TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.642468 %AT, 2497683 nt, 12334 terms. Intergenic: 0.673832 %AT, H2T: 378806 nt, 2123 terms; T2T: 96483 nt, 1350 terms; H2H: 101896 nt, 1378 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|146295085|ref|NC_009437.1| Caldicellulosiruptor saccharolyticus DSM 8903, complete genome (length 2970275) TERM 1 970 - 957 - g 73 -2.4 -5.40014 | AAACAAGAAGAAAAA GTTG AAGTCA CAAC AACCCTAAACCCAAA Csac_0001 642 - 2006 + | chromosomal replication initiator protein DnaA TERM 2 2970 - 2958 - g 72 -4.1 -4.91109 | TTTTGACTATAAAAA TGTCA TTC CGACA GAGTATTCAACAAAG Csac_0002 2227 - 3330 + | DNA polymerase III, beta subunit TERM 3 3483 - 3453 - g 76 -6.1 -4.66609 | opp_overlap 3452 3454, overlap 3454 GATTTTAGGTAAAAA CGCCTCAGGAAAG ACAAA CCTTCTTGAGGCT ATATATTTTTGTCTT TERM 4 3482 - 3454 - g 76 -9.6 -3.39483 | opp_overlap 3452 3454, overlap 3453 ATTTTAGGTAAAAAC GCCTCAGGAAAG ACAAA CCTTCTTGAGGC TATATATTTTTGTCT TERM 5 3454 - 3482 + G 76 -9.6 -3.38109 | opp_overlap 3454 3453, overlap 3452 ATTTTAGGTAAAAAC GCCTCAGGAAAG ACAAA CCTTCTTGAGGC TATATATTTTTGTCT TERM 6 4381 - 4364 - g 75 -5.5 -4.74132 | opp_overlap 4366, overlap 4367 ACAGTTTAGTAAAAA CAGGGCT TTTG AGCCATG ATATAAATAATCTTA Csac_0003 3358 - 4407 + | DNA replication and repair protein RecF Csac_0004 4443 - 4727 + | hypothetical protein TERM 7 5549 - 5539 - g 75 -5.4 -4.84359 | TGAGGGTGAGAAAAA CCAA ATC TTGG TCGAGGTTGCAATCC TERM 8 5704 - 5693 - g 77 -3 -5.48825 | overlap 5698 GAGTATGCAAAAAAA TACA ACTT TGTA AAAGGAGATAACCAG Csac_0005 4778 - 6691 + | DNA gyrase, B subunit Csac_0006 6711 - 9140 + | DNA gyrase, A subunit TERM 9 9164 - 9188 + F 100 -10.8 -4.83243 | opp_overlap 9164 TGAGTGAATTAAAAA GGGATTACCT TTGTC GGGTAATCCC TTTCTTTTATCTCCC TERM 10 9188 - 9164 - f 100 -10.1 -4.88407 | opp_overlap 9164 TGAGTGAATTAAAAA GGGATTACC TTTGTCG GGTAATCCC TTTCTTTTATCTCCC TERM 11 11330 - 11299 - g 71 -5.2 -4.56093 | gap 1, overlap 11304 AACTCAATGATAAAA GCAAGCTCTCTTGAA AGC TTCAAG-GAGATAGC AAGGTTGAGGTTGGA Csac_0007 9442 - 11349 + | secreted protein TERM 12 11383 - 11369 - T 88 -6.4 -5.34555 | opp_overlap 11374, overlap 11374 11376 GTAGATGATAAAAAA CAAGAG ACC CCCTTG GGTATTCCTGCAAAG Csac_0008 12724 - 11759 - | hypothetical protein Csac_0009 13187 - 12864 - | hypothetical protein Csac_0011 13921 - 14286 + | hypothetical protein TERM 13 14469 - 14493 + F 100 -8.6 -5.42862 | opp_overlap 14468 14472 TTTCAATTGCAATAG CAAGCCCC ACACCACCA GGGGCTTG TTTTTTTACCACTGT TERM 14 15278 - 15254 - f 93 -9.3 -4.8384 | opp_overlap 15253 15251 TAAAGAAGGCAAAAA CAGGCGAGATA GAA TACCTTGCCTG GTGCTTTTGCTACAA TERM 15 15340 - 15308 - f 89 -8.8 -4.62904 | gap 1, opp_overlap 15315 15326, overlap 15310 15315 AAAGATTGTTAAAAA TA-TAAAAGCAGAAA AGGT TTTCTGCTTTTAGTA GAACCTTTTGCCTGC TERM 16 15337 - 15310 - f 100 -13 -3.91908 | opp_overlap 15315 15326, overlap 15308 15315 AGATTGTTAAAAATA TAAAAGCAGAAA AGGT TTTCTGCTTTTA GTAGAACCTTTTGCC TERM 17 15332 - 15315 - f 95 -8.5 -4.98672 | opp_overlap 15315 15326, overlap 15310 15308 GTTAAAAATATAAAA GCAGAAA AGGT TTTCTGC TTTTAGTAGAACCTT TERM 18 15315 - 15332 + F 87 -8.5 -4.25848 | opp_overlap 15315 15310 15308, overlap 15326 GTTAAAAATATAAAA GCAGAAA AGGT TTTCTGC TTTTAGTAGAACCTT TERM 19 15673 - 15657 - g 91 -9.5 -4.42748 | opp_overlap 15656, overlap 15654 TCAGTCGAAAAAGAA GGCAAAA AGG TTTTGCC ATGTATAGTTGAGGA Csac_0012 15465 - 16781 + | hypothetical protein TERM 20 17314 - 17303 - g 73 -5.8 -4.41616 | ATCGGTTTAAAGAAA CAGG GATT CCTG TAAAGATTCAATACT Csac_0013 16765 - 17766 + | hypothetical protein Csac_0014 18373 - 17786 - | methyltransferase type 11 TERM 21 17953 - 17990 + g 76 -5.1 -5.06414 | gap 1, overlap 17941 CATTACGGAATTCTT CGGTATTTCCATATTTAT ATG ATGAATA-GAAAATGCCG TTTTTCTTAAGGGCC Csac_0015 21057 - 18358 - | type III restriction enzyme, res subunit TERM 22 18939 - 18959 + g 82 -6.8 -4.92812 | opp_overlap 18938 18939, overlap 18938 18940 TAAAAAATTCAACAC GGCTTGGG CGTTT CCCAAGCA TTTCTTTTATTCTCA TERM 23 18940 - 18958 + g 82 -10.3 -3.54061 | opp_overlap 18939 18938, overlap 18938 18939 AAAAAATTCAACACG GCTTGGG CGTTT CCCAAGC ATTTCTTTTATTCTC TERM 24 19513 - 19499 - G 70 -2.8 -5.16841 | opp_overlap 19499 19501, overlap 19493 CGAGAGCAACAAAAA GCCAAA GTC TTTTGC TTATTGAATTTTAAA TERM 25 22406 - 22390 - H 71 -2.3 -5.38047 | overlap 22402 GAGGGATATAAAAAA CTATCTT GAA AATATAG GGTATAGAGAATTAA TERM 26 22807 - 22785 - H 87 -10 -3.93038 | opp_overlap 22780, overlap 22780 22772 22786 TAGTTGAATATCAAA CTGAGTTAGA TAA TCTAACTCAA AGAATGCTAAGTAAA TERM 27 22806 - 22786 - H 86 -11.3 -2.95341 | opp_overlap 22780, overlap 22780 22772 22785 AGTTGAATATCAAAC TGAGTTAGA TAA TCTAACTCA AAGAATGCTAAGTAA TERM 28 23015 - 23025 + H 71 -5.4 -4.56914 | CTTATTTTAAACCTT TGCT GTG AGCA TTTTGGTTTGCCTAA TERM 29 23074 - 23054 - H 86 -7.1 -4.83593 | AATAAGCAGGAAAAA TTAATTTTT ATC AAAAATTAA GCAATAAGACTCCAT TERM 30 23105 - 23084 - H 73 -8.1 -3.50721 | opp_overlap 23092 AATTAAGCAATAAGA CTCCATCTT CTAC AAAATGGAG ATGAATTGCTAAAAA TERM 31 23783 - 23804 + H 75 -9.5 -2.93572 | overlap 23782 TTGACACCATCGGGA CTGCCTTTT TGAT AGAAGGCAG GTTTCTAAAATCAGT TERM 32 24413 - 24392 - H 71 -8.7 -2.83899 | opp_overlap 24392, overlap 24391 AACTTCTCACTAAAG CCTCCACCT CTAC AGGTGGATG GTAGTTCACTGATGA Csac_0019 26120 - 26335 + | hypothetical protein TERM 33 26923 - 26890 - g 71 -4.7 -4.65933 | overlap 26892 CACTGCTAAAAGAAA GATTGAAAATTAAGA ACTA TCTTACCTTTCAAAC CATTGAGGATGAGTT TERM 34 29149 - 29171 + G 70 -3.5 -4.90266 | overlap 29167 TAAAGATTTTGGGCT TTTTATGCC AGATG GGGATAAAA TTTTTAATTGATGAC Csac_0020 26442 - 29489 + | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 35 29554 - 29568 + F 74 -2.9 -5.4251 | opp_overlap 29554 TTGAAAAGAAGTAAG TAAAG CAGCT CTTTA TTTTTTCTCTGTAAC Csac_0021 29695 - 30090 + | hypothetical protein TERM 36 30164 - 30119 - T 91 -7.7 -5.1861 | GCGAGCATGAAAAAA CAAATGGGCTGCCAACCTT TTTGACGG ACATTTGACAGCCCATTTG GCATGTTTCTTTTTA Csac_0022 30442 - 30182 - | stage V sporulation protein S TERM 37 30790 - 30802 + G 70 -2.7 -5.12474 | overlap 30790 TGATATTGCAAATGC CTTTT ACA AAGAG TTTTTATATATTGTC Csac_0023 30620 - 31333 + | hypothetical protein Csac_0024 31374 - 31883 + | hypothetical protein TERM 38 32451 - 32437 - g 74 -5 -4.86385 | overlap 32439 32441 AGCTGCAAAAAGAAA TACATG TCT CATGCA GACAACTTTGCAATA Csac_0025 31978 - 32790 + | hypothetical protein TERM 39 32992 - 33007 + F 90 -4.7 -5.72622 | TACTCCGTTTTTCCA CTTGC CTCGAC GCAAG TTTTTTCTTTGTAAA TERM 40 34535 - 34498 - f 87 -10.8 -3.46117 | gap 1, opp_overlap 34495 34494 34509 34509, overlap 34500 34502 AGTATATCAGGATAA TATAGGTAACACCAACC GCATT GGTTGGTGTTACC-AGA AAAAATTTTAAAAAA TERM 41 34533 - 34500 - f 100 -13.4 -3.29987 | gap 1, opp_overlap 34495 34494 34509 34509, overlap 34498 34502 TATATCAGGATAATA TAGGTAACACCAACC GCATT GGTTGGTGTTACC-A GAAAAAATTTTAAAA TERM 42 34532 - 34502 - f 100 -18.5 -3.21036 | opp_overlap 34495 34494 34509 34509, overlap 34500 34498 TATCAGGATAATATA GGTAACACCAACC GCATT GGTTGGTGTTACC AGAAAAAATTTTAAA TERM 43 34509 - 34525 + F 72 -8.7 -3.01712 | opp_overlap 34502 34500 34498, overlap 34509 34495 34494 ATAATATAGGTAACA CCAACCG CAT TGGTTGG TGTTACCAGAAAAAA TERM 44 34541 - 34551 + F 72 -2.6 -5.47964 | opp_overlap 34541, overlap 34535 TGTTACCAGAAAAAA TTTT AAA AAAA TTTTTATTATTTTCT TERM 45 34956 - 34935 - g 87 -11.7 -3.50119 | opp_overlap 34934, overlap 34930 34926 34933 GATTAAGCAAGAAGA CTCCATCTT CTGC AAGATGGAG ATGAATTGCTAAAAA Csac_0028 34690 - 34968 + | hypothetical protein Csac_0029 35032 - 36228 + | IS605 family transposase OrfB TERM 46 36511 - 36491 - f 84 -3.3 -5.7827 | AACACAAAGAAAAAA TTTTTAGCC ATA GTCCAAAAA CATTTTGACAACCCT Csac_0030 36588 - 37943 + | tryptophan synthase subunit beta TERM 47 37991 - 37957 - T 100 -13.8 -5.02201 | opp_overlap 37963, overlap 37958 AAAACAGCAGAAAAA CTAAAAGGGCAAGG CTACTTT CCTTGCCCTTTTAA TACAAGTCCTACTTT TERM 48 37990 - 37958 - T 100 -15.1 -3.58881 | opp_overlap 37963, overlap 37957 AAACAGCAGAAAAAC TAAAAGGGCAAGG CTACTTT CCTTGCCCTTTTA ATACAAGTCCTACTT TERM 49 37963 - 37985 + T 95 -10.6 -4.26076 | opp_overlap 37958 37957 GCAGAAAAACTAAAA GGGCAAGG CTACTTT CCTTGCCC TTTTAATACAAGTCC Csac_0031 38399 - 37971 - | hypothetical protein TERM 50 38336 - 38346 + g 73 -5.4 -4.64846 | overlap 38339 TTACAGCTGCGTATC CTTC AGA GAAG TTTTCTGCTTTGTCA Csac_0032 39458 - 38508 - | hypothetical protein Csac_0033 39706 - 40275 + | LemA family protein Csac_0034 40293 - 41162 + | hypothetical protein TERM 51 41145 - 41182 + T 88 -6.2 -5.45802 | opp_overlap 41169, overlap 41146 41147 41178 GGTTCTTCTGGCGGT GGTGGCGCAAGCAGGT GAAAAA GCCTGCTTGCGCAAAA TTTTTGTTTTAAAAA TERM 52 41146 - 41181 + T 83 -9.7 -3.86397 | opp_overlap 41169, overlap 41145 41147 41178 GTTCTTCTGGCGGTG GTGGCGCAAGCAGGT GAAAAA GCCTGCTTGCGCAAA ATTTTTGTTTTAAAA TERM 53 41147 - 41180 + T 100 -13.2 -2.90754 | opp_overlap 41169, overlap 41146 41145 41178 TTCTTCTGGCGGTGG TGGCGCAAGCAGGT GAAAAA GCCTGCTTGCGCAA AATTTTTGTTTTAAA TERM 54 41188 - 41198 + T 70 -4 -4.95484 | overlap 41183 TTGCGCAAAATTTTT GTTT TAA AAAC TTTTCTTTCCTCATC Csac_0035 41424 - 41212 - | hypothetical protein TERM 55 42124 - 42157 + r 71 -6.9 -3.97406 | gap 1, opp_overlap 42133 42150, overlap 42120 42144 42150 ATTTAGCTACCTCAG GTCGACAGATTTGACT TTC GGTCAAAT-TGTAGAC TTTATACAATTTTGC TERM 56 42282 - 42250 - R 100 -6.3 -5.95286 | AGCAAAAACAAAAAA GGAAGCCAGCCTC AATCAGA AAAGCCAGCTTCC TTTTTCTCAAAAAAG Csac_0037 42546 - 42373 - | hypothetical protein TERM 57 43021 - 43000 - H 73 -8.1 -3.51679 | opp_overlap 42999, overlap 42995 42991 AAAACAGTAAGAAGA CTCCATCTT CTTC AAGATAGAG ATGAATTGCTAAAGA Csac_0040 43298 - 44776 + | integrase catalytic subunit Csac_0041 44773 - 45564 + | IstB ATP binding domain-containing protein Csac_0042 45921 - 46319 + | hypothetical protein TERM 58 47374 - 47361 - g 76 -2.4 -5.52096 | opp_overlap 47361 AAACTTAACAAAAAA GCAT ATCTTG ATGC AATTTTTAGCCTTTG Csac_0043 46365 - 47786 + | CRISPR-associated DxTHG family protein Csac_0044 47866 - 49179 + | hypothetical protein TERM 59 49252 - 49238 - T 76 -3.5 -5.51046 | opp_overlap 49233 49238, overlap 49239 CAAACAGATAAAAAA CCTCC TTCTT GGAGA TTTTTCGCTTTCTGA TERM 60 49238 - 49285 + T 75 -4.8 -5.00196 | opp_overlap 49238 49239, overlap 49233 CAAACAGATAAAAAA CCTCCTTCTTGGAGATTTTTCG CTTT CTGAGTTTTGCCAAGAAGGAGG TTTTATTATTTACAA TERM 61 49442 - 49458 + T 91 -7.3 -5.30155 | overlap 49444 ATCATATTCAGCCTT TTTGCGA ACT TCGCAGA TTTTTTGGTTCGTAA Csac_0045 50497 - 49550 - | transposase, IS4 family protein Csac_0046 50669 - 51598 + | hypothetical protein TERM 62 51824 - 51807 - g 70 -2.7 -5.24531 | overlap 51808 51809 ATTCTGGACAAAAAA TCCCAAA AATT TTTTGGA CAAGTTAAAATACTT Csac_0047 51634 - 52731 + | hypothetical protein TERM 63 52898 - 52931 + F 100 -12.6 -5.71712 | opp_overlap 52895 52894 52904 AAATATAAACATCGA CAGGAAGAGAGG AACTAAAAAA CCTCTCTTCCTG TTTTTTTATATAAAG TERM 64 53333 - 53366 + F 71 -6.9 -3.97406 | gap 1, opp_overlap 53342 53359, overlap 53329 53353 53359 ATTTAGCCACCTCAG GTCGACAGATTTGACT TTC GGTCAAAT-TGTAGAC TTTATACAATTTTGC TERM 65 53491 - 53459 - f 100 -6.3 -6.07374 | overlap 53486 AGAAAAAACAAAAAA GGAAGCCAGCCTC AATCAGA AAAGCCAGCTTCC TTTTTCTCAAAAAAA TERM 66 55296 - 55269 - g 74 -4.2 -4.89521 | opp_overlap 55277, overlap 55273 ACAGCGCAAACAAAA CTTACAAAGTAT TTAA ATACTTTGATAG ACCTTGATATTGTAA Csac_0049 54450 - 55841 + | ATPase Csac_0050 56054 - 56617 + | hypothetical protein Csac_0051 56614 - 57147 + | hypothetical protein TERM 67 57173 - 57206 + TF 81 -4.6 -5.4833 | opp_overlap 57173 CTAAAAACTTTAAAA CCACAGGCATCG CAAAACAAGT TAATGCCTGTGG TTTTTTATTCAATCA TERM 68 57206 - 57173 - Tf 70 -6.1 -4.31329 | opp_overlap 57173 CTAAAAACTTTAAAA CCACAGGCATC GCAAAACAAGTT AATGCCTGTGG TTTTTTATTCAATCA TERM 69 57707 - 57672 - Tf 90 -4.8 -5.75538 | TTTAAAAAACAAAAA CCACAAGCCACTTT TTAACTCT AAAGCCACTTGTGG TTAAATTCTCTTGCT TERM 70 58532 - 58518 - gT 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 71 59069 - 59054 - gT 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_0053 59574 - 59092 - | hypothetical protein Csac_0052 57933 - 59162 + | transposase, mutator type Csac_0054 59982 - 59608 - | hypothetical protein TERM 72 60960 - 60936 - R 81 -10 -3.02632 | opp_overlap 60940, overlap 60933 GAAGGCTACAAACTA TGGAGTAGGG GCAAG CCCTACTCCT CTACCTCAAGTTTCA TERM 73 61460 - 61474 + r 79 -2.8 -5.75822 | opp_overlap 61461, overlap 61461 AAGGGAAGGCTACAA ACTTTC TTA GAAAGC TTTTTTTCCTTTCTG TERM 74 62300 - 62283 - R 70 -7.1 -3.63435 | opp_overlap 62283, overlap 62279 AATTAAAAATAGCAA TTTTTGC ACAA GCAAAAA TAATATAAAATGAAA Csac_0055 63519 - 62398 - | hypothetical protein TERM 75 63531 - 63545 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT Csac_0056 63753 - 65825 + | CRISPR-associated Csh1 family protein TERM 76 66291 - 66279 - g 78 -4.1 -5.31877 | AGCGATGAGAAAAAA CAGCA GGG TGCTA TAGGAAAAGACTACA Csac_0057 65847 - 66731 + | CRISPR-associated Csh2 family protein Csac_0058 66752 - 67504 + | CRISPR-associated Cas5 family protein TERM 77 67514 - 67541 + F 100 -9.9 -5.47964 | overlap 67515 ATGTAAAAAATCTTT TGCCATTTGGG GGATAG CCCAGATGGCG TTTTTCTTGTTTTGT TERM 78 67515 - 67540 + F 90 -11.2 -3.85118 | overlap 67514 TGTAAAAAATCTTTT GCCATTTGGG GGATAG CCCAGATGGC GTTTTTCTTGTTTTG Csac_0059 67597 - 68037 + | hypothetical protein Csac_0060 68863 - 68072 - | IstB ATP binding domain-containing protein TERM 79 69629 - 69615 - gR 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 80 70166 - 70151 - gR 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_0062 71655 - 70189 - | integrase catalytic subunit Csac_0061 69030 - 70259 + | transposase, mutator type TERM 81 71766 - 71778 + GFH 70 -2.7 -5.22137 | GGGGAATTTTTAGTG TCATT TCT GATGA TTTTATTTTATCATT TERM 82 73430 - 73420 - gfH 70 -2.6 -5.20781 | GATGATAAAAGAAAA TAAA TCA TTTA AAAAGTCTGAAGAGT Csac_0063 71675 - 73819 + | CRISPR-associated helicase Cas3 TERM 83 74146 - 74132 - gf 82 -8.6 -4.03234 | TTTGTTTTATATAAA GCTTCT AAA AGAAGC AGGAATTTCAGCAAA Csac_0064 73788 - 74345 + | CRISPR-associated Cas4 family protein Csac_0065 74396 - 75388 + | CRISPR-associated Cas1 family protein Csac_0066 75394 - 75657 + | CRISPR-associated Cas2 family protein TERM 84 75729 - 75740 + T 100 -5.8 -6.01369 | opp_overlap 75716 AAGCACCCAGCATCT GCAC TGAG GTGC TTTTTTTATTGTTTC Csac_0067 76795 - 75848 - | zeta toxin family protein Csac_0068 77115 - 76834 - | hypothetical protein TERM 85 77162 - 77176 + H 84 -10 -3.37589 | opp_overlap 77162, overlap 77155 AGCCTTTTGCAGAAA CGCTCA AAA TGAGCG TTATCAAGCTTTTTA TERM 86 77176 - 77162 - H 87 -10 -3.85817 | opp_overlap 77162 77155 AGCCTTTTGCAGAAA CGCTCA AAA TGAGCG TTATCAAGCTTTTTA Csac_0069 77279 - 77965 + | hypothetical protein TERM 87 78908 - 78922 + T 72 -2.8 -5.40014 | TTTGGTAACTATTGG TGTGAA TAC TTCTCA TTTTTCTTGTTCTTT TERM 88 79412 - 79445 + T 71 -6.9 -3.97406 | gap 1, opp_overlap 79421 79438, overlap 79408 79438 ATTTTGCTACCTCAG GTCGACAGATTTGACT TTC GGTCAAAT-TGTAGAC TTTATACAATTTTGC TERM 89 79570 - 79538 - T 100 -6.3 -6.07374 | overlap 79565 AGAAAAAACAAAAAA GGAAGCCAGCCTC AATCAGA AAAGCCAGCTTCC TTTTTCTCAAAAAAA Csac_0071 80039 - 79662 - | hypothetical protein TERM 90 80177 - 80228 + H 90 -8.4 -4.89838 | opp_overlap 80177 80184 80191, overlap 80169 80162 80181 TTATTGACTTCAAAA TTATTAACTTTAAAGTTAGTAACT CTGG AGTTAGTAACTTTAAAGTAGGTGA TTTTATGTTTGTTGG TERM 91 80181 - 80224 + H 71 -9.2 -2.56568 | opp_overlap 80177 80184 80191, overlap 80169 80162 80177 TGACTTCAAAATTAT TAACTTTAAAGTTAGTAACT CTGG AGTTAGTAACTTTAAAGTAG GTGATTTTATGTTTG TERM 92 80221 - 80184 - H 100 -13.1 -3.37533 | opp_overlap 80169 80162 80181 80177, overlap 80177 80191 CTTCAAAATTATTAA CTTTAAAGTTAGTAACT CTGG AGTTAGTAACTTTAAAG TAGGTGATTTTATGT Csac_0072 80233 - 81618 + | ATPase Csac_0073 81795 - 82340 + | hypothetical protein Csac_0074 82597 - 82737 + | hypothetical protein TERM 93 83719 - 83732 + G 73 -2.3 -5.26119 | GTGAAAGGCGACGTT TCCGG AATT CAGGA TTTTGTTTTTGACAC TERM 94 85110 - 85123 + G 74 -8.1 -3.66803 | opp_overlap 85100 85110 AAAAGCGCTTATAAA CGGCA TCTA TGCCG TTTGCAGTCTTAAAA TERM 95 85123 - 85110 - g 77 -8.1 -3.88985 | opp_overlap 85110, overlap 85100 AAAAGCGCTTATAAA CGGCA TCTA TGCCG TTTGCAGTCTTAAAA Csac_0075 82852 - 85335 + | CRISPR-associated Csm1 family protein TERM 96 85659 - 85647 - g 88 -4.9 -5.50499 | GTAGATTTAAAAAAA TGAAA CAT TTTCA GGAAATAATCGACAA TERM 97 85700 - 85675 - g 75 -9.1 -3.49938 | gap 1, overlap 85696 GGAAATAATCGACAA GGCTC-TTCCTG TTG CAGAAAAGAGCC CAGAGGCTCTAAACA TERM 98 85709 - 85696 - g 86 -8.1 -4.36914 | overlap 85675 TCCTGTTGCAGAAAA GAGCC CAGA GGCTC TAAACAGGTTCAAAG Csac_0076 85367 - 85777 + | CRISPR-associated Csm2 family protein Csac_0077 85807 - 86598 + | CRISPR-associated RAMP Csm3 family protein Csac_0078 86642 - 87652 + | CRISPR-associated RAMP Csm4 family protein Csac_0079 87642 - 88808 + | CRISPR-associated RAMP Csm5 family protein TERM 99 88862 - 88887 + G 88 -11.2 -3.77588 | opp_overlap 88864 CATTTCTGGGCAAGG GAGGATGGCG TATTTT TGCCATCCTC TTATTACTCTAAGGT Csac_0080 88805 - 89428 + | hypothetical protein TERM 100 89760 - 89739 - T 95 -8.7 -5.30339 | opp_overlap 89739 ATTAAAATATAAAAA GGGAGAGGA AACA TTCTCTCCC TTTAAGCTTGTAAAC TERM 101 89739 - 89760 + T 89 -10.9 -3.69354 | opp_overlap 89739 ATTAAAATATAAAAA GGGAGAGGA AACA TTCTCTCCC TTTAAGCTTGTAAAC Csac_0081 90178 - 89762 - | hypothetical protein TERM 102 90249 - 90292 + r 81 -10.6 -2.89361 | gap 1, opp_overlap 90250 90260, overlap 90247 90245 AAACTCTATGTTAAT ATCTTAAGCAA-CAGGGTT TTATTTT AACCCTGCTTGCTTAAGAA TACTGTTTAGTGTCT TERM 103 90291 - 90250 - R 100 -14.1 -3.0634 | gap 1, opp_overlap 90249 90247 90245, overlap 90260 AACTCTATGTTAATA TCTTAAGCAA-CAGGGTT TTATTTT AACCCTGCTTGCTTAAGA ATACTGTTTAGTGTC Csac_0082 90449 - 90267 - | YcfA family protein TERM 104 90501 - 90477 - R 74 -9.4 -2.65815 | overlap 90480 CTTACAGCTATATTA TAACACGTGT TAATT ACACGTGTCA ATAGGCTTTTAAAAA TERM 105 90498 - 90480 - R 78 -8.9 -3.47841 | overlap 90477 ACAGCTATATTATAA CACGTGT TAATT ACACGTG TCAATAGGCTTTTAA TERM 106 90631 - 90648 + r 93 -4.7 -5.95946 | opp_overlap 90631 AAAACCGAATACAAA GCTCCAC ATTT GAGGGGC TTTTTTTATTGTTGA TERM 107 91187 - 91157 - R 91 -8.4 -5.093 | GCTAAAACAATAAAA GCCACAAGCA GCACCAAAAAA TGCTTGTGGC AAAAGGATATTTTTC Csac_0083 92184 - 91213 - | hypothetical protein Csac_0084 92783 - 92574 - | hypothetical protein Csac_0085 93018 - 92746 - | hypothetical protein Csac_0086 93277 - 93567 + | hypothetical protein Csac_0087 93783 - 94952 + | hypothetical protein Csac_0088 95215 - 95613 + | hypothetical protein TERM 108 96667 - 96654 - g 76 -2.4 -5.4756 | opp_overlap 96654 AAGCTCAACAAAAAA GCAT ACTTAG ATGC AATTTTGAGTTTGGA TERM 109 96924 - 96910 - g 74 -5 -4.8543 | CAAGGCTTAGAAAAA TTGTCG ACC CAACAA AACCAATTGCCGATG Csac_0089 95658 - 97085 + | CRISPR-associated DxTHG family protein TERM 110 97117 - 97152 + T 100 -8.2 -5.65927 | ACAGTAAAATTGTAA GGCTTGCGGCCGGCTT GGCA AATCTTCCCGCAAGCC TTTTTTATTTGGCTG Csac_0090 97745 - 97392 - | SpoVA protein TERM 111 97467 - 97440 - G 100 -10.6 -5.14477 | gap 1, opp_overlap 97442 97444, overlap 97442 TACATACCCAAAAAA CACAGCT-GCGGC AAT GCCGCCAGCTGTC CTTGACACTCCCCCT TERM 112 97442 - 97465 + g 88 -13.2 -2.72344 | gap 1, opp_overlap 97440 97442, overlap 97444 CATACCCAAAAAACA CAGCT-GCGGC AAT GCCGCCAGCTG TCCTTGACACTCCCC TERM 113 97465 - 97442 - G 100 -13.2 -4.19215 | gap 1, opp_overlap 97442 97444, overlap 97440 CATACCCAAAAAACA CAGCT-GCGGC AAT GCCGCCAGCTG TCCTTGACACTCCCC TERM 114 97444 - 97463 + g 75 -10 -2.90723 | gap 1, opp_overlap 97442 97440, overlap 97442 TACCCAAAAAACACA GCT-GCGGC AAT GCCGCCAGC TGTCCTTGACACTCC Csac_0091 98800 - 97787 - | stage V sporulation protein AD Csac_0092 99307 - 98849 - | SpoVA protein Csac_0093 99520 - 99732 + | hypothetical protein Csac_0094 99799 - 100008 + | hypothetical protein TERM 115 100015 - 100055 + F 70 -8.3 -3.12449 | opp_overlap 100013, overlap 100013 ATTGGCTAAAAATTG GTGGGGCTGTCTTCTTT AAGCTAC ACAGAAGGCAGCCCCGA TATGTCTTAATAAAA Csac_0095 100328 - 100840 + | hypothetical protein TERM 116 100861 - 100905 + T 100 -10.9 -5.24531 | gap 1 ATAATTCATTTTGCA TGTGG-CATCAGGGCTGCAA CATCTT TTGCAGCTGTGGTGACCACA TTTTTTATAAAAAAT Csac_0097 103275 - 101485 - | ATPase-like protein TERM 117 102441 - 102456 + g 95 -7.6 -5.34555 | ATGCCATGTCCTTAG CTGCTT TGAT AAGCAG TTTTTTATGCTCTGC TERM 118 102699 - 102671 - G 84 -9.7 -3.64984 | opp_overlap 102663, overlap 102659 102669 AGAGTGCTCAAAAGA TTTGACTTTCCAG CAC CTGTAAAGCCAAA GATTCCAAAATGAAG Csac_0098 105175 - 103295 - | hypothetical protein TERM 119 104826 - 104862 + g 80 -6.7 -4.87626 | opp_overlap 104850, overlap 104810 GAAAAGTCCCATTTT TCATACTTGATTTTTTC CGA GTAAGGAGCAAGTATGA TTTTTCCTCTTGCAC TERM 120 105047 - 105027 - G 81 -2.5 -5.75342 | overlap 105030 GGGTTTGAAAAAAAA CTATCCCAT TCT ATGGCAAAG TCAGGCATCACGTTT Csac_0099 106291 - 105344 - | transposase, IS4 family protein TERM 121 106696 - 106727 + r 71 -6.6 -4.01137 | opp_overlap 106696 AAGTAAAAAACAAGA GGCTGTCCAC TTTGAAATATGT GTGGGCAGCC TTATTATATTAGTTT Csac_0100 107422 - 106745 - | exsB protein Csac_0101 107832 - 107458 - | putative endoribonuclease L-PSP TERM 122 107676 - 107688 + g 71 -4.8 -4.57353 | opp_overlap 107676 TATTTTTAAAGACAA GCTC TGTTT GAGC TTTTATGTCATCACC Csac_0102 108272 - 107874 - | hypothetical protein Csac_0103 108440 - 108634 + | thiamineS protein Csac_0104 108656 - 109567 + | PP-loop domain-containing protein Csac_0105 110291 - 109638 - | radical SAM domain-containing protein TERM 123 109686 - 109698 + g 78 -7.7 -4.26792 | CTTGTGAAGCTGAAG CTGCA GTC TGCAG TTTTGAAGTTTATGT TERM 124 110230 - 110211 - G 71 -5 -4.70879 | gap 1, opp_overlap 110215, overlap 110193 110215 TGCAAATCTCAAAAA GATAGCAGG AAA CCCGCT-TC TTATTCCTTCTCCTT TERM 125 110462 - 110440 - H 75 -5 -5.10064 | opp_overlap 110438 110440 TTTAATACATAAAAA TTTAAATTTC AAT GAAATATAAA TATTCTTGGCAATAT Csac_0106 111028 - 111291 + | hypothetical protein Csac_0107 111281 - 111910 + | hypothetical protein Csac_0108 111978 - 112385 + | hypothetical protein TERM 126 112498 - 112487 - g 86 -4.4 -5.60864 | TACATATTAAAAAAA CTCT ATGA AGAG GACTTTGTCTCAGGC TERM 127 112760 - 112747 - g 81 -5.3 -5.10933 | CTATGTAAAAGAAAA TCAAG AAAA CTTGA AGTCAGCAACGGTTG TERM 128 113380 - 113370 - g 88 -5.4 -5.42975 | GCAGAGAAATAAAAA TCCA AAC TGGA GAGGTGACAATAAGG Csac_0109 112454 - 113401 + | biotin--acetyl-CoA-carboxylase ligase Csac_0110 113448 - 114536 + | dihydropteroate synthase Csac_0111 114559 - 114756 + | hypothetical protein Csac_0112 114787 - 115257 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 129 115656 - 115666 + G 70 -5.4 -4.37711 | CGCACCATATCTTAT GGTA AAG TACC TTTTGCCTTTCATGA Csac_0113 115276 - 116061 + | short-chain dehydrogenase/reductase SDR Csac_0114 116081 - 116635 + | hypothetical protein TERM 130 117976 - 117988 + G 83 -6.3 -5.19261 | opp_overlap 117975 117976, overlap 117962 117968 GGATTTTTTGAAAAG GTCTT TTA AAGAC TTTTTTGATGACTTT Csac_0115 116666 - 118018 + | hypothetical protein Csac_0116 118075 - 118743 + | phage shock protein A, PspA TERM 131 118787 - 118813 + F 100 -7.3 -6.4275 | opp_overlap 118787 TTGGGCTTTTTTAAA GGTGCGGGA AAGTAAAAA TCCCGTACC TTTTTTTTATTTTTG Csac_0117 118959 - 121265 + | phosphoprotein phosphatase TERM 132 122079 - 122067 - g 73 -5.5 -4.63048 | TTTACAAAGAACAAA CACCC AAA GGGTA AAGACAATAAAAGTA Csac_0118 121249 - 122331 + | SpoIID/LytB domain-containing protein Csac_0119 122361 - 122762 + | hypothetical protein Csac_0120 122752 - 123309 + | hypothetical protein TERM 133 123381 - 123391 + F 70 -4 -4.9792 | TACATTTTATATTAT TTGT TAT ACAA TTTTTATATAAAGTC TERM 134 123470 - 123456 - g 75 -10 -2.83522 | opp_overlap 123454 123456, overlap 123455 ACTTTTGCATGAAAC CCAGGA TTT TCCTGG TATTTGTCTTGATTT TERM 135 123456 - 123470 + G 84 -10 -3.74137 | opp_overlap 123456 123455, overlap 123454 ACTTTTGCATGAAAC CCAGGA TTT TCCTGG TATTTGTCTTGATTT Csac_0121 123449 - 124384 + | hypothetical protein Csac_0122 126083 - 124461 - | NAD+ synthetase Csac_0123 126576 - 126103 - | DNA polymerase beta subunit Csac_0124 128145 - 126619 - | response regulator receiver protein TERM 136 127748 - 127759 + g 74 -4.4 -4.98436 | opp_overlap 127748 TTCTTATAAAGCATA GTCT CTAA AGAC TTTTTCTGCTCTTCA TERM 137 127923 - 127933 + g 70 -6.8 -4.1043 | CAATCTTTATGTTCG GCAG GCT CTGC TTTATAATCTTTGCA Csac_0125 129878 - 128142 - | histidine kinase internal region TERM 138 128255 - 128265 + g 73 -5.4 -4.59511 | ACGCAAGTTTTATTC TGTC ATT GACA TTTTTAAGCCCTATT TERM 139 128740 - 128760 + g 76 -7.5 -4.15237 | overlap 128741 GGGTTGATTCTTTCT TGCAGGGCT TTT AGCTCTGCC TCTTTTTGCTTTATT TERM 140 128741 - 128759 + g 79 -11 -3.06702 | overlap 128740 GGTTGATTCTTTCTT GCAGGGCT TTT AGCTCTGC CTCTTTTTGCTTTAT TERM 141 130243 - 130229 - g 85 -7 -5.06414 | overlap 130233 TGCCTGCAAGAAAAA GGCAGC TGA GCAGCC ACAGCAGAGCAGCCA TERM 142 131112 - 131092 - g 78 -9.7 -3.29829 | CAGAGCTTGCTATAA TTCCACCTG TGC CAGGTGGTA AGGGCAAACCTAACA Csac_0126 130143 - 131492 + | extracellular solute-binding protein TERM 143 131555 - 131512 - f 89 -7.6 -5.06103 | opp_overlap 131519, overlap 131519 AGAATTTTGAAAAAA GAAAAAAGAGGGGGAA AGCCTTTTTAAA CTCCCCCTCTTTTGTC TACCAATATAGTTTT TERM 144 131548 - 131519 - f 91 -4.3 -6.04324 | opp_overlap 131519, overlap 131512 TGAAAAAAGAAAAAA GAGGGGGAA AGCCTTTTTAAA CTCCCCCTC TTTTGTCTACCAATA Csac_0127 131608 - 132492 + | binding-protein-dependent transport systems inner membrane component Csac_0128 132489 - 133328 + | binding-protein-dependent transport systems inner membrane component TERM 145 133320 - 133344 + F 78 -5.7 -4.88293 | opp_overlap 133323, overlap 133323 GTTGCTGGTGCTGTC AAAGGGTGATA ATC TTTCACCCTTA TTTGTTTTTAAAATT TERM 146 133323 - 133341 + F 79 -7.4 -4.52502 | opp_overlap 133323, overlap 133320 GCTGGTGCTGTCAAA GGGTGATA ATC TTTCACCC TTATTTGTTTTTAAA Csac_0129 133468 - 135909 + | glycoside hydrolase family protein TERM 147 137279 - 137240 - g 74 -7.5 -3.87994 | gap 3, opp_overlap 137260 ATTGATCTGCATAAA CAGCAGC--TCAAAAA-AGC ACT GCTATTTTTGATAGCTGCTG TGGATACCGAAAAAG TERM 148 137832 - 137817 - g 81 -2.6 -5.67063 | gap 1 TTTACTACAAAAAAA CTGGTCA GAT TGA-CAG GGCAGAAAAACTTTT Csac_0130 136235 - 137980 + | glycoside hydrolase 15-related TERM 149 138035 - 137995 - T 95 -9.3 -5.00765 | gap 1, opp_overlap 137993 137999, overlap 137999 AATTAATGATAAAAA TAAAGACCAGCT-TGTTT GCTCTT AAACACAGCTGGTCTTTT GGTTTTATTATTACA TERM 150 138031 - 137999 - T 100 -10.1 -5.00267 | gap 1, opp_overlap 137993 137999, overlap 137995 AATGATAAAAATAAA GACCAGCT-TGTTT GCTCTT AAACACAGCTGGTC TTTTGGTTTTATTAT TERM 151 137999 - 138031 + T 100 -10.8 -4.79384 | gap 1, opp_overlap 137999 137995, overlap 137993 AATGATAAAAATAAA GACCAGCT-TGTTTG CTCT TAAACACAGCTGGTC TTTTGGTTTTATTAT Csac_0131 139000 - 138449 - | hypothetical protein TERM 152 138770 - 138780 + g 70 -2.6 -5.10461 | AAAAAATATCACAGG TTTT ATT AAAA TTTTTCTTGAGTAAC Csac_0132 139689 - 139120 - | hypothetical protein TERM 153 139354 - 139376 + gr 70 -5.6 -4.40561 | opp_overlap 139354 AAATAAAACAAAAAC TACCAAGTCT TTT ATGCTTGGTA TTATTTTTAAAACAA Csac_0133 139951 - 139658 - | hypothetical protein Csac_0134 140322 - 141536 + | glycosyl transferase, group 1 Csac_0136 141656 - 143689 + | nucleotidyl transferase Csac_0137 143779 - 144765 + | glycoside hydrolase family protein Csac_0138 144909 - 145364 + | VanZ family protein TERM 154 145428 - 145465 + T 87 -5.5 -5.68039 | opp_overlap 145429, overlap 145429 CATTTAAGATACATT ACGCCTCTGGTTTGTGG GAAA TTACTAATCAGGGGCGA TTTTTTTATAACTTT TERM 155 145429 - 145464 + T 85 -9 -3.98383 | opp_overlap 145429, overlap 145428 ATTTAAGATACATTA CGCCTCTGGTTTGTGG GAAA TTACTAATCAGGGGCG ATTTTTTTATAACTT Csac_0139 146696 - 145596 - | hypothetical protein TERM 156 146708 - 146722 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT Csac_0140 146943 - 147308 + | regulatory protein GntR, HTH Csac_0141 147317 - 148024 + | ABC transporter related Csac_0142 148011 - 148763 + | hypothetical protein Csac_0143 148772 - 149527 + | hypothetical protein Csac_0144 149559 - 150500 + | ABC transporter related TERM 157 151059 - 151046 - g 74 -3.9 -5.10077 | AAATATCTCAAAAAA CAATA AGTT TATTG GTGACAAGACCCATA Csac_0145 150484 - 151653 + | hypothetical protein TERM 158 151690 - 151742 + T 100 -12.8 -3.96892 | gap 1, opp_overlap 151707, overlap 151692 GCTGTTTATCTATTT TTCCCTGGTCAACCAAACTCGTGCA AAAT TGCACGAGTTTGGCAG-CTGGGGTA TTTGTAGTCCGCCTT TERM 159 151692 - 151740 + T 100 -15.4 -3.57406 | gap 1, opp_overlap 151707, overlap 151690 TGTTTATCTATTTTT CCCTGGTCAACCAAACTCGTGCA AAAT TGCACGAGTTTGGCAG-CTGGGG TATTTGTAGTCCGCC TERM 160 151726 - 151707 - T 100 -12.2 -3.90112 | opp_overlap 151692 151690 CCCTGGTCAACCAAA CTCGTGCA AAAT TGCACGAG TTTGGCAGCTGGGGT Csac_0146 153300 - 151837 - | transposase, putative TERM 161 153221 - 153193 - G 87 -11.9 -3.14211 | ATGCCCTTCCAGTAA CCTCTTGTATG CATACCT CATACAAGAGG ACCATCTTCTCATAA Csac_0147 153670 - 153284 - | regulatory protein, MerR Csac_0148 154282 - 153788 - | hypothetical protein Csac_0149 155802 - 154291 - | cation transporter Csac_0150 156632 - 155967 - | TrkA domain-containing protein Csac_0151 157249 - 156629 - | TrkA domain-containing protein TERM 162 157863 - 157880 + G 74 -8.5 -3.79113 | opp_overlap 157863 157862 157867 ACTCCAATCAAAACT TAAAGGG GCAA CCCTTTA TTCTTCTGAGACAAT Csac_0152 157396 - 159135 + | SpoIID/LytB domain-containing protein Csac_0153 159132 - 160169 + | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Csac_0154 160302 - 160877 + | hypothetical protein TERM 163 161506 - 161485 - g 81 -8.1 -4.32491 | gap 1, overlap 161489 ATTGAAAAAGAAGAA CAAGCTCTGA AGT TCAG-GCTTG AGAGTATAAAAGAAA Csac_0155 161107 - 161535 + | hypothetical protein TERM 164 163401 - 163375 - g 75 -7.4 -4.20932 | AAGACTTAGTGAAAA GCTTTTTGAG GTGACTT CCCAAAAAGC AGCGGCTGAACAAAA Csac_0156 161522 - 164587 + | chromosome segregation ATPase-like protein TERM 165 165022 - 165006 - g 80 -6.7 -4.86731 | opp_overlap 165005 TGTCTTTAAAGAAAA TTTCAAA TCA TTTGAAA GCTTTTACAAAAAGT Csac_0157 164584 - 165852 + | hypothetical protein Csac_0158 166179 - 168383 + | ABC-type bacteriocin transporter Csac_0160 169945 - 168716 - | transposase, mutator type TERM 166 168809 - 168824 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 167 169346 - 169360 + g 74 -2.8 -5.2696 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTTTAA TERM 168 171643 - 171698 + H 100 -15.3 -4.05389 | gap 2, overlap 171697 AAATAAAAGAGTATG TGCTAAAGCAATTGTATCCAGTTTTCT AAAA AGGAAA--GGGTACAATTGCTTTAGCA TTTATAATGTATCTA TERM 169 172130 - 172116 - g 83 -2.2 -5.88476 | overlap 172109 172117 AAAAGAAATAAAAAA TTTAAT TGA ATCAAA TAATATGCCCAATAT TERM 170 172151 - 172167 + G 73 -2.3 -5.41143 | opp_overlap 172151, overlap 172153 TGCCCAATATAATAA TCCTATT GAC AATAGTA TTTTTTTCAGGGATA Csac_0162 171733 - 172455 + | abortive infection protein Csac_0163 172746 - 173918 + | hypothetical protein TERM 171 174052 - 174037 - g 74 -4.8 -4.8743 | TCTAAAAGAAATAAA TTTTTC AATA GAAAAA GGAGAAATTGTTGGT Csac_0164 173951 - 174898 + | ABC transporter related Csac_0165 174977 - 175213 + | hypothetical protein TERM 172 175824 - 175860 + F 76 -7.4 -4.21768 | gap 1, opp_overlap 175824 TAAATATTTTAAAAG GGGAGCAACATCAGTTT TTAT ATGC-GATGTTGTTCCC TTTTGCCATTAATTA TERM 173 176398 - 176410 + G 72 -7.7 -3.78234 | AGTCATTATTAGTTC GGCAA TAT TTGCC TTATTCCATTTAAAT Csac_0166 175955 - 176653 + | abortive infection protein Csac_0168 178702 - 177308 - | hypothetical protein TERM 174 178781 - 178745 - R 72 -8.8 -3.1505 | opp_overlap 178736, overlap 178734 ATTATTTTTTAGCAA TGAGGGTTGCCAAAAT ATTTA ATAATGACAACCCTCA AAAAAGCGATTTTAA Csac_0169 179295 - 178804 - | hypothetical protein Csac_0170 180098 - 179514 - | hypothetical protein Csac_0171 180540 - 180073 - | subtilisin-like serine protease-like protein TERM 175 180810 - 180774 - H 77 -7.5 -3.96705 | TTGATAAAACTTAAA TAGCCTACAATCC GTTTTTGCATG GGATTGTAGACTA AGATAATTTCAACTT Csac_0172 181173 - 181646 + | methyltransferase type 11 TERM 176 181661 - 181689 + F 71 -8.2 -3.31274 | opp_overlap 181660 181658 181656 AATTATAATATACAC TTGATGAGCATC ACGAA GCTGCTCATCAG TTAGATTGTTAATTG TERM 177 181795 - 181753 - f 100 -13.6 -3.54089 | opp_overlap 181758, overlap 181758 TATAGATATTAAACA TAAAACCCACGAAGGGTGAA GGT TTCACCTTTTGTGGGTTTTT ATTATTTTGTTACAA TERM 178 181758 - 181790 + F 100 -17.9 -5.47964 | opp_overlap 181753 181758 ATATTAAACATAAAA CCCACGAAGGGTGAA GGT TTCACCTTTTGTGGG TTTTTATTATTTTGT TERM 179 181790 - 181758 - f 100 -13.5 -4.83032 | opp_overlap 181758, overlap 181753 ATATTAAACATAAAA CCCACGAAGGGTGAA GGT TTCACCTTTTGTGGG TTTTTATTATTTTGT Csac_0174 182999 - 184075 + | transport system permease protein Csac_0175 184079 - 184843 + | ABC transporter related Csac_0176 184881 - 185315 + | hypothetical protein Csac_0177 185339 - 185878 + | formylmethanofuran dehydrogenase, subunit E region TERM 180 185862 - 185896 + T 100 -7.2 -5.45726 | opp_overlap 185862 ATGAAGAGTACTCAA GAGGATGGGGAAGATA AAG TCTTTTGCTCATCCTC TTTTTTTAAAGTCTC Csac_0178 186313 - 185858 - | hypothetical protein TERM 181 186934 - 186916 - g 76 -4.6 -5.12617 | GAAGGATTCAAAAAA GAACTGTT AGA AAAAGTTC GCTGGATATTAACAG Csac_0179 186562 - 187629 + | response regulator receiver modulated CheB methylesterase TERM 182 187881 - 187870 - T 71 -3 -5.16237 | opp_overlap 187870 AAGTTTATTAAAAAA TGAA CAAT TTCA TCTTCATCACAACAT Csac_0180 188515 - 187964 - | hypothetical protein Csac_0181 188652 - 188978 + | hypothetical protein Csac_0182 188991 - 189650 + | hypothetical protein Csac_0183 189676 - 190404 + | 2-phosphosulfolactate phosphatase Csac_0184 190407 - 190967 + | hypothetical protein Csac_0185 191025 - 192992 + | methionyl-tRNA synthetase Csac_0186 192989 - 193753 + | TatD family hydrolase Csac_0187 193796 - 194392 + | radical SAM domain-containing protein TERM 183 194546 - 194536 - f 77 -4 -5.35365 | opp_overlap 194536 194539 AAAACAGAATAAAAA CTTT GAA AAAG TTCATTTATTTTTGG TERM 184 194710 - 194760 + F 100 -14.1 -4.0896 | opp_overlap 194712 194716 194735 TTTCCTCCTTTTATA TAGAAAGCGGGCAGGAGCTCT ACAAGCAAA GGAGCTTCTGCCCGCTTGCGA TTTTAGGGGGAATTT TERM 185 194758 - 194712 - f 100 -13.8 -2.87132 | opp_overlap 194710, overlap 194716 194735 TCCTCCTTTTATATA GAAAGCGGGCAGGAGCTC TACAAGCAAAG GAGCTTCTGCCCGCTTGC GATTTTAGGGGGAAT TERM 186 194754 - 194716 - f 100 -13.2 -4.12532 | opp_overlap 194710, overlap 194712 194735 CCTTTTATATAGAAA GCGGGCAGGAGCTC TACAAGCAAAG GAGCTTCTGCCCGC TTGCGATTTTAGGGG TERM 187 194789 - 194832 + F 83 -10.4 -3.23638 | opp_overlap 194787 194798 194799, overlap 194799 TTTTTAACAAAGATT CTGCAAGAAGTCTCCATCTT CTGT AAGATGGAGATGAATTGCAG TTGATAAATATTTGG TERM 188 194823 - 194798 - f 80 -9.1 -3.63341 | opp_overlap 194789 194799, overlap 194799 AAGATTCTGCAAGAA GTCTCCATCTT CTGT AAGATGGAGAT GAATTGCAGTTGATA TERM 189 194822 - 194799 - f 89 -12.6 -2.77522 | opp_overlap 194789 194799, overlap 194798 AGATTCTGCAAGAAG TCTCCATCTT CTGT AAGATGGAGA TGAATTGCAGTTGAT TERM 190 194799 - 194822 + F 89 -12.6 -2.55253 | opp_overlap 194799 194798, overlap 194789 AGATTCTGCAAGAAG TCTCCATCTT CTGT AAGATGGAGA TGAATTGCAGTTGAT Csac_0188 194878 - 195213 + | transposase IS200-family protein Csac_0189 195278 - 196429 + | IS605 family transposase OrfB TERM 191 197611 - 197592 - g 74 -5 -4.73682 | overlap 197595 197607 197608 TTTTATAAGACAAAA CGAGCTTT TTGC AAAGCTTG GCAATAGCGTTGCCA TERM 192 197747 - 197716 - g 91 -9.6 -4.58395 | gap 1, overlap 197717 CTTATTTTTGAAAAA GGTGCAGACATAGAT AGT ATCTATG-CTGCACA TGATAGCGAAAATAT TERM 193 197746 - 197717 - g 95 -13.1 -3.34716 | gap 1, overlap 197716 TTATTTTTGAAAAAG GTGCAGACATAGAT AGT ATCTATG-CTGCAC ATGATAGCGAAAATA Csac_0190 196615 - 198081 + | LmbE family protein Csac_0191 198503 - 198087 - | hypothetical protein TERM 194 198590 - 198552 - R 90 -9.1 -4.70353 | gap 1 TACAACAAAGCAAAA GACCCCTTACTTTAATAT TATG ACAC-AAAGCAAGGGGTC AAATAAAGATTTTAG Csac_0192 200699 - 198612 - | heavy metal translocating P-type ATPase TERM 195 198794 - 198810 + g 74 -9.5 -3.08314 | opp_overlap 198787, overlap 198793 GAACAAACCTTGAGA TCTGGAT CAG ATCCAGA ATTTTAACAGTTGAA Csac_0193 201104 - 200742 - | regulatory protein, ArsR TERM 196 201191 - 201170 - H 93 -6.7 -5.44119 | opp_overlap 201170 TCTATTTTAAAAAAA CATATGAAC AATT ATTCATATG TTCATTATATATCTT TERM 197 201311 - 201285 - H 100 -11.8 -4.18197 | ATCCTTGACGCAAAA TCTTTTCAAATG CTA CACTTGAAAAGA AGAGGATTGTAAAAA TERM 198 201615 - 201605 - g 76 -6.8 -4.43307 | opp_overlap 201605 201604 CTTGCAATAAAAGAA GCCT TTA AGGC AGTTTTTCAAAAAAG Csac_0194 201347 - 202624 + | glycosyl transferase, group 1 TERM 199 202774 - 202749 - g 71 -4.2 -4.78266 | gap 1, overlap 202772 202773 AAAGAAAATAATAAA GAGTT-TTTGT TTTTG ACAAACAACTC ATCAAAAAGCTCTGA Csac_0195 202614 - 203453 + | HAD family hydrolase TERM 200 203815 - 203802 - g 70 -5.3 -4.4773 | overlap 203814 TGATAGCAAGCAAAA GCTTT TAAT AAAGC CTCAGGACAGAAGCC Csac_0196 203455 - 204084 + | hypothetical protein TERM 201 204223 - 204201 - Tf 79 -4.9 -5.14477 | gap 1, opp_overlap 204203 204205, overlap 204203 204205 TATATACCCAAAAAA CACAGCTGCA GCAA TGCAGCTA-G CTGTCCTTGATACTC TERM 202 204222 - 204203 - Tf 87 -8.6 -4.19215 | opp_overlap 204203 204205, overlap 204201 204205 TATACCCAAAAAACA CAGCTGCA GCAA TGCAGCTA GCTGTCCTTGATACT TERM 203 204220 - 204205 - Tf 80 -9 -3.67773 | opp_overlap 204205 204203, overlap 204203 204201 TACCCAAAAAACACA GCTGCA GCAA TGCAGC TAGCTGTCCTTGATA TERM 204 204370 - 204359 - Tf 77 -4.4 -5.24129 | opp_overlap 204359, overlap 204361 TGCTCCTATAAAAAA TGCT AAAA AGCA GTTTTTCAGAGTATT TERM 205 206241 - 206221 - gT 88 -4.7 -5.45652 | ACTTGTAACAAAAAA GCTGCCAAA CTA TTTATCAGC AGACCCACTGACAGA Csac_0198 207344 - 206790 - | BioY protein Csac_0197 204635 - 206860 + | RecD/TraA family helicase Csac_0199 207645 - 207974 + | hypothetical protein TERM 206 208025 - 207995 - f 100 -12 -5.3658 | opp_overlap 207992 207995 ATCAGAAAAACAAAA GGGGATTTTAGC GAATTAT GCCAAAATCCCC TCAATTTGTTTTTAC TERM 207 207995 - 208025 + F 81 -10.5 -2.87916 | opp_overlap 207995, overlap 207992 ATCAGAAAAACAAAA GGGGATTTTAGCG AATTA TGCCAAAATCCCC TCAATTTGTTTTTAC TERM 208 208164 - 208151 - f 76 -5.3 -4.93898 | ACAGCAGGAGAAAAA GGAAT GCAA ATTCC ACCGCCAGATGAATA TERM 209 208393 - 208413 + F 71 -3.1 -5.31275 | GATAAATAAGAAAAA GCAGGGTGC AAG GTTCCATGC TTTTTTATCGTAACA Csac_0200 208777 - 209028 + | hypothetical protein Csac_0201 209040 - 209525 + | hypothetical protein Csac_0202 209527 - 209982 + | hypothetical protein TERM 210 210674 - 210658 - g 100 -8 -5.48787 | opp_overlap 210658 ACAAGATACAAAAAA GGTGAG ATGGG CTCACC TTATGCGGTTAAGAA TERM 211 211684 - 211698 + G 81 -7.2 -4.58395 | overlap 211683 TTTTCAAGGTTCTCT GTTGTT CTC AACAAC TTTTTGCCAAATGCA Csac_0203 210154 - 212232 + | alpha amylase domain-containing protein TERM 212 212234 - 212279 + T 82 -6.3 -5.03994 | gap 1, opp_overlap 212236, overlap 212236 TTTTAGCAAAATAAG AAGAAGGGGCTTTGT-TCCA AAAACGG TGGATGAAAAGCCCCTTCTA TTTTTATATATGAAA TERM 213 212277 - 212236 - T 74 -6.7 -4.24149 | gap 1, opp_overlap 212236 212234 TTAGCAAAATAAGAA GAAGGGGC-TTTGTTCCA AAAACGG TGGATGAAAAGCCCCTTC TATTTTTATATATGA TERM 214 212236 - 212277 + T 85 -8.9 -4.14422 | gap 1, opp_overlap 212236, overlap 212234 TTAGCAAAATAAGAA GAAGGGGCTTTGT-TCCA AAAACGG TGGATGAAAAGCCCCTTC TATTTTTATATATGA Csac_0204 213545 - 212319 - | glycoside hydrolase family protein Csac_0205 214400 - 213603 - | polysaccharide deacetylase Csac_0206 216320 - 214431 - | protein of unknown function DUF303, acetylesterase putative TERM 215 215304 - 215316 + g 88 -4.9 -5.43514 | GTTGCTTATTACTCT TACAA CAA TTGTA TTTTTTCCTTCTTTT Csac_0207 217232 - 220702 + | S-layer domain-containing protein Csac_0208 220759 - 221001 + | hypothetical protein Csac_0209 220994 - 221329 + | hypothetical protein Csac_0210 221506 - 221871 + | putative 6-pyruvoyl tetrahydropterin synthase Csac_0211 221864 - 222634 + | putative GTP cyclohydrolase Csac_0212 222744 - 224138 + | hypothetical protein Csac_0213 224168 - 225334 + | amidohydrolase TERM 216 225457 - 225446 - g 81 -4.4 -5.27399 | TAAGATAGGAAAAAA CCTT TTTA AAGG TGCAATTGTGACGTT Csac_0214 225381 - 225848 + | hypothetical protein Csac_0215 225829 - 226485 + | peptidase M22, glycoprotease TERM 217 226551 - 226561 + G 72 -4 -4.9792 | opp_overlap 226551, overlap 226557 AGTGTTTATGAGATA GAAA AGC TTTC TTTTTCTGTGCCATG TERM 218 226557 - 226588 + G 70 -3.2 -5.00884 | gap 1, opp_overlap 226551, overlap 226551 226564 TATGAGATAGAAAAG CTTTCTTT-TTCTGT GCC ATGGAGCAAAGAAAG TTTTTTAGCAGAGAT TERM 219 226908 - 226923 + G 73 -5.4 -4.65933 | AATCCGCCCGATGAT GCCATA ATTA TGTGGC TTTATTTTAGAAATC Csac_0216 226488 - 226949 + | ribosomal-protein-alanine acetyltransferase Csac_0217 227361 - 226966 - | HEPN domain-containing protein Csac_0218 227671 - 227348 - | DNA polymerase beta subunit Csac_0219 229257 - 227728 - | diguanylate cyclase/phosphodiesterase TERM 220 229258 - 229239 - G 84 -5 -5.33921 | opp_overlap 229239 229241, overlap 229241 AAATCAATGAAAAAA GCTGTTTG CTTT CAAACATC TTACTTACTATGTAG Csac_0220 229482 - 230312 + | ATPase involved in chromosome partitioning-like protein TERM 221 230485 - 230433 - f 72 -8.8 -3.08991 | overlap 230432 230463 230469 ATTTTTTCAAGAAAG TTATTGACATATGCCAAAAATA GAGTATAAT TATAATTGGCATATGCCAATAA TAAAATAAAAACGGC TERM 222 230488 - 230463 - f 73 -7.7 -3.57173 | overlap 230433 230432 230469 AAAAATAGAGTATAA TTATAATTGGC ATAT GCCAATAATAA AATAAAAACGGCTTT Csac_0221 230519 - 230743 + | hypothetical protein Csac_0222 230867 - 231349 + | hypothetical protein TERM 223 231341 - 231328 - gf 73 -5.3 -4.64613 | GATAAACAATGAAAA TAGCA GTTA TGCTA ATAGGTGACAAAATA Csac_0223 231321 - 231707 + | dinitrogenase iron-molybdenum cofactor biosynthesis protein Csac_0224 231868 - 232287 + | hypothetical protein TERM 224 232379 - 232368 - f 72 -5.8 -4.35874 | TAATATAATTGAAAA TGGC ATAT GCCA AAAGGGGGATGAAAT TERM 225 234691 - 234678 - g 75 -5.3 -4.74767 | ATAAGGAACATAAAA CAGAA TCTC TTCTG GGCATTTTTCTACAA Csac_0225 232398 - 234857 + | heavy metal translocating P-type ATPase Csac_0226 234887 - 235096 + | heavy metal transport/detoxification protein Csac_0227 235202 - 235411 + | heavy metal transport/detoxification protein TERM 226 235407 - 235437 + T 100 -12.6 -5.10077 | opp_overlap 235409, overlap 235409 AGGTTGTAAGAATAG AATAGGGGCTGGGA TAT TACCAGCCCCTATG TTTTTTAAACTATTT TERM 227 235409 - 235435 + T 100 -15.2 -4.16351 | opp_overlap 235409, overlap 235407 GTTGTAAGAATAGAA TAGGGGCTGGGA TAT TACCAGCCCCTA TGTTTTTTAAACTAT TERM 228 235435 - 235409 - T 100 -15.2 -3.83318 | opp_overlap 235409 235407 GTTGTAAGAATAGAA TAGGGGCTGGGA TAT TACCAGCCCCTA TGTTTTTTAAACTAT Csac_0228 236542 - 235463 - | cation transporter-like protein TERM 229 235740 - 235724 - G 73 -6.6 -4.18494 | opp_overlap 235723 235724 235726 GATGTTTATCCAAAA TAGGAG TTTGT CTCCTA GTTTTACAACATATT Csac_0229 236977 - 236558 - | DNA polymerase beta subunit Csac_0230 237165 - 237485 + | hypothetical protein TERM 230 237984 - 238027 + F 100 -14.1 -4.85599 | opp_overlap 237989, overlap 237989 CCTTTGCCTTTGATT TCAAAGCAGCCAAATTCCG AGGTTA TGGAGTTTGGCTGCTTTTA TTTTTGTAAAATACC TERM 231 237989 - 238022 + F 100 -14 -5.35224 | opp_overlap 237989, overlap 237984 GCCTTTGATTTCAAA GCAGCCAAATTCCG AGGTTA TGGAGTTTGGCTGC TTTTATTTTTGTAAA TERM 232 238022 - 237989 - f 89 -11.1 -3.59979 | opp_overlap 237989 237984 GCCTTTGATTTCAAA GCAGCCAAATTCC GAGGTTAT GGAGTTTGGCTGC TTTTATTTTTGTAAA TERM 233 238223 - 238211 - g 89 -6.3 -5.27779 | opp_overlap 238210 TTGAATATCAAAAAA GAAAG ATT CTTTC CTACTTTGGTGCAAG Csac_0232 238078 - 239301 + | lysine 2,3-aminomutase YodO family protein Csac_0233 240274 - 239693 - | hypothetical protein TERM 234 240077 - 240095 + g 80 -2.4 -5.71712 | ATCAAAAGGAGCTGT GTAAACTT TGC AAGGTTGC TTTTTTTCTCTGAGA TERM 235 240320 - 240339 + H 70 -7.2 -3.59315 | opp_overlap 240320 TTACAAAGAGCATAA GGGAAAAG ATAT CTTTTCTC TTTCCAGATAATTAA Csac_0234 240638 - 241162 + | hypothetical protein Csac_0235 241195 - 241716 + | hypothetical protein TERM 236 241883 - 241860 - g 73 -2.4 -5.39721 | overlap 241862 TGATGAGATAAAAAA GACACATGTT TACA AACAAGTGTT GACAAAAGGTGAGTT Csac_0236 241792 - 242262 + | hypothetical protein Csac_0237 242270 - 242617 + | hypothetical protein TERM 237 242628 - 242651 + T 100 -10.4 -5.74288 | AGTGAAAAGTTTTGA TCTTGGTGGT GTAT ACCATCAAGA TTTTTTGTTATTTCT Csac_0238 244146 - 242659 - | ABC transporter related Csac_0239 244933 - 244154 - | DeoR family transcriptional regulator TERM 238 244982 - 244997 + H 76 -6.2 -4.64591 | opp_overlap 244982, overlap 244977 TTGGCTTTGAAAAAA GTTGTA CACA TACAAC TTTTATATATCCTTC TERM 239 244997 - 244982 - H 82 -6.2 -5.00616 | opp_overlap 244977 244982 TTGGCTTTGAAAAAA GTTGTA CACA TACAAC TTTTATATATCCTTC TERM 240 245106 - 245093 - H 85 -2.5 -6.12458 | CAAAAAAATAAAAAA TTTTT GATT AAAAA AGAAGGATTTTTGAT Csac_0240 245224 - 246723 + | ABC transporter related Csac_0241 246752 - 247738 + | monosaccharide-transporting ATPase Csac_0242 247853 - 248890 + | periplasmic binding protein/LacI transcriptional regulator TERM 241 248926 - 248964 + F 82 -7.6 -4.38171 | gap 1, overlap 248928 GTCAAGTGCTTGTTC T-GGGGAGGCTGTCTTT AAGCTA AAAAACAGCCTCCCTTA TTTTCATGTGCTATC TERM 242 248928 - 248961 + F 100 -14 -4.29905 | overlap 248926 CAAGTGCTTGTTCTG GGGAGGCTGTCTTT AAGCTA AAAAACAGCCTCCC TTATTTTCATGTGCT Csac_0243 249090 - 250073 + | hypothetical protein TERM 243 250147 - 250120 - T 100 -17.1 -5.42198 | opp_overlap 250120 CTTTAAAAAACAAAA GGGTTGGGCAG AAAAAA CTGCCCAACCC TTTGTTTTTACTCAC TERM 244 250120 - 250147 + T 100 -17.1 -4.91852 | opp_overlap 250120 CTTTAAAAAACAAAA GGGTTGGGCAG AAAAAA CTGCCCAACCC TTTGTTTTTACTCAC Csac_0244 250922 - 250155 - | tRNA (1-methyladenosine) methyltransferase-like protein Csac_0245 251422 - 251051 - | signal-transduction protein TERM 245 251527 - 251541 + H 88 -7.2 -5.03227 | opp_overlap 251527 AATTTATTTAATGTA TTGACT GTT AGTCAA TTTTGTTTATAATAT TERM 246 252294 - 252309 + G 73 -9 -3.37245 | opp_overlap 252289 252291 ATTACAAAATCACTT GCTGCA GTGT TGCAGC TTGGTGTTACAATGG Csac_0246 251562 - 253706 + | MMPL domain-containing protein TERM 247 254040 - 254025 - g 91 -6.2 -5.58074 | overlap 254016 GAAGGAGCAAAAAAA CTTTTG GCCT CAAAAG AACAGCTGATAAGCG TERM 248 254546 - 254586 + G 100 -4.1 -6.17669 | gap 2, overlap 254547 TTGGAAATGGCTTTT G-GGGCTTTTG-CACATTC AGGTA GACTGAGGCAAAAGCCCTC TTTTTTTATTTTGTT TERM 249 254547 - 254584 + G 84 -7.8 -4.67109 | gap 1, overlap 254546 TGGAAATGGCTTTTG GGGCTTTTG-CACATTC AGGTA GACTGAGGCAAAAGCCC TCTTTTTTTATTTTG Csac_0247 253794 - 254573 + | hypothetical protein Csac_0248 254671 - 255453 + | hypothetical protein TERM 250 255560 - 255547 - g 78 -3.9 -5.33405 | overlap 255541 TGGATGAAACAAAAA CAAAA GAGT TTTTG GCAGGAGTCCAACAA Csac_0249 255498 - 255731 + | hypothetical protein TERM 251 255989 - 255947 - f 95 -8.6 -5.15117 | opp_overlap 255952, overlap 255952 GAAAAGTGCAAAAAA TAAAAGCCTTTAATGCTATA AAG TCCGGCATTAAAGGCTTTTT TTGCTTATATAAAAG TERM 252 255952 - 255984 + F 100 -8.6 -5.69379 | opp_overlap 255947 255952 GTGCAAAAAATAAAA GCCTTTAATGCT ATAAAGTCC GGCATTAAAGGC TTTTTTTGCTTATAT TERM 253 255984 - 255952 - f 100 -8.5 -5.42198 | opp_overlap 255952, overlap 255947 GTGCAAAAAATAAAA GCCTTTAATGCTATA AAG TCCGGCATTAAAGGC TTTTTTTGCTTATAT TERM 254 256053 - 256029 - f 93 -8.5 -4.91511 | opp_overlap 256032, overlap 256032 ACGCGACCAGAAAAA GAAGCTGCCGG CAA CAGGCAGCTTT TTGTTTTAAGAGCAC TERM 255 256032 - 256050 + F 100 -10.2 -5.45802 | opp_overlap 256029 256032 CGACCAGAAAAAGAA GCTGCCGG CAA CAGGCAGC TTTTTGTTTTAAGAG TERM 256 256050 - 256032 - f 93 -10.2 -4.56153 | opp_overlap 256032, overlap 256029 CGACCAGAAAAAGAA GCTGCCGG CAA CAGGCAGC TTTTTGTTTTAAGAG Csac_0250 256119 - 256313 + | thiamine biosynthesis protein ThiS thiG 256388 - 257152 + | thiazole synthase TERM 257 258263 - 258252 - g 78 -3.6 -5.32944 | opp_overlap 258256 GTTATAATTAAAAAA GGAC TTCG GCCC GAGTTTACAAACTGG thiH 257184 - 258302 + | thiamine biosynthesis protein ThiH TERM 258 258842 - 258827 - g 100 -2.6 -6.25578 | gap 1 ATCAAAGAAAAAAAA CCTCTTG CAC CAA-AGG TAATGGCAGTTGCCG Csac_0253 258299 - 258904 + | thiamine biosynthesis protein ThiF Csac_0254 258897 - 259556 + | thiamine-phosphate pyrophosphorylase TERM 259 260672 - 260659 - g 73 -5.3 -4.63184 | overlap 260663 AAGCCACTTGAAAAA GACAT TGAG ATGTC AATTGCAAGACGTGA Csac_0255 259564 - 260829 + | thiamine biosynthesis protein ThiC TERM 260 261514 - 261528 + G 79 -7.1 -4.37534 | overlap 261513 261511 ACAGACAACATTCAC GGCAC TGGCT GTGCC TTTTCATCTGCGTTT Csac_0256 260887 - 261666 + | phosphomethylpyrimidine kinase Csac_0257 261718 - 262791 + | queuine tRNA-ribosyltransferase TERM 261 262828 - 262803 - f 77 -7.6 -4.08579 | opp_overlap 262805, overlap 262805 ATAAAAGTAATCAAA CATGAGAGGG TGTTTT CCCTCTCATT TTTTTGTTCACATTT TERM 262 262826 - 262805 - f 86 -10.2 -3.61541 | opp_overlap 262805, overlap 262803 AAAAGTAATCAAACA TGAGAGGG TGTTTT CCCTCTCA TTTTTTTGTTCACAT TERM 263 262805 - 262826 + F 100 -10.2 -5.80364 | opp_overlap 262805 262803 AAAAGTAATCAAACA TGAGAGGG TGTTTT CCCTCTCA TTTTTTTGTTCACAT TERM 264 263224 - 263212 - g 75 -9.1 -3.62478 | opp_overlap 263211 263210 GAATTAATTTTGAAA GGCTC TCT GAGCC AGTTGTTACAGGCCA TERM 265 263772 - 263759 - g 73 -2.3 -5.42259 | opp_overlap 263768 CGAGTGGGAAAAAAA TGGGC TTGT GCCAA ACGTAGTGTTTAGCT Csac_0258 262974 - 263888 + | glycosidase, PH1107-related Csac_0259 263917 - 264810 + | glycosidase, PH1107-related TERM 266 265581 - 265571 - g 70 -3.2 -5.06103 | AGAACTTGGAAAAAA TGCC ACA AGCA TTTTTTTGCGTAAGT Csac_0260 264838 - 265860 + | periplasmic binding protein/LacI transcriptional regulator TERM 267 266875 - 266847 - g 73 -2 -5.29716 | gap 2, opp_overlap 266848 266853, overlap 266848 266850 TGAAGATAAGAAAAA TTACATTCAGAAGA TGG TCTTCT-AATG-AA TTTGTATGGGCATCA TERM 268 267008 - 266985 - g 76 -6.8 -4.4267 | overlap 266978 GCTTAAAAGTCAAAA CTACCTCTGA CTTG TCAGAAATAG CATTAGTTTTTAACT Csac_0261 266051 - 267862 + | extracellular solute-binding protein Csac_0262 267881 - 268867 + | binding-protein-dependent transport systems inner membrane component Csac_0263 268864 - 269745 + | binding-protein-dependent transport systems inner membrane component Csac_0264 269748 - 270728 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Csac_0265 270725 - 271708 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Csac_0266 271735 - 271908 + | hypothetical protein Csac_0267 273585 - 272023 - | hypothetical protein TERM 269 273502 - 273492 - G 70 -2.6 -5.1356 | overlap 273486 273493 TTCCATTAAGAAAAA TTTT TTC AAAA ACATACAATACAAAA TERM 270 273651 - 273667 + H 71 -2.3 -5.49579 | opp_overlap 273647, overlap 273647 TGTTTAGCATATTTT GATAAAA ATT TTTTTTC TTTTATTTTTTGTCA Csac_0268 273772 - 274719 + | ribonuclease III Csac_0269 274712 - 275143 + | GtrA family protein TERM 271 275835 - 275824 - g 91 -5.8 -5.65678 | opp_overlap 275823 275824 ATAAAAGAGAAAAAA GCCA TTTT TGGC ATATTTGCAGGAGTC TERM 272 276316 - 276302 - g 79 -7.2 -4.40572 | opp_overlap 276291 276302 ATAAGGTTTACAAAA CTACAA ATT TTGTAG ATCTTGTAAAGAATC Csac_0270 275161 - 276600 + | hypothetical protein Csac_0271 277580 - 276585 - | radical SAM domain-containing protein TERM 273 276921 - 276939 + g 76 -6.1 -4.56775 | GGGAGATGAGTTTTC GAGTATT TCCTC AATACTC TTTTTAGGGAAGAAT TERM 274 277445 - 277457 + g 73 -3.4 -5.08824 | overlap 277432 TGTCTGCCATCTGCG GAGT TATAT ACTC TTTTTTCCATGAAGG Csac_0272 277706 - 278077 + | preprotein translocase, YajC subunit TERM 275 278138 - 278109 - f 70 -6.5 -4.27914 | opp_overlap 278109, overlap 278106 AAACTAAAAGAAGAA TGGTTCTGAAG GGTGTTGG CTTCAGAGCCA TTTATTTTTAGATAA TERM 276 278109 - 278138 + F 93 -8.7 -4.89063 | opp_overlap 278106 278109 AAACTAAAAGAAGAA TGGTTCTGAAG GGTGTTGG CTTCAGAGCCA TTTATTTTTAGATAA Csac_0273 278264 - 279016 + | dimethyladenosine transferase TERM 277 279264 - 279245 - g 73 -6.4 -4.2687 | overlap 279246 GGCAAAAATTACAAA GCCAGACA AGAT TGTCTGGA TAGATGGGTCTGAAG TERM 278 279263 - 279246 - g 77 -9.9 -3.15037 | overlap 279245 GCAAAAATTACAAAG CCAGACA AGAT TGTCTGG ATAGATGGGTCTGAA TERM 279 280067 - 280079 + G 100 -9.1 -5.09426 | opp_overlap 280067 GCTTTGGGCTATTAA CCCTG AAG CAGGG TTTTTTGGAGTTGCA TERM 280 280079 - 280067 - g 71 -9.1 -3.14132 | opp_overlap 280067 GCTTTGGGCTATTAA CCCTG AAG CAGGG TTTTTTGGAGTTGCA TERM 281 280404 - 280390 - g 75 -8.6 -3.61715 | opp_overlap 280387 TATTTGGTGGAAGAA GAGCAA AGG TTGCTC CGCTTGTATATGAAG Csac_0274 279180 - 280946 + | phosphoenolpyruvate carboxykinase TERM 282 280964 - 281004 + F 100 -11.3 -5.22258 | opp_overlap 280964 AATCACCAAATTCAA GACCTCCTTCATATACT GATACAA AGGGTGTGAAGGAGGTC TTTTGTTTTGCTTTC Csac_0275 281012 - 282253 + | hypothetical protein TERM 283 282419 - 282398 - g 80 -2.3 -5.60689 | opp_overlap 282398, overlap 282391 TGACAGAATAAAAAA GATTTTACC TCAA GATAGAATC TTCATAGTAACACAT Csac_0276 282261 - 283316 + | mannose-1-phosphate guanylyltransferase (GDP) TERM 284 283413 - 283437 + G 100 -10.1 -5.21709 | ACAAAAAGCGCAGAC GCCAAAAGG TAGCTCT CCTTTTGGC TTTTTTAATCTCAGG TERM 285 283586 - 283552 - g 73 -7.2 -4.17701 | opp_overlap 283552, overlap 283554 TGTAGAAATTACAAA TATTTCGGTCTTGCAA ATT CTGCAAGACCAAAAGG TTAACTACGATGACA TERM 286 283584 - 283554 - g 100 -14.2 -3.67823 | opp_overlap 283552, overlap 283552 TAGAAATTACAAATA TTTCGGTCTTGCAA ATT CTGCAAGACCAAAA GGTTAACTACGATGA Csac_0277 283382 - 284011 + | hypothetical protein TERM 287 284884 - 284866 - f 74 -9.6 -2.7644 | opp_overlap 284859, overlap 284865 AGTTAAGCGTGAAAG CCTTAGGC TCA ACCTAAGG ATTGCGCTTAATACT TERM 288 285781 - 285762 - f 72 -9.2 -2.65808 | overlap 285759 AGTCGTAACAAGGTA GCCGTACG GGAA CGTGCGGC TGGATCACCTCCTTT TERM 289 286393 - 286368 - f 73 -7.5 -3.62096 | opp_overlap 286367 286366 GGGGAGGAGCCCAAA CCATCGTAAGC GAAA GCTTGCGGTGG GGTTGTAGGACAGAA TERM 290 286594 - 286578 - f 76 -8.7 -3.41222 | overlap 286576 CTCCAAGGCTAAATA CTACCGG TGA CCGATAG TGGACGAGTACCGTG TERM 291 286639 - 286628 - f 76 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAGCCT TERM 292 288038 - 288024 - f 71 -7.8 -3.54424 | overlap 288037 GGGGAGGGGTGGAAA GCTCCG AAC CGAAGC CCCAGTGAACGGCGG TERM 293 288602 - 288586 - f 79 -7.3 -4.4715 | overlap 288590 GCTCAACGGATAAAA GTTACCC CGG GGATAAC AGGCTGATCTCCCCC TERM 294 291387 - 291354 - g 75 -9.7 -2.83343 | overlap 291362 AGAGGTATTATGAGA GGAGTCAATCATGAA GAAG TTCATGATCAGCTCC AGCTTAATAAATCTG TERM 295 292662 - 292648 - g 74 -3.6 -5.13016 | overlap 292649 AAGTAAAATTAAAAA CTTCTA ATT TAGAAA CACCGATATTAGAAG TERM 296 293119 - 293108 - g 70 -3 -5.17744 | opp_overlap 293108 AGATAGGAATAAAAA TTTG GTTG CAAA TGTTGTTAATGACAT Csac_0278 289797 - 294623 + | hypothetical protein TERM 297 295341 - 295396 + GT 100 -20.1 -3.65351 | gap 1, opp_overlap 295350, overlap 295342 295350 GCATCTGGGTATAGT GTTGCA-CAACAGGAGTCTTTGGCAA ATGTG TTGCCAAAGACTCCTGTTGATGCGGA TTTGGCTGAGACTGC TERM 298 295342 - 295395 + GT 100 -23.6 -2.78996 | gap 1, opp_overlap 295350, overlap 295341 295350 CATCTGGGTATAGTG TTGCA-CAACAGGAGTCTTTGGCAA ATGTG TTGCCAAAGACTCCTGTTGATGCGG ATTTGGCTGAGACTG TERM 299 295386 - 295350 - gT 100 -22.6 -3.29829 | opp_overlap 295350 295342 295341 TATAGTGTTGCACAA CAGGAGTCTTTGGCAA ATGTG TTGCCAAAGACTCCTG TTGATGCGGATTTGG TERM 300 295350 - 295386 + GT 100 -22.6 -3.17714 | opp_overlap 295350, overlap 295342 295341 TATAGTGTTGCACAA CAGGAGTCTTTGGCAA ATGTG TTGCCAAAGACTCCTG TTGATGCGGATTTGG Csac_0280 299043 - 297814 - | transposase, mutator type Csac_0279 294702 - 297884 + | hypothetical protein TERM 301 297907 - 297922 + gF 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 302 298444 - 298458 + gF 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA Csac_0281 299181 - 299690 + | hypothetical protein TERM 303 300022 - 300010 - g 79 -3.4 -5.51353 | GAAAAAGAACAAAAA CTTC CATCT GAAG TAAGGAAAATATTGC Csac_0282 299788 - 300699 + | hypothetical protein Csac_0283 300713 - 302131 + | hypothetical protein Csac_0284 302204 - 303295 + | regulator of chromosome condensation, RCC1 Csac_0285 303448 - 303864 + | hemerythrin-like metal-binding protein TERM 304 303890 - 303914 + F 100 -9.3 -5.38054 | opp_overlap 303890 CAAGAACCTGCAAAA GCTATCTGCCA CAA TGGTAGACAGC TTTTTGTTTATAAGA TERM 305 303914 - 303890 - f 88 -9.3 -4.16921 | opp_overlap 303890 CAAGAACCTGCAAAA GCTATCTGCCA CAA TGGTAGACAGC TTTTTGTTTATAAGA Csac_0286 304281 - 305417 + | hypothetical protein TERM 306 305749 - 305737 - g 79 -3.4 -5.51353 | GAAAAAGAACAAAAA CTTC CATCT GAAG TAAGGAAAATATTGC Csac_0287 305515 - 306426 + | hypothetical protein Csac_0288 306440 - 307159 + | hypothetical protein Csac_0289 308396 - 307167 - | transposase, mutator type TERM 307 307260 - 307275 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 308 307797 - 307811 + g 74 -2.8 -5.2696 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTTTAA Csac_0290 308510 - 309433 + | regulator of chromosome condensation, RCC1 Csac_0291 310507 - 309560 - | ATPase TERM 309 309749 - 309720 - G 70 -3.5 -4.92757 | opp_overlap 309725 TCAGGAAGAACAAAA TCGTAGCCTCG GACAGCAG CGAGGCTTTGA GATGCACGCATAAGA TERM 310 310429 - 310441 + g 76 -7.7 -4.17316 | opp_overlap 310429 GAGATGTTATTACAA GCTCA ATT TGAGC TTCTTTTCCCACAAT Csac_0292 310774 - 311229 + | hypothetical protein Csac_0293 311262 - 311906 + | hypothetical protein TERM 311 311939 - 311968 + F 100 -7.2 -5.40072 | opp_overlap 311966 ATAAGAATTCACAGG GGCTTGTCCAAT TGAAGC ATAGGATAAGCC TTTTTTTAAAAAACA Csac_0294 312077 - 313249 + | N-acylglucosamine 2-epimerase TERM 312 313327 - 313315 - f 100 -7.7 -5.47846 | opp_overlap 313313 313315 AAGTAAAAAAGAAAA GGCTT ATA AAGCC TATTTTGAAGGGGAA TERM 313 313315 - 313327 + F 73 -7.7 -3.63744 | opp_overlap 313315, overlap 313313 AAGTAAAAAAGAAAA GGCTT ATA AAGCC TATTTTGAAGGGGAA TERM 314 313827 - 313850 + F 86 -9.6 -4.08216 | TGCGACAAGTTTAAC GTTGACTGTG TCAT CACAGACAAC TTTTACGCAACATAC Csac_0296 314437 - 315423 + | glycosidase, PH1107-related TERM 315 315459 - 315486 + F 100 -12 -5.1417 | opp_overlap 315459 AACATACAAAAAAAA GGCCGGCAGC AGAACAAA GCTGCTGGCC TTTTTGATTTTGTAA TERM 316 315486 - 315459 - f 100 -9.8 -6.08563 | opp_overlap 315459 AACATACAAAAAAAA GGCCGGCAGC AGAACAAA GCTGCTGGCC TTTTTGATTTTGTAA Csac_0297 315674 - 317320 + | ABC-type sugar transport system periplasmic component-like protein TERM 317 317348 - 317387 + F 93 -10.8 -4.14598 | opp_overlap 317349 317350, overlap 317350 AGTTTGGTATTTTAA AGCTCACGGGACACCT AATTCTAC AGGTGTTCCGTGAGTA TTTAGTTTAATTGAC TERM 318 317386 - 317349 - f 87 -10.6 -3.59979 | opp_overlap 317348 317350, overlap 317350 GTTTGGTATTTTAAA GCTCACGGGACACCTA ATTCTA CAGGTGTTCCGTGAGT ATTTAGTTTAATTGA TERM 319 317385 - 317350 - f 100 -14.1 -2.75844 | opp_overlap 317350 317348, overlap 317349 TTTGGTATTTTAAAG CTCACGGGACACCTA ATTCTA CAGGTGTTCCGTGAG TATTTAGTTTAATTG TERM 320 317350 - 317385 + F 100 -15.6 -3.66148 | opp_overlap 317349 317350, overlap 317348 TTTGGTATTTTAAAG CTCACGGGACACCT AATTCTAC AGGTGTTCCGTGAG TATTTAGTTTAATTG Csac_0298 317432 - 318358 + | binding-protein-dependent transport systems inner membrane component Csac_0299 318385 - 319287 + | binding-protein-dependent transport systems inner membrane component TERM 321 320110 - 320093 - gf 76 -4.2 -5.1485 | GAAGGAAGAGAAAAA TCAAAC CATTGT GTTTGA AAAGCTTCTATCAAC Csac_0300 319347 - 321137 + | histidine kinase internal region TERM 322 321369 - 321342 - g 73 -3.4 -5.13521 | gap 1 AAAGGAGCTAAAAAA CCCGCCTGAAG TGATAAT CATCA-GCGGG TATGCAGATTTTGAG TERM 323 322188 - 322206 + G 79 -8.2 -4.11484 | TGAGATAGAGTACTT TTCAAGCT TGA GGCTTGAA TTTTCAAACATTGAG Csac_0301 321112 - 322620 + | response regulator receiver protein Csac_0302 324966 - 322693 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 324 323297 - 323319 + g 83 -2 -5.80364 | AGGATTGTCACAGGC CCTGTCAA AATTCCC TTAACAGG TTTTTTTGTTAGGCT TERM 325 324449 - 324459 + g 81 -4 -5.4477 | opp_overlap 324449 GATTTATCGTAGATA TCAA CAT TTGA TTTTTTTGAGAGTTT TERM 326 325052 - 325023 - R 81 -4.3 -5.49579 | opp_overlap 325022 CCAGAAAAAACAAAA TGGGTCTTTACTG CTGC CAATAAAGGCTCA AATTTCGTCAAGGCA TERM 327 325433 - 325418 - R 70 -8.2 -3.14132 | opp_overlap 325429, overlap 325428 CGCTTTCCCTATTAA GCCGCC AAAT GGCAGC ACCTGCTTGATAGGT Csac_0303 326317 - 326036 - | AbrB family transcriptional regulator TERM 328 326328 - 326360 + H 100 -14.5 -3.18945 | opp_overlap 326333, overlap 326329 326333 ATCATTTTTCACCTC TTAAAGTTAGAAAGT TTT ACTTTCTAACTTTAG TATATTCTCACTAAA TERM 329 326329 - 326359 + H 100 -15.8 -2.51045 | opp_overlap 326333, overlap 326328 326333 TCATTTTTCACCTCT TAAAGTTAGAAAGT TTT ACTTTCTAACTTTA GTATATTCTCACTAA TERM 330 326333 - 326355 + H 100 -12.2 -3.95449 | opp_overlap 326333, overlap 326329 326328 TTTTCACCTCTTAAA GTTAGAAAGT TTT ACTTTCTAAC TTTAGTATATTCTCA TERM 331 326355 - 326333 - H 91 -12.2 -3.55444 | opp_overlap 326333 326329 326328 TTTTCACCTCTTAAA GTTAGAAAGT TTT ACTTTCTAAC TTTAGTATATTCTCA Csac_0304 326816 - 327424 + | BioY protein Csac_0305 327448 - 328179 + | dethiobiotin synthase TERM 332 329242 - 329220 - g 70 -2.7 -5.13137 | gap 1 GAAATAAACGAAAAA GCAACCTACC TTGA GG-AGCTTGC CAGAAAAACTTTTGA Csac_0306 328173 - 329522 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase Csac_0307 330614 - 329622 - | biotin synthase TERM 333 330325 - 330335 + g 70 -3.2 -4.93288 | ATAACCTCGTCAACT GATG CCA CGTC TTTTATTTCAATCTT TERM 334 330436 - 330422 - G 71 -7.2 -3.96148 | opp_overlap 330420 330418 330422 CCTTGGCAGGATAAA TTGAAC ACA GTTCAA TATTGTTTTTAAAAT Csac_0308 331191 - 330934 - | hypothetical protein Csac_0309 331348 - 331899 + | hypothetical protein Csac_0310 331896 - 332159 + | hypothetical protein Csac_0311 332199 - 332633 + | hypothetical protein TERM 335 332792 - 332809 + F 82 -8.5 -4.11773 | GCAGAGCATAGATTG CAAAGAG AAAT CTCTTTG TTTTCCGAAATGTTT TERM 336 333097 - 333083 - f 82 -10 -3.33315 | opp_overlap 333083 333089 TTAAGAGCTTGATAA CGCTCA TCT TGAGCG TTTTTGCAAAAAGCT TERM 337 333083 - 333097 + F 93 -10 -4.56775 | opp_overlap 333083, overlap 333089 TTAAGAGCTTGATAA CGCTCA TCT TGAGCG TTTTTGCAAAAAGCT TERM 338 333222 - 333240 + F 81 -3 -5.74288 | opp_overlap 333223, overlap 333223 ACAATTCAAACTAAT ACTGCCTT GAT ACGGCAGC TTTTTTATTGTTTCT TERM 339 333561 - 333577 + F 72 -5.9 -4.35091 | opp_overlap 333561 AAAAAAAGAATAAGT GGCAAAA ACC TTTTGTC TTTGTTATAAATCTT Csac_0312 333641 - 334084 + | hypothetical protein Csac_0313 334188 - 335429 + | hypothetical protein Csac_0314 335426 - 335959 + | hypothetical protein TERM 340 336000 - 335982 - g 91 -6.8 -5.27477 | opp_overlap 335997 ATTTTAATGAAAAAA GTTACATA AGG CATGTAAC TGTAACAGCTATTTT Csac_0315 335963 - 337111 + | CRISPR-associated autoregulator DevR family protein protein Csac_0316 337129 - 337956 + | CRISPR-associated Cas5 family protein Csac_0317 337949 - 340675 + | CRISPR-associated helicase Cas3 Csac_0318 341686 - 340739 - | transposase, IS4 family protein Csac_0319 341847 - 342359 + | CRISPR-associated Cas4 family protein Csac_0320 342365 - 343348 + | CRISPR-associated Cas1 family protein Csac_0321 343642 - 343866 + | CRISPR-associated Cas2 family protein TERM 341 345434 - 345450 + T 75 -9.5 -2.87362 | overlap 345433 345436 CCTTTGAAACTTGCC CAGGTAA TAA TTACCTG CTTTAAGTCTTATCT TERM 342 346500 - 346474 - T 70 -7.2 -3.67296 | opp_overlap 346484, overlap 346484 TATGAGGGATGTAAA CCGGTTAGAACC GTC GGGTCCAATCGG ACGGTCATTAGGTCT TERM 343 347421 - 347407 - T 87 -8.6 -4.21351 | AAACATTGGAAGAAA TCAACC GGC GGTTGA CCTACACCCTGTCTT Csac_0322 348791 - 348000 - | IstB ATP binding domain-containing protein Csac_0323 349306 - 348788 - | hypothetical protein TERM 344 349925 - 349911 - g 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 345 350462 - 350447 - g 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_0324 349326 - 350555 + | transposase, mutator type Csac_0325 351583 - 350528 - | integrase catalytic subunit TERM 346 352006 - 352020 + H 82 -10 -3.32966 | opp_overlap 352005 352004, overlap 352004 ATCAGCTTACAAATT CCCTCA TCA TGAGGG TCTTATCTGAACTAT Csac_0326 353282 - 354190 + | hypothetical protein Csac_0327 355372 - 354143 - | transposase, mutator type TERM 347 354236 - 354251 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 348 354773 - 354787 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA Csac_0328 355448 - 355885 + | transposase IS116/IS110/IS902 family protein TERM 349 356986 - 356999 + T 70 -3.9 -5.09225 | CTGAACTATGAGGGA TGTAA ACAG TTACA TTTTTTACGTCAGAT TERM 350 359113 - 359087 - T 73 -4.4 -5.00895 | opp_overlap 359087, overlap 359089 GTCATCACAGAAAAA CCGCATTGAAAA GTA TCTTCAAAGCTG TGGATTTAAACTTTC Csac_0333 360508 - 360008 - | IstB ATP binding domain-containing protein Csac_0334 360702 - 361253 + | hypothetical protein Csac_0335 361253 - 361987 + | transposase-like protein Csac_0337 362590 - 362862 + | hypothetical protein TERM 351 362969 - 362939 - f 100 -9.9 -5.09173 | opp_overlap 362927 362939 CAACACTTTAAAAAA GAGCTTATTCTGA GGTTG TGAGAATAAGCTC TTTTTTTATTTTACA TERM 352 362939 - 362969 + F 100 -9.9 -6.09196 | opp_overlap 362939, overlap 362927 CAACACTTTAAAAAA GAGCTTATTCTGA GGTTG TGAGAATAAGCTC TTTTTTTATTTTACA TERM 353 363467 - 363436 - g 70 -8.2 -3.43546 | gap 1, opp_overlap 363435, overlap 363434 TCAGCAAAAGCAATA GTTGA-GATTTGCCT TTT AGTCAAATCGTCAAC CTCAATTGAGTATTT Csac_0338 363055 - 364590 + | peptidoglycan-binding LysM Csac_0339 366013 - 364646 - | UDP-N-acetylmuramate--alanine ligase TERM 354 364787 - 364801 + g 70 -2.8 -5.15117 | overlap 364800 TTGATCTATATACTC GCAG TCAACAC CTGC TTTTTTGAGCTTTTC TERM 355 365973 - 365956 - G 80 -9.9 -3.63991 | CATGATTTTTAAGAA TGAGTGC GATT GCACTCA TCGATATTCCACCAA Csac_0340 366216 - 367034 + | purine operon repressor Csac_0341 367156 - 367422 + | SpoVG family protein TERM 356 367478 - 367434 - T 74 -5.2 -4.7889 | opp_overlap 367439 367457, overlap 367439 ATAAAGATTTAAAAA GAAAAGGTTTCTACCCGT AACAGAAAG AAAGGTAGAAACCTTTTT TGTTATTGTGGCAGT TERM 357 367439 - 367473 + T 77 -2.9 -5.68489 | opp_overlap 367434 367439, overlap 367457 GATTTAAAAAGAAAA GGTTTCTACCCGT AACAGAAAG AAAGGTAGAAACC TTTTTTGTTATTGTG TERM 358 367473 - 367439 - T 79 -5.1 -5.2853 | opp_overlap 367439 367457, overlap 367434 GATTTAAAAAGAAAA GGTTTCTACCCGT AACAGAAAG AAAGGTAGAAACC TTTTTTGTTATTGTG Csac_0342 369754 - 367481 - | hypothetical protein TERM 359 367910 - 367888 - G 82 -7.8 -4.43844 | opp_overlap 367891, overlap 367891 TCAGCATTGACAAAA GATTTCTGTA CCT TACAGAATTC CATTGGTATAAAGAA TERM 360 368355 - 368339 - G 74 -5.1 -4.84761 | opp_overlap 368339 AGATTTGTAGAAAAA TCCCCAT GTT ATTGGGA TTTTATACCCCACAA Csac_0343 370647 - 369799 - | protein of unknown function DUF610, YibQ Csac_0344 372047 - 370719 - | hypothetical protein Csac_0345 372193 - 372624 + | CMP/dCMP deaminase, zinc-binding Csac_0346 372785 - 373237 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Csac_0347 373444 - 374205 + | DeoR family transcriptional regulator TERM 361 375201 - 375190 - g 100 -7.2 -5.61881 | GGCGAAAAAGAAAAA GGCG AGAA CGCC TATGAGATAATTGAC Csac_0348 374242 - 375741 + | carbohydrate kinase, FGGY Csac_0349 375762 - 376598 + | ketose-bisphosphate aldolase TERM 362 377345 - 377331 - g 76 -4.2 -5.19879 | TGTGAAAGACAAAAA CCATCC TGC GTATGG TGACAAGCATCCAAT Csac_0350 376645 - 377556 + | xylose isomerase domain-containing protein Csac_0351 377624 - 378595 + | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding TERM 363 378655 - 378620 - f 77 -9 -3.34398 | opp_overlap 378619 378620 378620, overlap 378618 378621 TTCTTTTTGTAAATA TTTCCCTGCGGGAA GGTGGTTA TTCCCGCAGGGAGC ATTTAAATTAGCGAA TERM 364 378620 - 378656 + F 82 -9.6 -3.75153 | gap 1, opp_overlap 378618 378620 378621, overlap 378619 378620 TTCTTTTTGTAAATA T-TTCCCTGCGGGAA GGTGGTTA TTCCCGCAGGGAGCA TTTAAATTAGCGAAA TERM 365 378620 - 378655 + F 83 -11.2 -2.84878 | opp_overlap 378618 378620 378621, overlap 378619 378620 TTCTTTTTGTAAATA TTTCCCTGCGGGAA GGTGGTTA TTCCCGCAGGGAGC ATTTAAATTAGCGAA TERM 366 378654 - 378621 - f 89 -12.5 -2.60496 | opp_overlap 378619 378620 378620, overlap 378620 378618 TCTTTTTGTAAATAT TTCCCTGCGGGAA GGTGGTTA TTCCCGCAGGGAG CATTTAAATTAGCGA Csac_0352 378763 - 379530 + | regulatory protein, IclR Csac_0353 380732 - 379503 - | transposase, mutator type TERM 367 379596 - 379611 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 368 380133 - 380147 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA Csac_0354 380877 - 381524 + | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase Csac_0355 381530 - 382558 + | ribokinase-like domain-containing protein TERM 369 382881 - 382909 + G 71 -8.9 -3.28001 | TGACAAGAAAGATGG GCTTTATGTTGGA ATG TCCACCAAAAAGC TTGAATTTGGAAGTG Csac_0356 382579 - 383409 + | 5-keto-4-deoxyuronate isomerase TERM 370 384036 - 384026 - g 71 -4.6 -4.77867 | ACAGATAATACAAAA CCGC TTC GCGA GGACCCTGTCAGAAG Csac_0357 383435 - 384196 + | 2-deoxy-D-gluconate 3-dehydrogenase TERM 371 384421 - 384403 - f 79 -8.2 -4.05389 | opp_overlap 384403 384397 CACATACATTATAAA CCTTAGCA AAA TACTAAGG TTTGTGTACATTTTT TERM 372 384753 - 384741 - g 80 -9.1 -3.92324 | TTTTTTAACACCAAA GGCTG AGG CAGCC ACAAAAGTTACATTG TERM 373 386231 - 386211 - g 75 -7 -4.35675 | AAAAATTTATCAAAA TGCATATA ACAGG TATATGCA AAGGAAATAGTTAAG Csac_0358 384646 - 386241 + | ABC-type sugar transport system periplasmic component-like protein TERM 374 387095 - 387084 - g 71 -4.4 -4.79053 | overlap 387072 AAAGACCAAAATAAA TGGT CCTC ACCA AGGTGCATGGGTTGA TERM 375 387881 - 387870 - g 74 -4.4 -5.0133 | TACCTCTGGAAAAAA TGGA GTTA TCCA ATCAGATTATGCTGA Csac_0359 386359 - 387945 + | glycoside hydrolase family protein TERM 376 388354 - 388330 - g 88 -5.7 -5.60993 | opp_overlap 388330 388334 388335 388352 TTTGGCACAAAAAAA TCTACCCACAT CAA ATGTGGCTTGA TGGTATCTACATGGC Csac_0360 387939 - 389066 + | glycosy hydrolase family protein Csac_0361 389106 - 390449 + | galacturan 1,4-alpha-galacturonidase TERM 377 390478 - 390519 + T 100 -8.9 -5.64873 | opp_overlap 390475 390478 TATTTGCTAAATGTA GGGGTATGCTCTTTG GCAACAAGGCAA AAAAGAGCATACCCC TTTTTTATTCTTACC TERM 378 390519 - 390478 - T 72 -8.9 -2.64472 | opp_overlap 390478, overlap 390475 TATTTGCTAAATGTA GGGGTATGCTCTTTG GCAACAAGGCAA AAAAGAGCATACCCC TTTTTTATTCTTACC Csac_0362 393610 - 390530 - | glycoside hydrolase family protein TERM 379 391423 - 391449 + g 74 -3.8 -5.24531 | CAAACCTGTTTTGCT TTGAGAAAATAA CAT TTACCTTCTCAA TTTTTTGTACGGCAT TERM 380 391495 - 391518 + g 78 -6.8 -4.56597 | opp_overlap 391486 391510 CTATAAGTGCAATCT GAGATTTTGT TATA ACAAAACCTC TTTTTGCCCAAGGCA TERM 381 393780 - 393750 - R 82 -6.2 -4.94109 | opp_overlap 393750 CAAAAGAAAAAATAA GGAGCTGCCA ACTTTTTTCTG TGACAGCTCC CATTTTTTGAACTCT Csac_0363 395240 - 393795 - | hypothetical protein TERM 382 395099 - 395135 + g 100 -11.8 -5.64873 | gap 1, opp_overlap 395086 395101 395103, overlap 395101 AATTTGTTATGGTAA C-AGAGGCTGAAGAGGA CTTT TTTTCTTCAGCCTCTTG TTTTTTCTTATTCAA TERM 383 395101 - 395132 + g 100 -14.6 -4.86954 | opp_overlap 395086 395101 395103, overlap 395099 TTTGTTATGGTAACA GAGGCTGAAGAGGA CTTT TTTTCTTCAGCCTC TTGTTTTTTCTTATT TERM 384 395132 - 395101 - G 78 -10.3 -3.05844 | opp_overlap 395101 395099, overlap 395086 395103 TTTGTTATGGTAACA GAGGCTGAAGA GGACTTTTTT TCTTCAGCCTC TTGTTTTTTCTTATT Csac_0364 396694 - 395237 - | hypothetical protein Csac_0365 397573 - 396710 - | hypothetical protein Csac_0366 398523 - 397570 - | ABC transporter related TERM 385 398888 - 398863 - R 100 -9 -5.4505 | opp_overlap 398863 398856 TGTTTCAACAAAAAA GACTCTCCGC TTCTCT GCAGAGAGCC TTTATTGCTTTAAAA Csac_0367 399437 - 398916 - | hypothetical protein Csac_0368 400520 - 399516 - | sodium/calcium exchanger membrane region Csac_0369 403297 - 400640 - | calcium-translocating P-type ATPase, PMCA-type TERM 386 403449 - 403409 - H 100 -17.3 -5.67283 | opp_overlap 403414 403420 AAGGCAAATAAAAAA GACTTTTAACATGTGAT GTAAATT ATCACATGTTAAAAGTC TCGCACGCCCTTTTT TERM 387 403787 - 403773 - H 77 -4.2 -5.38398 | AGAAAAATAGAAAAA CTACCA GGA TGGGAG GACAGCCTACTATGA Csac_0370 403799 - 404974 + | hypothetical protein TERM 388 404969 - 404990 + F 71 -5.3 -4.65895 | opp_overlap 404969, overlap 404972 AACTATGGATTGAAA TTTTGAGAT ACTC ATCTTAAAA TTTTTCAATAGAAAA TERM 389 406092 - 406075 - g 72 -4.1 -4.93296 | opp_overlap 406090 406091, overlap 406088 GTATTATGACAAAAA TGGGGTT CCAC AACCGCA AGCAGCAGCTGTGCT Csac_0371 405050 - 407416 + | 1A family penicillin-binding protein TERM 390 407809 - 407791 - f 70 -3.8 -5.02074 | overlap 407793 GGATCCTGCAAAAAA TACTGCCT AAG ATGCAGCA AATATCCTATAGTGA TERM 391 408472 - 408454 - f 100 -3.2 -7.14698 | AAAAAAAAAAAAAAA CATTATAT GGA ATTTAATG GAAAAACTAACCTTC TERM 392 408638 - 408665 + F 79 -3.4 -5.54907 | TGACTTGAAAAAAAG GCAGCTGGTA AAGATTAA TGCCAGGTGC TTTTTGTTTTATACA TERM 393 408765 - 408778 + F 74 -3.9 -5.25803 | TATTTGTTTTTTTCA CAATA GCTT TATTG TTTTTTATAAAGATT TERM 394 409026 - 409046 + GF 82 -6.1 -5.06414 | GCATCTGAGAAGTAT CTTGGCAGA ACT TCTGTCCAG TTTTTATTAGAAAGA Csac_0373 408948 - 409448 + | hypothetical protein Csac_0374 409382 - 410026 + | signal transduction ATPase Csac_0375 410019 - 410492 + | hypothetical protein Csac_0376 410504 - 411022 + | hypothetical protein Csac_0377 411155 - 411685 + | putative diguanylate cyclase Csac_0378 412022 - 413686 + | metal dependent phosphohydrolase Csac_0379 413862 - 414422 + | phosphodiesterase Csac_0380 414602 - 415852 + | 2-hydroxyglutaryl-CoA dehydratase, D-component Csac_0381 415866 - 417479 + | putative CoA-substrate-specific enzyme activase Csac_0382 418511 - 417501 - | DNA repair photolyase-like protein TERM 395 417816 - 417830 + gT 73 -2.1 -5.26875 | AAGCCTCACTTTCCA GCTAT TTTCT GTAGC TTTTTTAATTGCAGA TERM 396 418490 - 418477 - GT 72 -3.9 -5.00846 | opp_overlap 418483 TAAACATGAGAAAAA TTCTT AGCT AAGAA GGATTTTTCTGAGCT Csac_0383 419319 - 418480 - | hypothetical protein TERM 397 419065 - 419079 + gH 72 -8.6 -3.05046 | opp_overlap 419064 419063, overlap 419031 419064 GCAAAGAATAACATC GCCTTT TGA AAAGGC ATTTTCCACAGCTCC TERM 398 419523 - 419550 + H 81 -4.1 -5.65927 | overlap 419524 AGCACTTTTTTTGTT TTGCCTCCTCT TGAAGT AGGGGAGGAAG TTTTTTGTTTGACTG Csac_0384 419708 - 421108 + | amino acid permease-associated region Csac_0385 421232 - 422545 + | transglutaminase domain-containing protein TERM 399 423178 - 423160 - g 75 -7.4 -4.30909 | opp_overlap 423157 423170, overlap 423157 TACACACCAAAACAA GCTGTGGA ATT TGCACAGC AGGTTTACAAAGCTG Csac_0386 422569 - 423600 + | mandelate racemase/muconate lactonizing protein TERM 400 425369 - 425357 - T 70 -6.3 -4.18018 | opp_overlap 425329 425348 TTTCTTTATCTAAAA GATAC TTT GTATC AAGCTGGAATTCAGA TERM 401 425886 - 425906 + T 80 -6.1 -4.88388 | opp_overlap 425886, overlap 425891 TAATTATATCAAGCA GGATGGAGG CAG CCTCAATTC TTTTTATAACCTTCT Csac_0388 427085 - 425910 - | hypothetical protein TERM 402 427097 - 427111 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT TERM 403 428623 - 428604 - g 70 -2.8 -5.15969 | TGTTAATGCAAAAAA GGCCAACA GCAG TATTTGCC GCTAATGACGAGATG Csac_0389 427868 - 428902 + | periplasmic binding protein/LacI transcriptional regulator Csac_0390 429217 - 430188 + | xylose isomerase domain-containing protein TERM 404 430287 - 430251 - f 72 -5.9 -4.37734 | gap 1 CATAATAAGCTAAAA GGCTTTTCTTC-TGGC TGTAAT GCCAAGAAGGGAAGCC TTGAAAATAAAAATA Csac_0391 430327 - 431592 + | response regulator receiver protein TERM 405 431592 - 431650 + F 72 -9.2 -2.75066 | gap 2, opp_overlap 431595 431616, overlap 431595 431609 431612 GGACCAATGGAAATG AGATTGGTTGGTAATTAGAGGGAAGGGA AGCAA TCCCT-CCCTCTAATTACCA-CTGATGG ATTTGAAAACTTGTT TERM 406 431647 - 431595 - f 84 -10.9 -3.03781 | gap 2, opp_overlap 431592 431595 431609 431612, overlap 431616 CCAATGGAAATGAGA TTGGTTGGTAATTAGAGGGAAGGGA AGCAA TCCCT-CCCTCTAATTACCA-CTGA TGGATTTGAAAACTT TERM 407 431595 - 431647 + F 100 -15.3 -2.64651 | gap 2, opp_overlap 431595 431616, overlap 431592 431609 431612 CCAATGGAAATGAGA TTGGTTGGTAATTAGAGGGAAGGGA AGCAA TCCCT-CCCTCTAATTACCA-CTGA TGGATTTGAAAACTT TERM 408 431609 - 431634 + F 74 -9.8 -2.72661 | gap 1, opp_overlap 431595 431616, overlap 431595 431592 431612 ATTGGTTGGTAATTA GAGGGAAGGGA AGCAA TCCCT-CCCTC TAATTACCACTGATG Csac_0392 431801 - 433309 + | ABC transporter related TERM 409 433724 - 433713 - g 74 -4.4 -4.91109 | opp_overlap 433713 TGGTTACTACAAAAA TAGG AATA CCTA GTTTTATTACTACTT Csac_0393 433358 - 434329 + | monosaccharide-transporting ATPase Csac_0394 434423 - 435382 + | monosaccharide-transporting ATPase TERM 410 435487 - 435520 + F 73 -8.4 -3.53811 | gap 1, opp_overlap 435480 435478 435510 TTCAAAGATTGTGAA GCAGAGCTTT-TGAT CTTAA ATTATAAAGCTCTGC TTTAACAAACATAAA Csac_0395 435586 - 436620 + | alcohol dehydrogenase Csac_0396 436687 - 437523 + | xylose isomerase domain-containing protein TERM 411 437579 - 437521 - f 81 -9.2 -3.95126 | gap 2, opp_overlap 437533 437536, overlap 437536 GAAAAACAATTGAAA TAGGTATTTGAACAAGTGGCAGTACTCT TTCTG AGAGTACTGTCACTTGTTCA--TGCCAA ATAATTAATTTTTGT TERM 412 437533 - 437569 + F 100 -19.7 -3.1505 | opp_overlap 437521 437536, overlap 437536 AAATAGGTATTTGAA CAAGTGGCAGTACTCTT TCT GAGAGTACTGTCACTTG TTCATGCCAAATAAT TERM 413 437566 - 437536 - f 100 -12.7 -3.65522 | opp_overlap 437533 437536, overlap 437521 TAGGTATTTGAACAA GTGGCAGTACTCT TTCTG AGAGTACTGTCAC TTGTTCATGCCAAAT TERM 414 437536 - 437566 + F 100 -15.6 -3.72027 | opp_overlap 437536 437521, overlap 437533 TAGGTATTTGAACAA GTGGCAGTACTCTT TCT GAGAGTACTGTCAC TTGTTCATGCCAAAT TERM 415 437892 - 437873 - g 73 -5.8 -4.4648 | ATCTTCATTACAAAA TAGCAAAA GAGG CTTTGCTA GCAGGTAAACATGTG Csac_0397 437632 - 438792 + | oxidoreductase domain-containing protein TERM 416 440936 - 440924 - g 70 -3.4 -4.91357 | AAAGAGATAACAAAA GTGA CTGAT TCAC TTGAAATGATAGATA Csac_0398 438962 - 441145 + | methyl-accepting chemotaxis sensory transducer Csac_0399 442403 - 442816 + | BadM/Rrf2 family transcriptional regulator TERM 417 442805 - 442830 + F 90 -8.4 -4.77173 | opp_overlap 442805 442804 442807 GAGCTTGCAAAAATG GATGGAAACT AATTTC GGTTTCCATC TTTATTTTGTAGACA TERM 418 442867 - 442849 - f 89 -9 -4.52857 | opp_overlap 442849 ATTTTGTAGACAAAA GTATACTA AAA TAGTATAC TTTCAAAACATAAAA TERM 419 442849 - 442867 + F 78 -9 -3.54424 | opp_overlap 442849 ATTTTGTAGACAAAA GTATACTA AAA TAGTATAC TTTCAAAACATAAAA TERM 420 443636 - 443654 + G 70 -8.9 -3.06302 | CAGCGCCTGTAGGTT TCAGGGT AATAG ACCCTGA TTACATAAACATAAT Csac_0400 442915 - 444798 + | carbon-monoxide dehydrogenase, catalytic subunit Csac_0401 444818 - 445258 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Csac_0402 445276 - 446559 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 421 446632 - 446609 - f 91 -12.6 -3.42621 | opp_overlap 446609 AATTTCAATTTAGAA TCTTCCCTTT TTAA AAAGGGAAGA TTTTTTTATTTATTC TERM 422 446609 - 446632 + F 100 -12.6 -6.08342 | opp_overlap 446609 AATTTCAATTTAGAA TCTTCCCTTT TTAA AAAGGGAAGA TTTTTTTATTTATTC Csac_0403 446759 - 447202 + | transcriptional regulator, TrmB TERM 423 447184 - 447222 + F 70 -6.3 -4.2349 | gap 1, opp_overlap 447186 AAAAAAGGTTTTAGA TAGGTA-TGTGCACAAAT AGAG ATTTGTCTACAATACCTA TTTTGGCTATAAAAC TERM 424 448216 - 448202 - g 78 -8.6 -3.69323 | GGAGGAGTATTCAAA GCTCTT AGC AAGAGC CATTCAATGTCGTGG TERM 425 449320 - 449308 - g 71 -4.8 -4.59081 | GAAACTCAGAGAAAA GCTG AAAGA CAGC ACAGTTATTATGGTT Csac_0404 447266 - 449494 + | ABC transporter related TERM 426 449646 - 449620 - g 73 -3.2 -5.1861 | gap 1, opp_overlap 449620 GGTACTATGAAAAAA CTTATAAGGTA TTTGTC TACCT-ATAAG ATTTCTCTCATAACT Csac_0405 449491 - 451371 + | ABC transporter related TERM 427 451419 - 451389 - T 100 -12.7 -3.11999 | opp_overlap 451394, overlap 451394 AGGAAAGCTACCTAA GAAAAGTCCTGGG ATTTA CCCAGGACTTTTT TCATAATGAGTTTTC TERM 428 451414 - 451394 - T 100 -12.6 -4.68384 | opp_overlap 451394, overlap 451389 AGCTACCTAAGAAAA GTCCTGGG ATTTA CCCAGGAC TTTTTTCATAATGAG TERM 429 451394 - 451414 + T 100 -12.6 -5.1861 | opp_overlap 451394 451389 AGCTACCTAAGAAAA GTCCTGGG ATTTA CCCAGGAC TTTTTTCATAATGAG Csac_0406 452291 - 451464 - | helix-turn-helix domain-containing protein TERM 430 452039 - 452050 + g 81 -4.4 -5.33921 | opp_overlap 452039 TGTCTATTTCTATAA CCAA TGCT TTGG TTTTTTCCTTAATTT Csac_0407 452403 - 453554 + | alcohol dehydrogenase TERM 431 453570 - 453560 - T 72 -2.6 -5.44721 | overlap 453561 AGCATTTTAAAAAAA TTTT TGA AAAA ACTTAAAGGCGGGCG TERM 432 453612 - 453572 - T 91 -8.4 -5.03747 | gap 1, opp_overlap 453573 453578, overlap 453573 453578 AAATTTTTGAAAAAA CTTAAAGGCGGGCGA-TTC TGAG GAAGTTGCCCGCCTTTTAA TCTTTTAATGTTGCC TERM 433 453573 - 453611 + T 88 -11.9 -2.88389 | gap 1, opp_overlap 453572 453573 453578, overlap 453578 AATTTTTGAAAAAAC TTAAAGGCGGGCGA-TTC TGAG GAAGTTGCCCGCCTTTTA ATCTTTTAATGTTGC TERM 434 453611 - 453573 - T 82 -9.7 -3.61164 | gap 1, opp_overlap 453573 453578, overlap 453572 453578 AATTTTTGAAAAAAC TTAAAGGCGGGCGA-TTC TGAG GAAGTTGCCCGCCTTTTA ATCTTTTAATGTTGC TERM 435 453606 - 453578 - T 86 -9.6 -4.05875 | gap 1, opp_overlap 453578 453573, overlap 453573 453572 TTGAAAAAACTTAAA GGCGGGCGA-TTC TGAG GAAGTTGCCCGCC TTTTAATCTTTTAAT TERM 436 453578 - 453606 + T 100 -11.8 -4.56729 | gap 1, opp_overlap 453573 453572 453578, overlap 453573 TTGAAAAAACTTAAA GGCGGGCGA-TTC TGAG GAAGTTGCCCGCC TTTTAATCTTTTAAT Csac_0408 455198 - 453654 - | alpha amylase, catalytic region TERM 437 455317 - 455302 - R 100 -9 -6.04378 | opp_overlap 455299 455302 455304 AAATCACAAAAAAAA GAGGGA TAAA TCCCTC TACTTGTTCTCTTCA TERM 438 455302 - 455317 + r 74 -9 -3.03429 | opp_overlap 455302, overlap 455299 455304 AAATCACAAAAAAAA GAGGGA TAAA TCCCTC TACTTGTTCTCTTCA Csac_0409 455559 - 455317 - | hypothetical protein Csac_0410 457821 - 455563 - | spermine synthase TERM 439 456224 - 456198 - G 72 -8 -3.80533 | opp_overlap 456206, overlap 456196 456201 456216 AAAAGAAGATAAATA CCAGCACAGGTG AAA CACCTTTGCTAA AGTCATAAAAGTATG TERM 440 456221 - 456201 - G 76 -9.7 -2.95284 | opp_overlap 456206, overlap 456198 456196 456216 AGAAGATAAATACCA GCACAGGTG AAA CACCTTTGC TAAAGTCATAAAAGT TERM 441 457736 - 457723 - G 75 -5.3 -4.88407 | CGATGTAATTAAAAA GGTAT AATG ATACC AAAATAAGGCAGAAT Csac_0411 458589 - 457858 - | cytochrome c biogenesis protein, transmembrane region TERM 442 458531 - 458493 - G 74 -8.3 -3.75897 | opp_overlap 458495, overlap 458495 AATCTCTAATCGAAA CACCTGTGATAAGTGAA AAATA TACACTTATCATAGGTA CTATGCAGGGGGAAA TERM 443 458495 - 458529 + g 78 -10.9 -2.62184 | opp_overlap 458493 458495 TCTCTAATCGAAACA CCTGTGATAAGTGAA AAATA TACACTTATCATAGG TACTATGCAGGGGGA TERM 444 458529 - 458495 - G 73 -8.7 -3.46068 | opp_overlap 458495, overlap 458493 TCTCTAATCGAAACA CCTGTGATAAGTGAA AAATA TACACTTATCATAGG TACTATGCAGGGGGA Csac_0412 459184 - 458603 - | hypothetical protein TERM 445 459339 - 459318 - H 91 -11.7 -3.50721 | opp_overlap 459317, overlap 459313 459316 AATTAAGCAAGAAGA CTCCATCTT CTAC AAGATGGAG ATGAATTGCTAAAAA TERM 446 460017 - 460040 + G 76 -6 -4.62783 | overlap 460018 GTTGATACCATCGGG ACTGCCTTTT TGAT AGAAGGCAGG TTTTTAAAATCAGTC TERM 447 460018 - 460039 + G 76 -9.5 -3.37188 | overlap 460017 TTGATACCATCGGGA CTGCCTTTT TGAT AGAAGGCAG GTTTTTAAAATCAGT Csac_0413 459384 - 460601 + | IS605 family transposase OrfB TERM 448 460644 - 460629 - f 71 -9 -2.52464 | opp_overlap 460626 CTTCTCGCGAAGCCA CCACCT CTTT AGGTGG ATGGTAGTTCACTTA Csac_0414 460797 - 461420 + | methyltransferase type 11 TERM 449 461416 - 461456 + T 78 -2 -5.86465 | gap 1, opp_overlap 461418 461424, overlap 461424 TTGCAAAGCCTATAA AATAATAAGGGATTGGG CTTATCTT CCCAACCCCTT-TTATC TTTTTTTATCTTATT TERM 450 461454 - 461418 - T 78 -6.8 -4.44974 | gap 1, opp_overlap 461416 461424, overlap 461424 GCAAAGCCTATAAAA TAATAAGGGATTGGG CTTATCTT CCCAACCCCTT-TTA TCTTTTTTTATCTTA TERM 451 461424 - 461449 + T 82 -6.1 -5.11475 | opp_overlap 461418 461424, overlap 461416 CCTATAAAATAATAA GGGATTGGG CTTATCTT CCCAACCCC TTTTATCTTTTTTTA TERM 452 461449 - 461424 - T 83 -8.3 -4.26938 | opp_overlap 461424 461416, overlap 461418 CCTATAAAATAATAA GGGATTGGG CTTATCTT CCCAACCCC TTTTATCTTTTTTTA Csac_0415 462739 - 461462 - | methyl-accepting chemotaxis sensory transducer TERM 453 462316 - 462327 + g 71 -4.4 -4.88388 | overlap 462305 CAATTGCAGCTGCTG CATC TTCA GATG TTTTTGTGACCTTCT Csac_0416 462913 - 464160 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 454 464176 - 464217 + T 71 -3 -5.21709 | opp_overlap 464182, overlap 464182 ACCAAGAAAAAATTA AAAAAAGCCTGTCTGC TTTGTTTTTT GCAGACAGGCTTTAAC TTTTTTGCTGTAGCA TERM 455 464182 - 464211 + T 93 -10.8 -4.06778 | opp_overlap 464182, overlap 464176 AAAAAATTAAAAAAA GCCTGTCTGC TTTGTTTTTT GCAGACAGGC TTTAACTTTTTTGCT TERM 456 464211 - 464182 - T 100 -10.8 -5.88061 | opp_overlap 464182 464176 AAAAAATTAAAAAAA GCCTGTCTGC TTTGTTTTTT GCAGACAGGC TTTAACTTTTTTGCT Csac_0417 464774 - 464241 - | hypothetical protein Csac_0418 464941 - 465606 + | two component transcriptional regulator TERM 457 466010 - 466000 - g 73 -5.4 -4.61747 | opp_overlap 466001, overlap 466001 GTAATAACTATAAAA CCAT ATT ATGG ATATGCTTTGAACAT Csac_0419 465628 - 466881 + | integral membrane sensor signal transduction histidine kinase Csac_0420 467030 - 468136 + | oxidoreductase domain-containing protein TERM 458 468396 - 468386 - g 70 -6.8 -4.07568 | opp_overlap 468386 468385 TTTCTGCGCCTAAAA CTGC TTT GCAG ATATTTGTAACAATA Csac_0421 468304 - 468852 + | nucleoside recognition domain-containing protein Csac_0422 468849 - 469373 + | nucleoside recognition domain-containing protein TERM 459 469372 - 469406 + T 74 -5.8 -4.64861 | opp_overlap 469377, overlap 469377 AAAACGGCTTAAAAT AAAAAGGCTGAAGT AGGAAAA ACTTCAGCCTTTCA TTTATTTTACGCAGC TERM 460 469401 - 469377 - T 100 -10.1 -5.45802 | opp_overlap 469372 469377 GGCTTAAAATAAAAA GGCTGAAGT AGGAAAA ACTTCAGCC TTTCATTTATTTTAC TERM 461 469377 - 469401 + T 93 -10.1 -4.32131 | opp_overlap 469377, overlap 469372 GGCTTAAAATAAAAA GGCTGAAGT AGGAAAA ACTTCAGCC TTTCATTTATTTTAC Csac_0423 470054 - 469413 - | cobalamin B12-binding domain-containing protein TERM 462 469624 - 469645 + g 81 -7.3 -4.58395 | opp_overlap 469614 469631, overlap 469631 AGCAAGGCTGACATT GCAACAATC TGTG GATTGTAGC TTTTTACAGCCTCAC Csac_0424 473066 - 470073 - | hypothetical protein TERM 463 470430 - 470416 - G 83 -8.6 -4.19238 | opp_overlap 470397 TTTGTAATCTCAAAA GAGCTT TTC AAGCTC ATAGAGCCAACATAA TERM 464 470564 - 470580 + g 78 -3.6 -5.32608 | GATAAATAGCTTCTA CCTCAG TTGGT CTGTGG TTTTTTGGGTTTTTT TERM 465 470729 - 470743 + g 90 -2.8 -6.10489 | overlap 470731 AAAAGTTCTGGTCGG GCGAAA AGC TTTCAC TTTTTTTTTCAAATT TERM 466 470922 - 470896 - G 82 -6.6 -4.95155 | overlap 470899 GGGAGATTATAAAAA TGATTGTGCCAA ACT TGGGCACAATAA CAATCTTCAAACACT TERM 467 470919 - 470899 - G 70 -8.3 -3.34705 | overlap 470896 AGATTATAAAAATGA TTGTGCCAA ACT TGGGCACAA TAACAATCTTCAAAC TERM 468 471063 - 471053 - G 74 -8.2 -3.82202 | opp_overlap 471052 TATTGTCAAATACAA CGCC CGA GGCG ACATTTTTTGTGTTC TERM 469 472340 - 472329 - G 81 -4.4 -5.27779 | opp_overlap 472329 CGCAACATCAAAAAA GTCA AATC TGAC TTTGTGGTAATTGCC TERM 470 472953 - 472933 - G 70 -2.5 -5.15634 | overlap 472934 GAGTGCATGAAAAAA CCACCATAA CCT TTTTGGTGC ATCTCAGTTATCTCG Csac_0425 473738 - 473097 - | class II aldolase/adducin family protein Csac_0426 473978 - 475708 + | alpha amylase, catalytic region Csac_0427 475817 - 476725 + | binding-protein-dependent transport systems inner membrane component Csac_0428 476725 - 477594 + | binding-protein-dependent transport systems inner membrane component Csac_0429 477648 - 479270 + | alpha-glucan phosphorylase TERM 471 479420 - 479402 - g 76 -2.4 -5.5604 | TGAAGCAATAAAAAA GCTTGG TTATGTT CCAAAC GCAAATGCAAAGGGG Csac_0430 479277 - 480299 + | alanine racemase Csac_0431 480442 - 481647 + | extracellular solute-binding protein TERM 472 481696 - 481718 + G 100 -12 -5.82036 | GAAATTGTGAGTGTG GGCAGCAGAA TTT TCCTGCTGCC TTTTTTGTTTGTTGT Csac_0432 481687 - 482070 + | hypothetical protein Csac_0434 482351 - 482986 + | hypothetical protein TERM 473 483620 - 483606 - g 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 474 484157 - 484142 - g 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_0435 483021 - 484250 + | transposase, mutator type TERM 475 484624 - 484641 + G 76 -4.9 -5.00616 | gap 1, opp_overlap 484624 AGTTGTAGAAGAGAG CTAC-ACC AGT GGTTGTAG TTTTTTAGACCGAGA Csac_0436 484247 - 484846 + | IS605 family transposase OrfB Csac_0437 485260 - 486195 + | hypothetical protein TERM 476 486292 - 486268 - f 100 -16.5 -4.73682 | overlap 486269 CCTTATAATATAAAA CTGTCGCTGCG AAA CGCAGCGACAA AAACAAAAGATAAAA TERM 477 486291 - 486269 - f 100 -17.8 -3.43486 | overlap 486268 CTTATAATATAAAAC TGTCGCTGCG AAA CGCAGCGACA AAAACAAAAGATAAA TERM 478 486370 - 486350 - f 73 -4.6 -5.1166 | opp_overlap 486350, overlap 486351 486352 TATTAAAATTAAAAA TCGTCGCC GGTGA GGCGACAG GTAGTTAGGAAATTA TERM 479 486369 - 486351 - f 75 -8.1 -3.65369 | opp_overlap 486350, overlap 486350 486352 ATTAAAATTAAAAAT CGTCGCC GGTGA GGCGACA GGTAGTTAGGAAATT TERM 480 486368 - 486352 - f 74 -9.4 -2.77595 | opp_overlap 486350, overlap 486351 486350 TTAAAATTAAAAATC GTCGCC GGTGA GGCGAC AGGTAGTTAGGAAAT TERM 481 487087 - 487069 - f 74 -9.6 -2.7644 | opp_overlap 487062, overlap 487068 AGTTAAGCGTGAAAG CCTTAGGC TCA ACCTAAGG ATTGCGCTTAATACT TERM 482 487986 - 487967 - f 72 -9.2 -2.65808 | overlap 487964 AGTCGTAACAAGGTA GCCGTACG GGAA CGTGCGGC TGGATCACCTCCTTT TERM 483 488421 - 488449 + F 79 -10.3 -2.57132 | opp_overlap 488422, overlap 488420 AGGGGAGGAGCCCAA ACCATCGCAAGTT TTT AGCTTGCGGTGGG GTTGTAGGACAGGAG TERM 484 488448 - 488422 - f 82 -9.4 -3.62096 | opp_overlap 488421 488420 GGGGAGGAGCCCAAA CCATCGCAAGTT TTT AGCTTGCGGTGG GGTTGTAGGACAGGA TERM 485 488649 - 488633 - f 76 -8.7 -3.41222 | overlap 488631 CTCCAAGGCTAAATA CTACCGG TGA CCGATAG TGGACAAAGTACCGT TERM 486 488695 - 488684 - f 76 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAGCCT TERM 487 489691 - 489670 - f 72 -8.7 -3.10894 | opp_overlap 489686 AGGAGGAGCAGGCAA CCGGGGT GTTGGTTG ACCCCGG CCAAGCGGCGAGCGG TERM 488 490096 - 490082 - f 77 -7.8 -4.09685 | overlap 490095 GGGGAGGGGTGAAAA GCTCCG AAC CGAAGC CCCAGTGAACGGCGG TERM 489 490433 - 490447 + F 70 -7.1 -3.64822 | CCGAGTGATGGGACA CTGCC AGGTG GGCAG TTTGACTGGGGCGGT TERM 490 490660 - 490644 - f 79 -7.3 -4.4715 | overlap 490648 GCTCAACGGATAAAA GTTACCC CGG GGATAAC AGGCTGATCTCCCCC Csac_0438 491601 - 492272 + | beta-phosphoglucomutase family hydrolase Csac_0439 492286 - 494556 + | Kojibiose phosphorylase TERM 491 494563 - 494602 + F 100 -16 -4.85782 | opp_overlap 494560 494561 494558, overlap 494565 ATCATATAAACAGCT TTCCCTGTGAAAAGCA AAGATGAG TGCTTTTCACAGGGGA TTTGTTTTTCGAAAA TERM 492 494565 - 494600 + F 100 -16.4 -2.69725 | opp_overlap 494560 494561 494558, overlap 494563 CATATAAACAGCTTT CCCTGTGAAAAGCA AAGATGAG TGCTTTTCACAGGG GATTTGTTTTTCGAA Csac_0440 494795 - 496021 + | extracellular solute-binding protein Csac_0441 496119 - 497006 + | binding-protein-dependent transport systems inner membrane component Csac_0442 497067 - 497861 + | binding-protein-dependent transport systems inner membrane component Csac_0443 497949 - 498968 + | alanine racemase TERM 493 499044 - 498997 - T 76 -6.5 -4.57569 | gap 1, opp_overlap 498998 498999, overlap 498998 498999 TTATGTTTCTAAAAA CTTTAAGGCTGTATGGGG TTTTTTGAGTGTC CCCCAAACAGCCTT-AAG TTATTTGTAGAGGCG TERM 494 498998 - 499044 + T 85 -8.9 -4.06419 | opp_overlap 498997 498998 498999, overlap 498999 TATGTTTCTAAAAAC TTTAAGGCTGTATGGGG TTTTTTGAGTGTC CCCCAAACAGCCTTAAG TTATTTGTAGAGGCG TERM 495 498999 - 499043 + T 81 -10.2 -3.0353 | opp_overlap 498999 498997 498998, overlap 498998 ATGTTTCTAAAAACT TTAAGGCTGTATGGGG TTTTTTGAGTGTC CCCCAAACAGCCTTAA GTTATTTGTAGAGGC TERM 496 499043 - 498999 - T 77 -10.2 -2.60211 | opp_overlap 498998 498999, overlap 498997 498998 ATGTTTCTAAAAACT TTAAGGCTGTATGGGG TTTTTTGAGTGTC CCCCAAACAGCCTTAA GTTATTTGTAGAGGC Csac_0444 501416 - 499071 - | Kojibiose phosphorylase Csac_0445 501646 - 502200 + | rubrerythrin Csac_0446 503278 - 502289 - | aldo/keto reductase TERM 497 503406 - 503396 - g 90 -4 -5.94597 | GAATATGAAAAAAAA CTAT AAT ATAG TTAACAACACTTATA TERM 498 503629 - 503639 + G 75 -5.4 -4.86621 | CATCGCTTTCTGCAA TGCT CAC AGCA TTTTTGATTACAGAT Csac_0447 503379 - 503918 + | hypothetical protein Csac_0448 503920 - 504792 + | metalloenzyme domain-containing protein TERM 499 504939 - 504929 - g 81 -5.4 -5.08824 | GGCGTATGCAAAAAA CTTC TCA GAAG ATGAACTAATCAGGG TERM 500 506454 - 506439 - g 74 -4.8 -4.77036 | TCGCAGTACCAAAAA GTAAAA GAAA TTTTAC ACTCACGTAATATTG TERM 501 506738 - 506726 - g 74 -2.7 -5.26316 | opp_overlap 506732 CGATTTGATAAAAAA TCTTG GGG CAAAA AGACTTTGTCTTTCG Csac_0449 504804 - 507107 + | peptidase U32 Csac_0450 507111 - 508232 + | Beta tubulin, autoregulation binding site TERM 502 509882 - 509896 + G 70 -6.4 -4.07687 | ACACTGCCGGAAATG GTGCTA TCT TGGCAC TTTTGAGCAGCAAGT Csac_0451 508234 - 510021 + | ferredoxin TERM 503 510217 - 510234 + G 70 -5.7 -4.4078 | overlap 510206 510205 TTTTGATATTATACT CTATAAA ATCG TTTATAG TTTTCATTCCGGCAG Csac_0452 510036 - 510740 + | hypothetical protein TERM 504 510861 - 510873 + G 71 -4.9 -4.62471 | ATTTATCATAACAGG TACTA CTT TAGTA TTTTTGAGAATTGAA Csac_0453 510802 - 511512 + | cell wall hydrolase/autolysin Csac_0454 511516 - 512910 + | dipeptidase, putative Csac_0455 513612 - 512983 - | hypothetical protein TERM 505 513990 - 513972 - g 70 -3.1 -5.02323 | CGAGTATAAAGAAAA CCATTCT TTTTC AGCATGG ATATTCAAGATTGCT Csac_0456 513778 - 514320 + | ECF subfamily RNA polymerase sigma-24 factor Csac_0457 514313 - 515686 + | hypothetical protein Csac_0458 515739 - 516047 + | anti-sigma-factor antagonist Csac_0459 516065 - 516421 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Csac_0460 516426 - 517199 + | FliA/WhiG family RNA polymerase sigma factor TERM 506 517396 - 517361 - f 91 -12 -3.48395 | opp_overlap 517362, overlap 517362 AGTGCTCGCAGATAA TCCCCTTTTTAAACCT GAAA AGGTTTGAAAAGGGGT TTTTATTTTTGCTTT TERM 507 517395 - 517362 - f 100 -15.5 -2.68823 | opp_overlap 517362, overlap 517361 GTGCTCGCAGATAAT CCCCTTTTTAAACCT GAAA AGGTTTGAAAAGGGG TTTTTATTTTTGCTT TERM 508 517362 - 517395 + F 100 -17.7 -5.67529 | opp_overlap 517361 517362 GTGCTCGCAGATAAT CCCCTTTTTAAACCT GAAA AGGTTTGAAAAGGGG TTTTTATTTTTGCTT Csac_0461 517549 - 517965 + | hemerythrin-like metal-binding protein TERM 509 517992 - 518016 + T 100 -10 -6.04953 | opp_overlap 517992 CGGATATTGCAAAAA GCTGTCCACC GCAAG GGTAGACAGC TTTTTTTGTTTATAT TERM 510 518016 - 517992 - T 100 -12.2 -4.64766 | opp_overlap 517992 CGGATATTGCAAAAA GCTGTCCACC GCAAG GGTAGACAGC TTTTTTTGTTTATAT Csac_0462 518859 - 518026 - | hypothetical protein TERM 511 519037 - 519023 - RH 77 -4.2 -5.38398 | AGAAAAATAGAAAAA CTACCA GGA TGGGAG GACAGCCTACTATGA Csac_0464 520564 - 520130 - | hypothetical protein Csac_0463 519049 - 520185 + | hypothetical protein TERM 512 521031 - 521014 - g 74 -4.1 -5.15969 | opp_overlap 521002 521014 GCTGAAGCTAAAAAA GCTTCTT GTTG AAGATGC TTTTAGGCGAATAGG Csac_0465 520727 - 522085 + | RNA methyltransferase Csac_0466 522386 - 522616 + | hypothetical protein Csac_0467 522636 - 523178 + | ECF subfamily RNA polymerase sigma-24 factor TERM 513 523340 - 523328 - g 77 -2.6 -5.56372 | AAAGCAAAACAAAAA GCCC GGTTG GAGC AATGGCTTTTTTGCG Csac_0468 523168 - 523863 + | hypothetical protein TERM 514 524710 - 524698 - g 71 -4.9 -4.6645 | CATATACATACAAAA TGTTT AAT AAACA ACAAATAGAATTATA Csac_0469 524457 - 525323 + | hypothetical protein Csac_0470 525346 - 525801 + | hypothetical protein Csac_0471 526780 - 525833 - | transposase, IS4 family protein TERM 515 527252 - 527291 + H 80 -7.2 -4.6951 | opp_overlap 527252 527249 GGAATTAAAAAGGTA GGGCATTGGAAATAAGAC TCAT GTTCTATTTCCAACCCCC TTTATTTTAAATAAT TERM 516 527291 - 527252 - H 75 -9.4 -2.88788 | opp_overlap 527252, overlap 527249 GGAATTAAAAAGGTA GGGCATTGGAAATAAGAC TCAT GTTCTATTTCCAACCCCC TTTATTTTAAATAAT Csac_0472 527358 - 528023 + | hypothetical protein TERM 517 528378 - 528355 - f 100 -6.7 -5.54338 | opp_overlap 528354 CAACGAAAAGAAAAA TTCGGCATG ACAACA CCTGCCGAA CTTAAATAGAGGCTG Csac_0473 528670 - 530076 + | integrase catalytic subunit Csac_0474 530371 - 530865 + | IstB ATP binding domain-containing protein TERM 518 531766 - 531754 - g 73 -3.4 -5.10497 | opp_overlap 531742, overlap 531742 AACCGAGGGAAAAAA TCCA TCGTT TGGA GATGCGTCAGCAGAT TERM 519 531984 - 531965 - g 76 -6.4 -4.46155 | CAGATATTGATAAAA GGCTGGAA GAGC TTCAAGCC GAGTTGATCCAATTG Csac_0475 530959 - 532266 + | recombinase TERM 520 532690 - 532677 - g 90 -3.9 -5.79526 | ATATGGCAAAAAAAA TTCAA CCAA TTGAA AGATGCGACTGTGAT Csac_0476 532664 - 533038 + | regulatory protein, ArsR Csac_0477 533052 - 535424 + | heavy metal translocating P-type ATPase TERM 521 535441 - 535481 + F 90 -12.2 -3.21703 | gap 1, opp_overlap 535443, overlap 535440 535437 535435 535443 ACTACATGATTTATT AACCCCTTGA-TTTATCTT CTCA AAGATAAAATCAAGGGGTA TCTGTATTTAAATTT TERM 522 535479 - 535443 - f 100 -14.8 -3.1994 | gap 1, opp_overlap 535441 535440 535437 535435 535443 TACATGATTTATTAA CCCCTTGA-TTTATCTT CTCA AAGATAAAATCAAGGGG TATCTGTATTTAAAT TERM 523 535443 - 535479 + F 100 -14.8 -3.15659 | gap 1, opp_overlap 535443, overlap 535441 535440 535437 535435 TACATGATTTATTAA CCCCTTGA-TTTATCTT CTCA AAGATAAAATCAAGGGG TATCTGTATTTAAAT Csac_0478 535511 - 535975 + | lipoprotein signal peptidase TERM 524 537158 - 537144 - g 71 -4.2 -4.72986 | GAGTTTCAGGAAAAA CTGTCA AAG TGTCAG AAGAACTCTCAAAGA Csac_0479 536466 - 537452 + | IS605 family transposase OrfB Csac_0480 538654 - 537425 - | transposase, mutator type TERM 525 537518 - 537533 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 526 538055 - 538069 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA Csac_0481 538792 - 539112 + | hypothetical protein Csac_0483 541691 - 542176 + | peptidase M48, Ste24p TERM 527 543024 - 543013 - g 71 -4.4 -4.7173 | GACGATATTCAAAAA GTTC ATTT GAAC TATACAGGTGGTACA Csac_0484 542707 - 544062 + | hypothetical protein Csac_0485 544062 - 545594 + | hypothetical protein TERM 528 545901 - 545888 - g 72 -3.9 -5.03747 | opp_overlap 545888, overlap 545877 AAAGTTCTTAAAAAA GAAAA GGAG TTTTC TCTATATTTACATCC TERM 529 546451 - 546468 + G 75 -5.6 -4.87273 | AAAATTGGGGCGTGA TGCTCA AAGGAA TGAGCA TTTTTATACACTCTT Csac_0486 545591 - 547831 + | hypothetical protein Csac_0487 547874 - 549256 + | hypothetical protein Csac_0488 549263 - 549856 + | hypothetical protein Csac_0489 549857 - 551875 + | hypothetical protein TERM 530 551954 - 551909 - T 85 -10.8 -3.31322 | gap 1, opp_overlap 551910 551922, overlap 551910 551922 TTCAAGTGTTTACAA CTTTAATAAAAAAGCGGAGCA TCTTG TGCCCCGC-TTTTTATTAAAT TTTCCTAAGTTTTAC TERM 531 551953 - 551910 - T 100 -14.3 -2.58579 | gap 1, opp_overlap 551910 551922, overlap 551909 551922 TCAAGTGTTTACAAC TTTAATAAAAAAGCGGAGCA TCTTG TGCCCCGC-TTTTTATTAAA TTTTCCTAAGTTTTA TERM 532 551910 - 551953 + T 100 -12.8 -4.34771 | gap 1, opp_overlap 551909 551910 551922, overlap 551922 TCAAGTGTTTACAAC TTTAATAAAAAAGCGGAGCAT CTT GTGCCCCGC-TTTTTATTAAA TTTTCCTAAGTTTTA TERM 533 551942 - 551922 - T 100 -10.4 -5.4756 | opp_overlap 551922 551910, overlap 551910 551909 AACTTTAATAAAAAA GCGGAGCA TCTTG TGCCCCGC TTTTTATTAAATTTT TERM 534 551922 - 551942 + T 95 -8.9 -5.17507 | opp_overlap 551910 551909 551922, overlap 551910 AACTTTAATAAAAAA GCGGAGCAT CTT GTGCCCCGC TTTTTATTAAATTTT Csac_0490 554482 - 551966 - | 1A family penicillin-binding protein TERM 535 552815 - 552842 + g 76 -4.2 -5.1167 | gap 1, overlap 552800 552816 CACCTTTCTTTTGTA AGGTGTT-CTTTC AAA GAGAGTAACACCA TTTTTGTCTTCAATT TERM 536 552816 - 552841 + g 72 -7.7 -3.65375 | gap 1, overlap 552800 552815 ACCTTTCTTTTGTAA GGTGTT-CTTTC AAA GAGAGTAACACC ATTTTTGTCTTCAAT Csac_0491 554665 - 555741 + | biotin synthase Csac_0492 555848 - 556543 + | hypothetical protein TERM 537 556547 - 556578 + T 78 -2.2 -5.85244 | opp_overlap 556546, overlap 556564 GTTTTAAAATAAAAG GGGTTGCCGC CAAATGTCAAAA GTGGCACCCC TTTTTTGTTTTAATT Csac_0493 558009 - 556588 - | major facilitator transporter TERM 538 558454 - 558442 - g 85 -2.7 -5.87996 | GAATGAAGAAAAAAA GAAAA TTA TCTTC ACAGCTCATTTCAGG Csac_0494 558218 - 558868 + | hypothetical protein Csac_0495 558946 - 559521 + | hypothetical protein TERM 539 559572 - 559536 - T 75 -9.5 -2.95779 | opp_overlap 559534 559535 559531, overlap 559535 ACTTAAAAAAGTAAG GTGGCAAGGTATGGA CTTACTT TTCGTACCTTGCCAC AACTCTTGTTGAAAT Csac_0496 559962 - 559552 - | 7-cyano-7-deazaguanine reductase TERM 540 560707 - 560661 - g 100 -7.4 -5.44119 | overlap 560669 GGCATGTGAAAAAAA CTTTCAAAGCCCTGCTTCTAAC TTT GTCACAAACAGAGCTCAAAAAG AAAGCATTCCTGTTC TERM 541 560699 - 560669 - g 72 -7.6 -3.71363 | overlap 560661 AAAAAAACTTTCAAA GCCCTGCTTCTAAC TTT GTCACAAACAGAGC TCAAAAAGAAAGCAT Csac_0497 560128 - 561042 + | helix-turn-helix domain-containing protein TERM 542 561222 - 561204 - T 93 -8.8 -4.75518 | CAGAGAAAATTAAAA GGCGGG TGTGCTG CCCGCC TCGCAAGGGAAATAT Csac_0498 561488 - 561243 - | redox-active disulfide protein 2 Csac_0499 562491 - 561520 - | permease Csac_0500 562794 - 562498 - | regulatory protein, ArsR TERM 543 562802 - 562843 + H 85 -8.4 -4.61633 | gap 1, opp_overlap 562808 562835, overlap 562825 562826 562835 ATAGACATATTTTTC GCACAA-TCTTTCTTTT TTCAGCTTT AAAAGAAAGAGTTGTGC TTTTTGCACCTCTCT TERM 544 563290 - 563261 - H 79 -3.5 -5.63236 | opp_overlap 563266, overlap 563266 ATGTAAAAATAAAAA TCAAACCGCAGCT TTTA AGCTGTGGTTTTT GTTTTTTGTGTGGTA TERM 545 563285 - 563266 - H 82 -7.8 -4.48685 | opp_overlap 563266, overlap 563261 AAAATAAAAATCAAA CCGCAGCT TTTA AGCTGTGG TTTTTGTTTTTTGTG TERM 546 563266 - 563285 + H 100 -10 -5.8096 | opp_overlap 563266 563261 AAAATAAAAATCAAA CCGCAGCT TTTA AGCTGTGG TTTTTGTTTTTTGTG Csac_0501 563356 - 563556 + | hypothetical protein Csac_0502 563557 - 563718 + | hypothetical protein TERM 547 563753 - 563783 + T 75 -4.8 -4.94992 | opp_overlap 563761, overlap 563761 AACAAGCAGGAATAA GTTTAGAAGAGTTT TTA GAACTCCTTTAAGC TTTTTGTCAATTTGC Csac_0503 564568 - 564260 - | two component LuxR family transcriptional regulator TERM 548 564629 - 564639 + H 72 -2.6 -5.32882 | CTACCAATGCTTTTA TTTT ACT AAAA TTTTTTATAATAATG Csac_0504 564746 - 565222 + | hypothetical protein TERM 549 565406 - 565386 - T 70 -4.1 -5.11881 | opp_overlap 565391, overlap 565387 AAAGAAAAAAAAGAA GGAAATTAT TCA ATAATTTCA TAACAGGTAAACCAC TERM 550 565405 - 565387 - T 73 -7.6 -3.61638 | opp_overlap 565391, overlap 565386 AAGAAAAAAAAGAAG GAAATTAT TCA ATAATTTC ATAACAGGTAAACCA Csac_0506 567964 - 565994 - | hypothetical protein TERM 551 566637 - 566607 - G 71 -4.9 -4.68994 | ACTATTATCCAAAAA CAACTAATAGC TGGTGTAAG GCTATTAGTTA GAGAGTTTGAAGTTA TERM 552 566821 - 566833 + g 91 -4.9 -5.88565 | TGGCTGAGTTCTTAT CAAAA AAA TTTTG TTTTTTTATTCTGAA TERM 553 567356 - 567369 + g 72 -3.9 -5.00412 | TATCCCAATGATAGT CAAAA GCCA TTTTG TTTTTGGTTCTCTTT Csac_0507 568730 - 567957 - | ABC transporter related TERM 554 568827 - 568790 - R 85 -4.9 -5.58179 | opp_overlap 568790 CATTATAACAAAAAA GAGAAAATGCTTGCC TTATTTTT GGCTTACATTTTCTC TTCTCAATCTTACAT Csac_0508 569878 - 568868 - | integral membrane sensor signal transduction histidine kinase Csac_0509 570561 - 569890 - | two component transcriptional regulator Csac_0510 571326 - 570691 - | two component LuxR family transcriptional regulator TERM 555 570996 - 571010 + g 70 -6.4 -4.13014 | opp_overlap 570996 TAGAATTCACAATAT GCTTTG CAT CAGAGC TTTTAAGGATGTACC Csac_0511 572431 - 571313 - | putative signal transduction histidine kinase TERM 556 572288 - 572276 - G 75 -9.1 -3.54919 | opp_overlap 572275 572287, overlap 572266 572264 572263 AATCAGCTCTGCAAA GGCAG CAG CTGCC GTATGGTATATGGAT Csac_0512 572713 - 573273 + | hypothetical protein TERM 557 573282 - 573266 - T 75 -5.1 -4.94243 | opp_overlap 573266 573265 TCAAAAAAAGTAAAA GCACC TGAAGAG GGTGC CTTTTTACAAATTTA Csac_0513 574407 - 573295 - | ABC-2 type transporter Csac_0514 575534 - 574389 - | ABC-2 type transporter TERM 558 575475 - 575495 + g 75 -6.9 -4.18401 | overlap 575480 CATTATAGAAAGCAG GGGAATGCT CAT AGCATTTTC TTTTAAAGTATATAA TERM 559 575480 - 575490 + g 81 -5.4 -5.09259 | overlap 575475 TAGAAAGCAGGGGAA TGCT CAT AGCA TTTTCTTTTAAAGTA Csac_0515 576483 - 575518 - | ABC transporter related TERM 560 575660 - 575671 + g 74 -3 -5.2696 | AAAGTTTCGACAATC TCTT TTAT AAGA TTTTTTGACTTTTCA TERM 561 576079 - 576093 + g 70 -2.8 -5.20216 | overlap 576081 TTTCATCCCGCCAGA TAGGTT TTT GACCTG TTTTTTGATGCTATC TERM 562 576847 - 576868 + r 100 -11.6 -5.03145 | opp_overlap 576847 GAATATATAGAATAA GAGCCCTC AAAATA GAGGGCTC TTTTTTGAGAACTTA TERM 563 576868 - 576847 - R 100 -11.6 -3.9679 | opp_overlap 576847 GAATATATAGAATAA GAGCCCTC AAAATA GAGGGCTC TTTTTTGAGAACTTA TERM 564 577931 - 577942 + r 70 -4.4 -4.82128 | GCAATTTAGGTCTGC CCAA AAAT TTGG TTTTATCTTTACTCC Csac_0518 579055 - 578678 - | hypothetical protein Csac_0519 579919 - 579182 - | hypothetical protein TERM 565 580064 - 580076 + H 90 -4.9 -5.85178 | TTTGAAACTTCTTTA TGTTA AAA TAACA TTTTTTTTGGATATT Csac_0520 580145 - 580633 + | MarR family transcriptional regulator Csac_0521 580626 - 582362 + | ABC transporter related TERM 566 583968 - 583954 - g 70 -8.6 -3.03124 | TCTGACCCTGCAATA CTCATC TTA GATGAG GCGACAAGCAATATC Csac_0522 582355 - 584202 + | ABC transporter related TERM 567 584641 - 584610 - f 100 -12.4 -5.30575 | opp_overlap 584618, overlap 584614 TAAAAACTTAAAAAA GTATTAAACGCTCC ACTT GGAGCGTTTAGCAC AAAACTCTAAAAAAT TERM 568 584637 - 584614 - f 100 -14 -2.63785 | opp_overlap 584618, overlap 584610 AACTTAAAAAAGTAT TAAACGCTCC ACTT GGAGCGTTTA GCACAAAACTCTAAA TERM 569 584618 - 584633 + F 85 -10.4 -3.53224 | opp_overlap 584614 584610 TAAAAAAGTATTAAA CGCTCC ACTT GGAGCG TTTAGCACAAAACTC Csac_0523 584682 - 584906 + | hypothetical protein TERM 570 584938 - 584977 + F 91 -12.2 -3.3972 | opp_overlap 584933 584932 TTTTTCAAACTCTTT TGCAAGGGGTCAGCTTAA ATCA TAAAGACGACCCCTTGCA TTAATAATTTTATCA TERM 571 585499 - 585514 + GF 85 -2.6 -5.9003 | CTTTTAGTGTTTTAT GTATTT ATTG AAGTAC TTTTTTTGTTAATTT TERM 572 585554 - 585531 - gf 74 -9.8 -2.52464 | TTTTTTGTTAATTTA CTGTTTAAAA TATA TTTTAAACAG TAATACTACATATAG Csac_0524 585055 - 586806 + | hypothetical protein Csac_0525 586760 - 587308 + | hypothetical protein Csac_0526 587346 - 587984 + | ABC transporter related Csac_0527 588634 - 589296 + | hypothetical protein Csac_0528 589316 - 590965 + | RND family efflux transporter MFP subunit TERM 573 591467 - 591455 - g 78 -6.3 -4.7173 | GAGGATACGGAAAAA GCTAT TTA ATAGC CAAAATCCAGTGGGC Csac_0529 590985 - 592172 + | hypothetical protein Csac_0530 593542 - 592292 - | SufBD protein TERM 574 592347 - 592365 + g 91 -9.6 -4.67353 | opp_overlap 592347, overlap 592349 ATATAATTTTCAAGA TGCTTGGG AAG CCCAAGTA TTTTTACATCCATAA TERM 575 592349 - 592363 + g 85 -10 -3.95214 | opp_overlap 592347, overlap 592347 ATAATTTTCAAGATG CTTGGG AAG CCCAAG TATTTTTACATCCAT Csac_0531 594261 - 593521 - | ABC transporter related Csac_0532 594477 - 594803 + | hypothetical protein TERM 576 594837 - 594819 - f 77 -7.5 -4.13304 | opp_overlap 594818 AAAGTACTTTTAAAA TATACCC TATGT GGGTATA ATAATATAGGGGTGA Csac_0533 594861 - 595742 + | thioredoxin-disulfide reductase TERM 577 595802 - 595787 - T 79 -4.7 -5.22039 | TTTAAATTTAAAAAA TGGGA GCTTAT TCCCA GTACATAAGGTTTAA Csac_0534 596144 - 595794 - | hypothetical protein TERM 578 596186 - 596204 + r 84 -5.4 -5.37345 | overlap 596187 TCCAAAAACCTTTTC TTTTTTTG TTT CAAAAAAG TTTTTTCTGCTTAAG TERM 579 596373 - 596330 - R 95 -4.6 -6.28401 | opp_overlap 596334, overlap 596335 CAAAAAATAAAAAAA CAAAAGGGCAACCTTGAAAA GTTT TACTCAAGATTGCCCCTGTC TTAAAATCCACAGAA TERM 580 596368 - 596335 - R 100 -11.1 -5.64328 | opp_overlap 596334, overlap 596330 AATAAAAAAACAAAA GGGCAACCTTGAAAA GTTT TACTCAAGATTGCCC CTGTCTTAAAATCCA Csac_0535 596592 - 596374 - | FmdB family regulatory protein Csac_0536 596876 - 597595 + | iron permease FTR1 TERM 581 598033 - 598020 - g 78 -6.7 -4.65078 | ACATTTGGAAGAAAA CCATC CAAG GATGG TTACAACACCGTGGT Csac_0537 597685 - 599160 + | hypothetical protein TERM 582 599191 - 599167 - T 100 -10.7 -5.2291 | opp_overlap 599167 ATACTATAACAAAAA GGTCCAACTGC GAA GGAGCTGGACC TTTTTGTTCTTTTAA TERM 583 599167 - 599191 + T 100 -8.5 -5.4593 | opp_overlap 599167 ATACTATAACAAAAA GGTCCAACTGC GAA GGAGCTGGACC TTTTTGTTCTTTTAA Csac_0538 601836 - 599203 - | hypothetical protein TERM 584 599538 - 599516 - G 70 -3.4 -4.96646 | opp_overlap 599517, overlap 599517 599524 599525 TGATAGAACGAAAAA TCCAAAATTG AAC CACTTTTGGT TCTTAAAAATACTAT TERM 585 599892 - 599907 + g 71 -4.7 -4.67011 | TGTCGCTTTTGCTCT GAGGT ATTTCA ACCTC TTTTTGAGTGCCATT TERM 586 600851 - 600835 - G 71 -9.5 -2.54523 | CCACACGTCAATTGA TTGCAAG AAA CTTGCAA GCTCACCCTGTGAGA TERM 587 601856 - 601879 + r 85 -9 -4.09285 | ACACTTGCCTCCAGT CTTTTGTGAT GAAA ATCGCAAAAG TTTAGTCTTTTAATC Csac_0539 602588 - 601881 - | PP-loop domain-containing protein Csac_0541 604829 - 603600 - | transposase, mutator type TERM 588 603693 - 603708 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 589 604230 - 604244 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA TERM 590 606054 - 606012 - R 80 -7.1 -4.6644 | gap 1, opp_overlap 606012 606016, overlap 606013 606016 AAGAGACTGCAAAAA TTTAGGGTAACTGCT-CTGC TATC GTAGGAGCAGTTACCCTTAT ATTTTGTTTGCTAAA TERM 591 606012 - 606055 + r 89 -7.7 -4.93877 | gap 2, opp_overlap 606012 606013 606016, overlap 606016 AAGAGACTGCAAAAA T-TTAGGGTAACTGCT-CTGC TATC GTAGGAGCAGTTACCCTTATA TTTTGTTTGCTAAAA TERM 592 606053 - 606013 - R 85 -10.6 -3.3878 | gap 1, opp_overlap 606012 606016, overlap 606012 606016 AGAGACTGCAAAAAT TTAGGGTAACTGCT-CTGC TATC GTAGGAGCAGTTACCCTTA TATTTTGTTTGCTAA TERM 593 606016 - 606050 + r 100 -14.5 -4.13571 | gap 1, opp_overlap 606013 606012 606016, overlap 606012 GACTGCAAAAATTTA GGGTAACTGCT-CTGC TATC GTAGGAGCAGTTACCC TTATATTTTGTTTGC TERM 594 606050 - 606016 - R 90 -12.3 -2.84617 | gap 1, opp_overlap 606016 606012, overlap 606013 606012 GACTGCAAAAATTTA GGGTAACTGCT-CTGC TATC GTAGGAGCAGTTACCC TTATATTTTGTTTGC Csac_0542 606486 - 606163 - | cupin 2 domain-containing protein TERM 595 606573 - 606584 + H 81 -3 -5.79595 | ATTAGAAGATATATT CAAA ATTT TTTG TTTTTTATTTTAACA Csac_0543 606837 - 607931 + | glutamine amidotransferase, class-II TERM 596 608158 - 608140 - g 88 -7.5 -4.82548 | CAAAAAGACAGAAAA TGCATTC AAAGA GAATGCA AACTGGCTACCTTCT Csac_0544 607928 - 609436 + | glutamate synthase (NADPH) TERM 597 609547 - 609533 - g 74 -2.8 -5.28983 | opp_overlap 609533 CTCAAAATACAAAAA GCCT ACTGTAA AGGC TTATGAGCTTATAAA Csac_0545 609417 - 609908 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 598 609962 - 609974 + G 70 -9.1 -3.02511 | TAGGAAACTCTGTTG CAGCC TGT GGCTG TATTGAGGCAATAAG Csac_0546 609931 - 611199 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Csac_0547 611201 - 611956 + | glutamate synthase alpha subunit TERM 599 611973 - 612008 + F 91 -9.8 -4.48869 | AAAAAAATTTTTTAG GTGGCCAGTGGTAA TTTTGTTT TTGCCATTGGCCGC TTTATATTATTTTTA Csac_0548 612048 - 612536 + | metal dependent phosphohydrolase Csac_0550 613292 - 613735 + | transcriptional regulator, TrmB Csac_0551 613799 - 616027 + | ABC transporter related TERM 600 616179 - 616153 - g 73 -3.2 -5.1861 | gap 1, opp_overlap 616153 GGGACTATGAAAAAA CTTATAAGGTA TTTGTC TACCT-ATAAG ATTTCTCTCATAACT TERM 601 617081 - 617061 - g 74 -9.7 -2.64701 | opp_overlap 617052, overlap 617060 617058 AAATATCTCAAACAT CTTGCAGCA GAC TGCTGCATG CGCTGAAAGGGTGTT Csac_0552 616024 - 617904 + | ABC transporter related TERM 602 617956 - 617924 - T 87 -10.7 -3.63589 | opp_overlap 617929, overlap 617929 CAAAAGATGCCTAAA CAAAAGTCCTGGG GGCAGAT CCCAGGACTTTTT TCTTGATTAGACACT TERM 603 617951 - 617929 - T 100 -10.6 -4.87803 | opp_overlap 617929, overlap 617924 GATGCCTAAACAAAA GTCCTGGG GGCAGAT CCCAGGAC TTTTTTCTTGATTAG TERM 604 617929 - 617951 + T 100 -11.3 -5.5604 | opp_overlap 617929 617924 GATGCCTAAACAAAA GTCCTGGGG GCAGA TCCCAGGAC TTTTTTCTTGATTAG TERM 605 618004 - 618028 + T 80 -6.5 -4.8384 | opp_overlap 618008, overlap 618008 TAGAGCTTTTTTGTA TAAATTTGGTG TAA CTCCAAATTTG TTTTTAAATTCTTTA Csac_0553 618807 - 617980 - | helix-turn-helix domain-containing protein TERM 606 618008 - 618024 + g 76 -5.1 -4.91473 | opp_overlap 618008, overlap 618004 GCTTTTTTGTATAAA TTTGGTG TAA CTCCAAA TTTGTTTTTAAATTC TERM 607 620210 - 620179 - H 79 -6.7 -4.67552 | gap 2, opp_overlap 620179 TGCAGTAAAAAACAA GAGGGTTGGCTGACA ATTT TGCC--CCAACCCTC TATTATTATCTTCGC TERM 608 621183 - 621169 - g 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 609 621720 - 621705 - g 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_0556 620584 - 621813 + | transposase, mutator type TERM 610 622193 - 622217 + F 71 -9.3 -2.59431 | opp_overlap 622190 622197, overlap 622190 622197 TGCTAAAACCTATGA CAAATCGGTTC TGT GTGCCGATTTG TACATTATACCCGGC TERM 611 623158 - 623195 + F 86 -4.1 -5.83822 | opp_overlap 623161, overlap 623161 AAAATATCAAAATTA AAAGGAGCTGCCCAA TTATCATT TTGGACAGCCCCTTA TTTTTTTTAACTCTG TERM 612 623161 - 623192 + F 80 -5.8 -4.97383 | opp_overlap 623161, overlap 623158 ATATCAAAATTAAAA GGAGCTGCCCAA TTATCATT TTGGACAGCCCC TTATTTTTTTTAACT TERM 613 623192 - 623161 - f 93 -10.2 -4.71222 | opp_overlap 623161 623158 ATATCAAAATTAAAA GGAGCTGCCCAA TTATCATT TTGGACAGCCCC TTATTTTTTTTAACT TERM 614 624960 - 624970 + G 70 -3.2 -4.89729 | TGCATTTTCTAATAG TGGG AAC TCCA TTTTTCCATTTTGTG Csac_0559 623512 - 624993 + | peptidase C39, bacteriocin processing Csac_0562 626134 - 626601 + | transposase-like protein Csac_0563 627088 - 627339 + | hypothetical protein Csac_0564 627451 - 628914 + | radical SAM domain-containing protein Csac_0565 629200 - 630651 + | cobalamin B12-binding domain-containing protein Csac_0566 630862 - 631533 + | peptidase C39, bacteriocin processing Csac_0567 631521 - 632261 + | ABC transporter related TERM 615 632248 - 632236 - f 80 -6.3 -4.92669 | TATACAAAAAAATAA TTCAC GAG GTGAA AAATATAGAATGAAG Csac_0568 632258 - 633718 + | hypothetical protein Csac_0570 635936 - 634707 - | transposase, mutator type Csac_0569 634412 - 634777 + | hypothetical protein TERM 616 634800 - 634815 + gF 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 617 635337 - 635351 + gF 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA Csac_0571 636068 - 636364 + | hypothetical protein Csac_0572 636361 - 636663 + | hypothetical protein Csac_0573 636748 - 637389 + | hypothetical protein TERM 618 637462 - 637483 + F 100 -7.3 -5.4505 | opp_overlap 637461, overlap 637442 TTATTTCGCAAAAGG GGTATCCTT ATTT GGGGATACC TTTTTTGTTGCAAAC Csac_0574 637586 - 638071 + | hypothetical protein TERM 619 638283 - 638295 + G 70 -3.3 -5.01535 | CAAAGAACTATGACC CTACC AAA GGCAG TTTTTCTACTTATGC TERM 620 638721 - 638735 + G 78 -8.6 -3.71848 | ATTTTGGCTATTCAC CAGTTG AGG CAACTG TTATTGATAGAGAGG Csac_0575 638096 - 639028 + | FliA/WhiG family RNA polymerase sigma factor TERM 621 639479 - 639460 - T 91 -8 -4.94972 | overlap 639454 TATGATAAGCAAAAA CTTTTGTA AGAT TACAAAAG GAAATGTCCCATTTT TERM 622 640770 - 640816 + T 85 -6.7 -4.93877 | gap 1, opp_overlap 640772 640776, overlap 640776 CTAAGAGACTGCAAA AATTTAGGGTAACTGCT-CTGC TATC GTAGGAGCAGTTACCCTTTATA TTTTGTTTGCTAAAA TERM 623 640814 - 640772 - T 80 -7.1 -4.6644 | gap 1, opp_overlap 640770 640776, overlap 640776 AAGAGACTGCAAAAA TTTAGGGTAACTGCT-CTGC TATC GTAGGAGCAGTTACCCTTTA TATTTTGTTTGCTAA TERM 624 640810 - 640776 - T 90 -12.3 -2.84617 | gap 1, opp_overlap 640776 640770, overlap 640772 GACTGCAAAAATTTA GGGTAACTGCT-CTGC TATC GTAGGAGCAGTTACCC TTTATATTTTGTTTG TERM 625 640776 - 640810 + T 100 -14.5 -4.59774 | gap 1, opp_overlap 640772 640776, overlap 640770 GACTGCAAAAATTTA GGGTAACTGCT-CTGC TATC GTAGGAGCAGTTACCC TTTATATTTTGTTTG Csac_0576 641241 - 640918 - | cupin 2 domain-containing protein TERM 626 641073 - 641088 + g 73 -6.2 -4.42238 | TGTATTCCTTATCTT CTGAAA TCAC TTTCAG TTTTCCTTCGAGTAC TERM 627 641328 - 641339 + H 81 -3 -5.79595 | ATTAGAAGATATATT CAAA ATTT TTTG TTTTTTATTTTAACA Csac_0577 641593 - 642687 + | glutamine amidotransferase, class-II TERM 628 642914 - 642896 - g 88 -7.5 -4.82548 | CAAAAAGACAGAAAA TGCATTC AAAGA GAATGCA AACTGGCTACCTTCT Csac_0578 642684 - 644192 + | glutamate synthase (NADPH) Csac_0579 644173 - 644664 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 629 644717 - 644729 + G 70 -9.1 -3.02511 | TAGGAAACTCTGTTG CAGCC TGT GGCTG TATTGAGGCGATAAG Csac_0580 644686 - 645954 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Csac_0581 645956 - 646711 + | glutamate synthase alpha subunit Csac_0582 646799 - 647287 + | metal dependent phosphohydrolase TERM 630 647486 - 647510 + G 86 -6.6 -5.07652 | gap 1 AGGGCTTGTCGGGTG GATTGCAA-CA GCCT TGATTGCAATC TTTTATTTTAACACC Csac_0583 647391 - 648956 + | L-lactate permease-like protein TERM 631 649046 - 649072 + F 86 -3 -6.15828 | opp_overlap 649047, overlap 649047 CTGATTATTAAGATA AGAGCTATTC TAAAAAT GGATAGCTCA TTTTTTTTTAATAAG TERM 632 649047 - 649071 + F 70 -6.5 -4.2787 | opp_overlap 649047, overlap 649046 TGATTATTAAGATAA GAGCTATTC TAAAAAT GGATAGCTC ATTTTTTTTTAATAA TERM 633 649684 - 649664 - g 100 -9.7 -4.97461 | overlap 649658 AAGAAATAGCAAAAA GCCCTCTTT TTA ACAGAGGGC ACAGTGAGAAATTAC Csac_0584 649315 - 649716 + | response regulator receiver protein Csac_0585 650698 - 649793 - | hypothetical protein TERM 634 650854 - 650885 + H 74 -4 -5.13137 | gap 1, opp_overlap 650860, overlap 650860 650882 ACACATTGTAGAGTG TGATAATGTAACTTT TAA AAAGTTACATT-TAA TTTTTAATTTATTTG TERM 635 650860 - 650880 + H 93 -9.9 -4.39092 | opp_overlap 650860, overlap 650854 TGTAGAGTGTGATAA TGTAACTTT TAA AAAGTTACA TTTAATTTTTAATTT TERM 636 650880 - 650860 - H 82 -9.9 -3.32343 | opp_overlap 650854 650860 TGTAGAGTGTGATAA TGTAACTTT TAA AAAGTTACA TTTAATTTTTAATTT TERM 637 652473 - 652454 - g 84 -3.4 -5.65513 | GAGGAAGCAAAAAAA GCAGCAGC GGAC GCAGATGC GGTAATTTTGGTTGT Csac_0586 651005 - 653317 + | glycoside hydrolase family 3 protein TERM 638 654043 - 654055 + G 71 -4.8 -4.69053 | AGTACACCTTATTGG CTGG CCTGT CCAG TTTTATTCAATAATA Csac_0587 653501 - 654199 + | TraX family protein Csac_0588 654295 - 654702 + | DNA polymerase beta subunit Csac_0589 654696 - 655682 + | nifR3 family TIM-barrel protein TERM 639 656873 - 656863 - g 74 -4 -5.09895 | GATTGATGTAAAAAA GAAT ACA ATTC AAATAAAAATGCCAG TERM 640 656894 - 656883 - g 89 -5.8 -5.33026 | CAATTCAAATAAAAA TGCC AGAT GGCA AGGCCTATGATCTTT TERM 641 657210 - 657199 - g 74 -3 -5.28778 | AGGACTTACAAAAAA TGAT TTTT ATCA AGGCATGAAGGTTTT TERM 642 657449 - 657461 + G 74 -4.9 -4.72007 | AGTCTTTCGAAGGGC GATAT AGT ATATC TTTATTTTAATGGCG TERM 643 657979 - 658005 + G 73 -8.9 -3.34715 | gap 1, opp_overlap 657985 657987, overlap 657985 AAAGGATAGGTTTTC GCAAGAGACTGT AGCT ACAGTCT-TTGC TCTTTCAAAAGGGTG TERM 644 657985 - 658000 + G 76 -7.6 -4.00532 | opp_overlap 657985 657987, overlap 657979 TAGGTTTTCGCAAGA GACTGT AGCT ACAGTC TTTGCTCTTTCAAAA Csac_0590 655733 - 658744 + | hypothetical protein TERM 645 658962 - 658973 + G 76 -5.8 -4.61873 | AATACACTTTTGTGA CAGG CCAA CCTG TTTTGCTTTCTGGAA Csac_0591 658790 - 660241 + | S-layer domain-containing protein Csac_0592 660286 - 661704 + | carboxyl-terminal protease TERM 646 661715 - 661748 + F 100 -13.2 -5.46698 | opp_overlap 661715 AGTAAAAATTGGAAA GGGACCTTCTTTGG CAGAAT CCTGAGAAGGTCCC TTTTTTGATTTTAAA TERM 647 661748 - 661715 - f 90 -11 -3.81062 | opp_overlap 661715 AGTAAAAATTGGAAA GGGACCTTCTTTGG CAGAAT CCTGAGAAGGTCCC TTTTTTGATTTTAAA Csac_0593 661862 - 662881 + | cell shape determining protein MreB Csac_0594 662901 - 663674 + | flagellar basal body rod protein Csac_0595 663732 - 664535 + | hypothetical protein Csac_0596 664560 - 664910 + | hypothetical protein TERM 648 664915 - 664939 + T 85 -2.9 -6.07969 | gap 1, opp_overlap 664915 664916 664917, overlap 664917 AAGAAGAATAGAAAA TG-GCTGGCA TAATTT TGCCAGCTTA TTTTTTTTGGTTTTG TERM 649 664936 - 664917 - T 72 -9.3 -2.66976 | opp_overlap 664917 664915, overlap 664916 664915 GAAGAATAGAAAATG GCTGGCA TAATTT TGCCAGC TTATTTTTTTTGGTT TERM 650 664917 - 664936 + T 95 -9.3 -5.01676 | opp_overlap 664916 664915 664917, overlap 664915 GAAGAATAGAAAATG GCTGGCA TAATTT TGCCAGC TTATTTTTTTTGGTT Csac_0597 666046 - 664937 - | hypothetical protein TERM 651 666058 - 666072 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT Csac_0598 666382 - 667197 + | xylose isomerase domain-containing protein Csac_0599 667200 - 668300 + | oxidoreductase domain-containing protein TERM 652 668344 - 668313 - T 87 -5.2 -5.66989 | gap 1, opp_overlap 668313 TAAATAGGAAAAAAA GGGGCTTGTA-CAGA ATT TGTGCTAAAAGCCCC TTGATTGTTCTTATC Csac_0600 669150 - 668383 - | xylose isomerase domain-containing protein TERM 653 668696 - 668650 - G 78 -9.1 -3.72695 | gap 2, opp_overlap 668686, overlap 668685 668686 ACTTGCTCCAGCAAA CTGAACCCAGTAAGTATCAATTT CAA ACATTAATACTT-CTGGG-TCAG AATTTTCAATTAAAA TERM 654 669276 - 669321 + H 70 -4.3 -4.77165 | CGGAGATGACCTTAT TATCAAGATGTTGTAGTTT AGAAGGAA AAATTACAAAACCTTGATA TTTTGTTATAAACAA Csac_0601 669639 - 670592 + | auxin efflux carrier TERM 655 673267 - 673252 - g 76 -4.8 -4.90778 | TTGAGTTAAAGAAAA TTTACA ATGC TGTAAA GTCAATAGAACACTT TERM 656 673962 - 673946 - g 83 -5.9 -5.19879 | overlap 673948 673954 TTTTAAAGACAAAAA TAGTAAG ACA CTTACCA ATAAATGGCTAATCA Csac_0603 672258 - 674609 + | ATPase Csac_0604 674625 - 675980 + | hypothetical protein TERM 657 676732 - 676719 - g 73 -5.3 -4.59853 | overlap 676709 GGAAGTTGTTAAAAA CAAAG CTGA CTTTG GCATTGCATATGATG Csac_0605 676024 - 677373 + | phosphoglucosamine mutase TERM 658 677401 - 677417 + F 76 -5.2 -5.00616 | opp_overlap 677389 677401 TAAGTTAAAAAAAGG CCTTTT TTAAC AAAAGG TTTTTTCAAAGCGCC TERM 659 677523 - 677533 + F 85 -8.2 -4.4874 | overlap 677514 677515 GGTTTTCGGCGGGTG CCCC AGC GGGG TTTTGCCTTTTTCCC TERM 660 677963 - 677946 - g 70 -8.5 -3.40403 | GCCGTCTGATGAGAA CTCACAT CCGC ATGTGAG CCAGAACGGCAAGGT TERM 661 679502 - 679488 - g 78 -10 -3.31144 | CTGCGATGTTGACAA GCCAAG GAA CTTGGC AAAGAGTGTGACTGT Csac_0606 677689 - 679524 + | D-fructose-6-phosphate amidotransferase Csac_0607 679917 - 679588 - | HxlR family transcriptional regulator TERM 662 680179 - 680199 + G 70 -8.3 -3.33744 | opp_overlap 680179, overlap 680179 680181 TGAATGAGCTGAATA TTCATCCCT GCC AGGGATGTA ATTTTTGCCAAGAAA TERM 663 680179 - 680200 + G 78 -6.7 -4.56597 | gap 1, opp_overlap 680179, overlap 680179 680181 TGAATGAGCTGAATA TT-CATCCCT GCC AGGGATGTAA TTTTTGCCAAGAAAA TERM 664 680181 - 680197 + G 80 -10.9 -3.23708 | opp_overlap 680179, overlap 680179 680179 AATGAGCTGAATATT CATCCCT GCC AGGGATG TAATTTTTGCCAAGA Csac_0608 680049 - 680603 + | NADPH-dependent FMN reductase TERM 665 680890 - 680877 - g 70 -2.5 -5.09204 | ATATTGTAACAAAAA TAAAA GAAC TTTTA AAGACTTTTGAGGAC Csac_0609 680852 - 681139 + | hypothetical protein TERM 666 681219 - 681209 - f 80 -5.4 -5.28166 | TAAAATGAATAAAAA CGAA ATT TTCG AAACTACTAAAAACA Csac_0610 681583 - 681912 + | hypothetical protein Csac_0612 682507 - 683151 + | lysine exporter protein LysE/YggA Csac_0613 683718 - 683260 - | hypothetical protein Csac_0614 684038 - 683721 - | hypothetical protein Csac_0615 684555 - 684019 - | hypothetical protein Csac_0616 685183 - 684935 - | hypothetical protein Csac_0617 686449 - 685214 - | DNA-directed DNA polymerase Csac_0618 687749 - 686580 - | hypothetical protein TERM 667 687761 - 687775 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT Csac_0619 688031 - 688555 + | NADH dehydrogenase (ubiquinone), 24 kDa subunit TERM 668 689358 - 689334 - g 73 -8.8 -3.46285 | TATTCTAAATACCAA TTTTAGCTTT GATAT AAAGCTAAAA AAAGGTGCAGGGGCA Csac_0620 688570 - 690324 + | NADH dehydrogenase (quinone) TERM 669 693796 - 693816 + G 70 -8.4 -3.35046 | TATCGAAGGATGCAC CTGCTTTT GTAGA AAAAGCAG TATTTGACACAGTGA Csac_0621 690342 - 693878 + | molybdopterin oxidoreductase TERM 670 693911 - 693876 - f 87 -12.1 -2.63357 | opp_overlap 693876, overlap 693882 AAGCATTTGAAATAC TAAAAATAGGCTCTC TTTTAT GAGAGCCTATTTTGA TTTTTAATATTTTTG TERM 671 693876 - 693911 + F 100 -12.1 -5.02231 | opp_overlap 693876 693882 AAGCATTTGAAATAC TAAAAATAGGCTCTC TTTTAT GAGAGCCTATTTTGA TTTTTAATATTTTTG TERM 672 693905 - 693882 - f 100 -11.1 -4.93696 | opp_overlap 693876, overlap 693876 TTGAAATACTAAAAA TAGGCTCTC TTTTAT GAGAGCCTA TTTTGATTTTTAATA Csac_0622 693998 - 695209 + | iron-containing alcohol dehydrogenase TERM 673 695266 - 695300 + F 77 -8.7 -3.72027 | gap 1, opp_overlap 695265 695267, overlap 695267 TCTATAGTGAGCAAT AGTTGGGGTGGGTATT TTTT AGTACC-ACCCCAACA TTATTAATAAACACT TERM 674 695267 - 695299 + F 90 -12.2 -2.82895 | gap 1, opp_overlap 695265 695267, overlap 695266 CTATAGTGAGCAATA GTTGGGGTGGGTATT TTTT AGTACC-ACCCCAAC ATTATTAATAAACAC TERM 675 695299 - 695267 - f 81 -10 -3.16492 | gap 1, opp_overlap 695267 695266, overlap 695265 CTATAGTGAGCAATA GTTGGGGTGGGTATT TTTT AGTA-CCACCCCAAC ATTATTAATAAACAC TERM 676 695365 - 695378 + F 75 -2.4 -5.67063 | AGAGCATCCTTTCAG GCTT ACCCCC AAGC TTTTTTTGTCCTCAC Csac_0623 695646 - 695849 + | hypothetical protein Csac_0625 696274 - 696555 + | hypothetical protein Csac_0626 696710 - 697084 + | helix-turn-helix domain-containing protein Csac_0627 697081 - 697539 + | hypothetical protein Csac_0628 697812 - 698057 + | hypothetical protein TERM 677 698219 - 698244 + F 90 -4.7 -5.77632 | gap 1, opp_overlap 698219 TGCTATATTTTCAAA GGGCAG-GCTGT GTA AAAGCTCTGCTC TTTTTTTGTCATTTT Csac_0629 698538 - 698834 + | hypothetical protein TERM 678 698968 - 698949 - g 76 -4.4 -5.12068 | gap 1 TATATCTAATAAAAA GTTCA-TCT TCG AGATTGAAC AGATAACCAAGAGTA Csac_0630 698818 - 699312 + | nucleic acid binding protein Csac_0631 699395 - 699598 + | hypothetical protein Csac_0632 699612 - 700550 + | hypothetical protein Csac_0633 700683 - 702428 + | ATP-dependent OLD family endonuclease TERM 679 702528 - 702548 + F 71 -7.7 -3.55622 | GTCAACCTTTTATAC TGATGTTTT AAG GAAACATCA TTTGCAGGAATTAGA Csac_0634 702936 - 703808 + | DNA adenine methylase Csac_0635 703823 - 704248 + | hypothetical protein TERM 680 704277 - 704309 + T 72 -5.7 -4.4267 | gap 1, opp_overlap 704270 704277 TTAGAAAACTCAGAA GGGCTAAGCGCA AATCTGCCAC TGC-CTTAGCCC TTTTCCATTTTAACC Csac_0636 705625 - 704303 - | hypothetical protein TERM 681 704663 - 704643 - G 72 -8.3 -3.55061 | overlap 704641 GCATATATAACAACA TTTTGAGGC ATT GCCTCTAAA GATCCTTCTAAAATG TERM 682 705226 - 705213 - G 74 -3.9 -5.1675 | opp_overlap 705213 TCACTCACTAAAAAA TTTTC AGCC GAAAA GTTTGGGAAGTTATC Csac_0637 706043 - 706387 + | regulatory protein, ArsR Csac_0638 706440 - 706841 + | protein tyrosine phosphatase Csac_0639 707130 - 707840 + | hypothetical protein TERM 683 707888 - 707864 - f 70 -7.1 -3.61674 | opp_overlap 707865, overlap 707863 707865 TTTATATAGAAAAAG GCCACAGGCTT GAA AAGTCTGTGGT TTTTATTTTTTTAAC TERM 684 707887 - 707865 - f 80 -10.6 -2.76281 | opp_overlap 707865, overlap 707864 707863 TTATATAGAAAAAGG CCACAGGCTT GAA AAGTCTGTGG TTTTTATTTTTTTAA TERM 685 707865 - 707887 + F 100 -12.8 -5.86609 | opp_overlap 707864 707863 707865 TTATATAGAAAAAGG CCACAGGCTT GAA AAGTCTGTGG TTTTTATTTTTTTAA Csac_0640 708053 - 708358 + | hypothetical protein Csac_0641 708507 - 708872 + | hypothetical protein TERM 686 708902 - 708927 + F 100 -8.3 -5.55769 | TAACAATTAAACTAT TCCTTGGTGGT TATT GCCATCGAGGA TTTTTTGTTATAAAA Csac_0642 709002 - 710633 + | peptidase M48, Ste24p TERM 687 711011 - 711043 + T 100 -11.3 -4.71307 | opp_overlap 711013 711029 711030, overlap 711012 711013 GCTAATAAAAATGTA AAGGCCTTTGCTAAC AAA GTTGGCAAAGGCCAA TTTGTTTAATTTTTA TERM 688 711012 - 711042 + T 100 -14.8 -3.40344 | opp_overlap 711013 711029 711030, overlap 711011 711013 CTAATAAAAATGTAA AGGCCTTTGCTAAC AAA GTTGGCAAAGGCCA ATTTGTTTAATTTTT TERM 689 711041 - 711013 - T 100 -16.1 -4.05495 | opp_overlap 711012 711011 711013, overlap 711029 711030 TAATAAAAATGTAAA GGCCTTTGCTAAC AAA GTTGGCAAAGGCC AATTTGTTTAATTTT TERM 690 711013 - 711041 + T 100 -18.3 -2.61766 | opp_overlap 711013 711029 711030, overlap 711012 711011 TAATAAAAATGTAAA GGCCTTTGCTAAC AAA GTTGGCAAAGGCC AATTTGTTTAATTTT Csac_0643 711994 - 711077 - | hypothetical protein TERM 691 711379 - 711391 + g 82 -7.7 -4.50583 | AAAACTCCATTACTG CCTCA AAC TGAGG TTTTATAATCATCTT Csac_0644 713214 - 711991 - | hypothetical protein TERM 692 712171 - 712185 + g 73 -5.7 -4.55295 | opp_overlap 712167 712171 AAACAAAAAATTACA GATGG GTATG CCATC TTTATTTATAAGGAA TERM 693 712911 - 712932 + g 73 -6.7 -4.19506 | GAGTATCAGTTAGTG CTTCAATTT TATC AAATTGAGG TTTTAAAATTAGCCT TERM 694 713428 - 713416 - g 76 -6.3 -4.57073 | opp_overlap 713416 TACTTTTCCCAAAAA CCTTA TCA TAAGG TTGATATATCAGATG TERM 695 713528 - 713541 + G 73 -5.3 -4.67168 | TTTACGCAATAGGGG TCTCT TACC AGAGA TTTTTGAAACTTTTT TERM 696 713654 - 713670 + G 78 -3.7 -5.40072 | overlap 713655 TCAAGAGTGAGTACC TGCTTTT GGA AAGAGCG TTTTTTTCACAAGAC Csac_0645 713332 - 713967 + | TetR family transcriptional regulator Csac_0646 714050 - 714748 + | ABC transporter related TERM 697 715088 - 715078 - f 79 -6.8 -4.61231 | overlap 715086 CCATATGTCGAAAAA GGCA GAA TGCC ATCAAAAGGCGAAAT TERM 698 716406 - 716383 - f 91 -5.3 -5.79588 | opp_overlap 716395 TTAAAAGTAAAAAAA GTTGCCAAC CTTCCT GTTGGGAAC AATGGGTATATGGAA TERM 699 717673 - 717686 + F 77 -8.1 -3.85817 | opp_overlap 717673 717665 TAAAAAGCTTGATAA CGCTC ATAT GAGCG TTTATGCAAAAGACT TERM 700 717686 - 717673 - f 73 -8.1 -3.37589 | opp_overlap 717673, overlap 717665 TAAAAAGCTTGATAA CGCTC ATAT GAGCG TTTATGCAAAAGACT TERM 701 718657 - 718671 + F 87 -10 -3.85817 | opp_overlap 718657 TAAAAGGCTTGATAA CGCTCA TTT TGAGCG TTTCTGCAAAAGGCT TERM 702 718671 - 718657 - f 82 -10 -3.33009 | opp_overlap 718657 TAAAAGGCTTGATAA CGCTCA TTT TGAGCG TTTCTGCAAAAGGCT TERM 703 719041 - 718985 - f 100 -14 -4.68103 | opp_overlap 718992, overlap 718991 718992 GGAATTCCAATAAAA TTATAATTTTTCTAAAGACAAGCCCC ACTAA GGGGCTTGTCTTTAGAAAATTTTGGA GGTGTTATTATGGAA TERM 704 719035 - 718991 - f 100 -21.8 -3.75686 | opp_overlap 718992, overlap 718985 718992 CCAATAAAATTATAA TTTTTCTAAAGACAAGCCCC ACTAA GGGGCTTGTCTTTAGAAAAT TTTGGAGGTGTTATT TERM 705 719034 - 718992 - f 100 -25.3 -2.84327 | opp_overlap 718992, overlap 718991 718985 CAATAAAATTATAAT TTTTCTAAAGACAAGCCCC ACTAA GGGGCTTGTCTTTAGAAAA TTTTGGAGGTGTTAT TERM 706 718992 - 719034 + F 100 -25.3 -4.14874 | opp_overlap 718992 718991 718985 CAATAAAATTATAAT TTTTCTAAAGACAAGCCCC ACTAA GGGGCTTGTCTTTAGAAAA TTTTGGAGGTGTTAT Csac_0650 719021 - 719371 + | hypothetical protein Csac_0651 719470 - 720417 + | transposase, IS4 family protein Csac_0652 720625 - 721572 + | transposase, IS4 family protein Csac_0653 721659 - 722597 + | arylsulfatase regulator (Fe-S oxidoreductase)-like protein Csac_0654 722578 - 723255 + | abortive infection protein TERM 707 725093 - 725113 + G 70 -8.5 -3.46709 | CAATGGCTCCGGCAC TTACAATAA TAT TTATTGTAA TATTTGGCATTTTAT TERM 708 725596 - 725583 - g 75 -5.3 -4.84274 | TAATGATATTAAAAA TTCTG GGAT CAGAA AGTCCGATGAAGGAC TERM 709 726256 - 726240 - g 93 -3.7 -5.96219 | TAGTCATAAAAAAAA CATAATC TTA GAATATG CAGATATAATTTATA Csac_0655 724630 - 726345 + | ABC transporter related TERM 710 726407 - 726393 - T 72 -2.8 -5.40014 | AAAGAACAAGAAAAA TGAGAA GTA TTCACA CCAATAGTTACCAAA Csac_0656 728035 - 726587 - | hypothetical protein TERM 711 728152 - 728138 - H 84 -10 -3.37589 | opp_overlap 728138, overlap 728129 TAAAAAGCTTGATAA CGCTCA TTT TGAGCG TTTCTGCAAAAGGCT TERM 712 728138 - 728152 + H 87 -10 -3.85817 | opp_overlap 728138 728129 TAAAAAGCTTGATAA CGCTCA TTT TGAGCG TTTCTGCAAAAGGCT TERM 713 728292 - 728282 - g 72 -4 -5.03314 | TTGATTCTTAAAAAA GAAA ATA TTTC ACTGAGCGAGTACTG Csac_0657 728201 - 728635 + | hypothetical protein TERM 714 729345 - 729326 - g 71 -4.4 -4.88228 | gap 1, overlap 729327 729328 ATGTAAGATCAAAAA GTTCTGTAT TTT ATACAGA-C GAAAATGGTTTTCCA Csac_0658 728716 - 730317 + | hypothetical protein Csac_0659 730339 - 731535 + | hypothetical protein TERM 715 732186 - 732172 - g 70 -8.6 -2.98786 | overlap 732164 CACATGACAATCACA TTGCCT CTC AGGCAA AAAGGATTGTAAGAA Csac_0660 731565 - 732242 + | ABC transporter related TERM 716 733020 - 733004 - g 84 -5.1 -5.29716 | overlap 733006 TTAACACAACAAAAA CGCAACT TGA AGTTGGG AAAAAGTACATGCTT TERM 717 734740 - 734726 - g 73 -8.6 -3.38782 | overlap 734724 CATCAAACCAGAACA CAAGCT TGG AGCTTG GCGCAAAATATGGGC Csac_0661 732283 - 735450 + | hypothetical protein Csac_0662 736269 - 736844 + | hypothetical protein Csac_0663 737832 - 739190 + | Mannan endo-1,4-beta-mannosidase Csac_0664 740663 - 739299 - | glycoside hydrolase family protein Csac_0665 741397 - 740822 - | nitroreductase TERM 718 740918 - 740928 + g 70 -6.8 -4.12198 | CCACAAAGGTTTGTA TCCC TCA GGGA TTTTCAGAAGTTCTA Csac_0666 743151 - 741436 - | hypothetical protein TERM 719 741549 - 741559 + g 78 -4 -5.31855 | opp_overlap 741549 CTTTTAAAGGATCAA TAAG TTT CTTA TTTTTGTTCTTAATG Csac_0667 743325 - 744116 + | PhzF family phenazine biosynthesis protein TERM 720 744126 - 744138 + T 75 -4.8 -5.02606 | opp_overlap 744104 CAATAAGCATCAGTT CAGG CAGTC CCTG TTTTCTTCTTTAATC Csac_0668 744620 - 744120 - | hypothetical protein Csac_0669 745139 - 744627 - | hypothetical protein TERM 721 745096 - 745126 + g 81 -7 -4.54047 | opp_overlap 745096 745105, overlap 745097 CCAATTAGAGTAAAG GGGTTAAAATTGAG GTC TTCAATTTTGACCA TTTTGTGTGCCATGA TERM 722 745097 - 745125 + g 80 -10.5 -3.31946 | opp_overlap 745096 745105, overlap 745096 CAATTAGAGTAAAGG GGTTAAAATTGAG GTC TTCAATTTTGACC ATTTTGTGTGCCATG TERM 723 747353 - 747397 + H 95 -8.9 -5.08824 | gap 1, opp_overlap 747358, overlap 747358 ATATATAAAGAATGT TGAAA-GGGGACTATTCA AAAGGCAAAG TGAATAGTCCCCTTTTCG TTTTTTCAATAAAAC TERM 724 747391 - 747358 - H 89 -11.2 -3.6512 | opp_overlap 747353 747358 TAAAGAATGTTGAAA GGGGACTATTCA AAAGGCAAAG TGAATAGTCCCC TTTTCGTTTTTTCAA TERM 725 747358 - 747391 + H 100 -11.2 -4.86862 | opp_overlap 747358, overlap 747353 TAAAGAATGTTGAAA GGGGACTATTCA AAAGGCAAAG TGAATAGTCCCC TTTTCGTTTTTTCAA TERM 726 749520 - 749531 + G 76 -4.4 -5.1101 | overlap 749504 CATTGTGCTGACATC GCAA GGGG TTGC TTTTTTGCATGGTGG Csac_0671 747499 - 749976 + | pullulanase, type I Csac_0672 751139 - 750009 - | hypothetical protein TERM 727 750423 - 750443 + g 78 -5.5 -4.95484 | opp_overlap 750422 750425, overlap 750426 AATTCCAAATTCAAT GATGTTTTT ATT AAAAACCTC TTTTCTTTCATACTC TERM 728 751327 - 751374 + H 100 -23.2 -5.76237 | opp_overlap 751337 AATGATGGCTGATGA CTCCTACAAATATTGCGTCTTT GTAA AAAGGCGTAATATTTGTAGGAG TTTTTTGTTTATATA Csac_0673 751449 - 751850 + | CrcB protein Csac_0674 751847 - 752203 + | CrcB protein Csac_0675 752524 - 752727 + | hypothetical protein Csac_0676 752938 - 754197 + | histidyl-tRNA synthetase aspS 754225 - 756012 + | aspartyl-tRNA synthetase Csac_0678 756453 - 758723 + | cellulase TERM 729 758760 - 758783 + F 100 -7.5 -5.66684 | opp_overlap 758760 CTTGTACCACATAAA GGGACTATC AAATAG GATAGTTCC TTTTTTTCTGCCTTC Csac_0679 758992 - 759936 + | binding-protein-dependent transport systems inner membrane component Csac_0680 759966 - 760871 + | binding-protein-dependent transport systems inner membrane component Csac_0681 760961 - 762463 + | ABC-type sugar transport system periplasmic component-like protein TERM 730 762524 - 762469 - f 100 -9.6 -6.11392 | opp_overlap 762475 762479, overlap 762471 762473 762475 AAAGAAATAAAAAAA TA-TAGACAAACGGGATACCAATA GTCAGTTTTA TATTGGTATCCCGTTTGT-TACTA ATATTAGTCAATTAA TERM 731 762521 - 762471 - f 100 -13.8 -4.6372 | gap 1, opp_overlap 762475 762479, overlap 762469 762473 762475 AGAAATAAAAAAATA TAGACAAACGGGATACCAATA GTCAGTTTTA TATTGGTATCCCGTTTGT-TA CTAATATTAGTCAAT TERM 732 762520 - 762473 - f 100 -14.5 -3.87454 | opp_overlap 762475 762479, overlap 762471 762469 762475 AAATAAAAAAATATA GACAAACGGGATACCAATA GTCAGTTTTA TATTGGTATCCCGTTTGTT ACTAATATTAGTCAA TERM 733 762518 - 762475 - f 100 -17.1 -3.46271 | opp_overlap 762475 762479, overlap 762473 762471 762469 ATAAAAAAATATAGA CAAACGGGATACCAATA GTCAGTTTTA TATTGGTATCCCGTTTG TTACTAATATTAGTC TERM 734 762475 - 762518 + F 100 -17.1 -3.28637 | opp_overlap 762475 762473 762471 762469, overlap 762479 ATAAAAAAATATAGA CAAACGGGATACCAATA GTCAGTTTTA TATTGGTATCCCGTTTG TTACTAATATTAGTC TERM 735 762479 - 762514 + F 100 -12.1 -4.28713 | opp_overlap 762475 762473 762471 762469, overlap 762475 AAAAATATAGACAAA CGGGATACCAATA GTCAGTTTTA TATTGGTATCCCG TTTGTTACTAATATT Csac_0682 762625 - 763956 + | extracellular solute-binding protein Csac_0683 763959 - 765791 + | histidine kinase internal region TERM 736 766795 - 766783 - g 71 -4.9 -4.69464 | AAAATATTTGAAAAA TGAAA TTA TTTCA AATGTAAGATATGGC Csac_0684 765809 - 767449 + | response regulator receiver protein Csac_0685 768735 - 767515 - | major facilitator transporter TERM 737 767959 - 767947 - G 74 -4.9 -4.87626 | CGCTAACATCAAAAA TATCT CTA AGATA CTCAAACCTCTGTTT TERM 738 768345 - 768359 + g 73 -8.6 -3.42574 | opp_overlap 768342, overlap 768334 TGTTTGCAATTAGTG CATCTC TAG GAGATG TTCTAATACCCTTGC Csac_0686 769153 - 768728 - | DNA binding domain-containing protein TERM 739 768858 - 768871 + g 72 -3.9 -5.06816 | TCAAATTTTTTGTCT TCAAT GATA ATTGA TTTTTCTTGCGCAAT TERM 740 769288 - 769267 - R 79 -3.7 -5.54264 | overlap 769269 769272 AAAGATGCAAAAAAA TAGAGGAGA TGGT TCTCATCCA GCTAAAAGTTGTGAA Csac_0687 769989 - 769282 - | hypothetical protein TERM 741 770012 - 769962 - G 70 -5.6 -4.49756 | opp_overlap 769964, overlap 769964 769967 769970 TGTCAAACATTAAAA TATAAGAAGAAGACAATAAGCACT TCA ATTGCTCATCATCTCCTTCTTAGT TTTGTATATTGCTGC TERM 742 770010 - 769964 - G 95 -12.6 -3.85133 | opp_overlap 769964, overlap 769962 769967 769970 TCAAACATTAAAATA TAAGAAGAAGACAATAAGCACT TCA ATTGCTCATCATCTCCTTCTTA GTTTTGTATATTGCT TERM 743 770007 - 769967 - G 86 -9.9 -4.01992 | opp_overlap 769964, overlap 769964 769962 769970 AACATTAAAATATAA GAAGAAGACAATAAGCACT TCA ATTGCTCATCATCTCCTTC TTAGTTTTGTATATT Csac_0688 770167 - 770343 + | hypothetical protein TERM 744 770463 - 770497 + F 82 -2.7 -5.92337 | overlap 770466 AGAAGGTATTGATAT GTAGAGGGTGGGCTA AATGA TAGGCGCCCCTCTTC TTTTTTTTAATGTAT TERM 745 773397 - 773376 - g 70 -3.1 -4.90381 | TTCAACAGAACAAAA TATATGAAC AGCA ACTCATATA ATGCGGGTGACAAAA Csac_0689 770817 - 774227 + | pullulanase, type I TERM 746 774278 - 774246 - T 100 -15 -3.55444 | opp_overlap 774235 774234 774243 774242 774240, overlap 774231 TGTTTAGTCTCTAAA GAGGCTGGTACTTT ATTTA AAAGTGCCAGCCTC ACACATTTTGTGTAA Csac_0690 774932 - 774258 - | HhH-GPD family protein TERM 747 774851 - 774861 + g 70 -6.8 -4.07568 | opp_overlap 774830 CAAACTTTGTTTCAG CTGG CCA CCAG TTTTGAGGGCCCCAA Csac_0691 775605 - 774943 - | hypothetical protein TERM 748 775048 - 775058 + g 78 -6.8 -4.5464 | opp_overlap 775036 775046 775042 775048 AGAGAGCAAGGAATA CTCC TCA GGAG TTTTGCTTCTATCTA TERM 749 775678 - 775668 - H 74 -5.4 -4.83169 | ATTTTTTCAGAAAAA TCAG CAG CTGA AAGTAAAGAAGGACC TERM 750 775891 - 775867 - H 77 -8.1 -3.90464 | opp_overlap 775859, overlap 775859 GGCGAAATAATATAA TTAGTTTATTT AGT AAACAAACTAA AAAGGAGTGATTGGT TERM 751 776487 - 776477 - g 75 -5.4 -4.74084 | AAATTAAAATCAAAA GGAA TAA TTCC TATAACACTTGCAAA Csac_0692 775907 - 777217 + | extracellular solute-binding protein TERM 752 777256 - 777240 - f 84 -3.7 -5.73672 | overlap 777243 AAATAATTAAAAAAA TTAGCTT ACC AAGCTGA AATAATGTGGATTGG TERM 753 777310 - 777262 - f 100 -14.7 -3.97019 | opp_overlap 777263, overlap 777263 ACCAAGCTGAAATAA TGTGGATTGGTATTAGCTAGAGC TTT GCTTTGGCTGATACCAATCCACT TTTTGTAATAAGAAA TERM 754 777263 - 777309 + F 100 -24.8 -4.91109 | opp_overlap 777263 777262 CCAAGCTGAAATAAT GTGGATTGGTATTAGCTAGAGC TTT GCTTTGGCTGATACCAATCCAC TTTTTGTAATAAGAA TERM 755 777309 - 777263 - f 100 -18.2 -2.97489 | opp_overlap 777263, overlap 777262 CCAAGCTGAAATAAT GTGGATTGGTATTAGCTAGAGC TTT GCTTTGGCTGATACCAATCCAC TTTTTGTAATAAGAA Csac_0693 777374 - 778264 + | binding-protein-dependent transport systems inner membrane component Csac_0694 778302 - 779129 + | binding-protein-dependent transport systems inner membrane component Csac_0695 779215 - 780414 + | ROK family protein TERM 756 780669 - 780654 - g 76 -7.6 -4.1043 | opp_overlap 780653 TTTAAAGATTACAAA TTCTGC TCGT GCAGAA GGTCTTTATTCAGTA TERM 757 781191 - 781173 - g 88 -10.4 -3.89411 | TCAAAAGAGCAAGAA TGGAAAGA TTC TCTTTCCA ATAAAAGGATTGCTC TERM 758 781654 - 781670 + G 71 -5.1 -4.55128 | opp_overlap 781650 781649, overlap 781650 AAACCAGAAAGCCTT CAACCTT ATG AAGGTAG TTTTGATTTCAACAT Csac_0696 780445 - 782505 + | endo-1,4-beta-xylanase TERM 759 782631 - 782660 + G 100 -12.9 -5.8901 | opp_overlap 782631 CCTTGTGGCTGATAA CTCCTGTCCGTAT AAAG GTGCGGGCAGGAG TTTTTTGTTTTATAT TERM 760 782752 - 782742 - g 73 -5.4 -4.6468 | TGAAATGATAGAAAA CTTC AAA GAAG ATAAGTGTATAATTT TERM 761 783300 - 783286 - g 70 -8.6 -3.0281 | overlap 783299 CACATCAATTACACA CCTGAT GAA ATCAGG GCATGGCACATGGCT Csac_0697 782578 - 783342 + | hypothetical protein Csac_0698 783666 - 786074 + | hypothetical protein Csac_0699 786077 - 787009 + | ABC transporter related Csac_0700 787041 - 787940 + | ABC-2 type transporter TERM 762 788009 - 787995 - g 70 -2.8 -5.10077 | opp_overlap 787995 787996, overlap 787996 AAAGAGTTCAAAAAA GGCAAA TGT TTTGCA TATTTTTATCTAAGC TERM 763 788615 - 788583 - g 70 -2.8 -5.20633 | AAAAAGAGATAAAAA TTGCAAAGTCCA AAGATGAAA TGGAACTTGCAA AGCAGAAGGCGTGGT Csac_0701 787943 - 789364 + | hypothetical protein Csac_0702 789372 - 790349 + | ATPase Csac_0703 790343 - 791242 + | hypothetical protein TERM 764 792011 - 791995 - g 78 -3.7 -5.36441 | opp_overlap 