy_5032 2130267 - 2130737 + | transport-associated TERM 1814 2130839 - 2130799 - T 100 -19 -3.53012 | overlap 2130805 TTGCGGCTTCCCAAA TACCAACGCCACTGCGCC TCGAC GGCGCAGTGGCGCGGGAA GAAGCTCGGCGCGGC TERM 1815 2130833 - 2130805 - T 100 -21.8 -3.45571 | overlap 2130799 CTTCCCAAATACCAA CGCCACTGCGCC TCGAC GGCGCAGTGGCG CGGGAAGAAGCTCGG Bphy_5033 2132602 - 2130857 - | redoxin domain-containing protein TERM 1816 2132018 - 2132042 + g 76 -13.6 -3.07816 | gap 1, opp_overlap 2132009 CATGAAGCGGCGCAC GCGCTCGC-CG AAGC CGAGCGAGCGC TTGAGTCCGTCGAGC TERM 1817 2132644 - 2132662 + r 89 -16 -3.31322 | overlap 2132654 ATGGTTCAACCGGTT GGCCACGC ATC GCGTGGCC TTGTGCAGGATTAGA TERM 1818 2132812 - 2132780 - R 79 -12.7 -3.38339 | gap 1, opp_overlap 2132774 2132769 2132783 ACGAGGCAAGACGAA CGCCACGGCTGCGC GTGAAG GCGC-GCCGTCGCG TCAGGCGTGTTGCAT TERM 1819 2133049 - 2133008 - R 71 -11.6 -3.20382 | gap 1 GGTCAGATTGAGCAA CTGGTCGAGCAGGATCACG TCGGG CGTG-TCCCGCTCGACACG ACGTGCATGTCGCGC TERM 1820 2133049 - 2133096 + r 100 -12.1 -4.59773 | gap 3, opp_overlap 2133051, overlap 2133051 TGTCCCGCTCGACAC GACGTGCATGTCGCG-CCCGCTCG ACG CGAGCGTGACGCG-CATGC-CGTA TTTTTGCAGATAGGC TERM 1821 2133051 - 2133094 + r 100 -14.7 -3.91506 | gap 3, opp_overlap 2133051, overlap 2133049 TCCCGCTCGACACGA CGTGCATGTCGCG-CCCGCTCG ACG CGAGCGTGACGCG-CATGC-CG TATTTTTGCAGATAG TERM 1822 2133094 - 2133051 - R 85 -16.9 -2.62184 | gap 3, opp_overlap 2133049 2133051 TCCCGCTCGACACGA CGTGCATGTCGCGCC-CGCTCG ACG CGAGCGTGACGCG-CATGC-CG TATTTTTGCAGATAG Bphy_5035 2134272 - 2133229 - | alpha/beta hydrolase fold protein TERM 1823 2134644 - 2134663 + H 100 -8.5 -4.9725 | opp_overlap 2134644, overlap 2134633 CCATGTCCTCGCAAA GGGCTGC ATTTTC GCGGCCC TTTTTGTATCCCAAT Bphy_5036 2134815 - 2135840 + | alpha/beta hydrolase fold protein Bphy_5037 2136011 - 2137870 + | dihydroxy-acid dehydratase TERM 1824 2137908 - 2137939 + T 85 -15.2 -3.12351 | opp_overlap 2137914, overlap 2137914 TTCGCGCCCGCTTGT GATGAAGGCCGCTC AGCA GAGCGGCCTTTTTC TTGCCTGTCGCGCGG TERM 1825 2137933 - 2137914 - T 85 -15 -3.14132 | opp_overlap 2137908 2137914 CCCGCTTGTGATGAA GGCCGCTC AGCA GAGCGGCC TTTTTCTTGCCTGTC TERM 1826 2137914 - 2137933 + T 100 -15 -5.12068 | opp_overlap 2137914, overlap 2137908 CCCGCTTGTGATGAA GGCCGCTC AGCA GAGCGGCC TTTTTCTTGCCTGTC Bphy_5038 2138507 - 2138097 - | hypothetical protein TERM 1827 2139089 - 2139048 - R 100 -18.1 -3.70853 | gap 1, overlap 2139053 CGAAGCACCGAAGAA GGAGAGGGCGTTCGCTTGCG AGA CGCAAGCGAACGCCG-CTGC GCGTACAGCCTATGC TERM 1828 2139085 - 2139053 - R 100 -22.1 -3.02459 | overlap 2139048 CACCGAAGAAGGAGA GGGCGTTCGCTTGCG AGA CGCAAGCGAACGCCG CTGCGCGTACAGCCT Bphy_5040 2139937 - 2139110 - | NLPA lipoprotein Bphy_5041 2141210 - 2140455 - | hypothetical protein Bphy_5042 2142577 - 2141375 - | integral membrane sensor signal transduction histidine kinase Bphy_5043 2143716 - 2142805 - | LysR family transcriptional regulator Bphy_5044 2145033 - 2143783 - | acyl-CoA dehydrogenase domain-containing protein Bphy_5045 2145821 - 2145057 - | short-chain dehydrogenase/reductase SDR TERM 1829 2145620 - 2145675 + g 72 -12.7 -3.10464 | gap 3, overlap 2145666 CCTCCATGCGGCCGA CGTGGCACGCGAACGCCTCCGCGCTG CCACCCC CTGCGCGGATG-GTT-GCG-GCCACG TGTTCGCATTCGTCG Bphy_5046 2146890 - 2145862 - | aminoglycoside phosphotransferase Bphy_5047 2147592 - 2146915 - | phosphoglycerate mutase Bphy_5048 2148057 - 2147824 - | hypothetical protein Bphy_5049 2148629 - 2148165 - | AsnC family transcriptional regulator Bphy_5050 2148737 - 2149393 + | lysine exporter protein LysE/YggA Bphy_5051 2149603 - 2149430 - | hypothetical protein Bphy_5052 2149775 - 2150095 + | hypothetical protein Bphy_5053 2150670 - 2150164 - | helix-turn-helix domain-containing protein TERM 1830 2150557 - 2150568 + g 74 -2.2 -4.83615 | GCCCGTCAGCACGGA CGGA TCGA TCTG TTTTTCTGCCGCGTG Bphy_5054 2150963 - 2152522 + | peptidase S53 propeptide Bphy_5055 2152674 - 2154338 + | peptidase S10 serine carboxypeptidase TERM 1831 2154427 - 2154378 - f 77 -10.7 -3.86897 | gap 1, overlap 2154379 2154388 TGCAGCCGGTAGAAA TGCCGCAAGACGGGGCATCGCA GCCTGAT TGCGATGCCCC-CGATGCGGCC AGCATCGCAAAAACA TERM 1832 2154426 - 2154379 - f 82 -14.2 -2.91924 | gap 1, overlap 2154378 2154388 GCAGCCGGTAGAAAT GCCGCAAGACGGGGCATCGCA GCCTGAT TGCGATGCCCC-CGATGCGGC CAGCATCGCAAAAAC TERM 1833 2154418 - 2154388 - f 76 -12.6 -3.05562 | overlap 2154379 2154378 AGAAATGCCGCAAGA CGGGGCATCGCA GCCTGAT TGCGATGCCCCC GATGCGGCCAGCATC TERM 1834 2154458 - 2154441 - f 70 -4 -4.63527 | opp_overlap 2154451, overlap 2154443 CCAGCATCGCAAAAA CACGGC GATTCA GCCGGG CCGTATTTACGGCAC TERM 1835 2154612 - 2154665 + G 100 -18.9 -3.45849 | gap 2, overlap 2154613 2154622 2154648 2154652 TATCCATCGTCTGCG ACGCC-CGCCGCGT-CGCGTGCTGC GCGCGA GCGGCATGCGTGCGCGGCGTGGCGC TTGTCGTCATGTCGG TERM 1836 2154613 - 2154664 + G 100 -22.4 -2.67188 | gap 2, overlap 2154612 2154622 2154648 2154652 ATCCATCGTCTGCGA CGCC-CGCCGCGT-CGCGTGCTGC GCGCGA GCGGCATGCGTGCGCGGCGTGGCG CTTGTCGTCATGTCG Bphy_5056 2154542 - 2155153 + | hypothetical protein Bphy_5057 2155257 - 2155601 + | hypothetical protein Bphy_5058 2155726 - 2155998 + | hypothetical protein Bphy_5060 2156787 - 2157728 + | hypothetical protein Bphy_5061 2158639 - 2157758 - | hypothetical protein TERM 1837 2157914 - 2157880 - G 78 -13.4 -3.51934 | overlap 2157878 2157881 2157883 GCGGCGCGAGAAACA GCAGCGCGGTCGCGCG CGA CGCGTCACCGCGCCGG ACCATCCACACGAGC TERM 1838 2157913 - 2157881 - G 81 -16.9 -2.70946 | overlap 2157878 2157880 2157883 CGGCGCGAGAAACAG CAGCGCGGTCGCGCG CGA CGCGTCACCGCGCCG GACCATCCACACGAG TERM 1839 2157911 - 2157883 - G 80 -15.9 -2.89797 | overlap 2157881 2157878 2157880 GCGCGAGAAACAGCA GCGCGGTCGCGCG CGA CGCGTCACCGCGC CGGACCATCCACACG TERM 1840 2158192 - 2158154 - G 73 -15.2 -2.52676 | CACGGCGGCAATCGA CACGCCGACGACGAGCCA TTG CGGCACGTCGCCCGCATG ACCTTGCGCGGCGAA Bphy_5062 2160300 - 2158744 - | hypothetical protein TERM 1841 2159549 - 2159492 - G 100 -25.7 -2.78384 | gap 1, overlap 2159501 TGTTCGGTGACCACA GCGACGATATGCTCGGCGAGCGGCGCGA GCT TCACGCCGCTCGCCGA-CAGACCGCCGA GGTCGAGCGCGGGCA TERM 1842 2159540 - 2159501 - G 100 -25.2 -2.82193 | gap 1, overlap 2159492 ACCACAGCGACGATA TGCTCGGCGAGCGGCGCGA GCT TCACGCCGCTCGCCGA-CA GACCGCCGAGGTCGA TERM 1843 2159880 - 2159924 + g 81 -11.4 -4.08216 | gap 2, overlap 2159881 CGCGATGGCCGTTGA TCGGCT-CGGCGAGCCG-CGCG ACG TGCGTCTGCTCGGCGAAGCCGG TTTTCGCGGGCGTCA TERM 1844 2159881 - 2159923 + g 72 -12.7 -3.04715 | gap 2, overlap 2159880 GCGATGGCCGTTGAT CGGCT-CGGCGAGCCG-CGCG ACG TGCGTCTGCTCGGCGAAGCCG GTTTTCGCGGGCGTC Bphy_5063 2160582 - 2161337 + | DeoR family transcriptional regulator Bphy_5064 2162465 - 2161353 - | 2-aminoethylphosphonate--pyruvate transaminase TERM 1845 2162831 - 2162818 - g 78 -4.5 -4.84274 | GAACGACATGAAAAA GACGG ATCA CCATC GCTCGACGGGTCACA Bphy_5065 2162810 - 2163907 + | 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein TERM 1846 2164458 - 2164446 - g 70 -4.7 -4.41348 | overlap 2164447 2164448 TTTCGGCGAAAGAAA TCGCG CGG CGCGT CGCCGATGCGCTGAA Bphy_5066 2164031 - 2165134 + | 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT Bphy_5067 2165112 - 2166035 + | 2-aminoethylphosphonate ABC transporter, permease protein TERM 1847 2166422 - 2166457 + G 73 -11.8 -3.39142 | gap 1, overlap 2166424 ATCGCGATGATGCCC AACGGCG-TGCCGAGCG TGG TGCTCGGCCTCGCCGTG TTGATTGCGTATCAC TERM 1848 2166424 - 2166455 + G 78 -14.4 -3.26366 | gap 1, overlap 2166422 CGCGATGATGCCCAA CGGCG-TGCCGAGCG TGG TGCTCGGCCTCGCCG TGTTGATTGCGTATC Bphy_5068 2166035 - 2166895 + | 2-aminoethylphosphonate ABC transport system, membrane component PhnV TERM 1849 2166919 - 2166950 + F 71 -11.4 -3.19602 | overlap 2166917 2166920 GTTTCCTGATTTTTT CGCGAGGTGCGTCG AGGT CGGCGCGCCGCGCA TATTGATGTGGCAAA TERM 1850 2166920 - 2166949 + F 81 -14.9 -2.51547 | overlap 2166919 2166917 TTTCCTGATTTTTTC GCGAGGTGCGTCG AGGT CGGCGCGCCGCGC ATATTGATGTGGCAA Bphy_5069 2166976 - 2167719 + | GntR family transcriptional regulator TERM 1851 2167750 - 2167732 - f 81 -11 -3.82604 | overlap 2167734 TGATCGAATCAAGAA CACGCGTC GGC GACGCGTA GGGAAGAGTGCAAAT TERM 1852 2167748 - 2167734 - f 74 -11.4 -3.4945 | overlap 2167732 ATCGAATCAAGAACA CGCGTC GGC GACGCG TAGGGAAGAGTGCAA TERM 1853 2168274 - 2168264 - g 74 -2.4 -4.77079 | GACACACGAAGAAAA CGGC ATC GACG AAGTGCTGGGTCTCG Bphy_5070 2167764 - 2169035 + | phosphonoacetate hydrolase TERM 1854 2169487 - 2169511 + G 76 -14.3 -3.05596 | GCGCGATCCGCTCGC GGGGGTGATCG TCG CGATCACCCCG TTCAATCACCCGATG Bphy_5071 2169032 - 2170489 + | phosphonoacetaldehyde dehydrogenase TERM 1855 2170853 - 2170884 + G 71 -7.3 -4.07568 | gap 1, overlap 2170842 GATGCTGTCGGCGGA TTCCGTCC-GCAGT CTTGA ACTGCAGGGCGGCA TTTTCAGCGACGACG Bphy_5072 2170494 - 2171054 + | hypothetical protein TERM 1856 2171157 - 2171132 - g 93 -6.7 -5.22312 | opp_overlap 2171152 ACGCATATCAAAAAA GCGCTTGCAAG TGCT CACGCGAGCGC CTAGAATTCCGCTCT Bphy_5073 2171070 - 2171372 + | hypothetical protein TERM 1857 2172029 - 2172007 - T 79 -5.4 -4.86731 | TGTCCGGAAAGAAAA CTTCGCCGCC AAT AGCGGTGGAG GATGACGGTACCGGA TERM 1858 2174196 - 2174185 - T 71 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAACAGATCCT TERM 1859 2176883 - 2176846 - T 84 -15.5 -2.87344 | opp_overlap 2176847 CAGGCTCCTTATACA TCGCCATGACCCCGCCC TCAA AAGCGGGGTCTTGGCGT TTGTGCGGCCGATGT TERM 1860 2176847 - 2176882 + T 100 -17.6 -3.86015 | opp_overlap 2176846 AGGCTCCTTATACAT CGCCATGACCCCGC CCTCAAAA GCGGGGTCTTGGCG TTTGTGCGGCCGATG Bphy_5074 2178097 - 2177099 - | LysR family transcriptional regulator TERM 1861 2179519 - 2179555 + G 93 -18 -3.35679 | gap 1 GGTCGCGTGCACGTT CGCGCGCACGGCGGCCG TGGT CGGC-GCTGTGAGCGCG TTCTGGATCGCGACG TERM 1862 2179819 - 2179837 + G 81 -3 -5.06505 | opp_overlap 2179809, overlap 2179822 GAAGACCGCGGGCTA CGGCGTGG GCT TCACGGTG TTTTTCTGTCTGCTT Bphy_5075 2178296 - 2180476 + | fusaric acid resistance protein region TERM 1863 2180582 - 2180593 + F 75 -5.8 -4.57073 | opp_overlap 2180582 CATATATTGAAACCA CTGC TTAC GCAG TTTTTGAAACAACTG Bphy_5076 2180620 - 2180841 + | hypothetical protein Bphy_5077 2180978 - 2182492 + | succinate CoA transferase Bphy_5078 2183672 - 2182512 - | metallophosphoesterase TERM 1864 2184088 - 2184074 - g 72 -3.4 -4.68539 | overlap 2184075 2184076 ATGAAAACGACAAAA TCCGCG CAT CGCGAG CATCACATCGGCTAT TERM 1865 2184139 - 2184184 + G 72 -8.2 -4.11484 | gap 1 GCCTATGGTCGTGCT GTCGCTGATGGCGCTCGGCGT CTACT ACGGCGTGCGC-ACCATCGAC TTTTCCGAGCTTGGC Bphy_5079 2184059 - 2184373 + | hypothetical protein TERM 1866 2184407 - 2184395 - f 72 -9.1 -3.90112 | CCGCGGCGAATGAAA GCGCA AGC TGCGC GGCGACGCGCATCCA TERM 1867 2184489 - 2184462 - f 72 -9.9 -3.63744 | gap 1, overlap 2184460 2184463 CTTCCCTGGAAAAGA GTGTCGCGAGCA CTCTC CGCTCGCGAC-C GTAAGCCGATGTCCA Bphy_5080 2184498 - 2185088 + | 2OG-Fe(II) oxygenase Bphy_5081 2186090 - 2185155 - | malonate decarboxylase, epsilon subunit Bphy_5082 2186803 - 2186090 - | hypothetical protein TERM 1868 2186768 - 2186722 - G 76 -9.3 -4.11216 | gap 2, overlap 2186723 TGCGGACTCGCAAAA TGTCG-TGCGCCCGCCAGC-GCG GAT CGCTGACGGCGAGCGCATCGGCG GCCGGGAACGGCGCA TERM 1869 2186767 - 2186723 - G 72 -12.8 -3.06515 | gap 2, overlap 2186722 GCGGACTCGCAAAAT GTCG-TGCGCCCGCCAGC-GCG GAT CGCTGACGGCGAGCGCATCGGC GGCCGGGAACGGCGC Bphy_5083 2187618 - 2186800 - | malonate decarboxylase, gamma subunit TERM 1870 2186845 - 2186861 + g 93 -13.7 -4.08767 | CCGCCGCACTTCGAT CGACGCG GCG CGCGTCG TTTTCGCCCACTCCG TERM 1871 2187631 - 2187648 + r 75 -10.5 -3.75153 | overlap 2187630 CATGATTGCTCCTTG CGCGGCG CAGC CGCTGCG TTTGCGTTGAACACG Bphy_5084 2188505 - 2187615 - | malonate decarboxylase, beta subunit TERM 1872 2187805 - 2187859 + g 74 -15 -2.62184 | gap 1, overlap 2187818 CGCACGGCGTGCGCG TCGTCGGCGACGAGCGCATCGGCGA GTCCCG TCGCC-ACGCGCTGTTCGCCGCCGA TCATCTGCCACACAC Bphy_5085 2188807 - 2188502 - | malonate decarboxylase acyl carrier protein Bphy_5086 2189763 - 2188813 - | triphosphoribosyl-dephospho-CoA synthase MdcB TERM 1873 2188934 - 2188991 + g 86 -14.6 -3.53012 | gap 1, opp_overlap 2188911 TCGAGTGCATCGAGC GCGGCGCGTCCCGCCGCCGTCGATGCG CCGCC CGCCGCGAGCACGGCGCG-CGCGCCGC TTTGGCCCGCGCGCA TERM 1874 2189093 - 2189144 + g 76 -14.3 -3.05384 | gap 1 ACACGCGCCGTGTTC TCGCCGGTGCCCTGCGCGCGC-GC CGCGC GCAGCGCGGGCAGGCCGACGTCGA TTACGTGCGGAAAAC Bphy_5087 2191459 - 2189768 - | malonate decarboxylase, alpha subunit TERM 1875 2191486 - 2191538 + r 89 -17.7 -2.71681 | overlap 2191491 2191493 2191527 CTCCCGATAGTGGTT GGAGTGCGCGCCGGCCGC-CCGCGC TTTCT GCGCGGCGCGGCCGCGGCG-GCTTC TGCTTGCGCGCGTTC TERM 1876 2191491 - 2191535 + r 91 -17.1 -3.50853 | gap 2, overlap 2191486 2191493 2191527 GATAGTGGTTGGAGT GC-GCGCCGGCCGC-CCGCGC TTTCT GCGCGGCGCGGCCGCGGCGGC TTCTGCTTGCGCGCG Bphy_5088 2192249 - 2191467 - | GntR family transcriptional regulator TERM 1877 2191493 - 2191509 + g 73 -9.3 -3.85698 | overlap 2191491 2191486 TAGTGGTTGGAGTGC GCGCCGG CCG CCCGCGC TTTCTGCGCGGCGCG TERM 1878 2191859 - 2191885 + g 73 -13.6 -2.90723 | CGGCTTTGCACAGTG CGGCCGCCTCGC GCA GCGAGTCGGGCG TGTGATTCGGAATCG Bphy_5089 2192422 - 2193729 + | major facilitator transporter Bphy_5090 2194689 - 2193766 - | hypothetical protein TERM 1879 2194921 - 2194946 + G 71 -3.9 -4.56597 | gap 1, opp_overlap 2194919 CATGCAGATCAAGCG GC-TCGAGCGGA TGC TCGGCACGACGC TTTTTGCGCGCGACA Bphy_5091 2194796 - 2195683 + | LysR family transcriptional regulator Bphy_5092 2195931 - 2196602 + | hypothetical protein Bphy_5093 2196841 - 2197671 + | arylamine N-acetyltransferase TERM 1880 2197845 - 2197869 + G 72 -8.5 -4.00042 | TCGCCGGCTACGACC CCGGGTTGCTC GCA GAGCGGCTTGG TTCTTTCGTGCAGCG Bphy_5094 2197682 - 2198359 + | isoprenylcysteine carboxyl methyltransferase TERM 1881 2198381 - 2198399 + F 85 -3 -5.42198 | TAGTCTGTGACGCAG TCGCCACC CCG GGTTCCGA TTTTGTTTTTTGCCA TERM 1882 2199549 - 2199501 - g 74 -10.3 -3.75024 | gap 1, overlap 2199498 GCGCATTACGAAGAA GCGCGCCGCGATCTCGACGA ACTGGCGACG CCATCG-GACCCCGGCGCGC CGATTCATCCGCAGT TERM 1883 2200052 - 2200022 - g 71 -4.4 -4.56597 | overlap 2200024 CGGTGCGCTGAAAAA GGCGTTCGCGCACC AGG GGCCCGCGCTCGTC GACGTCGTCACCGCG Bphy_5095 2198478 - 2200199 + | thiamine pyrophosphate binding domain-containing protein Bphy_5096 2200252 - 2200566 + | hypothetical protein Bphy_5097 2200563 - 2200820 + | hypothetical protein TERM 1884 2200870 - 2200839 - T 100 -18.1 -3.30441 | gap 1, opp_overlap 2200830 2200840 2200842, overlap 2200842 GATTATCTGCCACAA GCACACGGCGCGCC TTTTG GGCGCGCCGTGT-C GTATCTGGTGCTTGT TERM 1885 2200840 - 2200871 + T 100 -18.8 -2.98729 | gap 1, opp_overlap 2200839 2200842, overlap 2200830 2200842 ATTATCTGCCACAAG C-ACACGGCGCGCCT TTT GGGCGCGCCGTGTCG TATCTGGTGCTTGTA TERM 1886 2200842 - 2200868 + T 100 -21.6 -2.72012 | opp_overlap 2200839 2200842, overlap 2200840 2200830 TATCTGCCACAAGCA CACGGCGCGCCT TTT GGGCGCGCCGTG TCGTATCTGGTGCTT TERM 1887 2200868 - 2200842 - T 100 -20.9 -2.8294 | opp_overlap 2200842 2200840 2200830, overlap 2200839 TATCTGCCACAAGCA CACGGCGCGCC TTTTG GGCGCGCCGTG TCGTATCTGGTGCTT Bphy_5098 2201693 - 2200899 - | hypothetical protein Bphy_5099 2202135 - 2201785 - | hypothetical protein Bphy_5100 2202973 - 2203842 + | extracellular solute-binding protein TERM 1888 2203917 - 2203891 - f 76 -13.8 -2.70932 | opp_overlap 2203841 CGCCTGTTCGAACGA CCTGTTGCGATG CTG CATCGGAACAGG TCATCAGCGAAAGCA Bphy_5101 2203950 - 2204672 + | polar amino acid ABC transporter, inner membrane subunit TERM 1889 2204721 - 2204762 + G 100 -7.9 -5.53991 | gap 1, overlap 2204723 TTTCTGTTCGACACG TTGCGCCAGC-TGCTCGGCG CCG TGCCGACCACGCTGGGGCTG TTTTTTTCATCGCTG TERM 1890 2204723 - 2204760 + G 95 -12.7 -4.40552 | gap 1, overlap 2204721 TCTGTTCGACACGTT GCGCCAGC-TGCTCGGCG CCG TGCCGACCACGCTGGGGC TGTTTTTTTCATCGC Bphy_5102 2204688 - 2205440 + | polar amino acid ABC transporter, inner membrane subunit Bphy_5103 2205462 - 2206253 + | ABC transporter related Bphy_5104 2206297 - 2207901 + | phenylalanine/histidine ammonia-lyase Bphy_5105 2207968 - 2208723 + | histidine utilization repressor Bphy_5106 2209511 - 2208753 - | histidine utilization repressor Bphy_5107 2210482 - 2209616 - | ABC transporter related Bphy_5108 2211184 - 2210522 - | polar amino acid ABC transporter, inner membrane subunit TERM 1891 2210994 - 2210971 - G 100 -5.2 -5.59357 | overlap 2210984 2210985 AGTAGAGCAAAAAAA GCTGCACG AGAAACGG CGTGCCGC GAAACAGTTCGATAT Bphy_5109 2211848 - 2211198 - | polar amino acid ABC transporter, inner membrane subunit TERM 1892 2211919 - 2211902 - R 72 -5.5 -4.54727 | gap 1, overlap 2211903 2211904 CTGCGCAAACGAAAA CTGCGCAG CCG CCGCGC-G ATTCAGGGCATCAGT Bphy_5110 2212769 - 2211930 - | extracellular solute-binding protein TERM 1893 2213298 - 2213247 - g 71 -8 -4.08216 | gap 2, opp_overlap 2213223 2213288, overlap 2213287 2213288 CGATCGTGCGGAAAA GGCCGCGCGCCAGTTC--TTCGCC TTTCCC GTCGAAACGAAACGGCGCGTGGCC GTGAATCGGCGGCAT Bphy_5111 2213065 - 2214072 + | 2OG-Fe(II) oxygenase Bphy_5112 2214069 - 2215472 + | FAD linked oxidase domain-containing protein TERM 1894 2215475 - 2215527 + T 100 -23 -3.65351 | gap 1, overlap 2215473 ACTGTTTTGCTGATC GCAGGCGTGAGTTCGTCATGAATGC CGCA GCATTCATGACGAACTGTCGCC-GC TTTCAGTGCGCATCC Bphy_5113 2218928 - 2215530 - | glucose-methanol-choline oxidoreductase TERM 1895 2217195 - 2217214 + g 85 -16.4 -3.08798 | GCGCAGGCCGATCTT CGGCGCCG GCGG CGGCGCCG TGTTGCCTGCGGAGT Bphy_5114 2220045 - 2219233 - | hypothetical protein TERM 1896 2220679 - 2220697 + G 73 -13.8 -2.87132 | opp_overlap 2220672 TGGATCAACCTGCAC GCGGCGCG CGG CGCGCTGC TCTATGCCGCGCCGG Bphy_5115 2220418 - 2222247 + | integral membrane sensor hybrid histidine kinase Bphy_5116 2222568 - 2222885 + | hypothetical protein TERM 1897 2222937 - 2222959 + T 71 -12 -2.95522 | overlap 2222934 2222933 2222941 AGACCGCGTCCTGCC GAAGGCGGCG TTC TGCCGCTTTC CTTCTCTTTCTCTAA TERM 1898 2222941 - 2222955 + T 80 -9.2 -4.12405 | overlap 2222934 2222933 2222937 CGCGTCCTGCCGAAG GCGGCG TTC TGCCGC TTTCCTTCTCTTTCT Bphy_5117 2223732 - 2222971 - | two component LuxR family transcriptional regulator TERM 1899 2223232 - 2223248 + g 72 -11.5 -3.53012 | opp_overlap 2223219 GATGGGCGCCGCATC CGGCGGC GCG GCCGTCG TTTGCGCGGCGAGGG TERM 1900 2224126 - 2224171 + r 100 -18.3 -3.75295 | gap 1, overlap 2224131 CAGTGTGTTCTGGTC TCGCTCGCGCAG-CGTGACGGC GTG GCCGTCGCGGTTGCGCGTGTGG TTTCCCTGGTTTGTG TERM 1901 2224131 - 2224166 + r 100 -19.8 -3.02591 | gap 1, overlap 2224126 TGTTCTGGTCTCGCT CGCGCAG-CGTGACGGC GTG GCCGTCGCGGTTGCGCG TGTGGTTTCCCTGGT TERM 1902 2224274 - 2224307 + r 100 -14.5 -3.86897 | gap 1, overlap 2224275 GGAAGTATTTTGAAG GCGGCCGGGCGGCCTC GCG GAG-CCGCCCGGCAGG TTTATGCGCGGTGGA TERM 1903 2224275 - 2224306 + r 90 -18 -2.91924 | gap 1, overlap 2224274 GAAGTATTTTGAAGG CGGCCGGGCGGCCTC GCG GAG-CCGCCCGGCAG GTTTATGCGCGGTGG Bphy_5118 2224540 - 2224388 - | hypothetical protein Bphy_5119 2225519 - 2224518 - | cytochrome d ubiquinol oxidase, subunit II Bphy_5120 2226946 - 2225549 - | cytochrome bd ubiquinol oxidase subunit I TERM 1904 2227366 - 2227348 - R 78 -6.6 -4.6951 | opp_overlap 2227350, overlap 2227350 AGTAGGCAAAAGAAA GCCGCTCA CAC CGAGCGTC TTGACGTTGACCCAC TERM 1905 2227820 - 2227788 - R 76 -4.6 -4.86731 | overlap 2227791 CCGCGGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACGCCAGC AAACCGGGAGCAAAA TERM 1906 2227912 - 2227901 - R 74 -2.2 -4.88217 | gap 1, overlap 2227903 2227904 2227908 AGCAAAAAACCAAAA CAGGC AAC GCC-G CGCCGCAGGCAAAAC Bphy_5121 2229257 - 2227956 - | xanthine/uracil/vitamin C permease TERM 1907 2228956 - 2228942 - G 74 -12.8 -3.1978 | overlap 2228940 AGCCCGAGATGAACA CCGCGC CGA GCGCGG CCTGCCACGTGAAGC TERM 1908 2229204 - 2229177 - G 73 -9.8 -3.87815 | opp_overlap 2229197 GGCCATTGTGAGAAA CGTGGTGATGCC CGCG AGCACCTCCACG CGCAGGTTCGTGCCT TERM 1909 2229324 - 2229343 + r 75 -10 -3.75015 | gap 1 CGTTCTCTTGCCGCT TCCGGCCCG TCA CGGGC-GGA TTTAATCACGATTGT Bphy_5122 2229878 - 2229627 - | hypothetical protein Bphy_5123 2230810 - 2230031 - | band 7 protein Bphy_5124 2232333 - 2230807 - | hypothetical protein Bphy_5125 2233638 - 2232577 - | AraC family transcriptional regulator TERM 1910 2233375 - 2233330 - G 100 -21.1 -3.15861 | gap 1, opp_overlap 2233365 2233374 TACGAGCCGCATGAA GCCGACGGCGCGCGCCAGC-GC CTG GCTGCCGTTGCGCGCCGTCAGC GCCATCTGCGTCATC TERM 1911 2234651 - 2234679 + G 73 -13.8 -2.87132 | gap 1 GCAGGCGATCGGCAT CGCGCGC-GCGGC CTTC GACGCGGCGCGCG TCTATGCGAACGAGC Bphy_5126 2233893 - 2235026 + | acyl-CoA dehydrogenase domain-containing protein Bphy_5127 2235197 - 2236903 + | AMP-dependent synthetase and ligase Bphy_5128 2236940 - 2238469 + | methylmalonate-semialdehyde dehydrogenase TERM 1912 2238990 - 2239008 + F 78 -6.6 -4.6951 | opp_overlap 2238992, overlap 2238992 GTGGGTCAACGTCAA GACGCTCG GTG TGAGCGGC TTTCTTTTGCCTACT Bphy_5129 2239173 - 2240066 + | 3-hydroxyisobutyrate dehydrogenase TERM 1913 2240732 - 2240755 + G 74 -13.2 -3.22068 | gap 1 GTGCCGCGCCCGGCC GCGCTCGCCGT CGA ACG-CGAGCGC TTCGTCGATCTGTTC TERM 1914 2240826 - 2240816 - g 84 -8.2 -4.56597 | overlap 2240817 GCGTTCCTCGAAAAA CGCG CAC CGCG ATGGCAAACCACGCA Bphy_5130 2240066 - 2240872 + | enoyl-CoA hydratase/isomerase TERM 1915 2241332 - 2241342 + G 88 -8.2 -4.64048 | overlap 2241324 TTCTGCCCGATGTCG GCGC GAC GCGC TTTCTTTCTGTGATG TERM 1916 2241926 - 2241947 + G 76 -5.7 -4.57353 | opp_overlap 2241925 2241926, overlap 2241888 CGTCGCTTGCAGAAG TGCGGCCCG AGCG CGTGCGGCA TTTTCTGTCGTCGCC Bphy_5131 2240869 - 2242020 + | enoyl-CoA hydratase/isomerase TERM 1917 2242052 - 2242081 + F 100 -16.5 -4.09685 | opp_overlap 2242057, overlap 2242053 2242057 AGGGGAAACAGCCAG AGAAACGAGGCCC GGGT GGGCCTCGTTTCG TTTTGCCGGCTAAAC TERM 1918 2242053 - 2242080 + F 100 -20 -3.05597 | opp_overlap 2242057, overlap 2242052 2242057 GGGGAAACAGCCAGA GAAACGAGGCCC GGGT GGGCCTCGTTTC GTTTTGCCGGCTAAA TERM 1919 2242076 - 2242057 - f 100 -15 -4.09542 | opp_overlap 2242053 2242052 2242057 AAACAGCCAGAGAAA CGAGGCCC GGGT GGGCCTCG TTTCGTTTTGCCGGC TERM 1920 2242057 - 2242076 + F 100 -15 -4.19735 | opp_overlap 2242057, overlap 2242053 2242052 AAACAGCCAGAGAAA CGAGGCCC GGGT GGGCCTCG TTTCGTTTTGCCGGC Bphy_5132 2242416 - 2242967 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 1921 2243235 - 2243178 - g 71 -14.2 -2.72144 | gap 3, overlap 2243177 2243180 CGATCGCGTCGAAAC CACCGACGAGGGCGGCGT-GCGCATCGGC GCG ACCG-TGCGCAATGCCGACCTCG-CGCTG CATCCGCTGATCCAC Bphy_5133 2242978 - 2243979 + | molybdopterin dehydrogenase FAD-binding TERM 1922 2245248 - 2245222 - g 74 -2 -4.83169 | overlap 2245224 ACGGGCGCAGAAAAA TTCGGCTGGGCG CAG CGCACGGCGGCA GTCGGCTCCATGACG TERM 1923 2245808 - 2245782 - g 84 -8.7 -4.57569 | CGATCCGCTCAAAAA GCACCATTCGA TCTAC TCGTATGGCGC GCATTTCGCCGAGGT Bphy_5134 2244001 - 2246229 + | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Bphy_5135 2247529 - 2246261 - | major facilitator transporter TERM 1924 2246288 - 2246318 + g 100 -20.4 -3.40403 | GACCGCTTCGGGGCT CGCAGCAGGCGTCG CCG CGGCGCCCGCTGCG TTGTGCTCGCCCGCA TERM 1925 2246384 - 2246366 - G 74 -10.2 -3.69323 | CCACCAGCACGCAAA CACGGCCG CTG CAGCCGCG AGCCACCCGACCGTG TERM 1926 2246528 - 2246507 - G 76 -14.4 -3.14132 | opp_overlap 2246506 2246507 GTTCGCGCTCAGGAA CGCGCCGC GCGTTT GCGGCGCG GGGACGGTCGTGAGC Bphy_5136 2248394 - 2247558 - | FAD-binding 9 siderophore-interacting domain-containing protein TERM 1927 2248162 - 2248176 + g 81 -12.8 -3.65991 | CCATCGGGGCCCATT GCCGGC AGC GCCGGC TTGTCTTCGCCGGGT Bphy_5137 2249175 - 2248411 - | PadR-like family transcriptional regulator TERM 1928 2248470 - 2248506 + g 71 -10.8 -3.62046 | overlap 2248472 2248497 2248498 TGCTTTCGATTTCGG CCGTGGCGCG-CGCGAGG ATC CC-CGCGATGCGCCGCTG TTCTTCCGGCGATGC TERM 1929 2248472 - 2248504 + g 73 -12 -3.38991 | overlap 2248470 2248497 2248498 CTTTCGATTTCGGCC GTGGCGCG-CGCGAGG ATC CC-CGCGATGCGCCGC TGTTCTTCCGGCGAT TERM 1930 2249920 - 2249906 - g 75 -10 -3.86835 | opp_overlap 2249911, overlap 2249898 2249909 GCAAAGACTACGAAA CGATCG TCG CGATCG ACTACTTCCCGGGCG Bphy_5138 2249503 - 2250501 + | chromate resistance exported protein Bphy_5139 2250498 - 2251682 + | chromate transporter Bphy_5140 2251883 - 2252383 + | hypothetical protein Bphy_5141 2252446 - 2252877 + | ChrB protein TERM 1931 2253657 - 2253691 + G 74 -2.6 -4.82901 | overlap 2253660 2253661 2253661 2253662 TGTGGCTCATGCAAC GCTTCGGCCTGCCG GTTGGTG CGGCGGGCCAGTTC TTTTTCTGGGCAGAA TERM 1932 2253661 - 2253688 + G 84 -8.4 -4.52873 | gap 1, overlap 2253660 2253657 2253661 2253662 GCTCATGCAACGCTT C-GGCCTGCCG GTTGGTG CGGCGGGCCAG TTCTTTTTCTGGGCA Bphy_5142 2252864 - 2254120 + | major facilitator transporter TERM 1933 2254711 - 2254701 - g 79 -6.8 -4.57569 | GGAGGGTGTCAAAAA GGTC TAC GACC GGATAGCGGAGGTCC Bphy_5143 2254243 - 2255166 + | protein of unknown function LppY and LpqO Bphy_5144 2256395 - 2255379 - | alpha/beta hydrolase fold protein TERM 1934 2255796 - 2255775 - G 70 -2.1 -4.65895 | GCGTTGACGCAAAAA CGCCTGCGA AAAT CCCCAGCCG GCAAACACACGGGCA Bphy_5145 2258112 - 2256409 - | polar amino acid ABC transporter, inner membrane subunit TERM 1935 2258129 - 2258169 + r 80 -9.7 -4.20516 | gap 1, opp_overlap 2258125 TCCGAACATGATCCA TGACGCTGC-CGGCACGC GACGTG GTGTGCCGCGCAGCAGCA TTTATTGAGTAAGCA Bphy_5146 2259028 - 2258171 - | extracellular solute-binding protein Bphy_5147 2260000 - 2259098 - | polysaccharide deacetylase Bphy_5148 2262514 - 2260139 - | AraC family transcriptional regulator TERM 1936 2260317 - 2260327 + g 80 -5.4 -4.72272 | opp_overlap 2260298 TCGCGCATCGCGAGG TCGA GGG TCGA TTTTTCATACACCGC Bphy_5149 2263683 - 2262652 - | acetamidase/formamidase TERM 1937 2262774 - 2262832 + g 91 -8.9 -4.72986 | opp_overlap 2262772 2262746, overlap 2262777 2262821 TCATCAGCGAATACG CGTCGTCACGCGAGAGGC-CTTGCTGCTC GGT GAGCAACAACAGCATATCGCGTGAAG-CG TTTTTCGTCGCGATG TERM 1938 2264131 - 2264161 + G 70 -11.1 -3.41738 | gap 1, overlap 2264132 AAACGTAGTGCTTTT CGGCGCTG-CCACG AGTT CGTCGTCGGCGCCG TCTGTTTGTTGGCAC Bphy_5150 2264074 - 2265003 + | extracellular solute-binding protein Bphy_5151 2265003 - 2266634 + | polar amino acid ABC transporter, inner membrane subunit Bphy_5153 2267847 - 2267128 - | GntR domain-containing protein TERM 1939 2267772 - 2267794 + g 93 -17.8 -3.30771 | opp_overlap 2267749 2267786 TCGGCGCGAACTCCG GCTGCGCGAT CAG ATCGCGCAGC TTCTCCGCGATCTGC Bphy_5154 2268250 - 2269536 + | major facilitator transporter Bphy_5155 2269582 - 2271129 + | Altronate dehydratase Bphy_5156 2271176 - 2272423 + | L-lactate dehydrogenase (cytochrome) Bphy_5157 2272674 - 2273708 + | putative simple sugar transport system substrate-binding protein TERM 1940 2274546 - 2274590 + G 77 -15.1 -2.85354 | gap 2, opp_overlap 2274544 2274546, overlap 2274561 TCGAAGCGGACAAGA CG-GCTTCTC-CCGCGCGCGT GCGCG ACGCGCGCGGCGACGAGCGCG CTTTCCGTTGGCATG TERM 1941 2274590 - 2274546 - g 74 -12.9 -3.25192 | gap 2, opp_overlap 2274546 2274561, overlap 2274544 TCGAAGCGGACAAGA CG-GCTTCTC-CCGCGCGCGT GCGCG ACGCGCGCGGCGACGAGCGCG CTTTCCGTTGGCATG TERM 1942 2274561 - 2274591 + G 77 -11.7 -3.76393 | opp_overlap 2274546 2274544, overlap 2274546 CGGCTTCTCCCGCGC GCGTGCGCGACGC GCGCG GCGACGAGCGCGC TTTCCGTTGGCATGT TERM 1943 2274753 - 2274780 + G 83 -14.8 -3.26745 | overlap 2274751 2274748 2274754 GCGTGAGAGCCGCTT TCGTCGCGGGCG ATCG CGGCCGCGACGG TGTGTTTCCGGTCTG TERM 1944 2274754 - 2274779 + G 77 -16.1 -2.55565 | overlap 2274753 2274751 2274748 CGTGAGAGCCGCTTT CGTCGCGGGCG ATCG CGGCCGCGACG GTGTGTTTCCGGTCT Bphy_5158 2273774 - 2275255 + | ABC transporter related Bphy_5159 2275252 - 2276202 + | inner-membrane translocator TERM 1945 2276690 - 2276664 - g 76 -14.4 -3.09635 | ATTGCGATCACGCAA GGGCGGCAGC TTCCGCC GCCGCCGCCC GCGCTCGGCGCGTTC Bphy_5160 2276199 - 2277185 + | inner-membrane translocator Bphy_5161 2277234 - 2278142 + | gluconolactonase Bphy_5162 2278174 - 2279193 + | putative ABC transporter TERM 1946 2279274 - 2279229 - f 83 -14.2 -3.16742 | gap 3, opp_overlap 2279229 GGTAAGTGGCATGAA CGGGCAGATCGCGAGTCGTCGCC GCT GGC-AGGAC-CGCGATCTGC-CG CATGGATTGGAAACA Bphy_5163 2279575 - 2280150 + | carboxymuconolactone decarboxylase Bphy_5164 2280191 - 2280862 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1947 2280878 - 2280893 + F 100 -11.8 -4.41494 | overlap 2280869 2280871 GCAAACGCGCCGGCC GCCGCC TTTG GGCGGC TTTTCGTTCCCCGTG Bphy_5165 2280933 - 2281649 + | short-chain dehydrogenase/reductase SDR Bphy_5166 2282552 - 2281626 - | LysR family transcriptional regulator TERM 1948 2281716 - 2281695 - G 75 -14.5 -2.78018 | opp_overlap 2281697, overlap 2281692 2281697 ACTTTCGATGAACGA GACGAAGGC GCGC GCCTTCGTC GTTGCCATTCGGCCC TERM 1949 2282226 - 2282214 - G 79 -6.9 -4.56597 | overlap 2282222 2282223 GTGTTGGTCCAAAAA CGCAC CAA GCGCG GGGATCACGTGCAGC TERM 1950 2283439 - 2283418 - g 93 -17.3 -3.80094 | GGCAAATGAAGACAA GGCGTCGGC TCAA GCCGACGCC GACAAGAAGGCAGCG TERM 1951 2283552 - 2283540 - g 82 -5.5 -4.77567 | AGGCCGACAAGAAAA TGCAC GAC GCGCA GGCAAAGGCTGACCG Bphy_5167 2283215 - 2283697 + | myosin heavy chain TERM 1952 2283766 - 2283787 + F 85 -11.6 -4.08767 | TATGATGCGGCGCCA GGGCGAGT CTTCGT ACTCGCCC TTTTCAAGGACTGCG Bphy_5168 2283965 - 2284405 + | hypothetical protein Bphy_5169 2284772 - 2284569 - | cold-shock DNA-binding domain-containing protein Bphy_5170 2285533 - 2284856 - | response regulator receiver protein TERM 1953 2285632 - 2285645 + r 75 -9.5 -3.86015 | CAGCGTTCCGGGCCA GGCGG CCTC CCGCC TTTCTCAAGGGCCTG Bphy_5171 2287670 - 2285916 - | histidine kinase Bphy_5172 2287911 - 2288411 + | hypothetical protein Bphy_5173 2288919 - 2288638 - | hypothetical protein Bphy_5174 2289044 - 2289472 + | hypothetical protein Bphy_5175 2290011 - 2292482 + | MCP methyltransferase, CheR-type Bphy_5177 2294244 - 2293189 - | Nitrilase Bphy_5178 2294740 - 2294258 - | MarR family transcriptional regulator TERM 1954 2294358 - 2294370 + g 76 -9.1 -4.07687 | TGTGCAGCCGACCAC GCGCT CGA AGCGC TTTTGAGCAGCGCCT Bphy_5179 2295177 - 2296691 + | diguanylate cyclase Bphy_5180 2297097 - 2296858 - | hypothetical protein Bphy_5181 2297211 - 2300894 + | adenylate/guanylate cyclase Bphy_5182 2300949 - 2301206 + | hypothetical protein Bphy_5183 2301496 - 2301684 + | hypothetical protein Bphy_5184 2304681 - 2301862 - | multi-sensor hybrid histidine kinase Bphy_5185 2305811 - 2304678 - | putative signal peptide protein TERM 1955 2306963 - 2306991 + H 72 -6.2 -4.27316 | gap 1, opp_overlap 2306952 2306970 AAGCGGGTTCGCGCT GCGAAG-ACAAAA GCCT TTTTGTGCTTTGC TTTTCAGTTCAGCAG Bphy_5188 2307403 - 2308329 + | hypothetical protein Bphy_5189 2309680 - 2308373 - | major facilitator transporter TERM 1956 2309105 - 2309088 - G 70 -5.5 -4.2123 | GACTCAGGCAAGAAA CGCAATG CGAC CAGTGCG ACGAGGATCGCGGGT TERM 1957 2309336 - 2309313 - G 91 -8.8 -4.83169 | gap 1, overlap 2309315 ACGCCGGGATAAAAA CCCGCTTCGGC GAC GCCG-AGCGCG AACCGGAACACATAG TERM 1958 2309505 - 2309495 - G 93 -4.6 -5.26918 | ATAGCCGATAAAAAA GAGC GAT GCCC CGAGGCCGTACGACG TERM 1959 2309624 - 2309634 + g 76 -2.4 -4.86731 | opp_overlap 2309614 CAGAAGCGGCATGAG CCGC CAG GCGA TTTTCTTTACGACAG Bphy_5190 2309837 - 2310559 + | GntR family transcriptional regulator TERM 1960 2311262 - 2311204 - g 100 -21.8 -3.14132 | gap 2, opp_overlap 2311218 2311219, overlap 2311208 CGCGGCGTCCAGGAA CCCATCGCGCCGGCACCCGCAGCGCACG ACGTG CGGGCGCTGCGGGTGCCGGCA-ACTGG- CGTGATCGGCGGGAT TERM 1961 2311260 - 2311208 - g 100 -22.6 -2.56596 | opp_overlap 2311218 2311219, overlap 2311204 GCGTCCAGGAACCCA TCGCGCCGGCACCCGCAGCGCACG ACGTG CGGGCGCTGCGGGTGCCGGCAACT GGCGTGATCGGCGGG Bphy_5191 2310622 - 2311914 + | major facilitator transporter Bphy_5192 2311966 - 2312841 + | amidohydrolase 2 TERM 1962 2313805 - 2313792 - g 71 -8.1 -4.07568 | opp_overlap 2313774 TGGTGTTCGTCAAAA CACGC ACTG GCGTG GATTACCTGGCGGCC TERM 1963 2314452 - 2314402 - g 71 -12.4 -3.1876 | AAGGCCACGCAGCAA GCCCGCCCGCCAGCCGGTTGCGGC TGC GCGACAACCTGCTGGCAAAGGCGC TGGTGGCCGAGGCAA Bphy_5193 2313035 - 2314480 + | DEAD/DEAH box helicase domain-containing protein TERM 1964 2314907 - 2314919 + G 70 -4.8 -4.38712 | TTCGCGACACGCTGG TCGG GGCCG CCGA TTTTCTGAACGTCGG Bphy_5194 2314660 - 2315787 + | glutamate--cysteine ligase GCS2 Bphy_5195 2317667 - 2315934 - | EmrB/QacA family drug resistance transporter TERM 1965 2317191 - 2317160 - G 71 -10 -3.56837 | gap 1 GTGCAAATAGCAGAA CGGGCAGCGACGGCG CGA CGCCG-CACAGCCAG GACGCGATCACGAAA Bphy_5196 2317933 - 2318262 + | hypothetical protein TERM 1966 2318376 - 2318388 + F 73 -3.3 -4.82901 | overlap 2318372 GCTCTGTACCGTCGT GCTCG GTG CGATC TTTTTCTGGAAGCGA TERM 1967 2318453 - 2318465 + F 95 -6.3 -5.55664 | opp_overlap 2318453 AAGAGGAGCAATAAA TCACA GGG TGTGA TTTTTTTCGTGATGA TERM 1968 2318465 - 2318453 - f 72 -6.3 -4.28713 | opp_overlap 2318453 AAGAGGAGCAATAAA TCACA GGG TGTGA TTTTTTTCGTGATGA TERM 1969 2319922 - 2319901 - g 93 -6.5 -5.11033 | gap 1, opp_overlap 2319902, overlap 2319892 CAGAAGGCGAAAAAA CCGCGCTCGC ATG GCGAG-GTGG CGATTGTGACGGGCT Bphy_5197 2318659 - 2321172 + | type VI secretion system Vgr family protein Bphy_5198 2321175 - 2323505 + | hypothetical protein Bphy_5199 2324299 - 2324571 + | hypothetical protein Bphy_5200 2324552 - 2325160 + | hypothetical protein TERM 1970 2325770 - 2325809 + G 72 -8.5 -4.07885 | gap 1, opp_overlap 2325782 GATGTCGCTGCATCA CGTGGCGAC-GAATCCGC AGGGC GCGGCTGCCGTCGTCGCG TTTTCCGGGCGGCTC Bphy_5201 2325222 - 2326055 + | phospholipase/carboxylesterase TERM 1971 2326280 - 2326293 + F 72 -6.7 -4.36914 | overlap 2326273 ACATTTCCGCTGCCG GTGAG GCAG CTCAC TTTTCTCAGAAGAGC TERM 1972 2327016 - 2326995 - g 70 -2.2 -4.66953 | overlap 2327000 GGAACACGTGAAAAA GACGATTG GCTCGG CACTCGCC GTCGTGCCGGCCGAG Bphy_5202 2326315 - 2327370 + | cell shape determining protein MreB TERM 1973 2327472 - 2327499 + F 100 -15 -4.57516 | gap 1, overlap 2327469 GAATGAAGCCTTTGC GGCGCGCATT-TC ATG GATAATGCGCGCC TTTTCATTTGCGTCT Bphy_5203 2327576 - 2328358 + | alpha/beta hydrolase fold protein Bphy_5204 2328778 - 2328374 - | hypothetical protein TERM 1974 2328833 - 2328811 - H 100 -16.3 -5.03314 | CTGACTTTTAAAAAA GACCCGCCG TTGTG CGGCGGGTC CAAGACAGCAATGTG Bphy_5205 2329187 - 2330488 + | citrate synthase I TERM 1975 2330588 - 2330548 - f 71 -10.3 -3.54424 | opp_overlap 2330551, overlap 2330549 CGGCATTGTCTGAAA GCGCAGGCGCCACTCCC GCAAGAG GGGAGCGGCGCCTGTTT TCATTTGCGCCGCCG TERM 1976 2330587 - 2330549 - f 76 -13.8 -2.72511 | opp_overlap 2330551, overlap 2330548 GGCATTGTCTGAAAG CGCAGGCGCCACTCCC GCAAGAG GGGAGCGGCGCCTGTT TTCATTTGCGCCGCC TERM 1977 2330551 - 2330585 + F 100 -18.6 -4.54727 | opp_overlap 2330549 2330548 CATTGTCTGAAAGCG CAGGCGCCACTCCC GCAAGAG GGGAGCGGCGCCTG TTTTCATTTGCGCCG TERM 1978 2330622 - 2330641 + F 74 -2.1 -4.87786 | overlap 2330623 CGGATGTATTCAGGA TGGCGAA GTATTA TTCGTCG TTTTTATGCCATTGG TERM 1979 2331206 - 2331169 - g 100 -19.9 -3.16564 | gap 1, opp_overlap 2331180, overlap 2331198 2331201 CGCGCATCTGACCAA CCGGC-CGCTGCCGCCGC TCG GCGGCAACAGCACGCCGG AGGGCGTGATTCACG TERM 1980 2331310 - 2331280 - g 72 -13.2 -3.16881 | opp_overlap 2331289 2331291, overlap 2331283 GATCGAGCTGACCAA CTACGGCACGACGG AAG CGGTCGTGCCGCTG TCCATCTCCTTCGCG TERM 1981 2331307 - 2331283 - g 78 -15.7 -2.78547 | opp_overlap 2331289 2331291, overlap 2331280 CGAGCTGACCAACTA CGGCACGACGG AAG CGGTCGTGCCG CTGTCCATCTCCTTC TERM 1982 2332073 - 2332096 + G 83 -14.6 -3.25015 | gap 1, overlap 2332074 TTCGCGCTGTATTAC G-GCGGGGTCG ACA CGACCCCGCTC TTCATCGTGCTTGCG TERM 1983 2332074 - 2332094 + G 93 -18.3 -3.18737 | overlap 2332073 TCGCGCTGTATTACG GCGGGGTCG ACA CGACCCCGC TCTTCATCGTGCTTG TERM 1984 2333017 - 2333062 + G 72 -13.3 -3.06796 | gap 1 GGGCATCGACTGGAT CGAGATCGGCGATCTGCGCGTC GGC GACGCGTCGGT-GTCGATCACG TTCCGTCGCGTGGCG Bphy_5206 2330855 - 2333134 + | Amylo-alpha-16-glucosidase TERM 1985 2333220 - 2333242 + G 83 -9.8 -4.3739 | opp_overlap 2333219 2333220 TACGTCGCGTACAAG GGCACGCTGA GAC TGGGCGTGCC TTTTCTCGACGGCTA Bphy_5207 2333187 - 2333930 + | hypothetical protein TERM 1986 2334958 - 2334903 - g 100 -19.6 -3.53012 | gap 1, overlap 2334909 CGTGGCGGCGCGAAA GCCAAACCCGCTGCGGCGCCCAGGCGC AAG GCGCCCGAGC-CCGTCGCCGGTATGGC AGAGGCGACGCGAGC TERM 1987 2334952 - 2334909 - g 88 -14.4 -3.84451 | gap 1, overlap 2334903 GGCGCGAAAGCCAAA CCCGCTGCGGCGCCCAGGCGC AAG GCGCCCGAGC-CCGTCGCCGG TATGGCAGAGGCGAC Bphy_5208 2334120 - 2335043 + | Ku protein Bphy_5209 2335040 - 2335879 + | TPR repeat-containing protein Bphy_5210 2336069 - 2336413 + | hypothetical protein Bphy_5211 2336575 - 2336946 + | hypothetical protein Bphy_5212 2337236 - 2337604 + | hypothetical protein Bphy_5213 2337859 - 2338230 + | hypothetical protein Bphy_5214 2338590 - 2338354 - | hypothetical protein TERM 1988 2338651 - 2338618 - H 76 -4.4 -4.72272 | gap 1, opp_overlap 2338622, overlap 2338619 CTGCGTTATGAAAAA GCGTCGGGCG-GTTC GCCTG GACCACGCCCGTCGT TGGACGGGAACGTTG Bphy_5215 2338988 - 2339524 + | metal dependent phosphohydrolase Bphy_5216 2339733 - 2340845 + | metallophosphoesterase TERM 1989 2341329 - 2341295 - g 75 -12.1 -3.54424 | gap 1, opp_overlap 2341294 2341307 GGCGAGGTCCGCAAA GCGG-GCGAGCACGCG TCGA CGCATGTCCGCGCCGC GCTTTCGCAACTCAC TERM 1990 2341837 - 2341780 - g 84 -15.3 -3.31144 | gap 1 GCGCGACCTCGAGAA GGCCGATGCGGGCGCGGCGCAGGCGGGC GCT GCCCACGAGCGC-GCGCTCGCGTCCGAC GCCGCCGCGCACAAG Bphy_5217 2340842 - 2343478 + | putative GTP-binding protein TERM 1991 2343718 - 2343756 + G 73 -13.9 -2.87211 | GTCGATGCGCAAGGT CGC-CGAGCGCGCGCAGGT GCA ACCCGCGT-CGCTCGTGCG TCTGTCGCAGCAACT TERM 1992 2343957 - 2344008 + G 72 -7 -4.21908 | gap 1, opp_overlap 2343923 2343946, overlap 2344003 ACAACACGCGTGTCA CCGTCGAAGCGGCCAAGCTGCTGCG GCG CGC-GCCGCATGTGCACGTCGGCGG TTTTCGCTCGTGCTA Bphy_5218 2343584 - 2344444 + | RpiR family transcriptional regulator TERM 1993 2344774 - 2344808 + G 100 -9.2 -4.98522 | gap 1, overlap 2344775 GGCCGAACTCGACGG CAT-GGCCGCGGGCC TCGGCT GGCCCGCCGCCGACG TTTTTCTCTGGAATT TERM 1994 2344963 - 2344978 + G 71 -11.8 -3.19921 | opp_overlap 2344940 CGTCGATGTGCGGCC GCCGGG CAAA CCCGGC TTCATCAGCTTCTAT TERM 1995 2345531 - 2345491 - g 70 -5.9 -4.30576 | opp_overlap 2345521 TCCCGACGACGAAAA CACCCTCGCGACGGCGCTG TTC CAGATCCGCGACGACGGCG TCGCGCTGCAGGTTC Bphy_5219 2344559 - 2345599 + | peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase Bphy_5220 2345635 - 2346972 + | aminotransferase class-III Bphy_5221 2347002 - 2347556 + | carboxymuconolactone decarboxylase TERM 1996 2347617 - 2347588 - T 100 -14.3 -3.79874 | gap 1, opp_overlap 2347588 GCGCACACAAGACAA GGCCCCG-GGACTC GAT GAGTCGGCGGGGCC TTCGTTCATCTGACG TERM 1997 2347588 - 2347617 + T 87 -14.3 -3.43071 | gap 1, opp_overlap 2347588 GCGCACACAAGACAA GGCCCCG-GGACTC GAT GAGTCGGCGGGGCC TTCGTTCATCTGACG Bphy_5222 2347959 - 2347663 - | hypothetical protein TERM 1998 2347798 - 2347825 + g 75 -3.4 -4.77165 | gap 1, overlap 2347778 2347780 CGTGGCCTTCGGGTA CGTCACG-TCG TTCTGGT CGAGCGTGCCG TTTTGTTGTGCGGCG Bphy_5223 2348289 - 2348714 + | OsmC family protein TERM 1999 2349103 - 2349078 - g 76 -9.7 -4.11216 | gap 1 CGCGGACCTCGAAAA CGGCTT-CGGCG ACG CGCCGGAAGACG CGGCCGAGACAATCC Bphy_5224 2348818 - 2349654 + | hypothetical protein Bphy_5225 2350928 - 2349735 - | major facilitator transporter TERM 2000 2350506 - 2350519 + g 80 -5.2 -4.77165 | overlap 2350479 2350476 GCCCGTTGCGAGCAG GCCG AGCGCG CGGC TTTTCTTGTCGGCAG TERM 2001 2351039 - 2351022 - R 100 -9.8 -5.06414 | GCCGCTCAAGAAAAA GCCCGC ACGGAG GCGGGC AAGAATCCATATCAG TERM 2002 2351334 - 2351364 + r 87 -8.2 -4.72986 | opp_overlap 2351316, overlap 2351336 CGCTGGCGGGCGATG CCCGCCTTCACG CACCGAT CGTGACGGCGCG TTTTTGCTCGAAGTC Bphy_5226 2352327 - 2351341 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 2003 2351582 - 2351561 - G 71 -9.4 -3.73402 | gap 1, overlap 2351549 ACAGGCGCGAGCAAA CG-CGCCGC CTCCT GCGGCGACG TGCGGACCCACGCCC TERM 2004 2351826 - 2351856 + g 71 -7.4 -4.07568 | opp_overlap 2351829, overlap 2351829 2351854 CGGGGGGGAGGTAGT GAATGCGTGTCGCC GAC GCCGGCACGCCTGC TTTTGCCAGGGCGGC TERM 2005 2351942 - 2351958 + g 72 -11.5 -3.53811 | AGATCGCCGACCGAG CGCGGCG CGC CGTCGCG TTTCACGAGGATCGC Bphy_5227 2352603 - 2353604 + | substrate-binding region of ABC-type glycine betaine transport system Bphy_5228 2354186 - 2353812 - | hypothetical protein Bphy_5229 2355096 - 2354140 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein Bphy_5230 2355286 - 2355924 + | LysR family transcriptional regulator Bphy_5231 2355928 - 2356197 + | LysR family transcriptional regulator Bphy_5232 2357813 - 2356206 - | rhodanese domain-containing protein TERM 2006 2356642 - 2356661 + g 71 -10 -3.61398 | gap 1, opp_overlap 2356642 GTGCCGCTCGAAGGA CTCGCGAGC AGG GC-CGCGAG TTCTTCGGCGCCCAG TERM 2007 2356859 - 2356832 - G 71 -13.4 -3.01712 | gap 1 CGTCGTCGTCGAATA GCACCACGCGCGC GCC GCGCACG-GGCGC GAACATATCCGTCTC Bphy_5233 2358406 - 2357810 - | cysteine dioxygenase type I Bphy_5234 2359221 - 2358406 - | class II aldolase/adducin family protein TERM 2008 2358658 - 2358633 - G 71 -7.5 -4.07568 | opp_overlap 2358625 2358634, overlap 2358634 GGCCTGCCGTCAAAA TGCCGTGATTC TTCA GGATCACGGCT TTGCGCGAGCCTAGC TERM 2009 2358634 - 2358657 + g 78 -13.2 -3.53444 | opp_overlap 2358633 2358634, overlap 2358625 GCCTGCCGTCAAAAT GCCGTGATTC TTCA GGATCACGGC TTTGCGCGAGCCTAG Bphy_5235 2360309 - 2359233 - | alkanesulfonate monooxygenase TERM 2010 2359415 - 2359429 + g 70 -2.1 -4.64861 | gap 1 CAAGTGCAGTCGAGT TCGAGC GTCC GC-CGA TTTCTTTTGCGACGG TERM 2011 2359465 - 2359513 + g 80 -14.5 -3.06696 | gap 2, opp_overlap 2359456 CAGAGACGCTCATCC GCGCGGACGCCGTCGCCGGATGC CGCGA GCAGCCGGCG-CG-CGCCCTCGC TCTGTTGCGGACCGC Bphy_5236 2360588 - 2360905 + | hypothetical protein Bphy_5237 2362594 - 2360930 - | alpha amylase catalytic region TERM 2012 2361209 - 2361168 - G 70 -10.9 -3.35679 | gap 1, overlap 2361172 TTGCGCCAGTGATAA CACAGCGCCA-GCACATCGC TTC GCGATGTGCGCAGCACTTCG AAATCCCCCCAGCTG TERM 2013 2361205 - 2361172 - G 71 -12.5 -3.18945 | gap 1, overlap 2361168 GCCAGTGATAACACA GCGCCA-GCACATCGC TTC GCGATGTGCGCAGCAC TTCGAAATCCCCCCA TERM 2014 2364052 - 2364063 + G 70 -5.8 -4.26076 | ATGAACGGCATTACC GCGA GCGA TCGC TTTTCGTCGCACTGA Bphy_5238 2362644 - 2364218 + | alpha amylase catalytic region Bphy_5239 2366894 - 2364285 - | PAS/PAC sensor hybrid histidine kinase Bphy_5240 2367250 - 2368356 + | NADPH-dependent FMN reductase Bphy_5242 2368723 - 2369688 + | alcohol dehydrogenase Bphy_5243 2370698 - 2369673 - | NAD-dependent epimerase/dehydratase Bphy_5244 2371677 - 2370721 - | glycosyl transferase group 1 Bphy_5245 2372806 - 2371667 - | glycosyl transferase family protein Bphy_5246 2373849 - 2372803 - | glycosyl transferase family protein TERM 2015 2373610 - 2373580 - G 89 -18.2 -2.88544 | GCTGACGGGCACATA GCGCACGGCCGGGC CGC GCCCGGCGACGCGC AGCGCCAACTGCTCG Bphy_5247 2375621 - 2373846 - | carbamoyltransferase Bphy_5248 2376820 - 2375618 - | glycosyl transferase family protein TERM 2016 2376181 - 2376213 + g 71 -7.6 -4.15006 | gap 1, overlap 2376191 ACGGCACGGCGGGAT CGATCCCGCGTCGCG CGAG CGCGGC-CGCGAGCG TTTTGCGGTCGATGT TERM 2017 2376759 - 2376798 + g 93 -17.9 -3.53091 | gap 2, overlap 2376760 GGCGCGAGCGGCGCG GCG-GCCGC-GACGGCCGC ATGC GCGGCCGTCGGCGGCGCGA TTTGCGCGAGACGCT TERM 2018 2376760 - 2376797 + g 100 -21.4 -2.71712 | gap 2, overlap 2376759 GCGCGAGCGGCGCGG CG-GCCGC-GACGGCCGC ATGC GCGGCCGTCGGCGGCGCG ATTTGCGCGAGACGC Bphy_5249 2377443 - 2376817 - | HAD superfamily hydrolase Bphy_5250 2378768 - 2377476 - | glycosyl transferase group 1 TERM 2019 2379003 - 2378987 - H 70 -3.6 -4.60041 | overlap 2378974 AGGCACCGGTAAAAA CGCTGC GCGGT GAAGCG GCCCGTTGCAGGCGC Bphy_5251 2379162 - 2381843 + | response regulator receiver protein Bphy_5252 2382823 - 2381840 - | glycosyl transferase family protein TERM 2020 2382740 - 2382752 + g 71 -10.5 -3.60525 | CAGTGTCTCGATGAG CCGCG TCG CGCGG TTGTGTGTCAGTACG Bphy_5253 2383053 - 2382820 - | hypothetical protein Bphy_5254 2383983 - 2383372 - | putative ParB-like nuclease Bphy_5255 2384210 - 2385460 + | phosphatidylserine decarboxylase-related Bphy_5256 2385696 - 2386925 + | natural resistance-associated macrophage protein TERM 2021 2387513 - 2387526 + G 75 -4.5 -4.6038 | overlap 2387502 TCTCGGTACGGTGTC CCTGT TGCT GCAGG TTTTCGTTTCCTATG Bphy_5257 2387082 - 2388380 + | natural resistance-associated macrophage protein Bphy_5258 2389085 - 2388501 - | hypothetical protein TERM 2022 2390578 - 2390550 - R 100 -26.1 -2.87931 | overlap 2390513 2390511 2390510 TGCATCGCGCATAGA TGCGGAGCGCGGG TAG CCCGCGCTCCGCA TCCACCCTTCAGCTG Bphy_5261 2391015 - 2390608 - | heat shock protein Hsp20 Bphy_5262 2391468 - 2391028 - | heat shock protein Hsp20 Bphy_5263 2391672 - 2392103 + | hypothetical protein TERM 2023 2392628 - 2392643 + G 79 -2.4 -4.98531 | AAGAGTTGGGACATG GGGCGG AAAG CTGACC TTTTTAGTTTGCGAG Bphy_5264 2392625 - 2392870 + | hypothetical protein Bphy_5265 2394153 - 2393029 - | hypothetical protein TERM 2024 2394301 - 2394311 + H 100 -4.6 -5.75945 | overlap 2394279 ACGGCGCTGTGCTGC CCTG ACG CGGG TTTTTTTTGCCACAT TERM 2025 2394747 - 2394775 + G 71 -10.2 -3.58343 | gap 1, overlap 2394750 GCGGCCTCGTACGCC GTCGTGCGCGGGC AGCG GCCCGCGCG-GCC TTTCAAGGTGGTGCG Bphy_5266 2394465 - 2394839 + | hypothetical protein Bphy_5267 2394836 - 2395150 + | hypothetical protein Bphy_5268 2395686 - 2396069 + | hypothetical protein TERM 2026 2396087 - 2396066 - f 71 -13.1 -2.62642 | opp_overlap 2396065 2396066, overlap 2396065 AGCAGTATCCACAAG TTAACCGGC GAGC GCCGGTTAA ATTTCAACGCAACTG TERM 2027 2396066 - 2396087 + F 73 -13.1 -2.71924 | opp_overlap 2396066 2396065, overlap 2396065 AGCAGTATCCACAAG TTAACCGGC GAGC GCCGGTTAA ATTTCAACGCAACTG Bphy_5269 2396116 - 2396319 + | cold-shock DNA-binding domain-containing protein Bphy_5270 2396699 - 2396385 - | hypothetical protein Bphy_5271 2397494 - 2396925 - | hypothetical protein TERM 2028 2397665 - 2397652 - H 79 -5.2 -4.72272 | TGTCCGCATCAAAAA GCGC AAATCG GCGC ACGATCGAGACGGCC TERM 2029 2397673 - 2397703 + H 74 -2.5 -4.98255 | opp_overlap 2397691, overlap 2397674 2397676 ATCGGCGCACGATCG AG-ACGGCCCAGGGA AAA TCCC-GAGCCGTGCA TTTTTGTGATTAGCC TERM 2030 2398459 - 2398407 - g 71 -9.6 -3.73072 | gap 1, opp_overlap 2398424 AACTGCGTCAGGAAA CGTTCGCGCCGGAAGAG-GTGCGGC TCCA GCCGCGCTCGATTCCGGCGGGCTCG GTGCAATTGCGCAAG Bphy_5272 2398217 - 2398498 + | hypothetical protein TERM 2031 2398497 - 2398532 + T 81 -13.2 -3.5456 | overlap 2398500 GCATCGTTTCGTCGT GAACGCGACGACGCGC CCGA GCGCGCCCTCGCATTC TTCGTTCTTCGCCTT TERM 2032 2398500 - 2398529 + T 72 -9.1 -3.89957 | overlap 2398497 TCGTTTCGTCGTGAA CGCGACGACGCGC CCGA GCGCGCCCTCGCA TTCTTCGTTCTTCGC Bphy_5273 2399233 - 2398601 - | lysine exporter protein LysE/YggA Bphy_5274 2400661 - 2399510 - | epocide hydrolase domain-containing protein TERM 2033 2399646 - 2399626 - G 76 -14 -3.12327 | opp_overlap 2399642 2399645, overlap 2399624 GCGTCACATTGAATA CGCGCTCG ATCCA CGAGCGCG GCGGCCGGCTGATTT Bphy_5275 2401004 - 2400696 - | hypothetical protein Bphy_5276 2401185 - 2402669 + | peptidase dimerisation domain-containing protein Bphy_5277 2402752 - 2403858 + | malate/L-lactate dehydrogenase TERM 2034 2403874 - 2403886 + F 72 -9.1 -3.90291 | CGCCTGAACGCGCGC TGCCG CGT CGGCA TTTCATTCAGCGGAT TERM 2035 2404455 - 2404424 - g 90 -16 -3.75024 | opp_overlap 2404434 2404439, overlap 2404426 GCGTATTACGAAGAA GAGCGCAACATCAT GTGG ATGATGTTGCGCGC GCAACCGCGTCCGTG TERM 2036 2404453 - 2404426 - g 93 -17.2 -3.45742 | opp_overlap 2404434 2404439, overlap 2404424 GTATTACGAAGAAGA GCGCAACATCAT GTGG ATGATGTTGCGC GCGCAACCGCGTCCG Bphy_5278 2404343 - 2405221 + | enoyl-CoA hydratase/isomerase Bphy_5279 2407426 - 2405426 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 2037 2406644 - 2406619 - G 79 -2.4 -5.0065 | gap 1, opp_overlap 2406632 2406634, overlap 2406614 2406620 2406621 GATCGAGAAACAAAA TGCCGACGGCG TTGCC CGGCG-CGGCG CTGGCGATCGCCGCG TERM 2038 2406632 - 2406665 + g 80 -13.7 -3.4252 | opp_overlap 2406620 2406619 2406621 2406614, overlap 2406634 AATGCCGACGGCGTT GCCCGGCGCGGCGCT GGCG ATCGCCGCGCGGGTC TTGTCGTGGATCGCG TERM 2039 2406634 - 2406663 + g 83 -14.9 -3.28447 | opp_overlap 2406620 2406619 2406621 2406614, overlap 2406632 TGCCGACGGCGTTGC CCGGCGCGGCGCT GGCG ATCGCCGCGCGGG TCTTGTCGTGGATCG TERM 2040 2406874 - 2406838 - G 76 -6.3 -4.49756 | overlap 2406840 TGCGAAACAGGAAAA GCCGCTCGCCGTGCACA GTG CGCACGCGGCGCTCGAC TTCATACGCGACGCC Bphy_5280 2407742 - 2409466 + | Alpha,alpha-trehalase Bphy_5281 2414039 - 2409546 - | DEAD/DEAH box helicase domain-containing protein TERM 2041 2412817 - 2412772 - G 87 -17.5 -2.82987 | opp_overlap 2412777, overlap 2412763 GGAATATGCAGCAGA TCGAGTTCGCCGCGCTGCACG CAGT CGAGCAGCGCCGCGCATTCGA TCAGATCGTCGCGCG TERM 2042 2412777 - 2412812 + g 80 -14.6 -3.07113 | opp_overlap 2412763 2412772 ATGCAGCAGATCGAG TTCGCCGCGCTGCACG CAGT CGAGCAGCGCCGCGCA TTCGATCAGATCGTC TERM 2043 2413572 - 2413584 + g 79 -6.9 -4.56597 | opp_overlap 2413571 2413572 CGTCGTGACGAGAAT GTGCG GCG CGCGC TTTTTCAGCGCAGCG TERM 2044 2414160 - 2414186 + r 90 -16.6 -3.19653 | overlap 2414153 GTCTGCCACTGCTAC GCACCGCCGC ATTGCGC GCGGCGGTGC TTGATGCCGTTATGC Bphy_5284 2416165 - 2414795 - | putative transmembrane protein Bphy_5285 2417765 - 2416182 - | glycosyl transferase group 1 Bphy_5286 2418945 - 2417776 - | hypothetical protein Bphy_5287 2420410 - 2418932 - | hypothetical protein Bphy_5288 2421047 - 2420496 - | putative lipoprotein Bphy_5289 2424992 - 2421072 - | TPR repeat-containing protein TERM 2045 2421403 - 2421377 - GR 71 -12.3 -3.01712 | gap 1, opp_overlap 2421371 2421394 TGTTGTCCGGCAACA GCACGCGCAGGC GTTC GCCCG-GCGTGC CCGTCGCGTTGTACT TERM 2046 2423291 - 2423301 + gr 72 -8.2 -4.01419 | opp_overlap 2423265 CGTTGTTCGATGCGG GCGC CGC GCGC TTTGCTTCGTTCATC TERM 2047 2423486 - 2423498 + gr 71 -10.5 -3.53224 | GTTCCATCGCTTCGC GGCGC AAC GCGCC TTTGAAGCGCGACTG TERM 2048 2423649 - 2423669 + gr 82 -3.8 -5.06451 | overlap 2423646 2423649 CGCGTTGTCGTTGAG GCCGGGCG CCAGA CGCGCGAC TTTTTTCCAGTCGTC Bphy_5290 2427852 - 2424967 - | hypothetical protein TERM 2049 2425121 - 2425108 - GR 71 -4.5 -4.47271 | gap 1 CAAATCGAACGAAAA GC-CGC CGC GCGTGC GCACAAAATGGTCGA TERM 2050 2426296 - 2426261 - GR 71 -6.8 -4.18018 | gap 1, opp_overlap 2426251 GCGCGCGATGCAAAA CCGTCGCC-GTCGATAT GCG ACATCAGCAGGCGCCGG CCGTTTTCCGTCGTC Bphy_5291 2429520 - 2428186 - | sodium/hydrogen exchanger TERM 2051 2428833 - 2428816 - G 82 -6.9 -4.60041 | overlap 2428802 ACCGAGTGCGAAAAA GCCCTCG AGAC CGAGCGC CTGCGCATGCCGCGT Bphy_5292 2429971 - 2429543 - | hypothetical protein TERM 2052 2430034 - 2429989 - R 95 -14 -4.36914 | gap 1, opp_overlap 2429989 TGTTCCCCTATAAAA GCGCA-TCCGCCCGCCATGCG GACTT CGCCTGGCGAGCGGACTGGAC TGTCATCGTGGCTGC Bphy_5293 2430602 - 2430093 - | PRC-barrel domain-containing protein Bphy_5294 2431642 - 2430968 - | HAD family hydrolase Bphy_5295 2431956 - 2432228 + | hypothetical protein TERM 2053 2432255 - 2432275 + F 90 -16.1 -3.53012 | TGACGTGACGATTCC GTCCGGCGC CGA GCGCCGGGC TTTGCAACGAAGACG Bphy_5296 2432726 - 2433019 + | hypothetical protein Bphy_5297 2434270 - 2433035 - | DNA topoisomerase TERM 2054 2433170 - 2433200 + g 100 -19.7 -4.11216 | overlap 2433195 CGTCTTGCCGTCCTT GCGCGCGCCACGG ATTGC CCGTCGCGCGCGC TTTTCCGCCTGCGCG TERM 2055 2433862 - 2433887 + g 75 -11.9 -3.53444 | gap 1, overlap 2433864 TGCCCTTGCGTGCGA GA-TCGCGTGCG ACG CGCGCGCGAATC TTTGGCAGCGCCTGG TERM 2056 2433864 - 2433884 + g 74 -14.7 -2.60496 | overlap 2433862 CCCTTGCGTGCGAGA TCGCGTGCG ACG CGCGCGCGA ATCTTTGGCAGCGCC TERM 2057 2434810 - 2434779 - g 71 -10.8 -3.66018 | opp_overlap 2434761 CGATCAGGCGAAGAA GCCGATTGCCGTGA TCTG TCACGGCACCTGGC TGCCCGTGTCGGCGG Bphy_5298 2434462 - 2435013 + | PfpI family intracellular peptidase TERM 2058 2435020 - 2435005 - f 70 -4.6 -4.44667 | overlap 2435006 2435008 2435009 CTGTCGAAGAAGAAA GCAGCC TGAC GGCCAC GCGCGCTGCGCGCGA TERM 2059 2435367 - 2435344 - g 72 -6.6 -4.27316 | gap 1 CGTCGCAACGCAAAA GGGCCTCGGCA AGT CGCCG-GGCGC GGACTCCGCGCTGAT Bphy_5299 2435054 - 2435602 + | hypothetical protein Bphy_5300 2435599 - 2435955 + | hypothetical protein Bphy_5301 2436310 - 2436020 - | hypothetical protein TERM 2060 2436496 - 2436528 + H 75 -9.1 -4.09685 | gap 1, opp_overlap 2436493 2436496 2436513 2436515 2436516, overlap 2436497 CGCGGGAAGCAATGA CGCGCGTCGTTGGC AAAGAC GCCG-CGACGCGCC TTTTGGCGGGTCACG TERM 2061 2436497 - 2436527 + H 76 -12.6 -3.05597 | gap 1, opp_overlap 2436496 2436493 2436513 2436515 2436516, overlap 2436496 GCGGGAAGCAATGAC GCGCGTCGTTGGC AAAGAC GCCG-CGACGCGC CTTTTGGCGGGTCAC Bphy_5302 2436619 - 2437071 + | hypothetical protein TERM 2062 2437149 - 2437111 - T 93 -12.5 -4.4078 | gap 1, opp_overlap 2437119, overlap 2437119 CGGCGCGAAGCAAAA TAGAAGAAGGCCGCCCTC CTGC GAGGGCGGCCTT-TTCGC TTGCAGATGGAGGCT TERM 2063 2437119 - 2437142 + T 100 -19.6 -4.27584 | opp_overlap 2437111 2437119 AGCAAAATAGAAGAA GGCCGCCCTC CTGC GAGGGCGGCC TTTTCGCTTGCAGAT TERM 2064 2437142 - 2437119 - T 100 -19.6 -4.10559 | opp_overlap 2437119, overlap 2437111 AGCAAAATAGAAGAA GGCCGCCCTC CTGC GAGGGCGGCC TTTTCGCTTGCAGAT Bphy_5303 2437527 - 2437189 - | transport-associated Bphy_5304 2437960 - 2439432 + | RNA polymerase, sigma 54 subunit, RpoN TERM 2065 2439452 - 2439483 + T 95 -13.8 -4.18197 | gap 1, opp_overlap 2439453 2439459, overlap 2439453 2439459 CCGCCTTGCGTAATG ACAGAAATGGCCGCC GAT GGCGGCCATT-CTGC TTTTGACTGCGCGGT TERM 2066 2439453 - 2439482 + T 91 -17.3 -3.10597 | gap 1, opp_overlap 2439453 2439459, overlap 2439452 2439459 CGCCTTGCGTAATGA CAGAAATGGCCGCC GAT GGCGGCCATT-CTG CTTTTGACTGCGCGG TERM 2067 2439482 - 2439453 - T 89 -17.3 -2.70932 | gap 1, opp_overlap 2439453 2439452 2439459, overlap 2439459 CGCCTTGCGTAATGA CAGAAATGGCCGCC GAT GGCGGCCATT-CTG CTTTTGACTGCGCGG TERM 2068 2439477 - 2439459 - T 100 -16 -4.1347 | opp_overlap 2439459 2439453 2439452, overlap 2439453 GCGTAATGACAGAAA TGGCCGCC GAT GGCGGCCA TTCTGCTTTTGACTG TERM 2069 2439459 - 2439477 + T 100 -16 -3.6943 | opp_overlap 2439453 2439459, overlap 2439453 2439452 GCGTAATGACAGAAA TGGCCGCC GAT GGCGGCCA TTCTGCTTTTGACTG Bphy_5305 2440700 - 2439525 - | hypothetical protein TERM 2070 2440748 - 2440760 + H 72 -6.2 -4.29106 | opp_overlap 2440746 2440745 2440748, overlap 2440753 2440756 CGGTCATGAAAACGA GCGG CGCTC CCGC TTTATTCCTCTAAAA Bphy_5306 2440865 - 2441119 + | hypothetical protein Bphy_5307 2441359 - 2442951 + | EmrB/QacA family drug resistance transporter TERM 2071 2442952 - 2442972 + F 77 -10.3 -3.8647 | GCGCGCAACGCATGA CGCGGCCGG CGG CCCGCTGCG TTTGCTATGATGGCT TERM 2072 2443180 - 2443216 + G 70 -11.6 -3.34398 | gap 1, overlap 2443173 2443177 CCGCAAGTCTCGCGT GCGCTGCTCGTGCGTAT GCTG ATGCGCAAGGGC-GCGC TGTTTCGCACGGGGC TERM 2073 2444226 - 2444244 + G 79 -11.6 -3.9243 | CTGGGAGCCCGTGTT CGCGGCCG TGC CGGGCGCG TTCTTTCACCCCTTC Bphy_5308 2443021 - 2444736 + | VRR-NUC domain-containing protein TERM 2074 2445263 - 2445222 - g 80 -12.1 -3.71848 | opp_overlap 2445222, overlap 2445186 GCGGCGCACGAAGAA GCGCATCGCAACGCGCGCA ATGC CGCGCTCAACGCGTTGCGC TTTCCGTACGGCGAA TERM 2075 2445671 - 2445702 + G 85 -16.6 -2.9294 | gap 1 CACGCTCGACCGGGC GGCCGTGCGCGAAGC GGC GCT-CGCGCACGGCG TCTGTCCGTACTATC TERM 2076 2445914 - 2445900 - g 72 -12.8 -3.14931 | opp_overlap 2445870 2445910 GCGACGCTCGATCAA GCCGCG TTT CGCGGC GCGCGTCATAGCGCG Bphy_5309 2444733 - 2447003 + | DEAD_2 domain-containing protein Bphy_5310 2447143 - 2447631 + | hypothetical protein Bphy_5311 2450234 - 2447658 - | MscS mechanosensitive ion channel TERM 2077 2448485 - 2448495 + g 72 -8.2 -4.07568 | CGCTCTTTGTCCATT GCGC GAG GCGC TTTTCGACCGAGACG TERM 2078 2449276 - 2449251 - G 74 -2.6 -4.72272 | gap 2, overlap 2449252 2449253 CGGTTGCAGGAAAAA GCCCGCGGCGAT CACG ATCGC-ACGG-C AGATCACGTACAGGT TERM 2079 2449608 - 2449644 + g 80 -13.7 -3.33492 | ATCGGCCTGGACGGC GGCGCCTGAAGCCGC ATCGGCA GCCGCTTCACGCGCC TTGTCGCGTGCCTCG TERM 2080 2449747 - 2449708 - G 81 -16.6 -2.78384 | gap 1 GCGCGGCGCAGCAGA CGCCGC-GCCAGCCATT CGAGCGC AATGGCTGGCAGCAGCG TGCCGACCAGCACGA Bphy_5312 2450778 - 2450437 - | NIPSNAP family protein Bphy_5313 2452512 - 2450884 - | EmrB/QacA family drug resistance transporter TERM 2081 2452187 - 2452161 - G 71 -13 -3.01791 | ATGCCGCCGTGAACA GCACGATGCCCG CGA CGAACACCGTGC GCCGGCCGAGCTTGT TERM 2082 2452613 - 2452557 - R 84 -16.1 -2.57985 | gap 2, overlap 2452549 2452561 2452612 TGACAATGCAATGGA CACATTACG--CGCGCAGCCGTTCAGC GTGGT GCTGAACGGCTGCGTGTCCGCAATACG CTCAGGAAGCGTCCA TERM 2083 2452609 - 2452561 - R 84 -15.5 -2.95656 | gap 2, overlap 2452549 2452557 AATGCAATGGACACA TTACG--CGCGCAGCCGTTCAGC GTGGT GCTGAACGGCTGCGTGTCCGCAA TACGCTCAGGAAGCG TERM 2084 2452701 - 2452676 - R 79 -7.5 -4.68506 | gap 1, opp_overlap 2452700, overlap 2452680 AAGGAAGCGCAAAAA CTCAGTCGGCCG ATA CGGCCG-CTACG GCGTGCGCCCGGGGC Bphy_5314 2454185 - 2452677 - | sigma-54 dependent trancsriptional regulator TERM 2085 2453642 - 2453693 + g 75 -4.3 -4.65895 | gap 1, opp_overlap 2453672 2453673, overlap 2453673 GCGCGGTCAGTTCCT TGCCCGT-GCCCGATTCGCCCG CAATGAACA CGGGCGCATCCGTCTGCGCGCA TTTTTCGATCCGCCG Bphy_5315 2454704 - 2454330 - | hypothetical protein TERM 2086 2454514 - 2454544 + g 71 -12.5 -3.19463 | gap 1, opp_overlap 2454508 2454507, overlap 2454515 TTAAAACACCCTTCG TGCG-CGCCGCGTC GCGC GGCGCGGCGCCGCC TTACTGCCTGATCGC TERM 2087 2454515 - 2454543 + g 77 -16 -2.51464 | gap 1, opp_overlap 2454508 2454507, overlap 2454514 TAAAACACCCTTCGT GCG-CGCCGCGTC GCGC GGCGCGGCGCCGC CTTACTGCCTGATCG TERM 2088 2455083 - 2455041 - H 77 -10.7 -3.86346 | overlap 2455042 GGACGTCGGCAGAAA GTGG-CGCGAATGGTTCGTAC GAC GTACGG-CCATTCGCGACCAT GACGACTCCACCCGT TERM 2089 2455082 - 2455042 - H 82 -14.2 -2.91593 | overlap 2455041 GACGTCGGCAGAAAG TGG-CGCGAATGGTTCGTAC GAC GTACGG-CCATTCGCGACCA TGACGACTCCACCCG TERM 2090 2455117 - 2455134 + H 71 -10.5 -3.53012 | GCAAGCCCGACGTAC CCCGTCC AGCC GGGCGGG TTTGAAGGCCGACGG Bphy_5316 2455201 - 2455377 + | Flp/Fap pilin component Bphy_5317 2455420 - 2455596 + | Flp/Fap pilin component Bphy_5318 2455686 - 2456222 + | peptidase A24A prepilin type IV TERM 2091 2456728 - 2456677 - g 91 -17.3 -3.28712 | gap 3, overlap 2456692 CGCGCCGGCGGATAA CGGCG-GCGGCGCAAACCAGGCGGGC AAC GCCCGCCCG--CCGCGCCGCACGGCG GGCGCGTCCACCGCG TERM 2092 2456714 - 2456692 - g 75 -12.6 -3.53012 | overlap 2456677 CGGCGGCGGCGCAAA CCAGGCGGGC AAC GCCCGCCCGC CGCGCCGCACGGCGG TERM 2093 2456930 - 2456908 - g 80 -12.6 -3.73775 | GCGATGGGTAGCAAA GCGCGAAGCG CAA CGCCGCGCGC TGGCCGCCGCGCACC Bphy_5319 2456609 - 2457058 + | hypothetical protein TERM 2094 2457587 - 2457565 - g 79 -5.5 -4.68645 | CACCGAAAAGGAAAA CGCCAGC CGGGAAGGC GCCGGCG CGTCGGGACGCGATC Bphy_5320 2457122 - 2457970 + | Flp pilus assembly protein CpaB TERM 2095 2458143 - 2458096 - g 78 -14 -3.25823 | opp_overlap 2458101 2458141 2458141, overlap 2458100 TGGGCGCGACACGAA GCAAGCCGCGCGGCCGACGCGC ATCG GCACGCAAGCCGCACCGTTTGC GCACCGCGCGCATCT TERM 2096 2459750 - 2459701 - g 93 -17.7 -3.73783 | gap 1, overlap 2459702 CATGGAAGGCAAGAA GC-CGCAGGCGCCCGCCGAAGCCG TGC CGCCGTCGACGGGCGCCGCCGTGC CCGCCAATGCGATCC TERM 2097 2459747 - 2459702 - g 93 -18.9 -2.83788 | gap 1, overlap 2459701 ATGGAAGGCAAGAAG CCGCAGGCGCCCGCCGAAGCCG TGC CGCCGTCGACGGGCGCC-GCCG TGCCCGCCAATGCGA Bphy_5321 2458043 - 2460145 + | type II and III secretion system protein Bphy_5322 2460181 - 2460468 + | putative lipoprotein TERM 2098 2460519 - 2460490 - f 75 -12.1 -3.21912 | gap 1, overlap 2460492 CGGTGAACTGACGAA GACGCGCGCGCCGC CGC ACGACACGCGCG-C GCGATCGACCCAACC