TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.700045 %AT, 1428750 nt, 8376 terms. Intergenic: 0.740926 %AT, H2T: 142324 nt, 930 terms; T2T: 27819 nt, 567 terms; H2H: 33445 nt, 580 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|222823046|ref|NC_012039.1| Campylobacter lari RM2100, complete genome (length 1525460) TERM 1 267 - 245 - g 72 -2.8 -5.4148 | overlap 247 249 CAAATAATCAAAAAA TAGAGAAAAA ACA TTTTTCTACA GATATTTCACAAATT TERM 2 839 - 815 - g 70 -4.3 -4.98522 | opp_overlap 815 AACTTGATACAAAAA TCGCAATTATT AAG AAAAAATGCGA ATTTAATGCTATTTA dnaA 1 - 1329 + | chromosomal replication initiator protein DnaA TERM 3 1769 - 1743 - g 73 -6 -4.65584 | overlap 1744 AGAAACTATAGAAAA TTTCCTTTTTAT TAG ACAAAAAGGAAC CAAATATAAACTTCC TERM 4 1768 - 1744 - g 78 -9.5 -3.37724 | overlap 1743 GAAACTATAGAAAAT TTCCTTTTTAT TAG ACAAAAAGGAA CCAAATATAAACTTC TERM 5 2088 - 2072 - g 79 -5.3 -5.24449 | overlap 2063 TAGAAATGCAAAAAA TATTTTT TGA AAAAATA GAAATTTATTATGAT dnaN 1462 - 2529 + | DNA polymerase III, beta subunit gyrB 2539 - 4857 + | DNA gyrase, subunit B TERM 6 4933 - 4920 - g 70 -8.1 -3.16475 | opp_overlap 4913 4911 CACTTACACATTGAA GGCTC ATTA GAGCC TAAAATGATGTTTGA TERM 7 5496 - 5481 - g 74 -7.6 -3.8647 | AGTGAGTATATCAAA CAAGCT TTAG AGCTTG GTGTAAATAGAATTG Cla_0004 4866 - 5858 + | putative adenosine deaminase TERM 8 6650 - 6635 - g 71 -3.4 -5.30616 | CCAGCGAAAGAAAAA TTAAAT TTAG ATTTAA AAACTTTGGATTTGT Cla_0005 5855 - 6856 + | conserved hypothetical protein (DUF511 domain protein) Cla_0006 6832 - 7215 + | conserved hypothetical protein, putative GTP cyclohydrolase I TERM 9 7213 - 7243 + F 72 -9.3 -2.65409 | opp_overlap 7213 7233 7241, overlap 7212 7210 TTAGTAGTCCCACAA TGATTTTAAGATT GAATA AGTCTTAAAATCA ATATTATATTAACTT TERM 10 7674 - 7662 - g 79 -7.7 -4.20367 | CTTTGTAAGAAATAA TGGTG TTC CACCA GAAATGAGTAAAATA Cla_0007 7387 - 8637 + | molybdopterin oxidoreductase family protein TERM 11 8715 - 8725 + G 72 -6.8 -4.11412 | opp_overlap 8714 8715 CAACCTAAAGTAAAT CCTG ATA CAGG TTTGATTATTGATTC Cla_0008 8640 - 8975 + | hypothetical protein Cla_0009 9018 - 9662 + | possible outer membrane protein Cla_0010 9672 - 9881 + | conserved hypothetical protein, PhnA family TERM 12 9888 - 9907 + T 82 -6.5 -4.92757 | opp_overlap 9888, overlap 9883 AAAATATAGTAAAAA TTCCCAA TTATTC TTGGGAA TTTTCTTCTTGATAA TERM 13 9907 - 9888 - T 82 -6.5 -4.91573 | opp_overlap 9888 9883 AAAATATAGTAAAAA TTCCCAA TTATTC TTGGGAA TTTTCTTCTTGATAA thyX 10527 - 9895 - | thymidylate synthase TERM 14 11956 - 11930 - g 76 -8 -3.93819 | overlap 11936 AGCAAATTAGAACAA GCAAAACTCCAC TTG GTGGAACTATGC GTCTTGGAGCTTATG TERM 15 11950 - 11936 - g 76 -6.4 -4.59414 | overlap 11930 TTAGAACAAGCAAAA CTCCAC TTG GTGGAA CTATGCGTCTTGGAG pyrG 10627 - 12264 + | CTP synthetase TERM 16 13684 - 13702 + G 74 -3.2 -5.46698 | opp_overlap 13684 TTTAACTCAAGGAAA TAAAACTT TAG AAGCTTTA TTTTTTAATTTTGAC recJ 12254 - 13825 + | single-stranded-DNA specific exonuclease Cla_0014 13894 - 14472 + | conserved hypothetical protein, SLT family TERM 17 14502 - 14469 - T 85 -9.9 -3.81414 | opp_overlap 14475, overlap 14475 ATTGGCAAGTAATAA TTAAAACAAGAAATT ATAA ATTTTCTTGTTTTAA AGCTTCTGCTTGGTA prfA 15549 - 14482 - | peptide chain release factor 1 rpsT 15816 - 15553 - | 30S ribosomal protein S20 TERM 18 15589 - 15609 + g 76 -5.3 -5.02074 | overlap 15593 TAATGCTAATCTACT CACACGGCG TGA CGCAGTTTG TTTTTTCAAAAATCC TERM 19 15593 - 15605 + g 75 -4.7 -5.04249 | overlap 15589 GCTAATCTACTCACA CGGCG TGA CGCAG TTTGTTTTTTCAAAA TERM 20 15803 - 15818 + g 78 -6.2 -4.74219 | opp_overlap 15802 CTTTTTTCAGCAGAT TTATGG TTTG CCATAA TTTTCCTTTATTTAT Cla_0017 16866 - 16105 - | putative ribosomal pseudouridine synthase TERM 21 16759 - 16769 + g 86 -3.2 -5.9003 | ATTTACACTATCATT TAGC AAG GCTG TTTTTTTATTGATTT Cla_0018 18834 - 16876 - | metallo-beta-lactamase family protein TERM 22 18603 - 18621 + gr 77 -8.2 -3.81414 | TGGCTTCTATACTTT TGGCAAGT TCT ATTTGCCA TTCTTCATTACCGCT TERM 23 18747 - 18759 + gr 88 -2.7 -6.17669 | CACTATTTTGCTCTT GATTT TGT GAATC TTTTTTTCTTTTGTT ksgA 19621 - 18800 - | dimethyladenosine transferase TERM 24 19444 - 19473 + gH 88 -9.4 -4.12599 | opp_overlap 19444 19452, overlap 19462 TCAAATCTTTATCAA TCTCATAAGCTC TAATAT GAGCTTGTGGGA TTTTCAAAAGTTCTT Cla_0020 19712 - 20245 + | conserved hypothetical protein, putative purine nucleoside phosphorylase TERM 25 20462 - 20424 - g 78 -4.1 -5.42259 | gap 1 GTACTTGCAAAAAAA TTTTCATTTTTCAC-CTT TAAA ATGTGTGAAAGATGAAAA AAGCAAAGATGGAAG Cla_0021 20254 - 21324 + | conserved hypothetical protein, radical SAM enzyme (Cfr family) Cla_0022 21421 - 22431 + | hypothetical protein Cla_0023 23330 - 22428 - | putative ribosomal pseudouridine synthase TERM 26 22464 - 22484 + g 75 -4.1 -5.2197 | overlap 22478 TTCACCTTTTACATC TTTTTGAGA TTG TATCAAAAA TTTTTGATTTTTATA TERM 27 22478 - 22491 + g 70 -3.9 -5.04597 | overlap 22464 CTTTTTGAGATTGTA TCAAA AATT TTTGA TTTTTATATATAAAT TERM 28 23844 - 23828 - g 74 -8 -3.73534 | TAATGGTAGGAAGAA GCCATG GAATT CATGGC GAGCCTATAACTTTT purB1 23410 - 24738 + | adenylosuccinate lyase TERM 29 25793 - 25809 + G 70 -6.5 -4.19123 | TGGACGCTTTTTGAT CCTGCTG ATA CAGCAAG TTTATGTGATTTATA nrdA 24752 - 27127 + | ribonucleoside-diphosphate reductase, alpha subunit TERM 30 27357 - 27386 + G 77 -4.9 -5.18726 | overlap 27360 TGGTTCAAACTCAAG TTTCAGCCGCAGG TACG CTTTCGGCTGTGA TTTTTGTTATACCAG TERM 31 27360 - 27383 + G 76 -8.8 -3.42342 | overlap 27357 TTCAAACTCAAGTTT CAGCCGCAGG TACG CTTTCGGCTG TGATTTTTGTTATAC TERM 32 27637 - 27625 - g 71 -7.7 -3.38836 | opp_overlap 27624 27623 27625, overlap 27624 AGGCTTAAAAGAAAT CACAC TTG GTGTG GCTTTTGCTTCTATA TERM 33 27680 - 27699 + G 77 -7.2 -4.33808 | opp_overlap 27680 TCAAGCGGTTTTAAA CTACTTTC AAGT GGAAGTAG TTTTGCATTCATTTG Cla_0026 27143 - 29128 + | conserved hypothetical integral membrane protein, putative oligopeptide transporter, OPT family Cla_0027 29125 - 29931 + | undecaprenol kinase, putative thrS 30038 - 31849 + | threonyl-tRNA synthetase TERM 34 32237 - 32251 + G 76 -10 -2.70979 | opp_overlap 32232, overlap 32233 GCCGTGAAATGGGTT CTCCTG AGG CAGGAG TAGCTTTGCTTGAAA infC 31846 - 32367 + | translation initiation factor IF-3 TERM 35 32394 - 32365 - f 85 -4.3 -5.93252 | opp_overlap 32369 32371, overlap 32368 32369 32371 CCTAAAAAGAAAAAA TAATCACAAGCCT TTTA AGGCTTGTATTTT AAACTTATGCTAGAA TERM 36 32391 - 32368 - f 79 -6 -4.97159 | opp_overlap 32369 32371, overlap 32365 32369 32371 AAAAAGAAAAAATAA TCACAAGCCT TTTA AGGCTTGTAT TTTAAACTTATGCTA TERM 37 32390 - 32369 - f 82 -9.5 -3.52805 | opp_overlap 32369 32371, overlap 32368 32365 32371 AAAAGAAAAAATAAT CACAAGCCT TTTA AGGCTTGTA TTTTAAACTTATGCT TERM 38 32369 - 32390 + F 77 -7.3 -4.22338 | opp_overlap 32369 32368 32365 32371, overlap 32371 AAAAGAAAAAATAAT CACAAGCCT TTTA AGGCTTGTA TTTTAAACTTATGCT TERM 39 32388 - 32371 - f 81 -9.9 -3.2756 | opp_overlap 32369 32371, overlap 32369 32368 32365 AAGAAAAAATAATCA CAAGCCT TTTA AGGCTTG TATTTTAAACTTATG TERM 40 32371 - 32388 + F 85 -9.9 -3.70689 | opp_overlap 32371 32369 32368 32365, overlap 32369 AAGAAAAAATAATCA CAAGCCT TTTA AGGCTTG TATTTTAAACTTATG TERM 41 32464 - 32489 + G 70 -5.5 -4.27316 | opp_overlap 32465, overlap 32465 CTTGGAAACAAAAGA TCCTTGCTTGA TTTT TTAAGTAAGGG TTTTAAATTCGCACA TERM 42 33367 - 33357 - g 82 -4 -5.55855 | TGTAAAAAAAGAAAA GTTT TTA AAAC GCTTGCAAAAATTTG Cla_0030 32401 - 33492 + | D12-class N6-adenine-specific DNA methyltransferase Cla_0031 34355 - 33489 - | conserved hypothetical protein, putative transcriptional regulator TERM 43 33766 - 33798 + g 81 -2.9 -5.69976 | overlap 33767 CTTTGATTTTTTTGA ATTTGCTTTAAAA AGTCTTC TTTTAAAGCGAAA TTTTCTTTTTTTTCT TERM 44 34356 - 34378 + r 70 -6.4 -4.17762 | overlap 34357 34374 CTTGTCTTTATCCAT GCAAAAAC CTTTTTT GTTTTTGC TTATTTTAGCAAATC TERM 45 34357 - 34371 + r 79 -5.8 -5.07971 | overlap 34356 TTGTCTTTATCCATG CAAAAA CCT TTTTTG TTTTTGCTTATTTTA Cla_0032 35858 - 34434 - | conserved hypothetical protein, putative VWA domain protein TERM 46 35301 - 35313 + g 80 -6.3 -4.91109 | opp_overlap 35308 35311, overlap 35294 35311 GCATCCTGTATTATT TCCAT AAT ATGGA TTTTTATCGTGAAAA TERM 47 35760 - 35744 - G 75 -5.9 -4.82901 | opp_overlap 35744 35737 35747 TCTCTTCTATAAAAA GACGAAA TCC TTTCATC TTTTTAATATATACA Cla_0033 37572 - 35890 - | conserved hypothetical protein, putative MoxR/RavA-like ATPase TERM 48 36194 - 36206 + g 71 -4.9 -4.8143 | opp_overlap 36194 CATTCTTCTATACCA GAAAA ATC TTTTC TTTTTGAATTATTAA TERM 49 37743 - 37727 - H 70 -3.7 -5.14563 | overlap 37729 TCTTTTATGAAAAAA TTTATCC AAA GGATACA CATGCCAAAAATGAA rpmI 37745 - 37936 + | 50S ribosomal protein L35 rplT 38034 - 38387 + | 50S ribosomal protein L20 TERM 50 38393 - 38419 + GT 87 -3.7 -5.92399 | opp_overlap 38399, overlap 38396 AGCACTTTAATCTTA CCACAAGGCTT TTTGC AAGCCTTGTTC TTTTTTGTTTTCTTC TERM 51 38396 - 38416 + GT 100 -9.8 -4.94109 | opp_overlap 38399, overlap 38393 ACTTTAATCTTACCA CAAGGCTT TTTGC AAGCCTTG TTCTTTTTTGTTTTC Cla_0036 38335 - 39273 + | ATP-dependent DNA ligase Cla_0037 40092 - 39283 - | cation ABC transporter, permease protein TERM 52 39898 - 39885 - G 74 -2.4 -5.58209 | overlap 39896 GCAAAGCTAAAAAAA GAGT AAACAA ACTC GTGCTAACAAGTACT Cla_0038 40834 - 40085 - | cation ABC transporter, ATP-binding protein TERM 53 40517 - 40540 + g 77 -4.7 -5.24531 | GGCTTGCTCTTGATC TTTTTTGGT ATAAAA ACCAAAGAA TTTTTTATCCACCCT Cla_0039 41667 - 40831 - | cation ABC transporter, periplasmic cation-binding protein TERM 54 42317 - 42306 - g 73 -5.8 -4.53705 | opp_overlap 42306 AAGTGCGATAGAAAA TGCC TTGT GGCA TTTGAGTATGAATGG Cla_0040 41728 - 42426 + | hypothetical protein TERM 55 42421 - 42458 + T 76 -6.5 -4.57569 | opp_overlap 42428, overlap 42423 42428 AAACTTTTGATTATC GATTAAATTTCAAGGTT AAAT AACCTTGAAATTTAGAG TTTTTCCGGCCATAA TERM 56 42423 - 42456 + T 100 -13.5 -2.60211 | opp_overlap 42428, overlap 42421 42428 ACTTTTGATTATCGA TTAAATTTCAAGGTT AAAT AACCTTGAAATTTAG AGTTTTTCCGGCCAT TERM 57 42428 - 42451 + T 91 -11.2 -3.8046 | opp_overlap 42428, overlap 42423 42421 TGATTATCGATTAAA TTTCAAGGTT AAAT AACCTTGAAA TTTAGAGTTTTTCCG TERM 58 42451 - 42428 - T 91 -11.2 -3.77196 | opp_overlap 42423 42421 42428 TGATTATCGATTAAA TTTCAAGGTT AAAT AACCTTGAAA TTTAGAGTTTTTCCG pyrC1 43428 - 42436 - | dihydroorotase Cla_0042 43667 - 43437 - | hypothetical protein dgkA 44023 - 43652 - | diacylglycerol kinase Cla_0044 45555 - 44023 - | conserved hypothetical protein, putative sulfatase TERM 59 45153 - 45143 - G 70 -4 -5.00616 | opp_overlap 45148 CTTTTTTTGAAAAAA TATC CTT GATA ATCAATCTTAATAAA xth 45654 - 46412 + | exodeoxyribonuclease III Cla_0047 46766 - 47380 + | conserved hypothetical protein (DUF285 domain protein) TERM 60 47406 - 47386 - f 85 -8.4 -4.20834 | opp_overlap 47386, overlap 47381 GCTAAAATAATCAAA TTCACACA TTTTT TGTGTGAA TTTTTCTTTTATTTC TERM 61 47386 - 47406 + F 100 -8.4 -5.67711 | opp_overlap 47386 47381 GCTAAAATAATCAAA TTCACACA TTTTT TGTGTGAA TTTTTCTTTTATTTC TERM 62 47591 - 47573 - gf 70 -6.2 -4.13014 | TTGATATTTTCAAAA TTAAAAAT GCC ATTTTTAA AGCTAATATAAACTC TERM 63 48617 - 48631 + GF 70 -5.6 -4.2349 | opp_overlap 48618, overlap 48618 TGAGAGGCTTAGGAA ATGGCG AAA CGCCAA TTTTCCCTGTGCAAA TERM 64 48630 - 48618 - gf 84 -9.1 -3.74251 | opp_overlap 48617 48618 GAGAGGCTTAGGAAA TGGCG AAA CGCCA ATTTTCCCTGTGCAA TERM 65 48618 - 48630 + GF 76 -9.1 -3.13773 | opp_overlap 48618, overlap 48617 GAGAGGCTTAGGAAA TGGCG AAA CGCCA ATTTTCCCTGTGCAA nrdD 47512 - 49791 + | anaerobic ribonucleoside triphosphate reductase TERM 66 49815 - 49833 + GF 86 -9.6 -3.83724 | opp_overlap 49814 49811 49815 GTGTTATAAAAGAAT CCATAGTC GAT GGCTATGG TTTGCGTTATGTGAT nrdG 49739 - 50272 + | anaerobic ribonucleoside triphosphate reductase activating protein TERM 67 50274 - 50286 + F 72 -3.4 -5.38497 | opp_overlap 50274 TTTTTGAAAAATAAA GACT CATTT AGTC TTTTTTAATTTAACT sodB 50340 - 50993 + | superoxide dismutase (Fe) Cla_0051 51053 - 52426 + | putative C4-dicarboxylate transporter TERM 68 52458 - 52428 - T 88 -9.9 -3.86897 | GGTATTTTGCATAAA TTTAGAGTGATGG TTTAG CTATCACTCTAAA ACAACCCCTTCATTT purM 53438 - 52449 - | phosphoribosylaminoimidazole synthetase coaE 53497 - 54078 + | dephospho-CoA kinase TERM 69 54091 - 54069 - f 72 -7.2 -3.65832 | overlap 54067 AAATTTTTTAAAACA CACTTTTTAA AGG TTAAAAAATG AAATTTTATAAGTAC dapF 54089 - 54838 + | diaminopimelate epimerase Cla_0055 54813 - 55520 + | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein Cla_0056 56578 - 55517 - | conserved hypothetical ATP-binding protein TERM 70 56631 - 56647 + H 82 -10.9 -2.62616 | overlap 56634 TCGAACCGCTGACCC CAACGCT GCC AGCGTTG TGCTCTCCCAGCTGA TERM 71 56785 - 56749 - H 89 -9.7 -4.54477 | opp_overlap 56757 GTAAAATTTATAAAA TTTAATTTTTATCCTTC TTA GAAGGAAAATAATTAAA AAAAATGTATAAATT rpsJ 56900 - 57211 + | 30S ribosomal protein S10 rplC 57221 - 57796 + | 50S ribosomal protein L3 rplD 57793 - 58407 + | 50S ribosomal protein L4 rplW 58409 - 58690 + | 50S ribosomal protein L23 rplB 58692 - 59522 + | 50S ribosomal protein L2 rpsS 59524 - 59805 + | 30S ribosomal protein S19 rplV 59817 - 60191 + | 50S ribosomal protein L22 TERM 72 60859 - 60842 - g 75 -4.8 -5.09426 | TTCAACCTGAAAAAA CCGAAG AAAGCG CTCCGG CTAAAAAACCAAGAA rpsC 60193 - 60894 + | 30S ribosomal protein S3 rplP 60897 - 61322 + | 50S ribosomal protein L16 rpmC 61309 - 61494 + | 50S ribosomal protein L29 rpsQ 61504 - 61755 + | 30S ribosomal protein S17 rplN 61755 - 62123 + | 50S ribosomal protein L14 rplX 62123 - 62350 + | 50S ribosomal protein L24 rplE 62352 - 62897 + | 50S ribosomal protein L5 rpsN 62899 - 63084 + | 30S ribosomal protein S14 rpsH 63097 - 63492 + | 30S ribosomal protein S8 rplF 63569 - 64105 + | 50S ribosomal protein L6 rplR 64116 - 64472 + | 50S ribosomal protein L18 rpsE 64456 - 64932 + | 30S ribosomal protein S5 rplO 64936 - 65328 + | 50S ribosomal protein L15 secY 65328 - 66590 + | preprotein translocase, SecY subunit TERM 73 66586 - 66616 + F 73 -7 -4.19276 | opp_overlap 66591 66595, overlap 66591 66595 TAAGCGCAGTAGGTT TATAAGAAAGTAGA TTT TCTACTTTCTTCTC TTTTAAGGATTTTGA TERM 74 66611 - 66591 - f 87 -11.3 -3.31792 | opp_overlap 66586 66591 66595, overlap 66595 GCAGTAGGTTTATAA GAAAGTAGA TTT TCTACTTTC TTCTCTTTTAAGGAT TERM 75 66591 - 66611 + F 95 -11.3 -3.95836 | opp_overlap 66591 66595, overlap 66586 66595 GCAGTAGGTTTATAA GAAAGTAGA TTT TCTACTTTC TTCTCTTTTAAGGAT TERM 76 66607 - 66595 - f 72 -6.3 -4.31433 | opp_overlap 66591 66586 66595, overlap 66591 TAGGTTTATAAGAAA GTAGA TTT TCTAC TTTCTTCTCTTTTAA TERM 77 66595 - 66607 + F 76 -6.3 -4.57063 | opp_overlap 66595 66591, overlap 66591 66586 TAGGTTTATAAGAAA GTAGA TTT TCTAC TTTCTTCTCTTTTAA murI 66631 - 67371 + | glutamate racemase ansA 67472 - 68518 + | L-asparaginase TERM 78 68511 - 68493 - f 70 -5.4 -4.65916 | overlap 68501 GCGATCCTAAGAAAA TTCAAGAA TAT TTCTTAAA ATACTAAAATCTTTA TERM 79 68528 - 68556 + F 75 -9.7 -2.65906 | opp_overlap 68530 68536, overlap 68527 68526 68530 TACTAAAATCTTTAA CACCTAAATGCTA CAA TAACATTTGGGTG GATTTTTCAATTAAA rbr 68602 - 69249 + | rubrerythrin TERM 80 69297 - 69259 - f 81 -7.7 -4.6902 | opp_overlap 69259, overlap 69271 GGATAATTTTAAAAA CCTTGATAAAAATGATA AAATA TTTTATTTTTATCAAGG TCTAATATGCAAATT TERM 81 69259 - 69297 + F 79 -9.9 -2.85847 | opp_overlap 69259 69271 GGATAATTTTAAAAA CCTTGATAAAAATGATA AAATA TTTTATTTTTATCAAGG TCTAATATGCAAATT Cla_0082 69304 - 69777 + | hypothetical protein rnhB 69777 - 70328 + | ribonuclease HII TERM 82 70650 - 70688 + F 86 -7.1 -5.00616 | opp_overlap 70650 70653 AGCATATTCGTAAAA TAATACAAAAAGTTTTT TAGGT AAAAGCTTTTTTTATTA TTTTTTACAAGGAGA TERM 83 71973 - 71953 - g 81 -4.7 -5.46698 | opp_overlap 71954, overlap 71945 71954 TCTAAAATGAAAAAA TTCCAAAAC AAA GCTTTGGAT GCATTTGTATTTATC TERM 84 71972 - 71954 - g 77 -8.2 -3.86392 | opp_overlap 71954, overlap 71945 71953 CTAAAATGAAAAAAT TCCAAAAC AAA GCTTTGGA TGCATTTGTATTTAT sdaC 70708 - 72030 + | L-serine transporter TERM 85 73378 - 73366 - g 71 -4.7 -4.77047 | opp_overlap 73375 CAAAATACAAAGAAA CCTCC TTA GGTGG CTTAGCTACTAATCT sdaA 72042 - 73409 + | L-serine dehydratase TERM 86 73412 - 73433 + F 82 -6.7 -4.86621 | opp_overlap 73412 73413 73427 73428, overlap 73413 AAGTGTATGTTAAAA TCTTAAGTT TTAG AACTTAAGG TTTTTCCTTAAAGCT TERM 87 73413 - 73432 + F 74 -8 -3.5125 | opp_overlap 73412 73413 73427 73428, overlap 73412 AGTGTATGTTAAAAT CTTAAGTT TTAG AACTTAAG GTTTTTCCTTAAAGC TERM 88 74194 - 74208 + G 77 -8.6 -3.6947 | AGATGGTTTAAATGC TGCTCA TTA TGAGCA TTGTGTTGCCATTAT map 73499 - 74254 + | methionine aminopeptidase TERM 89 74244 - 74281 + T 70 -3.6 -5.2197 | opp_overlap 74237 74251 74255, overlap 74246 GTAAGGCAGATATTT TATCTAAGTAAGAAAG TTTAGT CTTTCTTACTCAAATG TTTTTAGTTTTTCTG TERM 90 74274 - 74251 - T 71 -8.3 -3.07622 | opp_overlap 74246 74244, overlap 74255 AGATATTTTATCTAA GTAAGAAAG TTTAGT CTTTCTTAC TCAAATGTTTTTAGT Cla_0087 76073 - 74271 - | MCP-domain signal transduction protein Cla_0088 76977 - 76057 - | cytochrome c551 peroxidase Cla_0089 78323 - 77034 - | conserved hypothetical protein, probable MFS transporter TERM 91 78230 - 78205 - G 77 -5.7 -5.00616 | gap 1 TCGTTTGGGAAAAAA TTTTTTGC-AAT ATA ATTAGCAAAAAA GACAAAAATCACAAA infA 78457 - 78675 + | translation initiation factor IF-1 rpmJ 78851 - 78964 + | 50S ribosomal protein L36 rpsM 78968 - 79333 + | 30S ribosomal protein S13 rpsK 79343 - 79735 + | 30S ribosomal protein S11 rpsD 79766 - 80392 + | 30S ribosomal protein S4 TERM 92 80678 - 80668 - g 76 -2.6 -5.54192 | overlap 80674 ATCAATCTAAAAAAA TTAA GAT TTAA ACTAAAAACAGATTC TERM 93 81060 - 81048 - g 76 -6.3 -4.57569 | opp_overlap 81035 TGATGCTTTTAAAAA TGCTT TAG AAGCA ATGTATAAACAATTA rpoA 80407 - 81420 + | DNA-directed RNA polymerase, alpha subunit rplQ 81424 - 81777 + | 50S ribosomal protein L17 TERM 94 81777 - 81804 + F 85 -8.6 -4.42047 | overlap 81776 81778 CGAATTTGTAGCTTG ATTTTTAGCCTT TTTA AAGGCTAAAAAC TTCTTCTTTTTTACT TERM 95 81778 - 81803 + F 91 -12.1 -3.22788 | overlap 81777 81776 GAATTTGTAGCTTGA TTTTTAGCCTT TTTA AAGGCTAAAAA CTTCTTCTTTTTTAC hisG 81888 - 82787 + | ATP phosphoribosyltransferase hisD 82797 - 84077 + | histidinol dehydrogenase TERM 96 84262 - 84276 + G 75 -7.2 -4.09739 | CCTAGGCACAAATTC TTTTCC TAG GGAAAA TTTTGACAAGGTTCA hisB 84074 - 85141 + | imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase Cla_0100 85175 - 85906 + | hypothetical protein hisH1 85928 - 86509 + | imidazoleglycerol phosphate synthase, glutamine amidotransferase subunit hisA 86516 - 87250 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase hisF1 87232 - 87999 + | imidazoleglycerol phosphate synthase, cyclase subunit TERM 97 88078 - 88096 + G 80 -9 -3.83864 | ATAACCTTATCCCCG TGATAATC CAA GATTATCA TTCTTGTGAAGTTTT hisIE 88011 - 88637 + | phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP pyrophosphohydrolase Cla_0105 88760 - 89905 + | MCP-domain signal transduction protein TERM 98 89937 - 89912 - f 83 -9.1 -3.99405 | opp_overlap 89917, overlap 89913 TCAAGCTAGTATAAA GTTAAGCGTGA TTTC TCACGCTTAAT TAAGCAATATTTTTG TERM 99 89936 - 89913 - f 100 -12.6 -2.99161 | opp_overlap 89917, overlap 89912 CAAGCTAGTATAAAG TTAAGCGTGA TTTC TCACGCTTAA TTAAGCAATATTTTT TERM 100 89917 - 89932 + F 77 -9 -3.34522 | opp_overlap 89913 89912 CTAGTATAAAGTTAA GCGTGA TTTC TCACGC TTAATTAAGCAATAT TERM 101 90254 - 90240 - g 77 -7.2 -4.20712 | TATAACACTTTAAAA CATATC AAA GATATG ACTCCTGAAGAATTA Cla_0106 90135 - 90857 + | hypothetical protein TERM 102 91398 - 91388 - g 71 -6.8 -3.88232 | TTTCGTAGATAATAA CGGT TAC ACCG TTCAAGGCTGGAATT TERM 103 93165 - 93148 - g 72 -6.3 -4.26189 | TTACAAATGGTAAAA CTCTAGC TTTA GCTAAAG TAGCTCTAGCGACCT flgE1 90993 - 93437 + | flagellar hook protein FlgE TERM 104 93476 - 93435 - T 77 -7.5 -4.32402 | gap 1, opp_overlap 93438 93439 93472 93475, overlap 93438 93439 CTTCAATTAAAACAA TAATCTTAA-CCCAAGGTTT TAA AAACCTTGGGATCAAGCTTT ACAAGGTTATTAAGG TERM 105 93473 - 93438 - T 86 -9.2 -4.26559 | gap 1, opp_overlap 93438 93439 93472, overlap 93435 93439 CAATTAAAACAATAA TCTTAA-CCCAAGGTTT TAA AAACCTTGGGATCAAGC TTTACAAGGTTATTA TERM 106 93472 - 93439 - T 100 -12.7 -3.14308 | gap 1, opp_overlap 93438 93439, overlap 93438 93435 AATTAAAACAATAAT CTTAA-CCCAAGGTTT TAA AAACCTTGGGATCAAG CTTTACAAGGTTATT TERM 107 93439 - 93472 + T 82 -10.5 -2.75066 | gap 1, opp_overlap 93439 93438 93435, overlap 93438 AATTAAAACAATAAT CTT-AACCCAAGGTTT TAA AAACCTTGGGATCAAG CTTTACAAGGTTATT Cla_0108 94186 - 93605 - | hypothetical protein TERM 108 93945 - 93957 + g 79 -7.7 -4.32951 | GATAAAATGCTAGTG CCACA AAG TGTGG TTTCTTGGTTAAAAT TERM 109 94096 - 94106 + g 78 -4 -5.47399 | TGTTGATTCTAAGTC CAAA GTC TTTG TTTTTTTCAAGTTCA TERM 110 94312 - 94342 + r 77 -4.9 -5.19819 | gap 1, opp_overlap 94319, overlap 94314 94315 TTCAAAAATATTGCT TAA-TTAAGCGTGA GAAA TCACGCTTAACTTC TTTTTGATTTTATTT TERM 111 94314 - 94339 + r 91 -9.1 -4.62313 | opp_overlap 94319, overlap 94312 94315 CAAAAATATTGCTTA ATTAAGCGTGA GAAA TCACGCTTAAC TTCTTTTTGATTTTA TERM 112 94315 - 94338 + r 100 -12.6 -3.34947 | opp_overlap 94319, overlap 94314 94312 AAAAATATTGCTTAA TTAAGCGTGA GAAA TCACGCTTAA CTTCTTTTTGATTTT TERM 113 94334 - 94319 - R 77 -9 -3.34522 | opp_overlap 94315 94314 94312 ATATTGCTTAATTAA GCGTGA GAAA TCACGC TTAACTTCTTTTTGA Cla_0109 95556 - 94315 - | conserved hypothetical protein, putative drug resistance transporter, Bcr/CflA family TERM 114 94782 - 94763 - G 74 -5 -4.87592 | overlap 94764 GCACATACAACAAAA CTTAGAGC ATGA GCTCCAAA AAGGGCTGCGTATTG Cla_0110 95674 - 95949 + | conserved hypothetical protein, NifU family protein Cla_0111 95936 - 96475 + | hypothetical protein murE 96459 - 97742 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Cla_0113 97743 - 98048 + | conserved hypothetical protein (DUF149 domain protein) Cla_0114 98045 - 99124 + | hypothetical protein TERM 115 99445 - 99461 + G 71 -3 -5.243 | ATTTTAGTAGGTGAT GCTTTA AATAC TGAAGC TTTTTTACTACTTTC TERM 116 99912 - 99902 - g 72 -2.6 -5.46657 | opp_overlap 99909, overlap 99910 TATGTGAAGAAAAAA TAAA AAA TTTA GACTCTAAGCTTGCT ispA 99121 - 99969 + | geranyltranstransferase TERM 117 100476 - 100492 + G 71 -6.7 -4.00038 | TGGGCTTCATAAGCT TGATAAT TTA ATTATCA TTTATGATAGTAATA tkt 99973 - 101877 + | transketolase iamB 101867 - 