TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.690051 %AT, 1492689 nt, 8912 terms. Intergenic: 0.744534 %AT, H2T: 121532 nt, 978 terms; T2T: 28561 nt, 630 terms; H2H: 32273 nt, 600 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|157414322|ref|NC_009839.1| Campylobacter jejuni subsp. jejuni 81116, complete genome (length 1628115) dnaA 1 - 1323 + | chromosomal replication initiation protein TERM 1 2094 - 2113 + G 73 -3.7 -5.31275 | opp_overlap 2093 2092 GGAAATGCAAAAACT TTTCTAT GAAAAA ATAGAAA TTTTTTATGATCAAA TERM 2 2291 - 2276 - g 74 -3.3 -5.42862 | ATAGTCTTAAAAAAA TCAGT GTTGTA ACTGA AAAAATGAAACTTCA TERM 3 2478 - 2464 - g 72 -2.8 -5.35721 | overlap 2466 ATAGAAGAAGAAAAA TTCACT TTA AGTGTA AATGAACCTAATTCA dnaN 1483 - 2550 + | DNA polymerase III subunit beta TERM 4 2678 - 2642 - g 79 -7.3 -4.386 | GAAGCTGTTAGAAAA CGCCCAGGTATGTATAT AGG AGATACAAACATAGGCG GACTTCATCATATGA TERM 5 3285 - 3272 - g 74 -5.3 -4.88687 | opp_overlap 3272 TTAAATAAAAAAGAA GCTTT AACT AAAGC AATTTTCTTTAGTGT gyrB 2579 - 4888 + | DNA gyrase subunit B TERM 6 4893 - 4921 + T 100 -10.5 -5.18371 | opp_overlap 4894 4902, overlap 4894 TGGATGTGTAAATTT ATCATTGAAGAAA TGA TTTCTTCAATGAG TTTTGTTTTGTAAGA TERM 7 4894 - 4920 + T 100 -14 -3.69938 | opp_overlap 4894 4902, overlap 4893 GGATGTGTAAATTTA TCATTGAAGAAA TGA TTTCTTCAATGA GTTTTGTTTTGTAAG TERM 8 4920 - 4894 - T 100 -14 -2.64803 | opp_overlap 4894 4893, overlap 4902 GGATGTGTAAATTTA TCATTGAAGAAA TGA TTTCTTCAATGA GTTTTGTTTTGTAAG C8J_0004 5255 - 4914 - | putative periplasmic protein C8J_0005 6496 - 5258 - | hypothetical protein TERM 9 5696 - 5709 + g 76 -5.3 -5.12172 | AGAACCTTCCATTTT TTCAC CATC GTGAA TTTTATTTCTTACTG TERM 10 5885 - 5903 + g 77 -7.4 -4.31065 | opp_overlap 5884 5886, overlap 5880 5886 AACTCCTCTACTAAT AGGTGAAG TTT CTTCACCA TTTAATTTTGTATCT TERM 11 5886 - 5902 + g 85 -10.9 -3.17012 | opp_overlap 5886 5884, overlap 5885 5880 ACTCCTCTACTAATA GGTGAAG TTT CTTCACC ATTTAATTTTGTATC TERM 12 5902 - 5886 - G 85 -10.9 -3.13522 | opp_overlap 5885 5880 5886, overlap 5884 ACTCCTCTACTAATA GGTGAAG TTT CTTCACC ATTTAATTTTGTATC TERM 13 6493 - 6520 + g 90 -3.6 -6.17669 | overlap 6491 6489 TTTGATTGTTTTGTT TCATTGAAATAT CCTT ATATTTTTATGA TTTTTTTATTTTATT TERM 14 6561 - 6573 + H 71 -4.9 -4.8622 | opp_overlap 6568 6572, overlap 6556 GGAATTTAAATAATT GATTA TAT TAATC TTTTTGATTAAAAAA TERM 15 6899 - 6887 - g 70 -4.1 -4.91084 | AAGAAAATTTAAAAA CAGCT CTT AGCTA TATACTCTTAGGAGC TERM 16 7955 - 7975 + G 70 -5.5 -4.23723 | TACCAACTTTTATTT TCTATAATG GCC CATTATTGA TTTTAGGTAGTATTA C8J_0006 6706 - 8007 + | Na+/H+ antiporter family protein TERM 17 8866 - 8848 - g 78 -9.6 -3.13403 | overlap 8846 GCTTTTCGACTAATA CCTTCCCA AGT TGGGAAAG AGCCCATCCAAACCG TERM 18 9938 - 9928 - g 78 -4 -5.44721 | ATTATTCTAAAAAAA CTTT AGA AAAG GCTTTAGATGAACTT TERM 19 11019 - 11046 + G 73 -9.2 -2.64416 | opp_overlap 11019, overlap 11010 11018 TTAATGGGCTTTAAA GTCTATCCTTGG ATAG CTAAGGCTAGAC ATTCTACTGCAGGTG TERM 20 12533 - 12519 - g 86 -7.2 -5.28826 | AAATTCGATAAAAAA GACTTT TTT AAAGTC ATGCCAAGAGATTAT gltB 8142 - 12632 + | glutamate synthase, large subunit TERM 21 13039 - 13023 - g 77 -4.5 -5.31275 | TGTGAGTATAAAAAA TAATGAA TTA TCCATTA TAGAAAATGCTTTTA gltD 12643 - 14088 + | glutamate synthase subunit beta rnhB 14664 - 14089 - | ribonuclease HII TERM 22 14697 - 14678 - R 76 -6.4 -4.58685 | opp_overlap 14681, overlap 14681 AAATTTTTCTAAAAA GAAGGGCA AAAA TGCCCTTT TATTCTACTGTGATA TERM 23 14681 - 14694 + r 89 -8.1 -4.82819 | opp_overlap 14681 14678 TTTTTCTAAAAAGAA GGGCA AAAA TGCCC TTTTATTCTACTGTG TERM 24 14694 - 14681 - R 83 -8.1 -4.40561 | opp_overlap 14681, overlap 14678 TTTTTCTAAAAAGAA GGGCA AAAA TGCCC TTTTATTCTACTGTG C8J_0010 14936 - 14697 - | competence protein ComEA C8J_0011 15648 - 15001 - | rubrerythrin TERM 25 17414 - 17404 - g 70 -5.4 -4.57569 | overlap 17409 GTATTGCCTCAAAAA GAAG TGC CTTC AAGATGGCTTAGAAT ilvD 15808 - 17484 + | dihydroxy-acid dehydratase TERM 26 17479 - 17501 + T 100 -13.6 -4.03815 | opp_overlap 17482, overlap 17475 17482 GCGGTTTTGGATATG GAATGAAAGG AAA CCTTTCATTC TTCTATTTCTTTAGT TERM 27 17498 - 17482 - T 78 -9.5 -3.12351 | opp_overlap 17479 17475 17482 GTTTTGGATATGGAA TGAAAGG AAA CCTTTCA TTCTTCTATTTCTTT TERM 28 17482 - 17498 + T 87 -9.5 -4.10632 | opp_overlap 17482, overlap 17479 17475 GTTTTGGATATGGAA TGAAAGG AAA CCTTTCA TTCTTCTATTTCTTT C8J_0013 18020 - 17496 - | putative integral membrane protein C8J_0014 19338 - 18112 - | hypothetical protein C8J_0015 19415 - 20089 + | putative transcriptional regulatory protein TERM 29 20107 - 20078 - T 93 -10.9 -4.01786 | opp_overlap 20077 20076 20074 20073, overlap 20080 AAAGATAAGATTAAA TATAAGTCCTAGT TTTC ACTAGGACTTAAA GCTTAGTTTAGAGTA TERM 30 20105 - 20080 - T 100 -13.5 -3.57873 | opp_overlap 20077 20076 20074 20073, overlap 20078 AGATAAGATTAAATA TAAGTCCTAGT TTTC ACTAGGACTTA AAGCTTAGTTTAGAG C8J_0016 21636 - 20110 - | disulfide bond formation protein, DsbB family TERM 31 20194 - 20184 - G 74 -5.4 -4.87803 | opp_overlap 20184 CATCTTTAAAGAAAA TGCT TCT AGCA TTAGTGATAGAGCTT TERM 32 20262 - 20272 + g 72 -5.4 -4.7497 | opp_overlap 20262, overlap 20259 GATCAATTACAGCAA TCAC ATT GTGA TTTTTACTAAGTGCA TERM 33 20631 - 20650 + g 72 -8 -3.54424 | opp_overlap 20635, overlap 20635 CATTAGGATTTTTTG CAAATCTT AAGA AAGATTTG TTTGAACCCATAAGA C8J_0017 21815 - 21648 - | hypothetical protein TERM 34 21916 - 21889 - R 100 -13 -4.25848 | AATTTTTTATTAAAA TTTCGTGTTAAT TTAA ATTAACACGAAA AAAGTTACTGAAAGC C8J_0018 23699 - 21921 - | MCP domain-containing signal transducer TERM 35 22353 - 22371 + g 76 -8.9 -3.53811 | ATGTTCGCCCGCTCT TGCAGCT TCAAT AGCTGCA TTTAGGGCAAGTAGA TERM 36 23238 - 23265 + g 76 -2.9 -5.5454 | gap 1, opp_overlap 23243 23245, overlap 23243 AGTTGAAAGAACGCT TAAC-ATAGAAC TCATT GTTCTATAGTTG TTTTTATTTGTTTCA C8J_0019 24603 - 23689 - | cytochrome C551 peroxidase C8J_0020 25565 - 24699 - | fumarylacetoacetate hydrolase family protein C8J_0021 26522 - 25677 - | putative ribosomal pseudouridine synthase purB 26657 - 27985 + | adenylosuccinate lyase TERM 37 28984 - 28994 + G 72 -5.4 -4.82901 | opp_overlap 28993 TTTCCCTGCTTTATG GATC AAT GATC TTTTTATGAAAAGAG nrdA 28001 - 30370 + | ribonucleotide-diphosphate reductase subunit alpha TERM 38 30406 - 30372 - T 87 -9.5 -4.15788 | opp_overlap 30380, overlap 30374 30375 30380 AAGGTTGCCAATAAA TACTAAAACCCAATG AAAAG CATTGGGTTTTAAAA GATTAAGAATTGTAA TERM 39 30404 - 30374 - T 95 -12.1 -3.6761 | opp_overlap 30380, overlap 30372 30375 30380 GGTTGCCAATAAATA CTAAAACCCAATG AAAAG CATTGGGTTTTAA AAGATTAAGAATTGT TERM 40 30403 - 30375 - T 100 -13.4 -2.80244 | opp_overlap 30380, overlap 30374 30372 30380 GTTGCCAATAAATAC TAAAACCCAATG AAAAG CATTGGGTTTTA AAAGATTAAGAATTG TERM 41 30380 - 30398 + T 84 -8.9 -4.11484 | opp_overlap 30375 30374 30372 30380 CAATAAATACTAAAA CCCAATG AAAAG CATTGGG TTTTAAAAGATTAAG TERM 42 30398 - 30380 - T 91 -8.9 -4.55446 | opp_overlap 30380, overlap 30375 30374 30372 CAATAAATACTAAAA CCCAATG AAAAG CATTGGG TTTTAAAAGATTAAG C8J_0024 31794 - 30409 - | sodium/dicarboxylate symporter C8J_0025 32537 - 31914 - | FAD-dependent thymidylate synthase TERM 43 33793 - 33779 - g 75 -4.3 -5.26907 | opp_overlap 33779 CAAGAGAAAATAAAA TTCCT TTTTT AGGAA TTTGTTTGGGTATGC pyrG 32656 - 34287 + | CTP synthetase TERM 44 34640 - 34620 - g 72 -8.3 -3.27164 | overlap 34622 CAGTAGATAATGGAA TAGCTGCTC TTG AAGCAGCCA AACTCTGCAAAGAAA TERM 45 34638 - 34622 - g 73 -8.7 -3.19511 | overlap 34620 GTAGATAATGGAATA GCTGCTC TTG AAGCAGC CAAACTCTGCAAAGA TERM 46 35123 - 35105 - g 70 -6 -4.21351 | overlap 35088 AAAGATTTTAATAAA GCTTTAGA ATA TCTAGAGC AAATTGTTAGTTTTA recJ 34274 - 35845 + | single-stranded-DNA-specific exonuclease RecJ TERM 47 35856 - 35838 - f 74 -6.2 -4.49556 | opp_overlap 35838, overlap 35852 TTGTTATTAAAGAAA TTTTATAA AAT TTATAAAA TTTTTATTTATTATT TERM 48 35838 - 35856 + F 100 -6.2 -5.52807 | opp_overlap 35838 35852 TTGTTATTAAAGAAA TTTTATAA AAT TTATAAAA TTTTTATTTATTATT TERM 49 36052 - 36066 + G 70 -8.6 -2.58544 | overlap 36051 GTTCTATTGATAGTG CTGTTG CCA CAACAG GTTATACAGCTGGGG TERM 50 36633 - 36616 - g 70 -8.5 -3.05384 | CTCCTTTTGATGTAA GCAAACT CACA AGTTTGC CAAAAGTAGATATTC ansA 35982 - 36977 + | L-asparaginase TERM 51 37021 - 36998 - f 87 -10.4 -3.62518 | opp_overlap 36993 36992 TTAAATATTTCTAAA CTTAGGGAAA TTAT CTTCCCTAAG TCAAGCCTTTTAATC TERM 52 37272 - 37302 + F 72 -3.4 -5.30686 | opp_overlap 37296, overlap 37273 ATTTTATAAATTAAC TCTTTTGGTTTTTA TCT TATAAACTAAAAGC TTTTTTATAAATCTT TERM 53 37519 - 37497 - f 72 -4.3 -4.99435 | opp_overlap 37497 TCTAATAATGAAAAA GATTAAAAA CTTTT CTTTTAATC TTTCATAACTTTTTC TERM 54 37547 - 37528 - f 72 -8 -3.31322 | TTTAATCTTTCATAA CTTTTTCT TTGA AGAAAAAG ATTAAACTATCTATA TERM 55 37584 - 37547 - f 72 -4.3 -5.06414 | opp_overlap 37554 TTCTTTGAAGAAAAA GATTAAACTATCTATAA TTTT TTATGGAGAGTTTGATC CTGGCTCAGAGTGAA TERM 56 37641 - 37658 + F 70 -8.5 -2.56596 | opp_overlap 37640 37641 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 57 37658 - 37641 - f 70 -8.5 -2.56343 | opp_overlap 37641, overlap 37640 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 58 39046 - 39063 + F 74 -9.1 -3.07291 | opp_overlap 39046 GTCGTAACAAGGTAA CCGTAGG AGAA CCTGCGG TTGGATCACCTCCTT TERM 59 39381 - 39365 - f 90 -5.9 -5.46657 | GATTTGAATAAAAAA GCTTTAA AAT CTAAAGC AAGTATATAAAGTAG TERM 60 39534 - 39554 + F 78 -6.9 -4.56187 | overlap 39536 TAATATATATACTTC CTTTAGGTT TTA AACCTAATG TTCTTTTTAATTATC TERM 61 39536 - 39552 + F 79 -8.1 -3.86437 | overlap 39534 ATATATATACTTCCT TTAGGTT TTA AACCTAA TGTTCTTTTTAATTA TERM 62 40151 - 40134 - f 91 -11.3 -3.66803 | opp_overlap 40133 40132, overlap 40127 GCGCAAGAGGGCAAA CCCAGTG CTTG CACTGGG GGTTGTAGGACTGCA TERM 63 42843 - 42853 + F 70 -5.4 -4.57341 | AATAAAGCATCACTT CCTT GTT AAGG TTTTTAAGAAGACTT C8J_0029 43640 - 45610 + | hypothetical protein TERM 64 45615 - 45635 + F 79 -9 -3.5594 | opp_overlap 45615 45614, overlap 45616 TTTTAAAATAAAATT TTCGCCCA TTTTT TGGGCGAG TTTAAGGAGTAAATT TERM 65 45616 - 45634 + F 78 -10.3 -2.73243 | opp_overlap 45615 45614, overlap 45615 TTTAAAATAAAATTT TCGCCCA TTTTT TGGGCGA GTTTAAGGAGTAAAT C8J_0030 45651 - 47720 + | hypothetical protein TERM 66 47749 - 47718 - f 95 -11.2 -4.2828 | gap 1, opp_overlap 47709 47724, overlap 47724 GTGGATTTATTAAAA TAATAATTGCCTAGA TTT TCTAGGCAATT-TTA AATGAAAGGATTTGA TERM 67 47744 - 47724 - f 100 -12.7 -4.24149 | opp_overlap 47724, overlap 47718 TTATTAAAATAATAA TTGCCTAGA TTT TCTAGGCAA TTTTAAATGAAAGGA TERM 68 47724 - 47744 + F 100 -12.7 -4.18018 | opp_overlap 47718 47724 TTATTAAAATAATAA TTGCCTAGA TTT TCTAGGCAA TTTTAAATGAAAGGA C8J_0031 47764 - 48348 + | hypothetical protein TERM 69 48333 - 48364 + F 74 -6.8 -4.20932 | opp_overlap 48333 TTTTCTAGCATACAA GGAAAAAAATGTTT AAGA AAATCTTTTTTTCC TTTTGGATGAGTCTT TERM 70 48951 - 48977 + G 73 -6 -4.62336 | ACAACAATGAAAATG TTTTACCTTTTA GAT TAGGAGGTGAAA TTTTTGCACTCAACT C8J_0032 48341 - 51046 + | hypothetical protein TERM 71 51073 - 51048 - T 100 -13.5 -3.8709 | AAAGTCCTGCATAAA TTTACCCTTGA AATT TCAAGGGTAAA TAAGAAGTTAGAATT C8J_0033 52751 - 51081 - | hypothetical protein TERM 72 51591 - 51611 + g 93 -10.5 -3.89956 | opp_overlap 51596 CGCATTGATCGTATA GGTAATGCT TAC AGCATTGCC TTTGCTATCTAGTAC TERM 73 51849 - 51870 + g 70 -5.3 -4.67943 | gap 1 CATTATGTGTAAAGT TTTAGAGCTT GCA AAGC-CTAAA TTTTCTATATTGGCA TERM 74 53561 - 53575 + G 70 -4.2 -4.94992 | TTTTAAATGGCGATA GCACTT TAA AAGGGC TTTTTGTGGATTTAA TERM 75 53973 - 53952 - g 85 -7.5 -4.94902 | opp_overlap 53945 53952, overlap 53959 TAATGATGATAAAAA TTTGAAATT TTTA AATTTCAAA AAAATCCCTGATTTT TERM 76 54308 - 54295 - g 72 -5.3 -4.74504 | ATTTTAAGCCAAAAA GAACT CATA AGTTC AAGTGTTTTAGGAAA TERM 77 55063 - 55042 - g 81 -8.1 -4.15881 | AAAGACTATAAAGAA GGCTTTTAC ACAG ATAAAAGCC ACATCAACCAAGAGA TERM 78 55123 - 55107 - g 70 -5.1 -4.57341 | opp_overlap 55107 55109, overlap 55109 AATTTCTTTTAAAAA TTTCTGC TTT GCAGATA AATTTAAAAAAGAAA C8J_0034 52981 - 56685 + | type II restriction-modification enzyme TERM 79 58144 - 58128 - g 71 -2.3 -5.34365 | overlap 58138 TTATAATAATAAAAA TAATAAC AAA GATATTA ATAAAAATATCAAAA TERM 80 59096 - 59083 - g 71 -3.1 -5.27206 | opp_overlap 59083 GATAGACAATAAAAA CAACA ATAG CGTTG TATCTGCTCAACTTA TERM 81 59201 - 59213 + G 71 -4.8 -4.72272 | GAAAAACTATCACCT GAGC AAATG GCTC TTTTTGATCAAAAAG C8J_0035 56687 - 59428 + | hypothetical protein TERM 82 59635 - 59655 + G 88 -4.1 -5.82281 | opp_overlap 59635 TGAAATTTTAGAAAT TTATTTTTC TAA GACAAATAA TTTTTTTATATATTT TERM 83 60049 - 60059 + G 75 -4 -5.31275 | opp_overlap 60028 60025 TATTGAAAATAATTT TAGT GAA ACTA TTTTTTATAATAAAA C8J_0036 59450 - 61147 + | hypothetical protein C8J_0037 61878 - 61177 - | hypothetical protein TERM 84 61859 - 61842 - G 70 -6.3 -4.12942 | overlap 61843 TCAAACTTGCTAAAA CTATGGC TAAA GCCATAA AGATATTATTTGTTT C8J_0038 63077 - 61875 - | Bcr/CflA subfamily drug resistance transporter TERM 85 63404 - 63393 - g 71 -2.2 -5.35721 | ATAGAACAAGAAAAA CTCA TAAA CGAG CAAGTAAGCCAAAAG C8J_0039 63180 - 64529 + | hypothetical protein TERM 86 64560 - 64518 - T 95 -12.2 -3.71148 | opp_overlap 64523 64524 64526, overlap 64523 GAAAATTTAGCCAAA GATGAGGATTAATTTTGGGC TAA GCCCAAAATTAATCATTCTC CTGGGAAGTGATTTG TERM 87 64555 - 64523 - T 100 -15.1 -2.86124 | opp_overlap 64523 64524 64526, overlap 64518 TTTAGCCAAAGATGA GGATTAATTTTGGGC TAA GCCCAAAATTAATCA TTCTCCTGGGAAGTG TERM 88 64523 - 64555 + T 100 -15.1 -3.4072 | opp_overlap 64523 64518, overlap 64524 64526 TTTAGCCAAAGATGA GGATTAATTTTGGGC TAA GCCCAAAATTAATCA TTCTCCTGGGAAGTG TERM 89 64524 - 64554 + T 100 -18.6 -2.64218 | opp_overlap 64523 64518, overlap 64523 64526 TTAGCCAAAGATGAG GATTAATTTTGGGC TAA GCCCAAAATTAATC ATTCTCCTGGGAAGT TERM 90 64526 - 64552 + T 100 -15.4 -2.86271 | opp_overlap 64523 64518, overlap 64524 64523 AGCCAAAGATGAGGA TTAATTTTGGGC TAA GCCCAAAATTAA TCATTCTCCTGGGAA C8J_0040 65596 - 64553 - | cytochrome c family protein C8J_0041 66421 - 65774 - | hypothetical protein TERM 91 66349 - 66376 + g 86 -10 -3.74077 | opp_overlap 66349 66350, overlap 66350 GTAAGGCTTCGATAA TGCTTAGGAATT TTAA GATTCCTAAGCG TTTAAGTATATAAAG TERM 92 66350 - 66375 + g 85 -11.3 -2.84125 | opp_overlap 66349 66350, overlap 66349 TAAGGCTTCGATAAT GCTTAGGAATT TTAA GATTCCTAAGC GTTTAAGTATATAAA TERM 93 66375 - 66350 - G 78 -10.6 -2.57881 | opp_overlap 66350 66349, overlap 66349 TAAGGCTTCGATAAT GCTTAGGAAT TTTAAG ATTCCTAAGC GTTTAAGTATATAAA typA 68229 - 66421 - | GTP-binding protein TypA TERM 94 66598 - 66613 + g 70 -6.2 -4.17002 | overlap 66607 ATCGCTTCCACTTGC TCTTAC ATTG GTAAGA TTCTTTCCTTTGATA TERM 95 68443 - 68429 - g 90 -7.2 -5.37043 | opp_overlap 68428 AGCTGAGAGAAAAAA TGAAGT TTT ACTTCA AGTTTTAGAACTTTT TERM 96 68565 - 68551 - g 71 -2.2 -5.35222 | AAAATTTAGAAAAAA TTTTAA ATG CTAAAA ATTTAGAAGAGCTTT C8J_0043 68364 - 68687 + | hypothetical protein TERM 97 69941 - 69923 - g 78 -6.2 -4.72272 | TTCTTTGATCAAAAA TTAAATTT TGA AAATTTAA ATAAAACTCAAGTAG C8J_0044 68708 - 70525 + | hypothetical protein flgD 70579 - 71463 + | flagellar basal body rod modification protein TERM 98 72725 - 72711 - g 72 -2.8 -5.40474 | AGGCGTCGAAAAAAA TGTAGT TAC ACAACA AGATGGTGTAGCTGA flgE 71467 - 73104 + | flagellar hook protein TERM 99 73092 - 73127 + T 75 -8.6 -3.34716 | opp_overlap 73095 73100, overlap 73100 ACAAAAAGCCATTAA TATGAAAAGATAATTC TTAG GAATTATCTTTTTCTA ATTTTTCAAAAATAA TERM 100 73100 - 73119 + T 100 -8 -5.1286 | opp_overlap 73095 73100, overlap 73092 CCATTAATATGAAAA GATAATTC TTAG GAATTATC TTTTTCTAATTTTTC TERM 101 73119 - 73100 - T 83 -8 -4.44797 | opp_overlap 73100 73092, overlap 73095 CCATTAATATGAAAA GATAATTC TTAG GAATTATC TTTTTCTAATTTTTC C8J_0047 74979 - 73108 - | hypothetical protein C8J_0048 75699 - 74980 - | hypothetical protein TERM 102 75710 - 75736 + r 81 -7.5 -4.58395 | overlap 75712 TTCATATTTTTTCCT TGCGATATAAA TTATT TTTATATCGTA TTTTTAGAGAATAAA TERM 103 75712 - 75734 + r 79 -7.9 -3.90762 | overlap 75710 CATATTTTTTCCTTG CGATATAAA TTATT TTTATATCG TATTTTTAGAGAATA TERM 104 76879 - 76897 + r 86 -7.4 -4.85653 | TTTATTACAGCTACA GCTCCAAA TCC TTTGGTGC TTTATTTTCTCTCTC TERM 105 77481 - 77495 + r 71 -5.7 -4.40561 | opp_overlap 77481 77483, overlap 77478 TAACTCACTATGCAA CAGGA ACAGC TCCTG TTATTTTTGGAACGG TERM 106 77624 - 77653 + r 100 -13.9 -3.48395 | opp_overlap 77624 77627 77651, overlap 77627 TTAGGATTTTATTAA TAATTTCTAGGAA TTAA TTCCTAGAAATTA TTCTATAAAACCGCT TERM 107 77653 - 77624 - R 100 -13.9 -3.17212 | opp_overlap 77624 77627, overlap 77627 77651 TTAGGATTTTATTAA TAATTTCTAGGAA TTAA TTCCTAGAAATTA TTCTATAAAACCGCT TERM 108 77627 - 77650 + r 95 -11.2 -3.88232 | opp_overlap 77624 77627, overlap 77624 GGATTTTATTAATAA TTTCTAGGAA TTAA TTCCTAGAAA TTATTCTATAAAACC TERM 109 77650 - 77627 - R 91 -11.2 -3.7282 | opp_overlap 77627 77624, overlap 77624 GGATTTTATTAATAA TTTCTAGGAA TTAA TTCCTAGAAA TTATTCTATAAAACC trmU 78667 - 77651 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 110 78499 - 78517 + g 75 -4.6 -5.14894 | opp_overlap 78499 78500, overlap 78500 78501 78503 AAATATGATAAGGAA TTTGCAAA AAG TTTGCAAC TTTTTCTACTTTTTT TERM 111 78500 - 78516 + g 74 -8.1 -3.65276 | opp_overlap 78499 78500, overlap 78499 78501 78503 AATATGATAAGGAAT TTGCAAA AAG TTTGCAA CTTTTTCTACTTTTT C8J_0051 79272 - 78667 - | lysine decarboxylase family protein TERM 112 79124 - 79148 + g 72 -6.6 -4.15833 | gap 1, opp_overlap 79115 79124 79122 ATCACACAAAAACCA TTTTGAGCACA TTTT TGTGC-CAAAA TTTTAGCCTGCTGAT fliY 80183 - 79341 - | flagellar motor switch protein FliY fliM 81259 - 80180 - | flagellar motor switch protein FliM fliA 81951 - 81259 - | flagellar biosynthesis sigma factor C8J_0055 82288 - 81932 - | hypothetical protein C8J_0056 83173 - 82307 - | ATPase, ParA family flhF 84620 - 83166 - | flagellar biosynthesis regulator FlhF TERM 113 84410 - 84428 + g 74 -2.4 -5.52909 | GCGAGCTTTTTTTTG CAGGTAAA GAT TTTCCTTG TTTTTTTAAGTGTTC folK 85103 - 84630 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 114 84747 - 84759 + g 73 -5.5 -4.63542 | opp_overlap 84747 AAGATCTAAATCAAG CGTTC TAG GAGCG TTTTTGAAAGTTCTC TERM 115 85088 - 85054 - G 85 -4.5 -5.52384 | gap 1, opp_overlap 85066 85071, overlap 85055 TTTTGACTAAAAAAA GGAAAAAAACGACTTT TTTC AAAGT-GTTTTACTCC TTGAATTTTTAGCAT aroQ 85585 - 85106 - | 3-dehydroquinate dehydratase TERM 116 86190 - 86159 - g 74 -3.2 -5.47159 | opp_overlap 86162 86165, overlap 86162 GTTGAAGATAAAAAA CAAGAATTTTTAAA AAGA TTTGAAAATTCTTT GAAATTTAAAAATGA TERM 117 86187 - 86162 - g 71 -4.9 -4.80737 | opp_overlap 86162 86165, overlap 86159 GAAGATAAAAAACAA GAATTTTTAAA AAGA TTTGAAAATTC TTTGAAATTTAAAAA TERM 118 86162 - 86187 + G 71 -7.1 -3.71649 | opp_overlap 86162 86159, overlap 86165 GAAGATAAAAAACAA GAATTTTTAAA AAGA TTTGAAAATTC TTTGAAATTTAAAAA C8J_0060 85676 - 86905 + | chlorohydrolase sppA 86893 - 87789 + | signal peptide peptidase SppA, 36K type C8J_0062 87868 - 88899 + | hypothetical protein TERM 119 88910 - 88943 + T 81 -5.5 -5.25799 | overlap 88913 CTTAGTCTTTAAGTT TAATGTCCATTTT ATTATTGC AAAATGGACATTC TTTTTCTATTGTTTT TERM 120 88913 - 88940 + T 81 -7.2 -4.65219 | overlap 88910 AGTCTTTAAGTTTAA TGTCCATTTT ATTATTGC AAAATGGACA TTCTTTTTCTATTGT C8J_0063 89081 - 88896 - | hypothetical protein C8J_0064 89750 - 89142 - | hypothetical protein C8J_0065 90400 - 89753 - | hypothetical protein TERM 121 90592 - 90552 - R 93 -9.3 -4.90136 | opp_overlap 90552, overlap 90545 90556 90558 90559 AATTAATATTAAAAA TTAAGACTTACTGATTCTA GTA TAGAATCAGTAAATAATAA TATGTGCAATTTGTG TERM 122 90588 - 90556 - R 88 -10.1 -3.87412 | opp_overlap 90552, overlap 90552 90558 90559 AATATTAAAAATTAA GACTTACTGATTCTA GTA TAGAATCAGTAAATA ATAATATGTGCAATT TERM 123 90586 - 90558 - R 100 -12.7 -3.50111 | opp_overlap 90552, overlap 90556 90552 90559 TATTAAAAATTAAGA CTTACTGATTCTA GTA TAGAATCAGTAAA TAATAATATGTGCAA TERM 124 90585 - 90559 - R 100 -14 -2.68982 | opp_overlap 90552, overlap 90558 90556 90552 ATTAAAAATTAAGAC TTACTGATTCTA GTA TAGAATCAGTAA ATAATAATATGTGCA C8J_0066 91235 - 90579 - | hypothetical protein C8J_0067 92667 - 91228 - | iron-sulfur cluster binding protein TERM 125 91395 - 91414 + g 72 -5 -4.8384 | GTGAAAAACGCCATT TATCGCCA TTGG TTGCGATA TTTTTAAATTGTTTA TERM 126 92544 - 92566 + g 74 -2 -5.626 | overlap 92549 GCCAGTCTTTAAATC TAGCATCAAT AAC ATTGAGTCTA TTTTTTTGTAAAGTA C8J_0068 93401 - 92664 - | hypothetical protein TERM 127 93506 - 93468 - R 78 -7 -4.65819 | overlap 93469 93494 AAAAGCAAAGTAAAA TTTCCAACAAATATTC TAAAAAC GAATATTTGTTGAAAT AAAACTTAAATTTTT TERM 128 93505 - 93469 - R 86 -10.5 -3.37051 | overlap 93468 93494 AAAGCAAAGTAAAAT TTCCAACAAATATTC TAAAAAC GAATATTTGTTGAAA TAAAACTTAAATTTT lctP 95206 - 93524 - | L-lactate permease TERM 129 94382 - 94396 + g 75 -7.2 -4.13282 | opp_overlap 94371 94381, overlap 94371 AAATCTAAAAATATT TTTTGG TTT CCAAAA TTTTAAAAATATAGT TERM 130 95050 - 95037 - G 76 -6.7 -4.48299 | TTATAGGCAAATAAA GCTAC CAAA GTAGC AAGTATAACAGTTAA TERM 131 95385 - 95360 - R 100 -8.5 -5.30448 | AAATAAATATAAAAA TAGAACAAGAT AAAA ATCTTATTCTA AAGGGGTAGCAGCTG cdtC 95947 - 95378 - | cytolethal distending toxin cdtB 96755 - 95958 - | cytolethal distending toxin, type I deoxyribonuclease-like protein cdtA 97558 - 96752 - | cytolethal distending toxin TERM 132 97630 - 97642 + H 76 -3.5 -5.51353 | TAATTTTTCGCTTTT TAAAA ATG TTTTA TTTTTGTTGTTTTTA TERM 133 97876 - 97865 - g 80 -2.2 -5.72622 | overlap 97868 97869 GCGACAAAGAAAAAA GCAC TTTT GTAC TCAAAAATCTTACAC C8J_0073 97672 - 97905 + | hypothetical protein cydA 97906 - 99468 + | cytochrome d ubiquinol oxidase, subunit I cydB 99468 - 100592 + | cytochrome d ubiquinol oxidase, subunit II C8J_0076 100602 - 100706 + | hypothetical protein C8J_0077 101481 - 100786 - | putative amino acid recemase TERM 134 100839 - 100855 + g 74 -6.7 -4.23207 | overlap 100851 CGTGAATAAGGCTTG TATCAAA AAT TTTGATA TTTGTATCATTTTTG ung 102296 - 101601 - | uracil-DNA glycosylase TERM 135 101929 - 101907 - G 72 -8.5 -3.30821 | AAGAATAGAATTTAA GAGCAAAAC TCCTT GTTTTGCCC AAGAGCTTAAATCTC TERM 136 103129 - 103117 - g 77 -7.7 -4.09511 | AAGATGTTCTTAAAA TGGGT AGA ACCCA ACTGCAAGATGCTGT TERM 137 103938 - 103915 - g 70 -5.4 -4.62669 | TAAGTAAAGAACAAA TTGATGAAAT TTTA ACTCCATCAA ATATGCTAAATCCTC aspA 102567 - 103973 + | aspartate ammonia-lyase TERM 138 104018 - 104035 + G 77 -5.5 -4.91459 | opp_overlap 104018 TAATTTTGCAAGTAA TCGTCCT TCTT GGGGCGA TTTTTATCGGTATTC TERM 139 104179 - 104159 - g 76 -9.8 -2.73483 | opp_overlap 104159 ATGTTATTTTAATTA TTGCTGCA GCTAT TGCAGCAA TTTCTGCTATGCAAC TERM 140 104159 - 104179 + G 93 -10.5 -4.0162 | opp_overlap 104159 ATGTTATTTTAATTA TTGCTGCAG CTA TTGCAGCAA TTTCTGCTATGCAAC TERM 141 104993 - 105007 + G 77 -8.6 -3.54768 | opp_overlap 104968 104966 104992 104990 GGGTTAAACAAACCC CTGCTA TGT TAGCAG TTGCATTTTTCTTTG C8J_0081 103990 - 105327 + | anaerobic C4-dicarboxylate transporter TERM 142 105356 - 105334 - f 70 -6.3 -4.08485 | opp_overlap 105329 CTTATTTAAATCAAA CCCTAGG TTTTTCTCT CCTAGGG TTAAAATTTTTTCAT C8J_0082 105435 - 106796 + | putative lipoprotein C8J_0083 106806 - 107174 + | putative lipoprotein C8J_0084 107198 - 107821 + | putative lipoprotein TERM 143 107853 - 107873 + F 100 -7.6 -5.77632 | TGAATAAAATTTTTA GCTCAAGT GTTTA GCTTGAGC TTTTTTTATGATTTT C8J_0085 107903 - 109240 + | putative periplasmic protein TERM 144 109273 - 109296 + G 73 -9 -3.17229 | overlap 109274 AATTAAAATTCTTTT TTTAGGCTTA TTTT TAAGCCTAAG TCTTAATGCTAAAGT TERM 145 109274 - 109295 + G 78 -10.3 -2.50016 | overlap 109273 ATTAAAATTCTTTTT TTAGGCTTA TTTT TAAGCCTAA GTCTTAATGCTAAAG C8J_0086 109250 - 110452 + | putative periplasmic protein TERM 146 110456 - 110485 + F 86 -11 -3.12773 | opp_overlap 110455 110454, overlap 110454 CTGGGATTTTAAATT TTTAGAGTTTGA TTTTTC TCAAACTCTAAA TCCTTTCTTAAATTC rplU 110611 - 110919 + | 50S ribosomal protein L21 rpmA 110930 - 111184 + | 50S ribosomal protein L27 TERM 147 111185 - 111217 + F 100 -12.2 -3.89617 | opp_overlap 111185, overlap 111178 GTATACCCTGCATAA GTTTTTAGGACGCT TTTTT AGCGTCTTGAAAAC TTTAAATTTATAAAT TERM 148 111217 - 111185 - f 72 -7.8 -3.30771 | opp_overlap 111185 111178 GTATACCCTGCATAA GTTTTTAGGACGCT TTTTT AGCGTCTTGAAAAC TTTAAATTTATAAAT TERM 149 111782 - 111810 + G 80 -9.7 -3.23715 | opp_overlap 111797, overlap 111780 GCCGATGTAGGGCTT GTAGGTTTTCCAA ATG TAGGAAAATCTAC TCTTATAAGCGTTGT C8J_0089 111293 - 112330 + | GTPase ObgE TERM 150 112345 - 112383 + F 90 -7.6 -5.0133 | opp_overlap 112344 112335 112347 112351 AAAATTTTAACAATC TAGGAAGTGTTTTATATT AAA AATTTCAAACACTCCCTA TTTTTTCAAAAAATA TERM 151 112890 - 112904 + G 76 -2.8 -5.52384 | opp_overlap 112881 TAATGATAGCTTAAG TGCTTA TGC TACGCA TTTTTTTGATGCGGA proB 112453 - 113208 + | gamma-glutamyl kinase fmt 113282 - 114199 + | methionyl-tRNA formyltransferase C8J_0092 114180 - 114815 + | biotin--protein ligase C8J_0093 114812 - 115597 + | chromosome partitioning protein, ParA family C8J_0094 115603 - 116439 + | chromosome partitioning protein, ParB family atpF' 116500 - 116925 + | F0F1 ATP synthase subunit B' TERM 152 117156 - 117146 - g 89 -4 -5.89947 | overlap 117135 GAAATTCAAAAAAAA CTTT TAG AAAG TAAAGCTAAGAAATT atpF 116936 - 117448 + | F0F1 ATP synthase subunit B TERM 153 117839 - 117829 - g 82 -4 -5.52096 | opp_overlap 117829, overlap 117822 AAACTTAACAAAAAA TTTG ATG CAAA TATTAAACTAAATAA atpH 117451 - 117972 + | F0F1 ATP synthase subunit delta atpA 117986 - 119491 + | F0F1 ATP synthase subunit alpha TERM 154 119549 - 119537 - g 80 -6.3 -4.88326 | AAAGAAAAATTAAAA GTGTT CAT AACAC TCAAAAGACTACAAA atpG 119500 - 120384 + | F0F1 ATP synthase subunit gamma atpD 120409 - 121806 + | F0F1 ATP synthase subunit beta TERM 155 122118 - 122103 - g 82 -4 -5.50499 | overlap 122105 TGAGATTGAAAAAAA TCTTGC TCAA GCAAAA GATTTGATTAAATCT atpC 121810 - 122199 + | F0F1 ATP synthase subunit epsilon exbB3 122199 - 122753 + | ExbB/TolQ family transport protein C8J_0103 122762 - 123151 + | TonB system transport protein ExbD, putative C8J_0104 123154 - 123933 + | TonB domain protein TERM 156 123969 - 123944 - g 88 -4.3 -5.67967 | gap 1, opp_overlap 123944 123945, overlap 123945 ATTAGGAGAAAAAAA TGAAAAAAATTG TAG CAATTTTTTT-A GTCTTTTTAGGAAGT C8J_0105 123943 - 125151 + | translocation protein TolB pal 125228 - 125725 + | peptidoglycan-associated lipoprotein Omp18 TERM 157 125747 - 125766 + G 83 -8.6 -4.13995 | opp_overlap 125743 125750 AAAAAAATATTCACA GTAGCTCT TCTT GGAGCTAC TTTACTTTATGCAGA TERM 158 126394 - 126373 - g 75 -5.9 -4.84761 | AGATGTTGATAAAAA TGCTTTTGA AGAT TCCAAAGCA AAATTAAATTTTCTC C8J_0107 125729 - 126676 + | hypothetical protein C8J_0108 126690 - 127259 + | FKBP-type peptidyl-prolyl cis-trans isomerase SlyD TERM 159 127767 - 127781 + GF 71 -8.6 -2.74799 | overlap 127766 127769 GACAAATCGTTGTAG CAGGTT TAA AACCTG ATTTAGCAAGTTATG fabD 127163 - 128179 + | malonyl CoA-acyl carrier protein transacylase pfs 128179 - 128865 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase C8J_0111 128862 - 129617 + | PP-loop family protein C8J_0112 129622 - 130143 + | hypothetical protein TERM 160 130624 - 130638 + G 71 -8.6 -2.82936 | overlap 130623 GGGCTTTTTTACCTT CGCATT CTC AATGCG CTTTAGGATTTGAGT C8J_0113 130143 - 130757 + | hypothetical protein C8J_0114 130754 - 131158 + | putative metalloprotease TERM 161 132497 - 132483 - g 83 -8.6 -4.15396 | GCTGAAATTAAACAA GCCATT GCC AATGGC TGGAAAGCAAAACCT C8J_0115 131244 - 132584 + | hypothetical protein dusB 133498 - 132581 - | tRNA-dihydrouridine synthase B TERM 162 133457 - 133437 - G 81 -8.3 -4.33675 | ACTACATTACGAAAA GGCAGATCT GAA AAACCTGCC ATAGGGGCTAAAAAT C8J_0117 134481 - 133495 - | hypothetical protein C8J_0118 134833 - 134471 - | dksA-like protein TERM 163 134806 - 134822 + g 89 -3.8 -6.07969 | CTTCTAAAATATTTT TGAAAT TTTGT ATTTCA TTTTTTTTCATTTTA C8J_0119 135294 - 134845 - | hypothetical protein accD 136138 - 135296 - | acetyl-CoA carboxylase subunit beta TERM 164 135844 - 135859 + g 71 -3.2 -5.28826 | overlap 135846 TACCTGTTTTACTTT CACCTT CGCT AAGGCG TTTTTTATAGGATTT C8J_0121 136869 - 136147 - | inositol monophosphatase family protein C8J_0122 139088 - 136869 - | OMP85 family outer membrane protein tyrA 139165 - 139992 + | prephenate dehydrogenase C8J_0124 140072 - 141445 + | peptidase, M23/M37 family lpxC 141445 - 142329 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase C8J_0126 142341 - 142769 + | hypothetical protein TERM 165 143523 - 143536 + G 91 -4.5 -5.96894 | TGAGCACACTTTCAG GTTCG GGAT CGAGC TTTTTTTCTTTAGCT TERM 166 143616 - 143586 - g 70 -4.1 -4.93877 | opp_overlap 143586 CTTTAGCAAAGAAAA TGCAAACAAAATT TAAAG ATTTTTGTGTGCA ATATTTAGAATTTGA thrB 142778 - 143656 + | homoserine kinase C8J_0128 143681 - 143938 + | hypothetical protein TERM 167 144036 - 144022 - g 88 -8.6 -4.41494 | GACTTGGAATTAAAA CAGCAT CAA ATGCTG TAGAACCTGAGATTG infB 143925 - 146540 + | translation initiation factor IF-2 TERM 168 146687 - 146701 + G 73 -3.6 -5.28683 | overlap 146689 TACGATGCTTTTGTG TATCTT GAT AAGATG TTTTTTAATGTTCAT C8J_0130 146537 - 146899 + | ribosome-binding factor A TERM 169 147199 - 147189 - g 88 -4 -5.67529 | AATGAAAAAGAAAAA TTTG AAG CAAA AATCATTGCTGTAGA C8J_0131 146889 - 147311 + | hypothetical protein C8J_0132 148306 - 147320 - | hypothetical protein C8J_0133 149258 - 148293 - | hypothetical protein TERM 170 148516 - 148534 + g 76 -9.6 -2.8779 | opp_overlap 148513 148516 CCATCTTTATAATAT CTAGCGCT AAT AGTGCTAG TATAATCTGAATTAT TERM 171 149015 - 148986 - G 71 -7.3 -3.84648 | gap 1 TCTAATATCATTAAA GCCTTTCCTA-TGC CCA GCAATAGAAAAAGC TTGACATGGAAATCC C8J_0134 149346 - 149789 + | hypothetical protein C8J_0135 150581 - 149778 - | cation ABC transporter, permease protein TERM 172 150307 - 150322 + g 74 -7.6 -3.71124 | opp_overlap 150307 AAAGCCCAAATTACA GCGATA ATAC TATCGC TTCTGTGTTCATAGT TERM 173 150492 - 150476 - G 78 -4.4 -5.38047 | CAGCCATAGAAAAAA GGCGAT TTATC ATCACC AAAGTACCTATGATC TERM 174 150593 - 150615 + r 86 -6.5 -5.20154 | overlap 150584 GCATTATTTTCCTTT GAAAATTTT AAACA AAAATTTTC TTTTTTAAATTCTGT C8J_0136 151428 - 150574 - | cation ABC transporter, ATP-binding protein TERM 175 151050 - 151062 + g 71 -4.9 -4.7629 | TTAGAGAATCAATTG TTTTG TTC CAAAA TTTTTCCATTCCTAC C8J_0137 152325 - 151441 - | cation ABC transporter, periplasmic cation-binding protein TERM 176 151629 - 151640 + g 72 -4.4 -5.04356 | GAGTGATAAGTTTTT GCAA ATCT TTGC TTTTTGGTTCTTTGC TERM 177 151801 - 151825 + g 74 -2.3 -5.54907 | TAATTCTGCTAAAAA TTTATCTAAAT TTT GTTTATATAAA TTTTTATTTTGTGGA TERM 178 153978 - 153963 - g 72 -6.2 -4.28049 | GTTAAAATGCTAAAA CAAAGT TCAG ACTTTG CTAATGCTTTAGCTA C8J_0138 152565 - 154544 + | methyl-accepting chemotaxis signal transduction protein TERM 179 154552 - 154580 + F 100 -12 -4.30448 | opp_overlap 154549 154552 GGTTTTAATTAATCA TTTATACCTAGT GAAAA ACTAGGTATAAA TTTTCCCTTCAATTT TERM 180 154580 - 154552 - f 88 -12 -2.84098 | opp_overlap 154552, overlap 154549 GGTTTTAATTAATCA TTTATACCTAGT GAAAA ACTAGGTATAAA TTTTCCCTTCAATTT C8J_0139 154679 - 156460 + | hypothetical protein TERM 181 156493 - 156456 - T 90 -11.6 -3.2794 | gap 1, opp_overlap 156460 156465, overlap 156461 156465 156490 GTGGAGTGATAGGAA GCTAATAAATTCCAAGC TTAAG GCTTGGAATTTACT-GC ATTAGCAATTACCAG TERM 182 156460 - 156490 + T 81 -10.6 -2.53911 | opp_overlap 156456 156461 156465, overlap 156465 AGTGATAGGAAGCTA ATAAATTCCAAGCT TAA GGCTTGGAATTTAC TGCATTAGCAATTAC TERM 183 156489 - 156461 - T 100 -13.4 -3.22521 | opp_overlap 156460 156465, overlap 156456 156465 GTGATAGGAAGCTAA TAAATTCCAAGC TTAAG GCTTGGAATTTA CTGCATTAGCAATTA TERM 184 156485 - 156465 - T 89 -9.8 -4.26351 | opp_overlap 156460 156465, overlap 156461 156456 TAGGAAGCTAATAAA TTCCAAGC TTAAG GCTTGGAA TTTACTGCATTAGCA TERM 185 156465 - 156485 + T 89 -10.5 -3.794 | opp_overlap 156465 156461 156456, overlap 156460 TAGGAAGCTAATAAA TTCCAAGCT TAA GGCTTGGAA TTTACTGCATTAGCA C8J_0140 157607 - 156495 - | hypothetical protein TERM 186 157609 - 157625 + r 85 -5.1 -5.32565 | opp_overlap 157611, overlap 157611 GAAGCAGGAACCATA CATGGAT GAT ATCCAAG TTTTTTCGTTGCTTC C8J_0141 158211 - 157642 - | hypothetical protein C8J_0142 158938 - 158222 - | hypothetical protein TERM 187 159169 - 159145 - R 70 -7.2 -3.61232 | overlap 159143 GTGTTGATATAAAGA TTTAGGCTAG GAATT CTAGCCTACA ATAAGAAAAAATCAA trxB 160119 - 159181 - | thioredoxin-disulfide reductase TERM 188 160246 - 160230 - R 82 -10.9 -2.63817 | opp_overlap 160230, overlap 160229 160227 AATTTTTAAGAAGAG GGCTAGT TAT ACTAGCC TTTAGTTTATAGTAA TERM 189 160230 - 160246 + r 93 -10.9 -4.16182 | opp_overlap 160230 160229 160227 AATTTTTAAGAAGAG GGCTAGT TAT ACTAGCC TTTAGTTTATAGTAA trx 160567 - 160253 - | thioredoxin C8J_0145 160962 - 160624 - | hypothetical protein hom 162209 - 160962 - | homoserine dehydrogenase C8J_0147 163415 - 162213 - | aspartate aminotransferase TERM 190 162710 - 162736 + g 76 -6.6 -4.49311 | overlap 162712 CCGCTACATCTTTTG CACCTTCAATTT CCA AAATAGAAGGAG TTTTATAGTCATCAT TERM 191 162949 - 162936 - G 70 -3.9 -5.07107 | opp_overlap 162928 CAAATTTTCAAAAAA TTGAT TTTC ATCAA GCTCAAATTTTTCAT C8J_0148 164233 - 163427 - | hypothetical protein C8J_0149 165165 - 164227 - | hypothetical protein C8J_0150 165841 - 165158 - | RNA methyltransferase, TrmH family TERM 192 165687 - 165724 + g 70 -5.9 -4.28049 | gap 1, opp_overlap 165699, overlap 165688 TTCGCATAAGCTTGA GCA-GTTTTAAAATCAAG TTT TTTGATTTTAAAACCTGA TTTTGCGATTTTGGA TERM 193 165688 - 165723 + g 76 -9.4 -3.16106 | gap 1, opp_overlap 165699, overlap 165687 TCGCATAAGCTTGAG CA-GTTTTAAAATCAAG TTT TTTGATTTTAAAACCTG ATTTTGCGATTTTGG C8J_0151 166679 - 165855 - | tetrapyrrole methylase family protein rpmE 166882 - 166682 - | 50S ribosomal protein L31 C8J_0153 167617 - 166961 - | hypothetical protein C8J_0154 168026 - 167619 - | hypothetical protein TERM 194 167764 - 167753 - G 70 -4.4 -4.88295 | AAACAAAGTGAAAAA TTGC TAAG GCAA AAATTAAGATCCAAG TERM 195 167904 - 167892 - G 74 -6.3 -4.42235 | overlap 167889 AATTGGTAAAAATAA TCGTA TTC TACGA ATAAAAATGAATTCG C8J_0155 168451 - 168026 - | cytochrome c family protein C8J_0156 169032 - 168451 - | hypothetical protein C8J_0157 169772 - 169029 - | radical SAM domain protein moaA 170737 - 169775 - | molybdenum cofactor biosynthesis protein A TERM 196 170343 - 170356 + g 74 -3.1 -5.34555 | AATACATCTTTTTGC GCAAG AGTT TTTGC TTTTTTGTGATCTAG C8J_0159 171265 - 170750 - | hypothetical protein C8J_0160 171759 - 171262 - | hypothetical protein TERM 197 171588 - 171561 - G 75 -7.2 -4.14392 | overlap 171546 171563 171582 TTTCAAGCCTTAAAA TATCTTCTTTTA GGCT TAAAAGAAGATC AAAAATAATTTTTTC TERM 198 171586 - 171563 - G 83 -9.8 -3.67 | overlap 171546 171561 171582 TCAAGCCTTAAAATA TCTTCTTTTA GGCT TAAAAGAAGA TCAAAAATAATTTTT C8J_0161 172634 - 171750 - | prenyltransferase TERM 199 172964 - 172951 - g 74 -5.3 -4.9181 | opp_overlap 172951 AGAGAATATCAAAAA GCAAA AGAA TTTGC TTTAGCTAGAAATTT miaA 172705 - 173574 + | tRNA delta(2)-isopentenylpyrophosphate transferase C8J_0163 174123 - 173560 - | hypothetical protein TERM 200 174476 - 174435 - R 75 -8.3 -3.41745 | gap 1, opp_overlap 174432 174431 174450, overlap 174437 174450 TTTGTAGAATACGAA TAGCTTTTGATATAAGTCTA TTA TAGACTTATATCAAG-GCTG GGCATTATTGAGCTG TERM 201 174474 - 174437 - R 85 -10.9 -3.27771 | gap 1, opp_overlap 174432 174431 174450, overlap 174435 174450 TGTAGAATACGAATA GCTTTTGATATAAGTCTA TTA TAGACTTATATCAAG-GC TGGGCATTATTGAGC C8J_0164 174663 - 174481 - | hypothetical protein sodB 174932 - 175594 + | superoxide dismutase, Fe TERM 202 175617 - 175601 - T 82 -8.7 -3.92716 | opp_overlap 175601 GTAAAATAATTTAAA GGCATCA AAA CGATGCC TTTTTTACTCTCCTA TERM 203 175601 - 175617 + T 100 -8 -5.23316 | opp_overlap 175601 GTAAAATAATTTAAA GGCATC AAAAC GATGCC TTTTTTACTCTCCTA C8J_0166 176827 - 175622 - | saccharopine dehydrogenase C8J_0167 177768 - 176863 - | iron ABC transporter, ATP binding subunit C8J_0168 179371 - 177755 - | iron ABC transporter, permease protein TERM 204 177906 - 177882 - G 70 -6.5 -4.13654 | opp_overlap 177883, overlap 177878 177898 CTTGCAAACCAGAAA GCTTTAACACT TAA AGTTTCAAAGC CAAAAGGCGCTAAAA TERM 205 178215 - 178204 - G 71 -2.2 -5.36364 | CCAAAAATACAAAAA GCAC TATA ATGC TAATCCCTAAAGCAG TERM 206 179340 - 179323 - G 89 -7 -5.4593 | GCAAAACAAGAAAAA GGGCAA GTAAAA TTGCCC CGAGTTTATAGTATT C8J_0169 180375 - 179371 - | iron ABC transporter, periplasmic iron-binding protein C8J_0170 180496 - 180386 - | hypothetical protein TERM 207 181109 - 181125 + G 72 -8.1 -3.28966 | overlap 181107 181103 GCTATTCCTTATGTT TTAATCG CTA CGATTAA TATCTATTTTGCTAG TERM 208 181537 - 181513 - g 90 -10.1 -3.96842 | opp_overlap 181520 181529, overlap 181520 ACTTGAATATAACAA TCAAAAAGCTG AAG CAGCTTTTAGA AAAGAGCTTGTTTAT TERM 209 181530 - 181520 - g 83 -6.8 -5.01845 | opp_overlap 181520 181529, overlap 181513 TATAACAATCAAAAA GCTG AAG CAGC TTTTAGAAAAGAGCT TERM 210 181520 - 181530 + G 72 -6.8 -4.07687 | opp_overlap 181520 181513, overlap 181529 TATAACAATCAAAAA GCTG AAG CAGC TTTTAGAAAAGAGCT C8J_0171 180695 - 181894 + | putative transporter C8J_0172 181993 - 183351 + | hypothetical protein TERM 211 183349 - 183366 + T 100 -8.5 -4.97405 | opp_overlap 183349 183352 AATAAAGATGAAGAA TAAGCCT CTTT AGGCTTA TTTCTTTTTGTAAAT TERM 212 183366 - 183349 - T 82 -8.5 -3.88641 | opp_overlap 183349, overlap 183352 AATAAAGATGAAGAA TAAGCCT CTTT AGGCTTA TTTCTTTTTGTAAAT C8J_0173 184548 - 183364 - | Ser/Thr protein phosphatase family protein TERM 213 184183 - 184201 + g 91 -5.4 -5.80364 | overlap 184185 GATGATATATCCATT TTTTTTAG CTT CTAAAAGA TTTTTTTCTTGACAT TERM 214 184350 - 184380 + g 73 -9.3 -2.55019 | gap 1, opp_overlap 184353 184354, overlap 184349 184353 184354 GCATACGCATTTCTA GAAG-TTTGAGTAA AATT TTACTCAAATCTTC ATCATTTTTAACATT TERM 215 184354 - 184375 + g 74 -8.9 -3.26718 | opp_overlap 184353 184354, overlap 184353 184350 184349 ACGCATTTCTAGAAG TTTGAGTAA AATT TTACTCAAA TCTTCATCATTTTTA TERM 216 184375 - 184354 - G 70 -8.9 -2.58663 | opp_overlap 184354 184353 184350 184349, overlap 184353 ACGCATTTCTAGAAG TTTGAGTAA AATT TTACTCAAA TCTTCATCATTTTTA C8J_0174 184767 - 184558 - | PhnA domain protein C8J_0175 185479 - 184760 - | TerC family integral membrane protein purN 186117 - 185551 - | phosphoribosylglycinamide formyltransferase TERM 217 186017 - 186038 + g 74 -2.3 -5.63504 | overlap 186013 186018 AGGCAAAGTACTACT TCATAGG TATTTTCC CCTATGG TTTTTTTATGAAGTT C8J_0177 187478 - 186108 - | hypothetical protein TERM 218 186409 - 186393 - G 72 -6.7 -4.10007 | ATAATTTTGTGAAAA TTTTCTA GCA TAGAAAA AGCGATTTTTTTGCA C8J_0178 188160 - 187462 - | hypothetical protein C8J_0179 189667 - 188162 - | Mg chelatase-related protein def 190191 - 189664 - | peptide deformylase TERM 219 190204 - 190237 + r 100 -11.3 -5.00884 | opp_overlap 190212 CATTAAAAAACCTTT GTTTTAAATGATCTC CAAA GAAATCATTTAAAAC TTTTTTCCAAAACCT clpP 190811 - 190227 - | ATP-dependent Clp protease proteolytic subunit TERM 220 190527 - 190512 - G 74 -5.4 -4.9445 | ACAACTAAGCAAAAA TGCTCC CATC GAAGCA GCTTGTCCTATACAA tig 192145 - 190811 - | trigger factor TERM 221 191287 - 191300 + g 70 -3.9 -5.02715 | CATCATTTACAAGTT TGAAA AGTT TTTCA TTTTTGATTTGCTCT TERM 222 192195 - 192165 - H 74 -7 -4.36914 | opp_overlap 192170, overlap 192170 TTTTTCCTTATAAAA TAAAATTTGCTTTC AAT GATAGCAAATTTTT CCTTATTGCTTGCAT TERM 223 192170 - 192190 + H 86 -6.9 -5.00339 | opp_overlap 192170 192165 CCTTATAAAATAAAA TTTGCTTTC AAT GATAGCAAA TTTTTCCTTATTGCT TERM 224 192190 - 192170 - H 90 -6.9 -5.18371 | opp_overlap 192170, overlap 192165 CCTTATAAAATAAAA TTTGCTTTC AAT GATAGCAAA TTTTTCCTTATTGCT folE 192289 - 192861 + | GTP cyclohydrolase I fliI 192861 - 194246 + | flagellum-specific ATP synthase purF 195586 - 194249 - | amidophosphoribosyltransferase TERM 225 194757 - 194773 + g 70 -3.7 -5.08824 | opp_overlap 194756 194757, overlap 194746 194759 ACAGGCACGACAAAG TCTGCTT TAT AAGCAAA TTTTTTAGCTAAAGC TERM 226 195538 - 195526 - G 75 -5.5 -4.8048 | GTTGCATAGCAAAAA GCGCA TAA TACGC ATAAGTGCTAGCATT dapB 196316 - 195588 - | dihydrodipicolinate reductase C8J_0187 197560 - 196379 - | recombination factor protein RarA TERM 227 196921 - 196945 + g 79 -5.7 -5.15117 | opp_overlap 196921 196920 CTTTTGAACTAACAC CTTCGCTAC TTATGGT GTTGCGAAG TTTTTTAAGATTTTC TERM 228 197392 - 197415 + g 85 -8.3 -4.40561 | opp_overlap 197384 197391 197405, overlap 197401 AATCTAAGCCAAATT CTTTTGCTA CAACTC TAGCAAAAG TTGTTTTTCCAGAAC C8J_0188 198687 - 197560 - | hypothetical protein TERM 229 198828 - 198788 - R 71 -7.1 -4.00756 | opp_overlap 198795 198801, overlap 198791 