TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.692506 %AT, 1574597 nt, 9242 terms. Intergenic: 0.731244 %AT, H2T: 152328 nt, 1154 terms; T2T: 59781 nt, 1003 terms; H2H: 54349 nt, 967 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|57236892|ref|NC_003912.7| Campylobacter jejuni RM1221, complete genome (length 1777831) dnaA 1 - 1323 + | chromosomal replication initiation protein TERM 1 2094 - 2113 + G 73 -3.7 -5.31275 | opp_overlap 2093 2092 GGAAATGCAAAAACT TTTCTAT GAAAAA ATAGAAA TTTTTTATGATCAAA TERM 2 2478 - 2464 - g 72 -2.8 -5.35721 | overlap 2466 ATAGAAGAAGAAAAA TTCACT TTA AGTGTA AATGAACCTAATTCA dnaN 1483 - 2550 + | DNA polymerase III subunit beta TERM 3 2678 - 2642 - g 79 -7.3 -4.386 | GAAGCTGTTAGAAAA CGCCCAGGTATGTATAT AGG AGATACAAACATAGGCG GACTTCATCATATGA TERM 4 3285 - 3272 - g 74 -5.3 -4.88687 | opp_overlap 3272 TTAAATAAAAAAGAA GCTTT AACT AAAGC AATTTTCTTTAGCGT gyrB 2579 - 4888 + | DNA gyrase subunit B TERM 5 4893 - 4921 + T 100 -10.5 -5.18371 | opp_overlap 4894 4902, overlap 4894 TGGATGTGTAAATTT ATCATTGAAGAAA TGA TTTCTTCAATGAG TTTTGTTTTGTAAGA TERM 6 4894 - 4920 + T 100 -14 -3.69938 | opp_overlap 4894 4902, overlap 4893 GGATGTGTAAATTTA TCATTGAAGAAA TGA TTTCTTCAATGA GTTTTGTTTTGTAAG TERM 7 4920 - 4894 - T 100 -14 -2.64803 | opp_overlap 4894 4893, overlap 4902 GGATGTGTAAATTTA TCATTGAAGAAA TGA TTTCTTCAATGA GTTTTGTTTTGTAAG CJE0004 5255 - 4914 - | hypothetical protein CJE0005 6496 - 5258 - | molybdopterin oxidoreductase family protein TERM 8 5885 - 5903 + g 77 -7.4 -4.31065 | opp_overlap 5884 5886, overlap 5880 5886 AACTCCTCTACTAAT AGGTGAAG TTT CTTCACCA TTTAATTTTGTATCT TERM 9 5902 - 5886 - G 85 -10.9 -3.13522 | opp_overlap 5886 5885 5880, overlap 5884 ACTCCTCTACTAATA GGTGAAG TTT CTTCACC ATTTAATTTTGTATC TERM 10 5886 - 5902 + g 85 -10.9 -3.17012 | opp_overlap 5884 5886, overlap 5885 5880 ACTCCTCTACTAATA GGTGAAG TTT CTTCACC ATTTAATTTTGTATC TERM 11 6433 - 6411 - G 78 -4.2 -5.45802 | TTCTCAAAAGAAAAA TTTGACAATA CAC TAATGCCAAA TAAACCAAGTCCTAT TERM 12 6538 - 6594 + H 73 -5.7 -4.59919 | opp_overlap 6551 6566, overlap 6531 6532 6542 6566 TCTTTTATTTTATTA TAAATTTTAAAAATTTAAATAATTAAT ATA ATTAATTATTTAAATTAAAAAAATTAA TTATTTTTATAATTT TERM 13 6581 - 6551 - H 100 -11.6 -4.72486 | opp_overlap 6532 6542 6538 6566, overlap 6566 TATAAATTTTAAAAA TTTAAATAATTAAT ATA ATTAATTATTTAAA TTAAAAAAATTAATT TERM 14 6900 - 6888 - g 70 -4.1 -4.91084 | AAGAAAATTTAAAAA CAGCT CTT AGCTA TATACTTTTAGGGGC CJE0006 6707 - 8008 + | Na+/H+ antiporter family protein TERM 15 8866 - 8848 - g 78 -9.6 -3.13403 | overlap 8846 GCTTTTCGACTAATA CCTTCCCA AGT TGGGAAAG AGCCCATCCAAACCG TERM 16 9938 - 9928 - g 78 -4 -5.44721 | ATTATTCTAAAAAAA CTTT AGA AAAG GCTTTAGATGAGCTT TERM 17 11019 - 11046 + G 73 -9.2 -2.64416 | opp_overlap 11019, overlap 11010 11018 TTAATGGGCTTTAAA GTCTATCCTTGG ATAG CTAAGGCTAGAC ATTCTACTGCAGGTG TERM 18 12533 - 12519 - g 86 -7.2 -5.28826 | AAATTCGATAAAAAA GACTTT TTT AAAGTC ATGCCAAGAGATTAT gltB 8142 - 12632 + | glutamate synthase, large subunit TERM 19 13038 - 13022 - g 77 -4.5 -5.31275 | TGTGAGCATAAAAAA TAATGAA TTA TCCATTA TAGAAAATGCTTTTA gltD 12642 - 14087 + | glutamate synthase subunit beta rnhB 14663 - 14088 - | ribonuclease HII TERM 20 14696 - 14677 - R 76 -6.4 -4.58685 | opp_overlap 14680, overlap 14680 AAATTTTTCTAAAAA GAAGGGCA AAAA TGCCCTTT TATTCTATTGTGATA TERM 21 14693 - 14680 - R 83 -8.1 -4.40561 | opp_overlap 14680, overlap 14677 TTTTTCTAAAAAGAA GGGCA AAAA TGCCC TTTTATTCTATTGTG TERM 22 14680 - 14693 + r 95 -8.1 -4.92791 | opp_overlap 14680 14677 TTTTTCTAAAAAGAA GGGCA AAAA TGCCC TTTTATTCTATTGTG comEA 14935 - 14696 - | competence protein ComEA rbr 15551 - 15000 - | rubrerythrin ilvD 15807 - 17483 + | dihydroxy-acid dehydratase TERM 23 17478 - 17500 + T 100 -13.6 -3.73611 | opp_overlap 17481, overlap 17481 GCGGTTTTAGATATG GAATGAAAGG TTT CCTTTCATTC TTCTATGTCTTTGGT TERM 24 17481 - 17497 + T 86 -9.5 -3.97694 | opp_overlap 17481, overlap 17478 GTTTTAGATATGGAA TGAAAGG TTT CCTTTCA TTCTTCTATGTCTTT TERM 25 17497 - 17481 - T 78 -9.5 -3.15999 | opp_overlap 17481 17478 GTTTTAGATATGGAA TGAAAGG TTT CCTTTCA TTCTTCTATGTCTTT CJE0015 19209 - 17983 - | hypothetical protein CJE0016 19287 - 19961 + | ExsB TERM 26 19979 - 19950 - T 93 -10.9 -4.01786 | opp_overlap 19949 19948 19946 19945, overlap 19952 AAAGATAAGATTAAA TATAAGTCCTAGT TTTC ACTAGGACTTAAA GCTTAGTTTAAAGTA TERM 27 19977 - 19952 - T 100 -13.5 -3.57873 | opp_overlap 19949 19948 19946 19945, overlap 19950 AGATAAGATTAAATA TAAGTCCTAGT TTTC ACTAGGACTTA AAGCTTAGTTTAAAG CJE0017 21508 - 19982 - | DsbB family disulfide bond formation protein TERM 28 20066 - 20056 - G 74 -5.4 -4.87803 | opp_overlap 20056 CATCTTTAAAGAAAA TGCT TCT AGCA TTAGTGATAGAGCTT TERM 29 20503 - 20522 + g 72 -8 -3.54424 | opp_overlap 20507, overlap 20507 CATTAGGATTTTTTG CAAATCTT AAGA AAGATTTG TTTGAGCCCATAAGA CJE0018 21687 - 21520 - | hypothetical protein TERM 30 21788 - 21761 - R 85 -10.1 -3.66095 | AAATTTTTATTGAAA TTTCACGTTAA GTTAAA TTAACGTGAAA AAAGTTACTGAAAGC CJE0019 23574 - 21793 - | methyl-accepting chemotaxis protein TERM 31 22225 - 22243 + g 76 -8.9 -3.53811 | ATGTTCGCCTGCTCT TGCAGCT TCGAT AGCTGCA TTTAGGGCAAGTAAA TERM 32 23399 - 23384 - G 71 -4.8 -4.73108 | TTGATAAAATTAAAA CTATTT TGAA AAATAG AATTGATTTTTTCAT ccpA-1 24478 - 23564 - | cytochrome c551 peroxidase CJE0021 25420 - 24542 - | fumarylacetoacetate hydrolase family protein CJE0022 26435 - 25533 - | RNA pseudouridylate synthase family protein purB-1 26513 - 27841 + | adenylosuccinate lyase TERM 33 28840 - 28850 + G 72 -5.4 -4.82901 | TTTCCCTGCTTTATG GATC AAT GATC TTTTTATGAAGAGAG nrdA 27857 - 30226 + | ribonucleotide-diphosphate reductase subunit alpha TERM 34 30260 - 30230 - T 76 -7.8 -3.6761 | opp_overlap 30236, overlap 30228 30231 30236 GGTTGCCAATAAATA CTAAAACCCAAT GAAAAAT ATTGGGTTTTAA GAGATTAAGAATTGT TERM 35 30259 - 30231 - T 73 -9.1 -2.80244 | opp_overlap 30236, overlap 30230 30228 30236 GTTGCCAATAAATAC TAAAACCCAAT GAAAAAT ATTGGGTTTTA AGAGATTAAGAATTG CJE0025 31650 - 30265 - | sodium/dicarboxylate symporter thyX 32393 - 31770 - | FAD-dependent thymidylate synthase TERM 36 33650 - 33636 - g 75 -4.3 -5.26907 | opp_overlap 33636 CAAGAGAAAATAAAA TTCCT TTTTT AGGAA TTTGTTTAGGTATGC pyrG 32513 - 34144 + | CTP synthetase TERM 37 34497 - 34477 - g 72 -8.3 -3.27164 | overlap 34479 CAGTAGATAATGGAA TAGCTGCTC TTG AAGCAGCCA AACTCTGTAAAGAAA TERM 38 34495 - 34479 - g 73 -8.7 -3.19511 | overlap 34477 GTAGATAATGGAATA GCTGCTC TTG AAGCAGC CAAACTCTGTAAAGA TERM 39 34820 - 34800 - g 74 -7 -4.30177 | opp_overlap 34812 GATCATATTAACAAA TCTAAAAG GGCTG CTTTTAGA GCTATTAAGCATTAT TERM 40 34980 - 34962 - g 70 -6 -4.21351 | overlap 34945 AAAGATTTTAATAAA GCTTTAGA ATA TCTAGAGC AAATTGTTAGTTTTA recJ 34131 - 35702 + | single-stranded-DNA-specific exonuclease RecJ TERM 41 36449 - 36432 - g 70 -8.5 -3.05384 | overlap 36401 CTCCTTTTGATGTAA GCAAACT CACA AGTTTGC CAAAAGTAGATATTC ansA 35798 - 36793 + | L-asparaginase TERM 42 36838 - 36815 - f 82 -9.7 -3.62518 | opp_overlap 36809 TTAAATATTTCTAAA CTTAGGGAA CTTATC TTCCCTAAG TCAAGCCTTTCAATC TERM 43 37351 - 37329 - f 95 -7.9 -4.99435 | opp_overlap 37329 TCTAATAATTAAAAA GATTAAAAG TTTTT CTTTTAATC TTTCATAACTTTTTC TERM 44 37329 - 37351 + F 79 -7.9 -3.85891 | opp_overlap 37329 TCTAATAATTAAAAA GATTAAAAG TTTTT CTTTTAATC TTTCATAACTTTTTC TERM 45 37379 - 37360 - f 72 -8 -3.31322 | TTTAATCTTTCATAA CTTTTTCT TTGA AGAAAAAG ATTAAACTATCTATA TERM 46 37415 - 37379 - f 77 -5.3 -5.06414 | opp_overlap 37386 TTCTTTGAAGAAAAA GATTAAACTATCTATAA TTT TTATGGAGAGTTTGATC CTGGCTCAGAGTGAA TERM 47 37489 - 37472 - f 70 -8.5 -2.56343 | opp_overlap 37472, overlap 37471 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 48 37472 - 37489 + F 70 -8.5 -2.56596 | opp_overlap 37472 37471 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 49 38877 - 38894 + F 74 -9.1 -3.07291 | opp_overlap 38877 GTCGTAACAAGGTAA CCGTAGG AGAA CCTGCGG TTGGATCACCTCCTT TERM 50 39362 - 39384 + F 82 -7.8 -4.35682 | overlap 39364 TTAATATATATACTT CCTTTAGGTT TTA AACCTAAATG TTCTTTTAATTATCA TERM 51 39364 - 39382 + F 81 -9 -3.76665 | overlap 39362 AATATATATACTTCC TTTAGGTT TTA AACCTAAA TGTTCTTTTAATTAT TERM 52 39980 - 39963 - f 91 -11.3 -3.66803 | opp_overlap 39962 39961, overlap 39956 GCGCAAGAGGGCAAA CCCAGTG CTTG CACTGGG GGTTGTAGGACTGCA TERM 53 42778 - 42788 + F 70 -5.4 -4.57341 | AATAAAGCATCACTT CCTT GTT AAGG TTTTTAAGAAGACTT CJE0030 43241 - 44638 + | hypothetical protein TERM 54 45700 - 45679 - g 85 -7.5 -4.94902 | opp_overlap 45672 45679, overlap 45686 TAATGATGATAAAAA TTTGAAATT TTTA AATTTCAAA AAAATCCCTGATTTT TERM 55 46035 - 46022 - g 72 -5.3 -4.74504 | ATTTTAAGCCAAAAA GAACT CATA AGTTC AAGTGTTTTAGGAAA TERM 56 46790 - 46769 - g 81 -8.1 -4.15881 | AAAGACTATAAAGAA GGCTTTTAC ACAG ATAAAAGCC GCATCAACCAAGAGA TERM 57 46850 - 46834 - g 70 -5.1 -4.57341 | opp_overlap 46834 46836, overlap 46836 AATTTCTTTTAAAAA TTTCTGC TTT GCAGATA AATTTAAAAAAGAAA TERM 58 48416 - 48405 - g 71 -3 -5.22137 | opp_overlap 48405 AACTAGAAAATAAAA TCAA TTCT TTGA CTTATAAACTTTACA CJE0031 44699 - 48472 + | type II restriction-modification enzyme TERM 59 50596 - 50583 - g 71 -3.1 -5.27206 | opp_overlap 50583 GATAGACAATAAAAA CAACA ATAG CGTTG TATCTGCTCAACTTA TERM 60 50701 - 50713 + G 71 -4.8 -4.72272 | GAAAAACTATCACCT GAGC AAATG GCTC TTTTTGATCAAAAAG CJE0032 48472 - 50928 + | hypothetical protein TERM 61 50918 - 50949 + T 71 -5.9 -4.48072 | overlap 50920 GAAAAAATTCCATAG TGCCAAGCTAAGC CTTAAA GCTTAGCTTGAAA TTTTATCATCAGTCT TERM 62 50920 - 50947 + T 70 -8.5 -2.5639 | overlap 50918 AAAAATTCCATAGTG CCAAGCTAAGC CTTAAA GCTTAGCTTGA AATTTTATCATCAGT CJE0033 51659 - 50958 - | hypothetical protein TERM 63 51640 - 51623 - G 70 -6.3 -4.12942 | overlap 51624 TCAAACTTGCCAAAA CTATGGC TAAA GCCATAA AGATATTATTTGTTT CJE0034 52858 - 51656 - | Bcr/CflA subfamily drug resistance transporter TERM 64 53185 - 53174 - g 71 -2.2 -5.35721 | ATAGAACAAGAAAAA CTCA TAAA CGAG CAAGTAAGCCAAAAG TERM 65 53246 - 53222 - g 76 -5.1 -5.1417 | TTAGAAAAGCAAAAA TTTGAACAAGA ACT TCTTATACAAA AGCAAAATTTCCAAA CJE0035 52961 - 54310 + | hypothetical protein TERM 66 54341 - 54299 - T 100 -12.2 -4.34771 | opp_overlap 54304 54305 54307, overlap 54304 GAAAATTTAGCAAAA GATGAGGATTAATTTTGGGC TAA GCCCAAAATTAATCATTCTC CTGGGAAGTGATTTG TERM 67 54304 - 54336 + T 100 -15.1 -3.4072 | opp_overlap 54299 54304, overlap 54305 54307 TTTAGCAAAAGATGA GGATTAATTTTGGGC TAA GCCCAAAATTAATCA TTCTCCTGGGAAGTG TERM 68 54336 - 54304 - T 100 -15.1 -2.96321 | opp_overlap 54304 54305 54307, overlap 54299 TTTAGCAAAAGATGA GGATTAATTTTGGGC TAA GCCCAAAATTAATCA TTCTCCTGGGAAGTG TERM 69 54305 - 54335 + T 100 -18.6 -2.64218 | opp_overlap 54304 54299, overlap 54304 54307 TTAGCAAAAGATGAG GATTAATTTTGGGC TAA GCCCAAAATTAATC ATTCTCCTGGGAAGT TERM 70 54307 - 54333 + T 100 -15.4 -2.86271 | opp_overlap 54304 54299, overlap 54305 54304 AGCAAAAGATGAGGA TTAATTTTGGGC TAA GCCCAAAATTAA TCATTCTCCTGGGAA CJE0036 55377 - 54334 - | cytochrome c family protein CJE0037 56202 - 55555 - | hypothetical protein TERM 71 56130 - 56157 + g 86 -10 -3.74077 | opp_overlap 56130 56131, overlap 56131 GTAAGGCTTCGATAA TGCTTAGGAATT TTAA GATTCCTAAGCG TTTAAGTATATAAAG TERM 72 56156 - 56131 - G 78 -10.6 -2.57881 | opp_overlap 56130 56131, overlap 56130 TAAGGCTTCGATAAT GCTTAGGAAT TTTAAG ATTCCTAAGC GTTTAAGTATATAAA TERM 73 56131 - 56156 + g 85 -11.3 -2.84125 | opp_overlap 56131 56130, overlap 56130 TAAGGCTTCGATAAT GCTTAGGAATT TTAA GATTCCTAAGC GTTTAAGTATATAAA typA 58010 - 56202 - | GTP-binding protein TypA TERM 74 56379 - 56394 + g 70 -6.2 -4.17002 | overlap 56388 ATCGCTTCCACTTGC TCTTAC ATTG GTAAGA TTCTTTCCTTTGATA TERM 75 58224 - 58210 - g 82 -4.3 -5.64421 | AGCTGAAAGAAAAAA TGAAG TTTTG CTTCA AGTTTTAGAGCTTTT CJE0039 58145 - 58468 + | hypothetical protein TERM 76 59693 - 59675 - g 78 -6.2 -4.72272 | TTCTTTGATCAAAAA TTAAATTT TGA AAATTTAA ATAAAACTCAAGTAG CJE0040 58487 - 60277 + | hypothetical protein flgD 60330 - 61214 + | flagellar basal body rod modification protein TERM 77 62476 - 62462 - g 72 -2.8 -5.40474 | AGGCGTCGAAAAAAA TGTAGT TAC ACAACA AGATGGTGTAGCTGA flgE-1 61218 - 62855 + | flagellar hook protein TERM 78 62843 - 62878 + T 75 -8.6 -3.34716 | opp_overlap 62846 62851, overlap 62851 ACAAAAAGCCATTAA TATGAAAAGATAATTC TTAG GAATTATCTTTTTCTA ATTTTTCAAAAATAA TERM 79 62851 - 62870 + T 100 -8 -5.1286 | opp_overlap 62851 62846, overlap 62843 CCATTAATATGAAAA GATAATTC TTAG GAATTATC TTTTTCTAATTTTTC TERM 80 62870 - 62851 - T 83 -8 -4.44797 | opp_overlap 62843 62851, overlap 62846 CCATTAATATGAAAA GATAATTC TTAG GAATTATC TTTTTCTAATTTTTC CJE0043 64730 - 62859 - | hypothetical protein CJE0044 65451 - 64687 - | hypothetical protein TERM 81 65462 - 65488 + H 81 -7.5 -4.58395 | overlap 65464 TTCATATTTTTTCCT TGCGATATAAA TTATT TTTATATCGTA TTTTTAGAGAATAAA TERM 82 65464 - 65486 + H 79 -7.9 -3.90762 | overlap 65462 CATATTTTTTCCTTG CGATATAAA TTATT TTTATATCG TATTTTTAGAGAATA CJE0045 65697 - 65789 + | hypothetical protein TERM 83 66636 - 66654 + T 86 -7.4 -4.85653 | TTTATTACAGCTACA GCTCCAAA TCC TTTGGTGC TTTATTTTCTCTCTC TERM 84 67380 - 67409 + T 100 -13.9 -3.48395 | opp_overlap 67380 67383 67407, overlap 67383 TTAGGATTTTATTAA TAATTTCTAGGAA TTAA TTCCTAGAAATTA TTCTATAAAACCACT TERM 85 67409 - 67380 - T 100 -13.9 -3.17212 | opp_overlap 67380 67383, overlap 67383 67407 TTAGGATTTTATTAA TAATTTCTAGGAA TTAA TTCCTAGAAATTA TTCTATAAAACCACT TERM 86 67406 - 67383 - T 91 -11.2 -3.7282 | opp_overlap 67380 67383, overlap 67380 GGATTTTATTAATAA TTTCTAGGAA TTAA TTCCTAGAAA TTATTCTATAAAACC TERM 87 67383 - 67406 + T 95 -11.2 -3.88232 | opp_overlap 67383 67380, overlap 67380 GGATTTTATTAATAA TTTCTAGGAA TTAA TTCCTAGAAA TTATTCTATAAAACC trmU 68423 - 67407 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 88 68255 - 68273 + g 75 -4.6 -5.14894 | opp_overlap 68255 68256, overlap 68256 68257 68259 AAATATGATAAGGAA TTTGCAAA AAG TTTGCAAC TTTTTCTACTTTTTT TERM 89 68256 - 68272 + g 74 -8.1 -3.65276 | opp_overlap 68255 68256, overlap 68255 68257 68259 AATATGATAAGGAAT TTGCAAA AAG TTTGCAA CTTTTTCTACTTTTT CJE0049 69028 - 68423 - | lysine decarboxylase family protein CJE0050 69307 - 69149 - | hypothetical protein CJE0051 70296 - 69304 - | hypothetical protein CJE0052 70638 - 70366 - | hypothetical protein CJE0053 70880 - 70677 - | hypothetical protein CJE0054 71013 - 71867 + | HmcD domain-containing protein CJE0055 71852 - 72448 + | peptidase family protein fliY 73318 - 72497 - | flagellar motor switch protein FliY fliM 74415 - 73336 - | flagellar motor switch protein FliM fliA 75107 - 74415 - | flagellar biosynthesis sigma factor CJE0059 75444 - 75088 - | hypothetical protein CJE0060 76329 - 75463 - | ParaA family ATPase flhF 77776 - 76322 - | flagellar biosynthesis regulator FlhF TERM 90 77566 - 77584 + g 74 -2.4 -5.52909 | GCGAGCTTTTTTTTG CAGGTAAA GAT TTTCCTTG TTTTTTTAAGTGTTC folK 78259 - 77786 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 91 77903 - 77915 + g 73 -5.5 -4.63542 | opp_overlap 77903 AAGATCTAAATCAAG CGTTC TAG GAGCG TTTTTGAAAGTTCTC TERM 92 78244 - 78210 - G 85 -4.5 -5.52384 | gap 1, opp_overlap 78222 78227, overlap 78211 TTTTGACTAAAAAAA GGAAAAAAACGACTTT TTTC AAAGT-GTTTTACTCC TTGAATTTTTAGCAT aroQ 78741 - 78262 - | 3-dehydroquinate dehydratase TERM 93 79160 - 79141 - g 72 -6.6 -4.09628 | CAGGCCAAAGAAGAA TTAATACT TCAA AGTATTAA AAAAATGCAAAAAAG TERM 94 79346 - 79315 - g 74 -3.2 -5.47159 | opp_overlap 79318 79321, overlap 79318 GTTGAAGATAAAAAA CAAGAATTTTTAAA AAGA TTTGAAAATTCTTT GAAATTTAAAAATGA TERM 95 79318 - 79343 + G 71 -7.1 -3.71649 | opp_overlap 79315 79318, overlap 79321 GAAGATAAAAAACAA GAATTTTTAAA AAGA TTTGAAAATTC TTTGAAATTTAAAAA TERM 96 79343 - 79318 - g 71 -4.9 -4.80737 | opp_overlap 79318 79321, overlap 79315 GAAGATAAAAAACAA GAATTTTTAAA AAGA TTTGAAAATTC TTTGAAATTTAAAAA CJE0064 78832 - 80061 + | chlorohydrolase TERM 97 80937 - 80906 - g 78 -10.4 -2.85621 | overlap 80905 80921 AAGCTTAATCGAAAT CGCTTATAAAACTA ATAG CAGTTTTATAAACG CTAGATAAAATATAT sppA 80049 - 80945 + | signal peptide peptidase SppA, 36K type CJE0066 81097 - 82053 + | hypothetical protein TERM 98 82064 - 82097 + T 81 -5.5 -5.25799 | overlap 82067 CTTAGTCTTTAAGCT TAATGTCCATTTT ATTATTGC AAAATGGACATTC TTTTTCTATTGTTTT TERM 99 82067 - 82094 + T 81 -7.2 -4.65219 | overlap 82064 AGTCTTTAAGCTTAA TGTCCATTTT ATTATTGC AAAATGGACA TTCTTTTTCTATTGT CJE0067 82208 - 82050 - | hypothetical protein TERM 100 83103 - 83063 - R 93 -9.3 -4.90136 | opp_overlap 83063, overlap 83056 83067 83069 83070 AATTAATATTAAAAA TTAAGACTTACTGATTCTA GTA TAGAATCAGTAAATAATAA TATGTGCAATTTGTG TERM 101 83099 - 83067 - R 88 -10.1 -3.87412 | opp_overlap 83063, overlap 83063 83069 83070 AATATTAAAAATTAA GACTTACTGATTCTA GTA TAGAATCAGTAAATA ATAATATGTGCAATT TERM 102 83097 - 83069 - R 100 -12.7 -3.50111 | opp_overlap 83063, overlap 83067 83063 83070 TATTAAAAATTAAGA CTTACTGATTCTA GTA TAGAATCAGTAAA TAATAATATGTGCAA TERM 103 83096 - 83070 - R 100 -14 -2.68982 | opp_overlap 83063, overlap 83069 83067 83063 ATTAAAAATTAAGAC TTACTGATTCTA GTA TAGAATCAGTAA ATAATAATATGTGCA CJE0069 83746 - 83090 - | hypothetical protein TERM 104 83417 - 83438 + g 85 -3.9 -5.75599 | gap 1, overlap 83427 AGATCTTAAATTTTC GATTT-CTTT ATC AAAGCAAATC TTTTTTTCTGCTTTG CJE0070 85178 - 83739 - | iron-sulfur cluster binding protein TERM 105 85055 - 85077 + g 71 -2 -5.41143 | overlap 85060 GCCAGTCTTTAAATC TAGCATCAAT AAC ATTGAGTCTA TTTTTTTGCAAAGTA CJE0071 85915 - 85175 - | hypothetical protein TERM 106 86018 - 85981 - R 78 -6.7 -4.65819 | gap 1, overlap 86007 AAAAGCAAAGTAAAA TTTCTAACAAATATTC TAAAAAC GAATATTTGTT-GAAA TAAAACTTAATTTTT lctP 87722 - 86025 - | L-lactate permease TERM 107 86405 - 86389 - G 78 -3 -5.59962 | gap 1 GAAAAGAAAGAAAAA GCATCAC CTGT GTG-TGC AAAAGCAAGTCCTAA TERM 108 87566 - 87553 - G 76 -6.7 -4.48299 | TTATAGGCAAATAAA GCTAC CAAA GTAGC AAGTATAACAGTTAA TERM 109 87901 - 87876 - R 100 -8.5 -5.30448 | AAATAAATATAAAAA TAGAACAAGAT AAAA ATCTTATTCTA AAGGGGTAGCAGCTG cdtC 88463 - 87894 - | cytolethal distending toxin, subunit C cdtB 89271 - 88474 - | cytolethal distending toxin, subunit B cdtA 90074 - 89268 - | cytolethal distending toxin, subunit A TERM 110 90146 - 90158 + H 70 -3.5 -5.16681 | TAATTTTCCGCTTTT TAAAA ATG TTTTA TTTTGTTGTTTTTAA TERM 111 90391 - 90380 - g 80 -2.2 -5.72622 | overlap 90383 90384 GCGACAAAGAAAAAA GCAC TTTT GTAC TCAAAAATCTTACAC CJE0076 90151 - 90420 + | hypothetical protein cydA 90421 - 91983 + | cytochrome d ubiquinol oxidase, subunit I TERM 112 92191 - 92217 + G 79 -5.1 -5.31275 | overlap 92189 CTCTCGTACTTTTTG GTGGAGCAGCT TTTGC GGCTTTTCCAC TTTTTTATAGTACAA cydB 91983 - 93107 + | cytochrome d ubiquinol oxidase, subunit II CJE0079 93117 - 93221 + | hypothetical protein TERM 113 93277 - 93292 + T 83 -9 -3.85296 | CAAAATATTGCAATT TGCCCA TTTT TGGGCA TCTTTTAATTATAAA CJE0080 93996 - 93301 - | aspartate racemase, putative TERM 114 93354 - 93370 + g 74 -6.7 -4.23207 | overlap 93366 CGTGAATAAGACTTG TATCAAA AAT TTTGATA TTTGTATCATTTTTG ung 94811 - 94116 - | uracil-DNA glycosylase TERM 115 94444 - 94422 - G 72 -8.5 -3.30821 | AAGAATAGAATTTAA GAGCAAAAC TCCTT GTTTTGCCC AAGAGCTTAAATCTC TERM 116 95644 - 95632 - g 77 -7.7 -4.09511 | AAGATGTTCTTAAAA TGGGT AGA ACCCA ACTGCAAGATGCTGT TERM 117 96453 - 96430 - g 70 -5.4 -4.62669 | TAAGTAAAGAACAAA TTGATGAAAT TTTA ACTCCATCAA ATATGCTAAATCCTC aspA 95082 - 96488 + | aspartate ammonia-lyase TERM 118 96533 - 96550 + G 77 -5.5 -4.91459 | opp_overlap 96533 TAATTTTGCAAGTAA TCGTCCT TCTT GGGGCGA TTTTTATCGGTATTC TERM 119 96694 - 96674 - g 76 -9.8 -2.73483 | opp_overlap 96674 ATGTTATTTTAATTA TTGCTGCA GCTAT TGCAGCAA TTTCTGCTATGCAAC TERM 120 96674 - 96694 + G 93 -10.5 -4.0162 | opp_overlap 96674 ATGTTATTTTAATTA TTGCTGCAG CTA TTGCAGCAA TTTCTGCTATGCAAC TERM 121 97508 - 97522 + G 77 -8.6 -3.54768 | opp_overlap 97483 97481 97507 97505 GGGTTAAACAAACCC CTGCTA TGT TAGCAG TTGCATTTTTCTTTG dcuA 96514 - 97842 + | anaerobic C4-dicarboxylate transporter TERM 122 97844 - 97874 + F 79 -4 -5.66868 | opp_overlap 97849, overlap 97849 CTATGCTTATTTAAA TCAAACCCTAGG TTTTTCT CCTAGGGTTAAA TTTTTTTCATTAGTT TERM 123 97869 - 97849 - f 83 -8.3 -4.08485 | opp_overlap 97844 97849 CTTATTTAAATCAAA CCCTAGG TTTTTCT CCTAGGG TTAAATTTTTTTCAT TERM 124 97849 - 97869 + F 77 -8.3 -3.5915 | opp_overlap 97849, overlap 97844 CTTATTTAAATCAAA CCCTAGG TTTTTCT CCTAGGG TTAAATTTTTTTCAT CJE0084 97948 - 99309 + | putative lipoprotein CJE0085 99319 - 99687 + | putative lipoprotein CJE0086 99711 - 100334 + | putative lipoprotein TERM 125 100367 - 100387 + F 90 -5.4 -5.77632 | GAATAAAATTTTTTA GCTCAAGT GTTTA GCTTGGGC TTTTTTTATGATTTT TERM 126 101005 - 100988 - g 76 -6.3 -4.64334 | opp_overlap 100988 AATTTCTTAATAAAA CTATGAC AAAT GCCATAG GTTCTATGAGTGGAC CJE0087 100417 - 101754 + | hypothetical protein TERM 127 101787 - 101810 + G 73 -9 -3.17229 | overlap 101788 AATTAAAATTCTTTT TTTAGGCTTA TTTT TAAGCCTAAG TCTTAATGCTAAAGT TERM 128 101788 - 101809 + G 78 -10.3 -2.50016 | overlap 101787 ATTAAAATTCTTTTT TTAGGCTTA TTTT TAAGCCTAA GTCTTAATGCTAAAG CJE0088 101764 - 102966 + | hypothetical protein TERM 129 102969 - 103000 + F 72 -7.5 -3.72494 | opp_overlap 102969 102968, overlap 102970 102974 TCTAGGCTTTTAAAT TTTTAGAGTTTGA TTTTTC TCAAACTCTAAAC TCTTTCTTAAATTCA TERM 130 102970 - 102999 + F 84 -11 -2.82773 | opp_overlap 102969 102968, overlap 102969 102974 CTAGGCTTTTAAATT TTTAGAGTTTGA TTTTTC TCAAACTCTAAA CTCTTTCTTAAATTC rplU 103125 - 103433 + | 50S ribosomal protein L21 rpmA 103444 - 103698 + | 50S ribosomal protein L27 TERM 131 103699 - 103730 + F 100 -13.2 -3.89617 | opp_overlap 103699, overlap 103692 GTATATCCTGCATAA GTTTTTAGGACGCT TTTT AGCGTCTTGAAAAC TTTAAATTTATAAAT TERM 132 103730 - 103699 - f 77 -8.8 -3.30771 | opp_overlap 103699 103692 GTATATCCTGCATAA GTTTTTAGGACGCT TTTT AGCGTCTTGAAAAC TTTAAATTTATAAAT obgE 103805 - 104857 + | GTPase ObgE TERM 133 104855 - 104893 + F 90 -7.6 -5.02074 | opp_overlap 104854 104845 104857 104861 AAAATTTTAACAATC TAGGAAGTGTTTTATATT AAA AATTTCAAACACTCCCTA TTTTTTCAAAAATAA TERM 134 105399 - 105413 + G 76 -2.8 -5.58454 | TAATGATAGTTTAAG TGCTTA TGC TACGCA TTTTTTTGATGTGGA proB 104962 - 105717 + | gamma-glutamyl kinase fmt 105791 - 106708 + | methionyl-tRNA formyltransferase CJE0094 106671 - 107324 + | biotin--protein ligase CJE0095 107321 - 108106 + | ParA family chromosome partitioning ATPase CJE0096 108112 - 108948 + | ParB family chromosome partitioning protein TERM 135 109040 - 109054 + G 76 -2.8 -5.50499 | overlap 109042 109043 ATCCTTCCATAATGC TTGCTA CTA TAGCTA TTTTTTTGGCTATGA CJE0097 109009 - 109434 + | F0F1 ATP synthase subunit B' TERM 136 109665 - 109655 - g 89 -4 -5.89947 | overlap 109644 GAAATTCAAAAAAAA CTTT TAG AAAG TAAAGCTAAGAAATT TERM 137 109795 - 109785 - g 72 -5.4 -4.71791 | opp_overlap 109785 ATATTAAGAAAGAAA CTCA AGA TGAG TTAGATTTACTTCAA CJE0098 109445 - 109957 + | F0F1 ATP synthase subunit B TERM 138 110348 - 110338 - g 82 -4 -5.52096 | opp_overlap 110338, overlap 110331 AAACTTAACAAAAAA TTTG ATG CAAA TATTAAACTAAATAA atpH 109960 - 110481 + | F0F1 ATP synthase subunit delta atpA 110495 - 112000 + | F0F1 ATP synthase subunit alpha TERM 139 112058 - 112046 - g 80 -6.3 -4.88326 | AAAGAAAAATTAAAA GTGTT CAT AACAC TCAAAAGACTACAAA atpG 112009 - 112893 + | F0F1 ATP synthase subunit gamma atpD 112919 - 114316 + | F0F1 ATP synthase subunit beta TERM 140 114628 - 114613 - g 82 -4 -5.50499 | overlap 114615 TGAGATTGAAAAAAA TCTTGC TCAA GCAAAA GATTTGATTAAATCT atpC 114320 - 114709 + | F0F1 ATP synthase subunit epsilon CJE0104 114709 - 115263 + | MotA/TolQ/ExbB proton channel family protein CJE0105 115272 - 115661 + | TonB system transport protein ExbD, putative CJE0106 115664 - 116443 + | TonB domain-containing protein tolB 116453 - 117661 + | translocation protein TolB CJE0108 117738 - 118235 + | peptidoglycan-associated lipoprotein Omp18 TERM 141 118257 - 118276 + G 83 -8.6 -4.13995 | opp_overlap 118253 118260 AAAAAAATATTCACA GTAGCTCT TCTT GGAGCTAC TTTACTTTATGCAGA TERM 142 118904 - 118883 - g 75 -5.9 -4.84761 | AGATGTTGATAAAAA TGCTTTTGA AGAT TCCAAAGCA AAATTAAATTTTCTC CJE0109 118239 - 119186 + | hypothetical protein slyD 119201 - 119770 + | FKBP-type peptidyl-prolyl cis-trans isomerase SlyD TERM 143 120278 - 120292 + G 71 -8.6 -2.74799 | overlap 120277 120280 GACAAATCGTTGTAG CAGGTT TAA AACCTG ATTTAGCAAGTTATG fabD 119770 - 120690 + | malonyl CoA-acyl carrier protein transacylase mtnA 120687 - 121376 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 144 122004 - 121990 - g 82 -5 -5.47821 | ACTCAGCGAAAAAAA TGTGAA ATT TCCACA CGCTAGAGAAGAAGC CJE0113 121373 - 122128 + | PP-loop family protein CJE0114 122133 - 122654 + | pyrazinamidase/nicotinamidase, putative CJE0115 122654 - 123268 + | hypothetical protein CJE0116 123265 - 123672 + | putative metalloprotease CJE0117 123796 - 124485 + | hypothetical protein dusB 125436 - 124510 - | tRNA-dihydrouridine synthase B TERM 145 124793 - 124805 + g 74 -6.3 -4.44461 | CCTATCATGAGTCCA TCACA TTT TGTGA TTTTATAAACTTCTT TERM 146 125395 - 125375 - G 81 -8.3 -4.33675 | ACTACATTACGAAAA GGCAGATCT GAA AAACCTGCC ATAGGGGCTAAAAAC CJE0119 126419 - 125433 - | hypothetical protein TERM 147 125920 - 125934 + g 85 -3.6 -5.79588 | TAGGCATAATTTGCA TCATTT TTG AGATGA TTTTTTTCATTTTGC CJE0120 126771 - 126409 - | dnaK suppressor protein, putative TERM 148 126744 - 126760 + g 89 -3.8 -6.07969 | CTTCTAAAATATTTT TGAAAT TTTGT ATTTCA TTTTTTTTCATTTTA CJE0121 127244 - 126783 - | hypothetical protein accD 128076 - 127234 - | acetyl-CoA carboxylase subunit beta TERM 149 127782 - 127797 + g 71 -3.2 -5.28826 | overlap 127784 TACCTGTTTTACTTT CACCTT CGCT AAGGCG TTTTTTATAGGATTT CJE0123 128807 - 128085 - | inositol monophosphatase family protein CJE0124 131026 - 128807 - | OMP85 family outer membrane protein tyrA 131103 - 131930 + | prephenate dehydrogenase CJE0126 132010 - 133383 + | M24/M37 family peptidase lpxC 133383 - 134267 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase CJE0128 134306 - 134707 + | hypothetical protein TERM 150 135461 - 135474 + G 91 -4.5 -5.96894 | TGAGCACACTTTCAG GTTCG GGAT CGAGC TTTTTTTCTTTAGCT thrB 134716 - 135594 + | homoserine kinase CJE0130 135619 - 135876 + | hypothetical protein TERM 151 135974 - 135960 - g 88 -8.6 -4.41494 | GACTTGGAATTAAAA CAGCAT CAA ATGCTG TAGAACCTGAGATTG infB 135863 - 138478 + | translation initiation factor IF-2 TERM 152 138625 - 138639 + G 73 -3.6 -5.28683 | overlap 138627 TACGATGCTTTTGTG TATCTT GAT AAGATG TTTTTTAATGTTCAT rbfA 138475 - 138837 + | ribosome-binding factor A CJE0133 138827 - 139249 + | hypothetical protein CJE0134 139354 - 141342 + | McrBC restriction endonuclease system, McrB subunit, putative TERM 153 141408 - 141396 - g 71 -4.9 -4.71418 | AAGATTTAAAAGAAA TTTTC AAA GAAAA GGCCGAAGGGTTTTA TERM 154 141594 - 141581 - g 79 -5.3 -5.29782 | GATAGTTATAAAAAA GAAGA TAGT TCTTC AAATCATGACAAAGA CJE0135 141335 - 142666 + | hypothetical protein CJE0136 143458 - 142655 - | cation ABC transporter, permease protein TERM 155 143369 - 143353 - G 78 -4.4 -5.38047 | CAGCCATAGAAAAAA GGCGAT TTATC ATCACC AAAGTGCCTATGATC TERM 156 143470 - 143492 + r 86 -6.5 -5.20154 | overlap 143461 GCATTATTTTCCTTT GAAAATTTT AAACA AAAATTTTC TTTTTTAAATTCTGT CJE0137 144305 - 143451 - | cation ABC transporter, ATP-binding protein TERM 157 143551 - 143562 + g 82 -4.4 -5.52384 | TGTTCGCATAGTTTT TTGC TATC GCAA TTTTTTTCATCGCAA TERM 158 143927 - 143939 + g 71 -4.9 -4.7629 | TTAGAGAATCAATGG TTTTG TTC CAAAA TTTTTCCATTCCTAC CJE0138 145208 - 144318 - | cation ABC transporter, periplasmic cation-binding protein TERM 159 144506 - 144517 + g 70 -4.4 -4.93547 | GAGTGATAAGTTTTT GCAA ATCT TTGC TTTTTGGTTCCTTGC TERM 160 145328 - 145298 - H 78 -4.3 -5.30616 | opp_overlap 145311, overlap 145311 145315 TTATTTAAATAAAAA TAATAAATATAAA TTAAT TTAATATTTATTA AATGAAATTTTTTAT TERM 161 145436 - 145399 - H 70 -5.3 -4.65747 | gap 1, opp_overlap 145394 145409 TAATTCTTAAGAAAA TTTAGCATT-ATTTTATA TTT TATAAAATTAATGTTAAA AGTTCTTTTACAAAA TERM 162 145508 - 145525 + G 70 -4.2 -5.00138 | overlap 145522 TAAAACTTTCTGTTA TTGCAA ATTCAA TTGCAA TTTTTGCTTTAAGTA CJE0139 145477 - 145806 + | hypothetical protein TERM 163 146880 - 146865 - g 72 -6.2 -4.28049 | GTTAAAATGCTAAAA CAAAGT TCAG ACTTTG CTAATGCCTTAGCTA CJE0140 145824 - 147446 + | methyl-accepting chemotaxis protein TERM 164 147454 - 147482 + F 100 -12 -4.90917 | opp_overlap 147451 147454 GGTTTTAATTAATCA TTTATACCTAGT AAAAA ACTAGGTATAAA TTTTTCCTTCAATTT TERM 165 147482 - 147454 - f 88 -12 -2.84098 | opp_overlap 147454, overlap 147451 GGTTTTAATTAATCA TTTATACCTAGT AAAAA ACTAGGTATAAA TTTTTCCTTCAATTT CJE0141 147581 - 149362 + | hypothetical protein TERM 166 149392 - 149370 - T 100 -12.2 -5.33026 | opp_overlap 149374 GAAGCTAAATAAAAA TAAAGTTGCT TTT AGCAACTTTA TAAAATCTTAATGCA TERM 167 149374 - 149388 + T 82 -8.6 -3.92602 | opp_overlap 149370 CTAAATAAAAATAAA GTTGCT TTT AGCAAC TTTATAAAATCTTAA trxB 150338 - 149400 - | thioredoxin-disulfide reductase TERM 168 150465 - 150449 - R 93 -10.9 -3.95725 | opp_overlap 150449 AATTTTTAAGAAGAA GGCTAGT TAT ACTAGCC TTTAGTTTATAGTAA TERM 169 150449 - 150465 + r 93 -10.9 -4.16182 | opp_overlap 150449 AATTTTTAAGAAGAA GGCTAGT TAT ACTAGCC TTTAGTTTATAGTAA trx 150786 - 150472 - | thioredoxin CJE0144 151181 - 150843 - | hypothetical protein hom 152428 - 151181 - | homoserine dehydrogenase TERM 170 152148 - 152161 + g 85 -2.3 -6.04324 | AGCATAGCTTTATTT GCAGT AACA ACAGC TTTTTTCTTTTTTAA CJE0146 153634 - 152432 - | aspartate aminotransferase TERM 171 152929 - 152955 + g 76 -6.6 -4.49311 | overlap 152931 CCGCTATATCTTTTG CGCCTTCAATTT CCA AAATAGAAGGAG TTTTATAGTCATCAT TERM 172 153168 - 153155 - G 70 -3.9 -5.07107 | opp_overlap 153147 TAAATTTTCAAAAAA TTGAT TTTC ATCAA GCTCAAATTTTTCAT CJE0147 154452 - 153646 - | hypothetical protein CJE0148 155384 - 154446 - | hypothetical protein CJE0149 156060 - 155377 - | RNA methyltransferase CJE0150 156898 - 156074 - | tetrapyrrole methylase family protein rpmE 157101 - 156901 - | 50S ribosomal protein L31 CJE0152 157836 - 157180 - | hypothetical protein CJE0153 158245 - 157838 - | hypothetical protein TERM 173 157983 - 157972 - G 70 -4.4 -4.88295 | AAACAAAGTGAAAAA TTGC TAAG GCAA AAATTAAGATCCAAG CJE0154 158670 - 158245 - | cytochrome c family protein CJE0155 159251 - 158670 - | 6-pyruvoyl tetrahydrobiopterin synthase-like protein CJE0156 159991 - 159248 - | radical SAM domain-containing protein moaA 160956 - 159994 - | molybdenum cofactor biosynthesis protein A TERM 174 160562 - 160575 + g 74 -3.1 -5.34555 | AATACATCTTTTTGC GCAAG AGTT TTTGC TTTTTTGTGATCTAG CJE0158 161484 - 160969 - | hypothetical protein CJE0159 161978 - 161481 - | hypothetical protein TERM 175 161807 - 161780 - G 75 -7.2 -4.14392 | overlap 161782 161801 TTTCAAGCCTTAAAA TATCTTCTTTTA GACT TAAAAGAAGATC AAAAATAATTTTTTC TERM 176 161805 - 161782 - G 83 -9.8 -3.67 | overlap 161780 161801 TCAAGCCTTAAAATA TCTTCTTTTA GACT TAAAAGAAGA TCAAAAATAATTTTT ubiA 162853 - 161969 - | prenyltransferase TERM 177 163183 - 163170 - g 74 -5.3 -4.9181 | opp_overlap 163170 AGAGAATATCAAAAA GCAAA AGAA TTTGC TTTAGCTAGAAATTT miaA 162924 - 163793 + | tRNA delta(2)-isopentenylpyrophosphate transferase CJE0162 164342 - 163779 - | hypothetical protein TERM 178 164695 - 164654 - R 75 -8.3 -3.41745 | gap 1, opp_overlap 164651 164650 164669, overlap 164656 164669 TTTGTAGAATACGAA TAGCTTTTGATATAAGTCTA TTA TAGACTTATATCAAG-GCTG GGCATTATTGAGCTG TERM 179 164693 - 164656 - R 85 -10.9 -3.27771 | gap 1, opp_overlap 164651 164650 164669, overlap 164654 164669 TGTAGAATACGAATA GCTTTTGATATAAGTCTA TTA TAGACTTATATCAAG-GC TGGGCATTATTGAGC CJE0163 164882 - 164700 - | hypothetical protein TERM 180 164989 - 164976 - H 71 -2.5 -5.46629 | opp_overlap 164976 164982 164984, overlap 164949 164963 AATATTTCAAAAAAA TATAA TTTT TTATA ATATATTTAAATTAT TERM 181 164984 - 165023 + H 78 -9.8 -3.17334 | opp_overlap 164976 164991, overlap 164976 164982 164991 165007 AAAAAAATATAATTT TTTATAATATATTTAAAT TATT ATTAAAATATATTATAAA TGTATCTTAATTTAG sodB 165146 - 165808 + | superoxide dismutase, Fe TERM 182 165831 - 165815 - T 82 -8.7 -3.92716 | opp_overlap 165815 GTAAAATAATTTAAA GGCATCA AAA CGATGCC TTTTTTACTCTCCTA TERM 183 165815 - 165831 + T 100 -8 -5.23316 | opp_overlap 165815 GTAAAATAATTTAAA GGCATC AAAAC GATGCC TTTTTTACTCTCCTA CJE0165 167041 - 165836 - | saccharopine dehydrogenase TERM 184 167102 - 167090 - R 74 -4.9 -5.01042 | opp_overlap 167061 167060 AATTTAAACTAAAAA TTGAT AAT ATCAA AACTTATTTTCTCTT CJE0166 167991 - 167083 - | iron ABC transporter, ATP binding subunit TERM 185 167167 - 167154 - G 100 -2.5 -6.34616 | opp_overlap 167157 CCAAAATAAAAAAAA TTATA TTTT TATAA AGTAATTTTAGCCTA CJE0167 169591 - 167975 - | iron ABC transporter, permease protein TERM 186 168126 - 168102 - G 70 -6.5 -4.13654 | opp_overlap 168103, overlap 168098 CTTGCAAACCAGAAA GCTTTAACACT TAA AGTTTCAAAGC CAAAAGGTGCTAAAA TERM 187 168435 - 168424 - G 71 -2.2 -5.36364 | CCAAAAATACAAAAA GCAC TATA ATGC TAATCCCTAAAGCAG TERM 188 168537 - 168507 - G 83 -3.4 -5.77856 | overlap 168498 AATAAATTAAAAAAA TGATTTTTAACTAT CCT AGAGCTAAACATCA AAAAATAAGCTAAAA TERM 189 169560 - 169543 - G 84 -7 -5.24551 | GTAAAGCAAGAAAAA GGGCAA GTAAAA TTGCCC CGAGTTTATAGTATT CJE0168 170595 - 169591 - | iron ABC transporter, periplasmic iron-binding protein CJE0169 170815 - 170606 - | hypothetical protein CJE0170 170945 - 171796 + | TonB-dependent colicin lipoprotein, putative TERM 190 173326 - 173314 - g 76 -7.7 -3.96497 | overlap 173311 TTAAAACCAGAACAA GCCAA TAC TTGGC AAATAGGTTTTAATT CJE0171 171793 - 174060 + | TonB-dependent colicin receptor protein, putative TERM 191 174076 - 174092 + G 74 -2.4 -5.55001 | GGAATATACAAATGT TAAAAA AAATA TTTTTA TTTTGTTTTTTATTG TERM 192 174552 - 174565 + G 85 -8.1 -4.41844 | opp_overlap 174552, overlap 174564 TTGCTTGCGAGCATA GGTGC TAGC GCACC TTTTATAGGGCTTTT exbB-1 174072 - 174833 + | TonB system transport protein ExbB CJE0173 174820 - 175230 + | biopolymer ExbD/TolR family transporter CJE0174 175232 - 175978 + | TonB-dependent colicin receptor protein, putative TERM 193 176000 - 175976 - f 81 -5.2 -5.09895 | TATTTAGGTAAAAAA TAAACTTTTC ATTAA AAAAAGTTTA TTAGAATTTTTATTT TERM 194 176872 - 176848 - g 90 -10.1 -3.96842 | opp_overlap 176855 176864, overlap 176855 ACTTGAATATAACAA TCAAAAAGCTG AAG CAGCTTTTAGA AAAGAGCTTGTTTAT TERM 195 176855 - 176865 + G 72 -6.8 -4.07687 | opp_overlap 176848 176855, overlap 176864 TATAACAATCAAAAA GCTG AAG CAGC TTTTAGAAAAGAGCT TERM 196 176865 - 176855 - g 83 -6.8 -5.01845 | opp_overlap 176855 176864, overlap 176848 TATAACAATCAAAAA GCTG AAG CAGC TTTTAGAAAAGAGCT CJE0175 176030 - 177229 + | putative transporter CJE0176 177400 - 178686 + | transporter, putative TERM 197 178687 - 178698 + T 79 -5.8 -4.96845 | opp_overlap 178687, overlap 178684 AAAGATGAAGAATAA GCCT CTTT AGGC TTTATTTCTTTTTGT CJE0177 179884 - 178700 - | Ser/Thr protein phosphatase family protein TERM 198 179519 - 179537 + g 91 -5.4 -5.80364 | overlap 179521 GATGATATATCCATT TTTTTTAG CTT CTAAAAGA TTTTTTTCTTGACAT TERM 199 179686 - 179716 + g 73 -9.3 -2.55019 | gap 1, opp_overlap 179689 179690, overlap 179685 179689 179690 GCATACGCATTTCTA GAAG-TTTGAGTAA AATT TTACTCAAATCTTC ATCATTTTTAACATT TERM 200 179711 - 179690 - G 70 -8.9 -2.58663 | opp_overlap 179689 179686 179685 179690, overlap 179689 ACGCATTTCTAGAAG TTTGAGTAA AATT TTACTCAAA TCTTCATCATTTTTA TERM 201 179690 - 179711 + g 74 -8.9 -3.26718 | opp_overlap 179690 179689, overlap 179689 179686 179685 ACGCATTTCTAGAAG TTTGAGTAA AATT TTACTCAAA TCTTCATCATTTTTA CJE0178 180103 - 179894 - | PhnA domain-containing protein CJE0179 180815 - 180096 - | TerC family integral membrane protein purN 181453 - 180887 - | phosphoribosylglycinamide formyltransferase TERM 202 181353 - 181374 + g 74 -2.3 -5.63504 | overlap 181349 181354 ATGCAAAGTACTACT TCATAGG TATTTTCC CCTATGG TTTTTTTATGAAGTT CJE0181 182814 - 181444 - | hypothetical protein TERM 203 181745 - 181729 - G 72 -6.7 -4.10007 | ATAATTTTGTGAAAA TTTTCTA GCA TAGAAAA AGCGATTTTTTTGCA CJE0182 183496 - 182798 - | hypothetical protein CJE0183 185003 - 183498 - | Mg chelatase-related protein def 185527 - 185000 - | peptide deformylase TERM 204 185540 - 185573 + r 100 -11.3 -5.00884 | opp_overlap 185548 CATTAAAAAACCTTT GTTTTAAATGATCTC CAAA GAAATCATTTAAAAC TTTTTTCCAAAACCT clpP 186147 - 185563 - | ATP-dependent Clp protease proteolytic subunit TERM 205 185863 - 185848 - G 74 -5.4 -4.9445 | ACAACTAAGCAAAAA TGCTCC CATA GAAGCA GCTTGTCCTATGCAA tig 187481 - 186147 - | trigger factor TERM 206 186623 - 186636 + g 70 -3.9 -5.02715 | CATCATTTACAAGTT TGAAA AGTT TTTCA TTTTTGATTTGCTCT TERM 207 187526 - 187506 - H 77 -4.7 -5.18371 | opp_overlap 187506, overlap 187501 CCTTATAAAATAAAA TTTGCCTTC AAT GATAGCAAA TTTTTCCTTATTACT folE 187625 - 188197 + | GTP cyclohydrolase I fliI 188197 - 189582 + | flagellum-specific ATP synthase purF 190922 - 189585 - | amidophosphoribosyltransferase TERM 208 190093 - 190109 + g 70 -3.7 -5.08824 | opp_overlap 190092 190093, overlap 190082 190095 ACAGGCACGACAAAG TCTGCTT TAT AAGCAAA TTTTTTAGCTAAAGC TERM 209 190874 - 190862 - G 75 -5.5 -4.8048 | GTTGCATAGCAAAAA GCGCA TAA TACGC ATAAGTGCTAGCATT dapB 191652 - 190924 - | dihydrodipicolinate reductase CJE0191 192896 - 191715 - | recombination factor protein RarA TERM 210 192734 - 192720 - G 76 -8.6 -3.49077 | opp_overlap 192728, overlap 192715 TTCATAAAAATCTAA GCCAAA TTC TTTGGC TACAACTCTAGCAAA CJE0192 194023 - 192896 - | hypothetical protein TERM 211 193862 - 193873 + g 72 -4.4 -5.05782 | AAAACTTCCTTTAGA GGTT AAAA AACC TTTTTTGAAGTAAAT TERM 212 194160 - 194126 - R 73 -8.8 -2.93073 | opp_overlap 194130 194136, overlap 194136 TTTGCCGAAGAATGA TTTTTATAAATCCCTT GTT AAGGGATTTATATTAA TAAGCTTTTTTATAA TERM 213 194130 - 194156 + r 100 -14 -3.23611 | opp_overlap 194126 194136, overlap 194136 CCGAAGAATGATTTT TATAAATCCCTT GTT AAGGGATTTATA TTAATAAGCTTTTTT TERM 214 194136 - 194150 + r 85 -8.6 -4.23674 | opp_overlap 194126 194136, overlap 194130 AATGATTTTTATAAA TCCCTT GTT AAGGGA TTTATATTAATAAGC TERM 215 194150 - 194136 - R 82 -8.6 -3.88559 | opp_overlap 194136 194130, overlap 194126 AATGATTTTTATAAA TCCCTT GTT AAGGGA TTTATATTAATAAGC CJE0193 194504 - 194157 - | hypothetical protein CJE0194 195208 - 194603 - | hypothetical protein CJE0195 195500 - 195177 - | hypothetical protein TERM 216 195596 - 195608 + H 83 -3.5 -5.97979 | opp_overlap 195596, overlap 195588 ATAATTATAGCAAAA TAATT CAA AATTA TTTTTTTATTCTTGT TERM 217 197115 - 197131 + H 70 -5.2 -4.62069 | overlap 197106 GAACTTTTGATTTTT CAATGA TTGGT TCATTG TTTTATGATATTTTT TERM 218 198201 - 198224 + G 74 -6.2 -4.37527 | opp_overlap 198207, overlap 198207 ATATAGACCTTTCTT TAAAAAGTAT TTTT ATACTTTTTG TTTTAATGGTTGTGG TERM 219 198207 - 198218 + G 78 -3 -5.50723 | opp_overlap 198207, overlap 198201 ACCTTTCTTTAAAAA GTAT TTTT ATAC TTTTTGTTTTAATGG CJE0197 197273 - 199267 + | OPT family oligopeptide transporter TERM 220 199272 - 199287 + F 81 -9 -3.80858 | overlap 199274 AAGATGCTTAATTTT TGGGGT TAAA ACCCCA TTTAATCCATTCTGA CJE0198 199341 - 200144 + | undecaprenol kinase, putative TERM 221 200254 - 200238 - f 74 -7.3 -3.9398 | TTAGAACTTTATAAA CACTCAC AGG GTAAGTG AGCGACAAAGGGTTA TERM 222 201134 - 201120 - g 70 -3.6 -5.06089 | overlap 201122 AAACTATAAAGAAAA TATGTA TTT TACACA AATTGATGAACAAGA TERM 223 201699 - 201685 - g 85 -2.8 -5.98781 | opp_overlap 201697 GATAATGAAAAAAAA CAACCT GTA ATGTTG CATCGTGCGATTTTA thrS 200275 - 202083 + | threonyl-tRNA synthetase TERM 224 202467 - 202489 + G 76 -7.6 -3.90291 | opp_overlap 202466 AAAGGACGTGAAATG GCAACTCCTG AAG CAGGTGTAGC TTTGCTTGAAAAAAT infC 202080 - 202598 + | translation initiation factor IF-3 TERM 225 202584 - 202627 + F 83 -8.2 -4.4267 | opp_overlap 202592 202593, overlap 202593 202620 AATATGCTTGTAACT CCTAAAAAGGCTTAATCCAC TTTT GTGGATAAGGCTTTTAAAGG TTTTAAATTTTGAAA TERM 226 202593 - 202618 + F 83 -8.3 -4.19276 | opp_overlap 202592 202593, overlap 202584 GTAACTCCTAAAAAG GCTTAATCCAC TTTT GTGGATAAGGC TTTTAAAGGTTTTAA CJE0201 202637 - 203728 + | D12 class N6 adenine-specific DNA methyltransferase CJE0202 203768 - 203869 + | hypothetical protein TERM 227 203855 - 203869 + GF 75 -7.2 -4.12188 | GATCCAAAGTTATTT TCAAGA ATA TCTTGA TTTTGCCAGTAATAA CJE0203 203805 - 203918 + | hypothetical protein CJE0204 203958 - 204083 + | hypothetical protein CJE0205 204203 - 204649 + | hypothetical protein CJE0206 204813 - 205043 + | hypothetical protein CJE0207 205106 - 205345 + | hypothetical protein CJE0208 205424 - 205606 + | hypothetical protein CJE0209 205882 - 205700 - | hypothetical protein CJE0210 205926 - 206042 + | hypothetical protein CJE0211 206043 - 206246 + | pathogenicity domain-containing protein TERM 228 206352 - 206372 + F 75 -7.7 -4.08216 | TACCCCAAATGTTGT TTTTTCTCA TAA TGAGGAAAA TTTTGCCCAGAGTGG CJE0212 206505 - 206687 + | pathogenicity protein,-like protein CJE0213 207315 - 207115 - | hypothetical protein CJE0214 207469 - 207564 + | hypothetical protein CJE0215 207610 - 208239 + | phage repressor protein, putative CJE0216 208320 - 208640 + | hypothetical protein CJE0217 208650 - 208844 + | hypothetical protein CJE0218 208992 - 208876 - | hypothetical protein TERM 229 209049 - 209067 + G 76 -6.7 -4.40358 | TGCAACTAAAGAATG CATGGGC GAAGA GCCTATG TTTTATGCAATAACT TERM 230 209210 - 209164 - g 81 -8.5 -4.29073 | gap 2, opp_overlap 209179, overlap 209160 209166 GAAGAATGCAATAAA GATTTTAGCAAAGAAGCTCTAAA GTT TTTA-AGCT-CTTTGCTAAAATA AAAGAGAGTATTTTT TERM 231 209208 - 209166 - g 91 -11.1 -3.73097 | gap 2, opp_overlap 209179, overlap 209160 209164 AGAATGCAATAAAGA TTTTAGCAAAGAAGCTCTAAA GTT TTTA-AGCT-CTTTGCTAAAA TAAAAGAGAGTATTT CJE0219 209029 - 209211 + | hypothetical protein TERM 232 209231 - 209214 - T 100 -8.5 -5.07652 | opp_overlap 209214 TTTGCTAAAATAAAA GAGAGTA TTTT TACTCTC TTAGCTTTTAAAAAT TERM 233 209214 - 209231 + T 75 -8.5 -3.37091 | opp_overlap 209214 TTTGCTAAAATAAAA GAGAGTA TTTT TACTCTC TTAGCTTTTAAAAAT dam 210054 - 209239 - | DNA adenine methylase TERM 234 209377 - 209343 - G 71 -6.7 -3.92143 | gap 1, opp_overlap 209342 TAAAATCTTTATAAA GCTTTCTTATAA-GCT CACA ATCATTATAAGAAAGC ATAAATTTACCCTTG TERM 235 209934 - 209911 - G 70 -8.2 -3.10901 | opp_overlap 209909 209907, overlap 209909 AAAGACTTCAATATA GCTTTTATGC TCAG GCATTAAAGC AATGATTTCTTTAGC TERM 236 210105 - 210085 - R 100 -9.1 -5.52347 | opp_overlap 210085 AATAAAATTAAAAAA GCTTTGCTT TAA AAACAAAGC TATAATGCTTTTGCT TERM 237 210152 - 210135 - R 74 -5.5 -4.83615 | TAGTTTTTAGAAAAA GGAAGGC TTTA GTCTTCC TTGCCATTCTTGCTA TERM 238 210200 - 210171 - R 79 -10.3 -3.02144 | overlap 210183 210184 CCATTCTTGCTAACA CTTTTTGAAAAAT TGCG ATTTTCCAAAAAG TCGCATCACTAAAGA CJE0221 210744 - 210256 - | phage virion morphogenesis protein, putative CJE0222 212964 - 210748 - | TP901 family tail tape measure protein TERM 239 212779 - 212809 + g 70 -5.6 -4.25754 | TTGAGCTTTTAATTC CGCTCTTAAATT GGCATTG AGTTTAAGAGTG TTTAATTCTTTTTGC TERM 240 213293 - 213274 - g 70 -5.2 -4.62069 | TTGCTATTTTAAAAA TTTATTTT TTGA AAAATAAA ACAATCAAAAACTCT CJE0223 212985 - 213311 + | hypothetical protein CJE0224 213396 - 213298 - | hypothetical protein CJE0225 213662 - 213423 - | hypothetical protein CJE0226 214324 - 213815 - | phage major tail tube protein, putative CJE0227 