102979 + | putative ABC transporter, permease protein (DUF140 domain protein) iamA 102976 - 103698 + | putative ABC transporter, ATP-binding protein TERM 118 104316 - 104302 - g 85 -7.2 -4.97824 | opp_overlap 104307, overlap 104306 104307 AAAATTTAAATAAAA CAAGTT CTA AACTTG GTAAAAGTTCAGATG Cla_0119 103698 - 104525 + | putative ABC transporter, periplasmic substrate-binding protein TERM 119 104779 - 104795 + G 79 -5.9 -5.12707 | TGGAAAGAAAATCCT GCTTTGA TGA TTAAAGC TTTTTTGGAATTTCA TERM 120 104993 - 104983 - g 78 -4 -5.34055 | overlap 104973 ATAAATACTAAAAAA CTTA TAG TAAG TAAGTATTTTTACTA Cla_0120 104527 - 105120 + | conserved hypothetical lipoprotein Cla_0121 105164 - 105685 + | hypothetical protein TERM 121 105684 - 105712 + T 75 -9 -3.19824 | opp_overlap 105686, overlap 105683 105679 105686 CTAAGCTTTTTAAAT AATACTAAAGGC AAAAA GCCTTTAGTATG TGTATTACTTAATAA TERM 122 105686 - 105710 + T 90 -11.6 -3.15548 | opp_overlap 105686, overlap 105684 105683 105679 AAGCTTTTTAAATAA TACTAAAGGC AAAAA GCCTTTAGTA TGTGTATTACTTAAT TERM 123 105710 - 105686 - T 100 -11.6 -3.91488 | opp_overlap 105686 105684 105683 105679 AAGCTTTTTAAATAA TACTAAAGGC AAAAA GCCTTTAGTA TGTGTATTACTTAAT sodC 106256 - 105717 - | superoxide dismutase (Cu/Zn) Cla_0123 106359 - 107237 + | conserved hypothetical protein, putative transcriptional regulator (AraC family) TERM 124 107642 - 107627 - g 76 -2.6 -5.54079 | GTAAAAAGCAAAAAA GAAATT TTCA AACTTC CTATAAAAAATGCAG Cla_0124 107303 - 108139 + | conserved hypothetical protein, probable ATP/GTP-binding protein TERM 125 108166 - 108143 - T 100 -12.6 -5.09245 | opp_overlap 108154 GTAAAATTATAAAAA CTTTTAAGCC TTTT GGCTTAAAAG TCAAATAATTCTCCA Cla_0125 108417 - 108160 - | hypothetical protein ung 109156 - 108467 - | uracil-DNA glycosylase Cla_0127 110472 - 109165 - | two-component sensor histidine kinase Cla_0128 111148 - 110462 - | two-component response regulator TERM 126 111036 - 111064 + g 77 -8.9 -3.58037 | opp_overlap 111062 TAAGCTTTTTCTAGT GCCTCTTGTGCAT CAT ATACACAAGAGAC TTTAAAGCCTTCATC Cla_0129 111566 - 111150 - | conserved hypothetical protein (DUF1104 domain protein) Cla_0130 112381 - 111629 - | hypothetical protein TERM 127 111918 - 111936 + g 81 -8.2 -4.27033 | opp_overlap 111917 111918 TTAAAAGAAATTAAG GCATTGGT AGT ACTAATGC TTTCTATATCTTTTA mutY 112471 - 113499 + | A/G-specific adenine glycosylase Cla_0132 113489 - 114346 + | radical SAM domain protein Cla_0133 115199 - 114330 - | hypothetical protein Cla_0135 116102 - 115452 - | hypothetical protein ktrA 116937 - 116296 - | TRK system potassium uptake protein TrkA, putative ktrB 118277 - 116934 - | TRK system potassium uptake protein TrkB, putative TERM 128 117907 - 117894 - G 76 -2.5 -5.56264 | overlap 117901 GGCAAATACAAAAAA TAAAA CCTT TTTTA AAAATCCTACAAGGC TERM 129 118357 - 118335 - R 95 -11.4 -4.22352 | overlap 118332 TAAATAAAAAGAGAA CTTTCCACCT TAA AAGTGGAAAG TAAAAGTATTAAAGC Cla_0139 119700 - 118366 - | anaerobic C4-dicarboxylate transporter aspA 121132 - 119720 - | aspartate ammonia-lyase TERM 130 119856 - 119872 + g 75 -5.9 -4.8048 | overlap 119842 GTTTCTAAAGCTTCT TTAGCAA TAC TTGCTGA TTTTTCATATCCCAA TERM 131 121488 - 121522 + r 100 -13.1 -3.57883 | opp_overlap 121491 121495, overlap 121491 CCTTAGTTCGTTAAC TGATCAACTAAACCC GTTAA GGGTTTGGTTGATTA TTTAAAACCTCTTCT TERM 132 121519 - 121491 - R 81 -10.4 -2.52676 | opp_overlap 121488 121491, overlap 121495 TAGTTCGTTAACTGA TCAACTAAACCC GTTAA GGGTTTGGTTGA TTATTTAAAACCTCT TERM 133 121491 - 121519 + r 100 -12.6 -3.91984 | opp_overlap 121491 121495, overlap 121488 TAGTTCGTTAACTGA TCAACTAAACCC GTTAA GGGTTTGGTTGA TTATTTAAAACCTCT Cla_0141 123500 - 121524 - | MCP-domain signal transduction protein TERM 134 122385 - 122409 + g 81 -6.5 -5.1166 | overlap 122402 AACTGATTGTTCTAC TGCTTTAGCAT CTT GTTCTAAAGCA TTTTTAGTTTTAGTG TERM 135 123669 - 123641 - R 91 -11.2 -3.71991 | opp_overlap 123644, overlap 123644 TAGAAAGCGTAAGAA TAACTAGCAAGC CTAAT ACTTGCTAGTTA CTCAATTAAAACCTC TERM 136 123644 - 123666 + r 70 -7.8 -3.21912 | opp_overlap 123641 123644 AAAGCGTAAGAATAA CTAGCAAG CCTAATA CTTGCTAG TTACTCAATTAAAAC TERM 137 123666 - 123644 - R 82 -8.5 -3.97741 | opp_overlap 123644, overlap 123641 AAAGCGTAAGAATAA CTAGCAAGC CTAAT ACTTGCTAG TTACTCAATTAAAAC TERM 138 124462 - 124484 + r 70 -7.8 -3.14878 | overlap 124460 124466 124483 ATTAATTGAGGATTA GCAGGAATAG CTG TTATTCTTGC TGTTAAATTACCAGC Cla_0143 126831 - 125710 - | hypothetical protein Cla_0144 127107 - 126844 - | hypothetical protein moaC 127558 - 127085 - | molybdenum cofactor biosynthesis protein C Cla_0146 127646 - 127807 + | hypothetical protein TERM 139 127884 - 127894 + G 78 -4 -5.41787 | GACTTTAGAATTTTA TGAT TTT ATCA TTTTTGTATTTTTTG TERM 140 128089 - 128099 + G 70 -5.4 -4.59117 | overlap 128087 AGTATTTTACTGATG GTTG TGC CAAC TTTTATGCTTGCTTT TERM 141 128368 - 128379 + G 72 -4.4 -5.10461 | overlap 128369 128375 CTTTATGAGTGGGCT TGGA GAAT TCCA TTTTTCTTAGGTGGA Cla_0147 127810 - 129120 + | putative transporter, major facilitator superfamily Cla_0148 129565 - 129089 - | hypothetical protein TERM 142 129792 - 129780 - g 71 -3.3 -5.26875 | TTTTTAATGAAAAAA TCGGC ACA GACGA TGAGAGTTGGAAAAA Cla_0149 129674 - 130057 + | hypothetical protein Cla_0150 130755 - 130072 - | hypothetical protein Cla_0151 131026 - 130745 - | hypothetical protein TERM 143 130838 - 130848 + g 81 -2.6 -5.70522 | TAAAGTCATTATGTT TTTT TCT AAAA TTTTTTGTTCTTCTT eno 132267 - 131023 - | enolase recA 133301 - 132267 - | recombinase A TERM 144 133234 - 133246 + g 74 -6.3 -4.39002 | opp_overlap 133234 133229 AGTCTTAAAATAGTA CCTTT TCC AAAGG TTTTATCAAGACTTT TERM 145 133370 - 133386 + H 70 -2.3 -5.59502 | overlap 133338 133373 ATAAGTTTTTATTTT GAATTTT GCT AAAATAC TTTTTTAATTTTTTC Cla_0154 133412 - 134275 + | conserved hypothetical protein (DUF191 domain protein) fliQ 134302 - 134568 + | flagellar biosynthesis protein FliQ TERM 146 134562 - 134575 + F 77 -5.3 -4.91459 | AATTCCAAGCTTTAT TCGAT GATT ATCGA TTTTTCTAAATATTC murB 134565 - 135341 + | UDP-N-acetylenolpyruvoylglucosamine reductase Cla_0157 135984 - 135334 - | hypothetical protein TERM 147 135389 - 135399 + g 70 -4 -5.00267 | overlap 135385 135392 ATTTCTTGGACTAAT TCTT GAT AAGA TTTATTTTTATCATT TERM 148 135698 - 135712 + g 74 -7.2 -3.9392 | opp_overlap 135697 135698, overlap 135683 135710 TTTTGACTAAGCAAG GCAAAA TTA TTTTGC TTATTTAAAATAGCA cysQ 136679 - 135984 - | 3'(2'),5'-bisphosphate nucleotidase TERM 149 136362 - 136377 + g 70 -6.2 -4.18506 | TTTAGTATGAGCATG TGCATA ATAG TATGCA TTATTTTCCACATCG TERM 150 136522 - 136538 + g 74 -8.1 -3.55261 | overlap 136520 TACTCTAAATTTTTT CTTTCTT CAT AAGAAAG TATGTTTTCTTCAGA TERM 151 136796 - 136772 - R 84 -10.2 -3.62348 | opp_overlap 136772 136771, overlap 136770 AATTTTATATAAATA CTTAGTAGAA TTATT TTCTACTAAG ATTATTGATAAATTT TERM 152 136772 - 136796 + r 79 -10.2 -2.84982 | opp_overlap 136770 136772, overlap 136771 AATTTTATATAAATA CTTAGTAGAA TTATT TTCTACTAAG ATTATTGATAAATTT Cla_0159 137960 - 136782 - | Na+/H+ antiporter bioB 138777 - 137941 - | biotin synthetase topA 140864 - 138777 - | DNA topoisomerase I TERM 153 140033 - 140044 + g 74 -3 -5.47399 | CATAAAGCTTTTGAG CTAT CATC ATAG TTTTTTTAGGGTTAA TERM 154 140625 - 140646 + g 85 -4.5 -5.56112 | GCGATCCTCATCGGT TGCAAGATA GATT TGTTTTGCA TTTTTTGCTTTTTCT TERM 155 141885 - 141865 - g 77 -8.5 -3.73936 | opp_overlap 141870, overlap 141870 AAATTTGATCAAGAA CAAAATAAA TTT TTTATTTTG CAAAATTTAGATTAT maf2 140995 - 142707 + | motility accessory factor TERM 156 142686 - 142717 + F 82 -3.3 -5.83822 | opp_overlap 142686 AGCTATTAAGCAATA TAAAAATATTTTA AAAGTA TAAATTATTTTTA TTTTTTTTCGATATA flaA 142783 - 144492 + | flagellin TERM 157 144524 - 144507 - f 89 -11.3 -3.57561 | opp_overlap 144507 GTCTAATTTTCCAAA CGCCTTG TTTT CAAGGCG TTTTCTTCTTTTTAT TERM 158 144507 - 144524 + F 100 -11.3 -5.18715 | opp_overlap 144507 GTCTAATTTTCCAAA CGCCTTG TTTT CAAGGCG TTTTCTTCTTTTTAT TERM 159 144556 - 144578 + F 70 -6.4 -4.15788 | overlap 144559 144566 TTTTTGGAATACTTT TTGCTTTAAA TCT TTTCAAGCAA TTTATTGAAAGGATT flaB 144598 - 146307 + | flagellin TERM 160 146314 - 146333 + T 89 -10.8 -3.80083 | opp_overlap 146308 146305 TTACAATAATCCTAG GTGGGTTT TTAA AAACCCAC TTTAAATTAAGTTTT maf3 148212 - 146335 - | motility accessory factor TERM 161 146638 - 146648 + g 74 -3.2 -5.37593 | TTCATTAAGAGTATA GCGA GTT TTGC TTTTTTGATTTAAAG maf4 150075 - 148222 - | motility accessory factor maf5 151804 - 150068 - | motility accessory factor maf6 153737 - 151821 - | motility accessory factor TERM 162 152435 - 152446 + g 89 -3 -6.2845 | TGTTAAAATTATCTC TTAC AAAA GTAA TTTTTTTTTCTAATT TERM 163 153037 - 153050 + g 71 -2.4 -5.38398 | GTGGAGACTATAATG GCAT TTTTAC ATGC TTTTTCTCTTTTTGT pseI 154775 - 153741 - | N-acetylneuraminic acid synthetase TERM 164 153857 - 153880 + g 81 -8.4 -4.3179 | AATTTGGCCTTATGC TTTTTACATT TTCT AATGTAAAAA TTTCTCCTTTTTTAA TERM 165 153918 - 153943 + g 75 -4.1 -5.18357 | overlap 153919 GCTTGCATATAAACT TCTTGCAAAAT GGCG ATTTTTCAAGG TTTTTTCATCCATTG TERM 166 155271 - 155255 - g 89 -6.7 -5.34381 | opp_overlap 155264 AAACTCAAAGAAAAA TTTACTT ATG AAGTAAA AAATGCTTCCTTTAG Cla_0170 154886 - 155308 + | hypothetical protein fliN 155305 - 155601 + | flagellar motor switch protein FliN TERM 167 155859 - 155827 - g 78 -3 -5.55664 | GCATTATTAAAAAAA TAAAAATTTTTTCA GAAGA CAAAAAAACTTTTA TAGCTTTAAGTGTTG Cla_0172 155598 - 156356 + | hypothetical protein TERM 168 156365 - 156399 + T 79 -3.7 -5.77856 | opp_overlap 156372, overlap 156366 TACTTAATTAGATTG ATTAAAAGCTAAAAC AATAA GTTTTGGCTTTGAAA TTTTTTTGATTTCTT TERM 169 156366 - 156398 + T 75 -7.2 -4.03053 | opp_overlap 156372, overlap 156365 ACTTAATTAGATTGA TTAAAAGCTAAAAC AATAA GTTTTGGCTTTGAA ATTTTTTTGATTTCT Cla_0173 157849 - 156353 - | phosphatase, Ppx/GppA family TERM 170 157428 - 157452 + g 73 -9.4 -2.50471 | gap 1, overlap 157427 157427 CAAAGCTCGGTTGAT CCACCACCTAT GTCT AT-GGTGGTGG CATTTTGAATATTTG TERM 171 157689 - 157701 + g 72 -4.1 -5.01823 | GCCTTAAGCATGGCT TCTTC TTG GAGGA TTTTGTTGTTATTAT fdxB 158094 - 157849 - | ferredoxin TERM 172 158205 - 158177 - R 86 -10.6 -3.32832 | opp_overlap 158177 158199 GGTAAAAATATTTAA TTTTTAGAATGA TCAAG TCATTCTAAAAA TTTTTAGTTAGTTTT TERM 173 158177 - 158205 + r 100 -11.3 -4.97312 | opp_overlap 158177, overlap 158199 GGTAAAAATATTTAA TTTTTAGAATGAT CAA GTCATTCTAAAAA TTTTTAGTTAGTTTT Cla_0175 158883 - 158209 - | two-component response regulator folB 159278 - 158961 - | dihydroneopterin aldolase Cla_0177 159874 - 159263 - | conserved hypothetical protein (DUF205 domain protein) TERM 174 159946 - 159925 - H 78 -4.5 -5.31545 | opp_overlap 159925 AATAATAGCAAAAAA CTCTAAAAT AAAT ATTTAAGAG ATATTTTATCTTATA TERM 175 159966 - 159985 + H 82 -3 -5.95449 | overlap 159960 TTTATCTTATAATAA TTTTTATT GTTA AATAGAAA TTTTTTATTTTATTT TERM 176 160743 - 160726 - g 81 -2.7 -5.77571 | opp_overlap 160733 AGTAAAAAAGAAAAA GAAGGTT TGAA AACTTTC ATTGATAAAGGCTGT Cla_0178 160075 - 161109 + | cytochrome c551 peroxidase TERM 177 161110 - 161145 + F 100 -8.6 -6.11392 | gap 1, opp_overlap 161115 161116, overlap 161116 AAACCAGAACTTTAA TAAAATTTCCCTAAAGA TAT TCTTTAGGG-AATGTTA TTTTTTTGTTTATTT TERM 178 161141 - 161115 - f 100 -11 -4.68705 | opp_overlap 161110 161116, overlap 161116 AGAACTTTAATAAAA TTTCCCTAAAGA TAT TCTTTAGGGAAT GTTATTTTTTTGTTT TERM 179 161116 - 161140 + F 100 -14.5 -4.06218 | opp_overlap 161115 161116, overlap 161110 GAACTTTAATAAAAT TTCCCTAAAGA TAT TCTTTAGGGAA TGTTATTTTTTTGTT TERM 180 161140 - 161116 - f 100 -14.5 -3.40139 | opp_overlap 161116 161110, overlap 161115 GAACTTTAATAAAAT TTCCCTAAAGA TAT TCTTTAGGGAA TGTTATTTTTTTGTT TERM 181 162141 - 162121 - g 81 -2.6 -5.81032 | opp_overlap 162121 CAACTTTAAAAAAAA GAAATTCA TCTTT TGAATATC TTAGTGTAAATGATA Cla_0179 161202 - 162548 + | conserved hypothetical lipoprotein Cla_0180 162566 - 163195 + | conserved hypothetical lipoprotein TERM 182 164120 - 164109 - g 74 -3 -5.48303 | ATAATGCTAAAAAAA CTAA TATA TTAG AAGATAGGGCAAAAG TERM 183 164143 - 164173 + G 93 -10.6 -3.92075 | opp_overlap 164141 164142 164139 164151 164169 GGCAAAAGATACAGC TTCAACTATGGCTG ATG CAGCTATAATTGAA TTTATCAATACAAAT Cla_0181 163220 - 164563 + | hypothetical protein Cla_0182 164573 - 165730 + | hypothetical protein TERM 184 165769 - 165785 + F 74 -5.2 -4.85433 | TGAGTATAATCTCAA GCTTTA ACCAC TAAAGC TTTTTAAATTTATGT rplU 165855 - 166163 + | 50S ribosomal protein L21 rpmA 166174 - 166428 + | 50S ribosomal protein L27 TERM 185 166435 - 166449 + F 100 -10 -5.51353 | CCTGCATAATTTTAA GGCTAC TTT GTAGCC TTTTTCTTCTTTTTA obg 166524 - 167567 + | GTP-binding protein, GTP1/Obg family TERM 186 168575 - 168559 - g 76 -3.7 -5.49809 | opp_overlap 168559 GAAAGTGGAAAAAAA GTTTTAG ATG CTAAGAC TTATCTAAATGGAAA fmt 167710 - 168621 + | 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase birA 168602 - 169237 + | biotin--acetyl-CoA-carboxylase ligase parA 169234 - 170016 + | chromosome partitioning protein ParA TERM 187 170644 - 170627 - g 95 -7.1 -5.70522 | overlap 170632 AAGAAGAAGAAAAAA TGATAGT TGAT ACTATCA TCGGGCAAAAACTTA parB 170020 - 170871 + | chromosome partitioning protein ParB atpF' 170935 - 171360 + | ATP synthase F0 sector, B' subunit atpF 171370 - 171882 + | ATP synthase F0 sector, B subunit atpH 171882 - 172403 + | ATP synthase F1 sector, delta subunit atpA 172413 - 173918 + | ATP synthase F1 sector, alpha subunit TERM 188 173977 - 173965 - g 82 -6.3 -5.30448 | AAAGAAAGATAAAAA GTGTT CAT AACAC ACAAAAGACAACCAA atpG 173928 - 174812 + | ATP synthase F1 sector, gamma subunit atpD 174827 - 176281 + | ATP synthase F1 sector, beta subunit atpC 176285 - 176677 + | ATP synthase F1 sector, epsilon subunit exbB1 176677 - 177237 + | TonB system transport protein ExbB exbD1 177241 - 177627 + | TonB system transport protein ExbD tonB1 177631 - 178410 + | TonB domain protein TERM 189 178946 - 178966 + G 79 -7.7 -4.29738 | opp_overlap 178946 TCCTAAATGGGCAAA TAAAGAGCA AAA TGCTTTTTA TTTTACTGCCTATGA Cla_0200 178407 - 179606 + | translocation protein TolB precursor TERM 190 180015 - 179990 - g 79 -9.1 -3.48036 | GATGAGTATAATCAA GCTTTAGGTCT AAAA AGAGCTAAAGC GGTAAAAGAATCTTT pal 179675 - 180160 + | peptidoglycan-associated lipoprotein precursor TERM 191 180193 - 180212 + G 81 -6.4 -5.02074 | TTAAAATTATTATCA GTAGCTCT TTTA GGGGCTAC TTTTTTACACGCTGA TERM 192 180223 - 180236 + G 74 -6.7 -4.25104 | GCTACTTTTTTACAC GCTGA AATT TCAGC TTTTGATGCAGGAAA Cla_0202 180172 - 181161 + | hypothetical protein slyD 181175 - 181759 + | FKBP-type peptidyl-prolyl cis-trans isomerase fabD 181759 - 182679 + | malonyl CoA-acyl carrier protein transacylase TERM 193 183171 - 183151 - g 83 -2 -5.89921 | ATGAGAATAAAAAAA CAAAAATT AGAGA AATTTTTA ATGCTGATGCTTGTG pfs 182676 - 183362 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 194 183495 - 183516 + G 72 -6.5 -4.35926 | opp_overlap 183496, overlap 183496 TAGCTCATCTTTTAA AGCGTATGC AAGC GCATGCGCC TTTTAAATTTCAACT TERM 195 183496 - 183515 + G 78 -10 -3.20832 | opp_overlap 183496, overlap 183495 AGCTCATCTTTTAAA GCGTATGC AAGC GCATGCGC CTTTTAAATTTCAAC TERM 196 183515 - 183496 - g 72 -7.8 -3.55563 | opp_overlap 183496 183495 AGCTCATCTTTTAAA GCGTATGC AAGC GCATGCGC CTTTTAAATTTCAAC Cla_0206 183359 - 184120 + | conserved hypothetical protein, putative ATPase (PP-loop superfamily) Cla_0207 184113 - 184625 + | conserved hypothetical protein, putative amidase TERM 197 185178 - 185199 + G 73 -8.8 -3.17222 | opp_overlap 185182, overlap 185176 185175 ATATAGGAGTTTTAA TTCATCGC ATTTTA GCGATGAA TATATTGATAATTTA Cla_0208 184627 - 185241 + | hypothetical protein Cla_0209 185545 - 185225 - | hypothetical protein dusB 186533 - 185607 - | tRNA-dihydrouridine synthase B Cla_0211 187513 - 186530 - | hypothetical protein TERM 198 187011 - 187031 + g 90 -4.7 -5.72207 | opp_overlap 187011, overlap 187013 AAAGAAAAAGCATAA TTGCTATCA TTT TGAAAGCGA TTTTTTTCATTTAAA TERM 199 187035 - 187053 + g 77 -7.6 -4.15366 | opp_overlap 187048, overlap 187048 TTTTGAAAGCGATTT TTTTCATT TAA AATGAAAA TTTCATTATTTGAAT Cla_0212 187866 - 187510 - | conserved hypothetical protein, DksA-like protein Cla_0213 188330 - 187875 - | conserved hypothetical protein (DUF163 domain protein) accD 189175 - 188333 - | acetyl-CoA carboxylase, carboxyltransferase, beta subunit TERM 200 189237 - 189209 - R 74 -9.1 -3.01269 | opp_overlap 189209, overlap 189213 AATTTTGAAATTATA GCAAGATTTTA TTGCTTT TAAAATCTTGC ACCCAACATAAACTC Cla_0215 191442 - 189226 - | conserved hypothetical protein, putative outer membrane protein TERM 201 190394 - 190409 + g 72 -7.6 -3.69297 | GTTTTGGTATTACCT GAGATG ATGA CATCTC TTATATATACTTTTT TERM 202 192030 - 192044 + G 82 -8.6 -3.90464 | TATGGATAGTATTTC GCATGA TCA TCATGC TTCTATTATTTCACA tyrA 191521 - 192348 + | prephenate dehydrogenase Cla_0217 192421 - 193800 + | peptidase, M23/M37 family lpxC 193803 - 194687 + | UDP-3-0-acyl N-acetylglucosamine deacetylase Cla_0219 194699 - 195136 + | hypothetical protein TERM 203 195976 - 195960 - g 79 -5.3 -5.27769 | AGAAAAAATCAAAAA TAAATTT GCT AAATTTA GAGTCGAGCTTTTAG thrB 195145 - 196023 + | homoserine kinase Cla_0221 196048 - 196314 + | hypothetical protein TERM 204 196378 - 196364 - g 72 -4.2 -5.06585 | GAAATTATAGAAAAA GCCAAT GAA ATGGGC TTAGAAGATATCAAA TERM 205 196597 - 196582 - g 75 -4.6 -5.1517 | overlap 196584 AAAAGAAAGTAAAAA CCCTGC TAAA GCAGTG AGTGAAAAAAAAGAT infB 196295 - 198928 + | translation initiation factor IF-2 rbfA 198925 - 199287 + | ribosome-binding factor A Cla_0224 199277 - 199699 + | conserved hypothetical protein (DUF150 domain protein) TERM 206 199956 - 199975 + GT 84 -9.4 -3.71265 | opp_overlap 199960 199968, overlap 199960 199968 AAAAGCTATGTAGCT GAAATAGC AAAG GCTATTTC TTTAGCTGATGTGTT Cla_0226 201036 - 200377 - | conserved hypothetical protein (DUF285 domain protein) Cla_0225 199821 - 200447 + | conserved hypothetical protein, putative endonuclease TERM 207 201638 - 201622 - g 81 -9.5 -3.58329 | opp_overlap 201613, overlap 201613 TAAAGAGCTTTTAAA GCCATTT TTA AAATGGC AAAAATCAAGTTTTA TERM 208 202069 - 202084 + G 83 -7.6 -4.58663 | opp_overlap 202069 AGATTTAAAGCTAAA GCCTTT ATAC AAAGGC TTTTTAGAAAATGAT TERM 209 202084 - 202069 - g 74 -7.6 -3.86311 | opp_overlap 202069 AGATTTAAAGCTAAA GCCTTT ATAC AAAGGC TTTTTAGAAAATGAT ribD 201140 - 202132 + | riboflavin biosynthesis protein pspA 203022 - 202129 - | protease IV Cla_0229 204233 - 203010 - | amidohydrolase family protein TERM 210 203121 - 203141 + g 85 -5.5 -5.37593 | opp_overlap 203120 203121, overlap 203123 TGGTAGTTTAAATAC GCTAAAATC AGC GATTTTACC TTTTTTAATTTCGCC aroQ 204322 - 204804 + | 3-dehydroquinate dehydratase TERM 211 204863 - 204893 + G 85 -7.8 -4.75372 | opp_overlap 204864 CTATTCTTGCGATAA TGCTTTATTTTTAA AAC TTGAAGATGAAGCA TTTTTCATCACTGAT TERM 212 204965 - 204947 - g 74 -3.2 -5.42265 | TGAAATGATAAAAAA TGCTAA GGTGGTT TTAGCA CAAGATCTTTTTGCT pepQ 204801 - 205826 + | prolidase (Xaa-Pro dipeptidase) TERM 213 205855 - 205873 + G 71 -7.6 -3.50133 | opp_overlap 205855, overlap 205854 GGAGCTAGAAGGATA GAAAAAAA TTG TTTTTTTC CTTTTTATACAACTA TERM 214 206012 - 205994 - g 70 -8.2 -3.13553 | overlap 205993 TAATGCAAGATAAAC GCTTGCAA GTG TTGCAAAC CTCGCCATTTTTGAT folK 205828 - 206301 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase flhF 206310 - 207695 + | flagellar biosynthesis (GTP-binding) protein FlhF Cla_0234 207688 - 208551 + | conserved hypothetical protein, ATPase, ParA family Cla_0235 208567 - 208926 + | hypothetical protein TERM 215 209334 - 209318 - g 74 -6.5 -4.47007 | GAAAAAGTAAAAGAA GCAAGAG CAG CTCATGC AATCTCGCTTGTGAT fliA 208913 - 209599 + | flagellar biosynthesis sigma factor, sigma-F fliM 209600 - 210691 + | flagellar motor switch protein FliM fliY 210681 - 211520 + | flagellar motor switch protein FliY Cla_0239 211517 - 212152 + | lysine decarboxylase family protein TERM 216 212822 - 212839 + GT 73 -5.5 -4.66938 | AGGTTTTGAGGTGCG TGGGGCT CATG AGCCACA TTTTGTATTAAAAAT trmU 212115 - 213131 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 217 213125 - 213164 + T 71 -8.6 -2.99161 | opp_overlap 213128 213132 213139, overlap 213139 TGCAAGTGGATTTAT AAATTAACGCCAAAGGGT TGCA ACCCTTTGGCGTTGAACC CTTTATACTAACTTC TERM 218 213161 - 213128 - T 100 -16.9 -3.92641 | opp_overlap 213125 213139, overlap 213132 213139 AAGTGGATTTATAAA TTAACGCCAAAGGGT TGCA ACCCTTTGGCGTTGA ACCCTTTATACTAAC TERM 219 213157 - 213132 - T 100 -17.7 -3.61988 | opp_overlap 213125 213139, overlap 213128 213139 GGATTTATAAATTAA CGCCAAAGGGT TGCA ACCCTTTGGCG TTGAACCCTTTATAC TERM 220 213139 - 213165 + T 71 -6.7 -3.99806 | opp_overlap 213132 213128 213139, overlap 213125 TAAATTAACGCCAAA GGGTTGCAAC-CC TTT GGCGTTG-AACCC TTTATACTAACTTCT TERM 221 213237 - 213276 + T 89 -10.5 -3.69256 | gap 1 AAATTATAGTTGGGA TTTTTCTAAGAT-AGATT AAGTA AATCTTATCTTAGAAAAA TTATATTAGATAAGT Cla_0241 213719 - 213297 - | hypothetical protein, possible lipoprotein pgpA 214278 - 213787 - | phosphatidylglycerophosphatase A Cla_0243 215441 - 214281 - | sulfate adenylyltransferase, putative TERM 222 214436 - 214418 - G 85 -8.2 -4.60889 | AACGATTTGGAAAAA GCTCTGAT AAA ATCAAAGC AGAAATTTCTCTTCT TERM 223 215016 - 215030 + g 70 -5.8 -4.32669 | overlap 215012 GTTTAATCTTTTTTT GATTTT TTC AAAATC TTCTTTTATAGCCTT Cla_0244 216294 - 215419 - | conserved hypothetical protein, putative two-component response regulator ispDF 217406 - 216291 - | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein (IspD/IspF) TERM 224 216918 - 216932 + g 82 -5 -5.44721 | opp_overlap 216913, overlap 216913 ATCAGTGAAATTTGA GCTTTG CTC TAAAGC TTTTTTTAGCATACT mrp 217514 - 218617 + | ATP/GTP-binding protein TERM 225 218988 - 219001 + G 70 -3.9 -5.15682 | AAGGAAAATTTTAGA GAAAA TGCT TTTTC TTTTGTTTGTATTTT dapD 218628 - 219791 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 226 219810 - 219794 - T 93 -10.9 -4.36262 | opp_overlap 219794 AGATTTACATTAAAA GTAGGGA AAT TCCCTAC TTTTTATAAAGAGCA TERM 227 219794 - 219810 + T 100 -10.9 -4.82901 | opp_overlap 219794 AGATTTACATTAAAA GTAGGGA AAT TCCCTAC TTTTTATAAAGAGCA Cla_0248 220263 - 219814 - | conserved hypothetical protein, putative bacterioferritin TERM 228 220332 - 220302 - R 71 -5 -4.76193 | opp_overlap 