198801 TAGTTTAGTAAAGAA TGATTTTTATAAATCCCTT GTT AAGGGATTTATATTAATAA GCTTTTTTATAACAT TERM 230 198825 - 198791 - R 74 -8.8 -3.05069 | opp_overlap 198795 198801, overlap 198788 198801 TTTAGTAAAGAATGA TTTTTATAAATCCCTT GTT AAGGGATTTATATTAA TAAGCTTTTTTATAA TERM 231 198795 - 198821 + r 100 -14 -3.23611 | opp_overlap 198791 198788 198801, overlap 198801 GTAAAGAATGATTTT TATAAATCCCTT GTT AAGGGATTTATA TTAATAAGCTTTTTT TERM 232 198801 - 198815 + r 85 -8.6 -4.23674 | opp_overlap 198791 198788 198801, overlap 198795 AATGATTTTTATAAA TCCCTT GTT AAGGGA TTTATATTAATAAGC TERM 233 198815 - 198801 - R 82 -8.6 -3.88559 | opp_overlap 198801 198795, overlap 198791 198788 AATGATTTTTATAAA TCCCTT GTT AAGGGA TTTATATTAATAAGC C8J_0189 199169 - 198822 - | hypothetical protein C8J_0190 199892 - 199233 - | putative integral membrane protein C8J_0191 200211 - 199822 - | hypothetical protein TERM 234 200199 - 200210 + gH 83 -3 -5.73563 | CCAAGAAAGAAAGTT TGAA AAAT TTCA TTTTTTTCCTTTGAT TERM 235 200260 - 200272 + H 83 -3.5 -5.97979 | opp_overlap 200260, overlap 200252 ATAATTATAGCAAAA TAATT CAA AATTA TTTTTTTATTCTTGT C8J_0192 200408 - 201754 + | putative transmembrane transport protein TERM 236 201781 - 201797 + F 70 -5.2 -4.62069 | overlap 201772 GAACTTTTGATTTTT CAATGA TTGGT TCATTG TTTTATGATATTTTT TERM 237 202869 - 202892 + G 74 -6.2 -4.37527 | opp_overlap 202875, overlap 202875 ATATAGACCTTTCTT TAAAAAGTAT TTTT ATACTTTTTG TTTTAATGGTTGTGG TERM 238 202875 - 202886 + G 78 -3 -5.50723 | opp_overlap 202875, overlap 202869 ACCTTTCTTTAAAAA GTAT TTTT ATAC TTTTTGTTTTAATGG C8J_0193 201941 - 203935 + | oligopeptide transporter, OPT family TERM 239 203940 - 203955 + F 81 -9 -3.80858 | overlap 203942 AAGATGCTTAATTTT TGGGGT TAAA ACCCCA TTTAATCCATTCTGA C8J_0194 204009 - 204812 + | undecaprenyl-diphosphatase TERM 240 204923 - 204907 - f 74 -7.3 -3.9398 | TTAGAACTTTATAAA CACTCAC AGG GTAAGTG AGCGACAAAGGGTTA TERM 241 205803 - 205789 - g 70 -3.6 -5.06089 | overlap 205791 AAACTATAAAGAAAA TATGTA TTT TACACA AATTGATGAACAAGA TERM 242 206368 - 206354 - g 85 -2.8 -5.98781 | opp_overlap 206366 GATAATGAAAAAAAA CAACCT GTA ATGTTG CATCGTGCGATTTTA thrS 204944 - 206752 + | threonyl-tRNA synthetase TERM 243 207136 - 207158 + G 76 -7.6 -3.90291 | opp_overlap 207135 AAAGGACGTGAAATG GCAACTCCTG AAG CAGGTGTAGC TTTGCTTGAAAAAAT infC 206749 - 207267 + | translation initiation factor IF-3 TERM 244 207253 - 207296 + F 71 -6 -4.4267 | opp_overlap 207262, overlap 207262 207289 AATATGCTTGTAACT CCAAAAAAAGCTTAATCCAC TTTT GTGGATAAGGCTTTTAAAGG TTTTAAATTTTGAAA TERM 245 207287 - 207262 - f 90 -6.1 -5.47399 | opp_overlap 207253 207262 GTAACTCCAAAAAAA GCTTAATCCAC TTTT GTGGATAAGGC TTTTAAAGGTTTTAA TERM 246 207262 - 207287 + F 83 -8.3 -4.19276 | opp_overlap 207262, overlap 207253 GTAACTCCAAAAAAA GCTTAATCCAC TTTT GTGGATAAGGC TTTTAAAGGTTTTAA C8J_0197 207306 - 208397 + | D12 class N6 adenine-specific DNA methyltransferase TERM 247 208526 - 208540 + G 77 -7.2 -4.26076 | TCCAAAGTTTTATTT TCAAGA ATA TCTTGA TTTTGCTAGCAATAA C8J_0198 208437 - 210035 + | hypothetical protein C8J_0199 210184 - 210396 + | hypothetical protein C8J_0200 210494 - 210982 + | hypothetical protein C8J_0201 211051 - 212064 + | hypothetical protein TERM 248 212053 - 212088 + F 76 -3.6 -5.46706 | opp_overlap 212078, overlap 212078 AATGCTAATTTAAGA TATAGTTTTTAAATAA AAAA TAATTTAAAAATTGTA TTTTTATTTTAAGCT argC 212146 - 213174 + | N-acetyl-gamma-glutamyl-phosphate reductase C8J_0203 213184 - 213630 + | acetyltransferase argB 213640 - 214479 + | acetylglutamate kinase TERM 249 215441 - 215453 + G 71 -4.9 -4.82901 | GTTTAGATGAGTTGA TCAAA GAA TTTGA TTTTTGTAAAAAACG argD 214483 - 215670 + | acetylornithine aminotransferase pcm 216319 - 215690 - | protein-L-isoaspartate O-methyltransferase TERM 250 216170 - 216156 - G 74 -8.6 -3.3785 | CTAATCCATTGAGAA TTTGCC AAA GGCAAA GCATCAAGGCGATAA C8J_0207 216408 - 216956 + | transferase, hexapeptide repeat family C8J_0208 218298 - 216925 - | nicotinate phosphoribosyltransferase TERM 251 217076 - 217091 + g 88 -4 -5.72622 | opp_overlap 217076 ATAGTATTTAAAGAT GACTTT TTAA GAAGTC TTTTTTCTTTGTAGA nrdB 219307 - 218285 - | ribonucleotide-diphosphate reductase subunit beta TERM 252 219282 - 219294 + g 72 -2.7 -5.34381 | GTTTCGTTTGAACTT GGATT GTA AATTC TTTTTCTTTGCATTT C8J_0210 219731 - 219321 - | hypothetical protein TERM 253 219564 - 219548 - G 76 -3.7 -5.40072 | overlap 219550 TTTTTGTTAAAAAAA TAGCTTG AAT CAAACCA AATAAAAAAGTACAT pyrE 220340 - 219732 - | orotate phosphoribosyltransferase frr 220900 - 220343 - | ribosome recycling factor secG 221287 - 220916 - | preprotein translocase subunit SecG TERM 254 221358 - 221395 + r 87 -11.5 -2.74999 | opp_overlap 221363, overlap 221363 AAAGTTTTGAAACTT GAAAAGTTTTTGTGAGA AAAA TCCCACAAAAACTTATC TGCTATTGAAGCTTC TERM 255 221363 - 221390 + r 84 -10 -3.60348 | opp_overlap 221363, overlap 221358 TTTGAAACTTGAAAA GTTTTTGTGAGA AAAA TCCCACAAAAAC TTATCTGCTATTGAA TERM 256 221390 - 221363 - R 100 -12.2 -4.24002 | opp_overlap 221363 221358 TTTGAAACTTGAAAA GTTTTTGTGAGA AAAA TCCCACAAAAAC TTATCTGCTATTGAA C8J_0214 222086 - 221391 - | hypothetical protein TERM 257 221470 - 221459 - G 70 -5.8 -4.3341 | opp_overlap 221458 CAAAATCAAGATAAA GTGC TACT GCAC CTTCGATTGGAGTTT TERM 258 221562 - 221541 - G 71 -5.9 -4.43392 | opp_overlap 221554, overlap 221561 GTAAAATGAAAATAA TATTGCAGC TACT GCTGAAATA GCTAGATTAACTATA cynT 222246 - 222881 + | carbonic anhydrase C8J_0216 222878 - 224761 + | mechanosensitive ion channel family protein TERM 259 224762 - 224750 - T 74 -6.3 -4.41494 | opp_overlap 224759, overlap 224754 224759 GATTTGCAAGCAAAA GCTAT AAA ATAGC AAGATTTTATCTTGC TERM 260 224784 - 224754 - T 84 -11.4 -2.80479 | opp_overlap 224759, overlap 224750 224759 TGCAAGCAAAAGCTA TAAAATAGCAAGAT TTT ATCTTGCTATTTTT TTAAACTGGCATAAC TERM 261 224759 - 224779 + T 100 -11.3 -5.44119 | opp_overlap 224750 224754 224759 GCAAAAGCTATAAAA TAGCAAGAT TTT ATCTTGCTA TTTTTTTAAACTGGC TERM 262 224779 - 224759 - T 95 -11.3 -4.54477 | opp_overlap 224759, overlap 224750 224754 GCAAAAGCTATAAAA TAGCAAGAT TTT ATCTTGCTA TTTTTTTAAACTGGC C8J_0217 225756 - 224785 - | NifU family protein C8J_0218 226947 - 225766 - | putative aminotransferase (nifS-like protein) TERM 263 226964 - 226986 + r 71 -2.9 -5.61913 | gap 1 TTAAAATCCTTAATT TATCCTTAAT TTTA ATTA-GGATA TTTTTTATCTTTATT TERM 264 227134 - 227116 - R 86 -7.6 -4.84527 | opp_overlap 227115 227116 227119 TTTATATAGCAAAAA TAAGAAAT ACT ATTTCTTA AATTTTTCTTCGTAA C8J_0219 227526 - 227125 - | putative iron-binding protein TERM 265 227477 - 227491 + g 71 -7.2 -3.72324 | overlap 227474 AGTTCTTTATGTTGA TGATCT AAA AGATCA TTATTCATCGAAATA C8J_0220 228829 - 227663 - | hypothetical protein TERM 266 229139 - 229127 - g 71 -7.7 -3.43773 | overlap 229125 TCGCACAGCTAAATA TGTGC ATA GCACA AATGTAAAAGCTGTT rpmI 228984 - 229175 + | 50S ribosomal protein L35 TERM 267 229608 - 229594 - g 76 -6.4 -4.56597 | overlap 229574 CTGCTTTTGCAAAAA TTGCAG AGG CCGCAA AAAAAGCACTTTAAT C8J_0222 229269 - 229622 + | 50S ribosomal protein L20 TERM 268 229634 - 229672 + T 93 -6.3 -5.28683 | opp_overlap 229641, overlap 229626 229635 229638 TTAATTTTTTTTAGT GTAAGAATTTCAAGA TTTTTGATT TCTTGAAATTCTTAA TTTTTTAGTATTGAT TERM 269 229635 - 229671 + T 83 -9.8 -3.75583 | opp_overlap 229641, overlap 229626 229634 229638 TAATTTTTTTTAGTG TAAGAATTTCAAGA TTTTTGATT TCTTGAAATTCTTA ATTTTTTAGTATTGA TERM 270 229638 - 229668 + T 71 -7.1 -3.9735 | opp_overlap 229641, overlap 229626 229635 229634 TTTTTTTTAGTGTAA GAATTTCAAGA TTTTTGATT TCTTGAAATTC TTAATTTTTTAGTAT C8J_0223 230489 - 229677 - | hypothetical protein C8J_0224 231652 - 230651 - | hypothetical protein C8J_0225 231825 - 232682 + | hypothetical protein TERM 271 232684 - 232700 + F 70 -8.7 -2.62024 | opp_overlap 232684, overlap 232691 ACAAAGAAGATTAAA GAGCCTT TTT AGGGCTC TAAATTGTAGTGATG TERM 272 232700 - 232684 - f 70 -6.5 -4.05319 | opp_overlap 232684 232691 ACAAAGAAGATTAAA GAGCCTT TTT AGGGCTC TAAATTGTAGTGATG C8J_0226 232713 - 233189 + | hypothetical protein C8J_0227 234468 - 233158 - | putative transmembrane transport protein C8J_0228 234626 - 234471 - | hypothetical protein moaC 234719 - 235192 + | molybdenum cofactor biosynthesis protein C C8J_0230 235170 - 235433 + | hypothetical protein TERM 273 235783 - 235767 - g 95 -6.7 -5.79588 | overlap 235758 TGAAAATCAAAAAAA TTTGATT AAA AATCAAA TCAGTGATAATTTTT TERM 274 235809 - 235829 + G 70 -4.1 -4.92783 | overlap 235816 TTTTTTTGAATTCGA GAATATTTT ACA AGAATGTTC TTTTTGTGATGAATT C8J_0231 235447 - 236583 + | hypothetical protein TERM 275 236604 - 236581 - T 100 -11.2 -5.03747 | opp_overlap 236579 236584 236598 AAATTTGTTAAAAAA TAATATCCCA TTTT TGGGATATTA AATATCTATTTCTAT TERM 276 236584 - 236601 + T 73 -8.5 -3.20326 | opp_overlap 236581, overlap 236579 236598 TTTGTTAAAAAATAA TATCCCA TTTT TGGGATA TTAAATATCTATTTC xth 237360 - 236602 - | exodeoxyribonuclease III TERM 277 237451 - 237437 - H 70 -2.2 -5.47821 | ATCCATTTAAAAAAA TTCAAT AAA ATTAAA AGCTTAAATTTGGAG TERM 278 237646 - 237657 + G 71 -3 -5.19261 | GTGATTTGCTCTTTG CTTT TTAT AAAG TTTTTTACTAAATTT TERM 279 238510 - 238498 - g 73 -3.5 -5.27335 | CCTTTTAAAGAAAAA TTAAA TCA TTTAA GTGATCAAAATATAA TERM 280 238598 - 238580 - g 73 -9 -3.09234 | ATAAACGCTATCCAA GTGAATTT AAA AAATTCAC TCCAACTTGTGATAC C8J_0233 237478 - 239016 + | sulfatase, putative TERM 281 239316 - 239328 + G 71 -3.3 -5.27938 | GCAGTGTTTTTTAGT GTGCT TTT AGCTC TTTTTGTTTGGGGCT dgkA 239013 - 239369 + | diacylglycerol kinase TERM 282 239569 - 239549 - g 93 -4.1 -6.17268 | opp_overlap 239550, overlap 239550 TTAGAAGAAAAAAAA CTTTTTAAG CGT CTTAAAAAT GGATTTTATCAGCTA TERM 283 239568 - 239550 - g 79 -7.6 -4.27921 | opp_overlap 239550, overlap 239549 TAGAAGAAAAAAAAC TTTTTAAG CGT CTTAAAAA TGGATTTTATCAGCT C8J_0235 239366 - 239611 + | helix-turn-helix motif-containing protein TERM 284 240530 - 240519 - g 73 -5.8 -4.68512 | opp_overlap 240518 TTAGAAGAAAAAGAA TGGC AAGT GCCA AATGTTTATGAAGAT pyrC 239601 - 240608 + | dihydroorotase TERM 285 240609 - 240631 + T 81 -9.2 -3.78141 | opp_overlap 240605 240603 CAATTAAAACATTGA TTTCCCACCT TAA AGGTGGAAAA TTTAAGCTTTATTTA C8J_0237 240854 - 240633 - | hypothetical protein TERM 286 240722 - 240712 - G 74 -5.4 -4.88407 | overlap 240716 AATAAAGCAATAAAA CTGA CTA TCAG CGATAATAAACCAGC C8J_0238 241629 - 240910 - | hypothetical protein TERM 287 240984 - 241007 + g 80 -6.8 -4.75219 | opp_overlap 240984 240987 TTTCAACAAAAGAAC TTACAGCTTC TTTA GAAGTTGTGA TTTTGTTCATGCTTA TERM 288 241701 - 241678 - R 95 -11.1 -4.18161 | opp_overlap 241683, overlap 241662 CATAAATTTTTAAAA TTCAAGCCC TTTTTT GGGCTTGAA TGACTAATTAAAACC C8J_0239 243706 - 241709 - | putative methyl-accepting chemotaxis signal transduction protein TERM 289 242275 - 242290 + g 72 -6.2 -4.28049 | TAGCTAAAGCATTAG CAAAGT CTGA ACTTTG TTTTAGCATTTTAAC TERM 290 243227 - 243241 + g 76 -7.8 -3.94381 | AGTTAAACCAACCTC TCCGCT AGC GGCGGA TTTATAAGGTTCTGT TERM 291 244271 - 244245 - g 73 -6 -4.68424 | overlap 244265 TAAGCGAGTTAAAAA TTTGTCCCTT GCCCCAA AAAGGACAAA ATCCTCCGAAATTTC C8J_0240 243899 - 244774 + | zinc transporter ZupT TERM 292 244791 - 244774 - T 81 -9.9 -3.21276 | opp_overlap 244774, overlap 244772 TTTGCTTGGACAATA GAAAGCC TTGC GGCTTTC TTAAATTTAGTTCGC TERM 293 244774 - 244791 + T 82 -9.9 -3.33399 | opp_overlap 244772 244774 TTTGCTTGGACAATA GAAAGCC TTGC GGCTTTC TTAAATTTAGTTCGC C8J_0241 247314 - 244798 - | hypothetical protein C8J_0242 247900 - 247325 - | putative cytochrome C-type haem-binding periplasmic protein TERM 294 247903 - 247881 - G 78 -6.4 -4.81212 | opp_overlap 247879 247881 247885, overlap 247885 GCTAGGACAACAAAA GAAATGAAAA TCT TTTTCATTAC TATTCCTTAATATAA TERM 295 247899 - 247885 - G 77 -5.8 -4.92812 | opp_overlap 247881 247879 247885, overlap 247881 GGACAACAAAAGAAA TGAAAA TCT TTTTCA TTACTATTCCTTAAT C8J_0243 248890 - 248381 - | hypothetical protein C8J_0244 249420 - 248890 - | hypothetical protein TERM 296 249087 - 249109 + g 73 -3.6 -5.23016 | overlap 249085 CAAAAATTTTAGCTG TAATTTTACA TTC TTTAAAATTA TTTTTTGAATTATTT TERM 297 249357 - 249345 - G 86 -2.7 -6.10295 | TGAAGAGAAAAAAAA CTAAT AAA ATCAG CATATAATCTACTAA C8J_0245 250521 - 249433 - | SPFH domain / Band 7 family protein ilvE 251448 - 250534 - | branched-chain amino acid aminotransferase C8J_0247 251624 - 251830 + | 4-oxalocrotonate tautomerase family protein C8J_0248 251827 - 252282 + | anti-oxidant AhpCTSA family protein TERM 298 252345 - 252370 + G 70 -4.2 -4.91109 | gap 1, opp_overlap 252366 GAACTTAGAAAGACT TATCCTGATGA AAAAA TCAT-AGGATA TTTTTATGATCCAAA TERM 299 253309 - 253287 - g 76 -10 -2.78463 | AGCCCTGTGATTATA CTTGAAGAAA TTT TTCCTTCAAG ATATGAAGTGATAGC C8J_0249 252282 - 253373 + | hypothetical protein TERM 300 253423 - 253437 + F 72 -4.4 -5.07971 | opp_overlap 253433, overlap 253433 AATTTTTAATGATTT TTTTAT ATA ATAAAA TTTTTAATTGTTTTC fabZ 253468 - 253908 + | (3R)-hydroxymyristoyl-ACP dehydratase lpxA 253908 - 254699 + | UDP-N-acetylglucosamine acyltransferase clpX 254692 - 255915 + | ATP-dependent protease ATP-binding subunit mreB 255927 - 256967 + | cell shape-determining protein MreB C8J_0254 256957 - 257706 + | rod shape-determining protein MreC TERM 301 258228 - 258206 - g 75 -4.2 -5.19212 | AGTATTATTAAAAAA GAAAAAATTG ATG CAATTTTACC AACCATGGGTGGACA TERM 302 258392 - 258375 - g 78 -3.4 -5.54894 | overlap 258377 AATGTATGAAAAAAA TCGGCA TGGATT TGCCAA AATCGATGTATGCGT TERM 303 260398 - 260382 - g 70 -3.7 -5.17353 | ATATCGATGAAAAAA TGCAAGA ATT TATTGCA CAAAAAACCGCAGAT carB 257966 - 261235 + | carbamoyl phosphate synthase large subunit TERM 304 261611 - 261577 - g 74 -8.8 -3.31726 | overlap 261575 261578 261589 GTTGCTGATATAATA CTTGATGAGAAATTTT TCG AAAATATCCCATCAAA AATATTAAAACTTTC TERM 305 261610 - 261578 - g 76 -10.1 -2.58822 | overlap 261577 261575 261589 TTGCTGATATAATAC TTGATGAGAAATTTT TCG AAAATATCCCATCAA AAATATTAAAACTTT C8J_0256 261232 - 261654 + | hypothetical protein tal 262632 - 261655 - | transaldolase serB 263255 - 262632 - | phosphoserine phosphatase SerB TERM 306 263131 - 263149 + g 72 -8.8 -3.00451 | overlap 263128 263145 AAAAAATCAAGCTCT CCAGCCAT GGC ATGGCGGG TAATTTCGCTTGTTT cheW 263776 - 263255 - | purine-binding chemotaxis protein CheW cheA 266090 - 263781 - | chemotaxis protein CheA TERM 307 265598 - 265624 + g 75 -5.8 -4.70107 | opp_overlap 265598 265601, overlap 265601 CACTTAATTGATTAA CATCTACTTCAG GTT CAGGAGTAGTTG TTTCTTGTTTTGGTG TERM 308 265601 - 265621 + g 74 -6.1 -4.42118 | opp_overlap 265601 265598, overlap 265598 TTAATTGATTAACAT CTACTTCAG GTT CAGGAGTAG TTGTTTCTTGTTTTG cheV 267050 - 266094 - | chemotaxis protein CheV C8J_0262 267660 - 267043 - | hypothetical protein TERM 309 267428 - 267414 - G 72 -2.8 -5.41143 | opp_overlap 267414 GAGGTGGTAAAAAAA TATCTC CGT GAGCTA ATTTTATAAAAGCAC greA 268296 - 267811 - | transcription elongation factor GreA lpxB 269402 - 268308 - | lipid-A-disaccharide synthase TERM 310 268800 - 268784 - G 81 -7.3 -4.58685 | opp_overlap 268784 268786 AAAGTTCTTTAAAAA TAGGCAT TAA ACGCCTA ATTTCACTACGCCTT TERM 311 268957 - 268947 - G 70 -4 -5.00616 | GCTTTTGTTAAAAAA TTGA TTA TCAA AGGGCAAAATAGAAG C8J_0265 272242 - 269399 - | hypothetical protein TERM 312 271485 - 271474 - G 71 -3 -5.2197 | CAGAAAAATTAAAAA CAAA GCCT TTTG GAAATTCATCTTCTT TERM 313 272277 - 272310 + r 79 -9.1 -3.61894 | opp_overlap 272291, overlap 272280 TAATTGTTTTTATCA TTTGCAGTATGTAAG AATT TTTACATACTGAAAA TTCTTGCAACAGCTT C8J_0266 273856 - 272369 - | hypothetical protein TERM 314 272863 - 272879 + g 91 -5.3 -5.88197 | opp_overlap 272863 TATATTCAAGATTAA TAAAAAA ATG TTTTTTA TTTTTTTCTATTTCA C8J_0267 276320 - 273858 - | hypothetical protein TERM 315 274883 - 274903 + g 74 -3.3 -5.44119 | opp_overlap 274899, overlap 274886 CTTCTTCATCTTTGG TGGCATTTG TAT CAAATGTAA TTTTTTTACACTCCA TERM 316 276668 - 276649 - R 89 -10.8 -3.69283 | opp_overlap 276653 GAAGTTATGCAAGAA TACACGCT AAAA AGCGTGTA TGAAGATTTATTCTC C8J_0268 277428 - 276676 - | major antigenic peptide PEB3 TERM 317 277565 - 277527 - R 91 -9.9 -4.37971 | opp_overlap 277527 277526, overlap 277529 AAAATATTATTAAAA TCTAACTTTTGCTTG GTATTTTTG CAAGCAAAAGTTAAA ATTGTTATTGATACT TERM 318 277563 - 277529 - R 78 -10.3 -2.51609 | opp_overlap 277527 277526, overlap 277527 AATATTATTAAAATC TAACTTTTGCTTG GTATTTTTG CAAGCAAAAGTTA AAATTGTTATTGATA C8J_0269 278940 - 277570 - | hypothetical protein TERM 319 278901 - 278886 - G 72 -6.2 -4.20932 | opp_overlap 278881 278886 AATATCTAGGTAAAA TTTCCT CTTT AGGAAA TTTAATAGCTTTTGC surE 279119 - 279895 + | stationary phase survival protein SurE C8J_0271 279888 - 280544 + | ThiF family protein TERM 320 280964 - 280951 - g 76 -2.5 -5.61824 | overlap 280942 CAAAATTTAAAAAAA TTTTT AATG AAAAA AGATGTGGTTTATAA C8J_0272 280528 - 280986 + | putative acetyltransferase TERM 321 281080 - 281029 - T 100 -12.8 -5.186 | opp_overlap 281019 281034, overlap 281019 281030 281032 281033 TAAAAGATATAAAAA TCATTTTTTTCTATCTTAGATAAA TGAA TTTATCTAAGATAGAAAAAATTAC AAAAATAGCTAGATG TERM 322 281079 - 281030 - T 100 -16.3 -3.6872 | opp_overlap 281019 281034, overlap 281019 281029 281032 281033 AAAAGATATAAAAAT CATTTTTTTCTATCTTAGATAAA TGAA TTTATCTAAGATAGAAAAAATTA CAAAAATAGCTAGAT TERM 323 281077 - 281032 - T 100 -16.7 -3.38472 | opp_overlap 281019 281034, overlap 281019 281030 281029 281033 AAGATATAAAAATCA TTTTTTTCTATCTTAGATAAA TGAA TTTATCTAAGATAGAAAAAAT TACAAAAATAGCTAG TERM 324 281076 - 281033 - T 100 -20.2 -2.61457 | opp_overlap 281019 281034, overlap 281019 281032 281030 281029 AGATATAAAAATCAT TTTTTTCTATCTTAGATAAA TGAA TTTATCTAAGATAGAAAAAA TTACAAAAATAGCTA panD 281476 - 281096 - | aspartate alpha-decarboxylase panC 282321 - 281473 - | pantoate--beta-alanine ligase panB 283156 - 282332 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 325 284107 - 284097 - g 76 -2.6 -5.65678 | opp_overlap 284097 ATAAAAGAGAAAAAA TTTT AGA AAAA TATTTAGATGAACTT C8J_0276 283376 - 284149 + | putative periplasmic beta-lactamase modC 285118 - 284234 - | molybdate transport system ATP-binding protein TERM 326 284337 - 284349 + g 72 -6.3 -4.34947 | opp_overlap 284331, overlap 284333 TTTAGAAATTCCTCT TCACT AAG AGTGA TTTTAATAATATCTT modB 285789 - 285115 - | molybdate transport system permease protein TERM 327 285198 - 285181 - G 73 -3.5 -5.29208 | AAAAGAAAAAATAAA CAATATA AAAG CATATTG ATGAGCTAAGCTATA C8J_0279 286183 - 285782 - | hypothetical protein modA 286929 - 286180 - | molybdate transport system substrate-binding protein TERM 328 286727 - 286714 - G 71 -2.4 -5.40474 | opp_overlap 286714 ATCCGCTGAAAAAAA GAGA TCAAAT TCTC TTCCTTGTTTTAAAA bioC 287666 - 286980 - | biotin biosynthesis protein BioC TERM 329 287078 - 287065 - G 76 -5.3 -5.01732 | overlap 287077 AATTCTTTTAAAAAA CCTTT ATTT AAAGG ATAAAATCCTAAAGA TERM 330 287597 - 287566 - G 81 -8.4 -4.09511 | gap 1, opp_overlap 287558 AATACTTTTTCAAAA TGTGAAATTCTTAAA TTT TTTAA-AATTTCACA AAGTTTTAAACCCAT C8J_0282 288274 - 287663 - | hypothetical protein TERM 331 287754 - 287770 + g 73 -3.7 -5.28481 | TTTTTTAAAGCATTT GGTGGAA AAA TTTCATC TTTTTTACTTGAATA TERM 332 288011 - 288022 + g 71 -5.8 -4.45696 | TATGCCTAAATTTGT GCCA TTTA TGGC TATTTTTTGTTTAAA bioF 289413 - 288271 - | 8-amino-7-oxononanoate synthase TERM 333 288525 - 288512 - G 71 -2.3 -5.42259 | opp_overlap 288512 TTACTTTTAAAAAAA GTGCT TAAA AGCTC TAATTTTTCTCTTTC TERM 334 289061 - 289047 - G 78 -6.4 -4.83615 | TATCGGTTAGAAAAA GCGTCT TAG AAACGC TAGAAAGTGCTGCTA TERM 335 290271 - 290241 - g 83 -10.6 -3.2794 | opp_overlap 290237 290236 TTGGACGCACAGGAA CTTTGTTTGCCTTA CAT CAATGCAAACAAAG CCCCGATTTTATCTG TERM 336 290535 - 290519 - g 78 -6.7 -4.67552 | opp_overlap 290519 290518 TTTATCAAAAAAGAA TTTTCAA GAC TTGAAAA ATTTGACTTTTTGGG bioA 289481 - 290764 + | adenosylmethionine--8-amino-7-oxononanoate transaminase bioD 291356 - 290751 - | dethiobiotin synthetase C8J_0286 291680 - 291366 - | SMR family multidrug efflux pump TERM 337 291433 - 291422 - G 78 -3 -5.53991 | opp_overlap 291422 291426 CAGTGATTAAAAAAA GTTT TAAA AAAC TTTTACTTTCTTTAT C8J_0287 292057 - 291683 - | SMR family multidrug efflux pump C8J_0288 292155 - 292691 + | 50S ribosomal protein L25/general stress protein Ctc TERM 338 292738 - 292752 + G 71 -5.6 -4.51097 | opp_overlap 292738 292737 AGAGTATGAAAATAC CCGTCA TAA TGTCGG TTTTATGCTAATTGA pth 292688 - 293233 + | peptidyl-tRNA hydrolase TERM 339 293361 - 293376 + G 74 -6.2 -4.3821 | GATCTACCAAAAGCC GCAAAT CTTG ATTTGC TTTATGTTATGTTTT TERM 340 294108 - 294127 + G 100 -9.4 -4.5538 | opp_overlap 294108 294112 TTTTTTCCTGTAATA GCAAGATT TTTT AATCTTGC TTTTGTAACTTTTAT TERM 341 294127 - 294108 - g 75 -9.4 -3.01712 | opp_overlap 294108, overlap 294112 TTTTTTCCTGTAATA GCAAGATT TTTT AATCTTGC TTTTGTAACTTTTAT C8J_0290 293235 - 294293 + | hypothetical protein lysA 294337 - 295545 + | diaminopimelate decarboxylase TERM 342 296131 - 296113 - g 77 -4.7 -5.31091 | opp_overlap 296123 GATAAGAAAACAAAA TTCAAAA ATCGA TTTTGAA GATATTAAAATCATT C8J_0292 295547 - 296314 + | HAD family hydrolase TERM 343 296991 - 296955 - g 70 -8.1 -3.15638 | opp_overlap 296952 AAAATCTACAGCTAA TGCGGCTTATTTAGCTT CGC AAGATAAATATGCGGCA GCAATTTGCTCTAAA pheA 296302 - 297375 + | chorismate mutase/prephenate dehydratase TERM 344 297503 - 297483 - g 73 -9.1 -2.56696 | overlap 297482 297481 CAAGTAATGAAAATC CTTTTGGTA CGC CACCAAAAG CTATAGAATGCTTAA TERM 345 298065 - 298089 + G 71 -8.7 -2.87003 | overlap 298061 GATTAGGAGGCTTAC GCATTGGTTAT GGT ATAGCTAATGC TAATATTATTAATGC hisC 297365 - 298459 + | histidinol-phosphate aminotransferase TERM 346 300038 - 300026 - g 71 -3.4 -5.30155 | opp_overlap 300026 GCAGCAAGGAAAAAA GTTG AAGAA CAAC TTGGTTTTGGGGATA fliF 298511 - 300193 + | flagellar MS-ring protein TERM 347 300236 - 300261 + G 74 -6.9 -4.31835 | TGGTCTATGATGATT TATCGATGCCT GAGA AGGTAGCGATA TTTCTTATACAACTT fliG 300193 - 301221 + | flagellar motor switch protein G TERM 348 301760 - 301746 - g 73 -8.6 -3.10925 | overlap 301745 AAAATGAGAAAGAAT TAGCAG ATA CTGCTA TAGATATCGCTAAAG fliH 301229 - 302059 + | flagellar assembly protein H dxs 302052 - 303899 + | 1-deoxy-D-xylulose-5-phosphate synthase C8J_0299 303985 - 304395 + | FUR family transcriptional regulator TERM 349 304417 - 304405 - f 72 -6.3 -4.34008 | opp_overlap 304404 304407 304413, overlap 304406 304407 304413 CATTAAGCAAAATAA GGTTA AAA TAACC CATATATTTTAAGGG TERM 350 304407 - 304441 + F 79 -10.3 -3.02632 | opp_overlap 304405 304407 304406 304413, overlap 304404 304413 TTAAGCAAAATAAGG TTAAAATAACCCATA TATTT TAAGGGTTATTTTAA TGGTTTATGAAATTC TERM 351 304441 - 304407 - f 78 -10.3 -2.50508 | opp_overlap 304404 304407 304413, overlap 304405 304406 304413 TTAAGCAAAATAAGG TTAAAATAACCCATA TATTT TAAGGGTTATTTTAA TGGTTTATGAAATTC TERM 352 304785 - 304797 + G 70 -3.5 -5.07107 | AGAGCCTAAAATTTG TATTT TAA AAATA TTTTTTCCAACTTTG TERM 353 304905 - 304919 + G 70 -5.8 -4.34402 | opp_overlap 304914 TATCGTTTTATATGG TTTTGA ATA TCAAAA TTTTGATATAGAGAA C8J_0300 304441 - 305637 + | hypothetical protein TERM 354 305795 - 305784 - g 78 -3 -5.50499 | TTATATTTAAAAAAA GATT TAAA AATC GCTGATATTGCCTGT ubiE 305640 - 306347 + | ubiquinone/menaquinone biosynthesis methyltransferase xseA 306344 - 307507 + | exodeoxyribonuclease VII large subunit serC 307517 - 308593 + | phosphoserine aminotransferase C8J_0304 308590 - 308940 + | hypothetical protein TERM 355 308950 - 308930 - T 86 -11.3 -3.27525 | opp_overlap 308934, overlap 308925 CTTTTGGAAAGCTAA GAGAGAATT AAA AATTCTCTC CTCCAAATTTTAAAA fabH 309911 - 308937 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 356 309824 - 309835 + g 72 -4.4 -5.03314 | overlap 309822 TGATCCATTCATCGG TGGT ATCT ACCA TTTTTTCAAGATCAG plsX 310890 - 309904 - | putative glycerol-3-phosphate acyltransferase PlsX C8J_0307 311042 - 310896 - | 50S ribosomal protein L32 TERM 357 311031 - 311041 + g 74 -3.2 -5.43621 | GCTCACTCTTCTCTT TGGT ACT GCCA TTTTTTCTCCTTTAT C8J_0308 311419 - 311066 - | hypothetical protein ndk 311833 - 311420 - | nucleoside diphosphate kinase TERM 358 311934 - 311907 - R 73 -5.7 -4.59424 | opp_overlap 311907 311913 311930, overlap 311913 AAAGTTAAATTAAAA GAAAAAGCTAG GAATCT CTAGCTTTTTA ATTTTTTAAAATTAT TERM 359 311928 - 311913 - R 83 -4.7 -5.56372 | opp_overlap 311913 311907, overlap 311907 AAATTAAAAGAAAAA GCTAG GAATCT CTAGC TTTTTAATTTTTTAA TERM 360 311913 - 311928 + r 81 -5.4 -5.25735 | opp_overlap 311907 311913, overlap 311907 AAATTAAAAGAAAAA GCTAGG AATC TCTAGC TTTTTAATTTTTTAA fdxA 312230 - 311946 - | ferredoxin, 4Fe-4S TERM 361 312326 - 312277 - H 78 -7.7 -4.46926 | gap 1, opp_overlap 312277 312285 312288, overlap 312285 312314 GATTTTAGCATAAAA TTCTTAAATAATGTAAA-TTTTGA TAA TCAAAAATTTACATTATTTGATAA TAATTATAACTTTCT TERM 362 312277 - 312326 + H 79 -9.9 -2.88398 | gap 1, opp_overlap 312277 312285 312314, overlap 312285 312288 GATTTTAGCATAAAA TTCTTAAATAATGTAAA-TTTTGA TAA TCAAAAATTTACATTATTTGATAA TAATTATAACTTTCT TERM 363 312318 - 312285 - H 81 -9.3 -3.67737 | gap 1, opp_overlap 312277 312285 312288, overlap 312277 312314 CATAAAATTCTTAAA TAATGTAAA-TTTTGA TAA TCAAAAATTTACATTA TTTGATAATAATTAT TERM 364 312285 - 312318 + H 81 -9.3 -3.82433 | gap 1, opp_overlap 312285 312277 312314, overlap 312277 312288 CATAAAATTCTTAAA TAATGTAAA-TTTTGA TAA TCAAAAATTTACATTA TTTGATAATAATTAT TERM 365 312288 - 312315 + H 70 -6.6 -4.03141 | gap 1, opp_overlap 312285 312277 312314, overlap 312285 312277 AAAATTCTTAAATAA TGTAAA-TTTTGA TAA TCAAAAATTTACA TTATTTGATAATAAT TERM 366 312551 - 312566 + G 71 -4.8 -4.81644 | overlap 312560 AAGGAGCGGTAGTAT TCTTTT ATCC AAAAGA TTTTACTTTTGTTTG ahpC 312436 - 313032 + | antioxidant, AhpC/Tsa family TERM 367 313061 - 313047 - f 71 -7.1 -3.96327 | opp_overlap 313047 ATTTCTTAGTATAAA GCCTC TTTAC GAGGC TTTTTCTTCATTTTT TERM 368 313047 - 313061 + F 95 -7.1 -5.30199 | opp_overlap 313047 ATTTCTTAGTATAAA GCCTC TTTAC GAGGC TTTTTCTTCATTTTT TERM 369 313553 - 313541 - g 70 -6.3 -4.11751 | opp_overlap 313541, overlap 313532 ATCAATCCTCTAAAA GGTTT AAA AAACC TTTTTTCATTGAAAA TERM 370 313541 - 313553 + G 82 -6.3 -5.26875 | opp_overlap 313532 313541 ATCAATCCTCTAAAA GGTTT AAA AAACC TTTTTTCATTGAAAA TERM 371 313724 - 313743 + G 90 -7.2 -5.37865 | opp_overlap 313712 AGAGCTATTGTTTTA GCAGCTAT TGTT ATAGTTGC TTTTTTAATTATTGC flhB 313151 - 314239 + | flagellar biosynthesis protein FlhB C8J_0313 314988 - 314245 - | flagellar motor protein MotB TERM 372 314928 - 314910 - G 81 -8.2 -4.20883 | overlap 314902 314901 TAAAAAGTGCCAAAA GCAAACTT AGA AAGTCTGC ATAAGGTACAGCCCA motA 315767 - 314991 - | flagellar motor protein MotA polA 318422 - 315783 - | DNA polymerase I TERM 373 318101 - 318079 - G 79 -7.1 -4.386 | gap 1, opp_overlap 318082 318082, overlap 318068 CAAGTTCTTACAAAA GAAG-CGATG ATAT CATCGGCTTC ATAACCTTCTTGAGA TERM 374 318571 - 318558 - H 74 -2.5 -5.64274 | TTATTTATAAAAAAA TATAT TAAA ATATA AGGATAATGTAATGA C8J_0316 318583 - 319944 + | major facilitator family transporter C8J_0317 319941 - 320948 + | inosine-uridine preferring nucleoside hydrolase family protein C8J_0318 321347 - 320904 - | putative integral membrane protein uvrA 324177 - 321352 - | excinuclease ABC subunit A TERM 375 321395 - 321410 + g 85 -2.5 -5.86465 | AAGTCTAGATAATAT CCTGT GTAAGA ACGGG TTTTTTTGTGTTCTT TERM 376 322569 - 322579 + g 71 -4.6 -4.81863 | GCTCTACGACAATTA GGGT ATT GCCC TTTTGTTGTAAATTT TERM 377 324252 - 324231 - R 71 -5.9 -4.50841 | overlap 324234 ATAATAATATTAAAA GAACTTGGA TAAA TCCAAGTTA AAAATTTATAAGATT TERM 378 324249 - 324234 - R 77 -7.6 -4.33487 | overlap 324231 ATAATATTAAAAGAA CTTGGA TAAA TCCAAG TTAAAAATTTATAAG C8J_0320 325035 - 324250 - | hypothetical protein C8J_0321 325133 - 325282 + | hypothetical protein trpE 325447 - 326697 + | anthranilate synthase component I trpD 326694 - 328295 + | anthranilate synthase component II trpF 328282 - 328881 + | N-(5'phosphoribosyl)anthranilate isomerase TERM 379 329408 - 329418 + G 72 -2.6 -5.42131 | overlap 329411 AGCTTGGGTTGGAGA TATT AAA AATA TTTTTTATGTGGTTG trpB 328878 - 330056 + | tryptophan synthase subunit beta trpA 330049 - 330798 + | tryptophan synthase subunit alpha C8J_0327 330869 - 331291 + | hypothetical protein fliN 331291 - 331599 + | flagellar motor switch protein TERM 380 332360 - 332319 - g 75 -4.2 -5.20633 | gap 1, opp_overlap 332317 332319 AAAAACAGAGAAAAA TTTTG-ATTCTTTTTTT GAAGAGAAT AAAAAAAGAATTCAAAA TCTTATAGAGCAGCG C8J_0329 331600 - 332397 + | hypothetical protein C8J_0330 333854 - 332394 - | Ppx/GppA family phosphatase TERM 381 332864 - 332852 - G 76 -6.3 -4.58283 | TAAGGGTTGTAAAAA TTTGC AGA GCAAA ATGTGGAGTTTTATT TERM 382 333395 - 333405 + g 72 -2.6 -5.4505 | opp_overlap 333395 GAGATATGCAAGAAA TAAT TCT ATTA TTTTTTATTAAACAC fdxB 334099 - 333854 - | ferredoxin, 4Fe-4S TERM 383 334210 - 334186 - R 71 -5.7 -4.52349 | opp_overlap 334188, overlap 334187 334188 AGAAATAAAGATAAA TTTTTTGCACC GAA GGTGCAAAATT GTTAAGATTTTTTAG TERM 384 334209 - 334187 - R 75 -9.2 -3.28969 | opp_overlap 334188, overlap 334186 334188 GAAATAAAGATAAAT TTTTTGCACC GAA GGTGCAAAAT TGTTAAGATTTTTTA TERM 385 334188 - 334208 + r 100 -12.7 -3.75617 | opp_overlap 334187 334186 334188 AAATAAAGATAAATT TTTTGCACC GAA GGTGCAAAA TTGTTAAGATTTTTT TERM 386 334208 - 334188 - R 95 -12.7 -2.55755 | opp_overlap 334188, overlap 334187 334186 AAATAAAGATAAATT TTTTGCACC GAA GGTGCAAAA TTGTTAAGATTTTTT C8J_0332 334883 - 334212 - | DNA-binding response regulator C8J_0333 335279 - 334962 - | FolB domain-containing protein C8J_0334 335872 - 335264 - | putative glycerol-3-phosphate acyltransferase PlsY TERM 387 335986 - 336008 + H 73 -3.6 -5.28942 | AGTATTAATTAATTG TAAATATTTT TTA ATAATATTTA TTTTTATTTAAGCTC TERM 388 336250 - 336271 + G 75 -7.4 -4.08394 | opp_overlap 336249 336250 TTACTCTTGAAAAAG TAGAGCTT GGCAAA AAGCTCTA TTTTGAACCACGTCT C8J_0335 336072 - 337097 + | putative cytochrome C551 peroxidase TERM 389 337101 - 337134 + F 90 -8.3 -4.68511 | opp_overlap 337107 337110, overlap 337107 CCTGAACTATAAGGT TCCAAACAAGCTCTA ATTT TAGAGCTTGTTTAAA TTTCTTTATCTTAGC TERM 390 337107 - 337128 + F 100 -11.7 -3.97446 | opp_overlap 337107 337110, overlap 337101 CTATAAGGTTCCAAA CAAGCTCTA ATTT TAGAGCTTG TTTAAATTTCTTTAT TERM 391 337128 - 337107 - f 91 -11.7 -3.58533 | opp_overlap 337107 337101, overlap 337110 CTATAAGGTTCCAAA CAAGCTCTA ATTT TAGAGCTTG TTTAAATTTCTTTAT TERM 392 337125 - 337110 - f 74 -7.6 -3.9243 | opp_overlap 337107 337101, overlap 337107 TAAGGTTCCAAACAA GCTCTA ATTT TAGAGC TTGTTTAAATTTCTT C8J_0336 337191 - 338528 + | phosphoglucosamine mutase lspA 338521 - 338991 + | lipoprotein signal peptidase C8J_0338 338975 - 339427 + | hypothetical protein C8J_0339 340770 - 339424 - | coproporphyrinogen III oxidase TERM 393 340857 - 340837 - H 71 -7.1 -3.88442 | TAAAATAGGAGTAAA TTTTTATTT CTT AAATAAAAA ATGGGATTAAGTTTT C8J_0340 340897 - 341148 + | hypothetical protein cmeC 342649 - 341171 - | RND efflux system, outer membrane lipoprotein CmeC TERM 394 342187 - 342202 + g 71 -9 -2.78032 | overlap 342186 342201 AGCTTGATTTTGAGG CGCGAT ATGT ATCGCG ATATTTTCCCCAAAG cmeB 345764 - 342642 - | RND efflux system, inner membrane transporter CmeB TERM 395 345615 - 345629 + g 71 -7.2 -3.70902 | overlap 345613 TGCATCAGCTCCTGT GTAAGT TGC ACTTAC TTTAACTGTAGGAGG cmeA 346867 - 345764 - | RND efflux system, membrane fusion protein CmeA TERM 396 346914 - 346897 - R 79 -5.7 -5.05577 | opp_overlap 346896, overlap 346891 AAATTAAATTAAAAA TTGTAAT TTTT ATTACAA AAATTTTTGGCTAAT C8J_0344 347594 - 346962 - | TetR family transcriptional regulator C8J_0345 348957 - 347581 - | iron-sulfur cluster-binding domain protein TERM 397 349200 - 349179 - g 77 -4.5 -5.22039 | opp_overlap 349183 CGTAAATTCAAAAAA CAAGTAGAT AGAA ATCTAGTTG TAACTGAAGTAAGAG rpsU 349116 - 349328 + | 30S ribosomal protein S21 TERM 398 349347 - 349336 - f 77 -7.2 -4.2803 | opp_overlap 349336 GACTCTAACCCAAAA GCCC GAAA GGGC TTTTTTTATATCTAC TERM 399 349336 - 349347 + F 100 -7.2 -5.76633 | opp_overlap 349336 GACTCTAACCCAAAA GCCC GAAA GGGC TTTTTTTATATCTAC TERM 400 349571 - 349581 + G 78 -6.8 -4.58466 | opp_overlap 349570 AATCAAGCAGCTAAT GCTC AAG GAGC TTTTGTAATTATCGA C8J_0347 349445 - 350050 + | hypothetical protein C8J_0348 350060 - 351229 + | glutathionylspermidine synthase family protein C8J_0349 351232 - 352167 + | 2-hydroxyacid dehydrogenase TERM 401 352510 - 352496 - g 89 -8.6 -4.56335 | AAAAAAATCAATAAA GCTATC AAA GATAGC AAACTTAAAGTTAAT C8J_0350 352157 - 352648 + | nucleotide-binding protein C8J_0351 352741 - 353133 + | hypothetical protein C8J_0352 353144 - 353968 + | hypothetical protein TERM 402 354752 - 354773 + GT 91 -4.5 -5.95946 | overlap 354768 ATGAATATTTAAATG CTTTTGGAG ATAT TTCTAAAAG TTTTTTTATTATTGA TERM 403 354985 - 354973 - gT 82 -4.1 -5.55695 | overlap 354975 CAACAAGATAAAAAA GTCCT AGA AAGAC TTCATTCTTGGGGTA TERM 404 355646 - 355636 - gT 72 -4 -5.06585 | overlap 355645 GAAAGCATACAAAAA GAAT TAA ATTC AAGTTTTGATAAAAG C8J_0354 356218 - 355616 - | hypothetical protein C8J_0353 353968 - 355680 + | AAA ATPase family protein TERM 405 356158 - 356135 - GT 85 -8.3 -4.26881 | opp_overlap 356134, overlap 356130 TTTTACAAAATCAAA GGCTTTTAT GATATG ATAAAAGCC ATAGATTAAACTTAT C8J_0355 357111 - 356218 - | putative sulfite oxidase subunit YedY C8J_0356 357846 - 357166 - | orotidine 5'-phosphate decarboxylase nusB 358241 - 357843 - | transcription antitermination protein NusB ribH 358705 - 358241 - | riboflavin synthase subunit beta kdsA 359517 - 358702 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 406 359308 - 359324 + g 71 -4.5 -4.83593 | CATACCAAATTCATC TTTTACG CTT TGTAAAA TTTTTAATCCTTCTT C8J_0360 360446 - 359514 - | integral membrane protein TERM 407 360775 - 360763 - g 81 -2.7 -5.82388 | AAATGTGAAAAAAAA CACTT TAA AAGTA GCTAAAGAAAGCGAT TERM 408 361227 - 361247 + G 70 -8.3 -3.16191 | overlap 361220 TTGTAAGTTCTATCG CAGGAACTA CTA TAGATCCTG TTAATGAAAGTGTAG C8J_0361 360548 - 361930 + | GTP-binding protein EngA aroK 361920 - 362414 + | shikimate kinase TERM 409 362588 - 362598 + G 75 -4.6 -5.055 | opp_overlap 362588, overlap 362596 CAAAATTCCTTAAAA GCTG CTG CGGC TTTTTTAAGCCTTGG trpS 362411 - 363370 + | tryptophanyl-tRNA synthetase TERM 410 364501 - 364490 - g 74 -3 -5.37865 | TGAACAAGGAAAAAA TGAA CTCG TTCA CACTCTTAATGGCTC serS 363381 - 364616 + | seryl-tRNA synthetase C8J_0365 364626 - 367088 + | TPR domain protein TERM 411 367121 - 367082 - T 100 -17.6 -3.7732 | opp_overlap 367092, overlap 367092 TTTTGATATTAATAA CAACTAAAAATGCTTAGA AATT TCTAAGCATTTTTAGTTA AGCTTGAAGATCTAG TERM 412 367092 - 367111 + T 100 -9.4 -4.87893 | opp_overlap 367082 367092 AATAACAACTAAAAA TGCTTAGA AATT TCTAAGCA TTTTTAGTTAAGCTT TERM 413 367111 - 367092 - T 100 -9.4 -5.03201 | opp_overlap 367092, overlap 367082 AATAACAACTAAAAA TGCTTAGA AATT TCTAAGCA TTTTTAGTTAAGCTT C8J_0366 367754 - 367119 - | hypothetical protein TERM 414 367817 - 367849 + r 100 -10.9 -4.79352 | opp_overlap 367814 367817 367819 367824, overlap 367811 AAAAATTTATAAGGA CATTAAATTCCTT ATTTTCA AAGGAATTTAATG TTTTATTGTAGATAA TERM 415 367849 - 367817 - R 82 -10.9 -2.8967 | opp_overlap 367811 367817, overlap 367814 367819 367824 AAAAATTTATAAGGA CATTAAATTCCTT ATTTTCA AAGGAATTTAATG TTTTATTGTAGATAA pyk 369294 - 367852 - | pyruvate kinase TERM 416 368632 - 368653 + g 74 -6.7 -4.35042 | opp_overlap 368620, overlap 368624 368633 AAATTTTTCAATTTT TGCAAAAAT AGAT ATTTTTGCG TTATTTTGTGCTAAA TERM 417 368855 - 368837 - G 70 -3.9 -5.0538 | TTTGAGTTTAAAAAA CCATCAT TTTCT ATAATGG TTTCAATTTTTTGAT C8J_0368 370689 - 369343 - | malate dehydrogenase (acceptor) C8J_0369 371437 - 370808 - | pantothenate kinase C8J_0370 371714 - 371424 - | hypothetical protein TERM 418 371662 - 371685 + g 87 -8.3 -4.69324 | opp_overlap 371659 ATACTTAAGTCATAG GGCTTTAAA TTTAAT TTTAAAGCC TTTATTGTTTGTTCT C8J_0371 372709 - 371711 - | putative lipoprotein C8J_0372 373284 - 372706 - | hypothetical protein TERM 419 373197 - 373180 - G 73 -5.7 -4.65446 | opp_overlap 373180, overlap 373173 AGCAGATATATAAAA TTTATAC TTGC GTATAAA TCTCTCTCCTTTGAT gatC 373428 - 373712 + | aspartyl/glutamyl-tRNA amidotransferase subunit C C8J_0374 373780 - 374343 + | cvpA family protein TERM 420 374576 - 374595 + G 74 -6.5 -4.4078 | opp_overlap 374560 374576 TTGCTTGAAGAAGCA GAAATGG TAACTT CCATTTC TTTTGGTTCAGCAGG fur 374345 - 374818 + | ferric uptake regulation protein TERM 421 375357 - 375375 + G 71 -2.4 -5.42259 | TAGTGCGTTCTAAAG TGGTGAGT TTG ATTCGTCA TTTTTTTGAAAATAA lysS 374819 - 376324 + | lysyl-tRNA synthetase glyA 376321 - 377565 + | serine hydroxymethyltransferase TERM 422 377581 - 377608 + G 74 -7.2 -3.88232 | gap 1, opp_overlap 377579, overlap 377583 TTTCACCAATGGATA TG-TCGCTAATTA AAA TAATTGGCGATCA TTATTATATAAGACG TERM 423 377583 - 377605 + G 77 -10 -3.01243 | opp_overlap 377579, overlap 377581 TCACCAATGGATATG TCGCTAATTA AAA TAATTGGCGA TCATTATTATATAAG C8J_0378 377562 - 378107 + | hypothetical protein TERM 424 378202 - 378184 - g 74 -5.4 -4.91084 | AATAAAAGTGAAAAA GTAAAAAA AAT TCTTTTAC GAGTTATTGCTTTAG C8J_0379 378121 - 378957 + | hypothetical protein TERM 425 379019 - 379047 + G 76 -7.6 -3.87373 | gap 1, opp_overlap 379010 379013 379019, overlap 379010 379040 TAGAATGCATAATAA TGCTATTAATGCC TTAG GGC-TTGATAGCA TTTATACACGCTATC aroE 378954 - 379742 + | shikimate 5-dehydrogenase TERM 426 379764 - 379776 + T 80 -4.9 -5.36441 | overlap 379754 AGTTATTTTTTTGTA TAAGA AAA TCTTA TTTTTTGTGTGAGAA TERM 427 379782 - 379810 + T 71 -6.1 -4.54821 | overlap 379783 379784 GAAAATCTTATTTTT TGTGTGAGAAAGT TTA ATTTTCTCACAAG TTTTATCATTCAAAT TERM 428 379784 - 379808 + T 82 -10.9 -2.5882 | overlap 379783 379782 AAATCTTATTTTTTG TGTGAGAAAGT TTA ATTTTCTCACA AGTTTTATCATTCAA C8J_0381 380715 - 379816 - | putative lipoprotein lgt 380805 - 381620 + | prolipoprotein diacylglyceryl transferase frdC 381689 - 382471 + | fumarate reductase cytochrome b-556 subunit TERM 429 383874 - 383855 - g 74 -8 -3.86975 | overlap 383850 AGAAGGTAAACATAA TGTTTTTG AAAT CAAAAACA GAATGAAAGAAATCA frdA 382455 - 384446 + | fumarate reductase frdB 384439 - 385164 + | fumarate reductase iron-sulfur subunit TERM 430 385166 - 385189 + F 77 -9 -3.30338 | gap 1, opp_overlap 385166, overlap 385168 AAAGAAATAAATAAA TCTTTCCCCTT TTT AAGGGG-AAGA TTATGAAAGAATTAT TERM 431 385189 - 385166 - f 93 -9 -4.88895 | gap 1, opp_overlap 385166 385168 AAAGAAATAAATAAA TCTTTCCCCTT TTT AAGGGG-AAGA TTATGAAAGAATTAT TERM 432 385168 - 385188 + F 81 -10.5 -2.57881 | opp_overlap 385166, overlap 385166 AGAAATAAATAAATC TTTCCCCTT TTT AAGGGGAAG ATTATGAAAGAATTA TERM 433 385734 - 385748 + G 70 -3.6 -5.07107 | opp_overlap 385722 AAGCCTTTTAAATGC TCTTTT AAA AGAAGA TTTTTTAGGCGTTTC TERM 434 385979 - 385967 - g 76 -7.7 -3.94773 | overlap 385960 CTTTAATACAAAATA TCGCA CTT TGCGA GCTTAAAAATTTCAG C8J_0386 385192 - 387378 + | GTP-binding protein TERM 435 387794 - 387782 - g 72 -6.3 -4.34912 | opp_overlap 387782 387781, overlap 387779 AATGAAGTAAAACAA GCAAA AAG TTTGC ATATTTTTGCACCTA C8J_0387 387368 - 389197 + | GTP-binding protein TERM 436 389692 - 389714 + G 75 -4.1 -5.20333 | opp_overlap 389683 389692 GGAGAACTTGTTAAA GCAAGTGTA AAATC TGCTCTTGC TTTTTATTCTAAATC C8J_0388 389197 - 389901 + | hypothetical protein TERM 437 389888 - 389909 + F 76 -6.7 -4.5287 | opp_overlap 389888 TTAATTCTAAAGATA TAGAGCTTT ATTA AAAGTTCTA TTTTCATTACTTTCA TERM 438 389996 - 390008 + F 70 -6.3 -4.04773 | opp_overlap 389987 389996 389995, overlap 389985 AATTTATATTAATAG GACTA ATA TAGTC TTGTTTAAATTATTA C8J_0389 390037 - 390765 + | hypothetical protein C8J_0390 390767 - 392488 + | oxidoreductase, putative TERM 439 392488 - 392528 + F 77 -5 -5.17786 | gap 1, opp_overlap 392495, overlap 392489 392492 392494 392495 AAAAAGCTTAGCTTG ATAATAA-CTTGAGAGTTT TTGA AAACTCTCAAGATTATAAA TTTTTAATTTTCTTC TERM 440 392489 - 392527 + F 79 -8.5 -3.68231 | gap 1, opp_overlap 392495, overlap 392488 392492 392494 392495 AAAAGCTTAGCTTGA TAATAA-CTTGAGAGTTT TTGA AAACTCTCAAGATTATAA ATTTTTAATTTTCTT TERM 441 392492 - 392524 + F 79 -10.2 -2.91298 | gap 1, opp_overlap 392495, overlap 392489 392488 392494 392495 AGCTTAGCTTGATAA TAA-CTTGAGAGTTT TTGA AAACTCTCAAGATTA TAAATTTTTAATTTT TERM 442 392494 - 392521 + F 84 -10 -3.56762 | opp_overlap 392495, overlap 392492 392489 392488 392495 CTTAGCTTGATAATA ACTTGAGAGTTT TTGA AAACTCTCAAGA TTATAAATTTTTAAT TERM 443 392495 - 392520 + F 100 -13.5 -2.72973 | opp_overlap 392495, overlap 392494 392492 392489 392488 TTAGCTTGATAATAA CTTGAGAGTTT TTGA AAACTCTCAAG