791995 TTTGCAGACAAAAAA CTTGTTG GTG CAAAAAG TGTTGTGCTTTTGCC TERM 765 792919 - 792929 + G 73 -5.4 -4.57569 | opp_overlap 792919 GAAAAAAAGACAGAT GCTA CTT TAGC TTTTTCGGAAACTGG Csac_0704 791245 - 793056 + | hypothetical protein TERM 766 795171 - 795159 - g 78 -7.7 -4.19506 | ATGGGAAGTTTAAAA GCAGT GCT ACTGC AACTCTAAAGTGCAT Csac_0705 793040 - 795769 + | von Willebrand factor, type A TERM 767 796285 - 796273 - g 74 -7.7 -3.88946 | overlap 796276 TATTGCACAGAAGAA GAGCT TGA AGCTC AAAGACAGGAGCTTT Csac_0706 795940 - 797397 + | glutamyl-tRNA synthetase TERM 768 797515 - 797496 - gf 70 -6.4 -4.00465 | overlap 797494 797497 TATAATGGAAAAAGA CCCTGCTT GCAA AAGCAGGC TTGAGACACTTCTTT TERM 769 797514 - 797497 - gf 81 -9.9 -2.99195 | overlap 797496 797494 ATAATGGAAAAAGAC CCTGCTT GCAA AAGCAGG CTTGAGACACTTCTT Csac_0707 797440 - 798144 + | serine O-acetyltransferase TERM 770 798356 - 798334 - gT 71 -7 -3.98915 | opp_overlap 798352 GATAAACAGAGCAAA CAAAGAGGGC ATA ACCGTCTTTG AGCTTGCTGAAAGGT Csac_0708 798101 - 799498 + | cysteinyl-tRNA synthetase TERM 771 799524 - 799496 - T 89 -8.9 -4.50976 | opp_overlap 799501, overlap 799501 GTTGAGAGGATAAAA TAAAACCGGGC AATTTGA GCCCGGTTTTT TAGCATTTCCACGGT TERM 772 799519 - 799501 - T 95 -8.8 -5.20781 | opp_overlap 799501, overlap 799496 GAGGATAAAATAAAA CCGGGC AATTTGA GCCCGG TTTTTTAGCATTTCC TERM 773 799501 - 799519 + T 95 -8.8 -5.12707 | opp_overlap 799501 799496 GAGGATAAAATAAAA CCGGGC AATTTGA GCCCGG TTTTTTAGCATTTCC Csac_0709 799880 - 799524 - | hypothetical protein TERM 774 799753 - 799765 + g 71 -9.1 -3.23274 | overlap 799757 TCTTTTGGTACTATC GCTGG GTA CCAGC TTACCTTGTAAAGCC Csac_0710 800328 - 799936 - | HxlR family transcriptional regulator Csac_0711 800474 - 801661 + | iron-containing alcohol dehydrogenase TERM 775 801750 - 801705 - T 95 -8.5 -5.16572 | opp_overlap 801707 801712, overlap 801707 801712 ATCGAATCCAAAAAA TACAAAAGGAGCTATTCGG CAACAAAT CTGAATAGCTCCTTTTATT CTAAAGTCTATTAAT TERM 776 801707 - 801748 + T 85 -11.1 -3.36648 | opp_overlap 801705 801707 801712, overlap 801712 CGAATCCAAAAAATA CAAAAGGAGCTATTCGG CAACAAAT CTGAATAGCTCCTTTTA TTCTAAAGTCTATTA TERM 777 801748 - 801707 - T 100 -11.1 -4.20888 | opp_overlap 801707 801712, overlap 801705 801712 CGAATCCAAAAAATA CAAAAGGAGCTATTCGG CAACAAAT CTGAATAGCTCCTTTTA TTCTAAAGTCTATTA TERM 778 801712 - 801743 + T 100 -11 -4.78237 | opp_overlap 801707 801705 801712, overlap 801707 CCAAAAAATACAAAA GGAGCTATTCGG CAACAAAT CTGAATAGCTCC TTTTATTCTAAAGTC TERM 779 801743 - 801712 - T 95 -8.8 -5.06052 | opp_overlap 801712 801707, overlap 801707 801705 CCAAAAAATACAAAA GGAGCTATTCGG CAACAAAT CTGAATAGCTCC TTTTATTCTAAAGTC Csac_0712 802307 - 801831 - | hypothetical protein TERM 780 801938 - 801962 + g 71 -4.3 -4.75174 | overlap 801939 TCATATTTTTCACTA TGTTCATAAGA GTT TCTTTTGAACC TTTTTCGATTCCCTG TERM 781 802303 - 802328 + g 79 -4.8 -5.1356 | gap 1 AAATACAGTATACTG CTCAAAAGGTC TAACC GGCCTTT-GAG TTTTTCTTCATCAAG TERM 782 802588 - 802574 - RH 77 -4.2 -5.38398 | AGAAAAATAGAAAAA CTACCA GGA TGGGAG GACAGCCTACTATGA Csac_0714 804086 - 803640 - | hypothetical protein Csac_0713 802600 - 803718 + | hypothetical protein TERM 783 804247 - 804284 + Tr 100 -10 -5.87996 | gap 1, opp_overlap 804248, overlap 804248 CAAAAAACAATAAAA AGACATAGCCAGCTTGC GCAAA GCA-GTTGGCTATGTCC TTTTTTTATTACTTA TERM 784 804248 - 804283 + Tr 100 -13.5 -4.10357 | gap 1, opp_overlap 804248, overlap 804247 AAAAAACAATAAAAA GACATAGCCAGCTTGC GCAAA GCA-GTTGGCTATGTC CTTTTTTTATTACTT TERM 785 804283 - 804248 - TR 100 -11.3 -5.54403 | gap 1, opp_overlap 804247 804248 AAAAAACAATAAAAA GACATAGCCAGCTTGC GCAAA GCA-GTTGGCTATGTC CTTTTTTTATTACTT Csac_0715 806186 - 804297 - | amino acid transporter-like protein TERM 786 805292 - 805276 - G 74 -9.5 -3.01133 | overlap 805275 ACAAGGATTATAAAG GTTGTTG CAG CAACAAC ATAATACATAAAGCT TERM 787 806356 - 806332 - H 80 -6.5 -4.75372 | opp_overlap 806332 ATTATGCACTAAAAA TTGAGCTAACT GAA AAATAGCTCAA GTGGTTTATTTTTCT Csac_0716 806897 - 808225 + | Cl- channel, voltage-gated family protein TERM 788 809486 - 809462 - g 70 -3.5 -4.91285 | overlap 809465 809476 ATGAATAGAATAAAA CCACACCGCAA GTA CTACGATGTTG TAGAAAGAGCTCTTT Csac_0717 808397 - 810358 + | hypothetical protein TERM 789 811295 - 811320 + G 74 -7.7 -3.86346 | opp_overlap 811302, overlap 811303 AATGATGATACTTTT GATAAATTGTG TTCC CACACTTTATC TTTATGAGAAGATGG TERM 790 811413 - 811426 + G 70 -8.1 -3.35465 | CAATTAGGATTCTTA GGTGC AGTT GCACC TTCATATATATCAAT Csac_0718 810441 - 811535 + | ethanolamine utilization protein-like protein TERM 791 811564 - 811539 - T 82 -7.7 -4.58236 | gap 1, opp_overlap 811539 811537, overlap 811541 TATAAAATATGAAAA TCCCTA-ACTCC GTC GGAGTATAGGAA TGCTTTTTCTTCTAT Csac_0719 812441 - 811542 - | polysaccharide deacetylase TERM 792 812103 - 812115 + g 80 -6.3 -4.99035 | opp_overlap 812093 TAAATTTGGGTATGC CAATG TGA CATTG TTTTTGTATCCGTCA TERM 793 812612 - 812587 - R 100 -11.9 -5.38839 | opp_overlap 812587 812589 TACAGAAAAATAAAA GAGGCTGCCAC ATTT ATGACAGCCTC TTGCACAAATCTCAT Csac_0720 813704 - 812652 - | hypothetical protein Csac_0721 813994 - 815664 + | ribulokinase TERM 794 815812 - 815799 - g 78 -5.3 -4.98911 | TATGATAAAAATAAA CTTGT ATGG ACAAG ATGATGATAAAATGA Csac_0722 815785 - 816879 + | regulatory protein GntR, HTH Csac_0723 816882 - 817526 + | L-ribulose-5-phosphate 4-epimerase TERM 795 817578 - 817607 + T 100 -10 -4.88163 | opp_overlap 817576 817579 817582, overlap 817579 TTTATTATACAAAGC ACAAGGCTGCCG TTAATT TGGCAGCCTTGC TTTATTTTATATTCC TERM 796 817606 - 817579 - T 100 -12.8 -3.07876 | opp_overlap 817578 817579, overlap 817576 817582 TTATTATACAAAGCA CAAGGCTGCC GTTAATTT GGCAGCCTTG CTTTATTTTATATTC TERM 797 817579 - 817606 + T 100 -13.5 -3.51271 | opp_overlap 817579 817576 817582, overlap 817578 TTATTATACAAAGCA CAAGGCTGCCG TTAATT TGGCAGCCTTG CTTTATTTTATATTC TERM 798 817603 - 817582 - T 77 -8.7 -3.67102 | opp_overlap 817579 817578, overlap 817579 817576 TTATACAAAGCACAA GGCTGCC GTTAATTT GGCAGCC TTGCTTTATTTTATA Csac_0724 818972 - 817614 - | pyruvate carboxyltransferase TERM 799 817718 - 817730 + g 76 -3.3 -5.252 | ATTCTTTGACCTTCT GAACC CTT GGGTC TTTTTTGTCAACCTG Csac_0725 819813 - 820841 + | hypothetical protein TERM 800 821243 - 821224 - g 73 -9.4 -2.81936 | overlap 821221 ATATCACAAAATTTA TTATGGCA ATAA TGCCATAA AGCGTATAGAGTTTT Csac_0726 820859 - 821416 + | hypothetical protein TERM 801 821582 - 821551 - T 80 -9.5 -3.5525 | opp_overlap 821551 821550 ATATATTTTGTTAAA GGGGCTATCCA TTCATTTTTT TGGACAGCCCC CTATTTTAATGTTAG Csac_0727 822719 - 821598 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 802 822295 - 822311 + g 71 -4.4 -4.75356 | opp_overlap 822283 822280, overlap 822293 822292 TCAGCATCTGCAATG GCAGAG CCAAT CTTTGC TTTTTGAGTATGTTT Csac_0728 822937 - 823503 + | glutamine amidotransferase of anthranilate synthase TERM 803 824782 - 824764 - g 77 -10.4 -2.78495 | TGATGAGGAAGAGGA GTACAAAG AGA CTTTGTAC AAGGGAAAACCATTT Csac_0729 823511 - 824839 + | anthranilate synthase TERM 804 824939 - 824927 - g 71 -9.1 -3.28405 | opp_overlap 824926 824925 824927 ACAATATATTATCAA GAGGG CAT CCCTC ACTTTTTATATGATC Csac_0730 824858 - 825619 + | aminotransferase, class IV Csac_0731 826766 - 825690 - | FMN-binding domain-containing protein TERM 805 825861 - 825883 + g 80 -6.4 -4.86293 | CAGCTGGGCAAAGCT TTGTGTTTCA TTA TGAGATACAA TTTTAATTTTTGTTA Csac_0732 827320 - 826820 - | hypothetical protein TERM 806 827176 - 827161 - G 81 -2.6 -5.68023 | TTACAATTAAAAAAA TGAAAT TTGA ATTCCA GTTAAAAGTTTCTTT Csac_0733 828159 - 827317 - | ApbE family lipoprotein Csac_0734 829035 - 828430 - | TetR family transcriptional regulator TERM 807 828547 - 828595 + g 70 -2.9 -5.15634 | gap 2 AACAAGCTCAAGAAT CATAAAAACA-ACTATTT-CAAG CTCAT CTTCTGAATAGTTTGTTTTTATG TTTTTTAATAGCATC TERM 808 828827 - 828837 + g 73 -5.4 -4.59109 | overlap 828823 ATTTCAGCACTTTTT CTCA AAA TGAG TTTTTCAAGAATATC Csac_0735 830715 - 829948 - | hypothetical protein TERM 809 830696 - 830676 - G 71 -4.9 -4.56133 | opp_overlap 830676 CTGCAATAATTAAAA TTAAAATAA TGC TTATCTTAA TCACTTTCTCTTTTC Csac_0736 830986 - 831372 + | CopY family transcriptional regulator Csac_0737 831975 - 832148 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Csac_0738 832181 - 832795 + | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit Csac_0739 832755 - 834140 + | Orn/Lys/Arg decarboxylase, major region Csac_0740 834130 - 834750 + | dTMP kinase Csac_0741 834790 - 835119 + | hypothetical protein TERM 810 835448 - 835429 - g 91 -9.4 -4.4572 | AATATTTCAAAGAAA GCCTTTTT GGCA AAAAAGGC AGGCACAAAATATTT Csac_0742 835149 - 835595 + | hypothetical protein TERM 811 836403 - 836391 - g 76 -3.4 -5.27709 | TTATAAAAAAACAAA GAGT ATTGA ACTC ATTACAAACACAGAC Csac_0743 835612 - 836574 + | DNA-directed DNA polymerase TERM 812 837090 - 837071 - g 70 -8.6 -3.06696 | opp_overlap 837071 TCCGTGCGGAAGAGA GGTGTGCT GTGC AACACACC TTTGCGAATTTCAGC Csac_0744 836580 - 837467 + | PSP1 domain-containing protein TERM 813 837686 - 837664 - g 76 -3.4 -5.31877 | ATTTAGTATAAAAAA CTCCTCTTTT CAA ACAAGAGCAG AAGAAAAGTTTGAGA Csac_0745 837590 - 838882 + | hypothetical protein TERM 814 839049 - 839032 - f 80 -5.7 -4.99645 | ATCTCATAAACAAAA TTGTATA CATA TATACAA TGTGGAGGGTAAGTT Csac_0746 839066 - 840463 + | pyruvate carboxyltransferase TERM 815 840544 - 840517 - T 100 -11.3 -4.74598 | opp_overlap 840517 GAAACTGAAAATAAA TGGCCAGGGGT ATCAAA ACCCGTGGCCA TTTTTGTTGGGGTAA TERM 816 840517 - 840544 + T 100 -11.3 -5.08601 | opp_overlap 840517 GAAACTGAAAATAAA TGGCCAGGGGT ATCAAA ACCCGTGGCCA TTTTTGTTGGGGTAA Csac_0747 841953 - 840664 - | hypothetical protein Csac_0748 842591 - 841950 - | ABC transporter related TERM 817 842918 - 842902 - g 73 -2.2 -5.28166 | opp_overlap 842912 842913, overlap 842904 842913 GAAAAGTAACAAAAA TAGCAG AGACA CTGCTG AAATTGCAGCAGATT Csac_0749 842801 - 843241 + | hypothetical protein TERM 818 844786 - 844768 - g 74 -9.6 -2.99325 | opp_overlap 844771, overlap 844767 TTCCCACAAGGAAAG CCACTACC AGA GGTAGTAG TTGGCAAAGTTTTGG Csac_0750 843391 - 845322 + | aconitate hydratase TERM 819 845352 - 845372 + F 74 -9 -3.00476 | opp_overlap 845352, overlap 845354 AGTAATTTTTAAGAA GAGGGGAT ACAAA GTCCCCTC TATATAATTAAAAAT TERM 820 845372 - 845352 - f 75 -8.3 -3.65581 | opp_overlap 845352 845354 AGTAATTTTTAAGAA GAGGGGA TACAAAG TCCCCTC TATATAATTAAAAAT Csac_0751 845409 - 846416 + | isocitrate dehydrogenase (NAD(+)) Csac_0752 846449 - 847144 + | GntR family transcriptional regulator TERM 821 847131 - 847160 + F 100 -12.3 -5.79526 | gap 1, opp_overlap 847141 847144, overlap 847133 TGGAAGAAAAGACTG TGGCAGGGAAGTAG GGA CT-CTTCCCTGCTA TTTTTTTTGAGGTAT TERM 822 847133 - 847158 + F 100 -12.7 -4.53853 | gap 1, opp_overlap 847141 847144, overlap 847131 GAAGAAAAGACTGTG GCAGGGAAGTAG GGA CT-CTTCCCTGC TATTTTTTTTGAGGT Csac_0753 847250 - 849478 + | Mur ligase middle domain-containing protein Csac_0754 849553 - 849840 + | hypothetical protein Csac_0755 850327 - 850743 + | hypothetical protein TERM 823 850761 - 850781 + F 95 -10.5 -4.49644 | opp_overlap 850759 850757 850761 AGGGAGAAAAGCAGA GGGAGATTT GAA AAGTCTCCC TTTTAAATTTTTGAT TERM 824 850781 - 850761 - f 70 -8.3 -3.14989 | opp_overlap 850761, overlap 850759 850757 AGGGAGAAAAGCAGA GGGAGATTT GAA AAGTCTCCC TTTTAAATTTTTGAT TERM 825 851077 - 851097 + G 72 -3.9 -5.055 | opp_overlap 851096, overlap 851055 851096 ATTAAAGAATACTTT GCTTTACAG TTT CGGAAAAGC TTTTTTAAGCCTTAC Csac_0756 850883 - 852628 + | diguanylate cyclase TERM 826 852919 - 852937 + G 72 -8.2 -3.53563 | CTGTTTAAAGAAGCT GTGAATGT TCA GCATTCAC TTTCAAAAGGACTAT Csac_0757 852625 - 854292 + | phosphoribulokinase/uridine kinase TERM 827 854298 - 854330 + T 100 -13.6 -5.30686 | opp_overlap 854301, overlap 854301 TGATTTTTAATAAAA AAATGGTCTGGGAT AAAGC ATCCCAGACCATTA TTTTTTATAACTCTT TERM 828 854327 - 854301 - T 100 -16 -5.7946 | opp_overlap 854298 854301 TTTTTAATAAAAAAA TGGTCTGGGATA AAG CATCCCAGACCA TTATTTTTTATAACT TERM 829 854301 - 854327 + T 100 -15.3 -4.73105 | opp_overlap 854301, overlap 854298 TTTTTAATAAAAAAA TGGTCTGGGAT AAAGC ATCCCAGACCA TTATTTTTTATAACT Csac_0758 855257 - 854370 - | hypothetical protein TERM 830 857035 - 857019 - g 76 -5.9 -4.55673 | AAATATAGCACAAAA CATCTTG CAG CAAAATG GATTTAGAAAGGTTT Csac_0759 855448 - 857109 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Csac_0760 857742 - 857137 - | uncharacterized membrane-associated protein TERM 831 857402 - 857376 - G 91 -5.8 -5.47218 | opp_overlap 857379 857380, overlap 857379 857381 TTCCAGCCAAAAAAA TTACAGGTGTGC GCG GCACACCAATTA TTCTTGCAATTGGCA TERM 832 857380 - 857398 + g 70 -8.8 -2.9756 | opp_overlap 857379 857376 857381, overlap 857379 AGCCAAAAAAATTAC AGGTGTGC GCG GCACACCA ATTATTCTTGCAATT TERM 833 857397 - 857381 - G 89 -12.3 -3.31247 | opp_overlap 857380 857379, overlap 857379 857376 GCCAAAAAAATTACA GGTGTGC GCG GCACACC AATTATTCTTGCAAT TERM 834 858001 - 858019 + H 74 -6.8 -4.18094 | opp_overlap 858001, overlap 858014 858016 ATAAATGGTGTGAAA GTTAAGAA AAT TTCTTGAC TTTTCAGGTCATTTG Csac_0761 858109 - 859137 + | 3D domain-containing protein TERM 835 859159 - 859184 + F 90 -8.3 -4.90079 | opp_overlap 859174 TGTGAAAAATGTGCT GGCCTCCTT GACAAAGA AAGGGGGCC TTTTGTTGTTCAAAT Csac_0762 859348 - 860241 + | glycosidase, PH1107-related TERM 836 860802 - 860826 + G 73 -9.3 -2.9302 | opp_overlap 860807, overlap 860816 AATAGATAAGGTTTT GATAATTGGCC TTG GGCCAATTGGC CTTATTATGCTTGAG TERM 837 860821 - 860807 - g 78 -10 -3.30338 | opp_overlap 860802 860816 ATAAGGTTTTGATAA TTGGCC TTG GGCCAA TTGGCCTTATTATGC TERM 838 860816 - 860827 + G 71 -7.2 -3.8917 | opp_overlap 860807, overlap 860802 TGATAATTGGCCTTG GGCC AATT GGCC TTATTATGCTTGAGA Csac_0763 860311 - 861285 + | alcohol dehydrogenase TERM 839 861490 - 861457 - T 100 -9.8 -5.46706 | opp_overlap 861457 ACTTTAAAATAAAAA TATAACCTCTTCAT GGAATG AAGAAGAGGTTATA TTTTTTTTGGCAAAG TERM 840 861457 - 861490 + T 100 -9.8 -5.75342 | opp_overlap 861457 ACTTTAAAATAAAAA TATAACCTCTTCAT GGAATG AAGAAGAGGTTATA TTTTTTTTGGCAAAG Csac_0764 862361 - 861486 - | signal transduction histidine kinase regulating citrate/malate metabolism TERM 841 861935 - 861922 - G 70 -6.7 -4.00532 | overlap 861915 861918 TTTGCAAATATCAAA GCTGA TAGC TCAGC ACAGCCAAGCCCATA Csac_0765 862854 - 862348 - | hypothetical protein TERM 842 862824 - 862810 - G 91 -5.8 -5.55769 | opp_overlap 862812 GCTTACAAGAAAAAA TACTTT GAG AAAGTA TAGTGGATACAAAAC Csac_0766 862955 - 863851 + | hypothetical protein TERM 843 864809 - 864797 - g 73 -5.5 -4.60487 | TACTACTTTGAAAAA CAGCC ATG GACTG AAGAGTATTTTTTAA Csac_0767 863909 - 864910 + | hypothetical protein TERM 844 864997 - 864986 - g 78 -5.8 -4.83169 | overlap 864969 AGTTTTTGATAAAAA CTGC AAAA GCAG AGTACATTGCTAAAA Csac_0768 864901 - 865869 + | hypothetical protein Csac_0769 865913 - 866905 + | hypothetical protein TERM 845 866945 - 866912 - T 100 -8.1 -5.4492 | opp_overlap 866911 866912 CAGATATAGAAAAAA GGGCTACAAAACCAG AAGA CTTGGTTAGTAGCCC CATTTTACTTTCTAT Csac_0770 867745 - 866957 - | pantothenate kinase Csac_0771 868089 - 867769 - | hypothetical protein TERM 846 867894 - 867912 + g 74 -8.2 -3.6947 | overlap 867897 TTGCAGCCCTGTTTT GAAGTTCT TGC AGAGCTTC TTCTCTTGCCCTTAT Csac_0772 869337 - 868102 - | aspartate aminotransferase TERM 847 869521 - 869531 + H 75 -2.6 -5.61596 | opp_overlap 869521 ATATAGTGTGGAGAA TTTT CGA AAAA TTTTTTTATCAGAAT Csac_0773 869778 - 870464 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Csac_0774 870691 - 872778 + | anaerobic ribonucleoside triphosphate reductase TERM 848 872808 - 872840 + F 100 -7.8 -5.7827 | opp_overlap 872808 AGTTTAATGAAGAAA GGAGCTGTCTTTTT AACTA ATAAAGGCAGTTCC TTTTTTGTTTATATT Csac_0775 873415 - 873732 + | hypothetical protein Csac_0776 873747 - 874976 + | hypothetical protein Csac_0777 875520 - 875020 - | hypothetical protein Csac_0778 875653 - 876603 + | ROK family protein Csac_0779 876575 - 877276 + | GDSL family lipase TERM 849 877287 - 877332 + T 71 -3.2 -5.28983 | opp_overlap 877289, overlap 877281 877288 877289 TTTAAAGAATAAAAG CAGGGCAGGCAAAAGGGGGG TAGCTT TCTTATTTTTGCCTGCCCAA TTTTTATATTTTAAA TERM 850 877289 - 877330 + T 79 -10.2 -2.83831 | opp_overlap 877289, overlap 877288 877287 877281 TAAAGAATAAAAGCA GGGCAGGCAAAAGGGGGG TAGCTT TCTTATTTTTGCCTGCCC AATTTTTATATTTTA Csac_0780 879826 - 877364 - | glycogen/starch/alpha-glucan phosphorylase Csac_0781 881290 - 879857 - | glycogen/starch synthase, ADP-glucose type TERM 851 880769 - 880756 - G 73 -6.7 -4.32678 | opp_overlap 880756 880754, overlap 880753 CGGGCAAAGAAAGAA GGTCA TACA TGACC TCTTTTGGGAATACT Csac_0782 882429 - 881287 - | glucose-1-phosphate adenylyltransferase, GlgD subunit Csac_0783 883627 - 882449 - | glucose-1-phosphate adenylyltransferase Csac_0784 885597 - 883660 - | 1,4-alpha-glucan branching enzyme TERM 852 885851 - 885876 + H 70 -7.1 -3.60048 | opp_overlap 885854, overlap 885850 885854 TTATGTTGAGGGCTA TAATAGTTATA AAAA TGTAACTATTA ATTTTTTAACCCAAG TERM 853 886079 - 886094 + G 74 -4 -5.16237 | overlap 886077 GAATCCATATCAGCT GAACTT TATC AGGTTC TTTTTTGGTGGGCTT TERM 854 886148 - 886136 - g 77 -2.7 -5.4756 | AATTGCAATAAAAAA TTTAC AGG GCAAA AAAATTAAGCTTTCT Csac_0785 885978 - 886889 + | hypothetical protein TERM 855 887694 - 887682 - g 71 -4.9 -4.54047 | CCATTGTATACAAAA TATGT CTT ACATA AAGATGAAGCAGGTT TERM 856 887740 - 887757 + G 73 -3.3 -5.12068 | overlap 887732 CTTCGATGGGCATAG GTGCTCT TTCA GGTGCAC TTTTTGTTGCCTCTA Csac_0786 886920 - 888146 + | major facilitator transporter Csac_0787 888222 - 888914 + | DNA repair protein RadC Csac_0788 890528 - 889005 - | peptidoglycan-binding LysM TERM 857 889046 - 889064 + g 71 -7.4 -3.85817 | overlap 889031 889049 889063 CTGTCAGCTGATGCT GAGGGTCA ATT TGACCATC TTTGTGGCGAAGGCT Csac_0789 890702 - 891049 + | DNA polymerase beta subunit Csac_0790 891030 - 891434 + | HEPN domain-containing protein Csac_0791 891901 - 891431 - | riboflavin synthase Csac_0792 893096 - 891888 - | GTP cyclohydrolase II TERM 858 892049 - 892039 - G 72 -4 -5.01732 | AAGTCTTGCAAAAAA GAAA CTT TTTC AGGGTTAGATGTTGC Csac_0793 893680 - 893102 - | riboflavin synthase subunit alpha Csac_0794 894788 - 893673 - | riboflavin biosynthesis protein RibD TERM 859 893824 - 893810 - G 75 -7.2 -4.2828 | overlap 893820 GTCCACCTATGAAAA CATTGA ATA TCAATG AATACCAGTAATCTG TERM 860 893887 - 893866 - G 73 -2.3 -5.28983 | TTCAAAAGAGAAAAA TTAAGAAAG CTTC CTCCCTCAA CAAGTACTGATACTA TERM 861 894868 - 894828 - R 100 -10.7 -5.4251 | gap 1, opp_overlap 894826 894828 894828, overlap 894833 TTGATACACAAAAAA TTA-AAGCCTCGAAAGTG CTTTTC CACCTTCGAGGCTTGCAA TCTTTTACAAGATGT TERM 862 894862 - 894833 - R 100 -14.4 -4.49041 | opp_overlap 894828 894828 894826, overlap 894828 ACACAAAAAATTAAA GCCTCGAAAGTG CTTTTC CACCTTCGAGGC TTGCAATCTTTTACA Csac_0795 895490 - 895179 - | hypothetical protein Csac_0796 895933 - 895682 - | hypothetical protein TERM 863 895992 - 895981 - H 70 -4.4 -4.80736 | opp_overlap 895981 TATCAAAGAAAGAAA CATC AATG GATG TTTTAGTAATATATA TERM 864 896363 - 896381 + G 81 -8.8 -4.14243 | opp_overlap 896363 TGTGGGAATCATAAT CCAGTCGC TGA GCGGTTGG TTTTACGGTGAGGTG Csac_0797 896166 - 897152 + | alanine racemase TERM 865 898264 - 898280 + G 100 -9.5 -4.88918 | AACACCAATCTTAGA TCCCTTT GCA AAAGGGA TTTTCTTTGGGATAA Csac_0798 897188 - 898696 + | xylulokinase TERM 866 898739 - 898755 + F 100 -10.1 -5.69023 | opp_overlap 898739 898741 TATAATTCAAAAAAA GGGGGCT ATA AGCCCTC TTTTTTTGCTATTTT TERM 867 898755 - 898739 - f 100 -7.9 -5.55698 | opp_overlap 898739, overlap 898741 TATAATTCAAAAAAA GGGGGCT ATA AGCCCTC TTTTTTTGCTATTTT TERM 868 898753 - 898741 - f 73 -9.1 -2.93448 | opp_overlap 898739, overlap 898739 TAATTCAAAAAAAGG GGGCT ATA AGCCC TCTTTTTTTGCTATT TERM 869 900026 - 900010 - g 95 -4.4 -5.99154 | overlap 900012 GAGGAAATAAAAAAA CATCCG TTAAT CGGATA CAACATACTAAAGGA TERM 870 900024 - 900012 - g 71 -4.8 -4.61687 | overlap 900010 GGAAATAAAAAAACA TCCG TTAAT CGGA TACAACATACTAAAG Csac_0799 898840 - 900330 + | metal dependent phosphohydrolase TERM 871 900702 - 900720 + G 100 -8.2 -5.28281 | opp_overlap 900702 ATGTATTTTTATACA GTCCATTT AAC AAATGGGC TTTTATTTCTTTTGT Csac_0800 900392 - 900976 + | response regulator receiver/ANTAR domain-containing protein Csac_0801 900989 - 901672 + | peptidase C26 Csac_0802 901677 - 902459 + | MscS mechanosensitive ion channel Csac_0803 902507 - 904225 + | prolyl-tRNA synthetase TERM 872 904252 - 904283 + F 100 -8.1 -5.35224 | opp_overlap 904252 CGTGAAGACAGTAAA GGGAGCATTGA TTGGCACTTT TCAGTGCTCCC TTTTGTTTTTATGGC Csac_0804 904347 - 904973 + | cyclase family protein Csac_0805 905535 - 905266 - | hypothetical protein TERM 873 906472 - 906486 + H 70 -7.1 -3.70571 | GAAGCTGATTTGATA CCAGC AATAA GCTGG TTTAAGCTATTTATC Csac_0807 907036 - 907983 + | transposase, IS4 family protein Csac_0808 908907 - 908413 - | putative CheW protein TERM 874 908763 - 908783 + g 74 -8.4 -3.66378 | overlap 908766 GATGAGGAATTTCTG TAATTGGC TGAAT GCCAATTA TTTCAGTAACATATC Csac_0809 910856 - 908904 - | CheA signal transduction histidine kinase TERM 875 910437 - 910449 + g 88 -7.7 -4.72729 | TTTTTCAATATTGTC CACAG AGG CTGTG TTTTGATTTTCATTG Csac_0810 912556 - 910889 - | metal dependent phosphohydrolase TERM 876 911573 - 911590 + g 77 -8.5 -3.86311 | TATTGCTATATCTGC GACTTTG GGAT CAAAGTC TTTACCTTTACATCT TERM 877 911751 - 911771 + g 78 -5.5 -5.00616 | opp_overlap 911759 TCAGGATATCCGCTT CCATCAT ACATCTC ATGATGG TTTTTTACCCACACA TERM 878 912319 - 912302 - G 76 -6.3 -4.56775 | ATTTTCGTTCAAAAA GGGAAAA GTGT TCTTCCC ATCAACAATATGGTA TERM 879 912634 - 912660 + H 82 -9.4 -3.71645 | opp_overlap 912634 TTTATTAACTAAAAA GGCACCTGAC TTGTTTC GCCAGGTGCC TTTCAATATCAAATT TERM 880 912660 - 912634 - H 100 -11.6 -4.90266 | opp_overlap 912634 TTTATTAACTAAAAA GGCACCTGAC TTGTTTC GCCAGGTGCC TTTCAATATCAAATT Csac_0811 913603 - 915540 + | methyl-accepting chemotaxis sensory transducer Csac_0812 915594 - 916133 + | putative CheW protein TERM 881 916297 - 916321 + G 85 -12.2 -3.11192 | opp_overlap 916292 916291 TGCGACAAATGGCGA GGAGGCAATC GAAAA GGTTGCCTCC TTGCGTCCTAATGTA TERM 882 916790 - 916814 + G 74 -4.4 -5.06414 | gap 1 ACAAAGCAGCTTGCT GTG-ACTCTTT CGGA AAGGAGTTCAC TTTTTATTAAAGAAG Csac_0813 916187 - 917218 + | response regulator receiver modulated CheB methylesterase Csac_0814 917246 - 918898 + | putative CheA signal transduction histidine kinase Csac_0815 918919 - 920397 + | HEAT repeat-containing PBS lyase TERM 883 920612 - 920602 - g 74 -4 -5.14985 | CGAAACAGATAAAAA TGTT TTC AACA GGTTGTTAGAGCTAA Csac_0816 920414 - 921262 + | protein-glutamate O-methyltransferase TERM 884 921569 - 921559 - g 80 -6.8 -4.79223 | overlap 921560 TCAGAGGAGCAAAAA GCCT TGG AGGC AGGGGCAAATCTGTA TERM 885 921605 - 921595 - g 70 -3.2 -5.0538 | CTGTATTTGAAAAAA CCTG TCA CAAG TGAGGAATTGATTTC Csac_0817 921289 - 921660 + | response regulator receiver protein TERM 886 921745 - 921772 + G 73 -7 -4.14392 | opp_overlap 921748 921759 921760 921763, overlap 921748 GTTGTTGAGACGTAT GAACATCTTGAG AACG CACAAGATGCTC TTTTGCAGCTTGAGA Csac_0818 921676 - 922680 + | putative CheW protein TERM 887 923387 - 923375 - g 70 -5.5 -4.4448 | AAAGTGGCAAACAAA GCCTC AAA GAAGC AAATGATATTATTAC Csac_0819 922681 - 923673 + | methyl-accepting chemotaxis sensory transducer Csac_0820 923700 - 924158 + | response regulator receiver protein Csac_0821 924184 - 926025 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Csac_0822 926178 - 926804 + | phosphoribosyltransferase TERM 888 927355 - 927343 - g 72 -7.7 -3.80733 | opp_overlap 927342 GTGAGGTCATAACAA TTCCC CTT GGGAA ATCTCCTTTAAAGTA Csac_0823 926904 - 927428 + | hypothetical protein TERM 889 927715 - 927703 - g 70 -3.4 -5.03747 | AAATGCTGCAAAAAA GACA CCACT TGTC GATGGTACAGGTGTT Csac_0824 927449 - 928360 + | hypothetical protein TERM 890 928496 - 928479 - g 76 -3.5 -5.36314 | gap 1, opp_overlap 928482, overlap 928482 TAAAATATTAAAAAA GATTCTTC TCA GAAGA-TC TCTGCCAAAATATGA Csac_0825 928384 - 929250 + | hypothetical protein TERM 891 929309 - 929269 - f 93 -8.3 -5.13137 | opp_overlap 929281, overlap 929270 929271 929281 TAAATAAAGTAAAAA GTGGTCAGAAAAGAGCAAA AAG TTTGCTCTTTTCGGGCCTG AGCAAAATCAGGCAG TERM 892 929308 - 929270 - f 95 -11.8 -3.65442 | opp_overlap 929281, overlap 929269 929271 929281 AAATAAAGTAAAAAG TGGTCAGAAAAGAGCAAA AAG TTTGCTCTTTTCGGGCCT GAGCAAAATCAGGCA TERM 893 929307 - 929271 - f 100 -15.3 -2.76825 | opp_overlap 929281, overlap 929270 929269 929281 AATAAAGTAAAAAGT GGTCAGAAAAGAGCAAA AAG TTTGCTCTTTTCGGGCC TGAGCAAAATCAGGC TERM 894 929281 - 929297 + F 86 -9.5 -4.09685 | opp_overlap 929271 929270 929269 929281 AAAGTGGTCAGAAAA GAGCAAA AAG TTTGCTC TTTTCGGGCCTGAGC TERM 895 929297 - 929281 - f 91 -9.5 -4.39002 | opp_overlap 929281, overlap 929271 929270 929269 AAAGTGGTCAGAAAA GAGCAAA AAG TTTGCTC TTTTCGGGCCTGAGC TERM 896 929381 - 929337 - f 100 -11.6 -4.58424 | gap 1, opp_overlap 929337 929338, overlap 929338 CAGCAGGAGAGAAAA GCCTGCG-GGACCCATGTTTT TATT AAAACATGAGTCTTCGCAGGA TTTTTTTATTCTAAA TERM 897 929337 - 929381 + F 100 -11.6 -5.88565 | gap 1, opp_overlap 929337 929338, overlap 929338 CAGCAGGAGAGAAAA GCCTGCGG-GACCCATGTTTT TATT AAAACATGAGTCTTCGCAGGA TTTTTTTATTCTAAA TERM 898 929380 - 929338 - f 100 -15.1 -3.34332 | gap 1, opp_overlap 929337 929338, overlap 929337 AGCAGGAGAGAAAAG CCTGCG-GGACCCATGTTTT TATT AAAACATGAGTCTTCGCAGG ATTTTTTTATTCTAA TERM 899 929338 - 929380 + F 100 -15.1 -4.11512 | gap 1, opp_overlap 929338 929337, overlap 929337 AGCAGGAGAGAAAAG CCTGCGG-GACCCATGTTTT TATT AAAACATGAGTCTTCGCAGG ATTTTTTTATTCTAA TERM 900 929877 - 929889 + G 88 -7.7 -4.79826 | GTTGCTTTAGAAGCT GATGC AAT GCATC TTTTTACTGATGTAT Csac_0826 929472 - 930305 + | cation diffusion facilitator family transporter Csac_0827 930456 - 930944 + | transcription elongation factor GreA Csac_0828 930968 - 932455 + | lysyl-tRNA synthetase TERM 901 932464 - 932493 + F 75 -4.9 -5.0133 | opp_overlap 932464 AGATTAAACCAAAGA GGGGCAGTTATGT TAAA AAACGGCTGCCCC TTTTTTAGACACATA Csac_0829 932565 - 933566 + | hypothetical protein Csac_0830 933632 - 933871 + | regulatory protein, MerR TERM 902 934080 - 934108 + G 87 -11.9 -3.14211 | TTATGAGAAGATGGT CCTCTTGTATG AGGTATG CATACAAGAGG TTACTGGAAGGGCAT Csac_0831 934001 - 935464 + | transposase, putative TERM 903 935576 - 935593 + F 87 -9.9 -3.90291 | opp_overlap 935561 935559 935576 CCCCAGCCGCCAATA CTGTGCA ATTT TGCACAG TTTGGTTGACCAGGT TERM 904 935593 - 935576 - f 81 -9.9 -3.03124 | opp_overlap 935576, overlap 935561 935559 CCCCAGCCGCCAATA CTGTGCA ATTT TGCACAG TTTGGTTGACCAGGT TERM 905 935846 - 935858 + G 78 -5.5 -4.91109 | CTGGCGGGCACGGAC CTTGC AGA GCAGG TTTTTATGGTGACAC TERM 906 936208 - 936197 - g 84 -4.4 -5.46629 | AAGAGTGCAAAAAAA TGCT ACTT AGCA TTCCAACAAAAGAGG Csac_0832 935617 - 936768 + | hypothetical protein TERM 907 937251 - 937241 - g 74 -4 -5.14965 | ACTGTCAGCAAAAAA TTCT GTC AGAA TTGCAGGAAGGTGTA TERM 908 937609 - 937630 + G 70 -8.1 -3.30771 | opp_overlap 937607 TTGAATTTACAACCT CATCTTTTG AGTG CAAAGGATG TTCTAACAGGTGTGA Csac_0833 936765 - 937724 + | putative CoA-substrate-specific enzyme activase TERM 909 937754 - 937772 + F 100 -10.3 -5.46698 | AAAGTATTTTTTCAG CCATGGG CGAAT CCCATGG TTTTTTAGTTTTCCA Csac_0834 937907 - 938629 + | peptidase M42 family protein TERM 910 938640 - 938657 + F 100 -9.9 -5.68489 | AGTAAAGCTTTTTAG GACCTCA GTTT TGAGGTC TTTTTTATTATTGTC Csac_0835 938878 - 939759 + | branched-chain amino acid aminotransferase TERM 911 939837 - 939826 - g 81 -7.2 -4.58685 | opp_overlap 939826 AAAGGTTTTGAAAAA GCGC CTCA GCGC TCGCTTTTCAAGGCA TERM 912 941359 - 941342 - g 77 -2.7 -5.52807 | overlap 941345 AAGAAGAAATAAAAA GAAGACT TGAA AGTCTTG GGCCATTTGAGCCAA TERM 913 941356 - 941345 - g 71 -4.4 -4.78345 | overlap 941342 AAGAAATAAAAAGAA GACT TGAA AGTC TTGGGCCATTTGAGC Csac_0836 939790 - 941448 + | dihydroxy-acid dehydratase TERM 914 942876 - 942895 + G 76 -6.4 -4.52589 | gap 1, overlap 942894 TGGTGTGTTGGGCAT GGTTC-GCC AGT GGCAGGACC TTTTCTATGGAAAAA TERM 915 943111 - 943084 - g 80 -6.2 -4.96106 | gap 1 GACAAAGACGAAAAA GCGCTGCCAATTG TCC CACCCGGC-GCGC CAATTGATGAGATTA Csac_0837 941476 - 943134 + | acetolactate synthase, large subunit, biosynthetic type TERM 916 943492 - 943440 - T 100 -8.6 -5.46706 | opp_overlap 943449, overlap 943444 943446 943449 AGTTCAAAATAAAAA TAAAGATAAGAGGGGCTTTTCACA AAAAA TTTGAAAAGCCCCTCTTTTAACTA TTAAATATCCAAAAA TERM 917 943488 - 943444 - T 100 -11.6 -5.18409 | opp_overlap 943449, overlap 943440 943446 943449 CAAAATAAAAATAAA GATAAGAGGGGCTTTTCACA AAAAA TTTGAAAAGCCCCTCTTTTA ACTATTAAATATCCA TERM 918 943486 - 943446 - T 100 -14.2 -4.15156 | opp_overlap 943449, overlap 943444 943440 943449 AAATAAAAATAAAGA TAAGAGGGGCTTTTCACA AAAAA TTTGAAAAGCCCCTCTTT TAACTATTAAATATC TERM 919 943449 - 943483 + T 100 -15.9 -4.28656 | opp_overlap 943446 943444 943440 943449 TAAAAATAAAGATAA GAGGGGCTTTTCACA AAAAA TTTGAAAAGCCCCTC TTTTAACTATTAAAT TERM 920 943483 - 943449 - T 100 -15.9 -4.11447 | opp_overlap 943449, overlap 943446 943444 943440 TAAAAATAAAGATAA GAGGGGCTTTTCACA AAAAA TTTGAAAAGCCCCTC TTTTAACTATTAAAT Csac_0838 944360 - 943716 - | VanZ family protein Csac_0839 945316 - 944525 - | IstB ATP binding domain-containing protein Csac_0840 945636 - 945313 - | hypothetical protein Csac_0841 945778 - 945954 + | hypothetical protein Csac_0842 947156 - 945927 - | transposase, mutator type TERM 921 946020 - 946035 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 922 946557 - 946571 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA Csac_0843 947176 - 948090 + | hypothetical protein TERM 923 948724 - 948710 - g 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 924 949261 - 949246 - g 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_0844 948125 - 949354 + | transposase, mutator type Csac_0845 949351 - 949740 + | transposase IS116/IS110/IS902 family protein Csac_0846 951415 - 950123 - | integrase catalytic subunit Csac_0847 953443 - 954036 + | hypothetical protein Csac_0848 954056 - 954643 + | hypothetical protein TERM 925 954755 - 954781 + F 74 -6.6 -4.26881 | overlap 954758 TCTATGTCAAGAGTT GGGGTGGGTATT CTG AATGTCCACTTC TTTAGTTTTATCAAG TERM 926 954758 - 954778 + F 74 -6.9 -4.23876 | overlap 954755 ATGTCAAGAGTTGGG GTGGGTATT CTG AATGTCCAC TTCTTTAGTTTTATC TERM 927 954862 - 954878 + F 75 -5 -5.01845 | ACAATACAACCTTTA CCCACC TCCCC GGCGGG TTTTTAATTATTCTC Csac_0849 955212 - 955736 + | transposase, mutator type Csac_0851 957037 - 957642 + | hypothetical protein TERM 928 957966 - 957956 - g 78 -4 -5.34857 | GCAAATAAAATAAAA GTTT TTC AAAC GGCTGTTTTAGGAGA Csac_0852 957662 - 958333 + | hypothetical protein TERM 929 958466 - 958523 + T 82 -10.9 -2.50665 | gap 1, opp_overlap 958465, overlap 958466 958515 TTTCTATTAATCTAG CTCTTTGTCAAAAG-AGAGGTTGATATT TAG AATGTTCACCCCAACTTTTGACAAAGAG CCTTTATCTTCTATT Csac_0853 959484 - 958534 - | glycosidase, PH1107-related TERM 930 959578 - 959558 - H 75 -2.7 -5.67967 | overlap 959561 959569 ATCATTACAAAAAAA TTATTAAAA TAT TTTTAAAAA ACTGTCAAGGACAAA TERM 931 959592 - 959580 - H 70 -4.1 -5.04987 | overlap 959581 AATATTTTTAAAAAA CTGTC AAG GACAA AGAAAAACAAAAATT Csac_0854 959628 - 960044 + | hypothetical protein Csac_0856 962697 - 961540 - | hypothetical protein TERM 932 962709 - 962723 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT TERM 933 962966 - 962947 - H 100 -9.4 -5.37865 | opp_overlap 962948 TGAATAATGAAAAAA TGATAAGG TTAT CCTTATCA AGAGAGGTGGAGGGA TERM 934 963093 - 963126 + H 80 -7.7 -4.17048 | gap 1, overlap 963103 963122 AGCTTTCTGAGAGAT GAGGATAAAACTTTTT ACA AGAAAGTTTTG-CCTC TTCTTTTCAGAAGGG TERM 935 963122 - 963143 + H 93 -10.9 -3.98312 | overlap 963093 TTACAAGAAAGTTTT GCCTCTTCT TTTC AGAAGGGGC TTTAAATTTTATATA Csac_0857 963214 - 964404 + | S-adenosylmethionine synthetase Csac_0858 964488 - 964892 + | hypothetical protein TERM 936 964919 - 964951 + F 93 -9.3 -4.92828 | TATAAGCTATCCGTA TCCCCTTTTGC AGCTGGCATAA GCAAAAGGGGA TTTATTTTTGCCTTT TERM 937 965469 - 965489 + G 86 -9.9 -4.0802 | CAACTTTATTGCTGG GCTAAAAAT GTT ATTTTTAGC TTTACTTATTCCGCT Csac_0859 965029 - 965613 + | hypothetical protein TERM 938 967497 - 967486 - g 70 -3 -5.24129 | opp_overlap 967486 CTTGTTGACAAAAAA TGTA TCTT TACA GCTTTTTATCCTCAT Csac_0860 965668 - 968079 + | single-stranded-DNA-specific exonuclease RecJ Csac_0861 968079 - 968510 + | hypothetical protein Csac_0862 968552 - 969487 + | band 7 protein Csac_0863 969533 - 969895 + | hypothetical protein Csac_0864 969924 - 972650 + | hypothetical protein TERM 939 972753 - 972804 + F 83 -10.4 -3.30825 | opp_overlap 972758 972763, overlap 972758 972763 GAAACTCCTAAATAT TGAAATTAAAGGGGCTGTTACA TCAACTTT TGAAACAGCCCCTTTTATTTTG TGTCTATTTTATAGC TERM 940 972758 - 972799 + F 95 -10.3 -4.7189 | opp_overlap 972758 972763, overlap 972753 972763 TCCTAAATATTGAAA TTAAAGGGGCTGTTACA TCAACTTT TGAAACAGCCCCTTTTA TTTTGTGTCTATTTT TERM 941 972799 - 972758 - f 89 -10.3 -3.81137 | opp_overlap 972758 972753 972763, overlap 972763 TCCTAAATATTGAAA TTAAAGGGGCTGTTACA TCAACTTT TGAAACAGCCCCTTTTA TTTTGTGTCTATTTT TERM 942 972794 - 972763 - f 90 -10.2 -4.10159 | opp_overlap 972758 972753 972763, overlap 972758 AATATTGAAATTAAA GGGGCTGTTACA TCAACTTT TGAAACAGCCCC TTTTATTTTGTGTCT TERM 943 972763 - 972794 + F 100 -10.2 -5.24647 | opp_overlap 972763 972758, overlap 972758 972753 AATATTGAAATTAAA GGGGCTGTTACA TCAACTTT TGAAACAGCCCC TTTTATTTTGTGTCT Csac_0865 973221 - 974507 + | class II aldolase/adducin family protein Csac_0866 974534 - 975589 + | class II aldolase/adducin family protein TERM 944 975629 - 975600 - T 93 -5 -6.01725 | opp_overlap 975600 AATAAAAACAAAAAA GCTACAGTCC GACATAGCAT GGGCTGTAGC TTTTTTCCTTTTTGT TERM 945 975600 - 975629 + T 100 -7.9 -5.56112 | opp_overlap 975600 AATAAAAACAAAAAA GCTACAGTCCG ACATAGCA TGGGCTGTAGC TTTTTTCCTTTTTGT Csac_0867 976963 - 975653 - | hypothetical protein TERM 946 975771 - 975753 - G 70 -3 -5.24129 | opp_overlap 975745 TTCTTTGAGAAAAAA CCCAAGGT TTT ATCGTGGG TTGCCATTATTTCAT Csac_0868 977761 - 976982 - | sorbitol-6-phosphate dehydrogenase Csac_0869 977967 - 979232 + | alcohol dehydrogenase TERM 947 979337 - 979301 - g 76 -9.6 -3.41126 | gap 1, opp_overlap 979307, overlap 979307 TTAGAAATGGTAGAA TACGAAGATGCTC-TGC ACTT GCAAGAGCGTCTTCATA AGCTAAGAGTAGCAA Csac_0870 979265 - 979972 + | lipoate-protein ligase B TERM 948 980152 - 980169 + G 79 -7.1 -4.50976 | ATTTTAGGAGATGTT TGTACAA GAAA TTGTACA TTTTGTGATGTCAAA Csac_0871 979969 - 980826 + | lipoyl synthase TERM 949 980931 - 980913 - f 70 -6.1 -4.1711 | opp_overlap 980920 980923, overlap 980915 980923 ATTATTTTGAATAAA GATGAAA TAATT TTTCATC ATAATGAAAAAATAT TERM 950 980950 - 980915 - f 89 -10.8 -3.68324 | opp_overlap 980920 980923, overlap 980913 980923 980944 TATTTTGAATAAAGA TGAAATAATTTTTCAT CATA ATGAAAAAATATTTCA AATAATGTGTTACCA TERM 951 980942 - 980923 - f 71 -6.6 -4.13037 | opp_overlap 980920 980923, overlap 980913 980915 ATAAAGATGAAATAA TTTTTCAT CATA ATGAAAAA ATATTTCAAATAATG TERM 952 980954 - 980944 - f 72 -2.6 -5.33848 | opp_overlap 980920, overlap 980915 ATCATAATGAAAAAA TATT TCA AATA ATGTGTTACCAACTA Csac_0872 980993 - 982375 + | dehydrogenase catalytic domain-containing protein Csac_0873 982421 - 983785 + | dihydrolipoamide dehydrogenase TERM 953 983915 - 983905 - g 78 -5.4 -4.91285 | ATCAATACAACAAAA CTCT TGA AGAG GAAAGACAGAACTTT Csac_0874 983814 - 986285 + | transketolase, central region Csac_0875 986308 - 987093 + | DeoR family transcriptional regulator TERM 954 987180 - 987160 - g 75 -9.7 -2.82516 | opp_overlap 987159 987158 TGCCGGAGTATGAGA GGGCAAAAG AGG CTTATGCCC AGTTTGGAGTTGACA Csac_0876 987120 - 988400 + | L-rhamnose isomerase Csac_0877 989955 - 988471 - | L-fucose isomerase-like protein TERM 955 989144 - 989128 - G 75 -7.3 -4.254 | overlap 989119 GTAACATGGAACAAA TCCAAAC TGT GTCTGGA ACGCTGGCCAGCACT TERM 956 991114 - 991103 - g 81 -4.4 -5.27923 | overlap 991082 CAATCTTAGAAAAAA TTGC ACAA GCAA CAGAGATTGATATAC Csac_0878 990223 - 991539 + | trigger factor TERM 957 992011 - 991997 - g 70 -5.7 -4.4296 | opp_overlap 991997, overlap 991991 CAACAGACATCAAAA TCCAC GCTGA GTGGA TATTGAAGATAAAAC Csac_0879 991582 - 992169 + | ATP-dependent Clp protease, proteolytic subunit ClpP clpX 992196 - 993497 + | ATP-dependent protease ATP-binding subunit TERM 958 993572 - 993538 - f 100 -11.6 -4.11275 | opp_overlap 993538, overlap 993541 993544 ATAAGCTAAATGAAA GAAGAAGGCTGG TTTTTGACTTT CCAGCCTTCTTC TTTTTGAATTTTTCA TERM 959 993538 - 993572 + F 100 -11.6 -4.92239 | opp_overlap 993538 993541 993544 ATAAGCTAAATGAAA GAAGAAGGCTGG TTTTTGACTTT CCAGCCTTCTTC TTTTTGAATTTTTCA TERM 960 993569 - 993541 - f 80 -7.5 -4.15998 | opp_overlap 993538, overlap 993538 993544 AGCTAAATGAAAGAA GAAGGCTGG TTTTTGACTTT CCAGCCTTC TTCTTTTTGAATTTT TERM 961 993698 - 993682 - f 75 -9.5 -2.82856 | overlap 993681 AATTAATAGAAAGAG GGACTTT ACA AAAGTCC GGTGAGAGAATTTGT Csac_0881 993710 - 994714 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 962 994898 - 994910 + G 79 -6.9 -4.4078 | TAGGGGTGAACTTTA GGGCG CTT TGCCC TTTTCATTCAGAGAA TERM 963 995030 - 995050 + G 73 -6.9 -4.07568 | GTATGGAAAATTTGA CCTTTACTG AGG CACTAAAGG TTTTAGCCGAGAAGG TERM 964 995934 - 995907 - g 76 -4.2 -5.19916 | overlap 995910 AAAAGAGCTAAAAAA CCAGTATGATTT GACC AAATCAGACCAG AAATTTAGATTTGTA TERM 965 996244 - 996231 - g 73 -2.3 -5.40625 | overlap 996224 AGAGGAGATAAAAAA CCTTC TTAC GGAGG AGGACTTTTACACCG Csac_0882 994720 - 996570 + | DNA primase Csac_0883 996567 - 997802 + | RpoD family RNA polymerase sigma factor TERM 966 997811 - 997839 + T 100 -7.4 -5.4593 | opp_overlap 997811 GGAGTAAAAATGAAA GGGGATTACTAG GTAAG CAGGTAGTCCCC TTTTTGTTGTTTTAA TERM 967 998066 - 998036 - T 74 -7.6 -3.90856 | AATCTTGTAATGAAA GGGGCTATCCAA TTATTTT TTGGACAGCCAC TCATAATTTGTAAAT Csac_0884 999040 - 998084 - | hypothetical protein TERM 968 998782 - 998797 + g 77 -2.6 -5.55698 | CATTCACCTTTGCTT GAAGAT TAGC ATTTTC TTTTTTTAGCTTGTC Csac_0885 999186 - 1000742 + | hypothetical protein TERM 969 1001043 - 1001062 + G 70 -3 -5.12987 | gap 1 CTGTAAAGTTTGCGT TGGCATTTT TGA AAAAT-CCA TTTGTTTTTATTTCA Csac_0886 1000748 - 1001884 + | hypothetical protein Csac_0887 1001952 - 1003214 + | hypothetical protein Csac_0888 1003277 - 1005469 + | regulator of chromosome condensation, RCC1 TERM 970 1006254 - 1006243 - g 70 -3 -5.1675 | GCATGCACCAAAAAA TTCT TGAA AGAA AATATTAAAAAGTTA Csac_0889 1005625 - 1006728 + | hypothetical protein Csac_0890 1007252 - 1007728 + | hypothetical protein TERM 971 1007872 - 1007906 + F 79 -8.7 -3.95653 | opp_overlap 1007876 1007878, overlap 1007878 CACAAGTTATGCATA TTAAGAGCAGGGG TTACTCACT CCCCTGCTTTTGA TTTGTCAGGTTATTT TERM 972 1007878 - 1007900 + F 82 -7.7 -4.61873 | opp_overlap 1007878 1007876, overlap 1007872 TTATGCATATTAAGA GCAGGGG TTACTCACT CCCCTGC TTTTGATTTGTCAGG TERM 973 1008441 - 1008451 + F 85 -6.8 -5.10208 | opp_overlap 1008441 TGAGGTTTTGGATAA GGTC TTA GACC TTTTTATTGAACTTG TERM 974 1009772 - 1009760 - f 80 -9.1 -3.60627 | overlap 1009736 GGAGGTCACTCCAAA GAGCC TAA GGCTC AGAAAAAAGATTTTA TERM 975 1009857 - 1009839 - f 80 -6 -5.04265 | opp_overlap 1009839, overlap 1009833 AAAAAAGAGGAAAAA GAGCCT GTATTTT AGGCTC TTTTTTATTACCATC TERM 976 1009839 - 1009857 + F 93 -6.7 -5.46657 | opp_overlap 1009833 1009839 AAAAAAGAGGAAAAA GAGCCTG TATTT TAGGCTC TTTTTTATTACCATC TERM 977 1010421 - 1010411 - g 72 -4 -5.02476 | ATATTCTTCAAAAAA TGTA AAA TACA AGCTTGAAGGGTTTT Csac_0893 1009944 - 1010951 + | aminodeoxychorismate lyase Csac_0894 1010956 - 1011594 + | O-methyltransferase family protein Csac_0895 1011609 - 1012835 + | peptidase U32 Csac_0896 1012925 - 1013587 + | sporulation sigma factor SigK Csac_0897 1013767 - 1014234 + | hypothetical protein Csac_0898 1014242 - 1015039 + | dihydropteroate synthase, DHPS TERM 978 1015945 - 1015959 + G 71 -5 -4.58283 | GTGGGTTTGCTTGCA CTGTTT AGA AGACAG TTTTTAGGAGCATTA Csac_0899 1015066 - 1016367 + | hypothetical protein Csac_0900 1016361 - 1017683 + | small GTP-binding protein TERM 979 1017884 - 1017894 + G 70 -5.4 -4.49958 | GATGTTTTGAAAGGT GTTG TAG CAAC TTTGTTTGCTAAGAT Csac_0901 1017683 - 1018291 + | hypothetical protein Csac_0902 1018291 - 1019016 + | methyltransferase type 12 Csac_0903 1019097 - 1019297 + | cold-shock DNA-binding domain-containing protein TERM 980 1019298 - 1019321 + F 100 -9.6 -5.95286 | opp_overlap 1019295 1019298 AGAAAGGTAAAATAA GCTTCTGGCA GTTT TGCTGGAAGC TTTTTTGTTTTTGGT TERM 981 1019844 - 1019858 + G 70 -8.6 -3.10732 | overlap 1019830 1019838 TTTTGCTTTGTCAGA GCAGAT TCC ATCTGC TGTTGCACTTGGTGT Csac_0904 1019392 - 1020249 + | Hsp33 protein TERM 982 1020410 - 1020381 - f 77 -7.9 -4.03023 | gap 1, overlap 1020379 1020382 AAGTATAATAAAACA TGTCGCCGCTG-AT TAA ATGCGGCGACGACA AAAAAAACAATAAAT TERM 983 1020406 - 1020382 - f 81 -10 -3.00187 | overlap 1020381 1020379 AGTATAATAAAACAT GTCGCCGC TGATTAAAT GCGGCGAC GACAAAAAAAACAAT TERM 984 1020886 - 1020909 + F 100 -7.5 -5.98675 | opp_overlap 1020886 ATGAAAGTTATCAAA CCTGCTTAA GAAAAA TTGAGCAGG TTTTTTGTTTTTCTG TERM 985 1021441 - 1021482 + G 86 -9.4 -4.28254 | TGCAGATAGCTCTTC GTGGCGGTGCTGTGACAG GTTTGG CTGTGACAGCCCTGTCGC TTTTGGGTGTTGCAA TERM 986 1021558 - 1021548 - g 70 -5.4 -4.43859 | overlap 1021538 GAGAATCTTATAAAA GAAG CAC CTTC GCTGATTGTCGGATT hppA 1021029 - 1023164 + | membrane-bound proton-translocating pyrophosphatase TERM 987 1023199 - 1023236 + F 100 -13.5 -6.20267 | opp_overlap 1023199 1023201 1023203, overlap 1023203 AAGTTTTTGAAAAAA GAGAGGGGGAAGGCATT GAAA AAAGCCTTCCCCCTTTA TTTTTTTGTTTTTGA TERM 988 1023236 - 1023199 - f 100 -11.3 -5.01732 | opp_overlap 1023199 1023203, overlap 1023201 1023203 AAGTTTTTGAAAAAA GAGAGGGGGAAGGCATT GAAA AAAGCCTTCCCCCTTTA TTTTTTTGTTTTTGA TERM 989 1023234 - 1023201 - f 100 -13.9 -4.13561 | opp_overlap 1023199 1023203, overlap 1023199 1023203 GTTTTTGAAAAAAGA GAGGGGGAAGGCATT GAAA AAAGCCTTCCCCCTT TATTTTTTTGTTTTT TERM 990 1023203 - 1023232 + F 100 -16.5 -5.36181 | opp_overlap 1023201 1023199 1023203, overlap 1023199 TTTTGAAAAAAGAGA GGGGGAAGGCATT GAAA AAAGCCTTCCCCC TTTATTTTTTTGTTT TERM 991 1023232 - 1023203 - f 100 -16.5 -3.66166 | opp_overlap 1023203 1023199, overlap 1023201 1023199 TTTTGAAAAAAGAGA GGGGGAAGGCATT GAAA AAAGCCTTCCCCC TTTATTTTTTTGTTT Csac_0906 1023341 - 1023667 + | hypothetical protein TERM 992 1023708 - 1023734 + F 80 -5.8 -5.05782 | opp_overlap 1023711, overlap 1023712 AGGTGTTTTGTAAGG AGAGGGACTGCG CTT TGCAGTCCTTTA TTTTTTGGACTAAAT TERM 993 1023712 - 1023730 + F 100 -11 -5.05153 | opp_overlap 1023711, overlap 1023708 GTTTTGTAAGGAGAG GGACTGCG CTT TGCAGTCC TTTATTTTTTGGACT Csac_0907 1024051 - 1024389 + | hypothetical protein gatC 1024580 - 1024864 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 994 1026191 - 1026204 + G 74 -8.1 -3.70511 | opp_overlap 1026189 1026187, overlap 1026176 1026189 GTGCCTGTAAATATT GCAGG ACTT CCTGC TATTTCTATTCCATG Csac_0909 1024895 - 1026355 + | glutamyl-tRNA(Gln) amidotransferase, A subunit Csac_0910 1026396 - 1027838 + | glutamyl-tRNA(Gln) amidotransferase, B subunit TERM 995 1027816 - 1027846 + F 84 -5.5 -5.32608 | gap 1, overlap 1027820 TAAATGAAATCTTAA GAGAGGAGCTTGAG AAAA TTTAGGCTCC-CTC TTTTTTAAATTTTTT Csac_0911 1027880 - 1028209 + | DNA polymerase beta subunit Csac_0912 1028181 - 1028582 + | HI0074 family nucleotidyltransferase substrate binding protein Csac_0913 1028677 - 1029933 + | peptidase M16 domain-containing protein TERM 996 1030355 - 1030342 - g 73 -2.3 -5.26119 | TGTTGAAAAAGAAAA GGGTA TAAT TGCCC AAGAGATAAGAATGT Csac_0914 1029935 - 1031215 + | peptidase M16 domain-containing protein TERM 997 1031437 - 1031460 + G 73 -9 -3.35224 | opp_overlap 1031440, overlap 1031435 1031440 1031446 TACTTGACATTGCAA TAATTGCAAC ACCT GTTGCGATTA TATTTGCAAGGGTGT Csac_0915 1031241 - 1032044 + | prolipoprotein diacylglyceryl transferase TERM 998 1032389 - 1032409 + F 100 -10.5 -6.35605 | opp_overlap 1032389 GAAAGACATAAAAAA TAGGGCGAT TGA ATTGCCCTA TTTTTTTTTCTCTTA TERM 999 1032409 - 1032389 - f 100 -8.3 -5.51046 | opp_overlap 1032389 GAAAGACATAAAAAA TAGGGCGAT TGA ATTGCCCTA TTTTTTTTTCTCTTA Csac_0916 1032493 - 1032924 + | MraZ protein TERM 1000 1033522 - 1033508 - g 75 -7.1 -4.23647 | AAATGATTTAATAAA CTCGG TTGTC CCGAG ACCAAAAGACGGTTC Csac_0917 1032951 - 1033874 + | S-adenosyl-methyltransferase MraW Csac_0918 1033902 - 1034396 + | septum formation initiator TERM 1001 1035637 - 1035620 - g 78 -5.6 -5.00616 | GGTTTGGGCAAAAAA CAGGAA TTGATC TTCCTG GTGAGGCGAAGGGCA Csac_0919 1034431 - 1036590 + | stage V sporulation protein D Csac_0920 1036617 - 1038083 + | UDP-N-acetylmuramyl-tripeptide synthetase Csac_0921 1038080 - 1039432 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 1002 1039848 - 1039823 - g 73 -3.3 -5.07567 | opp_overlap 1039840 GTATATTGTAAAAAA GTATTTAGGCA CCGA TGTCTACATAC CCATTTTGAACAGGT TERM 1003 1039840 - 1039870 + G 72 -8.4 -3.60296 | opp_overlap 1039823 1039848 ATTTAGGCACCGATG TCTACATACCCATT TTG AACAGGTATGTAGA TTTGAGCTGGGCATA Csac_0922 1039437 - 1040393 + | phospho-N-acetylmuramoyl-pentapeptide-transferase Csac_0923 1040411 - 1041772 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase Csac_0924 1041799 - 1042896 + | cell division protein FtsW Csac_0925 1042893 - 1044005 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 1004 1044092 - 1044081 - gf 71 -4.4 -4.7889 | ACAAATATGCAAAAA CTCA TTAT TGAG GGTCCAACTTTTTTA TERM 1005 1044403 - 1044393 - gf 74 -4 -5.22943 | AGCAAATTCAAAAAA GTAA GAC TTAC AAACCACCCTGGGGG Csac_0926 1044072 - 1045334 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Csac_0927 1045309 - 1046112 + | polypeptide-transport-associated domain-containing protein TERM 1006 1046250 - 1046240 - g 81 -5.4 -5.12617 | overlap 1046241 TAATGAGCTAAAAAA CCTT GAA AAGG CAAGAGCAATTGAAC TERM 1007 1046790 - 1046776 - g 73 -7.2 -4.14739 | opp_overlap 1046775 1046776 CTATTGAGGTGAAAA TTGAAG AGG CTTCAA ATATTGTAATTCCGA Csac_0928 1046109 - 1046861 + | hypothetical protein TERM 1008 1047125 - 1047102 - g 78 -9.7 -3.33492 | opp_overlap 1047124, overlap 1047124 GTATTTAGGTGACAA GCTTGGTAT TCCTCT ATACCAAGC AGCCGTTGTTGCGTT Csac_0929 1046848 - 1047234 + | hypothetical protein Csac_0930 1047227 - 1048309 + | cell division protein FtsZ TERM 1009 1048319 - 1048345 + F 100 -7.2 -5.60993 | opp_overlap 1048320, overlap 1048320 AAATAAAGCAAAAAG ACCCTCTGCAGA ATG TATGCAGGGGGG TTTTTTTGTGGCGAA TERM 1010 1048344 - 1048320 - f 82 -8.5 -4.15237 | opp_overlap 1048319 1048320 AATAAAGCAAAAAGA CCCTCTGCAGA ATG TATGCAGGGGG GTTTTTTTGTGGCGA TERM 1011 1048320 - 1048344 + F 89 -10.7 -3.95873 | opp_overlap 1048320, overlap 1048319 AATAAAGCAAAAAGA CCCTCTGCAGA ATG TATGCAGGGGG GTTTTTTTGTGGCGA Csac_0931 1048488 - 1049321 + | peptidase U4, sporulation factor SpoIIGA Csac_0932 1049342 - 1050082 + | sporulation sigma factor SigE Csac_0933 1050170 - 1050937 + | sporulation sigma factor SigG TERM 1012 1050991 - 1051040 + F 77 -7.5 -4.07687 | gap 1, opp_overlap 1050998, overlap 1050998 AATAATCTAAAACCG TTAAT-GAGCCTTTTACCTTATTT CAA AAACAAGGTAAAAGGCTTTGTGAA TTTTAAGGGGGCAAT TERM 1013 1051032 - 1050998 - f 100 -18.2 -2.75229 | opp_overlap 1050991 1050998 TAAAACCGTTAATGA GCCTTTTACCTTATTT CAA AAACAAGGTAAAAGGC TTTGTGAATTTTAAG TERM 1014 1050998 - 1051032 + F 100 -16 -4.06179 | opp_overlap 1050998, overlap 1050991 TAAAACCGTTAATGA GCCTTTTACCTTATTT CAA AAACAAGGTAAAAGGC TTTGTGAATTTTAAG TERM 1015 1052282 - 1052272 - g 76 -6.8 -4.47328 | AAGGGTATTATAAAA TGCC TGA GGCA ACAAAACAGGCAATT Csac_0934 1051062 - 1052723 + | AMP-dependent synthetase and ligase Csac_0935 1052804 - 1054105 + | diaminopimelate decarboxylase TERM 1016 1054384 - 1054372 - g 83 -6.3 -5.0809 | AAGAAACTACAAAAA TCCAA AGG TTGGA ATGGGTCTTACAGCT Csac_0936 1054130 - 1054762 + | peptidase M50 Csac_0937 1054801 - 1055778 + | tryptophanyl-tRNA synthetase Csac_0938 1055775 - 1056476 + | chromosome segregation and condensation protein ScpA Csac_0939 1056495 - 1057028 + | putative transcriptional regulator TERM 1017 1057039 - 1057009 - f 100 -14.2 -3.73281 | opp_overlap 1057011, overlap 1057000 1057011 AAAAGATTATGCAAA GAGAGGATACATCA ATT TGATGTATCCTCTT TTTATTTTGTGGAAA TERM 1018 1057011 - 1057037 + F 100 -16.8 -5.54907 | opp_overlap 1057009 1057000 1057011 AAGATTATGCAAAGA GAGGATACATCA ATT TGATGTATCCTC TTTTTATTTTGTGGA TERM 1019 1057037 - 1057011 - f 100 -16.8 -3.43511 | opp_overlap 1057011, overlap 1057009 1057000 AAGATTATGCAAAGA GAGGATACATCA ATT TGATGTATCCTC TTTTTATTTTGTGGA Csac_0940 1057104 - 1057649 + | hypothetical protein Csac_0941 1057633 - 1058016 + | tubulin TERM 1020 1058012 - 1058037 + F 100 -13.5 -5.7946 | opp_overlap 1058012 ATATTATTCAGAGAA GATGATAGCAA AAGC TTGCTATCATC TTTTTTTGTTCCGCA TERM 1021 1058037 - 1058012 - f 100 -13.5 -3.53164 | opp_overlap 1058012 ATATTATTCAGAGAA GATGATAGCAA AAGC TTGCTATCATC TTTTTTTGTTCCGCA Csac_0942 1058104 - 1058691 + | hypothetical protein TERM 1022 1058851 - 1058837 - f 77 -4.2 -5.38398 | AGAAAAATAGAAAAA CTACCA GGA TGGGAG GACAGCCTACTATGA Csac_0943 1058863 - 1059963 + | hypothetical protein TERM 1023 1059997 - 1059983 - f 72 -7.2 -3.86897 | opp_overlap 1059986, overlap 1059986 TTTATTTTTTACAAA TGACTT GTT AAGTCA AGATATGTTATACTA TERM 1024 1061525 - 1061511 - g 75 -8.6 -3.58869 | TATAAATGGAGATAA GATTCC AGT GGAATC AAGGATAATAGCGAT Csac_0944 1060066 - 1061730 + | metal dependent phosphohydrolase Csac_0945 1061717 - 1062841 + | putative transcriptional regulator TERM 1025 1063394 - 1063416 + G 71 -4.8 -4.58943 | opp_overlap 1063386 GATACAATCTTTGCT GCAAGGAACA ATT TGTCACTTGC TTATTTTTATATGGG TERM 1026 1063574 - 1063559 - g 71 -4.8 -4.67173 | GAACTCAAAAAACAA CTAAAA ACAA TTTTAG AGCTGAAAACATACG Csac_0946 1062860 - 1064245 + | TPR repeat-containing protein TERM 1027 1065516 - 1065534 + G 78 -5.4 -4.97666 | ATGAAATAAAAGGTG TAATTGAT CTT ATCGATTA TTTTTATAGTGTATT thrS 1064312 - 1066231 + | threonyl-tRNA synthetase TERM 1028 1066273 - 1066292 + F 72 -3.5 -5.23016 | ATTAATGAGAACATG GGCTGTT TAATGT GGCAGCC TTTTTTAAATTCTTT TERM 1029 1066742 - 1066732 - g 75 -5.4 -4.78764 | overlap 1066735 TAAATGGATTAAAAA CAAC AGT GTTG GCATCATCACCGGAA TERM 1030 1067104 - 1067089 - g 74 -2.6 -5.25699 | overlap 1067090 ATCACAGAATAAAAA CTTATC ATGG GATAAA AGTTGGGCTTGCAAC Csac_0948 1066347 - 1067564 + | glutamate-1-semialdehyde 2,1-aminomutase TERM 1031 1068158 - 1068144 - g 84 -11.4 -3.26471 | opp_overlap 1068144 GTATCGGGATATCAA CAGGGG GTC CCCCTG TTTTAGAGAAGATGT TERM 1032 1068144 - 1068158 + G 91 -11.4 -4.08394 | opp_overlap 1068144 GTATCGGGATATCAA CAGGGG GTC CCCCTG TTTTAGAGAAGATGT Csac_0949 1067639 - 1068676 + | response regulator receiver modulated CheB methylesterase TERM 1033 1068710 - 1068749 + T 100 -11 -4.36914 | opp_overlap 1068715 TAATATGGTTTGTTA TTAAAGATGACCACAA ATATTTGA TGGTGGTCATCTTTAA TTTTGTACACAAAAA Csac_0950 1069866 - 1068694 - | hypothetical protein TERM 1034 1069878 - 1069892 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT TERM 1035 1072648 - 1072633 - g 72 -7.6 -3.66658 | opp_overlap 1072633 1072632 AAGACTTGTAAAAGA GGATGT ATAC ACATCC ATTCATATAGAGGAA rpoB 1070225 - 1073914 + | DNA-directed RNA polymerase subunit beta TERM 1036 1074108 - 1074090 - g 74 -4.6 -5.00616 | opp_overlap 1074072 TTTTTTGTGAAAAAA TCTTTGGT CCG ACAAAAGA CTGGGAGTGTCATTG TERM 1037 1074395 - 1074383 - g 74 -2.7 -5.38951 | AACTTAGAGAAAAAA CAAAT ACT ATCTG AAAAGGAATACAGGG TERM 1038 1075108 - 1075096 - g 79 -3.4 -5.55695 | TAACAATATAAAAAA TGCT AAAAA AGCA GTCGAAAGACAAAGA Csac_0952 1073927 - 1077433 + | DNA-directed RNA polymerase subunit beta' TERM 1039 1077448 - 1077484 + T 78 -9.6 -3.33261 | opp_overlap 1077448 AAGAGATTTTTAAAA GGGGTATGTCTTAA AAAGAAAGC TTAAGGCATGCCCC TTGTGAAACTTCAAA Csac_0953 1078609 - 1077458 - | hypothetical protein TERM 1040 1078621 - 1078635 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT Csac_0954 1078865 - 1079122 + | ribosomal protein L7Ae/L30e/S12e/Gadd45 rpsL 1079148 - 1079585 + | 30S ribosomal protein S12 Csac_0956 1079657 - 1080130 + | 30S ribosomal protein S7 TERM 1041 1080637 - 1080623 - g 78 -6.4 -4.54253 | opp_overlap 1080623 AAATGATGAAAGAAA GGCTTG GTG CAAACC CTGTTGCTATCCAAG TERM 1042 1080761 - 1080738 - g 91 -11.8 -3.77464 | overlap 1080752 AGATGACTTAGGAAA GGTATCCCAG GAAA CTGAGATACC AGATGAGGTAAAAGA Csac_0957 1080163 - 1082238 + | translation elongation factor G Csac_0958 1082330 - 1083532 + | elongation factor Tu TERM 1043 1083580 - 1083540 - f 85 -4.8 -5.64873 | gap 1, opp_overlap 1083540 TTGAATAATAAAAAA GCCCAAGCCTAAGGTGA AGAAAAAG TCTC-TTAGGTTTGGGC TTTTTTTGACTAAAA TERM 1044 1083540 - 1083580 + F 100 -9.2 -5.47218 | gap 1, opp_overlap 1083540 TTGAATAATAAAAAA GCCCAAGCCTAAGGTGA AGAAAAAG TC-TCTTAGGTTTGGGC TTTTTTTGACTAAAA TERM 1045 1083991 - 1084001 + G 73 -5.4 -4.62069 | opp_overlap 1083991 CTAAAAACTGAGGAA GCTA GCA TAGC TTTTTGGGGTAGCCA TERM 1046 1084198 - 1084187 - g 71 -4.4 -4.83169 | ATGTGTGGACAAAAA GTTC ATCT GAAC TTGACAGGCACCTTT TERM 1047 1084427 - 1084407 - g 74 -2.6 -5.36441 | TGCTCAGATAAAAAA CTTAGAAG AGCTG CTTTTAAG AAAAGTGATAGATAG TERM 1048 1084729 - 1084719 - g 71 -4.6 -4.76193 | opp_overlap 1084719 AAGCAGAATAGAAAA CCAG GTG CCGG TGGTGTCAATAATTG Csac_0959 1083646 - 1085205 + | small GTP-binding protein TERM 1049 1085336 - 1085350 + G 76 -4.2 -5.18726 | CAGGTGGGGTTGTAT TCTACC AAG GGAAGA TTTTTATTATGAAGA Csac_0960 1085302 - 1085724 + | NUDIX hydrolase TERM 1050 1085764 - 1085794 + F 93 -9.9 -4.45151 | gap 1 AGAAATTCAGGGTAA GGGCTGTC-CTTTT TATA AAAAGTGACAGTCC TTTTGCTTCAATGTT Csac_0961 1085891 - 1086511 + | hypothetical protein Csac_0962 1086498 - 1087163 + | hypothetical protein Csac_0963 1088507 - 1087134 - | virulence factor MVIN family protein TERM 1051 1088341 - 1088330 - G 76 -4.4 -5.14698 | AAAGTGAAAACAAAA TTGC AATT GCAA TGCTCCACAAAAATA Csac_0964 1088756 - 1089484 + | hypothetical protein Csac_0965 1089558 - 1090130 + | hypothetical protein Csac_0966 1090218 - 1090613 + | hypothetical protein TERM 1052 1090650 - 1090675 + T 80 -9.7 -3.4409 | opp_overlap 1090644 TTTTTAAGATTTCAG GGGCTGCAAAG TTAA TTATGCAGCCC TTCATGCTTTTTATT Csac_0967 1091435 - 1090686 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Csac_0968 1091704 - 1092114 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1053 1092355 - 1092373 + GF 72 -8.9 -2.78463 | TGTTGCGACGTTTAT CTCACCT CACAC AGGTGAG TATGGTGAGAGCCAT TERM 1054 1093174 - 1093141 - gf 71 -8.3 -3.3636 | opp_overlap 1093140 1093170 GCAGATTATAGAAGA GGTTGAACTTGCA GGGCTTGA TGCAATTTCAACC GGTGTTGTTTTGGCA Csac_0969 1092116 - 1093876 + | aldehyde ferredoxin oxidoreductase TERM 1055 1093970 - 1093988 + GF 70 -5.3 -4.51812 | TCAGAAGCTTAATAT TCCAGCT GACAA AGTTGGA TTTGTTATTGTAAAC Csac_0970 1093851 - 1094081 + | hypothetical protein Csac_0971 1094088 - 1094768 + | UBA/THIF-type NAD/FAD binding protein TERM 1056 1094814 - 1094799 - f 80 -6.1 -4.74504 | opp_overlap 1094799 ATTGCAACCTAAAAA GAGGG GTTTTT CCCTC TTCATGGTGCTTTGG TERM 1057 1094891 - 1094930 + F 77 -2.9 -5.63517 | gap 1 AAGGAAAGATTTAAA GGATACTCTTTCCGAGTT TGTTC AAAGCGGGG-GAGTATCC TTTTTTGTTTCAAAA Csac_0972 1094980 - 1095795 + | ABC-type tungstate transport system permease component-like protein Csac_0973 1095815 - 1096447 + | binding-protein-dependent transport systems inner membrane component Csac_0974 1096440 - 1097015 + | ABC transporter related TERM 1058 1097106 - 1097129 + G 73 -9.6 -2.91276 | opp_overlap 1097104 1097099, overlap 1097105 AAAACTGAGACCATC CCCATCCAAG AGGC CTTGGATAGG ATTTGTGCAAAGGAC Csac_0975 1097022 - 1098236 + | molybdenum cofactor synthesis domain-containing protein Csac_0976 1098233 - 1099396 + | molybdenum cofactor synthesis domain-containing protein Csac_0977 1099413 - 1100339 + | radical SAM domain-containing protein Csac_0978 1100345 - 1101268 + | molybdenum cofactor biosynthesis protein C Csac_0979 1101764 - 1101270 - | molybdenum cofactor synthesis domain-containing protein Csac_0980 1101880 - 1102263 + | GCN5-related N-acetyltransferase TERM 1059 1102590 - 1102575 - g 88 -7.6 -4.7416 | TCAAAAGGGCAAAAA GACCAA GAAT TTGGTC AGCTGCCTGTTCAAC Csac_0981 1102289 - 1103071 + | protein-glutamate O-methyltransferase Csac_0982 1103068 - 1103574 + | hypothetical protein Csac_0983 1103574 - 1104554 + | glycosyl transferase family protein Csac_0984 1104648 - 1105637 + | hypothetical protein TERM 1060 1105774 - 1105764 - gf 73 -5.4 -4.66938 | ATGGGCAACACAAAA GTGA TTA TCAC AGCAACCATTGACGA TERM 1061 1106100 - 1106085 - gf 76 -4.8 -5.0133 | GATGCGTGTAAAAAA CTTTAT GATG ATAAAG TGATAGAAAATTTTC Csac_0985 1105656 - 1106432 + | ribonuclease PH TERM 1062 1106747 - 1106767 + GF 71 -7.6 -3.38832 | opp_overlap 1106747 CAGAAGAAAAAAGAG GCGCACAA TTTGT TTGTGTGC TTACATTTATTGATG Csac_0986 1106401 - 1107015 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 1063 1107272 - 1107239 - g 73 -9.7 -2.55813 | opp_overlap 1107239, overlap 1107238 1107236 1107234 ATTTTAATAACACAT GGTCATATGTATTCT GTAA AGTCTACATATGACC TTATTGTTAACCATG TERM 1064 1107239 - 1107272 + G 85 -9.7 -3.95324 | opp_overlap 1107239 1107238 1107236 1107234 ATTTTAATAACACAT GGTCATATGTATTCT GTAA AGTCTACATATGACC TTATTGTTAACCATG Csac_0987 1106993 - 1107469 + | phosphodiesterase Csac_0988 1107474 - 1108022 + | GCN5-related N-acetyltransferase TERM 1065 1108547 - 1108567 + G 70 -3.3 -5.02476 | GGATTCGCTTTTGTT TATGCCAGA CCT TTTTGCATA TTTTTTGACAGGTAT Csac_0989 1108077 - 1109498 + | carbohydrate kinase, FGGY TERM 1066 1109578 - 1109588 + G 75 -5.4 -4.8048 | TGTGCTTGTTCCAGA GCTT GCA AAGC TTTTTAATGTCACAG TERM 1067 1109834 - 1109816 - g 72 -9.6 -2.7044 | opp_overlap 1109816, overlap 1109813 GATTCAAGCACATCA GCTCTGCA GGT TGCAAAGC TTCTCAAGACCAAGA Csac_0990 1109507 - 1110268 + | DeoR family transcriptional regulator TERM 1068 1110305 - 1110276 - T 70 -6.4 -4.20136 | opp_overlap 1110276 ACTGTTAAAAGTAAA GGGGCTGCCC GGGAATTTTG AAGCAGCCCC TTATGTATTATTACT Csac_0991 1111563 - 1110334 - | aspartate kinase Csac_0992 1112583 - 1111657 - | homoserine kinase Csac_0993 1113879 - 1112623 - | homoserine dehydrogenase TERM 1069 1113140 - 1113153 + g 75 -5.3 -4.77165 | CTATCTAACTTTTTA CTCAT GGCA ATGAG TTTTATTGTACACCC Csac_0994 1114041 - 1113907 - | hypothetical protein Csac_0995 1114359 - 1114051 - | hypothetical protein TERM 1070 1116199 - 1116211 + G 73 -9.1 -3.36515 | overlap 1116197 CCAACGAGATATCTT TGGGC AAG GCCCA TATTTGCAAGTACAC Csac_0996 1114699 - 1116291 + | GerA spore germination protein Csac_0997 1116288 - 1117388 + | spore germination protein Csac_0998 1117385 - 1118680 + | spore germination B3 GerAC family protein Csac_0999 1118758 - 1119450 + | hypothetical protein TERM 1071 1119493 - 1119462 - f 100 -13.3 -5.28315 | opp_overlap 1119462 ATAAAATGTAAAAAA GCTCTTTTATTTC CCTTGT GAAATAAAAGAGC TTTTTATTTTTTTGA TERM 1072 1119462 - 1119493 + F 100 -13.3 -5.86609 | opp_overlap 1119462 ATAAAATGTAAAAAA GCTCTTTTATTTC CCTTGT GAAATAAAAGAGC TTTTTATTTTTTTGA TERM 1073 1119848 - 1119838 - g 88 -5.4 -5.60993 | CTGGTCAGAAAAAAA GGAA AAC TTCC ATACAAAACTGTATC Csac_1000 1119598 - 1120125 + | adenine phosphoribosyltransferase TERM 1074 1121349 - 1121333 - g 73 -6.5 -4.32857 | opp_overlap 1121333 1121331 GTCTTTAAAGATAAA CCTCTTC TCT GATGAGG TATTTGTGTTTACAC TERM 1075 1121854 - 1121837 - g 79 -3.5 -5.48787 | gap 1, overlap 1121826 AGAAGAGATAAAAAA GTATC-TC AAA GATGATAC AGATAAGGAAATTTT Csac_1001 1120185 - 1122353 + | (p)ppGpp synthetase I, SpoT/RelA Csac_1002 1122360 - 1122809 + | D-tyrosyl-tRNA(Tyr) deacylase TERM 1076 1123015 - 1123029 + G 78 -8.6 -3.68378 | opp_overlap 1123015, overlap 1123013 CATACTTCTTACACA TGGTCA TTT TGACCA TATTTTGGGCTGTCA TERM 1077 1123404 - 1123369 - g 73 -2.1 -5.26316 | gap 1, overlap 1123373 1123375 TGAGTCTATAAAAAA TAAACTTTTG-ACTTT GTCAA AGAGCACAAAAGTTTA TCCAGGTCATGGAAT TERM 1078 1123392 - 1123373 - g 76 -4.4 -5.13354 | gap 1, overlap 1123369 1123375 TCTATAAAAAATAAA CT-TTTGAC TTT GTCAAAGAG CACAAAAGTTTATCC Csac_1003 1122857 - 1123456 + | beta-lactamase domain-containing protein TERM 1079 1123467 - 1123506 + F 75 -4.7 -5.06052 | gap 1, opp_overlap 1123475, overlap 1123475 TTTGAGGTAAATAGG TAAAGAAACTTATAGC AATAAGCAA GCTATAAGTTT-TTTA TTTTATGTTTTTTAG TERM 1080 1123475 - 1123499 + F 87 -4.4 -5.8901 | opp_overlap 1123475, overlap 1123467 AAATAGGTAAAGAAA CTTATAGC AATAAGCAA GCTATAAG TTTTTTATTTTATGT TERM 1081 1123771 - 1123738 - g 70 -2.5 -5.16237 | gap 1, overlap 1123756 AATTGTAGTAAAAAA CTTTATACTCACAGAC GAT GACCATGAGT-CAAAG AGGATATTTGGCCGA TERM 1082 1124921 - 1124896 - g 78 -10.6 -3.10545 | opp_overlap 1124895, overlap 1124893 CATATTTGAAAATGA CAGGATTGAA AGAATG TTCAATCCTG CTGATATACAGATTT Csac_1004 1123511 - 1124971 + | coproporphyrinogen III oxidase Csac_1005 1124989 - 1125891 + | radical SAM domain-containing protein TERM 1083 1126016 - 1125986 - g 79 -6.9 -4.37886 | opp_overlap 1125984, overlap 1125989 GCACCTTTGATAAAA GAGCTTCAAAGTG ATTCA CACTTTGAGGTTC GGATTTGTGTCACAG Csac_1006 1125920 - 1127110 + | UDP-N-acetylglucosamine 2-epimerase TERM 1084 1128272 - 1128297 + G 84 -9.8 -3.75461 | GTTGAGGCAGTCTTT GCAGATGGAA CAAGAA TTCCGTCTGC TTTGATAAAGGTTTC TERM 1085 1128953 - 1128934 - g 73 -6.5 -4.2558 | TATTTGGGATGAAAA CAAAGTG GTTGTA CACTTTG AGCTTTCAAGTGATG Csac_1007 1127162 - 1130977 + | fibronectin, type III domain-containing protein TERM 1086 1132621 - 1132602 - g 72 -9.4 -2.6891 | GAGTATATCATATGA GGTAAACT TTGC AGTTTACC AAGATGGTATGGACC Csac_1008 1130995 - 1134618 + | fibronectin, type III domain-containing protein TERM 1087 1135064 - 1135052 - g 100 -9.1 -5.03314 | TTCAGGCCCAAAAAA GGCGT AAC ACGCC AAGAGTTTGCAAAGC Csac_1009 1134635 - 1135462 + | S-layer domain-containing protein Csac_1010 1135561 - 1136364 + | extracellular solute-binding protein Csac_1011 1136381 - 1137043 + | polar amino acid ABC transporter, inner membrane subunit Csac_1012 1137030 - 1137812 + | ABC transporter related Csac_1013 1137909 - 1138841 + | hypothetical protein Csac_1014 1138846 - 1141311 + | beta-lactamase domain-containing protein TERM 1088 1142363 - 1142352 - T 74 -5.8 -4.64598 | opp_overlap 1142343, overlap 1142343 1142340 TAAGTAGGTTAAAAA CCTG CGTT CAGG AAATAGCGCCACTGA Csac_1015 1143197 - 1142439 - | hypothetical protein TERM 1089 1143587 - 1143620 + H 89 -10.5 -3.86431 | gap 1, opp_overlap 1143594, overlap 1143590 1143594 CGACACAACGCAAAA CAAA-AAAGCTGAGCA TTG TGCTCAGCTTAATTTG TTGTATTCTATTATT TERM 1090 1143590 - 1143616 + H 85 -8 -4.50257 | opp_overlap 1143594, overlap 1143587 1143594 CACAACGCAAAACAA AAAAGCTGAGCA TTG TGCTCAGCTTAA TTTGTTGTATTCTAT TERM 1091 1143594 - 1143612 + H 100 -13.2 -3.75295 | opp_overlap 1143594, overlap 1143590 1143587 ACGCAAAACAAAAAA GCTGAGCA TTG TGCTCAGC TTAATTTGTTGTATT TERM 1092 1143612 - 1143594 - H 100 -13.2 -5.80951 | opp_overlap 1143594 1143590 1143587 ACGCAAAACAAAAAA GCTGAGCA TTG TGCTCAGC TTAATTTGTTGTATT Csac_1016 1144003 - 1145130 + | hypothetical protein Csac_1017 1145160 - 1145531 + | hypothetical protein TERM 1093 1145623 - 1145605 - g 76 -9.6 -3.46602 | opp_overlap 1145604 TGGCGGAGATTATAA TCCTGACC AGT GGTCAGAA GATGTTTGGGAACAA Csac_1018 1145558 - 1147588 + | Beta-galactosidase TERM 1094 1147618 - 1147653 + F 100 -11.3 -5.21709 | opp_overlap 1147619, overlap 1147619 CAATTTGCTAATTAT ATGGGACTCTTCAAA TTGTTT TTTGAAGGGTCCCAG TTTTTTGATATGACC TERM 1095 1147652 - 1147619 - f 90 -12.6 -2.90571 | opp_overlap 1147619 1147618 AATTTGCTAATTATA TGGGACTCTTCAAA TTGTTT TTTGAAGGGTCCCA GTTTTTTGATATGAC TERM 1096 1147619 - 1147652 + F 100 -14.8 -3.72302 | opp_overlap 1147619, overlap 1147618 AATTTGCTAATTATA TGGGACTCTTCAAA TTGTTT TTTGAAGGGTCCCA GTTTTTTGATATGAC Csac_1019 1147746 - 1148993 + | radical SAM domain-containing protein TERM 1097 1149175 - 1149161 - g 81 -8.6 -4.03995 | CTTTGGATAAAAATA GAAGTC AAG GACTTC GGCAAAAAGTAATAA TERM 1098 1149321 - 1149307 - g 70 -2.8 -5.10077 | AAACACGGCAAAAAA GTTAAG TAT CTTTAC CATGATGATGTTGTC Csac_1020 1148995 - 1149738 + | hypothetical protein TERM 1099 1149733 - 1149776 + T 100 -14.2 -5.00895 | opp_overlap 1149735, overlap 1149735 TATTTGATAGAAAAA AATTAGGTGTATACCTTATT GGGC AGTGAGGTATACACCTAATC TTTTTGTGTACTCCA TERM 1100 1149774 - 1149735 - T 100 -12.4 -5.71712 | opp_overlap 1149733 1149735 TTTGATAGAAAAAAA TTAGGTGTATACCTTATT GGGC AGTGAGGTATACACCTAA TCTTTTTGTGTACTC TERM 1101 1149735 - 1149774 + T 100 -16.8 -4.12748 | opp_overlap 1149735, overlap 1149733 TTTGATAGAAAAAAA TTAGGTGTATACCTTATT GGGC AGTGAGGTATACACCTAA TCTTTTTGTGTACTC Csac_1021 1150920 - 1149850 - | hypothetical protein TERM 1102 1151490 - 1151478 - g 89 -7.7 -5.02777 | AGAGATAAAAAGAAA GGCAA CTG TTGCC AACCTCATGCTTGTT Csac_1022 1151095 - 1152477 + | FAD dependent oxidoreductase TERM 1103 1152496 - 1152516 + F 100 -11.2 -4.88222 | AATGATTGTGGCAGA GGTGGTCA TTTTT TGACCACC TTTTTCAATTTTAAT Csac_1023 1152572 - 1153411 + | phosphotransferase domain-containing protein TERM 1104 1155268 - 1155279 + G 89 -5.8 -5.27335 | opp_overlap 1155268 GGGTTTTCTTATAAA GACC TAAA GGTC TTTTTCTTTCCACCG Csac_1024 1153408 - 1155663 + | DNA internalization-related competence protein ComEC/Rec2 TERM 1105 1155710 - 1155700 - g 78 -5.4 -4.91357 | AAAGAGATAATAAAA GAGT TAA ACTC TCAGCTTCTAAAAAA TERM 1106 1156068 - 1156050 - g 70 -3.2 -4.94058 | TGAAGCGAAAGAAAA TAAATTGT TCA ACAGTTTA AAGTCAATAGCATTT TERM 1107 1156410 - 1156426 + G 89 -10.9 -3.99775 | opp_overlap 1156407 GCTTAAAACAAGTGT GAGCAAG ATT CTTGCTC TTATTCTTCGTCACT Csac_1025 1155673 - 1156677 + | DNA polymerase III, delta subunit TERM 1108 1156730 - 1156701 - T 81 -4.4 -5.32599 | gap 1 TATAAAATATAAAAA GGCTATCCAA-TA GAGAA TAGCTGGACAGCC CTTTTTCTTTATTGA Csac_1026 1157038 - 1156739 - | ribosomal protein S20 TERM 1109 1157158 - 1157136 - R 93 -7 -5.49568 | overlap 1157137 AAGTTAAAACAAAAA GGGTAAGGCT TTT AACCTTACCA CCCATTACAAATTTA TERM 1110 1157157 - 1157137 - R 89 -10.5 -3.87301 | overlap 1157136 AGTTAAAACAAAAAG GGTAAGGCT TTT AACCTTACC ACCCATTACAAATTT Csac_1027 1158132 - 1157188 - | L-lactate dehydrogenase Csac_1028 1158494 - 1159465 + | nickel-transporting ATPase TERM 1111 1159986 - 1160008 + G 70 -3.4 -5.02476 | opp_overlap 1159992 TTAAAACCTGCATTG GAGAAATTGT TTG ACAAATACTC TTTTTTAAGCGGTCT Csac_1029 1159488 - 1160465 + | binding-protein-dependent transport systems inner membrane component Csac_1030 1160503 - 1161519 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1112 1161703 - 1161693 - g 80 -2.4 -5.60993 | TTTTTTATAAAAAAA GGCG AAA CGCT TGGGCTTGTGGGAGA Csac_1031 1161576 - 1162541 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1113 1163291 - 1163278 - g 86 -6.7 -5.08601 | overlap 1163262 1163258 TGAGTTCAAGAAAAA CCCAA AGTA TTGGG ATGCAAAATCAATAA TERM 1114 1163595 - 1163585 - g 78 -6.8 -4.58685 | opp_overlap 1163584 1163585, overlap 1163575 AAACTTGGTCAAAAA CCAG CAA CTGG ATTTGTGCCATATGG Csac_1032 1162598 - 1164202 + | extracellular solute-binding protein TERM 1115 1164262 - 1164226 - f 100 -14.7 -4.48449 | opp_overlap 1164226 GGAGTAAAATATAAA GGGAAGAGCTATTCA ACAGTTG TAAATAGCTCTTCCC TTTTTGATTTATATG TERM 1116 1164226 - 1164262 + F 100 -12.5 -5.07011 | opp_overlap 1164226 GGAGTAAAATATAAA GGGAAGAGCTATTCA ACAGTTG TAAATAGCTCTTCCC TTTTTGATTTATATG Csac_1033 1164319 - 1164909 + | hypothetical protein Csac_1034 1166022 - 1164895 - | amidohydrolase TERM 1117 1165038 - 1165028 - G 88 -5.4 -5.46706 | opp_overlap 1165028 AGCCGAAAATAAAAA GAAG GTA CTTC TTTACAGTAGAACGC Csac_1035 1167417 - 1166026 - | GntR family transcriptional regulator Csac_1036 1167509 - 1168399 + | pyridoxine biosynthesis protein TERM 1118 1168704 - 1168675 - g 78 -3.7 -5.38321 | gap 1, opp_overlap 1168683, overlap 1168676 1168680 AAAGAGTATAAAAAA CCAAGGAAGTGG TGTTTTG CCACTTC-TTGA CATAGTAATTGAAAG Csac_1037 1168403 - 1168969 + | SNO glutamine amidotransferase Csac_1038 1169223 - 1169594 + | holo-acyl-carrier-protein synthase TERM 1119 1171004 - 1171018 + G 81 -8.6 -4.09108 | ATAGTAGTTTAGATG CAGCAA AAC TTGCTG TTTATCTGCATTCAC Csac_1039 1169602 - 1171137 + | carbohydrate kinase, YjeF related protein Csac_1040 1171149 - 1171664 + | hypothetical protein Csac_1041 1171672 - 1172835 + | alanine racemase Csac_1042 1172946 - 1173266 + | hypothetical protein Csac_1043 1173229 - 1173666 + | transcriptional modulator of MazE/toxin, MazF Csac_1044 1173627 - 1174274 + | hypothetical protein TERM 1120 1174552 - 1174578 + G 76 -5.2 -5.01732 | CCTAATTTTGATGGG TCTGGTGATG CTTGATT TGTCACCAGA TTTTTTAAAAAGATT Csac_1045 1174292 - 1174939 + | cytochrome c biogenesis protein, transmembrane region Csac_1046 1174970 - 1175482 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Csac_1047 1175489 - 1175809 + | glycine cleavage H-protein TERM 1121 1176409 - 1176399 - g 86 -5.4 -5.40072 | CTTTGTCCAAAAAAA GGTA AAA TACC TAAGAAAGAAAAAGT Csac_1048 1175857 - 1176801 + | periplasmic binding protein TERM 1122 1176816 - 1176805 - f 71 -3 -5.27335 | CTGTTCAAATAAAAA CAAA GAAA TTTG AAGTGGTGGTATGTA TERM 1123 1176923 - 1176937 + G 70 -2.8 -5.12617 | TTATCCCTCCCCTTC GTGTTT TAA AGGCAC TTTTTTCACTCATTG TERM 1124 1177787 - 1177797 + G 70 -3.2 -4.97402 | overlap 1177794 TAACCTCAATTGTGG GTGC ACC GTAC TTTTTGTACCTTTTA Csac_1049 1176814 - 1177842 + | transport system permease protein Csac_1050 1177847 - 1179073 + | ABC transporter related TERM 1125 1179187 - 1179172 - g 74 -2.6 -5.37043 | gap 1, opp_overlap 1179172 ATTGTAGACAAAAAA GAGGATA TTG TA-CCTC TTTTAGAAAAAATAA Csac_1051 1179073 - 1179714 + | hypothetical protein TERM 1126 1180722 - 1180699 - g 81 -8.9 -4.07877 | TTAGCTTAGAAAGAA CTGCAGCTG ACATGG CAGCTACAG ACGGTGTGAGAATAT Csac_1052 1179978 - 1180934 + | NLP/P60 protein TERM 1127 1180973 - 1180943 - T 79 -8.3 -4.10257 | opp_overlap 1180943, overlap 1180938 AAGGTAAAAAGACAA GGGGGTTTTCC AGCTAAAAA GGAAAGCCCCC TTTTTGAGTGCAACC TERM 1128 1180943 - 1180973 + T 95 -10.5 -4.65895 | opp_overlap 1180943 1180938 AAGGTAAAAAGACAA GGGGGTTTTCC AGCTAAAAA GGAAAGCCCCC TTTTTGAGTGCAACC Csac_1053 1181936 - 1181028 - | hypothetical protein TERM 1129 1182448 - 1182458 + G 70 -3.2 -5.04385 | ATCAAACAGCTGTGA TTGG TGA CCAG TTTTTTACAGATGTG Csac_1054 1182099 - 1182608 + | HAD family phosphatase TERM 1130 1183233 - 1183244 + G 80 -5.8 -5.05601 | TTGAAAACTATGTGG CTGG CATA CCAG TTTTTGTATATGATA TERM 1131 1183391 - 1183401 + G 78 -4 -5.27477 | opp_overlap 1183391 TTTGATATAGTAAAT CTTT CTC AAAG TTTTTTACTTGAAAT Csac_1055 1182605 - 1183444 + | shikimate 5-dehydrogenase Csac_1056 1184247 - 1183780 - | GtrA family protein Csac_1057 1185187 - 1184234 - | ribonuclease III TERM 1132 1186013 - 1186024 + G 73 -5.8 -4.36586 | GAATGTTGGTAGGCG GAGC TTTA GCTC TTATTTTGATTCTGT Csac_1058 1185961 - 1186164 + | hypothetical protein TERM 1133 1188194 - 