220305 220310 220327 AATTATAACATAAAA TTCTTAAATAATAA TTA TTATTATCTAATAA ATTATGATATTATAA pgi 221615 - 220392 - | glucose-6-phosphate isomerase TERM 229 220919 - 220904 - G 82 -5.4 -5.4505 | opp_overlap 220904 CTCCGTAAGAAAAAA GCACAT TAAT ATGCGC ACTTTTATGCGTGCA TERM 230 221393 - 221381 - G 70 -4.1 -4.93877 | overlap 221376 CTTGATCAAATAAAA GCTCT TTT AAAGC TTTAACCCCACAACT galU 222433 - 221609 - | UTP-glucose-1-phosphate uridylyltransferase Cla_0251 222508 - 223089 + | hypothetical protein TERM 231 223082 - 223105 + T 89 -8.2 -4.84017 | overlap 223083 TTAGCGGACTTATTT GGAAGTAAGC ATTT GCTTACTTCA TTTTTATAAAGAATT TERM 232 223083 - 223104 + T 91 -11.7 -3.49687 | overlap 223082 TAGCGGACTTATTTG GAAGTAAGC ATTT GCTTACTTC ATTTTTATAAAGAAT Cla_0252 223441 - 223109 - | hypothetical protein Cla_0253 223824 - 223492 - | hypothetical protein Cla_0254 225395 - 223821 - | ABC transporter, ATP-binding protein TERM 233 226093 - 226070 - g 70 -6 -4.27316 | overlap 226087 TTGCCGAATTTAAAA GCCTTAAGAA GATA TACTCAAGGC CTTGAAAATTTTCAT Cla_0255 225449 - 226453 + | hypothetical protein Cla_0256 226455 - 227822 + | phosphohexosemutase Cla_0257 228759 - 227803 - | tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) TERM 234 228550 - 228560 + g 85 -2.6 -5.94214 | overlap 228549 TATTTTAGTAGCTAT TTTT ACA AAAA TTTTTTTATTATATT TERM 235 228776 - 228787 + r 72 -3 -5.38951 | TATTTTTCTTAAAGC CTTA GCCA TAAG TTTTTTATCTAAATT Cla_0258 230068 - 228752 - | conserved hypothetical protein, radical SAM domain family (UPF0004 domain protein) TERM 236 230080 - 230090 + H 71 -2.6 -5.52986 | GCATTTTTCTCACTT TAAA TAT TTTA TTTTTTTGCTAAAAT prfB 230145 - 231245 + | peptide chain release factor 2 uspA 231266 - 232102 + | UspA-related nucleotide-binding protein Cla_0261 232102 - 232791 + | hypothetical protein TERM 237 232780 - 232797 + T 85 -9.9 -3.79482 | opp_overlap 232777 232780 TGGATTAACCAAGCA GGTAAGC AATA GCTTACC TTGTATTCTAATGTT TERM 238 232797 - 232780 - T 79 -9.9 -2.85896 | opp_overlap 232780, overlap 232777 TGGATTAACCAAGCA GGTAAGC AATA GCTTACC TTGTATTCTAATGTT Cla_0262 233407 - 232805 - | conserved hypothetical protein (DUF285 domain protein) TERM 239 233006 - 233021 + g 71 -7.6 -3.51924 | opp_overlap 233005 233000 GTTTTCAAACATATG TGCCAT TGTA ATGGCA TTATGTACATCCCAA TERM 240 233547 - 233498 - H 100 -7.7 -5.9003 | gap 1, opp_overlap 233506 233510 233513, overlap 233507 233508 233510 AAATTAATAAAAAAA TATAAAATACCATAATATGTTTCA TTA TGAAACATATTATAA-ATTTAATA GGAAAATTAATGTAG TERM 241 233539 - 233507 - H 93 -10.9 -4.11412 | opp_overlap 233506 233510 233513, overlap 233498 233508 233510 AAAAAATATAAAATA CCATAATATGTTTCA TTA TGAAACATATTATAA ATTTAATAGGAAAAT TERM 242 233538 - 233508 - H 91 -12.2 -3.03187 | opp_overlap 233506 233510 233513, overlap 233507 233498 233510 AAAAATATAAAATAC CATAATATGTTTCA TTA TGAAACATATTATA AATTTAATAGGAAAA TERM 243 233536 - 233510 - H 100 -12.6 -3.03085 | opp_overlap 233510 233506 233513, overlap 233508 233507 233498 AAATATAAAATACCA TAATATGTTTCA TTA TGAAACATATTA TAAATTTAATAGGAA TERM 244 233510 - 233536 + H 95 -12.6 -2.67803 | opp_overlap 233508 233507 233498 233510, overlap 233506 233513 AAATATAAAATACCA TAATATGTTTCA TTA TGAAACATATTA TAAATTTAATAGGAA TERM 245 233513 - 233533 + H 84 -9.9 -3.48807 | opp_overlap 233510 233508 233507 233498, overlap 233510 233506 TATAAAATACCATAA TATGTTTCA TTA TGAAACATA TTATAAATTTAATAG Cla_0263 233609 - 233812 + | hypothetical protein TERM 246 233873 - 233844 - T 72 -6.6 -4.28069 | opp_overlap 233845, overlap 233845 AGAGAATTTAAGAAA GTGTAATTTCCT GATACT AGGAAATTACAT TAATACTTTTACAAG TERM 247 233872 - 233845 - T 81 -10.1 -3.15757 | opp_overlap 233845, overlap 233844 GAGAATTTAAGAAAG TGTAATTTCCT GATACT AGGAAATTACA TTAATACTTTTACAA TERM 248 233845 - 233872 + T 86 -10.8 -3.37533 | opp_overlap 233844 233845 GAGAATTTAAGAAAG TGTAATTTCCTG ATAC TAGGAAATTACA TTAATACTTTTACAA Cla_0264 234911 - 233868 - | hypothetical protein Cla_0265 235023 - 235886 + | transcriptional regulator, LysR family murD 237077 - 235878 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 249 236212 - 236240 + g 71 -6.7 -3.91087 | opp_overlap 236212 236215 TTATAGCGTTTAAGA GCAGCTAAGCTAG CAT CAAGATTAGTTGC TTTAGTATCATTTAC TERM 250 236335 - 236324 - G 70 -5.8 -4.22346 | TAAACTCATTTAAAA GCTC ATAA GAGC AACGATCTAGTATGA TERM 251 236712 - 236685 - G 76 -8.6 -3.52113 | opp_overlap 236682 TTCTAAAATCCATAA TTTAGCACTAAT ATCC ATTTGTGCTAAA GGAATTCCTATATTT mraY 238135 - 237077 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 252 237913 - 237894 - G 74 -7.2 -3.89814 | overlap 237895 TCAGCACATAAAAGA CTTGCAAC TATG GTTGCAAA GATAAAAATAAGCCC pgm 238215 - 239693 + | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase fabG 239709 - 240452 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 253 240452 - 240476 + T 74 -2.8 -5.71712 | opp_overlap 240456, overlap 240456 TGGTCTTTATATGTA AAAAGCAAGG TTATC CCTTGCTTAA TTTTTTTCTATAGCA TERM 254 240472 - 240456 - T 86 -8 -4.70659 | opp_overlap 240452 240456 CTTTATATGTAAAAA GCAAGG TTATC CCTTGC TTAATTTTTTTCTAT TERM 255 240456 - 240472 + T 80 -8 -4.10161 | opp_overlap 240456, overlap 240452 CTTTATATGTAAAAA GCAAGG TTATC CCTTGC TTAATTTTTTTCTAT acpS 240823 - 240473 - | holo-(acyl-carrier-protein) synthase fliL 241374 - 240823 - | flagellar basal body-associated protein FliL Cla_0272 242078 - 241440 - | hypothetical protein TERM 256 242149 - 242114 - H 81 -7.2 -4.7254 | opp_overlap 242123, overlap 242116 ATTTTGTAGTAAAAA TATTTAAAATAAGAAT GTTT ATTCTTATTTTTAACA ATTTTAATACAAAAT TERM 257 242147 - 242116 - H 74 -7.6 -3.98256 | opp_overlap 242123, overlap 242114 TTTGTAGTAAAAATA TTTAAAATAAGAAT GTTT ATTCTTATTTTTAA CAATTTTAATACAAA TERM 258 242123 - 242140 + H 73 -5.7 -4.66264 | opp_overlap 242116 242114 TAAAAATATTTAAAA TAAGAAT GTTT ATTCTTA TTTTTAACAATTTTA katA 242321 - 243745 + | catalase TERM 259 244033 - 244055 + G 70 -6.3 -4.11773 | opp_overlap 244037 AAAAATGATAGAGGT CAAACTCCA CTAGC TGGAGTATG TTTTAAAGGGTATTT Cla_0274 243796 - 244284 + | conserved hypothetical protein, ankyrin repeat family protein TERM 260 245421 - 245411 - g 80 -6.8 -4.73682 | GCTGATAATACAAAA GCAG CGG CTGC AAAAGGTTTTTCAAA argH 244328 - 245728 + | argininosuccinate lyase TERM 261 245739 - 245723 - T 73 -2.3 -5.75822 | opp_overlap 245730 245735 245738, overlap 245738 GAGAAACTAAAAAAA GATTG AGTTTAA CAATC ATGATTATATCATGC Cla_0276 246435 - 245767 - | helix-turn-helix containing protein Cla_0277 246604 - 246966 + | endoribonuclease L-PSP, putative TERM 262 247034 - 247054 + G 74 -6.8 -4.26681 | opp_overlap 247034 247035, overlap 247035 TGCTCTATAAAAAAA TCAACGCC CATAT GGCGTTGC TTTTAAGTGGTTTAT TERM 263 247054 - 247034 - g 90 -6.8 -5.60993 | opp_overlap 247034 247035, overlap 247035 TGCTCTATAAAAAAA TCAACGCC CATAT GGCGTTGC TTTTAAGTGGTTTAT TERM 264 247035 - 247053 + G 81 -10.3 -3.14924 | opp_overlap 247034 247035, overlap 247034 GCTCTATAAAAAAAT CAACGCC CATAT GGCGTTG CTTTTAAGTGGTTTA TERM 265 247053 - 247035 - g 93 -10.3 -3.95873 | opp_overlap 247035 247034, overlap 247034 GCTCTATAAAAAAAT CAACGCC CATAT GGCGTTG CTTTTAAGTGGTTTA TERM 266 247069 - 247090 + G 75 -5.9 -4.72486 | CTTTTAAGTGGTTTA TTCTTGCTA GCTT TGGCAGGAA TTTTTGGACTTTCTC Cla_0278 246970 - 248409 + | anaerobic C4-dicarboxylate transporter, putative metC 248423 - 249592 + | cystathionase beta-lyase purB2 249596 - 250960 + | adenylosuccinate lyase TERM 267 252291 - 252277 - g 70 -5.8 -4.33739 | opp_overlap 252275 252277 CAAAAAACTTCAAAA TTTAGA AAA TCTAAA TGATTTTGATTTCTA Cla_0281 250967 - 252307 + | MmgE/PrpD family protein TERM 268 252307 - 252329 + F 93 -10.7 -4.20868 | opp_overlap 252311 TGATTTTGATTTCTA GCAATCTCA TTTTT TGAGATTGC TTATTATTTTAAAAA Cla_0282 252400 - 252627 + | ferrous iron transport protein A, putative TERM 269 253950 - 253972 + G 88 -9.2 -4.08349 | TTTGTTGGAGTGTTT TTTCCTGCTG ATG TAGCGGGAAA TTATCTTTTTGGGAT feoB 252627 - 254651 + | ferrous iron transport protein B TERM 270 254641 - 254677 + T 90 -6.8 -5.21709 | opp_overlap 254635 254640 254647, overlap 254647 TTAATATTACTAAAT TGATAATTTAATCATC TTTAT GATGATTAAATTTGCA TTTTTTGCTCTAAAG TERM 271 254647 - 254671 + T 84 -8.8 -4.06778 | opp_overlap 254635 254647 254640, overlap 254641 TTACTAAATTGATAA TTTAATCATC TTTAT GATGATTAAA TTTGCATTTTTTGCT TERM 272 254671 - 254647 - T 79 -8.8 -3.48807 | opp_overlap 254641 254647, overlap 254635 254640 TTACTAAATTGATAA TTTAATCATC TTTAT GATGATTAAA TTTGCATTTTTTGCT Cla_0284 255332 - 254667 - | conserved hypothetical protein, putative transcriptional regulator, TenA/Thi-4-like protein TERM 273 255233 - 255198 - G 78 -6.4 -4.71382 | opp_overlap 255198 ATAATTATTTAAAAA GATATAATCTTGTTTT AGAT AAAACAAAAATACATC TTTTTCCAAAGTACC acpP1 255478 - 255711 + | acyl carrier protein fabF 255739 - 256953 + | 3-oxoacyl-(acyl carrier protein) synthase II accA 256955 - 257890 + | acetyl-CoA carboxylase, carboxyltransferase, alpha subunit TERM 274 258266 - 258250 - f 76 -8.1 -3.69702 | CATCATTTAATATAA TGGTAAA AAT TTTACCA AATAAACTTTTTATA TERM 275 258339 - 258313 - f 70 -6.6 -4.09739 | opp_overlap 258318 TTAATTTTTCTAAAA CAAAAGGATTAG CAT CAAGTCCTTTTG CCTCAAGTCCTCTAT TERM 276 259176 - 259190 + G 100 -8.6 -5.55769 | TTTTACACGGTATTG GAGCTA ATT TAGCTC TTTTTTCTTATAAAC kpsM 258920 - 259696 + | capsular polysaccharide ABC transporter, permease protein kpsT 259693 - 260364 + | capsular polysaccharide ABC transporter, ATP-binding protein kpsE 260354 - 261469 + | capsular polysaccharide export inner-membrane protein KpsE TERM 277 262126 - 262138 + G 72 -4.1 -5.0925 | GATTTCTTACTTAAA GGTCA GCT TGATC TTTTTCCTTTTAGAA kpsD 261469 - 263127 + | capsular polysaccharide ABC transporter, periplasmic polysaccharide-binding protein TERM 278 263586 - 263571 - g 82 -5.4 -5.40474 | ATCGCGGTAAAAAAA GAAGCA TGTC CGCTTC AACTTGCTCCAACTT kpsF 263136 - 264092 + | arabinose-5-phosphate isomerase Cla_0295 264092 - 264481 + | glycerol-3-phosphate cytidylyltransferase, putative TERM 279 264654 - 264668 + G 93 -8.6 -4.89852 | opp_overlap 264639 264643 GATAGCGTATTACTA TCAAGC TGA GCTTGA TTTTTATCGCTGTGA TERM 280 265332 - 265355 + G 81 -8.4 -4.10657 | opp_overlap 265344 AAAGCATATTAATGG TGTAAAAATA GATG TATTTTTACA TTTTAAAGAATCTGA Cla_0296 264478 - 265674 + | hypothetical protein TERM 281 266672 - 266657 - gf 70 -6.2 -4.09739 | TCAAGTTTTTCAAAA TAAACC TTAT GGTTTA TCAGAAAGTGTTTTG TERM 282 268671 - 268661 - gf 72 -4 -5.1287 | opp_overlap 268661 GTTAGATTTAAAAAA GAAA GTT TTTC TTCTTGGCAGGATTT TERM 283 268681 - 268693 + GF 72 -6.3 -4.323 | TTTTTCTTCTTGGCA GGATT TCT AATCC TTTTCCATATTTGAA Cla_0297 265686 - 268982 + | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase, putative Cla_0298 268949 - 271555 + | capsular polysaccharide biosynthesis protein, putative TERM 284 271916 - 271906 - g 72 -2.6 -5.45802 | TTGTTAAAAGAAAAA TATA AGA TATA TAAAAACATTCAAGA Cla_0299 271555 - 273402 + | capsular polysaccharide biosynthesis protein, putative glycosyltransferase Cla_0300 273603 - 273848 + | capsular polysaccharide biosynthesis protein Cla_0301 273845 - 275383 + | capsular polysaccharide biosynthesis protein Cla_0302 275380 - 276111 + | capsular polysaccharide biosynthesis protein TERM 285 276662 - 276645 - g 75 -5.7 -4.72277 | AAGAATACAAAGAAA TATCTAA AAAA TTAGATA GCGGTGATAGATTGA Cla_0303 276092 - 276727 + | hypothetical protein Cla_0304 276720 - 277355 + | HAD-superfamily hydrolase TERM 286 277411 - 277426 + G 72 -6.2 -4.23104 | opp_overlap 277411 277409 TAGTGAAGATAAAGA TGGTTT TCCA AAACCA TTTATTGAAATTTGC Cla_0305 277352 - 278092 + | capsular polysaccharide biosynthesis protein, putative nucleotidyltransferase Cla_0306 278073 - 278408 + | hypothetical protein Cla_0307 278411 - 278743 + | hypothetical protein Cla_0308 278736 - 279473 + | capsular polysaccharide biosynthesis protein, putative nucleotidyltransferase TERM 287 280255 - 280240 - f 74 -4.8 -5.02323 | TGACTATAAACAAAA CAAAAA GTTA TTTTTG GATATGAAGGAATAT TERM 288 281681 - 281667 - g 79 -5.8 -5.09173 | opp_overlap 281667 CAAGATTGTAAAAAA TCATAT TAC ATATGA TGATCTTCATAAATT TERM 289 281840 - 281820 - g 75 -4 -5.27335 | opp_overlap 281824 281825, overlap 281814 281836 TTCGCTAAATAAAAA CATCCCCT TTTTT AAAGGATG TTTTGAGAAATATCC TERM 290 282342 - 282323 - g 78 -3 -5.5112 | TCTATCAAGAAAAAA TAAAAAAA GATC TTTCTTTA AAACTACCTCCATTA TERM 291 282380 - 282366 - g 71 -8.6 -2.81872 | opp_overlap 282364 TCCATTAGAAGATTA TCCTGA TTA TCAGGA AGCTTTAAAAGAAAA Cla_0310 280582 - 282483 + | putative sugar transferase) TERM 292 282887 - 282877 - f 71 -2.6 -5.45802 | TTGTTAAAAGAAAAA TATA AGA TATA TAAAAACATTCAAGA TERM 293 284731 - 284716 - g 72 -6.2 -4.32177 | opp_overlap 284715 284723 GTAGCGGAGAAGAAA CTACTA TGCC TAGTAG CTATGCTGATTGGGT Cla_0312 284430 - 284858 + | hypothetical protein TERM 294 285240 - 285202 - f 86 -4.6 -5.66684 | overlap 285203 TAAGGCATAAAAAAA TCCTTTAGCTTTTTTAGC TTT GCTATTAAAGTTAAAGGG AAATAATGAAAAAAA TERM 295 285239 - 285203 - f 79 -8.1 -3.98383 | overlap 285202 AAGGCATAAAAAAAT CCTTTAGCTTTTTTAGC TTT GCTATTAAAGTTAAAGG GAAATAATGAAAAAA Cla_0313 285246 - 286019 + | putative methyltransferase TERM 296 286230 - 286262 + G 93 -11.6 -3.70149 | gap 1, opp_overlap 286238, overlap 286237 TAGCAGCGAAGATAG CTTAAAAAG-CTCCA ACGC TGGAGCCTTTTTAAG TTTAGCTAATATAGA TERM 297 286237 - 286254 + G 75 -5.5 -4.81851 | opp_overlap 286238, overlap 286230 GAAGATAGCTTAAAA AGCTCCA ACGC TGGAGCC TTTTTAAGTTTAGCT TERM 298 286253 - 286238 - g 89 -9 -4.6644 | opp_overlap 286237 286230 AAGATAGCTTAAAAA GCTCCA ACGC TGGAGC CTTTTTAAGTTTAGC Cla_0314 286033 - 288357 + | hypothetical protein TERM 299 288699 - 288715 + G 75 -9.5 -3.04144 | TTTAATTCTACTATT TGTCCTT GTA AAGGACA TGTTGGAAATCACGA Cla_0315 288354 - 288953 + | conserved hypothetical protein, putative glutamine amidotransferase Cla_0316 288950 - 289711 + | putative sugar nucleotidyltransferase TERM 300 289940 - 289954 + G 73 -8.6 -3.16328 | opp_overlap 289939 289942, overlap 289935 289932 289932 ATCAGGGTATGATAG TAGTCG TGA CGACTA TATCTATGTTTGATG cysC 289708 - 290214 + | adenylylsulfate kinase kpsC 290211 - 292238 + | capsular polysaccharide export protein KpsC kpsS 292235 - 293413 + | capsular polysaccharide export protein KpsS Cla_0320 294918 - 293410 - | putative glycosyltransferase TERM 301 293661 - 293644 - G 74 -8.5 -3.59979 | opp_overlap 293639 TTTTCTTAGTTCAAA GGGTATT TTAA AATACCC TAGATAACTTTTGCT TERM 302 293763 - 293779 + g 83 -6.7 -5.07107 | TATTGTTTTGGTGGA TGAATAT TTC ATATTCA TTTTTTAAGCCTTTG TERM 303 295765 - 295739 - g 70 -3.6 -5.04325 | TGCAAATGATAAAAA CTATGAGCTCAT CTT AAGCGCGCATAG CGTAGGAACGGTGCT Cla_0321 295083 - 296213 + | hypothetical protein Cla_0322 296222 - 297595 + | cytochrome P450 family protein TERM 304 297937 - 297912 - g 100 -11.3 -4.55697 | gap 1, opp_overlap 297910, overlap 297908 AGTTTTAGAAAGAAA GCTTACCGAGCA AAC TG-TCGGTAAGC AGCTTTAATTTTCTC Cla_0323 297592 - 297945 + | hypothetical protein nusA 299033 - 297942 - | transcription elongation factor NusA Cla_0325 299070 - 299399 + | hypothetical protein miaB 299396 - 300694 + | tRNA-i(6)A37 thiotransferase TERM 305 300808 - 300832 + G 81 -8.5 -4.24948 | GTGTGATACTTTTTT GGCATGGGCGT CTT GCTCTCATGCC TTTTGCCTATCGTAA Cla_0327 300678 - 301301 + | conserved hypothetical protein (DUF374 domain protein) Cla_0328 301307 - 302272 + | hypothetical protein Cla_0329 302269 - 302823 + | hypothetical protein TERM 306 302877 - 302891 + G 78 -6.4 -4.83677 | overlap 302879 ATTCTTTTTCATTTG TTGCAC TTT GTGCGA TTTTGATTTTATTTT TERM 307 303319 - 303290 - g 86 -7.3 -5.11112 | opp_overlap 303290 AAATCCGAAGAAAAA CACATTAATCTTA AATT TAAGATCAAAGTG TTTTATGCACAAGCT Cla_0330 302807 - 303346 + | hypothetical protein Cla_0331 304130 - 303333 - | conserved hypothetical lipoprotein lgt 304203 - 305018 + | prolipoprotein diacylglyceryl transferase TERM 308 305446 - 305460 + GF 75 -7.2 -4.11585 | opp_overlap 305446 305445 ACACTTAAAATATAT GAATCA TGG TGATTC TTCTTTATGGTGGGT frdC 305096 - 305875 + | fumarate reductase, cytochrome b subunit frdA 305844 - 307850 + | fumarate reductase, flavoprotein subunit frdB 307843 - 308568 + | fumarate reductase, iron-sulfur subunit Cla_0336 308546 - 310771 + | conserved hypothetical protein, predicted ATP/GTP-binding protein TERM 309 311638 - 311654 + G 74 -8.1 -3.57462 | opp_overlap 311651 TATGCGAACTTTTGT CAAATCA ATA TGATTTG TTTCAAAATGCACTA TERM 310 311899 - 311883 - g 72 -5.1 -4.73388 | opp_overlap 311883, overlap 311885 AATCTTTATGAAAAA GTTGCTT ATA AAGCACC GTATCTTTCAAGTGA TERM 311 312047 - 312057 + G 70 -5.4 -4.60041 | opp_overlap 312045 312047, overlap 312056 TACTCATTTAGAAGA GCAA ATT TTGC TTTTTAAGGCTCAAT Cla_0337 310761 - 312578 + | conserved hypothetical protein, predicted ATP/GTP-binding protein pnuC 313240 - 312581 - | nicotinamide mononucleotide transporter Cla_0339 313777 - 313271 - | conserved hypothetical protein, pyridoxamine 5'-phosphate oxidase family Cla_0340 314362 - 313781 - | putative modulator of drug activity MdaB TERM 312 314223 - 314238 + g 80 -6.2 -4.89519 | opp_overlap 314223 TTTTCCACATCATAA CCATTA TCTA TAATGG TTTCTTTTATATTAT Cla_0341 314462 - 314791 + | transcriptional regulator, MarR family TERM 313 315173 - 315203 + G 81 -8.4 -4.11216 | opp_overlap 315174, overlap 315174 TAAAAGAGCAAATAA ACTCTTTGCTTG AAATAGC CAAGCAAAGAGG TTTTGACACTAGCGA TERM 314 315202 - 315174 - g 100 -12.6 -4.60648 | opp_overlap 315173 315174 AAAAGAGCAAATAAA CTCTTTGCTTGA AATAG CCAAGCAAAGAG GTTTTGACACTAGCG TERM 315 315174 - 315202 + G 93 -11.9 -3.06515 | opp_overlap 315174, overlap 315173 AAAAGAGCAAATAAA CTCTTTGCTTG AAATAGC CAAGCAAAGAG GTTTTGACACTAGCG Cla_0342 314788 - 315240 + | putative Blc-like protein Cla_0343 316319 - 315237 - | NADP-dependent alcohol dehydrogenase TERM 316 315384 - 315370 - G 75 -4.3 -5.27335 | opp_overlap 315370 TGCTCTAAAGAAAAA TCAAG CATTT CTTGA GTTTCTTTAATACCC hsdR 316474 - 318786 + | type I restriction-modification system, R subunit rloE 318797 - 319399 + | hypothetical protein rloG 319405 - 320193 + | hypothetical protein hsdS 320190 - 321362 + | type I restriction-modification system, S subunit TERM 317 321390 - 321364 - f 79 -8.3 -3.78087 | opp_overlap 321382 321383, overlap 321383 AAGGAAAATTGTAAA TGTTAAAATTT TTATC AAATTTTAACA TATGGACTAGATATG TERM 318 321402 - 321432 + F 72 -4.3 -5.02074 | opp_overlap 321383 321402 321404, overlap 321383 321382 AACATATGGACTAGA TATGTTAAAAA TTTTTGATT TTTTTAACATA TTTTTTGAAGGATAA TERM 319 321683 - 321653 - g 80 -6.9 -4.84359 | opp_overlap 321661 TGAGCTTGATAAAAA TTTAACTTCCGAG GAAAT CTCGGTAGTTCAA AAAGAGGGCAAAAGA mloC 321450 - 322478 + | hypothetical protein TERM 320 323362 - 323347 - T 79 -9 -3.61328 | AGTAATACTTGCAAA TCCACC TTTT GGTGGA AAAGAAAAAGAGCAA TERM 321 323951 - 323924 - T 70 -6.4 -4.1441 | opp_overlap 323924 CAAAAAAAAGCCAAA GAGCTTTTAGAA AAAA TTCAAAAAACTC TTATTTAAGGCATCA moeA1 325134 - 323956 - | molybdopterin biosynthesis protein moaE 325576 - 325136 - | molybdopterin converting factor, subunit 2 moaD 325801 - 325580 - | molybdopterin converting factor, subunit 1 Cla_0353 327357 - 325813 - | multicopper oxidase family protein nspC 327484 - 328647 + | carboxynorspermidine decarboxylase fdhC 328784 - 329713 + | formate dehydrogenase, cytochrome b subunit Cla_0356 329777 - 330457 + | hypothetical protein TERM 322 330493 - 330461 - f 90 -7.4 -5.05228 | gap 1, opp_overlap 330465, overlap 330465 AGTAAATTATAAAAA TAAATATGTATTTTG TTAC CAAAATACATA-TTA TCAAAATCATCTTTT TERM 323 330490 - 330465 - f 100 -10.7 -5.00267 | opp_overlap 330465, overlap 330461 AATTATAAAAATAAA TATGTATTTTG TTAC CAAAATACATA TTATCAAAATCATCT TERM 324 330465 - 330490 + F 86 -10.7 -3.3197 | opp_overlap 330465 330461 AATTATAAAAATAAA TATGTATTTTG TTAC CAAAATACATA TTATCAAAATCATCT Cla_0357 330634 - 330837 + | hypothetical protein TERM 325 331746 - 331736 - g 83 -6.8 -5.09762 | GTTGAAGAAATAAAA GCAG AGG CTGC TAAATGGACTCCTGA fdhA 330854 - 333676 + | formate dehydrogenase, alpha subunit (selenocysteine-containing) fdhB 333688 - 334257 + | formate dehydrogenase, beta (iron-sulfur) subunit TERM 326 334290 - 334255 - f 73 -7 -4.1899 | opp_overlap 334264, overlap 334258 334264 GGACTTGATGCAAAA TAATTCAAAGGGTGTT TACA AACACCCTTTTTACTA CTTATAATCCAAGGT TERM 327 334287 - 334258 - f 72 -6.5 -4.21812 | opp_overlap 334264, overlap 334255 334264 CTTGATGCAAAATAA TTCAAAGGGTGTT TACA AACACCCTTTTTA CTACTTATAATCCAA TERM 328 334264 - 334281 + F 100 -9.9 -4.8269 | opp_overlap 334258 334255 334264 GCAAAATAATTCAAA GGGTGTT TACA AACACCC TTTTTACTACTTATA TERM 329 334281 - 334264 - f 88 -9.9 -3.92716 | opp_overlap 334264, overlap 334258 334255 GCAAAATAATTCAAA GGGTGTT TACA AACACCC TTTTTACTACTTATA TERM 330 334541 - 334531 - g 72 -4 -5.06089 | AAATTAGAAACAAAA TTAG ATT CTAA GCGTCGCATAACATG Cla_0360 334312 - 335040 + | putative transcriptional regulator, ModE family TERM 331 335197 - 335168 - g 77 -4.5 -5.19998 | opp_overlap 335174, overlap 335192 AGAACTAAAAGAAAA TGAAAATTTAGAA ATTC TTTTAAATTCTCA AGCTTCTAAAGAAAA Cla_0361 335088 - 335666 + | putative transcriptional regulator selD 335732 - 336694 + | selenide, water dikinase (possible start at 335663) putA 336835 - 340332 + | proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase TERM 332 340375 - 340393 + G 70 -8.2 -3.06737 | opp_overlap 340374 340375 AATTAATACTCAAAT TGCGATAA TGT TTGTCGCA TATTCAGCGTTAATG TERM 333 340490 - 340512 + G 83 -10.6 -3.47573 | TCTATGGGGCCTGTA GTTTCAGCAC TTA GTGCTGGAGC TTCTGATATGAGTGG putP 340346 - 341827 + | sodium/proline symporter TERM 334 341856 - 341832 - T 79 -10.1 -2.88427 | opp_overlap 341839, overlap 341839 AACATCTTTGATATA TTCAAAAGCCT TTA AGGCTTTTGGA TTAAAAATCTAAGCG TERM 335 341839 - 341849 + T 74 -6.8 -4.27584 | opp_overlap 341832 341839 TTGATATATTCAAAA GCCT TTA AGGC TTTTGGATTAAAAAT TERM 336 341849 - 341839 - T 74 -6.8 -4.26188 | opp_overlap 341839, overlap 341832 TTGATATATTCAAAA GCCT TTA AGGC TTTTGGATTAAAAAT Cla_0365 342070 - 341843 - | conserved hypothetical protein, SirA family Cla_0366 343281 - 342067 - | putative integral membrane protein (DUF395 domain protein) TERM 337 342592 - 342613 + g 72 -4.5 -4.93696 | overlap 342596 GCCAAATATCAATGC TAAAGGAAG AATA CTTTCTTTG TTTTTAATATTTAAA purA 343567 - 