215544 - 214351 - | major tail sheath protein TERM 241 215564 - 215576 + r 80 -2 -6.12458 | CACTCCTTATTTCTT TACA TTTTT TGTA TTTTTTGTTTTTTTA CJE0228 216568 - 215555 - | hypothetical protein TERM 242 216513 - 216526 + g 73 -8.1 -3.47955 | ACTATAGGTTCACTT GGCTC TTTT GAGCC TTGATTAATATTTGG CJE0229 217039 - 216668 - | hypothetical protein CJE0230 217542 - 217036 - | hypothetical protein CJE0231 218631 - 217552 - | tail fiber protein H, putative CJE0232 219251 - 218631 - | phage tail protein, putative TERM 243 218948 - 218932 - G 71 -2.2 -5.47399 | TTAACTTTAAAAAAA TAAGGC TTTCC GCCATA ATTAAACCACTCTTT CJE0233 220414 - 219248 - | baseplate assembly protein J, putative TERM 244 220083 - 220101 + g 75 -7.5 -4.05033 | TCTACTTTAGCTGTG GGCTTAA CCCCT TTAAGCC TTTGTATCAAATAGC CJE0234 220692 - 220411 - | baseplate assembly protein W, putative CJE0235 220889 - 220698 - | hypothetical protein TERM 245 220829 - 220819 - G 76 -5.4 -5.03314 | TTTAGGTTTAAAAAA GCAT AAA ATGC CCCCATGCAAAAGAG CJE0236 221530 - 220898 - | baseplate assembly protein V, putative CJE0237 221844 - 221530 - | hypothetical protein TERM 246 221737 - 221761 + g 81 -4.5 -5.4756 | overlap 221733 TGTAAATTTACCTTT TAAATTAAG AGCTTTG CTTAATTTA TTTTTTGTTACAATT CJE0238 221969 - 221847 - | hypothetical protein CJE0239 222192 - 221956 - | putative lipoprotein CJE0240 222542 - 222201 - | hypothetical protein TERM 247 222293 - 222338 + g 76 -7.9 -3.93984 | overlap 222292 222291 222299 AAACCTTATCCACTT TTAAAACTTCTTTTAAAGTCT CTTT GGGCTTTAAATCAAGTTTTAA TTTATCAATAGCTTT TERM 248 222405 - 222450 + g 70 -3.6 -5.1287 | gap 1, opp_overlap 222448 TTCATTGTTAAAATG CAAAGCTTTAAGTTTTAGA TTTTCATTT TCTAAAGCT-AAAGCATTG TTTTTTAAATATAAA CJE0241 222942 - 222553 - | hypothetical protein CJE0242 223182 - 223009 - | hypothetical protein CJE0243 223091 - 223525 + | hypothetical protein TERM 249 224218 - 224228 + G 70 -5.4 -4.65895 | opp_overlap 224218 GTAAGGATTTAGAAG GCTT TAA AAGC TTTTTAGATACCAAG CJE0244 223527 - 224342 + | Mu-like prophage I protein, putative CJE0245 224507 - 224872 + | hypothetical protein CJE0246 224875 - 225852 + | hypothetical protein TERM 250 225900 - 225862 - f 100 -13.5 -3.53184 | opp_overlap 225859 225859, overlap 225885 225886 GAGTAAAACGCACAA TTTTAGCTTTAAAGGCA AAAAA TGCTTTTAAAGCTAAAA AGATATTAGAAAAAG CJE0247 226028 - 226426 + | hypothetical protein CJE0248 226419 - 227018 + | hypothetical protein TERM 251 227163 - 227149 - g 70 -3.6 -5.1101 | GGATGAGCTAAAAAA TGAATT AAA AACTCA ATTTTTGCATGAAAG TERM 252 228494 - 228512 + G 71 -2.4 -5.47218 | opp_overlap 228511 GAGAGTTTAAGCCTT GCTTTTGA AAA TGAAGAGC TTTTTTTACATAAAA TERM 253 228583 - 228607 + G 86 -7.1 -5.06414 | opp_overlap 228578 228581 AGGGAAAAATGATGA TGCACCTGATA GCT TAGCAGGAGCA TTTTTATTAGCAAGA CJE0249 227105 - 228688 + | phage uncharacterized protein CJE0250 228698 - 230068 + | hypothetical protein TERM 254 230822 - 230808 - g 76 -2.8 -5.55855 | GCTAAAAAAACAAAA GAAGTT AAA AGCTTC ACTCATCAAAAAGAA CJE0251 230070 - 231308 + | prophage MuSo1, F protein, putative TERM 255 231756 - 231772 + G 81 -9.5 -3.62864 | TTGTAGATGGAAGTG GCTTTGT AGC ACAAAGC TTTAGCATGGATTTA CJE0252 231434 - 231808 + | phage tail protein, putative CJE0253 231801 - 231992 + | tail protein X, putative CJE0254 231986 - 232963 + | tail protein D, putative CJE0255 233244 - 232960 - | DNA-binding protein, putative dns 233338 - 234009 + | extracellular deoxyribonuclease TERM 256 233990 - 234012 + T 79 -9.3 -3.5936 | opp_overlap 233990, overlap 233993 ATGAGAAAGAAAAAA GAATTAGAG CATTA CTCTAATTC TTTGCAAACTTTAGC TERM 257 234012 - 233990 - T 100 -10 -5.73978 | opp_overlap 233990 233993 ATGAGAAAGAAAAAA GAATTAGAGC ATT ACTCTAATTC TTTGCAAACTTTAGC CJE0257 234276 - 234001 - | hypothetical protein CJE0258 234772 - 234323 - | hypothetical protein TERM 258 234523 - 234533 + g 74 -3.2 -5.42198 | TTTTTGTAGCCCTTC CGCT TTT AGTG TTTTCTTTTTTAAAA CJE0259 235461 - 234769 - | hypothetical protein TERM 259 235377 - 235389 + g 72 -4.9 -4.96848 | CTTTTGGTGTTTTGG CTTTA AAA TAAAG TTTTTCTATAACCAC CJE0260 235730 - 235461 - | hypothetical protein CJE0261 236689 - 235727 - | hypothetical protein CJE0262 237184 - 236798 - | hypothetical protein CJE0263 237453 - 237181 - | hypothetical protein TERM 260 237318 - 237290 - G 95 -10.6 -4.10164 | opp_overlap 237287 237290 237297, overlap 237297 TCATCATTAGACAAA TTAGAAAGAATA GCTCT TATTCTTTCTAA TGGCTTGATATCCTT TERM 261 237290 - 237318 + g 85 -11.3 -2.59458 | opp_overlap 237290 237297, overlap 237287 237297 TCATCATTAGACAAA TTAGAAAGAATAG CTC TTATTCTTTCTAA TGGCTTGATATCCTT TERM 262 237493 - 237475 - R 70 -7.6 -3.53012 | opp_overlap 237479 237490, overlap 237489 237490 TCCTTTTGTTTTAAA TTAAGTTT TAA AAACTTAA TCAAATCCGCCTTAG TERM 263 237521 - 237489 - R 81 -7.2 -4.62872 | gap 1, opp_overlap 237490 237495 237498, overlap 237475 237490 237499 ATTAAGTTTTAAAAA CTTAATCAAATCCGC CTTA GCGGACTTG-TTAAA TTCTTTTAAGTCTAA TERM 264 237520 - 237490 - R 75 -8.5 -3.37 | gap 1, opp_overlap 237490 237495 237498, overlap 237475 237489 237499 TTAAGTTTTAAAAAC TTAATCAAATCCGC CTTA GCGGACTTG-TTAA ATTCTTTTAAGTCTA TERM 265 237495 - 237516 + r 75 -8.7 -3.37556 | opp_overlap 237490 237489 237499, overlap 237490 237498 TTTTAAAAACTTAAT CAAATCCGC CTTA GCGGACTTG TTAAATTCTTTTAAG TERM 266 237512 - 237499 - R 79 -8.1 -4.00683 | opp_overlap 237498 237495 237490, overlap 237490 237489 AAAAACTTAATCAAA TCCGC CTTA GCGGA CTTGTTAAATTCTTT CJE0264 237696 - 237517 - | hypothetical protein CJE0265 238178 - 237693 - | host-nuclease inhibitor protein Gam, putative CJE0266 238626 - 238285 - | hypothetical protein TERM 267 238651 - 238661 + r 82 -6.8 -4.77216 | TTTTTGATGATTTTA GGGT TTT ACCC TTTTTAAGTCTTCTT CJE0267 238907 - 238722 - | hypothetical protein CJE0268 239094 - 238891 - | hypothetical protein CJE0269 240020 - 239097 - | bacteriophage DNA transposition protein B, putative CJE0270 242162 - 240090 - | bacteriophage DNA transposition protein A, putative CJE0271 242362 - 242162 - | hypothetical protein TERM 268 242200 - 242210 + g 78 -6.8 -4.66163 | CATTAATGATGCCGA GCTC TAA GAGC TTTTTAAATACCGCT TERM 269 242379 - 242396 + H 86 -7.1 -4.98128 | opp_overlap 242379 TTTTCTCCTTCAATA CTTCAAT TTTA ATTGAAG TTTATTTTTAATTGT CJE0272 242507 - 243139 + | transcriptional regulator, putative CJE0273 243155 - 244132 + | hypothetical protein TERM 270 244180 - 244207 + F 76 -6.5 -4.59773 | opp_overlap 244180, overlap 244185 AGGTTTGTAGAAAAA TAAAATTTCCA CTTTTA TGGAAGTTTTA TTTTTCCAAATGGAA TERM 271 244207 - 244180 - f 71 -5 -4.83169 | opp_overlap 244180 244185 AGGTTTGTAGAAAAA TAAAATTTCCAC TTTT ATGGAAGTTTTA TTTTTCCAAATGGAA TERM 272 244210 - 244223 + F 81 -5.3 -5.26119 | opp_overlap 244219 TATGGAAGTTTTATT TTTCC AAAT GGAAA TTTTATTTTTCCGCC TERM 273 244445 - 244480 + F 76 -3.6 -5.46706 | opp_overlap 244470, overlap 244470 AATGCTAATTTAAGA TATAGTTTTTAAATAA AAAA TAATTTAAAAATTGTA TTTTTATTTTAAGCT argC 244537 - 245565 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 274 245833 - 245823 - g 71 -2.4 -5.40625 | AGATCATAGAAAAAA GGGC ATA GCGC ACGAGATGACAAAAT CJE0276 245575 - 246021 + | acetyltransferase TERM 275 246721 - 246707 - g 71 -5.8 -4.36127 | overlap 246700 TTGAACAAGCTAAAA TTTTAG CTC CTAAAA TAGAAGGTGGTATGC argB 246031 - 246870 + | acetylglutamate kinase argD 246880 - 248061 + | acetylornithine aminotransferase pcm 248710 - 248081 - | protein-L-isoaspartate O-methyltransferase CJE0280 248799 - 249347 + | hexapaptide repeat-containing transferase CJE0281 250686 - 249316 - | nicotinate phosphoribosyltransferase TERM 276 249467 - 249482 + g 88 -4 -5.72622 | opp_overlap 249467 ATAGTATTTAAAGAT GACTTT TTAA GAAGTC TTTTTTCTTTGTAGA TERM 277 250453 - 250441 - G 72 -4.9 -4.95854 | TAAAAAATCTAAAAA TTTTG TAT CAAAA ATACCTTGTTTTCTT nrdF 251698 - 250676 - | ribonucleotide-diphosphate reductase subunit beta TERM 278 251673 - 251685 + g 72 -2.7 -5.34381 | GTTTCGTTTGAGTTT GGATT GTA AATTC TTTTTCTTTGCATTT CJE0283 252123 - 251701 - | hypothetical protein TERM 279 251956 - 251940 - G 90 -7.3 -5.40072 | overlap 251942 TTTTTGTTAAAAAAA TAGCTTG AAT CAAGCCA AATAAAAAAGTACAT TERM 280 251954 - 251942 - G 79 -7.7 -4.34482 | overlap 251940 TTTGTTAAAAAAATA GCTTG AAT CAAGC CAAATAAAAAAGTAC pyrE 252732 - 252124 - | orotate phosphoribosyltransferase frr 253292 - 252735 - | ribosome recycling factor secG 253679 - 253308 - | preprotein translocase subunit SecG TERM 281 253782 - 253755 - R 72 -6.4 -4.24002 | opp_overlap 253750 253756, overlap 253756 TTTGAAACTTGAAAA GTTTTTGTGAGA AAAA TCCCACAAAAAT TTATCTGCTATTGAA TERM 282 253781 - 253756 - R 81 -9.9 -3.13919 | opp_overlap 253756 253750, overlap 253755 TTGAAACTTGAAAAG TTTTTGTGAGA AAAA TCCCACAAAAA TTTATCTGCTATTGA TERM 283 253756 - 253781 + r 75 -7.7 -4.13591 | opp_overlap 253755 253756, overlap 253750 TTGAAACTTGAAAAG TTTTTGTGAGA AAAA TCCCACAAAAA TTTATCTGCTATTGA CJE0287 254478 - 253783 - | hypothetical protein TERM 284 253862 - 253851 - G 70 -5.8 -4.3341 | opp_overlap 253850 CAAAATCAAGATAAA GTGC TACT GCAC CTTCGATTGGAGTTT TERM 285 253954 - 253933 - G 71 -5.9 -4.43392 | opp_overlap 253946, overlap 253953 GTAAAATGAAAATAA TATTGCAGC TACT GCTGAAATA GCTAGATTAACTATA cynT 254639 - 255274 + | carbonic anhydrase CJE0289 255271 - 257154 + | mechanosensitive ion channel family protein TERM 286 257180 - 257144 - T 90 -11.9 -3.24414 | opp_overlap 257152, overlap 257145 257152 ATTTGCAAGCAAAAG CTATAAAATAGCAAGAT TTT ATCTTGCTATTTTTTAA ACCGGCATAACGCGT TERM 287 257179 - 257145 - T 100 -13.2 -2.54166 | opp_overlap 257152, overlap 257144 257152 TTTGCAAGCAAAAGC TATAAAATAGCAAGAT TTT ATCTTGCTATTTTTTA AACCGGCATAACGCG TERM 288 257152 - 257172 + T 100 -11.3 -5.00616 | opp_overlap 257152 257145 257144 GCAAAAGCTATAAAA TAGCAAGAT TTT ATCTTGCTA TTTTTTAAACCGGCA TERM 289 257172 - 257152 - T 95 -11.3 -4.54477 | opp_overlap 257152, overlap 257145 257144 GCAAAAGCTATAAAA TAGCAAGAT TTT ATCTTGCTA TTTTTTAAACCGGCA CJE0290 258148 - 257177 - | NifU family protein CJE0291 259339 - 258158 - | cysteine desulfurase TERM 290 259356 - 259378 + r 71 -2.9 -5.61913 | gap 1 TTAAAATCCTTAATT TATCCTTAAT TTTA ATTA-GGATA TTTTTTATCTTTATT TERM 291 259868 - 259882 + r 72 -7.2 -3.8186 | overlap 259865 AGTTCTTTATGTTGA TGATCT AAA AGATCA TTATTCATTGAAATA CJE0293 261217 - 260051 - | hypothetical protein TERM 292 261531 - 261519 - g 71 -7.7 -3.43773 | overlap 261517 TCGCACAGCTAAATA TGTGC ATA GCACA AATGTAAAAGCTGTT rpmI 261376 - 261567 + | 50S ribosomal protein L35 TERM 293 262000 - 261986 - g 76 -6.4 -4.56597 | CTGCTTTTGCAAAAA TTGCAG AGG CCGCAA AAAAAGCACTTTGAT rplT 261661 - 262014 + | 50S ribosomal protein L20 TERM 294 262024 - 262062 + T 93 -6.3 -5.28683 | opp_overlap 262031, overlap 262016 262025 262028 CTTTGATTTTTTAGT GTAAGAATTTCAAGA TTTTTGATT TCTTGAAATTCTTAA TTTTTTAGTATTAAT TERM 295 262025 - 262061 + T 83 -9.8 -3.75583 | opp_overlap 262031, overlap 262016 262024 262028 TTTGATTTTTTAGTG TAAGAATTTCAAGA TTTTTGATT TCTTGAAATTCTTA ATTTTTTAGTATTAA TERM 296 262028 - 262058 + T 71 -7.1 -3.9735 | opp_overlap 262031, overlap 262016 262025 262024 GATTTTTTAGTGTAA GAATTTCAAGA TTTTTGATT TCTTGAAATTC TTAATTTTTTAGTAT CJE0296 262555 - 262073 - | hypothetical protein TERM 297 262454 - 262472 + g 71 -3.2 -5.20328 | TTTTTCATAATCTTT TTTTATAG CTT CAATAAAA TTTGTTTTTTTAAGC TERM 298 262673 - 262657 - H 70 -5.1 -4.6391 | opp_overlap 262659, overlap 262659 AATAATTACATAAAA CTTCAAC CGC GTTGATG GATTGAAAGGTTTTT CJE0298 263633 - 264490 + | hypothetical protein TERM 299 264492 - 264508 + F 82 -10.9 -2.62024 | opp_overlap 264492, overlap 264488 ACAAAGAAGATTAAA GAGCCTT TTT AAGGCTC TAAATTGTAGTGATG TERM 300 264508 - 264492 - f 93 -10.9 -4.05319 | opp_overlap 264488 264492 ACAAAGAAGATTAAA GAGCCTT TTT AAGGCTC TAAATTGTAGTGATG CJE0299 264521 - 264997 + | hypothetical protein CJE0300 266276 - 264966 - | major facilitator superfamily protein CJE0301 266436 - 266260 - | hypothetical protein moaC 266529 - 267002 + | molybdenum cofactor biosynthesis protein C CJE0303 266980 - 267243 + | hypothetical protein TERM 301 267593 - 267577 - g 76 -6.7 -4.43392 | overlap 267568 267574 TGAAAATCAAAAGAA TTTGATT AAA AATCAAA TCAGCGATAATTTTT TERM 302 267619 - 267639 + G 70 -4.1 -4.92783 | overlap 267626 TTTTTTTGAATTCGA GAATATTTT ACA AGAATGTTC TTTTTGTGATGAATT CJE0304 267257 - 268393 + | hypothetical protein TERM 303 268414 - 268391 - T 100 -11.2 -5.03747 | opp_overlap 268389 268394 268408 AAATTCGTTAAAAAA TAATATCCCA TTTT TGGGATATTA AATATCTATTTCTAT TERM 304 268394 - 268411 + T 73 -8.5 -3.20326 | opp_overlap 268391, overlap 268389 268408 TTCGTTAAAAAATAA TATCCCA TTTT TGGGATA TTAAATATCTATTTC xth 269191 - 268412 - | exodeoxyribonuclease III TERM 305 269261 - 269247 - H 70 -2.2 -5.47821 | ATCCATTTAAAAAAA TTCAAT AAA ATTAAA AGCTTAAATTTGAAG TERM 306 269456 - 269467 + G 71 -3 -5.19261 | GTGATTTGCTCTTTG CTTT TTAT AAAG TTTTTTACTAAATTT TERM 307 269937 - 269951 + G 70 -5.8 -4.3129 | opp_overlap 269937 269935 GAGAAAACAATCACA CTAAAA AAC TTTTAG TTTTGGTGGTGGGTG TERM 308 270320 - 270308 - g 73 -3.5 -5.27335 | CCTTTTAAAGAAAAA TTAAA TCA TTTAA GTGATCAAAATATAA CJE0306 269288 - 270826 + | sulfatase, putative TERM 309 271126 - 271138 + G 71 -3.3 -5.27938 | GCAGTGTTTTTTAGT GTGCT TTT AGCTC TTTTTGTTTGGGGCT dgkA 270823 - 271179 + | diacylglycerol kinase TERM 310 271368 - 271358 - g 91 -5.4 -5.88565 | opp_overlap 271360, overlap 271359 271360 TTTAGAAGAAAAAAA GCTT TTT AAGC GTCTTAAAAATGGAT CJE0308 271176 - 271403 + | hypothetical protein TERM 311 272260 - 272233 - gf 79 -8 -3.88464 | overlap 272238 TGAAAAATATTCAAA TGAAACAAATTT GCAA AAATTTATTTCA GATAATGCTTGCAAA pyrC 271412 - 272407 + | dihydroorotase TERM 312 272592 - 272609 + GT 70 -3.5 -5.03314 | overlap 272594 TAGAGGTGCTCCGGA TTTTTTG ATTA CAAAAGA TTTTTTAACACTAGG TERM 313 273182 - 273198 + GT 72 -5.1 -4.68994 | AATCATTTCCATTAA TCCGTTC TAT GAGTGGA TTTTTAGATGATAGT TERM 314 273996 - 273977 - gT 70 -5.8 -4.29905 | gap 1, overlap 273981 ATGAGATCAAAATAA GCTATGGTT TAG AACCA-AGC AAAGCAAATCTTAAT TERM 315 274136 - 274119 - gT 85 -3.5 -5.81622 | AGAAAATGAAAAAAA TCCAAAA TGGC TTTTAGA TGATTATGTAAAATT TERM 316 274201 - 274221 + GT 75 -5.5 -4.68994 | GAAAGTGGAATTTTT GCTTTTATT TCA AATAATAGC TTTTTAGATAATCCT TERM 317 274341 - 274327 - gT 87 -3.5 -5.89659 | AGAAAAAAAGAAAAA GCTCC TGATG GAAGC AAAGATGATAATGTC TERM 318 275155 - 275145 - gT 70 -4 -4.98672 | overlap 275152 CTCAAAAATAGAAAA TTTC AAA GAAA GCTTTAGAACTTTCA CJE0310 272329 - 275679 + | D12 class N6 adenine-specific DNA methyltransferase, putative TERM 319 275699 - 275666 - T 95 -9.9 -4.71482 | gap 1, opp_overlap 275672 275697 ATGAAATTTCAAAAA TCAATC-TTAGCTAGT ATA ACTAGCTAATGATTAA AAGTTTTATCTTGGC TERM 320 275672 - 275692 + T 83 -11.3 -2.75229 | opp_overlap 275666 TTTCAAAAATCAATC TTAGCTAGT ATA ACTAGCTAA TGATTAAAAGTTTTA CJE0311 276398 - 275685 - | hypothetical protein TERM 321 276447 - 276471 + r 79 -10.1 -2.84098 | opp_overlap 276431 276447, overlap 276444 276452 CATAAATTTTTAAAA TTCAAGCCC AAAGAAA GGGCTTGAA TGATTAATTAAAACC TERM 322 276471 - 276447 - R 90 -10.1 -4.18161 | opp_overlap 276444 276447 276452, overlap 276431 CATAAATTTTTAAAA TTCAAGCCC AAAGAAA GGGCTTGAA TGATTAATTAAAACC CJE0312 278467 - 276479 - | methyl-accepting chemotaxis protein TERM 323 277045 - 277060 + g 72 -6.2 -4.28049 | TAGCTAAGGCATTAG CAAAGT CTGA ACTTTG TTTTAGCATTTTAAC TERM 324 277786 - 277796 + g 74 -3.2 -5.4756 | opp_overlap 277782, overlap 277782 CGTTAGCAATATTAA CGCT TAA AGTG TTTTTTGTTAAAATT TERM 325 278079 - 278089 + g 78 -4 -5.37043 | ATTTGTTTTGTAATG TCAA AAT TTGA TTTTTTATCTAAAAT TERM 326 279035 - 279009 - g 73 -6 -4.68424 | overlap 279029 TAAGCGAGTTAAAAA TTTGTCCCTT GCCCCAA AAAGGACAAA ATCCTCCGAAATTTC CJE0313 278663 - 279538 + | zinc transporter ZupT TERM 327 279629 - 279605 - T 90 -10.1 -4.18161 | opp_overlap 279605 279602 279610, overlap 279589 CATAAATTTTTAAAA TTCAAGCCC AAAGAAA GGGCTTGAA TGATTAATTAAAACC TERM 328 279605 - 279629 + T 79 -10.1 -2.84098 | opp_overlap 279589 279605, overlap 279602 279610 CATAAATTTTTAAAA TTCAAGCCC AAAGAAA GGGCTTGAA TGATTAATTAAAACC CJE0314 281616 - 279637 - | methyl-accepting chemotaxis protein TERM 329 280203 - 280218 + g 72 -6.2 -4.28049 | TAGCTAAGGCATTAG CAAAGT CTGA ACTTTG TTTTAGCATTTTAAC CJE0315 282326 - 281817 - | hypothetical protein CJE0316 282835 - 282326 - | hypothetical protein TERM 330 282523 - 282545 + g 73 -3.6 -5.23016 | overlap 282521 CAAAAATTTTAGCTG TAATTTTACA TTC TTTAAAATTA TTTTTTGAATTATTT TERM 331 282793 - 282781 - G 86 -2.7 -6.10295 | TGAAGAGAAAAAAAA CTAAT AAA ATCAG CATATAATCTACTAA CJE0317 283957 - 282869 - | SPFH domain-containing protein TERM 332 283909 - 283919 + g 91 -4 -6.09888 | TGTTTCCGTTATTGT TAGA ATT TCTA TTTTTTTTATTGAAA ilvE 284884 - 283970 - | branched-chain amino acid aminotransferase CJE0319 285060 - 285266 + | 4-oxalocrotonate tautomerase family protein CJE0320 285263 - 285718 + | anti-oxidant AhpCTSA family protein CJE0321 285718 - 286809 + | hypothetical protein TERM 333 286858 - 286872 + F 72 -4.4 -5.07971 | opp_overlap 286868, overlap 286868 AATTTTTAATGATTT TTTTAT ATA ATAAAA TTTTTAATTGTTTTC fabZ 286903 - 287343 + | (3R)-hydroxymyristoyl-ACP dehydratase lpxA 287343 - 288134 + | UDP-N-acetylglucosamine acyltransferase clpX 288127 - 289350 + | ATP-dependent protease ATP-binding subunit mreB 289361 - 290401 + | cell shape-determining protein MreB CJE0326 290391 - 291140 + | rod shape-determining protein MreC TERM 334 291663 - 291641 - g 75 -4.2 -5.19212 | AGTATTATTAAAAAA GAAAAAATTG ATG CAATTTTGCC AACTATGGGTGGACA TERM 335 291827 - 291810 - g 88 -5.6 -5.54894 | AATGTATGAAAAAAA TTGGCA TGGATT TGCCAA AATCGATGTATGCGT TERM 336 293500 - 293479 - g 70 -3.8 -5.12617 | gap 1 CAATCAGCCAAAAAA TTCTACTGC AACAA GC-GTAGAA GAAGCGGTTCTTAAG TERM 337 293833 - 293817 - g 70 -3.7 -5.17353 | ATATCGATGAAAAAA TGCAAGA ATT TATTGCA CAAAAAACCGCAGAT carB 291401 - 294670 + | carbamoyl phosphate synthase large subunit TERM 338 295046 - 295012 - g 74 -8.8 -3.31726 | overlap 295010 295013 295024 GTTGCCGATATAATA CTTGATGAGAAATTTT TCG AAAATATCCCATCAAA AATATTAAAACTTTC TERM 339 295045 - 295013 - g 76 -10.1 -2.58822 | overlap 295012 295010 295024 TTGCCGATATAATAC TTGATGAGAAATTTT TCG AAAATATCCCATCAA AAATATTAAAACTTT CJE0328 294667 - 295089 + | hypothetical protein tal 296067 - 295090 - | transaldolase serB 296690 - 296067 - | phosphoserine phosphatase SerB cheW 297211 - 296690 - | purine-binding chemotaxis protein CheW cheA 299525 - 297216 - | chemotaxis protein CheA TERM 340 299035 - 299057 + g 71 -7 -3.93953 | opp_overlap 299035 299033 299036, overlap 299033 299036 CTTAATTGATTAACA TCTACTTCAG GTT CTGGAGTAGC TATTTCTTGTTTTGG TERM 341 299036 - 299056 + g 79 -10.5 -2.94745 | opp_overlap 299036 299035 299033, overlap 299035 299033 TTAATTGATTAACAT CTACTTCAG GTT CTGGAGTAG CTATTTCTTGTTTTG cheV 300485 - 299529 - | chemotaxis protein CheV CJE0334 301113 - 300478 - | hypothetical protein TERM 342 300863 - 300849 - G 72 -2.8 -5.41143 | opp_overlap 300849 GAGGTGGTAAAAAAA TATCTC CGT GAGCTA ATTTTATAAAAGCAT greA 301731 - 301246 - | transcription elongation factor GreA lpxB 302837 - 301743 - | lipid-A-disaccharide synthase TERM 343 302235 - 302219 - G 81 -7.3 -4.58685 | opp_overlap 302219 302221 AAAGTTCTTTAAAAA TAGGCAT TAA ACGCCTA ATTTCACTACGCCTT TERM 344 302392 - 302382 - G 70 -4 -5.00616 | GCTTTTGTTAAAAAA TTGA TTA TCAA AGGGCAAAATAGAAG TERM 345 302926 - 302907 - R 89 -10.8 -3.69283 | opp_overlap 302911 GAAGTTATGGAAGAA TACACGCT AAAA AGCGTGTA TGAAGATTTATTCTC CJE0337 303686 - 302934 - | major antigenic peptide PEB3 TERM 346 303823 - 303785 - H 91 -9.9 -4.37971 | opp_overlap 303784 303785, overlap 303787 AAAATATTATTAAAA TCTAACTTTTGCTTG GTATTTTTG CAAGCAAAAGTTAAA ATTGTTATTGATGCT TERM 347 303821 - 303787 - H 78 -10.3 -2.51609 | opp_overlap 303785 303784, overlap 303785 AATATTATTAAAATC TAACTTTTGCTTG GTATTTTTG CAAGCAAAAGTTA AAATTGTTATTGATG surE 305377 - 306153 + | stationary phase survival protein SurE CJE0340 306146 - 306796 + | thiF family protein TERM 348 306848 - 306811 - T 74 -7.3 -3.86311 | opp_overlap 306813, overlap 306813 306832 AGATTGAAATTTAAA TATTTATCTTAGATAAA TGAA TTTATCTAAGATAGAAA AAATTACAAAAATAG TERM 349 306846 - 306813 - T 84 -9.9 -3.51234 | opp_overlap 306813, overlap 306811 306832 ATTGAAATTTAAATA TTTATCTTAGATAAA TGAA TTTATCTAAGATAGA AAAAATTACAAAAAT panD 307251 - 306871 - | aspartate alpha-decarboxylase panC 308096 - 307248 - | pantoate--beta-alanine ligase TERM 350 307313 - 307303 - G 78 -6.8 -4.63218 | GTTTTTCCAACAAAA GCAG CCA CTGC TCCTAAAACATTATC TERM 351 307325 - 307335 + g 70 -4 -4.98616 | opp_overlap 307325, overlap 307334 CTGCTCCTAAAACAT TATC GGC GATA TTTTTAATATTTTCC panB 308931 - 308107 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 352 309879 - 309869 - g 76 -2.6 -5.65678 | opp_overlap 309869 ATAAAAGAGAAAAAA TTTT AGA AAAA TATTTAGATGAACTT CJE0344 309148 - 309909 + | beta-lactamase modC 310891 - 310007 - | molybdenum ABC transporter, ATP-binding protein modB 311569 - 310901 - | molybdenum ABC transporter, permease protein CJE0347 311963 - 311562 - | TOBE domain-containing protein modA 312709 - 311960 - | molybdenum ABC transporter, periplasmic molybdenum-binding protein CJE0349 313449 - 312763 - | biotin biosynthesis protein BioC TERM 353 313380 - 313349 - G 70 -6.2 -4.09511 | gap 1, overlap 313336 AACATTTTTTTAAAA TGCGAAATTTCTAAA TTT TTTA-AAATTTCACA AAGTTTTAAACCCAT CJE0350 314057 - 313446 - | hypothetical protein TERM 354 313532 - 313508 - G 77 -7.3 -4.26327 | opp_overlap 313490 313508 313507 313509 CATTTAGGAAAATAA GCTTTGAAAAA GTG TTTTTTAAAGC ATTTTGAGGAAAAAT TERM 355 313508 - 313532 + g 75 -9.5 -3.04517 | opp_overlap 313508, overlap 313490 313507 313509 CATTTAGGAAAATAA GCTTTGAAAAA GTG TTTTTTAAAGC ATTTTGAGGAAAAAT TERM 356 313655 - 313668 + g 73 -3.9 -5.33921 | TTAAATCTTTTTCAT CTTTA AAAA TAAAG TTTTTTGCTTCATTT TERM 357 313916 - 313894 - G 100 -10.8 -4.85599 | opp_overlap 313891 313894 GTGATTTTAGAAAAA GACTTTAAAT CAA ATTTAAAGTC TAAATTTTCATAATC TERM 358 313894 - 313916 + g 82 -10.8 -2.78495 | opp_overlap 313894, overlap 313891 GTGATTTTAGAAAAA GACTTTAAAT CAA ATTTAAAGTC TAAATTTTCATAATC bioF 315196 - 314054 - | 8-amino-7-oxononanoate synthase TERM 359 314484 - 314472 - G 71 -7.7 -3.5361 | overlap 314479 CAAGCACCCATAGAA GCAAG AGC CTTGC CAAAGGTAAAAACTA TERM 360 314994 - 314961 - G 74 -6.9 -4.26189 | gap 1 TCATAAATTGTAAAA TTTCCA-CTCAAGCTC CTT GAACTTGAGCTTGAAA AAAATAAGTCTTGTT TERM 361 316053 - 316023 - g 83 -10.6 -3.2794 | opp_overlap 316019 316018 TTGGACGCACAGGAA CTTTGTTTGCCTTA CAT CAATGCAAACAAAG CCCCGATTTTATCTG TERM 362 316317 - 316301 - g 78 -6.7 -4.67552 | opp_overlap 316300 316301 TTTATCAAAAAAGAA TTTTCAA GAC TTGAAAA ATTTGACTTTTTGGG bioA 315263 - 316546 + | adenosylmethionine--8-amino-7-oxononanoate transaminase bioD 317138 - 316533 - | dethiobiotin synthetase CJE0354 317462 - 317148 - | SMR family multidrug efflux pump TERM 363 317215 - 317204 - G 78 -3 -5.53991 | opp_overlap 317204 317208 CAGTGATTAAAAAAA GTTT TAAA AAAC TTTTACTTTCTTTAT CJE0355 317803 - 317465 - | SMR family multidrug efflux pump rplY 317935 - 318471 + | 50S ribosomal protein L25/general stress protein Ctc TERM 364 318518 - 318532 + G 71 -5.6 -4.51097 | opp_overlap 318518 318517 AGAGTATGAAAATAC CCGCCA TAA TGTCGG TTTTATGCTAATTGA pth 318468 - 319013 + | peptidyl-tRNA hydrolase TERM 365 319141 - 319156 + G 74 -6.2 -4.3821 | GATCTACCAAAAGCC GCAAAT CTTG ATTTGC TTTATGTTATGTTTT TERM 366 319883 - 319912 + G 89 -11.7 -2.81193 | opp_overlap 319888 319892, overlap 319879 319886 ATTATTTTTTTCCTG TAATAGCAAGATT TTTT AATCTTGCTATTG TAACTTTTATGGCTT TERM 367 319886 - 319909 + G 93 -11.2 -3.543 | opp_overlap 319888 319892, overlap 319883 319879 ATTTTTTTCCTGTAA TAGCAAGATT TTTT AATCTTGCTA TTGTAACTTTTATGG TERM 368 319907 - 319888 - g 75 -9.4 -3.01712 | opp_overlap 319886 319883 319879, overlap 319892 TTTTTTCCTGTAATA GCAAGATT TTTT AATCTTGC TATTGTAACTTTTAT CJE0358 319015 - 320073 + | hypothetical protein lysA 320117 - 321325 + | diaminopimelate decarboxylase TERM 369 321911 - 321893 - g 77 -4.7 -5.31091 | opp_overlap 321903 GATAAGAAAACAAAA TTCAAAA ATCGA TTTTGAA GATATTAAAATCATT CJE0360 321327 - 322094 + | HAD family hydrolase pheA 322082 - 323155 + | chorismate mutase/prephenate dehydratase TERM 370 323283 - 323263 - g 73 -9.1 -2.56696 | overlap 323262 323261 CAAGTAATGAAAATC CTTTTGGTA CGC CACCAAAAG CCATAGAATGCTTAA TERM 371 323845 - 323869 + G 71 -8.7 -2.87003 | overlap 323841 GATTAGGAGGCTTAC GCATTGGTTAT GGT ATAGCTAATGC TAATATTATTAGTGC hisC 323145 - 324239 + | histidinol-phosphate aminotransferase TERM 372 325818 - 325806 - g 71 -3.4 -5.30155 | opp_overlap 325806 GCAGCAAGGAAAAAA GTTG AAGAA CAAC TTGGTTTTGGGGATA fliF 324291 - 325973 + | flagellar MS-ring protein TERM 373 326016 - 326041 + G 74 -6.9 -4.31835 | TGGTCTATGATGATT TATCGATGCCT GAGA AGGTAGCGATA TTTCTTATACAACTT TERM 374 326154 - 326168 + G 77 -7.8 -4.10855 | opp_overlap 326153 AAAATGTTGATAGAT CCGTAG CTA CTGCGG TTTTAGAAGAATTTT fliG 325973 - 327001 + | flagellar motor switch protein G TERM 375 327540 - 327526 - g 73 -8.6 -3.10925 | overlap 327525 AAAATGAGAAAGAAT TAGCAG ATA CTGCTA TAGATATCGCTAAAG TERM 376 327589 - 327573 - g 70 -5.9 -4.21933 | GTAATCTTAAAAGAA CTTGAAC TAA ATTCAAG TAAGATAGCTTATGC fliH 327009 - 327839 + | flagellar assembly protein H dxs 327832 - 329679 + | 1-deoxy-D-xylulose-5-phosphate synthase CJE0367 329765 - 330175 + | FUR family transcriptional regulator TERM 377 330197 - 330185 - f 72 -6.3 -4.34008 | opp_overlap 330184 330187 330193, overlap 330186 330187 330193 CATTAAGCAAAATAA GGTTA AAA TAACC CATATATTTTAAGGG TERM 378 330221 - 330187 - f 78 -10.3 -2.50508 | opp_overlap 330184 330187 330193, overlap 330185 330186 330193 TTAAGCAAAATAAGG TTAAAATAACCCATA TATTT TAAGGGTTATTTTAA TGATTTATGAAATTC TERM 379 330187 - 330221 + F 79 -10.3 -3.02632 | opp_overlap 330185 330187 330186 330193, overlap 330184 330193 TTAAGCAAAATAAGG TTAAAATAACCCATA TATTT TAAGGGTTATTTTAA TGATTTATGAAATTC TERM 380 330565 - 330577 + G 70 -3.5 -5.07107 | AGAGCCTAAAATTTG TATTT TAA AAATA TTTTTTCCAACTTTG TERM 381 330685 - 330699 + G 70 -5.8 -4.34402 | opp_overlap 330694 TATCGTTTTATATGG TTTTGA ATA TCAAAA TTTTGATATAGAGAA CJE0368 330221 - 331417 + | hypothetical protein TERM 382 331575 - 331564 - g 74 -3 -5.47218 | TTGTATTTAAAAAAA GATT TAAA AATC GCTGATATTGCCTGT TERM 383 331657 - 331647 - g 76 -2.6 -5.63857 | AAAAATGGAAAAAAA TATT CTA AATA TTAAAGGTATTGATC ubiE 331420 - 332127 + | ubiquinone/menaquinone biosynthesis methyltransferase xseA 332124 - 333287 + | exodeoxyribonuclease VII large subunit serC 333297 - 334373 + | phosphoserine aminotransferase CJE0372 334370 - 334720 + | endoribonuclease L-PSP family protein TERM 384 334730 - 334710 - T 86 -11.3 -3.27525 | opp_overlap 334714, overlap 334705 CTTTTGGAAAGCTAA GAGAGAATT AAA AATTCTCTC CTCCAAATTTTAAAA fabH 335691 - 334717 - | 3-oxoacyl-(acyl carrier protein) synthase III plsX 336670 - 335684 - | putative glycerol-3-phosphate acyltransferase PlsX rpmF 336822 - 336676 - | 50S ribosomal protein L32 TERM 385 336811 - 336821 + g 74 -3.2 -5.43621 | GCTCACTCTTCTCTT TGGT ACT GCCA TTTTTTCTCCTTTAT CJE0376 337199 - 336846 - | hypothetical protein ndk 337613 - 337200 - | nucleoside diphosphate kinase TERM 386 337714 - 337687 - R 73 -5.7 -4.59424 | opp_overlap 337687 337693 337710, overlap 337693 AAAGTTAAATTAAAA GAAAAAGCTAG GAATCT CTAGCTTTTTA ATTTTTTAAAATTAT TERM 387 337693 - 337708 + r 81 -5.4 -5.25735 | opp_overlap 337687 337693, overlap 337687 AAATTAAAAGAAAAA GCTAGG AATC TCTAGC TTTTTAATTTTTTAA TERM 388 337708 - 337693 - R 83 -4.7 -5.56372 | opp_overlap 337693 337687, overlap 337687 AAATTAAAAGAAAAA GCTAG GAATCT CTAGC TTTTTAATTTTTTAA CJE0378 338010 - 337726 - | ferredoxin, 4Fe-4S TERM 389 338106 - 338057 - H 78 -7.7 -4.46926 | gap 1, opp_overlap 338057 338065 338068, overlap 338065 338094 GATTTTAGCATAAAA TTCTTAAATAATGTAAA-TTTTGA TAA TCAAAAATTTACATTATTTGATAA TAATTATAACTTTCT TERM 390 338057 - 338106 + H 79 -9.9 -2.88398 | gap 1, opp_overlap 338057 338065 338094, overlap 338065 338068 GATTTTAGCATAAAA TTCTTAAATAATGTAAA-TTTTGA TAA TCAAAAATTTACATTATTTGATAA TAATTATAACTTTCT TERM 391 338098 - 338065 - H 81 -9.3 -3.67737 | gap 1, opp_overlap 338057 338065 338068, overlap 338057 338094 CATAAAATTCTTAAA TAATGTAAA-TTTTGA TAA TCAAAAATTTACATTA TTTGATAATAATTAT TERM 392 338065 - 338098 + H 81 -9.3 -3.82433 | gap 1, opp_overlap 338065 338057 338094, overlap 338057 338068 CATAAAATTCTTAAA TAATGTAAA-TTTTGA TAA TCAAAAATTTACATTA TTTGATAATAATTAT TERM 393 338068 - 338095 + H 70 -6.6 -4.03141 | gap 1, opp_overlap 338065 338057 338094, overlap 338065 338057 AAAATTCTTAAATAA TGTAAA-TTTTGA TAA TCAAAAATTTACA TTATTTGATAATAAT TERM 394 338331 - 338346 + G 71 -4.8 -4.81644 | overlap 338340 AAGGAGCGGTAGTAT TCTTTT ATCC AAAAGA TTTTACTTTTGTTTG CJE0379 338216 - 338812 + | anti-oxidant AhpCTSA family protein TERM 395 338841 - 338827 - f 71 -7.1 -3.96327 | opp_overlap 338827 ATTTCTTAGTATAAA GCCTC TTTAC GAGGC TTTTTCTTCATTTTT TERM 396 338827 - 338841 + F 95 -7.1 -5.30199 | opp_overlap 338827 ATTTCTTAGTATAAA GCCTC TTTAC GAGGC TTTTTCTTCATTTTT TERM 397 339321 - 339333 + G 82 -6.3 -5.26875 | opp_overlap 339312 339321 ATCAATCCTCTAAAA GGTTT AAA AAACC TTTTTTCATTGAAAA TERM 398 339333 - 339321 - g 70 -6.3 -4.11751 | opp_overlap 339321, overlap 339312 ATCAATCCTCTAAAA GGTTT AAA AAACC TTTTTTCATTGAAAA TERM 399 339504 - 339523 + G 90 -7.2 -5.37865 | opp_overlap 339492 AGAGCTATTGTTTTA GCAGCTAT TGTT ATAGTTGC TTTTTTAATTATTGC flhB 338931 - 340019 + | flagellar biosynthesis protein FlhB motB 340768 - 340025 - | flagellar motor protein MotB TERM 400 340717 - 340681 - G 100 -8.7 -5.20606 | opp_overlap 340712 AAAGAGCAATAAAAA GTGCCAAAAGCAAACTT AGA AAGTCTGCATAAGGCAC AGCCCATTTTTCACC CJE0382 341547 - 340771 - | flagellar motor protein MotA polA 344203 - 341564 - | DNA polymerase I TERM 401 342503 - 342523 + g 93 -5.5 -5.71983 | TAAAACTTTTTCATC GGTAGAATA TCC TGTTTTACC TTTTTTTCTACTTGG TERM 402 343882 - 343860 - G 79 -7.1 -4.386 | gap 1, opp_overlap 343863 CAAGTTTTTACAAAA GAAGC-GATG ATAT CATCAGCTTC ATAACCTTCTTGAGA CJE0384 344367 - 345728 + | major facilitator family transporter CJE0385 345725 - 346732 + | inosine-uridine preferring nucleoside hydrolase family protein CJE0386 347131 - 346688 - | hypothetical protein TERM 403 346907 - 346917 + g 81 -2.6 -5.79595 | opp_overlap 346907 GGATTTGCTAAAGTA TTTT TCT AAAA TTTTTTCTTTTCCAA CJE0387 347727 - 347131 - | hypothetical protein CJE0388 348391 - 347708 - | hypothetical protein CJE0389 348986 - 348435 - | hypothetical protein TERM 404 348562 - 348552 - G 71 -3.2 -5.32599 | TATAAAAGATAAAAA TGCC AAA AGCA TGCACAAAAATGCAA TERM 405 348667 - 348651 - G 73 -3.7 -5.27769 | ATAAAAAACGAAAAA TAAAGCT AAA AGCCCTA AAAATAAAATTTTAT uvrA 351810 - 348988 - | excinuclease ABC subunit A TERM 406 349027 - 349038 + g 75 -4.4 -5.31091 | opp_overlap 349027 TAGATCTAAATAATA TCCT GTAT AGGA TTTTGTTTTCTTATG TERM 407 349752 - 349763 + g 71 -7.2 -3.73775 | TTGAACGTGGTGTGC GCCC AATT GGGC TTTGATCAAGATAAA TERM 408 350202 - 350212 + g 71 -4.6 -4.81863 | GCTCTACGACAATTA GGGT ATT GCCC TTTTGTTGTAAATTT TERM 409 351885 - 351864 - R 71 -5.9 -4.50841 | overlap 351867 ATAATAATATTAAAA GAACTTGGA TAAA TCCAAGTTA AAAATTTATAAAATT TERM 410 351882 - 351867 - R 77 -7.6 -4.33487 | overlap 351864 ATAATATTAAAAGAA CTTGGA TAAA TCCAAG TTAAAAATTTATAAA CJE0391 352668 - 351883 - | hypothetical protein TERM 411 352803 - 352830 + G 75 -5.9 -4.74598 | opp_overlap 352803 352813 AAAAATGTTTCAAAA TATTATAAAAT ATAAAG ATTTTATAATA TTTATTTTAAATTTA CJE0392 352768 - 352881 + | hypothetical protein CJE0393 352994 - 352896 - | hypothetical protein trpE 353084 - 354334 + | anthranilate synthase component I trpD 354331 - 355932 + | anthranilate synthase component II trpF 355919 - 356518 + | N-(5'phosphoribosyl)anthranilate isomerase TERM 412 357045 - 357055 + G 72 -2.6 -5.42131 | overlap 357048 AGCTTGGGTTGGAGA TATT AAA AATA TTTTTTATGTGGTTG trpB 356515 - 357693 + | tryptophan synthase subunit beta trpA 357686 - 358435 + | tryptophan synthase subunit alpha CJE0399 358506 - 358928 + | hypothetical protein fliN 358928 - 359236 + | flagellar motor switch protein TERM 413 359997 - 359956 - g 75 -4.2 -5.20633 | gap 1, opp_overlap 359954 359956 AAAAACAGAGAAAAA TTTTG-ATTCTTTTTTT GAAGAGAAT AAAAAAAGAATTCAAAA TCTTATAGAGCAGCG CJE0401 359237 - 360034 + | hypothetical protein CJE0402 361491 - 360031 - | Ppx/GppA family phosphatase TERM 414 360501 - 360489 - G 76 -6.3 -4.58283 | TAAGGGTTGTAAAAA TTTGC AGA GCAAA ATGTGGAGTTTTATT TERM 415 361032 - 361042 + g 72 -2.6 -5.4505 | opp_overlap 361032 GAGATATGCAAGAAA TAAT TCT ATTA TTTTTTATTAAACAC CJE0403 361736 - 361491 - | ferredoxin, 4Fe-4S TERM 416 361847 - 361823 - R 71 -5.7 -4.52349 | opp_overlap 361825, overlap 361824 361825 AGAAATAAAGATAAA TTTTTTGCACC GAA GGTGCAAAATT GTTAAGATTTTTTAG TERM 417 361846 - 361824 - R 75 -9.2 -3.28969 | opp_overlap 361825, overlap 361823 361825 GAAATAAAGATAAAT TTTTTGCACC GAA GGTGCAAAAT TGTTAAGATTTTTTA TERM 418 361825 - 361845 + r 100 -12.7 -3.75617 | opp_overlap 361824 361823 361825 AAATAAAGATAAATT TTTTGCACC GAA GGTGCAAAA TTGTTAAGATTTTTT TERM 419 361845 - 361825 - R 95 -12.7 -2.55755 | opp_overlap 361825, overlap 361824 361823 AAATAAAGATAAATT TTTTGCACC GAA GGTGCAAAA TTGTTAAGATTTTTT CJE0404 362520 - 361849 - | DNA-binding response regulator CJE0405 362916 - 362599 - | FolB domain-containing protein CJE0406 363509 - 362901 - | putative glycerol-3-phosphate acyltransferase PlsY TERM 420 363607 - 363593 - H 72 -4.4 -5.01858 | opp_overlap 363593 TAAACAAAAAAATAA TTTTTA AGA TAAAAA TAGTATTAATTAATT ccpA-2 363710 - 364735 + | cytochrome c551 peroxidase TERM 421 364739 - 364772 + TF 90 -8.3 -4.68511 | opp_overlap 364745 364748, overlap 364745 CCTGAACTATAAGGT TCCAAACAAGCTCTA TTTT TAGAGCTTGTTTAAA TTTCTTTATCTTAGC CJE0408 364829 - 364719 - | hypothetical protein TERM 422 364745 - 364766 + gF 100 -11.7 -3.97446 | opp_overlap 364745 364748, overlap 364739 CTATAAGGTTCCAAA CAAGCTCTA TTTT TAGAGCTTG TTTAAATTTCTTTAT TERM 423 364766 - 364745 - Gf 95 -11.7 -3.58533 | opp_overlap 364745 364739, overlap 364748 CTATAAGGTTCCAAA CAAGCTCTA TTTT TAGAGCTTG TTTAAATTTCTTTAT TERM 424 364763 - 364748 - Gf 76 -7.6 -3.9243 | opp_overlap 364745 364739, overlap 364745 TAAGGTTCCAAACAA GCTCTA TTTT TAGAGC TTGTTTAAATTTCTT glmM 364829 - 366166 + | phosphoglucosamine mutase lspA 366159 - 366629 + | lipoprotein signal peptidase CJE0411 366613 - 367065 + | hypothetical protein CJE0412 368409 - 367039 - | coproporphyrinogen III oxidase TERM 425 368498 - 368476 - H 79 -8 -3.88442 | opp_overlap 368472 368468 TAAAATAGGAGTAAA TTTTTTATTT CTT AAATAAAAAA TGGGATTAAGTTTTT CJE0413 368537 - 368788 + | hypothetical protein TERM 426 368822 - 368793 - T 83 -11 -2.53759 | overlap 368804 AAGATTTTTAATTTA TTTAGAGAATAG AACAAA CTATTCTCTAAA AGACATATCTAAATT cmeC 370289 - 368811 - | RND efflux system, outer membrane lipoprotein CmeC TERM 427 369827 - 369842 + g 71 -9 -2.78032 | overlap 369826 369841 AGCCTGATTTTGAGG CGCGAT ATGT ATCGCG ATATTTTCCCCAAAG cmeB 373404 - 370282 - | RND efflux system, inner membrane transporter CmeB TERM 428 373255 - 373269 + g 71 -7.2 -3.70902 | overlap 373253 TGCATCAGCTCCTGT GTAAGT TGC ACTTAC TTTAACTGTAGGAGG cmeA 374507 - 373404 - | RND efflux system, membrane fusion protein CmeA TERM 429 374554 - 374537 - R 79 -5.7 -5.05577 | opp_overlap 374536 AAATTAAATTAAAAA TTGTAAT ATTT ATTACAA AAATTTTTGGCTAAT CJE0417 375233 - 374601 - | TetR family transcriptional regulator CJE0418 376596 - 375220 - | iron-sulfur cluster-binding domain-containing protein TERM 430 376840 - 376819 - g 77 -4.5 -5.22039 | opp_overlap 376823 CGTAAATTCAAAAAA CAAGTAGAT AGAA ATCTAGTTG TGACTGAAGTAAGAG rpsU 376756 - 376968 + | 30S ribosomal protein S21 TERM 431 376976 - 376987 + F 95 -7.2 -5.4251 | opp_overlap 376976 GACTCTAACCCAAAA GCCC GAAA GGGC TTTTTTATATCTACA TERM 432 376987 - 376976 - f 77 -7.2 -4.2803 | opp_overlap 376976 GACTCTAACCCAAAA GCCC GAAA GGGC TTTTTTATATCTACA TERM 433 377214 - 377224 + G 78 -6.8 -4.58466 | opp_overlap 377213 AATCAAGCAGCTAAT GCTC AAG GAGC TTTTGTAATTATCGA CJE0420 377088 - 377693 + | hypothetical protein CJE0421 377703 - 378872 + | glutathionylspermidine synthase family protein CJE0422 378875 - 379810 + | 2-hydroxyacid dehydrogenase TERM 434 380153 - 380139 - g 89 -8.6 -4.56335 | AAAAAAATCAATAAA GCTATC AAA GATAGC AAACTTAAAGTTAAT CJE0423 379800 - 380291 + | nucleotide-binding protein CJE0424 380300 - 380776 + | putative lipoprotein CJE0425 380787 - 381611 + | hypothetical protein TERM 435 382395 - 382416 + G 91 -4.5 -5.95946 | overlap 382411 ATGAATATTTAAATG CTTTTGGAG ATAT TTCTAAAAG TTTTTTTATTATTGA TERM 436 382628 - 382616 - g 82 -4.1 -5.55695 | overlap 382618 CAACAAGATAAAAAA GTCCT AGA AAGAC TCCATTCTTGGGGTA TERM 437 383289 - 383279 - g 72 -4 -5.06585 | overlap 383288 GAAAGTATACAAAAA GAAT TAA ATTC AAGTTTTGATAAAAG CJE0426 381611 - 383323 + | ATPase, AAA family protein CJE0427 383860 - 383288 - | hypothetical protein TERM 438 383800 - 383777 - G 81 -8.3 -4.26881 | opp_overlap 383776, overlap 383772 TTTTACAAAATCAAA GGCTTTTAT GATATG ATAAAAGCC ATAGATTAAACTTAT CJE0428 384753 - 383860 - | putative sulfite oxidase subunit YedY CJE0429 385609 - 384809 - | hypothetical protein TERM 439 384907 - 384925 + g 100 -7.6 -5.81622 | TTGAAGTTTCTTGCA TTAGAATT TTA AATTCTAA TTTTTTTAATTTTCT TERM 440 385230 - 385241 + g 71 -3 -5.27769 | overlap 385224 AAACAGTCATTGATA TTTG AAAT CAAA TTTTTAATTTTTTGT TERM 441 385403 - 385413 + g 72 -4 -5.16038 | opp_overlap 385403 385398, overlap 385398 385410 CATATAATTATAAAC TTTC AGG GAAA TTTTATTTCTTATCT pyrF 386430 - 385591 - | orotidine 5'-phosphate decarboxylase nusB 386825 - 386427 - | transcription antitermination protein NusB ribH 387289 - 386825 - | riboflavin synthase subunit beta kdsA 388101 - 387286 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 442 387892 - 387908 + g 71 -4.5 -4.83593 | CATACCAAATTCATC TTTTACG CTT TGTAAAA TTTTTAATCCTTCTT CJE0434 389030 - 388098 - | integral membrane protein TERM 443 389359 - 389347 - g 81 -2.7 -5.82388 | AAATGTGAAAAAAAA CACTT TAA AAGTA GCTAAAGAAAGCGAT TERM 444 389811 - 389831 + G 70 -8.3 -3.16191 | overlap 389804 TTGTAAGTTCTATTG CAGGAACTA CTA TAGATCCTG TTAATGAAAGTGTAG engA 389132 - 390514 + | GTP-binding protein EngA aroK 390501 - 390998 + | shikimate kinase TERM 445 391182 - 391172 - g 72 -6.8 -4.14013 | opp_overlap 391172 391181 CAAAATTCCTTAAAA GCTG CTG CAGC TTTTTTAAGCCTTGG TERM 446 391172 - 391182 + G 83 -6.8 -5.055 | opp_overlap 391172, overlap 391181 CAAAATTCCTTAAAA GCTG CTG CAGC TTTTTTAAGCCTTGG trpS 390995 - 391954 + | tryptophanyl-tRNA synthetase serS 391965 - 393200 + | seryl-tRNA synthetase CJE0439 393210 - 395672 + | TPR domain-containing protein TERM 447 395705 - 395666 - T 100 -17.6 -3.7732 | opp_overlap 395676, overlap 395676 TTTTGATATTAATAA CAACTAAAAATGCTTAGA AATT TCTAAGCATTTTTAGTTA AGCTTGAAGATCTAG TERM 448 395676 - 395695 + T 100 -9.4 -4.87893 | opp_overlap 395676 395666 AATAACAACTAAAAA TGCTTAGA AATT TCTAAGCA TTTTTAGTTAAGCTT TERM 449 395695 - 395676 - T 100 -9.4 -5.03201 | opp_overlap 395676, overlap 395666 AATAACAACTAAAAA TGCTTAGA AATT TCTAAGCA TTTTTAGTTAAGCTT CJE0440 396338 - 395703 - | hypothetical protein TERM 450 396401 - 396433 + r 100 -10.9 -4.79352 | opp_overlap 396401 396398 396403 396408, overlap 396395 AAAAATTTATAAGGA CATTAAATTCCTT ATTTTCA AAGGAATTTAATG TTTTATTGTAGATAA TERM 451 396433 - 396401 - R 82 -10.9 -2.8967 | opp_overlap 396395 396401, overlap 396398 396403 396408 AAAAATTTATAAGGA CATTAAATTCCTT ATTTTCA AAGGAATTTAATG TTTTATTGTAGATAA pyk 397878 - 396436 - | pyruvate kinase TERM 452 397216 - 397237 + g 74 -6.7 -4.35042 | opp_overlap 397204, overlap 397208 397217 AAATTTTTCAATTTT TGCAAAAAT AGAT ATTTTTGCG TTATTTTGTGCTAAA TERM 453 397439 - 397421 - G 70 -3.9 -5.0538 | TTTGAGTTTAAAAAA CCATCAT TTTCT ATAATGG TTTCAATTTTTTGAT TERM 454 397526 - 397536 + g 70 -4 -4.90869 | opp_overlap 397526 TCAATTTTTAACATA TCTA AAA TAGA TTTTTGATTGATACT CJE0442 399273 - 397927 - | malate:quinone oxidoreductase, putative CJE0443 400020 - 399391 - | pantothenate kinase CJE0444 400297 - 400007 - | tram-like protein CJE0445 401292 - 400294 - | putative lipoprotein CJE0446 401867 - 401289 - | hypothetical protein TERM 455 401780 - 401763 - G 73 -5.7 -4.65446 | opp_overlap 401763, overlap 401756 AGCAGATATATAAAA TTTATAC TTGC GTATAAA TCTCTCTCCTTTGAT gatC 402011 - 402295 + | aspartyl/glutamyl-tRNA amidotransferase subunit C CJE0448 402363 - 402926 + | cvpA family protein TERM 456 403159 - 403178 + G 74 -6.5 -4.4078 | opp_overlap 403159 TTACTTGAAGAAGCA GAAATGG TAACTT CCATTTC TTTTGGTTCAGCAGG fur 402928 - 403401 + | ferric uptake regulation protein TERM 457 403940 - 403958 + G 71 -2.4 -5.42259 | TAGTGCGTTCTAAAG TGGTGAGT TTG ATTCGTCA TTTTTTTGAAAATAA lysS 403402 - 404907 + | lysyl-tRNA synthetase glyA 404904 - 406148 + | serine hydroxymethyltransferase TERM 458 406164 - 406191 + G 74 -7.2 -3.88232 | gap 1, opp_overlap 406162, overlap 406166 TTTCACCAATGGATA TG-TCGCTAATTA AAA TAATTGGCGATCA TTATTATATAAGACG TERM 459 406166 - 406188 + G 77 -10 -3.01243 | opp_overlap 406162, overlap 406164 TCACCAATGGATATG TCGCTAATTA AAA TAATTGGCGA TCATTATTATATAAG CJE0452 406145 - 406690 + | hypothetical protein TERM 460 406785 - 406767 - g 74 -5.4 -4.91084 | AATAAAAGTGAAAAA GTAAAAAA AAT TCTTTTAC GAGTTATTGCTTTAG CJE0453 406704 - 407540 + | hypothetical protein TERM 461 407602 - 407630 + G 76 -7.6 -3.87373 | gap 1, opp_overlap 407593 407596 407602, overlap 407593 407623 TAGAATGCATAATAA TGCTATTAAAGCC TTAG GGCTT-GATAGCA TTTATACACGCTATC aroE 407537 - 408325 + | shikimate 5-dehydrogenase TERM 462 408348 - 408360 + T 80 -4.9 -5.36441 | overlap 408338 GTTATTTTTCTTGTA TAAGA AAA TCTTA TTTTTTGTGTGAGAA CJE0455 409299 - 408400 - | putative lipoprotein lgt 409389 - 410204 + | prolipoprotein diacylglyceryl transferase TERM 463 410358 - 410369 + G 74 -2.2 -5.54264 | gap 1, opp_overlap 410358 TAGACTTTATCCAAA GCGCC TCA GG-GC TTTTTTTAGGTCTTT frdC 410273 - 411055 + | fumarate reductase cytochrome b-556 subunit frdA 411039 - 413030 + | fumarate reductase flavoprotein subunit sdhB 413023 - 413748 + | fumarate reductase iron-sulfur subunit TERM 464 413773 - 413750 - f 93 -9 -4.88895 | gap 1, opp_overlap 413750 413752 AAAGAAATAAATAAA TCTTTCCCCTT TTT AAGGGG-AAGA TTATGAAAGAATTAT TERM 465 413750 - 413773 + F 77 -9 -3.30338 | gap 1, opp_overlap 413750, overlap 413752 AAAGAAATAAATAAA TCTTTCCCCTT TTT AAGGGG-AAGA TTATGAAAGAATTAT TERM 466 413752 - 413772 + F 81 -10.5 -2.57881 | opp_overlap 413750, overlap 413750 AGAAATAAATAAATC TTTCCCCTT TTT AAGGGGAAG ATTATGAAAGAATTA TERM 467 414318 - 414332 + G 70 -3.6 -5.07107 | opp_overlap 414306 414305, overlap 414305 AAGTCTTTTAAATGC TCTTTT AAA AGAAGA TTTTTTAGGGGTTTC CJE0460 413776 - 415962 + | GTP-binding protein TERM 468 416378 - 416366 - g 72 -6.3 -4.34912 | opp_overlap 416365 416366, overlap 416363 AATGAAGTAAAACAA GCAAA AAG TTTGC ATATTTTTGCACCCA CJE0461 416072 - 417781 + | GTP-binding protein TERM 469 418276 - 418298 + G 75 -4.1 -5.20333 | opp_overlap 418266 418276 GGAGAGCTTGTTAAA GCAAGTGTA AAATC TGCCCTTGC TTTTTATTCTAAATC CJE0462 417781 - 418485 + | hypothetical protein TERM 470 418472 - 418493 + F 76 -6.7 -4.5287 | opp_overlap 418472 