1188182 - g 71 -4.9 -4.6971 | GAAAGTTGAATAAAA TCAAA GCA TTTGA ATATGAAGAAAATGG Csac_1059 1186204 - 1189404 + | response regulator receiver protein TERM 1134 1190883 - 1190858 - g 77 -2.5 -5.5353 | overlap 1190851 1190847 1190859 CAGAGGAAGAAAAAA TTCTTCTTGCC ATAA AGCAAGATGAG AATGTAAAATTATAC Csac_1060 1189432 - 1191144 + | type II secretion system protein E Csac_1061 1191198 - 1192253 + | twitching motility protein Csac_1062 1192324 - 1193535 + | type II secretion system protein Csac_1063 1193572 - 1193988 + | hypothetical protein Csac_1064 1194024 - 1194461 + | hypothetical protein TERM 1135 1194585 - 1194621 + G 76 -9.5 -3.34233 | opp_overlap 1194585 1194587 1194588, overlap 1194588 TATGCATATACAGAA TACCTCGAGGGGAAT CAATTAT ATTCCCCTCGAGTCA TTGTCCAAATTGTGG TERM 1136 1194621 - 1194585 - g 91 -11.7 -3.64912 | opp_overlap 1194585 1194588, overlap 1194587 1194588 TATGCATATACAGAA TACCTCGAGGGGAAT CAATTAT ATTCCCCTCGAGTCA TTGTCCAAATTGTGG TERM 1137 1194619 - 1194587 - g 89 -12.1 -3.39896 | opp_overlap 1194585 1194588, overlap 1194585 1194588 TGCATATACAGAATA CCTCGAGGGGAAT CAATTAT ATTCCCCTCGAGT CATTGTCCAAATTGT TERM 1138 1194618 - 1194588 - g 100 -15.6 -2.63455 | opp_overlap 1194585 1194588, overlap 1194587 1194585 GCATATACAGAATAC CTCGAGGGGAAT CAATTAT ATTCCCCTCGAG TCATTGTCCAAATTG TERM 1139 1194588 - 1194618 + G 100 -15.6 -2.83747 | opp_overlap 1194588 1194587 1194585, overlap 1194585 GCATATACAGAATAC CTCGAGGGGAAT CAATTAT ATTCCCCTCGAG TCATTGTCCAAATTG Csac_1065 1194515 - 1195291 + | peptidase A24A domain-containing protein Csac_1066 1195299 - 1195589 + | hypothetical protein Csac_1067 1195579 - 1196133 + | hypothetical protein Csac_1068 1196130 - 1196702 + | hypothetical protein TERM 1140 1197365 - 1197401 + G 74 -8.4 -3.68222 | gap 2, opp_overlap 1197373 1197377, overlap 1197374 1197377 TCTACTTCTGTTGTT GCGAACAATGAACTTTGT GCC ACAAAGTT-ATT-TTCGC TTGTTCAGCTTGAAG TERM 1141 1197374 - 1197394 + G 70 -5.5 -4.36127 | opp_overlap 1197373 1197377, overlap 1197365 1197377 GTTGTTGCGAACAAT GAACTTTGT GCC ACAAAGTTA TTTTCGCTTGTTCAG TERM 1142 1197377 - 1197391 + G 75 -7.2 -4.28369 | opp_overlap 1197373 1197377, overlap 1197374 1197365 GTTGCGAACAATGAA CTTTGT GCC ACAAAG TTATTTTCGCTTGTT Csac_1069 1196759 - 1197721 + | Tfp pilus assembly protein ATPase PilM-like protein Csac_1070 1197762 - 1198295 + | fimbrial assembly family protein Csac_1071 1198347 - 1198991 + | hypothetical protein Csac_1072 1199003 - 1199851 + | hypothetical protein Csac_1073 1199859 - 1201787 + | hypothetical protein TERM 1143 1202054 - 1202068 + F 71 -8.6 -2.90194 | AGCCATGGGCCTGTC GGAAGT AAA ACTTCC TATGGTTGCCAGGCT TERM 1144 1202156 - 1202131 - f 73 -7.5 -3.59315 | opp_overlap 1202133, overlap 1202132 TTAATTATTGGCAAA TGGCATCTGGC GACC GCCAGATGCTT TTATTTTTATATCCA TERM 1145 1202155 - 1202132 - f 82 -11 -2.75268 | opp_overlap 1202133, overlap 1202131 TAATTATTGGCAAAT GGCATCTGGC GACC GCCAGATGCT TTTATTTTTATATCC TERM 1146 1202133 - 1202154 + F 100 -14.5 -5.38839 | opp_overlap 1202132 1202131 AATTATTGGCAAATG GCATCTGGC GACC GCCAGATGC TTTTATTTTTATATC Csac_1074 1202295 - 1204244 + | hypothetical protein Csac_1075 1205402 - 1204206 - | hypothetical protein TERM 1147 1205414 - 1205428 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT TERM 1148 1205821 - 1205790 - H 87 -11.7 -2.53125 | opp_overlap 1205791 1205796, overlap 1205788 1205796 AGGGTTGAGAAAAGG TTAAAACGGCGTC TGGCGT GACGCCGTTTTAT TTTTGGAATGAAATT TERM 1149 1205791 - 1205820 + H 100 -15.2 -4.62336 | opp_overlap 1205790 1205788 1205796, overlap 1205796 GGGTTGAGAAAAGGT TAAAACGGCGTC TGGCGT GACGCCGTTTTA TTTTTGGAATGAAAT TERM 1150 1205815 - 1205796 - H 95 -10.7 -4.29656 | opp_overlap 1205791 1205796, overlap 1205790 1205788 GAGAAAAGGTTAAAA CGGCGTC TGGCGT GACGCCG TTTTATTTTTGGAAT TERM 1151 1205796 - 1205815 + H 100 -10.7 -5.27023 | opp_overlap 1205796 1205790 1205788, overlap 1205791 GAGAAAAGGTTAAAA CGGCGTC TGGCGT GACGCCG TTTTATTTTTGGAAT TERM 1152 1205959 - 1206001 + H 100 -12.2 -4.65182 | opp_overlap 1205961 1205964, overlap 1205948 1205961 1205964 TTAATATATTCTATA TATAATATATTGGCTGCCGT GCA AAGGCAGCCAATATATTAAC TTTGTTTAGTTTCTG TERM 1153 1205961 - 1205999 + H 100 -19.2 -2.60863 | opp_overlap 1205961 1205964, overlap 1205959 1205964 AATATATTCTATATA TAATATATTGGCTGCCGT GCA AAGGCAGCCAATATATTA ACTTTGTTTAGTTTC TERM 1154 1205999 - 1205961 - H 100 -19.2 -2.91507 | opp_overlap 1205961 1205959 1205964, overlap 1205964 AATATATTCTATATA TAATATATTGGCTGCCGT GCA AAGGCAGCCAATATATTA ACTTTGTTTAGTTTC TERM 1155 1205996 - 1205964 - H 100 -16.5 -3.59966 | opp_overlap 1205961 1205959 1205964, overlap 1205961 ATATTCTATATATAA TATATTGGCTGCCGT GCA AAGGCAGCCAATATA TTAACTTTGTTTAGT TERM 1156 1205964 - 1205996 + H 100 -16.5 -3.4241 | opp_overlap 1205964 1205961, overlap 1205961 1205959 ATATTCTATATATAA TATATTGGCTGCCGT GCA AAGGCAGCCAATATA TTAACTTTGTTTAGT TERM 1157 1210018 - 1209980 - g 73 -9.6 -2.91334 | opp_overlap 1209982, overlap 1209977 1209982 1209987 TACATTAGAGAAGTA TATGATACCGTCGGCTGA AGA TCAGCCGATGAGGTCATA TGATCCTAACAAGCC TERM 1158 1209982 - 1210016 + G 75 -10 -2.82516 | opp_overlap 1209977 1209982 1209980 1209987 CATTAGAGAAGTATA TGATACCGTCGGCTGA AGA TCAGCCGATGAGGTCA TATGATCCTAACAAG TERM 1159 1210011 - 1209987 - g 77 -10.7 -2.89981 | opp_overlap 1209982, overlap 1209982 1209980 GAGAAGTATATGATA CCGTCGGCTGA AGA TCAGCCGATGA GGTCATATGATCCTA Csac_1076 1206369 - 1211624 + | glycoside hydrolase family protein TERM 1160 1211639 - 1211693 + F 86 -11.5 -2.89668 | opp_overlap 1211643, overlap 1211642 ATGAGTAGGTAAATG GAAATTTAGCGGGGTGGCACATCTA TAAGT TTGGTGTGCTGCCTCGCTAAAATCC TGTATGGAAGTGTTC TERM 1161 1211642 - 1211690 + F 87 -11.8 -2.69468 | opp_overlap 1211643, overlap 1211639 AGTAGGTAAATGGAA ATTTAGCGGGGTGGCACATCTA TAAGT TTGGTGTGCTGCCTCGCTAAAA TCCTGTATGGAAGTG Csac_1077 1211780 - 1215691 + | glycoside hydrolase family protein Csac_1078 1216344 - 1219463 + | cellulose 1,4-beta-cellobiosidase TERM 1162 1221632 - 1221610 - g 70 -8.4 -3.31144 | overlap 1221613 CTGGTATGGGGACAA GAACCAGAGG GAT CCTCAAGTTC AACGCCAACACCAAC Csac_1079 1219708 - 1223091 + | cellulose 1,4-beta-cellobiosidase Csac_1080 1223072 - 1223803 + | glycoside hydrolase family protein TERM 1163 1223856 - 1223884 + F 77 -8.8 -3.76186 | opp_overlap 1223856, overlap 1223852 TTACTTTTGAACTCA CAGGGTGGGTTT TCTGT ACGCCCGCCCTG TTAATTTTATGAATA Csac_1081 1224059 - 1225756 + | glycosyl transferase family protein Csac_1082 1225796 - 1227253 + | hypothetical protein TERM 1164 1227371 - 1227394 + G 78 -9.8 -3.45405 | overlap 1227368 1227389 AACTTTTAAAGTTGC CTATTATAAG AAGT CTTATAATAG TATTAATTTTATCAC Csac_1083 1227295 - 1228821 + | hypothetical protein Csac_1084 1228887 - 1229909 + | PpiC-type peptidyl-prolyl cis-trans isomerase Csac_1085 1230183 - 1232978 + | type 3a cellulose-binding domain-containing protein Csac_1086 1234160 - 1232931 - | transposase, mutator type TERM 1165 1233024 - 1233039 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 1166 1233561 - 1233575 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA TERM 1167 1234518 - 1234467 - H 71 -8.3 -3.36515 | gap 3, opp_overlap 1234489, overlap 1234465 1234470 TGTGAGGTTCAAAGA GCACCTGTGTTGCCCGACAGAATGGA ATA TCCATCCTGTCGGG-AAGACA-GC-C TAAAATAAAGAGCTG TERM 1168 1234517 - 1234470 - H 100 -15.8 -2.84801 | gap 1, opp_overlap 1234489, overlap 1234467 1234465 GAGGTTCAAAGAGCA CCTGTGTTGCCCGACAGAATGGA ATA TCCATCCTGTCGGG-AAGACAGC CTAAAATAAAGAGCT TERM 1169 1234565 - 1234541 - H 77 -8.5 -3.63341 | AAGAGCTGTCAAGAA TCCTCGTCCTT ATC AAGGGCGGGGA GAAGTCAAAAAATTG TERM 1170 1234676 - 1234666 - g 75 -5.4 -4.82901 | TTGGGCTCATAAAAA TTGC AGG GCAA GACGATAGCATAGTA TERM 1171 1234738 - 1234725 - g 74 -4.5 -4.96106 | opp_overlap 1234725 CACAAAGATGAAAAA GAGCT AATT AGCCC TGTTGTAAAGGAAGC Csac_1088 1234578 - 1235099 + | methylated-DNA--protein-cysteine methyltransferase TERM 1172 1235079 - 1235118 + T 80 -7.3 -4.73432 | gap 1, opp_overlap 1235081, overlap 1235080 1235081 GGATGGAAAATAGAA AACGGGCTTTT-GAGAAA ATGAA TTTCTCCAAAAGCCCGCC TTTATTTATATTTAC TERM 1173 1235080 - 1235117 + T 87 -10.8 -3.42432 | gap 1, opp_overlap 1235081, overlap 1235079 1235081 GATGGAAAATAGAAA ACGGGCTTTT-GAGAAA ATGAA TTTCTCCAAAAGCCCGC CTTTATTTATATTTA TERM 1174 1235081 - 1235116 + T 100 -14.3 -2.63833 | gap 1, opp_overlap 1235081, overlap 1235080 1235079 ATGGAAAATAGAAAA CGGGCTTTT-GAGAAA ATGAA TTTCTCCAAAAGCCCG CCTTTATTTATATTT TERM 1175 1235116 - 1235081 - T 100 -14.3 -4.90471 | gap 1, opp_overlap 1235081 1235080 1235079 ATGGAAAATAGAAAA CGGGCTTTT-GAGAAA ATGAA TTTCTCCAAAAGCCCG CCTTTATTTATATTT Csac_1089 1236491 - 1235130 - | Beta-glucosidase TERM 1176 1236701 - 1236667 - R 95 -4.2 -6.11392 | opp_overlap 1236659 AAAGAAACAAAAAAA GAGACACACCACTTTT AAA ATACAAGGTGTGCCTC TTTTTGTGTAGTTTT Csac_1090 1239108 - 1236736 - | glycosyltransferase 36 Csac_1091 1241568 - 1239133 - | glycosyltransferase 36 TERM 1177 1240480 - 1240466 - G 90 -8.6 -4.63486 | ATCTGGTGAACAAAA CCAAGA ATA TCTTGG TTAGAATCTCTGAAC TERM 1178 1241479 - 1241465 - G 71 -7.2 -3.83026 | overlap 1241469 TGGTTTGAGATTAAA GAAAGA AAG TCTTTC ATGCCGAGATAGTTG Csac_1092 1241808 - 1243052 + | glycosyl transferase, group 1 Csac_1093 1243049 - 1244395 + | sugar transferase TERM 1179 1244493 - 1244473 - T 74 -7.6 -3.85857 | AATCAGCATAAAACA GCACTACC AATTG GGTAATGC ACTGCCGACTGCTAT Csac_1094 1244702 - 1244505 - | hypothetical protein TERM 1180 1244940 - 1244897 - R 75 -9.6 -2.79327 | overlap 1244896 TCAGTGTACTTAAAT TCTCGGGAAGAAAACGCCCA CTGA CAGGCTTTTTCTTCCCCAGC CTGAGATTTGACCCA smpB 1245660 - 1245184 - | SsrA-binding protein TERM 1181 1245301 - 1245320 + g 74 -9.4 -3.09803 | AAGCTCTACTTTTAT TTTACCTC TTTT GAGGTAAA TCTTCAATGGGATTA Csac_1096 1246049 - 1247191 + | aldo/keto reductase TERM 1182 1247441 - 1247423 - g 87 -2.4 -6.07374 | AGAAAAAAGAAAAAA TGCCAG ACCAGAA CTAGCA AATAAACTCGATGAT Csac_1097 1247205 - 1247729 + | hypothetical protein Csac_1098 1247754 - 1248167 + | cupin 2 domain-containing protein TERM 1183 1248223 - 1248245 + F 100 -11.4 -6.17669 | AAAAATTATTCAGTT TAGGCTCTTT TTA AAGGAGCCTA TTTTTTTGTTTTGTT TERM 1184 1249196 - 1249206 + G 72 -4 -4.90381 | GTAAAATTGTTGTTA TAAG TAC CTTA TTTTCTTCTATTGGA TERM 1185 1249711 - 1249722 + G 81 -4.4 -5.28942 | opp_overlap 1249711, overlap 1249705 TCTATTGCTGCAAAA GGAA CATC TTCC TTTTTCTTTGGAATA Csac_1100 1248976 - 1250151 + | major facilitator transporter TERM 1186 1250808 - 1250794 - g 85 -7.2 -5.06103 | ATAACTGTGAAAAAA TCTCTT TGG AAGAGA AAAAGGAATGCCAGA Csac_1101 1250256 - 1251260 + | helix-turn-helix domain-containing protein TERM 1187 1251841 - 1251814 - g 74 -10 -2.75267 | overlap 1251802 1251811 AAATTTCGAATATTA TTCGGAAGAC CCGCTCCT GTCTTCCGAA TTAGCAGCTTCATTT TERM 1188 1252173 - 1252163 - g 70 -5.4 -4.40237 | GATGATAGAGTAAAA GCTT TAG AAGC AGGACTTGATCTGCA TERM 1189 1253553 - 1253568 + G 76 -3.4 -5.29445 | opp_overlap 1253553 AAATTGTTGAAATGA TTAAAA AGAG TTTTAA TTTTTCTTCTTCAAA Csac_1102 1251455 - 1253707 + | glycoside hydrolase family 3 protein TERM 1190 1253729 - 1253746 + F 100 -8.4 -5.63517 | overlap 1253724 TAAAAAGTTTGCTGG GGCTGC TATTAT GCAGCC TTTTTTGTTTAGAAA Csac_1103 1253854 - 1255668 + | histidine kinase internal region TERM 1191 1256378 - 1256363 - g 88 -4.8 -5.47821 | AGTTATTTAAAAAAA TTTTTG AGAG CAAAAA AGACGGAGGACTTTA TERM 1192 1257345 - 1257357 + G 76 -6.3 -4.60487 | overlap 1257328 GATAGATGGTTGTAA TAGCT ATC AGCTA TTTTTCCGAATAATA Csac_1104 1255669 - 1257642 + | response regulator receiver protein TERM 1193 1257831 - 1257817 - gT 86 -4.2 -5.60993 | CTTGGGACAAAAAAA CCAAGA TTT TCGTGG ATAATAAATTCTGAT TERM 1194 1258420 - 1258407 - gT 74 -3.9 -5.13741 | GGAAGGCAAGAAAAA TATCT ACGG AGATA GATTGGCTTTTTTGG Csac_1106 1260272 - 1259163 - | hypothetical protein Csac_1105 1257748 - 1259232 + | alpha-L-rhamnosidase N-terminal domain-containing protein TERM 1195 1260284 - 1260298 + FH 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT Csac_1107 1260467 - 1261708 + | alpha-L-rhamnosidase TERM 1196 1261719 - 1261741 + F 76 -6.2 -4.71482 | opp_overlap 1261719 1261720 1261723, overlap 1261721 TATGAGGAATGTAAA TGGAGCGGTT TTG AGCCGCCCTA TTTTTAAAATTTACT TERM 1197 1261721 - 1261739 + F 71 -6.6 -3.9654 | opp_overlap 1261720 1261719 1261723, overlap 1261719 TGAGGAATGTAAATG GAGCGGTT TTG AGCCGCCC TATTTTTAAAATTTA Csac_1108 1261793 - 1262563 + | DeoR family transcriptional regulator TERM 1198 1263012 - 1262998 - f 78 -5.8 -4.86613 | TAAAACTAAAAGAAA TAAAAC TAT GTTTTA AATACAAAATTCTGT TERM 1199 1263623 - 1263609 - f 77 -4.2 -5.38398 | AGAAAAATAGAAAAA CTACCA GGA TGGGAG GACAGCCTACTATGA Csac_1110 1263635 - 1264735 + | hypothetical protein Csac_1112 1267127 - 1266180 - | transposase, IS4 family protein Csac_1113 1268402 - 1267248 - | hypothetical protein Csac_1114 1268874 - 1268335 - | hypothetical protein TERM 1200 1268597 - 1268582 - GR 71 -7.6 -3.56643 | GTGATATTTTCTAAA CTGCAT GAAC ATGCAG CAGTTATAATTATGT TERM 1201 1268710 - 1268722 + gr 80 -6.3 -4.92757 | GCCATCTTCTACTTT TGCAA ATA TTGCA TTTTCTTCTTGGTCA TERM 1202 1269029 - 1269000 - R 87 -4.3 -5.80951 | ATCCAAAACAAAAAA CCTCATCCCTTAA ATTT TCAAGGAAAGAAG CTTAAAGACTAGATT Csac_1115 1270065 - 1269043 - | aldo/keto reductase TERM 1203 1269145 - 1269156 + g 71 -4.4 -4.81551 | AACTCCACATTTAAT GCAA TTTT TTGC TTTTTGATATGCATC Csac_1116 1271830 - 1270070 - | ABC transporter related TERM 1204 1271293 - 1271271 - G 70 -6.4 -4.08216 | overlap 1271281 TGAGCTTCTCTAAAA TTTGGCAAAA TCT TTTTGGCAAA GACTGTACCGCTTAA Csac_1117 1272606 - 1271854 - | CRISPR-associated Cas family protein TERM 1205 1272033 - 1272053 + g 74 -4.1 -5.14965 | CTTCAACCTTCAGTG GTTTTAAAT CAA ATCTAAAAC TTTTTTCGTCAAAGT TERM 1206 1272886 - 1272900 + G 74 -5 -4.84017 | opp_overlap 1272886 AGCTACATAATAAAG CTTTTC AAA GGAAAG TTTTTGTCCCACGTT Csac_1118 1272814 - 1275003 + | glycoside hydrolase, clan GH-D Csac_1119 1275052 - 1275870 + | GCN5-related N-acetyltransferase TERM 1207 1275892 - 1275919 + F 74 -5.6 -4.83715 | overlap 1275895 TGTTTTAGTCAATCT TAACCACCTG GGAATAGG CAGGTGGTTC TTATTTTTTTAAATT TERM 1208 1275895 - 1275916 + F 79 -7.3 -4.48073 | overlap 1275892 TTTAGTCAATCTTAA CCACCTG GGAATAGG CAGGTGG TTCTTATTTTTTTAA Csac_1120 1275997 - 1276566 + | hypothetical protein TERM 1209 1276732 - 1276745 + F 70 -3.9 -5.00884 | TTTGTTTGTTTTATG TATCA TTGG TGATA TTTTTTCAACAACCT Csac_1121 1276883 - 1277059 + | hypothetical protein TERM 1210 1277319 - 1277305 - g 70 -2.8 -5.20328 | opp_overlap 1277315 CTGCAAAAAAACAAA TAAGGT CTG ACCTTG TCAAGTGGACGGGGA Csac_1122 1277142 - 1277891 + | hypothetical protein TERM 1211 1277903 - 1277937 + T 87 -10 -3.92592 | opp_overlap 1277892 1277903 ATAAGTGGCAAAAAG CCCCTTCCAGTTGACT TAA GGGTAGTTGGAAGGGG TTTAATATTCAAACT Csac_1123 1279150 - 1277939 - | small GTP-binding protein TERM 1212 1278751 - 1278741 - G 72 -4 -5.00616 | opp_overlap 1278741 CTTGTTTGCAAAAAA GAAA GTT TTTC TTTATAATTTGGGTC aspA 1280564 - 1279179 - | aspartate ammonia-lyase Csac_1125 1281111 - 1282085 + | radical SAM domain-containing protein Csac_1126 1282107 - 1282916 + | radical SAM domain-containing protein Csac_1127 1282955 - 1283980 + | hypothetical protein Csac_1128 1283989 - 1284975 + | ABC transporter related Csac_1129 1284977 - 1285825 + | hypothetical protein Csac_1130 1285833 - 1286618 + | hypothetical protein TERM 1213 1287047 - 1287058 + G 74 -4.4 -5.04249 | AGACAGAAAGTATCA CTAC CATG GTAG TTTATTTTTTACACA Csac_1131 1286778 - 1288004 + | hypothetical protein Csac_1133 1290097 - 1288811 - | transposase IS116/IS110/IS902 family protein Csac_1134 1290562 - 1290969 + | hypothetical protein Csac_1136 1291216 - 1292202 + | hypothetical protein Csac_1137 1292792 - 1292298 - | rubrerythrin Csac_1138 1293469 - 1292969 - | GCN5-related N-acetyltransferase TERM 1214 1293627 - 1293612 - H 71 -5.4 -4.60886 | ATACAATTAAATAAA CTTCGG AAAG CCAAAG AACTTTTCAGCAAAG TERM 1215 1294490 - 1294504 + G 86 -4.2 -5.64274 | overlap 1294491 TGGAATAAAATTTCA CCCTGA TTA TCAGGA TTTTTTTGTGGATGA TERM 1216 1294491 - 1294503 + G 74 -7.7 -3.9748 | overlap 1294490 GGAATAAAATTTCAC CCTGA TTA TCAGG ATTTTTTTGTGGATG Csac_1139 1294158 - 1294973 + | amidohydrolase 2 TERM 1217 1295229 - 1295244 + G 73 -9 -3.41554 | overlap 1295224 AGCCATGCCCATTAT GACCAC ATAG GTGGTC TTAAATTTCTTATTG Csac_1140 1294980 - 1295819 + | beta-lactamase domain-containing protein TERM 1218 1296449 - 1296437 - g 91 -6.3 -5.61596 | opp_overlap 1296423, overlap 1296423 AGCTTTAGAAAAAAA GCTTT AGG AAAGC CATATCCAGAAGATG Csac_1141 1295846 - 1296652 + | short-chain dehydrogenase/reductase SDR TERM 1219 1297261 - 1297278 + G 75 -7 -4.30809 | TTTATATAGCTTCGA CAGGAC GGCATG GTCCTG TTTTAATAGATGTTC Csac_1142 1296810 - 1298420 + | acetolactate synthase, large subunit, biosynthetic type Csac_1143 1298465 - 1298983 + | acetolactate synthase, small subunit Csac_1144 1298986 - 1299987 + | ketol-acid reductoisomerase TERM 1220 1301248 - 1301212 - g 88 -11.1 -3.70068 | GATTATAAGTGGAAA TGATTTAATCTCAACAG CAT CTGTCAAGATAAAATCA GGTGAAGAAGAGTAT Csac_1145 1300004 - 1301527 + | 2-isopropylmalate synthase TERM 1221 1301805 - 1301832 + F 100 -9.9 -5.27779 | opp_overlap 1301805 GATTGAATTTTAAAA GCCCAGCCT AAAAAATCAC AGGCTGGGC TTTTTTGATATTAAA TERM 1222 1301832 - 1301805 - f 95 -10.6 -4.19953 | opp_overlap 1301805 GATTGAATTTTAAAA GCCCAGCCTA AAAAATCA CAGGCTGGGC TTTTTTGATATTAAA Csac_1146 1301864 - 1303444 + | alpha-isopropylmalate/homocitrate synthase family transferase TERM 1223 1303483 - 1303446 - f 74 -6.3 -4.42464 | opp_overlap 1303453, overlap 1303450 1303451 1303452 AAGTGGGGAAATAAA TAAAGTGGGGCTGTCAA ATTT TTGACAGCCCTTATCTA CATTTTGTATCAGAT TERM 1224 1303479 - 1303450 - f 72 -4.9 -4.78326 | opp_overlap 1303453, overlap 1303446 1303451 1303452 GGGGAAATAAATAAA GTGGGGCTGTCAA ATTT TTGACAGCCCTTA TCTACATTTTGTATC TERM 1225 1303478 - 1303451 - f 73 -8.4 -3.45911 | opp_overlap 1303453, overlap 1303450 1303446 1303452 GGGAAATAAATAAAG TGGGGCTGTCAA ATTT TTGACAGCCCTT ATCTACATTTTGTAT TERM 1226 1303477 - 1303452 - f 87 -11.9 -2.66462 | opp_overlap 1303453, overlap 1303451 1303450 1303446 GGAAATAAATAAAGT GGGGCTGTCAA ATTT TTGACAGCCCT TATCTACATTTTGTA TERM 1227 1303453 - 1303476 + F 100 -15.4 -3.60587 | opp_overlap 1303452 1303451 1303450 1303446 GAAATAAATAAAGTG GGGCTGTCAA ATTT TTGACAGCCC TTATCTACATTTTGT TERM 1228 1303879 - 1303912 + F 100 -7 -5.54079 | gap 1, opp_overlap 1303889 TAAACTGTCCACCGT TGGTTAAATATAAGG CAATA CCTTA-ATTTAGCCA TTTTTTAATTTTTGG TERM 1229 1304385 - 1304440 + F 75 -8.4 -3.65542 | opp_overlap 1304404, overlap 1304385 1304390 1304404 TTTGCTTTTTTCATG TAGTGCCTGGTCAACTAAACTGTGCA AAAC TGCATAGTTTAGTTGACAAGGTTGAG TGTTTTACACGTGAA TERM 1230 1304390 - 1304435 + F 100 -21.5 -3.28785 | opp_overlap 1304404, overlap 1304385 1304385 1304404 TTTTTTCATGTAGTG CCTGGTCAACTAAACTGTGCA AAAC TGCATAGTTTAGTTGACAAGG TTGAGTGTTTTACAC Csac_1148 1304544 - 1304882 + | hypothetical protein Csac_1149 1304933 - 1305208 + | hypothetical protein Csac_1150 1305906 - 1305295 - | Allergen V5/Tpx-1 family protein TERM 1231 1306969 - 1306986 + H 77 -8.5 -3.73097 | overlap 1306968 GCTATCATACACAGT TTGAAGC TATG GCTTCAA TATTTCTTACCTTGT Csac_1152 1307128 - 1307538 + | CopY family transcriptional regulator TERM 1232 1307723 - 1307699 - T 71 -7.9 -3.54129 | overlap 1307695 GAAGATAAATATTAA TCTCAAGAACC TCT GGTACTTGAAA ATATCCGCCAGATTT TERM 1233 1308762 - 1308795 + T 71 -7.5 -3.38378 | gap 1, opp_overlap 1308751 1308764, overlap 1308761 1308763 CAATTTTTTACAAAA AAGGCTGCAAGAAGAA TTT TTCT-CTTGCAGCCGA ATTTTTAAGCTCTGA TERM 1234 1308763 - 1308794 + T 82 -11 -2.62545 | gap 1, opp_overlap 1308764, overlap 1308762 1308761 AATTTTTTACAAAAA AGGCTGCAAGAAGAA TTT TTCT-CTTGCAGCCG AATTTTTAAGCTCTG TERM 1235 1308793 - 1308764 - T 100 -14.5 -5.24531 | gap 1, opp_overlap 1308763 1308762 1308761 ATTTTTTACAAAAAA GGCTGCAAGAAGAA TTT TTCT-CTTGCAGCC GAATTTTTAAGCTCT Csac_1154 1309966 - 1308824 - | xylose isomerase domain-containing protein Csac_1155 1310814 - 1310017 - | esterase/lipase-like protein Csac_1156 1311217 - 1310918 - | hypothetical protein Csac_1157 1312597 - 1311368 - | transposase, mutator type TERM 1236 1311461 - 1311476 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 1237 1311998 - 1312012 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA Csac_1158 1313363 - 1312632 - | hypothetical protein TERM 1238 1313006 - 1313016 + g 86 -5.4 -5.37345 | overlap 1313014 CTCTTGGCTTTTCAT CAGA CGT TCTG TTTTTTATCATTAAA TERM 1239 1314111 - 1314075 - g 76 -6.7 -4.38171 | opp_overlap 1314089 1314090, overlap 1314078 1314083 CACAGCAGACTAAAA GAAGAAAAGCTGATTTT GCT AAAAGCAACTTTTCGCC TGCAATATGCGAGGG TERM 1240 1314108 - 1314078 - g 86 -9.2 -4.29905 | opp_overlap 1314089 1314090, overlap 1314075 1314083 AGCAGACTAAAAGAA GAAAAGCTGATTTT GCT AAAAGCAACTTTTC GCCTGCAATATGCGA TERM 1241 1314103 - 1314083 - g 73 -3.3 -5.10656 | opp_overlap 1314089 1314090, overlap 1314078 1314075 ACTAAAAGAAGAAAA GCTGATTTT GCT AAAAGCAAC TTTTCGCCTGCAATA Csac_1159 1313547 - 1314479 + | UDP-N-acetylenolpyruvoylglucosamine reductase Csac_1160 1314492 - 1315373 + | hypothetical protein Csac_1161 1315379 - 1316695 + | CofD TERM 1242 1317460 - 1317474 + GF 81 -10 -3.06315 | opp_overlap 1317460 AGAGAAGACCATAAA TGCCTC AAT GAGGCA TATTGAGAATATTGA TERM 1243 1317474 - 1317460 - gf 90 -10 -4.09173 | opp_overlap 1317460 AGAGAAGACCATAAA TGCCTC AAT GAGGCA TATTGAGAATATTGA Csac_1162 1316738 - 1317715 + | hypothetical protein Csac_1163 1317690 - 1317983 + | phosphotransferase system, phosphocarrier protein HPr TERM 1244 1318026 - 1317998 - f 73 -9 -2.83715 | opp_overlap 1317999 GCGAGGATTATTAGA GGCTGCTTAAAA GTATT TTTTAAGCAGCT TTTTTTAAAATCTTG TERM 1245 1317999 - 1318025 + F 100 -13.2 -5.46629 | opp_overlap 1317998 CGAGGATTATTAGAG GCTGCTTAAAAG TAT TTTTTAAGCAGC TTTTTTTAAAATCTT TERM 1246 1318231 - 1318206 - g 72 -8.3 -3.59508 | opp_overlap 1318205 1318208 CATAGCAAAAATACA CAGAGACTACT TTGA AGCAGGCTCTG ATTGCGTTGAAACGA Csac_1164 1318066 - 1319301 + | homocysteine S-methyltransferase TERM 1247 1320613 - 1320625 + G 74 -4.8 -4.88228 | ATTGGCGACTATCCA CAGG CAAAA CCTG TTTTTGATGTTAACT Csac_1165 1319326 - 1321140 + | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein Csac_1166 1321241 - 1321720 + | hypothetical protein TERM 1248 1321752 - 1321730 - f 76 -3.3 -5.36441 | opp_overlap 1321731, overlap 1321731 GTTTGAGATAAAAAA TGCTCAGAC AGATG GTCTGGGCT TTTTTATTTTTTAGT TERM 1249 1321731 - 1321751 + F 100 -9 -6.04324 | opp_overlap 1321730 1321731 TTTGAGATAAAAAAT GCTCAGAC AGATG GTCTGGGC TTTTTTATTTTTTAG TERM 1250 1322555 - 1322567 + G 91 -6.3 -5.61689 | opp_overlap 1322554 TAAAAAATACGATAG TGCAA AGA TTGCA TTTTTTATTGATTTT Csac_1167 1322022 - 1324670 + | hypothetical protein TERM 1251 1325910 - 1325894 - g 75 -7.3 -4.30719 | GGCTTTTACAACAAA GAGAAGT TGT ACCTCTC TGGGGACTGTTGAAT TERM 1252 1326878 - 1326889 + G 78 -5.8 -4.72272 | opp_overlap 1326878 CTTTCAAGTATATAA TGGG CTTG CCCA TTTTTGATGAGGCAA Csac_1168 1324651 - 1327563 + | UvrD/REP helicase TERM 1253 1327685 - 1327673 - f 72 -3.3 -5.1634 | AGAAATATACAAAAA GGAGA AAA TCGCC ATGCTTGTTGATTTT TERM 1254 1327735 - 1327765 + G 75 -5.5 -4.82154 | opp_overlap 1327735 ACTATCCAAAAAAGA TTGCAGCTACT TGTTTTTTT GGTGGCTGCAA TTTTTCGTGTCCATT Csac_1169 1327686 - 1328381 + | anaerobic ribonucleoside-triphosphate reductase activating protein Csac_1170 1328424 - 1329686 + | major facilitator transporter Csac_1171 1329793 - 1330776 + | alanine racemase Csac_1172 1330871 - 1331914 + | oxidoreductase domain-containing protein Csac_1173 1331960 - 1332898 + | xylose isomerase domain-containing protein TERM 1255 1332916 - 1332943 + F 100 -13.6 -5.40464 | overlap 1332910 ACGTATACATTTTGC GGTTGGCAAAGA TTAG TTTTTGCCAACC TTTTTATTTATAATG TERM 1256 1334436 - 1334446 + G 82 -6.8 -4.9725 | TACCTCCTCATCCAG CTGG TGA CCAG TTTTTATATCAAACT Csac_1174 1333058 - 1338562 + | YD repeat-containing protein Csac_1175 1339744 - 1338515 - | transposase, mutator type TERM 1257 1338608 - 1338623 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 1258 1339145 - 1339159 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA Csac_1176 1339764 - 1340099 + | hypothetical protein TERM 1259 1340127 - 1340137 + F 72 -2.6 -5.49729 | overlap 1340126 1340128 AATGTCAAGGGGGGT TTTT AAA AAAA TTTTTTTAGATAATT Csac_1178 1342137 - 1343423 + | transposase IS116/IS110/IS902 family protein Csac_1179 1344718 - 1343489 - | transposase, mutator type TERM 1260 1343582 - 1343597 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 1261 1344119 - 1344133 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA TERM 1262 1345334 - 1345355 + H 71 -7.9 -3.56762 | overlap 1345338 TATATATAAAGGGGG GGTGGCAGC TTAA GCTGCTCCC TTGTCACTTTTTAAT Csac_1181 1345580 - 1346977 + | hypothetical protein Csac_1182 1346993 - 1347841 + | radical SAM domain-containing protein TERM 1263 1347869 - 1347880 + G 70 -3 -5.0916 | GGAATTTGATTTGTT GAAA GACT TTTC TTTTTATATTCAGGA TERM 1264 1348580 - 1348550 - g 95 -11.3 -4.4009 | TGGTATTTCAGAAAA CTCTGATGCAACT GCAAT AGTTGTATCAGAG GAGACAGGAATTATA Csac_1183 1347864 - 1348721 + | hypothetical protein Csac_1184 1348725 - 1349951 + | YbbR family protein Csac_1185 1350015 - 1351796 + | excinuclease ABC, C subunit Csac_1186 1351849 - 1352781 + | HPr kinase Csac_1187 1352978 - 1354042 + | bifunctional phosphoglucose/phosphomannose isomerase TERM 1265 1354197 - 1354236 + G 78 -6.6 -4.55887 | gap 2, overlap 1354198 TAAAAGGCATTTGTA TTACTGACCACGGCCCTG AGATGC CAGGGTCGTG--CAGTAG TTTATATTTTTACAA TERM 1266 1354781 - 1354752 - g 91 -9.4 -4.70169 | opp_overlap 1354752 TCATAGTCAACAAAA GCCTTGAGAACT TTTTGG AGTTCTTAAGGC TTCATGGGAAAAATA TERM 1267 1354752 - 1354781 + G 87 -12.3 -3.14344 | opp_overlap 1354752 TCATAGTCAACAAAA GCCTTGAGAACTT TTTG GAGTTCTTAAGGC TTCATGGGAAAAATA Csac_1188 1354085 - 1354804 + | putative hydrolase Csac_1189 1354832 - 1355803 + | fructose-1,6-bisphosphate aldolase, class II TERM 1268 1355860 - 1355892 + F 72 -3.5 -5.27923 | opp_overlap 1355860 1355866, overlap 1355874 ATTTTTATTTAAAGA CAAAAAGAGGCGA AGGGGAA TGGCCTCTTTTTC TTTTTTGTAAAATTG TERM 1269 1355874 - 1355886 + F 79 -2.6 -5.8096 | opp_overlap 1355866 1355860, overlap 1355860 ACAAAAAGAGGCGAA GGGG AATGG CCTC TTTTTCTTTTTTGTA Csac_1190 1356000 - 1356143 + | hypothetical protein TERM 1270 1356241 - 1356231 - f 74 -4 -5.15634 | opp_overlap 1356231 TATGGGAGGAAAAAA TCTT TTC AAGA TGATTCACGCTTTTA Csac_1191 1356241 - 1357602 + | radical SAM domain-containing protein Csac_1192 1357603 - 1358115 + | carbonic anhydrase TERM 1271 1358825 - 1358815 - g 70 -6.8 -4.0348 | opp_overlap 1358815 AGAGGAGATTACAAA TGGC GAA GCCA TAATTAGGGGTATGA secD 1358237 - 1359484 + | preprotein translocase subunit SecD Csac_1194 1359484 - 1360413 + | protein-export membrane protein SecF TERM 1272 1360439 - 1360494 + F 91 -7.2 -5.3167 | gap 1, opp_overlap 1360452, overlap 1360443 1360452 1360486 ATATAGCTTTTTTGT TAAGTTTT-GAAAAGCTCTTGCGAAAG TCT CTTTCGTAAGGGCTTTTTTAAAATGTC TTTTATTTATTTTTA TERM 1273 1360443 - 1360489 + F 100 -16.2 -2.76618 | opp_overlap 1360452, overlap 1360439 1360452 1360486 AGCTTTTTTGTTAAG TTTTGAAAAGCTCTTGCGAAAG TCT CTTTCGTAAGGGCTTTTTTAAA ATGTCTTTTATTTAT TERM 1274 1360480 - 1360452 - f 91 -10.3 -4.11484 | opp_overlap 1360443 1360439 1360452 GTTAAGTTTTGAAAA GCTCTTGCGAAAG TCT CTTTCGTAAGGGC TTTTTTAAAATGTCT TERM 1275 1360452 - 1360480 + F 100 -14.7 -5.08169 | opp_overlap 1360452, overlap 1360443 1360439 GTTAAGTTTTGAAAA GCTCTTGCGAAAG TCT CTTTCGTAAGGGC TTTTTTAAAATGTCT TERM 1276 1361903 - 1361923 + G 73 -3.4 -5.24416 | gap 1, overlap 1361895 1361904 TACTACGTGACAGAC GT-CATCTT GCTC AAGATGGAC TTTTTATTGTGGTTC Csac_1195 1360528 - 1362195 + | beta-lactamase domain-containing protein Csac_1196 1362257 - 1362487 + | PRC-barrel domain-containing protein Csac_1197 1363239 - 1362544 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Csac_1198 1363479 - 1364738 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1277 1365135 - 1365158 + G 86 -10.4 -3.70722 | gap 1, opp_overlap 1365134 1365141, overlap 1365142 1365157 TCAATTCCACACGAT GCAAAAGACCC GAT GGG-CTTTTGC TTCTATCTTGGTAGA TERM 1278 1365519 - 1365545 + G 75 -9.6 -3.14745 | overlap 1365517 1365515 TTTAGCTTAGATGTA GCACAAAGAT ATCAACC ATCTTTGTGC TCTGTATTATAAAAA Csac_1199 1364760 - 1365557 + | beta-lactamase domain-containing protein Csac_1200 1365594 - 1366046 + | RpiB/LacA/LacB family sugar-phosphate isomerase Csac_1201 1366089 - 1366730 + | uracil phosphoribosyltransferase TERM 1279 1367148 - 1367124 - g 80 -8.6 -3.92641 | AAGGTGATTTACAAA GGCTCATATC CAGAT GAAATGAGCC AAAAGATATTTGAAG Csac_1202 1366755 - 1367210 + | CMP/dCMP deaminase, zinc-binding TERM 1280 1367472 - 1367451 - g 79 -5.1 -5.16841 | gap 1, opp_overlap 1367461 GCATACCAAGAAAAA CAGCTTG-GC ACA GCACATGCTG TTATGTGTGCAATGA TERM 1281 1368294 - 1368281 - g 88 -5.3 -5.63517 | TGTTGAAATAAAAAA TTCCA AGCT TGGAA AGAACACGAAGTCTG Csac_1203 1367217 - 1368608 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 1282 1368645 - 1368629 - f 87 -5.3 -5.66989 | TAAAGATGAAAAAAA TTTAAAA ATA TTTTAAA GATGGATTATTTTTT Csac_1204 1368726 - 1369703 + | ribose-phosphate pyrophosphokinase TERM 1283 1370071 - 1370087 + G 76 -9.5 -3.3323 | opp_overlap 1370070 1370065 GCCTGAAAAGCTAAT TGTCATC TAC GATGACA TTGCATTTGATGTTG Csac_1205 1369808 - 1370377 + | aminoacyl-tRNA hydrolase TERM 1284 1373748 - 1373766 + G 78 -6 -4.76644 | overlap 1373743 ATTGATATTTTCTTT GTCGAAAG ATT CTTTGGAC TTTTTAGTAAATCTT Csac_1206 1370380 - 1373811 + | transcription-repair coupling factor TERM 1285 1374413 - 1374393 - g 81 -4.1 -5.4833 | TGAGCTAACAAAAAA TCAAACA GCCTCTA TGTTTGA GATAGAAAGCTACTA TERM 1286 1374602 - 1374582 - g 73 -5.5 -4.61527 | AAAACTTGCTAAAAA GTATTCTGA GGA TGAGAATAC AAAACAAAAAGGAGG Csac_1207 1373896 - 1374903 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1287 1375404 - 1375375 - g 71 -8.6 -3.28119 | opp_overlap 1375378 1375384 1375385, overlap 1375399 ATCTATTCAGAGGAA GCGGACTTGATG GTCTTG CATCAATCCCGC CTGTGCGCGATATTG TERM 1288 1375384 - 1375431 + G 84 -9.9 -3.66896 | opp_overlap 1375375 1375399, overlap 1375378 1375385 GAGGAAGCGGACTTG ATGGTCTTGCATCAATCCCGC CTGTGC GCGATATTGTTGCAAGACCAC TTATATATATGTCAA TERM 1289 1375385 - 1375430 + G 90 -13.4 -2.79655 | opp_overlap 1375375 1375399, overlap 1375378 1375384 AGGAAGCGGACTTGA TGGTCTTGCATCAATCCCGC CTGTGC GCGATATTGTTGCAAGACCA CTTATATATATGTCA Csac_1208 1374942 - 1376309 + | tRNA(Ile)-lysidine synthetase Csac_1209 1376309 - 1376848 + | hypoxanthine phosphoribosyltransferase TERM 1290 1377232 - 1377217 - g 82 -7.6 -4.39426 | GAGATTGTGACAAAA GAACCT CCTC AGGTTC CATGGTGGCTATCAA TERM 1291 1377244 - 1377265 + G 76 -6 -4.58283 | GTTCCATGGTGGCTA TCAACATT TTTACC AATGTTGA TTTTTGCAGGACTTA Csac_1210 1376899 - 1378746 + | ATP-dependent metalloprotease FtsH TERM 1292 1378848 - 1378887 + F 100 -10.2 -5.72622 | gap 1 TAATAATGAGCGTGA GGACAAAGGCGT-TCTC AGTAGGA GAGGGATGCCTTTGTCC TTTTTTGTTTATAGA Csac_1211 1378938 - 1380275 + | glutamine synthetase, type I TERM 1293 1380289 - 1380320 + F 84 -3.6 -5.74086 | opp_overlap 1380289 1380309 AATTACACACAAAAA CGGGTGGAAACT GGAAGTAA GGATGCCACCCG TTTTTTATTTCCTTT Csac_1212 1380519 - 1380803 + | hypothetical protein Csac_1213 1380852 - 1381622 + | MazG family protein Csac_1214 1381711 - 1381986 + | histone family protein DNA-binding protein Csac_1215 1382099 - 1382341 + | RNA-binding S4 domain-containing protein Csac_1216 1382417 - 1382698 + | YabP family protein Csac_1217 1382679 - 1383029 + | hypothetical protein Csac_1218 1383083 - 1383382 + | septum formation initiator Csac_1219 1383339 - 1383764 + | RNA-binding S1 domain-containing protein TERM 1294 1383789 - 1383766 - f 91 -10.4 -4.13711 | opp_overlap 1383766 GCAAAAGAGGATAAA GCCTGTTTTA AAAT CAAAACAGGC TTTTAATTTAAGAAG TERM 1295 1383766 - 1383789 + F 93 -9.7 -4.54727 | opp_overlap 1383766 GCAAAAGAGGATAAA GCCTGTTTT AAAATC AAAACAGGC TTTTAATTTAAGAAG TERM 1296 1384052 - 1384068 + G 88 -10.9 -3.68302 | opp_overlap 1384048 TGGTTACAGTACTCA GGTTCTC TAT GAGAACC TTGTTAAAATATTAG TERM 1297 1384487 - 1384473 - g 100 -8.6 -5.01042 | AAGTTAAATGAAAAA CTGCTT GAA AAGCAG GAAGCAAGTCAAAAA Csac_1220 1383846 - 1384505 + | redox-sensing transcriptional repressor Rex Csac_1221 1384527 - 1386008 + | threonine synthase TERM 1298 1386054 - 1386044 - f 72 -2.6 -5.38398 | ACAAAAATATAAAAA TTTA AGC TAAA AAGGGTTGAAAAACG TERM 1299 1386284 - 1386320 + F 86 -6 -5.42975 | opp_overlap 1386276, overlap 1386276 TAAAAAGGGTAAAGT GTGCTTTCACCT CGTTTTAAGCTTT GGGTGAAAGCAC TTTTTGTTTGTATGC TERM 1300 1386680 - 1386668 - g 77 -2.7 -5.5208 | overlap 1386661 TCAGAAGACAAAAAA GTTCT GGG AAAAC TCGAGGATCTAATTG Csac_1222 1386599 - 1387849 + | MgtE intracellular region TERM 1301 1388147 - 1388159 + G 80 -6.3 -5.07053 | TAGAGAACACTTTGG TGTCA AGA TGACA TTTTTTGCGATGATT TERM 1302 1388343 - 1388326 - g 80 -2.1 -5.71712 | gap 1, opp_overlap 1388330, overlap 1388330 GTTCATATAAAAAAA CAGAGAAA TTT TTTCT-TG CTCTCATGGTAATAT Csac_1223 1387884 - 1389137 + | natural resistance-associated macrophage protein TERM 1303 1389227 - 1389204 - f 71 -8.9 -2.53876 | gap 1, opp_overlap 1389202 1389201 1389226 TGGGATTCGAACCCA CG-GTACCGC TTTTG GCGGTACGCG CGATTTCGAGTCGCG TERM 1304 1390846 - 1390834 - g 74 -4.9 -4.82678 | GTAGAAAAAGGAAAA TAAAC TTT GTTTA TGAAGATTCAGACCC Csac_1224 1389537 - 1391201 + | formate--tetrahydrofolate ligase Csac_1225 1391220 - 1392512 + | glycine C-acetyltransferase TERM 1305 1392567 - 1392539 - g 82 -10.4 -3.60792 | opp_overlap 1392532 CTTTTAAGTTGCAAA GAGGCTGCAA TTTTAATTG TTGCAGCCTC TAAAAATTTATCACT Csac_1226 1392521 - 1393831 + | alcohol dehydrogenase TERM 1306 1394136 - 1394146 + G 73 -6.8 -4.29738 | TTGGGTTCTCATATG CTGC AGC GCAG TTTTGATAAATATAG Csac_1227 1394008 - 1394682 + | hypothetical protein Csac_1228 1395032 - 1396045 + | alanine racemase Csac_1229 1396071 - 1396829 + | alpha/beta fold family hydrolase-like protein TERM 1307 1397236 - 1397268 + T 100 -7.9 -5.79595 | opp_overlap 1397236 AAAAATAAAGAAAAA GTTCAAGATAAAC CTCTTTT GCTTATCTTGAAC TTTTTTATTTTAAGC TERM 1308 1397268 - 1397236 - T 100 -10.1 -5.63012 | opp_overlap 1397236 AAAAATAAAGAAAAA GTTCAAGATAAAC CTCTTTT GCTTATCTTGAAC TTTTTTATTTTAAGC Csac_1230 1397505 - 1397278 - | ribosomal protein L28 Csac_1231 1398610 - 1397546 - | hypothetical protein TERM 1309 1397956 - 1397975 + g 74 -7.9 -3.90586 | opp_overlap 1397959, overlap 1397959 TGTCAAAGCTCTTTA CAAGCTC ATCAGG GAGCTTG TTTCTAAAATCATAT TERM 1310 1399154 - 1399141 - g 84 -3.1 -5.74122 | opp_overlap 1399145 GATGAGATAAAAAAA TTCGG TTTT CCAAA CTATTTTGATGACCA TERM 1311 1399396 - 1399385 - g 74 -3 -5.28561 | overlap 1399379 AAGATATAATAAAAA CTTT AATG AAAG GAAAAAGCAGACATT Csac_1232 1398694 - 1399911 + | tRNA pseudouridine synthase D, TruD Csac_1233 1399936 - 1400223 + | hypothetical protein TERM 1312 1400425 - 1400439 + F 74 -7.2 -4.0348 | TAATCGCTATTGACT GACAAT CTG ATTGTC TTTATAATATAATCT TERM 1313 1400799 - 1400834 + F 100 -7.6 -5.72616 | opp_overlap 1400799 TGAAGAAGACAGTAA CACCAATCGCAGAGTT TAAA AACTTTGTGAGAGGTG TTTTTTTATGTCCAT Csac_1234 1401246 - 1401863 + | hypothetical protein Csac_1235 1401892 - 1402866 + | hypothetical protein Csac_1236 1403353 - 1403790 + | DNA polymerase beta subunit TERM 1314 1405091 - 1405071 - g 91 -9.8 -4.46615 | opp_overlap 1405069 TAGGAGCAATTAAAA GAAGACTG AGCGA CAGTCTTC GGGTTTCTACTGCGG Csac_1237 1404077 - 1405294 + | transposase, IS605 OrfB Csac_1238 1405527 - 1405721 + | hypothetical protein TERM 1315 1405782 - 1405762 - f 77 -9.1 -3.19936 | opp_overlap 1405776 AATCATTTAAGCTAA TTGTCCGAA TAT TTCGAACAA AAGTTTGGTATTGTA Csac_1239 1406055 - 1407554 + | Mg chelatase, subunit ChlI Csac_1240 1408359 - 1407547 - | ABC-3 protein TERM 1316 1407641 - 1407627 - G 71 -4.2 -4.86293 | overlap 1407628 1407629 CAACAAAAATTAAAA CTGTTG CAC CACCAG GTGGGACATCTACAT TERM 1317 1408220 - 1408206 - G 73 -6.4 -4.31549 | TAAAATTTAAAAGAA GTGCTG CGG CAACAC CAACAATTGCTGTGT Csac_1241 1409154 - 1408393 - | ABC transporter related TERM 1318 1408854 - 1408840 - G 70 -2.8 -5.19261 | AAAGCGATCAAAAAA TCTCTT TTT AGGAGA AAGCCCTAAAAGCAC TERM 1319 1409199 - 1409215 + r 86 -5.9 -5.47218 | ATTTGCTAAGCACCA CTTCAAA TGC TTTGAGG TTTTTTTCCATAAGA Csac_1242 1410042 - 1409182 - | periplasmic solute binding protein Csac_1243 1410464 - 1410039 - | ferric uptake regulator family protein Csac_1244 1410960 - 1410643 - | regulatory protein, ArsR Csac_1245 1411121 - 1412518 + | radical SAM domain-containing protein TERM 1320 1412588 - 1412558 - T 71 -5.5 -4.60292 | opp_overlap 1412558, overlap 1412551 GATAATAACAAGAAA GGGCAAGCT GTGGAATAAAGTT AGCTTGCCC TTTTTGAATTATATT TERM 1321 1412558 - 1412588 + T 80 -6.2 -4.8066 | opp_overlap 1412551 1412558 GATAATAACAAGAAA GGGCAAGCTG TGGAATAAAGT TAGCTTGCCC TTTTTGAATTATATT Csac_1246 1413193 - 1412597 - | hypothetical protein TERM 1322 1412761 - 1412780 + g 74 -5 -4.87665 | ATGACCATATTCCAA GGACAGTT CCGA GATTGTCC TTTTTATACATCAAA TERM 1323 1413609 - 1413599 - g 74 -4 -5.07275 | TGATATAGACAAAAA TCTT CTA AAGA AAATGATGAGTGAGA TERM 1324 1414317 - 1414306 - g 76 -5.8 -4.66264 | opp_overlap 1414306 CAAAATTTTTAAAAA CAGG GCAT CCTG TGATTTTGCCGGGAA TERM 1325 1414534 - 1414517 - g 81 -2.8 -5.61913 | overlap 1414510 1414523 AATAAATACAAAAAA TCTAAA GGACTT TTTAGA TGAAAGTCCGCAAAG Csac_1247 1413297 - 1414652 + | hypothetical protein Csac_1248 1414630 - 1415772 + | DNA protecting protein DprA TERM 1326 1417485 - 1417470 - g 71 -4.7 -4.56597 | CTGCCGCTTGAAAAA GAGCT TGAAAC AGCTC GAAATACCATGCAGC Csac_1249 1415805 - 1417886 + | DNA topoisomerase I Csac_1250 1417894 - 1419201 + | gid protein Csac_1251 1419228 - 1419758 + | ATP-dependent protease peptidase subunit hslU 1419770 - 1421167 + | ATP-dependent protease ATP-binding subunit Csac_1253 1421212 - 1422006 + | transcriptional repressor CodY TERM 1327 1422035 - 1422076 + F 88 -6.7 -5.31545 | gap 1, opp_overlap 1422041, overlap 1422038 1422041 CGTAGATTTCAAGGG GTTAAAGAGGATAGTAGGGT AGA AACCTGCTATCCTCTT-GTC TTTTTTAATCTTGTT TERM 1328 1422038 - 1422074 + F 100 -11.7 -4.26398 | opp_overlap 1422041, overlap 1422035 1422041 AGATTTCAAGGGGTT AAAGAGGATAGTAGGGT AGA AACCTGCTATCCTCTTG TCTTTTTTAATCTTG TERM 1329 1422071 - 1422041 - f 89 -11.2 -3.57561 | opp_overlap 1422038 1422035 1422041 TTTCAAGGGGTTAAA GAGGATAGTAGGGT AGA AACCTGCTATCCTC TTGTCTTTTTTAATC TERM 1330 1422041 - 1422071 + F 100 -13.4 -4.20875 | opp_overlap 1422041, overlap 1422038 1422035 TTTCAAGGGGTTAAA GAGGATAGTAGGGT AGA AACCTGCTATCCTC TTGTCTTTTTTAATC Csac_1254 1422188 - 1422601 + | flagellar basal-body rod protein FlgB Csac_1255 1422611 - 1423051 + | flagellar basal-body rod protein FlgC Csac_1256 1423098 - 1423406 + | flagellar hook-basal body complex subunit FliE Csac_1257 1423440 - 1425128 + | flagellar M-ring protein FliF fliG 1425137 - 1426147 + | flagellar motor switch protein G Csac_1259 1426140 - 1426895 + | H+-transporting two-sector ATPase, E subunit TERM 1331 1426941 - 1426952 + G 73 -5.8 -4.42653 | overlap 1426948 1426949 GAGTACGAATTTTTA CCAG TTTA CTGG TTTTGTAAATCAGGT Csac_1260 1426897 - 1428192 + | flagellar protein export ATPase FliI Csac_1261 1428226 - 1428681 + | flagellar export protein FliJ TERM 1332 1428913 - 1428893 - g 70 -2.5 -5.19879 | GTCCAAACACAAAAA GTGGACTTT GAA AAGGTCTAC AAAGAGCAGATAGCT Csac_1262 1428665 - 1429492 + | hypothetical protein TERM 1333 1429828 - 1429790 - g 73 -3.2 -5.18726 | opp_overlap 1429797 1429797, overlap 1429797 1429798 TGGTGATAAGAAAAA TGAAAATGTTCAAAACCA AGA TGGATTTGAAACTTTGCA AGGTGCTCAAAAAAT TERM 1334 1430280 - 1430269 - g 76 -4.4 -5.19261 | AAATTGATGAAAAAA CAGA TACT TCTG ACCATTTTGTCGTGG Csac_1263 1429539 - 1431092 + | flagellar hook-length control protein Csac_1264 1431106 - 1431615 + | flagellar hook capping protein Csac_1265 1431612 - 1431968 + | flagellar operon protein TERM 1335 1432258 - 1432248 - g 76 -6.8 -4.36914 | GCCTCTGTCATAAAA GCAG CTT CTGC ACCTGATACAACCTC TERM 1336 1433369 - 1433354 - g 78 -9 -3.70571 | opp_overlap 1433358, overlap 1433358 TATAAACACTGTAAA CTCAGG GGAC CCTGAG ATAGGGACGCCTGGT Csac_1266 1432098 - 1433552 + | hypothetical protein Csac_1267 1433676 - 1433903 + | flagellar FlbD family protein Csac_1268 1433900 - 1434373 + | flagellar basal body-associated protein FliL Csac_1269 1434399 - 1435388 + | flagellar motor switch protein FliM Csac_1270 1435385 - 1436518 + | flagellar motor switch protein Csac_1271 1436588 - 1436950 + | response regulator receiver protein Csac_1272 1436996 - 1437388 + | hypothetical protein Csac_1273 1437385 - 1438140 + | flagellar biosynthetic protein FliP Csac_1274 1438164 - 1438433 + | flagellar biosynthetic protein FliQ Csac_1275 1438446 - 1439228 + | flagellar biosynthetic protein FliR TERM 1337 1439327 - 1439358 + G 79 -8.2 -4.0127 | gap 1, opp_overlap 1439332 1439334, overlap 1439334 AAGCGTGGAATGGTA GCAAAGAGCAGAG AAGTTAC CTCTGCT-TTTGC TTTACTTATAAGTGT TERM 1338 1439334 - 1439352 + G 76 -6 -4.62957 | opp_overlap 1439332 1439334, overlap 1439327 GAATGGTAGCAAAGA GCAGAG AAGTTAC CTCTGC TTTTGCTTTACTTAT Csac_1276 1439225 - 1440325 + | flagellar biosynthetic protein FlhB TERM 1339 1441824 - 1441804 - f 85 -8.3 -4.60487 | overlap 1441815 CAGGATGTGCAAAAA CTCATTGAC AAT GTCAAAGAG ACAAACCCGGTGCTT TERM 1340 1442511 - 1442496 - g 72 -4 -5.00616 | opp_overlap 1442480, overlap 1442497 GGCTTTTTTAAAAAA CCACTT ATAG AAGTGA CAGCTGCGTGCGAAG Csac_1278 1442361 - 1443473 + | GTP-binding signal recognition particle TERM 1341 1443526 - 1443511 - g 76 -6.2 -4.58283 | GAATCTTGTCAAAAA GTCAAA TATT TTTGAC AGACAGAGCGAAAAG Csac_1279 1443470 - 1444369 + | cobyrinic acid a,c-diamide synthase Csac_1280 1444385 - 1445074 + | type IV pilus assembly PilZ Csac_1281 1445111 - 1447105 + | CheA signal transduction histidine kinase Csac_1282 1447132 - 1447554 + | putative CheW protein TERM 1342 1448162 - 1448152 - g 81 -5.4 -5.2422 | AATCATATCAAAAAA TGCT AAA AGCA TTGGGAGTAGCGTAG Csac_1283 1447560 - 1448177 + | CheC, inhibitor of MCP methylation Csac_1284 1448181 - 1448663 + | chemoreceptor glutamine deamidase CheD TERM 1343 1449240 - 1449230 - g 73 -5.4 -4.67478 | GAAATAGAAAAAGAA GGTA AAA TACC AACAGATGAAGAAGT Csac_1285 1448882 - 1449619 + | RNA polymerase, sigma 28 subunit, FliA/WhiG Csac_1286 1449651 - 1451039 + | hypothetical protein TERM 1344 1451165 - 1451152 - g 86 -5.3 -5.32396 | overlap 1451161 ACAGCAAAAAGAAAA TATGC TAAA GCATA TAAATGCCCAAAAAA Csac_1287 1451063 - 1451326 + | hypothetical protein Csac_1288 1451340 - 1451873 + | hypothetical protein Csac_1289 1451933 - 1452190 + | hypothetical protein TERM 1345 1452171 - 1452190 + F 70 -8 -3.0879 | opp_overlap 1452174, overlap 1452170 AAGAGATTTTTGAGA CTATTTAC CAAA GTAAATAG ATTTTGGGATAACTT Csac_1290 1452239 - 1453090 + | helix-turn-helix domain-containing protein TERM 1346 1453284 - 1453238 - f 72 -9 -2.7012 | overlap 1453243 GAATATACTATAGTA TTTAATGTGATTAGCACTCACT CTC AATGAGTGCTAACAAAACTAAA AAGGAGGTCGGGAAA Csac_1291 1453302 - 1453589 + | chaperonin Cpn10 TERM 1347 1454490 - 1454471 - g 78 -5.8 -4.84311 | gap 1, opp_overlap 1454470 GGTGACAGAAGAAAA GCAATG-CT TCA AGACATTGC AATTTTAACAGGTGG TERM 1348 1454723 - 1454705 - g 72 -3.9 -5.03994 | TTTGATAGAGAAAAA TTACAAG AAAGA CTTGCAA AACTTGCTGGTGGCG TERM 1349 1455162 - 1455176 + G 71 -8.6 -3.14132 | overlap 1455154 CTGCAATGCTTCTGA CAACAG AGG CTGTTG TTGCTGAAAAACCAG Csac_1292 1453616 - 1455235 + | chaperonin GroEL TERM 1350 1455254 - 1455281 + F 100 -13.6 -6.19443 | opp_overlap 1455254 1455258 AATGAGTTTTTAAAA TAAAGGCTACCG TGAA TGGTAGCCTTTA TTTTTTTTTGATATA TERM 1351 1455281 - 1455254 - f 100 -12.9 -4.10429 | opp_overlap 1455254, overlap 1455258 AATGAGTTTTTAAAA TAAAGGCTACC GTGAAT GGTAGCCTTTA TTTTTTTTTGATATA TERM 1352 1455277 - 1455258 - f 90 -9.3 -4.65263 | opp_overlap 1455254, overlap 1455254 AGTTTTTAAAATAAA GGCTACC GTGAAT GGTAGCC TTTATTTTTTTTTGA TERM 1353 1455455 - 1455465 + G 70 -6.8 -4.15044 | opp_overlap 1455454 AAAACAAAAAGGATT GCAC GTG GTGC TTTGTTCAGGACGAA Csac_1293 1455348 - 1456187 + | Cof-like hydrolase TERM 1354 1456303 - 1456291 - g 71 -4.9 -4.67692 | CCAAAATTAAATAAA GTTTT ACT AAAAC CAAATTTGCTTATGA TERM 1355 1456338 - 1456325 - g 76 -2.3 -5.52384 | opp_overlap 1456326 1456328, overlap 1456326 TGCTTATGAAAAAAA GGCCT GATG AGGCT GTTACAACCCATCCG Csac_1294 1456180 - 1457307 + | hypothetical protein Csac_1295 1457350 - 1457853 + | CheC domain-containing protein Csac_1296 1457883 - 1458347 + | RNA methyltransferase TERM 1356 1458728 - 1458709 - g 74 -3.6 -5.17576 | gap 1, opp_overlap 1458723 TAGGAAGTGAAAAAA TCTACC-CC ATT GATGGTAGA ACTGCCTCAATTGGC TERM 1357 1458898 - 1458882 - g 86 -6.5 -5.09173 | GAATATCTTAAAAAA GGTGGGA GAA TCTCACC TGCAAAAGCAACACT Csac_1297 1458378 - 1459220 + | degV family protein TERM 1358 1459246 - 1459271 + F 95 -10.5 -4.1922 | opp_overlap 1459243, overlap 1459249 ATCTCTATATTACTT TTAGCTACAGG ATAG CCTGTAGCTTA TTATATTTTATTTTT TERM 1359 1459249 - 1459268 + F 100 -12.2 -4.13421 | opp_overlap 1459243, overlap 1459246 TCTATATTACTTTTA GCTACAGG ATAG CCTGTAGC TTATTATATTTTATT Csac_1298 1459308 - 1461155 + | radical SAM domain-containing protein Csac_1299 1461136 - 1461771 + | hypothetical protein Csac_1300 1461771 - 1463486 + | ribonuclease Csac_1301 1463555 - 1464112 + | translation elongation factor P Csac_1302 1464216 - 1464704 + | hypothetical protein TERM 1360 1464745 - 1464725 - f 80 -5.3 -5.22039 | opp_overlap 1464725 TTGAAATCTAAAAAA GCCGGTGAT ATA ATTGCCGGC TTTTTTATTTTGTAT TERM 1361 1464725 - 1464745 + F 100 -9.7 -5.8901 | opp_overlap 1464725 TTGAAATCTAAAAAA GCCGGTGAT ATA ATTGCCGGC TTTTTTATTTTGTAT TERM 1362 1465345 - 1465327 - g 78 -6 -4.81359 | overlap 1465328 AAGTCAAATATAAAA GGTGTGTT TAT AACACACA ATGAGACATCTACTG TERM 1363 1465344 - 1465328 - g 78 -9.5 -3.47188 | overlap 1465327 AGTCAAATATAAAAG GTGTGTT TAT AACACAC AATGAGACATCTACT Csac_1303 1464931 - 1466094 + | aminotransferase, class V TERM 1364 1466843 - 1466855 + G 71 -9.1 -3.28785 | opp_overlap 1466842 1466841 AAAAGAAGGAATAGT GGCTG CAG CAGCC TTAGATGTTTTAGAA Csac_1304 1466100 - 1467695 + | D-3-phosphoglycerate dehydrogenase Csac_1305 1467736 - 1469010 + | hypothetical protein TERM 1365 1469055 - 1469097 + F 79 -3.6 -5.52096 | gap 1, overlap 1469056 AGACTGAAATTATGA AGGTTTGGATATTGATGCC CGATAT GGTGT-GATATCCAAACCG TTTTTTATTAGGTTT TERM 1366 1469056 - 1469096 + F 72 -7.1 -3.88817 | gap 1, overlap 1469055 GACTGAAATTATGAA GGTTTGGATATTGATGCC CGATAT GGTGT-GATATCCAAACC GTTTTTTATTAGGTT TERM 1367 1469585 - 1469595 + G 74 -4 -5.14965 | overlap 1469566 TAGACAGACCTGTTA CAAA GGT TTTG TTTTTTGATGAGCAT Csac_1306 1469059 - 1469949 + | Cof-like hydrolase TERM 1368 1470003 - 1469986 - T 72 -2.8 -5.44638 | ATAAGAAAAAGAAAA TCTTAT AAGTTA ATAAGA AAACGAGGGCTAATT Csac_1307 1471147 - 1470047 - | hypothetical protein TERM 1369 1471159 - 1471173 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT Csac_1308 1471407 - 1471781 + | S-adenosylmethionine decarboxylase proenzyme TERM 1370 1472004 - 1471969 - T 74 -7.6 -3.95554 | opp_overlap 1471971 1471999, overlap 1471967 1471970 TTACTTAATAAAATA TTTTGGTGCACAGATA AGAC TTTCTGTGCACCAATT TTTTTGGATTTACTA TERM 1371 1472003 - 1471970 - T 83 -11.1 -2.96609 | opp_overlap 1471971 1471999, overlap 1471969 1471967 TACTTAATAAAATAT TTTGGTGCACAGATA AGAC TTTCTGTGCACCAAT TTTTTTGGATTTACT TERM 1372 1471971 - 1472002 + T 100 -14.6 -5.58209 | opp_overlap 1471970 1471969 1471967, overlap 1471999 ACTTAATAAAATATT TTGGTGCACAGATA AGAC TTTCTGTGCACCAA TTTTTTTGGATTTAC Csac_1309 1473388 - 1472255 - | hypothetical protein TERM 1373 1474820 - 1474836 + GH 76 -6.5 -4.49756 | opp_overlap 1474819 1474820, overlap 1474815 AGGGTTAAGGCAAAT CTGCCTG AGA CAGGAAG TTTTGATGTTTGCAG TERM 1374 1475029 - 1475017 - gH 88 -4.9 -5.5762 | AGCAAAGACAAAAAA TACAA GTT TTGTA GATACAACATGTTAT TERM 1375 1478486 - 1478471 - gH 76 -3.3 -5.34555 | TCACATTACAAAAAA CTGAT GGAATT ATCAG AAGAGTATGGCAGAG Csac_1310 1473527 - 1479022 + | Ig domain-containing protein Csac_1311 1478997 - 1479593 + | hypothetical protein TERM 1376 1479593 - 1479614 + F 72 -3.6 -5.23316 | overlap 1479596 TATTGAGATCTTTTG AGAGGGGC AGAAGA GCCCCTTG TTTTTTAATATGCTA TERM 1377 1479596 - 1479611 + F 82 -7.5 -4.69962 | overlap 1479593 TGAGATCTTTTGAGA GGGGC AGAAGA GCCCC TTGTTTTTTAATATG Csac_1312 1479795 - 1480718 + | ribokinase-like domain-containing protein Csac_1313 1480763 - 1481032 + | hypothetical protein TERM 1378 1481549 - 1481563 + G 75 -10 -2.78463 | TAACCTTGATGTGAT TGCCCA TCT TGGGCA TATAATAAAAGACAT Csac_1314 1481064 - 1482422 + | hypothetical protein TERM 1379 1483023 - 1483001 - g 83 -7.1 -4.77036 | overlap 1483003 CTTTAGGACCAAAAA TAGAAAAGC ATGAG GCTTTTCCA AGAAAGACAAATGTC TERM 1380 1483021 - 1483003 - g 76 -7.5 -4.00443 | overlap 1483001 TTAGGACCAAAAATA GAAAAGC ATGAG GCTTTTC CAAGAAAGACAAATG TERM 1381 1483249 - 1483261 + G 70 -3.3 -5.06816 | GTCTTCATGACCGGC CCTGC TGA GGAGG TTTTTGTTGGGGAGT Csac_1315 1482451 - 1483287 + | diaminopimelate epimerase Csac_1316 1483374 - 1483538 + | hypothetical protein Csac_1317 1483596 - 1483832 + | preprotein translocase, SecG subunit TERM 1382 1483834 - 1483858 + F 100 -12.9 -5.45802 | opp_overlap 1483834 1483829 TAGTAATAAAGTAAA CCTAAGGTTGG TAG CCGACCTTGGG TTTTTATTTTAACCA TERM 1383 1483858 - 1483834 - f 87 -8.5 -4.22748 | opp_overlap 1483834, overlap 1483829 TAGTAATAAAGTAAA CCTAAGGTTGG TAG CCGACCTTGGG TTTTTATTTTAACCA Csac_1318 1483972 - 1484577 + | resolvase domain-containing protein TERM 1384 1484625 - 1484653 + GF 89 -11.9 -3.14211 | TTATGAGAAGATGGT CCTCTTGTATG AGGTATG CATACAAGAGG TTACTGGAAAGGCAT Csac_1319 1484546 - 1485001 + | hypothetical protein Csac_1320 1485077 - 1485634 + | metal dependent phosphohydrolase Csac_1321 1485624 - 1487804 + | ribonuclease R TERM 1385 1489210 - 1489177 - g 75 -5.4 -4.85545 | gap 1, opp_overlap 1489178 AGTAAAGGAAGAAAA GCCTGGACTTTCGCA GGTTT TGC-AAAGTGCAAGC ATTAAGTTTGAAAAT Csac_1322 1487849 - 1489456 + | DNA polymerase III, subunits gamma and tau TERM 1386 1490273 - 1490262 - g 76 -2.2 -5.4477 | overlap 1490250 AAATCCTGAAAAAAA GCCA CGCT TAGC TTCAAGAAAATCATC TERM 1387 1490338 - 1490352 + G 71 -8.6 -3.1876 | AGGGATGCATGTTCT GTTTGC TAT GCAAAC TTGATAAGTGCACTT TERM 1388 1490428 - 1490413 - g 76 -3.2 -5.30686 | opp_overlap 1490413 AAGATTGAGAAAAAA CTTTGC ATAG GCCAAG GTTTTAAGGGAAAAG Csac_1323 1489471 - 1490553 + | hypothetical protein TERM 1389 1490565 - 1490590 + F 93 -8.3 -5.16681 | opp_overlap 1490565 1490564 TTAAGAGTAAAAAAT GCGCATGCC AAAAAGAA GGTATGCGC TTTTATTGTTTTTAG TERM 1390 1490665 - 1490678 + F 71 -5.3 -4.56597 | CAGAGTTATCCACAT TATCC ACAA GGATA TTTTTAACAGAAAGG TERM 1391 1490804 - 1490789 - f 88 -6.2 -5.33124 | AATAACAAAACAAAA CTTTCT ACAT AGAAAG GATGGTCAATATGAT TERM 1392 1490903 - 1490887 - g 88 -8.1 -4.6951 | opp_overlap 1490886, overlap 1490876 AGGATTGAAAAGAAA CTTTCAA AAC TTGAAAG GTATGTTAAAATGAA Csac_1324 1490815 - 1491363 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 1393 1491402 - 1491388 - f 79 -2.8 -5.86976 | overlap 1491389 TGACAAAAGAAAAAA TTGATG AGA CATCAC TGCCCCCGCTCAAGA TERM 1394 1491407 - 1491437 + F 100 -17 -5.31519 | overlap 1491408 TGAGACATCACTGCC CCCGCTCAAGACAA AAA TTGTCTTGAGCGGA TTTTTGTTTGAATAT TERM 1395 1491408 - 1491436 + F 100 -20.5 -3.77285 | overlap 1491407 GAGACATCACTGCCC CCGCTCAAGACAA AAA TTGTCTTGAGCGG ATTTTTGTTTGAATA Csac_1325 1491520 - 1494066 + | preprotein translocase, SecA subunit TERM 1396 1494609 - 1494592 - g 81 -4.1 -5.52384 | opp_overlap 1494592 1494595 TGGGCAGCAAAAAAA GGTTACA AGGT TGAAACC TTGGATATTCTGCCT TERM 1397 1495053 - 1495042 - g 71 -4.4 -4.76312 | GAGAAGATCCAAAAA CTCA AGGG TGAG CAGACAGAGATTGGT Csac_1326 1494262 - 1495233 + | peptide chain release factor 2 TERM 1398 1495465 - 1495475 + G 75 -5.4 -4.7254 | opp_overlap 1495465 TACAGCTTTCCAAAT TCCA GCT TGGA TTTTTGGTGGACGAT Csac_1327 1495230 - 1495676 + | putative CheW protein TERM 1399 1495700 - 1495729 + F 100 -8 -5.66684 | opp_overlap 1495701 1495703 1495705, overlap 1495701 TTGAATTGGGTATAT ATAGAGTAAGGA ATAATA TCCTTACTCTAA TTTTTTTATAGATTA TERM 1400 1495728 - 1495701 - f 86 -11.5 -2.88579 | opp_overlap 1495700 1495701, overlap 1495703 1495705 TGAATTGGGTATATA TAGAGTAAGGA ATAATA TCCTTACTCTA ATTTTTTTATAGATT TERM 1401 1495701 - 1495728 + F 100 -11.5 -3.98383 | opp_overlap 1495701 1495703 1495705, overlap 1495700 TGAATTGGGTATATA TAGAGTAAGGA ATAATA TCCTTACTCTA ATTTTTTTATAGATT TERM 1402 1495726 - 1495703 - f 76 -9.7 -2.99319 | opp_overlap 1495701 1495700, overlap 1495701 1495705 AATTGGGTATATATA GAGTAAGGA ATAATA TCCTTACTC TAATTTTTTTATAGA Csac_1328 1495766 - 1497085 + | response regulator receiver sensor signal transduction histidine kinase TERM 1403 1497861 - 1497849 - g 79 -3.4 -5.56568 | ATATTATGAAAAAAA GAGT ACATG ACTC TTACGCCTCTGCAGG Csac_1329 1497104 - 1498288 + | response regulator receiver protein TERM 1404 1498540 - 1498529 - g 77 -3 -5.46706 | ATTGTAAAACAAAAA TATC CTAA GATA GTTAGAGTTGTATTA Csac_1330 1498313 - 1499353 + | response regulator receiver protein Csac_1331 1499443 - 1500732 + | 3-isopropylmalate dehydratase large subunit leuD 1500733 - 1501254 + | 3-isopropylmalate dehydratase small subunit Csac_1333 1501226 - 1502293 + | 3-isopropylmalate dehydrogenase TERM 1405 1502317 - 1502296 - f 100 -13.1 -4.35581 | opp_overlap 1502296 TGAAAATATCTAAAA GCTGCAGAA AATT TTCTGCAGC TTTTTTGTATTTATA TERM 1406 1502296 - 1502317 + F 100 -13.1 -5.59879 | opp_overlap 1502296 TGAAAATATCTAAAA GCTGCAGAA AATT TTCTGCAGC TTTTTTGTATTTATA Csac_1334 1502405 - 1503535 + | aldo/keto reductase Csac_1335 1503581 - 1503955 + | ribosomal protein S6 TERM 1407 1503991 - 1504011 + G 74 -9.7 -2.68071 | TAAAGTTATTTTAAT GGGTCGC TTAACGC GCGACCC TGAGTTTAGATTAAC TERM 1408 1504433 - 1504412 - g 72 -8.1 -3.53811 | GGTACCTCTTCGAAA CTGGATCTT GACG AAAATCCAG AAGATGATTTGCCGT Csac_1336 1503971 - 1504453 + | single-strand binding protein rpsR 1504489 - 1504764 + | 30S ribosomal protein S18 TERM 1409 1504811 - 1504766 - f 74 -6.9 -4.19678 | opp_overlap 1504774, overlap 1504768 1504774 TTATAGTTGAATAAA TACTACAAGCCTCTATGCC TGAGATAT GGCATAGAGGCTTTTTGCT TTGTGTGCAGTTTTC TERM 1410 1504809 - 1504768 - f 95 -11.7 -3.69469 | opp_overlap 1504774, overlap 1504766 1504774 ATAGTTGAATAAATA CTACAAGCCTCTATGCC TGAGATAT GGCATAGAGGCTTTTTG CTTTGTGTGCAGTTT TERM 1411 1504803 - 1504774 - f 100 -13.7 -3.60631 | opp_overlap 1504774, overlap 1504768 1504766 GAATAAATACTACAA GCCTCTATGCC TGAGATAT GGCATAGAGGC TTTTTGCTTTGTGTG TERM 1412 1504774 - 1504803 + F 100 -13.7 -5.07011 | opp_overlap 1504774 1504768 1504766 GAATAAATACTACAA GCCTCTATGCC TGAGATAT GGCATAGAGGC TTTTTGCTTTGTGTG Csac_1338 1505028 - 1506044 + | alanine racemase fucI 1506468 - 1508282 + | L-fucose isomerase Csac_1340 1508307 - 1509767 + | Alpha-L-fucosidase TERM 1413 1509778 - 1509820 + T 76 -6.4 -4.68446 | overlap 1509779 1509781 AGTAAAAACTTTCCT TTTTCAGGGCTATTCC AAAAAAAAGGC GGAATAGCCCTGATGG TTTTATCTGCTTTTT TERM 1414 1509779 - 1509819 + T 71 -7.7 -3.38627 | overlap 1509778 1509781 GTAAAAACTTTCCTT TTTCAGGGCTATTCC AAAAAAAAGGC GGAATAGCCCTGATG GTTTTATCTGCTTTT TERM 1415 1509781 - 1509817 + T 90 -12.5 -3.23768 | overlap 1509779 1509778 AAAAACTTTCCTTTT TCAGGGCTATTCC AAAAAAAAGGC GGAATAGCCCTGA TGGTTTTATCTGCTT Csac_1341 1510967 - 1509834 - | glycerate kinase rplM 1511222 - 1511650 + | 50S ribosomal protein L13 Csac_1343 1511666 - 1512064 + | ribosomal protein S9 TERM 1416 1512077 - 1512097 + F 100 -12.7 -5.27023 | TAAAAAGTTTTTGCA GCTCCTTTT CCA AAAAGGAGC TTTTATTTTTGCAAT TERM 1417 1512183 - 1512213 + F 100 -13.4 -4.4267 | AATTGTAATTGCCAA TGGGGGCATACC AAAAAAG GGTATGTCCCCA TTTTGCATTTTAGGC TERM 1418 1512977 - 1512994 + G 88 -11.3 -3.7791 | opp_overlap 1512976 1512973 1512972, overlap 1512973 TTGTAACAAATGTAG CTGCTGC TTCT GCAGCAG TTTCCTGGATGATTA TERM 1419 1513055 - 1513030 - g 70 -2.5 -5.24129 | opp_overlap 1513046, overlap 1513014 1513034 1513035 TGGCTTTACAAAAAA CCAAGTGCAAT TGGA ATTGCAACAGG TGCGATTGTTGGACT Csac_1344 1512268 - 1513488 + | ammonium transporter Csac_1345 1513507 - 1513842 + | nitrogen regulatory protein P-II TERM 1420 1513865 - 1513918 + T 72 -2.5 -5.40625 | opp_overlap 1513865 1513871, overlap 1513871 TAAAAACACCAAAAA TCAAAAGGGCTACCTCTCTGATAAA AAAT TTTTTTGCAAAGGTAGCCCTTTAAA TTTTTTGTATAATCT TERM 1421 1513912 - 1513871 - T 70 -4.5 -4.80167 | gap 1, opp_overlap 1513871 1513865, overlap 1513865 CACCAAAAATCAAAA GGGCTACCTCT-CTGATAAA AAA TTTTTTTGCAAAGGTAGCCC TTTAAATTTTTTGTA Csac_1346 1515041 - 1513914 - | glycosyl transferase, group 1 Csac_1347 1515173 - 1516501 + | DNA repair protein RadA Csac_1348 1516522 - 1517211 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1422 1517806 - 1517821 + G 85 -2.6 -5.8096 | opp_overlap 1517805 1517806, overlap 1517806 ATACTCGTTGCAAAG CTTTTT GGCA AAAAGG TTTTTATTTTTTCTC TERM 1423 1518762 - 1518744 - g 70 -5.4 -4.43571 | ACAAAAGGATGAAAA GTTTAAAA AGA TTCTAAAC TCAAGCGATTTAAAT TERM 1424 1518961 - 1518951 - g 74 -4 -5.14698 | opp_overlap 1518951, overlap 1518946 1518952 1518953 AAAGGCAAAAGAAAA TCTT TTA AAGA TTTTTAAAAACTTAA Csac_1349 1517488 - 1519326 + | WecB/TagA/CpsF family glycosyl transferase Csac_1350 1519327 - 1520178 + | hypothetical protein Csac_1351 1520282 - 1521130 + | transketolase domain-containing protein Csac_1352 1521132 - 1522073 + | transketolase, central region TERM 1425 1522124 - 1522095 - f 86 -10 -3.6707 | opp_overlap 1522096, overlap 1522096 ATTCAATAGGTGAAA TGCTGCCGCAAA TTTTGG TCTGCGGCAGCT TTTTATTTTGTTGTG TERM 1426 1522123 - 1522096 - f 100 -13.5 -2.7976 | opp_overlap 1522096, overlap 1522095 TTCAATAGGTGAAAT GCTGCCGCAAA TTTTGG TCTGCGGCAGC TTTTTATTTTGTTGT TERM 1427 1522096 - 1522123 + F 100 -12 -5.64321 | opp_overlap 1522096 1522095 TTCAATAGGTGAAAT GCTGCCGCAAAT TTTG GTCTGCGGCAGC TTTTTATTTTGTTGT Csac_1353 1522212 - 1523072 + | AraC family transcriptional regulator TERM 1428 1524568 - 1524579 + G 71 -4.4 -4.7261 | TTGGTGAAAGAATTC CAAC AGAT GTTG TTTATTTTGATGGCT TERM 1429 1525286 - 1525300 + G 75 -8.6 -3.60214 | TTTTAGCCTGCCACT TTTGGC AAG GCCAAA TTCTATAATTCCAAT Csac_1354 1523307 - 1525640 + | alpha-xylosidase YicI TERM 1430 1525743 - 1525769 + G 88 -7.5 -4.79949 | gap 1, overlap 1525747 TTGTAATTTCTGCTT TAATTCCCCAAA CTAT TTTGGGG-ATTA TTCTTTTTTTAAACC TERM 1431 1525747 - 1525766 + G 95 -10.8 -4.48073 | overlap 1525743 AATTTCTGCTTTAAT TCCCCAAA CTAT TTTGGGGA TTATTCTTTTTTTAA TERM 1432 1526771 - 1526758 - g 74 -4.5 -5.02231 | opp_overlap 1526758 TAAAAATATCAAAAA CCTGA TTGA CCAGG TATATCTGGCAGAGG Csac_1355 1525676 - 1527427 + | integral membrane sensor signal transduction histidine kinase TERM 1433 1527435 - 1527447 + F 74 -6.3 -4.41494 | opp_overlap 1527445 AGAGGTGAAGAGGTT TTGCT AAA AGCAA TTTTGATTGACGATG TERM 1434 1528183 - 1528171 - g 70 -2.7 -5.17507 | overlap 1528174 AAAACCTAATAAAAA TAGTT GGC AACCA AGTGGTAATTTCAAT Csac_1356 1527435 - 1528988 + | response regulator receiver protein TERM 1435 1529025 - 1529005 - f 76 -6.2 -4.55673 | opp_overlap 1529005, overlap 1529000 1529012 AAATATATCAGAAAA GAAGCTAC AAAAA ATAGCTTC TTTTTTTGTTTTTTA TERM 1436 1529005 - 1529025 + F 95 -5.5 -6.28401 | opp_overlap 1529005 1529000 1529012 AAATATATCAGAAAA GAAGCTA CAAAAAA TAGCTTC TTTTTTTGTTTTTTA Csac_1357 1529166 - 1530080 + | binding-protein-dependent transport systems inner membrane component TERM 1437 1530097 - 1530087 - f 91 -5.4 -5.82316 | ATGATGTAAAAAAAA CTTG ACT CAAG GGGGCATTTTAAAGT Csac_1358 1530111 - 1531001 + | binding-protein-dependent transport systems inner membrane component Csac_1359 1531096 - 1532793 + | hypothetical protein TERM 1438 1532827 - 1532864 + F 74 -6.3 -4.41241 | overlap 1532832 AAAAATTGTGGATTG TGAAGGGGCTGTCTTTT TAAA ATATGGCAGCCCTTTTA TTTTGTCAAGATTTG TERM 1439 1532832 - 1532859 + F 84 -6.2 -5.18371 | overlap 1532827 TTGTGGATTGTGAAG GGGCTGTCTTTT TAAA ATATGGCAGCCC TTTTATTTTGTCAAG Csac_1360 1532930 - 1533580 + | MgtC/SapB transporter TERM 1440 1534012 - 1534025 + G 72 -8.1 -3.54919 | opp_overlap 1534011 TACTGCCTCGAAATG CGCAC AAGA GTGCG TTTGGCGGAATAATT TERM 1441 1534782 - 1534759 - g 75 -9 -3.62224 | gap 1 ATATTTTGGCAATAA TCTCGTTGGGT GAT ACCCAA-GAGA GTGTAGAAAAGCTAA Csac_1361 1533645 - 1535126 + | Orn/Lys/Arg decarboxylase, major region Csac_1362 1535145 - 1535576 + | ribonuclease III Csac_1363 1535611 - 1536636 + | hypothetical protein TERM 1442 1537069 - 1537101 + G 85 -9.3 -4.08578 | opp_overlap 1537072 GAAGTTGTTTGCGAA GGAGAGCTACT GTTTGCAATTA AGTAGCTCTCC TTTCTAATTGAGTTT Csac_1364 1536673 - 1537095 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Csac_1365 1538125 - 1537088 - | DNA replication protein DnaC TERM 1443 1537174 - 1537160 - G 74 -5 -4.77925 | AAAAAAGTGCAAAAA CATGAA ATA CTCATG AAGCCTTCCCATTGT TERM 1444 1537565 - 1537585 + g 85 -4.1 -5.73672 | TCCTTTTTGAGAGGG TTTGTCAAA GTT TTTTACAAA TTTTTTTACTTCTTT Csac_1366 1539131 - 1538106 - | primosome, DnaD subunit TERM 1445 1539149 - 1539177 + H 100 -13.5 -3.04298 | overlap 1539146 ATAAAAATGCCCCCT TTTTGTGATAAAA TAA TTTTATCACAAAA TCATCTTTATTTTTA thyX 1539231 - 1540019 + | FAD-dependent thymidylate synthase Csac_1368 1540006 - 1540767 + | RNA methyltransferase Csac_1369 1540760 - 1541263 + | hypothetical protein Csac_1370 1541362 - 1541994 + | RNA polymerase factor sigma-70 TERM 1446 1542039 - 1542081 + F 100 -7.9 -5.82036 | opp_overlap 1542039 AGAGAGTTTTAGGAA GATGG-CTGCAGCAAAGTTGT GAG ATAGCCTTGC-GCAGGCCATC TTTTTTGTTTGTTGT TERM 1447 1542930 - 1542940 + G 70 -5.4 -4.41616 | overlap 1542937 TTGGTGTTGTAAACC CTGA TGG TCAG TTTATTTCAGCAAAT TERM 1448 1543464 - 1543478 + G 76 -10 -2.95093 | opp_overlap 1543463, overlap 1543449 1543463 GGTTTTTGGTAAGAG CCTCTG GTA CAGAGG ATTTGATTAGAATAT Csac_1371 1542161 - 1543564 + | phosphomannomutase TERM 1449 1543800 - 1543783 - g 73 -7.1 -4.14652 | overlap 1543786 AGGAAAAATACGAAA TAATACC AATT GGTATTA CAAAAGAGGGAAAAT Csac_1372 1543671 - 1544765 + | D-alanine--D-alanine ligase Csac_1373 1544771 - 1545574 + | glutamate racemase Csac_1374 1545600 - 1546037 + | hypothetical protein TERM 1450 1547507 - 1547489 - g 80 -6 -5.0133 | GAGCTGCTCAAAAAA CTTTTGGA GCT TCCAGAAG AGATAGAGATTGCAG Csac_1375 1546034 - 1547722 + | arginyl-tRNA synthetase TERM 1451 1547735 - 1547769 + F 100 -15.3 -5.74086 | opp_overlap 1547732 TAAATTAAAGATGGG GCCTCTTAACTATTT TTAAC AAATGGTTAAGAGGC TTTTTTGTTTACTTT TERM 1452 1548025 - 1548046 + G 73 -2.4 -5.36441 | gap 1, opp_overlap 1548015 1548025 GAAAACATCCAGAAG GAAG-AGTT AAAAA AACTACTTC TTTTTTGTCTGGAGC TERM 1453 1548608 - 1548592 - g 74 -5.1 -4.74084 | overlap 1548594 AAATTAAAACTAAAA GGTGTTG TTA CAACAGC AGAAAATTTATATGA TERM 1454 1549237 - 1549223 - g 71 -5 -4.68724 | opp_overlap 1549211 1549210, overlap 1549211 TCAGGGAATACAAAA TTCCCA TTA TGAGAA CACTTTTGCCACTGG Csac_1376 1547884 - 1549299 + | coenzyme F390 synthetase-like protein TERM 1455 1549901 - 1549881 - g 75 -6.9 -4.20918 | opp_overlap 1549880 1549881 GGCAAGGTCAAGAAA TCTCCTG AAATGGA CAGGAGA ATTACTACATACAAG Csac_1377 1549353 - 1550951 + | ferredoxin-dependent glutamate synthase TERM 1456 1550976 - 1551034 + T 90 -12.2 -3.16088 | opp_overlap 1550963 1550982, overlap 1550982 1550987 AATTTAATTTTTAGC CAAAA-ACTAAAGGGGCTGTTAACTAAT AGACA ATAAGTTA-CAGCCCCTTTTGTATTTTG GTTTTAATAAAATAT TERM 1457 1550982 - 1551027 + T 95 -11.4 -3.95369 | gap 1, opp_overlap 1550963 1550982, overlap 1550976 1550987 ATTTTTAGCCAAAAA CTAAAGGGGCTGTTAACTAAT AGACA ATAAGTTA-CAGCCCCTTTTG TATTTTGGTTTTAAT TERM 1458 1551027 - 1550982 - T 100 -11.4 -4.66163 | gap 1, opp_overlap 1550982 1550976 1550987, overlap 1550963 ATTTTTAGCCAAAAA CTAAAGGGGCTGTTAACTAAT AGACA ATAAGTTA-CAGCCCCTTTTG TATTTTGGTTTTAAT TERM 1459 1550987 - 1551022 + T 100 -9.9 -4.93333 | gap 1, opp_overlap 1550982, overlap 1550982 1550976 TAGCCAAAAACTAAA GGGGCTGTTAACTAAT AGACA ATAAGTTA-CAGCCCC TTTTGTATTTTGGTT Csac_1378 1552176 - 1551196 - | phage integrase family protein TERM 1460 1551473 - 1551494 + g 71 -7.3 -3.86684 | opp_overlap 1551468 1551473 1551474, overlap 1551474 CTTGGGCAAACAAAA TCATCAGGC TTTG GCTTGATGG TTTCATATAGATTCT TERM 1461 1552202 - 1552184 - H 70 -4.5 -4.77567 | opp_overlap 1552188, overlap 1552186 1552187 ATGTTCATAAGAAAA TACCCCC CTTTC GGGGTTA ATTATAAATCAAAAA Csac_1379 1552238 - 1552870 + | resolvase domain-containing protein Csac_1380 1552943 - 1553251 + | hypothetical protein Csac_1381 1553300 - 1553593 + | hypothetical protein Csac_1382 1553613 - 1553987 + | hypothetical protein TERM 1462 1554020 - 1553993 - gf 72 -9.2 -2.74496 | gap 1, opp_overlap 1553993 1553996, overlap 1553992 1553991 1553995 ATCGATATAAAAATT CAGGGCTGTCCAA AAA CCGGACAGCC-TG TTTTGCTTTTCTTTA TERM 1463 1553993 - 1554020 + GF 88 -7.8 -4.81644 | gap 1, opp_overlap 1553992 1553991 1553993 1553995, overlap 1553996 ATCGATATAAAAATT CAGGGCTGTCC AAAAACC GGACAGCC-TG TTTTGCTTTTCTTTA TERM 1464 1554019 - 1553995 - gf 71 -8.5 -2.90854 | opp_overlap 1553993 1553996, overlap 1553993 1553992 1553991 CGATATAAAAATTCA GGGCTGTCCAA AAA CCGGACAGCCT GTTTTGCTTTTCTTT TERM 1465 1553996 - 1554018 + GF 91 -10.6 -3.98231 | opp_overlap 1553995 1553993 1553992 1553991, overlap 1553993 GATATAAAAATTCAG GGCTGTCC AAAAACC GGACAGCC TGTTTTGCTTTTCTT Csac_1383 1553957 - 1554352 + | hypothetical protein Csac_1384 1554459 - 1555136 + | hypothetical protein Csac_1385 1555144 - 1556916 + | AAA ATPase TERM 1466 1557821 - 1557803 - g 74 -2.5 -5.25803 | AAGTTCGATAAAAAA TTACAAA GAGAT TTTGCAA ATACTGGGTGAAAAA TERM 1467 1558905 - 1558894 - g 70 -3 -5.13648 | CAAATATAAACAAAA CAAA GATG TTTG TAGAAGCTATTAAAA Csac_1386 1556934 - 1559111 + | hypothetical protein TERM 1468 1559234 - 1559222 - g 74 -2.7 -5.252 | overlap 1559224 GACCTTGAGAAAAAA CTTCT TCA AAAAG ACGCAAAAATACTGC Csac_1387 1559177 - 1560223 + | hypothetical protein Csac_1388 1560393 - 1561346 + | hypothetical protein TERM 1469 1561384 - 1561422 + F 100 -19.1 -4.84761 | opp_overlap 1561391, overlap 1561391 GAAGCCCGCATCCTA CACAAAAGCAGGCACTT CAAAA ATGTGCCTGCTTTTGTG TTTTTATGGGGGTAT TERM 1470 1561415 - 1561391 - f 95 -10.7 -4.54047 | opp_overlap 1561384 1561391 GCATCCTACACAAAA GCAGGCACTTC AAA AATGTGCCTGC TTTTGTGTTTTTATG TERM 1471 1561391 - 1561415 + F 100 -10 -5.02287 | opp_overlap 1561391, overlap 1561384 GCATCCTACACAAAA GCAGGCACTT CAAAA ATGTGCCTGC TTTTGTGTTTTTATG Csac_1389 1561474 - 1561806 + | hypothetical protein TERM 1472 1562378 - 1562404 + G 70 -6.6 -4.00934 | GATGGGCAAAACTGG TATGAGTCTGCC ACA GGCAAACTAATA TTTGATGTTTCAGAT Csac_1390 1561949 - 1562491 + | hypothetical protein TERM 1473 1562508 - 1562536 + F 100 -8.9 -5.55855 | opp_overlap 1562508 GATTTTGGATATCAA GAGGTTGCTGGTT TTC AAACGGTAACCTC TTTTGTTTTTTTGAG Csac_1391 1562578 - 1562832 + | hypothetical protein Csac_1392 1562878 - 1563735 + | hypothetical protein TERM 1474 1563745 - 1563775 + F 74 -7.5 -3.89346 | CTATAGGCGCTTTTA GGGGCTGCCCG GCAAGAAAA CGGTTAGCCCC TTTGTAAAATAAAAC Csac_1393 1563819 - 1564106 + | histone family protein DNA-binding protein TERM 1475 1564153 - 1564115 - f 74 -6.7 -4.34557 | opp_overlap 1564117 1564123, overlap 1564110 1564123 AAGCTAAAAAGTAAA CTTACCAAGCCTGCTGG CATCT CCAGCAGGCTTTATATT TTTTGTTGAGTAAAA TERM 1476 1564117 - 1564151 + F 100 -11.5 -5.4833 | opp_overlap 1564115 1564110 1564123, overlap 1564123 GCTAAAAAGTAAACT TACCAAGCCTGCTGG CATCT CCAGCAGGCTTTATA TTTTTTGTTGAGTAA TERM 1477 1564123 - 1564145 + F 100 -14.9 -4.7064 | opp_overlap 1564115 1564110 1564123, overlap 1564117 AAGTAAACTTACCAA GCCTGCTGG CATCT CCAGCAGGC TTTATATTTTTTGTT TERM 1478 1564145 - 1564123 - f 100 -14.9 -3.26204 | opp_overlap 1564123 1564117, overlap 1564115 1564110 AAGTAAACTTACCAA GCCTGCTGG CATCT CCAGCAGGC TTTATATTTTTTGTT Csac_1394 1564202 - 1565152 + | hypothetical protein TERM 1479 1565266 - 1565234 - f 70 -7.1 -3.68071 | overlap 1565224 1565223 1565235 TAAACGCTCAAAACA CGCTTAAAATCTCTT TTC AAGTGTTTTTAAGCA ACCAAAATGTAAACA TERM 1480 1565484 - 1565472 - g 79 -3.4 -5.58454 | TGGAGATGAAAAAAA GCAA TGTGT TTGC AGTCAGAATTCCCGA TERM 1481 1565546 - 1565534 - g 91 -6.3 -5.69068 | GAAAAAGACAAAAAA CAAGT TAT ACTTG ACGCTCTTGAGCTAT Csac_1395 1565462 - 1565707 + | hypothetical protein TERM 1482 1565710 - 1565746 + F 84 -5.2 -5.40474 | gap 1, opp_overlap 1565701, overlap 1565716 CTCAAAGCTGTAGCA GCACGAGGCAGGGAATA TTTC TCTTCCCTGCCTT-TAC TTTTTTTCAGGAGGT TERM 1483 1565716 - 1565741 + F 100 -11.9 -4.5187 | overlap 1565710 GCTGTAGCAGCACGA GGCAGGGAATA TTTC TCTTCCCTGCC TTTACTTTTTTTCAG Csac_1396 1565770 - 1566429 + | hypothetical protein TERM 1484 1566459 - 1566485 + F 74 -9.6 -2.62396 | ATTGCCATAGTATGG TTTAGCATATCA AAT TGCTATGCTAAA TAGTATGCAAAAATA TERM 1485 1566628 - 1566610 - f 95 -6 -5.86976 | opp_overlap 1566609 1566611 1566621, overlap 1566612 GTACAAAACAAAAAA TGTTTCAG GCT CGGAAACA CATTCTGTTTCCGAG TERM 1486 1566648 - 1566612 - f 70 -8.3 -3.03407 | gap 2, opp_overlap 1566609 1566611 1566621, overlap 1566610 ACAAAACAAAAAATG TTTCAGGCTCGGAAACA CATTC TGTTTCCGAGC--GAAA GTAGTATCCCCTCAT TERM 1487 1566786 - 1566760 - g 100 -17.4 -3.21595 | AATTTCCAGCAGCAA GCCGAAGCTGAC ATT ATCAGCTTCGGC GAAAGAAGCACTGCC TERM 1488 1566870 - 1566849 - g 100 -14.5 -3.14051 | opp_overlap 1566839 1566838, overlap 1566832 1566847 CTACTTGCAGCAAGA GCAGCAGCT TTTT AGCTGCTGC AAACAAAACAATTTC TERM 1489 1566888 - 1566909 + G 100 -8.7 -5.67063 | opp_overlap 1566884 1566891 ACAAAACAATTTCAA GCAGGAGCA AAAA TGCTACTGC TTTTTTTCTGCTGCA Csac_1397 1566695 - 1566967 + | hypothetical protein TERM 1490 1566953 - 1566987 + F 71 -7.8 -3.5485 | opp_overlap 1566940 1566957, overlap 1566947 1566954 AAGACAAAACCAGTA GCAAGCTCAAGCTGAT AGA GTCAGCTTGAGCAAGA TTGGTCTTTTCAATA TERM 1491 1566954 - 1566986 + F 86 -11.3 -2.72187 | opp_overlap 1566940 1566957, overlap 1566953 1566947 AGACAAAACCAGTAG CAAGCTCAAGCTGAT AGA GTCAGCTTGAGCAAG ATTGGTCTTTTCAAT TERM 1492 1566983 - 1566957 - f 100 -15.3 -3.27544 | opp_overlap 1566954 1566953 1566947, overlap 1566940 CAAAACCAGTAGCAA GCTCAAGCTGA TAGAG TCAGCTTGAGC AAGATTGGTCTTTTC TERM 1493 1567006 - 1567020 + F 70 -7.1 -3.73445 | opp_overlap 1567004, overlap 1567004 GTCTTTTCAATAACT GCAGC TGTTT GCTGC TGTTTGTTAATGCTA Csac_1398 1567104 - 1567352 + | hypothetical protein TERM 1494 1567488 - 1567462 - g 93 -5.9 -5.79526 | overlap 1567464 ACATGGCAAAAAAAA TATATGGTGGC AAATG GCCAGCATACA AACGTATTGAAAGAC TERM 1495 1567486 - 1567464 - g 76 -6.3 -4.53853 | overlap 1567462 ATGGCAAAAAAAATA TATGGTGGC AAATG GCCAGCATA CAAACGTATTGAAAG Csac_1399 1567377 - 1568312 + | hypothetical protein Csac_1400 1568309 - 1570147 + | TRAG family protein Csac_1401 1570195 - 1570971 + | RNA-binding S1 domain-containing protein