344817 + | adenylosuccinate synthetase TERM 338 345018 - 345003 - g 70 -6.2 -4.08394 | AGATCGTCTTTAAAA TTGCAA GAAA TTGCAA GAGAAGGTAAGCAAA Cla_0369 344814 - 345233 + | hypothetical protein TERM 339 345256 - 345243 - g 76 -2.5 -5.5943 | opp_overlap 345234 345243 AAATGATGAAAAAAA TAATA TTTT TATTA ATTTTTTTAAATTTT Cla_0370 345233 - 345748 + | hypothetical protein Cla_0371 345810 - 346361 + | conserved hypothetical protein (DUF507 domain protein) TERM 340 347029 - 347055 + G 72 -8.9 -2.91239 | overlap 347033 GGCAAAAGATTTGAT TGAATTATACC AAAAA GGTGTAATTCA TGGTGTATTTTTATC pyrAa 346358 - 347476 + | carbamoylphosphate synthase, small subunit Cla_0373 347473 - 348135 + | hypothetical protein TERM 341 349055 - 349071 + G 73 -8.7 -3.09288 | overlap 349054 349058 TTGTATATTTATGGG CAGGTGG ACA CCACTTG ATTTATTCAACAGTG ccoN 348259 - 349725 + | cytochrome c oxidase, cbb3-type, subunit I TERM 342 350190 - 350179 - g 70 -5.8 -4.28488 | ACGCAAACATAGAAA CAGC ATAT GCTG AAGCACTAACTGTAA ccoO 349737 - 350402 + | cytochrome c oxidase, cbb3-type, subunit II ccoQ 350411 - 350614 + | cytochrome c oxidase, cbb3-type, subunit IV ccoP 350614 - 351492 + | cytochrome c oxidase, cbb3-type, subunit III Cla_0378 351492 - 351704 + | hypothetical protein TERM 343 351822 - 351841 + F 100 -7.8 -5.186 | opp_overlap 351823, overlap 351823 GAAAAATTTATTCAA AGGCGGTT TTTT AACCGCCA TTTTTATGTGTTTTG TERM 344 351823 - 351840 + F 91 -11.3 -3.6872 | opp_overlap 351823, overlap 351822 AAAAATTTATTCAAA GGCGGTT TTTT AACCGCC ATTTTTATGTGTTTT TERM 345 351840 - 351823 - f 91 -11.3 -3.7175 | opp_overlap 351823 351822 AAAAATTTATTCAAA GGCGGTT TTTT AACCGCC ATTTTTATGTGTTTT TERM 346 351964 - 351953 - g 88 -4.4 -5.77856 | AAGAAATTAAAAAAA CAAC AGGT GTTG ATATCGCTCTTGCGC Cla_0379 351847 - 352392 + | hypothetical protein Cla_0380 352382 - 352894 + | hypothetical protein TERM 347 353110 - 353098 - g 72 -4.9 -4.98758 | AAAAATTTAGAAAAA GAATT AAA AATTC CAAGTAATTTTTTTG Cla_0381 352894 - 355278 + | hypothetical protein TERM 348 356831 - 356809 - g 84 -9.2 -3.71645 | opp_overlap 356804 356808 356797 356809 AAGCTTATACGCAAA GCAATGTAGC TTT GCTAGATTGC ATTAGTGTAAGGGTG TERM 349 356809 - 356831 + G 73 -9.2 -2.55668 | opp_overlap 356809, overlap 356804 356808 356797 AAGCTTATACGCAAA GCAATGTAGC TTT GCTAGATTGC ATTAGTGTAAGGGTG TERM 350 357336 - 357324 - g 71 -3.4 -5.28983 | GCCAAAAGAGAAAAA CTTC AAGCA GAAG ATGAGATAAATTGTT Cla_0382 355275 - 358022 + | ATP-dependent DNA helicase, UvrD/REP family TERM 351 358403 - 358391 - f 73 -3.5 -5.34857 | TTAAAGAAAACAAAA TAAAA TCT TTTTA ATATGATAAAAATCA TERM 352 358684 - 358657 - f 100 -8.8 -4.94222 | opp_overlap 358644 358648 358657 358656, overlap 358644 358648 AATAATTTATAAAAA TTATAATATATT TTTA AATATATTATAA ATTGATAATTTTTTT TERM 353 358657 - 358684 + F 72 -8.8 -2.66735 | opp_overlap 358644 358648 358657, overlap 358644 358648 358656 AATAATTTATAAAAA TTATAATATATT TTTA AATATATTATAA ATTGATAATTTTTTT Cla_0383 358772 - 360742 + | MCP-domain signal transduction protein TERM 354 360766 - 360797 + F 77 -9.6 -3.03605 | opp_overlap 360765 ATTTATAAAATTTAC CCATCTTTCTTTGA TACT TAGAAGAAAGATGG TCTCATTCTTGATAT rplM 360901 - 361329 + | 50S ribosomal protein L13 rpsI 361332 - 361721 + | 30S ribosomal protein S9 TERM 355 361729 - 361748 + F 100 -10.8 -5.74086 | AACGTTAATCTTTTT TGGATCCA TTTT TGGATCCA TTTTTTCTTTCATTT TERM 356 361885 - 361910 + F 100 -12 -5.17488 | opp_overlap 361883 361888 TTTTTGTAGTAAATT TAAGCCCCTT ACCCAA AAGGGGCTTA TTTTATTTTAATCTT TERM 357 361907 - 361888 - f 77 -9.3 -3.30701 | opp_overlap 361885, overlap 361883 TTGTAGTAAATTTAA GCCCCTT ACCCAA AAGGGGC TTATTTTATTTTAAT cadF 361968 - 362954 + | outer membrane fibronectin-binding protein TERM 358 362990 - 363018 + G 72 -6.2 -4.22346 | gap 2, overlap 363016 TTTATTTGACTTAGA TGGCACTTTGATAG ATT CTA-CAA-GTGCCA TTTTAGATGGATTTG Cla_0387 362958 - 363602 + | conserved hypothetical protein, putative HAD superfamily hydrolase TERM 359 365299 - 365287 - g 77 -4.9 -5.28561 | AAGAGACAATAAAAA GAATT CCA AATTC AGTAAAAAGGGTTTT TERM 360 366515 - 366497 - g 80 -9 -3.75911 | opp_overlap 366492, overlap 366492 366488 366495 TGCAAATAAAGAAGA TTCTAAAG CTT CTTTAGAA CTAAGAGATAAGTTG Cla_0388 363720 - 367274 + | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 361 367305 - 367337 + GF 100 -20.1 -4.66163 | TTACTTGTGAGTTTA TGGATACTTAGCGCT TTT GGCGCTAAGTATCCA TTTTTGAATCAAAGT Cla_0389 367278 - 367601 + | hypothetical protein TERM 362 368788 - 368772 - gf 71 -4.5 -4.77438 | ATTGATTAGCAAAAA TACGATT AGT AATCATA ATGAAGTAAGTGCTT ctsD 367573 - 368964 + | putative type II protein secretion system D protein CtsD ctsX 368945 - 369274 + | putative Campylobacter transformation system protein CtsX ctsE 369267 - 370781 + | putative type II protein secretion system E protein CtsE TERM 363 371523 - 371536 + G 76 -2.5 -5.55001 | opp_overlap 371515 371523, overlap 371520 371527 TTGGAAAGATAATAT TTTAT CAAG ATAAA TTTTGTTTTTTCTTG TERM 364 371527 - 371552 + G 71 -3.4 -5.32699 | opp_overlap 371515 371523, overlap 371520 371523 AAAGATAATATTTTA TCAAGATAAA TTTTGT TTTTTCTTGA TTTTTTCATATTTAC ctsF 370973 - 371938 + | putative type II protein secretion system F protein CtsF Cla_0394 372687 - 371935 - | conserved hypothetical integral membrane protein (DUF81 domain protein) Cla_0395 373421 - 372672 - | hypothetical protein TERM 365 372804 - 372824 + g 74 -6.9 -4.27192 | opp_overlap 372787 372804 372803 372799 372796 TTTAAAATCATAAAT CTTACGCTT TAA AAGCTTAAG TTTTAATGAAACTTT flgK 375250 - 373421 - | flagellar hook-associated protein FlgK Cla_0397 375695 - 375261 - | hypothetical protein TERM 366 375428 - 375446 + g 81 -4.6 -5.40464 | overlap 375429 GTAAGGTGTTTAAAT TTTGCTTT AAA AGAGCAAG TTTTTCTTTATCCTC TERM 367 375738 - 375695 - R 82 -10.6 -2.72227 | opp_overlap 375696 AATATTGTTTAACCA TTTTTTATCCTTTCTTAGGC GCCA ACCCAAAAAAGGATAAAAAT TATAATAAAGAATCT TERM 368 375696 - 375737 + r 77 -9 -3.4072 | opp_overlap 375695 ATATTGTTTAACCAT TTTTTATCCTTTCTTAGG CGCCAA CCCAAAAAAGGATAAAAA TTATAATAAAGAATC Cla_0398 375944 - 375738 - | hypothetical protein Cla_0399 376370 - 376005 - | hypothetical protein flgI 377416 - 376370 - | flagellar P-ring protein FlgI TERM 369 377136 - 377155 + g 84 -8.6 -4.3467 | opp_overlap 377149 TCAAGTTTATCCCCA CTTCTTGC AAAA GCAGGAAG TTTTGCTGTAACCAT Cla_0401 378130 - 377474 - | conserved hypothetical protein, putative methylase TERM 370 377598 - 377630 + g 72 -8.7 -3.00418 | opp_overlap 377601 377604, overlap 377597 ATGGTGATTTTTACA TTAGAATTTGGTAAA TTT TTTATCAAATTCAAA GTTCTTTCATAAATA Cla_0402 378518 - 378123 - | hypothetical protein Cla_0403 379206 - 378502 - | hypothetical protein Cla_0404 379855 - 379217 - | hypothetical protein TERM 371 380163 - 380175 + G 71 -5.5 -4.41616 | GCTACACCAAAGTAC GCTCT TTT AGGGC TTTCTTTGCCAAAAT thiL 379953 - 380774 + | thiamine monophosphate kinase TERM 372 381073 - 381060 - g 73 -3.9 -5.20154 | AGAGAATTTAAAAAA TTTCA AGCA TGAAA AAATGAAAATTTTAG TERM 373 381520 - 381539 + G 82 -5 -5.36441 | GGTGAAGTTTTAGGG CATTATCC TTTT GGAAAATG TTTTTTGTGTGAAGA truD 380752 - 381879 + | tRNA pseudouridine synthase D Cla_0407 381967 - 382284 + | hypothetical protein TERM 374 382759 - 382770 + G 75 -5.8 -4.77173 | opp_overlap 382758 382759 CATTAATGAAAAAAT GGCA GTCA TGCC TTTATTTTGTAAAGA Cla_0408 382286 - 382978 + | hypothetical protein fldA 382979 - 383470 + | flavodoxin TERM 375 383493 - 383477 - T 89 -9.5 -4.30719 | opp_overlap 383477 TTTTCTTAGAATAAA GATGTCT TAA AGACATC TTTGAAACTCTAATT TERM 376 383477 - 383493 + T 82 -9.5 -3.60006 | opp_overlap 383477 TTTTCTTAGAATAAA GATGTCT TAA AGACATC TTTGAAACTCTAATT Cla_0410 383896 - 383483 - | hypothetical protein Cla_0411 384599 - 383889 - | conserved hypothetical integral membrane protein (DUF540 domain protein) TERM 377 383996 - 383977 - G 70 -4.3 -4.86385 | overlap 383978 ACTTGTAAAAATAAA CCAAGCA AAGGTA TGCTTGA TAAAGTAAAAAAGAC TERM 378 384496 - 384477 - G 86 -3 -5.94214 | AATATAAGAAAAAAA TATATCAT AACT ATAATATA CTAGCAGGGCAAAAA Cla_0412 385309 - 384596 - | deoxyuridine triphosphatase domain protein Cla_0413 385847 - 385302 - | conserved hypothetical protein, probable ATP/GTP-binding protein TERM 379 385776 - 385798 + g 70 -5.6 -4.3586 | opp_overlap 385777, overlap 385777 ATCATACATAGAAAA AGAAAGATGG TTG CCATTTTTCG TTTTAATATCCATAG TERM 380 385777 - 385797 + g 76 -9.1 -3.21034 | opp_overlap 385777, overlap 385776 TCATACATAGAAAAA GAAAGATGG TTG CCATTTTTC GTTTTAATATCCATA TERM 381 385797 - 385777 - G 83 -6.9 -5.07275 | opp_overlap 385777 385776 TCATACATAGAAAAA GAAAGATGG TTG CCATTTTTC GTTTTAATATCCATA TERM 382 385933 - 385908 - R 84 -9.2 -4.19371 | opp_overlap 385908, overlap 385893 CAAATCTTGAATAAA TTTGCAAAGT TTTCGT ACTTTGCAAA TTTCAAATATTTAGG TERM 383 385908 - 385933 + r 81 -9.2 -3.695 | opp_overlap 385893 385908 CAAATCTTGAATAAA TTTGCAAAGT TTTCGT ACTTTGCAAA TTTCAAATATTTAGG hydA 387609 - 385975 - | quinone-reactive Ni/Fe-hydrogenase, small subunit tpiA 388294 - 387614 - | triosephosphate isomerase TERM 384 388186 - 388208 + g 71 -7.8 -3.45404 | opp_overlap 388192, overlap 388187 388190 AAGCTATGCTTGGTG GGAAGATGAA AAT TTCATCTTCA TTGCTTAAGTTTTGG TERM 385 388187 - 388207 + g 85 -11.3 -2.6652 | opp_overlap 388192, overlap 388186 388190 AGCTATGCTTGGTGG GAAGATGAA AAT TTCATCTTC ATTGCTTAAGTTTTG pgk 389493 - 388291 - | phosphoglycerate kinase gapA 390490 - 389495 - | glyceraldehyde-3-phosphate dehydrogenase Cla_0418 390550 - 391095 + | nicotinate (nicotinamide) nucleotide adenylyltransferase Cla_0419 391109 - 391438 + | conserved hypothetical protein (DUF143 domain protein) Cla_0420 391448 - 393823 + | TPR-domain containing protein Cla_0421 394199 - 393825 - | conserved hypothetical lipoprotein (DUF1090 domain protein) TERM 386 393991 - 394001 + g 75 -4 -5.31275 | TGCTCTTTAAGTTTT TTAG CCT CTAA TTTTTTATCATAAAA TERM 387 394100 - 394111 + g 70 -4.4 -4.92828 | GATGATTGTAATTTT TAGC ATAA GCTA TTTCTTTTTGAATTT Cla_0422 395828 - 394263 - | hypothetical protein Cla_0423 396195 - 395821 - | HIT family hydrolase TERM 388 395956 - 395939 - G 76 -2.7 -5.53991 | CATTCAGGAAAAAAA GCATCTT CTTT AAAACGC GCCATAACATGAAAA TERM 389 396204 - 396241 + r 73 -3.5 -5.42862 | opp_overlap 396213, overlap 396207 396208 396213 AAATCATGCTAACTC TCAAGAAAAGACTAGGG TTAT TCCTAGTCTTTTGATTA TTTTTTTGGCCCTAT TERM 390 396207 - 396238 + r 74 -5.2 -4.79949 | opp_overlap 396213, overlap 396204 396208 396213 TCATGCTAACTCTCA AGAAAAGACTAGGG TTAT TCCTAGTCTTTTGA TTATTTTTTTGGCCC TERM 391 396208 - 396237 + r 75 -8.7 -3.46885 | opp_overlap 396213, overlap 396207 396204 396213 CATGCTAACTCTCAA GAAAAGACTAGGG TTAT TCCTAGTCTTTTG ATTATTTTTTTGGCC TERM 392 396213 - 396232 + r 90 -8.6 -4.72772 | opp_overlap 396213, overlap 396208 396207 396204 TAACTCTCAAGAAAA GACTAGGG TTAT TCCTAGTC TTTTGATTATTTTTT TERM 393 396232 - 396213 - R 86 -7.9 -4.65747 | opp_overlap 396208 396207 396204 396213 TAACTCTCAAGAAAA GACTAGG GTTATT CCTAGTC TTTTGATTATTTTTT TERM 394 396261 - 396277 + r 74 -8.1 -3.55548 | TTTGGCCCTATCATT TTTGTAG GAT CTACAAA TTTAGCAAAGTCTTC fumC 397630 - 396239 - | fumarate hydratase, class II TERM 395 397751 - 397729 - R 100 -12.2 -5.03747 | AAATTTTTTAAAAAA GTGTAGTTTT TTC AAAACTACAC AAAATATTTATTCTA glmS 399558 - 397759 - | glucosamine fructose-6-phosphate aminotransferase TERM 396 398354 - 398337 - G 77 -9.9 -2.9661 | overlap 398336 CAAGCATCCATAAAG TTGCCAC TTGA GTGGCAA AAGCTTTAGTTGAAG Cla_0426 401955 - 399562 - | nucleotidyltransferase, GlnD family TERM 397 400134 - 400115 - G 72 -6.6 -4.08945 | opp_overlap 400109 ATGATTTTTTCAAAA CTATTTTT TATA AAAAATAG ATTGGATTTAATATG Cla_0427 402032 - 403096 + | radical SAM domain protein TERM 398 404371 - 404381 + G 70 -4 -5.00851 | TTAAACTTTGGCATA CTTA CTT TAAG TTTTATTTCATTACT Cla_0428 403105 - 404427 + | xanthine/uracil permease family protein Cla_0429 404429 - 404869 + | nucleotide phosphoribosyltransferase, putative bisC 404931 - 407330 + | biotin sulfoxide reductase TERM 399 407463 - 407477 + G 74 -8.6 -3.28712 | opp_overlap 407462 407454 407463 GACAAATTTATGAAG GCTCTA AAG TAGAGC TTATAAAAGAAGAGG TERM 400 407477 - 407463 - g 70 -8.6 -2.55446 | opp_overlap 407463, overlap 407462 407454 GACAAATTTATGAAG GCTCTA AAG TAGAGC TTATAAAAGAAGAGG Cla_0431 407333 - 407866 + | hypothetical protein Cla_0432 407873 - 409030 + | hypothetical protein Cla_0433 409027 - 409767 + | hypothetical protein TERM 401 409865 - 409905 + F 91 -10.2 -4.22524 | gap 1, opp_overlap 409876 409904, overlap 409863 409868 TCATAGATAACTCCT TAGTTTTTAAAGATCTAGT TTTT ACTAGATCTTTAAAGA-TA TTTAGTTTTAAATAT TERM 402 409868 - 409903 + F 100 -14.4 -3.70102 | opp_overlap 409876, overlap 409865 409863 TAGATAACTCCTTAG TTTTTAAAGATCTAGT TTTT ACTAGATCTTTAAAGA TATTTAGTTTTAAAT TERM 403 409895 - 409876 - f 82 -9.4 -3.55444 | opp_overlap 409868 409865 409863 TCCTTAGTTTTTAAA GATCTAGT TTTT ACTAGATC TTTAAAGATATTTAG TERM 404 410193 - 410231 + G 100 -15.4 -3.75153 | overlap 410190 AACTTAGTTTAGTAG CAGCGTTAGCTGCAGG TGCTTTT TCAGCAGCTAACGCTG TTTCACTTGAAGAAG TERM 405 410529 - 410519 - g 76 -5.4 -5.11937 | AATAACTTGAAAAAA TCTG GAA CAGA TACTCACTCAACTTT porA1 410165 - 411442 + | major outer membrane protein TERM 406 411451 - 411470 + T 91 -12.2 -3.35197 | opp_overlap 411451 ATTCTAATTATAAAA GCTAAGCC AAAA GGCTTAGC TTACTATATCTAAAA TERM 407 411470 - 411451 - T 100 -12.2 -4.54821 | opp_overlap 411451 ATTCTAATTATAAAA GCTAAGCC AAAA GGCTTAGC TTACTATATCTAAAA Cla_0435 412206 - 411466 - | conserved hypothetical protein (DUF328 domain protein) TERM 408 412340 - 412324 - H 70 -8.7 -2.62616 | opp_overlap 412315 412336 412339 TCAGTTGGTAGAGCA GCTGCCT TGT AAGCAGC AGGTCGGGGGTTCAA TERM 409 412738 - 412722 - H 82 -10.9 -2.65815 | opp_overlap 412713 CTCAGAGGTAGAGCA CTCCCTT GGT AAGGGAG AGGTCGCGGGTTCAA tuf 412837 - 414036 + | translation elongation factor Tu TERM 410 414065 - 414037 - f 75 -7.5 -4.07437 | opp_overlap 414043, overlap 414043 AAAATTATTAAATAA TTATAAGCGAGAT TTG ATCTCGCTTTTTA AGGAATAAAAATGAG TERM 411 414059 - 414043 - f 89 -10.9 -3.65738 | opp_overlap 414043, overlap 414037 ATTAAATAATTATAA GCGAGAT TTG ATCTCGC TTTTTAAGGAATAAA TERM 412 414043 - 414059 + F 100 -10.9 -4.58395 | opp_overlap 414037 414043 ATTAAATAATTATAA GCGAGAT TTG ATCTCGC TTTTTAAGGAATAAA rpmG 414076 - 414234 + | 50S ribosomal protein L33 TERM 413 414252 - 414235 - f 77 -8.5 -3.49728 | overlap 414231 414250 414251 AAATTAAAAAGTTAA GGCTTTT ATAA AAAAGCC CTTAGGGCAATAGCT TERM 414 414260 - 414250 - f 100 -8.2 -5.24129 | overlap 414235 414231 414251 GGCTTTTATAAAAAA GCCC TTA GGGC AATAGCTCCAACGGT secE 414348 - 414530 + | preprotein translocase, SecE subunit nusG 414535 - 415065 + | transcription antitermination protein NusG rplK 415089 - 415514 + | 50S ribosomal protein L11 rplA 415578 - 416279 + | 50S ribosomal protein L1 TERM 415 416306 - 416282 - f 100 -10.2 -5.23292 | opp_overlap 416286 TGATACAAAATAAAA TTAATGAGAG TTTTT CTCTCATTAA TAAAAATTAGATAAG TERM 416 416344 - 416313 - f 77 -4.7 -5.1356 | opp_overlap 416313 TCTCATTAATAAAAA TTAGATAAGATAA TATCTT TTATTTTATCTAA TTTTTATCTTAGATT TERM 417 416313 - 416344 + F 90 -6.9 -5.1167 | opp_overlap 416313 TCTCATTAATAAAAA TTAGATAAGATAA TATCTT TTATTTTATCTAA TTTTTATCTTAGATT rplJ 416434 - 416913 + | 50S ribosomal protein L10 TERM 418 417286 - 417271 - g 75 -4 -5.2166 | GAAGAAGCTAAAAAA CAACTT GAAG AAGCTG GCGCTAAGGTTGAGC rplL 416932 - 417309 + | 50S ribosomal protein L7/L12 TERM 419 417324 - 417350 + F 78 -6.7 -4.62054 | opp_overlap 417327 417331, overlap 417327 417331 ATTTTTTTTGTTTTA AAAGAAAGGAT TTTAT ATCCTTTCTTG TTTTCCTTTAATTAG TERM 420 417347 - 417327 - f 83 -8.4 -4.07568 | opp_overlap 417324 417327 417331, overlap 417331 TTTTTTGTTTTAAAA GAAAGGAT TTTAT ATCCTTTC TTGTTTTCCTTTAAT TERM 421 417327 - 417347 + F 85 -8.4 -4.39375 | opp_overlap 417327 417331, overlap 417324 417331 TTTTTTGTTTTAAAA GAAAGGAT TTTAT ATCCTTTC TTGTTTTCCTTTAAT TERM 422 418417 - 418400 - g 88 -4.2 -5.72254 | opp_overlap 418400 TTAAAGAACAAAAAA CATTTG ATATAG CAAATG ATTTGGCTAATGGAG TERM 423 420551 - 420537 - g 79 -5.8 -5.1615 | opp_overlap 420526, overlap 420526 TGAAGATTTAAAAAA TCATTT CCA AAATGA GAAGAAAAAGCTCAA TERM 424 420574 - 420561 - g 84 -6.7 -5.25772 | AAATGAGAAGAAAAA GCTCA AAAG TGAGC ATGATGAAAAACTTG rpoB 417406 - 421539 + | DNA-directed RNA polymerase, beta chain TERM 425 421781 - 421767 - g 85 -2.8 -5.88197 | opp_overlap 421767 GCAAATACAAAAAAA TGCGTT TTA AAGGCA TTAAATGTGAAAAGT TERM 426 422503 - 422490 - g 72 -5.3 -4.76088 | opp_overlap 422490 GAAATGAAAAAAGAA TGCTT CAAG AAGCA GTTGATGCTTTATTT rpoC 421532 - 426085 + | DNA-directed RNA polymerase, beta' chain TERM 427 426111 - 426093 - f 93 -10.4 -3.91846 | opp_overlap 426093, overlap 426087 AAAATTAAATTTAAA CCTTGTAA AAT TTACAAGG TTTTTCTTCTTTTTT TERM 428 426093 - 426111 + F 100 -10.4 -5.54403 | opp_overlap 426093 426087 AAAATTAAATTTAAA CCTTGTAA AAT TTACAAGG TTTTTCTTCTTTTTT TERM 429 426273 - 426254 - g 70 -3.6 -5.10077 | overlap 426256 AAAGAGCGCAAAAAA GTTTTAGA AAAA TCTAAATC TCCAGCGCTTAAAAA rpsL 426212 - 426595 + | 30S ribosomal protein S12 rpsG 426663 - 427133 + | 30S ribosomal protein S7 fusA 427146 - 429221 + | translation elongation factor G TERM 430 429228 - 429257 + T 75 -7.2 -4.07535 | opp_overlap 429233, overlap 429229 AATGGTTAAATCTAT ATCAAGATGGGC AAAAAA GCTCATCTTGAA TTATTTATGACCCTT TERM 431 429229 - 429256 + T 83 -10.7 -3.03798 | opp_overlap 429233, overlap 429228 ATGGTTAAATCTATA TCAAGATGGGC AAAAAA GCTCATCTTGA ATTATTTATGACCCT Cla_0454 429809 - 429540 - | hypothetical protein TERM 432 429804 - 429786 - G 82 -7.5 -4.82667 | opp_overlap 429786 429789 GTATGAGAGTAAAAA GAAGAGT TTGTC ACTCTTC TTCATCGGTATTTTT Cla_0455 431166 - 429796 - | conserved hypothetical protein, putative efflux protein (DUF21 domain protein) Cla_0456 432225 - 431245 - | transmembrane transport protein, SbmA/BacA family TERM 433 431817 - 431798 - G 72 -5.1 -4.70613 | AAAATCGGAACAAAA GCAATTA AAGTCA TAATTGC CTTAACAAAAGCCAA Cla_0457 433704 - 432226 - | sodium/proline symporter TERM 434 433647 - 433635 - G 80 -6.3 -4.95896 | ACAAACCTATAAAAA GCATT AAA AATGC ATAGGTAATAAAAGT Cla_0458 433847 - 435052 + | saccharopine dehydrogenase TERM 435 435076 - 435053 - f 89 -9.7 -4.25658 | opp_overlap 435052 435051 AGTTTAGGAAAATAA TCTCAAGTC TTTTTT GACTTGAGA AAGTTTTAATAATGA modB 435088 - 435765 + | molybdenum ABC transporter, permease protein TERM 436 436335 - 436316 - f 79 -8 -3.90762 | TAGTCTTTAAAAACA CTTTTTCT TTGA AGAAAAAG ATTAAACTTATCCAA TERM 437 436961 - 436941 - f 77 -8.3 -3.53343 | AAGTCTCTTGTGAAA TCCAACGGC TTA ACCGTTGAA CTGCTTGGGAAACTG TERM 438 437837 - 437854 + F 74 -9.1 -3.07291 | opp_overlap 437837 GTCGTAACAAGGTAA CCGTAGG AGAA CCTGCGG TTGGATCACCTCCTT TERM 439 437975 - 437956 - f 74 -5.1 -4.76644 | AAGATTGATGAAAAA GCTAATT TTGGGG AATTAGC TCAGCTGGGAGAGTG TERM 440 438035 - 438022 - f 77 -5.3 -5.08088 | opp_overlap 438018 438022 AAGCGTTAAGAAAAA GCAAA CTGC TTTGC TTTTTTAGCTTTTCT TERM 441 438022 - 438035 + F 85 -5.3 -5.28315 | opp_overlap 438022, overlap 438018 AAGCGTTAAGAAAAA GCAAA CTGC TTTGC TTTTTTAGCTTTTCT TERM 442 438973 - 438956 - f 91 -11.3 -3.66803 | opp_overlap 438955 438954, overlap 438949 GCGTAAGAGGGCAAA CCCAGTG CTTG CACTGGG GGTTGTAGGACTGCA TERM 443 441625 - 441635 + F 74 -5.4 -4.73388 | TTATAAGCATCACTT CCTT GTT AAGG TTTTTAATAAAGCTT TERM 444 441820 - 441803 - f 85 -4.3 -5.8901 | opp_overlap 441803 ACATAAAATAAAAAA TAAAATA AAGA TATTTTA TAATCTAAATTTATT Cla_0465 442827 - 443372 + | conserved hypothetical protein (DUF411 domain protein) TERM 445 443390 - 443365 - T 81 -9.9 -3.27511 | opp_overlap 443369, overlap 443369 ATAATTTAATCAAGA CAAACTAAGCA ATTT TGCTTAGTTTA TTTTATATATTAATG TERM 446 443369 - 443386 + T 93 -8.5 -4.87008 | opp_overlap 443365 443369 TTTAATCAAGACAAA CTAAGCA ATTT TGCTTAG TTTATTTTATATATT TERM 447 443386 - 443369 - T 85 -8.5 -4.2772 | opp_overlap 443369, overlap 443365 TTTAATCAAGACAAA CTAAGCA ATTT TGCTTAG TTTATTTTATATATT tonB2 444036 - 443383 - | TonB domain protein exbD2 444422 - 444033 - | TonB system transport protein ExbD TERM 448 444240 - 444250 + g 89 -4 -5.88476 | ATTTTCTTTATCGAT TAAG ATG CTTA TTTTTTCTTTATTTT TERM 449 444440 - 444419 - G 73 -8.9 -3.17075 | opp_overlap 444438 TTTTTGGTAATTTAA GCATTTTTA TCCT TAAAAATGC GATATGCATTACTCA exbB2 444846 - 444415 - | TonB system transport protein ExbB Cla_0469 445000 - 447096 + | iron-regulated outer membrane virulence protein, TonB receptor CfrA TERM 450 447111 - 447146 + T 70 -8.5 -2.63089 | gap 1, overlap 447115 ACTTTGTATAGTTGG GGAACCAAAG-AGCTT GTTAA GAGCTTCTTTGGTTTC GTCTTTAGGATCGTA dnaX 448625 - 447093 - | DNA polymerase III, gamma and tau subunits TERM 451 448031 - 448042 + g 78 -3 -5.5353 | opp_overlap 448039, overlap 448039 GTTTTAAAGCTTCCT TTTC ATAA GAAA TTTTTTCTTGCTCTA TERM 452 448614 - 448624 + g 72 -5.4 -4.81685 | GTATTTTATCGCAAG TGCT TGA AGCA TTTTTACTCATTCAT rho 449932 - 448628 - | transcription termination factor Rho TERM 453 450066 - 450043 - H 71 -7 -3.9122 | TAGCTTTGTAAATAA TTTTTAAAAT ACTG ATTTTAAAAA AATGATAAAATATTG TERM 454 452283 - 452270 - g 74 -5.3 -4.90296 | overlap 452259 AAAAGCTTACAAAAA GCTAT GCAA ATAGC TAAAAAAACTTATCA Cla_0472 450107 - 452452 + | heavy metal translocating P-type ATPase Cla_0473 452449 - 452655 + | hypothetical protein TERM 455 452647 - 452661 + T 71 -7.1 -3.96481 | opp_overlap 452647 TTAAAAAATAAAAAA CAGCC ATGAA GGCTG TTTAGATTATTTTTT TERM 456 452661 - 452647 - T 100 -7.1 -6.04324 | opp_overlap 452647 TTAAAAAATAAAAAA CAGCC ATGAA GGCTG TTTAGATTATTTTTT Cla_0474 452973 - 452668 - | cytochrome c family protein Cla_0475 453104 - 453619 + | conserved hypothetical protein, putative phosphatase waaD 453616 - 454569 + | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 457 455492 - 455470 - g 86 -6.4 -5.48787 | overlap 455459 AGAAGAGATAAAAAA CCTCAAAAAA GCT TCTTTTGAAG ATAAAATTAAAAGCA waaE 454562 - 455935 + | D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase TERM 458 455980 - 455968 - g 75 -4.1 -5.27779 | TTCAACATCAAAAAA CCTTG GAG CAAAG TTTAAAATTAAAAGA TERM 459 456154 - 456138 - g 82 -5.1 -5.3472 | opp_overlap 456136 456138 AAAAAAGAAAGAAAA GCTTTAG CTG CTATAGC TCTTAGTACAGATAC gmhA 455925 - 456485 + | phosphoheptose isomerase TERM 460 456513 - 