ATTATAAATTTTTAA TERM 444 392520 - 392495 - f 100 -13.5 -3.79906 | opp_overlap 392494 392492 392489 392488 392495 TTAGCTTGATAATAA CTTGAGAGTTT TTGA AAACTCTCAAG ATTATAAATTTTTAA C8J_0391 392659 - 392757 + | hypothetical protein C8J_0392 392777 - 392983 + | hypothetical protein TERM 445 392983 - 392995 + T 74 -6.3 -4.55295 | AGACATGTCCGTTTA GCTTT AAA AAAGC TTTATTTATAAGGAA C8J_0393 393750 - 393046 - | hypothetical protein C8J_0394 393857 - 394219 + | HIT family protein TERM 446 394242 - 394256 + F 72 -4.4 -5.0916 | opp_overlap 394252, overlap 394252 TAATGATTTGTTATG TTTTAT CTA ATAAAA TTTTTATATTGAAAA C8J_0395 394293 - 394865 + | hypothetical protein TERM 447 394873 - 394895 + T 95 -11.4 -4.10363 | AAAAATAATTTTTTA GTCTAAGAGT CTT GCTCTTAGAC TTTGTAAATTTTTAT C8J_0396 395826 - 394870 - | hypothetical protein C8J_0397 396096 - 395887 - | hypothetical protein C8J_0398 396263 - 396685 + | hypothetical protein C8J_0399 396937 - 397290 + | putative lipoprotein TERM 448 397287 - 397322 + F 100 -13.6 -4.08216 | opp_overlap 397288 397291, overlap 397288 397291 TGTAGAAATTACCAG ATAACTTTTTAAGGCA AAAA TGCCTTAAAAAGTTAA TTTTGAGGAGACTGG TERM 449 397321 - 397288 - f 100 -17.1 -2.90798 | opp_overlap 397287 397288 397291, overlap 397291 GTAGAAATTACCAGA TAACTTTTTAAGGCA AAAA TGCCTTAAAAAGTTA ATTTTGAGGAGACTG TERM 450 397288 - 397321 + F 100 -17.1 -3.04715 | opp_overlap 397288 397291, overlap 397287 397291 GTAGAAATTACCAGA TAACTTTTTAAGGCA AAAA TGCCTTAAAAAGTTA ATTTTGAGGAGACTG TERM 451 397318 - 397291 - f 100 -14.4 -3.58802 | opp_overlap 397288 397287 397291, overlap 397288 GAAATTACCAGATAA CTTTTTAAGGCA AAAA TGCCTTAAAAAG TTAATTTTGAGGAGA TERM 452 397291 - 397318 + F 100 -14.4 -3.66908 | opp_overlap 397291 397288, overlap 397288 397287 GAAATTACCAGATAA CTTTTTAAGGCA AAAA TGCCTTAAAAAG TTAATTTTGAGGAGA C8J_0400 397340 - 397807 + | hypothetical protein TERM 453 397820 - 397803 - f 75 -4.3 -5.2189 | overlap 397808 TTAACTATCAAAAAA TTTAATT TTAA AATTAAA AATTCAAGCCTTTTT TERM 454 398308 - 398324 + G 76 -6.7 -4.39989 | GAAAAAATTTTAAGT TCTTTAA AGA TTAAAGA TTTTGATGCTTTGAT C8J_0401 397885 - 399462 + | ABC transporter ATP-binding protein C8J_0402 399455 - 399787 + | hypothetical protein C8J_0403 399863 - 400246 + | hypothetical protein TERM 455 400247 - 400274 + T 93 -10.8 -3.90291 | gap 1, opp_overlap 400247 400253, overlap 400248 400253 TTGAACGCAATTTAA T-CAAAAGCTCCA TTT TGGAGCTTTTGTA TTTACTTGCAAGAAT TERM 456 400273 - 400247 - T 91 -12.4 -3.20991 | opp_overlap 400247 400248 400253, overlap 400253 TTGAACGCAATTTAA TCAAAAGCTCCA TTT TGGAGCTTTTGT ATTTACTTGCAAGAA TERM 457 400248 - 400272 + T 100 -15.9 -3.54146 | opp_overlap 400247 400253, overlap 400247 400253 TGAACGCAATTTAAT CAAAAGCTCCA TTT TGGAGCTTTTG TATTTACTTGCAAGA TERM 458 400253 - 400267 + T 100 -10 -4.84539 | opp_overlap 400247 400253, overlap 400248 400247 GCAATTTAATCAAAA GCTCCA TTT TGGAGC TTTTGTATTTACTTG TERM 459 400267 - 400253 - T 91 -10 -4.45664 | opp_overlap 400253 400248 400247, overlap 400247 GCAATTTAATCAAAA GCTCCA TTT TGGAGC TTTTGTATTTACTTG C8J_0404 400874 - 400290 - | hypothetical protein TERM 460 400464 - 400444 - G 74 -6.3 -4.39347 | overlap 400445 AAAAAATATTCAAAA CGATTTAAA TTT TTTAAATCA ATAGCAATGGATATA TERM 461 401894 - 401911 + G 93 -5.7 -5.69023 | opp_overlap 401886 401893 TAAGGTATAAAATCT TTATAGA ATGT TCTATAA TTTTTTTGATATTTT C8J_0405 401002 - 402228 + | hypothetical protein TERM 462 402799 - 402789 - g 75 -4 -5.22312 | ATGCATATGAAAAAA CTTT AGC AAAG AATAATTCAGATTGC C8J_0406 402221 - 402958 + | hypothetical protein TERM 463 403144 - 403174 + T 72 -3.4 -5.30686 | opp_overlap 403168, overlap 403145 ATTTTATAAATTAAC TCTTTTGGTTTTTA TCT TATAAACTAAAAGC TTTTTTATAAATCTT TERM 464 403391 - 403369 - T 72 -4.3 -4.99435 | opp_overlap 403369 TCTAATAATGAAAAA GATTAAAAA CTTTT CTTTTAATC TTTCATAACTTTTTC TERM 465 403419 - 403400 - T 72 -8 -3.31322 | TTTAATCTTTCATAA CTTTTTCT TTGA AGAAAAAG ATTAAACTATCTATA TERM 466 403456 - 403419 - T 72 -4.3 -5.06414 | opp_overlap 403426 TTCTTTGAAGAAAAA GATTAAACTATCTATAA TTTT TTATGGAGAGTTTGATC CTGGCTCAGAGTGAA TERM 467 403513 - 403530 + T 70 -8.5 -2.56596 | opp_overlap 403513 403512 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 468 403530 - 403513 - T 70 -8.5 -2.56343 | opp_overlap 403513, overlap 403512 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 469 404918 - 404935 + T 74 -9.1 -3.07291 | opp_overlap 404918 GTCGTAACAAGGTAA CCGTAGG AGAA CCTGCGG TTGGATCACCTCCTT TERM 470 405253 - 405237 - T 90 -5.9 -5.46657 | GATTTGAATAAAAAA GCTTTAA AAT CTAAAGC AAGTATATAAAGTAG TERM 471 405406 - 405426 + T 78 -6.9 -4.56187 | overlap 405408 TAATATATATACTTC CTTTAGGTT TTA AACCTAATG TTCTTTTTAATTATC TERM 472 405408 - 405424 + T 79 -8.1 -3.86437 | overlap 405406 ATATATATACTTCCT TTAGGTT TTA AACCTAA TGTTCTTTTTAATTA TERM 473 406023 - 406006 - T 91 -11.3 -3.66803 | opp_overlap 406005 406004, overlap 405999 GCGCAAGAGGGCAAA CCCAGTG CTTG CACTGGG GGTTGTAGGACTGCA TERM 474 408715 - 408725 + T 70 -5.4 -4.57341 | AATAAAGCATCACTT CCTT GTT AAGG TTTTTAAGAAGACTT murD 410479 - 409271 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 475 409850 - 409864 + g 70 -5 -4.6759 | TTTTTCATCTTTATA GCTTAT TTT ATGAGC TTTTGTTGGAGTATT mraY 411540 - 410479 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 476 411104 - 411084 - G 74 -5.3 -4.98758 | AAAAAGGTATAAAAA GTTCCGTGC TAA GCTCTGAAC TAAAATATAAAGGTA TERM 477 411159 - 411184 + g 70 -5.5 -4.2757 | gap 1 TTTGTGCTAAAAGCT TCATTCTTGGAC TAA GTCCT-GAATGA TTATCTTTTTTTAGA TERM 478 411484 - 411472 - G 75 -4.1 -5.33866 | TAAAGCGATAAAAAA TGCAA ATC CTGCA CGCACACTAATATAA TERM 479 412881 - 412870 - g 72 -4.4 -5.06103 | opp_overlap 412870 412865 AGAATGTGCAAAAAA GCAT GATT ATGC TTTTATCATTACAAG pgm 411620 - 413098 + | phosphoglyceromutase fabG 413170 - 413913 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 480 414071 - 414047 - g 70 -5.1 -4.60797 | TTGTGAGAGATAAAA TTTATTTTTGC ACA GCAAATACAAA AGGACTTTTTAAGCA C8J_0411 413923 - 414330 + | hypothetical protein TERM 481 414392 - 414351 - f 75 -9.3 -3.19653 | gap 1, opp_overlap 414351 414352 414356, overlap 414356 414358 414362 414366 TGATAATTTTATTAA CTATATATTAATTAAGATAA ATA TTATCTTAATTAATAT-TAA CTTTTTGTTATTTTT TERM 482 414351 - 414393 + F 88 -5.2 -5.54403 | opp_overlap 414351 414356 414358 414362 414366, overlap 414352 414356 TGATAATTTTATTAA CTATATATTAATTAAGATAA ATA TTATCTTAATTAATATTAAC TTTTTGTTATTTTTT TERM 483 414352 - 414392 + F 82 -8.7 -3.87151 | opp_overlap 414351 414356 414358 414362 414366, overlap 414351 414356 GATAATTTTATTAAC TATATATTAATTAAGATAA ATA TTATCTTAATTAATATTAA CTTTTTGTTATTTTT TERM 484 414388 - 414356 - f 100 -13.9 -2.93901 | opp_overlap 414352 414351 414356, overlap 414351 414358 414362 414366 ATTTTATTAACTATA TATTAATTAAGATAA ATA TTATCTTAATTAATA TTAACTTTTTGTTAT TERM 485 414356 - 414388 + F 100 -13.9 -3.53262 | opp_overlap 414356 414351 414358 414362 414366, overlap 414352 414351 ATTTTATTAACTATA TATTAATTAAGATAA ATA TTATCTTAATTAATA TTAACTTTTTGTTAT TERM 486 414386 - 414358 - f 91 -12.1 -3.02096 | opp_overlap 414356 414352 414351, overlap 414356 414351 414362 414366 TTTATTAACTATATA TTAATTAAGATAA ATA TTATCTTAATTAA TATTAACTTTTTGTT TERM 487 414382 - 414362 - f 75 -8.5 -3.35278 | opp_overlap 414356 414352 414351, overlap 414358 414356 414351 414366 TTAACTATATATTAA TTAAGATAA ATA TTATCTTAA TTAATATTAACTTTT TERM 488 415129 - 415163 + G 72 -8.6 -2.98545 | overlap 415131 CAAGGTGGAGTAGCT CAGCGTTTAATGGGAG GAG CTTCTAAGAAACGCTG TAATTATTCTGCAGA sdhA 414667 - 416502 + | succinate dehydrogenase flavoprotein subunit TERM 489 416594 - 416623 + G 72 -8.1 -3.36283 | overlap 416592 AAAAACTCTGCTCTC TCTTTTGCTTTTT ATTA AAAAAACAAAAGA TATTACTTTAAATTT sdhB 416499 - 417464 + | succinate dehydrogenase, iron-sulfur protein subunit sdhC 417468 - 418325 + | putative succinate dehydrogenase subunit C TERM 490 418347 - 418329 - T 100 -10.3 -4.90296 | opp_overlap 418329 AAAATTGCATAAAAA CATGGGC AAAAA GCCCATG TTTAAAGATTTAATT TERM 491 418329 - 418347 + T 84 -10.3 -3.65084 | opp_overlap 418329 AAAATTGCATAAAAA CATGGGC AAAAA GCCCATG TTTAAAGATTTAATT C8J_0415 419014 - 418349 - | TenA/Thi-4 family protein acpP 419127 - 419360 + | acyl carrier protein fabF 419386 - 420600 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 492 420720 - 420709 - g 71 -3 -5.28942 | GATTTTAAAGAAAAA TCTT GAAA AAGA AATTTCTAAAACTTA accA 420602 - 421540 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 493 421687 - 421669 - f 70 -7.6 -3.52204 | TTATTTTTAAAGGAA TTAATTTG ACT CAAATTAA AAATATGAAATTTAA C8J_0419 421674 - 423746 + | hypothetical protein C8J_0420 423829 - 424416 + | NUDIX domain protein TERM 494 424423 - 424455 + T 73 -9.3 -2.89117 | opp_overlap 424420 424423 424434, overlap 424422 AAATATTAAAGATTA TTTAGGTTAAACCTT AAA AAGGTTCAACCTAGG ATTTAATGATCTGAT C8J_0421 425555 - 424458 - | putative MCP-type signal transduction protein TERM 495 424900 - 424888 - G 76 -6.3 -4.57341 | AATTTTTCGGAAAAA CTCAT AAT ATGAG CATTAGAATCTATAG C8J_0422 425780 - 425565 - | hypothetical protein TERM 496 425962 - 425944 - R 77 -7.5 -4.24002 | opp_overlap 425943 425939 425960 TTGGAAATTTTAAAA TTGAGGA ATAAA TCCTCAA AATTATTTAGAATTT TERM 497 425960 - 425979 + r 76 -3.7 -5.48303 | opp_overlap 425944, overlap 425943 425939 TGAGGAATAAATCCT CAAAATT ATTTAG AATTTTG TTTTTTTAGAGTTCT rpmB 426159 - 425965 - | 50S ribosomal protein L28 TERM 498 426070 - 426086 + g 72 -4.5 -4.90079 | TGTTCTGAGATTAGG TAAAAAG CGT CTTTTTG TTTTATTGTTAGCAT rpe 426299 - 426946 + | ribulose-phosphate 3-epimerase TERM 499 427400 - 427412 + G 73 -5.5 -4.53685 | overlap 427399 ACAGTATTTTTGTAG CGCAT AAT GTGCG TTTTGATTATAGTTT dnaQ 426943 - 427704 + | DNA polymerase III subunit epsilon thiC 427887 - 429179 + | thiamine biosynthesis protein ThiC C8J_0427 429689 - 429171 - | hypothetical protein C8J_0428 430206 - 429679 - | hypothetical protein TERM 500 429771 - 429723 - G 95 -12 -3.39449 | opp_overlap 429727 429728 429731 429736 429767, overlap 429728 GTTTACTAATACTAA CAAAACGATACCACCCATTATC TAAGC GATAATAGGTTGTATAGCTTTG ATCAAAGATGCTTTT TERM 501 429766 - 429728 - G 87 -8.3 -4.78753 | opp_overlap 429727 429728 429731 429736, overlap 429723 CTAATACTAACAAAA CGATACCACCCATTATC TAAGC GATAATAGGTTGTATAG CTTTGATCAAAGATG TERM 502 429821 - 429843 + g 72 -7 -4.11371 | AGAGTAAACATTTCT CTTGTAGGAG TGA CTCCGATAAG TTTTAAGGAATATTC C8J_0429 431162 - 430203 - | hypothetical protein TERM 503 430531 - 430555 + g 72 -8.7 -2.89822 | opp_overlap 430536, overlap 430526 430536 TTATTTAAGGCTTCA TTGAAGTTATC TAA GGTAACTTCAG TATCATCGTTGTTGT TERM 504 431026 - 431038 + g 77 -4.9 -5.30155 | TCTAATAAATTTTCA CTTTT ATC AAAAG TTTTTTCATTGCTAC C8J_0430 431745 - 431164 - | hypothetical protein miaB 433078 - 431777 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 505 431948 - 431930 - G 72 -7.6 -3.57561 | opp_overlap 431930 TCTTAATTCTTCAAA TAAAACTT TAA AAGTTTTA TTTTCTTGTTTTTTT TERM 506 431930 - 431948 + g 90 -7.6 -5.25154 | opp_overlap 431930 TCTTAATTCTTCAAA TAAAACTT TAA AAGTTTTA TTTTCTTGTTTTTTT TERM 507 432254 - 432268 + g 70 -5.6 -4.24404 | opp_overlap 432254 CCATTCTTTAGTATA GCCACG TTT CATGGC TTTTAAAATTTCACT C8J_0432 433317 - 433075 - | hypothetical protein TERM 508 433118 - 433130 + g 72 -7.7 -3.55447 | opp_overlap 433117 433106 TCATTATCATCAAGT CCGTA TTT TACGG TTCTATGATAAATGC TERM 509 434367 - 434347 - g 71 -2 -5.48063 | gap 1 ATTGAAGATAAAAAA GCTATTGTA AGTT TA-AATAGC GAACAAAAAAGCAAA nusA 433444 - 434532 + | transcription elongation factor NusA TERM 510 434556 - 434535 - T 86 -8.9 -4.43272 | opp_overlap 434535 ATTTAAAATTTAAAA TATTTGTGA ATTT TCACAAATA TTTTTTATAAAACCA TERM 511 434535 - 434556 + T 100 -8.9 -5.24129 | opp_overlap 434535 ATTTAAAATTTAAAA TATTTGTGA ATTT TCACAAATA TTTTTTATAAAACCA C8J_0434 435735 - 434548 - | putative integral membrane protein TERM 512 435209 - 435192 - G 75 -4.9 -5.0917 | TTACTAAAAAAGAAA TGCCTAT GAGT ATAAGCA TGCAGTCAAATAAAA TERM 513 435482 - 435468 - G 76 -2.9 -5.57729 | AAATAAGACAAAAAA TAGAA ATTAA TTCTA TACTAATCATATTGA C8J_0435 435810 - 436856 + | hypothetical protein TERM 514 437522 - 437512 - g 74 -5.4 -4.88407 | TGAGTTAAGCAAAAA CATC AAA GATG AAATTTTGGTACGCC TERM 515 437612 - 437622 + G 72 -5.4 -4.73677 | AAGGATTTATATCTT GCAA AAA TTGC TTTATTTGTTCTAGG C8J_0436 436856 - 438076 + | zinc protease-like protein TERM 516 438115 - 438138 + G 75 -7.5 -4.18018 | opp_overlap 438115 438113, overlap 438118 AAAAATTAAAAATTA GAAGTGCTA TTGATT TAGCGCTTC TTTTACCTAAAAAAA TERM 517 438279 - 438289 + G 72 -4 -5.06052 | TGTGAAGAATGGCAA GAAA ATA TTTC TTTTGTATTTTTTCA TERM 518 439887 - 439863 - g 79 -5.8 -5.15117 | opp_overlap 439865, overlap 439865 GAAAAGGTGAAAAAA GATTTGGCAA AAAAA TTGCCAAATT AATGTCCACCATATT recG 438066 - 439889 + | ATP-dependent DNA helicase RecG TERM 519 439865 - 439885 + T 73 -8.4 -3.2614 | opp_overlap 439863 439865 AAAGGTGAAAAAAGA TTTGGCAA AAAAA TTGCCAAA TTAATGTCCACCATA TERM 520 439885 - 439865 - T 83 -8.4 -4.18259 | opp_overlap 439865, overlap 439863 AAAGGTGAAAAAAGA TTTGGCAA AAAAA TTGCCAAA TTAATGTCCACCATA C8J_0438 440269 - 439886 - | hypothetical protein TERM 521 440623 - 440653 + G 82 -8.6 -3.89346 | opp_overlap 440623 AGGAAGATGGAGAAA TTTTGGAAATTGAT TTT ATTAATTTTCAAAA TTTATGCAGTGAAAA C8J_0439 440364 - 440960 + | putative transcriptional regulator C8J_0440 440977 - 441678 + | amino acid ABC transporter permease C8J_0441 441671 - 442327 + | amino acid ABC transporter permease C8J_0442 442329 - 443066 + | amino acid ABC transporter ATP-binding protein TERM 522 443223 - 443207 - f 70 -8.7 -2.62616 | opp_overlap 443198 443219 443222 TCAGTTGGTAGAGCA GCTGCCT TGT AAGCAGC AGGTCGGGGGTTCAA TERM 523 443620 - 443604 - f 82 -10.9 -2.65815 | opp_overlap 443595 CTCAGAGGTAGAGCA CTCCCTT GGT AAGGGAG AGGTCGCGGGTTCAA TERM 524 444514 - 444494 - g 77 -8.3 -3.78962 | overlap 444497 TTAAAGATACTCAAA CAACAACTG TAA CAGGTGTTG AAATGTTCAGAAAAG tuf 443722 - 444921 + | elongation factor Tu TERM 525 444929 - 444911 - f 70 -6.2 -4.07568 | opp_overlap 444911 444926 444927, overlap 444927 GTGTTGTTTCTAAAA TTATTAAA TAA TTTAATAA AGCCAAGTTAAAAGC TERM 526 444926 - 444954 + F 100 -9.7 -5.00884 | opp_overlap 444911 444927 444931, overlap 444927 TTATTAAATAATTTA ATAAAGCCAAGTT AAA AGCTTGGCTTTAA TTTTTTAAGGAAAAT TERM 527 444927 - 444953 + F 100 -13.2 -3.60048 | opp_overlap 444911 444927 444931, overlap 444926 TATTAAATAATTTAA TAAAGCCAAGTT AAA AGCTTGGCTTTA ATTTTTTAAGGAAAA TERM 528 444953 - 444927 - f 87 -11 -3.3458 | opp_overlap 444926 444927, overlap 444911 444931 TATTAAATAATTTAA TAAAGCCAAGTT AAA AGCTTGGCTTTA ATTTTTTAAGGAAAA TERM 529 444949 - 444931 - f 77 -7.4 -4.29977 | opp_overlap 444927 444926, overlap 444927 AAATAATTTAATAAA GCCAAGTT AAA AGCTTGGC TTTAATTTTTTAAGG rpmG 444974 - 445132 + | 50S ribosomal protein L33 TERM 530 445272 - 445248 - g 72 -4.5 -4.88295 | AAATAAATGGAAAAA TTAATAACTTA TTT TAAATTATCAA AAGCCGAATTAAGGA secE 445239 - 445418 + | preprotein translocase subunit SecE TERM 531 445823 - 445811 - g 72 -6.3 -4.24123 | TGAAGAAGGGGAAAA TGTGA GAA TCACA GAAGGGCCATTTGCA TERM 532 445932 - 445956 + G 75 -7.3 -4.18042 | ACTCCAGTGGAGATC TTATATTCTCA AGT TGAGAAAATAA TTTAATTTATATCAA nusG 445428 - 445961 + | transcription antitermination protein NusG rplK 445987 - 446412 + | 50S ribosomal protein L11 TERM 533 446436 - 446414 - f 70 -8.5 -2.56743 | overlap 446413 AAATCGTAGATTAAT CCTTTCACC GCCAA GGTAAAAGG CGGTAGCACTTTAAA rplA 446467 - 447168 + | 50S ribosomal protein L1 TERM 534 447169 - 447188 + F 89 -7.9 -4.78237 | opp_overlap 447169 CTTGATATGAAATAA GAGTTGC TTTTTT GCAACTC TTTTGTTCTAAAATA TERM 535 447188 - 447169 - f 80 -7.9 -4.04806 | opp_overlap 447169 CTTGATATGAAATAA GAGTTGC TTTTTT GCAACTC TTTTGTTCTAAAATA TERM 536 447202 - 447240 + F 82 -7.8 -4.27584 | opp_overlap 447202, overlap 447206 TCTTTTGTTCTAAAA TAAACATTTGAAAAAATT TTT GATTTTTTGAGATGTTTA TTTTAGATTGAAGAT rplJ 447320 - 447799 + | 50S ribosomal protein L10 TERM 537 448174 - 448159 - g 72 -4 -5.17576 | GAGGAAGCTAAAAAA CAACTT GAAG AAGCTG GTGCTAAAGTAGAAC rplL 447820 - 448197 + | 50S ribosomal protein L7/L12 TERM 538 448219 - 448242 + F 100 -6.8 -6.20267 | opp_overlap 448219 GCTTTAAAGTTAGAA GAAGATTTGT CAAG GCAAGTCTTC TTTTTTTATTTTTAC TERM 539 450931 - 450919 - g 72 -6.3 -4.23379 | opp_overlap 450919, overlap 450916 AATGTAAAAGAAGAA GATGT TGC ACATC TTGATGAGAGCGGTA TERM 540 451454 - 451440 - g 79 -5.8 -5.1101 | opp_overlap 451428, overlap 451428 CGATGATTTAAAAAA TCATTT CCA AAATGA GAAGAAAAAATTAAA TERM 541 451601 - 451589 - g 71 -5.5 -4.37658 | AAGTCGGTGATAAAA TGGCA GGA CGCCA CGGAAACAAAGGTAT rpoB 448315 - 452442 + | DNA-directed RNA polymerase subunit beta TERM 542 453676 - 453665 - g 72 -4.4 -5.11112 | AAACTTGAAGAAAAA GGTT ATGC AACC ACAGTAAAACAAGCT TERM 543 455050 - 455040 - g 75 -4 -5.1971 | AGGAAAAAGCAAAAA TTCT TGG AGAA AGCGGTATAAAAAGT TERM 544 456164 - 456140 - g 70 -5.7 -4.28361 | GTAATCGCAGGAAAA GGTGATAAGGC TGT GCGTTATCAGC TTGAACCAAAAACCG rpoC 452435 - 456988 + | DNA-directed RNA polymerase, beta' subunit TERM 545 456999 - 457018 + F 93 -10.8 -4.45765 | opp_overlap 456986 456993 AATAAAACTCTATTT TATAGCCC TTCT GGGCTATA TTTCTTCATTTTCAA TERM 546 457169 - 457150 - g 70 -3.6 -5.10077 | overlap 457152 AAAGAGCGCAAAAAA GTTTTAGA AAAA TCTAAATC TCCAGCGCTTAAAAA rpsL 457108 - 457494 + | 30S ribosomal protein S12 rpsG 457564 - 458034 + | 30S ribosomal protein S7 fusA 458047 - 460122 + | elongation factor G TERM 547 460130 - 460145 + F 93 -10.4 -4.10164 | ACGGTTAAATTTTTA GCGGGA TTTT TCCCGC TTTCTGTCCTCGTAG C8J_0456 460245 - 460394 + | hypothetical protein TERM 548 460933 - 460914 - g 88 -4.4 -5.71295 | gap 1, overlap 460917 ATATAAAAATAAAAA TAACAAAGC TTT GCTTTG-TA CATACACATCAAAAC TERM 549 460931 - 460917 - g 93 -8.6 -4.855 | overlap 460914 TAAAAATAAAAATAA CAAAGC TTT GCTTTG TACATACACATCAAA C8J_0457 460400 - 461101 + | hypothetical protein TERM 550 461248 - 461236 - gf 70 -6.3 -4.02534 | ATTTAAATTTAGAAA GCAAA GAA TTTGC TGAAAAATACTTGAG C8J_0458 461091 - 461465 + | hypothetical protein TERM 551 461847 - 461836 - gf 78 -4.4 -5.4505 | GCTTTTAACAAAAAA GGAT AGTG ATCC TAGAAATTTAGAGCT C8J_0459 461438 - 462715 + | putative lipoprotein trpC 462712 - 463488 + | indole-3-glycerol phosphate synthase TERM 552 463939 - 463957 + G 74 -6.1 -4.4267 | GGTACTAATATCGAG CAAGTTT ATCAA AAACTTG TTTTGGCTTTTAAAA C8J_0461 463498 - 463983 + | Hit family protein TERM 553 464541 - 464531 - g 70 -5.4 -4.68424 | opp_overlap 464533 CAACCTACGCAAAAA GCTT TTG AAGC AGAACTTTTTCACAA TERM 554 464560 - 464580 + G 86 -9.9 -3.73224 | opp_overlap 464559 464557 464560 464575 ACTTTTTCACAATAT GCAAAATTT AGA AAATTTTGC TTTCATAGAAAGTGA TERM 555 464580 - 464560 - g 75 -9.9 -2.52742 | opp_overlap 464560, overlap 464559 464557 464575 ACTTTTTCACAATAT GCAAAATTT AGA AAATTTTGC TTTCATAGAAAGTGA C8J_0462 463973 - 464977 + | tRNA 2-selenouridine synthase TERM 556 466281 - 466269 - g 77 -4.9 -5.22104 | TAAAAAACAATAAAA TCTTT ATC AAAGA TGCTAATATGATTAT TERM 557 467241 - 467229 - g 71 -4.9 -4.78237 | opp_overlap 467229 467233, overlap 467233 CAGCTTATAATAAAA TCATT ATC AATGA TACTTTATTTGGTGT C8J_0463 465716 - 467584 + | hypothetical protein C8J_0464 467675 - 467986 + | hypothetical protein TERM 558 468014 - 467988 - f 77 -5.2 -4.91778 | opp_overlap 467989 467991 468009 468012, overlap 467989 467991 468004 468006 468009 468012 CAAAGATAAAATAAA TCATTCCTATCT TAA AGATAGGAATCT TTTGCTTGTATTTTT TERM 559 468013 - 467989 - f 77 -8.7 -3.52627 | opp_overlap 467989 467991 468009 468012, overlap 467988 467991 468004 468006 468009 468012 AAAGATAAAATAAAT CATTCCTATCT TAA AGATAGGAATC TTTTGCTTGTATTTT TERM 560 467989 - 468013 + F 90 -8.7 -4.6008 | opp_overlap 467989 467988 467991 468004 468006 468009 468012, overlap 467991 468009 468012 AAAGATAAAATAAAT CATTCCTATCT TAA AGATAGGAATC TTTTGCTTGTATTTT TERM 561 467991 - 468011 + F 95 -11.3 -3.87807 | opp_overlap 467989 467988 467991 468004 468006 468009, overlap 467989 468009 AGATAAAATAAATCA TTCCTATCT TAA AGATAGGAA TCTTTTGCTTGTATT TERM 562 468011 - 467991 - f 87 -11.3 -3.29782 | opp_overlap 467991 467989 468009, overlap 467989 467988 468004 468006 468009 AGATAAAATAAATCA TTCCTATCT TAA AGATAGGAA TCTTTTGCTTGTATT TERM 563 468053 - 468006 - f 87 -11 -3.38046 | opp_overlap 467991 467989 468009 468012 468051, overlap 467991 467989 467988 468004 468009 468012 468046 TTCCTATCTTAAAGA TAGGAATCTTTTGCTTGTATTT TTAT AAATATAAACAAAAGATTCTTA AATCTTAATCTTACA TERM 564 468009 - 468050 + F 100 -12.7 -3.21464 | opp_overlap 467991 467989 467988 468006 468004 468009 468012 468046, overlap 467991 467989 468012 CTATCTTAAAGATAG GAATCTTTTGCTTGTATTT TTAT AAATATAAACAAAAGATTC TTAAATCTTAATCTT TERM 565 468050 - 468009 - f 95 -12.7 -2.55297 | opp_overlap 467991 467989 468009 468012, overlap 467991 467989 467988 468006 468004 468012 468046 CTATCTTAAAGATAG GAATCTTTTGCTTGTATTT TTAT AAATATAAACAAAAGATTC TTAAATCTTAATCTT TERM 566 468012 - 468047 + F 79 -8.6 -3.73872 | opp_overlap 467989 467988 468009 468006 468004 468012 468046, overlap 467989 468009 TCTTAAAGATAGGAA TCTTTTGCTTGTATTT TTAT AAATATAAACAAAAGA TTCTTAAATCTTAAT TERM 567 468047 - 468012 - f 75 -8.6 -3.42257 | opp_overlap 467989 468012 468009, overlap 467989 467988 468009 468006 468004 468046 TCTTAAAGATAGGAA TCTTTTGCTTGTATTT TTAT AAATATAAACAAAAGA TTCTTAAATCTTAAT C8J_0465 468083 - 469786 + | hypothetical protein TERM 568 469791 - 469819 + F 82 -9.7 -3.65581 | opp_overlap 469793, overlap 469793 469800 GCTCAAGATGATTAA AATCCAAAAGGTT AAA AGCCTTTTGGATC TTGTTAAAAATTAAT TERM 569 469817 - 469793 - f 91 -10.1 -4.35461 | opp_overlap 469793 469791 469800 TCAAGATGATTAAAA TCCAAAAGGTT AAA AGCCTTTTGGA TCTTGTTAAAAATTA TERM 570 469793 - 469817 + F 91 -12.3 -3.40498 | opp_overlap 469793, overlap 469791 469800 TCAAGATGATTAAAA TCCAAAAGGTT AAA AGCCTTTTGGA TCTTGTTAAAAATTA TERM 571 469860 - 469848 - f 73 -3.5 -5.28281 | overlap 469854 ATAAAACAAACAAAA TTTAA AGA TTAAA AATCAAAAAAGATTG TERM 572 469885 - 469871 - f 100 -7.2 -5.54079 | TTAAAAATCAAAAAA GATTGA TAA TCAATC AAACAAATACAAAAA TERM 573 470495 - 470485 - g 75 -4 -5.33785 | AACGATTACAAAAAA GAAA GTA TTTC AGTTCAAGACTTACA TERM 574 470616 - 470626 + G 74 -6.8 -4.20531 | opp_overlap 470615 470616 AATTCAAATCAATAT CACC TTA GGTG TTTTAGGTAAATATG C8J_0466 470026 - 471840 + | putative outer-membrane protein TERM 575 471868 - 471911 + T 79 -10 -2.90075 | gap 1, opp_overlap 471879 471884, overlap 471841 471837 471875 AGTTTTTCTTGCTAA G-GGTGAATTTATAGAATTTA AAA TAAATTCCATAAATTCATCAC TATCATTAGGGCAAC hemH 472773 - 471844 - | ferrochelatase C8J_0468 473636 - 472770 - | Gfo/Idh/MocA family oxidoreductase C8J_0469 474714 - 473641 - | DegT/DnrJ/EryC1/StrS aminotransferase family protein TERM 576 474598 - 474581 - G 72 -4.1 -5.1615 | TTAACACCTAAAAAA TGAGCTA AATT TTGCTCA AATTCGTTAAGCTTT TERM 577 476877 - 476895 + G 80 -9 -3.86897 | CATTGAAGCTGTGGT TTCTAAAG CGG CTTTAGAA TTTGTAAAAAATCAA alaS 474829 - 477357 + | alanyl-tRNA synthetase TERM 578 477391 - 477433 + G 100 -9.4 -4.51174 | opp_overlap 477390 477395 GTTCCATTTCAAGAG CTAACTTGCTTAAAACCG CAAAGAT TGATTTTAGGCAAGTTAG TTTTGATTATGATGA maf 477357 - 477908 + | Maf-like protein TERM 579 478256 - 478242 - g 74 -8.6 -3.23708 | opp_overlap 478241, overlap 478240 GCGGTGGAAAAACCA TGGAAG GAG CTTCCA CTCTTACCCAGCAAT pbpA 477905 - 479836 + | penicillin-binding protein 1A TERM 580 479824 - 479869 + T 81 -5.2 -5.22794 | gap 2, opp_overlap 479831 479839 479842, overlap 479826 479831 479839 ATTTAATGAAAGCGA GATTA-T-ATTTTGAAAGTAGA AAGA TCTACTTTCAAAATGATTAAGC TTTTTTGATGATTAT TERM 581 479831 - 479860 + T 100 -13.9 -2.80411 | opp_overlap 479831 479839 479842, overlap 479826 479824 479839 GAAAGCGAGATTATA TTTTGAAAGTAGA AAGA TCTACTTTCAAAA TGATTAAGCTTTTTT TERM 582 479860 - 479831 - T 100 -13.9 -2.88236 | opp_overlap 479826 479824 479831 479839, overlap 479839 479842 GAAAGCGAGATTATA TTTTGAAAGTAGA AAGA TCTACTTTCAAAA TGATTAAGCTTTTTT clpB 482437 - 479864 - | ATP-dependent chaperone protein ClpB TERM 583 482384 - 482402 + g 78 -10.4 -2.56539 | opp_overlap 482376, overlap 482383 482381 AGCTAAAGATGCTGC GCTTTCAA GGT TTGAAAGC ATATTATCAGTTAGA C8J_0474 482839 - 482549 - | hypothetical protein C8J_0475 482957 - 484291 + | carboxyl-terminal protease TERM 584 484498 - 484484 - g 78 -4.2 -5.40072 | opp_overlap 484484 TTTGCTCGAAAAAAA TGGGAT TAA AACCCA TTTGGTAGAAACTAT purC 484293 - 485003 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 585 485158 - 485142 - g 72 -5.2 -4.76478 | overlap 485136 CAAAACAAATCAAAA TTTCTC TTGAT GAGAAA GATGAAAAATTAGCC C8J_0477 485012 - 485257 + | phosphoribosylformylglycinamidine synthase, purS protein purQ 485259 - 485906 + | phosphoribosylformylglycinamidine synthase subunit I C8J_0479 485903 - 487099 + | hypothetical protein TERM 586 487699 - 487669 - g 81 -8.5 -4.09685 | GCGGAGTGCTTAAAA TCATTTGTATGGA TTTAG TCGATACAAATGA TGACAAATGGCTTGA C8J_0480 487080 - 487772 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative TERM 587 487952 - 487980 + G 81 -6.1 -5.03747 | opp_overlap 487939 AATAAAGGTTTATCT CCTTTACTTAAAA GCT TTATAAGTACAGG TTTTTTAGGAGCTTT C8J_0481 487766 - 488134 + | hypothetical protein TERM 588 488634 - 488618 - g 79 -5.2 -5.26875 | opp_overlap 488618 488627 GTTTTAAGTAAAAAA GCTTTA GATGA TAAAGC TTATCTTTGGAGTTC TERM 589 489011 - 489021 + G 70 -4 -4.91852 | opp_overlap 489011 AGTGAAGGAAAATTA GAAT ACA ATTC TTTATTTTTCATACC htpG 488207 - 490033 + | heat shock protein 90 TERM 590 490100 - 490077 - g 77 -8.2 -3.79505 | opp_overlap 490074 AAAGCAAGATTTAAA CGCATATCAA ATTT TTGATGTGCG TACTCCTTTAGAATG C8J_0483 490030 - 490347 + | hypothetical protein TERM 591 490541 - 490529 - g 72 -6.3 -4.19879 | AGAAAATGTCCAAAA TGCTA ATT TAGCA TTAAAAAATTCTGAT C8J_0484 490347 - 490781 + | hypothetical protein C8J_0485 490785 - 492554 + | Na/Pi-cotransporter, putative pbpB 494359 - 492551 - | penicillin-binding protein TERM 592 492882 - 492909 + g 88 -3.4 -6.12458 | overlap 492883 ATAAGAACATTTTGC ATCGTTTTAGCG GCTT CGCTAGAAAGAA TTTTTTCTTTTTTTA TERM 593 492883 - 492908 + g 74 -6.9 -4.21984 | overlap 492882 TAAGAACATTTTGCA TCGTTTTAGCG GCTT CGCTAGAAAGA ATTTTTTCTTTTTTT TERM 594 493891 - 493907 + g 86 -9.5 -3.88583 | overlap 493894 TTAATCCTCTTGTTT CAACTCT TCC AGAGTTG TTTGTAAAAGCTTTG fliE 494662 - 494366 - | flagellar hook-basal body protein FliE flgC 495163 - 494669 - | flagellar basal body rod protein FlgC flgB 495604 - 495173 - | flagellar basal body rod protein FlgB C8J_0490 496685 - 495684 - | hypothetical protein TERM 595 495823 - 495803 - GH 86 -6.9 -4.98531 | TCTTTAAAGGAAAAA TAGCTGC ACGAATA GCAGCTA AAGAAACATTACAAA TERM 596 496225 - 496208 - GH 85 -5.6 -5.40072 | TTTCTGGTAAAAAAA CTCCTT CATCAT AAGGAG CTTGAGCTTGAAATT TERM 597 497047 - 497035 - gH 77 -4.9 -5.21709 | opp_overlap 497035 GCTGATATTAAAAAA CTTTT ATT AAAAG ATTATGATTTAAATA TERM 598 497812 - 497794 - gH 77 -7.6 -4.13304 | opp_overlap 497782, overlap 497782 AAAGCATTTGTAAAA TTAAATCA AAA TGATTTAA ATATAGAAAATGCTA C8J_0491 496600 - 499170 + | hypothetical protein TERM 599 499213 - 499174 - fH 77 -6 -4.88407 | opp_overlap 499167 499175 499176 499182, overlap 499167 499176 TTACTTAATTAAAAA TATTTAAAGTTTGTTTGA AAAC TAAAACAAACTTTAAACT TACTCTTGCATTTTT TERM 600 499211 - 499176 - fH 93 -10.8 -4.06004 | opp_overlap 499167 499175 499176 499182, overlap 499167 499174 ACTTAATTAAAAATA TTTAAAGTTTGTTTGA AAAC TAAAACAAACTTTAAA CTTACTCTTGCATTT TERM 601 499176 - 499211 + FH 82 -10.8 -2.63637 | opp_overlap 499167 499176 499174, overlap 499167 499175 499182 ACTTAATTAAAAATA TTTAAAGTTTGTTTGA AAAC TAAAACAAACTTTAAA CTTACTCTTGCATTT icd 499287 - 501491 + | isocitrate dehydrogenase, NADP-dependent TERM 602 501785 - 501771 - g 73 -8.6 -3.05844 | TGCTTCAGTTGAATA CAAGCA TTA TGCTTG ATTGCGCTAAAAAAA mdh 501488 - 502390 + | malate dehydrogenase sucC 502391 - 503554 + | succinyl-CoA synthase, beta subunit sucD 503564 - 504433 + | succinyl-CoA synthase, alpha subunit TERM 603 504435 - 504423 - f 70 -3.5 -5.25805 | AAGAAATTCAAAAAA TATTA GGT TAATA AAGGAAAAAACATGA TERM 604 504530 - 504540 + G 81 -8.2 -4.24204 | TTGTGTTAGCTATTG CCCC GCT GGGG TTTTAGCTATGCGTG oorD 504447 - 504758 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorD TERM 605 505802 - 505812 + G 80 -6.8 -4.72029 | opp_overlap 505801 ATTGAAAGAGTAACT TCGC GTC GCGA TTTTATTAGCTTGCA oorA 504767 - 505891 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorA oorB 505892 - 506737 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorB oorC 506734 - 507291 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorC TERM 606 507291 - 507317 + F 83 -11 -2.64938 | opp_overlap 507292 507296, overlap 507296 AAAACCACATTCATA ATAAATTCCGCA CCA TGCGGAATTTAA CTTCTAAAATTTTAC TERM 607 507316 - 507292 - f 100 -14.5 -3.41414 | opp_overlap 507291 507296, overlap 507296 AAACCACATTCATAA TAAATTCCGCA CCA TGCGGAATTTA ACTTCTAAAATTTTA TERM 608 507296 - 507312 + F 89 -10.9 -3.80893 | opp_overlap 507292 507296, overlap 507291 CACATTCATAATAAA TTCCGCA CCA TGCGGAA TTTAACTTCTAAAAT TERM 609 507312 - 507296 - f 93 -10.9 -4.34488 | opp_overlap 507296 507291, overlap 507292 CACATTCATAATAAA TTCCGCA CCA TGCGGAA TTTAACTTCTAAAAT C8J_0500 507430 - 507693 + | hypothetical protein C8J_0501 507696 - 508232 + | hypothetical protein TERM 610 508879 - 508895 + G 71 -6.6 -3.99432 | opp_overlap 508878 508879 AATGATTTTAAAGAG GGTAAG ACTAC CTTACC TTATATTTATCTTTA TERM 611 509030 - 509017 - g 79 -5.3 -5.29445 | opp_overlap 509017 509015 TTTGAAGAACAAAAA GCTTT AGAA AAAGC TATTTTAGAAGCTAA C8J_0502 508246 - 509139 + | polyprenyl synthetase family protein TERM 612 509409 - 509430 + G 70 -3.7 -5.08824 | overlap 509414 GCTGATATTTTTGAA GATAGTGGA GCAA TCCATCATC TTTTTTCCGTAGCAA hemA 509139 - 510437 + | glutamyl-tRNA reductase proS 510424 - 512130 + | prolyl-tRNA synthetase TERM 613 512224 - 512241 + G 81 -7.1 -4.652 | GTAATTTTTTATTTT TCATACT TTTG AGTATGA TTTTTGGGGTGATTT C8J_0505 512127 - 512516 + | hypothetical protein hemC 512513 - 513436 + | porphobilinogen deaminase TERM 614 514344 - 514334 - g 72 -2.6 -5.42265 | TGAAAGTAGAAAAAA TTTA TGC TAAA AAAGATGCGATCTAT C8J_0507 513433 - 515235 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative flaG 515392 - 515757 + | flagellar protein FlaG TERM 615 515918 - 515904 - g 72 -2.9 -5.39681 | ACAACCAAACAAAAA GATTT AACAG AAATC AAAACTAAATTACTA fliD 515760 - 517691 + | flagellar capping protein fliS 517703 - 518089 + | flagellar protein FliS C8J_0511 518070 - 518345 + | hypothetical protein efp 518777 - 519346 + | elongation factor P C8J_0513 519505 - 520197 + | hypothetical protein TERM 616 520716 - 520730 + G 78 -4.2 -5.38054 | TACCGCAAATTTTGG CTACAC TTG GAGTAG TTTTTGTTTCTACGG C8J_0514 520184 - 521137 + | hypothetical protein TERM 617 521777 - 521796 + G 71 -7.2 -3.73042 | GCTTTAGAGCCTTGT GGAGATGA GTTT TTATCTCC TGTTTTGATGGAAGC C8J_0515 521147 - 522151 + | hypothetical protein TERM 618 523360 - 523371 + G 74 -2.2 -5.64304 | CAAGTAGTGGATTAA GCGA GGCA TTGC TTTTTTCTTGTATTG C8J_0516 522276 - 523562 + | putative integral membrane protein TERM 619 523874 - 523891 + G 70 -8.5 -3.07487 | opp_overlap 523874, overlap 523873 TTAGATTAAATTTAA TTGGCAA AGAA TTGCCAA ATTTTAAAACTATGG TERM 620 523891 - 523874 - g 72 -8.5 -3.32159 | opp_overlap 523874 523873 TTAGATTAAATTTAA TTGGCAA AGAA TTGCCAA ATTTTAAAACTATGG C8J_0517 523573 - 524370 + | hypothetical protein C8J_0518 525437 - 524367 - | hypothetical protein proA 526681 - 525449 - | gamma-glutamyl phosphate reductase C8J_0520 526752 - 527687 + | pyridine nucleotide-disulphide oxidoreductase family protein TERM 621 527684 - 527713 + F 95 -9.5 -4.6038 | opp_overlap 527690, overlap 527690 527703 AATTCTTTCTGTGCT TTAAAATTTAGCC TTTG GGCTAAATTTTTA TTTTAGTTTAATCTA TERM 622 527690 - 527707 + F 100 -8.5 -5.56372 | opp_overlap 527690, overlap 527684 527703 TTCTGTGCTTTAAAA TTTAGCC TTTG GGCTAAA TTTTTATTTTAGTTT TERM 623 527707 - 527690 - f 83 -8.5 -4.07568 | opp_overlap 527690 527684 527703 TTCTGTGCTTTAAAA TTTAGCC TTTG GGCTAAA TTTTTATTTTAGTTT TERM 624 527933 - 527949 + G 70 -3.7 -5.09221 | TGCCGTGCCAAATGT TATAAGC ATG GCTTTTA TTTCTTTTTATTATA TERM 625 528489 - 528499 + G 70 -5.4 -4.56978 | TTAGGTGGTATTTTT GGAA TTT TTCC TTTCTTGTTTCAAAA C8J_0521 527868 - 529196 + | putative integral membrane protein TERM 626 529206 - 529182 - T 72 -7.3 -3.65722 | opp_overlap 529182 AAAAGAATTTTTAAA GATCTATCT TTATAGG AGATAGATC TTTTTTAAATTTTAT TERM 627 529182 - 529206 + T 100 -8.7 -5.28315 | opp_overlap 529182 AAAAGAATTTTTAAA GATCTATCTTT ATA GGAGATAGATC TTTTTTAAATTTTAT C8J_0522 530173 - 529244 - | hypothetical protein TERM 628 530825 - 530811 - g 76 -2.9 -5.54079 | opp_overlap 530811 TTAAAAAGCAAAAAA CTTTA GAAAA TAAAG GTATTATAGGGCTTG dnaB 530327 - 531703 + | replicative DNA helicase C8J_0524 531805 - 532365 + | hypothetical protein C8J_0525 532356 - 532562 + | putative integral membrane protein C8J_0526 532638 - 534320 + | hypothetical protein TERM 629 534311 - 534297 - f 73 -3.6 -5.43487 | AAATTATACAAAAAA CTTAAT CAA ACTAAG GAGAACTGATGCTAG C8J_0527 534320 - 535102 + | hypothetical protein C8J_0528 535106 - 535315 + | hypothetical protein C8J_0529 535218 - 535556 + | hypothetical protein TERM 630 535601 - 535629 + G 74 -8.3 -3.55071 | opp_overlap 535601 TCTTAGCCTTGCAAA TGCGTTTAAAGGA TTT TTATTTAAACGCA TTTCAAGCCCTATGC C8J_0530 535563 - 535868 + | hypothetical protein C8J_0531 535877 - 536560 + | hypothetical protein TERM 631 536649 - 536665 + G 71 -2.3 -5.40072 | opp_overlap 536649, overlap 536645 AATGTCCAAGGTAAA TCTTTTA TAC TTAAAGA TTTTTTTACCCAAAA C8J_0532 536601 - 536930 + | hypothetical protein TERM 632 537318 - 537335 + G 74 -2.1 -5.60993 | gap 1 TTAGTGTAGCTATAC TCAA-ACA CAA TGTATTGA TTTTTTTCTACAAGG C8J_0533 536927 - 537799 + | putative transcriptional regulator TERM 633 537846 - 537858 + F 75 -9.1 -3.28712 | GGGGAGATTTGAACT CCCGA CCT TCGGG TTATGAGCCCGACGA TERM 634 538995 - 538985 - g 72 -4 -5.10767 | CACTCAATACAAAAA CTAT GGT ATAG GAGCACAGATTTTAA ribB 538098 - 539117 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein C8J_0535 539129 - 539572 + | GatB/YqeY family protein TERM 635 540182 - 540165 - g 71 -7.1 -3.76839 | TAAGGGTAACTCAAA GCAAATT AAAA AATTTGC AGAGCTTTTAAAAGA ilvB 539590 - 541290 + | acetolactate synthase 3 catalytic subunit ilvH 541287 - 541751 + | acetolactate synthase 3 regulatory subunit TERM 636 541957 - 541936 - g 78 -6.7 -4.52347 | TAAAGAATATGAAAA TTTAGTACC TAAA GATACTAAA GCTTTGATTACTCAA lpxD 541748 - 542713 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 637 542720 - 542761 + T 70 -8.2 -3.21938 | overlap 542721 542751 CAAGATTAACATCGC ATCGCCATAAGAGTAAAA GCGATA TTTTTCTTTTATGGCGAG TTCATAAAGTTTTAA TERM 638 542721 - 542760 + T 87 -11.7 -2.52681 | overlap 542720 542751 AAGATTAACATCGCA TCGCCATAAGAGTAAAA GCGATA TTTTTCTTTTATGGCGA GTTCATAAAGTTTTA queA 543730 - 542702 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase tatC 544460 - 543723 - | Sec-independent protein translocase TatC TERM 639 543883 - 543869 - G 85 -3.6 -5.75538 | CTGAAAAAACAAAAA TAACTA AAA TAGCTA TGCGAAAATGGCGTT C8J_0541 544868 - 544461 - | sec-independent translocase TERM 640 544568 - 544588 + g 73 -5.5 -4.54449 | TATCATCTCTGCTAT CAAAGGT TAAATCT ACCTTTG TTTTATCTAAAATAT C8J_0542 545994 - 544927 - | coproporphyrinogen III oxidase TERM 641 545370 - 545391 + g 72 -4.5 -5.00616 | ATTTCATTAAATTAG GAGCATTTT TTTT GAAATGTTC TTTTTTGGCAAAGGC TERM 642 546512 - 546485 - g 100 -11.6 -4.42806 | opp_overlap 546483 TGAGTGTTAAACAAA TTTTTGAAATGA TTAA TCATTTCAAAAA AAATATTTATGTTAA C8J_0543 546094 - 546564 + | dinucleoside polyphosphate hydrolase TERM 643 547160 - 547146 - g 71 -5.8 -4.45577 | opp_overlap 547132 547146, overlap 547132 AGAAATTGGATAAAA TTTCTT ATG AAGAAA TGCTTGAACTTGCAA TERM 644 547236 - 547226 - g 72 -2.6 -5.41143 | opp_overlap 547226 GAGCTTGCAAAAAAA TTAA ATG TTAA CTTAGTAACTAGAAG C8J_0544 546566 - 547768 + | aspartate kinase C8J_0545 547769 - 548305 + | hypothetical protein C8J_0546 548311 - 548910 + | DNA polymerase III subunit delta' TERM 645 549226 - 549243 + G 77 -5.7 -5.00616 | ACTTAAAAATTTGGC TCTTTTT TTGC AAAAAGA TTTTTTAAAACCGAA folP 548912 - 550054 + | dihydropteroate synthase TERM 646 551302 - 551331 + G 72 -4.5 -4.99043 | gap 1, opp_overlap 551308, overlap 551306 551330 TCAAAATATAGATTG TGAA-GATAGACTT GTA AATTCTATCATTCA TTTTGTTTCTAAAAA ligA 550055 - 551998 + | NAD-dependent DNA ligase LigA TERM 647 552873 - 552855 - g 100 -9 -5.63236 | opp_overlap 552857, overlap 552870 ATTCAAAAAGAAAAA GATCTTTT TGA AAAAGATC TTAAAGATCTTAGAG TERM 648 552882 - 552870 - g 76 -6.3 -4.57073 | opp_overlap 552857, overlap 552855 GATCTTTTTGAAAAA GATCT TAA AGATC TTAGAGAAATTTTTA C8J_0549 551979 - 552983 + | hypothetical protein tlyA 552980 - 553741 + | hemolysin A TERM 649 553932 - 553948 + GF 70 -3.8 -5.16472 | opp_overlap 553927 553925 553932 TTTGAAAGTATAAAA TCTTTA GATGG TAAAGA TTTTTTAAGCTTTTT ribF 553710 - 554561 + | bifunctional riboflavin kinase/FMN adenylyltransferase C8J_0552 554551 - 555258 + | hypothetical protein C8J_0553 555463 - 555248 - | putative lipoprotein C8J_0554 555900 - 555460 - | hypothetical protein TERM 650 555663 - 555675 + g 90 -6.3 -5.62219 | opp_overlap 555663 TTAAAGCTTCTAATA TCTGA TTA TCAGA TTTTTTTGGTGTGTT C8J_0555 556591 - 555959 - | hypothetical protein C8J_0556 557252 - 556602 - | putative periplasmic protein TERM 651 556793 - 556813 + g 76 -7 -4.36903 | opp_overlap 556797 AAACTTCGATACTTT GAAATTTG AAAGC CAAATTTC TTTCTCTTTGCTCGA nth 557875 - 557249 - | endonuclease III TERM 652 558515 - 558498 - g 72 -4.1 -5.03314 | opp_overlap 558498 TCCAGGTTCAAAAAA CCAAGGT GGTG AGCTTGG TTGGTTTGATCAATC peb4 557956 - 558777 + | major antigenic peptide PEB4 fba 558777 - 559841 + | fructose-bisphosphate aldolase TERM 653 559833 - 559863 + F 86 -7 -5.08255 | opp_overlap 559838, overlap 559838 TTAAACTGTATAAAC AAAAACTAAGCATT TTA AAGGCTTAGTTTTA TTTTGTTTTAAAAAT TERM 654 559838 - 559858 + F 95 -6.9 -5.40279 | opp_overlap 559838, overlap 559833 CTGTATAAACAAAAA CTAAGCATT TTA AAGGCTTAG TTTTATTTTGTTTTA TERM 655 559858 - 559838 - f 95 -6.9 -5.38054 | opp_overlap 559838 559833 CTGTATAAACAAAAA CTAAGCATT TTA AAGGCTTAG TTTTATTTTGTTTTA TERM 656 560458 - 560468 + G 71 -3.2 -5.20783 | GATTTGTTAAGCGGA GTAG GAA CTGC TTTTTATGTTTCAAT C8J_0560 559936 - 561378 + | hypothetical protein C8J_0561 561375 - 562328 + | chemotaxis protein MotB, putative TERM 657 562508 - 562490 - g 73 -8.9 -3.19389 | overlap 562497 TAAGTTATGGAGGAA GCCAAAG TAATG CTTTGGC GGCATTAAGTATTTT TERM 658 563132 - 563153 + G 81 -10.3 -3.07013 | opp_overlap 563131 563132 TTTATATACATCAAG GTGGAATTT TAGG AAATTCCAC TATGTTAGAGAGATA TERM 659 563153 - 563132 - g 78 -10.3 -2.60797 | opp_overlap 563132, overlap 563131 TTTATATACATCAAG GTGGAATTT TAGG AAATTCCAC TATGTTAGAGAGATA C8J_0562 562315 - 563190 + | hypothetical protein C8J_0563 564525 - 563182 - | putative neurotransmitter:Na+ symporter protein TERM 660 563222 - 563208 - G 79 -5.8 -5.03994 | TTCCATAGATAAAAA TGATTA AAA TAATCA AAGGTACTATATATT TERM 661 564600 - 564577 - R 75 -9.8 -2.6369 | opp_overlap 564579 564582 564595, overlap 564576 564575 564579 564582 ATAACTTTAAAAACT TATAAGCTAT CCAT ATAGCTTATA TCGTAAGTATTTTTT C8J_0564 565244 - 564576 - | MOSC domain-containing protein dsbD 566944 - 565241 - | thiol:disulfide interchange protein DsbD TERM 662 566334 - 566313 - G 83 -3.1 -5.82281 | opp_overlap 566319 AAAGAGAGAAAAAAA CTATATTTT TTTG AAAATTTAG CATTACTTTTTGCTA TERM 663 566671 - 566695 + g 72 -5.1 -4.77036 | opp_overlap 566672 566676, overlap 566672 CAAAGTGCTCTAGTA ATAAATTTGGC AAA GCTAAATTTAA TTTTTGATAATAAAC TERM 664 566672 - 566694 + g 76 -8.6 -3.4574 | opp_overlap 566672 566676, overlap 566671 AAAGTGCTCTAGTAA TAAATTTGGC AAA GCTAAATTTA ATTTTTGATAATAAA TERM 665 567577 - 567564 - g 91 -5.3 -5.88471 | overlap 567576 GATGAGCAAAAAAAA CGTTT TGAA AAACG CCGAAGCGATCCGCT C8J_0566 567039 - 567920 + | hypothetical protein C8J_0567 567929 - 569119 + | carboxypeptidase C8J_0568 569198 - 570370 + | macrolide-specific efflux protein macA TERM 666 571596 - 571575 - g 80 -2.3 -5.81032 | overlap 571576 TAATGCTAAAAAAAA TCTTTTTCC TGAT GAAAAAAGT GAAAATATTTTAGGT C8J_0569 570370 - 572295 + | macrolide ABC transporter ATPase/inner membrane protein TERM 667 573429 - 573447 + G 73 -9 -3.09492 | opp_overlap 573424 AAAGTAACACCTTGC TTTTGCAA AAT TTGCAAAA TATTAACATTAAACA C8J_0570 572297 - 573667 + | outer membrane efflux protein C8J_0571 574848 - 573670 - | hypothetical protein TERM 668 574306 - 574332 + g 71 -8.8 -2.76483 | overlap 574319 574323 TAACTCATAGCTTTG GTTTTTTGCATC TTT GATGCTAAAAGC ATTGGTATTTTGTTT TERM 669 574686 - 574698 + g 76 -2.7 -5.53991 | CTAATTTTTTTTCTA GATTT TTA AGATC TTTTTTTAATACATA C8J_0572 575845 - 574835 - | hypothetical protein TERM 670 575696 - 575710 + g 91 -10 -4.10429 | overlap 575709 TTCTAATTTAATTTT GAAGCC ATT GGCTTC TTTTAAAAGATCATT C8J_0573 577222 - 575846 - | alginate O-acetyltransferase AlgI TERM 671 576409 - 576425 + g 70 -3.7 -5.02074 | TGATATGCCATCTAG CCCAAAA ATC TTTTAGG TTTTTTGCAAGATAA cft 577768 - 577265 - | nonheme iron-containing ferritin TERM 672 578110 - 578095 - g 72 -2.6 -5.36364 | gap 1 TTAAAAATACAAAAA CTC-CTA TAG TAGAGAG CTTGGGAACAGGGGG TERM 673 578352 - 578338 - g 72 -5 -4.73614 | CATTAGCAAAAGAAA TTCCAC AAA ATGGAA AACTTATACCAAATC TERM 674 578777 - 578759 - g 75 -4.6 -5.10208 | overlap 578761 CAATGCTAAGAAAAA TCCAAAAG AAG CCTTTGAA TTTGCAAAAATTTAT pstS 577947 - 578942 + | phosphate transport system substrate-binding protein TERM 675 578998 - 579036 + G 100 -17.8 -4.41895 | overlap 579029 TTTTTTTATGTGCTT TTGTAAGCGTGATAGTAA GCT TTGCTATCATGCTTACAA TTTTAATTGAAGCTT TERM 676 579108 - 579118 + G 76 -6.8 -4.42386 | TCAAGTCAGTGGGCA GCTG ATG CAGC TTTTATGAATGCAGA pstC 578952 - 579866 + | phosphate transport system permease protein TERM 677 579885 - 579872 - g 73 -3.9 -5.19261 | AAATTTATGAAAAAA CTTTT TAAA AAAAG ACAAAAAGCTTCAAA TERM 678 579922 - 579893 - g 72 -2.9 -5.44837 | opp_overlap 579901, overlap 579894 579895 AAAAAAAGACAAAAA GCTTCAAAGTCTT TTAA AAGACTTTGTAAA ATGGGGCTTTATATT TERM 679 580261 - 580276 + G 71 -7.6 -3.41114 | opp_overlap 580247 580260 580259, overlap 580260 TGGGGACTCAAAATC TCCTGA AAAT TCAGGA ATTTTATCTTCAGTT C8J_0577 579863 - 580951 + | phosphate ABC transporter, permease protein PstA, putative TERM 680 581063 - 581075 + G 77 -4.8 -5.23016 | overlap 581058 TCGGTGCTTCTGGAT GTGG TAAAT CCAC TTTTTTGCGTTGTTT TERM 681 581214 - 581242 + G 70 -8.4 -3.17146 | opp_overlap 581214, overlap 581212 TTTTCAACAACCTAA TGTTTTCGTAAA AAGCA TTTATGAAAACA TCTCTTATGCACCAA TERM 682 581407 - 581440 + G 70 -6.2 -4.18018 | gap 1, opp_overlap 581413 CAACGCCTTTGTATT GCAAGAGCTTTAG CAATAAAAC CTAA-GCTCTTGC TTTTAGATGAGCCAA pstB 580948 - 581688 + | phosphate ABC transporter, ATP-binding protein TERM 683 581689 - 581714 + F 100 -13.5 -4.0896 | opp_overlap 581672 581689 581694, overlap 581694 GGTGCTTTTGGATAA TAAAACCGCTA TTTT TAGCGGTTTTA TTTTAAGAAAAATTT TERM 684 581714 - 581689 - f 100 -13.5 -3.28712 | opp_overlap 581689 581694, overlap 581672 581694 GGTGCTTTTGGATAA TAAAACCGCTA TTTT TAGCGGTTTTA TTTTAAGAAAAATTT TERM 685 581709 - 581694 - f 93 -9 -4.77165 | opp_overlap 581689 581694, overlap 581672 581689 TTTTGGATAATAAAA CCGCTA TTTT TAGCGG TTTTATTTTAAGAAA TERM 686 581694 - 581709 + F 100 -9 -5.07652 | opp_overlap 581672 581694 581689, overlap 581689 TTTTGGATAATAAAA CCGCTA TTTT TAGCGG TTTTATTTTAAGAAA C8J_0579 581766 - 583082 + | MATE efflux family protein TERM 687 583360 - 583347 - g 76 -2.5 -5.51165 | AAAATGCCAAAAAAA TTTAT TTTG ATAAA GATAAAATAATTTGT C8J_0580 583058 - 583705 + | hypothetical protein TERM 688 584864 - 584850 - g 70 -5.8 -4.34402 | opp_overlap 584849 TCTTTTAGATGAAAA TTTTGA GCT TCAAAA CAATTTTTATTCTTT C8J_0581 583747 - 585267 + | hypothetical protein TERM 689 585326 - 585341 + G 83 -7.6 -4.57569 | opp_overlap 585326 585336 TTAGTTTATGAACTA GCTTTG AAAT CAAAGC TTTTTGGAGAGGTAA TERM 690 585609 - 585587 - g 72 -4.3 -5.07053 | AAGGAGTGTAAAAAA GAATTTTTT GATGA AAAAAATCC ACGCTTTTTATATCC TERM 691 586273 - 586296 + G 75 -4 -5.33026 | TGAGTTTAATTTGTG TAAAAAACTT GATA AAGTTTTTGA TTTTTATTTGGATTA hypF 585248 - 587437 + | [NiFe] hydrogenase maturation protein HypF hypB 587515 - 588258 + | hydrogenase accessory protein HypB hypC 588258 - 588539 + | hydrogenase assembly chaperone HypC/HupF TERM 692 588701 - 588712 + G 70 -5.8 -4.27117 | overlap 588698 ACTTTATCCATGGGC CAGG ATGT CCTG TTTGTGTTATGCCAA hypD 588523 - 589614 + | hydrogenase expression/formation protein HypD TERM 693 590335 - 590320 - g 74 -3.3 -5.4505 | overlap 590294 TCTTTGAAGAAAAAA TCATC GTTCAA GATGA GGTTTTAGGACTTTG hypE 589611 - 590585 + | hydrogenase expression/formation protein HypE TERM 694 590914 - 590883 - g 82 -7.4 -4.76963 | opp_overlap 590883 GTATAGAATATAAAA TCACACAAGGTG AGGACTTA CACCTTATGCGA CTTGTGATGGAGTGA hypA 590585 - 590929 + | hydrogenase nickel insertion protein HypA TERM 695 590928 - 590958 + T 95 -12.9 -2.93357 | opp_overlap 590932, overlap 590932 GACTTGTGATGGAGT GAAAGTAAAATCA ATAAA TGATTTTACTTTC TGCTTTCAAATGCTT TERM 696 590954 - 590932 - T 76 -7.9 -3.6682 | opp_overlap 590932 590928 TGTGATGGAGTGAAA GTAAAATCA ATAAA TGATTTTAC TTTCTGCTTTCAAAT TERM 697 590932 - 590954 + T 80 -7.9 -4.14056 | opp_overlap 590932, overlap 590928 TGTGATGGAGTGAAA GTAAAATCA ATAAA TGATTTTAC TTTCTGCTTTCAAAT C8J_0588 591994 - 590951 - | hypothetical protein TERM 698 591333 - 591343 + g 75 -4 -5.2422 | overlap 591334 591336 AAATCATTAATAATT TCTT TAA AAGA TTTTTTAATGTAATT C8J_0589 593052 - 592087 - | DNA polymerase III subunit delta TERM 699 592144 - 592173 + g 100 -13.1 -3.36823 | CAAAAATTCTTTTTT TACGAGCTTAGAA TTGG TTTTAAGCTCGTA TTCGCTTTTAAGCAA TERM 700 592889 - 592874 - G 88 -7.6 -5.00616 | opp_overlap 592873 CCTGCGCTTAAAAAA TCACTC GCAC GAGTGA AGTTGTATTCTTCAA C8J_0590 594979 - 593045 - | RNB-like protein ilvC 595098 - 596120 + | ketol-acid reductoisomerase TERM 701 596201 - 596235 + G 71 -8.8 -2.88802 | overlap 596200 596197 TTGTATAGCTTTAGC TTTGGGAATTTTAGTA AAA TATCAAAATTCCCAAG ATGTTTCTTCTGTTA C8J_0592 596124 - 597206 + | hypothetical protein dprA 597196 - 597969 + | DNA processing protein A C8J_0594 597966 - 598349 + | Holliday junction resolvase-like protein TERM 702 598496 - 598486 - g 72 -2.6 -5.45802 | TTTTTAAAACAAAAA TTAA AAT TTAA AAAGATCAATGCTTA C8J_0595 598339 - 599217 + | NOL1/NOP2/sun family protein TERM 703 599355 - 599334 - T 90 -7.3 -5.08255 | ACTTTGAAAAGAAAA TCACAGCGT GAAA AGGCTGTGA ATAAAGTTGAATTTT mrsA 599890 - 599393 - | methionine sulfoxide reductase A TERM 704 599561 - 599587 + g 71 -6.8 -3.98107 | TTTTTGCTGTTCTTC GATGAAATTTTG AGC TAAAATTTTATC TTCTTCATTTTCGTA TERM 705 599904 - 599933 + r 72 -6.5 -4.27774 | overlap 599908 ATTGCGAGTTTTCCT TGAGTTTAGCCCT TTGA AGGGCTAAGATTA TTTGTAGTTTTTGAT TERM 706 599908 - 599929 + r 77 -9.5 -3.10925 | overlap 599904 CGAGTTTTCCTTGAG TTTAGCCCT TTGA AGGGCTAAG ATTATTTGTAGTTTT ppa 600449 - 599931 - | inorganic pyrophosphatase TERM 707 600035 - 600045 + g 75 -4 -5.19819 | opp_overlap 600035, overlap 600037 CTAAAATTTTATAAG TTTC AAA GAAA TTTTTGATTTTATTT adk 601037 - 600459 - | adenylate kinase aspS 602785 - 601034 - | aspartyl-tRNA synthetase TERM 708 601925 - 601907 - G 79 -7.6 -4.3078 | AATCACATCAATAAA TTTAAGAT CAA ATCTTAAA TCCGGCTTATCAGAG TERM 709 603203 - 603222 + G 78 -4.4 -5.40072 | gap 1, opp_overlap 603203 603204 TTTAAAGTTGATGAA GC-TGAAAA TTT TTTTCAAGC TTTTTTTCAAGGAGA C8J_0600 602876 - 603736 + | ATP-NAD kinase, putative TERM 710 604159 - 604184 + G 79 -7.1 -4.37527 | overlap 604175 AATACAAATTTTGTT TCTTTTTTAGA AGAT TTTAAAAAAGA TTTTAATGCTTATAG TERM 711 604687 - 604669 - g 80 -6.1 -4.96028 | overlap 604681 TTTGAAAAAAAAGAA CTTGAAA AAAAA TTTCAAG AATTAAAACAAAAAT TERM 712 604695 - 604681 - g 80 -2.2 -5.81032 | overlap 604669 GAACTTGAAAAAAAA TTTCAA GAA TTAAAA CAAAAATTAGAAGAA TERM 713 604839 - 604827 - g 72 -4.9 -4.87803 | opp_overlap 604827, overlap 604822 GACGCTTAAAGAAAA TGAAA AAA TTTCA ATTTCAGGCAAAGAT TERM 714 605031 - 605016 - g 72 -7.6 -3.69618 | TTTAAGCGGAAAAGA GGCTAT GAGT ATAGCC AAGGTTTTAGAGGAG recN 603736 - 605259 + | DNA repair protein RecN C8J_0602 605363 - 606607 + | response regulator/GGDEF domain-containing protein C8J_0603 606598 - 607413 + | TatD family hydrolase TERM 715 607653 - 607677 + GF 81 -7.1 -4.61868 | opp_overlap 607650 ATAAGAAAAATTTTA TCCCAGCAGGA AGT TCCTGATGAGA TTTTGTATCTAGCTA TERM 716 608400 - 608390 - gf 72 -2.6 -5.36314 | TAAAATAGCAAAAAA TTAT AAT ATAA GTGTTGATGAAATTC C8J_0604 607413 - 608531 + | putative secreted transglycosylase C8J_0605 608491 - 609318 + | rare lipoprotein A TERM 717 609790 - 609776 - g 81 -2.8 -5.67063 | TTTAGTAGAAAAAAA TCATCT AGA AGAAGA ATGGAATAAGCTTTG C8J_0606 609324 - 609812 + | YrbI family phosphatase C8J_0607 609803 - 610318 + | hypothetical protein C8J_0608 610300 - 610761 + | OstA family protein C8J_0609 610758 - 611354 + | GTPase EngB C8J_0610 611351 - 611845 + | hypothetical protein TERM 718 613213 - 613227 + G 70 -4.2 -5.00884 | overlap 613214 AATCGCAAAAGGTGG AGAGGT TAT ACCTCA TTTTTTAAAAAGCAT TERM 719 613214 - 613226 + G 72 -7.7 -3.60048 | overlap 613213 ATCGCAAAAGGTGGA GAGGT TAT ACCTC ATTTTTTAAAAAGCA pbpC 611846 - 613654 + | penicillin-binding protein 2 TERM 720 613673 - 613688 + T 74 -4.8 -5.055 | opp_overlap 613669 613673 TTAGTTGTAAATTGA GTTTTT CAAA AAAAAC TTTTTTAGCAATTGG TERM 721 613746 - 613712 - T 95 -10.3 -4.58283 | opp_overlap 613702 613714 CAATTGGTTTAAAAA CCTTGTATTAAAC AAATTATAA GTTTAATACAAGG AAAATTTATCTATGT C8J_0612 615565 - 613775 - | M24 family peptidase TERM 722 614428 - 614407 - G 73 -5.9 -4.58644 | AATCAATAAGTAAAA GCCCATCTT TTTT AAGATAAGC AAAACTCTCTTTTGT C8J_0613 617134 - 615581 - | di-/tripeptide transporter TERM 723 616808 - 616789 - G 76 -5.2 -5.16841 | overlap 616777 CCATACCAACAAAAA TTATTTTA TTGT TAAAATAA GAAAAGGCTATGCAC C8J_0614 618834 - 617305 - | hypothetical protein TERM 724 617402 - 617391 - G 75 -4.4 -5.18726 | opp_overlap 617391 GCGCTACAACAAAAA GCAT CCAC ATGC ATTGTCCAAAAATAT TERM 725 617964 - 617946 - G 75 -4.7 -5.05116 | opp_overlap 617946 617946 CTACAAAGAATAAAA CAATTAA AATTG TTAATTG CTGTTTTTCTCTTTT TERM 726 618345 - 618329 - G 71 -8 -3.4033 | opp_overlap 618328 AAACCACATATAAGA GGAGCA ATGAA TGCTCC AATGTTAATTCCTAT TERM 727 618944 - 618906 - R 93 -12.3 -3.65638 | opp_overlap 618903 618901 618896, overlap 618900 ATAATTAAATTACAA TATTTTTAAATATTTTT TTTAT AAAAATATTTAAAAATA TAACATTTTAATATT C8J_0615 619509 - 618961 - | hypothetical protein C8J_0616 620605 - 619502 - | hypothetical protein TERM 728 620232 - 620244 + g 72 -2.7 -5.47399 | overlap 620241 TCCATATTACTTGGG TTGAA ATT TTCGA TTTTTTTAAGATTGA era 621470 - 620595 - | GTP-binding protein Era TERM 729 621158 - 621179 + g 71 -5.9 -4.50976 | GTACTTGTGGGTTTA GACTAAGAA AATT TTCATAGTC TTTTGTACTATCAAA hslU 622786 - 621467 - | ATP-dependent protease ATP-binding subunit hslV 623325 - 622783 - | ATP-dependent protease peptidase subunit rplI 623768 - 623325 - | 50S ribosomal protein L9 argG 625001 - 623781 - | argininosuccinate synthase C8J_0622 625129 - 625401 + | S4 domain-containing protein TERM 730 625519 - 625501 - g 85 -8.2 -4.62069 | opp_overlap 625504 TGGCTAGCGGAAAAA CAAGCTTA GTA CAAGCTTG GGTTAAATTTCTTGG C8J_0623 625398 - 625805 + | hypothetical protein C8J_0624 625798 - 626526 + | ABC transporter, ATP-binding protein rpoN 626526 - 627776 + | RNA polymerase factor sigma-54 TERM 731 628743 - 628765 + G 72 -8.4 -3.30124 | AGGTGTATTTGATTT CTTGCGTCCA AAC TGGGGGCAAG TTGTAAAAAATGGCA dcuB 627940 - 629364 + | anaerobic C4-dicarboxylate transporter TERM 732 629394 - 629369 - f 73 -9.1 -2.77895 | opp_overlap 629370, overlap 629368 GTTATCTTTAACAAT TTTTAGCAGGA TTTT TCCTGCTAAAT TTTTCATTTGTCTTT TERM 733 629370 - 629393 + F 100 -12.6 -5.08367 | opp_overlap 629369 629368 TTATCTTTAACAATT TTTAGCAGGA TTTT TCCTGCTAAA TTTTTCATTTGTCTT C8J_0627 629524 - 629619 + | hypothetical protein TERM 734 630199 - 630214 + G 82 -9 -3.95456 | TTTATGAAGATTTTA CGCGTA TTAT TACGCG TTTGATGTTGCCTTT C8J_0628 629703 - 631394 + | hypothetical protein TERM 735 631635 - 631657 + G 77 -10 -3.01712 | opp_overlap 631631, overlap 631632 TTATTTATAACCTTG CTTTTTGCAA ATT TTGCAGAAAG TATTGCAGAAGGAAG kdpB 631404 - 633449 + | potassium-transporting ATPase subunit B C8J_0630 633451 - 634059 + | potassium-transporting ATPase, C subunit, putative TERM 736 634684 - 634674 - g 70 -5.4 -4.56187 | TATAAGGAAAAACAA GCTA AAC TAGC ACTTGAAAATTTCTT TERM 737 635699 - 635687 - g 72 -2.7 -5.38054 | TCCTATAAATAAAAA CAATA TTT TATCG AAACCTTTGTTGTTT kdpD' 634062 - 635993 + | truncated KdpD protein uvrB 637961 - 635988 - | excinuclease ABC subunit B TERM 738 636319 - 636308 - G 70 -4.4 -5.00616 | TTTTTTTGCAAAAAA GCAA AACC TTGC CATTGACATTTCTAG C8J_0633 638115 - 638345 + | hypothetical protein C8J_0634 638335 - 638577 + | hypothetical protein C8J_0635 638574 - 639011 + | hypothetical protein TERM 739 639255 - 639269 + G 77 -7.2 -4.33739 | TTTATTATTATGCTT CAAAAC TTG GTTTTG TTTTGGGCTTTTTTG TERM 740 640619 - 640565 - g 93 -8.8 -4.94487 | TTAGAAAATAGAAAA GATCTTTATCCTCCATTTAAACGCCT TTT AAGAGTTCTTATAGAAGATAAAGATC AAAAAAATGCACAAA TERM 741 640645 - 640627 - g 90 -4.6 -5.66989 | overlap 640629 TAAAGATCAAAAAAA TGCACAAA AAC TTTGTGAA AAACTTGCCTATCAA priA 638993 - 640846 + | primosome assembly protein PriA C8J_0637 641597 - 640839 - | putative sugar nucleotidyltransferase TERM 742 641518 - 641538 + g 71 -6.9 -3.93367 | overlap 641533 TTTTTATTCTTATAC TCAACCATA CAC TTTGGTTGA TCTTTTGTTAAAGGC C8J_0638 642201 - 641599 - | hypothetical protein C8J_0639 644531 - 642192 - | hypothetical protein TERM 743 642521 - 642511 - G 70 -4 -4.93296 | CTATGATTATAAAAA GAAA AAA TTTC ATCGGCATTGCAAAG TERM 744 642897 - 642847 - G 90 -10.1 -3.90112 | gap 1, opp_overlap 642852 642856, overlap 642856 642888 TGTTCTCTAAGTAAA GCA-TTTAAAGCTTTTGTCTTTTC TTCT GAAAAAACAAAAGCTTTATCTTGC AAATAAACTTTACTA TERM 745 642852 - 642891 + g 100 -15.4 -3.04263 | opp_overlap 642847 642856 642888, overlap 642856 TCTAAGTAAAGCATT TAAAGCTTTTGTCTTTTC TTCT GAAAAAACAAAAGCTTTA TCTTGCAAATAAACT TERM 746 642887 - 642856 - G 100 -14 -3.74626 | opp_overlap 642852 642856, overlap 642847 AGTAAAGCATTTAAA GCTTTTGTCTTTTC TTCT GAAAAAACAAAAGC TTTATCTTGCAAATA TERM 747 642856 - 642887 + g 100 -11.8 -4.19624 | opp_overlap 642856 642847, overlap 642852 AGTAAAGCATTTAAA GCTTTTGTCTTTTC TTCT GAAAAAACAAAAGC TTTATCTTGCAAATA C8J_0640 645307 - 644546 - | methyltransferase TERM 748 645310 - 645357 + r 81 -7.4 -4.70046 | CTAGTTTTTGCATTT TATTTCCTTTTTTTCATC TTTGACAAGCTT GATGAAAAAAAGGAGGTA TTTTATGCTTTTCTA C8J_0641 646133 - 645360 - | hypothetical protein TERM 749 646009 - 646023 + g 88 -4.4 -5.69262 | opp_overlap 646009 CCTACTTCAACAATA TTTAAA TCT TTTAAA TTTTTATTTTTATCA TERM 750 646229 - 646216 - R 81 -5.3 -5.26119 | opp_overlap 646204 GGCGGAAAAATAAAA TTTCC ATTT GGAAA AATAAAACTTCCATA TERM 751 646259 - 646232 - R 76 -6.5 -4.59773 | opp_overlap 646232, overlap 646237 TTCCATTTGGAAAAA TAAAACTTCCA TAAAAG TGGAAATTTTA TTTTTCTACAAACCT TERM 752 646232 - 646259 + r 71 -5 -4.83169 | opp_overlap 646232 646237 TTCCATTTGGAAAAA TAAAACTTCCAT AAAA GTGGAAATTTTA TTTTTCTACAAACCT C8J_0642 646584 - 646417 - | hypothetical protein C8J_0643 647123 - 646818 - | hypothetical protein C8J_0644 647722 - 647297 - | hypothetical protein C8J_0645 647751 - 647891 + | hypothetical protein TERM 753 647917 - 647900 - f 73 -8.5 -3.20723 | opp_overlap 647900 TTTTTAGCAAGCTAA GAGAGTA AAAA TACTCTC TTTAATATTTAATTT TERM 754 647900 - 647917 + F 83 -8.5 -4.05229 | opp_overlap 647900 TTTTTAGCAAGCTAA GAGAGTA AAAA TACTCTC TTTAATATTTAATTT C8J_0646 648232 - 648333 + | hypothetical protein C8J_0647 648330 - 648881 + | hypothetical protein C8J_0648 649162 - 648878 - | hypothetical protein C8J_0649 649851 - 649222 - | phage repressor protein, putative TERM 755 649388 - 649403 + g 75 -4.8 -5.07523 | overlap 649398 TTAATCACACAAATG CTTTTA TTCT TAAAAG TTTTATTTCTATCTA TERM 756 650096 - 650059 - H 86 -3.9 -6.02546 | gap 1, overlap 650081 CTAAATTAAAAAAAA TTAATATATAATTCTAAT GAA ATTT-AATTATATATTAA AGGGATTTTAATGAA TERM 757 650134 - 650124 - g 72 -2.6 -5.36314 | opp_overlap 650124 GAAAATATTAAAAAA TAAA TAT TTTA TTCTGTGGATGATCG C8J_0650 650107 - 650406 + | hypothetical protein TERM 758 650613 - 650597 - g 91 -5.1 -5.78622 | TGATTTCAAAAAAAA TAATCCC TTG GGGCTTA AAAAACTTATAAAAT C8J_0651 650451 - 650660 + | hypothetical protein TERM 759 650828 - 650814 - T 75 -4.4 -5.19819 | AAATAAAATCAAAAA TAAAAA TAA TTTTTA AATAAATTGAAGTAA C8J_0652 652712 - 651321 - | invasion phenotype protein C8J_0653 653247 - 652723 - | adenylylsulfate kinase ispG 653370 - 654443 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 760 654477 - 654446 - T 84 -6 -5.093 | gap 1, opp_overlap 654454, overlap 654454 TGTAAAAGAATAAAA GCCAAGAAGCAAGGT TTA ACCTTGCTT-TTAGA ATGGCCATATCGCTT TERM 761 654470 - 654454 - T 93 -10.9 -3.84389 | opp_overlap 654454, overlap 654446 AATAAAAGCCAAGAA GCAAGGT TTA ACCTTGC TTTTAGAATGGCCAT TERM 762 654454 - 654470 + T 93 -10.9 -4.13945 | opp_overlap 654454 654446 AATAAAAGCCAAGAA GCAAGGT TTA ACCTTGC TTTTAGAATGGCCAT flgH 655171 - 654473 - | flagellar basal body L-ring protein TERM 763 654678 - 654667 - G 70 -5.8 -4.25104 | opp_overlap 654666 CTCCGTTGATTAAAA GCTC TCTT GAGC CTTCGATAAAATAAT TERM 764 656263 - 656275 + G 74 -6.3 -4.44277 | ATTTTCTTTATGGGG CTTGA AGA TCAAG TTTTAGCTTTTGCTG TERM 765 656642 - 656626 - g 95 -10.9 -3.87641 | opp_overlap 656623 656622 656621, overlap 656639 656640 AATATTTGTTACAAA GCAGTTC AAA GAACTGC TAATGCTTTAGCAAT pta 655264 - 656766 + | phosphate acetyltransferase ackA 656780 - 657967 + | acetate kinase C8J_0658 658038 - 658529 + | hypothetical protein C8J_0659 659455 - 658517 - | hypothetical protein TERM 766 659111 - 659127 + g 87 -2.3 -6.17669 | opp_overlap 659111, overlap 659097 TTTTTTTCTTCCAAA CGAAAAA ATC TTTTTAG TTTTTTTATTTTCTT TERM 767 659181 - 659192 + g 70 -4.4 -4.86902 | GAAAAAAATTTTTTA GCAA GAGA TTGC TTTTCTTCTAATTTA mraW 660387 - 659455 - | S-adenosyl-methyltransferase MraW TERM 768 659638 - 659650 + g 73 -3.5 -5.30189 | overlap 659643 GCAGTTTTTTGACCA TTTTT TGA AAAAA TTTTTTACTATTCTA TERM 769 659691 - 659704 + g 71 -2.4 -5.46698 | opp_overlap 659691 AATGAAAACTAATGA TTGC TAAAAT GCAA TTTTTTGGTTTTAAA C8J_0661 660552 - 662042 + | putative periplasmic protein ftsA 662045 - 663427 + | cell division protein FtsA TERM 770 663659 - 663648 - g 78 -3 -5.60993 | TTGGCGAGAAAAAAA CTAA AGGT TTAG GCGCTGGTATGCTTC ftsZ 663443 - 664555 + | cell division protein FtsZ TERM 771 664590 - 664569 - f 70 -7.4 -3.63266 | opp_overlap 664569 AAAATTGATTTTAAA GCAAGATT GAGTCA AATCTTGC TTTTTATAGTTTAAA TERM 772 664569 - 664590 + F 90 -7.4 -5.04325 | opp_overlap 664569 AAAATTGATTTTAAA GCAAGATT GAGTCA AATCTTGC TTTTTATAGTTTAAA flgG2 664710 - 665522 + | flagellar basal-body rod protein TERM 773 665562 - 665552 - g 70 -4 -4.88129 | opp_overlap 665552 AAAAAGGATTAAAAA TGAT GAG ATCA CTTCATACTGCTGCT flgG 665551 - 666342 + | flagellar basal body rod protein FlgG TERM 774 666378 - 666404 + T 100 -12.5 -4.57073 | opp_overlap 666383 TTTAATTCTTTTTTA TTTAATGGCGT GTTAA ACGCCATTAAA TTTTTAGCAAGAGTA glnA 667838 - 666408 - | glutamine synthetase, type I TERM 775 667610 - 667600 - G 83 -6.8 -5.13521 | AAAGGATCTAAAAAA GCAC TTT GTGC ATCAGGTTTTAAAAT C8J_0667 668041 - 668736 + | hypothetical protein TERM 776 669912 - 669897 - g 71 -4.8 -4.76802 | overlap 669893 GCTAAAAACAATAAA GAATTT AGCG AAATTC ATAGCGGTAATGAAC C8J_0668 668733 - 669986 + | peptidase, U32 family purE 669987 - 670481 + | phosphoribosylaminoimidazole carboxylase catalytic subunit C8J_0670 670491 - 671027 + | hypothetical protein glyQ 671039 - 671902 + | glycyl-tRNA synthetase subunit alpha TERM 777 672222 - 672244 + G 75 -7.2 -4.08064 | opp_overlap 672222, overlap 672226 ACTTATTTTACGGAA GAAATTTTAG GTT TTAAAATTTC TTTTAAAGACGAATT TERM 778 672339 - 672320 - g 80 -2.2 -5.75342 | CTGGGTGAAAAAAAA GTTAAATT TACA AATTTTAC GTGTAAGTGATTGTG C8J_0672 671889 - 672614 + | hypothetical protein TERM 779 673183 - 673168 - g 75 -4.7 -5.14563 | GTTTTTATGAAAAAA TTCGC AAATGG GCGAA AAATACTGCTGTAGT C8J_0673 672624 - 673340 + | hypothetical protein TERM 780 673366 - 673390 + G 72 -5 -4.71463 | TTATTTTTTAACTTG GACGGCAT TTTTATTTT GTGCCGTC TTTATTCTTTTGCTT TERM 781 673778 - 673789 + G 83 -3 -5.69976 | GATAAATCTTATCAT TCTT ATCA AAGA TTTTCTTTTTTTTAT TERM 782 673795 - 673811 + G 86 -5.3 -5.64304 | TTATCAAAGATTTTC TTTTTTT TAT AAAAAAA TTTTTTCTTATATTG waaA 673337 - 674494 + | 3-deoxy-D-manno-octulosonic-acid transferase TERM 783 674662 - 674642 - g 77 -4.8 -5.2197 | GATAAAAACCAAAAA TCCTCAAA TTATT TTTGAAGA TGATAAGATTATTGC C8J_0675 674475 - 675227 + | RNA pseudouridylate synthase family protein TERM 784 675410 - 675397 - g 74 -3.1 -5.49809 | overlap 675387 GAAACCTTAAAAAAA GCTCT TTTA AAAGC AGATGTTCACCATAA ffh 675295 - 676632 + | signal recognition particle protein TERM 785 676634 - 676673 + F 100 -8.3 -5.18355 | opp_overlap 676634 676669 GAAGGCAATTTTAAA TTTTATTTATAAATACT TTTTAT AGTATCTATAAATAAAA TTTTTAATTTTTAAG TERM 786 676673 - 676634 - f 89 -10.5 -3.67864 | opp_overlap 676634, overlap 676669 GAAGGCAATTTTAAA TTTTATTTATAAATACT TTTTAT AGTATCTATAAATAAAA TTTTTAATTTTTAAG rpsP 676697 - 676924 + | 30S ribosomal protein S16 C8J_0678 676927 - 677169 + | hypothetical protein rimM 677162 - 677701 + | 16S rRNA processing protein RimM TERM 787 678365 - 678353 - g 70 -6.3 -4.07568 | TGGCGTCTTGCAAAA CGAAA TTT TTTCG TCCAGATTTATTTTT trmD 677698 - 678402 + | tRNA (guanine-N(1)-)-methyltransferase rplS 678413 - 678769 + | 50S ribosomal protein L19 TERM 788 678760 - 678786 + F 80 -9.8 -3.31144 | opp_overlap 678767, overlap 678767 GCGTATTAAAGAGCT TAAAAAATAATT TAT AATTATTTTTTA TTATAAGCCTAACAA TERM 789 678779 - 678767 - f 70 -3.5 -5.10077 | opp_overlap 678767 678760 AAAGAGCTTAAAAAA TAATT TAT AATTA TTTTTTATTATAAGC TERM 790 678767 - 678779 + F 76 -3.5 -5.55769 | opp_overlap 678767, overlap 678760 AAAGAGCTTAAAAAA TAATT TAT AATTA TTTTTTATTATAAGC C8J_0682 678902 - 679315 + | transthyretin-like periplasmic protein TERM 791 680389 - 680375 - g 72 -8.6 -2.96984 | TAAATTTAGTATATA GCATAG ATC CTATGC ATGGAAATACAGTAA C8J_0683 679339 - 680679 + | 3-deoxy-7-phosphoheptulonate synthase TERM 792 680824 - 680814 - g 78 -4 -5.45802 | overlap 680808 TGGTTAAAACAAAAA TCTT TTG AAGA ACTTATCAATACTGC C8J_0684 680676 - 681005 + | hypothetical protein TERM 793 681006 - 681027 + F 100 -7.4 -5.5604 | opp_overlap 681008 681010 GAGAAAATGTTATGA TAGAGTGT TTGATT ACACTCTA TTTTTTATTAATTGA TERM 794 681197 - 681211 + F 70 -8.6 -2.5805 | overlap 681196 CGCTTTGTAGTTCTT CTGCAA CCC TTGCAG CTTGTGGGCGATAAT TERM 795 684236 - 684214 - g 70 -5.7 -4.30441 | gap 1 TGATAATATGGAAAA TCTTA-GCGA AGCA TCGCGTAAGA TGGCTGAAGTAAGAA TERM 796 684633 - 684621 - g 70 -6.3 -4.04608 | opp_overlap 684619, overlap 684619 AAGAAATAGAAAATA TCATC AAA GATGA AAATTTAAAAAATAA TERM 797 684777 - 684767 - g 88 -4 -5.68039 | AAAGCTATAAAAAAA TTTG GAG CAAA AAAAGATTTCAAAAA dnaE 681443 - 685045 + | DNA polymerase III subunit alpha TERM 798 685040 - 685067 + T 90 -8.6 -4.66609 | opp_overlap 685039 685040 685037, overlap 685041 ATTTCTAATAAATAT GCTTAAGTAAGA TTGT TCTTACTTAAGA TTTTTAAATAAAATG TERM 799 685067 - 685040 - T 71 -8.6 -2.80512 | opp_overlap 685040 685041, overlap 685039 685037 ATTTCTAATAAATAT GCTTAAGTAAGA TTGT TCTTACTTAAGA TTTTTAAATAAAATG TERM 800 685041 - 685066 + T 91 -12.1 -3.39483 | opp_overlap 685039 685040 685037, overlap 685040 TTTCTAATAAATATG CTTAAGTAAGA TTGT TCTTACTTAAG ATTTTTAAATAAAAT C8J_0686 685690 - 685058 - | hypothetical protein TERM 801 685702 - 685725 + r 79 -8.2 -3.85522 | opp_overlap 685704, overlap 685704 685707 TCATTTTGATAAAGA AATAAGCCCT ATTT AGGGCTTATA TTATTGTAATAAATT TERM 802 685704 - 685723 + r 87 -10.8 -3.50808 | opp_overlap 685704, overlap 685702 685707 ATTTTGATAAAGAAA TAAGCCCT ATTT AGGGCTTA TATTATTGTAATAAA TERM 803 685723 - 685704 - R 100 -10.8 -4.55697 | opp_overlap 685702 685704 685707 ATTTTGATAAAGAAA TAAGCCCT ATTT AGGGCTTA TATTATTGTAATAAA TERM 804 685707 - 685720 + r 79 -8.1 -3.87967 | opp_overlap 685704, overlap 685704 685702 TTGATAAAGAAATAA GCCCT ATTT AGGGC TTATATTATTGTAAT flaC 686475 - 685726 - | flagellin subunit protein FlaC C8J_0688 686983 - 686513 - | hypothetical protein TERM 805 686567 - 686554 - G 83 -2.4 -5.90231 | AGAAATATAAAAAAA CTTG CATTAT CAAG ATGATTTTAATCACC TERM 806 686919 - 686905 - G 95 -7.2 -5.86061 | opp_overlap 686904 686905 TTTGAGGAAAAAAAA TTGTTG GTG CAACAA CTATTCCTAGTATGA C8J_0689 687811 - 686996 - | modification methylase, HemK family TERM 807 687411 - 687423 + g 76 -6.3 -4.57341 | GCTTTGGGATTGATA TCACA GGC TGTGA TTTTTAACCCAAGTT C8J_0690 688995 - 687808 - | peptidase, M48 family TERM 808 688563 - 688551 - G 70 -6.3 -4.18351 | AAAGCAAAGCATAAA GGATT AAA AATCC AAATATTAAAGTTAA C8J_0691 689122 - 689307 + | hypothetical protein mog 689846 - 689304 - | molybdenum cofactor biosynthesis protein TERM 809 689586 - 689574 - G 74 -9.1 -2.80113 | opp_overlap 689573 689572 CATCATTTTATCACA CACGG CTT CCGTG GCTTCTGGGGTTACA TERM 810 689719 - 689733 + g 72 -2.9 -5.4251 | overlap 689715 GGGATTAATTCTTTA TGATA AATAA TATCA TTTTTTATATATGAA corA 690850 - 689867 - | magnesium/cobalt transporter CorA TERM 811 690501 - 690521 + g 73 -5.6 -4.59773 | GTGCTAAATTCGTTA TATCTTAT AGTAA ATAAGATA TTTTTAGCGGTAGCA C8J_0694 690967 - 692013 + | ABC transporter, periplasmic substrate-binding protein TERM 812 692143 - 692157 + G 72 -2.8 -5.43866 | opp_overlap 692138 TACAGTAAAACCTCC TAAGGA TGC TCCTGA TTTTTTTAAAACTTA C8J_0695 692024 - 693349 + | putative periplasmic protein TERM 813 693512 - 693526 + G 75 -7.1 -4.1899 | opp_overlap 693512 ACGAGTGCTTATTAA CAGGC GTAAA GCCTG TTTTAAGTGAGATAA C8J_0696 693349 - 694155 + | hypothetical protein C8J_0697 694152 - 694991 + | putative ABC transport system permease TERM 814 694995 - 694973 - f 70 -6.4 -4.13561 | CCTTTCTAAAAAATA TCATTTTAAG GTG CTTTAAATGA ATGAAAATTTGAGTT TERM 815 695161 - 695177 + G 72 -4.5 -4.92777 | opp_overlap 695161, overlap 695163 AATGGTATCAGGAAC TTTTTCA TGA TGAAAGA TTTTTACTTGCTCTT C8J_0698 694992 - 695771 + | ABC transporter, permease protein TERM 816 695893 - 695905 + G 72 -7.7 -3.6878 | TGGGCCCAAGTGGCT GTGGA AAA TCCAC TCTTTTAAGGTGTAT C8J_0699 695775 - 696764 + | ABC transport system ATP-binding protein TERM 817 696895 - 696876 - g 75 -4.4 -5.30686 | overlap 696878 696893 AATATTTAGAAAAAA TCGTTTTT TATC AAAAACAA TATCAAGAAAAAAAG TERM 818 697075 - 697090 + G 88 -7.6 -4.8622 | opp_overlap 697075 697074 AAGGTGTATTATAAT TTCAGC TACG GCTGAA TTTTTAGTTAGAAAA C8J_0700 696761 - 697399 + | HAD family hydrolase TERM 819 697425 - 697404 - T 87 -11.7 -2.53213 | opp_overlap 697404 697407, overlap 697407 TAACTTTTTAAGCTA TAAGCGTGA AAAT TCACGCTTA TTCTAATTCATATTT TERM 820 697404 - 697425 + T 91 -11.7 -3.57161 | opp_overlap 697404 697407, overlap 697407 TAACTTTTTAAGCTA TAAGCGTGA AAAT TCACGCTTA TTCTAATTCATATTT TERM 821 697422 - 697407 - T 77 -9 -3.41878 | opp_overlap 697404 697407, overlap 697404 CTTTTTAAGCTATAA GCGTGA AAAT TCACGC TTATTCTAATTCATA TERM 822 697407 - 697422 + T 83 -9 -3.90241 | opp_overlap 697407 697404, overlap 697404 CTTTTTAAGCTATAA GCGTGA AAAT TCACGC TTATTCTAATTCATA cjaC 698178 - 697423 - | CjaC TERM 823 698421 - 698399 - H 77 -5.8 -4.77986 | opp_overlap 698399 TTAAATATTGAAAAA TAAAATATCA AAT TAATATTTTA TTTTATAATCAACTC C8J_0702 698511 - 698723 + | hypothetical protein C8J_0703 698689 - 699162 + | hypothetical protein C8J_0704 699162 - 701090 + | hypothetical protein TERM 824 703792 - 703762 - g 75 -4.8 -5.09245 | overlap 703756 TCAAAATTATAAAAA TTACGCCAATCTTT ATG AAAAATGGACGCAA AAGAAAACTGCTATG C8J_0705 701102 - 704251 + | hypothetical protein TERM 825 704517 - 704491 - g 79 -5.9 -5.04082 | opp_overlap 704498, overlap 704494 TAAATAATAATAAAA TAAGAGAGCTT ATAGA AAGCTCTCCTG AAGCAAATGAACCAC TERM 826 704514 - 704494 - g 100 -9.8 -4.55653 | opp_overlap 704498, overlap 704491 ATAATAATAAAATAA GAGAGCTT ATAGA AAGCTCTC CTGAAGCAAATGAAC TERM 827 704592 - 704572 - g 85 -4.7 -5.59502 | TAAAAAATCAAAAAA GCCCTGTAA ATT TTAAAGAGC AAAATACTACAAATA C8J_0706 704418 - 706106 + | hypothetical protein TERM 828 706322 - 706352 + F 72 -3.4 -5.30686 | opp_overlap 706346, overlap 706323 ATTTTATAAATTAAC TCTTTTGGTTTTTA TCT TATAAACTAAAAGC TTTTTTATAAATCTT TERM 829 706569 - 706547 - f 72 -4.3 -4.99435 | opp_overlap 706547 TCTAATAATGAAAAA GATTAAAAA CTTTT CTTTTAATC TTTCATAACTTTTTC TERM 830 706597 - 706578 - f 72 -8 -3.31322 | TTTAATCTTTCATAA CTTTTTCT TTGA AGAAAAAG ATTAAACTATCTATA TERM 831 706634 - 706597 - f 72 -4.3 -5.06414 | opp_overlap 706604 TTCTTTGAAGAAAAA GATTAAACTATCTATAA TTTT TTATGGAGAGTTTGATC CTGGCTCAGAGTGAA TERM 832 706691 - 706708 + F 70 -8.5 -2.56596 | opp_overlap 706691 706690 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 833 706708 - 706691 - f 70 -8.5 -2.56343 | opp_overlap 706691, overlap 706690 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 834 708096 - 708113 + F 74 -9.1 -3.07291 | opp_overlap 708096 GTCGTAACAAGGTAA CCGTAGG AGAA CCTGCGG TTGGATCACCTCCTT TERM 835 708431 - 708415 - f 90 -5.9 -5.46657 | GATTTGAATAAAAAA GCTTTAA AAT CTAAAGC AAGTATATAAAGTAG TERM 836 708584 - 708604 + F 78 -6.9 -4.56187 | overlap 708586 TAATATATATACTTC CTTTAGGTT TTA AACCTAATG TTCTTTTTAATTATC TERM 837 708586 - 708602 + F 79 -8.1 -3.86437 | overlap 708584 ATATATATACTTCCT TTAGGTT TTA AACCTAA TGTTCTTTTTAATTA TERM 838 709201 - 709184 - f 91 -11.3 -3.66803 | opp_overlap 709183 709182, overlap 709177 GCGCAAGAGGGCAAA CCCAGTG CTTG CACTGGG GGTTGTAGGACTGCA TERM 839 711893 - 711903 + F 70 -5.4 -4.57341 | AATAAAGCATCACTT CCTT GTT AAGG TTTTTAAGAAGACTT C8J_0707 712514 - 713695 + | hypothetical protein TERM 840 714480 - 714520 + G 100 -16.5 -3.17571 | opp_overlap 714480, overlap 714492 GAAGCAATGAAGAAA GAGCTTATCAAATTTATCA AAA TGATGAATTTGTTAAGCTC TTAGATTGCGGAGTT TERM 841 714520 - 714480 - g 100 -14.3 -4.36343 | opp_overlap 714480 714492 GAAGCAATGAAGAAA GAGCTTATCAAATTTATCA AAA TGATGAATTTGTTAAGCTC TTAGATTGCGGAGTT hrcA 713912 - 714703 + | heat-inducible transcription repressor TERM 842 715188 - 715174 - g 89 -8.6 -4.56775 | ACCGTGCTTCAAAAA GGCTAT AAA ATAGCC GATCGCGTAATCCGC grpE 714700 - 715230 + | co-chaperone protein GrpE TERM 843 717106 - 717092 - g 85 -2.8 -5.98675 | overlap 717095 717097 GATAAAAAGAAAAAA GATGAC GAT GTAATC GACGCTGAAGTTGAG dnaK 715253 - 717124 + | molecular chaperone DnaK TERM 844 717137 - 717165 + F 100 -11.9 -5.15117 | opp_overlap 717144, overlap 717139 TAATCCTAAAATCTC TATTCAAGCCTTT TTA AAAGGCTTGAAAA TTTTTTAAAATTTTA TERM 845 717139 - 717163 + F 100 -14.5 -2.78839 | opp_overlap 717144, overlap 717137 ATCCTAAAATCTCTA TTCAAGCCTTT TTA AAAGGCTTGAA AATTTTTTAAAATTT TERM 846 717158 - 717144 - f 71 -8.6 -3.07575 | opp_overlap 717139 717137 AAAATCTCTATTCAA GCCTTT TTA AAAGGC TTGAAAATTTTTTAA TERM 847 717456 - 717421 - f 76 -6.6 -4.731 | gap 1, opp_overlap 717426 717430, overlap 717426 717430 AACTTAGTAATAAAA TAAAATTA-ATCTAAAA ACT TTTTAGATATAATCTTA ATAAACATAAAAGGA TERM 848 717451 - 717426 - f 78 -4.3 -5.28831 | gap 1, opp_overlap 717426 717430, overlap 717421 717430 AGTAATAAAATAAAA TTA-ATCTAAAA ACT TTTTAGATATAA TCTTAATAAACATAA TERM 849 717446 - 717430 - f 71 -6.7 -3.94607 | opp_overlap 717426 717430, overlap 717426 717421 ATAAAATAAAATTAA TCTAAAA ACT TTTTAGA TATAATCTTAATAAA C8J_0711 717477 - 718499 + | hypothetical protein C8J_0712 718569 - 718910 + | hypothetical protein TERM 850 718931 - 718969 + T 74 -5.6 -4.75404 | gap 1, opp_overlap 718937 718940, overlap 718930 718933 718937 TAAGGTTTTAATTTG C-CTAAATAATTCTAGG CTTTAA CCTAGAATTATTTATAG TTTTTAATGAAATTT TERM 851 718933 - 718966 + T 100 -12.8 -3.28472 | opp_overlap 718937 718940, overlap 718930 718931 718937 AGGTTTTAATTTGCC TAAATAATTCTAGG CTTTAA CCTAGAATTATTTA TAGTTTTTAATGAAA TERM 852 718937 - 718962 + T 86 -9.2 -4.27774 | opp_overlap 718937 718940, overlap 718930 718933 718931 TTTAATTTGCCTAAA TAATTCTAGG CTTTAA CCTAGAATTA TTTATAGTTTTTAAT TERM 853 718962 - 718937 - T 84 -9.9 -3.55622 | opp_overlap 718930 718937 718933 718931, overlap 718940 TTTAATTTGCCTAAA TAATTCTAGGC TTTA ACCTAGAATTA TTTATAGTTTTTAAT TERM 854 718959 - 718940 - T 74 -7.2 -3.91488 | opp_overlap 718930 718937 718933 718931, overlap 718937 AATTTGCCTAAATAA TTCTAGGC TTTA ACCTAGAA TTATTTATAGTTTTT aspB 720129 - 718960 - | aspartate aminotransferase TERM 855 719121 - 719135 + g 76 -2.9 -5.51046 | opp_overlap 719121, overlap 719109 TTTGACAAAAATTCA TAGAA TCTTT TTCTA TTTTTTGTATATTTA TERM 856 719411 - 719399 - G 70 -5.5 -4.26188 | overlap 719400 GCCATATAGCCAAAA CGCCA TCC TGGCA TAGCCCCGCATTTAC TERM 857 719648 - 719658 + g 83 -3.2 -5.71638 | AAAACCTTGGTTTTA GCTG TGA TAGC TTTTTTTAGTTGTTC cysE 720940 - 720302 - | serine acetyltransferase speA 722773 - 720941 - | arginine decarboxylase TERM 858 721246 - 721258 + g 72 -4.9 -4.89852 | CAAGAAAAAACCCTA GAAAA TAA TTTTC TTTTTCTACATCTAC hisS 723999 - 722773 - | histidyl-tRNA synthetase tmk 724574 - 723996 - | thymidylate kinase TERM 859 724064 - 724075 + g 83 -3 -5.79595 | opp_overlap 724064, overlap 724072 CGTCAAGTGTTAAAA TTTC TATA GAAA TTTTTTCTTTTAAAA kdtB 725041 - 724565 - | phosphopantetheine adenylyltransferase C8J_0719 725644 - 725081 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C8J_0720 726303 - 725641 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 860 726375 - 726363 - R 77 -7.7 -4.21989 | opp_overlap 726363 TATAAGTTTAACAAA GCCTT TAG AAGGC TTTGTATAGAGTTAA TERM 861 726363 - 726375 + r 75 -7.7 -4.06491 | opp_overlap 726363 TATAAGTTTAACAAA GCCTT TAG AAGGC TTTGTATAGAGTTAA C8J_0721 727163 - 726387 - | lipoprotein, NLPA family C8J_0722 727943 - 727173 - | lipoprotein, NLPA family TERM 862 727987 - 727971 - R 90 -5.8 -5.4833 | GTATTTAAGAAAAAA GTCCCC AGGTA AGGGAC AAAATTAAAAAGCAG C8J_0723 728765 - 727992 - | lipoprotein, NLPA family TERM 863 728939 - 728959 + r 78 -6.9 -4.58685 | opp_overlap 728942, overlap 728942 CTTATATTTATCTTA AAAGGAGAT ATA ATCTCCTTA TTTTTCGAAACCTTT TERM 864 728956 - 728942 - R 83 -8.6 -4.15006 | opp_overlap 728942 728939 ATATTTATCTTAAAA GGAGAT ATA ATCTCC TTATTTTTCGAAACC TERM 865 728942 - 728956 + r 85 -8.6 -4.40561 | opp_overlap 728942, overlap 728939 ATATTTATCTTAAAA GGAGAT ATA ATCTCC TTATTTTTCGAAACC C8J_0724 729883 - 728957 - | ABC transporter permease C8J_0725 730875 - 729865 - | ABC transporter ATP-binding protein valS 733492 - 730880 - | valyl-tRNA synthetase TERM 866 730916 - 730926 + g 70 -4 -4.89729 | TTCAACTGATATTTT TTCA AGT TGAA TTTTTAAATTTTCTA TERM 867 731014 - 731042 + g 100 -9.1 -5.79588 | opp_overlap 731017 TTGAAAGCATGGAGT TAAGCTTGAAA CTTTCTT TTTCAAGCTTA TTTTTTTGATTTTCA TERM 868 731134 - 731146 + g 72 -4.1 -5.10461 | CGCTAACATCACATA TTGCC TTT GGTAA TTTTTCTTCACTAAA C8J_0727 734534 - 733515 - | hypothetical protein TERM 869 736634 - 736618 - g 72 -4.5 -5.00846 | TAAATATGATAAAAA CAAAAAA ACT TCTTTTG CTCCTTCTCGTTTTC C8J_0728 734663 - 736693 + | putative ATP-dependent DNA helicase TERM 870 737221 - 737211 - g 72 -2.6 -5.36364 | GTAAAAATATAAAAA TTTA TGC TAAA AATTCCAAAGCTGCT C8J_0729 736742 - 737482 + | major antigenic peptide PEB2 tpx 737580 - 738107 + | thiol peroxidase TERM 871 738114 - 738136 + F 89 -7.8 -4.75308 | opp_overlap 738118 TGCCATTAATTTTGA TTAAGCCC ATTCTTA GGGCTTAA TTTTTACATCTTCAT TERM 872 739341 - 739363 + G 72 -7.8 -3.69069 | overlap 739347 GTAATCACTTTAGAC GATGAAGAGG CTA CTTCTTTATC TTATCTTGGCGTTAA napA 738354 - 741128 + | nitrate reductase napG 741146 - 741886 + | quinol dehydrogenase periplasmic component napH 741886 - 742665 + | quinol dehydrogenase membrane component napB 742665 - 743186 + | periplasmic nitrate reductase small subunit (cytochrome C-type protein) TERM 873 743193 - 743203 + G 78 -4 -5.48213 | opp_overlap 743193 GTAAAGTAAATAAAT GAAA AAA TTTC TTTTTATTTTGAGTC TERM 874 743344 - 743369 + G 74 -8.5 -3.54459 | opp_overlap 743344 743362 743363, overlap 743363 CAATATAACATTAAA GATAAAAGTTT AAAA GAACTTTTATC TTTGCCAAAGATTAA TERM 875 743369 - 743344 - g 76 -7.8 -4.00882 | opp_overlap 743344 743363, overlap 743362 743363 CAATATAACATTAAA GATAAAAGTT TAAAAG AACTTTTATC TTTGCCAAAGATTAA C8J_0735 743191 - 744105 + | putative periplasmic protein napD 744098 - 744436 + | NapD TERM 876 744564 - 744554 - g 82 -4 -5.54403 | opp_overlap 744554, overlap 744563 AAAAAAGAACAAAAA GAAT TAA ATTC TAGCTTAGAGAAAGA C8J_0737 744446 - 744619 + | hypothetical protein TERM 877 744614 - 744602 - f 77 -4.9 -5.09685 | GAATATATAGAAAAA TTGTT TAA AACAA AATAGACATTAAAAA C8J_0738 744701 - 744946 + | hypothetical protein C8J_0739 744943 - 745434 + | hypothetical protein TERM 878 745612 - 745623 + GF 83 -3 -5.76633 | ATTGGGCGCACAAGG CTTT GGAA AAAG TTTTTTTGTGTATAA C8J_0740 745403 - 746521 + | polyA polymerase family protein TERM 879 746865 - 746845 - g 88 -9.1 -4.04326 | opp_overlap 746843 746845 GAAGCAAATATCAAA GCTGTGATT TCA AATCACAAC TCTTTAAAGGATTTA purU 746518 - 747342 + | formyltetrahydrofolate deformylase C8J_0742 748607 - 747339 - | aminotransferase, putative TERM 880 749189 - 749199 + G 78 -4 -5.45802 | overlap 749195 AAGGAAAAATTTGAG CTTT ATC AAAG TTTTTGTTTTGAACA C8J_0743 748694 - 749527 + | hypothetical protein C8J_0744 749531 - 750550 + | sensor histidine kinase C8J_0745 750648 - 751970 + | hypothetical protein murF 753456 - 752029 - | Mur ligase family protein C8J_0747 754176 - 753457 - | hypothetical protein C8J_0748 754393 - 754178 - | prevent-host-death family protein TERM 881 754408 - 754437 + r 89 -9.5 -4.27316 | opp_overlap 754408 TTTTTCTTCCTAAAA TACGCTAAATTTT ATGT ATAATTTAGCGTA TTTTGACTTAAAAGC TERM 882 754437 - 754408 - R 87 -9.5 -4.07568 | opp_overlap 754408 TTTTTCTTCCTAAAA TACGCTAAATTTT ATGT ATAATTTAGCGTA TTTTGACTTAAAAGC ddlA 755493 - 754453 - | D-alanyl-alanine synthetase A ruvA 756054 - 755503 - | Holliday junction DNA helicase RuvA C8J_0751 757889 - 756030 - | hypothetical protein TERM 883 756252 - 756265 + g 76 -5.3 -5.055 | opp_overlap 756252 TTTATTTATAAAAGT TGCTT CAAA AAGCA TTTTTTGCAAATTGA TERM 884 757327 - 757351 + g 70 -6.5 -4.05033 | opp_overlap 757327 GTTTTTTCTTTATAA GTCAAGATCAG GGA TTCATCTTGAC TTTCTATAGGATCAA TERM 885 758877 - 758861 - g 70 -5.3 -4.56597 | TTTCTTTTCCAAAAA TTTTAAA ACA TTTAAAA AGTGGTCAAGAAAAT TERM 886 758974 - 758992 + G 90 -8.2 -4.86731 | opp_overlap 758984 ATAGGTTCTGCGTTT GCTTTGGA AAT TTCAAAGC TTTTATTTGAAAGAG TERM 887 759245 - 759257 + G 74 -3.3 -5.38326 | CAGTAGCACTTTCAA GCTCT ATT AGTGC TTTTTATTTGCTTGG mviN 757993 - 759444 + | integral membrane protein MviN cysS 759444 - 760832 + | cysteinyl-tRNA synthetase TERM 888 761303 - 761321 + G 80 -2.4 -5.73563 | overlap 761304 761305 TTGCGGTAGTCTTGT ATCAAAGT CCT ACTTTGGC TTTTTTTGCTTTAGT msbA 760825 - 762567 + | lipid export ABC transport protein TERM 889 762562 - 762548 - f 86 -5 -5.74086 | opp_overlap 762548 762548 AAAGCAAAGAAAAAA CAAAGC CTA GCTTTA GTTAATTTTAGTTAG pyrD 762599 - 763657 + | dihydroorotate dehydrogenase 2 C8J_0756 763654 - 764904 + | peptidase, M16 family dapA 764897 - 765793 + | dihydrodipicolinate synthase C8J_0758 765793 - 766572 + | 7-alpha-hydroxysteroid dehydrogenase TERM 890 766603 - 766576 - T 100 -11.6 -5.27938 | opp_overlap 766574 766594, overlap 766594 ACTTTTAAATAAAAA TTAAGAAAAATC AATG GATTTTTCTTAA AAATATTTTTCAATC C8J_0759 766918 - 766613 - | hypothetical protein C8J_0760 767527 - 766931 - | metallo-beta-lactamase family protein nadE 767601 - 768341 + | NAD+ synthetase lpxK 768345 - 769271 + | tetraacyldisaccharide 4'-kinase TERM 891 770178 - 770166 - g 80 -6.3 -5.00884 | opp_overlap 770166 770164 ATTTGCGTGAAAAAA GTCTT AAG AAGAC TATTTCTCCAGCTAT thrC 769268 - 770680 + | threonine synthase TERM 892 771320 - 771308 - g 76 -2.7 -5.51165 | AAAATGGTAAAAAAA TCAAA ATG CTTGA AATTTCAACAACAAG kdsB 770665 - 771396 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 893 772721 - 772707 - g 83 -8.6 -4.15396 | GCTGAAATTAAACAA GCCATT GCC AATGGC TGGAAAGCAAAACCT C8J_0765 771483 - 772808 + | hypothetical protein C8J_0766 772902 - 773672 + | amino acid-binding protein TERM 894 773673 - 773687 + T 73 -8.6 -3.17194 | opp_overlap 773661, overlap 773662 GAATTCTTTTTCTAA GAAGGA TTT TCCTTC TTAAGTTACAAAGCT fliP 774422 - 773688 - | flagellar biosynthesis protein FliP TERM 895 774769 - 774750 - g 70 -4.4 -4.85782 | overlap 774758 774760 GCGTTGAAAAAGAAA TTTTAGAA TATT TTCCAAAA ACACAAATTTTAGAG glmU 774566 - 775855 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 896 776840 - 776830 - g 72 -4 -5.15117 | GAAAATGCGAAAAAA TCTT TAA AAGA TAAGCAACTTGATAT TERM 897 776962 - 776948 - g 76 -8.6 -3.39657 | overlap 776946 ATGAAAATAAAAGCA CTTTGC AAA GCAAAG AAAAATTGGCATTTG dfp 775852 - 777006 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 898 777499 - 777527 + G 83 -7.6 -4.66163 | overlap 777496 CGCAAGGCATTAGTG TTTTTACACCTT TTGCT AAGGTGCAAAAA TTTTTAAATGAACAT C8J_0770 