TERM 1496 1570996 - 1571023 + F 100 -14.2 -5.79595 | opp_overlap 1570996 AAGGCAAAAGAAAAA GCCCCAGAGG AATTAAAC CCTCTGGGGC TTTTTTATTTTACAG TERM 1497 1571023 - 1570996 - f 100 -14.9 -5.49568 | opp_overlap 1570996 AAGGCAAAAGAAAAA GCCCCAGAGGA ATTAAA CCCTCTGGGGC TTTTTTATTTTACAG TERM 1498 1571111 - 1571083 - g 78 -6.8 -4.70107 | opp_overlap 1571089 1571104, overlap 1571089 GATGAAAATAACAAA CAAAAACCGC CTTGCTGCT GCGGTTCTTG GCGACCTCAAGAAGC TERM 1499 1571099 - 1571089 - g 76 -2.4 -5.52807 | opp_overlap 1571089, overlap 1571083 AATAACAAACAAAAA CCGC CTT GCTG CTGCGGTTCTTGGCG TERM 1500 1571285 - 1571232 - g 73 -7 -4.14615 | gap 2, overlap 1571233 1571236 1571283 ACAAAATATCAGAAA GGCAGGTGTATCGTATCCTGAGCCTT CTAA AAAACTCAGGACAC-ATACACAC-CC TCATAAAAAAACACG TERM 1501 1571287 - 1571233 - g 74 -9.5 -3.07142 | gap 1, overlap 1571232 1571236 1571283 CAAAATATCAGAAAG GCAGGTGTAT-CGTATCCTGAGCCTT CTAA AAAACTCAGGACACATACACACCCTC ATAAAAAAACACGAG TERM 1502 1571284 - 1571236 - g 83 -12 -2.73268 | gap 1, overlap 1571232 1571233 1571283 AATATCAGAAAGGCA GGTGTAT-CGTATCCTGAGCCTT CTAA AAAACTCAGGACACATACACACC CTCATAAAAAAACAC TERM 1503 1571510 - 1571497 - g 74 -2.5 -5.34365 | TCACAATAATAAAAA TAATA AAGA TATTA AAAAGTATAGAGAGA TERM 1504 1571538 - 1571524 - g 71 -8.6 -3.12138 | opp_overlap 1571524, overlap 1571522 TAAAAAGTATAGAGA GAACCT TTC AGGTTC TAATTACCACAATAA TERM 1505 1572384 - 1572352 - g 71 -7.1 -3.89215 | GCTCAGAAACCTAAA TCCACTTTCCTTGCC AGT AGCAAAGAAAACAGA AAAAGTTGCTCATGA Csac_1402 1571069 - 1572532 + | hypothetical protein Csac_1403 1572739 - 1573593 + | D12 class N6 adenine-specific DNA methyltransferase TERM 1506 1573578 - 1573612 + F 100 -13.1 -2.88044 | opp_overlap 1573557 1573578 1573583, overlap 1573583 CTTGCCAACAAACAA TAAAAGGTCTGCTTG ATACC TAAGCAGACCTTTTG CTATTTTATAAGCTC TERM 1507 1573612 - 1573578 - f 93 -10.2 -4.20367 | opp_overlap 1573578 1573583, overlap 1573557 1573583 CTTGCCAACAAACAA TAAAAGGTCTGCTT GATACCT AAGCAGACCTTTTG CTATTTTATAAGCTC TERM 1508 1573607 - 1573583 - f 100 -10.1 -5.08731 | opp_overlap 1573583 1573578, overlap 1573578 CAACAAACAATAAAA GGTCTGCTT GATACCT AAGCAGACC TTTTGCTATTTTATA TERM 1509 1573583 - 1573607 + F 100 -10.8 -4.58236 | opp_overlap 1573578 1573583, overlap 1573578 CAACAAACAATAAAA GGTCTGCTTG ATACC TAAGCAGACC TTTTGCTATTTTATA TERM 1510 1574348 - 1574358 + F 71 -6.8 -4.05747 | opp_overlap 1574348 1574346 CCAATCAGTTAAATA CACC TTA GGTG TTTATATAAAGTGTC TERM 1511 1574988 - 1574998 + G 72 -4 -5.00616 | AAGCTATGATGTGGG GTTT AAA AAAC TTTTTTCAGACAAGA Csac_1405 1574917 - 1575909 + | hypothetical protein TERM 1512 1575917 - 1575932 + F 70 -3.9 -5.07652 | AACAATAGATTTTGA GGCGG TTAACC CTGCC TTTTGTTTTCAGGAA TERM 1513 1576178 - 1576155 - f 95 -5.2 -5.93252 | opp_overlap 1576158 1576164, overlap 1576156 1576158 TGTAAAAATAAAAAA CTACCACAGC AAAA GCTGTGGTTT TTGTTTTTTGCAGCA TERM 1514 1576177 - 1576156 - f 82 -8.7 -4.13511 | opp_overlap 1576158 1576164, overlap 1576155 1576158 GTAAAAATAAAAAAC TACCACAGC AAAA GCTGTGGTT TTTGTTTTTTGCAGC TERM 1515 1576175 - 1576158 - f 93 -11.3 -3.6144 | opp_overlap 1576158 1576164, overlap 1576156 1576155 AAAAATAAAAAACTA CCACAGC AAAA GCTGTGG TTTTTGTTTTTTGCA TERM 1516 1576158 - 1576175 + F 100 -11.3 -5.75538 | opp_overlap 1576158 1576156 1576155, overlap 1576164 AAAAATAAAAAACTA CCACAGC AAAA GCTGTGG TTTTTGTTTTTTGCA TERM 1517 1576164 - 1576181 + F 75 -4.9 -5.02074 | opp_overlap 1576158 1576156 1576155, overlap 1576158 AAAAAACTACCACAG CAAAAGC TGTG GTTTTTG TTTTTTGCAGCATAA TERM 1518 1576363 - 1576353 - g 79 -3.2 -5.51078 | AAAAGAAAAATAAAA TGGC AAA ACCA TATGATACAAAGAAT Csac_1406 1576311 - 1576619 + | hypothetical protein Csac_1407 1576616 - 1576846 + | hypothetical protein TERM 1519 1576896 - 1576929 + F 100 -7.6 -5.75538 | gap 1, opp_overlap 1576895 CAAAAAGGAAGTTAG CCACGGCATAAGTTA GGAAG TAAATT-TGCCGTGG TTTTTGTTTTTTAAA Csac_1408 1577018 - 1577386 + | XRE family transcriptional regulator TERM 1520 1577622 - 1577588 - gf 91 -4.2 -5.89947 | TAAATTCAAAAAAAA CTCTTGGACATCAGCA TTT TACTGCTGCACATGAG TACTACCACCTCAAG Csac_1409 1577383 - 1578156 + | hypothetical protein TERM 1521 1578582 - 1578567 - gf 74 -2.6 -5.35815 | CATATCAAAGAAAAA TCATAA GCTT TCATGA AGGACAACAAATGTT Csac_1410 1578128 - 1578679 + | hypothetical protein Csac_1411 1578855 - 1580453 + | hypothetical protein TERM 1522 1580497 - 1580521 + F 70 -4.3 -4.92756 | opp_overlap 1580497 TAAGAACATTAAAGA GCAAGGG TCAAAATAAAC CCCTTGC TTTATTTTTAGTCAT TERM 1523 1581362 - 1581334 - g 90 -8.9 -4.49644 | overlap 1581335 AGGAAAAACGGAAAA GTTGCACCTGTAA AAT TTACTGGTGCAAT TAACAAGTTCTTGCC TERM 1524 1581361 - 1581335 - g 87 -12.4 -3.28159 | overlap 1581334 GGAAAAACGGAAAAG TTGCACCTGTAA AAT TTACTGGTGCAA TTAACAAGTTCTTGC TERM 1525 1582007 - 1581991 - g 73 -7.3 -4.17657 | CAGCACAGGGTAAAA CCTGTAA AGG TCACAGG GTTAACAGTTCCTGC Csac_1412 1580908 - 1582689 + | hypothetical protein Csac_1413 1582960 - 1582670 - | hypothetical protein TERM 1526 1583332 - 1583318 - g 76 -2.1 -5.4505 | TTTCTGAAGAAAAAA CAGAA CTTTC TCCTG CGCTGTTAGAGTTAA Csac_1414 1583119 - 1583430 + | XRE family transcriptional regulator TERM 1527 1584022 - 1584032 + G 72 -4 -5.00616 | AAGCTATGATGTGGG GTTT AAA AAAC TTTTTTCAGACAAGA Csac_1415 1583993 - 1584943 + | hypothetical protein TERM 1528 1584951 - 1584966 + F 70 -3.9 -5.07652 | AACAATAGATTTTGA GGCGG TTAACC CTGCC TTTTGTTTTCAGGAA TERM 1529 1585213 - 1585189 - f 90 -4.2 -5.93252 | opp_overlap 1585192 1585197, overlap 1585190 1585192 1585197 TGTAAAAATAAAAAA CTACCACAGC AAAGA GCTGTGGTTT TTGCTTTTTTTGTAG TERM 1530 1585212 - 1585190 - f 77 -7.7 -4.13511 | opp_overlap 1585192 1585197, overlap 1585189 1585192 1585197 GTAAAAATAAAAAAC TACCACAGC AAAGA GCTGTGGTT TTTGCTTTTTTTGTA TERM 1531 1585210 - 1585192 - f 87 -10.3 -3.6144 | opp_overlap 1585192 1585197, overlap 1585190 1585189 1585197 AAAAATAAAAAACTA CCACAGC AAAGA GCTGTGG TTTTTGCTTTTTTTG TERM 1532 1585192 - 1585210 + F 100 -10.3 -5.31158 | opp_overlap 1585192 1585190 1585189 1585197, overlap 1585197 AAAAATAAAAAACTA CCACAGC AAAGA GCTGTGG TTTTTGCTTTTTTTG TERM 1533 1585197 - 1585217 + F 85 -4.7 -5.626 | opp_overlap 1585192 1585190 1585189 1585197, overlap 1585192 TAAAAAACTACCACA GCAAAGAGC TGT GGTTTTTGC TTTTTTTGTAGCATA TERM 1534 1585460 - 1585446 - f 70 -4.2 -5.0809 | opp_overlap 1585437 1585447, overlap 1585437 1585447 AAGAAAGCATAAAAA TGCTCT AAT AGAGCT TGCTAAGAGATGATG TERM 1535 1585459 - 1585447 - f 73 -7.7 -3.62414 | opp_overlap 1585437 1585447, overlap 1585437 1585446 AGAAAGCATAAAAAT GCTCT AAT AGAGC TTGCTAAGAGATGAT TERM 1536 1585687 - 1585670 - g 78 -4.1 -5.27923 | TAACGTTATAAAAAA CCATCCA CTAA TTGATGG TAATAAGCGATTAGG Csac_1416 1585470 - 1585868 + | death-on-curing family protein TERM 1537 1585994 - 1586010 + F 100 -6.5 -5.99318 | opp_overlap 1585992 AAATAGAAATTCAGA CCGCAAA TTT TCTGCGG TTTTTGTTTTTTTTT TERM 1538 1586096 - 1586108 + F 70 -6.3 -4.18191 | opp_overlap 1586096 1586094, overlap 1586094 CAAACTCTAAAAATA CTTCT GCC AGAAG TTATTCTCTTTTTTG TERM 1539 1586407 - 1586440 + F 100 -7.6 -6.04324 | gap 1, opp_overlap 1586406 TCAAAAGGAAGTTAG CCACGGCAAAAGTTA GGAAG TAAAT-TTGCCGTGG TTTTTTGTTTTTTAG TERM 1540 1588518 - 1588499 - g 80 -5.8 -4.89838 | gap 1, overlap 1588500 1588501 TCAACAAAGACAAAA GCGCTTGTT CCC AACAAGC-C GGGTGTCATAGTTCA TERM 1541 1588517 - 1588501 - g 72 -9.5 -2.69739 | overlap 1588499 1588500 AACAAAGACAAAAGC GCTTGTT CCC AACAAGC CGGGTGTCATAGTTC Csac_1417 1586792 - 1588672 + | hypothetical protein TERM 1542 1588716 - 1588748 + G 79 -4.8 -5.14626 | opp_overlap 1588719, overlap 1588717 1588719 TCAAATCAAGATTAA AAAGAGCTGCTGCT TTTTT GGTAGCAGCTCTGC TTTTGTTTTCCTCAT TERM 1543 1588717 - 1588747 + G 74 -8.3 -3.67149 | opp_overlap 1588719, overlap 1588716 1588719 CAAATCAAGATTAAA AAGAGCTGCTGCT TTTTT GGTAGCAGCTCTG CTTTTGTTTTCCTCA TERM 1544 1588745 - 1588719 - g 89 -8 -4.90136 | opp_overlap 1588719 1588717 1588716 AATCAAGATTAAAAA GAGCTGCTGC TTTTTTG GTAGCAGCTC TGCTTTTGTTTTCCT TERM 1545 1588719 - 1588745 + G 82 -10.9 -3.39657 | opp_overlap 1588719, overlap 1588717 1588716 AATCAAGATTAAAAA GAGCTGCTGCT TTTTT GGTAGCAGCTC TGCTTTTGTTTTCCT Csac_1418 1588694 - 1590412 + | hypothetical protein TERM 1546 1590410 - 1590441 + F 100 -11.8 -5.61596 | gap 1, opp_overlap 1590414 1590416, overlap 1590414 AATATATATCCGCAG TAGACAGGGAAGGTG TTC TACCTTCCCTGT-TA TTTTTTTATACAGGT TERM 1547 1590438 - 1590414 - f 100 -14.4 -2.79501 | opp_overlap 1590410 1590414, overlap 1590416 TATATCCGCAGTAGA CAGGGAAGGT GTTCT ACCTTCCCTG TTATTTTTTTATACA TERM 1548 1590414 - 1590438 + F 100 -15.1 -4.89054 | opp_overlap 1590414 1590416, overlap 1590410 TATATCCGCAGTAGA CAGGGAAGGTG TTC TACCTTCCCTG TTATTTTTTTATACA TERM 1549 1590436 - 1590416 - f 83 -11.2 -2.94416 | opp_overlap 1590414 1590410, overlap 1590414 TATCCGCAGTAGACA GGGAAGGT GTTCT ACCTTCCC TGTTATTTTTTTATA TERM 1550 1590709 - 1590684 - f 73 -7.6 -3.61398 | opp_overlap 1590683, overlap 1590686 TTTGGCGGCTAATAA GAGGGAAGTC TTTTAT GACTTCCCTA CCCCTTTTTATGAGG TERM 1551 1590707 - 1590686 - f 84 -10.2 -3.38812 | opp_overlap 1590683, overlap 1590684 TGGCGGCTAATAAGA GGGAAGTC TTTTAT GACTTCCC TACCCCTTTTTATGA Csac_1419 1590741 - 1591151 + | hypothetical protein Csac_1420 1591151 - 1591756 + | hypothetical protein TERM 1552 1592354 - 1592373 + G 71 -7.2 -3.95073 | opp_overlap 1592354 1592352 AGGATATAAAAAGGA TCTTAGCA GGGG TGCTGAGA TTTCTGGGTGTAAAG Csac_1421 1591774 - 1592460 + | hypothetical protein TERM 1553 1593703 - 1593689 - g 86 -4.2 -5.62045 | ACATAGAAGAAAAAA GTACTG CGA CAGAAC AAACAGAAAATATGC Csac_1422 1592470 - 1593969 + | ATPase involved in chromosome partitioning-like protein Csac_1423 1593953 - 1594411 + | peptidase A24A, prepilin type IV Csac_1424 1594392 - 1594775 + | hypothetical protein Csac_1425 1594772 - 1595209 + | hypothetical protein TERM 1554 1595451 - 1595438 - g 79 -3.1 -5.48028 | TAAAGAAAAAGAAAA GCTTG TTGG CAAAC GTGCAGGTGTAACAA Csac_1426 1595226 - 1595810 + | hypothetical protein TERM 1555 1595953 - 1595963 + G 76 -6.8 -4.51799 | overlap 1595957 CTAGAACTTGACTTT TCGC CCG GCGA TTTTGTCGGTTTACT Csac_1427 1595839 - 1596552 + | ATPase involved in chromosome partitioning-like protein TERM 1556 1597036 - 1597026 - g 81 -5.4 -5.0925 | overlap 1597027 CGTCAAAACTAAAAA CTCT TGA AGAG CTCAAAAGCGGTTAT TERM 1557 1597103 - 1597090 - g 78 -6.7 -4.63928 | AGAGTACTTTAAAAA TGCTG TGCG CAGCA GAAAAAACATAGTGG Csac_1428 1596602 - 1597675 + | type II secretion system protein E TERM 1558 1598504 - 1598494 - g 70 -5.4 -4.4078 | TTCCCGGAAGCAAAA GAGT GCT ACTC AACTACTGGTGGGAA Csac_1429 1597693 - 1598604 + | type II secretion system protein TERM 1559 1598679 - 1598665 - g 71 -4.3 -4.7889 | AGAAATACGTAAAAA GGTTT GAGAA AAACC AAAAAGCAAAAGATA Csac_1430 1598613 - 1599410 + | type II secretion system protein Csac_1431 1599410 - 1599919 + | hypothetical protein Csac_1432 1599932 - 1600375 + | hypothetical protein Csac_1433 1600396 - 1600866 + | single-strand binding protein TERM 1560 1600867 - 1600885 + F 100 -13.2 -5.88565 | opp_overlap 1600855 1600870 GATCTGCCATTCTAA GCAGGGTT TTT AACCCTGC TTTTTTTGTTGTCAA Csac_1434 1600928 - 1601209 + | metal dependent phosphohydrolase Csac_1435 1601256 - 1601456 + | response regulator receiver protein TERM 1561 1602324 - 1602275 - g 79 -7.4 -4.4084 | gap 3, opp_overlap 1602274 1602279 1602280, overlap 1602279 AACCACATACCAAAA CAACCTGCCAGTATCAGCCAGTGTC TAT GACACTGGC-GA-ACTTGCAC-TTG ATTTTGACCCAAAGA TERM 1562 1602279 - 1602321 + G 81 -9.3 -3.66908 | gap 2, opp_overlap 1602275 1602279, overlap 1602274 1602280 ACATACCAAAACAAC CTGCCAGTATCAGCCAGTGTC TAT GACACTGGC-GA-ACTTGCAC TTGATTTTGACCCAA TERM 1563 1602321 - 1602279 - g 75 -9.3 -3.17461 | gap 2, opp_overlap 1602279 1602274 1602280, overlap 1602275 ACATACCAAAACAAC CTGCCAGTATCAGCCAGTGTC TAT GACACTGGC-GA-ACTTGCAC TTGATTTTGACCCAA TERM 1564 1602280 - 1602320 + G 86 -12.8 -2.79823 | gap 2, opp_overlap 1602279 1602275, overlap 1602279 1602274 CATACCAAAACAACC TGCCAGTATCAGCCAGTGTC TAT GACACTGGC-GA-ACTTGCA CTTGATTTTGACCCA TERM 1565 1603297 - 1603279 - g 72 -3.8 -5.03145 | overlap 1603294 GAAGCTTTGAAAAAA GGCATCCA GAG TACATGCC AGTAGATAGCAAATA Csac_1436 1601469 - 1603694 + | peptidase M23B Csac_1437 1603701 - 1603973 + | hypothetical protein Csac_1438 1603995 - 1604195 + | LexA family transcriptional regulator Csac_1439 1604211 - 1604879 + | hypothetical protein Csac_1440 1604876 - 1605055 + | hypothetical protein Csac_1441 1605156 - 1605866 + | hypothetical protein TERM 1566 1605886 - 1605869 - f 100 -12.7 -3.60151 | opp_overlap 1605869 TGTTTTAAAGTAGAA GGTGGGC TTGA GCCCACC TTTTTTGTTCTATGA TERM 1567 1605869 - 1605886 + F 100 -12.7 -5.60689 | opp_overlap 1605869 TGTTTTAAAGTAGAA GGTGGGC TTGA GCCCACC TTTTTTGTTCTATGA TERM 1568 1606135 - 1606119 - g 71 -5.1 -4.63089 | CAGCTTAAAAAAGAA CTTCACA GAT TGAGAAG ACTCTATAACGAAGC Csac_1442 1606056 - 1606265 + | hypothetical protein Csac_1443 1606280 - 1607140 + | phage integrase family protein Csac_1444 1607158 - 1607922 + | radical SAM domain-containing protein TERM 1569 1607965 - 1607935 - T 77 -8.3 -3.93489 | opp_overlap 1607934 1607932 TAATCACAAATATAA GAGGAGAAGGG TCATACTTT CCCTACTCCTC AAATTTTACTATTCC Csac_1445 1608226 - 1607957 - | hypothetical protein TERM 1570 1608383 - 1608369 - RH 77 -4.2 -5.38398 | AGAAAAATAGAAAAA CTACCA GGA TGGGAG GACAGCCTACTATGA Csac_1447 1610384 - 1609476 - | hypothetical protein Csac_1446 1608395 - 1609534 + | hypothetical protein TERM 1571 1610111 - 1610121 + gF 72 -4 -4.98255 | opp_overlap 1610116 TATAAAGCTTCTCTA CAAA ATC TTTG TTTTTATCGTTAAAC Csac_1448 1610495 - 1610986 + | hypothetical protein TERM 1572 1611082 - 1611125 + F 93 -8.5 -4.76802 | gap 3, opp_overlap 1611082 ATCAGGGAGAGTAAA GCCACAGAGA--GTTTGC-AGT TTA ACTTGCAAATTATCTCTGTGGC TTTCTTATTTTTCAA TERM 1573 1611570 - 1611536 - f 70 -7.2 -3.57387 | opp_overlap 1611543, overlap 1611540 AAGAGAGGTTGCAAA CAAAGTACCAGAACAT GAA ATTCTCTGGTTCCTTG GCAGACATCAGGAAG TERM 1574 1611751 - 1611770 + F 100 -13.6 -4.15833 | opp_overlap 1611755 TGTGGGAATATTGAT GCAAGGGC TGTT GCCCTTGC TTTTGGAGTAATACT TERM 1575 1612046 - 1612011 - f 100 -14.3 -5.79595 | opp_overlap 1612018 GGTCAAAATAAAAAA GAAAGTAGTTAGGTA ATTCCA TACCTAACTACTTCC CCACTACCTAAACAC TERM 1576 1612533 - 1612553 + G 74 -4.7 -4.7497 | opp_overlap 1612534, overlap 1612534 AAAGAAATTAAACTT ACGTTTGAC ACA GTTAAACGC TTTTTAGTCAGTGGG TERM 1577 1612534 - 1612552 + G 70 -8.2 -3.445 | opp_overlap 1612534, overlap 1612533 AAGAAATTAAACTTA CGTTTGAC ACA GTTAAACG CTTTTTAGTCAGTGG Csac_1450 1612449 - 1613483 + | phage recombination protein Bet TERM 1578 1613509 - 1613487 - f 93 -9.1 -4.87786 | opp_overlap 1613486, overlap 1613488 GCAAGTGTATAAAAA TGGGAGAGG TTCTC CCTCTCCCT CTGAGTTAAACCAAT TERM 1579 1613508 - 1613488 - f 91 -12.6 -3.51948 | opp_overlap 1613486, overlap 1613487 CAAGTGTATAAAAAT GGGAGAGG TTCTC CCTCTCCC TCTGAGTTAAACCAA TERM 1580 1613772 - 1613755 - g 70 -3.4 -5.055 | TCAACTGGTAAAAAA CGCACT AAAACA AGTACG GGAATTTGTCGATGA Csac_1451 1613633 - 1613863 + | hypothetical protein TERM 1581 1614108 - 1614080 - g 76 -7.5 -4.16921 | GAAGAACTGGCAAAA TTTTTGACTACTG GTG CAGAAGGCAAAAA CGTTAAACAGTTCAT Csac_1452 1613927 - 1614892 + | hypothetical protein TERM 1582 1614928 - 1614900 - f 71 -8.8 -2.96212 | opp_overlap 1614905, overlap 1614899 AAGAGTAAAAAAACG GGGTTGAGAAGG CTATC CCTTCTCTTCCC TCTCCTTTCGGAGTA TERM 1583 1614905 - 1614923 + F 74 -8.9 -3.17725 | opp_overlap 1614900 1614899 TAAAAAAACGGGGTT GAGAAGG CTATC CCTTCTC TTCCCTCTCCTTTCG Csac_1453 1614966 - 1615448 + | DNA repair protein RadC TERM 1584 1615466 - 1615448 - f 81 -10.3 -2.93348 | opp_overlap 1615446 1615445 1615463 GGCAGGAATATTATA GGAGAGG TGCTC CCTCTCC CACTTGTCGGAGTTT Csac_1454 1615545 - 1616663 + | hypothetical protein TERM 1585 1616643 - 1616681 + F 100 -6.9 -5.80364 | opp_overlap 1616644 1616647, overlap 1616644 1616647 CTTATCGCTTCTAAA ATAAGAGGAGAGTGT GCCTAAAAA ATACTCTCCTCTTAC TTTTTTTGTTGCAAT TERM 1586 1616644 - 1616680 + F 91 -10.4 -4.06592 | opp_overlap 1616644 1616647, overlap 1616643 1616647 TTATCGCTTCTAAAA TAAGAGGAGAGTGT GCCTAAAAA ATACTCTCCTCTTA CTTTTTTTGTTGCAA TERM 1587 1616680 - 1616644 - f 79 -8.2 -4.08216 | opp_overlap 1616643 1616644 1616647, overlap 1616647 TTATCGCTTCTAAAA TAAGAGGAGAGTGT GCCTAAAAA ATACTCTCCTCTTA CTTTTTTTGTTGCAA TERM 1588 1616647 - 1616677 + F 77 -7.7 -4.12421 | opp_overlap 1616647 1616644, overlap 1616644 1616643 TCGCTTCTAAAATAA GAGGAGAGTGT GCCTAAAAA ATACTCTCCTC TTACTTTTTTTGTTG Csac_1455 1616775 - 1617179 + | hypothetical protein TERM 1589 1617402 - 1617421 + F 82 -7.8 -4.52589 | opp_overlap 1617403 1617412, overlap 1617403 CAAAAGTAAAACAAA AGGCAGGT AACA ACCTGCCC TTTTCTGTAAAAAAG TERM 1590 1617403 - 1617420 + F 88 -11.3 -3.31232 | opp_overlap 1617403 1617412, overlap 1617402 AAAAGTAAAACAAAA GGCAGGT AACA ACCTGCC CTTTTCTGTAAAAAA TERM 1591 1617420 - 1617403 - f 100 -11.3 -5.24291 | opp_overlap 1617403 1617402, overlap 1617412 AAAAGTAAAACAAAA GGCAGGT AACA ACCTGCC CTTTTCTGTAAAAAA TERM 1592 1617750 - 1617725 - f 100 -16.3 -3.59979 | GTGGGGTATTTGAAA GGGAGAAAGGT AAAT ACCTTTCTCCC TCCCCACAAACCTTC TERM 1593 1617852 - 1617819 - f 75 -9.7 -2.91511 | opp_overlap 1617825, overlap 1617822 1617825 CATATAGAGATTATA TCACAAGTCCATTGC CCGC ACAATGGACTTGTAG CCTAAACCAAAATGG TERM 1594 1617849 - 1617822 - f 100 -13.6 -2.69674 | opp_overlap 1617825, overlap 1617819 1617825 ATAGAGATTATATCA CAAGTCCATTGC CCGC ACAATGGACTTG TAGCCTAAACCAAAA TERM 1595 1617846 - 1617825 - f 80 -9.5 -3.49114 | opp_overlap 1617825, overlap 1617822 1617819 GAGATTATATCACAA GTCCATTGC CCGC ACAATGGAC TTGTAGCCTAAACCA TERM 1596 1617825 - 1617846 + F 74 -8.8 -3.32844 | opp_overlap 1617825 1617822 1617819 GAGATTATATCACAA GTCCATTG CCCGCA CAATGGAC TTGTAGCCTAAACCA TERM 1597 1618193 - 1618178 - g 71 -4.8 -4.64334 | AAGGGCTCAATAAAA GAAATA AGGA TATTTC AATTGCACCTATTTT Csac_1456 1618117 - 1619379 + | seryl-tRNA synthetase TERM 1598 1619421 - 1619394 - T 100 -9.9 -5.88061 | opp_overlap 1619394 AAAAAAGCAAAAAAA GGTAGCAGACT TTTAAT AGACTGCTACC TTTTTTTATGAACAA TERM 1599 1619394 - 1619421 + T 100 -9.9 -5.60993 | opp_overlap 1619394 AAAAAAGCAAAAAAA GGTAGCAGACT TTTAAT AGACTGCTACC TTTTTTTATGAACAA Csac_1457 1620115 - 1619417 - | hypothetical protein TERM 1600 1620424 - 1620398 - g 76 -6 -4.58395 | gap 1, opp_overlap 1620398 1620397 1620400 GCCAGGGTGCAAAAA CAGCTTCA-CT TCTTTT AGCTGAAGCTG CTTTCAACACAGGCA Csac_1458 1620343 - 1620918 + | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Csac_1459 1620918 - 1621217 + | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit Csac_1460 1621245 - 1622426 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Csac_1461 1622443 - 1623381 + | thiamine pyrophosphate binding domain-containing protein TERM 1601 1623407 - 1623455 + F 77 -7.6 -3.98952 | gap 1, opp_overlap 1623414, overlap 1623414 ATATAAATGGGCTTT CCAAAAGGGTTCTTTGGCC-GCA AGTT TACTGGTCAAAGGACCTTTTTTG TTTAACTTTATTTTG TERM 1602 1623414 - 1623448 + F 93 -6.5 -5.67283 | gap 1, opp_overlap 1623414, overlap 1623407 TGGGCTTTCCAAAAG GGTTCTTTGGCC-GCA AGTT TACTGGTCAAAGGACC TTTTTTGTTTAACTT TERM 1603 1624286 - 1624302 + G 76 -6.6 -4.44461 | ATGCTCTAAAAGTTG TGCAGA GAAAG TCTGCA TTTTATAAGCTTCTT Csac_1462 1623532 - 1624350 + | prephenate dehydratase Csac_1463 1624354 - 1625280 + | hypothetical protein TERM 1604 1625687 - 1625707 + G 81 -5.5 -5.15381 | CAAGCCAAGGCTGGA TAGTTTTGA GTA TCAGAGCTA TTTTTTCAATGTCTT TERM 1605 1626483 - 1626467 - g 85 -9.5 -4.07975 | TAACCCAACTATAAA GGATTTC GTT GAAATCC TAAAATCAGATTCTC Csac_1464 1625277 - 1627280 + | phosphoesterase domain-containing protein Csac_1465 1627308 - 1627754 + | ribosomal protein L9 Csac_1466 1627773 - 1629119 + | replicative DNA helicase Csac_1467 1629140 - 1630390 + | adenosylhomocysteinase TERM 1606 1631425 - 1631410 - g 78 -9 -3.66921 | AATGGCAACTGTAAA TGCTGC GATG GCAGCA GATATTCACAACACA Csac_1468 1630394 - 1631683 + | amidohydrolase Csac_1469 1631717 - 1633273 + | integral membrane protein MviN TERM 1607 1634167 - 1634145 - g 81 -11.4 -2.65808 | AGCTTGAAGAAGGGA CTTTGCATCC AAG AGATGCAAAG ATGAGACTTGCAAGA Csac_1470 1633301 - 1634491 + | tyrosyl-tRNA synthetase TERM 1608 1634482 - 1634512 + F 100 -13.5 -5.80951 | opp_overlap 1634482, overlap 1634468 ATTTGTAAAAGTAAA GCTTTTGTAAAGG TTTTT CCTTTGCAAAAGC TTTTTTATTTTGCAT TERM 1609 1634512 - 1634482 - f 100 -11.3 -4.20136 | opp_overlap 1634468 1634482 ATTTGTAAAAGTAAA GCTTTTGTAAAGG TTTTT CCTTTGCAAAAGC TTTTTTATTTTGCAT Csac_1471 1634822 - 1635622 + | hypothetical protein Csac_1472 1635666 - 1636025 + | hypothetical protein TERM 1610 1636122 - 1636092 - f 83 -8.4 -4.20136 | opp_overlap 1636092 ATTGGTAAAACTAAA GCTTTTGTGAAG GAAAAAT CTTCGCAAAAGC TTTTTTGATTTTCAT TERM 1611 1636092 - 1636122 + F 100 -11.3 -5.48054 | opp_overlap 1636092 ATTGGTAAAACTAAA GCTTTTGTGAAGG AAAAA TCTTCGCAAAAGC TTTTTTGATTTTCAT TERM 1612 1636971 - 1636955 - g 74 -5.2 -4.72333 | AATTATATGCAAAAA TCTTCT TTAGC AGAAGA CAGAGATGATGAATT Csac_1473 1636589 - 1637248 + | hypothetical protein TERM 1613 1637679 - 1637717 + F 93 -6.1 -5.54079 | opp_overlap 1637682, overlap 1637680 1637682 CAAATTTGTGAAGAT AAAGCTTTTGTAAAGGG TATAT TCCTTTGCAAAAGCTAA TTTTTTAATTTTTAA TERM 1614 1637680 - 1637716 + F 83 -9.6 -3.90007 | opp_overlap 1637682, overlap 1637679 1637682 AAATTTGTGAAGATA AAGCTTTTGTAAAGGG TATAT TCCTTTGCAAAAGCTA ATTTTTTAATTTTTA TERM 1615 1637682 - 1637714 + F 91 -12.2 -3.48747 | opp_overlap 1637682, overlap 1637680 1637679 ATTTGTGAAGATAAA GCTTTTGTAAAGGG TATAT TCCTTTGCAAAAGC TAATTTTTTAATTTT TERM 1616 1637714 - 1637682 - f 88 -9.3 -4.19177 | opp_overlap 1637680 1637679 1637682 ATTTGTGAAGATAAA GCTTTTGTAAAGG GTATATT CCTTTGCAAAAGC TAATTTTTTAATTTT TERM 1617 1638374 - 1638398 + G 78 -8.8 -3.67945 | opp_overlap 1638373 1638376, overlap 1638369 AAAGACCGATGTAAT CACAATTATA TTTAT TATAATTGTG TTAGTTCTTGTTTTC TERM 1618 1638427 - 1638456 + G 79 -7.3 -4.39092 | overlap 1638422 TCCGCTCTCCTGTCA CACCAATTGTT TCACTTTT AACAGTTGGTG TTTCGTTTTTAATTT TERM 1619 1639752 - 1639729 - g 70 -6.8 -4.01411 | overlap 1639730 1639743 TATCAAAAATTGAAA CTGAAGCAAA TAAG TTTGCTCCAA AGCTAAAAGAGTTTT Csac_1474 1637811 - 1640891 + | MMPL domain-containing protein TERM 1620 1640925 - 1640913 - f 71 -7.7 -3.37655 | opp_overlap 1640917, overlap 1640911 1640917 TCTTTGAAAAAATTA GGAAG CTG CTTCC AGGAAAGGGGGCAGC TERM 1621 1640917 - 1640940 + F 100 -8.1 -5.88565 | opp_overlap 1640913 1640911 1640917 TGAAAAAATTAGGAA GCTGCTTCC AGGAAA GGGGGCAGC TTTTTTTATTGTGAG TERM 1622 1641393 - 1641374 - g 74 -3 -5.28942 | gap 1, opp_overlap 1641374, overlap 1641368 TATGTTAAAGAAAAA TATGGACAT ATT AT-TCCATA TATTCAACTTAAGGA Csac_1475 1641242 - 1641526 + | hypothetical protein Csac_1476 1641843 - 1642325 + | hypothetical protein TERM 1623 1642462 - 1642438 - g 77 -2.9 -5.59502 | TAAAAAATTAAAAAA GAGCATCAA TGGTAAG TTGATTCTC AAAGAAATAAACCTA Csac_1477 1642310 - 1643221 + | ABC transporter related TERM 1624 1643274 - 1643258 - g 71 -4.5 -4.78752 | opp_overlap 1643258 ATTAGAAGTCAAAAA TTACATT AAA AATGCAA TTATATTATTACTAA TERM 1625 1643590 - 1643606 + G 73 -3.1 -5.11254 | TATTAAAAAGTCATT TGAATAA CAT TTATTTA TTTCTTTTTGTTATT Csac_1478 1643223 - 1643879 + | hypothetical protein TERM 1626 1644844 - 1644869 + G 81 -7.1 -4.6955 | gap 1, opp_overlap 1644851, overlap 1644835 TTTTCTTATTTTCAT TAGGAA-ATACA TTT TGTATGTTCCTA TTTTCTGTATTAATA Csac_1480 1644597 - 1645781 + | major facilitator transporter Csac_1482 1648191 - 1647244 - | transposase, IS4 family protein TERM 1627 1648454 - 1648472 + H 71 -3.2 -5.20783 | TAGCAGGTTATTTTA TTTTTTTG GGT CTAAAAAA TTTTTCTCTTTCAGT Csac_1484 1649554 - 1649871 + | hypothetical protein Csac_1485 1651073 - 1649844 - | transposase, mutator type TERM 1628 1649937 - 1649952 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 1629 1650474 - 1650488 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA Csac_1486 1651093 - 1652157 + | transposase IS116/IS110/IS902 family protein TERM 1630 1652845 - 1652834 - f 71 -3 -5.2696 | opp_overlap 1652834 GTAAAAGTGAAAAAA CAAT AATA ATTG TTTCACATAATATTG TERM 1631 1653786 - 1653764 - g 73 -6.4 -4.1822 | opp_overlap 1653769 TTTTATGTTAAGAAA TAAAATTTCC TTG GGAGATTTTA TAAAAATAGCTGGAT TERM 1632 1653975 - 1653965 - g 74 -2.6 -5.4251 | TGTAGAGATAAAAAA TATA GGA TATA GGTTTGATAAAGATT Csac_1489 1652952 - 1654556 + | ABC transporter related Csac_1490 1654586 - 1654993 + | RND superfamily drug efflux protein TERM 1633 1655050 - 1655008 - f 78 -9.3 -3.42684 | opp_overlap 1655012 1655018, overlap 1655012 1655018 AAAGTGACCTAAAGA TAATTAGAAAGCTGCTACC GGAAA GGTGGCAGCTTTTTATTTA CATGGAAATGTAAGA TERM 1634 1655046 - 1655012 - f 79 -10.1 -2.90029 | opp_overlap 1655012 1655018, overlap 1655008 1655018 TGACCTAAAGATAAT TAGAAAGCTGCTACC GGAAA GGTGGCAGCTTTTTA TTTACATGGAAATGT TERM 1635 1655012 - 1655046 + F 100 -14.5 -3.65529 | opp_overlap 1655012 1655008 1655018, overlap 1655018 TGACCTAAAGATAAT TAGAAAGCTGCTACC GGAAA GGTGGCAGCTTTTTA TTTACATGGAAATGT TERM 1636 1655040 - 1655018 - f 85 -9.1 -4.14908 | opp_overlap 1655018 1655012, overlap 1655012 1655008 AAAGATAATTAGAAA GCTGCTACC GGAAA GGTGGCAGC TTTTTATTTACATGG TERM 1637 1655018 - 1655040 + F 100 -11.3 -5.30616 | opp_overlap 1655012 1655008 1655018, overlap 1655012 AAAGATAATTAGAAA GCTGCTACC GGAAA GGTGGCAGC TTTTTATTTACATGG Csac_1491 1655373 - 1656275 + | hypothetical protein Csac_1492 1656259 - 1656684 + | hypothetical protein TERM 1638 1656766 - 1656803 + F 84 -6.4 -5.27335 | opp_overlap 1656766 1656769 TTTCTTAAGCTTAAA TAGCCTGCAATCCTTT ATTTTC AAAGATTTGCAGGTTA TTTTTATTTCAGCAA TERM 1639 1656803 - 1656766 - f 70 -7.1 -3.66178 | opp_overlap 1656766, overlap 1656769 TTTCTTAAGCTTAAA TAGCCTGCAATCCTTTA TTTT CAAAGATTTGCAGGTTA TTTTTATTTCAGCAA TERM 1640 1656829 - 1656851 + F 84 -2.1 -6.12458 | gap 1, opp_overlap 1656819 AGCAATCTACAAAAG TC-CCTTTGT AAAA ATAAAGGCGA TTTTTTCTTTTTTTG TERM 1641 1657327 - 1657285 - f 78 -9.3 -3.42684 | opp_overlap 1657289 1657295, overlap 1657289 1657295 AAAGTGACCTAAAGA TAATTAGAAAGCTGCTACC GGAAA GGTGGCAGCTTTTTATTTA CATGGAAATGTAAGA TERM 1642 1657323 - 1657289 - f 79 -10.1 -2.90029 | opp_overlap 1657289 1657295, overlap 1657285 1657295 TGACCTAAAGATAAT TAGAAAGCTGCTACC GGAAA GGTGGCAGCTTTTTA TTTACATGGAAATGT TERM 1643 1657289 - 1657323 + F 100 -14.5 -3.65529 | opp_overlap 1657285 1657289 1657295, overlap 1657295 TGACCTAAAGATAAT TAGAAAGCTGCTACC GGAAA GGTGGCAGCTTTTTA TTTACATGGAAATGT TERM 1644 1657295 - 1657317 + F 100 -11.3 -5.30616 | opp_overlap 1657295 1657289 1657285, overlap 1657289 AAAGATAATTAGAAA GCTGCTACC GGAAA GGTGGCAGC TTTTTATTTACATGG TERM 1645 1657317 - 1657295 - f 85 -9.1 -4.14908 | opp_overlap 1657289 1657295, overlap 1657289 1657285 AAAGATAATTAGAAA GCTGCTACC GGAAA GGTGGCAGC TTTTTATTTACATGG TERM 1646 1658203 - 1658162 - g 76 -9.9 -2.99545 | overlap 1658170 GTCACAGATTAGACA TTTTTAAAGACTCTTTT GATTTTAG AAAAGAATCTTTAAAAA GGCTGATAGAAAAAC Csac_1494 1657786 - 1658253 + | hypothetical protein TERM 1647 1659083 - 1659124 + F 95 -10.4 -4.55446 | gap 1, overlap 1659070 1659084 ATGCATGATAGTGAT GCCTCTCTTGTGGTTATAT ATTTA AT-TGACCACAAGAGAGGA TTTTCATATTTCTTG TERM 1648 1659084 - 1659123 + F 100 -13.9 -3.31641 | gap 1, overlap 1659083 TGCATGATAGTGATG CCTCTCTTGTGGTTATAT ATTTA AT-TGACCACAAGAGAGG ATTTTCATATTTCTT Csac_1496 1659260 - 1660459 + | hypothetical protein TERM 1649 1660516 - 1660484 - f 77 -3.8 -5.33866 | gap 2, opp_overlap 1660496, overlap 1660486 1660487 1660496 GAAAGGCAGAAAAAA GATTTATAAAAATGAC CAA GTCATTTTTA-AAA-C GTCTGATAGTGAGAG TERM 1650 1660515 - 1660486 - f 80 -7.5 -4.28383 | gap 1, opp_overlap 1660496, overlap 1660484 1660487 1660496 AAGGCAGAAAAAAGA TTTATAAAAATGAC CAA GTCATTTTTA-AAA CGTCTGATAGTGAGA TERM 1651 1660515 - 1660487 - f 74 -9.1 -3.15403 | opp_overlap 1660496, overlap 1660486 1660484 1660496 AGGCAGAAAAAAGAT TTATAAAAATGAC CAA GTCATTTTTAAAA CGTCTGATAGTGAGA TERM 1652 1660506 - 1660496 - f 74 -5.4 -4.92363 | opp_overlap 1660496, overlap 1660486 1660487 1660484 AAAGATTTATAAAAA TGAC CAA GTCA TTTTTAAAACGTCTG TERM 1653 1660496 - 1660506 + F 71 -5.4 -4.59109 | opp_overlap 1660496 1660486 1660487 1660484 AAAGATTTATAAAAA TGAC CAA GTCA TTTTTAAAACGTCTG Csac_1497 1661177 - 1661968 + | rare lipoprotein A TERM 1654 1662021 - 1661972 - g 74 -4.8 -4.81851 | gap 3, opp_overlap 1661972 1661979 1661981 1661984 1662010, overlap 1661974 1661981 1661984 ATTCAAAGTTAAAAA TAGATGTAATAAGGATAGTAGCAAT TTT ATTGCTACTATCCTTAT--C-TTTA GGAATTTATAATAAA TERM 1655 1661979 - 1662017 + G 100 -17.8 -3.65426 | opp_overlap 1661974 1661972 1661981 1661984, overlap 1661972 1661981 1661984 1662010 GTTAAAAATAGATGT AATAAGGATAGTAGCAAT TTT ATTGCTACTATCCTTATC TTTAGGAATTTATAA TERM 1656 1661981 - 1662015 + G 100 -20.4 -3.40173 | opp_overlap 1661981 1661974 1661972 1661984, overlap 1661979 1661972 1661984 1662010 TAAAAATAGATGTAA TAAGGATAGTAGCAAT TTT ATTGCTACTATCCTTA TCTTTAGGAATTTAT TERM 1657 1662015 - 1661981 - g 100 -20.4 -3.25666 | opp_overlap 1661979 1661972 1661981 1661984 1662010, overlap 1661974 1661972 1661984 TAAAAATAGATGTAA TAAGGATAGTAGCAAT TTT ATTGCTACTATCCTTA TCTTTAGGAATTTAT TERM 1658 1662012 - 1661984 - g 100 -17.7 -3.73904 | opp_overlap 1661981 1661979 1661972 1661984 1662010, overlap 1661981 1661974 1661972 AAATAGATGTAATAA GGATAGTAGCAAT TTT ATTGCTACTATCC TTATCTTTAGGAATT TERM 1659 1661984 - 1662012 + G 100 -17.7 -3.82603 | opp_overlap 1661984 1661981 1661974 1661972, overlap 1661981 1661979 1661972 1662010 AAATAGATGTAATAA GGATAGTAGCAAT TTT ATTGCTACTATCC TTATCTTTAGGAATT Csac_1498 1661950 - 1663032 + | hypothetical protein TERM 1660 1663097 - 1663131 + T 79 -7.2 -4.39166 | opp_overlap 1663099, overlap 1663099 CTTTGTATTGCAAGA AAGGGGCTATCAAA TTATTTT TTTGACAGCCCCTG TTTTAATCTGTCCCC TERM 1661 1663129 - 1663099 - T 100 -12 -4.1822 | opp_overlap 1663097 1663099 TTGTATTGCAAGAAA GGGGCTATCAAA TTATTTT TTTGACAGCCCC TGTTTTAATCTGTCC TERM 1662 1663099 - 1663129 + T 83 -9.8 -3.79993 | opp_overlap 1663099, overlap 1663097 TTGTATTGCAAGAAA GGGGCTATCAAA TTATTTT TTTGACAGCCCC TGTTTTAATCTGTCC Csac_1499 1663764 - 1663159 - | NAD(P)H dehydrogenase (quinone) Csac_1500 1664943 - 1663849 - | iron-containing alcohol dehydrogenase Csac_1501 1665074 - 1665268 + | hypothetical protein TERM 1663 1665352 - 1665393 + F 100 -15.3 -5.4833 | AAGAGATGGGGAGAG GCCTGTGAACAGCTTCTTT AGAG GAAGGGGCTGTTTGCAGGC TTTTTTATTCACTAA Csac_1502 1665431 - 1666870 + | FAD dependent oxidoreductase Csac_1503 1666872 - 1668158 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Csac_1504 1668158 - 1668523 + | hypothetical protein Csac_1505 1669083 - 1668520 - | glycerol-3-phosphate responsive antiterminator TERM 1664 1670878 - 1670864 - g 85 -2.8 -5.94214 | AAGAGAATAAAAAAA TGGTTA GAA TTACCA CAAGGAATTTGGAGA TERM 1665 1671163 - 1671145 - g 80 -9 -3.90328 | opp_overlap 1671148, overlap 1671148 GAGAATTTTTATAAA GAATATGA CAT TCATATTC ATGTGCCAGAAGGTG Csac_1506 1669162 - 1671486 + | ATP-dependent protease La Csac_1507 1671506 - 1672120 + | small GTP-binding protein Csac_1508 1672117 - 1672533 + | hypothetical protein TERM 1666 1672826 - 1672838 + G 79 -3.3 -5.48825 | ATGGGACTTGTTGAA GCTGT AAT ACCGC TTTTTTTCAATAATA Csac_1509 1672559 - 1673434 + | helix-turn-helix domain-containing protein TERM 1667 1673439 - 1673461 + F 100 -9.2 -6.09133 | opp_overlap 1673439 CTAATACATAAAAAA GAAGTGCATT TAA ATTGCACTTC TTTTTTTTTAGAATG TERM 1668 1673461 - 1673439 - f 100 -9.2 -5.47431 | opp_overlap 1673439 CTAATACATAAAAAA GAAGTGCATT TAA ATTGCACTTC TTTTTTTTTAGAATG TERM 1669 1673540 - 1673550 + G 73 -6.8 -4.19817 | opp_overlap 1673540 1673539 AATGGCAGAACTAAG GTGG AAT CCAC TTTTACGTGACTGGG Csac_1510 1673526 - 1674512 + | galactose-1-phosphate uridylyltransferase Csac_1511 1674517 - 1675686 + | galactokinase TERM 1670 1676605 - 1676593 - g 79 -4.8 -5.1101 | opp_overlap 1676593 GCATCATCCAAAAAA GCAC AGGAA GTGC TTGGCTGGGAGCAAA Csac_1512 1675714 - 1676700 + | UDP-glucose 4-epimerase TERM 1671 1676722 - 1676751 + F 88 -3.5 -5.98675 | gap 1, overlap 1676720 1676723 AAAATTCAAGTACTT GCCCGAATGCAACT TAT AGA-GCGTTCGGGG TTTTTTGTTTTTGTA TERM 1672 1676723 - 1676750 + F 74 -7 -4.15545 | gap 1, overlap 1676720 1676722 AAATTCAAGTACTTG CCCGAATGCAACT TAT AGA-GCGTTCGGG GTTTTTTGTTTTTGT TERM 1673 1676923 - 1676907 - g 81 -3.8 -5.52096 | AAATGCAAGAAAAAA TTCTAA TATTG TTAGAA GGAGGGAAAAGAGTG TERM 1674 1678245 - 1678229 - g 83 -9.5 -3.86194 | AACGCTCTTCACAAA CCAAAGA AGT TCTTTGG TGCTGCACGAAACCT Csac_1513 1676894 - 1678606 + | transcription termination factor Rho TERM 1675 1678721 - 1678690 - f 100 -14.7 -3.92625 | opp_overlap 1678690 GAGATTTGAAGCAAA GTAGCTGCTTTTT TATTAC AAAAAGCAGCTAC TTTTTTTATTCTGAC TERM 1676 1678690 - 1678721 + F 100 -14.7 -5.88565 | opp_overlap 1678690 GAGATTTGAAGCAAA GTAGCTGCTTTTT TATTAC AAAAAGCAGCTAC TTTTTTTATTCTGAC TERM 1677 1678984 - 1678965 - g 71 -7.2 -3.89055 | opp_overlap 1678965 AGAGACTCTGATAAA CTTCCTTG GGGA CAAAGAAG TGTTCAAGAAGACCT Csac_1514 1678800 - 1679372 + | N-acetylmuramoyl-L-alanine amidase TERM 1678 1679427 - 1679401 - f 81 -4.4 -5.37865 | opp_overlap 1679403, overlap 1679403 CTAATAATTAAAAAA TAGAGCCAAAAA ACG TACTTGGCTCTT TTTGTTTTTAAATTT TERM 1679 1679403 - 1679425 + F 85 -4.9 -5.63236 | opp_overlap 1679403 1679401 AATAATTAAAAAATA GAGCCAA AAAACGTAC TTGGCTC TTTTTGTTTTTAAAT TERM 1680 1679425 - 1679403 - f 74 -7 -4.30543 | opp_overlap 1679403, overlap 1679401 AATAATTAAAAAATA GAGCCAAAAA ACG TACTTGGCTC TTTTTGTTTTTAAAT Csac_1515 1679462 - 1680322 + | 8-oxoguanine DNA glycosylase domain-containing protein TERM 1681 1680537 - 1680561 + G 78 -5.7 -4.95302 | overlap 1680541 TGATGGCATATGGGA GTATTTCTGCT TCA AGCAGAATTTC TTTTATTGTATTTGA TERM 1682 1680541 - 1680557 + G 100 -9.5 -4.94168 | overlap 1680537 GGCATATGGGAGTAT TTCTGCT TCA AGCAGAA TTTCTTTTATTGTAT Csac_1516 1680356 - 1681060 + | hypothetical protein Csac_1517 1681085 - 1682356 + | major facilitator transporter Csac_1518 1682421 - 1682621 + | hypothetical protein TERM 1683 1682707 - 1682678 - g 74 -4.5 -5.01042 | gap 1, opp_overlap 1682687, overlap 1682687 AACGCAAATGAAAAA GTTGAGAAGTTACA TTA TGTAATTTCT-AAC AATATACCATTTGGT Csac_1519 1682618 - 1683016 + | PilT domain-containing protein rpmE 1683175 - 1683384 + | 50S ribosomal protein L31 TERM 1684 1683428 - 1683409 - f 100 -10.8 -5.36441 | opp_overlap 1683409 GGCGCACATAAAAAA GGATTAGC CTGT GCTAATCC TTTTTGTTTTATAAA TERM 1685 1683409 - 1683428 + F 100 -10.8 -5.54907 | opp_overlap 1683409 GGCGCACATAAAAAA GGATTAGC CTGT GCTAATCC TTTTTGTTTTATAAA TERM 1686 1683957 - 1683999 + G 76 -9.4 -3.41073 | overlap 1683955 GTAATAGTCTTTATT CTCTATTTATTTTTTGCATC ACA GATGAAAGAAATAAAGAGGG TGTTTGAATACCATG TERM 1687 1684111 - 1684121 + G 70 -5.4 -4.36554 | ATCCTCGCTGCGGCA CAAG TTT CTTG TTTATTGTGATAATC Csac_1521 1683468 - 1684409 + | hypothetical protein Csac_1522 1684399 - 1685268 + | HemK family modification methylase TERM 1688 1685362 - 1685348 - g 78 -8.6 -3.68836 | overlap 1685346 AGCTTGAAAAGAAGA TCTCAG ATC CTGAGA TAATCAATAACAATC Csac_1523 1685293 - 1686360 + | peptide chain release factor 1 TERM 1689 1686956 - 1686975 + G 88 -7.8 -4.76123 | opp_overlap 1686954, overlap 1686963 AATCCTGACGAAGTT GCACCAGC AATA GCTGTTGC TTTTGTTGCTACTTT Csac_1524 1686422 - 1687219 + | MotA/TolQ/ExbB proton channel Csac_1525 1687225 - 1687998 + | OmpA/MotB domain-containing protein Csac_1526 1688050 - 1688808 + | zinc/iron permease Csac_1527 1688805 - 1689851 + | Sua5/YciO/YrdC/YwlC family protein TERM 1690 1689971 - 1689984 + G 73 -2.3 -5.40072 | ATTGAGGTTGAATCG GCGGG CTTG TCTGC TTTTTTTCCACAAAA Csac_1528 1689851 - 1690318 + | protein tyrosine phosphatase Csac_1529 1690315 - 1690779 + | hypothetical protein TERM 1691 1690807 - 1690782 - T 76 -9.8 -3.01184 | opp_overlap 1690780, overlap 1690781 1690784 ATACCATAAGTAAAG TAGGCTGCTC ATTTTA AAGCAGCCTA AACTATTTTGTCAGC TERM 1692 1690805 - 1690784 - T 70 -8 -3.05266 | opp_overlap 1690780, overlap 1690782 1690781 ACCATAAGTAAAGTA GGCTGCTC ATTTTA AAGCAGCC TAAACTATTTTGTCA Csac_1530 1691720 - 1690839 - | acetylglutamate kinase Csac_1531 1692782 - 1691751 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1693 1694419 - 1694393 - g 72 -7.5 -3.79113 | gap 1, opp_overlap 1694392 1694397 ATGGGTGTATAATAA CTATTGTAGTCA ATCC TGACTAC-ATAG CTTCAGTTACTAAAG TERM 1694 1694397 - 1694416 + G 71 -9.4 -2.57489 | opp_overlap 1694393, overlap 1694392 GTGTATAATAACTAT TGTAGTCA ATCC TGACTACA TAGCTTCAGTTACTA TERM 1695 1694473 - 1694453 - g 84 -9.9 -3.65068 | ATAAAAATATCATAA TTGGTTTTT CAC AAAAACCAA AGCCTAAAAATAAAC Csac_1532 1692943 - 1695066 + | cell wall hydrolase/autolysin Csac_1533 1695978 - 1695127 - | Cof-like hydrolase TERM 1696 1695606 - 1695596 - G 74 -4 -5.1361 | ACAAAGTTCAAAAAA TATG TAT CATA AGACTCTCTCAGTTT TERM 1697 1696038 - 1696016 - H 81 -4.3 -5.45652 | gap 1, opp_overlap 1696020, overlap 1696020 ATGTTGAACAAAAAA GAGATAGAAG CTTT CTTCTAT-TC TGAACTTTGTTAACA TERM 1698 1696433 - 1696446 + G 70 -5.3 -4.40181 | ACCTCATAAGCCTTC TTGCA GCTC TGCAA TTTGTTCTGATGTTT Csac_1534 1696090 - 1698063 + | NADH dehydrogenase (quinone) Csac_1535 1698060 - 1698920 + | respiratory-chain NADH dehydrogenase, subunit 1 TERM 1699 1699194 - 1699169 - g 75 -9.7 -2.85874 | overlap 1699164 1699184 ATATATACGATCAGA TGCCACACCCG AAAG CAGTTGTGGCA ATTGGAGCTTGTGCG Csac_1536 1698943 - 1699407 + | NADH ubiquinone oxidoreductase, 20 kDa subunit Csac_1537 1699391 - 1699762 + | NADH dehydrogenase (ubiquinone), 30 kDa subunit Csac_1538 1699770 - 1700849 + | NADH-ubiquinone oxidoreductase, chain 49kDa Csac_1539 1700877 - 1701260 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Csac_1540 1701281 - 1701634 + | hydrogenase nickel insertion protein HypA Csac_1541 1701618 - 1702289 + | hydrogenase accessory protein HypB TERM 1700 1702360 - 1702342 - g 78 -10.2 -3.29263 | opp_overlap 1702343, overlap 1702343 AGAGGGCTTGTACAA GGGGTCGG TTT CCGACCCT TTATTTATAACCTGG TERM 1701 1702359 - 1702343 - g 91 -13.7 -2.57344 | opp_overlap 1702343, overlap 1702342 GAGGGCTTGTACAAG GGGTCGG TTT CCGACCC TTTATTTATAACCTG TERM 1702 1702343 - 1702359 + G 100 -13.7 -4.56367 | opp_overlap 1702342 1702343 GAGGGCTTGTACAAG GGGTCGG TTT CCGACCC TTTATTTATAACCTG TERM 1703 1703974 - 1703964 - g 76 -2.4 -5.52096 | opp_overlap 1703964 AAAGGCAATAAAAAA GCCG GTC CGTC TTGCATACTATTTTT Csac_1542 1702297 - 1704570 + | (NiFe) hydrogenase maturation protein HypF Csac_1543 1704586 - 1704810 + | hydrogenase assembly chaperone hypC/hupF TERM 1704 1704860 - 1704846 - g 70 -2.8 -5.17054 | ACAATATCGAAAAAA TTGGAC GGA GTCTAA AAATCATTGAAGTGT TERM 1705 1704948 - 1704965 + G 81 -8.4 -4.19624 | ACATCGACTTTATTT CAGGGC CGGGCT GCCCTG TTTGTGTTACGCATG Csac_1544 1704797 - 1705843 + | hydrogenase formation HypD protein Csac_1545 1705828 - 1706838 + | hydrogenase expression/formation protein HypE Csac_1546 1706881 - 1707084 + | hypothetical protein Csac_1547 1707132 - 1707569 + | hypothetical protein Csac_1548 1707595 - 1707798 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Csac_1549 1707802 - 1708854 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Csac_1550 1708929 - 1709630 + | thiamine pyrophosphate binding domain-containing protein TERM 1706 1709770 - 1709786 + G 84 -10.9 -3.47078 | TGAAATGAGAGGTGG CACTGCA AAC TGCAGTG TTATAATATCAAATG Csac_1551 1709633 - 1710172 + | pyruvate ferredoxin/flavodoxin oxidoreductase Csac_1552 1710180 - 1711556 + | VanW family protein Csac_1553 1711571 - 1712236 + | hypothetical protein Csac_1554 1712308 - 1712907 + | hypothetical protein TERM 1707 1712941 - 1712968 + T 100 -15 -4.68724 | opp_overlap 1712946, overlap 1712946 AAAAGCTTGAGAGCT CGAAAGAGGGGA ACAT TCCCCTCTTTTG TTTTATCTTAAATCA TERM 1708 1712946 - 1712963 + T 100 -11.3 -5.26907 | opp_overlap 1712946, overlap 1712941 CTTGAGAGCTCGAAA GAGGGGA ACAT TCCCCTC TTTTGTTTTATCTTA TERM 1709 1712963 - 1712946 - T 93 -11.3 -3.59262 | opp_overlap 1712946 1712941 CTTGAGAGCTCGAAA GAGGGGA ACAT TCCCCTC TTTTGTTTTATCTTA TERM 1710 1713015 - 1712994 - T 73 -8.1 -3.43104 | opp_overlap 1712999 1713002, overlap 1712989 AATCAGGCAAGAAGA CTCCATCTT CTAC AAAATGGAG ATGAATTGTTACAAA TERM 1711 1713096 - 1713082 - T 76 -7.2 -4.27033 | CAAAACACAGATAAA TCACAT AAG ATGTGA TAAGCAAACATACAA TERM 1712 1713697 - 1713718 + T 74 -9.5 -2.62792 | overlap 1713696 TTGATACCATTGGGA CTGCCTTTT TGAT AGAAGGCAG GTATTTAAAATCAGT TERM 1713 1714305 - 1714327 + T 77 -8.5 -3.65581 | gap 1, opp_overlap 1714304, overlap 1714307 AAACTTCTCACGAAG CC-TCCACCT CTTT AGGTGGATGG TTGTTCACACTTCCT TERM 1714 1714307 - 1714324 + T 79 -9.9 -2.93817 | opp_overlap 1714304, overlap 1714305 ACTTCTCACGAAGCC TCCACCT CTTT AGGTGGA TGGTTGTTCACACTT Csac_1556 1715246 - 1714332 - | regulatory protein, ArsR TERM 1715 1715385 - 1715374 - H 77 -3 -5.56372 | AAACTAAAATAAAAA CTTT GAAT AAAG CAAAAATGTGTTAAT TERM 1716 1715746 - 1715721 - g 76 -4.7 -4.89852 | overlap 1715724 GGAGAGGTACAAAAA CATTACAGTTG ATTA CATCTGTACTG CTCCAGGGCAAGAAT Csac_1557 1715521 - 1716870 + | extracellular solute-binding protein TERM 1717 1717241 - 1717256 + G 70 -3.2 -4.93318 | TTTTTACATGGTGGG CATACC TATA GGAATG TTTTTGTCAATTATA Csac_1558 1717005 - 1717892 + | binding-protein-dependent transport systems inner membrane component Csac_1559 1717923 - 1718777 + | binding-protein-dependent transport systems inner membrane component TERM 1718 1718828 - 1718811 - g 73 -7.1 -4.11216 | GTGTGATGGGTAAAA TCAGTTT TCGA AAACTGA AACTATTTATTTTGG Csac_1560 1718801 - 1720267 + | glycoside hydrolase family protein Csac_1561 1720385 - 1721902 + | Alpha-N-arabinofuranosidase TERM 1719 1721921 - 1721963 + F 100 -14.5 -4.77775 | opp_overlap 1721903 1721924, overlap 1721903 TTTCGCTTAAGGAGG CAAGACAGCTTCTTAAG AAGTATAAA TTTAAGAAGCTGTCTTG TTTATTTTATAAAAT TERM 1720 1721960 - 1721924 - f 76 -9.7 -3.13164 | opp_overlap 1721903 1721921, overlap 1721903 CGCTTAAGGAGGCAA GACAGCTTCTTAA GAAGTATAAAT TTAAGAAGCTGTC TTGTTTATTTTATAA Csac_1562 1722070 - 1723386 + | glycoside hydrolase family protein Csac_1563 1723961 - 1723479 - | GCN5-related N-acetyltransferase Csac_1564 1724120 - 1724620 + | crossover junction endodeoxyribonuclease RuvC Csac_1565 1724617 - 1725210 + | Holliday junction DNA helicase RuvA ruvB 1725243 - 1726259 + | Holliday junction DNA helicase B Csac_1567 1726268 - 1726792 + | hypothetical protein Csac_1568 1726961 - 1727272 + | ribosomal protein L21 Csac_1569 1727292 - 1727633 + | hypothetical protein rpmA 1727617 - 1727916 + | 50S ribosomal protein L27 TERM 1721 1727948 - 1727976 + F 81 -3.2 -5.82281 | overlap 1727958 AACGCTTTTCAAAAA GAGGCAAACT GACAAAAGA GGTTTGTCTC TTTTTTTGTATCTTT obgE 1727982 - 1729304 + | GTPase ObgE Csac_1572 1730420 - 1729317 - | hypothetical protein TERM 1722 1730432 - 1730446 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT TERM 1723 1730918 - 1730885 - H 95 -5.2 -6.20267 | opp_overlap 1730888, overlap 1730886 1730887 CTAAAAATAAAAAAA TGCCGGCAGAAAGG CAAAAT CCTTTCTGCCGTTT TAGTTTATAAATAGC TERM 1724 1730917 - 1730886 - H 87 -8.7 -4.285 | opp_overlap 1730888, overlap 1730885 1730887 TAAAAATAAAAAAAT GCCGGCAGAAAGG CAAAAT CCTTTCTGCCGTT TTAGTTTATAAATAG TERM 1725 1730916 - 1730887 - H 90 -12.2 -3.1344 | opp_overlap 1730888, overlap 1730886 1730885 AAAAATAAAAAAATG CCGGCAGAAAGG CAAAAT CCTTTCTGCCGT TTTAGTTTATAAATA TERM 1726 1730888 - 1730915 + H 100 -15.7 -4.62475 | opp_overlap 1730887 1730886 1730885 AAAATAAAAAAATGC CGGCAGAAAGG CAAAAT CCTTTCTGCCG TTTTAGTTTATAAAT Csac_1573 1730986 - 1731273 + | hypothetical protein TERM 1727 1731486 - 1731518 + F 95 -5.6 -5.9362 | opp_overlap 1731453, overlap 1731482 1731488 AGAAGATTTAGGAAG AAGTCTTCTTGTAG CTTAT CTGCAGGAAGGCTA TTTTTTTATCTTTTA TERM 1728 1731488 - 1731516 + F 85 -8.2 -4.5577 | opp_overlap 1731453, overlap 1731482 1731486 AAGATTTAGGAAGAA GTCTTCTTGTAG CTTAT CTGCAGGAAGGC TATTTTTTTATCTTT Csac_1574 1731574 - 1732848 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Csac_1575 1732977 - 1734122 + | homoserine O-acetyltransferase Csac_1576 1734119 - 1734841 + | beta-lactamase domain-containing protein Csac_1577 1734874 - 1735764 + | peptidase M19, renal dipeptidase TERM 1729 1736194 - 1736209 + G 88 -3.3 -5.92337 | opp_overlap 1736194, overlap 1736181 TCGAATGGTGCAAAG CATTC TCTGAT GAATG TTTTTTTTGCTCTCT TERM 1730 1736304 - 1736290 - g 70 -5.7 -4.41548 | CCAGAGCTTATAAAA CTTGC AGGTG GCAAG GTCGTAGTTGTACCA Csac_1578 1735894 - 1737087 + | aminotransferase, class I and II TERM 1731 1737784 - 1737768 - g 71 -5.1 -4.71426 | TGGTGATGAAGAAAA GGTTAAG AAG CTTGACC AGCTTGTTTGTCAAA Csac_1579 1737139 - 1738569 + | adenylosuccinate lyase TERM 1732 1738569 - 1738619 + T 100 -12.9 -5.47159 | opp_overlap 1738577, overlap 1738577 AGAGGTAAATTTATA GAAAAAAATAGAAAGGGACTG TTTATTTTC CAGTCCCTTTCTATTAATTTC TTTTTTGTATTACAA TERM 1733 1738577 - 1738611 + T 100 -13.1 -3.90489 | opp_overlap 1738577, overlap 1738569 ATTTATAGAAAAAAA TAGAAAGGGACTG TTTATTTTC CAGTCCCTTTCTA TTAATTTCTTTTTTG TERM 1734 1738611 - 1738577 - T 100 -13.1 -5.72616 | opp_overlap 1738569 1738577 ATTTATAGAAAAAAA TAGAAAGGGACTG TTTATTTTC CAGTCCCTTTCTA TTAATTTCTTTTTTG Csac_1580 1742028 - 1738663 - | reverse gyrase TERM 1735 1740106 - 1740094 - G 72 -7.7 -3.80014 | opp_overlap 1740094 1740093 ATACTCATCAGTAAA CTGTG TAC CACAG CTTGTACAGCGTTTG Csac_1581 1742632 - 1742165 - | amino acid-binding ACT domain-containing protein Csac_1582 1743403 - 1742645 - | dihydrodipicolinate reductase Csac_1583 1744346 - 1743459 - | dihydrodipicolinate synthase Csac_1584 1745403 - 1744402 - | aspartate-semialdehyde dehydrogenase TERM 1736 1744865 - 1744875 + g 70 -6.8 -4.16921 | TATGGAAATTTCTTT GGTG GAG CACC TTTTAAACCTTCTTC TERM 1737 1745490 - 1745474 - H 90 -5.1 -5.81622 | opp_overlap 1745474, overlap 1745466 ATAAAACTAAAAAAA GCTGG TCTTCAG CCAGC TTCTGTTAATATATT Csac_1585 1745889 - 1746287 + | HI0074 family nucleotidyltransferase substrate binding protein Csac_1586 1746284 - 1746583 + | DNA polymerase beta subunit Csac_1587 1746590 - 1747063 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Csac_1588 1747148 - 1748320 + | hypothetical protein Csac_1589 1748340 - 1748924 + | hypothetical protein Csac_1590 1748944 - 1750611 + | hypothetical protein TERM 1738 1751594 - 1751577 - g 73 -2 -5.29742 | AGACAAAAAAATAAA GAGCTT AGAAGA AAACTC ATCTGCAAACGTGAA Csac_1591 1750642 - 1751901 + | nuclease SbcCD, D subunit TERM 1739 1753059 - 1753038 - g 76 -4.5 -5.17054 | AGAAGAGCTAAAAAA GTCAGAAAT TGAG ATTTCCAAC GTTGAGAAAGAGCTT Csac_1592 1751923 - 1754496 + | SMC domain-containing protein Csac_1593 1754550 - 1754891 + | hypothetical protein Csac_1594 1754909 - 1755508 + | recombination protein RecR Csac_1595 1755575 - 1755826 + | hypothetical protein TERM 1740 1755838 - 1755814 - T 91 -7.2 -5.243 | opp_overlap 1755814 TAAACTACTAAAAAA GAACCCTC AGTAAAAAA GAGGGTTC TTTTTATTTTTGGTT TERM 1741 1755814 - 1755838 + T 100 -7.2 -5.67529 | opp_overlap 1755814 TAAACTACTAAAAAA GAACCCTC AGTAAAAAA GAGGGTTC TTTTTATTTTTGGTT Csac_1596 1756624 - 1756034 - | hypothetical protein TERM 1742 1756302 - 1756337 + g 71 -4.8 -4.56597 | ACTACATTCAGCCAG TGTGTTTTAAGAAGAC CTTT GTCATTTAAAGACACA TTTTTAGAGGCAAGG TERM 1743 1756900 - 1756880 - g 70 -5.5 -4.42081 | overlap 1756873 AATATAAATCCAAAA GCCAAATTT TAT AAACTTGAC ATTCGAGATAACTTA Csac_1597 1756748 - 1757665 + | NAD-dependent epimerase/dehydratase Csac_1598 1757738 - 1758055 + | hypothetical protein Csac_1599 1758137 - 1758439 + | hypothetical protein TERM 1744 1758449 - 1758484 + F 100 -9.9 -5.58454 | opp_overlap 1758449 GAATAAGTAGAAAAA TAAAGCACGGCCA ATTTATTTTA TGGTCGTGCTTTA TTTTTTTGCTGTAAA TERM 1745 1758484 - 1758449 - f 89 -7.7 -5.03945 | opp_overlap 1758449 GAATAAGTAGAAAAA TAAAGCACGGCCA ATTTATTTTA TGGTCGTGCTTTA TTTTTTTGCTGTAAA Csac_1600 1758573 - 1759481 + | UTP-glucose-1-phosphate uridylyltransferase GalU TERM 1746 1759495 - 1759513 + F 100 -11.8 -5.64873 | overlap 1759503 AAAACCTTTTTCCTG GCCACTTT CAA AAAGTGGC TTTTTTGTTATTGAA TERM 1747 1759597 - 1759566 - f 74 -7.6 -3.80174 | overlap 1759573 ATATTGGCATAAGAA TTTAATACCTGATA TTAA TATCAAATATTAAA TCATGGTGATAAAAA TERM 1748 1759687 - 1759673 - g 84 -5 -5.40279 | GAAAATAAAAGAAAA TCCGTT TAT AACAGA TGAGGAACTTGCAGA TERM 1749 1760050 - 1760026 - g 81 -7.1 -4.57209 | opp_overlap 1760027, overlap 1760027 1760045 ATATCAAGTACAAAA CGCCTGTCTTT GCA AATGACAGGCT TGTTGCCAGGGCTGA TERM 1750 1760049 - 1760027 - g 80 -10.6 -3.33241 | opp_overlap 1760027, overlap 1760026 1760045 TATCAAGTACAAAAC GCCTGTCTTT GCA AATGACAGGC TTGTTGCCAGGGCTG TERM 1751 1760027 - 1760049 + G 82 -10.6 -3.61715 | opp_overlap 1760027 1760026 1760045 TATCAAGTACAAAAC GCCTGTCTTT GCA AATGACAGGC TTGTTGCCAGGGCTG Csac_1601 1759614 - 1760201 + | fatty acid biosynthesis transcriptional regulator TERM 1752 1760465 - 1760444 - g 83 -2.3 -5.87688 | gap 1, overlap 1760448 ATAAGGCAAAAAAAA GACTCATCAA TTG TTGTTG-GTC TGAAATACTTAAAAG Csac_1602 1760207 - 1761211 + | fatty acid/phospholipid synthesis protein PlsX TERM 1753 1761852 - 1761840 - g 70 -2.7 -5.11836 | ACAGGTAAAAGAAAA TCCAA ACT TTAGA AAAATCTATATGGAG TERM 1754 1761947 - 1761961 + G 79 -5 -5.15167 | AGGTGGGACTTTCTT CATCTG ATA TAGATG TTTTTATTCCTCATC Csac_1603 1761214 - 1762200 + | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 1755 1762248 - 1762264 + G 73 -6.5 -4.1822 | TTGCGGTAATGTTTC CTGGGCA AGG TGCGCAG TTTGTTGGAATGGGA Csac_1604 1762223 - 1763134 + | malonyl CoA-acyl carrier protein transacylase Csac_1605 1763174 - 1763920 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 1756 1763966 - 1763952 - f 76 -7.2 -4.15833 | opp_overlap 1763951 AGCATTATTTTAAAA TCCAAA ATT TTTGGA GGTGTTTTTTGTGAA Csac_1606 1763977 - 1764213 + | acyl carrier protein TERM 1757 1764263 - 1764218 - f 72 -5.7 -4.49316 | gap 1, opp_overlap 1764221, overlap 1764219 1764221 1764222 AGCATCAATAAGAAA GTACTT-ACCCCTGCTTT AGATACCTAAA AAAGCAGGGGTAAAGTAT TCAACTTTAAAACTT TERM 1758 1764262 - 1764219 - f 77 -9.2 -3.28505 | gap 1, opp_overlap 1764221, overlap 1764218 1764221 1764222 GCATCAATAAGAAAG TACTT-ACCCCTGCTTT AGATACCTAAA AAAGCAGGGGTAAAGTA TTCAACTTTAAAACT TERM 1759 1764259 - 1764221 - f 78 -9.8 -3.19657 | opp_overlap 1764221, overlap 1764219 1764218 1764222 ATCAATAAGAAAGTA CTTACCCCTGCTTT AGATACCTAAA AAAGCAGGGGTAAA GTATTCAACTTTAAA TERM 1760 1764258 - 1764222 - f 82 -11.1 -2.5071 | opp_overlap 1764221, overlap 1764221 1764219 1764218 TCAATAAGAAAGTAC TTACCCCTGCTTT AGATACCTAAA AAAGCAGGGGTAA AGTATTCAACTTTAA Csac_1607 1764388 - 1765533 + | beta-ketoacyl synthase Csac_1608 1765645 - 1766319 + | ribonuclease III TERM 1761 1766557 - 1766538 - g 80 -6.5 -4.79667 | opp_overlap 1766538 1766546 AAAATGCAGCAAAAA CTTCTTG AGCTTG CAAGAAG CTTTGAAAATATAAA Csac_1609 1766316 - 1767341 + | radical SAM domain-containing protein TERM 1762 1768212 - 1768196 - g 76 -8 -4.06687 | ATTCTTGACAAAGAA CAAGCC AACAG GGCTTG TAAAAGACTTTATTG Csac_1610 1767474 - 1768292 + | phosphate binding protein TERM 1763 1768604 - 1768619 + G 76 -6.2 -4.57341 | AGGAGTTCCTATTGG TATTGC AACT GCAATA TTTTTGGGCGAGCTT Csac_1611 1768356 - 1769210 + | phosphate ABC transporter, inner membrane subunit PstC TERM 1764 1769226 - 1769240 + G 72 -3.6 -4.90906 | TAAAGAAAAATAAAA TAATAC AGG GTATTG TTTTTACTATTATAG Csac_1612 1769207 - 1770046 + | phosphate ABC transporter, inner membrane subunit PstA Csac_1613 1770159 - 1770419 + | stage V sporulation protein S TERM 1765 1770442 - 1770464 + T 100 -9.2 -6.11392 | opp_overlap 1770441 GACTTTTTAAAGTAG GCAGGTAG AAAAAAA CTACCTGC TTTTTTTGTTTGTTT Csac_1614 1771696 - 1770593 - | hypothetical protein TERM 1766 1771708 - 1771722 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT Csac_1615 1772013 - 1772600 + | metal dependent phosphohydrolase TERM 1767 1774061 - 1774074 + G 74 -8.1 -3.70068 | overlap 1774063 AAGCGGCACAGGCTA TGGGG GCTT CCCCA TTTCAAATTGTAATA Csac_1617 1773688 - 1774341 + | binding-protein-dependent transport systems inner membrane component TERM 1768 1774533 - 1774523 - g 73 -5.4 -4.65512 | overlap 1774525 AAAATAACCATAAAA GTTG GTG CAAC ACCCGTGCCTCATGC TERM 1769 1774902 - 1774892 - g 71 -4.6 -4.78029 | overlap 1774887 TTAATAAAACTAAAA CCGA ATG CCGG TATTAAAGCCAAAGT Csac_1618 1774376 - 1775227 + | NLPA lipoprotein TERM 1770 1775313 - 1775335 + F 89 -10.6 -3.89336 | overlap 1775323 TTCATCAAGAGTTGG GGTGGGTGTT CTG AATGCCCACC TTTCAGTTTAATTAA TERM 1771 1777143 - 1777124 - g 70 -3 -5.20781 | gap 1, opp_overlap 1777125, overlap 1777126 GAGTACAAAATAAAA TA-TGGTAT GCG ATACCAATA TAGTTTAGAAAAAGA TERM 1772 1777140 - 1777126 - g 75 -7.2 -4.21317 | opp_overlap 1777125, overlap 1777124 GTACAAAATAAAATA TGGTAT GCG ATACCA ATATAGTTTAGAAAA Csac_1620 1776524 - 1777219 + | hypothetical protein TERM 1773 1777258 - 1777288 + F 91 -8.3 -5.08367 | ATCCAAAAATTATGA GGGGCTGTTCAAT AAACA AATGGACAGCCTC TTTTTAATTTGTATT TERM 1774 1780215 - 1780196 - g 77 -2.9 -5.55698 | CATAATTGAAAAAAA CAACTTG GAAAAT CAAATTG GGACCATAAAAGAAA Csac_1621 1777407 - 1780940 + | chromosome segregation protein SMC Csac_1622 1780947 - 1781849 + | signal recognition particle-docking protein FtsY Csac_1623 1782592 - 1781912 - | cyclic nucleotide-binding protein TERM 1775 1782079 - 1782093 + g 77 -2.8 -5.54079 | overlap 1782064 GCTTTGAAAGAGAAA GCTTTA TCT TGAGGC TTTTTTGCTTTTTGA TERM 1776 1782217 - 1782235 + g 83 -6 -5.2112 | ATATATTTAGATAGT TGTGCAAG AAC CTTTCACA TTTTTTGCTCATATT TERM 1777 1783017 - 1783001 - g 84 -5.1 -5.28778 | ATTATTGAGAAAAAA GAAGCTG CTG CACCTTC GGAAGCTAAACCTTC TERM 1778 1783409 - 1783393 - g 78 -10.9 -2.59564 | overlap 1783392 1783395 TTCTGAGGTTACAAT TACCACC GAA GGTGGTA TAAAAGAATAAATTT Csac_1624 1782698 - 1783420 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1779 1783407 - 1783395 - f 73 -9.1 -2.83822 | overlap 1783393 1783392 CTGAGGTTACAATTA CCACC GAA GGTGG TATAAAAGAATAAAT Csac_1625 1783468 - 1785117 + | hydroxylamine reductase TERM 1780 1785187 - 1785141 - f 83 -6.7 -4.93318 | opp_overlap 1785148, overlap 1785121 1785120 1785143 1785148 TAGAATTTACAAAAA CCTAAAATAGTGCTGCCCAAA AGTTG TTTGGGTAGCACTATTTTTTT GGTTGAACAATGAAA TERM 1781 1785185 - 1785143 - f 100 -13.7 -2.71859 | opp_overlap 1785148, overlap 1785121 1785120 1785141 1785148 GAATTTACAAAAACC TAAAATAGTGCTGCCCAAA AGTTG TTTGGGTAGCACTATTTTT TTGGTTGAACAATGA TERM 1782 1785180 - 1785148 - f 100 -13.6 -4.5115 | opp_overlap 1785148, overlap 1785121 1785120 1785143 1785141 TACAAAAACCTAAAA TAGTGCTGCCCAAA AGTTG TTTGGGTAGCACTA TTTTTTTGGTTGAAC TERM 1783 1785148 - 1785180 + F 100 -15.8 -5.63103 | opp_overlap 1785121 1785120 1785143 1785141 1785148 TACAAAAACCTAAAA TAGTGCTGCCCAAA AGTTG TTTGGGTAGCACTA TTTTTTTGGTTGAAC TERM 1784 1785232 - 1785212 - f 100 -6.3 -5.77571 | ATGAAAAAATAAAAA TGTAAACTT GCA AAATTTACA GGTTGGTTGTCCAGA Csac_1626 1785344 - 1785727 + | hypothetical protein TERM 1785 1785783 - 1785732 - f 86 -5.7 -5.37593 | opp_overlap 1785730 1785732 1785779, overlap 1785750 1785778 GTCTAAAGTAAAAAA TTGGCAGACCAAGCAAAGGGCCA GAAAAA TGGCCAGTTGCAAGGTAGGCCAA TATTTGCAAGGCAAG TERM 1786 1785818 - 1785778 - f 100 -14.2 -2.53263 | opp_overlap 1785732 1785730 1785779, overlap 1785732 1785786 GCCAGTTGCAAGGTA GGCCAATATTTGCAAGGC AAGAA GCTTTGCAAATATTGGCT TTTTTTGTTGTTGTG TERM 1787 1785779 - 1785817 + F 100 -19.9 -5.97979 | opp_overlap 1785732 1785778 1785786, overlap 1785732 1785730 CCAGTTGCAAGGTAG GCCAATATTTGCAAGGC AAGAA GCTTTGCAAATATTGGC TTTTTTTGTTGTTGT TERM 1788 1786140 - 1786130 - g 78 -4 -5.30448 | opp_overlap 1786130 AAACAAAGACAAAAA CTTT CTC AAAG ATTTAAAGGTTGTTG Csac_1627 1785870 - 1786295 + | hypothetical protein TERM 1789 1788003 - 1788027 + G 75 -9.3 -3.14211 | ATTCCGAAGTTTTTG CTTCAGGTTGA TCT TCAGCCAGAAG TTGGTGAAGAAGGAT Csac_1628 1786323 - 1788191 + | hypothetical protein TERM 1790 1788228 - 1788280 + F 100 -16.7 -5.03747 | opp_overlap 1788225 ATACTTTCAAACTGT TGACCTCCTCATAGAATTGAAGATA AAA TATTCTTAATTCTATGAGGAGATCA TTTTTTGAAAGCTTT TERM 1791 1788947 - 1788928 - g 83 -2.1 -5.80003 | opp_overlap 1788928 GCAAGAAATAAAAAA GGAGATG TTGTTT CATATCC TGTTGTAGAAATGGT TERM 1792 1789233 - 1789249 + G 71 -5.1 -4.58424 | overlap 1789234 CATTTGTGATTTGCC ACTTGGT TCT ACCAAGC TTTTGTCTCCTGCTG TERM 1793 1789234 - 1789248 + G 73 -8.6 -3.34332 | overlap 1789233 ATTTGTGATTTGCCA CTTGGT TCT ACCAAG CTTTTGTCTCCTGCT TERM 1794 1789331 - 1789348 + G 78 -6.3 -4.73092 | AGGGGTTGATTGATG CACTTTC AATA GAAGGTG TTTCTTTTCACTTCT Csac_1629 1788337 - 1789491 + | phosphoribosylaminoimidazole carboxylase ATPase subunit Csac_1630 1789495 - 1790025 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Csac_1631 1790440 - 1791468 + | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 1795 1792127 - 1792112 - g 74 -4.8 -4.78764 | CAAACCCAGGAAAAA TCAAAA AGGT TTTTGA AATAAGACTTGCAAG Csac_1632 1791472 - 1792311 + | ABC transporter related Csac_1633 1792301 - 1793017 + | binding-protein-dependent transport systems inner membrane component Csac_1634 1793044 - 1793253 + | thiamine biosynthesis protein ThiS TERM 1796 1793354 - 1793390 + G 84 -7.9 -4.58395 | ATCTAAGGTTTTGAT CATTGGGACTGGGGGAC TTG GTTCCCCTGCTGCAATG TTTTTGGCAGCTGCC Csac_1635 1793250 - 1794062 + | UBA/THIF-type NAD/FAD binding protein Csac_1636 1794114 - 1794524 + | Mov34/MPN/PAD-1 family protein Csac_1637 1794587 - 1795435 + | nitrite and sulphite reductase 4Fe-4S region TERM 1797 1795436 - 1795449 + G 88 -5.3 -5.52909 | GATTTTAATGAGTGA CATCA AAGC TGATG TTTTTTTGGATATTA Csac_1638 1795428 - 1795676 + | SirA family protein TERM 1798 1795802 - 1795818 + G 76 -5.8 -4.60797 | overlap 1795803 CTGGAAGAAGTTTTT TCTGGC AAAAA GCCAGG TTTTGTATATACAAG Csac_1639 1795673 - 1796902 + | O-acetylhomoserine aminocarboxypropyltransferase Csac_1640 1796945 - 1798636 + | adenylylsulfate reductase Csac_1641 1798620 - 1798937 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1799 1799594 - 1799608 + G 71 -8.6 -3.19522 | opp_overlap 1799576 TACAGAAGCCTTGGT TGTGCA CCG TGCACA TTCCCTGTTGAGTCA Csac_1642 1798952 - 1799752 + | sulfate adenylyltransferase subunit 2 TERM 1800 1800554 - 1800541 - g 73 -2.4 -5.35815 | GAGACGAAATAAAAA TCCT GCCAGA AGGA AAGGTTAGCAAAGTA TERM 1801 1800951 - 1800965 + G 75 -5.7 -4.72007 | opp_overlap 1800950 1800951 GAATTTAAAGTAAAT CCTAC AACAG GTAGG TTTGTTTTAGTAGAC Csac_1643 1799781 - 1801475 + | sulfate adenylyltransferase, large subunit Csac_1644 1802422 - 1801538 - | LysR family transcriptional regulator Csac_1645 1802840 - 1803673 + | nitrite and sulphite reductase 4Fe-4S region Csac_1646 1803850 - 1804236 + | hypothetical protein Csac_1647 1804282 - 1805043 + | TatD-related deoxyribonuclease Csac_1648 1805089 - 1805415 + | hypothetical protein TERM 1802 1806065 - 1806045 - g 76 -7.7 -4.11692 | GAGGTAGCCTTAAAA TGTTCAAAA GAA TTTCGAACA AAAGCAAGGTTAAAC hemA 1805634 - 1806818 + | glutamyl-tRNA reductase Csac_1650 1806839 - 1807435 + | precorrin-2 dehydrogenase Csac_1651 1807455 - 1808327 + | porphobilinogen deaminase TERM 1803 1808788 - 1808804 + G 88 -10.9 -3.72576 | CGTATAGAAAGCTTG CACGTGA ATT TCACGTG TTTACTGGGCACACG Csac_1652 1808376 - 1809851 + | uroporphyrin-III C-methyltransferase Csac_1653 1809841 - 1810818 + | delta-aminolevulinic acid dehydratase Csac_1654 1810821 - 1812104 + | glutamate-1-semialdehyde-2,1-aminomutase TERM 1804 1812288 - 1812270 - g 73 -5.4 -4.62102 | overlap 1812272 1812279 AGAAAAATATGAAAA TCTCAAAA GTT TTTTGAAA AGCTTAGGAAGTGTT Csac_1655 1812226 - 1813083 + | ExsB family protein Csac_1656 1813086 - 1813481 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1805 1813602 - 1813582 - f 71 -8.3 -3.36671 | opp_overlap 1813591, overlap 1813584 AGTTCAATGGTAGAA CACCAGCCT TCC AAGCTGGTA GCGTGGGTTCGATTC TERM 1806 1813600 - 1813584 - f 74 -8.7 -3.25192 | opp_overlap 1813591, overlap 1813582 TTCAATGGTAGAACA CCAGCCT TCC AAGCTGG TAGCGTGGGTTCGAT TERM 1807 1813682 - 1813643 - f 76 -6.4 -4.62441 | opp_overlap 1813649, overlap 1813644 1813646 1813648 CTCCAGATAAAGAAA GCATATCCCTCAATGGCT AAAG AGCCATTGAGGGTTTTTT GTTTTGCATTTATAA TERM 1808 1813681 - 1813644 - f 82 -9.9 -3.36742 | opp_overlap 1813649, overlap 1813643 1813646 1813648 TCCAGATAAAGAAAG CATATCCCTCAATGGCT AAAG AGCCATTGAGGGTTTTT TGTTTTGCATTTATA TERM 1809 1813679 - 1813646 - f 90 -12.5 -3.24105 | opp_overlap 1813649, overlap 1813644 1813643 1813648 CAGATAAAGAAAGCA TATCCCTCAATGGCT AAAG AGCCATTGAGGGTTT TTTGTTTTGCATTTA TERM 1810 1813677 - 1813648 - f 100 -15.1 -3.16414 | opp_overlap 1813649, overlap 1813646 1813644 1813643 GATAAAGAAAGCATA TCCCTCAATGGCT AAAG AGCCATTGAGGGT TTTTTGTTTTGCATT TERM 1811 1813649 - 1813676 + F 100 -18.6 -5.80951 | opp_overlap 1813648 1813646 1813644 1813643 ATAAAGAAAGCATAT CCCTCAATGGCT AAAG AGCCATTGAGGG TTTTTTGTTTTGCAT Csac_1657 1813803 - 1814132 + | anti-sigma-factor antagonist Csac_1658 1814168 - 1814650 + | anti-sigma F factor Csac_1659 1814640 - 1815335 + | FliA/WhiG family RNA polymerase sigma factor TERM 1812 1815356 - 1815381 + F 100 -7.6 -5.61277 | ATAAAATTTCAGTTT GACACGCAGT CGGAAA AATGCGTGTC TTTTATTTTTTTATA Csac_1660 1815463 - 1816161 + | phosphoribosyltransferase TERM 1813 1816355 - 1816341 - g 77 -10 -3.17194 | AGGTGTCTAATGCAA CAGGTG TGT CACCTG AGAAGATTTTAAGAT Csac_1661 1816181 - 1816621 + | hypothetical protein Csac_1662 1816697 - 1816984 + | anti-sigma-28 factor, FlgM Csac_1663 1817059 - 1817556 + | hypothetical protein TERM 1814 1818398 - 1818384 - g 71 -8.6 -3.16055 | CAAATGGTCTACCAA CAGGAT TCA ATCCTG ACGACCCGCTTTCAC flgK 1817579 - 1819156 + | flagellar hook-associated protein FlgK TERM 1815 1819345 - 1819321 - g 73 -9.3 -2.82015 | opp_overlap 1819324 TCGATACCCATCAGA TGACCCTGTAG TTA CTGCAAGGTCA TTGAGACTGCGAACT flgL 1819199 - 1820146 + | flagellar hook-associated protein FlgL Csac_1666 1820184 - 1820561 + | hypothetical protein Csac_1667 1820561 - 1821001 + | DNA polymerase beta subunit Csac_1668 1821311 - 1823014 + | transposase, IS4 family protein Csac_1669 1823104 - 1823508 + | hypothetical protein Csac_1670 1823551 - 1824009 + | flagellar assembly protein FliW Csac_1671 1824022 - 1824264 + | carbon storage regulator, CsrA TERM 1816 1824455 - 1824445 - gf 81 -4 -5.42975 | opp_overlap 1824445 TGATACAAAGAAAAA TCTT GAG AAGA TTTTAGATAAAGAAG Csac_1672 1824251 - 1824691 + | DNA polymerase beta subunit Csac_1673 1824657 - 1825076 + | hypothetical protein TERM 1817 1825083 - 1825115 + F 88 -6.3 -5.40072 | opp_overlap 1825082 1825090, overlap 1825090 GGAATTTAATTAAAT GTTATAAGGCAGG CAGAAGA CCTGCCTTTTTAC TTTTTTTGGCAAGAC TERM 1818 1825108 - 1825090 - f 73 -8.1 -3.40784 | opp_overlap 1825090 1825083, overlap 1825082 AATTAAATGTTATAA GGCAGGC AGAAG ACCTGCC TTTTTACTTTTTTTG TERM 1819 1825090 - 1825108 + F 91 -7.4 -5.31158 | opp_overlap 1825082 1825090, overlap 1825083 AATTAAATGTTATAA GGCAGG CAGAAGA CCTGCC TTTTTACTTTTTTTG TERM 1820 1825218 - 1825177 - f 85 -6.9 -5.07567 | opp_overlap 1825189 1825196 1825198 1825207, overlap 1825195 1825198 1825200 GTATACTTTAAAAAA TTAGCTTAAAAATATGAAG TATA CTTTATATTTTTAGACTAA AAATTTAAAGTATGT TERM 1821 1825196 - 1825232 + F 77 -9.1 -3.33348 | opp_overlap 1825177 1825195 1825198 1825200, overlap 1825189 1825198 1825207 CTTAAAAATATGAAG TATACTTTATATTTTTA GAC TAAAAATTTAAAGTATG TGTTATAATATTAAA TERM 1822 1825198 - 1825230 + F 78 -9.5 -3.22851 | opp_overlap 1825177 1825195 1825198 1825200, overlap 1825189 1825196 1825207 TAAAAATATGAAGTA TACTTTATATTTTTA GAC TAAAAATTTAAAGTA TGTGTTATAATATTA TERM 1823 1825230 - 1825198 - f 75 -9.5 -2.91214 | opp_overlap 1825189 1825198 1825196 1825207, overlap 1825177 1825195 1825200 TAAAAATATGAAGTA TACTTTATATTTTTA GAC TAAAAATTTAAAGTA TGTGTTATAATATTA TERM 1824 1826271 - 1826258 - g 78 -3.9 -5.41143 | TAGGTGGCAAAAAAA TTTTG AAAG CAAAA CCGAAAATATATATA Csac_1674 1825264 - 1826697 + | AAA family ATPase TERM 1825 1827602 - 1827584 - g 76 -5.2 -4.89966 | overlap 1827586 1827600 ATACCCAAAAACAAA CGGCTTGC CTT GCAAACTG GCAGTATGCAAGAAA Csac_1675 1826876 - 1827712 + | hypothetical protein Csac_1676 1827716 - 1828870 + | hypothetical protein Csac_1677 1828908 - 1830095 + | hypothetical protein Csac_1678 1830100 - 1831257 + | hypothetical protein Csac_1679 1831266 - 1833368 + | DEAD/DEAH box helicase domain-containing protein TERM 1826 1833462 - 1833443 - f 93 -8.6 -4.82998 | TGAAAGCAAAATAAA GCTTCACA GGGA CGTGAAGC TAAAAAAATTAAGCT TERM 1827 1834283 - 1834298 + G 78 -7.6 -4.24123 | opp_overlap 1834283 1834282 1834285 1834296, overlap 1834296 CTCGCTCAGGCAAAT CAGCTT CCAC AAGCTG TTTTACAGTTGTTGA Csac_1680 1833497 - 1834318 + | flagellin domain-containing protein TERM 1828 1834369 - 1834335 - f 79 -8.6 -3.84719 | opp_overlap 1834342, overlap 1834340 1834342 AGGTTTAAAGCTAAA TAAAAGGGCCCTGGTT TTA AGCCAGGGCTTTTTTA AAGTTTTTTGGAAGG TERM 1829 1834364 - 1834340 - f 70 -4.1 -4.96468 | opp_overlap 1834342, overlap 1834335 1834342 TAAAGCTAAATAAAA GGGCCCTGGTT TTA AGCCAGGGCTT TTTTAAAGTTTTTTG TERM 1830 1834362 - 1834342 - f 82 -11.1 -2.72126 | opp_overlap 1834342, overlap 1834340 1834335 AAGCTAAATAAAAGG GCCCTGGTT TTA AGCCAGGGC TTTTTTAAAGTTTTT TERM 1831 1834342 - 1834362 + F 100 -13.3 -5.16472 | opp_overlap 1834340 1834335 1834342 AAGCTAAATAAAAGG GCCCTGGTT TTA AGCCAGGGC TTTTTTAAAGTTTTT Csac_1681 1834399 - 1836297 + | glycosyl transferase family protein TERM 1832 1837186 - 1837204 + G 70 -6.8 -4.03167 | overlap 1837187 ACAGAAAAAAGGGCT TCAACATA GCT TATGTTGG TTATTTGAATTATAG TERM 1833 1837614 - 1837598 - g 73 -6.7 -4.20092 | opp_overlap 1837597 AGAAGAAAAATATAA TTCTATA GAA TATAGAA GATTTGTTGAAAATA Csac_1682 1836366 - 1838390 + | methyltransferase type 11 Csac_1684 1839506 - 1839979 + | hypothetical protein Csac_1685 1840427 - 1841824 + | metal dependent phosphohydrolase Csac_1686 1841833 - 1842348 + | hypothetical protein TERM 1834 1842490 - 1842513 + T 85 -4.7 -5.54192 | ATATGGCCGAAGTTT CTAAATCAG GGTTAA TTGATTTAG TTTTTTTAAGTTGGT Csac_1688 1843497 - 1843123 - | hypothetical protein Csac_1689 1844078 - 1843494 - | hypothetical protein Csac_1691 1846400 - 1844922 - | integrase catalytic subunit TERM 1835 1846855 - 1846885 + G 95 -12.8 -4.30911 | opp_overlap 1846861, overlap 1846861 GTAACCATAAGATTG TAAAAACCTGCG GTACAGA CGCAGGTTTTTA TTTATATTGTAATTA TERM 1836 1846861 - 1846879 + G 100 -7.4 -5.4659 | opp_overlap 1846861, overlap 1846855 ATAAGATTGTAAAAA CCTGCG GTACAGA CGCAGG TTTTTATTTATATTG TERM 1837 1846879 - 1846861 - g 81 -7.4 -4.67556 | opp_overlap 1846855 1846861 ATAAGATTGTAAAAA CCTGCG GTACAGA CGCAGG TTTTTATTTATATTG Csac_1692 1846638 - 1846916 + | hypothetical protein Csac_1693 1846922 - 1847389 + | hypothetical protein Csac_1694 1847373 - 1848092 + | hypothetical protein Csac_1695 1848477 - 1848722 + | hypothetical protein Csac_1696 1849351 - 1849031 - | DNA polymerase beta subunit Csac_1697 1849716 - 1849324 - | HEPN domain-containing protein Csac_1698 1849860 - 1850258 + | flagellar protein FlaG protein Csac_1699 1850273 - 1851895 + | flagellar hook-associated 2 domain-containing protein Csac_1700 1851992 - 1852369 + | flagellar protein FliS TERM 1838 1852612 - 1852596 - g 80 -2.3 -5.62552 | overlap 1852598 AAAAAAAGCAAAAAA TATCAAA AGT TTTGATG AGATAACTGACATAG Csac_1701 1852384 - 1852848 + | hypothetical protein Csac_1702 1853229 - 1852909 - | hypothetical protein Csac_1703 1853516 - 1853256 - | hypothetical protein Csac_1704 1854439 - 1853621 - | hypothetical protein TERM 1839 1853788 - 1853810 + g 95 -7 -5.38951 | AAAGAGTAGGAGTCA GGTCATCAGG ATG CTTGATAACC TTTTTTATGTACGTT TERM 1840 1853970 - 1853950 - G 74 -4.7 -4.75472 | TGCAGATTAAGAAAA TGACAATCG CAT CAAATGTCA AAACCTTCTTTTCAC TERM 1841 1854273 - 1854244 - G 73 -5.7 -4.71426 | overlap 1854245 TTGGCAGCAAGAAAA TTGCAGCAAGGAT GTAC ATCGCTGCAGCAA TGAGGTAGGCTGTTT Csac_1705 1855395 - 1854844 - | 2'-5' RNA ligase TERM 1842 1855211 - 1855226 + g 78 -4 -5.35222 | opp_overlap 1855188 1855187 TCTTTTAAATTTTTT TCAAGC GCCT GTTTGA TTTTTTCTACCTTTT Csac_1706 1855514 - 1855816 + | hypothetical protein Csac_1707 1855827 - 1856633 + | glutamate 5-kinase TERM 1843 1856943 - 1856954 + G 71 -7.2 -3.9461 | TTTCAATGTGGAAGC GCCC AAAT GGGC TTATTATTGGACAAA TERM 1844 1856978 - 1856994 + G 73 -9.5 -2.88999 | opp_overlap 1856976 1856975 GGACAAAAAAGAGTG CCAATTG GGG CAATTGG TATAATCTATGAGGC Csac_1708 1856642 - 1857901 + | gamma-glutamyl phosphate reductase Csac_1709 1857989 - 1858291 + | DNA polymerase beta subunit TERM 1845 1858305 - 1858337 + F 77 -8.5 -3.70842 | opp_overlap 1858305 1858306, overlap 1858305 1858307 GAGTATATTCAATAA GGGGCTGTTTTCATG AAA TATGAAGACAGCCTG CTTTTGTTTTGTGGT TERM 1846 1858305 - 1858338 + F 93 -8.3 -5.20781 | gap 1, opp_overlap 1858305 1858306, overlap 1858305 1858307 GAGTATATTCAATAA G-GGGCTGTTTTCATG AAA TATGAAGACAGCCTGC TTTTGTTTTGTGGTA TERM 1847 1858307 - 1858335 + F 100 -13.3 -3.41164 | opp_overlap 1858306 1858305, overlap 1858305 1858305 GTATATTCAATAAGG GGCTGTTTTCATG AAA TATGAAGACAGCC TGCTTTTGTTTTGTG TERM 1848 1860486 - 1860476 - g 93 -4 -5.96219 | GAGGGAGAAAAAAAA GTTT ATC AAAC GACCTCAAAAAATGT Csac_1710 1858403 - 1860766 + | MutS2 family protein TERM 1849 1861069 - 1861043 - g 77 -10.2 -3.28712 | opp_overlap 1861031, overlap 1861044 GTTGTTTGTGTACAA GCTTGGATACGC TCT GCATATCCAAGA TGTAAAACGAGGCGA TERM 1850 1861068 - 1861044 - g 91 -13.7 -2.57132 | overlap 1861043 TTGTTTGTGTACAAG CTTGGATACGC TCT GCATATCCAAG ATGTAAAACGAGGCG Csac_1711 1860852 - 1861409 + | signal peptidase I Csac_1712 1861451 - 1861975 + | hypothetical protein TERM 1851 1862563 - 1862545 - g 73 -6.8 -4.20875 | overlap 1862542 TATGAAAAAACACAA GATTGAAA AGC TTCCAATC GTCGATGATGAGGGT Csac_1713 1862006 - 1863472 + | inosine-5'-monophosphate dehydrogenase TERM 1852 1863568 - 1863600 + G 86 -9.2 -4.33165 | overlap 1863571 CAAAAAAATCATATT TTACAGTTGCACCC GAAAG GGGTGCAATTGTTG TTTTACTAAATTTAA TERM 1853 1863571 - 1863597 + G 100 -13.1 -4.2693 | overlap 1863568 AAAAATCATATTTTA CAGTTGCACCC GAAAG GGGTGCAATTG TTGTTTTACTAAATT TERM 1854 1863687 - 1863668 - g 78 -5.8 -4.77173 | gap 1, opp_overlap 1863667 1863668 1863672 1863673 1863682, overlap 1863673 GTTTGACAAAACAAA GAATATCCG AGG CGGA-ATTC CTATTCTATTTCCTA Csac_1714 1863462 - 1864364 + | aldose 1-epimerase Csac_1715 1864384 - 1865196 + | PP family ATPase Csac_1716 1865220 - 1865981 + | NCAIR mutase (PurE)-related protein TERM 1855 1866274 - 1866259 - g 70 -3.3 -4.90217 | TAAAGATATCAAAAA GCTTT TACAAG AAAGC AAGCTGCCAGAAGCA Csac_1717 1866011 - 1866748 + | hypothetical protein Csac_1718 1866751 - 1867122 + | hypothetical protein TERM 1856 1867177 - 1867135 - T 100 -10.6 -5.07107 | opp_overlap 1867135 1867134 TAAAGTTTCAAAAAA GGGCTGGCGATTGCCGAC AACTTGG GTAAATAATCGCCAGCCC CTTTAAATATGTTTT Csac_1719 1868288 - 1867200 - | translation-associated GTPase TERM 1857 1867387 - 1867400 + g 