456480 - T 70 -6.3 -4.06864 | gap 1, opp_overlap 456479 456481 456486, overlap 456482 456507 TTGATAGAAGAAGAA TATT-AAGTTTGGG TTATTTT CCCAAACTTAAATA ATATTCAATTTGATC TERM 461 456510 - 456482 - T 87 -10.5 -3.61971 | opp_overlap 456481 456479 456486, overlap 456480 456507 GATAGAAGAAGAATA TTAAGTTTGGG TTATTTT CCCAAACTTAA ATAATATTCAATTTG pyk 457944 - 456493 - | pyruvate kinase mqo 459303 - 457957 - | malate:quinone oxidoreductase TERM 462 458796 - 458772 - G 74 -8.7 -3.29043 | opp_overlap 458772 458774 AAGCTTGTTCTATAA GATTTTGACTC ATC AAGCCAAAATC TACTGTAGTATAAAC Cla_0481 460034 - 459411 - | transcriptional activator, putative, Baf family Cla_0482 460353 - 460021 - | hypothetical protein Cla_0483 461350 - 460355 - | conserved hypothetical lipoprotein Cla_0484 461892 - 461347 - | hypothetical protein gatC 462042 - 462329 + | glu-tRNAGln amidotransferase, subunit C Cla_0486 462351 - 462920 + | conserved hypothetical integral membrane protein, CvpA family fur 462910 - 463365 + | ferric uptake regulation protein lysS 463376 - 464878 + | lysyl-tRNA synthetase glyA 464879 - 466120 + | serine hydroxymethyltransferase TERM 463 466256 - 466240 - g 87 -8.1 -4.72486 | GATAAATTTGAAAAA GTTAATG CTC CATTAAC TGCTAGTGTTATACA Cla_0490 466117 - 466662 + | conserved hypothetical protein (DUF1882 domain protein) TERM 464 466853 - 466843 - g 78 -4 -5.46657 | CAGGCGAAGAAAAAA CATT GCA AATG CCATCAGAACCACAA Cla_0491 466680 - 467486 + | hypothetical protein TERM 465 468263 - 468221 - g 100 -9.5 -5.81032 | gap 1, opp_overlap 468236, overlap 468224 468229 GAATGTCAAAAAAAA GAAGAAATTTTTAAAGCCAT GGAG ATGGCTTT-AAAACTCCCTC AGTGACTAAACCAAG TERM 466 468261 - 468224 - g 100 -10.1 -4.96028 | opp_overlap 468236, overlap 468221 468229 TGTCAAAAAAAAGAA GAAATTTTTAAAGCCAT GGAG ATGGCTTTAAAACTCCC TCAGTGACTAAACCA TERM 467 468256 - 468229 - g 100 -13 -3.50103 | opp_overlap 468236, overlap 468224 468221 AAAAAAAGAAGAAAT TTTTAAAGCCAT GGAG ATGGCTTTAAAA CTCCCTCAGTGACTA aroE 467483 - 468268 + | shikimate 5-dehydrogenase dnaJ 469383 - 468262 - | co-chaperone and heat shock protein racR 469497 - 470168 + | two-component response regulator TERM 468 470899 - 470882 - g 79 -5.5 -5.13016 | opp_overlap 470884, overlap 470884 AATCAAAAGCAAAAA GATCGCC TAGT GGCGATT TTTGAAAGACTTGAA TERM 469 470897 - 470884 - g 81 -8.1 -4.16392 | opp_overlap 470884, overlap 470882 TCAAAAGCAAAAAGA TCGCC TAGT GGCGA TTTTTGAAAGACTTG TERM 470 470884 - 470897 + G 85 -8.1 -4.58283 | opp_overlap 470882 470884 TCAAAAGCAAAAAGA TCGCC TAGT GGCGA TTTTTGAAAGACTTG TERM 471 471072 - 471057 - g 75 -4 -5.1971 | ATCAAAAAGTAAAAA TCTCCT ACAA AGAAGA TACTATGATAGTTGC racS 470165 - 471397 + | two-component sensor histidine kinase TERM 472 471861 - 471849 - g 73 -3.5 -5.18726 | opp_overlap 471849 TTTGTAGAAGAAAAA TTAAA AGA TTTAA ATTTGAGTTTTTCTC recR 471399 - 471971 + | recombination protein RecR Cla_0497 472986 - 471958 - | hypothetical protein TERM 473 472423 - 472446 + g 72 -4.8 -5.00412 | gap 1, opp_overlap 472423 TTTTTCCTTTGAAAT GATAA-AAGAA TAA TTCTTATTATC TTTTTGGTTATGTTT TERM 474 472894 - 472881 - G 74 -5.3 -4.86293 | TAATAAAAATCAAAA TGCTT ATAA AAGCA TAAATGAAGAATAAT uvrC 474776 - 472983 - | excinuclease ABC, subunit C TERM 475 473203 - 473187 - G 74 -8 -3.71108 | opp_overlap 473180 473186 473187 AAAACTAATTGCAAA GCGATG TGCTT CATCGC GTAATTTTTGCAAAA TERM 476 473211 - 473225 + g 73 -3.6 -5.31877 | overlap 473208 473209 TTCATCGCGTAATTT TTGCAA AAA TTGTAA TTTTTTATCATCAGT TERM 477 474295 - 474305 + g 91 -4 -6.10295 | opp_overlap 474295 TAAAAAAGACAAAGC TCTT TAC AAGA TTTTTTTTGTCTTAG TERM 478 474577 - 474595 + g 77 -4.6 -5.2166 | opp_overlap 474577 GTGATAAATTCTAAA TGATAAGT TTG ACTAATCA TTTTTTGAATTCTTA Cla_0499 475221 - 474769 - | hypothetical protein TERM 479 474849 - 474879 + g 71 -7.7 -3.42809 | opp_overlap 474819 474858, overlap 474858 GATTTTTAAAATTCC CATTAGAAAGCTC TAGGT GAGCTTTTTTATG TTCATTAATAGTATT TERM 480 474858 - 474870 + g 85 -4.8 -5.50925 | opp_overlap 474858, overlap 474849 AATTCCCATTAGAAA GCTC TAGGT GAGC TTTTTTATGTTCATT TERM 481 475347 - 475333 - H 81 -2.8 -6.01187 | overlap 475334 AAGCAAATAAAAAAA TTCCAA TCT TTGGAG AGTGAAATATGAGTA TERM 482 475346 - 475334 - H 70 -6.3 -4.17052 | overlap 475333 AGCAAATAAAAAAAT TCCAA TCT TTGGA GAGTGAAATATGAGT TERM 483 475929 - 475942 + G 70 -8.1 -3.08327 | GCAGGAGGTGCTTGG TCGCC ATTT GGCGA TATTACCACTTTGAT nhaD 475356 - 476714 + | Na+/H+ antiporter guaA 476724 - 478259 + | GMP synthase (glutamine-hydrolyzing) Cla_0502 478811 - 478260 - | ribosomal RNA adenine dimethylase; phospholipid N-methyltransferase TERM 484 479023 - 479011 - g 70 -5.5 -4.2528 | TTTGAATTTAATAAA CACGC ATG GCATG ATAAAAGAAGTATGC TERM 485 479034 - 479052 + G 79 -8.2 -3.95219 | opp_overlap 479033 479034 479036, overlap 479036 GCATGATAAAAGAAG TATGCCAA CGG TTGGCATG TTTGTCGAATTTAGA TERM 486 479050 - 479036 - g 73 -8.6 -3.15228 | opp_overlap 479034 479036, overlap 479034 479033 ATGATAAAAGAAGTA TGCCAA CGG TTGGCA TGTTTGTCGAATTTA TERM 487 479036 - 479050 + G 77 -8.6 -3.56262 | opp_overlap 479036 479034 479033, overlap 479034 ATGATAAAAGAAGTA TGCCAA CGG TTGGCA TGTTTGTCGAATTTA TERM 488 479376 - 479387 + G 71 -2.2 -5.36441 | TATTATTGATTTTTT TGCT ATGA AGCG TTTTTTATATAAGGC TERM 489 479826 - 479812 - g 81 -3.6 -5.626 | overlap 479814 GAGTTGATAAAAAAA TCTTTC TAT GAAAAA AATTTTACTATTTTT TERM 490 479848 - 479829 - g 74 -2.2 -5.52384 | opp_overlap 479829 479831, overlap 479831 TTTCTATGAAAAAAA TTTTACTA TTTT TAGTAATA GTTTTAATATGGCAA Cla_0503 478924 - 480363 + | hypothetical protein purD 480625 - 481875 + | phosphoribosylamine--glycine ligase Cla_0505 481872 - 482330 + | conserved hypothetical protein, RDD family TERM 491 483525 - 483545 + G 71 -3.3 -5.2696 | opp_overlap 483525 TTTACCTTTAATTTA TCATACAAG TTT TTTGGATGA TTTTTTAAATTTTGC Cla_0506 482323 - 484356 + | conserved hypothetical protein, putative organic solvent tolerance protein TERM 492 484596 - 484609 + G 74 -6.7 -4.35518 | opp_overlap 484596, overlap 484608 TTAGTTTACAATGAA GCCTT GGTT AAGGC TTTTGATATAAGCTT Cla_0507 484356 - 485012 + | hypothetical protein TERM 493 485051 - 485010 - f 95 -6.9 -5.42259 | opp_overlap 485014 TTACCTTTAAAAAAA TAAATTTATACCTGAGCAA CAAG TTGTTTAGATATAAATTTA TAGGCAAAATAAAAA TERM 494 485107 - 485067 - f 83 -5 -5.48213 | opp_overlap 485061 485062 485067 485070, overlap 485061 485069 485070 TAGGCAAAATAAAAA CAGGCTTTTTAAGTTTTA GTTTT TAAAATTTAAAAAGCTTA TTTGGTTTTGCCTAT TERM 495 485067 - 485107 + F 82 -7.9 -4.22524 | opp_overlap 485061 485067 485069 485070, overlap 485061 485062 485070 TAGGCAAAATAAAAA CAGGCTTTTTAAGTTTTAG TTT TTAAAATTTAAAAAGCTTA TTTGGTTTTGCCTAT TERM 496 485104 - 485070 - f 75 -8.9 -3.20051 | opp_overlap 485061 485067 485062 485070, overlap 485061 485069 485067 GCAAAATAAAAACAG GCTTTTTAAGTTTTA GTTTT TAAAATTTAAAAAGC TTATTTGGTTTTGCC TERM 497 485070 - 485104 + F 100 -11.8 -4.21465 | opp_overlap 485061 485070 485069 485067, overlap 485061 485067 485062 GCAAAATAAAAACAG GCTTTTTAAGTTTTAG TTT TTAAAATTTAAAAAGC TTATTTGGTTTTGCC pnp 485145 - 487253 + | polyribonucleotide nucleotidyltransferase TERM 498 487255 - 487284 + F 100 -13.9 -4.77867 | opp_overlap 487255 TAGATTTAGCCTAAA TTTTGAGCATATT AAAA AATATGCTCAAAA TTTTATATTATATCT TERM 499 487284 - 487255 - f 100 -13.9 -3.61654 | opp_overlap 487255 TAGATTTAGCCTAAA TTTTGAGCATATT AAAA AATATGCTCAAAA TTTTATATTATATCT TERM 500 488537 - 488518 - f 79 -8 -3.90762 | TAGTCTTTAAAAACA CTTTTTCT TTGA AGAAAAAG ATTAAACTTATCCAA TERM 501 489163 - 489143 - f 77 -8.3 -3.53343 | AAGTCTCTTGTGAAA TCCAACGGC TTA ACCGTTGAA CTGCTTGGGAAACTG TERM 502 490039 - 490056 + F 74 -9.1 -3.07291 | opp_overlap 490039 GTCGTAACAAGGTAA CCGTAGG AGAA CCTGCGG TTGGATCACCTCCTT TERM 503 490177 - 490158 - f 74 -5.1 -4.76644 | AAGATTGATGAAAAA GCTAATT TTGGGG AATTAGC TCAGCTGGGAGAGTG TERM 504 490224 - 490237 + F 85 -5.3 -5.28315 | opp_overlap 490224, overlap 490220 AAGCGTTAAGAAAAA GCAAA CTGC TTTGC TTTTTTAGCTTTTCT TERM 505 490237 - 490224 - f 77 -5.3 -5.08088 | opp_overlap 490220 490224 AAGCGTTAAGAAAAA GCAAA CTGC TTTGC TTTTTTAGCTTTTCT TERM 506 491175 - 491158 - f 91 -11.3 -3.66803 | opp_overlap 491157 491156, overlap 491151 GCGTAAGAGGGCAAA CCCAGTG CTTG CACTGGG GGTTGTAGGACTGCA TERM 507 493827 - 493837 + F 74 -5.4 -4.73388 | TTATAAGCATCACTT CCTT GTT AAGG TTTTTAATAAAGCTT TERM 508 494022 - 494005 - f 85 -4.3 -5.8901 | opp_overlap 494005 ACATAAAATAAAAAA TAAAATA AAGA TATTTTA TAATCTAAATTTATT TERM 509 495212 - 495222 + G 74 -6.8 -4.3586 | overlap 495196 GTATTAGGTTCTACT GCAC TTA GTGC TTTTAATATAGGTGG Cla_0522 495152 - 496414 + | conserved hypothetical protein, possible helicase Cla_0523 496417 - 497061 + | hypothetical protein Cla_0524 497568 - 497062 - | outer membrane lipoprotein carrier protein, LolA family TERM 510 498284 - 498268 - g 71 -6.7 -3.97088 | overlap 498263 CGTGATAATATGAAA TTTTCAA AGC TTGAAAA AGTACAAAGAGAGCA secA 497686 - 500277 + | preprotein translocase, SecA subunit Cla_0526 500286 - 501575 + | sigma-54 dependent DNA-binding response regulator asd 501589 - 502605 + | aspartate-semialdehyde dehydrogenase Cla_0528 502617 - 503123 + | conserved hypothetical integral membrane protein (UPF0114 domain protein) hemE 503136 - 504158 + | uroporphyrinogen decarboxylase Cla_0530 504155 - 505063 + | conserved hypothetical protein, putative radical SAM domain protein TERM 511 505090 - 505078 - T 76 -6.3 -4.60041 | opp_overlap 505078 505077 ATTTATTGCGAAAAA CTCTT GAC AAGAG CATTTTTTTCTTATA TERM 512 505296 - 505270 - T 89 -11.1 -3.49653 | opp_overlap 505270 ATGATTTTTATATAA CTAGTATTTTC GTTAT GAAAATACTAG TTTTTGATATCAAAA TERM 513 505270 - 505296 + T 100 -11.8 -4.8048 | opp_overlap 505270 ATGATTTTTATATAA CTAGTATTTTCG TTA TGAAAATACTAG TTTTTGATATCAAAA Cla_0532 507695 - 505293 - | conserved hypothetical integral membrane protein (TPR domain protein) serS 508939 - 507704 - | seryl-tRNA synthetase TERM 514 508644 - 508664 + g 78 -6.1 -4.79352 | overlap 508642 GGGGTATTTGGTATT GCTAGAGCA ATT TGTCCTAGC TTTTCTTCTAACTCA TERM 515 508692 - 508706 + g 73 -3.6 -5.26247 | TCATTAACAATTTTT GATTGA GCA TTAATC TTTTCTTTATTTTGA trpS 509910 - 508951 - | tryptophanyl-tRNA synthetase TERM 516 509733 - 509723 - G 84 -6.8 -5.22039 | opp_overlap 509723 CCTAAACTCAAAAAA GCTG CTG CAGC TTTGAGTGAATTTTG aroK 510404 - 509907 - | shikimate kinase Cla_0536 511773 - 510388 - | conserved hypothetical protein, predicted GTP-binding protein Cla_0537 511873 - 512805 + | conserved hypothetical integral membrane protein (DUF6 domain protein) Cla_0538 512795 - 514156 + | purine/xanthine transport protein TERM 517 514446 - 514479 + G 71 -4.7 -4.82901 | gap 1 TCAAGCGAGCATAGC GGCT-GAGGTTGTAGA TGT TTTACAAATTCCAGCC TTTTTATGCAGGCAA kdsA 514174 - 514980 + | 3-deoxy-D-manno-2-octulosonate-8-phosphate synthase ribH 514993 - 515463 + | riboflavin synthase, beta subunit nusB 515465 - 515863 + | transcription antitermination factor NusB pyrF 515860 - 516543 + | orotidine 5'-phosphate decarboxylase TERM 518 516529 - 516568 + T 76 -6.6 -4.57518 | opp_overlap 516531 516534 516541, overlap 516531 516541 TGCGAGAATATATTA GAGCATTTAAAATAAGCC TTAA GGCTTATTTTAAATAAAC TTTCATTTTTTTATT TERM 519 516566 - 516531 - T 79 -10 -2.93633 | opp_overlap 516529 516531 516541, overlap 516534 516541 CGAGAATATATTAGA GCATTTAAAATAAGCC TTAA GGCTTATTTTAAATAA ACTTTCATTTTTTTA TERM 520 516563 - 516534 - T 100 -13.9 -2.7012 | opp_overlap 516531 516529 516541, overlap 516531 516541 GAATATATTAGAGCA TTTAAAATAAGCC TTAA GGCTTATTTTAAA TAAACTTTCATTTTT TERM 521 516541 - 516556 + T 77 -7.6 -4.20106 | opp_overlap 516534 516531 516541, overlap 516531 516529 TTAGAGCATTTAAAA TAAGCC TTAA GGCTTA TTTTAAATAAACTTT TERM 522 516556 - 516541 - T 77 -7.6 -4.22652 | opp_overlap 516541 516531 516529, overlap 516534 516531 TTAGAGCATTTAAAA TAAGCC TTAA GGCTTA TTTTAAATAAACTTT Cla_0543 516967 - 516554 - | conserved hypothetical META domain lipoprotein TERM 523 516947 - 516957 + g 85 -2.6 -5.85011 | TAAGCTTGCCATGTT TAAT GCG ATTA TTTTTTTCATTTTTA Cla_0544 518571 - 516979 - | MCP-domain signal transduction protein TERM 524 518450 - 518468 + g 71 -7.4 -3.73953 | GTATCTAAATTTGCA CGGCTGAT TCT ATCGGTCG TTTGCTGAGAATCAT TERM 525 518541 - 518517 - G 71 -7.3 -3.85542 | TGATAATAAAACTAA TTAGCAATG TAGAAAT CATTGCTAA AGATATCTTCGCACC purH 520119 - 518587 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 526 519497 - 519507 + g 70 -5.4 -4.62336 | TTTTCTCCATATCTT GTGT CAA ACAC TTTTTGACCTACGAT Cla_0546 520886 - 520116 - | DnaJ-like protein TERM 527 520232 - 520244 + g 75 -4.9 -5.0133 | opp_overlap 520232 TGTTTGCGTTTAAAA TATCA GGA TGATA TTTTTTAGCAAGCTC TERM 528 520779 - 520793 + g 70 -4.2 -5.00616 | opp_overlap 520782 520783, overlap 520782 TTTAAAACCTTGAGA GAAGCT TTT AGCTCC TTTTTTAAAAGAGCC TERM 529 520814 - 520783 - G 70 -9 -2.70215 | gap 1, opp_overlap 520779 520782, overlap 520782 AAACCTTGAGAGAAG CTTTTAG-CTCCTTT TTT AAAAGAGCCTAAAAG ATCATCTTTACCCCA purL 523066 - 520889 - | phosphoribosylformylglycinamidine synthase, PurL subunit trmE 524407 - 523079 - | tRNA modification GTPase, TrmE TERM 530 523203 - 523192 - G 72 -4.4 -5.0925 | opp_overlap 523192 GTTCAAAAGCAAAAA GTTC TAAA GAAC TTTCTTTTAATAAAT Cla_0549 525243 - 524404 - | hypothetical protein oxaA 526807 - 525227 - | 60 kDa inner-membrane protein Cla_0551 527154 - 526771 - | conserved hypothetical protein (DUF37 domain protein) rnpA 527387 - 527142 - | ribonuclease P protein component TERM 531 527289 - 527302 + g 74 -8.1 -3.6761 | overlap 527287 AAAAGCTGATCTTAA GAGCC TTTT GGCTC TATTTCTTACAACAG rpmH 527599 - 527465 - | 50S ribosomal protein L34 Cla_0554 527741 - 528211 + | conserved hypothetical protein, putative acetyltransferase (GNAT family) Cla_0555 528211 - 528822 + | hypothetical protein Cla_0556 528819 - 530036 + | hypothetical protein Cla_0557 530394 - 530014 - | 4-hydroxybenzoyl-CoA thioesterase family protein TERM 532 530448 - 530467 + r 70 -2.2 -5.52807 | TTTTCATAAATTTTT TCATTG TTTGCCTT CAATGA TTTTTATTTCTTCTT Cla_0558 534008 - 530448 - | type II restriction-modification enzyme TERM 533 531471 - 531507 + g 78 -10.5 -2.7682 | opp_overlap 531473 531481, overlap 531470 531473 ATAGAATTTTTTATA TATTTTAGAATTGTCAA TTT TTGATAAGTCTAAAATA CTTATATATGGTGGG TERM 534 531473 - 531505 + g 72 -8.7 -2.92712 | opp_overlap 531473 531481, overlap 531471 531470 AGAATTTTTTATATA TTTTAGAATTGTCAA TTT TTGATAAGTCTAAAA TACTTATATATGGTG TERM 535 531712 - 531731 + g 78 -4.4 -5.4433 | gap 1, overlap 531714 531715 TATTTTTCTTTCAAG GCTTCTAAA TCT TTTAGA-GC TTTTTCTTTGTCTAT TERM 536 532257 - 532280 + g 91 -9 -4.82855 | opp_overlap 532257 532256 532259, overlap 532270 ACAATTTTCTATAAT GAGTTTTTTG CACT CAAAAAGCTC TTTTTGAATTTGATG TERM 537 533623 - 533605 - G 80 -2.4 -5.67063 | overlap 533607 TCTATGATAAAAAAA TCTTTTGC AGT GCAAATAA TGATGAATTTTATAA TERM 538 533695 - 533681 - G 70 -3.6 -5.06052 | overlap 533676 TTAAAAAATACAAAA CACTTT CAT AAAATG CTTTAGATGATAAAT Cla_0559 534126 - 534776 + | thiol:disulfide interchange protein, DsbA family TERM 539 534779 - 534793 + F 70 -7.2 -3.49771 | opp_overlap 534778 534774, overlap 534777 534774 TTCAGCTAAATAATG CCTTTA TTT TAAAGG TGTTATTAATCTTAT astA 534820 - 536670 + | arylsulfate sulfotransferase TERM 540 536692 - 536675 - T 100 -7 -5.65927 | opp_overlap 536670 536675 CATTTAAATAAAAAA GGGCTT TAAAAT AAGCCC TTTAATTTTATAAAT TERM 541 536675 - 536692 + T 74 -7 -4.27483 | opp_overlap 536675, overlap 536670 CATTTAAATAAAAAA GGGCTT TAAAAT AAGCCC TTTAATTTTATAAAT Cla_0561 538028 - 536700 - | C4-dicarboxylate transporter, anaerobic TERM 542 538135 - 538155 + r 74 -2.7 -5.72254 | overlap 538141 AGAGTATAGTGTAAG TTTTATTAA TAG TAAATAAAA TTTTTTATTATTTAA TERM 543 538180 - 538216 + r 100 -5.4 -6.08342 | overlap 538182 ATTTAAATAAATATT TACCAATATTTTGA ATTTGTTTG TCAAAATATTGGTC TTTTTTTGTTTATTG TERM 544 538182 - 538214 + r 86 -8 -4.6372 | overlap 538180 TTAAATAAATATTTA CCAATATTTTGA ATTTGTTTG TCAAAATATTGG TCTTTTTTTGTTTAT pepD 539494 - 538226 - | aminoacyl-histidine dipeptidase TERM 545 538773 - 538787 + g 70 -5 -4.58663 | ATTTTAAAATGATTA TTTTCC TTT GGAGAA TTTTTAAAAAATGCT Cla_0563 539548 - 540072 + | thermonuclease family protein (Snase-like) Cla_0564 540081 - 540266 + | hypothetical protein Cla_0565 540809 - 540246 - | hypothetical protein Cla_0566 541687 - 540812 - | methyltransferase, putative TERM 546 541662 - 541676 + g 71 -7.2 -3.7212 | GGATGTTTTAAGGCT TGCTTT AAC AAAGCA TTATCTTGCATATTT TERM 547 541704 - 541719 + r 88 -6.1 -5.29445 | opp_overlap 541704, overlap 541698 TTTTTCCTTAAAAAA CTCCC TTATTT GGGAG TTTTTATTATTGAAG TERM 548 541719 - 541704 - R 79 -6.1 -5.00616 | opp_overlap 541704 541698 TTTTTCCTTAAAAAA CTCCC TTATTT GGGAG TTTTTATTATTGAAG flaC 542475 - 541726 - | flagellin Cla_0568 542975 - 542496 - | probable integral membrane protein Cla_0569 543809 - 543006 - | modification methylase, HemK family Cla_0570 544993 - 543806 - | peptidase, M48 family TERM 549 543883 - 543893 + g 72 -4 -5.13722 | overlap 543877 TTTTACTTGTTTTAA CAAA AGC TTTG TTTTCTTTTGCTAAG TERM 550 544349 - 544339 - G 72 -6.8 -4.14541 | CATCAATTATATAAA CACC ATT GGTG CTAAAGCCACATTTT TERM 551 544727 - 544739 + g 77 -4.9 -5.18371 | CAAAAACAAAGTATT TTCTA AGG TAGAA TTTTCTTTTATAAAA TERM 552 544787 - 544775 - G 70 -4.1 -4.98255 | TTTTAAGTATAAAAA GCCAA AAT TTAGC CAAACGATGTTGATG Cla_0571 546986 - 545049 - | ABC transporter, ATP-binding protein TERM 553 546868 - 546892 + g 79 -5 -5.31877 | AAGCTTGATTTTCCT TCGCCATTTT TACCT ATGATGGCGA TTTTTTCTCCTAAAT TERM 554 547054 - 547066 + H 72 -3.4 -5.36018 | opp_overlap 547054 GCTTAAATAAAATTA CACT ATGAG AGTG TTTGTTTTTTTTACT Cla_0572 547058 - 548188 + | metallophosphoesterase psd 548189 - 548998 + | phosphatidylserine decarboxylase Cla_0574 549263 - 548973 - | conserved hypothetical protein, possible flagellar biosynthesis protein Cla_0575 551275 - 549266 - | hypothetical protein TERM 555 549405 - 549415 + g 82 -4 -5.63504 | TTTAGCTCATGTGCT CTTT CGT AAAG TTTTTTTCTAAAATT Cla_0576 552461 - 551265 - | major facilitator superfamily transporter Cla_0577 552940 - 552455 - | hypothetical protein TERM 556 552910 - 552874 - G 93 -6 -5.71712 | opp_overlap 552874 552899 CTTTATAGAAAAAAA CTCCTGCTAAGA AAAGTAAATTTAA TCCTAGCAGGAG TTTTAATAAAATTTT Cla_0578 553202 - 552924 - | hypothetical protein hemL 554476 - 553199 - | glutamate-1-semialdehyde-2,1-aminomutase Cla_0580 554817 - 554473 - | hypothetical protein folD 554849 - 555745 + | 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase lepP 555742 - 556590 + | signal peptidase I TERM 557 557470 - 557482 + G 73 -5.5 -4.53034 | overlap 557471 GTAAGTGCGGAGCTA TGCCA GGA TGGCG TTTTGGTTATATGGC aspB 556755 - 557921 + | aspartate aminotransferase tgt 558012 - 559133 + | queuine tRNA-ribosyltransferase TERM 558 559164 - 559182 + G 76 -9 -3.47349 | opp_overlap 559164 559167, overlap 559167 AATTTATCGATAGTA TAAGCATT TCT AATGCTTA TTATGAATTTGAAGA TERM 559 559182 - 559164 - g 70 -9 -2.65112 | opp_overlap 559164 559167, overlap 559167 AATTTATCGATAGTA TAAGCATT TCT AATGCTTA TTATGAATTTGAAGA TERM 560 559244 - 559262 + G 74 -3.2 -5.38054 | overlap 559245 ATAAGGCAAATTTTT ATTTTTCA AAA TGAAAAAA TTTTTATTTATGAGA TERM 561 559719 - 559740 + G 76 -5.3 -5.01422 | ATTTAATAGTTGGAT TTTTTGGTA TGAA TACTAAAAA TTTATTTTTATCTGA Cla_0585 559127 - 559885 + | hypothetical protein TERM 562 560641 - 560621 - g 70 -4.1 -4.88736 | opp_overlap 560609, overlap 560609 GAGGATTTAGAAAAA TCTTTTG AGGCTTG CAAAAGA GAAGCGCTTAGCTTT pycA 560084 - 561526 + | acetyl-CoA carboxylase, biotin carboxylase Cla_0588 561523 - 561783 + | hypothetical protein Cla_0589 561783 - 562502 + | conserved hypothetical protein, putative arginyl tRNA transferase Cla_0590 562521 - 563327 + | DnaJ domain protein TERM 563 563432 - 563455 + G 71 -3.2 -5.31545 | overlap 563435 TATTTTTTTTAAGTT GCATTCTTAT AACT ATAGGAATAC TTTTTTCATATTCTT ftsW 563398 - 564561 + | cell division protein, FtsW/RodA/SpoVE family cjaC 564754 - 565512 + | amino acid ABC transporter, permease/substrate-binding lipoprotein TERM 564 565551 - 565517 - T 82 -9.5 -3.5861 | opp_overlap 565523, overlap 565513 565518 565523 ATTTACAATAATCAA CTTAAAGCCTTGATA CTTGC TTTCAAGGCTTTAAA AAAATACTCTATATC TERM 565 565550 - 565518 - T 82 -10.8 -2.74443 | opp_overlap 565523, overlap 565517 565513 565523 TTTACAATAATCAAC TTAAAGCCTTGATA CTTGC TTTCAAGGCTTTAA AAAAATACTCTATAT Cla_0593 566778 - 565513 - | conserved hypothetical protein, putative NifS-like aminotransferase TERM 566 565937 - 565947 + g 71 -6.8 -3.88601 | AGTTGAATAATTCCA GGTG TGC CACC TTCTTCTAAATTTTC TERM 567 566973 - 566983 + G 70 -5.4 -4.58236 | ATTTTAAATGTTTTT GCTT TAA AAGC TTTTGATATTTTATC Cla_0594 566835 - 567686 + | conserved hypothetical protein (DUF234 domain protein) TERM 568 568720 - 568679 - g 100 -9.9 -4.44277 | gap 1, opp_overlap 568681 568681 568684, overlap 568680 568681 GATGAAAATCCAAAA TGTTTTTTTATAGAGCTTAA AAT TTAAGCTCTATAAAATAA-A TTTTTTCTTAAAATA Cla_0595 567689 - 568705 + | two-component sensor histidine kinase TERM 569 568720 - 568680 - f 90 -11.5 -3.25481 | opp_overlap 568681 568681 568684, overlap 568679 568681 ATGAAAATCCAAAAT GTTTTTTTATAGAGCTTAA AAT TTAAGCTCTATAAAATAAA TTTTTTCTTAAAATA TERM 570 568681 - 568720 + F 100 -13.4 -5.46657 | gap 1, opp_overlap 568681 568679 568680, overlap 568681 568684 TGAAAATCCAAAATG TTT-TTTTATAGAGCTTAA AAT TTAAGCTCTATAAAATAAA TTTTTTCTTAAAATA TERM 571 568681 - 568719 + F 100 -15 -3.86909 | opp_overlap 568681 568679 568680, overlap 568681 568684 TGAAAATCCAAAATG TTTTTTTATAGAGCTTAA AAT TTAAGCTCTATAAAATAA ATTTTTTCTTAAAAT TERM 572 568719 - 568681 - f 100 -15 -2.54204 | opp_overlap 568681 568681 568684, overlap 568679 568680 TGAAAATCCAAAATG TTTTTTTATAGAGCTTAA AAT TTAAGCTCTATAAAATAA ATTTTTTCTTAAAAT TERM 573 568684 - 568716 + F 100 -16.7 -2.99438 | opp_overlap 568681 568679 568680, overlap 568681 568681 AAATCCAAAATGTTT TTTTATAGAGCTTAA AAT TTAAGCTCTATAAAA TAAATTTTTTCTTAA Cla_0597 568839 - 569306 + | rRNA methylase, SpoU family Cla_0598 570031 - 569303 - | amino acid ABC transporter, ATP-binding protein Cla_0599 570776 - 570024 - | amino acid ABC transporter, permease protein Cla_0600 571000 - 572442 + | sodium:alanine symporter family protein glyS 