777003 - 777620 + | hypothetical protein uppS 777624 - 778292 + | undecaprenyl diphosphate synthase TERM 899 778539 - 778563 + G 83 -6.6 -5.14894 | GTATAATTTTGCTTA TTTTGGCTTA TTCTT TAAGTCAAAA TTTTTATGATTTTTT C8J_0772 778322 - 779065 + | A24 family peptidase C8J_0773 779065 - 780090 + | hypothetical protein truA 780090 - 780812 + | tRNA pseudouridine synthase A ilvA 782020 - 780809 - | threonine dehydratase C8J_0776 782433 - 782020 - | CoA-binding domain-containing protein C8J_0777 782552 - 782968 + | hypothetical protein TERM 900 782997 - 782973 - T 75 -7.2 -4.1552 | opp_overlap 782975 TACCTTGCTAAGAAA TACTCCGCAT TCAAG ATGTGGAGTA TTGACAAATTGATCA TERM 901 782975 - 782995 + T 71 -8.3 -3.04501 | opp_overlap 782973 CCTTGCTAAGAAATA CTCCGCATT CAA GATGTGGAG TATTGACAAATTGAT trmA 784028 - 782955 - | tRNA (uracil-5-)-methyltransferase C8J_0779 785758 - 784025 - | Na+/H+ antiporter family protein C8J_0780 786504 - 785755 - | short chain dehydrogenase/reductase family oxidoreductase TERM 902 785874 - 785852 - G 71 -7.8 -3.40611 | opp_overlap 785856, overlap 785850 GGTAGGTTAATAATA GACATTACCA CTT TGGCAATATC ATTAGCACTGATAAA C8J_0781 787739 - 786501 - | ankyrin repeat protein acnB 790345 - 787799 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase ogt 790400 - 790852 + | methylated-DNA--protein-cysteine S-methyltransferase C8J_0784 791785 - 790844 - | hypothetical protein TERM 903 791466 - 791454 - G 78 -4.1 -5.46706 | ATGTTAAAATAAAAA GCCTT GCA AAGAC TTAGTTCGTAAGATT TERM 904 791664 - 791688 + g 76 -10.1 -2.74853 | opp_overlap 791669, overlap 791663 791659 791669 TCTTTTTTATCGTTA TTAAAGAAGGC AAA GCCTGCTTTAA GTTCGTTTAAATTTA metS 793675 - 791789 - | methionyl-tRNA synthetase TERM 905 792360 - 792340 - G 72 -6.9 -4.07568 | opp_overlap 792358, overlap 792343 TTGTTTTGGCTAAAA TATTTGCAC AAA GTGCAACTA AAGCGTTAGCTTGTT TERM 906 792357 - 792343 - G 71 -8.6 -2.78032 | overlap 792340 TTTTGGCTAAAATAT TTGCAC AAA GTGCAA CTAAAGCGTTAGCTT TERM 907 793473 - 793461 - G 72 -6.3 -4.35524 | opp_overlap 793460 TTTTTAAATTCAAAA CTGAT TTT ATCAG CATATTCTTGAGGAG C8J_0786 793882 - 793685 - | hypothetical protein fbp 794717 - 793875 - | fructose-1,6-bisphosphatase mobB 795210 - 794719 - | molybdopterin-guanine dinucleotide biosynthesis protein MobB TERM 908 795675 - 795651 - gR 72 -8.7 -2.93089 | GATTATTTTAAAGTA TCTCTTCCT AATGTCA AGGAAGAGA CTAAGCTTGTAACTA C8J_0790 797313 - 795688 - | soluble lytic murein transglycosylase, putative C8J_0789 795306 - 795791 + | putative lipoprotein TERM 909 796216 - 796230 + gT 84 -5.8 -5.11937 | opp_overlap 796215 796218, overlap 796195 ATTGTCATAATAAGG CATTAT AAA ATAATG TTTTTTAAAATTATT TERM 910 796699 - 796711 + gT 72 -2.7 -5.45813 | overlap 796692 TTCTAGCATAGAATG TCTAA ATT TTGGA TTTTCTTTTTTAATA C8J_0791 797591 - 797310 - | YGGT family protein gltX 798889 - 797594 - | glutamyl-tRNA synthetase C8J_0793 799008 - 800099 + | Ser/Thr protein phosphatase family protein psd 800096 - 800896 + | phosphatidylserine decarboxylase C8J_0795 801174 - 800893 - | FlhB domain protein C8J_0796 803420 - 801171 - | hypothetical protein C8J_0797 804600 - 803413 - | major facilitator family protein C8J_0798 805081 - 804578 - | hypothetical protein TERM 911 804978 - 804966 - G 95 -6.3 -5.69023 | AAAACACTAAAAAAA GCTAT TTC ATAGC TTAAAAATGTATCTA C8J_0799 805410 - 805081 - | hypothetical protein hemL 806681 - 805407 - | glutamate-1-semialdehyde aminotransferase TERM 912 805711 - 805732 + g 79 -5.2 -5.29885 | TTTTTTGCTAATTTT CCAAGTTT GTCATA AAGCTTGG TTTTCTTTTTGGCTT TERM 913 806653 - 806666 + g 80 -2.4 -5.73978 | GCGATGAATTTACAC GCTT CTTTAA AAGC TTTTTTGTTTGTCAT C8J_0801 807025 - 806678 - | hypothetical protein TERM 914 806806 - 806788 - G 73 -9 -3.15544 | opp_overlap 806778 CTTTACTCTGATTAA GAGAATTT TTA AAATTCTC AAAACTAAGATTTTG TERM 915 807177 - 807167 - g 91 -4 -6.11229 | ATTAAAAGAAAAAAA TCAA TTT TTGA AAAGCAAAGGGATTG folD 807105 - 807953 + | folD bifunctional protein TERM 916 808493 - 808461 - g 71 -2.2 -5.48825 | gap 2, overlap 808463 808465 808467 TATGATCCAAAAAAA GATATAGAAAGCGATA TTT TA-CGCTTTCT-TAGC ATAGGTGATTTTGCC lepP 807963 - 808811 + | signal peptidase I TERM 917 808809 - 808835 + T 95 -11.1 -3.90316 | opp_overlap 808807 808812, overlap 808807 808812 GAGGATAAATTAAGC TAATGTTTGTG AAAAA CACAAACATTA TATTTTTAAAAGCGT TERM 918 808832 - 808812 - T 73 -8.4 -3.27667 | opp_overlap 808812 808809 808807, overlap 808807 GATAAATTAAGCTAA TGTTTGTG AAAAA CACAAACA TTATATTTTTAAAAG TERM 919 808812 - 808832 + T 83 -8.4 -4.07746 | opp_overlap 808807 808812, overlap 808809 808807 GATAAATTAAGCTAA TGTTTGTG AAAAA CACAAACA TTATATTTTTAAAAG TERM 920 808848 - 808862 + T 74 -2.8 -5.64006 | opp_overlap 808847 808848, overlap 808849 TTATATTTTTAAAAG CGTGAT TTC ATCACC TTTTTTTAATTCACT C8J_0804 809993 - 808833 - | molybdopterin biosynthesis MoeA protein, putative murA 811246 - 809990 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 921 811295 - 811263 - R 76 -6.6 -4.56597 | gap 1, opp_overlap 811263 TTTTTCCTTGAAAAA GTTTAAAAATGC-AT CATT ATAGCATTCTTAAAC TTTTGAAAAAATATA C8J_0806 811740 - 811312 - | hypothetical protein TERM 922 812449 - 812467 + G 100 -9 -5.71712 | opp_overlap 812446 GGGTTTAATTCACTA TGCTTTTA ACT TAAAAGCA TTTTTTTCTATGGGC C8J_0807 811835 - 812707 + | integral membrane protein pabA 813260 - 812694 - | para-aminobenzoate synthase glutamine amidotransferase, component II TERM 923 813024 - 813036 + g 85 -3.5 -5.79526 | overlap 813035 TCCTAAACATATACC TAAAA TTT TTTTA TTTTTTTTAAAATAT pabB 815041 - 813257 - | para-aminobenzoate synthase glutamine amidotransferase, component I TERM 924 813510 - 813498 - G 72 -2.7 -5.40072 | TTTTCGTTAAAAAAA GCTAT GTC ATAAC ACAAGTTTTGTTGCC TERM 925 814801 - 814812 + g 74 -3 -5.40072 | CGATATCTTCTTTTT GAAA TTTT TTTC TTTTTTTAAAAGCAA TERM 926 814927 - 814909 - G 74 -6.2 -4.36411 | opp_overlap 814909 CAGCAAGCATTAAAA TATAAAAA TCA TTTTTATA TTTTTCTATAAATTT TERM 927 814909 - 814927 + g 81 -6.2 -5.01546 | opp_overlap 814909 CAGCAAGCATTAAAA TATAAAAA TCA TTTTTATA TTTTTCTATAAATTT C8J_0810 816095 - 815031 - | phage integrase family site specific recombinase TERM 928 816173 - 816188 + H 74 -4.8 -5.01422 | opp_overlap 816173 CTTAGTAAAAAAAAG CTTTTT TAGG AAAAAG TTTGTTTTTATATAC TERM 929 816702 - 816690 - H 77 -4.9 -5.17507 | overlap 816680 AAAACTTAATAAAAA GTTTT ATC AAAAC CAAATTTCAAGGAGA dsbA 816723 - 817385 + | thiol:disulfide interchange protein DsbA TERM 930 817979 - 817993 + G 79 -5 -5.25799 | ATGAATATGGCAATT TGCTGT CTT ATAGCA TTTTTATGTTGTTTT dsbB 817397 - 818179 + | putative disulfide oxidoreductase TERM 931 818220 - 818194 - f 90 -10.3 -4.1413 | opp_overlap 818194 818186 AAGATACTCTTAAAA TACGCAACAAA TTATT TTTGCTGCGTA TTATTAAAATTTTAT TERM 932 818194 - 818220 + F 76 -8.1 -3.73709 | opp_overlap 818194, overlap 818186 AAGATACTCTTAAAA TACGCAACAAA TTATT TTTGCTGCGTA TTATTAAAATTTTAT TERM 933 819544 - 819531 - g 76 -2.5 -5.60993 | GTCGTGATAAAAAAA TAAAA TGGA TTTTA GGAGCACATAAAGGG C8J_0813 818279 - 820141 + | arylsulfate sulfotransferase TERM 934 820141 - 820174 + F 100 -5.4 -5.81412 | opp_overlap 820139 820142 820145, overlap 820145 820171 CAATCTTAAAAAATA ACAATAAGCCCAAA AATAAA TTTGGGCTTATTTA TTTTTTTTAAATAAA TERM 935 820173 - 820142 - f 91 -8.9 -4.63993 | opp_overlap 820141 820145 820171, overlap 820139 820145 AATCTTAAAAAATAA CAATAAGCCCAAA AATAAA TTTGGGCTTATTT ATTTTTTTTAAATAA TERM 936 820170 - 820145 - f 93 -10.6 -4.40692 | opp_overlap 820145 820141, overlap 820142 820139 CTTAAAAAATAACAA TAAGCCCAAA AATAAA TTTGGGCTTA TTTATTTTTTTTAAA TERM 937 820145 - 820170 + F 100 -10.6 -5.33985 | opp_overlap 820142 820139 820145, overlap 820141 CTTAAAAAATAACAA TAAGCCCAAA AATAAA TTTGGGCTTA TTTATTTTTTTTAAA C8J_0814 820227 - 820868 + | thiol:disulfide interchange protein DsbA, putative TERM 938 820871 - 820904 + T 90 -6.9 -5.2112 | opp_overlap 820873 820874, overlap 820874 CAATATGAAATAATA AATTTTTAAGGCAAT AAAA ATTGCCTTAAAATTA TTTTTTGATCATATT TERM 939 820902 - 820873 - T 95 -9.5 -4.61162 | opp_overlap 820871 820874, overlap 820874 ATATGAAATAATAAA TTTTTAAGGCAAT AAAA ATTGCCTTAAAAT TATTTTTTGATCATA TERM 940 820874 - 820901 + T 100 -13 -4.68456 | opp_overlap 820873 820874, overlap 820871 TATGAAATAATAAAT TTTTAAGGCAAT AAAA ATTGCCTTAAAA TTATTTTTTGATCAT TERM 941 820901 - 820874 - T 100 -13 -3.35071 | opp_overlap 820874 820871, overlap 820873 TATGAAATAATAAAT TTTTAAGGCAAT AAAA ATTGCCTTAAAA TTATTTTTTGATCAT C8J_0815 821888 - 820902 - | hypothetical protein C8J_0816 822098 - 822238 + | hypothetical protein C8J_0817 822858 - 822226 - | putative periplasmic protein TERM 942 822288 - 822319 + g 75 -6 -4.69326 | overlap 822289 CTTTAAAAGAAGGTG ATTGGATAAATAGT TTGC ACTCTTTATCCAAA TTTTCTATTCCGTAT TERM 943 822289 - 822318 + g 79 -9.5 -3.40511 | overlap 822288 TTTAAAAGAAGGTGA TTGGATAAATAGT TTGC ACTCTTTATCCAA ATTTTCTATTCCGTA C8J_0818 823097 - 822855 - | hypothetical protein TERM 944 823036 - 823016 - G 100 -9.1 -4.4009 | CTCCAGCGTATAAAA GCATAGCTT CTA AAACTATGC TAAGCTCATATTGTA C8J_0819 824127 - 823081 - | hypothetical protein TERM 945 824076 - 824066 - G 72 -2.6 -5.45802 | TTTTTAAAATAAAAA TTTA CTA TAAA TTGACAAGCATAACC flhA 826310 - 824136 - | flagellar biosynthesis protein A TERM 946 825977 - 825990 + g 70 -5.9 -4.20354 | overlap 825985 CTATAATCTCACTCA CGGCT TCAG GGCCG TTTTGCCCTTCGCTT TERM 947 826174 - 826161 - G 70 -3.8 -5.16151 | opp_overlap 826161 TAAAGCTAAGAAAAA GTCC AAAATA GGAC TTGGTAAAGGAACTA C8J_0821 826707 - 826297 - | hypothetical protein TERM 948 826593 - 826559 - G 76 -9.6 -2.66106 | opp_overlap 826558 826557 826560, overlap 826555 GATTTTAACAAGCCA TCTTTAGCTAAAGTTT GTA AAATTTTAGCTAAAAA ACTTTTAGGAATATC TERM 949 826949 - 826936 - g 70 -3.8 -5.03747 | AAATTCGCTAAAAAA CCAG GTGATA CTGG TTCAACAGAAGTTCA rpsO 826882 - 827154 + | 30S ribosomal protein S15 ftsK 830076 - 827236 - | putative cell division protein TERM 950 829353 - 829368 + g 77 -9 -3.63991 | TTTTACTAGCTTTTT GTGCGA AATT TCGCAC TTGTTGAGAATGCTC TERM 951 829804 - 829788 - G 72 -5.1 -4.71222 | ATAGTAAAAGCAAAA GAGCGAA AAT TCCACTC CCTGTATGCCCTAAG TERM 952 830014 - 829999 - G 72 -4 -5.02357 | TATAAGCAAAGAAAA TGGATA ATAA TACCCA AATTCTCCAAATAAA flaD 832434 - 830185 - | flagellar hook-associated protein FlgL TERM 953 830248 - 830264 + g 78 -9.5 -3.22409 | opp_overlap 830241, overlap 830242 AAGAGAAGCTTGATA TGCAAGT TGA ACTTGCA TTAAATTCATCATTG TERM 954 832753 - 832737 - R 75 -9.5 -2.62983 | overlap 832740 CTCAGGGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA C8J_0825 834747 - 832816 - | ABC transporter ATP-binding protein TERM 955 833426 - 833416 - G 70 -5.4 -4.65895 | GCTTTTATCTAAAAA TTCC TTA GGAA ATAAAAAATTTTTCA TERM 956 833702 - 833713 + g 74 -3 -5.42164 | opp_overlap 833702, overlap 833696 ATACGCGTTGAAAAA TCTT TAAA AAGA TTTTTATTGTTTATA TERM 957 833864 - 833880 + g 89 -9.5 -4.29049 | overlap 833861 TTTTTCGCTTCTTCA CGCATTT TAA AAATGCG TTCTTTTCGTCCTTC TERM 958 834537 - 834548 + g 70 -4.4 -4.89729 | opp_overlap 834526 834525 834537, overlap 834531 CAACGCTTTGTGAAA GCAT GGCT ATGC TTTTTCCATTTTGTC TERM 959 834700 - 834711 + g 74 -3 -5.43866 | TTCATTTAAAACTAT TTTG TCTC CAAA TTTTTTTGAAGCTTC C8J_0826 836040 - 834751 - | sensor histidine kinase TERM 960 835901 - 835913 + g 76 -2.7 -5.54885 | AATTTTAAAACATCA TCAAG ACT TTTGA TTTTTTGTTCATATT C8J_0827 836705 - 836034 - | DNA-binding response regulator serA 838266 - 836683 - | D-3-phosphoglycerate dehydrogenase C8J_0829 838703 - 838263 - | hypothetical protein rpsA 840421 - 838751 - | 30S ribosomal protein S1 lytB 841386 - 840553 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase aroA 842647 - 841376 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 961 842183 - 842200 + g 79 -7.1 -4.4267 | overlap 842193 AGCCGAAGAAATTTC GCTTTTA TAGT TAAAAGC TTTTAAATTTTGACC pheT 844980 - 842659 - | phenylalanyl-tRNA synthetase subunit beta TERM 962 842783 - 842765 - G 72 -2.5 -5.45802 | overlap 842766 TCCCTAAAAGAAAAA CTTATAG TAATG CTATAAA ATTCTTTAAGGTTTT TERM 963 843890 - 843906 + g 70 -8.1 -3.18274 | AGCAAAAAATCCATT CCTAAAT TTA ATTTAGG TTCACTTCCCCTAAA pheS 845969 - 844977 - | phenylalanyl-tRNA synthetase subunit alpha C8J_0835 846092 - 846457 + | HIT family protein TERM 964 846455 - 846489 + T 91 -10.3 -4.37886 | opp_overlap 846464, overlap 846458 CCTCAAGCTTTATTT TAATTTAAATGGTAG AAAAA CTACCATTTAAACTA TTTTGTCAAAGGTAG TERM 965 846458 - 846486 + T 88 -12 -2.8733 | opp_overlap 846464, overlap 846455 CAAGCTTTATTTTAA TTTAAATGGTAG AAAAA CTACCATTTAAA CTATTTTGTCAAAGG thiJ 847056 - 846487 - | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein C8J_0837 847195 - 847049 - | hypothetical protein C8J_0838 847311 - 848054 + | amino acid ABC transporter permease TERM 966 848411 - 848395 - g 93 -5.9 -5.66684 | GAAGCCATAAAAAAA GCAAAAA TAC TTCTTGC TAAGGTGGGTTTAGC glnQ 848047 - 848775 + | amino acid ABC transporter ATP-binding protein TERM 967 848800 - 848776 - T 90 -11.6 -3.32769 | opp_overlap 848776, overlap 848769 GTTTTAAATCATTAA TTCATAAGCC ATTAA GGCTTATGAA TTTTAATCCCAACAT TERM 968 848776 - 848800 + T 100 -11.6 -4.25283 | opp_overlap 848769 848776 GTTTTAAATCATTAA TTCATAAGCC ATTAA GGCTTATGAA TTTTAATCCCAACAT C8J_0840 850269 - 848803 - | putative amino-acid transport protein TERM 969 849924 - 849898 - G 93 -11.7 -3.09234 | gap 1 ATAAACTTGAGCTAA GGTGCTTTCAGC AAAT GCTGAA-GCACC ACCAAAAAATGCCAT C8J_0841 850840 - 850373 - | RNA methyltransferase alr 851829 - 850843 - | alanine racemase C8J_0843 852807 - 851830 - | hypothetical protein TERM 970 853069 - 853049 - g 70 -4.1 -4.96845 | overlap 853050 ATAAAAAGAAAGAAA GTGTATTTA GCT TAAATACAT GCCAACCTCTAACTT TERM 971 853068 - 853050 - g 72 -7.6 -3.54447 | overlap 853049 TAAAAAGAAAGAAAG TGTATTTA GCT TAAATACA TGCCAACCTCTAACT C8J_0844 852964 - 853434 + | hypothetical protein C8J_0845 853520 - 853939 + | hypothetical protein TERM 972 854182 - 854142 - g 74 -9.3 -2.82668 | opp_overlap 854150, overlap 854141 854150 854173 CCCTAAATCCCAAAC CCTTACAATCTTTAGATGT TAC AAATCTAAAGATTGTAAAT CTAGGAAATTATAAC C8J_0846 853943 - 854395 + | putative periplasmic protein TERM 973 854945 - 854923 - g 73 -8.6 -3.15197 | opp_overlap 854915 854917 854927, overlap 854926 CAAGAAATTTTAAGA GAACTTAGAA TTT TTCTAAATTC TCAATAATTATACTT C8J_0847 854392 - 854952 + | SCO1/SenC family protein cysM 855858 - 854959 - | cysteine synthase A TERM 974 855978 - 855960 - R 86 -8.9 -4.27694 | TTAATTAAGAAAGAA GGCTAGA ATTTA TCTAGCC GAAGTTTTATTTTTT hupB 856281 - 855985 - | DNA-binding protein HU TERM 975 856363 - 856378 + r 71 -4.8 -4.86216 | AACAGCTTTTTTTAA GTTTTT TTCA AAAAAC TTTATTATTTTTTCT C8J_0850 858215 - 856383 - | invasion antigen B TERM 976 857209 - 857231 + g 76 -6.4 -4.58563 | overlap 857207 CAAATATAAAGTTGA GTTTTTTCTA TAT TAGATAAAAC TTCTTTTTCTAATTC TERM 977 857693 - 857704 + g 81 -5.8 -5.22312 | TTCGCTCACAAATTT CTCC TTCT GGAG TTTTTTGATATAAAT C8J_0851 858277 - 858690 + | thioesterase family protein C8J_0852 858930 - 858730 - | hypothetical protein TERM 978 858898 - 858875 - G 70 -9 -2.56715 | AGTCCCACCAAGGGA TGAAAAAACC TTTC GGCTTTTTCA TAATAATACTTAAAT C8J_0853 859021 - 858908 - | hypothetical protein cstA 861018 - 859141 - | carbon starvation protein A TERM 979 860047 - 860035 - G 78 -4.1 -5.47159 | GGTAATAAATAAAAA TGGAA ACA CTCCA CCTGCAAATACTGGA TERM 980 861181 - 861149 - R 72 -4.3 -4.94902 | opp_overlap 861155, overlap 861150 861155 TAAGTAGCATAAAAA TGAAAAGCTTAAAAA TAA TCTTTAAGCTTTTTT AATCTAAATAAAGAG TERM 981 861180 - 861150 - R 74 -7.8 -3.55857 | opp_overlap 861155, overlap 861149 861155 AAGTAGCATAAAAAT GAAAAGCTTAAAAA TAA TCTTTAAGCTTTTT TAATCTAAATAAAGA TERM 982 861155 - 861175 + r 81 -5.5 -5.22312 | opp_overlap 861155 861150 861149 GCATAAAAATGAAAA GCTTAAAAA TAA TCTTTAAGC TTTTTTAATCTAAAT TERM 983 861175 - 861155 - R 86 -7.7 -4.82678 | opp_overlap 861155, overlap 861150 861149 GCATAAAAATGAAAA GCTTAAAAA TAA TCTTTAAGC TTTTTTAATCTAAAT prsA 862114 - 861185 - | ribose-phosphate pyrophosphokinase TERM 984 862225 - 862190 - R 87 -10.8 -3.5771 | opp_overlap 862198, overlap 862198 AAAAACTGCTGTAAA TTTAAAAAGCTTATAT AAAA ATATAAGCTTTTTTAA GAAATGTAAGCTGTC TERM 985 862217 - 862198 - R 89 -8 -4.81249 | opp_overlap 862198, overlap 862190 CTGTAAATTTAAAAA GCTTATAT AAAA ATATAAGC TTTTTTAAGAAATGT TERM 986 862198 - 862217 + r 95 -8 -5.02476 | opp_overlap 862198 862190 CTGTAAATTTAAAAA GCTTATAT AAAA ATATAAGC TTTTTTAAGAAATGT C8J_0856 862881 - 862222 - | amino acid ABC transporter permease C8J_0857 863644 - 862892 - | amino acid ABC transporter permease pebA 864425 - 863646 - | bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein pebC 865175 - 864447 - | amino acid ABC transporter ATP-binding protein cheR 866099 - 865311 - | putative MCP protein methyltransferase cheB' 866669 - 866115 - | protein-glutamate methylesterase CheB rpiB 866835 - 867272 + | ribose 5-phosphate isomerase B C8J_0863 867272 - 867604 + | hypothetical protein TERM 987 867699 - 867676 - g 71 -2.4 -5.41143 | overlap 867681 GATTTTCCAAAAAAA GGAATTATCT TTAG AGATATTACC ACTCTACTAAATAAC apt 867601 - 868149 + | adenine phosphoribosyltransferase C8J_0865 868168 - 868764 + | DedA family protein pepA 868761 - 870212 + | leucyl aminopeptidase C8J_0867 870209 - 871312 + | translation-associated GTPase TERM 988 871329 - 871306 - T 78 -9.7 -3.12999 | opp_overlap 871305 871303 871306 GCATTTTAGATTCAA TGTTTAGGC AAAATA GCCTAAACA ATATTTATAAATTTT TERM 989 871306 - 871329 + T 75 -9.7 -2.75876 | opp_overlap 871306, overlap 871305 871303 GCATTTTAGATTCAA TGTTTAGGC AAAATA GCCTAAACA ATATTTATAAATTTT argH 872716 - 871334 - | argininosuccinate lyase TERM 990 872232 - 872220 - G 83 -3.4 -5.71295 | opp_overlap 872224, overlap 872224 ATATAAAAAGAAAAA CTCA CAGGC TGAG CGTGTTGTAAATGTG TERM 991 872311 - 872329 + g 72 -7.6 -3.60814 | opp_overlap 872310 TGGTTTGAATCAATT CTTTTAAA AGT TTTAAAAG TTCTATGTGAGATTT pckA 874300 - 872726 - | phosphoenolpyruvate carboxykinase C8J_0870 876112 - 874313 - | oxaloacetate decarboxylase, alpha subunit, putative TERM 992 876175 - 876156 - R 72 -4.4 -5.01497 | opp_overlap 876156 ATTATTATACAAAAA TTTGATAA CACA TTACCAAA ATTATTGCTATAGGC C8J_0871 877485 - 876145 - | sodium transporter, putative TERM 993 876240 - 876267 + g 74 -2.2 -5.5112 | AAATTTTTCTACTTA TAAATTTAGAAA AAAT TTTATAAATTTG TTTTTTATTCATAAA TERM 994 877239 - 877261 + g 72 -7.8 -3.66095 | CGCCATATCGCCATC TATTGCCATA TTT TATGGCAAGA TTTGAATAAGCATTT C8J_0872 878832 - 877498 - | putative transmembrane transport protein atpE 879066 - 879404 + | F0F1 ATP synthase subunit C TERM 995 879416 - 879428 + F 93 -6.2 -5.37043 | opp_overlap 879416 ATAAAACTTATCAAA GCCC TTTTT GGGC TTTTTTCTATGCGGT TERM 996 879658 - 879701 + F 100 -12.9 -3.17571 | AATTTTTCCCTAACT TTTCTCCTAACTTTTTA TTTTTTGTTT TAAAAAGTTAGGAGAAA TTAGCTTAAGGAGTT TERM 997 880262 - 880235 - f 100 -9.8 -5.55769 | opp_overlap 880234 880233 TGCTATAATAAAAAA TCCGCCTTGAGT TTTC ACTCTTGGCGGA AATTTATCAATCAAG TERM 998 880461 - 880450 - f 78 -3 -5.67283 | overlap 880456 AAGTCAAATAAAAAA GAAA TCCG TTTC AAAACGCAGCTCAAT TERM 999 880582 - 880566 - f 70 -3.7 -5.12068 | overlap 880567 GATACTTAATAAAAA GTGTGTA TAA TACATAC TCATAAGGATATTAT C8J_0874 880831 - 881190 + | hypothetical protein TERM 1000 881228 - 881217 - f 93 -3 -6.23545 | GTTAAATAAAAAAAA GAAA TCCG TTTC AAACCACTAAAAAAT C8J_0875 881338 - 881664 + | hypothetical protein TERM 1001 881652 - 881673 + T 91 -11.7 -3.64703 | opp_overlap 881652 881657, overlap 881657 TATTTTATCTTTAAA CAAAAGGCT ATAA AGCCTTTTG TTTAAATAGAAGGAG TERM 1002 881673 - 881652 - T 91 -11.7 -3.57462 | opp_overlap 881652 881657, overlap 881657 TATTTTATCTTTAAA CAAAAGGCT ATAA AGCCTTTTG TTTAAATAGAAGGAG TERM 1003 881668 - 881657 - T 77 -5.8 -4.87803 | opp_overlap 881652 881657, overlap 881652 TATCTTTAAACAAAA GGCT ATAA AGCC TTTTGTTTAAATAGA TERM 1004 881657 - 881668 + T 77 -5.8 -4.90778 | opp_overlap 881657 881652, overlap 881652 TATCTTTAAACAAAA GGCT ATAA AGCC TTTTGTTTAAATAGA C8J_0876 882574 - 881675 - | hypothetical protein TERM 1005 882448 - 882420 - G 74 -6.7 -4.24123 | opp_overlap 882421 882422 882429, overlap 882421 CCAAGAACGCTAAAA CCTGCATGAGCAG AAG CTGCTAATGCAAT TTCCGCCTTTTCTTC TERM 1006 882421 - 882447 + g 72 -8 -3.6834 | opp_overlap 882420 882421, overlap 882422 882429 CAAGAACGCTAAAAC CTGCATGAGCAG AAG CTGCTAATGCAA TTTCCGCCTTTTCTT TERM 1007 882447 - 882421 - G 81 -10.2 -3.13751 | opp_overlap 882421 882422 882429, overlap 882420 CAAGAACGCTAAAAC CTGCATGAGCAG AAG CTGCTAATGCAA TTTCCGCCTTTTCTT TERM 1008 882422 - 882446 + g 85 -11.5 -2.79919 | opp_overlap 882421 882420, overlap 882421 882429 AAGAACGCTAAAACC TGCATGAGCAG AAG CTGCTAATGCA ATTTCCGCCTTTTCT C8J_0877 883322 - 882561 - | hypothetical protein C8J_0878 884371 - 883313 - | hypothetical protein TERM 1009 884489 - 884454 - R 72 -9 -2.51471 | overlap 884453 884488 TATAATTGCATTAAG GGTTTTGCCACAAGGC TGCA ACCCTGTGGCATAATC ACACCCTAGAAAGGG TERM 1010 884509 - 884488 - R 73 -8.7 -3.29043 | overlap 884454 884453 AACCCTGTGGCATAA TCACACCCT AGAA AGGGGGTGA ACTATATGACACGAC TERM 1011 884560 - 884581 + r 70 -8.7 -2.62244 | overlap 884559 884574 ATTTGTATAATTACT GTCAAGGCT TATT AGCCTTGCC CCTTTTCTTAAGGGG C8J_0879 885133 - 884918 - | hypothetical protein TERM 1012 885350 - 885312 - H 77 -4.8 -5.093 | GTGAAAATAAGAAAA GCAATAAGATAAACTT TCAAAAT AAATCTGTCTTATTGC GTGAATATTAAAAAT TERM 1013 885645 - 885618 - H 79 -5.8 -5.00616 | opp_overlap 885606 885637, overlap 885603 GGTTTTTTTAAAAAA CTTAAAAAATAT TAAG ATTTTTTTTAAG TATAAAGAATATAAT TERM 1014 885911 - 885926 + G 76 -2.6 -5.6473 | gap 1 TTATTGGATTGTTTA GCTG-TA TAC TAGCAGC TTTTTTTGCTATTCT TERM 1015 886290 - 886305 + G 71 -7.6 -3.48208 | overlap 886289 886297 TTTATTTGGTGCCTC TGCAAC CCCT GTTGCA CTTTTTGCTATAGGT TERM 1016 886381 - 886397 + G 72 -8.1 -3.37944 | ATAGTTGTCATCTTT GCTAAAA TGA TTTTAGC TCCTTTATTTTTTGT C8J_0880 885703 - 886614 + | putative integral membrane protein aas 890134 - 886622 - | 2-acyl-glycerophospho-ethanolamine acyltransferase TERM 1017 887793 - 887805 + g 77 -4.9 -5.2696 | opp_overlap 887791 ACTGCTAACATCATG CTAAA AAT TTTAG TTTTTTGCATTTTAA C8J_0882 890559 - 890179 - | hypothetical protein TERM 1018 890318 - 890334 + g 82 -5.1 -5.37345 | AATTCTGCAACCTTA CTAGCAA ATT TTGCAAG TTTTTTATCATTACA glnP 892144 - 891359 - | amino acid ABC transporter permease C8J_0884 893372 - 892167 - | permease, putative TERM 1019 892448 - 892480 + g 82 -10.7 -2.64144 | opp_overlap 892415, overlap 892422 892447 892450 AACTCTTTTTTACCT CATTTTTGCTTGCAC CTA GGGCAAGTAAAAGTG CTATTTCACTGCGAC TERM 1020 892652 - 892666 + g 72 -4.4 -5.03715 | CAGCATAATCATCTT TTAAAT AAG ATTTAA TTTTTTCAACATCCT secA 895957 - 893369 - | preprotein translocase subunit SecA TERM 1021 895359 - 895375 + g 71 -6.7 -3.97088 | overlap 895352 895370 TGCTCTCTTTGAACT TTTTCAA CTT TTGAAAA TTTCATATTATCACG lolA 896058 - 896567 + | outer-membrane lipoprotein carrier protein C8J_0887 897298 - 896564 - | hypothetical protein TERM 1022 897295 - 897315 + g 73 -5.6 -4.58859 | TTAAAAATATTTTTT TCATTTAA TGCCT TTAAATGA TTTGTTCTTGTATTT C8J_0888 898651 - 897308 - | hypothetical protein TERM 1023 898485 - 898466 - G 87 -3.5 -5.95539 | TCCTAAACAAAAAAA GCTGTGT AAGGTA ACACCGC CTATATTAAACGCCG TERM 1024 899480 - 899461 - g 84 -6.6 -5.23765 | overlap 899455 CAAAGAAGATAAAAA CTATTTTT ATGG AAAAATAG GCTCTAAAAAATATA TERM 1025 899753 - 899741 - g 81 -2.7 -5.77853 | AATTCTCAAAAAAAA GATTT TTT AAACC GCTTTGGGAAAGCTT C8J_0889 898700 - 900046 + | putative lipoprotein TERM 1026 900074 - 900044 - T 100 -10 -4.87008 | opp_overlap 900047, overlap 900047 AATATACAAAACAAA TAAGATTTATTGAT TTA ATCAATAAATCTTT TAGTTAAATCTGCAA TERM 1027 900047 - 900071 + T 100 -11.7 -4.44548 | opp_overlap 900047 900044 ATACAAAACAAATAA GATTTATTGAT TTA ATCAATAAATC TTTTAGTTAAATCTG TERM 1028 900071 - 900047 - T 100 -11.7 -4.49673 | opp_overlap 900047, overlap 900044 ATACAAAACAAATAA GATTTATTGAT TTA ATCAATAAATC TTTTAGTTAAATCTG C8J_0890 900930 - 900058 - | carbon-nitrogen family hydrolase TERM 1029 900571 - 900559 - G 70 -3.5 -5.14626 | AGGAGTAAAATAAAA TTTTT CAT AAAAA CAAGGATCATCAGGT C8J_0891 901814 - 900927 - | cation efflux family protein TERM 1030 901208 - 901237 + g 88 -9.5 -4.07568 | opp_overlap 901225, overlap 901209 901211 TAGGTAAAGCCTCAT CCATTAAAAAAGC CAAA GCTTTTTTAATGA TTTTAAAAGCAGAAA TERM 1031 901209 - 901236 + g 100 -13 -3.04398 | opp_overlap 901225, overlap 901208 901211 AGGTAAAGCCTCATC CATTAAAAAAGC CAAA GCTTTTTTAATG ATTTTAAAAGCAGAA TERM 1032 901211 - 901234 + g 78 -9.8 -3.08032 | opp_overlap 901225, overlap 901209 901208 GTAAAGCCTCATCCA TTAAAAAAGC CAAA GCTTTTTTAA TGATTTTAAAAGCAG TERM 1033 901783 - 901796 + g 80 -2.3 -5.75945 | ATAGCACATAAACTT GCTAC AAAA GTTGC TTTTTTTTGCAAACT C8J_0892 902788 - 901811 - | peptidyl-arginine deiminase family protein TERM 1034 901936 - 901946 + g 72 -4 -5.01535 | AAAGTCTTTTAGCTA TGAT TTC ATCA TTTTTATCCTTGTAA TERM 1035 902860 - 902877 + r 91 -11.3 -3.69934 | opp_overlap 902853 AAATTTAAGAAGTTT GCCTCGA TATT TCGAGGC TTTAGGGTATTATTT C8J_0893 903321 - 902887 - | putative lipoprotein C8J_0894 904923 - 903331 - | hypothetical protein TERM 1036 904929 - 904955 + r 76 -8.2 -3.6581 | opp_overlap 904928 904940, overlap 904926 TTTTAAACATCATAG TTTCCTAAAAAT AAA ATTTTTCGGAAA TATTTTACACATAAT purH 906554 - 905022 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1037 905932 - 905942 + g 70 -4 -4.93898 | overlap 905929 TTTTCTCCATATTTT GTAT CAA ATAC TTTTTGTCCTACTAT C8J_0896 907327 - 906557 - | DnaJ domain protein TERM 1038 906664 - 906676 + g 76 -2.7 -5.54894 | TGTTTGCATTTAAAA TATCA GGA TGGTA TTTTTTTGCTAAATT purL 909510 - 907324 - | phosphoribosylformylglycinamidine synthase II trmE 910849 - 909521 - | tRNA modification GTPase TrmE TERM 1039 909669 - 909634 - G 75 -4.8 -5.0925 | opp_overlap 909634, overlap 909627 909636 GTTCAAAAGCAAAAA GTTCTAAAGAACTTTC CTCT AAAAGTCCTTTAGCTC TAAAAATCGCTTCAC C8J_0899 911660 - 910842 - | hypothetical protein TERM 1040 911077 - 911064 - G 70 -5.3 -4.58395 | TTGATTTTCTAAAAA TTGAG CGAT CTCAA GGCGTACTAAAAGAT TERM 1041 911479 - 911497 + g 95 -6.1 -6.02546 | GCAAATTCTTTTTTA GGATTTT TTTTC AAAATCC TTTTTTTTGCTTTAG TERM 1042 911665 - 911677 + r 72 -3.3 -5.36965 | TCGATTTTCATTTTT CATGC TCC GCTTG TTTTTTGTGATGTTC C8J_0900 913249 - 911657 - | putative inner membrane protein translocase component YidC TERM 1043 912726 - 912752 + g 70 -6 -4.22948 | opp_overlap 912726 GGATAAAAAGTAATA TCTTTTTCGATT TTC AATCCAGAAAGA TTTTGAGTGAGTTTT TERM 1044 912816 - 912801 - G 70 -6.2 -4.19587 | overlap 912799 TCATCAACAAAAAGA TTGCTA GCGT TAGCAA CATAAGGAATTTTAA TERM 1045 912969 - 912957 - G 75 -4.1 -5.27335 | TCTTTTAAATAAAAA GCAGA AAT TCTAC CAAAAGAGTCAATTT C8J_0901 913617 - 913246 - | hypothetical protein rnpA 913910 - 913584 - | ribonuclease P protein component TERM 1046 913778 - 913792 + gr 93 -4.3 -6.15828 | TTCCAACTTTTTTAC TAGCA ACAAC TGCTA TTTTTTTTTCATAAC C8J_0903 914041 - 913907 - | 50S ribosomal protein L34 C8J_0904 914172 - 914651 + | GNAT family acetyltransferase C8J_0905 914648 - 915256 + | hypothetical protein TERM 1047 915273 - 915263 - g 76 -2.6 -5.52384 | opp_overlap 915263 915257 915254 TTTTTATGAAAAAAA TATT TCT AATA TTTTTCTTATCTTGC C8J_0906 915253 - 916443 + | hypothetical protein TERM 1048 916423 - 916455 + T 74 -7.9 -3.65214 | opp_overlap 916420 916424 916425, overlap 916424 916424 CAAGGCAAACAAGCA AGCTTTGAAGAATTA AAA TAATTCTTCAAAGAG CTTTTTTAACTGCAT TERM 1049 916424 - 916456 + T 81 -5.2 -5.09895 | gap 2, opp_overlap 916420 916424 916425, overlap 916423 916424 AAGGCAAACAAGCAA GCT-TT-GAAGAATTA AAA TAATTCTTCAAAGAGC TTTTTTAACTGCATA TERM 1050 916424 - 916454 + T 84 -11.4 -2.78405 | opp_overlap 916420 916424 916425, overlap 916423 916424 AAGGCAAACAAGCAA GCTTTGAAGAATTA AAA TAATTCTTCAAAGA GCTTTTTTAACTGCA TERM 1051 916454 - 916424 - T 89 -11.4 -3.63326 | opp_overlap 916424 916423 916424, overlap 916420 916425 AAGGCAAACAAGCAA GCTTTGAAGAATTA AAA TAATTCTTCAAAGA GCTTTTTTAACTGCA TERM 1052 916453 - 916425 - T 100 -14.9 -2.76911 | opp_overlap 916424 916423 916424, overlap 916424 916420 AGGCAAACAAGCAAG CTTTGAAGAATTA AAA TAATTCTTCAAAG AGCTTTTTTAACTGC C8J_0907 916809 - 916435 - | thioesterase family protein TERM 1053 918025 - 918013 - g 77 -4.9 -5.22104 | TAAAAAACAATAAAA TCTTT ATC AAAGA TGCTAATATGATTAT TERM 1054 918985 - 918973 - g 71 -4.9 -4.78237 | opp_overlap 918973 918977, overlap 918977 CAGCTTATAATAAAA TCATT ATC AATGA TACTTTATTTGGTGT C8J_0908 917460 - 919328 + | hypothetical protein C8J_0909 919419 - 919730 + | hypothetical protein TERM 1055 919758 - 919732 - f 77 -5.2 -4.91778 | opp_overlap 919733 919735 919753 919756, overlap 919733 919735 919748 919750 919753 919756 CAAAGATAAAATAAA TCATTCCTATCT TAA AGATAGGAATCT TTTGCTTGTATTTTT TERM 1056 919757 - 919733 - f 77 -8.7 -3.52627 | opp_overlap 919733 919735 919753 919756, overlap 919732 919735 919748 919750 919753 919756 AAAGATAAAATAAAT CATTCCTATCT TAA AGATAGGAATC TTTTGCTTGTATTTT TERM 1057 919733 - 919757 + F 90 -8.7 -4.6008 | opp_overlap 919733 919732 919735 919748 919750 919753 919756, overlap 919735 919753 919756 AAAGATAAAATAAAT CATTCCTATCT TAA AGATAGGAATC TTTTGCTTGTATTTT TERM 1058 919735 - 919755 + F 95 -11.3 -3.87807 | opp_overlap 919733 919732 919735 919748 919750 919753, overlap 919733 919753 AGATAAAATAAATCA TTCCTATCT TAA AGATAGGAA TCTTTTGCTTGTATT TERM 1059 919755 - 919735 - f 87 -11.3 -3.29782 | opp_overlap 919735 919733 919753, overlap 919733 919732 919748 919750 919753 AGATAAAATAAATCA TTCCTATCT TAA AGATAGGAA TCTTTTGCTTGTATT TERM 1060 919797 - 919750 - f 87 -11 -3.38046 | opp_overlap 919735 919733 919753 919756 919795, overlap 919735 919733 919732 919748 919753 919756 919790 TTCCTATCTTAAAGA TAGGAATCTTTTGCTTGTATTT TTAT AAATATAAACAAAAGATTCTTA AATCTTAATCTTACA TERM 1061 919794 - 919753 - f 95 -12.7 -2.55297 | opp_overlap 919735 919733 919753 919756, overlap 919735 919733 919732 919750 919748 919756 919790 CTATCTTAAAGATAG GAATCTTTTGCTTGTATTT TTAT AAATATAAACAAAAGATTC TTAAATCTTAATCTT TERM 1062 919753 - 919794 + F 100 -12.7 -3.21464 | opp_overlap 919735 919733 919732 919750 919748 919753 919756 919790, overlap 919735 919733 919756 CTATCTTAAAGATAG GAATCTTTTGCTTGTATTT TTAT AAATATAAACAAAAGATTC TTAAATCTTAATCTT TERM 1063 919756 - 919791 + F 79 -8.6 -3.73872 | opp_overlap 919733 919732 919753 919750 919748 919756 919790, overlap 919733 919753 TCTTAAAGATAGGAA TCTTTTGCTTGTATTT TTAT AAATATAAACAAAAGA TTCTTAAATCTTAAT TERM 1064 919791 - 919756 - f 75 -8.6 -3.42257 | opp_overlap 919733 919756 919753, overlap 919733 919732 919753 919750 919748 919790 TCTTAAAGATAGGAA TCTTTTGCTTGTATTT TTAT AAATATAAACAAAAGA TTCTTAAATCTTAAT C8J_0910 919827 - 921530 + | hypothetical protein TERM 1065 921535 - 921563 + F 82 -9.7 -3.65581 | opp_overlap 921537, overlap 921537 921544 GCTCAAGATGATTAA AATCCAAAAGGTT AAA AGCCTTTTGGATC TTGTTAAAAATTAAT TERM 1066 921561 - 921537 - f 91 -10.1 -4.35461 | opp_overlap 921537 921535 921544 TCAAGATGATTAAAA TCCAAAAGGTT AAA AGCCTTTTGGA TCTTGTTAAAAATTA TERM 1067 921537 - 921561 + F 91 -12.3 -3.40498 | opp_overlap 921537, overlap 921535 921544 TCAAGATGATTAAAA TCCAAAAGGTT AAA AGCCTTTTGGA TCTTGTTAAAAATTA TERM 1068 921604 - 921592 - f 73 -3.5 -5.28281 | overlap 921598 ATAAAACAAACAAAA TTTAA AGA TTAAA AATCAAAAAAGATTG TERM 1069 921629 - 921615 - f 100 -7.2 -5.54079 | TTAAAAATCAAAAAA GATTGA TAA TCAATC AAACAAATACAAAAA TERM 1070 922239 - 922229 - g 75 -4 -5.33785 | AACGATTACAAAAAA GAAA GTA TTTC AGTTCAAGACTTACA TERM 1071 922360 - 922370 + G 74 -6.8 -4.20531 | opp_overlap 922359 922360 AATTCAAATCAATAT CACC TTA GGTG TTTTAGGTAAATATG C8J_0911 921770 - 923584 + | putative outer-membrane protein C8J_0912 923639 - 924238 + | hypothetical protein C8J_0913 924248 - 924508 + | hypothetical protein C8J_0914 924505 - 924852 + | hypothetical protein TERM 1072 924923 - 924893 - f 83 -8.5 -4.19238 | TTGCTAATTCTAAAA GCTTTTAATGTTA TAATT TAGCATTAAAAGC AAATGTCAAGGATAA C8J_0915 924941 - 925816 + | methyltransferase, putative C8J_0916 925888 - 926466 + | hypothetical protein C8J_0917 926640 - 926467 - | putative lipoprotein C8J_0918 927176 - 926649 - | thermonuclease family protein TERM 1073 927496 - 927480 - g 72 -5.1 -4.71828 | overlap 927493 AGTTTATGAAGAAAA TGGCTTT TTA AGAGCCA AAAATTCAAGTCTTG pepD 927244 - 928512 + | aminoacyl-histidine dipeptidase C8J_0920 929742 - 928495 - | transmembrane transport protein TERM 1074 928558 - 928539 - G 81 -7.2 -4.56597 | TGCTTCTTGCAAAAA CGCGTTTT AACA AAAACACG CAAAATAAGGAGCAA TERM 1075 929048 - 929060 + g 76 -6.3 -4.62471 | AAACAAACAAGCATG CTCAT TTT ATGAG TTTTTAAAGCTTCAA TERM 1076 929194 - 929176 - G 75 -4.6 -5.15117 | TAAAATTCCAAAAAA TCCTCCTA TGA TAAAAGGA ATTCTCCAAGCATAG TERM 1077 929778 - 929766 - R 72 -6.2 -4.31 | opp_overlap 929766 929762 CTAAATCAATATAAA GGGC AAAAA GCCC TTTGTTAAATTTTTC TERM 1078 929766 - 929778 + r 72 -6.2 -4.35017 | opp_overlap 929766, overlap 929762 CTAAATCAATATAAA GGGC AAAAA GCCC TTTGTTAAATTTTTC C8J_0921 930622 - 929783 - | surface antigen, CjaA TERM 1079 930129 - 930143 + g 72 -8.6 -2.94993 | ATATCAGGATAATTT TGCGTA AAA TACGCA TCTGCTGTTGTGCCT C8J_0922 930841 - 931959 + | surface-exposed lipoprotein TERM 1080 932021 - 931987 - f 77 -6 -4.7657 | gap 1, opp_overlap 931987 TAAAAACTTCAAAAA CATTAAAAGCAA-GA TTAAAT TCTTTGCTCTTAATG TTTCATAACATTAAC C8J_0923 932050 - 932790 + | hypothetical protein hipO 933945 - 932794 - | hippurate hydrolase TERM 1081 933667 - 933685 + g 71 -6.8 -4.02856 | CATTACATTTTCTTT TTTGCTTT TAT AAGGCAAA TTTGTGCATTCTTGT C8J_0925 935167 - 933947 - | hypothetical protein TERM 1082 934064 - 934036 - G 100 -9.7 -4.59653 | opp_overlap 934041, overlap 934041 934053 AAGCAAAAATATAAA CAAAACCCAAAGT AAA ACTATGGGTTTTA TCAACACTCCAAGAT TERM 1083 934041 - 934059 + g 79 -7.4 -4.37886 | opp_overlap 934036 934041 934053 AAAATATAAACAAAA CCCAAAGT AAA ACTATGGG TTTTATCAACACTCC TERM 1084 934059 - 934041 - G 86 -7.4 -5.15682 | opp_overlap 934041, overlap 934036 934053 AAAATATAAACAAAA CCCAAAGT AAA ACTATGGG TTTTATCAACACTCC TERM 1085 935226 - 935213 - H 78 -2.5 -5.84432 | opp_overlap 935213 TATAACATAAAAAAA TAATA TATT TATTA TCTTTAATTATTTTT TERM 1086 935243 - 935253 + H 78 -2.6 -5.82281 | CTTTAATTATTTTTT TAAT TTA ATTA TTTTTTTATATATTT C8J_0926 935402 - 935608 + | hypothetical protein C8J_0927 936366 - 935611 - | hypothetical protein C8J_0928 937634 - 936369 - | iron-sulfur cluster-binding domain-containing protein TERM 1087 936993 - 936978 - G 76 -5.4 -5.03715 | ATCACCCGTAAAAAA TTGCGG CGCT CCACAA CACACTTGTTCTTTC hemN 938991 - 937636 - | coproporphyrinogen III oxidase C8J_0930 939469 - 938978 - | hypothetical protein argF 940386 - 939466 - | ornithine carbamoyltransferase hemB 941366 - 940383 - | delta-aminolevulinic acid dehydratase TERM 1088 941788 - 941762 - g 75 -7.4 -4.11623 | overlap 941752 TACGATTAAAGCAAA TCATCAGCTT GGCTTTA AAGCCGATGA GAGAACTTATGAAAT ribA 941424 - 941984 + | GTP cyclohydrolase II gidB 941985 - 942551 + | methyltransferase GidB TERM 1089 942563 - 942548 - T 79 -9 -3.60805 | opp_overlap 942548 ATATTGTATTTTAAA GTAGCC CTAA GGCTAC TTTTTATTCTGCTAA TERM 1090 942548 - 942563 + T 100 -9 -5.22006 | opp_overlap 942548 ATATTGTATTTTAAA GTAGCC CTAA GGCTAC TTTTTATTCTGCTAA C8J_0935 943139 - 942567 - | hypothetical protein C8J_0936 944326 - 943229 - | putative integral membrane protein TERM 1091 944401 - 944411 + H 81 -2.6 -6.11243 | opp_overlap 944390, overlap 944390 TATATTATTTTAATT TTTA TAA TAAA TTTTTTTTATTAAAT TERM 1092 945200 - 945187 - g 70 -3.9 -5.07941 | AAAAGCATAGAAAAA GAATT AAAA AATTC AACACTTTATGAAAT C8J_0937 944440 - 945321 + | LysR family transcriptional regulator rpoD 945401 - 947269 + | RNA polymerase sigma factor RpoD C8J_0939 947796 - 947284 - | phosphohistidine phosphatase SixA C8J_0940 948311 - 947793 - | rhomboid family protein TERM 1093 948052 - 948041 - G 78 -4.4 -5.46276 | AATACACATAAAAAA CACT TAAA AGTG AACACAACAATCCGC C8J_0941 948409 - 948825 + | putative periplasmic protein C8J_0942 950449 - 948833 - | putative membrane bound ATPase TERM 1094 950189 - 950177 - G 86 -3.3 -5.85244 | opp_overlap 950177 AAGTAAAATAAAAAA CACCC AAA GCGTG TTATCTTTTTTAACC C8J_0943 951703 - 950453 - | MiaB-like tRNA modifying protein TERM 1095 950613 - 950627 + g 93 -4.3 -6.24157 | TTTTCCACCAAAACT TCAAG CGGAA CTTGA TTTTTTTTTCTAAAT TERM 1096 950923 - 950943 + g 93 -8.3 -5.20154 | overlap 950916 950925 TATCCGTATGCGATC TTCTTCGCA TTA TGCGAAGCA TTTTTTCACTTGTAT TERM 1097 950925 - 950941 + g 82 -10.9 -2.81195 | overlap 950916 950923 TCCGTATGCGATCTT CTTCGCA TTA TGCGAAG CATTTTTTCACTTGT TERM 1098 951678 - 951691 + g 73 -3.9 -5.31519 | opp_overlap 951678 GTGCGACACCCAAAG GTTTT AAAA AAAAC TTTTTCTTTCAATCT TERM 1099 951717 - 951738 + r 72 -8.9 -2.63549 | overlap 951715 951716 951719 AATCTTTATTCCTTG CATGAAAAT GCAT ATTTTCATG ATGTTGTTCAAAATG C8J_0944 953271 - 951700 - | mechanosensitive ion channel family protein TERM 1100 952483 - 952470 - G 72 -2.5 -5.4593 | opp_overlap 952475 952481, overlap 952475 GCAAAATAAGAAAAA TAATA TTTA TATTA ATAAAATTAATAATC TERM 1101 952590 - 952565 - G 73 -5.5 -4.6821 | AATTTCAACATAAAA GCTATAGCTAT AACA ATAACAATAGC AACAAGTATATTTAC TERM 1102 952736 - 952752 + g 76 -9.5 -3.17325 | overlap 952739 TCCAACTTTTTATCC GAAGCTT TTA AAGCTTC TATATTCTCAACACT aroB 954323 - 953268 - | 3-dehydroquinate synthase C8J_0946 955769 - 954369 - | trkA domain protein TERM 1103 955732 - 955708 - G 91 -10.1 -4.08064 | opp_overlap 955712, overlap 955695 955712 AAGCCTTTTTCAAAA CAAAGCCTTTC TAA GAAATGCTTTG CTAAAATACCGTCTA TERM 1104 955728 - 955712 - G 70 -5.1 -4.64861 | opp_overlap 955712, overlap 955695 955708 CTTTTTCAAAACAAA GCCTTTC TAA GAAATGC TTTGCTAAAATACCG tgt 955799 - 956920 + | queuine tRNA-ribosyltransferase TERM 1105 957081 - 957069 - g 70 -6.3 -4.11869 | opp_overlap 957068 GAAAAAATTTATAAA CTTCA AGA TGAAG AATTTAAGCTTTCTA C8J_0948 956922 - 957689 + | hypothetical protein TERM 1106 957709 - 957682 - T 100 -9.4 -5.08015 | opp_overlap 957687 957690, overlap 957687 AAGCTAAAAAACAAA CAAAATAAGCAA AATT TTGCTTATTTTA AGAATATTTATATAT TERM 1107 957687 - 957704 + T 73 -7.1 -4.15543 | opp_overlap 957687 957682, overlap 957690 AAAAAACAAACAAAA TAAGCAA AATT TTGCTTA TTTTAAGAATATTTA TERM 1108 957704 - 957687 - T 95 -7.1 -5.3472 | opp_overlap 957687 957690, overlap 957682 AAAAAACAAACAAAA TAAGCAA AATT TTGCTTA TTTTAAGAATATTTA C8J_0949 958285 - 957821 - | hypothetical protein TERM 1109 957969 - 957986 + g 76 -2.7 -5.5604 | opp_overlap 957969, overlap 957962 TTTGCAGCCAAAGCA GAAACAA ATTC TAGTTTC TTTTTTGTTGCTTCA TERM 1110 958257 - 958243 - G 72 -4.2 -5.16681 | CTAAAAACAATAAAA GCGCTA AAG CAGCAC AAAAAATAACCAAAA C8J_0950 961531 - 958286 - | cytochrome c biogenesis protein, CcmF/CycK/CcsA family livF 962244 - 961549 - | high affinity branched-chain amino acid ABC transporter, ATP-binding protein TERM 1111 961770 - 961749 - G 78 -9.5 -3.37071 | overlap 961761 AAACTTCACCCACAA TCTTTGGAG CAAG CCCCAAAGA AGGCTCATCCAACAT livG 963001 - 962231 - | high affinity branched-chain amino acid ABC transporter, ATP-binding protein TERM 1112 962737 - 962712 - G 83 -9.9 -3.61015 | overlap 962710 AAACCAATAAGAACA TTTTCAAGCAC ATTC ATGCTTGAAAA AAGCCTAATATTTTG livM 964047 - 962998 - | high affinity branched-chain amino acid ABC transporter, permease protein TERM 1113 964013 - 963999 - G 81 -3.6 -5.56372 | AAACGAAAATAAAAA CAATTG AAG CAATTA AAAAGATTAAATGTG livH 964946 - 964050 - | high affinity branched-chain amino acid ABC transporter, permease protein C8J_0955 966074 - 964965 - | high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein livJ 967211 - 966096 - | branched-chain amino acid transport system substrate-binding protein C8J_0957 967676 - 967242 - | cytochrome c family protein TERM 1114 967280 - 967298 + g 71 -6 -4.41494 | overlap 967282 TTGTTTTTTGCGCAG GTTCTTCT TCA AGAAGATC TTTTACTTGCAAATC TERM 1115 967282 - 967296 + g 71 -7.2 -3.8125 | overlap 967280 GTTTTTTGCGCAGGT TCTTCT TCA AGAAGA TCTTTTACTTGCAAA C8J_0958 967876 - 967685 - | porin domain protein TERM 1116 967851 - 967839 - G 77 -4.9 -5.26119 | GCTGCAAAAACAAAA TGATT TAA AATCA TACCAATTAAAAATA C8J_0959 968434 - 967928 - | hypothetical protein asd 969474 - 968443 - | aspartate-semialdehyde dehydrogenase C8J_0961 970775 - 969474 - | sigma-54 dependent DNA-binding response regulator C8J_0962 971149 - 970832 - | hypothetical protein C8J_0963 971772 - 971257 - | putative lipoprotein gyrA 974427 - 971836 - | DNA