TTAATTCTAAAGATA TAGAGCTTT ATTA AAAGTTCTA TTTTCATTACTTTCA CJE0463 418621 - 419349 + | hypothetical protein CJE0464 419351 - 421072 + | oxidoreductase, putative CJE0465 421155 - 421045 - | hypothetical protein TERM 471 421072 - 421112 + g 79 -5 -5.17786 | gap 1, opp_overlap 421079, overlap 421073 421076 421078 421079 AAAAAGCTTAGCTTG ATAATAA-CTTGAGAGTTT TTGA AAACTCTCAAGATTATAAA TTTTTAATTTTCTTC TERM 472 421073 - 421111 + g 74 -8.5 -3.68231 | gap 1, opp_overlap 421079, overlap 421072 421076 421078 421079 AAAAGCTTAGCTTGA TAATAA-CTTGAGAGTTT TTGA AAACTCTCAAGATTATAA ATTTTTAATTTTCTT TERM 473 421076 - 421108 + g 79 -10.2 -2.91298 | gap 1, opp_overlap 421079, overlap 421073 421072 421078 421079 AGCTTAGCTTGATAA TAA-CTTGAGAGTTT TTGA AAACTCTCAAGATTA TAAATTTTTAATTTT TERM 474 421078 - 421105 + g 83 -10 -3.56762 | opp_overlap 421079, overlap 421076 421073 421072 421079 CTTAGCTTGATAATA ACTTGAGAGTTT TTGA AAACTCTCAAGA TTATAAATTTTTAAT TERM 475 421104 - 421079 - G 100 -13.5 -3.79906 | opp_overlap 421078 421076 421073 421072 421079 TTAGCTTGATAATAA CTTGAGAGTTT TTGA AAACTCTCAAG ATTATAAATTTTTAA TERM 476 421079 - 421104 + g 100 -13.5 -2.72973 | opp_overlap 421079, overlap 421078 421076 421073 421072 TTAGCTTGATAATAA CTTGAGAGTTT TTGA AAACTCTCAAG ATTATAAATTTTTAA TERM 477 421866 - 421878 + G 71 -4.9 -4.80882 | opp_overlap 421866 TTTAGCACTAGTAAA GAATT GGA AATTC TTTTTGGTGTGAAAT CJE0466 421278 - 421973 + | hypothetical protein TERM 478 422024 - 422008 - T 89 -4.5 -6.07374 | ATAAAAAAGAAAAAA TGTTAAA TAT CTTAACA TACAAATTCAAGTCA CJE0467 422784 - 422080 - | hypothetical protein TERM 479 422120 - 422146 + g 70 -5.3 -4.6856 | TCGTTATTTTGTGAG TTTTGTTGATA AGTTC TAGCAACAAAA TTTTTAAAGTCTTTA TERM 480 422321 - 422340 + g 70 -6.4 -4.08571 | overlap 422305 422322 GCTTCAAATTCCATT TTTGCAGC ATTT GCTGCAAC TTTATAGTCTTGTGG TERM 481 422322 - 422339 + g 77 -9.9 -3.0442 | overlap 422305 422321 CTTCAAATTCCATTT TTGCAGC ATTT GCTGCAA CTTTATAGTCTTGTG CJE0468 422892 - 423254 + | HIT family protein TERM 482 423277 - 423291 + F 72 -4.4 -5.0916 | opp_overlap 423287, overlap 423287 TAATGATTTGTTATG TTTTAT CTA ATAAAA TTTTTATATTGAAAA CJE0469 423328 - 423900 + | hypothetical protein TERM 483 423908 - 423930 + T 95 -11.4 -4.10363 | AAAAATAATTTTTTA GTCTAAGAGT CTT GCTCTTAGAC TTTGTAAATTTTTAT CJE0470 424861 - 423905 - | hypothetical protein CJE0471 425131 - 424922 - | hypothetical protein TERM 484 425159 - 425179 + H 83 -8.5 -4.15222 | opp_overlap 425163, overlap 425163 AAATTTAGCCTTTAA GAAATTTTA CAT TAAAATTTC TTTATTAAAAACACT CJE0472 425298 - 425717 + | hypothetical protein CJE0473 425760 - 426020 + | hypothetical protein CJE0474 426020 - 426553 + | putative lipoprotein TERM 485 426562 - 426587 + F 74 -9.2 -2.94194 | opp_overlap 426554, overlap 426554 426553 TTATTAATTTATTTT GACAATGAAA TTTTAT TTTCATTGTC TATATAAAATTTATA TERM 486 427099 - 427115 + G 76 -6.7 -4.39989 | GAAAAAATTTTAAGT TCTTTAA AGA TTAAAGA TTTTGATGCTTTGAT CJE0475 426676 - 428253 + | ABC transporter, ATP-binding protein CJE0476 428246 - 428578 + | hypothetical protein CJE0477 428655 - 429038 + | hypothetical protein TERM 487 429039 - 429066 + T 93 -10.8 -3.90291 | gap 1, opp_overlap 429039 429045, overlap 429040 429045 TTGAACGCAATTTAA T-CAAAAGCTCCA TTT TGGAGCTTTTGTA TTTACTTGCAAGAAT TERM 488 429065 - 429039 - T 91 -12.4 -3.20991 | opp_overlap 429039 429040 429045, overlap 429045 TTGAACGCAATTTAA TCAAAAGCTCCA TTT TGGAGCTTTTGT ATTTACTTGCAAGAA TERM 489 429040 - 429064 + T 100 -15.9 -3.54146 | opp_overlap 429039 429045, overlap 429039 429045 TGAACGCAATTTAAT CAAAAGCTCCA TTT TGGAGCTTTTG TATTTACTTGCAAGA TERM 490 429045 - 429059 + T 100 -10 -4.84539 | opp_overlap 429039 429045, overlap 429040 429039 GCAATTTAATCAAAA GCTCCA TTT TGGAGC TTTTGTATTTACTTG TERM 491 429059 - 429045 - T 91 -10 -4.45664 | opp_overlap 429045 429040 429039, overlap 429039 GCAATTTAATCAAAA GCTCCA TTT TGGAGC TTTTGTATTTACTTG CJE0478 429666 - 429082 - | hypothetical protein TERM 492 429256 - 429236 - G 72 -6.3 -4.21787 | overlap 429237 AAAAAATGTTCAAAA CGATTTAAA TTT TTTAAATCA ATAGCAATGGTTATA CJE0479 429669 - 429782 + | hypothetical protein TERM 493 430685 - 430702 + G 93 -5.7 -5.69023 | opp_overlap 430677 430684 TAAGGTATAAAATCT TTATAGA ATGT TCTATAA TTTTTTTGATATTTT CJE0480 429793 - 431019 + | hypothetical protein TERM 494 431590 - 431580 - g 75 -4 -5.22312 | ATGCATATGAAAAAA CTTT AGC AAAG AATAATTCAGATTGC CJE0481 431012 - 431749 + | hypothetical protein TERM 495 432144 - 432166 + T 79 -7.9 -3.85891 | opp_overlap 432144 TCTAATAATTAAAAA GATTAAAAG TTTTT CTTTTAATC TTTCATAACTTTTTC TERM 496 432166 - 432144 - T 95 -7.9 -4.99435 | opp_overlap 432144 TCTAATAATTAAAAA GATTAAAAG TTTTT CTTTTAATC TTTCATAACTTTTTC TERM 497 432194 - 432175 - T 72 -8 -3.31322 | TTTAATCTTTCATAA CTTTTTCT TTGA AGAAAAAG ATTAAACTATCTATA TERM 498 432230 - 432194 - T 77 -5.3 -5.06414 | opp_overlap 432201 TTCTTTGAAGAAAAA GATTAAACTATCTATAA TTT TTATGGAGAGTTTGATC CTGGCTCAGAGTGAA TERM 499 432304 - 432287 - T 70 -8.5 -2.56343 | opp_overlap 432287, overlap 432286 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 500 432287 - 432304 + T 70 -8.5 -2.56596 | opp_overlap 432286 432287 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 501 433692 - 433709 + T 74 -9.1 -3.07291 | opp_overlap 433692 GTCGTAACAAGGTAA CCGTAGG AGAA CCTGCGG TTGGATCACCTCCTT TERM 502 434177 - 434199 + T 82 -7.8 -4.35682 | overlap 434179 TTAATATATATACTT CCTTTAGGTT TTA AACCTAAATG TTCTTTTAATTATCA TERM 503 434179 - 434197 + T 81 -9 -3.76665 | overlap 434177 AATATATATACTTCC TTTAGGTT TTA AACCTAAA TGTTCTTTTAATTAT TERM 504 434795 - 434778 - T 91 -11.3 -3.66803 | opp_overlap 434777 434776, overlap 434771 GCGCAAGAGGGCAAA CCCAGTG CTTG CACTGGG GGTTGTAGGACTGCA TERM 505 437593 - 437603 + T 70 -5.4 -4.57341 | AATAAAGCATCACTT CCTT GTT AAGG TTTTTAAGAAGACTT murD 439321 - 438113 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 506 438692 - 438706 + g 70 -5 -4.6759 | TTTTTCATCTTTATA GCTTAT TAT ATGAGC TTTTGTTGGAGTATT mraY 440382 - 439321 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 507 439946 - 439926 - G 74 -5.3 -4.98758 | AAAAAGGTATAAAAA GTTCCGTGC TAA GCTCTGAAC TAAAATATAAAGGTA TERM 508 440001 - 440026 + g 70 -5.5 -4.2757 | gap 1 TTTGTGCTAAAAGCT TCATTCTTGGAC TAA GTCCT-GAATGA TTATCTTTTTTTAGA TERM 509 440326 - 440314 - G 75 -4.1 -5.33866 | TAAAGCGATAAAAAA TGCAA ATC CTGCA CGCACACTAATATAA TERM 510 441723 - 441712 - g 72 -4.4 -5.06103 | opp_overlap 441707 441712 AGAATGTGCAAAAAA GCAT GATT ATGC TTTTATCATTACAAG pgm 440462 - 441940 + | phosphoglyceromutase fabG 442012 - 442755 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 511 442913 - 442889 - g 70 -5.1 -4.52589 | TTGTGGGAGATAAAA TTTATTTTTGC ACA GCAAATACAAA AGGACTTTTTAAGCA CJE0486 442765 - 443172 + | hypothetical protein TERM 512 443193 - 443235 + F 88 -5.2 -5.54403 | opp_overlap 443193 443198 443200 443204 443208, overlap 443194 443198 TGATAATTTTATTAA CTATATATTAATTAAGATAA ATA TTATCTTAATTAATATTAAC TTTTTGTTATTTTTT TERM 513 443234 - 443193 - f 75 -9.3 -3.19653 | gap 1, opp_overlap 443193 443194 443198, overlap 443198 443200 443204 443208 TGATAATTTTATTAA CTATATATTAATTAAGATAA ATA TTATCTTAATTAATAT-TAA CTTTTTGTTATTTTT TERM 514 443194 - 443234 + F 82 -8.7 -3.87151 | opp_overlap 443193 443198 443200 443204 443208, overlap 443193 443198 GATAATTTTATTAAC TATATATTAATTAAGATAA ATA TTATCTTAATTAATATTAA CTTTTTGTTATTTTT TERM 515 443198 - 443230 + F 100 -13.9 -3.53262 | opp_overlap 443193 443198 443200 443204 443208, overlap 443194 443193 ATTTTATTAACTATA TATTAATTAAGATAA ATA TTATCTTAATTAATA TTAACTTTTTGTTAT TERM 516 443230 - 443198 - f 100 -13.9 -2.93901 | opp_overlap 443198 443194 443193, overlap 443193 443200 443204 443208 ATTTTATTAACTATA TATTAATTAAGATAA ATA TTATCTTAATTAATA TTAACTTTTTGTTAT TERM 517 443228 - 443200 - f 91 -12.1 -3.02096 | opp_overlap 443198 443194 443193, overlap 443198 443193 443204 443208 TTTATTAACTATATA TTAATTAAGATAA ATA TTATCTTAATTAA TATTAACTTTTTGTT TERM 518 443224 - 443204 - f 75 -8.5 -3.35278 | opp_overlap 443198 443194 443193, overlap 443200 443198 443193 443208 TTAACTATATATTAA TTAAGATAA ATA TTATCTTAA TTAATATTAACTTTT CJE0487 443391 - 443486 + | hypothetical protein sdhA 443615 - 445345 + | succinate dehydrogenase, flavoprotein subunit sdhB 445342 - 446307 + | succinate dehydrogenase, iron-sulfur protein subunit sdhC 446311 - 447168 + | succinate dehydrogenase, C subunit TERM 519 447190 - 447172 - Tf 100 -10.3 -4.90296 | opp_overlap 447172 AAAATTGCATAAAAA CATGGGC AAAAA GCCCATG TTTAAAGATTTAATT TERM 520 447172 - 447190 + TF 84 -10.3 -3.65084 | opp_overlap 447172 AAAATTGCATAAAAA CATGGGC AAAAA GCCCATG TTTAAAGATTTAATT CJE0491 447857 - 447192 - | TenA/Thi-4 family protein CJE0492 447835 - 447951 + | hypothetical protein acpP 447970 - 448203 + | acyl carrier protein fabF 448230 - 449444 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 521 449564 - 449553 - g 71 -3 -5.28942 | GATTTTAAAGAAAAA TCTT GAAA AAGA AATTTCTAAAACTTA accA 449446 - 450384 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 522 452443 - 452457 + F 74 -7.2 -3.98256 | overlap 452442 GCAATCTAGCTTAAG TTTTGC AGT GCAAAA TCTTTTTGATAAAAA CJE0497 452673 - 453269 + | NUDIX domain-containing protein TERM 523 453265 - 453297 + T 75 -9.3 -3.19482 | opp_overlap 453262 453265 453276, overlap 453264 453266 GAAAATTAAAGATTA TTTAGGTTAAACCTT AAA AAGGTTCAACCTAGG ATTTTAATGATCTGA TERM 524 453266 - 453296 + T 81 -10.6 -2.51207 | opp_overlap 453262 453265 453276, overlap 453265 453264 AAAATTAAAGATTAT TTAGGTTAAACCTT AAA AAGGTTCAACCTAG GATTTTAATGATCTG CJE0498 454398 - 453301 - | methyl-accepting chemotaxis protein TERM 525 453743 - 453731 - G 76 -6.3 -4.57341 | AATTTTTCGGAAAAA CTCAT AAT ATGAG CATTAGAATCTATAG CJE0499 454623 - 454408 - | hypothetical protein TERM 526 454805 - 454787 - R 77 -7.5 -4.24002 | opp_overlap 454786 454782 454803 TTGGAAATTTTAAAA TTGAGGA ATAAA TCCTCAA AATTATTTAGAATTT TERM 527 454803 - 454822 + r 76 -3.7 -5.48303 | opp_overlap 454787, overlap 454786 454782 TGAGGAATAAATCCT CAAAATT ATTTAG AATTTTG TTTTTTTAGAGTTCT rpmB 455002 - 454808 - | 50S ribosomal protein L28 TERM 528 454913 - 454929 + g 72 -4.5 -4.90079 | TGTTCTGAGATTAGG TAAAAAG CGT CTTTTTG TTTTATTGTTAGCAT rpe 455142 - 455789 + | ribulose-phosphate 3-epimerase CJE0502 455855 - 456556 + | DNA polymerase III subunit epsilon thiC 456731 - 458023 + | thiamine biosynthesis protein ThiC CJE0504 458533 - 458015 - | hypothetical protein CJE0505 459050 - 458523 - | hypothetical protein TERM 529 458615 - 458567 - G 73 -8.4 -3.39449 | opp_overlap 458581 458584 458611, overlap 458572 GTTTACTAATACTAA CAAAACGATACCACCCATTATC TAAGC GATAATAGATTGTATAGCTTTG ATCAAAGATGCTTTT TERM 530 458610 - 458572 - G 71 -4.7 -4.78753 | opp_overlap 458581 458584, overlap 458567 CTAATACTAACAAAA CGATACCACCCATTATC TAAGC GATAATAGATTGTATAG CTTTGATCAAAGATG TERM 531 458665 - 458687 + g 72 -7 -4.11371 | AGAGTAAACATTTCT CTTGTAGGAG TGA CTCCGATAAG TTTTAAGGAATATTC CJE0506 460006 - 459047 - | hypothetical protein TERM 532 459375 - 459399 + g 73 -8.7 -3.07232 | opp_overlap 459380, overlap 459370 459373 459380 TTATTTAAGGCTTCA TTGAAGTTATC TAG GGTAACTTCAG TATCATTGTTGTTGT TERM 533 459870 - 459882 + g 77 -4.9 -5.30155 | TCTAGTAAATTTTCG CTTTT ATC AAAAG TTTTTTCATTGCTAC CJE0507 460658 - 460008 - | hypothetical protein miaB 461922 - 460621 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 534 460792 - 460774 - GR 72 -7.6 -3.57561 | opp_overlap 460774 TCTTAATTCTTCAAA TAAAACTT TAA AAGTTTTA TTTTCTTGTTTTTTT TERM 535 460774 - 460792 + gr 93 -7.6 -5.25154 | opp_overlap 460774 TCTTAATTCTTCAAA TAAAACTT TAA AAGTTTTA TTTTCTTGTTTTTTT CJE0509 462161 - 461919 - | hypothetical protein TERM 536 461962 - 461974 + g 72 -7.7 -3.55447 | opp_overlap 461961 461950 TCATTATCATCAAGT CCGTA TTT TACGG TTCTATGATAAATGC TERM 537 463212 - 463192 - g 71 -2 -5.48063 | gap 1 ATTGAAGATAAAAAA GCTATTGTA AGTT TA-AATAGC GAACAAAAAAGCAAA nusA 462289 - 463377 + | transcription elongation factor NusA TERM 538 463401 - 463380 - T 86 -8.9 -4.4267 | opp_overlap 463380 GTTTAAAATTTAAAA TATTTGTGA ATTT TCACAAATA TTTTTTATAAAACCA TERM 539 463380 - 463401 + T 100 -8.9 -5.24129 | opp_overlap 463380 GTTTAAAATTTAAAA TATTTGTGA ATTT TCACAAATA TTTTTTATAAAACCA CJE0511 464580 - 463393 - | transporter, putative TERM 540 464054 - 464037 - G 75 -4.9 -5.0917 | TTACTAAAAAAGAAA TGCCTAT GAGT ATAAGCA TACAGTCAAATAAAA TERM 541 464327 - 464313 - G 76 -2.9 -5.57729 | AAATAAGACAAAAAA TAGAA ATTAA TTCTA TGCTAATCATACTGA CJE0512 464655 - 465701 + | hypothetical protein TERM 542 466039 - 466029 - g 76 -2.6 -5.64304 | GAATAGAAGAAAAAA TTTT GCA AAAA TTAAAAATCAATGCC TERM 543 466457 - 466467 + G 72 -5.4 -4.73677 | AAGGATTTATATCTT GCAA AAA TTGC TTTATTTGTTCTAGG CJE0513 465701 - 466921 + | peptidase, putative TERM 544 467124 - 467134 + G 72 -4 -5.06052 | TGTGAAGAATGGCAA GAAA ATA TTTC TTTTGTGTTTTTTCA TERM 545 468732 - 468708 - g 76 -2.9 -5.61824 | opp_overlap 468710, overlap 468710 GAAAAGGTAAAAAAA GATTTGGCA AAAAAAA TGCCAAATT AATGTCCACCATACT recG 466911 - 468734 + | ATP-dependent DNA helicase RecG CJE0515 469114 - 468731 - | hypothetical protein TERM 546 469469 - 469499 + G 82 -8.6 -3.89346 | opp_overlap 469469 AAGAAGATGGAGAAA TTTTGGAAATTGAT TTT ATTAATTTTCAAAA TTTATGCAGTGAAAA TERM 547 469548 - 469564 + G 72 -6.7 -4.07687 | ACTTATCAGCTCACT TTTTGAT AAA ATCAAAA TTTTAGAAAAGAAAT CJE0516 469210 - 469806 + | putative transcriptional regulator CJE0517 469822 - 470523 + | His/Glu/Gln/Arg/opine ABC transporter permease CJE0518 470516 - 471172 + | His/Glu/Gln/Arg/opine ABC transporter permease CJE0519 471174 - 471911 + | amino acid ABC transporter, ATP-binding protein TERM 548 472068 - 472052 - f 70 -8.7 -2.62616 | opp_overlap 472043 472064 472067 TCAGTTGGTAGAGCA GCTGCCT TGT AAGCAGC AGGTCGGGGGTTCAA TERM 549 472463 - 472447 - f 82 -10.9 -2.65815 | opp_overlap 472438 CTCAGAGGTAGAGCA CTCCCTT GGT AAGGGAG AGGTCGCGGGTTCAA TERM 550 473357 - 473337 - g 77 -8.3 -3.78962 | overlap 473340 TTAAAGATACTCAAA CAACAACTG TAA CAGGTGTTG AAATGTTCAGAAAAG tuf 472565 - 473764 + | elongation factor Tu TERM 551 473772 - 473754 - f 70 -6.2 -4.07568 | opp_overlap 473754 473769 473770, overlap 473770 GTGTTGTTTCTAAAA TTATTAAA TAA TTTAATAA AGCCAAGTTAAAAGC TERM 552 473769 - 473797 + F 100 -9.7 -5.00884 | opp_overlap 473754 473770 473774, overlap 473770 TTATTAAATAATTTA ATAAAGCCAAGTT AAA AGCTTGGCTTTAA TTTTTTAAGGAAAAT TERM 553 473770 - 473796 + F 100 -13.2 -3.60048 | opp_overlap 473754 473770 473774, overlap 473769 TATTAAATAATTTAA TAAAGCCAAGTT AAA AGCTTGGCTTTA ATTTTTTAAGGAAAA TERM 554 473796 - 473770 - f 87 -11 -3.3458 | opp_overlap 473770 473769, overlap 473754 473774 TATTAAATAATTTAA TAAAGCCAAGTT AAA AGCTTGGCTTTA ATTTTTTAAGGAAAA TERM 555 473792 - 473774 - f 77 -7.4 -4.29977 | opp_overlap 473770 473769, overlap 473770 AAATAATTTAATAAA GCCAAGTT AAA AGCTTGGC TTTAATTTTTTAAGG rpmG 473817 - 473975 + | 50S ribosomal protein L33 TERM 556 474115 - 474091 - g 72 -4.5 -4.88295 | AAATAAATGGAAAAA TTAATAACTTA TTT TAAATTATCAA AAGCCGAATTAAGGA secE 474082 - 474261 + | preprotein translocase subunit SecE TERM 557 474666 - 474654 - g 72 -6.3 -4.24123 | TGAAGAAGGGGAAAA TGTGA GAA TCACA GAAGGGCCATTTGCA TERM 558 474775 - 474799 + G 75 -7.3 -4.18042 | ACTCCAGTGGAGATC TTATATTCTCA AGT TGAGAAAATAA TTTAATTTATATCAA nusG 474271 - 474804 + | transcription antitermination protein NusG rplK 474830 - 475255 + | 50S ribosomal protein L11 TERM 559 475279 - 475257 - f 70 -8.5 -2.56743 | overlap 475256 AAATCGTAGATTAAT CCTTTCACC GCCAA GGTAAAAGG CGGTAGCACTTTAAA rplA 475310 - 476011 + | 50S ribosomal protein L1 TERM 560 476031 - 476012 - f 80 -7.9 -4.04806 | opp_overlap 476012 CTTGATATGAAATAA GAGTTGC TTTTTT GCAACTC TTTTGTTTTAAAATA TERM 561 476012 - 476031 + F 95 -7.9 -5.09259 | opp_overlap 476012 CTTGATATGAAATAA GAGTTGC TTTTTT GCAACTC TTTTGTTTTAAAATA TERM 562 476045 - 476083 + F 82 -7.8 -4.27584 | opp_overlap 476045, overlap 476049 TCTTTTGTTTTAAAA TAAACATTTGAAAAAATT TTT GATTTTTTGAGATGTTTA TTTTAGATTGAAGAT rplJ 476163 - 476642 + | 50S ribosomal protein L10 TERM 563 477017 - 477002 - g 72 -4 -5.17576 | GAGGAAGCTAAAAAA CAACTT GAAG AAGCTG GTGCTAAAGTAGAAC rplL 476663 - 477040 + | 50S ribosomal protein L7/L12 TERM 564 477085 - 477062 - f 72 -8.2 -3.47349 | opp_overlap 477062, overlap 477065 GCTTTAAAGTTAGAA GAAGATTTGC CAAG GCAAGTCTTC TTTTTTTATTTTTAC TERM 565 477062 - 477085 + F 100 -10.4 -6.20267 | opp_overlap 477062 477065 GCTTTAAAGTTAGAA GAAGATTTGC CAAG GCAAGTCTTC TTTTTTTATTTTTAC TERM 566 480297 - 480283 - g 79 -5.8 -5.1101 | opp_overlap 480271, overlap 480271 CGATGATTTAAAAAA TCATTT CCA AAATGA GAAGAAAAAATTAAA rpoB 477149 - 481285 + | DNA-directed RNA polymerase subunit beta TERM 567 482480 - 482458 - g 74 -3.4 -5.47218 | opp_overlap 482457 GTTTACCTAAAAAAA TGGCTTTAGA GCT TTTTAAGCCA CATCTTTTAGCTAAG TERM 568 482519 - 482508 - g 72 -4.4 -5.08088 | AAGCTTGAAGAAAAA GGTT ATGC AACC ACAGTAAAACAAGCT TERM 569 482950 - 482965 + G 74 -7.6 -3.77831 | ATGAAGTGATGATGG CACTTG AAAG CAAGTG TTTGGATATTCATGC TERM 570 485007 - 484983 - g 100 -11.5 -4.28361 | GTAATTGCAGGAAAA GGTGATAAAGC TGT GCGTTATCACC TTGAACCAAAAACCG rpoC 481278 - 485831 + | DNA-directed RNA polymerase, beta' subunit TERM 571 485870 - 485834 - T 74 -4.6 -5.01823 | gap 1, opp_overlap 485842, overlap 485829 AGAACAAGAATAAAA CTCTATT-TTATAGCCC TTCG GGGCTATATTAATACAG TGTATCTAAATCATT TERM 572 485842 - 485861 + T 85 -10.8 -3.18239 | opp_overlap 485829 485834 AATAAAACTCTATTT TATAGCCC TTCG GGGCTATA TTAATACAGTGTATC CJE0530 486623 - 485862 - | IclR family transcriptional regulator CJE0531 486771 - 486631 - | hypothetical protein TERM 573 486706 - 486719 + g 76 -2.5 -5.61596 | ATAATTTTTATTATT TATTA ATTT TAATA TTTTTTTGTAAAAAT CJE0532 486853 - 487761 + | dihydrodipicolinate synthase, putative TERM 574 488396 - 488380 - f 86 -8.1 -4.72272 | TGGTGGTAGTAAAAA TACCATT GAA AATGGTA TCAAAATAGTCAATG TERM 575 489409 - 489425 + G 90 -8.1 -4.89063 | ATAGGTTATGCCATT TTTGAAG TGC CTTCAAA TTTATTTTTGCATAA CJE0534 489202 - 490488 + | tartrate transporter, putative CJE0535 490489 - 491277 + | short chain dehydrogenase TERM 576 492410 - 492423 + G 72 -5.3 -4.73613 | GGTGGAGCAATTATG CCTAT AATT ATAGG TTTTATTAATGATCA fucP 491288 - 492544 + | L-fucose permease TERM 577 492705 - 492750 + G 95 -7.7 -5.34857 | opp_overlap 492711, overlap 492710 492714 AATAGTGATGATTTA GAAAAAGAAGCTTTGTTTGCT TTGG AGCAAAAAAAGCTTCATAATC TTTTGTTTTGTTTAG TERM 578 492710 - 492745 + G 81 -10.6 -3.08124 | opp_overlap 492711, overlap 492705 492714 TGATGATTTAGAAAA AGAAGCTTTGTTTGCT TTGG AGCAAAAAAAGCTTCA TAATCTTTTGTTTTG TERM 579 492744 - 492711 - g 100 -14.1 -4.88736 | opp_overlap 492710 492705 492714 GATGATTTAGAAAAA GAAGCTTTGTTTGCT TTGG AGCAAAAAAAGCTTC ATAATCTTTTGTTTT TERM 580 492714 - 492741 + G 80 -10 -3.3341 | opp_overlap 492711, overlap 492710 492705 GATTTAGAAAAAGAA GCTTTGTTTGCT TTGG AGCAAAAAAAGC TTCATAATCTTTTGT TERM 581 493036 - 493054 + G 77 -7.6 -4.128 | overlap 493034 AAAAAGATTTAAGTT TTTTGAAA AAA TTTCAAAA TTTATATATCAAGCT CJE0537 492528 - 493298 + | hypothetical protein CJE0538 493299 - 493616 + | hypothetical protein TERM 582 494071 - 494082 + G 72 -4.4 -5.1356 | GGTGGAATTTTACCT TGGA ATTT TCCA TTTTTCTTAATCGCA aldA 493630 - 495069 + | aldehyde dehydrogenase A TERM 583 495075 - 495100 + F 74 -7.7 -3.89291 | overlap 495076 TAAACAATGATTTTT ATCCTATCTAA ATTT TTAGATAGGAG TTATTATAATCTTGG TERM 584 495076 - 495099 + F 84 -11.2 -2.92851 | overlap 495075 AAACAATGATTTTTA TCCTATCTAA ATTT TTAGATAGGA GTTATTATAATCTTG TERM 585 495458 - 495439 - g 70 -3.6 -5.10077 | overlap 495441 AAAGAGCGCAAAAAA GTTTTAGA AAAA TCTAAATC TCCAGCGCTTAAAAA rpsL 495397 - 495783 + | 30S ribosomal protein S12 rpsG 495853 - 496323 + | 30S ribosomal protein S7 fusA 496336 - 498411 + | elongation factor G TERM 586 498420 - 498435 + F 93 -10.4 -4.10164 | overlap 498405 CGGTTAAATTTTTTA GCGGGA TTTT TCCCGC TTTCTGTCCTCGTAG TERM 587 498587 - 498603 + F 73 -2.3 -5.72118 | opp_overlap 498587, overlap 498600 TTCTACATTAAAATT TTTCATT ATG ATTGAAA TTTTTTCTATTTTTT TERM 588 499604 - 499637 + G 72 -6.2 -4.35518 | opp_overlap 499602 499604 GAGATAAAAAGTATA TTTTCGCTAATAAT AATGGA ACTATTAGCGAGAA TTTTGCTGTAAGATT CJE0544 498700 - 499902 + | phage integrase family site specific recombinase CJE0545 500069 - 499899 - | DNA binding domain-containing protein CJE0546 500604 - 500062 - | pentapeptide repeat-containing protein CJE0547 500805 - 500614 - | hypothetical protein CJE0548 501799 - 501182 - | phage anti-repressor protein, putative TERM 589 501927 - 501898 - R 89 -8.1 -4.89562 | opp_overlap 501897 501898 501917 501918 501924, overlap 501900 501902 501916 501918 501924 TTAAAAGTAATAAAA TGTATTTTTCTCA AAAA TGAGAAAAATAAA ATTAGTTTTATTTTT TERM 590 501925 - 501900 - R 82 -10.7 -2.69639 | opp_overlap 501898 501897 501917 501918 501924, overlap 501898 501902 501916 501918 501924 AAAAGTAATAAAATG TATTTTTCTCA AAAA TGAGAAAAATA AAATTAGTTTTATTT TERM 591 501923 - 501902 - R 73 -8.9 -2.86514 | opp_overlap 501898 501897 501917 501918, overlap 501900 501898 501916 501918 AAGTAATAAAATGTA TTTTTCTCA AAAA TGAGAAAAA TAAAATTAGTTTTAT TERM 592 501918 - 501943 + r 74 -9.3 -3.08002 | opp_overlap 501902 501900 501898 501918 501916 501924, overlap 501898 501897 501917 501924 TTTTCTCAAAAATGA GAAAAATAAAA TTAG TTTTATTTTTC CTTTATATCATTAAT TERM 593 501943 - 501918 - R 75 -9.3 -3.23708 | opp_overlap 501898 501897 501917 501918 501924, overlap 501902 501900 501898 501916 501924 TTTTCTCAAAAATGA GAAAAATAAAA TTAG TTTTATTTTTC CTTTATATCATTAAT CJE0549 502330 - 501935 - | hypothetical protein CJE0550 503126 - 502374 - | site-specific DNA-methyltransferase, putative CJE0551 503547 - 503107 - | hypothetical protein CJE0552 503732 - 503622 - | hypothetical protein TERM 594 503703 - 503689 - G 74 -6.4 -4.44915 | GAAGTATCTATAAAA GAGCAA GTA TCGCTC AACTTTAATATTAAT CJE0553 504053 - 503790 - | hypothetical protein CJE0554 504729 - 504034 - | hypothetical protein CJE0555 505466 - 504729 - | hypothetical protein TERM 595 505207 - 505217 + g 72 -4 -5.06472 | GCCACTTCTGTTTTT GTAA TAC TTAC TTTTCTTATTTGTCT CJE0556 506322 - 505468 - | hypothetical protein CJE0557 506551 - 506324 - | hypothetical protein TERM 596 506507 - 506520 + g 85 -3.9 -5.70522 | opp_overlap 506507 TCCATTTTTTAATAA TAGTT CTAA AACTA TTTTTTCTTGTTGTT CJE0558 506799 - 506542 - | hypothetical protein CJE0559 507059 - 506790 - | hypothetical protein CJE0560 507393 - 507286 - | hypothetical protein CJE0561 507893 - 507621 - | hypothetical protein CJE0562 508148 - 508843 + | hypothetical protein CJE0563 509233 - 508862 - | hypothetical protein TERM 597 509246 - 509259 + r 70 -3.9 -5.243 | opp_overlap 509256 CATCAAATTTTTCAT TTTCT ATAT AGAAA TTTTTTCCTAATTTA CJE0564 509756 - 509223 - | hypothetical protein CJE0565 510418 - 509753 - | hypothetical protein CJE0566 511151 - 510498 - | DNA/RNA non-specific endonuclease TERM 598 511073 - 511049 - G 71 -8.7 -2.78088 | opp_overlap 511049 511040, overlap 511048 511037 AAACTTGCGAACAAC TTTGCTTAGTA AAA TACTTAGCAAA CTCTTCGCTTGGTTT TERM 599 511049 - 511073 + g 70 -8.7 -2.508 | opp_overlap 511048 511037 511049, overlap 511040 AAACTTGCGAACAAC TTTGCTTAGTA AAA TACTTAGCAAA CTCTTCGCTTGGTTT CJE0567 511849 - 511157 - | hypothetical protein TERM 600 511486 - 511496 + g 81 -2.6 -5.68438 | opp_overlap 511486, overlap 511477 511476 CAGTATCTATTAAAT TAAT AGC ATTA TTTTTTATTTCCTCG TERM 601 511529 - 511541 + g 72 -4.9 -4.93595 | TCTTATATTTCTTTC TTTTG ATT CAAAA TTTTTAAATTTTTCT CJE0568 512645 - 511857 - | hypothetical protein CJE0569 513376 - 512642 - | phage repressor protein, putative TERM 602 513312 - 513328 + g 72 -5.3 -4.70659 | TTTTTATCTCTATTT TTTAAAT AAA ATTTAAA TTTTTCAGTATCAAA TERM 603 513440 - 513468 + H 71 -4.7 -4.84219 | opp_overlap 513440 AATGTTCCATAATTA GAAACATAATTAA ATA TTTATTAAGTTTC TTTATTTTATACTTT TERM 604 513618 - 513600 - g 100 -9 -5.04249 | opp_overlap 513604, overlap 513596 GCTTTAAAAAACAAA TAGAGTTT AAA AAACTCTA TGGAATACCTCATGA CJE0570 513488 - 513712 + | hypothetical protein TERM 605 514119 - 514103 - g 71 -6.7 -4.00934 | ATCGCAAAGAGCAAA GAAAAAT AGG ATTTTTC AAAAGGTTTTTTTTA CJE0571 513709 - 514137 + | hypothetical protein TERM 606 514196 - 514227 + G 77 -4.5 -5.2166 | CAATCGCGTATTCTT TACCGCAGGCA TTTTGACTCT TGCTTGTGGTA TTTTTTCAATTATTC CJE0572 514134 - 514511 + | putative lipoprotein CJE0573 514508 - 515509 + | hypothetical protein TERM 607 515888 - 515867 - g 72 -4.5 -4.88646 | opp_overlap 515871, overlap 515871 AAAAATTAAAATAAA TCAAGAATC TATT GATTCTTTA ATTTGCATCAATGCT TERM 608 516157 - 516130 - g 81 -6.5 -5.07567 | opp_overlap 516147, overlap 516147 GTAGATTTGAAAAAA TTCTTAAAAGC AAAATG GCTTTTAAAAA TATAAGCTAAATTTA CJE0574 515520 - 516167 + | hypothetical protein CJE0575 516185 - 516565 + | hypothetical protein CJE0576 516565 - 516951 + | hypothetical protein CJE0577 516948 - 518240 + | terminase B protein, putative CJE0578 518230 - 518502 + | hypothetical protein CJE0579 518483 - 520021 + | hypothetical protein CJE0580 520014 - 520217 + | hypothetical protein CJE0581 520207 - 520854 + | hypothetical protein CJE0582 520865 - 521242 + | hypothetical protein TERM 609 521286 - 521303 + F 70 -5.5 -4.73297 | opp_overlap 521274 521282, overlap 521274 521287 AAAGGGTAAATCTTA ACCCCTT GTAT AAGGGGC TTTGTTTATTGATTG TERM 610 521287 - 521302 + F 77 -9 -3.42352 | opp_overlap 521274 521282, overlap 521274 521286 AAGGGTAAATCTTAA CCCCTT GTAT AAGGGG CTTTGTTTATTGATT TERM 611 521436 - 521411 - f 87 -11.9 -2.52896 | opp_overlap 521406 521418 CTAGGTGGTAATTTA GTGCTAAGGGT GGCG ACCCTTGGCAC CACACCTTTTAAAAT CJE0583 521507 - 522718 + | hypothetical protein CJE0584 522718 - 526419 + | hypothetical protein CJE0585 527543 - 526698 - | hypothetical protein CJE0586 527759 - 527553 - | hypothetical protein CJE0587 527979 - 529013 + | hypothetical protein CJE0588 529013 - 529417 + | hypothetical protein TERM 612 529530 - 529518 - g 95 -7.7 -5.34555 | TTAGATGATAAAAAA TGGCT TTT AGCCA TGGATGATCTGCTTT CJE0589 529395 - 529592 + | hypothetical protein CJE0590 529595 - 532237 + | hypothetical protein CJE0591 532338 - 532688 + | hypothetical protein CJE0592 532701 - 533336 + | hypothetical protein CJE0593 533333 - 533716 + | hypothetical protein CJE0594 533709 - 534083 + | hypothetical protein CJE0595 534080 - 535360 + | hypothetical protein CJE0596 535302 - 535409 + | hypothetical protein TERM 613 535435 - 535451 + G 71 -7.3 -3.76176 | opp_overlap 535433 535435 AATTAATAGAAGATA CACAGGT AAA ACTTGTG TTATTGGTAAATTTA CJE0597 535409 - 535867 + | hypothetical protein CJE0598 535929 - 536348 + | hypothetical protein CJE0599 536266 - 536463 + | hypothetical protein TERM 614 536559 - 536546 - g 78 -6.7 -4.62336 | opp_overlap 536545 536546 AGTTTAGCGGAAAAA TCTCC ATTT GGAGA ATTTAAAAAGCTTTT TERM 615 536655 - 536608 - g 72 -6.4 -4.33248 | gap 1, opp_overlap 536624 536625, overlap 536625 TAATGTTATAAGAAA TGACCAACAATTTC-AAAGCTTG GCA CAAGCGTTGGTAAGTGTTGGACA AACCATAGTGGCTCA TERM 616 536637 - 536625 - g 74 -7.7 -3.72453 | opp_overlap 536624 536625, overlap 536608 ACCAACAATTTCAAA GCTTG GCA CAAGC GTTGGTAAGTGTTGG TERM 617 536781 - 536771 - g 71 -3.2 -5.26155 | ACAGAAACAGAAAAA GCAA AAC CTGC ATTAATAGCTAGACA CJE0600 536456 - 536947 + | hypothetical protein TERM 618 536993 - 536966 - f 90 -7 -5.24989 | opp_overlap 536966 536988 TTATAGATGAAAAAA GGCTTATGAGAA ATTA TACTCTTAAGCC TGCTTATCTATCAAA CJE0601 537061 - 538671 + | hypothetical protein CJE0602 538788 - 538937 + | hypothetical protein TERM 619 539474 - 539460 - g 88 -8.6 -4.43392 | overlap 539457 539464 539466 TGAAAATGAAAATAA CAAAGC TTT GCTTTG TACATACACATCAAA TERM 620 539491 - 539464 - g 75 -5.6 -4.71463 | overlap 539460 539457 539466 AATGAAAATAACAAA GCTTTGCTTTGT ACAT ACACATCAAAGC AAAAAAGCAAGACTT CJE0603 538943 - 539644 + | hypothetical protein TERM 621 539791 - 539779 - gf 70 -6.3 -4.02534 | ATTTAAATTTAGAAA GCAAA GAA TTTGC TGAAAAATACTTGAG CJE0604 539634 - 540008 + | hypothetical protein TERM 622 540390 - 540379 - gf 78 -4.4 -5.4505 | GCTTTTAACAAAAAA GGAT AGTG ATCC TAGAAATTTAGAGCT CJE0605 539981 - 541258 + | putative lipoprotein trpC 541255 - 542031 + | indole-3-glycerol phosphate synthase TERM 623 542482 - 542500 + G 74 -6.1 -4.4267 | opp_overlap 542481 GGCACTAATATAGAG CAAGTTT ATCAA AAACTTG TTTTGGCTTTTAAAA CJE0607 542041 - 542526 + | Hit family protein TERM 624 543084 - 543074 - g 70 -5.4 -4.68424 | opp_overlap 543076 CAACCTACGCAAAAA GCTT TTG AAGC AGAACTTTTTCACAA TERM 625 543140 - 543118 - g 83 -7.8 -4.54477 | opp_overlap 543104 543103, overlap 543103 543135 TCAAAATTTAGAAAA TTTTGCTTTC ATA GAAAGCGAAA GTCGCAAAATAGGGG TERM 626 543145 - 543135 - g 71 -6.8 -4.03234 | overlap 543118 TTGCTTTCATAGAAA GCGA AAG TCGC AAAATAGGGGATATT CJE0608 542516 - 543514 + | tRNA 2-selenouridine synthase hemH 545995 - 545084 - | ferrochelatase CJE0611 546858 - 545992 - | Gfo/Idh/MocA family oxidoreductase CJE0612 547936 - 546863 - | DegT/DnrJ/EryC1/StrS aminotransferase family protein TERM 627 547820 - 547803 - G 72 -4.1 -5.1615 | TTAACACCTAAAAAA TGAGCTA AATT TTGCTCA AATTCGTTAAGCTTT TERM 628 548159 - 548169 + G 72 -6.8 -4.1413 | CTTTTTACCAATGCG GGCA TGG TGCC TTTTAAAAGTATATT TERM 629 550099 - 550117 + G 80 -9 -3.86897 | TATTGAAGCTGTGGT TTCTAAAG CGG CTTTAGAA TTTGTAAAAAATCAA alaS 548051 - 550579 + | alanyl-tRNA synthetase TERM 630 550613 - 550655 + G 100 -9.4 -4.51174 | opp_overlap 550612 550617 GTTCCATTTCAAGAG CTAACTTGCTTAAAACCG CAAAGAT TGATTTTAGGCAAGTTAG TTTTGATTATGATGA maf 550579 - 551130 + | Maf-like protein TERM 631 551478 - 551464 - g 74 -8.6 -3.23708 | opp_overlap 551463, overlap 551462 GCGGTGGAAAAACCA TGGAAG GAG CTTCCA CTCTTACCCAGCAAT pbpA 551127 - 553058 + | penicillin-binding protein 1A TERM 632 553046 - 553091 + T 81 -5.2 -5.22794 | gap 2, opp_overlap 553053 553061 553064, overlap 553048 553053 553061 ATTTAATGAAAGCGA GATTA-T-ATTTTGAAAGTAGA AAGA TCTACTTTCAAAATGATTAAGC TTTTTTGATGATTAT TERM 633 553053 - 553082 + T 100 -13.9 -2.80411 | opp_overlap 553053 553061 553064, overlap 553048 553046 553061 GAAAGCGAGATTATA TTTTGAAAGTAGA AAGA TCTACTTTCAAAA TGATTAAGCTTTTTT TERM 634 553082 - 553053 - T 100 -13.9 -2.88236 | opp_overlap 553053 553048 553046 553061, overlap 553061 553064 GAAAGCGAGATTATA TTTTGAAAGTAGA AAGA TCTACTTTCAAAA TGATTAAGCTTTTTT clpB 555659 - 553086 - | ATP-dependent chaperone protein ClpB CJE0617 556061 - 555771 - | hypothetical protein ctpA 556188 - 557522 + | carboxyl-terminal protease TERM 635 557729 - 557715 - g 78 -4.2 -5.40072 | opp_overlap 557715 TTTGCTCGAAAAAAA TGGGAT TAA AACCCA TTTGGTAGAAACTAT purC 557524 - 558234 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 636 558389 - 558373 - g 72 -5.2 -4.76478 | overlap 558367 CAAAACAAATCAAAA TTTCTC TTGAT GAGAAA GATGAAAAATTAGCC purS 558243 - 558488 + | phosphoribosylformylglycinamidine synthase, purS protein purQ 558490 - 559137 + | phosphoribosylformylglycinamidine synthase subunit I CJE0622 559221 - 560330 + | hypothetical protein TERM 637 560930 - 560900 - g 81 -8.5 -4.09685 | GCGGAGTGCTTAAAA TCATTTGTATGGA TTTAG TCGATACAAATGA TGACAAATGGCTTGA CJE0623 560311 - 561003 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative TERM 638 561183 - 561211 + G 81 -6.1 -5.03747 | opp_overlap 561170 AATAAAGGTTTATCT CCTTTACTTAAAA GCT TTATAAGTACAGG TTTTTTAGGAGCTTT CJE0624 560997 - 561365 + | hypothetical protein TERM 639 561865 - 561849 - g 79 -5.2 -5.26875 | opp_overlap 561849 561858 GTTTTAAGTAAAAAA GCTTTA GATGA TAAAGC TTATCTTTGGAGTTC htpG 561438 - 563264 + | heat shock protein 90 TERM 640 563331 - 563308 - g 77 -8.2 -3.79505 | AAAGCAAGATTTAAA CGCATATCAA ATTT TTGATGTGCG CACTCCTTTAGAATG CJE0626 563261 - 563578 + | hypothetical protein CJE0627 563578 - 564012 + | hypothetical protein CJE0628 564133 - 565785 + | Na/Pi-cotransporter, putative CJE0629 567539 - 565800 - | penicillin-binding protein TERM 641 566113 - 566140 + g 88 -3.4 -6.12458 | overlap 566114 ATAAGAACATTTTGC ATCGTTTTAGCG GCTT CGCTAGAAAGAA TTTTTTCTTTTTTTA TERM 642 566114 - 566139 + g 74 -6.9 -4.21984 | overlap 566113 TAAGAACATTTTGCA TCGTTTTAGCG GCTT CGCTAGAAAGA ATTTTTTCTTTTTTT fliE 567893 - 567597 - | flagellar hook-basal body protein FliE flgC 568394 - 567900 - | flagellar basal body rod protein FlgC flgB 568835 - 568404 - | flagellar basal body rod protein FlgB CJE0633 569817 - 568915 - | hypothetical protein TERM 643 569054 - 569034 - G 82 -6.9 -4.98531 | TCTTTAAAGGAAAAA TAGCTGC ACGAATA GCAGCTA AAGAAACATTACAAA TERM 644 569456 - 569439 - G 85 -5.6 -5.40072 | TTTCTGGTAAAAAAA CTCCTT CATCAT AAGGAG CTTGAGCTTGAAATT TERM 645 570278 - 570266 - g 77 -4.9 -5.21709 | opp_overlap 570266 GCTGATATTAAAAAA CTTTT ATT AAAAG ATTATGATTTAAGTA TERM 646 571043 - 571025 - g 77 -7.6 -4.13304 | overlap 571013 AAAGCATTTGTAAAA TTAAATCA AAA TGATTTAA ATATAGAAAATGCCA CJE0634 569831 - 572401 + | hypothetical protein TERM 647 572444 - 572405 - f 77 -6 -4.88407 | opp_overlap 572398 572406 572407 572413, overlap 572398 572407 TTACTTAATTAAAAA TATTTAAAGTTTGTTTGA AAAC TAAAACAAACTTTAAACT TACTCTTGCATTTTT TERM 648 572407 - 572442 + F 82 -10.8 -2.63637 | opp_overlap 572398 572405 572407, overlap 572398 572406 572413 ACTTAATTAAAAATA TTTAAAGTTTGTTTGA AAAC TAAAACAAACTTTAAA CTTACTCTTGCATTT TERM 649 572442 - 572407 - f 93 -10.8 -4.06004 | opp_overlap 572398 572407 572406 572413, overlap 572398 572405 ACTTAATTAAAAATA TTTAAAGTTTGTTTGA AAAC TAAAACAAACTTTAAA CTTACTCTTGCATTT icd 572518 - 574722 + | isocitrate dehydrogenase, NADP-dependent TERM 650 575002 - 575016 + G 70 -8.6 -2.64099 | opp_overlap 575000 575002, overlap 575001 TGCTTCAGTTAAATA CAAGCA TTA TGCTTG ATTGTGCTAAAAAAA TERM 651 575016 - 575002 - g 76 -8.6 -3.40597 | opp_overlap 575002 575001, overlap 575000 TGCTTCAGTTAAATA CAAGCA TTA TGCTTG ATTGTGCTAAAAAAA mdh 574719 - 575621 + | malate dehydrogenase sucC 575622 - 576785 + | succinyl-CoA synthase, beta subunit sucD 576795 - 577664 + | succinyl-CoA synthase, alpha subunit TERM 652 577666 - 577654 - f 70 -3.5 -5.25805 | AAGAAATTCAAAAAA TATTA GGT TAATA AAGGAAAAAACATGA TERM 653 577761 - 577771 + G 81 -8.2 -4.2349 | TTGTGTTAGCTATTG CCCC GCT GGGG TTTTAGCTATGCGCG oorD 577678 - 577989 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorD TERM 654 578240 - 578214 - g 72 -6.5 -4.2717 | opp_overlap 578214 578213 ATGAGTGGAGTAAAA TCCATGACTGC AAGTA GCGGTCCTGGA ATTTCTTTAAAAGCA TERM 655 578214 - 578240 + G 74 -8.7 -3.24488 | opp_overlap 578214, overlap 578213 ATGAGTGGAGTAAAA TCCATGACTGC AAGTA GCGGTCCTGGA ATTTCTTTAAAAGCA TERM 656 579033 - 579043 + G 80 -6.8 -4.84642 | opp_overlap 579032 ATTGAAAGAGTAACT TCGC GTC GCGA TTTTATTAGTTTGCA oorA 577998 - 579122 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorA oorB 579123 - 579968 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorB oorC 579965 - 580522 + | 2-oxoglutarate-acceptor oxidoreductase subunit OorC TERM 657 580522 - 580548 + F 83 -11 -2.64938 | opp_overlap 580514 580523 580527, overlap 580527 AAAACCATATTCATA ATAAATTCCGCA TCA TGCGGAATTTAA CTTCTAAAATTTTAC TERM 658 580547 - 580523 - f 100 -14.5 -3.41414 | opp_overlap 580522 580527, overlap 580514 580527 AAACCATATTCATAA TAAATTCCGCA TCA TGCGGAATTTA ACTTCTAAAATTTTA TERM 659 580527 - 580543 + F 89 -10.9 -3.80893 | opp_overlap 580527 580523, overlap 580522 CATATTCATAATAAA TTCCGCA TCA TGCGGAA TTTAACTTCTAAAAT TERM 660 580543 - 580527 - f 93 -10.9 -4.34488 | opp_overlap 580522 580527, overlap 580523 CATATTCATAATAAA TTCCGCA TCA TGCGGAA TTTAACTTCTAAAAT CJE0643 580661 - 580924 + | hypothetical protein CJE0644 580927 - 581463 + | hypothetical protein TERM 661 582261 - 582248 - g 79 -5.3 -5.29445 | opp_overlap 582246 582248 TTTGAAGAACAAAAA GCTTT AGAA AAAGC TATTTTAGAAGCTAA CJE0645 581477 - 582370 + | polyprenyl synthetase family protein TERM 662 582640 - 582661 + G 90 -7.3 -5.36441 | opp_overlap 582644 GCTGATATTTTTGAA GATAGTGGA GCAA TCCACCATC TTTTTTCTGTAGCAA hemA 582370 - 583668 + | glutamyl-tRNA reductase proS 583652 - 585361 + | prolyl-tRNA synthetase TERM 663 585455 - 585472 + G 82 -7.1 -4.75404 | GTAATTTTTTATTTT TCATACT TTTG AGTATGA TTTTTGGTGCGGTTT CJE0648 585358 - 585747 + | hypothetical protein hemC 585744 - 586667 + | porphobilinogen deaminase TERM 664 587575 - 587565 - g 72 -2.6 -5.42265 | TGAAAGTAGAAAAAA TTTA TGC TAAA AAAGATGCGATCTAT CJE0650 586664 - 588466 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative flaG 588622 - 588987 + | flagellar protein FlaG TERM 665 589148 - 589134 - g 72 -2.9 -5.39681 | ACAACCAAACAAAAA GATTT AACAG AAATC AAAACTAAATTACTA fliD 588990 - 590900 + | flagellar capping protein fliS 590912 - 591298 + | flagellar protein FliS TERM 666 591532 - 591504 - g 76 -2.6 -5.64328 | gap 1, overlap 591505 591506 AAGAAAAAAACAAAA GC-TGTTGAAATT CAAA AATTTCAAAAAGC GTTGACATATTTTAA CJE0654 591279 - 591554 + | hypothetical protein efp 591986 - 592555 + | elongation factor P CJE0656 592715 - 593407 + | hypothetical protein TERM 667 593926 - 593940 + G 78 -4.2 -5.38054 | TACCGCAAATTTTGG CTACAC TTG GGGTAG TTTTTGTTTCTACAG CJE0657 593394 - 594347 + | hypothetical protein TERM 668 594987 - 595006 + G 71 -7.2 -3.73042 | GCTTTAGAGCCTTGT GGAGATGA GTTT TTATCTCC TGTTTTGATGGAAGC CJE0658 594357 - 595361 + | hypothetical protein TERM 669 595452 - 595470 + F 70 -6.2 -4.10161 | AAATATATTTTTTGA TATTATAA GCC TTATAATA TTTTAAAGGATGATA TERM 670 596570 - 596581 + G 74 -2.2 -5.64304 | CAAGCAGTGGATTAA GCGA GGCA TTGC TTTTTTCTTGTATTG CJE0659 595486 - 596772 + | hypothetical protein CJE0660 596783 - 597580 + | hypothetical protein CJE0661 598662 - 597577 - | hypothetical protein proA 599891 - 598659 - | gamma-glutamyl phosphate reductase CJE0663 599962 - 600897 + | pyridine nucleotide-disulphide oxidoreductase family protein TERM 671 600894 - 600923 + T 95 -9.5 -4.6038 | opp_overlap 600900, overlap 600900 600913 AATTCTTTCTGTGCT TTAAAATTTAGCC TTTG GGCTAAATTTTTA TTTTAGTTTAATCTA TERM 672 600917 - 600900 - T 83 -8.5 -4.07568 | opp_overlap 600894 600900 600913 TTCTGTGCTTTAAAA TTTAGCC TTTG GGCTAAA TTTTTATTTTAGTTT TERM 673 600900 - 600917 + T 100 -8.5 -5.56372 | opp_overlap 600900, overlap 600894 600913 TTCTGTGCTTTAAAA TTTAGCC TTTG GGCTAAA TTTTTATTTTAGTTT TERM 674 601698 - 601708 + T 70 -5.4 -4.56978 | TTAGGTGGTATTTTT GGAA TTT TTCC TTTCTTGTTTCAAAA TERM 675 602415 - 602391 - T 72 -7.3 -3.65722 | opp_overlap 602391 AAAAGAATTTTTAAA GATCTATCT TTATAGG AGATAGATC TTTTTTAAATTTTAT TERM 676 602391 - 602415 + T 100 -8.7 -5.28315 | opp_overlap 602391 AAAAGAATTTTTAAA GATCTATCTTT ATA GGAGATAGATC TTTTTTAAATTTTAT CJE0666 603382 - 602453 - | hypothetical protein TERM 677 604034 - 604020 - g 76 -2.9 -5.54079 | opp_overlap 604020 TTAAAAAGCAAAAAA CTTTA GAAAA TAAAG GTATTATAGGGCTTG dnaB 603536 - 604912 + | replicative DNA helicase CJE0668 605017 - 605577 + | hypothetical protein CJE0669 605568 - 605774 + | hypothetical protein TERM 678 606464 - 606478 + G 79 -5.8 -5.08824 | TATTAAAGAGTTAGT CAATAA AAC TTATTG TTTTTTAAATGAAGG CJE0670 605904 - 606971 + | GTP-binding protein CJE0671 606982 - 607152 + | hypothetical protein CJE0672 607166 - 607471 + | hypothetical protein CJE0674 608545 - 609417 + | transcriptional regulator, putative TERM 679 609464 - 609476 + F 75 -9.1 -3.28712 | GGGGAGATTTGAACT CCCGA CCT TCGGG TTATGAGCCCGACGA TERM 680 610613 - 610603 - g 72 -4 -5.10767 | TACTCAATACAAAAA CTAT GGT ATAG GAGCACAGATTTTAA ribB 609716 - 610735 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein CJE0676 610747 - 611190 + | GatB/Yqey family protein TERM 681 611800 - 611783 - g 71 -7.1 -3.76839 | TAAGGGTAACTCAAA GCAAATT AAAA AATTTGC AGAGCTTTTAAAAGA ilvB 611208 - 612908 + | acetolactate synthase 3 catalytic subunit ilvH 612905 - 613369 + | acetolactate synthase 3 regulatory subunit TERM 682 613575 - 613554 - g 78 -6.7 -4.52347 | TAAAGAATATGAAAA TTTAGTACC TAAA GATACTAAA GCTTTGATTACTCAA lpxD 613366 - 614331 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 683 614338 - 614379 + T 70 -8.2 -3.21938 | overlap 614339 614369 CAAGATTAACATCGC ATCGCCATAAGAGTAAAA GCGATA TTTTTCTTTTATGGCGAG TTCATAAAGTTTTAA TERM 684 614339 - 614378 + T 87 -11.7 -2.52681 | overlap 614338 614369 AAGATTAACATCGCA TCGCCATAAGAGTAAAA GCGATA TTTTTCTTTTATGGCGA GTTCATAAAGTTTTA queA 615348 - 614320 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase tatC 616078 - 615341 - | Sec-independent protein translocase TatC tatB 616487 - 616071 - | sec-independent translocase TERM 685 616187 - 616207 + g 73 -5.5 -4.54449 | TATCATCTCTGCTAT CAAAGGT TAAATCT ACCTTTG TTTTATCTAAAATAT CJE0683 617612 - 616545 - | coproporphyrinogen III oxidase TERM 686 616988 - 617009 + g 72 -4.5 -5.00616 | ATTTCATTAAATTAG GAGCATTTT TTTT GAAATGTTC TTTTTTAGCAAAGGC TERM 687 618131 - 618104 - g 100 -11.6 -4.42806 | opp_overlap 618102 TGAGTGTTAAACAAA TTTTTGAAATGA TTAA TCATTTCAAAAA AAATATTTATGTTAA nidH 617713 - 618183 + | dinucleoside polyphosphate hydrolase TERM 688 618779 - 618765 - g 71 -5.8 -4.45577 | opp_overlap 618751 618765, overlap 618751 AGAAATTGGATAAAA TTTCTT ATG AAGAAA TGCTTGAACTTGCAA TERM 689 618855 - 618845 - g 72 -2.6 -5.41143 | opp_overlap 618845 GAGCTTGCAAAAAAA TTAA ATG TTAA CTTAGTAACTAGAAG CJE0685 618185 - 619387 + | aspartate kinase CJE0686 619388 - 619924 + | hypothetical protein CJE0687 619930 - 620529 + | DNA polymerase III subunit delta' TERM 690 620845 - 620862 + G 77 -5.7 -5.00616 | ACTTAAAAATTTGGC TCTTTTT TTGC AAAAAGA TTTTTTAAAACAGAA folP 620531 - 621673 + | dihydropteroate synthase TERM 691 622434 - 622456 + G 70 -8.6 -2.57132 | overlap 622433 622439 ATTTAGACGAAGTTT TAAAAGCTTA TGA TGAGCTTTTA GTTCTAAGAGAAAAA TERM 692 622921 - 622950 + G 72 -4.5 -4.99043 | gap 1, opp_overlap 622927, overlap 622925 622949 TCAAAATATAGATTG TGAA-GATAGACTT GTA AATTCTATCATTCA TTTTGTTTCTAAAAA ligA 621674 - 623617 + | NAD-dependent DNA ligase LigA TERM 693 623972 - 623955 - g 72 -2.7 -5.42862 | opp_overlap 623958, overlap 623958 ATATTTTTAAAAAAA GAATTGC ATTT GCAATTT ATAGATAATGCTTAT TERM 694 624492 - 624474 - g 100 -9 -5.63236 | opp_overlap 624476, overlap 624489 ATTCAAAAAGAAAAA GATCTTTT TGA AAAAGATC TTAAAGATCTTAGAG TERM 695 624501 - 624489 - g 76 -6.3 -4.57073 | opp_overlap 624476, overlap 624474 GATCTTTTTGAAAAA GATCT TAA AGATC TTAGAGAAATTTTTA CJE0690 623598 - 624602 + | hypothetical protein tlyA 624599 - 625360 + | hemolysin A TERM 696 625551 - 625567 + GF 70 -3.8 -5.16472 | opp_overlap 625551 625546 625544 TTTGAAAGTATAAAA TCTTTA GATGG TAAAGA TTTTTTAAGCTTTTT CJE0692 625326 - 626180 + | bifunctional riboflavin kinase/FMN adenylyltransferase CJE0693 626170 - 626877 + | methyltransferase, putative CJE0694 627082 - 626867 - | putative lipoprotein CJE0695 627519 - 627085 - | hypothetical protein TERM 697 627335 - 627351 + g 74 -6.6 -4.31379 | TTACCCTCTTCATTT GTTGGT TTAAC ACCAAC TTTTAATGCATTAAT CJE0696 628209 - 627577 - | hypothetical protein CJE0697 628870 - 628220 - | DNA/RNA non-specific endonuclease nth 629493 - 628867 - | endonuclease III TERM 698 630133 - 630116 - g 72 -4.1 -5.03314 | opp_overlap 630116 TCCAGGTTCAAAAAA CCAAGGT GGTG AGCTTGG TTGGTTTGATCAATC CJE0699 629574 - 630395 + | major antigenic peptide PEB4 fbaA 630395 - 631459 + | fructose-bisphosphate aldolase TERM 699 631451 - 631481 + F 86 -7 -5.08255 | opp_overlap 631456, overlap 631456 TTAAACTGTATAAAC AAAAACTAAGCATT TTA AAAGCTTAGTTTTA TTTTGTTTTAAAAAT TERM 