TERM 2099 2460518 - 2460492 - f 89 -15.8 -3.17319 | overlap 2460490 GTGAACTGACGAAGA CGCGCGCGCCGC CGC ACGACACGCGCG CGCGATCGACCCAAC TERM 2100 2461066 - 2461020 - g 82 -15.9 -3.15544 | CTTCATCGCGATGAA CGTCGC-GCACGCGCTCGCGACG CAG CGTGGCAAGCGCGTGCTGCT-CG TCGACGTGAACCAGC TERM 2101 2461737 - 2461701 - g 93 -13.7 -4.06866 | gap 1, opp_overlap 2461702 GCAGAAAGAGAAGAA GGGCGGCCTCG-CGCG CCTGTT CGCGTCGAAGCCGCGC GACGTGCCGCAGCTG Bphy_5323 2460565 - 2461767 + | response regulator receiver protein Bphy_5324 2461808 - 2463196 + | type II secretion system protein E Bphy_5325 2463215 - 2464195 + | type II secretion system protein TERM 2102 2464714 - 2464725 + G 79 -7.2 -4.52589 | overlap 2464667 GCGGCGCTCGCGATG GCCG CGCT CGGC TTTTATCTGCCGAAC TERM 2103 2465130 - 2465140 + G 70 -2.4 -4.63928 | opp_overlap 2465113 GGCGGCGAAGATCGC GCTG AAG CTGC TTTTTCCGCTGATGT Bphy_5326 2464279 - 2465250 + | type II secretion system protein TERM 2104 2465639 - 2465608 - g 79 -5.6 -4.64676 | CGATGGTCAAGAAAA CGGCGGTGCATGCG GCCG CGCAGTCTGCGCCG GCATCGCGCGGATCT Bphy_5327 2465595 - 2466851 + | patatin Bphy_5328 2467023 - 2467496 + | hypothetical protein TERM 2105 2467732 - 2467707 - g 73 -13.9 -2.82742 | overlap 2467704 AGGCTTCGACAAGGA CGCGGCACGCG AGAT CGTGCGCCGCG CGGCGTCGAACACGG Bphy_5329 2467537 - 2468454 + | procollagen-proline dioxygenase TERM 2106 2468528 - 2468548 + F 71 -10.4 -3.53224 | gap 1 GGCGAGTGCTGGATA CGGCCAGCG CATG CGC-GGCCG TTTCGAACACGCCTG Bphy_5330 2468613 - 2468822 + | hypothetical protein Bphy_5331 2468915 - 2469112 + | CsbD family protein TERM 2107 2469187 - 2469210 + F 95 -13.8 -3.9941 | opp_overlap 2469176, overlap 2469188 ACGAGCCCAGCTCGC AGGGCCGCGT TTCG ACGCGGCCCG TTTCGTTCTGCGAGC TERM 2108 2469188 - 2469209 + F 90 -17.3 -2.99325 | opp_overlap 2469176, overlap 2469187 CGAGCCCAGCTCGCA GGGCCGCGT TTCG ACGCGGCCC GTTTCGTTCTGCGAG Bphy_5332 2469318 - 2469560 + | hypothetical protein TERM 2109 2469861 - 2469803 - T 83 -14.4 -3.05384 | gap 1 TGTGGGTTCAGTTAA GCGGC-GCGTCGCCCGCACTGTGCAGC GTGCCG GCTGCGCCATGCGGCCGGCGCAGCAGC AGATCGACCTGACCT Bphy_5333 2470226 - 2469795 - | response regulator receiver protein Bphy_5334 2470266 - 2470589 + | hypothetical protein TERM 2110 2472818 - 2472868 + G 84 -8.3 -4.57569 | opp_overlap 2472864, overlap 2472815 2472811 2472819 2472820 CGTATCAGGTGACGG GGCGC-TCGTTGCTGCTCTTCGCGT TGC ACGCGAAGGGC-GAGACGAAGCGGA TTTTTCAGCGGCTGG TERM 2111 2472819 - 2472867 + G 73 -11.8 -3.3422 | opp_overlap 2472864, overlap 2472815 2472811 2472818 2472820 GTATCAGGTGACGGG GCGC-TCGTTGCTGCTCTTCGCGT TGC ACGCGAAGGGC-GAGACGAAGCGG ATTTTTCAGCGGCTG TERM 2112 2472820 - 2472866 + G 74 -15.3 -2.60211 | opp_overlap 2472864, overlap 2472815 2472811 2472819 2472818 TATCAGGTGACGGGG CGC-TCGTTGCTGCTCTTCGCGT TGC ACGCGAAGGGC-GAGACGAAGCG GATTTTTCAGCGGCT Bphy_5335 2470732 - 2472903 + | glycogen debranching enzyme GlgX TERM 2113 2472991 - 2472964 - T 80 -9.8 -4.15066 | opp_overlap 2472959 2472960 2472952 2472969, overlap 2472959 2472965 CAGGTAGAAAGCAAA GCGGACCGCTTC TGAT GAAGAGGTCCGT TCCCGTTTGCTGCTT TERM 2114 2472990 - 2472965 - T 79 -13.3 -3.08317 | opp_overlap 2472959 2472960 2472952 2472969, overlap 2472964 2472959 AGGTAGAAAGCAAAG CGGACCGCTTC TGAT GAAGAGGTCCG TTCCCGTTTGCTGCT Bphy_5336 2474715 - 2473081 - | glycogen/starch synthase, ADP-glucose type TERM 2115 2473374 - 2473394 + g 71 -10.4 -3.57144 | gap 1, opp_overlap 2473340 2473351, overlap 2473359 GCGCGCGTTGCAACG CGGCCG-CG ATGT CGTCGGCCG TTTCGCCATCGAACA TERM 2116 2475038 - 2475019 - R 90 -12.1 -4.19817 | opp_overlap 2475019 CGCACGGATGTAAAA CCCGCCG GAAAAA CGGCGGG TTTTACACAGCGCGC TERM 2117 2475019 - 2475038 + r 86 -12.1 -4.07568 | opp_overlap 2475019 CGCACGGATGTAAAA CCCGCCG GAAAAA CGGCGGG TTTTACACAGCGCGC Bphy_5337 2475728 - 2475141 - | putative lipoprotein Bphy_5338 2476407 - 2475964 - | response regulator receiver protein TERM 2118 2476958 - 2476932 - g 76 -9.4 -4.07687 | overlap 2476934 AGGTGCTGCGCAAAA TACATGACGCGA ATG CCGCGTCACGAA CGTCTCATTCACTGG TERM 2119 2476956 - 2476934 - g 77 -12 -3.63744 | overlap 2476932 GTGCTGCGCAAAATA CATGACGCGA ATG CCGCGTCACG AACGTCTCATTCACT TERM 2120 2477101 - 2477115 + G 71 -7.8 -4.08394 | ACGCGGTGTGTCCGC CGTGGC GCT GCCATG TTTTGAAAGCCATCT Bphy_5339 2476844 - 2478307 + | aspartate racemase Bphy_5340 2479608 - 2478412 - | N-isopropylammelide isopropylaminohydrolase TERM 2121 2478488 - 2478450 - G 74 -10.9 -3.63515 | gap 1, opp_overlap 2478440 2478472 CGTGACGCGCAACAA CGC-GTCCGTTCGCCACC ACCA GCTGGCGCACGGGCCGCG CCGCAACGGCATGCG TERM 2122 2478703 - 2478744 + g 70 -2.2 -4.65895 | opp_overlap 2478735 GCCAAACGGATTCCA GGTGTCGCGGATG-CCGTCG TTGC CGCCGAACAGC-GTGACACC TTTTTCGATGCACGC TERM 2123 2478965 - 2478950 - G 77 -11.8 -3.66356 | opp_overlap 2478931 AGCTTCAATGTGAAA CCGCCG ATTT CGGCGG GCTCGTGCAGATGAA TERM 2124 2479484 - 2479451 - G 78 -8.1 -4.36914 | gap 1, opp_overlap 2479471, overlap 2479452 TGGCCTTCTACAAAA CCGGGCAGCAGCAACG CAC CGTTGCCG-TGCTCGC GCGCCACCTCATGTT Bphy_5341 2480240 - 2479605 - | hypothetical protein TERM 2125 2480252 - 2480276 + r 74 -7.8 -4.10161 | gap 1, overlap 2480253 TCATATGCCCTTTGC AGCAGCGCGAC CTGT GTCGCGC-GCA TTTTCGCAGGTAGTG TERM 2126 2480353 - 2480378 + r 88 -16.2 -3.14564 | opp_overlap 2480353 CACCACGTAAAAAAA CGGCGAGTGC GCAGTG GCACTCGCCG TTGATGAGCCGCTGC TERM 2127 2480378 - 2480353 - R 100 -16.2 -5.48825 | opp_overlap 2480353 CACCACGTAAAAAAA CGGCGAGTGC GCAGTG GCACTCGCCG TTGATGAGCCGCTGC Bphy_5342 2481368 - 2480400 - | hypothetical protein TERM 2128 2481637 - 2481620 - R 72 -4.7 -4.60924 | opp_overlap 2481621, overlap 2481610 2481621 CAAAGCGGCGAAAAA CCGGGAC ATGT GCCCCGT TATGCAGCGGGCGCG Bphy_5343 2482722 - 2481637 - | LuxR family transcriptional regulator Bphy_5344 2484884 - 2482941 - | hypothetical protein TERM 2129 2483818 - 2483804 - G 78 -7.8 -4.38712 | GCCAGCTCCAGAAAA TCGCCG CGA CGACGA CAGCGAGGGGCGACA TERM 2130 2486148 - 2486162 + G 79 -11.4 -3.86346 | GCGGTGCTGCCCGAG CGGCTC GTC GAGCCG TTTGTCGCCGCATGG Bphy_5345 2485065 - 2486585 + | transcriptional regulator TERM 2131 2486618 - 2486581 - T 74 -6.9 -4.37886 | gap 1, opp_overlap 2486606 CCATGCTCTACAAAA CGTGAGGTCCGCCGCG CGTGGAT CACGGCGG-CAGCACG AGCGGCCCGCAGTTC Bphy_5346 2487118 - 2486603 - | cupin 2 domain-containing protein Bphy_5347 2487867 - 2487115 - | NAD-dependent epimerase/dehydratase TERM 2132 2487558 - 2487518 - G 77 -10.9 -3.72576 | opp_overlap 2487502 2487541 2487546 CTTTGCGCGACGAAA CGCTTGCTGCCTGCCGCCA GCG CGGCGGCGAGCAGATTGCG CGTGCCTTCGTCGCG TERM 2133 2488042 - 2487995 - R 100 -11.2 -5.38054 | CCGTACAAAGAAAAA CGGCGATCTGGAACGGGCGCGC GTGC GCATGCAGATCCCAAATCGCCG TGCAGGTGGAAGCGC Bphy_5348 2489227 - 2488061 - | porin TERM 2134 2489591 - 2489608 + r 100 -12.7 -5.75945 | opp_overlap 2489591 ACAACATGCTTTAAA CGCGGCT TTCG AGCCGCG TTTTTTTTCGCCGGT TERM 2135 2489608 - 2489591 - R 81 -12.7 -3.57883 | opp_overlap 2489591 ACAACATGCTTTAAA CGCGGCT TTCG AGCCGCG TTTTTTTTCGCCGGT Bphy_5349 2490417 - 2489638 - | short-chain dehydrogenase/reductase SDR Bphy_5350 2491445 - 2490423 - | oxidoreductase FAD-binding subunit TERM 2136 2490836 - 2490780 - G 83 -5.6 -4.88736 | gap 1, overlap 2490810 2490812 2490815 GAGCATCGACAAAAA CGGCGCAATGCCCGTTCCGCCCGCG AGAAACAG CACGGGCCGCGC-GGCGTCGCGCAG ATAGAACGCGCCGTA Bphy_5351 2491994 - 2491491 - | benzoate 1,2-dioxygenase, small subunit Bphy_5352 2493358 - 2491991 - | benzoate 1,2-dioxygenase, large subunit TERM 2137 2492812 - 2492839 + g 77 -12 -3.60475 | gap 1, overlap 2492815 TGTCGATGATGCGCG CGGCCTCGCCGAG ATA CTCGGCGA-GCGG TTTCACATCGGGATT TERM 2138 2494072 - 2494092 + G 84 -8.3 -4.56597 | TGTCGCTGCACGATC TGATCAACG AGA CGCTGATCA TTTTTCCGAAGGCGC Bphy_5353 2493516 - 2494439 + | LysR family transcriptional regulator Bphy_5354 2495881 - 2494487 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2139 2496364 - 2496387 + G 87 -7.4 -4.72272 | gap 1, opp_overlap 2496365, overlap 2496365 GGCGGTACGGGGGAA ACGGCCG-ACA TCC TGTGCGGCCGG TTTTTGCTCGGCGCG TERM 2140 2496386 - 2496365 - g 72 -10.9 -3.55444 | gap 1, opp_overlap 2496364 2496365 GCGGTACGGGGGAAA CGGCCG-ACA TCC TGTGCGGCCG GTTTTTGCTCGGCGC TERM 2141 2496365 - 2496386 + G 72 -10.9 -3.43042 | gap 1, opp_overlap 2496365, overlap 2496364 GCGGTACGGGGGAAA CGGCCG-ACA TCC TGTGCGGCCG GTTTTTGCTCGGCGC TERM 2142 2496663 - 2496700 + G 71 -13.9 -2.71712 | opp_overlap 2496655, overlap 2496662 2496682 GAGCGAAGCGGCACA GCCGCCGCACGGCCTGC TGGC GCTGGCCGGGCGTCCGC GTTTGCAGGCGGCCG Bphy_5355 2496046 - 2497068 + | AraC family transcriptional regulator Bphy_5356 2497415 - 2497693 + | glutaredoxin 3 Bphy_5357 2498652 - 2497759 - | peptidase M23B TERM 2143 2498289 - 2498333 + g 73 -14.2 -2.87931 | gap 2, opp_overlap 2498276 2498274 CATCCTGTTCGTCGG CCGCGTCGGGCGGCG-GC-GCG ACG CGCAGCACGCTGCCCGGCTCGA TGTGTCCGGGGTCGG TERM 2144 2498873 - 2498921 + r 78 -6.5 -4.61231 | gap 1, opp_overlap 2498838, overlap 2498901 GCGACACGTGTCGCC GCGCAGTCGCATCGCGCGCAGC GACCAG GCCGCCCGCTAGG-GACGGCGC TTTTTCCACGTGTAA Bphy_5358 2499148 - 2498909 - | hypothetical protein Bphy_5359 2500881 - 2499181 - | acid phosphatase TERM 2145 2501086 - 2501054 - R 79 -13.3 -3.05384 | CTTCGGGGCAGGCAA GCGGGCGGGCGCC TGCCGTC GGCGCCCGATCGC CATGAACCGGGCGCG Bphy_5360 2501828 - 2501124 - | hypothetical protein Bphy_5361 2502095 - 2501952 - | hypothetical protein Bphy_5362 2502343 - 2502080 - | hypothetical protein Bphy_5363 2502562 - 2502990 + | TOBE domain-containing protein Bphy_5364 2503997 - 2503140 - | hypothetical protein TERM 2146 2503673 - 2503623 - G 71 -10.3 -3.6682 | gap 1 GCCGATCCACTGAAA CAGGCGCAGACGGTC-GCCGCGCG CCAG CGCGTAGCCGATCATCGTCGCCTG TACGGCGCCGAATAG TERM 2147 2503774 - 2503737 - G 74 -5.4 -4.57516 | gap 1, overlap 2503731 2503738 2503765 ATACGCAAACGAAAA CGCCG-CGGCGTACGCG AACAG CGCGAAAGCCGACAGCC AGTTGCCGCCGACGC Bphy_5365 2505470 - 2504076 - | FAD linked oxidase domain-containing protein TERM 2148 2505539 - 2505497 - R 100 -15.1 -4.09117 | gap 1 GGTACGGACAAACAA CGTCCGAACC-CCTCGATCA TGTC TGATCAAAGTAGTTCGGACG ACCTGGCTTTCATCT Bphy_5366 2505795 - 2505523 - | hypothetical protein TERM 2149 2505801 - 2505784 - G 72 -7 -4.3208 | opp_overlap 2505784, overlap 2505763 2505762 2505778 TTCGACAATCGAAAA GCCTGT GCGCAT ACAGGC TCGTTCGTGAAGGCG TERM 2150 2505871 - 2505882 + H 74 -2.2 -4.90381 | overlap 2505868 2505869 AAGCCCATAGCGGGA GCAG CACC TTGC TTTTCTTCTGTTACG TERM 2151 2506863 - 2506880 + G 82 -4 -5.00616 | opp_overlap 2506847 2506846 TGCGCGAAGAACTTC GCGCCG AGCTCA CGACGC TTTTTTCCGACGGCA Bphy_5367 2506349 - 2507461 + | ABC transporter related Bphy_5368 2507448 - 2508560 + | ABC transporter related Bphy_5369 2508557 - 2509450 + | binding-protein-dependent transport systems inner membrane component Bphy_5370 2509443 - 2510255 + | binding-protein-dependent transport systems inner membrane component Bphy_5371 2510255 - 2510536 + | putative transmembrane protein TERM 2152 2512145 - 2512135 - g 100 -8.2 -5.00616 | overlap 2512136 TTGCCGGCGAAAAAA CGCC ACA GGCG GCAATGGACAACCTC Bphy_5372 2510625 - 2512367 + | extracellular solute-binding protein TERM 2153 2512423 - 2512402 - f 100 -17.3 -4.11484 | opp_overlap 2512402 TGGAAGGCCGGAAAA GGCGGCGTC GAAA GACGCCGCC TTTTTTATTGGATGT TERM 2154 2512402 - 2512423 + F 100 -17.3 -5.49234 | opp_overlap 2512402 TGGAAGGCCGGAAAA GGCGGCGTC GAAA GACGCCGCC TTTTTTATTGGATGT TERM 2155 2514368 - 2514346 - g 93 -17 -3.87815 | GTTGACGTTGACAAA CGGGCAGCAG AAC CTGCCGCCCG AACACAACAAGTCGT Bphy_5373 2512709 - 2514946 + | TonB-dependent siderophore receptor TERM 2156 2514970 - 2515022 + F 78 -14.2 -2.52676 | gap 1, opp_overlap 2514994 2515010 AGCGATAGCCACCGA C-ATGCCGCATGCTTCCCGCACGAA GCGA TTCATGCAGGAAGCGCGCGGCGTAG TCCGTTACGCAGGTA TERM 2157 2515534 - 2515564 + G 91 -14.6 -3.8211 | CCTGCATCAGGTGCG GCCCGTCACGCGCG GCG CGCGCGTAGCGAGC TTCTTCTGGGTGCAA Bphy_5374 2515046 - 2515729 + | 2OG-Fe(II) oxygenase TERM 2158 2515761 - 2515730 - T 89 -16.6 -3.1355 | overlap 2515736 TGGAGCGATACTTAA GCAAAACGCCCGCA CCAA TGCGGGCGTTCAGC AGAGGCCATCAGCCG TERM 2159 2515755 - 2515736 - T 100 -15 -4.44548 | overlap 2515730 GATACTTAAGCAAAA CGCCCGCA CCAA TGCGGGCG TTCAGCAGAGGCCAT Bphy_5375 2517495 - 2515786 - | L-lactate transport TERM 2160 2517161 - 2517131 - G 83 -6 -4.8622 | overlap 2517116 2517132 GCGCCGAACGAAAAA CCGATCAGCAGCAG CTG CAGGCGCTGATCGT CCGTCAGCGCGAGCA TERM 2161 2517313 - 2517287 - G 79 -11.5 -3.9373 | gap 1, overlap 2517281 TAGCCAAAACCGAAA CCCGCCGC-GGC GAAG GCCTGCGGCGCG GGCATGCCGTAGGCG Bphy_5376 2519058 - 2517613 - | iron-sulfur cluster binding protein Bphy_5377 2519762 - 2519055 - | hypothetical protein Bphy_5378 2520553 - 2519759 - | hypothetical protein TERM 2162 2520672 - 2520660 - H 72 -6.3 -4.27117 | GCGCGACAATACAAA TTGGT TGG ACCAA TGAGGGAGCGAGACA Bphy_5379 2520687 - 2521391 + | GntR domain-containing protein Bphy_5380 2523023 - 2521449 - | methyl-accepting chemotaxis sensory transducer TERM 2163 2522033 - 2522049 + g 76 -9.3 -4.10657 | overlap 2522017 CGCTTTCGGCGAGTT CGCTCGC GGT GCGCGCG TTTTCGGCCGTCTGC Bphy_5381 2524117 - 2523194 - | LysR family transcriptional regulator Bphy_5382 2524269 - 2525012 + | short-chain dehydrogenase/reductase SDR Bphy_5383 2525184 - 2526269 + | Mg2 transporter protein CorA family protein Bphy_5384 2526437 - 2526745 + | ethyl tert-butyl ether degradation EthD Bphy_5385 2526955 - 2528703 + | dihydroxy-acid dehydratase Bphy_5386 2528731 - 2529465 + | dimethylmenaquinone methyltransferase Bphy_5387 2529551 - 2530876 + | major facilitator transporter TERM 2164 2531697 - 2531729 + G 72 -12.8 -3.14132 | opp_overlap 2531680 GTCGCGCCGCCCAGT TCGCTGGCGACG-GGC AAG GCCGCGTTGCC-GCGA TTGCTGGACAGCGCG Bphy_5388 2530959 - 2532026 + | LacI family transcription regulator Bphy_5389 2533180 - 2532062 - | response regulator receiver modulated diguanylate cyclase Bphy_5390 2534305 - 2533289 - | response regulator receiver modulated CheB methylesterase TERM 2165 2533820 - 2533878 + g 86 -15.1 -3.53444 | overlap 2533821 CGCGGCCGGACCGCC C-GCCGACGCGCCGATCGCGACCAGCCGC CGG GCGTCGGGCTGC-AGCGGCGCGGCGGCTG TTTGCCGGGGCGTGG TERM 2166 2533821 - 2533876 + g 93 -18.8 -3.34517 | gap 1, overlap 2533820 GCGGCCGGACCGCCC GCCGACGCGCCGATCGCGACCAGCCGC CGG GCGTCGGGCTGC-AGCGGCGCGGCGGC TGTTTGCCGGGGCGT Bphy_5391 2536584 - 2534302 - | CheA signal transduction histidine kinase TERM 2167 2534948 - 2535006 + g 71 -10.1 -3.59979 | gap 2 ACGGCCACCGATTCG CGCGCCGCGCCCGCCGCCTGCGCACCGAG CAG CT-GGTGCGC-GGTGACGAGTCCGACGGG TTTGCCGTCGAACGC Bphy_5392 2537282 - 2536581 - | CheW protein Bphy_5393 2538681 - 2537263 - | TPR repeat-containing CheR-type MCP methyltransferase TERM 2168 2537329 - 2537370 + g 70 -14.4 -2.57132 | gap 1, overlap 2537328 CGACGCGTCCGTCGA CTG-CGCGGCGCGCGCGGC CGAGC GTTGCGCGCGCTGCACCAG GTTCTGCGCGCCCGC TERM 2169 2538388 - 2538347 - G 100 -26.7 -2.79302 | gap 1, opp_overlap 2538351, overlap 2538327 2538323 AGCACGCGCAGCAGA CGCGCCGGCTCGCGCACGAG CCG CTCGTTCGCGAGCCG-CGCG AGCGCGACATACGCT Bphy_5394 2539148 - 2538678 - | CheW protein Bphy_5395 2540867 - 2539191 - | methyl-accepting chemotaxis sensory transducer TERM 2170 2540423 - 2540380 - G 74 -10.8 -3.73775 | gap 1, opp_overlap 2540381 2540396 GCGAGCTTGAGGAAA GCGGCCTGCGCCTGCGCCTTC GAA GCGGGCGCA-GCGCGGAGCGC GTCGTTCAGCTGCGG TERM 2171 2541007 - 2540990 - R 70 -4 -4.63527 | overlap 2540992 TCATTATCGCAAAAA GGCTGG CAAACC CCCGCC AGATCGCCCGTTTGC Bphy_5396 2542035 - 2541121 - | LysR family transcriptional regulator Bphy_5397 2542146 - 2542709 + | hypothetical protein Bphy_5398 2542752 - 2543465 + | short-chain dehydrogenase/reductase SDR Bphy_5399 2543882 - 2543496 - | hypothetical protein Bphy_5400 2544297 - 2543989 - | hypothetical protein Bphy_5401 2544508 - 2545503 + | hypothetical protein TERM 2172 2545618 - 2545653 + T 70 -3.8 -4.56775 | overlap 2545581 2545619 TCGCAACACGCCGTG TGCAGGGCCGCGCGCT ATTC AGCGCGTCACGTTGCG TTTTTCGGGCGGCGT Bphy_5402 2546451 - 2545636 - | NAD-dependent epimerase/dehydratase TERM 2173 2546420 - 2546404 - G 76 -13.7 -3.14132 | CGCGGCGCGCAGGAA GCGGCCA AGC TGGCCGC CCGCACCGCTCAAAG TERM 2174 2546944 - 2546901 - H 76 -4.4 -4.79752 | gap 1, overlap 2546905 2546906 TGCAACAACACAAAA CGAACCGGCGATTCACGCGAC TGT GACGCGCCGAT-GCCGCCTCG AGTGAAGCCAATCAT Bphy_5404 2547005 - 2547772 + | hypothetical protein TERM 2175 2547797 - 2547783 - T 78 -8.5 -4.21314 | overlap 2547792 AATAACACTGCAAAA CCGCG GAAAG CGCGG CCCGCGCATGGTGCG TERM 2176 2547819 - 2547792 - T 88 -14.8 -3.60818 | gap 1, overlap 2547783 GCAAAACCGCGGAAA GCGCGGCCCGCGC ATG GTGCGG-CCGCGC CGAGAGGAGGCGAAT TERM 2177 2547830 - 2547861 + T 78 -6.5 -4.58395 | opp_overlap 2547828, overlap 2547833 CGCGCCGAGAGGAGG CGAATGGCGATGC GGGACG GCATCGCCACGTG TTTTTGAACGCTGCG Bphy_5405 2548903 - 2547887 - | 1-aminocyclopropane-1-carboxylate deaminase Bphy_5406 2549083 - 2549592 + | AsnC family transcriptional regulator Bphy_5407 2549687 - 2552134 + | PAS/PAC sensor hybrid histidine kinase Bphy_5408 2552875 - 2552141 - | phage SPO1 DNA polymerase-related protein TERM 2178 2552788 - 2552829 + g 87 -7.3 -4.82667 | overlap 2552790 CGGGCTTCGTCTTGC CGTCGTCG-GCTTCGCCCG TTTTGC CGGGCG-AGCGCGGTGAGG TTTTTCGTGTGCTCA TERM 2179 2552897 - 2552939 + H 90 -10.7 -4.57569 | gap 1, opp_overlap 2552896 2552894 GCGGGTGAGCAATAC GCGTTCCCCTGTGCCTCTTC AGCT GAACAGG-ACAGCGGAATGC TTTTTGCGGCCCTGC Bphy_5409 2552995 - 2553432 + | hypothetical protein Bphy_5410 2553571 - 2554185 + | hypothetical protein TERM 2180 2554232 - 2554204 - T 100 -22.5 -4.64861 | opp_overlap 2554201 2554200 TCGCTGTAAAACAAA GCAGCGCGCGGCA TGG TACCGCGCGCTGC GCCCTTTCATTGCCC TERM 2181 2554514 - 2554473 - T 79 -12.9 -3.34522 | gap 1 AGAGTGTTGAACGAA CCCGCAG-GGCGCGCAAGCG TAG CGCCTGCGCTTCACCGCGAG CTATCAATAATGCTC TERM 2182 2554549 - 2554525 - T 72 -9.9 -3.73647 | GCGAGCTATCAATAA TGCTCTCGCGC GAT GCGCGCGACCA GTGGCAAATGATCCG Bphy_5411 2555270 - 2554518 - | endonuclease/exonuclease/phosphatase TERM 2183 2554827 - 2554789 - G 87 -14.6 -3.64703 | gap 1 CGCGCCGTATCGAAA GCGGCAATCAGCGCGCG GATCTG CGCGCGCCG-TTCCCGC GCCGACAGTCCCAGA Bphy_5412 2557474 - 2555267 - | phospholipase D TERM 2184 2555912 - 2555870 - G 73 -11.8 -3.33261 | opp_overlap 2555909, overlap 2555836 2555839 2555835 CGTGAAGCGCCACAA CGCGGCCAGCACGACGACGC ACA GCGCGAGCGTGCCGAGCGCG AGCAGCCTGCCCATC TERM 2185 2555980 - 2555957 - G 73 -9.5 -3.85698 | TTCTTCGGGCAGAAA GTGCCGCAC CAGTTC GTGCGGCGC GACGGGCGCTTCGGC TERM 2186 2557576 - 2557530 - H 74 -13.7 -2.59668 | gap 1, overlap 2557529 2557540 GAACATCCGGACAAT GGCGC-GCAAACCCCGTTCCTG GCGA CGGGAACGCGGCTTGCCGCGTC TAAGGCAGGGTGTGC TERM 2187 2557613 - 2557584 - H 84 -15.7 -2.52464 | gap 1, opp_overlap 2557592 GCCGCGTCTAAGGCA GGGTGTGCCGCGCC GCG GGCGCGGCAC-CCG AAACGCGTGTTCAAC TERM 2188 2557700 - 2557674 - H 70 -4.2 -4.58424 | overlap 2557678 GATGAGCACACAAAA GGCAGCGCCGAA TCA CCCGGCGACCCC GCATCAGCCGAATCG TERM 2189 2557857 - 2557831 - H 71 -10.8 -3.53012 | opp_overlap 2557824 CGCGGCGTTCCGAAA GCGGGTCTGCAA ACC TTTCAGGCCCGC GTGTAGATCTTCCAG Bphy_5413 2557930 - 2558241 + | hypothetical protein Bphy_5414 2558292 - 2558480 + | hypothetical protein Bphy_5415 2560107 - 2558542 - | Rieske (2Fe-2S) domain-containing protein TERM 2190 2558616 - 2558653 + g 89 -12.7 -4.13995 | CCGCCAGCATGCCCA TCTGTTTGCCGCGGTTG CATC CGACGGCGGCGACCAGA TTTCCTTTGTCGCCG TERM 2191 2558819 - 2558842 + g 71 -13.2 -3.01712 | gap 1 GGCATGCCGAGCATG GCATGCGCAGC GAT GC-GCGCATGC TGTTGCGCAACGCGC TERM 2192 2559039 - 2559005 - G 73 -5.6 -4.37092 | overlap 2559006 2559007 ACGCCTTTCAGAAAA TCCGTCGCAGGCGT GACCCCG AGGCCCGCGACGAT GAAATCGCATGACAC TERM 2193 2559303 - 2559287 - G 74 -10.1 -3.73775 | opp_overlap 2559292 TCCATCCCGACGAAA CTCGCGC CCA GCACGAG TGCGTGCTCGCCTTG TERM 2194 2559714 - 2559764 + g 75 -6.5 -4.37534 | gap 1, overlap 2559710 CGGCGCAAGCGGCCG CGCCCGCCG-CGCCCGCGCCGACG ATCG CGAAGGTGCGCGGGTCCGCAGGCG TTTTCGTGTGGGTTT TERM 2195 2560822 - 2560855 + G 75 -13.9 -3.01712 | overlap 2560825 2560854 TGCATCGGACGGCGG CGATGGCTTGACGCT CGAA GGCGTCAAGCCGTGG TGTTCGGGCGCGCCG TERM 2196 2560825 - 2560852 + G 71 -14.2 -2.73875 | overlap 2560822 ATCGGACGGCGGCGA TGGCTTGACGCT CGAA GGCGTCAAGCCG TGGTGTTCGGGCGCG TERM 2197 2561085 - 2561138 + G 91 -17.3 -3.28712 | gap 1, overlap 2561086 2561089 CTGGCTTCTGGCATG GCGGCGCGGGTATCGCCGCGT-GCTG GTA CGGCTGCGCGGCGGCGCTCGCGTCGA TTCTGCGCGACAGCG TERM 2198 2561086 - 2561137 + G 100 -20.8 -2.57132 | gap 1, overlap 2561085 2561089 TGGCTTCTGGCATGG CGGCGCGGGTATCGCCGCGT-GCTG GTA CGGCTGCGCGGCGGCGCTCGCGTCG ATTCTGCGCGACAGC TERM 2199 2561089 - 2561134 + G 83 -17.5 -2.59431 | gap 1, overlap 2561086 2561085 CTTCTGGCATGGCGG CGCGGGTATCGCCGCGT-GCTG GTA CGGCTGCGCGGCGGCGCTCGCG TCGATTCTGCGCGAC Bphy_5416 2560367 - 2561533 + | putative acyl-CoA dehydrogenase-related protein Bphy_5417 2561545 - 2562144 + | methyltransferase type 12 Bphy_5418 2562141 - 2562797 + | glycosyl transferase family protein Bphy_5419 2563429 - 2562794 - | TetR family transcriptional regulator TERM 2200 2563722 - 2563694 - g 74 -11.7 -3.61715 | gap 1, overlap 2563695 CATGTTGTTCAACAA GC-CGGCGGGCA CCATGC CGCCCGCCGAGC TGCCCGTCGATACAC Bphy_5420 2563515 - 2564660 + | hypothetical protein TERM 2201 2564702 - 2564724 + F 100 -12.7 -5.75945 | opp_overlap 2564702 2564699 CGGGGCCGCAAAGCA GCGCGCTTC ATGAA GAGGCGCGC TTTTTTTTCGCCGAT TERM 2202 2564939 - 2564960 + G 90 -11.5 -4.36914 | overlap 2564930 2564947 2564954 CTGGATGGTCGAGGG CGCGCCGAC GCCC GTCGGCCCG TTTTCTCACGCGACG Bphy_5421 2564904 - 2565305 + | endoribonuclease L-PSP TERM 2203 2565976 - 2565989 + G 71 -8.1 -4.11216 | opp_overlap 2565958 2565985 TGCCGACGATCGCGA TGCGC AACA GCGCA TTTTGCCGCTCGCGC Bphy_5422 2565332 - 2566282 + | aldo/keto reductase Bphy_5423 2567029 - 2566292 - | peptide methionine sulfoxide reductase TERM 2204 2566652 - 2566642 - G 89 -5.4 -5.10933 | CGACGGAAAAGAAAA TCTG CAA CAGA CGGCCATACGTAATC TERM 2205 2566716 - 2566728 + g 73 -9.1 -3.92324 | GCGTGGCCCGTTTCG CCGTC GCT GACGG TTTCGTATTGCGCGG Bphy_5424 2568887 - 2567073 - | redoxin domain-containing protein TERM 2206 2567319 - 2567266 - G 71 -7.9 -4.13945 | gap 1, overlap 2567267 ATGGTCACGCGAAAA TGCAC-CGGCCTGCCGCCCGCGCCCG GCC CGAGCACGAGATGCAGATCGCGCGCG TGGAAGCGATAGACG TERM 2207 2568436 - 2568404 - G 72 -12.8 -3.12351 | CCGCCGCATACGCAA GCAGCAGC-AGCGTCG TGC CGACGCTCGC-GCCGC GCAGCGCCGCCCCCG Bphy_5425 2569452 - 2568928 - | methionine-R-sulfoxide reductase Bphy_5426 2569607 - 2570362 + | two component transcriptional regulator Bphy_5427 2570359 - 2571885 + | integral membrane sensor signal transduction histidine kinase TERM 2208 2572104 - 2572091 - g 71 -4.5 -4.56597 | opp_overlap 2572091, overlap 2572062 2572092 GCGTTGCTTGAAAAA CTGGG CGCG CCCAA TCGTTAAAGAAGCGG TERM 2209 2572236 - 2572212 - g 81 -2.8 -5.06414 | gap 1, opp_overlap 2572228, overlap 2572235 TTCCCCGAAGAAAAA CGTCGCGCTTC ATTC GCAA-GCGACG GACACCGTTTCCGCT Bphy_5428 2571945 - 2572265 + | hypothetical protein Bphy_5429 2572293 - 2573405 + | extracellular solute-binding protein TERM 2210 2573973 - 2573945 - g 73 -12.3 -3.30124 | GCGCATGCGGCAGAA GGCAAGCCGACGC TGC GGGTCGGCACGCC CGTCGCCGACGCGCG Bphy_5430 2573405 - 2575216 + | diguanylate cyclase Bphy_5431 2575295 - 2575468 + | hypothetical protein Bphy_5432 2575712 - 2576725 + | hypothetical protein TERM 2211 2576773 - 2576749 - T 89 -15.8 -3.35073 | opp_overlap 2576749 2576753, overlap 2576753 AGCATCTTCAATGAA CAAACGGCGC TCAAG GCGCCGTTTG TTTTTCTGAAGCATT TERM 2212 2576749 - 2576773 + T 100 -16.5 -4.84017 | opp_overlap 2576749 2576753, overlap 2576753 AGCATCTTCAATGAA CAAACGGCGCT CAA GGCGCCGTTTG TTTTTCTGAAGCATT TERM 2213 2576753 - 2576769 + T 100 -11.5 -4.96501 | opp_overlap 2576749 2576753, overlap 2576749 TCTTCAATGAACAAA CGGCGCT CAA GGCGCCG TTTGTTTTTCTGAAG TERM 2214 2576769 - 2576753 - T 85 -10.8 -4.3255 | opp_overlap 2576753 2576749, overlap 2576749 TCTTCAATGAACAAA CGGCGC TCAAG GCGCCG TTTGTTTTTCTGAAG Bphy_5433 2577990 - 2576803 - | acyltransferase 3 Bphy_5434 2578364 - 2579755 + | beta-galactosidase TERM 2215 2579825 - 2579809 - f 75 -9.4 -3.89524 | AGTCGAGCCGATAAA TCGGGC ATCGA GCCCGA AGGAGACGGAATGAA Bphy_5435 2579836 - 2581080 + | extracellular solute-binding protein TERM 2216 2581365 - 2581389 + G 75 -7.9 -4.20769 | gap 1, opp_overlap 2581370 GCTCGTGTCGCTGCA GCACATCGCC ATCTAC GGCG-TGTGC TTTATCTTCGCGTGT Bphy_5436 2581087 - 2582043 + | binding-protein-dependent transport systems inner membrane component TERM 2217 2582144 - 2582156 + G 78 -3.3 -4.87626 | CTACGGTTTTCTGAT CATCG CCG CGCTG TTTTTCCTGTTGCCG Bphy_5437 2582043 - 2582951 + | binding-protein-dependent transport systems inner membrane component TERM 2218 2584007 - 2583979 - g 71 -4.4 -4.4891 | gap 1 TCGATCAGGAGAAAA CGCC-CGTCGCCG TTGG CGACTCCGTGGCG TTCGCGATCGACGGC Bphy_5438 2582970 - 2584067 + | ABC transporter related TERM 2219 2584423 - 2584440 + G 72 -8.3 -3.96148 | opp_overlap 2584409 ACGCCGCGCGAGCAG GCGCTCG AGGC CGTGCGC TTTCTGATCGGGCGC TERM 2220 2584702 - 2584686 - g 71 -12.3 -3.28924 | opp_overlap 2584685 2584684 CACGGCGTCGGACAA CGTCGAG CGA CTCGACG GCTTCTTCGACGAAC TERM 2221 2584819 - 2584834 + G 73 -6 -4.36914 | opp_overlap 2584818 CTGCTCGAATCGAAG GCGCCG TTCA CGGGGC TTTTCTGCGCCAACG Bphy_5439 2584105 - 2585109 + | LacI family transcription regulator TERM 2222 2586384 - 2586343 - g 73 -12.1 -3.38272 | gap 1, opp_overlap 2586383 CAGCATCATCGACAA CGCGCGCTCGACGGGCGCGA CAG TCGCGACGGGCG-GCGAGCG CATCGGCTCGGAAGG Bphy_5440 2585309 - 2586757 + | aldehyde dehydrogenase TERM 2223 2586839 - 2586815 - f 88 -14.2 -3.59202 | opp_overlap 2586816, overlap 2586816 GATCGCGATAGACAA GCCGCCCGCC GACAT GGCGGGCGGT TTTTTTTCGGCTTGC TERM 2224 2586816 - 2586838 + F 100 -18.4 -5.81032 | opp_overlap 2586815 2586816 ATCGCGATAGACAAG CCGCCCGCCG ACA TGGCGGGCGG TTTTTTTTCGGCTTG TERM 2225 2586838 - 2586816 - f 89 -17.7 -2.752 | opp_overlap 2586816, overlap 2586815 ATCGCGATAGACAAG CCGCCCGCC GACAT GGCGGGCGG TTTTTTTTCGGCTTG TERM 2226 2587498 - 2587533 + G 70 -6 -4.23615 | gap 1, overlap 2587499 GATCGGCCAACGCGA AGGCTGGCGCGCCGTGC GCT GCACG-CGTGGCAACCA TTTCTTCGATGTGAT Bphy_5441 2587199 - 2587687 + | hypothetical protein Bphy_5442 2587723 - 2588139 + | hypothetical protein TERM 2227 2588260 - 2588274 + T 78 -3.4 -5.0925 | opp_overlap 2588258 2588260 CCCTTACCAGAACCA GCGAGG ACC CTGCGC TTTTTCATTTTCCGC Bphy_5443 2589214 - 2588279 - | LysR family transcriptional regulator Bphy_5444 2589379 - 2590587 + | aspartate transaminase Bphy_5445 2590610 - 2591392 + | class II aldolase/adducin family protein TERM 2228 2591604 - 2591558 - g 76 -9.4 -4.07568 | gap 2, opp_overlap 2591598 GCGCCTCGTCGAAAA CGGCGAGACGCGTACGGTCGCC GTGCA GGCGAGCG-AT-CGCCCCGCCG CGCTCGGCGCGCAGG Bphy_5446 2591415 - 2592398 + | 2-dehydropantoate 2-reductase TERM 2229 2592588 - 2592621 + G 70 -11 -3.33162 | gap 1 GCGCTGCTGCCCGAC CGGCGCATGGGCAAG ACCTA CATGCCCA-GCGTCG TTGTGCGCTACGGTG Bphy_5447 2592438 - 2593637 + | cytochrome P450 Bphy_5448 2594603 - 2593683 - | pyridoxal-5'-phosphate-dependent protein beta subunit TERM 2230 2594698 - 2594723 + r 73 -12.6 -2.82516 | opp_overlap 2594698 TCGGCGCGTGAAAAA GGGCGATTCG AAACTG CGGATCGCCC TGTCATGCTGCACGC TERM 2231 2594723 - 2594698 - R 90 -10.4 -4.56597 | opp_overlap 2594698 TCGGCGCGTGAAAAA GGGCGATTCG AAACTG CGGATCGCCC TGTCATGCTGCACGC Bphy_5449 2596608 - 2594740 - | ABC transporter related TERM 2232 2596277 - 2596249 - G 71 -8.1 -4.08216 | gap 1, overlap 2596267 CCAGTCGGCCGAAAA GCGCTGCACGCG ATGAAA CGCGTTC-GCGC AGATCGTACTCATCA Bphy_5450 2597081 - 2598136 + | squalene/phytoene synthase TERM 2233 2598131 - 2598116 - f 73 -11.8 -3.05463 | opp_overlap 2598111 2598106 ATCGGCGCGATCGAA GCGCGC ATCG GCGCGC GATGATGTGTTCATA TERM 2234 2598318 - 2598334 + G 72 -6.5 -4.25104 | opp_overlap 2598330 GCGCGTTTCGGCGAA CGCCTTG AAA TAGGGCG TTTTCATGAGCGCCC Bphy_5451 2598216 - 2598554 + | DOPA 45-dioxygenase Bphy_5452 2598606 - 2599337 + | beta-lactamase domain-containing protein TERM 2235 2599949 - 2599930 - g 70 -6.3 -4.21974 | opp_overlap 2599942 2599948, overlap 2599931 CGACCACGCAATAAA GGGCCGC GAATGG GCGGCCG GCGAGCATTTCAGTC Bphy_5453 2599496 - 2600149 + | glutathione S-transferase domain-containing protein TERM 2236 2600172 - 2600195 + F 100 -18.2 -2.88758 | overlap 2600179 GCCGCGATTTTCAAC GGCTGCCCGT TGCG ACGGGCAGCC TGTCTGCAGGGTTCT Bphy_5454 2600226 - 2600936 + | protein of unknown function DUF899 thioredoxin family protein Bphy_5455 2601322 - 2600957 - | hypothetical protein TERM 2237 2603798 - 2603755 - g 72 -3.6 -4.63218 | gap 1, opp_overlap 2603770, overlap 2603758 GCTGGTCGAAGAAAA CCACCTGCGC-TGGGATTCGC TGG GCGAGTTCCTCGCGCTGGCCG TGTCGCTGGAAGAGC Bphy_5456 2601950 - 2604193 + | isocitrate dehydrogenase, NADP-dependent TERM 2238 2604245 - 2604222 - f 100 -18.2 -3.17075 | opp_overlap 2604200 2604222 CGTGCTGTAAGCGAA GCCCGCGCAT TTCG ATGCGCGGGC TTTTTTCATGGACCG TERM 2239 2604222 - 2604245 + F 100 -18.2 -5.14563 | opp_overlap 2604222, overlap 2604200 CGTGCTGTAAGCGAA GCCCGCGCAT TTCG ATGCGCGGGC TTTTTTCATGGACCG Bphy_5457 2604326 - 2605546 + | major facilitator transporter TERM 2240 2605559 - 2605586 + F 72 -4.8 -4.56597 | gap 1 TGAGCGGGCGAATGG GCGCGCGATGTCA CAA TGACG-CGTTCGC TTTTTCCCGGAGCCA Bphy_5458 2605607 - 2606419 + | alpha/beta hydrolase fold protein Bphy_5459 2607907 - 2606426 - | RND efflux system outer membrane lipoprotein Bphy_5460 2608917 - 2607904 - | RND family efflux transporter MFP subunit Bphy_5461 2609123 - 2608914 - | hypothetical protein Bphy_5462 2611314 - 2609158 - | fusaric acid resistance protein region Bphy_5463 2611841 - 2611320 - | MarR family transcriptional regulator Bphy_5464 2612577 - 2611996 - | hypothetical protein TERM 2241 2612049 - 2612063 + g 81 -9.2 -4.32201 | overlap 2612050 GCGTGCACGTGTCGA TCCGCG CTT CGCGGG TTTTCGATTGCTTCG TERM 2242 2612141 - 2612175 + g 71 -10.8 -3.62522 | gap 1 GCTTCGAAAGCCTTT TTCAAG-CCCGGCTG TTTATC CAGCCGGGACTGGAA TTCTTCGGCAACTTC TERM 2243 2612318 - 2612332 + g 86 -10 -4.28375 | GCGAAGCGGATCTGA CGTGCA GAC TGCACG TTTTCCGTCTGTTGG Bphy_5465 2613878 - 2612646 - | FAD dependent oxidoreductase Bphy_5466 2614228 - 2613875 - | endoribonuclease L-PSP Bphy_5467 2615773 - 2614247 - | amidase TERM 2244 2615448 - 2615413 - G 70 -11 -3.40403 | overlap 2615414 TCTTGCCGACGAGAA TCGCGCCCGCCGCGCG CAGC CGCTCGACCAGCACGA CATCGCGCGACGGCA Bphy_5468 2617124 - 2615811 - | major facilitator transporter TERM 2245 2615994 - 2615964 - G 79 -6.7 -4.58283 | opp_overlap 2615983, overlap 2615952 2615967 GAAGCCGCCGAAAAA CGACGCGCTCACC ACATA GGTTAGCGCGATG CCCGTCGCGCGCACA TERM 2246 2616978 - 2616966 - G 72 -3.4 -4.62069 | overlap 2616968 GGCCGACGGGAAAAA GATC TGCCC GATC TGGATCGCGAAGAAG Bphy_5469 2617213 - 2617860 + | XRE family transcriptional regulator TERM 2247 2618111 - 2618092 - T 95 -11.4 -4.74132 | opp_overlap 2618092 ACACCCTATGAAAAA GGCCGCCT TCGC AAGCGGCC TTTCGTCGTTAAAGG TERM 2248 2618092 - 2618111 + T 75 -9.2 -3.84246 | opp_overlap 2618092 ACACCCTATGAAAAA GGCCGCCT TCGC AAGCGGCC TTTCGTCGTTAAAGG Bphy_5470 2620434 - 2618143 - | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase TERM 2249 2619222 - 2619269 + g 80 -12.1 -3.78409 | gap 3, overlap 2619222 CGTCGATGCGGGCGA G-CGCGGC-CTTCACCGCGGCGTT GTG AAC-CCGCGGTGACGCGCGGCGGC TTTCGATTGCCTTGG Bphy_5471 2620546 - 2621454 + | LysR family transcriptional regulator Bphy_5472 2622333 - 2621530 - | Linocin_M18 bacteriocin protein Bphy_5473 2623384 - 2622326 - | Dyp-type peroxidase family protein TERM 2250 2622515 - 2622491 - G 74 -2 -4.7373 | gap 1, opp_overlap 2622506, overlap 2622493 2622494 CGAGGGGACGAAAAA GAGCCCGCCCG TCGC CGCGCGG-CTG AAATCGAGCAGCCGG Bphy_5474 2624244 - 2623711 - | formaldehyde-activating enzyme TERM 2251 2623753 - 2623780 + g 84 -13.4 -3.71848 | overlap 2623767 GATGGTGTGGCGGTT CGCGATGAGCGT CTCC ACGCTCGGCGCG TTGTTCATCGCACGC TERM 2252 2624776 - 2624792 + H 90 -7.9 -4.98531 | overlap 2624767 CCGTGTGATCATCGC CCACGCG ATC CTCGTGG TTTTTAATTTACGGA Bphy_5475 2624879 - 2625268 + | histidine kinase Bphy_5476 2625859 - 2625473 - | hypothetical protein Bphy_5477 2626066 - 2627121 + | SMP-30/gluconolaconase/LRE domain-containing protein Bphy_5478 2627708 - 2627136 - | AsnC family transcriptional regulator TERM 2253 2627605 - 2627623 + g 70 -5.2 -4.35042 | overlap 2627601 AGCGGAATCCGCGCA TCGGCACA CAA TGCGTCGA TTATTTTCTGGTCCA Bphy_5479 2628448 - 2627720 - | ABC transporter related Bphy_5480 2629146 - 2628487 - | polar amino acid ABC transporter, inner membrane subunit TERM 2254 2629228 - 2629216 - R 74 -6.2 -4.47307 | AAATGAAGAGGAAAA CGCC TACTG GGCG ACCGGCTGTGTTACG Bphy_5481 2630031 - 2629219 - | extracellular solute-binding protein Bphy_5482 2631240 - 2630062 - | cystathionine beta-lyase TERM 2255 2631253 - 2631274 + r 72 -9.3 -3.78329 | CATATCTATTCCTCG CCGGTAGCC TCAT GGCAGCCGG TTTCAATTAATCAGG Bphy_5483 2631626 - 2631396 - | hypothetical protein Bphy_5484 2632307 - 2633368 + | putative catalase Bphy_5485 2633365 - 2633898 + | cytochrome B561 Bphy_5486 2634473 - 2633874 - | hexapaptide repeat-containing transferase Bphy_5487 2635961 - 2634606 - | gluconate 2-dehydrogenase (acceptor) TERM 2256 2635593 - 2635574 - G 75 -10.6 -3.86346 | GCATCGCGGGATAAA GCCGCCGG TTAC CCGGCGCC ACGCCCTCGCGCACG TERM 2257 2635938 - 2635908 - G 71 -10.5 -3.61398 | GCCGTCCGCGAAGAA CATCGC-GCACGCGA TCG CCGCG-GCAGCGATG AAGGAGAAAACGTGC TERM 2258 2635983 - 2635949 - G 74 -4.9 -4.56607 | gap 1, overlap 2635944 CGATGAAGGAGAAAA CGTGCGTCTTCATGGT CGTC ACCA-GCGGCCGCACG GCGACACGACGATCA Bphy_5488 2636425 - 2635967 - | hypothetical protein TERM 2259 2636090 - 2636120 + g 91 -14.6 -3.85698 | GAGCTCGGCGACTCG GCGCTCGCGCTCGC TGC GCGCCTGCGAGCGC TTTCTGCGCGCGAAC Bphy_5489 2637048 - 2636422 - | cytochrome c oxidase subunit III Bphy_5490 2639054 - 2637045 - | cytochrome c oxidase, subunit I TERM 2260 2637952 - 2637921 - G 70 -10.9 -3.33151 | overlap 2637924 GCCCGCAAAGTAATA GAACGGGACGC GAAACACAGG GCGTCCCGTCC AGATCGTCGCGATCC TERM 2261 2638034 - 2637976 - G 77 -11.8 -3.61178 | overlap 2637977 GCGATCCACGCGAAA GTCGCAATCGC-GCTCGGCACAGCGA TGGCCATGC TCGCCGCGCCGAACAGCGACAGCG-C GAGAGCCGGGATTCC Bphy_5491 2640132 - 2639065 - | cytochrome c oxidase, subunit II TERM 2262 2639122 - 2639095 - G 77 -13.4 -3.32819 | GAGATACGCCGACAA CGCGCTGGCCTC GCTG GAAGTCAGCGCG ATGCTGGGCATCAAC Bphy_5492 2642197 - 2640404 - | thiamine pyrophosphate binding domain-containing protein Bphy_5493 2642888 - 2642562 - | hypothetical protein TERM 2263 2642951 - 2642936 - R 71 -8.2 -4.07885 | GAGTGCCCCTTAAAA CGACGC TGCT GCGCCG TCGATGCGGGTTCGG Bphy_5494 2643492 - 2643238 - | hypothetical protein Bphy_5495 2646228 - 2643520 - | ATPase TERM 2264 2644494 - 2644504 + g 82 -6.8 -4.63932 | overlap 2644492 GCTCTTCCATGTTCA GCAG CCG CTGC TTTTCTTCCGCCGTC Bphy_5496 2646880 - 2646326 - | hemerythrin HHE cation binding domain-containing protein Bphy_5497 2649448 - 2647064 - | phosphoketolase Bphy_5498 2649656 - 2650177 + | hypothetical protein TERM 2265 2650336 - 2650355 + T 79 -13.6 -3.05384 | opp_overlap 2650336 ATGCGCCATGTAAAA CGGAGCAC CTGA GTGCTCCG TTGCATGCCAGCGCA TERM 2266 2650355 - 2650336 - T 95 -13.6 -4.18197 | opp_overlap 2650336 ATGCGCCATGTAAAA CGGAGCAC CTGA GTGCTCCG TTGCATGCCAGCGCA TERM 2267 2650377 - 2650395 + T 75 -12.4 -3.30474 | overlap 2650392 2650392 GCCAGCGCAAGCCCG CGTCGTCG AGC CGACGGCG TTACTCCTTATCGCC Bphy_5499 2651730 - 2650396 - | argininosuccinate synthase TERM 2268 2650744 - 2650763 + g 77 -12.1 -3.58522 | opp_overlap 2650743 2650740 GCCCTGATACAGCAG GCGGCCG AGGCGG CGGCCGC TTTCGCGGTACTGCT TERM 2269 2651797 - 2651811 + r 79 -12.8 -3.28712 | opp_overlap 2651781 2651783 2651786 ACGAGGCCGCCCCCG CCCCGG ATT CCGGGG TTGTCAGGCGGGCGC Bphy_5500 2652413 - 2651841 - | hypothetical protein Bphy_5501 2653750 - 2652410 - | TRAP transporter solute receptor TAXI family protein Bphy_5502 2653903 - 2654313 + | response regulator receiver protein TERM 2270 2654571 - 2654541 - g 71 -12.4 -3.29144 | overlap 2654543 2654544 GGATCGGTTGGAGAA GACGGGCCGGCCCA AGA CGGGCCGGCCCAAA AACGGCCGCTGGCAT TERM 2271 2654569 - 2654543 - g 100 -19.4 -3.21395 | overlap 2654541 2654544 ATCGGTTGGAGAAGA CGGGCCGGCCCA AGA CGGGCCGGCCCA AAAACGGCCGCTGGC TERM 2272 2654568 - 2654544 - g 100 -20.7 -2.52623 | overlap 2654543 2654541 TCGGTTGGAGAAGAC GGGCCGGCCCA AGA CGGGCCGGCCC AAAAACGGCCGCTGG Bphy_5503 2654475 - 2655812 + | RND family efflux transporter MFP subunit Bphy_5504 2655862 - 2659131 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Bphy_5505 2659133 - 2660623 + | RND efflux system outer membrane lipoprotein TERM 2273 2660975 - 2660930 - g 85 -12 -4.15044 | overlap 2660934 GGCGTCGTGAAGAAA GTCACGCTGTCG-GACGACTAC AAGC GC-GTCGTCGCGACAGCGGAAC TCACGCGCGATGCCA TERM 2274 2660971 - 2660934 - g 71 -13.6 -2.75825 | overlap 2660930 TCGTGAAGAAAGTCA CGCTGTCG-GACGACTAC AAGC GC-GTCGTCGCGACAGCG GAACTCACGCGCGAT Bphy_5506 2660696 - 2662297 + | hypothetical protein TERM 2275 2662586 - 2662571 - g 85 -11.8 -4.11484 | opp_overlap 2662579 GCGAACCGCTGAAAA GCGGCG TTGC CGCCGC GATTGCCGGCGACCT Bphy_5507 2662294 - 2662899 + | hypothetical protein Bphy_5508 2663769 - 2662918 - | hypothetical protein TERM 2276 2662955 - 2662975 + g 85 -12.5 -4.14392 | CTCGCCGGACGGTCG GGCTGACGG TAG CCGTCCGCC TTTTGCCGCTTGGGC Bphy_5509 2664095 - 2663838 - | hypothetical protein Bphy_5510 2665902 - 2664889 - | hypothetical protein TERM 2277 2665348 - 2665291 - G 100 -26.4 -3.18264 | gap 2, overlap 2665268 CCGCCGATGCAGCAA CGCCACCCGCTCCTGCATCAGCTCGCGC CCGC GCGCGAGCCG-TGC-GGCGCGCGTGGCG GCCAGCATCGAAAGT TERM 2278 2666403 - 2666380 - H 74 -7.4 -4.31835 | gap 1, overlap 2666382 AATCCGCACAATAAA GCGCTTGCTGC ACT GC-GCAAGCTC GCCTATACCAATAGA Bphy_5512 2666428 - 2667591 + | poly (3-hydroxybutyrate) depolymerase Bphy_5513 2667618 - 2668178 + | hypothetical protein TERM 2279 2668304 - 2668339 + G 74 -11.1 -3.57144 | gap 1, opp_overlap 2668308 CGCAAGTGCAGGATA CGA-ACGCGTCGCGGG CCGAA CGCGCGACGCGGCTCG TTTACCACTCCCACG TERM 2280 2668334 - 2668308 - g 86 -15.8 -3.29649 | opp_overlap 2668304 AGTGCAGGATACGAA CGCGTCGCGGGC CGA ACGCGCGACGCG GCTCGTTTACCACTC Bphy_5514 2668261 - 2668449 + | AraC family transcriptional regulator Bphy_5515 2669552 - 2668455 - | monosaccharide-transporting ATPase Bphy_5516 2670586 - 2669549 - | monosaccharide-transporting ATPase TERM 2281 2669629 - 2669593 - G 78 -14.4 -3.27704 | gap 1, overlap 2669588 ACTTTGCAAATGCAA GCGCGCGCATCAGTTGC CGCA GCAGCAG-TGCGCGCGC GACGCTCGACTGGAT Bphy_5517 2672133 - 2670583 - | ABC transporter related TERM 2282 2671307 - 2671350 + g 91 -16.6 -3.54424 | gap 1, opp_overlap 2671306 2671307, overlap 2671306 2671330 TGCATCGACAGGAAC GGCGCGGCGCCCG-CGCGCTG CTG CGGTGTGTCGGGCGCACCGCC TTTGAGGCGCTCCGA TERM 2283 2672170 - 2672139 - R 100 -15.9 -3.6608 | gap 1, overlap 2672112 2672108 ATGACTTCATGGAAA TCCGGCGCGCGCCG TCTGC CAG-GCGCGCCGGA CGACTCGTGCGGCTA Bphy_5518 2673162 - 2672194 - | periplasmic binding protein/LacI transcriptional regulator Bphy_5519 2673984 - 2673664 - | hypothetical protein Bphy_5520 2674880 - 2674056 - | integral membrane protein TerC TERM 2284 2675289 - 2675309 + G 71 -10.3 -3.61103 | GACGTGCATGAGGCG GCGAGCGGC AAA GTCGCGCGC TTTGCCGTCGGGTTG Bphy_5521 2675031 - 2675918 + | LysR family transcriptional regulator TERM 2285 2675925 - 2675952 + F 72 -4.8 -4.57569 | gap 1 CATGGCTGAGTGCGG CCGAGCGCGTCTG ACT CAGGAG-GTTCGG TTTTTCCGAACCTGG Bphy_5522 2676043 - 2676399 + | hypothetical protein TERM 2286 2676456 - 2676428 - T 78 -14.6 -2.52464 | opp_overlap 2676431 GGGGTGCGGAAGGCA GGACGGCATCGC CGGGC GCGATGCCGTTC GCTACTCCCTCATCG TERM 2287 2676431 - 2676453 + T 85 -14.9 -3.10164 | opp_overlap 2676428 GTGCGGAAGGCAGGA CGGCATCGC CGGGC GCGATGCCG TTCGCTACTCCCTCA Bphy_5523 2677279 - 2676458 - | silent information regulator protein Sir2 TERM 2288 2677482 - 2677457 - H 79 -5.4 -4.78848 | CGTCGAAAGATAAAA CGCAACGCCA CCCTGC TGATGTTGCG CGCTGTATCAGGCGC Bphy_5524 2677636 - 2678274 + | lysine exporter protein LysE/YggA TERM 2289 2678319 - 2678342 + F 100 -16.8 -4.75404 | opp_overlap 2678319 GCCCAATGGAACAAA GGGGAGTACG AAAT CGTACTCCCC TTTTTGATGCGATTT TERM 2290 2678342 - 2678319 - f 100 -16.8 -4.2528 | opp_overlap 2678319 GCCCAATGGAACAAA GGGGAGTACG AAAT CGTACTCCCC TTTTTGATGCGATTT Bphy_5525 2678589 - 2678915 + | hypothetical protein Bphy_5526 2679013 - 2679816 + | acetoacetate decarboxylase TERM 2291 2679923 - 2679901 - g 82 -6.8 -4.67048 | overlap 2679903 GCACTGCAAAACAAA GTCGCGCTCG TGA CGGGCGCAGC AAGCGGCATCGGCGA Bphy_5527 2679883 - 2680665 + | 3-hydroxybutyrate dehydrogenase Bphy_5528 2680676 - 2681929 + | patatin TERM 2292 2681966 - 2681999 + T 85 -10.9 -3.94877 | ATACGCTGCTGTGAT TTGCGGCTCCGCGAC ACAC GTGACGGAGCCGCCA TTGTTATTGAGCGAT Bphy_5529 2683499 - 2682042 - | phosphoesterase Bphy_5530 2683873 - 2684361 + | XRE family transcriptional regulator Bphy_5531 2685545 - 2684454 - | ISRSO5-transposase protein TERM 2293 2686249 - 2686232 - g 89 -12.7 -3.96148 | opp_overlap 2686247 TTCGGCGACCAGAAA GCGCTCG TCGT CGAGCGC TTCGACCGACGGCTG Bphy_5532 2685716 - 2686858 + | HipA domain-containing protein TERM 2294 2686876 - 2686843 - f 77 -2.2 -5.04222 | GAAGCAAAGCAAAAA GCTCGCGGCGGC ATAGCCTTCG GCGGCTGCGCGC TCAGCCGATCACTGG Bphy_5533 2687189 - 2687632 + | NUDIX hydrolase TERM 2295 2687726 - 2687750 + T 72 -9.9 -3.72695 | opp_overlap 2687726 2687727, overlap 2687727 2687748 CGGTATCAAGCAAAA GCGCCGGCC TGACATC GGCCGGCGG TTTCATCGAAGCAGT TERM 2296 2687750 - 2687726 - T 85 -9.9 -4.45544 | opp_overlap 2687726 2687727 2687748, overlap 2687727 CGGTATCAAGCAAAA GCGCCGGCC TGACATC GGCCGGCGG TTTCATCGAAGCAGT TERM 2297 2687727 - 2687749 + T 76 -13.4 -2.83403 | opp_overlap 2687726 2687727, overlap 2687726 2687748 GGTATCAAGCAAAAG CGCCGGCC TGACATC GGCCGGCG GTTTCATCGAAGCAG TERM 2298 2687749 - 2687727 - T 82 -13.4 -3.26844 | opp_overlap 2687727 2687726 2687748, overlap 2687726 GGTATCAAGCAAAAG CGCCGGCC TGACATC GGCCGGCG GTTTCATCGAAGCAG Bphy_5534 2688079 - 2687771 - | putative signal peptide transmembrane protein Bphy_5535 2688416 - 2688138 - | hypothetical protein TERM 2299 2688313 - 2688269 - G 76 -14.1 -3.14344 | TATGCTCGGCAGCAA CCGTCTGCGCGCTGACACCGC GTT GCGATGCAGGTGCGCCGACGG ACGGACGATAGAACG Bphy_5536 2688720 - 2689661 + | luciferase family protein Bphy_5537 2690615 - 2689689 - | exodeoxyribonuclease III Xth TERM 2300 2689729 - 2689739 + g 100 -8.2 -5.40072 | overlap 2689716 2689728 GCCGCACGCGTCGAT CGCG CAG CGCG TTTTTTTGCGGCCGC TERM 2301 2689754 - 2689771 + g 79 -5.5 -4.67982 | overlap 2689767 GTTTTTTTGCGGCCG CTGCGCT TCCG GGTGCAG TTTTCTTGACTGCAG TERM 2302 2689781 - 2689801 + g 85 -7.6 -4.67982 | overlap 2689767 2689796 GTGCAGTTTTCTTGA CTGCAGTT TTCTT GACTGCAG TTTTCTTCACTGCAG TERM 2303 2689796 - 2689816 + g 82 -6.9 -4.63486 | overlap 2689781 CTGCAGTTTTCTTGA CTGCAGT TTTCTTC ACTGCAG TTTTCTTCCCGACAT TERM 2304 2690078 - 2690098 + g 77 -12.5 -3.66178 | overlap 2690091 AGCCTTGATCGAGCA GCCGGGCGT AGC ACGCGCGGC TTTCCGGTTGCAGCA Bphy_5538 2691079 - 2690672 - | hypothetical protein TERM 2305 2691185 - 2691175 - H 85 -3.2 -5.40072 | overlap 2691178 CCTCGCCGAAAAAAA TGAC AGC GCCA TGCCGCTCATTCTTT TERM 2306 2691487 - 2691501 + G 79 -5.6 -4.63542 | overlap 2691489 CTGGGCAGGCTGTCG CTTGCC TTC GGCACG TTTTTCAGCATTCTC Bphy_5539 2691448 - 2692032 + | hypothetical protein TERM 2307 2692313 - 2692285 - g 81 -13.7 -3.53012 | opp_overlap 2692280 2692279, overlap 2692286 TTGTGGTCGGCGAAA TGGCGCGCGCGCG TGG CGCGGGCACGCCG ATCCGGTTGGTGTCG TERM 2308 2692312 - 2692286 - g 84 -17.2 -2.71712 | opp_overlap 2692280 2692279, overlap 2692285 TGTGGTCGGCGAAAT GGCGCGCGCGCG TGG CGCGGGCACGCC GATCCGGTTGGTGTC Bphy_5540 2692029 - 2693888 + | putative DnaK-related protein (molecular chaperone) TERM 2309 2694938 - 2694977 + G 87 -5.7 -5.01732 | gap 1, overlap 2694965 CGCGCGCACCACGCA TCTGACGCGCGACGACAT CGAGC AGGTCGTCGT-CGACGGA TTTTTTCCGCAGGTT TERM 2310 2695261 - 2695225 - g 71 -10.8 -3.64703 | gap 1 GCGCGCTGACGCAAA GGCTCGCCGACACGCTC GGCG GATGGCG-CGGCGAGCC GCTGCACGTGCTGCA Bphy_5541 2693901 - 2696750 + | DnaK-related protein Bphy_5542 2697299 - 2696754 - | UspA domain-containing protein SEQUENCE gi|186470346|ref|NC_010625.1| Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence (length 1904893) Bphy_5543 4231 - 644 - | indolepyruvate ferredoxin oxidoreductase TERM 1 685 - 698 + g 100 -2.3 -5.75945 | overlap 686 GCGTTCGATAGTCGG CGAGC AAGC GCTCC TTTTTTTTCGCCGCT TERM 2 2924 - 2954 + g 73 -11.8 -3.35046 | gap 1, overlap 2927 TTTCGCTTCGATGAT CGCGACGCGCGCG AGCATG CGCGCGCG-CACG TCTTTCGGCAGATCC TERM 3 2927 - 2956 + g 86 -14.9 -3.54424 | overlap 2924 CGCTTCGATGATCGC GACGCGCGCGAGC ATGC GCGCGCGCACGTC TTTCGGCAGATCCGC Bphy_5544 4334 - 5239 + | LysR family transcriptional regulator Bphy_5545 5811 - 7349 + | methyl-accepting chemotaxis sensory transducer Bphy_5546 7696 - 7346 - | hypothetical protein Bphy_5547 8864 - 7836 - | LacI family transcription regulator TERM 4 8117 - 8103 - G 79 -6.4 -4.58395 | overlap 8106 GTCATTGCCGAAAAA GATGCC GTC GACATC CGGCCGCCGCTGTAG TERM 5 8827 - 8839 + g 70 -6.2 -4.29738 | TCGAGCGTCGGCCGT CCCG TGCTC CGGG TTTTCCTAGGTGTCG Bphy_5548 9009 - 9551 + | carbohydrate kinase Bphy_5549 9617 - 10969 + | major facilitator transporter TERM 6 11753 - 11737 - g 71 -9.4 -3.71848 | opp_overlap 11747 CTCGCGCATCAACAA CGCCAC GGCGG GTGGCG GCGCCTTCAGTGCCG Bphy_5550 11066 - 12295 + | porin TERM 7 12325 - 12343 + T 100 -16 -5.48825 | opp_overlap 12318 CCGAAGCATCGCGAG GCGCCGCA ATT TGCGGCGC TTTTTTTCGCTCCTC Bphy_5551 13294 - 12617 - | hypothetical protein TERM 8 13742 - 13730 - H 91 -7.7 -5.15969 | TGTCAAGCGAAAAAA CTTCG CAT CGAAG GACCGGTATTCTGGT TERM 9 13962 - 13979 + H 74 -7.7 -4.11216 | gap 1 GGAGGCGTGCGGTCA GCG-GTCG AGG CGACTCGC TTTTGCACATAGCCG Bphy_5552 14145 - 14597 + | UspA domain-containing protein Bphy_5553 14922 - 15254 + | ABC-type metal ion transport system periplasmic component/surface antigen-like protein Bphy_5554 16732 - 15377 - | Na+/H+ antiporter NhaA TERM 10 16946 - 16969 + H 72 -6 -4.30719 | opp_overlap 16959 GCGTTTTCCGGCATT CATCGTCAGG AGAG CTTGAAGATG TTTCTTCTCGCAACG Bphy_5555 17165 - 18850 + | sulfatase Bphy_5556 18932 - 19996 + | putative nonspecific acid phosphatase, NapD-like protein Bphy_5558 21355 - 22125 + | hypothetical protein TERM 11 22201 - 22233 + T 77 -10.6 -3.83568 | gap 1, overlap 22189 GTCCGGCGGCAGGTT GCGGACGTCTATCGC TGAC GCGACAGGCGTC-GC TTATTGTGGCTATGC Bphy_5559 22985 - 22209 - | hypothetical protein TERM 12 22895 - 22935 + g 80 -14.8 -3.16564 | opp_overlap 22895 GCGCGAAGACATACA GGGCTC-GCGCGTCCTCCGG CAC TCGGAGGA-GCGCAGAGACC TTAGTGCCGTCGGGC TERM 13 22935 - 22895 - G 76 -14.1 -3.10493 | opp_overlap 22895 GCGCGAAGACATACA GGGCTC-GCGCGTCCTCCG GCACT CGGAGGA-GCGCAGAGACC TTAGTGCCGTCGGGC Bphy_5560 23476 - 24297 + | integrase family protein TERM 14 24308 - 24339 + T 91 -8.2 -5.14563 | GCTAGATTCTTGCCA CCTTTTGAAATCAG TGTA TTGATTTTAAAGGG TTTTTTGGTGCCCAG Bphy_5561 24815 - 24543 - | hypothetical protein Bphy_5562 27529 - 25127 - | PQQ-dependent dehydrogenase glucose/quinate/shikimate family protein TERM 15 25598 - 25631 + g 90 -15.9 -3.67597 | overlap 25599 CGTTTCCGTACCCGT GCCGCCCGAGCCGCT AGCG GGCGGCTCGAGCGGA TTGTTCGGTCCGCGC TERM 16 25599 - 25630 + g 93 -19.4 -2.80344 | overlap 25598 GTTTCCGTACCCGTG CCGCCCGAGCCGCT AGCG GGCGGCTCGAGCGG ATTGTTCGGTCCGCG Bphy_5563 27907 - 28749 + | hypothetical protein Bphy_5564 28755 - 29645 + | hypothetical protein Bphy_5565 29645 - 30502 + | MltA-interacting MipA family protein Bphy_5566 31639 - 30689 - | LysR family transcriptional regulator TERM 17 31032 - 30989 - G 74 -11.7 -3.59979 | gap 1, overlap 30990 GGCGTCCACGTGAAA GCGCCATTCCGGCG-CAGGC GTGAG GCCCGTCGCCTGAATGGCAA TATGCGACGCGAGGT TERM 18 31031 - 30990 - G 75 -15.2 -2.75844 | gap 1, overlap 30989 GCGTCCACGTGAAAG CGCCATTCCGGCG-CAGGC GTGAG GCCCGTCGCCTGAATGGCA ATATGCGACGCGAGG Bphy_5567 33747 - 31675 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding Bphy_5568 34437 - 33820 - | glutathione S-transferase domain-containing protein Bphy_5569 36476 - 34584 - | methyl-accepting chemotaxis sensory transducer with Cache sensor Bphy_5570 37326 - 36709 - | ThiJ/PfpI domain-containing protein Bphy_5571 37414 - 38748 + | transcriptional regulator Bphy_5572 40235 - 38769 - | general substrate transporter TERM 19 40795 - 40755 - g 70 -4.6 -4.36914 | gap 1 GTCGTTTCGACAAAA GAGCGCTGGCGGGCTGCAT CGTG ATGG-GCGGGCTAGCGCTC GCGGCAGTCGTGCTG TERM 20 41251 - 41219 - g 75 -9.2 -3.97947 | gap 1, overlap 41220 CGCACGCAGGAGAAA GCCGTACGAAGCAGA CAGG TC-GCTTCGCACGGA ACGAGTCACGCGAAG TERM 21 41250 - 41220 - g 71 -12.7 -2.98447 | gap 1, overlap 41219 GCACGCAGGAGAAAG CCGTACGAAGCAGA CAGG TC-GCTTCGCACGG AACGAGTCACGCGAA Bphy_5573 40733 - 41401 + | hypothetical protein TERM 22 41907 - 41865 - g 74 -12.7 -3.29144 | gap 1, opp_overlap 41864 41887 41906, overlap 41835 41878 CGACGCCGTGGAGAA CGCCGAAGAACAACTCGCGG CGCG CCGCGAGCGG-CCTTCGGGG CGTTTGCGGGTCGAT TERM 23 41895 - 41878 - g 89 -12.7 -3.95725 | opp_overlap 41864 41887, overlap 41835 41865 AACGCCGAAGAACAA CTCGCGG CGCG CCGCGAG CGGCCTTCGGGGCGT Bphy_5574 41629 - 42531 + | LysR family transcriptional regulator Bphy_5575 42785 - 43990 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 24 44014 - 44049 + T 75 -11.8 -3.20637 | overlap 44009 CACTGCATGCAGTGG CGGCGCGTGATTGTCT CGAG GGGCCGTCACGCGCTG TTGCATATTCCCTTT Bphy_5576 44600 - 44220 - | hypothetical protein TERM 25 44277 - 44318 + g 70 -7.3 -4.03234 | gap 1, opp_overlap 44285 44314 GTGCGGCAACGTCCT GGCGAGAATCATGTCGAG TGCGTTT CTCGGCATGACAC-CGCC TTTCTGTAGCGGCCG Bphy_5577 44869 - 45624 + | NmrA family protein Bphy_5578 45837 - 46670 + | amidohydrolase 2 Bphy_5579 47137 - 48378 + | protein serine/threonine phosphatase Bphy_5580 48382 - 48945 + | hypothetical protein Bphy_5581 48964 - 49359 + | putative lipoprotein Bphy_5582 49362 - 50087 + | diguanylate cyclase Bphy_5583 50267 - 50130 - | hypothetical protein Bphy_5584 50449 - 51027 + | NnrU family protein Bphy_5585 51928 - 51032 - | LysR family transcriptional regulator Bphy_5586 52127 - 52543 + | succinate dehydrogenase, cytochrome b556 subunit Bphy_5587 52547 - 52915 + | succinate dehydrogenase, hydrophobic membrane anchor protein TERM 26 53379 - 53321 - g 80 -13.8 -3.32268 | gap 2, overlap 53312 GAACTACGGCGAGAA GCCCGTGCAGC-GCGCGTGCGCTG-CCG CTGAC CGGACCGGCCACGCGCTGCTGCACACGC TGTACCAGCAGAACG Bphy_5588 52920 - 54695 + | succinate dehydrogenase, flavoprotein subunit TERM 27 54704 - 54681 - f 74 -11 -3.53012 | opp_overlap 54673 54668 TCGGTGCCGCCCAAA GCGCGTACCT TCTA AGGCACACGC ACAAGTCAAAGGACC Bphy_5589 54727 - 55431 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein Bphy_5590 55431 - 55703 + | hypothetical protein Bphy_5591 55996 - 57555 + | methyl-accepting chemotaxis sensory transducer TERM 28 59310 - 59289 - g 77 -8.7 -4.2828 | gap 1, overlap 59290 GGTGACGCAGCAAAA CGCCGCGCTC GTC GAGCA-GGCG ACGGCGGCGGCTCAG TERM 29 59451 - 59439 - g 83 -9.1 -4.43477 | overlap 59443 GTCATCGAAGCAAAA CGCAG CGC CTGCG AAGAAGGCCGTCTTG Bphy_5592 57817 - 59520 + | methyl-accepting chemotaxis sensory transducer Bphy_5593 59818 - 59525 - | hypothetical protein TERM 30 59611 - 59595 - G 71 -7.9 -4.10657 | overlap 59596 TGATACGTCGCAAAA CCGCCCA CGG CGAGCGG CAGCGCATGAACGGC TERM 31 60243 - 60257 + G 72 -12.8 -3.14564 | opp_overlap 60218 CAATTGCAGACGTGG CGCGCC GAA GGCGCG TTGATCGCAGCATCG Bphy_5594 59928 - 60893 + | AraC family transcriptional regulator Bphy_5595 61903 - 60962 - | periplasmic binding protein/LacI transcriptional regulator TERM 32 61140 - 61150 + g 77 -5.4 -4.67357 | overlap 61130 CCCGCCATCAGGCCG GACA TGA TGTC TTCTTTTTGTTCCTT Bphy_5596 63035 - 62010 - | monosaccharide-transporting ATPase TERM 33 62751 - 62735 - G 86 -6.5 -4.86001 | overlap 62744 AGTAGGTGAGAAAAA CACCGCA AAT TACGGCG GTAAACGTCATCAAC TERM 34 62828 - 62809 - G 74 -10 -3.80573 | GTGATGATGACGAAA GTACTCGC AATC GCGAGCAC GCCATTGACGGCTGT TERM 35 62988 - 62969 - G 74 -11.4 -3.63744 | opp_overlap 62985, overlap 62967 CCGTCGGCGAAAAGA GCCGGGCT CTGA AGCCCGAC GTACGTCGTTCGTTG Bphy_5597 64566 - 63055 - | ABC transporter related TERM 36 63826 - 63840 + g 70 -5.6 -4.25283 | AGCATTCTGATGAGG CTCGAC GTC GGCGAG TTTTCGTCCGACCAT Bphy_5598 65375 - 64614 - | GntR family transcriptional regulator Bphy_5599 65526 - 66824 + | mandelate racemase/muconate lactonizing protein Bphy_5600 66851 - 67573 + | haloacid dehalogenase, type II TERM 37 67578 - 67617 + T 95 -15.3 -3.75015 | gap 2, opp_overlap 67583, overlap 67563 67583 TTGGCGTATGACCTT GG-A-AAGGCATGACGGCA ATTG TGCCGTCATGCCTTGTACC TTTACTACCGCTTAT TERM 38 67583 - 67610 + T 100 -20 -3.48807 | opp_overlap 67583, overlap 67563 67578 GTATGACCTTGGAAA GGCATGACGGCA ATTG TGCCGTCATGCC TTGTACCTTTACTAC TERM 39 67610 - 67583 - T 100 -20 -3.56092 | opp_overlap 67563 67578 67583 GTATGACCTTGGAAA GGCATGACGGCA ATTG TGCCGTCATGCC TTGTACCTTTACTAC Bphy_5601 68657 - 67629 - | alpha/beta hydrolase domain-containing protein Bphy_5602 69114 - 68689 - | OsmC family protein TERM 40 68742 - 68758 + g 73 -12.3 -3.35679 | TTGCATTCGAGTACG GGCACAC GAT GTGTGCC TTGTCGATAAGCGCC Bphy_5603 69874 - 69308 - | TetR family transcriptional regulator TERM 41 70365 - 70376 + H 84 -7.2 -4.72556 | opp_overlap 70352 TTTCCCGATTTTACC GGCG ACAT CGCC TTTTCTGATTTTTAC TERM 42 70794 - 70739 - H 100 -22.6 -3.0792 | opp_overlap 70748 70777 GAACATCCGATCCAA CGCCAGATACATGCGGACCCCTCCCG CGAG CGGGAGGCTCCCGCATGTTCCTGGCA AGCGCATGCGAGATT TERM 43 70748 - 70785 + H 85 -15.5 -3.14132 | opp_overlap 70739, overlap 70777 ATCCAACGCCAGATA CATGCGGACCCCTCCCG CGAG CGGGAGGCTCCCGCATG TTCCTGGCAAGCGCA TERM 44 71536 - 71490 - g 82 -6.4 -4.65895 | gap 1, opp_overlap 71525 GCGCCGACGCAAAAA GCGGGCGGCACGGCGAGCGGT CTGATC ACGGC-CGACACGCCGACCAC CGACGGTCTGCGCGT Bphy_5604 70911 - 73229 + | hypothetical protein TERM 45 73592 - 73632 + F 83 -14.2 -3.04144 | GAGCGACGCCGCGCT CGCGCTG-CCTATACGCGTT CAA AGCGCGTATAGGTCGGC-CG TCTTCAGGCTGCGGC TERM 46 73714 - 73695 - f 71 -10 -3.48657 | opp_overlap 73706 73712, overlap 73693 73696 TCAAAGATCGAAAGA CGCGTGCA CATC TGCACGCA AGCGGGCGGTGTTGC TERM 47 74339 - 74360 + G 95 -7.9 -5.03145 | opp_overlap 74338 74339 TGACCAGCGACGAAG TGGTGGCCG GTTT CGGCAGCCA TTTTTTCGGCGATTA Bphy_5606 73999 - 75456 + | integral membrane sensor signal transduction histidine kinase Bphy_5607 75950 - 75453 - | hypothetical protein TERM 48 75849 - 75864 + g 70 -4.7 -4.3898 | TAGGTAAATGTCGAT GACGT GGTGAA ACGTC TTTTGTGGCGATCCT Bphy_5608 76150 - 76605 + | signal transduction protein Bphy_5609 77148 - 76633 - | AraC family transcriptional regulator TERM 49 77261 - 77299 + r 81 -13.2 -3.59979 | gap 2, opp_overlap 77281 77282 GTAGCGGCCGGGTCG CGGCGGTG-TGC-CCGGC ACAAG GCCGGAGGATCACCGCCG TTTCCGGTAAAGCGA Bphy_5610 78522 - 77779 - | Asp/Glu/hydantoin racemase Bphy_5611 79736 - 78519 - | hypothetical protein TERM 50 78946 - 78971 + g 72 -8.9 -4.18197 | gap 1, overlap 78948 CCGGGTTCCGAGATC GCGCGC-GCGGC CAG GCCGCAGTGCTC TTTTAGATAACGGGT TERM 51 78948 - 78969 + g 74 -10.1 -3.69216 | gap 1, overlap 78946 GGGTTCCGAGATCGC GCGC-GCGGC CAG GCCGCAGTGC TCTTTTAGATAACGG TERM 52 79702 - 79683 - G 91 -6.4 -5.03314 | gap 1 TCCACTGCCAAAAAA CGCT-CCGC CGA GCAGCAGCG GTTCCAGATCTTCCC Bphy_5612 82044 - 79726 - | putative sigma54 specific transcriptional regulator TERM 53 80314 - 80299 - G 72 -9 -4.07885 | opp_overlap 80299 GACGCCCCGGTAAAA CGCGAA GCCG TTCGCG ATCGACACCGTTTCG TERM 54 81995 - 82005 + g 77 -4.6 -4.64861 | GCGCCGATGAACGCG CCGG GAT TCGG TTTGTTTTGGGCGAA TERM 55 82220 - 82183 - R 76 -4.7 -4.86731 | opp_overlap 82183 GTCCTTGAAATAAAA CGTCGCGCCTGACGTTG TGTG CGAAGTCACAGGCGACG TCACTACCGGCGATA Bphy_5613 83792 - 82509 - | cystathionine gamma-synthase TERM 56 83749 - 83761 + g 70 -5.5 -4.22338 | overlap 83743 GTTTCGGGGTGCAGG TCGCG GCC TGCGA TTTTGCGCTTGTGAT Bphy_5614 84530 - 83838 - | phosphoesterase PA-phosphatase related TERM 57 84163 - 84146 - G 76 -5.5 -4.53034 | GCGAGACAATGAAAA TGCCCGT GGCC ACGGCCA TCCACAGCATTGCGT TERM 58 84835 - 84812 - R 100 -14.6 -5.42259 | CGAGCCGGAAAAAAA CGTGCGGCAA GCAG CTGCCGCACG TCTCGACACGACTCA Bphy_5615 86520 - 84862 - | type I phosphodiesterase/nucleotide pyrophosphatase Bphy_5616 87889 - 86939 - | response regulator receiver modulated CheW protein Bphy_5617 88917 - 88060 - | abortive infection protein TERM 59 89371 - 89387 + G 76 -5.7 -4.57569 | CGTAGGCCTTGACCG GTGGCTC ATT GCGCCGC TTTTTCCGGCGATCA Bphy_5618 89285 - 90571 + | major facilitator transporter Bphy_5619 90669 - 91598 + | LysR family transcriptional regulator TERM 60 91885 - 91844 - g 91 -16.7 -3.71917 | gap 1, opp_overlap 91851 91877, overlap 91850 ACCGCAAAGGCGAAA TCGAAATCACG-AGCGGCGC CGC GCGCCACTACGTGTTCTCGA ACATCTTCGAAGTCG TERM 61 91879 - 91850 - g 75 -10.7 -3.85567 | gap 1, opp_overlap 91851 91877, overlap 91844 AAGGCGAAATCGAAA TCACG-AGCGGCGC CGC GCGCCACTACGTGT TCTCGAACATCTTCG TERM 62 91851 - 91878 + G 73 -12 -3.31248 | gap 1, opp_overlap 91850 91844, overlap 91877 AGGCGAAATCGAAAT CACG-AGCGGCGC CGC GCGCCACTACGTG TTCTCGAACATCTTC TERM 63 91994 - 92020 + G 70 -10.9 -3.40403 | GGCAGTCGCGCTGGT TCGCGAGTTCG CACGA CGAGTTCGCGA TTCTGATGGACGGCA Bphy_5620 91783 - 92286 + | hypothetical protein TERM 64 93189 - 93167 - g 89 -14.8 -3.7941 | overlap 93169 CATCGGCGACAAGAA CACGGGCGCG CCG CGCGCCCGCA TCACGATGCGCGCCG TERM 65 93187 - 93169 - g 93 -17.4 -3.4811 | overlap 93167 TCGGCGACAAGAACA CGGGCGCG CCG CGCGCCCG CATCACGATGCGCGC Bphy_5621 92331 - 93350 + | hypothetical protein Bphy_5622 93386 - 94852 + | aldehyde dehydrogenase TERM 66 94954 - 94974 + G 86 -14.7 -3.48276 | overlap 94957 CCGAAGTCGAGCGGC TCGGCGCGC GGC GCGCGCTGA TTCTCTCGACGCCCG Bphy_5623 94866 - 95933 + | iron-containing alcohol dehydrogenase Bphy_5624 95964 - 96845 + | intradiol ring-cleavage dioxygenase Bphy_5625 96842 - 97153 + | YCII-related Bphy_5626 97150 - 97485 + | Rieske (2Fe-2S) domain-containing protein Bphy_5627 97555 - 98022 + | hypothetical protein TERM 67 98167 - 98185 + F 72 -8.8 -3.83026 | CTCGTGGCGATAGAG GCAGCGGC TGT GTTGCTGC TTTCGTATCGAGCCC Bphy_5628 98390 - 100144 + | sulfate transporter TERM 68 100309 - 100322 + F 80 -2.3 -5.24531 | TAGCTGCAATCTTCT TCACG TCGG CGGGA TTTTTTGTCGGCGGT TERM 69 102158 - 102140 - g 71 -9.6 -3.73068 | CCTCGAACTGAAGAA CACCATCA ACA CGATGGTG GATCAGTTGCGCTCG TERM 70 106294 - 106318 + G 71 -7.7 -4.11484 | opp_overlap 106294, overlap 106297 GCAGCGACGAGATGA GCGCCGCGCTG TCG CATCGCGGTAC TTTTGCACCCTTGCC Bphy_5629 100866 - 106898 + | GAF sensor hybrid histidine kinase TERM 71 107368 - 107404 + G 73 -5.6 -4.36914 | gap 1, overlap 107369 TTCGGGCGGAAGCCG GCCGCGCTGCCGCCGAG CAGG CGCGGCAAC-GCGCGGA TTTTCTGGCGGCGGC Bphy_5630 106908 - 109052 + | histidine kinase TERM 72 109126 - 109083 - T 88 -15.2 -3.53012 | overlap 109065 109062 109084 TTTGCGGTGCGCAAA CCGGCAAGGGCAAGCGATGC AATC GCGCCGCTCGCCCTTGCCCT GTCGCCCGGGCGTCG TERM 73 109125 - 109084 - T 100 -18.7 -2.71712 | overlap 109065 109062 109083 TTGCGGTGCGCAAAC CGGCAAGGGCAAGCGATGC AATC GCGCCGCTCGCCCTTGCCC TGTCGCCCGGGCGTC Bphy_5631 109445 - 109143 - | hypothetical protein TERM 74 109211 - 109227 + g 74 -11.5 -3.6502 | TCAACGCTTCGTCTT CCGTGCC GAA GGCGCGG TTTCCCTCCGCGATG TERM 75 109668 - 109689 + r 91 -4.4 -5.54338 | overlap 109658 GAAGCTCAGTTCCTT GCTGATTC GCTCCA GGATCGGC TTTTTCTTTTCGTTG Bphy_5632 