73 -2.3 -5.32944 | TTTCCTGCTGCCTGT GGTGC TTTT GTGCC TTTTTTGATTGTCCA TERM 1858 1868039 - 1868028 - G 74 -4.4 -5.02502 | TATATGAGACAAAAA CTTG TTGC CAAG ACCTTCGCCCTTGCT TERM 1859 1868444 - 1868410 - R 100 -8.7 -5.45802 | TTGCTAAAATAAAAA GGCTGCTTTGCTC AAACAACCA AAGCAAAACAGCC TACCTAATTTCCCAC Csac_1720 1869337 - 1868672 - | lytic transglycosylase, catalytic Csac_1721 1869626 - 1869369 - | hypothetical protein Csac_1722 1871467 - 1869650 - | methyl-accepting chemotaxis sensory transducer TERM 1860 1871280 - 1871294 + g 81 -8.6 -4.14511 | CTCCACATCTGCTGA GGCAAA ATG TTTGCC TTTTCACATGCCCTT TERM 1861 1871595 - 1871576 - R 90 -4.2 -5.95539 | opp_overlap 1871571 1871578 CTTGAAATAAAAAAA GAGCACAT TTTT AAGTGCCC TTTTCATTTCTTCTC Csac_1723 1871786 - 1871586 - | hypothetical protein Csac_1724 1871885 - 1872316 + | hypothetical protein Csac_1725 1872369 - 1873190 + | AraC family transcriptional regulator TERM 1862 1873217 - 1873201 - f 74 -5.9 -4.65838 | GATAGATTTTAAAAA GTAAACG CAA CATTTAC CAAAGTGGAGGCGTT Csac_1726 1873236 - 1874021 + | hypothetical protein TERM 1863 1874081 - 1874047 - T 100 -10.1 -5.19819 | opp_overlap 1874052, overlap 1874052 AAACAAAAGCAAAAA GCAAATGGCAGCACT TTAAT AGTGCTGCCATTTTT GAAGTCTTTATAAGT TERM 1864 1874052 - 1874076 + T 100 -14.4 -4.6856 | opp_overlap 1874052 1874047 AAAGCAAAAAGCAAA TGGCAGCACT TTAAT AGTGCTGCCA TTTTTGAAGTCTTTA TERM 1865 1874076 - 1874052 - T 100 -14.4 -4.39092 | opp_overlap 1874052, overlap 1874047 AAAGCAAAAAGCAAA TGGCAGCACT TTAAT AGTGCTGCCA TTTTTGAAGTCTTTA Csac_1727 1874436 - 1874089 - | thioredoxin Csac_1728 1874729 - 1874460 - | hypothetical protein TERM 1866 1875534 - 1875520 - g 75 -7.2 -4.32583 | overlap 1875512 CCAACAGCAAAACAA TTTGAG ATA CTCAAA AAACTTGCTGATGCA TERM 1867 1875551 - 1875538 - g 86 -6.7 -5.14477 | GAGATACTCAAAAAA CTTGC TGAT GCAAG CTATAAGGTAATAAC Csac_1729 1875148 - 1876308 + | glycosyl transferase, group 1 TERM 1868 1877191 - 1877181 - g 76 -3.2 -5.40464 | opp_overlap 1877183, overlap 1877183 GAGTACAAAGAAAAA GCTC TAA AAGC GTTTAGATGGTTTTT Csac_1730 1876305 - 1877387 + | hypothetical protein TERM 1869 1877412 - 1877366 - f 89 -11.9 -3.30767 | gap 1, opp_overlap 1877366 1877376, overlap 1877376 GATAAAAAGTGAAGA GAAGAACAAA-GAGGTTGTGTA AAAC TTCACAACCTCTTTTTTTCTTC TGATTTTTTAAAAAT TERM 1870 1877366 - 1877412 + F 91 -11.9 -3.38056 | gap 1, opp_overlap 1877366 1877376, overlap 1877376 GATAAAAAGTGAAGA GAAGAACAAA-GAGGTTGTGTA AAAC TTCACAACCTCTTTTTTTCTTC TGATTTTTTAAAAAT TERM 1871 1877401 - 1877376 - f 95 -10.5 -4.57503 | opp_overlap 1877376 1877366, overlap 1877366 GAAGAGAAGAACAAA GAGGTTGTGTA AAAC TTCACAACCTC TTTTTTTCTTCTGAT TERM 1872 1877376 - 1877401 + F 100 -10.5 -5.89921 | opp_overlap 1877366 1877376, overlap 1877366 GAAGAGAAGAACAAA GAGGTTGTGTA AAAC TTCACAACCTC TTTTTTTCTTCTGAT TERM 1873 1878269 - 1878254 - g 71 -4.8 -4.55111 | AGAAAATAAAAAAGA TTTTTC GGAA GAAAAA AAGGTCTTAGAGATG Csac_1731 1877601 - 1878311 + | hypothetical protein Csac_1732 1878305 - 1879405 + | hypothetical protein TERM 1874 1880148 - 1880138 - g 70 -5.4 -4.43173 | AAAAAGAACTCAAAA CTCA CGA TGAG GCGCTAAGGTATCTA Csac_1733 1879441 - 1881462 + | DNA ligase, NAD-dependent Csac_1734 1881465 - 1883111 + | hypothetical protein Csac_1735 1883132 - 1883440 + | hypothetical protein Csac_1736 1883538 - 1884464 + | cysteine synthase A TERM 1875 1884504 - 1884470 - T 100 -9.2 -5.43866 | opp_overlap 1884473, overlap 1884471 1884472 GAATGTGTAAAAAAA TTCCGGCTCTACGCAG TCT CTGCATAGAGCCGTTT TTTATTTTCCACTTT TERM 1876 1884503 - 1884471 - T 100 -12.7 -3.85235 | opp_overlap 1884473, overlap 1884470 1884472 AATGTGTAAAAAAAT TCCGGCTCTACGCAG TCT CTGCATAGAGCCGTT TTTTATTTTCCACTT TERM 1877 1884502 - 1884472 - T 100 -16.2 -2.90056 | opp_overlap 1884473, overlap 1884471 1884470 ATGTGTAAAAAAATT CCGGCTCTACGCAG TCT CTGCATAGAGCCGT TTTTTATTTTCCACT TERM 1878 1884473 - 1884501 + T 100 -17.5 -5.79595 | opp_overlap 1884472 1884471 1884470 TGTGTAAAAAAATTC CGGCTCTACGCAG TCT CTGCATAGAGCCG TTTTTTATTTTCCAC Csac_1737 1884868 - 1884506 - | hypothetical protein TERM 1879 1884751 - 1884727 - G 89 -7.9 -5.04325 | opp_overlap 1884719, overlap 1884729 GGTAAATGACAAAAA TAGCTTCCATC AGT GATGCAAGCCA TGTAAGTCTTTTGTA TERM 1880 1884749 - 1884729 - G 79 -8.3 -4.13732 | opp_overlap 1884719, overlap 1884727 TAAATGACAAAAATA GCTTCCATC AGT GATGCAAGC CATGTAAGTCTTTTG Csac_1738 1885803 - 1884907 - | putative circadian clock protein, KaiC TERM 1881 1885625 - 1885635 + g 70 -6.8 -4.08064 | opp_overlap 1885616 GAATACGCGGGAATT CCAC CAA GTGG TTTTACAACAGGCTT TERM 1882 1886065 - 1886039 - H 89 -12.6 -2.66882 | overlap 1886044 1886051 AAAAATTTGATATCA TTTAATTGAGAA TAA TTCTCAATTAAA ATAAACTATCAATTA TERM 1883 1886060 - 1886044 - H 70 -8.1 -3.11634 | overlap 1886039 1886051 TTTGATATCATTTAA TTGAGAA TAA TTCTCAA TTAAAATAAACTATC Csac_1739 1886141 - 1886356 + | FeoA family protein TERM 1884 1886903 - 1886889 - g 83 -7.2 -4.87665 | GGCGATTGATAAAAA CCTTTT TAG AAAAGG CAATCCTACACCACA Csac_1740 1886380 - 1888209 + | small GTP-binding protein TERM 1885 1888641 - 1888618 - g 72 -3.8 -4.92385 | overlap 1888620 GATAGTTAAAGAAAA GATGCCAG AAATAGGA CTGGCAAC AGTGTATAGAACAAT Csac_1741 1888466 - 1888909 + | ferric uptake regulator family protein TERM 1886 1888898 - 1888933 + T 82 -7.7 -4.37658 | opp_overlap 1888903, overlap 1888903 ATCTGCAAAGAGTGT AAAAAGGAATGAGAG AAAAGC CTCTCATTCCTTTGA TTTTATAAGAACCTT TERM 1887 1888928 - 1888903 - T 100 -12.7 -4.6856 | opp_overlap 1888898 1888903 CAAAGAGTGTAAAAA GGAATGAGAGA AAAG CCTCTCATTCC TTTGATTTTATAAGA TERM 1888 1888903 - 1888928 + T 100 -12 -4.26881 | opp_overlap 1888903, overlap 1888898 CAAAGAGTGTAAAAA GGAATGAGAG AAAAGC CTCTCATTCC TTTGATTTTATAAGA Csac_1742 1889227 - 1888922 - | hypothetical protein Csac_1743 1889925 - 1889245 - | cell wall hydrolase, SleB Csac_1744 1890076 - 1891230 + | Serine-type D-Ala-D-Ala carboxypeptidase Csac_1745 1892495 - 1891371 - | glycosyl transferase, group 1 TERM 1889 1892222 - 1892209 - G 75 -5.3 -4.83615 | opp_overlap 1892209 CACTTTTTAGAAAAA GGAAT GCCT ATTCC GTTTTGAGGAACGTG Csac_1746 1892574 - 1893509 + | pseudouridine synthase Csac_1747 1893506 - 1894753 + | poly-gamma-glutamate biosynthesis protein Csac_1748 1894781 - 1896589 + | GTP-binding protein LepA TERM 1890 1897391 - 1897412 + G 78 -3.8 -5.41143 | gap 1, overlap 1897395 GTGAATCATATATTG GAATTGGCT CAAGT AGCCA-TTC TTTTTTTGAAGGATA TERM 1891 1897395 - 1897409 + G 75 -5.7 -4.79949 | overlap 1897391 ATCATATATTGGAAT TGGCT CAAGT AGCCA TTCTTTTTTTGAAGG Csac_1749 1896607 - 1897737 + | putative oxygen-independent coproporphyrinogen III oxidase TERM 1892 1897832 - 1897806 - f 77 -8.9 -3.34962 | gap 1 TCTTATATCTTAGAA TTAGCACTCATC AAAT GA-GAGTGCTAA CAGTAAGGTGAGGAA Csac_1750 1897849 - 1898880 + | heat-inducible transcription repressor HrcA Csac_1751 1898902 - 1899558 + | GrpE protein Csac_1752 1899599 - 1901419 + | chaperone protein DnaK TERM 1893 1901444 - 1901481 + F 87 -7.9 -4.85267 | opp_overlap 1901444 1901443, overlap 1901461 1901463 ATTCTTTAGAAAAAG GGACCAAAGTCAT AACACTTTAAAA ATGGCTTTGGTCC TTTTTAATGATTTGT TERM 1894 1901941 - 1901925 - g 71 -5.1 -4.55653 | opp_overlap 1901925 AGAAGAAGAAAAGAA GCACC AAGAAAA GGTGC TGATATACAGGTTGA TERM 1895 1902166 - 1902154 - g 93 -7.7 -5.22006 | TTACTACAATAAAAA CATGC GAT GCATG TGGTGGAGTTGGAAC Csac_1753 1901553 - 1902716 + | chaperone protein DnaJ Csac_1754 1902750 - 1903658 + | ribosomal protein L11 methyltransferase TERM 1896 1903891 - 1903881 - g 75 -5.4 -4.84914 | AGCGATAGAAGAAAA GGTT CTC AACC AACGGGAGCCACAAA Csac_1755 1903681 - 1904409 + | hypothetical protein Csac_1756 1904425 - 1905573 + | aminotransferase, class V Csac_1757 1905577 - 1906773 + | thiamine biosynthesis/tRNA modification protein ThiI Csac_1758 1906775 - 1907488 + | pseudouridine synthase TERM 1897 1908082 - 1908100 + G 70 -8.8 -3.10597 | opp_overlap 1908081, overlap 1908081 AAGTGAGGATAGTAG GTGAGGGC ACA GACCTCAC ATTTTCAATAAAAGG Csac_1759 1907514 - 1908629 + | peptidase M29, aminopeptidase II Csac_1760 1908702 - 1909004 + | hypothetical protein TERM 1898 1909014 - 1909037 + T 100 -9.6 -5.1167 | opp_overlap 1909000 1908998 ACCTAAATTATTTTA GGGGGATG ATTTTTGG CATCCCCC TTTTTATATTCCCTT Csac_1761 1909255 - 1909067 - | hypothetical protein Csac_1762 1909446 - 1910282 + | ABC transporter related Csac_1763 1910267 - 1911139 + | ABC transporter related Csac_1764 1911139 - 1911927 + | cobalt transport protein truA 1911934 - 1912668 + | tRNA pseudouridine synthase A Csac_1768 1914633 - 1913509 - | hypothetical protein TERM 1899 1914645 - 1914659 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT TERM 1900 1914963 - 1914987 + G 100 -8.7 -5.30616 | AAGTATGCCTATGGA GTGGATAGA CTATGCT TCTATCCAC TTTTTGTTTAAATCA TERM 1901 1915182 - 1915168 - g 74 -2.8 -5.31275 | opp_overlap 1915168 GCTGAGGAGAAAAAA CTTGAC CTT GTTAAG ATTGCTCCTCATGCA Csac_1769 1914952 - 1915554 + | translation initiation factor IF-3 Csac_1770 1915584 - 1915781 + | ribosomal protein L35 Csac_1771 1915816 - 1916172 + | ribosomal protein L20 Csac_1772 1916209 - 1917024 + | tRNA/rRNA methyltransferase (SpoU) TERM 1902 1917028 - 1917076 + F 71 -8.3 -3.35073 | opp_overlap 1917028 1917027 AGAAAGAAATAGAAC TTTTGAAGCCTTCATCCAAGATT TTT AAAGATGGATGAGGGCTTAAAAA TTAATTAAAGGTGGT Csac_1773 1917095 - 1917355 + | hypothetical protein TERM 1903 1917458 - 1917447 - g 80 -2.2 -5.74122 | GAGGATATAAAAAAA GCTC TGGA GAAC AAAAAAGGCGGATTT Csac_1774 1917381 - 1918805 + | hypothetical protein TERM 1904 1918892 - 1918878 - g 71 -4.3 -4.83169 | ACCTCTTCAGAAAAA TCTTC CAATT GAAGA GGGGGCAGAGCTTTT TERM 1905 1919695 - 1919716 + G 76 -9.5 -3.38046 | overlap 1919693 1919697 TGCTTGTGCTGTGGA TACTGCAGT AGAT ACTGCAGTG TATTTGCGATCAAGA TERM 1906 1919697 - 1919714 + G 77 -9.9 -3.26031 | overlap 1919695 1919693 CTTGTGCTGTGGATA CTGCAGT AGAT ACTGCAG TGTATTTGCGATCAA Csac_1775 1918792 - 1919739 + | aldo/keto reductase Csac_1776 1919766 - 1920182 + | Holliday junction resolvase YqgF Csac_1777 1920263 - 1921174 + | quinolinate synthetase complex, A subunit TERM 1907 1921384 - 1921372 - g 72 -7.7 -3.73144 | overlap 1921363 AGATTAGCAACACAA CCTTG GCT CAAGG TGGAATTGCCGCGCC TERM 1908 1921688 - 1921703 + G 73 -6.2 -4.5032 | ATATAATAATGTGAC GGTATT TGAA AATACC TTTCTTGTTGATATA TERM 1909 1922636 - 1922622 - g 78 -6.4 -4.58773 | TTGAGCAAAGTAAAA CTTCAG ACT CCGAAG CAAATAGAGTATTAC Csac_1778 1921197 - 1922807 + | L-aspartate oxidase TERM 1910 1923496 - 1923483 - g 74 -3.8 -5.23316 | GATGATATGAAAAAA GCTG TAGAAG CAGC ATCAGGGAAGGCTTT Csac_1779 1922808 - 1923647 + | nicotinate-nucleotide pyrophosphorylase TERM 1911 1924490 - 1924511 + G 74 -8.1 -3.66497 | opp_overlap 1924484, overlap 1924483 ATTGAACAAGTTGCA CAGGTTTTT TTGC AAAAGCCTG TTTCAACCTTTATTG TERM 1912 1925509 - 1925525 + G 74 -3.7 -5.0925 | opp_overlap 1925509 AAACGAAAAGATAGA GACAATA AAC TCTTGTC TTTTTGGTTTTACAG Csac_1780 1923671 - 1925605 + | nitrate reductase TERM 1913 1925946 - 1925961 + G 72 -7.6 -3.68071 | overlap 1925930 1925945 GTATGACGCAGTTGT GCCATT TTAC AATGGC TATTTTGAACCTTTA Csac_1781 1925602 - 1926201 + | molybdopterin-guanine dinucleotide biosynthesis protein A-like protein Csac_1782 1926194 - 1926760 + | NUDIX hydrolase Csac_1783 1926779 - 1927948 + | protein of unknown function Met10 TERM 1914 1928478 - 1928466 - g 78 -6.3 -4.73092 | opp_overlap 1928477 ACAAGCCAAAAGAAA TAGCT GAA AGCTA TGGTGCATACTTTGA TERM 1915 1928738 - 1928728 - g 86 -5.4 -5.41787 | GAAAAAACATAAAAA CTAC GAG GTAG TTGAGATAAAAAAAT Csac_1784 1927976 - 1929343 + | NOL1/NOP2/sun family RNA methylase Csac_1785 1929345 - 1930043 + | pseudouridine synthase TERM 1916 1930109 - 1930099 - g 78 -4 -5.28176 | opp_overlap 1930099 GGCAGGGATAAAAAA TCTT GTT AAGA TTTCTATATTTGGTG Csac_1786 1930076 - 1930660 + | hypothetical protein Csac_1787 1930674 - 1931024 + | hypothetical protein Csac_1788 1931045 - 1932685 + | Dak phosphatase TERM 1917 1932765 - 1932752 - g 73 -5.3 -4.65584 | opp_overlap 1932752 AGAAAGTAGAGAAAA GCTTT TTAG AAAGC TTGGTATTAAAAAAG TERM 1918 1933909 - 1933899 - g 84 -3.2 -5.626 | GAGCTTACAAAAAAA GGAA ATT CTCC AAACATACTTGTTAT Csac_1789 1932693 - 1934732 + | ATP-dependent DNA helicase RecG Csac_1790 1934832 - 1935029 + | small acid-soluble spore protein, alpha/beta type TERM 1919 1935096 - 1935056 - f 71 -8.3 -3.24232 | opp_overlap 1935058, overlap 1935058 1935061 GGGGTTTTAAAGATA CACAACAGCGAAGGGACTT TTG AGGTCTCTTCGTTGTTGTT TTTTTAGAGGGATTT TERM 1920 1935094 - 1935058 - f 85 -10.9 -3.18571 | opp_overlap 1935058, overlap 1935056 1935061 GGTTTTAAAGATACA CAACAGCGAAGGGACTT TTG AGGTCTCTTCGTTGTTG TTTTTTTAGAGGGAT TERM 1921 1935058 - 1935094 + F 100 -17.5 -5.40474 | opp_overlap 1935056 1935058 1935061 GGTTTTAAAGATACA CAACAGCGAAGGGACTT TTG AGGTCTCTTCGTTGTTG TTTTTTTAGAGGGAT Csac_1791 1935154 - 1935708 + | putative methyltransferase Csac_1792 1935705 - 1936211 + | pantetheine-phosphate adenylyltransferase Csac_1793 1936211 - 1936669 + | hypothetical protein Csac_1794 1937648 - 1936671 - | hypothetical protein Csac_1795 1937713 - 1938471 + | patatin Csac_1796 1939662 - 1938460 - | hypothetical protein Csac_1797 1939854 - 1940999 + | acyl-CoA dehydrogenase domain-containing protein Csac_1798 1941018 - 1941806 + | electron transfer flavoprotein beta-subunit TERM 1922 1942537 - 1942520 - g 70 -2.7 -5.13648 | TAAAGACAAAGAAAA TCTAAAG TATG CTTTTGA GCTTGCAGATCTTTT Csac_1799 1941849 - 1942844 + | electron transfer flavoprotein, alpha subunit Csac_1800 1942871 - 1943752 + | beta-lactamase domain-containing protein Csac_1801 1943770 - 1944555 + | lipopolysaccharide biosynthesis protein Csac_1802 1944593 - 1945702 + | glutamine--scyllo-inositol transaminase TERM 1923 1946687 - 1946677 - g 76 -3.2 -5.25805 | overlap 1946680 1946681 AACAAATTCAAAAAA CCAC TGA ATGG TTCAAAAATACTGGT Csac_1803 1945702 - 1947015 + | UDP-glucose/GDP-mannose dehydrogenase Csac_1804 1947034 - 1948158 + | oxidoreductase domain-containing protein Csac_1805 1948155 - 1948895 + | hexapaptide repeat-containing transferase Csac_1806 1948861 - 1950057 + | hypothetical protein Csac_1807 1950035 - 1951321 + | hypothetical protein TERM 1924 1952061 - 1952042 - g 84 -5 -5.30339 | ATGAAAAGATAAAAA TTTGGGGA AGAG TGCCCAAA AGCTGTGTTCCTGAT Csac_1808 1951318 - 1952415 + | glycosyl transferase, group 1 Csac_1809 1952449 - 1953789 + | cell envelope-related transcriptional attenuator Csac_1810 1953860 - 1954381 + | CarD family transcriptional regulator TERM 1925 1955067 - 1955081 + G 76 -4.3 -5.15167 | ATATTAAAGCTTCCT CATAC AATAG GTATG TTTTTATTGATGATC Csac_1811 1954395 - 1955297 + | hypothetical protein Csac_1812 1955353 - 1955964 + | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 1926 1956007 - 1955969 - T 88 -6.8 -5.1615 | opp_overlap 1955972, overlap 1955972 CGAATAGTTAAAAAA GAAGGGACTGAGAG GCAGGTCTTTT CTCTCAGCCCCTTT TCTGTTTTGGGGTTT TERM 1927 1956004 - 1955972 - T 89 -8.5 -4.65666 | opp_overlap 1955972, overlap 1955969 ATAGTTAAAAAAGAA GGGACTGAGAG GCAGGTCTTTT CTCTCAGCCCC TTTTCTGTTTTGGGG TERM 1928 1955972 - 1956004 + T 93 -9.1 -4.89567 | opp_overlap 1955972 1955969 ATAGTTAAAAAAGAA GGGACTGAGAGGCAG GTC TTTTCTCTCAGCCCC TTTTCTGTTTTGGGG Csac_1813 1957415 - 1956027 - | argininosuccinate lyase TERM 1929 1956724 - 1956712 - G 70 -2.7 -5.08255 | ATTTCTAAAATAAAA TCTCT GTC AGAAA CTGTATCTATACTAT TERM 1930 1956990 - 1957008 + g 76 -3.2 -5.26918 | overlap 1956992 TTCTTCTGCTAATTT TATAATAG TAT CTATTAAA TTTTTTATCAGCTCT Csac_1814 1958619 - 1957402 - | argininosuccinate synthase TERM 1931 1958117 - 1958130 + g 73 -5.3 -4.57073 | opp_overlap 1958117, overlap 1958104 TCTTCTTTTTTGAAA GGAAT ATCT ATTCC TTTTTGGGCAAGGTA Csac_1815 1958771 - 1959361 + | nicotinate (nicotinamide) nucleotide adenylyltransferase Csac_1816 1959358 - 1959936 + | metal dependent phosphohydrolase Csac_1817 1959933 - 1961144 + | cell envelope-related transcriptional attenuator Csac_1818 1961171 - 1961497 + | iojap-like protein leuS 1961544 - 1963997 + | leucyl-tRNA synthetase TERM 1932 1963998 - 1964032 + T 79 -7.3 -4.52505 | opp_overlap 1964004, overlap 1964004 ATTGTCATAAAATAA AAAAAAGAGGGTC AAGCTTGAG GACCCTCTTTTTA TTTTAGCTTTTTGTT TERM 1933 1964026 - 1964004 - T 100 -6.3 -6.37666 | opp_overlap 1964004 1963998 ATAAAATAAAAAAAA GAGGGTC AAGCTTGAG GACCCTC TTTTTATTTTAGCTT TERM 1934 1964004 - 1964026 + T 88 -6.3 -5.49568 | opp_overlap 1964004, overlap 1963998 ATAAAATAAAAAAAA GAGGGTC AAGCTTGAG GACCCTC TTTTTATTTTAGCTT Csac_1820 1965388 - 1964030 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 1935 1964090 - 1964100 + g 81 -5.4 -5.20333 | TGTTGACCTTAATTT GAGT TTT ACTC TTTTTCTTCTAAGTC TERM 1936 1964883 - 1964903 + g 75 -9.1 -3.55815 | TTGTGAAGCCCACTT GGATTTACA AAG TGTGAATCC TTTGCACCAATATTT Csac_1821 1965522 - 1966166 + | helix-hairpin-helix repeat-containing competence protein ComEA Csac_1822 1967259 - 1966153 - | hypothetical protein TERM 1937 1967271 - 1967285 + H 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT TERM 1938 1967540 - 1967530 - g 73 -5.4 -4.70319 | GTATCAAAACTAAAA TCAC ATG GTGA TTCAGAAGAATTTGA Csac_1823 1967503 - 1968024 + | hypothetical protein TERM 1939 1968039 - 1968029 - f 71 -5.4 -4.58663 | overlap 1968030 AGGAGGTGTGAAAAA GTTG GCT CAAC CAAAAAGAAGATGGT rpmF 1968030 - 1968206 + | 50S ribosomal protein L32 TERM 1940 1968213 - 1968238 + F 100 -9.8 -4.93365 | opp_overlap 1968213 GAAGACTAATCGAAA TAGCCCTGAG TGGATT TTCAGGGCTA TTTTTACTTATGAAA TERM 1941 1968238 - 1968213 - f 81 -9.1 -3.80858 | opp_overlap 1968213 GAAGACTAATCGAAA TAGCCCTGA GTGGATTT TCAGGGCTA TTTTTACTTATGAAA TERM 1942 1968521 - 1968501 - g 76 -7.7 -4.0044 | AAGCAGGATTATAAA TTACCTTTC TGT AAAAGGTAA AAGGATTTGTGTGCC Csac_1825 1968316 - 1968915 + | 5-formyltetrahydrofolate cyclo-ligase Csac_1826 1968896 - 1969969 + | metal dependent phosphohydrolase dnaE 1969993 - 1973418 + | DNA polymerase III DnaE Csac_1828 1973467 - 1973712 + | transcription attenuation protein MtrB Csac_1829 1973729 - 1973920 + | hypothetical protein Csac_1830 1973945 - 1974913 + | 6-phosphofructokinase TERM 1943 1975469 - 1975450 - g 71 -7.2 -3.95214 | overlap 1975454 ACTGACCCAAAAAGA CAAAGAAG ACAT CCTCTTTG GAATTGAAAACGATG TERM 1944 1975821 - 1975832 + G 71 -4.4 -4.7254 | CAGAAGTCAGCGATA TTGC AAAT GCAA TTTTTGATGGAACAT Csac_1831 1974935 - 1976686 + | pyruvate kinase Csac_1832 1976705 - 1977121 + | thioesterase superfamily protein Csac_1833 1977220 - 1977396 + | ribosomal protein S21 TERM 1945 1977607 - 1977597 - g 70 -3.2 -5.00027 | ATTAAAAAGAGAAAA GACA GCT TGCC TGAATATATAAAAAG TERM 1946 1977762 - 1977747 - g 74 -4.7 -4.84033 | ATAGAAAAAGTAAAA CCTTC TGGGAT GAAGG ATATGGGTAAGGTTA Csac_1834 1977414 - 1977863 + | GatB/Yqey domain-containing protein TERM 1947 1977906 - 1977879 - f 79 -7 -4.67168 | opp_overlap 1977879 AAAAAGCGTGAAAAA GTGGTTCTCTTT GAGA AAAGGGGACCAC TTTTTTGTTATAAAA TERM 1948 1977879 - 1977906 + F 100 -11.4 -5.55769 | opp_overlap 1977879 AAAAAGCGTGAAAAA GTGGTTCTCTTT GAGA AAAGGGGACCAC TTTTTTGTTATAAAA Csac_1835 1977984 - 1978277 + | hypothetical protein TERM 1949 1978984 - 1978994 + G 81 -5.4 -5.12068 | opp_overlap 1978984 GCAATAGCAGAGATA GTTG CAA CAAC TTTTTATTCAGTATC Csac_1836 1978279 - 1979421 + | hypothetical protein TERM 1950 1979792 - 1979776 - g 73 -6.5 -4.21737 | AGGAAAACAAGTAAA GCCCAAA ACA TTAGGGC AAAAAAGATATATTG Csac_1837 1979441 - 1980421 + | PhoH family protein Csac_1838 1980423 - 1981937 + | metal dependent phosphohydrolase Csac_1839 1981906 - 1982382 + | hypothetical protein Csac_1840 1982379 - 1983077 + | diacylglycerol kinase TERM 1951 1984079 - 1984065 - g 78 -3.6 -5.37043 | overlap 1984066 ATTTGATATAAAAAA CTCATT TAT AATGAA AGATAATGACGGCAA Csac_1841 1983091 - 1984167 + | hypothetical protein TERM 1952 1984675 - 1984692 + G 76 -7.7 -4.0641 | CAGGTCATATGCTTG GCTCAGC AATA GTTGAGC TTTATATAACTGAAA Csac_1842 1984164 - 1985804 + | RNA-metabolising metallo-beta-lactamase Csac_1843 1986352 - 1985810 - | hypothetical protein Csac_1844 1986422 - 1987567 + | chorismate synthase Csac_1845 1987630 - 1988763 + | Serine-type D-Ala-D-Ala carboxypeptidase TERM 1953 1988795 - 1988761 - T 100 -14.6 -4.58685 | opp_overlap 1988761 1988765, overlap 1988765 AAAGCCTCTCAAAAA TAAATTTAGCGTGG GCTTTAG CCACGCTAAATTTA TTTACTTTTCTATAA TERM 1954 1988761 - 1988795 + T 100 -14.6 -4.30161 | opp_overlap 1988761 1988765, overlap 1988765 AAAGCCTCTCAAAAA TAAATTTAGCGTGG GCTTTAG CCACGCTAAATTTA TTTACTTTTCTATAA TERM 1955 1988765 - 1988791 + T 100 -11 -4.69048 | opp_overlap 1988761 1988765, overlap 1988761 CCTCTCAAAAATAAA TTTAGCGTGG GCTTTAG CCACGCTAAA TTTATTTACTTTTCT TERM 1956 1988791 - 1988765 - T 100 -11 -4.85782 | opp_overlap 1988765 1988761, overlap 1988761 CCTCTCAAAAATAAA TTTAGCGTGG GCTTTAG CCACGCTAAA TTTATTTACTTTTCT Csac_1846 1989027 - 1988797 - | hypothetical protein TERM 1957 1990022 - 1990050 + G 73 -6.9 -4.1585 | gap 1 ATGTCATCACTTGCA TCT-GTCACTTC AAAGTG GAAGTGACAAGA TTTTGAAACTTATGA Csac_1847 1989255 - 1990559 + | RNA modification protein Csac_1848 1990577 - 1991599 + | phenylalanyl-tRNA synthetase, alpha subunit Csac_1849 1991635 - 1994007 + | phenylalanyl-tRNA synthetase, beta subunit TERM 1958 1994056 - 1994080 + G 90 -8.6 -4.4261 | opp_overlap 1994055 AAAGAGCAATTAGAG GCGGTTCTTT CAACA GAAGGACCGC TTTTAGTATTGGCCG TERM 1959 1994740 - 1994725 - g 88 -7.6 -4.84359 | opp_overlap 1994725 CTACTTTCACAAAAA CACAGA AATA TCTGTG TTGTAGGCGATGATG TERM 1960 1994934 - 1994920 - g 71 -8.6 -3.25789 | overlap 1994919 AACAGAAACAGAAAG CCAAAG AGA CTTTGG ACAGATAACAACGAA TERM 1961 1995665 - 1995652 - g 70 -5.3 -4.48869 | CAAAAAGAAGATAAA GTCAT GTTA ATGAC AGTCCATGCTGCGAA Csac_1850 1994017 - 1996161 + | UvrD/REP helicase Csac_1851 1996170 - 1996616 + | acid phosphatase/vanadium-dependent haloperoxidase related TERM 1962 1996871 - 1996903 + F 100 -13.7 -3.14931 | opp_overlap 1996875 TCCCGTGGAGGCTAA CGCACAAAAAGAA AACTAAA TTCTTTTTGTGCG TTAGTAAAACCTACC TERM 1963 1997003 - 1997035 + F 100 -12.9 -3.03124 | opp_overlap 1997000 TGGCCGAATTTATGG CTCCTCTAAAAATAG GGC CCGTTTTTAGAGGAG TCTTGAGGCCTGAAA TERM 1964 1997110 - 1997122 + F 78 -9.1 -3.53343 | overlap 1997102 AAGCTCCTAGGCTGT GCCGA CTT TCGGC TTTACGAAGGGGATT TERM 1965 1997209 - 1997226 + F 72 -9.1 -2.64155 | opp_overlap 1997207 1997206 TTTAAAGGGAAACCG CCTCCTG GCGA CGGGAGG TAAGTTTGGGGGAAA Csac_1852 1997350 - 1997898 + | hypothetical protein Csac_1853 1997918 - 1999771 + | deoxyxylulose-5-phosphate synthase Csac_1854 1999768 - 2000580 + | hemolysin A Csac_1855 2000605 - 2000955 + | hypothetical protein Csac_1856 2000960 - 2001379 + | putative anti-sigma regulatory factor, serine/threonine protein kinase TERM 1966 2002648 - 2002662 + G 73 -7.2 -4.08144 | opp_overlap 2002647 2002648 2002650, overlap 2002641 AGAGGTTTGGCAAAC GATACA GAT TGTATC TTTATCCTTCGTGAA Csac_1857 2001421 - 2002755 + | Fe-S cluster domain-containing protein Csac_1858 2002756 - 2003109 + | hypothetical protein Csac_1859 2003093 - 2003788 + | phosphotransferase domain-containing protein Csac_1860 2003897 - 2004379 + | NADH dehydrogenase (ubiquinone), 24 kDa subunit Csac_1861 2004425 - 2004985 + | histidine kinase Csac_1862 2004978 - 2005367 + | hypothetical protein Csac_1863 2005385 - 2007181 + | NADH dehydrogenase (quinone) Csac_1864 2007199 - 2008938 + | hydrogenase, Fe-only TERM 1967 2008999 - 2009020 + F 91 -3.7 -6.22802 | opp_overlap 2008999 AATCTTTTTAGAAAA GCTGGTT TTGTTGTC GACCAGC TTTTTTTTTATCAAA Csac_1865 2009152 - 2009751 + | maf protein TERM 1968 2010277 - 2010307 + G 74 -9.8 -2.67803 | overlap 2010265 2010274 2010273 CGCTTGGTGGTATTG TGACCAGCAAATCT TTG AGAATTGCTGGTGA TGAGTTTGATGAAGC Csac_1866 2009751 - 2010782 + | cell shape determining protein MreB TERM 1969 2011111 - 2011089 - g 70 -5.7 -4.52505 | AATAAAAAGTGAAAA CAAAAAGTT AAAAG AACTTCTTG GGCTTAAAAATCAAA Csac_1867 2010799 - 2011650 + | rod shape-determining protein MreC Csac_1868 2011652 - 2012176 + | hypothetical protein TERM 1970 2013233 - 2013253 + G 75 -9.7 -2.81547 | opp_overlap 2013232 2013231 2013236, overlap 2013236 AAAGATTCCCAAAGG CAACAGCAG GAG CAGCTGTTG TGATTGATGTAAAAA TERM 1971 2013955 - 2013937 - g 76 -10.4 -2.6176 | overlap 2013936 2013943 AAGGTTATTTACAAT TCAAAACC AAA GGTTTTGA GTAGGGTCAATATGT Csac_1869 2012173 - 2014278 + | peptidoglycan glycosyltransferase Csac_1870 2014294 - 2014950 + | septum site-determining protein MinC Csac_1871 2014980 - 2015780 + | septum site-determining protein MinD Csac_1872 2015793 - 2016095 + | cell division topological specificity factor MinE TERM 1972 2016241 - 2016253 + G 72 -4.1 -4.97824 | TAAGCTGGTAGTATC CCAAG TTA TTTGG TTTTGTTTAGGTTTT Csac_1873 2016095 - 2017204 + | rod shape-determining protein RodA TERM 1973 2017263 - 2017251 - g 70 -3.4 -4.98911 | CATGACAAAAAGAAA GAAC TCATG GTTC AGTTTGCTATAGCGT Csac_1874 2017215 - 2017640 + | methylglyoxal synthase Csac_1875 2017640 - 2018755 + | thiamin pyrophosphokinase, catalytic region Csac_1876 2018761 - 2019717 + | hypothetical protein Csac_1877 2019757 - 2020425 + | glycosyl transferase family protein Csac_1878 2020493 - 2021245 + | hypothetical protein Csac_1879 2021321 - 2022157 + | spermidine synthase Csac_1880 2022169 - 2023023 + | putative agmatinase TERM 1974 2023101 - 2023048 - f 80 -9.1 -3.70742 | gap 1, opp_overlap 2023051, overlap 2023050 2023051 AAAATGTGAACAGAA CACGGGTGTGACTAAATTTGCTCACC TTA AATGAG-AAATTTAGTCACGCCCTTT TTGCGTTTTTATACA TERM 1975 2023099 - 2023050 - f 91 -11.7 -3.4214 | gap 1, opp_overlap 2023051, overlap 2023048 2023051 AATGTGAACAGAACA CGGGTGTGACTAAATTTGCTCACC TTA AATGAG-AAATTTAGTCACGCCCT TTTTGCGTTTTTATA TERM 1976 2023051 - 2023098 + F 100 -16 -4.93595 | gap 1, opp_overlap 2023050 2023048 2023051 ATGTGAACAGAACAC GGGTGTGACTAAATTTGCTCA CCTTAAA TGAG-AAATTTAGTCACGCCC TTTTTGCGTTTTTAT TERM 1977 2023098 - 2023051 - f 100 -15.2 -2.64561 | gap 1, opp_overlap 2023051, overlap 2023050 2023048 ATGTGAACAGAACAC GGGTGTGACTAAATTTGCTCACC TTA AATGAG-AAATTTAGTCACGCCC TTTTTGCGTTTTTAT Csac_1881 2023231 - 2024775 + | carboxyl transferase TERM 1978 2024862 - 2024879 + F 77 -9.9 -2.61796 | overlap 2024861 ACAAGAGAAGAGCTT GCATGCA TCTG TGCATGC CTTGCTATGATTTTA Csac_1882 2025014 - 2025403 + | biotin/lipoyl attachment domain-containing protein Csac_1883 2025424 - 2026815 + | hypothetical protein TERM 1979 2027040 - 2027030 - g 73 -5.4 -4.63486 | ATTTCGTGAACAAAA GTCT CAA AGAC AAGAATATCATTGTG Csac_1884 2026942 - 2027106 + | hypothetical protein TERM 1980 2027547 - 2027563 + G 74 -3.7 -5.15117 | ATTGGAATTCGAAGT TCAGC TGCGCTT GCTGA TTTTTTAGGATTTTA Csac_1885 2027121 - 2027981 + | RpiR family transcriptional regulator Csac_1886 2027992 - 2028621 + | phosphoglycerate mutase TERM 1981 2028988 - 2028999 + G 91 -4.4 -5.78622 | GGTATAATGAGCATG TTGC AGTT GCAA TTTTTTTTGGAATAG Csac_1887 2028648 - 2029067 + | hypothetical protein Csac_1888 2029094 - 2029447 + | chorismate mutase TERM 1982 2029958 - 2029979 + G 79 -10.3 -3.16564 | opp_overlap 2029961, overlap 2029961 AAGGAAAAAGGCTAT GAAGTTGAT TATT ATCAACTTC TTGATGAGATAAAGC Csac_1889 2029463 - 2030143 + | cytidylate kinase TERM 1983 2030569 - 2030541 - g 76 -6.8 -4.45083 | gap 1, opp_overlap 2030540 GCCACAGTCATAAAA GCAACTGG-AGCA AAAG TGTTACCAGTTGC AATTTGTGGCAAGGT Csac_1890 2030133 - 2030732 + | phospholipid/glycerol acyltransferase TERM 1984 2031750 - 2031740 - g 72 -4 -4.94222 | AATAATTTACAAAAA TGAA ATT TTCA AAAATGCCAATGTAA Csac_1891 2030739 - 2032727 + | hydroxymethylbutenyl pyrophosphate reductase Csac_1892 2032829 - 2033197 + | hypothetical protein TERM 1985 2033370 - 2033385 + F 78 -9 -3.48081 | overlap 2033368 2033372 TAAGCTTTTGGGATA GGGAAG GGCT CTTCCC TCCTTTTTTATATAC TERM 1986 2033372 - 2033388 + F 76 -3.6 -5.38951 | overlap 2033370 2033368 AGCTTTTGGGATAGG GAAGGG CTCTT CCCTCC TTTTTTATATACCTT TERM 1987 2033436 - 2033414 - f 100 -10.8 -4.37092 | opp_overlap 2033419, overlap 2033400 2033419 ACCTTGTTTATAAAA CAAAACAAAA ATA TTTTGTTTTG AGGTGTTGTAATTGA TERM 1988 2033431 - 2033419 - f 79 -4.9 -5.18371 | opp_overlap 2033419, overlap 2033414 GTTTATAAAACAAAA CAAAA ATA TTTTG TTTTGAGGTGTTGTA TERM 1989 2034180 - 2034199 + G 73 -7.2 -4.17316 | CTGGGTATAATTACT GGTATTGG CAAT CTAATACC TTATTTTGGACCGAT Csac_1893 2033448 - 2034503 + | hypothetical protein Csac_1894 2034609 - 2037254 + | alanyl-tRNA synthetase Csac_1895 2037256 - 2037600 + | histidine triad (HIT) protein TERM 1990 2038172 - 2038195 + G 87 -11.8 -3.56366 | opp_overlap 2038171 2038172 2038174 TAGTTGAGCCACAAT TAGGGGTGAT GGTT GTCACCCCTA TTTGCCCCCATTCTT TERM 1991 2038195 - 2038172 - g 78 -11.1 -2.61582 | opp_overlap 2038172, overlap 2038171 2038174 TAGTTGAGCCACAAT TAGGGGTGA TGGTTG TCACCCCTA TTTGCCCCCATTCTT TERM 1992 2038193 - 2038174 - g 73 -9.3 -2.8474 | opp_overlap 2038172, overlap 2038172 2038171 GTTGAGCCACAATTA GGGGTGA TGGTTG TCACCCC TATTTGCCCCCATTC Csac_1896 2037640 - 2038422 + | ATP-NAD/AcoX kinase TERM 1993 2038767 - 2038741 - g 76 -7.8 -4.09276 | overlap 2038718 TAATAAAGACAATAA CAGGGGCTGCTC AGG GCGCTGCCGCTG CAATCGATTCACTGA Csac_1897 2038446 - 2038904 + | arginine repressor, ArgR TERM 1994 2039030 - 2039069 + G 81 -9.5 -3.72592 | opp_overlap 2039029 TCGATAATAATTGAC TCTCTTTCCTTGCTTTT AGGGAC AAAGGCAAGAAAGGAGA TTATTCGTACAAATT Csac_1898 2038910 - 2040565 + | DNA repair protein RecN TERM 1995 2040646 - 2040667 + F 81 -3.1 -5.8096 | opp_overlap 2040646 AGACGGTGTTACAAA TTGAAAAAA GTAG TATTTTCAA TTTTTCTTTTTTATC Csac_1899 2040646 - 2041884 + | peptidase S55, SpoIVB Csac_1900 2041966 - 2042769 + | response regulator receiver protein TERM 1996 2042861 - 2042847 - g 70 -2.8 -5.19261 | AAACTCATGAAAAAA GGATTA ATA TATTCC GCCCTTGTGCTATCA TERM 1997 2042948 - 2042979 + G 93 -12.4 -4.01184 | opp_overlap 2042948 TATAGTTGGAGACTA TGGGATAGGGTTGT ATCA ACTACCTTATCCCA TTTATACTACTATCT TERM 1998 2042979 - 2042948 - g 74 -10.2 -2.63301 | opp_overlap 2042948 TATAGTTGGAGACTA TGGGATAGGGTTGT ATCA ACTACCTTATCCCA TTTATACTACTATCT Csac_1901 2042838 - 2044361 + | polysaccharide biosynthesis protein Csac_1902 2044368 - 2045150 + | pyrroline-5-carboxylate reductase TERM 1999 2045346 - 2045332 - g 77 -10 -3.13908 | opp_overlap 2045320 AATTGAAGGATTGAA GGCTCT CAA AGAGCC TTGCAAAGTTACAGT Csac_1903 2045165 - 2045602 + | ribonuclease H Csac_1904 2045631 - 2046683 + | hypothetical protein Csac_1905 2046692 - 2047243 + | NUDIX hydrolase TERM 2000 2047705 - 2047715 + G 78 -5.4 -5.06414 | GCACATGCATTTACA CCTT ATA AAGG TTTTTATTCAGCAGC Csac_1906 2047240 - 2048391 + | hypothetical protein Csac_1907 2048408 - 2049109 + | alanine racemase domain-containing protein Csac_1908 2049123 - 2049560 + | hypothetical protein Csac_1909 2049593 - 2049868 + | protein of unknown function YGGT Csac_1910 2049841 - 2050674 + | RNA-binding S4 domain-containing protein Csac_1911 2050701 - 2051162 + | DivIVA family protein TERM 2001 2053176 - 2053157 - g 78 -5.8 -4.76802 | gap 1, opp_overlap 2053170, overlap 2053161 TCGAAAAATAAGAAA CACAGCAAG ATT CTTGCT-TG GCAATCTTTATGACT Csac_1912 2051190 - 2053952 + | isoleucyl-tRNA synthetase TERM 2002 2054552 - 2054538 - g 71 -7.2 -3.86897 | opp_overlap 2054537 2054542 CTCAGTTTTTAGAAA CACTTT CAA AAAGTG AAGTTTTATCTGGAA Csac_1913 2054033 - 2055118 + | 3-dehydroquinate synthase Csac_1914 2055674 - 2056906 + | hypothetical protein TERM 2003 2056924 - 2056949 + F 77 -3.9 -5.46698 | opp_overlap 2056926, overlap 2056927 ATTGATTAAGATAAC AGGGGCTGTCC AAAA GGACAGTCTTA TTTTTTACTTTTAAG TERM 2004 2056927 - 2056946 + F 100 -10 -4.78121 | opp_overlap 2056926, overlap 2056924 GATTAAGATAACAGG GGCTGTCC AAAA GGACAGTC TTATTTTTTACTTTT TERM 2005 2057006 - 2056978 - f 86 -9.9 -3.72073 | opp_overlap 2056985, overlap 2056985 AGTTATGAAAAGTAA GTAAAAATTATTT CAA AAATAATCTTTAC AAAATACTTTTTACT TERM 2006 2056999 - 2056985 - f 73 -4.4 -4.97312 | opp_overlap 2056985, overlap 2056978 AAAAGTAAGTAAAAA TTATTT CAA AAATAA TCTTTACAAAATACT Csac_1915 2057071 - 2057451 + | CopY family transcriptional regulator Csac_1916 2057459 - 2059012 + | peptidase M56, BlaR1 Csac_1917 2059133 - 2060290 + | hypothetical protein TERM 2007 2060635 - 2060621 - g 90 -2.9 -6.09196 | TGTAAAATAAAAAAA TTTGA TTTGC TCAAA TACAAAAATTATAAT Csac_1918 2060450 - 2061082 + | hypothetical protein Csac_1919 2061455 - 2063146 + | hypothetical protein TERM 2008 2063818 - 2063796 - g 70 -2.6 -5.08601 | opp_overlap 2063812, overlap 2063812 TGACTTGAACAAAAA CAGCAAGAAG AAG CTACTTTCCG AAAGATTTGGAGATA Csac_1920 2063143 - 2064351 + | hypothetical protein Csac_1921 2065330 - 2064680 - | hypothetical protein Csac_1922 2066606 - 2065341 - | hypothetical protein TERM 2009 2066309 - 2066287 - G 73 -6.4 -4.25283 | opp_overlap 2066286 2066282 2066289 AGCTTTTCATTAAAA TATTTTTTGG CTG CCAATAAATA GCTTATATATGCAGA TERM 2010 2066662 - 2066677 + r 74 -6.2 -4.46926 | TCTCAACACTTTACT TGTTAG CTTC CTAACA TTTTCTACTCACCTC TERM 2011 2066991 - 2066970 - R 70 -8.1 -3.14344 | TATTTCTTGCACCAA CCTTCTTGA GCGC TCAAGAAAG CATGTAACAGTTTTT TERM 2012 2067070 - 2067029 - R 77 -3.9 -5.49579 | gap 1, opp_overlap 2067036, overlap 2067031 2067036 TCATAAAAAATAAAA TATAAAACGGGGTACT-CAA TTC TTACAATACCCCGTTTTTTG ACAGACTACTTTTCT TERM 2013 2067068 - 2067031 - R 74 -6.5 -4.34916 | gap 1, opp_overlap 2067036, overlap 2067029 2067036 ATAAAAAATAAAATA TAAAACGGGGTACT-CAA TTC TTACAATACCCCGTTTTT TGACAGACTACTTTT TERM 2014 2067063 - 2067036 - R 82 -6.4 -5.00136 | gap 1, opp_overlap 2067036, overlap 2067031 2067029 AAATAAAATATAAAA CGGGGTACT-CAA TTC TTACAATACCCCG TTTTTTGACAGACTA Csac_1923 2068104 - 2067076 - | aIF-2BI family translation initiation factor TERM 2015 2068049 - 2068031 - G 71 -4.6 -4.88918 | opp_overlap 2068030 2068033 GTACTGCAAACAAAA TACTCTTT TTC AAAGGGTA ACTTTCTCTGGTCGA Csac_1924 2068886 - 2068113 - | methylthioadenosine phosphorylase TERM 2016 2068454 - 2068471 + g 75 -5.6 -4.87273 | TAATTCCAAGTTCTT TTGCAG ACTCAA CTGCAA TTTTTCTCAAATATT TERM 2017 2068730 - 2068745 + g 70 -2.5 -5.09225 | GATTCTTACCATGGC GTGGC AAAAAG GCTAC TTTTTTGCCTGCAAT Csac_1925 2068984 - 2069265 + | hypothetical protein Csac_1926 2069293 - 2069922 + | TraR/DksA family transcriptional regulator Csac_1927 2070023 - 2070475 + | lipoprotein signal peptidase Csac_1928 2070472 - 2071374 + | RluA family pseudouridine synthase TERM 2018 2071546 - 2071573 + F 100 -9.2 -5.60993 | opp_overlap 2071546 TAGTGTGTCAAAAAA GCTTCTTGCC AATTCACA GGCAGGAAGC TTTTTTTGTGCCAAA TERM 2019 2071573 - 2071546 - f 85 -7 -5.0133 | opp_overlap 2071546 TAGTGTGTCAAAAAA GCTTCTTGCC AATTCACA GGCAGGAAGC TTTTTTTGTGCCAAA Csac_1929 2071603 - 2072151 + | Uracil phosphoribosyltransferase TERM 2020 2072384 - 2072365 - g 76 -2.2 -5.4505 | TCTTGTAACAAAAAA CAAAATAC CTGC ATATCTTG GCTCTTCATTTGCAT TERM 2021 2073071 - 2073055 - g 73 -2.1 -5.26918 | opp_overlap 2073056, overlap 2073041 2073056 AGACTTTACAAAAAA TCCTGGG CTT CACAGGT CATTAGCAGGAGATG Csac_1930 2072180 - 2073553 + | uracil-xanthine permease TERM 2022 2073555 - 2073575 + F 95 -9 -5.24531 | opp_overlap 2073555 2073554 AACCAAATAATTAAG GGTAGGGG TATTT TCCCTACC TTTTTTGTAAACAGT Csac_1931 2073605 - 2074522 + | aspartate carbamoyltransferase Csac_1932 2074522 - 2075814 + | dihydroorotase, multifunctional complex type Csac_1933 2075808 - 2076725 + | orotidine 5'-phosphate decarboxylase carB 2076760 - 2079987 + | carbamoyl phosphate synthase large subunit Csac_1935 2079968 - 2080735 + | oxidoreductase FAD/NAD(P)-binding subunit Csac_1936 2080732 - 2081634 + | dihydroorotate dehydrogenase family protein TERM 2023 2081659 - 2081649 - g 78 -5.4 -4.99134 | opp_overlap 2081649 AGGTGAAAGCAAAAA TGTC GAA GACA GTTGTATATCTTATT Csac_1937 2081648 - 2082370 + | phosphoglycerate mutase pyrE 2082363 - 2082938 + | orotate phosphoribosyltransferase TERM 2024 2082983 - 2082942 - T 100 -14.8 -5.29846 | gap 2, opp_overlap 2082942 AAGGTGAAATAAAAA TACAGGGCTTT-TCCG-CAA ATTT TTGTCGGACAAAGCCCTGTA TTTTCCCTTAGAATG TERM 2025 2082942 - 2082983 + T 100 -14.8 -4.2803 | gap 2, opp_overlap 2082942 AAGGTGAAATAAAAA TACAGGGCTTT-TCCG-CAA ATTT TTGTCGGACAAAGCCCTGTA TTTTCCCTTAGAATG Csac_1939 2083704 - 2083000 - | ABC transporter related Csac_1940 2084467 - 2083697 - | ABC transporter related Csac_1941 2085404 - 2084469 - | inner-membrane translocator TERM 2026 2084542 - 2084531 - G 73 -7.2 -4.07568 | CTTTTGTGCCTAAAA GGCC CTGA GGCC TAAATAGCATAATGA Csac_1942 2086295 - 2085411 - | inner-membrane translocator TERM 2027 2086367 - 2086335 - R 73 -8.3 -3.54701 | opp_overlap 2086336 2086339, overlap 2086333 2086336 2086338 TAGAAATGAATAACA TGACGGAAGGGGCGA AGA TTGCCCCTTCCTCCT TTACTGGTTTATTTA TERM 2028 2086336 - 2086366 + r 100 -11.8 -3.93708 | opp_overlap 2086336 2086335 2086333 2086338, overlap 2086339 AGAAATGAATAACAT GACGGAAGGGGCGA AGA TTGCCCCTTCCTCC TTTACTGGTTTATTT TERM 2029 2086366 - 2086336 - R 87 -11.8 -2.71736 | opp_overlap 2086336 2086339, overlap 2086335 2086333 2086338 AGAAATGAATAACAT GACGGAAGGGGCGA AGA TTGCCCCTTCCTCC TTTACTGGTTTATTT TERM 2030 2086364 - 2086338 - R 83 -10.8 -2.88677 | opp_overlap 2086336 2086339, overlap 2086336 2086335 2086333 AAATGAATAACATGA CGGAAGGGGCGA AGA TTGCCCCTTCCT CCTTTACTGGTTTAT TERM 2031 2086339 - 2086363 + r 100 -16.5 -3.01022 | opp_overlap 2086338 2086336 2086335 2086333, overlap 2086336 AATGAATAACATGAC GGAAGGGGCGA AGA TTGCCCCTTCC TCCTTTACTGGTTTA Csac_1943 2087560 - 2086391 - | extracellular ligand-binding receptor TERM 2032 2087402 - 2087422 + g 71 -4.7 -4.62302 | overlap 2087404 TATCTCATCAATTGC AAGCTTCAG TCC TTGAAGCTC TTTTTGACCATATTG TERM 2033 2087404 - 2087420 + g 71 -7.3 -3.91908 | overlap 2087402 TCTCATCAATTGCAA GCTTCAG TCC TTGAAGC TCTTTTTGACCATAT Csac_1944 2087693 - 2088304 + | hypothetical protein TERM 2034 2088422 - 2088388 - f 71 -5.3 -4.64676 | gap 1, overlap 2088393 TGATTTTCAAGAAAA TATAATTGCACAAAAT AAAA ATTTTGTGCAATGA-A GGGAATGAGAAAATG TERM 2035 2088418 - 2088393 - f 100 -12.1 -4.0865 | overlap 2088388 TTCAAGAAAATATAA TTGCACAAAAT AAAA ATTTTGTGCAA TGAAGGGAATGAGAA TERM 2036 2089396 - 2089382 - g 81 -4.2 -5.40474 | overlap 2089383 AGCCTTTGAAAAAAA CCCCCT CTC AGGAGA AAATCAGGATACTTT xerC 2088435 - 2089421 + | site-specific tyrosine recombinase XerC Csac_1946 2089828 - 2089433 - | peptidoglycan-binding LysM Csac_1947 2090264 - 2089818 - | PilT domain-containing protein TERM 2037 2089969 - 2089957 - G 71 -4.9 -4.652 | opp_overlap 2089957, overlap 2089948 AAAGCATCCCAAAAA GATAT TTT ATATC TTTGTGAAAGCTTGA TERM 2038 2090119 - 2090109 - G 85 -4 -5.70522 | overlap 2090102 AACAACAACAAAAAA TTCT TGA AGAA CTTGAGTGCTCAAGG Csac_1948 2090499 - 2090251 - | CopG/DNA-binding domain-containing protein TERM 2039 2090686 - 2090660 - R 100 -9.5 -4.98857 | opp_overlap 2090662, overlap 2090662 ATGGAAGTATAAAAA TAGGGTGGAAT ATACA ATTCCACCCTT TTGTCTTCCTCATCT TERM 2040 2090684 - 2090662 - R 100 -12.1 -4.11322 | opp_overlap 2090662, overlap 2090660 GGAAGTATAAAAATA GGGTGGAAT ATACA ATTCCACCC TTTTGTCTTCCTCAT TERM 2041 2090662 - 2090684 + r 100 -12.1 -4.71186 | opp_overlap 2090662 2090660 GGAAGTATAAAAATA GGGTGGAAT ATACA ATTCCACCC TTTTGTCTTCCTCAT Csac_1949 2092101 - 2090707 - | glucuronate isomerase TERM 2042 2092223 - 2092199 - R 100 -13 -4.74012 | opp_overlap 2092199 ATTATAAAATGAAAA GAGGGAAAGT TCAAC ACTTTCCCTC TTTCTTTATTCCATT TERM 2043 2092199 - 2092223 + r 100 -13 -4.70117 | opp_overlap 2092199 ATTATAAAATGAAAA GAGGGAAAGT TCAAC ACTTTCCCTC TTTCTTTATTCCATT Csac_1950 2093579 - 2092275 - | phosphopyruvate hydratase TERM 2044 2093649 - 2093664 + r 87 -7.6 -4.84359 | TAATAAGCGAGCTTC CCTTCA TCTC TGAAGG TTTTTCTAACCCTAA Csac_1951 2095161 - 2093626 - | phosphoglyceromutase TERM 2045 2095082 - 2095114 + g 95 -13.5 -3.28712 | opp_overlap 2095068 2095088, overlap 2095088 AGGTTAGGGGTCTTA CCCAAAGCAACAGCG TTT CCCTCTTGCTTTGGG TTATAACCCCAACCG Csac_1952 2097140 - 2095188 - | phosphoglycerate kinase., Triose-phosphate isomerase TERM 2046 2096640 - 2096625 - G 71 -4.6 -4.72272 | overlap 2096626 TTTTTCCATCAAAAA TCCAGC AACT GCTGGT AAGAACTCTGCAACA TERM 2047 2096639 - 2096626 - G 70 -8.1 -3.43042 | overlap 2096625 TTTTCCATCAAAAAT CCAGC AACT GCTGG TAAGAACTCTGCAAC TERM 2048 2097163 - 2097177 + r 73 -4.4 -5.0538 | CTCACCTCGAAAATC TAAAAT ATA ATTTTA TTTTTTCAAATCAAG Csac_1953 2098270 - 2097257 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 2049 2098305 - 2098334 + r 87 -7.9 -4.75063 | opp_overlap 2098307 CTTTTTTATTTTTAA CACTGCAGCAA CATTAAGA TTGCAGCAGTG TTTTTACCCTTTTAT Csac_1954 2099360 - 2098338 - | DeoR family transcriptional regulator TERM 2050 2099504 - 2099470 - R 100 -12.3 -5.51402 | opp_overlap 2099470 ATACATGCAAAAAAA GCAGAGGAAGGCA ATTTGCTTG TACCTTCCTCTGC TTTTTGCACATAATA TERM 2051 2099470 - 2099504 + r 93 -10.1 -4.60487 | opp_overlap 2099470 ATACATGCAAAAAAA GCAGAGGAAGGCA ATTTGCTTG TACCTTCCTCTGC TTTTTGCACATAATA Csac_1955 2102175 - 2099524 - | pyruvate phosphate dikinase TERM 2052 2100375 - 2100399 + g 74 -4.3 -4.90002 | overlap 2100367 CAAAGTCGCTTCTTT GCATTGGAAGA AGC TTGTTCAATGC TTTTCTTCTCTGTTC Csac_1956 2103591 - 2102287 - | glycyl-tRNA synthetase TERM 2053 2103081 - 2103108 + g 84 -3.4 -5.67967 | overlap 2103082 CATTTCTAAACGACT TTCCTATTTGGG CAAT TCCAAAAGGGAG TTTTTTTCTCATGGT Csac_1957 2104371 - 2103637 - | DNA repair protein RecO Csac_1958 2105280 - 2104378 - | GTP-binding protein Era TERM 2054 2105130 - 2105162 + g 72 -7.8 -3.68394 | overlap 2105137 TTATCTGTGCATCAT CCAGGGTCAGTATT CCTTT AATACTGTTTCTGG TTGTCTGTGGTTTTG TERM 2055 2105946 - 2105925 - gR 85 -3 -5.93809 | overlap 2105926 2105943 TTTTGACAAAAAAAA GTGGGTTT ATAGAA AAACCCAT CAGTAGATCAAATGA TERM 2056 2105945 - 2105926 - gR 70 -6.5 -4.15201 | overlap 2105925 2105943 TTTGACAAAAAAAAG TGGGTTT ATAGAA AAACCCA TCAGTAGATCAAATG Csac_1960 2107445 - 2106225 - | aminotransferase, class I and II Csac_1959 2105405 - 2106283 + | RluA family pseudouridine synthase Csac_1961 2107930 - 2107442 - | AsnC family transcriptional regulator Csac_1962 2108517 - 2107927 - | hypothetical protein TERM 2057 2108236 - 2108254 + g 81 -5.3 -5.11613 | overlap 2108226 ACTCTTTGAATACTC GGTTTCA ACTTC TGAAGCC TTTTTTGAATAGTAT Csac_1963 2108750 - 2108514 - | hypothetical protein TERM 2058 2108605 - 2108615 + g 70 -5.4 -4.36089 | CATTCTGTCTCCCAC CGAA AAT TTCG TCTTTTTTTAACCTC Csac_1964 2109220 - 2108780 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Csac_1965 2110507 - 2109239 - | processing peptidase Csac_1966 2111096 - 2110521 - | heat shock protein DnaJ domain-containing protein Csac_1967 2111947 - 2111096 - | hypothetical protein Csac_1968 2112102 - 2112614 + | hypothetical protein TERM 2059 2112634 - 2112663 + T 88 -6.5 -5.38047 | opp_overlap 2112634 AATAAAAGAAAAAAA GTGGGCTGT TTTATTAAACTT ACAGCCCAC TTTTTTATATCAGTC TERM 2060 2112663 - 2112634 - T 100 -6.5 -6.17669 | opp_overlap 2112634 AATAAAAGAAAAAAA GTGGGCTGT TTTATTAAACTT ACAGCCCAC TTTTTTATATCAGTC Csac_1969 2113086 - 2112673 - | ATP synthase F1, epsilon subunit Csac_1970 2114511 - 2113108 - | F0F1 ATP synthase subunit beta TERM 2061 2113625 - 2113640 + g 75 -5.4 -4.8543 | opp_overlap 2113625, overlap 2113637 TAGATTGCTTGAACA GAGGTT ATTG AGCCTC TTTTTGTAGAGGTTA TERM 2062 2113839 - 2113853 + g 75 -8.6 -3.63991 | opp_overlap 2113838 CCATGGTAAGACCAG TGAGAG CAA CTCTCA TTCTTGCCCCTGGTG TERM 2063 2114362 - 2114376 + g 75 -10 -2.82623 | overlap 2114359 GCGAACAGTGTCATT GCCCAA ATG TTGGGC TACTTCTGCAACAAG Csac_1971 2115431 - 2114553 - | ATP synthase F1, gamma subunit TERM 2064 2115081 - 2115051 - G 74 -4.8 -4.82901 | opp_overlap 2115052 2115073, overlap 2115052 GTGGCGTGATAAAAA GTTTTTGCCAACAG TGC CTATTGGGAAAAAT ATTACTTCTCCCTTA TERM 2065 2115080 - 2115052 - G 72 -8.3 -3.49419 | opp_overlap 2115052 2115073, overlap 2115051 TGGCGTGATAAAAAG TTTTTGCCAACAG TGC CTATTGGGAAAAA TATTACTTCTCCCTT Csac_1972 2116967 - 2115444 - | ATP synthase F1, alpha subunit Csac_1973 2117522 - 2116983 - | ATP synthase F1, delta subunit Csac_1974 2118016 - 2117525 - | ATP synthase F0, B subunit TERM 2066 2118099 - 2118123 + r 70 -7.1 -3.71649 | opp_overlap 2118096 2118099 AAAATAAAGAGATGA CGCTCCCCA AGCCATC TGGAGAGCG TTTAAACTTTCAAAA TERM 2067 2118123 - 2118099 - R 79 -10 -2.88216 | opp_overlap 2118099, overlap 2118096 AAAATAAAGAGATGA CGCTCCCCAA GCCAT CTGGAGAGCG TTTAAACTTTCAAAA Csac_1975 2118337 - 2118125 - | ATP synthase F0, C subunit Csac_1976 2119039 - 2118359 - | F0F1 ATP synthase subunit A Csac_1977 2119428 - 2119048 - | hypothetical protein TERM 2068 2119162 - 2119140 - G 76 -6.4 -4.53602 | overlap 2119144 TCCAGATGAAATAAA CAAATCTTAC ATT GTAAAACTTG AAGATAAAAGCAGAT guaA 2121035 - 2119500 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 2069 2120390 - 2120403 + g 70 -5.3 -4.43624 | opp_overlap 2120381 CACATACAACCTTTT GATTG CCCA CAATC TTTCTTATCTCATTT Csac_1979 2122147 - 2121062 - | auxin efflux carrier Csac_1980 2122209 - 2123156 + | transposase, IS4 family protein TERM 2070 2123236 - 2123218 - T 95 -4.5 -6.30182 | TTATATAAAAAAAAA GTGCCAT TTTAC AAGGCAC CCTATTCACTAATTT Csac_1981 2123852 - 2123238 - | hypothetical protein TERM 2071 2123727 - 2123746 + g 90 -3.6 -5.8096 | GGTCTGTGTAGTTTT TGGTATTT CGGA AGATGCCA TTTTTGTTTTTTCTA Csac_1982 2124003 - 2125217 + | beta-lactamase domain-containing protein TERM 2072 2126286 - 2126275 - g 70 -3 -5.24531 | ATGGTTTATAAAAAA TTTG TGGT CAAA AACAAAAGATTAATC Csac_1983 2125222 - 2126406 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2073 2126407 - 2126453 + T 88 -6.2 -5.51402 | gap 3, opp_overlap 2126411, overlap 2126411 CTTGAGATAAAATAA AAAAGGGGC-TTTAC-ACC-CTT CACT AAGCGGTTGTAAATGCCCCTTTA TTTTTTTGCATATAT TERM 2074 2126411 - 2126449 + T 88 -7 -5.21683 | gap 3, opp_overlap 2126411, overlap 2126407 AGATAAAATAAAAAA GGGGC-TTTAC-ACC-CTT CACT AAGCGGTTGTAAATGCCCC TTTATTTTTTTGCAT TERM 2075 2126449 - 2126411 - T 100 -7 -5.8901 | gap 3, opp_overlap 2126411 2126407 AGATAAAATAAAAAA GGGGC-TTTAC-ACC-CTT CACT AAGCGGTTGTAAATGCCCC TTTATTTTTTTGCAT Csac_1984 2129279 - 2126451 - | excinuclease ABC, A subunit TERM 2076 2127903 - 2127889 - G 70 -2.8 -5.17353 | overlap 2127891 ACATCTATCAAAAAA TCCAGC CTT GCTAAA ATCTCTTTCAAAATT Csac_1985 2131289 - 2129304 - | excinuclease ABC subunit B TERM 2077 2131076 - 2131032 - G 81 -4.3 -5.26918 | overlap 2131069 ATAGCTTACAAAAAA CTCTACAGCGTTTTCAGGAAA GAA CTCCCTAAACTCACTGCAAAG CTGAGCAGCCAGTGT Csac_1986 2131934 - 2131371 - | lytic transglycosylase, catalytic TERM 2078 2131746 - 2131762 + g 78 -3.7 -5.29445 | AGAGACTGCAAATTG GTTAAAG TTG CTTTCAC TTTTTATTATTGCAC Csac_1987 2132530 - 2131931 - | dephospho-CoA kinase Csac_1988 2135066 - 2132517 - | DNA polymerase I TERM 2079 2133639 - 2133651 + g 73 -3.3 -5.16151 | AATCTCTTTTGTATA CTCCT GCA AGGTG TTTTTGTTAACTTTA TERM 2080 2133952 - 2133969 + g 70 -2.7 -5.1101 | opp_overlap 2133952 2133954, overlap 2133954 TAAGTATCACCAAAA TCTACTC TATG GAGTATA TTTTTTAAATCATAC Csac_1989 2136361 - 2135063 - | hypothetical protein TERM 2081 2136153 - 2136185 + g 81 -8.7 -4.01747 | AGACCGTTTTGGCCT TTTTGAAGTTTTG GCATGAA CAAGACTTCAAAA TCTTTTATATTTACT TERM 2082 2136450 - 2136414 - R 100 -9.6 -4.96762 | overlap 2136440 TATACATCATAAAAA TGCCCTAAGTCATC AAACTTTAA AACGACTTAGGGCA CAAGTCTTAGAAGCT Csac_1990 2136627 - 2136469 - | rubredoxin-type Fe(Cys)4 protein Csac_1991 2137968 - 2136706 - | phosphoribosylamine--glycine ligase Csac_1992 2139542 - 2138001 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 2083 2139458 - 2139471 + g 76 -3.1 -5.4148 | CGCCGGTTGAAATAA TTTCG TATC CGAGA TTTTTTAGTTCTTTA Csac_1993 2140194 - 2139535 - | phosphoribosylglycinamide formyltransferase TERM 2084 2140119 - 2140100 - G 78 -9.4 -3.57651 | opp_overlap 2140098, overlap 2140095 TTTGAGATTACACAA GAGATTTG TGCA CAAATCTC GCCATTTTTGATAGC Csac_1994 2141216 - 2140191 - | phosphoribosylformylglycinamidine cyclo-ligase Csac_1995 2142643 - 2141219 - | amidophosphoribosyltransferase TERM 2085 2142409 - 2142431 + g 100 -15 -3.1485 | opp_overlap 2142404 TCGCTGAAGATCCTT TGAGGTGGTT CAA AACCACCTCA TTAAATACTTCATTA Csac_1996 2144817 - 2142625 - | phosphoribosylformylglycinamidine synthase II Csac_1997 2145519 - 2144824 - | phosphoribosylformylglycinamidine synthase I Csac_1998 2145771 - 2145523 - | phosphoribosylformylglycinamidine synthase, purS Csac_1999 2146520 - 2145810 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 2086 2146616 - 2146638 + r 100 -10.6 -5.67063 | opp_overlap 2146616 TTCTAAGTTTTAAAA GGGGAGCA TTATCTT TGCTCCCC TTTTTTTCTAATGGG TERM 2087 2146638 - 2146616 - R 91 -10.6 -4.14392 | opp_overlap 2146616 TTCTAAGTTTTAAAA GGGGAGCA TTATCTT TGCTCCCC TTTTTTTCTAATGGG Csac_2000 2148034 - 2146646 - | xanthine/uracil/vitamin C permease TERM 2088 2148228 - 2148197 - R 100 -6.6 -5.64274 | opp_overlap 2148197 TTATTTACAAAAAAA GAGACCATCATC TTTCCTCT GGTGATGGCCTC TTTTTTGGCAATTTA TERM 2089 2148197 - 2148228 + r 85 -6.6 -5.07107 | opp_overlap 2148197 TTATTTACAAAAAAA GAGACCATCATC TTTCCTCT GGTGATGGCCTC TTTTTTGGCAATTTA Csac_2001 2149481 - 2148258 - | 2-alkenal reductase TERM 2090 2148946 - 2148968 + g 81 -9.2 -3.66908 | TCACTGAGTGCATCT GTTCCAACAA TTG TTGCTGGAAC TTCCTTTTCACCCGA Csac_2002 2150980 - 2149577 - | integral membrane sensor signal transduction histidine kinase Csac_2003 2151677 - 2151006 - | two component transcriptional regulator Csac_2004 2152671 - 2151694 - | AIR synthase-like protein TERM 2091 2151825 - 2151844 + g 76 -5 -5.0065 | overlap 2151817 CAATTCCCTTCTCTT TGAGCTCA CAGA TAAGCTCA TTTTCTTTATCAGTA TERM 2092 2152650 - 2152664 + g 73 -7.2 -4.13767 | opp_overlap 2152652 CCTTTAATATTTCAA TAGGAA TTT TTCCTA TTTTCAAATAAAAGA Csac_2005 2153056 - 2152697 - | hypothetical protein Csac_2006 2153639 - 2153103 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Csac_2007 2154377 - 2153733 - | single-strand DNA-binding protein Csac_2008 2155036 - 2154449 - | hypothetical protein Csac_2009 2155870 - 2155094 - | polysaccharide deacetylase TERM 2093 2155931 - 2155973 + r 72 -5.8 -4.4784 | gap 1, opp_overlap 2155925 2155934, overlap 2155934 GGAAAACAATATGCA AAAGAGGAGAGCTCCAAAT ATCTCA ATTT-GAACTCTCCTCTTC TTTATTTCCGGTTTC TERM 2094 2155970 - 2155934 - R 90 -9.7 -4.32951 | gap 1, opp_overlap 2155934 2155931, overlap 2155925 AAACAATATGCAAAA GAGGAGAGCTCCAAAT ATCTCA ATTT-GAACTCTCCTC TTCTTTATTTCCGGT TERM 2095 2155934 - 2155970 + r 80 -7.5 -4.33281 | gap 1, opp_overlap 2155925 2155934, overlap 2155931 AAACAATATGCAAAA GAGGAGAGCTCCAAAT ATCTCA ATTT-GAACTCTCCTC TTCTTTATTTCCGGT Csac_2010 2156390 - 2155953 - | hypothetical protein TERM 2096 2156222 - 2156232 + g 70 -5.4 -4.47888 | overlap 2156219 AAAACTCCTCTTCAA GCTT GCT AAGC TTCTTTTTCAATTCC Csac_2011 2157302 - 2156469 - | UBA/THIF-type NAD/FAD binding protein TERM 2097 2157262 - 2157241 - G 78 -3.7 -5.40873 | AAGATAAAAATAAAA GACCCAT TTAAATTT ATGGGCC TTTGTGCACTTTTTT Csac_2012 2158527 - 2157532 - | putative CoA-substrate-specific enzyme activase Csac_2013 2159590 - 2158496 - | hypothetical protein Csac_2014 2160494 - 2159562 - | hypothetical protein TERM 2098 2160050 - 2160036 - GR 79 -5 -5.18561 | overlap 2160037 CAAATATTCAAAAAA CTTGCT ATT AGCAAA GCCTTCTACAATCTT TERM 2099 2160593 - 2160583 - R 73 -4.6 -4.94703 | AATACAAAAAAACAA GGGA CTG CCCC ACAAGATGAACTGAC Csac_2015 2161111 - 2160662 - | DNA-(apurinic or apyrimidinic site) lyase Csac_2016 2161386 - 2161874 + | GCN5-related N-acetyltransferase Csac_2017 2163423 - 2161852 - | integral membrane protein MviN TERM 2100 2162471 - 2162454 - G 73 -2 -5.29445 | overlap 2162455 TGCTAAGAATAAAAA CTCCAA ATGTAA TTGGAA TCATTATCAAAATTA TERM 2101 2163280 - 2163261 - G 100 -7 -5.75342 | overlap 2163262 TGCTTGCAAAAAAAA CGCCCGGC AACA GCTGGGCA GCAATTAGTGAATCT TERM 2102 2163279 - 2163262 - G 79 -8.3 -4.04482 | overlap 2163261 GCTTGCAAAAAAAAC GCCCGGC AACA GCTGGGC AGCAATTAGTGAATC Csac_2018 2164523 - 2163444 - | mannose-1-phosphate guanylyltransferase (GDP) TERM 2103 2164237 - 2164259 + g 76 -9.2 -3.3539 | overlap 2164233 TTTTTAATCTTTAGT GCTGCATATA AAA TACATGCAGC TGTATTTCTGCCTAT Csac_2019 2165247 - 2164630 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein Csac_2020 2166001 - 2165249 - | imidazoleglycerol phosphate synthase, cyclase subunit TERM 2104 2165349 - 2165326 - G 90 -7.4 -5.1166 | overlap 2165327 CACCAAAATGAAAAA TTGACGCAGC CAGT GCTGCATCAG CACCCACTTTGAAAA TERM 2105 2165348 - 2165327 - G 88 -10.9 -3.65369 | overlap 2165326 ACCAAAATGAAAAAT TGACGCAGC CAGT GCTGCATCA GCACCCACTTTGAAA Csac_2021 2166741 - 2166028 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Csac_2022 2167349 - 2166738 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Csac_2023 2167930 - 2167346 - | imidazoleglycerol-phosphate dehydratase Csac_2024 2168982 - 2167933 - | aminotransferase, class I and II Csac_2025 2170294 - 2168975 - | histidinol dehydrogenase TERM 2106 2169132 - 2169121 - GR 76 -7.2 -4.2408 | TGACAAAATCATAAA CGCC AAGA GGCG AGAAAAATCGGGCAG TERM 2107 2169732 - 2169757 + gr 83 -6.9 -4.72277 | opp_overlap 2169736, overlap 2169734 ATTTTGTTTACTCCA CATATCTTGGC AGCT GCCAAGGTATA TTTATTTATCTTCTT TERM 2108 2169734 - 2169755 + gr 83 -9.5 -3.94393 | opp_overlap 2169736, overlap 2169732 TTTGTTTACTCCACA TATCTTGGC AGCT GCCAAGGTA TATTTATTTATCTTC Csac_2026 2170896 - 2170267 - | ATP phosphoribosyltransferase Csac_2027 2172065 - 2170899 - | histidine--tRNA ligase TERM 2109 2172182 - 2172159 - R 77 -3.1 -5.52096 | AAATGCAACAAAAAA GTGGAGC TAAAAAACCC GCCCCAC TTTAATGCTCAGATT Csac_2028 2172724 - 2172191 - | hypothetical protein TERM 2110 2172690 - 2172670 - G 72 -3.9 -5.04377 | overlap 2172672 2172679 2172680 TCAAAACAAAATAAA GTGCAGC AATCAAG GCTGCCC TTGCAATAACCTGAA Csac_2029 2173398 - 2172736 - | phosphate uptake regulator, PhoU TERM 2111 2173190 - 2173210 + g 73 -3.4 -5.08178 | gap 1 GCAAGAGGCTGCTGA GT-TGCAAT TACA ATTGCACAC TTTTTCTCTATCTCT Csac_2030 2174175 - 2173426 - | phosphate ABC transporter, ATPase subunit Csac_2031 2174398 - 2175024 + | hypothetical protein Csac_2032 2175017 - 2176015 + | phosphate transporter Csac_2033 2177764 - 2176067 - | integral membrane sensor signal transduction histidine kinase Csac_2034 2178466 - 2177768 - | two component transcriptional regulator Csac_2035 2179257 - 2178466 - | hypothetical protein TERM 2112 2179312 - 2179289 - R 81 -3.1 -5.85011 | opp_overlap 2179290 2179291, overlap 2179291 TAAAAACTAAAAAAA TAGCAACCT ACAAAG AGGTTGCCT TTAGTTTTTCTTGGG TERM 2113 2179310 - 2179291 - R 82 -7.9 -4.51121 | opp_overlap 2179290 2179291, overlap 2179289 AAAACTAAAAAAATA GCAACCT ACAAAG AGGTTGC CTTTAGTTTTTCTTG Csac_2036 2179966 - 2179313 - | putative translaldolase Csac_2037 2181339 - 2180044 - | FolC bifunctional protein TERM 2114 2181136 - 2181110 - G 80 -8.8 -3.8374 | opp_overlap 2181113, overlap 2181113 TTAAAAAATTCTAAA TAAGGTGAGG TGTAAAG CCCCACCTTA TACCCAGCTTCAATC TERM 2115 2181184 - 2181220 + g 77 -8.1 -3.9318 | AGCACATGTTGATCC TTTGCCATTTGTTCCTG CAA CATGAACAATTCGCAAA TCTTTTTGAGGGTTT valS 2183971 - 2181347 - | valyl-tRNA synthetase Csac_2039 2184125 - 2184502 + | desulfoferrodoxin TERM 2116 2184542 - 2184507 - T 93 -6.2 -5.61689 | gap 1, opp_overlap 2184511, overlap 2184511 AAAAGGAATAAAAAA GACAGGGCTGCTTTAAT TTA AACAGAGCAGCCCT-TC TTCAATGTTATTTTT TERM 2117 2184511 - 2184539 + T 75 -8.2 -3.75144 | opp_overlap 2184507 2184511 GGAATAAAAAAGACA GGGCTGCTTT AATTTAAAC AGAGCAGCCC TTCTTCAATGTTATT TERM 2118 2184539 - 2184511 - T 77 -8.1 -3.77157 | opp_overlap 2184511, overlap 2184507 GGAATAAAAAAGACA GGGCTGCTTTAAT TTA AACAGAGCAGCCC TTCTTCAATGTTATT Csac_2040 2185749 - 2184550 - | acetate kinase Csac_2041 2186804 - 2185773 - | phosphate acetyltransferase TERM 2119 2185978 - 2185997 + g 78 -7.8 -4.35524 | overlap 2185964 ACATTTGCCTGCCCT GCAACAGG GCTG CCTGGTGC TTTTAACTTTGCAAC TERM 2120 2186330 - 2186320 - G 73 -5.4 -4.59944 | opp_overlap 2186320 ACCATTATAAAGAAA CTTG AAA CAAG CTTTACACCTGGTGC TERM 2121 2186590 - 2186606 + g 71 -5.1 -4.69962 | overlap 2186587 GCCTCATCTACATTT GCACCAA ACT TTGCTGC TTCTTTTTTAATCTC Csac_2042 2186974 - 2187582 + | SOS-response transcriptional repressor, LexA TERM 2122 2187566 - 2187603 + T 100 -15.9 -3.70076 | opp_overlap 2187562 2187560, overlap 2187569 GAAAGGTAATAGGCC TTATTAGGAGGATGTAA GAAT TTACATCCTCCTAATCA TTTCAATAGCTTTCA TERM 2123 2187569 - 2187600 + T 100 -17.6 -2.94888 | opp_overlap 2187562 2187560, overlap 2187566 AGGTAATAGGCCTTA TTAGGAGGATGTAA GAAT TTACATCCTCCTAA TCATTTCAATAGCTT Csac_2043 2188861 - 2187587 - | aluminium resistance family protein TERM 2124 2188689 - 2188700 + g 77 -3 -5.44119 | TTGTTCAAATGTGTA TAAG AAAG CTTA TTTTTTTGAAATGCA TERM 2125 2188943 - 2188900 - R 100 -14.3 -5.00884 | opp_overlap 2188905 2188909 2188939 ACTTGCTTTAAAAAA TTAAAGAAAGCTCATGA TTTTAAAGTC TCATGAGCTTTCTTTAA AGAGAATTTTAAACC TERM 2126 2188905 - 2188938 + r 80 -9.8 -3.55203 | opp_overlap 2188900, overlap 2188909 CTTTAAAAAATTAAA GAAAGCTCATGA TTTTAAAGTC TCATGAGCTTTC TTTAAAGAGAATTTT Csac_2044 2189262 - 2188963 - | RNA chaperone Hfq TERM 2127 2189137 - 2189157 + g 76 -9.9 -2.9732 | opp_overlap 2189137, overlap 2189134 TACCACCAATGTAAA GTTATCAAA ACC TTTGATAAC TCCTTTCAATTGGAA TERM 2128 2189157 - 2189137 - G 84 -9.9 -3.79043 | opp_overlap 2189137 2189134 TACCACCAATGTAAA GTTATCAAA ACC TTTGATAAC TCCTTTCAATTGGAA Csac_2045 2190265 - 2189327 - | tRNA delta(2)-isopentenylpyrophosphate transferase Csac_2046 2192102 - 2190303 - | DNA mismatch repair protein MutL Csac_2047 2194690 - 2192099 - | DNA mismatch repair protein MutS TERM 2129 2194502 - 2194513 + g 80 -5.8 -5.04356 | opp_overlap 2194475, overlap 2194476 ATGATAAGGAACCCC GCAC ATAG GTGC TTTTTCATTATTTCC Csac_2048 2196109 - 2194694 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 2130 2195394 - 2195425 + g 75 -7.4 -4.33165 | gap 1, opp_overlap 2195394 AAATCTTTACCATAA GAGTTCACATT-CTG TCC CAGGAGTGTGACCTC TTTTACTCCATTTGC TERM 2131 2195932 - 2195947 + g 76 -6.2 -4.60487 | CATACCCCATTGCAT TTAGCA TTCC TGCTAA TTTTTCAGAATCATG Csac_2049 2196278 - 2196475 + | small acid-soluble spore protein, alpha/beta type TERM 2132 2196508 - 2196483 - T 100 -8.3 -5.52023 | gap 1, opp_overlap 2196484, overlap 2196484 AGCAGTAACAAAAAA CGGCAG-AGGGA AAT TCCCTTCTGCCT TTCACTTTATTCAGA TERM 2133 2196507 - 2196484 - T 100 -11.8 -3.89587 | gap 1, opp_overlap 2196484, overlap 2196483 GCAGTAACAAAAAAC GGCAG-AGGGA AAT TCCCTTCTGCC TTTCACTTTATTCAG TERM 2134 2196484 - 2196507 + T 100 -11.8 -3.93262 | gap 1, opp_overlap 2196484 2196483 GCAGTAACAAAAAAC GGCAG-AGGGA AAT TCCCTTCTGCC TTTCACTTTATTCAG Csac_2050 2196964 - 2196533 - | amino acid-binding ACT domain-containing protein TERM 2135 2196913 - 2196929 + g 76 -6.6 -4.36914 | overlap 2196900 2196909 TGCTTGTTACCTCAG CAAGTC TTCCT GACTTG TTTTCTAAAAACACA Csac_2051 2198306 - 2197026 - | phenylacetate--CoA ligase Csac_2052 2198922 - 2198335 - | indolepyruvate ferredoxin oxidoreductase TERM 2136 2198425 - 2198437 + g 74 -4.9 -4.72631 | ATTATTTTCTATAGC CTTTT TAA AAAAG TTTTCTTCAATTCCT Csac_2053 2200663 - 2198930 - | thiamine pyrophosphate binding domain-containing protein TERM 2137 2199637 - 2199627 - G 73 -6.8 -4.24654 | AAAACGTAAAAAATA CCTC TGT GAGG ACAGCCAGGACACAA Csac_2054 2201998 - 2200697 - | phenylacetate--CoA ligase TERM 2138 2201700 - 2201713 + g 76 -6.7 -4.371 | TCATGTTTGGTATAT CCTAC AACT GTAGG TTTTCCTGTCGTACC TERM 2139 2202157 - 2202123 - R 85 -5.1 -5.67283 | opp_overlap 2202123 AAGGCAAATAAAAAA GGGCTACCTCA TTTAACTTTCCTT TGAGATAGCCC TACTTTATTATAACA Csac_2055 2204751 - 2202157 - | ATPase TERM 2140 2204791 - 2204822 + r 73 -8 -3.41378 | opp_overlap 2204791 2204794, overlap 2204790 2204794 TTTTTCACAATAAAA CAATCAGGGAAGGT TATT GCCTTCCCTGATCA CTTTTATTCGATGTC TERM 2141 2204822 - 2204791 - R 100 -11.7 -4.77165 | opp_overlap 2204791 2204790 2204794, overlap 2204794 TTTTTCACAATAAAA CAATCAGGGAAGG TTATTG CCTTCCCTGATCA CTTTTATTCGATGTC TERM 2142 2204819 - 2204794 - R 100 -13.4 -4.49377 | opp_overlap 2204794 2204791 2204790, overlap 2204791 TTCACAATAAAACAA TCAGGGAAGG TTATTG CCTTCCCTGA TCACTTTTATTCGAT TERM 2143 2204794 - 2204819 + r 100 -14.1 -2.85242 | opp_overlap 2204791 2204794, overlap 2204791 2204790 TTCACAATAAAACAA TCAGGGAAGGT TATT GCCTTCCCTGA TCACTTTTATTCGAT Csac_2056 2205272 - 2204826 - | heat shock protein Hsp20 TERM 2144 2205340 - 2205323 - R 73 -7.7 -3.5936 | opp_overlap 2205317 TGGAAAGTTTTCAAA GTGGCAA ACCA TCGCCAC TTGCAATTTGATTTT Csac_2057 2205947 - 2205486 - | transcriptional regulator NrdR Csac_2058 2207617 - 2205944 - | diguanylate cyclase TERM 2145 2206358 - 2206368 + g 72 -4 -4.91429 | AAATAGTGCAATACT GATA GGA TATC TTTTGTTTGAAGTTT TERM 2146 2206944 - 2206934 - G 75 -5.4 -4.81249 | overlap 2206935 TTGCAAATTGAAAAA CTCT CCA AGAG AAATATTTAGTCTTT TERM 2147 2207783 - 2207802 + r 100 -10.8 -4.7254 | opp_overlap 2207783 GTCCACAAAAAAAAA GTACCCTT TAAA AAGGGTAC TTTTTAATAAAGACT TERM 2148 2207802 - 2207783 - R 100 -10.8 -6.22802 | opp_overlap 2207783 GTCCACAAAAAAAAA GTACCCTT TAAA AAGGGTAC TTTTTAATAAAGACT Csac_2059 2209062 - 2207839 - | malate dehydrogenase Csac_2060 2210441 - 2209107 - | recombination factor protein RarA TERM 2149 2209615 - 2209639 + g 75 -7.1 -4.25104 | opp_overlap 2209615 2209613 AGATAAAATAAAGCA GCGTCAGGG TCAGAAC CCCTTACGC TTTTGATAAACGCCG TERM 2150 2210351 - 2210399 + g 79 -3.2 -5.51165 | gap 1, opp_overlap 2210354, overlap 2210354 TATGCTCTTGCCCGA CAATCTCCTCAAGCCGTTTAGGT CTTA ACTTATACG-CAAGAGGAGATTC TTTTTTTAGCCTTTT TERM 2151 2210354 - 2210396 + g 74 -4.9 -4.80853 | gap 1, opp_overlap 2210354, overlap 2210351 GCTCTTGCCCGACAA TCTCCTCAAGCCGTTTAGGT CTTA ACTTATACG-CAAGAGGAGA TTCTTTTTTTAGCCT Csac_2061 2211718 - 2210465 - | serine hydroxymethyltransferase Csac_2062 2211948 - 2212700 + | hypothetical protein TERM 2152 2212955 - 2212925 - g 76 -10 -3.07895 | opp_overlap 2212924 2212935, overlap 2212935 TTGATGGTGAATATA TTTTCAGAAATCTT TGC AAGACTTCTAAAAA ATCCTGTCCCAATCT Csac_2063 2212739 - 2213176 + | hypothetical protein TERM 2153 2213226 - 2213182 - T 100 -6.6 -5.95539 | opp_overlap 2213187 2213191, overlap 2213187 TGGGAAATAAAAAAA TAAAAGAAAGCATAAGCCAC TTTTT ATGGTTTATGCTTTCTTTGT TATTTTGCCTTTCGC TERM 2154 2213221 - 2213187 - T 100 -10.9 -5.64328 | opp_overlap 2213187 2213191, overlap 2213182 AATAAAAAAATAAAA GAAAGCATAAGCCAC TTTTT ATGGTTTATGCTTTC TTTGTTATTTTGCCT TERM 2155 2213187 - 2213221 + T 100 -12.4 -4.68601 | opp_overlap 2213187 2213182, overlap 2213191 AATAAAAAAATAAAA GAAAGCATAAGCCA CTTTTTA TGGTTTATGCTTTC TTTGTTATTTTGCCT TERM 2156 2213191 - 2213217 + T 86 -7.4 -4.84246 | opp_overlap 2213187 2213182, overlap 2213187 AAAAAATAAAAGAAA GCATAAGCCA CTTTTTA TGGTTTATGC TTTCTTTGTTATTTT Csac_2064 2215331 - 2213226 - | polynucleotide phosphorylase/polyadenylase TERM 2157 2215356 - 2215378 + r 90 -9.1 -4.55625 | opp_overlap 2215357, overlap 2215357 CCTCTTTCTAAAATA ATGGAGCGG CTACA CCGCTCCAC TTTTGTGATCTTACT TERM 2158 2215377 - 2215357 - R 100 -13.3 -4.17048 | opp_overlap 2215356 2215357 CTCTTTCTAAAATAA TGGAGCGGC TAC ACCGCTCCA CTTTTGTGATCTTAC TERM 2159 2215357 - 2215377 + r 90 -12.6 -3.32291 | opp_overlap 2215357, overlap 2215356 CTCTTTCTAAAATAA TGGAGCGG CTACA CCGCTCCA CTTTTGTGATCTTAC rpsO 2215655 - 2215389 - | 30S ribosomal protein S15 TERM 2160 2215594 - 2215617 + g 74 -4.6 -4.96646 | opp_overlap 2215591 ACCTCTGGAGAACCT GTGTCAGATT CATG AAGCTGATAC TTTTTGATTATCTCC TERM 2161 2215736 - 2215685 - R 76 -8.8 -3.53012 | overlap 2215686 2215704 CTTTTCCTTTTTAAA TGCCTGAATCTTTGTTAAAGGCTG GGAG CATCCTCTAACAAGGACTCAGGTT AGCACATAGCATATT TERM 2162 2215735 - 2215686 - R 89 -12.3 -2.71712 | overlap 2215685 2215704 TTTTCCTTTTTAAAT GCCTGAATCTTTGTTAAAGGCTG GGAG CATCCTCTAACAAGGACTCAGGT TAGCACATAGCATAT Csac_2066 2216692 - 2215775 - | riboflavin biosynthesis protein RibF TERM 2163 2216092 - 2216103 + g 78 -5.8 -4.83615 | opp_overlap 2216092 2216091 ATTCTATATTAAGAG TGGG AAAA CCCA TTTTTCTGCCCAATC Csac_2067 2217552 - 2216689 - | tRNA pseudouridine synthase B TERM 2164 2216768 - 2216756 - G 88 -3.4 -5.95539 | opp_overlap 2216756 TTGTAAACAAAAAAA GCAT CTTTC ATGC TGATTTTATAAAAAT TERM 2165 2217229 - 2217215 - G 71 -8.6 -3.14745 | opp_overlap 2217211, overlap 2217211 TTTGCAGAATAGATA GGAACT GAA AGTTCC ACCTCTCCTTTTAAG Csac_2068 2218505 - 2217549 - | phosphoesterase domain-containing protein Csac_2069 2218909 - 2218502 - | ribosome-binding factor A Csac_2070 2221510 - 2218934 - | translation initiation factor IF-2 TERM 2166 2221078 - 2221090 + g 80 -6.3 -5.07107 | CAACAGCCTTTCTCT CTTGA CCC TCAAG TTTTTTGCCACTTTC Csac_2071 2221794 - 2221507 - | hypothetical protein Csac_2072 2222883 - 2221813 - | NusA antitermination factor Csac_2073 2223367 - 2222912 - | hypothetical protein TERM 2167 2223449 - 2223431 - R 91 -10.3 -4.05319 | opp_overlap 2223431, overlap 2223424 ATAAACAACATTAAA GAGTGGG GGATA CCCACTC TTTTGCTAATTTACT TERM 2168 2223431 - 2223449 + r 95 -10.3 -4.39989 | opp_overlap 2223424 2223431 ATAAACAACATTAAA GAGTGGG GGATA CCCACTC TTTTGCTAATTTACT Csac_2074 2224204 - 2223539 - | ribulose-phosphate 3-epimerase Csac_2075 2225123 - 2224251 - | ribosome small subunit-dependent GTPase A Csac_2076 2227011 - 2225128 - | protein kinase TERM 2169 2225775 - 2225800 + g 79 -7.1 -4.49088 | gap 1, opp_overlap 2225781, overlap 2225778 2225781 CCATCTCTGGCCCTT TACTAACTGTAA GTT TTACAGTT-GTA TCTTTTTTTACTTTA TERM 2170 2225778 - 2225798 + g 72 -7.7 -3.80651 | opp_overlap 2225781, overlap 2225775 2225781 TCTCTGGCCCTTTAC TAACTGTAA GTT TTACAGTTG TATCTTTTTTTACTT TERM 2171 2225781 - 2225795 + g 71 -7.2 -3.97983 | opp_overlap 2225781, overlap 2225778 2225775 CTGGCCCTTTACTAA CTGTAA GTT TTACAG TTGTATCTTTTTTTA Csac_2077 2227791 - 2227057 - | protein phosphatase 2C domain-containing protein Csac_2078 2228838 - 2227804 - | radical SAM protein Csac_2079 2230141 - 2228840 - | sun protein Csac_2080 2230833 - 2230138 - | peptidase, membrane zinc metallopeptidase, putative Csac_2081 2231788 - 2230853 - | methionyl-tRNA formyltransferase def 2232337 - 2231843 - | peptide deformylase Csac_2083 2234539 - 2232368 - | primosomal protein N' TERM 2172 2233039 - 2233053 + g 74 -2.8 -5.34309 | TACGTAGCACTCTTG CGTCTT TAA AATACG TTTTTATTTCATCCT TERM 2173 2234593 - 2234561 - R 76 -7.2 -4.2828 | gap 1, opp_overlap 2234564, overlap 2234562 2234564 CTCCACCCATTAAAA GTATTACCTCTGC TACCTTCT GCAGAGGTAAT-C TACTATGAAGTCAAA TERM 2174 2234564 - 2234591 + r 79 -10 -2.85999 | opp_overlap 2234561 2234562 2234564 CACCCATTAAAAGTA TTACCTCTGC TACCTTCT GCAGAGGTAA TCTACTATGAAGTCA TERM 2175 2234591 - 2234564 - R 81 -10 -3.14218 | opp_overlap 2234564, overlap 2234561 2234562 CACCCATTAAAAGTA TTACCTCTGC TACCTTCT GCAGAGGTAA TCTACTATGAAGTCA Csac_2084 2235775 - 2234573 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase Csac_2085 2235989 - 2235759 - | DNA-directed RNA polymerase, omega subunit Csac_2086 2236595 - 2235996 - | guanylate kinase Csac_2087 2236897 - 2236592 - | hypothetical protein Csac_2088 2237791 - 2236910 - | hypothetical protein TERM 2176 2238324 - 2238302 - g 70 -3.4 -5.06735 | opp_overlap 2238302, overlap 2238306 GAGAAAGTAGAAAAA GCAATTTTGA TCT TCAAAAAAGC TGATATTAACAACAT TERM 2177 2238614 - 2238590 - g 74 -4.3 -4.99035 | GTATTTATACAAAAA CCAGATGGA GGAATTG TCCATTTGG AAAATTTAAAGGAAT TERM 2178 2239391 - 2239410 + G 70 -2.8 -5.14563 | GTTAATATAGATTTT TCTCTTGC TCAA GCAAAGGA TTTTTTGATAAACAA Csac_2089 2237939 - 2239573 + | hydantoinase/oxoprolinase Csac_2090 2239589 - 2240911 + | histone deacetylase superfamily protein Csac_2091 2241804 - 2240926 - | hypothetical protein TERM 2179 2241961 - 2241945 - R 74 -9.5 -2.62983 | CTCAGTGGTAGAGCA GTCGATT CGT AATCGAC TGGTCGGGGGTTCGA TERM 2180 2242085 - 2242119 + r 82 -6.5 -5.02777 | overlap 2242086 AACTGTAAAATTTTA AGGTAACTACTCC ACTATCTTA GGAGTGGTTACCC TTTGTTTTTATATCT TERM 2181 2242086 - 2242118 + r 86 -10 -3.59226 | overlap 2242085 ACTGTAAAATTTTAA GGTAACTACTCC ACTATCTTA GGAGTGGTTACC CTTTGTTTTTATATC Csac_2094 2243883 - 2243302 - | hypothetical protein Csac_2095 2244073 - 2243864 - | hypothetical protein Csac_2096 2245080 - 2244133 - | transposase, IS4 family protein Csac_2097 2245836 - 2245201 - | XRE family transcriptional regulator TERM 2182 2246098 - 2246082 - H 71 -2.3 -5.41787 | GAAAAAATAGAAAAA TTGACAA TAT CTATCAA GGGAGCTGTCCAAAT Csac_2098 2246369 - 2246962 + | DnaB domain-containing protein TERM 2183 2247404 - 2247428 + G 78 -9.3 -3.54177 | overlap 2247399 ACCGATGGGGTCAAC TGCTTTTGCAG CAG CTGCAGATGCA TTAATTGGTTTTGGA Csac_2099 2246937 - 2247479 + | hypothetical protein TERM 2184 2247833 - 2247779 - g 75 -7.2 -4.31587 | overlap 2247781 2247782 2247807 CTCTAAAAATAATAA TACTGCAACAGTTGCAACATCTGCAA CAC CTGCAACACTTGCAACAGTTGCAACA GATGATAAATCGTTG TERM 2185 2247831 - 2247781 - g 72 -7.6 -3.74454 | overlap 2247779 2247782 2247807 CTAAAAATAATAATA CTGCAACAGTTGCAACATCTGCAA CAC CTGCAACACTTGCAACAGTTGCAA CAGATGATAAATCGT TERM 2186 2247929 - 2247918 - g 71 -4.4 -4.75472 | overlap 2247921 2247922 TTGAGAGTAATAAAA CAAC CATC GTTG CAAATGTTGCAAGCG Csac_2100 2247591 - 2247968 + | hypothetical protein Csac_2101 2248105 - 2248287 + | hypothetical protein Csac_2102 2248335 - 2248511 + | hypothetical protein Csac_2103 2248965 - 2248549 - | hypothetical protein TERM 2187 2248746 - 2248758 + g 76 -4.9 -4.93898 | opp_overlap 2248734 CTACAAAAGCACCTT TTGAA ACA TTCAA TTTTTCTGGTGGTGT Csac_2104 2249080 - 2248988 - | hypothetical protein TERM 2188 2249229 - 2249192 - R 72 -5.1 -4.85599 | gap 1, opp_overlap 2249193 2249197, overlap 2249193 TCCACCTCATAAAAA TTATT-TTAACACGTGTC AAT AACACGTGTCAATAATAT TTGCCATGAATAATC TERM 2189 2249228 - 2249193 - R 76 -8.6 -3.50877 | gap 1, opp_overlap 2249193 2249197, overlap 2249192 CCACCTCATAAAAAT TATT-TTAACACGTGTC AAT AACACGTGTCAATAATA TTTGCCATGAATAAT Csac_2105 2250516 - 2249725 - | IstB ATP binding domain-containing protein Csac_2106 2251991 - 2250513 - | integrase catalytic subunit TERM 2190 2252957 - 2252936 - g 74 -3 -5.28481 | CATCCAAGCAAAAAA GGTAAAGT TACAGT ACCTCACC TTAAGAAGAATTTGC Csac_2107 2252828 - 2253037 + | YcfA family protein Csac_2108 2253043 - 2253459 + | hypothetical protein TERM 2191 2253644 - 2253659 + T 73 -9 -2.88663 | GGGGGTTCGTATCCC CCATGG AGCT CCATGG TCTATCAAGATAAAT TERM 2192 2253678 - 2253713 + T 100 -9.2 -5.41746 | opp_overlap 2253681, overlap 2253681 ATCAAGATAAATAAA AAACTGTCAGGTTT AACCAGAA AAACCTGACAGTTA TTTTTTTAAGGAATT TERM 2193 2253681 - 2253710 + T 100 -10.9 -4.79949 | opp_overlap 2253681, overlap 2253678 AAGATAAATAAAAAA CTGTCAGGTTT AACCAGAA AAACCTGACAG TTATTTTTTTAAGGA TERM 2194 2253710 - 2253681 - T 100 -10.9 -5.7827 | opp_overlap 2253681 2253678 AAGATAAATAAAAAA CTGTCAGGTTT AACCAGAA AAACCTGACAG TTATTTTTTTAAGGA Csac_2109 2254106 - 2253711 - | CoA-binding domain-containing protein Csac_2110 2254762 - 