700 631456 - 631476 + F 95 -6.9 -5.40279 | opp_overlap 631456, overlap 631451 CTGTATAAACAAAAA CTAAGCATT TTA AAAGCTTAG TTTTATTTTGTTTTA TERM 701 631476 - 631456 - f 95 -6.9 -5.38054 | opp_overlap 631456 631451 CTGTATAAACAAAAA CTAAGCATT TTA AAAGCTTAG TTTTATTTTGTTTTA CJE0701 631554 - 632996 + | hypothetical protein CJE0702 632993 - 633946 + | chemotaxis protein MotB, putative TERM 702 634126 - 634108 - g 73 -8.9 -3.19389 | overlap 634115 TAAGTTATGGAGGAA GCCAAAG TAATG CTTTGGC GGCATTAAGTATTTT TERM 703 634750 - 634771 + G 81 -10.3 -3.07013 | opp_overlap 634750 634749 TTTATATACATCAAG GTGGAATTT TAGG AAATTCCAC TATGTTAGAGAGATA TERM 704 634771 - 634750 - g 78 -10.3 -2.60797 | opp_overlap 634750, overlap 634749 TTTATATACATCAAG GTGGAATTT TAGG AAATTCCAC TATGTTAGAGAGATA CJE0703 633933 - 634808 + | hypothetical protein CJE0704 636143 - 634800 - | sodium-dependent transporter, putative TERM 705 634840 - 634826 - G 79 -5.8 -5.03994 | TTCCATAGATAAAAA TGATTA AAA TAATCA AAGGTACTATATATT TERM 706 636218 - 636195 - R 75 -9.8 -2.6369 | opp_overlap 636197 636200 636213, overlap 636194 636193 636197 636200 ATAACTTTAAAAACT TATAAGCTAT CCAT ATAGCTTATA TCGTAAGTATTTTTT CJE0705 636862 - 636194 - | MOSC domain-containing protein dsbD 638562 - 636859 - | thiol:disulfide interchange protein DsbD TERM 707 637952 - 637931 - G 83 -3.1 -5.82281 | opp_overlap 637937 AAAGAGAGAAAAAAA CTATATTTT TTTG AAAATTTAG CATTACTTTTTGCTA TERM 708 638289 - 638313 + g 72 -5.1 -4.77036 | opp_overlap 638290 638294, overlap 638290 CAAAGCGCTCTAGTA ATAAATTTGGC AAA GCTAAATTTAA TTTTTGATAATAAAC TERM 709 638290 - 638312 + g 76 -8.6 -3.4574 | opp_overlap 638290 638294, overlap 638289 AAAGCGCTCTAGTAA TAAATTTGGC AAA GCTAAATTTA ATTTTTGATAATAAA TERM 710 639195 - 639182 - g 91 -5.3 -5.88471 | GACGAGCAAAAAAAA CGTTT TGAA AAACG CCGAAGCGATCCACT CJE0707 638657 - 639538 + | hypothetical protein CJE0708 639547 - 640737 + | carboxypeptidase CJE0709 640816 - 641988 + | macrolide-specific efflux protein macA TERM 711 643214 - 643193 - g 80 -2.3 -5.81032 | overlap 643194 TAATGCTAAAAAAAA TCTTTTTCC TGAT GAAAAAAGT GAAAATATTTTAGGT CJE0710 641988 - 643913 + | macrolide-specific efflux protein macB TERM 712 645047 - 645065 + G 73 -9 -3.09492 | AAAGCGACACCTTGC TTTTGCAA AAT TTGCAAAA TATTAACATTAAACA CJE0711 643915 - 645285 + | outer membrane efflux protein CJE0712 646466 - 645288 - | hypothetical protein TERM 713 646304 - 646316 + g 76 -2.7 -5.53991 | CTAATTTTTTTTCTA GATTT TTA AGATC TTTTTTTAATACATA CJE0713 647463 - 646453 - | hypothetical protein TERM 714 647314 - 647328 + g 91 -10 -4.10429 | overlap 647327 TTCTAATTTAATTTT GAAGCC ATT GGCTTC TTTTAAAAGATCATT algI 648840 - 647464 - | alginate O-acetyltransferase AlgI TERM 715 648027 - 648043 + g 70 -3.7 -5.02074 | TGATATGCCATCTAG CCCAAAA ATC TTTTAGG TTTTTTGCAAGATAA ftn 649386 - 648883 - | nonheme iron-containing ferritin TERM 716 649971 - 649957 - g 72 -5 -4.73614 | CATTAGCAAAAGAAA TTCCAC AAA ATGGAA AACTTATACCAAATC CJE0716 649566 - 650561 + | phosphate ABC transporter, periplasmic phosphate-binding protein, putative TERM 717 650617 - 650655 + G 100 -17.8 -4.41895 | overlap 650648 TTTTTTTATGTGCTT TTGTAAGCGTGATAGTAA GTT TTGCTATCATGCTTACAA TTTTAATTGAAGCTT TERM 718 650727 - 650737 + G 76 -6.8 -4.42386 | TCAAGTCAGTGGGCA GCTG ATG CAGC TTTTATGAATGCAGA CJE0717 650571 - 651485 + | phosphate ABC transporter, permease protein PstC, putative TERM 719 651504 - 651491 - g 73 -3.9 -5.19261 | AAATTTATGAAAAAA CTTTT TAAA AAAAG ACAAAAAGCTTCAAA TERM 720 651541 - 651512 - g 72 -2.9 -5.44837 | opp_overlap 651520, overlap 651513 651514 AAAAAAAGACAAAAA GCTTCAAAGTCTT TTAA AAGACTTTGTAAA ATGGGGCTTTATATT TERM 721 651880 - 651895 + G 71 -7.6 -3.41114 | opp_overlap 651866 651865 651879 651878, overlap 651879 TGGAGACTCAAAATC TCCTGA AAAT TCAGGA ATTTTATCTTCAGTT TERM 722 652388 - 652414 + G 73 -8.8 -3.12395 | overlap 652387 TTTATCCCTGATGTA GCTAGTTCGATT TTT GATCCAACTAGC GTTTTACCTGCTCAA CJE0718 651482 - 652570 + | phosphate ABC transporter, permease protein PstA, putative pstB 652567 - 653307 + | phosphate ABC transporter, ATP-binding protein CJE0721 654701 - 654603 - | hypothetical protein TERM 723 655593 - 655618 + GH 85 -8.5 -4.371 | gap 1, opp_overlap 655586 655599, overlap 655598 655599 TATGAAAATATAGCT TATAAA-CACGC TTG GCGTGCTTTATA TTTTAGTGTAATAGC TERM 724 655598 - 655612 + GH 71 -5.6 -4.49352 | opp_overlap 655599, overlap 655593 655599 AAATATAGCTTATAA ACACGC TTG GCGTGC TTTATATTTTAGTGT TERM 725 655611 - 655599 - gH 86 -9.1 -3.9226 | opp_overlap 655598 655593 655599 AATATAGCTTATAAA CACGC TTG GCGTG CTTTATATTTTAGTG TERM 726 655599 - 655611 + GH 78 -9.1 -3.27985 | opp_overlap 655599, overlap 655598 655593 AATATAGCTTATAAA CACGC TTG GCGTG CTTTATATTTTAGTG CJE0722 654687 - 656003 + | MATE efflux family protein CJE0723 655964 - 656626 + | hypothetical protein CJE0724 656668 - 658188 + | hypothetical protein TERM 727 658247 - 658262 + G 83 -7.6 -4.57569 | opp_overlap 658247 658257 TTAGTTTATGAACTA GCTTTG AAAT CAAAGC TTTTTGGAGAAGTAA TERM 728 658530 - 658508 - g 72 -4.3 -5.07053 | AAGGAGTGTAAAAAA GAATTTTTT GATGA AAAAAATCC ACGCTTTTTATATCC TERM 729 659194 - 659217 + G 100 -9.8 -5.33026 | TGAGTTTAATTTGCG TCAAAAACTT GATA AAGTTTTTGA TTTTTATTTGGATTA hypF 658169 - 660358 + | [NiFe] hydrogenase maturation protein HypF hypB 660435 - 661178 + | hydrogenase accessory protein HypB hypC 661178 - 661459 + | hydrogenase assembly chaperone HypC/HupF TERM 730 661509 - 661497 - g 72 -2.7 -5.42259 | TTAGCTTTAAAAAAA CTTAT AGA ACAAG AACTTAAAAATCCTA TERM 731 661621 - 661632 + G 70 -5.8 -4.27117 | overlap 661618 ACTTTATCCATGGGC CAGG ATGT CCTG TTTGTGTTATGCCAA hypD 661443 - 662534 + | hydrogenase expression/formation protein HypD TERM 732 663255 - 663240 - g 74 -3.3 -5.4505 | overlap 663214 TCTTTGAAGAAAAAA TCATC GTTCAA GATGA GGTTTTAGGACTTTG hypE 662531 - 663505 + | hydrogenase expression/formation protein HypE TERM 733 663834 - 663803 - g 82 -7.4 -4.76963 | opp_overlap 663803 GTATAGAATACAAAA TCACACAAGGTG AGGACTTG CACCTTATGCGA CTTGTGATGGAGTGA hypA 663505 - 663849 + | hydrogenase nickel insertion protein HypA TERM 734 663930 - 663914 - f 74 -5.3 -4.81814 | opp_overlap 663914 663920 AGTATTATAATAAAA TAAAATT TTT AATTTTA CAAGGATTAAAATAT CJE0731 663944 - 665971 + | type III restriction/modification enzyme, methylase subunit CJE0732 665952 - 668513 + | type III restriction-modification enzyme CJE0733 669509 - 668544 - | DNA polymerase III subunit delta TERM 735 668601 - 668630 + g 100 -13.1 -3.36823 | CAAAAATTCTTTTTT TACGAGCTTAGAA TTGG TTTTAAGCTCGTA TTCGCTTTTAAGCAA TERM 736 669346 - 669331 - G 88 -7.6 -5.00616 | opp_overlap 669330 CCTGCGCTTAAAAAA TCACTC GCAC GAGTGA AGTTGTATTCTTCAA CJE0734 671436 - 669502 - | RNB-like protein TERM 737 672527 - 672507 - g 86 -6.1 -5.36441 | opp_overlap 672509 672512, overlap 672509 672512 CTTTGATAGAAAAAA CAGGACGCA ATT TGCGTGCTA TGATGCCTTGGATCA TERM 738 672525 - 672509 - g 72 -6.5 -4.31943 | opp_overlap 672509 672512, overlap 672507 672512 TTGATAGAAAAAACA GGACGCA ATT TGCGTGC TATGATGCCTTGGAT ilvC 671555 - 672577 + | ketol-acid reductoisomerase TERM 739 672658 - 672692 + G 71 -8.8 -2.88802 | overlap 672657 672654 TTGCATAGCTTTAGC TTTGGGAATTTTAGTA AAA TATCAAAATTCCCAAG ATGTTTCTTCTGTTA CJE0736 672581 - 673663 + | hypothetical protein dprA 673653 - 674426 + | DNA processing protein A CJE0738 674423 - 674806 + | Holliday junction resolvase-like protein TERM 740 674953 - 674943 - g 72 -2.6 -5.45802 | TTTTTAAAACAAAAA TTAA AAT TTAA AAAGATCAATGCTTA CJE0739 674835 - 675674 + | NOL1/NOP2/sun family protein TERM 741 675812 - 675791 - T 90 -7.3 -5.08255 | ACTTTGAAAAGAAAA TCACAGCGT GAAA AGGCTGTGA ATAAAGTTGAATTTT msrA 676347 - 675850 - | methionine sulfoxide reductase A TERM 742 676354 - 676398 + r 77 -5.1 -4.97312 | overlap 676361 ATTTTTCATTGCGAG TTTTCCTTAATCTTAGCCCTT TGA AAGGGCTAAGATTATTTATAG TTTTTGATTGCTTTT TERM 743 676361 - 676391 + r 100 -18.6 -4.27774 | overlap 676354 ATTGCGAGTTTTCCT TAATCTTAGCCCTT TGA AAGGGCTAAGATTA TTTATAGTTTTTGAT ppa 676907 - 676389 - | inorganic pyrophosphatase TERM 744 676785 - 676766 - G 77 -8.6 -3.63744 | overlap 676764 TTGCTGGGTAAAACA TCGCGCTA GCCA TAACGCGA TCTACCATAATAGCA adk 677495 - 676917 - | adenylate kinase aspS 679243 - 677492 - | aspartyl-tRNA synthetase TERM 745 678383 - 678365 - G 79 -7.6 -4.3078 | AATCACATCAATAAA TTTAAGAT TAA ATCTTAAA TCCGGCTTATCAGAG TERM 746 678727 - 678699 - G 76 -9.6 -2.64616 | opp_overlap 678694 678691, overlap 678702 678703 CCCTGATGCACACGA GAAGGCACGAGA TAATC TCTTGCGCCTTC GGGAGTAGCTTTGGT TERM 747 679661 - 679680 + G 78 -4.4 -5.40072 | gap 1, opp_overlap 679661 679662 TTTAAAGTTGATGAA GC-TGAAAA TTT TTTTCAAGC TTTTTTTCAAGGAGA CJE0744 679334 - 680194 + | ATP-NAD kinase, putative TERM 748 681145 - 681127 - g 80 -6.1 -4.96028 | overlap 681139 TTTGAAAAAAAAGAA CTTGAAA AAAAA TTTCAAG AATTAAAACAAAAAT TERM 749 681153 - 681139 - g 80 -2.2 -5.81032 | overlap 681127 GAACTTGAAAAAAAA TTTCAA GAA TTAAAA CAAAAATTAGAAGAA TERM 750 681297 - 681285 - g 72 -4.9 -4.87803 | opp_overlap 681285 GACGCTTAAAGAAAA TGAAA AAA TTTCA ATTTTAGGCAAAGAT recN 680194 - 681717 + | DNA repair protein RecN CJE0746 681823 - 683067 + | response regulator/GGDEF domain-containing protein CJE0747 683058 - 683873 + | TatD family hydrolase TERM 751 684860 - 684850 - gf 72 -2.6 -5.36314 | TAAAATAGCAAAAAA TTAT AAT ATAA GTGTTGATGAAATTC CJE0748 683873 - 684991 + | membrane-bound lytic murein transglycosylase D, putative rlpA 684951 - 685778 + | rare lipoprotein A TERM 752 686250 - 686236 - g 81 -2.8 -5.67063 | TTTAGTAGAAAAAAA TCATCT AGA AGAAGA ATGGAATAAGCTTTG CJE0750 685784 - 686272 + | YrbI family phosphatase CJE0751 686344 - 686778 + | hypothetical protein CJE0752 686760 - 687221 + | OstA family protein CJE0753 687218 - 687814 + | GTPase EngB CJE0754 687811 - 688305 + | hypothetical protein TERM 753 689673 - 689687 + G 70 -4.2 -5.00884 | overlap 689674 AATCGCAAAAGGTGG AGAGGT TAT ACCTCA TTTTTTAAAAAGCAT TERM 754 689674 - 689686 + G 72 -7.7 -3.60048 | overlap 689673 ATCGCAAAAGGTGGA GAGGT TAT ACCTC ATTTTTTAAAAAGCA pbpC 688312 - 690111 + | penicillin-binding protein 2 TERM 755 690130 - 690145 + T 74 -4.8 -5.055 | opp_overlap 690126 690130 TTAGTTGTAAATTGA GTTTTT CAAA AAAAAC TTTTTTAGCAATTGG TERM 756 690203 - 690169 - T 73 -6 -4.58283 | opp_overlap 690159 CAATTGGTTTAAAAA CCTTGTATTAAA TAAATTATAAG TTTAATACAAGG AAAATTTATCTATAT CJE0756 692022 - 690232 - | M24 family peptidase TERM 757 690885 - 690864 - G 73 -5.9 -4.58644 | AATCAATAAGTAAAA GCCCATCTT TTTT AAGATAAGC AAAACTCTCTTTTGT CJE0757 693591 - 692038 - | di-/tripeptide transporter TERM 758 693847 - 693836 - R 75 -4.4 -5.18726 | opp_overlap 693836 GTGCTACAACAAAAA GCAT CCAC ATGC ATTGTCTAAAAATAT TERM 759 694408 - 694390 - R 74 -4.7 -5.00196 | opp_overlap 694390 694387 CTGCAAAGAATAAAA CAATTAA AATTA TTAATTG TTGTTTCTCTCTTTT CJE0759 694746 - 694507 - | hypothetical protein TERM 760 694790 - 694774 - R 72 -8 -3.4033 | opp_overlap 694773 AAACCACATATAAGA GGAGCA ATGAA TGCTCC AATGTTAATTCCTAT TERM 761 695387 - 695349 - R 74 -7.9 -3.65638 | opp_overlap 695344 695349 695351 695370, overlap 695343 695362 ATAATTAAATTACAA TATTTTTAAATATTTTT TTTAT AATAATATTTAAAAATA TAATATTTTAATATT CJE0761 695952 - 695404 - | hypothetical protein TERM 762 696303 - 696317 + r 70 -2.2 -5.49568 | overlap 696313 AGTTTAGAAATTTCT TTTTGT ATG ATAAAA TTTTTATTTTGAATT CJE0762 697051 - 696341 - | hypothetical protein TERM 763 696675 - 696687 + g 72 -2.7 -5.47399 | overlap 696684 TCCATATTACCTGGG TTGAA ATT TTCGA TTTTTTTAAGATTGA era 697913 - 697038 - | GTP-binding protein Era TERM 764 697795 - 697806 + g 85 -7.2 -4.99043 | ATGGCTTTGATTTTA CGCC TTGT GGCG TTTTGTTTGTGAGAA hslU 699229 - 697910 - | ATP-dependent protease ATP-binding subunit hslV 699768 - 699226 - | ATP-dependent protease peptidase subunit rplI 700211 - 699768 - | 50S ribosomal protein L9 argG 701444 - 700224 - | argininosuccinate synthase TERM 765 700909 - 700919 + g 74 -3.2 -5.45652 | overlap 700897 GCGTCCATAGAATAA GGAG ATT TTCC TTTTTTCTTAGAAAT TERM 766 701554 - 701576 + H 77 -2 -5.86061 | opp_overlap 701559, overlap 701555 AAAGCAAAGGCGTAA GCAAATTTTG TTC CAAAAATTGA TTTTTTTTGCTAAAA CJE0768 701600 - 701845 + | S4 domain-containing protein TERM 767 701963 - 701945 - g 85 -8.2 -4.62069 | opp_overlap 701948 TGGCTAGCGGAAAAA CAAGCTTA GTG CAAGCTTG GGTTAAATTTCTTGG CJE0769 701842 - 702249 + | hypothetical protein CJE0770 702233 - 702970 + | ABC transporter, ATP-binding protein rpoN 702970 - 704220 + | RNA polymerase factor sigma-54 dcuB 704384 - 705808 + | anaerobic C4-dicarboxylate transporter TERM 768 705814 - 705837 + F 83 -9 -3.95911 | opp_overlap 705813 705814 TTATCTTTAAAAATT TTTAGTAGGA TTTT TCCTGCTAAA TTCTTCATTTGTCTT CJE0773 705950 - 706063 + | hypothetical protein TERM 769 708089 - 708111 + F 79 -10 -3.01712 | opp_overlap 708085, overlap 708086 TTATTTATAATCTTG CTTTTTGCAA ATT TTGCAGAAAG TATTGCAGAAGGAAG CJE0776 709917 - 710525 + | potassium-transporting ATPase, C subunit, putative uvrB 714300 - 712327 - | excinuclease ABC subunit B TERM 770 712396 - 712406 + g 74 -5.4 -4.88795 | CTCAAGTGCTTTAGC TGCT TCA AGCA TTTGTTTTCTTAACT CJE0779 714454 - 714684 + | hypothetical protein CJE0780 714674 - 714916 + | hypothetical protein CJE0781 714913 - 715350 + | hypothetical protein TERM 771 715594 - 715608 + G 81 -7.2 -4.57275 | TTTATTATTATGCTT CAAAAC TTG GTTTTG TTTTGGGTTTTTTTG TERM 772 716958 - 716904 - g 70 -4.4 -4.94487 | TTAGAAAATAGAAAA GATCTTTACCCCCCATTTAAACGCCT TTT AAGAGTTCTTATAGAAGATAAAGATC AAAAAAGTGCACAAA priA 715332 - 717185 + | primosome assembly protein PriA CJE0783 718592 - 717195 - | invasion phenotype protein ispG 718738 - 719811 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 773 719846 - 719814 - T 100 -12.9 -5.093 | opp_overlap 719822, overlap 719815 719816 TGTAAAAGAATAAAA GCCTAAAAGCAAGGT TTA ACCTTGCTTTTAGAA TGGCCATATCGCTTC TERM 774 719845 - 719815 - T 100 -16.4 -3.63953 | opp_overlap 719822, overlap 719814 719816 GTAAAAGAATAAAAG CCTAAAAGCAAGGT TTA ACCTTGCTTTTAGA ATGGCCATATCGCTT TERM 775 719844 - 719816 - T 100 -17.7 -2.76745 | opp_overlap 719822, overlap 719815 719814 TAAAAGAATAAAAGC CTAAAAGCAAGGT TTA ACCTTGCTTTTAG AATGGCCATATCGCT TERM 776 719822 - 719838 + T 93 -10.9 -4.13945 | opp_overlap 719816 719815 719814 AATAAAAGCCTAAAA GCAAGGT TTA ACCTTGC TTTTAGAATGGCCAT flgH 720539 - 719841 - | flagellar basal body L-ring protein TERM 777 721631 - 721643 + G 74 -6.3 -4.44277 | ATTTTCTTTATGGGG CTTGA AGA TCAAG TTTTAGCTTTTGCTG TERM 778 722010 - 721994 - g 95 -10.9 -3.87641 | opp_overlap 721991 721990 721989, overlap 722007 722008 AATATTTGTTACAAA GCAGTTC AAA GAACTGC TAATGCTTTAGCAAT pta 720629 - 722134 + | phosphate acetyltransferase ackA 722148 - 723338 + | acetate kinase TERM 779 723349 - 723373 + T 81 -7.4 -4.58283 | opp_overlap 723349 ATTAAATTTTAAAAA CTATATAAAT CTTTC ATTTATATAG TTTTTAGCAAGGTTG TERM 780 723373 - 723349 - T 81 -7.4 -4.71482 | opp_overlap 723349 ATTAAATTTTAAAAA CTATATAAAT CTTTC ATTTATATAG TTTTTAGCAAGGTTG CJE0789 727118 - 723366 - | hypothetical protein TERM 781 723565 - 723579 + g 86 -7.2 -5.01535 | opp_overlap 723577, overlap 723574 AATTCTTGTTTTAGC TCATCA AAA TGATGA TTTTTATCATTGTAA TERM 782 724777 - 724798 + g 78 -6.7 -4.66537 | gap 1 TCTTTTTTCTTGCTA GCGATTA-AG CTT CTATAATCGC TTTTATATTGCGGAA CJE0790 727268 - 727759 + | hypothetical protein CJE0791 728685 - 727747 - | hypothetical protein TERM 783 728336 - 728357 + g 88 -3.1 -6.14618 | opp_overlap 728341, overlap 728341 TTTGCTTTTTTTCTG CTAAATAAA AAAT TTTTTTTAG TTTTTTTATTTTCTC TERM 784 728411 - 728422 + g 70 -4.4 -4.86902 | GAAAAAATTTTTTTA GCAA GAGA TTGC TTTTCTTCTAATTTA mraW 729617 - 728685 - | S-adenosyl-methyltransferase MraW CJE0793 729782 - 731272 + | peptidyl-prolyl cis-trans isomerase D,-like protein TERM 785 732623 - 732601 - g 72 -6.4 -4.323 | TTTAAAGAGCCAAAA GAAAAAAAAC CTA GTGTTTTTTC AAATATCTGGCATAA ftsA 731275 - 732657 + | cell division protein FtsA ftsZ 732673 - 733785 + | cell division protein FtsZ TERM 786 733821 - 733800 - f 70 -7.4 -3.58536 | opp_overlap 733800 AAATTGATTTTTAAA GCAAGATT GAGTCA AATCTTGC TTTTTATAGTTTAAA TERM 787 733800 - 733821 + F 90 -7.4 -5.04325 | opp_overlap 733800 AAATTGATTTTTAAA GCAAGATT GAGTCA AATCTTGC TTTTTATAGTTTAAA CJE0796 733941 - 734753 + | flagellar basal-body rod protein flgG 734782 - 735573 + | flagellar basal body rod protein FlgG TERM 788 735609 - 735635 + T 100 -12.5 -4.57073 | TTTAATTCTTTTTTG TTTAATGGCGT GTTAA ACGCCATTAAA TTTTTAGCAAGAGTA glnA 737069 - 735639 - | glutamine synthetase, type I CJE0799 737280 - 737158 - | hypothetical protein CJE0800 737272 - 737967 + | hypothetical protein TERM 789 739127 - 739107 - g 79 -5.5 -5.08169 | opp_overlap 739094 ATAGAGTTTAAAAAA CTCATTGCT AAA AACAATAAG GAATTTAGCGAAATT CJE0801 737964 - 739217 + | U32 family peptidase purE 739218 - 739712 + | phosphoribosylaminoimidazole carboxylase catalytic subunit glyQ 740270 - 741133 + | glycyl-tRNA synthetase subunit alpha TERM 790 741453 - 741475 + G 75 -7.2 -4.08064 | opp_overlap 741453, overlap 741457 ACTTATTTTACGGAA GAAATTTTAG GTT TTAAAATTTC TTTTAAAGACGAATT TERM 791 741570 - 741551 - g 80 -2.2 -5.75342 | CTGGGTGAAAAAAAA GTTAAATT TGCA AATTTTAC GTGTAAGTGATTGTG CJE0805 741120 - 741845 + | hypothetical protein CJE0806 741855 - 742571 + | hypothetical protein TERM 792 743009 - 743020 + G 83 -3 -5.69976 | GATAAATCTTATCAT TCTT ATCA AAGA TTTTCTTTTTTTTAT TERM 793 743026 - 743042 + G 86 -5.3 -5.64304 | TTATCAAAGATTTTC TTTTTTT TAT AAAAAAA TTTTTTCTTATATTG waaA 742568 - 743725 + | 3-deoxy-D-manno-octulosonic-acid transferase TERM 794 743893 - 743873 - g 72 -4.8 -4.89729 | GATAAAAGCTAAAAA TCCTCAAA TTATT TTTGAAGA TGATAAGATTATTGC CJE0808 743706 - 744458 + | RNA pseudouridylate synthase family protein TERM 795 744641 - 744628 - g 74 -3.1 -5.49809 | overlap 744618 GAAACCTTAAAAAAA GCTCT TTTA AAAGC AGATGTTCACCATAA ffh 744526 - 745863 + | signal recognition particle protein TERM 796 745911 - 745858 - f 76 -8 -3.77639 | opp_overlap 745865, overlap 745865 745900 CAAGCTAGAAGACAA TTTTAAATTTTATTTATAAATACT TTTTAT AGTATCTATAAATAAAATTTTTAA TTTTTTAAGGAGTAT TERM 797 745865 - 745904 + F 100 -8.3 -5.25735 | opp_overlap 745858 745865 745900 GAAGACAATTTTAAA TTTTATTTATAAATACT TTTTAT AGTATCTATAAATAAAA TTTTTAATTTTTTAA TERM 798 745904 - 745865 - f 89 -10.5 -3.71883 | opp_overlap 745865, overlap 745858 745900 GAAGACAATTTTAAA TTTTATTTATAAATACT TTTTAT AGTATCTATAAATAAAA TTTTTAATTTTTTAA rpsP 745929 - 746156 + | 30S ribosomal protein S16 CJE0811 746159 - 746401 + | hypothetical protein rimM 746394 - 746933 + | 16S rRNA processing protein RimM TERM 799 747597 - 747585 - g 70 -6.3 -4.07568 | TGGCGTCTTGCAAAA CGAAA TTT TTTCG TCCAGATTTATTTTT trmD 746930 - 747634 + | tRNA (guanine-N(1)-)-methyltransferase rplS 747645 - 748001 + | 50S ribosomal protein L19 TERM 800 748011 - 747999 - f 70 -3.5 -5.10077 | opp_overlap 747992 747999 AAAGAGCTTAAAAAA TAATT TAT AATTA TTTTCTATTATAAGT TERM 801 748129 - 748092 - f 80 -9.6 -3.46813 | gap 1, overlap 748090 TAATTATTAATAATA CT-CTTGTATAATATTT CTTGT AAATATTATACAAGGAG AGAAAATGTTTTCTA CJE0815 748135 - 748548 + | transthyretin-like protein TERM 802 749622 - 749608 - g 72 -8.6 -2.96984 | TAAATTTAGTATATA GCATAG ATC CTATGC ATGGAAATACGGTAA CJE0816 748572 - 749912 + | 3-deoxy-7-phosphoheptulonate synthase TERM 803 750057 - 750047 - g 78 -4 -5.45802 | overlap 750041 TGGTTAAAACAAAAA TCTT TTG AAGA ACTTATCAATACTGC CJE0817 749909 - 750238 + | hypothetical protein TERM 804 750239 - 750260 + F 100 -7.4 -5.5604 | opp_overlap 750241 750243 GAGAAAATGTTATGA TAGAGTGT TTGATT ACACTCTA TTTTTTATTAATTGA TERM 805 750430 - 750444 + F 70 -8.6 -2.5805 | overlap 750419 750429 CGCTTTGTAGTTCTT CTGCAA TCC TTGCAG CTTATGGGCGATAAT TERM 806 753977 - 753965 - g 70 -6.3 -4.07675 | overlap 753960 TTAAAAGCAATTAAA GACTT GCA AAGTC TTGAAGATGGTGAGA TERM 807 754020 - 754010 - g 88 -4 -5.68039 | AAAGCTATAAAAAAA TTTG GCA CAAA AAAAGATTTTAAAAA dnaE 750686 - 754288 + | DNA polymerase III subunit alpha TERM 808 754283 - 754309 + T 73 -6 -4.66609 | opp_overlap 754282 754283, overlap 754284 754298 ATTTCTAATAAATAT GCTTAAGTAAGA TTG TTTTACTTAAGA TTTTTAAATAAAATG TERM 809 754284 - 754308 + T 80 -9.5 -3.39483 | opp_overlap 754282 754283, overlap 754283 754298 TTTCTAATAAATATG CTTAAGTAAGA TTG TTTTACTTAAG ATTTTTAAATAAAAT CJE0819 754932 - 754300 - | hypothetical protein TERM 810 754940 - 754969 + r 86 -10.9 -3.44319 | opp_overlap 754945, overlap 754945 AAAGTCATTTTGATA AAAAATAAGCCCT AAAT AGGGCTTATTTTA TTGTAATAAATTAGC TERM 811 754945 - 754964 + r 100 -10.8 -4.81212 | opp_overlap 754945, overlap 754940 CATTTTGATAAAAAA TAAGCCCT AAAT AGGGCTTA TTTTATTGTAATAAA TERM 812 754964 - 754945 - R 100 -10.8 -5.252 | opp_overlap 754940 754945 CATTTTGATAAAAAA TAAGCCCT AAAT AGGGCTTA TTTTATTGTAATAAA flaC 755716 - 754967 - | flagellin subunit protein FlaC CJE0821 756225 - 755755 - | hypothetical protein TERM 813 755809 - 755796 - G 83 -2.4 -5.90231 | AGAAATATAAAAAAA CTTG CATTAT CAAG ATGATTTTAATCACC TERM 814 756161 - 756147 - G 95 -7.2 -5.86061 | opp_overlap 756146 756147 TTTGAGGAAAAAAAA TTGTTG GCG CAACAA CTATTCCTAGTATGA CJE0822 757053 - 756238 - | HemK family modification methylase CJE0823 758237 - 757050 - | M48 family peptidase TERM 815 757805 - 757793 - G 70 -6.3 -4.18351 | AAAGCAAAGCATAAA GGATT AAA AATCC AAATATTAAAGTTAA CJE0824 758364 - 758549 + | hypothetical protein mogA 759088 - 758546 - | molybdenum cofactor biosynthesis protein TERM 816 758828 - 758816 - G 74 -9.1 -2.80113 | opp_overlap 758815 758814 CATCATTTTATCACA CACGG CTT CCGTG GCTTCTGGGGTTACA TERM 817 758961 - 758975 + g 72 -2.9 -5.4251 | overlap 758957 GGGATTAATTCTTTA TGATA AATAA TATCA TTTTTTATATATGAA corA 760092 - 759109 - | magnesium and cobalt transport protein CorA TERM 818 759743 - 759763 + g 73 -5.6 -4.59773 | GTGCTAAATTCGTTA TATCTTAT AGTAA ATAAGATA TTTTTAGCGGTAGCA CJE0827 760209 - 761255 + | ABC transporter, periplasmic substrate-binding protein TERM 819 761385 - 761399 + G 72 -2.8 -5.43866 | opp_overlap 761380 TACAGTAAAACCTCC TAAGGA TGC TCCTGA TTTTTTTAAAACTTA TERM 820 762552 - 762572 + G 72 -4.1 -5.02074 | opp_overlap 762554, overlap 762554 TGATGATAATGAATT TATTTTACT TGA AGTAAAAGA TTTTTTAAAGAGTAA CJE0828 761266 - 762591 + | hypothetical protein TERM 821 762754 - 762768 + G 75 -7.1 -4.1899 | opp_overlap 762754 ACGAGTGCTTATTAA CAGGC GTAAA GCCTG TTTTAAGTGAGATAA CJE0829 762591 - 763397 + | hypothetical protein CJE0830 763394 - 764233 + | ABC transporter, permease protein CJE0831 764234 - 765013 + | ABC transporter, permease protein TERM 822 765136 - 765148 + G 72 -7.7 -3.6878 | TGGGCCCAAGTGGCT GTGGA AAA TCCAC TCTTTTAAGGTGTAT CJE0832 765054 - 766007 + | ABC transporter, ATP-binding protein TERM 823 766138 - 766119 - g 75 -4.4 -5.30686 | overlap 766121 766136 AATATTTAGAAAAAA TCGTTTTT TATC AAAAACAA TATCAAGAAAAAAAG TERM 824 766318 - 766333 + G 88 -7.6 -4.8622 | opp_overlap 766318 766317 AAGGTGTATTATAAT TTCAGC TACG GCTGAA TTTTTAGTTAGAAAA CJE0833 766004 - 766642 + | HAD family hydrolase TERM 825 766647 - 766668 + T 91 -11.7 -3.57161 | opp_overlap 766647 766650, overlap 766650 TAACTTTTTAAGCTA TAAGCGTGA AAAT TCACGCTTA TTCTAATTCATATTT TERM 826 766668 - 766647 - T 87 -11.7 -2.53213 | opp_overlap 766647 766650, overlap 766650 TAACTTTTTAAGCTA TAAGCGTGA AAAT TCACGCTTA TTCTAATTCATATTT TERM 827 766665 - 766650 - T 77 -9 -3.41878 | opp_overlap 766647 766650, overlap 766647 CTTTTTAAGCTATAA GCGTGA AAAT TCACGC TTATTCTAATTCATA TERM 828 766650 - 766665 + T 83 -9 -3.90241 | opp_overlap 766650 766647, overlap 766647 CTTTTTAAGCTATAA GCGTGA AAAT TCACGC TTATTCTAATTCATA cjaC 767421 - 766666 - | CjaC TERM 829 767664 - 767642 - H 77 -5.8 -4.77986 | opp_overlap 767634 767642 TTAAATATTGAAAAA TAAAATATCA AAT TAATATTTTA TTTTATAATTAACTC CJE0835 767754 - 768371 + | hypothetical protein TERM 830 768890 - 768876 - f 70 -7.2 -3.62597 | TTTATGGTGGAAGAA CATTAC AGG GTAATG CAGAGAAAAATTCTA TERM 831 769081 - 769053 - f 85 -10.6 -3.24823 | opp_overlap 769052 769051, overlap 769050 769051 769040 AACCTTTAAAAATCA GTGATAATTTTT ATGGA AAAAATTATCAC AATCTTTACGGAGGT TERM 832 769669 - 769698 + F 84 -10.3 -3.55866 | gap 1, opp_overlap 769673, overlap 769673 TAGCTGGAGTGTCTG CAAATTCTCATGAT AAT ATCATG-GAATTTG TTAATTTAAATATAG CJE0837 770335 - 770754 + | hemagglutination domain-containing protein CJE0838 771027 - 771983 + | hypothetical protein CJE0839 772064 - 772414 + | hypothetical protein CJE0840 772510 - 772968 + | hypothetical protein TERM 833 773151 - 773131 - f 83 -4.7 -5.59502 | TAAAAAATCAAAAAA GCCCTGTAA ATT TTAAAGAGC AAAATACTACAAATA CJE0841 773449 - 773691 + | hypothetical protein CJE0842 773943 - 774164 + | hypothetical protein TERM 834 774306 - 774316 + F 74 -6.8 -4.21908 | opp_overlap 774305 TTATCAAAAAGTTAT CAGC GAT GCTG TTTTAGATAGTAGTG CJE0843 774415 - 774669 + | hypothetical protein TERM 835 775103 - 775125 + T 79 -7.9 -3.85891 | opp_overlap 775103 TCTAATAATTAAAAA GATTAAAAG TTTTT CTTTTAATC TTTCATAACTTTTTC TERM 836 775125 - 775103 - T 95 -7.9 -4.99435 | opp_overlap 775103 TCTAATAATTAAAAA GATTAAAAG TTTTT CTTTTAATC TTTCATAACTTTTTC TERM 837 775153 - 775134 - T 72 -8 -3.31322 | TTTAATCTTTCATAA CTTTTTCT TTGA AGAAAAAG ATTAAACTATCTATA TERM 838 775189 - 775153 - T 77 -5.3 -5.06414 | opp_overlap 775160 TTCTTTGAAGAAAAA GATTAAACTATCTATAA TTT TTATGGAGAGTTTGATC CTGGCTCAGAGTGAA TERM 839 775246 - 775263 + T 70 -8.5 -2.56596 | opp_overlap 775245 775246 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 840 775263 - 775246 - T 70 -8.5 -2.56343 | opp_overlap 775246, overlap 775245 AGTCGAACGATGAAG CTTCTAG CTTG CTAGAAG TGGATTAGTGGCGCA TERM 841 776651 - 776668 + T 74 -9.1 -3.07291 | opp_overlap 776651 GTCGTAACAAGGTAA CCGTAGG AGAA CCTGCGG TTGGATCACCTCCTT TERM 842 777136 - 777158 + T 82 -7.8 -4.35682 | overlap 777138 TTAATATATATACTT CCTTTAGGTT TTA AACCTAAATG TTCTTTTAATTATCA TERM 843 777138 - 777156 + T 81 -9 -3.76665 | overlap 777136 AATATATATACTTCC TTTAGGTT TTA AACCTAAA TGTTCTTTTAATTAT TERM 844 777754 - 777737 - T 91 -11.3 -3.66803 | opp_overlap 777736 777735, overlap 777730 GCGCAAGAGGGCAAA CCCAGTG CTTG CACTGGG GGTTGTAGGACTGCA TERM 845 780552 - 780562 + T 70 -5.4 -4.57341 | AATAAAGCATCACTT CCTT GTT AAGG TTTTTAAGAAGACTT TERM 846 781365 - 781345 - T 90 -8.3 -4.67982 | opp_overlap 781344 TTTTATTCAATAAAA CTCTCACTT CTT AAGTGGGAG ATGAATTGCTTACAG TERM 847 782903 - 782913 + T 77 -5.4 -4.96848 | opp_overlap 782901 TTAGCTTAATTTATA TACC AAT GGTA TTTTTATATGAAAAG tonB 783571 - 782888 - | TonB TERM 848 782920 - 782938 + g 71 -7.6 -3.38191 | overlap 782931 CCAATGGTATTTTTA TATGAAAA GTT TTTTCATA TTGTGGAAATTTTTT TERM 849 783491 - 783477 - G 79 -5.8 -5.03314 | TGTATGTGTAAAAAA TCTTTA GAA TAAAGA AAAACAAAAAATAAA CJE0846 783641 - 783787 + | hypothetical protein TERM 850 785719 - 785705 - g 72 -5 -4.77165 | overlap 785709 GCTTCTATAATAAAA TTACCC CTT GGATAA AAGGCGAATGGCAAA cfrA 783895 - 785985 + | ferric receptor CfrA TERM 851 786001 - 786027 + F 100 -6.7 -5.72622 | gap 1, opp_overlap 786001 GCTTTGATAGAAAAG CCAAAG-AGCTT GTAA AGGCTTCTTTGG TTTTTTGTTTATAGC TERM 852 786277 - 786242 - f 77 -9.2 -3.31322 | CTCAATGTTGTATAA TATATCTAGCAATCAA AAAA TAGAGTGCTAGATATA AAGGAAAACATGATG TERM 853 786858 - 786898 + G 100 -16.5 -3.24017 | opp_overlap 786858 786881, overlap 786853 786870 786880 GAAGCAATGAAGAAA GAGCTTATCAAATTTATCA AAA TGATGAATTTGTTAAGCTC TTAGATTGTCAAATT TERM 854 786898 - 786858 - g 100 -14.3 -4.36343 | opp_overlap 786858 786853 786870 786880, overlap 786881 GAAGCAATGAAGAAA GAGCTTATCAAATTTATCA AAA TGATGAATTTGTTAAGCTC TTAGATTGTCAAATT hrcA 786287 - 787081 + | heat-inducible transcription repressor grpE 787078 - 787605 + | co-chaperone protein GrpE TERM 855 787905 - 787864 - g 71 -7.6 -3.43151 | overlap 787876 TTAATGATCAATGAA GATGCGGCTAAAGAAG-CTA AAAA TAGACTTCCTTA-CCACATC ACCGAAAGAAATGGT TERM 856 787989 - 787967 - g 72 -6.4 -4.32579 | ACACCCCACAAGAAA TTTCAGCAAA AGT TTTGATGAAA TTAAAAGAAGATGCA TERM 857 789480 - 789466 - g 85 -2.8 -5.98675 | overlap 789469 789471 GATAAAAAGAAAAAA GATGAC GAT GTAATC GACGCTGAAGTTGAG dnaK 787627 - 789498 + | chaperone protein DnaK TERM 858 789511 - 789539 + F 100 -11.9 -5.15117 | opp_overlap 789499 789518, overlap 789513 TAATCTTAAAATCTC TATTCAAGCCTTT TTA AAAGGCTTGAAAA TTTTTTAAAATTTTA TERM 859 789513 - 789537 + F 100 -14.5 -2.78839 | opp_overlap 789499 789518, overlap 789511 ATCTTAAAATCTCTA TTCAAGCCTTT TTA AAAGGCTTGAA AATTTTTTAAAATTT TERM 860 789532 - 789518 - f 71 -8.6 -3.07575 | opp_overlap 789513 789511, overlap 789499 AAAATCTCTATTCAA GCCTTT TTA AAAGGC TTGAAAATTTTTTAA TERM 861 789737 - 789702 - f 79 -6.6 -4.76123 | gap 1, opp_overlap 789707 789711, overlap 789707 789711 AAATTAGCAATAAAA TAAAATTA-ATCTAAAA ACT TTTTAGATATAATCTTA ATAAACATAAAAGGA TERM 862 789732 - 789707 - f 78 -4.3 -5.28831 | gap 1, opp_overlap 789707 789711, overlap 789702 789711 AGCAATAAAATAAAA TTA-ATCTAAAA ACT TTTTAGATATAA TCTTAATAAACATAA TERM 863 789727 - 789711 - f 71 -6.7 -3.94607 | opp_overlap 789707 789711, overlap 789707 789702 ATAAAATAAAATTAA TCTAAAA ACT TTTTAGA TATAATCTTAATAAA CJE0851 789818 - 790780 + | hypothetical protein CJE0852 790850 - 791191 + | hypothetical protein TERM 864 791223 - 791261 + T 74 -5.6 -4.75404 | gap 1, opp_overlap 791229 791232, overlap 791222 791225 791229 TAAGGTTTTAATTTG C-CTAAATAATTCTAGG CTTTAA CCTAGAATTATTTATAG TTTTTAATGAAATTT TERM 865 791225 - 791258 + T 100 -12.8 -3.28472 | opp_overlap 791229 791232, overlap 791222 791223 791229 AGGTTTTAATTTGCC TAAATAATTCTAGG CTTTAA CCTAGAATTATTTA TAGTTTTTAATGAAA TERM 866 791229 - 791254 + T 86 -9.2 -4.27774 | opp_overlap 791229 791232, overlap 791222 791225 791223 TTTAATTTGCCTAAA TAATTCTAGG CTTTAA CCTAGAATTA TTTATAGTTTTTAAT TERM 867 791254 - 791229 - T 84 -9.9 -3.55622 | opp_overlap 791222 791225 791223 791229, overlap 791232 TTTAATTTGCCTAAA TAATTCTAGGC TTTA ACCTAGAATTA TTTATAGTTTTTAAT TERM 868 791251 - 791232 - T 74 -7.2 -3.91488 | opp_overlap 791222 791229 791225 791223, overlap 791229 AATTTGCCTAAATAA TTCTAGGC TTTA ACCTAGAA TTATTTATAGTTTTT aspC 792421 - 791252 - | aspartate aminotransferase TERM 869 791413 - 791427 + g 76 -2.9 -5.51046 | TTTGGCAAAATTTCA TAGAA TCTTT TTCTA TTTTTTGTATATTTA TERM 870 791703 - 791691 - G 70 -5.5 -4.26188 | overlap 791692 GCCATATAGCCAAAA CGCCA TCC TGGCA TAGCTCCACATTTGC TERM 871 791940 - 791950 + g 83 -3.2 -5.71638 | AAAACCTTGGTTTTA GCTG TGA TAGC TTTTTTTAGTTGTTC cysE 793232 - 792594 - | serine acetyltransferase speA 795068 - 793233 - | arginine decarboxylase TERM 872 793538 - 793550 + g 72 -4.9 -4.89852 | CAAGAAAAAACCCTA GAAAA TAA TTTTC TTTTTCTACATCTAC hisS 796291 - 795065 - | histidyl-tRNA synthetase TERM 873 795640 - 795670 + g 71 -7.7 -3.38378 | overlap 795639 TATTGATCAAAAGCG GAGCATTTTCAAG CAAAT TTTGACAATGCTC ATTTTTACAATCTAA tdk 796866 - 796288 - | thymidylate kinase TERM 874 796356 - 796367 + g 83 -3 -5.79595 | opp_overlap 796356, overlap 796364 CGTCAAGTGTTAAAA TTTC TACA GAAA TTTTTTCTTTTAAAA coaD 797333 - 796857 - | phosphopantetheine adenylyltransferase CJE0859 797936 - 797373 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase flgA 798595 - 797933 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 875 798667 - 798655 - R 77 -7.7 -4.21989 | opp_overlap 798655 TATAAGTTTAACAAA GCCTT TAG AAGGC TTTGTATAGAGTTAA TERM 876 798655 - 798667 + r 75 -7.7 -4.06491 | opp_overlap 798655 TATAAGTTTAACAAA GCCTT TAG AAGGC TTTGTATAGAGTTAA CJE0861 799455 - 798679 - | NLPA family lipoprotein CJE0862 800235 - 799465 - | NLPA family lipoprotein TERM 877 800279 - 800263 - R 100 -8 -5.4833 | GTACTTAAGAAAAAA GTCCCT AGGTA AGGGAC AAAATTAAAAAGCAG CJE0863 801057 - 800284 - | NLPA family lipoprotein TERM 878 801229 - 801249 + r 86 -6.9 -5.03747 | opp_overlap 801232, overlap 801232 CTTATATTTATCTTA AAAGGAGAT ATA ATCTCCTTA TTTTTTGAAACCTTT TERM 879 801232 - 801246 + r 90 -8.6 -4.61482 | opp_overlap 801232, overlap 801229 ATATTTATCTTAAAA GGAGAT ATA ATCTCC TTATTTTTTGAAACC TERM 880 801246 - 801232 - R 83 -8.6 -4.15006 | opp_overlap 801229 801232 ATATTTATCTTAAAA GGAGAT ATA ATCTCC TTATTTTTTGAAACC CJE0864 802158 - 801247 - | ABC transporter, permease protein CJE0865 803165 - 802155 - | ABC transporter, ATP-binding protein valS 805782 - 803170 - | valyl-tRNA synthetase TERM 881 803206 - 803216 + g 70 -4 -4.89729 | TTCAACTGATATTTT TTCA AGT TGAA TTTTTAAATTTTCTA TERM 882 803304 - 803332 + g 100 -9.1 -5.79588 | opp_overlap 803307 TTGAAAGCATGGAGT TAAGCTTGAAA CTTTCTT TTTCAAGCTTA TTTTTTTGATTTTCA TERM 883 803424 - 803436 + g 72 -4.1 -5.10461 | CGCTAACATCACATA TTGCC TTT GGTAA TTTTTCTTCACTAAA TERM 884 803459 - 803477 + g 100 -13.2 -3.42574 | opp_overlap 803453 TCACTAAATTCTATT TGCTCGCA CTT TGCGAGCA TTATGATAAAATTCA CJE0867 806824 - 805805 - | hypothetical protein CJE0868 806953 - 808983 + | putative ATP-dependent DNA helicase TERM 885 809287 - 809268 - g 71 -2.2 -5.40474 | opp_overlap 809274 ATTTTGCTAAAAAAA TTCCAA GTTTAAGT TTGGAA AATTTAAGCGTTTTA TERM 886 809503 - 809493 - g 72 -2.6 -5.36364 | GTAAAAATATAAAAA TTTA TGC TAAA AATTCCAAAGCTGCT CJE0869 809024 - 809764 + | major antigenic peptide PEB2 tpx 809863 - 810390 + | thiol peroxidase TERM 887 810398 - 810420 + F 100 -7.8 -5.10968 | opp_overlap 810402 GCCATTAATTTTTGA TTAAGCCC ATTCTTA GGGCTTAA TTTTTATATCTTCAT TERM 888 811624 - 811646 + G 72 -7.8 -3.69069 | overlap 811630 GTAATCACTTTAGAC GATGAAGAGG CTA CTTCTTTATC TTATCTTGGCGTTAA napA 810637 - 813411 + | nitrate reductase napG 813429 - 814169 + | quinol dehydrogenase periplasmic component napH 814169 - 814948 + | quinol dehydrogenase membrane component napB 814948 - 815469 + | periplasmic nitrate reductase, small subunit TERM 889 815476 - 815486 + G 78 -4 -5.48213 | opp_overlap 815476 GTAAAGTAAATAAAT GAAA AAA TTTC TTTTTATTTTGAGTC TERM 890 815627 - 815652 + G 74 -8.5 -3.54459 | opp_overlap 815627 815645 815646, overlap 815646 CAATATAACATTAAA GATAAAAGTTT AAAA GAACTTTTATC TTTGCCAAAGATTAA TERM 891 815652 - 815627 - g 76 -7.8 -4.00882 | opp_overlap 815627 815646, overlap 815645 815646 CAATATAACATTAAA GATAAAAGTT TAAAAG AACTTTTATC TTTGCCAAAGATTAA napL 815474 - 816388 + | NapL napD 816381 - 816719 + | NapD TERM 892 816850 - 816840 - g 82 -4 -5.54403 | opp_overlap 816840, overlap 816849 AAAAAAGAACAAAAA GAAT TAA ATTC TAGCTTAGAGAAAGA CJE0877 816732 - 816905 + | hypothetical protein TERM 893 816900 - 816888 - f 77 -4.9 -5.09685 | GAATATATAGAAAAA TTGTT TAA AACAA AATAGACATTAAAAA CJE0878 816987 - 817232 + | hypothetical protein CJE0879 817229 - 817720 + | hypothetical protein TERM 894 817898 - 817909 + G 83 -3 -5.76633 | ATTGGGCGCACAAGG CTTT GGAA AAAG TTTTTTTGTGTATAA CJE0880 817776 - 818807 + | polyA polymerase family protein TERM 895 819151 - 819131 - g 88 -9.1 -4.04326 | opp_overlap 819129 819131 GAAGCAAATATCAAA GCTGTGATT TCA AATCACAAC TCTTTAAAGGATTTA purU 818804 - 819628 + | formyltetrahydrofolate deformylase CJE0882 820893 - 819625 - | aminotransferase, putative TERM 896 821475 - 821485 + G 78 -4 -5.45802 | overlap 821481 AAGGAAAAATTTGAG CTTT ATC AAAG TTTTTGTTTTGAACA CJE0883 820935 - 821813 + | hypothetical protein CJE0884 821817 - 822836 + | sensor histidine kinase CJE0885 822935 - 824239 + | hypothetical protein CJE0886 825724 - 824297 - | Mur ligase family protein CJE0887 826444 - 825725 - | hypothetical protein CJE0888 826661 - 826446 - | prevent-host-death family protein TERM 897 826705 - 826676 - R 87 -9.5 -4.07568 | opp_overlap 826676 TTTTTCTTCCTAAAA TACGCTAAATTTT ATGT ATAATTTAGCGTA TTTTGACTTAAAAGC TERM 898 826676 - 826705 + r 89 -9.5 -4.27316 | opp_overlap 826676 TTTTTCTTCCTAAAA TACGCTAAATTTT ATGT ATAATTTAGCGTA TTTTGACTTAAAAGC ddl 827761 - 826721 - | D-alanyl-alanine synthetase A TERM 899 827558 - 827572 + g 73 -3.6 -5.28826 | ACCTCCTTGTTTGAT GAAAAG TTC TTTTTC TTTTTTATAAGCTTT ruvA 828322 - 827771 - | Holliday junction DNA helicase RuvA TERM 900 828201 - 828185 - G 74 -2.2 -5.5112 | opp_overlap 828185 TTGAGTAATAAAAAA CTCATG CTTTT CTTGAG TTTGAATTTTAGCAG CJE0891 830157 - 828298 - | hypothetical protein TERM 901 828520 - 828533 + g 76 -5.3 -5.055 | opp_overlap 828520 TTTATTTATAAAAGT TGCTT CAAA AAGCA TTTTTTGCAAATTGA TERM 902 831145 - 831129 - g 70 -5.3 -4.56597 | TTTCTTTTCCAAAAA TTTTAAA ACA TTTAAAA AGTGATCAAGAAAAT TERM 903 831242 - 831260 + G 90 -8.2 -4.86731 | opp_overlap 831252 GTAGGTTCTGTGTTT GCTTTGGA AAT TTCAAAGC TTTTATTTGAAAGAG TERM 904 831513 - 831525 + G 74 -3.3 -5.38326 | CAGTGGCACTTTCAA GCTCT ATT AGTGC TTTTTATTTGCTTGG mviN 830261 - 831712 + | integral membrane protein MviN TERM 905 831947 - 831932 - g 72 -2.6 -5.42862 | gap 1 AGATTTTGAAAAAAA TGA-CAC AAA GTGGTCA AACTTTAGAGGAAAT cysS 831712 - 833100 + | cysteinyl-tRNA synthetase CJE0894 833093 - 834835 + | ABC transporter, ATP-binding protein/permease MsbA, putative TERM 906 834830 - 834816 - f 86 -5 -5.74086 | opp_overlap 834816 834816 AAAGCAAAGAAAAAA CAAAGC CTA GCTTTA GTTAATTTTAGTTAG pyrD 834867 - 835925 + | dihydroorotate dehydrogenase 2 CJE0896 835922 - 837172 + | M16 family peptidase dapA 837165 - 838061 + | dihydrodipicolinate synthase CJE0898 838061 - 838840 + | 7-alpha-hydroxysteroid dehydrogenase TERM 907 838871 - 838844 - T 100 -11.6 -5.27938 | opp_overlap 838842 838862, overlap 838862 ACTTTTAAATAAAAA TTAAGAAAAATC AATG GATTTTTCTTAA AAATGTTTTTCAATC CJE0899 839186 - 838881 - | hypothetical protein CJE0900 839794 - 839198 - | metallo-beta-lactamase family protein nadE 839868 - 840608 + | NAD+ synthetase lpxK 840612 - 841538 + | tetraacyldisaccharide 4'-kinase TERM 908 842445 - 842433 - g 80 -6.3 -5.00884 | opp_overlap 842433 842431 ATTTGCGTGAAAAAA GTCTT AAG AAGAC TATTTCTCCAGCTAT thrC 841535 - 842947 + | threonine synthase TERM 909 843587 - 843575 - g 76 -2.7 -5.51165 | AAAATGGTAAAAAAA TCAAA ATG CTTGA AATTTCAACAACAAG kdsB 842944 - 843663 + | 3-deoxy-manno-octulosonate cytidylyltransferase CJE0905 843750 - 844997 + | hypothetical protein CJE0906 845091 - 845861 + | amino acid-binding protein TERM 910 845862 - 845876 + T 73 -8.6 -3.17194 | opp_overlap 845850, overlap 845851 GAATTCTTTTTCTAA GAAGGA TTT TCCTTC TTAGGTTACAAAGCT fliP 846611 - 845877 - | flagellar biosynthesis protein FliP TERM 911 846958 - 846939 - g 70 -4.4 -4.85782 | overlap 846947 846949 GCGTTGAAAAAGAAA TTTTAGAA TATT TTCCAAAA ACACAAATTTTAGAG glmU 846755 - 848044 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 912 848680 - 848669 - g 73 -5.8 -4.66833 | overlap 848677 TTTCAAGTGGAAAAA TGGC AAAG GCCA TAGCTGACGCTTTTT TERM 913 849029 - 849019 - g 72 -4 -5.15117 | GAAAATGCGAAAAAA TCTT TAA AAGA TAAGCAACTTGATAT TERM 914 849151 - 849137 - g 76 -8.6 -3.39657 | overlap 849135 ATGAAAATAAAAGCA CTTTGC AAA GCAAAG AAAAATTGGCATTTG coaBC 848041 - 849195 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 915 849688 - 849716 + G 83 -7.6 -4.56775 | overlap 849685 CGCAAGGCATTAGTG TTTTTACACCTT TTGCC AAGGTGCAAAAA TTTTTAAACGAACAT CJE0910 849198 - 849809 + | hypothetical protein uppS 849813 - 850481 + | undecaprenyl diphosphate synthase CJE0912 850478 - 851254 + | A24 family peptidase CJE0913 851254 - 852279 + | hypothetical protein truA 852279 - 853001 + | tRNA pseudouridine synthase A ilvA 854209 - 852998 - | threonine dehydratase CJE0916 854622 - 854209 - | CoA-binding domain-containing protein CJE0917 854741 - 855157 + | hypothetical protein TERM 916 855186 - 855162 - T 75 -7.2 -4.1552 | opp_overlap 855164 TACCTTGCTAAGAAA TACTCCGCAT TCAAG ATGTGGAGTA TTGACAAATTGATCA TERM 917 855164 - 855184 + T 71 -8.3 -3.04501 | opp_overlap 855162 CCTTGCTAAGAAATA CTCCGCATT CAA GATGTGGAG TATTGACAAATTGAT trmA 856217 - 855144 - | tRNA (uracil-5-)-methyltransferase TERM 918 856208 - 856190 - G 72 -7.6 -3.54408 | overlap 856204 TTTCATCTAAAGTAA GAAAATTT CCA AAATTTTC AAGACTCATGGAACT CJE0919 857947 - 856214 - | Na+/H+ antiporter family protein CJE0920 858693 - 857944 - | short chain dehydrogenase/reductase family oxidoreductase TERM 919 858289 - 858272 - G 70 -6.3 -4.17048 | gap 1, overlap 858273 858275 TTGCCTCCAAAATAA GGATTGCG TCC CGCAA-CC GAACCTAAGTTAAAA TERM 920 858289 - 858273 - G 73 -8.7 -3.09908 | overlap 858272 858275 TGCCTCCAAAATAAG GATTGCG TCC CGCAACC GAACCTAAGTTAAAA TERM 921 858571 - 858608 + g 83 -10 -3.61646 | gap 1 TTTGTAAGCATTTTT TAGCTCTT-CTAGACGC TCTTT GCGTCTAGCAAGGGCGA TTACTTTGTAGCCTT CJE0921 859928 - 858690 - | ankyrin repeat-containing protein acnB 862534 - 859988 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase ogt 862589 - 863041 + | methylated-DNA--protein-cysteine S-methyltransferase CJE0924 863974 - 863033 - | hypothetical protein TERM 922 863655 - 863643 - G 78 -4.1 -5.46706 | ATGTTAAAATAAAAA GCCTT GCA AAGAC TTAGTTCGTAAGATT metG 865864 - 863978 - | methionyl-tRNA synthetase TERM 923 865662 - 865650 - G 72 -6.3 -4.35524 | opp_overlap 865649 TTTTTAAATTCAAAA CTGAT TTT ATCAG CGTATTCTTGAGGAG CJE0926 866071 - 865874 - | hypothetical protein fbp 866906 - 866064 - | fructose-1,6-bisphosphatase mobB 867399 - 866908 - | molybdopterin-guanine dinucleotide biosynthesis protein MobB TERM 924 867864 - 867840 - gR 87 -11.5 -2.93089 | overlap 867837 GATTATTTTAAAGTA TCTCTTCCTAG TGT CAAGGAAGAGA CTAAGCTTGTAGCTA CJE0930 869502 - 867877 - | soluble lytic murein transglycosylase, putative CJE0929 867495 - 867980 + | putative lipoprotein TERM 925 868405 - 868419 + gT 84 -5.8 -5.11937 | opp_overlap 868404 868407, overlap 868384 ATTGTCATAATAAGG CATTAT AAA ATAATG TTTTTTAAAATTATT TERM 926 868883 - 868905 + gT 75 -4.2 -5.19212 | overlap 868873 868881 868888 TTTATTTCTAGCATA GAATATCTAA ATT TTGGATTTTC TTTTTTAATAATAAT TERM 927 868888 - 868900 + gT 72 -2.7 -5.45813 | overlap 868881 868883 TTCTAGCATAGAATA TCTAA ATT TTGGA TTTTCTTTTTTAATA CJE0931 869780 - 869499 - | YGGT family protein gltX 871078 - 869783 - | glutamyl-tRNA synthetase TERM 928 871265 - 871275 + G 72 -2.6 -5.48163 | opp_overlap 871265 TACTCTTTTTAAGTA TTTT TAT AAAA TTTTTTCCTTTATTT CJE0933 871164 - 872288 + | Ser/Thr protein phosphatase family protein psd 872285 - 873085 + | phosphatidylserine decarboxylase CJE0935 873363 - 873082 - | FlhB domain-containing protein CJE0936 875471 - 873360 - | hypothetical protein CJE0937 876651 - 875464 - | major facilitator family protein TERM 929 875739 - 875708 - G 71 -7.4 -3.73042 | overlap 875706 TTGCTTACTAAAACA TCATTTGCTCTAGC AAGT GCTAAAGCATATAA GCAAAATATTCCTAT CJE0938 877132 - 876629 - | hypothetical protein TERM 930 877029 - 877017 - G 95 -6.3 -5.69023 | AAAACACTAAAAAAA GCTAT TTC ATAGC TTAAAAATGTATCTA CJE0939 877461 - 877132 - | hypothetical protein hemL 878732 - 877458 - | glutamate-1-semialdehyde aminotransferase TERM 931 877762 - 877783 + g 79 -5.2 -5.29885 | TTTTTTGCTAATTTT CCAAGTTT GTCATA AAGCTTGG TTTTCTTTTTGGCTT TERM 932 878704 - 878717 + g 80 -2.4 -5.73978 | GCGATGAATTTACAC GCTT CTTTAA AAGC TTTTTTGTTTGTCAT CJE0941 879076 - 878729 - | hypothetical protein TERM 933 878857 - 878839 - G 73 -9 -3.15544 | opp_overlap 878829 CTTTACTCTGATTAA GAGAATTT TTA AAATTCTC AAAACTAAGATTTTG TERM 934 879228 - 879218 - g 91 -4 -6.11229 | ATTAAAAGAAAAAAA TCAA TTT TTGA AAAGCAAAGGGATTG folD 879156 - 880004 + | folD bifunctional protein TERM 935 880544 - 880512 - g 71 -2.2 -5.48825 | gap 2, overlap 880514 880516 880518 TATGATCCAAAAAAA GATATAGAAAGCGATA TTT TA-CGCTTTCT-TAGC ATAGGTGATTTTGCT lepB 880014 - 880862 + | signal peptidase I TERM 