572616 - 574610 + | glycyl-tRNA synthetase, beta subunit Cla_0602 574607 - 575413 + | peptidase, M23/M37 family TERM 574 575785 - 575802 + G 71 -2.1 -5.44721 | gap 1, opp_overlap 575785, overlap 575788 AATTCTTTAGAAGAA TGCCATTT TAA AAATG-CA TTTTTTTACGCTAAT TERM 575 576239 - 576213 - g 93 -8.2 -5.16133 | opp_overlap 576213 ATTAGAATACAAAAA CCAAAATCAA GCCTTAA TTGATTTTGG TTTGGAAGAAATTAT TERM 576 576213 - 576239 + G 74 -8.2 -3.54638 | opp_overlap 576213 ATTAGAATACAAAAA CCAAAATCAA GCCTTAA TTGATTTTGG TTTGGAAGAAATTAT Cla_0603 575413 - 576366 + | hypothetical protein ribB 577378 - 576356 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 577 577437 - 577465 + r 79 -9.1 -3.61328 | opp_overlap 577444 577459, overlap 577443 577460 TTTCTTGACATTATG TTAAAAATGGTAT ATA ATACCACTTTTAA TTTAAAAATATTGCT TERM 578 577458 - 577444 - R 81 -7.2 -4.63928 | opp_overlap 577443 577437 ACATTATGTTAAAAA TGGTAT ATA ATACCA CTTTTAATTTAAAAA TERM 579 577625 - 577613 - R 75 -9.1 -3.28712 | TCGTCGGGCTCATAA CCCGA AGG TCGGG AGTTCAAATCTCCCC TERM 580 577929 - 577943 + r 70 -7.8 -3.25942 | opp_overlap 577929 CGAACCTGCGACCAA CCGGTT ATG AGCCGG TTGCTCTAACCAACT rodA 579133 - 578024 - | rod shape-determining protein TERM 581 578156 - 578141 - G 75 -4 -5.1861 | TCCATGACTAAAAAA TGGCAT AGGT ATACCA ACAACAGGAGCAAAA TERM 582 578984 - 578972 - G 100 -4.1 -6.4275 | TAAAAAGAAAAAAAA TGCAA ATC CTGCA AAACCTACCAAAGTA TERM 583 579236 - 579216 - gH 78 -6.9 -4.67556 | ATAATATGCTAAAAA TTTCATCAC TTT GTGAAGAAA GATTGGATATTTTTT rluD' 579206 - 580168 + | ribosomal large subunit pseudouridine synthase D Cla_0610 580122 - 581336 + | fibronectin type III domain protein TERM 584 581370 - 581401 + G 86 -9.6 -3.85209 | opp_overlap 581370 AAGTTTTAAAAGAAA TTCAACTCCCTTTT GAAA AAGATGGAGTTGAA TTCTTATGGCTTGCT TERM 585 581401 - 581370 - g 81 -7.4 -4.66535 | opp_overlap 581370 AAGTTTTAAAAGAAA TTCAACTCCCTTTT GAAA AAGATGGAGTTGAA TTCTTATGGCTTGCT TERM 586 582133 - 582115 - g 86 -3.2 -5.95166 | TTTAATCAAAAAAAA TGAAAATT TAG AAATTTCA AGCAAATATGAAGAT trmB 581336 - 582526 + | tRNA (guanine-N(7)-)-methyltransferase ftsE 582556 - 583215 + | cell division ATP-binding protein FtsE ftsX 583202 - 584008 + | cell division protein FtsX TERM 587 584001 - 584036 + F 75 -4.3 -5.1383 | gap 1, opp_overlap 584007, overlap 584007 TAATGTTTAAGGTTA GAAAATGAAAAAATGC TTTTT GC-TTTTTTTGTTTTC TTTTTCTGTGTTATT TERM 588 584007 - 584023 + G 87 -2.3 -6.17669 | opp_overlap 584007, overlap 584001 TTAAGGTTAGAAAAT GAAAAAA TGC TTTTTGC TTTTTTTGTTTTCTT Cla_0614 584005 - 585180 + | peptidase, M23/M37 family pyrH 585236 - 585961 + | uridylate kinase rpoZ 585970 - 586188 + | DNA-directed RNA polymerase, omega chain TERM 589 586280 - 586305 + G 90 -7.7 -5.0916 | opp_overlap 586280 586281 ATGGTCTTTCCACAA TCTGCTGTTTT AGAA AAAGCAGTAGA TTTTTGTATTCAAAA spoT 586172 - 588361 + | ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase TERM 590 589263 - 589247 - g 76 -5.2 -5.07567 | opp_overlap 589247 TTACACCCTAAAAAA GCTAAA GAAAA TTTAGC TTTAGAAATTACTGC TERM 591 589502 - 589490 - g 80 -6.3 -4.91712 | GTTAATGGAGAAAAA GTTCA AGA TGAAC AATTCCAACTAGAAA tyrS 588374 - 589576 + | tyrosyl-tRNA synthetase TERM 592 589887 - 589907 + G 78 -10.5 -2.72379 | opp_overlap 589887, overlap 589900 ATATGCAAGTAATAA TTATGCGCA AAT TGCGCGTAA TGCTTGCGAGCTTGG TERM 593 589907 - 589887 - g 77 -8.3 -3.83006 | opp_overlap 589887 589900 ATATGCAAGTAATAA TTATGCGCA AAT TGCGCGTAA TGCTTGCGAGCTTGG TERM 594 590480 - 590469 - g 70 -4.4 -4.85782 | opp_overlap 590469 GGGGCCAAAAATAAA TTGC ATTA GCAA TTGTGTTGCGCCATG Cla_0619 589573 - 590673 + | oxidoreductase (2-nitropropane dioxygenase family) TERM 595 590723 - 590757 + G 82 -11.1 -2.70932 | opp_overlap 590723 590726, overlap 590726 GTTTTTGCTAATGCA GAAGTTAAGAAATTT GATCA AAATTTTTTAACTTC TAATTCAGAAGAAAA TERM 596 590757 - 590723 - g 70 -8.9 -2.52464 | opp_overlap 590723 590726, overlap 590726 GTTTTTGCTAATGCA GAAGTTAAGAAATTT GATCA AAATTTTTTAACTTC TAATTCAGAAGAAAA TERM 597 591280 - 591268 - g 81 -3.5 -5.53079 | AAAAGATATAAAAAA TTTTA CTT TAAAA GGTGATAATTTTCGT TERM 598 592427 - 592443 + G 70 -4.4 -4.88222 | AAAGTTGTAGATGGT GGAGTT AGAGA AGCTCC TTTTTGGGTTTTAGT amiA 590666 - 592606 + | N-acetylmuramoyl-L-alanine amidase Cla_0621 592603 - 594441 + | conserved hypothetical protein (DUF752 domain protein) Cla_0622 594572 - 595402 + | hypothetical protein Cla_0623 596505 - 595399 - | peptidase M50, putative membrane-associated zinc metallopeptidase pgsA 597038 - 596502 - | CDP-1,2-diacyl-sn-glycero-3-phosphate phosphatidyltransferase TERM 599 597084 - 597068 - R 100 -10.9 -4.86731 | TGTGTTTAAAGAAAA TACCCCA AAG TGGGGTA ATGAATCATTTAAAG Cla_0625 597869 - 597090 - | oxidoreductase, short chain dehydrogenase/reductase family dapA 598765 - 597869 - | dihydrodipicolinate synthase Cla_0627 600008 - 598755 - | peptidase, M16 family pyrD 601063 - 600005 - | dihydroorotate dehydrogenase Cla_0629 602878 - 601115 - | ABC transporter, ATP-binding protein/permease MsbA, putative cysS 604253 - 602871 - | cysteinyl-tRNA synthetase TERM 600 603072 - 603054 - G 74 -7.6 -3.78026 | overlap 603052 GCCAAATTGAAAATA TTTTATAG TAT CTATAAAA CCTATGCCAAAAATA TERM 601 603103 - 603086 - G 73 -5.7 -4.63184 | opp_overlap 603085 AACCTATGCCAAAAA TAAAAGA AAGT TCTTTTA AGGTTTTTTCTAATT mviN 605706 - 604240 - | virulence factor protein MviN TERM 602 604613 - 604602 - G 83 -3 -5.72622 | overlap 604604 GCCATAAAGAAAAAA GTTT TTGT AAAC CAAAAGGTAAAAGTC TERM 603 605773 - 605801 + H 74 -6.3 -4.54047 | opp_overlap 605773 ATAATTTTAACTAAA TTTTGATTTTA TTTTTGC TAAAATCAAAA TTTTATATACAATAA TERM 604 606031 - 605992 - g 70 -4 -4.90917 | opp_overlap 605991 605995 AAAGTCAATGAAAAA GAATTAAAAATTTT TGAAGAAGATGG AAAATTTTTAATTC ATGATTTAAATATAG TERM 605 606426 - 606415 - g 82 -4.4 -5.61824 | GAAAATTCAAAAAAA CACA ATGA TGTG ATGAATAGAAATTAT TERM 606 606671 - 606655 - g 80 -2.3 -5.82316 | ATTATTCAAAAAAAA TCTATTT ATG AGATAGA AAATTATTTAGAATT TERM 607 607473 - 607463 - g 82 -4 -5.51165 | opp_overlap 607463, overlap 607453 AAAAGCTTAAAAAAA TTCA AGA TGAA CTTTTAAAATCAAAA Cla_0632 605830 - 607686 + | hypothetical protein TERM 608 607827 - 607816 - g 74 -3 -5.38348 | overlap 607808 AAAAAGATCAAAAAA TTGA GCTT TCAA TCACACAAATTATCA ruvA 607683 - 608234 + | Holliday junction DNA helicase, DNA-binding subunit ddlA 608251 - 609291 + | D-alanine--D-alanine ligase Cla_0635 609294 - 609509 + | hypothetical protein Cla_0636 609512 - 610255 + | putative hydrolase, alpha/beta fold family TERM 609 610398 - 610409 + G 79 -5.8 -5.06016 | TTAATAATTCCTTAT TGCG CTTT CGCA TTTTCTTTATATAGT TERM 610 610754 - 610735 - g 76 -6.6 -4.40561 | GTTTTGGAAAAACAA GTATAAAA AATT TTTTATAC GAAGTTTTAAAAGAT murF 610248 - 611648 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 611 611676 - 611651 - T 73 -6.9 -4.18762 | opp_overlap 611640 611651 AAGTTTTATGTAAAA CCATTTAGCTT AAAA AGGCCAAATGG TTTCCATGAATTTTG flgH 612361 - 611660 - | flagellar L-ring protein FlgH TERM 612 612200 - 612182 - G 74 -6.1 -4.46212 | TTTTTTATCAGAAAA TAAAGGA TTATC TCCTTTA CCAAACAGCGATCCA TERM 613 612575 - 612557 - g 74 -3.2 -5.40072 | TTTTTGTGAAAAAAA TAAAGAAA AAA TTGCTTTA ATATGCTCAAAAACC pta 612447 - 613916 + | phosphate acetyltransferase TERM 614 614814 - 614804 - g 76 -5.4 -5.07971 | opp_overlap 614802 614804 614805, overlap 614805 CAAAATAATGAAAAA GCAA GAC TTGC TCTTGATATGTTTTG ackA 613925 - 615109 + | acetate kinase TERM 615 615134 - 615107 - T 100 -10 -4.91852 | opp_overlap 615110, overlap 615110 CTTATTAAAAATAAA TAACCTTGAGTT TTAA AACTCAAGGTTT GTTTTAAAATGCAGG TERM 616 615110 - 615131 + T 100 -11.7 -4.67048 | opp_overlap 615107 615110 ATTAAAAATAAATAA CCTTGAGTT TTAA AACTCAAGG TTTGTTTTAAAATGC TERM 617 615131 - 615110 - T 100 -11.7 -4.53857 | opp_overlap 615110, overlap 615107 ATTAAAAATAAATAA CCTTGAGTT TTAA AACTCAAGG TTTGTTTTAAAATGC Cla_0641 615908 - 615138 - | hypothetical protein Cla_0642 617182 - 615977 - | conserved hypothetical protein, putative glycosyltransferase TERM 618 616576 - 616595 + g 76 -9.4 -3.10589 | opp_overlap 616573 616576 616580, overlap 616580 GATTTTCATAAACCA TCAAGGAA AAAA TTCCTTGA TCTTGCCAATTTTTA TERM 619 616595 - 616576 - G 75 -9.4 -3.01422 | opp_overlap 616576 616580, overlap 616573 616580 GATTTTCATAAACCA TCAAGGAA AAAA TTCCTTGA TCTTGCCAATTTTTA Cla_0643 617851 - 617186 - | ABC transporter, permease protein Cla_0644 618807 - 617851 - | ABC transporter, ATP-binding protein valS 621423 - 618811 - | valyl-tRNA synthetase TERM 620 620530 - 620510 - G 70 -6.3 -4.07568 | opp_overlap 620510 TCCTTGCCTTTAAAA TTTAAACAA TGC TCGTTTAAA ATTCCTTTTTCATTA TERM 621 621492 - 621520 + r 82 -10.6 -2.84422 | opp_overlap 621491 621494 621498, overlap 621491 621484 621494 621498 AGAAGTTTTGAAATT TAGAAATTAGTT ATAAA AACTAATTTCTA CTTTACGATTGTTTT TERM 622 621494 - 621518 + r 74 -8.8 -2.95527 | opp_overlap 621491 621494 621498, overlap 621492 621491 621484 621498 AAGTTTTGAAATTTA GAAATTAGTT ATAAA AACTAATTTC TACTTTACGATTGTT TERM 623 621518 - 621494 - R 72 -8.8 -2.64651 | opp_overlap 621494 621492 621491 621484 621498, overlap 621491 621498 AAGTTTTGAAATTTA GAAATTAGTT ATAAA AACTAATTTC TACTTTACGATTGTT Cla_0646 622550 - 621498 - | hypothetical protein TERM 624 622414 - 622431 + g 91 -4.9 -5.9873 | GTGTCTGGTGGAGTG TAGCTTT GATA AGAGCTA TTTTTTTTATAATCA ppa 623091 - 622573 - | inorganic pyrophosphatase TERM 625 622677 - 622687 + g 72 -4 -5.15526 | CAAGCATTTTATAGG TTTC AAA GAAA TTTTTAATTTTGTCT adk 623674 - 623102 - | adenylate kinase aspS 625422 - 623671 - | aspartyl-tRNA synthetase Cla_0650 625508 - 626338 + | conserved hypothetical protein, putative inorganic polyphosphate/ATP-NAD kinase recN 626338 - 627852 + | DNA repair protein RecN TERM 626 628295 - 628281 - g 73 -3.6 -5.25154 | AAAAAAACAATAAAA CTAAAA TTA TTCTAG CAATCGCTAATGTAA Cla_0652 627914 - 629158 + | two component response regulator Cla_0653 629149 - 629946 + | TatD-related deoxyribonuclease Cla_0654 629946 - 631097 + | peptidoglycan-binding LysM:Lytic transglycosylase, catalytic (SLT family) rlpA 631033 - 631872 + | rare lipoprotein A Cla_0656 631877 - 632365 + | conserved hypothetical protein, putative YrbI family phosphatase TERM 627 632830 - 632818 - g 72 -4.9 -5.00138 | GATGTAAATCAAAAA GAATT AAA AATTC AAGGAATAAAAGCAT Cla_0657 632356 - 632862 + | hypothetical protein Cla_0658 632844 - 633302 + | OstA family protein Cla_0659 633299 - 633898 + | conserved hypothetical protein, predicted ATP/GTP-binding protein Cla_0660 633888 - 634379 + | hypothetical protein TERM 628 634642 - 634630 - g 74 -7.7 -3.7764 | AAAAAGAAAAACAGA GCTCT TTT AGAGC AAGAATTACAAGCTA pbpC 634381 - 636207 + | penicillin-binding protein 2 queA 637228 - 636200 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 629 636666 - 636682 + g 86 -10.1 -3.80855 | TGCAAGCTCGCAGTA GGTGCAG CAA CTGCGCC TTGATTTTTGGCAAA tatC 637955 - 637212 - | Sec-independent protein secretion pathway component TatC TERM 630 637610 - 637600 - G 72 -4.6 -4.96427 | overlap 637608 TAATAACAAAACAAA GCAC CAA GCGC AAACATAATGCTCGC TERM 631 637750 - 637740 - G 72 -4 -5.08011 | AAAAGCCGTAAAAAA TGAA ACC TTCA TCGCAGTAAACAAAG Cla_0664 638350 - 637958 - | Sec-independent protein secretion pathway component TatB, putative TERM 632 638425 - 638462 + H 100 -10.3 -5.29716 | opp_overlap 638429 638433 TATTATTACTTTTAC TATATTAATATATAAAG ATAT CTTGATATATTAATATA TTTTTGTTATATTGA Cla_0665 638502 - 639476 + | conserved hypothetical integral membrane protein (DUF318 domain protein) Cla_0666 639485 - 639802 + | transcriptional regulator, ArsR family Cla_0667 640848 - 639799 - | oxygen-independent coproporphyrinogen III oxidase HemN, putative TERM 633 640122 - 640137 + g 71 -9 -2.88839 | overlap 640121 CTATATAGTCTTTTC CTTGCC AGTA GGCAAG ATTGTGTTTGCAAAT TERM 634 640224 - 640234 + g 80 -2.4 -5.78622 | TAAAATGCTTTGCAA GGCG TGG CGCA TTTTTTTTAAAATGA TERM 635 641250 - 641226 - g 75 -4.5 -5.0925 | overlap 641220 GGCCAAAATCAAAAA TATTTTTTAGT TAG ATTAAAAAATA AAGCTATTATTAATT Cla_0668 640929 - 641399 + | MutT/NUDIX family hydrolase TERM 636 641993 - 641979 - g 73 -5.8 -4.59984 | AAAAGTTAGATAAAA TTTCTT ATG AAGAAA TGCTAGAGCTTGCAA lysC 641399 - 642601 + | aspartate kinase Cla_0670 642602 - 643138 + | hypothetical protein TERM 637 643169 - 643154 - g 75 -4.8 -5.10665 | opp_overlap 643154, overlap 643149 ATCTAAGAAATAAAA TCATTA TTCA TAATGA TTTTGAGCTAATGCA Cla_0671 643135 - 643791 + | putative DNA polymerase III delta prime subunit HolB folP 643778 - 644920 + | dihydropteroate synthase ligA 644923 - 646878 + | DNA ligase, NAD-dependent tlyA 646868 - 647590 + | ribosomal RNA large subunit methyltransferase, FtsJ family ribF 647556 - 648398 + | riboflavin kinase/FAD synthase Cla_0676 648398 - 649102 + | conserved hypothetical protein, possible methylase TERM 638 649114 - 649138 + T 90 -11.7 -3.12999 | opp_overlap 649114 649132 ATGAAATCTAAAAAA TGTTTAATCTT TCC AAGATTAAACA TTAAATCTAAAATGC TERM 639 649138 - 649114 - T 100 -11.7 -5.22943 | opp_overlap 649114, overlap 649132 ATGAAATCTAAAAAA TGTTTAATCTT TCC AAGATTAAACA TTAAATCTAAAATGC Cla_0677 650232 - 649132 - | conserved hypothetical protein, predicted GTP-binding protein (DUF933 domain protein) pepA 651680 - 650229 - | aminopeptidase, M17 family TERM 640 651297 - 651309 + g 77 -4.9 -5.29208 | TGATACAAAAATTTT TTCTA AAT TAGAA TTTGTTTTTTCTTTT Cla_0679 652270 - 651677 - | conserved hypothetical integral membrane protein, DedA family TERM 641 652023 - 652036 + g 71 -3.1 -5.29782 | opp_overlap 652020 ATGGCAAATTTACGC CTTTG AGTG CGAAG TTTTTTCTGAATGTA apt 652812 - 652273 - | adenine phosphoribosyltransferase Cla_0681 653141 - 652809 - | hypothetical protein rpiB 653575 - 653138 - | ribose 5-phosphate isomerase B cheB 653716 - 654267 + | protein-glutamate methylesterase TERM 642 654371 - 654361 - g 75 -4 -5.27779 | overlap 654365 CTTAATACTAAAAAA GATA TTT TATC TATAAAACTGCCTAA cheR 654277 - 655059 + | chemotaxis protein methyltransferase Cla_0685 656249 - 655056 - | conserved hypothetical integral membrane protein, putative transporter (DUF475 domain protein) TERM 643 655149 - 655132 - G 87 -8.5 -4.74084 | AAACCAAAAGTAAAA TGGCTTA ATTT TAAGCCA TGAAATTCAAATAAA Cla_0686 656356 - 657402 + | radical SAM domain protein TERM 644 657743 - 657733 - g 72 -4 -5.14563 | GTTTTGATGAAAAAA TCTT ACA AAGA TTAAAAACTTTAGCT Cla_0687 657402 - 658622 + | peptidase, M16 family TERM 645 658755 - 658734 - g 77 -8.9 -3.65832 | overlap 658732 AAAGTTTCCAAAAGA TACATTTTG TACC CAAAATGTA AAAATTATCAGCACG TERM 646 659683 - 659672 - g 78 -3 -5.5762 | ATCAAAGACAAAAAA TAAG TGAG CTTA GCAAAAATTCTCAAT recG 658612 - 660435 + | ATP-dependent DNA helicase TERM 647 660487 - 660473 - g 76 -2.8 -5.52096 | overlap 660475 AAAGGCAAGAAAAAA CACTTT AAT AAAGGG AATATTTTATTTTTT Cla_0689 660428 - 661030 + | conserved hypothetical protein, putative transcriptional regulator Cla_0690 661074 - 661721 + | conserved hypothetical protein, ABC transporter, His/Glu/Gln/Arg/opine family (permease protein) Cla_0691 661714 - 662373 + | conserved hypothetical protein, ABC transporter, His/Glu/Gln/Arg/opine family (permease protein) Cla_0692 662375 - 663112 + | conserved hypothetical protein, ABC transporter, His/Glu/Gln/Arg/opine family (ATP-binding protein) cjaA 663189 - 664016 + | amino acid ABC transporter, periplasmic solute-binding lipoprotein TERM 648 665113 - 665127 + G 70 -4.2 -4.96523 | overlap 665113 TTCTTATGCGATTTT GGGTTT CAT AACCCC TTTTATTGTTAATTT cjaB 664019 - 665242 + | major facilitator family transporter CjaB TERM 649 666272 - 666284 + G 72 -4.9 -4.98531 | opp_overlap 666259 666256 666272, overlap 666266 666266 TATCTTTTTGAAAAA GAAAA AAG TTTTC TTTTTGCTTTAAAAA TERM 650 666435 - 666415 - g 76 -7.6 -3.96216 | opp_overlap 666415 GCTTGATTTAAATAA GCAAATCC AACTA GGACTTGC TTTGTATTATTACGA Cla_0695 665309 - 666715 + | TrkA domain protein TERM 651 667269 - 667285 + G 75 -4.5 -5.03747 | ATGGCTGTGGTTTTT GATGAAA CGA TTTTATC TTTTTTAGAAAATTT aroB 666723 - 667781 + | 3-dehydroquinate synthase TERM 652 668389 - 668379 - g 88 -4 -5.67063 | TTTATGAGAAAAAAA TTCA AGA TGAA ATTAATAAAACAACA TERM 653 668769 - 668787 + G 83 -6.8 -5.055 | opp_overlap 668773 668780 668782, overlap 668785 GAAACCAATACATAG GAGATATC ATA GATATTTC TTTTTTAAGAATTAC Cla_0697 667778 - 669307 + | mechanosensitive ion channel family protein TERM 654 669831 - 669815 - g 77 -5.9 -4.98461 | overlap 669811 AAATAATAAAACAAA TTAAGCT TTT AGCTCAA AATGGCTATAGTGAA Cla_0698 669304 - 670560 + | MiaB-like tRNA modifying enzyme TERM 655 671549 - 671521 - g 75 -4.7 -5.15117 | opp_overlap 671521 TAAAATTTTAAAAAA TTACATGAGAG AAAAAAA CTCTAATGTAA ATTTAGAAAAAATTG ftsH1 670550 - 672148 + | cell division protein FtsH mog 672151 - 672678 + | molybdenum cofactor biosynthesis protein TERM 656 672695 - 672675 - T 100 -8.4 -5.35815 | opp_overlap 672675 TAGACCAAAGAAAAA GTAAGTCT AACTA AGACTTAC TTTGAGGTTTCATAG TERM 657 672675 - 672695 + T 79 -8.4 -3.73107 | opp_overlap 672675 TAGACCAAAGAAAAA GTAAGTCT AACTA AGACTTAC TTTGAGGTTTCATAG Cla_0701 673066 - 672692 - | rhodanese domain protein, putative TERM 658 673045 - 673029 - G 86 -7.3 -5.07652 | overlap 673030 TCTGCTAAAACAAAA CTAGCAC AAA GTGCTAA AGATAAAAATACTTT TERM 659 673044 - 673030 - G 77 -8.6 -3.63868 | overlap 673029 CTGCTAAAACAAAAC TAGCAC AAA GTGCTA AAGATAAAAATACTT Cla_0702 673404 - 673069 - | hypothetical protein TERM 660 673273 - 673311 + g 71 -6 -4.42653 | opp_overlap 673276, overlap 673276 GAAATTTTCATTCAT AAAGCCATTATCATCGCA AAG TGCGATGAGTATAGCTTC TTTTATAACTCCGCT TERM 661 673308 - 673276 - G 90 -9.9 -3.92075 | opp_overlap 673276 673273 ATTTTCATTCATAAA GCCATTATCATCGCA AAG TGCGATGAGTATAGC TTCTTTTATAACTCC TERM 662 673276 - 673308 + g 79 -7.7 -4.33182 | opp_overlap 673276, overlap 673273 ATTTTCATTCATAAA GCCATTATCATCGCA AAG TGCGATGAGTATAGC TTCTTTTATAACTCC htpG 675230 - 673401 - | heat shock protein HtpG, chaperone Hsp90 TERM 663 674803 - 674819 + g 71 -3 -5.26875 | GATATCCACACATAT GCTTTA TCTTC TAAGGC TTTTTTGCTTAAAAC Cla_0704 675609 - 675241 - | putative camphor resistance protein CrcB plsC 676295 - 675606 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 664 675995 - 676010 + g 76 -2.6 -5.58454 | TAGTTTTAAATACTG GAATTT TGCC AAGTTC TTTTTTTGCTATCCA Cla_0706 677478 - 676273 - | hypothetical protein TERM 665 677477 - 677451 - G 81 -3.8 -5.52986 | opp_overlap 677469, overlap 677453 677461 ACGCTAGCAAAAAAA CACAAAAAACTT TGA AAGTTTTTAGCA ATTTAAAAATCCTTC TERM 666 677475 - 677453 - G 74 -6.4 -4.40552 | opp_overlap 677469, overlap 677451 677461 GCTAGCAAAAAAACA CAAAAAACTT TGA AAGTTTTTAG CAATTTAAAAATCCT purQ 678122 - 677472 - | phosphoribosylformylglycinamidine synthase, PurQ subunit purS 678355 - 678119 - | phosphoribosylformylglycinamidine synthase, PurS subunit purC 679077 - 678364 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 667 678996 - 679022 + g 73 -6 -4.58242 | gap 1, opp_overlap 678995, overlap 678999 AATCATCTTTAAATT CTG-TGATGAG TAAATT CTCATCATCAG TTTTATACATTTTTT Cla_0710 680395 - 679079 - | peptidase, S41 family TERM 668 680036 - 680060 + g 75 -7.1 -4.13652 | TGGACTTCCTTCTAT TGGTGCTACCA CAG TGATTGCACCA TCTTTTTGTGTAATT TERM 669 680290 - 680306 + g 72 -5.1 -4.78149 | CTATTTTCTTTTCTG CTTCACT AGG AGTGGGG TTTTTAGCTTGTAAA clpB 680603 - 683176 + | protein disaggregating chaperone ClpB TERM 670 683174 - 683196 + F 90 -10 -4.14511 | opp_overlap 683174 683177, overlap 683177 GTCATTATTAAACAA TAAGCAAGTG TAA TACTTGCTTA TTTTAGAGTAAAATT TERM 671 683196 - 683174 - f 84 -9.3 -4.0274 | opp_overlap 683174 683177, overlap 683177 GTCATTATTAAACAA TAAGCAAGT GTAAT ACTTGCTTA TTTTAGAGTAAAATT TERM 672 683177 - 683193 + F 77 -7.3 -4.19746 | opp_overlap 683174 683177, overlap 683174 ATTATTAAACAATAA GCAAGTG TAA TACTTGC TTATTTTAGAGTAAA TERM 673 683193 - 683177 - f 70 -6.6 -4.13206 | opp_overlap 683177 683174, overlap 683174 ATTATTAAACAATAA GCAAGT GTAAT ACTTGC TTATTTTAGAGTAAA TERM 674 684287 - 684297 + G 70 -5.4 -4.63928 | GGTTGTATAGGTTGT TCAG AGC CTGA TTTTTGGGATACTAT hyaA 683336 - 684475 + | Ni/Fe-hydrogenase, small subunit hyaB 684478 - 686193 + | Ni/Fe-hydrogenase, large subunit hyaC 686209 - 686901 + | Ni/Fe hydrogenase, cytochrome b subunit hyaD 686898 - 687431 + | Ni/Fe hydrogenase, expression/formation protein TERM 675 687445 - 687427 - T 86 -8.9 -4.41241 | opp_overlap 687423 687427 TAAATTCTTATAAAA GCTAAGC AAAAA GCTTAGC TTAATTTTTAATCAT TERM 676 687427 - 687445 + T 83 -8.9 -3.85504 | opp_overlap 687427, overlap 687423 TAAATTCTTATAAAA GCTAAGC AAAAA GCTTAGC TTAATTTTTAATCAT Cla_0716 687875 - 687453 - | hypothetical protein TERM 677 687567 - 687580 + g 78 -3.1 -5.58074 | AACTTTAATTATACT TGCAT TTGG GTGCA TTTTTTTAATCGTTG TERM 678 688676 - 688664 - g 71 -3.4 -5.23316 | TAGGATATGAAAAAA GCAT GACTT ATGC ACATTTACCTATCAT gltX1 688009 - 689304 + | glutamyl-tRNA synthetase TERM 679 689335 - 689345 + G 88 -4 -5.68438 | overlap 689328 AAGTTTGATTGTATC TTTG GTG CAAA TTTTTTCTTTAGTGA Cla_0718 689306 - 689593 + | conserved hypothetical integral membrane protein, YGGT family TERM 680 690174 - 690158 - gT 82 -6.7 -4.80077 | GCAAAAGAAAAAGAA TTTACAA ATT TTGTAAA AGAAATTATCATTAA Cla_0720 691613 - 691119 - | conserved hypothetical lipoprotein Cla_0719 689594 - 691231 + | soluble lytic murein transglycosylase, SLT family TERM 681 691246 - 691291 + gF 78 -9.3 -3.28524 | opp_overlap 691249 691255, overlap 691249 691255 691272 GGTTTTTGTACCAAC TCATCAAGAGTGATTTTGTAA TAAC TTGCATAATCACTTTTGATAA TGTATTTAAATAATT TERM 682 691249 - 691288 + gF 84 -11 -2.81535 | opp_overlap 691249 691255, overlap 691246 691255 691272 TTTTGTACCAACTCA TCAAGAGTGATTTTGTAA TAAC TTGCATAATCACTTTTGA TAATGTATTTAAATA TERM 683 691255 - 691282 + gF 72 -6.4 -4.34947 | opp_overlap 691249 691255, overlap 691249 691246 691272 ACCAACTCATCAAGA GTGATTTTGTAA TAAC TTGCATAATCAC TTTTGATAATGTATT mobB 691700 - 692179 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 684 692966 - 692980 + G 73 -5.7 -4.62069 | opp_overlap 692965 TTTGAAAAAATTCAT GCAAG CACAC CTTGC TTTTTAGGATCAAAA fbp 692189 - 693037 + | fructose-1,6-biphosphatase Cla_0723 693037 - 693231 + | hypothetical protein TERM 685 694276 - 694254 - g 83 -7.9 -4.57073 | opp_overlap 694239 