110252 - 109644 - | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit TERM 76 109983 - 109994 + g 75 -4.4 -4.66163 | opp_overlap 109983 CGTCTGTTCAATGAA TTCG CGCT CGAA TTTTTCCATGCGCAT TERM 77 110097 - 110087 - G 74 -2.4 -4.72272 | GGCCCGCATGAAAAA TGGC GCC GCCT TCCAGATCGACGGGC Bphy_5633 111148 - 110249 - | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit Bphy_5634 111441 - 111689 + | XRE family transcriptional regulator TERM 78 112402 - 112430 + G 83 -15.3 -3.27298 | opp_overlap 112401 112400 CGGCGAGCAGAAAGT GCTGGCCGTCGAA CGC TTCGACCGCCGGC TTCATCCTTCGCGCA TERM 79 112837 - 112857 + G 70 -7.5 -4.03234 | opp_overlap 112819, overlap 112840 CCAGCGCCGCAACTT CAACGCGAT GGC GTCGCGCTG TTTCTATGGCGCCGA Bphy_5635 111692 - 113035 + | HipA domain-containing protein Bphy_5636 113172 - 114086 + | LysR family transcriptional regulator Bphy_5637 114220 - 115548 + | sodium:dicarboxylate symporter Bphy_5638 115545 - 117044 + | aspartate racemase Bphy_5639 117087 - 118526 + | aspartate ammonia-lyase Bphy_5640 118645 - 118998 + | transport-associated TERM 80 119067 - 119029 - T 90 -16.8 -3.33261 | opp_overlap 119036, overlap 119030 GCTGAATCGGCATAA CTGAGCAGGCGCGCGT ACCGAAA ACGCGCGCCTGTTCAA CCCCTTCCCGTCATG TERM 81 119066 - 119030 - T 95 -18.1 -2.59742 | opp_overlap 119036, overlap 119029 CTGAATCGGCATAAC TGAGCAGGCGCGCGT ACCGAAA ACGCGCGCCTGTTCA ACCCCTTCCCGTCAT TERM 82 119036 - 119060 + T 83 -14.3 -3.03159 | opp_overlap 119030 119029 CGGCATAACTGAGCA GGCGCGCGT ACCGAAA ACGCGCGCC TGTTCAACCCCTTCC Bphy_5641 120349 - 119078 - | hypothetical protein Bphy_5642 121430 - 120363 - | FAD linked oxidase domain-containing protein Bphy_5643 122929 - 121430 - | glycolate oxidase, subunit GlcD TERM 83 121688 - 121708 + g 83 -14.7 -3.27525 | overlap 121663 CAGTTCGAGGATCTT CGCGCCGAG CGT TTCGGCGCG TTCCATTTCGCCGGG TERM 84 122181 - 122191 + g 70 -2.4 -4.60487 | overlap 122179 ATGATCTGCGCGACG GCCG CGC CCGC TTTTTCGACGTCGTC TERM 85 123507 - 123544 + G 72 -13.4 -3.10715 | gap 1 ATGCTCGAAGCGGAA TCGGCGCGCCTCGCCGC ATTGC GCGGC-ACGCCCGCCGA TTACATGATGATCAC Bphy_5644 123150 - 123941 + | GntR domain-containing protein Bphy_5645 124836 - 124015 - | alpha/beta hydrolase fold protein TERM 86 124354 - 124324 - G 77 -14.6 -2.87931 | CGCAGCCTGCACAGA GGGCCGCAGCGCGT CCC ACGCGCCGAGGCCG CCCCAGTAATCGACG Bphy_5646 125979 - 125146 - | methyltransferase type 11 TERM 87 125564 - 125574 + g 74 -2.4 -4.77036 | CAGACACGGGCGAGT TCGG CTG CCGC TTTTTGCTGGTCGGG TERM 88 127354 - 127381 + G 70 -11.3 -3.31322 | ATGCAGCGATCCGCG CGTTCCCGTCG CAGCCC CGGCGGGAATG TTCTACGGCATTAAC Bphy_5647 127025 - 128299 + | hypothetical protein TERM 89 128463 - 128499 + T 90 -17.4 -2.94099 | gap 1 TTCGTGCATGTCGTA TGCCCCGCAGGCCGGAT ATCG ATCCG-CCTTCGGGGCA TGTGTCATCGCAAGC Bphy_5648 129278 - 128598 - | hypothetical protein TERM 90 129379 - 129358 - R 83 -12.3 -3.89524 | gap 1 ATCCGATGTGAGAAA GCGATCCGGC TGG GCCGGA-CGC GTGACGCTGCGTAAC TERM 91 129593 - 129548 - R 93 -8.2 -5.28778 | gap 3, opp_overlap 129555 129560, overlap 129549 AGGATGCAGAAAAAA TGACGCCG--CGCGTCGCGC-CG GGT CGAGCGCACCGCGTGCGGCGCCG AGTCGCGATCTGCTT TERM 92 129592 - 129549 - R 81 -11.7 -3.76182 | gap 3, opp_overlap 129555 129560, overlap 129548 GGATGCAGAAAAAAT GACGCCG--CGCGTCGCGC-CG GGT CGAGCGCACCGCGTGCGGCGCC GAGTCGCGATCTGCT Bphy_5649 130139 - 129711 - | hypothetical protein Bphy_5650 130315 - 131181 + | 3-hydroxybutyryl-CoA dehydrogenase Bphy_5651 132059 - 131193 - | GCN5-related N-acetyltransferase TERM 93 134064 - 134082 + G 74 -13.1 -3.21099 | opp_overlap 134063 TCGTGCCGAAGATAT CGCGGGC AAGCC GCCCGCG TTCATCGTCGCGGGG TERM 94 134415 - 134398 - g 84 -12.7 -3.69354 | opp_overlap 134394 134392 134401, overlap 134367 CTCGACAATGCCAAA CACGCGC AACA GCGCGTG GCTGTGCTCTTCATC Bphy_5652 132433 - 135618 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Bphy_5653 135804 - 135983 + | CsbD family protein TERM 95 135974 - 136005 + T 77 -10.8 -3.84961 | gap 1, opp_overlap 135972 135971 AAAGATCAGAAAGTT GGGCCGATAGCGTCG ATT CGTCG-TACCGGCCC TTTCATCATTCCGTC Bphy_5654 137343 - 136033 - | major facilitator transporter TERM 96 137206 - 137167 - G 86 -14.3 -3.73088 | gap 1, opp_overlap 137193 ATAGCCGATGAAGAA CAGCCCGCCGCCAA-GGC CGAAT GCCGTCGGCGACAGGCCG ATTGCCTTGTTCATC Bphy_5655 138537 - 137455 - | tartrate dehydrogenase Bphy_5656 138645 - 139565 + | LysR family transcriptional regulator TERM 97 139689 - 139709 + F 80 -14.7 -2.86271 | overlap 139687 139691 TCAACCCGCCGGTTC CGCGCGCGA CCC TCGCGCGTG TGGTTGTCATCAAGC TERM 98 139691 - 139707 + F 77 -13.7 -2.98072 | overlap 139689 139687 AACCCGCCGGTTCCG CGCGCGA CCC TCGCGCG TGTGGTTGTCATCAA TERM 99 139965 - 139975 + F 71 -6.8 -4.18018 | CCGCTTTGACGACCA GCTG ATC CAGC TTTTCGCTGAGCGCA TERM 100 140224 - 140280 + F 100 -20.2 -3.53012 | opp_overlap 140230, overlap 140225 140227 GCACCGACGAATTTT GGACAACGGCGTCCCCTGGATCTGGT CTCGC ACCCGATTCACGGGACGCCGTAGTCG TTTACAGGCCCGGAA TERM 101 140225 - 140279 + F 100 -23.7 -2.71712 | opp_overlap 140230, overlap 140224 140227 CACCGACGAATTTTG GACAACGGCGTCCCCTGGATCTGGT CTCGC ACCCGATTCACGGGACGCCGTAGTC GTTTACAGGCCCGGA TERM 102 140227 - 140277 + F 100 -20.5 -2.90496 | opp_overlap 140230, overlap 140225 140224 CCGACGAATTTTGGA CAACGGCGTCCCCTGGATCTGGT CTCGC ACCCGATTCACGGGACGCCGTAG TCGTTTACAGGCCCG TERM 103 140274 - 140230 - f 100 -18.6 -3.31501 | opp_overlap 140227 140225 140224 ACGAATTTTGGACAA CGGCGTCCCCTGGATCTGGT CTCGC ACCCGATTCACGGGACGCCG TAGTCGTTTACAGGC Bphy_5658 140298 - 141599 + | major facilitator transporter TERM 104 141888 - 141864 - g 72 -6.4 -4.27316 | gap 1 CGCCTGAACGCAAAA GC-CGTGTCGA TCGA TCGTCACGCGC ACACGGTGTCGACCT TERM 105 144020 - 144008 - g 80 -4.7 -4.74504 | overlap 144009 ATGCGAATGGAAAAA GGCCG TCA CGGAC CCCGAAACGCGCAAG Bphy_5659 141633 - 144197 + | nitrite reductase (NAD(P)H), large subunit TERM 106 144306 - 144348 + G 84 -14.1 -3.59979 | gap 1, opp_overlap 144297 144308 CGAAATCGTGCCGAA CACGGGCGTCTGCGCGCTCG TCAA CG-GCGAGCAGGTGGCCGTG TTTCGCGTCGAAGGC TERM 107 144404 - 144431 + G 86 -14.2 -3.73402 | gap 1, opp_overlap 144393 ACAACTTCGATCCGG CCTCGCAGGCAGC GGT GCTGTC-GCGAGG TTTGATCGGCAGTCT TERM 108 144446 - 144475 + G 73 -14.3 -2.88663 | gap 1 GTTTGATCGGCAGTC TCGGCGAGCGCGTC GTG GTCGCG-TCGCCGA TCTATAAGCATCACT Bphy_5660 144241 - 144588 + | nitrite reductase (NAD(P)H), small subunit TERM 109 147105 - 147131 + G 78 -13.7 -3.18452 | gap 1 GCGGGACTGTTCAGC CGC-GCGGCTCC GGAT GGGGCCGCCGCG TTGCCTTCGGCTGCT Bphy_5661 144621 - 148823 + | molybdopterin oxidoreductase Bphy_5662 148962 - 149423 + | MarR family transcriptional regulator TERM 110 149762 - 149790 + F 75 -5.2 -4.65895 | gap 1, opp_overlap 149746, overlap 149764 GCCGGGTACAGGCGG CATCGATGCCGCC ACGG GGCGGC-TCCAGG TTTTTGCGTCAGCAG TERM 111 149869 - 149847 - f 73 -3.4 -4.72986 | gap 1, opp_overlap 149850 149852, overlap 149849 TAGCCTCACGAAAAA TCCTGCCGC CTTTGC GCGGC-GAA ACGGAGGTATTCATG Bphy_5663 149882 - 150169 + | hypothetical protein Bphy_5664 150288 - 150860 + | hypothetical protein Bphy_5665 150896 - 151195 + | hypothetical protein Bphy_5666 151699 - 151202 - | hypothetical protein TERM 112 152305 - 152285 - H 74 -8.3 -4.18197 | ACCGGCCATCGAAAA GCGATGC CGCCCAC GCATCGC AAATCAAGGAGACAT Bphy_5667 152324 - 153688 + | citrate carrier protein Bphy_5668 153762 - 155633 + | integral membrane sensor signal transduction histidine kinase TERM 113 155694 - 155721 + G 87 -14.8 -3.64703 | overlap 155695 CGTGGAGCAGGCCGT GGCGCTGGCGGG TTTC CCCGTCAGCGCG TTTGCGTCGGCGGCG TERM 114 155695 - 155720 + G 89 -18.3 -2.78679 | overlap 155694 GTGGAGCAGGCCGTG GCGCTGGCGGG TTTC CCCGTCAGCGC GTTTGCGTCGGCGGC Bphy_5669 155623 - 156987 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 115 157250 - 157297 + T 81 -8.4 -4.26076 | gap 1, opp_overlap 157243 157254, overlap 157252 CTATCACACGGTGAA TGCACGCTGCGCGCTGCATGCGC CGC GCGGAT-CAGTGCGTGACGTGTG TTTTCGTCGCAATCA TERM 116 157252 - 157295 + T 78 -11 -3.7331 | gap 1, opp_overlap 157243 157254, overlap 157250 ATCACACGGTGAATG CACGCTGCGCGCTGCATGCGC CGC GCGGAT-CAGTGCGTGACGTG TGTTTTCGTCGCAAT Bphy_5670 158870 - 157281 - | diguanylate phosphodiesterase TERM 117 158222 - 158193 - G 70 -6.3 -4.21908 | gap 1, opp_overlap 158193, overlap 158164 GACGACGATCGAAAA GGCCCA-GCGCGCC GAA GACGCACGCGTGCC TTTCCACTTGGCGGC TERM 118 159470 - 159498 + r 78 -3.7 -4.98255 | overlap 159471 TTTCATTCGCCTTAA GCGCGTGTGAGGG AGA CCTTTATTCGCGA TTTTTCTAATTAAAA TERM 119 159691 - 159674 - R 72 -6.2 -4.26076 | overlap 159651 159675 159686 TGACTTCGAGCAAAA CCGCGC AGACAA GCGCGA CGGTGCCGGCGTCGC TERM 120 160423 - 160385 - R 75 -11.7 -3.21924 | gap 2, opp_overlap 160382 160396 160398, overlap 160383 TGACGTTCGAGAAGA CGCCGCCGATG--CCGCAG TAT CTGCTGTTCTTCGGCGGCG GCATGTTCGATACGC TERM 121 161440 - 161395 - R 81 -13.2 -3.57144 | TGTCGGACGCGCAAA CTCAGGTGCGGGTCAACGGC TGCTCG GCCGTCGTCGCGGACCCGAG CGGACTCGACTATTA TERM 122 161754 - 161790 + r 86 -14.5 -3.24235 | gap 1, overlap 161752 GCTAAGTCTGAATGT GTCGCGCGCTTCC-CC AGCACG GGCGGGAGTGCGCGAC TGTTCCTATATGTGC TERM 123 162082 - 162049 - R 100 -25.5 -4.58213 | opp_overlap 162052 TAACGAATCAGAAAA CAATAGCGCCGCTGC GAAC GCAGCGGCGCTATTG TTGCGCTTCGGATTG TERM 124 162052 - 162079 + r 100 -21.4 -3.68222 | opp_overlap 162049 CGAATCAGAAAACAA TAGCGCCGCTGC GAAC GCAGCGGCGCTA TTGTTGCGCTTCGGA Bphy_5672 162958 - 162131 - | hypothetical protein Bphy_5673 164587 - 163754 - | NAD-dependent epimerase/dehydratase TERM 125 164850 - 164860 + G 80 -8.2 -4.3739 | opp_overlap 164844 164842 164840 CCAAATACATCAACG GCGC GCA GCGC TTTTCTCCCGCCGTC Bphy_5674 164717 - 165760 + | LacI family transcription regulator Bphy_5675 167111 - 165822 - | major facilitator transporter TERM 126 167083 - 167045 - G 79 -3.7 -4.86731 | gap 1, overlap 167049 CGGTCGCAAAGAAAA GCAGCGCACAGACGGTCC AGCG GAAGCGGCTG-GCGGCGC GTACGACGCCGACGA Bphy_5676 167439 - 167768 + | hypothetical protein TERM 127 167847 - 167825 - T 93 -11.3 -4.6644 | gap 1, overlap 167828 AAGACACTCGAAAAA GCAGCCGGTC TTGC GACCGGC-GC AAAGCTCACCTCGGA TERM 128 167845 - 167828 - T 79 -12.7 -3.25567 | overlap 167825 ACACTCGAAAAAGCA GCCGGTC TTGC GACCGGC GCAAAGCTCACCTCG Bphy_5677 168056 - 167898 - | hypothetical protein TERM 129 168129 - 168100 - R 78 -8.6 -4.1822 | gap 1, overlap 168103 GCGCACTGGAAGAAA CG-ACCGCGCCGA GCTTG TCGACACGGTGCG GCAGATGAGAAATGC Bphy_5678 168424 - 168176 - | hypothetical protein Bphy_5679 171067 - 168530 - | multi-sensor hybrid histidine kinase TERM 130 171225 - 171201 - R 87 -15.7 -2.89742 | TTCAACGGTTATACA CGCTTGCGCGG CGG CCGCTCAAGCG CGCGATATAGCGCTA Bphy_5680 172344 - 171403 - | LysR family transcriptional regulator TERM 131 171619 - 171635 + g 71 -9.3 -3.81258 | opp_overlap 171588, overlap 171631 GCCCAGGCTTTCGAG CGCCGCG TCG CGCAGCG TTTCGCTGTTGTTGG Bphy_5681 172456 - 173967 + | methylmalonate-semialdehyde dehydrogenase TERM 132 173993 - 174016 + F 80 -9.6 -4.24002 | opp_overlap 173993 ATTAACTGGGAGAAA CGCAGTCTTT TACG AAGGGCTGCG TTTTCGCGTTTGGCG Bphy_5682 174229 - 174426 + | hypothetical protein TERM 133 174437 - 174413 - T 71 -12.1 -3.01712 | overlap 174432 CCGCTGTCGTGAATA GCCTGCTCGAT TGA ACCGAGCCGGC AAAAAGACATTGCTG TERM 134 174482 - 174443 - T 86 -8.7 -4.58395 | gap 1, opp_overlap 174448, overlap 174432 174445 174447 174448 174462 CCGAGCCGGCAAAAA GACATTGCTGGCCGCAAT ACAGA ATTGCAGCCAGCATT-CC TGCAGTAAAGCGCGG TERM 135 174481 - 174445 - T 77 -10.2 -3.90762 | opp_overlap 174448, overlap 174432 174443 174447 174448 174462 GAGCCGGCAAAAAGA CATTGCTGGCCGCAAT ACAGA ATTGCAGCCAGCATTC CTGCAGTAAAGCGCG TERM 136 174479 - 174447 - T 81 -12.8 -3.53855 | opp_overlap 174448, overlap 174432 174445 174443 174448 174462 GCCGGCAAAAAGACA TTGCTGGCCGCAAT ACAGA ATTGCAGCCAGCAT TCCTGCAGTAAAGCG TERM 137 174448 - 174478 + T 83 -14.1 -3.16564 | opp_overlap 174432 174447 174445 174443 174448 174462 CCGGCAAAAAGACAT TGCTGGCCGCAAT ACAGA ATTGCAGCCAGCA TTCCTGCAGTAAAGC TERM 138 174478 - 174448 - T 86 -16.3 -2.71831 | opp_overlap 174448, overlap 174432 174447 174445 174443 174462 CCGGCAAAAAGACAT TGCTGGCCGCAAT ACAGA ATTGCAGCCAGCA TTCCTGCAGTAAAGC Bphy_5683 174925 - 174500 - | OsmC family protein Bphy_5684 175209 - 174973 - | 4-oxalocrotonate tautomerase TERM 139 175263 - 175242 - H 74 -13.7 -2.56914 | opp_overlap 175242, overlap 175238 TAGTTGAGGAATGGA GCGGCGCTC ACCA GAACGCCGC TGTGGTGGAAGCTTT TERM 140 176454 - 176435 - g 86 -15 -3.52475 | opp_overlap 176427 176422 176446 TGCAAGACATCAGAA GCCAGGCG TTTG CGCCTGGC TCGAAGGTGCTGTTC Bphy_5685 175507 - 176520 + | 1-aminocyclopropane-1-carboxylate deaminase Bphy_5686 177120 - 176560 - | redoxin domain-containing protein TERM 141 177490 - 177515 + H 72 -9 -3.83998 | GGGGGTGACTCGCAC GGCATTGCGC CGGTGA GCGCGATGTC TTTGGTGTACGATGA TERM 142 177683 - 177726 + G 78 -13 -3.54129 | TTCAGTCCAATGTGA CAGCGCGAATCCGCGCTCTC GAAC GGGAGATCGGCGTCGCGCTG TTTCAACGGCATGTG Bphy_5687 177586 - 178473 + | LysR family transcriptional regulator Bphy_5688 179452 - 178505 - | LysR family transcriptional regulator TERM 143 178556 - 178535 - G 70 -13.7 -2.63382 | overlap 178534 CTCCATATCGAGAAG CGGCGCACG GCGT CGTGCGCCA TTGACGCGAAAGAAA Bphy_5689 180148 - 179603 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 144 180596 - 180564 - g 95 -13.4 -4.25104 | gap 2 GGCTGCGCAGGAAAA CGCCGCAGCTGCGCCC GCT GCGCGC-GC-GCGGCG CGATCACGACGAGCA Bphy_5690 180358 - 181284 + | type IV pilus assembly PilZ Bphy_5691 181520 - 181903 + | response regulator receiver protein TERM 145 182171 - 182196 + G 70 -5.3 -4.39414 | gap 1, overlap 182174 182185 TCCGTCAGGGCGCAG GCATCCCGTCGC CTC GCGACGCGC-GC TTTCTCTTTGCTCTT TERM 146 182347 - 182376 + G 74 -12.9 -3.24747 | gap 1, overlap 182348 ACGATCGCGACCGCC TGCG-CGAGCGTCG TGC TGACGCTCGTCGCG TTCATGATGTCGCAC TERM 147 182348 - 182375 + G 70 -14.2 -2.54634 | gap 1, overlap 182347 CGATCGCGACCGCCT GCG-CGAGCGTCG TGC TGACGCTCGTCGC GTTCATGATGTCGCA TERM 148 183938 - 183914 - g 70 -14.3 -2.63079 | overlap 183911 183910 TCGTGAGAGAATCGA TCGAGCTCGTG CGG CGCGAGCTCGA CGCTGCAAGGGTCGA Bphy_5692 182149 - 184350 + | multi-sensor signal transduction histidine kinase Bphy_5693 184340 - 185014 + | two component LuxR family transcriptional regulator Bphy_5694 185371 - 186330 + | AraC family transcriptional regulator TERM 149 186346 - 186311 - f 74 -12.6 -2.90194 | gap 1, opp_overlap 186318, overlap 186314 186318 ACCGCTGGAAGGAGA TGACGAACGGCGCGCGC TGA GCA-GCGCCGTTCATCC GACAGTCTAGAAGCA TERM 150 186343 - 186314 - f 71 -12.9 -2.69964 | gap 1, opp_overlap 186318, overlap 186311 186318 GCTGGAAGGAGATGA CGAACGGCGCGCGC TGA GCA-GCGCCGTTCA TCCGACAGTCTAGAA Bphy_5695 186398 - 186784 + | hypothetical protein TERM 151 186883 - 186853 - T 100 -18.3 -3.14564 | opp_overlap 186846 TGAGGCTCCGACGAA TCTCTCGCGCGGC ATGTG GCCGCGCGAGAGG CGGCCGTTACTCGCC Bphy_5696 187879 - 186890 - | cytochrome d ubiquinol oxidase, subunit II Bphy_5697 189313 - 187910 - | cytochrome bd ubiquinol oxidase subunit I Bphy_5698 191663 - 189306 - | oxidoreductase alpha (molybdopterin) subunit TERM 152 189589 - 189605 + g 75 -4.3 -4.67904 | overlap 189591 AGGTCGACGCGCTCG CCCGGAT GCA GTCCGCG TTTTTGCAGTTCGTG Bphy_5699 191805 - 192014 + | hypothetical protein TERM 153 192195 - 192219 + G 77 -8.5 -4.2679 | opp_overlap 192165 192189, overlap 192189 192216 CTCGAACCACCGATG CGCGATGATGG GAT CGAGCATCGCG TTTTACTGCGCGTTC TERM 154 192490 - 192544 + G 74 -14.9 -2.64616 | gap 1, opp_overlap 192470 192508 192509, overlap 192495 192516 CTCGACGTCGTGTTT GCCGTGCGCGCGCCGAAAG-GCATCG CCGG CGTCGCGCTGTTGCTGCGCGCACGGC TGGTGTCGCTGGGAC Bphy_5700 192085 - 193002 + | ribonuclease BN Bphy_5701 193378 - 193028 - | hypothetical protein Bphy_5702 194340 - 193378 - | LysR family transcriptional regulator TERM 155 194061 - 194094 + g 70 -11.6 -3.35996 | opp_overlap 194055, overlap 194064 CGCAATGAATGCGCA GCGTGCCGCGCGCA CAGGTA TGCGCGTCGCCCGC TTCTGCCTCGGCGTC Bphy_5703 196846 - 194576 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 156 195042 - 195073 + g 79 -10.9 -3.85698 | gap 1 AAGCCGACGCCGTGA TTCGGCTTG-CGCG GCGGA CGCGGCCAGCCGAA TTTCTGCGCGGCAAG Bphy_5704 197337 - 196843 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 157 197191 - 197173 - G 70 -5.9 -4.29396 | AATCAGGCAGGAAAA CGTCGCC TGGCC GTCGACG ATCACCGTGCATGCG Bphy_5705 198635 - 197334 - | gluconate 2-dehydrogenase (acceptor) TERM 158 197682 - 197730 + g 85 -12.5 -4.07568 | gap 3 CGCCGCGGTCATCGG GCCAG-CGCC-TGCCGGTATCGCG CGCG CACGGT-CCGGCGCGGCGACTGGC TTTTGCAGCGACAGG TERM 159 198596 - 198568 - G 80 -15.9 -2.78715 | overlap 198555 AAGCCGGCGACGAGA GCGGCCGCGATCG CGA CGCCCGCGACCGC TAACGCAAGCGGATT Bphy_5706 199897 - 198692 - | monooxygenase FAD-binding TERM 160 200105 - 200070 - g 73 -9.8 -3.87149 | gap 3, opp_overlap 200072 200072 200075, overlap 200071 TTCAGGAAATTTAAA GTCGA-GCGCCGCGGGC GATGT GCCCGCG-CGCATCG-C GCGCAGCAACGTGTT Bphy_5707 199930 - 200196 + | hypothetical protein TERM 161 200468 - 200480 + G 86 -10.5 -4.21607 | opp_overlap 200458 ACTGACGCTGCATCA CGCGC TGC GCGCG TTTCTATTCGCTGCA Bphy_5708 200367 - 201008 + | metal-dependent phosphohydrolase Bphy_5709 201051 - 202793 + | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 162 203087 - 203105 + G 79 -6 -4.67353 | overlap 203089 ACCGGCTTCAAAATT TTCGAATG GAT CGTTCGGA TTTTTCCATCCATGC Bphy_5710 202914 - 203273 + | hypothetical protein TERM 163 203971 - 204017 + G 74 -15.3 -2.62184 | gap 2 TGTGGTCGATGCCGC TGCGCAGCT-CGCACAC-CATCT GCT GGACGCGTGTGCGCAGCTGCGCG TGCTGTCGACGAGCC TERM 164 204644 - 204625 - g 76 -9.2 -4.08216 | GTACGCGCTGCAAAA GCTCGACG ACAA CGGCGAGC GGCGCATGGTTGCGC TERM 165 204932 - 204980 + G 80 -13.6 -3.40403 | gap 1 CGCGATTGCGCGCAT GCGTCGCCGCGCGCGCGG-GTGC GCCT GCTCGCCGCGCTCGGCGCGTCGC TTGTGCTCGCACACG Bphy_5711 203270 - 205246 + | transcriptional regulator Bphy_5712 206199 - 205279 - | LysR family transcriptional regulator TERM 166 205412 - 205397 - G 77 -4.6 -4.69214 | opp_overlap 205405 CACGCAAGAAAGAAA TGCGTG ACGT CGCGCA TGCCGCAGACTTCCT TERM 167 207617 - 207674 + G 70 -11.1 -3.36327 | gap 1, opp_overlap 207635, overlap 207618 CGCCACCGCCGACCG TGCGGCAGCCGTTATCAACGGCGTACGC GCG GCGGCCGCCG-TGCTGACGGTAGGCGCG TTGTGGCTGGCGTCG Bphy_5713 206376 - 208628 + | fusaric acid resistance protein region Bphy_5716 210158 - 209244 - | AraC family transcriptional regulator TERM 168 210573 - 210546 - H 74 -13.4 -2.60244 | gap 1, overlap 210542 GGGCCAATGAACGCA CTCGCGGCGCGCG GCA CGCGCGCC-CGAT CCTCGACCTTCAATC TERM 169 211995 - 211983 - g 72 -3.3 -4.66609 | overlap 211984 TACGCGATGGAAAAA CTGCG CGA CGAAG GCGAGTTGCAGCGCA Bphy_5717 210642 - 213563 + | transcriptional regulator TERM 170 213643 - 213661 + F 77 -12.4 -3.56594 | GGCGCAATTGCGTCC GGCGCACG GCA CGTGTGCC TTTCAGGACGTTTAA Bphy_5718 213820 - 214812 + | alpha/beta hydrolase fold protein TERM 171 214867 - 214892 + F 100 -13.3 -4.81852 | gap 1, opp_overlap 214867 TGCATGCAGTAGAAA GCCGCCCGTGCG CGA TGCA-GGGCGGC TTTTGTTCGTTGTAC TERM 172 214892 - 214867 - f 91 -12.6 -3.97947 | gap 1, opp_overlap 214867 TGCATGCAGTAGAAA GCCGCCCGTGC GCGAT GCA-GGGCGGC TTTTGTTCGTTGTAC TERM 173 215967 - 215985 + G 74 -10.2 -3.81414 | overlap 215965 215974 CGACACCGATGTGCT GCGCACGG ACG CGGTGCGC TTCTTCCTTGCGCGT TERM 174 216970 - 217001 + G 74 -10.9 -3.56643 | gap 2, opp_overlap 216963 216961, overlap 216968 CATCAATACGGCGGG CGCGCGCGCGATGCG CTGA TGC-TCGCGCGC-CG TTTCGGCGATCTCGC TERM 175 217196 - 217222 + G 77 -12.2 -3.64703 | overlap 217197 217199 TCGATCACGGCATCG TCGCGCGCGCGA CGC TTGCGCGCGTGC TTTGGGTGCAGGGGC TERM 176 217197 - 217221 + G 80 -15.7 -2.78679 | overlap 217196 217199 CGATCACGGCATCGT CGCGCGCGCGA CGC TTGCGCGCGTG CTTTGGGTGCAGGGG TERM 177 217199 - 217219 + G 79 -14.7 -2.94144 | overlap 217197 217196 ATCACGGCATCGTCG CGCGCGCGA CGC TTGCGCGCG TGCTTTGGGTGCAGG Bphy_5719 214957 - 217857 + | transcriptional regulator TERM 178 218627 - 218596 - g 80 -15.2 -3.14132 | CGCCGTGCCGATGAA CTCGCTGCAGTTCA TGTG CGAACTGCAGCGCG ACTGGGCCCGCAGCG Bphy_5720 218114 - 218749 + | isochorismatase hydrolase TERM 179 218777 - 218823 + F 74 -11.6 -3.53224 | gap 2, overlap 218772 218781 218781 GCCTGTAGCACGTCC CGTAGTGCCTCACGCGCGGCGC TTGTT GCGCCGCGCGTCGGGAA--ACG TTTGACCCCAGCCTG TERM 180 218781 - 218822 + F 80 -14.4 -2.71791 | gap 1, overlap 218772 218777 218781 GTAGCACGTCCCGTA G-TGCCTCACGCGCGGCGC TTGTT GCGCCGCGCGTCGGGAAAC GTTTGACCCCAGCCT TERM 181 219354 - 219328 - g 77 -14.5 -2.79183 | gap 1, opp_overlap 219336, overlap 219345 TGCATCTTTACGATA GC-GCGCTGCTG AACG CAGCAGCGCTGC GTGCCGTCGGTTACG Bphy_5721 218862 - 220742 + | amidohydrolase 3 Bphy_5722 220757 - 221170 + | DoxX family protein Bphy_5723 221164 - 221826 + | metal-dependent phosphohydrolase TERM 182 221922 - 221891 - f 71 -7.8 -3.99779 | overlap 221892 CAAAACCGAAGCAAA GCGCGCACGCCGGA TCGA TGCGGCGCGCGAGG AGTGAGCCATGTCAT Bphy_5724 221931 - 222167 + | hypothetical protein TERM 183 222760 - 222711 - g 72 -12.7 -3.05844 | gap 1, opp_overlap 222741 222747 CCGGCGACGCGAAGA CTCGACATGCGGC-GCGCACGCGC CTC GTGCGCACGCTGCCGCCTGTCGCC GGCTTCGCGGTCGGC Bphy_5725 222149 - 222892 + | hypothetical protein TERM 184 223375 - 223342 - g 84 -15.1 -3.39803 | opp_overlap 223330, overlap 223343 CACGGACATCGACAA GGCCGTGCGCGCCGC GCGC GCGGCGGGCGCGGAC GTGATCGTCGACACT TERM 185 223365 - 223343 - g 77 -16.2 -2.6356 | opp_overlap 223330, overlap 223342 ACGGACATCGACAAG GCCGTGCGCG CCG CGCGCGCGGC GGGCGCGGACGTGAT Bphy_5726 222947 - 223882 + | hypothetical protein TERM 186 224293 - 224310 + G 70 -2.5 -4.59773 | overlap 224294 GCCGATGCGCGCGTT GGCCAGC ACGT GCAGGCG TTTTTCCAGCTCGAG Bphy_5727 223909 - 225351 + | hypothetical protein TERM 187 225447 - 225463 + T 80 -5.1 -4.88228 | TCGGGCTTCATGCGT TGCCC CTGTGCC GGGCA TTTTTACTGTTGCAT Bphy_5728 226224 - 225973 - | hypothetical protein Bphy_5729 228015 - 226231 - | polypeptide-transport-associated domain-containing protein TERM 188 227901 - 227942 + g 76 -9.9 -4.183 | overlap 227896 GCTGGTTCTGTTCGG CGTTCGCGCGTGCGGCCGC TGCT GCGTCTGCGGGCGCCGGCG TTTGTTGCGCGTTAG TERM 189 228091 - 228081 - R 80 -2.4 -5.24531 | ACGCGGCACAAAAAA CGCG GCT CGCC TTACCCTCGATGCGC Bphy_5730 228457 - 228092 - | lipoprotein Bphy_5731 228684 - 228478 - | hypothetical protein Bphy_5732 237826 - 229478 - | filamentous haemagglutinin outer membrane protein TERM 190 231466 - 231479 + g 75 -3.8 -4.60041 | overlap 231463 TGATCGCATTGTTCG CGTC CAGCGT GACG TTTTTCCCGGTCACT TERM 191 231532 - 231542 + g 72 -8.2 -4.05747 | overlap 231518 CGCCCGTGCCCGCCT GGGC GTT GCCC TTTGTATCCGGTATG Bphy_5733 239341 - 238013 - | transposase IS4 family protein TERM 192 238068 - 238097 + g 100 -17.1 -4.4078 | overlap 238069 TTGGGGCGGGATTTG ACGACCCGGTCGC ATGC GCGGCCGGGTCGC TTTTCATTGGGAAGA TERM 193 238069 - 238096 + g 100 -20.6 -3.24146 | overlap 238068 TGGGGCGGGATTTGA CGACCCGGTCGC ATGC GCGGCCGGGTCG CTTTTCATTGGGAAG TERM 194 239281 - 239300 + g 71 -12.8 -3.04144 | GCAGATGCTCAGCCA GCCGGCTG AGGT CGGCCGGC TGTTGCGCATCGAGC TERM 195 239431 - 239405 - R 100 -15.3 -5.74684 | GAACAAAAACAAAAA TGCCGTTCAGT GCCTA ACTGAACGGCA TTACCGCTCGTGGCG TERM 196 239748 - 239728 - R 72 -6.7 -4.40173 | opp_overlap 239735 ACCAGAAACCCAAAA CGTCAGCCG GTC CGGCCATCG GCGCGTCCCGTTTTT TERM 197 239735 - 239758 + r 83 -4.4 -5.07567 | gap 1, opp_overlap 239728 ACCCAAAACGTCAGC CGGTCCG-GCC ATC GGCGCGTCCCG TTTTTTGCACTCTGG TERM 198 239890 - 239862 - R 100 -15.3 -4.85599 | opp_overlap 239865, overlap 239863 TGCACCGCAGAAAAA CGAGCGCCCCG TTGAAGG CGGGGCGCTCA CTTCAGGCTGCTGCA TERM 199 239889 - 239863 - R 91 -16.6 -3.50877 | opp_overlap 239865, overlap 239862 GCACCGCAGAAAAAC GAGCGCCCCG TTGAAGG CGGGGCGCTC ACTTCAGGCTGCTGC TERM 200 239865 - 239887 + r 78 -14.8 -2.53382 | opp_overlap 239863 239862 ACCGCAGAAAAACGA GCGCCCCGTT GAA GGCGGGGCGC TCACTTCAGGCTGCT Bphy_5734 240452 - 239913 - | hypothetical protein TERM 201 240231 - 240261 + g 79 -14.7 -3.01712 | gap 1 TTCCTCCACGTCATG GCGCGGG-TCCGCG TGGA CGCGTAACCCGCGC TGTTCCCCCCGAACG Bphy_5735 241037 - 240471 - | hypothetical protein TERM 202 241441 - 241451 + r 79 -6.8 -4.65916 | ACTATGGACTTCCAC CCAG GCA CTGG TTTTCTTCGGGTCAC TERM 203 241773 - 241755 - R 88 -14.6 -3.59979 | CGCCGTCACCTGAAA TCCGAGCG TGA CGCTCGGA GCGGGAAAACCCGAC Bphy_5738 242211 - 241894 - | hypothetical protein Bphy_5739 243081 - 242248 - | hypothetical protein Bphy_5740 244476 - 243406 - | integrase, catalytic region TERM 204 244425 - 244381 - G 70 -11.4 -3.40163 | GAGCAGCAAGATCAA CCGCGCACGCCTCAC-CTGGCC AAC GGCCATCGTGCGGC-TGCGCTG CATCGACATCAGCTC Bphy_5741 244936 - 244652 - | PAAR repeat-containing protein Bphy_5742 245821 - 245003 - | hypothetical protein Bphy_5743 247544 - 245829 - | peptidoglycan-binding LysM Bphy_5744 250334 - 247572 - | type VI secretion system Vgr family protein TERM 205 249071 - 249092 + g 93 -6.5 -5.11033 | gap 1, opp_overlap 249069, overlap 249089 AGCCCGTCACAATCG CCAC-CTCGC CGT GCGAGCGCGG TTTTTTCGCCTTCTG Bphy_5745 251039 - 250719 - | hypothetical protein TERM 206 251406 - 251432 + H 74 -11 -3.57561 | opp_overlap 251398 AAACCCACCCGGTCA CTTGCTTAACGT TAA GTGTTAAGCAAG TTTACGCGCTTAAAG TERM 207 252353 - 252305 - g 85 -5.1 -5.08088 | opp_overlap 252307, overlap 252306 252307 AATTTCCAAGAAAAA CCCGACGATAGCGGACTTCAATG AAG CACTGAAGGCTGCAAGCGTCGTT GATATCGCACAATGG TERM 208 252307 - 252351 + G 71 -12.1 -3.25942 | opp_overlap 252306 252305 252307 TTTCCAAGAAAAACC CGACGATAGCGGACTTCAATG AAG CACTGAAGGCTGCAAGCGTCG TTGATATCGCACAAT Bphy_5746 251685 - 252494 + | hypothetical protein TERM 209 252602 - 252655 + T 73 -12.3 -3.14564 | gap 1, overlap 252613 TTTCCGGCGCCGGGA CGTGGCACGCTGCGC-CGCGGGCGGT TTA GCCGCTTCCGCGCGCGGTGTGTCGAG TTCGTGAACCAGTGC TERM 210 254181 - 254198 + T 75 -9.1 -3.97388 | overlap 254182 ATCTGCTTCTCCTTC TGCGCCT GTGC AGGCGCG TTTGTCATGCAATGT Bphy_5749 254553 - 254203 - | hypothetical protein Bphy_5750 255032 - 254550 - | hypothetical protein TERM 211 255095 - 255140 + r 100 -13.3 -4.42386 | opp_overlap 255095 255098, overlap 255098 255100 255111 CGTCCCTCACAAAAA TCACTCTCACAAACCCCCCCT CCGT AGGAGGGGTGTTTGTGAGTGA TTTTGTGAGTGACAG TERM 212 255140 - 255095 - R 100 -15.5 -4.82901 | opp_overlap 255095 255098 255100 255111, overlap 255098 CGTCCCTCACAAAAA TCACTCTCACAAACCCCCCCT CCGT AGGAGGGGTGTTTGTGAGTGA TTTTGTGAGTGACAG TERM 213 255098 - 255139 + r 90 -16.7 -3.2511 | gap 1, opp_overlap 255098 255095, overlap 255095 255100 255111 CCCTCACAAAAATCA CTCTCACAAACCCCCCCTCC GTA GGAGGGGTG-TTTGTGAGTG ATTTTGTGAGTGACA TERM 214 255139 - 255098 - R 90 -16.7 -3.31915 | gap 1, opp_overlap 255095 255098 255100 255111, overlap 255095 CCCTCACAAAAATCA CTCTCACAAACCCCCCCTCC GTA GGAGGGGTG-TTTGTGAGTG ATTTTGTGAGTGACA TERM 215 255100 - 255137 + r 93 -17.9 -3.18788 | gap 1, opp_overlap 255098 255095, overlap 255098 255095 255111 CTCACAAAAATCACT CTCACAAACCCCCCCTCC GTA GGAGGGGTG-TTTGTGAG TGATTTTGTGAGTGA TERM 216 255111 - 255127 + r 83 -13.7 -3.56226 | opp_overlap 255098 255095, overlap 255100 255098 255095 CACTCTCACAAACCC CCCCTCC GTA GGAGGGG TGTTTGTGAGTGATT Bphy_5751 256982 - 255273 - | putative helicase TERM 217 255750 - 255777 + g 70 -4.7 -4.40037 | opp_overlap 255750 AAAATCGAGCAGGAA CGGCAGGTTCG ATGAGC CGCGCATGCCG TTTTCCTGCTTCTTT TERM 218 256174 - 256149 - G 71 -3.9 -4.58395 | gap 1 GTCATGCCCGAAAAA CGACCGGCATTC GGT GAGCG-CGGCCG CCAGGTCGAGCACAA TERM 219 256830 - 256778 - G 100 -14.8 -4.56775 | gap 2 AGCCGTCCGCAAAAA TGCGCTGCACCGCG-ACC-ACCGGCG CAT CGCCGGTCAGCGCGCGGATCGGCGCA AGCAGACACGCTGGG TERM 220 257303 - 257287 - R 90 -10.8 -4.64846 | opp_overlap 257298, overlap 257280 GCAGAAATGAGAAAA GCGCGC TTCTC GCGCGC TCAGCGGGCTTCATT Bphy_5752 257721 - 257482 - | hypothetical protein Bphy_5753 258025 - 257879 - | hypothetical protein Bphy_5754 258214 - 258062 - | hypothetical protein Bphy_5755 258954 - 258271 - | hypothetical protein TERM 221 258944 - 258929 - G 100 -11.8 -4.52142 | opp_overlap 258929 AGCATAAAACAGAAA CCCCGC CGGG GCGGGG TTTGGGACATGGGCA TERM 222 258929 - 258944 + g 75 -11.8 -3.55444 | opp_overlap 258929 AGCATAAAACAGAAA CCCCGC CGGG GCGGGG TTTGGGACATGGGCA Bphy_5756 260237 - 258969 - | integrase family protein TERM 223 258997 - 259012 + g 77 -11.8 -3.56593 | overlap 258992 TTCAGCGGTACGGCC CCGGCC TCGC GGCCGG TTGTGGTTGTGACCT TERM 224 259015 - 259028 + g 74 -2.3 -4.7871 | GCCTCGCGGCCGGTT GTGGT TGTG ACCTC TTTTTCGTCGTCGTT TERM 225 260593 - 260575 - R 90 -10.2 -4.6951 | opp_overlap 260577, overlap 260577 AGTAGGCAAAAGAAA GCCGCTCG CAC CGAGCGTC TTGACGTCTGGCCAC TERM 226 260969 - 260933 - R 71 -10.2 -3.53091 | gap 1 ATGCGCTCGTCCAAA GCGCTGGCAACGCGC GCATGCTA GCACGTTGCC-GCAC GAAGGACGGGGACGT TERM 227 261154 - 261130 - R 76 -12.8 -3.09327 | overlap 261145 GGATGCCAGCGAACA GCCGGCCAGC GAACA GCCGGCCAGC GAAGAGCCGGCAAAA Bphy_5757 261875 - 261183 - | hypothetical protein Bphy_5758 263150 - 262272 - | IclR family transcriptional regulator TERM 228 263099 - 263122 + g 77 -15.2 -2.7965 | opp_overlap 263093, overlap 263097 263088 CGGACACGAGCGGGG CGGCGGCGCG CTTG CGCGGCGCCG TGGTCTTGGGTTTGT Bphy_5759 264008 - 263238 - | 2-deoxy-D-gluconate 3-dehydrogenase Bphy_5760 264870 - 264034 - | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase TERM 229 265055 - 265035 - H 76 -4.6 -4.78572 | overlap 265036 GCGCAAGTAATAAAA CGGAACAG CGTTC CTGCGCCG ATGCTATAGTCCGCG TERM 230 265221 - 265251 + G 71 -9.6 -3.71527 | overlap 265224 GCTCGGCGCGTGCGT GCACTCGTTCGCGC CTG GCGCGGGCAAGTAC TTTGGATCGTTCACG TERM 231 265623 - 265638 + G 71 -10.4 -3.61517 | overlap 265633 CATGATCATTCTCGG CGCGAC GGGT GTCGCG TTCTTCGAGCCGCGT Bphy_5761 265147 - 266163 + | 2-keto-3-deoxygluconate transporter TERM 232 266218 - 266184 - T 90 -15.7 -3.51032 | opp_overlap 266185, overlap 266164 266185 ACGCTGCAACGAGAA GCGGCGCGCACGG GTACAGTTG CCGTGCGCGCCGT TGTCACGTTAGCCCT TERM 233 266217 - 266185 - T 95 -19.2 -2.70298 | opp_overlap 266185, overlap 266164 266184 CGCTGCAACGAGAAG CGGCGCGCACGG GTACAGTTG CCGTGCGCGCCG TTGTCACGTTAGCCC TERM 234 266185 - 266217 + T 100 -19.2 -3.36492 | opp_overlap 266164 266185 266184 CGCTGCAACGAGAAG CGGCGCGCACGG GTACAGTTG CCGTGCGCGCCG TTGTCACGTTAGCCC Bphy_5762 267471 - 266257 - | major facilitator transporter Bphy_5763 268198 - 267542 - | DSBA oxidoreductase TERM 235 268490 - 268524 + G 71 -10.6 -3.56092 | overlap 268513 GCCGCGCAAGGTCAG TCTGACCGACGCGGGC ATG GCCTACGTCGAGCAGA TTTCGAAAGTGCTCG TERM 236 269139 - 269129 - g 72 -8.2 -4.09685 | opp_overlap 269129 269119 CGTGACGCCGCAAAA CGGC GAA GCCG TCGTGTATGCGGCGT Bphy_5764 268320 - 269270 + | LysR family transcriptional regulator Bphy_5765 270221 - 269265 - | LysR family transcriptional regulator TERM 237 270510 - 270495 - g 77 -4.6 -4.66609 | overlap 270496 GAGCTGATGGAAAAA TGCCGT CCCG ACGGCG TGGTGCTCGCGACGC TERM 238 270871 - 270902 + G 74 -10.9 -3.65902 | gap 1 TCGGCAATCTGCGTT CGC-TGTGCGGCGA GATCG TCGCCGTGCACGCG TTTGCGTCGAATGCG Bphy_5766 270312 - 271373 + | oxidoreductase domain-containing protein Bphy_5767 271396 - 271833 + | 3-dehydroquinate dehydratase, type II Bphy_5768 271971 - 272132 + | hypothetical protein TERM 239 272143 - 272173 + F 72 -9.7 -3.75153 | overlap 272144 GCTGACGCAGCGCCT GGGTGAGGCGGAA GAATA TTCCGCCTTGCCG TTTCCATTGGCCGGC TERM 240 272144 - 272172 + F 73 -13.2 -2.84878 | overlap 272143 CTGACGCAGCGCCTG GGTGAGGCGGAA GAATA TTCCGCCTTGCC GTTTCCATTGGCCGG TERM 241 272424 - 272441 + F 76 -3.3 -5.00616 | ATTGGGGTTGAAAGG GGGACGC ATGT GCGTGTC TTTTTTACCGGCCCC Bphy_5769 272620 - 274533 + | ATPase central domain-containing protein TERM 242 274523 - 274541 + F 73 -13.1 -2.71712 | overlap 274522 TGGCGGAGCAGCCCG CGGCGGC ATAGA GCCGCCG ATTTCGCGCACAACG Bphy_5770 274656 - 275840 + | acyltransferase 3 Bphy_5771 275969 - 276649 + | hypothetical protein TERM 243 277006 - 276958 - f 80 -10.2 -4.04295 | gap 1, opp_overlap 276965 CGAATGACAAGGAAA GC-CGGAATGCCTCGATGCCGAC GTCA GACGGCAACGGGAGATTCCGTGC ATCTGAGATATGAGG TERM 244 278027 - 278000 - g 84 -14.2 -3.65522 | GATGGAGCGCAACAA CACGATGCCGAA GATC TTCGGCAGCGTG CATCCGCTGTACGGC Bphy_5772 277029 - 278660 + | amino acid permease-associated region TERM 245 278779 - 278803 + F 100 -15.8 -3.89215 | opp_overlap 278779 CGCCTCACCGTGAAA GCGGATCACG CATGC CGTGATCCGC TTTGCGTTTGTCGAG TERM 246 278803 - 278779 - f 90 -15.8 -3.57144 | opp_overlap 278779 CGCCTCACCGTGAAA GCGGATCACG CATGC CGTGATCCGC TTTGCGTTTGTCGAG Bphy_5773 278876 - 279790 + | glutaminase Bphy_5774 280798 - 279812 - | zinc-binding alcohol dehydrogenase family protein Bphy_5775 281148 - 280840 - | hypothetical protein TERM 247 281525 - 281549 + H 100 -14.2 -4.00532 | overlap 281545 GGTCGATCGCTTTAT CCGGGCGCGC GAAAG GCGCGCGCGG TTTCGTGTTTCGCCC TERM 248 281734 - 281750 + G 71 -10.8 -3.61398 | overlap 281724 TGCACTGCCGTGACA GCGGCG TGTCT CGCCGC TTATTCCACCACCGA Bphy_5776 281686 - 283209 + | PDZ/DHR/GLGF domain-containing protein TERM 249 283405 - 283383 - g 79 -11.2 -3.85909 | overlap 283386 TTATGGAAAGTGAAA GCACGTCGCG TCG CGAGACGCGC GCCGGCAGCGCATTC TERM 250 283996 - 284017 + G 90 -15.9 -3.8062 | CGCTCTGCCGCGCGC TGCGAGCGC CGTC GCGCTCGCA TTGTTCTGCGCGTTG TERM 251 284221 - 284240 + G 84 -7 -4.74504 | CGGCTATGGCGCGGC GCAGGCCG TTCC CGGTCCGC TTTTTACGTTCGCGT Bphy_5777 283370 - 284608 + | chromate transporter Bphy_5778 284751 - 285812 + | cyclic nucleotide-binding protein TERM 252 285904 - 285922 + F 73 -3 -4.84527 | opp_overlap 285905 285906, overlap 285905 285906 CCGATTCGAGAAAAA AGGCCGTT TTA AACGGCAG TTTTTGATCTATAAC TERM 253 285921 - 285905 - f 90 -6.5 -5.26316 | opp_overlap 285904 285905 285906, overlap 285906 CGATTCGAGAAAAAA GGCCGTT TTA AACGGCA GTTTTTGATCTATAA TERM 254 285920 - 285906 - f 75 -10 -3.75067 | opp_overlap 285906 285905 285904, overlap 285905 GATTCGAGAAAAAAG GCCGTT TTA AACGGC AGTTTTTGATCTATA Bphy_5779 286146 - 287930 + | tetratricopeptide TPR_4 Bphy_5780 287978 - 289270 + | phosphoesterase PA-phosphatase related TERM 255 290952 - 290964 + G 86 -9.1 -4.57073 | GCGTTTCGAAGATCC GCGCT ACA AGCGC TTTTTCGGGGGCATG Bphy_5781 289312 - 291558 + | hypothetical protein TERM 256 291608 - 291585 - T 100 -19.6 -4.73388 | opp_overlap 291605 291605 AAGCCGCATGAAAAA GGGCCCGTCG TTGC CGACGGGCCC TCACTGCTCGCGGTG Bphy_5782 291924 - 291652 - | hypothetical protein TERM 257 292686 - 292705 + G 78 -4.2 -4.77173 | gap 1, opp_overlap 292653, overlap 292682 AATCGGCAACGGCAG TGGCGCGGC GCG GCC-CGGCA TTTATTTTCTGGGCG Bphy_5783 292255 - 293628 + | peptidase M14 carboxypeptidase A Bphy_5784 293935 - 294219 + | hypothetical protein Bphy_5785 294906 - 294247 - | TetR family transcriptional regulator TERM 258 294838 - 294866 + g 75 -6.6 -4.4448 | gap 1 CCCGACCGACGCACT CGATGC-CGGGCG TCCG CGCGCGCGCTTCG TTTCTTTGCGGGTTT Bphy_5786 295044 - 295439 + | hypothetical protein TERM 259 296757 - 296777 + G 74 -13.3 -3.28791 | overlap 296769 GCGCACGCTCGTGTT CGTGCGTCA GGC TGACGCGCG TTATCACGCACGCAT TERM 260 297102 - 297113 + G 70 -2.2 -4.64861 | gap 1 CAACGAACTGACGCG CGAGC TGA GC-CG TTTCTTTTACGGCGC Bphy_5787 295690 - 297156 + | putative signal transduction protein TERM 261 297172 - 297211 + T 88 -15.7 -3.07816 | gap 1 GCGCAGATGTCAGCG CGCCGCACGCGTGCCGTG CATGT CGCGGCATGCG-GCAGCG TTCAGTCACTCAGCG Bphy_5788 297904 - 297221 - | HAD family hydrolase Bphy_5789 298110 - 298012 - | hypothetical protein Bphy_5790 298398 - 299198 + | beta-lactamase domain-containing protein Bphy_5791 299211 - 299996 + | short-chain dehydrogenase/reductase SDR TERM 262 300236 - 300215 - g 71 -10.1 -3.62849 | CCGACGAAAGCACAA CGCTCGCCG GCCG CAGCGAACG CACGGACATGCTCAA TERM 263 300700 - 300723 + G 70 -2.2 -4.70659 | opp_overlap 300681, overlap 300704 TTCTCGGGACCCGAC GCGCCGCTCG AAGG CGATCGTGGC TTTTTGCGTGTGAGC Bphy_5792 299986 - 301371 + | MmgE/PrpD family protein Bphy_5793 301400 - 302323 + | 3-hydroxyisobutyrate dehydrogenase Bphy_5794 302354 - 302680 + | NIPSNAP family protein Bphy_5795 302693 - 303580 + | 3-hydroxyisobutyrate dehydrogenase Bphy_5796 303603 - 305033 + | aldehyde dehydrogenase Bphy_5797 305164 - 305559 + | carboxymuconolactone decarboxylase Bphy_5798 305637 - 306986 + | major facilitator transporter Bphy_5799 307018 - 307938 + | 6-phosphogluconate dehydrogenase NAD-binding Bphy_5800 307935 - 308330 + | cupin 2 domain-containing protein Bphy_5801 308393 - 309178 + | carboxymuconolactone decarboxylase Bphy_5802 309272 - 309955 + | GntR family transcriptional regulator TERM 264 310034 - 310059 + F 71 -6.8 -4.21974 | CGCCCGTATCCGGCA CTGTGCCGCT CGACGC AGCAGCGCAG TTTCTTCAATCGTCA Bphy_5803 310523 - 311062 + | cytochrome c class I Bphy_5804 312006 - 311059 - | histone deacetylase superfamily protein Bphy_5805 313275 - 312157 - | AraC family transcriptional regulator Bphy_5806 313522 - 315210 + | AMP-dependent synthetase and ligase TERM 265 315283 - 315241 - f 100 -17 -3.91984 | opp_overlap 315253, overlap 315242 ACAGCCGGGAAACAA TTGCACGCATAGGCGGATGC GGT GCATCCGCTTTTGCGCGCAT CACAATCCGGGGGGC TERM 266 315282 - 315242 - f 100 -20.5 -2.94708 | opp_overlap 315253, overlap 315241 CAGCCGGGAAACAAT TGCACGCATAGGCGGATGC GGT GCATCCGCTTTTGCGCGCA TCACAATCCGGGGGG TERM 267 315253 - 315271 + F 100 -14.6 -4.08767 | opp_overlap 315242 315241 CAATTGCACGCATAG GCGGATGC GGT GCATCCGC TTTTGCGCGCATCAC Bphy_5807 315257 - 315736 + | protein of unknown function DUF395 YeeE/YedE TERM 268 316520 - 316566 + G 73 -12.4 -3.40403 | gap 4, overlap 316520 316544 GGCGTTGCTGATTTT CG-CGCCG-GCGCTGC-TGC-GCA CGT TGCCGCAAGCCGCGCTCGGCGCCG TTGTCGTCGCGGCAG Bphy_5808 315738 - 317231 + | sulphate transporter Bphy_5809 318350 - 317250 - | PAS/PAC sensor signal transduction histidine kinase TERM 269 317304 - 317292 - G 71 -10.5 -3.64103 | opp_overlap 317288 GATCGACATGCGAAA GCCCG CGC CGGGC GAACTGATATACGAC TERM 270 317845 - 317855 + g 81 -4.6 -4.86773 | overlap 317830 317831 TCGTCGTGCAATTCG CGCG CGA TGCG TTTTTGCTCGTTTTC Bphy_5810 318985 - 318608 - | hypothetical protein Bphy_5811 320134 - 319334 - | Crp/FNR family transcriptional regulator TERM 271 319501 - 319457 - G 87 -17.8 -2.88544 | opp_overlap 319425 319499 CTTCATGCCGAGATA GCAGCCGATTTCCTCCCGCG TCATG CGCAGGTGGAATTCGGCGGC GGAAAAACCGCGTGC Bphy_5812 320564 - 320148 - | response regulator receiver protein Bphy_5813 321324 - 320677 - | two component LuxR family transcriptional regulator TERM 272 321467 - 321495 + r 100 -18.1 -3.60296 | GAACGACTTGTCCTC GCTGGGACGGGCG CTC CGCCCGTCTCCGC TTTCGCGTGGCGATC TERM 273 321498 - 321522 + r 71 -11.4 -3.30124 | CGCCCGTCTCCGCTT TCGCGTGGCG ATCGG CGCCACGCCA TTATCCGCGATGCGC Bphy_5814 322478 - 321642 - | UspA domain-containing protein TERM 274 321724 - 321707 - G 72 -8.3 -4.08216 | TGACGCCGCCGAAAA CCCGCTC GCGC GCGCGGG CATGCCCGTACGCGC TERM 275 322140 - 322120 - G 70 -11.2 -3.39895 | GGCGCGACGAACGAA GCAGGATC GTTCG GATCCTGC TGGCCTAGCACCAGC Bphy_5815 323343 - 322504 - | UspA domain-containing protein TERM 276 323390 - 323368 - H 71 -11.9 -2.96711 | TCCAGAATGGACAGA CGCGGGGCG GGCCG CGGCCCGCG ATGAAGTCGAGTCTA TERM 277 323553 - 323567 + H 82 -6.4 -4.72272 | CGTGTGAATTTTCAT TCCTTC CCT GGAGGA TTTTTGATGAAAGCA Bphy_5816 323574 - 324614 + | alcohol dehydrogenase Bphy_5817 324718 - 325245 + | putative flavodoxin Bphy_5818 325306 - 325767 + | UspA domain-containing protein TERM 278 325799 - 325837 + T 90 -16.6 -3.39142 | overlap 325800 325804 AGCGCGACGACTGCC GGGAACGCGCCGCTCGAC CTC GACGGGCGGCGCGTTACA TTAATTACGTATGGG TERM 279 325800 - 325836 + T 100 -20.1 -2.63164 | overlap 325799 325804 GCGCGACGACTGCCG GGAACGCGCCGCTCGAC CTC GACGGGCGGCGCGTTAC ATTAATTACGTATGG TERM 280 325804 - 325832 + T 100 -19.5 -3.24166 | overlap 325800 325799 GACGACTGCCGGGAA CGCGCCGCTCGAC CTC GACGGGCGGCGCG TTACATTAATTACGT Bphy_5819 326570 - 325872 - | putative NADH oxidase (nitroreductase), NoxC-like protein Bphy_5820 327670 - 326714 - | UspA domain-containing protein Bphy_5821 327880 - 328575 + | signal-transduction protein TERM 281 328605 - 328662 + F 80 -10.4 -4.01888 | overlap 328606 CAATGCCTGCCGATC GCCGCGCGGCG-AGGCACACGCGAACGC TTCG GCGT-CGCGCGGACCTTCGTCGCGCGCA TTTCTGCTCTCGCGT TERM 282 328606 - 328661 + F 77 -13.9 -3.00651 | overlap 328605 AATGCCTGCCGATCG CCGCGCGGCG-AGGCACACGCGAACGC TTCG GCGT-CGCGCGGACCTTCGTCGCGCGC ATTTCTGCTCTCGCG Bphy_5822 328864 - 329610 + | short-chain dehydrogenase/reductase SDR TERM 283 329682 - 329658 - T 100 -12.2 -5.26875 | gap 1, opp_overlap 329658 GCTGCAATGAAAAAA CCTCGGC-TCC TGAT GGATGCCGAGG TTTAGTGCTTGCCAC TERM 284 329658 - 329682 + T 83 -12.2 -3.84246 | gap 1, opp_overlap 329658 GCTGCAATGAAAAAA CCTCGGC-TCC TGAT GGATGCCGAGG TTTAGTGCTTGCCAC Bphy_5823 331377 - 329908 - | transcriptional regulator Bphy_5824 331573 - 332490 + | ubiquinol oxidase, subunit II Bphy_5825 332496 - 334496 + | cytochrome o ubiquinol oxidase, subunit I Bphy_5826 334499 - 335113 + | cytochrome o ubiquinol oxidase, subunit III Bphy_5827 335110 - 335487 + | cytochrome o ubiquinol oxidase subunit IV Bphy_5828 335999 - 335583 - | hypothetical protein Bphy_5829 337786 - 335996 - | sulfite reductase (ferredoxin) Bphy_5830 338466 - 338005 - | MEKHLA domain-containing protein TERM 285 339880 - 339899 + H 71 -11.4 -3.2963 | opp_overlap 339873 339878 CGACGGAACGAACGC CGCCCGGA TTTC TTCGGGCG TTATGGCGCCGTGAT Bphy_5832 340417 - 340758 + | hypothetical protein Bphy_5833 342224 - 340755 - | LuxR family transcriptional regulator TERM 286 342498 - 342479 - g 71 -9.2 -3.77832 | opp_overlap 342493 CCTGAAAGGCAAGAA CGTCGTGC TGGT GCACGGCG CGTTCGCCGATGGTT Bphy_5834 342372 - 343151 + | hypothetical protein TERM 287 343201 - 343174 - f 81 -12.6 -3.53012 | opp_overlap 343174 CTGGTCTTTTTGAAA CCGCGACGTGCC GGAA GGTGCGTCGCGG TTTTCGCTTTTGCTG TERM 288 343174 - 343201 + F 100 -17 -4.44277 | opp_overlap 343174 CTGGTCTTTTTGAAA CCGCGACGTGCC GGAA GGTGCGTCGCGG TTTTCGCTTTTGCTG Bphy_5835 343454 - 344452 + | 2-keto-3-deoxygluconate permease TERM 289 344753 - 344811 + G 80 -14.5 -3.14132 | gap 2, overlap 344746 344745 344754 AGGCGCTTGCCGGCA TG-GCGATCGTCGCGC-CCGCGTTTCCCG CCA CGGGACGCACGGTGCGCGACGGCCGCGTG TTCGTGCACGGCGAG TERM 290 344754 - 344809 + G 93 -19.6 -3.13403 | gap 1, overlap 344746 344745 344753 GGCGCTTGCCGGCAT GGCGATCGTCGCGC-CCGCGTTTCCCG CCA CGGGACGCACGGTGCGCGACGGCCGCG TGTTCGTGCACGGCG TERM 291 345047 - 345075 + G 90 -7.4 -4.87665 | gap 1, overlap 345050 CGCTGCGCGCGCTCG CGCGTGCGACGCT GCGT AGCGATGCAC-CG TTTTTCTGGGTCGGC Bphy_5836 344449 - 345708 + | hypothetical protein Bphy_5837 345718 - 346746 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 292 347105 - 347147 + G 80 -16.2 -2.87132 | overlap 347130 TCGACGGCGATACCG TGCTGCTCGACGGCGGCACG ACC TGTGCCGCGCTCGCGCGGCA TCTGTCCACGCGCGA Bphy_5838 346816 - 347586 + | DeoR family transcriptional regulator TERM 293 347596 - 347615 + F 79 -12.8 -3.33815 | CCCTGATCCGATACT GCGCCGCG TGTG TGCGGCGC TTCATTCAGCGCGCT Bphy_5839 347740 - 348714 + | pyridoxal-5'-phosphate-dependent protein beta subunit Bphy_5840 348791 - 349276 + | YbaK/prolyl-tRNA synthetase associated region Bphy_5841 350089 - 349304 - | class II aldolase/adducin family protein Bphy_5842 350813 - 350109 - | haloacid dehalogenase, type II TERM 294 350808 - 350818 + g 79 -6.8 -4.46112 | GCGTGTGTTTTCGAG CGAC ATG GTCG TTTCTTTCCGTAAGC TERM 295 351705 - 351750 + G 70 -4.6 -4.36914 | gap 2, overlap 351711 351720 CCGAACTCGCGTTGG TCGGTGCGGGCGG-C-GCGCTG AACG CGGTGCAGTCCGCGCTCGTCGA TTTTCTGCGCGAAGC Bphy_5843 350930 - 351778 + | LysR family transcriptional regulator Bphy_5845 352307 - 352594 + | hypothetical protein Bphy_5846 352739 - 353713 + | LysR family transcriptional regulator TERM 296 353777 - 353767 - f 75 -5.4 -4.57353 | opp_overlap 353736 CGTTATGACATAAAA CGAA TAA TTCG CCTTGCCGATCAGAC TERM 297 354062 - 354078 + G 70 -2.2 -4.63218 | ACATTGCAGGCGTTC CTGATC TACGC GGTCGG TTTTATTGCGCGCCC TERM 298 354452 - 354463 + G 75 -3.6 -4.72986 | overlap 354428 TTTCTCACGTGGGGC TGGC GCGT GCCG TTTTTCCTCAGCATC Bphy_5847 353861 - 355228 + | major facilitator transporter TERM 299 355270 - 355257 - T 84 -3.7 -5.24129 | overlap 355259 355260 GGCGGCGACAAAAAA CAGCG TACG CGCGG CCGTGTGATGCATGC Bphy_5848 356111 - 355527 - | hypothetical protein Bphy_5849 357327 - 356155 - | major facilitator transporter TERM 300 356734 - 356748 + g 100 -2.1 -5.95539 | gap 1, overlap 356733 AATCGCGCCAAGATC GC-CGA GCCA TCGCGC TTTTTTTGTTTCGCC TERM 301 357441 - 357412 - R 73 -12.1 -3.06183 | gap 1 GGCACTTCCATTCAA CGACGGGGCGCGCC GTC GAC-CGCCTCGTCG CTGATAGGGCCGCAA Bphy_5850 358202 - 357564 - | FMN-binding negative transcriptional regulator Bphy_5851 358316 - 359878 + | transcriptional regulator Bphy_5852 360263 - 359895 - | NUDIX hydrolase TERM 302 360907 - 360936 + G 77 -12.8 -3.37796 | gap 1, opp_overlap 360879 TCGAACTGTTGGCGG CCG-CGGCGCGCG AGAAA CGCGCGCAGGCGG TTGTGCATAGTCAGA Bphy_5853 360513 - 361427 + | CHAD domain-containing protein Bphy_5854 361470 - 362351 + | hypothetical protein TERM 303 362479 - 362449 - T 100 -14 -5.52384 | overlap 362451 TGTGGATGAAAAAAA TGGCGCCGCAGG TATTCAG CCTGCGGCGCTA CGCATTGCACTACAA TERM 304 362477 - 362451 - T 88 -16.6 -2.93701 | overlap 362449 TGGATGAAAAAAATG GCGCCGCAGG TATTCAG CCTGCGGCGC TACGCATTGCACTAC Bphy_5855 365164 - 362579 - | aconitate hydratase 2 TERM 305 364440 - 364478 + g 75 -6.6 -4.4078 | gap 1, overlap 364442 TTGCGCGAGGAGCCC GTGCCGACCACGTCGCC CACGTA GGCGACCAGGT-GGCCC TTTTCCTTCAGCGAC TERM 306 365337 - 365319 - R 74 -8.1 -4.12198 | gap 1, overlap 365310 CAGAATCGCGGAAAA GGC-GCGC TCAT GCGCCGCC GGGTCCCGTCGAGCG TERM 307 365624 - 365582 - R 88 -16.3 -3.16683 | gap 1, opp_overlap 365623 ACCGCATGCTATCAA CGGCGTCGCGCGCAGCGCAC GTGT GCACGCTGCGCGCCA-ACCG AGTCACTCGTTATCG Bphy_5856 367073 - 365640 - | BNR/Asp-box repeat-containing protein Bphy_5857 367453 - 367208 - | hypothetical protein Bphy_5858 367998 - 368459 + | TadE family protein TERM 308 368511 - 368493 - g 93 -4.4 -5.34309 | overlap 368495 ATGAGCAAACAAAAA CAGCGAGG CTC CGTCGCGG TGATCACGGCCGTGA TERM 309 368509 - 368495 - g 70 -5.6 -4.29436 | overlap 368493 GAGCAAACAAAAACA GCGAGG CTC CGTCGC GGTGATCACGGCCGT TERM 310 368997 - 369012 + G 77 -4.6 -4.62069 | overlap 368994 TCGAGACCTGGCTAC GTCGGC CCCG GCGGAC TTTTTCCGCTCGCGA Bphy_5859 368469 - 369587 + | putative transmembrane protein Bphy_5860 371521 - 369791 - | polypeptide-transport-associated domain-containing protein TERM 311 371143 - 371155 + g 70 -6.2 -4.21908 | opp_overlap 371136 CATAGACATCGACGA GCGG CTTGC CCGC TTTTCGGTAGTGCTC Bphy_5861 373881 - 371602 - | filamentous haemagglutinin outer membrane protein TERM 312 373081 - 373121 + g 74 -14.8 -2.62263 | gap 1 AATGGCCTCGTGATT GCCTGCTAGCGCGTAGATG TTGC CATCCACG-GCTTGCAGGC TGATCTGCGCCGCCT Bphy_5862 374289 - 376715 + | filamentous haemagglutinin outer membrane protein TERM 313 376825 - 376807 - f 75 -3.9 -4.79075 | opp_overlap 376802, overlap 376798 376802 AAAAATGGAATAAAA GATTGTA TTCCC CACAATC TTATATTTTGCTTAA Bphy_5863 377463 - 378608 + | hypothetical protein TERM 314 378663 - 378690 + T 81 -12 -3.74526 | TGGTCGTAGTGTTCA GCCAGTGGACAA GACA TGGTCCGCTGGC TTGTTCGCTTCATCG Bphy_5864 379455 - 378877 - | putative transmembrane protein Bphy_5865 379934 - 379434 - | glutathione S-transferase-like protein TERM 315 381320 - 381295 - g 71 -4.1 -4.50976 | gap 1, overlap 381296 GGCTAGAGGAGAAAA CCCGAATTATCC GGC AGAT-ATTCAGG CAGCAGAAGCGCGCG Bphy_5866 381095 - 381463 + | hypothetical protein TERM 316 381496 - 381518 + T 78 -9.1 -4.16943 | opp_overlap 381496 AACATGTGCAGAGGA GGCGGCG TAAGCGGAT CGCCGCC TTTTCGCGTGTCCGA TERM 317 381580 - 381545 - T 73 -11.2 -3.35597 | gap 1, opp_overlap 381545 381578, overlap 381543 381578 CCGATCGCCGAAAGA CCGTGCGTCGAAGACCC TTG AGG-CTTGAACGCACGG TGTCTGCCGACGCCG TERM 318 381788 - 381815 + T 100 -22.8 -3.18582 | CGCCAACGTCGACGC GCGCTCCGACGC ATGC GCGTCGGAGCGC TTCATACGTCAGGTA Bphy_5867 383176 - 381824 - | epocide hydrolase domain-containing protein TERM 319 381902 - 381914 + g 71 -10.5 -3.65522 | TGCCGCGAAGTGCCC GCCCG TTT CGGGC TTGTTGAAGTAAATC Bphy_5868 383299 - 383198 - | hypothetical protein Bphy_5869 384328 - 384774 + | UspA domain-containing protein TERM 320 384889 - 384857 - T 100 -15.5 -4.58685 | overlap 384845 AAACGCGTCGAAAAA CGCGACGTCCTGCCC ATC GGAAGGGACGTCGCG CGAAAGCCGTTTCTT Bphy_5870 385989 - 384964 - | alcohol dehydrogenase Bphy_5871 386203 - 386688 + | hypothetical protein TERM 321 386907 - 386924 + F 71 -6.9 -4.25104 | overlap 386901 GGCCGCTATGCGCGG GTGCCGG GCTT TCGGCGC TTTTCATCCCAGGCA Bphy_5872 387201 - 387506 + | hypothetical protein TERM 322 387803 - 387837 + G 74 -5.1 -4.46926 | gap 1, overlap 387804 TCGGCGGCCGTTTAC TCGAACGGATATGATG GTCT CATC-TATTCGATCGG TTTTCTGGTGGGCTG Bphy_5873 387503 - 389164 + | SSS family solute/sodium (Na+) symporter Bphy_5874 391804 - 392718 + | LysR family transcriptional regulator Bphy_5875 392815 - 393564 + | short-chain dehydrogenase/reductase SDR Bphy_5876 393711 - 395039 + | major facilitator transporter Bphy_5877 395069 - 395920 + | transketolase domain-containing protein Bphy_5878 395917 - 396918 + | transketolase central region TERM 323 396960 - 396975 + T 90 -10.4 -4.65895 | CGGACATGGATTCAG CCCACC ATCC GGTGGG TTTTTCCATGACGGC Bphy_5879 397407 - 397060 - | transport-associated Bphy_5880 398783 - 397443 - | citrate transporter TERM 324 397957 - 397916 - G 86 -3.6 -5.1101 | overlap 397920 GCACGAGGCAAAAAA TGCACGACAGGAACAGGA GTGTCT TCCAGTCGACGTCGCGCA GTACGTTTTCGGTCG Bphy_5881 399839 - 398802 - | extracellular solute-binding protein Bphy_5882 400190 - 400819 + | hypothetical protein Bphy_5883 400859 - 401194 + | integral membrane protein TerC Bphy_5884 401465 - 402865 + | hypothetical protein TERM 325 403453 - 403428 - g 71 -7.4 -4.07687 | overlap 403430 AGTTCGTCCGGAAAA CACGACGGCC TGTACT GGCCGACGGG CCCGGGCGAACCGGC Bphy_5885 402876 - 403805 + | hypothetical protein TERM 326 404101 - 404087 - f 73 -12.8 -2.71731 | CCTACTGTCTAACGA CGCCGG GAT CCGGCG CCCAAAAGCTTGTCC TERM 327 404411 - 404379 - g 100 -11.9 -4.56597 | opp_overlap 404396, overlap 404380 404381 CCGGCCTCGGAAAAA CCGGACTGGCGGGCG CGG CGCCCGCCATTGCAA ATCCCGCCGCCCCGA TERM 328 404410 - 404380 - g 77 -13.2 -3.33744 | opp_overlap 404396, overlap 404379 404381 CGGCCTCGGAAAAAC CGGACTGGCGGGCG CGG CGCCCGCCATTGCA AATCCCGCCGCCCCG TERM 329 404409 - 404381 - g 74 -14.5 -2.60032 | opp_overlap 404396, overlap 404380 404379 GGCCTCGGAAAAACC GGACTGGCGGGCG CGG CGCCCGCCATTGC AAATCCCGCCGCCCC TERM 330 404437 - 404413 - g 74 -11.4 -3.59979 | opp_overlap 404396 GCCCGCCATTGCAAA TCCCGCCGCC CCGAC GGCAGCGGAA CTGCGCAGGCTGGCG TERM 331 405135 - 405077 - g 76 -13.8 -3.16564 | gap 1 GGCGTACGTTACGAA GCCGGCGACATCACCACCATCGCCGCT TCCGTG AGCAACGGCGGCGGCG-CGTCGCTGGC AGCGGCCGAGCAGGA TERM 332 405669 - 405622 - g 75 -11.8 -3.44146 | gap 1, opp_overlap 405618, overlap 405623 CTTCGGCACAACGAA TGCGTCGACGGGCGCAGCGGGCG TTG CGCCCGCCGTTCC-GCCGATGCC GACCGTCTTCGGGCT TERM 333 405668 - 405623 - g 75 -15.3 -2.66274 | gap 1, opp_overlap 405618, overlap 405622 TTCGGCACAACGAAT GCGTCGACGGGCGCAGCGGGCG TTG CGCCCGCCGTTCC-GCCGATGC CGACCGTCTTCGGGC Bphy_5886 404159 - 406285 + | putative D-(-)-3-hydroxybutyrate-oligomer hydrolase Bphy_5887 406766 - 406395 - | hypothetical protein TERM 334 406589 - 406571 - G 78 -4.4 -4.82901 | GGCTCGTGAGAAAAA CCCGGCGT GGA ACGGCTGG CTGGCGCTTGGCGAA TERM 335 406767 - 406734 - G 71 -3.9 -4.58395 | gap 1, overlap 406716 GTTAGTCTGTAAAAA CGCCATGCGCTCGA TCATCAT TCGAGCACAC-ACG TCATCCGTCGGCTGC TERM 336 406868 - 406856 - R 75 -10.5 -3.78775 | overlap 406819 TCGCCGATCACCAAA CGCGC GGT GCGCG ACGATGAACATCGCG TERM 337 406934 - 406955 + r 100 -15.9 -3.88232 | opp_overlap 406930 406931 406928 GCCGCTAAACAGCTG GCGCGATGC GCAT GCATCGCGC TTCTTCTGTCCGAGG Bphy_5888 407710 - 406982 - | CBS domain-containing protein TERM 338 408102 - 408077 - R 95 -13.9 -4.2349 | overlap 408093 GCGGCACATGCAAAA GCGCGGCGCCC AGCA AGGCGCTGCGC AGACAGCCTGCCGCT TERM 339 408127 - 408108 - R 84 -15 -2.87132 | opp_overlap 408107, overlap 408093 GGCGCTGCGCAGACA GCCTGCCG CTGG CGGCAGGC CTTGCATGAGCGATC Bphy_5889 409289 - 408141 - | extracellular ligand-binding receptor Bphy_5890 409683 - 409988 + | hypothetical protein Bphy_5891 410770 - 410009 - | short-chain dehydrogenase/reductase SDR TERM 340 410582 - 410611 + g 93 -13.6 -4.18018 | gap 1 ATCTGCGCTGTCCGC GCGCACGGCTAGC GCCCG GC-GGCCGTGCGC TTTTACGTCGGCCGC Bphy_5892 411694 - 410852 - | hypothetical protein TERM 341 411204 - 411186 - G 74 -5.2 -4.48987 | overlap 411189 GCGGTATAACTAAAA GACCGTCC GTC GGACAACC TCACGCCGATGCCAT Bphy_5893 411817 - 412704 + | LysR family transcriptional regulator Bphy_5894 413892 - 412723 - | major facilitator transporter TERM 342 413290 - 413278 - G 71 -9.1 -3.75153 | overlap 413280 GCGTGGCAACGCAAA CAGCG GGC CGCTG CTCGCCTGGACCGTC TERM 343 413899 - 413933 + r 95 -17.8 -3.53224 | overlap 413900 CGTGTTCATGGGCTG TCTGGCACGTCGGCCG CCA CGACCGACGTGCCGGC TTTCGACAGGGCCTG TERM 344 413900 - 413932 + r 100 -21.3 -2.71791 | overlap 413899 GTGTTCATGGGCTGT CTGGCACGTCGGCCG CCA CGACCGACGTGCCGG CTTTCGACAGGGCCT Bphy_5895 414671 - 413889 - | DeoR family transcriptional regulator Bphy_5896 414958 - 414752 - | AMP-dependent synthetase and ligase Bphy_5897 415768 - 415313 - | guanine-specific ribonuclease N1 and T1 Bphy_5898 416242 - 415892 - | transport-associated TERM 345 416388 - 416356 - R 100 -22.1 -3.28712 | CGTCGTTTCGCAGAA GGTGAGGCGGCTCTA CCG TCGAGCCGCCTCACC CTGCACGATGAAACT Bphy_5899 419403 - 416647 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 346 417738 - 417687 - G 90 -15.9 -3.53012 | gap 1, opp_overlap 417701, overlap 417688 CGCCGCGTCCGTAAA GCGCTGCGACGAACTCGTCGCCCG CATAC CGGACGACGATCTCATCGC-GCGA CACAGCGCCCGACAA TERM 347 417737 - 417688 - G 90 -19.4 -2.71712 | gap 1, opp_overlap 417701, overlap 417687 GCCGCGTCCGTAAAG CGCTGCGACGAACTCGTCGCCCG CATAC CGGACGACGATCTCATCGC-GCG ACACAGCGCCCGACA TERM 348 419299 - 419275 - G 71 -7.8 -4.07568 | gap 1 CGCGCCGCGCGAAAA CGTCG-CGCTG ATCG CGGCGCCGACG GCGAGGCAAATGACA TERM 349 419884 - 419896 + r 74 -6.2 -4.41616 | CTGCCTCGACGACCT CCGC ACATA GCGG TTTCTTTGCACGCGT Bphy_5900 421364 - 420468 - | binding-protein-dependent transport systems inner membrane component Bphy_5901 422280 - 421366 - | binding-protein-dependent transport systems inner membrane component TERM 350 421934 - 421911 - G 78 -3 -4.95155 | gap 1, overlap 421915 TGCAGACGAGAAAAA GCACCGTCTGC ATC GCGGTCG-TGC GGACATGGAACGCGA TERM 351 422235 - 422179 - G 86 -9.4 -4.49314 | gap 2, overlap 422180 CACGATGAAAAAGAA TGCGAACGTCAACGTGAGCGGCGTGGCT TGC AGCCAGG-CGCTCACGCCG-CGATGGCG CAAGGACGTTTGCTT TERM 352 422234 - 422180 - G 74 -12.9 -3.28504 | gap 2, overlap 422179 ACGATGAAAAAGAAT GCGAACGTCAACGTGAGCGGCGTGGCT TGC AGCCAGG-CGCTCACGCCG-CGATGGC GCAAGGACGTTTGCT Bphy_5902 423613 - 422312 - | ABC spermidine/putrescine transporter, periplasmic ligand binding protein Bphy_5903 424715 - 423660 - | ABC transporter related Bphy_5904 425015 - 425956 + | polysaccharide deacetylase TERM 353 426237 - 426256 + G 73 -12.1 -3.31144 | opp_overlap 426216 GATTTTCGAGGCGCG GCGCGCG GTCGAG CGCGCGC TTGTCGAACTCGCGG Bphy_5905 425953 - 426687 + | GntR family transcriptional regulator TERM 354 426784 - 426814 + G 72 -6.9 -4.28656 | overlap 426794 GCTGGTGACCACGCT CGGCGCGG-ATGGCA CGG TGA-ATGCCGCGCCG TTTTCGATGTTCAAT Bphy_5906 426689 - 427276 + | hypothetical protein TERM 355 427321 - 427343 + F 76 -13.5 -2.75064 | overlap 427318 CGCGCTGGCTGTGAG CTGAGTCGC CGGAA GCGACTCAG TACTTCACTCGACAA TERM 356 427684 - 427699 + G 72 -6.8 -4.32857 | gap 1, opp_overlap 427670, overlap 427682 AGGCGCGCTCGAAGC CGC-GCG CCA CGCAGCG TTTCTCTTTGCCGAG TERM 357 427941 - 427914 - g 100 -8.5 -5.00616 | gap 1, overlap 427915 427919 GCGCCCCCGAAAAAA CCAT-AGCCGCC TATGC GGCGGCTCATGA CTCCGATCTGGTCAT TERM 358 427964 - 427977 + G 79 -2.3 -5.0133 | overlap 427965 CTGGTCATACTCGAT GCGAG CGGC CTCGG TTTTTTCAGGCGATG Bphy_5907 427634 - 428050 + | hypothetical protein TERM 359 428193 - 428161 - T 100 -9.9 -5.7946 | overlap 428164 428183 CGGCGAAGAAAAAAA GAAGCCTCGACTT TCTGAAC AAGTCGAGGCCGC AAACATCGCCACCCT TERM 360 428190 - 428164 - T 100 -12.4 -4.96435 | overlap 428161 428183 CGAAGAAAAAAAGAA GCCTCGACTT TCTGAAC AAGTCGAGGC CGCAAACATCGCCAC Bphy_5908 428619 - 428266 - | hypothetical protein Bphy_5909 428888 - 429316 + | hypothetical protein Bphy_5910 429326 - 429619 + | hypothetical protein Bphy_5911 429703 - 430362 + | two component LuxR family transcriptional regulator Bphy_5912 430497 - 431138 + | XRE family transcriptional regulator Bphy_5913 431463 - 432353 + | formyltetrahydrofolate deformylase Bphy_5914 432425 - 433666 + | FAD dependent oxidoreductase Bphy_5915 433681 - 433938 + | sarcosine oxidase delta subunit heterotetrameric TERM 361 435322 - 435291 - g 86 -15.8 -3.28924 | opp_overlap 435300, overlap 435292 CACGCTCGGCCACAA GCTGCAGGACGGCG AGCG CGCCGGCCTGCAGG CCGCGGCGCACTGCG TERM 362 435321 - 435292 - g 89 -19.3 -2.57211 | opp_overlap 435300, overlap 435291 ACGCTCGGCCACAAG CTGCAGGACGGCG AGCG CGCCGGCCTGCAG GCCGCGGCGCACTGC TERM 363 435460 - 435441 - g 77 -12.2 -3.61398 | TGCGTCGGGCAAGAA CTTCGTCG ATTT CGACGAAG ACCTGCAGCTGAAGG TERM 364 435855 - 435829 - g 75 -9.3 -3.97307 | TGCATCGAAGAAGAA GCGCTCGCCGT GCGCA ACGGCGTGGGC ATCATCGATGTCGGC TERM 365 436467 - 436450 - g 76 -5.5 -4.56597 | overlap 436452 CTGCGGCTGGAAAAA GGTCACG TGAT CGTGAGC CAGGACACGGACGGC Bphy_5916 433939 - 436905 + | glycine cleavage T protein (aminomethyl transferase) Bphy_5917 436902 - 437561 + | hypothetical protein TERM 366 437592 - 437615 + F 87 -9.4 -4.57073 | opp_overlap 437587, overlap 437608 CGAGCAAGTAGTCGA CGCGGGCGCG ATGA CGGGCCGGCG TTTTTCGAAACCCTG Bphy_5918 437657 - 438985 + | glutamine synthetase, type III TERM 367 439478 - 439423 - g 81 -16 -3.03474 | gap 1, opp_overlap 439423 CTCTACAAGGACACA GGCACGCCCGGCCAGGTCGCGGACCGC TAC GCGTTCAGCGGCCTGAC-GGGCACGCA TCTGGTCGGCCATAC Bphy_5919 439036 - 439944 + | glutamine amidotransferase class-II Bphy_5920 439932 - 440630 + | glutamate synthase alpha subunit TERM 368 440887 - 440859 - g 75 -3.7 -4.61231 | overlap 440860 440861 440870 GGATACCGCGAAAAA TGCGTGACGAAGA CCG TGCTCGGCACGCG CTTCGCGAAGAAGCC Bphy_5921 440646 - 442013 + | ferredoxin-dependent glutamate synthase TERM 369 442404 - 442415 + G 70 -2.2 -4.62471 | TCGGTGCACTGGTGG TCGG CAAT TCGA TTTTTCCGCCTTGCA TERM 370 442835 - 442848 + G 71 -8.1 -4.07568 | overlap 442847 ATCGAAAACACACTG CGCTC GGCC GAGCG TTTTGCCGACGGGGA Bphy_5922 442010 - 442909 + | methenyltetrahydrofolate cyclohydrolase TERM 371 443123 - 443158 + G 81 -13.2 -3.6579 | gap 1, overlap 443086 443113 443152 CGGCTCGCGGCCATC GCGCAGCCCGGCT-TGC TGG GCACGGCGGGGCCGCGC TTCTTCGGCTGGGTT TERM 372 443400 - 443453 + G 74 -10.2 -3.75535 | gap 2, overlap 443429 443431 CCCGCGACGCCGTGC TGCGCCGTGCG-GGC-TGGGACGTCG AAGC CGACGGCCTGTGCGGCGCGCCGCGCA TTTCCGTCTATGTCG TERM 373 443950 - 443971 + G 70 -5.8 -4.2349 | gap 1, opp_overlap 443943, overlap 443952 GCACTACACGCCGGA GCTCTCGCG GCGTG CGCGGG-GC TTTTCGCTGTGGGCA Bphy_5923 442937 - 444388 + | pyridoxal-dependent decarboxylase Bphy_5924 445443 - 444466 - | citrate (pro-3S)-lyase Bphy_5925 448330 - 445490 - | phosphoenolpyruvate carboxylase TERM 374 446046 - 445996 - G 71 -7.5 -4.13767 | gap 2 GCGCCCATGCGAAAA CCCACGGAATC-GCGCGCAG-GTCC TGC AGACTCTTCGCGCCGAACCGGCGGG CAGGGCGCGAGCCCA TERM 375 447557 - 447539 - G 70 -2.2 -4.66833 | CCCGAACTGGAAAAA GCGCGGCA TGT CGAAGCGC TCGCCCGGATAGTGG TERM 376 448132 - 448155 + g 74 -14.6 -2.55074 | gap 1 GCTCGCTCATCGATT CG-TGCGCGGC CTC GCCGCGCAGCG TGCGTTCCACTTCGG