gyrase subunit A C8J_0965 974896 - 974468 - | transformation system protein TERM 1117 975027 - 975010 - R 75 -9.1 -3.14989 | opp_overlap 975009, overlap 975005 975008 ATTCACAAAAGCAGA GCAGAGC AAAA GCTCCGC AATTTATACACCTCA mapA 975684 - 975040 - | putative lipoprotein TERM 1118 975729 - 975713 - R 73 -6.7 -4.18697 | AAAATTATTTTAAAA TTGTATT AAA AATACAA GCAAATTTCAAGCCA lepA 977557 - 975761 - | GTP-binding protein LepA TERM 1119 975847 - 975860 + g 74 -5.3 -4.98911 | TTTTACCTTCTTTTT GCTTT TCTA AAAGC TTTCTTTTTCTAGTA C8J_0968 977684 - 978958 + | putative outer membrane component of efflux system C8J_0969 978955 - 979695 + | hypothetical protein C8J_0970 979698 - 982715 + | AcrB/AcrD/AcrF family protein TERM 1120 982707 - 982733 + T 100 -6.8 -5.85178 | opp_overlap 982707 TATGAGAGAGAAAAA TTAAATTAACCA AAA TGATTAATTTAA TTTTTTTTAAGTATT TERM 1121 982733 - 982707 - T 100 -9 -5.05601 | opp_overlap 982707 TATGAGAGAGAAAAA TTAAATTAACCA AAA TGATTAATTTAA TTTTTTTTAAGTATT C8J_0971 983546 - 982740 - | adenylosuccinate lyase TERM 1122 983140 - 983160 + g 70 -8.5 -3.05536 | AGAATATTTGTCATT TCATTATAT TCT ATATAATGA TCTTGAAAATAATTT TERM 1123 983437 - 983419 - G 95 -7.6 -5.40072 | opp_overlap 983404 983418 TTTTCTTCAAAAAAA GAAAAAAT TTT ATTTTTTC GTCCTATGACCTTTG C8J_0972 984266 - 983547 - | arginyl-tRNA-protein transferase C8J_0973 984517 - 984266 - | hypothetical protein pycA 985966 - 984521 - | acetyl-CoA carboxylase C8J_0975 986106 - 987269 + | cell division protein, FtsW/RodA/SpoVE family TERM 1124 987574 - 987586 + G 72 -7.7 -3.68071 | opp_overlap 987573, overlap 987573 987581 987582 TGTAGGTGGATATAG TGCAG CTC CTGCA TCTTTTGCAGCTTTA murG 987266 - 988294 + | N-acetylglucosaminyl transferase C8J_0977 989428 - 988265 - | putative transmembrane transport protein C8J_0978 990287 - 989436 - | hypothetical protein C8J_0979 991240 - 990350 - | putative transcriptional regulatory protein C8J_0980 991842 - 991237 - | transferase TERM 1125 991807 - 991826 + g 81 -3.6 -5.60993 | gap 1, overlap 991809 991811 TATTTCTACACATTT TCTATCGCT TAT GGCGAT-GA TTTTTTTATCCCACA thiH 992977 - 991832 - | thiamine biosynthesis protein ThiH TERM 1126 992799 - 992825 + g 72 -8.8 -3.01537 | ATGAAATCTTCTGCT GCACTTGAAAGC AAA GCTTTTAAATGC TCTATGCTTAAATGT thiG 993756 - 992980 - | thiazole synthase moeB 994559 - 993759 - | thiamine biosynthesis protein ThiF thiS 994750 - 994559 - | thiamine biosynthesis protein ThiS C8J_0985 996192 - 994747 - | hypothetical protein C8J_0986 996821 - 996318 - | hypothetical protein TERM 1127 996494 - 996475 - G 73 -5.8 -4.65512 | overlap 996464 996492 AAAATAACTATAAAA TTATGGTT ATAT AACCACAA ATAAAAACGGATTGC TERM 1128 996512 - 996502 - G 81 -4.6 -5.4182 | opp_overlap 996498, overlap 996492 AACCACAAATAAAAA CGGA TTG CCCG TTTCTCTTTATAATA C8J_0987 997537 - 996821 - | RlfA TERM 1129 996925 - 996935 + g 81 -2.6 -5.67283 | overlap 996922 ATGTTTCAATTTTAT TTAT AAT ATAA TTTTTTATTTCGCTT TERM 1130 997318 - 997304 - G 85 -2.9 -5.9218 | TACAGAAGAAAAAAA GAATT CTAAT AATTC ATCATAAAAACCTTT C8J_0988 999614 - 997551 - | hypothetical protein TERM 1131 998824 - 998843 + g 72 -2.9 -5.41787 | overlap 998825 ACACCTTCCCATTTT TTCTTTG CTTTAT CAAAGAG TTTTTCTATTTTTTG TERM 1132 999145 - 999164 + g 73 -5.8 -4.58424 | opp_overlap 999134 999145, overlap 999134 999140 GGAATATTTGGAATA GATTCAAA ATAA TTTGGATC TTTTCTATGATAATA dapE 1000721 - 999624 - | succinyl-diaminopimelate desuccinylase C8J_0990 1001325 - 1000726 - | transporter, LysE family C8J_0991 1002019 - 1001318 - | NAD-dependent deacetylase C8J_0992 1005634 - 1002062 - | hypothetical protein TERM 1133 1002863 - 1002881 + gr 74 -8.2 -3.60214 | ATTTATATTTTGTTG CGAAGTTG TAA TAACTTCG TTATATAATTGAAAT C8J_0993 1005902 - 1005609 - | hypothetical protein mutS 1008118 - 1005911 - | recombination and DNA strand exchange inhibitor protein TERM 1134 1006982 - 1006968 - G 70 -5.8 -4.22524 | ATACCTAAAAGCAAA TTTTTC TTA GAAAAA AGTCTAGAAAAATGC C8J_0995 1008461 - 1008111 - | hypothetical protein TERM 1135 1008361 - 1008376 + g 74 -3.3 -5.41746 | opp_overlap 1008361 1008362 ATCACAAGCAAAACA CCAAA AAAAGG TTTGG TTTTTTTGCCCAATT murC 1009749 - 1008454 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1136 1009500 - 1009488 - G 71 -7.7 -3.53012 | opp_overlap 1009488 CTTCCTTGCGTGAAA GGCAT TTA ATGCC TAATTCTTTAGCATG C8J_0997 1010655 - 1009873 - | carbon-nitrogen family hydrolase C8J_0998 1010821 - 1010648 - | hypothetical protein guaB 1012275 - 1010818 - | inositol-5-monophosphate dehydrogenase gatA 1013646 - 1012285 - | aspartyl/glutamyl-tRNA amidotransferase subunit A C8J_1001 1013753 - 1013643 - | hypothetical protein ileS 1016500 - 1013747 - | isoleucyl-tRNA synthetase TERM 1137 1016356 - 1016369 + g 83 -6.7 -5.10516 | AGGTAAAACTTTTTT TCGCA TTTT TGCGA TTTTCTTTCATTTTT TERM 1138 1016812 - 1016831 + G 81 -9.4 -3.69323 | TTGCATTATGCGACT GTTGCTAA AATT TTAGCAAC TTTAAATGATGATAA C8J_1003 1016599 - 1017687 + | competence/damage-inducible domain protein TERM 1139 1017689 - 1017667 - f 76 -6.4 -4.67038 | opp_overlap 1017666 CTTTTAAAATTAAAA CCTGAAATTT TTG AAATTTAAGG GATTTAAAAATGAAA TERM 1140 1017751 - 1017736 - g 75 -4.8 -5.04987 | AAGACTTGGAAAAAA TTTATC CCTT GATAAA ACAATTAAGAAATAA TERM 1141 1017771 - 1017781 + G 70 -4 -5.00884 | opp_overlap 1017771 1017780 TTAAGAAATAACCTA TCTT TGA AAGA TTTTTTAGACAAAAT C8J_1004 1017699 - 1018013 + | hypothetical protein C8J_1005 1018189 - 1018647 + | hypothetical protein C8J_1006 1018644 - 1018808 + | hypothetical protein TERM 1142 1019048 - 1019058 + G 75 -4 -5.23016 | TTAATTATAATCATT TCAA GAC TTGA TTTTTTGGATTATTT rdxA 1018808 - 1019413 + | nitroreductase family protein TERM 1143 1019442 - 1019405 - f 100 -16.1 -4.15106 | opp_overlap 1019399 1019415 GATGAAGTTGTAAAA TTTATTTAAATTTTGCT TTTA AGCAAAATTTAAATAAA AATAAACTGATTCTT TERM 1144 1019578 - 1019591 + G 88 -3.1 -6.15536 | TTTTTAGAATGGTTT TAGCG CCTT TGCTA TTTTTTTTGTTAATT pgsA 1019538 - 1020074 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase C8J_1009 1020071 - 1021177 + | hypothetical protein TERM 1145 1021596 - 1021578 - g 71 -3.2 -5.2696 | TTAAAATTTAAAAAA TACACTAT TTC ACAATGTA ATTTTTGCTTTACTT C8J_1010 1021170 - 1022036 + | hypothetical protein rpsF 1022123 - 1022500 + | 30S ribosomal protein S6 TERM 1146 1022830 - 1022810 - g 74 -8.3 -3.69618 | overlap 1022808 TTCAAGTTGAAAATA TGGAAATGC TTG GCAATTCCA ATGCTCCACAACAAG ssb 1022509 - 1023060 + | single-strand DNA-binding protein TERM 1147 1023238 - 1023224 - g 75 -4.3 -5.32944 | GGTACAAGCAAAAAA TACCA AGAAA TGGTA GAAGTTGCAATCAAA rpsR 1023071 - 1023331 + | 30S ribosomal protein S18 TERM 1148 1023362 - 1023342 - T 83 -8.4 -4.12198 | opp_overlap 1023342 TATAATCTTTTAAAA GCAAACTT GTAAA AAGTTTGC TTTCTTATACATTTA TERM 1149 1023342 - 1023362 + T 85 -8.4 -4.37211 | opp_overlap 1023342 TATAATCTTTTAAAA GCAAACTT GTAAA AAGTTTGC TTTCTTATACATTTA lon 1025767 - 1023392 - | ATP-dependent protease La TERM 1150 1024232 - 1024246 + g 75 -5.8 -4.74504 | opp_overlap 1024242 TGGAATTAAATATTT TTTCAT TAT ATGAAA TTTTTCACTTGGAGT TERM 1151 1024838 - 1024848 + g 70 -4 -5.00616 | overlap 1024842 TTTAATATCAAGTTT TTTC TTA GAAA TTTTTTCAAAAGGAA C8J_1015 1026431 - 1025784 - | putative lipoprotein TERM 1152 1025974 - 1025988 + g 74 -8.6 -3.37198 | overlap 1025972 TTTGTAAGCATTGTT TGAACC AAA GGTTCA TATTCTGTATAAGGA TERM 1153 1026681 - 1026707 + G 73 -3.8 -5.18643 | opp_overlap 1026686, overlap 1026677 1026686 AGTATTTGTAAGACT TAAAAGTCTTGA TGG TAAAGACTTTTC TTTTGTTTTAATTAA TERM 1154 1026686 - 1026702 + G 76 -3.7 -5.40279 | opp_overlap 1026686, overlap 1026677 1026681 TTGTAAGACTTAAAA GTCTTGA TGG TAAAGAC TTTTCTTTTGTTTTA C8J_1016 1026592 - 1026981 + | flagellar assembly protein FliW TERM 1155 1027109 - 1027080 - g 70 -3.6 -5.05079 | overlap 1027066 1027081 1027101 AGAAGTATAGAAAAA CTTCAAGCCCTC GCCAAA GAAGGCTTTAAA ACCTTACTTTACAAA TERM 1156 1027578 - 1027558 - g 70 -6.2 -4.18018 | GCTCTTTATTTAAAA GCTCTAGT GCTTT ACTAGAAC ATGAACATCCAGCTA proC 1026981 - 1027712 + | pyrroline-5-carboxylate reductase C8J_1018 1027709 - 1028011 + | transformation system protein TERM 1157 1028198 - 1028179 - g 84 -6.6 -5.28983 | opp_overlap 1028177 1028179 1028183 CTTAAAATAGAAAAA TTAATACA AAAT TGTATTAA TATTACATTTTCACA TERM 1158 1028635 - 1028618 - g 75 -4.9 -5.10877 | ACAATAAATTAAAAA TTTGCCT AAAA AGACAAA CAAAATATTGCCTTG C8J_1019 1028008 - 1028670 + | hypothetical protein C8J_1020 1028727 - 1029119 + | hypothetical protein C8J_1021 1029745 - 1029116 - | uroporphyrinogen-III synthase thiE 1030355 - 1029723 - | thiamine-phosphate pyrophosphorylase thiD 1031157 - 1030345 - | phosphomethylpyrimidine kinase C8J_1024 1031840 - 1031154 - | nuclease C8J_1025 1032598 - 1031837 - | hypothetical protein TERM 1159 1032462 - 1032478 + g 83 -2.3 -5.89947 | TGAATGAAATTTAAA GTATTTT CAT AAAGTGC TTTTTTTTGACTTTC mfd 1035536 - 1032600 - | transcription-repair coupling factor TERM 1160 1034249 - 1034260 + g 71 -3 -5.24003 | TTTCAGAAGCTATGG CTAA AAGT TTAG TTTTTAATTTTTCTT TERM 1161 1035427 - 1035417 - G 72 -5.4 -4.6951 | ATCAGGTAAAACAAA GGTT TTT AACC CCTTAAATCGTGAAA TERM 1162 1035449 - 1035464 + g 70 -4 -4.93696 | ATCGTGAAACTTGAG CAAGTA AATC TGCTTG TTTTTCATCTTTACA C8J_1027 1035931 - 1035536 - | hypothetical protein C8J_1028 1036770 - 1035868 - | M24/M37 family peptidase TERM 1163 1036482 - 1036466 - GR 72 -7.3 -3.66178 | opp_overlap 1036466 1036464, overlap 1036478 GCTTCTAAGCCCAAA GCCTCTT CAA AAGAAGC TATTTTATCTTCTAT folC 1037917 - 1036757 - | folC bifunctional protein TERM 1164 1037299 - 1037319 + g 93 -5.5 -5.86965 | opp_overlap 1037298 1037301 1037316, overlap 1037301 1037316 AAGAAACTTGCAAAT TAGCTTTTT TTA AAAAAGCAA TTTTTTTTGCTAAAT TERM 1165 1037808 - 1037828 + g 70 -6.3 -4.11027 | opp_overlap 1037808 1037812, overlap 1037788 1037786 1037804 ATAAGTTGAATTATA GGAATATTT TTA AAATATTTC TTATATTTTTCATAC C8J_1030 1039304 - 1037907 - | hypothetical protein TERM 1166 1038479 - 1038495 + g 74 -2.3 -5.64006 | opp_overlap 1038479 CATCTGGTTTTAAAG TATTGAT AAA ATCCATA TTTTTTTCATTCGAT TERM 1167 1038654 - 1038670 + g 73 -8.1 -3.43774 | ATTTTCTTCACCTAT CACAAAA GGC TTTTGTG TTAAATTTTGTATAA C8J_1031 1039800 - 1039288 - | putative lipoprotein leuS 1042226 - 1039797 - | leucyl-tRNA synthetase TERM 1168 1041482 - 1041499 + g 86 -7.1 -5.33921 | opp_overlap 1041481 TTGTAGTAAAAACTT CTAAAGA ACTT TCTTTAG TTTTTTGCTTGCTTT secF 1043207 - 1042236 - | preprotein translocase subunit SecF secD 1044787 - 1043207 - | preprotein translocase subunit SecD C8J_1035 1045052 - 1044780 - | preprotein translocase subunit YajC TERM 1169 1045343 - 1045356 + Gr 77 -5.3 -4.99645 | opp_overlap 1045343 TTAGTGCCAATTATA CCAAT TATC ATTGG TTTTATTTATGGACT TERM 1170 1046027 - 1046012 - gR 83 -3.4 -5.8187 | opp_overlap 1046016, overlap 1046016 GACTTAACAAAAAAA TATTTT CTTA AAAATA TTGAAGAATTTTCCA cutE 1045025 - 1046350 + | apolipoprotein N-acyltransferase TERM 1171 1046458 - 1046443 - TR 70 -6.2 -4.13767 | opp_overlap 1046443 GTTTTTACCCCAAAA GCTAAA TTAA TTTAGC TTCCTTCCTAACTTT TERM 1172 1046546 - 1046574 + Tr 70 -7.6 -3.6014 | opp_overlap 1046546, overlap 1046544 ATTAATTCTTTATAA TTATACAAGCCT TATTT AAGCTTGTATAA TATTGTTAATTTTTT TERM 1173 1046574 - 1046546 - TR 80 -9.8 -3.31501 | opp_overlap 1046546 1046544 ATTAATTCTTTATAA TTATACAAGCCT TATTT AAGCTTGTATAA TATTGTTAATTTTTT metK 1047784 - 1046588 - | S-adenosylmethionine synthetase TERM 1174 1047218 - 1047230 + g 77 -7.7 -4.14392 | overlap 1047227 TATAGTATGGATACT TTGCG GTT CGCAA TTTTCAAAATTCGCC TERM 1175 1048755 - 1048741 - g 80 -10 -3.35224 | overlap 1048739 ATATTCCTGTAAATA TGGCAC TTT GTGCCA AACTTGGCATAGATA C8J_1038 1047924 - 1049147 + | serine/threonine transporter SstT pyrB 1049157 - 1050044 + | aspartate carbamoyltransferase catalytic subunit C8J_1040 1050048 - 1051769 + | M3 family peptidase C8J_1041 1051763 - 1052200 + | hypothetical protein TERM 1176 1052601 - 1052581 - g 77 -5.5 -4.98911 | CATGATAAAAACAAA GATAATGTC TAT GATATTATC AAATACATATCTTAT TERM 1177 1053006 - 1052984 - g 72 -5 -4.72272 | opp_overlap 1052984 1053000, overlap 1052993 1053000 GGCGTGGAGCAAAAA TTGAAAATAT TTT AAATTTTCAA AACGATTTTAAAAAT C8J_1042 1052197 - 1054272 + | ATP-dependent DNA helicase, UvrD/REP family truB 1054269 - 1055087 + | tRNA pseudouridine synthase B TERM 1178 1055231 - 1055219 - g 72 -6.3 -4.33785 | ATACTTAGAAAAGAA CTTGT TCA ACAAG TAAAGGATGAAAATT csrA 1055081 - 1055308 + | carbon storage regulator C8J_1045 1055305 - 1056072 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 1179 1056428 - 1056404 - g 82 -5.1 -5.47159 | TTTTAACACAAAAAA TAAAGTAAAAG CCA CTCTTGCTTTA GCTAAAGGGAAAAAT smpB 1056069 - 1056521 + | SsrA-binding protein C8J_1047 1056532 - 1057134 + | thioredoxin domain protein TERM 1180 1057264 - 1057240 - g 83 -8.8 -4.03413 | ATTTTGTTATAGAAA TTTTGATGAA TATTT TTCATCAAAA CCTTGAAAAAGCAAG C8J_1048 1057134 - 1057424 + | hypothetical protein TERM 1181 1057715 - 1057705 - gf 76 -2.6 -5.63236 | overlap 1057659 ATCTAAAAATAAAAA TAAT GAA ATTA AAATTATAGATTTTT TERM 1182 1058477 - 1058425 - gf 100 -9.6 -5.243 | gap 1, opp_overlap 1058430 1058435 1058438, overlap 1058429 1058431 TAAAGGATTAAAAAA CAAATATGAAGAATTTCATCATATA AAAT TAAACGATGAAATTCTTCA-ATATG CTGTAATTTGGGGTA TERM 1183 1058475 - 1058429 - gf 100 -9.9 -5.0917 | gap 1, opp_overlap 1058430 1058435 1058438, overlap 1058425 1058431 GGATTAAAAAACAAA TA-TGAAGAATTTCATCATATA AAAT TAAACGATGAAATTCTTCAATA TGCTGTAATTTGGGG TERM 1184 1058430 - 1058473 + GF 71 -8.4 -2.90725 | opp_overlap 1058429 1058425 1058431, overlap 1058435 1058438 GATTAAAAAACAAAT ATGAAGAATTTCATCATATA AAAT TAAACGATGAAATTCTTCAA TATGCTGTAATTTGG TERM 1185 1058472 - 1058431 - gf 100 -14.1 -4.15047 | opp_overlap 1058430 1058435 1058438, overlap 1058429 1058425 ATTAAAAAACAAATA TGAAGAATTTCATCATATA AAAT TAAACGATGAAATTCTTCA ATATGCTGTAATTTG clpA 1057421 - 1059550 + | ATP-dependent Clp protease, ATP-binding subunit ClpA aat 1059525 - 1060172 + | leucyl/phenylalanyl-tRNA--protein transferase TERM 1186 1060197 - 1060177 - T 100 -12.7 -5.12617 | opp_overlap 1060180, overlap 1060165 TAATTACTTAAAAAA TAAGCGTGA AAA TCACGCTTA TGACATTGCTTTAGC TERM 1187 1060180 - 1060194 + T 82 -10 -3.3858 | opp_overlap 1060177 TTACTTAAAAAATAA GCGTGA AAA TCACGC TTATGACATTGCTTT C8J_1051 1061484 - 1060195 - | methyl-accepting chemotaxis protein TERM 1188 1060668 - 1060686 + g 73 -3.8 -5.20606 | overlap 1060669 CATTTTTTTCTGCAA GTTCGCTT ATG AGGCGAAG TTTTTCTTGATCTTT TERM 1189 1060775 - 1060797 + g 80 -2 -5.74288 | opp_overlap 1060781, overlap 1060776 TCATTTTTAACCGGA TTATAACTTG CTT CAAGGTATAC TTTTTTATTATTTCT C8J_1052 1062203 - 1061565 - | putative integral membrane protein msrB 1062565 - 1062206 - | methionine sulfoxide reductase B TERM 1190 1063165 - 1063182 + G 71 -5.5 -4.44667 | opp_overlap 1063165, overlap 1063161 GGTTTAGAAGCTAAA GGGCTTG ATGC CAACCCC TTTGTTGTTCAAAAA TERM 1191 1063213 - 1063241 + G 76 -9.1 -3.11559 | opp_overlap 1063206 1063205 1063215, overlap 1063215 CTTCAAAGCTCCAAT CATTCCATTAAAA ATC TTTTAATGGAATA TCTTGAAATTATACT TERM 1192 1063239 - 1063215 - g 89 -11.7 -2.74514 | opp_overlap 1063215 1063213, overlap 1063206 1063205 TCAAAGCTCCAATCA TTCCATTAAAA ATC TTTTAATGGAA TATCTTGAAATTATA TERM 1193 1063215 - 1063239 + G 93 -11.7 -3.11326 | opp_overlap 1063206 1063205 1063215, overlap 1063213 TCAAAGCTCCAATCA TTCCATTAAAA ATC TTTTAATGGAA TATCTTGAAATTATA TERM 1194 1063390 - 1063378 - g 76 -2.7 -5.52384 | CTTGCAGGAAAAAAA CTTAA CAT TCAAG CAAGAATCAAAGCTG C8J_1054 1062655 - 1063452 + | hypothetical protein pssA 1064171 - 1063443 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 1195 1063997 - 1063963 - G 100 -12.4 -3.98075 | opp_overlap 1063968, overlap 1063964 1063968 AGATCAGCTAAAGAA TCAAATTCTACTCCAA ATT TTGAAGTAGAATTTGT AAGTCTTGCAACACG TERM 1196 1063996 - 1063964 - G 100 -15.9 -2.98122 | opp_overlap 1063968, overlap 1063963 1063968 GATCAGCTAAAGAAT CAAATTCTACTCCAA ATT TTGAAGTAGAATTTG TAAGTCTTGCAACAC TERM 1197 1063968 - 1063992 + g 82 -8.7 -3.9777 | opp_overlap 1063964 1063963 1063968 AGCTAAAGAATCAAA TTCTACTCCAA ATT TTGAAGTAGAA TTTGTAAGTCTTGCA TERM 1198 1063992 - 1063968 - G 100 -10.9 -4.15366 | opp_overlap 1063968, overlap 1063964 1063963 AGCTAAAGAATCAAA TTCTACTCCAA ATT TTGAAGTAGAA TTTGTAAGTCTTGCA TERM 1199 1064123 - 1064113 - G 83 -6.8 -5.06103 | ATAACCCCTAAAAAA GCTG AAG CAGC TGTAAAAAGATTGGG C8J_1056 1064798 - 1064181 - | phosphatidylserine decarboxylase-related protein ftsH 1066732 - 1064795 - | cell division protein FtsH TERM 1200 1065077 - 1065087 + g 70 -4 -4.85782 | opp_overlap 1065077 TTGCCCACCACTTAA GAAA GTA TTTC TTTGTTTTTCAAGCA C8J_1058 1067581 - 1066736 - | ribosomal protein L11 methyltransferase cheY 1067996 - 1067604 - | chemotaxis protein CheY wlaM 1069002 - 1068109 - | general glycosylation pathway protein TERM 1201 1068389 - 1068378 - G 70 -4.4 -4.98531 | TTGCCAAATCAAAAA TAGC TAAA GCTA AAGTTATGGCAATGG wlaL 1070774 - 1069002 - | putative sugar epimerase/dehydratase TERM 1202 1069217 - 1069258 + g 72 -2.6 -5.47821 | gap 1 CTTTTCTTAAACCTG TGATTTTAATTTCTAAATC ATTGC GATT-AGAAAGTAAAAGCA TTTTTTTAGCTAAAT TERM 1203 1069985 - 1069975 - G 72 -4.6 -5.00616 | TTGTCTTTTAAAAAA GCCG CCA CAGC ACTATCGTCTAAATC TERM 1204 1070527 - 1070511 - G 76 -2.9 -5.64328 | AAGAAAAAAACAAAA CTCAGCT AAA AGCAAAG CGATAAAAATTTTTC wlaK 1071936 - 1070776 - | DegT family aminotransferase pglD 1072624 - 1072034 - | general glycosylation pathway protein pglC 1073213 - 1072611 - | general glycosylation pathway protein TERM 1205 1072734 - 1072723 - G 71 -3 -5.33921 | AAATCAAGCAAAAAA GAAA TATT TTTC ACATAATACACATCA TERM 1206 1073165 - 1073153 - G 75 -4.1 -5.26316 | TCACCGGAGAAAAAA GTACT AAA AGCAC TAAAGCTAAAATAAA pglA 1074336 - 1073206 - | general glycosylation pathway protein TERM 1207 1073766 - 1073796 + g 82 -4.2 -5.54192 | TCCAAAAAAGCTCTT TTTTTTCCGATT CTATATA AATAGGAAAAAA TTTTTTTAAATTGAT wlaF 1076487 - 1074346 - | general glycosylation pathway protein pglJ 1077588 - 1076491 - | general glycosylation pathway protein pglI 1078505 - 1077576 - | general glycosylation pathway protein TERM 1208 1077656 - 1077673 + g 70 -4.1 -4.91109 | opp_overlap 1077656 TTAAAATGAGTAATA TCAAAGC AGGA GCGTTGA TTTTTATACTCAGGC TERM 1209 1077703 - 1077720 + g 72 -4.3 -5.08011 | opp_overlap 1077703 1077696 CTTTTAAACAAACAC TTATAAA GAGC TTTATAA TTTTTTGCAAGTTTT wlaC 1079574 - 1078498 - | general glycosylation pathway protein TERM 1210 1078798 - 1078812 + g 72 -5 -4.72272 | opp_overlap 1078798 1078799 TACAAAAGAACAAAG GCAAAG CAC TTTTGC TTTTTCATAAAGAGC TERM 1211 1079180 - 1079168 - G 70 -4.1 -4.95806 | AAAGCATCACAAAAA GGATA GCT TACCC TTCTTAAAAAACGCC wlaB 1081268 - 1079574 - | ABC-type transport protein TERM 1212 1080832 - 1080822 - G 72 -4 -5.1166 | CATCAAAAGTAAAAA TGAT GAA ATCA TAGTGCTTAGATTAT TERM 1213 1081144 - 1081129 - G 74 -3.3 -5.4593 | TCAAAATAAGAAAAA TCACT AGCCAA AGTGA TAAAAGGCATTACCA TERM 1214 1081243 - 1081205 - G 100 -12.8 -5.18561 | opp_overlap 1081218, overlap 1081218 CAAATACTGAAAAAA CAAGCAAGAAAAATAAAA AAT TTTTATCTTCCTTGCTTA AAATAAAAAAAAGTT TERM 1215 1081230 - 1081218 - G 73 -3.5 -5.23396 | opp_overlap 1081218, overlap 1081205 AACAAGCAAGAAAAA TAAAA AAT TTTTA TCTTCCTTGCTTAAA galE 1082248 - 1081262 - | UDP-glucose 4-epimerase wlaX 1083101 - 1082307 - | polysaccharide biosynthesis protein TERM 1216 1082496 - 1082512 + g 70 -3.7 -5.10029 | overlap 1082509 ATTTAAAACATCACT TTCACAA TAT TCGTGAA TTTTTTCAAGTTCAT waaC 1083167 - 1084195 + | lipopolysaccharide heptosyltransferase I waaM 1084185 - 1085063 + | lipid A biosynthesis lauroyl acyltransferase C8J_1075 1085060 - 1085761 + | hypothetical protein C8J_1076 1085772 - 1086650 + | hypothetical protein C8J_1077 1086650 - 1087681 + | hypothetical protein TERM 1217 1087838 - 1087852 + G 70 -4.4 -4.94992 | GTGATCATGCTAATT TAAATT CAG AATTTA TTTTTATAGCTTTAA C8J_1078 1087684 - 1088109 + | hypothetical protein C8J_1079 1088131 - 1088538 + | hypothetical protein C8J_1080 1088528 - 1088998 + | hypothetical protein C8J_1081 1088991 - 1089809 + | hypothetical protein TERM 1218 1090841 - 1090815 - gf 74 -5.4 -4.84582 | AAAAAATATAGAAAA TATAAAAAAATT TCC AATTTTTTAATA ATAGTATGTTTCTTT C8J_1082 1089828 - 1090892 + | hypothetical protein C8J_1083 1090847 - 1091956 + | hypothetical protein C8J_1084 1091925 - 1093007 + | hypothetical protein C8J_1085 1094294 - 1093041 - | hypothetical protein TERM 1219 1093569 - 1093582 + g 74 -5.3 -4.91109 | opp_overlap 1093569 TTCTTTAAAATTAAG CTCTT TAGC AAGAG TTTTTATAGTGGCAA C8J_1086 1095193 - 1094291 - | hypothetical protein TERM 1220 1095039 - 1095073 + g 100 -10.3 -4.37554 | TTTAAAGGTGATGTT GGATTTTTAGATTTT TCGTC AAAATCAAAAAATCC TTTGTGTTTAGATTT C8J_1087 1095305 - 1095177 - | hypothetical protein TERM 1221 1096135 - 1096103 - g 74 -2.1 -5.51612 | overlap 1096091 1096108 AGATAAAAAATAAAA TCATATTTTTTATAC CTA GTTTAAAAAAATTGA GAAAATATGAATAAT C8J_1088 1095376 - 1096149 + | hypothetical protein TERM 1222 1096805 - 1096795 - g 72 -2.6 -5.34309 | ATTATCAAATAAAAA TAAT GAG ATTA TGAAGATAATGCAAG TERM 1223 1096980 - 1096945 - g 76 -9.3 -3.10018 | opp_overlap 1096947, overlap 1096943 1096941 AACAAATGATACAGA TATTCATCTCTTGCA ATATCA TGCAAAAGATAAATA TAGTGATAAATTATG C8J_1089 1096142 - 1097098 + | hypothetical protein TERM 1224 1097969 - 1097953 - g 71 -2.4 -5.39681 | overlap 1097964 ATAATCAAAGAAAAA TTAAAA GAAGA TTTTAA TAATAAAAATATAAA C8J_1090 1097095 - 1098054 + | hypothetical protein waaV 1098875 - 1098057 - | lipooligosaccharide biosynthesis glycosyltransferase TERM 1225 1098155 - 1098144 - G 75 -4.4 -5.33405 | opp_overlap 1098144, overlap 1098133 TTCATCAAATAAAAA CTCT CTGG AGAG TCTTTTTATGATTTC waaF 1098934 - 1099884 + | ADP-heptose--LPS heptosyltransferase II TERM 1226 1100676 - 1100692 + G 76 -8 -3.92694 | TTTAAATATTTTTGA GGCTTG GGCAA CAAGCC TTTCGTATACTTTTC C8J_1093 1099936 - 1101435 + | hypothetical protein C8J_1094 1101445 - 1102560 + | hypothetical protein TERM 1227 1102560 - 1102548 - T 80 -4.9 -5.40625 | AGAGTATATAAAAAA TCAAA ATT TTTGA AAATTAAAAACCTTC gmhA-1 1103124 - 1102564 - | phosphoheptose isomerase waaE 1104506 - 1103121 - | D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase waaD 1105452 - 1104499 - | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 1228 1104877 - 1104898 + g 72 -4.5 -4.87786 | TTGATGGCCAAATTG CAAAACC ATAGAAGC GGTTTTG TTTTTATAAAATTCG C8J_1098 1106013 - 1105453 - | putative phosphatase C8J_1099 1106095 - 1106397 + | cytochrome c553 TERM 1229 1106430 - 1106409 - T 86 -6.7 -5.06103 | gap 1, opp_overlap 1106409, overlap 1106398 ATAATTTCTAAAAAA GGCTTTTCTT TTT AAGAAA-GCC TTTTTTTATTCAAAG TERM 1230 1106409 - 1106430 + T 100 -6.7 -5.7946 | gap 1, opp_overlap 1106398 1106409 ATAATTTCTAAAAAA GGCTTTTCTT TTT AAGAAA-GCC TTTTTTTATTCAAAG C8J_1100 1106626 - 1106420 - | small hydrophobic protein C8J_1101 1108974 - 1106623 - | heavy metal translocating P-type ATPase TERM 1231 1106767 - 1106756 - G 82 -4.4 -5.50774 | opp_overlap 1106756, overlap 1106757 TAGAACAAAGAAAAA GCAA GGTT TTGC TTGATAATTTTAAAG rho 1109090 - 1110388 + | transcription termination factor Rho TERM 1232 1111860 - 1111842 - g 77 -9.6 -2.95472 | overlap 1111841 ATATGCTTAAAGAAG GGGCCAAA AAA TTTGACCC ACAAGAAGATCTTAA dnaX 1110392 - 1111921 + | DNA polymerase III subunits gamma and tau C8J_1104 1112439 - 1111918 - | hypothetical protein C8J_1105 1114610 - 1112511 - | copper-translocating P-type ATPase C8J_1106 1114804 - 1114610 - | hypothetical protein C8J_1107 1115744 - 1114794 - | cation efflux family protein TERM 1233 1115746 - 1115796 + r 77 -9.5 -2.96101 | gap 1, opp_overlap 1115744, overlap 1115745 AAAAATTTATACATC TTATATCCTTTTT-GCTTGACATT TTAA GATATTAAGCTAAAAAGGATATAA ATATTTGTTATTTTT C8J_1108 1116081 - 1115818 - | hypothetical protein C8J_1109 1116646 - 1116152 - | putative integral membrane protein TERM 1234 1116353 - 1116341 - G 71 -7.7 -3.42553 | opp_overlap 1116341, overlap 1116340 AATAAGATACAAAAT CGCTT TAT AAGCG TAAATTCCAGGTATC C8J_1110 1117419 - 1116643 - | hypothetical protein TERM 1235 1116800 - 1116790 - G 79 -5.4 -5.3236 | AGAATTTATAAAAAA TACC CCT GGTA TAAGATACAAGATAC TERM 1236 1118395 - 1118382 - g 70 -3.8 -5.10877 | ACAACAAATCAAAAA CGCT ATACAA AGCG TAAAAGATAAAATTT ldh 1117486 - 1118412 + | L-lactate dehydrogenase TERM 1237 1118413 - 1118427 + T 100 -8.6 -5.1166 | opp_overlap 1118409 1118413 AAAGATAAAATTTAA GCCTTT TTA AAAGGC TTTTTGATTTTGATA TERM 1238 1118427 - 1118413 - T 75 -8.6 -3.46285 | opp_overlap 1118413, overlap 1118409 AAAGATAAAATTTAA GCCTTT TTA AAAGGC TTTTTGATTTTGATA C8J_1112 1119011 - 1118409 - | putative integral membrane protein (DedA-like protein) TERM 1239 1119005 - 1118995 - G 70 -4 -4.89477 | opp_overlap 1118995 GTCTCAACAATAAAA GAAA TGA TTTC TTGCATATTAGCCTT TERM 1240 1119086 - 1119072 - R 86 -7.1 -4.946 | opp_overlap 1119072, overlap 1119066 ATTAAACAGTAAAAA GCGGT TTTAC ACCGC TTTTTTTATTTACCT TERM 1241 1119072 - 1119086 + r 100 -7.1 -5.96894 | opp_overlap 1119072 1119066 ATTAAACAGTAAAAA GCGGT TTTAC ACCGC TTTTTTTATTTACCT C8J_1113 1119319 - 1119092 - | putative periplasmic protein C8J_1114 1120739 - 1119330 - | hypothetical protein TERM 1242 1120622 - 1120643 + g 73 -5.9 -4.62872 | overlap 1120620 1120610 1120637 TGATTTCTGCAAGTT CAGCTTG AATTTGCG CAAGCTG TTTTTGAAGCTTGGT TERM 1243 1120738 - 1120722 - G 70 -8.1 -3.12605 | opp_overlap 1120718, overlap 1120708 1120718 1120721 GGCACTTAAAATAAG TGAAAAC TTA GTTTTCA TAATCATAACTCCTT TERM 1244 1120836 - 1120857 + r 83 -8.8 -3.98842 | CATTAATCATTTTTA GCTAGTCA AACTTA TGACTAGC TTTGTAAATATTGTA ppi 1121385 - 1120903 - | peptidyl-prolyl cis-trans isomerase B C8J_1116 1122102 - 1121395 - | hypothetical protein TERM 1245 1122169 - 1122192 + H 78 -6.9 -4.56597 | opp_overlap 1122173, overlap 1122173 GGCTAATTAAAGCTT TAAATGGTA TGATTT TACCATTTA TTTTTGGGGAGAAGC C8J_1117 1122211 - 1122552 + | multidrug resistance protein, SMR family C8J_1118 1122552 - 1122860 + | multidrug resistance protein, SMR family TERM 1246 1122850 - 1122888 + T 73 -4 -5.29885 | opp_overlap 1122835 1122857 1122863, overlap 1122855 1122857 1122863 TAGCAGTATTTTTGC TAAATTATTAAAACAGCA AAA TGCTGTTTTAATGTTCCA TTTTGTTTTTCGCTT TERM 1247 1122855 - 1122883 + T 100 -12.7 -3.5268 | opp_overlap 1122857 1122863, overlap 1122850 1122857 1122863 GTATTTTTGCTAAAT TATTAAAACAGCA AAA TGCTGTTTTAATG TTCCATTTTGTTTTT TERM 1248 1122857 - 1122881 + T 100 -13.1 -3.29811 | opp_overlap 1122857 1122863, overlap 1122855 1122850 1122863 ATTTTTGCTAAATTA TTAAAACAGCA AAA TGCTGTTTTAA TGTTCCATTTTGTTT TERM 1249 1122881 - 1122857 - T 100 -13.1 -2.90615 | opp_overlap 1122857 1122855 1122850 1122863, overlap 1122863 ATTTTTGCTAAATTA TTAAAACAGCA AAA TGCTGTTTTAA TGTTCCATTTTGTTT TERM 1250 1122875 - 1122863 - T 78 -7.7 -4.39386 | opp_overlap 1122863 1122857 1122855 1122850, overlap 1122857 GCTAAATTATTAAAA CAGCA AAA TGCTG TTTTAATGTTCCATT TERM 1251 1122863 - 1122875 + T 78 -7.7 -4.44284 | opp_overlap 1122857 1122863, overlap 1122857 1122855 1122850 GCTAAATTATTAAAA CAGCA AAA TGCTG TTTTAATGTTCCATT argS 1124470 - 1122878 - | arginyl-tRNA synthetase TERM 1252 1122976 - 1122951 - G 74 -7.1 -4.00469 | opp_overlap 1122951 CTAAGAGCAACTAAA GAAAATAATTT AAGC AAATCATTTTC ATTTATAGAACCTAC C8J_1120 1124721 - 1124482 - | twin-arginine translocation protein, TatA/E family gmk 1125340 - 1124723 - | guanylate kinase C8J_1122 1126983 - 1125343 - | hypothetical protein TERM 1253 1125390 - 1125410 + g 74 -9.1 -2.87136 | overlap 1125405 TATTCATATTCATAC CCTTAAGAG CAG CTTTTAAGG TATCATCCTTAATAC fliR 1127807 - 1127040 - | flagellar biosynthesis protein FliR C8J_1124 1128429 - 1127794 - | ABC transporter ATP-binding protein TERM 1254 1128414 - 1128381 - G 70 -5.3 -4.64657 | TTAAACCCTCAAAAA GCGGATAATCAAAAC TATG GCTTAAATTTTCCGC TCTTAAGAGTTCCAT tsf 1129515 - 1128442 - | elongation factor Ts TERM 1255 1128711 - 1128723 + g 79 -7.7 -4.30001 | overlap 1128708 TTTCAGGTTTACCTT GAGCT TTA AGCTC TTCTTTGATTTTTTC rpsB 1130306 - 1129515 - | 30S ribosomal protein S2 C8J_1127 1131585 - 1130422 - | cyclopropane-fatty-acyl-phospholipid synthase, putative TERM 1256 1131707 - 1131666 - R 76 -3.9 -5.61689 | opp_overlap 1131670, overlap 1131659 1131669 1131671 AAAATGAAGAAAAAA TAAGATTTTTGCCATTATC ACTA AATAATGGCAAAAAATGTA ATATTAATGTAATTT TERM 1257 1131704 - 1131669 - R 74 -5.6 -4.82661 | opp_overlap 1131670, overlap 1131659 1131666 1131671 ATGAAGAAAAAATAA GATTTTTGCCATTATC ACTA AATAATGGCAAAAAAT GTAATATTAATGTAA TERM 1258 1131670 - 1131703 + r 71 -8.4 -2.94062 | opp_overlap 1131659 1131669 1131666 1131671 TGAAGAAAAAATAAG ATTTTTGCCATTAT CACTAA ATAATGGCAAAAAA TGTAATATTAATGTA TERM 1259 1131702 - 1131671 - R 100 -12.6 -4.00001 | opp_overlap 1131670, overlap 1131659 1131669 1131666 GAAGAAAAAATAAGA TTTTTGCCATTATC ACTA AATAATGGCAAAAA ATGTAATATTAATGT petC 1132835 - 1131711 - | ubiquinol--cytochrome c reductase, cytochrome c1 subunit petB 1134082 - 1132832 - | ubiquinol--cytochrome c reductase, cytochrome b subunit petA 1134587 - 1134084 - | ubiquinol--cytochrome c reductase, iron-sulfur subunit TERM 1260 1134472 - 1134490 + g 78 -3.1 -5.52384 | CCTGCAGCTTTGACA CTTGGAA GCGGA TCCCAAG TTTTTTTCATCGCAA arsB 1135963 - 1134677 - | putative arsenical pump membrane protein gidA 1137823 - 1135964 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1261 1137902 - 1137869 - R 77 -9.1 -3.38034 | opp_overlap 1137867, overlap 1137867 1137870 AAAGATTATATAATA TTTAGACTTAAAACA AACT CGTTTTAAGTCTAAC AAAAATTTATTTAGC TERM 1262 1137901 - 1137870 - R 95 -12.6 -2.61736 | opp_overlap 1137867, overlap 1137869 1137867 AAGATTATATAATAT TTAGACTTAAAACA AACT CGTTTTAAGTCTAA CAAAAATTTATTTAG C8J_1133 1138406 - 1137909 - | putative signal-transduction sensor protein C8J_1134 1139803 - 1138424 - | MCP-domain-containing signal transduction protein TERM 1263 1139075 - 1139099 + g 83 -8.8 -4.14392 | ATCGGCTATATCGCG TATTACTTCA ACCAC TGAAGTAATA TTTTGGGAATTAGCC TERM 1264 1139234 - 1139246 + g 71 -4.9 -4.78107 | opp_overlap 1139234 AGTAATGGCATCAAC TGTAT CAT ATACA TTTTTCATCATGCTA C8J_1135 1140418 - 1139924 - | putative signal-transduction sensor protein TERM 1265 1139982 - 1139950 - G 71 -4.5 -4.74103 | gap 1 CTTGTAAGTTAAAAA TAAGTTCATTATAA GTCATT TTATAA-GAACTTA CAATATCCATTAAAG dctA 1140687 - 1142063 + | C4-dicarboxylate transport protein C8J_1137 1142866 - 1142060 - | putative periplasmic protein TERM 1266 1142754 - 1142789 + g 72 -4.2 -5.14563 | overlap 1142757 GCTTCTTTGGTATTT TCATAATCAAAGTGCT CCCA AGAATTTTGATTATTA TTTTTTGCTAAAGCC TERM 1267 1142757 - 1142786 + g 73 -5.9 -4.67552 | overlap 1142754 TCTTTGGTATTTTCA TAATCAAAGTGCT CCCA AGAATTTTGATTA TTATTTTTTGCTAAA TERM 1268 1144470 - 1144484 + G 74 -8.6 -3.29461 | CTTGGATTATCACTT TACCAG CCG CTGGTA TTATGGCAGCACTTG C8J_1138 1143008 - 1144534 + | phosphate transporter TERM 1269 1144543 - 1144557 + T 78 -4.4 -5.41359 | overlap 1144532 AATTTAAGTAAAGCT TATTTT TCT AAAATA TTTTTTCCTTTAATT C8J_1139 1145720 - 1144542 - | dihydroorotase TERM 1270 1144622 - 1144636 + g 71 -5.8 -4.37199 | opp_overlap 1144618 1144616, overlap 1144618 1144626 CAGAATAAAGAGAAC TTTTTG GAG CAAAAA TTTCTTCATTCTCAT gpsA 1146623 - 1145730 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase gatB 1148041 - 1146623 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1271 1147977 - 1147989 + g 77 -4.9 -5.20783 | opp_overlap 1147966 GAAGTTGCACATGAG CAAAA GAT TTTTG TTTTTGTATTTAACT TERM 1272 1148246 - 1148235 - g 70 -5.8 -4.33165 | opp_overlap 1148234 CTAAAGTTATGAAAA CACC TAAG GGTG ATGATATTAGCGTGT luxS 1148156 - 1148650 + | S-ribosylhomocysteinase TERM 1273 1149397 - 1149385 - g 74 -3.4 -5.48163 | opp_overlap 1149385, overlap 1149344 1149396 AAACAAACCAAAAAA GCTT GTTTA AAGC TTTTAAAAGCCTTCG C8J_1143 1148962 - 1149852 + | oxidoreductase, 2OG-Fe(II) oxygenase family C8J_1144 1149964 - 1150734 + | NLPA family lipoprotein metE 1150746 - 1153010 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 1274 1153098 - 1153117 + G 82 -7.9 -4.38712 | opp_overlap 1153097 GCTATCTTAGATGAT TTAGGGC AATTAA GCCCTAA TTTTATCAGCGTAAC metF 1153020 - 1153868 + | 5,10-methylenetetrahydrofolate reductase atpB 1154758 - 1154078 - | F0F1 ATP synthase subunit A radA 1156167 - 1154827 - | DNA repair protein RadA ftsY 1157033 - 1156167 - | signal recognition particle-docking protein FtsY TERM 1275 1156685 - 1156707 + g 77 -5.7 -4.99035 | AAGTATCACACGCCC CTAAAATCA CTTTT TGATTTTGG TTTTTGTATAAATAA TERM 1276 1157036 - 1157026 - G 72 -2.6 -5.40072 | CCTTTTTTAAAAAAA TTAA ACA TTAA AGTATAGCCTTTTGT C8J_1150 1157590 - 1157033 - | putative lipoprotein TERM 1277 1157777 - 1157755 - gH 70 -5 -4.57533 | overlap 1157750 AACAAGATTATAAAA TATTTAAAGA ATG TCTTAAAATA ATAAAACTATTTAAA TERM 1278 1158231 - 1158221 - g 89 -4 -5.85425 | opp_overlap 1158221 GAAAGAAAGAAAAAA TGAT AGA ATCA CTTATCGCACTTATA C8J_1151 1157673 - 1158299 + | hypothetical protein TERM 1279 1158514 - 1158502 - gf 78 -3.4 -5.54403 | AAAAAAGAACAAAAA CTTC AGCAA GAAG AAGAAAAACTAAAAG C8J_1152 1158220 - 1159773 + | phosphodiesterase C8J_1153 1159782 - 1160339 + | DedA family protein TERM 1280 1160486 - 1160468 - gT 71 -3.2 -5.18355 | TTTAAAAACCAAAAA CATTACTT TAT AAATAACG CTCTATTAACGCACC TERM 1281 1161428 - 1161442 + GT 73 -3.6 -5.22039 | GGAGATTTGCTCAAT TTTATC TTA GATGAA TTTTTTAAATTTAAA rbn 1162348 - 1161542 - | putative ribonuclease BN comE3 1160339 - 1161598 + | putative integral membrane protein TERM 1282 1162134 - 1162151 + gT 70 -8.5 -2.6155 | opp_overlap 1162138, overlap 1162124 1162133 GTATCGATGTAGGTA GCAACAA CATC TTGTTGC GTTGGTATTAAAAAA glcD 1163734 - 1162352 - | glycolate oxidase, subunit GlcD C8J_1157 1164462 - 1163737 - | hypothetical protein C8J_1158 1164584 - 1165744 + | peptidase, M23/M37 family C8J_1159 1165944 - 1165741 - | hypothetical protein TERM 1283 1165788 - 1165806 + g 100 -8.2 -5.67529 | opp_overlap 1165788 TGATTAAAGAATTTA GAAGAGTT GCA AGCTCTTC TTTTTCTTTTTCATT C8J_1160 1166626 - 1165946 - | hypothetical protein ribE 1167201 - 1166590 - | riboflavin synthase subunit alpha TERM 1284 1167105 - 1167126 + gr 81 -7.3 -4.67641 | overlap 1167121 CATTTATGGCTATGC TATCGCCAA GATT TGGGCGATA TTTTGCTTTTAAGCT C8J_1162 1169750 - 1167210 - | hypothetical protein TERM 1285 1168483 - 1168493 + g 79 -5.4 -5.27779 | opp_overlap 1168483 TTTTTTAAATTATAA CTTC CTT GAAG TTTTTTGATATTAAG TERM 1286 1168695 - 1168678 - G 70 -3.5 -5.09245 | TCAAAATTAGAAAAA TCCAAAT CTGC ATTTAGA AGTTTAGCATTTAAA groES 1169912 - 1170172 + | co-chaperonin GroES TERM 1287 1170641 - 1170616 - g 76 -2.7 -5.63645 | gap 1 GTAAAAGATAAAAAA GAAATTGCA-CA AGT TGCTACAATCTC AGCCAATTCTGATGA TERM 1288 1171300 - 1171282 - g 70 -3.9 -5.05601 | TATGATAGAGAAAAA TTACAAG AAAGA CTTGCAA AATTAAGTGGCGGTG groEL 1170193 - 1171830 + | chaperonin GroEL TERM 1289 1171853 - 1171869 + T 82 -10.9 -2.74514 | overlap 1171845 TCCAACCTCTTATCA GCAAGGA TTT TCCTTGC TGATTACCAATTTAA C8J_1165 1173063 - 1171873 - | sensor histidine kinase TERM 1290 1172189 - 1172206 + g 79 -8.5 -3.93597 | overlap 1172177 GGAGCAAAAATATTT GCTTGAT TTAA ATCAAGC TTTAGTGTAATTTTT C8J_1166 1173721 - 1173056 - | DNA-binding response regulator C8J_1167 1173869 - 1174468 + | hemerythrin family non-heme iron protein C8J_1168 1174479 - 1174850 + | hypothetical protein TERM 1291 1174854 - 1174881 + T 71 -8.6 -3.02867 | opp_overlap 1174855, overlap 1174853 CAAACAAAATAAAAA ACTTTATCACAA TTTT TTGTGATAAAGA CTTATTAATTTTTTA TERM 1292 1174880 - 1174855 - T 100 -12.1 -5.95449 | opp_overlap 1174854 1174853 AAACAAAATAAAAAA CTTTATCACAA TTTT TTGTGATAAAG ACTTATTAATTTTTT C8J_1169 1176354 - 1175107 - | sensor histidine kinase TERM 1293 1175835 - 1175850 + g 77 -4.8 -5.19916 | TAAGCTTTCCTTGGG CAAATT TATC AATTTG TTTTTTAAGTCTTTT C8J_1170 1177025 - 1176351 - | DNA-binding response regulator TERM 1294 1177073 - 1177097 + r 100 -10.1 -5.27335 | opp_overlap 1177073 1177069 1177076 1177081 TTAAACTAAAATTTA TAACGAAAGGA AAA TCCTTCCGTTA TTTTTATTTAAGCAC TERM 1295 1177097 - 1177073 - R 88 -12.3 -2.82666 | opp_overlap 1177073, overlap 1177069 1177076 1177081 TTAAACTAAAATTTA TAACGAAAGGA AAA TCCTTCCGTTA TTTTTATTTAAGCAC TERM 1296 1177094 - 1177076 - R 82 -9.6 -3.53787 | opp_overlap 1177073, overlap 1177073 1177069 1177081 AACTAAAATTTATAA CGAAAGGA AAA TCCTTCCG TTATTTTTATTTAAG htrA 1178519 - 1177101 - | protease DO TERM 1297 1178322 - 1178302 - G 90 -6.9 -5.55664 | opp_overlap 1178302, overlap 1178287 GGATCATTAAAAAAA TCATCCAAA GGG CTTGGACGA TTTGCTCTTGTAATA cbpA 1178719 - 1179612 + | co-chaperone protein DnaJ hspR 1179628 - 1180002 + | MerR family transcriptional regulator kefB 1180008 - 1181633 + | sodium/hydrogen exchanger family protein C8J_1175 1181643 - 1181975 + | hypothetical protein C8J_1176 1181972 - 1182592 + | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein glyS 1182648 - 1184642 + | glycyl-tRNA synthetase subunit beta TERM 1298 1184763 - 1184746 - g 75 -4.3 -5.25699 | opp_overlap 1184735 1184747, overlap 1184735 1184747 ACTAGATAAGAAAAA TTTTTTA TCTT TAAAAAA TAATGATAAAAATAT TERM 1299 1184977 - 1184959 - g 72 -2.5 -5.46706 | AGTTGAAAACAAAAA GATTTTT CCACC AAAAACC GTACAAGAACGCATC C8J_1178 1184639 - 1185460 + | peptidase, M23/M37 family TERM 1300 1185709 - 1185728 + G 73 -3.7 -5.1861 | CTTGAATTAAGGCCT GAAATTT TTTCTC AAATTTC TTTTTTCGTCATAGA TERM 1301 1186132 - 1186154 + G 70 -4.2 -5.00616 | opp_overlap 1186110 1186144, overlap 1186133 CACGAAGTTTTTAGC CCTTTTGAAG TAT CTTTAAAAGA TTTTTTCGGCAAAAG TERM 1302 1186133 - 1186153 + G 72 -7.7 -3.60048 | opp_overlap 1186110 1186144, overlap 1186132 ACGAAGTTTTTAGCC CTTTTGAAG TAT CTTTAAAAG ATTTTTTCGGCAAAA C8J_1179 1185457 - 1186407 + | hypothetical protein C8J_1180 1187378 - 1186404 - | phosphatase, Ppx/GppA family TERM 1303 1186969 - 1186948 - G 72 -5.3 -4.71222 | ATACCAAAATCAAAA CTTTTAAAA CTTT TTCTAAAAG AAAGCTCACAAGAAG TERM 1304 1187177 - 1187161 - G 70 -8.7 -2.71712 | opp_overlap 1187161 1187160, overlap 1187160 CTTGCTTTTCTAAAG GCTGCAG TCG CTACAGC TCTTGCTTTGCTTAA TERM 1305 1188036 - 1188013 - g 76 -8.9 -3.543 | opp_overlap 1188013 1188012, overlap 1188001 1188006 1188014 TTACAAAATTTAGAA CTCTGTGCC AAAAAA GGCACAGAA CTTGGTTTAAAAGTA TERM 1306 1188035 - 1188014 - g 78 -10.2 -2.71857 | opp_overlap 1188013 1188012, overlap 1188001 1188006 1188013 TACAAAATTTAGAAC TCTGTGCC AAAAAA GGCACAGA ACTTGGTTTAAAAGT pdxJ 1187434 - 1188207 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 1307 1189015 - 1188993 - g 70 -6.4 -4.16301 | AATTTACAGAAAGAA TTGCTTTTAA ATT TTAAAGGCAA GGGCGTTTATCTACC TERM 1308 1189044 - 1189054 + G 72 -6.8 -4.08216 | overlap 1189050 1189051 1189053 CCCTATCCTTTAGTA GCTG ATA CAGC TTTTACCAAGGCTGG pdxA 1188204 - 1189298 + | 4-hydroxythreonine-4-phosphate dehydrogenase C8J_1183 1189890 - 1189288 - | putative periplasmic protein TERM 1309 1190031 - 1190047 + G 85 -7.3 -4.99638 | opp_overlap 1190013 AAAAAAGCTCTTTTT GCACTAG CTC TTAGTGC TTTTTGTATGGGTGT TERM 1310 1191184 - 1191174 - g 78 -4 -5.42265 | TTAAATTATAAAAAA TTTC AAA GAAA AAGTTTAAAAAAGAT C8J_1184 1190004 - 1191203 + | putative transmembrane transport protein C8J_1185 1191259 - 1191579 + | hypothetical protein TERM 1311 1191629 - 1191609 - f 83 -8.4 -4.17516 | CTCAAACTACACAAA CGAGAATT CCAAT AATTCTCG TAAAATTTCTCATAA hemE 1191759 - 1192781 + | uroporphyrinogen decarboxylase TERM 1312 1193097 - 1193081 - g 95 -8.1 -5.56264 | GCTAAAGATAAAAAA TTGCTTA TTT TAAGCAA TGGCACAGCTGTATT C8J_1187 1192778 - 1193680 + | radical SAM domain-containing protein C8J_1188 1194873 - 1193677 - | hypothetical protein TERM 1313 1194211 - 1194195 - G 72 -6.7 -4.18494 | CATTTTCATTTAAAA TTTTATC CTT GATAAAA ATCAAATGAAAGTCA uvrC 1196677 - 1194875 - | excinuclease ABC subunit C TERM 1314 1195368 - 1195379 + g 71 -3 -5.28983 | AAAACTTCACGCATT TGAT CATA ATCA TTTTTATGTTTTAAA C8J_1190 1197140 - 1196670 - | hypothetical protein TERM 1315 1197776 - 1197766 - g 78 -4 -5.41746 | AATCTTCCAAAAAAA CAAA CTG TTTG GATGAGTCATTCTGA TERM 1316 1198204 - 1198194 - g 70 -5.4 -4.60041 | ATTTATGTTTAAAAA TACC TTA GGTA TCGATCTTATCAGCA TERM 1317 1198560 - 1198572 + G 73 -9.1 -2.55847 | overlap 1198559 TTATCGCCATCCTTT CCCTG GGC CAGGG CTTGCTATACGCATT TERM 1318 1198686 - 1198702 + G 72 -6.5 -4.28254 | GTATGATAAAACTTG GCAAGCA TTT TGCGTGC TTTTAAATATTAAAA guaA 1197394 - 1198929 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1319 1198938 - 1198986 + F 83 -8.6 -4.15788 | gap 1, opp_overlap 1198964 1198965, overlap 1198951 GGAATGATCCATTTT