GATTTTTCTCAAAAA GCATTAATT GCTAG AATTAATGC AGAATTAAGCAATGA TERM 686 695036 - 695022 - g 76 -2.8 -5.54192 | ACTAATTTAAAAAAA GCTAAA ATC TTTGGC TATGAAAGCGAGGGT metS 693246 - 695135 + | methionyl-tRNA synthetase TERM 687 695362 - 695330 - g 70 -6.5 -4.10672 | opp_overlap 695331 695354, overlap 695331 TGAAGTGAAATTAAA TCTTGAAGATAAA GATGTAT TTTATCTTCAAGT TGATGATCTTGAAGA TERM 688 695361 - 695331 - g 78 -10 -3.0568 | opp_overlap 695331 695354, overlap 695330 GAAGTGAAATTAAAT CTTGAAGATAAA GATGTAT TTTATCTTCAAG TTGATGATCTTGAAG TERM 689 695331 - 695361 + G 87 -10.7 -3.27923 | opp_overlap 695331 695330, overlap 695354 GAAGTGAAATTAAAT CTTGAAGATAAAG ATGTA TTTTATCTTCAAG TTGATGATCTTGAAG Cla_0725 695136 - 696077 + | hypothetical protein peb2 696140 - 696883 + | major antigenic peptide PEB2 TERM 690 696918 - 696895 - T 82 -8.3 -3.83816 | opp_overlap 696891 696895 696911 ATAAATTAAGTTAAA GCATTTTAC TTTATT GTAAAATGC TTTTTAAATTATTTT TERM 691 696895 - 696918 + T 93 -8.3 -4.85195 | opp_overlap 696895, overlap 696891 696911 ATAAATTAAGTTAAA GCATTTTAC TTTATT GTAAAATGC TTTTTAAATTATTTT Cla_0727 697499 - 696927 - | conserved hypothetical protein, YceI family TERM 692 697154 - 697165 + g 71 -3 -5.32699 | overlap 697162 CATACATCTTACCTT TTTC ATTA GAAA TTTTTTCATATTTGC Cla_0728 698228 - 697563 - | transcriptional regulator, ExsB family TERM 693 697593 - 697607 + g 71 -5.7 -4.44797 | overlap 697600 AAAATCTTTCACATT GGCTT CTTTA AAGCC TTTTAATCTTAATAA Cla_0729 698281 - 698694 + | conserved hypothetical protein (UPF0054 domain protein) TERM 694 698873 - 698854 - g 74 -5.1 -4.86731 | overlap 698831 TTTGTCCAAACAAAA CAAAAAC AATACA GTTTTTG GGGTAGTGCTAAGAA Cla_0730 698695 - 699663 + | hypothetical protein TERM 695 699640 - 699665 + T 73 -9.2 -2.87229 | opp_overlap 699638 699640, overlap 699639 AATAATTCAAAATTA GCTTATTTGA GCAAAA TCAAATAAGC ATTTAATCATCAAAT TERM 696 699665 - 699640 - T 75 -9.2 -3.15579 | opp_overlap 699640 699639, overlap 699638 AATAATTCAAAATTA GCTTATTTGA GCAAAA TCAAATAAGC ATTTAATCATCAAAT Cla_0731 700078 - 699668 - | conserved hypothetical protein, putative periplasmic protein Cla_0732 700193 - 700723 + | conserved hypothetical integral membrane protein, Rhomboid family TERM 697 700922 - 700912 - g 72 -4 -5.02201 | opp_overlap 700912, overlap 700906 AAAACAGCACAAAAA CTTT GCA AAAG CTTTTCTTTAAAAGA Cla_0733 700720 - 701211 + | phosphohistidine phosphatase SixA, putative Cla_0734 701930 - 702613 + | aspartate racemase TERM 698 703073 - 703039 - g 71 -2.3 -5.3798 | gap 1 GAAGAAGAACAAAAA GCTCATATTTTTGATA TAAA TCTCAAAAAT-TGGGC AGGTATAAGTGGCTC xerD 702613 - 703680 + | integrase/recombinase murA 703738 - 704994 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 699 705827 - 705813 - g 70 -5.8 -4.23892 | TGTAAGCATGTAAAA GTTTTT AAT AAAAAC AACACGCTTTTTCTA moeA2 704991 - 706151 + | molybdopterin biosynthesis protein TERM 700 706152 - 706171 + T 72 -6.5 -4.23892 | opp_overlap 706152 GTTTTAAAAATTTAA TAGGGTA TTGCAC TACCCTA TTTTGAATGATTAAC Cla_0738 706478 - 706182 - | hypothetical protein TERM 701 706630 - 706614 - R 75 -9.5 -2.62983 | overlap 706617 CTCAGGGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA Cla_0740 707939 - 706668 - | hypothetical protein Cla_0741 708068 - 708754 + | flagellar basal body P-ring formation protein FlgA, putative TERM 702 708879 - 708861 - g 78 -6.1 -4.72986 | TATTGTGAGTAAAAA TGCAAAA ATAAG TTTTGCA AAAGAAAATTCTCTT TERM 703 708902 - 708888 - g 70 -3.6 -5.07652 | TTTTGCAAAAGAAAA TTCTCT TTT AGAAAA TATAGACTTTTTGCA ubiX 708751 - 709332 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase coaD 709336 - 709815 + | phosphopantetheine adenylyltransferase tmk 709806 - 710390 + | thymidylate kinase TERM 704 711564 - 711552 - g 71 -4.9 -4.84017 | AATTTTTTATAAAAA TTTAG ATA CTAAA GAAAATAAAAATATA hisS 710383 - 711609 + | histidyl-tRNA synthetase TERM 705 711809 - 711781 - g 86 -9.1 -4.01939 | opp_overlap 711790, overlap 711776 711785 711801 TAATCCATAAGCAAA TTGAGCAAATTTA TGA TAAATTTGCTAAA GCAAAAAAAGAATTT TERM 706 711805 - 711785 - g 76 -9.9 -2.72436 | opp_overlap 711790, overlap 711776 711781 711801 CCATAAGCAAATTGA GCAAATTTA TGA TAAATTTGC TAAAGCAAAAAAAGA TERM 707 712168 - 712153 - g 74 -9 -3.29074 | CAAATATAGGATTAA GAGTGC GTTT GCACTC AGCTGGAGTTGGAAT TERM 708 712357 - 712344 - g 71 -2.4 -5.41143 | CATCCTCTAAAAAAA GCTT TAAATG AAGC AGGAAACATTTACAC speA 711606 - 713435 + | arginine decarboxylase cysE 713432 - 714037 + | serine O-acetyltransferase murG 714034 - 715065 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 709 715081 - 715051 - T 71 -7.1 -3.96618 | opp_overlap 715054 TGTAAGGCTAAAGAA TTAGGAATTATTT AAATA AAATACTTCCTAA TCTAACCATATTTGA Cla_0749 715675 - 715058 - | hypothetical protein rpoN 716929 - 715682 - | RNA polymerase sigma-54 factor Cla_0751 717654 - 716929 - | ABC transporter, ATP-binding protein Cla_0752 718054 - 717647 - | conserved hypothetical protein (UPF0079 domain protein) Cla_0753 718299 - 718051 - | S4 RNA-binding domain protein argG 718413 - 719633 + | argininosuccinate synthetase rplI 719643 - 720086 + | 50S ribosomal protein L9 hslV 720086 - 720628 + | heat shock protein HslVU, ATP-dependent protease subunit HslV TERM 710 720705 - 720687 - g 71 -2.4 -5.41746 | overlap 720698 AATTGGTCAAAAAAA TGCTAAAA AAA TCATAGCA ATTGCTTTGAGAAAT TERM 711 720715 - 720698 - g 82 -4.1 -5.51165 | overlap 720687 AAAATGCTAAAAAAA TCATAGC AATT GCTTTGA GAAATCGTTATAGAA TERM 712 721753 - 721739 - g 70 -5 -4.56702 | overlap 721722 CTGCAATTAAAGAAA TTGCAA AAA TCGCAA GCAAGGCAAATGAAG hslU 720625 - 721944 + | heat shock protein HslVU, ATPase subunit HslU TERM 713 722119 - 722093 - g 74 -2.4 -5.54894 | gap 1 AATGCATGAAAAAAA CCAAGTGATAT TTATAG ATA-CACCTGG TTTACATGCAAGCTC era 721941 - 722813 + | GTP-binding protein Era TERM 714 723224 - 723206 - gf 93 -4.7 -6.11019 | AAAAATTAAAAAAAA CTTATAA ACACA TTATAAG CATAGATGATACTCA TERM 715 723351 - 723341 - gf 81 -2.6 -5.80003 | opp_overlap 723350 CCAACAAAGAAAAAA TAAA TCA TTTA AAATCTTTTAGTTTT TERM 716 723455 - 723439 - gf 75 -4.5 -5.03994 | TTGTATACACAAAAA TCATTTT ATG AAAACGA GAAAATAAAATATGA Cla_0759 722803 - 723813 + | hypothetical protein Cla_0760 723776 - 724315 + | hypothetical protein Cla_0762 724878 - 724663 - | hypothetical protein fliS 725246 - 724875 - | flagellar protein FliS fliD 727565 - 725265 - | flagellar filament cap protein FliD TERM 717 725774 - 725785 + g 70 -5.8 -4.27617 | opp_overlap 725765 725774 725773 TTAATACAAAAGGAT CTCC ATTT GGAG TTTTGCTCAGATCTA flaG 727909 - 727568 - | flagellar protein FlaG TERM 718 728055 - 728039 - R 70 -2.3 -5.46698 | opp_overlap 728016 728040, overlap 728023 728040 TTCAAAATTAAAAAA TTTCAAA CTT TTTGAAT AATTTTTCATCATTT ubiD 729824 - 728031 - | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 719 728325 - 728344 + g 91 -4.4 -6.07374 | overlap 728341 TTTATAAATTTGTAA TTTTTCAA AAAC TTGAGAAA TTTTTTCTTTTTTGT TERM 720 728341 - 728351 + g 88 -4 -5.80003 | overlap 728325 TTTTCAAAAACTTGA GAAA TTT TTTC TTTTTTGTTTATTAA TERM 721 729206 - 729217 + g 85 -2.2 -6.01187 | CCCCGCCTATTGCTA TGCT TACT GGCA TTTTTTTATTTGCTT hemC 730751 - 729825 - | porphobilinogen deaminase TERM 722 730205 - 730217 + g 71 -4.9 -4.82901 | GTTCAAATTTTTTCA CAAAT TTA ATTTG TTTTTCTAAACCCAA TERM 723 730734 - 730750 + g 71 -3 -5.32882 | overlap 730748 TTGGCTTTTTCTTGT TGCGAT GATTA ATTGCA TTTTTTATGCTCCTG Cla_0768 731137 - 730742 - | hypothetical protein proS 732831 - 731134 - | prolyl-tRNA synthetase hemA 734128 - 732821 - | glutamyl-tRNA reductase TERM 724 733729 - 733747 + g 79 -8.2 -3.89903 | AATGTACACCGCATC TTTGCTCT TGC AGGGCAAA TTTATAAGCATCTTT ispB 735021 - 734128 - | polyprenyl-diphosphate synthase TERM 725 734295 - 734327 + g 100 -9.3 -5.30189 | opp_overlap 734303 AAGCAAGCTCATCTA CACTTAAATCTTTCT TGT AGTAAGACTTAAGTG TTTTTTGATCTTGTG Cla_0772 735500 - 735072 - | hypothetical protein TERM 726 735505 - 735491 - G 72 -4.4 -5.04222 | CAAGTAAAGCAAAAA TAAATT TCA AATTTA ACCCTCATGCCCTAA Cla_0773 735766 - 735503 - | conserved hypothetical protein (DUF2018 domain protein) TERM 727 735705 - 735721 + g 84 -6.7 -5.27938 | CCCAAATTTGCATGT TTTATAG TTT CTATAAA TTTTTCTTTAGGAGT Cla_0774 736396 - 735770 - | conserved hypothetical protein, putative HAD superfamily hydrolase TERM 728 735917 - 735937 + g 71 -5.6 -4.4773 | TTTTAAACTATCGCC TATGAAAA TACTT TTTTCATA TTTTGCTTCATCTGC TERM 729 736018 - 736039 + g 71 -2.4 -5.44119 | opp_overlap 736010 CACCTAATATTTTAT CAAAATAT GAAAGA ATGTTTTG TTTTTTTAAAATAGG Cla_0775 736725 - 736393 - | hypothetical protein TERM 730 736467 - 736487 + g 77 -4.7 -5.21709 | opp_overlap 736469, overlap 736469 TTAGCTTATATAAGG CATTGGCTT TTG AAGCTAAGG TTTTTTGATCTAAAC Cla_0776 738347 - 736722 - | sodium/hydrogen exchanger family protein hspR 738746 - 738372 - | transcriptional regulator, MerR family cbpA 739622 - 738756 - | co-chaperone-curved DNA binding protein A htrA 739772 - 741190 + | periplasmic serine protease DO; heat shock protein HtrA Cla_0780 741203 - 741877 + | two-component response regulator Cla_0781 741874 - 743118 + | two-component sensor histidine kinase rep 743126 - 745153 + | ATP-dependent DNA helicase TERM 731 745226 - 745209 - g 72 -2.8 -5.37345 | TTCAAGGAGAAAAAA TGAATA GTGTAT TATTCA AAGGAAATAAAGTAA tpx 745208 - 745732 + | thiol peroxidase TERM 732 745761 - 745735 - f 95 -11.1 -4.25104 | opp_overlap 745742, overlap 745742 TGGTTGCCACTAAAA TTTAAAAGCCT TTTAT AGGCTTTTAAA ACTTAAAAACATGGA Cla_0784 745772 - 746377 + | transcriptional regulator, Crp/Fnr family Cla_0785 746437 - 746637 + | hypothetical protein msrA 747140 - 746634 - | peptide methionine sulfoxide reductase hypA 747495 - 747130 - | hydrogenase expression/formation protein HypA TERM 733 747395 - 747378 - G 70 -6.3 -4.07687 | gap 1 AGCTTCTTTGTAAAA GTGGAGGT TCA ACC-CCAC TTAAACGCCCTATTT TERM 734 747518 - 747542 + r 82 -7.9 -4.2828 | TTCTTGGTAAAAGTT CGCCTTTTGGA GTT TCTAAAATGCG TTTTGCTCCATAAGC hypE 748505 - 747495 - | hydrogenase expression/formation protein HypE hypD 749559 - 748468 - | hydrogenase expression/formation protein HypD TERM 735 749090 - 749074 - GR 81 -5.3 -5.22312 | ATTGATATGAAAAAA TAAATTT TTT AAATTTA AGGCTATACTTTTTT hypC 749827 - 749546 - | hydrogenase assembly chaperone HypC hypB 750561 - 749827 - | hydrogenase accessory protein HypB TERM 736 750402 - 750390 - G 72 -6.3 -4.2586 | opp_overlap 750390 TTAGATTAATACAAA GAGTA TTA TACTC ATTAAAATGCTCTCT hypF 752823 - 750625 - | transcriptional regulatory protein HypF TERM 737 751891 - 751881 - G 70 -5.4 -4.66264 | TAAAATGTTCAAAAA GCAT TAA ATGC GTTCCCATATAAGCT Cla_0793 754363 - 752804 - | hypothetical protein TERM 738 753713 - 753724 + g 73 -5.8 -4.57569 | opp_overlap 753712 753723 AGCATTAAATTTAAG CCTC ATTA GAGG TTTTTCAACCCCTGC Cla_0794 755060 - 754395 - | conserved hypothetical protein (DUF45 domain protein) TERM 739 754585 - 754612 + g 71 -5.7 -4.49556 | overlap 754606 ATATATGCTTTTTGA TGATTGCAAGA ACCCCA TCTTGAAATCA TTTCTTTAATACAAA Cla_0795 756352 - 755036 - | conserved hypothetical integral membrane protein, MATE family efflux protein TERM 740 755630 - 755604 - G 72 -5.2 -4.73108 | overlap 755606 GCTACAAAAGCAAAA GCTATGGTGTAT TGT ATAAACCATATC AAATGCTCTCCTGCT TERM 741 756395 - 756415 + r 74 -5.6 -4.89393 | opp_overlap 756395 TTTTGAAAATAAAAA GTAATTTT ACTTA AAAATTAC TTTTTGTAAGCTTTA TERM 742 756415 - 756395 - R 88 -5.6 -5.45802 | opp_overlap 756395 TTTTGAAAATAAAAA GTAATTTT ACTTA AAAATTAC TTTTTGTAAGCTTTA Cla_0796 757643 - 756999 - | conserved hypothetical protein (617 family) TERM 743 757365 - 757379 + g 79 -5 -5.24551 | opp_overlap 757365, overlap 757367 ATCATCTGTAAAAAT TGTAGC TGC GCTATA TTTTTCTTCATTTGA Cla_0797 758877 - 757645 - | hypothetical protein TERM 744 758315 - 758332 + g 71 -2.1 -5.4251 | ATAGTTTTTAAATTT TTATTTT GTAA AAGATAA TTTTTTGTATATAAA TERM 745 758897 - 758919 + r 76 -6.4 -4.60041 | opp_overlap 758897 TTTCCAAAATAAAAA TTTAACGACA TTA TATCGTTAAA TTTTTAAAAATAAAT TERM 746 758919 - 758897 - R 100 -8.6 -5.45802 | opp_overlap 758897 TTTCCAAAATAAAAA TTTAACGACA TTA TATCGTTAAA TTTTTAAAAATAAAT TERM 747 758939 - 758965 + r 73 -2.4 -5.72254 | TAAAAATAAATCACC CAAAAGCT CCACTCAAATA AGCTTTTG TTTTTTCTTCTTTAG pstB 759674 - 758934 - | phosphate ABC transporter, ATP-binding protein TERM 748 759416 - 759434 + g 85 -4.6 -5.60993 | CAAAAACATTTGGTT GTTGAAAT ACC ATTCCAAC TTTTTTTCTAAGCAC pstA 760759 - 759671 - | phosphate ABC transporter, permease protein pstC 761670 - 760756 - | phosphate ABC transporter, permease protein TERM 749 761624 - 761586 - G 100 -14.2 -4.25848 | AAGCCTCGATTAAAA TTGTTAGCATAATAGCAA AGC TTACTACTACGCTAACAA AAGCACAAAGAAAAA TERM 750 761644 - 761654 + g 85 -2.6 -5.86976 | ACAAAGAAAAAGCGT TAAT TTT ATTA TTTTTTCTTTTATCA pstS 762668 - 761685 - | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 751 762329 - 762343 + g 73 -3.6 -5.20781 | CTTGCATGCTTATAT TTAATG GAG CATTGA TTTTATTTTGTGCTA TERM 752 762976 - 762963 - g 87 -3.8 -5.87996 | opp_overlap 762963 CAATTAAGAAAAAAA GGCT ATATGG AGCC TGTGATTTTTCTTAG Cla_0802 762753 - 763412 + | two-component response regulator Cla_0803 763406 - 764695 + | two-component sensor histidine kinase cft 764774 - 765268 + | ferritin TERM 753 765304 - 765269 - f 72 -6.2 -4.27694 | opp_overlap 765268 765270 765272 765303, overlap 765266 765270 TTAATTAATAAATAA TTTTTTAGCCTCCACA AAAA TTTGGAGGCTAAATAT CTTTTAATTTAAAAG TERM 754 765303 - 765270 - f 78 -9.7 -3.15532 | opp_overlap 765268 765270 765272, overlap 765269 765266 TAATTAATAAATAAT TTTTTAGCCTCCACA AAAA TTTGGAGGCTAAATA TCTTTTAATTTAAAA TERM 755 765270 - 765303 + F 86 -9.7 -3.88396 | opp_overlap 765270 765269 765266, overlap 765268 765272 TAATTAATAAATAAT TTTTTAGCCTCCACA AAAA TTTGGAGGCTAAATA TCTTTTAATTTAAAA TERM 756 765272 - 765301 + F 93 -12.3 -3.51998 | opp_overlap 765270 765269 765266, overlap 765270 765268 ATTAATAAATAATTT TTTAGCCTCCACA AAAA TTTGGAGGCTAAA TATCTTTTAATTTAA TERM 757 765871 - 765887 + G 78 -6.7 -4.57073 | AAATACTCGAGACGG TTTGTTT ATC AAACAAA TTTTTAAAAGCAATA Cla_0805 765377 - 766012 + | conserved hypothetical protein, putative peptidase S24 TERM 758 768058 - 768086 + G 75 -7.5 -4.18042 | GGTGTTCATGGACCT GCTTATTCTAAGA AAA TCATAGAAGAAGC TTTAATTTATATCCA Cla_0806 766195 - 768132 + | cytochrome c family protein TERM 759 768164 - 768136 - f 85 -5.4 -5.29846 | overlap 768140 AATGGTAAATAAAAA CAAAGGAAGAAT GAAAA ATTCTTCCCTCA AATAAGGAGCTAGTC TERM 760 768160 - 768140 - f 100 -8.4 -5.12987 | overlap 768136 GTAAATAAAAACAAA GGAAGAAT GAAAA ATTCTTCC CTCAAATAAGGAGCT Cla_0807 768180 - 770246 + | cytochrome c family protein TERM 761 770245 - 770275 + F 89 -9.8 -4.46432 | opp_overlap 770247, overlap 770246 770247 TTAACACTATCTTAT AACCTTATTCGCTA TAA TAGCGAATAAGGAC TTTTCCTAATTTTTT TERM 762 770246 - 770274 + F 100 -13.3 -3.25419 | opp_overlap 770247, overlap 770245 770247 TAACACTATCTTATA ACCTTATTCGCTA TAA TAGCGAATAAGGA CTTTTCCTAATTTTT TERM 763 770247 - 770273 + F 100 -16.8 -2.53625 | opp_overlap 770247, overlap 770246 770245 AACACTATCTTATAA CCTTATTCGCTA TAA TAGCGAATAAGG ACTTTTCCTAATTTT TERM 764 770273 - 770247 - f 100 -16.8 -3.34787 | opp_overlap 770247 770246 770245 AACACTATCTTATAA CCTTATTCGCTA TAA TAGCGAATAAGG ACTTTTCCTAATTTT TERM 765 770460 - 770450 - g 78 -4 -5.38047 | GATTTAGATAAAAAA TCTT ATG AAGA AATAGCCAATTTATT TERM 766 770642 - 770612 - g 90 -7.1 -5.54907 | TTTATAAAAGAAAAA TACAGCTCATATT ATATA AATATAAGCTATA AAAAAATTCATACAT Cla_0808 770303 - 770902 + | conserved hypothetical lipoprotein Cla_0809 770912 - 773611 + | cytochrome c biogenesis protein TERM 767 773618 - 773599 - T 82 -10.8 -2.64322 | opp_overlap 773599, overlap 773598 773596 ACGGGATTTAAATAC GCCTAGTT TTTA AACTAGGC TTTGCTTTTTTCTAT TERM 768 773599 - 773618 + T 93 -10.8 -4.49041 | opp_overlap 773598 773596 773599 ACGGGATTTAAATAC GCCTAGTT TTTA AACTAGGC TTTGCTTTTTTCTAT Cla_0810 773837 - 773613 - | hypothetical protein lpxD 774789 - 773830 - | UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase ilvH 775253 - 774786 - | acetolactate synthase III, valine-sensitive, small subunit ilvB 776959 - 775250 - | acetolactate synthase III, valine-sensitive, large subunit TERM 769 775386 - 775396 + g 72 -5.4 -4.70626 | TTAGATTCTAAGGCT GCTT TGA AAGC TTTTTGAAATTCTTC TERM 770 776294 - 776274 - G 77 -5.6 -4.87786 | GGAATTTGACAAAAA TGAATTAA TTCTC TTAATTCA TCACTAGCATTAGAA TERM 771 777028 - 777054 + r 72 -7.5 -3.81575 | gap 1, opp_overlap 777030 777044, overlap 777030 ATTATTTTATAAGGA G-AGTTTCTTGA AAAA TCAAGAAACTAC TTGTGCTTTTTTAGC TERM 772 777051 - 777030 - R 79 -10.3 -2.9675 | opp_overlap 777028 777030, overlap 777044 TATTTTATAAGGAGA GTTTCTTGA AAAA TCAAGAAAC TACTTGTGCTTTTTT TERM 773 777030 - 777051 + r 79 -10.3 -2.96842 | opp_overlap 777030 777044, overlap 777028 TATTTTATAAGGAGA GTTTCTTGA AAAA TCAAGAAAC TACTTGTGCTTTTTT oorC 777600 - 777043 - | 2-oxoglutarate:acceptor oxidoreductase, OorC subunit oorB 778442 - 777597 - | 2-oxoglutarate:acceptor oxidoreductase, OorB subunit oorA 779568 - 778444 - | 2-oxoglutarate:acceptor oxidoreductase, OorA subunit oorD 779885 - 779577 - | 2-oxoglutarate:acceptor oxidoreductase, OorD subunit TERM 774 780058 - 780038 - R 87 -11.3 -3.3568 | opp_overlap 780036, overlap 780036 TAACGCAAAGTAACA TTAGGAGTT AAA AACTCCTAA AAATTATTTATAATT mdh 780958 - 780062 - | malate dehydrogenase Cla_0819 783547 - 780977 - | hypothetical protein pabC 783465 - 784418 + | 4-amino-4-deoxychorismate lyase ftsK 787193 - 784419 - | DNA segregation ATPase FtsK/SpoIIIE TERM 775 786605 - 786623 + g 86 -3.2 -5.92399 | CTAATTCTTGATTTT TTAAATCT TCA AGATTGAA TTTTTTATTTTCTTG TERM 776 787233 - 787223 - R 78 -2.6 -5.84011 | overlap 787232 AATAAAAAATAAAAA TATT AGA AATA ATAAAAATAGCTTCT TERM 777 787284 - 787241 - R 93 -6.4 -5.42164 | opp_overlap 787241, overlap 787235 787232 TAGAAATAATAAAAA TAGCTTCTTTTTTTATAA CATATCCT TTATAAAGAAAAAAGCTA TTATATCAAAAATTA Cla_0822 789531 - 787297 - | flagellin family protein TERM 778 789241 - 789257 + g 71 -5.9 -4.5115 | overlap 789242 789249 ATTTCCATCACTTGC TGCTTTT GTT AAAAGCG TTTTAAATTTTTCTA Cla_0824 789967 - 791145 + | site-specific recombinase, phage integrase family Cla_0825 791323 - 791138 - | hypothetical protein Cla_0826 791681 - 791325 - | hypothetical protein Cla_0827 791903 - 791697 - | hypothetical protein Cla_0828 792261 - 791887 - | hypothetical protein Cla_0829 793124 - 792258 - | hypothetical protein Cla_0830 793303 - 793145 - | hypothetical protein Cla_0831 793485 - 793306 - | hypothetical protein TERM 779 793538 - 793524 - R 82 -7.1 -4.75776 | opp_overlap 793524, overlap 793511 AATGGAAGTTAAAAA CCACC ATAAA GGTGG TTACTCAAAATAAAG TERM 780 793574 - 793588 + r 78 -10 -2.73619 | opp_overlap 793574 793562 793578, overlap 793573 TAATATGGCTTATAA GGGAGT TTA ACTCCC ATTTAAACACTACTT TERM 781 793588 - 793574 - R 82 -10 -3.31248 | opp_overlap 793573 793574, overlap 793562 793578 TAATATGGCTTATAA GGGAGT TTA ACTCCC ATTTAAACACTACTT TERM 782 793683 - 793669 - R 77 -7.2 -4.21974 | TGACCATTTAACAAA GCTTTT TAA AAAAGC CCACTTTCCCACCCG TERM 783 793753 - 793726 - R 74 -6.4 -4.38748 | gap 1, overlap 793728 793729 GTGATAAATAAAGAA CACGCTAGCTTGA TCA CCAAGCTAGC-TA TAAGGAAATTCACTT TERM 784 793752 - 793728 - R 81 -9.3 -3.78321 | overlap 793726 793729 GATAAATAAAGAACA CGCTAGCTTGA TCA CCAAGCTAGCT ATAAGGAAATTCACT TERM 785 793751 - 793729 - R 95 -12.8 -2.85366 | overlap 793728 793726 ATAAATAAAGAACAC GCTAGCTTGA TCA CCAAGCTAGC TATAAGGAAATTCAC TERM 786 793795 - 793830 + r 80 -7.8 -4.11692 | gap 1, opp_overlap 793795, overlap 793826 TCAAGCTTTTAAAAA CCTT-TTAAGCACACTT AGA AAATGTGCTTAATGAGG TTTTCAAGCTACCTC TERM 787 793830 - 793795 - R 86 -7.8 -4.59853 | gap 1, opp_overlap 793795 793826 TCAAGCTTTTAAAAA CCT-TTTAAGCACACTT AGA AAATGTGCTTAATGAGG TTTTCAAGCTACCTC Cla_0832 794133 - 793834 - | hypothetical protein TERM 788 793999 - 794011 + g 72 -4.9 -4.86613 | TCTTAAAAGTGCTTT TTCTA CTT TAGAA TTTGTTTTGCTTTTA Cla_0833 794412 - 794134 - | hypothetical protein TERM 789 794537 - 794507 - H 70 -6.3 -4.05446 | overlap 794510 TTTGGTAATTATAAA TCATTTTGACTTG TTTGT CAAGTCAAAATAT AAAAATATTTTAAAA TERM 790 794534 - 794510 - H 79 -10.2 -3.0682 | overlap 794507 GGTAATTATAAATCA TTTTGACTTG TTTGT CAAGTCAAAA TATAAAAATATTTTA Cla_0834 794602 - 794985 + | conserved hypothetical protein, putative transcriptional regulator Cla_0835 794988 - 795293 + | hypothetical protein Cla_0836 795294 - 796673 + | conserved hypothetical protein, putative exonuclease TERM 791 796659 - 796674 + F 78 -3.4 -5.68438 | opp_overlap 796646 796671, overlap 796671 GAGATTATAAATTCA TTTATT ATCG AATAAA TTTTTTATTTGATAA TERM 792 796813 - 796782 - f 86 -10.5 -3.43654 | opp_overlap 796784 796787, overlap 796787 TAAATATAGCTATAA TATAATTACCAAA ATTTTA TTTGGTAATTATA TTAAGGGGTAAAATA TERM 793 796784 - 796811 + F 71 -8.7 -3.03124 | opp_overlap 796782 796787, overlap 796787 AATATAGCTATAATA TAATTACCAAA ATTTTA TTTGGTAATTA TATTAAGGGGTAAAA TERM 794 797489 - 797479 - g 88 -4 -5.72616 | ACTTATATAAAAAAA TCTT TTA AAGA ACTTATAAATGATAT TERM 795 797784 - 797770 - g 93 -4.2 -6.23317 | ACAAAAACAAAAAAA TGGGTA AGT TTCCCA GATGACACATACGAA Cla_0837 796828 - 797871 + | conserved hypothetical protein (DUF450 domain protein) TERM 796 797880 - 797859 - f 79 -8.9 -3.55814 | opp_overlap 797862 797864, overlap 797851 797873 CATCAAGTCATATAA TGATAGAAA GTAA TTTCTATCA TTAAGATAAAATACA TERM 797 798342 - 798328 - g 75 -5.8 -4.79949 | opp_overlap 798307 798328 798327 798330 TTTTTAAAAAAAGAA GATTTT AAA AAAATC ATTGTATGTCTTGAT Cla_0838 797896 - 799719 + | conserved hypothetical protein, KAP family Cla_0839 799969 - 799700 - | hypothetical protein TERM 798 799744 - 799774 + gT 85 -8.5 -4.43864 | opp_overlap 799762, overlap 799757 TATTGATCTCACATT GCTTATAGTGA TAAAAAAGC TCACTATAAGC TTTTAATATATCTTT TERM 799 799774 - 799762 - GT 78 -4.1 -5.29782 | opp_overlap 799744 799757 TATAGTGATAAAAAA GCTCA CTA TAAGC TTTTAATATATCTTT Cla_0840 800225 - 799836 - | hypothetical protein TERM 800 800404 - 800421 + r 70 -7.7 -3.54951 | opp_overlap 800384 GGCTTATTAACCTTG TCCCCTT TTTT AGGGGGA TTATGTGGTAACCTA Cla_0841 800922 - 800455 - | hypothetical protein Cla_0842 802221 - 800923 - | hypothetical protein TERM 801 801312 - 801280 - G 80 -9.9 -3.36671 | opp_overlap 