Bphy_5926 449285 - 448380 - | succinyl-CoA synthetase, alpha subunit TERM 377 448459 - 448424 - G 100 -24.8 -3.0894 | opp_overlap 448451 CAAGCACGGAGGCAA CGGTTGCGCCCAGCTC GGAC GCGCTGGGCGCAACCG AGAGGCCGTAGGACT TERM 378 449308 - 449351 + r 80 -10 -4.09739 | overlap 449309 CTCCTTATCGGTGGT TGCCGGCGAGGCGCGCGCGG TGCG CCTTGGACGCCTCGACGGCC TTTTGCGCCGCTTCC TERM 379 449309 - 449350 + r 79 -13.5 -3.05522 | overlap 449308 TCCTTATCGGTGGTT GCCGGCGAGGCGCGCGCGG TGCG CCTTGGACGCCTCGACGGC CTTTTGCGCCGCTTC Bphy_5927 450484 - 449297 - | succinyl-CoA synthetase, beta subunit Bphy_5928 451490 - 450534 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_5929 452823 - 451558 - | Serine--glyoxylate transaminase TERM 380 451822 - 451804 - G 71 -13.8 -2.73124 | opp_overlap 451804, overlap 451803 CGCGACCTTCGAAAG CCCCGCGC CGA GCGCGAGG TTGTAGCGGCGATAC TERM 381 452554 - 452578 + g 82 -15.7 -3.14211 | GAAGCGCGGCACCAG CACGCGGTCGC CGG GCGACAGCGTG TTGGTCAGCGCCGCT Bphy_5930 454186 - 452870 - | glycine hydroxymethyltransferase TERM 382 453473 - 453497 + g 77 -12.7 -3.38272 | opp_overlap 453469 453466, overlap 453475 GCGCGAAAGGATCAG GCCGCCGCGCG GAC CGCGCAGCGTC TTGTGCGTGGTGGTG TERM 383 453475 - 453495 + g 78 -13.9 -3.25896 | opp_overlap 453469 453466, overlap 453473 GCGAAAGGATCAGGC CGCCGCGCG GAC CGCGCAGCG TCTTGTGCGTGGTGG TERM 384 454135 - 454169 + g 86 -6.5 -4.87665 | gap 2 TTTCTGCCGCGATTG CATGCT-GCAGTT-CCG GAT CGGTAACGGCGAGCGTG TTTTTGTAGCTGAAC TERM 385 454471 - 454510 + G 91 -10 -4.63527 | gap 1, overlap 454453 454472 TGCATCTGACTTTGC GTCA-GTTGCGCGTGTTCG AAG CGAGCGCGCGCCACCTGAG TTTTTCGCGTGCTGC TERM 386 454472 - 454509 + G 77 -13.5 -3.37634 | gap 1, overlap 454453 454471 GCATCTGACTTTGCG TCA-GTTGCGCGTGTTCG AAG CGAGCGCGCGCCACCTGA GTTTTTCGCGTGCTG Bphy_5931 454452 - 455375 + | LysR family transcriptional regulator Bphy_5932 456207 - 455383 - | formylmethanofuran dehydrogenase subunit C Bphy_5933 457178 - 456204 - | formylmethanofuran--tetrahydromethanopterin N-formyltransferase TERM 387 456944 - 456964 + g 80 -11.8 -3.72893 | ACAGCAGCAGTGCGA CGCCGGGC CGTCC GTCCGGCG TTTCGTCGGGCGATA TERM 388 457139 - 457165 + g 73 -12.2 -3.31792 | overlap 457140 AGGTGTCGTCGATCG ATACGCCGCGCA CGC TGCGCGGCGAAG TTGTCACACTCATCA TERM 389 457140 - 457164 + g 77 -15.7 -2.58861 | overlap 457139 GGTGTCGTCGATCGA TACGCCGCGCA CGC TGCGCGGCGAA GTTGTCACACTCATC Bphy_5934 458866 - 457178 - | formylmethanofuran dehydrogenase subunit A Bphy_5935 460203 - 458863 - | formylmethanofuran dehydrogenase TERM 390 461251 - 461204 - g 80 -14 -3.41602 | gap 1, opp_overlap 461218 GCCATCCGACGACAA GGCCGC-CACGTGCAGCGCGCTC GCC GCGCGCATCGCACGCGCGCTGCC GGGTCTGGCGGGCTT Bphy_5936 460395 - 461447 + | hypothetical protein TERM 391 461816 - 461764 - g 71 -12 -3.2794 | opp_overlap 461781 TGGCAGCCATACGAA GCCGTCACGGACC-GTTGGGCTGACG TCG CCTCCGCC-AACTGGCACGCGACGGC GGCCTTGATCGCGGC Bphy_5937 461437 - 462498 + | H4MPT-linked C1 transfer pathway protein Bphy_5938 462529 - 463119 + | tetrahydromethanopterin biosynthesis protein, putative kinase Bphy_5939 463874 - 463101 - | hypothetical protein TERM 392 463226 - 463196 - G 81 -16.8 -2.78384 | GGGCTGGGTACGACA GCCGCGCGCGCAGA TCG TGCACGCGCGCGGC ATTGAGGCGCCCTGT Bphy_5940 464464 - 463871 - | hypothetical protein TERM 393 464273 - 464230 - G 83 -17.4 -2.54896 | gap 1, overlap 464226 GCCGCACGCAACGCA CGTGACGGG-CGGCGACCGTG GGC CACGTGCGCCGGCCCGTGACG CAGCCGGCGAACACC Bphy_5941 465852 - 464467 - | dihydropteroate synthase DHPS Bphy_5942 466433 - 465852 - | flavoprotein Bphy_5943 466635 - 467048 + | dihydroneopterin aldolase Bphy_5944 468015 - 467077 - | triphosphoribosyl-dephospho-CoA protein Bphy_5945 468968 - 468015 - | alpha-L-glutamate ligase TERM 394 468255 - 468300 + g 71 -12.3 -3.29144 | gap 1 GGCGAGCGCCGCGAG CGGCGCGCCGAGCTC-CGCCGC TTC GCAGCGCGCGCCCTGCGCGACG TTGTGCACCCAATGC Bphy_5946 469998 - 468970 - | methenyltetrahydromethanopterin cyclohydrolase Bphy_5947 471154 - 469973 - | hypothetical protein Bphy_5948 472037 - 471162 - | methylenetetrahydrofolate dehydrogenase (NADP(+)) Bphy_5949 473124 - 472105 - | beta-ribofuranosylaminobenzene 5'-phosphate synthase TERM 395 472202 - 472224 + g 77 -11.3 -3.73534 | overlap 472199 TCTTGCGCGTCGCGC GCCGAACGC AGCGC GTGTTCGGC TTCTTCCTGCGATTC Bphy_5950 474288 - 473317 - | LysR family transcriptional regulator Bphy_5951 474490 - 475563 + | fructose-bisphosphatase Bphy_5952 475578 - 476450 + | phosphoribulokinase Bphy_5953 476498 - 477271 + | phosphoglycolate phosphatase Bphy_5954 479336 - 477303 - | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 396 477695 - 477714 + g 93 -13.6 -4.08216 | opp_overlap 477693 477692 CGTCCGCCGAAAGTC GGAGCGCA GGCG TGCGCTCC TTTTCCAGCAAATGC TERM 397 479535 - 479512 - R 82 -13.8 -3.28712 | TTGCGCGTGGCAGAA CGCTGCCGCA GGCA TGCGGCGGCG TCGAGGAAGAGACGG Bphy_5955 480224 - 479577 - | two component LuxR family transcriptional regulator TERM 398 480402 - 480425 + r 100 -14.6 -4.21194 | opp_overlap 480395 480396 AAAAAATAGTGTGAA CCCGGAATGC GCGT GCGTTCCGGG TTTTCCATGATGGCC Bphy_5956 481393 - 480443 - | electron transfer flavoprotein alpha subunit Bphy_5957 482193 - 481393 - | electron transfer flavoprotein alpha/beta-subunit Bphy_5958 483746 - 482190 - | leucine-rich repeat-containing protein TERM 399 483536 - 483576 + g 76 -13.9 -3.17075 | opp_overlap 483558 AGGCCGCGAGCGCGA GCCGCTCGCTGCGCGCA CCGAACA TGCGCGCCTCGAGCCGC TTGAGTTCCGCACCG Bphy_5959 485939 - 483777 - | hypothetical protein TERM 400 485075 - 485125 + g 93 -19.7 -2.92246 | gap 1 CGACTTTCGGCAGGC GCTGCGCGGCGAGCGGATCGC-GC ATCA GCAGCGAGCCGCTCGCCGTGAAGA TGTGCTTGACCTTGG TERM 401 485243 - 485214 - G 71 -12.8 -2.94099 | gap 1, opp_overlap 485212, overlap 485195 CGTGCGCAGCACATA CGCGGC-CGGCGC GCTGA GCCCCGCGCCGCG CATGATCTCGGCGAG TERM 402 486060 - 486087 + r 83 -13.4 -3.35813 | opp_overlap 486065, overlap 486056 486061 TGCGGTGAAGGGCGC AGGAAGCCGGCG GTGT TGCCGGCTTCCG TTGCTTACGGTGCGC TERM 403 486061 - 486086 + r 85 -16.9 -2.61274 | opp_overlap 486065, overlap 486056 486060 GCGGTGAAGGGCGCA GGAAGCCGGCG GTGT TGCCGGCTTCC GTTGCTTACGGTGCG Bphy_5960 488294 - 486102 - | NADH:flavin oxidoreductase/NADH oxidase TERM 404 487639 - 487667 + g 77 -5.2 -4.60924 | gap 2, opp_overlap 487615 487619, overlap 487632 AAGCGCGTTGCGATC GCGCAGTCGCTGCC CAC GGC-GCGGC-GCAC TTTTTCCAGCGTTTC TERM 405 487926 - 487945 + g 71 -10.6 -3.6502 | CGCGTACTGGCTCGG GCCGCGAG GCGT CGCGCGGC TTTCCATGCACGGTG Bphy_5961 489571 - 488459 - | glycine cleavage T protein (aminomethyl transferase) TERM 406 489789 - 489777 - H 74 -2.6 -4.89477 | overlap 489778 GGCGCAAGAAGAAAA CCAG CGCGT CCGG CGGTGAAGCGAGACT Bphy_5962 490075 - 491031 + | ferredoxin Bphy_5963 491047 - 492117 + | hypothetical protein TERM 407 492382 - 492412 + G 71 -7.5 -4.1899 | gap 1, overlap 492385 492385 492387 GACGGGTGCATTCTG GGTGGCGAGCGGCG TGCC CGC-GCTCGTCCTC TTTTCGATCGGGTCA TERM 408 492875 - 492914 + G 79 -15 -3.01924 | gap 1, overlap 492913 ACGATACTTGGCGTG GCCGCACTGGTGCCGCTGA TTC TCGTCGGCACC-GTGCCGC TCTTCAGCGGCGATC Bphy_5964 492299 - 493978 + | amino acid permease-associated region Bphy_5965 493990 - 494598 + | hypothetical protein Bphy_5966 494740 - 495882 + | porin Bphy_5967 497696 - 495879 - | integral membrane sensor signal transduction histidine kinase TERM 409 498207 - 498232 + G 73 -6.1 -4.34402 | gap 1 CGCACCTCGGGCTCG CTGCGCATTGCC TAT GGCGACG-GCAG TTTTCGTCTGCACCC Bphy_5968 497781 - 499649 + | putative PAS/PAC sensor protein Bphy_5969 500144 - 499656 - | hypothetical protein Bphy_5970 501825 - 500185 - | amino acid permease-associated region Bphy_5971 503133 - 502003 - | glycine cleavage T protein (aminomethyl transferase) TERM 410 502945 - 502959 + g 87 -5.6 -5.00616 | overlap 502947 GCTTTCGGCGTGCGG GCCCAC GTA GTGGAC TTTTTTCAGGCCGGA Bphy_5972 503533 - 503967 + | hypothetical protein TERM 411 504900 - 504928 + G 71 -7.4 -4.19817 | gap 1, opp_overlap 504900 GCTGGTCAGCGAAGA CGGACTG-GCGGC GGAT GCCGGACAGTCTG TTTTGCATCCGTCCG Bphy_5974 504595 - 506109 + | non-specific serine/threonine protein kinase Bphy_5975 506119 - 507693 + | histidine kinase Bphy_5976 509531 - 507744 - | hypothetical protein TERM 412 508890 - 508904 + g 72 -11.4 -3.48276 | TCTGACTGTGCCCGT CGGCGA CCA TCGCCG TTCTCTGCCGAGCGG Bphy_5977 509987 - 509595 - | hypothetical protein TERM 413 510118 - 510103 - H 84 -4 -5.28481 | opp_overlap 510117, overlap 510109 510110 CATTCAAGTAAAAAA GCAAAT TCGC ATCTGC ATGTTTTCTGCAGGT TERM 414 510206 - 510223 + H 75 -9.9 -3.79747 | GGACGGCCATACCTT CGTTAGC GAAG GCTAACG TTTAATCGTACGTCC Bphy_5978 510771 - 511343 + | type VI secretion protein TERM 415 511569 - 511556 - g 82 -6.7 -4.62069 | opp_overlap 511556 CGGCTACGCGAAAAA GCTGA TCGG TCAGC TCGCTTCGCAGATTC TERM 416 512107 - 512145 + G 71 -7.6 -4.10164 | gap 2, opp_overlap 512093, overlap 512121 GCGCCGAACTCGCCG CATGGCGC-AG-CTTCCG CGATT CGGAAGACTCGCGTTATG TTTCTCTGGTGCTGC Bphy_5979 511410 - 512918 + | EvpB family type VI secretion protein Bphy_5980 512987 - 513475 + | hypothetical protein TERM 417 513459 - 513492 + F 73 -10.9 -3.33696 | gap 1, opp_overlap 513451 CGAAGAACGTGTCGG CGCC-GCCGGCGGGCT GAT AGGCTGACGGCCGGCG TTACTTCCAAACACG Bphy_5981 513551 - 514006 + | type VI secretion system lysozyme-related protein TERM 418 514836 - 514873 + GF 74 -8.3 -4.19953 | overlap 514837 514852 514866 GTGTTTCATCTTGAC CGTTCGCCGCGCGGCCT CGGC ATGCTGCGCGCTGAACA TTTTCAGCTTGGCTG TERM 419 514837 - 514872 + GF 73 -11.8 -3.1149 | overlap 514836 514852 514866 TGTTTCATCTTGACC GTTCGCCGCGCGGCCT CGGC ATGCTGCGCGCTGAAC ATTTTCAGCTTGGCT TERM 420 515051 - 515063 + GF 76 -9.1 -4.09864 | GACCGATCGCGTTGA GCACG TGC CGTGC TTTTCCGCGATCGAT Bphy_5982 513996 - 515765 + | type VI secretion protein Bphy_5983 515720 - 516853 + | type VI secretion protein Bphy_5984 516865 - 519594 + | type VI secretion ATPase Bphy_5985 519599 - 521524 + | type VI secretion system Vgr family protein Bphy_5986 521533 - 522255 + | hypothetical protein Bphy_5987 522278 - 522664 + | hypothetical protein Bphy_5988 522708 - 522953 + | hypothetical protein Bphy_5989 522967 - 523941 + | extracellular solute-binding protein Bphy_5990 523973 - 525247 + | sodium:dicarboxylate symporter Bphy_5991 525256 - 525957 + | aspartate racemase TERM 421 526116 - 526126 + G 91 -6.8 -5.055 | GCAATTCCGCTGCTG GTCG TCG CGAC TTTTTTCGGGCTTCG TERM 422 526696 - 526748 + G 95 -16.4 -3.94634 | gap 2, overlap 526696 TCGCCGCTTCCACGT CG-TTGCTTGCCGC-CGTCGCGATCG GCA CGATCGCGACGCGTGCCGGGCAGCCG TTCTTTCGCGTGCTG TERM 423 526696 - 526747 + G 85 -16.6 -2.96298 | gap 1, overlap 526696 TCGCCGCTTCCACGT CGTTGCTTGCCGC-CGTCGCGATCG GCA CGATCGCGACGCGTGCCGGGCAGCC GTTCTTTCGCGTGCT Bphy_5992 525954 - 527378 + | sodium:dicarboxylate symporter TERM 424 527748 - 527774 + G 72 -2.8 -4.62471 | overlap 527754 GTGGTGACGAGTTTG CGGGTCCGCGTG TGG CAGGCGCGTTCG TTTTTGCGAATTACG Bphy_5993 527375 - 527887 + | hypothetical protein Bphy_5994 527884 - 529218 + | type VI secretion protein TERM 425 529926 - 529949 + G 77 -11.8 -3.5627 | gap 1 CCGTGATTCTGATGC TCGCC-GCAGT ATC ACTGCTGGCGA TTTCCGAAATGCTGT Bphy_5995 529280 - 530032 + | hypothetical protein TERM 426 530265 - 530236 - g 71 -10.8 -3.60971 | opp_overlap 530234 530230 530241 530258 ACGCGAAGCCGCAAA CCGAGCGCAA GATCGTGCGT TTGCGCTCGG ACTCGTTGCGTAGCG TERM 427 532488 - 532507 + G 71 -10.7 -3.64703 | GAATTTCAGGCGTTT CGCAGCG AACTGG CGCTGCG TTTCGGTGGGGCCAC TERM 428 534213 - 534188 - g 75 -14.7 -2.70932 | opp_overlap 534192 CCTGTTGCCCAAGCA GGCGCACGGAC GCGT GTTCGTGCGCC TGGCACTCATGCCGG TERM 429 534253 - 534241 - g 72 -3.3 -4.63218 | overlap 534243 534244 CGGCGGGCAAGAAAA CACCG CTG CCGTG GCCCGGCAGCTTCCC Bphy_5996 530121 - 534299 + | IcmF-like protein Bphy_5997 534296 - 535444 + | ImpA family type VI secretion-associated protein Bphy_5998 535602 - 536714 + | hypothetical protein TERM 430 536958 - 536970 + G 75 -4.1 -4.67038 | GTCGATTATTGACTC CACAT CAA GTGTG TTTTGATTTTCGGAG Bphy_5999 536930 - 537469 + | AraC family transcriptional regulator TERM 431 537970 - 537992 + T 72 -9 -3.86346 | overlap 537989 CTGACGGAGATCGCA GCGAGGCAGC CTC GATGCCGCGC TTTGTCGGCGCCTGA Bphy_6001 538375 - 538103 - | hypothetical protein Bphy_6002 538664 - 538530 - | hypothetical protein Bphy_6003 539006 - 538809 - | hypothetical protein TERM 432 539645 - 539629 - R 72 -4.4 -4.62872 | ACGAACTGGCAAAAA CAGCAA CGGAT CTGCTG AGCGGCGTAAAAGAG Bphy_6004 540550 - 539708 - | hypothetical protein TERM 433 540635 - 540604 - H 76 -7.2 -4.41348 | gap 1, opp_overlap 540616 540617, overlap 540605 540615 CGGGGCGCAAATAAA GCCGCGATGAACGGC GGG GCCGCTCGT-GCGGA CCCGCGTTCGTGTCA TERM 434 540616 - 540641 + H 75 -11.7 -3.29739 | opp_overlap 540605 540604 540615, overlap 540617 AAAGCCGCGATGAAC GGCGGGGCCGC TCGT GCGGACCCGCG TTCGTGTCAATTCAA TERM 435 540617 - 540640 + H 81 -15.2 -2.57522 | opp_overlap 540605 540604 540615, overlap 540616 AAGCCGCGATGAACG GCGGGGCCGC TCGT GCGGACCCGC GTTCGTGTCAATTCA Bphy_6005 541204 - 541500 + | hypothetical protein TERM 436 541567 - 541580 + G 100 -5.2 -5.86465 | TTATGGCTACTCGCG GCCG TGAACT CGGC TTTTTTTATCTTCTT Bphy_6006 541525 - 542193 + | hypothetical protein TERM 437 542857 - 542867 + G 70 -4.6 -4.34488 | overlap 542853 GCGGTCGCGGGGGAG GCGG GCG TCGC TTTCTTCTCGATATC TERM 438 543887 - 543921 + G 72 -7.1 -4.21194 | gap 1, overlap 543888 CGATCGACGCCGCAG TGCGCGAGCTGAT-CG AGAC CGCATCCGCTTGCGCC TTTTCGATCCTGCAG Bphy_6007 542212 - 544149 + | ATP-dependent metalloprotease FtsH TERM 439 544356 - 544328 - T 81 -3.8 -5.03314 | CCCACGTTTAAAAAA CATCGTGACAGA CGCCT TCTGCCTGGATG AGCGCGACGTCGCCG Bphy_6008 547007 - 544593 - | heavy metal translocating P-type ATPase TERM 440 545051 - 545092 + g 75 -7.9 -4.2828 | gap 1, overlap 545025 CCACCAGCCGCGCGA TCGCTTCTGCAGTGCGGCGA TTG TCGCCGCTAAGCAGCA-CGA TTTTGATGCCTCGCG TERM 441 545941 - 545951 + g 84 -8.2 -4.56775 | overlap 545916 545927 CCGCCGATCACGGCA GCGC CCG GCGC TTTTTCGACGGGCAT TERM 442 546147 - 546170 + g 71 -3.7 -4.49316 | opp_overlap 546123, overlap 546146 546145 CGGTTTGAGATCGAG TAGCCGGCG CACCGC CGCCGACGA TTTCTTCTTGATGAT TERM 443 546527 - 546581 + g 70 -14.1 -2.51173 | gap 1, overlap 546526 546560 GTGCGAGGAAGGCCC CGGCGCGCAG-GATCGCCAGCGCGAG CACA CCCGTGAGGGCGATCGCCACGCGCCG CTTCATCGCCTTCAT TERM 444 547555 - 547602 + H 77 -13.4 -2.89602 | overlap 547558 CGGTTCAAGGTGATT CAGGCC-GTGACCGTGGCCCGG CTCAGA CCGGGCCA-GGCCGCCGGCCGG CTTTGGTGTGAGCCG TERM 445 547558 - 547603 + H 83 -12.4 -3.83026 | gap 1, overlap 547555 TTCAAGGTGATTCAG GCCGTGACCGTGGCCCGGCTC AGACC GGGCCAGGCCGCCGGC-CGGC TTTGGTGTGAGCCGC TERM 446 547876 - 547842 - g 77 -12.8 -3.35679 | opp_overlap 547851 547853 CCGCCGGATCGACAA GCTCGAAGAGGCGCTC GGC GTGCGTCTGTTCGAGC GCACCACGCGCAGCG Bphy_6009 547717 - 548685 + | LysR family transcriptional regulator TERM 447 548815 - 548853 + G 74 -14.7 -2.62616 | overlap 548815 548825 ATGGGTTCGTTGGCC TCGTGCGGATGATGATC ACGCC GATCGTCTTCTGCACGA TCGTCTCGGGGATCA Bphy_6010 548682 - 549992 + | sodium:dicarboxylate symporter Bphy_6011 550815 - 550033 - | extracellular solute-binding protein Bphy_6012 552168 - 550870 - | major facilitator superfamily metabolite/H(+) symporter Bphy_6013 555062 - 552375 - | CoA-binding domain-containing protein TERM 448 553527 - 553550 + g 72 -6.6 -4.25104 | opp_overlap 553528, overlap 553506 553528 CGCGTCGACGTCGAA ATCGCGATCG AATG CGTTCGCGAG TTTTGCTGCGGAGAA TERM 449 553549 - 553528 - G 71 -10.1 -3.57144 | opp_overlap 553506 553528 553527 GCGTCGACGTCGAAA TCGCGATCG AATG CGTTCGCGA GTTTTGCTGCGGAGA Bphy_6014 556371 - 555073 - | ATP-grasp domain-containing protein TERM 450 555746 - 555760 + g 81 -3.4 -5.0916 | overlap 555746 555745 AAGTCGCAGGCCACC GGCGTG AGA CGCCCC TTTTTATCTTCGCGC TERM 451 556670 - 556641 - R 73 -12.3 -3.14344 | opp_overlap 556630 GATGCGTTTTATGAA CGTCTTGAGCA TCGATATT TGCTCAAGACG CCTTAAACGATAAGT Bphy_6015 558085 - 556769 - | major facilitator superfamily metabolite/H(+) symporter Bphy_6016 559366 - 558152 - | CitB domain-containing protein Bphy_6017 560762 - 559353 - | precorrin 3B synthase CobZ Bphy_6018 561776 - 560856 - | LysR family transcriptional regulator TERM 452 561943 - 561923 - R 75 -9 -4.00042 | opp_overlap 561936 561937 CGCGCCACCAAACAA CTGCACGA CTGTC TCGCGCAG CCACCGGTTGCCCGC Bphy_6019 562813 - 561902 - | LysR family transcriptional regulator Bphy_6020 562954 - 563904 + | 2-dehydropantoate 2-reductase Bphy_6021 563901 - 564293 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_6022 564296 - 564754 + | dehydratase TERM 453 565938 - 565951 + G 79 -2.3 -5.03314 | GATCGACACGATGCA GACCG ACGG CGTTC TTTTTTCAAAGTGAG Bphy_6023 564754 - 565965 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 454 566089 - 566109 + G 72 -9 -4.07687 | gap 1, opp_overlap 566087 TACGGCCATCGAAGG GCC-GCTCG AACC CGAGCAGGC TTTTGCCGAGAGGGT TERM 455 566339 - 566394 + G 100 -16.2 -4.36914 | gap 3 GGCCTGCCGATGGCG GGCAAGCGG-GTGCTGCTGCTCGGCGC GGGCG GCGCCGCGC-GCGGCGCGCTGCT-GCC TTTTCTGGCGGCGCG Bphy_6024 565973 - 566806 + | shikimate 5-dehydrogenase Bphy_6025 566826 - 567269 + | 3-dehydroquinate dehydratase, type II Bphy_6026 568088 - 567378 - | IclR family transcriptional regulator Bphy_6027 568257 - 568955 + | dimethylmenaquinone methyltransferase Bphy_6028 568955 - 569902 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_6029 569925 - 570854 + | SMP-30/gluconolaconase/LRE domain-containing protein TERM 456 570966 - 570941 - g 79 -11.1 -3.90318 | gap 1, overlap 570942 TGAGCATTTCACAAA CCCTGC-GCGCC GAG GGCGCCGCACGG CACGCCGACGCACAA TERM 457 571677 - 571638 - g 80 -5.1 -4.72497 | gap 3 CAGCGACGAAGAAAA GTCGTCGCTCGCTCG-GCGC CTC GCGCTCGAAC-AG-GATGAC ATCGGTGCAAAGCAT TERM 458 572055 - 572072 + G 70 -2.6 -4.71426 | GTTTCAGGCGACCTA CTGGGC CATTCC GTCCGG TTTTCTTACTGGGCG Bphy_6030 570925 - 572304 + | major facilitator transporter Bphy_6031 572350 - 573501 + | porin TERM 459 574018 - 574045 + G 74 -11.2 -3.60296 | opp_overlap 574010 574009 GACGAATCCGGCGTT CCGGCAGGGTGT CAGG ACGCTCGGCCGG TTTGGCCTGGCGCTC TERM 460 574383 - 574359 - g 71 -10.7 -3.57144 | opp_overlap 574373, overlap 574360 GGCCGTATTTCGAAA CCTGCGTCGAA CTC TTCGGCGCAGA GCGCTGCATGTTCGA TERM 461 574512 - 574493 - g 82 -5.6 -4.72272 | TCCGCCGACGAAAAA GCCGCGCT GTTC AGCGGGAC CGCGGCTTCGACTTA Bphy_6032 573512 - 574558 + | amidohydrolase 2 TERM 462 575112 - 575128 + G 82 -4.4 -4.98255 | gap 1, overlap 575111 CGACGGGCTTGCGGG GCACGGC TGGC GCC-TGC TTTTTCTGATTGGCG TERM 463 575140 - 575150 + G 91 -8.2 -4.84246 | CTGCTTTTTCTGATT GGCG CAT CGCC TTTCTTTATTCTTTT Bphy_6033 574555 - 575835 + | major facilitator transporter Bphy_6034 575832 - 577070 + | major facilitator transporter Bphy_6035 577082 - 578404 + | major facilitator transporter Bphy_6036 579409 - 578567 - | binding-protein-dependent transport systems inner membrane component TERM 464 578984 - 578951 - G 84 -12.4 -3.99324 | gap 1 GGTGATGACGACAAA CGGCGTGCCGAGCGC CGCGT GCGC-CAGCACGACG CCGGGATACGAGTTC Bphy_6037 580705 - 579440 - | binding-protein-dependent transport systems inner membrane component TERM 465 579982 - 580002 + g 79 -6.8 -4.56775 | opp_overlap 579992 ACGGCACGATGACGA GCAGCATC AAGCG GTTGCTGC TTTTTGCGGGCAGAT Bphy_6038 581786 - 580731 - | extracellular solute-binding protein Bphy_6039 582975 - 581788 - | spermidine/putrescine ABC transporter ATPase subunit Bphy_6040 584156 - 583008 - | Rieske (2Fe-2S) domain-containing protein Bphy_6041 585283 - 584357 - | LysR family transcriptional regulator Bphy_6042 585484 - 586863 + | FAD dependent oxidoreductase Bphy_6043 586917 - 587354 + | endoribonuclease L-PSP Bphy_6044 587365 - 588042 + | hypothetical protein Bphy_6045 588035 - 589204 + | acetylornithine deacetylase (ArgE) Bphy_6046 590389 - 589373 - | LacI family transcription regulator TERM 466 590514 - 590489 - H 71 -6.9 -4.13767 | gap 1, opp_overlap 590489 590490, overlap 590490 590505 TTTTTGACTTCAAAA CCGGTTTGG-CC TAA GATCCAAACCGA TTTGGAAATATTCAG Bphy_6047 590554 - 592149 + | levansucrase Bphy_6048 592254 - 592520 + | GntR family transcriptional regulator TERM 467 594049 - 594092 + G 95 -14.6 -4.07568 | gap 1, overlap 594043 CGGTCGCACGGTCAT CACGGACCTGATCTTC-CCGG CAC CCGGCGACGATCATGTCCGCG TTTTCGCGGAAGGCG Bphy_6049 592517 - 594151 + | levanase TERM 468 595441 - 595429 - g 71 -9.1 -3.7331 | overlap 595427 AGGTGCACGAAAATA TCGCG GTG CGCGA GGGAGGCGTCATTGG Bphy_6050 594624 - 596141 + | lytic transglycosylase catalytic Bphy_6051 599337 - 596392 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Bphy_6052 600263 - 599469 - | hypothetical protein TERM 469 599616 - 599604 - G 77 -4.8 -4.61482 | opp_overlap 599604 CGTTTCAAAAAAGAA TCCG AGGAA CGGA TGGTTGACCTTGGCC TERM 470 600337 - 600292 - R 100 -12.7 -5.24129 | gap 2, opp_overlap 600289 600292, overlap 600295 GTGGTTGAGAAAAAA GTACGTCGCGCTCGAAAGTCG CGAAAT CG-CTC-CGAGCGCGACGAAC TAGGTTCTCATGAAC TERM 471 600334 - 600295 - R 79 -13 -3.44801 | gap 2, opp_overlap 600292 600289, overlap 600292 GTTGAGAAAAAAGTA CGTCGCGCTCGAAAGTCG CGAAAT CG-CTC-CGAGCGCGACG AACTAGGTTCTCATG Bphy_6053 601633 - 600785 - | hypothetical protein Bphy_6054 602963 - 602382 - | signal transduction protein Bphy_6055 603614 - 603078 - | hypothetical protein TERM 472 603309 - 603297 - G 75 -7.7 -4.24002 | GGCGAAACTGCAAAA GAACG CAA CGTTC TTGAAGTGTGATCGG Bphy_6056 605071 - 604391 - | transport-associated TERM 473 605277 - 605267 - R 71 -8.2 -4.08216 | TGACGCGGCGGAAAA CCCG GTA CGGG AAATGAATAAAGCGC Bphy_6057 605696 - 605379 - | hypothetical protein TERM 474 606157 - 606144 - g 71 -9.5 -3.69094 | overlap 606135 AATGGACCATCGAAA CCGGC GGCT GCCGG GACTGGCAGCCGTAT Bphy_6058 606020 - 606439 + | outer membrane autotransporter barrel protein Bphy_6059 606610 - 606422 - | CopG/DNA-binding domain-containing protein Bphy_6060 606987 - 606760 - | hypothetical protein Bphy_6061 607308 - 607060 - | hypothetical protein Bphy_6062 607650 - 607333 - | phosphotransferase system, phosphocarrier protein HPr Bphy_6063 608204 - 607707 - | hypothetical protein TERM 475 608289 - 608273 - R 74 -2.3 -4.96468 | opp_overlap 608273 608276 GAAATGCAAATAAAA TGCTAAT TAC ATTATCA TATCATGTGTGTGTT TERM 476 608344 - 608375 + r 83 -13.7 -3.61398 | gap 1, overlap 608362 GCGTTCTCTACCAGG CCGGCACGGGGCGC CAGGC GCGACCC-TGCCGG TTCTTCACCGGGGAG Bphy_6064 609159 - 608380 - | hypothetical protein TERM 477 609114 - 609091 - G 81 -9.5 -4.29845 | opp_overlap 609110, overlap 609092 GAACGCAAGGGAAAA CCCGAGGCG CCTGTT CGCCTCGGT ACTCCGGTCCTTTCC TERM 478 609113 - 609092 - G 72 -13 -3.17184 | opp_overlap 609110, overlap 609091 AACGCAAGGGAAAAC CCGAGGCG CCTGTT CGCCTCGG TACTCCGGTCCTTTC TERM 479 611520 - 611557 + G 82 -15.5 -3.07534 | gap 1, overlap 611556 ATTGTCAGACGTATC GCGGCGCTGGCCGGCCTG CTT CAGGCGGGCC-GCATCGC TGTCTATCTGATGTA Bphy_6065 609609 - 611618 + | NADH dehydrogenase (quinone) Bphy_6066 611615 - 612565 + | formate hydrogenlyase subunit 4 Bphy_6067 612566 - 613225 + | hypothetical protein TERM 480 614243 - 614261 + G 70 -2.3 -4.62471 | overlap 614245 TATGACCGCGCATTC GCTCGTC AAGTC GGCGATC TTTTTCACGGTTGGC Bphy_6068 613218 - 614678 + | NADH dehydrogenase (quinone) Bphy_6069 614682 - 616256 + | NADH-ubiquinone oxidoreductase chain 49kDa Bphy_6070 616256 - 616786 + | NADH ubiquinone oxidoreductase 20 kDa subunit TERM 481 617012 - 617057 + F 76 -13.3 -2.73875 | overlap 617006 617009 617033 GGCTCGCCGCCGATG GGCATCAGGTCGTCGGTCTTG CACG CGGAACCGACGAGCTGATGCG TGGTGTTGGCAAGCC TERM 482 617692 - 617703 + F 74 -7.2 -4.37886 | overlap 617679 617678 GTTGCGCGTTGCCGG GCCG CGTG CGGC TTTTGTCCCCGGTCG TERM 483 618008 - 618055 + F 79 -13.4 -3.17075 | gap 1 CATGGCGCGCCTGGA CGGGGCGGCCGCATCGGAACG CCTGAAT CGTATCG-TGCGTTCGCCCCG TTCCATTCGCACGCA Bphy_6074 618086 - 618340 + | hypothetical protein Bphy_6075 618359 - 619456 + | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit Bphy_6076 619449 - 620429 + | transketolase central region Bphy_6077 620434 - 621558 + | dehydrogenase catalytic domain-containing protein Bphy_6078 621888 - 622460 + | TetR family transcriptional regulator Bphy_6079 622574 - 623452 + | NmrA family protein TERM 484 624808 - 624757 - g 70 -11.5 -3.33696 | overlap 624758 CCCGCGTCGAAGGAA GTGCAGGC-CGTCGCGCGGGAGTCG GGCG CAACGCCCGC-CGACGTGCCCGCGA GCCTCGCGCTGTACG TERM 485 624807 - 624758 - g 74 -15 -2.60075 | overlap 624757 CCGCGTCGAAGGAAG TGCAGGC-CGTCGCGCGGGAGTCG GGCG CAACGCCCGC-CGACGTGCCCGCG AGCCTCGCGCTGTAC Bphy_6080 623974 - 625005 + | taurine ABC transporter, periplasmic binding protein TERM 486 625323 - 625283 - g 74 -13.2 -3.29461 | gap 1 CAACGTGCTCGACAA CGTCGCGCTCGGACTTCGC TTTC GCGGCGT-CGCGCGCGACG AGCGGCACGAGATCG Bphy_6081 625002 - 625781 + | ABC transporter related Bphy_6082 625781 - 626671 + | binding-protein-dependent transport systems inner membrane component Bphy_6083 627637 - 626687 - | agmatinase TERM 487 626970 - 626944 - G 95 -14.5 -4.1399 | gap 1, opp_overlap 626957 CGAGCGACAGATAAA CG-GGCGCATCG CCGA CGATGCGCCGCG CCTCGGCCGCGACGG Bphy_6084 628396 - 627692 - | XRE family transcriptional regulator Bphy_6085 629158 - 628442 - | hypothetical protein Bphy_6086 630436 - 629171 - | amidase TERM 488 629460 - 629440 - G 76 -9.6 -4.09685 | opp_overlap 629451, overlap 629441 GCGTATGGGCGAAAA GCGGCGCG ATGCG CGCGCCGT GGCGCCTCGCGCAAG TERM 489 629459 - 629441 - G 72 -13.1 -3.05597 | opp_overlap 629451, overlap 629440 CGTATGGGCGAAAAG CGGCGCG ATGCG CGCGCCG TGGCGCCTCGCGCAA TERM 490 630324 - 630345 + g 81 -12.9 -3.64703 | overlap 630326 630328 ACGCCGCCGTCGGGC CGCGCGCCG AATG CGGCGAGCG TTTCGATCGACGCGA Bphy_6087 631275 - 630433 - | ABC transporter related Bphy_6088 631937 - 631272 - | polar amino acid ABC transporter, inner membrane subunit Bphy_6089 632615 - 631953 - | polar amino acid ABC transporter, inner membrane subunit Bphy_6090 633491 - 632634 - | extracellular solute-binding protein TERM 491 633591 - 633574 - H 78 -6.3 -4.64144 | gap 1, overlap 633551 AACAAGGTTCAAAAA GCATGAGC CGT GC-CATGC GATGGCGGCCGGTCG Bphy_6091 633800 - 635452 + | methyl-accepting chemotaxis sensory transducer Bphy_6092 635863 - 636795 + | AraC family transcriptional regulator TERM 492 636780 - 636809 + T 83 -12.2 -3.92522 | gap 2, opp_overlap 636780 CTTGCCGCCTGCAAA GGGGCGA-G-CGGG CTGA CCCGGCGTCGCCCC TTTATCCGGTTCAGA TERM 493 636809 - 636780 - T 77 -12.2 -3.53012 | gap 2, opp_overlap 636780 CTTGCCGCCTGCAAA GGGGCGA-G-CGGG CTGA CCCGGCGTCGCCCC TTTATCCGGTTCAGA Bphy_6093 639609 - 636820 - | oxidoreductase FAD-binding subunit TERM 494 637209 - 637237 + g 71 -8 -4.09864 | GATAGCGCGCCACCT CCTCGACGAAGC GGTCG GCATCGGCGGGG TTTTCGCGGATACGT TERM 495 638678 - 638666 - G 75 -3.3 -4.73682 | overlap 638667 TCGGACAAGAGAAAA GTGCG CAC CGCAT CAACCATCGGCGGCG Bphy_6094 641669 - 639900 - | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 496 641515 - 641541 + g 89 -13.1 -4.07568 | gap 1 GTGCCGCCCGACGTC GACGTGATGCCG CCGA CGGCATC-CGTC TTTTCGCACAGCAGC TERM 497 641794 - 641780 - R 72 -5 -4.7173 | opp_overlap 641780, overlap 641781 CACTATAGCTAAAAA CGGAAT TCT ATTCCA ATATTATCTTTGGAA Bphy_6095 643061 - 641844 - | porin TERM 498 641958 - 641971 + g 71 -8.1 -4.19238 | GATCTGACTGGCGCC CGCTG TGCC CAGCG TTTTGCCGTTCGCGC Bphy_6096 643863 - 643114 - | short-chain dehydrogenase/reductase SDR Bphy_6097 644702 - 643860 - | shikimate dehydrogenase substrate binding subunit TERM 499 643900 - 643885 - G 74 -4.6 -4.46212 | overlap 643886 GCGTCGAGCAGAAAA TCGACC ATGC GGTCGC ACACCCGGCCGAACA TERM 500 643941 - 643983 + g 72 -12.7 -3.14564 | gap 2, opp_overlap 643968 CGTGACGGTCTTGCA GCCCCGCGCGCGCGCCGCTTC GAT GAA-CGGCGTGAGCG-GCGGC TTGGTGACGACGTCG TERM 501 645473 - 645518 + H 79 -13.8 -3.02144 | gap 1 TGCTCGCCTTGCGCG CGCACGACCGCGGGCGCGGCC AGCAC GGCCGCGCC-GCTCGCGAGCG TCTTGCCCGCCGTGG Bphy_6100 645772 - 646809 + | oxidoreductase domain-containing protein Bphy_6101 647731 - 646823 - | NAD-dependent epimerase/dehydratase TERM 502 647768 - 647758 - H 75 -4 -4.82901 | opp_overlap 647761 TCGTCGTCACAAAAA TCTT TGC AAGA TCGCAATTTGTGGAA TERM 503 648802 - 648853 + G 74 -11.5 -3.59738 | gap 2, overlap 648805 CTCACTCGATGCCCC CGCCGCGTGGGCGCC-CG-TGTCGC TCGT GCCGCAACGTGGCGGCGACGTGGCG TTTGCGCATCTGATC Bphy_6102 647837 - 649582 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Bphy_6103 649579 - 650190 + | NIPSNAP family protein Bphy_6104 650235 - 651071 + | xylose isomerase domain-containing protein TERM 504 651192 - 651172 - f 75 -5.4 -4.60292 | CATAACAAGAACAAA TCATCCGG AGACA CCCGATGA CCTTCTCGCAGGCGG TERM 505 651496 - 651522 + G 100 -9.4 -4.89521 | CGGATCGCTTCGGCC GCAAGGCCGT GATGACG ACGGCCGTGC TTTTCTTTGGCGTGT Bphy_6105 651189 - 652586 + | major facilitator transporter TERM 506 652982 - 653011 + G 73 -9.3 -3.85698 | GGCGAGCTGGCGCGC CTTGGTGTGGTCG AGGA CGATCACATCACG TTTGTCGGCAAGGCG Bphy_6106 652685 - 653527 + | IclR family transcriptional regulator Bphy_6107 655630 - 654398 - | DotU family type IV/VI secretion system protein Bphy_6108 659703 - 655657 - | type VI secretion protein IcmF Bphy_6109 661077 - 659734 - | type VI secretion system OmpA/MotB family protein Bphy_6110 662491 - 661145 - | type VI secretion protein Bphy_6111 663021 - 662515 - | hypothetical protein TERM 507 663099 - 663053 - R 100 -23.2 -3.68261 | opp_overlap 663067, overlap 663054 GTATAAGACTCGAAA CGCCCGGTAAGTGAGCCGTA GCATTCG TGCGGCTCACTTACCGGGCA GACTACATCAGGACT TERM 508 663098 - 663054 - R 100 -24.5 -2.80474 | opp_overlap 663067, overlap 663053 TATAAGACTCGAAAC GCCCGGTAAGTGAGCCGTA GCATTCG TGCGGCTCACTTACCGGGC AGACTACATCAGGAC Bphy_6112 663624 - 663139 - | Hcp1 family type VI secretion system effector TERM 509 663683 - 663656 - R 79 -12.8 -3.44848 | gap 1, overlap 663654 GTTGCTGATGAAAGA GGCCGGG-CTCAT GTC ATGAGGCCCGACC GGACGAGGATCCGCC Bphy_6113 665196 - 663703 - | EvpB family type VI secretion protein TERM 510 664413 - 664433 + g 74 -5.4 -4.58395 | TGTCTTCCTCGAAGT CGAATTCG TCGAC CGGGTTCG TTTTTGCCCCATACG Bphy_6114 665754 - 665221 - | type VI secretion protein Bphy_6115 668524 - 665804 - | type VI secretion ATPase TERM 511 668417 - 668395 - G 74 -13.5 -3.28924 | overlap 668379 CAGGCTGCTGCATAA GCTGGTGCA ACCAG TGCACCAGC TCGACGTAGGGATTG TERM 512 669334 - 669349 + G 74 -4.6 -4.56597 | ACAGCGAGTCCGGTC TGCCGG TTGA CCCGCA TTTTTACAACGCCGG Bphy_6116 668949 - 669632 + | hypothetical protein TERM 513 670093 - 670116 + G 70 -2.2 -4.66953 | CTGCGAAATCATCAC GGCAGGACGC TACC GCTGGCTGCC TTTTTCCGATATTGC Bphy_6117 669629 - 670495 + | virulence protein SciE type Bphy_6118 670482 - 671033 + | type VI secretion system lysozyme-related protein Bphy_6119 671060 - 672949 + | type VI secretion protein TERM 514 673026 - 673041 + G 93 -6.8 -5.17576 | CCACCTGCAGGCCGA GCCGTG GCGC CATGGC TTTTTTGCGTTGATG TERM 515 673098 - 673152 + G 72 -11.4 -3.53012 | gap 2, overlap 673103 TGACCCGATCGGTAC GGCCAGGCTC-CC-GCAGGCTGAGCC CTTCA GGCTCGGCCAGCAGGCGAGCCTCATC TTTGCGCCGCGCGAG TERM 516 673103 - 673147 + G 84 -16.5 -2.84325 | gap 2, overlap 673098 CGATCGGTACGGCCA GGCTC-CC-GCAGGCTGAGCC CTTCA GGCTCGGCCAGCAGGCGAGCC TCATCTTTGCGCCGC Bphy_6120 672949 - 674037 + | type VI secretion protein TERM 517 674072 - 674056 - g 76 -2.2 -4.94962 | overlap 674057 ATAACCGAAAGAAAA GTCAGG ACAAG CCTGAG AACCGCGGCACGACA TERM 518 674288 - 674301 + G 83 -5.9 -4.8667 | overlap 674255 GCGCAGCAAGGACGT GCGCC TGGC GGTGC TTTTTATCCGGTGTC Bphy_6121 674034 - 675119 + | ImpA domain-containing protein TERM 519 675671 - 675685 + G 82 -6.4 -4.68593 | TGGATTTGAAGCGCG TCGTCT GAC AGGCGA TTTTTACCTGATCAC Bphy_6122 675123 - 675779 + | hypothetical protein Bphy_6123 675769 - 676455 + | hypothetical protein TERM 520 677477 - 677466 - g 72 -7.2 -4.27584 | ACTCGGAACCGAAAA CGCG TTGC CGCG TGATACCGAGTTCAA TERM 521 677759 - 677788 + G 72 -7 -4.21194 | AGTTCAGTGTCCGCT CGTCGTTCGTCG TGCAAC CGGCGACCGTCG TTTTCCGTCCTCCGC Bphy_6124 676639 - 678783 + | type VI secretion system Vgr family protein TERM 522 679480 - 679513 + G 84 -14.5 -3.42503 | overlap 679481 CACCCCGCCTGGCAA GTGCCGGTGCAGGCG ACGA CGACTGCACCGGCGA TTGTAACTATTAGCG TERM 523 679481 - 679512 + G 86 -18 -2.6518 | overlap 679480 ACCCCGCCTGGCAAG TGCCGGTGCAGGCG ACGA CGACTGCACCGGCG ATTGTAACTATTAGC Bphy_6125 678826 - 681066 + | peptidase M23B TERM 524 681413 - 681435 + G 88 -13.6 -3.86015 | opp_overlap 681413 CTATCCAACCCACAA CATCGAAATC GGT GATTTCGATG TTTATGAAGCGGATC TERM 525 681435 - 681413 - g 80 -13.6 -3.4285 | opp_overlap 681413 CTATCCAACCCACAA CATCGAAATC GGT GATTTCGATG TTTATGAAGCGGATC Bphy_6126 681063 - 681656 + | hypothetical protein Bphy_6127 681696 - 681950 + | PAAR repeat-containing protein Bphy_6128 681982 - 682656 + | hypothetical protein TERM 526 684026 - 684037 + F 86 -5.8 -5.03314 | opp_overlap 684018, overlap 684018 684025 ATTAATACAGCCGAG CGCA TGGC TGCG TTTTTTGGCAATGCG Bphy_6131 684745 - 685413 + | hypothetical protein Bphy_6132 685480 - 686142 + | hypothetical protein TERM 527 686256 - 686246 - f 71 -8.2 -4.08064 | AACCCTCCCGGAAAA CCGG GTA CCGG GGAGAGTATGAGATG TERM 528 686531 - 686477 - g 86 -15.3 -3.46602 | gap 1, opp_overlap 686490 CCGGCTATAGTACAA CTATCACCACCGATGGAAAATCGCGA GACT TCG-GATTTTCCATTGGCTGCGATAG CGATATCGCAAGTAC TERM 529 686609 - 686599 - g 100 -6.8 -6.09196 | GCTAAAACAAAAAAA TGGG TCG CCCA CTACGACGATGCAAG Bphy_6133 686269 - 686934 + | hypothetical protein Bphy_6134 687105 - 688211 + | transposase IS4 family protein Bphy_6135 688747 - 688367 - | transposase IS4 family protein Bphy_6136 689124 - 688717 - | transposase, putative TERM 530 689391 - 689369 - g 80 -13.6 -3.4285 | opp_overlap 689369 CTATCCAACCCACAA CATCGAAATC GGT GATTTCGATG TTTATGAAGCGGATC TERM 531 689369 - 689391 + G 88 -13.6 -3.86015 | opp_overlap 689369 CTATCCAACCCACAA CATCGAAATC GGT GATTTCGATG TTTATGAAGCGGATC Bphy_6137 689178 - 689537 + | hypothetical protein TERM 532 689777 - 689804 + G 73 -12 -3.31558 | opp_overlap 689777 GTATTGGTGACACCA CCAGTTGCGGTG CGAT CATCGCCACTGG TTCCTCTGCTACTTT Bphy_6138 689653 - 689937 + | PAAR repeat-containing protein Bphy_6139 689968 - 690231 + | transposase IS3/IS911 family protein Bphy_6142 690959 - 691537 + | hypothetical protein TERM 533 691877 - 691857 - T 83 -15.4 -2.78384 | opp_overlap 691845 GTCGGCGCGATTACA CCGCCGCC TTTGC GGCGGCGG GGTCATGAGAAGGGC Bphy_6143 693001 - 692309 - | hypothetical protein Bphy_6144 693483 - 693001 - | hypothetical protein Bphy_6145 694999 - 693566 - | TPR repeat-containing protein TERM 534 695259 - 695220 - R 79 -13.6 -3.05384 | opp_overlap 695222, overlap 695224 GGTGTTTTGATTGAA CACAGTATCCGTGCTGTC ACCC GACGGGACGGATACGGTG TCATGCATGCAACGA TERM 535 695222 - 695257 + r 73 -12.6 -2.80816 | opp_overlap 695220 695224 TGTTTTGATTGAACA CAGTATCCGTGCTGTC ACCC GACGGGACGGATACGG TGTCATGCATGCAAC Bphy_6146 695948 - 695700 - | hypothetical protein Bphy_6147 696883 - 695996 - | NAD-dependent epimerase/dehydratase TERM 536 697011 - 697021 + G 75 -6.8 -4.36914 | GTCAGTCTGCCTGCA TCGC TCG GCGA TTTTCTGAAGAGCCG Bphy_6148 696990 - 697844 + | XRE family transcriptional regulator Bphy_6150 698855 - 700999 + | 5-oxoprolinase (ATP-hydrolyzing) Bphy_6151 701019 - 703343 + | hydantoinase B/oxoprolinase Bphy_6152 703382 - 703900 + | acetone carboxylase gamma subunit TERM 537 703909 - 703929 + F 85 -11.1 -4.08767 | GGTTTGATACGTCGA GGCCGCC CGCTGTT GGCGGCC TTTTCGGCGCGTCCC TERM 538 703963 - 703991 + F 100 -21.1 -4.17762 | overlap 703984 GCAGGGCGTTCGATT TCCGGCCGTTCGA TTT TCGGACGGCCGGA TTGTTTTCGGGCGTC TERM 539 704185 - 704170 - f 76 -7.5 -4.45151 | AAGACTTAATGAAAA GGCCG ATTGCA CGGCC TCGCGGTTCGCATCG TERM 540 705252 - 705234 - g 72 -11 -3.48395 | AGGTGGGCGAGACAA GCTGCGCA GCG TGCACAGC GGGGCCGGCGCGTTC TERM 541 705547 - 705565 + G 75 -8.1 -4.2828 | gap 1 GCCGGTAAGATCGAG GCG-GCCG ATGG CGGCACGC TTTTCCTCGATGAGA Bphy_6153 704224 - 706293 + | Fis family GAF modulated sigma54 specific transcriptional regulator Bphy_6154 706634 - 706386 - | hypothetical protein Bphy_6155 707629 - 707249 - | HNH endonuclease Bphy_6156 709018 - 708092 - | LysR family transcriptional regulator Bphy_6157 709303 - 710916 + | thiamine pyrophosphate binding domain-containing protein Bphy_6158 710957 - 712408 + | aldehyde dehydrogenase Bphy_6159 712473 - 713417 + | 2-dehydropantoate 2-reductase TERM 542 713654 - 713635 - g 84 -13.6 -3.62096 | opp_overlap 713635 CTTCAGCACTTCAAA GACTGCCG ACAT CGGCAGTC TTCTCGACGACGGAC TERM 543 713635 - 713654 + G 78 -13.6 -3.28712 | opp_overlap 713635 CTTCAGCACTTCAAA GACTGCCG ACAT CGGCAGTC TTCTCGACGACGGAC TERM 544 714351 - 714368 + G 71 -4.1 -4.57073 | AAAGGCTCGAGCAAC GCGAC GGCTTCGG GTCGC TTTTTGAGCCGGGTC Bphy_6160 713606 - 714982 + | major facilitator transporter TERM 545 715134 - 715163 + G 77 -4.9 -4.65747 | gap 1 CGACCTGAAGGCTCG TCGCGACAGG-CAC CAC GTGACCGGCTGCGA TTTTGTTCCGGATTG Bphy_6161 715102 - 715377 + | hypothetical protein TERM 546 716317 - 716293 - g 72 -11.4 -3.55563 | opp_overlap 716306 AGCCGATGTGGTAAA GGCGGTCGCA TTGGG TGCGACGGCC GTGATGCTCGGACGC Bphy_6162 715412 - 716485 + | L-lactate dehydrogenase (cytochrome) TERM 547 716706 - 716686 - T 71 -7.5 -4.1552 | overlap 716697 CAGTTGTTCAAGAAA GTCCACCGA AAG TCGGCCGAC GATGCGCCCTCGACA Bphy_6164 718195 - 717338 - | TetR family transcriptional regulator Bphy_6165 718386 - 719087 + | hydrolase Bphy_6166 719100 - 720227 + | extracellular ligand-binding receptor Bphy_6167 720283 - 721626 + | aminotransferase class-III TERM 548 721882 - 721856 - g 71 -8 -4.09864 | gap 1, opp_overlap 721879 ATCGAGCTTGCAAAA CGCGTGCGCGA CGGCAT CCGCG-ACGCG GGCGGCATTCCGCTC TERM 549 721879 - 721900 + G 75 -9.3 -3.95022 | opp_overlap 721856 CGACGGCATCCGCGA CGCGGGCGG CATT CCGCTCGAG TTTCCTGTTCATCCG Bphy_6168 721637 - 723433 + | dihydroxy-acid dehydratase Bphy_6169 723444 - 724214 + | short-chain dehydrogenase/reductase SDR Bphy_6170 725386 - 724430 - | AraC family transcriptional regulator Bphy_6171 725606 - 726592 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 550 726640 - 726608 - f 75 -5.6 -4.56597 | gap 2, opp_overlap 726624 GCCGCGTGTGAAAAA CGCGCGATAC-C-GTC GTC GAGTGCGCATCGCGCG AGTGTGATGCGCGAG Bphy_6172 726709 - 727251 + | carbonic anhydrase Bphy_6173 727366 - 727737 + | hypothetical protein Bphy_6174 727941 - 728279 + | hypothetical protein Bphy_6175 730155 - 728374 - | Rieske (2Fe-2S) domain-containing protein Bphy_6176 730597 - 730181 - | hypothetical protein TERM 551 730266 - 730248 - G 70 -5.8 -4.28049 | opp_overlap 730247, overlap 730240 TGCAAAACGCGAAAA GCGCGAGC GAT GCGCGTGC CTCGCTTGGCCATCG TERM 552 731791 - 731812 + H 73 -2.8 -4.77036 | opp_overlap 731778 731792 731794, overlap 731792 AACTATTGAGCCAAT AGACGCGG CCATTC CCGCGCCG TTTTTCGTCATGGCG TERM 553 734242 - 734221 - g 70 -7.9 -3.97139 | GAAGTCGAACAAGAA CGATGCAGC CGAC GCCGCAGCG ATCTGGGAAGCCGCA Bphy_6180 733958 - 734968 + | transposase IS116/IS110/IS902 family protein Bphy_6181 735307 - 735930 + | integrase, catalytic region TERM 554 736128 - 736104 - f 84 -7 -4.72272 | overlap 736106 CCGGGCCACGAAAAA TACCCACCGC CGAAT GCGGCGGGCG GCCCAAAGGTCAGGG TERM 555 736126 - 736106 - f 86 -11.8 -3.98256 | overlap 736104 GGGCCACGAAAAATA CCCACCGC CGAAT GCGGCGGG CGGCCCAAAGGTCAG Bphy_6183 736700 - 738109 + | cyclic nucleotide-binding protein TERM 556 738210 - 738178 - g 81 -7.8 -4.57569 | gap 2 CTACCCCGGGAAAAA TTCGCCGA-CG-GACA CGG CGTCACGACCGGCGAA GACCGGACGTGGGAG TERM 557 739300 - 739316 + G 71 -7.9 -4.18018 | opp_overlap 739283, overlap 739287 GGCCGTGCGGTGCTC CCGAACG GTT CGATCGG TTTTCGCTGGCAGAC TERM 558 740721 - 740686 - g 77 -11 -3.71794 | AGCGAAGTATGCAAA GGCCACCTCGGCGTCG AACG CGACGTCGTGCTGACC CCACTCATGCATGAC Bphy_6184 738127 - 741921 + | nitrate reductase, alpha subunit Bphy_6185 741949 - 743472 + | nitrate reductase, beta subunit Bphy_6186 743476 - 744195 + | nitrate reductase molybdenum cofactor assembly chaperone Bphy_6187 744192 - 744920 + | respiratory nitrate reductase, gamma subunit TERM 559 745490 - 745510 + G 75 -7.6 -4.21408 | gap 1, overlap 745483 TATGTCGGCGTGCTG CCGCGATTG GTGG CAA-CGCGG TTTGGTTTTCACATT Bphy_6188 744932 - 745711 + | PpiC-type peptidyl-prolyl cis-trans isomerase Bphy_6189 745774 - 746154 + | hypothetical protein Bphy_6190 746151 - 746705 + | hemerythrin HHE cation binding domain-containing protein TERM 560 747061 - 747094 + G 75 -14.6 -2.66316 | overlap 747058 CACCGCGCTGGCGGA TGTGGCACGCACCT GGACCG AGGTGCGCGCCGCA TGGTCTGCTACGCCC TERM 561 747105 - 747148 + G 88 -13.9 -3.86015 | gap 2 CCGCATGGTCTGCTA CGCC-CGGCCTTG-GCGCC ATGCAGGC GGCGCGCCAGGCCGAGGCG TTTGTCGCCCACATC Bphy_6191 746747 - 748630 + | multi-sensor signal transduction histidine kinase Bphy_6192 748627 - 749322 + | two component LuxR family transcriptional regulator Bphy_6193 750378 - 749350 - | oxidoreductase FAD-binding subunit TERM 562 749597 - 749624 + g 75 -10 -3.84246 | gap 1, opp_overlap 749621, overlap 749598 TCAGCGCGCAACGCT TCGATTTCGGTCG TCG CGAC-GAAATCGG TTTCATCGTTGGCGC TERM 563 750393 - 750426 + r 95 -17.3 -3.55814 | TAATCGAGATCCTGC CGCCGGCGCGCGGCG TCTG CACGGCGCGTCGGCG TTGTATGGGTTAGTC Bphy_6194 752111 - 750450 - | hybrid cluster protein TERM 564 750937 - 750919 - G 75 -3.7 -4.59342 | opp_overlap 750920, overlap 750920 CCGACGAGAAAGAAA TGGCGGA TTGCG CCCGCCT TGACTGCCTCCACCA Bphy_6195 752665 - 752919 + | hypothetical protein TERM 565 753657 - 753688 + G 74 -10.8 -3.72576 | opp_overlap 753649 CGACGAAGTCGTGCG TGCCTGCATCGACG ATCG CGCCGATGTCGGCA TTTCGTCGGGCGGCC TERM 566 754105 - 754083 - g 73 -9.9 -3.86346 | gap 1, overlap 754086 754087 GCACGCGCTCAGAAA GAAGCCGCGC CCGC GCGCGG-TTC AGGCGCTGATCGATC TERM 567 754103 - 754086 - g 72 -8.3 -4.06419 | overlap 754083 754087 CGCGCTCAGAAAGAA GCCGCGC CCGC GCGCGGT TCAGGCGCTGATCGA Bphy_6198 753250 - 754143 + | LysR family transcriptional regulator TERM 568 754135 - 754172 + F 81 -12.8 -3.60151 | opp_overlap 754137 754152, overlap 754144 CTGCTCACGTCGAAC GAGGGTTAACGCGAAC ATCGCC GTTTGCGATGACCCTC TTGTCATTTGAGCAC TERM 569 754257 - 754267 + G 81 -4.6 -4.96848 | overlap 754254 ATCACTCAACCTCAC GGGC CGG GTCC TTTTTCTGTGCACGG TERM 570 755284 - 755270 - g 71 -12.8 -2.91912 | opp_overlap 755270 GCACCGATTCACATA CGCCGC ATA GCGGCG CGCTCGGCTGCGTTG Bphy_6199 754237 - 756198 + | 3-isopropylmalate dehydratase Bphy_6200 756272 - 757750 + | major facilitator transporter TERM 571 757775 - 757797 + T 78 -6.2 -4.62069 | opp_overlap 757785, overlap 757774 TGGCGCTGTGTCAAT GCGCGAGA ATGCCCA TCGCGCGC TTTTTCAGCTCCAGG Bphy_6201 758507 - 757770 - | ABC transporter related Bphy_6202 759562 - 758543 - | NMT1/THI5-like domain-containing protein Bphy_6203 760441 - 759587 - | binding-protein-dependent transport systems inner membrane component Bphy_6204 761082 - 760663 - | hypothetical protein Bphy_6205 761777 - 763588 + | sulfoacetaldehyde acetyltransferase TERM 572 764114 - 764124 + G 72 -6.8 -4.27441 | CGCCCGTCGTTTAAG CTCG TAT CGAG TTTCTTCCTGATGAT Bphy_6206 763673 - 764704 + | phosphate acetyltransferase Bphy_6207 764741 - 765502 + | hypothetical protein Bphy_6208 767261 - 765528 - | cobaltochelatase Bphy_6209 768253 - 767261 - | cobaltochelatase Bphy_6210 768429 - 770261 + | sulfoacetaldehyde acetyltransferase Bphy_6211 770588 - 771340 + | IclR family transcriptional regulator Bphy_6212 772456 - 771503 - | DMSO reductase anchor subunit (DmsC) Bphy_6213 773225 - 772485 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Bphy_6214 776196 - 773260 - | molybdopterin oxidoreductase Bphy_6215 776446 - 777381 + | 2-hydroxy-3-oxopropionate reductase Bphy_6216 778810 - 777428 - | major facilitator transporter TERM 573 778361 - 778304 - G 75 -12.6 -3.5002 | gap 3, overlap 778301 778300 GCCAAGCAGAACGAA CGCGTCG-CGCCAGCCGCCCGC-CGCGAC CAC GGCGAGCACGAGCGGC-GGCGTCACCGCG CCGCCCAGGCGCGCG Bphy_6217 780524 - 778884 - | AMP-dependent synthetase and ligase Bphy_6218 781957 - 780521 - | aldehyde dehydrogenase TERM 574 781427 - 781441 + g 70 -2.7 -4.60041 | CATTTGCACGAGATC GCTGG AAAGC CCTGC TTTTTGAAGCTGCGT TERM 575 782098 - 782075 - H 93 -11.1 -4.4267 | TCGGAAAATGTAAAA TTCGGGACT TTCTGC AGTCCCGAA AACCGTGTGAATCGA TERM 576 782574 - 782600 + G 85 -7.3 -4.63218 | gap 1, overlap 782558 CGTGCCGCTGCACTG CTCGGCGAGCGG GAAG CTGCT-GCTGAG TTTTCTTCCGAAGGA Bphy_6219 782155 - 782919 + | IclR family transcriptional regulator Bphy_6220 784234 - 782930 - | major facilitator transporter TERM 577 783186 - 783172 - G 79 -7 -4.58685 | AAAGTTCGGCAAAAA GCGCCG CTT CGGGGC CATACACCATCGCGT Bphy_6221 785987 - 784332 - | glucose-methanol-choline oxidoreductase TERM 578 784524 - 784489 - G 73 -14 -2.83409 | gap 1, opp_overlap 784492, overlap 784480 GAGCAATCGACGACA CGCA-GCCCGCGCGTGC CAT ACACGCGCAGGCGTTCG TCGACCACGGCGAGC TERM 579 784734 - 784710 - G 91 -17.1 -3.53224 | GACGCGCCGCGCAAA GCGCACGCCCG CGA CGGCCGTGCGC CGGTCGAGATCGGTC Bphy_6222 786198 - 787007 + | IclR family transcriptional regulator TERM 580 787020 - 787058 + T 85 -16.8 -2.66316 | gap 1, opp_overlap 787024 787042, overlap 787024 TGAGATGGGCCCGAC GCAATGGCC-CGGGCGC CCGAAA GCGCCCGTGGCCATTTC TGCTCTAATACCGCC TERM 581 787024 - 787054 + T 100 -16.2 -4.03078 | gap 1, opp_overlap 787024 787042, overlap 787020 ATGGGCCCGACGCAA TGGCC-CGGGCGC CCGAAA GCGCCCGTGGCCA TTTCTGCTCTAATAC TERM 582 787054 - 787024 - T 89 -16.9 -3.05463 | gap 1, opp_overlap 787024 787020, overlap 787042 ATGGGCCCGACGCAA TGGCC-CGGGCGCC CGAA AGCGCCCGTGGCCA TTTCTGCTCTAATAC Bphy_6223 788508 - 787063 - | amino acid permease-associated region Bphy_6224 790105 - 788684 - | FAD dependent oxidoreductase Bphy_6225 790526 - 790125 - | hypothetical protein TERM 583 790710 - 790721 + r 75 -3.6 -4.72272 | opp_overlap 790699, overlap 790705 AAACCGCGTTCAGGC CCGC GCCC GTGG TTTTTGCTCGCGAAC Bphy_6226 792233 - 790704 - | transcriptional regulator TERM 584 793179 - 793203 + G 76 -14.3 -3.05596 | GCGCGATCCGCTCGC GGGGGTGATCG TCG CGATCACCCCG TTCAATCACCCGATG Bphy_6228 792724 - 794181 + | phosphonoacetaldehyde dehydrogenase Bphy_6230 794599 - 794937 + | hypothetical protein Bphy_6231 794945 - 795208 + | hypothetical protein Bphy_6232 796824 - 795445 - | histidine kinase TERM 585 796671 - 796703 + g 71 -9.7 -3.76759 | opp_overlap 796671 CACCCACGTCAAGCA CGAGCAGCGCACGGG CGA CCTGTTCGATGCGCG TTTCGTCCCATTCCT Bphy_6233 797486 - 796824 - | two component transcriptional regulator Bphy_6234 797639 - 798013 + | cytochrome b562 Bphy_6235 798049 - 798612 + | cytochrome B561 Bphy_6236 799181 - 798672 - | hypothetical protein TERM 586 799374 - 799350 - R 100 -15.7 -5.63103 | overlap 799351 CCGCAATTAAAAAAA CGAGCCCGGAC AAG GTCCGGGCCCA AAGTAGGCGGTCGTT TERM 587 799373 - 799351 - R 100 -17 -3.96777 | overlap 799350 CGCAATTAAAAAAAC GAGCCCGGAC AAG GTCCGGGCCC AAAGTAGGCGGTCGT TERM 588 799424 - 799410 - R 72 -5.6 -4.52589 | overlap 799412 TTGGCCGAGACAAAA TCGGCG CCG CGGCGA GACGCAACTGCGCAA Bphy_6238 803107 - 801437 - | hypothetical protein TERM 589 801641 - 801608 - G 81 -7.3 -4.55295 | gap 1, overlap 801610 GCCGCCATAAAGAAA CTCGG-CGAGCACCAC CTT GCCGCGCTCGACCGTG AGCGGACACGAACCG TERM 590 802930 - 802959 + g 71 -9.1 -3.74747 | opp_overlap 802924 GCTGATGAACGGCCC TCAGGCCGGCGGC CTTT GCCGCCTGCGCGA TTTCCTCGAAGTTAG Bphy_6239 804053 - 803193 - | beta-lactamase domain-containing protein Bphy_6240 804174 - 804458 + | ArsR family transcriptional regulator TERM 591 804614 - 804640 + G 79 -10.9 -3.86194 | gap 1, opp_overlap 804582 804579, overlap 804633 CTGCTGAACTGGCCG CGCGATGACGTC ACCT GGCGTC-TCGCG TTTCTGGCGGGGCTT Bphy_6241 804470 - 804904 + | protein of unknown function DUF395 YeeE/YedE Bphy_6242 804906 - 805361 + | protein of unknown function DUF395 YeeE/YedE Bphy_6243 805416 - 806234 + | hypothetical protein TERM 592 806407 - 806439 + F 77 -13.5 -2.87132 | opp_overlap 806413 806418, overlap 806409 806413 TCCTGGCGGGCCTTC CATCAACGGAACGCG CAG CGCCTTGCGTTGATG TGTATCAAGACAGAC Bphy_6244 806539 - 807114 + | hypothetical protein TERM 593 807594 - 807612 + G 74 -11.6 -3.61178 | CACGACCGAGGTACC CGCCACGC GTG GCGCGGCG TTTCCAGTCGATACG Bphy_6245 807196 - 808083 + | rhodanese domain-containing protein Bphy_6246 808635 - 809114 + | hypothetical protein Bphy_6247 809180 - 810121 + | UspA domain-containing protein Bphy_6248 812503 - 810212 - | heavy metal translocating P-type ATPase Bphy_6250 814281 - 813115 - | RND family efflux transporter MFP subunit Bphy_6251 816647 - 814278 - | hypothetical protein TERM 594 816366 - 816326 - G 89 -14.7 -3.75332 | opp_overlap 816333 ACTCGGGAATTGAAA CGAGATGCCCGGTCGCG GGTTCAT CGAGACCGGGCACGTCG AGTGTGACATCAGAC Bphy_6252 817345 - 816641 - | ABC transporter related Bphy_6253 818051 - 817590 - | hypothetical protein Bphy_6254 819927 - 818818 - | putative urea/short-chain binding protein TERM 595 820454 - 820467 + r 83 -4.5 -5.12617 | gap 1, overlap 820455 GCCACGCCGTGGAGC G-CGCG GGA CGCGTC TTTTTTGGATGGTTA TERM 596 820455 - 820465 + r 74 -8.2 -4.1821 | overlap 820454 CCACGCCGTGGAGCG CGCG GGA CGCG TCTTTTTTGGATGGT TERM 597 821156 - 821100 - R 100 -35.5 -3.61398 | opp_overlap 821109, overlap 821101 821103 821109 CTGGGGTGGTAATAA TCATTGAAAGGCCTCCTGGCCGCCC AAAGAAA GGGCGGCCAGGAGGCCTTTCAATGG ATGACAGTTTCGTTG TERM 598 821155 - 821101 - R 100 -39 -2.76696 | opp_overlap 821109, overlap 821100 821103 821109 TGGGGTGGTAATAAT CATTGAAAGGCCTCCTGGCCGCCC AAAGAAA GGGCGGCCAGGAGGCCTTTCAATG GATGACAGTTTCGTT TERM 599 821153 - 821103 - R 100 -35.8 -2.93073 | opp_overlap 821109, overlap 821101 821100 821109 GGGTGGTAATAATCA TTGAAAGGCCTCCTGGCCGCCC AAAGAAA GGGCGGCCAGGAGGCCTTTCAA TGGATGACAGTTTCG TERM 600 821109 - 821147 + r 100 -29 -3.6682 | opp_overlap 821109 821103 821101 821100 TAATAATCATTGAAA GGCCTCCTGGCCGCCC AAAGAAA GGGCGGCCAGGAGGCC TTTCAATGGATGACA TERM 601 821147 - 821109 - R 100 -29 -3.74056 | opp_overlap 821109, overlap 821103 821101 821100 TAATAATCATTGAAA GGCCTCCTGGCCGCCC AAAGAAA GGGCGGCCAGGAGGCC TTTCAATGGATGACA Bphy_6256 821941 - 821228 - | ECF subfamily RNA polymerase sigma-24 factor TERM 602 821475 - 821492 + g 75 -4.1 -4.63218 | opp_overlap 821459 821471 ACCGCGCGAAACGCG GCTGG CAACGCGT CCAGC TTTTGTTCGAGCAAC TERM 603 821562 - 821507 - G 82 -15.4 -3.14132 | gap 2, opp_overlap 821507 CTTTTGTTCGAGCAA CGCGCG-CAACTC-GGCGCGCGCGGC TGCGGC GTCGGGCGCGGCGGAGTCGTCGCGCG TGTTGAGCGCATCCA TERM 604 821507 - 821562 + g 81 -15.4 -3.02511 | gap 2, opp_overlap 821507 CTTTTGTTCGAGCAA CGCGCG-CAACT-CGGCGCGCGCGGC TGCGGC GTCGGGCGCGGCGGAGTCGTCGCGCG TGTTGAGCGCATCCA Bphy_6257 822312 - 821941 - | blue (type1) copper domain-containing protein Bphy_6258 822839 - 822309 - | hypothetical protein TERM 605 822983 - 822966 - H 83 -14.1 -3.01924 | CACCGCTCGGCAAGA CGCCGCG TAGG CGCGGCG CCGGTGAAAGGCGCC TERM 606 823208 - 823175 - H 90 -11.7 -4.10657 | gap 1 TCACATCGGCCAAAA GCCGCG-GATCGATCC ACG GGAGCCATCACGCGGC CACTCCGAACCACAC TERM 607 823522 - 823537 + H 72 -4.6 -4.56597 | overlap 823523 CGGCGCTCGTGGCGG GCGCGT CAGG ACGCGG TTTTTCCGGAGAAGG TERM 608 823790 - 823780 - H 87 -6.8 -5.00616 | overlap 823760 TCTTCCGCGAAAAAA GTGC CTG GCAC ACGGAATAACCTCGC Bphy_6259 823860 - 824354 + | hypothetical protein Bphy_6260 824354 - 825832 + | YVTN beta-propeller repeat-containing protein Bphy_6261 826527 - 826153 - | histone family protein DNA-binding protein TERM 609 829882 - 829866 - g 74 -10.1 -3.74747 | GCAAGTTTCACTAAA CGGCCGT ATA ACGACCG GGCTCGATGCGTTCA TERM 610 830166 - 830121 - g 84 -13.9 -3.68569 | gap 1, opp_overlap 830118, overlap 830122 TTACTCATCCAACAA TGCCCCGGCG-GCCCCACCTAG GCA CCATGTGGGGCGCGCCGAGTCG TAGTGGGTTCACCCA TERM 611 830165 - 830122 - g 87 -17.4 -2.8082 | gap 1, opp_overlap 830118, overlap 830121 TACTCATCCAACAAT GCCCCGGCG-GCCCCACCTAG GCA CCATGTGGGGCGCGCCGAGTC GTAGTGGGTTCACCC Bphy_6262 827398 - 830169 + | NAD-dependent epimerase/dehydratase Bphy_6263 830250 - 830558 + | hypothetical protein TERM 612 832271 - 832258 - T 76 -3.1 -5.0133 | gap 1, overlap 832259 GACCTTCGCAAAAAA TGACGC AGG GCG-CA TCCAGCCGAGAAACG Bphy_6268 833260 - 832712 - | TetR family transcriptional regulator Bphy_6269 834327 - 833881 - | GCN5-related N-acetyltransferase TERM 613 834462 - 834488 + H 82 -6.4 -4.72846 | overlap 834464 834471 TGATGCCATGCGCTG CGGTGACGACGC AAC GCGTCGATGCGG TTTTTCCGTCTCTGG Bphy_6270 834937 - 835452 + | hypothetical protein Bphy_6271 836581 - 835511 - | ABC transporter related Bphy_6272 837463 - 836621 - | binding-protein-dependent transport systems inner membrane component Bphy_6273 838383 - 837460 - | binding-protein-dependent transport systems inner membrane component TERM 614 838322 - 838287 - G 80 -14.6 -3.17051 | gap 1, overlap 838285 838288 GCGCGAGCAGCAACA GCGCCGGCACGCGCGGC AAC GCCG-GCGCGTCGCCGC ATCTCGCGGCGTCGG TERM 615 838333 - 838288 - G 70 -14 -2.50016 | overlap 838287 838285 CGCGAGCAGCAACAG CGCCGGCACG-CGCGGCAACGC CGGC GCGTCGCCGCATCTCGC-GGCG TCGGCTGCGGCTGCC Bphy_6274 839486 - 838389 - | extracellular solute-binding protein TERM 616 838426 - 838469 + g 73 -9.7 -3.87373 | gap 3, opp_overlap 838415, overlap 838453 TAACGCTTGATCCAC GCCG-CCTGCACGAGCG-CGAG CGC CTTGTCG-TCGTGCAAGACGGC TTTCTCGGCGATCTG TERM 617 839797 - 839835 + r 71 -12.3 -2.87931 | opp_overlap 839796, overlap 839808 GTTGATCCAGACCAC GCCCGCTTCCAGCGCGT CGGCT ACGCGCTTCTGGCGGGC TATATCGCCCATGAC Bphy_6276 841328 - 840375 - | LysR family transcriptional regulator TERM 618 841468 - 841436 - H 70 -11.9 -2.72977 | overlap 841433 ACGGCACACACACCA GCTTCGGCACAGCGC GGG GTGCCATGCCGACGC AAACACGCAGTCTGA Bphy_6277 841500 - 842717 + | monooxygenase FAD-binding Bphy_6279 844515 - 843499 - | AraC family transcriptional regulator TERM 619 843918 - 843955 + g 76 -9.1 -4.09685 | overlap 843919 GTTGAGGCGCGCTCG CCCGCTGCGCGTCCT CGACGAGC AGGATGCGCAGCGCC TTTTGCACGGTCGCA TERM 620 844098 - 844062 - G 83 -5.8 -4.9218 | gap 1, overlap 844063 GATCGATCACAAAAA GCCGGTCGGCGACGA GCAACGTT TCGTCGACG-CCGGG AAAGCGCGCAACGTA Bphy_6280 845985 - 844609 - | major facilitator transporter TERM 621 845794 - 845775 - G 79 -4.2 -4.86731 | gap 1, overlap 845743 845778 TCTTCGGAAAGAAAA CGACGGCGA TGA TCGTCG-CG AGATAGCCGTACGAC TERM 622 846187 - 846142 - R 100 -26.3 -5.58209 | GTAAACGCAAAAAAA CCCGCTGTATCCGCTAACGTC GTGC GACGCCTGCGGATACAGCGGG CAACCTCGGACAATA Bphy_6281 847682 - 846207 - | permease for cytosine/purines uracil thiamine allantoin TERM 623 847133 - 847115 - G 71 -3.8 -4.58283 | overlap 847116 CAAGTCCGGCAAAAA GCACTG CGAGTAT CAGCGC AATCCATTTTTCGGC Bphy_6282 848532 - 847699 - | creatininase Bphy_6283 849816 - 848557 - | glycine hydroxymethyltransferase TERM 624 849248 - 849229 - G 77 -8.6 -4.24075 | gap 1, overlap 849230 ATCGACGAACAGAAA TGCGCCGAC GCT GTCGGCG-A TCTGGCGAAAGCGCG Bphy_6284 851091 - 849880 - | creatinase TERM 625 850858 - 850870 + g 78 -3.3 -4.87665 | GTCGATATTCGCCGA GATCG ACA CGACC TTTTTGTCCGTCACG Bphy_6285 852264 - 851251 - | AraC family transcriptional regulator TERM 626 851401 - 851441 + g 75 -14 -3.01791 | gap 1, opp_overlap 851395 ATACAGCAACTGCCG CGCGCGCAGCAGGCGGATC TCCA GATACGCTTGC-GCGGGCG TCTTGCCGAGGCGCT TERM 627 851518 - 851500 - G 81 -12.4 -3.88787 | opp_overlap 851511 851512 CGAGACGTCGAGAAA CGTCGCGA TCT CCGCGACG GACAGCGGTTCCTCG Bphy_6286 852623 - 852300 - | hypothetical protein TERM 628 852585 - 852549 - G 88 -9.4 -4.65895 | opp_overlap 852549 GCCGCGACTTAAAAA GCGATGGCGCCCGCTT ATCCG AAGTAGACTCCATCGC TGTAATCGTCCGCCG Bphy_6287 853097 - 852780 - | hypothetical protein TERM 629 852943 - 852953 + g 72 -8.2 -4.1899 | AACCGCCATTCCTGA GGCG CAG CGCC TTTTGGCTCGAGTGC TERM 630 853127 - 853116 - R 76 -7.2 -4.44915 | GAACTACCCATAAAA CCGC GCAC GCGG ATCGAAGTTGAACGC Bphy_6288 854045 - 853104 - | heat shock protein DnaJ domain-containing protein TERM 631 854683 - 854712 + G 80 -15.1 -3.14931 | gap 1, overlap 854650 854670 GCCCTGGGCGGCACC TGGCAGCACCGGTT TGC GACCGG-GCTGCCA TTGCTGCGCCATGCG Bphy_6289 854242 - 855774 + | FAD dependent oxidoreductase Bphy_6290 856471 - 855914 - | hypothetical protein Bphy_6291 856819 - 857997 + | porin Bphy_6293 859202 - 858309 - | LysR family transcriptional regulator TERM 632 860265 - 860219 - g 71 -10.7 -3.60296 | opp_overlap 860250, overlap 860252 CACCGTCATCGCAAA CGGCGGCTTGCACACGGCTGA GCGTA TCAACCACGCGCTGGCCTCCG GTGCGAATCTGGTGA Bphy_6294 859308 - 860429 + | NADH:flavin oxidoreductase/NADH oxidase Bphy_6295 861467 - 860484 - | AraC family transcriptional regulator TERM 633 861136 - 861147 + g 72 -7.2 -4.22883 | AGCATGTCGAGACGC GGGC CGGT GCCC TTGTTTTCGCTAATG Bphy_6296 861579 - 862118 + | alkylhydroperoxidase TERM 634 862137 - 862164 + F 71 -11.2 -3.21354 | overlap 862138 862140 CGCTTTGACGCGCGG ACAGGCGGCGCG ATGA CGTGTCGCCTGC TTCGTACATCTATCG TERM 635 862138 - 862163 + F 78 -14.7 -2.52491 | overlap 862137 862140 GCTTTGACGCGCGGA CAGGCGGCGCG ATGA CGTGTCGCCTG CTTCGTACATCTATC Bphy_6297 862245 - 863645 + | pyridine nucleotide-disulphide oxidoreductase dimerisation region TERM 636 864385 - 864365 - g 93 -5.4 -5.40072 | GTCGGGCGAAAAAAA GATTCTGC CCGCC GCAGGATC CAACAGCCAACCGTG Bphy_6298 863844 - 865238 + | hypothetical protein TERM 637 865334 - 865360 + F 84 -13 -3.65351 | opp_overlap 865330 865326 CCCGAAACAGACGGA CAGCGGCTTCAG ACG TTGAAGCCGCCG TTTGAATGCCCGTCG TERM 638 865512 - 865523 + F 90 -4.4 -5.47399 | overlap 865513 CAAGGCAATCCCCAA TTGC GCGC GCAA TTTTTTTCCACTTGC Bphy_6299 865612 - 866469 + | ABC transporter related Bphy_6300 866466 - 867284 + | binding-protein-dependent transport systems inner membrane component Bphy_6301 867281 - 868258 + | NMT1/THI5-like domain-containing protein TERM 639 868909 - 868924 + G 71 -4 -4.57569 | gap 1, overlap 868911 868912 TCCCCTCGCCGCATC GCTCGAT CAC ATCG-GC TTTTTCGCGCAGTCG Bphy_6302 868289 - 869662 + | amidase Bphy_6303 869719 - 870384 + | GntR family transcriptional regulator TERM 640 870375 - 870393 + F 73 -11.7 -3.02511 | GTCGGCGCGCGCGCT GGCCGCA TGAAC TGCGGCC TGTTCACCGCGTGAG TERM 641 870620 - 870656 + F 87 -9.4 -4.67353 | gap 1, opp_overlap 870649, overlap 870621 ACCTTTATTTGCGTT GTCGCTCGTGT-CGGCG CTCA CGCAGGACACGGGCGAA TTTTTGAGTCGCTCG TERM 642 870621 - 870655 + F 79 -12.9 -3.3993 | gap 1, opp_overlap 870649, overlap 870620 CCTTTATTTGCGTTG TCGCTCGTGT-CGGCG CTCA CGCAGGACACGGGCGA ATTTTTGAGTCGCTC TERM 643 872807 - 872824 + G 76 -2.6 -4.8622 | CCTGTAGACGATTCT GGCGCA CATCGC TTCGCC TTTTTGCTTCACCCG Bphy_6305 871154 - 874021 + | aminotransferase class-III Bphy_6306 874045 - 875832 + | AMP-dependent synthetase and ligase TERM 644 876246 - 876264 + G 74 -2.3 -4.77173 | CCGATCATCTGCGAT TGCGCGG ACTCG TCGCCCA TTTCTTTTCTCACCG Bphy_6307 875897 - 877162 + | cytochrome P450 Bphy_6308 877176 - 877820 + | isoprenylcysteine carboxyl methyltransferase Bphy_6309 877837 - 878640 + | glutathione S-transferase domain-containing protein Bphy_6310 878650 - 879129 + | integral membrane protein Bphy_6311 879116 - 880153 + | hypothetical protein Bphy_6312 880150 - 881496 + | FAD dependent oxidoreductase Bphy_6313 881487 - 882614 + | isobutylamine N-hydroxylase Bphy_6314 882689 - 883066 + | hypothetical protein Bphy_6316 884075 - 883320 - | IclR family transcriptional regulator TERM 645 885696 - 885656 - g 72 -8.2 -4.10657 | overlap 885658 885661 CCACACGGTCGAAAA GACGATCGACATCGCCAG CCAAT CCGGCGACGGCGATGACC AGGGCAGCGGCAACA TERM 646 885765 - 885720 - g 71 -3.9 -4.57882 | gap 1, opp_overlap 885736, overlap 885722 885724 885725 GGCAACAACAAGAAA TACAGCGGCCGCGATACGGTCA ACG TGACCGTTTCCCG-CGACGGCA GAACGCTGTACGCCG Bphy_6317 884673 - 887564 + | putative lipoprotein