TTCTAGCTCTTATTTTTATTATA AAAT TTTTATAAAAATAAG-GCTAGAA TTTATTCAAGAAATT TERM 1320 1199144 - 1199124 - g 81 -2.5 -5.71983 | opp_overlap 1199124, overlap 1199127 GGAATGATAAAAAAA GTATGCCAA GTG TTGGTATGC TTGTGGAATTTAGAA C8J_1192 1199015 - 1200475 + | hypothetical protein C8J_1193 1200513 - 1200647 + | hypothetical protein purD 1200715 - 1201965 + | phosphoribosylamine--glycine ligase C8J_1195 1201962 - 1202414 + | hypothetical protein TERM 1321 1202426 - 1202440 + G 70 -8.6 -2.66272 | overlap 1202422 1202421 GTAAATTTTCCCTAT TGCTAG GAA CTAGCA TAGCTTTAAATGCAG C8J_1196 1202404 - 1204452 + | putative periplasmic protein pnp 1204522 - 1206681 + | polynucleotide phosphorylase/polyadenylase TERM 1322 1206723 - 1206748 + G 85 -8.5 -4.43477 | opp_overlap 1206723 CCTTTTTTTGACAAA GATTCTAAAAT CTTA ATTTTAGGATC TTTTCCTTCAGTAAA C8J_1198 1206678 - 1207160 + | hypothetical protein C8J_1199 1207218 - 1207316 + | hypothetical protein TERM 1323 1207440 - 1207424 - T 90 -5.1 -5.64304 | opp_overlap 1207424 CAAGACAAGAAAAAA GCTAGTT TAC ATCTAGC TTTTGCGTATTATCC C8J_1200 1208087 - 1207425 - | hypothetical protein C8J_1201 1209289 - 1208105 - | putative efflux pump TERM 1324 1208528 - 1208518 - G 88 -4 -5.75342 | overlap 1208521 TTGGTGCAAAAAAAA GATT GCT AATC CCATTTGCAGCCACC C8J_1202 1209343 - 1209798 + | low molecular weight phosphotyrosine protein phosphatase family protein TERM 1325 1209896 - 1209922 + F 100 -9.5 -4.93288 | opp_overlap 1209895 TCCTTAAAATTACAC GCCTAGCTTAA ATCCC TTTAGCTAGGC TTTTCTTTAGATGTT porA 1210050 - 1211300 + | major outer membrane protein TERM 1326 1211326 - 1211344 + T 100 -8.8 -5.66684 | opp_overlap 1211326 AGTTTAACTTTCAAA GGTGGGGT TTT ACTCCGCC TTTTTTTATGCCTTA TERM 1327 1211415 - 1211388 - T 95 -7.2 -5.38951 | gap 1 AATTTATATAAAAAA TTTTCCC-AAGCT AAA AGCTTTAGGAAAA TTAAGACTTAAACCA dnaJ-2 1212540 - 1211416 - | co-chaperone protein DnaJ racR 1212695 - 1213366 + | DNA-binding response regulator TERM 1328 1213692 - 1213718 + G 70 -6 -4.32049 | opp_overlap 1213692 AAAATATCATAGCAA TCTTTATTTTGA TGT TCAATGTAAAGA TTTTGATGGCTTATA racS 1213363 - 1214598 + | sensor histidine kinase recR 1214598 - 1215170 + | recombination protein RecR hydD 1215703 - 1215167 - | hydrogenase maturation protease HydD hydC 1216392 - 1215700 - | quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit hydB 1218118 - 1216403 - | quinone-reactive Ni/Fe-hydrogenase, large subunit hydA 1219260 - 1218121 - | quinone-reactive Ni/Fe-hydrogenase, small subunit C8J_1212 1221221 - 1219380 - | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 1329 1219951 - 1219940 - G 71 -3 -5.31275 | opp_overlap 1219940 TCTCATCATAAAAAA CAAA ATCT TTTG TATCTGCACCCATAG TERM 1330 1220578 - 1220590 + g 72 -2.7 -5.34555 | overlap 1220573 ATCATTTCTCTTTTT CTAAA ACC TTTGG TTTTTTCTACTCTAA amiA 1223197 - 1221218 - | N-acetylmuramoyl-L-alanine amidase C8J_1214 1224288 - 1223197 - | oxidoreductase, 2-nitropropane dioxygenase family tyrS 1225490 - 1224285 - | tyrosyl-tRNA synthetase TERM 1331 1224601 - 1224617 + g 76 -5.2 -5.07567 | opp_overlap 1224601 TCCGTAATCTCTAAA GCTAAA TTTTC TTTAGC TTTTTTAGGATGTAA spoT 1227697 - 1225502 - | RelA/SpoT family protein TERM 1332 1226698 - 1226711 + g 74 -5.3 -4.86731 | AAAGTGTGGTATGTA TGGTT TGAT AACCA TTTTGTTTAGGCAAG rpoZ 1227905 - 1227681 - | DNA-directed RNA polymerase subunit omega pyrH 1228635 - 1227916 - | uridylate kinase C8J_1219 1229880 - 1228687 - | peptidase, M23/M37 family TERM 1333 1229881 - 1229860 - G 100 -3.8 -6.32976 | AAAAAAACAAAAAAA GATAAGAA TATTTT TTCTCATC TTTTAACCTTAAACA C8J_1220 1230683 - 1229877 - | putative integral membrane protein lolD 1231335 - 1230670 - | lipoprotein releasing system ATP-binding protein LolD TERM 1334 1231026 - 1231010 - G 72 -8.1 -3.28791 | ACTTTTTTGCTATAA CCTTTAA TCA TTAAAGG CAACATAACATTTTT C8J_1222 1232583 - 1231405 - | tRNA (guanine-N(7))-methyltransferase TERM 1335 1231798 - 1231816 + g 71 -3.2 -5.252 | ATCTTCATATTTGCT TGAAATTT CTA AATTTTCA TTTTTTCTAAGACTA TERM 1336 1231968 - 1231978 + g 80 -6.8 -4.82901 | overlap 1231965 CTTTCCCAATAACTC GCCT ATG AGGC TTTTTATCCCAAGGA TERM 1337 1232415 - 1232433 + g 77 -4.6 -5.21709 | opp_overlap 1232418, overlap 1232416 GTTTATCGCCTTTAA TCACAAAA CCA TTTTGTGC TTTTTTAATCTGCAG TERM 1338 1232416 - 1232432 + g 77 -8.1 -3.72302 | opp_overlap 1232418, overlap 1232415 TTTATCGCCTTTAAT CACAAAA CCA TTTTGTG CTTTTTTAATCTGCA C8J_1223 1233815 - 1232583 - | fibronectin type III domain-containing protein TERM 1339 1233401 - 1233427 + gr 78 -10.2 -2.63257 | opp_overlap 1233400 1233404, overlap 1233406 1233418 1233418 CAGCTTGAACAAAAG GAACAGCTTCAA GTC TTGGAGCTGTGC TCACTTCTATAACCT TERM 1340 1233424 - 1233404 - GR 79 -8.3 -3.82261 | opp_overlap 1233401 1233406 1233418 1233418, overlap 1233400 CTTGAACAAAAGGAA CAGCTTCAA GTC TTGGAGCTG TGCTCACTTCTATAA C8J_1224 1234731 - 1233763 - | putative ribosomal pseudouridine synthase C8J_1225 1234809 - 1235909 + | rod shape-determining protein RodA, putative TERM 1341 1236005 - 1235991 - f 70 -7.8 -3.25942 | opp_overlap 1235991 AGTTGGTTAGAGCAA CCGGCT CAT AACCGG TTGGTCGCAGGTTCG TERM 1342 1236705 - 1236718 + G 78 -6.7 -4.57205 | overlap 1236704 GAGTCTTTATTTTAT CCATC AATG GATGG TTTATTTAAATTTTT ktrB 1236363 - 1237706 + | potassium uptake protein, TrkH family ktrA 1237717 - 1238367 + | putative K+ uptake protein TERM 1343 1238378 - 1238413 + T 78 -3.4 -5.68438 | gap 1, opp_overlap 1238368 1238380, overlap 1238380 ACTAAGCAAGATTTA AAGCCTTGCAAGCCTTT ACA AAACGCTT-TAAGGCTG TTTTTTCTTTGGTAG TERM 1344 1238380 - 1238411 + T 71 -6 -4.47052 | gap 1, opp_overlap 1238368 1238380, overlap 1238378 TAAGCAAGATTTAAA GCCTTGCAAGCCTTT ACA AAACGCTT-TAAGGC TGTTTTTTCTTTGGT C8J_1228 1239035 - 1238364 - | hypothetical protein TERM 1345 1239046 - 1239060 + r 71 -8.6 -2.95774 | opp_overlap 1239036 1239033 1239046, overlap 1239036 1239048 ATCATCTCTTTTAAA GAGTGT TAA ACACTC TATCTCCTGCATCTC TERM 1346 1239060 - 1239046 - R 77 -8.6 -3.5393 | opp_overlap 1239036 1239046 1239048, overlap 1239036 1239033 ATCATCTCTTTTAAA GAGTGT TAA ACACTC TATCTCCTGCATCTC upp 1239667 - 1239041 - | uracil phosphoribosyltransferase TERM 1347 1239568 - 1239555 - G 86 -5.3 -5.54079 | overlap 1239528 TCAAAAAGCAAAAAA GATGA AATT TCATC GATTAACATACGAAA C8J_1230 1240899 - 1239664 - | NADP-dependent malic enzyme, truncation TERM 1348 1239820 - 1239834 + g 72 -4.3 -5.0133 | TCCAAATTCTAAAGT GCTTA AATTA TAAGC TTTTTTAACCGCATC gltX2 1242292 - 1240901 - | glutamyl-tRNA synthetase C8J_1232 1242357 - 1243172 + | hypothetical protein TERM 1349 1243182 - 1243213 + T 90 -11.9 -3.07344 | opp_overlap 1243176 1243182 1243188, overlap 1243188 AGATAAAAATTACAA TTAAAATTTCCCT TATAAT AGGGAAATTTTAA TGTCTTGCAAGATAA TERM 1350 1243213 - 1243182 - T 95 -11.9 -3.79689 | opp_overlap 1243182 1243188, overlap 1243176 1243188 AGATAAAAATTACAA TTAAAATTTCCCT TATAAT AGGGAAATTTTAA TGTCTTGCAAGATAA TERM 1351 1243207 - 1243188 - T 74 -6.5 -4.53685 | opp_overlap 1243182 1243188, overlap 1243182 1243176 AAATTACAATTAAAA TTTCCCT TATAAT AGGGAAA TTTTAATGTCTTGCA TERM 1352 1243188 - 1243207 + T 74 -6.5 -4.43213 | opp_overlap 1243188 1243182 1243176, overlap 1243182 AAATTACAATTAAAA TTTCCCT TATAAT AGGGAAA TTTTAATGTCTTGCA accC-2 1244541 - 1243210 - | biotin carboxylase accB 1244998 - 1244543 - | acetyl-CoA carboxylase biotin carboxyl carrier protein TERM 1353 1244728 - 1244718 - G 76 -6.8 -4.38712 | CCTACTTTTACAAAA GGTG CTG CACC TGGGCTTGGAGCTTG TERM 1354 1245215 - 1245191 - g 71 -7.9 -3.43689 | overlap 1245182 1245206 AAAATGGCATTAGAA CGCAAGATGAT CGA ACCATTTTGCG AAGCAAATATAGGAA TERM 1355 1245690 - 1245656 - g 81 -3.6 -5.59879 | gap 1, overlap 1245675 1245676 TATAAAGATAAAAAA GGCAAGTATCAAGCC CAAACT GGCATAAC-CTTGCC AAGAATTTTAAAATA C8J_1235 1245146 - 1245706 + | deoxycytidine triphosphate deaminase TERM 1356 1246203 - 1246172 - g 82 -8.9 -3.90588 | gap 1, overlap 1246173 TACGGCGCAACCAAA CTTGCAAGCGACAA GCTTT TTGTCGC-TGCAAA CAATATAGCAGGTAA TERM 1357 1246202 - 1246173 - g 79 -10.2 -2.94032 | gap 1, overlap 1246172 ACGGCGCAACCAAAC TTGCAAGCGACAA GCTTT TTGTCGC-TGCAA ACAATATAGCAGGTA C8J_1236 1245755 - 1246759 + | polysaccharide biosynthesis protein C8J_1237 1246761 - 1247891 + | DegT family aminotransferase C8J_1238 1247884 - 1249194 + | hypothetical protein TERM 1358 1249723 - 1249699 - g 76 -3.7 -5.4833 | TTATCGAAGAAAAAA TTAAAGTACCT TAT AGATATTTTAA GGAGTTTAAAGGTAA C8J_1239 1249191 - 1249976 + | hypothetical protein C8J_1240 1249977 - 1251485 + | amino acid adenylation domain protein TERM 1359 1251988 - 1251976 - g 95 -7.7 -5.34555 | GGATATCACAAAAAA TTGGC TTT GCCAA ATGAAGGTTATTTAG C8J_1241 1251472 - 1252194 + | hypothetical protein C8J_1242 1252196 - 1252432 + | hypothetical protein C8J_1243 1253636 - 1252425 - | hypothetical protein neuA2 1253728 - 1254426 + | acylneuraminate cytidylyltransferase TERM 1360 1254517 - 1254529 + G 72 -7.7 -3.56844 | AAGTTTTGCTTGTTT GCCTT TAA AAGGC TCTTTGATTGATGAA TERM 1361 1255199 - 1255184 - g 71 -3.2 -5.30199 | overlap 1255187 AAAAATCAAGAAAAA CTAGCC AATT GGTTAG CTCAAAAAGGCTATG C8J_1245 1254410 - 1255234 + | flagellar protein C8J_1246 1255231 - 1255749 + | GNAT family acetyltransferase C8J_1247 1255819 - 1256328 + | hypothetical protein C8J_1248 1257039 - 1256293 - | imidazoleglycerol phosphate synthase, cyclase subunit TERM 1362 1256544 - 1256559 + g 86 -3.2 -5.94597 | opp_overlap 1256544 CCACAGAAGTTAAAA GAAGCT CTCC AGCTCC TTTTTTTTCATATTC hisH-1 1257645 - 1257040 - | imidazole glycerol phosphate synthase subunit HisH TERM 1363 1257413 - 1257423 + g 91 -5.4 -5.75342 | opp_overlap 1257413 ATTCCCAAACAAATG CCTA AAA TAGG TTTTTTTTGCACCAA C8J_1250 1258778 - 1257642 - | flagellin modification protein, PseA TERM 1364 1258839 - 1258897 + H 83 -8 -4.38472 | opp_overlap 1258860 1258863 1258879 1258883, overlap 1258846 1258876 TTTATTTTATAATTT TATGTATTTATATTATATAAATATTCAA AAT TTGAGTAAATATATAATATAATTATATA TTATTTTAGTTTAGG TERM 1365 1258846 - 1258890 + H 79 -8.3 -3.82525 | opp_overlap 1258860 1258863 1258879 1258883, overlap 1258839 1258876 TATAATTTTATGTAT TTATATTATATAAATATTCAA AAT TTGAGTAAATATATAATATAA TTATATATTATTTTA neuB 1258938 - 1259969 + | N-acetylneuraminic acid synthetase TERM 1366 1261212 - 1261190 - g 80 -6.4 -4.9218 | TATGGAGGAGAAAAA CAAGTAAG AACTCAA CTTACTTG GAACTTATTCCGACA C8J_1252 1259966 - 1261816 + | hypothetical protein TERM 1367 1262978 - 1262942 - g 70 -8.3 -3.15027 | opp_overlap 1262942, overlap 1262941 1262958 ACTGGTTAGCAAAAT TCTTATCTCATAAAAAT ATA ATTTTTATAGGACAAGA TTTAGCTTACAGCAA C8J_1253 1261837 - 1263801 + | hypothetical protein TERM 1368 1263975 - 1263957 - g 86 -3.2 -5.85178 | AACATTTAAAAAAAA TTTATCAA AAT CCGATAAA AGAACTTGAAGAAAA TERM 1369 1265234 - 1265221 - g 78 -3.1 -5.53079 | overlap 1265223 AAAAGATATAAAAAA GCCTT TAAA AAAGC TAAAGAAAAAAACAA C8J_1254 1263788 - 1265686 + | hypothetical protein TERM 1370 1265712 - 1265689 - T 100 -12.6 -4.28432 | opp_overlap 1265694 1265706 AAGCTTAATCTAAAA CTAAAGAGCA AAAT TGCTCTTTAG AAAGATTATTGTAAT C8J_1255 1267448 - 1265718 - | flagellin TERM 1371 1267168 - 1267186 + g 72 -4.6 -4.90869 | overlap 1267169 GCTTGAGTAGCTTTA GTCTTGAT AGT ATCAAGAA TTTTTAATTGCTCAT TERM 1372 1267169 - 1267185 + g 73 -8.1 -3.53437 | overlap 1267168 CTTGAGTAGCTTTAG TCTTGAT AGT ATCAAGA ATTTTTAATTGCTCA TERM 1373 1267544 - 1267563 + r 72 -7.9 -3.35695 | opp_overlap 1267544 GCTTATAAATAAAAA GCCTAGT ATTTAA ACTAGGC TTGGATTTGTATAAA TERM 1374 1267563 - 1267544 - R 100 -7.9 -5.38054 | opp_overlap 1267544 GCTTATAAATAAAAA GCCTAGT ATTTAA ACTAGGC TTGGATTTGTATAAA C8J_1256 1269352 - 1267622 - | flagellin TERM 1375 1269072 - 1269090 + g 72 -4.6 -4.90869 | overlap 1269073 GCTTGAGTAGCTTTA GTCTTGAT AGT ATCAAGAA TTTTTAATTGCTCAT TERM 1376 1269073 - 1269089 + g 73 -8.1 -3.53437 | overlap 1269072 CTTGAGTAGCTTTAG TCTTGAT AGT ATCAAGA ATTTTTAATTGCTCA C8J_1257 1271261 - 1269435 - | hypothetical protein TERM 1377 1269821 - 1269790 - G 83 -10.4 -3.53012 | opp_overlap 1269801 1269813 TTTTCCCTTTTGAAA GTTGCTAAAATTTT ATTT AAAATTTTAGCACC ACGATTGGTTGTTAA TERM 1378 1270509 - 1270493 - G 71 -2.3 -5.49569 | opp_overlap 1270493, overlap 1270484 CATCAACACAAAAAA TCACAAA TTT TTTTTGA TATTGCCTTAATAAT TERM 1379 1270841 - 1270855 + g 80 -2.2 -5.80817 | GGTCAAAAAGTATTC TAAGTT GTA AATTTA TTTTTTTCTCTTGAA C8J_1258 1272518 - 1271271 - | hypothetical protein C8J_1259 1273033 - 1272518 - | transformation system protein C8J_1260 1274041 - 1273034 - | O-sialoglycoprotein endopeptidase TERM 1380 1273260 - 1273284 + g 85 -5.9 -5.43621 | opp_overlap 1273260 1273278 CCTACAACGCCAAAA TTTTTAAACTT ATA AAGATTAAAAA TTTTTTCTAATTTAT TERM 1381 1273284 - 1273260 - G 70 -5.9 -4.21936 | opp_overlap 1273260, overlap 1273278 CCTACAACGCCAAAA TTTTTAAACTT ATA AAGATTAAAAA TTTTTTCTAATTTAT C8J_1261 1275432 - 1274038 - | hypothetical protein dxr 1276504 - 1275434 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase cdsA 1277226 - 1276501 - | phosphatidate cytidylyltransferase TERM 1382 1277025 - 1277001 - G 71 -5.7 -4.43755 | overlap 1277017 ATAACAAAGCTAAAA TCCCAAAAAGC AAA GCTTTATGCGA TAAACTTCCCAAAAT TERM 1383 1277081 - 1277097 + g 70 -8.1 -3.05816 | opp_overlap 1277072 1277081 GAAATATTTTCTAAA GCAAAAA GTT TTTTTGC TTCACTAAAAGATAG TERM 1384 1277097 - 1277081 - G 74 -8.1 -3.58329 | opp_overlap 1277081, overlap 1277072 GAAATATTTTCTAAA GCAAAAA GTT TTTTTGC TTCACTAAAAGATAG TERM 1385 1277163 - 1277152 - G 74 -3 -5.35222 | overlap 1277141 AAAATTGATAAAAAA TTGA TCAA TCAA CGCGATAATAATAAT C8J_1264 1277573 - 1277235 - | hypothetical protein TERM 1386 1277491 - 1277507 + g 71 -8 -3.524 | overlap 1277473 GCAAAACCTTCTTTT GCAAGC TCATT GCTTGC TTGTGTAGCTGGATA C8J_1265 1278882 - 1277575 - | fibronectin/fibrinogen-binding protein TERM 1387 1277898 - 1277910 + g 70 -6.3 -4.08058 | overlap 1277898 AATAAAAATTTGCTA CAAGA TCT TCTTG TTTATGATCTTGATT TERM 1388 1278815 - 1278827 + g 72 -2.7 -5.44119 | TTGTCATTGATACGC TTGAT AAA ATCGA TTTTTTTAAACTGAG mobA 1278944 - 1279519 + | putative molybdopterin-guanine dinucleotide biosynthesis protein TERM 1389 1279751 - 1279738 - g 78 -3.1 -5.54403 | overlap 1279732 AAAAAAGAAGAAAAA CAAGA CTTT TCTCG CTTAGCTTTGGCTAA TERM 1390 1280175 - 1280187 + G 76 -3.5 -5.47159 | TGTATCTACGGCTAT TTTAT ATA ATAAA TTTTTATTTGTTCCA pldA 1279516 - 1280505 + | phospholipase A TERM 1391 1281323 - 1281333 + G 83 -6.8 -5.03715 | overlap 1281327 GTGATTGTAAGCGTT GGGA TTA TCCC TTTTTTAGGGCTAAT ceuB 1280591 - 1281559 + | enterochelin transport system permease protein TERM 1392 1281697 - 1281714 + G 76 -6.3 -4.6526 | TAGTAGCTATTTGCA TCGCTGT TTCA ACAGTGA TTTTTCAAACTTTAT ceuC 1281552 - 1282490 + | enterochelin ABC transporter, permease protein ceuD 1282487 - 1283242 + | enterochelin transport system ATP-binding protein TERM 1393 1283275 - 1283287 + G 86 -3.4 -5.83822 | AAAATCTTTAGTTTT TGCA TTTTT TGCA TTTTTTTTAAGTCTA TERM 1394 1283598 - 1283588 - g 74 -5.4 -4.91473 | CAATTTAAAAACAAA CCTA GTG TAGG TGGAGTACAACAAGT ceuE 1283255 - 1284247 + | enterochelin transport system substrate-binding protein TERM 1395 1284257 - 1284275 + F 71 -6.7 -3.85704 | AAATAATATAACTTC GCAAGGG CTAGT CTCTTGC TTTAATACTTAATAA TERM 1396 1284333 - 1284345 + F 75 -3.3 -5.47218 | opp_overlap 1284333 AGTGGCGAACAGAGA GGGAT TTG AACCC TTTTTTTAAATAAAA C8J_1272 1284403 - 1284624 + | MGC82361 protein C8J_1273 1284625 - 1284906 + | hypothetical protein TERM 1397 1284883 - 1284913 + T 80 -4.2 -5.55855 | GTGATTTTAGGCATA TATAAAAGTAATCT TTG GGATTGATTTTATA TTTTATTTTTTTAGA TERM 1398 1285159 - 1285181 + T 77 -8.4 -3.54424 | overlap 1285162 GAGACCCGTTAAGAT CTGCACCCTT AGC AGGGGTGTGG TTTCAGCCGCTCACC TERM 1399 1285162 - 1285178 + T 71 -8.7 -2.90813 | overlap 1285159 ACCCGTTAAGATCTG CACCCTT AGC AGGGGTG TGGTTTCAGCCGCTC TERM 1400 1285268 - 1285240 - T 72 -3.1 -5.29742 | overlap 1285243 1285245 ATACAAAAAAATAAA TAATACCTAGCTT AAA AAGCTAGGAAAAA TCAAAGGCTAAGATA TERM 1401 1285265 - 1285243 - T 91 -9.2 -4.65305 | overlap 1285240 1285245 CAAAAAAATAAATAA TACCTAGCTT AAA AAGCTAGGAA AAATCAAAGGCTAAG TERM 1402 1285263 - 1285245 - T 100 -11.8 -3.8648 | overlap 1285243 1285240 AAAAAATAAATAATA CCTAGCTT AAA AAGCTAGG AAAAATCAAAGGCTA C8J_1274 1285823 - 1285269 - | hypothetical protein TERM 1403 1285951 - 1285934 - R 100 -9.9 -5.67711 | CAAAGAAAAGAAAAA GCCCTAT GATT ATAGGGC TTAAGAATTATTTTT nrfA 1287791 - 1285959 - | cytochrome c552 TERM 1404 1286324 - 1286339 + g 72 -6.2 -4.28656 | overlap 1286315 TTTGAGCTTTACGAT GAAGTT CTAA AACTTC TTTTAGCTCTTCACT TERM 1405 1287671 - 1287658 - G 71 -2.3 -5.38326 | overlap 1287659 CTAAGCAAAGAAAAA TCAGC ATTT GCTGC AATGGCATTTTTATT C8J_1276 1288297 - 1287806 - | cytochrome c-type protein nrfH TERM 1406 1287910 - 1287929 + g 73 -5.8 -4.64334 | gap 1, opp_overlap 1287910 1287909 CTGTTTGAGCAAAAT CTGCATGAC AGC GT-ATGCAG TTTTCTTGCACCATT ppk 1288508 - 1290592 + | polyphosphate kinase TERM 1407 1290595 - 1290620 + T 75 -7.7 -4.17987 | opp_overlap 1290584 1290589 1290595, overlap 1290589 1290592 CAAAGAAAACTAAAA GTTTTTAGGGT TTTT ACTCTAAAGAC TTATTTACTTGTTTG TERM 1408 1290664 - 1290646 - T 100 -11.8 -5.24129 | GTTTGTTATAAAAAA GGGCTTTA AGA TAAAGCCC TAGGAGATTTCCCAT TERM 1409 1290724 - 1290692 - T 71 -5.9 -4.41158 | gap 1, opp_overlap 1290692, overlap 1290689 CATAGAAATAAACAA TCATTTCTAAA-CT ATAAAA AGATTTAGAAATGA TTTTTAAGATTAAAA TERM 1410 1290692 - 1290724 + T 73 -5.9 -4.66833 | gap 1, opp_overlap 1290692 1290689 CATAGAAATAAACAA TCATTTCTAAA-CT ATAAAA AGATTTAGAAATGA TTTTTAAGATTAAAA C8J_1278 1292989 - 1290734 - | hypothetical protein TERM 1411 1290937 - 1290951 + g 71 -8.6 -2.82516 | overlap 1290939 AGAAAGCATTATTTA CAGCTA GGT TAGCTG TGTAATCATCACCAC TERM 1412 1292968 - 1292978 + g 76 -5.4 -5.14163 | AGCTTAGCAATATCT TGCT CGA AGCA TTTTTCTTCATAAGT TERM 1413 1293440 - 1293420 - R 78 -9.8 -3.17723 | TCAGGCTCAACTGAA CTTACGCA GCTTT TGCGTAAG CAGGAGCGAATTTAA C8J_1279 1293963 - 1293553 - | hypothetical protein ruvB 1294054 - 1295061 + | Holliday junction DNA helicase B TERM 1414 1295127 - 1295138 + G 75 -4.4 -5.33848 | ATTTCTTTTGCTTTA CCTT TTTA AAGG TTTTTTACTTGTAAT amaA 1295065 - 1296108 + | hypothetical protein TERM 1415 1296128 - 1296109 - T 85 -10.8 -3.22106 | opp_overlap 1296109, overlap 1296104 AAGAATTTAATTTAA CTTGCCTT AAAA AAGGCAAG TTTTATGTTCTAGGC TERM 1416 1296109 - 1296128 + T 100 -10.8 -4.73682 | opp_overlap 1296109 1296104 AAGAATTTAATTTAA CTTGCCTT AAAA AAGGCAAG TTTTATGTTCTAGGC fumC 1297529 - 1296138 - | fumarate hydratase TERM 1417 1297636 - 1297663 + r 76 -7.8 -3.68302 | opp_overlap 1297635 1297638 GAAGTATTTGAAAGT TATGTGCAGTTT ATTT AAACTGCACGGA TTATTCGACTGTTAC glmS 1299460 - 1297664 - | D-fructose-6-phosphate amidotransferase TERM 1418 1297881 - 1297891 + g 78 -4 -5.45813 | CTAGCAATAAGCTCT TCAA CAT TTGA TTTTGTTTTTTCATA TERM 1419 1298575 - 1298561 - G 71 -8.6 -2.82834 | CATTGCAGCATGATA GCTTGT TCC ACAAGC ACAAAGCGTGATTTC C8J_1284 1301813 - 1299465 - | GlnD family protein C8J_1286 1301910 - 1301803 - | hypothetical protein C8J_1287 1301956 - 1303020 + | hypothetical protein C8J_1288 1303030 - 1304349 + | xanthine/uracil permease family protein C8J_1289 1304363 - 1304806 + | putative nucleotide phosphoribosyltransferase TERM 1420 1305079 - 1305113 + G 71 -6.7 -3.96705 | gap 2, opp_overlap 1305079 GAATTTATAAGATTA GGGGCAAG-AAATT-TC TTT GATAATTTACTTGCTCC TTTGCGTTTTGTAGG C8J_1290 1304851 - 1305549 + | lipoprotein, VacJ family C8J_1291 1305559 - 1306128 + | putative periplasmic protein TERM 1421 1308005 - 1307991 - g 72 -4.2 -5.08169 | opp_overlap 1307993, overlap 1307993 ATAGATCTTAAAAAA CAGCTC AAC GAGCTT GTAAAAAACGATGGA TERM 1422 1308003 - 1307993 - g 72 -6.8 -4.16351 | opp_overlap 1307993, overlap 1307991 AGATCTTAAAAAACA GCTC AAC GAGC TTGTAAAAAACGATG C8J_1292 1306128 - 1308599 + | hypothetical protein C8J_1293 1309232 - 1308630 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 1423 1308770 - 1308758 - G 72 -4.1 -5.06414 | overlap 1308743 CCTTTGGAATAAAAA GGCTA TCA TAACC AAAACCATTTTCACC TERM 1424 1309979 - 1309959 - g 70 -5.6 -4.29396 | opp_overlap 1309959 1309957, overlap 1309950 AATCACTCATGAAAA TGAAAAAA CTCCT TTTTTTCA TCTTATTAAACAAAA C8J_1294 1309399 - 1310700 + | multidrug resistance efflux transporter, putative TERM 1425 1310713 - 1310683 - T 81 -9.3 -3.65786 | gap 1, overlap 1310677 1310707 AAAGAAGAATTAGAA GGCAAAATTAAGAT CTAA ATCT-AATTTTGCC CCGCAAAACCCATTG C8J_1295 1312376 - 1310703 - | iron-sulfur cluster-binding domain-containing protein TERM 1426 1312246 - 1312259 + g 71 -3.1 -5.2197 | AAATTAATCTCAGGG GCATA AATT TGTGC TTTTTGATTTTTATC selA 1312454 - 1313776 + | selenocysteine synthase TERM 1427 1314084 - 1314100 + G 74 -6.7 -4.3534 | AATTTTAAAAATTCT TGATATT AAA AATATCA TTTTAGTGCTTAGCA TERM 1428 1315454 - 1315443 - g 71 -3 -5.19261 | AAATTTATTAAAAAA TCAA AGTC TTGA TGTGCAAAGTATGAA selB 1313773 - 1315578 + | selenocysteine-specific elongation factor TERM 1429 1315968 - 1315953 - g 71 -3.3 -5.28826 | AAATTTTACAAAAAA TGCTA AAGCTG TAGCA CAAAAAGAAACCATG C8J_1298 1315627 - 1316337 + | hypothetical protein TERM 1430 1316345 - 1316369 + G 73 -3.7 -5.252 | TTAAATAAACCTAAT GTCTAAAATTA CTT TAATTTTAAGC TTTTTTATAGCACTC TERM 1431 1316781 - 1316770 - g 72 -4.4 -5.06103 | ACAATTCTCAAAAAA CAAG TCTT CTTG CAAGAACAGCTTATC C8J_1299 1316343 - 1316873 + | putative lipoprotein TERM 1432 1316884 - 1316905 + T 75 -7.4 -4.16921 | opp_overlap 1316879 1316884 TTTAAGAAAAGACAA TCAAGAGT ATAAAA ACTCTTGA TTTTAAGAATTATTA TERM 1433 1316905 - 1316884 - T 75 -7.4 -4.0865 | opp_overlap 1316884, overlap 1316879 TTTAAGAAAAGACAA TCAAGAGT ATAAAA ACTCTTGA TTTTAAGAATTATTA fldA 1317409 - 1316918 - | flavodoxin FldA C8J_1301 1318104 - 1317409 - | hypothetical protein C8J_1302 1318421 - 1318107 - | hypothetical protein TERM 1434 1319396 - 1319406 + G 70 -5.4 -4.54727 | GATATAGAAAAACTT GGAT TTA ATCC TTTTGATTTAACAAA katA 1318592 - 1320016 + | catalase TERM 1435 1320053 - 1320014 - f 74 -5.3 -4.86033 | gap 1, opp_overlap 1320017, overlap 1320018 AAAGCTTTAGAAAAA TAATTTTTA-CTTGCCAC TTTTG GTGGCAAACTAAAGATTA TAATAATTAAGGAAA C8J_1304 1320073 - 1320543 + | ankyrin repeat protein TERM 1436 1320520 - 1320543 + T 70 -5.5 -4.68528 | opp_overlap 1320518 1320520 ACGAGCCTAAAAATA CTAAAATTT ATCAAA AAATTTTAG TTATTTTTTAAATTT C8J_1305 1321200 - 1320544 - | hypothetical protein TERM 1437 1321236 - 1321222 - H 78 -4.4 -5.4505 | opp_overlap 1321222 GCCTTCAATAAAAAA TTAATA TAA TATTAA ATTCTACTCTTTATA C8J_1306 1321368 - 1321730 + | hypothetical protein C8J_1307 1321734 - 1323173 + | hypothetical protein metC 1323186 - 1324349 + | cystathionine beta-lyase TERM 1438 1324406 - 1324428 + G 88 -7.7 -5.00616 | overlap 1324408 ACTAGCAGACTCATG GAGCACGCA GGAAA TGCGTGCTA TTTTTTGCGAACAAA TERM 1439 1324408 - 1324426 + G 95 -10.3 -4.13561 | overlap 1324406 TAGCAGACTCATGGA GCACGCA GGAAA TGCGTGC TATTTTTTGCGAACA purB-2 1324359 - 1325726 + | adenylosuccinate lyase TERM 1440 1326984 - 1326971 - g 70 -5.3 -4.56133 | TTTGAAGAATTAAAA GCTAA ATTT TTAGC CAATGCACAAATTTA TERM 1441 1327051 - 1327026 - g 78 -6.3 -4.75309 | CTAAAGCTAACAAAA TTCTAGATCAA ATCA TCAATCTAGAA AATTTAAACCACTTT C8J_1310 1325735 - 1327075 + | MmgE/PrpD family protein TERM 1442 1327080 - 1327106 + F 95 -11.1 -3.95042 | opp_overlap 1327079 1327077 1327080 1327104 TTTCTTTTTAAATAT TTATCCTTCTT TTTAC AAGAAGGATAA TTTCATTACACTTTT TERM 1443 1327106 - 1327080 - f 83 -11.1 -2.60496 | opp_overlap 1327080, overlap 1327079 1327077 1327104 TTTCTTTTTAAATAT TTATCCTTCTT TTTAC AAGAAGGATAA TTTCATTACACTTTT C8J_1311 1327157 - 1327381 + | hypothetical protein TERM 1444 1327625 - 1327592 - g 76 -2.7 -5.64873 | gap 1, opp_overlap 1327598 GCGAAGAAGAAAAAA TCACACGTCATTTT TTAAATC AAAATGAC-TATGA TGTTATTGTTAATGT TERM 1445 1328660 - 1328672 + G 77 -7.7 -4.18782 | overlap 1328662 TGCCAAAATATCGTA TGCCA AAT TGGCA TTTAGTTTGGTTTAT feoB 1327378 - 1329219 + | ferrous iron transport protein hydA2 1330709 - 1329216 - | hydrogenase, (NiFe)/(NiFeSe) small subunit family fabI 1331537 - 1330713 - | enoyl-(acyl carrier protein) reductase tpiA 1332212 - 1331541 - | triosephosphate isomerase pgk 1333411 - 1332209 - | phosphoglycerate kinase TERM 1446 1332636 - 1332654 + g 80 -6.8 -4.74539 | opp_overlap 1332636 ATTTTCACTCCTAAA TTTTTACC CTT GGTAAGAA TTTTATTAGCTTCTT gapA 1334412 - 1333414 - | glyceraldehyde 3-phosphate dehydrogenase A C8J_1318 1334472 - 1335017 + | nicotinate-nucleotide adenylyltransferase C8J_1319 1335045 - 1335371 + | hypothetical protein C8J_1320 1335779 - 1335402 - | hypothetical protein algC 1337197 - 1335827 - | phosphomannomutase/phosphoglucomutase fliL 1337320 - 1337856 + | flagellar basal body-associated protein FliL acpS 1337856 - 1338203 + | 4'-phosphopantetheinyl transferase TERM 1447 1338178 - 1338198 + T 100 -12.7 -4.21737 | overlap 1338173 1338170 ATGATAATGGTTTTG CTATAGCCA TAG TGGCTATAG TTTGATTATTTTCCT C8J_1324 1338623 - 1338204 - | hypothetical protein C8J_1325 1339981 - 1338620 - | cytochrome P450 family protein C8J_1326 1341099 - 1339978 - | hypothetical protein kpsS 1342356 - 1341172 - | capsule polysaccharide export protein KpsS C8J_1328 1343468 - 1342353 - | hypothetical protein TERM 1448 1343388 - 1343378 - G 76 -2.6 -5.55698 | opp_overlap 1343378 TAGAATTTAAAAAAA TAAT TTC ATTA TCTTTGGCCTTAAAA C8J_1329 1344705 - 1343650 - | hypothetical protein C8J_1330 1345894 - 1344698 - | hypothetical protein TERM 1449 1345615 - 1345605 - G 76 -5.4 -5.10033 | CTAAGAGAAACAAAA CCTA AAA TAGG AATTTCAAAAGTATA C8J_1331 1346427 - 1345894 - | hypothetical protein C8J_1332 1347325 - 1346540 - | hypothetical protein C8J_1333 1348513 - 1347329 - | hypothetical protein TERM 1450 1347622 - 1347635 + g 76 -5.3 -5.14563 | opp_overlap 1347622 1347628 ATATAGTCGCACAGA TGACA ATTA TGTCA TTTTTTGCTAAAAAG C8J_1334 1349179 - 1348646 - | hypothetical protein C8J_1335 1350153 - 1349206 - | hypothetical protein C8J_1336 1351541 - 1350150 - | hypothetical protein TERM 1451 1350902 - 1350916 + g 85 -2.1 -6.0427 | TCCAAGATTCAATTG CTTCT AACGA AGGAG TTTTTTTTATCTCAT TERM 1452 1351110 - 1351099 - G 71 -3 -5.18357 | GAATGTATTAAAAAA TGAA ATTT TTCA TGCTCATTTCCATCA C8J_1337 1352425 - 1351559 - | hypothetical protein C8J_1338 1353650 - 1352529 - | hypothetical protein TERM 1453 1353582 - 1353549 - G 81 -9.7 -3.53224 | opp_overlap 1353558 CATTCCTGTTGCAAA GATGCAAAGCTCAAA TTCG CTTGAGTTTTGCACC CTGTACATTAAAGAT C8J_1339 1354687 - 1353647 - | hypothetical protein C8J_1340 1356681 - 1354687 - | hypothetical protein C8J_1341 1359053 - 1356678 - | hypothetical protein TERM 1454 1357600 - 1357618 + g 70 -6.2 -4.11216 | opp_overlap 1357599 TCTAAATAAATTATC TTTTTAAA TTC TTTAAAAA TTTTAGGAATAAAAA C8J_1342 1360242 - 1359040 - | hypothetical protein C8J_1343 1361354 - 1360239 - | hypothetical protein C8J_1344 1362330 - 1361356 - | hypothetical protein C8J_1345 1363625 - 1362327 - | hypothetical protein TERM 1455 1362960 - 1362976 + g 74 -6.7 -4.25104 | ACAAAAATTTGCCAT TTCATTA ATA TAATGAA TTTTAATAGCCAAAA TERM 1456 1363516 - 1363526 + g 72 -4 -5.08178 | opp_overlap 1363516 CCATCATTTAAAGCA TCAA TTT TTGA TTTTTCTCTATCTAT C8J_1346 1364674 - 1363631 - | hypothetical protein C8J_1347 1366124 - 1364727 - | hypothetical protein C8J_1348 1367157 - 1366114 - | hypothetical protein C8J_1349 1368134 - 1367157 - | hypothetical protein kpsF 1369082 - 1368135 - | arabinose-5-phosphate isomerase kpsD 1370751 - 1369093 - | capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein TERM 1457 1369383 - 1369355 - G 78 -6.7 -4.62984 | TTATCATACACAAAA GCTCCAGGTAAAG AAA CCTCACCTTGAAC TATGATGAGATTATT kpsE 1371871 - 1370753 - | capsular polysaccharide ABC transporter TERM 1458 1370955 - 1370965 + g 70 -5.4 -4.56775 | opp_overlap 1370943 TAAGCTTTTAAAGCT GCTT CAT AAGC TTTTTGCGCAAAAGT kpsT 1372533 - 1371871 - | capsular polysaccharide ABC transporter, ATP-binding protein TERM 1459 1372077 - 1372055 - G 77 -7.7 -4.07568 | opp_overlap 1372055 CTTTTTTCCCTAAAA GCAGGATCT CCAAC AGCTCCTGC TTCATCAATCAAATA kpsM 1373312 - 1372530 - | capsular polysaccharide ABC transporter, permease protein TERM 1460 1372676 - 1372666 - G 72 -2.6 -5.43866 | overlap 1372651 TAATTTTCAAAAAAA TTAA ATC TTAA AAGTTCAAAAATATG TERM 1461 1373114 - 1373104 - G 95 -6.8 -5.88197 | CTAAACATAAAAAAA GGCA TAA TGCC TGAAATCAAAAACAT C8J_1355 1373791 - 1373384 - | hypothetical protein TERM 1462 1374334 - 1374322 - g 71 -3.4 -5.27399 | opp_overlap 1374322 GAAGATAGCAAAAAA CTTC TTGAT GAAG TTTTAGAACAAATGA C8J_1356 1373866 - 1374429 + | hypothetical protein dut 1374466 - 1375155 + | deoxyuridine triphosphatase domain protein TERM 1463 1375502 - 1375484 - g 74 -5.4 -4.95957 | GAAATCAACCAAAAA TATTACCA TTA TGATAATA CAAACGAAGTTTCAA C8J_1358 1375157 - 1375870 + | hypothetical protein C8J_1359 1376818 - 1375853 - | hypothetical protein TERM 1464 1376350 - 1376337 - G 74 -5.3 -5.00616 | opp_overlap 1376337, overlap 1376319 TTTTCTTTTAAAAAA GATGA AATT TCATC TTTACTTATAAAGAG TERM 1465 1376566 - 1376584 + g 77 -9 -3.55815 | AATCTCTGGCTTTTT TTTCAAAG TTA CTTTGAAA TTTAGGAGCGTGTTT TERM 1466 1376597 - 1376607 + g 76 -2.6 -5.63504 | AAATTTAGGAGCGTG TTTT ATG AAAA TTTTTTTATGAAATT TERM 1467 1376799 - 1376773 - G 77 -9.6 -2.9045 | opp_overlap 1376765 1376773, overlap 1376772 AAAAAGCGAGTAAAT TTTTACCCCTTT TTA AAAGGGCTAAAA TTTCATCTTTAATTT TERM 1468 1376773 - 1376799 + g 91 -9.6 -4.05229 | opp_overlap 1376773 1376772, overlap 1376765 AAAAAGCGAGTAAAT TTTTACCCCTTT TTA AAAGGGCTAAAA TTTCATCTTTAATTT C8J_1360 1378127 - 1376808 - | MiaB-like tRNA modifying protein TERM 1469 1377771 - 1377790 + g 74 -2.2 -5.50499 | ACTTTGCAAATAAGT CGAATTTG AAAA TAAATTTG TTTTTTTAAGTATCA prfB 1378201 - 1379298 + | peptide chain release factor 2 TERM 1470 1379354 - 1379374 + T 74 -5.3 -4.90381 | opp_overlap 1379353 1379355 1379357, overlap 1379357 AAAAGAATTAGAAAG ATAGCGGGA ATT TCCCGCTTG TTTTATTATCTTGCA TERM 1471 1379373 - 1379355 - T 81 -8.8 -3.66867 | opp_overlap 1379354 1379357, overlap 1379353 1379357 AAAGAATTAGAAAGA TAGCGGGA ATT TCCCGCTT GTTTTATTATCTTGC TERM 1472 1379371 - 1379357 - T 87 -11.4 -3.39017 | opp_overlap 1379354 1379357, overlap 1379355 1379353 AGAATTAGAAAGATA GCGGGA ATT TCCCGC TTGTTTTATTATCTT TERM 1473 1379357 - 1379371 + T 95 -11.4 -4.53142 | opp_overlap 1379357 1379355 1379353, overlap 1379354 AGAATTAGAAAGATA GCGGGA ATT TCCCGC TTGTTTTATTATCTT C8J_1362 1379772 - 1379380 - | hypothetical protein C8J_1363 1381008 - 1379890 - | tRNA pseudouridine synthase D TERM 1474 1380231 - 1380212 - GR 82 -5 -5.36441 | TCCTCACATAAAAAA CATTTTCC AAAA GGATAATG CCCTAAAACCTCACC C8J_1364 1381798 - 1380977 - | thiamine monophosphate kinase TERM 1475 1381867 - 1381851 - H 74 -5.3 -4.87786 | opp_overlap 1381851 TGAATTTTAGAAAAA TTTTATA TAA TATAAAA ATATTTAAGGAAAAA C8J_1365 1381885 - 1382958 + | hypothetical protein C8J_1366 1382955 - 1383338 + | hypothetical protein TERM 1476 1383397 - 1383383 - g 73 -3.6 -5.33848 | ATCACAATGAAAAAA GAAAAA AAT TTCTTC AAAAACAAGAAATTA C8J_1367 1383331 - 1384014 + | DNA methylase flgI 1384073 - 1385119 + | flagellar basal body P-ring protein TERM 1477 1385274 - 1385286 + G 88 -4.1 -5.75342 | opp_overlap 1385254, overlap 1385254 AAAAGAACAAACGGA TGCTT TTG AGGCA TTTTTTTTAAAGCAA C8J_1369 1385152 - 1385460 + | hypothetical protein C8J_1370 1385523 - 1385720 + | hypothetical protein C8J_1371 1385765 - 1386199 + | hypothetical protein C8J_1372 1386209 - 1388035 + | flagellar hook-associated protein FlgK TERM 1478 1388018 - 1388042 + F 88 -12.3 -2.63596 | opp_overlap 1388005, overlap 1388023 ATGCTTGATACCTTA CTAGGGCTTAA ATC TTAAGCTCTAG TAATATCAAATGAAA TERM 1479 1388466 - 1388488 + G 88 -5.7 -5.63517 | opp_overlap 1388459 1388466 ATCAAAACCTTAAAT TCATATTCA AGTTA TGGATATGA TTTTTTCTTTGGAAA C8J_1373 1388052 - 1388816 + | hypothetical protein TERM 1480 1388984 - 1388998 + G 83 -8.6 -4.18506 | opp_overlap 1388983 1388984 AGCAACAAACAAACT CCAAAG CGT CTTTGG TTCTTTTACAGCTAC TERM 1481 1388998 - 1388984 - g 70 -8.6 -2.63784 | opp_overlap 1388984, overlap 1388983 AGCAACAAACAAACT CCAAAG CGT CTTTGG TTCTTTTACAGCTAC C8J_1374 1388820 - 1389584 + | hypothetical protein ctsF 1390758 - 1389577 - | general secretory pathway protein F C8J_1376 1392302 - 1390755 - | general secretory pathway protein E TERM 1482 1391865 - 1391854 - G 74 -3 -5.4833 | TCATGTAATAAAAAA TCAA AAAT TTGA CTGATGCAACTTTGA TERM 1483 1391989 - 1392007 + g 70 -3.8 -5.02074 | GCTATCTTTAATTCA TCGGCAAT TGC AGTGTCGA TTTTTTCACAAATCA ctsX 1392891 - 1392304 - | transformation system protein TERM 1484 1392413 - 1392423 + g 74 -5.4 -4.93365 | TGAGCAAAAATCAGC CAAG AAT CTTG TTTTTGCTTGTCAAG C8J_1378 1393503 - 1392895 - | transformation system protein ctsD 1394908 - 1393496 - | general secretory pathway protein D TERM 1485 1394526 - 1394539 + g 81 -8.1 -4.05902 | overlap 1394530 CTTTGCCTTGGTTTA GCGTC TACA GACGC TTTAGTTATGCTTTG ctsR 1395182 - 1394886 - | transformation system protein C8J_1381 1398781 - 1395221 - | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 1486 1395280 - 1395292 + g 88 -5.5 -5.5074 | TAAGCTGTCTATAGC GACGT TGA GCGTC TTTTTTATTGCGTTC TERM 1487 1396861 - 1396897 + g 77 -4.6 -5.28942 | gap 1, opp_overlap 1396869 1396872, overlap 1396869 1396870 GTTTTACGATTTTTT CAACAAATTCAGTGCCT TTAT AGGCATTG-GTTTGTTC TTTTTCTTTAAGCTC TERM 1488 1396869 - 1396890 + g 82 -7.3 -4.8245 | opp_overlap 1396869 1396872, overlap 1396861 1396870 ATTTTTTCAACAAAT TCAGTGCCT TTAT AGGCATTGG TTTGTTCTTTTTCTT TERM 1489 1396870 - 1396889 + g 76 -8.6 -3.4581 | opp_overlap 1396869 1396872, overlap 1396869 1396861 TTTTTTCAACAAATT CAGTGCCT TTAT AGGCATTG GTTTGTTCTTTTTCT TERM 1490 1398739 - 1398723 - G 100 -10.9 -4.28361 | overlap 1398728 GCAACTTCAGTAAAA GCATACG CAG CGTATGC AGCAGCCTCATTTCC C8J_1382 1399515 - 1398874 - | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein TERM 1491 1399026 - 1399042 + g 72 -5.1 -4.77719 | overlap 1399027 TATCTAGTATTGTAT CGCCTAT CAT ATAGGCA TTTTCTTGAGTTTTA TERM 1492 1399027 - 1399041 + g 76 -8.6 -3.45005 | overlap 1399026 ATCTAGTATTGTATC GCCTAT CAT ATAGGC ATTTTCTTGAGTTTT TERM 1493 1399445 - 1399420 - G 93 -11.3 -3.23452 | gap 1, opp_overlap 1399416 1399427 ATTTTTAGAAGTTAA TCCAAGG-GCTT TAA AAGCTCCTTGGA AAGAATTTAAAATAG cadF 1400474 - 1399515 - | fibronectin-binding protein TERM 1494 1400591 - 1400575 - R 100 -12.3 -3.99917 | AAAAAATTGTAGAAA GGTGGGA AAA TCCCACC AAAAATATTAACGTT rpsI 1400988 - 1400599 - | 30S ribosomal protein S9 rplM 1401416 - 1400991 - | 50S ribosomal protein L13 TERM 1495 1401502 - 1401462 - R 75 -4.3 -5.26316 | opp_overlap 1401466 1401467, overlap 1401467 1401471 TGATTGTATAAAAAA TAATATTAATTTTTACTTA ATT TAAGTAAAAATAAAGTTTA TATTTCCAAAATTTG TERM 1496 1401467 - 1401497 + r 73 -8.6 -3.19232 | opp_overlap 1401462 1401467 1401471, overlap 1401466 GTATAAAAAATAATA TTAATTTTTACTTA ATT TAAGTAAAAATAAA GTTTATATTTCCAAA TERM 1497 1401497 - 1401467 - R 82 -8.6 -3.96386 | opp_overlap 1401467 1401466, overlap 1401462 1401471 GTATAAAAAATAATA TTAATTTTTACTTA ATT TAAGTAAAAATAAA GTTTATATTTCCAAA TERM 1498 1401493 - 1401471 - R 82 -9.4 -3.57601 | opp_overlap 1401467 1401466, overlap 1401467 1401462 AAAAAATAATATTAA TTTTTACTTA ATT TAAGTAAAAA TAAAGTTTATATTTC C8J_1386 1404265 - 1401500 - | ATP-dependent DNA helicase, UvrD/REP family TERM 1499 1402897 - 1402907 + g 74 -5.4 -5.011 | TGATTTCTTGGGCTT GGTT TTT AACC TTTTGTTCTTTAGAT C8J_1387 1406628 - 1404262 - | hypothetical protein TERM 1500 1406504 - 1406469 - G 70 -5.7 -4.25104 | gap 1, opp_overlap 1406474, overlap 1406475 CTTCTTGCATTAAAA GCAAACTTTCATAAGA ACTTG CCTTATGAAAATT-GC TCAAACAAACTTTAT C8J_1388 1407146 - 1406625 - | putative lipoprotein C8J_1389 1407735 - 1407133 - | hypothetical protein TERM 1501 1407388 - 1407376 - G 71 -7.7 -3.40622 | overlap 1407374 TATCGGCAAAATAGA TCCTG TTC CAGGA TAAGGACTAAGTACA C8J_1390 1407833 - 1407732 - | hypothetical protein C8J_1391 1408048 - 1407830 - | hypothetical protein ccoP 1408911 - 1408048 - | cytochrome c oxidase, cbb3-type, subunit III TERM 1502 1408561 - 1408579 + g 74 -5.4 -4.93595 | overlap 1408567 TTGACCCATTGCTAT TTTATCTT CAG GAGATAAA TTTTTAAATTTTTCT ccoQ 1409174 - 1408911 - | cytochrome c oxidase, cbb3-type, subunit IV TERM 1503 1409148 - 1409127 - G 83 -8.9 -4.05788 | overlap 1409137 TGTTGCTAAATCAAA TGTGATTAA ATTT TTAATCACA TCAAAAACTATTGAT ccoO 1409844 - 1409179 - | cytochrome c oxidase, cbb3-type, subunit II ccoN 1411323 - 1409857 - | cytochrome c oxidase, cbb3-type, subunit I TERM 1504 1411144 - 1411128 - G 70 -3.7 -5.1417 | GCATAAAACCAAAAA TCACACC TGA AGTATGA AGTGGTCTAAGTCTT TERM 1505 1411236 - 1411217 - G 75 -7.2 -4.14243 | TATGCCATTTGAAAA GCTATAAG AGTT CCTATAGC CATACCAACAATGCC C8J_1396 1412120 - 1411449 - | DNA-binding response regulator C8J_1397 1413334 - 1412123 - | putative two-component sensor TERM 1506 1413301 - 1413270 - G 100 -13.3 -2.73875 | opp_overlap 1413270, overlap 1413267 TTTCCTTGAACATCA GCTCTTGAAAAAA TTGTAT TTTTTTCAAGAGC TTTAAAAAACTGATC TERM 1507 1413270 - 1413301 + g 100 -13.3 -3.54741 | opp_overlap 1413270 1413267 TTTCCTTGAACATCA GCTCTTGAAAAAA TTGTAT TTTTTTCAAGAGC TTTAAAAAACTGATC C8J_1398 1413990 - 1413331 - | hypothetical protein carA 1415105 - 1413987 - | carbamoyl phosphate synthase small subunit TERM 1508 1414184 - 1414198 + g 77 -5.7 -4.9725 | AATTATGATTTTGTG CGGTA ATTTC TACCG TTTTTGTATCAAGAT C8J_1400 1415656 - 1415105 - | hypothetical protein TERM 1509 1415175 - 1415185 + g 71 -3.2 -5.22137 | TCGTATTCTTCGCTA CCTG GAA TAGG TTTTGTTTTATAATT C8J_1401 1416267 - 1415749 - | hypothetical protein C8J_1402 1416688 - 1416260 - | hypothetical protein TERM 1510 1416574 - 1416552 - G 74 -8.5 -3.6106 | opp_overlap 1416552 GGCAATACGCCTAAA CTTTCACAC TCTTG GCGTGAAAG TTCATAAGCTTTTTC purA 1417935 - 1416685 - | adenylosuccinate synthetase TERM 1511 1416972 - 1416954 - G 74 -8.2 -3.5485 | overlap 1416950 CATCTAAAACATCAA GCTTCATC AAA GATAAAGC ATCAAGACCATTAAG TERM 1512 1419085 - 1419109 + G 72 -2.7 -5.43974 | overlap 1419087 CAAACTCATAGAACT TTCTCCTGCTG TAG CTGTGGGAGCA TTTTTGTTTGGTTTT C8J_1404 1418201 - 1419640 + | putative inner membrane protein TERM 1513 1419629 - 1419652 + T 100 -12.6 -3.31515 | opp_overlap 1419629 1419634 1419646, overlap 1419618 1419634 CTAAGATTTTTAATA CAAAAGCCTT AAAA AAGGCTTTTG TTCTCAAAGCTCTTT TERM 1514 1419652 - 1419629 - T 100 -12.6 -3.06315 | opp_overlap 1419629 1419618 1419634, overlap 1419634 1419646 CTAAGATTTTTAATA CAAAAGCCTT AAAA AAGGCTTTTG TTCTCAAAGCTCTTT TERM 1515 1419634 - 1419647 + T 82 -6.7 -4.77165 | opp_overlap 1419629 1419634 1419646, overlap 1419629 1419618 ATTTTTAATACAAAA GCCTT AAAA AAGGC TTTTGTTCTCAAAGC TERM 1516 1419647 - 1419634 - T 78 -6.7 -4.66938 | opp_overlap 1419634 1419629 1419618, overlap 1419629 1419646 ATTTTTAATACAAAA GCCTT AAAA AAGGC TTTTGTTCTCAAAGC putP 1421125 - 1419656 - | sodium/proline permease TERM 1517 1419933 - 1419947 + g 70 -4.3 -4.87665 | opp_overlap 1419931 1419933 GCATAAGAAACTATA CTCAA AACAC TTGAG TTTTTATCAGTAGAA TERM 1518 1420436 - 1420452 + g 70 -5.9 -4.26463 | opp_overlap 1420436 TCCTTCGCCCATAGA TAAAGCT TGT GGCTTTA TTTCTCTTACTATAT C8J_1406 1424631 - 1421143 - | bifunctional PutA protein, putative selD 1425687 - 1424761 - | putative selenide,water dikinase C8J_1408 1426365 - 1425793 - | hypothetical protein TERM 1519 1426145 - 1426156 + g 83 -3 -5.75599 | opp_overlap 1426133, overlap 1426133 ATATTTACTTCACTA GAAT TAAA ATTC TTTTTTTGTACTTTG TERM 1520 1426356 - 1426344 - G 72 -6.3 -4.35483 | opp_overlap 1426343 1426344 GCTGAGGACAAGAAA GATTG CGA CAATC AATTTTCATTATTTT TERM 1521 1426458 - 1426471 + r 100 -6.7 -5.46629 | opp_overlap 1426453 1426458 AGAAAAAATTTAAAA GCTCA AAAA TGAGC TTTTTTTAAAATCTT TERM 1522 1426471 - 1426458 - R 76 -6.7 -4.55016 | opp_overlap 1426458, overlap 1426453 AGAAAAAATTTAAAA GCTCA AAAA TGAGC TTTTTTTAAAATCTT C8J_1409 1428579 - 1426477 - | methyl-accepting chemotaxis protein TERM 1523 1426786 - 1426804 + g 76 -8.9 -3.53012 | ATGTTCTCCAGCACG TGCAGCT TCAAT AGCTGCA TTTAAAGCAAGAAGA TERM 1524 1427054 - 1427068 + g 72 -4.2 -5.13137 | opp_overlap 1427049 TTAGCAAAATTTGAA GAAGCT ACA AGCATC TTTTTAATTTCTTTA TERM 1525 1427501 - 1427479 - G 70 -4.2 -4.95854 | TAAAAAACGGAAAAA TGATTCTAAA GAA CTAAGAATCA CAGGCAATCTAGATG TERM 1526 1428560 - 1428546 - G 76 -3.6 -5.36441 | overlap 1428551 TTGCCACAGAAAAAA TAAGTT TTA AACCTA TATTTAAAGATTTAA C8J_1410 1429429 - 1428692 - | ModE repressor domain protein fdhD 1430204 - 1429422 - | formate dehydrogenase accessory protein TERM 1527 