2254118 - | hypothetical protein TERM 2195 2254515 - 2254499 - G 72 -3.7 -5.06505 | opp_overlap 2254499 2254501, overlap 2254493 2254501 AATCACAGAGAAAAA TCTATCC GAA GGATATA TTATCCGGGAAATAT Csac_2111 2255219 - 2254839 - | hypothetical protein Csac_2112 2255902 - 2255225 - | hypothetical protein TERM 2196 2255297 - 2255282 - G 78 -4 -5.35354 | gap 1, opp_overlap 2255282 2255292 GATACAAGCAAAAAA TACCTCC TCG GG-GGTA TTAATACCTCTTTTT TERM 2197 2255292 - 2255307 + g 88 -5.4 -5.55698 | opp_overlap 2255282, overlap 2255282 AAAAATACCTCCTCG GGGGTA TTAA TACCTC TTTTTTTAAGTTCTA TERM 2198 2255439 - 2255451 + g 76 -3.3 -5.33866 | opp_overlap 2255434 ATACCCAAATCTGCA GGCGT TAC AGGCC TTTTTTGTGACTTTG Csac_2113 2257491 - 2255968 - | hypothetical protein TERM 2199 2256045 - 2256059 + g 74 -2.9 -5.3658 | TACCTGTCGCCACCA TGTAT TTTTT ATACA TTTTCTTTTTGTACT TERM 2200 2256285 - 2256298 + g 72 -3.9 -4.90296 | opp_overlap 2256285 TATAAACAAACACCA TTCTT GTAA AAGAA TTTTTGTAACGTTTT TERM 2201 2256600 - 2256614 + g 75 -8.6 -3.6003 | opp_overlap 2256600, overlap 2256589 TTTGTTTTTTTAAAA GGGTTT CAA AAACCC TTTCCAAATGATTTA TERM 2202 2256614 - 2256600 - G 81 -8.6 -4.07568 | opp_overlap 2256589 2256600 TTTGTTTTTTTAAAA GGGTTT CAA AAACCC TTTCCAAATGATTTA TERM 2203 2257471 - 2257446 - G 86 -8.3 -4.51174 | opp_overlap 2257450, overlap 2257448 CTATTACAATTAAAA TAGAGGAAAGC ATTC GCCTTCCTCTT AAAAGCTTTGTCTTT TERM 2204 2257469 - 2257448 - G 89 -10.9 -3.85899 | opp_overlap 2257450, overlap 2257446 ATTACAATTAAAATA GAGGAAAGC ATTC GCCTTCCTC TTAAAAGCTTTGTCT Csac_2114 2258746 - 2257499 - | phenylacetate--CoA ligase TERM 2205 2258549 - 2258571 + g 74 -9.9 -2.6955 | opp_overlap 2258548, overlap 2258544 2258541 ATCAGTTGACGCAAG TCCGAGAGG ATAAG CTTCTCGGA GTTCCTCTTTGGTTG Csac_2115 2259350 - 2258790 - | pyruvate ferredoxin/flavodoxin oxidoreductase Csac_2116 2261139 - 2259343 - | thiamine pyrophosphate binding domain-containing protein TERM 2206 2259423 - 2259436 + g 81 -5.3 -5.1244 | opp_overlap 2259433, overlap 2259413 2259433 CATTGCAAAGAGTTT TGTCT ATGA AGACA TTTTTGTCTTCATCC TERM 2207 2260592 - 2260603 + g 74 -4.4 -4.90471 | overlap 2260581 CTTTTTTCAAAGCTT GAGA TCTT TCTC TTTTCTCTTTTGAAT Csac_2117 2261293 - 2261661 + | hypothetical protein Csac_2118 2261741 - 2262292 + | AbrB family transcriptional regulator TERM 2208 2262321 - 2262342 + F 100 -6.6 -5.86061 | ACTTTTGGGTTTTGA CTGTAGGT TTTAAT GCCTACAG TTTTTTTTAATGCAA TERM 2209 2262566 - 2262576 + G 70 -6.8 -4.08394 | overlap 2262574 GTTACAACAGGCTCA CCAG TTG CTGG TTTTGCCAAAGCTAT TERM 2210 2263095 - 2263084 - g 74 -4.4 -4.90266 | CCTACCAATGAAAAA TGAG GAAA CTCA ATTAGATTTGAAAAA Csac_2119 2262452 - 2263792 + | major facilitator transporter TERM 2211 2263835 - 2263806 - T 87 -7.9 -4.7908 | opp_overlap 2263802 2263808 2263820, overlap 2263796 2263808 AAAAACACAAATAAA GATGCCCAGTTTT TCCT AAGACTGGGCATT CTCGATTTTAGGTAA TERM 2212 2263808 - 2263833 + T 100 -12.7 -3.52515 | opp_overlap 2263806 2263796 2263808, overlap 2263802 2263820 AAACACAAATAAAGA TGCCCAGTTTT TCCT AAGACTGGGCA TTCTCGATTTTAGGT TERM 2213 2263833 - 2263808 - T 89 -10.5 -3.95749 | opp_overlap 2263808 2263802 2263820, overlap 2263806 2263796 AAACACAAATAAAGA TGCCCAGTTTT TCCT AAGACTGGGCA TTCTCGATTTTAGGT TERM 2214 2264033 - 2264051 + T 74 -7.4 -4.14392 | overlap 2264002 2264000 AGTCGCCTAACTGCT GGTGAGCT CTT ACCTCACC TTTTCACCCTTACCA TERM 2215 2264192 - 2264176 - T 78 -9.5 -3.29144 | GGACTTTCCTCACAA GGTGAAA AAC TTTCACC TTGCGCAGCCGTTCG Csac_2120 2265152 - 2264256 - | polyprenyl synthetase Csac_2121 2265412 - 2265149 - | exodeoxyribonuclease VII, small subunit Csac_2122 2266771 - 2265413 - | exodeoxyribonuclease VII, large subunit Csac_2123 2267203 - 2266775 - | NusB antitermination factor Csac_2124 2267437 - 2267228 - | hypothetical protein Csac_2125 2267987 - 2267448 - | hypothetical protein TERM 2216 2268049 - 2268012 - R 90 -9.3 -4.56597 | opp_overlap 2268015 2268022, overlap 2268013 2268015 TCCTCCTCGCAAAAA TGAGAGTAAATCTCTAG ATGA CCAGAGATTTACTCTTC TGATCCTTCTTTTTG TERM 2217 2268048 - 2268013 - R 100 -12.8 -3.33744 | opp_overlap 2268015 2268022, overlap 2268012 2268015 CCTCCTCGCAAAAAT GAGAGTAAATCTCTAG ATGA CCAGAGATTTACTCTT CTGATCCTTCTTTTT TERM 2218 2268046 - 2268015 - R 100 -15.4 -3.23708 | opp_overlap 2268015 2268022, overlap 2268013 2268012 TCCTCGCAAAAATGA GAGTAAATCTCTAG ATGA CCAGAGATTTACTC TTCTGATCCTTCTTT TERM 2219 2268015 - 2268046 + r 100 -13.2 -3.50358 | opp_overlap 2268015 2268013 2268012, overlap 2268022 TCCTCGCAAAAATGA GAGTAAATCTCTAG ATGA CCAGAGATTTACTC TTCTGATCCTTCTTT Csac_2126 2268427 - 2268041 - | hypothetical protein Csac_2127 2269034 - 2268519 - | hypothetical protein Csac_2128 2269579 - 2269031 - | hypothetical protein Csac_2129 2270078 - 2269560 - | hypothetical protein Csac_2130 2271192 - 2270083 - | hypothetical protein TERM 2220 2270323 - 2270335 + g 73 -2 -5.31275 | AGTAAGAAGCCCTAC TACA CTTAT TGTA TTTTTTATAATCCCA Csac_2131 2271599 - 2271213 - | hypothetical protein TERM 2221 2271559 - 2271545 - G 73 -7.2 -4.07885 | overlap 2271557 GAGTTTTTCTTAAAA TGCTTA CAA TAAGCA TAGAAACTATGCAAA TERM 2222 2271571 - 2271557 - G 78 -8.6 -3.81022 | overlap 2271545 AAATGCTTACAATAA GCATAG AAA CTATGC AAAGTATGACTATAT Csac_2132 2271814 - 2271614 - | stage III sporulation AC family protein Csac_2133 2272321 - 2271836 - | hypothetical protein Csac_2134 2273099 - 2272323 - | AAA ATPase TERM 2223 2272774 - 2272762 - G 72 -7.7 -3.64984 | opp_overlap 2272751 2272751 2272771, overlap 2272751 ATATCCCTCAAAAGA GTGGT TTT ACCAC AGCCAGGCGGTGATA Csac_2135 2274146 - 2273367 - | metallophosphoesterase TERM 2224 2273415 - 2273405 - G 73 -6.8 -4.1891 | opp_overlap 2273385 2273404 TTCTGTCAATAGAAA TGGC TTT GCCA GTTGAATCATCAATT TERM 2225 2274236 - 2274178 - R 77 -4.1 -5.37593 | gap 1, opp_overlap 2274186 2274191, overlap 2274191 CTTTAAACTAAAAAA GGATTTATAAAAAGCGTGTTCTGTTCAA AAGC TTGAACAAAACACGCTTTTCTTTC-TCA CTTTGCATATTCAAC TERM 2226 2274186 - 2274229 + r 100 -15.6 -4.02534 | opp_overlap 2274178 2274191, overlap 2274191 TAAAAAAGGATTTAT AAAAAGCGTGTTCTGTTCAA AAGC TTGAACAAAACACGCTTTTC TTTCTCACTTTGCAT TERM 2227 2274224 - 2274191 - R 100 -17.7 -4.89339 | opp_overlap 2274191 2274186, overlap 2274178 AAGGATTTATAAAAA GCGTGTTCTGTTCAA AAGC TTGAACAAAACACGC TTTTCTTTCTCACTT TERM 2228 2274191 - 2274224 + r 100 -15.5 -5.01553 | opp_overlap 2274178 2274191, overlap 2274186 AAGGATTTATAAAAA GCGTGTTCTGTTCAA AAGC TTGAACAAAACACGC TTTTCTTTCTCACTT Csac_2136 2275799 - 2274234 - | metal dependent phosphohydrolase TERM 2229 2274511 - 2274533 + g 75 -9.2 -3.17571 | CTTGCCCCTGGTCGT GCTGCTGA AACTGAA TCAGCAGC TTGAATTAACACATT Csac_2137 2276487 - 2275885 - | hypothetical protein TERM 2230 2276223 - 2276201 - G 82 -7.7 -4.43909 | overlap 2276198 ATCTTAACAAAATAA GCTACCGCC TCAGC AGCAGTAGC CGAATCATACCCTTT Csac_2138 2277541 - 2276471 - | recA protein Csac_2139 2278839 - 2277604 - | competence/damage-inducible protein CinA TERM 2231 2278316 - 2278329 + g 75 -5.3 -4.87665 | ACTCTTGAATATATC TTCTC TTTA GAGAA TTTTTCTAAATAAGG Csac_2140 2279402 - 2278854 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Csac_2141 2280724 - 2279402 - | MiaB-like tRNA modifying enzyme YliG Csac_2142 2281592 - 2280753 - | methylenetetrahydrofolate dehydrogenase (NADP(+)) TERM 2232 2281061 - 2281047 - GR 72 -8.6 -3.01791 | ATCCCTTGTGTAAGA GTGACA TAT TGTCAC AGTAGCATTTTCCCT TERM 2233 2281273 - 2281285 + gr 71 -4.9 -4.63932 | AAACCATCAACATCC TTTTG AGG CAAAA TTTTCTTACAAACTC Csac_2143 2283438 - 2281558 - | hypothetical protein TERM 2234 2281748 - 2281769 + gr 81 -3 -5.63517 | opp_overlap 2281748 TCAGGATTATTAAAA TGAAGCAA CGCCCT TTGCATCA TTTTTTCTTTCAAGG TERM 2235 2281986 - 2281999 + gr 73 -2.4 -5.28166 | AAGGAATTATAAACT GCTT CTTTCC AAGC TTTTTGTTAGTTTTA TERM 2236 2282412 - 2282422 + gr 76 -3.2 -5.39221 | CTTTAAAATCAGGAA GTTG AGT CAGC TTTTTTACTTCTTCT Csac_2144 2285623 - 2283446 - | cell divisionFtsK/SpoIIIE TERM 2237 2285719 - 2285700 - R 74 -2.1 -5.55855 | opp_overlap 2285700 TCCAAAAAAATAAAA CCCCT AAAATTGACA AGGGG TTCTTTACACCTTTT spoVFB 2286323 - 2285733 - | dipicolinate synthase subunit B Csac_2146 2287206 - 2286313 - | dipicolinate synthase subunit A TERM 2238 2287343 - 2287299 - R 100 -9.3 -5.67529 | AATTAAAAATAAAAA GCCCCCAGCATAACCACTTCC ATT GACAAAAGTTATACTGGAGGC ATTTAACACAACAAC TERM 2239 2287580 - 2287604 + r 71 -2.9 -5.15634 | opp_overlap 2287577, overlap 2287577 AACCCACAACACCAT CTATCTGATGT AAT GTATCATATAG TTTTTTCATACCATC Csac_2148 2288054 - 2287698 - | hypothetical protein Csac_2149 2288335 - 2288051 - | flagellar protein FhlB-like protein Csac_2150 2289767 - 2288340 - | hypothetical protein TERM 2240 2288668 - 2288658 - G 81 -4 -5.5112 | CCTATTAACAAAAAA TTGA AGT TCAA AAGGCTTTTCATTAA Csac_2151 2290391 - 2289774 - | ribonuclease H Csac_2152 2291220 - 2290372 - | GTP-binding protein, HSR1-related TERM 2241 2290991 - 2290961 - G 82 -10.7 -3.55444 | gap 1, opp_overlap 2290954 2290964, overlap 2290964 TTTGTACCTTTTAAA CAATCAACACAAAG TGCT CTTTG-GTTGATTG ATTCAAAATACTTCA TERM 2242 2291291 - 2291259 - R 100 -11.6 -5.72118 | gap 1, opp_overlap 2291259 AAAAAATATAAAAAA GAGACTAA-GCTTAA ACTT TTAAGCATTAGTCTC TTCTTGGATATTATC TERM 2243 2291259 - 2291291 + r 93 -11.6 -3.74542 | gap 1, opp_overlap 2291259 AAAAAATATAAAAAA GAGACTAA-GCTTAA ACTT TTAAGCATTAGTCTC TTCTTGGATATTATC Csac_2153 2291663 - 2291277 - | ribosomal protein L19 Csac_2154 2292508 - 2291771 - | tRNA (guanine-N1)-methyltransferase Csac_2155 2293020 - 2292511 - | 16S rRNA processing protein RimM TERM 2244 2292777 - 2292795 + g 76 -7.6 -4.15106 | TTTCTCTTTCTATCA CTAAAAAA CGA TTTTTTAG TTTTAGCGCTTCATC TERM 2245 2293038 - 2293073 + r 77 -9.2 -3.34962 | opp_overlap 2293043, overlap 2293043 TTTCTCACCTTTTTA AAAAAGAGTTAGGC AAAACTAC GCCTAACTCTTTTA TTGTAAAATCTCAAC TERM 2246 2293043 - 2293068 + r 93 -9.1 -4.78237 | opp_overlap 2293043, overlap 2293038 CACCTTTTTAAAAAA GAGTTAGGC AAAACTAC GCCTAACTC TTTTATTGTAAAATC TERM 2247 2293068 - 2293043 - R 100 -9.8 -5.0133 | opp_overlap 2293038 2293043 CACCTTTTTAAAAAA GAGTTAGGCA AAACTA CGCCTAACTC TTTTATTGTAAAATC Csac_2156 2293304 - 2293071 - | RNA-binding protein Csac_2157 2293578 - 2293333 - | ribosomal protein S16 Csac_2158 2294946 - 2293615 - | signal recognition particle protein Csac_2159 2295301 - 2294939 - | putative helix-turn-helix protein, YlxM/p13 family protein TERM 2248 2295518 - 2295553 + G 91 -5 -5.87996 | opp_overlap 2295524, overlap 2295524 AGAGGCAATAGTAGA TGAAAAGAATTAAAAT AAGC ATTTCAATTCTTTTTG TTTTTTTGTTAATTA TERM 2249 2295547 - 2295524 - g 73 -6.2 -4.38774 | opp_overlap 2295518 2295524 AATAGTAGATGAAAA GAATTAAAAT AAGC ATTTCAATTC TTTTTGTTTTTTTGT TERM 2250 2295524 - 2295547 + G 90 -4 -5.89659 | opp_overlap 2295524, overlap 2295518 AATAGTAGATGAAAA GAATTAAAAT AAGC ATTTCAATTC TTTTTGTTTTTTTGT Csac_2160 2295517 - 2295882 + | hypothetical protein Csac_2161 2295958 - 2296254 + | hypothetical protein TERM 2251 2296298 - 2296257 - T 100 -16.1 -5.35224 | opp_overlap 2296266, overlap 2296260 TTCAGAAAAATAAAA TATCTAAAAGGTGGGAAGT TAAA ACTTCCCACCTTTTTGTTA GCCTTAAAAACACAA TERM 2252 2296295 - 2296260 - T 100 -17.8 -3.1503 | opp_overlap 2296266, overlap 2296257 AGAAAAATAAAATAT CTAAAAGGTGGGAAGT TAAA ACTTCCCACCTTTTTG TTAGCCTTAAAAACA TERM 2253 2296266 - 2296289 + T 100 -15.4 -5.10208 | opp_overlap 2296260 2296257 ATAAAATATCTAAAA GGTGGGAAGT TAAA ACTTCCCACC TTTTTGTTAGCCTTA Csac_2162 2297306 - 2296452 - | ABC transporter related Csac_2163 2298438 - 2297344 - | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein Csac_2164 2299066 - 2298443 - | hypothetical protein Csac_2165 2299415 - 2299053 - | regulatory protein GntR, HTH Csac_2166 2300539 - 2299424 - | hypothetical protein TERM 2254 2300562 - 2300593 + H 85 -9 -4.04174 | CCTCCTGTTTGATTT TTATAGTGTTATAT AATT ATATAACACTAAAA TTTGATTCTGTCAAC Csac_2167 2301356 - 2301682 + | hypothetical protein Csac_2168 2302022 - 2301639 - | hypothetical protein Csac_2169 2303529 - 2302207 - | hypothetical protein TERM 2255 2302537 - 2302551 + g 75 -8.6 -3.51847 | AAATGCCTGTGCCAC GTTACC AAG GGTAAC TAATTTTTTATCTTT Csac_2170 2303954 - 2303550 - | hypothetical protein Csac_2171 2304628 - 2304011 - | hypothetical protein TERM 2256 2304692 - 2304678 - H 82 -10 -3.28924 | opp_overlap 2304678 TAGCCTTTTGCAGAA CGCTCA ATA TGAGCG TTATCAATCATTTAA TERM 2257 2304678 - 2304692 + H 84 -10 -3.41053 | opp_overlap 2304678 TAGCCTTTTGCAGAA CGCTCA ATA TGAGCG TTATCAATCATTTAA TERM 2258 2305346 - 2305383 + G 78 -3.6 -5.25893 | gap 2, opp_overlap 2305346 2305349, overlap 2305349 AGGAAATAGAAAAAG CAAGAGGGTTGGTTGGTA ACTT TACC--TCAACCCTCTTA TTTTTTACTGTATAT TERM 2259 2305349 - 2305380 + G 73 -5.3 -4.69962 | gap 2, opp_overlap 2305349 2305346, overlap 2305346 AAATAGAAAAAGCAA GAGGGTTGGTTGGTA ACTT TACC--TCAACCCTC TTATTTTTTACTGTA Csac_2172 2305093 - 2305401 + | glutamyl-tRNA synthetase, class Ic Csac_2173 2306403 - 2305456 - | hypothetical protein Csac_2174 2307271 - 2306423 - | hypothetical protein TERM 2260 2306551 - 2306539 - G 78 -7.7 -4.2928 | CATAAAAACTATAAA GCGAA TCA TTCGC TGCTAATTTATATCC TERM 2261 2307327 - 2307317 - H 74 -5.4 -4.8048 | opp_overlap 2307317 2307315 TTTTTACAGTAAAAA CTCA ATA TGAG TGTTATTATAAGAAC Csac_2175 2307853 - 2308305 + | glutamyl-tRNA synthetase, class Ic Csac_2176 2308501 - 2308343 - | hypothetical protein Csac_2177 2309384 - 2308563 - | hypothetical protein Csac_2178 2310334 - 2309384 - | ABC transporter related TERM 2262 2309521 - 2309533 + g 74 -2.7 -5.3658 | opp_overlap 2309512 TAAATATATCACATT GATAA TCC TTGTC TTTTGTTTTTATAAT TERM 2263 2309903 - 2309921 + g 86 -5.3 -5.33866 | overlap 2309904 AATTTCAACTCTTCT TCTTAGC CCACT GCTAAGG TTTTTTATCAATTTG TERM 2264 2310321 - 2310339 + g 70 -2.5 -5.22006 | ACTTCAATCATAAAT TTAGCAT TTATC ATGTTAA TTTTTCTTCTCCTCC Csac_2179 2310758 - 2310504 - | hypothetical protein TERM 2265 2311095 - 2311105 + r 74 -4 -5.14894 | AGATTATACTATTTA GAAA TTT TTTC TTTTTATCGTTTTTT Csac_2180 2311352 - 2311092 - | hypothetical protein Csac_2181 2311732 - 2312679 + | transposase, IS4 family protein Csac_2182 2313447 - 2312707 - | radical SAM domain-containing protein TERM 2266 2313194 - 2313209 + g 78 -7.6 -4.2828 | opp_overlap 2313193 CCGTTAGTAGTACAT GTGGTT TTAA AACCAC TTTTAGTCGCTAAAC TERM 2267 2314583 - 2314620 + G 78 -3.6 -5.25893 | gap 2, opp_overlap 2314583 2314586, overlap 2314586 AGGAAATAGAAAAAG CAAGAGGGTTGGTTGGTA ACTT TACC--TCAACCCTCTTA TTTTTTACTGTATAT TERM 2268 2314586 - 2314617 + G 73 -5.3 -4.69962 | gap 2, opp_overlap 2314586 2314583, overlap 2314583 AAATAGAAAAAGCAA GAGGGTTGGTTGGTA ACTT TACC--TCAACCCTC TTATTTTTTACTGTA Csac_2183 2314330 - 2314638 + | glutamyl-tRNA synthetase, class Ic Csac_2184 2315631 - 2314693 - | hypothetical protein TERM 2269 2315263 - 2315279 + g 75 -9.5 -3.25823 | ATAGATCCATCTACC CGTATCA ACT TGATACG TTAGTATACGAGAAG Csac_2185 2316508 - 2315660 - | hypothetical protein TERM 2270 2316564 - 2316554 - H 74 -5.4 -4.8048 | opp_overlap 2316554 2316552 TTTTTACAGTAAAAA CTCA ATA TGAG TGTTATTATAAGAAC TERM 2271 2317859 - 2317871 + G 70 -3.4 -5.03715 | ACGCCATGGTGCAAC CTCT GTGGA AGAG TTTTTTGAAAATGGT Csac_2186 2317089 - 2318537 + | glutamyl-tRNA synthetase TERM 2272 2318605 - 2318637 + TF 79 -3.4 -5.65678 | opp_overlap 2318608, overlap 2318606 2318608 TACTCCAAAAAATAA AAACCTCACCAG CTTTGTTCC CTGGTGAGGTCA TTTTTTATATTTTCT TERM 2273 2318608 - 2318634 + TF 80 -9.5 -3.51847 | opp_overlap 2318608, overlap 2318606 2318605 TCCAAAAAATAAAAA CCTCACCAG CTTTGTTCC CTGGTGAGG TCATTTTTTATATTT TERM 2274 2318634 - 2318608 - Tf 100 -9.5 -5.75538 | opp_overlap 2318608 2318606 2318605 TCCAAAAAATAAAAA CCTCACCAG CTTTGTTCC CTGGTGAGG TCATTTTTTATATTT TERM 2275 2318977 - 2318963 - Tf 77 -4.2 -5.38398 | AGAAAAATAGAAAAA CTACCA GGA TGGGAG GACAGCCTACTATGA Csac_2188 2321222 - 2320113 - | ABC-2 type transporter Csac_2187 2318989 - 2320254 + | hypothetical protein TERM 2276 2320934 - 2320906 - GT 71 -7.5 -3.47349 | opp_overlap 2320913, overlap 2320899 TTTGTAAAGTCAGAA GGGATAATCAAAG CTG CTTTGATTTTTCC ACTGTCAAGTCTACT TERM 2277 2320913 - 2320927 + gT 81 -7.2 -4.64766 | opp_overlap 2320906 2320899 AGTCAGAAGGGATAA TCAAAG CTG CTTTGA TTTTTCCACTGTCAA Csac_2189 2321978 - 2321256 - | ABC transporter related TERM 2278 2321377 - 2321365 - G 73 -5.5 -4.68724 | CCATTGAACATAAAA GCGAC ATA GTCAC ACCTCTCAGCCTCAT Csac_2190 2323114 - 2322005 - | secretion protein HlyD family protein Csac_2191 2323742 - 2323119 - | TetR family transcriptional regulator TERM 2279 2323763 - 2323778 + r 80 -6.2 -4.77165 | opp_overlap 2323770 CCCCTAAGTTTTTCA GTAAGT ACTT ACTTAC TTTTATTATAAAAAA TERM 2280 2323842 - 2323825 - R 100 -9.9 -5.85244 | opp_overlap 2323813 2323825 AACTAAAATAAAAAA GGGCTTT TAAC AAAGCCC TTTTTGCTCATATTT TERM 2281 2323825 - 2323842 + r 100 -9.9 -4.81734 | opp_overlap 2323825, overlap 2323813 AACTAAAATAAAAAA GGGCTTT TAAC AAAGCCC TTTTTGCTCATATTT Csac_2192 2324921 - 2324529 - | hypothetical protein TERM 2282 2324718 - 2324732 + g 74 -3.6 -5.22312 | ATTGTTTACGGGTAT CAATTT TTC AAGTTG TTTTTTGATATCAGT Csac_2193 2325457 - 2324960 - | nitroreductase TERM 2283 2327338 - 2327297 - H 78 -9.7 -3.35679 | opp_overlap 2327303 2327307, overlap 2327308 CTTTTCCATTCACAA TTGGGATAAAATATACACC GCTT GGTGTATACTTTATTTCAA AGCCATACCTTCTTG TERM 2284 2327303 - 2327332 + H 80 -9.5 -3.53811 | opp_overlap 2327297 2327308, overlap 2327307 CATTCACAATTGGGA TAAAATATACACC GCTT GGTGTATACTTTA TTTCAAAGCCATACC TERM 2285 2327307 - 2327328 + H 72 -5.9 -4.41348 | opp_overlap 2327297 2327308, overlap 2327303 CACAATTGGGATAAA ATATACACC GCTT GGTGTATAC TTTATTTCAAAGCCA TERM 2286 2327327 - 2327308 - H 91 -9.4 -4.40572 | opp_overlap 2327307 2327303, overlap 2327297 ACAATTGGGATAAAA TATACACC GCTT GGTGTATA CTTTATTTCAAAGCC TERM 2287 2328241 - 2328230 - g 77 -3 -5.52384 | opp_overlap 2328230 GCTTGAGCAAAAAAA TAAG CTTC CTTA TGGTCTTATGTTAGA Csac_2196 2328021 - 2328779 + | hypothetical protein Csac_2197 2329603 - 2328794 - | hypothetical protein TERM 2288 2329520 - 2329501 - G 76 -6.4 -4.4084 | opp_overlap 2329501 2329502, overlap 2329502 AATTATACACCAAAA TGCCATCA TCAA TGATGGCG TTTGCATCTATCATC TERM 2289 2329501 - 2329520 + g 78 -8.6 -3.74792 | opp_overlap 2329501 2329502, overlap 2329502 AATTATACACCAAAA TGCCATCA TCAA TGATGGCG TTTGCATCTATCATC TERM 2290 2329519 - 2329502 - G 77 -9.9 -3.23419 | opp_overlap 2329501 2329502, overlap 2329501 ATTATACACCAAAAT GCCATCA TCAA TGATGGC GTTTGCATCTATCAT TERM 2291 2329502 - 2329519 + g 75 -9.9 -2.84393 | opp_overlap 2329502 2329501, overlap 2329501 ATTATACACCAAAAT GCCATCA TCAA TGATGGC GTTTGCATCTATCAT Csac_2198 2330322 - 2329648 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 2292 2330280 - 2330254 - G 100 -9.4 -5.61881 | opp_overlap 2330255 2330256, overlap 2330255 2330256 TTCTAAAAACAAAAA TTGTTTGGGGGT GCT ACCCCCAAACCT TTTGCCGCTACCTGC TERM 2293 2330255 - 2330279 + g 95 -12.9 -4.11692 | opp_overlap 2330254 2330255 2330256, overlap 2330256 TCTAAAAACAAAAAT TGTTTGGGGGT GCT ACCCCCAAACC TTTTGCCGCTACCTG TERM 2294 2330279 - 2330255 - G 95 -12.9 -3.95502 | opp_overlap 2330255 2330256, overlap 2330254 2330256 TCTAAAAACAAAAAT TGTTTGGGGGT GCT ACCCCCAAACC TTTTGCCGCTACCTG TERM 2295 2330278 - 2330256 - G 100 -16.4 -2.95674 | opp_overlap 2330256 2330255, overlap 2330255 2330254 CTAAAAACAAAAATT GTTTGGGGGT GCT ACCCCCAAAC CTTTTGCCGCTACCT TERM 2296 2330256 - 2330278 + g 100 -16.4 -3.06694 | opp_overlap 2330255 2330254 2330256, overlap 2330255 CTAAAAACAAAAATT GTTTGGGGGT GCT ACCCCCAAAC CTTTTGCCGCTACCT Csac_2199 2331990 - 2330338 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2297 2331893 - 2331916 + g 70 -5.4 -4.51197 | opp_overlap 2331884 GATACATATTCACCT TGCTCAAA GAGAATAA TTTGAGCA TTTTCATTAGTTCTG Csac_2200 2334635 - 2332080 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 2298 2333578 - 2333589 + g 74 -3 -5.4111 | CACAGCATTATGTAG TCAA GTAA TTGA TTTTTTATAATTCTT TERM 2299 2333994 - 2334004 + g 78 -6.8 -4.62054 | overlap 2333990 TTGATTCAGCCTCAG CTCC AGC GGAG TTTTAGTTTCCTTAA TERM 2300 2334986 - 2334963 - g 70 -6.8 -4.13014 | CTTATATCTCGAAAA TGGTGATTGA CGAA TCAATCACTA AAAGAAAATATAATT Csac_2201 2334842 - 2336581 + | ABC transporter related TERM 2301 2337659 - 2337669 + G 75 -5.4 -4.8048 | GGCGAAATTAGGTTT GAGA ATG TCTC TTTTTCGTATGAAGA Csac_2202 2336585 - 2338378 + | ABC transporter related Csac_2203 2338859 - 2338488 - | hypothetical protein TERM 2302 2338996 - 2338971 - R 75 -2.6 -5.54079 | gap 2 CCAAAAATTAAAAAA GGGCAGGAGGAA AAAA TTCC-CC-ACCC TTTTTCAAAAAGCTA Csac_2204 2339430 - 2339041 - | ribosomal protein L7/L12 Csac_2205 2340003 - 2339470 - | ribosomal protein L10 TERM 2303 2340062 - 2340020 - R 100 -12.3 -4.87665 | opp_overlap 2340022 2340023 2340028, overlap 2340023 2340028 TCCTACCCATAAAAA TTATTAAAGCCTCTTTAAG TTTAC CTTAAAGAGGCTGTAATTA CCCTTCCCCTCGGCT TERM 2304 2340059 - 2340023 - R 100 -14 -3.32986 | opp_overlap 2340023 2340022 2340028, overlap 2340020 2340028 TACCCATAAAAATTA TTAAAGCCTCTTTAAG TTTAC CTTAAAGAGGCTGTAA TTACCCTTCCCCTCG TERM 2305 2340054 - 2340028 - R 100 -13.9 -3.97241 | opp_overlap 2340023 2340022 2340028, overlap 2340023 2340020 ATAAAAATTATTAAA GCCTCTTTAAG TTTAC CTTAAAGAGGC TGTAATTACCCTTCC TERM 2306 2340028 - 2340054 + r 100 -13.9 -2.92246 | opp_overlap 2340028 2340023 2340020, overlap 2340023 2340022 ATAAAAATTATTAAA GCCTCTTTAAG TTTAC CTTAAAGAGGC TGTAATTACCCTTCC TERM 2307 2340156 - 2340173 + r 77 -8.5 -3.5882 | opp_overlap 2340156 2340170 CAAACTTTAAGCAAA GCACTTT TTCA AAAGTGC TTTGCACCTACTGTC TERM 2308 2340173 - 2340156 - R 79 -8.5 -3.9444 | opp_overlap 2340156, overlap 2340170 CAAACTTTAAGCAAA GCACTTT TTCA AAAGTGC TTTGCACCTACTGTC TERM 2309 2340180 - 2340170 - R 71 -6.8 -4.08945 | opp_overlap 2340156, overlap 2340156 AGCACTTTTTCAAAA GTGC TTT GCAC CTACTGTCTTCGGTT Csac_2206 2340918 - 2340229 - | ribosomal protein L1 Csac_2207 2341425 - 2341000 - | ribosomal protein L11 Csac_2208 2341990 - 2341463 - | NusG antitermination factor TERM 2310 2341794 - 2341805 + g 86 -4.4 -5.72207 | TTTATTAGCACATAT GAAG GAAA CTTC TTTTTTTCCTTTACA Csac_2209 2342318 - 2342049 - | preprotein translocase, SecE subunit Csac_2210 2342504 - 2342340 - | ribosomal protein L33 Csac_2211 2342939 - 2343316 + | hypothetical protein Csac_2213 2344327 - 2344806 + | hypothetical protein TERM 2311 2344798 - 2344820 + F 72 -5 -4.88222 | overlap 2344802 ATGAATCTAACTTTT TTCTTTTAAA TGT TCTAAAAGAA TTTTTAAATTTTAGT Csac_2214 2345819 - 2346256 + | XRE family transcriptional regulator Csac_2216 2347298 - 2346978 - | hypothetical protein TERM 2312 2348026 - 2348012 - g 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 2313 2348563 - 2348548 - g 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_2217 2347427 - 2348656 + | transposase, mutator type Csac_2218 2348880 - 2348629 - | hypothetical protein Csac_2219 2348900 - 2349166 + | hypothetical protein Csac_2220 2349163 - 2349552 + | hypothetical protein Csac_2221 2349515 - 2350597 + | phage integrase family protein TERM 2314 2350827 - 2350809 - T 74 -8.8 -3.18274 | opp_overlap 2350816 2350818 GTGATGGGAATCGAA CCCACGCT ACC AGCTTGGG AAGCTGGTGTTCTAC TERM 2315 2350816 - 2350836 + T 83 -10.5 -3.36671 | opp_overlap 2350809, overlap 2350818 GAATCGAACCCACGC TACCAGCTT GGG AAGCTGGTG TTCTACCATTGAACT TERM 2316 2350818 - 2350834 + T 85 -10.9 -3.25192 | opp_overlap 2350809, overlap 2350816 ATCGAACCCACGCTA CCAGCTT GGG AAGCTGG TGTTCTACCATTGAA Csac_2222 2351122 - 2350907 - | hypothetical protein Csac_2223 2351939 - 2351190 - | hypothetical protein TERM 2317 2351309 - 2351336 + g 80 -2 -5.60993 | TAAAAACCTTTGAAA CTCTCTTTTCAA CCTT TTGAATGGAAAG TTTTTTTGTCAAAAA Csac_2224 2352637 - 2351957 - | GntR family transcriptional regulator Csac_2225 2353524 - 2352652 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 2318 2353132 - 2353117 - G 78 -5.4 -5.00851 | opp_overlap 2353117 ACCAACTAAACAAAA TGGAAC ATCA GCTCCA ATTTCTCTTCCCAAT TERM 2319 2353706 - 2353687 - H 87 -4.3 -5.83226 | opp_overlap 2353687 AATGTAATAAAAAAA GACCACT CTACTT AATGGTC TTAATACATAATGCT TERM 2320 2354362 - 2354350 - g 70 -2.7 -5.07567 | CCAGAGCTTAAAAAA GAATT ACA AACTC AAGGTTATACATTCT TERM 2321 2355754 - 2355727 - g 74 -5 -4.75776 | opp_overlap 2355735, overlap 2355735 AATGTAAGTGAAAAA GTCAAAAAGATT ATAG AATCTCTTTCAC CAATTTTTGAAATTA Csac_2226 2354086 - 2355921 + | asparagine synthase (glutamine-hydrolyzing) Csac_2227 2356047 - 2357117 + | carbamoyl-phosphate synthase, small subunit TERM 2322 2357857 - 2357875 + GF 82 -11 -2.71483 | opp_overlap 2357856 TTGGAATTCACACAG GCGACAGC ATT GTTGTCGC TCCTTCGCAGACTCT TERM 2323 2358079 - 2358060 - gf 87 -8.6 -4.30576 | GCCTTAGCATCAAAA GCAACAGG TTAT CCTATTGC TCGAATTGCAGCAAA Csac_2228 2357124 - 2360357 + | carbamoyl-phosphate synthase, large subunit Csac_2229 2360332 - 2361258 + | ornithine carbamoyltransferase TERM 2324 2361270 - 2361319 + T 100 -8.1 -5.58522 | opp_overlap 2361275, overlap 2361273 2361275 ATGAAATGATTTAAA AAAAAGGGCTCCATATCAA CAGCCAAAAAAA TTGATATGGAGCCCTATTG TTTTTGTTTTCTATA TERM 2325 2361273 - 2361316 + T 100 -9.8 -4.82111 | opp_overlap 2361275, overlap 2361270 2361275 AAATGATTTAAAAAA AAGGGCTCCATATCAA CAGCCAAAAAAA TTGATATGGAGCCCTA TTGTTTTTGTTTTCT TERM 2326 2361275 - 2361314 + T 100 -12.4 -3.97385 | opp_overlap 2361275, overlap 2361273 2361270 ATGATTTAAAAAAAA GGGCTCCATATCAA CAGCCAAAAAAA TTGATATGGAGCCC TATTGTTTTTGTTTT TERM 2327 2361314 - 2361275 - T 100 -13.1 -5.82316 | opp_overlap 2361275 2361273 2361270 ATGATTTAAAAAAAA GGGCTCCATATCAAC AGCCAAAAAA ATTGATATGGAGCCC TATTGTTTTTGTTTT Csac_2230 2362091 - 2361330 - | tryptophan synthase, alpha subunit Csac_2231 2363269 - 2362094 - | tryptophan synthase subunit beta TERM 2328 2362935 - 2362909 - G 95 -11.6 -4.62336 | opp_overlap 2362907 2362911 ATTCCATGCCAAAAA GTGCTGCAACTG TAG CTGTTGCAACAC CGTGTTGACCTGCAC Csac_2232 2363876 - 2363262 - | phosphoribosylanthranilate isomerase Csac_2233 2364655 - 2363873 - | indole-3-glycerol-phosphate synthase Csac_2234 2365670 - 2364660 - | anthranilate phosphoribosyltransferase Csac_2235 2366262 - 2365651 - | glutamine amidotransferase of anthranilate synthase Csac_2236 2367610 - 2366243 - | anthranilate synthase TERM 2329 2367588 - 2367568 - G 100 -12.6 -5.21709 | opp_overlap 2367566 2367565 CTTGATAGCAAAAAA GCCCCGAT GAGCT ATCGGGGC GCATATTTGCCACCT Csac_2237 2368906 - 2367842 - | peptidase M24 Csac_2238 2369378 - 2368941 - | 3-dehydroquinate dehydratase, type II Csac_2239 2370247 - 2369387 - | xylose isomerase domain-containing protein Csac_2240 2370762 - 2370244 - | shikimate kinase TERM 2330 2370876 - 2370841 - R 80 -5.6 -5.1287 | opp_overlap 2370847 2370874, overlap 2370847 TTTACATTGAAAAAA TAAAAAGACCATTC TTACAATC GAATGGCCTTTTAA AAATATTTTACTTTT TERM 2331 2370870 - 2370847 - R 87 -4.6 -5.75538 | opp_overlap 2370847, overlap 2370841 TTGAAAAAATAAAAA GACCATTC TTACAATC GAATGGCC TTTTAAAAATATTTT Csac_2241 2371741 - 2370899 - | hypothetical protein TERM 2332 2371415 - 2371445 + g 73 -3.5 -5.18643 | gap 1, overlap 2371420 ACTGCTATCTATGTC TATTATTTCAGGTA CAAA TACCTGTAA-AATA TTTTCTTTTGGTTGA Csac_2242 2371917 - 2372468 + | RNA polymerase sigma factor SigY Csac_2243 2372449 - 2372850 + | hypothetical protein Csac_2244 2372855 - 2373148 + | hypothetical protein Csac_2245 2373165 - 2373371 + | hypothetical protein Csac_2246 2373373 - 2374302 + | ABC transporter related TERM 2333 2374619 - 2374662 + G 73 -5.5 -4.64159 | overlap 2374626 2374647 GGTGCAAATAAATCC CAAATTGTACTGGCAAAGT ATTTTC ATTTTGCAATTGCAATTTG TTTGTTCTTATTTGT TERM 2334 2374647 - 2374658 + G 71 -4.4 -4.79953 | overlap 2374619 CAAAGTATTTTCATT TTGC AATT GCAA TTTGTTTGTTCTTAT Csac_2247 2374289 - 2375047 + | hypothetical protein TERM 2335 2375786 - 2375802 + T 79 -7.3 -4.4715 | overlap 2375768 GGGGGAGATCAGCCT GTTATCC CCG GGGTAAC TTTTATCCGTTGAGC TERM 2336 2376013 - 2375999 - T 70 -7.1 -3.64822 | ACCGCCCCAGTCAAA CTGCC CACCT GGCAG TGTCCCATCACTCGG TERM 2337 2376350 - 2376364 + T 77 -7.8 -4.09685 | overlap 2376334 CCGCCGTTCACTGGG GCTTCG GTT CGGAGC TTTTCACCCCTCCCC TERM 2338 2376755 - 2376776 + T 72 -8.7 -3.10894 | opp_overlap 2376737 CCGCTCGCCGCTTGG CCGGGGT CAACCAAC ACCCCGG TTGCCTGCTCCTCCT TERM 2339 2377749 - 2377760 + T 76 -7.2 -4.2354 | AGGCTCTATTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TERM 2340 2377794 - 2377810 + T 76 -8.7 -3.41222 | opp_overlap 2377797, overlap 2377792 CACGGTACTCGTACA CTATCGG TCA CCGGTAG TATTTAGCCTTGGAG TERM 2341 2378617 - 2378636 + T 72 -9.2 -2.65808 | overlap 2378614 AAAGGAGGTGATCCA GCCGCACG TTCC CGTACGGC TACCTTGTTACGACT TERM 2342 2379515 - 2379533 + T 74 -9.6 -2.7644 | opp_overlap 2379508, overlap 2379514 AGTATTAAGCGCAAT CCTTAGGT TGA GCCTAAGG CTTTCACGCTTAACT Csac_2248 2382620 - 2380413 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Csac_2249 2383636 - 2382617 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Csac_2250 2384851 - 2383667 - | tRNA adenylyltransferase Csac_2251 2384982 - 2385782 + | HisJ family histidinol phosphate phosphatase TERM 2343 2385803 - 2385778 - T 87 -7.5 -4.88736 | opp_overlap 2385782, overlap 2385780 2385782 CAGTATTTACAAAAA TATAGGCCCTC ACAC GAGGGCCTTTT CTATTATACCACCAC TERM 2344 2385801 - 2385780 - T 90 -10.1 -4.06182 | opp_overlap 2385782, overlap 2385778 2385782 GTATTTACAAAAATA TAGGCCCTC ACAC GAGGGCCTT TTCTATTATACCACC TERM 2345 2385799 - 2385782 - T 100 -12.7 -3.61603 | opp_overlap 2385782, overlap 2385780 2385778 ATTTACAAAAATATA GGCCCTC ACAC GAGGGCC TTTTCTATTATACCA TERM 2346 2385782 - 2385799 + T 100 -12.7 -4.73682 | opp_overlap 2385780 2385778 2385782 ATTTACAAAAATATA GGCCCTC ACAC GAGGGCC TTTTCTATTATACCA Csac_2252 2386872 - 2385787 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Csac_2253 2387280 - 2386897 - | NifU domain-containing protein Csac_2254 2388467 - 2387283 - | aminotransferase, class V Csac_2255 2388984 - 2388532 - | BadM/Rrf2 family transcriptional regulator TERM 2347 2389077 - 2389097 + r 74 -4 -5.30575 | opp_overlap 2389078, overlap 2389078 TTGCTAAATAAAAAA ATCCATCT TTTTT AGATGGAC TTTTTTAAGTTTTTG TERM 2348 2389096 - 2389078 - R 100 -7.5 -5.95539 | opp_overlap 2389077 2389078 TGCTAAATAAAAAAA TCCATCT TTTTT AGATGGA CTTTTTTAAGTTTTT TERM 2349 2389078 - 2389096 + r 73 -7.5 -3.75905 | opp_overlap 2389078, overlap 2389077 TGCTAAATAAAAAAA TCCATCT TTTTT AGATGGA CTTTTTTAAGTTTTT Csac_2256 2389612 - 2389235 - | PilT domain-containing protein Csac_2257 2389832 - 2389596 - | prevent-host-death family protein TERM 2350 2389984 - 2389963 - R 95 -8.7 -5.0925 | TGCCAAAACTAAAAA GGCGGGCAT TAAA ATACCCACC CCATTTCTTGACAAA TERM 2351 2390396 - 2390369 - R 100 -14.3 -4.59376 | opp_overlap 2390370 2390376 ACTATTAAATGAAAA GGTCAAAGAGG ACTTTG CCTCTTTGACC TTACACCAGCTCTAT Csac_2258 2390738 - 2390397 - | ribosomal protein L17 TERM 2352 2390716 - 2390729 + g 70 -5.3 -4.4388 | TGGTCTGTATCGCGT TTGAG TTTT CTCAA TTTGTTCATTTCTCT Csac_2259 2391709 - 2390735 - | DNA-directed RNA polymerase, alpha subunit Csac_2260 2392393 - 2391767 - | ribosomal protein S4 Csac_2261 2392809 - 2392417 - | 30S ribosomal protein S11 rpsM 2393203 - 2392829 - | 30S ribosomal protein S13 Csac_2263 2393397 - 2393227 - | ribosomal protein L36 Csac_2264 2393587 - 2393369 - | translation initiation factor IF-1 Csac_2265 2393871 - 2393602 - | hypothetical protein Csac_2266 2394627 - 2393884 - | methionine aminopeptidase, type I Csac_2267 2395292 - 2394645 - | nucleoside-triphosphate--adenylate kinase Csac_2268 2396638 - 2395331 - | preprotein translocase, SecY subunit TERM 2353 2395740 - 2395719 - G 76 -10.3 -2.74122 | overlap 2395718 2395716 CCCGATGAGAAATAC GCTTTTACA AATT TGTAAAAGC CAGAATTTGGGAAAA Csac_2269 2397083 - 2396640 - | ribosomal protein L15 Csac_2270 2397607 - 2397101 - | ribosomal protein S5 TERM 2354 2397406 - 2397391 - G 72 -7.6 -3.65046 | opp_overlap 2397391 2397393 TTGGTACTTCAATAA GATGCT TCTT AGCATC TTCAATAGCCTTTCT Csac_2271 2397996 - 2397628 - | ribosomal protein L18 Csac_2272 2398561 - 2398013 - | ribosomal protein L6 Csac_2273 2398993 - 2398595 - | ribosomal protein S8 rpsN 2399205 - 2399020 - | 30S ribosomal protein S14 Csac_2275 2399774 - 2399232 - | ribosomal protein L5 Csac_2276 2400134 - 2399802 - | ribosomal protein L24 Csac_2277 2400523 - 2400155 - | ribosomal protein L14 rpsQ 2400826 - 2400566 - | 30S ribosomal protein S17 Csac_2279 2401070 - 2400852 - | ribosomal protein L29 rplP 2401500 - 2401057 - | 50S ribosomal protein L16 TERM 2355 2401418 - 2401440 + g 73 -5.7 -4.62957 | gap 1, opp_overlap 2401417, overlap 2401417 2401418 CCAAAATCACCATAT GCAACAA-AG TTGC CTCTTGTTGC TTTTCCTTTCATTCT Csac_2281 2402168 - 2401500 - | ribosomal protein S3 Csac_2282 2402559 - 2402191 - | ribosomal protein L22 rpsS 2402899 - 2402615 - | 30S ribosomal protein S19 rplB 2403765 - 2402935 - | 50S ribosomal protein L2 Csac_2285 2404090 - 2403800 - | ribosomal protein L25/L23 TERM 2356 2403958 - 2403970 + g 71 -4.8 -4.63044 | opp_overlap 2403958 2403956 CCTCAACGCCAAACA GCTG CTCAA CAGC TTTCTTTATCTCAAT Csac_2286 2404718 - 2404092 - | ribosomal protein L4/L1e rplC 2405380 - 2404748 - | 50S ribosomal protein L3 Csac_2288 2405707 - 2405387 - | ribosomal protein S10 TERM 2357 2405827 - 2405802 - H 70 -3.9 -4.96848 | overlap 2405804 CTTTTTATATAAAAA TACCCGGAGTT TTCC ATCTTCGGGCA TAAAAACACCGGGCA TERM 2358 2406202 - 2406188 - H 77 -4.2 -5.38398 | AGAAAAATAGAAAAA CTACCA GGA TGGGAG GACAGCCTACTATGA Csac_2289 2406214 - 2407314 + | hypothetical protein Csac_2290 2407472 - 2407311 - | hypothetical protein Csac_2291 2408038 - 2407532 - | rubrerythrin Csac_2292 2408254 - 2409432 + | metal dependent phosphohydrolase TERM 2359 2409419 - 2409453 + T 77 -8 -3.93695 | opp_overlap 2409419, overlap 2409409 TTGAACTTCTCAGAA GAGCAGTAGTATGA AAGAAGA TTTTACTACTGCTC TTTGTAGCTACTGCC Csac_2293 2410812 - 2409445 - | integral membrane sensor signal transduction histidine kinase Csac_2294 2411500 - 2410796 - | two component transcriptional regulator Csac_2295 2411662 - 2413053 + | phosphoglucomutase TERM 2360 2413315 - 2413341 + F 82 -9.5 -3.61517 | TGTATATTCTTCTCA GGAGGTTCG CACCTTTAA CGAACCTCC TTCTTCACAAAAAAT Csac_2296 2413392 - 2414435 + | radical SAM domain-containing protein TERM 2361 2414554 - 2414570 + G 80 -6.7 -4.7173 | opp_overlap 2414554 AACTTTCTTACTAAA TGATATA GGG TATATCA TTTTTGAGTGTGCTC Csac_2297 2414459 - 2414731 + | hypothetical protein Csac_2298 2414728 - 2415885 + | major facilitator transporter TERM 2362 2415966 - 2415932 - T 73 -7.9 -3.57309 | opp_overlap 2415945, overlap 2415934 CAAAATCTTTTTAAA CAGCGAGACTACACA AATAA TTTGTAGTCTCGCAA AACTTTCATTCAAAC TERM 2363 2415964 - 2415934 - T 100 -12.7 -3.3579 | opp_overlap 2415945, overlap 2415932 AAATCTTTTTAAACA GCGAGACTACACA AATAA TTTGTAGTCTCGC AAAACTTTCATTCAA Csac_2299 2417399 - 2415972 - | putative aminopeptidase 1 Csac_2300 2417615 - 2418829 + | natural resistance-associated macrophage protein TERM 2364 2418874 - 2418838 - T 76 -3.6 -5.35224 | opp_overlap 2418838 TTTATAAAAATAAAA GTGGGCAGATGAAAAG AAAAA CACTTTGCCTGCCCAC TTCTTTATTTTTTTA Csac_2301 2419087 - 2418887 - | hypothetical protein Csac_2302 2420718 - 2419108 - | radical SAM domain-containing protein TERM 2365 2420227 - 2420240 + g 74 -8.1 -3.80573 | opp_overlap 2420226 CGTACATCTAAAAGG GCAGC CTCT GCTGC TTTCATAATAATAGA TERM 2366 2420821 - 2420804 - R 100 -8.4 -5.75538 | opp_overlap 2420802 2420800 2420804 GCTAAAAAACAAAAA GGCAGG GTTTTT CCTGCC TCTATTAGTTAAGAT TERM 2367 2420804 - 2420821 + r 77 -9.1 -3.18634 | opp_overlap 2420804, overlap 2420802 2420800 GCTAAAAAACAAAAA GGCAGGG TTTT TCCTGCC TCTATTAGTTAAGAT Csac_2303 2421322 - 2420846 - | hypothetical protein Csac_2304 2421559 - 2421335 - | SirA family protein TERM 2368 2421384 - 2421404 + g 71 -4.8 -4.57073 | opp_overlap 2421384 TTTACTTCTTCTAAA GACAAAAG TTCAT TTTTTGTC TTTTTACACCAGCTC TERM 2369 2421731 - 2421748 + r 72 -2.7 -5.40072 | AAAAAAAGAAAGACA CTCTTGA CTTT TTAGGAG TTTTTTTACCCCAAA Csac_2305 2422011 - 2421754 - | hypothetical protein Csac_2306 2422224 - 2422021 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2370 2422272 - 2422295 + H 74 -5.4 -4.78661 | gap 1, overlap 2422273 2422275 TGCAACCTCTTTTTG TA-ACCCCTAT ACC ATGGGGGTGTA TTTTAATTTTTAAGT TERM 2371 2422275 - 2422291 + H 76 -8.7 -3.55764 | overlap 2422273 2422272 AACCTCTTTTTGTAA CCCCTAT ACC ATGGGGG TGTATTTTAATTTTT TERM 2372 2422575 - 2422585 + G 78 -4 -5.2696 | overlap 2422580 TATGTGGATTTGGAT TCTT TGA AAGA TTTTTTCGGTTTTGA Csac_2307 2422446 - 2423558 + | 2-alkenal reductase Csac_2308 2423582 - 2425456 + | hypothetical protein TERM 2373 2425505 - 2425460 - T 74 -4.2 -5.23396 | gap 2, opp_overlap 2425461, overlap 2425461 AACAATGAATAAAAA TTTAAAAGGGCTGCACGGCATT TAAA AAAGC-A-GCAGCCCTTTTAAC TTTCTTATCTCACTA TERM 2374 2425504 - 2425461 - T 73 -7.7 -3.71597 | gap 2, opp_overlap 2425461, overlap 2425460 ACAATGAATAAAAAT TTAAAAGGGCTGCACGGCATT TAAA AAAGC-A-GCAGCCCTTTTAA CTTTCTTATCTCACT Csac_2309 2426132 - 2425536 - | hypothetical protein Csac_2310 2427293 - 2426181 - | putative RNA methylase Csac_2311 2427604 - 2427293 - | TrpR like protein, YerC/YecD TERM 2375 2427397 - 2427411 + g 81 -5.6 -5.20154 | CTCTGCTTATTGTAG CAGGAG AAG CCCCTG TTTTTTGGGTTATCT TERM 2376 2427616 - 2427626 + r 71 -6.8 -4.03586 | overlap 2427623 TCATACCCTTTTGCA CCTC TTC GAGG TTATTCTCTTTAAAA TERM 2377 2427714 - 2427696 - R 100 -8.9 -5.67967 | opp_overlap 2427696 ACCAGCATAAAAAAA GTGAGGA TTTAT TCCTCAC TTTTGGTAATAGTCT TERM 2378 2427696 - 2427714 + r 88 -8.9 -4.32436 | opp_overlap 2427696 ACCAGCATAAAAAAA GTGAGGA TTTAT TCCTCAC TTTTGGTAATAGTCT Csac_2312 2428597 - 2427704 - | hypothetical protein Csac_2313 2429438 - 2428686 - | hypothetical protein Csac_2314 2429989 - 2429435 - | hypothetical protein TERM 2379 2429679 - 2429689 + g 86 -5.4 -5.30575 | opp_overlap 2429674 2429679 GTTGCTACAATAAAA CCAA GAT TTGG TTTTTTACCTTTTTC TERM 2380 2429689 - 2429679 - G 75 -5.4 -4.77165 | opp_overlap 2429679, overlap 2429674 GTTGCTACAATAAAA CCAA GAT TTGG TTTTTTACCTTTTTC TERM 2381 2430128 - 2430096 - R 87 -5.6 -5.58522 | opp_overlap 2430096 2430096, overlap 2430097 TATACAAAACAAAAA GTCCTACACCGC TTTTAGTTT GCGATGTAGGAG CTATCTCTTTTACAT TERM 2382 2430127 - 2430097 - R 81 -9.1 -3.92673 | opp_overlap 2430096 2430096, overlap 2430096 ATACAAAACAAAAAG TCCTACACCGC TTTTAGTTT GCGATGTAGGA GCTATCTCTTTTACA Csac_2315 2430953 - 2430138 - | inosine guanosine and xanthosine phosphorylase family protein Csac_2316 2432160 - 2430991 - | phosphopentomutase TERM 2383 2431686 - 2431656 - G 71 -6.9 -3.91144 | CGCATATTCTATAAA GCTCATCAAGAGG AATGA CATCTTCATGAGC AGCAATCTGAAATAC Csac_2317 2432857 - 2432195 - | deoxyribose-phosphate aldolase Csac_2318 2434206 - 2432881 - | pyrimidine-nucleoside phosphorylase Csac_2319 2434857 - 2434450 - | cytidine deaminase Csac_2320 2435593 - 2434862 - | GntR family transcriptional regulator Csac_2321 2436543 - 2435614 - | inner-membrane translocator Csac_2322 2437561 - 2436545 - | inner-membrane translocator Csac_2323 2438570 - 2437623 - | transposase, IS4 family protein Csac_2324 2440265 - 2438754 - | ABC transporter related Csac_2325 2441019 - 2440285 - | methylthioadenosine phosphorylase Csac_2326 2442155 - 2441124 - | basic membrane lipoprotein Csac_2327 2443058 - 2442330 - | glutamine amidotransferase Csac_2328 2444404 - 2443064 - | hypothetical protein TERM 2384 2443717 - 2443706 - G 78 -5.8 -4.86621 | opp_overlap 2443706 2443705 ATTCGTAATCAAAAA CCTG CTTT CAGG ATTTTTGTATCCACA TERM 2385 2444108 - 2444074 - G 84 -11.6 -3.14931 | opp_overlap 2444074 2444085, overlap 2444084 GTGATCCCTCATCAA CCTCAAAACAGGCTAT CTC ATAGCTTTTTTTGAGG TTATTTATAAACGCA TERM 2386 2444074 - 2444108 + g 100 -13.8 -4.06419 | opp_overlap 2444074 2444084, overlap 2444085 GTGATCCCTCATCAA CCTCAAAACAGGCTAT CTC ATAGCTTTTTTTGAGG TTATTTATAAACGCA TERM 2387 2444085 - 2444097 + g 91 -6.3 -5.48303 | opp_overlap 2444084 2444074, overlap 2444074 TCAACCTCAAAACAG GCTAT CTC ATAGC TTTTTTTGAGGTTAT TERM 2388 2444449 - 2444465 + r 90 -12.3 -2.83642 | opp_overlap 2444449, overlap 2444446 TCATAAAGATAAAAA GCAAGGC CTT GCCTTGC TAATTCCATTATTTT TERM 2389 2444465 - 2444449 - R 100 -12.3 -5.24799 | opp_overlap 2444449 2444446 TCATAAAGATAAAAA GCAAGGC CTT GCCTTGC TAATTCCATTATTTT Csac_2329 2445355 - 2444480 - | tyrosine recombinase XerD Csac_2330 2445962 - 2445399 - | hypothetical protein Csac_2331 2446339 - 2446016 - | hypothetical protein TERM 2390 2446091 - 2446068 - G 79 -3.2 -5.48213 | opp_overlap 2446062, overlap 2446062 2446070 GATTTAAAATAAAAA TAGTTTATAC TTTT GTAGAAACCA TTTATAATCTTTTTG Csac_2332 2447475 - 2446336 - | stage II sporulation P family protein Csac_2333 2448551 - 2447568 - | germination protease TERM 2391 2447711 - 2447695 - G 88 -8.1 -4.57482 | GGAGTGACAAATAAA TTTCCAT AAT ATGGAAA TATAACCTCTTTGAT TERM 2392 2448635 - 2448670 + r 89 -9 -4.41348 | opp_overlap 2448636, overlap 2448636 2448667 TAAAAACATCTCAAA AGGGAACTGCAGCAAA ATGT TTTGCCACAGTTCCCC TTTCTTTAAAAAGGG TERM 2393 2448636 - 2448669 + r 90 -12.5 -3.24488 | opp_overlap 2448636, overlap 2448635 2448667 AAAAACATCTCAAAA GGGAACTGCAGCAAA ATGT TTTGCCACAGTTCCC CTTTCTTTAAAAAGG TERM 2394 2448669 - 2448636 - R 100 -16.9 -4.24338 | opp_overlap 2448636 2448635 2448667 AAAAACATCTCAAAA GGGAACTGCAGCAAA ATGT TTTGCCACAGTTCCC CTTTCTTTAAAAAGG TERM 2395 2448667 - 2448686 + r 77 -7.9 -4.03546 | opp_overlap 2448636, overlap 2448636 2448635 TGTTTTGCCACAGTT CCCCTTT CTTTAA AAAGGGG TTATTGCTTTTCTTT Csac_2334 2448860 - 2448687 - | hypothetical protein TERM 2396 2448875 - 2448894 + r 87 -7.9 -4.8048 | opp_overlap 2448870, overlap 2448870 AGCCAATAACCCCCT TTGCGGT TTTGTC ACCGCAA TTTTTAATATGCCCA Csac_2335 2450340 - 2448940 - | hypothetical protein TERM 2397 2448973 - 2448985 + g 74 -4.9 -4.79174 | ATTTGGATCTTTTAT TATCT CTA AGATA TTTTCTTCCTTACCT TERM 2398 2449362 - 2449340 - G 81 -5.6 -5.0916 | opp_overlap 2449340 2449343 2449355, overlap 2449343 TGTTTAAGATAAAAA GTATCTACCA TAT TGGTAAATCC TTTGCTCTTTAAAAA TERM 2399 2449421 - 2449407 - G 75 -8.6 -3.53012 | CTTTTGCTCTTGAAA CACCAA TCT TTGGTG CAGAAGTAGCTCTGT Csac_2336 2450953 - 2450396 - | cell wall hydrolase, SleB TERM 2400 2451619 - 2451600 - g 77 -2.8 -5.52384 | overlap 2451604 GCTCCAGGAAAAAAA GTAATACC TCTT GGTATCCC CATTAATCCTTCTTT Csac_2337 2451081 - 2452193 + | monogalactosyldiacylglycerol synthase TERM 2401 2452177 - 2452208 + T 86 -9.4 -4.03978 | opp_overlap 2452178, overlap 2452178 TTGTGGAATTTATAA AGGGAATGGTGCTT TAAA AGGCCCCATTCCCC TTTCTATAAAAGATT TERM 2402 2452207 - 2452178 - T 91 -10.7 -3.97368 | opp_overlap 2452177 2452178 TGTGGAATTTATAAA GGGAATGGTGCTT TAAA AGGCCCCATTCCC CTTTCTATAAAAGAT TERM 2403 2452178 - 2452207 + T 100 -12.9 -3.01905 | opp_overlap 2452178, overlap 2452177 TGTGGAATTTATAAA GGGAATGGTGCTT TAAA AGGCCCCATTCCC CTTTCTATAAAAGAT Csac_2338 2453149 - 2452232 - | peptidase M23B Csac_2339 2453305 - 2453574 + | hypothetical protein Csac_2340 2454943 - 2453648 - | hypothetical protein Csac_2341 2456142 - 2454964 - | carboxyl-terminal protease TERM 2404 2455057 - 2455079 + g 84 -12.2 -2.8071 | opp_overlap 2455062, overlap 2455062 ATACTCTTTTGGCTG TAAAACCTGA ATG TCAGGTTTTA TCCCTTTCTTGTTGA TERM 2405 2455062 - 2455074 + g 84 -7.7 -4.53707 | opp_overlap 2455062, overlap 2455057 CTTTTGGCTGTAAAA CCTGA ATG TCAGG TTTTATCCCTTTCTT TERM 2406 2455074 - 2455062 - G 76 -7.7 -4.07568 | opp_overlap 2455062 2455057 CTTTTGGCTGTAAAA CCTGA ATG TCAGG TTTTATCCCTTTCTT Csac_2342 2457294 - 2456158 - | peptidase M23B TERM 2407 2457045 - 2457058 + g 72 -3.9 -5.02074 | opp_overlap 2457056 TAATCCTGTTCTCAA CAATA AGAA TATTG TTTTTTAACAAATCA TERM 2408 2457283 - 2457268 - G 73 -3.4 -5.24003 | opp_overlap 2457268 AACAAAAACCAAAAA TAAAAT TACA ATTTTA AGTTTTCTCACCAAA TERM 2409 2457328 - 2457307 - R 86 -5.9 -5.40004 | CACCAAAGTAAAAAA CCTCCTTCT CAGA AAAAAGAGG CTATATTAAGCTTTG Csac_2343 2458218 - 2457334 - | hypothetical protein TERM 2410 2458150 - 2458117 - GR 90 -12.5 -3.16267 | opp_overlap 2458116 2458113, overlap 2458101 CCCAACCACAGTTAA GGCTGCTACCACTAT TGAG ATAGAAGCAGCAGCC ATGGTCTTATTTAAA Csac_2344 2458894 - 2458175 - | cell division ATP-binding protein FtsE Csac_2345 2460008 - 2458917 - | transcriptional regulator, CdaR TERM 2411 2459293 - 2459303 + g 70 -6.8 -4.15029 | TAACCAATTTTTAGC GCTG CTT CAGC TTCTTTGTATGACAT TERM 2412 2460134 - 2460104 - R 100 -8.3 -5.45802 | gap 1, opp_overlap 2460101 2460098 2460104, overlap 2460085 TTTTGAAAACAAAAA GCCCCTGCC-ACTT TTAA ATGTAGGCAAGGGC TTATTCTTCTTTTGC TERM 2413 2460104 - 2460134 + r 70 -6.1 -4.20953 | gap 1, opp_overlap 2460085 2460104, overlap 2460101 2460098 TTTTGAAAACAAAAA GCCCCTGCC-ACTT TTAA ATGTAGGCAAGGGC TTATTCTTCTTTTGC Csac_2346 2461262 - 2460150 - | ABC transporter related TERM 2414 2461418 - 2461455 + r 71 -7.9 -3.48696 | gap 1, opp_overlap 2461422, overlap 2461420 2461421 2461450 CTATCTTACCAAAAA CAA-AGGCTGATAAGG AGTTGTA CCTTATCAGCCAATTG TTACTATTGTTGTGA TERM 2415 2461421 - 2461451 + r 75 -9.8 -2.90442 | opp_overlap 2461422, overlap 2461420 2461418 2461450 TCTTACCAAAAACAA AGGCTGATAAGG AGTTGTA CCTTATCAGCCA ATTGTTACTATTGTT TERM 2416 2461450 - 2461422 - R 100 -13.3 -4.91852 | opp_overlap 2461421 2461420 2461418 CTTACCAAAAACAAA GGCTGATAAGG AGTTGTA CCTTATCAGCC AATTGTTACTATTGT Csac_2347 2461734 - 2461459 - | transglycosylase-associated protein Csac_2348 2462433 - 2461798 - | thiamine pyrophosphokinase TERM 2417 2462188 - 2462198 + g 70 -3.2 -4.98672 | GTACTCAACTGCAAT CTGG GTA TCAG TTTTGTCTTTTTCAC Csac_2349 2466673 - 2462465 - | DNA polymerase III, alpha subunit TERM 2418 2464900 - 2464913 + g 70 -3.1 -5.04987 | GCTTATAAAGGTTCT TTAGC CCCT GCTGA TTTTTTACAAGTATT Csac_2350 2467338 - 2466670 - | glycosyl transferase family protein Csac_2351 2468391 - 2467348 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 2419 2468360 - 2468378 + g 100 -7.6 -5.93809 | opp_overlap 2468360 2468358 2468364 TCACCGCCACCAATA TAAAGATT GCC AATCTTTA TTTTTTTTGTCAAAC Csac_2352 2469449 - 2468397 - | putative membrane-associated zinc metalloprotease Csac_2353 2470612 - 2469446 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 2420 2469947 - 2469935 - G 74 -2.7 -5.27335 | TTTGTCAAAGAAAAA CATTG CTT CAATA ACTTCAAAACCTTTG Csac_2354 2471425 - 2470640 - | phosphatidate cytidylyltransferase TERM 2421 2471259 - 2471248 - G 74 -4.4 -5.03409 | TTATAAAAAAAATAA TGCT CGCA AGCA TGCTCAGATACATCA Csac_2355 2472189 - 2471443 - | undecaprenyl diphosphate synthase TERM 2422 2472272 - 2472246 - R 100 -8 -5.47218 | overlap 2472249 TTTGATCTAAAAAAA TAACGGGGATTT TGA AAAACCCCGCCA AATATCTTTTTAAAC TERM 2423 2472269 - 2472249 - R 100 -9.7 -4.8236 | overlap 2472246 GATCTAAAAAAATAA CGGGGATTT TGA AAAACCCCG CCAAATATCTTTTTA Csac_2356 2472842 - 2472288 - | ribosome recycling factor Csac_2357 2473563 - 2472844 - | uridylate kinase TERM 2424 2473552 - 2473562 + g 88 -5.4 -5.5208 | TACCCTTTTGTACTT TGGT TCA ACCA TTTTTTATCTTCTCC TERM 2425 2473670 - 2473641 - R 100 -12.3 -5.40072 | opp_overlap 2473641 TTTTGCTCAAAAAAA GGGAACACCACTT TAAA AAATAGTGTTCCC TTCCCTTGCTATTAT Csac_2358 2474307 - 2473693 - | translation elongation factor Ts TERM 2426 2474224 - 2474239 + g 71 -4.7 -4.62783 | overlap 2474217 TTCCATATCGCCATT GGCAT CTTCTA ATGCC TTTTTGCAATCCATC Csac_2359 2475127 - 2474351 - | ribosomal protein S2 TERM 2427 2475192 - 2475175 - R 90 -9.9 -4.04206 | opp_overlap 2475189, overlap 2475178 CGAGTCGGATAGAAA GAAGGCA ATCT TGCCTTC CACCGAAGATTTCCG TERM 2428 2475374 - 2475403 + r 89 -7.8 -5.03314 | opp_overlap 2475376, overlap 2475375 2475376 AGTCTATATCCAAAA AAGGGTCTTGGC CATTTT GCCAAGACCCCA TTTTTTAGCCATAGC TERM 2429 2475375 - 2475402 + r 93 -11.3 -3.61506 | opp_overlap 2475376, overlap 2475374 2475376 GTCTATATCCAAAAA AGGGTCTTGGC CATTTT GCCAAGACCCC ATTTTTTAGCCATAG TERM 2430 2475401 - 2475376 - R 100 -14.8 -5.1287 | opp_overlap 2475375 2475374 2475376 TCTATATCCAAAAAA GGGTCTTGGC CATTTT GCCAAGACCC CATTTTTTAGCCATA TERM 2431 2475376 - 2475401 + r 100 -14.8 -2.76422 | opp_overlap 2475376, overlap 2475375 2475374 TCTATATCCAAAAAA GGGTCTTGGC CATTTT GCCAAGACCC CATTTTTTAGCCATA Csac_2360 2476706 - 2475426 - | GDP-mannose 6-dehydrogenase Csac_2361 2477865 - 2476699 - | hypothetical protein Csac_2362 2478026 - 2478544 + | hypothetical protein TERM 2432 2478753 - 2478771 + G 80 -10.4 -3.30159 | CTAAATATGTCTATG GCTTTTGT ATT ACAAAAGC TTATAACGGGCTTCA Csac_2363 2478554 - 2479066 + | hypothetical protein TERM 2433 2479043 - 2479071 + F 74 -9.1 -3.09288 | opp_overlap 2479052 2479058, overlap 2479042 AGCTTAATCTTGAAG TTCTTTAAAGAAA TTT TTTCTTAAAAGAA ATTTATTGAAAGGTG TERM 2434 2479311 - 2479332 + G 74 -3.8 -5.1485 | gap 1 GTACTTGGAAGTTTT GCATC-CAT ATGGG ATGAGATGC TTTTTATATTGATTG TERM 2435 2479586 - 2479598 + G 70 -3.4 -4.90217 | ATTTATTTCTGTTTA CATC TTTAT GATG TTTTTGATATCTTTG TERM 2436 2479808 - 2479818 + G 73 -5.4 -4.56914 | TTCAAGAAGGATTTA CTAC TTT GTAG TTTTAATTTCAATGA TERM 2437 2479887 - 2479904 + G 76 -2.1 -5.4505 | gap 1 CTTGCATTTTTAGTA TCCATGAT TTT AT-ATGGA TTTTTTATTGACAAA Csac_2364 2479095 - 2480483 + | O-antigen polymerase TERM 2438 2481013 - 2481028 + G 80 -6.2 -5.02476 | TCTTGAAGTTACATT TGAAGA ATTC TCTTCA TTTTTTGAGAACTCT TERM 2439 2481407 - 2481386 - g 90 -3.9 -5.81412 | gap 1, opp_overlap 2481391, overlap 2481389 TTCATTGAAAAAAAA CAA-TATCTT CAA AAGATAATTG AACAAAATTTAAAGA TERM 2440 2481403 - 2481389 - g 80 -5.8 -4.97383 | opp_overlap 2481391, overlap 2481386 ATTGAAAAAAAACAA TATCTT CAA AAGATA ATTGAACAAAATTTA Csac_2365 2480486 - 2482243 + | fibronectin-binding A domain-containing protein Csac_2366 2482309 - 2483556 + | 6-phosphofructokinase TERM 2441 2483635 - 2483590 - T 88 -3.4 -5.96894 | gap 2, opp_overlap 2483594 2483595, overlap 2483595 ATTGAAATAAAAAAA TAAAAGGGTGCTACCTTGGG AAATACCA CCCA-GGT-GCACCCATTTT TTTAATTTAACTCTC TERM 2442 2483594 - 2483631 + T 86 -4.2 -5.72207 | gap 2, opp_overlap 2483590 2483595, overlap 2483595 AAATAAAAAAATAAA AGGGTGCTACCTTGGG AAATACCA CCCA-GGT-GCACCCA TTTTTTTAATTTAAC TERM 2443 2483630 - 2483595 - T 100 -7.7 -5.64328 | gap 2, opp_overlap 2483594 2483595, overlap 2483590 AATAAAAAAATAAAA GGGTGCTACCTTGGG AAATACCA CCCA-GGT-GCACCC ATTTTTTTAATTTAA TERM 2444 2483595 - 2483630 + T 77 -7.7 -4.01698 | gap 2, opp_overlap 2483595 2483590, overlap 2483594 AATAAAAAAATAAAA GGGTGCTACCTTGGG AAATACCA CCCA-GGT-GCACCC ATTTTTTTAATTTAA Csac_2367 2486142 - 2483650 - | ATPase TERM 2445 2486098 - 2486073 - G 79 -10.5 -3.22298 | gap 1, opp_overlap 2486072 2486073 CGTAGTTATGACCAA GCTCG-GCAGCA GAT TGCTGCGCAAGC ATTATCGCCTTTTCT Csac_2368 2487144 - 2486158 - | ATP:guanido phosphotransferase Csac_2369 2487680 - 2487153 - | UvrB/UvrC protein Csac_2370 2488167 - 2487709 - | transcriptional repressor, CtsR TERM 2446 2489029 - 2489014 - g 88 -4.8 -5.64421 | ACCTCAAATAAAAAA GTTTTT TGAC AAAAAC AAGGTAATATACATT Csac_2371 2488337 - 2489305 + | polysaccharide deacetylase TERM 2447 2489288 - 2489311 + T 100 -12.5 -3.91488 | opp_overlap 2489288, overlap 2489306 CAATTTAAAACAAAA GCCGCATCA TCACAC TGATGCGGC TTATTTAGCCCCATT TERM 2448 2489311 - 2489288 - T 100 -12.5 -5.13343 | opp_overlap 2489288 2489306 CAATTTAAAACAAAA GCCGCATCA TCACAC TGATGCGGC TTATTTAGCCCCATT TERM 2449 2489306 - 2489324 + T 73 -4.5 -5.09259 | opp_overlap 2489288, overlap 2489288 GCATCATCACACTGA TGCGGCT TATTT AGCCCCA TTTTATTTTAACCTG Csac_2372 2489644 - 2489348 - | hypothetical protein TERM 2450 2489683 - 2489715 + r 82 -6.3 -4.93365 | GATTTAGATTTTTCT GACGTCTATTGTTCA CCC TGAACAACCAACGTC TTTTTAATTATAACC Csac_2373 2491855 - 2489771 - | elongation factor G TERM 2451 2491566 - 2491552 - G 76 -6.4 -4.36411 | overlap 2491553 CACCAATTACCAAAA CTGCAG ACT CTGCAA CATGTATAGCTTCAC TERM 2452 2492887 - 2492875 - g 73 -3.3 -5.19328 | overlap 2492876 AGTTTACAAGAAAAA GGTGG TGC CCACT AAAGCAGCTGATTAC Csac_2374 2492111 - 2493163 + | metal dependent phosphohydrolase Csac_2375 2494186 - 2493176 - | metalloendopeptidase glycoprotease family TERM 2453 2494239 - 2494255 + H 83 -8.1 -4.27617 | opp_overlap 2494239 AACGTTTTTATTATA CCAAATT TTT AATTTGG TTTTAATAAAATATA Csac_2376 2494329 - 2495123 + | putative undecaprenol kinase Csac_2377 2496066 - 2495092 - | uncharacterized membrane protein TERM 2454 2495481 - 2495494 + g 73 -3.1 -5.20154 | CAACTTTTAGTTCTC TGGGT TTAA ACCTA TTTTTTAACTTATAT TERM 2455 2495904 - 2495882 - G 74 -9.4 -2.95081 | opp_overlap 2495881, overlap 2495877 CTATTTAAAATACCA TTTTCAAATA CAC TATTTGAAAA GTATAATAGAATCAA Csac_2378 2496159 - 2496785 + | uncharacterized membrane-associated protein Csac_2379 2496839 - 2498044 + | acetylornithine and succinylornithine aminotransferase Csac_2380 2498022 - 2498585 + | phage SPO1 DNA polymerase-related protein TERM 2456 2498581 - 2498631 + T 79 -7.1 -4.46581 | gap 1, opp_overlap 2498588, overlap 2498588 AAGAAATGATTCAAT TTTAAAAGGGCTGTAAACAACCTA TGTA TAAGC-GTTTACAGCCCTTTCGAA TTTTATGGAATTTTA TERM 2457 2498588 - 2498624 + T 72 -7.4 -3.786 | gap 1, opp_overlap 2498588, overlap 2498581 GATTCAATTTTAAAA GGGCTGTAAACAACCTA TGTA TAAGC-GTTTACAGCCC TTTCGAATTTTATGG TERM 2458 2498624 - 2498588 - T 100 -11.8 -4.19953 | gap 1, opp_overlap 2498588 2498581 GATTCAATTTTAAAA GGGCTGTAAACAACCTA TGTA TAAGC-GTTTACAGCCC TTTCGAATTTTATGG Csac_2381 2500361 - 2498634 - | S-layer domain-containing protein TERM 2459 2500878 - 2500841 - g 73 -9.3 -2.82834 | opp_overlap 2500840 2500841 TAGTTTAGCAGGATA TGTTGCTTCTAACCGCA AACC TGTGGTTATAAACAACA CTTTATCTTTACCTG TERM 2460 2500841 - 2500878 + G 75 -9.3 -3.20303 | opp_overlap 2500841, overlap 2500840 TAGTTTAGCAGGATA TGTTGCTTCTAACCGCA AACC TGTGGTTATAAACAACA CTTTATCTTTACCTG TERM 2461 2501266 - 2501251 - g 72 -7.6 -3.6471 | CTTTAAATGATATAA TGCTGA CAGG TCAGCA AAAGTTCATAGAGTA Csac_2382 2500557 - 2501705 + | GAF domain-containing protein Csac_2383 2501750 - 2502481 + | beta-lactamase superfamily hydrolase Csac_2384 2502478 - 2503683 + | diguanylate cyclase TERM 2462 2503697 - 2503667 - T 100 -8.3 -6.17669 | opp_overlap 2503672, overlap 2503668 2503669 AAGAAAAGAAAAAAA GTCGACCCTCATA TTAAT TATGAGGGTCGTT CAAAATATATAAAGG TERM 2463 2503696 - 2503668 - T 100 -11.8 -4.25111 | opp_overlap 2503672, overlap 2503667 2503669 AGAAAAGAAAAAAAG TCGACCCTCATA TTAAT TATGAGGGTCGT TCAAAATATATAAAG TERM 2464 2503695 - 2503669 - T 100 -15.3 -3.11406 | opp_overlap 2503672, overlap 2503668 2503667 GAAAAGAAAAAAAGT CGACCCTCATA TTAAT TATGAGGGTCG TTCAAAATATATAAA TERM 2465 2503672 - 2503692 + T 74 -9.8 -2.7317 | opp_overlap 2503669 2503668 2503667 AAGAAAAAAAGTCGA CCCTCATA TTAAT TATGAGGG TCGTTCAAAATATAT Csac_2385 2504165 - 2503746 - | hypothetical protein TERM 2466 2504189 - 2504210 + H 74 -8.8 -3.32022 | opp_overlap 2504196 ACACCCCCTTTAAGT TGAGCAAG CAAAGC CTTGCTCA TTAATATATCAAAAG TERM 2467 2504225 - 2504250 + H 81 -10.4 -2.87344 | opp_overlap 2504225 ATTAATATATCAAAA GGCACCTGAC ATTTTA GCCAGGTGCC TCTCTGCCAAAGGTA TERM 2468 2504250 - 2504225 - H 100 -12.6 -4.43815 | opp_overlap 2504225 ATTAATATATCAAAA GGCACCTGAC ATTTTA GCCAGGTGCC TCTCTGCCAAAGGTA TERM 2469 2505635 - 2505617 - g 100 -6.8 -5.96219 | opp_overlap 2505617 GACTTAGAAAAAAAA GAAATCTG TTT CAAATTTC TTTCTATCATTCTGC TERM 2470 2505754 - 2505765 + G 77 -3 -5.44837 | ATTTTTTGATGCTTT TTTG AGCT CAAA TTTTTCTATTTTTTT TERM 2471 2507642 - 2507655 + G 74 -3.9 -5.08824 | AAGGCAGAGTTTTTT TTGTT GACG AACAA TTTTTTGGATGCAGA Csac_2386 2504543 - 2508004 + | putative adenylate/guanylate cyclase TERM 2472 2508399 - 2508419 + TF 72 -2.7 -5.37345 | TTTTTATCCGTTGCA TTTTTAATT TGC AATTAACAA TTTTTTGTCATTAAA TERM 2473 2509334 - 2509320 - gT 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 2474 2509871 - 2509856 - gT 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_2389 2510412 - 2509894 - | IstB ATP binding domain-containing protein Csac_2388 2508735 - 2509964 + | transposase, mutator type Csac_2390 2510732 - 2510409 - | hypothetical protein Csac_2391 2511835 - 2510705 - | hypothetical protein TERM 2475 2511847 - 2511861 + r 77 -4.2 -5.38398 | TCATAGTAGGCTGTC CTCCCA TCC TGGTAG TTTTTCTATTTTTCT Csac_2392 2513159 - 2511939 - | integrase catalytic subunit TERM 2476 2516307 - 2516324 + r 72 -2.7 -5.41359 | GATAAGACTTTCCTT GAGCTTT TGAA AGAGTTC TTTTTTGCTTTCGTT TERM 2477 2519403 - 2519388 - R 74 -7.6 -3.81958 | opp_overlap 2519388, overlap 2519386 ACTGCGAAATAAATA TGTCTC TGAC GAGACA TTGTCAACGTTTACA Csac_2393 2521873 - 2520587 - | transposase IS116/IS110/IS902 family protein TERM 2478 2522961 - 2522975 + r 72 -8.6 -3.08813 | opp_overlap 2522961 2522960 2522968, overlap 2522966 2522968 AGATAAGACACGAAG CGATGA AGC TCATCG TGTGTTCACATGAGC TERM 2479 2523882 - 2523893 + r 74 -5.8 -4.5442 | GTTCAGATAAGACGT GCCA GTTT TGGC TTTTCTAATTACACA TERM 2480 2523977 - 2523955 - R 82 -2.7 -5.94597 | gap 1, overlap 2523958 TAAGACCAAAAAAAA TAAGCTCAGC TATT GCTGAGCA-A CTATAGTTTACATCC TERM 2481 2523975 - 2523958 - R 100 -11.3 -4.99643 | overlap 2523955 GACCAAAAAAAATAA GCTCAGC TATT GCTGAGC AACTATAGTTTACAT Csac_2394 2525034 - 2524810 - | CRISPR-associated Cas2 family protein Csac_2395 2526308 - 2525328 - | CRISPR-associated Cas1 family protein Csac_2396 2526829 - 2526314 - | CRISPR-associated Cas4 family protein Csac_2397 2529186 - 2526859 - | CRISPR-associated helicase Cas3 TERM 2482 2527159 - 2527169 + g 72 -4 -5.06505 | ATCCCTAAAAATCTT TTGA GCT TCAA TTTTTCTATCTGCTT Csac_2398 2529922 - 2529173 - | CRISPR-associated Cas5 family protein TERM 2483 2529317 - 2529333 + g 76 -5.1 -4.9725 | opp_overlap 2529317 TTTATTCGTAAATAT CCTAAGA CCA TCTTTGG TTTTTATATAACGAT Csac_2399 2530854 - 2529925 - | CRISPR-associated autoregulator DevR family protein protein TERM 2484 2530506 - 2530538 + g 80 -9.9 -3.58905 | opp_overlap 2530505 2530507, overlap 2530507 2530509 TATACTCTTCTAAAG AGACAGCAGGTGTTA TTT TGACAACTGCTGTCC TTGTCTGTGCACCCT TERM 2485 2530507 - 2530537 + g 88 -13.4 -2.75022 | opp_overlap 2530507 2530505, overlap 2530506 2530509 ATACTCTTCTAAAGA GACAGCAGGTGTTA TTT TGACAACTGCTGTC CTTGTCTGTGCACCC TERM 2486 2530537 - 2530507 - G 82 -11.2 -3.35224 | opp_overlap 2530506 2530507 2530509, overlap 2530505 ATACTCTTCTAAAGA GACAGCAGGTGTTA TTT TGACAACTGCTGTC CTTGTCTGTGCACCC TERM 2487 2530509 - 2530535 + g 75 -10.2 -2.91997 | opp_overlap 2530507 2530505, overlap 2530507 2530506 ACTCTTCTAAAGAGA CAGCAGGTGTTA TTT TGACAACTGCTG TCCTTGTCTGTGCAC Csac_2400 2532491 - 2530851 - | CRISPR-associated Cst1 family protein TERM 2488 2531933 - 2531955 + g 73 -3.5 -5.14698 | CCTTCTCTATTATAG GTTTTTCAA AGTCG TTGTAAAAC TTTTCTTTTAGGTTT Csac_2401 2533309 - 2532524 - | CRISPR-associated Cas family protein Csac_2402 2534294 - 2534926 + | NADPH-dependent FMN reductase TERM 2489 2535362 - 2535373 + T 71 -2.2 -5.43553 | AAATGTTCCAACCCC CCTA CACC TGGG TTTTCTTTTTTAAAT TERM 2490 2535462 - 2535433 - T 77 -4.3 -5.31059 | opp_overlap 2535433 AGACTAAGTAAAAAA GAGGCTACC TTTCTTTTTGTG GGCAGCCTC TTTTTAGTTTTTTAT Csac_2403 2537198 - 2535474 - | peptidase M23B TERM 2491 2536047 - 2536063 + g 73 -9.5 -2.85407 | overlap 2536046 2536049 TGACTTTATCACCTT TACTTCC TTT GGAAGTA CTTCTTCATACTCTA TERM 2492 2537242 - 2537226 - R 79 -3.7 -5.69262 | opp_overlap 2537226 TTACAAAAACAAAAA GGGTA TTAATGT TACCC TTATATAATTTATAC Csac_2404 2538817 - 2537369 - | glycoside hydrolase family protein Csac_2405 2539789 - 2538851 - | endo-1,4-beta-xylanase Csac_2406 2540082 - 2539789 - | hypothetical protein Csac_2407 2541023 - 2540223 - | putative esterase Csac_2408 2542070 - 2541057 - | endo-1,4-beta-xylanase Csac_2409 2543612 - 2542107 - | xylan 1,4-beta-xylosidase Csac_2410 2545753 - 2543651 - | cellulose 1,4-beta-cellobiosidase Csac_2411 2549812 - 2545769 - | carbohydrate-binding family 6 protein TERM 2493 2546416 - 2546427 + g 73 -5.8 -4.51777 | CCTTGTATTCCCACG GTCC CATT GGAC TTTTGCTTGTCATGT TERM 2494 2549886 - 2549839 - R 100 -16.7 -3.35813 | gap 1, opp_overlap 2549849, overlap 2549844 CCTTATCTTAATTAA TTGA-ATTTAAGGCATGCTCCA AAAAG TGGAGCATGCCTTAAATCTCCA AAATCACTACTCAAT TERM 2495 2549880 - 2549844 - R 100 -21.2 -3.23899 | opp_overlap 2549849, overlap 2549839 TCTTAATTAATTGAA TTTAAGGCATGCTCCA AAAAG TGGAGCATGCCTTAAA TCTCCAAAATCACTA TERM 2496 2549849 - 2549875 + r 100 -16.7 -3.1247 | opp_overlap 2549844 2549839 ATTAATTGAATTTAA GGCATGCTCCA AAAAG TGGAGCATGCC TTAAATCTCCAAAAT Csac_2412 2551677 - 2549893 - | extracellular solute-binding protein TERM 2497 2550116 - 2550126 + g 73 -6.8 -4.19276 | overlap 2550118 ACTGTGGTCTTACCT GCTG TTA CAGC TTTTAACACTTTTAC TERM 2498 2551651 - 2551661 + g 70 -2.6 -5.0925 | opp_overlap 2551651 TACAATAGAAACAAG TTTT TTG AAAA TTTTTGATTTTAGCA Csac_2413 2552775 - 2551756 - | binding-protein-dependent transport systems inner membrane component TERM 2499 2551955 - 2551941 - G 73 -7.2 -4.18018 | TCCTGTTATTTAAAA CAGTTA GCA TAACTG AAATCGGAAGGTTTT Csac_2414 2553740 - 2552820 - | binding-protein-dependent transport systems inner membrane component Csac_2415 2555963 - 2553756 - | hypothetical protein Csac_2416 2558119 - 2555993 - | hypothetical protein TERM 2500 2557703 - 2557675 - G 73 -6.7 -4.3129 | overlap 2557699 GATTTACTACTAAAA CTACCTTTGCACC CTT GTCGCAAATGTAG ATAAAACCGTCTTTA Csac_2417 2559038 - 2558175 - | binding-protein-dependent transport systems inner membrane component Csac_2418 2559971 - 2559078 - | binding-protein-dependent transport systems inner membrane component Csac_2419 2562880 - 2560025 - | extracellular solute-binding protein TERM 2501 2560567 - 2560542 - G 70 -8.3 -3.30771 | opp_overlap 2560541 TTATATGTTGTATAA GGTGCAATACC CAGA GGCATTTCACC AGTTCTGAACCTATT TERM 2502 2562031 - 2562045 + g 74 -10 -2.70128 | opp_overlap 2562029, overlap 2562030 2562027 ACATCCCAGGATATC GCCAGT TCC ACTGGC CTATTGTATTTAATC Csac_2420 2563491 - 2563733 + | AbrB family transcriptional regulator TERM 2503 2563759 - 2563802 + T 91 -7.6 -5.15634 | gap 1, opp_overlap 2563765, overlap 2563765 GGAAAATATTTTTAA GTG-AAAGGGTAGGGCTATTT TTT AAAGAGCTCTACCCTTTATTC TTTTTTACTAAAATC TERM 2504 2563765 - 2563795 + T 100 -13.4 -4.84182 | opp_overlap 2563765, overlap 2563759 TATTTTTAAGTGAAA GGGTAGGGCTATTT TTT AAAGAGCTCTACCC TTTATTCTTTTTTAC TERM 2505 2563795 - 2563765 - T 89 -11.2 -3.75629 | opp_overlap 2563765 2563759 TATTTTTAAGTGAAA GGGTAGGGCTATTT TTT AAAGAGCTCTACCC TTTATTCTTTTTTAC Csac_2421 2564657 - 2563797 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 2506 2564582 - 2564596 + g 71 -5 -4.65168 | overlap 2564579 AGTCTACTATATTTA GAGTAT CTA ATGCTC TTTTTGACATATCAT Csac_2422 2565377 - 2564664 - | O-methyltransferase-like protein TERM 2507 2564732 - 2564720 - G 74 -4.8 -4.87665 | opp_overlap 2564711 2564726 TCTCATCCACAAAAA GTGG TTTGT CCAC CTTAAGTGTACACTG TERM 2508 2565518 - 2565504 - H 70 -7.2 -3.63744 | overlap 2565502 GTGTCCTTGAAAATA TTTGAC AAT GTCAAA GAGGAGATTTGTTAT Csac_2423 2565532 - 2565918 + | response regulator receiver protein TERM 2509 2565928 - 2565903 - T 85 -6.9 -4.99972 | opp_overlap 2565903 2565897 2565904, overlap 2565904 ACAAAACAGCAAAAA CGGGGCTAT AAAATAAA ATAGCCCCA TTATGGTTTTTACTA TERM 2510 2565927 - 2565904 - T 75 -8.2 -3.57543 | opp_overlap 2565904 2565903 2565897, overlap 2565903 CAAAACAGCAAAAAC GGGGCTAT AAAATAAA ATAGCCCC ATTATGGTTTTTACT thiH 2567399 - 2565966 - | thiamine biosynthesis protein ThiH Csac_2425 2567666 - 2567421 - | CopG family transcriptional regulator TERM 2511 2568911 - 2568923 + G 74 -4.9 -4.74132 | GTACATTCATCATCC TTTAG CAA CTAAA TTTTTGATAGGCTAT Csac_2426 2568027 - 2569124 + | glycosyl transferase family protein Csac_2427 2569127 - 2569753 + | hypothetical protein Csac_2428 2569902 - 2571572 + | alpha amylase, catalytic region TERM 2512 2572119 - 2572136 + G 78 -9.9 -3.31144 | opp_overlap 2572122, overlap 2572122 GATTTACGTCTACTA TAAGGGC ACCT GCCCTTA TTGTAAGAATAAAAA Csac_2429 2571748 - 2572158 + | ferric uptake regulator family protein Csac_2430 2572182 - 2572718 + | rubrerythrin TERM 2513 2572745 - 2572779 + T 77 -10.1 -2.57876 | opp_overlap 2572746, overlap 2572744 2572743 TGACAAAATTAATAA ATAGGCTGTCGCA GTAAAAATG TGCGACAGCCTAA AATTTTGTAGATTTT TERM 2514 2572778 - 2572746 - T 100 -13.6 -4.48176 | opp_overlap 2572745 2572744 2572743 GACAAAATTAATAAA TAGGCTGTCGCA GTAAAAATG TGCGACAGCCTA AAATTTTGTAGATTT Csac_2431 2573082 - 2572807 - | hypothetical protein Csac_2432 2573336 - 2574484 + | hypothetical protein TERM 2515 2574546 - 2574506 - T 72 -8.6 -3.11302 | opp_overlap 2574507, overlap 2574497 2574505 2574511 TTAAGACTTTAAAAC TTAAAGAGGAGTTATT CTAAGATGT AATAACTCCTCTTTAT TTTTATTTTTTAATT TERM 2516 2574507 - 2574545 + T 100 -14.2 -5.77571 | opp_overlap 2574497 2574506 2574505 2574511 TAAGACTTTAAAACT TAAAGAGGAGTTATTCTA AGA TGTAATAACTCCTCTTTA TTTTTATTTTTTAAT TERM 2517 2574541 - 2574511 - T 79 -8.5 -3.93061 | opp_overlap 2574507, overlap 2574506 2574505 ACTTTAAAACTTAAA GAGGAGTTATT CTAAGATGT AATAACTCCTC TTTATTTTTATTTTT Csac_2433 2575353 - 2574556 - | abortive infection protein TERM 2518 2574790 - 2574772 - G 78 -6 -4.81357 | overlap 2574773 ACAGTACAAAACAAA CGCTGAAA ATA TTCCAGCA AAAAAAGCATCCATT TERM 2519 2575150 - 2575160 + g 74 -2.6 -5.29716 | AAAATTACATATCTC TAAA ATA TTTA TTTTTCTTCTCTTCA TERM 2520 2575216 - 2575204 - G 73 -5.5 -4.54753 | AAATACTAAAAATAA CAGGA AAG TCCCG ATGTAATATATAATA Csac_2434 2577109 - 2575421 - | hypothetical protein TERM 2521 2575845 - 2575864 + g 80 -2.2 -5.64274 | AAAGCTAAATACGCT CCTTTT TTAATATC AAAAGG TTTTTTTATCGGTAA TERM 2522 2576734 - 2576715 - G 76 -2.2 -5.44638 | opp_overlap 2576715 ATAACAAAAATAAAA TATGTTTT CGCA AAAGCATA TGTCTTATCATCAAC Csac_2435 2577884 - 2577099 - | ABC transporter related TERM 2523 2577442 - 2577458 + g 78 -3.7 -5.33405 | opp_overlap 2577442 GGGTTGTGAATTAAG CTTGAAA TAA TTGCAAG TTTTTGTTTCATACC TERM 2524 2577994 - 2577957 - R 100 -8.6 -5.61881 | GTTTAAAAACAAAAA GGCTAAAACCTCTG TTTCCCCATC CAGAAGCTTTAGCC CTAATAAGCATTATT Csac_2436 2578994 - 2578029 - | Acetyl xylan esterase TERM 2525 2579160 - 2579132 - R 83 -4.6 -5.65496 | TATCAAAAACAAAAA GGCTGCTACA CGCATTTTC TGCAACAGCC TTAATTGTTAGCTCT Csac_2437 2580831 - 2579161 - | phosphoenolpyruvate-protein phosphotransferase Csac_2438 2581116 - 2580856 - | phosphotransferase system, phosphocarrier protein HPr TERM 2526 2581176 - 2581161 - R 100 -10.4 -4.95547 | opp_overlap 2581160 2581156 TTTACAAGAAGAAAA GGCAGG CTGC CCTGCC CTACCTTTATACCTT Csac_2439 2582544 - 2581183 - | PTS system, fructose subfamily, IIC subunit TERM 2527 2581923 - 2581913 - G 73 -3.2 -5.09225 | ATGCCACCTAAAAAA CCTG CTC CAAG CTTATTTGCTAAAAG Csac_2440 2583012 - 2582563 - | putative PTS IIA-like nitrogen-regulatory protein PtsN Csac_2441 2583949 - 2583017 - | ribokinase-like domain-containing protein TERM 2528 2583388 - 2583376 - G 78 -6.3 -4.81551 | CATCTACATCAAAAA GAGTT TTA AACTC ATGGATGTTAGGCTT Csac_2442 2584733 - 2583975 - | DeoR family transcriptional regulator TERM 2529 2584999 - 2584974 - R 76 -5.4 -4.98531 | opp_overlap 2584974 TGTGCAAATTAAAAA GGACCGCT GCTCACGCTT AGCGGCCC TTGAATTTGTATTAT Csac_2443 2585891 - 2585577 - | hypothetical protein TERM 2530 2586122 - 2586110 - H 77 -7.7 -4.05446 | opp_overlap 2586110 2586109 TTGTTTAAGTACAAA GGCTT ACC AAGCC AATTTTCTAATATGG TERM 2531 2586482 - 2586496 + G 74 -3.6 -5.1523 | overlap 2586477 GCTTTGGCAGTTGCT GAAAGT AAA ATTTTC TTTTTGTATTCTGCA Csac_2444 2586167 - 2586523 + | hypothetical protein TERM 2532 2586727 - 2586692 - T 100 -12 -4.86731 | opp_overlap 2586695, overlap 2586695 TTTTTTCAAATAAAA CAAGGGACTGTTCCAA AAAT TTGCAACAGTCCCTTC TACCATAAGCCAGTT TERM 2533 2586724 - 2586695 - T 100 -13.7 -4.54026 | opp_overlap 2586695, overlap 2586692 TTTCAAATAAAACAA GGGACTGTTCCAA AAAT TTGCAACAGTCCC TTCTACCATAAGCCA TERM 2534 2586695 - 2586724 + T 100 -13.7 -3.32844 | opp_overlap 2586695 2586692 TTTCAAATAAAACAA GGGACTGTTCCAA AAAT TTGCAACAGTCCC TTCTACCATAAGCCA Csac_2445 2589984 - 2586757 - | S-layer domain-containing protein TERM 2535 2587467 - 2587481 + g 73 -8.6 -3.38782 | overlap 2587466 GCCCATATTTTGCGC CAAGCT CCA AGCTTG TGTTCTGGTTTGATG TERM 2536 2589187 - 2589203 + g 84 -5.1 -5.29716 | overlap 2589189 AAGCATGTACTTTTT CCCAACT TCA AGTTGCG TTTTTGTTGTGTTAA Csac_2446 2591183 - 2590005 - | hypothetical protein Csac_2447 2591864 - 2591187 - | ABC transporter related Csac_2448 2593886 - 2591889 - | RND family efflux transporter MFP subunit TERM 2537 2593667 - 2593637 - G 72 -8.2 -3.53745 | overlap 2593633 2593638 TAGATGTCAAATCAA CGCTCTGAGCAGAC TCA ATCGGCCCAGAGCC CGAAACGGTGACAGT TERM 2538 2593666 - 2593638 - G 81 -11.7 -2.71765 | overlap 2593637 2593633 AGATGTCAAATCAAC GCTCTGAGCAGAC TCA ATCGGCCCAGAGC CCGAAACGGTGACAG Csac_2449 2594754 - 2593921 - | hypothetical protein TERM 2539 2595236 - 2595225 - g 71 -4.4 -4.72986 | overlap 2595210 CAGCTTTATGAAAAA CTGT TGAA ACAG TACAATAGTTTAAAG Csac_2450 2595141 - 2595944 + | hypothetical protein TERM 2540 2596012 - 2595959 - T 100 -19.4 -2.78395 | opp_overlap 2595963 2595968 2595973 2596006, overlap 2595968 2595973 AATCTTTATGAATGA TAAACAAAATAAAAGAGGGTGAGA ATTAAA TCTCACCCTCTTTTATTTAATTTA TTAATTATTATTTCC TERM 2541 2595963 - 2596008 + T 100 -13.6 -4.4078 | opp_overlap 2595959 2595968 2595973, overlap 2595968 2595973 2596006 TTTATGAATGATAAA CAAAATAAAAGAGGGTGAGA ATTAAA TCTCACCCTCTTTTATTTAA TTTATTAATTATTAT TERM 2542 2595968 - 2596003 + T 100 -17.9 -4.23652 | opp_overlap 2595959 2595968 2595973, overlap 2595963 2595973 GAATGATAAACAAAA TAAAAGAGGGTGAGA ATTAAA TCTCACCCTCTTTTA TTTAATTTATTAATT TERM 2543 2596003 - 2595968 - T 100 -17.9 -5.04733 | opp_overlap 2595968 2595963 2595973, overlap 2595959 2595973 GAATGATAAACAAAA TAAAAGAGGGTGAGA ATTAAA TCTCACCCTCTTTTA TTTAATTTATTAATT TERM 2544 2595973 - 2595998 + T 100 -13.4 -5.06223 | opp_overlap 2595968 2595959 2595973, overlap 2595968 2595963 ATAAACAAAATAAAA GAGGGTGAGA ATTAAA TCTCACCCTC TTTTATTTAATTTAT TERM 2545 2595998 - 2595973 - T 100 -13.4 -5.3689 | opp_overlap 2595973 2595968 2595963, overlap 2595968 2595959 ATAAACAAAATAAAA GAGGGTGAGA ATTAAA TCTCACCCTC TTTTATTTAATTTAT Csac_2451 2599070 - 2596020 - | S-layer domain-containing protein Csac_2452 2601393 - 2599252 - | methyl-accepting chemotaxis sensory transducer TERM 2546 2600985 - 2600999 + g 71 -8.6 -3.22491 | GAATATATACGCCTG CGAACA TAT TGTTCG TTACTAATAAACTTT Csac_2453 2602808 - 2601627 - | extracellular ligand-binding receptor TERM 2547 2602903 - 2602866 - R 95 -8.5 -5.1861 | gap 1, opp_overlap 2602890 2602890 2602899 TGCAGTATCAAAAAA GGGCAAAGGAAAACCTCT TCA AAAGGCCA-CCTTTGCCC TTTTGTGCATATCTT Csac_2454 2604019 - 2602994 - | helix-turn-helix domain-containing protein Csac_2455 2604248 - 2604009 - | hypothetical protein TERM 2548 2604515 - 2604501 - R 74 -8.6 -3.3334 | AATCTTACTTCATAA CCTCAA