TERM 647 887821 - 887832 + T 83 -5.8 -5.00616 | overlap 887812 AGGCTTTCGAGGCGA CTCG CGTA CGAG TTTTTTGCAGGCGAC Bphy_6318 890525 - 887850 - | 2-oxoglutarate dehydrogenase, E1 subunit TERM 648 890214 - 890196 - G 70 -5.9 -4.20806 | GAGCGCAAAAGGAAA TCCCGCC TGATC GGCTGGA CGCACCTCGGTTGGA TERM 649 890625 - 890649 + r 87 -15.7 -2.93435 | CATCGTTTCTTTCAT CGGGCCGGC TTGCCTT GCCGGCCCG TGTCTCCGTCCTTGG Bphy_6319 892376 - 890727 - | methyl-accepting chemotaxis sensory transducer TERM 650 891827 - 891849 + g 72 -6.9 -4.2349 | gap 1 TGGCGTTGCCGCCCT CGTCGGCCGC TCGC GCGG-CGTCG TTTTGCATCTGAGCC Bphy_6320 895597 - 892940 - | excinuclease ABC, A subunit TERM 651 893589 - 893579 - G 80 -8.2 -4.41494 | GACGTTGAACGAAAA GCGC CCC GCGC TATAACGACGCTTGC TERM 652 895077 - 895093 + g 70 -2.1 -4.66609 | opp_overlap 895077, overlap 895048 CGGATCGTCAGCGAA TCGTCGG GCA CCATCGA TTTTTCGGTGACCTC Bphy_6321 896214 - 895696 - | hypothetical protein Bphy_6322 896585 - 896794 + | hypothetical protein TERM 653 896816 - 896797 - T 100 -16.4 -3.91084 | CGAGGCGCAATGAAA CCCGGGCC ACGC GGCCCGGG CCGAAGGTTCACGCA Bphy_6323 897750 - 896866 - | MarR family transcriptional regulator TERM 654 899092 - 899143 + G 80 -8.6 -4.39318 | opp_overlap 899118, overlap 899094 899095 GTTCACGTTTCCGCT CCTGTTCGGCGCGACGATCGTAAT GACG ATCGCGAGCGTCGTGCTGGGCGTG TTTTCGCTTTGATTG TERM 655 899094 - 899141 + G 71 -9.8 -3.78629 | opp_overlap 899118, overlap 899092 899095 TCACGTTTCCGCTCC TGTTCGGCGCGACGATCGTAAT GACG ATCGCGAGCGTCGTGCTGGGCG TGTTTTCGCTTTGAT Bphy_6324 897851 - 899155 + | CitMHS family citrate/H+ symporter Bphy_6325 899185 - 900543 + | hypothetical protein Bphy_6326 900530 - 900838 + | hypothetical protein Bphy_6327 902019 - 901003 - | pyridoxal 4-dehydrogenase TERM 656 901698 - 901686 - G 71 -7.7 -4.13945 | AGCTGTAGTCGAAAA CCGTT TCG AACGG CAGTCCGTCGACCCA Bphy_6328 903324 - 902077 - | extracellular solute-binding protein TERM 657 902238 - 902259 + g 87 -5.8 -5.00884 | CGCCCGTCTTGATCG TCGCCTGC TCGTCT GCACGCGA TTTTTTGGCGCAGCT TERM 658 902845 - 902866 + g 70 -11.5 -3.31144 | overlap 902846 902859 902860 GAACTCCGGCCATGT CGTCGGCGG CGTG CCGCCGACC TTATCGAGGTCCGCC TERM 659 902846 - 902865 + g 74 -15 -2.58544 | overlap 902845 902859 902860 AACTCCGGCCATGTC GTCGGCGG CGTG CCGCCGAC CTTATCGAGGTCCGC Bphy_6329 904639 - 903395 - | hypothetical protein TERM 660 905767 - 905786 + G 85 -4.8 -5.00616 | overlap 905769 CGAAGCTGATGACGC CCGCCGCC TACC GGCAGCAG TTTTTTGGCAAGAAG Bphy_6330 904932 - 905888 + | AraC family transcriptional regulator Bphy_6331 906722 - 906225 - | hypothetical protein Bphy_6332 907031 - 907450 + | hypothetical protein Bphy_6333 907498 - 907986 + | diheme cytochrome c Bphy_6334 907958 - 908686 + | cytochrome B561 Bphy_6335 908705 - 909376 + | two component transcriptional regulator TERM 661 909425 - 909457 + G 73 -6.2 -4.35116 | TGGTTCTGGTCATTG GCGGCGTGATCGGC GTATG GCTGATTACCGCGC TTTTCATCTGGCGTG Bphy_6336 909373 - 910725 + | integral membrane sensor signal transduction histidine kinase Bphy_6337 910916 - 911557 + | hypothetical protein Bphy_6338 912025 - 911696 - | hypothetical protein TERM 662 911974 - 911950 - G 72 -11.5 -3.53444 | overlap 911963 TGACTTCGGGCCAAA CGTTACGATGA AAT TCCTCGTAACG AGCAATCAGAATCGG Bphy_6339 912507 - 912055 - | hypothetical protein Bphy_6340 913689 - 912553 - | mannitol dehydrogenase domain-containing protein TERM 663 913667 - 913654 - G 70 -8.1 -3.96148 | GTGCGCCAGTAGAAA TCGGC TTGT GCCGA ATTGAAGTATCGGTT Bphy_6341 914727 - 913717 - | alcohol dehydrogenase Bphy_6342 915909 - 914890 - | pyridoxal 4-dehydrogenase Bphy_6343 916965 - 916006 - | periplasmic binding protein/LacI transcriptional regulator Bphy_6344 918055 - 917024 - | monosaccharide-transporting ATPase Bphy_6345 919598 - 918048 - | ABC transporter related TERM 664 919391 - 919411 + g 70 -14.1 -2.64472 | overlap 919389 919387 CTGGCTGGTACTGCC CGCTGATGA TTT TCATCAGCG TCGATTTGCCGGCTC Bphy_6346 919828 - 920529 + | GntR domain-containing protein Bphy_6347 920755 - 922278 + | diguanylate cyclase Bphy_6348 923293 - 922532 - | hypothetical protein TERM 665 922898 - 922927 + g 71 -9.2 -3.75153 | CTCCAGATATTCTGC GCGCTCCAGCGC CTCAGT GCCCTGCAGCGC TTTCAGTTGCGCCGG Bphy_6349 924336 - 923659 - | hypothetical protein TERM 666 924039 - 924015 - G 100 -7.9 -5.1356 | opp_overlap 924014 GGGCATCAACAAAAA GCCGTTGCA TATCTAC TGCAACGAC ATTCGCTATCTGAAC TERM 667 924391 - 924381 - H 70 -4 -4.71061 | opp_overlap 924381 ACCCATACGGAAAAA TACA TTC TGTA TGTCATGGAAGAGAA Bphy_6350 924715 - 925407 + | putative lipoprotein Bphy_6351 925473 - 926273 + | TrkA domain-containing protein Bphy_6352 926270 - 927997 + | sulphate transporter TERM 668 928134 - 928187 + G 85 -12.1 -4.09685 | opp_overlap 928174 928175, overlap 928136 GCTACCGCCATTTCA CGGGCGCGGGCCGCGCGCTTCGCGA GTGA TGGCGGGGAAAGCGGCCCGCAGCCG TTTTCCGAGATCCAG TERM 669 928136 - 928186 + G 72 -13.1 -3.05597 | gap 1, opp_overlap 928174 928175, overlap 928134 TACCGCCATTTCACG GGC-GCGGGCCGCGCGCTTCGCGA GTGA TGGCGGGGAAAGCGGCCCGCAGCC GTTTTCCGAGATCCA TERM 670 928308 - 928323 + G 74 -5.4 -4.46212 | CTATGGCCGCATGGT CGCAAG TCCG TTTGCG TTTTATCGTGGGGCG Bphy_6353 928036 - 929490 + | hypothetical protein Bphy_6354 929787 - 930065 + | hypothetical protein TERM 671 930244 - 930198 - T 91 -16.8 -3.53012 | gap 3 CGCTTGCGCGCGAAA CGTCATAGCGGGTTCGGC-CAGC AAGC GCCGCGCCGAACCCGCT-TG-CG CATCAGAAGGCGTGA Bphy_6355 931443 - 930247 - | porin TERM 672 931774 - 931754 - R 95 -13.3 -4.20136 | opp_overlap 931769 ATCGGCAAAACGAAA GAGCCGGTC ACG AACCGGCTC AGCGCGTTCTCGTCG Bphy_6356 932175 - 931798 - | transport-associated TERM 673 932160 - 932186 + g 75 -4.4 -4.67942 | overlap 932148 932148 932162 CAGCCAGCATGTGTG CTGAGTTTGCTT TCA AGGGAAACTCCG TTTTGATTTGTTGCA Bphy_6357 933607 - 932282 - | major facilitator transporter Bphy_6358 934822 - 933767 - | hypothetical protein Bphy_6359 935149 - 935919 + | hypothetical protein Bphy_6360 935916 - 936806 + | lipoprotein Bphy_6361 939339 - 936841 - | glycogen/starch/alpha-glucan phosphorylase Bphy_6362 940216 - 939515 - | hypothetical protein Bphy_6363 940539 - 941522 + | SCP-like extracellular domain-containing protein Bphy_6364 942539 - 941550 - | dihydroxyacetone kinase, DhaK subunit TERM 674 941888 - 941869 - G 70 -4.8 -4.4078 | opp_overlap 941876, overlap 941871 TCGGCTGAAGCAAAA CGCGCGCG TCGC CGCCCGGG TTCGCCATGAATGCC Bphy_6365 943171 - 942554 - | dihydroxyacetone kinase, L subunit Bphy_6366 944205 - 943186 - | ABC transporter related TERM 675 943254 - 943227 - G 70 -4.6 -4.33281 | opp_overlap 943237, overlap 943228 943229 AGCGGAAATAAAGAA GGCTGCGCGGCG GCAG CGACACGCCGAC CGTTTGCCCTGGCGC TERM 676 944014 - 943968 - G 74 -4.6 -4.58663 | gap 4, overlap 943972 AGTACTGCTGAAAAA CGAAG--GCGAC-GTCGCG-ATCC GCG GGATGCACGGCCGTCGCCGCTTCG CCATCGATGAATATC TERM 677 944008 - 943972 - G 74 -10.2 -3.80855 | gap 2, overlap 943968 CTGCTGAAAAACGAA GGCGAC-GTCGCG-ATCC GCG GGATGCACGGCCGTCGCC GCTTCGCCATCGATG Bphy_6367 945313 - 944198 - | ABC transporter related Bphy_6368 945508 - 945317 - | hypothetical protein Bphy_6369 946458 - 945505 - | binding-protein-dependent transport systems inner membrane component Bphy_6370 947411 - 946455 - | binding-protein-dependent transport systems inner membrane component TERM 678 947337 - 947366 + g 93 -17.1 -3.83998 | opp_overlap 947333 CCGGTCAGACAGTCC GCGCAGGCGCGCG ATTG CGCGCGTCTGGGC TTTCGTCTGCAATCC TERM 679 947414 - 947395 - G 72 -6.4 -4.25104 | CCTTCCGGAGGAAAA GGCTTGTT TGCC AACATGCC CGGCTCCTTGGTCTC Bphy_6371 948817 - 947486 - | extracellular solute-binding protein TERM 680 948884 - 948862 - R 74 -12.7 -2.95223 | opp_overlap 948862 948864, overlap 948864 CAACCTGATCACAGA CAGCGCCCA TGCGC CGGGCGCTG TATTCGGCTCTGGCG TERM 681 948862 - 948884 + r 73 -12 -3.07962 | opp_overlap 948862 948864, overlap 948864 CAACCTGATCACAGA CAGCGCCC ATGCGCC GGGCGCTG TATTCGGCTCTGGCG Bphy_6372 949950 - 948931 - | LacI family transcription regulator TERM 682 949705 - 949693 - G 85 -4.8 -5.00884 | overlap 949694 ATGCTCGCGAAAAAA GCTG GCCGA CAGC GCGATATCGCGCTCG TERM 683 950120 - 950092 - R 90 -10.3 -4.56597 | opp_overlap 950098 950099, overlap 950099 CGCGCGGCCGAAAAA GAAAAAACCGCAC ATC GCGCGGCTTTTAC AGCGTGTGCGCAGTC TERM 684 950113 - 950099 - R 100 -9.2 -5.93252 | opp_overlap 950099 950098, overlap 950092 CCGAAAAAGAAAAAA CCGCAC ATC GCGCGG CTTTTACAGCGTGTG TERM 685 950219 - 950246 + r 76 -13.4 -2.72661 | gap 1, opp_overlap 950218 950222 950236 CAAGTCTCCATCAAG CGAGCGGCGAGCA AAA TGC-CGCCGCGCG TCCTTCACGGTAGTC Bphy_6373 950967 - 950260 - | ABC molybdate transporter, periplasmic ligand binding protein Bphy_6374 951658 - 950975 - | 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase Bphy_6375 952685 - 951660 - | amidohydrolase 2 Bphy_6376 954107 - 952758 - | major facilitator transporter Bphy_6377 955516 - 954203 - | protocatechuate 4,5-dioxygenase Bphy_6378 956121 - 955579 - | hypothetical protein Bphy_6379 956576 - 956854 + | hypothetical protein Bphy_6380 957876 - 956869 - | alcohol dehydrogenase TERM 686 957969 - 957940 - H 75 -10.7 -3.65351 | gap 1, opp_overlap 957963 GCATCGGCATGGAAA TGGCG-ATCGCGCC CGC GACGCGGTCCGCCA GGTCGCGGAACGCCC Bphy_6381 958076 - 958495 + | HxlR family transcriptional regulator Bphy_6382 960249 - 958657 - | galactarate dehydratase Bphy_6383 960736 - 962631 + | phenol hydroxylase domain-containing protein Bphy_6384 962651 - 963082 + | MarR family transcriptional regulator Bphy_6385 963273 - 963536 + | hypothetical protein Bphy_6386 965185 - 963557 - | methyl-accepting chemotaxis sensory transducer TERM 687 964132 - 964166 + g 86 -15.6 -3.29511 | TGACGTTCGTTTCTT CGGCAAGCGCGCGCGC TGC GCGTGCGTGCTCGGCG TTCTGCGACACTGCG Bphy_6387 966601 - 965231 - | sodium:dicarboxylate symporter Bphy_6388 967926 - 966760 - | mandelate racemase/muconate lactonizing protein TERM 688 967608 - 967627 + g 75 -7 -4.45544 | CGATCGCGACGGAGC GCTCGCCG TGAC CGCCGGGC TTTTCGTTCGTGAAC Bphy_6389 968046 - 969002 + | LysR family transcriptional regulator Bphy_6390 969469 - 969014 - | GCN5-related N-acetyltransferase Bphy_6392 971130 - 969772 - | major facilitator transporter TERM 689 970513 - 970537 + g 81 -13.5 -3.57406 | overlap 970511 CAACAGTATGCGCAT GCTGTCGACGG GCA CCGGCGACGGC TCTTTCTCGTCGCGA TERM 690 971072 - 971059 - G 73 -9.5 -3.89501 | GAAGATGCCGAGAAA CGGGC CGGC GCCCG CCTGCACGTCGGCAG Bphy_6393 971255 - 971641 + | hypothetical protein TERM 691 971747 - 971728 - f 80 -10 -4.07568 | gap 1, opp_overlap 971743 GCGTGTCGTCGAAAA GCGCG-CGA CCC TCGACGCGC CGCCCGATCTCGAGG TERM 692 972167 - 972144 - g 70 -5.8 -4.27316 | overlap 972145 CGGTGCAATTGAAAA TGGCCGCGCC GCAT GGCGTGACCG TTCCGAAGGACAATT Bphy_6394 971873 - 972418 + | hypothetical protein TERM 693 972567 - 972538 - T 100 -19.3 -5.1675 | overlap 972555 972557 GGAGGCAGCAAAAAA GCGACCGGCACAG GGAA CAGTGCCGGTCGC ACGGGCGCCAGAGAT TERM 694 972622 - 972653 + T 83 -13.7 -3.36452 | opp_overlap 972621 972618, overlap 972623 CAGCAACGGAATGAC GTGCAGCGACGCG GCTCAA CGCGTCGCTGCGG TTACTCTTCGAGGCT TERM 695 972623 - 972652 + T 85 -17.2 -2.6155 | opp_overlap 972621 972618, overlap 972622 AGCAACGGAATGACG TGCAGCGACGCG GCTCAA CGCGTCGCTGCG GTTACTCTTCGAGGC Bphy_6395 972956 - 972654 - | hypothetical protein Bphy_6396 973223 - 973465 + | hypothetical protein Bphy_6397 973543 - 973725 + | hypothetical protein Bphy_6398 973873 - 974865 + | CheB methylesterase TERM 696 975269 - 975300 + G 74 -11.6 -3.68341 | gap 1, opp_overlap 975268, overlap 975273 TCATGCCGAGGCAAC CGGA-CGATGGCCGC CGC GCGGCGATCGATCTG TTCTTCCGTACGCTT TERM 697 975861 - 975841 - g 72 -11.1 -3.44146 | TTCCGCGACAAGGAA GCGTTCGAG GTG CTCGAGCGC GAAGTGCTGCCGCAA TERM 698 976888 - 976874 - g 72 -11.4 -3.53012 | TGGGCGGCTCGGAAA CGTCGG CGT CCGACG CGCAGAAAGACCCCA TERM 699 977491 - 977436 - g 72 -13.4 -3.10796 | gap 3, opp_overlap 977442, overlap 977434 977474 TCGCACGACGGAAGA CCGCATCGACGGC-G-CCGTGCTGTCG TTCAT CGACATCACGGGCCGCCGCC-AGGCGG AAGACCGTCTGCGCG TERM 700 977933 - 977900 - g 91 -16.7 -3.71873 | gap 1, opp_overlap 977900, overlap 977881 GCAGCCACACCGAAA CGCTGCGCGCCGCCGC CGA GCG-CGATGCGCAGCG GCGCCGCGACGAGTT TERM 701 977900 - 977946 + G 81 -11.2 -3.95787 | opp_overlap 977881 977900, overlap 977939 977940 GCAGCCACACCGAAA CGCTGCGCGCCGCCGCCGAGCG CGA TGCGCAGCGGCGCCGCGACGAG TTTCTCGCTGTCGTG Bphy_6399 974947 - 979032 + | signal transduction histidine kinase with CheB and CheR activity TERM 702 979037 - 979060 + F 71 -10.9 -3.28003 | opp_overlap 979037 979036, overlap 979056 TGCGGCATTAGGAAC CGCCCGGGC CGTCGC GCCGGGGCG TTCATGCTCTCTTCG Bphy_6400 979148 - 979732 + | hypothetical protein Bphy_6401 979719 - 980363 + | resolvase domain-containing protein TERM 703 980434 - 980456 + F 72 -9 -3.85698 | TCGGGCGCCGGTTAG GCGCGCTCGC GAT GCAAGCGAGC TTTGTGCCCCGACCA TERM 704 980697 - 980655 - g 81 -12.7 -3.58343 | gap 1, overlap 980694 GGCATCATTCGCAAA CGTCTTGCGACGTCGCGAGA GCCA TCGAGCG-CGACGCAAGACG ACGCGCCCACAAACG Bphy_6402 980637 - 981692 + | hypothetical protein TERM 705 981832 - 981821 - g 72 -7.2 -4.21194 | opp_overlap 981821 CCTGACGATGGAAAA GCGG ATTG CCGC TCATGTGAAAGCCGC Bphy_6403 981771 - 982067 + | hypothetical protein Bphy_6404 982727 - 982200 - | GCN5-related N-acetyltransferase Bphy_6405 982764 - 983333 + | XRE family transcriptional regulator TERM 706 983336 - 983372 + F 95 -3.6 -5.75342 | gap 1, overlap 983337 983338 CCGGAGCGCGTGAAC CTGCGGATCGCG-AGTC GCCC GGCTGCGCCGTCCGCGA TTTTTTTTCGACGCA Bphy_6406 983473 - 983844 + | DGPFAETKE family protein TERM 707 985055 - 985066 + G 91 -7.2 -5.00616 | CCTCGAACGCGACCC CGCC GTCC GGCG TTTTTTGCAGCGCAA Bphy_6407 983841 - 985112 + | RNA polymerase ECF-subfamily sigma factor TERM 708 985170 - 985131 - T 72 -8.4 -3.85698 | TGCGCGGCGGAGAAA CAGATCAGCCCGCGTGCC TGAC GGCTCGTCCGCCGATCTG CACCGCCCCGTCCCG Bphy_6408 985926 - 985135 - | phenazine biosynthesis PhzC/PhzF protein Bphy_6409 986521 - 987021 + | OsmC family protein TERM 709 987094 - 987039 - T 100 -25.7 -3.17075 | gap 1, opp_overlap 987049, overlap 987082 CGGCCGTCAACGCAA GCGGCAAGCAGTGCATCT-CGCGCGA TCGTT TCGTGCGCAGACACACTGCTTGCCGC CATCAAGCGTGAAGA Bphy_6410 987950 - 987117 - | shikimate dehydrogenase substrate binding subunit TERM 710 987994 - 988031 + r 86 -11.9 -4.08692 | TCAGGTTGGTTCAGT GGGCGAATCCGTCAGCC CGCA GGCGGTCGTATTCGCTC TTTTCGACCGGCTTC Bphy_6411 989374 - 987989 - | major facilitator transporter TERM 711 989470 - 989524 + H 100 -20.9 -3.89614 | gap 1, opp_overlap 989461 989460 989472, overlap 989470 CACAAGCGAACGATA CAC-CAGTTCGTTCGATCATCGCGCA CAAA TGCGCGATGATCGAACGCTCTGAGGG TTTGTCCGGGTTCGG TERM 712 989470 - 989523 + H 100 -21.1 -2.93447 | opp_overlap 989461 989460 989472, overlap 989470 CACAAGCGAACGATA CACCAGTTCGTTCGATCATCGCGCA CAAA TGCGCGATGATCGAACGCTCTGAGG GTTTGTCCGGGTTCG TERM 713 989521 - 989472 - H 100 -24.5 -3.01984 | opp_overlap 989470 989470, overlap 989461 989460 CAAGCGAACGATACA CCAGTTCGTTCGATCATCGCGCA CAAA TGCGCGATGATCGAACGCTCTGA GGGTTTGTCCGGGTT Bphy_6412 989691 - 990011 + | hypothetical protein Bphy_6413 991564 - 990038 - | diguanylate cyclase with PAS/PAC sensor TERM 714 990118 - 990092 - G 71 -12.3 -3.28712 | opp_overlap 990080, overlap 990093 CTTCGCGCTGTACAA CGCCTGATCCG CGCGC CGGATCAGGCC GTCGACGGAGTCGTC TERM 715 990117 - 990093 - G 77 -15.8 -2.57132 | opp_overlap 990080, overlap 990092 TTCGCGCTGTACAAC GCCTGATCCG CGCGC CGGATCAGGC CGTCGACGGAGTCGT TERM 716 991053 - 991027 - G 73 -12.2 -3.40403 | opp_overlap 991015, overlap 991031 GGGGCGGCACGAGAA TCCATGCGCCGC TTT GCGGCGCAAGCA GCGCGCCGATACCGA TERM 717 991049 - 991031 - G 77 -16 -2.61548 | opp_overlap 991015, overlap 991027 CGGCACGAGAATCCA TGCGCCGC TTT GCGGCGCA AGCAGCGCGCCGATA TERM 718 991107 - 991121 + g 72 -12.8 -3.05596 | TGCGCGATAGCGAGC CGCGGC AGC GCCGCG TTGCGTGACGCGATG TERM 719 991791 - 991766 - H 71 -6.8 -4.11216 | overlap 991751 991750 GCGGCACGTGCAAAA TTTGCAGCGC GCGCAA GCGCCGCAGA ACGCTGGGGACCAAA Bphy_6414 991813 - 992703 + | LysR family transcriptional regulator TERM 720 992958 - 992921 - f 87 -15.5 -3.25823 | gap 1, opp_overlap 992932 992933 CGCCCTCGACATCAA CCAGCCGCGGCTGCCGAC GCC GTTCGC-GCCGCGGCCGG CGCACGCCCTTATCT TERM 721 993412 - 993433 + G 76 -13.7 -3.14468 | gap 1 GTTCGGCCAGAGCGG GCCGTGGGCG TCG CGCCC-CGGC TTCGATCTGATGGCG Bphy_6415 992990 - 994174 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 722 994634 - 994673 + G 72 -8.5 -4.05788 | gap 1 GGCTGCATGCGGCGT TCGGCGTGCCGC-GCGTC AAGAA GATGCTGCTGCTTGCCGA TTTCCTTTCCGCCGA TERM 723 994779 - 994734 - g 77 -13.3 -3.34398 | gap 2, overlap 994732 994735 GGTCTGCGCGAAAGA TGCGCTCGACGCCGCCGCGCG CACGCT CGCGCAACGGC-TCG-GCGCG CTGTCGCAGGTCACA TERM 724 994778 - 994735 - g 81 -16.8 -2.60496 | gap 2, overlap 994734 994732 GTCTGCGCGAAAGAT GCGCTCGACGCCGCCGCGCG CACGCT CGCGCAACGGC-TCG-GCGC GCTGTCGCAGGTCAC Bphy_6416 994171 - 994935 + | enoyl-CoA hydratase/isomerase Bphy_6417 994970 - 996289 + | major facilitator transporter Bphy_6418 996554 - 996300 - | hypothetical protein TERM 725 996608 - 996635 + H 72 -9 -3.87815 | opp_overlap 996610, overlap 996610 TACCGTGGACGACCA GACGCCGGGCGG GTCG CCGTCCTGCGTG TTTCTAAGCATCCAG TERM 726 996610 - 996633 + H 74 -11.6 -3.52906 | opp_overlap 996610, overlap 996608 CCGTGGACGACCAGA CGCCGGGCGG GTCG CCGTCCTGCG TGTTTCTAAGCATCC TERM 727 997274 - 997260 - H 75 -5.6 -4.56961 | overlap 997262 AACAGGCACATAAAA TGCGGG CGT CCCGAA TGCGCCCCATCTCGC Bphy_6419 997309 - 999243 + | hypothetical protein Bphy_6420 1000408 - 999260 - | acyltransferase 3 Bphy_6421 1001160 - 1000546 - | hypothetical protein Bphy_6422 1002023 - 1001232 - | oxidoreductase molybdopterin binding Bphy_6423 1002623 - 1002027 - | cytochrome b561 Bphy_6424 1003430 - 1002777 - | DSBA oxidoreductase TERM 728 1002959 - 1002971 + g 73 -9.1 -3.87815 | AGTCCCCTCCCGTTA GCACG CTG CGTGC TTTCTCGCCGTCGAG Bphy_6425 1003607 - 1005652 + | small GTP-binding protein Bphy_6426 1006287 - 1005649 - | hypothetical protein TERM 729 1006224 - 1006207 - G 71 -7.7 -4.10953 | gap 1 ATCGATGAAATGAAA GCGCAGCG GAT CG-TGCGC GTCGGCGCCCTGCTC Bphy_6427 1006927 - 1006280 - | OmpA/MotB domain-containing protein Bphy_6428 1009362 - 1006924 - | hypothetical protein TERM 730 1007056 - 1007074 + g 83 -14.6 -3.28791 | overlap 1007067 GTACGCGAGTTGCTC GTCGCTGC GCA GCAGCGAC TTGTCGAGCGCCGCT TERM 731 1007587 - 1007610 + g 74 -10.2 -3.68936 | gap 1 GCAGATCGCCTGCTG GC-GGCTCGCG CTG CGCGCGCCCGC TTCTTCCCATTGCTG Bphy_6429 1010128 - 1009373 - | hypothetical protein TERM 732 1009816 - 1009773 - G 75 -8 -4.28994 | gap 1, overlap 1009774 TAGCACTGACGAAAA TCCGCGTAGTCGGCCTCGCGC TGG GC-CGATGCAGACTGCGCAGT CTGCGCATGCGAGGC TERM 733 1009871 - 1009909 + g 84 -14.4 -3.62597 | opp_overlap 1009858, overlap 1009874 CACGCTGTCGCCGGC GATCGCGTCGGCGAGCGC AGC GCGCACGCTGGCGCACTC TTGTTCGACGGTGCC TERM 734 1009874 - 1009906 + g 74 -14.7 -2.63252 | opp_overlap 1009858, overlap 1009871 GCTGTCGCCGGCGAT CGCGTCGGCGAGCGC AGC GCGCACGCTGGCGCA CTCTTGTTCGACGGT TERM 735 1010169 - 1010149 - R 74 -7.6 -4.18161 | gap 1 CAGAAATCTCGAAAA GGCAGCAGT TTAC AC-GCTGCC GGACCCGAAACCGCC Bphy_6430 1011321 - 1010305 - | alcohol dehydrogenase TERM 736 1011164 - 1011174 + g 72 -8.2 -4.00042 | opp_overlap 1011154 GGAAACTGCAGCCCC GGCC ACA GGCC TTCTTTCGTCAGCGA TERM 737 1011745 - 1011735 - R 70 -2.4 -4.74215 | overlap 1011736 AGACCAGGAAGAAAA CGGC AAG GCCT TCGTGCCCGCTCGCG Bphy_6431 1012832 - 1011885 - | hypothetical protein TERM 738 1012554 - 1012533 - G 70 -5.2 -4.41348 | gap 1 CGCCGTGTAAAGAAA CACGGCCAT ATGCG AT-GCCGTG GTCCAGCGCAGCCCT TERM 739 1012617 - 1012587 - G 74 -2.4 -4.78077 | overlap 1012588 GGCAACGAAAAGAAA CTCGGCGGCAAACA GGA TGCCGACCACCGAT CCCGGCCCGAGCGCG TERM 740 1012986 - 1013006 + r 73 -11.8 -3.04322 | TCGTTGAGCCGTTCG GCGGGCCT TTCGT GGGCCCGC TATTGAACCATTCCC Bphy_6432 1013625 - 1013116 - | hypothetical protein Bphy_6433 1014001 - 1013750 - | hypothetical protein TERM 741 1013969 - 1013948 - G 74 -11.5 -3.57144 | overlap 1013961 GCTTGCATGCGCAAA CGGGCTGGC AAAC GCCAGCACG GCCACGATGAGTGAG Bphy_6434 1014705 - 1013998 - | alcohol dehydrogenase TERM 742 1015294 - 1015312 + G 75 -4.5 -4.59853 | overlap 1015295 ATCAGGGGCGCGGCA TCGTCGG CGTGA TCGACGG TTTTTCGCCCCTTGG Bphy_6435 1014909 - 1015394 + | hypothetical protein Bphy_6436 1015411 - 1016328 + | Ap4A phosphorylase II Bphy_6437 1016432 - 1017076 + | toluene tolerance family protein TERM 743 1017106 - 1017077 - T 78 -11.4 -3.67597 | overlap 1017074 TCGGGCAGGCAATAA CGCATCTCACGC GTGAAT GCGTGAGCCGCG AACCACTTTGCATTC Bphy_6438 1017795 - 1017319 - | hypothetical protein TERM 744 1017609 - 1017636 + g 72 -11.2 -3.53012 | GAGGCGTTGCCGCGA CAGCCGCCGGGT CGAC ACCCGTCTGCTG TTTAGCCCACGACGC Bphy_6439 1018507 - 1018103 - | hypothetical protein Bphy_6440 1019292 - 1018570 - | multiple antibiotic resistance (MarC)-related protein TERM 745 1019115 - 1019129 + g 70 -2.7 -4.59089 | overlap 1019121 TGATCGATATGCTTC GCGCC AGAAA GGCTC TTTCTTTCTCCGTTG TERM 746 1019379 - 1019417 + r 100 -18.3 -3.05715 | gap 1 TCCTCCGATGGCTTC GTCG-CAGGTCATGGCGA GCTA TCGCCACGACCTGCCGAC TTGGATACACGCGTT TERM 747 1019568 - 1019529 - R 100 -13.4 -4.80882 | AGCCGAGACCAAAAA GAGCGGCGCCGACGGCCC ATAC GCGCGGTTGTCGCCGCTC CGCATGACCCGATGC Bphy_6441 1020609 - 1019671 - | carbamate kinase Bphy_6442 1021714 - 1020704 - | ornithine carbamoyltransferase TERM 748 1021517 - 1021550 + g 95 -16.1 -4.09685 | gap 1 CTGATCGTGCGCGGC GACCTCGAACGCGCAC CGC GTGCGGG-TCGAGGTC TTTTCGAAGATCAGC Bphy_6443 1023008 - 1021755 - | arginine deiminase Bphy_6444 1023563 - 1023297 - | hypothetical protein TERM 749 1024380 - 1024352 - g 76 -13.9 -3.10905 | overlap 1024343 1024379 CCACAAGCTATTGAA GGTCGTCGCCATC GTG GATGGCAACGACG CGCAGAGCGGCGAAT Bphy_6445 1024293 - 1026656 + | ornithine decarboxylase TERM 750 1026734 - 1026711 - g 100 -9 -5.54192 | gap 1, opp_overlap 1026711 1026715, overlap 1026729 ATCAACCGAAAAAAA TGAACGTC-GT GCA ACTGACGTTCA TCGTTACCGTGAACA Bphy_6446 1026689 - 1028941 + | amino acid permease-associated region TERM 751 1029423 - 1029436 + G 76 -9.5 -4.11371 | overlap 1029403 TGCCGCCGATGTTCG GCGCG CTCG CGCGC TTTTCGAAGGTATTC Bphy_6447 1028960 - 1031275 + | lysine decarboxylase TERM 752 1031310 - 1031342 + T 71 -7.6 -3.95073 | opp_overlap 1031276, overlap 1031312 CGCTTAGAACCTGCT GCGCCGGCTCGGAT CGCGC ATCGGATCCGGCTC TTTCTGCGTCTGCCG Bphy_6448 1031804 - 1031298 - | putative lipoprotein Bphy_6449 1032417 - 1031830 - | putative lipoprotein TERM 753 1032387 - 1032349 - G 76 -13.9 -3.05596 | gap 2, opp_overlap 1032349 CATCGCCGTAGGGAA GCCTGCCGGTGCCAGTCCT GCG AGGGCTAGC-CCGGC-GGC GCTGGATTGCAAGAA Bphy_6450 1033023 - 1032493 - | hypothetical protein TERM 754 1032786 - 1032772 - G 70 -2.1 -4.66833 | gap 1, overlap 1032775 CTTGAACTGCAAAAA CAGCGG CTTT CCG-TG CCGATCCCTGCCGCG Bphy_6451 1034239 - 1033208 - | hypothetical protein Bphy_6452 1034653 - 1034273 - | Ion transport 2 domain-containing protein Bphy_6453 1035712 - 1034666 - | membrane protein Bphy_6454 1036880 - 1035720 - | secretion protein HlyD family protein Bphy_6455 1038427 - 1036877 - | RND efflux system outer membrane lipoprotein TERM 755 1037775 - 1037785 + g 77 -5.4 -4.59109 | TCATCTGTCTCTCCG CTCT TGA AGAG TTTTTGCGCGATATC Bphy_6456 1039549 - 1038446 - | hypothetical protein TERM 756 1038911 - 1038931 + g 70 -14.1 -2.59431 | overlap 1038907 GCGAATCGTGGCCGT GCACAGATC GGC GATCTGTGC TCCGTTGTCCGGGCC Bphy_6457 1040195 - 1039938 - | hypothetical protein Bphy_6458 1040834 - 1040628 - | 4-oxalocrotonate tautomerase Bphy_6459 1041082 - 1040852 - | 4-oxalocrotonate tautomerase Bphy_6460 1042522 - 1041107 - | MmgE/PrpD family protein TERM 757 1041739 - 1041764 + g 72 -8.9 -4.11692 | ATTTCTTCATCACCG TCTGGTGCACG ATGT CGAGCGCCGGA TTTTCCCAATCGATA TERM 758 1042721 - 1042759 + r 86 -8.7 -4.65895 | overlap 1042722 1042723 CGATTCAGACGATGT GTTGTGCAACGCGCGCC CTATT GGCGAGCGTTGCGCCGG TTTTTGCATGCGACG TERM 759 1042722 - 1042758 + r 76 -12.2 -3.39216 | overlap 1042721 1042723 GATTCAGACGATGTG TTGTGCAACGCGCGCC CTATT GGCGAGCGTTGCGCCG GTTTTTGCATGCGAC TERM 760 1042723 - 1042757 + r 74 -13.5 -2.63208 | overlap 1042722 1042721 ATTCAGACGATGTGT TGTGCAACGCGCGCC CTATT GGCGAGCGTTGCGCC GGTTTTTGCATGCGA Bphy_6461 1043516 - 1042884 - | hypothetical protein TERM 761 1043157 - 1043136 - G 85 -5 -5.06414 | overlap 1043139 CGCGCGCAATAAAAA CACGCCCG CGTCGC CGGGCCCG CCTGCGACGATCTCA Bphy_6462 1043666 - 1044520 + | alpha/beta hydrolase fold protein Bphy_6463 1045605 - 1044814 - | hypothetical protein Bphy_6464 1046378 - 1045608 - | protein of unknown function DUF899 thioredoxin family protein TERM 762 1046628 - 1046640 + G 71 -10.5 -3.64703 | opp_overlap 1046616 AAGCGCTTGTGCGCG GCGCG GCA CGCGC TTTCGGTGCGAGGGA TERM 763 1046752 - 1046697 - g 74 -11.1 -3.66178 | overlap 1046698 TCGCGGAAGCGGAAA TCGCACTCGCGTCGCGCGACCTCG-GG TGGC CCGCGAAATCGCTCGATGCG-GCGCGC AAGACGCTCGAAGCG TERM 764 1046751 - 1046698 - g 77 -14.6 -2.79492 | overlap 1046697 CGCGGAAGCGGAAAT CGCACTCGCGTCGCGCGACCTCG-GG TGGC CCGCGAAATCGCTCGATGCG-GCGCG CAAGACGCTCGAAGC TERM 765 1046787 - 1046817 + G 72 -8.9 -4.02108 | gap 1 GCGACCGTCTGAACG CTGCGCAC-GCGCG CCAA CTCGCAGTGCGCCG TTTGCTTCTGATCGG TERM 766 1046951 - 1046916 - g 73 -11.8 -3.39895 | gap 1 CCGCCCACGAACTAA TCGTG-GCGGGCATCGC GAT GCGGCGCCTGCACACGA AAGCTGCGCGCGCGG TERM 767 1047000 - 1046954 - g 81 -12.4 -3.83026 | gap 4 CGCCTGCACACGAAA GC-TGCGCGCGCGGCGCTTGCGCG AGC CGGGCA-G-GCCGCGCG-GCATGC GGGGATTGCCGGTCT TERM 768 1047067 - 1047033 - g 71 -10.5 -3.66178 | opp_overlap 1047032 1047029 CGGCGGAAGTCGAAA GCGCGCAGCGCCTGC TGAAT GCGCCCGCCGCGCGC CTGCTTTCGCGCGGC Bphy_6465 1046465 - 1047685 + | hypothetical protein Bphy_6466 1047724 - 1048395 + | hypothetical protein Bphy_6467 1049107 - 1048409 - | phosphoesterase PA-phosphatase related TERM 769 1049328 - 1049313 - H 75 -4 -4.8048 | gap 1, overlap 1049316 TCCGCACATCAAAAA CGATCTC AGG GAGA-CG ATCATGATGAAGTCG TERM 770 1049666 - 1049681 + G 77 -11.8 -3.64703 | opp_overlap 1049625 AGGGCCTCGAACGCG CCGGCG ACCG CGCCGG TTTGCATGCACAAGC Bphy_6468 1049332 - 1049769 + | hypothetical protein TERM 771 1049765 - 1049746 - T 78 -8.6 -4.18762 | gap 1, overlap 1049749 AATGCCTACGGAAAA GATGCGCGT AGC ACGCGC-TC GTAGCGCGATCGATC TERM 772 1049785 - 1049820 + T 73 -13.2 -2.77899 | overlap 1049782 CGCGATCGATCAGGA TCAGCCGCTTGCACCG CGAA CAGCGCAAGCGGCTGC TAGTTCGTGCGCCGA Bphy_6469 1050461 - 1049820 - | two component LuxR family transcriptional regulator Bphy_6470 1051873 - 1050458 - | integral membrane sensor signal transduction histidine kinase Bphy_6471 1052077 - 1054155 + | carbon starvation protein CstA Bphy_6472 1054168 - 1054374 + | hypothetical protein Bphy_6473 1054863 - 1054522 - | alkylphosphonate utilization operon protein PhnA Bphy_6474 1056114 - 1055131 - | LysR family transcriptional regulator Bphy_6475 1056991 - 1056182 - | hypothetical protein Bphy_6476 1057902 - 1056988 - | extracellular solute-binding protein Bphy_6477 1058425 - 1057991 - | putative methanol dehydrogenase-like protein, cytochrome cL (XoxG) Bphy_6478 1060421 - 1058601 - | methanol/ethanol family PQQ-dependent dehydrogenase TERM 773 1060201 - 1060154 - G 71 -12.9 -3.00022 | GCGAGTGGATATACA TCGTGTCGC-CGATCACGAGAGG CGAG CCT-TCGTGACCGCGCAACACGC CCGTCGACATCGTCC Bphy_6479 1060734 - 1060462 - | hypothetical protein Bphy_6480 1060788 - 1061174 + | transcriptional coactivator/pterin dehydratase TERM 774 1061181 - 1061213 + F 100 -22.1 -3.31461 | AAGAGTTGATGGTCC GCCCCGCGTTCGC TATCGGT GCGAACGCGGGGC TTCTCGCAATGCGTG TERM 775 1061380 - 1061369 - f 71 -7.2 -4.11216 | overlap 1061370 GCCTGAGGTCGAAAA GCGC TGTC GCGC CGATCCGCGCGGCCG TERM 776 1062431 - 1062455 + G 79 -15 -3.03124 | gap 1 CGTGTGTTCCGTGAC GCGCG-GCCGC AATT GCGGCGCGCGC TATTACGCCGTCCAG Bphy_6481 1061433 - 1062500 + | beta-ribofuranosylaminobenzene 5'-phosphate synthase Bphy_6482 1062588 - 1063514 + | methylene-tetrahydromethanopterin dehydrogenase TERM 777 1064025 - 1064005 - gf 74 -11.1 -3.53224 | opp_overlap 1064017 GACTGGCTGCGCAAA GCCGCCG ACGGCTG CGGCGGC ACGCATATCGTTCGA Bphy_6483 1063534 - 1064757 + | hypothetical protein Bphy_6484 1064732 - 1065850 + | methenyltetrahydromethanopterin cyclohydrolase Bphy_6485 1065847 - 1066848 + | alpha-L-glutamate ligase Bphy_6486 1066835 - 1067710 + | triphosphoribosyl-dephospho-CoA protein TERM 778 1067795 - 1067776 - f 79 -7 -4.56597 | opp_overlap 1067790 GTCCCCTTCGAAAAA CGCGCTGC GGTC GCCACGCG TCGCGAGTTCGTCCC Bphy_6487 1067844 - 1068353 + | formaldehyde-activating enzyme TERM 779 1068379 - 1068436 + F 100 -29.8 -3.9009 | gap 1, opp_overlap 1068374 1068375, overlap 1068381 1068429 TGCATCGAAAGCCGT GTCGCGC-GCGCGCGCCGCAGCGGGCC GTCGA GGTCCGCCGCGGCGCGCGCCGCGCGTG TTTCTCCCGTGCGTT TERM 780 1068381 - 1068434 + F 100 -36.8 -3.53733 | gap 1, opp_overlap 1068374 1068375, overlap 1068379 1068429 CATCGAAAGCCGTGT CGCGC-GCGCGCGCCGCAGCGGGCC GTCGA GGTCCGCCGCGGCGCGCGCCGCGCG TGTTTCTCCCGTGCG Bphy_6488 1068493 - 1068906 + | hypothetical protein Bphy_6489 1069456 - 1068986 - | dihydroneopterin aldolase TERM 781 1069402 - 1069344 - G 89 -18.8 -2.8655 | gap 2, overlap 1069342 TCGATGTAGACGATA TCGAGCGCGGCGCC-GC-CGCGCCGCCG CTCGT CGGGGTCGCGCGCTGGCCGCGCGCTCGA CGGCAACACGACCGT TERM 782 1070836 - 1070823 - g 83 -9.5 -4.4078 | overlap 1070825 CCGCGCGAAGCAAAA CCCGC TGCC GCGGG CCTCGACAAGCTCTC Bphy_6490 1069788 - 1071893 + | Fis family GAF modulated sigma54 specific transcriptional regulator Bphy_6491 1071883 - 1072500 + | flavoprotein TERM 783 1072638 - 1072687 + G 71 -12.8 -3.02511 | gap 1, opp_overlap 1072621, overlap 1072672 CGCCGGCGCGTCGCG TTGCCGCTGCGCGCGGACCGG ATGATCGTC CCGGGCCGC-TGCCGCGGCGA TCTTGCGGCGCTGAG Bphy_6492 1072479 - 1073867 + | dihydropteroate synthase DHPS TERM 784 1073980 - 1073940 - T 70 -3.8 -4.61482 | gap 1 GCTGTCAAAAAAGAA GCTGACGGCCCCGCG-CGG GGTA CGGTCTACAGGCCGTCAGC CAACACACGACTGAG Bphy_6493 1074901 - 1074029 - | phosphoribulokinase Bphy_6494 1076042 - 1074939 - | inositol phosphatase/fructose-16-bisphosphatase TERM 785 1075784 - 1075810 + g 72 -11.5 -3.54459 | gap 1 CGGGCTTCCCGGCAT CGTCCGCGCCGC GGTT GCGG-GCGGCCG TTTCGGCCAGCTTGC Bphy_6495 1077041 - 1076052 - | CbbX protein TERM 786 1076925 - 1076894 - G 77 -13 -3.31144 | overlap 1076905 1076908 TCTTCACGGGCACAA GCCCGACGAGATCA CGGT CGAGCTCGTCGAGC ACGCCTGCAATGCCC Bphy_6496 1077499 - 1077038 - | ribulose-bisphosphate carboxylase Bphy_6497 1079043 - 1077538 - | ribulose-bisphosphate carboxylase TERM 787 1079152 - 1079170 + H 85 -3.1 -5.40072 | overlap 1079153 TGTAGGTGGCGACGT GCGTGAA GTGAA TTCACGA TTTTTTTCAGCAGGC TERM 788 1079522 - 1079567 + H 100 -11.9 -4.61747 | gap 1, overlap 1079520 CACGAGGTGATAGTC GCCGCTCGGCGGCGAGGG TGGTCGTCTTT CCCTT-CCGCAGAGCGGC TTTTCTGATTCTTGC Bphy_6498 1079770 - 1080375 + | hypothetical protein Bphy_6499 1080400 - 1081098 + | hypothetical protein Bphy_6500 1081722 - 1081132 - | aspartate/glutamate/uridylate kinase Bphy_6501 1082984 - 1081890 - | H4MPT-linked C1 transfer pathway protein TERM 789 1083011 - 1082954 - G 95 -14.9 -4.13767 | gap 3, opp_overlap 1082978 CGTCCCAGCCGAAAA CGGCAGCCGCGCTCATGATGCCGTTCCG CATGC CGG--CAGCCTCCCGAGCGCGGC-GCCG CCGCCGGCAGCGGCT Bphy_6502 1084039 - 1082966 - | hypothetical protein Bphy_6503 1084056 - 1084850 + | histidine biosynthesis protein TERM 790 1086168 - 1086219 + G 71 -13.6 -2.66733 | overlap 1086180 CCGCTCGACCACGAT CCGTATCGGTATCGCACGGAGCGG CTGC TCGCTGCGCGCGAAGCCGATGCGC TGCTGTGGATTGCGA Bphy_6504 1085142 - 1086551 + | formyltransferase/hydrolase complex subunit B(FhcB) Bphy_6505 1086548 - 1088248 + | formylmethanofuran dehydrogenase subunit A TERM 791 1088634 - 1088644 + G 70 -2.4 -4.65895 | overlap 1088627 TCGCGCCCCTCGGCG GCTC GCT GCGC TTTTTCGGTGACGGC Bphy_6506 1088261 - 1089220 + | formylmethanofuran--tetrahydromethanopterin N-formyltransferase Bphy_6507 1089217 - 1090077 + | formylmethanofuran dehydrogenase subunit C Bphy_6508 1090109 - 1090675 + | cytochrome B561 Bphy_6509 1090746 - 1091666 + | coenzyme PQQ biosynthesis protein B Bphy_6510 1091704 - 1092411 + | coenzyme PQQ biosynthesis protein C Bphy_6511 1092408 - 1092698 + | coenzyme PQQ synthesis D TERM 792 1092976 - 1092996 + G 75 -12.5 -3.48593 | CTCGAAGCGCTTGTC GCCGAGGCG CAC CGGCTCGGC TTCTATACGAACCTC Bphy_6512 1092703 - 1093920 + | coenzyme PQQ biosynthesis protein E Bphy_6515 1095631 - 1094474 - | YVTN beta-propeller repeat-containing protein Bphy_6516 1095973 - 1095797 - | hypothetical protein Bphy_6517 1096571 - 1096386 - | hypothetical protein Bphy_6518 1098154 - 1096700 - | heavy metal sensor signal transduction histidine kinase TERM 793 1097916 - 1097935 + g 82 -6.3 -4.7254 | opp_overlap 1097900, overlap 1097908 1097913 1097918 ACACTGCTGCCGTCG CGCGGCG TCATGT CGCCGAG TTTTTCCTGCGCGAT Bphy_6519 1098837 - 1098151 - | two component heavy metal response transcriptional regulator Bphy_6520 1100417 - 1098915 - | RND efflux system outer membrane lipoprotein TERM 794 1100120 - 1100172 + g 85 -12.1 -4.07568 | gap 4 GGGCGCGCGTGTTGG CCAG-CG-TCG-CGCGCGCCTGTGCGT AGT GCGCGCTGGC-CGCGACGAGCGTCTGG TTTTGCGCGAGCGCC Bphy_6521 1101646 - 1100414 - | RND family efflux transporter MFP subunit Bphy_6522 1104875 - 1101639 - | acriflavin resistance protein TERM 795 1102916 - 1102899 - G 72 -11.3 -3.53012 | CTCGGTGCCCGGAAA GCGCTGT GGCA ACAGCGC GCGCAAGCGGTCGAT TERM 796 1103114 - 1103128 + g 77 -8.5 -4.20516 | overlap 1103127 CCCGTTCGACCTGAT CGGCG AGCCG CGCCG TTTCTTCGATGCGCG TERM 797 1103547 - 1103529 - G 78 -3.9 -4.72272 | gap 1 GCCCGTCAGGAAAAA CATCG-GT ACGA ACACGATG CAGATGCAGAGCGTC TERM 798 1105086 - 1105096 + H 71 -8.2 -4.07687 | GCGACAAGGACCTCG CGCG GCA CGCG TTTTGCAGAACCGGT Bphy_6523 1105163 - 1105771 + | CDP-diacylglycerol--serine O-phosphatidyltransferase Bphy_6524 1106068 - 1105784 - | hypothetical protein TERM 799 1106284 - 1106261 - H 100 -14 -5.38497 | ATGGAAAGCAAAAAA GGCTATGTGA AAAC TCACATAGCC GAAGTCCAGAATCAT TERM 800 1106400 - 1106410 + H 70 -4 -4.57787 | GAACCTCGGCTGACC GTTT CTC AAAC TTTCTTTCCTCTTCT Bphy_6525 1106657 - 1107418 + | GntR domain-containing protein TERM 801 1107462 - 1107436 - T 87 -15.2 -3.33696 | opp_overlap 1107441, overlap 1107441 CTTCCGGTCAACCAA TAAAAGCGGCCC GCA GGGCCGCTTTTT TTCATCGATCACGCG TERM 802 1107441 - 1107457 + T 100 -15.1 -5.53991 | opp_overlap 1107441 1107436 GGTCAACCAATAAAA GCGGCCC GCA GGGCCGC TTTTTTTCATCGATC TERM 803 1107457 - 1107441 - T 100 -15.1 -4.78572 | opp_overlap 1107441, overlap 1107436 GGTCAACCAATAAAA GCGGCCC GCA GGGCCGC TTTTTTTCATCGATC Bphy_6526 1109054 - 1107471 - | aldehyde dehydrogenase TERM 804 1107709 - 1107767 + g 76 -13.7 -3.05463 | gap 1, opp_overlap 1107731 1107732, overlap 1107732 1107753 CCGTTGATGAGCAGG CGCCCCGCCTTG-CGCTCGAGAATCGGC ACGA GCCGTTTCGCGAGCGGCACGTCGTCGCG TTCCATCGCGAGGGT Bphy_6527 1109286 - 1110071 + | 2-dehydro-3-deoxyglucarate aldolase Bphy_6528 1110114 - 1111007 + | 2-hydroxy-3-oxopropionate reductase TERM 805 1111660 - 1111675 + G 70 -5.4 -4.3739 | gap 1, overlap 1111663 GTATCGAGCGAATTT CGTGCGA CGG TCGC-CG TTTTATCGCGCGATA TERM 806 1111969 - 1111979 + G 74 -4.6 -4.46926 | GGTTTCAGGATCGAC CCGT CAG GCGG TTTTCTGGTCGCGTG Bphy_6529 1111039 - 1112118 + | 6-phosphogluconolactonase TERM 807 1112165 - 1112179 + F 79 -7.1 -4.58395 | TTGTCGATTTTCACC TGCCC ACATA GGGCA TTTTTGGGAACTCAC Bphy_6530 1112210 - 1113559 + | glucarate dehydratase Bphy_6531 1113642 - 1114559 + | 5-dehydro-4-deoxyglucarate dehydratase TERM 808 1114570 - 1114585 + T 78 -3.2 -5.14563 | gap 1, overlap 1114570 1114570 AGTAATCTTTTTGCA CC-TGGC GGC GCCGCGG TTTTTTGCTGCGCCG TERM 809 1114594 - 1114626 + T 100 -14.7 -4.43681 | overlap 1114570 GCCGCGGTTTTTTGC TGCGCCGCGCTGGTG TTG CCCCTGCGCGGGGCA TTTTACTGTTGCATG Bphy_6532 1115101 - 1114943 - | PAAR repeat-containing protein Bphy_6533 1116086 - 1115181 - | LysR family transcriptional regulator Bphy_6534 1116192 - 1117139 + | aldo/keto reductase Bphy_6535 1118310 - 1117102 - | major facilitator transporter TERM 810 1119345 - 1119362 + G 73 -5.5 -4.35116 | gap 1, overlap 1119344 1119345 TCCGCCGTCGAAGGG CGCG-GCG TCA CGCGCGTG TTTTCGTATCACGTC Bphy_6536 1118640 - 1119566 + | LysR family transcriptional regulator TERM 811 1119600 - 1119568 - f 72 -9.7 -3.74251 | opp_overlap 1119569 1119589 1119590, overlap 1119557 1119569 CAGACCGCGATTAAA CCGCGCCGCGGAAGA ATG TCTGCCGCGTCACGT GGATTCTCTCTGTCG TERM 812 1119599 - 1119569 - f 73 -13.2 -2.84229 | opp_overlap 1119569 1119589 1119590, overlap 1119557 1119568 AGACCGCGATTAAAC CGCGCCGCGGAAGA ATG TCTGCCGCGTCACG TGGATTCTCTCTGTC Bphy_6537 1119684 - 1120394 + | short-chain dehydrogenase/reductase SDR TERM 813 1121490 - 1121526 + G 72 -3.5 -4.64861 | GGCCACCACGACATT CGCCGTGTTGCAGGCGG TCG CCGCGTATGGCATGTCG TTTCTTTTCACGCAA Bphy_6538 1120435 - 1121649 + | major facilitator transporter TERM 814 1122258 - 1122302 + G 75 -7.9 -4.30576 | gap 3 GCATACGCGGTACGT TCTTC-GCGG-GCGGCG-CGGT GATC GCCGTCGCCGCACTGCTGACGA TTTTCGTCGTCAGGG TERM 815 1122850 - 1122880 + G 79 -2.6 -5.00616 | gap 1, opp_overlap 1122852, overlap 1122852 1122853 GGTGATCGGCGGAGA GATCGCCGTGCAT CTCGGC ATGCACG-CGGTG TTTTTTGCGACGGGG Bphy_6539 1121684 - 1122946 + | major facilitator transporter Bphy_6540 1123053 - 1123367 + | antibiotic biosynthesis monooxygenase TERM 816 1124407 - 1124389 - g 71 -8 -4.07687 | overlap 1124390 1124393 ACGGCCCGCCTAAAA CCGAGCGC GTG ACGCGCGG CCGCGCGACAGGATA Bphy_6541 1123383 - 1125344 + | enterotoxin Bphy_6542 1127258 - 1125360 - | Beta-galactosidase TERM 817 1127044 - 1127066 + g 76 -9.1 -4.1721 | overlap 1127029 CACATCACGTATAGC GCGATGGTG TTCAT CCCCATCGC TTTTGCCATCTGAAT Bphy_6543 1128247 - 1127249 - | hypothetical protein Bphy_6544 1128560 - 1128979 + | hypothetical protein TERM 818 1129020 - 1129060 + T 76 -3.1 -5.00616 | opp_overlap 1129025 1129031, overlap 1129025 CACGAAAGTCCGCTA TAAAACCAAAAGCCCGTCG TAC TGACGGGCCTCCGGTTGTC TTTTTTGGAAAACAA TERM 819 1129025 - 1129055 + T 71 -7.4 -4.18465 | opp_overlap 1129025 1129031, overlap 1129020 AAGTCCGCTATAAAA CCAAAAGCCCGTCG TAC TGACGGGCCTCCGG TTGTCTTTTTTGGAA TERM 820 1129055 - 1129025 - T 95 -13.3 -4.37658 | opp_overlap 1129025 1129020, overlap 1129031 AAGTCCGCTATAAAA CCAAAAGCCCGTC GTACT GACGGGCCTCCGG TTGTCTTTTTTGGAA TERM 821 1129049 - 1129031 - T 100 -11.7 -4.73108 | opp_overlap 1129025 1129020, overlap 1129025 GCTATAAAACCAAAA GCCCGTC GTACT GACGGGC CTCCGGTTGTCTTTT Bphy_6545 1129984 - 1129220 - | cobyrinic acid ac-diamide synthase Bphy_6546 1130203 - 1130430 + | hypothetical protein Bphy_6547 1130562 - 1131368 + | alpha/beta hydrolase BEM46 Bphy_6548 1132578 - 1131388 - | aminotransferase class I and II TERM 822 1131683 - 1131647 - G 82 -7.2 -4.68724 | gap 1 GCATGCAACAGAAAA TCGCGCCGCGC-CTGCC ACTC GGCAACGCACTGTGCGA CGCCATCGTCCGTGC Bphy_6549 1132922 - 1132617 - | hypothetical protein Bphy_6550 1133422 - 1135140 + | metallophosphoesterase Bphy_6551 1135980 - 1135195 - | stationary-phase survival protein SurE TERM 823 1136026 - 1135983 - R 78 -14.8 -2.64794 | gap 1, opp_overlap 1135978 1136024, overlap 1135993 1136025 CGGAAGTGGACATGA TGTGCGATAAGCGTAGCGG AGGGATG CCGCTACGC-TACCACACA GCGAAGTTTTCGCTG TERM 824 1136017 - 1135993 - R 79 -12.9 -3.30441 | opp_overlap 1135978, overlap 1135983 CATGATGTGCGATAA GCGTAGCGG AGGGATG CCGCTACGC TACCACACAGCGAAG Bphy_6552 1137323 - 1136103 - | porin Bphy_6553 1137786 - 1138487 + | GntR family transcriptional regulator TERM 825 1139718 - 1139678 - g 100 -27.7 -3.26545 | gap 1, overlap 1139657 1139655 GCGATATAGGACTAA CGCTGCGCGCAGCGGGCG CACCGT CGCCCGCTGCGCGC-GCG CTGATCGACGCGATA Bphy_6554 1138537 - 1139784 + | LysR family transcriptional regulator Bphy_6555 1141002 - 1140259 - | acetoacetyl-CoA reductase Bphy_6556 1141717 - 1141193 - | hypothetical protein Bphy_6557 1143072 - 1142140 - | hypothetical protein Bphy_6558 1143825 - 1143193 - | two component LuxR family transcriptional regulator TERM 826 1143735 - 1143764 + g 71 -13.6 -2.7044 | overlap 1143732 1143725 1143751 CTTGCGCCGCTTCCG CCGCGACGACGA TATCGT TCGTCGTCGCGA TGATCTGCTTGAGTC Bphy_6559 1145447 - 1143822 - | multi-sensor signal transduction histidine kinase Bphy_6560 1147606 - 1145444 - | integral membrane sensor hybrid histidine kinase Bphy_6561 1148033 - 1147704 - | hypothetical protein Bphy_6562 1148345 - 1148593 + | hypothetical protein Bphy_6563 1148652 - 1148861 + | hypothetical protein Bphy_6564 1148872 - 1149180 + | hypothetical protein Bphy_6565 1149703 - 1149218 - | UspA domain-containing protein Bphy_6566 1150159 - 1151043 + | GCN5-related N-acetyltransferase Bphy_6567 1151047 - 1151973 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_6568 1152136 - 1153545 + | aminotransferase class-III Bphy_6569 1153590 - 1154087 + | AsnC family transcriptional regulator Bphy_6570 1154998 - 1154081 - | LysR family transcriptional regulator Bphy_6571 1155117 - 1156196 + | tartrate dehydrogenase Bphy_6572 1156235 - 1157707 + | aldehyde dehydrogenase TERM 827 1157951 - 1157984 + G 83 -9.5 -4.42386 | gap 1, opp_overlap 1157939, overlap 1157940 ACATCGACGCATATG CGCGCTTCGATCCGTC GAA GCCGGAT-GCGGCGCG TTTTGTCGATCAGGA Bphy_6573 1157704 - 1158681 + | succinylglutamate desuccinylase/aspartoacylase Bphy_6574 1158722 - 1159066 + | protein of unknown function DUF861 cupin_3 TERM 828 1160071 - 1160056 - g 72 -9 -4.09685 | overlap 1160063 CGGCATCCTGCAAAA CACGCA ATTG TGCGTG CTAAAGAACGCGCCC Bphy_6575 1159283 - 1160338 + | extracellular solute-binding protein TERM 829 1160361 - 1160392 + F 100 -15.2 -4.43477 | gap 1 GCCCCATTCCTTCAC GCGCCCG-CAGGAAC CTC GTTCATGGCGGGCGC TTTTCATTGCATCGG TERM 830 1161496 - 1161509 + G 74 -2.3 -4.79352 | GCATTCGGTCGGCTA TCGGC TCGG GACGA TTTTCTTCTGGGTCA Bphy_6576 1160399 - 1162150 + | glucose-methanol-choline oxidoreductase Bphy_6577 1163712 - 1162285 - | aldehyde dehydrogenase TERM 831 1163686 - 1163640 - G 74 -12.9 -3.18264 | gap 1 CCGTGCAGGGATCAA CGACAGGCAGACGGGCCGTGCC GGAC GGCTCGACCCACGCGCC-GTCG ATATAGAACTTCAGG Bphy_6578 1164530 - 1163733 - | binding-protein-dependent transport systems inner membrane component Bphy_6579 1165435 - 1164527 - | binding-protein-dependent transport systems inner membrane component Bphy_6580 1166763 - 1165435 - | FAD dependent oxidoreductase TERM 832 1165502 - 1165468 - G 75 -14.9 -2.69246 | gap 1, overlap 1165463 GAGAAACTGATACCA CGCAGCGACGAGCCGG ACAC CCGGCGCG-CGCAGCG AATGAAACGGCACAG Bphy_6581 1167476 - 1166766 - | HAD family hydrolase Bphy_6582 1168628 - 1167546 - | spermidine/putrescine ABC transporter ATPase subunit TERM 833 1167596 - 1167626 + g 78 -14.1 -3.18264 | opp_overlap 1167549 1167547 1167614 GCGCAACCGTCATGT GCGCGCCCGGCG-AT GGA ATGCGCCGG-CGCGC TTCGTGGCTGCCGGG TERM 834 1168214 - 1168169 - G 81 -16.2 -3.01712 | gap 1, opp_overlap 1168202, overlap 1168172 GTTGCGGCTCGAACA CCATCGCGCGGGCAAGCGCCA CACGC TGACGCT-GCCCGCCCGACAG CTGGCTGATATTGCG TERM 835 1168211 - 1168172 - G 81 -16.5 -2.73875 | gap 1, opp_overlap 1168202, overlap 1168169 GCGGCTCGAACACCA TCGCGCGGGCAAGCGCCA CACGC TGACGCT-GCCCGCCCGA CAGCTGGCTGATATT TERM 836 1169660 - 1169644 - g 75 -6.5 -4.33819 | opp_overlap 1169646, overlap 1169646 ATCATTGAGAAGAAA TACCCGA AGC TCGGGTT GTCTGATGCTATGCG TERM 837 1169658 - 1169646 - g 71 -9.1 -3.76888 | opp_overlap 1169646, overlap 1169644 CATTGAGAAGAAATA CCCGA AGC TCGGG TTGTCTGATGCTATG Bphy_6583 1168729 - 1169700 + | LysR family transcriptional regulator Bphy_6584 1170186 - 1169848 - | AraC family transcriptional regulator Bphy_6585 1171352 - 1170183 - | FAD dependent oxidoreductase TERM 838 1171303 - 1171293 - G 93 -4.6 -5.24129 | overlap 1171295 GCGCCGCAGAAAAAA CGCC GTC GACG TCCCGACGATTCCAC Bphy_6586 1172779 - 1171349 - | BFD/(2Fe-2S)-binding domain-containing protein Bphy_6587 1173078 - 1172758 - | putative NAD(FAD)-dependent dehydrogenase Bphy_6588 1174910 - 1173075 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 839 1173602 - 1173623 + g 84 -6.5 -4.82901 | gap 1, opp_overlap 1173581, overlap 1173603 GCTTCGCGGCGAGCG C-GCGCGCCA GGT TGACGCGCTG TTTTTGTCCGCCCGA TERM 840 1173603 - 1173621 + g 78 -10.2 -4.03995 | opp_overlap 1173581, overlap 1173602 CTTCGCGGCGAGCGC GCGCGCCA GGT TGACGCGC TGTTTTTGTCCGCCC TERM 841 1174796 - 1174812 + g 71 -4.3 -4.56597 | overlap 1174798 CCGACTCGCCGATCA GCGCGAG CAC TTCGCCC TTTTTCACCGAGAAG Bphy_6589 1175860 - 1174907 - | binding-protein-dependent transport systems inner membrane component TERM 842 1175481 - 1175465 - G 79 -5.7 -4.60487 | GACGAGGCCGAAAAA CGTGCCG ATG CAGCTCG CGAGCACCGTCGCCG TERM 843 1175745 - 1175717 - G 77 -8.8 -4.21194 | gap 1, opp_overlap 1175732 GCCGAGCAGCGAAAA GCGGCTCAC-GAG ACGG CGCAGCGAGCCGC GCTTTGCAACTTGCG Bphy_6590 1176813 - 1175857 - | binding-protein-dependent transport systems inner membrane component Bphy_6591 1178503 - 1176881 - | extracellular solute-binding protein Bphy_6592 1179870 - 1178596 - | FAD dependent oxidoreductase TERM 844 1179200 - 1179238 + g 71 -8.1 -4.18494 | opp_overlap 1179181 1179183, overlap 1179188 1179203 TGGTGCGCGCGCAGC GTACCGCG-CGCCGATTCG ATC CGG-TAGGCGCCGCGGTCC TTTTCGATCAGCGTG Bphy_6593 1180579 - 1179911 - | haloacid dehalogenase, type II TERM 845 1180648 - 1180637 - R 72 -5.8 -4.4261 | overlap 1180641 GGCGGAACAGGAAAA CGCA TCCC TGCG GAAAATTTAACCAGT Bphy_6594 1182261 - 1180783 - | aldehyde dehydrogenase TERM 846 1181847 - 1181875 + g 74 -13.1 -3.29144 | TGCCGAGATGATCGT GATCGGTCGCGGC GAC GTCGCCGCCGATC TTGTCGGCGAACTCC TERM 847 1182349 - 1182337 - H 80 -2.6 -5.28176 | TTCACCGACAAAAAA GCGC ACACA GCAC AATTCGCGCGTTCTC Bphy_6595 1182474 - 1183370 + | GCN5-related N-acetyltransferase TERM 848 1183424 - 1183389 - T 100 -26.2 -3.17075 | overlap 1183340 CGGCCGTCAACGCAA GCATGCCCGCGGCGCC CGAA GGCGACGCGGGCATGC ATGGCGCCGTGCAGA Bphy_6596 1184814 - 1183441 - | d-galactonate transporter TERM 849 1184592 - 1184544 - G 78 -7.4 -4.371 | gap 2, opp_overlap 1184549, overlap 1184545 1184575 GCGACCAGATGAAAA TGCTGGCGGCGTAGACGCGTTTCG AAC CGAAGCG-GTCGA-GCAGCCAGCC GCCCGGCAACTGGCC TERM 850 1184962 - 1184986 + H 75 -8.5 -4.07568 | overlap 1184961 CTGGCGGATTCATTG CGCGGCGCG TGGACGC TGCGCTGCG TTTTGCCCACCCACG Bphy_6597 1185098 - 1185613 + | GCN5-related N-acetyltransferase Bphy_6598 1186480 - 1185629 - | alpha/beta hydrolase fold protein TERM 851 1186150 - 1186133 - G 71 -10.5 -3.59979 | overlap 1186115 GCGTGCCAGTTGAAA CGCGACG CATC CGCCGCG CGAATGCCCGACCAG Bphy_6599 1187883 - 1186642 - | cystathionine gamma-synthase TERM 852 1186691 - 1186673 - G 70 -7.4 -4.03413 | opp_overlap 1186673 1186669 AGCGCCTGAGAGAAA TCGGCGAT CAG ATCGTCGA TATCTTCGATGCCCG Bphy_6600 1188414 - 1187998 - | cupin 2 domain-containing protein TERM 853 1188696 - 1188677 - gR 75 -10.6 -3.66178 | overlap 1188678 GCCGGGAATGCGAAA CCCGCCGC ATGC GCGGCGGC CCCCGCGATCCTCAC TERM 854 1188695 - 1188678 - gR 80 -14.1 -2.79492 | overlap 1188677 CCGGGAATGCGAAAC CCGCCGC ATGC GCGGCGG CCCCCGCGATCCTCA Bphy_6602 1190117 - 1189131 - | indigoidine synthase A family protein Bphy_6601 1188596 - 1189192 + | hypothetical protein Bphy_6603 1190315 - 1193059 + | hypothetical protein TERM 855 1193199 - 1193234 + G 74 -12.7 -3.27022 | gap 2, opp_overlap 1193196 CGCAGTTATACACTC GACGACGTACGCGGCCC GAAC GGGCT-CGT-CGTCGTC TTCATGTGCAATCAC Bphy_6604 1193112 - 1193663 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Bphy_6605 1193879 - 1194757 + | integrase family protein Bphy_6606 1194766 - 1195974 + | putative transposase TERM 856 1197166 - 1197140 - gT 70 -12.3 -2.79878 | opp_overlap 1197129 1197140, overlap 1197139 GCTATCGACGGAAAT GCGCAGACACG TGTCG CGCATCTGCGC TGGTTTATCGTCGAC Bphy_6608 1198123 - 1197302 - | 4-oxalocrotonate decarboxylase Bphy_6607 1196432 - 1197421 + | MarR family transcriptional regulator TERM 857 1198191 - 1198208 + FH 71 -10.5 -3.52102 | GCGGGTTTTCCCTGA CGCCGCG CCTG TGCGGCG TTGTCTGGCTGAAAT TERM 858 1198249 - 1198237 - fH 87 -7.7 -4.84761 | opp_overlap 1198237 ATAGGGTGAGAAAAA CTGGT ATG ACCAG TGTTCCACCGGGTCG Bphy_6609 1198424 - 1198840 + | hypothetical protein Bphy_6610 1198904 - 1201084 + | malate synthase G TERM 859 1201147 - 1201118 - T 100 -26.5 -3.02511 | opp_overlap 1201118 CGGATGTCGTGAACA CGCCGGCCGGGTC GATC GACCCGGCCGGCG TTTTTCTTTTGGTGT TERM 860 1201118 - 1201147 + T 100 -26.5 -5.52079 | opp_overlap 1201118 CGGATGTCGTGAACA CGCCGGCCGGGTC GATC GACCCGGCCGGCG TTTTTCTTTTGGTGT Bphy_6611 1202609 - 1201170 - | major facilitator transporter TERM 861 1201805 - 1201831 + g 71 -10.7 -3.57144 | GTTGTTCGACGGCGG GCAGCGGCGCG GGCAG CGCGCGGCCGC TTTGCAACTCGGCCA Bphy_6612 1203856 - 1202705 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 862 1203448 - 1203458 + g 77 -8.2 -4.25104 | GTACGACTTCATCGA GCGC CAG GCGC TTTTCATACGGCCCA Bphy_6613 1204828 - 1203869 - | pyruvate carboxyltransferase Bphy_6614 1204966 - 1205883 + | LysR family transcriptional regulator Bphy_6615 1207395 - 1205890 - | EmrB/QacA family drug resistance transporter TERM 863 1206326 - 1206298 - G 80 -5.1 -4.77438 | overlap 1206307 ATTCACCAGCAAAAA CGCCGAATAGCCG AAG CGTCTGATCAGCG GCGCGATCCATTGCT Bphy_6616 1207430 - 1208290 + | LysR family transcriptional regulator Bphy_6617 1209006 - 1208323 - | hypothetical protein Bphy_6618 1211256 - 1210108 - | extracellular ligand-binding receptor Bphy_6619 1212580 - 1211348 - | FAD dependent oxidoreductase Bphy_6620 1214034 - 1212580 - | amino acid permease-associated region TERM 864 1213949 - 1213905 - G 95 -13.5 -4.25104 | overlap 1213936 1213938 TGCTGCCCACGAAAA GACCCGCGCCGATGATGCCGC CGA GCGAAATCATCGTCACGTGCC GCTGACGCAACGCCA TERM 865 1214091 - 1214081 - H 75 -5.4 -4.6468 | overlap 1214083 TCAAACCACACAAAA CTTG ATT CAAG AATCACACAACATTT Bphy_6621 1214281 - 1215723 + | transcriptional regulator Bphy_6622 1216815 - 1215742 - | hydroxyacylglutathione hydrolase TERM 866 1216360 - 1216335 - G 76 -6.1 -4.55491 | gap 1, overlap 1216327 CAGGCAACGAGAAAA GCTGCT-CGTGC ACC GCGCGGAACAGC GCGTGGGGATTGCCA TERM 867 1216843 - 1216901 + r 71 -11.6 -3.27109 | opp_overlap 1216849, overlap 1216888 TCGAGATGTATCGGA CAGAAACT-CCGCCGGCGCGCGCAATGG TCTTT CCCT-GCGCGCGCCGGCAGCAGTCGCGG TCTTACTTGGGTTGC TERM 868 1216895 - 1216849 - R 100 -21 -4.05033 | opp_overlap 1216843 1216888 TGTATCGGACAGAAA CT-CCGCCGGCGCGCGCAATGG TCTTT CC-CTGCGCGCGCCGGCAGCAG TCGCGGTCTTACTTG Bphy_6623 1217560 - 1216904 - | peroxidase TERM 869 1217818 - 1217834 + r 86 -6.5 -4.89838 | opp_overlap 1217806, overlap 1217806 1217820 ATTGCGGCATTCGTG CACGCTT TGG AAGCGCG TTTTCTATTTCTTGC TERM 870 1217984 - 1217942 - R 100 -16.3 -4.64766 | opp_overlap 1217942 1217967, overlap 1217943 1217945 CGCATACGGGAAAAA GGAGCGTGACGGCGG-GCGTC ATC GACGCACCGCCG-CACGCACA TCGTTCGGCTCGCGC TERM 871 1217942 - 1217984 + r 86 -16.3 -2.73364 | opp_overlap 1217942 1217943 1217945, overlap 1217967 CGCATACGGGAAAAA GGAGCGTGACGGCGG-GCGTC ATC GACGCACCGCCG-CACGCACA TCGTTCGGCTCGCGC TERM 872 1217983 - 1217943 - R 100 -19.8 -3.38378 | opp_overlap 1217942 1217967, overlap 1217942 1217945 GCATACGGGAAAAAG GAGCGTGACGGCGG-GCGTC ATC GACGCACCGCCG-CACGCAC ATCGTTCGGCTCGCG TERM 873 1217981 - 1217945 - R 100 -21 -3.25567 | opp_overlap 1217942 1217967, overlap 1217943 1217942 ATACGGGAAAAAGGA GCGTGACGGCGG-GCGTC ATC GACGCACCGCCG-CACGC ACATCGTTCGGCTCG Bphy_6624 1219047 - 1218001 - | extracellular solute-binding protein TERM 874 1218954 - 1218965 + g 71 -4.4 -4.54727 | GGCCGCCGTTCATGC CGAT GTAG ATCG TTTTGGTTTCCGACC Bphy_6625 1220195 - 1219044 - | FAD dependent oxidoreductase TERM 875 1219588 - 1219563 - G 71 -4.5 -4.56597 | opp_overlap 1219582 GGCTTCGCCGAAAAA GCCCGCGATCG TGTT CGCCCACGCGC CTGCGCTGTTGATCA TERM 876 1220120 - 1220096 - G 85 -16.4 -3.01791 | AGCGCCGCTCGAACA GCGCGACGCG CACGC CGCGCCGCGC GAGCATCAGCGCCGC Bphy_6626 1221615 - 1220188 - | BFD/(2Fe-2S)-binding domain-containing protein TERM 877 1220401 - 1220457 + g 93 -18.8 -3.61398 | gap 1, opp_overlap 1220434 CAGCGCCTTCAGACG GTTGATTTCG-CTCGCTTCACCGCTGC GAAT GCAGCGGCGAAGCGTGCCGGCATCGAC TTCTTCGCAGCGGCA Bphy_6627 1221950 - 1221612 - | hypothetical protein Bphy_6628 1222744 - 1221950 - | binding-protein-dependent transport systems inner membrane component Bphy_6629 1223673 - 1222768 - | binding-protein-dependent transport systems inner membrane component Bphy_6630 1224757 - 1223666 - | spermidine/putrescine ABC transporter ATPase subunit Bphy_6631 1225048 - 1225893 + | IclR family transcriptional regulator Bphy_6632 1226614 - 1225883 - | hypothetical protein TERM 878 1226085 - 1226069 - G 76 -9.3 -4.12532 | CGGCGTAGACAGAAA CGCAGGC ACG GCCAGCG TGAGCGCATAGTGCT Bphy_6633 1227186 - 1226737 - | OsmC family protein Bphy_6634 1227774 - 1227373 - | hypothetical protein TERM 879 1229603 - 1229570 - g 74 -14.6 -2.53876 | gap 1, opp_overlap 1229565 CGCGAGTCGAACTCA CCGCGCTCGAAGGCG ATGCA CGCCT-CGAGCGCGT GCGCTATCGTGGCGC Bphy_6635 1228180 - 1229922 + | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bphy_6636 1231684 - 1229951 - | Pyrrolo-quinoline quinone Bphy_6637 1231874 - 1232551 + | hypothetical protein Bphy_6638 1233559 - 1232543 - | LysR family transcriptional regulator TERM 880 1233240 - 1233208 - G 86 -14.1 -3.72576 | opp_overlap 1233201 1233200 CTGGGGTCGAGTAAA TGCGCAGTCGTCCAC GGG GCGGACCGCTGCGCA GTTCACGCATTTCTT Bphy_6639 1234075 - 1233668 - | cupin 2 domain-containing protein Bphy_6640 1234587 - 1234108 - | alkylhydroperoxidase Bphy_6641 1235638 - 1234757 - | ECF subfamily RNA polymerase sigma-24 factor Bphy_6642 1236980 - 1235820 - | porin TERM 881 1237143 - 1237127 - R 73 -2.9 -4.8667 | overlap 1237130 TAGAGTCGACAAAAA CATCTCG TGT CGAAGTG CGCAATAGAAAATAA Bphy_6643 1237590 - 1237210 - | response regulator receiver protein Bphy_6644 1238799 - 1237771 - | aldo/keto reductase TERM 882 1239054 - 1239018 - R 71 -10.1 -3.60006 | gap 1, opp_overlap 1239019 1239022, overlap 1239005 1239019 AACGACATTTGGAAA GCCGGCAGGGCGCGCA ATTTCA TGCGCGCCCTG-CTTC TGGTTATTGCCCGTG TERM 883 1239019 - 1239057 + r 72 -9.7 -3.63694 | gap 3, opp_overlap 1239005 1239018 1239019, overlap 1239022 ACGACATTTGGAAAG CC-G--GCAGGGCGCGCA ATTTCA TGCGCGCCCTGCTTCTGG TTATTGCCCGTGCAT TERM 884 1239022 - 1239051 + r 100 -20.8 -3.61089 | opp_overlap 1239018 1239019, overlap 1239019 ACATTTGGAAAGCCG GCAGGGCGCGCA ATTTCA TGCGCGCCCTGC TTCTGGTTATTGCCC Bphy_6645 1239989 - 1239072 - | fatty acid hydroxylase TERM 885 1240136 - 1240160 + r 77 -12.1 -3.53444 | CACGGCGCTCAACGC CTTGCCGGATG GGG CTTCCGGCAGG TTTGGCGGCGCGTGG Bphy_6646 1241285 - 1240269 - | rhodanese domain-containing protein TERM 886 1241067 - 1241032 - G 70 -2.3 -4.71061 | overlap 1241051 1241052 AGCGACAGGGAAAAA CGTACGAGCCCGTTG AGAAGG CGCCGGCCGCGCACG CGACCGACGAAGAAC TERM 887 1241618 - 1241595 - g 70 -5.2 -4.41348 | gap 1, overlap 1241597 GCGGCGTTAAAGAAA GAGTCTCGCCT GGA AGGCGTG-CCC GTGCTGCTGATGACG TERM 888 1241846 - 1241817 - g 79 -7.1 -4.56597 | gap 1, overlap 1241819 1241843 CTCGCGGTCGAAAAA GCCGCGCTGCGCGT CGA ACGCA-AGGACGGC GAAGGCACGCTTCCC Bphy_6647 1241361 - 1241867 + | response regulator receiver protein Bphy_6648 1243560 - 1241923 - | gamma-glutamyltransferase Bphy_6649 1244496 - 1243612 - | binding-protein-dependent transport systems inner membrane component TERM 889 1243730 - 1243704 - G 74 -5 -4.57569 | CGATGCCGGGAAAAA TCGACATCCACG GCG CCTGGCTGACGA AGTCTTTGGCCGTGT Bphy_6650 1245440 - 1244496 - | binding-protein-dependent transport systems inner membrane component Bphy_6651 1246942 - 1245446 - | extracellular solute-binding protein TERM 890 1246438 - 1246458 + g 71 -8.1 -4.07568 | opp_overlap 1246423 CCGGGTGCGACGCGA CACCCGCCG GGT CGGCGAGCG TTTTCGGCGCCAGCA TERM 891 1246541 - 1246587 + g 75 -8.1 -4.20696 | overlap 1246545 1246584 CAACACAATCGTCAC G-GTGCTGTCGTCGACCGCATCG ACG TGAT-CGATCGACGACAGTTCGC TTTTGCGGTTGCTGG TERM 892 1246545 - 1246582 + g 80 -14.3 -3.37939 | gap 1, overlap 1246541 ACAATCGTCACGGTG CTGTCGTCGACCGCATCG ACG TGAT-CGATCGACGACAG TTCGCTTTTGCGGTT Bphy_6652 1248082 - 1247015 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Bphy_6653 1249101 - 1248079 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Bphy_6654 1249250 - 1250131 + | LysR family transcriptional regulator TERM 893 1250413 - 1250444 + F 85 -15.1 -3.17075 | overlap 1250415 TTTCTTTCGAGCAGT TCGCTCGCCGCGG CTTCGT CTGCGGCGAGCGC TTCCATTGCGACGGG TERM 894 1251445 - 1251461 + G 71 -9.4 -3.74347 | opp_overlap 1251443, overlap 1251456 ACCGGTATAAGCACG GGCGCA CTTAT TGCGCC TTTCGCATTTCTCGG Bphy_6656 1251025 - 1252296 + | patatin Bphy_6659 1254564 - 1253104 - | xylulokinase TERM 895 1253265 - 1253296 + g 75 -12.2 -3.46824 | gap 1, opp_overlap 1253268, overlap 1253269 CGAGTGCGAGGCGAG CAAGGCGCGCCGCGC CGA GCGCGGCGC-CAATG TTGCTTCCTTCATGA TERM 896 1253816 - 1253806 - G 79 -2.4 -4.98255 | overlap 1253807 CCCCAATGACAAAAA CGCG TCG CCCG GATTTACGACGCCGA Bphy_6660 1255489 - 1254596 - | AraC family transcriptional regulator Bphy_6661 1256707 - 1255547 - | ABC transporter related Bphy_6662 1257746 - 1256712 - | alcohol dehydrogenase TERM 897 1257314 - 1257298 - G 70 -7.9 -4.005 | overlap 1257308 AAACCAATCGACAAA GGCTCGA CAA TCGCGCC TTCCGCAAACGACAC Bphy_6663 1258569 - 1257757 - | binding-protein-dependent transport systems inner membrane component Bphy_6664 1259435 - 1258557 - | binding-protein-dependent transport systems inner membrane component TERM 898 1259013 - 1258992 - G 70 -2.2 -4.59342 | gap 1, overlap 1258994 GGGATCAGAAAGAAA CG-CGGTGT CCTGT ACGCCGACG AGTCCGAGCATCCAG TERM 899 1259483 - 1259460 - R 72 -8.8 -3.79747 | overlap 1259470 CGACTGACGATGAAA CGGGAAGGCA GTGC CGCCTTCCGG AACGGCTAGAACCGG Bphy_6665 1260811 - 1259540 - | extracellular solute-binding protein TERM 900 1260922 - 1260912 - H 72 -4.6 -4.59511 | AACACCCGCGAAAAA CGCG ATC CACG CCAAAACGGATCAGC TERM 901 1261958 - 1261931 - g 77 -11.3 -3.73224 | TCATTGCCGAGGAAA TCCGCCGCG TGACGAGAAG CGCGGCGGA CGAATCCTGACCTGC Bphy_6666 1261054 - 1261968 + | LysR family transcriptional regulator Bphy_6667 1263363 - 1261975 - | major facilitator transporter TERM 902 1262094 - 1262111 + g 73 -5.5 -4.41348 | overlap 1262087 1262095 CGAAGATCGCGAGCG TCAGCGG CAGT TCGCTGG TTTCTTTCGCGACCA TERM 903 1262653 - 1262668 + g 85 -11.8 -4.13767 | GTGGCGATGCTGCGC GGCCGC CTTC GCGGCC TTTTCGGCTGCCAGC TERM 904 1263232 - 1263213 - G 71 -10.6 -3.57185 | overlap 1263211 1263214 CGGATGGAAAGAACA GGCGCCCG ACCA CGGGCGCA ACGTACAACAGCACG TERM 905 1263231 - 1263214 - G 71 -14.1 -2.73829 | overlap 1263213 1263211 GGATGGAAAGAACAG GCGCCCG ACCA CGGGCGC AACGTACAACAGCAC Bphy_6668 1265189 - 1263459 - | glucose-methanol-choline oxidoreductase TERM 906 1263521 - 1263532 + g 73 -5.8 -4.37886 | TTCGTTGCATCACCA TCGC GTCG GCGA TTTTCTCGGCGATCA TERM 907 1263939 - 1263925 - G 93 -2.8 -5.40072 | opp_overlap 1263930 GCGGCGGGAAAAAAA TCGC GGTCGTT GCGA CTTAGTCCGGAAGCC Bphy_6669 1266040 - 1265234 - | enoyl-CoA hydratase/isomerase Bphy_6670 1267638 - 1266046 - | AMP-dependent synthetase and ligase TERM 908 1266497 - 1266507 + g 86 -6.8 -4.87291 | opp_overlap 1266490 GTGAAGTACCAGCCG TCGC GCA GCGA TTTTTCGTTCGCGTC TERM 909 1267049 - 1266996 - G 77 -15.4 -2.64616 | gap 1, overlap 1266967 1267023 GCGCCATCGACAGCA GCGAGCGCACGCCCATCGTG-TG ATAGAGCGG CATCACGCCAAGCGTGCGCTCGC CGTGCCGATAGAGGT Bphy_6671 1268167 - 1267631 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Bphy_6672 1268985 - 1268164 - | carbon-monoxide dehydrogenase (acceptor) Bphy_6673 1272041 - 1268982 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 910 1269501 - 1269521 + g 100 -10.4 -5.28176 | gap 1, opp_overlap 1269476 TTGCGCGGTGAGCGC GCGGCCGCC GCCC GGCG-CCGC TTTTTTCTCCGTCGC TERM 911 1271874 - 1271816 - G 87 -14.5 -3.67792 | gap 2, opp_overlap 1271834, overlap 1271819 TCACATCGATCGAAA CAAGTTCGGCATGC-GCATGCGG-CGAGC GCA GCACGGCCGCGTGCAGCGTGCCGGGCTTG ACGCCGATGTCGTCG TERM 912 1271871 - 1271819 - G 78 -10.4 -3.9693 | gap 2, opp_overlap 1271834, overlap 1271816 CATCGATCGAAACAA GTTCGGCATGC-GCATGCGG-CGAGC GCA GCACGGCCGCGTGCAGCGTGCCGGGC TTGACGCCGATGTCG Bphy_6674 1272670 - 1272038 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 913 1272358 - 1272378 + g 70 -6.1 -4.25104 | opp_overlap 1272324 1272322 1272319 GGTTGTCCGCGAAGC CGTTGGC GATGCCG GCCAGCG TTTTCATCGAACACG Bphy_6675 1274183 - 1272663 - | UbiD family decarboxylase TERM 914 1273549 - 1273565 + g 73 -9.3 -3.86015 | overlap 1273550 ATGTCGAGCGCGTCG CCCGCGG CTT CCGCGGC TTTCTGGAACGCGTG TERM 915 1274171 - 1274151 - G 75 -8.1 -4.20354 | opp_overlap 1274161 1274162 AACGGAATTCGAAAA GGCGCTGCG GGT CGCGGCGTC GCGAGTGTTCATTTG TERM 916 1274946 - 1274933 - g 71 -9.5 -3.71848 | opp_overlap 1274942 CGCGCTGATCAACAA GCCGC GCGC GCGGC TGTCGCTCGATTCCC Bphy_6676 1274490 - 1275431 + | LysR family transcriptional regulator TERM 917 1276559 - 1276541 - g 70 -11 -3.36273 | CCTGTTCAACATCAA CGCGTCGA AGC TCAACGCG CAGCTATACACGAAA Bphy_6677 1275786 - 1276619 + | extracellular solute-binding protein TERM 918 1276875 - 1276885 + G 70 -5.4 -4.36063 | CCGCAATACGCCCGT TCTG CTG CAGA TTTTCATCGTGTTCT Bphy_6678 1276669 - 1277394 + | polar amino acid ABC transporter, inner membrane subunit Bphy_6679 1277417 - 1278064 + | polar amino acid ABC transporter, inner membrane subunit Bphy_6680 1278061 - 1278813 + | ABC transporter related Bphy_6681 1278921 - 1279694 + | IclR family transcriptional regulator TERM 919 1279709 - 1279759 + F 77 -11.8 -3.59946 | opp_overlap 1279742 GGTCAAGTATCATCT CCCTGGGCGCGGAGCGTCGTTC CGACAAT GAACGACTCTCTGCGTCCGACG TTCTCTGCTTGCAAA TERM 920 1280077 - 1280102 + G 70 -5.4 -4.42062 | gap 1, opp_overlap 1280061 GCGCAAGCTCTGCGA CGCCG-CGC GGACCAAAG GCGTCGGCG TTTATTTCGCCAATC TERM 921 1280213 - 1280182 - g 73 -14.4 -2.87354 | overlap 1280179 1280208 GCAAGGAATCAAGCA GCTCGGTCTGTTCG TCGA CGATCAGACCGCGC CCGAATTGGGCCCGC Bphy_6682 1279883 - 1280521 + | isochorismatase hydrolase TERM 922 1280632 - 1280669 + F 86 -6.1 -5.00616 | gap 1 CGGGGCGCATTCTGA CGGCGGCCCACGCAGTCT CCC AGGC-GCAAGGGTCGGCG TTTTTTGAGCGCGAA TERM 923 1281160 - 1281141 - g 84 -6.4 -4.77173 | gap 1, opp_overlap 1281156, overlap 1281142 TTGCCAGAAAATAAA GGCAC-GCA GTC TGCCGCGCC CCATGCCGCTCGCTT TERM 924 1281386 - 1281402 + G 76 -9.3 -4.1822 | opp_overlap 1281386 1281385, overlap 1281387 CTATGACCCGGAAAT GCCGCGC GAG GCGCGGG TTTATTCGACTCAAC TERM 925 1281387 - 1281401 + G 72 -12.8 -3.10611 | opp_overlap 1281386 1281385, overlap 1281386 TATGACCCGGAAATG CCGCGC GAG GCGCGG GTTTATTCGACTCAA Bphy_6683 1280787 - 1281635 + | hypothetical protein Bphy_6684 1283807 - 1281825 - | hypothetical protein TERM 926 1283055 - 1283025 - G 75 -10.5 -3.92324 | overlap 1283029 GCCTTGAACACCAAA CGTA-CCGGCTGCAC GAG GTGC-GCCGGACACG TCGTAGATCTTGATG Bphy_6685 1285293 - 1284166 - | putative serine-pyruvate aminotransferase Bphy_6686 1286461 - 1285577 - | LysR family transcriptional regulator Bphy_6687 1286597 - 1287526 + | N-acetyl-gamma-glutamyl-phosphate reductase Bphy_6688 1287993 - 1287574 - | hypothetical protein Bphy_6689 1289015 - 1288089 - | LysR family transcriptional regulator TERM 927 1289592 - 1289620 + G 90 -15.9 -3.46068 | overlap 1289590 CAGTTGGGCCCTCGC CGCGTGGCTGCGC GGC GCGCTGCCAGGCG TATTTGCGTTGCCGG Bphy_6690 1289104 - 1289940 + | hypothetical protein Bphy_6691 1289985 - 1290488 + | hypothetical protein Bphy_6692 1291891 - 1290494 - | cysteinyl-tRNA synthetase TERM 928 1290843 - 1290860 + g 100 -7.7 -5.40072 | gap 1, opp_overlap 1290830 1290842 1290843 AACCGCGCGACAAAT CGCGCATC GGC GA-GCGCG TTTTTTTGGCGCCAG TERM 929 1291860 - 1291844 - G 75 -9.3 -4.0641 | TTCGATCGATACAAA CGGGCGC AGC GCGCGCG ACCAGGTGTCATACA TERM 930 1291957 - 1291932 - R 100 -12.5 -5.44198 | opp_overlap 1291932 AACAAACAACAAAAA GGCCGCCGGTC TTTC AACGGGCGGCC AGAAGGCAATTGATT Bphy_6693 1294328 - 1292148 - | TonB-dependent siderophore receptor TERM 931 1293026 - 1293045 + g 76 -13.6 -3.16881 | GCCTGTAGAGATTCT CGCCGATG TGCA CATCGGCG TTCGTCAGATACGTG TERM 932 1294574 - 1294560 - R 75 -10 -3.66178 | TTCCCCAATGTCAAA CGCGAA TCA TTCGCG TTAACGACCAAGGTG Bphy_6694 1295015 - 1294575 - | hypothetical protein Bphy_6695 1295221 - 1295748 + | NUDIX hydrolase Bphy_6696 1297333 - 1295783 - | MlrC domain-containing protein Bphy_6697 1298728 - 1297400 - | major facilitator transporter TERM 933 1298570 - 1298533 - G 82 -3.9 -4.99645 | overlap 1298567 AGCCGAGAAAGAAAA TGCCCGCGCCGACGCCG TACG CCGCATCGGAGAAGCCA AGGTCGCTTTGCATC Bphy_6698 1298871 - 1299803 + | LysR family transcriptional regulator Bphy_6699 1299955 - 1301682 + | methyl-accepting chemotaxis sensory transducer Bphy_6700 1302945 - 1301755 - | glycosyl transferase group 1 TERM 934 1302345 - 1302326 - G 91 -16.4 -3.57918 | opp_overlap 1302327 ACGCACAGCACATAA CGGCGCGG CAGG CCGCGCCG ATCGCGCACTTCATC TERM 935 1302686 - 1302635 - G 93 -18.8 -3.46659 | gap 1, overlap 1302624 1302637 1302668 CAGAGCCACAACGAA TACGGCGTGTCGTAGCCCAACGTGA CAA CCACATCGGGCT-CGACTCGCCGGA CGATCGCAGCGAGTC TERM 936 1302684 - 1302637 - G 100 -21.4 -3.30039 | gap 1, overlap 1302624 1302635 1302668 GAGCCACAACGAATA CGGCGTGTCGTAGCCCAACGTGA CAA CCACATCGGGCT-CGACTCGCCG GACGATCGCAGCGAG TERM 937 1305304 - 1305286 - g 71 -4.4 -4.53705 | overlap 1305287 AATCCGCAGACAAAA GCCGCCGC ATG ACGGTGAC GCAGTTCGGTTTCGA TERM 938 1305471 - 1305501 + G 78 -3.3 -4.8667 | gap 2, opp_overlap 1305475, overlap 1305475 1305475 GTCGATGTCTGGAAA TGGAGTGTCGCTCGT CCT GCGAGCGA-GC-CCG TTTTTATGAAGTATC Bphy_6701 1303329 - 1305755 + | FG-GAP repeat-containing protein TERM 939 1306662 - 1306672 + G 70 -4.6 -4.40804 | overlap 1306655 AGCATGAGCCCGATG CGCG TCT CGTG TTTTATGGCGTGATC TERM 940 1307093 - 1307083 - g 80 -8.2 -4.41348 | overlap 1307067 1307084 1307085 CGTCTTCGAAAGAAA CGGC ATT GCCG CCAACGCGTCGATAG Bphy_6702 1306013 - 1307140 + | glycosyl transferase group 1 TERM 941 1307133 - 1307168 + F 72 -5.6 -4.52589 | overlap 1307137 AGCGCAATGAATCTT CGATGTGA-GGACGGA ACAACA TCTGTCCGTCAC-TCG TTTTCTATCACGCAC TERM 942 1308288 - 1308271 - g 79 -6.9 -4.56775 | ACGCCCGCCGAAAAA GTGCGCG CTGC CGCTCAC TGGCTGCAGGACAAC Bphy_6703 1307599 - 1308588 + | AraC family transcriptional regulator TERM 943 1309158 - 1309124 - g 77 -15.8 -2.62616 | opp_overlap 1309119 1309118 CGAGTCGTTACAGCA TCAGCATCATCGCTGG GCA CAAGCGACGACGCTGA TCCAGATTTCCATCG TERM 944 1309235 - 1309254 + G 72 -7 -4.25283 | GCTCACGATCGGGAT GGCCGTCG TTGC CGTCGGTC TTTTCGTCACGGCGT Bphy_6704 1308705 - 1309283 + | hypothetical protein Bphy_6705 1311275 - 1309305 - | Fis family proprionate catabolism activator TERM 945 1311506 - 1311462 - g 77 -11.9 -3.61062 | overlap 1311463 1311504 1311505 AACTCAACCAGACAA CCCATCAGCGCCGGCGCGGCA TTC CGCCAGGCCGTCGCAGAAGGA CAACCGCTGCAGGTC Bphy_6706 1311444 - 1312337 + | methylisocitrate lyase TERM 946 1312437 - 1312412 - g 87 -6 -5.09426 | overlap 1312413 TTCAAGCCGAAAAAA TCCGTCGCGC TGTCGG GCGTGACGGC GGGCAACACGGCCCT Bphy_6707 1312358 - 1313527 + | 2-methylcitrate synthase/citrate synthase II TERM 947 1313575 - 1313610 + F 83 -13.3 -3.33744 | gap 1, overlap 1313575 1313576 AGCCGCGTCGAACTT GGGCCCTGGTTCGTCG ATACC CG-CGAGCCAGGGCCG CTTTTTGCCGACCGA TERM 948 1313575 - 1313611 + F 100 -13.1 -4.56597 | overlap 1313575 1313576 AGCCGCGTCGAACTT G-GGCCCTGGTTCGTCG ATACC CG-CGAGCCAGGGCCGC TTTTTGCCGACCGAC TERM 949 1313576 - 1313609 + F 85 -16.8 -2.60032 | gap 1, overlap 1313575 1313575 GCCGCGTCGAACTTG GGCCCTGGTTCGTCG ATACC CG-CGAGCCAGGGCC GCTTTTTGCCGACCG TERM 950 1315103 - 1315121 + G 71 -10.3 -3.58343 | opp_overlap 1315095 AAGCGAACCTGCTGC CCGAGCT GGAGA AGCTCGG TTTCGGCATCGTCGC TERM 951 1315835 - 1315817 - g 72 -8.8 -3.95584 | CGCTGATCAATGAAA TGGCCGTC GTC GACGGGCA GTTGAAGAAGGGATC Bphy_6708 1313716 - 1316328 + | 2-methylisocitrate dehydratase, Fe/S-dependent TERM 952 1316354 - 1316381 + F 72 -9.8 -3.65542 | gap 1, overlap 1316356 1316356 ATTCATGCATTTCAT GC-GGGCGGTGCG CGA TGTGCCGCCCTGC TCTTTTCAGGATCAC Bphy_6709 1316413 - 1317588 + | AcnD-accessory protein PrpF TERM 953 1317679 - 1317645 - T 75 -9.3 -3.89822 | gap 1, opp_overlap 1317646, overlap 1317646 1317648 CAGCTACGCGATAAA CGACGGGCGCGTA-CA ACAT CGCTACGCACCCGTCT TTCAGGCAACACGCG TERM 954 1317646 - 1317678 + T 71 -10.6 -3.53012 | opp_overlap 1317645 1317646 1317648 AGCTACGCGATAAAC GACGGGCGCGTA CAACATCGC TACGCACCCGTC TTTCAGGCAACACGC TERM 955 1317678 - 1317646 - T 74 -12.8 -2.93572 | gap 1, opp_overlap 1317646, overlap 1317645 1317648 AGCTACGCGATAAAC GACGGGCGCGTA-CA ACAT CGCTACGCACCCGTC TTTCAGGCAACACGC TERM 956 1318293 - 1318261 - T 100 -16.3 -3.65425 | overlap 1318263 TTCATATACGGGAAA CATGCGCGCCGACCT TCG AGGCCGACGCGCATC GCACTACACGGTCAC TERM 957 1318291 - 1318263 - T 100 -18.9 -3.40558 | overlap 1318261 CATATACGGGAAACA TGCGCGCCGACCT TCG AGGCCGACGCGCA TCGCACTACACGGTC Bphy_6711 1319234 - 1318305 - | dihydrodipicolinate synthetase TERM 958 1318991 - 1319041 + g 77 -10.9 -3.72453 | overlap 1319003 AATGGCTCGTGGTCA CGATCACGGGCACGCGGCCCGCG ACGTG CTCGAGCATCGTGCGCGTGAGCG TTTCGCGTTCTTCGT Bphy_6712 1320627 - 1319278 - | major facilitator transporter TERM 959 1319827 - 1319844 + g 72 -8.3 -4.05446 | opp_overlap 1319823 1319821 1319826 CGGCAGGAACAGCAG CGCGAGC AGCA GCACGCG TTTGTCCTTCAGCGC Bphy_6713 1322291 - 1320702 - | aldehyde dehydrogenase Bphy_6714 1324041 - 1322308 - | dihydroxy-acid dehydratase TERM 960 1324334 - 1324281 - g 72 -8.2 -4.08216 | gap 2 GCACGCGGCTCAAAA CGCGGCAATTGCTG-CTGCT-CGTCG CGCT CGACGAAGAAGGCAACATCCACCGCG CCGCCGACGCTCTCA Bphy_6715 1324238 - 1325188 + | LysR family transcriptional regulator Bphy_6716 1325959 - 1325207 - | short-chain dehydrogenase/reductase SDR Bphy_6717 1326819 - 1325974 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Bphy_6718 1326984 - 1327412 + | hypothetical protein Bphy_6719 1328336 - 1327425 - | hypothetical protein Bphy_6720 1329213 - 1330769 + | hypothetical protein TERM 961 1330840 - 1330804 - f 77 -7.8 -4.4078 | opp_overlap 1330804 1330805, overlap 1330805 1330806 GCCGTCGAAGCAAAA TCGCGGGCGTCACCCG GGCAA CGGCTGACGTCCGCCT GCTTTTGGCGAATTC TERM 962 1330839 - 1330805 - f 71 -11.3 -3.24146 | opp_overlap 1330804 1330805, overlap 1330804 1330806 CCGTCGAAGCAAAAT CGCGGGCGTCACCCG GGCAA CGGCTGACGTCCGCC TGCTTTTGGCGAATT TERM 963 1330805 - 1330839 + F 79 -13.5 -3.08776 | opp_overlap 1330805 1330804 1330806, overlap 1330804 CCGTCGAAGCAAAAT CGCGGGCGTCACCCG GGCAA CGGCTGACGTCCGCC TGCTTTTGGCGAATT TERM 964 1330838 - 1330806 - f 78 -14.8 -2.54166 | opp_overlap 1330805 1330804, overlap 1330805 1330804 CGTCGAAGCAAAATC GCGGGCGTCACCCG GGCAA CGGCTGACGTCCGC CTGCTTTTGGCGAAT Bphy_6721 1330979 - 1331653 + | putative transmembrane protein Bphy_6722 1331895 - 1332188 + | hypothetical protein TERM 965 1333373 - 1333388 + F 75 -11.8 -3.29471 | overlap 1333350 GAACTACACTTTCGG CCCGGC TGTT GCCGGG TTCGTGTACTCGCAC TERM 966 1334588 - 1334578 - g 76 -2.4 -4.87291 | opp_overlap 1334578 TATTCCAACGAAAAA CCGG CTG CCGC TTCTGCAAAGAGCGG Bphy_6724 1334522 - 1335472 + | glycosyl transferase family protein Bphy_6725 1336556 - 1335495 - | dTDP-glucose 4,6-dehydratase Bphy_6726 1337555 - 1336602 - | glucose-1-phosphate thymidylyltransferase Bphy_6727 1338579 - 1337620 - | glycosyl transferase family protein Bphy_6728 1339744 - 1338605 - | NAD-dependent epimerase/dehydratase TERM 967 1339661 - 1339673 + g 71 -7.7 -4.18018 | CAGATTGTCGAGCAC CGTGA CCG TCACG TTTTGACTCACCAGC Bphy_6729 1341062 - 1339815 - | polysaccharide biosynthesis protein Bphy_6730 1342753 - 1341089 - | hypothetical protein TERM 968 1341764 - 1341776 + g 71 -9.1 -3.7732 | CGCATCCTGGTAGTC GAGCG CGC CGCTC TTCTTCATCTCCACA Bphy_6731 1343967 - 1342774 - | hypothetical protein Bphy_6732 1345188 - 1344004 - | glycosyl transferase group 1 TERM 969 1344922 - 1344932 + g 72 -8.2 -4.19746 | opp_overlap 1344905, overlap 1344908 TGTTCGCGTCTTGAA CGGC GCG GCCG TTGTTTTGGCATCGG Bphy_6733 1347644 - 1345242 - | exopolysaccharide tyrosine-protein kinase TERM 970 1345797 - 1345839 + g 84 -14 -3.61398 | opp_overlap 1345797 1345799, overlap 1345799 GTTCGCTGAAACAAA GCTCTTGCCGGTGCCGGGCG TCG CGCCCGTCACGAGCAGGATC TTGTTCGGCGCCACG TERM 971 1345839 - 1345797 - G 100 -14 -4.41348 | opp_overlap 1345797 1345799, overlap 1345799 GTTCGCTGAAACAAA GCTCTTGCCGGTGCCGGGCG TCG CGCCCGTCACGAGCAGGATC TTGTTCGGCGCCACG TERM 972 1345799 - 1345837 + g 84 -15.2 -3.38812 | opp_overlap 1345797 1345799, overlap 1345797 TCGCTGAAACAAAGC TCTTGCCGGTGCCGGGCG TCG CGCCCGTCACGAGCAGGA TCTTGTTCGGCGCCA TERM 973 1345837 - 1345799 - G 74 -15.2 -2.54371 | opp_overlap 1345799 1345797, overlap 1345797 TCGCTGAAACAAAGC TCTTGCCGGTGCCGGGCG TCG CGCCCGTCACGAGCAGGA TCTTGTTCGGCGCCA TERM 974 1346879 - 1346893 + g 77 -11.4 -3.73402 | overlap 1346875 TGACGTGCATCGCGA GCAGCG GAT CGCTGC TTTCGTAGAGGATCT Bphy_6734 1348754 - 1347720 - | GDP-mannose 4,6-dehydratase Bphy_6735 1351101 - 1348873 - | mannose-1-phosphate guanylyltransferase (GDP) TERM 975 1349147 - 1349129 - G 89 -2.3 -5.40072 | opp_overlap 1349129, overlap 1349130 CTCTGCCGAAAAAAA TGCACCC CTGTC GGATGCG GTTTGCCGATGGGTG TERM 976 1349438 - 1349417 - G 82 -5.8 -4.72272 | opp_overlap 1349416 GGGGTTGACGAAAAA GCTTCGAC GATCAG GTCGACGC GCTTGTATGGAACCA Bphy_6736 1351503 - 1352123 + | phosphoesterase PA-phosphatase related Bphy_6737 1352865 - 1352110 - | AraC family transcriptional regulator Bphy_6738 1354111 - 1353110 - | AraC family transcriptional regulator TERM 977 1354432 - 1354471 + H 100 -13.8 -4.53439 | gap 1 TGTGCATCATTATTT GTGTCGCGAACTTCCGATA GCT TGTCGGAAGTTC-CTACAC TTTGTTTGAGTTTCG Bphy_6739 1354859 - 1355854 + | aldo/keto reductase Bphy_6740 1355970 - 1356257 + | hypothetical protein Bphy_6741 1356494 - 1358680 + | integral membrane sensor hybrid histidine kinase TERM 978 1358743 - 1358715 - T 81 -13.1 -3.53012 | opp_overlap 1358724, overlap 1358717 GCGTCGGCGTTGAAA GACGCAGCGGC TGCGATC GCCGCTGCGGC ATCGCCCCTTTTGCG TERM 979 1358741 - 1358717 - T 87 -14.3 -3.34398 | opp_overlap 1358724, overlap 1358715 GTCGGCGTTGAAAGA CGCAGCGGC TGCGATC GCCGCTGCG GCATCGCCCCTTTTG Bphy_6744 1359860 - 1359216 - | thioredoxin-like fold Bphy_6745 1360740 - 1360009 - | GntR domain-containing protein TERM 980 1360904 - 1360892 - H 82 -6.3 -4.84359 | TCATTTGCACAAAAA GAACA CGT TGTTC ACTTGAAGGACAACA Bphy_6746 1360997 - 1362103 + | mandelate racemase/muconate lactonizing protein TERM 981 1362319 - 1362343 + G 78 -4.2 -4.74132 | gap 1, opp_overlap 1362309, overlap 1362320 1362321 AAGGACAGTCTGCTC ATCAGCCG-GC TGGT GCTCGGCTGGA TTTTTCCTGCGCTGT Bphy_6747 1362214 - 1363155 + | auxin efflux carrier Bphy_6748 1363954 - 1363262 - | ThiJ/PfpI domain-containing protein TERM 982 1364737 - 1364719 - g 71 -7.3 -4.14764 | overlap 1364714 1364720 GCGCAAAGAACCAAA CCGGGCC CGTTC GGCCCGC GCACGCACGAAATGG Bphy_6749 1364335 - 1365063 + | GCN5-related N-acetyltransferase Bphy_6750 1366302 - 1365190 - | diguanylate cyclase TERM 983 1365469 - 1365453 - G 72 -6.5 -4.25104 | GCTCCGGCAGCAAAA CCGCGAA TTC TTCGCCG CCGATGCGTGCCAGA Bphy_6751 1366559 - 1369225 + | DEAD/DEAH box helicase domain-containing protein Bphy_6752 1369225 - 1369893 + | metallophosphoesterase Bphy_6753 1369978 - 1370448 + | dehydratase TERM 984 1370591 - 1370574 - g 88 -9.1 -4.63928 | ACAGCACGCGAAAAA CGCTCAC ACAG GCGAGCG CCGATTACTGGCGTC TERM 985 1370833 - 1370821 - g 76 -5.5 -4.48987 | opp_overlap 1370821, overlap 1370815 GGTCGACAAGGAAAA GCACA AGC TGCGC TTTTACACGCGCCAG Bphy_6754 1370462 - 1372156 + | poly(R)-hydroxyalkanoic acid synthase, class I Bphy_6755 1373819 - 1372197 - | ATPase central domain-containing protein TERM 986 1372460 - 1372485 + g 74 -13.3 -3.23216 | opp_overlap 1372460 TGCAGCGCGACAGAA TCGCATCGTCG ACAT CGTCGATGCGA TTGGTCGTCATGAAC TERM 987 1372485 - 1372460 - G 78 -13.3 -3.49475 | opp_overlap 1372460 TGCAGCGCGACAGAA TCGCATCGTCG ACAT CGTCGATGCGA TTGGTCGTCATGAAC TERM 988 1373919 - 1373895 - R 75 -12.2 -3.30203 | gap 1, opp_overlap 1373893 1373897 1373917 1373918 CGAGGAAGAACCGAA CAGCCATGCCG ACGA CGGCA-GGCTG GATTGCATGCAGTCC Bphy_6756 1374552 - 1373875 - | phospholipase/carboxylesterase TERM 989 1374331 - 1374354 + g 71 -4.5 -4.56597 | TTTGTCGCGATCCGC GTGCTCCTC GATAAA GGGCAGCAC TTTTTCCGGAAAGCC TERM 990 1374653 - 1374665 + r 71 -10.5 -3.54638 | CTATGGAGGCCGATC GCGCC TCG GGCGC TTTGGGCACAGTTCT TERM 991 1374905 - 1374849 - R 100 -23.5 -3.1883 | gap 3, opp_overlap 1374852 1374852 1374866, overlap 1374851 AAAAATGTGTACCAA GACCGTCGACTACTCAAGCGAGCGCATC CCTT GATGCGCTCGCTTGAGTAGTC--CG-TC ATCCTCTTTGGCACC TERM 992 1374907 - 1374851 - R 100 -24 -3.14795 | gap 1, opp_overlap 1374852 1374852 1374866, overlap 1374849 AAATGTGTACCAAGA CCGTC-GACTACTCAAGCGAGCGCATC CCTT GATGCGCTCGCTTGAGTAGTCCGTCAT CCTCTTTGGCACCAT TERM 993 1374852 - 1374906 + r 100 -25.3 -2.84325 | gap 1, opp_overlap 1374849 1374851, overlap 1374852 1374866 AATGTGTACCAAGAC CGTC-GACTACTCAAGCGAGCGCATC CCTT GATGCGCTCGCTTGAGTAGTCCGTCA TCCTCTTTGGCACCA TERM 994 1374852 - 1374909 + r 76 -11.7 -3.35522 | gap 4, opp_overlap 1374849 1374851, overlap 1374852 1374866 AATGTGTACCAAGAC CG-T--C-GACTACTCAAGCGAGCGCATC CCTT GATGCGCTCGCTTGAGTAGTCCGTCATCC TCTTTGGCACCATTG TERM 995 1374866 - 1374891 + r 100 -19.1 -3.10164 | opp_overlap 1374849 1374851, overlap 1374852 1374852 CCGTCGACTACTCAA GCGAGCGCATC CCTT GATGCGCTCGC TTGAGTAGTCCGTCA Bphy_6757 1375493 - 1374933 - | hypothetical protein Bphy_6758 1376077 - 1375589 - | hypothetical protein Bphy_6759 1376793 - 1377464 + | hypothetical protein TERM 996 1377526 - 1377508 - f 80 -4.4 -4.90266 | overlap 1377509 TTCATCAAGTAAAAA GGTCGTCG ACT CGACGGCG CAGGTTCTCCCCCCG Bphy_6760 1377578 - 1378378 + | hypothetical protein TERM 997 1378444 - 1378393 - f 100 -15.3 -4.01381 | gap 1, opp_overlap 1378389 1378399, overlap 1378395 1378396 AGCTAATCGAAATAA CACTCAGATCATCCGG-GCTGCCT ACACG AGGCGGCGCCGGACGATCTGAATT CAGCTTCTCGGACGA TERM 998 1378442 - 1378395 - f 95 -17.9 -3.59372 | gap 1, opp_overlap 1378389 1378399, overlap 1378393 1378396 CTAATCGAAATAACA CTCAGATCATCCGG-GCTGCCT ACACG AGGCGGCGCCGGACGATCTGAA TTCAGCTTCTCGGAC TERM 999 1378441 - 1378396 - f 100 -19.2 -2.749 | gap 1, opp_overlap 1378389 1378399, overlap 1378395 1378393 TAATCGAAATAACAC TCAGATCATCCGG-GCTGCCT ACACG AGGCGGCGCCGGACGATCTGA ATTCAGCTTCTCGGA TERM 1000 1378399 - 1378438 + F 81 -15.1 -2.55551 | gap 1, opp_overlap 1378396 1378395 1378393, overlap 1378389 TCGAAATAACACTCA GATCATCCGG-GCTGCCT ACACG AGGCGGCGCCGGACGATC TGAATTCAGCTTCTC Bphy_6761 1378459 - 1378656 + | hypothetical protein Bphy_6762 1379350 - 1378787 - | hypothetical protein Bphy_6763 1379775 - 1380284 + | hypothetical protein Bphy_6764 1381809 - 1380388 - | hypothetical protein TERM 1001 1380629 - 1380641 + g 89 -10.5 -4.57569 | opp_overlap 1380628 1380627 1380629 TGCGCCCAGAAAAGT CCGCG TGT CGCGG TTTTTAAGGCGGTGG TERM 1002 1381101 - 1381140 + g 100 -21.5 -3.72324 | gap 1, overlap 1381110 1381112 GGCGTTCGGCACGTG CGTCGGCGCG-CGCGGCA GCGAG TGCAGCGTCGCGCCGACG TTCTTCCTGGCGCTC Bphy_6765 1382224 - 1381883 - | hypothetical protein Bphy_6766 1382410 - 1382628 + | AbrB family transcriptional regulator TERM 1003 1383397 - 1383351 - g 84 -14.2 -3.61536 | opp_overlap 1383349 1383348, overlap 1383343 1383338 1383352 AAGCCAACGCGGAAA TGCTGTCGGCGTTGCCGGTCGC TGA GCGTCCGACAACGCCCTCTGCG GCATTTACGTGGATT TERM 1004 1383396 - 1383352 - g 84 -17.7 -2.7644 | opp_overlap 1383349 1383348, overlap 1383343 1383338 1383351 AGCCAACGCGGAAAT GCTGTCGGCGTTGCCGGTCGC TGA GCGTCCGACAACGCCCTCTGC GGCATTTACGTGGAT Bphy_6767 1383026 - 1383616 + | hypothetical protein Bphy_6768 1385555 - 1384059 - | patatin Bphy_6769 1386908 - 1386258 - | hypothetical protein TERM 1005 1386656 - 1386628 - G 79 -2.2 -5.08255 | ACGTCGAAAACAAAA CCGCCCTCGTAG TCCTC CTTCGCGGCCAG AAAGACGGCATACAG TERM 1006 1387615 - 1387658 + H 87 -15.6 -3.33492 | gap 1 ATAGCTTCGGTTAAG GGCTTTTGGCAATGACTGTCA CCG TG-CGGTCATTGTCAAAAGTC TTATCCGATGCGTCG Bphy_6770 1387666 - 1388529 + | hypothetical protein TERM 1007 1388563 - 1388585 + F 90 -17.8 -2.93723 | overlap 1388559 TTTTTCCGGGAAGGT GTAGGACCGC TTC GCGGTCCTAC TGTCATTGATAGCAA TERM 1008 1389075 - 1389061 - g 71 -4.2 -4.52345 | ATACCAGCAAAGAAA TGGCGA CGG TCGACA GCGTTCATTCCCAAA TERM 1009 1389559 - 1389533 - g 70 -5.8 -4.22346 | overlap 1389522 GAAATGCATCGAAAA CGCTCGTGCA CGAAAGC CGTACGAGCG AATCGGAACCTCAGT Bphy_6771 1389039 - 1389632 + | hypothetical protein Bphy_6772 1390457 - 1389693 - | histone family protein nucleoid-structuring protein H-NS TERM 1010 1389735 - 1389757 + g 75 -4.1 -4.63218 | gap 1, overlap 1389733 AACGTTACTCGGCGC CGGT-GCTTC CGGA GCAGCGACCG TTTTCTTCGCGGCAG Bphy_6773 1390636 - 1390974 + | histone family protein nucleoid-structuring protein H-NS Bphy_6774 1392269 - 1391439 - | xylose isomerase domain-containing protein Bphy_6775 1393513 - 1392266 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1011 1393541 - 1393555 + r 73 -3.5 -4.79949 | overlap 1393538 1393537 ATATCGTTTCAGGTC GCGTT CAGGC GACGC TTCTTTTTTTCGAAG Bphy_6776 1394538 - 1393534 - | fatty acid hydroxylase TERM 1012 1394192 - 1394172 - G 70 -11.2 -3.32946 | opp_overlap 1394188 1394191, overlap 1394144 1394170 TCTTGAACCAGAACA CGTCGGAA GGCTG TTCCGACG GAAACTTGCCGTTGT Bphy_6777 1394870 - 1394559 - | Rieske (2Fe-2S) domain-containing protein Bphy_6778 1395953 - 1394910 - | ABC sugar transporter, periplasmic ligand binding protein Bphy_6779 1396116 - 1397147 + | LacI family transcription regulator Bphy_6780 1398036 - 1397446 - | TetR family transcriptional regulator Bphy_6781 1398178 - 1398891 + | glutathione S-transferase domain-containing protein Bphy_6782 1399643 - 1400338 + | hypothetical protein Bphy_6783 1401051 - 1400545 - | hypothetical protein TERM 1013 1401496 - 1401531 + r 78 -9 -4.20106 | overlap 1401500 1401504 CCCGGCCCCCTTCGC CTTCTCGAGCTCCTCA GTAA TGAGGGGCTTGATACG TTTTCGCTCAGATTT TERM 1014 1401500 - 1401527 + r 73 -12.8 -2.76404 | overlap 1401496 1401504 GCCCCCTTCGCCTTC TCGAGCTCCTCA GTAA TGAGGGGCTTGA TACGTTTTCGCTCAG Bphy_6784 1401816 - 1401478 - | XRE family transcriptional regulator TERM 1015 1401793 - 1401805 + g 75 -3.3 -4.78107 | GCGGCGCCCGAAGAC GGTAC CTG GTTCC TTTTTGATCATCCTA TERM 1016 1402187 - 1402154 - g 77 -11.7 -3.72968 | gap 1, overlap 1402166 ACTACGACACCCAAA CG-CAGGCAGACAGCG TGG CGCTGTCAGGCTGTCG CGCAGCGGCGCGACG Bphy_6785 1401997 - 1402533 + | hypothetical protein TERM 1017 1402695 - 1402667 - f 87 -15.3 -3.34715 | overlap 1402665 CAGGCTGTTGAAATA CCTCCCGCGCA CGTCATC CGCGCGGGAGG GGTAAACGTTGAAAT Bphy_6786 1402741 - 1403847 + | transposase IS4 family protein Bphy_6787 1404054 - 1405346 + | transposase IS4 family protein TERM 1018 1405433 - 1405472 + T 75 -11.8 -3.24232 | gap 1, opp_overlap 1405432 1405431, overlap 1405432 1405429 CCGTTACCTCAAATG TTTTGTGACACAGT-AG TATTAGT CTCACTGTGTCACAAAA TCTGTTTGCAACAAA TERM 1019 1408101 - 1408112 + T 75 -5.8 -4.62302 | CGGCCGCTGGTCACT TCGC GAAC GCGA TTTTTCCGGATCTTC Bphy_6790 1409161 - 1408256 - | LysR family transcriptional regulator TERM 1020 1408465 - 1408484 + g 77 -12.2 -3.63515 | AGCCAGCTAGGGCCG CGTCTACC ATTT GGTAGACG TTGTTGAAGGTAAGC Bphy_6791 1409267 - 1409677 + | cupin 2 domain-containing protein Bphy_6792 1409682 - 1410158 + | cupin 2 domain-containing protein TERM 1021 1410871 - 1410853 - g 75 -10.3 -3.83844 | CTCACGAAGGAAGAA GCGTCAG AAACG CTGACGC AACTCGCGTTTTATG Bphy_6793 1410166 - 1410963 + | carboxymuconolactone decarboxylase TERM 1022 1411789 - 1411819 + F 91 -16.9 -3.53811 | gap 1, overlap 1411786 1411788 TATTGAGCGATGGCC GACCGGGT-GGGCG TTCT CGCCCTGCCCGGTC TTTCCAACCACTGGA Bphy_6795 1411845 - 1412072 + | 4-oxalocrotonate tautomerase TERM 1023 1412992 - 1413022 + G 90 -15.4 -3.77087 | GGCTGAGGCCTCGTT GCTCGCGACTGCGG GGG CCGCACTTGCGGGC TTTGGCTATTCACTG Bphy_6796 1412078 - 1413274 + | major facilitator transporter TERM 1024 1413457 - 1413438 - f 72 -8.6 -3.81447 | gap 1, opp_overlap 1413449, overlap 1413427 TAGATCGGAGAAGAA TGCCGCGTC CCC GACGCG-CA CACGCACCTCGCTTC TERM 1025 1413651 - 1413628 - f 75 -8.8 -4.0825 | overlap 1413634 CTGGTAAGCAAAGAA GCAAAACGCG CGCA CGCGTATCGC CCCAAAGATTGAGAA TERM 1026 1413645 - 1413634 - f 79 -7.2 -4.63107 | overlap 1413628 AGCAAAGAAGCAAAA CGCG CGCA CGCG TATCGCCCCAAAGAT TERM 1027 1414238 - 1414253 + F 83 -8.2 -4.56597 | opp_overlap 1414237 1414236, overlap 1414239 TCCTGCCCACAAACC TGCGCC GGTA GGCGCG TTTTTGACGGGGCGA Bphy_6797 1414412 - 1415416 + | hypothetical protein Bphy_6798 1415508 - 1416125 + | hypothetical protein Bphy_6799 1417800 - 1416436 - | gluconate 2-dehydrogenase (acceptor) Bphy_6800 1420091 - 1417833 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 1028 1418486 - 1418442 - G 73 -9.4 -3.88232 | gap 2 CCTCTCATAGAAGAA GTCGTTCATCGAGCTACCGACG GAG CGCCAATAGC-CGA-GTACGAC CGGGGTCTTCACATA TERM 1029 1420041 - 1420015 - G 78 -4.5 -4.78237 | GATGCGAGAAGAAAA CGACGCCG-CGAA ATG TTCGTCGG-ATCG CCCGTCGGAAATACC Bphy_6801 1420644 - 1420075 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 1030 1420583 - 1420565 - G 73 -12.4 -3.34088 | ACCATGACAGAGCAA GCCCCGCA TTG TGCGAGGC CACATCCATATTTCG Bphy_6802 1421570 - 1421394 - | hypothetical protein Bphy_6803 1422909 - 1421599 - | uncharacterized membrane-anchored protein Bphy_6804 1424124 - 1423156 - | periplasmic binding protein/LacI transcriptional regulator Bphy_6805 1425787 - 1424288 - | methyl-accepting chemotaxis sensory transducer TERM 1031 1425461 - 1425485 + g 95 -12.9 -4.27117 | opp_overlap 1425465, overlap 1425443 1425462 GACCTTTGCCTGCGA AGCAGCGAATG CCG CATTCGCTGCC TTTATCTTCTCCAAC TERM 1032 1425462 - 1425484 + g 85 -16.4 -3.15788 | opp_overlap 1425465, overlap 1425443 1425461 ACCTTTGCCTGCGAA GCAGCGAATG CCG CATTCGCTGC CTTTATCTTCTCCAA TERM 1033 1426020 - 1425994 - R 75 -3.7 -4.7497 | gap 1, overlap 1425996 GCGATGCATGAAAAA GAGTGCGATACC TTTC GACACCGCAC-C TGAAACGCCCCTCTC Bphy_6806 1427225 - 1426074 - | OmpC family outer membrane porin TERM 1034 1426362 - 1426322 - G 74 -10.4 -3.76884 | gap 1, overlap 1426324 ATACAGCACCAATAA GAGCGGCGGC-TGACGTGG CTTG CCACGTCACACCACCCCAC TCCTGATCAAGGGTC TERM 1035 1426360 - 1426324 - G 72 -11.6 -3.46144 | gap 1, overlap 1426322 ACAGCACCAATAAGA GCGGCGGC-TGACGTGG CTTG CCACGTCACACCACCCC ACTCCTGATCAAGGG TERM 1036 1427427 - 1427438 + H 70 -3.6 -4.68384 | TTCTATAGATGCACG CGGG GGGA TCCG TTTTATTGCGTAGGT Bphy_6808 1428446 - 1428826 + | transposase IS4 family protein Bphy_6809 1429765 - 1429001 - | short-chain dehydrogenase/reductase SDR Bphy_6810 1431248 - 1429866 - | MmgE/PrpD family protein Bphy_6811 1431428 - 1432357 + | LysR family transcriptional regulator TERM 1037 1433303 - 1433317 + G 75 -2.8 -4.77438 | TCATCAACTGCTTTG GGAG CGACCGC CTCC TTTTTGGTGGTGACT Bphy_6812 1432594 - 1433469 + | amidohydrolase 2 TERM 1038 1433534 - 1433517 - T 76 -12.7 -3.09327 | CCACTTGATGCAACA GCGCCGT ACTC ACGGCGC CTCCTACTCATAGCT Bphy_6813 1434784 - 1433564 - | porin Bphy_6814 1436271 - 1434946 - | major facilitator transporter TERM 1039 1436246 - 1436258 + g 70 -7.7 -4.06055 | GAGCCCGCCGAGAGC GTTCG GAT CGAAC TTTGCTTTGCCACGT Bphy_6815 1437640 - 1436486 - | monosaccharide-transporting ATPase Bphy_6816 1439277 - 1437739 - | ABC transporter related Bphy_6817 1440284 - 1439316 - | periplasmic binding protein/LacI transcriptional regulator Bphy_6818 1441396 - 1440428 - | periplasmic binding protein/LacI transcriptional regulator Bphy_6819 1442956 - 1441475 - | aldehyde dehydrogenase Bphy_6820 1444855 - 1443047 - | glucose-methanol-choline oxidoreductase TERM 1040 1444882 - 1444911 + H 71 -10.7 -3.54935 | gap 1, overlap 1444901 GCCCGTTCCAGCGCC TTCGGCCCGTCAGC GGT GC-GTCGGGTCGAA TTTGAGCCGCCTTTG Bphy_6821 1445070 - 1445360 + | antibiotic biosynthesis monooxygenase TERM 1041 1445663 - 1445679 + G 82 -5.7 -4.82901 | opp_overlap 1445649 GCATCAGGCGACGCT CGTGGCC GAC GGCTTCG TTTTTCTCGAGGCGC Bphy_6822 1445640 - 1446470 + | SMP-30/gluconolaconase/LRE domain-containing protein TERM 1042 1446488 - 1446464 - f 71 -11.5 -3.1996 | TAAAGCCGAATTGAA TGCATAGAGTC CAG GACTCTGTGCA GAACCTCGAACGCAA TERM 1043 1446656 - 1446638 - f 90 -10.3 -4.64598 | opp_overlap 1446637 CAAGCACCTTAAAAA TCCCTCG CATTC CGAGGGA GTAACTTTACGGAGA Bphy_6823 1446681 - 1447457 + | short-chain dehydrogenase/reductase SDR TERM 1044 1447650 - 1447638 - f 76 -4.7 -4.86731 | opp_overlap 1447647 TGCCTCGAAATAAAA GCGGG CCA CTCGC ACTATCGCGATTTGT Bphy_6824 1448011 - 1449063 + | alcohol dehydrogenase Bphy_6825 1450044 - 1449274 - | hypothetical protein TERM 1045 1449366 - 1449345 - G 81 -10.9 -4.15044 | gap 1, opp_overlap 1449363 GCCCCTGCGAACAAA GCGCTCC-GA CCG TCAGGAGCGC CTCGCGAGTTGTTCG TERM 1046 1449870 - 1449886 + g 70 -10.9 -3.40403 | opp_overlap 1449857 ATGAGCGGCGACGTC TCTGCAG AGC CTGCAGA TTGTGCTGCGGAGGC TERM 1047 1450217 - 1450247 + r 87 -9.8 -4.59773 | GTGTCAGGCGCGCGC CGAAGCTATGCG AATGACG CCCATAGCTTCG TTTTTGCGAATGCAA Bphy_6826 1450592 - 1450317 - | hypothetical protein Bphy_6827 1450905 - 1451798 + | LysR family transcriptional regulator Bphy_6828 1451888 - 1452196 + | hypothetical protein Bphy_6829 1452873 - 1452370 - | hypothetical protein Bphy_6830 1453680 - 1454864 + | major facilitator transporter Bphy_6831 1455179 - 1456660 + | aldehyde dehydrogenase TERM 1048 1456737 - 1456756 + F 100 -15 -5.7946 | TTTTTCTCCTGGGTT CGCCCGCA TCCG TGCGGGCG TTTTTTTATTGGGAG TERM 1049 1457974 - 1457944 - f 72 -6 -4.38712 | overlap 1457971 GGCACCTCGAGAAAA TGCGACTCGACGCA GAT CGCGACAAAGCGCA CGATACGGTAATGTC Bphy_6834 1458050 - 1458967 + | 6-phosphogluconate dehydrogenase NAD-binding Bphy_6835 1458964 - 1459845 + | 6-phosphogluconate dehydrogenase NAD-binding TERM 1050 1459919 - 1459865 - f 100 -9.1 -5.14965 | gap 1, overlap 1459866 AGGTGCATGAAAAAA GGTGGCGGCGCGACTGCGCCGAGCCC GCTC GGTGTGGGCGTAGTCGCGCAGC-AGC GTTGAAGTTTCGCCG TERM 1051 1459919 - 1459866 - f 75 -10.7 -3.68256 | overlap 1459865 GGTGCATGAAAAAAG GTGGCGGCGCGACTGCGCCGAGCCC GCTC GGTGTGGGCGTAGTCGCGCAGCAGC GTTGAAGTTTCGCCG TERM 1052 1460063 - 1460049 - f 78 -8.6 -4.20148 | overlap 1460035 ACGATTTCAAAACAA GCGTTT TAC AAACGC GGATGTCTTCCCGTG TERM 1053 1460635 - 1460645 + G 74 -5.4 -4.57073 | opp_overlap 1460635 GGCCTTTCCTGAAAA TGGT CGC ACCA TTTTTCGAGGCAATC Bphy_6836 1460270 - 1461568 + | type III effector Hrp-dependent outers TERM 1054 1463021 - 1463059 + T 74 -11.1 -3.59979 | gap 1, overlap 1463024 1463051 GCCGACGGGTCCGGT CAATCGTCAGATTGACGC GACC GCGTCGATC-GGCGATGG TTTCCAATCGGCGCC TERM 1055 1463160 - 1463182 + T 100 -14.2 -5.00616 | opp_overlap 1463160 AGATACGTCGGAAAA CGTGAGGCGT CAC ATGCCTCACG TTTTTTCCGCACGAC TERM 1056 1463182 - 1463160 - T 90 -12 -4.10925 | opp_overlap 1463160 AGATACGTCGGAAAA CGTGAGGCGT CAC ATGCCTCACG TTTTTTCCGCACGAC Bphy_6839 1464035 - 1463211 - | transposase IS4 family protein Bphy_6840 1464120 - 1465574 + | aldehyde dehydrogenase Bphy_6842 1467767 - 1466346 - | aldehyde dehydrogenase TERM 1057 1467445 - 1467471 + g 78 -14.4 -3.28791 | opp_overlap 1467447 AACGCCTGCTTGAAG GATCCGAGCGCC GCC GGCGCGTGGATC TTCTGCGAAACAGGT Bphy_6843 1468247 - 1467993 - | hypothetical protein TERM 1058 1468539 - 1468519 - H 72 -4.6 -4.59853 | gap 1 CGAACGCTGTAAAAA CGGG-CGGC TTTT GACGACCCG GCGCTTGTTGTGAGG Bphy_6844 1468569 - 1469498 + | LysR family transcriptional regulator TERM 1059 1469515 - 1469547 + T 100 -16.3 -4.40358 | opp_overlap 1469515 1469533 GCCGACCTCACGCAA TGCGCCTCTGAGCAG GAA CGTCTCAGAGGCGCA TTTTGTAACGTGCGT TERM 1060 1469547 - 1469515 - T 88 -16.3 -3.06796 | opp_overlap 1469515, overlap 1469533 GCCGACCTCACGCAA TGCGCCTCTGAGCAG GAA CGTCTCAGAGGCGCA TTTTGTAACGTGCGT Bphy_6845 1470587 - 1469622 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1061 1470291 - 1470279 - G 81 -9.1 -4.25566 | AAGAATCAGCGAAAA TGCCG TGT CGGCA GTGGACTCGGTCAGG Bphy_6846 1471520 - 1470723 - | HpcH/HpaI aldolase Bphy_6847 1472386 - 1471727 - | Asp/Glu/hydantoin racemase TERM 1062 1471874 - 1471886 + g 82 -6.9 -4.61231 | opp_overlap 1471862 1471861, overlap 1471861 AACCTGCTCCGCGAG CGCGG AGA TCGCG TTTTTCACGATCTCA TERM 1063 1472463 - 1472430 - R 86 -11.7 -4.03234 | gap 1, overlap 1472432 TTGTTGGGACAGAAA CATCGGGG-GCGCGTC TTC AACGCACACCCCGAAG GCATCAGAACGTCGG TERM 1064 1472461 - 1472432 - R 81 -12.9 -3.61232 | gap 1, overlap 1472430 GTTGGGACAGAAACA TCGGGG-GCGCGTC TTC AACGCACACCCCGA AGGCATCAGAACGTC Bphy_6848 1473309 - 1472467 - | hypothetical protein Bphy_6849 1474937 - 1473555 - | MmgE/PrpD family protein TERM 1065 1475290 - 1475268 - R 71 -7.6 -4.09511 | overlap 1475258 1475255 1475269 AACAGGCCGCGAAAA TGGCGCAGCT GCC AGCTGAGCCT CGCTATCCGGATCCG Bphy_6850 1476850 - 1475387 - | EmrB/QacA family drug resistance transporter TERM 1066 1476367 - 1476357 - G 88 -8.2 -4.63932 | overlap 1476344 TAGGTTGTAAGAAAA CCGC CTA GCGG GGGACCTAGCACCGG Bphy_6851 1478468 - 1477011 - | aldehyde dehydrogenase Bphy_6852 1479529 - 1478507 - | alcohol dehydrogenase Bphy_6853 1480949 - 1479657 - | major facilitator transporter TERM 1067 1481878 - 1481845 - R 93 -11.9 -4.3739 | gap 1, opp_overlap 1481851, overlap 1481851 CATCGTGGCAGAAAA CAAAAACCACCCG-CT TTA AGACGGGTGGTTTTCA GCATCGGATTTCTGC TERM 1068 1481851 - 1481872 + r 88 -10.9 -4.11394 | gap 1, opp_overlap 1481845 1481851 GGCAGAAAACAAAAA CCACCCG-CT TTA AGACGGGTGG TTTTCAGCATCGGAT TERM 1069 1481872 - 1481851 - R 100 -10.9 -5.54907 | gap 1, opp_overlap 1481851, overlap 1481845 GGCAGAAAACAAAAA CCACCCG-CT TTA AGACGGGTGG TTTTCAGCATCGGAT Bphy_6854 1482909 - 1481899 - | hypothetical protein TERM 1070 1485770 - 1485785 + r 74 -6 -4.43844 | opp_overlap 1485763, overlap 1485771 GTCATAAAGGAGGAT CGCGGG ACAA CCCGCC TTTTGTAACTGCTCC Bphy_6856 1487010 - 1485865 - | ferredoxin TERM 1071 1486827 - 1486801 - G 79 -5.9 -4.61231 | gap 2, overlap 1486802 1486819 CGATACCGTCAAAAA CTGCCC-CG-GCT CGA AGCACACGGGCAG GCCTTCGCCGGTGCG TERM 1072 1487065 - 1487047 - R 77 -11.7 -3.53012 | CCGTGGGCGCGCAAA CGCGCTG CGTAC CAGCGCG AAAACTGATCCACGT Bphy_6857 1488281 - 1487025 - | Rieske (2Fe-2S) domain-containing protein TERM 1073 1487657 - 1487679 + g 81 -9.9 -4.21812 | gap 1 ATTCCGGATGCGTGC CCGCGCAGTG ATAA CACT-CGCGG TTATTTTCGATCACG TERM 1074 1488360 - 1488371 + r 70 -3.6 -4.65933 | overlap 1488359 GATTGACGAAAAACT GCGT CAAC GCGC TTTATTTTCGGCCTC Bphy_6858 1489323 - 1488400 - | LysR family transcriptional regulator Bphy_6859 1490506 - 1489358 - | extracellular ligand-binding receptor Bphy_6860 1490939 - 1490529 - | anti-ECFsigma factor, ChrR TERM 1075 1490601 - 1490638 + g 81 -11.9 -3.85698 | overlap 1490595 GCATCCTTGCGCCGA CGACGTGCTATGCCGCG AGCC CGCCGCGTAGCACACCG TTTGTCCGGGAAGGA Bphy_6861 1492055 - 1491003 - | AraC family transcriptional regulator Bphy_6862 1493116 - 1492115 - | LysR family transcriptional regulator Bphy_6863 1494061 - 1493270 - | NADP oxidoreductase coenzyme F420-dependent TERM 1076 1493529 - 1493477 - G 83 -5.6 -4.84761 | gap 3, opp_overlap 1493483, overlap 1493465 ATAGCCGGACAAAAA CGCCCGCG-CGTCGGCATAGTCGAG GCCTTG CTCGACGA-GCC-ACGACGCCTGCG CTTCGAGCACCGCGT TERM 1077 1493914 - 1493937 + g 100 -6.7 -5.26875 | overlap 1493914 1493915 CGCGGATACGCGCAT C-GCGCGCGGC CAAT GCCGC-CGCCG TTTTTTCATTGCGCG TERM 1078 1494103 - 1494065 - R 76 -13.2 -3.14344 | gap 1, opp_overlap 1494068, overlap 1494067 GAGTTCTCGCATGAA TAGCGCGCAAGCGCGGC GATGAA GCCGCACTTGCGCG-TG TGTCGAACAGGCTCA TERM 1079 1494102 - 1494067 - R 100 -18.3 -3.13403 | opp_overlap 1494068, overlap 1494065 GTTCTCGCATGAATA GCGCGCAAGCGCGGC GATGAA GCCGCACTTGCGCGT GTGTCGAACAGGCTC TERM 1080 1494068 - 1494101 + r 100 -19.6 -2.87211 | opp_overlap 1494067 1494065 TTCTCGCATGAATAG CGCGCAAGCGCGGC GATGAA GCCGCACTTGCGCG TGTGTCGAACAGGCT Bphy_6864 1495609 - 1494116 - | aldehyde dehydrogenase TERM 1081 1494260 - 1494287 + g 73 -12.6 -3.32268 | GCAGTTGACCGTCAC GGTGCCCGCGCG AATC CGCGCCGCCACC TTGTGCGCGTGGTTC Bphy_6865 1496958 - 1495627 - | FAD dependent oxidoreductase Bphy_6866 1497852 - 1496965 - | dihydrodipicolinate synthetase Bphy_6867 1499212 - 1497917 - | glycine hydroxymethyltransferase TERM 1082 1498487 - 1498511 + g 77 -12.7 -3.37796 | opp_overlap 1498487, overlap 1498489 1498510 GTTGGTGAGGATGAA GCCGCCGCGCG GGC CGCGCAGCGTC TTGTGCGTGGTGGAC TERM 1083 1498511 - 1498487 - G 83 -14.9 -3.21099 | opp_overlap 1498487 1498489 1498510 GTTGGTGAGGATGAA GCCGCCGCGCG GGC CGCGCAGCGTC TTGTGCGTGGTGGAC TERM 1084 1498489 - 1498509 + g 78 -13.9 -3.25896 | opp_overlap 1498487, overlap 1498487 TGGTGAGGATGAAGC CGCCGCGCG GGC CGCGCAGCG TCTTGTGCGTGGTGG Bphy_6868 1500173 - 1499292 - | substrate-binding region of ABC-type glycine betaine transport system Bphy_6869 1501151 - 1500267 - | binding-protein-dependent transport systems inner membrane component TERM 1085 1501088 - 1501071 - G 72 -8.3 -4.07885 | CAGTGCGGCCGAAAA CGCGTCG AAGC CGCCGCG AAAATGTTGAAAGAG Bphy_6870 1502437 - 1501148 - | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 1086 1502478 - 1502495 + H 71 -7.7 -4.05446 | gap 1, opp_overlap 1502491 GAAATTGGCATCGCG CGTCGGGT ATA ACCCG-CG TTTGTCATTGCGCGG Bphy_6871 1503561 - 1504163 + | restriction endonuclease Bphy_6872 1504199 - 1505887 + | hypothetical protein Bphy_6873 1506107 - 1506853 + | heat shock protein DnaJ domain-containing protein Bphy_6874 1508893 - 1507214 - | hypothetical protein Bphy_6875 1510688 - 1509462 - | porin Bphy_6876 1512056 - 1510722 - | major facilitator transporter TERM 1087 1512067 - 1512088 + r 88 -11.5 -4.19746 | overlap 1512068 TGCATGTGTCTCTCC ACTGGCGGG CGCG CCCGCCAGG TTCTTTTGAAATCGG TERM 1088 1512068 - 1512087 + r 85 -15 -3.11366 | overlap 1512067 GCATGTGTCTCTCCA CTGGCGGG CGCG CCCGCCAG GTTCTTTTGAAATCG Bphy_6877 1513359 - 1512115 - | 6-phosphogluconolactonase TERM 1089 1513250 - 1513230 - G 79 -10.3 -4.07568 | overlap 1513231 GGTCCTCCGCGAAAA CCGGCCCGG CGA CCGCGCCGA TCGCGGCCAATGCGC TERM 1090 1513278 - 1513316 + g 93 -5.9 -5.252 | gap 1, opp_overlap 1513291 1513292, overlap 1513280 CGCCAAGCGCCGCGG CTTG-CTGAACGAAGCGC CGCC GCGCATCGTTCGGGCCCG TTTTTTCTGGCGGTG Bphy_6878 1513436 - 1516060 + | aconitate hydratase domain-containing protein TERM 1091 1516227 - 1516255 + G 74 -11 -3.57144 | opp_overlap 1516204 1516201 CGGCGCGCATCTGCC CGCGCAGATGCT GGCCG ACCGTCTGCGCG TTTCACGCTCGCCCG Bphy_6879 1516150 - 1517043 + | GntR family transcriptional regulator TERM 1092 1517208 - 1517175 - g 71 -13.2 -3.02144 | gap 1 CGATTCTCGCCAACA GGCACGCCGAAACGG GCGAA CCGTT-CGGCGTGTC CATCGATCTGGCGCG Bphy_6880 1517084 - 1517818 + | extracellular solute-binding protein TERM 1093 1518406 - 1518377 - f 73 -3.5 -4.83615 | opp_overlap 1518380, overlap 1518378 TATTTTTCAGAAAAA CTCGCCGGACGAA CGGC TTTATCCGGCAAT GTAATGAAATCGCTC Bphy_6881 1518576 - 1518923 + | hypothetical protein Bphy_6882 1519052 - 1519531 + | hypothetical protein Bphy_6883 1519562 - 1519879 + | hypothetical protein TERM 1094 1519972 - 1519949 - f 100 -8.8 -4.90906 | CGAGAAGAGGAAAAA GAGCCCGCCA GATG TGACGGCCTC CTGCAAATTCTCACC Bphy_6884 1520420 - 1521184 + | hypothetical protein TERM 1095 1521242 - 1521214 - T 80 -4.5 -4.88388 | overlap 1521204 ACAATTCGACAAAAA CTGATTTTGCGAC GCA GTCTCAGACTCAG TATCGAAGCGCCAGC TERM 1096 1521270 - 1521250 - T 100 -18.3 -3.10343 | opp_overlap 1521245 1521242 AGACTCAGTATCGAA GCGCCAGCG AGC CGCTGGCGC CAAAATCCTTATCGC Bphy_6885 1522472 - 1521429 - | hypothetical protein Bphy_6886 1524324 - 1523758 - | hypothetical protein TERM 1097 1524768 - 1524748 - H 79 -12.5 -3.33696 | opp_overlap 1524763 GCTCGGTTCAATGAA GCCTCGCGT GTC ACGCGCGGC CGGCCCGCCTGCGTA Bphy_6887 1525211 - 1525483 + | hypothetical protein Bphy_6888 1525511 - 1525750 + | hypothetical protein Bphy_6889 1525928 - 1527163 + | thioredoxin-disulfide reductase Bphy_6890 1527222 - 1527494 + | hypothetical protein TERM 1098 1527496 - 1527528 + T 78 -11.2 -3.71848 | gap 1, overlap 1527497 AACTTGAACCTTGAG GGCGACG-CCCCCGC ACGG GCGGGCGACGTCGCG TTATTGATCGCACCA TERM 1099 1527497 - 1527527 + T 80 -14.7 -2.82895 | gap 1, overlap 1527496 ACTTGAACCTTGAGG GCGACG-CCCCCGC ACGG GCGGGCGACGTCGC GTTATTGATCGCACC Bphy_6891 1530381 - 1527547 - | ATPase TERM 1100 1528325 - 1528361 + g 71 -8.1 -4.07568 | gap 2 AGCGCGTTCTCGTCG CCGAACAC-CGAA-GCG GCTAA CGCCTTCGCGAGTTCGG TTTTACCCACACCCG TERM 1101 1530311 - 1530322 + g 70 -5.8 -4.21908 | CACAGCATCAGCTGA CGGT GTTG ACCG TTTTCGGTGATCGTG TERM 1102 1530639 - 1530668 + r 100 -12.1 -4.42386 | ATACGCCGGGATGCT CGTAGGCGCGC TGACATGC GCGCGCCAACG TTTTGTCGATCCAAC Bphy_6892 1531377 - 1530904 - | heat shock protein Hsp20 Bphy_6893 1532269 - 1531694 - | hypothetical protein Bphy_6894 1532658 - 1532993 + | hypothetical protein TERM 1103 1533004 - 1533023 + T 70 -12.2 -2.75844 | opp_overlap 1532980, overlap 1533003 AGTGACCTATGTCTC GCATCGTC CGTG GACGATGC ATTTGACGTGCGACA Bphy_6895 1533576 - 1533082 - | MgtC/SapB transporter Bphy_6896 1534031 - 1534858 + | AraC family transcriptional regulator Bphy_6897 1535756 - 1535103 - | transport-associated Bphy_6898 1536174 - 1536704 + | putative membrane protein TERM 1104 1537207 - 1537197 - f 84 -2.4 -5.36441 | CCCGCAGATAAAAAA TCGC CAT GCGC GCGGAGGGAGTGGCA Bphy_6899 1537202 - 1537468 + | hypothetical protein TERM 1105 1537545 - 1537535 - f 71 -6.8 -4.16785 | ATATGACAAAGGAAA GTCG CGT CGAC ATCGGGAAGTCGAAA Bphy_6900 1537966 - 1539180 + | NADH:flavin oxidoreductase/NADH oxidase Bphy_6901 1539164 - 1539625 + | hypothetical protein Bphy_6902 1541578 - 1540112 - | transcriptional regulator TERM 1106 1540401 - 1540385 - G 71 -7.9 -4.15698 | opp_overlap 1540399, overlap 1540386 CACCCATAGAAAGAA TCCGCCC GGC GGCCGGA CCACTAGTGTCCCTT TERM 1107 1541258 - 1541230 - G 72 -13.1 -3.12668 | overlap 1541222 TGCCAAACGGGAACA GCTGGGCGCTTGG CTC CGAAGCGCCAAGC CCCGGATGCGCGCAT Bphy_6903 1543200 - 1541644 - | diguanylate phosphodiesterase TERM 1108 1542357 - 1542340 - G 74 -11.3 -3.65046 | GTCCCACCGCAACAA TGCGTCG ATGC CGACGCA CCTGGCCCGCCTGAT TERM 1109 1543540 - 1543572 + G 71 -9.8 -3.77196 | gap 1, overlap 1543543 1543544 TCGGTTCGCGCGGCG TGCGCGGCGTGGGGC GTGA GCCCCGCGACG-GTA TTTCGTGCCTACTAC TERM 1110 1543544 - 1543569 + G 71 -13.9 -2.67667 | overlap 1543543 1543540 TTCGCGCGGCGTGCG CGGCGTGGGGC GTGA GCCCCGCGACG GTATTTCGTGCCTAC TERM 1111 1544308 - 1544337 + G 79 -11.5 -3.90744 | gap 1, overlap 1544326 TACAACGAACTGCAT TTTGGCCCGGACCC AGT GCGTCCG-GCCAAA TTCTTTGACCGGAAA Bphy_6904 1543444 - 1544895 + | transcriptional regulator Bphy_6905 1546817 - 1544910 - | diguanylate cyclase with PAS/PAC sensor TERM 1112 1545895 - 1545917 + g 100 -10.4 -4.89233 | opp_overlap 1545891 1545895, overlap 1545900 CCCCGATGCAACGCA GCCTCCCGCG CAT CGCGCGCGGC TTTTTCCTGTTGGTC TERM 1113 1545985 - 1546017 + g 72 -3.2 -4.62392 | overlap 1545976 1545989 TCGCGGGCCGGCGTC GTCTGCTTCCGTGC CACCT GCACGCGCGCTGGC TTTCTTTGCTTGTTG TERM 1114 1546735 - 1546699 - G 87 -15.2 -3.5944 | gap 1, opp_overlap 1546691, overlap 1546703 ACGGATATTGGCAAA TTCAGCGCGCG-CGCGG CGAC CCGCGTCACGCGCTCAA AGTACTGATCGTCTT TERM 1115 1546731 - 1546703 - G 77 -16 -2.64981 | gap 1, opp_overlap 1546691, overlap 1546699 ATATTGGCAAATTCA GCGCGCG-CGCGG CGAC CCGCGTCACGCGC TCAAAGTACTGATCG Bphy_6906 1547779 - 1546847 - | diguanylate phosphodiesterase Bphy_6907 1549495 - 1548599 - | FRG domain-containing protein TERM 1116 1548941 - 1548929 - G 71 -9.1 -3.69437 | overlap 1548925 CAACGGGAAAAGGAA GCAGC CCT GCTGC ACCGAGATGCGCTGA TERM 1117 1550774 - 1550793 + Gr 93 -9.2 -4.82901 | CGACGGCGCGATTGC GCGTGCGG ACGG CGGCACGC TTTTTCTCGACGAAA Bphy_6909 1552230 - 1551430 - | amidohydrolase 2 Bphy_6908 1550118 - 1551500 + | response regulator receiver protein TERM 1118 1552323 - 1552334 + FH 74 -7.2 -4.36914 | opp_overlap 1552301, overlap 1552322 CGAGTTCCGATCCTT CGCC CGGC GGCG TTTTATCCGCAGAGG Bphy_6910 1552447 - 1553010 + | hypothetical protein Bphy_6911 1554713 - 1553091 - | hypothetical protein Bphy_6912 1556064 - 1554754 - | hypothetical protein Bphy_6913 1557154 - 1556102 - | hypothetical protein TERM 1119 1557820 - 1557843 + H 72 -8.8 -3.85817 | CAAATGGCGGTGCGT CGGTTGCAGA TTGC TCTGCTGCCG TTTGTACAGCCGCGT Bphy_6914 1558261 - 1560303 + | initiation factor 2 associated domain-containing protein Bphy_6915 1561420 - 1560812 - | diguanylate cyclase Bphy_6916 1562005 - 1561445 - | putative diguanylate cyclase (GGDEF) Bphy_6917 1562202 - 1562636 + | hypothetical protein TERM 1120 1563282 - 1563267 - g 85 -4.6 -5.0133 | opp_overlap 1563273 1563274 1563275, overlap 1563269 CATTGGTCGAAAAAA CGCAGC CTGT GCTGAG CGCACTGTATTTTTA Bphy_6918 1562657 - 1565200 + | TPR repeat-containing protein TERM 1121 1565294 - 1565264 - T 73 -11.9 -3.12874 | gap 1, overlap 1565252 1565284 AGACAGACGAGGTAA CGACGCGTCCGCTC CATA GAGCGGACAC-CCG CAAGATCGAAGAGTA Bphy_6919 1565942 - 1565517 - | hypothetical protein Bphy_6920 1566466 - 1565951 - | hypothetical protein TERM 1122 1565995 - 1566005 + g 78 -3.2 -4.8667 | opp_overlap 1565966, overlap 1565966 1565990 GGGAATCGTAGTCGG CGAG CGG CTTG TTTTTGTCGCGTATG Bphy_6922 1566699 - 1567340 + | putative lipoprotein transmembrane TERM 1123 1567727 - 1567750 + G 82 -6 -4.7629 | gap 1 AGTCGACGATAACGT TGGCCGGCG CATTCCT CGC-GGCCA TTTTTGCGTTCATAC Bphy_6923 1567456 - 1567809 + | hypothetical protein Bphy_6924 1567818 - 1568387 + | hypothetical protein TERM 1124 1568413 - 1568391 - T 87 -7.6 -4.73108 | overlap 1568392 1568393 1568395 CCCACAAAATGAAAA TCGACGTCGC CGC GCGACGTCCT AGAGCAACCGAACCG TERM 1125 1568412 - 1568392 - T 73 -11.1 -3.4278 | overlap 1568391 1568393 1568395 CCACAAAATGAAAAT CGACGTCGC CGC GCGACGTCC TAGAGCAACCGAACC TERM 1126 1568411 - 1568393 - T 78 -14.6 -2.64584 | overlap 1568392 1568391 1568395 CACAAAATGAAAATC GACGTCGC CGC GCGACGTC CTAGAGCAACCGAAC Bphy_6925 1569491 - 1568673 - | hypothetical protein Bphy_6926 1570158 - 1569826 - | XRE family transcriptional regulator TERM 1127 1570537 - 1570505 - g 77 -11.3 -3.72968 | overlap 1570507 1570510 ATTACGACACGCAAA CACACGCAGACAACG TGG CGTTGTCCGCCTGTC GAGCAGCGGCGCGGC TERM 1128 1570535 - 1570507 - g 81 -13.9 -3.44487 | overlap 1570505 1570510 TACGACACGCAAACA CACGCAGACAACG TGG CGTTGTCCGCCTG TCGAGCAGCGGCGCG TERM 1129 1570532 - 1570510 - g 70 -14.2 -2.56838 | overlap 1570507 1570505 GACACGCAAACACAC GCAGACAACG TGG CGTTGTCCGC CTGTCGAGCAGCGGC Bphy_6927 1570348 - 1570884 + | hypothetical protein Bphy_6928 1570897 - 1571574 + | hypothetical protein Bphy_6929 1572347 - 1571697 - | hypothetical protein TERM 1130 1572684 - 1572658 - R 75 -8.8 -3.98113 | overlap 1572660 CAAGGATTAACGAAA CAGTATTCACCG ATC CGATGAATACTC CCACACTCCGTCCTT TERM 1131 1572682 - 1572660 - R 74 -11.4 -3.57246 | overlap 1572658 AGGATTAACGAAACA GTATTCACCG ATC CGATGAATAC TCCCACACTCCGTCC Bphy_6930 1573043 - 1572642 - | hypothetical protein TERM 1132 1573151 - 1573119 - R 79 -13.5 -3.08798 | overlap 1573135 ATGGGTGATTCAACA CCGCAACTACGGAAC ACG ACTCCGCAATTGCGG CATCAACAAGCATCA Bphy_6931 1574116 - 1573154 - | hypothetical protein Bphy_6932 1575494 - 1574403 - | hypothetical protein TERM 1133 1575459 - 1575441 - G 71 -10.4 -3.65812 | opp_overlap 1575440 1575441 GTGTGCGTAAGACAA CAAAAACC ATA GGTTTTTG ATTGGTATCGGAGTC Bphy_6933 1577845 - 1575500 - | ATPase TERM 1134 1577899 - 1577869 - R 79 -12.6 -3.21593 | opp_overlap 1577864 1577873, overlap 1577867 1577871 1577873 TACTTCGCGACAATA GACATGCGCGACTG TCG CAGTCGCGCATTTG TGAGAGTTTTGTCGT TERM 1135 1577897 - 1577871 - R 85 -15.2 -3.17146 | opp_overlap 1577864 1577873, overlap 1577869 1577867 1577873 CTTCGCGACAATAGA CATGCGCGACTG TCG CAGTCGCGCATT TGTGAGAGTTTTGTC TERM 1136 1577895 - 1577873 - R 91 -17.8 -3.14745 | opp_overlap 1577864 1577873, overlap 1577871 1577869 1577867 TCGCGACAATAGACA TGCGCGACTG TCG CAGTCGCGCA TTTGTGAGAGTTTTG TERM 1137 1577873 - 1577895 + r 100 -17.8 -3.92143 | opp_overlap 1577873 1577871 1577869 1577867, overlap 1577864 TCGCGACAATAGACA TGCGCGACTG TCG CAGTCGCGCA TTTGTGAGAGTTTTG Bphy_6934 1578582 - 1577920 - | hypothetical protein TERM 1138 1578976 - 1578990 + H 70 -4.3 -4.64766 | ATCGTTACGATTTTC GACAA TAAAT TTGTC TTTTTAAAATCTACC TERM 1139 1579079 - 1579097 + H 78 -3 -5.10461 | opp_overlap 1579051 1579079, overlap 1579073 CGACCGCCTTGAAAA CTGCCTGC TGT GCACGGAG TTTTTGTTCGGTGGA TERM 1140 1580147 - 1580105 - g 90 -15.5 -3.61398 | gap 1 GCCTGCTTGCAACAA TGGAGCCGCGGCCCGCGGCG CGAC CGGCGCCAGC-GCGGCCCCA ATAGCGATTCGGCGG Bphy_6935 1579390 - 1580151 + | hypothetical protein TERM 1141 1580824 - 1580809 - g 78 -3.2 -4.91712 | overlap 1580782 1580821 CGGAAGCCAGAAAAA CGTGTT ACCG AACTCG CGACTCGCAGGACCC TERM 1142 1581292 - 1581270 - g 80 -9 -4.39426 | CACATCGCCAGAAAA GCGCGGCGCA GAA TGGGCCGGGC AATGGTAACGGCGTG Bphy_6936 1580771 - 1582375 + | peptidase S53 propeptide TERM 1143 1583182 - 1583169 - g 74 -2.3 -4.83615 | GAGGTTTGATAAAAA GACAG AGAT CTGGC AACGCGACGAGTACA Bphy_6937 1582507 - 1583832 + | hypothetical protein Bphy_6938 1584113 - 1585702 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 1144 1585928 - 1585944 + G 70 -7.9 -4.03234 | GACGGTGTTAAAGCG CCCGACG ACT CGTGGGG TTTCTCTGACGGCGC TERM 1145 1586624 - 1586608 - g 70 -7.3 -4.04209 | CGAAACGATCAGAAA TTCGCCA ATT TGGCAAA GCAGCATTCTTTTGG Bphy_6939 1585835 - 1587325 + | phospholipase C Bphy_6940 1588882 - 1587428 - | hypothetical protein TERM 1146 1588052 - 1588068 + g 77 -5.1 -4.70659 | GCCAAGACTGTGAGT CACGAAA ACG TATCGTG TTTTTGAATCTACAC TERM 1147 1590389 - 1590367 - g 71 -7.6 -4.15854 | overlap 1590355 1590368 AAACGCATCCTAAAA CGGTGCGCAC CAA ATGCGCGCCA ATGAGCGGTCGCTGA Bphy_6941 1589524 - 1590393 + | hypothetical protein TERM 1148 1590479 - 1590518 + T 81 -11.3 -3.82218 | opp_overlap 1590469 1590480 1590481, overlap 1590480 AAAAATCGTCGATAA ACCGAGGGCGAGCGCGC AGATTC GTCCGCTCGCCCTCGCC TTTCGTGCTGTCGCT TERM 1149 1590517 - 1590480 - T 93 -13.3 -3.88985 | opp_overlap 1590479 1590480, overlap 1590469 1590481 AAAATCGTCGATAAA CCGAGGGCGAGCGCGCA GATT CGTCCGCTCGCCCTCGC CTTTCGTGCTGTCGC TERM 1150 1590480 - 1590517 + T 82 -14.8 -2.88849 | opp_overlap 1590480 1590469 1590481, overlap 1590479 AAAATCGTCGATAAA CCGAGGGCGAGCGCGC AGATTC GTCCGCTCGCCCTCGC CTTTCGTGCTGTCGC TERM 1151 1590516 - 1590481 - T 88 -16.8 -2.92668 | opp_overlap 1590480 1590479, overlap 1590480 1590469 AAATCGTCGATAAAC CGAGGGCGAGCGCGCA GATT CGTCCGCTCGCCCTCG CCTTTCGTGCTGTCG Bphy_6942 1590762 - 1590577 - | cold-shock DNA-binding domain-containing protein TERM 1152 1591230 - 1591218 - H 71 -7.7 -4.07568 | TGCCTGCCCGCAAAA TCTGC TCT GCAGA CCATAGCGCGTCCGC Bphy_6944 1591628 - 1591921 + | hypothetical protein Bphy_6945 1592040 - 1592258 + | hypothetical protein Bphy_6946 1592451 - 1594820 + | PAS/PAC sensor hybrid histidine kinase TERM 1153 1594924 - 1594966 + T 100 -14.2 -4.55023 | opp_overlap 1594934, overlap 1594934 CCGCAACGGGCGAGC CATAGAAAAATGCGCGACTG TGA CAGTCGCGCATTTGTCAGAG TTTTATCGTATTCCC TERM 1154 1594956 - 1594934 - T 100 -17.8 -4.99035 | opp_overlap 1594924 1594934 CGAGCCATAGAAAAA TGCGCGACTG TGA CAGTCGCGCA TTTGTCAGAGTTTTA TERM 1155 1594934 - 1594956 + T 100 -17.8 -3.92143 | opp_overlap 1594934, overlap 1594924 CGAGCCATAGAAAAA TGCGCGACTG TGA CAGTCGCGCA TTTGTCAGAGTTTTA Bphy_6947 1595643 - 1594981 - | hypothetical protein TERM 1156 1595183 - 1595217 + g 75 -2.9 -4.77438 | gap 2, overlap 1595184 1595185 ATGGTCTCCCAATCG TG-CGGTGT-CACCACG CGC CGCGGTGCACATCGATA TTTTTCGTCCTGCAT TERM 1157 1596158 - 1596144 - R 75 -4.2 -4.84359 | overlap 1596145 CGAGGGCGAGAAAAA CTGCCC ACT AGGCAA CGAGTTTTCAATCGA TERM 1158 1596857 - 1596831 - R 86 -12.2 -4.05033 | opp_overlap 1596832 TGCACCCGAGATAAA GACGCGCGAACG CTT CGCTCGGGCGCC AGCGGTGCAGTCCTC TERM 1159 1596927 - 1596902 - R 100 -14.1 -5.40474 | gap 1, opp_overlap 1596902 AGCGCGGCAAAAAAA TGCGCGACTGAC CGC GTC-GTCGCGCA TTTGAGAGTGGTAAC TERM 1160 1596902 - 1596927 + r 88 -14.1 -3.58343 | gap 1, opp_overlap 1596902 AGCGCGGCAAAAAAA TGCGCGACTGAC CGC GTC-GTCGCGCA TTTGAGAGTGGTAAC TERM 1161 1597098 - 1597119 + r 71 -11.5 -3.29144 | opp_overlap 1597093 GCCGGGAATATCTGA CGTCGCCTG TCAG CGGGCGGCG TTATAGAGCCAATCC Bphy_6949 1600172 - 1598088 - | resolvase domain-containing protein Bphy_6950 1600895 - 1600443 - | hypothetical protein Bphy_6951 1601293 - 1601084 - | hypothetical protein Bphy_6953 1602828 - 1604045 + | integrase family protein Bphy_6954 1604042 - 1605019 + | integrase family protein Bphy_6955 1605016 - 1606047 + | integrase family protein Bphy_6956 1607705 - 1606485 - | putative transposase Bphy_6957 1608592 - 1607714 - | integrase family protein TERM 1162 1608789 - 1608758 - R 100 -19 -3.40522 | opp_overlap 1608755 1608767 AGCGGTTTAGTACAA GTCCAGTAATGTTG CGCG CAACATTACTGGAC GACTTCGCTGTCAAA Bphy_6958 1609670 - 1608972 - | hypothetical protein TERM 1163 1609055 - 1609038 - G 70 -5.5 -4.32903 | overlap 1609040 1609052 AGGAAACAGTGAAAA CGCGGTT GCCA AACCGGG CAAAAAACCGCATTC Bphy_6959 1610615 - 1610292 - | hypothetical protein Bphy_6960 1610929 - 1610714 - | hypothetical protein Bphy_6961 1611252 - 1610926 - | hypothetical protein Bphy_6962 1611991 - 1611455 - | hypothetical protein Bphy_6963 1612143 - 1612649 + | hypothetical protein TERM 1164 1612809 - 1612783 - f 78 -6.6 -4.63184 | AAGCCACCCCAAAAA TGAACAAACAGA CCT TCCGTCTGTACA CCTAAATTATCAAGT Bphy_6964 1613303 - 1613749 + | hypothetical protein TERM 1165 1615041 - 1614984 - g 75 -6.4 -4.33151 | gap 2, opp_overlap 1615025, overlap 1614986 TATGACAAGGTAAAA CTCGA-ACGCGACTGGCAG-CTGA TACAGCCAATCC TCAGACCGCCTGTCGCGTATCGGG TCATGCTTCCTCAGT TERM 1166 1616699 - 1616684 - g 87 -7.6 -4.72272 | TGCGGGGATCAAAAA GTTGTC GACA GACAAC ATTCGCGAAGCCAGC TERM 1167 1616738 - 1616727 - g 82 -7.2 -4.62336 | AGCGCACGTGAAAAA GCGC TGGA GCGC ATGGGAGCAGCGGGA Bphy_6966 1614741 - 1616927 + | hypothetical protein TERM 1168 1617037 - 1617026 - f 90 -7.2 -5.14965 | ATCGCCAGTAAAAAA GCGC TCGA GCGC GGACGTGATCCGTGG Bphy_6967 1617224 - 1618846 + | Tn7-like transposition protein C TERM 1169 1618918 - 1618880 - f 77 -13.9 -2.90075 | gap 1 TCTGCGCTAACGATA TGCCCTCTCGCGGATCGC ACAC GCCTTCCGCGAGAG-GCA TCTCAGCTAACGGCC TERM 1170 1619490 - 1619463 - g 78 -12.8 -3.53012 | gap 1, overlap 1619465 1619466 CTCTTCTGCCGGAAA CACGGAAGGCTGC TAA GCAGCCTTCC-CG ACACCAACGATAGAT TERM 1171 1619489 - 1619465 - g 80 -14.3 -3.34398 | overlap 1619463 1619466 CTTCTGCCGGAAACA CGGAAGGCTGC TAA GCAGCCTTCCC GACACCAACGATAGA TERM 1172 1619488 - 1619466 - g 83 -17.8 -2.60496 | overlap 1619465 1619463 TTCTGCCGGAAACAC GGAAGGCTGC TAA GCAGCCTTCC CGACACCAACGATAG Bphy_6968 1619001 - 1620017 + | hypothetical protein TERM 1173 1620073 - 1620050 - f 70 -11.8 -2.81888 | gap 1, overlap 1620043 1620047 GGCCAAAGCCAATGA GGCGCATACCC ACT GGGTAT-CGCC GGAGGAAGACGCGAT TERM 1174 1620874 - 1620858 - g 73 -9.5 -3.92592 | overlap 1620872 ATTTGTAAGACCAAA CGGTTTT CTA AAAACCG ACACTATCCGTACCG TERM 1175 1620890 - 1620872 - g 71 -4.5 -4.56775 | overlap 1620858 1620881 ACGGTTTTCTAAAAA CCGACAC TATCC GTACCGG CATAATCGAGATGTA Bphy_6969 1620142 - 1621995 + | hypothetical protein TERM 1176 1622003 - 1622041 + T 100 -14.4 -4.11295 | opp_overlap 1622005, overlap 1622005 ATAAGTGACATATGA AAGTCCGGCCGTCCGCGC TAG GCGGGGCAGGCCGGACTC TTTGTGTGCGTTTCG TERM 1177 1622005 - 1622039 + T 100 -17 -3.64364 | opp_overlap 1622005, overlap 1622003 AAGTGACATATGAAA GTCCGGCCGTCCGCGC TAG GCGGGGCAGGCCGGAC TCTTTGTGTGCGTTT TERM 1178 1622039 - 1622005 - T 100 -17 -3.89614 | opp_overlap 1622005 1622003 AAGTGACATATGAAA GTCCGGCCGTCCGCGC TAG GCGGGGCAGGCCGGAC TCTTTGTGTGCGTTT Bphy_6970 1622406 - 1622140 - | hypothetical protein Bphy_6971 1622788 - 1622498 - | hypothetical protein Bphy_6972 1623807 - 1623094 - | integral membrane protein Bphy_6973 1625264 - 1624134 - | porin TERM 1179 1624578 - 1624601 + g 77 -11.6 -3.75024 | opp_overlap 1624576 GCCGTCGAAGAAGTT CGCCGCGGCG TTGG TGCCGCCGCG TTGTTCGTCGTAGGC Bphy_6974 1625706 - 1625948 + | hypothetical protein Bphy_6975 1625929 - 1626480 + | hypothetical protein TERM 1180 1626522 - 1626483 - T 77 -10 -3.90112 | opp_overlap 1626515 1626516, overlap 1626487 1626490 GCCCGTTCAATGAAA TGAAGTACTGCGAGCCTC GAAC GAGGCCCGCAGCAATCGA CGCGACCGCGGTTGT TERM 1181 1626518 - 1626487 - T 81 -13 -3.61468 | opp_overlap 1626515 1626516, overlap 1626483 1626490 GTTCAATGAAATGAA GTACTGCGAGCCTC GAAC GAGGCCCGCAGCAA TCGACGCGACCGCGG TERM 1182 1626515 - 1626490 - T 88 -16.9 -2.92098 | overlap 1626487 1626483 CAATGAAATGAAGTA CTGCGAGCCTC GAAC GAGGCCCGCAG CAATCGACGCGACCG TERM 1183 1626516 - 1626536 + T 78 -4 -4.87665 | gap 1, opp_overlap 1626487 1626483, overlap 1626515 GAACGAGGCCCGCAG CAATCGACG CGAC CG-CGGTTG TTTTTCTCAGTGCGC Bphy_6976 1627904 - 1626543 - | major facilitator transporter TERM 1184 1628056 - 1628083 + r 76 -12.8 -3.05384 | opp_overlap 1628064, overlap 1628055 1628064 TTGCCATGGGACGAC GCCGAGAACATC GCGC GATGTTCTCGGA TTGAATAAAAAAGCC TERM 1185 1628149 - 1628125 - R 75 -10.8 -3.74251 | gap 1, opp_overlap 1628120 1628117 GATATTTCGACGAAA TTCGCGCGTGC TGCT GCA-GCGCGAA CACGTTGTGAATTGT Bphy_6977 1629166 - 1628192 - | LysR family transcriptional regulator Bphy_6978 1629969 - 1629142 - | peptidase C26 TERM 1186 1629696 - 1629670 - G 76 -14.4 -3.14931 | opp_overlap 1629694 CGCAGCCTGCATCAA CCCGAGCGCAAC GTG GTCGCGGTCGGG ATCGACGAGCATGTC Bphy_6979 1631225 - 1629969 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1187 1631044 - 1631028 - G 71 -4.4 -4.56597 | gap 1 CTCTTCGTCGAAAAA CGCCTGC GAGC GCAG-CG GTAAACGCTCTTCGG Bphy_6980 1631553 - 1631230 - | ferredoxin Bphy_6981 1633016 - 1631580 - | glutamine synthetase catalytic region Bphy_6982 1634391 - 1633075 - | phthalate 4,5-dioxygenase Bphy_6983 1634776 - 1635507 + | GntR family transcriptional regulator Bphy_6984 1635635 - 1636324 + | nitroreductase Bphy_6985 1637355 - 1636633 - | short-chain dehydrogenase/reductase SDR TERM 1188 1636730 - 1636720 - G 70 -4.6 -4.38927 | overlap 1636721 CTCTGACAGAAGAAA CGCC ACG GACG CGGCCAATTCCTCAG Bphy_6986 1638061 - 1637402 - | metal dependent phosphohydrolase TERM 1189 1637784 - 1637772 - G 70 -4.7 -4.36914 | overlap 1637757 1637773 TGGCTGCGCAGAAAA TCGCG CGC CGCGT TGGCCCCGTCCACTT TERM 1190 1639577 - 1639550 - g 72 -8.4 -4.0162 | gap 1 CTGGTACACGAGAAA GCCGGGGCAGCAG GGG CTACTGCTC-GGC GTGACGAACCTGAAT Bphy_6987 1638243 - 1639652 + | transcriptional regulator Bphy_6988 1639770 - 1640186 + | cupin 2 domain-containing protein Bphy_6989 1640211 - 1640666 + | alkylhydroperoxidase Bphy_6990 1640695 - 1640955 + | hypothetical protein Bphy_6991 1642539 - 1641409 - | histidine kinase TERM 1191 1642976 - 1642938 - H 74 -13 -2.9176 | AATCCGATTGAGATA GCCGCCGGCCGCACGA GCGAGCA CCGAGAGGCCGGCAGC AGAGTCATCCGGTCA Bphy_6992 1643205 - 1644236 + | TRAP dicarboxylate transporter- DctP subunit TERM 1192 1645405 - 1645434 + G 72 -8.5 -4.07568 | overlap 1645408 TGCCCGCGGCCGTGC TTGCCGCGGCGCT GGCG ATCGTCGCGGTGA TTTTCGGGCGCCGCA Bphy_6993 1644252 - 1646147 + | TRAP dicarboxylate transporter, DctM subunit TERM 1193 1646920 - 1646871 - g 100 -20 -3.30441 | gap 1, opp_overlap 1646875 GATGATCGTGGAGAA CGGCCGCGCGCTCGCGCGTCTGC TCGCG GCAGACG-ACGCGCGCCCGACCG GCATCGTCGCCGTCA TERM 1194 1647204 - 1647171 - g 86 -16 -3.2794 | gap 1 CTTCACGGATATCAA