1430271 - 1430249 - R 70 -2.1 -5.59357 | ATTATATCAAAAAAA CATAAATAA CAAAT TTATATATG GAAAAATAGATTTTA TERM 1528 1430366 - 1430339 - R 74 -7 -4.33739 | opp_overlap 1430364, overlap 1430340 1430342 CAAAAAAGCTTAAAA CTACCGCTATGC AATA ACATAGCGGTTA AAGATTAAATTTTTA TERM 1529 1430365 - 1430340 - R 73 -8.3 -3.18617 | opp_overlap 1430364, overlap 1430339 1430342 AAAAAAGCTTAAAAC TACCGCTATGC AATA ACATAGCGGTT AAAGATTAAATTTTT TERM 1530 1430363 - 1430342 - R 85 -10.9 -3.12962 | overlap 1430340 1430339 AAAAGCTTAAAACTA CCGCTATGC AATA ACATAGCGG TTAAAGATTAAATTT fdhC 1431303 - 1430371 - | formate dehydrogenase, cytochrome b subunit fdhB 1431941 - 1431300 - | formate dehydrogenase, iron-sulfur subunit C8J_1414 1434151 - 1431938 - | hypothetical protein TERM 1531 1433910 - 1433922 + g 76 -6.3 -4.67234 | GTATCTTCTAAACCT TCATC AAA GATGA TTTTTAGCATTCCAT C8J_1415 1434742 - 1434200 - | hypothetical protein C8J_1416 1434933 - 1434742 - | tat domain protein TERM 1532 1434843 - 1434860 + gr 75 -8.5 -3.40403 | CTTTTCTTTCTTCAT CTTTAGC TAGA GCTAAAG TTGTGCTACCAAGCA C8J_1417 1435621 - 1434908 - | hypothetical protein nspC 1437073 - 1435925 - | carboxynorspermidine decarboxylase TERM 1533 1436183 - 1436195 + g 71 -4.9 -4.74285 | GTTTTCTTTTAAGTC TGAAA TTT TTTCA TTTTCTCTTGTGGCT TERM 1534 1437391 - 1437377 - g 72 -6.4 -4.23999 | opp_overlap 1437377 TTAGATCCAAAACAA TTCCCC CAA GGAGAA ATTTTAAAAGCCTTG C8J_1419 1437197 - 1438738 + | oxidoreductase, putative C8J_1420 1438740 - 1438961 + | thiS family protein C8J_1421 1438962 - 1439408 + | molybdopterin converting factor, subunit 2 moeA2 1439412 - 1440602 + | putative molybdopterin biosynthesis protein cas2 1441792 - 1441361 - | CRISPR-associated Cas2 family protein cas1 1442675 - 1441785 - | CRISPR-associated Cas1 family protein C8J_1425 1445626 - 1442672 - | hypothetical protein TERM 1535 1442738 - 1442752 + g 71 -5.8 -4.43272 | opp_overlap 1442737, overlap 1442744 AAGTGCTGAAACTAT GTATTT TTC AAATAC TTTTAGATTTTGAAT TERM 1536 1444417 - 1444440 + g 73 -8.4 -3.43511 | opp_overlap 1444420, overlap 1444415 1444420 GCATTAAAGGAGTGA TAAGTTTTAA GGCT TTAAAACTTA TATTTAAATGGTCTT TERM 1537 1444983 - 1444948 - G 78 -9.2 -3.29109 | opp_overlap 1444937, overlap 1444937 1444964 AAAATGCTACACTAA GCACTTCTTCTTCAAA TTTC TTTGAAAAAGAAAAGC CAAATTCTCTTTGTT TERM 1538 1445040 - 1445058 + g 77 -4.6 -5.26158 | overlap 1445039 TTTAAAAAACTTTGC GTTATGCA GCG TTCATAAC TTTCTTTTTTATTTC TERM 1539 1445434 - 1445457 + g 72 -8.2 -3.2362 | overlap 1445438 1445445 GTTTTAAGTGATTTA GCCTTGCT TTGCGTCT AGCAAGGC GTTTTCTGGCACTTC TERM 1540 1446139 - 1446149 + G 76 -5.4 -5.02074 | CATATCAATGCTTCG GCAA AAC TTGC TTTTTTGGCAAATAA C8J_1426 1445833 - 1447290 + | hypothetical protein C8J_1427 1448292 - 1447315 - | hypothetical protein TERM 1541 1448022 - 1448034 + g 70 -3.5 -5.07567 | opp_overlap 1448021 1448029, overlap 1448011 TACATTTTTGAACAT TTAAA AAT TTTAA TTTTTTAAAATATAA purM 1449341 - 1448352 - | phosphoribosylaminoimidazole synthetase C8J_1429 1449402 - 1450007 + | dephospho-CoA kinase TERM 1542 1450534 - 1450512 - g 70 -5 -4.59853 | TTAATTTTGTAAAAA TTTTAGATGA AAA TCATTTAAAA GTTCGCACCTATGAA dapF 1450004 - 1450753 + | diaminopimelate epimerase C8J_1431 1450860 - 1451462 + | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein C8J_1432 1452496 - 1451459 - | hypothetical protein TERM 1543 1451791 - 1451812 + g 83 -2.4 -5.88471 | overlap 1451792 TTCTTAGGCCAAAAT CTTTAAAA TAAATC TTTTGAAG TTTTTTTTCATCATG TERM 1544 1452502 - 1452520 + r 77 -9 -3.3573 | opp_overlap 1452499 GTACTTTCAAAATTT TATCCTTT AAA AAAGGATA TTATAACCTAGTTTG TERM 1545 1452543 - 1452557 + r 73 -8.5 -3.2352 | opp_overlap 1452542 CTAGTTTGTATAATT GGGGC ATAAA GCCCC TTAAATTACATTTTG C8J_1433 1453012 - 1452563 - | bacterioferritin TERM 1546 1453096 - 1453041 - R 75 -7.6 -4.14392 | gap 1, opp_overlap 1453041 1453054, overlap 1453054 TTTTAATTTTTAAAA TTATAACATAAAATTCTTAAATAATAA TTA TTATTAATTAAAAATTTT-TATTATAA TTTTAACTTAAAATC TERM 1547 1453084 - 1453054 - R 71 -5 -4.76193 | opp_overlap 1453054 1453041, overlap 1453041 AATTATAACATAAAA TTCTTAAATAATAA TTA TTATTAATTAAAAA TTTTTATTATAATTT pgi 1454359 - 1453139 - | glucose-6-phosphate isomerase galU 1455177 - 1454353 - | UTP-glucose-1-phosphate uridylyltransferase TERM 1548 1454397 - 1454381 - G 85 -8.1 -4.40561 | TTCTCGTAAAAATAA TTTGTAG CCT CTACAAA GCCTTCTACACTTCC TERM 1549 1455258 - 1455235 - R 77 -9.7 -3.06831 | opp_overlap 1455235 1455238, overlap 1455238 TGAATTTTTATGCAA CAAGGCAAA GTTCTT TTTGCCTTG TTATTCAAACTCTGC TERM 1550 1455235 - 1455258 + r 87 -10.4 -3.64487 | opp_overlap 1455235 1455238, overlap 1455238 TGAATTTTTATGCAA CAAGGCAAAG TTCT TTTTGCCTTG TTATTCAAACTCTGC acs 1457232 - 1455259 - | acetyl-CoA synthetase C8J_1437 1458365 - 1457370 - | tungsten ABC transporter, ATP-binding protein, putative TERM 1551 1457436 - 1457450 + g 73 -5.8 -4.52873 | opp_overlap 1457427 1457435, overlap 1457427 GTATAATTTTAAATC GAATTT TAA AAATTC TTGTTTTTCTAAGGC TERM 1552 1457942 - 1457953 + g 75 -4.4 -5.24449 | opp_overlap 1457942 TTACGCTTAAAGCTA TAGC AAAA GCTA TTTTTTGACTTTGTC TERM 1553 1457965 - 1457990 + g 82 -7.7 -4.41616 | overlap 1457967 GCTATTTTTTGACTT TGTCCTGATGA AAGT TCATTAGGATA TTTATTTAAAAGACT TERM 1554 1457967 - 1457988 + g 77 -8.1 -3.81557 | overlap 1457965 TATTTTTTGACTTTG TCCTGATGA AAGT TCATTAGGA TATTTATTTAAAAGA C8J_1438 1459053 - 1458367 - | tungsten ABC transporter, permease protein, putative TERM 1555 1459076 - 1459101 + H 100 -6.3 -5.72616 | opp_overlap 1459078, overlap 1459078 CTTTTTAAAATAAGT AATTTTAGCAT AATT ATGCTAAAATA TTTTTTTATGTAAAT TERM 1556 1459099 - 1459078 - H 81 -8.9 -3.68798 | opp_overlap 1459076 1459078 TTTTAAAATAAGTAA TTTTAGCAT AATT ATGCTAAAA TATTTTTTTATGTAA TERM 1557 1459078 - 1459099 + H 86 -8.9 -4.50122 | opp_overlap 1459078, overlap 1459076 TTTTAAAATAAGTAA TTTTAGCAT AATT ATGCTAAAA TATTTTTTTATGTAA C8J_1439 1459132 - 1459941 + | putative sulfate transport system substrate-binding protein TERM 1558 1459968 - 1459945 - f 100 -12.6 -4.99972 | opp_overlap 1459943 1459941 AGAAAAGACTAAAAA TTAAGCAGGT TTTA ACCTGCTTAA AATATCATTTTTTAC C8J_1440 1460083 - 1460850 + | hypothetical protein TERM 1559 1461232 - 1461214 - g 70 -6 -4.25676 | AATCAAATTTCAAAA GAAGAGCT TAT ATCTCTTC ACACTAAGCCTTATT C8J_1441 1460860 - 1461600 + | hypothetical protein C8J_1442 1461581 - 1462546 + | hypothetical protein C8J_1443 1463439 - 1462543 - | integral membrane protein TERM 1560 1462880 - 1462902 + g 91 -9.9 -4.05446 | opp_overlap 1462878 1462875 ATATAAAAGTTAATC GCCAAAGGG TGAAC TCCTTTGGC TTTATGATTAAACAC TERM 1561 1463469 - 1463479 + r 71 -2.6 -5.45726 | opp_overlap 1463468 1463469, overlap 1463468 ATTTTTAAGTCAAAT TTTT TAA AAAA TTTTTTTCAAGTGTA C8J_1444 1464050 - 1463472 - | flavodoxin-like fold domain protein C8J_1445 1464150 - 1464491 + | hypothetical protein C8J_1446 1464484 - 1464933 + | BLC-like protein C8J_1447 1466011 - 1464935 - | oxidoreductase, zinc-binding dehydrogenase family TERM 1562 1465079 - 1465065 - G 75 -4.3 -5.27335 | opp_overlap 1465065 TGTTTTAAAGAAAAA TCAAG CATTT CTTGA GTTTCAGCAATACCG TERM 1563 1465524 - 1465535 + g 70 -4.4 -5.00616 | opp_overlap 1465507, overlap 1465500 AAAGGCGCAACCTTA TGCA TTGG TGCA TTTTTTGGCACACAA TERM 1564 1466357 - 1466343 - g 71 -7.2 -3.7511 | CTTGCTATAATAGAA GCTAAA AAA TTTAGC AAAGATCCTTTAGAT C8J_1448 1466142 - 1468451 + | hypothetical protein TERM 1565 1468670 - 1468658 - g 82 -6.3 -5.25803 | AATGGCGATAAAAAA TTAGC TTT GCTAA AAAGTAGTGTGATTT TERM 1566 1468872 - 1468858 - g 70 -5 -4.53303 | TATTTTTATACAAAA TGACAC AAA GTATCA ATATGGCTTTATTTT TERM 1567 1469221 - 1469207 - g 76 -2.8 -5.50925 | AATGAATATAAAAAA GACAAA GAA TTAGTC AATAGTTTTTTTAAA TERM 1568 1469727 - 1469710 - g 75 -4.2 -5.26119 | opp_overlap 1469710 TTGCGAAAAACAAAA TAAAGC AACCAA GCTTTA TCCTTTGAGTGATTT C8J_1449 1468541 - 1469863 + | hypothetical protein C8J_1450 1469853 - 1470485 + | RloB C8J_1451 1470482 - 1471693 + | hypothetical protein TERM 1569 1472663 - 1472653 - g 70 -4 -4.98911 | TATCATAAAAACAAA TACT TTA AGTA AAAAAATAACAGATA hsdM 1471838 - 1473322 + | type I restriction-modification system, M subunit C8J_1453 1474155 - 1473400 - | hypothetical protein TERM 1570 1474209 - 1474193 - R 88 -5.9 -5.28826 | AAAGTTTATAAAAAA GAGCATT TAA AATACTC AAAAAAAACATAAAA TERM 1571 1474213 - 1474249 + r 81 -9.1 -3.671 | opp_overlap 1474218, overlap 1474218 1474226 TTTAAAATACTCAAA AAAAACATAAAAGTTTT TAT AAAATTTTTATGTTTTA TTTACAAATTTCTTT TERM 1572 1474218 - 1474244 + r 93 -9 -4.88405 | opp_overlap 1474218, overlap 1474213 1474226 AATACTCAAAAAAAA CATAAAAGTTTT TAT AAAATTTTTATG TTTTATTTACAAATT TERM 1573 1474244 - 1474218 - R 100 -6.8 -5.85178 | opp_overlap 1474218 1474213 1474226 AATACTCAAAAAAAA CATAAAAGTTTT TAT AAAATTTTTATG TTTTATTTACAAATT C8J_1454 1474682 - 1474263 - | hypothetical protein C8J_1455 1475930 - 1474740 - | transporter, putative TERM 1574 1475306 - 1475323 + g 81 -7.1 -4.60924 | opp_overlap 1475306 1475309 GTGGGTATCTTAAAA TAAGCAA TTGT TTGCTTA TTTTTACAGAATTTA TERM 1575 1475323 - 1475306 - G 75 -7.1 -4.13767 | opp_overlap 1475306, overlap 1475309 GTGGGTATCTTAAAA TAAGCAA TTGT TTGCTTA TTTTTACAGAATTTA C8J_1456 1476079 - 1476984 + | hypothetical protein arsR 1476994 - 1477311 + | arsenical resistance operon repressor arsC 1477308 - 1477730 + | arsenate reductase C8J_1459 1477724 - 1478767 + | arsenical-resistance protein, putative TERM 1576 1478771 - 1478751 - T 71 -2.5 -5.49809 | opp_overlap 1478752, overlap 1478752 TAAATTCTAAAAAAA TGAATCAAG CCT CATGATTCT TTACAAAACTTATCA C8J_1460 1479190 - 1478762 - | putative transcriptional regulator TERM 1577 1480691 - 1480676 - g 72 -6.2 -4.28049 | GTTAAAATGCTAAAA CAAAGT TCAG ACTTTG CTAATGCTTTAGCTA C8J_1461 1479302 - 1481257 + | putative methyl-accepting chemotaxis signal transduction protein pflA 1483666 - 1481300 - | paralyzed flagella protein PflA TERM 1578 1482690 - 1482673 - G 76 -9.9 -2.64155 | overlap 1482670 TCTTTGCCAAACTCA TAGCTGC TCTT GCAGCTA AATCTAAATTTTTTG TERM 1579 1483316 - 1483294 - G 81 -7.2 -4.56597 | overlap 1483299 GTTCTGGTGTAAAAA TAAAAGTAAA AGC CTTACTTTTA TGCGAACTTGATGAA nuoN 1485077 - 1483689 - | NADH-quinone oxidoreductase, N subunit nuoM 1486554 - 1485067 - | NADH-quinone oxidoreductase, M subunit TERM 1580 1485531 - 1485516 - G 72 -4.8 -4.88293 | opp_overlap 1485516 1485514 AATGGTAAAAAGAAA TATCAT AAGT ATGATA TCTTTGGTATAAAAG TERM 1581 1486077 - 1486059 - G 71 -6.8 -3.90729 | opp_overlap 1486051 AATAAGCTTGATAAA TCAATGCT ATA AGCATTAA AATTGAACCCGCAAA nuoL 1488346 - 1486556 - | NADH dehydrogenase subunit L nuoK 1488644 - 1488348 - | NADH-quinone oxidoreductase, K subunit nuoJ 1489159 - 1488641 - | NADH dehydrogenase subunit J nuoI 1489797 - 1489156 - | NADH dehydrogenase subunit I nuoH 1490805 - 1489807 - | NADH dehydrogenase subunit H nuoG 1493260 - 1490798 - | NADH dehydrogenase subunit G TERM 1582 1490964 - 1490987 + g 75 -4 -5.20783 | TCTTTTATTTTAAGT TTTACAAGAT CTTT ATCTTTTAAA TTTTTCTCTTTAGCT C8J_1471 1493949 - 1493257 - | hypothetical protein C8J_1472 1494173 - 1493946 - | NADH dehydrogenase I chain E nuoD 1495396 - 1494170 - | NADH dehydrogenase subunit D TERM 1583 1494660 - 1494640 - G 71 -6.9 -3.97834 | opp_overlap 1494639 CAACTTCATTATAAA GCAAATAAG GCT CTTCTTTGC GTATATCGTATTTTA TERM 1584 1495129 - 1495143 + g 76 -10 -2.84173 | opp_overlap 1495128 1495126 1495125 AATAAGCATAATTAT TCGCTG AAG CAGCGA TATAGTCCATTCTAT nuoC 1496189 - 1495398 - | NADH dehydrogenase subunit C nuoB 1496692 - 1496189 - | NADH dehydrogenase subunit B nuoA 1497063 - 1496674 - | NADH dehydrogenase subunit A TERM 1585 1497020 - 1496997 - G 83 -3.2 -5.78622 | CCAGTCCAAAAAAAA TAACACTAGC AAGT ACTAGCATTA AAAAAATACCAAAAT C8J_1477 1497841 - 1497176 - | peptide ABC transporter, ATP-binding protein TERM 1586 1497504 - 1497515 + g 71 -3 -5.31158 | opp_overlap 1497504 AAATTTTCCAAACCA TCTT GTAT AAGA TTTTTAATTTTTTTA TERM 1587 1497762 - 1497750 - G 77 -4.9 -5.30616 | opp_overlap 1497754, overlap 1497754 TCATTTAAAGAAAAA TTGAT ATT ATCAA AAATAATATGTCTTT C8J_1478 1498502 - 1497834 - | peptide ABC transporter, ATP-binding protein C8J_1479 1499329 - 1498541 - | peptide ABC transporter, permease protein C8J_1480 1500266 - 1499322 - | peptide ABC transporter, permease protein TERM 1588 1499404 - 1499394 - G 71 -3.2 -5.30575 | TAAAAATGTAAAAAA TGCC GCA AGCA AAACACTAAAAAATA TERM 1589 1499470 - 1499456 - G 71 -5.8 -4.42235 | overlap 1499443 AATCTTTAAAAATAA TACTTT TAA AAAGTA AAGACCCAAGCCCCT TERM 1590 1500112 - 1500100 - G 74 -7.7 -3.72893 | opp_overlap 1500099 TACTGCTCTAGCAAA GGCTT ATC AAGCC CTAAATTTTGTTCTA C8J_1481 1501801 - 1500266 - | peptide ABC transporter, periplasmic peptide-binding protein C8J_1482 1502097 - 1503515 + | hypothetical protein C8J_1483 1503527 - 1504459 + | hypothetical protein C8J_1484 1504470 - 1505126 + | hypothetical protein C8J_1485 1505113 - 1505979 + | hypothetical protein TERM 1591 1506125 - 1506152 + G 100 -13 -3.1505 | opp_overlap 1506123 1506122, overlap 1506118 CACCGCTTTAAAGCT TTTATCATCTTC AAAC GAAGATGATAAA TTAATAGCAAGTGAT TERM 1592 1506501 - 1506483 - g 93 -10.4 -3.89055 | opp_overlap 1506484 ACACATTTTTATAAA GCATTAAC AAT GTTAATGC AAGATTTTTTCAATC C8J_1486 1505979 - 1506536 + | hypothetical protein C8J_1487 1506603 - 1507025 + | flavohemoprotein, truncation TERM 1593 1507047 - 1507026 - T 73 -6.7 -4.11183 | gap 1, opp_overlap 1507031, overlap 1507031 CTCTATGATAAATAA TATAAGCCCA TTT TGGGCTT-TA ATCAAATTTTTCTAC TERM 1594 1507031 - 1507043 + T 81 -9.1 -3.79623 | opp_overlap 1507026 1507031 TGATAAATAATATAA GCCCA TTT TGGGC TTTAATCAAATTTTT TERM 1595 1507043 - 1507031 - T 83 -9.1 -3.93744 | opp_overlap 1507031, overlap 1507026 TGATAAATAATATAA GCCCA TTT TGGGC TTTAATCAAATTTTT C8J_1488 1508676 - 1507045 - | multidrug transporter membrane component/ATP-binding component TERM 1596 1507185 - 1507214 + g 71 -7.4 -3.73995 | gap 1, overlap 1507197 TGATAGCAAAGATTG TTTTACC-TTGCT CTTTT AGCAAAGGTAAAA GTTTTTTATAAAAAA TERM 1597 1507197 - 1507215 + g 77 -4.6 -5.24129 | overlap 1507185 TTGTTTTACCTTGCT CTTTTAGC AAA GGTAAAAG TTTTTTATAAAAAAA TERM 1598 1507607 - 1507595 - G 75 -4.8 -5.07941 | opp_overlap 1507595 AAAAGCATACAAAAA GTGG ATTTA CCAC TTCCATTTTTACCTA TERM 1599 1507703 - 1507715 + g 85 -4.9 -5.53288 | opp_overlap 1507712 TAAGCAAATTGAGTA TTTCT AAA AGAAA TTTTTTTCCATTCGC TERM 1600 1508201 - 1508189 - G 73 -3.5 -5.1861 | TTCATCATCAAAAAA TTATT AGT AATAA AAATAACCATAATCC C8J_1490 1510021 - 1508726 - | putative transmembrane transport protein TERM 1601 1509563 - 1509580 + g 70 -3.5 -5.07486 | TGAATTTAAACAGCT TAAAAAG AAAG CTTTTTG TTTTTCTTGACAATG C8J_1491 1510118 - 1510915 + | hypothetical protein infA 1511003 - 1511221 + | translation initiation factor IF-1 C8J_1493 1511393 - 1511506 + | 50S ribosomal protein L36 rpsM 1511509 - 1511874 + | 30S ribosomal protein S13 C8J_1495 1511884 - 1512276 + | 30S ribosomal protein S11 rpsD 1512304 - 1512930 + | 30S ribosomal protein S4 rpoA 1512943 - 1513956 + | DNA-directed RNA polymerase subunit alpha rplQ 1513960 - 1514313 + | 50S ribosomal protein L17 TERM 1602 1514336 - 1514319 - f 88 -9.9 -3.91911 | opp_overlap 1514319 TGTAGCTTAATCAAA TCCTAGC TTTT GCTAGGA TTAATACTTCAATTA TERM 1603 1514319 - 1514336 + F 81 -9.9 -3.28984 | opp_overlap 1514319 TGTAGCTTAATCAAA TCCTAGC TTTT GCTAGGA TTAATACTTCAATTA TERM 1604 1514846 - 1514832 - g 77 -5.8 -4.87892 | opp_overlap 1514831, overlap 1514833 CCTCAAGAAAATAAA TTTCAA AAT TTGAAA GATTTTGAAGGCTTA TERM 1605 1515214 - 1515197 - g 79 -5.6 -5.07652 | opp_overlap 1515197 TGCTCCAAAAGAAAA GCTTGA TAAAAT TCAAGC TCTGCTTCCAGGAGT TERM 1606 1515283 - 1515272 - g 78 -3 -5.56568 | opp_overlap 1515272 ACACGATGAAAAAAA TGTA GCTT TACA TATGGTAAGTAAAGA hisG 1514487 - 1515386 + | ATP phosphoribosyltransferase TERM 1607 1515458 - 1515436 - g 82 -4.1 -5.65496 | gap 1, opp_overlap 1515440, overlap 1515439 1515441 1515451 GATGAAAAACAAAAA GAAGAGGCGT TAAA ACGCC-CTGC TATAAGCGCGAAGGA TERM 1608 1515455 - 1515439 - g 70 -4.4 -4.855 | gap 1, opp_overlap 1515440, overlap 1515436 1515441 1515451 GAAAAACAAAAAGAA GAGGCGT TAAA ACGCC-C TGCTATAAGCGCGAA TERM 1609 1515454 - 1515441 - g 79 -8.1 -3.97385 | opp_overlap 1515440, overlap 1515439 1515436 1515451 AAAACAAAAAGAAGA GGCGT TAAA ACGCC CTGCTATAAGCGCGA TERM 1610 1515826 - 1515842 + G 87 -10.9 -3.2963 | TTAATGTTAGCTATC CCTGCAA AAA TTGCAGG TTGTGAAAAAATCGT hisD 1515394 - 1516680 + | histidinol dehydrogenase TERM 1611 1516865 - 1516879 + G 77 -7.2 -4.20696 | TCTTGGAACGCCGAG TTTTCC AAA GGAAAA TTTTGAAATTGCTCA hisB 1516677 - 1517735 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 1517732 - 1518319 + | imidazole glycerol phosphate synthase subunit HisH TERM 1612 1518408 - 1518397 - g 88 -3 -6.13503 | TATGAACAAAAAAAA GTAT ATAA ATAC AATCCCTTGGAAAAA hisA 1518316 - 1519050 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 1613 1519119 - 1519106 - g 72 -5.3 -4.8066 | overlap 1519113 AACACAATTTAAAAA CCATA AAGA TATGG GAGATATCATAGAGC hisF 1519032 - 1519799 + | imidazole glycerol phosphate synthase subunit HisF TERM 1614 1519842 - 1519832 - g 79 -5.4 -5.29385 | opp_overlap 1519838 AACTTAATGAAAAAA TTGC TTG GCAA AAAGTGGATCATCTT hisI 1519801 - 1520424 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 1615 1520435 - 1520411 - T 85 -8.7 -4.4784 | opp_overlap 1520428, overlap 1520413 CAAAGTTGAAAGAAA GACATAAAGCT TAA AGCTTTATGTA AATAAATTTATATCA TERM 1616 1520433 - 1520413 - T 91 -11.3 -3.8323 | opp_overlap 1520428, overlap 1520411 AAGTTGAAAGAAAGA CATAAAGCT TAA AGCTTTATG TAAATAAATTTATAT dapD 1521608 - 1520448 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase mrp 1522740 - 1521634 - | ATP/GTP-binding protein TERM 1617 1523073 - 1523060 - g 72 -5.3 -4.79667 | AAAATTTACTAAAAA CTATG AATT CATAG AAGGTGGTGATACCA C8J_1508 1522863 - 1523978 + | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein C8J_1509 1523975 - 1524862 + | DNA-binding response regulator, putative C8J_1510 1524840 - 1526000 + | ATP-sulfurylase family protein pgpA 1526005 - 1526505 + | phosphatidylglycerophosphatase A rpsT 1526584 - 1526847 + | 30S ribosomal protein S20 TERM 1618 1527220 - 1527230 + G 70 -5.4 -4.55295 | GCAGGTACAGGTGGC GATG AGG CATC TTTATTTGTAGGAGA prfA 1526866 - 1527933 + | peptide chain release factor 1 C8J_1514 1528702 - 1527947 - | hypothetical protein TERM 1619 1528464 - 1528485 + g 73 -9.5 -2.59185 | overlap 1528463 1528461 CTAAAATTTTGCTCG CTCTTTGCA CTCA TGCAAAGGG ATATTATAGTATCTT chuA 1528896 - 1531013 + | TonB-dependent heme receptor chuB 1530967 - 1531974 + | putative haemin transport system permease protein chuC 1531974 - 1532750 + | hemin ABC transporter, ATP-binding protein, putative chuD 1532747 - 1533553 + | putative haemin transport system substrate-binding protein C8J_1519 1534428 - 1533550 - | hypothetical protein TERM 1620 1534475 - 1534486 + H 78 -3 -5.7827 | TGTAACATTTTTATC GATA TTTT TATC TTTTTTATTTCTCTT TERM 1621 1535076 - 1535088 + G 90 -4.9 -5.75538 | TTTGGCCGTTGCAAG CATTA GTA TAATG TTTTTATTTTTTAGC TERM 1622 1535495 - 1535509 + G 75 -4.3 -5.1925 | GTATTTTGGCATTGG TAGGA ATTTA TCCTA TTTTTTCACTTATAG kgtP 1534573 - 1535832 + | alpha-ketoglutarate permease mutY 1536837 - 1535818 - | A/G-specific adenine glycosylase TERM 1623 1535874 - 1535849 - G 95 -12 -3.68619 | opp_overlap 1535853, overlap 1535853 TTTAACGCATTTAAA GAAAGTACCG AAAGTG CGGTACTTTC TAACTCTTTTAAGGT TERM 1624 1535870 - 1535853 - G 76 -7 -4.46514 | opp_overlap 1535853, overlap 1535849 ACGCATTTAAAGAAA GTACCG AAAGTG CGGTAC TTTCTAACTCTTTTA TERM 1625 1535853 - 1535870 + g 71 -7 -4.01564 | opp_overlap 1535849 1535853 ACGCATTTAAAGAAA GTACCG AAAGTG CGGTAC TTTCTAACTCTTTTA TERM 1626 1536873 - 1536852 - H 70 -7.5 -3.50929 | opp_overlap 1536869, overlap 1536849 TAAATGAGAGTATAA CAAAAAATT TTAA AATTTTTTG CTAAAATTAGCTCAA C8J_1522 1536910 - 1537662 + | putative periplasmic protein TERM 1627 1537669 - 1537699 + F 81 -10 -3.18381 | opp_overlap 1537668 1537675, overlap 1537665 1537664 TGCAAATAACTTAAG GCAAAATAAACT CCTTTTA AGTTTATTTTGC TATACTTTTATCTTC TERM 1628 1537775 - 1537759 - f 75 -9.5 -2.62983 | overlap 1537762 CTCAGGGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA TERM 1629 1537863 - 1537843 - f 71 -8.3 -2.89742 | overlap 1537846 TGGAATTGGTAGACA CAAGGGACT TAA AATCCCTCG GAATTTTTCTTCCGT C8J_1523 1538167 - 1538271 + | hypothetical protein TERM 1630 1538727 - 1538703 - g 74 -3 -5.41143 | TAGGTTTTAAAAAAA TTTTCATC AGCGTTAAA GATGAAAA TAAAATCGCAAGTGG TERM 1631 1538870 - 1538843 - g 75 -5.8 -4.7416 | gap 1, opp_overlap 1538843 TTAAAATGGCAAAAA GAGC-AATTTAAA CTT TTTAAATTAGCCC TTTCTATGAATGGCT ribD 1538312 - 1539322 + | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase C8J_1525 1539303 - 1539824 + | hypothetical protein TERM 1632 1539839 - 1539810 - T 100 -9.5 -5.4148 | opp_overlap 1539810 1539819, overlap 1539814 CAAAGAATGAAAAAA TACACTAAAGTGT AAAA ACACTTTAGCATA CTGTTTTTAAATTTG TERM 1633 1539835 - 1539814 - T 85 -10.3 -3.71857 | opp_overlap 1539810 1539819, overlap 1539810 GAATGAAAAAATACA CTAAAGTGT AAAA ACACTTTAG CATACTGTTTTTAAA sdaA 1541196 - 1539832 - | L-serine ammonia-lyase sdaC 1542461 - 1541211 - | serine transporter TERM 1634 1542195 - 1542184 - G 83 -3 -5.69023 | AAAATAGCAAAAAAA TACA AAAG TGTA ATTAAAAATCCACCA TERM 1635 1542679 - 1542658 - R 100 -7.4 -5.77571 | opp_overlap 1542658 ATCAAAAAATAAAAA TTTGGAAG ACTATG CTTCCAAA TTTTTGCATCAAATT TERM 1636 1542658 - 1542679 + r 81 -7.4 -4.67011 | opp_overlap 1542658 ATCAAAAAATAAAAA TTTGGAAG ACTATG CTTCCAAA TTTTTGCATCAAATT C8J_1528 1543137 - 1542721 - | putative periplasmic protein C8J_1529 1543945 - 1543202 - | hypothetical protein TERM 1637 1544053 - 1544065 + H 70 -3.5 -5.1361 | TTATAAATTTATTTT TTATA TAG TATAA TTTTTTAAAATTTAT exbB2 1544103 - 1544528 + | ExbB/TolQ family transport protein exbD 1544521 - 1544910 + | biopolymer transport exbD protein TERM 1638 1544982 - 1545002 + G 72 -4.1 -5.0538 | ATACCTTTACTTTTT GTCATTT TTCACTC AAATGAC TTTTTTAAAATGGAA tonB2 1544907 - 1545590 + | putative TonB transport protein TERM 1639 1545587 - 1545577 - T 73 -6.8 -4.16279 | TATATGATTTTAAAA CCCT AAG AGGG TAAAATTATAATTTG C8J_1533 1546472 - 1545603 - | hypothetical protein TERM 1640 1545633 - 1545643 + g 72 -4 -5.08255 | overlap 1545635 TACAATTTGCGCTTC TTGA TTT TCAA TTTTATTTTGAAAAT TERM 1641 1545682 - 1545692 + g 70 -4 -4.90917 | overlap 1545686 AAATTCTGACTTAAT TCTT GCA AAGA TTTTTGCTTCAGTTT TERM 1642 1546188 - 1546170 - G 85 -10.4 -3.59262 | opp_overlap 1546170, overlap 1546181 TTTTACACTTTCAAA CCAATTTG AAA CAAATTGG TTTGCTTCGCCATTA TERM 1643 1546170 - 1546188 + g 93 -10.4 -3.91798 | opp_overlap 1546170 1546181 TTTTACACTTTCAAA CCAATTTG AAA CAAATTGG TTTGCTTCGCCATTA C8J_1534 1546637 - 1546476 - | putative periplasmic protein C8J_1535 1546732 - 1547715 + | hypothetical protein TERM 1644 1547780 - 1547795 + T 100 -9 -6.34616 | opp_overlap 1547780 AAATATTGCAATCAA GCCCAT GAAA ATGGGC TTTTTTTTATTTTAA TERM 1645 1547795 - 1547780 - T 77 -9 -3.37901 | opp_overlap 1547780 AAATATTGCAATCAA GCCCAT GAAA ATGGGC TTTTTTTTATTTTAA aroC 1548890 - 1547802 - | chorismate synthase rnc 1549564 - 1548890 - | ribonuclease III rnhA 1549991 - 1549551 - | ribonuclease H C8J_1539 1550964 - 1549978 - | hypothetical protein TERM 1646 1550770 - 1550750 - G 70 -4.1 -5.00884 | ATTTCGGCCAAAAAA CTTAAATTT CCA AAACTCAAG CTACTATTTCTTAAC TERM 1647 1552467 - 1552443 - g 70 -8.9 -2.70932 | opp_overlap 1552434 1552448, overlap 1552448 1552463 TGTTTGTTTTAAGCA TAAAATTTTAT TGG ATAAAATTTTA GAAAAAAAAGGTTAT dnaG 1551034 - 1552851 + | DNA primase C8J_1541 1552933 - 1553205 + | NifU family protein C8J_1542 1553192 - 1553743 + | hypothetical protein TERM 1648 1554949 - 1554961 + G 72 -6.3 -4.30844 | opp_overlap 1554944 1554943 CTCAAGAAATTAAAG GGATA AAA TATCC TTTTAGTGATAAAGT murE 1553727 - 1555010 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase C8J_1544 1555014 - 1555325 + | hypothetical protein TERM 1649 1556196 - 1556186 - g 72 -5.4 -4.68645 | GATCCAAAATCAAAA GCAT CAA ATGC AGGATTTATGGTAGG C8J_1545 1555322 - 1556416 + | PDZ domain-containing protein TERM 1650 1556740 - 1556756 + G 71 -3 -5.32944 | ATCTTAGTGGGTGAT GCTTTA AATAC TGAAGC TTTTTTAGTTCTAAG ispA 1556413 - 1557258 + | geranyltranstransferase TERM 1651 1558843 - 1558882 + G 72 -6.7 -4.0371 | gap 1, opp_overlap 1558816 1558850 1558853 AAAGAAAGCAAAGAC GCTAAATTTACACTTCTA GCAAG TGGAAGTG-AAGTTTGGC TTTGTCTAGAAAGTG tkt 1557268 - 1559166 + | transketolase C8J_1548 1559168 - 1560277 + | ABC transporter, permease protein, putative C8J_1549 1560278 - 1561000 + | ABC transporter, ATP-binding protein TERM 1652 1561768 - 1561756 - g 74 -7.7 -3.86916 | opp_overlap 1561761 TATGATGATATTAAA GCATC TTT GATGC AAAATTTAGAACTTT TERM 1653 1561828 - 1561848 + G 72 -8.3 -3.33922 | opp_overlap 1561828 1561833, overlap 1561827 CTAATAGAAAATTTA CAAAACAGC CCT GCTGATTTG ATTTTTAAAGAAACT TERM 1654 1561843 - 1561833 - g 78 -6.8 -4.5538 | opp_overlap 1561828 1561827, overlap 1561828 AGAAAATTTACAAAA CAGC CCT GCTG ATTTGATTTTTAAAG C8J_1550 1561003 - 1561893 + | ABC transporter, periplasmic substrate-binding protein, putative C8J_1551 1561893 - 1562492 + | putative lipoprotein TERM 1655 1562628 - 1562614 - g 71 -7.2 -3.81027 | overlap 1562624 GTGAATGAATTTAAA GCAAAT CAA ATTTGC TCTCAAATCAATGAT TERM 1656 1562662 - 1562674 + G 71 -7.7 -3.40082 | opp_overlap 1562662, overlap 1562667 AATGATTTTATAGGA GCACT TCA AGTGC TTGATATGTCTTTAA C8J_1552 1562548 - 1563048 + | hypothetical protein TERM 1657 1563066 - 1563104 + T 100 -12 -4.11371 | opp_overlap 1563090 ATAGTAATCGTTTGT TCTCTTTAAGCAAATATA ATA TATTTTAGCTTAAAGAGA TTTTCCAAACTCTTA TERM 1658 1563173 - 1563190 + T 77 -8.5 -3.60627 | opp_overlap 1563172 1563173 1563175 TAGCCTAACCCAAAC GAGATCT TAAA AGATCTC TTTAAACTAAAATAA TERM 1659 1563190 - 1563173 - T 71 -8.5 -2.85354 | opp_overlap 1563173, overlap 1563172 1563175 TAGCCTAACCCAAAC GAGATCT TAAA AGATCTC TTTAAACTAAAATAA TERM 1660 1563247 - 1563207 - T 100 -10.9 -4.82998 | opp_overlap 1563207 1563207 1563205 1563241, overlap 1563209 TTAAACTAAAATAAA TATTTAGATAATTTAATAA TTT TTATTAAATTATCTAAACC ATATTTATGTTTTAG TERM 1661 1563207 - 1563247 + T 71 -8.7 -2.88509 | opp_overlap 1563207 1563209, overlap 1563207 1563205 1563241 TTAAACTAAAATAAA TATTTAGATAATTTAATAA TTT TTATTAAATTATCTAAACC ATATTTATGTTTTAG TERM 1662 1563245 - 1563209 - T 100 -15.7 -4.00914 | opp_overlap 1563207 1563207 1563205 1563241, overlap 1563207 AAACTAAAATAAATA TTTAGATAATTTAATAA TTT TTATTAAATTATCTAAA CCATATTTATGTTTT map 1564178 - 1563420 - | methionine aminopeptidase murI 1564931 - 1564188 - | glutamate racemase nlpC 1565394 - 1564933 - | lipoprotein NlpC nhaA-1 1566572 - 1565403 - | Na+/H+ antiporter NhaA TERM 1663 1566004 - 1565978 - G 74 -6.6 -4.35581 | opp_overlap 1565984, overlap 1565995 CTAAAATATTTAAAA CAAGCATTGCCA AAA TAGCAATTCCTG CAACGACAAAAGCAA nhaA1 1567699 - 1566569 - | Na+/H+ antiporter NhaA TERM 1664 1566637 - 1566618 - G 76 -5 -5.09225 | opp_overlap 1566618, overlap 1566621 ATGGCACTTAAAAAA CTAGCTAT TAAA ATAGCAAG TTTATCCGCATGTTC TERM 1665 1567846 - 1567814 - R 100 -7.2 -5.49729 | gap 1, opp_overlap 1567814 1567836 AATTATTTAAAAAAA CAAGCTCAAGATACC AACA AGT-TCTTAAGCTTG TTCTTAAGATATTTA C8J_1558 1568041 - 1567859 - | hypothetical protein C8J_1559 1568372 - 1568575 + | hypothetical protein TERM 1666 1569914 - 1569900 - g 70 -4.2 -4.96388 | AATGATGAAACAAAA GGCAAA GAT TATGCC AAAGTTTCTAATGAT TERM 1667 1570612 - 1570626 + G 75 -4.2 -5.24531 | CTGTTTATAGAGAAG GTGCAG AAA CTGTGC TTTTTTATCAAGCCT C8J_1560 1568925 - 1571015 + | FTR1 family iron permease p19 1571012 - 1571551 + | hypothetical protein TERM 1668 1571549 - 1571583 + F 86 -5 -5.74684 | opp_overlap 1571549 1571552 1571582, overlap 1571552 1571557 ACAGGCACGCCAAAA TGATTTTACACTCGGA TTT TCCGAGTGTTTAAATA TTTTTATTTTTATTG TERM 1669 1571552 - 1571581 + F 78 -7.3 -4.45545 | gap 1, opp_overlap 1571552 1571549, overlap 1571549 1571557 GGCACGCCAAAATGA TTT-TACACTCGGA TTT TCCGAGTGTTTAAA TATTTTTATTTTTAT TERM 1670 1571580 - 1571552 - f 74 -8.9 -3.09831 | opp_overlap 1571549 1571552 1571557, overlap 1571549 GGCACGCCAAAATGA TTTTACACTCGGA TTT TCCGAGTGTTTAA ATATTTTTATTTTTA TERM 1671 1571557 - 1571575 + F 100 -13.2 -3.89368 | opp_overlap 1571552 1571549, overlap 1571552 1571549 GCCAAAATGATTTTA CACTCGGA TTT TCCGAGTG TTTAAATATTTTTAT C8J_1562 1571633 - 1573036 + | hypothetical protein C8J_1563 1573026 - 1574315 + | ABC transporter permease C8J_1564 1574305 - 1575423 + | ABC transporter, permease protein C8J_1565 1575423 - 1576073 + | ABC transporter ATP-binding protein C8J_1566 1576106 - 1576558 + | periplasmic thioredoxin C8J_1567 1576519 - 1577022 + | thioredoxin family protein C8J_1568 1577469 - 1577032 - | hypothetical protein C8J_1569 1578192 - 1577749 - | hypothetical protein TERM 1672 1578227 - 1578253 + r 71 -4.6 -4.85433 | opp_overlap 1578239, overlap 1578249 TTTTGTATATTTTAA TTATTTTTCAAA TCT TTTGCAAGATAA TTTTTAAATTTATCT TERM 1673 1578491 - 1578505 + r 72 -7.8 -3.322 | CGAACCTCTGACCTA CGGCTT AGA AGGCCG TTGCTCTATCCAGCT C8J_1570 1579698 - 1578850 - | DNA ligase C8J_1571 1580360 - 1579698 - | hypothetical protein C8J_1572 1580553 - 1580350 - | hypothetical protein eno 1581863 - 1580619 - | phosphopyruvate hydratase recA 1582894 - 1581863 - | recombinase A TERM 1674 1582827 - 1582839 + g 76 -6.3 -4.55721 | AGTCTTAAGATAGTG CCTTT TCC AAAGG TTTTATCTAAACTTT C8J_1575 1583000 - 1583860 + | hypothetical protein fliQ 1583872 - 1584141 + | flagellar biosynthesis protein FliQ murB 1584138 - 1584914 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1675 1584932 - 1584958 + T 86 -3.2 -6.01187 | ATTTTTCAATATATC TTTAAATTAATT GAT AGTTAATTTTAA TTTTTTTATTTCATT C8J_1578 1585702 - 1584938 - | hypothetical protein cysQ 1586512 - 1585748 - | CysQ TERM 1676 1586558 - 1586585 + r 73 -8.6 -3.27278 | opp_overlap 1586558, overlap 1586538 1586557 AATTATACAAGAAGA TTTTGTGGAATT TTTA ATTTCCACAAAA ATTTTAATTAAATTT TERM 1677 1586585 - 1586558 - R 77 -8.6 -3.54548 | opp_overlap 1586538 1586558 1586557 AATTATACAAGAAGA TTTTGTGGAATT TTTA ATTTCCACAAAA ATTTTAATTAAATTT gltA 1587861 - 1586593 - | citrate synthase TERM 1678 1586908 - 1586926 + g 71 -4.6 -4.83615 | AAGTTTTTTAAGTAC TTTTGCTC TAG GATCAAAA TTTTTATAAACCCTA C8J_1581 1589151 - 1587976 - | sodium/hydrogen exchanger family protein TERM 1679 1589039 - 1589025 - G 77 -7.2 -4.21812 | CCGCACCTAAAATAA TTTCAG TAG CTGAAA GAGGCAAGCGTAAAA bioB 1589968 - 1589132 - | biotin synthase TERM 1680 1589312 - 1589326 + g 70 -8.6 -2.69871 | overlap 1589311 1589317 TGCTACCATTACCAC GCTTTG AGG CAAAGC CTCTTTGGTGTCACG TERM 1681 1589317 - 1589329 + g 84 -9.1 -3.83026 | overlap 1589312 1589311 CCATTACCACGCTTT GAGGC AAA GCCTC TTTGGTGTCACGCAC topA 1592072 - 1589970 - | DNA topoisomerase I TERM 1682 1591353 - 1591367 + g 71 -7.2 -3.80855 | overlap 1591349 TTTGCTTTCAATGTC GCTTAT AGC ATAAGC TTCATTTTTACAAGC TERM 1683 1592206 - 1592192 - H 72 -4.4 -4.92812 | TCATAACAAAATAAA TAAAAT ATA ATTTTA AGTAATTTTAAATAC TERM 1684 1592379 - 1592402 + G 79 -8.2 -3.8766 | TTTCTATGGCCGCTA TGACTATGCT AGGA AGCGTGGTCA TTTCATCTGCTCTGC TERM 1685 1593003 - 1593015 + G 81 -2.7 -5.67967 | overlap 1593004 GGCAATTTTTCCCTA TCTAT TTT ATAGG TTTTTTTATCATGGT TERM 1686 1593099 - 1593077 - g 82 -8.6 -3.94067 | opp_overlap 1593079 1593092, overlap 1593079 TACTATATAGAAGAA CATTTAGGAT TGG ATCCTAAATA TATAGGTATTTCGAT TERM 1687 1593097 - 1593079 - g 77 -9 -3.55061 | opp_overlap 1593079 1593092, overlap 1593077 CTATATAGAAGAACA TTTAGGAT TGG ATCCTAAA TATATAGGTATTTCG TERM 1688 1593079 - 1593097 + G 72 -9 -2.96638 | opp_overlap 1593079 1593077, overlap 1593092 CTATATAGAAGAACA TTTAGGAT TGG ATCCTAAA TATATAGGTATTTCG C8J_1584 1592267 - 1593538 + | major facilitator superfamily protein C8J_1585 1593621 - 1594733 + | hypothetical protein TERM 1689 1594799 - 1594817 + G 74 -6.8 -4.31549 | CTTTTATTTTTGATT TTACCTAT TAT ATGGGTAA TTATTTTAAGTTTTA C8J_1586 1594730 - 1595587 + | hypothetical protein TERM 1690 1596240 - 1596260 + G 78 -6.9 -4.64861 | opp_overlap 1596239 1596238, overlap 1596243 GTTCCCCACAATATT TCACTCCAA CCC TTGGAGTAA TTTCTTTTAAAAACA TERM 1691 1596243 - 1596257 + G 74 -8.6 -3.25598 | opp_overlap 1596239 1596238, overlap 1596240 CCCCACAATATTTCA CTCCAA CCC TTGGAG TAATTTCTTTTAAAA C8J_1587 1595591 - 1596403 + | hypothetical protein TERM 1692 1596454 - 1596401 - f 85 -8.6 -4.46757 | opp_overlap 1596405 1596414, overlap 1596403 1596404 1596414 1596451 AATACAGGCATAAAA TAGCTTGTTAAAACTTATTAGAAT TACATT ATTCTAATAAGTTTTAACAATTTT AAAGGATTTAAAATG TERM 1693 1596452 - 1596403 - f 91 -11.2 -3.83188 | opp_overlap 1596405 1596414, overlap 1596401 1596404 1596414 1596451 TACAGGCATAAAATA GCTTGTTAAAACTTATTAGAAT TACATT ATTCTAATAAGTTTTAACAATT TTAAAGGATTTAAAA TERM 1694 1596451 - 1596404 - f 100 -14.7 -2.8919 | opp_overlap 1596405 1596414, overlap 1596403 1596401 1596414 ACAGGCATAAAATAG CTTGTTAAAACTTATTAGAAT TACATT ATTCTAATAAGTTTTAACAAT TTTAAAGGATTTAAA TERM 1695 1596405 - 1596450 + F 100 -18.2 -4.12942 | opp_overlap 1596404 1596403 1596401 1596414, overlap 1596414 CAGGCATAAAATAGC TTGTTAAAACTTATTAGAAT TACATT ATTCTAATAAGTTTTAACAA TTTTAAAGGATTTAA TERM 1696 1596441 - 1596414 - f 83 -8.7 -4.09511 | opp_overlap 1596405 1596414, overlap 1596404 1596403 1596401 AATAGCTTGTTAAAA CTTATTAGAAT TACATT ATTCTAATAAG TTTTAACAATTTTAA TERM 1697 1596414 - 1596441 + F 83 -8.7 -4.19276 | opp_overlap 1596414 1596404 1596403 1596401, overlap 1596405 AATAGCTTGTTAAAA CTTATTAGAAT TACATT ATTCTAATAAG TTTTAACAATTTTAA TERM 1698 1596485 - 1596468 - g 70 -5.7 -4.26079 | TTAAAGGATTTAAAA TGAAAAA AATA TTTTTCA CCTTAGCTCTTTTTG TERM 1699 1596608 - 1596590 - g 70 -6.1 -4.10717 | GAAAAACTTAAAGAA GATTTTG AAAAA CAAAATC CAGACATAGAAATAA C8J_1588 1596467 - 1596742 + | hypothetical protein TERM 1700 1597477 - 1597459 - g 85 -7.6 -4.69549 | overlap 1597454 AATGCAAAATTAAAA GATTTTTA TAA TAAAAATC CAAATTATACCATTG C8J_1589 1596736 - 1597665 + | hypothetical protein C8J_1590 1597677 - 1598285 + | hypothetical protein TERM 1701 1598870 - 1598883 + G 74 -5.3 -4.90381 | CTCTTTGTGGAAGAT GGAAA GATA TTTCC TTTTCTTCTCTTAAA C8J_1591 1598263 - 1599057 + | hypothetical protein TERM 1702 1599092 - 1599059 - T 100 -19.9 -4.91852 | opp_overlap 1599059 TTCATGAAAAATAAA TTATCCAAGCAGGAA ATTT TTCCTGCTTGGATAA TTTTAAATTACAAAC TERM 1703 1599059 - 1599092 + T 100 -19.9 -4.27316 | opp_overlap 1599059 TTCATGAAAAATAAA TTATCCAAGCAGGAA ATTT TTCCTGCTTGGATAA TTTTAAATTACAAAC secY 1600365 - 1599100 - | preprotein translocase subunit SecY TERM 1704 1599145 - 1599155 + g 70 -4 -4.93898 | opp_overlap 1599145 TTTACTCATATAAAT TTGA GCT TCAA TTTTTCTCATCGTAT rplO 1600757 - 1600365 - | 50S ribosomal protein L15 rpsE 1601205 - 1600762 - | 30S ribosomal protein S5 rplR 1601573 - 1601217 - | 50S ribosomal protein L18 rplF 1602119 - 1601583 - | 50S ribosomal protein L6 rpsH 1602593 - 1602198 - | 30S ribosomal protein S8 rpsN 1602788 - 1602603 - | 30S ribosomal protein S14 rplE 1603335 - 1602790 - | 50S ribosomal protein L5 TERM 1705 1603169 - 1603191 + g 70 -4.3 -4.93696 | gap 1, opp_overlap 1603169, overlap 1603174 GCAATTAAAGAAATA GTATCTGCAA CATT TTGCA-ATAC TTTTTGATCTTTAGC rplX 1603572 - 1603339 - | 50S ribosomal protein L24 TERM 1706 1603462 - 1603472 + g 72 -5.4 -4.70659 | GCATCCTTCAACTAC CACT TTA AGTG TTTTTGGATATACCG rplN 1603940 - 1603572 - | 50S ribosomal protein L14 rpsQ 1604191 - 1603940 - | 30S ribosomal protein S17 rpmC 1604386 - 1604201 - | 50S ribosomal protein L29 TERM 1707 1604309 - 1604329 + g 70 -5.5 -4.24123 | opp_overlap 1604308 CTTTTGTTTTAAAGT GAATAAAAG CAC CTTTTTTTC TTTTAGCATTGTTGC rplP 1604798 - 1604373 - | 50S ribosomal protein L16 rpsC 1605502 - 1604801 - | 30S ribosomal protein S3 C8J_1606 1605945 - 1605502 - | 50S ribosomal protein L22 rpsS 1606237 - 1605956 - | 30S ribosomal protein S19 rplB 1607069 - 1606239 - | 50S ribosomal protein L2 TERM 1708 1606360 - 1606380 + g 76 -9.7 -2.83409 | GAATTTTTCTTACCT TCACCCCCA CCG TGCGGGTGA TCTACTGGGTTCATA rplW 1607352 - 1607071 - | 50S ribosomal protein L23 rplD 1607969 - 1607355 - | 50S ribosomal protein L4 rplC 1608541 - 1607966 - | 50S ribosomal protein L3 rpsJ 1608862 - 1608551 - | 30S ribosomal protein S10 TERM 1709 1608972 - 1609008 + r 95 -9.7 -4.70879 | opp_overlap 1608970 1608998 AATTTGATGAAATTT TTCTATTATTTTCCTTT TAA AAAGGATAAAAATAGAA TTTTTAGAATTTAAA C8J_1613 1609821 - 1609060 - | putative ribosomal pseudouridine synthase TERM 1710 1609515 - 1609500 - G 88 -9 -4.41895 | AATCTGTAAGCAAAA GCAAGC CCTC GCTTGC ATAATCCAATCTACC TERM 1711 1609839 - 1609852 + r 84 -5.9 -5.15969 | opp_overlap 1609839, overlap 1609829 1609827 GATCTTCCTTAAAAA GGGCG TTTT TGCCC TTTTTTACATTACAA TERM 1712 1609852 - 1609839 - R 70 -5.2 -4.57073 | opp_overlap 1609829 1609827 1609839 GATCTTCCTTAAAAA GGGC GTTTTT GCCC TTTTTTACATTACAA C8J_1614 1611845 - 1609857 - | metallo-beta-lactamase family protein TERM 1713 1611668 - 1611685 + gr 75 -7.1 -4.0802 | TTTTCTCAGTTTTAT TTTCTGA GTTT TCAGAAA TTTCCTTGTTGGAAT ksgA 1612620 - 1611820 - | dimethyladenosine transferase TERM 1714 1612012 - 1612034 + g 81 -9.4 -3.55801 | TTTAAAACAGTCTTT TAGAAAATTT TTG AAATTTTCTA TTTCGCAAAGTTCAT TERM 1715 1612627 - 1612672 + H 79 -6.5 -4.89393 | opp_overlap 1612627 TTTAACCATAAGAAA TAATTTTATCTAAAAATTCTT AATT AAGTCTTTTTAGGTAGAATTA TTTTTGTAAAATTTC TERM 1716 1612971 - 1612961 - g 70 -4 -4.88067 | overlap 1612966 ATTTATTTAGAAAAA GAAA ATG TTTC TCGTGAAACAATCAA TERM 1717 1612981 - 1612966 - g 86 -6.2 -5.35224 | overlap 1612961 TTTAGAAAAAGAAAA TGTTTC TCGT GAAACA ATCAAGATCAATTCT C8J_1616 1612700 - 1613236 + | hypothetical protein C8J_1617 1613259 - 1614329 + | radical SAM enzyme, Cfr family C8J_1618 1614326 - 1614421 + | hypothetical protein TERM 1718 1614855 - 1614875 + G 72 -7 -4.10552 | opp_overlap 1614855 1614854 ATTGACTACTTAAAT TGTCAAAA AAAAA TTTTGACA TTTAGTTTAGTAACA C8J_1619 1614426 - 1615454 + | hypothetical protein TERM 1719 1615936 - 1615956 + F 77 -4.9 -5.10665 | opp_overlap 1615936 1615951, overlap 1615931 TTATAAATTCTTAAA TTTTTGATA AAA TATTAAAAA TTTTATTTATTAGGT TERM 1720 1616559 - 1616543 - f 76 -3.8 -5.47399 | CCAATGGGAAAAAAA CTTTTT AAACA AAAAAG AACAAATGAAATATA TERM 1721 1616855 - 1616870 + G 72 -6.2 -4.28653 | opp_overlap 1616855 1616854 ATTCCATATAGGAAT TTTGGT TTTG ACCAAA TATTTTTATTATTCT C8J_1620 1616565 - 1616936 + | hypothetical protein TERM 1722 1617118 - 1617102 - f 82 -10.9 -2.62616 | overlap 1617105 TCAGCTGGGAGAGCA CAACGCT GGC AGCGTTG GGGTCAGCGGTTCAA TERM 1723 1617615 - 1617640 + G 71 -7.7 -3.53444 | gap 1, opp_overlap 1617615, overlap 1617616 AATTTTTGCGAAAAT TTTGCCTTG-GA AAA TCACAAGGCAAG TTTAAGAGCAGATAC TERM 1724 1617616 - 1617639 + G 70 -9 -2.71924 | gap 1, opp_overlap 1617615, overlap 1617615 ATTTTTGCGAAAATT TTGCCTTG-GA AAA TCACAAGGCAA GTTTAAGAGCAGATA C8J_1621 1617258 - 1617788 + | GNAT family acetyltransferase leuD 1618370 - 1617768 - | isopropylmalate isomerase small subunit leuC 1619778 - 1618372 - | isopropylmalate isomerase large subunit leuB 1620847 - 1619771 - | 3-isopropylmalate dehydrogenase leuA 1622379 - 1620844 - | 2-isopropylmalate synthase C8J_1626 1622699 - 1623328 + | hypothetical protein TERM 1725 1623338 - 1623358 + T 73 -8.4 -3.1996 | opp_overlap 1623338, overlap 1623328 GGTTGATTTCATTAA TGCAAGTT ATAAA AACTTGCA TTAGATTAAAATTTA TERM 1726 1623358 - 1623338 - T 73 -8.4 -3.16564 | opp_overlap 1623338 1623328 GGTTGATTTCATTAA TGCAAGTT ATAAA AACTTGCA TTAGATTAAAATTTA C8J_1627 1624008 - 1623364 - | hypothetical protein TERM 1727 1624034 - 1624052 + r 100 -9 -5.1764 | opp_overlap 1624033 CTTATAATAAAATTC GATCTAAA AAA TTTAGATC TTTTTATATTATATA C8J_1628 1624529 - 1624146 - | 7-cyano-7-deazaguanine reductase TERM 1728 1624623 - 1624609 - R 86 -7.2 -4.88495 | opp_overlap 1624619, overlap 1624611 1624614 ATACAGATAAGAAAA TGCAAT TTT ATTGCA ACTCACCCCCTAGCA TERM 1729 1624660 - 1624611 - R 72 -9 -2.69798 | opp_overlap 1624619, overlap 1624609 1624614 1624658 ACAGATAAGAAAATG CAATTTTATTGC-AACTCACCCCC TAGC AAGAGTGAGTTAGCAAT-AAATTG AAGGCAGTTCAAGCC TERM 1730 1624743 - 1624721 - R 70 -8.4 -2.70525 | overlap 1624706 1624720 GGCTTGTAAAGCAAG GCTGCTCCCT TTA AGGGAGCAAA AAACAATATTTTATA C8J_1629 1627333 - 1624775 - | flagellar hook protein FlgE TERM 1731 1625246 - 1625258 + g 76 -7.7 -4.00042 | TTTGATTTGTTGATT TGGTG CGG CACCA TTGTTTGGTGAAAAA ruvC 1628013 - 1627537 - | Holliday junction resolvase