936 880860 - 880886 + T 95 -11.1 -3.90316 | opp_overlap 880858 880863, overlap 880858 880863 GAGGATAAATTAAGC TAATGTTTGTG AAAAA CACAAACATTA TATTTTTAAAAGCGT TERM 937 880863 - 880883 + T 83 -8.4 -4.07746 | opp_overlap 880863 880858, overlap 880860 880858 GATAAATTAAGCTAA TGTTTGTG AAAAA CACAAACA TTATATTTTTAAAAG TERM 938 880883 - 880863 - T 73 -8.4 -3.27667 | opp_overlap 880860 880858 880863, overlap 880858 GATAAATTAAGCTAA TGTTTGTG AAAAA CACAAACA TTATATTTTTAAAAG TERM 939 880899 - 880913 + T 74 -2.8 -5.73563 | opp_overlap 880898 880899, overlap 880900 TTATATTTTTAAAAG CGTGAT TTC ATCACC TTTTTTTAATTTGCT TERM 940 880900 - 880912 + T 70 -6.3 -4.01698 | opp_overlap 880898 880899, overlap 880899 TATATTTTTAAAAGC GTGAT TTC ATCAC CTTTTTTTAATTTGC CJE0944 882044 - 880884 - | molybdopterin biosynthesis MoeA protein, putative murA 883297 - 882041 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 941 883346 - 883314 - R 76 -6.6 -4.56597 | gap 1, opp_overlap 883314 TTTTTCCTTGAAAAA GTTTAAAAATGC-AT CATT ATAGCATTCTTAAAC TTTTGAAAAAATATA CJE0946 883791 - 883363 - | hypothetical protein TERM 942 883834 - 883866 + H 70 -3.7 -5.11112 | TACACTAAATCGACA TTATTTTAAAAAATA TAC TATAATTTAAAATAA TTTTTATTAAGGTTT TERM 943 884022 - 884047 + G 71 -4.9 -4.77757 | AGGGTTAATTTTAAT TTTTTTAAGTT TTAA AACTCAAAAAA TTTTAGTTTTTGCAA TERM 944 884499 - 884517 + G 100 -9 -5.71712 | opp_overlap 884496 GGGTTTAATTCACTA TGCTTTTA ACT TAAAAGCA TTTTTTTCTATGGGC CJE0947 883885 - 884757 + | integral membrane protein pabA 885310 - 884744 - | para-aminobenzoate synthase glutamine amidotransferase, component II TERM 945 885074 - 885086 + g 85 -3.5 -5.79526 | overlap 885085 TCCTAAACATATACC TAAAA TTT TTTTA TTTTTTTTAAAATAT pabB 887091 - 885307 - | para-aminobenzoate synthase glutamine amidotransferase, component I TERM 946 885560 - 885548 - G 72 -2.7 -5.40072 | TTTTCGTTAAAAAAA GCTAT GTC ATAAC ACAAGTTTTGCTGCC TERM 947 886851 - 886862 + g 74 -3 -5.40072 | CGATATCTTCTTTTT GAAA TTTT TTTC TTTTTTTAAAAGCAA TERM 948 886977 - 886959 - G 74 -6.2 -4.36411 | opp_overlap 886959 CAGCAAGCATTAAAA TATAAAAA TCA TTTTTATA TTTTTCTATAAATTT TERM 949 886959 - 886977 + g 81 -6.2 -5.01546 | opp_overlap 886959 CAGCAAGCATTAAAA TATAAAAA TCA TTTTTATA TTTTTCTATAAATTT CJE0950 888145 - 887081 - | phage integrase family site specific recombinase TERM 950 888222 - 888237 + H 74 -4.8 -5.01422 | opp_overlap 888222 CTTAGTAAAAAAAAG CTTTTT TAGG AAAAAG TTTGTTTTTATATGC TERM 951 888752 - 888740 - H 77 -4.9 -5.17507 | overlap 888730 AAAACTTAATAAAAA GTTTT ATC AAAAC CAAATTTCAAGGAGA dsbA 888773 - 889435 + | thiol:disulfide interchange protein DsbA TERM 952 890029 - 890043 + G 79 -5 -5.25799 | ATGAATATGGCAATC TGCTGT CTT ATAGCA TTTTTATGTTGTTTT dsbB 889447 - 890232 + | putative disulfide oxidoreductase TERM 953 890227 - 890270 + F 91 -9.3 -4.6759 | gap 1, opp_overlap 890235, overlap 890235 GTCGTTTTAAGATAC TCTTAA-AATACGCAACAAA TTATT TTTGTTGCGTATTATTAAAA TTTTATTAAGCTATT TERM 954 890235 - 890261 + F 100 -12.5 -3.73709 | opp_overlap 890235, overlap 890227 AAGATACTCTTAAAA TACGCAACAAA TTATT TTTGTTGCGTA TTATTAAAATTTTAT TERM 955 890261 - 890235 - f 100 -12.5 -4.1413 | opp_overlap 890235 890227 AAGATACTCTTAAAA TACGCAACAAA TTATT TTTGTTGCGTA TTATTAAAATTTTAT TERM 956 891773 - 891806 + F 100 -10.6 -5.81412 | opp_overlap 891773, overlap 891803 TTCAATCCTAAAAAA TAAATAAGCCCAAA TTTATT TTTGGGTTTATTTA TTTTTTTTAAATAAA TERM 957 891806 - 891773 - f 100 -8.4 -5.09426 | opp_overlap 891773 891803 TTCAATCCTAAAAAA TAAATAAGCCCAAA TTTATT TTTGGGTTTATTTA TTTTTTTTAAATAAA CJE0954 891829 - 892500 + | thiol:disulfide interchange protein DsbA, putative TERM 958 892502 - 892537 + F 100 -12.2 -5.2112 | opp_overlap 892505, overlap 892505 GTAATATGAAATAAT AAATTTTTAAGGCAAT AAAA ATTGCCTTAAAAATTA TTTTTTGATCATATT TERM 959 892505 - 892534 + F 100 -13.9 -4.68456 | opp_overlap 892505, overlap 892502 ATATGAAATAATAAA TTTTTAAGGCAAT AAAA ATTGCCTTAAAAA TTATTTTTTGATCAT TERM 960 892534 - 892505 - f 100 -13.9 -4.61162 | opp_overlap 892505 892502 ATATGAAATAATAAA TTTTTAAGGCAAT AAAA ATTGCCTTAAAAA TTATTTTTTGATCAT CJE0958 893729 - 893869 + | hypothetical protein CJE0959 894489 - 893857 - | putative periplasmic protein TERM 961 893919 - 893950 + g 73 -6 -4.54449 | overlap 893920 CTTTAAAAGAAGGTG ATTGGATAAATAGT TTGC ACTCTTTATCCAAA TTTTCTATCCCGTAT TERM 962 893920 - 893949 + g 78 -9.5 -3.31946 | overlap 893919 TTTAAAAGAAGGTGA TTGGATAAATAGT TTGC ACTCTTTATCCAA ATTTTCTATCCCGTA CJE0960 894728 - 894486 - | hypothetical protein TERM 963 894667 - 894647 - G 71 -5.5 -4.4009 | CTCCAGCGTATAAAA GCATAGCTT CTA AAACTATAC TAAGCTCATATTGCA CJE0961 895758 - 894712 - | hypothetical protein TERM 964 895707 - 895697 - G 72 -2.6 -5.45802 | TTTTTAAAATAAAAA TTTA CTA TAAA TTGACAAGCATAGCC flhA 897941 - 895767 - | flagellar biosynthesis protein FlhA CJE0963 898338 - 897928 - | RrF2 family protein, putative TERM 965 898224 - 898190 - G 76 -9.6 -2.66106 | opp_overlap 898189 898188 898191, overlap 898186 GATTTTAACAAGCCA TCTTTAGCTAAAGTTT GTA AAATTTTAGCTAAAAA ACTTTTAGGAATATC TERM 966 898580 - 898567 - g 70 -3.8 -5.03747 | AAATTCGCTAAAAAA CCAG GTGATA CTGG TTCAACAGAAGTTCA rpsO 898513 - 898785 + | 30S ribosomal protein S15 CJE0965 901696 - 898871 - | cell division protein FtsK, putative TERM 967 899403 - 899387 - G 82 -10.9 -2.61264 | opp_overlap 899386 899390, overlap 899386 899390 TTGTGTAGCTACAAT CAAGTGG ATT CCACTTG CTCTTGCCATTTGCG TERM 968 900988 - 901003 + g 77 -9 -3.63991 | TTTTACTAGCCTTTT GTGCGA AATT TCGCAC TTGTTGAGAATACTC TERM 969 901649 - 901634 - G 72 -4 -5.02357 | TATAAGCAAAGAAAA TGGATA ATAA TACCCA AATTCTCCAAATAAA CJE0966 904073 - 901821 - | flagellar hook-associated protein TERM 970 901884 - 901900 + g 78 -9.5 -3.22409 | opp_overlap 901877, overlap 901878 AAGAGAAGCTTGATA TGCAAGT TGA ACTTGCA TTAAATTCATCATTG TERM 971 904392 - 904376 - R 75 -9.5 -2.62983 | overlap 904379 CTCAGGGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGGGTTCGA CJE0967 906385 - 904454 - | ABC transporter, ATP-binding protein TERM 972 904667 - 904683 + g 83 -2.2 -5.95286 | CTCATTTTCTTTGTA GCTCAA TTTTT TGGAGC TTTTTTCTTTTTGGT TERM 973 905064 - 905054 - G 70 -5.4 -4.65895 | GCTTTTATCTAAAAA TTCC TTA GGAA ATAGAAAATTTTTCA TERM 974 905340 - 905351 + g 74 -3 -5.42164 | opp_overlap 905340, overlap 905334 ATACGCGTTGAAAAA TCTT TAAA AAGA TTTTTATTGTTTATA TERM 975 905502 - 905518 + g 89 -9.5 -4.29049 | overlap 905499 TTTTTCGCTTCTTCA CGCATTT TAA AAATGCG TTCTTTTCGTCCTTC TERM 976 906175 - 906186 + g 70 -4.4 -4.89729 | opp_overlap 906175, overlap 906169 CAACGGTTTGTGAAA GCAT GGCT ATGC TTTTTCCATTTTGTC TERM 977 906338 - 906349 + g 74 -3 -5.43866 | TTCATTTAAAACTAT TTTG TCTC CAAA TTTTTTTGAAGCTTC CJE0968 907678 - 906389 - | sensor histidine kinase TERM 978 907019 - 907039 + g 93 -5.5 -6.12458 | AAGCTGAGTATTTTT TAAAGTGAT TTT ATCGCTTTG TTTTTTATTTTTTTG TERM 979 907539 - 907551 + g 76 -2.7 -5.54885 | AATTTTAAAACATCA TCAAG GCT TTTGA TTTTTTGTTCATATT CJE0969 908334 - 907672 - | DNA-binding response regulator serA 909904 - 908321 - | D-3-phosphoglycerate dehydrogenase CJE0971 910389 - 909901 - | hypothetical protein rpsA 912059 - 910389 - | 30S ribosomal protein S1 ispH 913024 - 912191 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase aroA 914300 - 913014 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 980 913821 - 913838 + g 82 -7.1 -4.77757 | opp_overlap 913831, overlap 913831 AGCCGAAGAAATTTC GCTTTTA AAAT TAAAAGC TTTTAATTTTTGACC pheT 916618 - 914297 - | phenylalanyl-tRNA synthetase subunit beta TERM 981 914421 - 914403 - G 72 -2.5 -5.45802 | overlap 914404 TCCCTAAAAGAAAAA CTTATAG TAATG CTATAAA ATTCTTTAAGGTTTT TERM 982 915528 - 915544 + g 70 -8.1 -3.18274 | AGCAAAAAATCCATT CCTAAAT TTA ATTTAGG TTCACTTCCCCTAAA pheS 917607 - 916615 - | phenylalanyl-tRNA synthetase subunit alpha CJE0977 917730 - 918095 + | HIT family protein TERM 983 918093 - 918127 + T 100 -16.1 -4.37886 | opp_overlap 918102 CCTCAAGCTTTATTT TAGTTTAAATGGTAG AAAAA CTACCATTTAAACTA TTTTGTCAAAGGTAG thiJ 918694 - 918125 - | 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme CJE0979 918866 - 918687 - | hypothetical protein CJE0980 918949 - 919692 + | His/Glu/Gln/Arg/opine amino acid ABC transporter permease TERM 984 920049 - 920033 - g 83 -3 -5.66684 | GAAGCCATAAAAAAA GCAAAA TTACT TCTTGC TAAGGTGGGTTTAGC CJE0981 919685 - 920413 + | amino acid ABC transporter, ATP-binding protein TERM 985 920414 - 920438 + T 100 -11.6 -4.25283 | opp_overlap 920414 GTTTTGAATCATTAA TTCATAAGCC ACTAA GGCTTATGAA TTTTAATCCCAACAT TERM 986 920438 - 920414 - T 90 -11.6 -3.27298 | opp_overlap 920414 GTTTTGAATCATTAA TTCATAAGCC ACTAA GGCTTATGAA TTTTAATCCCAACAT CJE0982 921907 - 920441 - | amino acid carrier protein CJE0983 922478 - 922011 - | RNA methyltransferase alr 923467 - 922481 - | alanine racemase CJE0985 924445 - 923468 - | hypothetical protein TERM 987 924707 - 924687 - g 70 -4.1 -4.96845 | overlap 924688 ATAAAAAGAAAGAAA GTGTATTTA GCT TAAATACAT GCCAACCTCTAACTT TERM 988 924706 - 924688 - g 72 -7.6 -3.54447 | overlap 924687 TAAAAAGAAAGAAAG TGTATTTA GCT TAAATACA TGCCAACCTCTAACT CJE0986 924602 - 925072 + | hypothetical protein CJE0987 925158 - 925577 + | hypothetical protein TERM 989 925820 - 925780 - g 74 -9.3 -2.82668 | opp_overlap 925788, overlap 925779 925788 925811 CCCTAAATCCCAAAC CCTTACAATCTTTAGATGT TAC AAATCTAAAGATTGTAAAT CTAGGAAATTATAAC CJE0988 925581 - 926033 + | hypothetical protein TERM 990 926583 - 926561 - g 73 -8.6 -3.15197 | opp_overlap 926553 926555 926565, overlap 926564 CAAGAAATTTTAAGA GAACTTAGAA TTT TTCTAAATTC TCAATAATTATACTT CJE0989 926030 - 926590 + | SCO1/SenC family protein cysK 927496 - 926597 - | cysteine synthase A TERM 991 927578 - 927566 - R 74 -4.9 -5.06223 | opp_overlap 927566 ATAAAGTAAATAAAA GATAT AAA ATATC TGGATTAATTAAGAA TERM 992 927616 - 927598 - R 86 -8.9 -4.27694 | TTAATTAAGAAAGAA GGCTAGA ATTTA TCTAGCC GAAGTTTTATTTTTT hup 927919 - 927623 - | DNA-binding protein HU TERM 993 928001 - 928016 + r 71 -4.8 -4.86216 | AACAGCTTTTTTTAA GTTTTT TTCA AAAAAC TTTATTATTTTTTCT ciaB 929853 - 928021 - | invasion antigen B TERM 994 928847 - 928869 + g 76 -6.4 -4.58563 | overlap 928845 CAAATATAAAGTTGA GTTTTTTCTA TAT TAGATAAAAC TTCTTTTTCTAATTC TERM 995 929331 - 929342 + g 81 -5.8 -5.22312 | TTCGCTCACAAATTT CTCC TTCT GGAG TTTTTTGATATAAAT CJE0993 929915 - 930328 + | thioesterase family protein CJE0994 930565 - 930368 - | hypothetical protein cstA 932657 - 930546 - | carbon starvation protein A TERM 996 931327 - 931337 + g 73 -8.2 -3.40052 | opp_overlap 931326, overlap 931326 CCTATAGCAAAAGTC GGGG CTC CCCC TGTTCTTGAAAGTAT TERM 997 931686 - 931674 - G 78 -4.1 -5.47159 | GGTAATAAATAAAAA TGGAA ACA CTCCA CCTGCAAATACTGGA TERM 998 932820 - 932788 - R 72 -4.3 -4.94902 | opp_overlap 932794, overlap 932789 932794 TAAGTAGCATAAAAA TGAAAAGCTTAAAAA TAA TCTTTAAGCTTTTTT AATCTAAATAAAGAG TERM 999 932819 - 932789 - R 74 -7.8 -3.55857 | opp_overlap 932794, overlap 932788 932794 AAGTAGCATAAAAAT GAAAAGCTTAAAAA TAA TCTTTAAGCTTTTT TAATCTAAATAAAGA TERM 1000 932794 - 932814 + r 81 -5.5 -5.22312 | opp_overlap 932789 932788 932794 GCATAAAAATGAAAA GCTTAAAAA TAA TCTTTAAGC TTTTTTAATCTAAAT TERM 1001 932814 - 932794 - R 86 -7.7 -4.82678 | opp_overlap 932794, overlap 932789 932788 GCATAAAAATGAAAA GCTTAAAAA TAA TCTTTAAGC TTTTTTAATCTAAAT prsA 933753 - 932824 - | ribose-phosphate pyrophosphokinase TERM 1002 933864 - 933829 - R 87 -10.8 -3.5771 | opp_overlap 933837, overlap 933837 AAAAACTGCTGTAAA TTTAAAAAGCTTATAT AAAA ATATAAGCTTTTTAAG AAATGTAAGCTGTCT TERM 1003 933856 - 933837 - R 89 -8 -4.81249 | opp_overlap 933837, overlap 933829 CTGTAAATTTAAAAA GCTTATAT AAAA ATATAAGC TTTTTAAGAAATGTA TERM 1004 933837 - 933856 + r 86 -8 -4.59109 | opp_overlap 933837 933829 CTGTAAATTTAAAAA GCTTATAT AAAA ATATAAGC TTTTTAAGAAATGTA CJE0997 934519 - 933860 - | amino acid ABC transporter, permease protein PEB1 CJE0998 935282 - 934530 - | amino acid ABC transporter, permease protein PEB1 pebA 936063 - 935284 - | bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein pebC 936813 - 936085 - | amino acid ABC transporter, ATP-binding protein PEB1 TERM 1005 936444 - 936408 - G 100 -12.5 -3.59979 | opp_overlap 936403 GTTGTCCACCTGAAA GGGTTGCTGGATAAA CATTTGC TTTATCCAGCAAACC TACAACTTTTAAATA cheR 937737 - 936949 - | chemotaxis protein methyltransferase CheR cheB 938307 - 937753 - | protein-glutamate methylesterase CheB rpiB 938473 - 938910 + | ribose 5-phosphate isomerase B CJE1004 938910 - 939242 + | hypothetical protein apt 939239 - 939787 + | adenine phosphoribosyltransferase CJE1006 939806 - 940402 + | DedA family protein CJE1007 940399 - 941850 + | leucyl aminopeptidase CJE1008 941847 - 942950 + | translation-associated GTPase TERM 1006 942967 - 942944 - T 78 -9.7 -3.12999 | opp_overlap 942944 942943 942941 GCATTTTAGATTCAA TGTTTAGGC AAAATA GCCTAAACA ATATTTATAAATTTT TERM 1007 942944 - 942967 + T 75 -9.7 -2.75876 | opp_overlap 942944, overlap 942943 942941 GCATTTTAGATTCAA TGTTTAGGC AAAATA GCCTAAACA ATATTTATAAATTTT argH 944354 - 942972 - | argininosuccinate lyase TERM 1008 943870 - 943858 - G 83 -3.4 -5.71295 | opp_overlap 943862, overlap 943862 ATATAAAAAGAAAAA CTCA CAGGC TGAG CGTGTTGTAAATGTG pckA 945938 - 944364 - | phosphoenolpyruvate carboxykinase CJE1011 947750 - 945951 - | oxaloacetate decarboxylase, alpha subunit, putative TERM 1009 947812 - 947793 - R 72 -4.4 -5.01497 | opp_overlap 947793 ATTATTATACAAAAA TTTGATAA CACA TTACCAAA ATTATTGCTATAGGC CJE1012 949122 - 947782 - | sodium transporter, putative TERM 1010 947877 - 947904 + g 74 -2.2 -5.5112 | AAATTTTTCGACTTA TAAATTTAGAAA AAAT TTTATAAATTTG TTTTTTATTCATAAA TERM 1011 948876 - 948898 + g 72 -7.8 -3.66095 | CGCCATATCGCCATC TATTGCCATA TTT TATGGCAAGA TTTGAATAAGCATTT CJE1013 950469 - 949135 - | sodium transporter, putative atpE 950702 - 951040 + | F0F1 ATP synthase subunit C TERM 1012 951052 - 951065 + F 85 -5.2 -5.37043 | opp_overlap 951052 ATAAAACTTATTAAA GCCC TTTTTT GGGC TTTTTTCTATGCGGT TERM 1013 951300 - 951273 - f 79 -5.8 -5.00616 | opp_overlap 951261 951292, overlap 951258 GGTTTTTTTAAAAAA CTTAAAAAATAT TAAG ATTTTTTTTAAG TATAAAGAATATAAT TERM 1014 951566 - 951581 + G 76 -2.6 -5.6473 | gap 1 TTATTGGATTGTTTA GCTG-TA TAC TAGCAGC TTTTTTTGCTATTCT TERM 1015 951945 - 951960 + G 71 -7.6 -3.48208 | overlap 951944 951952 TTTATTTGGTGCCTC TGCAAC CCCT GTTGCA CTTTTTGCTATAGGT CJE1015 951358 - 952269 + | hypothetical protein aas 955789 - 952277 - | 2-acyl-glycerophospho-ethanolamine acyltransferase TERM 1016 953448 - 953460 + g 77 -4.9 -5.2696 | opp_overlap 953435 ACTGCTAGCATCATG CTAAA AAT TTTAG TTTTTTGCATTTTAA CJE1017 956214 - 955834 - | hypothetical protein TERM 1017 955973 - 955989 + g 82 -5.1 -5.37345 | AATTCTGCAACCTTG CTAGCAA ATT TTGCAAG TTTTTTATCATTACA CJE1018 957800 - 957015 - | His/Glu/Gln/Arg/opine ABC transporter permease TERM 1018 957756 - 957771 + g 86 -3.4 -5.86609 | overlap 957767 TGACTTTGATAGAGG TTTTAA AGGT TTAAAA TTTTTATTTTTTTGA TERM 1019 957767 - 957777 + g 72 -2.6 -5.47218 | overlap 957756 GAGGTTTTAAAGGTT TAAA ATT TTTA TTTTTTTGAATAAAC CJE1019 959028 - 957823 - | permease, putative TERM 1020 958104 - 958136 + g 82 -10.7 -2.64144 | opp_overlap 958071, overlap 958078 958103 958106 AACTCTTTTTTACCT CATTTTTGCTTGCAC CTA GAGCAAGTAAAAGTG CTATTTCACTGCGAC TERM 1021 958308 - 958322 + g 72 -4.4 -5.04987 | CAGCATAATCATCTT TTAAAT AAG ATTTAA TTTTTTCAACATCTT secA 961613 - 959025 - | preprotein translocase subunit SecA lolA 961713 - 962222 + | outer-membrane lipoprotein carrier protein CJE1022 962953 - 962219 - | hypothetical protein CJE1023 964306 - 962963 - | hypothetical protein TERM 1022 964140 - 964121 - G 87 -3.5 -5.95539 | overlap 964138 CCCTAAACAAAAAAA GCTGTGT AAAGTA ACACCGC CTATATTAAACGCCG TERM 1023 965135 - 965116 - g 84 -6.6 -5.23765 | opp_overlap 965116 965115 CAAAGAAGATAAAAA CTATTTTT ATGG AAAAATAG GTTCTAAAAAATATA TERM 1024 965408 - 965396 - g 81 -2.7 -5.77853 | AATTCTCAAAAAAAA GATTT TTT AAACC GCTTTGGGAAAGCTT CJE1024 964355 - 965701 + | putative lipoprotein TERM 1025 965729 - 965699 - T 100 -10 -4.87008 | opp_overlap 965702, overlap 965702 AATATACAAAACAAA TAAGATTTATTGAT TTA ATCAATAAATCTTT TAGTTAAATCTGCAA TERM 1026 965726 - 965702 - T 100 -11.7 -4.49673 | opp_overlap 965702, overlap 965699 ATACAAAACAAATAA GATTTATTGAT TTA ATCAATAAATC TTTTAGTTAAATCTG TERM 1027 965702 - 965726 + T 100 -11.7 -4.44548 | opp_overlap 965699 965702 ATACAAAACAAATAA GATTTATTGAT TTA ATCAATAAATC TTTTAGTTAAATCTG CJE1025 966585 - 965713 - | carbon-nitrogen family hydrolase TERM 1028 966226 - 966214 - G 70 -3.5 -5.14626 | AGGAGTAAAATAAAA TTTTT CAT AAAAA CAAGGATCATCGGGT CJE1026 967469 - 966582 - | cation efflux family protein TERM 1029 966863 - 966892 + g 88 -9.5 -4.07568 | opp_overlap 966880, overlap 966864 966866 TAGGTAAAGCCTCAT CCATTAAAAAAGC TAAA GCTTTTTTAATGA TTTTAAAAGCAGAAA TERM 1030 966864 - 966891 + g 100 -13 -3.04398 | opp_overlap 966880, overlap 966863 966866 AGGTAAAGCCTCATC CATTAAAAAAGC TAAA GCTTTTTTAATG ATTTTAAAAGCAGAA TERM 1031 966866 - 966889 + g 78 -9.8 -3.08032 | opp_overlap 966880, overlap 966864 966863 GTAAAGCCTCATCCA TTAAAAAAGC TAAA GCTTTTTTAA TGATTTTAAAAGCAG TERM 1032 967438 - 967451 + g 80 -2.3 -5.75945 | opp_overlap 967435 ATGGCACATAAACTT GCTAC AAGA GTTGC TTTTTTTTGCAAACT CJE1027 968443 - 967466 - | peptidyl-arginine deiminase family protein TERM 1033 967591 - 967601 + g 72 -4 -5.01535 | AAAGTCTTTTAGCTA TGAT TTC ATCA TTTTTATCCTTATAA TERM 1034 968516 - 968531 + r 73 -9 -2.80876 | opp_overlap 968508 968516, overlap 968515 AATTTAAGAAGATTA CCTCGA TATT TCGAGG CTTTAGGATATTATT TERM 1035 968531 - 968516 - R 73 -9 -2.86661 | opp_overlap 968516 968515, overlap 968508 AATTTAAGAAGATTA CCTCGA TATT TCGAGG CTTTAGGATATTATT CJE1028 968976 - 968542 - | putative lipoprotein TERM 1036 968634 - 968613 - G 71 -4.5 -4.70879 | opp_overlap 968600, overlap 968632 TTGAAATTTTAAAAA TTCCTTTGA AATT TGAAAGGAA AGAATTTTCAAAATC CJE1029 969111 - 968992 - | hypothetical protein CJE1030 969660 - 969127 - | methyl-accepting chemotaxis protein TERM 1037 969258 - 969268 + g 78 -4 -5.39681 | CATTTAAAGCTTGTA TACT TTG AGTA TTTTTCTTTAATTCT TERM 1038 970584 - 970610 + r 76 -8.2 -3.6581 | opp_overlap 970583 970595, overlap 970581 TTTTAAACATCATAG TTTCCTAAAAAT AAA ATTTTTCGGAAA TATTTTACACATAAT purH 972209 - 970677 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1039 970873 - 970836 - G 71 -2.1 -5.46698 | gap 1, overlap 970853 TCTAAAAGGAAAAAA GGCTTCACTTGCTAAAAC GCA ACCTT-GCAAATCAAGCC CCATTTCTTTAGCTT TERM 1040 971587 - 971597 + g 70 -4 -4.93898 | overlap 971584 TTTTCTCCATATTTT GTAT CAA ATAC TTTTTGTCCTACTAT CJE1034 972850 - 972212 - | DnaJ domain-containing protein TERM 1041 972319 - 972331 + g 85 -4.9 -5.54894 | opp_overlap 972319 TGTTTGCATTTAAAA TATCA GGA TGATA TTTTTTTGCTAAATT purL 975165 - 972979 - | phosphoribosylformylglycinamidine synthase II trmE 976504 - 975176 - | tRNA modification GTPase TrmE TERM 1042 975300 - 975289 - G 72 -4.4 -5.0925 | opp_overlap 975289, overlap 975290 975291 975297 GTTCAAAAGCAAAAA GTTC TAAA GAAC TTTCCTCTAAAAGTC CJE1037 977315 - 976497 - | hypothetical protein TERM 1043 976732 - 976719 - G 70 -5.3 -4.58395 | TTGATTTTCTAAAAA TTGAG CGAT CTCAA GGCGCACTAAAAGAT TERM 1044 977134 - 977152 + g 95 -6.1 -6.02546 | GTAAATTCTTTTTTA GGATTTT TTTTC AAAATCC TTTTTTTTGCTTTAG TERM 1045 977320 - 977332 + r 72 -3.3 -5.36965 | TCGATTTTCATTTTT CATGC TCC GCTTG TTTTTTGTGATGTTC CJE1038 978904 - 977312 - | putative inner membrane protein translocase component YidC TERM 1046 978381 - 978407 + g 70 -6 -4.22948 | opp_overlap 978381 GGATAAAAAGTAATA TCTTTTTCGATT TTC AATCCAGAAAGA TTTTGAGTGAGTTTT TERM 1047 978471 - 978456 - G 70 -6.2 -4.19587 | overlap 978454 TCATCAACAAAAAGA TTGCTA GCGT TAGCAA CATAAGGAATTTTAA TERM 1048 978624 - 978612 - G 75 -4.1 -5.27335 | TCTTTTAAATAAAAA GCAGA AAT TCTAC CAAAAGAGTCAATTT CJE1039 979242 - 978901 - | hypothetical protein rnpA 979565 - 979239 - | ribonuclease P protein component TERM 1049 979433 - 979447 + g 93 -4.3 -6.15828 | TTCCAACTTTTTTAC TAGCA ACAAC TGCTA TTTTTTTTTCATAAC rpmH 979696 - 979562 - | 50S ribosomal protein L34 CJE1042 979827 - 980306 + | acetyltransferase CJE1043 980303 - 980911 + | hypothetical protein TERM 1050 980928 - 980918 - g 76 -2.6 -5.52384 | opp_overlap 980918 980912 980909 TTTTTATGAAAAAAA TATT TTT AATA TTTTTCTTATCTTGC CJE1044 980908 - 982098 + | hypothetical protein TERM 1051 982078 - 982110 + T 74 -7.9 -3.65214 | opp_overlap 982079 982080, overlap 982079 982079 CAAGGTAAGCAAGCA AGCTTTGAAGAATTA AAA TAATTCTTCAAAGAG CTTTTTTAACTGCAT TERM 1052 982079 - 982109 + T 84 -11.4 -2.78405 | opp_overlap 982079 982080, overlap 982078 982079 AAGGTAAGCAAGCAA GCTTTGAAGAATTA AAA TAATTCTTCAAAGA GCTTTTTTAACTGCA TERM 1053 982109 - 982079 - T 87 -11.4 -3.46482 | opp_overlap 982079 982078 982079, overlap 982080 AAGGTAAGCAAGCAA GCTTTGAAGAATTA AAA TAATTCTTCAAAGA GCTTTTTTAACTGCA TERM 1054 982079 - 982111 + T 81 -5.2 -5.09895 | gap 2, opp_overlap 982079 982080, overlap 982079 982078 AAGGTAAGCAAGCAA GCT-TT-GAAGAATTA AAA TAATTCTTCAAAGAGC TTTTTTAACTGCATA TERM 1055 982108 - 982080 - T 100 -14.9 -2.67166 | opp_overlap 982079 982078 982079, overlap 982079 AGGTAAGCAAGCAAG CTTTGAAGAATTA AAA TAATTCTTCAAAG AGCTTTTTTAACTGC CJE1045 982464 - 982090 - | thioesterase family protein CJE1046 982670 - 982572 - | hypothetical protein TERM 1056 983457 - 983445 - H 77 -4.9 -5.22104 | TAAAAAACAATAAAA TCTTT ATC AAAGA TGCTAATATGATTAT TERM 1057 984403 - 984391 - H 71 -4.9 -4.77165 | opp_overlap 984391 984395, overlap 984395 CTGCTTATAATAAAA TCATT ATC AATGA TACTTTATTTGGTGT CJE1048 984859 - 984987 + | hypothetical protein TERM 1058 984980 - 985025 + F 100 -17.5 -4.89852 | gap 1, opp_overlap 984985 984989 985016, overlap 984985 GCATTTACGCAAGGA TA-AAATAAATCATTCCTATCT TTA AGATAGGAATGATTTATTTGTA TTTTTATAAATATAA TERM 1059 985019 - 984985 - f 100 -19 -4.55491 | opp_overlap 984980 984985, overlap 984989 985016 TACGCAAGGATAAAA TAAATCATTCCTATCT TTA AGATAGGAATGATTTA TTTGTATTTTTATAA TERM 1060 984985 - 985019 + F 100 -19 -4.60808 | opp_overlap 984985 984989 985016, overlap 984980 TACGCAAGGATAAAA TAAATCATTCCTATCT TTA AGATAGGAATGATTTA TTTGTATTTTTATAA TERM 1061 985015 - 984989 - f 100 -15.4 -4.82863 | opp_overlap 984985 984980, overlap 984985 CAAGGATAAAATAAA TCATTCCTATCT TTA AGATAGGAATGA TTTATTTGTATTTTT CJE1049 985084 - 985197 + | hypothetical protein CJE1050 985215 - 985391 + | hypothetical protein CJE1051 985501 - 985388 - | hypothetical protein CJE1052 985554 - 986084 + | hypothetical protein CJE1053 986086 - 986409 + | hypothetical protein TERM 1062 986690 - 986718 + G 83 -9.7 -3.65581 | opp_overlap 986692, overlap 986692 986699 TGCTCAAGATGATAA AATCCAAAAGGTT AAA AGCCTTTTGGATC TTGTTAAAAATTAAT TERM 1063 986692 - 986716 + G 100 -12.3 -3.40498 | opp_overlap 986692, overlap 986690 986699 CTCAAGATGATAAAA TCCAAAAGGTT AAA AGCCTTTTGGA TCTTGTTAAAAATTA TERM 1064 986716 - 986692 - g 100 -10.1 -4.55023 | opp_overlap 986692 986690 986699 CTCAAGATGATAAAA TCCAAAAGGTT AAA AGCCTTTTGGA TCTTGTTAAAAATTA CJE1054 986550 - 986732 + | hypothetical protein TERM 1065 986755 - 986743 - T 73 -3.5 -5.28831 | overlap 986749 ATTAATAAAACAAAA TTTAA AGA TTAAA AATCAAAAAAGATTG TERM 1066 986780 - 986766 - T 100 -7.2 -5.54079 | TTAAAAATCAAAAAA GATTGA TAA TCAATC AAGCAAATACAAAAA CJE1055 986875 - 986744 - | hypothetical protein TERM 1067 987379 - 987369 - H 73 -4 -5.33785 | AACGATTACAAAAAA GAAA GTA TTTC AGTTCAAGACTTACA TERM 1068 987500 - 987510 + H 74 -6.8 -4.20531 | opp_overlap 987499 987500 AATTCAAATCAATAT CACC TTA GGTG TTTTAGGTAAATATG TERM 1069 988802 - 988772 - H 85 -8.5 -4.39426 | opp_overlap 988765 TATATTGCCATAAAA GCTTTTAATGTTA TAATT TAGCATTAAAAGC AAATGTCAAGGATAA CJE1058 988820 - 989695 + | methyltransferase, putative CJE1059 989768 - 990346 + | hypothetical protein CJE1060 990520 - 990347 - | putative lipoprotein CJE1061 991056 - 990529 - | thermonuclease family protein TERM 1070 991376 - 991360 - g 72 -5.1 -4.71828 | AGTTTATGAAGAAAA TGGCTTT TTA AGAGCCA AAAATTCAAGTCTTG pepD 991124 - 992392 + | aminoacyl-histidine dipeptidase cjaB 993622 - 992375 - | transport protein CjaB TERM 1071 992438 - 992419 - G 81 -7.2 -4.56597 | TGCTTCTTGCAAAAA CGCGTTTT AACA AAAACACG CAAAGCAAGGAACAA TERM 1072 992928 - 992940 + g 76 -6.3 -4.62471 | opp_overlap 992926 992928 AAACAAACAAGCATA CTCAT TTT ATGAG TTTTTAAAGCTTCGA TERM 1073 993074 - 993056 - G 75 -4.6 -5.15117 | TAAAATTCCAAAAAA TCCTCCTA TGA TAAAAGGA ATTCTCCAAGCATAG TERM 1074 993664 - 993640 - R 70 -7.2 -3.53031 | opp_overlap 993642 993646, overlap 993642 993646 TTTATCCTAAATCAA TATAAAGGGC AAAAA GCCCTTTATT AAATTTTTCCACCTT TERM 1075 993662 - 993642 - R 80 -9.8 -3.33865 | opp_overlap 993642 993646, overlap 993640 993646 TATCCTAAATCAATA TAAAGGGC AAAAA GCCCTTTA TTAAATTTTTCCACC TERM 1076 993642 - 993662 + r 80 -9.8 -3.45031 | opp_overlap 993640 993642 993646, overlap 993646 TATCCTAAATCAATA TAAAGGGC AAAAA GCCCTTTA TTAAATTTTTCCACC TERM 1077 993658 - 993646 - R 72 -6.2 -4.31 | opp_overlap 993646 993642, overlap 993642 993640 CTAAATCAATATAAA GGGC AAAAA GCCC TTTATTAAATTTTTC TERM 1078 993646 - 993658 + r 72 -6.2 -4.35017 | opp_overlap 993642 993640 993646, overlap 993642 CTAAATCAATATAAA GGGC AAAAA GCCC TTTATTAAATTTTTC CJE1064 994502 - 993663 - | surface antigen, CjaA TERM 1079 994677 - 994701 + H 78 -10.3 -2.75708 | overlap 994676 994675 TGTTTAAATTTTAAG TAAAAAAAGAT ATA ATCTTTTTTTA AATTTTTTAAGGAGA jlpA 994722 - 995840 + | surface-exposed lipoprotein TERM 1080 995902 - 995868 - f 77 -6 -4.7657 | gap 1, opp_overlap 995868, overlap 995859 TAAAAACTTCAAAAA CATTAAAAGCAA-GA TTAAAT TCTTTGCTCTTAATG TTTTCATAACATTAA CJE1066 995932 - 996672 + | hypothetical protein hipO 997827 - 996676 - | hippurate hydrolase TERM 1081 997549 - 997567 + g 71 -6.8 -4.02253 | CATTACATTTTCTTT TTTGCTTT TAT AAGGCAAA TTTGTGCATTCTTGC CJE1068 998440 - 997829 - | hypothetical protein TERM 1082 997946 - 997918 - G 100 -9.7 -4.59653 | opp_overlap 997923, overlap 997923 997935 AAGCAAAAATATAAA CAAAACCCAAAGT AAA ACTATGGGTTTTA TCAACACTCCAAGAT TERM 1083 997941 - 997923 - G 86 -7.4 -5.15682 | opp_overlap 997923, overlap 997918 997935 AAAATATAAACAAAA CCCAAAGT AAA ACTATGGG TTTTATCAACACTCC TERM 1084 997923 - 997941 + g 79 -7.4 -4.37886 | opp_overlap 997923 997918 997935 AAAATATAAACAAAA CCCAAAGT AAA ACTATGGG TTTTATCAACACTCC TERM 1085 998516 - 998526 + H 78 -2.6 -5.82281 | CTTTAATTATTTTTT TAAT TTA ATTA TTTTTTTATATATTT CJE1069 998544 - 998882 + | hypothetical protein CJE1070 999646 - 998885 - | hypothetical protein CJE1071 1000908 - 999643 - | iron-sulfur cluster-binding domain-containing protein TERM 1086 1000267 - 1000252 - G 76 -5.4 -5.03715 | ATCACCCGTAAAAAA TTGCGG CGCT CCACAA CACACTTGTTCTTTC hemN 1002265 - 1000910 - | coproporphyrinogen III oxidase CJE1073 1002743 - 1002252 - | hypothetical protein argF 1003660 - 1002740 - | ornithine carbamoyltransferase hemB 1004640 - 1003657 - | delta-aminolevulinic acid dehydratase TERM 1087 1005062 - 1005036 - g 75 -7.4 -4.11623 | overlap 1005026 TACGATTAAAGCAAA TCATCAGCTT GGCTTTA AAGCCGATGA GAGAACTTATGAAAT ribA 1004698 - 1005258 + | GTP cyclohydrolase II gidB 1005259 - 1005825 + | methyltransferase GidB TERM 1088 1005822 - 1005837 + T 100 -9 -5.22006 | opp_overlap 1005822 ATATTGTATTTTAAA GTAGCC CTAA GGCTAC TTTTTATTCTGCTAG TERM 1089 1005837 - 1005822 - T 79 -9 -3.60805 | opp_overlap 1005822 ATATTGTATTTTAAA GTAGCC CTAA GGCTAC TTTTTATTCTGCTAG CJE1078 1006413 - 1005841 - | hypothetical protein TERM 1090 1006014 - 1006025 + g 82 -4.4 -5.64274 | opp_overlap 1006014 TGGTATAAGTTAAAG GTAC AATA GTAC TTTTTTTATCCATAG TERM 1091 1006498 - 1006482 - R 72 -3.1 -5.28831 | overlap 1006492 ATTAATAAAATAAAA TTTTCTA AAA TAAAAAA TAATTTTTATTACCA CJE1079 1007605 - 1006508 - | hypothetical protein TERM 1092 1007470 - 1007460 - G 76 -6.8 -4.47259 | ATGATAATAGCAAAA GCAG TCG CTGC TAAATGAGTGGTATC TERM 1093 1007679 - 1007689 + H 81 -2.6 -6.11243 | opp_overlap 1007668, overlap 1007668 TATATTATTTTAATT TTTA TAA TAAA TTTTTTTTATTAAAT TERM 1094 1008478 - 1008465 - g 70 -3.9 -5.07941 | AAAAGCATAGAAAAA GAATT AAAA AATTC AACACTTTATGAAAT CJE1080 1007718 - 1008599 + | LysR family transcriptional regulator rpoD 1008679 - 1010547 + | RNA polymerase sigma factor RpoD sixA 1011075 - 1010563 - | phosphohistidine phosphatase SixA CJE1083 1011590 - 1011072 - | rhomboid family protein TERM 1095 1011331 - 1011320 - G 78 -4.4 -5.46276 | AATACACATAAAAAA CACT TAAA AGTG AGCACAACAATCCGC CJE1084 1011689 - 1012105 + | hypothetical protein CJE1085 1013729 - 1012113 - | cell division protein FtsH, putative TERM 1096 1013467 - 1013457 - G 86 -3.2 -5.85244 | AAGTAAAACAAAAAA CACC CAA AGTG TATTATCTTTTTTAA CJE1086 1014983 - 1013733 - | MiaB-like tRNA modifying enzyme TERM 1097 1013893 - 1013907 + g 95 -7.2 -5.86965 | opp_overlap 1013892 TTTTCTACCAAAACT TCAAGT GAA ACTTGA TTTTTTTTCCTAAAT TERM 1098 1014958 - 1014971 + g 73 -3.9 -5.30616 | opp_overlap 1014958 GTGCGACATCCAAAG GTTTT AAAA AAAAC TTTTTCTTTCAATCC TERM 1099 1014997 - 1015018 + r 72 -8.9 -2.63549 | overlap 1014996 1014993 1014999 AATCCTTATTCCTTG CATGAAAAT ACAT ATTTTCATG ATGTTGTTCAAAATG CJE1087 1016551 - 1014980 - | mechanosensitive ion channel family protein TERM 1100 1015763 - 1015750 - G 72 -2.5 -5.4593 | opp_overlap 1015755 1015761, overlap 1015755 GCAAAATAAGAAAAA TAATA TTTA TATTA ATAAAATTAATAATC TERM 1101 1015870 - 1015845 - G 73 -5.5 -4.6821 | AATTTCAACATAAAA GCTATAGCTAT AACA ATAACAATAGC AACAAGTATATTTAC TERM 1102 1016016 - 1016032 + g 76 -9.5 -3.17325 | overlap 1016019 TCCAGCTTTTTATCC GAAGCTT TTA AAGCTTC TATATTCTCAACACT aroB 1017603 - 1016548 - | 3-dehydroquinate synthase CJE1089 1019049 - 1017649 - | TrkA domain-containing protein TERM 1103 1019012 - 1018988 - G 91 -10.1 -4.08064 | opp_overlap 1018992, overlap 1018975 1018992 AAGCCTTTTTCAAAA CAAAGCCTTTC TAA GAAATGCTTTG CTAAAATACCATCTA TERM 1104 1019008 - 1018992 - G 70 -5.1 -4.64861 | opp_overlap 1018992, overlap 1018975 1018988 CTTTTTCAAAACAAA GCCTTTC TAA GAAATGC TTTGCTAAAATACCA tgt 1019079 - 1020200 + | queuine tRNA-ribosyltransferase TERM 1105 1020361 - 1020349 - g 70 -6.3 -4.11869 | opp_overlap 1020348 GAAAAAATTTATAAA CTTCA AAA TGAAG AATTTAAGCTTTCTA CJE1091 1020202 - 1020969 + | hypothetical protein TERM 1106 1020989 - 1020962 - f 100 -9.4 -5.08015 | opp_overlap 1020967 1020970, overlap 1020967 AAGCTAAAAAACAAA CAAAATAAGCAA AATT TTGCTTATTTTA AGAATATTTATATAT TERM 1107 1020967 - 1020984 + F 73 -7.1 -4.15543 | opp_overlap 1020962 1020967, overlap 1020970 AAAAAACAAACAAAA TAAGCAA AATT TTGCTTA TTTTAAGAATATTTA TERM 1108 1020984 - 1020967 - f 95 -7.1 -5.3472 | opp_overlap 1020967 1020970, overlap 1020962 AAAAAACAAACAAAA TAAGCAA AATT TTGCTTA TTTTAAGAATATTTA CJE1092 1021288 - 1021395 + | hypothetical protein TERM 1109 1021553 - 1021537 - g 76 -5.1 -5.15969 | TGTTAACTGAAAAAA TTGATCC CAA GGAACAA ATTCAAAAAGAAGAT CJE1093 1021521 - 1021871 + | hypothetical protein TERM 1110 1021889 - 1021869 - T 70 -8.4 -2.67501 | opp_overlap 1021871 1021873, overlap 1021871 1021873 1021885 GAAAGATTCACAGCA TAGACTTC AAAAA GAAGTCTA TGTAAATAATTAATT TERM 1111 1021896 - 1021920 + T 74 -8.9 -3.05715 | opp_overlap 1021885 1021896 1021899, overlap 1021899 AGAAGTCTATGTAAA TAATTAATTTT AGA AAAATTAATTA TTCAATAACGCAGTT TERM 1112 1021920 - 1021896 - T 81 -8.9 -3.67141 | opp_overlap 1021896 1021899, overlap 1021885 1021899 AGAAGTCTATGTAAA TAATTAATTTT AGA AAAATTAATTA TTCAATAACGCAGTT CJE1094 1022585 - 1021914 - | phage integrase family site specific recombinase TERM 1113 1022177 - 1022187 + g 70 -4 -4.89521 | GCATTATGTAATCAC TATC TTG GATA TTTTCTTTAAAATAT CJE1095 1022851 - 1022591 - | hypothetical protein TERM 1114 1022872 - 1022898 + H 100 -11.2 -4.60886 | opp_overlap 1022877 1022883 TTACATCCTTTTTTT TATAACATAATT AAC AATTATGTTATA TTTATTTGCTTGTGT TERM 1115 1023137 - 1023122 - g 76 -2.6 -5.54264 | AAATATTCAAAAAAA TGAAAT ATTA ATTCCA AAAAGAGTATTATTT TERM 1116 1023173 - 1023163 - g 72 -4 -5.15634 | TATTTGATGAAAAAA CATT AAA AATG ATAGAAATGATGATT TERM 1117 1023253 - 1023238 - g 71 -4.8 -4.71401 | AAGAAAATGAGAAAA TTAATC AAAT GATTAA GCTTGCTATAGAAAA CJE1096 1023081 - 1023311 + | hypothetical protein CJE1097 1023675 - 1023559 - | hypothetical protein CJE1098 1024006 - 1023863 - | hypothetical protein CJE1099 1024181 - 1024050 - | hypothetical protein CJE1100 1024489 - 1024202 - | death-on-curing family protein CJE1101 1024635 - 1024486 - | hypothetical protein CJE1102 1024907 - 1025134 + | hypothetical protein CJE1103 1025103 - 1025402 + | hypothetical protein CJE1104 1025481 - 1025648 + | hypothetical protein CJE1105 1026223 - 1025669 - | hypothetical protein CJE1106 1026596 - 1026192 - | hypothetical protein CJE1107 1028367 - 1026778 - | TraG-like protein CJE1108 1028567 - 1028406 - | hypothetical protein TERM 1118 1028552 - 1028530 - G 83 -7.6 -4.58466 | opp_overlap 1028530 1028536, overlap 1028534 GGTATAATTATAAAA GGTAGATGCC AAA GGCGGCTACC TTTGGCATTAATCAT TERM 1119 1028530 - 1028552 + g 83 -9.8 -3.68244 | opp_overlap 1028530 1028534, overlap 1028536 GGTATAATTATAAAA GGTAGATGCC AAA GGCGGCTACC TTTGGCATTAATCAT TERM 1120 1028561 - 1028534 - G 74 -9.2 -2.82606 | opp_overlap 1028530 1028536 1028560, overlap 1028530 TAATTATAAAAGGTA GATGCCAAAGGC GGCT ACCTTTGGCATT AATCATAACCTAGAA TERM 1121 1028536 - 1028559 + g 87 -11.1 -3.21747 | opp_overlap 1028530 1028534, overlap 1028530 ATTATAAAAGGTAGA TGCCAAAGG CGGCTA CCTTTGGCA TTAATCATAACCTAG TERM 1122 1028656 - 1028671 + r 87 -10.4 -3.54543 | overlap 1028669 GGCTTATTGAGTATC CCCTGC TTTT GCAGGG TTTAGAACAATCCCT CJE1109 1029615 - 1028815 - | hypothetical protein TERM 1123 1028878 - 1028890 + g 72 -2.7 -5.35354 | overlap 1028867 TTTATCAAAGTCTTT TGAGT TAT ATTCA TTTTTTGATTGTATA TERM 1124 1029044 - 1029058 + g 74 -2.2 -5.53079 | GAAGAGTGAATACTA TGAAAT AAA ATTTTA TTTTTTATATCTTTT CJE1110 1030955 - 1029669 - | hypothetical protein TERM 1125 1030666 - 1030679 + g 85 -8.1 -4.43221 | overlap 1030654 1030675 1030677 TCTGCTTTAGTCCAA GGAGC TATA GCTCC TTTTATAGGATCTTT CJE1111 1032317 - 1031031 - | hypothetical protein CJE1112 1033065 - 1032328 - | hypothetical protein CJE1113 1035799 - 1033187 - | hypothetical protein TERM 1126 1034644 - 1034660 + g 93 -4.5 -6.0427 | TACCCATTTTGGTTG TATTGAT TTG ATCAGTA TTTTTTTTATCTAAT TERM 1127 1034920 - 1034896 - G 95 -10.3 -4.21812 | CTTCATCTAAAATAA CTTTATAAAAA CTA TTTTTATAAAG ACTAATAGAAGGTAC CJE1114 1037226 - 1035796 - | hypothetical protein TERM 1128 1036752 - 1036763 + g 80 -2.2 -5.77677 | TAGCTTGTTTTTTAT CTAC TTGT GTGG TTTTTTGTTCTTTTA CJE1115 1038736 - 1037234 - | hypothetical protein CJE1116 1039051 - 1038746 - | hypothetical protein TERM 1129 1038893 - 1038869 - G 72 -4.3 -5.03994 | TGCTATATACAAAAA CTTTATTTCAC AAA GAGAAAAAAAG CGATAAAGCATTAAT CJE1117 1039593 - 1039102 - | hypothetical protein TERM 1130 1039687 - 1039708 + r 77 -5.3 -4.91987 | gap 1 TAAATTTACCTTTAT TTCTCTATAG CCT CTA-AGAGAA TTTTCTTCTTGAATT TERM 1131 1039965 - 1039993 + r 73 -4 -5.28176 | opp_overlap 1039955 AAATAGCAACAAATA GCAACAAATATA TTTTT TGTATTTCTTGC TTTTTTATAAATCAA CJE1118 1040458 - 1040222 - | hypothetical protein CJE1119 1040538 - 1040756 + | hypothetical protein TERM 1132 1040832 - 1040842 + G 72 -4 -5.1287 | TTTTGGATCTTCATA GTAT TAC ATAC TTTTTTGGCTCTGAA CJE1120 1040819 - 1040950 + | hypothetical protein TERM 1133 1041010 - 1040975 - T 88 -12.4 -2.52834 | opp_overlap 1040967 1040975 1040978 1040981, overlap 1040978 1040981 TATTCTATTATTAAC TAATAATATATAAAAA ATAT TTTTTATATATTATTA TATATTATGATTACA TERM 1134 1040975 - 1041010 + T 91 -12.4 -3.2302 | opp_overlap 1040975 1040978 1040981, overlap 1040967 1040978 1040981 TATTCTATTATTAAC TAATAATATATAAAAA ATAT TTTTTATATATTATTA TATATTATGATTACA TERM 1135 1040978 - 1041007 + T 83 -9.7 -3.74462 | opp_overlap 1040975 1040978 1040981, overlap 1040967 1040975 1040981 TCTATTATTAACTAA TAATATATAAAAA ATAT TTTTTATATATTA TTATATATTATGATT TERM 1136 1041007 - 1040978 - T 80 -9.7 -3.41693 | opp_overlap 1040967 1040978 1040975 1040981, overlap 1040975 1040981 TCTATTATTAACTAA TAATATATAAAAA ATAT TTTTTATATATTA TTATATATTATGATT TERM 1137 1040981 - 1041004 + T 71 -7 -3.98649 | opp_overlap 1040978 1040975 1040981, overlap 1040978 1040975 ATTATTAACTAATAA TATATAAAAA ATAT TTTTTATATA TTATTATATATTATG TERM 1138 1041004 - 1040981 - T 71 -7 -3.84246 | opp_overlap 1040981 1040978 1040975, overlap 1040978 1040975 ATTATTAACTAATAA TATATAAAAA ATAT TTTTTATATA TTATTATATATTATG TERM 1139 1041476 - 1041513 + T 78 -4.3 -5.41143 | gap 1 AATTCTTTGCAATAT TCTAGGTTTTTTGCACCT ATT AGGTG-AAAACATCCAGA TTTTTTTGCAGAATA TERM 1140 1042091 - 1042107 + T 76 -6.7 -4.45807 | opp_overlap 1042087 1042086 GTAGTTAAAACTTCA TTTTCAT CAA ATGAAAA TTCTTTATTTTGGTG TERM 1141 1042344 - 1042328 - T 79 -7.9 -3.89336 | opp_overlap 1042327 1042328 GCAATTAAATTCAAA GGGCTTC CTA GTAGCCC ACTTTTTTTATATTA CJE1122 1042590 - 1042357 - | hypothetical protein CJE1123 1042874 - 1042587 - | hypothetical protein CJE1124 1043564 - 1043022 - | hypothetical protein CJE1125 1043925 - 1043806 - | hypothetical protein CJE1126 1044208 - 1043942 - | hypothetical protein TERM 1142 1044120 - 1044136 + g 71 -6.6 -3.95893 | ACGGTTTTTCTTCCA GCTGAT TTTTT ATCAGC TTTACTATATGTTTT TERM 1143 1044184 - 1044196 + g 85 -2.7 -5.87688 | AGTTTAAAGCTTCTG CTATT GTA AATGG TTTTTTTTCCATTAT CJE1127 1044771 - 1044211 - | hypothetical protein TERM 1144 1044832 - 1044856 + r 78 -6.7 -4.73341 | opp_overlap 1044802 1044817 1044832 1044838, overlap 1044838 TTTATTAATAAATAA TAAAAATAAAT AAT ATTTATTTTTG TTTCTTTGATTTTTT CJE1128 1044939 - 1044811 - | hypothetical protein TERM 1145 1044850 - 1044838 - G 76 -3.5 -5.44198 | opp_overlap 1044832 1044838, overlap 1044832 AATAAATAATAAAAA TAAAT AAT ATTTA TTTTTGTTTCTTTGA TERM 1146 1044838 - 1044850 + g 81 -3.5 -5.5454 | opp_overlap 1044838 1044832, overlap 1044832 AATAAATAATAAAAA TAAAT AAT ATTTA TTTTTGTTTCTTTGA TERM 1147 1045064 - 1045046 - R 82 -3.3 -5.83211 | opp_overlap 1045046 1045063, overlap 1045039 1045063 TATTAAAATAAAAAA TAATTAT TTCTT ATAATTA TTTTGTGAAATATTA TERM 1148 1045275 - 1045265 - R 70 -4 -5.1287 | TTCAGAGCCAAAAAA GTAT GTA ATAC TATGAAGATCCAAAA CJE1129 1045557 - 1045351 - | hypothetical protein CJE1130 1045630 - 1046097 + | hypothetical protein CJE1131 1046112 - 1046321 + | hypothetical protein CJE1132 1046363 - 1046788 + | hypothetical protein TERM 1149 1047604 - 1047590 - g 81 -5.8 -5.19275 | overlap 1047596 ATTTAGAAAAGAAAA TACAAA CTT TTTGTA AAAAAGATATAGAAA TERM 1150 1047610 - 1047596 - g 73 -5.8 -4.61807 | overlap 1047590 AAAAGAAAATACAAA CTTTTT GTA AAAAAG ATATAGAAAATCAAA CJE1133 1046785 - 1047834 + | hypothetical protein CJE1134 1047837 - 1048079 + | hypothetical protein TERM 1151 1048477 - 1048466 - g 80 -2.2 -5.77677 | TAAAAGAACAAAAAA CCAC ACAA GTAG ATAAAAAACAAGCTA CJE1135 1048069 - 1049937 + | hypothetical protein CJE1136 1049927 - 1050673 + | hypothetical protein TERM 1152 1052210 - 1052195 - g 88 -4 -5.79526 | ATACTTCAAAAAAAA CTTATG ACAG CACAAG AGATTATAGCGAATA TERM 1153 1052639 - 1052655 + G 75 -4.5 -5.02074 | opp_overlap 1052639 1052653, overlap 1052638 1052639 CTCATCAATATTTAA CTTTTTT GAA AAAAGAG TTTTTTGAAAAATCG TERM 1154 1053039 - 1053029 - g 81 -2.6 -5.74122 | CATTAGATAAAAAAA TAAT CAA ATTA AAGCAAATGTATCAT TERM 1155 1053526 - 1053494 - g 71 -7.2 -3.77278 | overlap 1053513 TAGAAAAAGAATTAA CTCATACTAAAATC CAAAT GATTTTAGCACAAG AGATAAAATCCAATT CJE1137 1050718 - 1054650 + | hypothetical protein TERM 1156 1054958 - 1054945 - g 85 -8.1 -4.43221 | overlap 1054935 1054933 1054948 AAAGATCCTATAAAA GGAGC TATA GCTCC TTGGACTAAAGCAGA CJE1138 1054669 - 1055937 + | hypothetical protein TERM 1157 1055946 - 1055932 - T 93 -8.6 -4.75289 | GAGCATAATATAAAA GAGTGA AAA TCACTC AAAATCTTTAATATA CJE1139 1056840 - 1055941 - | hypothetical protein TERM 1158 1056274 - 1056295 + g 74 -2.3 -5.57054 | overlap 1056276 ACTTTTTAAAACATT TTCATATTC TAAT GAATTTGGA TTTTTTTGAATTATT TERM 1159 1057249 - 1057219 - H 75 -9.2 -3.29211 | opp_overlap 1057226, overlap 1057226 CAATTTTAAACTTAA GGATAAATTATCAA TTA TTGAAAATTTACCC CATCAAATTTTAATT TERM 1160 1057598 - 1057585 - H 83 -3.9 -5.85178 | AATACGCAAAAAAAA TATAC AATA GTATA TATGAAACTATGTGA TERM 1161 1058208 - 1058220 + G 74 -6.3 -4.46112 | opp_overlap 1058208 TTTAAGCTTCAATCA GTCTT GAT AAGAC TTTCTTTAAATAAAG CJE1141 1057767 - 1059182 + | hypothetical protein CJE1142 1059374 - 1060270 + | hypothetical protein CJE1143 1060350 - 1061093 + | hypothetical protein CJE1144 1061080 - 1061184 + | hypothetical protein CJE1145 1061185 - 1061529 + | hypothetical protein TERM 1162 1062583 - 1062555 - g 90 -3.9 -6.25578 | opp_overlap 1062562, overlap 1062556 ATCAAACAAAAAAAA CTTTAATGCTTAC AAA GAAAGCTTTAAAA TATAAGGAATAAATA CJE1146 1061519 - 1062595 + | hypothetical protein TERM 1163 1063411 - 1063427 + G 72 -4.5 -4.97666 | opp_overlap 1063411 1063412, overlap 1063412 AACACAATAAAAGAA TTAGAAT TTG ATTCTAG TTTTTATACTATCTT CJE1147 1062598 - 1063611 + | hypothetical protein TERM 1164 1064343 - 1064353 + G 75 -4 -5.22104 | CAAAATTGATTTTAC TTCT AAT AGAA TTTTATTATTTTTTA CJE1148 1063657 - 1064526 + | hypothetical protein CJE1149 1064519 - 1064635 + | hypothetical protein TERM 1165 1064867 - 1064904 + GF 77 -7.3 -4.35524 | opp_overlap 1064869, overlap 1064869 AGAACTATTAAATTA TATGCATAATTTTAAAA AAGA TTTTAAATTTATGCAAA TTTTAGGTTTAGACA TERM 1166 1064869 - 1064902 + GF 78 -9.9 -2.52017 | opp_overlap 1064869, overlap 1064867 AACTATTAAATTATA TGCATAATTTTAAAA AAGA TTTTAAATTTATGCA AATTTTAGGTTTAGA TERM 1167 1064902 - 1064869 - gf 79 -9.9 -3.04817 | opp_overlap 1064867 1064869 AACTATTAAATTATA TGCATAATTTTAAAA AAGA TTTTAAATTTATGCA AATTTTAGGTTTAGA CJE1150 1064610 - 1065374 + | hypothetical protein TERM 1168 1066174 - 1066159 - g 70 -6.2 -4.03888 | GATTTACAAGAACAA GATCAA ATCA TTGATC AAGAAGAACAAAAAT TERM 1169 1066899 - 1066881 - g 75 -4 -5.30448 | AAATAAAGACAAAAA TAAAAAAA TTA TCTTTTTA AATAATGCTTCATCG TERM 1170 1067239 - 1067225 - g 70 -5.8 -4.35483 | CTTTATTAGAAGAAA GTTTAA ATA TTAAAC TAGAACCCAAAGAGC TERM 1171 1067279 - 1067267 - g 75 -4.9 -5.05153 | AGCTTAAAAAAGAAA TTGTT TAC AACAA TACAAGTTTTAACAA CJE1151 1065358 - 1068297 + | hypothetical protein TERM 1172 1069037 - 1069025 - g 82 -6.3 -5.24129 | opp_overlap 1069025 GGCTTTGAGAAAAAA CTTCA AAA TGAAG TTGTTGATATCAACA CJE1152 1068290 - 1069546 + | hypothetical protein TERM 1173 1070065 - 1070043 - g 86 -5 -5.59534 | overlap 1070046 AATGATAATAAAAAA TTATATTGAT GCA ATCAATAAAA ACCATGGCATAAAAC CJE1153 1069546 - 1070808 + | hypothetical protein CJE1154 1070821 - 1071033 + | hypothetical protein TERM 1174 1071662 - 1071677 + G 85 -10.4 -3.54543 | overlap 1071675 GGCTTATTGAGTATC CCCTGC TTTT GCAGGG TTTAGAACAATCCCT CJE1155 1071640 - 1071756 + | hypothetical protein CJE1156 1072339 - 1071875 - | hypothetical protein TERM 1175 1072311 - 1072297 - G 72 -4.2 -5.16681 | CTAAAAACAATAAAA GCGCTA AAG CAGCAC AAAAAATAACCAAAA CJE1157 1075585 - 1072340 - | CcmF/CcyK/CcsA family cytochrome c biogenesis protein livF 1076298 - 1075603 - | high affinity branched-chain amino acid ABC transporter, ATP-binding protein livG 1077055 - 1076285 - | high affinity branched-chain amino acid ABC transporter, ATP-binding protein TERM 1176 1076791 - 1076766 - G 83 -9.9 -3.61015 | overlap 1076764 AAACCAATAAGAACA