GCTCGTGGCGCGCGA GTCGG TCGCGCGCC-CGGGC AAAACTGCGGCGAAA Bphy_6994 1646167 - 1647246 + | LacI family transcription regulator Bphy_6995 1647251 - 1648258 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1195 1649028 - 1649012 - g 79 -10.1 -4.18018 | TGCGGCTAGTGAAAA GCGACGA GAT TCGCCGC AAGATACTCATCGAT Bphy_6996 1648255 - 1649070 + | amidohydrolase 2 TERM 1196 1649209 - 1649265 + T 75 -4.1 -4.79752 | overlap 1649202 GATGCGGTCGGCTCT GGTCAGACCCGTTTCTGCCGGTTGATT CTC AAGCATCCGGCTGGCTCGAACCTGACC TTTTCTGTTATTGAA Bphy_6997 1650327 - 1649362 - | LysR family transcriptional regulator TERM 1197 1651081 - 1651093 + G 86 -10.5 -4.21974 | CCCGGCGGAAATCGG GGCGG TGG CCGCC TTTCTTGCGTCGTCG Bphy_6998 1650434 - 1651168 + | short-chain dehydrogenase/reductase SDR Bphy_6999 1651182 - 1651949 + | short-chain dehydrogenase/reductase SDR TERM 1198 1652151 - 1652130 - g 81 -10.9 -4.12188 | gap 1, opp_overlap 1652140, overlap 1652131 CGATCATTCCCAAAA GCCT-GACGG AGG CCGTCAAGGC GGACATCATTTTTTT Bphy_7000 1651976 - 1652572 + | NADP oxidoreductase coenzyme F420-dependent Bphy_7001 1653882 - 1652758 - | hypothetical protein TERM 1199 1653459 - 1653430 - G 81 -9.3 -4.27584 | gap 1, overlap 1653456 1653457 ATCCGCAACGTAAAA GGCATTGCCCG-GG CCG CCGCGCACAATGCC CTGCGGGGCGAACGG TERM 1200 1654184 - 1654170 - g 71 -4.3 -4.46212 | overlap 1654183 TGGCTCAGCACAAAA TCTTC GCGGA GAAGA CCACACGCGCACGCA Bphy_7002 1654154 - 1654537 + | hypothetical protein Bphy_7003 1658206 - 1655036 - | acetoacetyl-CoA synthase TERM 1201 1658723 - 1658735 + G 86 -9.1 -4.56597 | overlap 1658729 CGCGTGGTCTCGACG CGCGA TGG TCGCG TTTTTAGCGGCGGCC Bphy_7004 1658673 - 1659923 + | GDSL family lipase Bphy_7005 1660951 - 1662522 + | AMP-dependent synthetase and ligase TERM 1202 1665393 - 1665433 + G 77 -12 -3.61398 | gap 3, opp_overlap 1665386 1665390 1665393 1665389 GAAGACATGAAGGCA GCGGC-A-CG-CTCGCGCG ACGCCG CGCGCGAGGCGATCGCCGC TTATTGCGGAGAAAG Bphy_7006 1662615 - 1665503 + | AMP-dependent synthetase and ligase Bphy_7007 1666357 - 1665863 - | hypothetical protein Bphy_7008 1667835 - 1666354 - | RND efflux system outer membrane lipoprotein TERM 1203 1667492 - 1667475 - G 100 -4.7 -5.86061 | opp_overlap 1667481 1667483, overlap 1667476 1667477 CTTGAGGAAAAAAAA CGCCCGC GCCT GCGCGCA GCAGGTATTCGCTTC Bphy_7009 1668898 - 1667813 - | secretion protein HlyD family protein Bphy_7010 1669593 - 1668895 - | ABC transporter related Bphy_7011 1670732 - 1669596 - | hypothetical protein Bphy_7012 1671271 - 1670801 - | UspA domain-containing protein TERM 1204 1670896 - 1670873 - G 79 -11.7 -3.92522 | CGCGAACCGGACAAA GCGCTCGGC CACGCT GCCGAGCAC GATGCGGCGCACGCC Bphy_7013 1673092 - 1671857 - | hypothetical protein Bphy_7014 1674174 - 1673089 - | ImpA domain-containing protein Bphy_7015 1675247 - 1674171 - | type VI secretion protein Bphy_7016 1675870 - 1675247 - | hypothetical protein TERM 1205 1675828 - 1675787 - G 71 -8 -4.08939 | gap 1, overlap 1675777 1675825 GAACAGCGACAGAAA GCCGCGTGTGACCGG-CCC GGTCG GAGTCCGGTCATACACAAC GCAGGTGCGTTCGGG Bphy_7017 1677233 - 1675944 - | DotU family type IV/VI secretion system protein Bphy_7018 1677508 - 1677230 - | PAAR repeat-containing protein Bphy_7019 1678570 - 1677605 - | hypothetical protein TERM 1206 1678128 - 1678108 - G 77 -4.6 -4.64676 | CGAGCGTGAAGAAAA GATCGTCC CACCT GGCCGACC GTATGACCCCATCGA Bphy_7020 1681142 - 1678572 - | hypothetical protein TERM 1207 1678777 - 1678766 - G 79 -5.8 -4.68908 | TCGATCCAAAATAAA TCGC AGCC GCGA TTCCAACGCCCGCTA TERM 1208 1679410 - 1679442 + g 72 -8.4 -4.07568 | gap 1, overlap 1679411 TGAATGCCAAGTCGG CGCAATGCCTGCGCG ACTT CGCGCTG-CATTGCA TTTTCGCCCAGGCCC Bphy_7021 1681993 - 1681139 - | hypothetical protein Bphy_7022 1684541 - 1682001 - | type VI secretion system Vgr family protein Bphy_7023 1686527 - 1684626 - | type VI secretion protein Bphy_7024 1688593 - 1686902 - | transposition protein, TnsD-like protein TERM 1209 1688583 - 1688573 - G 85 -4.6 -5.02074 | GGACGGGGCAAAAAA CAGC AAG GCCG GCTTATGCATTGCAG Bphy_7025 1689931 - 1688873 - | Tn7-like transposition protein C Bphy_7026 1692286 - 1690079 - | Tn7-like transposition protein B TERM 1210 1690306 - 1690330 + g 100 -19.3 -3.87815 | GACGACTGATGGGGA CGGGCGACGCG GGC TGCGTCGCCCG TTTGTCCGACTGGGC TERM 1211 1690807 - 1690847 + g 80 -13.9 -3.41602 | overlap 1690815 CAATCTCCTCCCGGA TCATGTCGGCCGTCAGCCG GTC CGGCCGACGGCTGTGATGG TTGTAATGGAGTACG TERM 1212 1690815 - 1690839 + g 84 -17.1 -2.88231 | overlap 1690807 TCCCGGATCATGTCG GCCGTCAGCCG GTC CGGCCGACGGC TGTGATGGTTGTAAT Bphy_7027 1693136 - 1692288 - | TnsA endonuclease Bphy_7028 1693497 - 1695254 + | AMP-dependent synthetase and ligase TERM 1213 1695702 - 1695715 + G 79 -2.4 -5.00616 | TGCAGGGCAGCCAGG GCAT CACCGC ATGC TTTTTTGGCGACGGC Bphy_7029 1695251 - 1696270 + | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit Bphy_7030 1696267 - 1697241 + | transketolase central region TERM 1214 1698337 - 1698365 + G 70 -5.1 -4.45738 | overlap 1698347 TGTCGGCCGACCACC GGGTGTCCGACGG CCA CCGTGGCGCGCTC TTTCTTCTTGAACTG Bphy_7031 1697271 - 1698419 + | dehydrogenase catalytic domain-containing protein Bphy_7032 1698416 - 1698667 + | hypothetical protein Bphy_7033 1699194 - 1698730 - | signal-transduction protein Bphy_7034 1699813 - 1699310 - | hypothetical protein Bphy_7035 1700501 - 1700049 - | CBS domain-containing protein Bphy_7036 1701554 - 1700580 - | hypothetical protein Bphy_7037 1702727 - 1701558 - | hypothetical protein Bphy_7038 1704074 - 1702752 - | erythromycin esterase Bphy_7039 1704876 - 1704169 - | phosphoribosyltransferase Bphy_7040 1705615 - 1704962 - | dienelactone hydrolase Bphy_7041 1706286 - 1705786 - | hypothetical protein TERM 1215 1707245 - 1707273 + G 81 -13.1 -3.58533 | overlap 1707272 CGATGCAGGCGGCGT GCGGCGCGCGGAA GAC TTTCGCGTGCGGC TTTCGAAGCTTCTCG Bphy_7042 1706703 - 1707668 + | ribose-phosphate pyrophosphokinase Bphy_7043 1708203 - 1707772 - | hypothetical protein Bphy_7044 1709473 - 1708421 - | CheB methylesterase TERM 1216 1710450 - 1710440 - g 100 -6.8 -5.55769 | GCTCATAACAAAAAA GCAG GAA CTGC TCGAGCGTCTATCGG Bphy_7046 1710255 - 1710506 + | hypothetical protein TERM 1217 1711439 - 1711394 - g 93 -6.9 -5.11613 | gap 2 ACATCATCGAAAAAA TGCAGG-CCGCG-AACGAAAG CGCGCT CATCCGTTACGCGGTCCGGCA CAAACTCTTCGACGA Bphy_7047 1710823 - 1711470 + | two component LuxR family transcriptional regulator Bphy_7048 1712859 - 1711897 - | LysR family transcriptional regulator Bphy_7049 1712995 - 1714059 + | extracellular solute-binding protein Bphy_7050 1714133 - 1715203 + | ABC transporter related Bphy_7051 1715190 - 1716062 + | binding-protein-dependent transport systems inner membrane component TERM 1218 1716504 - 1716559 + G 81 -16.9 -2.78384 | overlap 1716503 1716557 GCTGCCATATGCGCT GCGCCTCGCGTT-GTCGTCGGCCGTCG GGCT CGACCGC-GATGCCGAACGCGCGGCGC TGTCGTGCGGCGCGA TERM 1219 1716767 - 1716796 + G 81 -14.3 -3.45023 | ATCCCCTCGTTGCTT CCGTGTCGGCGGT GCTG ATCGTCGGCACGG TTCTGCTGATGGTGC Bphy_7052 1716067 - 1716864 + | binding-protein-dependent transport systems inner membrane component TERM 1220 1717720 - 1717736 + G 71 -10.8 -3.62096 | TGTCCGACATCGCGC GGCGCG GCGTG CGCGCC TTTCCGCTGCTGAAG Bphy_7053 1716861 - 1717997 + | FAD dependent oxidoreductase TERM 1221 1718097 - 1718139 + G 86 -14.7 -3.53012 | GCGCGTGCCGGGCGG CCGGTCGGTGGCGGCGGCG CTGCT CGCTGCCGGCATCGCGCGG TTTCGCGCGACACCC Bphy_7054 1718005 - 1718346 + | hypothetical protein TERM 1222 1718428 - 1718455 + G 84 -14.8 -3.38272 | gap 1 TCCCGCCGGTATGAG CGCGGCGACGCGC GCC GCGCG-CGCCGGG TTGTCCGTCGTGCTG Bphy_7055 1718336 - 1719766 + | BFD/(2Fe-2S)-binding domain-containing protein TERM 1223 1720262 - 1720286 + G 81 -7.8 -4.57569 | CACCGCCTTCCGGCT CGCCGCGC AGCGGCATG GTGCGGCG TTTTTCGAAGGCTCG TERM 1224 1720336 - 1720320 - g 76 -13.7 -3.06183 | opp_overlap 1720322, overlap 1720322 GTCAGCCGCATCGAA CAGCGCG GCA CGCGCTG GTTCGCGCGGACGCC Bphy_7056 1719759 - 1720940 + | FAD dependent oxidoreductase TERM 1225 1720949 - 1720966 + F 75 -10.5 -3.74693 | opp_overlap 1720946 GCACTGATCACACCC GCGCGCT GCCC GGCGCGC TTTCCTGCAATAAAC Bphy_7057 1721000 - 1721353 + | endoribonuclease L-PSP TERM 1226 1721874 - 1721846 - f 90 -16.8 -3.44146 | gap 1, opp_overlap 1721818 GGGCGTGAGAACGAA CGC-CGGCCGTTG TGCG CAACGGCCGAGCG CAACCCAAGCGGGAA Bphy_7058 1721922 - 1723196 + | hypothetical protein TERM 1227 1723255 - 1723295 + T 87 -15.4 -3.32844 | gap 1, overlap 1723256 CGGCGCCTCCGCCAT TGATCGGC-CGTGTCGGGC AGCA GCCCGACCCGAGCCGACCG TTCTCGGGTCGGCAA TERM 1228 1723256 - 1723294 + T 85 -16.7 -2.59564 | gap 1, overlap 1723255 GGCGCCTCCGCCATT GATCGGC-CGTGTCGGGC AGCA GCCCGACCCGAGCCGACC GTTCTCGGGTCGGCA Bphy_7060 1724379 - 1723537 - | IclR family transcriptional regulator TERM 1229 1724248 - 1724269 + g 72 -8.7 -4.08216 | overlap 1724235 1724234 CTTGCTGCCGTCGAA GGCGGTGAG CACT TTCATCGCC TTTTCGACGGACTGC Bphy_7061 1725988 - 1724447 - | AMP-dependent synthetase and ligase TERM 1230 1724829 - 1724805 - G 100 -3.4 -5.5112 | gap 1, overlap 1724806 CCGATGAAGAAAAAA TCGC-CGTCGC CGTC GCGTCGCGCGC GGTCGCCCGTGTGCA Bphy_7062 1727797 - 1726016 - | binding-protein-dependent transport systems inner membrane component Bphy_7063 1728868 - 1727807 - | spermidine/putrescine ABC transporter ATPase subunit TERM 1231 1727943 - 1727926 - G 74 -11.3 -3.64703 | opp_overlap 1727925 CGTCGCTCATCGAAA GCGACAC GCGT GTGTCGC TGCCGAAGAACACGA TERM 1232 1728124 - 1728079 - G 100 -18.9 -3.17723 | gap 1, opp_overlap 1728092 CGAGCGGCAATGGAA TGCGGCCGCCCGCGGCGAGCAG GAC CGGCTCGCCGGAGGC-GCCGCG CGCAGCGTCAAGTTC Bphy_7064 1729940 - 1728879 - | extracellular solute-binding protein TERM 1233 1728969 - 1729026 + g 89 -12.7 -3.99374 | gap 1, overlap 1728983 CTTCATGTCCTTGAT GTTGTCCGGGGCGGTCGGCA-GGAGCGT CGC GCGCTCCTTGCCGATGGTCTCGAAGGAC TTCTTGTTGGTCGGG TERM 1234 1728983 - 1729012 + g 74 -15.1 -2.62263 | gap 1, overlap 1728969 TGTTGTCCGGGGCGG TCGGCA-GGAGCGT CGC GCGCTCCTTGCCGA TGGTCTCGAAGGACT Bphy_7065 1730755 - 1729994 - | enoyl-CoA hydratase/isomerase TERM 1235 1730881 - 1730858 - R 83 -5.2 -5.01732 | AACTCGGCGAAAAAA GCGCGCCA GGCGAATG TGTCGCGC ATTCGAGGAAAGATC Bphy_7067 1733159 - 1731513 - | phospholipase C TERM 1236 1732241 - 1732216 - G 77 -11.9 -3.6682 | gap 1 GCGTAGCGACGGAAA CTGCCGC-CGAC ATC GTCATGCGGCAG GGTGAGTGACGTGAT TERM 1237 1733298 - 1733286 - H 72 -9.1 -3.86015 | GATGCTCTTCATAAA CCCGT CAA ACGGG AAACGGAGAAGTCTC TERM 1238 1733409 - 1733458 + G 87 -18.5 -2.71364 | gap 1 CTGGGGGCATGGTCG CGGCGGCGGCGATG-GCGGCGCGA TCG TCGGGGCGCTCATCGGCGGCGCCG TGCTTGGCGCGCTCG Bphy_7068 1733314 - 1733628 + | hypothetical protein Bphy_7069 1734391 - 1733681 - | short-chain dehydrogenase/reductase SDR Bphy_7070 1734758 - 1734396 - | hypothetical protein Bphy_7071 1735576 - 1734821 - | hypothetical protein TERM 1239 1735516 - 1735458 - G 75 -7.3 -4.25056 | gap 1 TAGTCGATGAAGAAA TGCTTCG-CACGCTCGACCGCGACGGGC GGCA GCGCGTCACATTCGAGCCCGGCGCAGAA CCGGGCGAATGTCTG Bphy_7072 1736491 - 1735721 - | ferredoxin--NADP(+) reductase TERM 1240 1735762 - 1735790 + g 74 -5.1 -4.56597 | opp_overlap 1735734, overlap 1735786 CATAATGTCCAGGCG CGCTGTTCTTGCC TTC GACGAGACCCGCG TTTTTCAGCAACACG TERM 1241 1736707 - 1736686 - R 79 -12.9 -3.21747 | TGATCCCAGCATCAA GGCCGCGGC TGTC GCCGCGCCC GCATTCGGCTTCACG Bphy_7073 1737670 - 1736768 - | hypothetical protein TERM 1242 1737317 - 1737307 - G 72 -8.2 -3.99347 | AAATCAGCGAAAGAA GCCG AAA CGGC GTCAAGAGCCCCCAG TERM 1243 1737900 - 1737890 - R 79 -6.8 -4.70515 | opp_overlap 1737889 GAGACGCAAAAGAAA GCGA AGG TCGC AGCTTTTCTTAATTG Bphy_7074 1739603 - 1738293 - | major facilitator transporter TERM 1244 1738537 - 1738518 - G 71 -10.6 -3.67564 | AACGATCGAGCCAAA GCCGCGGC CGCC GCCGAGGC AGAACCCCTGGCCGC TERM 1245 1738677 - 1738638 - G 74 -2.6 -4.72272 | gap 1, overlap 1738649 CGCGCCCAGGAAAAA GCT-GAGCAGAACGGTCAC GCT GGGTCCGATCGGCGCGAGC AGATAGATGGCGACG TERM 1246 1738980 - 1738962 - G 79 -10.2 -4.11371 | opp_overlap 1738969 GAAGATCGCCCAAAA CGGCGTTG CCG CTACGCCG CTGCGGCTCGCGACC Bphy_7075 1740623 - 1740048 - | hemerythrin HHE cation binding domain-containing protein Bphy_7076 1740868 - 1740671 - | hypothetical protein TERM 1247 1741078 - 1741037 - R 75 -12.2 -3.28712 | gap 1 CGCCCGCTTCCAGAA GCTCTCGCGCCGGGCCGGC GGGAG GCCGGTCCGG-ACGAATGC AATCGTCACTTATCG TERM 1248 1741123 - 1741142 + r 88 -10 -4.49838 | gap 1 TTCGTGGCGCCTTTC GCGGC-AGC ATC GCTTGCCGC TTTATCTTTCTTCTT Bphy_7077 1741334 - 1741101 - | hypothetical protein Bphy_7078 1742462 - 1741491 - | hypothetical protein TERM 1249 1741735 - 1741722 - G 71 -3.8 -4.53303 | CAGTGCCACAGAAAA GCTC GTGTCG GAGC CAAGGAAATACAACG Bphy_7079 1743695 - 1742481 - | putative (ceramide) glucosyltransferase TERM 1250 1743732 - 1743718 - R 75 -8.5 -4.05788 | opp_overlap 1743723 1743725 CCTCGTCAAATGAAA CGCCG TTCGG CGGCG CCGCGGTTGGTAGTT Bphy_7080 1744067 - 1743708 - | hypothetical protein TERM 1251 1744470 - 1744487 + G 86 -12.7 -3.85817 | opp_overlap 1744465 1744461 GAGCAAGGCACGGCG CGCACGC CACG GCGTGCG TTTCTGCGAACGGCT TERM 1252 1745415 - 1745427 + G 70 -5.5 -4.30844 | overlap 1745412 1745416 GCCAATCCTGATGTC TGGTC GAA GACCG TTTTCCTGCTGAACT TERM 1253 1746440 - 1746399 - g 80 -13.8 -3.37071 | AAAGTCGATGGACAA CCCGCATTCC-TGCGGCGCC TGGC GG-GCCGCATGGAAAACGGG CACCAACTCGTCAGC Bphy_7081 1744413 - 1746473 + | phospholipase C, phosphocholine-specific Bphy_7082 1747177 - 1746518 - | flagellar transcriptional activator FlhC TERM 1254 1746636 - 1746665 + g 73 -9.9 -3.82084 | gap 1, opp_overlap 1746631 ACTTCGACAAGCTGC GGCTGCGCGTCGCG CTT CGCTGCG-GCGGCC TTCTTCGTCTTGCCG Bphy_7083 1747512 - 1747192 - | flagellar transcriptional activator Bphy_7085 1749339 - 1748452 - | LysR family transcriptional regulator TERM 1255 1749769 - 1749786 + G 78 -7.7 -4.37092 | gap 1 CTCGCCGACGCTGAG CTGGCTCG TGG CG-GCCAG TTTTCTCACGGGCCT TERM 1256 1750305 - 1750325 + G 78 -3.2 -4.92783 | overlap 1750307 GCAATCCACGGATAG TCGTGCTG GCAAG CAGCGCCA TTTTTGTGCTGGCTT Bphy_7086 1749485 - 1750657 + | major facilitator transporter Bphy_7087 1751044 - 1750673 - | putative transmembrane protein Bphy_7088 1751204 - 1752148 + | LysR family transcriptional regulator TERM 1257 1752175 - 1752207 + T 91 -12.7 -4.0031 | opp_overlap 1752175 TCGCCGCATAAAAAA CGGCAGCGCATGG ACTTTCA TCATGCGCCGCCG TTCTTTCGTGAGACT TERM 1258 1752207 - 1752175 - T 100 -14.2 -5.24129 | opp_overlap 1752175 TCGCCGCATAAAAAA CGGCAGCGCATG GACTTTCAT CATGCGCCGCCG TTCTTTCGTGAGACT Bphy_7089 1753220 - 1752231 - | 2-nitropropane dioxygenase NPD TERM 1259 1752523 - 1752544 + g 89 -10.2 -4.58466 | GTCCGGTATTCGGTA TCGTCGAC AGTGGC GTCGACGA TTTTCTGCTTGTAGA Bphy_7090 1753844 - 1753224 - | cytochrome B561 TERM 1260 1753642 - 1753631 - G 70 -5.8 -4.24948 | CGAGCAGATTCAAAA CGCT CGCT AGCG CAGTGCCGGGCGAGA Bphy_7091 1755545 - 1753872 - | SSS family solute/sodium (Na+) symporter Bphy_7092 1755856 - 1755542 - | hypothetical protein Bphy_7093 1756106 - 1757128 + | luciferase family protein TERM 1261 1757152 - 1757177 + F 71 -10.4 -3.63515 | gap 1 TCGTGTAGGCATGCA GCCGCATCCGG CCAGT CCGGG-GCGGC TTGTTGCGCGTGGGC Bphy_7094 1757567 - 1758277 + | short-chain dehydrogenase/reductase SDR TERM 1262 1758316 - 1758282 - f 82 -10.7 -4.24342 | gap 1, overlap 1758285 CTGGCCACTAAGAAA GCATGACACGGCGCCG GCAA CGGCGCC-TGTCCCAC ACACCACTTCGGAGA Bphy_7095 1758337 - 1758573 + | 4-oxalocrotonate tautomerase Bphy_7096 1759314 - 1758646 - | MOSC domain-containing protein Bphy_7097 1760443 - 1759343 - | 2-nitropropane dioxygenase NPD TERM 1263 1760272 - 1760327 + g 88 -17.4 -3.14132 | opp_overlap 1760312, overlap 1760277 TATCGCGGATAGTCT TGCGCGCGGCCTCGGCTTTCATCGCG CCCA CGCCAAGCGAGCCGAGACCGCCCGCG TTGGTGACGGCGGCC Bphy_7098 1761388 - 1760639 - | creatininase TERM 1264 1761699 - 1761750 + H 74 -13.6 -2.52543 | GGACTTCGGACCTGC TATTCTCTGCGGACACGCGGCGCA GCCC TGCGCCGCGACTTCGCAGCGCGTG TGCGTTGCACACCAT TERM 1265 1761879 - 1761918 + G 74 -13.4 -3.17901 | gap 1 AGAGCTTCACGATGG CAGCAG-CGGCTGCGAGCG TGA CGCCCGCGGCCGTCAGCCG TTCGGTTGCGCGTCT TERM 1266 1762120 - 1762077 - g 73 -13.9 -2.78816 | gap 1, opp_overlap 1762072 CGACGGGCCAGCAGA GCACGCCGTCGGGCGTGCTG CGCAT CAGCATGC-CGACGCCGTAC AGCCACTATCGTGTG TERM 1267 1762480 - 1762529 + G 89 -18.5 -3.02829 | gap 1, overlap 1762521 CGGTGGGTATGGCAC GTCCGGCGACGTGCTG-GCGGGCG CGA CGCTCGCGCGACACGGCGCTGGGC TGTTCCAGACCTATC Bphy_7099 1761797 - 1762708 + | LysR family transcriptional regulator Bphy_7100 1762772 - 1763689 + | LysR family transcriptional regulator Bphy_7101 1763809 - 1764108 + | hypothetical protein Bphy_7102 1764542 - 1764120 - | hypothetical protein TERM 1268 1764695 - 1764742 + r 73 -3.3 -4.72272 | gap 3, opp_overlap 1764674, overlap 1764697 1764698 CACGTCGCTGTGATC GCG-CCGGCGT-GCGCGACGCTCG TCG CGTGC-TCGCGCAAGGCCAGTCTC TTTTTGCTCGCGCCG Bphy_7103 1765297 - 1764875 - | rubredoxin-type Fe(Cys)4 protein TERM 1269 1765148 - 1765129 - G 70 -13.6 -2.64933 | overlap 1765133 GATCCAGCGACACGA CGAACGGC GCGG GCCGTTCG GCGGCTGACGTGTCG TERM 1270 1765412 - 1765375 - H 78 -3.9 -4.87665 | gap 1, overlap 1765377 1765379 CTGCACTCAGAAAAA GTGACGCAGCAGCGC-GC TGC ACAGCGCGGCGGCGATAC CGACCAGACCGAGGG Bphy_7104 1765637 - 1766131 + | hypothetical protein Bphy_7105 1767256 - 1766204 - | hypothetical protein Bphy_7106 1767360 - 1768970 + | Alpha,alpha-trehalase Bphy_7107 1769349 - 1769588 + | hypothetical protein TERM 1271 1769692 - 1769717 + F 100 -9.7 -5.00616 | gap 1, overlap 1769693 TCATTGATCCCCTGT CGTGCCGCCAGA GCA TC-GGCGGCACC TTTTTTCGCGCGCCA TERM 1272 1769693 - 1769716 + F 81 -13.2 -3.60048 | gap 1, overlap 1769692 CATTGATCCCCTGTC GTGCCGCCAGA GCA TC-GGCGGCAC CTTTTTTCGCGCGCC Bphy_7108 1769780 - 1770256 + | hypothetical protein Bphy_7109 1771036 - 1770314 - | phospholipid/glycerol acyltransferase TERM 1273 1771168 - 1771151 - R 100 -14.1 -5.42198 | opp_overlap 1771147 1771164 CGCCAAAAAAGAAAA CGCCGGC CAAA GCCGGCG TCGATGCTGTAGTTT Bphy_7110 1773521 - 1771437 - | diguanylate cyclase/phosphodiesterase TERM 1274 1772495 - 1772514 + g 72 -11.4 -3.53012 | opp_overlap 1772484, overlap 1772489 CGAACTCGTCGCCGC CGACGCGC GCCA GCGTGTCG TTTCCGCGCACGGCC TERM 1275 1773730 - 1773741 + H 76 -7.2 -4.42513 | GTATTCGGTGTAGTC CGCG ATCT CGCG TTTCTATTTCTGATT Bphy_7111 1774066 - 1774539 + | hypothetical protein TERM 1276 1775281 - 1775317 + F 90 -16 -3.53012 | overlap 1775316 TCGAGCTTCGTGAAG CCCAT-GCTCGCGCCGCG CAG CGCGGCGT-AGCGATGGG TTTCGAGAAACGCAG Bphy_7113 1776052 - 1777095 + | integrase family protein TERM 1277 1777112 - 1777140 + T 93 -12.5 -4.1822 | opp_overlap 1777118, overlap 1777118 CGACTCGGGACGAGA AAAAAACCCCGCG TAA TGCGGGGTTTTTC TTTCTTCGGCTGCGC TERM 1278 1777118 - 1777134 + T 100 -11.5 -5.47159 | opp_overlap 1777118, overlap 1777112 GGGACGAGAAAAAAA CCCCGCG TAA TGCGGGG TTTTTCTTTCTTCGG TERM 1279 1777134 - 1777118 - T 100 -10.8 -5.67063 | opp_overlap 1777118 1777112 GGGACGAGAAAAAAA CCCCGC GTAAT GCGGGG TTTTTCTTTCTTCGG Bphy_7114 1777495 - 1777196 - | hypothetical protein Bphy_7115 1778036 - 1777686 - | regulatory protein MerR Bphy_7116 1778288 - 1778055 - | hypothetical protein TERM 1280 1778309 - 1778343 + r 71 -10.1 -3.57144 | gap 1, opp_overlap 1778313 1778318 GCTCCCTTGGCAGTT CAAAGCACA-CAGCGT CTGT GCGCTGCTGTGCTTCG TTTAACCCTAGACCG TERM 1281 1778331 - 1778313 - R 74 -11 -3.59979 | opp_overlap 1778309, overlap 1778318 CCTTGGCAGTTCAAA GCACACAG CGT CTGTGCGC TGCTGTGCTTCGTTT Bphy_7117 1778625 - 1778362 - | hypothetical protein Bphy_7118 1780050 - 1778731 - | hypothetical protein Bphy_7119 1780590 - 1780348 - | hypothetical protein Bphy_7120 1780970 - 1780587 - | hypothetical protein TERM 1282 1780811 - 1780790 - G 79 -4.4 -4.90869 | gap 1 ACCAGTAATGAAAAA CGCCGTCGA TCTTT TCG-CGACG CACTGCGCCCTCATA TERM 1283 1781006 - 1781026 + r 76 -12.5 -3.03338 | overlap 1780995 ATTCGGCGGCGTCGG GCGGCGGTG CTT CGCCGTCGC TCTTCGGCGGGTTCT Bphy_7121 1781516 - 1780989 - | hypothetical protein Bphy_7122 1781908 - 1781612 - | hypothetical protein Bphy_7123 1782973 - 1781918 - | RecT protein Bphy_7124 1783291 - 1783013 - | hypothetical protein Bphy_7125 1784131 - 1783325 - | hypothetical protein Bphy_7126 1784484 - 1784284 - | hypothetical protein TERM 1284 1784894 - 1784882 - g 81 -4.7 -4.89852 | opp_overlap 1784887 CGAGAGGCAGAAAAA CCGCG CGT CGCCG AAATGGAGCCGTAAT Bphy_7127 1784624 - 1784908 + | hypothetical protein TERM 1285 1785586 - 1785558 - g 95 -7.9 -5.0538 | overlap 1785560 1785584 CGTGAGCGGAAAAAA GCGGCGCGCGGCG TGT CGCCGAGCAACCC GACCGTGATCGATCT Bphy_7128 1784991 - 1785893 + | hypothetical protein Bphy_7129 1785890 - 1786387 + | hypothetical protein Bphy_7130 1786384 - 1786926 + | endodeoxyribonuclease RusA TERM 1286 1787332 - 1787363 + G 70 -11.7 -3.34013 | overlap 1787333 TGCACTTCGCGTATC TGATTCAGGCGTA TCCGGC TGCGCCTGAATCG TTGCTTGCGCGCGTC TERM 1287 1787573 - 1787584 + G 84 -7.2 -4.72201 | overlap 1787571 CTTCACGGACGCGGG CGGC GACC GCCG TTATTTTTTCTCGCG Bphy_7131 1787283 - 1787885 + | GP66 Bphy_7132 1788725 - 1787946 - | hypothetical protein Bphy_7133 1788988 - 1790667 + | hypothetical protein TERM 1288 1790688 - 1790705 + F 100 -14.1 -4.88228 | opp_overlap 1790688 CTGCAGCCAAAAAAA GGCCCGC TTTC GCGGGCC TTTTTCGTCTTCGAT TERM 1289 1790705 - 1790688 - f 100 -14.1 -5.47218 | opp_overlap 1790688 CTGCAGCCAAAAAAA GGCCCGC TTTC GCGGGCC TTTTTCGTCTTCGAT TERM 1290 1791130 - 1791161 + F 78 -14.6 -2.64107 | overlap 1791126 GAGTTAATTTGCTGC TTCGTTAGCAGTTC ATCA GAACTGCTAACGAC TAGTCTAGGAGTTTG Bphy_7134 1791262 - 1791651 + | HNH endonuclease TERM 1291 1791916 - 1791929 + F 87 -3.7 -5.40072 | CCGGGCCCCGTGATC GTGCG CCTG CGCTC TTTTTTTCCGACGCG Bphy_7135 1791968 - 1792519 + | nuclease TERM 1292 1792641 - 1792618 - g 81 -3.2 -5.08601 | gap 1, overlap 1792620 1792621 CGACGTTAAGAAAAA GAGCACGCA TCACGTG TGCGT-CTC CGCTGATGTCGAGTC TERM 1293 1793519 - 1793503 - g 75 -3.6 -4.72272 | TCTCGCCATGAAAAA GTACCC GCAAT GGGTGC TCACCGATGTATCAC Bphy_7136 1792523 - 1793638 + | hypothetical protein TERM 1294 1793912 - 1793872 - g 70 -14 -2.63236 | overlap 1793852 1793871 1793906 CAACTCAAGAGCAAC GCCGACGCGCTGGCCG CTGCTGTGT CGGCCAACACGCCAGC CGCCCCGCTCGCAAG Bphy_7137 1793635 - 1793955 + | hypothetical protein Bphy_7138 1793958 - 1794416 + | P27 family phage terminase small subunit TERM 1295 1794438 - 1794409 - f 83 -7.9 -4.63486 | gap 1 ATTTTGTGAAGAAAA GGCGCTGATAT-GG CGT CCGACATCATCGCC GTGGTGAGTCAGTTC Bphy_7139 1794418 - 1794633 + | zinc finger CHC2-family protein TERM 1296 1794954 - 1794927 - g 70 -14.2 -2.52464 | opp_overlap 1794923 1794923 1794935, overlap 1794935 TTCGGCTGGAAGCGA CGCAAAAACGGC ATGC GCCGCTTTCGCG AGCTTTACGCGGAGA TERM 1297 1794946 - 1794935 - g 82 -7.2 -4.68424 | opp_overlap 1794923 1794923 1794935, overlap 1794927 GAAGCGACGCAAAAA CGGC ATGC GCCG CTTTCGCGAGCTTTA TERM 1298 1795870 - 1795852 - g 78 -3 -4.90381 | opp_overlap 1795860 TCGAAGAGAACAAAA CGAATCAG GCG CTGTATCG CAAGTGGGTCATACA Bphy_7140 1794636 - 1796330 + | terminase Bphy_7141 1796327 - 1796485 + | hypothetical protein TERM 1299 1797274 - 1797262 - gf 80 -4.7 -4.75776 | opp_overlap 1797262 AATTGAAGTGAAAAA CAGCG ATG CGCAG TACCTTGAGACGCGC TERM 1300 1797914 - 1797941 + GF 79 -14 -3.08464 | GGCGTCAGCGACGAC GCCGCGCGCGAC TACT GCCGCGCGCAGC TTGAATACGTCATCG Bphy_7142 1796489 - 1798063 + | HK97 family phage portal protein TERM 1301 1798053 - 1798064 + GF 70 -4.4 -4.41348 | ATGAACCGCTCACTG CTCA TATC TGAG TTTCTTTCCACGCCG Bphy_7143 1798038 - 1798973 + | peptidase S49 TERM 1302 1799106 - 1799082 - g 100 -9.9 -4.92757 | overlap 1799083 1799098 TCATGAACAAGAAAA TCCGTGCGCTG CAA CAGCGCAAGGC TGAAAAGGTCGCGGC TERM 1303 1799105 - 1799083 - g 78 -13.4 -3.5457 | overlap 1799082 1799098 CATGAACAAGAAAAT CCGTGCGCTG CAA CAGCGCAAGG CTGAAAAGGTCGCGG Bphy_7144 1799069 - 1800373 + | HK97 family phage major capsid protein Bphy_7145 1800392 - 1800883 + | hypothetical protein TERM 1304 1800905 - 1800925 + F 100 -11.8 -5.74122 | opp_overlap 1800904 CACGCACTGAGAGAG CCCGCGCT CAAAA GGCGCGGG TTTTTTTATGTCCTC TERM 1305 1801415 - 1801433 + G 70 -7.3 -3.98291 | opp_overlap 1801415 TTCGCCCATCAAAAA CGCGGTG GCAGG CTCCGCG TTCTTTACCGTTGTT TERM 1306 1801433 - 1801415 - g 87 -7.3 -4.72272 | opp_overlap 1801415 TTCGCCCATCAAAAA CGCGGTG GCAGG CTCCGCG TTCTTTACCGTTGTT Bphy_7146 1800933 - 1801790 + | hypothetical protein TERM 1307 1802004 - 1802054 + G 72 -6.7 -4.24204 | gap 1 GTTATGACGACATCT GGAGCGACCCGAAAACGGTCGCGA CGTA TCGC-ATCGTGTACGGCACGCGCC TTTTCAATGTGAATG Bphy_7147 1801787 - 1802140 + | phage head-tail adaptor TERM 1308 1802283 - 1802270 - g 70 -2.3 -4.61231 | overlap 1802271 1802272 CGAGACGGCGAAAAA CCTCG CGCC CGAGC TTGAGAAAGAAGACA Bphy_7148 1802133 - 1802729 + | HK97 family phage protein Bphy_7149 1802726 - 1803076 + | hypothetical protein TERM 1309 1803099 - 1803114 + F 100 -11.8 -5.80364 | ACCCGCCCGTCACCG GCCCGC CCAA GCGGGC TTTTTTTATTGGAGT Bphy_7150 1803137 - 1803772 + | hypothetical protein Bphy_7151 1803783 - 1804181 + | hypothetical protein Bphy_7152 1804295 - 1804483 + | hypothetical protein TERM 1310 1804839 - 1804885 + G 83 -17.3 -2.59748 | gap 1, overlap 1804836 GGGCAAAATCATGTC GCCCGTCGGGC-TCGCGGTTGG CGCG CTCACTGCGACGCTCGGCGGGC TCGCTTATGCCGCTG TERM 1311 1805430 - 1805478 + G 85 -16.9 -3.05384 | opp_overlap 1805429 1805428 GTTTCTCGGCAAATC CGAATCGATCGATGAGCGGAT AGAGGAA ATTCGCTCATCGCTCGAATCG TTGCCTAAGACCGGC TERM 1312 1805790 - 1805817 + G 80 -14 -3.42354 | opp_overlap 1805788 1805806 CATCAAAAAGTCATT CGAGCACGGCGC TAAA GCGCCGAGCACG TTCTCGGTTGACATG TERM 1313 1806171 - 1806137 - g 71 -9.2 -3.76224 | TGCGCAGCGATGAAA TGCTCGCGAACGCT GACGACG AGCGCGCGCGCGCA ACGGAGAAGTACCGC Bphy_7153 1804483 - 1807224 + | prophage tail length tape measure Bphy_7154 1807229 - 1807852 + | hypothetical protein Bphy_7155 1807861 - 1808052 + | hypothetical protein Bphy_7156 1808059 - 1809147 + | hypothetical protein Bphy_7157 1809151 - 1809564 + | NlpC/P60 family phage cell wall peptidase TERM 1314 1811177 - 1811197 + G 85 -5.3 -5.09895 | opp_overlap 1811156, overlap 1811179 1811179 GACGCGAAACAATCT TGCGCCGCT CAT GGCGTCGTA TTTTTTCGATGCGTG Bphy_7158 1809564 - 1812734 + | hypothetical protein Bphy_7159 1812737 - 1813447 + | hypothetical protein Bphy_7160 1813458 - 1814507 + | hypothetical protein Bphy_7161 1814510 - 1816003 + | hypothetical protein TERM 1315 1816420 - 1816384 - g 73 -9.4 -3.93369 | gap 1, opp_overlap 1816391, overlap 1816373 CGAAGGCCAAGGAAA GCGGCCAGCGC-GCGAT GCTC ATCGCCGCACTGTCTGC GCTCGTGTCGATCTT Bphy_7162 1816014 - 1816472 + | hypothetical protein Bphy_7163 1816482 - 1817003 + | hypothetical protein TERM 1316 1817506 - 1817542 + G 93 -3.6 -5.36441 | gap 1, overlap 1817507 TCGTGGGGACGGTCA TCGGCTACGTG-AGCGC GAAT GCGCAGCAGGTGGTCGG TTTTTTCTATGGCAG TERM 1317 1817605 - 1817574 - g 76 -14.4 -3.08173 | overlap 1817579 AGCAAGGGCAGCGAA GCGAAGACCGACGC GATG GCGGCGGCCTTCAC ACAAACGTTCGGTGT Bphy_7164 1817007 - 1817645 + | hypothetical protein TERM 1318 1817990 - 1817968 - f 100 -12 -5.40625 | ATACTATATAAAAAA GACGCGCC ACGGTCG GGCGCGTC GTAAACACATGCGCG Bphy_7165 1818307 - 1818558 + | hypothetical protein TERM 1319 1818688 - 1818668 - T 75 -5.4 -4.58663 | opp_overlap 1818669, overlap 1818669 AGCATGCTTGAAAAA TTTCGTGG CCGGT CCACGAAT TCTGACGGTTCCCCG TERM 1320 1818845 - 1818820 - T 100 -13.9 -5.40072 | TTGGCGTTAAAAAAA GCCGGCCGCCC TCGC AGGCGCCCGGC CCGTAAGGCTCTGAC TERM 1321 1819178 - 1819199 + T 73 -2.9 -4.86133 | overlap 1819179 CGACGCTCGCCCGCA TGTCCGTTT CTCA GGACGGACC TTTTTCCTGTCTGTC Bphy_7166 1819469 - 1819188 - | hypothetical protein TERM 1322 1819541 - 1819551 + H 72 -4.6 -4.6038 | opp_overlap 1819540 1819541, overlap 1819535 TATGCTCCCGGAAAG TGCG GCG CGCG TTTTACTTTCGTGTG TERM 1323 1819948 - 1819921 - H 100 -12 -5.06414 | gap 1 CGGCGCTAACAAAAA GGCCAGGCGTCCT GAT AAG-CGCCCGGCC TGTCGAACTGCTCTG Bphy_7167 1820193 - 1820618 + | hypothetical protein Bphy_7168 1821383 - 1820622 - | putative exported alkaline phosphatase Bphy_7169 1822231 - 1821530 - | short-chain dehydrogenase/reductase SDR TERM 1324 1823034 - 1823070 + G 70 -13.8 -2.5092 | gap 2, overlap 1823033 GCTTGTATGGCACGC CGCGC-TGCG-TCGCCTG ATC CACGCGATCGCACGCGCG CTTCATGGGCTGTTG Bphy_7170 1822741 - 1823265 + | hypothetical protein Bphy_7171 1824227 - 1823220 - | AraC family transcriptional regulator TERM 1325 1823481 - 1823460 - G 72 -11.5 -3.54741 | TAGCAGGTCGGTAAA GCGCTGCGC GAAA GCGGAGCGC GACAGGCCGACCTTG TERM 1326 1823853 - 1823832 - G 72 -6.5 -4.20516 | gap 1, overlap 1823844 GTCGCATGCAAGAAA GCCG-CACAG AAT CCGCGTCGGC GCACCGCCTCCACCG TERM 1327 1824146 - 1824120 - G 74 -13 -3.29263 | opp_overlap 1824110, overlap 1824108 1824121 ATACGCCGTGCACAA CGCCTGATCGGC GTG ACCGATCAGGCT CCAGGGCGCTGTCAG TERM 1328 1824145 - 1824121 - G 81 -16.5 -2.57344 | opp_overlap 1824110, overlap 1824108 1824120 TACGCCGTGCACAAC GCCTGATCGGC GTG ACCGATCAGGC TCCAGGGCGCTGTCA Bphy_7172 1826072 - 1824411 - | AMP-dependent synthetase and ligase TERM 1329 1826186 - 1826143 - R 77 -11.9 -3.49482 | gap 2, opp_overlap 1826151, overlap 1826141 1826151 CGAGAGTACGAAACA TGCACGAACCCTGCCCCCCCA GGTG TGAGGGGG-AGGGTTC-TGGA GAATAGAGCCCGTGC TERM 1330 1826151 - 1826179 + r 71 -11 -3.30124 | gap 1, opp_overlap 1826143 1826141 1826151 CGAAACATGCACGAA CCCTGCCCCCCCA GGTG TGAGGGGG-AGGG TTCTGGAGAATAGAG TERM 1331 1826179 - 1826151 - R 79 -13.2 -3.23638 | gap 1, opp_overlap 1826151, overlap 1826143 1826141 CGAAACATGCACGAA CCCTGCCCCCCCA GGTG TGAGGGGG-AGGG TTCTGGAGAATAGAG Bphy_7173 1829055 - 1826269 - | ATP-dependent transcription regulator LuxR TERM 1332 1828075 - 1828018 - G 85 -17 -3.14132 | gap 3, overlap 1827963 TTCGCTCGCGATGAA GACGGGCG-TGTC-GCGCACCAGCCGCGC GAG GCGCT-CGGGCGCGCCGACGTCGCCCGTC AACGCCTCGCACAGT TERM 1333 1829059 - 1829079 + H 84 -12.5 -3.65351 | overlap 1829076 GGGGCCGCGCACCGC CCCCCCTCG CGG CGAGTGGGG TTTCGATGCCCCTCC Bphy_7174 1829210 - 1830133 + | hypothetical protein Bphy_7175 1830146 - 1831129 + | alcohol dehydrogenase TERM 1334 1831450 - 1831415 - g 70 -6 -4.26076 | gap 1, opp_overlap 1831435 1831436, overlap 1831416 CGACCGCTATGAAAA CGCATGGCACACCGACG CCA CGT-GGCGCGCCGCGCC GCCTTTCGGCTGCGT TERM 1335 1831576 - 1831558 - g 72 -13.2 -3.07043 | CCGAGCACGTCAAGA CGCAGATC GCC GATCTGCG CGCACGCCACAGTAT TERM 1336 1831638 - 1831628 - g 72 -8.2 -4.18494 | GATGCCGATCGAAAA GCGC CAC GCGC TGAAAGCGCAGTATC Bphy_7176 1831131 - 1831979 + | taurine dioxygenase Bphy_7177 1832076 - 1833128 + | hypothetical protein TERM 1337 1833268 - 1833237 - f 85 -15.1 -3.06696 | gap 1 TGCGGCTTGAAGAGA CGGGC-CCGCGCGC GTCGA GCGCGCGGAGCACG CAACGCCCGCAAACG Bphy_7178 1833296 - 1834621 + | major facilitator transporter Bphy_7179 1834642 - 1835226 + | hypothetical protein Bphy_7180 1835244 - 1835588 + | Rieske (2Fe-2S) domain-containing protein Bphy_7181 1835659 - 1836261 + | phosphoesterase PA-phosphatase related TERM 1338 1836327 - 1836289 - T 82 -9 -4.51812 | gap 3, opp_overlap 1836289 1836311 GCCCAGAAGAACAAA CCGCGAC-TGCGTTCCGTC GAAT GACAG--CGCATGTCGCGG TCTTTGCGACCCACC Bphy_7182 1836697 - 1836377 - | hypothetical protein Bphy_7183 1837729 - 1836878 - | putative transposase A-like protein Bphy_7184 1837858 - 1838202 + | hypothetical protein TERM 1339 1838440 - 1838454 + G 72 -11.4 -3.53444 | GCGTCGCGGCCATGA CGGGCA TCC TGCCCG TTTCGCACGCGGTGC Bphy_7185 1838328 - 1839059 + | 17 kDa surface antigen TERM 1340 1839094 - 1839074 - f 100 -15.4 -3.84514 | opp_overlap 1839074 ATGGCAAGCATGAAA CCGCCCGC ATGTG GCGGGCGG TTACTACCCGTTACA TERM 1341 1839074 - 1839094 + F 85 -15.4 -3.16742 | opp_overlap 1839074 ATGGCAAGCATGAAA CCGCCCGC ATGTG GCGGGCGG TTACTACCCGTTACA Bphy_7186 1839125 - 1839493 + | hypothetical protein TERM 1342 1839758 - 1839790 + G 72 -8.4 -4.06419 | gap 1, opp_overlap 1839761, overlap 1839761 GAACGCAGGTTGAAG CTATTGGCGGACGCT ACGG GGCG-CCGCCAGTCG TTCTTTCTGCAGCAG TERM 1343 1839827 - 1839817 - g 72 -8.2 -4.1899 | GCAGTTGATCGAAAA CGGC ATG GCCG CGATGGAAGAAGCAT Bphy_7187 1839683 - 1839958 + | hypothetical protein Bphy_7189 1840429 - 1842417 + | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 1344 1842682 - 1842719 + F 73 -11.9 -3.16564 | GACCTCGGGTTGCAG GCCGCCGTTGCGCGTTG TCGG CAGCGCGCAACGGCACA TTGATCCCATCCACG Bphy_7190 1842747 - 1843028 + | coenzyme PQQ synthesis D Bphy_7191 1843347 - 1843108 - | hypothetical protein TERM 1345 1843390 - 1843402 + H 72 -5.5 -4.41137 | opp_overlap 1843386 1843384 1843382 1843375, overlap 1843386 1843382 1843375 CGACGAAGAGACATG CGCGT CGC ACGTG TTTCTTGTCGTTATC Bphy_7192 1843745 - 1845472 + | methanol/ethanol family PQQ-dependent dehydrogenase TERM 1346 1845524 - 1845484 - f 86 -14.8 -3.29511 | gap 2, opp_overlap 1845483 1845482 1845522 GTGATCTTTGCAGAA GCGGGACGCACAGCGAATGC ATC GCAT-CGC-GCGTGTCCCGC CCTTTCCGGACGTCT Bphy_7193 1845544 - 1846773 + | cytochrome c class I TERM 1347 1846799 - 1846847 + F 73 -11.9 -3.16564 | gap 3, opp_overlap 1846801, overlap 1846802 ATCGCTTATGTCGAA TATGTGGGC-CGGC-CGTGACGAT TTCC GTCGACACGCGCCGCGCCCAC-TA TTGATGCAATGCGCG TERM 1348 1846846 - 1846801 - f 73 -11.9 -3.04144 | gap 2, opp_overlap 1846799 1846802 CGCTTATGTCGAATA TGTGGGC-CGGC-CGTGACGA TTTCCG TCGACACGCGCCGCGCCCACT ATTGATGCAATGCGC TERM 1349 1846802 - 1846845 + F 88 -16.1 -3.14602 | gap 2, opp_overlap 1846801, overlap 1846799 GCTTATGTCGAATAT GTGGGC-CGGC-CGTGACGAT TTCC GTCGACACGCGCCGCGCCCAC TATTGATGCAATGCG TERM 1350 1847557 - 1847529 - g 75 -4.4 -4.66609 | opp_overlap 1847539, overlap 1847530 1847531 GACTGGACGCAAAAA CTCGGCGACGCG TTTCT CGCGCAGCAGAA AGACGTGTTCGCCGC Bphy_7194 1847145 - 1848533 + | hypothetical protein TERM 1351 1848965 - 1848951 - g 77 -11.4 -3.72576 | CGGGCGCCGAGGAAA TGCGGC TGC GCCGCA TCGGCCGAAACGAGC Bphy_7195 1848545 - 1849465 + | hypothetical protein Bphy_7196 1849534 - 1850397 + | hypothetical protein Bphy_7197 1850523 - 1850963 + | hypothetical protein Bphy_7198 1851692 - 1851009 - | DNA-3-methyladenine glycosylase I TERM 1352 1851949 - 1851976 + H 79 -12.6 -3.28791 | CGGGCCGTTGGGCTT GCGCGGCGGGCG TCAG CGTTCGCCGCCC TTATCAAGGAGAGGT Bphy_7199 1851998 - 1852450 + | methionine-R-sulfoxide reductase TERM 1353 1852496 - 1852553 + T 81 -15 -2.64099 | gap 3, opp_overlap 1852513, overlap 1852496 1852514 CGTCGCATGCCGTTT CGTTCCACGCGACCGAACGCGCTAGCCTG CCA CAGGC-AGCGC-TTCGATCGCGTCGC-CG ATTCTGATCGCACCG TERM 1354 1852514 - 1852537 + T 76 -13.2 -3.06796 | gap 1, opp_overlap 1852513, overlap 1852496 1852496 TCCACGCGACCGAAC GCGCTAGCCTG CCA CAGGC-AGCGC TTCGATCGCGTCGCC Bphy_7200 1853020 - 1852517 - | MOSC domain-containing protein Bphy_7201 1853132 - 1853455 + | hypothetical protein Bphy_7202 1854775 - 1853495 - | hypothetical protein TERM 1355 1856071 - 1856047 - R 78 -11.3 -3.70902 | opp_overlap 1856044 1856043 1856042 1856039, overlap 1856048 GTCTTTATACTCAAA TGCCCACGCCG GAC CGGAGTGGGCG TGCTGGTCTTTTACG TERM 1356 1856070 - 1856048 - R 80 -14.8 -2.82327 | opp_overlap 1856044 1856043 1856042 1856039, overlap 1856047 TCTTTATACTCAAAT GCCCACGCCG GAC CGGAGTGGGC GTGCTGGTCTTTTAC TERM 1357 1856220 - 1856249 + r 79 -5.6 -4.7416 | overlap 1856224 CCGAGGGGCATGGCC GCGACGGGTCGA CATCGA TCGAACCGATGC TTTTTGCGCTTTTGA TERM 1358 1856988 - 1856975 - R 72 -5.9 -4.44667 | overlap 1856977 CTTCGGAAGAAGAAA CAGCG GAAC CGCCG ACCCGCCAACTCAGC TERM 1359 1857059 - 1857039 - R 78 -7.6 -4.4648 | gap 1 AGTGCCACGAGAAAA TGCCGGTCG GACA CGACCG-CA GAGAACAAAGACGGG TERM 1360 1857180 - 1857131 - R 100 -9.3 -5.00616 | gap 1, overlap 1857135 1857136 CCTTGCTGCAAAAAA GAAACTCTTCGCGGTGCCCATCGC GCG GCGACGGGCACCTTAACGA-TCTC AATCGGGCGACGACT TERM 1361 1857177 - 1857135 - R 100 -9 -5.04249 | overlap 1857131 1857136 GCTGCAAAAAAGAAA CTCTTCGCGGTGCCCATCGC GCG GCGACGGGCACCTTAACGAT CTCAATCGGGCGACG TERM 1362 1857176 - 1857136 - R 81 -12.5 -3.61465 | overlap 1857135 1857131 CTGCAAAAAAGAAAC TCTTCGCGGTGCCCATCGC GCG GCGACGGGCACCTTAACGA TCTCAATCGGGCGAC Bphy_7203 1858144 - 1857179 - | parB-like partition protein TERM 1363 1857372 - 1857392 + g 89 -18.3 -3.03159 | opp_overlap 1857358 1857356 1857370 AGCGCAGCCAACACC TCCGGCGCG GTC CGCGCCGGA TCTTCCGCGAGTTCG TERM 1364 1857637 - 1857656 + g 72 -2.8 -4.65895 | gap 1, overlap 1857620 GCTTGTACCACACGC CCTG-TTCC CAC GGACTCAGG TTTTTCCGTGCCCGG Bphy_7204 1859308 - 1858157 - | cobyrinic acid ac-diamide synthase Bphy_7205 1860696 - 1859395 - | initiator RepB protein TERM 1365 1860461 - 1860477 + g 74 -2.1 -4.80396 | overlap 1860465 1860473 GTCGTGGCCAGCTGT CTGAGCG CTT CGCGAAG TTTTTCGGTGTTTTC TERM 1366 1861649 - 1861622 - R 76 -4.8 -4.72846 | gap 1 GGACAGATCGAAAAA CCGCAGGCTGC ATGATGA GCAGCC-GTGG ATATGGACGGGGACC TERM 1367 1861798 - 1861755 - R 86 -3.2 -5.54403 | gap 1, overlap 1861756 AAAAAATAAGAAAAA CCGCGTTCGATCAACGACC TAAAACT GATAGTTGATCGA-CACGT CGCACACCCCATTGG Bphy_7206 1862612 - 1861773 - | MltA-interacting MipA family protein TERM 1368 1862696 - 1862729 + H 83 -9.6 -4.27316 | opp_overlap 1862715 TTCACAACGATGATC CGGCGGCAGGT-CAGC AAAC GCCGTACCTGCC-CCG TTTTGACTTGCCGCA Bphy_7207 1862827 - 1863243 + | MarR family transcriptional regulator TERM 1369 1863389 - 1863409 + F 74 -13.3 -2.57132 | overlap 1863388 CGAATCTCTGATCTT CGTCGATCG CCC CGGTCGACG CTTCTACAGAAGCGC Bphy_7208 1863429 - 1864370 + | LysR family transcriptional regulator Bphy_7209 1864691 - 1864374 - | hypothetical protein Bphy_7210 1866230 - 1864770 - | RND efflux system outer membrane lipoprotein TERM 1370 1865831 - 1865812 - G 71 -4.2 -4.56775 | gap 1, overlap 1865813 AGTCCCGTCGAAAAA TCGGGCACA GTA TG-GCCCGC CAGCCCTTTGTGCAC Bphy_7211 1867512 - 1866253 - | RND family efflux transporter MFP subunit TERM 1371 1866863 - 1866891 + g 95 -15.3 -3.96148 | TCGACGTTACGCGCG GTGATGACGCCGT CGA ACGGCGCCGTCAC TTTCTCGTACGACAC Bphy_7212 1870719 - 1867522 - | acriflavin resistance protein TERM 1372 1869307 - 1869295 - G 82 -5.5 -4.82901 | overlap 1869298 CGTGCGCGAGAAAAA GTACG ACG CGCAC ATCGCGAACACGACG TERM 1373 1869461 - 1869471 + g 70 -2.4 -4.60487 | overlap 1869456 1869455 AGGATCGCATCGTGC AGCG GCG CGCC TTTTTCGAGGTGATG TERM 1374 1869832 - 1869859 + g 80 -8.4 -4.35524 | TTTCACTTGCTGGAT GATGGTCAGTGT CGAC GCACTGCCCGTC TTTTCGATTTGCAGC TERM 1375 1871133 - 1871151 + G 71 -8 -4.10552 | GTCGTCGTTTCGTGT GCGCTGGC TGC GCCGGCAC TTTCCTTTGCTCAGG Bphy_7213 1871097 - 1871420 + | hypothetical protein TERM 1376 1871428 - 1871452 + T 82 -10 -4.1552 | opp_overlap 1871429 1871432, overlap 1871429 1871432 GAAACTGAGTGAGAT ATAACGGGCG CGCGC CGCCCGTTAA TTTCTTGCGACGCTC TERM 1377 1871429 - 1871451 + T 79 -13.5 -3.08991 | opp_overlap 1871429 1871432, overlap 1871428 1871432 AAACTGAGTGAGATA TAACGGGCG CGCGC CGCCCGTTA ATTTCTTGCGACGCT TERM 1378 1871451 - 1871429 - T 77 -13.5 -2.92656 | opp_overlap 1871429 1871428 1871432, overlap 1871432 AAACTGAGTGAGATA TAACGGGCG CGCGC CGCCCGTTA ATTTCTTGCGACGCT TERM 1379 1871448 - 1871432 - T 71 -10.8 -3.60525 | opp_overlap 1871429 1871428 1871432, overlap 1871429 CTGAGTGAGATATAA CGGGCG CGCGC CGCCCG TTAATTTCTTGCGAC TERM 1380 1871432 - 1871448 + T 75 -10.8 -3.68738 | opp_overlap 1871432 1871429, overlap 1871429 1871428 CTGAGTGAGATATAA CGGGCG CGCGC CGCCCG TTAATTTCTTGCGAC TERM 1381 1871461 - 1871510 + T 85 -15.3 -3.15544 | gap 4, overlap 1871509 CCGTTAATTTCTTGC GACGCTCAAGGCGAGCGGTCGCCGC ACAT GCGGCGACCG-T-GCCT-GA-CGTC TTGCTGACGCTCGCC Bphy_7214 1873719 - 1871527 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 1382 1873637 - 1873665 + g 81 -13.7 -3.53012 | overlap 1873638 TCGAAGCCGATGGTG AGCGCGAGCGCGG CCA CCGTGCCCGCGCC TTTCAGAAAGGAGCG TERM 1383 1873638 - 1873664 + g 84 -17.2 -2.71712 | overlap 1873637 CGAAGCCGATGGTGA GCGCGAGCGCGG CCA CCGTGCCCGCGC CTTTCAGAAAGGAGC Bphy_7215 1874184 - 1873723 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 1384 1874264 - 1874280 + H 75 -10.1 -3.70902 | overlap 1874265 TTGCGAGTCGGAGTG TGGCGCA AAG TGCGCCG TTTCGCTGTCCAAAA Bphy_7216 1874401 - 1875081 + | hypothetical protein Bphy_7217 1878054 - 1875112 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1385 1876720 - 1876708 - G 70 -2.6 -4.71426 | CGCCGACGAACAAAA CGCG GGGTT CGCA TACGTGCGGCGCAGG Bphy_7218 1879289 - 1878051 - | extracellular solute-binding protein TERM 1386 1878629 - 1878675 + g 80 -8.6 -4.40561 | opp_overlap 1878627 1878629 1878631, overlap 1878626 1878631 ACATCTTGGCAAATA TATCGGCGACGGCAGGCGTGTT TAA ATTGAGCGTGCCGTCGTCGATC TTCTTTTTCCAGGCG TERM 1387 1878631 - 1878673 + g 77 -11.2 -3.80746 | opp_overlap 1878629 1878627 1878631, overlap 1878629 1878626 ATCTTGGCAAATATA TCGGCGACGGCAGGCGTGTT TAA ATTGAGCGTGCCGTCGTCGA TCTTCTTTTTCCAGG Bphy_7219 1879905 - 1879687 - | hypothetical protein TERM 1388 1879977 - 1880002 + r 87 -12.6 -3.86822 | gap 1 GTGCCGTTCCGGATC GGGCAG-GCGG GGTCG CCGCGCTGCCC TTTATCGCACGCTTA Bphy_7220 1880431 - 1880015 - | OsmC family protein TERM 1389 1880576 - 1880591 + r 73 -11.8 -3.12351 | opp_overlap 1880576 TTGCGCTACAAAAAA CGGGCC TTGC GGCCCG TTCGATGTCGAAAGA TERM 1390 1880591 - 1880576 - R 100 -11.8 -5.24129 | opp_overlap 1880576 TTGCGCTACAAAAAA CGGGCC TTGC GGCCCG TTCGATGTCGAAAGA Bphy_7223 1882378 - 1881464 - | LysR family transcriptional regulator TERM 1391 1884540 - 1884530 - g 72 -8.2 -4.19238 | opp_overlap 1884530 1884528 CCGCGAATTCGAAAA GCGG GAT CCGC TGTTCTGGAAGCCGT Bphy_7224 1882500 - 1884620 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 1392 1884644 - 1884672 + T 100 -16.8 -4.18018 | gap 1 ATGCGATTCGCGCGG CGAGCCGCAGCAC GGGC GTGCTGCGGC-CG TTTTGCGTCAGGCGC Bphy_7225 1885465 - 1884680 - | protein of unknown function DUF899 thioredoxin family protein Bphy_7226 1886188 - 1885664 - | hypothetical protein TERM 1393 1886461 - 1886444 - H 78 -9.1 -4.12532 | CTTCTGAGACATAAA GCGCTGC GTAG ACAGCGC ATATGACGTGTACCG Bphy_7227 1886601 - 1887389 + | extracellular solute-binding protein Bphy_7228 1887397 - 1888128 + | polar amino acid ABC transporter, inner membrane subunit Bphy_7229 1888125 - 1888865 + | polar amino acid ABC transporter, inner membrane subunit Bphy_7230 1888900 - 1890120 + | oxidoreductase molybdopterin binding TERM 1394 1890152 - 1890166 + G 91 -9.2 -4.82901 | TCCCGGCCGACCCGC CGCGCC ATT GGCGTG TTTTTGTCGGCGGCA Bphy_7231 1890113 - 1890715 + | cytochrome c class I TERM 1395 1890747 - 1890724 - T 71 -11 -3.31144 | opp_overlap 1890722 CCTTTAGCGTGACAA GATGCGGCTT CGAA ACGCCGCATC ACTGGATTGAATTCA Bphy_7232 1892136 - 1890760 - | xenobiotic (desulfurization)monooxygenase subunit A TERM 1396 1891980 - 1891957 - G 71 -3.8 -4.56597 | gap 1, overlap 1891960 1891969 GCTGTCGGCGAAAAA GATCGCATCGA ACT TCG-CGCGCTC CGCAATCTGCGCGAG Bphy_7233 1893037 - 1892180 - | ABC transporter related Bphy_7234 1893963 - 1893064 - | binding-protein-dependent transport systems inner membrane component Bphy_7235 1894844 - 1893987 - | binding-protein-dependent transport systems inner membrane component Bphy_7236 1895938 - 1894856 - | ABC sulfate ester transporter, periplasmic ligand binding protein TERM 1397 1895250 - 1895275 + g 75 -3.9 -4.60487 | gap 1, overlap 1895247 1895254 ATCACGAGCAGATGC GACTGGCGCGTG AAT TGCGGGCC-GTC TTTTTGCGACTCGTA TERM 1398 1895769 - 1895809 + g 74 -10.9 -3.61398 | overlap 1895769 1895804 AATTGGTGCACGGTC GCAGCCGGCGAGCCGCCGA ACG TGGGCGGATCGCCCGCGCC TTGTTGCGCGACGCC TERM 1399 1895769 - 1895808 + g 71 -14.2 -2.76696 | gap 1, overlap 1895769 1895804 AATTGGTGCACGGTC GCAGCCGGCGAGCCGCCGA ACG TGGGCGGATCGCCCGC-GC CTTGTTGCGCGACGC Bphy_7237 1896809 - 1896000 - | methyltransferase type 11 Bphy_7238 1897552 - 1896995 - | response regulator receiver protein TERM 1400 1897593 - 1897583 - R 71 -8.2 -3.99324 | opp_overlap 1897583, overlap 1897584 TTCGATGAGCACAAA CGCG CAT CGCG TATTCCCGATTCACG Bphy_7239 1898461 - 1897754 - | phosphate uptake regulator, PhoU TERM 1401 1898247 - 1898220 - G 86 -14.2 -3.77177 | gap 1, opp_overlap 1898206, overlap 1898221 ATCAACAGACGTAAA TCGCGCG-CGGCA GGT TGCCGGCGCGCAA TGACGCGATGAATTT TERM 1402 1898244 - 1898221 - G 77 -14.6 -2.85583 | gap 1, opp_overlap 1898206, overlap 1898220 TCAACAGACGTAAAT CGCGCGCGGCA GGT TGCCG-GCGCG CAATGACGCGATGAA Bphy_7240 1898838 - 1898524 - | hypothetical protein Bphy_7241 1898912 - 1899127 + | hypothetical protein Bphy_7242 1900138 - 1899134 - | short-chain dehydrogenase/reductase SDR Bphy_7243 1901833 - 1900190 - | glucose-methanol-choline oxidoreductase TERM 1403 1901085 - 1901121 + g 71 -13.5 -2.92246 | CGGATTTCCGCGCCC GCGTGCACGGCGCGCGG AAT CCACGTGACGAGCGCGC TCTGCTTCGCATTGG Bphy_7244 1902479 - 1901823 - | hypothetical protein Bphy_7245 1903413 - 1902472 - | hypothetical protein TERM 1404 1902664 - 1902628 - G 71 -9.4 -3.72695 | overlap 1902630 ACCGCGTGCATGAAA GAGCGC-ACCGACGACGC CCA GCGCCG-CGGTCACGCGC AACCCGATGCGCGTG TERM 1405 1902972 - 1902942 - G 86 -14.7 -3.48276 | GCGCGCCCGACAGAA GGAGCGCCATCGG TGCGC CCAATGGCGCGCC GTAGAAGAGGTTGTG Bphy_7246 1904626 - 1903484 - | mandelate racemase/muconate lactonizing protein SEQUENCE gi|186474323|ref|NC_010627.1| Burkholderia phymatum STM815 plasmid pBPHY02, complete sequence (length 595108) Bphy_7251 4803 - 3757 - | hydrogenase expression/formation protein HypE Bphy_7252 5930 - 4800 - | hydrogenase expression/formation protein HypD TERM 1 5542 - 5520 - G 75 -4.1 -4.62471 | GCCAATGCTGAAAAA CACAACCTG TCGGT CAGATCGCG CGCGAGAGAATGCCA Bphy_7253 6193 - 5927 - | hydrogenase assembly chaperone hypC/hupF Bphy_7254 8516 - 6207 - | SUA5/yciO/yrdC domain-containing protein Bphy_7255 9381 - 8503 - | hydrogenase accessory protein HypB TERM 2 8970 - 8995 + g 71 -13.9 -2.72991 | overlap 8961 TCTGCACGGCGGGCG CGCCGGCCGCG CGAA CGCGCTCGGCG TCGTTGGCGGTCTGC Bphy_7256 9872 - 9531 - | hydrogenase expression/synthesis HypA Bphy_7257 10875 - 9865 - | HupK protein TERM 3 10390 - 10353 - G 71 -10.4 -3.64703 | opp_overlap 10337 10353 CCGGCCGGATCGAAA CGGGCCGTGCGGCCTG TTTTTG CAGGCCGTTCAGCCAG CGCGCCGGTAGCGTC TERM 4 10353 - 10368 + g 84 -8.2 -4.57341 | opp_overlap 10353, overlap 10337 CCGGCCGGATCGAAA CGGGCC GTGC GGCCTG TTTTTGCAGGCCGTT Bphy_7258 11552 - 10872 - | rubredoxin-type Fe(Cys)4 protein TERM 5 11077 - 11057 - G 85 -4.6 -5.0538 | GCGCAGGTGAAAAAA GCGAGCAC ATCCG GAACTCGC CGAGCGTATCGAGCC TERM 6 11324 - 11289 - G 75 -3.2 -4.74103 | opp_overlap 11298, overlap 11291 GCGCGAATTCAAAAA GGGCAGGTCGCACA TGCGGGTC TGTGCTATCTGCTC GAACGTGCCTTCGAT Bphy_7259 12430 - 11552 - | HupH hydrogenase expression protein Bphy_7260 12873 - 12427 - | hydrogenase-1 expression HyaE Bphy_7261 13178 - 12870 - | hydrogenase assembly chaperone hypC/hupF Bphy_7262 13822 - 13178 - | hydrogenase expression/formation protein Bphy_7263 14536 - 13826 - | Ni/Fe-hydrogenase, b-type cytochrome subunit TERM 7 14118 - 14099 - G 100 -2.1 -5.56673 | AGCCACAATAAAAAA GCCAAAC ATCGCG ATCTGGC CGAGCGGATTGTGGC Bphy_7264 16360 - 14570 - | nickel-dependent hydrogenase large subunit Bphy_7265 17517 - 16357 - | hydrogenase (NiFe) small subunit HydA TERM 8 18901 - 18880 - g 79 -2.1 -5.05782 | opp_overlap 18897, overlap 18881 AGGTATTTCAAAAAA TGCCTGAGC GATC GCTCCAGCG GTCTGGACTACCCAG Bphy_7266 18316 - 19584 + | diaminobutyrate--2-oxoglutarate aminotransferase TERM 9 20396 - 20428 + G 74 -11.2 -3.68529 | gap 1, opp_overlap 20363, overlap 20397 GCTGCACGCGGTCCT CCGCGCAGCGCGCGA TGCG TCGC-CGCGGCGCGA TTTCCCTGATCCGGT TERM 10 20397 - 20427 + G 77 -14.7 -2.80796 | gap 1, opp_overlap 20363, overlap 20396 CTGCACGCGGTCCTC CGCGCAGCGCGCGA TGCG TCGC-CGCGGCGCG ATTTCCCTGATCCGG Bphy_7267 20170 - 20457 + | hypothetical protein TERM 11 20873 - 20889 + G 75 -4.3 -4.67982 | GGTAAGGCCGAGCAG CTATGGC GTC GCCTTGG TTTTGTTGAGTACGG Bphy_7268 20465 - 21085 + | GCN5-related N-acetyltransferase Bphy_7269 21082 - 21552 + | hypothetical protein Bphy_7270 21554 - 22141 + | isochorismatase hydrolase TERM 12 23223 - 23241 + G 72 -13.1 -3.06696 | opp_overlap 23218 ATTGAGGAACTGGCA GGCGCGG AGTTG CCGCGCC TATGTTGACCGGCAA Bphy_7271 22224 - 23249 + | hydrogenase expression/formation protein HypE TERM 13 24550 - 24572 + G 71 -13.4 -2.98823 | opp_overlap 24548 24543 24541 ACTGAAGACGACAGT TGCGCTCGCG GAT CGCGAGCGAA TCTATGTGAGCCAGC Bphy_7272 23243 - 25618 + | (NiFe) hydrogenase maturation protein HypF TERM 14 25785 - 25803 + F 70 -12.4 -2.71924 | opp_overlap 25776 25774, overlap 25784 TGAAGACGGCCACCG GCCAGCGC TCG GTGCTGGC GTTTCGCGGCCGATA TERM 15 27173 - 27147 - f 87 -15.3 -3.38291 | opp_overlap 27139 27147 CGGATAACGCCATAA TGCCGTTCAGT TAGGC ACTGAACGGCA TTTTTGTTTTTGTTC TERM 16 27147 - 27173 + F 100 -15.3 -5.74684 | opp_overlap 27147, overlap 27139 CGGATAACGCCATAA TGCCGTTCAGT TAGGC ACTGAACGGCA TTTTTGTTTTTGTTC TERM 17 27297 - 27278 - g 71 -12.8 -3.04144 | GCTCGATGCGCAACA GCCGGCCG ACCT CAGCCGGC TGGCTGAGCATCTGC TERM 18 28510 - 28481 - g 100 -17.1 -4.4078 | overlap 28482 TCTTCCCAATGAAAA GCGACCCGGCCGC GCAT GCGACCGGGTCGT CAAATCCCGCCCCAA TERM 19 28509 - 28482 - g 100 -20.6 -3.24146 | overlap 28481 CTTCCCAATGAAAAG CGACCCGGCCGC GCAT GCGACCGGGTCG TCAAATCCCGCCCCA Bphy_7275 27237 - 28565 + | transposase IS4 family protein TERM 20 28869 - 28908 + F 78 -14.2 -2.51133 | overlap 28868 28871 GTCTGACCCAGTCGC CGTTGCGAACCCGCCGGT GTTC GTCGGCGGGTGCGCGGTG ATTGCTGCCTGACTG TERM 21 28871 - 28906 + F 73 -13.2 -2.79098 | overlap 28869 28868 CTGACCCAGTCGCCG TTGCGAACCCGCCGGT GTTC GTCGGCGGGTGCGCGG TGATTGCTGCCTGAC TERM 22 29774 - 29808 + G 74 -2.1 -4.83169 | gap 1 CGGTGCTTCCGTGGA TCTGGGATG-CGCG GCACGCAA CACGTCAGCCCAGA TTTTTATCAGCCGGT Bphy_7276 29593 - 30603 + | yecA family protein TERM 23 32620 - 32663 + G 100 -19.6 -3.53012 | overlap 32621 GATTTCACGCATCCG GGCCTGCTGGGCTCGGCGAA GGAA TTTGCCGAGCTCAGCCGGCG TTTGGCAAAAAGCGA TERM 24 32621 - 32662 + G 100 -23.1 -2.71712 | overlap 32620 ATTTCACGCATCCGG GCCTGCTGGGCTCGGCGAA GGAA TTTGCCGAGCTCAGCCGGC GTTTGGCAAAAAGCG TERM 25 33052 - 33030 - g 70 -4.8 -4.3534 | GGCGAAGCAGGAAAA GGTACTGG TGTTCAC CCAGTTCC GCGAAACCACCGAGC Bphy_7277 30838 - 33516 + | non-specific serine/threonine protein kinase TERM 26 33627 - 33592 - g 93 -4.7 -5.41143 | gap 2 GAGCGGCGAAAAAAA GCGGAGCAGCTGGTCGC CAGA GCGACCAGG-GCTG-GC AAGACCCTGTCACCC TERM 27 33871 - 33889 + G 70 -13.8 -2.62463 | opp_overlap 33870 33868 33867, overlap 33870 TGTCCAGCAAAGCAG TGGCGCGC GTT GCGCGCCG ATTGTGCGTCGTCGA TERM 28 33969 - 33982 + G 76 -9.5 -4.07568 | GGGCCGCATCTGCCA GCCCG GCAC CGGGC TTTTCCCCGCGCCGA Bphy_7278 33535 - 34536 + | zinc finger, SWIM-type Bphy_7279 35266 - 34949 - | CcdB-like toxin protein Bphy_7280 35508 - 35266 - | post-segregation antitoxin CcdA Bphy_7283 37055 - 38140 + | hypothetical protein Bphy_7284 38130 - 38342 + | hypothetical protein Bphy_7285 38348 - 39268 + | hypothetical protein Bphy_7286 39347 - 39739 + | hypothetical protein TERM 29 39807 - 39840 + F 74 -8 -4.17316 | CATCATGGAGATCCT GGGGCAAGCGGGGT TTCATC ACCCCGGTATCCCC TTGTTTTCAGCGCAT TERM 30 41168 - 41208 + F 83 -15.3 -2.71364 | opp_overlap 41190 CCGGCGCAGTCTGGT TCGCGCGCGCCTGCTCGCG AAA CGCGGAAAAGCGCGTGCGA TGCTTGCCAGGCTCA TERM 31 43813 - 43778 - f 80 -9.7 -4.18018 | gap 2, overlap 43779 GCGCGCCACCGAAAA GCGCGCGCTGCTCGAGA TCGA CCGCGAGC-GCG-GCGC GGCGGCCAGGCTGCA TERM 32 44115 - 44058 - f 84 -12.6 -3.64703 | gap 2 GCCGGTTCACGCAAA GGGCGCTGCTCGTTCAGGCACGGCGC GTCCCGCG GCGCCCCGCCCGG-CGCGC-GCGCCC CGCGTCCCATCCGCG Bphy_7289 44174 - 44440 + | hypothetical protein Bphy_7290 45302 - 44838 - | hypothetical protein Bphy_7292 46639 - 47001 + | hypothetical protein Bphy_7293 47131 - 47820 + | hypothetical protein TERM 33 48329 - 48309 - g 82 -4.5 -5.00616 | GGCTCGTGGAAAAAA GGGGCGCGC TCG ACGCGATCC TGGTGACGGGCGATA Bphy_7294 48182 - 49462 + | metallophosphoesterase TERM 34 50388 - 50376 - g 83 -5.5 -4.89966 | overlap 50377 ATACTGAAAAACAAA CCGTC AAC GACGA ACGTGCCAGGCGCCT Bphy_7295 49467 - 50573 + | hypothetical protein TERM 35 51162 - 51174 + G 93 -3.3 -5.26875 | overlap 51160 TTGAGGTGCGAAGGG GCGAC GCC GTGGC TTTTTTGCTTGACGG Bphy_7296 50552 - 51580 + | hypothetical protein Bphy_7297 51577 - 52455 + | hypothetical protein TERM 36 52972 - 52957 - g 72 -6.8 -4.28762 | overlap 52959 AGAACGGGATGAAAA GACGGC GCTT GCCATC TGGTCGCAAATGCCG TERM 37 53325 - 53292 - g 70 -4.6 -4.38712 | gap 2, opp_overlap 53301, overlap 53293 GTGACGCCGATAAAA CCGAAGACTTCGCCGC TGTC GCG-CGAT-TCCTCGG GCGAGCCTTCCCGAG TERM 38 53410 - 53428 + G 76 -6 -4.57073 | TGGGCCATATTCCAC CGAGAG GCAAGCG CTCTCG TTTTTGGGCACGCTG Bphy_7298 52553 - 54553 + | hypothetical protein TERM 39 57091 - 57111 + G 72 -3.3 -4.62069 | overlap 57092 AACGAGTTTGGCGAA GGAAATGTC GTC GATATTTCG TTTTTCGGCTCACCG TERM 40 57410 - 57442 + G 83 -9.8 -4.34402 | gap 1, overlap 57411 GTCACTATGGATGGA TCGGCGCA-CTGGCG GTCG CGCCCGATGCGTCGG TTTTCCTGTCCGGCG Bphy_7301 56695 - 60438 + | WD-40 repeat-containing protein Bphy_7302 60440 - 61171 + | hypothetical protein TERM 41 61601 - 61623 + T 87 -7.6 -4.72272 | GATGACGATCAGGCC TGCAGGCGGT CAA ACCGCGCGCA TTTTTAATCAGGCCC Bphy_7303 62407 - 61682 - | RES domain-containing protein TERM 42 62099 - 62109 + gT 71 -6.8 -4.13767 | overlap 62095 ATAGCCGAGCTCTGC GCAC GCG GTGC TTTTAGCGTAGGCGG Bphy_7304 62753 - 62367 - | hypothetical protein TERM 43 63752 - 63788 + G 70 -5.2 -4.4017 | gap 2, opp_overlap 63735, overlap 63750 63758 CCGGCCAAGGGCCGC GTCGAGCGCGCACACCAG ACG CTGGTGTCCCCG-T-GAC TTTTGTGCAGATTAC Bphy_7305 62993 - 63787 + | integrase, catalytic region Bphy_7306 63992 - 66934 + | transposase Tn3 family protein TERM 44 74750 - 74730 - g 71 -10.3 -3.61922 | overlap 74719 AATACGGACCTGAAA GGCGCCGTC ATT GCCAGCGCC GCCGGCGCCTCGAAG TERM 45 75688 - 75650 - g 73 -12.5 -3.30159 | GCAACTGTCGGATAA CGATCCTGCGAAGGCTG CGGCC CAGGATTCGCAGAATCG CGGTGCTGGCTATCT Bphy_7307 67305 - 76367 + | filamentous haemagglutinin outer membrane protein Bphy_7308 76369 - 76932 + | hypothetical protein Bphy_7309 76936 - 77259 + | hypothetical protein Bphy_7310 77363 - 78010 + | hypothetical protein Bphy_7311 78303 - 78962 + | hypothetical protein TERM 46 79374 - 79413 + G 74 -10.7 -3.71649 | CCACACTGCCCGACG CGGTC-CGCAGGCAGGGCG CCTC CGCACTGCC-GCTCGACCG TTTCGCGTTTGCGCG TERM 47 80639 - 80662 + G 81 -11.8 -3.86897 | gap 1 GGCGTCGACTACGGC CG-CGTGTTCG GGC CGAACACGGCG TTTCTGGCAGGTACG Bphy_7312 79046 - 80833 + | polypeptide-transport-associated domain-containing protein TERM 48 81221 - 81201 - g 84 -13.9 -3.57651 | TGCCACAGGAGATAA GCTGCGCGG AAG CCGCGCGGC AGCTCGGCGTGATGG TERM 49 81312 - 81363 + G 71 -10.2 -3.65902 | gap 4, opp_overlap 81311 81312, overlap 81311 GCGGCCACTACGAAC CG-GGCGTC-C-GGCTGGGCGGGCGG TTCA CCGC-CGCGCAGCCCGTGACCCCGCG TTTGCCTGACGTCGG TERM 50 81361 - 81312 - g 70 -13.7 -2.52516 | opp_overlap 81311 81312, overlap 81311 GCGGCCACTACGAAC CGGGCGTC-C-GGCTGGGCGGGCGG TTCA CCGC-CGCGCAGCCCGTGAC-CCCG CGTTTGCCTGACGTC TERM 51 81764 - 81821 + G 70 -14.2 -2.64616 | gap 3, overlap 81770 81787 81816 GCTTCGCGCATCCGT GCCTGCGTGC-GGC-CCGCAACGGACACG CCC TGTGTCTGGTGCGGCGCCTGCG-GCCGGC TCATCTCGATGCGCC Bphy_7313 80840 - 81916 + | hypothetical protein Bphy_7314 81921 - 82463 + | hypothetical protein TERM 52 82521 - 82485 - T 79 -13.6 -3.14463 | gap 1, opp_overlap 82476, overlap 82473 82472 AACGCCCGTTACGAA CCGGACCGCGACGGGCC GCCG GGCCCGGC-CGGCGCGG CGAACGTTGCGTCGA Bphy_7315 84004 - 82478 - | integrase family protein TERM 53 82545 - 82563 + g 72 -3 -4.65895 | opp_overlap 82542 GCGTCGACAAACGTG CGCAACTG CGA CAGGTCCG TTTTTGCATACGCGG TERM 54 82666 - 82722 + g 81 -11.4 -4.07687 | gap 2, overlap 82670 GCGCGCGGGCATAGC CGTGCCGCAGCCAGTGCGGCGACGCCTG GCG CAGGCG-CGCCGCGCCCGC-GTGATCCG TTTTCGCGAGGCGAT TERM 55 83063 - 83090 + g 71 -13.4 -3.01924 | gap 1 GTACAGCGTCCAGAT CGCGCGGCGTCGC GCC GCGAC-CAGCGCG TCTTCGCCCGGACTG Bphy_7316 84972 - 84001 - | hypothetical protein Bphy_7317 86359 - 85235 - | integrase catalytic region Bphy_7318 88019 - 86718 - | FRG domain-containing protein TERM 56 88388 - 88369 - H 74 -6.4 -4.50976 | overlap 88371 88384 CGTCAGATGAGAAAA TCTCGCGC CCAA GCACGAAA ACATTCGTTGACGAG Bphy_7319 88828 - 89895 + | ATPase central domain-containing protein Bphy_7320 89885 - 92134 + | hypothetical protein TERM 57 92874 - 92889 + G 79 -6.1 -4.67048 | opp_overlap 92874 CCATTCCGCAATTGA GCGAC AGTTGA GTCGC TTTATTTTGCAGTCC TERM 58 92996 - 93011 + G 73 -6.2 -4.34402 | ACGTCGAGATGGAGG TCAAGA AACT TCTTGA TTTTGATCTCACGCA Bphy_7321 92503 - 93870 + | AAA ATPase Bphy_7322 94882 - 94388 - | hypothetical protein Bphy_7323 95975 - 94872 - | hypothetical protein Bphy_7324 96136 - 97401 + | integrase family protein Bphy_7325 97526 - 97795 + | hypothetical protein Bphy_7326 98625 - 98347 - | histone family protein DNA-binding protein Bphy_7327 98923 - 99285 + | hypothetical protein Bphy_7328 101295 - 99313 - | band 7 protein TERM 59 100542 - 100579 + g 72 -8.3 -4.12188 | gap 1, opp_overlap 100540 CCTCAACCAGAACCC GCTCCT-GCCGTCCGCGG TGG CCGCCGGCGGCGAGAAAC TTTTCCGGCTCCTGA Bphy_7329 101923 - 101468 - | hypothetical protein TERM 60 101543 - 101572 + g 71 -12.1 -3.23395 | opp_overlap 101522, overlap 101539 101544 CCGATCCCAGGCCGC GAGGTAGCGGTGC TTCG GCACCGCTACCAA TTGCTCGTCGTGGAT TERM 61 101544 - 101571 + g 77 -15.6 -2.53715 | overlap 101539 101543 CGATCCCAGGCCGCG AGGTAGCGGTGC TTCG GCACCGCTACCA ATTGCTCGTCGTGGA Bphy_7330 103209 - 101992 - | hypothetical protein TERM 62 102024 - 102034 + g 86 -6.8 -4.90906 | overlap 102013 AATCGTACTTGAGGC GCAG GTG CTGC TTTTTCGTCTTCTCC Bphy_7331 103694 - 103437 - | putative transmembrane protein Bphy_7332 104379 - 103873 - | hypothetical protein Bphy_7333 105362 - 104508 - | PpiC-type peptidyl-prolyl cis-trans isomerase Bphy_7334 107198 - 105366 - | polypeptide-transport-associated domain-containing protein Bphy_7335 109243 - 107198 - | filamentous haemagglutinin outer membrane protein TERM 63 107911 - 107877 - G 76 -2.7 -4.84918 | gap 1, opp_overlap 107899, overlap 107878 107879 107897 GTCAGAAAGAGAAAA CTGCCACCC-TCGCGC GAAT ACGCGACGGGTTGCCC GCCGTTGATACCGCC TERM 64 108614 - 108603 - G 79 -5.8 -4.59773 | TCCGACGGCGAAAAA CTGG TATC CCAG GTCGTGGTGCTATCA TERM 65 109317 - 109303 - R 71 -7.8 -4.07885 | GACTCCGCCCGAAAA CCCACA ACT CGTGGG CTCATGCAATGCGCA Bphy_7336 110321 - 109488 - | hypothetical protein Bphy_7337 110877 - 110524 - | hypothetical protein Bphy_7338 111173 - 110874 - | adhesin Bphy_7339 112722 - 111175 - | adhesin HecA Bphy_7340 113263 - 112919 - | hypothetical protein TERM 66 113268 - 113282 + r 78 -8.5 -4.14541 | opp_overlap 113268 113267 CCATAAAGCACAAAC CCGGC GCGTG GCCGG TTTGTCTCATTGCTG Bphy_7341 114431 - 113898 - | hypothetical protein Bphy_7342 115100 - 114741 - | hypothetical protein TERM 67 115239 - 115210 - R 70 -5.1 -4.48713 | gap 2, opp_overlap 115210, overlap 115212 CGGAGGAAGAAGAAA CGCTGCGCAAGGT GAAGTT ACCTTGCG--GCG TGTTGATCGTGTATC Bphy_7343 115633 - 115283 - | hypothetical protein Bphy_7344 115877 - 115647 - | hypothetical protein Bphy_7345 116364 - 116002 - | hypothetical protein Bphy_7346 124361 - 116361 - | filamentous haemagglutinin outer membrane protein TERM 68 120263 - 120280 + g 72 -11.3 -3.53444 | TGCCGGCATTGTTTG TCCCGAC GACG GTCGGGA TTTCGACGAACGTGA TERM 69 124583 - 124529 - H 74 -7.2 -4.386 | gap 2, overlap 124576 TAAGGCTTCACAAAA GGCCCTGTCTGTTCGGCACCGAGGTA CTACC TACC-CGAT-CCGAAGAAGCCGGGCC GCACCCGCCGCATCC TERM 70 124637 - 124660 + G 81 -12.4 -3.85698 | gap 1, opp_overlap 124622 124635 124633 CCGCTAGAAAAGCTC GCGAGCCTGCC GGA GGCGGGC-CGC TTTCTGCGCGACGGC Bphy_7347 124616 - 124837 + | hypothetical protein TERM 71 124894 - 124838 - f 77 -12.1 -3.61398 | overlap 124839 TCCTGCGCTGAATAA CTCCGTGAGGGGCAAGCCGCTACGGGC TAC GCCCTCCGCAGCTTCCCCCTCACAACC GACGCCTCCCATCCC TERM 72 