ACC TTGAGG TAAACTCCAAAAGCT Csac_2456 2605485 - 2604490 - | pyruvate carboxyltransferase Csac_2457 2606286 - 2605522 - | binding-protein-dependent transport systems inner membrane component Csac_2458 2607140 - 2606334 - | molybdenum ABC transporter, periplasmic molybdate-binding protein Csac_2459 2607512 - 2607180 - | dinitrogenase iron-molybdenum cofactor biosynthesis protein Csac_2460 2608342 - 2607539 - | radical SAM domain-containing protein Csac_2461 2609633 - 2608344 - | nitrogenase TERM 2549 2608943 - 2608927 - G 76 -9.5 -3.42768 | opp_overlap 2608926 2608927, overlap 2608913 2608919 AGTAAAAGTCCAGAA CTTTTGC AAA GCAAAAG ATTTAGTCTTGCATT TERM 2550 2608927 - 2608943 + g 74 -9.5 -2.96189 | opp_overlap 2608913 2608927 2608919, overlap 2608926 AGTAAAAGTCCAGAA CTTTTGC AAA GCAAAAG ATTTAGTCTTGCATT TERM 2551 2609539 - 2609504 - G 88 -13.4 -2.72991 | gap 1, opp_overlap 2609533 2609537 TGATAGGGGCAAGTA CCCAGCGCGCACCGT TAAAGGT ACA-TGCGCGCTGGG ACATAATCCCTGGGA Csac_2462 2611049 - 2609670 - | nitrogenase Csac_2463 2612416 - 2611022 - | nitrogenase component I, alpha chain TERM 2552 2611959 - 2611969 + gr 78 -5.4 -5.02074 | ACCGGTTTTCCAATT GCTT TTG AAGC TTTTTTAGCAACTGC Csac_2464 2612821 - 2612447 - | nitrogen regulatory protein P-II TERM 2553 2612730 - 2612768 + g 78 -8.9 -3.79419 | gap 1 CGCCCCAATACTTTT TGGAATG-TGGCAGCAGG ATAC CCTGCTGCCGCCAGTACA TCTTTTGTCACGCCA Csac_2465 2613177 - 2612860 - | nitrogen regulatory protein P-II Csac_2466 2614043 - 2613222 - | nitrogenase iron protein TERM 2554 2614461 - 2614475 + r 86 -5.8 -5.44119 | opp_overlap 2614460, overlap 2614473 CAAAATATATTAAGT TAAACT TCG AGTTTA TTTTTTTAAAATAGG ureC 2616193 - 2614481 - | urease subunit alpha Csac_2468 2616520 - 2616209 - | urease, beta subunit TERM 2555 2617258 - 2617244 - g 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 2556 2617795 - 2617780 - g 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_2469 2616659 - 2617888 + | transposase, mutator type Csac_2470 2618170 - 2617895 - | urease, gamma subunit Csac_2471 2618900 - 2618220 - | ABC transporter related Csac_2472 2619648 - 2618884 - | ABC transporter related TERM 2557 2619225 - 2619237 + g 90 -2.7 -5.97575 | GAGATAGGTTTTGTG CTTTT TCT GAAAG TTTTTTTTCTAAATT Csac_2473 2620720 - 2619677 - | inner-membrane translocator Csac_2474 2621650 - 2620739 - | inner-membrane translocator Csac_2475 2622924 - 2621677 - | extracellular ligand-binding receptor TERM 2558 2621727 - 2621739 + g 75 -5.5 -4.8743 | CTTTTAGGTACGGAT CTGGT TTT ACCGG TTTATTTGTTTTCCA Csac_2476 2623449 - 2623111 - | nitrogen regulatory protein P-II Csac_2477 2624831 - 2623494 - | ammonium transporter TERM 2559 2624433 - 2624400 - G 77 -10.3 -2.84812 | opp_overlap 2624407, overlap 2624402 2624405 AGCCATAGCACCAGA GACAATCGTTGCGGC TGTT GCCGCAAATACTGTC TGGAACATCAAGAAT TERM 2560 2624982 - 2624972 - H 77 -4 -5.41359 | AAGTAAAGGAAAAAA CATT GCA AATG GGTTGTGTGCAGAGT TERM 2561 2625054 - 2625086 + H 93 -8.5 -4.86861 | gap 1, opp_overlap 2625054, overlap 2625071 GTGCTAAATAAAAAA GGCAAAGGCAACCT CTTGAA AGGC-GCCTTTGCC TTTCTTTCTTTATTC TERM 2562 2625086 - 2625054 - H 100 -11.4 -5.63517 | gap 1, opp_overlap 2625054 2625071 GTGCTAAATAAAAAA GGCAAAGGCAACCTC TTGA AAGGC-GCCTTTGCC TTTCTTTCTTTATTC TERM 2563 2625071 - 2625090 + H 93 -8.6 -4.77442 | opp_overlap 2625054, overlap 2625054 CAAAGGCAACCTCTT GAAAGGCG CCTT TGCCTTTC TTTCTTTATTCTCTT Csac_2478 2625467 - 2625787 + | hypothetical protein Csac_2479 2625784 - 2626122 + | hypothetical protein TERM 2564 2626149 - 2626127 - T 71 -8.5 -2.79684 | gap 1, overlap 2626115 CTACCAAGTGAACTA CCATCCACCT GAAG AGGTGGA-GG CTTCGCGAGAAGTTT Csac_2480 2627391 - 2626174 - | IS605 family transposase OrfB TERM 2565 2627437 - 2627458 + r 91 -11.7 -3.55605 | opp_overlap 2627433 2627436, overlap 2627435 2627449 TTATTAGCAATTCAT CTCCATCTT GTAG AAGATGGAG TCTTCTTGCTTTATT Csac_2481 2628101 - 2627496 - | methyltransferase type 11 TERM 2566 2628213 - 2628160 - R 76 -5.4 -5.00895 | gap 1, opp_overlap 2628166, overlap 2628166 TGCATGAGACAAAAA GCAAAAGCCCACAAAAGGAAAATTC GAGAT GCTTCTTCCCTTCGTGGGC-TTTGT TATTCTATATTGTTT TERM 2567 2628208 - 2628166 - R 100 -9.9 -4.84033 | opp_overlap 2628166, overlap 2628160 AGACAAAAAGCAAAA GCCCACAAAAGGAAAATTC GAGAT GCTTCTTCCCTTCGTGGGC TTTGTTATTCTATAT Csac_2482 2629441 - 2628305 - | sodium ion-translocating decarboxylase, beta subunit TERM 2568 2629113 - 2629103 - G 73 -5.4 -4.68994 | AGCAGCACCCAAAAA CAAG CTG CTTG GCATTGCAATTAGTG Csac_2483 2629817 - 2629467 - | biotin/lipoyl attachment domain-containing protein TERM 2569 2629868 - 2629879 + r 78 -5.8 -4.90918 | TCAAAACATTTTTTA CCTG TTAA CAGG TTTTATTGATTTTAT Csac_2484 2630233 - 2629865 - | sodium pump decarboxylase, gamma subunit Csac_2485 2631649 - 2630255 - | hypothetical protein TERM 2570 2630468 - 2630480 + g 70 -3.3 -5.02074 | TTCAATCGGCTTTTC GCTGC CAA GCACC TTTTTTACAAGCTCA TERM 2571 2631914 - 2631887 - R 100 -10.6 -5.49579 | opp_overlap 2631887 2631882 2631903 CTACAAAAAATAAAA GCGCTTTGAGGC TACC ACCCCAAAACGC CTTTGTTTTGGAGAA Csac_2486 2632969 - 2631992 - | hypothetical protein Csac_2487 2634642 - 2633107 - | methyl-accepting chemotaxis sensory transducer TERM 2572 2633397 - 2633440 + g 70 -5.4 -4.39407 | gap 1, overlap 2633405 TAACCTCTTTATGAT TGAGCTCTTTCTGCCAGCTTG AAA CAAGTTG-CGGAATTAGTTCA TTTTCAATTATTTCA TERM 2573 2633575 - 2633594 + g 81 -2.8 -5.64006 | overlap 2633576 AAGCCTGTTCATAAG TCGCATAA GCCT TTCTGCGG TTTTTTTACTTACCT TERM 2574 2634719 - 2634682 - R 100 -8.5 -6.24157 | opp_overlap 2634682 2634687 2634703, overlap 2634687 ATTTATAAAAAAAAA TAAAAGCGCTTTGAGGC TACC ACCCCAAAACGCCTTTG TTTTGGAGAATGTTT TERM 2575 2634714 - 2634687 - R 100 -10.6 -5.7506 | opp_overlap 2634682 2634687 2634703, overlap 2634682 TAAAAAAAAATAAAA GCGCTTTGAGGC TACC ACCCCAAAACGC CTTTGTTTTGGAGAA Csac_2488 2635775 - 2634786 - | hypothetical protein TERM 2576 2635981 - 2636024 + r 85 -11.2 -3.20361 | gap 1, opp_overlap 2635982, overlap 2635987 CATACAAAAACAAAA ACTAAAGGCGC-TTCGTGTAA CTG TTACACCAAAGCGCCTTTGGA TTAGATTGCAGTTTT TERM 2577 2636023 - 2635982 - R 100 -14.7 -5.71295 | gap 1, opp_overlap 2635981 2635987 ATACAAAAACAAAAA CTAAAGGCGCTTC-GTGTAA CTG TTACACCAAAGCGCCTTTGG ATTAGATTGCAGTTT TERM 2578 2635987 - 2636018 + r 90 -11 -3.78409 | gap 1, opp_overlap 2635982, overlap 2635981 AAAACAAAAACTAAA GGCGC-TTCGTGTAA CTG TTACACCAAAGCGCC TTTGGATTAGATTGC Csac_2489 2637544 - 2636078 - | methyl-accepting chemotaxis sensory transducer TERM 2579 2636241 - 2636259 + g 100 -9 -4.76171 | opp_overlap 2636235 2636239 2636240 GAAACAGCAGAAATG TTTTCAAC ACT GTTGAAAA TTTTATCCTTTTTTG TERM 2580 2636886 - 2636902 + g 79 -8.1 -4.15508 | opp_overlap 2636877, overlap 2636882 GAAGAAGCACCTTCA GCAATTT CTG AAATTGC TTTTGCCACTTCATT Csac_2490 2638168 - 2637575 - | hypothetical protein Csac_2491 2639112 - 2638261 - | binding-protein-dependent transport systems inner membrane component TERM 2581 2638962 - 2638982 + g 72 -4.1 -4.93316 | overlap 2638963 TTAGCGTTATTAGTG ATGAAATAT TAA ATATTTCAC TTTTTGGTCTTATTG Csac_2492 2640405 - 2639122 - | binding-protein-dependent transport systems inner membrane component TERM 2582 2640429 - 2640463 + r 100 -14.5 -3.6914 | opp_overlap 2640426 2640425, overlap 2640430 TCCCCTTTAAACTTT ATTGGCAGGCTTAAA AAGAA TTTAAGCCTGCCAAC TTCTCTATTGAGATT TERM 2583 2640430 - 2640462 + r 100 -18 -2.80761 | opp_overlap 2640426 2640425, overlap 2640429 CCCCTTTAAACTTTA TTGGCAGGCTTAAA AAGAA TTTAAGCCTGCCAA CTTCTCTATTGAGAT Csac_2493 2641761 - 2640484 - | extracellular solute-binding protein TERM 2584 2641845 - 2641824 - R 77 -10.2 -2.62263 | opp_overlap 2641821 2641819 2641818 AGGGGTTTTATATCA TCCCACAC ACAGCA GTGTGGGA CAATACCTTTTTTGG TERM 2585 2641861 - 2641897 + r 100 -13.9 -5.18371 | overlap 2641860 2641862 CAATACCTTTTTTGG GGCTCGGCTCTTTTT GAAGTGG AAAAAGAGCCGAGCA TTTTGTTTTGTCGGG TERM 2586 2641862 - 2641896 + r 100 -17.4 -3.69938 | overlap 2641860 2641861 AATACCTTTTTTGGG GCTCGGCTCTTTTT GAAGTGG AAAAAGAGCCGAGC ATTTTGTTTTGTCGG Csac_2494 2643073 - 2642066 - | alanine racemase Csac_2495 2643534 - 2643292 - | hypothetical protein Csac_2496 2643930 - 2643622 - | hypothetical protein TERM 2587 2644100 - 2644078 - H 88 -8.6 -4.53774 | ACAAACCAATTAAAA CTGTATATAC TGT ATATATACAG TATGCAAAAGGGGAA Csac_2497 2644124 - 2644513 + | regulatory protein GntR, HTH Csac_2498 2644510 - 2645388 + | ABC transporter related Csac_2499 2645357 - 2646034 + | hypothetical protein Csac_2500 2646024 - 2646770 + | hypothetical protein Csac_2501 2646826 - 2647563 + | hypothetical protein Csac_2502 2647638 - 2648363 + | ABC transporter related Csac_2503 2648360 - 2649571 + | ABC-type Na+ efflux pump permease component-like protein TERM 2588 2649715 - 2649699 - T 71 -8.1 -3.27525 | TGTGTGTAAATGGAA CTTTAGT GAA ACTAAAG AATATGAAAATTCTG TERM 2589 2649820 - 2649845 + T 70 -4.1 -5.0809 | overlap 2649824 2649825 ATGCCAAACATGTAT TATTTCTCTTA GCTT TAAGAGGTATA TTTTTATGATTTCTT Csac_2504 2650970 - 2649849 - | monosaccharide-transporting ATPase TERM 2590 2650394 - 2650413 + g 81 -3.6 -5.57729 | CTTCAAGCCCTATAG GTAAAACT TCTA AGTTGTAC TTTTTTCTCTTATTT Csac_2505 2652490 - 2650973 - | xylose transporter ATP-binding subunit TERM 2591 2652559 - 2652525 - R 100 -11.5 -4.21922 | CCATTCAAAATTAAA TTCTGAGAAGGGGCA CACAC CACCCCTCCCCAGAA AATCAGCCAGGTTTT Csac_2506 2653647 - 2652592 - | D-xylose ABC transporter, periplasmic substrate-binding protein TERM 2592 2653051 - 2653068 + g 72 -8.5 -3.6106 | ATCTTTTACTGGCTG GTCAAAG AGAA CTTTGAC TTTCCCACTCTTAAC TERM 2593 2653805 - 2653776 - H 100 -13.9 -3.32997 | opp_overlap 2653781 GTCTTATAAAGTGAA TAGTACTTTTTTG AAAT CAAAAAAGTACTA TAGGTAAGTTGCAAA Csac_2507 2653862 - 2654836 + | hypothetical protein TERM 2594 2654864 - 2654882 + G 77 -3 -5.59962 | overlap 2654866 GAAATTTTTTTCTGT CCAGAGCA AAC TGCTCGCG TTTTTCTTTATTTTA TERM 2595 2655328 - 2655318 - g 74 -4 -5.10461 | TTCAGTGAACAAAAA GTAA AAT TTAC CATGCAGATTCACAC TERM 2596 2655664 - 2655652 - g 76 -2 -5.4505 | TTGCTCAACAAAAAA TTGA GGCAA TCAA ATACAAGCAAGCTCT Csac_2508 2654847 - 2656334 + | signal transduction histidine kinase, LytS TERM 2597 2656415 - 2656405 - g 70 -6.8 -4.17762 | CATTCTTGAAAACAA CCTC AAA GAGG AAAATATAGAAATTA TERM 2598 2657505 - 2657519 + G 78 -6.4 -4.59773 | opp_overlap 2657499 2657505 TTGAAACATCTAAAA GGGCAA TAC TTGCTC TTTTTGGCAATGCAA Csac_2509 2656331 - 2657887 + | response regulator receiver protein TERM 2599 2658657 - 2658632 - g 74 -4.1 -5.16132 | gap 1, overlap 2658635 TAGACCAAAACAAAA GAATTGATGCTA TAT TAGCATCAAA-C GATTCTCTTGCTGAA TERM 2600 2658655 - 2658635 - g 95 -11.3 -4.64486 | overlap 2658632 ACCAAAACAAAAGAA TTGATGCTA TAT TAGCATCAA ACGATTCTCTTGCTG Csac_2510 2657911 - 2658930 + | monosaccharide-transporting ATPase Csac_2511 2660695 - 2658992 - | transposase, IS4 family protein Csac_2512 2661095 - 2661835 + | hypothetical protein TERM 2601 2661870 - 2661850 - T 80 -7.5 -4.32649 | opp_overlap 2661850 ATTCTAAAAATTAAA GGTGGGCTT TCA ACACCCACC CTTTTTATTCAATTA Csac_2513 2663225 - 2661888 - | glucosylceramidase TERM 2602 2663192 - 2663212 + g 79 -3.4 -5.42862 | gap 1 TGAAAGTGCCTTGCT TTGC-TGTT ATGT AACATGCAA TTTTTTTGAACATCT Csac_2514 2664221 - 2663379 - | binding-protein-dependent transport systems inner membrane component TERM 2603 2663762 - 2663750 - G 73 -9.1 -3.44284 | overlap 2663748 CCGTCATCAAGAATA CTGCC TGT GGCAG CGAAAATGCAACGTA Csac_2515 2665130 - 2664243 - | binding-protein-dependent transport systems inner membrane component TERM 2604 2665198 - 2665154 - R 93 -9.4 -4.63218 | opp_overlap 2665149 2665149 2665155 2665156, overlap 2665155 2665156 TCCTTGTGAATAAAA TTCCTGCTCCCAAGACATTC TTTTT AAATATCTTGGGAGCAGATG ATTTAATTTTTAGAA TERM 2605 2665197 - 2665155 - R 100 -12.9 -3.3761 | opp_overlap 2665149 2665149 2665155 2665156, overlap 2665154 2665156 CCTTGTGAATAAAAT TCCTGCTCCCAAGACATTC TTTTT AAATATCTTGGGAGCAGAT GATTTAATTTTTAGA TERM 2606 2665196 - 2665156 - R 100 -16.4 -2.62244 | opp_overlap 2665155 2665149 2665149 2665156, overlap 2665155 2665154 CTTGTGAATAAAATT CCTGCTCCCAAGACATTC TTTTT AAATATCTTGGGAGCAGA TGATTTAATTTTTAG TERM 2607 2665156 - 2665196 + r 87 -11.3 -3.14257 | opp_overlap 2665156 2665155 2665154, overlap 2665155 2665149 2665149 CTTGTGAATAAAATT CCTGCTCCCAAGACATT CTTTTTA AATATCTTGGGAGCAGA TGATTTAATTTTTAG Csac_2516 2666536 - 2665214 - | extracellular solute-binding protein Csac_2517 2666864 - 2668654 + | integral membrane sensor signal transduction histidine kinase Csac_2518 2668691 - 2670280 + | response regulator receiver protein TERM 2608 2670313 - 2670285 - T 84 -5.3 -5.51046 | gap 1, overlap 2670304 CAAACATATAAAAAA GCGG-GTGGG AGAGTACAGA CCCACACCGC GGGGTGTTAGAATAC Csac_2519 2672235 - 2670349 - | coagulation factor 5/8 type domain-containing protein TERM 2609 2671094 - 2671084 - G 77 -2.6 -5.45652 | ACCTTGAACAAAAAA TTTT GAG AAAA GTGACACTGGATAGA Csac_2520 2673097 - 2672882 - | hypothetical protein TERM 2610 2673783 - 2673769 - g 74 -2.8 -5.2696 | TTAAAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 2611 2674320 - 2674305 - g 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_2521 2673184 - 2674413 + | transposase, mutator type Csac_2522 2674671 - 2674366 - | hypothetical protein Csac_2523 2675303 - 2676283 + | transposase, IS111A/IS1328/IS1533 Csac_2525 2677263 - 2676718 - | methyl-accepting chemotaxis sensory transducer TERM 2612 2678070 - 2678098 + r 100 -7.5 -5.95286 | overlap 2678072 2678073 TAAAGTAGTTTCCAT TCTTTCTTCCCAA TCA TTGGGAAGAATAA TTTTTTATTTTTGCT TERM 2613 2678072 - 2678097 + r 82 -8.5 -4.13511 | gap 1, overlap 2678070 2678073 AAGTAGTTTCCATTC T-TTCTTCCCAA TCA TTGGGAAGAATA ATTTTTTATTTTTGC TERM 2614 2678073 - 2678095 + r 100 -13.6 -3.6144 | overlap 2678072 2678070 AGTAGTTTCCATTCT TTCTTCCCAA TCA TTGGGAAGAA TAATTTTTTATTTTT Csac_2527 2679914 - 2678913 - | glycosidase, PH1107-related TERM 2615 2679221 - 2679241 + g 74 -2.5 -5.29846 | overlap 2679226 CTTCTTCTGTTTTTA TTGGCGG AGTACTA CCTCCAA TTTTTGTTTCCCATT Csac_2528 2681774 - 2679939 - | hypothetical protein TERM 2616 2681830 - 2681861 + r 85 -6.6 -5.04377 | gap 1, opp_overlap 2681830 2681827 2681839, overlap 2681830 2681831 AAGGTGATAATATCA GT-CAGGGAAGGGCT CTT AACCCTTCCCTCAAC TTTGTTTTCTTTTAA TERM 2617 2681861 - 2681830 - R 83 -11 -2.80817 | gap 1, opp_overlap 2681830 2681830 2681831, overlap 2681827 2681839 AAGGTGATAATATCA GTC-AGGGAAGGGCT CTT AACCCTTCCCTCAAC TTTGTTTTCTTTTAA TERM 2618 2681831 - 2681859 + r 80 -10.3 -2.73671 | opp_overlap 2681830 2681827 2681839, overlap 2681830 2681830 AGGTGATAATATCAG TCAGGGAAGGGCT CTT AACCCTTCCCTCA ACTTTGTTTTCTTTT Csac_2529 2683417 - 2681873 - | extracellular solute-binding protein TERM 2619 2683458 - 2683482 + r 87 -11.6 -3.10715 | opp_overlap 2683456 2683454 TTTTATATATACATT TTAGAGGGAT ATAAA ATCCCTCTAA TTGCCTCATACTAAC Csac_2530 2684368 - 2683493 - | binding-protein-dependent transport systems inner membrane component Csac_2531 2685363 - 2684407 - | binding-protein-dependent transport systems inner membrane component Csac_2532 2685571 - 2687001 + | response regulator receiver protein Csac_2533 2687004 - 2688857 + | integral membrane sensor signal transduction histidine kinase Csac_2535 2690303 - 2689785 - | hypothetical protein Csac_2536 2691408 - 2690287 - | helix-turn-helix domain-containing protein Csac_2538 2693031 - 2691889 - | N-acetylglucosamine-6-phosphate deacetylase Csac_2539 2694700 - 2693057 - | glycoside hydrolase family protein TERM 2620 2693588 - 2693606 + g 76 -2.4 -5.5208 | TTGAATGCCTTTTTC CTTTGCTG CAT CAATAAAG TTTTTTATGTTCTCA Csac_2540 2695709 - 2694741 - | GCN5-related N-acetyltransferase TERM 2621 2695660 - 2695670 + g 73 -5.4 -4.6902 | opp_overlap 2695660 AAAATGCTCGCACAA TGGT AAA ACCA TTTTTCAAGTTCTGG Csac_2541 2697108 - 2696167 - | hypothetical protein Csac_2542 2697980 - 2697132 - | binding-protein-dependent transport systems inner membrane component Csac_2543 2698880 - 2698002 - | binding-protein-dependent transport systems inner membrane component TERM 2622 2698913 - 2698967 + r 100 -12.4 -4.59882 | opp_overlap 2698917 2698918, overlap 2698917 2698918 2698920 TTTTCAAAAATTTTC TAAATTGTATTTTGAGCCGAAGAGAA GTA TTCTCTTCGGCTCAGTACAAATTTTA TTCTTTATTTTTTCA TERM 2623 2698917 - 2698961 + r 100 -14 -3.62799 | gap 2, opp_overlap 2698917 2698918, overlap 2698913 2698918 2698920 CAAAAATTTTCTAAA TTGTATTTTGAGCCGAAGAGAA GTA TTCTCTTCGGCTCAG--TACAA ATTTTATTCTTTATT TERM 2624 2698961 - 2698917 - R 95 -11.8 -3.61889 | gap 2, opp_overlap 2698917 2698913 2698918 2698920, overlap 2698918 CAAAAATTTTCTAAA TTGTATTTTGAGCCGAAGAGAA GTA TTCTCTTCGGCTCAG--TACAA ATTTTATTCTTTATT TERM 2625 2698962 - 2698918 - R 89 -12.3 -2.7641 | opp_overlap 2698917 2698913 2698918 2698920, overlap 2698917 AAAAATTTTCTAAAT TGTATTTTGAGCCGAAGAGAA GTA TTCTCTTCGGCTCAGTACAAA TTTTATTCTTTATTT TERM 2626 2698918 - 2698962 + r 100 -12.3 -5.10765 | opp_overlap 2698917 2698918, overlap 2698917 2698913 2698920 AAAAATTTTCTAAAT TGTATTTTGAGCCGAAGAGAA GTA TTCTCTTCGGCTCAGTACAAA TTTTATTCTTTATTT TERM 2627 2698920 - 2698960 + r 100 -14.9 -2.75239 | opp_overlap 2698917 2698918, overlap 2698917 2698918 2698913 AAATTTTCTAAATTG TATTTTGAGCCGAAGAGAA GTA TTCTCTTCGGCTCAGTACA AATTTTATTCTTTAT Csac_2544 2700279 - 2698972 - | extracellular solute-binding protein Csac_2545 2701125 - 2700370 - | response regulator receiver protein Csac_2546 2702872 - 2701118 - | signal transduction histidine kinase, LytS TERM 2628 2702944 - 2702907 - R 100 -10.8 -4.88228 | AGTTAATATTAAAAA GACTACACTCCTTT GCTATCTTTT AAAGGAGTGTAGCC TTACCATTTAAAGTA Csac_2547 2706288 - 2702962 - | hypothetical protein TERM 2629 2704786 - 2704806 + g 75 -7 -4.20042 | overlap 2704781 GAGATAATCCTTTTC GAAAAACT TTTTT AGTTTTTC TTTTCCCGTGTTGAT TERM 2630 2706308 - 2706270 - G 72 -8.2 -3.61219 | overlap 2706272 2706274 ACAAAATTTTTGAAA TATAGGGTTGCAAGACCA ATT TAATCTTGCAACCCCCTT CAAATACTTATTACA TERM 2631 2706306 - 2706272 - G 82 -10.8 -3.37685 | overlap 2706270 2706274 AAAATTTTTGAAATA TAGGGTTGCAAGACCA ATT TAATCTTGCAACCCCC TTCAAATACTTATTA TERM 2632 2706304 - 2706274 - G 100 -15.6 -3.24976 | overlap 2706272 2706270 AATTTTTGAAATATA GGGTTGCAAGACCA ATT TAATCTTGCAACCC CCTTCAAATACTTAT Csac_2548 2709707 - 2706339 - | carbohydrate-binding CenC domain-containing protein Csac_2549 2711575 - 2709995 - | S-layer domain-containing protein Csac_2550 2713282 - 2711732 - | response regulator receiver protein TERM 2633 2712469 - 2712459 - G 73 -5.4 -4.63218 | opp_overlap 2712445 2712459 2712457, overlap 2712439 2712434 TTGCTTGCAACAAAA GCAT ATA ATGC TGTCTTTTTTGATCT Csac_2551 2715152 - 2713308 - | integral membrane sensor signal transduction histidine kinase TERM 2634 2714451 - 2714475 + g 90 -10.9 -4.32857 | AACAATCTCGCCATC TTTTGTTATGG CAA CCATAACAGAA TTTCTATTTGAACGC TERM 2635 2715263 - 2715237 - R 100 -13.8 -4.15565 | TTCATTATTTGAAAA GGGCTGATGG CACCTCT CCATCAGCCC CAAAAAATCTGTGTG Csac_2552 2716899 - 2715292 - | extracellular solute-binding protein TERM 2636 2716523 - 2716491 - G 84 -11.5 -3.14132 | opp_overlap 2716491 2716491 2716498 2716501, overlap 2716498 2716501 TTTGCTTGTTAGCAA CTGTAAAGAAGTATG GGT CATACTTCTTTGCAA GTTCATCTAATGCAT TERM 2637 2716491 - 2716524 + g 82 -11.3 -3.29947 | gap 1, opp_overlap 2716491 2716498 2716501, overlap 2716491 2716498 2716501 TTTGCTTGTTAGCAA C-TGTAAAGAAGTATG GGT CATACTTCTTTGCAAG TTCATCTAATGCATA TERM 2638 2716491 - 2716523 + g 80 -11.5 -2.57647 | opp_overlap 2716491 2716498 2716501, overlap 2716491 2716498 2716501 TTTGCTTGTTAGCAA CTGTAAAGAAGTATG GGT CATACTTCTTTGCAA GTTCATCTAATGCAT TERM 2639 2716498 - 2716516 + g 82 -10.4 -3.62032 | opp_overlap 2716491 2716498 2716501, overlap 2716491 2716491 2716501 GTTAGCAACTGTAAA GAAGTATG GGT CATACTTC TTTGCAAGTTCATCT TERM 2640 2716516 - 2716498 - G 86 -10.4 -3.67976 | opp_overlap 2716498 2716491 2716491 2716501, overlap 2716491 2716501 GTTAGCAACTGTAAA GAAGTATG GGT CATACTTC TTTGCAAGTTCATCT Csac_2553 2717869 - 2716985 - | binding-protein-dependent transport systems inner membrane component Csac_2554 2718861 - 2717905 - | binding-protein-dependent transport systems inner membrane component TERM 2641 2719034 - 2719057 + r 71 -6.7 -4.08216 | opp_overlap 2719034 ATAAAAAACAAAAAA CCTCTCCAG CTTTAC CTGAAGAGG TTTTGAAGAGACTAC TERM 2642 2719057 - 2719034 - R 100 -8.9 -6.07374 | opp_overlap 2719034 ATAAAAAACAAAAAA CCTCTCCAG CTTTAC CTGAAGAGG TTTTGAAGAGACTAC Csac_2555 2719818 - 2719084 - | hypothetical protein TERM 2643 2719779 - 2719790 + g 70 -3 -5.0925 | opp_overlap 2719779 AAACCGCAAAAACCA CAAT TGCT ATTG TTTTTACTTTTGACC Csac_2556 2721129 - 2719834 - | hypothetical protein TERM 2644 2721092 - 2721066 - G 95 -10.3 -4.70921 | opp_overlap 2721065 TATAATACAAATAAA TGCTGAGTATA ACAAG TATACCCAGCA CTATGCTCTTTATAG Csac_2557 2721633 - 2721145 - | hypothetical protein TERM 2645 2721363 - 2721379 + g 72 -8.1 -3.48985 | CCAAATTATTCTGTC CAAAAGA CTC TCTTTTG TCGTTTTTTGTATAT TERM 2646 2721542 - 2721554 + g 84 -7.7 -4.65895 | GAATCTATATATCTT GCCTT GTG AAGGC TTTTTCCCTCAGCAA Csac_2558 2723434 - 2721737 - | multi-sensor signal transduction histidine kinase Csac_2559 2724172 - 2723480 - | two component transcriptional regulator TERM 2647 2724327 - 2724303 - H 100 -10.2 -5.13521 | opp_overlap 2724318 2724319 AAAGGAGGGAAAAAA GCTCTTAAAA TACAT TTTTAAGAGC TATAAATGCTATGGA TERM 2648 2724318 - 2724365 + H 74 -2.3 -5.66684 | gap 1, opp_overlap 2724303, overlap 2724319 GCTCTTAAAATACAT TTTTAAGAGCTATAAATGCTAT GGAAA ATAGAAATT-TAGCTCTTGAAG TTTTTTTGTGGCTTG Csac_2560 2724338 - 2724832 + | hypothetical protein Csac_2561 2726507 - 2724876 - | CTP synthetase TERM 2649 2725680 - 2725707 + g 73 -7 -4.10161 | opp_overlap 2725680 2725679 2725675 2725696, overlap 2725672 TATCCAATCAGAAAG GTCTGGCTTTGT ACAA GCAAAGCCAAGC TTTTCACAGATAATC Csac_2562 2727376 - 2727161 - | hypothetical protein Csac_2563 2727917 - 2728468 + | appr-1-p processing domain-containing protein Csac_2564 2729057 - 2728539 - | hypothetical protein Csac_2565 2730270 - 2729341 - | NUDIX hydrolase Csac_2566 2731890 - 2730514 - | undecaprenyl-phosphate galactose phosphotransferase Csac_2567 2732713 - 2731940 - | glycosyl transferase family protein Csac_2568 2733834 - 2732710 - | glycosyl transferase, group 1 Csac_2569 2734859 - 2733831 - | glycosyl transferase, group 1 Csac_2570 2736040 - 2734922 - | glycosyl transferase, group 1 Csac_2571 2737290 - 2736043 - | hypothetical protein TERM 2650 2736270 - 2736260 - G 79 -3.2 -5.5353 | CATACTAAGAAAAAA GCAG TTC CTAC CAGACCACAGTATAA TERM 2651 2736634 - 2736624 - G 70 -5.4 -4.46617 | AAAATAAACCTAAAA TCGA ACT TCGA GATATAGTCTTTAAC Csac_2572 2738486 - 2737413 - | glycosyl transferase, group 1 TERM 2652 2737841 - 2737859 + g 80 -2.4 -5.72254 | opp_overlap 2737833 TGTAAAGCTCATAAG CATATGAA AAA TTCTTGTG TTTTTTGTTATTTCC Csac_2573 2740729 - 2738549 - | O-antigen polymerase TERM 2653 2739849 - 2739809 - G 71 -7 -3.93262 | gap 1, overlap 2739839 TTCAACAAAGCTAAA TGCATATGCAG-CTGCC CACACAAC GGCAAACTGCATAAGCA AAATCAGCCAAAGTT TERM 2654 2740695 - 2740712 + g 83 -7.1 -4.77757 | opp_overlap 2740695 TGTGTATCTTTGAAA GAAAAAG TTTG CTTTTTC TTTTCCTTTTTCGCC Csac_2574 2741421 - 2740789 - | Zn-dependent hydrolase of the beta-lactamase fold-like protein Csac_2575 2741592 - 2742173 + | hypothetical protein TERM 2655 2742417 - 2742443 + T 70 -7.2 -3.61244 | opp_overlap 2742420, overlap 2742413 2742419 2742420 AGAGAAGAAAAATAA AAAGGCAGGGAT TCT GTCCCTGCCGTC TTGATTTGTAAAGTG TERM 2656 2742419 - 2742441 + T 80 -9.8 -3.37915 | opp_overlap 2742420, overlap 2742417 2742413 2742420 AGAAGAAAAATAAAA AGGCAGGGAT TCT GTCCCTGCCG TCTTGATTTGTAAAG TERM 2657 2742440 - 2742420 - T 100 -12.6 -5.74684 | opp_overlap 2742420 2742419 2742417 2742413 GAAGAAAAATAAAAA GGCAGGGA TTCTG TCCCTGCC GTCTTGATTTGTAAA TERM 2658 2742420 - 2742440 + T 100 -13.3 -2.62267 | opp_overlap 2742420, overlap 2742419 2742417 2742413 GAAGAAAAATAAAAA GGCAGGGAT TCT GTCCCTGCC GTCTTGATTTGTAAA Csac_2576 2744626 - 2742830 - | ABC transporter related TERM 2659 2743651 - 2743639 - G 88 -7.7 -4.7416 | overlap 2743631 TCAAAATCTCAAAAA TCCTC TCT GAGGA GCTGCTTGCAACAAG TERM 2660 2744614 - 2744625 + g 80 -5.8 -5.00616 | TTGGCATTTTTACAT TGGC TTGT GCCA TTTTTTAAAAACCCC Csac_2577 2746443 - 2744806 - | ABC transporter, transmembrane region Csac_2578 2747910 - 2746627 - | adenylosuccinate synthase Csac_2579 2748090 - 2748737 + | putative proton-coupled thiamine transporter YuaJ Csac_2580 2749722 - 2748955 - | hypothetical protein Csac_2581 2750777 - 2750202 - | hypothetical protein Csac_2582 2751335 - 2750802 - | helicase domain-containing protein TERM 2661 2750876 - 2750888 + g 79 -3.4 -5.58179 | CTGAAGAAACCACTT GATC AAAAA GATC TTTTTTCTTCTGCTG TERM 2662 2751473 - 2751510 + r 80 -7.3 -4.63932 | opp_overlap 2751480 GATACAGCTTGTAGG TTATGAATAGTGTTTAA AGTA TTAAAAACTATTCAAAA TTTTATTAAACACTA Csac_2584 2753320 - 2752685 - | resolvase domain-containing protein TERM 2663 2752742 - 2752755 + g 78 -3.9 -5.30575 | AAACACCTCGCTTTC TAAGA GTTT TCTTA TTTTTTGAATTTTTC Csac_2585 2754596 - 2753424 - | non-specific serine/threonine protein kinase TERM 2664 2754453 - 2754439 - G 85 -10 -3.90744 | opp_overlap 2754438 2754437 2754448, overlap 2754443 TTCTCTTCTAAAGAA GCCAGA ACG TCTGGC ACTTCATCCTGTGGA Csac_2586 2756157 - 2754709 - | hypothetical protein TERM 2665 2755608 - 2755619 + g 73 -2.2 -5.28983 | GTCTTGTCATTGCAT GTGC ATAA GTAC TTTTTATCTTTTCAA TERM 2666 2756203 - 2756187 - R 100 -5.8 -6.23317 | ATAAAAACAAAAAAA GCAGGC TTTTT ACCTGC TTGCACCGCCACCGC Csac_2587 2757125 - 2756196 - | hypothetical protein Csac_2588 2757376 - 2757852 + | PilT domain-containing protein Csac_2589 2758947 - 2758081 - | hypothetical protein Csac_2590 2759533 - 2758964 - | LemA family protein Csac_2591 2759716 - 2760384 + | hypothetical protein TERM 2667 2761261 - 2761237 - g 91 -6.6 -5.28176 | gap 1, opp_overlap 2761242, overlap 2761242 GTGATTGACAAAAAA TCAA-ACAAGG TGGG CCTTGTTTTGA GAGGTCAAGGAAAAT TERM 2668 2761242 - 2761255 + G 70 -6.7 -4.09685 | opp_overlap 2761237 2761242 TGACAAAAAATCAAA CAAGG TGGG CCTTG TTTTGAGAGGTCAAG TERM 2669 2761255 - 2761242 - g 76 -6.7 -4.47686 | opp_overlap 2761242, overlap 2761237 TGACAAAAAATCAAA CAAGG TGGG CCTTG TTTTGAGAGGTCAAG Csac_2592 2760532 - 2761278 + | hypothetical protein TERM 2670 2761587 - 2761600 + GF 75 -5.3 -4.79667 | TGCAGCGTCTCCTAA TTGGT TAAA ACCAA TTTTTGATAACTTTT TERM 2671 2761830 - 2761842 + GF 73 -3.3 -5.13722 | TGGTCTCAAATGTCG CGTTC TTG GTACG TTTTATTTTGATGAA TERM 2672 2762812 - 2762802 - gf 76 -3.2 -5.33405 | TGCAGTAAAGAAAAA CTCC CAA GGAA GACCAATAGCAGGTT Csac_2593 2761378 - 2763423 + | hypothetical protein Csac_2594 2763350 - 2764804 + | hypothetical protein TERM 2673 2764825 - 2764847 + T 89 -10.6 -3.84061 | overlap 2764823 AAAATAATATTTTCC GTCCCTTCAA TTC TAGAAGGGAC TATTATTTTGTTGTA Csac_2595 2765663 - 2764806 - | D12 class N6 adenine-specific DNA methyltransferase TERM 2674 2765826 - 2765794 - R 100 -15 -4.06527 | gap 1, opp_overlap 2765791 AAAATTAAAACAGAA GAGGAGAGTGCAGCC TTTA GGC-ACACTCTCCTC GAGCTTTTGCAAGCA Csac_2596 2766931 - 2765810 - | hypothetical protein Csac_2597 2767513 - 2767022 - | DNA repair protein RadC TERM 2675 2767549 - 2767581 + r 100 -7 -5.88061 | gap 1, opp_overlap 2767556, overlap 2767549 2767551 TTTACTCCGAAAGGA G-AGGGAAGAGAAGG ATAC CCTTCTCAACCCTGC TTTTTTTACTTTTTT TERM 2676 2767549 - 2767580 + r 74 -7.2 -4.07346 | opp_overlap 2767556, overlap 2767549 2767551 TTTACTCCGAAAGGA GAGGGAAGAGAAGG ATAC CCTTCTCAACCCTG CTTTTTTTACTTTTT TERM 2677 2767551 - 2767578 + r 82 -9.8 -3.57012 | opp_overlap 2767556, overlap 2767549 2767549 TACTCCGAAAGGAGA GGGAAGAGAAGG ATAC CCTTCTCAACCC TGCTTTTTTTACTTT TERM 2678 2767573 - 2767556 - R 81 -9.9 -3.17725 | opp_overlap 2767551 2767549 2767549 CGAAAGGAGAGGGAA GAGAAGG ATAC CCTTCTC AACCCTGCTTTTTTT Csac_2598 2768192 - 2767587 - | hypothetical protein TERM 2679 2768811 - 2768797 - g 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 2680 2769348 - 2769333 - g 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_2599 2768212 - 2769441 + | transposase, mutator type Csac_2600 2769876 - 2769394 - | hypothetical protein Csac_2601 2770169 - 2769939 - | hypothetical protein TERM 2681 2770303 - 2770331 + r 100 -17.7 -5.95539 | opp_overlap 2770306 GCAGGCGTTGAGCAG GAAGTGGTAAAGT TTT ACTTTACCACTTC TTTTTTTATTTGAAC TERM 2682 2770328 - 2770306 - R 100 -13.6 -3.21099 | opp_overlap 2770303 GGCGTTGAGCAGGAA GTGGTAAAGT TTT ACTTTACCAC TTCTTTTTTTATTTG Csac_2602 2771609 - 2770599 - | phage recombination protein Bet TERM 2683 2771575 - 2771587 + g 72 -4.1 -4.93898 | GTGTAAACTACCTCA GGAAT ATC GTTCC TTTTTATAATACTCT Csac_2603 2771948 - 2771676 - | hypothetical protein TERM 2684 2772338 - 2772299 - R 90 -8.1 -4.76802 | gap 2, opp_overlap 2772299 TTGAAAAACAAGAAA GCCACAGAGATAATTTGCA TTGC CGCAAACT--CTCTGTGGC TTTACTCTCTTTTGA Csac_2604 2772925 - 2772434 - | hypothetical protein Csac_2605 2773110 - 2774069 + | transposase, putative Csac_2606 2774895 - 2774104 - | IstB ATP binding domain-containing protein TERM 2685 2775653 - 2775639 - g 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 2686 2776190 - 2776175 - g 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGGG GCAAG TGGAAAAACGGAGTA Csac_2607 2775054 - 2776283 + | transposase, mutator type Csac_2609 2776656 - 2778053 + | integrase catalytic subunit Csac_2610 2779290 - 2778061 - | transposase, mutator type TERM 2687 2778154 - 2778169 + g 74 -4.7 -4.84918 | TACTCCGTTTTTCCA CTTGC CCCGAC GCAAG TTTTCTCTTTGTAAA TERM 2688 2778691 - 2778705 + g 70 -2.8 -5.1925 | GCCGAAGAAAGTGTA GATACC GAA GATATC TTTTTTGCCTTCTAA TERM 2689 2779648 - 2779660 + G 73 -5.5 -4.54727 | opp_overlap 2779641 TTGAGAGACCTCTCT GTCCT GAA AGGGC TTTTGATTTCAGGGC Csac_2611 2779396 - 2779695 + | hypothetical protein TERM 2690 2779730 - 2779740 + F 71 -6.8 -4.14013 | overlap 2779733 TTCTTGGGACAGGGG CTGC TGT GCAG TTTTGCACAGTTTTG TERM 2691 2779733 - 2779750 + F 93 -9.9 -4.63218 | overlap 2779730 TTGGGACAGGGGCTG CTGTGCA GTTT TGCACAG TTTTGTTGACCAGGA Csac_2612 2779771 - 2780613 + | hypothetical protein TERM 2692 2780629 - 2780611 - T 77 -3.1 -5.54192 | AGTAAGGCAAAAAAA TAGAGCC CCACC GCCTCTA CAAATTCCTTCCAGG Csac_2613 2781511 - 2780747 - | radical SAM domain-containing protein Csac_2614 2782389 - 2781529 - | phage integrase family protein Csac_2615 2782614 - 2782405 - | hypothetical protein TERM 2693 2782817 - 2782799 - R 91 -5.3 -5.83211 | gap 1, opp_overlap 2782800 2782802, overlap 2782800 GATGAAAAGAAAAAA GGACAGGT ATAA ACCTG-CC TTTTACTTTTATTTT TERM 2694 2782800 - 2782817 + r 74 -5.5 -4.83677 | opp_overlap 2782799 2782800, overlap 2782802 ATGAAAAGAAAAAAG GACAGGT ATAA ACCTGCC TTTTACTTTTATTTT TERM 2695 2782817 - 2782800 - R 77 -7.7 -4.07486 | opp_overlap 2782800 2782802, overlap 2782799 ATGAAAAGAAAAAAG GACAGGT ATAA ACCTGCC TTTTACTTTTATTTT Csac_2616 2783575 - 2782826 - | hypothetical protein TERM 2696 2783194 - 2783210 + g 74 -3.8 -5.09225 | TGGCTGTTTCCTGCT TGAAAT CTGCA ATTTCA TTTTTTAAATCAGCT Csac_2617 2783996 - 2783658 - | transcriptional modulator of MazE/toxin, MazF TERM 2697 2783920 - 2783934 + g 75 -9.2 -3.22516 | overlap 2783918 GAGATTATCACTGCT GGGCGG ATA CCGCTC TGTTCATGTCCTCTT Csac_2618 2784244 - 2783993 - | hypothetical protein TERM 2698 2784312 - 2784322 + r 81 -4 -5.63857 | opp_overlap 2784312 TTGGGTTTCTGCAAA CAAA ATT TTTG TTTTTTTAGCTTTTT Csac_2619 2785173 - 2784328 - | hypothetical protein TERM 2699 2784883 - 2784873 - G 74 -4 -5.10461 | opp_overlap 2784873 GTGAGTTAAGAAAAA TACA AAT TGTA TCATCTTCTTTTCCT Csac_2620 2785391 - 2785191 - | LexA family transcriptional regulator Csac_2621 2785678 - 2785385 - | hypothetical protein Csac_2622 2787879 - 2785696 - | peptidase M23B TERM 2700 2786093 - 2786111 + g 72 -3.8 -5.03145 | TATTTATCATCTACT GGCATGTA CTC TGGATGCC TTTTTTCAAAGCTTC TERM 2701 2786442 - 2786458 + g 80 -6.5 -4.78121 | overlap 2786443 GCACCTGCATAAGTC CGATGGC ATA GCCATCC TTGTTTTTTGCTTTT TERM 2702 2786443 - 2786457 + g 78 -10 -3.43212 | overlap 2786442 CACCTGCATAAGTCC GATGGC ATA GCCATC CTTGTTTTTTGCTTT TERM 2703 2786610 - 2786632 + g 73 -3.4 -5.11836 | opp_overlap 2786613, overlap 2786613 GTGAGCTTGCTGATA CAACTTTGGG CGT TTCAAAGATG TTTTCTTTTACATCT TERM 2704 2786969 - 2786987 + g 70 -3.2 -4.95843 | TCAACTTTTTCTGCA TTGTCA AGATTGC TGACAA TTTTATATTTTGTCT Csac_2623 2788459 - 2787881 - | metal dependent phosphohydrolase TERM 2705 2788483 - 2788465 - R 100 -11 -5.95539 | opp_overlap 2788468, overlap 2788479 GCTTAAACAAAAAAA GCAGGGCT TTA AACCCTGC TTCAGAACGGCAATT Csac_2624 2788910 - 2788485 - | single-strand binding protein/primosomal replication protein n TERM 2706 2788622 - 2788643 + g 71 -4.3 -4.89054 | overlap 2788615 2788615 2788624 CTACTGCTGGTGCCT CTGCAGCCT GTTC ATGCTGCTG TTCTTTTTTTGTCCC Csac_2625 2789590 - 2788931 - | SAF domain-containing protein TERM 2707 2789604 - 2789620 + r 74 -2.9 -5.37043 | ACCTCCTTGTCTAAT CCTGTGC AAA GTATGGG TTTTTTATATAGAAT Csac_2626 2790234 - 2789599 - | hypothetical protein Csac_2627 2792141 - 2790327 - | hypothetical protein TERM 2708 2791449 - 2791468 + g 76 -9.4 -3.39449 | AGAAGTAGTTACTCT CTCTGATA TACA TATCAGAG TTCCTGTTGGTGCCC TERM 2709 2792194 - 2792175 - R 100 -9.3 -5.60689 | GCATACAACAAAAAA GGGTGCT TTATAT AGCACCC CGCCTATTTAATTAA Csac_2628 2792865 - 2792422 - | peptidase A24A, prepilin type IV Csac_2629 2793335 - 2792862 - | hypothetical protein Csac_2630 2793777 - 2793352 - | hypothetical protein TERM 2710 2793834 - 2793802 - R 95 -9.1 -5.24531 | opp_overlap 2793798 2793806 2793833, overlap 2793806 ACCTCCCAGAAAAAA GAAAGGCAGGGTGTT AGA AGCACCCTGCCTTAT TGAATTTGATTCAAG TERM 2711 2793806 - 2793830 + r 100 -16.5 -3.79506 | opp_overlap 2793802 2793806, overlap 2793798 CCCAGAAAAAAGAAA GGCAGGGTGTT AGA AGCACCCTGCC TTATTGAATTTGATT TERM 2712 2793830 - 2793806 - R 100 -14.3 -5.13354 | opp_overlap 2793806 2793798, overlap 2793802 CCCAGAAAAAAGAAA GGCAGGGTGTT AGA AGCACCCTGCC TTATTGAATTTGATT Csac_2631 2794997 - 2794275 - | glycosyl transferase family protein Csac_2632 2795548 - 2794994 - | methyltransferase type 11 TERM 2713 2795770 - 2795749 - R 95 -4.4 -6.28401 | opp_overlap 2795745 2795749, overlap 2795741 GAAAAAATAAAAAAA GCAGGG CTTTATTTGT CCCTGC TTTATTCTGGCACCT Csac_2633 2797172 - 2795772 - | hypothetical protein TERM 2714 2796343 - 2796331 - G 76 -3.4 -5.27779 | CCTAATATGAAAAAA GGAA GTGTA TTCC ACAAGTTTTGCTCTC Csac_2634 2797948 - 2797187 - | hypothetical protein TERM 2715 2797986 - 2798021 + r 100 -11.4 -5.55695 | gap 1, opp_overlap 2797991 TCTTCTAAAAAAAAT AAAAACCACAG-ACCTA TTA TAGGTACTGTGGTTTTA TTTTTTATATTCTTG TERM 2716 2798016 - 2797991 - R 100 -11.3 -5.94743 | gap 1, opp_overlap 2797986 TAAAAAAAATAAAAA CCACAG-ACCTA TTA TAGGTACTGTGG TTTTATTTTTTATAT Csac_2635 2798860 - 2798111 - | hypothetical protein Csac_2636 2799968 - 2798841 - | type II secretion system protein E Csac_2637 2801254 - 2799965 - | hypothetical protein TERM 2717 2801315 - 2801278 - R 100 -12.7 -5.40474 | opp_overlap 2801282, overlap 2801282 2801301 ACCTCCCTAAAAAAA TAAAGCCTCTGGTGGGC AATA ACCCTCCAGAGGCTTCC TATACAGGTTAGTTC TERM 2718 2801282 - 2801311 + r 100 -15 -3.26947 | opp_overlap 2801278 2801282 2801301 CCCTAAAAAAATAAA GCCTCTGGTGGG CAATAA CCCTCCAGAGGC TTCCTATACAGGTTA TERM 2719 2801311 - 2801282 - R 100 -15.7 -5.20328 | opp_overlap 2801282, overlap 2801278 2801301 CCCTAAAAAAATAAA GCCTCTGGTGGGC AATA ACCCTCCAGAGGC TTCCTATACAGGTTA Csac_2638 2807848 - 2801324 - | PKD domain-containing protein TERM 2720 2807831 - 2807815 - G 86 -6.6 -5.16969 | opp_overlap 2807815 2807814 2807817 TACATAAAAAAGAAA GAGCTT TTAAC AAGCTC CTGTGTTTAAATAAC Csac_2639 2809742 - 2807868 - | hypothetical protein TERM 2721 2809756 - 2809766 + r 70 -4 -4.99638 | ATGCTCTATCAACTC CTTT ACC AAAG TTTTTCTCTCACTAT Csac_2640 2810378 - 2809830 - | hypothetical protein TERM 2722 2809921 - 2809933 + gr 73 -7.7 -3.72405 | ATTAGAATCTGCTGT CCTTC TTG GAAGG TTATAATTTTCTGAA Csac_2641 2811123 - 2810350 - | hypothetical protein Csac_2642 2811488 - 2811120 - | XRE family transcriptional regulator TERM 2723 2811613 - 2811577 - R 80 -7.4 -4.55887 | gap 1, opp_overlap 2811577 2811573 TTTTAAAAACAGAAA GCCACGG-CAAGGTT TTGACTGC AACCTTTTCCGTGGC TAACTTCCCTTTTGA TERM 2724 2811995 - 2812019 + r 81 -4.2 -5.63236 | opp_overlap 2811998, overlap 2811996 2811998 ACCCCTGAAAAACAA AAACCACAGC CTTTT GCTGTGGTAG TTTTTATTTTTACAT TERM 2725 2811996 - 2812018 + r 74 -7.7 -3.95502 | opp_overlap 2811998, overlap 2811995 2811998 CCCCTGAAAAACAAA AACCACAGC CTTTT GCTGTGGTA GTTTTTATTTTTACA TERM 2726 2812016 - 2811998 - R 100 -10.3 -5.61881 | opp_overlap 2811996 2811995 2811998 CCTGAAAAACAAAAA CCACAGC CTTTT GCTGTGG TAGTTTTTATTTTTA TERM 2727 2811998 - 2812016 + r 85 -10.3 -3.53667 | opp_overlap 2811998, overlap 2811996 2811995 CCTGAAAAACAAAAA CCACAGC CTTTT GCTGTGG TAGTTTTTATTTTTA TERM 2728 2812148 - 2812130 - R 74 -3.1 -5.40474 | opp_overlap 2812142, overlap 2812142 ATCCCTGGAAAAAAA CAAAGCC ACTAA GGCTTTC TCAAGCCTTTACCTC Csac_2643 2812835 - 2812359 - | hypothetical protein TERM 2729 2813221 - 2813233 + r 74 -6.2 -4.43911 | TGCAGCACACCTCAT GCCC TGCCC GGGC TTTTGATTCGGCTTT Csac_2644 2813681 - 2813382 - | hypothetical protein TERM 2730 2813769 - 2813787 + H 83 -6.7 -4.76123 | opp_overlap 2813769, overlap 2813764 TCTGCTATTGAAAAA GCCTTGA AAAAA TCAGGGC TTTTGTTACTGCTTT TERM 2731 2814053 - 2814040 - g 72 -3.9 -5.02074 | TGAGGTGGCAAAAAA GAAAA AGAA TTTTC TGGTCATTAAGAACA Csac_2645 2813912 - 2814274 + | prevent-host-death family protein TERM 2732 2814311 - 2814289 - g 74 -7.8 -3.91716 | overlap 2814277 GGATGTGGCAAATAA CTTTTCTGCC AGA AGCAAAAAAG GAACTTTTTAAACTT TERM 2733 2814404 - 2814380 - g 100 -9.3 -4.74801 | GAAGGTTAGCAAAAA TCCACTTCCAC AAA GTGAAGGTGGA TACGGCAAACCACTT Csac_2646 2814276 - 2814632 + | plasmid stabilization system protein TERM 2734 2814626 - 2814616 - T 77 -4 -5.47821 | opp_overlap 2814616 ATGTATTTAAAAAAA GTTT CGA AAAC TTATAAGACCAGGAC TERM 2735 2814669 - 2814635 - T 74 -8.6 -3.32984 | opp_overlap 2814630 2814636, overlap 2814633 2814636 2814638 CGAAAACTTATAAGA CCAGGACTCTGGGA ATGATTA TACCAGAGTCCTGT TATATTTTATTGTTA TERM 2736 2814668 - 2814636 - T 87 -12.1 -2.59068 | opp_overlap 2814630 2814636, overlap 2814635 2814633 2814638 GAAAACTTATAAGAC CAGGACTCTGGGA ATGATTA TACCAGAGTCCTG TTATATTTTATTGTT TERM 2737 2814636 - 2814668 + T 100 -12.1 -4.12416 | opp_overlap 2814636 2814635 2814633 2814638, overlap 2814630 GAAAACTTATAAGAC CAGGACTCTGGGA ATGATTA TACCAGAGTCCTG TTATATTTTATTGTT TERM 2738 2814666 - 2814638 - T 73 -8.9 -2.82161 | opp_overlap 2814636 2814630, overlap 2814636 2814635 2814633 AAACTTATAAGACCA GGACTCTGGGA ATGATTA TACCAGAGTCC TGTTATATTTTATTG Csac_2647 2815453 - 2815088 - | hypothetical protein TERM 2739 2815514 - 2815495 - R 100 -10 -5.37593 | opp_overlap 2815492 2815495 TTCTAAATGAAAAAA GCAGGGAC TTAA ATCCCTGC TCATTTTAGAGTAGC TERM 2740 2815495 - 2815514 + r 74 -9.3 -3.09831 | opp_overlap 2815495, overlap 2815492 TTCTAAATGAAAAAA GCAGGGA CTTAAA TCCCTGC TCATTTTAGAGTAGC TERM 2741 2815734 - 2815756 + r 100 -17.8 -3.724 | TCACTTTTGACCTAC TCCTCGCCTC CCA GAGGCGAGGA TTCTCTTGGTAGCTT Csac_2648 2817031 - 2815775 - | IS605 family transposase OrfB Csac_2649 2817434 - 2817024 - | transposase IS200-family protein TERM 2742 2817543 - 2817501 - R 82 -11.2 -2.53164 | opp_overlap 2817511 2817512 2817529, overlap 2817500 CTATTCACTATCAAG TTCGCATTCATCCCCGCCCT AAA AGGACGGGGCTTTCTGCGAA AATTCCTTGTAACTT TERM 2743 2817511 - 2817533 + r 81 -9 -3.86822 | opp_overlap 2817501 2817500, overlap 2817512 2817529 TCAAGTTCGCATTCA TCCCCGCCCT AAA AGGACGGGGC TTTCTGCGAAAATTC TERM 2744 2817512 - 2817532 + r 90 -12.5 -2.91772 | opp_overlap 2817501 2817500, overlap 2817511 2817529 CAAGTTCGCATTCAT CCCCGCCCT AAA AGGACGGGG CTTTCTGCGAAAATT Csac_2650 2818058 - 2817519 - | double-stranded RNA/RNA-DNA hybrid binding protein-like protein Csac_2651 2819715 - 2818276 - | hypothetical protein TERM 2745 2818412 - 2818444 + g 71 -7.1 -3.99805 | TCATGTTGAACTTTT TCTATTTTCTTTGCT ACT GGCAGGGAAAGTGGA TTTAGATTTTTGAGC TERM 2746 2819252 - 2819266 + g 71 -8.6 -3.24994 | opp_overlap 2819252, overlap 2819250 TTTTTATGGTAATTA GAACCT GAA AGGTTC TCTCTATATTTTTTA TERM 2747 2819441 - 2819477 + g 100 -8.3 -5.97979 | gap 1, opp_overlap 2819441 ACTACCCCTGTACAA CACTCTGCATTT-TGT GGTATA ATATAAATGCAGAGTG TTTTTTTGTTATTGT TERM 2748 2819748 - 2819799 + r 100 -14.8 -4.18644 | opp_overlap 2819753 2819761, overlap 2819757 2819761 TGAGATTTTTTCTTG TAAAATAAAAAAACCCCGAAGG GATTAAAA CCTTCGGGGTTTCTTTTTTTTA TTTGCTTTATATCCT TERM 2749 2819794 - 2819753 - R 100 -12.5 -4.07568 | opp_overlap 2819748 2819757 2819761, overlap 2819761 TTTTTTCTTGTAAAA TAAAAAAACCCCGAAGG GATTAAAA CCTTCGGGGTTTCTTTT TTTTATTTGCTTTAT TERM 2750 2819757 - 2819790 + r 100 -11.1 -6.25578 | opp_overlap 2819753 2819761, overlap 2819748 2819761 TTCTTGTAAAATAAA AAAACCCCGAAGG GATTAAAA CCTTCGGGGTTTC TTTTTTTTATTTGCT TERM 2751 2819761 - 2819786 + r 100 -11.9 -5.42458 | opp_overlap 2819753 2819761, overlap 2819757 2819748 TGTAAAATAAAAAAA CCCCGAAGG GATTAAAA CCTTCGGGG TTTCTTTTTTTTATT TERM 2752 2819786 - 2819761 - R 100 -11.9 -6.09196 | opp_overlap 2819761 2819757 2819748, overlap 2819753 TGTAAAATAAAAAAA CCCCGAAGG GATTAAAA CCTTCGGGG TTTCTTTTTTTTATT Csac_2652 2820582 - 2819806 - | RNA-binding S1 domain-containing protein Csac_2653 2822510 - 2820624 - | TRAG family protein TERM 2753 2820679 - 2820695 + g 74 -5.1 -4.76311 | overlap 2820682 AGGGCTTTTGCTTCT TGAGCTG CTA CAGCTTG TTCTTTTTCTTTCTG TERM 2754 2820682 - 2820692 + g 76 -6.8 -4.42156 | overlap 2820679 GCTTTTGCTTCTTGA GCTG CTA CAGC TTGTTCTTTTTCTTT TERM 2755 2822296 - 2822286 - G 70 -5.4 -4.3953 | TGCAATTAGAATAAA GGTT GTG AACC CGAGCCACGCTTTTT Csac_2654 2823454 - 2822507 - | hypothetical protein Csac_2655 2823745 - 2823482 - | hypothetical protein TERM 2756 2823731 - 2823756 + g 100 -9.1 -5.15167 | opp_overlap 2823743 2823749, overlap 2823743 2823752 2823753 2823755 CTTTGTTTTTGGTAT GCTACTGCT AAACAAAA AGCAGTAGC TTTTTATTGCTACTG TERM 2757 2823772 - 2823749 - R 93 -8.2 -5.27938 | opp_overlap 2823731 2823743 2823752 2823753 2823755, overlap 2823743 ACTGCTAAACAAAAA GCAGTAGC TTTTTATT GCTACTGC TTACAAGAAAAAGCT TERM 2758 2823797 - 2823785 - R 79 -4.8 -5.18726 | opp_overlap 2823755 2823753 2823793 TGCTTACAAGAAAAA GCTG TTTTG CAGC AGCTAAAGTGCTGCT TERM 2759 2823793 - 2823814 + r 95 -11.6 -3.77831 | opp_overlap 2823785 AGAAAAAGCTGTTTT GCAGCAGC TAAAGT GCTGCTGC TTTGAGTGTTGCTAC TERM 2760 2823834 - 2823860 + r 100 -16.7 -3.27544 | AGTGTTGCTACTTTT GCCCAAGCTGA CTTTA TCAGCTTGGGC TTGCTACTGGTTTTA TERM 2761 2823957 - 2823983 + r 100 -17.4 -3.21595 | AAAAGCGCTACTTTT GCCGAAGCTGAT AAT GTCAGCTTCGGC TTGCTACTGGAAATT Csac_2656 2824975 - 2824346 - | hypothetical protein TERM 2762 2825034 - 2825001 - R 86 -3.8 -5.75342 | opp_overlap 2825004 2825005, overlap 2825005 CCTCCTGAAAAAAAA TGAAGGCAGGGAAT TTGAAT ATTCCCTGCCATTT GCTACAGTTTTGAAA TERM 2763 2825004 - 2825031 + r 87 -9.9 -3.79021 | opp_overlap 2825001 2825005, overlap 2825005 CCTGAAAAAAAATGA AGGCAGGGAAT TTGAAT ATTCCCTGCCA TTTGCTACAGTTTTG TERM 2764 2825005 - 2825030 + r 100 -13.4 -2.86689 | opp_overlap 2825001 2825005, overlap 2825004 CTGAAAAAAAATGAA GGCAGGGAAT TTGAAT ATTCCCTGCC ATTTGCTACAGTTTT TERM 2765 2825030 - 2825005 - R 100 -13.4 -4.1299 | opp_overlap 2825005 2825004, overlap 2825001 CTGAAAAAAAATGAA GGCAGGGAAT TTGAAT ATTCCCTGCC ATTTGCTACAGTTTT Csac_2657 2825293 - 2825036 - | hypothetical protein TERM 2766 2825191 - 2825203 + g 84 -3.4 -5.69068 | ATAGCTCAAGGGCAT CAAG GATAA CTTG TTTTTTATCTTTTTC TERM 2767 2825251 - 2825264 + g 84 -4.5 -5.51353 | CTTCTGGAATCCTCA CAGCG TATA CGTTG TTTTTATTCTTTTTC TERM 2768 2825294 - 2825305 + r 78 -5.8 -4.85195 | opp_overlap 2825293 2825294 CATAGCAAAACACAC CCTG TAAA CAGG TTTTTCCCTTATTTT Csac_2658 2826304 - 2825594 - | hypothetical protein TERM 2769 2826610 - 2826629 + r 100 -12.2 -3.86194 | opp_overlap 2826610, overlap 2826613 2826628 TAGGACAACAAAAAA GCCTGCTT TTAA AAGCAGGC TTTCTGAGAGCAATT TERM 2770 2826629 - 2826610 - R 100 -12.2 -5.58179 | opp_overlap 2826610 2826613 2826628 TAGGACAACAAAAAA GCCTGCTT TTAA AAGCAGGC TTTCTGAGAGCAATT Csac_2659 2827305 - 2826655 - | hypothetical protein Csac_2660 2827658 - 2827326 - | hypothetical protein TERM 2771 2827576 - 2827587 + g 74 -4.4 -4.95547 | TCTTTCAAAGCATCT CTTG CAGC CAAG TTTTCTTCTTCTGAA TERM 2772 2827717 - 2827736 + r 70 -6.4 -4.24002 | opp_overlap 2827718, overlap 2827718 2827724 TCTGACAACAAAAAA ACCTGCTT TTAA AAGCAGGC TTTTGAACTTTCAAA TERM 2773 2827735 - 2827718 - R 100 -9.9 -5.88565 | opp_overlap 2827718 2827717 2827724 CTGACAACAAAAAAA CCTGCTT TTAA AAGCAGG CTTTTGAACTTTCAA TERM 2774 2827718 - 2827735 + r 81 -9.9 -3.13919 | opp_overlap 2827718, overlap 2827717 2827724 CTGACAACAAAAAAA CCTGCTT TTAA AAGCAGG CTTTTGAACTTTCAA TERM 2775 2827886 - 2827852 - R 100 -14.4 -5.75342 | opp_overlap 2827857 TTCTTCTAAAAAAAA CAAAAGGCAGACGC TTTATTT GCGCCTGCCTTCTG CCCTCAAGATGAAGG TERM 2776 2827857 - 2827881 + r 74 -8.5 -3.32963 | opp_overlap 2827852 CTAAAAAAAACAAAA GGCAGACGC TTTATTT GCGCCTGCC TTCTGCCCTCAAGAT Csac_2661 2828878 - 2827937 - | hypothetical protein TERM 2777 2828820 - 2828836 + g 89 -8 -5.03145 | AGCCACTTGATGTTT GTCCTG TTTGT CAGGAC TTTTTTGAAACCTTC Csac_2662 2830098 - 2829022 - | hypothetical protein Csac_2663 2832356 - 2830173 - | hypothetical protein Csac_2664 2834151 - 2832379 - | AAA ATPase Csac_2665 2834971 - 2834153 - | hypothetical protein TERM 2778 2834253 - 2834281 + g 76 -3.1 -5.40072 | opp_overlap 2834256, overlap 2834257 2834278 CCCTTTCCAGTAAGT ATAGTGGAAAGCG CAC CGCTTTCAATTGC TTTTTTTACAAGCAG TERM 2779 2834257 - 2834277 + g 79 -8.3 -4.03885 | opp_overlap 2834256, overlap 2834253 TTCCAGTAAGTATAG TGGAAAGCG CAC CGCTTTCAA TTGCTTTTTTTACAA Csac_2666 2835261 - 2834971 - | hypothetical protein TERM 2780 2835344 - 2835296 - R 73 -4.6 -5.055 | gap 1, opp_overlap 2835300, overlap 2835300 2835307 TGAAGCTTGAAAAAA GAAAGC-GAAAAGGGCTGTCCAA AACT CTGAACAGCCCGCTTCAGCTTAT ATTCTTAGATTAGTT TERM 2781 2835340 - 2835300 - R 100 -9.8 -5.04249 | gap 1, opp_overlap 2835300, overlap 2835296 2835307 GCTTGAAAAAAGAAA GC-GAAAAGGGCTGTCCAA AACT CTGAACAGCCCGCTTCAGC TTATATTCTTAGATT TERM 2782 2835332 - 2835307 - R 100 -11.9 -4.46617 | opp_overlap 2835300, overlap 2835300 2835296 AAAAGAAAGCGAAAA GGGCTGTCCAA AACT CTGAACAGCCC GCTTCAGCTTATATT Csac_2667 2835752 - 2835360 - | hypothetical protein Csac_2668 2836068 - 2835775 - | hypothetical protein Csac_2669 2836424 - 2836113 - | hypothetical protein Csac_2670 2837130 - 2836498 - | resolvase domain-containing protein TERM 2783 2837178 - 2837168 - H 73 -8.2 -3.44146 | TTGGTTTATAATTAA CCCC GAA GGGG GTATAGCCATGAGTG TERM 2784 2837908 - 2837887 - g 71 -7.3 -3.87956 | opp_overlap 2837887 AAAATCTATATGAAA TCACCAAGC CAAA GCCTGATGA TTTTGTATGCCCAAG Csac_2671 2837187 - 2838185 + | phage integrase family protein TERM 2785 2838360 - 2838348 - T 82 -6.3 -5.04325 | GCGAAAGTAGAAAAA GCTTA ACT TAAGC ACAGGTTTTTTGTTT Csac_2672 2839089 - 2838415 - | hypothetical protein Csac_2673 2841382 - 2839094 - | type III restriction enzyme, res subunit Csac_2674 2842302 - 2841388 - | hypothetical protein Csac_2675 2842652 - 2842305 - | hypothetical protein Csac_2676 2842935 - 2842645 - | DNA polymerase beta subunit Csac_2677 2844299 - 2842932 - | restriction modification system DNA specificity subunit Csac_2678 2844941 - 2844309 - | putative transcriptional regulator Csac_2679 2845611 - 2844988 - | putative transcriptional regulator TERM 2786 2845237 - 2845251 + g 84 -4.2 -5.44119 | AGAAGGTAATGAATT CCACGA AAT TCGTTG TTTTTTTAACATAAA Csac_2680 2848042 - 2845598 - | type I restriction-modification system, M subunit TERM 2787 2845793 - 2845804 + g 76 -5.8 -4.61824 | TTCAAAGAACTTTTC GAGC AATA GCTC TTTTGCTTCTTCTTC Csac_2681 2849234 - 2848203 - | nicotinate phosphoribosyltransferase Csac_2682 2850014 - 2849253 - | ABC transporter related Csac_2683 2850808 - 2850011 - | cobalt transport protein TERM 2788 2850369 - 2850357 - G 91 -4.8 -5.86609 | opp_overlap 2850355 TTAAAAAAAGAAAAA GGCT TAAAT AGCC TATCGATTTTTGAGT TERM 2789 2851920 - 2851891 - R 72 -2.7 -5.47964 | opp_overlap 2851900 2851906 AGAAAATAATAAAAA CCCACTTCAGGTT TTTC AACCCTTCGTGGG TTTATTCTTATTACT Csac_2686 2854555 - 2852090 - | glycoside hydrolase family protein TERM 2790 2852233 - 2852253 + g 71 -9 -3.21747 | opp_overlap 2852232 2852230 AGCTAACAAAAAGCT CGGTTGAC AATGG GTCAGCCG TTCCTAATGCCATAA TERM 2791 2852396 - 2852383 - G 70 -5.3 -4.53419 | overlap 2852379 CACCACAAGAAGAAA TGACA TTTC TGTCA GGCAGCAGTTTTAAA TERM 2792 2854355 - 2854376 + g 83 -8.8 -4.2142 | opp_overlap 2854355 GCACCCGGGAGTATA TCCTTCTG AGGCAC CAGAAGGA TTGTTTTCGCATCTT TERM 2793 2854376 - 2854355 - G 73 -9.5 -2.78816 | opp_overlap 2854355 GCACCCGGGAGTATA TCCTTCTGA GGCA CCAGAAGGA TTGTTTTCGCATCTT TERM 2794 2854574 - 2854538 - G 74 -9.6 -3.09384 | gap 1, overlap 2854537 AACTAAAGTACAAAT CGTCTGAACGGC-ACAC ATAT ATATCACCGTTCAGACG GCTGGGGTATTTATT Csac_2687 2855749 - 2854661 - | mannonate dehydratase Csac_2688 2857404 - 2855779 - | mannitol dehydrogenase domain-containing protein TERM 2795 2857328 - 2857351 + g 79 -11.2 -2.78032 | opp_overlap 2857320 2857333, overlap 2857327 2857324 2857333 ATAAAATCCTCTATA TCAAATTGAG GCAT CTCAATTTGA ATCTTTTGCCACAAA Csac_2689 2859537 - 2857447 - | Alpha-glucuronidase TERM 2796 2857476 - 2857487 + g 80 -5.8 -4.9725 | GTCTTCCTTTTTCAT CAGG AATG CCTG TTTTTCTGTAAAAGT Csac_2690 2861155 - 2859623 - | response regulator receiver protein Csac_2691 2863016 - 2861175 - | integral membrane sensor signal transduction histidine kinase TERM 2797 2861848 - 2861858 + g 73 -5.4 -4.68424 | overlap 2861856 TTTCTTTGTATTTCA GAGA GCA TCTC TTTTTCAATGAGTTC TERM 2798 2863093 - 2863074 - R 70 -4.2 -5.00138 | opp_overlap 2863074 2863069, overlap 2863067 TAGGTAAATTAAAAA GTGGGCTT TTTA ACACCCAC TTTTATTTATTTCTA Csac_2692 2864060 - 2863161 - | binding-protein-dependent transport systems inner membrane component Csac_2693 2865037 - 2864099 - | binding-protein-dependent transport systems inner membrane component TERM 2799 2865109 - 2865150 + r 87 -10.3 -3.69685 | opp_overlap 2865095 2865105 2865114 2865117 ATTCTTAAAAAGTTT TTAAAGAAGGGAAGAGG ATGTTTTG CCTCTCCCCTTCCTTAA TTATCTATATCTTAT TERM 2800 2865145 - 2865114 - R 95 -12.4 -3.61889 | opp_overlap 2865109, overlap 2865095 2865105 2865117 TAAAAAGTTTTTAAA GAAGGGAAGAGG ATGTTTTG CCTCTCCCCTTC CTTAATTATCTATAT TERM 2801 2865142 - 2865117 - R 77 -8.3 -3.92832 | opp_overlap 2865109, overlap 2865114 2865105 AAAGTTTTTAAAGAA GGGAAGAGG ATGTTTTG CCTCTCCCC TTCCTTAATTATCTA Csac_2694 2866845 - 2865169 - | extracellular solute-binding protein TERM 2802 2866741 - 2866753 + g 100 -7.7 -5.46657 | TACAACTTTTTTAGA TGCAG CTT CTGCA TTTTTTGTTCCAATA Csac_2695 2868065 - 2866980 - | uroporphyrinogen-III decarboxylase-like protein TERM 2803 2868120 - 2868155 + r 74 -9.1 -3.00786 | opp_overlap 2868121 CTTTCATTATTAAAA ATTATAGGGAAGACC CTAAAA GGCCTTCCCTATAAA TATATCACTTTTAAA TERM 2804 2868154 - 2868121 - R 100 -15.5 -4.77036 | opp_overlap 2868120 TTTCATTATTAAAAA TTATAGGGAAGACCC TAAA AGGCCTTCCCTATAA ATATATCACTTTTAA Csac_2696 2869844 - 2868174 - | ABC-type sugar transport system periplasmic component-like protein TERM 2805 2869214 - 2869231 + g 72 -4.1 -4.93595 | opp_overlap 2869214, overlap 2869227 TAAATGTAAATCCAA TTGTAGG TTTG CCTTCAA TTTTTGGATTTTTCT TERM 2806 2869227 - 2869239 + g 74 -2.7 -5.30616 | opp_overlap 2869214, overlap 2869214 AATTGTAGGTTTGCC TTCAA TTT TTGGA TTTTTCTTTACATAA Csac_2697 2870153 - 2871229 + | histidinol-phosphate aminotransferase Csac_2698 2871316 - 2872317 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2807 2872524 - 2872547 + GF 71 -6.8 -4.08394 | TTAGTTTTATATGCG TGCCTGTATT AGAG AGTATAGGCA TTTTAGAAAAACTAT Csac_2699 2872289 - 2873161 + | prephenate dehydrogenase TERM 2808 2873774 - 2873761 - g 70 -6.7 -4.15453 | opp_overlap 2873759 2873761 2873767 2873770, overlap 2873744 GAACTTATGTTAAAA TCTGC CGGA GCAGA TATTGCTACTTGTTT Csac_2700 2873158 - 2874459 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2809 2874439 - 2874486 + T 95 -9.2 -5.19819 | TATGAGATTCTTCTT GGGCACAGCAAAAAGGTATAAA ATGT TCTTTGCCTTTTCACTGTGCCC TTTTTCATTTTATTT Csac_2701 2875314 - 2874496 - | xylose isomerase domain-containing protein Csac_2702 2875465 - 2875860 + | hypothetical protein TERM 2810 2875891 - 2875923 + F 100 -15.8 -3.57144 | opp_overlap 2875891 CAGAAAAATACAAAA GCCGCCGTATTTTT TGTAC AAAAATATGGCGGC TTTAAAAGTAAAAGG TERM 2811 2875923 - 2875891 - f 100 -13.6 -5.02287 | opp_overlap 2875891 CAGAAAAATACAAAA GCCGCCGTATTTTT TGTAC AAAAATATGGCGGC TTTAAAAGTAAAAGG Csac_2703 2875952 - 2876509 + | hypothetical protein TERM 2812 2876518 - 2876548 + F 82 -7.8 -4.67904 | gap 1, opp_overlap 2876523, overlap 2876523 AGAATAGACAAAAAA TAA-AAGCGAGTC TTTTTT GACTCGCTTATTA TTTTTGAAATTGGTG TERM 2813 2876542 - 2876523 - f 100 -9.3 -5.51612 | opp_overlap 2876518 2876523 AGACAAAAAATAAAA GCGAGTC TTTTTT GACTCGC TTATTATTTTTGAAA TERM 2814 2876523 - 2876542 + F 88 -9.3 -4.31587 | opp_overlap 2876523, overlap 2876518 AGACAAAAAATAAAA GCGAGTC TTTTTT GACTCGC TTATTATTTTTGAAA TERM 2815 2876981 - 2876967 - f 77 -4.2 -5.38398 | AGAAAAATAGAAAAA CTACCA GGA TGGGAG GACAGCCTACTATGA Csac_2704 2876993 - 2878093 + | hypothetical protein TERM 2816 2878361 - 2878349 - g 70 -3.4 -4.99056 | overlap 2878337 CAACAGAATTAAAAA CTCT GCTAT AGAG GACATATTCAAAGTG Csac_2705 2878245 - 2878862 + | GCN5-related N-acetyltransferase TERM 2817 2878874 - 2878906 + T 77 -8.4 -3.88787 | gap 1, opp_overlap 2878867 2878873 2878874, overlap 2878904 TTAGAAACCAGCAAG GGGGCTG-CCGTTAA AATA TTTTCGGTCAGCCCC TTTATCAAAGTGTCA Csac_2706 2879253 - 2878927 - | coat F domain-containing protein Csac_2707 2880218 - 2879514 - | ErfK/YbiS/YcfS/YnhG family protein Csac_2708 2880711 - 2880325 - | aspartate 1-decarboxylase Csac_2709 2881565 - 2880720 - | pantoate--beta-alanine ligase Csac_2710 2882359 - 2881565 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase Csac_2711 2883204 - 2882362 - | 6-phosphogluconate dehydrogenase, NAD-binding TERM 2818 2883250 - 2883233 - H 100 -7 -5.59502 | opp_overlap 2883233 TAAAAAATTAAAAAA GGCAGA ACAGAG TCTGCC TTTCTTTGCAAAATG TERM 2819 2883233 - 2883250 + H 78 -7 -4.42062 | opp_overlap 2883233 TAAAAAATTAAAAAA GGCAGA ACAGAG TCTGCC TTTCTTTGCAAAATG TERM 2820 2883397 - 2883373 - H 74 -9.4 -2.72036 | gap 1, opp_overlap 2883372 2883371 2883366, overlap 2883370 TAAATGGATATAGTA TGGC-TCGACA TTCT TGTCGATGCCA CCTTATATTAATTAT Csac_2712 2883507 - 2884025 + | Ferritin, Dps family protein TERM 2821 2884499 - 2884523 + T 100 -7.9 -5.68438 | opp_overlap 2884499 2884503 AATTAAAAAAGCAAA TAAGGCCCTGT AAA AAAGGGCTTTA TTTTTTATTTAATAA TERM 2822 2884523 - 2884499 - T 72 -5.7 -4.46531 | opp_overlap 2884499, overlap 2884503 AATTAAAAAAGCAAA TAAGGCCCTGT AAA AAAGGGCTTTA TTTTTTATTTAATAA TERM 2823 2884722 - 2884756 + T 93 -10.1 -4.45693 | opp_overlap 2884722 AACTGTAAAAATTTA GGGTAACTGCTCC ACTATCTTA GGAGTGGTTACCC TTTATATTTATATTC Csac_2713 2885724 - 2884741 - | phage integrase family protein TERM 2824 2886567 - 2886551 - g 74 -5.1 -4.84642 | overlap 2886553 TCTAAAGCAATAAAA GATTCAC ATT GTGAAGC AATTCAAATAAGTGA TERM 2825 2887323 - 2887313 - g 76 -3.2 -5.35721 | ATAGAAGAACAAAAA GCTA TAA CAGC GGAGGAATTGGAAAA Csac_2714 2885942 - 2887657 + | transposase, IS204/IS1001/IS1096/IS1165 family protein TERM 2826 2888445 - 2888419 - g 71 -4.4 -4.85599 | opp_overlap 2888419 2888421, overlap 2888421 GTCATCTCAGAAAAA CCGCATTGAAAA GCA TCTTCAAAGCTG TGGTTTTAAACTTTC Csac_2715 2887994 - 2888905 + | transposase, IS111A/IS1328/IS1533 TERM 2827 2889044 - 2889028 - g 71 -5.1 -4.57482 | overlap 2889035 CGAGGGACAAAGAAA GCAATAG TAG CTCTTGC TAGAAAATTACTGGT Csac_2716 2888935 - 2889210 + | hypothetical protein TERM 2828 2889407 - 2889458 + T 76 -6.3 -4.54404 | gap 2, overlap 2889407 2889408 2889449 TCTGATTTTTCTGGT TCTAA-TTTG-TTTTAGATTGCTTC CATG GAAGCAATCTAAAAGCGAACTGAGG TTTGTTATTAATTTA TERM 2829 2891123 - 2891093 - T 82 -9.7 -3.72757 | overlap 2891094 CATAAGGTAACAGAA CCCCCGAGGGC AATACTTGA ACCCTCGGGGA TAAATATTGAAAGGT TERM 2830 2891122 - 2891094 - T 83 -11 -2.82931 | overlap 2891093 ATAAGGTAACAGAAC CCCCGAGGGC AATACTTGA ACCCTCGGGG ATAAATATTGAAAGG Csac_2718 2891899 - 2891138 - | 2-deoxy-D-gluconate 3-dehydrogenase Csac_2719 2892762 - 2891932 - | 5-keto-4-deoxyuronate isomerase Csac_2720 2893814 - 2892786 - | ribokinase-like domain-containing protein TERM 2831 2893082 - 2893096 + g 71 -7.2 -3.885 | opp_overlap 2893069 2893072 AAGCAGAAAGACTTC TTCTTG CAG CAAGAA TTATTCTCTCCAAGT TERM 2832 2893163 - 2893145 - G 71 -4.6 -4.87133 | overlap 2893140 2893146 ACCTTTCAAACAAAA CCTTTTGA CCA TCAAAAGT CAGGTCAATACCCTC TERM 2833 2893162 - 2893146 - G 72 -8.1 -3.51557 | overlap 2893140 2893145 CCTTTCAAACAAAAC CTTTTGA CCA TCAAAAG TCAGGTCAATACCCT Csac_2721 2896229 - 2893971 - | heparinase II/III family protein TERM 2834 2895735 - 2895722 - G 74 -8.1 -3.78124 | opp_overlap 2895719 ACCAATCATTAAGAA GGGGA TCAA TCCCC AGCCTTTTTGCCCCC TERM 2835 2895743 - 2895757 + g 84 -10 -3.67878 | CAATCCCCAGCCTTT TTGCCC CCT GGGCAA TTATATTACGCTCAT TERM 2836 2896263 - 2896321 + r 80 -6.2 -4.81863 | gap 1, opp_overlap 2896264 2896269 2896272 2896274 2896276, overlap 2896264 2896271 2896272 2896274 TTATAATTTTTGAAA ATCTAATTA-CAGAGGCTTCCTTCC GAACGTGGAG GGAAGGAAGCCTCTGGTTGATAGAG TTTTATTATGAGTTT TERM 2837 2896320 - 2896264 - R 77 -7.5 -4.12198 | gap 1, opp_overlap 2896263 2896264 2896271 2896272 2896274, overlap 2896269 2896272 2896274 2896276 TATAATTTTTGAAAA TCTAATTA-CAGAGGCTTCCTTCC GAACGTGGAG GGAAGGAAGCCTCTGGTTGATAGA GTTTTATTATGAGTT TERM 2838 2896264 - 2896320 + r 80 -9.7 -3.47491 | gap 1, opp_overlap 2896264 2896269 2896272 2896274 2896276, overlap 2896263 2896271 2896272 2896274 TATAATTTTTGAAAA TCTAATTA-CAGAGGCTTCCTTCC GAACGTGGAG GGAAGGAAGCCTCTGGTTGATAGA GTTTTATTATGAGTT TERM 2839 2896271 - 2896312 + r 100 -14.6 -3.22339 | opp_overlap 2896269 2896264 2896272 2896274 2896276, overlap 2896264 2896263 2896272 2896274 TTTGAAAATCTAATT ACAGAGGCTTCCTTCC GAACGTGGAG GGAAGGAAGCCTCTGG TTGATAGAGTTTTAT TERM 2840 2896311 - 2896272 - R 100 -18.1 -2.84586 | opp_overlap 2896271 2896264 2896263 2896272 2896274, overlap 2896269 2896264 2896274 2896276 TTGAAAATCTAATTA CAGAGGCTTCCTTCC GAACGTGGAG GGAAGGAAGCCTCTG GTTGATAGAGTTTTA TERM 2841 2896272 - 2896311 + r 100 -18.1 -2.52681 | opp_overlap 2896272 2896269 2896264 2896274 2896276, overlap 2896271 2896264 2896263 2896274 TTGAAAATCTAATTA CAGAGGCTTCCTTCC GAACGTGGAG GGAAGGAAGCCTCTG GTTGATAGAGTTTTA TERM 2842 2896274 - 2896309 + r 100 -14.9 -2.79291 | opp_overlap 2896272 2896269 2896264 2896274 2896276, overlap 2896272 2896271 2896264 2896263 GAAAATCTAATTACA GAGGCTTCCTTCC GAACGTGGAG GGAAGGAAGCCTC TGGTTGATAGAGTTT TERM 2843 2896309 - 2896274 - R 100 -14.9 -2.9652 | opp_overlap 2896274 2896272 2896271 2896264 2896263, overlap 2896272 2896269 2896264 2896276 GAAAATCTAATTACA GAGGCTTCCTTCC GAACGTGGAG GGAAGGAAGCCTC TGGTTGATAGAGTTT TERM 2844 2896307 - 2896276 - R 89 -11.7 -3.02385 | opp_overlap 2896274 2896272 2896271 2896264 2896263, overlap 2896274 2896272 2896269 2896264 AAATCTAATTACAGA GGCTTCCTTCC GAACGTGGAG GGAAGGAAGCC TCTGGTTGATAGAGT Csac_2722 2904116 - 2896335 - | S-layer domain-containing protein TERM 2845 2898308 - 2898292 - G 78 -6.6 -4.54449 | opp_overlap 2898292 ACATTTGAGATAAAA GCTGTA TTTTC TACAGC TTGTGATGCTATCAT TERM 2846 2898863 - 2898841 - G 81 -9.2 -3.65351 | opp_overlap 2898837 2898844, overlap 2898844 TCAGTGCCAGTTAAA CCACCTGTAT TGA ATACAGGTTG CATATTTTCTGAATA TERM 2847 2898860 - 2898844 - G 74 -9.5 -2.94144 | opp_overlap 2898844 2898837, overlap 2898841 GTGCCAGTTAAACCA CCTGTAT TGA ATACAGG TTGCATATTTTCTGA TERM 2848 2898844 - 2898860 + g 76 -9.5 -3.30972 | opp_overlap 2898841 2898844, overlap 2898837 GTGCCAGTTAAACCA CCTGTAT TGA ATACAGG TTGCATATTTTCTGA TERM 2849 2901433 - 2901446 + g 72 -8.1 -3.61654 | GCATCAAGAACTTTA CCCTC TGGT GAGGG TTTCAGATACCTATA TERM 2850 2902472 - 2902489 + g 77 -9.9 -3.25836 | overlap 2902470 GATAAATGTATGCTC CTTCTGC TGTT GCAGAAG TATTAAATTTGTTAT Csac_2723 2906414 - 2904312 - | hypothetical protein TERM 2851 2906500 - 2906476 - R 72 -5.9 -4.4874 | TTGAAAAATCTAAAA TTTATCTCTTC TGT AAAGAAATAAA CCGGAACTTTCACTT Csac_2724 2907398 - 2906514 - | binding-protein-dependent transport systems inner membrane component Csac_2725 2908339 - 2907416 - | binding-protein-dependent transport systems inner membrane component TERM 2852 2907875 - 2907894 + g 78 -5.8 -4.85267 | gap 1, opp_overlap 2907874 2907877, overlap 2907875 2907877 GTCACCATAAAAATT G-ATGGGTT CTA AACCCATGC TTTTTAATACTTTAT TERM 2853 2907877 - 2907891 + g 73 -8.6 -3.30145 | opp_overlap 2907874 2907877, overlap 2907875 2907875 CACCATAAAAATTGA TGGGTT CTA AACCCA TGCTTTTTAATACTT Csac_2726 2910047 - 2908437 - | extracellular solute-binding protein TERM 2854 2909640 - 2909598 - G 87 -12.4 -3.2056 | opp_overlap 2909597 2909598, overlap 2909630 AGGTACAGCTATCAA TTTTCCAAAAAATTTATTAG CTT CCAAAAAATCTTTTGGAAAA GCTTTGTAAAGCCCT Csac_2727 2912581 - 2910212 - | helix-turn-helix domain-containing protein TERM 2855 2912727 - 2912689 - R 88 -6.1 -5.45056 | gap 1, opp_overlap 2912694 2912698, overlap 2912694 2912696 TTAAAAAAAAAGAAA TAAAGCAGCAGGGGAAGA ATAC TCTTCCCCCTCAG-TTTA AATATCGTTATTTGT TERM 2856 2912723 - 2912694 - R 76 -8.5 -3.5648 | opp_overlap 2912694 2912698, overlap 2912689 2912696 AAAAAAGAAATAAAG CAGCAGGGGAAGA ATAC TCTTCCCCCTCAG TTTAAATATCGTTAT TERM 2857 2912721 - 2912696 - R 78 -9.7 -3.29545 | opp_overlap 2912694 2912698, overlap 2912694 2912689 AAAAGAAATAAAGCA GCAGGGGAAGA ATAC TCTTCCCCCTC AGTTTAAATATCGTT Csac_2728 2916195 - 2912725 - | hypothetical protein Csac_2729 2917076 - 2916213 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Csac_2730 2918231 - 2917092 - | glycosy hydrolase family protein Csac_2734 2924513 - 2921439 - | glycoside hydrolase family protein TERM 2858 2922332 - 2922358 + g 95 -8.2 -5.00884 | CAAACCTGTTTTGCT TTGAGAAAATAA TAT TTATCTTCTCAA TTTTTTGCACAGCAT TERM 2859 2922404 - 2922427 + g 78 -6.8 -4.56597 | opp_overlap 2922419 CTTTAAGTGCAATCT GAGATTTTGT TATA ACAAAACCTC TTTTTGCCCAGGCCA TERM 2860 2922941 - 2922985 + g 74 -8 -3.83881 | gap 1 CTTTGAGGTTTCCAG GACCATTTCCCAT-TGCGTGT GCAT ACTCGCACATGAAAAATGGTC TTCTCTCTTGTTTTT Csac_2735 2925353 - 2924568 - | regulatory protein, IclR Csac_2736 2926156 - 2925425 - | beta-lactamase domain-containing protein Csac_2737 2927183 - 2926182 - | oxidoreductase domain-containing protein Csac_2738 2928216 - 2927167 - | oxidoreductase domain-containing protein TERM 2861 2927740 - 2927722 - G 75 -8.9 -3.53811 | opp_overlap 2927713 2927737 TTTACTTCGGTCAAA GACCCAT TCTCC ATGGGTC ACGTCGTGCCCTTTC Csac_2739 2929444 - 2928260 - | mandelate racemase/muconate lactonizing protein Csac_2740 2930324 - 2929470 - | binding-protein-dependent transport systems inner membrane component TERM 2862 2930278 - 2930289 + g 90 -3 -6.07374 | ATGATATACACCACC GTTA GCGT TAAC TTTTTTCTTTTTTGT Csac_2741 2931225 - 2930344 - | binding-protein-dependent transport systems inner membrane component TERM 2863 2931323 - 2931337 + r 72 -7.2 -3.7941 | TCCTATCTCTTTTTA CTTCAT CCT ATGAAG TTGTTCTAAGGCGTC Csac_2742 2932678 - 2931320 - | extracellular solute-binding protein Csac_2743 2933624 - 2932734 - | dihydrodipicolinate synthetase TERM 2864 2933143 - 2933129 - G 73 -5.8 -4.4009 | opp_overlap 2933128 GCTTACGCGATAAAA TAATGT AAT ACATTA AATTTTGCATACTGC TERM 2865 2934642 - 2934628 - g 70 -2.8 -5.1925 | TTAGAAGGCAAAAAA GATATC TTC GGTATC TACACTTTCTTCGGC TERM 2866 2935173 - 2935158 - g 74 -4.7 -4.84918 | TTTACAAAGAGAAAA CTTGC GTCGAG GCAAG TGGAAAAACGGAGTA Csac_2744 2934094 - 2935245 + | transposase, mutator type Csac_2745 2936089 - 2935196 - | hypothetical protein TERM 2867 2935474 - 2935489 + g 73 -6.1 -4.49756 | opp_overlap 2935473 CACCGCTTGCAAGAG CCAGC AAAAAA GCTGG TTTTAGTCTTTCACC Csac_2746 2936672 - 2936091 - | hypothetical protein Csac_2747 2936927 - 2936673 - | hypothetical protein TERM 2868 2937094 - 2937064 - R 89 -9.1 -4.53419 | TAGTACAACAACAAA GGGGCTCGTTA TTAGACAGC TAACAAGCCCC TGATGGTTATTTTTA Csac_2748 2938516 - 2937125 - | glycoside hydrolase family protein TERM 2869 2938879 - 2938855 - R 85 -10.7 -3.45945 | opp_overlap 2938862 2938863, overlap 2938863 TTGATTTATAATTAA CCCCGAAAGGG GTG CCCTTTTGGAG GGCAGTCCATTGTAT TERM 2870 2938863 - 2938887 + r 71 -8.5 -2.89285 | opp_overlap 2938855 2938863, overlap 2938862 2938884 TAATTAACCCCGAAA GGGGTGCCCTT TTG GAGGGCAGTCC ATTGTATTTGCAATG TERM 2871 2938884 - 2938905 + r 80 -9.5 -3.484 | opp_overlap 2938863, overlap 2938863 2938862 CCCTTTTGGAGGGCA GTCCATTGT ATTT GCAATGGAC TTGTGATATAATCAC TERM 2872 2938989 - 2939014 + r 100 -13.4 -4.18018 | TGATTTTAGTGGGGT GGGAGAAAGG TTTTCT CCTTTCTCCC TTTTAAATACCCCAA TERM 2873 2939320 - 2939337 + r 100 -11.3 -4.1964 | opp_overlap 2939320 CGGTTTACAAAAAAA GGCAGGT AACA ACCTGCC TTTTCCCCTCTTCAA TERM 2874 2939337 - 2939320 - R 100 -11.3 -5.60993 | opp_overlap 2939320 CGGTTTACAAAAAAA GGCAGGT AACA ACCTGCC TTTTCCCCTCTTCAA Csac_2749 2939836 - 2939567 - | hypothetical protein TERM 2875 2939896 - 2939866 - R 100 -9.3 -5.40072 | gap 1, opp_overlap 2939871, overlap 2939871 TTTGTTTTAAAAAAA TATAA-GGCAGATA TTGT TATCTGCCTTTATA ATCTAAAGAGAACCT TERM 2876 2939871 - 2939890 + r 93 -10.8 -4.0162 | opp_overlap 2939866 2939871 TTTAAAAAAATATAA GGCAGATA TTGT TATCTGCC TTTATAATCTAAAGA TERM 2877 2939890 - 2939871 - R 100 -10.8 -4.2757 | opp_overlap 2939871, overlap 2939866 TTTAAAAAAATATAA GGCAGATA TTGT TATCTGCC TTTATAATCTAAAGA Csac_2750 2940132 - 2939911 - | hypothetical protein Csac_2751 2940342 - 2940950 + | hypothetical protein TERM 2878 2940971 - 2940993 + T 89 -10.6 -3.84061 | overlap 2940969 AAAATAATATTTTCC GTCCCTTCAA TTC TAGAAGGGAC TATTATTTTGTTGTA Csac_2752 2941809 - 2940952 - | D12 class N6 adenine-specific DNA methyltransferase Csac_2753 2942436 - 2944220 + | hypothetical protein Csac_2754 2944236 - 2945048 + | DNA methylase N-4/N-6 domain-containing protein Csac_2755 2945026 - 2945769 + | DNA methylase N-4/N-6 domain-containing protein TERM 2879 2945804 - 2945773 - T 74 -5.9 -4.57341 | opp_overlap 2945771 2945773, overlap 2945750 AATTTTCTTTAAAAA GGCTGCTTTCC TTTCTTTCGT GGAAAGTAGCC TCTTCTTCTCTGTTA TERM 2880 2945773 - 2945804 + T 73 -8.1 -3.56668 | opp_overlap 2945750 2945773, overlap 2945771 AATTTTCTTTAAAAA GGCTGCTTTCC TTTCTTTCGT GGAAAGTAGCC TCTTCTTCTCTGTTA Csac_2756 2947980 - 2945944 - | methyl-accepting chemotaxis sensory transducer TERM 2881 2946282 - 2946292 + g 75 -5.4 -4.88795 | CCTTCATACTCTCTT CAAG CCT CTTG TTTGTTTTGTTGAAT TERM 2882 2947253 - 2947273 + g 70 -5.4 -4.47611 | TACTCATACTCACCT GACATTGC TTTTT GCAAGGTC TCTTTTTTTATGATA Csac_2757 2948126 - 2949175 + | Allergen V5/Tpx-1 family protein Csac_2758 2949206 - 2949391 + | hypothetical protein Csac_2759 2950241 - 2949405 - | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 2883 2949699 - 2949716 + g 70 -2.7 -5.18561 | gap 1, opp_overlap 2949680, overlap 2949703 AACAACAATTGGTGG GCATGGGT CAG ATCC-TGC TTTTTTCACTGTTTC Csac_2760 2950919 - 2950284 - | hypothetical protein Csac_2761 2951967 - 2950930 - | hypothetical protein Csac_2762 2953090 - 2951993 - | putative PAS/PAC sensor protein Csac_2763 2953669 - 2953157 - | hypothetical protein TERM 2884 2953697 - 2953712 + r 91 -7.6 -5.26316 | CTCCTTCTTTTGCAA TGTTCC ACGT GGAACA TTTTTTATGGCATGA Csac_2764 2954568 - 2953717 - | parB-like partition protein Csac_2765 2955357 - 2954587 - | cobyrinic acid a,c-diamide synthase TERM 2885 2955421 - 2955406 - H 74 -7.6 -3.87505 | opp_overlap 2955401 2955406 ATTATATCACAAGAA TGTTCC ACGT GGAACA TTATGTATTTATTAT TERM 2886 2955406 - 2955421 + H 74 -7.6 -3.84463 | opp_overlap 2955406, overlap 2955401 ATTATATCACAAGAA TGTTCC ACGT GGAACA TTATGTATTTATTAT Csac_2766 2955573 - 2956718 + | phosphate binding protein Csac_2767 2956756 - 2958399 + | alkaline phosphatase TERM 2887 2958414 - 2958441 + T 100 -13.5 -4.85782 | opp_overlap 2958411 2958429 2958431 GATTAAAGATAATTT GTGCCCTCACA AAAATG TGTGGGGGCAC TTTCTTTTTAAAAAA TERM 2888 2958483 - 2958459 - T 100 -9.3 -5.75342 | overlap 2958431 2958429 2958461 TCTTTTTAAAAAAAA TACCTCCTCAT ATT ACGAGGAGGTC TGCGGGGATTTTTTA TERM 2889 2958481 - 2958461 - T 100 -11.9 -4.52949 | overlap 2958431 2958429 2958459 TTTTTAAAAAAAATA CCTCCTCAT ATT ACGAGGAGG TCTGCGGGGATTTTT Csac_2768 2959313 - 2958471 - | parB-like partition protein TERM 2890 2959130 - 2959152 + g 88 -4.9 -5.4833 | opp_overlap 2959130 CACGTTTTCTCACAA TTATTGGCT GCAAA AGCCCATAA TTTTTTATTGACTCA Csac_2769 2960204 - 2959443 - | methyltransferase GidB Csac_2770 2962086 - 2960206 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Csac_2771 2963523 - 2962156 - | tRNA modification GTPase TrmE TERM 2891 2963079 - 2963102 + g 71 -4.6 -4.86939 | overlap 2963071 2963090 2963092 CTTTTAACTGTTTTG CAGCGTTTTT TTGC AAAAGCTCTG TTTTTGAATTTATTA TERM 2892 2963589 - 2963568 - R 100 -13.1 -4.68132 | opp_overlap 2963571 2963587 CAAGATACAAACAAA GCAGGGTAA AAAC TTACCCTGC TTCAAGCACTTTTTT Csac_2772 2964229 - 2963603 - | single-stranded nucleic acid binding R3H domain-containing protein Csac_2773 2965309 - 2964260 - | 60 kDa inner membrane insertion protein TERM 2893 2964311 - 2964325 + g 70 -2.8 -5.20216 | overlap 2964304 2964313 TGTCATTTGCTGTTT TAGCTT TTC AAGCTC TTTTTTCCTCATCTG TERM 2894 2964468 - 2964488 + g 79 -4.7 -5.2291 | overlap 2964469 2964471 TTTCCCTGCTGCATT TTAGCTTGA TTT TCAAGCTGC TTTTTCTTCTCCTCT TERM 2895 2964469 - 2964487 + g 74 -8.2 -3.72119 | overlap 2964468 2964471 TTCCCTGCTGCATTT TAGCTTGA TTT TCAAGCTG CTTTTTCTTCTCCTC TERM 2896 2964471 - 2964485 + g 73 -8.6 -3.42342 | overlap 2964469 2964468 CCCTGCTGCATTTTA GCTTGA TTT TCAAGC TGCTTTTTCTTCTCC Csac_2774 2965573 - 2965346 - | hypothetical protein Csac_2775 2966008 - 2965577 - | ribonuclease P protein component Csac_2776 2966176 - 2966042 - | ribosomal protein L34 TERM 2897 2966231 - 2966241 + H 79 -6.8 -4.58213 | TATGATTTTAACTGC GTGG TTG CCAC TTTTATACTTACTTA TERM 2898 2966437 - 2966423 - g 71 -5 -4.67357 | opp_overlap 2966423, overlap 2966420 2966424 AATGAAGAAAAACAA CTTGTC GCA GACAAA GTCTATCTCAACAAG TERM 2899 2966757 - 2966769 + G 73 -3.3 -5.15167 | CATAGTATCCTGTGC GGGGA TGT TGCCC TTTTTGTTGATGGTA Csac_2777 2966409 - 2967890 + | GerA spore germination protein Csac_2778 2967941 - 2969047 + | spore germination protein Csac_2779 2969044 - 2970162 + | spore germination B3 GerAC family protein