TTTTCAAGCAC ATTC ATGCTTGAAAA AAGCCTAATATTTTG livM 1078104 - 1077052 - | high affinity branched-chain amino acid ABC transporter, permease protein TERM 1177 1078067 - 1078053 - G 88 -5.8 -5.56372 | AAATGAAAATAAAAA TAATTG AAG CAATTA AAAAGATTAAATGTG livH 1079000 - 1078104 - | high affinity branched-chain amino acid ABC transporter, permease protein CJE1162 1080128 - 1079019 - | high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein CJE1163 1081265 - 1080150 - | high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein CJE1164 1081730 - 1081296 - | cytochrome c family protein TERM 1178 1081334 - 1081352 + g 71 -6 -4.41494 | overlap 1081336 TTGTTTTTTGCGCAG GTTCTTCT TCA AGAAGATC TTTTACTTGCAAATC TERM 1179 1081336 - 1081350 + g 71 -7.2 -3.8125 | overlap 1081334 GTTTTTTGCGCAGGT TCTTCT TCA AGAAGA TCTTTTACTTGCAAA CJE1165 1081930 - 1081739 - | porin domain-containing protein TERM 1180 1081905 - 1081893 - G 77 -4.9 -5.26119 | GCTGCAAAAACAAAA TGATT TAA AATCA TACCAATTAAAAATA CJE1166 1082489 - 1081983 - | hypothetical protein asd 1083529 - 1082498 - | aspartate-semialdehyde dehydrogenase CJE1168 1084830 - 1083529 - | sigma-54 dependent DNA-binding response regulator CJE1169 1085336 - 1084887 - | hypothetical protein CJE1170 1085827 - 1085312 - | putative lipoprotein gyrA 1088482 - 1085894 - | DNA gyrase subunit A ctsW 1089098 - 1088523 - | transformation system protein TERM 1181 1089082 - 1089065 - G 89 -9.1 -4.27483 | opp_overlap 1089064 ATTCACAAAAGCAAA GCAGAGC AAAA GCTCCGC AATTTATACACCTCA mapA 1089739 - 1089095 - | outer membrane liproprotein MapA TERM 1182 1089784 - 1089768 - R 73 -6.7 -4.18697 | AAAATTATTTTAAAA TTGTATT AAA AATACAA GCAAATTTCAAGCCA lepA 1091612 - 1089816 - | GTP-binding protein LepA TERM 1183 1089902 - 1089915 + g 74 -5.3 -4.98911 | TTTTACCTTCTTTTT GCTTT TCTA AAAGC TTTCTTTTTCTAGTA CJE1176 1093009 - 1093749 + | hypothetical protein CJE1177 1093752 - 1096769 + | AcrB/AcrD/AcrF family protein TERM 1184 1096761 - 1096787 + T 100 -6.8 -5.52909 | opp_overlap 1096761 TATGAGAGAGAAAAA TTAAATTAACCA AAA TGATTAATTTAA TTTTTTTAAGTATTA TERM 1185 1096787 - 1096761 - T 100 -9 -5.05601 | opp_overlap 1096761 TATGAGAGAGAAAAA TTAAATTAACCA AAA TGATTAATTTAA TTTTTTTAAGTATTA CJE1178 1097599 - 1096793 - | adenylosuccinate lyase TERM 1186 1097490 - 1097472 - G 95 -7.6 -5.40072 | opp_overlap 1097457 1097471 TTTTCTTCAAAAAAA GAAAAAAT TTT ATTTTTTC GTCCTATGACCTTTG CJE1179 1098319 - 1097600 - | arginyl-tRNA-protein transferase CJE1180 1098570 - 1098319 - | hypothetical protein accC-1 1100019 - 1098574 - | acetyl-CoA carboxylase CJE1182 1100159 - 1101322 + | cell cycle protein FtsW TERM 1187 1101627 - 1101639 + G 72 -7.7 -3.68071 | opp_overlap 1101626, overlap 1101626 1101635 TGTAGGTGGATACAG TGCAG CTC CTGCA TCTTTTGCGGCTTTA murG 1101319 - 1102347 + | N-acetylglucosaminyl transferase CJE1184 1103481 - 1102318 - | hypothetical protein CJE1185 1104340 - 1103489 - | hypothetical protein CJE1186 1105293 - 1104403 - | AraC family transcriptional regulator CJE1187 1105895 - 1105290 - | thiamine-phosphate pyrophosphorylase, putative TERM 1188 1105860 - 1105879 + g 81 -3.6 -5.60993 | gap 1, overlap 1105862 1105864 TATTTCTACACATTT TCTATCGCT TAT GGCGAT-GA TTTTTTTATCCCACA thiH 1107030 - 1105885 - | thiamine biosynthesis protein ThiH TERM 1189 1106852 - 1106878 + g 72 -8.8 -3.0127 | overlap 1106852 ATGAAATCTTCTGCT GCACTTGAAAGC AAG GCTTTTAAATGC TCTATACTTAAATGC thiG 1107809 - 1107033 - | thiazole synthase thiF 1108615 - 1107812 - | thiamine biosynthesis protein ThiF thiS 1108803 - 1108612 - | thiamine biosynthesis protein ThiS dapE 1109910 - 1108813 - | succinyl-diaminopimelate desuccinylase CJE1193 1110514 - 1109915 - | amino acid transporter LysE CJE1194 1111208 - 1110507 - | NAD-dependent deacetylase CJE1195 1115282 - 1111251 - | type II restriction-modification enzyme mutS 1117498 - 1115291 - | recombination and DNA strand exchange inhibitor protein TERM 1190 1116362 - 1116348 - G 70 -5.8 -4.22524 | ATACCTAAAAGCAAA TTTTTC TTA GAAAAA AGTCTAGAAAAATGC CJE1197 1117841 - 1117491 - | hypothetical protein murC 1119129 - 1117834 - | UDP-N-acetylmuramate--L-alanine ligase TERM 1191 1118880 - 1118868 - G 71 -7.7 -3.53012 | opp_overlap 1118868 CCTCCTTGCGTGAAA GGCAT TTA ATGCC TAATTCTTTAGCGTG CJE1199 1120035 - 1119253 - | carbon-nitrogen family hydrolase CJE1200 1120201 - 1120028 - | exodeoxyribonuclease VII, small subunit, putative guaB 1121655 - 1120198 - | inositol-5-monophosphate dehydrogenase gatA 1123026 - 1121665 - | aspartyl/glutamyl-tRNA amidotransferase subunit A CJE1203 1123133 - 1123023 - | hypothetical protein ileS 1125880 - 1123127 - | isoleucyl-tRNA synthetase TERM 1192 1125736 - 1125749 + g 83 -6.7 -5.10516 | AGGTAAAACTTTTTT TCGCA TTTT TGCGA TTTTCTTTCATTTTT TERM 1193 1126192 - 1126211 + G 81 -9.4 -3.69323 | TTGCATTATGCGACT GTTGCTAA AATT TTAGCAAC TTTAAATGATGATAA CJE1205 1125979 - 1127067 + | competence/damage-inducible domain-containing protein TERM 1194 1127069 - 1127047 - f 76 -6.4 -4.67038 | opp_overlap 1127046 CTTTTAAAATTAAAA CCTGAAATTT TTG AAATTTAAGG GATTTAAAAATGAAA TERM 1195 1127131 - 1127116 - g 75 -4.8 -5.04987 | AAGACTTGGAAAAAA TTTATC CCTT GATAAA ACAATTAAGAAATAA TERM 1196 1127151 - 1127161 + G 70 -4 -5.00884 | opp_overlap 1127151 1127160 TTAAGAAATAACCTA TCTT TGA AAGA TTTTTTAGACAAAAT CJE1206 1127079 - 1127504 + | acetyltransferase TERM 1197 1128429 - 1128439 + G 75 -4 -5.23016 | TTAATTATCATCATT TCAA GAC TTGA TTTTTTAGATTATTT CJE1209 1128189 - 1128794 + | nitroreductase family protein TERM 1198 1128823 - 1128786 - f 100 -16.1 -4.15106 | opp_overlap 1128780 1128796 GATGAAGTTGTAAAA TTTATTTAAATTTTGCT TTTA AGCAAAATTTAAATAAA AATAAACTGATTCTT TERM 1199 1128960 - 1128973 + G 88 -3.1 -6.15536 | TTTTTAGAATGGTTT TAGCG CCTT TGCTA TTTTTTTTATTAATT pgsA 1128920 - 1129456 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CJE1211 1129453 - 1130559 + | membrane-associated zinc metalloprotease, putative TERM 1200 1130969 - 1130979 + G 72 -4 -5.05577 | AAAAAATACACAATC TTAC AAT GTAA TTTTTGCTTTACTTT CJE1212 1130552 - 1131418 + | hypothetical protein rpsF 1131505 - 1131882 + | 30S ribosomal protein S6 TERM 1201 1132212 - 1132192 - g 74 -8.3 -3.69618 | overlap 1132190 TTCAAGTTGAAAATA TGGAAATGC TTG GCAATTCCA ATGCTCCACAACAAG ssb 1131891 - 1132439 + | single-strand DNA-binding protein TERM 1202 1132617 - 1132603 - g 75 -4.3 -5.32944 | GGCACAAGCAAAAAA TACCA AGAAA TGGTA GAAGTTGCAATCAAA rpsR 1132450 - 1132710 + | 30S ribosomal protein S18 TERM 1203 1132740 - 1132720 - T 77 -8.4 -3.58533 | opp_overlap 1132720 CTATAATCTTTTAAA GCAAACTT GTAAA AAGTTTGC TTTCTTATACATTTA TERM 1204 1132720 - 1132740 + T 85 -8.4 -4.37211 | opp_overlap 1132720 CTATAATCTTTTAAA GCAAACTT GTAAA AAGTTTGC TTTCTTATACATTTA lon 1135145 - 1132770 - | ATP-dependent protease La TERM 1205 1133610 - 1133624 + g 75 -5.8 -4.74504 | opp_overlap 1133620 TGGAATTAAATATTT TTTCAT TAT ATGAAA TTTTTCACTTGGAGT TERM 1206 1134216 - 1134226 + g 70 -4 -5.00616 | CTTAATATCAAGTTT TTTC TTA GAAA TTTTTTCAAAAGGAA TERM 1207 1134308 - 1134323 + g 72 -2.6 -5.48163 | CTTGATGAATGCGTT CGAATT TTTC AATTTG TTTTTTGATTTCTTT CJE1217 1135809 - 1135162 - | putative lipoprotein TERM 1208 1135350 - 1135368 + g 73 -6 -4.53303 | overlap 1135352 ATTTTGTAAGCATTG TTTGAACC AAA GGTTCATA TTTTGTATAAGGATA TERM 1209 1135352 - 1135366 + g 82 -8.6 -3.87627 | overlap 1135350 TTTGTAAGCATTGTT TGAACC AAA GGTTCA TATTTTGTATAAGGA TERM 1210 1136059 - 1136085 + G 73 -3.8 -5.18643 | opp_overlap 1136064, overlap 1136055 1136064 AGTATTTGTAAGACT TAAAAGTCTTGA TGG TAAAGACTTTTC TTTTGTTTTAATTAA TERM 1211 1136064 - 1136080 + G 76 -3.7 -5.40279 | opp_overlap 1136064, overlap 1136055 1136059 TTGTAAGACTTAAAA GTCTTGA TGG TAAAGAC TTTTCTTTTGTTTTA CJE1218 1135970 - 1136359 + | flagellar assembly protein FliW TERM 1212 1136487 - 1136458 - g 70 -3.6 -5.05079 | overlap 1136444 1136459 1136479 AGAAGTATAGAAAAA CTTCAAGCCCTC GCCAAA GAAGGCTTTAAA ACCTTACTTTACAAA TERM 1213 1136956 - 1136936 - g 70 -6.2 -4.18018 | GCTCTTTATTTAAAA GCTCTAGT GCTTT ACTAGAAC ATGAACATCCAGCTA proC 1136359 - 1137090 + | pyrroline-5-carboxylate reductase ctsT 1137087 - 1137389 + | transformation system protein TERM 1214 1137576 - 1137557 - g 84 -6.6 -5.28983 | opp_overlap 1137555 1137557 1137561 CTTAAAATAGAAAAA TTAATACA AAAT TGTATTAA TATTACATTTTCACA TERM 1215 1138013 - 1137996 - g 75 -4.9 -5.10877 | ACAATAAATTAAAAA TTTGCCT AAAA AGACAAA CAAAACATTGCCTTG CJE1221 1137386 - 1138048 + | hypothetical protein CJE1222 1138045 - 1138497 + | hypothetical protein hemD 1139123 - 1138494 - | uroporphyrinogen-III synthase TERM 1216 1139079 - 1139057 - G 72 -2.8 -5.4588 | opp_overlap 1139060, overlap 1139060 TAAAATCATAAAAAA CAATCTCATT TAA AATAAGATTT TCCACCCCTTCAAAA TERM 1217 1139076 - 1139060 - G 71 -4.5 -4.75967 | opp_overlap 1139060, overlap 1139057 AATCATAAAAAACAA TCTCATT TAA AATAAGA TTTTCCACCCCTTCA thiE 1139733 - 1139101 - | thiamine-phosphate pyrophosphorylase thiD 1140535 - 1139723 - | phosphomethylpyrimidine kinase CJE1226 1141218 - 1140532 - | endonuclease III, putative CJE1227 1141976 - 1141215 - | hypothetical protein TERM 1218 1141840 - 1141856 + g 83 -2.3 -5.89947 | TGAATGAAATTTAAA GTATTTT CAT AAAGTGC TTTTTTTTGACTTTC mfd 1144914 - 1141978 - | transcription-repair coupling factor CJE1229 1145309 - 1144914 - | hypothetical protein CJE1230 1146148 - 1145246 - | M24/M37 family peptidase TERM 1219 1145860 - 1145844 - GR 72 -7.3 -3.66356 | opp_overlap 1145844 1145842, overlap 1145856 ACTTCTAAGCCCAAA GCCTCTT CAA AAGAAGC TATTTTATCTTCTAT folC 1147307 - 1146135 - | folC bifunctional protein TERM 1220 1146385 - 1146397 + g 76 -3.5 -5.37345 | TCCAAATAAGCATTA TAAAT AAG ATTTA TTTTTTCTCCTTGAA TERM 1221 1146677 - 1146697 + g 93 -5.5 -5.86965 | opp_overlap 1146676 1146679 1146694, overlap 1146679 1146694 AAGAAACTTGCAAAT TAGCTTTTT TTA AAAAAGCAA TTTTTTTTGCTAAAT CJE1232 1148682 - 1147285 - | hypothetical protein TERM 1222 1147857 - 1147873 + g 74 -2.3 -5.64006 | CATCTGGTTTTAAGG TATTGAT AAA ATCCATA TTTTTTTCATTCGAT CJE1233 1149178 - 1148666 - | putative lipoprotein leuS 1151604 - 1149175 - | leucyl-tRNA synthetase TERM 1223 1150860 - 1150877 + g 77 -4.9 -5.33921 | TTGTAGTAAAAACTT CTAAAGA ACTT TCTTTGG TTTTTTGCTTGCTTT secF 1152585 - 1151614 - | preprotein translocase subunit SecF secD 1154165 - 1152585 - | preprotein translocase subunit SecD yajC 1154430 - 1154158 - | preprotein translocase subunit YajC TERM 1224 1154721 - 1154734 + Gr 77 -5.3 -4.99645 | opp_overlap 1154721 TTAGTACCAATTATA CCAAT TATC ATTGG TTTTATTTATGGACT TERM 1225 1155405 - 1155390 - gR 83 -3.4 -5.8187 | GACTTAACAAAAAAA TATTTT CTCA AAAATA TTGAAGAATTTTCCA cutE 1154403 - 1155728 + | apolipoprotein N-acyltransferase TERM 1226 1155951 - 1155923 - TR 80 -9.8 -3.31501 | opp_overlap 1155923 1155921 ATTAATTCTTTATAA TTATACAAGCCT TGTTT AAGCTTGTATAA TATTGTTAATTTTTT TERM 1227 1155923 - 1155951 + Tr 70 -7.6 -3.6014 | opp_overlap 1155923, overlap 1155921 ATTAATTCTTTATAA TTATACAAGCCT TGTTT AAGCTTGTATAA TATTGTTAATTTTTT metK 1157176 - 1155965 - | S-adenosylmethionine synthetase CJE1240 1157301 - 1158524 + | serine/threonine transporter SstT pyrB 1158534 - 1159421 + | aspartate carbamoyltransferase catalytic subunit pepF 1159425 - 1161146 + | oligoendopeptidase F CJE1243 1161140 - 1161577 + | hypothetical protein TERM 1228 1161978 - 1161958 - g 77 -5.5 -4.98911 | CATGATAAAAACAAA GATAATGTC TAT GATATTATC CAATACATATCTTAT TERM 1229 1162383 - 1162361 - g 72 -5 -4.72272 | opp_overlap 1162361 1162377, overlap 1162370 1162377 GGCGTGGAGCAAAAA TTGAAAATAT TTT AAATTTTCAA AATGATTTTAAAAAT CJE1244 1161574 - 1163649 + | ATP-dependent DNA helicase UvrD truB 1163646 - 1164464 + | tRNA pseudouridine synthase B TERM 1230 1164608 - 1164596 - g 72 -6.3 -4.33785 | ATACTTAGAAAAGAA CTTGT TCA ACAAG TAAAGGATGAAAATT csrA 1164458 - 1164685 + | carbon storage regulator ispE 1164682 - 1165449 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 1231 1165805 - 1165781 - g 72 -2.9 -5.47159 | TTTTAACACAAAAAA TAAAGTAAAAG CTA CCCTTGCTTTA GCTAAAGGGAAAAAT smpB 1165446 - 1165898 + | SsrA-binding protein CJE1249 1165909 - 1166511 + | thioredoxin domain-containing protein TERM 1232 1166641 - 1166617 - g 83 -8.8 -4.03413 | ATTTTGTTATAGAAA TTTTGATGAA TATTT TTCATCAAAA CCTTGAGAAAGCAAG CJE1250 1166511 - 1166801 + | hypothetical protein TERM 1233 1167092 - 1167082 - gf 76 -2.6 -5.63236 | overlap 1167036 ATCTAAAAATAAAAA TAAT GAA ATTA AAATTATAGATTTTT TERM 1234 1167854 - 1167802 - gf 100 -9.6 -5.243 | gap 1, opp_overlap 1167807 1167812 1167815, overlap 1167806 1167808 TAAAGGATTAAAAAA CAAATATGAAGAATTTCATCATATA AAAT TAAACGATGAAATTCTTCA-ATATG CTGTAATTTGGGGTA TERM 1235 1167852 - 1167806 - gf 100 -9.9 -5.0917 | gap 1, opp_overlap 1167807 1167812 1167815, overlap 1167802 1167808 GGATTAAAAAACAAA TA-TGAAGAATTTCATCATATA AAAT TAAACGATGAAATTCTTCAATA TGCTGTAATTTGGGG TERM 1236 1167807 - 1167850 + GF 71 -8.4 -2.90725 | opp_overlap 1167806 1167802 1167808, overlap 1167812 1167815 GATTAAAAAACAAAT ATGAAGAATTTCATCATATA AAAT TAAACGATGAAATTCTTCAA TATGCTGTAATTTGG TERM 1237 1167849 - 1167808 - gf 100 -14.1 -4.15047 | opp_overlap 1167807 1167812 1167815, overlap 1167806 1167802 ATTAAAAAACAAATA TGAAGAATTTCATCATATA AAAT TAAACGATGAAATTCTTCA ATATGCTGTAATTTG clpA 1166798 - 1168927 + | ATP-dependent Clp protease, ATP-binding subunit ClpA aat 1168902 - 1169549 + | leucyl/phenylalanyl-tRNA--protein transferase TERM 1238 1169573 - 1169553 - T 100 -12.7 -4.7078 | opp_overlap 1169556, overlap 1169545 TTAATTACTTAAAAA TAAGCGTGA AAA TCACGCTTA TGACATCGCTTTAGC TERM 1239 1169556 - 1169570 + T 82 -10 -3.34236 | opp_overlap 1169553 ATTACTTAAAAATAA GCGTGA AAA TCACGC TTATGACATCGCTTT CJE1253 1170860 - 1169571 - | methyl-accepting chemotaxis protein TERM 1240 1170151 - 1170173 + g 80 -2 -5.74288 | opp_overlap 1170157, overlap 1170152 TCATTTTTAACCGGA TTATAACTTG CTT CAAGGTATAC TTTTTTATTATTTCT CJE1254 1171567 - 1170941 - | MarC family integral membrane protein msrB 1171941 - 1171582 - | methionine sulfoxide reductase B TERM 1241 1172541 - 1172558 + G 71 -5.5 -4.44667 | opp_overlap 1172541, overlap 1172537 GGTTTAGAAGCTAAA GGGCTTG ATGC CAACCCC TTTGTTGTTCAAAAA TERM 1242 1172615 - 1172591 - g 74 -9.5 -2.74514 | opp_overlap 1172591 1172589, overlap 1172582 1172581 TCAAAGTTCCAATCA TTCCATTAAAA ATC TTCTAATGGAA TATCTTGAAATTATA TERM 1243 1172766 - 1172754 - g 72 -2.7 -5.40072 | CTTGCGGGAAAAAAA CTTAA CAT TCAAG CAAGAATCAAAGCTG CJE1256 1172031 - 1172828 + | hypothetical protein pssA 1173547 - 1172819 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 1244 1173373 - 1173339 - G 93 -10.2 -3.98075 | opp_overlap 1173344, overlap 1173336 1173340 1173344 AGATCAGCCAAAGAA TCAAATTCTACCCCAA ATT TTGAAGTAGAATTTGT AAGTCTTGCAACACG TERM 1245 1173372 - 1173340 - G 100 -13.7 -2.98122 | opp_overlap 1173344, overlap 1173336 1173339 1173344 GATCAGCCAAAGAAT CAAATTCTACCCCAA ATT TTGAAGTAGAATTTG TAAGTCTTGCAACAC TERM 1246 1173368 - 1173344 - G 83 -8.7 -4.15366 | opp_overlap 1173344, overlap 1173336 1173340 1173339 AGCCAAAGAATCAAA TTCTACCCCAA ATT TTGAAGTAGAA TTTGTAAGTCTTGCA TERM 1247 1173499 - 1173489 - G 83 -6.8 -5.06103 | ATAACCCCTAAAAAA GCTG AAG CAGC TGTAAAAAGATTGGG CJE1258 1174174 - 1173557 - | phosphatidylserine decarboxylase-related protein ftsH 1176108 - 1174171 - | cell division protein FtsH TERM 1248 1174453 - 1174463 + g 70 -4 -4.87389 | opp_overlap 1174453 TTGTCCACCACTTAA GAAA GTA TTTC TTTGTTTTTCAAGTA prmA 1176957 - 1176112 - | ribosomal protein L11 methyltransferase cheY 1177372 - 1176980 - | chemotaxis protein CheY pglG 1178378 - 1177485 - | general glycosylation pathway protein pglF 1180150 - 1178378 - | general glycosylation pathway protein TERM 1249 1178593 - 1178634 + g 72 -2.6 -5.47821 | gap 1 CTTTTCTTAAGCCTG TGATTTTAATTTCTAAATC ATTGC GATT-AGAAAGTAAAAGCA TTTTTTTAGCTAAAT TERM 1250 1178781 - 1178757 - G 73 -5.8 -4.58466 | GCCACAAGCATAAAA TAACGCAC TATATCAGG GTGCGTTA AAGTTAAAGGCTCAT TERM 1251 1179036 - 1179022 - G 71 -5.8 -4.3739 | opp_overlap 1179020 1179017 1179022 CACTGTCGCATAAAA TTTTAG TTC CTAAAA TATTATTGATTACTG TERM 1252 1179361 - 1179351 - G 72 -4.6 -5.00616 | TTGTCTTTTAAAAAA GCCG CCA CAGC ACTATCATCTAAATC TERM 1253 1179903 - 1179887 - G 76 -2.9 -5.64328 | AAGAAAAAAACAAAA CTCAGCT AAA AGCAAAG CGATAAAAATCTTTC pglE 1181312 - 1180152 - | general glycosylation pathway protein pglD 1182021 - 1181410 - | general glycosylation pathway protein pglC 1182589 - 1181987 - | general glycosylation pathway protein TERM 1254 1182110 - 1182099 - GR 72 -3 -5.33921 | AAATCAAGCAAAAAA GAAA TATT TTTC ACATAATACACATCA pglA 1183712 - 1182582 - | general glycosylation pathway protein TERM 1255 1183142 - 1183172 + g 82 -4.2 -5.54192 | TCCAAAAAAGCTCTT TTTTTTCCGATT CTACATA AATAGGAAAAAA TTTTTTTAAATTGAT pglB 1185863 - 1183722 - | general glycosylation pathway protein pglJ 1186964 - 1185867 - | general glycosylation pathway protein pglI 1187881 - 1186952 - | general glycosylation pathway protein TERM 1256 1187032 - 1187049 + g 70 -4.1 -4.91109 | opp_overlap 1187032 TTAAAATGAGTAATA TCAAAGC AGGA GCGTTGA TTTTTATACTCAAGC TERM 1257 1187079 - 1187096 + g 72 -4.3 -5.08011 | opp_overlap 1187079 1187072 CTTTTAAACAAACAC TTATAAA GAGC TTTATAA TTTTTTGCAAGTTTT pglH 1188950 - 1187874 - | general glycosylation pathway protein TERM 1258 1188194 - 1188173 - G 75 -5.9 -4.72617 | opp_overlap 1188175 1188188 CTACAAAAGAACAAA GACAAAGCA CTTT TGCTTTTTC ATAAAGAGTCTTGAC TERM 1259 1188556 - 1188544 - G 70 -4.1 -4.95806 | AAAGCATCACAAAAA GGATA GCT TACCC TTCTTAAAAAACGCC wlaB 1190644 - 1188950 - | ABC transporter, ATP-binding/permease protein TERM 1260 1190208 - 1190198 - G 72 -4 -5.1166 | CATCAAAAGCAAAAA TGAT GAA ATCA TAGTGCTTAGATTAT TERM 1261 1190520 - 1190505 - G 74 -3.3 -5.4593 | TCAAAATAAGAAAAA TCACT GGCCAA AGTGA TAAAAGGCATTACCA TERM 1262 1190619 - 1190581 - G 81 -5.6 -5.18561 | opp_overlap 1190594, overlap 1190594 CAAATACTGAAAAAA CAAGCAAAAAAAATAAAA AAT TTTTATCTTCCTTACTTA AAATAAAAAAAAGTT TERM 1263 1190606 - 1190594 - G 89 -3.5 -6.00814 | opp_overlap 1190594, overlap 1190581 AACAAGCAAAAAAAA TAAAA AAT TTTTA TCTTCCTTACTTAAA galE 1191624 - 1190638 - | UDP-glucose 4-epimerase wlaX 1192477 - 1191683 - | polysaccharide biosynthesis protein TERM 1264 1191872 - 1191888 + g 70 -3.7 -5.10029 | overlap 1191885 GTTTAAAACATCACT TTCACAA TAT TCGTGAA TTTTTTCAAGTTCAT waaC 1192544 - 1193572 + | lipopolysaccharide heptosyltransferase I waaM 1193562 - 1194449 + | lipid A biosynthesis lauroyl acyltransferase TERM 1265 1195940 - 1195929 - g 88 -4.4 -5.69023 | AAAATAGCAAAAAAA TGCT CGAA AGCA ATCATCAAATTTATT CJE1277 1194446 - 1195996 + | lipooligosaccharide biosynthesis glycosyltransferase, putative TERM 1266 1195992 - 1195980 - T 100 -4.9 -6.20267 | opp_overlap 1195980 TCAAAAATAAAAAAA TTTCT TGG AGAAA TTAAGTTTTAAAAAT CJE1278 1196852 - 1195965 - | lipooligosaccharide biosynthesis galactosyltransferase, putative TERM 1267 1196023 - 1196059 + g 85 -2.6 -5.95946 | opp_overlap 1196044, overlap 1196021 AGCATTTTACATTTA TAAATTTTTTTTAATA ATTTA TATTTAAAATAATTTA TTTTTTTATTATTAA TERM 1268 1196130 - 1196140 + g 78 -4 -5.40279 | ATATGACTTTAAATT TTCT TTA AGAA TTTTATTTTCTTTTA TERM 1269 1196373 - 1196391 + g 80 -6.1 -5.00616 | opp_overlap 1196383 AAAAAGTTCTTCTAG GGATTTT AAATA AAAATCC TTTTTTACAAACAGA CJE1279 1198053 - 1196845 - | lipooligosaccharide biosynthesis glycosyltransferase, putative TERM 1270 1197124 - 1197110 - G 75 -7.2 -4.16921 | overlap 1197101 CAATAAGCTTTAAAA TAAGCT CTA AGCTTA GAATAATCATCGAAA TERM 1271 1197249 - 1197260 + g 74 -3 -5.43866 | TTAATAATTCTTCTT TAAC ACAA GTTA TTTTTTTAGCACTTA TERM 1272 1197428 - 1197416 - G 72 -2.7 -5.40072 | opp_overlap 1197408 1197407 1197423, overlap 1197398 TTTTTTTTAAAAAAA TCAAT CCC ACTGA TATTTTTAGTGTATT CJE1280 1199102 - 1198131 - | lipooligosaccharide biosynthesis galactosyltransferase, putative CJE1281 1199982 - 1199095 - | hypothetical protein TERM 1273 1199138 - 1199152 + g 78 -4.4 -5.49569 | opp_overlap 1199138 TTTGGGTGGCGAAAA TAAAAT CTT ATTTTA TTTTTTATATTAATA waaV 1200845 - 1200036 - | lipooligosaccharide biosynthesis glycosyltransferase waaF 1200904 - 1201854 + | ADP-heptose--LPS heptosyltransferase II CJE1284 1202604 - 1201840 - | lipooligosaccharide biosynthesis glycosyltransferase, putative TERM 1274 1202524 - 1202540 + g 83 -6.7 -5.10526 | opp_overlap 1202485, overlap 1202519 1202517 TAAACTAGGATTTTT TTCAAAA AGC TTTTGAA TTTGTTTTTTCATAT gmhA-1 1203164 - 1202604 - | phosphoheptose isomerase hldE 1204546 - 1203161 - | D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase TERM 1275 1203760 - 1203750 - G 77 -4.6 -5.27335 | overlap 1203758 TTTGCCAAACAAAAA GCCA AAA CGGC AATCACACTATCGCC TERM 1276 1203951 - 1203967 + g 76 -3.7 -5.45652 | opp_overlap 1203954, overlap 1203954 AAATTTTCAAATTTC AAAGCTT CTA AAGCTTC TTTTTTATTAGGCGT TERM 1277 1203954 - 1203964 + g 72 -5.4 -4.81306 | opp_overlap 1203954, overlap 1203951 TTTTCAAATTTCAAA GCTT CTA AAGC TTCTTTTTTATTAGG waaD 1205492 - 1204539 - | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 1278 1204917 - 1204938 + g 72 -4.5 -4.87786 | TTGATGGCCAAATTG CAAAACC ATAGAAGC GGTTTTG TTTTTATAAAATTCG CJE1288 1206020 - 1205493 - | hydrolase, putative TERM 1279 1205902 - 1205873 - G 80 -6.7 -4.82901 | opp_overlap 1205880 TTGTCGCTATAAAAA GCAAATATTTTTT AGCT AAAAAATATCTAC AAAGTTCAAAAATTC TERM 1280 1206102 - 1206090 - H 74 -4.9 -4.96501 | opp_overlap 1206057 1206055, overlap 1206057 1206055 1206054 TTTTATAAAAATAAA GATAT ATA ATATC TGGCAATCTAATTTT cyf 1206135 - 1206437 + | cytochrome c553 TERM 1281 1206467 - 1206438 - T 77 -7.3 -4.2354 | opp_overlap 1206449, overlap 1206428 1206449 GAAACTTTAAAATAA TTTCTAAAAAAGG CTTT CCTTTTCAAGAAA GCCTTTTTTTATCCA TERM 1282 1206470 - 1206449 - T 100 -9.5 -5.06103 | opp_overlap 1206449, overlap 1206438 ATAATTTCTAAAAAA GGCTTTCCT TTTC AAGAAAGCC TTTTTTTATCCAAAG TERM 1283 1206449 - 1206470 + T 100 -7.3 -5.60993 | opp_overlap 1206438 1206449 ATAATTTCTAAAAAA GGCTTTCCT TTTC AAGAAAGCC TTTTTTTATCCAAAG CJE1290 1206666 - 1206460 - | cytochrome oxidase maturation protein, cbb3-type, putative CJE1291 1209014 - 1206663 - | heavy metal translocating P-type ATPase TERM 1284 1206807 - 1206796 - G 82 -4.4 -5.59962 | opp_overlap 1206796, overlap 1206797 TAAAACAAAGAAAAA GCAA GATT TTGC TTGATAATTTTAAAG TERM 1285 1210302 - 1210272 - g 88 -7.6 -4.92757 | TCAGGAACAAGAAAA GAAGAATTGCTCCA AGG CGTAGCAAATCTTC AAAAAATTTGGGCAA rho 1209129 - 1210427 + | transcription termination factor Rho TERM 1286 1211899 - 1211881 - g 77 -9.6 -2.95472 | overlap 1211880 ATATGCTTAAAGAAG GGGCCAAA AAA TTTGACCC ACAAGAAGATCTTAA dnaX 1210431 - 1211960 + | DNA polymerase III subunits gamma and tau CJE1295 1214646 - 1212547 - | copper-translocating P-type ATPase CJE1296 1214840 - 1214646 - | hypothetical protein CJE1297 1215780 - 1214830 - | cation efflux family protein TERM 1287 1215781 - 1215834 + r 82 -8.5 -3.97569 | opp_overlap 1215780, overlap 1215778 1215782 TAAAAATTTATACAT CTTATATCCTTTTTTGCTTGACATT TTAA GATATTAAGCTAAAAAGGATATAAA TATTTGTTATTTTTA TERM 1288 1215782 - 1215833 + r 91 -12 -2.96101 | opp_overlap 1215780, overlap 1215781 1215778 AAAAATTTATACATC TTATATCCTTTTTTGCTTGACATT TTAA GATATTAAGCTAAAAAGGATATAA ATATTTGTTATTTTT CJE1298 1216119 - 1215856 - | hypothetical protein CJE1299 1216683 - 1216189 - | hypothetical protein CJE1300 1217456 - 1216680 - | hypothetical protein ldh 1217523 - 1218449 + | L-lactate dehydrogenase CJE1302 1219050 - 1218412 - | DedA family protein TERM 1289 1218464 - 1218450 - G 76 -8.6 -3.46285 | opp_overlap 1218450, overlap 1218446 AAAGATAAAATTTAA GCCTTT TTA AAAGGC TTTTTGATTTTGATA TERM 1290 1218450 - 1218464 + g 100 -8.6 -5.1166 | opp_overlap 1218446 1218450 AAAGATAAAATTTAA GCCTTT TTA AAAGGC TTTTTGATTTTGATA TERM 1291 1219044 - 1219034 - G 70 -4 -4.89477 | opp_overlap 1219034 GTCTCAACAATAAAA GAAA TGA TTTC TTGCATATTAGCCTT TERM 1292 1219125 - 1219111 - R 86 -7.1 -4.946 | opp_overlap 1219111, overlap 1219105 ATTAAACAGTAAAAA GCGGT TTTAT ACCGC TTTTTTTATTTACCT TERM 1293 1219111 - 1219125 + r 100 -7.1 -5.96894 | opp_overlap 1219111 1219105 ATTAAACAGTAAAAA GCGGT TTTAT ACCGC TTTTTTTATTTACCT CJE1303 1219358 - 1219131 - | hypothetical protein CJE1304 1220799 - 1219369 - | hypothetical protein TERM 1294 1219726 - 1219744 + g 70 -6 -4.2528 | opp_overlap 1219725 1219726 TTGCACAGCAGGAAT TGCACTTA GAG TATGTGCA TTTGTTCCGTTAGAA TERM 1295 1220375 - 1220363 - G 71 -7.7 -3.4285 | GCATCTAAGTCATAA GGAGT ACC ACTCC AACCCATTTGAGACC TERM 1296 1220682 - 1220703 + g 81 -7.3 -4.62872 | overlap 1220674 1220697 TGATTTGTGCAAGCT CAGCTTGAA TTTG TGCAAGCTG TTTTTGAAGCTTGGT TERM 1297 1220798 - 1220782 - G 70 -8.1 -3.13007 | opp_overlap 1220778, overlap 1220769 1220768 1220778 1220781 AGCACTTAAAATAAG TGAAAAC TTA GTTTTCA TAATCATAACTCCTT TERM 1298 1220896 - 1220917 + r 83 -8.8 -3.98842 | CATTAATCATTTTTA GCTAGTCA AACTTA TGACTAGC TTTGTAAATATTGTA TERM 1299 1220934 - 1220952 + r 74 -6.2 -4.4874 | opp_overlap 1220945, overlap 1220945 1220946 TTGTAAATATTGTAG TTTTAAAA AAG TTTTAAAA TTTTAAATTTTTAAA ppiB 1221445 - 1220963 - | peptidyl-prolyl cis-trans isomerase B CJE1306 1222162 - 1221455 - | hypothetical protein CJE1307 1222267 - 1222608 + | SMR family multidrug efflux pump CJE1308 1222608 - 1222916 + | SMR family multidrug efflux pump TERM 1300 1222911 - 1222939 + T 77 -8.3 -3.5268 | opp_overlap 1222913 1222919, overlap 1222913 1222919 GTATTTTTGCTAAAT TATTAAAACAGCA AAA TGCGGTTTTAATG TTCCATTTTGTTTTT TERM 1301 1222913 - 1222937 + T 75 -8.7 -3.29811 | opp_overlap 1222913 1222919, overlap 1222911 1222919 ATTTTTGCTAAATTA TTAAAACAGCA AAA TGCGGTTTTAA TGTTCCATTTTGTTT TERM 1302 1222937 - 1222913 - T 71 -8.7 -2.90615 | opp_overlap 1222913 1222911 1222919, overlap 1222919 ATTTTTGCTAAATTA TTAAAACAGCA AAA TGCGGTTTTAA TGTTCCATTTTGTTT argS 1224526 - 1222934 - | arginyl-tRNA synthetase TERM 1303 1223032 - 1223007 - G 74 -7.1 -4.00469 | opp_overlap 1223007, overlap 1223020 CTAAGAGCAACCAAA GAAAATAATTT AAGC AAATCATTTTC ATTTGCAGAGCCTAC TERM 1304 1223346 - 1223356 + g 83 -6.8 -5.14563 | opp_overlap 1223346 ATATCAAATTCCAAA TGCG TAT CGCA TTTTTTGCTCAAAAA CJE1310 1224777 - 1224538 - | twin arginine-targeting protein translocase gmk 1225396 - 1224779 - | guanylate kinase CJE1312 1227042 - 1225399 - | hypothetical protein TERM 1305 1225446 - 1225466 + g 75 -9.1 -2.98479 | overlap 1225440 TATTCATATTCATAC CCTTAAGAG CAG CTTTTAAGG TATCATCTTTAATAC fliR 1227866 - 1227099 - | flagellar biosynthesis protein FliR TERM 1306 1227754 - 1227731 - G 71 -3.2 -5.2853 | TAGTCAAAAATAAAA CTATAGTACT TTTT ATTACCATAG GAATAGAATTATGTG CJE1314 1228488 - 1227853 - | ABC transporter, ATP-binding protein TERM 1307 1228071 - 1228055 - G 73 -8.7 -3.05997 | opp_overlap 1228053 1228055 TTTTTACAAAGCACA CGTGCGA TAC TCACACG CTGTTGTTGTCCGCC TERM 1308 1228473 - 1228440 - G 70 -5.3 -4.64657 | TTAAACCCTCAAAAA GCGGATAATCAAAAC TATG GCTTAAATTTTCCGC TCTTAAGAGTTCCAT tsf 1229574 - 1228501 - | elongation factor Ts rpsB 1230365 - 1229574 - | 30S ribosomal protein S2 CJE1317 1231644 - 1230481 - | cyclopropane-fatty-acyl-phospholipid synthase, putative petC 1232896 - 1231772 - | ubiquinol--cytochrome c reductase, cytochrome c1 subunit petB 1234143 - 1232893 - | ubiquinol--cytochrome c reductase, cytochrome b subunit petA 1234648 - 1234145 - | ubiquinol--cytochrome c reductase, iron-sulfur subunit TERM 1309 1234533 - 1234551 + g 78 -3.1 -5.52384 | opp_overlap 1234533 CCTGCAGCTTTAACA CTTGGAA GCGGA TCCCAAG TTTTTTTCATCGCAA arsB 1236025 - 1234739 - | arsenical pump membrane protein TERM 1310 1235352 - 1235336 - G 74 -2.3 -5.65927 | opp_overlap 1235339, overlap 1235339 TATGCAAAGAAAAAA CAATTTC AAT GAAATTT GCTCTTTTTTGATTA TERM 1311 1235349 - 1235339 - G 70 -4 -4.88687 | opp_overlap 1235339, overlap 1235336 GCAAAGAAAAAACAA TTTC AAT GAAA TTTGCTCTTTTTTGA TERM 1312 1235473 - 1235448 - G 86 -2.7 -6.11229 | opp_overlap 1235463, overlap 1235440 1235463 AGCAAAACAAAAAAA TTTGGCAAAAA CATA TTTTTAGCAAA TTCTAAAAATTCTAT gidA 1237885 - 1236026 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1313 1237966 - 1237933 - R 77 -9.1 -3.38034 | opp_overlap 1237930, overlap 1237931 1237934 AAAGATTATATAATA CTTAGACTTAAAACA AACT CGTTTTAAGTCTAAC AAAAATTTATTTAGC TERM 1314 1237965 - 1237934 - R 95 -12.6 -2.61736 | opp_overlap 1237930, overlap 1237933 1237931 AAGATTATATAATAC TTAGACTTAAAACA AACT CGTTTTAAGTCTAA CAAAAATTTATTTAG CJE1323 1238470 - 1237973 - | methyl-accepting chemotaxis protein TERM 1315 1238017 - 1238036 + g 70 -5 -4.61231 | overlap 1238019 GCTCATTATAAGTTT TATCTGCA TCTT TGCAGAAA TTTTTAAGCATCTCA CJE1324 1239867 - 1238488 - | methyl-accepting chemotaxis protein TERM 1316 1239139 - 1239163 + g 88 -8.8 -4.4715 | ATCGGCTATATCGCG TATTACTTCA ACCAC TGAAGTAATA TTTTGTGAATTAGCC TERM 1317 1239298 - 1239310 + g 72 -4.9 -4.94972 | AGAAATGGCATCCAC TGTAT CAT ATACA TTTTTCATTATACTA CJE1325 1240478 - 1239984 - | methyl-accepting chemotaxis protein dctA 1240825 - 1242123 + | C4-dicarboxylate transport protein CJE1327 1242926 - 1242120 - | hypothetical protein TERM 1318 1242814 - 1242849 + g 72 -4.2 -5.14563 | overlap 1242817 GCTTCTTTGGTATTT TTATAATCAAAGTGCT CCCA AGAATTTTGATTATTA TTTTTTGCTAAAGCC TERM 1319 1242817 - 1242846 + g 73 -5.9 -4.67552 | overlap 1242814 TCTTTGGTATTTTTA TAATCAAAGTGCT CCCA AGAATTTTGATTA TTATTTTTTGCTAAA TERM 1320 1244530 - 1244544 + G 74 -8.6 -3.29461 | CTTGGATTATCACTT TACCAG CCG CTGGTA TTATGGCAGCACTTG CJE1328 1243068 - 1244594 + | phosphate transporter family protein TERM 1321 1244603 - 1244617 + T 78 -4.4 -5.41359 | overlap 1244592 AATTTAAGTAAAGCT TATTTT TCT AAAATA TTTTTTCCTTTAATT CJE1329 1245780 - 1244602 - | dihydroorotase TERM 1322 1244682 - 1244696 + g 71 -5.8 -4.37199 | opp_overlap 1244678 1244676, overlap 1244678 1244686 CAGAATAAAGAGAAC TTTTTG GAG CAAAAA TTTCTTCATTCTCAT gpsA 1246683 - 1245790 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase gatB 1248101 - 1246683 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1323 1248037 - 1248049 + g 77 -4.9 -5.20783 | opp_overlap 1248026 GAAGTTGCACATGAG CAAAA GAT TTTTG TTTTTGTATTTAACT TERM 1324 1248306 - 1248295 - g 70 -5.8 -4.33165 | opp_overlap 1248294 CTAAAGTTATGAAAA CACC TAAG GGTG ATGATATTAGCGTGT luxS 1248216 - 1248710 + | S-ribosylhomocysteinase TERM 1325 1249456 - 1249444 - g 74 -3.4 -5.48163 | opp_overlap 1249444 1249444, overlap 1249403 AAACAAACCAAAAAA GCTT GTTTA AAGC TTTTAAAAACCTTTG CJE1333 1249021 - 1250013 + | 2OG-Fe(II) oxygenase family oxidoreductase CJE1334 1250006 - 1250794 + | NLPA family lipoprotein metE 1250806 - 1253070 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 1326 1253158 - 1253177 + G 82 -7.9 -4.38712 | opp_overlap 1253157 GCTATCTTAGATGAT TTAGGGC AATTAA GCCCTAA TTTTATCAGCGTAAC metF 1253080 - 1253928 + | 5,10-methylenetetrahydrofolate reductase CJE1337 1254141 - 1253950 - | hypothetical protein atpB 1254818 - 1254138 - | F0F1 ATP synthase subunit A radA 1256227 - 1254887 - | DNA repair protein RadA ftsY 1257093 - 1256227 - | signal recognition particle-docking protein FtsY TERM 1327 1256745 - 1256767 + g 77 -5.7 -4.99035 | AAGTATCACACGCTC CTAAAATCA CTTTT TGATTTTGG TTTTTGTATAAATAA TERM 1328 1257096 - 1257086 - G 72 -2.6 -5.40072 | CCTTTTTTAAAAAAA TTAA ACA TTAA AGTATAGCCTTTTGT CJE1341 1257650 - 1257093 - | putative lipoprotein TERM 1329 1257837 - 1257815 - gH 70 -5 -4.57533 | overlap 1257810 AACAAGATTATAAAA TATTTAAAGA ATG TCTTAAAATA ATAAAGCTATTTAAA TERM 1330 1258291 - 1258281 - g 89 -4 -5.85425 | opp_overlap 1258281 GAAAGAAAGAAAAAA TGAT AGA ATCA CTTATCGCACTTATA CJE1342 1257733 - 1258359 + | hypothetical protein TERM 1331 1258574 - 1258562 - gf 78 -3.4 -5.54403 | AAAAAAGAACAAAAA CTTC AGCAA GAAG AAGAAAAACTAAAAG CJE1343 1258280 - 1259833 + | phosphodiesterase TERM 1332 1260059 - 1260049 - g 74 -3.2 -5.38321 | overlap 1260042 AAATATTATAAAAAA GACA TTA TGCC TTATTTTAAAAAACA CJE1344 1259842 - 1260399 + | DedA family protein TERM 1333 1261488 - 1261502 + GT 73 -3.6 -5.22039 | GGAGATTTGCTCAAT TTTATC TTA GATGAA TTTTTTAAATTTAAA rbn 1262408 - 1261602 - | ribonuclease BN CJE1345 1260399 - 1261658 + | ComEC/Rec2 family protein TERM 1334 1262194 - 1262211 + gT 70 -8.5 -2.6155 | opp_overlap 1262198, overlap 1262184 1262193 GTATCGATGTAGGTA GCAACAA CATC TTGTTGC GTTGGTATTAAAAAA glcD 1263794 - 1262412 - | glycolate oxidase, subunit GlcD CJE1348 1264507 - 1263797 - | hypothetical protein CJE1349 1264616 - 1264515 - | hypothetical protein CJE1350 1264644 - 1265804 + | M24/M37 family peptidase CJE1351 1266004 - 1265801 - | hypothetical protein TERM 1335 1265848 - 1265866 + g 95 -8.2 -5.63236 | opp_overlap 1265848 TGATTAAAGAATTTA GAAGAGTT GCA AGCTCTTC TTTTTCTTTTTCACT CJE1352 1266686 - 1266006 - | hypothetical protein ribE 1267261 - 1266650 - | riboflavin synthase subunit alpha CJE1354 1269810 - 1267270 - | hypothetical protein groES 1269972 - 1270232 + | co-chaperonin GroES TERM 1336 1270701 - 1270676 - g 76 -2.7 -5.63645 | gap 1 GTAAAAGATAAAAAA GAAATTGCA-CA AGT TGCTACAATCTC AGCCAACTCTGATGA TERM 1337 1271360 - 1271342 - g 70 -3.9 -5.05601 | TATGACAGAGAAAAA TTACAAG AAAGA CTTGCAA AATTAAGTGGTGGTG groEL 1270253 - 1271890 + | chaperonin GroEL TERM 1338 1271913 - 1271929 + T 82 -10.9 -2.74514 | overlap 1271905 TCTAACCTCTTATCA GCAAGGA TTT TCCTTGC TGATTACCAATTTAA CJE1357 1273123 - 1271933 - | sensor histidine kinase TERM 1339 1272249 - 1272266 + g 79 -8.5 -3.93597 | overlap 1272237 GGAGCAAAAATATTT GCTTGAT TTAA ATCAAGC TTTAGTGTAATTTTT TERM 1340 1273077 - 1273111 + g 79 -5.9 -5.03314 | AAAAAAATACCTGTA GTTGTTAGGTAGATT AATAA AATTTGCCTAATGAC TTTTTTAGCCATAGC CJE1358 1273781 - 1273116 - | DNA-binding response regulator CJE1359 1273929 - 1274528 + | hemerythrin family non-heme iron protein CJE1360 1274539 - 1274787 + | hypothetical protein TERM 1341 1274818 - 1274792 - T 100 -11.1 -5.95449 | opp_overlap 1274791 1274790 AAACAAAATAAAAAA CTTTATCACAA TTTTT TTGTGATAAAG ACTTATTAATTTTTT CJE1361 1276292 - 1275045 - | sensor histidine kinase TERM 1342 1275773 - 1275788 + g 77 -4.8 -5.19916 | CAAGCTTTCCTTGGG CAAATT TATC AATTTG TTTTTTAAGTCTTTT CJE1362 1276963 - 1276289 - | DNA-binding response regulator TERM 1343 1277011 - 1277035 + r 100 -10.1 -5.27335 | opp_overlap 1277007 1277011 1277014 1277019 TTAAACTAAAATTTA TAACGAAAGGA AAA TCCTTCCGTTA TTTTTATTTAAGCAC TERM 1344 1277035 - 1277011 - R 88 -12.3 -2.82666 | opp_overlap 1277011, overlap 1277007 1277014 1277019 TTAAACTAAAATTTA TAACGAAAGGA AAA TCCTTCCGTTA TTTTTATTTAAGCAC TERM 1345 1277032 - 1277014 - R 82 -9.6 -3.53787 | opp_overlap 1277011, overlap 1277011 1277007 1277019 AACTAAAATTTATAA CGAAAGGA AAA TCCTTCCG TTATTTTTATTTAAG htrA 1278457 - 1277039 - | protease DO TERM 1346 1278260 - 1278240 - G 90 -6.9 -5.55664 | opp_overlap 1278240, overlap 1278225 GGATCATTAAAAAAA TCATCCAAA GGG CTTGGACGA TTTGCTCTTGTAATA dnaJ-1 1278658 - 1279551 + | co-chaperone protein DnaJ CJE1365 1279567 - 1279941 + | MerR family transcriptional regulator CJE1366 1279948 - 1281573 + | sodium/hydrogen exchanger family protein CJE1367 1281583 - 1281915 + | hypothetical protein CJE1368 1281912 - 1282532 + | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein TERM 1347 1284070 - 1284058 - g 81 -2.7 -5.67283 | overlap 1284051 AATTTAAATAAAAAA TTTGA TAT CCAAA TTTTATTAGAAAAAC glyS 1282588 - 1284582 + | glycyl-tRNA synthetase subunit beta TERM 1348 1284917 - 1284899 - g 72 -2.5 -5.46706 | AGTTGAAAACAAAAA GATTTTT CCACC AAAAACC ATACAAGAACGCATC CJE1370 1284579 - 1285400 + | M24/M37 family peptidase TERM 1349 1285649 - 1285668 + G 73 -3.7 -5.1861 | CTTGAATTAAGACCT GAAATTT TTTCTC AAATTTC TTTTTTCGTCATAGA TERM 1350 1286072 - 1286094 + G 70 -4.2 -5.00616 | opp_overlap 1286050 1286084, overlap 1286073 CACGAAGTTTTTAGC CCTTTTGAAG TAT CTTTAAAAGA TTTTTTCGGCAAAAG TERM 1351 1286073 - 1286093 + G 72 -7.7 -3.60048 | opp_overlap 1286050 1286084, overlap 1286072 ACGAAGTTTTTAGCC CTTTTGAAG TAT CTTTAAAAG ATTTTTTCGGCAAAA CJE1371 1285397 - 1286347 + | hypothetical protein CJE1372 1287318 - 1286344 - | Ppx/GppA family phosphatase TERM 1352 1287117 - 1287101 - G 83 -8.7 -4.07568 | opp_overlap 1287099 CTTGCCTTTCTAAAA GCTGCAG TCG CTACAGC TCTCGCTTTGCTTAA TERM 1353 1287153 - 1287163 + g 78 -4 -5.34055 | opp_overlap 1287153 GCTCTTTAGCTAAAA TACT CAA AGTA TTTTTTAATCTTTGT pdxJ 1287374 - 1288147 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 1354 1288955 - 1288933 - g 74 -6.4 -4.42235 | opp_overlap 1288923 AATTTGCAAAAAGAA TTGCTTTTAA ATT TTAAAGGCAA GGGCGTTTATCTACC TERM 1355 1288984 - 1288994 + G 74 -6.8 -4.26076 | CCCCATCCTTTAGTG GCTG ATA CAGC TTTTACTAAGACTGG pdxA 1288144 - 1289238 + | 4-hydroxythreonine-4-phosphate dehydrogenase CJE1375 1289539 - 1289228 - | hypothetical protein CJE1376 1289829 - 1289512 - | hypothetical protein TERM 1356 1289969 - 1289985 + G 85 -7.3 -4.9725 | opp_overlap 1289951 AAAAAAGCTCTTTTT GCACTAG CTC TTAGTGC TTTTTGTATGGGCGT TERM 1357 1291122 - 1291112 - g 78 -4 -5.42265 | TTAAATTATAAAAAA TTTC AAA GAAA AAGTTTTACAAAGGT CJE1377 1289942 - 1291141 + | transporter, putative CJE1378 1291197 - 1291517 + | hypothetical protein TERM 1358 1291571 - 1291551 - f 83 -8.4 -4.17516 | opp_overlap 1291547 CTCAAACTACATAAA CGAGAATT CCAAT AATTCTCG TAAAATTTCTAATAA hemE 1291701 - 1292723 + | uroporphyrinogen decarboxylase TERM 1359 1293039 - 1293023 - g 95 -8.1 -5.56264 | GCTAAAGATAAAAAA TTGCTTA TTT TAAGCAA TGGTACAGCTGTATT CJE1380 1292720 - 1293622 + | radical SAM domain-containing protein CJE1381 1294815 - 1293619 - | hypothetical protein TERM 1360 1294153 - 1294137 - G 72 -6.7 -4.18494 | CATTTTTATTGAAAA TTTTATC CTT GATAAAA ATCAAATGAAAGTCA uvrC 1296619 - 1294817 - | excinuclease ABC subunit C TERM 1361 1294963 - 1294981 + g 74 -2.4 -5.54885 | overlap 1294965 CTAAATTTGCAAGCT TAGAACTT TTC AAGTCCTG TTTTTTCTTAGTATT CJE1383 1297106 - 1296612 - | hypothetical protein CJE1384 1297110 - 1297241 + | hypothetical protein TERM 1362 1297627 - 1297617 - g 78 -4 -5.41746 | AATCTTCCAAAAAAA CAAA CCG TTTG GATGAGTCATTCTGA guaA 1297245 - 1298780 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1363 1298789 - 1298837 + F 83 -8.6 -4.15788 | gap 1, opp_overlap 1298815 1298816, overlap 1298802 GGAATGATCCATTTT TTCTAGCACTTATTTTTATTATA AAAT TTTTATAAAAATAAG-GCTAGAA TTTATTCAAGAAATT TERM 1364 1298995 - 1298975 - g 81 -2.5 -5.71983 | opp_overlap 1298975, overlap 1298978 GGAATGATAAAAAAA GTATGCCAA GTG TTGGTATGC TTGTGGAATTTAGAA CJE1386 1298866 - 1300326 + | hypothetical protein purD 1300566 - 1301816 + | phosphoribosylamine--glycine ligase CJE1388 1301813 - 1302265 + | hypothetical protein CJE1389 1302255 - 1304303 + | organic solvent tolerance protein, putative TERM 1365 1305285 - 1305271 - g 71 -5.8 -4.4448 | AAATCGCTAAAGAAA TTTCAA ATC TTGAAA TCGCTAAAGAGTGGA pnp 1304373 - 1306532 + | polynucleotide phosphorylase/polyadenylase TERM 1366 1306574 - 1306599 + G 85 -8.5 -4.43477 | opp_overlap 1306574 CCTTTTTTTGACAAA GATTCTAAAAT CTTA ATTTTAGGATC TTTTCCTTCGGTAAA CJE1391 1306529 - 1307011 + | hypothetical protein TERM 1367 1307077 - 1307061 - T 90 -5.1 -5.77677 | opp_overlap 1307061 TAAAACAAGAAAAAA GCTAGTT AAT ATCTAGC TTTTGCGTGTTATCC CJE1392 1307724 - 1307062 - | hypothetical protein TERM 1368 1308165 - 1308155 - H 73 -4 -5.40072 | TTGGTGCGAAAAAAA GATT GCT AATC CCACTTGCAGCCACT CJE1394 1308976 - 1309431 + | low molecular weight phosphotyrosine protein phosphatase family protein TERM 1369 1309529 - 1309555 + F 100 -9.5 -4.93288 | opp_overlap 1309528 TCCTTAAAATTACAC GCCTAGCTTAA ATCCC TTTAGCTAGGC TTTTCTTTAGATGTT TERM 1370 1310629 - 1310613 - g 70 -3.7 -5.06451 | overlap 1310615 1310619 TACTATGGTAAAAAA GATAAAG TTA CTTTAAC CACAATTGAAGATCA porA 1309683 - 1310978 + | major outer membrane protein TERM 1371 1311002 - 1311020 + T 100 -10.2 -5.64274 | opp_overlap 1310982 TAAGTCTAACTTCAA GGCGGGGT TTT GCTCCGCC TTTTTTTATGCCTGA dnaJ-2 1312215 - 1311094 - | co-chaperone protein DnaJ racR 1312372 - 1313043 + | DNA-binding response regulator TERM 1372 1313369 - 1313395 + G 70 -6 -4.32049 | opp_overlap 1313369 AAAATATCATAGCAA TCTTTATTTTGA TGT TCAATGTAAAGA TTTTGATGGCTTGTA racS 1313040 - 1314275 + | sensor histidine kinase TERM 1373 1314698 - 1314709 + G 75 -4.4 -5.24531 | CATAGTATTAATTCT GATG CAAC CATC TTTTTTATAGAGGAT recR 1314275 - 1314847 + | recombination protein RecR hydD 1315380 - 1314844 - | hydrogenase maturation protease HydD hydC 1316093 - 1315377 - | quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit hydB 1317795 - 1316080 - | quinone-reactive Ni/Fe-hydrogenase, large subunit hydA 1318880 - 1317798 - | quinone-reactive Ni/Fe-hydrogenase, small subunit mnmC 1320899 - 1319058 - | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 1374 1319629 - 1319618 - G 71 -3 -5.31275 | opp_overlap 1319618 TCTCATCATAAAAAA CAAA ATCT TTTG TATCTGCACCCATAG TERM 1375 1320256 - 1320268 + g 72 -2.7 -5.34555 | overlap 1320251 1320266 ATCATTTCTCTTTTT CTAAA ACC TTTGG TTTTTTCTACTCTAA CJE1405 1322875 - 1320896 - | N-acetylmuramoyl-L-alanine amidase TERM 1376 1322094 - 1322110 + g 71 -6.7 -3.91984 | overlap 1322090 CTAGTAGTTTCTTTT GAAAAAA TTA TTTTTTC TTCTTTAAAAGATAT CJE1406 1323966 - 1322875 - | 2-nitropropane dioxygenase family oxidoreductase tyrS 1325168 - 1323963 - | tyrosyl-tRNA synthetase TERM 1377 1324279 - 1324295 + g 76 -5.2 -5.07567 | opp_overlap 1324279 TCTGTAATCTCTAAA GCTAAA TTTTC TTTAGC TTTTTTAGGATGTAA CJE1408 1327375 - 1325180 - | RelA/SpoT family protein TERM 1378 1326376 - 1326389 + g 74 -5.3 -4.86731 | AAAGTGTGGTATGTA TGGTT TGAT AACCA TTTTGTTTAGGCAAG rpoZ 1327583 - 1327359 - | DNA-directed RNA polymerase subunit omega pyrH 1328313 - 1327594 - | uridylate kinase CJE1411 1329558 - 1328365 - | M24/M37 family peptidase TERM 1379 1329559 - 1329538 - G 100 -3.8 -6.32976 | AAAAAAACAAAAAAA GATAAGAA TATTTT TTCTCATC TTTTAACCTTAAACA CJE1412 1330361 - 1329555 - | cell division protein FtsX, putative lolD 1331013 - 1330348 - | lipoprotein releasing system ATP-binding protein LolD TERM 1380 1330704 - 1330688 - G 72 -8.1 -3.28791 | ACTTTTTTGCTATAA CCTTTAA TCA TTAAAGG CAACATAACATTTTT trmB 1332261 - 1331083 - | tRNA (guanine-N(7))-methyltransferase TERM 1381 1331476 - 1331494 + g 71 -3.2 -5.252 | ATCTTCATATTTGCT TGAAATTT CTA AATTTTCA TTTTTTCTAAGACTA TERM 1382 1331646 - 1331656 + g 80 -6.8 -4.82901 | overlap 1331643 CTTTCCCAATAACTC GCCT ATG AGGC TTTTTGTCCCAAGGA TERM 1383 1332093 - 1332111 + g 77 -4.6 -5.21709 | opp_overlap 1332096, overlap 1332094 GTTTATCGCCTTTAA TCACAAAA CCA TTTTGTGC TTTTTTAATCTGCAG TERM 1384 1332094 - 1332110 + g 77 -8.1 -3.72302 | opp_overlap 1332096, overlap 1332093 TTTATCGCCTTTAAT CACAAAA CCA TTTTGTG CTTTTTTAATCTGCA CJE1415 1333493 - 1332261 - | fibronectin type III domain-containing protein TERM 1385 1333079 - 1333105 + gr 78 -10.2 -2.63257 | opp_overlap 1333078 1333082, overlap 1333084 1333096 1333096 CAGCTTGAACAAAAG GAACAGCTTCAA GTC TTGGAGCTGTGC TCACTTCTATAACCT TERM 1386 1333102 - 1333082 - GR 79 -8.3 -3.82261 | opp_overlap 1333079 1333084 1333096 1333096, overlap 1333078 CTTGAACAAAAGGAA CAGCTTCAA GTC TTGGAGCTG TGCTCACTTCTATAA CJE1416 1334409 - 1333441 - | ribosomal large subunit pseudouridine synthase D CJE1417 1334487 - 1335587 + | rod shape-determining protein RodA, putative TERM 1387 1335683 - 1335669 - f 70 -7.8 -3.25942 | opp_overlap 1335669 AGTTGGTTAGAGCAA CCGGCT CAT AACCGG TTGGTCGCAGGTTCG TERM 1388 1335976 - 1335966 - g 70 -5.4 -4.57837 | ATAGTTTTTTAAAAA GCAT TAA ATGC GAAAGTGATAAAAAA TERM 1389 1336070 - 1336058 - g 70 -3.5 -5.03314 | CCTAGTGGTAAAAAA TTATT TAA AATAA GACAAGCAAATGATA TERM 1390 1336168 - 1336150 - g 77 -9 -3.56862 | AGAAATCGCTTTAAA TGCTTTTA AGC TAAAAGCA AAAGGACAAAACATA CJE1418 1335926 - 1337101 + | phage integrase family site specific recombinase TERM 1391 1337084 - 1337114 + T 84 -9.9 -3.56862 | gap 1, opp_overlap 1337084 GATTATATCGAAAAA CTTGCAGGG-GATT TTTA AATCACCTTGCAAG TTTGCAACCATTTAT TERM 1392 1337114 - 1337084 - T 81 -7.7 -4.7173 | gap 1, opp_overlap 1337084 GATTATATCGAAAAA CTTGC-AGGGGATT TTTA AATCACCTTGCAAG TTTGCAACCATTTAT CJE1419 1337304 - 1337098 - | DNA binding protein, putative TERM 1393 1337229 - 1337259 + g 71 -5.5 -4.46587 | overlap 1337230 TCATTTTGCGAATTT TTAGCGGAGTA AATCCCAGA TACTCCGCTAC TTCTTTTGTTGATAA TERM 1394 1337230 - 1337258 + g 74 -9 -3.26868 | overlap 1337229 CATTTTGCGAATTTT TAGCGGAGTA AATCCCAGA TACTCCGCTA CTTCTTTTGTTGATA CJE1420 1337659 - 1337306 - | hypothetical protein TERM 1395 1337340 - 1337350 + g 74 -5.4 -4.89233 | TCAAAGCCTAATTTT GCAA TAA TTGC TTTTTGCTCTTCATA TERM 1396 1337622 - 1337632 + g 72 -5.4 -4.74989 | AGCTCTTTTTCTAAT GCTA TTT TAGC TTTTATGTATTCTTT TERM 1397 1337647 - 1337658 + g 74 -3 -5.43621 | overlap 1337639 CTTTTATGTATTCTT TGAA TTCT TTCA TTTTTTATCCTTTCT CJE1421 1338432 - 1337677 - | site-specific DNA-methyltransferase CJE1422 1338676 - 1338410 - | emm-like protein CJE1423 1339031 - 1338660 - | hypothetical protein CJE1424 1339256 - 1339032 - | hypothetical protein TERM 1398 1339182 - 1339206 + g 78 -9.5 -3.37091 | opp_overlap 1339182 1339183, overlap 1339173 1339189 AAGACCTTTAAAAAA TTTAGAATTTG GCA CAAATTCTAAG TTGCATTTTGAACAT TERM 1399 1339206 - 1339182 - G 86 -7.3 -5.04987 | opp_overlap 1339173 1339182 1339189, overlap 1339183 AAGACCTTTAAAAAA TTTAGAATTTG GCA CAAATTCTAAG TTGCATTTTGAACAT TERM 1400 1339205 - 1339183 - G 90 -10.8 -3.61908 | opp_overlap 1339173 1339182 1339189, overlap 1339182 AGACCTTTAAAAAAT TTAGAATTTG GCA CAAATTCTAA GTTGCATTTTGAACA CJE1425 1339759 - 1339265 - | hypothetical protein CJE1426 1340277 - 1339963 - | hypothetical protein TERM 1401 1340262 - 1340276 + g 91 -5 -5.88061 | CATTATCTTTTTGTA TGGGTT TAA AACTCA TTTTTTTCCTTTTTT CJE1427 1340676 - 1340356 - | hypothetical protein CJE1428 1340773 - 1340669 - | hypothetical protein TERM 1402 1340819 - 1340830 + r 72 -7.2 -3.79445 | opp_overlap 1340819 GGTAAAAGATGATAA GGGC TTTC GCCC TTTGCCTTAATGCTT TERM 1403 1340830 - 1340819 - R 70 -7.2 -3.60884 | opp_overlap 1340819 GGTAAAAGATGATAA GGGC TTTC GCCC TTTGCCTTAATGCTT CJE1429 1341300 - 1341064 - | hypothetical protein CJE1430 1342081 - 1341314 - | RloG protein, putative TERM 1404 1341356 - 1341368 + g 70 -3.5 -5.1286 | GTTAAAAATTCTATA TAAAA TGA TTTTA TTTTTATCGTTTTTA CJE1431 1342247 - 1342098 - | hypothetical protein TERM 1405 1342142 - 1342127 - GR 82 -4 -5.65927 | TAGCCAAAGAAAAAA CAAAAC CTAC GCTTTG CTTTATAGCTTCTTT CJE1432 1342347 - 1342219 - | hypothetical protein CJE1433 1342678 - 1342415 - | hypothetical protein CJE1434 1343022 - 1342735 - | hypothetical protein CJE1435 1343806 - 1343075 - | DNA-binding protein Roi TERM 1406 1343424 - 1343435 + g 78 -3 -5.60993 | CTTTGATTTTCTACT TGAA GTTT TTCA TTTTTTTCTAAAAGC TERM 1407 1343868 - 1343851 - RH 81 -9.9 -3.16618 | opp_overlap 1343846 1343851, overlap 1343842 1343845 1343844 1343849 AATGAAGACTTAAGA GCCATCT TAAA AGATGGC TTAATTTAAGAAGAA TERM 1408 1343851 - 1343868 + rH 84 -9.9 -3.51232 | opp_overlap 1343842 1343845 1343844 1343851 1343849, overlap 1343846 AATGAAGACTTAAGA GCCATCT TAAA AGATGGC TTAATTTAAGAAGAA TERM 1409 1343965 - 1343975 + rH 70 -5.4 -4.56729 | opp_overlap 1343965, overlap 1343967 GGACCTGCATTCAAA GTCT AAA AGAC TTTTGGTATTTTGGT TERM 1410 1344014 - 1344002 - RH 74 -6.3 -4.39696 | TGGTAAATTAACAAA GCTTT AAA AAAGC CCACTTTCCACACCG TERM 1411 1344081 - 1344060 - RH 84 -10.2 -3.57523 | overlap 1344058 ATGAATATAAGAACA CACTAGCC ATAAAA GGCTAGTG AAGCAATCTAAAAAA CJE1436 1344521 - 1344237 - | hypothetical protein CJE1438 1344721 - 1344518 - | hypothetical protein CJE1437 1344501 - 1344734 + | hypothetical protein CJE1439 1344926 - 1345579 + | hypothetical protein TERM 1412 1345606 - 1345580 - f 82 -6.6 -5.08831 | opp_overlap 1345587, overlap 1345582 CAAGAAAAAAAATAA TTTTTAAGGCGT AAT ACGCCTTAATCA AACAAAATATAATAC TERM 1413 1345604 - 1345582 - f 72 -9.2 -2.73323 | opp_overlap 1345587, overlap 1345580 AGAAAAAAAATAATT TTTAAGGCGT AAT ACGCCTTAAT CAAACAAAATATAAT TERM 1414 1345587 - 1345599 + F 75 -9.1 -3.14211 | opp_overlap 1345582 1345580 AAAAATAATTTTTAA GGCGT AAT ACGCC TTAATCAAACAAAAT CJE1440 1345814 - 1346476 + | signal peptidase I, putative CJE1441 1346482 - 1347135 + | DNA/RNA non-specific endonuclease CJE1442 1347152 - 1347433 + | hypothetical protein TERM 1415 1347441 - 1347456 + T 72 -7.6 -3.72241 | opp_overlap 1347436 1347441 TAGAATAGATGTAAA TGAGGA TCAT TCCTCA TTTAACTCCTTAATC TERM 1416 1347456 - 1347441 - T 72 -7.6 -3.77846 | opp_overlap 1347441, overlap 1347436 TAGAATAGATGTAAA TGAGGA TCAT TCCTCA TTTAACTCCTTAATC CJE1443 1347644 - 1347447 - | hypothetical protein CJE1444 1347981 - 1347562 - | hypothetical protein TERM 1417 1348160 - 1348139 - R 71 -8.7 -2.90075 | overlap 1348144 CTTTGTGTAATTATA GTCAAGGCT TATT AGCCTTGCC CCGCAAAAGCGGGGT CJE1445 1348671 - 1348210 - | hypothetical protein CJE1446 1348778 - 1348671 - | hypothetical protein CJE1447 1350003 - 1348720 - | hypothetical protein CJE1448 1350374 - 1350000 - | hypothetical protein CJE1449 1350750 - 1350367 - | hypothetical protein CJE1450 1351382 - 1350747 - | hypothetical protein CJE1451 1351745 - 1351395 - | hypothetical protein CJE1452 1353411 - 1351846 - | hypothetical protein TERM 1418 1352585 - 1352607 + g 86 -7.2 -5.1963 | opp_overlap 1352590, overlap 1352590 AAATCCCCTATAAGT GAAAGTATAA AGT TTATATTTTC TTTTTCTTCATTAAA TERM 1419 1352590 - 1352602 + g 76 -3.5 -5.42605 | opp_overlap 1352590, overlap 1352585 CCCTATAAGTGAAAG TATAA AGT TTATA TTTTCTTTTTCTTCA CJE1453 1354036 - 1353404 - | hypothetical protein CJE1454 1354350 - 1354033 - | phage head-tail adaptor, putative CJE1455 1354677 - 1354363 - | hypothetical protein CJE1457 1355048 - 1354797 - | hypothetical protein CJE1456 1354760 - 1355032 + | hypothetical protein CJE1458 1356225 - 1355059 - | HK97 family major capsid protein CJE1459 1356799 - 1356242 - | hypothetical protein CJE1460 1357754 - 1356885 - | hypothetical protein CJE1461 1363466 - 1357767 - | hypothetical protein TERM 1420 1360916 - 1360932 + g 80 -2.3 -5.71983 | TTTTTTGCATATTTG CTATCAT TTG ATTATAG TTTTTTTCTACTTCG TERM 1421 1363305 - 1363327 + g 72 -2.8 -5.46276 | GTTCATGTCAATTAC GCTTTTTG AAAGTCC TAAAAAGC TTTTTTCTATATCTT CJE1462 1363609 - 1363478 - | hypothetical protein CJE1463 1363592 - 1363864 + | hypothetical protein TERM 1422 1363879 - 1363867 - TR 70 -6.3 -4.14739 | opp_overlap 1363866 1363867 TCATCTATCCTAAAA GACTT AAA AAGTC ATCTTGTAATTTTTT CJE1464 1364071 - 1363856 - | hypothetical protein TERM 1423 1364126 - 1364180 + r 73 -8.9 -2.77113 | gap 3, opp_overlap 1364137, overlap 1364125 1364133 1364137 CTCGCCTATGGTTTT TCCTAATGCAAG-G-GCAA-GGCGAT AAATTA ATCGCCCTTGCTCTCTTGCTTTGGGA CTTCATTTGTAAATT TERM 1424 1364137 - 1364167 + r 75 -8.4 -3.33419 | gap 1, opp_overlap 1364137, overlap 1364133 1364126 1364125 TTTTTCCTAATGCAA GGGCAA-GGCGAT AAATTA ATCGCCCTTGCTC TCTTGCTTTGGGACT CJE1465 1364508 - 1364152 - | hypothetical protein CJE1466 1365485 - 1364505 - | hypothetical protein TERM 1425 1364909 - 1364930 + g 77 -4.5 -5.28778 | GTGTGCTTTCTTTTG GGTAAAAAT AAAT AATTTTACC TTTTTTATCACTCAT TERM 1426 1365078 - 1365094 + g 73 -9.5 -2.62701 | overlap 1365077 TTTATTATTTGCTTC GCTTTGA AGC TCAAAGC CTGTTAATTTCATTT TERM 1427 1365490 - 1365516 + r 86 -8.9 -4.39002 | TCTTTTGACATCTTT TCTCCTTATAT AAGTA ATGTAAGGAGA TTTTATAAAAAGTTT CJE1467 1366007 - 1365657 - | hypothetical protein CJE1468 1366550 - 1366008 - | HK97 family phage protein CJE1469 1367719 - 1366547 - | HK97 family portal protein TERM 1428 1367610 - 1367626 + g 73 -3.7 -5.26907 | overlap 1367612 ATTGCGGCAATTACT GCTGA AAGTTCC TCAGC TTTTATTTTATCTTC TERM 1429 1367880 - 1367901 + r 76 -6.6 -4.62561 | gap 1, overlap 1367881 1367882 GGCTCATTTACGAGT TA-CCCCGC CATGT GCGGGGATA TTATTTTCTTTGTTA TERM 1430 1367881 - 1367899 + r 74 -7.3 -3.87927 | overlap 1367880 1367882 GCTCATTTACGAGTT ACCCCGC CATGT GCGGGGA TATTATTTTCTTTGT TERM 1431 1367882 - 1367898 + r 82 -10.8 -2.90316 | overlap 1367881 1367880 CTCATTTACGAGTTA CCCCGC CATGT GCGGGG ATATTATTTTCTTTG CJE1470 1368313 - 1367879 - | toxin-antitoxin protein, putative TERM 1432 1368121 - 1368109 - G 75 -4.9 -5.10208 | GAACGCCAACAAAAA GATTA ACA TAATC CTCAATGTATATTTT CJE1471 1369993 - 1368368 - | phage terminase, large subunit, putative TERM 1433 1369277 - 1369292 + g 78 -6.2 -4.84527 | ATTTTTAACTTGTTT GCAATA ATCA TATTGC TTTTTCATCTCTCCA TERM 1434 1369918 - 1369928 + g 89 -4 -5.99154 | AAAAGGGCGAGTTTT CAAA TTC TTTG TTTTTTTGTTTAATA CJE1472 1370632 - 1369997 - | phage terminase, small subunit, putative CJE1473 1371233 - 1370883 - | HNH endonuclease domain-containing protein CJE1474 1371510 - 1371220 - | hypothetical protein TERM 1435 1371600 - 1371587 - H 71 -2.5 -5.48787 | overlap 1371598 ATAATATATAAAAAA TAATA AAAC TATTA ATCAAAGATTAAATT TERM 1436 1371891 - 1371902 + H 78 -3 -5.6473 | opp_overlap 1371877, overlap 1371877 ATATCTATTTTATAG GTAT TTAG ATAC TTTTTTTAATATTCT TERM 1437 1372603 - 1372616 + G 78 -6.7 -4.57205 | overlap 1372602 GAGTCTTTATTTTAT CCATC AATG GATGG TTTATTTAAATTTTT CJE1475 1372261 - 1373604 + | TrkH family potassium uptake protein CJE1476 1373615 - 1374265 + | potassium uptake protein TrkA, putative TERM 1438 1374276 - 1374311 + T 78 -3.4 -5.68438 | gap 1, opp_overlap 1374266 1374278, overlap 1374278 ACTAAGCAAGATTTA AAGCCTTGCAAGCCTTT ACA AAACGCTT-TAAGGCTG TTTTTTCTTTGGTAG TERM 1439 1374278 - 1374309 + T 71 -6 -4.47052 | gap 1, opp_overlap 1374266 1374278, overlap 1374276 TAAGCAAGATTTAAA GCCTTGCAAGCCTTT ACA AAACGCTT-TAAGGC TGTTTTTTCTTTGGT CJE1477 1374933 - 1374262 - | hypothetical protein TERM 1440 1374958 - 1374944 - R 77 -8.6 -3.5393 | opp_overlap 1374934 1374944 1374946, overlap 1374934 1374931 ATCATCTCTTTTAAA GAGTGT TAA ACACTC TATCTCCTGCATCTC TERM 1441 1374944 - 1374958 + r 71 -8.6 -2.95774 | opp_overlap 1374934 1374931 1374944, overlap 1374934 1374946 ATCATCTCTTTTAAA GAGTGT TAA ACACTC TATCTCCTGCATCTC upp 1375565 - 1374939 - | uracil phosphoribosyltransferase TERM 1442 1375466 - 1375453 - G 86 -5.3 -5.54079 | overlap 1375426 TCAAAAAGCAAAAAA GATGA AATT TCATC GATTAACATACGAAA CJE1479 1376797 - 1375562 - | NADP-dependent malic enzyme, truncation TERM 1443 1375718 - 1375732 + g 72 -4.3 -5.0133 | TCCAAATTCTAAAGT GCTTA AATTA TAAGC TTTTTTAACCGCATC gltX 1378190 - 1376799 - | glutamyl-tRNA synthetase TERM 1444 1378069 - 1378051 - G 73 -8.2 -3.53761 | opp_overlap 1378043 GAATTTCTTTTTAAA TCCGTATC TTC GATACGAA GTAAAAAATTTCCAC CJE1481 1378255 - 1379070 + | hypothetical protein TERM 1445 1379115 - 1379074 - T 70 -4 -5.10767 | gap 1, opp_overlap 1379080 1379086, overlap 1379080 1379086 TATTTAAGATAAAAA TTACAATTAAAATTTCCCT TTAAT AGGGAAATTTTAA-TGTCT TGCAAGATAATTTGT TERM 1446 1379110 - 1379080 - T 100 -12.9 -3.79689 | opp_overlap 1379080 1379086, overlap 1379074 1379086 AGATAAAAATTACAA TTAAAATTTCCCT TTAAT AGGGAAATTTTAA TGTCTTGCAAGATAA TERM 1447 1379080 - 1379110 + T 100 -12.9 -3.07344 | opp_overlap 1379074 1379080 1379086, overlap 1379086 AGATAAAAATTACAA TTAAAATTTCCCT TTAAT AGGGAAATTTTAA TGTCTTGCAAGATAA TERM 1448 1379086 - 1379104 + T 78 -7.5 -4.43213 | opp_overlap 1379080 1379074 1379086, overlap 1379080 AAATTACAATTAAAA TTTCCCT TTAAT AGGGAAA TTTTAATGTCTTGCA TERM 1449 1379104 - 1379086 - T 78 -7.5 -4.53685 | opp_overlap 1379086 1379080, overlap 1379080 1379074 AAATTACAATTAAAA TTTCCCT TTAAT AGGGAAA TTTTAATGTCTTGCA accC-2 1380438 - 1379107 - | biotin carboxylase accB 1380895 - 1380440 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 1450 1380625 - 1380615 - G 76 -6.8 -4.38712 | CCTACTTTTACAAAA GGTG CTG CACC TGGACTTGGAGCTTG dcd 1381043 - 1381603 + | deoxycytidine triphosphate deaminase TERM 1451 1381794 - 1381806 + G 72 -7.7 -3.69283 | opp_overlap 1381789, overlap 1381801 AATTTGAAATGGCAA GCGTT TTT AACGC TTCTTGCATGCGTTA flmA 1381652 - 1382656 + | polysaccharide biosynthesis protein CJE1486 1382658 - 1383788 + | aminotransferase CJE1487 1383781 - 1385097 + | hypothetical protein TERM 1452 1385613 - 1385600 - g 87 -3.9 -5.88565 | CGCAGAAGAAAAAAA TACAA CTTT TTGTA GATATTTTAAAAATT TERM 1453 1385679 - 1385668 - g 83 -3 -5.74086 | AAAGGAAAGAAAAAA CAAT AACT ATTG ACTACTACGTTAGAG CJE1488 1385094 - 1385879 + | hypothetical protein CJE1489 1385879 - 1386100 + | acyl carrier protein, putative TERM 1454 1386984 - 1386969 - g 100 -7.6 -5.95286 | opp_overlap 1386968 1386971 ATTAAAAACAAAAAA TGCCAT TGTT ATGGCA GTGGTTTTGGAAAAA CJE1490 1386094 - 1387002 + | hypothetical protein TERM 1455 1387672 - 1387660 - g 81 -3.5 -5.55769 | CCTTACAAGAAAAAA TTAAA ACT TTTAA AAAACAAGGCTTTTT TERM 1456 1388252 - 1388274 + G 93 -5.6 -5.84011 | opp_overlap 1388254, overlap 1388254 TATGAGTGATAAATT AAGCGATAGT GGG ATTATCGCTA TTTTTGTTTTTTCTT TERM 1457 1388254 - 1388272 + G 85 -8.2 -4.48934 | opp_overlap 1388254, overlap 1388252 TGAGTGATAAATTAA GCGATAGT GGG ATTATCGC TATTTTTGTTTTTTC CJE1491 1387002 - 1388564 + | HAD family phosphatase CJE1492 1388554 - 1389615 + | 3-oxoacyl-(acyl carrier protein) synthase III CJE1493 1389615 - 1389836 + | acyl carrier protein, putative TERM 1458 1389831 - 1389855 + T 100 -13.1 -4.44915 | opp_overlap 1389828 AATTTAGCAAAGCTT GATTAAAACCT TTA AGGTTTTAATC TTTTATCACTAATTC CJE1494 1390440 - 1389850 - | hypothetical protein CJE1495 1390865 - 1390461 - | hypothetical protein CJE1496 1391138 - 1392646 + | amino acid adenylation domain-containing protein CJE1497 1392639 - 1393364 + | acetyltransferase TERM 1459 1393515 - 1393530 + G 71 -3.4 -5.28983 | TTAAAAATTGCCTTA TTATTA GTGC TAATAA TTTTTATATTTTCAA CJE1498 1393364 - 1394083 + | formyl transferase domain-containing protein CJE1499 1394085 - 1394309 + | acyl carrier protein, putative CJE1500 1394318 - 1395232 + | polysaccharide deacetylase family protein CJE1501 1395229 - 1396227 + | hypothetical protein TERM 1460 1396438 - 1396422 - g 70 -5.8 -4.23213 | GTCATAGGCAATAAA GGCACG CTAAT CATGCC AACCTTTAGCTATAG CJE1502 1396224 - 1396556 + | aminoglycoside N3-acetyltransferase domain-containing protein CJE1503 1396855 - 1397013 + | hypothetical protein CJE1504 1398221 - 1397010 - | hypothetical protein neuA 1398312 - 1399010 + | acylneuraminate cytidylyltransferase TERM 1461 1399101 - 1399113 + G 71 -7.7 -3.46647 | AAGTTTTGCTTGTTT GCCTT TAG AAGGC TCTTTGATCGATGAA TERM 1462 1399606 - 1399591 - g 81 -6.2 -5.09426 | CCTAATCTTAAAAAA TTGCAA AAAT TTGCAA AATTACATAACAATA CJE1507 1398994 - 1399818 + | flagellar protein, putative CJE1508 1399815 - 1400288 + | acetyltransferase hisF-1 1400999 - 1400253 - | imidazoleglycerol phosphate synthase, cyclase subunit TERM 1463 1400504 - 1400519 + g 86 -3.2 -5.94597 | opp_overlap 1400504 CCACAGAAGTTAAAA GAAGCT CTCC AGCTCC TTTTTTTTCATATTC hisH 1401605 - 1401000 - | imidazole glycerol phosphate synthase subunit HisH TERM 1464 1401373 - 1401383 + g 91 -5.4 -5.9873 | opp_overlap 1401373 ATTCCTAAACAAATG CCTA AAA TAGG TTTTTTTTGTACTAA CJE1511 1402738 - 1401602 - | flagellin modification protein, PseA TERM 1465 1402958 - 1402940 - H 72 -6.2 -4.30933 | opp_overlap 1402938 1402940 TATAAATTGAAGAAA TATATAAT ATA ATTATATA TCATTTTAGTCAGGA neuB 1402996 - 1404027 + | N-acetylneuraminic acid synthetase TERM 1466 1404144 - 1404163 + G 74 -5 -5.00884 | opp_overlap 1404160 TCTTTTAATTTTTGG GGACATTT AGAA AAAAGTCC TTTTTTAAAAGACAT TERM 1467 1404176 - 1404160 - g 81 -5.9 -5.29782 | opp_overlap 1404144 GACATTTAGAAAAAA GTCCTTT TTT AAAAGAC ATGGAAGTTGTAAGT TERM 1468 1404820 - 1404808 - g 78 -6.3 -4.74504 | ATTCTAAGGTAAAAA TCATC CAA GATGA GCAAAGATTGCGTCC CJE1513 1404024 - 1404995 + | NAD-dependent epimerase/dehydratase family protein TERM 1469 1405036 - 1405004 - g 74 -5.1 -4.85782 | opp_overlap 1405007 TGTTTGAAAAAGAAA TTTCTTTTATAAAAA GTC TTTTTAATAAAGAAA ATATCGCCCTACATG TERM 1470 1405898 - 1405872 - g 76 -6.1 -4.57569 | gap 1, overlap 1405858 1405875 GGATTTTTTTAAAAA TCA-CGATAAAT GTAA ATTTATCGATGA AAAAAGCAATGAAAA CJE1514 1404988 - 1406133 + | aminotransferase TERM 1471 1406437 - 1406447 + G 70 -5.4 -4.57569 | ATCAATTGTCATGCA GGTA AAC TACC TTTTTACAGGGATAG CJE1515 1406353 - 1406724 + | formyltransferase, putative TERM 1472 1406973 - 1406983 + G 72 -5.4 -4.75309 | GAAATCGCAGCAGAT TCAG GGG CTGA TTTTGTTAAATTTCA TERM 1473 1407379 - 1407365 - g 83 -7.8 -4.56597 | TGTGCTTTGTAAAAA TGGCGC TAA ACGCCA AAATATCACTCTTTT TERM 1474 1407474 - 1407454 - g 93 -11.3 -3.70076 | opp_overlap 1407444 1407454 TTAAAGCCATGCAAA GCTTAAAAG ACG CTTTTAAGC TTGATGTGGGTTATT TERM 1475 1407454 - 1407474 + G 93 -11.3 -3.30854 | opp_overlap 1407454, overlap 1407444 TTAAAGCCATGCAAA GCTTAAAAG ACG CTTTTAAGC TTGATGTGGGTTATT TERM 1476 1407597 - 1407578 - g 70 -4.4 -4.9792 | gap 1 TACTCTAGACAAAAA TATG-TCAG GGC CTGATCATA AAGCAAGTTTAGAAC ptmC 1406883 - 1407887 + | N-acetylneuraminic acid synthetase neuC 1407868 - 1409034 + | UDP-N-acetylglucosamine 2-epimerase CJE1518 1409043 - 1410068 + | nucleotidyltransferase family protein CJE1519 1410065 - 1410970 + | hypothetical protein TERM 1477 1411558 - 1411540 - g 73 -9 -3.14587 | overlap 1411538 TTTTAGAAAATGATA GTGTTTTT GGC AAAAACAC AGGGCTTTTTGTAAT ptmB 1410963 - 1411670 + | posttranslational flagellin modification protein B ptmA 1411670 - 1412440 + | flagellin modification protein A TERM 1478 1412746 - 1412758 + G 76 -6.3 -4.57073 | opp_overlap 1412745 1412746 CAAAATAAAAATCAT CAACA TAT TGTTG TTTTTGAAAAAGATA TERM 1479 1413820 - 1413844 + G 70 -8.7 -2.60714 | opp_overlap 1413821, overlap 1413819 GCAAGGATAGAAGGA ACCATAGAAAA ACC TTTTCTATGGG CTTGTGAGAATTTAC TERM 1480 1413843 - 1413821 - g 100 -12.2 -3.52147 | opp_overlap 1413820 1413819 CAAGGATAGAAGGAA CCATAGAAAA ACC TTTTCTATGG GCTTGTGAGAATTTA TERM 1481 1414245 - 1414211 - g 77 -7.5 -4.24002 | gap 2, opp_overlap 1414221, overlap 1414221 1414238 TTTTAAATCCTAAAA CCAAAGAAGATGCTTTT AAT AAAAGCA--TTCTTTGG ATAAAAGAACATTTA TERM 1482 1414221 - 1414237 + G 79 -8.1 -3.96216 | opp_overlap 1414211 1414221 TAAAACCAAAGAAGA TGCTTTT AAT AAAAGCA TTCTTTGGATAAAAG TERM 1483 1414237 - 1414221 - g 74 -8.1 -3.68988 | opp_overlap 1414221, overlap 1414211 TAAAACCAAAGAAGA TGCTTTT AAT AAAAGCA TTCTTTGGATAAAAG maf-1 1412428 - 1414389 + | motility accessory factor TERM 1484 1415736 - 1415760 + G 70 -8.7 -2.60714 | opp_overlap 1415737, overlap 1415735 GCAAGGATAGAAGGA ACCATAGAAAA ACC TTTTCTATGGG CTTGTGAGAATTTAC TERM 1485 1415759 - 1415737 - g 100 -12.2 -3.52147 | opp_overlap 1415736 1415735 CAAGGATAGAAGGAA CCATAGAAAA ACC TTTTCTATGG GCTTGTGAGAATTTA maf-2 1414365 - 1416245 + | motility accessory factor TERM 1486 1416564 - 1416576 + G 76 -6.3 -4.57073 | opp_overlap 1416564 1416563 CAAAATAAAAATCAT CAACA TAT TGTTG TTTTTGAAAAAGATA maf-3 1416258 - 1418174 + | motility accessory factor maf-4 1418150 - 1420057 + | motility accessory factor TERM 1487 1420085 - 1420060 - T 70 -6.2 -4.18697 | opp_overlap 1420059, overlap 1420061 AAAAGCACTTTAAAA GCTTAGATGC ATAAAA GCATCTAAGA AATTATTGAAGAAGT TERM 1488 1420084 - 1420061 - T 77 -9.7 -3.10134 | opp_overlap 1420059, overlap 1420060 AAAGCACTTTAAAAG CTTAGATGC ATAAAA GCATCTAAG AAATTATTGAAGAAG flaB 1421809 - 1420088 - | flagellin CJE1527 1421912 - 1421811 - | hypothetical protein TERM 1489 1421922 - 1421904 - G 95 -6.7 -5.79595 | opp_overlap 1421904 GTTTAAAATAAAAAA GCCTAGC ATTAA ACTAGGC TTGGATTTATATATA flaA 1423675 - 1421954 - | flagellin maf-5 1425589 - 1423772 - | motility accessory factor maf-6 1427409 - 1425586 - | motility accessory factor CJE1531 1428660 - 1427419 - | hypothetical protein ctsG 1429175 - 1428660 - | transformation system protein gcp 1430183 - 1429176 - | O-sialoglycoprotein endopeptidase TERM 1490 1429402 - 1429426 + g 71 -2.3 -5.43621 | opp_overlap 1429420 CCTACAACGCCAAAA TTTTTAAATTT ATA AAGATTAAAAA TTTTTTCTAATTTAT CJE1534 1431574 - 1430180 - | hypothetical protein dxr 1432646 - 1431576 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase cdsA 1433368 - 1432643 - | phosphatidate cytidylyltransferase TERM 1491 1433167 - 1433143 - G 71 -5.7 -4.43755 | ATAACAAAGCTAAAA TCCCAAAAAGC AAA GCTTTATGCGA CAAACTTCCCAAAAT TERM 1492 1433223 - 1433239 + g 70 -8.1 -3.05816 | opp_overlap 1433223 GAGATATTTTCTAAA GCAAAAA GTT TTTTTGC TTCACTAAAAGATAG TERM 1493 1433239 - 1433223 - G 74 -8.1 -3.57119 | opp_overlap 1433223 GAGATATTTTCTAAA GCAAAAA GTT TTTTTGC TTCACTAAAAGATAG TERM 1494 1433305 - 1433294 - G 74 -3 -5.35222 | overlap 1433283 AAAATTGATAAAAAA TTGA TCAA TCAA CGCGATAATAATAAT CJE1537 1433715 - 1433377 - | hypothetical protein TERM 1495 1433633 - 1433649 + g 71 -8 -3.524 | overlap 1433615 GCAAAACCTTCTTTT GCAAGC TCATT GCTTGC TTGTGTAGCTGGATA CJE1538 1435024 - 1433717 - | fibronectin/fibrinogen binding protein, putative TERM 1496 1434040 - 1434052 + g 70 -6.3 -4.08058 | overlap 1434040 AATAAAAATTTACCA CAAGA TCT TCTTG TTTATGATCTTGATT TERM 1497 1434957 - 1434969 + g 72 -2.7 -5.40072 | opp_overlap 1434966 TTGTCATTGATACGC TTGAT AAA ATCGA TTTTTTTAAACCGAG CJE1539 1435086 - 1435661 + | putative molybdopterin-guanine dinucleotide biosynthesis protein TERM 1498 1435893 - 1435880 - g 78 -3.1 -5.54403 | overlap 1435874 AAAAAAGAAGAAAAA CAAGA CTTT TCTCG CTTAGCTTTGGCTAA TERM 1499 1436317 - 1436329 + G 76 -3.5 -5.47159 | TGTATCTACTGCTAT TTTAT ATA ATAAA TTTTTATTTGTTCCA pldA 1435658 - 1436647 + | phospholipase A ceuB 1436733 - 1437701 + | enterochelin ABC transporter, permease protein ceuC 1437694 - 1438632 + | enterochelin ABC transporter, permease protein ceuD 1438629 - 1439384 + | enterochelin ABC transporter, ATP-binding protein TERM 1500 1439417 - 1439429 + T 75 -3.4 -5.50499 | AAAATCTTTAGTTTT TGCA TTTTT TGCA TTTTTTTAAGTCTAA TERM 1501 1439739 - 1439729 - T 77 -5.4 -4.91473 | CAATTTAAAAACAAA CCTA GTG TAGG TGGAGTACAACAAGT TERM 1502 1440504 - 1440526 + T 77 -8.4 -3.54424 | overlap 1440507 GAGACCCGTTAAGAT CTGCACCCTT AGC AGGGGTGTGG TTTCAGCCGCTCACC TERM 1503 1440507 - 1440523 + T 71 -8.7 -2.90813 | overlap 1440504 ACCCGTTAAGATCTG CACCCTT AGC AGGGGTG TGGTTTCAGCCGCTC TERM 1504 1440613 - 1440585 - T 72 -3.1 -5.29742 | overlap 1440588 1440590 ATACAAAAAAATAAA TAATACCTAGCTT AAA AAGCTAGGAAAAA TCAAAGGCCAAGATA TERM 1505 1440610 - 1440588 - T 91 -9.2 -4.65305 | overlap 1440585 1440590 CAAAAAAATAAATAA TACCTAGCTT AAA AAGCTAGGAA AAATCAAAGGCCAAG TERM 1506 1440608 - 1440590 - T 100 -11.8 -3.8648 | overlap 1440588 1440585 AAAAAATAAATAATA CCTAGCTT AAA AAGCTAGG AAAAATCAAAGGCCA CJE1545 1441168 - 1440614 - | hypothetical protein TERM 1507 1441295 - 1441277 - R 100 -9.6 -5.84011 | AATAAAAAAGAAAAA GCCCCATA ATT TATAGGGC TTAAGAATTATTTTT nrfA 1443135 - 1441303 - | cytochrome c552 TERM 1508 1441668 - 1441683 + g 76 -6.2 -4.56736 | overlap 1441659 1441674 TTTGAGCTTTACGAT GAAGTT CTAA AACTTC TTTTAGTTCTTCGCT TERM 1509 1443015 - 1443002 - G 71 -2.3 -5.38326 | overlap 1443003 CTAAGCAAAGAAAAA TCAGC ATTT GCTGC AATGGCATTTTTATT nrfH 1443665 - 1443150 - | cytochrome c-type protein nrfH TERM 1510 1443254 - 1443273 + g 73 -5.8 -4.64334 | gap 1, opp_overlap 1443254 1443253 CTGTTTGAGCAAAAT CTGCATGAC AGC GT-ATGCAG TTTTCTTGCACCATT ppk 1443853 - 1445937 + | polyphosphate kinase TERM 1511 1445940 - 1445966 + T 73 -6.7 -4.17987 | opp_overlap 1445929 1445934 1445940, overlap 1445934 1445937 CAAAGAAAACTAAAA GTTTTTAGGGT TTTTT ACTCTAAAGAC TTATTTACTTGTTTG TERM 1512 1446010 - 1445992 - T 100 -11.8 -5.24129 | GTTTGTTATAAAAAA GGGCTTTA AGA TAAAGCCC TAGGAGATTTCGCAT TERM 1513 1446283 - 1446297 + T 71 -8.6 -2.82516 | overlap 1446285 AGAAAGCATTATTTA CAGCTA GGT TAGCTG TGTAATCATCACCAC TERM 1514 1447218 - 1447228 + T 73 -4 -5.33405 | opp_overlap 1447218 CATTAGCACTAAGAT TTCA ATT TGAA TTTTTATTTACTAAA CJE1550 1447705 - 1447310 - | hypothetical protein CJE1551 1448118 - 1447900 - | hypothetical protein CJE1552 1448358 - 1448158 - | hypothetical protein TERM 1515 1448337 - 1448347 + g 76 -5.4 -5.14163 | AGCTTAGCAATATCT TGCT CGA AGCA TTTTTCTTCATAAGT CJE1553 1449375 - 1448923 - | hypothetical protein TERM 1516 1449710 - 1449695 - g 74 -3.2 -5.39721 | opp_overlap 1449695 CTATGATAGAAAAAA GCGG AGATTTAG CCGC TATTTTAACCAATCT ruvB 1449424 - 1450431 + | Holliday junction DNA helicase B TERM 1517 1450497 - 1450508 + G 75 -4.4 -5.33848 | ATTTCTTTTACTTTA CCTT TTTA AAGG TTTTTTACTTGTAAT CJE1555 1450435 - 1451478 + | hypothetical protein TERM 1518 1451479 - 1451498 + T 100 -10.8 -4.73682 | opp_overlap 1451474 1451479 AAGAATTTAATTTAA CTTGCCTT AAAA AAGGCAAG TTTTATGTTCTAGGC TERM 1519 1451498 - 1451479 - T 85 -10.8 -3.22106 | opp_overlap 1451479, overlap 1451474 AAGAATTTAATTTAA CTTGCCTT AAAA AAGGCAAG TTTTATGTTCTAGGC fumC 1452899 - 1451508 - | fumarate hydratase CJE1557 1456080 - 1452955 - | serine protease glmS 1457879 - 1456083 - | D-fructose-6-phosphate amidotransferase TERM 1520 1456300 - 1456310 + g 78 -4 -5.45813 | CTAGCAATAAGCTCT TCAA CAT TTGA TTTTGTTTTTTCATA TERM 1521 1456994 - 1456980 - G 71 -8.6 -2.82834 | CATTGCAGCATGATA GCTTGT TCC ACAAGC ACAAAGCGTGATTTC CJE1559 1460232 - 1457884 - | GlnD family protein CJE1560 1460376 - 1461440 + | hypothetical protein TERM 1522 1461468 - 1461451 - g 81 -4.9 -5.38249 | ACTAAGGAGAAAAAA TGAGCTT TTTT AAACTCA AAGAAAACAATACGA CJE1561 1461450 - 1462769 + | xanthine/uracil permease family protein CJE1562 1462783 - 1463226 + | putative nucleotide phosphoribosyltransferase CJE1563 1463271 - 1463969 + | VacJ family lipoprotein CJE1564 1463979 - 1464548 + | toluene tolerance protein, putative TERM 1523 1466425 - 1466411 - g 72 -4.2 -5.08169 | opp_overlap 1466413, overlap 1466413 ATAGATCTTAAAAAA CAGCTC AAC GAGCTT GTAAAAAATGATGGA TERM 1524 1466423 - 1466413 - g 72 -6.8 -4.16351 | opp_overlap 1466413, overlap 1466411 AGATCTTAAAAAACA GCTC AAC GAGC TTGTAAAAAATGATG CJE1565 1464548 - 1467019 + | hypothetical protein CJE1566 1467652 - 1467050 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 1525 1467190 - 1467178 - G 72 -4.1 -5.06414 | overlap 1467163 CCTTTGGAATAAAAA GGCTA TCA TAACC AAAACCATTTTCACC TERM 1526 1468398 - 1468378 - g 70 -5.6 -4.29396 | opp_overlap 1468378 1468376, overlap 1468369 AATCACTCATGAAAA TGAAAAAA CTCCT TTTTTTCA TCTTATTAAACAAAA CJE1567 1467818 - 1469119 + | multidrug resistance efflux transporter, putative TERM 1527 1469126 - 1469102 - T 89 -10.9 -3.65786 | overlap 1469096 1469120 AAAGAAGAATTAGAA GGCAAAATTAA GAT CTAATTTTGCC CCGCAAAACCCATTG CJE1568 1470789 - 1469116 - | iron-sulfur cluster-binding domain-containing protein TERM 1528 1470659 - 1470672 + g 71 -3.1 -5.2197 | AAATTAATCTCAGGG GCATA AATT TGTGC TTTTTGATTTTTATC selA 1470867 - 1472189 + | selenocysteine synthase TERM 1529 1472497 - 1472513 + G 74 -6.7 -4.3534 | AATTTTAAAAATTCT TGATATT AAA AATATCA TTTTAGTGCTTAGCA TERM 1530 1473867 - 1473856 - g 71 -3 -5.19261 | AAATTTATTAAAAAA TCAA AGTC TTGA TGTGCAAAGTATGAA selB 1472186 - 1473991 + | selenocysteine-specific elongation factor TERM 1531 1474381 - 1474366 - g 71 -3.3 -5.28826 | AAATTTTACAAAAAA TGCTA AAGCTG TAGCA CAAAAAGAAACCATG CJE1571 1474040 - 1474750 + | hypothetical protein TERM 1532 1474758 - 1474782 + G 73 -3.7 -5.252 | TTAAATAAACCTAAT GTCTAAAATTA CTT TAATTTTAAGC TTTTTTATAGCACTC TERM 1533 1475045 - 1475034 - g 70 -4.4 -4.86133 | TATAGATATGAAAAA GCAT TCTT ATGC CCAAAAAATCACAAC TERM 1534 1475194 - 1475183 - g 72 -4.4 -5.06103 | ACAATTCTCAAAAAA CAAG TCTT CTTG CTAGAACAGCTTATC CJE1572 1474756 - 1475286 + | putative lipoprotein TERM 1535 1475318 - 1475297 - T 75 -7.4 -4.0865 | opp_overlap 1475297, overlap 1475292 TTTAAGAAAAGACAA TCAAGAGT ATAAAA ACTCTTGA TTTTAAGAATTATTA TERM 1536 1475297 - 1475318 + T 75 -7.4 -4.16921 | opp_overlap 1475297 1475292 TTTAAGAAAAGACAA TCAAGAGT ATAAAA ACTCTTGA TTTTAAGAATTATTA fldA 1475822 - 1475331 - | flavodoxin FldA CJE1574 1476517 - 1475822 - | hypothetical protein CJE1575 1476834 - 1476520 - | hypothetical protein TERM 1537 1477455 - 1477441 - g 72 -4.2 -5.1287 | TTCATACTCAAAAAA GAGATC CAA GAACTC ATCTAAGAAGTAATA TERM 1538 1477809 - 1477819 + G 70 -5.4 -4.54727 | GATATAGAAAAACTT GGAT TTA ATCC TTTTGATTTAACAAA katA 1477005 - 1478429 + | catalase TERM 1539 1478466 - 1478427 - f 74 -5.3 -4.86033 | gap 1, opp_overlap 1478430, overlap 1478431 AAAGCTTTAGAAAAA TAATTTTTA-CTTGCCAC TTTTG GTGGCAAACTAAAGATTA TAATAATTAAGGAAA CJE1577 1478486 - 1478956 + | ankyrin repeat-containing protein TERM 1540 1478933 - 1478956 + T 70 -5.5 -4.68528 | opp_overlap 1478931 1478933 ATAAGCCTAAAAATA CTAAAATTT ATCAAA AAATTTTAG TTATTTTTTAAATTT CJE1578 1479613 - 1478957 - | hypothetical protein TERM 1541 1479649 - 1479635 - H 78 -4.4 -5.4505 | opp_overlap 1479635 GCCTTCAATAAAAAA TTAATA TAA TATTAA ATTCTACTCTTTATA TERM 1542 1479989 - 1479976 - g 71 -6.7 -3.98214 | opp_overlap 1479976 ATCAGTTATGATAAA GTGGT TAAA ACCAC TTGCTTTTTAGCTGA CJE1579 1479781 - 1480143 + | endoribonuclease L-PSP, putative TERM 1543 1481414 - 1481400 - f 70 -7.2 -3.60098 | ACTTTGGAGTTGAAA CTATCA CTA TGATAG CACCGATTCAAATCA metC 1481600 - 1482763 + | cystathionine beta-lyase TERM 1544 1482820 - 1482842 + G 88 -7.7 -5.00616 | opp_overlap 1482806, overlap 1482822 ACTAGCAGACTCATG GAGCACGCA AGAAA TGCGTGCTA TTTTTTGCGAACAAA TERM 1545 1482822 - 1482840 + G 95 -10.3 -4.13561 | opp_overlap 1482806, overlap 1482820 TAGCAGACTCATGGA GCACGCA AGAAA TGCGTGC TATTTTTTGCGAACA purB-2 1482773 - 1484140 + | adenylosuccinate lyase TERM 1546 1484285 - 1484297 + G 77 -7.7 -4.12942 | opp_overlap 1484284 1484285 1484296, overlap 1484296 CAAGTAAGGAAGAAT GCGTT TTA AACGC TTTTAAAGCCTTTGA TERM 1547 1485398 - 1485385 - g 70 -5.3 -4.56133 | TTTGAAGAATTAAAA GCTAA ATTT TTAGC CAATGCACAAATTTA TERM 1548 1485465 - 1485440 - g 78 -6.3 -4.75309 | CTAAAGCTAACAAAA TTCTAGATCAA ATCA TCAATCTAGAA AATTTAAACCACTTT CJE1583 1484149 - 1485489 + | MmgE/PrpD family protein TERM 1549 1485520 - 1485494 - f 83 -11.1 -2.60496 | opp_overlap 1485494, overlap 1485493 1485491 1485518 TTTCTTTTTAAATAT TTATCCTTCTT TTTAC AAGAAGGATAA TTTCATTACACTTTT TERM 1550 1485494 - 1485520 + F 95 -11.1 -3.95042 | opp_overlap 1485494 1485493 1485491 1485518 TTTCTTTTTAAATAT TTATCCTTCTT TTTAC AAGAAGGATAA TTTCATTACACTTTT CJE1584 1485571 - 1485795 + | feoA family protein TERM 1551 1486038 - 1486005 - T 74 -2.7 -5.64873 | gap 1, opp_overlap 1486011 GCGAAGAAGAAAAAA TCACACGTCATTTT TTAAATC AAAATGAC-TATGA TGTTATTATTAATGT TERM 1552 1487073 - 1487085 + T 75 -7.7 -4.18782 | overlap 1487075 TGCCAAAATATCGTA TGCCA AAT TGGCA TTTAGTTTGGTTTAT CJE1586 1489122 - 1487629 - | hydrogenase, (NiFe)/(NiFeSe) small subunit family fabI 1489950 - 1489126 - | enoyl-(acyl carrier protein) reductase tpiA 1490625 - 1489954 - | triosephosphate isomerase pgk 1491824 - 1490622 - | phosphoglycerate kinase TERM 1553 1491049 - 1491067 + g 80 -6.8 -4.74539 | opp_overlap 1491049 ATTTTCACTCCTAAA TTTTTACC CTT GGTAAGAA TTTTATTAGCTTCTT gapA 1492825 - 1491827 - | glyceraldehyde 3-phosphate dehydrogenase A nadD 1492885 - 1493430 + | nicotinate (nicotinamide) nucleotide adenylyltransferase CJE1592 1493458 - 1493784 + | hypothetical protein TERM 1554 1493782 - 1493811 + T 76 -6.6 -4.63542 | opp_overlap 1493788, overlap 1493788 AAAAAAGGTAGGGTT TAAAAAGGCTAA ATTTAA TTAGCCTTTTAA TTTTTAGAGATTATC TERM 1555 1493788 - 1493805 + T 74 -5.6 -4.77757 | opp_overlap 1493788, overlap 1493782 GGTAGGGTTTAAAAA GGCTAA ATTTAA TTAGCC TTTTAATTTTTAGAG TERM 1556 1493805 - 1493788 - T 70 -5.6 -4.58395 | opp_overlap 1493788 1493782 GGTAGGGTTTAAAAA GGCTAA ATTTAA TTAGCC TTTTAATTTTTAGAG CJE1593 1494192 - 1493815 - | hypothetical protein algC 1495610 - 1494240 - | phosphomannomutase/phosphoglucomutase fliL 1495732 - 1496268 + | flagellar basal body-associated protein FliL acpS 1496268 - 1496615 + | 4'-phosphopantetheinyl transferase TERM 1557 1496590 - 1496610 + T 93 -10.5 -4.21737 | ATGATAATGGTTTTG CTATAGCCA TAG TGGCTGTAG TTTGATTATTTTCCT CJE1597 1497035 - 1496616 - | hypothetical protein CJE1598 1498393 - 1497032 - | cytochrome P450 family protein TERM 1558 1498348 - 1498316 - G 73 -8.7 -3.14878 | gap 1, opp_overlap 1498315 CCCGTCAAGCCAAGA TCTACGCT-TTAAC AAAAAA GTTAAAAGCGTAGA AGCTTTATTTTTATA CJE1599 1499511 - 1498390 - | hypothetical protein TERM 1559 1499353 - 1499384 + g 74 -6.1 -4.43477 | opp_overlap 1499353 1499352 TCCTTCGCAAGAAAT TTGAAAAAAAGGA AATTGC TCATTTTTTTCAA TTTTACTTAAATCAA kpsS 1500768 - 1499584 - | capsule polysaccharide export protein KpsS kpsC 1502837 - 1500765 - | capsule polysaccharide export protein KpsC CJE1602 1504734 - 1502815 - | capsular polysaccharide biosynthesis protein, putative TERM 1560 1504441 - 1504421 - GR 76 -2.7 -5.61881 | overlap 1504423 TCGCAAAAATAAAAA TTTTTATTT AAT AAATAACAA GAAAGTATATCCTTA CJE1603 1506655 - 1504703 - | capsular polysaccharide biosynthesis protein, putative TERM 1561 1505950 - 1505931 - GR 74 -2.2 -5.65927 | CATGTAAATAAAAAA CAATCA ACTTTAAA TGATTG AGAGAAGGTTTTTAT CJE1604 1508136 - 1506655 - | capsular polysaccharide biosynthesis protein, putative CJE1605 1508863 - 1508138 - | capsular polysaccharide biosynthesis protein, putative TERM 1562 1508507 - 1508521 + g 70 -5.8 -4.2772 | AGCAAAATCAATTGT TTTGTA ATT TACAAA TTTATATTCCTTAGC CJE1606 1510151 - 1508850 - | haloacid dehalogenase-like hydrolase TERM 1563 1508919 - 1508891 - G 77 -7.6 -4.09864 | opp_overlap 1508915 ATCTATTTTGCAAAA TCAAACTGAAAA TATTT TTTACAGTTTGA ATCAAATCTTCATAT CJE1607 1510737 - 1510144 - | hypothetical protein TERM 1564 1510580 - 1510592 + gr 74 -2 -5.63517 | ATTATAGGGATATTT TTCA TAAAT TGAA TTTTTTCTTTAAAAA CJE1608 1511392 - 1510712 - | capsular biosynthesis nucleotidyltransferase, putative gmhA-2 1511985 - 1511380 - | phosphoheptose isomerase CJE1610 1512992 - 1511973 - | capsular biosynthesis sugar kinase, putative TERM 1565 1513002 - 1513012 + r 90 -5.4 -5.74122 | TTTCATCTATTTAAC GGAA TCC TTCC TTTTTTTATCTCATC wcbK 1514020 - 1512989 - | GDP-mannose 4,6-dehydratase TERM 1566 1513266 - 1513276 + g 72 -5.4 -4.84529 | opp_overlap 1513256 1513266, overlap 1513256 1513259 AAAGCTTCCCCACAA GGAA CTT TTCC TTTTTGGCTTTCTAA fcl 1515066 - 1514017 - | GDP-L-fucose synthetase CJE1613 1516688 - 1515078 - | capsular polysaccharide biosynthesis protein, putative CJE1614 1518121 - 1516685 - | hypothetical protein TERM 1567 1516764 - 1516787 + g 78 -6.8 -4.62069 | opp_overlap 1516768 TTAACCACATTGCTA GAAACTTGAA TACA TTCAAGTATC TTTTCTGCTATTTTT CJE1615 1519500 - 1518157 - | capsular polysaccharide biosynthesis glycosyltransferase WcbB, putative CJE1616 1521104 - 1519503 - | capsular polysaccharide biosynthesis protein, putative TERM 1568 1520654 - 1520668 + g 75 -7.2 -4.13963 | overlap 1520653 CATTAAAATTTTCAT CAGATA AAC TATCTG TATTTTTTAAAAAAT TERM 1569 1520843 - 1520862 + g 84 -6.6 -5.18561 | opp_overlap 1520843 1520842 TAAATGATAAAAATT TCTTATTA ACAA TAATAAGA TTTTTTGGATATTTC kpsF 1522048 - 1521101 - | arabinose-5-phosphate isomerase kpsD 1523716 - 1522058 - | capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein TERM 1570 1522348 - 1522320 - G 78 -6.7 -4.62984 | TTATCATACACAAAA GCTCCAGGTAAAG AAA CCTCACCTTGAAC TATGATGAGATTATT kpsE 1524836 - 1523718 - | capsular polysaccharide ABC transporter TERM 1571 1523920 - 1523930 + g 70 -5.4 -4.56775 | opp_overlap 1523908 TAAGCTTTTAAAGCT GCTT CAT AAGC TTTTTGCGCAAAAGT kpsT 1525498 - 1524836 - | capsular polysaccharide ABC transporter, ATP-binding protein kpsM 1526277 - 1525495 - | capsular polysaccharide ABC transporter, permease protein TERM 1572 1525641 - 1525631 - G 72 -2.6 -5.43866 | overlap 1525616 TAATTCTCAAAAAAA TTAA ATC TTAA AAGTTCAAAAATATG TERM 1573 1526079 - 1526069 - G 86 -3.2 -5.88197 | CTAAACATAAAAAAA GGCA TAA TACC TGAAATTAAAAACAT CJE1622 1526756 - 1526349 - | hypothetical protein TERM 1574 1527299 - 1527287 - g 71 -3.4 -5.27399 | opp_overlap 1527287 GAAGATAGCAAAAAA CTTC TTGAT GAAG TTTTAGAACAAATGA CJE1623 1526831 - 1527394 + | hypothetical protein CJE1624 1527430 - 1528119 + | deoxyuridine triphosphatase domain-containing protein TERM 1575 1528466 - 1528448 - g 74 -5.4 -4.95957 | GAAATCAACCAAAAA TATTACCA TTA TGATAATA CAAACGAAGTTTCAA CJE1625 1528121 - 1528834 + | hypothetical protein CJE1626 1529782 - 1528817 - | PP-loop family protein TERM 1576 1529314 - 1529301 - G 74 -5.3 -5.00616 | opp_overlap 1529301, overlap 1529283 TTTTCTTTTAAAAAA GATGA AATT TCATC TTTACTTATAAAGAG TERM 1577 1529561 - 1529571 + g 76 -2.6 -5.63504 | AAATTTAGGAGCGTG TTTT ATG AAAA TTTTTTTATGAAATT TERM 1578 1529737 - 1529763 + g 70 -6.1 -4.05229 | gap 1, opp_overlap 1529736, overlap 1529729 AAAAAGCGAGTAAAT TTTTA-CCCTTT TTTA AAAGGGCTAAAA TTTCATCTTTAATTT yliG 1531091 - 1529772 - | putative tRNA modifying protein TERM 1579 1530735 - 1530754 + g 74 -2.2 -5.50499 | ACTCTGCAAATAAGT CGAATTTG AAAA TAAATTTG TTTTTTTAAGTATCA prfB 1531165 - 1532262 + | peptide chain release factor 2 TERM 1580 1532334 - 1532320 - T 72 -7.8 -3.40925 | opp_overlap 1532320, overlap 1532318 AAAATTAGAAAGATA GCGAGA TTT TCCCGC TTGTTTTATTATCTT CJE1629 1532599 - 1532420 - | hypothetical protein CJE1630 1532637 - 1532771 + | hypothetical protein truD 1533973 - 1532855 - | tRNA pseudouridine synthase D TERM 1581 1533412 - 1533426 + gT 70 -7.2 -3.56366 | TTACATTTTTCATTT TTTTGC CAC GCAAAA TTTCAAGCCCTTCTT CJE1632 1534763 - 1533942 - | thiamine monophosphate kinase CJE1633 1534850 - 1535923 + | hypothetical protein CJE1634 1535920 - 1536303 + | hypothetical protein TERM 1582 1536362 - 1536348 - g 73 -3.6 -5.33848 | ATCACAATGAAAAAA GAAAAA AAT TTCTTC AAAAACAAGAAATTA CJE1635 1536293 - 1536979 + | site-specific DNA methyltransferase, putative flgI 1537038 - 1538084 + | flagellar basal body P-ring protein TERM 1583 1538239 - 1538251 + G 88 -4.1 -5.75342 | opp_overlap 1538219, overlap 1538219 AAAAGAACAAACGGA TGCTT TTG AGGCA TTTTTTTTAAAGCAA CJE1637 1538084 - 1538425 + | hypothetical protein CJE1638 1538488 - 1538685 + | hypothetical protein CJE1639 1538728 - 1539162 + | hypothetical protein flgK 1539172 - 1540998 + | flagellar hook-associated protein FlgK TERM 1584 1540981 - 1541005 + F 88 -12.3 -2.63596 | opp_overlap 1540968, overlap 1540986 ATGCTTGATACCTTA CTAGGGCTTAA ATC TTAAGCTCTAG TAATATCAAATGAAA TERM 1585 1541429 - 1541451 + G 88 -5.7 -5.63517 | opp_overlap 1541422 1541429 ATCAAAACCTTAAAT TCATATTCA AGTTA TGGATATGA TTTTTTCTTTGGAAA CJE1641 1541015 - 1541779 + | hypothetical protein TERM 1586 1541961 - 1541947 - g 70 -8.6 -2.63784 | opp_overlap 1541947, overlap 1541946 AGCAACAAACAAACT CCAAAG CGT CTTTGG TTCTTTTACGGCTAC TERM 1587 1541947 - 1541961 + G 83 -8.6 -4.18506 | opp_overlap 1541947 1541946 AGCAACAAACAAACT CCAAAG CGT CTTTGG TTCTTTTACGGCTAC CJE1642 1541783 - 1542547 + | hypothetical protein ctsF 1543721 - 1542540 - | general secretory pathway protein F ctsE 1545277 - 1543718 - | general secretory pathway protein E TERM 1588 1544828 - 1544817 - G 74 -3 -5.4833 | TCATGTAATAAAAAA TCAA AAAT TTGA CTGATGCAACTTTGA TERM 1589 1544952 - 1544970 + g 70 -3.8 -5.02074 | GCTATCTTTAATTCA TCGGCAAT TGC AGTGTCGA TTTTTTCACAAATCA ctsX 1545854 - 1545267 - | transformation system protein TERM 1590 1545376 - 1545386 + g 74 -5.4 -4.93365 | TGAGCAAAAATCAGC CAAG AAT CTTG TTTTTGCTTGTCAAG ctsP 1546466 - 1545858 - | transformation system protein ctsD 1547871 - 1546459 - | general secretory pathway protein D TERM 1591 1547489 - 1547502 + g 81 -8.1 -4.05902 | overlap 1547493 CTTTGCCTTGGTTTA GCGTC TACA GACGC TTTAGTTATGCTTTG ctsR 1548160 - 1547849 - | transformation system protein CJE1649 1551744 - 1548184 - | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 1592 1548243 - 1548255 + g 88 -5.5 -5.5074 | TAAGCTGTCTATAGC GACGT TGA GCGTC TTTTTTATTGCGTTC TERM 1593 1549824 - 1549860 + g 77 -4.6 -5.28942 | gap 1, opp_overlap 1549832 1549835, overlap 1549832 1549833 GTTTTACGATTTTTT CAACAAATTCAGTGCCT TTAT AGGCATTG-GTTTGTTC TTTTTCTTTAAGCTC TERM 1594 1549832 - 1549853 + g 82 -7.3 -4.8245 | opp_overlap 1549832 1549835, overlap 1549824 1549833 ATTTTTTCAACAAAT TCAGTGCCT TTAT AGGCATTGG TTTGTTCTTTTTCTT TERM 1595 1549833 - 1549852 + g 76 -8.6 -3.4581 | opp_overlap 1549832 1549835, overlap 1549832 1549824 TTTTTTCAACAAATT CAGTGCCT TTAT AGGCATTG GTTTGTTCTTTTTCT TERM 1596 1551702 - 1551686 - G 100 -10.9 -4.28361 | overlap 1551691 GCAACTTCAGTAAAA GCATACG CAG CGTATGC AGCAGCCTCATTTCC CJE1650 1552478 - 1551837 - | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein TERM 1597 1551989 - 1552005 + g 72 -5.1 -4.77719 | overlap 1551990 TATCTAATATTGTAT CGCCTAT CAT ATAGGCA TTTTCTTGAGTTTTA TERM 1598 1551990 - 1552004 + g 76 -8.6 -3.45005 | overlap 1551989 ATCTAATATTGTATC GCCTAT CAT ATAGGC ATTTTCTTGAGTTTT cadF 1553437 - 1552478 - | fibronectin-binding protein TERM 1599 1553554 - 1553538 - R 100 -12.3 -3.99917 | AAAAAATTGTAGAAA GGTGGGA AAA TCCCACC AAAAATATTAACGTT rpsI 1553951 - 1553562 - | 30S ribosomal protein S9 rplM 1554379 - 1553954 - | 50S ribosomal protein L13 TERM 1600 1554465 - 1554425 - R 75 -4.3 -5.26316 | opp_overlap 1554429 1554430, overlap 1554430 1554434 TGATTGTATAAAAAA TAATATTAATTTTTACTTA ATT TAAGTAAAAATAAAGTTTA TATTTCCAAAATTTG TERM 1601 1554460 - 1554430 - R 82 -8.6 -3.96386 | opp_overlap 1554429 1554430, overlap 1554425 1554434 GTATAAAAAATAATA TTAATTTTTACTTA ATT TAAGTAAAAATAAA GTTTATATTTCCAAA TERM 1602 1554430 - 1554460 + r 73 -8.6 -3.19232 | opp_overlap 1554430 1554425 1554434, overlap 1554429 GTATAAAAAATAATA TTAATTTTTACTTA ATT TAAGTAAAAATAAA GTTTATATTTCCAAA TERM 1603 1554456 - 1554434 - R 82 -9.4 -3.57601 | opp_overlap 1554430 1554429, overlap 1554430 1554425 AAAAAATAATATTAA TTTTTACTTA ATT TAAGTAAAAA TAAAGTTTATATTTC CJE1654 1557228 - 1554463 - | ATP-dependent DNA helicase UvrD TERM 1604 1555860 - 1555870 + g 72 -5.4 -4.78572 | TAATTTCTTGGGCTT GGTT TTT AACC TTTTGTTCCTTAGAC CJE1655 1559591 - 1557225 - | hypothetical protein TERM 1605 1558882 - 1558893 + g 83 -3 -5.79595 | overlap 1558891 TCAAAAGATTTGAGT TTCA TTTT TGAA TTTTTTGTTTTAAAA CJE1656 1560109 - 1559588 - | putative lipoprotein CJE1657 1560698 - 1560096 - | hypothetical protein TERM 1606 1560351 - 1560339 - G 71 -7.7 -3.40622 | overlap 1560337 TATCGGCAAAATAGA TCCTG TTC CAGGA TAAGGACTAAGCACA CJE1658 1560796 - 1560695 - | hypothetical protein CJE1659 1561011 - 1560793 - | hypothetical protein ccoP 1561874 - 1561011 - | cytochrome c oxidase, cbb3-type, subunit III TERM 1607 1561524 - 1561542 + g 74 -5.4 -4.93595 | TTGACCCATTGCTAT TTTATCTT CAG GAGATAAA TTTTTAAATTTTTCT ccoQ 1562140 - 1561874 - | cytochrome c oxidase, cbb3-type, subunit IV TERM 1608 1562111 - 1562090 - G 83 -8.9 -4.05788 | overlap 1562100 TGTTGCTAAATCAAA TGTGATTAA ATTT TTAATCACA TCAAAAACTATTGAT ccoO 1562807 - 1562142 - | cytochrome c oxidase, cbb3-type, subunit II ccoN 1564286 - 1562820 - | cytochrome c oxidase, cbb3-type, subunit I TERM 1609 1564107 - 1564091 - G 70 -3.7 -5.1417 | GCATAAAACCAAAAA TCACACC CGA AGTATGA AGTGGTCTAAGTCTT TERM 1610 1564199 - 1564180 - G 75 -7.2 -4.14243 | TATGCCATTTGAAAA GCTATAAG AGTT CCTATAGC CATACCAACAATGCC CJE1664 