124893 - 124839 - f 83 -15.6 -2.76696 | overlap 124838 CCTGCGCTGAATAAC TCCGTGAGGGGCAAGCCGCTACGGGC TAC GCCCTCCGCAGCTTCCCCCTCACAAC CGACGCCTCCCATCC Bphy_7348 125426 - 126829 + | hypothetical protein Bphy_7349 126875 - 127537 + | hypothetical protein Bphy_7350 127610 - 127912 + | hypothetical protein Bphy_7352 129564 - 128434 - | transposase IS116/IS110/IS902 family protein Bphy_7354 130014 - 130331 + | transposase IS3/IS911 family protein Bphy_7355 130328 - 131287 + | integrase catalytic region TERM 73 132081 - 132091 + T 74 -8.2 -4.19276 | AGGCAATACCAGGGA GCGC ACG GCGC TTTTAGCCATTTTCA Bphy_7357 133401 - 132169 - | protein of unknown function DUF900 hydrolase family protein Bphy_7358 134740 - 134195 - | hypothetical protein TERM 74 134226 - 134239 + g 75 -4.5 -4.65263 | TGCTCCGAGCTAGCC TGCGG GAGT TCGCA TTTCTTTTGCAACGT Bphy_7359 135319 - 134792 - | hypothetical protein Bphy_7360 136168 - 135617 - | hypothetical protein TERM 75 136207 - 136187 - R 75 -5.4 -4.56597 | overlap 136189 GCCCCCCTTGAAAAA TCTCGGCG AACCG CGCCAAAA GTTTCAAGAAGCATA Bphy_7363 139440 - 138649 - | HpcH/HpaI aldolase Bphy_7364 140465 - 140220 - | hypothetical protein TERM 76 140334 - 140374 + g 73 -6.2 -4.34402 | gap 2, overlap 140357 CTGCCGCTCCCGCCA CCGATACGACGCGTTCGC GTTCAGA GCGGA-GCGTCGC-TCGG TTTTCGTGTGAGGCG TERM 77 141315 - 141269 - g 75 -6.6 -4.38116 | gap 1, overlap 141273 141274 TTCATAAAAATGAAA GCAACCGGCGAGGAATACGTT TCCCAG ACCGTACACCTCACCGAT-GC AACGATAGTTGACAT Bphy_7365 140978 - 141478 + | Hcp1 family type VI secretion system effector TERM 78 142171 - 142155 - g 70 -2.1 -4.67755 | opp_overlap 142164, overlap 142156 AGAGTCATTCAAAAA TCTCGCA CTC TGCGTGC TGGACGAAGTTGGTG TERM 79 144171 - 144218 + G 81 -12.1 -3.90744 | gap 2, overlap 144174 ACAGCTTGGCGGACG T-AGCCTGCAGAGTG-GCGCGGA ACTT TCCGCGCGCACACCGCAGGTTCA TTCTTTGAGCGCGAA TERM 80 144174 - 144214 + G 93 -17.6 -3.61652 | gap 1, overlap 144171 GCTTGGCGGACGTAG CCTGCAGAGTG-GCGCGGA ACTT TCCGCGCGCACACCGCAGG TTCATTCTTTGAGCG Bphy_7366 142090 - 144249 + | hypothetical protein Bphy_7367 144297 - 144860 + | hypothetical protein Bphy_7368 145502 - 145167 - | hypothetical protein Bphy_7369 145996 - 145625 - | hypothetical protein Bphy_7370 146787 - 146416 - | hypothetical protein TERM 81 146737 - 146753 + g 70 -7.9 -3.97709 | overlap 146738 CATACCTCCCTTACC TCGCCGG GGA TCGGCGG TTGTTCTTGAATCAT TERM 82 147763 - 147729 - g 72 -13.5 -3.16742 | gap 1 GTGAAGCGTCAGGAA GCAGCGCAGGACCGCG CCGA CGCCGCCC-GCGCCGC TGCCGTCAGCGACCC Bphy_7371 147597 - 147947 + | hypothetical protein Bphy_7372 147966 - 148367 + | hypothetical protein Bphy_7373 148906 - 148688 - | hypothetical protein Bphy_7374 149098 - 148928 - | hypothetical protein Bphy_7375 149386 - 149165 - | hypothetical protein Bphy_7376 149678 - 149478 - | hypothetical protein Bphy_7377 149984 - 150403 + | excisionase domain-containing protein Bphy_7378 150421 - 151005 + | hypothetical protein TERM 83 151471 - 151461 - f 76 -4.6 -4.74103 | TCGCGAAGCGAAAAA GCCG AAG CAGC CCAAGAAGCCGTCAG Bphy_7380 152052 - 152303 + | hypothetical protein TERM 84 153088 - 153105 + F 74 -7.7 -4.13014 | CCGCCGGGTGCCGTA CCGCGTT CGCG AATGCGG TTTTCAACATCTACA Bphy_7382 153130 - 153333 + | cold-shock DNA-binding domain-containing protein Bphy_7383 154510 - 153746 - | histone family protein nucleoid-structuring protein H-NS TERM 85 154813 - 154825 + H 73 -3.3 -4.72272 | TTCATCGGCAATATC TCGTG AGC CTCGA TTTTTGGTCGAACGA TERM 86 154873 - 154886 + H 84 -3.8 -5.24129 | GAAAACTCATTCGGT GCCT GTTTTA AGGC TTTTTTCTGACACGC Bphy_7384 154988 - 155431 + | histone family protein DNA-binding protein TERM 87 155434 - 155417 - T 79 -5.5 -4.86862 | CTGAAAAAACTAAAA GACGCAG CCGC CTGAGTC GAGTCGTTACAACTG TERM 88 155473 - 155494 + T 81 -12.9 -3.59402 | overlap 155468 ACGACAGTGCCTGTA CGGGCTCCC GGCA GGGCGCCCG TTGGTTTCATCTGCA Bphy_7385 156241 - 155741 - | RES domain-containing protein Bphy_7386 156759 - 156238 - | hypothetical protein Bphy_7387 157540 - 157052 - | hypothetical protein TERM 89 157726 - 157708 - g 81 -3 -4.99947 | GCCAACGAAAGAAAA CTACGCGA AGG CCGTGCAG ACCTACTTCGACGGC Bphy_7388 157595 - 158212 + | hypothetical protein Bphy_7389 158781 - 158302 - | hypothetical protein TERM 90 158622 - 158599 - G 83 -5.8 -4.91109 | opp_overlap 158609, overlap 158600 CGCCGAGCAGAAAAA CCGCCGCGCA TCCT CGCGCGTCGC GCATAGCGCGAACGC TERM 91 159513 - 159489 - g 100 -9.1 -5.00616 | GTGTTCGTCAAAAAA CGCGGGCCACG TAT CGCGCGCCGCG TGCCCATTGACGCGT TERM 92 159573 - 159593 + G 71 -9.7 -3.71848 | AAGGCGCGTGAGGGA CAGGCCGTC AAC GATGGTCTG TTGTTCATGGCGACG Bphy_7390 158925 - 159866 + | integrase family protein Bphy_7391 159962 - 160417 + | hypothetical protein Bphy_7393 161883 - 160873 - | yecA family protein TERM 93 161702 - 161668 - G 74 -2.1 -4.83169 | gap 1 ACCGGCTGATAAAAA TCTGGGCTGACGTG TTGCGTGC CGCG-CATCCCAGA TCCACGGAAGCACCG TERM 94 162607 - 162568 - g 70 -14.2 -2.51133 | overlap 162567 162570 CAGTCAGGCAGCAAT CACCGCGCACCCGCCGAC GAAC ACCGGCGGGTTCGCAACG GCGACTGGGTCAGAC Bphy_7394 162440 - 163636 + | Pectate lyase/Amb allergen Bphy_7395 166341 - 164188 - | general secretion pathway protein D TERM 95 165384 - 165362 - G 83 -14.8 -3.23692 | overlap 165363 GACGAGGACGACGAA CCGCCGAGCG AGC CGCCCGGCAG CGGAGGCTGGCCCGA TERM 96 166119 - 166090 - G 81 -9.3 -4.21194 | gap 1, opp_overlap 166091, overlap 166091 CTGCACCAGCGAAAA GCCCTGCA-TCCGC AAC GCGGACTGCAAGGT CTTCAACGCCTGGTC TERM 97 166118 - 166091 - G 72 -12.8 -3.12395 | gap 1, opp_overlap 166091, overlap 166090 TGCACCAGCGAAAAG CCCTGCA-TCCGC AAC GCGGACTGCAAGG TCTTCAACGCCTGGT Bphy_7397 168996 - 167155 - | TAP domain-containing protein TERM 98 168000 - 168016 + g 75 -4.3 -4.63527 | opp_overlap 168000 168002, overlap 168003 TTGTGAGCCACGCAA GACCGCT CCT GGCGATC TTTTTGACGTCGTCC Bphy_7398 170160 - 169036 - | transposase IS4 family protein Bphy_7399 171646 - 170153 - | RNA-directed DNA polymerase (Reverse transcriptase) TERM 99 174233 - 174218 - H 90 -6.2 -5.18357 | CAACGCACGAAAAAA TTTCCT GTTC AGGAAA CGGAATAGAACTGCT TERM 100 174544 - 174582 + H 100 -19.8 -2.52464 | opp_overlap 174564, overlap 174535 174533 TGTCGGTTGTCGGAT TGGTGTTGCACATCCGAC AAT GTTGGATGTCCAACACCA TGGATTGCCGCGACG Bphy_7406 175679 - 177157 + | aldehyde dehydrogenase Bphy_7407 177246 - 179309 + | trehalose synthase TERM 101 179393 - 179449 + T 71 -12.9 -2.53715 | gap 2, opp_overlap 179391 179390, overlap 179392 TATCCGAAAGAACTG TCGGGCGGCCAGCGCCCGCGCGTCGCG ATTCG CGCGG-GCGCTCGCGATG-CGGCCCGA GTTGCTGCTGCTCGA TERM 102 179845 - 179807 - T 72 -6.7 -4.36914 | gap 2, opp_overlap 179808 TCCGTCCGGAGAAAA TGCGTCCG-ACGAACG-GC GGC GCTCGTATGCACGGACGCA TCGTGACCCGCGTGT TERM 103 180013 - 179977 - T 90 -10.2 -4.61231 | gap 1, opp_overlap 179976, overlap 179980 CTACACGCTCAAAAA CTACGCCGGAGTACTGA GCGA TCCGTACTACGGCG-AG ATCTTCCCGCGCACG TERM 104 180011 - 179980 - T 79 -13 -3.24422 | opp_overlap 179976, overlap 179977 CACGCTCAAAAACTA CGCCGGAGTACTGA GCGA TCCGTACTACGGCG AGATCTTCCCGCGCA TERM 105 181639 - 181650 + T 70 -3.6 -4.56775 | overlap 181638 181646 CGACTTGTGCGTCTC GCGC CGCC GTGC TTTTTGAACGCGCGT Bphy_7413 182250 - 181774 - | hypothetical protein TERM 106 182054 - 181997 - G 78 -12.7 -3.53012 | gap 2, opp_overlap 182051 182052, overlap 181982 181998 CGTGCCGCGTCGAAA GCGGCAC-GCTG-TGGCGGCATGCCGG CATCGC CCGGCTCGCAGCCAGCAGCCATGCCGG TCAGGTGCGGATCGA TERM 107 182053 - 181998 - G 78 -16.2 -2.71712 | gap 2, opp_overlap 182051 182052, overlap 181982 181997 GTGCCGCGTCGAAAG CGGCAC-GCTG-TGGCGGCATGCCGG CATCGC CCGGCTCGCAGCCAGCAGCCATGCCG GTCAGGTGCGGATCG Bphy_7414 183681 - 182293 - | cobyrinic acid ac-diamide synthase TERM 108 182693 - 182658 - G 81 -16.3 -2.62184 | TGCGCTCGTAGACCA TCACGTCGGTGATCC TGAGCC GGATCACCGACGTCA ACTGCCGATCGGGCG TERM 109 183619 - 183648 + g 74 -10.6 -3.72576 | overlap 183620 CAGGCCGCCCAGATT GGCGGCGACGGT CGTCTT ACCGACGCCGCG TTTGGTGGAGACGAA TERM 110 183620 - 183647 + g 73 -14.1 -2.83403 | overlap 183619 AGGCCGCCCAGATTG GCGGCGACGGT CGTCTT ACCGACGCCGC GTTTGGTGGAGACGA Bphy_7415 183990 - 183742 - | hypothetical protein TERM 111 184213 - 184194 - g 100 -4.9 -5.52384 | overlap 184196 GTCTCAGGAAAAAAA TAGCCCG GCAGCT CGGGCTC TCCCTGCGTGCGTAT TERM 112 184211 - 184196 - g 78 -7.5 -4.40552 | overlap 184194 CTCAGGAAAAAAATA GCCCG GCAGCT CGGGC TCTCCCTGCGTGCGT Bphy_7416 184100 - 184549 + | hypothetical protein Bphy_7417 184642 - 184899 + | hypothetical protein TERM 113 185581 - 185597 + G 84 -6.5 -4.80882 | GGCCGTGACTTCGCC TGACGTG GTC CCCGTCA TTTTTGATATCGCGT TERM 114 185910 - 185932 + G 90 -6.3 -5.11033 | gap 2 CCGTTCGTTCGAAGC CGG--GCGACC GCT GGTCGCAGCCG TTTTTTAAGGTTGTG Bphy_7418 185492 - 186448 + | fatty acid desaturase Bphy_7419 186435 - 187673 + | hypothetical protein TERM 115 187709 - 187695 - T 76 -12.8 -3.05844 | opp_overlap 187689 CCGCTCACTCGAACA CGCCCG GCT CGGGCG CCTGCGTGTTGACCA Bphy_7420 188712 - 187777 - | LysR family transcriptional regulator TERM 116 187933 - 187908 - G 72 -6.7 -4.3014 | overlap 187898 ACAGATCGATCAAAA GATCGTGCGCG GGCG CGAGCGCGACC AGTCTGCCGCTGCCG TERM 117 188096 - 188086 - G 72 -3.2 -4.63928 | overlap 188075 188074 ATACGACGCGAAAAA CGCA TCA TGCA GCGCGTCCTTCCGAT TERM 118 188895 - 188879 - R 76 -12.3 -3.37344 | GCTGCACCGAATGAA GATCGGC CAA GCCGATC TCCCCGGCATGAATT TERM 119 189012 - 189024 + r 90 -4.7 -5.42259 | overlap 189011 CGCTCGTTGTGTCAT CGGCG TAC CGACG TTTTTTTACCGCTCG Bphy_7421 190163 - 189402 - | short-chain dehydrogenase/reductase SDR TERM 120 189513 - 189526 + g 75 -3.7 -4.62069 | overlap 189514 TTCTATACGTCCCAC GCGCC CAAG GGCGA TTTTTGACGTGACCC Bphy_7422 191996 - 190683 - | histidinol dehydrogenase TERM 121 191640 - 191658 + g 74 -2.3 -4.82901 | opp_overlap 191637, overlap 191643 CGGCACATAGCACGC CACGCTG TCGAC CGGCATG TTTTTATGACCCAGG TERM 122 192143 - 192155 + H 71 -10.5 -3.59979 | opp_overlap 192141 CGTCTTCGACAATTT GGGGC GCG GCCCC TTTAAAATGGACGCA Bphy_7423 192162 - 193235 + | LacI family transcription regulator Bphy_7425 194452 - 194108 - | hypothetical protein TERM 123 194229 - 194210 - G 95 -12.1 -4.41047 | opp_overlap 194209 AGGGGCCAAGTAAAA CGGGGGC GATGAT GCCCCCG CTGTCGTTTCAGAAC Bphy_7426 195311 - 194454 - | AAA ATPase TERM 124 195458 - 195441 - R 76 -12.7 -3.14602 | opp_overlap 195451, overlap 195439 TTGACGGCATCAAGA CGACGGC GCTG GCCGTCG GCATTGGCGGCCTTG TERM 125 196260 - 196280 + r 77 -13.3 -2.87931 | opp_overlap 196253 CGAGACGATCACGCG CGAGCATCG CGC CGGTGCTCG TGTGTCGGGGCTGGC TERM 126 196770 - 196752 - R 73 -11.6 -3.34715 | overlap 196750 196753 TACGTTCTCCAAAGA TGCGGCGC AAC GCGCCGCG ATTCAGGGGAGAGGC TERM 127 196769 - 196753 - R 81 -15.1 -2.60615 | overlap 196752 196750 ACGTTCTCCAAAGAT GCGGCGC AAC GCGCCGC GATTCAGGGGAGAGG Bphy_7428 197414 - 196836 - | hypothetical protein TERM 128 198884 - 198868 - g 77 -5.1 -4.58943 | TGCATACAAAAAGAA CGACC AGGCGTG GGTCG AGCAAAAGAACGGCG TERM 129 199579 - 199637 + G 91 -20.5 -2.50816 | gap 2, opp_overlap 199594, overlap 199594 CAGCGGCGCCGACGC CG--AAGTGGTGAAGAAGGCTGACGCTGC TAC GCAGCGCCAGCCTTCTTCACCACAAAACG ATTCGTCGGTGACAG TERM 130 199594 - 199620 + G 93 -18 -3.61398 | opp_overlap 199594, overlap 199579 CGAAGTGGTGAAGAA GGCTGACGCTGC TAC GCAGCGCCAGCC TTCTTCACCACAAAA TERM 131 199620 - 199594 - g 100 -20.2 -3.63569 | opp_overlap 199594 199579 CGAAGTGGTGAAGAA GGCTGACGCTGC TAC GCAGCGCCAGCC TTCTTCACCACAAAA Bphy_7430 198068 - 199666 + | integrase catalytic region Bphy_7431 201064 - 200048 - | transposase IS116/IS110/IS902 family protein Bphy_7433 202996 - 201866 - | transposase IS116/IS110/IS902 family protein TERM 132 202677 - 202724 + g 76 -14.2 -3.06796 | gap 1, overlap 202658 GCGCGCAGCGAGCGC ACCAGCTTGATCGCGTCACGGCG GTC CGTCTTGACGCGATCAC-CTGGC TTGCGTGGAATGAGC Bphy_7434 203944 - 203117 - | transposase IS116/IS110/IS902 family protein Bphy_7435 204772 - 204014 - | IstB ATP binding domain-containing protein TERM 133 205418 - 205428 + H 71 -6.8 -4.15044 | overlap 205422 AACGCGCTGCGACGA CTGC CCG GCAG TTTCTTGAACGGCCG TERM 134 205422 - 205444 + H 72 -9.8 -3.65046 | overlap 205418 CGCTGCGACGACTGC CCGGCAGTTT CTT GAACGGCCGG TTGTTCAGCTCCACA Bphy_7437 205680 - 205889 + | hypothetical protein Bphy_7438 206078 - 206530 + | hypothetical protein Bphy_7439 206801 - 208885 + | resolvase domain-containing protein Bphy_7440 210366 - 210163 - | hypothetical protein Bphy_7441 212265 - 210469 - | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 135 211306 - 211265 - G 81 -12.4 -3.85817 | gap 2, opp_overlap 211302, overlap 211266 ACTGGGGTCCAGAAA CCCGCGCTGCGCACCTCAGT ATCG ACTGAGGCGC-CAGC-CTGG AGAGCCAGGTTGATG TERM 136 211826 - 211801 - G 74 -10.3 -3.79251 | opp_overlap 211802, overlap 211802 CAGCCGACCATCAAA CGGGACGGGCG ACAA CGCGCGTCCCT TGTCGACACCTCCCG TERM 137 211802 - 211825 + g 78 -13.8 -3.29511 | opp_overlap 211801 211802 AGCCGACCATCAAAC GGGACGGGCG ACAA CGCGCGTCCC TTGTCGACACCTCCC TERM 138 211825 - 211802 - G 73 -13.8 -2.87229 | opp_overlap 211802, overlap 211801 AGCCGACCATCAAAC GGGACGGGCG ACAA CGCGCGTCCC TTGTCGACACCTCCC Bphy_7442 213133 - 212300 - | hypothetical protein Bphy_7443 214266 - 213130 - | hypothetical protein TERM 139 214302 - 214271 - R 72 -5.8 -4.52589 | gap 1 GCTTTCGACACAAAA GCTACCTCGG-CACC CTT GGTGTCCAATGTGGC GATGATGGCCACTGC Bphy_7444 214693 - 214439 - | hypothetical protein Bphy_7445 215890 - 214775 - | ABC transporter related Bphy_7446 216704 - 215883 - | HAD family hydrolase Bphy_7447 217467 - 216697 - | short-chain dehydrogenase/reductase SDR TERM 140 217128 - 217142 + g 100 -2.1 -5.76237 | gap 1 CGTTCGCATTGATCT CG-AGC GTTC GCTTCG TTTTTTCTTTATCTC Bphy_7448 218411 - 217467 - | cyclic nucleotide-binding protein TERM 141 217686 - 217641 - G 74 -11.7 -3.5764 | opp_overlap 217633 AAGGCCACCGGTAAA GGCGTCCCCTGCACCGGTTGT ATCG ACCGCCTGTACGGGGAACGCC GGCATCCCGAAGGAT TERM 142 217784 - 217798 + g 100 -12.8 -4.46212 | CGAGCAGGGCAGTGG CGGCGC TTC GCGCCG TTTTGTCGTCCACGA Bphy_7449 219268 - 218408 - | binding-protein-dependent transport systems inner membrane component Bphy_7450 220231 - 219281 - | binding-protein-dependent transport systems inner membrane component TERM 143 220298 - 220263 - R 100 -14.1 -3.85698 | gap 1, opp_overlap 220264 220265, overlap 220265 GTCTGTCCTGAGAAA GACCTGCATCGCGGCT TCGCG AGCCACGACGCAGG-C TTTGCATAACTGGAG TERM 144 220264 - 220298 + r 75 -10.6 -3.6682 | opp_overlap 220263 220265, overlap 220265 TCTGTCCTGAGAAAG ACCTGCATCGCGGCTT CGC GAGCCACGACGCAGGC TTTGCATAACTGGAG TERM 145 220265 - 220297 + r 80 -14.1 -2.79878 | opp_overlap 220263 220265, overlap 220264 CTGTCCTGAGAAAGA CCTGCATCGCGGCTT CGC GAGCCACGACGCAGG CTTTGCATAACTGGA TERM 146 220297 - 220265 - R 95 -17.8 -3.51934 | opp_overlap 220265 220264, overlap 220263 CTGTCCTGAGAAAGA CCTGCATCGCGGCT TCGCG AGCCACGACGCAGG CTTTGCATAACTGGA Bphy_7451 221831 - 220332 - | extracellular solute-binding protein TERM 147 221697 - 221644 - G 79 -10.9 -3.89614 | gap 1 CCGAACCCGCAGAAA GCGACAGCACCCGCGACAACGGCCCT GAA AAGGCCG-TATCGCACGCGGCGACGC GCAAGACGTTGACCA TERM 148 222098 - 222076 - H 71 -10.5 -3.54424 | opp_overlap 222075 222073 222070 222076 CCTCATCCCCGGAAA CGCCGGCAC CAGCC GTGCCGCCG ATCTTCCCTTTGTAA Bphy_7452 222132 - 223205 + | LacI family transcription regulator Bphy_7453 224403 - 223642 - | GntR domain-containing protein TERM 149 224887 - 224859 - g 75 -12.4 -3.53012 | gap 1, overlap 224842 224841 GCCGCGGCGCGCAAA GTGCCCGTCGTCG CGCG CGGCG-CGGGCAC GGGGCTGTCGGGCGG TERM 150 225370 - 225360 - g 76 -2.4 -4.88736 | overlap 225361 GACGACGTAGAAAAA GCGG GCG CGGC CGTCGCGCGGATCAT Bphy_7454 224622 - 226121 + | glycolate oxidase, subunit GlcD TERM 151 227162 - 227141 - g 80 -12.3 -3.79043 | gap 1 CAGCATCAACTGAAA CGCCGCCTCG ATC CGAG-CGGCG TGCTGAACCCCGGCC Bphy_7455 226121 - 227197 + | FAD linked oxidase domain-containing protein TERM 152 227719 - 227672 - g 84 -17.7 -2.73468 | overlap 227662 GAAGATTCCGAAGCA CGCCGC-CGTGCCCGCGAAGCCG CGCC CGGCGCCGCGT-CACGCGCGGCG CGTGCTGATGCTCGA Bphy_7456 227211 - 227996 + | hypothetical protein Bphy_7458 229647 - 228640 - | integrase family protein TERM 153 229279 - 229265 - G 75 -7 -4.43844 | overlap 229266 TCACGACTGAGAAAA CCGACC ATT GGGCGG TCGAAGCGTTTCATG Bphy_7459 230590 - 229634 - | integrase family protein Bphy_7460 231843 - 230587 - | integrase family protein Bphy_7461 233563 - 232355 - | putative transposase Bphy_7462 234450 - 233572 - | integrase family protein TERM 154 234653 - 234622 - R 76 -12.4 -3.40522 | opp_overlap 234625, overlap 234625 AGCGGTTTAGTACAA GAGCGCCTATGGAT TCAA ATCCATAGACGTTC GATGACATTGTTGTC TERM 155 234650 - 234625 - R 71 -12.7 -2.56271 | opp_overlap 234625, overlap 234622 GGTTTAGTACAAGAG CGCCTATGGAT TCAA ATCCATAGACG TTCGATGACATTGTT Bphy_7464 236871 - 235360 - | RNA-directed DNA polymerase TERM 156 236576 - 236529 - G 72 -8.4 -4.1891 | gap 1, opp_overlap 236529, overlap 236531 236532 TCTTGGGAATATAAA TAC-GCCGCAGCGGCATCGCA CGATAGC CGCGATGACGCAGCGACAGCA TTCCTTTCCATTTGG TERM 157 236573 - 236531 - G 77 -11.2 -3.6944 | opp_overlap 236529, overlap 236529 236532 TTGGGAATATAAATA CGCCGCAGCGGCATCGCA CGATAGC CGCGATGACGCAGCGACA GCATTCCTTTCCATT TERM 158 238273 - 238257 - R 83 -13.7 -3.34192 | AACGCCCCGAAGGAA GTCCCCC TTG GGGGGAC AGCGCGGTCAGCCGT Bphy_7465 238665 - 238312 - | IS66 Orf2 family protein Bphy_7466 239129 - 238665 - | transposase IS3/IS911 family protein TERM 159 239124 - 239171 + g 70 -11.3 -3.31144 | overlap 239125 GGTCAAATCATCGTC AGTCATGGATTGCGTCCGCAA GTTGGG TTGCGGACGCAATCGTGGACC TTCTCAAACTCGAAC TERM 160 239125 - 239170 + g 74 -14.8 -2.58544 | overlap 239124 GTCAAATCATCGTCA GTCATGGATTGCGTCCGCAA GTTGGG TTGCGGACGCAATCGTGGAC CTTCTCAAACTCGAA TERM 161 239952 - 239970 + H 78 -8.8 -4.19238 | overlap 239954 CTTCCGCAGTAACGC GTTCGTGC CAT GCACGATC TTTTGAGATTGAACA TERM 162 239954 - 239968 + H 75 -10 -3.69618 | overlap 239952 TCCGCAGTAACGCGT TCGTGC CAT GCACGA TCTTTTGAGATTGAA Bphy_7471 241112 - 242344 + | glutamine amidotransferase class-II Bphy_7474 244327 - 244761 + | dehydratase TERM 163 245971 - 245995 + G 86 -9.3 -4.57073 | opp_overlap 245976 GGCGAGGCCGCCGGA CATCATGGAGA GCT TCTCCAAGGTG TTTTTGAAGACGATA Bphy_7478 245830 - 246816 + | GHMP kinase TERM 164 248205 - 248191 - g 75 -3.4 -4.82901 | GTGCTTCGAGAAAAA GCCGCG ATG CCCGAC TGGGCGGGGCCGGAC Bphy_7479 246835 - 248478 + | pyridoxal-5'-phosphate-dependent protein beta subunit TERM 165 248498 - 248513 + F 70 -4.6 -4.45068 | CATTTTCTGCAACCG GCTTCC GACT GGACGC TTTCTTGTTGCAGGT TERM 166 250550 - 250568 + G 70 -2.5 -4.65933 | gap 1 AGGTCGATTGGTGAG TTTCTACG TGAT CG-AGAAA TTTCTTTTGACAATG Bphy_7481 250052 - 250774 + | GntR family transcriptional regulator Bphy_7482 251634 - 251059 - | integrase catalytic region TERM 167 251610 - 251635 + g 70 -6.1 -4.25104 | opp_overlap 251612 251616 GTCTTCGTACGAGTA CATGAACTACC TCCA GGTAGTCCAAG TTTTCGTCCGCACCC Bphy_7485 254888 - 254004 - | hypothetical protein Bphy_7486 256529 - 255306 - | transposase IS204/IS1001/IS1096/IS1165 family protein TERM 168 256992 - 256975 - R 72 -9.1 -3.87994 | opp_overlap 256990 256991, overlap 256953 256952 ATCGACTTCGATAAA GCCGCGA TCCG TCACGGC GACGCGCGCCTTGTC TERM 169 260174 - 260206 + r 100 -19.2 -2.89039 | overlap 260166 260163 TCTCGTTGTCTCGCA GGGCTGGTTGCAGC ATTCC GCCGCAACCAGCCC TCTCTCAGCCTGCTT Bphy_7490 262213 - 260438 - | acetolactate synthase, large subunit, biosynthetic type TERM 170 261431 - 261419 - G 71 -10.5 -3.60792 | GTCCGAAGCGGGAAA GGCGC CAA GCGCC ATCAACGTGTTCGTC TERM 171 261729 - 261716 - G 71 -3.7 -4.52589 | opp_overlap 261718, overlap 261717 261718 GCGGGCGATATAAAA CGCGC TTTT GAGCG TCTTCGCGAGTTGCG Bphy_7491 264951 - 262237 - | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type Bphy_7493 267238 - 266087 - | porin TERM 172 267675 - 267659 - R 75 -3.7 -4.83169 | ATTTCTTGACAAAAA TTGCG CCCCCAT CGCAA CCTCATCTACATATT Bphy_7494 268507 - 267740 - | extracellular solute-binding protein TERM 173 267933 - 267921 - G 75 -4.1 -4.63218 | opp_overlap 267921 267931 CCTGGTCCAACAAAA GCAAA CCC CTTGC CTTCTGGCGTTTTCA Bphy_7495 269507 - 268749 - | hypothetical protein Bphy_7496 271042 - 269633 - | MmgE/PrpD family protein TERM 174 270585 - 270611 + g 81 -12.2 -3.89614 | TGGCCATGTTCGGCC GGTTGCCCGTGG CTG CCACGCGCGGCC TTTATGCGGGTTCCG TERM 175 271273 - 271248 - R 86 -8.9 -4.56775 | AGCCTGGGCGAAAAA TGCGACCGGTA ATGG TGCCGGGCGCA GTCGAGACAACCGGC Bphy_7497 271810 - 271301 - | AsnC family transcriptional regulator Bphy_7498 273100 - 271913 - | pyridoxal-5'-phosphate-dependent protein beta subunit Bphy_7499 274128 - 273094 - | succinylglutamate desuccinylase/aspartoacylase TERM 176 273169 - 273150 - G 72 -2.8 -4.6902 | gap 1 GGAGAAGGCCAAAAA GGC-AATCG CCA CGGTTCGCC AGTGCGGGGTGCCGC TERM 177 273972 - 273991 + g 85 -7.8 -4.59109 | gap 1, opp_overlap 273930 273969, overlap 273971 TCCCGGCAATGAGTA CGGCGGTCG GAC CG-TCGCCG TTTTTAAGGCATATC Bphy_7500 275347 - 274151 - | peptidase M24 Bphy_7501 276291 - 275470 - | ABC transporter related TERM 178 275748 - 275766 + g 70 -8.1 -3.96068 | gap 1, overlap 275747 GGTCCATCGCGAGTG CGCG-CGC GATC GCGACGCG TTGTTGTTGCCCTCC Bphy_7502 277027 - 276317 - | polar amino acid ABC transporter, inner membrane subunit Bphy_7504 278662 - 277892 - | extracellular solute-binding protein TERM 179 278087 - 278070 - G 83 -9.1 -4.36914 | CTGTCGCCGACAAAA GCGTAGC CCGC GCCACGC GGCGTCTGCAGAAAG Bphy_7505 279034 - 279729 + | GntR family transcriptional regulator TERM 180 280015 - 280025 + F 71 -8.2 -4.05033 | GGGCTTCGACCAAGG CCGG GTA CCGG TTTCTGTCCAATGAC Bphy_7507 281348 - 281716 + | putative transposase Bphy_7509 283693 - 282686 - | transketolase central region TERM 181 283094 - 283142 + g 71 -7.5 -4.17048 | overlap 283108 CGCTTCGCCGAACGG GATCGTGTACGCAC-CGTCGGGC ACGTC GCCCGTCGTGT-CGTACAGCATC TTGTTTTCGAGGAAG TERM 182 283478 - 283423 - G 75 -15.2 -2.77701 | gap 1, overlap 283418 283420 AGTCGACGAACATCA GCTCGGCGA-TCGGCCGCAGGCCCGTC AGC GCCGCGCCGGCGGCCGCGCCGACGAAC GCGGCCTCGCTGATC Bphy_7510 284683 - 283706 - | dehydrogenase E1 component TERM 183 283877 - 283907 + g 72 -3.3 -4.63932 | overlap 283879 CCGGCGGAAATTGGC G-AGGCAATCGCGCT CCT GGCGC-ATGGCCTTC TTTTCTTCGACGGTG TERM 184 283879 - 283904 + g 73 -6.1 -4.43307 | gap 1, overlap 283877 GGCGGAAATTGGCGA GGCAATCGCGCT CCT GGCGC-ATGGCC TTCTTTTCTTCGACG TERM 185 285900 - 285932 + H 79 -12.8 -3.25823 | TCGGCAACTCGTCGC TATCGTCGATCGTC CGGAT GACGTTCGACGGTA TTGGTGTCGCGGCGA TERM 186 286183 - 286163 - H 100 -7.5 -5.76633 | opp_overlap 286181 GCACACAGAAAAAAA CCGAGACTC AGT GAGTGCCGG CTTGCCGTCATCGTC TERM 187 287129 - 287117 - H 70 -4.8 -4.44548 | overlap 287111 CACACCGAACGAAAA CGTC ACACA GACG ACGATCTCGAGAATC TERM 188 287949 - 287929 - H 90 -10.5 -4.65895 | opp_overlap 287929, overlap 287939 TGCTGGAGCGAAAAA TTCCGAACC AGC GATTCGGAA TTTGCCCTGGACGCC Bphy_7514 288624 - 289091 + | hypothetical protein TERM 189 289354 - 289324 - g 80 -8.3 -4.4017 | gap 1 CGAAGTTGCACAAAA CGCGAGT-CGACGC CTGC GAATCGCACTCGCG GAAGAGACCCGTCGC TERM 190 289999 - 290054 + G 73 -12 -3.36671 | opp_overlap 289999 TGTACAAGCCCGAAA TGGCTGG-CAGCGCATCCTCAAGCGG TGCGCT CCGATTGAGGGT-CGCTGACTCGCCA TTGTCAGCTTCAGGT Bphy_7515 289148 - 290047 + | hypothetical protein TERM 191 290316 - 290305 - T 79 -7.2 -4.57073 | GACCTTGCGGAAAAA CGCG TCGT CGCG CTCCCGCTGTGCATC Bphy_7516 291614 - 290373 - | hypothetical protein Bphy_7517 292017 - 291622 - | hypothetical protein Bphy_7518 292632 - 292303 - | killer protein, putative Bphy_7519 293092 - 292643 - | hypothetical protein Bphy_7520 293802 - 293092 - | hypothetical protein TERM 192 293353 - 293340 - G 81 -3.1 -5.09895 | gap 1, overlap 293341 293342 GATCCATCGAAAAAA CGTCGC TGC GCGA-G TGGAACTCGAACAGC Bphy_7521 295441 - 293873 - | hypothetical protein TERM 193 294414 - 294448 + g 75 -4.1 -4.59773 | gap 1, overlap 294415 CCCTGCACGTCGAAC TGCCGCTGCTGGGACG TGAC CGTCCT-GCTGCCGCC TTTTTCGAGCTCGAC TERM 194 295300 - 295330 + g 84 -14.6 -3.33696 | TGTCGACGGGCGTTT CCGGATGGCGCGGT ACG GCCGCGGCTTCCGG TTCGTTCGCCGGCGG Bphy_7522 297243 - 295438 - | TRAG family protein TERM 195 297390 - 297380 - R 71 -6.8 -4.12188 | GCAGCACTGGCAAAA CGGT CAT ACCG GGCCGCGTTGGCATA Bphy_7523 297814 - 297431 - | hypothetical protein TERM 196 298387 - 298366 - R 72 -6.5 -4.36595 | gap 1, opp_overlap 298376, overlap 298368 GACTGAAACGCAAAA GACGTAGCGC AGA GCGCT-CGGC CTCGTCGAGCTCGCC TERM 197 298466 - 298445 - R 76 -13.7 -2.78596 | overlap 298447 GATTGCCGCACCATA GAGCCGTGC AAGC GCACGGCCC TCCCTGCTCGCCGCG TERM 198 298464 - 298447 - R 74 -12.7 -2.94099 | overlap 298445 TTGCCGCACCATAGA GCCGTGC AAGC GCACGGC CCTCCCTGCTCGCCG Bphy_7524 298954 - 298721 - | hypothetical protein Bphy_7525 299205 - 298951 - | hypothetical protein Bphy_7526 300239 - 299202 - | P-type DNA transfer ATPase VirB11 Bphy_7527 300764 - 300255 - | hypothetical protein TERM 199 300554 - 300529 - G 71 -7.4 -4.15222 | overlap 300515 AGCGCGGGGAATAAA CCCGCCCCGG CACGGC CCGGTGCTGG AAGGATGGTTGTTGC Bphy_7528 302131 - 300770 - | conjugation TrbI family protein Bphy_7529 303066 - 302149 - | conjugal transfer protein TrbG/VirB9/CagX Bphy_7530 303914 - 303063 - | VirB8 family protein Bphy_7531 305138 - 304224 - | TrbL/VirB6 plasmid conjugal transfer protein Bphy_7532 305410 - 305162 - | hypothetical protein Bphy_7533 306077 - 305400 - | type IV secretion system family protein Bphy_7534 308663 - 306090 - | CagE TrbE VirB component of type IV transporter system TERM 200 306209 - 306242 + g 84 -13.1 -3.75153 | gap 1 CCCACAGCCGCTCAT CGGCGC-CGTGCTTCG CCG CGAGGCGCGTGCGCAG TTTGCGTTCGAAGAC TERM 201 306852 - 306894 + g 73 -12.1 -3.39668 | opp_overlap 306822 306889, overlap 306882 CTCCGTCATGTTCAG CGCCAGGTTC-GGCGGGTTGT CGA ACA-CCCACCAGAACCTGCCG TTCTCGGATTTGCAC TERM 202 307985 - 307968 - G 71 -10.5 -3.66844 | opp_overlap 307967 307983 GCGACAGGTGAAGAA GCGCCGG TGGT CCGGCAC GCCCGGCCCGTCGAT TERM 203 308423 - 308405 - G 86 -10.2 -4.25104 | overlap 308420 308421 GCCGTCGCATGAAAA CGCCGTGG TAA CCAAGGCG CCCGCCATGGTCGCG Bphy_7535 309100 - 308663 - | type IV secretory pathway VirB3 family protein Bphy_7536 309460 - 309110 - | hypothetical protein Bphy_7537 310157 - 309504 - | lytic transglycosylase catalytic Bphy_7538 310433 - 310852 + | XRE family transcriptional regulator Bphy_7539 311822 - 310872 - | PAS sensor protein Bphy_7540 312252 - 311875 - | hypothetical protein TERM 204 312558 - 312575 + H 78 -8.3 -4.4891 | CACCGCCGGGCTGTT CGCCGGC TATG GCCGCCG TTTTCTGCTCCTCGG Bphy_7542 313425 - 313718 + | hypothetical protein TERM 205 313858 - 313874 + G 100 -9.5 -5.14477 | CAGTTCAGAAGCCGG TGCATCA AGC TGATGCA TTTTTTAGGTCTATC TERM 206 313951 - 313936 - g 100 -10.4 -4.86731 | TTTGCGCAAAGAAAA CGGGCT TTCG AGCCCG CGCAACGGTGAGCGC Bphy_7543 313699 - 313962 + | hypothetical protein TERM 207 314280 - 314265 - f 86 -9 -4.5954 | TCATATTACAGAAAA CGTAGC ATTT GCTACG CGCCGATCCTTTTAG TERM 208 314613 - 314641 + F 100 -20.5 -3.09208 | opp_overlap 314616, overlap 314616 ACGACTGGCCTTCAA GAAGTGTACGGCA AAA TGCCGTACACTTC TTGCGTCCCTAGTTT TERM 209 314616 - 314638 + F 100 -16.4 -3.68569 | opp_overlap 314616, overlap 314613 ACTGGCCTTCAAGAA GTGTACGGCA AAA TGCCGTACAC TTCTTGCGTCCCTAG TERM 210 314638 - 314616 - f 90 -16.4 -3.61517 | opp_overlap 314616 314613 ACTGGCCTTCAAGAA GTGTACGGCA AAA TGCCGTACAC TTCTTGCGTCCCTAG TERM 211 314722 - 314764 + G 75 -9.6 -4.04174 | overlap 314717 CCGAGACGCGCGAGT TACTACGGCGTGCGGCCGAG CTG CAAGGCCGCTCGCTGTCGGA TTTCGTTGTGTCCGC Bphy_7544 314667 - 314951 + | hypothetical protein TERM 212 315329 - 315358 + G 73 -6.3 -4.38712 | GCTCGTGCACTGCTC GTCGACGCCAGCT CGGA GGCTGCTGCCGAC TTTTATCGCCATCAC Bphy_7545 314948 - 315454 + | GCN5-related N-acetyltransferase Bphy_7546 316337 - 315951 - | hypothetical protein Bphy_7547 316985 - 316497 - | hypothetical protein Bphy_7548 318411 - 317434 - | parB-like partition protein TERM 213 318134 - 318105 - G 71 -12.1 -3.18681 | gap 1 CCCCAACCCGACGAA CCGTGA-CGGCCTG CAG CAGGCCGGCCTCGG CAATCGAGCGGGCCA TERM 214 318305 - 318321 + g 76 -9.3 -4.14257 | overlap 318306 ATGCCAGGCATGGTT TGCGGCC CCC GGCCGCC TTTGTCCTTCTTGCC TERM 215 318306 - 318320 + g 72 -12.8 -3.07831 | overlap 318305 TGCCAGGCATGGTTT GCGGCC CCC GGCCGC CTTTGTCCTTCTTGC Bphy_7549 319619 - 318408 - | cobyrinic acid ac-diamide synthase TERM 216 319793 - 319777 - H 70 -12.3 -2.71731 | opp_overlap 319776 319779 319788, overlap 319779 CGGATGGCTTAAGTA CATGCGC GAA GCGCATG ATTGCATCCGGTTTG TERM 217 319858 - 319872 + H 73 -3.4 -4.82901 | opp_overlap 319859, overlap 319859 319864 TCATCCGCACAAAAA ACGCCC CGG GGGTGG TTTTTGTGAAACCCC TERM 218 319871 - 319859 - H 86 -4.7 -5.252 | opp_overlap 319859 319858 319864 CATCCGCACAAAAAA CGCCC CGG GGGTG GTTTTTGTGAAACCC TERM 219 320198 - 320211 + H 77 -2.3 -5.0916 | overlap 320195 GCGCGGTTTGCGGCG CTGTC CCGG GGCGG TTTTTGTGTTGACAG TERM 220 321385 - 321364 - g 70 -8 -4.00868 | overlap 321365 CTACCCAGAAGGAAA TCCGCAGC CGGACC GCTGCAGA AGCCCAGCTGCAGGC Bphy_7550 320274 - 321680 + | hypothetical protein TERM 221 321672 - 321657 - T 85 -3.2 -5.46698 | overlap 321658 GCGAAAATGAAAAAA CTCCTG CCAC CAGGAC AGTCCTGACTTCGAG Bphy_7551 322560 - 321904 - | hypothetical protein Bphy_7553 323575 - 323264 - | hypothetical protein Bphy_7554 323870 - 323592 - | hypothetical protein Bphy_7555 324422 - 324195 - | hypothetical protein Bphy_7556 324982 - 324674 - | hypothetical protein Bphy_7557 325853 - 325029 - | hypothetical protein TERM 222 325897 - 325878 - R 76 -12.8 -3.06483 | overlap 325871 CACTGAAAGGAGAGA CCCCGACC GGCC GGCCGGGG CGATGTATCAGTCGA Bphy_7558 326318 - 325905 - | antirestriction protein TERM 223 326148 - 326133 - G 74 -4.6 -4.52857 | overlap 326134 326135 AGGGGCCATATAAAA GCCGCC GTTG GACAGC GTGAAGAAGTGCCAT TERM 224 326435 - 326452 + r 86 -3.5 -5.60689 | overlap 326437 TTTTTCTAAGCCTAT TTTCTAT TGAT ATAGAGA TTTTTTATTCTGTAA TERM 225 326557 - 326546 - R 70 -3.6 -4.67256 | GAAGAAAGCAGAAAA CCGA TCAG CCGG AATAAGTGGCACCGA Bphy_7560 327565 - 326969 - | hypothetical protein TERM 226 327610 - 327569 - H 79 -5.3 -4.74706 | gap 1, opp_overlap 327579, overlap 327571 327584 CTCAATAGTCAAAAA TGCGTGGTAACTGAAGCTTT ATC AAAGCTTCAGTTATG-CGAA TTGATGCTTGAACGG TERM 227 327579 - 327601 + H 83 -13.6 -3.33737 | opp_overlap 327571 327569 327584 AAAAATGCGTGGTAA CTGAAGCTTT ATC AAAGCTTCAG TTATGCGAATTGATG TERM 228 327739 - 327727 - H 71 -10.5 -3.53563 | opp_overlap 327726 327727, overlap 327715 ATATCGCGTGCCAAA GGGGC GAG GCCCC CTTTGCAACCCCGAC Bphy_7561 327846 - 328103 + | hypothetical protein Bphy_7562 328106 - 328471 + | mobilisation protein Bphy_7563 328472 - 328720 + | hypothetical protein Bphy_7564 328724 - 331783 + | relaxase/mobilization nuclease family protein Bphy_7565 331918 - 333048 + | transposase IS116/IS110/IS902 family protein Bphy_7566 333418 - 333969 + | hypothetical protein Bphy_7567 334039 - 335280 + | cystathionine gamma-synthase Bphy_7568 335656 - 335955 + | hypothetical protein TERM 229 336522 - 336540 + F 79 -5.2 -4.77438 | CATTTACTCCATTTC CCGCGT TATCGCT GCGCGG TTTTTAATCGTAAGT TERM 230 336908 - 336895 - g 78 -8.1 -4.4261 | CGCCGAATATGAAAA GCTCG TTAG CGAGC CGGACGAGAAAACCG TERM 231 338264 - 338216 - g 81 -13.8 -3.53811 | gap 2, overlap 338255 GGGACGCCTGCGAAA CCGCTGCAGGTGCC-TCGCGG-GC ACG GCACCGCGACGGAACCGGCCGCAG CCCGCTCAGCTTACG Bphy_7569 336581 - 338311 + | methyl-accepting chemotaxis sensory transducer TERM 232 338527 - 338500 - f 87 -17.8 -2.53392 | opp_overlap 338492 338490, overlap 338505 AAATTTTTCAATCCA GCGAATCGCCCG AGAC CGAGCGATTCGC AAGTGGACATTTTTA Bphy_7570 338779 - 339111 + | hypothetical protein Bphy_7572 339715 - 340077 + | MarR family transcriptional regulator TERM 233 340372 - 340358 - T 74 -11.4 -3.54475 | TGCGCCAGTACACAA TGGCCG AGC CGGCCA TCAAACGGTACGCAT Bphy_7573 340635 - 340417 - | hypothetical protein Bphy_7574 340952 - 340635 - | hypothetical protein Bphy_7575 341270 - 340992 - | hypothetical protein TERM 234 341752 - 341762 + G 70 -4.6 -4.36914 | overlap 341738 TCGCGCCGGCACGTG CGGC AGC GTCG TTTTCTGGGCGCAGC Bphy_7576 341330 - 342085 + | hypothetical protein Bphy_7577 342133 - 343095 + | hypothetical protein Bphy_7578 343557 - 343198 - | diacylglycerol kinase Bphy_7579 344132 - 343854 - | hypothetical protein Bphy_7580 344596 - 345099 + | hypothetical protein Bphy_7581 345107 - 345526 + | hypothetical protein TERM 235 345506 - 345528 + T 72 -9 -3.90112 | opp_overlap 345502, overlap 345507 GGCGAACTCAAGGGC AGCGAGGCGC GCA GCGCCTAGCG TTTCATTCCGACGGC TERM 236 345507 - 345527 + T 74 -12.5 -2.93853 | opp_overlap 345502, overlap 345506 GCGAACTCAAGGGCA GCGAGGCGC GCA GCGCCTAGC GTTTCATTCCGACGG Bphy_7582 347478 - 345523 - | DNA ligase D TERM 237 345731 - 345750 + g 73 -9.3 -3.92324 | opp_overlap 345730 345731, overlap 345734 GCCCGTACCGAAAAG GGCGCAA CGGTGC TTGCGCC TTTGCTGTTGCGAAG Bphy_7583 347779 - 347480 - | hypothetical protein Bphy_7584 348317 - 347757 - | hypothetical protein TERM 238 348046 - 348061 + g 70 -6 -4.26903 | opp_overlap 348031, overlap 348047 CCGGGCGGGGGAGGC ACGGCG ATGG CGCCGG TTTTGATCAGATGGA TERM 239 348384 - 348354 - R 77 -12.4 -3.53012 | GTCTGCCCCGGCAAA GTGGTGGGGGCACG CTG CGTGCGCCCGCCGC GCGATGAGCGGCAAA Bphy_7585 350005 - 348410 - | diguanylate cyclase with PAS/PAC sensor TERM 240 349425 - 349404 - G 74 -11.6 -3.62775 | overlap 349417 349421 ACGAGTCCCGAATAA TGGCGTCG GACAAT CGACGCCA TTGCAACGACGTACG TERM 241 350381 - 350394 + r 77 -2.4 -5.06414 | opp_overlap 350383 CCTGCCGGGACATAC TACC CGTGAC GGTA TTTTTCTTCAGCAGG Bphy_7587 353177 - 350556 - | SMC domain-containing protein TERM 242 350919 - 350929 + g 77 -5.4 -4.64334 | overlap 350915 CAACTGCACGATCGC TTCG TTG CGAA TTTTATTGAGCGCTT TERM 243 351468 - 351480 + g 83 -2.6 -5.1963 | opp_overlap 351436 TTTCAGCTCCTGGTC CGCG AGTTC CGTG TTTTTCTTGGTTAGC Bphy_7588 359959 - 353345 - | DNA helicase related protein TERM 244 362114 - 362126 + G 73 -9.1 -3.88291 | GCTCGTCGAAGCCGA GTCCG ATC CGGAC TTTCTCGCGATGCTG Bphy_7589 361035 - 362291 + | metallophosphoesterase TERM 245 362364 - 362374 + G 70 -5.4 -4.40173 | GTGGCGTTTCCCCGC TCGT CGC ACGA TTTTCACTTTCTCGT TERM 246 363151 - 363135 - g 78 -7.9 -4.36914 | GGCGCGTTGAGAAAA CTGGCGG CAG CCGACAG CGCGCTCGAGGTGCA TERM 247 365252 - 365241 - g 79 -7.2 -4.49389 | opp_overlap 365250, overlap 365242 ATTGCAGAAGCAAAA CGCC AGGA GGCG CTCGCCGCCATGGCC Bphy_7590 362295 - 365756 + | hypothetical protein TERM 248 366308 - 366323 + T 71 -8.2 -4.02132 | opp_overlap 366308 CGTAAAGTATCAGAA CCCTGC TTCG GCGGGG TTTATGCATTTAGCG TERM 249 366485 - 366456 - T 75 -10.7 -3.64703 | overlap 366440 GCTGCCTGATGCAAA CGCGAGCACCTTG TCGC CAAGGCATTCGCG GCCGGCCCGTGGGCG Bphy_7591 367297 - 366848 - | nuclear protein SET TERM 250 367006 - 366974 - G 70 -7.7 -3.97368 | overlap 366976 GCCGTAATCGATAAA GAGCTCATCGCCA GGCTGAA TGTCGATGAGCGC ATGGATAAAGACGCG Bphy_7592 367562 - 367738 + | DNA-binding protein HU-alpha Bphy_7593 368802 - 367807 - | integrase family protein Bphy_7594 369724 - 368795 - | integrase family protein Bphy_7595 370962 - 369721 - | integrase family protein TERM 251 371224 - 371206 - R 75 -5.9 -4.57073 | opp_overlap 371193, overlap 371193 TACCTGCGGCAAAAA CCGTCAG GTTCA CTGCCGG GAAAGGGTTCAAGGA TERM 252 371304 - 371329 + r 100 -10.4 -5.00616 | opp_overlap 371303 CTGCGTGTAGTAGAC GCCCGCCATC AGATCG GATGGGGGGC TTTTTTGGCAGGCGC Bphy_7597 371651 - 371382 - | hypothetical protein Bphy_7598 372050 - 371754 - | addiction module antitoxin Bphy_7599 372505 - 372047 - | hypothetical protein Bphy_7600 372812 - 372507 - | hypothetical protein TERM 253 373485 - 373471 - H 71 -11.4 -3.23984 | GAAATCCAGCAGGAA GCGCAG CCG CTGCGC GGCGGGGACCGTCCA TERM 254 374093 - 374107 + G 74 -12.8 -3.25823 | opp_overlap 374092 TTGACCGCGACACAC CCGGCG CGA CGCCGG TTAGTATCACCACCC TERM 255 374499 - 374514 + G 70 -4.6 -4.431 | overlap 374501 TGCCAGGCGTCGTAT GGGCAC CATG GTGCGC TTTTATCGCTGGATG TERM 256 374546 - 374574 + G 77 -14.7 -2.90456 | opp_overlap 374542, overlap 374539 374535 TGACCGAAGCAGGCT TTCGACCCACG AACGCGC CGTGGGTCGAA TCTGATCGTTTCATT Bphy_7602 374029 - 375477 + | integrase family protein Bphy_7603 375474 - 376325 + | hypothetical protein Bphy_7604 376291 - 377352 + | hypothetical protein Bphy_7605 377349 - 379244 + | hypothetical protein Bphy_7606 379241 - 379603 + | hypothetical protein Bphy_7607 380585 - 379839 - | phage integrase family protein Bphy_7609 383512 - 381440 - | resolvase domain-containing protein TERM 257 381660 - 381678 + g 74 -10.4 -3.73775 | overlap 381656 381659 AGTTCGTCCGGCCGC TTGAAGCA GGT TGCTTCAA TTTCATACCGGTAAC Bphy_7610 383981 - 383649 - | hypothetical protein Bphy_7611 384330 - 384034 - | hypothetical protein TERM 258 385765 - 385723 - H 87 -15.6 -3.37464 | gap 1, opp_overlap 385725, overlap 385724 385746 TGAGCAACTGGAGAA GCCCT-CCTCGCCCCGGCG CGAAAT CGCCGGAGCAAGGTAGGTC CTATAACCGGCGAAC TERM 259 385763 - 385724 - H 85 -17.1 -2.62157 | opp_overlap 385725, overlap 385723 385746 GAGCAACTGGAGAAG CCCTCCTCGCCCCGGCG CGAAAT CGCCGGAGCAAGGTAGG TCCTATAACCGGCGA TERM 260 386222 - 386200 - H 75 -9 -4.02719 | opp_overlap 386198 386194 386203 GCAGGAAATACCAAA GGACGGGGGC AAA GTCCGCGTCC TGTCGATTCCTGCTA TERM 261 387570 - 387560 - H 76 -3.2 -5.00884 | ATCGCGGTCAAAAAA CCGT CGC ACGA GCGTTCACCTTGCCT Bphy_7615 388407 - 388886 + | transposase IS3/IS911 family protein Bphy_7616 388886 - 389239 + | IS66 Orf2 family protein Bphy_7618 392302 - 391094 - | putative transposase Bphy_7619 393189 - 392311 - | integrase family protein Bphy_7620 394484 - 393453 - | integrase family protein Bphy_7621 395458 - 394481 - | integrase family protein Bphy_7622 396672 - 395455 - | integrase family protein Bphy_7623 397309 - 396725 - | IstB ATP binding domain-containing protein Bphy_7625 398205 - 398414 + | hypothetical protein Bphy_7626 398603 - 399055 + | hypothetical protein Bphy_7627 399076 - 399336 + | hypothetical protein Bphy_7628 399326 - 401410 + | resolvase domain-containing protein TERM 262 402161 - 402205 + F 76 -13.7 -2.82519 | gap 3, opp_overlap 402186 402187, overlap 402156 402158 CATGTTCATCCGGTG CGCGGGC-ATCGTCTCTCCGGC CAAA GCCGGCGAG-C-ATAGCCCGCG TGGTTGATGTCATGC TERM 263 402822 - 402845 + F 81 -12.4 -3.66803 | opp_overlap 402818 TTTGCTACGAAGGGT CCCGCTGATG GCAG CACCAGCGGG TTTCGGCTCTTCCGC Bphy_7630 403123 - 404058 + | transposase IS116/IS110/IS902 family protein Bphy_7633 406021 - 407094 + | D-alanine--D-alanine ligase TERM 264 408376 - 408397 + G 78 -4.5 -4.72272 | overlap 408378 AGCAAGGTCGGCAAT TTTAATTGC AGTG GCAATTGGA TTTTTGCTCACCGCA Bphy_7634 407423 - 408811 + | multi anti extrusion protein MatE TERM 265 411358 - 411374 + G 75 -3.5 -4.83169 | GGCCCTATCCCTGCT CCCCGGC TCA GACGTGG TTTTTCTCCCAGCGT TERM 266 412703 - 412690 - g 93 -3.7 -5.24129 | overlap 412691 CGCCCGCACAAAAAA CCGGC AGAC GCCGC GCGTACGGAAATGTG Bphy_7636 409524 - 413858 + | AMP-dependent synthetase and ligase Bphy_7637 413874 - 414629 + | short-chain dehydrogenase/reductase SDR Bphy_7639 415668 - 415072 - | plasmid pRiA4b ORF-3 family protein TERM 267 415247 - 415302 + g 73 -9.2 -3.89881 | gap 3, overlap 415287 TCTTCCGGCGGACAT GCATTC-TGCCC-ATCCAGGCATAGCG GCCGG CGC-ATGTCCGGGTCGGGCACGAGTGC TTTCTCGACCTTGAT Bphy_7644 419299 - 420885 + | extracellular solute-binding protein Bphy_7645 420896 - 421966 + | binding-protein-dependent transport systems inner membrane component Bphy_7646 422025 - 422939 + | binding-protein-dependent transport systems inner membrane component TERM 268 423730 - 423745 + G 71 -11.8 -3.28712 | ACCCGTGGTCTGCTT GCGGCG AACC CGCCGC TTGTCGACCCGCCCC Bphy_7647 422941 - 423816 + | ABC transporter related Bphy_7648 423813 - 424571 + | ABC transporter related Bphy_7649 424753 - 426249 + | MlrC domain-containing protein TERM 269 427519 - 427504 - g 73 -6 -4.4017 | overlap 427493 427505 GGAAGCCGGAGAAAA CGCACG TCCT CGGGCG CGCAATCAGCTATCA Bphy_7651 427104 - 428459 + | aminotransferase class-III TERM 270 428470 - 428493 + F 100 -14.6 -3.9281 | gap 1 CCTGATTGCTGGATT GGCCGTCGTCG TAC CG-CGACGGCC TTCTTTCCACGTCCT TERM 271 428560 - 428550 - f 75 -5.4 -4.65895 | TTCGCTACGGAAAAA GTTC GTG GAAC CGCTCTTCAATTTCA TERM 272 428806 - 428784 - g 78 -13.5 -3.46509 | overlap 428778 CGGGAAGAAGATCAA CCTCGTCGT GCGCG ACGACGAGG GGAAGCCTGCGGTGG Bphy_7652 428554 - 429423 + | ABC-type branched-chain amino acid transport systems periplasmic component-like protein Bphy_7653 430361 - 429435 - | putative transposase TERM 273 431980 - 432002 + G 78 -4.2 -4.77165 | gap 1 CGCAACTGCTTCTTG CGCGTC-AT CCCGAC ATCGACGCG TTTTGTTGTGCCGAC Bphy_7655 431280 - 432278 + | LacI family transcription regulator Bphy_7657 432983 - 433807 + | inositol monophosphatase TERM 274 434678 - 434657 - T 76 -12.9 -3.03771 | TTAGATTTCGCAAGA GCGGCGGCG CTTG CGCCGCGGC CGGCAAGTCCGGGAC TERM 275 435634 - 435683 + T 76 -12.1 -3.33492 | gap 1, overlap 435636 GTCATCGTTCGTTTC GTCTTG-CGTGGCTGGTTGCAGCA TTC TGCCGCAACCAGCCACGACTCAGC TTATCGAATCAGTGC TERM 276 435636 - 435682 + T 81 -15.3 -2.59881 | gap 2, overlap 435634 CATCGTTCGTTTCGT CT-TG-CGTGGCTGGTTGCAGCA TTC TGCCGCAACCAGCCACGACTCAG CTTATCGAATCAGTG Bphy_7662 436894 - 436055 - | IstB ATP binding domain-containing protein Bphy_7663 437937 - 436891 - | integrase catalytic region TERM 277 436965 - 436989 + g 84 -13.5 -3.79043 | ACGGCTTATTCCACT CCGATGTCGCG TAC CGCGACGCCGG TTTCGGTTGCTGATG TERM 278 440030 - 440015 - H 71 -10.4 -3.54424 | opp_overlap 439991 GCGCAGGCGCTCAAA CCGGCT CTTG AGCCGG TAGGCGGTGCGTACG TERM 279 441091 - 441117 + H 100 -15.3 -5.74684 | opp_overlap 441075 441084 441085, overlap 441076 CGGCATAACGGGTAA TGCCGTTCAGT TAAGC ACTGAACGGCA TTTTTGTTTTTGTTC TERM 280 441241 - 441222 - g 71 -12.8 -3.04144 | GCTCGATGCGCAACA GCCGGCCG ACCT CAGCCGGC TGGCTGAGCATCTGC TERM 281 442454 - 442425 - g 95 -12.8 -4.4078 | overlap 442426 TCTTCCCAATGAAAA GCGACCCGGCCG AGCATG CGACCGGGTCGT CAAATCCCGCCCCAA TERM 282 442453 - 442426 - g 89 -16.3 -3.24146 | overlap 442425 CTTCCCAATGAAAAG CGACCCGGCCG AGCATG CGACCGGGTCG TCAAATCCCGCCCCA Bphy_7667 441181 - 442509 + | transposase IS4 family protein Bphy_7668 444017 - 443565 - | hypothetical protein Bphy_7669 444415 - 444206 - | hypothetical protein TERM 283 444673 - 444651 - H 72 -9.8 -3.65046 | overlap 444667 TGTGGAGCTGAACAA CCGGCCGTTC AAG AAACTGCCGG GCAGTCGTCGCAGCG TERM 284 444677 - 444667 - H 71 -6.8 -4.15044 | overlap 444651 CGGCCGTTCAAGAAA CTGC CGG GCAG TCGTCGCAGCGCGTT Bphy_7670 445323 - 446081 + | IstB ATP binding domain-containing protein Bphy_7671 446128 - 446448 + | hypothetical protein Bphy_7673 446821 - 447207 + | hypothetical protein Bphy_7674 447242 - 447493 + | hypothetical protein Bphy_7675 447691 - 447933 + | hypothetical protein Bphy_7677 449015 - 449758 + | transposase IS4 family protein Bphy_7680 451561 - 451854 + | hypothetical protein Bphy_7681 452588 - 452220 - | hypothetical protein Bphy_7682 453299 - 452709 - | hypothetical protein TERM 285 453112 - 453066 - G 70 -10.9 -3.34013 | gap 2 TACCGCCTCAATGAA CGTCGTGCACATGAAGGCGAACG CAT CGGT-GCCTTCAGG-GCGCGACG CGACGGTCAGACTGT Bphy_7685 455793 - 455083 - | integrase catalytic region Bphy_7688 457348 - 457902 + | methyltransferase type 11 TERM 286 459459 - 459472 + G 70 -2.3 -4.7078 | overlap 459445 ACCCGTTGGCAGCTA TCCCG TCAA CGAGA TTTTTGAGTCGTTAC Bphy_7690 459412 - 460119 + | hypothetical protein Bphy_7691 460468 - 461343 + | endonuclease/exonuclease/phosphatase TERM 287 461661 - 461680 + T 71 -7.8 -3.95378 | TAATGATCCTTGGTG CAGGCGAT ATCG ACCGCCTG TTCTTTGCGATCTGC TERM 288 462326 - 462350 + T 71 -10.7 -3.61398 | opp_overlap 462330, overlap 462329 462344 CGTCAAGGATATCGG CAAAGCGTGCA CGC TGCGCGCCTTG TTGTTGAACACAGGG Bphy_7696 462661 - 462446 - | hypothetical protein Bphy_7697 462927 - 462682 - | hypothetical protein TERM 289 462861 - 462888 + g 79 -6.2 -4.59773 | gap 1 GCAGGCGCACACGCG CTGTCCGGCCTCG CGT CGAG-CCGACCAG TTTTTCGACCTGAGA Bphy_7698 463135 - 463473 + | hypothetical protein TERM 290 463678 - 463733 + F 76 -12.4 -3.40597 | gap 1, overlap 463673 463677 CGACGCATGGTGGAG CGGGCTCCGTTACGTGCGG-CGCAGTG TGG TGCTGCGGCTGCTCGGTACGGTGCTCG TCTTTAGCTGCGCGA TERM 291 465170 - 465196 + G 72 -11.6 -3.54741 | gap 1, opp_overlap 465190 CGTCGGCGCGCGGAC GCGCGCCT-GC ATGCAA GCGAGGCGCGC TTTCGCGCGATCGTC TERM 292 465965 - 465997 + G 71 -11.9 -3.25823 | opp_overlap 465958 CTGACGAACGTCACG CGGCATGCCGACGCG ACG CGCGTCGATGTGACG TTGATCTCGACGGCG Bphy_7700 464585 - 466210 + | multi-sensor signal transduction histidine kinase TERM 293 466467 - 466506 + T 71 -12 -2.87132 | gap 1 CATTCACGACGAGGC GCAGGTGGCG-TCGCGCGC ATT GCGCGCGGGCGCGACGGGC TATCTGACCAAGGAC TERM 294 467151 - 467125 - T 72 -4.5 -4.6902 | gap 1 GCACAACGCGAAAAA TGATGAT-CCGA CCCA CCGGCACCATCA TCGCGCCTCCGACGC Bphy_7704 469563 - 469003 - | hemerythrin HHE cation binding domain-containing protein Bphy_7706 471536 - 470097 - | coproporphyrinogen dehydrogenase TERM 295 471170 - 471188 + g 72 -8.8 -3.98159 | overlap 471173 GACACGGAACGTTCT GAAGCCAC ATA GTGGCCTC TTTGATGTTGTAATC Bphy_7707 474205 - 471536 - | glycosyl transferase family protein TERM 296 472643 - 472664 + g 84 -13.1 -3.78934 | GAAAGTGTTAATTTT TTCGACGGA GTCG TCCGTCGAA TTATTGTCCACAAAA TERM 297 473347 - 473317 - G 100 -5.4 -5.69379 | overlap 473308 ACACAACCAAAAAAA CTTTCCGGTCGATA TCG TTCCGACTGAAAAG CTGGTTTAGTCGATG Bphy_7708 474830 - 474336 - | hypothetical protein Bphy_7709 475927 - 474914 - | LacI family transcription regulator Bphy_7710 476475 - 475924 - | hypothetical protein TERM 298 476349 - 476307 - G 72 -12.9 -3.05844 | gap 2 GCTTCGAGCGGAACA GCGGCGTGCGCAGCGATCT GTGTTCG AGATCGC-GCG-ACACCGC ATGCCCAAGCACGCC Bphy_7711 479614 - 476561 - | acriflavin resistance protein TERM 299 477670 - 477641 - G 71 -12.1 -3.21099 | gap 1 CGTGCTGATGACGAA CTGCACGGGCAAGC CCT GCGCGCCCG-GCAG CGGCGGAAACTGGAA TERM 300 479465 - 479489 + g 100 -14.3 -4.2349 | GCTCGCGCCGTAGTA CGACGTGGTGA TCG TCACCACGCCG TTTTCGGTCTGCGGA Bphy_7712 480777 - 479626 - | RND family efflux transporter MFP subunit TERM 301 480231 - 480266 + g 79 -2.6 -5.07652 | gap 2, overlap 480232 480237 CCGGGTTGACCGTCG TGATGCCGACGCGTCC CGCGAA GGGCGCG-CG-TATCG TTTTCTTTTCGACGA Bphy_7713 482473 - 480875 - | RND efflux system outer membrane lipoprotein TERM 302 482243 - 482256 + g 71 -9.5 -3.72576 | GACGCCCGATGCGCC CGGCG ACGA CGCCG TTTGGTCGGGCAGCG Bphy_7714 483284 - 482685 - | adenylyl-sulfate kinase TERM 303 483142 - 483155 + g 71 -8.1 -4.07568 | CGTGCCTCAACCCCA TCGGC GATA GCCGA TTTTCCAGACCCGGA Bphy_7715 485211 - 483493 - | carbamoyltransferase TERM 304 484089 - 484103 + g 72 -8.5 -4.10161 | opp_overlap 484075 484070 ACGCCGTCCATCCGG CCGGC ACGTC GCCGG TTTTCACGGCTGCTC Bphy_7716 485853 - 485224 - | NodS family protein Bphy_7717 486533 - 485943 - | nodulation protein A NodA Bphy_7718 487503 - 486748 - | NodH sulfotransferase TERM 305 486910 - 486900 - G 79 -4 -4.88067 | ATGGACGCACAAAAA TTTC GAG GAAA GACCAAACCGCTTGC Bphy_7719 488392 - 487601 - | ABC transporter Bphy_7720 489307 - 488393 - | nodulation ABC transporter NodI TERM 306 488537 - 488525 - G 75 -6.9 -4.34402 | GGCTGCATAGCAAAA CAGCG TCT CGCCG CTCACCTCCATGCGC Bphy_7721 490711 - 489374 - | glycosyl transferase family protein TERM 307 489998 - 489984 - G 71 -10 -3.6445 | ATAAGAATTGTCAAA TGGCGA TCT TCGCCA AAGTCACTGCGTTTT TERM 308 490623 - 490641 + g 95 -12.4 -4.43844 | CCGCTGGACGGCATG GCGTGCAG AAC CTGCGCGC TTTTATAAATGGTCG Bphy_7722 491859 - 491161 - | polysaccharide deacetylase TERM 309 492508 - 492525 + G 70 -2.6 -4.67635 | opp_overlap 492494 ACCCGGCGAGTTGCT TCGTCG AGGTGA CGCCGA TTTTCTGATTTTGCC TERM 310 492701 - 492715 + G 83 -2.1 -5.14163 | gap 1, overlap 492701 492702 GGACGGGCGCGCAGG C-CCTC GATC GAGGAG TTTTTCTTACTCGAT Bphy_7723 492086 - 493000 + | LysR family transcriptional regulator Bphy_7724 494304 - 493012 - | putative biotin carboxylase TERM 311 493069 - 493051 - G 86 -14.6 -3.53091 | AGTTCCTTTTTCAAA GGTCGCGA GTG TCGCGACC TCCGCGAGTGTGAAG TERM 312 493302 - 493340 + g 71 -9.5 -3.72576 | opp_overlap 493297 GCATCAGGAATCCGC CGCGAGCGCGC-AACGTCG ATG CGGCGAACGCG-GCTCGCG TTTGCTCCGCGAAAC Bphy_7725 495552 - 494317 - | hypothetical protein Bphy_7726 496262 - 495564 - | hypothetical protein Bphy_7727 496859 - 497755 + | LysR family transcriptional regulator TERM 313 498145 - 498130 - f 83 -4.7 -5.09225 | ACCTGATGGAAAAAA GGTGA GCGATG TCACC AATGCAAAAACGAGG Bphy_7728 498521 - 500164 + | transcriptional regulator NifA Bphy_7729 500351 - 501844 + | nitrogenase MoFe cofactor biosynthesis protein NifE TERM 314 502749 - 502773 + G 71 -4.1 -4.56597 | opp_overlap 502729 502726 GGCAGCGCAGCCAAC TGGTCGATGCG ATG CTCGACGGCCA TTTTTACACCGGCGG Bphy_7730 501866 - 503215 + | nitrogenase molybdenum-iron cofactor biosynthesis protein NifN Bphy_7731 503272 - 503688 + | nitrogen fixation protein NifX Bphy_7732 503764 - 503982 + | hypothetical protein TERM 315 504081 - 504060 - g 78 -4.3 -4.77036 | opp_overlap 504061, overlap 504061 CTCGACGAGCAAAAA TGCATCGGC TGCG GGCGATGCT TTCGAGTCTGTTCTC TERM 316 504263 - 504251 - g 74 -4.8 -4.57073 | GATCTGTCCGAAAAA GTGC TACAG GCAC GTCCCGGCGCAGATT Bphy_7733 503979 - 504281 + | ferredoxin III, nif-specific Bphy_7734 504292 - 504870 + | NifQ family protein Bphy_7735 505500 - 505015 - | tetratricopeptide TPR_2 Bphy_7736 505873 - 505574 - | putative ferredoxin like protein; FixX Bphy_7737 507180 - 505870 - | electron-transferring-flavoprotein dehydrogenase Bphy_7738 508304 - 507180 - | electron transfer flavoprotein alpha/beta-subunit TERM 317 508261 - 508275 + g 76 -9.2 -4.08557 | CCTCCGGCCGGTTTG GCTGGC ACG GCCGGC TTCTTGTTTGAGGCA Bphy_7739 509149 - 508301 - | electron transfer flavoprotein alpha/beta-subunit Bphy_7740 509502 - 509164 - | nitrogen fixation protein NifW Bphy_7741 510681 - 509545 - | homocitrate synthase TERM 318 510586 - 510600 + g 75 -2.8 -4.72272 | opp_overlap 510586, overlap 510586 510574 AGCGCGCGAAAGTGA TGCG GCGATCG CGCA TTTTTCCTCGAGGCG TERM 319 510918 - 510937 + H 75 -12.2 -3.21194 | opp_overlap 510931 ACCGCAATTGTGATA TCTGTCGC AAAA GCGACAGA TTAGTCGGGTTTGTC TERM 320 512276 - 512249 - g 78 -12.7 -3.54488 | overlap 512247 512250 TGGTGCGAAACAAGA GGCGCTCGCCT TCGCGC AGGCGAGCGCG GTGGAGGGCGACATG TERM 321 512275 - 512250 - g 78 -16.2 -2.72371 | overlap 512249 512247 GGTGCGAAACAAGAG GCGCTCGCCT TCGCGC AGGCGAGCGC GGTGGAGGGCGACAT Bphy_7742 511113 - 512720 + | nitrogenase cofactor biosynthesis protein NifB Bphy_7743 512788 - 512982 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Bphy_7744 513048 - 513446 + | HesB/YadR/YfhF-family protein Bphy_7745 513480 - 513902 + | NifZ family protein Bphy_7746 513918 - 514259 + | hypothetical protein Bphy_7747 514280 - 514498 + | nitrogen fixation protein FixT Bphy_7748 514500 - 514781 + | hypothetical protein Bphy_7749 515195 - 514848 - | putative transposase Bphy_7750 515977 - 515735 - | FmdB family regulatory protein Bphy_7751 516577 - 515987 - | ankyrin TERM 322 516639 - 516655 + r 72 -5.1 -4.5852 | opp_overlap 516641, overlap 516641 GAAACGCTGAAATGA TAGGTCA GAC TGGCCTG TTTTCGTTTGGATTG Bphy_7752 517470 - 516643 - | hypothetical protein Bphy_7753 517691 - 518572 + | nitrogenase iron protein Bphy_7754 518644 - 520107 + | nitrogenase molybdenum-iron protein alpha chain TERM 323 520115 - 520098 - f 72 -4.8 -4.56597 | opp_overlap 520108 GGCCCCGTGGAAAAA GGCTGC CTGAGC GCAACC GGGCGCTTATGGCAC Bphy_7755 520179 - 521738 + | nitrogenase molybdenum-iron protein beta chain TERM 324 522261 - 522286 + T 70 -3.9 -4.64676 | gap 1 CCGCATTTTGCGATC GCG-GCCTAACT ATC AGGCAGGCTCGC TTTTATTACAGCTCC Bphy_7756 527695 - 522266 - | PAS sensor protein TERM 325 522962 - 522976 + g 71 -10 -3.58269 | TGACAGGTCGACCAC GAAGGC GAC GCCTTC TTTCCGACTGGATTC TERM 326 526635 - 526658 + g 72 -11 -3.5361 | overlap 526636 TTACCCGACGTGTAG AGTGCTCGTG ACGG CACGAGCACC TTCTGTAGCTCATTC TERM 327 526636 - 526657 + g 75 -14.5 -2.71684 | overlap 526635 TACCCGACGTGTAGA GTGCTCGTG ACGG CACGAGCAC CTTCTGTAGCTCATT TERM 328 527789 - 527778 - R 72 -5.8 -4.49364 | overlap 527780 AAACGTAAGAAGAAA CGTC GTCG GACG AGACTGGGCTGGACG Bphy_7758 528698 - 528492 - | hypothetical protein Bphy_7759 530789 - 528711 - | carbon starvation protein CstA TERM 329 529841 - 529870 + g 95 -12.2 -4.2803 | ACCAGACGGGGCCCG TGCCGTCGATGA ACTTCG TCATCGCCGGCA TTTTCAGTTCCGGTG Bphy_7760 530950 - 532410 + | integral membrane sensor signal transduction histidine kinase Bphy_7761 532407 - 533048 + | two component LuxR family transcriptional regulator Bphy_7762 533551 - 533045 - | hypothetical protein Bphy_7764 534531 - 535163 + | two component LuxR family transcriptional regulator Bphy_7765 535586 - 535218 - | hypothetical protein TERM 330 535498 - 535515 + g 71 -4.1 -4.57073 | GGTGGCTTCCTGGCA TGACGCT GCGG ATCGTCA TTTTTGACCGGCCTC TERM 331 536528 - 536542 + G 79 -10 -4.07568 | opp_overlap 536507 536533 536535 GTCTCCATGATTTCA CGAGAC ACC GTCTCG TTTTGCAACGGCGAG Bphy_7766 536333 - 537625 + | cytochrome P450 TERM 332 537712 - 537685 - T 74 -13.6 -2.58861 | opp_overlap 537682 537691 537700, overlap 537684 537688 CATCATTCTCAGAAT CAAGTATTGGCA AGTC CGCCAATACTTG GCCGTTTTGATGCAA TERM 333 537700 - 537716 + T 72 -6.5 -4.2558 | opp_overlap 537688 537685 537684, overlap 537691 537682 CAAGTATTGGCAAGT CCGCCAA TAC TTGGCCG TTTTGATGCAAAATA Bphy_7767 539137 - 537782 - | carboxyl transferase TERM 334 538421 - 538438 + g 70 -2.7 -4.62872 | overlap 538422 GTCATATGGTGTTCG GTGATTC GACG GAATCAA TTTTTCAAAATTGGT Bphy_7768 540563 - 539223 - | amidase TERM 335 539826 - 539863 + g 100 -2.7 -5.69262 | gap 1, overlap 539827 539830 539831 ATCATCCAGTTCCGT CCACATCGACGCCGGA AGGCCGA TTCGGCGTCGA-GTAC TTTTTATTTTTGTCG TERM 336 540062 - 540036 - G 86 -14.5 -3.52459 | gap 1, overlap 540027 AGTAATGCCACAGAA GGCGGC-CGGTA TTCT TACCGAGCCGCC GGTGTCCGTCCCGAT Bphy_7769 542282 - 540594 - | amine oxidase Bphy_7770 543256 - 542490 - | hypothetical protein TERM 337 544128 - 544155 + H 72 -6.2 -4.36914 | opp_overlap 544124, overlap 544129 GACGCGAGAATCGCA CCGACCGGAGGT GGGC ACATTCGGTCGA TTTTCTCGGAGCAAA Bphy_7771 544175 - 545029 + | fatty acid hydroxylase Bphy_7773 545774 - 546550 + | hypothetical protein TERM 338 546552 - 546600 + F 75 -8.9 -4.00042 | gap 3, overlap 546553 546576 TTACTGTCGAGTGAT TCC-GC-CGCCTAGCGTCGTGGAC TGCC GTCCGC-ACGCCGGGCGTGCCGGG TTGTTTCATCGCGCG Bphy_7774 547029 - 547223 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Bphy_7775 547289 - 547687 + | HesB/YadR/YfhF-family protein Bphy_7776 547721 - 548089 + | NifZ family protein Bphy_7777 548416 - 548634 + | nitrogen fixation protein FixT TERM 339 548709 - 548728 + F 78 -6.4 -4.67982 | overlap 548711 TATTAACAAATGCGA TGCGGCAA AACT TTGCCGAA TTTTCTTCGATAGAG Bphy_7778 549756 - 550907 + | aminotransferase class V Bphy_7779 550909 - 552231 + | O-acetylhomoserine aminocarboxypropyltransferase Bphy_7780 552261 - 553322 + | fatty acid desaturase Bphy_7781 553322 - 554146 + | peptidase C26 TERM 340 554788 - 554770 - g 77 -5.2 -4.61482 | overlap 554773 TGTTGGAAAAAATAA CAGGCGCA CTG TACGCATG CATCGCACTTGGCTT Bphy_7782 554205 - 554813 + | lysine exporter protein LysE/YggA TERM 341 555129 - 555113 - g 75 -2.9 -4.84359 | overlap 555115 TTACGCTTATAAAAA TCGCAAG CCA CTCGCCA AAAAATACACCGGTT Bphy_7783 554899 - 555804 + | homoserine O-succinyltransferase TERM 342 557108 - 557122 + G 81 -7.8 -4.56597 | CAGCGTCAGATTCGA CCTTGC TAC GCGAGG TTTTTGGCGACACAG Bphy_7784 555877 - 557235 + | glutamine synthetase catalytic region TERM 343 559014 - 559056 + F 70 -11.9 -2.83403 | gap 1, opp_overlap 559014 559015, overlap 559017 559026 GTGTAGTTGCTGAAA TGGCCTTCGCGCGCGGCCTG ACGG CGCGCCGC-CGCGATGGTCG CTTTGCTGCGGGGGA TERM 344 560513 - 560497 - f 74 -10.9 -3.54424 | GCCTAGTTGGCCAAA TCCTCGA TTG TCGAGGA GTGGAGATAGTAACC TERM 345 562416 - 562405 - g 70 -2.2 -4.63527 | CGACGAGGTTAAAAA CCTC AACG GAGA GCTAGAGGAATGTTG Bphy_7789 561827 - 562528 + | GntR family transcriptional regulator Bphy_7790 563565 - 563041 - | methyltransferase type 12 Bphy_7793 566117 - 565131 - | LysR family transcriptional regulator TERM 346 565338 - 565325 - G 70 -2.3 -4.62069 | opp_overlap 565331 TCGGGAGCGGAAAAA CAGCG ATCT CGTTG AGATAATGTCTTGCC TERM 347 566210 - 566182 - R 74 -8.2 -4.12899 | gap 1 AGTACAATGAAAGAA GCC-GACCATACC CGTC GATACGGTCCGGC AACCCAGCAAGCCTC Bphy_7794 566917 - 566165 - | Asp/Glu/hydantoin racemase Bphy_7795 567700 - 566996 - | GntR family transcriptional regulator Bphy_7796 568073 - 569215 + | peptidase M24 Bphy_7797 569427 - 570770 + | amidase Bphy_7798 570823 - 571905 + | extracellular solute-binding protein Bphy_7799 571916 - 573070 + | spermidine/putrescine ABC transporter ATPase subunit TERM 348 573648 - 573634 - g 95 -10 -4.72272 | CGCCGCGATGAAAAA GGAAGC ATT GCTTCC CAACCGCAGGATGAG Bphy_7800 573073 - 574347 + | binding-protein-dependent transport systems inner membrane component Bphy_7801 574350 - 575204 + | binding-protein-dependent transport systems inner membrane component Bphy_7802 575214 - 576032 + | N-formylglutamate amidohydrolase Bphy_7803 577571 - 576642 - | electron transfer flavoprotein alpha subunit Bphy_7804 578912 - 577572 - | electron transfer flavoprotein alpha/beta-subunit TERM 349 578068 - 578110 + g 91 -16.8 -3.56643 | overlap 578069 ACGTCTGTCTGAATG TGCAGCGCGCGGTCCGCGCC GAT GGCGAGCGCCGTGCGCAGCG TTTCCGCGCTCTGCG TERM 350 578069 - 578109 + g 87 -18.1 -2.73771 | overlap 578068 CGTCTGTCTGAATGT GCAGCGCGCGGTCCGCGCC GAT GGCGAGCGCCGTGCGCAGC GTTTCCGCGCTCTGC Bphy_7805 580178 - 578991 - | FAD dependent oxidoreductase TERM 351 580462 - 580483 + r 83 -13.7 -3.56092 | overlap 580463 TTGCGGCTTTTCCTG TCACCGCCG CGCG CGGCGGTGG TTTCCGAGGTAATCG TERM 352 580463 - 580482 + r 83 -15 -2.73441 | overlap 580462 TGCGGCTTTTCCTGT CACCGCCG CGCG CGGCGGTG GTTTCCGAGGTAATC TERM 353 580488 - 580521 + r 76 -12.5 -3.0914 | overlap 580487 580483 CGCGGCGGTGGTTTC CGAGGTAATCGGCCT GGCC ATGCTGATTGCCTCG TGTGCTTATTATTTT Bphy_7807 582333 - 581506 - | hypothetical protein Bphy_7808 582554 - 583435 + | nitrogenase iron protein Bphy_7811 584148 - 585068 + | hypothetical protein Bphy_7812 585385 - 585828 + | hypothetical protein Bphy_7813 586086 - 586634 + | chorismate mutase Bphy_7814 587628 - 587248 - | hypothetical protein Bphy_7815 588148 - 587696 - | HesB/YadR/YfhF-family protein Bphy_7816 588627 - 588316 - | hypothetical protein TERM 354 588863 - 588889 + H 100 -15.3 -5.74684 | CCCCGCTCGCCGTAA TGCCGTTCAGT TAGGC ACTGAACGGCA TTTTTGTTTTTGTTC TERM 355 589013 - 588994 - g 71 -12.8 -3.04144 | GCTCGATGCGCAACA GCCGGCCG ACCT CAGCCGGC TGGCTGAGCATCTGC TERM 356 590226 - 590197 - g 100 -17.1 -4.4078 | overlap 590198 TCTTCCCAATGAAAA GCGACCCGGCCGC GCAT GCGACCGGGTCGT CAAATCCCGCCCCAA TERM 357 590225 - 590198 - g 100 -20.6 -3.24146 | overlap 590197 CTTCCCAATGAAAAG CGACCCGGCCGC GCAT GCGACCGGGTCG TCAAATCCCGCCCCA Bphy_7817 588953 - 590281 + | transposase IS4 family protein Bphy_7819 592310 - 591150 - | porin TERM 358 592056 - 592034 - G 87 -7.6 -4.77036 | overlap 592035 CCTGACGACCAAAAA GCAGGCCGCC CTG AGCAGCCTGA CCGTTATTTAAGTTC TERM 359 592055 - 592035 - G 72 -11.1 -3.4574 | overlap 592034 CTGACGACCAAAAAG CAGGCCGCC CTG AGCAGCCTG ACCGTTATTTAAGTT TERM 360 592897 - 592926 + H 75 -12.1 -3.29511 | opp_overlap 592894 TTAGGCTCAATACCG GGACGTTGGTGCA CAAC TGCACCGGCGACC TTCTACCGAGGTCAA Bphy_7821 593581 - 594597 + | 1-aminocyclopropane-1-carboxylate deaminase