1565092 - 1564412 - | DNA-binding response regulator CJE1665 1566306 - 1565095 - | sensory box sensor histidine kinase, putative TERM 1611 1566242 - 1566273 + g 100 -13.3 -3.54741 | opp_overlap 1566242 1566239 TTTCCTTGAACATCA GCTCTTGAAAAAA TTGTAT TTTTTTCAAGAGC TTTAAAAAACTGATC TERM 1612 1566273 - 1566242 - G 100 -13.3 -2.73875 | opp_overlap 1566242, overlap 1566239 TTTCCTTGAACATCA GCTCTTGAAAAAA TTGTAT TTTTTTCAAGAGC TTTAAAAAACTGATC CJE1666 1566962 - 1566303 - | hypothetical protein carA 1568077 - 1566959 - | carbamoyl phosphate synthase small subunit TERM 1613 1567156 - 1567170 + g 77 -5.7 -4.9725 | AATTATGATTTTGTG CGGTA ATTTC TACCG TTTTTGTATCAAGAT CJE1668 1568628 - 1568077 - | hypothetical protein TERM 1614 1568147 - 1568157 + g 71 -3.2 -5.22137 | TCGTATTCTTCGCTA CCTG GAA TAGG TTTTGTTTTATAATT CJE1669 1569239 - 1568721 - | hypothetical protein CJE1670 1569660 - 1569232 - | hypothetical protein TERM 1615 1569546 - 1569524 - G 74 -8.5 -3.6106 | opp_overlap 1569524 GGCAATACGCCTAAA CTTTCACAC TCTTG GCGTGAAAG TTCATAAGCTTTTTC purA 1570907 - 1569657 - | adenylosuccinate synthetase TERM 1616 1569944 - 1569926 - G 74 -8.2 -3.5485 | overlap 1569922 CATCTAAAACATCAA GCTTCATC AAA GATAAAGC ATCAAGACCATTAAG CJE1672 1571036 - 1571134 + | hypothetical protein TERM 1617 1572056 - 1572080 + G 72 -2.7 -5.43974 | overlap 1572058 TAAACTCATAGAACT TTCTCCTGCTG TAG CTGTGGGAGCA TTTTTGTTTGGTTTT CJE1673 1571172 - 1572380 + | putative inner membrane protein CJE1674 1572384 - 1572611 + | hypothetical protein TERM 1618 1572600 - 1572623 + T 100 -12.6 -3.31515 | opp_overlap 1572600 1572605 1572617, overlap 1572589 1572605 CTAAGATTTTTAATA CAAAAGCCTT AAAA AAGGCTTTTG TTCTCAAAGCTCTTT TERM 1619 1572623 - 1572600 - T 100 -12.6 -3.06315 | opp_overlap 1572600 1572589 1572605, overlap 1572605 1572617 CTAAGATTTTTAATA CAAAAGCCTT AAAA AAGGCTTTTG TTCTCAAAGCTCTTT TERM 1620 1572618 - 1572605 - T 78 -6.7 -4.66938 | opp_overlap 1572605 1572600 1572589, overlap 1572600 1572617 ATTTTTAATACAAAA GCCTT AAAA AAGGC TTTTGTTCTCAAAGC TERM 1621 1572605 - 1572618 + T 82 -6.7 -4.77165 | opp_overlap 1572600 1572605 1572617, overlap 1572600 1572589 ATTTTTAATACAAAA GCCTT AAAA AAGGC TTTTGTTCTCAAAGC putP 1574096 - 1572627 - | sodium/proline permease TERM 1622 1572904 - 1572918 + g 70 -4.3 -4.87665 | opp_overlap 1572902 1572904 GCATAAGAAACTATA CTCAA AACAC TTGAG TTTTTATCAGTAGAA CJE1676 1577602 - 1574114 - | bifunctional putA protein, putative TERM 1623 1576307 - 1576319 + g 72 -4.1 -5.01497 | overlap 1576308 TAAAAAAAGTTCTTT TTGGA TAT TCCAG TTTTTATCTCCTACT selD 1578755 - 1577733 - | selenide, water dikinase CJE1678 1579337 - 1578765 - | hypothetical protein TERM 1624 1579117 - 1579128 + g 83 -3 -5.75599 | ATATTTACTTCACTA GAAT CAAA ATTC TTTTTTTGTACTTTG TERM 1625 1579450 - 1579423 - R 80 -4.2 -5.48787 | opp_overlap 1579430, overlap 1579425 1579430 ATAATATAGAAAAAA TTTAAAAGCTCA AAAA TGAGCTTTTTTA AAATCTTTTTTTATT TERM 1626 1579430 - 1579443 + r 90 -6.7 -5.10077 | opp_overlap 1579425 1579423 1579430 AGAAAAAATTTAAAA GCTCA AAAA TGAGC TTTTTTAAAATCTTT TERM 1627 1579443 - 1579430 - R 76 -6.7 -4.55016 | opp_overlap 1579430, overlap 1579425 1579423 AGAAAAAATTTAAAA GCTCA AAAA TGAGC TTTTTTAAAATCTTT CJE1679 1581550 - 1579448 - | methyl-accepting chemotaxis protein TERM 1628 1579757 - 1579775 + g 76 -8.9 -3.53012 | ATGTTCTCCAGCACG TGCAGCT TCAAT AGCTGCA TTTAAAGCAAGAAGA TERM 1629 1580025 - 1580039 + g 72 -4.2 -5.13137 | opp_overlap 1580020 TTAGCAAAATTTGAA GAAGCT ACA AGCATC TTTTTAATTTCTTTG TERM 1630 1580472 - 1580450 - G 70 -4.2 -4.95854 | TAAAAAACGGAAAAA TGATTCTAAA GAA CTAAGAATCA CAGGCAATCTAGATG TERM 1631 1581531 - 1581517 - G 76 -3.6 -5.36441 | overlap 1581522 CTGCCACAGAAAAAA TAAGTT TTA AACCTA TATTTAAAGATTTAA CJE1680 1582400 - 1581663 - | molybdate transport repressor fdhD 1583175 - 1582393 - | formate dehydrogenase accessory protein TERM 1632 1583337 - 1583310 - R 74 -7 -4.33739 | opp_overlap 1583335, overlap 1583311 1583313 CAAAAAAGCTTAAAA CTACCGCTATGC AATA ACATAGCGGTTA AAGATTAAATTTTTA TERM 1633 1583336 - 1583311 - R 73 -8.3 -3.18617 | opp_overlap 1583335, overlap 1583310 1583313 AAAAAAGCTTAAAAC TACCGCTATGC AATA ACATAGCGGTT AAAGATTAAATTTTT TERM 1634 1583334 - 1583313 - R 85 -10.9 -3.12962 | overlap 1583311 1583310 AAAAGCTTAAAACTA CCGCTATGC AATA ACATAGCGG TTAAAGATTAAATTT fdhC 1584274 - 1583342 - | formate dehydrogenase, cytochrome b subunit fdhB 1584912 - 1584271 - | formate dehydrogenase, iron-sulfur subunit fdhA 1587713 - 1584909 - | formate dehydrogenase, alpha subunit, selenocysteine-containing TERM 1635 1586881 - 1586893 + g 76 -6.3 -4.67234 | GTATCTTCTAAGCCT TCATC AAA GATGA TTTTTAGCATTCCAT CJE1685 1587904 - 1587713 - | Tat pathway signal sequence domain-containing protein CJE1686 1588580 - 1587879 - | hypothetical protein CJE1687 1588861 - 1588748 - | hypothetical protein nspC 1590045 - 1588897 - | carboxynorspermidine decarboxylase TERM 1636 1590363 - 1590349 - g 72 -6.4 -4.23999 | opp_overlap 1590349 TTAGATCCAAAACAA TTCCCC CAA GGAGAA ATTTTAAAAGCCTTG TERM 1637 1591246 - 1591234 - g 85 -2.7 -5.86609 | CTAAAAAAAGAAAAA TTAGA ACT TCCAA AAAATTTAAAAATTT CJE1689 1590169 - 1591710 + | oxidoreductase, putative CJE1690 1591712 - 1591933 + | thiS family protein CJE1691 1591934 - 1592377 + | molybdopterin converting factor, subunit 2 TERM 1638 1592709 - 1592691 - g 71 -7.6 -3.53779 | TTGGCAAAATATCAA TGAATTTT TTA AAAATTCA AGTCTCCAAAGAAAA CJE1692 1592374 - 1592790 + | hypothetical protein CJE1693 1592793 - 1593983 + | molybdopterin biosynthesis MoeA protein, putative TERM 1639 1594073 - 1594099 + T 95 -9.4 -4.7261 | opp_overlap 1594072 1594069, overlap 1594097 TAGTGGAGTAATTAG CCCTAGCGGAGT TTC AATCCACTAGGG TTTATTTTAGTCCCT cas2 1594912 - 1594481 - | CRISPR-associated Cas2 family protein cas1 1595795 - 1594905 - | CRISPR-associated Cas1 family protein TERM 1640 1595858 - 1595872 + H 71 -5.8 -4.43272 | opp_overlap 1595857, overlap 1595864 AAGTGCTGAAACTAT GTATTT TTC AAATAC TTTTAGATTTTGAAT TERM 1641 1597537 - 1597560 + H 75 -8.4 -3.43511 | opp_overlap 1597540, overlap 1597535 1597540 GCATTAAAGGAGTGA TAAGTTTTAA GGCT TTAAAACTTA TATTTAAATGGTCTT TERM 1642 1597730 - 1597744 + H 72 -4.4 -5.05782 | ATCACCTAAGGCTTT TATAAA TTC TTTATA TTTTTTAAACTCAAT TERM 1643 1598554 - 1598577 + H 70 -8.2 -3.2362 | overlap 1598558 1598565 GTTTTAAGTGATTTA GCCTTGCT TTGCGTCT AGCAAGGC GTTTTCTAGCACTTC TERM 1644 1598769 - 1598799 + H 85 -5.6 -5.40072 | CCTTTTTAATATTTA TGATTTGTGTATAA TTA TAATACAAAAATCA TTTTTTTAAACAAAC TERM 1645 1598908 - 1598869 - H 74 -5.4 -4.80737 | opp_overlap 1598873, overlap 1598873 1598892 1598906 TAATACAAAAAACAA GTAATTTTTAAATAAAAA ATAT TTTTTATTTAAAAATTTA GATAAAATCCAATTT TERM 1646 1598873 - 1598904 + H 89 -10.6 -3.65902 | opp_overlap 1598869 1598873 1598892 ACAAAAAACAAGTAA TTTTTAAATAAAAA ATAT TTTTTATTTAAAAA TTTAGATAAAATCCA TERM 1647 1598904 - 1598873 - H 89 -10.6 -3.81144 | opp_overlap 1598873, overlap 1598869 1598892 ACAAAAAACAAGTAA TTTTTAAATAAAAA ATAT TTTTTATTTAAAAA TTTAGATAAAATCCA CJE1698 1598988 - 1599164 + | hypothetical protein TERM 1648 1599209 - 1599219 + T 77 -5.4 -5.02074 | opp_overlap 1599215 1599216 CATATCAATGCTTCG GCAA AAC TTGC TTTTTTAGCAAATAA TERM 1649 1600346 - 1600374 + T 81 -10.5 -2.57564 | opp_overlap 1600351, overlap 1600351 1600355 TAGAACTTAAAATAA AAAAATAAAGCGT ATG ACGCTTTATTTTC ATTCTAAAACAATAC TERM 1650 1600351 - 1600369 + T 93 -10.4 -4.48987 | opp_overlap 1600351, overlap 1600346 1600355 CTTAAAATAAAAAAA TAAAGCGT ATG ACGCTTTA TTTTCATTCTAAAAC TERM 1651 1600369 - 1600351 - T 100 -10.4 -6.09196 | opp_overlap 1600351 1600346 1600355 CTTAAAATAAAAAAA TAAAGCGT ATG ACGCTTTA TTTTCATTCTAAAAC TERM 1652 1600355 - 1600365 + T 82 -6.8 -4.80487 | opp_overlap 1600351, overlap 1600351 1600346 AAATAAAAAAATAAA GCGT ATG ACGC TTTATTTTCATTCTA purM 1601362 - 1600373 - | phosphoribosylaminoimidazole synthetase coaE 1601423 - 1602028 + | dephospho-CoA kinase TERM 1653 1602555 - 1602533 - gf 70 -5 -4.59853 | opp_overlap 1602533 1602532 TTAATTTTGTAAAAA TTTTAGATGA AAA TCATTTAAAA GTTCGTACCTATGAA dapF 1602025 - 1602774 + | diaminopimelate epimerase CJE1703 1602749 - 1603480 + | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein CJE1704 1604514 - 1603477 - | hypothetical protein TERM 1654 1603809 - 1603830 + g 83 -2.4 -5.88471 | overlap 1603810 TTCTTAGGCCAAAAT CTTTAAAA TAAATC TTTTGAAG TTTTTTTTCATCATG TERM 1655 1604518 - 1604536 + r 77 -9 -3.3573 | AAGTACTTTCAATTT TATCCTTT AAA AAAGGATA TTATAACCTAGTTTG TERM 1656 1604559 - 1604573 + r 73 -8.5 -3.2352 | opp_overlap 1604558 CTAGTTTGTATAATT GGGGC ATAAA GCCCC TTAAATTACATTTTG CJE1705 1605028 - 1604579 - | bacterioferritin, putative TERM 1657 1605112 - 1605057 - R 75 -7.6 -4.14392 | gap 1, opp_overlap 1605057 1605070 1605104 1605105 1605110, overlap 1605070 TTTTAATTTTTAAAA TTATAACATAAAATTCTTAAATAATAA TTA TTATTAATTAAAAATTTT-TATTATAA TTTTAACTTAAAATT TERM 1658 1605100 - 1605070 - R 71 -5 -4.76193 | opp_overlap 1605057 1605070, overlap 1605057 AATTATAACATAAAA TTCTTAAATAATAA TTA TTATTAATTAAAAA TTTTTATTATAATTT pgi 1606375 - 1605155 - | glucose-6-phosphate isomerase galU 1607193 - 1606369 - | UTP-glucose-1-phosphate uridylyltransferase acs 1609248 - 1607275 - | acetyl-CoA synthetase CJE1709 1610382 - 1609387 - | tungsten ABC transporter, ATP-binding protein, putative TERM 1659 1609453 - 1609467 + g 73 -5.8 -4.52873 | opp_overlap 1609444 1609452, overlap 1609444 GTATAATTTTAAATC GAATTT TAA AAATTC TTGTTTTTCTAAGGC TERM 1660 1609959 - 1609970 + g 75 -4.4 -5.24449 | opp_overlap 1609959 TTACGCTTAAAGCTA TAGC AAAA GCTA TTTTTTGACTTTGTC TERM 1661 1609984 - 1610005 + g 73 -8.1 -3.54146 | overlap 1609982 1609988 TATTTTTTGACTTTG TCCTGATGA AAGT TCATTAGGA TGTTTACTTAAAAGA CJE1710 1611070 - 1610384 - | tungstate ABC transporter, permease protein, putative TERM 1662 1611093 - 1611118 + H 100 -6.3 -5.72616 | opp_overlap 1611095, overlap 1611095 CTTTTTAAAATAAGT AATTTTAGCAT AATT ATGCTAAAATA TTTTTTTATGTAAAT TERM 1663 1611095 - 1611116 + H 86 -8.9 -4.50122 | opp_overlap 1611095, overlap 1611093 TTTTAAAATAAGTAA TTTTAGCAT AATT ATGCTAAAA TATTTTTTTATGTAA TERM 1664 1611116 - 1611095 - H 81 -8.9 -3.68798 | opp_overlap 1611095 1611093 TTTTAAAATAAGTAA TTTTAGCAT AATT ATGCTAAAA TATTTTTTTATGTAA CJE1711 1611149 - 1611958 + | tungstate ABC transporter, periplasmic tungstate-binding protein, putative TERM 1665 1611985 - 1611962 - f 100 -12.6 -4.99972 | opp_overlap 1611960 1611958 AGAAAAGACTAAAAA TTAAGCAGGT TTTA ACCTGCTTAA AATATCATTTTTTAC TERM 1666 1612440 - 1612430 - g 74 -8.2 -3.63336 | opp_overlap 1612429 1612426 ATACAGCATTGTAAA GCCC ATG GGGC GCTTTATAATATGGC CJE1712 1612100 - 1612867 + | hypothetical protein TERM 1667 1613249 - 1613231 - g 70 -6 -4.25676 | AATCAAATTTCAAAA GAAGAGCT TAT ATCTCTTC ACACTAAACCTTATT TERM 1668 1613509 - 1613488 - g 76 -2.9 -5.6473 | opp_overlap 1613489 1613496, overlap 1613489 AGAAGATGAAAAAAA TCCCACTCT TTTA AAAGCGGGT ATGTTTTTAAAATTT CJE1713 1612877 - 1613617 + | hypothetical protein TERM 1669 1613746 - 1613725 - g 73 -8.1 -3.43751 | overlap 1613723 TAAGAATGGCAAATA TCTTGCTTG GAAA CAAACAAGA TGAAGCAGGAATTGA TERM 1670 1613978 - 1613968 - g 70 -4 -4.8622 | GCTTTGAAGTAAAAA GTTT TTT AAAC TCTAAATCCAGTGAT CJE1714 1613598 - 1614563 + | hypothetical protein CJE1715 1615456 - 1614560 - | integral membrane protein TERM 1671 1614897 - 1614919 + g 91 -9.9 -4.05446 | opp_overlap 1614895 1614892 ATATAAAAGTTAATC GCCAAAGGG TGAGC TCCTTTGGC TTTATGATTAAACAC TERM 1672 1615486 - 1615496 + r 71 -2.6 -5.45726 | opp_overlap 1615485 1615486, overlap 1615485 ATTTTTAAGTCAAAT TTTT TAA AAAA TTTTTTTCAAGTGTA CJE1716 1616067 - 1615489 - | flavodoxin-like fold domain-containing protein CJE1717 1616167 - 1616514 + | transcriptional regulator, putative CJE1719 1618030 - 1616954 - | zinc-binding dehydrogenase family oxidoreductase TERM 1673 1617098 - 1617084 - G 75 -4.3 -5.27335 | opp_overlap 1617084 TGTTTTAAAGAAAAA TCAAG CATTT CTTGA GTTTCTGCGATCCCG TERM 1674 1617348 - 1617361 + g 83 -2.3 -5.85244 | GAACTCACGCCCATA GCCAA AGCA TCGGC TTTTTTGTTTTCATT CJE1721 1620475 - 1622805 + | RloC protein, putative TERM 1675 1624042 - 1624072 + F 82 -4.3 -5.70829 | opp_overlap 1624023, overlap 1624023 AACACATTGGCTTGA TATGTTAAAAA TTTTTGATT TTTTTAACATA TTTTTTTATAATGTT CJE1723 1624123 - 1625193 + | MloA protein, putative hsdM 1625194 - 1626678 + | type I restriction-modification system, M subunit CJE1725 1627139 - 1626756 - | 4-carboxymuconolactone decarboxylase, putative TERM 1676 1627273 - 1627257 - gR 88 -5.9 -5.28826 | AAAGTTTATAAAAAA GAGCATT TAA AATACTC CAAAAAAACATAAAA CJE1726 1627119 - 1627286 + | hypothetical protein TERM 1677 1627277 - 1627313 + Tr 81 -9.1 -3.671 | opp_overlap 1627282, overlap 1627282 1627290 TTTAAAATACTCCAA AAAAACATAAAAGTTTT TAT AAAATTTTTATGTTTTA TTTACAAATTTCTTT TERM 1678 1627308 - 1627282 - TR 100 -6.8 -5.46629 | opp_overlap 1627277 1627282 1627290 AATACTCCAAAAAAA CATAAAAGTTTT TAT AAAATTTTTATG TTTTATTTACAAATT TERM 1679 1627282 - 1627308 + Tr 93 -9 -4.88405 | opp_overlap 1627282, overlap 1627277 1627290 AATACTCCAAAAAAA CATAAAAGTTTT TAT AAAATTTTTATG TTTTATTTACAAATT CJE1727 1627746 - 1627327 - | hypothetical protein CJE1728 1628979 - 1627804 - | transporter, putative TERM 1680 1628387 - 1628370 - G 75 -7.1 -4.13767 | opp_overlap 1628370, overlap 1628373 GTGGGTATCTTAAAA TAAGCAA TTGT TTGCTTA TTTTTACAGAATTTA TERM 1681 1628370 - 1628387 + g 81 -7.1 -4.60924 | opp_overlap 1628370 1628373 GTGGGTATCTTAAAA TAAGCAA TTGT TTGCTTA TTTTTACAGAATTTA TERM 1682 1629153 - 1629120 - H 100 -14.2 -4.6951 | opp_overlap 1629120 1629125, overlap 1629125 AGCATTTAAAAGAAA TAAAAGATGCCTTA AAAGCA TAAGGCATCTTTTA TTTATAGGCTTATTA TERM 1683 1629120 - 1629153 + H 100 -14.2 -3.95051 | opp_overlap 1629120 1629125, overlap 1629125 AGCATTTAAAAGAAA TAAAAGATGCCTTA AAAGCA TAAGGCATCTTTTA TTTATAGGCTTATTA TERM 1684 1629125 - 1629148 + H 100 -9.7 -4.99645 | opp_overlap 1629125 1629120, overlap 1629120 TTAAAAGAAATAAAA GATGCCTTA AAAGCA TAAGGCATC TTTTATTTATAGGCT TERM 1685 1629148 - 1629125 - H 100 -9.7 -5.26247 | opp_overlap 1629120 1629125, overlap 1629120 TTAAAAGAAATAAAA GATGCCTTA AAAGCA TAAGGCATC TTTTATTTATAGGCT TERM 1686 1629895 - 1629858 - H 100 -12.5 -4.16284 | opp_overlap 1629862, overlap 1629846 1629862 ATATCGTTTAAGAAA CAAATTAATATATCAAT ATAT ATTGATATATTAATTTA TATATGTTATATTTT TERM 1687 1629891 - 1629862 - H 100 -11.1 -4.67607 | opp_overlap 1629862, overlap 1629858 CGTTTAAGAAACAAA TTAATATATCAAT ATAT ATTGATATATTAA TTTATATATGTTATA TERM 1688 1629862 - 1629891 + H 95 -11.1 -4.22949 | opp_overlap 1629862 1629858 CGTTTAAGAAACAAA TTAATATATCAAT ATAT ATTGATATATTAA TTTATATATGTTATA TERM 1689 1630727 - 1630715 - g 72 -7.7 -3.54741 | opp_overlap 1630722 TAGCACTTTTGCAAA TGGGA ATT TCCCA AGGAGTGATTATGAG TERM 1690 1630808 - 1630818 + G 76 -2.6 -5.50774 | opp_overlap 1630801 1630808, overlap 1630801 1630802 AACAAATGTTTAAAA TAAA ATT TTTA TTTTTATTTGTTATG CJE1730 1629937 - 1630884 + | permease, putative arsR 1630894 - 1631211 + | arsenical resistance operon repressor arsC 1631208 - 1631630 + | arsenate reductase CJE1733 1631624 - 1632667 + | arsenical-resistance protein, putative TERM 1691 1632671 - 1632651 - f 71 -2.5 -5.49809 | opp_overlap 1632652, overlap 1632652 TAAATTCTAAAAAAA TGAATCAAG CCT CATGATTCT TTACAAAACTTATCG TERM 1692 1633109 - 1633130 + F 91 -6.1 -5.67063 | opp_overlap 1633109 1633115 TTCTCCTTTTTAAAA TAAAAATAA AAAT TTATTTTTA TTTTTTTGTGATAAA TERM 1693 1633130 - 1633115 - f 75 -3.4 -5.45802 | opp_overlap 1633109, overlap 1633109 TTTTTAAAATAAAAA TAAAAA TTTA TTTTTA TTTTTTTGTGATAAA TERM 1694 1634591 - 1634576 - g 72 -6.2 -4.28049 | GTTAAAATGCTAAAA CAAAGT TCAG ACTTTG CTAATGCCTTAGCTA CJE1735 1633202 - 1635157 + | methyl-accepting chemotaxis protein pflA 1637566 - 1635200 - | paralyzed flagella protein PflA TERM 1695 1636590 - 1636573 - G 76 -9.9 -2.64155 | overlap 1636570 TCTTTGCCAAACTCA TAGCTGC TCTT GCAGCTA AATCTAAATTTTTTG TERM 1696 1637216 - 1637194 - G 81 -7.2 -4.56597 | overlap 1637199 GTTCTGGTGTAAAAA TAAAAGTAAA AGC CTTACTTTTA TGCGAACTTGATGAA nuoN 1638976 - 1637588 - | NADH-quinone oxidoreductase, N subunit nuoM 1640453 - 1638966 - | NADH-quinone oxidoreductase, M subunit TERM 1697 1639430 - 1639415 - G 72 -4.8 -4.88293 | opp_overlap 1639413 1639415 AATGGTAAAAAGAAA TATCAT AAGT ATGATA TCTTTGGTATAAAAG TERM 1698 1639976 - 1639958 - G 71 -6.8 -3.90729 | AATAAGCTTGATAAA TCAATGCT ACA AGCATTAA AATTGAACCCGCAAA nuoL 1642245 - 1640455 - | NADH dehydrogenase subunit L nuoK 1642543 - 1642247 - | NADH-quinone oxidoreductase, K subunit nuoJ 1643058 - 1642540 - | NADH dehydrogenase subunit J nuoI 1643696 - 1643055 - | NADH dehydrogenase subunit I nuoH 1644704 - 1643706 - | NADH dehydrogenase subunit H nuoG 1647159 - 1644697 - | NADH dehydrogenase subunit G TERM 1699 1644863 - 1644886 + g 75 -4 -5.20783 | TCTTTTATTTTAAGT TTTACAAGAT CTTT ATCTTTTAAA TTTTTCTCTTTAGCT CJE1745 1647848 - 1647156 - | hypothetical protein TERM 1700 1647593 - 1647577 - G 80 -6.5 -5.00884 | opp_overlap 1647577 ACCTCTTTTAAAAAA GCAAGCA CTT CGCCTGC TTCTTCCTCTCCAAA CJE1746 1648072 - 1647845 - | hypothetical protein nuoD 1649295 - 1648069 - | NADH dehydrogenase subunit D TERM 1701 1648559 - 1648539 - G 71 -6.9 -3.97834 | opp_overlap 1648538 CAACTTCATTATAAA GCAAATAAG GCT CTTCTTTGC GTATATCGTATTTTA TERM 1702 1649028 - 1649042 + g 76 -10 -2.84173 | opp_overlap 1649027 1649025 1649024 AATAAGCATAATTAT TCGCTG AAG CAGCGA TATAGTCCATTCTAT nuoC 1650088 - 1649297 - | NADH dehydrogenase subunit C nuoB 1650591 - 1650088 - | NADH dehydrogenase subunit B nuoA 1650962 - 1650573 - | NADH dehydrogenase subunit A TERM 1703 1650919 - 1650896 - G 83 -3.2 -5.78622 | CCAGTCCAAAAAAAA TAACACTAGC AAGT ACTAGCATTA AAAAAATACCAAAAT CJE1751 1651740 - 1651075 - | peptide ABC transporter, ATP-binding protein CJE1752 1652443 - 1651733 - | peptide ABC transporter, ATP-binding protein CJE1753 1653228 - 1652440 - | peptide ABC transporter, permease protein CJE1754 1654165 - 1653221 - | peptide ABC transporter, permease protein TERM 1704 1653303 - 1653293 - G 79 -5.4 -5.30575 | TAAAAATGTAAAAAA TGCT GCA AGCA AAACGCTAAAAAATA TERM 1705 1654011 - 1653999 - G 74 -7.7 -3.72893 | opp_overlap 1653998 TACTGCTCTAGCAAA GGCTT ATC AAGCC CTAAATTTTGTTCTA CJE1755 1655700 - 1654165 - | peptide ABC transporter, periplasmic peptide-binding protein TERM 1706 1655742 - 1655732 - R 74 -2.6 -5.79588 | TTAAAATTAAAAAAA TTAT AAA ATAA AAAATAAGAAGCCAC CJE1756 1658580 - 1655809 - | oxidoreductase, FAD-binding, iron-sulfur cluster-binding TERM 1707 1657076 - 1657091 + g 85 -2.6 -5.84381 | opp_overlap 1657068, overlap 1657074 AATAAACTATCCTTA TCAAAG ATAC TTTTGA TTTTTTTATTGATCA TERM 1708 1658184 - 1658204 + g 81 -2.5 -5.7946 | opp_overlap 1658184, overlap 1658192 TTAAAGCTGAATTTA TAGTAGCTG GAT CAGGTCCTA TTTTTTTCTTCAAAA CJE1757 1658732 - 1659154 + | flavohemoprotein, truncation TERM 1709 1659176 - 1659155 - T 73 -6.7 -4.11183 | gap 1, opp_overlap 1659160, overlap 1659160 CTCTATGATAAATAA TATAAGCCCA TTT TGGGCTT-TA ATCAAATTTTTCTAC TERM 1710 1659172 - 1659160 - T 83 -9.1 -3.93744 | opp_overlap 1659160, overlap 1659155 TGATAAATAATATAA GCCCA TTT TGGGC TTTAATCAAATTTTT TERM 1711 1659160 - 1659172 + T 81 -9.1 -3.79623 | opp_overlap 1659160 1659155 TGATAAATAATATAA GCCCA TTT TGGGC TTTAATCAAATTTTT CJE1758 1660805 - 1659174 - | multidrug transporter membrane component/ATP-binding component TERM 1712 1659314 - 1659343 + g 71 -7.4 -3.73995 | gap 1, overlap 1659326 TGATAGCAAAGATTG TTTTACC-TTGCT CTTTT AGCAAAGGTAAAA GTTTTTTATAAAAAA TERM 1713 1659326 - 1659344 + g 77 -4.6 -5.24129 | overlap 1659314 TTGTTTTACCTTGCT CTTTTAGC AAA GGTAAAAG TTTTTTATAAAAAAA TERM 1714 1659736 - 1659724 - G 75 -4.8 -5.07941 | opp_overlap 1659724 AAAAGCATACAAAAA GTGG ATTTA CCAC TTCCATTTTTACCTA TERM 1715 1659832 - 1659844 + g 85 -4.9 -5.53288 | opp_overlap 1659841 TAAGCAAATTGAGTA TTTCT AAA AGAAA TTTTTTTCCATTCGC TERM 1716 1660330 - 1660318 - G 73 -3.5 -5.1861 | TTCATCATCAAAAAA TTATT AGT AATAA AAATAACCATAATCC CJE1760 1662239 - 1662583 + | hypothetical protein CJE1761 1662616 - 1663035 + | metallo-beta-lactamase domain-containing protein infA 1663123 - 1663341 + | translation initiation factor IF-1 rpmJ 1663513 - 1663626 + | 50S ribosomal protein L36 rpsM 1663629 - 1663994 + | 30S ribosomal protein S13 rpsK 1664004 - 1664396 + | 30S ribosomal protein S11 rpsD 1664424 - 1665050 + | 30S ribosomal protein S4 rpoA 1665063 - 1666076 + | DNA-directed RNA polymerase subunit alpha rplQ 1666080 - 1666433 + | 50S ribosomal protein L17 TERM 1717 1666456 - 1666439 - f 88 -9.9 -3.91911 | opp_overlap 1666439 TGTAGCTTAATCAAA TCCTAGC TTTT GCTAGGA TTAATACTTCAATTA TERM 1718 1666439 - 1666456 + F 81 -9.9 -3.28984 | opp_overlap 1666439 TGTAGCTTAATCAAA TCCTAGC TTTT GCTAGGA TTAATACTTCAATTA TERM 1719 1666965 - 1666951 - g 77 -5.8 -4.87892 | opp_overlap 1666950, overlap 1666952 CCTCAAGAAAATAAA TTTCAA AAT TTGAAA GATTTTGAAGGCTTA TERM 1720 1667333 - 1667316 - g 79 -5.6 -5.07652 | overlap 1667327 TGCTCCAAAAGAAAA GCTTGA TAAAAT TCAAGC CCTACTTCCAGGAGT TERM 1721 1667402 - 1667391 - g 78 -3 -5.56568 | opp_overlap 1667391 ACACGATGAAAAAAA TGTA GCTT TACA TATGGTAAGTAAAGA hisG 1666606 - 1667505 + | ATP phosphoribosyltransferase TERM 1722 1667572 - 1667561 - g 71 -5.8 -4.42156 | overlap 1667570 AAACAAAAAGAAGAA GCGT TAAA ACGC CCTGCTATAAGTGCG TERM 1723 1667945 - 1667961 + G 87 -10.9 -3.2963 | TTAATGCTAGCTATT CCTGCAA AAA TTGCAGG TTGTGAAAAAATCGT TERM 1724 1668405 - 1668374 - g 74 -8.2 -3.55181 | gap 1, opp_overlap 1668399, overlap 1668389 CAAAGTCAATTAGAA CTTTTGCCTCGCAAA GAA CTTGCAA-GCAAAAG CATTGCTAATTCACG hisD 1667513 - 1668799 + | histidinol dehydrogenase TERM 1725 1668970 - 1668983 + G 72 -6.7 -4.07568 | opp_overlap 1668961 1668960 1668979 AGCAATCAAGACGGT CTTGG AACA CCAAG TTTTCCAAAGGAAAA TERM 1726 1668984 - 1668998 + G 75 -7.2 -4.14739 | opp_overlap 1668983 1668979 1668984 TCTTGGAACACCAAG TTTTCC AAA GGAAAA TTTTGAAATCGCTCA hisB 1668796 - 1669854 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 1669851 - 1670438 + | imidazole glycerol phosphate synthase subunit HisH TERM 1727 1670527 - 1670516 - g 88 -3 -6.13503 | TACGAACAAAAAAAA GTAT ATAA ATAC AATCCCTTAAAGAAA hisA 1670435 - 1671166 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase CJE1774 1671151 - 1672089 + | HrgA protein TERM 1728 1672177 - 1672164 - g 72 -5.3 -4.8066 | overlap 1672171 AACACAATTTAAAAA CCATA AAGA TATGG GAGATATCATAGAGC hisF-2 1672090 - 1672857 + | imidazole glycerol phosphate synthase subunit HisF TERM 1729 1672900 - 1672890 - g 71 -3.2 -5.29385 | AACTTAATGAAAAAA TCGC TTG GCAA AAAGTGGATAATCTT hisI 1672859 - 1673482 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 1730 1673493 - 1673469 - T 93 -8.7 -4.86613 | overlap 1673471 CAAAATTAAAAGAAA GACATAAAGCT TAA AGCTTTATGTA AAATAAATTTATATC TERM 1731 1673491 - 1673471 - T 95 -11.3 -4.00914 | overlap 1673469 AAATTAAAAGAAAGA CATAAAGCT TAA AGCTTTATG TAAAATAAATTTATA CJE1777 1674667 - 1673507 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative mrp 1675799 - 1674693 - | ATP/GTP-binding protein TERM 1732 1676132 - 1676119 - g 72 -5.3 -4.79667 | AAAATTTACTAAAAA CTATG AATT CATAG AAGGTGGCGATACCA ispDF 1675922 - 1677037 + | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein CJE1780 1677034 - 1677921 + | DNA-binding response regulator, putative CJE1781 1677899 - 1679059 + | ATP-sulfurylase family protein pgpA 1679064 - 1679564 + | phosphatidylglycerophosphatase A rpsT 1679643 - 1679906 + | 30S ribosomal protein S20 TERM 1733 1680279 - 1680289 + G 70 -5.4 -4.55295 | GCAGGCGCAGGTGGC GATG AGG CATC TTTATTTGTAGGAGA prfA 1679925 - 1680992 + | peptide chain release factor 1 CJE1785 1681761 - 1681006 - | hypothetical protein TERM 1734 1681523 - 1681544 + g 73 -9.5 -2.59185 | overlap 1681522 1681520 CTAAAATTTTGCTCA CTCTTTGCA CTCA TGCAAAGGG ATATTATAGTATCTT chuA 1681954 - 1684110 + | TonB-dependent heme receptor CJE1787 1684085 - 1685071 + | hemin ABC transporter, permease protein, putative CJE1788 1685071 - 1685847 + | hemin ABC transporter, ATP-binding protein, putative CJE1789 1685844 - 1686650 + | hemin ABC transporter, periplasmic hemin-binding protein, putative TERM 1735 1687573 - 1687584 + F 78 -3 -5.7827 | TGTAACATTTTTATC GATA TTTT TATC TTTTTTATTTCTCTT TERM 1736 1688174 - 1688186 + G 90 -4.9 -5.75538 | TTTGGCCGTTGCAAG CATTA GTA TAATG TTTTTATTTTTTAGC TERM 1737 1688593 - 1688607 + G 75 -4.3 -5.1925 | GTATTTTGGCATTGG TAGGA ATTTA TCCTA TTTTTTCACTTATAG kgtP 1687671 - 1688930 + | alpha-ketoglutarate permease mutY 1689935 - 1688916 - | A/G-specific adenine glycosylase TERM 1738 1688972 - 1688947 - G 72 -7.6 -3.55622 | opp_overlap 1688951, overlap 1688951 TTTAACGCTTTTAAA GAAAGTGCCG AAAGTG CGGTACTTTC TAACTCTTTTAAGGT TERM 1739 1689167 - 1689182 + g 95 -7.6 -5.5074 | AAAGCTTATCTTGGC TTTGCC CTAT GGCAAA TTTTTTATTAAATTC TERM 1740 1689971 - 1689950 - H 70 -7.5 -3.50929 | opp_overlap 1689967, overlap 1689947 TAAATGAGAGTATAA CAAAAAATT TTAA AATTTTTTG CTAAAATTAGCTCAA CJE1793 1690008 - 1690760 + | hypothetical protein TERM 1741 1690767 - 1690797 + F 81 -10 -3.18381 | opp_overlap 1690766 1690773, overlap 1690763 1690762 TGCAAATAACTTAAG GCAAAATAAACT CCTTTTA AGTTTATTTTGC TATACTTTTATCTTC TERM 1742 1690873 - 1690857 - f 75 -9.5 -2.62983 | overlap 1690860 CTCAGGGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA TERM 1743 1690961 - 1690941 - f 71 -8.3 -2.89742 | overlap 1690944 TGGAATTGGTAGACA CAAGGGACT TAA AATCCCTCG GAATTTTTCTTCCGT TERM 1744 1691510 - 1691522 + G 75 -9.1 -2.92522 | opp_overlap 1691509 1691508 TAACCTATCCAAATC CAGCC GTA GGCTG TGTAATCTTAGATAA TERM 1745 1691562 - 1691549 - g 76 -2.5 -5.56112 | ATAAAAATGAAAAAA TTTTA GCCA TAAAA GCTCATGAAAAAGCT TERM 1746 1691825 - 1691801 - g 74 -3 -5.41143 | TAGGTTTTAAAAAAA TTTTCATC AGCGTTAAA GATGAAAA TAAAATCGCAAGTGG TERM 1747 1691968 - 1691941 - g 100 -9.4 -4.7416 | gap 1, opp_overlap 1691941 TTAAAATGGCAAAAA GGGC-AATTTAAA CTT TTTAAATTAGCCC TTTCTATGAATGGCT TERM 1748 1691941 - 1691968 + G 88 -9.4 -4.06678 | gap 1, opp_overlap 1691941 TTAAAATGGCAAAAA GGGC-AATTTAAA CTT TTTAAATTAGCCC TTTCTATGAATGGCT CJE1794 1691440 - 1692420 + | riboflavin biosynthesis protein RibD, putative CJE1795 1692401 - 1692922 + | hypothetical protein TERM 1749 1692937 - 1692908 - T 95 -7.3 -5.37865 | opp_overlap 1692917, overlap 1692912 CTAAGAATGAAAAAA TACACCAAAGTGT AAAA ACACTTTAGCATA CTGTTTTTAAATTTG TERM 1750 1692933 - 1692912 - T 76 -8.1 -3.71857 | opp_overlap 1692917, overlap 1692908 GAATGAAAAAATACA CCAAAGTGT AAAA ACACTTTAG CATACTGTTTTTAAA sdaA 1694294 - 1692930 - | L-serine ammonia-lyase sdaC 1695559 - 1694309 - | serine transporter TERM 1751 1695293 - 1695282 - G 83 -3 -5.69023 | AAAATAGCAAAAAAA TACA AAAG TGTA ATTAAAAATCCACCG TERM 1752 1695755 - 1695776 + r 81 -7.4 -4.67011 | opp_overlap 1695755 ATCAAAAAATAAAAA TTTGGAAG ACTATG CTTCCAAA TTTTTGCATCAAATT TERM 1753 1695776 - 1695755 - R 100 -7.4 -5.77571 | opp_overlap 1695755 ATCAAAAAATAAAAA TTTGGAAG ACTATG CTTCCAAA TTTTTGCATCAAATT CJE1798 1696234 - 1695818 - | hypothetical protein CJE1799 1697043 - 1696300 - | hypothetical protein exbB-2 1697202 - 1697627 + | TonB system transport protein ExbB exbD 1697599 - 1698009 + | biopolymer transport exbD protein CJE1803 1699579 - 1698701 - | hypothetical protein TERM 1754 1698731 - 1698741 + g 72 -4 -5.08255 | overlap 1698733 TACAATTTGTGCTTC TTGA TTT TCAA TTTTATTTTGAAAAT TERM 1755 1698780 - 1698790 + g 70 -4 -4.90917 | overlap 1698784 AAATTCTGACTTAAT TCTT GCA AAGA TTTTTGCTTCAGTTT CJE1804 1699830 - 1699633 - | hypothetical protein CJE1805 1699952 - 1700935 + | hypothetical protein TERM 1756 1701016 - 1701001 - T 72 -9 -2.62018 | opp_overlap 1701001, overlap 1701000 AATATTGCAACTAAG GCCCAT GAAA ATGGGC TTTTTTTATTTTAAT TERM 1757 1701001 - 1701016 + T 100 -9 -6.11229 | opp_overlap 1701001 1701000 AATATTGCAACTAAG GCCCAT GAAA ATGGGC TTTTTTTATTTTAAT aroC 1702110 - 1701022 - | chorismate synthase rnc 1702784 - 1702110 - | ribonuclease III rnhA 1703211 - 1702771 - | ribonuclease H CJE1809 1704184 - 1703198 - | hypothetical protein TERM 1758 1703990 - 1703970 - G 72 -4.1 -5.09225 | ATTTCAGCCAAAAAA CTTAAATTT CCA AAACTCAAG CTACTATTTCTTAAC TERM 1759 1705392 - 1705382 - g 82 -5.4 -5.38054 | CTTGATAAACAAAAA GCTT TAG AAGC TATACAAAAATTCAC dnaG 1704254 - 1706071 + | DNA primase CJE1811 1706153 - 1706425 + | NifU family protein CJE1812 1706412 - 1706963 + | hypothetical protein TERM 1760 1708169 - 1708181 + G 72 -6.3 -4.30844 | opp_overlap 1708164 1708163 CTCAAGAAATTAAAG GGATA AAA TATCC TTTTAGTGATAAAGT murE 1706947 - 1708230 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase CJE1814 1708234 - 1708545 + | hypothetical protein TERM 1761 1709416 - 1709406 - g 72 -5.4 -4.68645 | GATCCAAAATCAAAA GCAT CAA ATGC AGGATTTATGGTAGG CJE1815 1708542 - 1709636 + | PDZ domain-containing protein TERM 1762 1709960 - 1709976 + G 71 -3 -5.32944 | ATCTTAGTGGGTGAT GCTTTA AATAC TGAAGC TTTTTTAGTTCTAAG ispA 1709633 - 1710478 + | geranyltranstransferase tkt 1710488 - 1712386 + | transketolase CJE1818 1712388 - 1713497 + | ABC transporter, permease protein, putative CJE1819 1713498 - 1714220 + | ABC transporter, ATP-binding protein TERM 1763 1714988 - 1714976 - g 74 -7.7 -3.86916 | opp_overlap 1714981 TATGATGATATTAAA GCATC TTT GATGC AAAATTTAGAGCTTT TERM 1764 1715048 - 1715068 + G 72 -8.3 -3.33744 | opp_overlap 1715048 1715053, overlap 1715047 CTAATAGAAAATTTA CAAAACAGC CCT GCTGATTTG ATTTTTAAAGAAACC TERM 1765 1715063 - 1715053 - g 78 -6.8 -4.5538 | opp_overlap 1715048 1715047, overlap 1715048 AGAAAATTTACAAAA CAGC CCT GCTG ATTTGATTTTTAAAG CJE1820 1714223 - 1715113 + | ABC transporter, periplasmic substrate-binding protein, putative TERM 1766 1715673 - 1715683 + G 72 -4 -5.10497 | CTTGAATAAAATTGG CAAT GAG ATTG TTTTTTGGGTAAATT CJE1821 1715113 - 1715712 + | putative lipoprotein TERM 1767 1715848 - 1715834 - g 71 -7.2 -3.81027 | overlap 1715844 GTGAATGAATTTAAA GCAAAT CAA ATTTGC TCTCAAATCAATGAT TERM 1768 1715882 - 1715894 + G 71 -7.7 -3.40082 | opp_overlap 1715882, overlap 1715887 AATGATTTTATAGGA GCACT TCA AGTGC TTGATATGTCTTTAA TERM 1769 1716184 - 1716168 - g 71 -2.3 -5.35815 | overlap 1716171 GAGATGAAATAAAAA TCATTCT ATC AGAATTA GCAACCGCAATTACC CJE1822 1715768 - 1716268 + | hypothetical protein TERM 1770 1716286 - 1716324 + T 100 -12 -4.10657 | opp_overlap 1716310 ATAGTAATCGTTTGT TCTCTTTAAGCAAATATA ATA TATTTTAGCTTAAAGAGA TTTTCCAAACTCTAA TERM 1771 1716409 - 1716392 - T 71 -8.5 -2.85354 | opp_overlap 1716392, overlap 1716391 1716394 TAGCCTAACCCAAAC GAGATCT TAAA AGATCTC TTTAAACTAAAATAA TERM 1772 1716392 - 1716409 + T 77 -8.5 -3.60627 | opp_overlap 1716392 1716391 1716394 TAGCCTAACCCAAAC GAGATCT TAAA AGATCTC TTTAAACTAAAATAA TERM 1773 1716466 - 1716426 - T 93 -8.7 -4.82998 | opp_overlap 1716426 1716426 1716460, overlap 1716428 TTAAACTAAAATAAA TATTTAGATAATTTAACAA TTT TTATTAAATTATCTAAACC ATATTTATGTTTTAG TERM 1774 1716464 - 1716428 - T 100 -13.5 -4.00914 | opp_overlap 1716426 1716426 1716460, overlap 1716426 AAACTAAAATAAATA TTTAGATAATTTAACAA TTT TTATTAAATTATCTAAA CCATATTTATGTTTT map 1717397 - 1716639 - | methionine aminopeptidase murI 1718150 - 1717407 - | glutamate racemase nlpC 1718610 - 1718152 - | lipoprotein NlpC nhaA-1 1719788 - 1718619 - | Na+/H+ antiporter NhaA nhaA-2 1720933 - 1719785 - | Na+/H+ antiporter NhaA TERM 1775 1721063 - 1721031 - R 83 -5 -5.49729 | gap 1, opp_overlap 1721053, overlap 1721053 AATTATTTAAAAAAA CAAGCCCAAGATACC AAAA AGT-TCTTAAGCTTG TTCTTAAGATATTTA CJE1828 1721258 - 1721076 - | hypothetical protein CJE1829 1721618 - 1721731 + | hypothetical protein TERM 1776 1722044 - 1722009 - f 79 -5.8 -5.05228 | opp_overlap 1722009, overlap 1722026 ATTAAATCACAAAAA TAAAATATATTTAAAT ATTT ATTAAAATACATTTTA TAATTTAATAAAAAA TERM 1777 1723165 - 1723151 - g 70 -4.2 -4.96388 | AATGATGAAACAAAA GGCAAA GAT TATGCC AAAGTTTCTAATGAT TERM 1778 1723863 - 1723877 + G 75 -4.2 -5.24531 | CTGTTTATAGAGAAG GTGCAG AAA CTGTGC TTTTTTATCAAGCCT CJE1830 1722176 - 1724266 + | FTR1 family iron permease CJE1831 1724263 - 1724802 + | hypothetical protein TERM 1779 1724800 - 1724834 + F 86 -5 -5.77734 | opp_overlap 1724800 1724803 1724833, overlap 1724803 1724808 1724833 ACAGGTACGCCAAAA TGATTTTACACTCGGA TTT TCCGAGTGTTTAAATA TTTTTATTTTTATTT TERM 1780 1724831 - 1724803 - f 74 -8.9 -3.09831 | opp_overlap 1724800 1724803 1724808, overlap 1724800 GGTACGCCAAAATGA TTTTACACTCGGA TTT TCCGAGTGTTTAA ATATTTTTATTTTTA TERM 1781 1724803 - 1724832 + F 78 -7.3 -4.45545 | gap 1, opp_overlap 1724803 1724800, overlap 1724800 1724808 GGTACGCCAAAATGA TTT-TACACTCGGA TTT TCCGAGTGTTTAAA TATTTTTATTTTTAT TERM 1782 1724808 - 1724826 + F 100 -13.2 -3.89368 | opp_overlap 1724803 1724800, overlap 1724803 1724800 GCCAAAATGATTTTA CACTCGGA TTT TCCGAGTG TTTAAATATTTTTAT CJE1832 1724885 - 1726288 + | hypothetical protein CJE1833 1726278 - 1727567 + | ABC transporter, permease protein CJE1834 1727557 - 1728675 + | ABC transporter, permease protein CJE1835 1728672 - 1729325 + | ABC transporter, ATP-binding protein CJE1836 1729322 - 1729810 + | thiredoxin,-like protein CJE1837 1729771 - 1730274 + | thioredoxin family protein CJE1838 1730721 - 1730284 - | hypothetical protein CJE1839 1730955 - 1730812 - | hypothetical protein CJE1840 1731326 - 1731021 - | hypothetical protein TERM 1783 1731108 - 1731118 + g 72 -6.8 -4.14739 | opp_overlap 1731103 1731108 GCAAGAAAGAGTAGA GAGC TTA GCTC TTTTACCATCACTAG TERM 1784 1731466 - 1731492 + r 71 -4.6 -4.85433 | opp_overlap 1731478, overlap 1731488 TTTTGTATATTTTAA TTATTTTTCAAA TCT TTTGCAAGATAA TTTTTAAATTTATCT TERM 1785 1731730 - 1731744 + r 72 -7.8 -3.322 | CGAACCTCTGACCTA CGGCTT AGA AGGCCG TTGCTCTATCCAGCT CJE1841 1732937 - 1732089 - | DNA ligase CJE1842 1733599 - 1732937 - | hypothetical protein TERM 1786 1733239 - 1733221 - G 70 -6 -4.27846 | opp_overlap 1733219 1733221 1733222, overlap 1733222 AAATAAAATCATAAA TCTTTGCA ACC TGCAAAGG TATTTCAACATTGGC TERM 1787 1733221 - 1733239 + g 73 -8.2 -3.38314 | opp_overlap 1733221 1733222, overlap 1733219 1733222 AAATAAAATCATAAA TCTTTGCA ACC TGCAAAGG TATTTCAACATTGGC TERM 1788 1733222 - 1733238 + g 73 -9.5 -2.62667 | opp_overlap 1733222 1733221, overlap 1733221 1733219 AATAAAATCATAAAT CTTTGCA ACC TGCAAAG GTATTTCAACATTGG TERM 1789 1733238 - 1733222 - G 76 -9.5 -3.14267 | opp_overlap 1733221 1733219 1733222, overlap 1733221 AATAAAATCATAAAT CTTTGCA ACC TGCAAAG GTATTTCAACATTGG CJE1843 1733792 - 1733589 - | hypothetical protein eno 1735102 - 1733858 - | phosphopyruvate hydratase recA 1736133 - 1735102 - | recombinase A TERM 1790 1736066 - 1736078 + g 76 -6.3 -4.55721 | AGTCTTAAGATAGTG CCTTT TCC AAAGG TTTTATCTAAACTTT CJE1846 1736239 - 1737099 + | hypothetical protein fliQ 1737111 - 1737380 + | flagellar biosynthesis protein FliQ murB 1737377 - 1738153 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1791 1738171 - 1738197 + T 86 -3.2 -6.01187 | ATTTTTCAATATATC TTTAAATTAATT GAT AGTTAATTTTAA TTTTTTTATTTCATT CJE1849 1738941 - 1738177 - | hypothetical protein cysQ 1739751 - 1738987 - | CysQ TERM 1792 1739795 - 1739824 + r 70 -5.1 -4.6008 | opp_overlap 1739796, overlap 1739776 1739796 AAATTATACAAGAAG ATTTTGTGGAATT TTTA ATTTCCACAAAAA TTTTAATTATATTTT TERM 1793 1739796 - 1739823 + r 75 -8.6 -3.33608 | opp_overlap 1739796, overlap 1739776 1739795 AATTATACAAGAAGA TTTTGTGGAATT TTTA ATTTCCACAAAA ATTTTAATTATATTT TERM 1794 1739823 - 1739796 - R 77 -8.6 -3.54548 | opp_overlap 1739776 1739795 1739796 AATTATACAAGAAGA TTTTGTGGAATT TTTA ATTTCCACAAAA ATTTTAATTATATTT gltA 1741099 - 1739831 - | citrate synthase TERM 1795 1740146 - 1740164 + g 71 -4.6 -4.83615 | AAGTTTTTTAAGTAC TTTTGCTC TAG GATCAAAA TTTTTATAAACCCTA CJE1852 1742389 - 1741214 - | sodium/hydrogen exchanger family protein TERM 1796 1742277 - 1742263 - G 75 -7.2 -4.17048 | TTGCCCCTAAAATAA TTTCAG TAG CTGAAA GAGGCAAGCGTAAAA bioB 1743206 - 1742370 - | biotin synthase topA 1745310 - 1743208 - | DNA topoisomerase I TERM 1797 1745444 - 1745430 - H 72 -4.4 -4.92812 | TCATAACAAAATAAA TAAAAT ATA ATTTTA AGTAATTTTAAATAC TERM 1798 1746241 - 1746253 + G 81 -2.7 -5.67967 | overlap 1746242 GGCAATTTTTCCCTA TCTAT TTT ATAGG TTTTTTTATCATGGT CJE1855 1745505 - 1746776 + | major facilitator superfamily protein TERM 1799 1746794 - 1746773 - T 91 -10.3 -4.38114 | opp_overlap 1746773 AAAACCTAGAATAAA TTAGCAAGA AAAA TCTTGCTAA TTTTATTTATTACAA TERM 1800 1746773 - 1746794 + T 100 -10.3 -5.09762 | opp_overlap 1746773 AAAACCTAGAATAAA TTAGCAAGA AAAA TCTTGCTAA TTTTATTTATTACAA secY 1748069 - 1746804 - | preprotein translocase subunit SecY TERM 1801 1746849 - 1746859 + g 70 -4 -4.93898 | opp_overlap 1746849 TTTACTCATATAAAT TTGA GCT TCAA TTTTTCTCATCGTAT TERM 1802 1747423 - 1747403 - G 81 -8.4 -4.0492 | overlap 1747406 CAAGTTCTATATAAA TAATCACC CCTAT GGTGATTA AAATCAAAGCAAAAA rplO 1748461 - 1748069 - | 50S ribosomal protein L15 rpsE 1748909 - 1748466 - | 30S ribosomal protein S5 rplR 1749277 - 1748921 - | 50S ribosomal protein L18 rplF 1749823 - 1749287 - | 50S ribosomal protein L6 rpsH 1750297 - 1749902 - | 30S ribosomal protein S8 rpsN 1750492 - 1750307 - | 30S ribosomal protein S14 rplE 1751039 - 1750494 - | 50S ribosomal protein L5 TERM 1803 1750873 - 1750895 + g 70 -4.3 -4.93696 | gap 1, opp_overlap 1750873, overlap 1750878 GCAATTAAAGAAATA GTATCTGCAA CATT TTGCA-ATAC TTTTTGATCTTTAGC rplX 1751276 - 1751043 - | 50S ribosomal protein L24 TERM 1804 1751166 - 1751176 + g 72 -5.4 -4.70659 | ACATCCTTCAACTAC CACT TTA AGTG TTTTTGGATATACCG rplN 1751644 - 1751276 - | 50S ribosomal protein L14 rpsQ 1751895 - 1751644 - | 30S ribosomal protein S17 rpmC 1752090 - 1751905 - | 50S ribosomal protein L29 TERM 1805 1752013 - 1752033 + g 70 -5.5 -4.24123 | opp_overlap 1752012 CTTTTGTTTTAAAGT GAATAAAAG CAC CTTTTTTTC TTTTAGCATTGTTGC rplP 1752502 - 1752077 - | 50S ribosomal protein L16 rpsC 1753206 - 1752505 - | 30S ribosomal protein S3 rplV 1753631 - 1753206 - | 50S ribosomal protein L22 TERM 1806 1753271 - 1753291 + g 81 -2.6 -5.80817 | overlap 1753273 CTGGAGCTTTTGTTG TAGTAGTT TTTTT AGCTACTG TTTTTTTCTCTTCAG rpsS 1753923 - 1753642 - | 30S ribosomal protein S19 rplB 1754755 - 1753925 - | 50S ribosomal protein L2 TERM 1807 1754046 - 1754066 + g 76 -9.7 -2.83677 | GAATTTTTCTTACCT TCACCCCCA CCG TGCGGGTGA TCTACTGGGTTCATT rplW 1755038 - 1754757 - | 50S ribosomal protein L23 rplD 1755655 - 1755041 - | 50S ribosomal protein L4 rplC 1756227 - 1755652 - | 50S ribosomal protein L3 rpsJ 1756548 - 1756237 - | 30S ribosomal protein S10 TERM 1808 1756658 - 1756694 + G 100 -9.7 -4.70879 | opp_overlap 1756656 1756684 AATTTGATGAAATTT TTCTATTATTTTCCTTT TAA AAAGGATAAAAATAGAA TTTTTAGAATTTAAA CJE1877 1756607 - 1756708 + | hypothetical protein CJE1878 1757507 - 1756746 - | RNA pseudouridylate synthase family protein TERM 1809 1757538 - 1757525 - R 70 -5.2 -4.57073 | opp_overlap 1757515 1757513 1757525 GATCTTCCTTAAAAA GGGC GTTTTT GCCC TTTTTTACATTACAA TERM 1810 1757525 - 1757538 + r 84 -5.9 -5.15969 | opp_overlap 1757525, overlap 1757515 1757513 GATCTTCCTTAAAAA GGGCG TTTT TGCCC TTTTTTACATTACAA CJE1879 1759531 - 1757543 - | metallo-beta-lactamase family protein TERM 1811 1759311 - 1759334 + gr 100 -5.4 -5.97575 | TTACCTGTGAGTTTT GAAGGAAGAT TGCG ATTTTTCTTC TTTTTTTTCTCAGTT TERM 1812 1759355 - 1759370 + gr 76 -6.2 -4.56133 | TTTCTCAGTTTTATT TTCTGA GTTT TCAGAA TTTTCCTTGTTGGAA ksgA 1760306 - 1759506 - | dimethyladenosine transferase TERM 1813 1759698 - 1759720 + gH 82 -9.4 -3.55801 | opp_overlap 1759657, overlap 1759657 TTTAAAACAATCTTT TAGAAAATTT TTG AAATTTTCTA TTTCGCAAAGTTCAT TERM 1814 1760313 - 1760358 + H 93 -6.5 -5.28826 | opp_overlap 1760313 TTTAACCATAAGAAA TAATTTTATCTAAAAATTCTT AATT AAGTCTTTTTAGGTAGAATTA TTTTTTGTAAAATTT TERM 1815 1760668 - 1760653 - g 86 -6.2 -5.35224 | overlap 1760648 CTTAGAAAAAGAAAA TGTTTC TCGT GAAACA ATAAAAATCAATTCT CJE1881 1760387 - 1760923 + | hypothetical protein CJE1882 1760947 - 1762017 + | radical SAM protein CJE1883 1762014 - 1762112 + | hypothetical protein TERM 1816 1762495 - 1762515 + F 77 -4.9 -5.10665 | opp_overlap 1762495 1762510, overlap 1762490 TTATAAATTCTTAAA TTTTTGATA AAA TATTAAAAA TTTTATTTATTAGGT TERM 1817 1762752 - 1762738 - g 72 -2.8 -5.40004 | opp_overlap 1762740, overlap 1762740 CAGCAAAGGAAAAAA TAGGAA AAT TTCCTT TTAAAAGTACCTCTT TERM 1818 1763118 - 1763102 - g 87 -3.8 -5.86332 | CCAATGGAAAAAAAA CTTTTT AAACA AAAAAG AACAAATGAAATATA TERM 1819 1763414 - 1763429 + G 72 -6.2 -4.28653 | opp_overlap 1763413 1763414 ATTCCATATAGGAAT TTTGGT TTTG ACCAAA TATTTTTATTATTCT CJE1884 1762560 - 1763495 + | lipopolysaccharide core biosynthesis protien, putative TERM 1820 1763677 - 1763661 - f 82 -10.9 -2.62616 | overlap 1763664 TCAGCTGGGAGAGCA CAACGCT GGC AGCGTTG GGGTCAGCGGTTCGA TERM 1821 1764174 - 1764199 + G 71 -7.7 -3.53444 | gap 1, opp_overlap 1764174, overlap 1764175 AATTTTTGCGAAAAT TTTGCCTTG-GA AAA TCACAAGGCAAG TTTAAGAGCAGATAC TERM 1822 1764175 - 1764198 + G 70 -9 -2.71924 | gap 1, opp_overlap 1764174, overlap 1764174 ATTTTTGCGAAAATT TTGCCTTG-GA AAA TCACAAGGCAA GTTTAAGAGCAGATA CJE1885 1763817 - 1764347 + | acetyltransferase leuD 1764929 - 1764327 - | isopropylmalate isomerase small subunit leuC 1766337 - 1764931 - | isopropylmalate isomerase large subunit leuB 1767406 - 1766330 - | 3-isopropylmalate dehydrogenase leuA 1768938 - 1767403 - | 2-isopropylmalate synthase CJE1890 1769258 - 1769887 + | hypothetical protein TERM 1823 1769917 - 1769897 - T 73 -8.4 -3.16564 | opp_overlap 1769887 1769897 GGTTGATTTCATTAA TGCAAGTT ATAAA AACTTGCA TTAGATTAAAATTTA TERM 1824 1769897 - 1769917 + T 73 -8.4 -3.1996 | opp_overlap 1769897, overlap 1769887 GGTTGATTTCATTAA TGCAAGTT ATAAA AACTTGCA TTAGATTAAAATTTA CJE1891 1770567 - 1769923 - | hypothetical protein TERM 1825 1770593 - 1770611 + r 100 -9 -5.1764 | opp_overlap 1770592 CTTATAATAAAATTC GATCTAAA AAA TTTAGATC TTTTTATATTATATA CJE1892 1771088 - 1770705 - | 7-cyano-7-deazaguanine reductase TERM 1826 1771054 - 1771066 + g 72 -4.9 -4.86385 | TCCATATTTTCTACA TCAAA TTC TTTGA TTTCTTTTTCACCAT CJE1893 1771248 - 1771847 + | hypothetical protein TERM 1827 1771879 - 1771849 - T 72 -7.7 -3.68261 | opp_overlap 1771857 1771874, overlap 1771852 1771857 CTACAAGAGTTTAAA TCATCAAAGCACA AAAGG TGTGCTTTGATAC ACATCATAATTGAGC TERM 1828 1771876 - 1771852 - T 90 -11.6 -2.94299 | opp_overlap 1771857 1771874, overlap 1771849 1771857 CAAGAGTTTAAATCA TCAAAGCACA AAAGG TGTGCTTTGA TACACATCATAATTG metA 1772733 - 1771852 - | homoserine O-succinyltransferase metX 1774088 - 1772817 - | homoserine O-acetyltransferase TERM 1829 1774215 - 1774201 - R 87 -11.4 -3.3071 | ATACGAGCAGATTAA GCGTGC CAA GCACGC ATACAGAAAGAAGAA TERM 1830 1774327 - 1774311 - R 85 -5.3 -5.42198 | overlap 1774306 1774318 CTTTAAAAAATAAAA TTAAAAT TAA ATTTTAA AAAATTTATATCACA TERM 1831 1774396 - 1774353 - R 93 -10.6 -4.10657 | gap 1, opp_overlap 1774358, overlap 1774354 TCACATTGCTTAAAA TTTTATTGC-AACTCACCCCT AGC AAGAGTGAGTTAGCAATAAAT TGAAGGCAGTTCAAG TERM 1832 1774395 - 1774354 - R 100 -14.1 -3.06073 | gap 1, opp_overlap 1774358, overlap 1774353 CACATTGCTTAAAAT TTTATTGC-AACTCACCCCT AGC AAGAGTGAGTTAGCAATAAA TTGAAGGCAGTTCAA flgE 1777050 - 1774513 - | flagellar hook protein FlgE ruvC 1777736 - 1777254 - | Holliday junction resolvase