801279 ATTTGAATTCCATAA GCTACAAGTTGTCCA AGA TTGACCACTTGCAGC AGTATTGTCAAAATT Cla_0843 802593 - 802222 - | conserved hypothetical protein (DUF1353 domain protein) Cla_0844 803071 - 802574 - | hypothetical protein Cla_0845 803708 - 803073 - | hypothetical protein TERM 802 803579 - 803567 - G 74 -7.7 -3.71672 | CTCTAGCAAAACCAA GAGCT TTA AGCTC ATCATCATTTAATTT Cla_0846 804167 - 803718 - | hypothetical protein Cla_0847 805761 - 804169 - | hypothetical protein TERM 803 804240 - 804220 - G 74 -6.9 -4.25754 | GCAAAAATAAGCAAA GGTCTCAGT TCC ACTAAAACC ACTTTGTGCTATTCT TERM 804 805466 - 805485 + g 72 -8 -3.66178 | TGTGCTGTTGATTTT TTAAACCA TACT TGGTTTAA TTTAGGATTAACCGG TERM 805 805595 - 805608 + g 76 -6.7 -4.4836 | opp_overlap 805586 805595, overlap 805581 805579 CTTAAAGCTTCATAA GAAGC TATA GCTTC TTTTACCTTTTCTTC Cla_0848 806372 - 805761 - | hypothetical protein Cla_0849 806685 - 806359 - | hypothetical protein Cla_0850 807132 - 806695 - | hypothetical protein TERM 806 807081 - 807098 + g 70 -3.5 -5.05782 | GAAATTCTCTTAATT CTTTTAT GTTT ATAAGAG TTTTTTCAGGTGCAT Cla_0851 807371 - 807129 - | hypothetical protein Cla_0852 808542 - 807382 - | major capsid protein, HK97 family Cla_0853 809105 - 808554 - | hypothetical protein TERM 807 808600 - 808613 + g 70 -5.3 -4.67478 | opp_overlap 808574, overlap 808574 808598 CGTTCTCTTGCTTGA GCTAA AGCT TTAGC TTCTTTTTGTGTTTG Cla_0854 810044 - 809175 - | hypothetical protein Cla_0855 815530 - 810041 - | hypothetical protein TERM 808 810333 - 810352 + g 78 -4.2 -5.4756 | TGTGTTACTATTCCA CCATCTGC AAAA GCAAGTGG TTTTTTATTAGGGTT TERM 809 813177 - 813187 + g 74 -5.4 -5.00884 | ATTTCTTTCAAAGCC CAAG CTT CTTG TTTTTTACCAACACT TERM 810 813448 - 813463 + g 72 -2.6 -5.49579 | gap 1, overlap 813438 813450 GAGTATGCTTTTCTT G-AGCAA GTT TTGCTTC TTTTATTTTTTCTAA TERM 811 813450 - 813460 + g 72 -5.4 -4.75934 | overlap 813438 813448 GTATGCTTTTCTTGA GCAA GTT TTGC TTCTTTTATTTTTTC TERM 812 814399 - 814413 + g 81 -5.8 -5.32599 | overlap 814405 CGCTTAATCTATCTA TATCTT TAA AAGATA TTTTTATATTTTCTA TERM 813 815361 - 815375 + g 74 -8.6 -3.34534 | TAACCATGATAGCTT TGCACA AAA TGTGCA TTCATATCTAGTATC Cla_0856 815895 - 815554 - | hypothetical protein Cla_0857 816120 - 815902 - | hypothetical protein Cla_0858 816563 - 816201 - | hypothetical protein Cla_0859 817534 - 816560 - | hypothetical protein TERM 814 816634 - 816650 + g 70 -5.2 -4.57921 | CTGAAGCTACTCCGC TACTTG AATCA CAAGTA TATTTTTTTCTTATA Cla_0860 817948 - 817598 - | hypothetical protein Cla_0861 818473 - 817949 - | phage protein, HK97 gp10 family Cla_0862 819630 - 818461 - | phage portal protein, HK97 family TERM 815 818684 - 818707 + g 70 -8.2 -3.16822 | TAATATTTTCCCCAT TCGCTTTTAG TAAG CAAAAAGCGA TTAAATGCTTGTTCT TERM 816 819432 - 819448 + g 90 -3.7 -6.28401 | opp_overlap 819425 ACAAAGGATGATTAG TGGCT AATACAG AGCCA TTTTTTTCTTTTTTG TERM 817 819641 - 819665 + r 74 -8.1 -3.57561 | opp_overlap 819654 AGCATTCAAAGCCTC GTTTTTTTAAG TAT TTTAAAAAAAC TTTGAGGCGTTAAAA Cla_0863 820440 - 819709 - | uncharacterized phage-encoded protein TERM 818 820258 - 820287 + g 71 -8.7 -2.75769 | opp_overlap 820258, overlap 820257 820266 CGTGCTATCAGTATA TTTACTCGGCTCA AAAT TGAGCTTAGTAAA ATTATCCTTTGGAAA TERM 819 820398 - 820364 - G 81 -9.4 -3.57792 | overlap 820367 TCAGCCACGCTTAAA GAAGTGCAAGTAAC TTGGTCG GCTCCTTGCACTTC CAACTCTACATTTTG TERM 820 820590 - 820574 - H 74 -6.5 -4.49756 | opp_overlap 820574 TTTCAAAGATGAAAA CCCCC TCGCACT GGGGG TTACTTTAGCTTGTT Cla_0864 820831 - 821631 + | hypothetical protein TERM 821 821629 - 821659 + F 72 -7.9 -3.34962 | gap 1, opp_overlap 821628, overlap 821632 TGTGATATAAAACTT TAG-CTTTTTCTAA TTTT TTAGAAAAAGTCTA TTATACCATATCAGA TERM 822 821632 - 821655 + F 78 -9.8 -3.18386 | opp_overlap 821628, overlap 821629 GATATAAAACTTTAG CTTTTTCTAA TTTT TTAGAAAAAG TCTATTATACCATAT Cla_0865 821817 - 821993 + | hypothetical protein Cla_0866 821941 - 822408 + | hypothetical protein Cla_0867 824111 - 822480 - | phage terminase, large subunit, putative TERM 823 823390 - 823403 + g 73 -3.9 -5.24989 | CAAGCAACCTTTTTA CAATA ATCA TATTG TTTTTTCATCTCTGA TERM 824 824012 - 824047 + g 74 -6.4 -4.50259 | opp_overlap 824020 824023, overlap 824019 CTATTTTTTCATCTA TATAAAATGGAGAATT TTGA AATTCTTCGTTTTTTA TTTTGATATATTTTT TERM 825 824019 - 824040 + g 91 -4.5 -5.83211 | opp_overlap 824020 824023, overlap 824012 TTCATCTATATAAAA TGGAGAATT TTGA AATTCTTCG TTTTTTATTTTGATA Cla_0868 824739 - 824104 - | phage terminase, small subunit, putative Cla_0869 825333 - 824983 - | HNH endonuclease domain protein Cla_0870 825608 - 825330 - | hypothetical protein TERM 826 826359 - 826383 + r 70 -7.4 -3.6284 | opp_overlap 826358 826359 826361 CTTTAATAAAAAATT GATTATTTTT TATAT AAAAATAATC TTTAAGATGATGATT TERM 827 826722 - 826747 + r 79 -9 -3.51232 | opp_overlap 826715 826730, overlap 826718 GTATTAAGGGTGCAA CGCCAAAGGG GCGCAA CCCTTTAGCG TTAATTTACCACCCA TERM 828 826849 - 826865 + r 82 -9.4 -3.62275 | overlap 826863 GGCTTATTGAGTATC CCCTGC TTTTT GCAGGG TTTAGGATAATCCCT TERM 829 826976 - 826989 + r 77 -5.3 -5.0095 | TTGTTAAATTCTCAA GATTG TTTT CAATC TTTTCTTGTATTTTT Cla_0871 827611 - 827360 - | hypothetical protein TERM 830 827664 - 827687 + H 90 -11.8 -3.14931 | opp_overlap 827657 827656 827666, overlap 827657 827685 TTTCAAAGGGTGGAA CACCAAAGGT GGCC GCCTTTGGTG TTAATCAACACTCAG TERM 831 827768 - 827787 + H 72 -7.2 -3.71649 | TTTGTATAATTATAG TCAAGGCT TATT AGCTTTGA TTTCCCCTTTAAAAA Cla_0872 828146 - 829066 + | conserved hypothetical protein, putative transcriptional regulator TERM 832 829047 - 829082 + T 70 -5.6 -4.71708 | opp_overlap 829056 829059, overlap 829052 829056 TAGTTAAGCAATACC TTGATCAAATAAGCAA ATGA TTGCTTATTTGTTTGG TTTTAATTTATTGTT TERM 833 829052 - 829077 + T 100 -12.1 -4.29472 | opp_overlap 829056 829059, overlap 829047 829056 AAGCAATACCTTGAT CAAATAAGCAA ATGA TTGCTTATTTG TTTGGTTTTAATTTA TERM 834 829056 - 829073 + T 78 -7.1 -4.67692 | opp_overlap 829056 829059, overlap 829052 829047 AATACCTTGATCAAA TAAGCAA ATGA TTGCTTA TTTGTTTGGTTTTAA Cla_0873 830465 - 829071 - | hypothetical protein TERM 835 829811 - 829821 + g 70 -4 -4.88295 | TTTTAAATTTTTTAT CAAT TTC ATTG TTTTTAACTTTATTT Cla_0874 830571 - 831119 + | hypothetical protein TERM 836 831190 - 831159 - g 70 -5.4 -4.52747 | opp_overlap 831159 831175, overlap 831156 CAAAACATAAAAGAA TTTATCAAAATCTT GTGC AAAATTTTGCTAAA TTTAACATCGCTTTT Cla_0875 831116 - 831883 + | conserved hypothetical protein, putative peptidyl-arginine deiminase Cla_0876 831908 - 832528 + | hypothetical protein TERM 837 832535 - 832559 + F 90 -7.3 -5.04733 | opp_overlap 832538 CCCAAATAATTCTCA TAACTAGAC AATTAAA GTCTAGTTA TTTTGTTTATAATTG TERM 838 833399 - 833389 - g 72 -4 -5.1675 | TTATGCACTAAAAAA GATT ATT AATC CCAAAAAACAAATGA Cla_0877 832604 - 834526 + | conserved hypothetical protein, putative ATPase, AAA family TERM 839 834567 - 834581 + G 74 -7.2 -3.87551 | opp_overlap 834567 834569 CTTCAAGGAACATTA CACAAA AGC TTTGTG TTTGGATTTAATGAT Cla_0878 834540 - 835232 + | hypothetical protein TERM 840 835218 - 835247 + T 74 -7.3 -3.918 | opp_overlap 835220, overlap 835220 AAAATTTCTTTTACT AAGCTACTAAAAT GATT GTTTTAGTAGCTC TTTGATCCTTTCTAT TERM 841 835220 - 835245 + T 84 -9.9 -3.53511 | opp_overlap 835220, overlap 835218 AATTTCTTTTACTAA GCTACTAAAAT GATT GTTTTAGTAGC TCTTTGATCCTTTCT TERM 842 835245 - 835220 - T 75 -9.2 -3.14463 | opp_overlap 835220 835218 AATTTCTTTTACTAA GCTACTAAAA TGATTG TTTTAGTAGC TCTTTGATCCTTTCT Cla_0879 836603 - 835224 - | hypothetical protein TERM 843 836407 - 836428 + gT 77 -4.5 -5.19212 | opp_overlap 836407 AATGAAATGATAGGA TTTTTAGCA TTTT TGCTTAAAA TTTTTTCATCATCAT TERM 844 836479 - 836516 + gT 72 -4.6 -4.90217 | gap 2, opp_overlap 836479 CCATTTTTTATAAAA TCTTCAA-AATACAA-AT CAAA ATCTTGTATTCTTGAAGA TTTTTGATCTATTTC Cla_0880 838461 - 836545 - | conserved hypothetical protein, putative ATPase, AAA family TERM 845 836636 - 836625 - GH 71 -3 -5.18726 | overlap 836619 TTTCTATAACAAAAA GTTT TTTT AAAC CATCCAAGTGTTTTT TERM 846 837898 - 837883 - GH 77 -7.6 -4.18259 | overlap 837881 AAATTGTAAAAAATA TGCTAG TTCT CTAGCA GTAGCACTCATACCT Cla_0881 838658 - 839221 + | hypothetical protein TERM 847 839340 - 839301 - f 72 -3.2 -5.41746 | gap 1, overlap 839304 839306 839307 AACCTTTGAAAAAAA TAATACTCTAGCCTATTTT AAT AAAATAGACTAAAAT-TCA AATAAAACAACGAAG TERM 848 839338 - 839304 - f 74 -5.2 -4.79949 | overlap 839301 839306 839307 CTTTGAAAAAAATAA TACTCTAGCCTATTTT AAT AAAATAGACTAAAATT CAAATAAAACAACGA TERM 849 839336 - 839306 - f 79 -7.8 -4.0057 | overlap 839304 839301 839307 TTGAAAAAAATAATA CTCTAGCCTATTTT AAT AAAATAGACTAAAA TTCAAATAAAACAAC TERM 850 839335 - 839307 - f 74 -9.1 -2.98715 | overlap 839306 839304 839301 TGAAAAAAATAATAC TCTAGCCTATTTT AAT AAAATAGACTAAA ATTCAAATAAAACAA TERM 851 840770 - 840757 - f 95 -6.7 -5.40279 | opp_overlap 840756 840757 GAAAACAAAAGAAAA GCTTG CCGC CAAGC CTTGCTAGAATACTG Cla_0883 840976 - 841521 + | hypothetical protein TERM 852 841804 - 841836 + T 77 -9.3 -3.45031 | opp_overlap 841804 841805, overlap 841799 ATAAAAATTTTAAAA GCTTAATCCATAGCT TAA AGCTATGGATTAAAA TTCGATTTTTAAAAC TERM 853 841836 - 841804 - T 100 -11.5 -4.32233 | opp_overlap 841804 841799, overlap 841805 ATAAAAATTTTAAAA GCTTAATCCATAGCT TAA AGCTATGGATTAAAA TTCGATTTTTAAAAC TERM 854 841835 - 841805 - T 100 -15 -3.17713 | opp_overlap 841804 841799, overlap 841804 TAAAAATTTTAAAAG CTTAATCCATAGCT TAA AGCTATGGATTAAA ATTCGATTTTTAAAA Cla_0884 842163 - 841831 - | hypothetical protein Cla_0885 843319 - 842150 - | hypothetical protein TERM 855 842747 - 842763 + g 78 -6.7 -4.59342 | CTTTTCTTGAGATTT TTTTAAC CAA GTTAAAA TTTCTTTCTCATAAG TERM 856 843226 - 843214 - G 70 -6.3 -4.10161 | opp_overlap 843213 843214 CATGAGCGGGCAAAA CCTTT AAT AAAGG ATTGTAGTCATTTTT Cla_0886 843672 - 843322 - | hypothetical protein Cla_0887 845229 - 843682 - | hypothetical protein TERM 857 845640 - 845620 - R 100 -12.7 -4.33165 | opp_overlap 845620 TTAAATTTATGAAAA GATAAAGCC TTA GGCTTTATC TTAACTGCTTTCAAA TERM 858 845620 - 845640 + r 100 -12.7 -3.1634 | opp_overlap 845620 TTAAATTTATGAAAA GATAAAGCC TTA GGCTTTATC TTAACTGCTTTCAAA Cla_0888 847770 - 845641 - | conserved hypothetical protein (DUF262 domain protein) TERM 859 847014 - 847053 + g 85 -7.4 -5.00765 | opp_overlap 847021 TGCTTTCATCTTCAT CATTAAATTTAGAAAGCA ATCT TGCTTTTAAAATTTCATG TTTTTCTAGTTGCTT Cla_0889 849137 - 847782 - | conserved hypothetical protein (DUF262 domain protein) Cla_0890 849992 - 849165 - | NAD-dependent protein deacetylase (SIR2 family), putative TERM 860 849477 - 849463 - G 73 -8.6 -3.20955 | overlap 849461 TTAAACATTAAGATA TTTGGC CTT GCCAAA CCTTGACATCTAGGA Cla_0891 850430 - 850002 - | hypothetical protein TERM 861 850396 - 850363 - G 81 -8.4 -4.11216 | gap 1, opp_overlap 850346 850345 850364 850367, overlap 850345 850365 TTTGGAGTGTTAAAA CACATCCAAAAAGAT TTTTT ACCTTTTTGGATG-G TATAATCTTGAATAG TERM 862 850395 - 850365 - G 95 -12.1 -3.65542 | opp_overlap 850346 850345 850364 850367, overlap 850345 850363 TGGAGTGTTAAAACA CATCCAAAAAGAT TTTTT ACCTTTTTGGATG GTATAATCTTGAATA dnaE 854091 - 850498 - | DNA polymerase III, alpha chain TERM 863 853419 - 853430 + g 71 -5.8 -4.43208 | opp_overlap 853403 ACATAAATACTTCAT GAGC AGCC GCTC TTTCTTTAAAAGTGT TERM 864 853496 - 853514 + g 71 -9 -2.87003 | AGCTCTTTAGCAAGT TTGATGAT AGA ATCATCAA TAAATTTTTGATCAT TERM 865 853619 - 853629 + g 70 -4 -4.93454 | GCACCCTCATAACCC TTTG CGC CAAA TTTTATATTTCTTTC TERM 866 853991 - 854001 + g 74 -6.8 -4.28049 | overlap 853999 ATAGCAACACTTGTT GCAC CTT GTGC TTTTAGCGTTTTAGC Cla_0893 854428 - 854177 - | hypothetical protein TERM 867 854258 - 854244 - G 71 -8.6 -2.78869 | overlap 854243 ATTACAAACCACAAG CTGCAA GGG TTGCAG AAGAAATACAAAATG TERM 868 854437 - 854460 + r 95 -9.7 -4.63486 | opp_overlap 854436 854435 854441, overlap 854441 GAAACAAATATAAGC TAAACCCTC ATTAGC GAGGGTTTA TTTTGTTAAAGGAAT TERM 869 854441 - 854456 + r 77 -6.1 -4.87892 | opp_overlap 854441 854436 854435, overlap 854437 CAAATATAAGCTAAA CCCTC ATTAGC GAGGG TTTATTTTGTTAAAG TERM 870 854456 - 854441 - R 71 -6.8 -3.87116 | opp_overlap 854437 854441, overlap 854436 854435 CAAATATAAGCTAAA CCCTCA TTAG CGAGGG TTTATTTTGTTAAAG thiJ 855024 - 854458 - | 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein Cla_0895 855907 - 855035 - | hydrolase, carbon-nitrogen family TERM 871 855548 - 855536 - GR 70 -3.5 -5.13722 | TGGAGTAAAATAAAA TTTTT CAT AAAAA CAAGGATCATCAGGA Cla_0896 856790 - 855876 - | cation efflux family protein Cla_0897 857764 - 856787 - | peptidyl-arginine deiminase family protein Cla_0898 858102 - 857821 - | hypothetical protein TERM 872 858009 - 858019 + g 78 -4 -5.4148 | AACATGGGCATTTGT GAAA AAA TTTC TTTTTTGCTTCTTTG Cla_0899 858701 - 858102 - | conserved hypothetical protein, putative hydrolase (metallo-beta-lactamase family) TERM 873 858551 - 858533 - G 79 -8.2 -4.00038 | opp_overlap 858532 TAGCATTATCATAAA CATGATCA TAA TGACCATG GGTATTTAAAATAGC TERM 874 859217 - 859237 + G 78 -6.9 -4.67904 | CTTTTAATCCTTTAG CTACACTTT ATA AAAGTGAAG TTTTTGAGCTTGCTA nadE 858763 - 859503 + | NH(3)-dependent NAD+ synthetase lpxK 859490 - 860428 + | tetraacyldisaccharide 4'-kinase TERM 875 861772 - 861755 - gf 95 -7.1 -5.2853 | CACTCAAAAACAAAA TCAAGTT TGCA AACTTGA AAATCTAAAACAAAC thrC 860403 - 861812 + | threonine synthase kdsB 861809 - 862534 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 876 862720 - 862695 - g 89 -4.1 -5.95539 | TGCTAAAGAAAAAAA CTATGATTTAA AAAT TCAAAACATAG CTTGGGATGGACTTA TERM 877 863251 - 863239 - g 71 -4.9 -4.788 | AAACTAAGTCAAAAA TATCT CAA AGATA TGCAAGAAGTTTTCA glnH 862531 - 863295 + | glutamine-binding periplasmic protein TERM 878 863281 - 863304 + T 95 -11.2 -4.18763 | opp_overlap 863279 863303 AAAGAACAAAAGCTT GAGTTTTTCT TCTA AGAAAAACTC TTTTCAAGCTTTCTT glnP 864074 - 863292 - | amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family TERM 879 863365 - 863353 - G 72 -6.3 -4.24432 | AAAGTTAAAACCAAA TAGCA AAG TGCTA AAGGGATATAAATTT TERM 880 864676 - 864654 - g 81 -6.4 -5.10665 | ACTTAATAAACAAAA TGGAATTTAT ACT ATAAAATCCA CTAAAGATCAATTTA TERM 881 865195 - 865218 + G 70 -5.4 -4.57341 | GCAGGAGCTTTGCTT TACATTACTA ATAG TGGTGATGTA TTTTTAGGAGGACTT dsbD 864256 - 865947 + | thiol:disulfide interchange protein DsbD TERM 882 866543 - 866518 - g 95 -8.4 -5.47914 | overlap 866511 866509 AAAAATTAGAAAAAA TTTCCACCCT AGCAAA AGGATGGAAA GAGAGTATCCAGGCT Cla_0907 865944 - 866600 + | conserved hypothetical protein (MOSC domain protein) ndh 867768 - 866593 - | NADH dehydrogenase TERM 883 867813 - 867823 + H 71 -2.6 -5.47159 | AATAAAAATTTGGCA TAAT GGT ATTA TTTTTTATCTTAAAA Cla_0909 867871 - 869235 + | sodium-dependent transporter (SNF family) TERM 884 869260 - 869300 + T 91 -9.1 -4.67011 | opp_overlap 869259, overlap 869261 869283 ATAGCGCTTTAACAT GCTTATATTTCCTTCAAGG CCT CCTTGGTGGATATATAAGA TTTTTCCATCAAGTT TERM 885 869261 - 869299 + T 100 -12.6 -3.39483 | opp_overlap 869259, overlap 869260 869283 TAGCGCTTTAACATG CTTATATTTCCTTCAAGG CCT CCTTGGTGGATATATAAG ATTTTTCCATCAAGT TERM 886 870000 - 869979 - T 91 -11.7 -3.53012 | opp_overlap 869979 869982, overlap 869982 TTTGTTTTTTTCAAA TAAGGCTAG TTTT CTAGCCTTA TTTCCATTAATATAG TERM 887 869979 - 870000 + T 95 -11.7 -3.79787 | opp_overlap 869979 869982, overlap 869982 TTTGTTTTTTTCAAA TAAGGCTAG TTTT CTAGCCTTA TTTCCATTAATATAG TERM 888 869997 - 869982 - T 83 -9 -3.90744 | opp_overlap 869982 869979, overlap 869979 GTTTTTTTCAAATAA GGCTAG TTTT CTAGCC TTATTTCCATTAATA TERM 889 869982 - 869997 + T 84 -9 -4.02051 | opp_overlap 869979 869982, overlap 869979 GTTTTTTTCAAATAA GGCTAG TTTT CTAGCC TTATTTCCATTAATA Cla_0911 871026 - 870076 - | chemotaxis protein MotB, putative Cla_0912 872344 - 871013 - | hypothetical protein TERM 890 872114 - 872104 - G 70 -5.4 -4.56597 | TTTGTTGCTCAAAAA TGCT TGA AGCA TAATCAGCACTATGT TERM 891 872402 - 872423 + r 90 -10.3 -4.0641 | opp_overlap 872354 872353 872398 872402 TCACAGGAAAATCAA CTAAGAGTT ATAA AACTCTTAG TTTCTATCGATACAA TERM 892 872423 - 872402 - R 85 -10.3 -3.73858 | opp_overlap 872402, overlap 872354 872353 872398 TCACAGGAAAATCAA CTAAGAGTT ATAA AACTCTTAG TTTCTATCGATACAA fba 873484 - 872420 - | fructose-bisphosphate aldolase peb4 874299 - 873484 - | major antigenic peptide PEB-cell binding factor TERM 893 873711 - 873701 - G 82 -6.8 -4.96848 | overlap 873702 TTTTTCATAGAAAAA GCTG CAT CAGC AAATGGTTTTACCAT nth 874379 - 875005 + | endonuclease III TERM 894 875028 - 874996 - T 77 -4.9 -5.22289 | opp_overlap 874998 875001, overlap 874997 875001 GAGTAAAGATAAAAA GTTAATCTAGCACTA AAT TAGTGCTAGATGATT TTAATGAAAAAATGG TERM 895 875027 - 874997 - T 79 -8.4 -3.71747 | opp_overlap 874998 875001, overlap 874996 875001 AGTAAAGATAAAAAG TTAATCTAGCACTA AAT TAGTGCTAGATGAT TTTAATGAAAAAATG TERM 896 874998 - 875026 + T 100 -11.9 -4.25283 | opp_overlap 874997 874996 875001, overlap 875001 GTAAAGATAAAAAGT TAATCTAGCACTA AAT TAGTGCTAGATGA TTTTAATGAAAAAAT TERM 897 875023 - 875001 - T 100 -13.6 -3.51588 | opp_overlap 875001 874998, overlap 874997 874996 AAGATAAAAAGTTAA TCTAGCACTA AAT TAGTGCTAGA TGATTTTAATGAAAA TERM 898 875001 - 875023 + T 100 -13.6 -3.13504 | opp_overlap 874997 874996 875001, overlap 874998 AAGATAAAAAGTTAA TCTAGCACTA AAT TAGTGCTAGA TGATTTTAATGAAAA gltS 876237 - 875029 - | sodium/glutamate symport carrier protein Cla_0917 877693 - 876353 - | outer membrane efflux protein TERM 899 877310 - 877286 - G 73 -5.7 -4.56597 | opp_overlap 877286 877285 TGCTTTTGCTAAAAA TTCAGAACTAG CAA CTTGATCTGAA ATTTTTCCATATATA Cla_0918 879626 - 877695 - | ABC transporter, ATP-binding protein Cla_0919 880756 - 879623 - | AcrA/AcrE family efflux protein rdxA 880884 - 881492 + | nitroreductase TERM 900 881588 - 881600 + G 73 -5.5 -4.60041 | TTTCTTAAAGATTTT TGGCG TAT TGCCA TTTTTAACAGTAGCT TERM 901 884253 - 884240 - g 73 -3.9 -5.22312 | opp_overlap 884240 884246 AGCTATAGTAAAAAA TAATG TTAG CATTA TGTGTGCTACTTCTA aas 881562 - 885074 + | 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase TERM 902 885097 - 885071 - f 100 -14 -2.64651 | opp_overlap 885071 885077 885094, overlap 885077 AATCTTGCAAACTCA TTAAAATAAGCC TTT GGCTTATTTTAA TTCTAAATTAATCTT TERM 903 885071 - 885097 + F 100 -14 -3.44792 | opp_overlap 885071 885077, overlap 885077 885094 AATCTTGCAAACTCA TTAAAATAAGCC TTT GGCTTATTTTAA TTCTAAATTAATCTT TERM 904 885091 - 885077 - f 85 -8.6 -4.33165 | opp_overlap 885077 885071, overlap 885071 GCAAACTCATTAAAA TAAGCC TTT GGCTTA TTTTAATTCTAAATT TERM 905 885077 - 885091 + F 85 -8.6 -4.50661 | opp_overlap 885071 885077, overlap 885071 GCAAACTCATTAAAA TAAGCC TTT GGCTTA TTTTAATTCTAAATT Cla_0922 885339 - 886283 + | conserved hypothetical protein, putative pyridine nucleotide-disulphide oxidoreductase TERM 906 886298 - 886334 + G 72 -4.5 -4.93595 | opp_overlap 886304, overlap 886299 886304 AAACTCTTTCAATAC TCAAAAGGCTATCGCTA TAA TAACGATAGTCTTTTAC TTTTTGACTTTTTAT TERM 907 886299 - 886333 + G 71 -8 -3.53717 | opp_overlap 886304, overlap 886298 886304 AACTCTTTCAATACT CAAAAGGCTATCGCTA TAA TAACGATAGTCTTTTA CTTTTTGACTTTTTA TERM 908 886328 - 886304 - g 79 -7.9 -4.28254 | opp_overlap 886304 886299 886298 TTTCAATACTCAAAA GGCTATCGCTA TAA TAACGATAGTC TTTTACTTTTTGACT TERM 909 886304 - 886328 + G 85 -7.9 -4.78661 | opp_overlap 886304, overlap 886299 886298 TTTCAATACTCAAAA GGCTATCGCTA TAA TAACGATAGTC TTTTACTTTTTGACT TERM 910 886520 - 886508 - g 80 -6.3 -4.96996 | GCCAAAGAAAATAAA CTTGA AAT TCAAG GCATTTGTGAAGACT Cla_0923 886277 - 886969 + | conserved hypothetical protein, possible methylase Cla_0924 886962 - 887330 + | conserved hypothetical protein (UPF0153 domain protein) Cla_0925 887306 - 888541 + | conserved hypothetical protein, putative ATP-dependent nuclease TERM 911 889007 - 889024 + G 90 -4.9 -5.7946 | opp_overlap 889003 889002 ATCTTAATAACGCTA TTTTAGC AGGA GCTAGAA TTTTTTTATTGGAAG Cla_0926 888526 - 889128 + | conserved hypothetical protein, putative indole-3-glycerol phosphate synthase TERM 912 889359 - 889375 + G 79 -7.3 -4.4727 | opp_overlap 889359 TTAAGTGATGATACA TGGCTAG AAA TTAGCCA TTTTGTGCGTATTGG Cla_0927 889128 - 889616 + | HIT family hydrolase Cla_0928 889609 - 890592 + | conserved hypothetical protein, predicted ATP/GTP binding protein TERM 913 890596 - 890569 - T 100 -8.6 -5.17576 | opp_overlap 890571, overlap 890571 890595 GATGAAGCTAAAAAA CATCTTATGAGT TTAA ACTCATAAGATT GTATTTACAAAGATA TERM 914 890571 - 890594 + T 91 -11.2 -3.81488 | opp_overlap 890569 890571 TGAAGCTAAAAAACA TCTTATGAGT TTAA ACTCATAAGA TTGTATTTACAAAGA TERM 915 890594 - 890571 - T 95 -11.2 -4.20888 | opp_overlap 890571, overlap 890569 TGAAGCTAAAAAACA TCTTATGAGT TTAA ACTCATAAGA TTGTATTTACAAAGA pitB 892107 - 890587 - | putative phosphate-transport permease PitB pdxA 893254 - 892154 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 916 892430 - 892462 + g 80 -6.4 -4.855 | opp_overlap 892429 ATCAGCCACCAAAGG CTCGCTTAAAAAGA TATTT TCTTTATAAGAGAG TTCTTTTTCTTTTTG TERM 917 892541 - 892556 + g 83 -3.2 -5.74086 | overlap 892542 TTTTAAAAATACATT TGCCAT TTTT ATGGCC TTTTTTATTTCATTT TERM 918 892542 - 892555 + g 71 -6.7 -4.00791 | overlap 892541 TTTAAAAATACATTT GCCAT TTTT ATGGC CTTTTTTATTTCATT pdxJ 894018 - 893251 - | pyridoxal phosphate biosynthetic protein J Cla_0932 894074 - 895039 + | Ppx/GppA phosphatase family superfamily Cla_0933 895050 - 895493 + | conserved hypothetical protein, GatB/YqeY family Cla_0934 895490 - 896143 + | DNA/RNA non-specific endonuclease TERM 919 896172 - 896147 - T 93 -9.1 -4.76041 | opp_overlap 896144 896148, overlap 896148 TATATTGATTAAAAA TGCTAGAAGTT TTAT AACTTCTAGCT TAGTTTATTCTACTT TERM 920 896171 - 896148 - T 100 -12.6 -3.44902 | opp_overlap 896148 896144, overlap 896147 ATATTGATTAAAAAT GCTAGAAGTT TTAT AACTTCTAGC TTAGTTTATTCTACT TERM 921 896148 - 896171 + T 100 -12.6 -3.73387 | opp_overlap 896147 896148, overlap 896144 ATATTGATTAAAAAT GCTAGAAGTT TTAT AACTTCTAGC TTAGTTTATTCTACT dnaK 898045 - 896177 - | chaperone and heat shock protein 70 TERM 922 897240 - 897250 + g 76 -5.4 -5.15117 | TTAGTTTCATTTGCT GAAC TGA GTTC TTTTTTAGCATTTTC TERM 923 897683 - 897705 + g 72 -6.4 -4.32579 | AGCATCTTCTTTTAA TTTCATCAAA ACT TTTGCTGAAA TTTCTTGTGGAGTAT grpE 898576 - 898067 - | co-chaperone protein GrpE TERM 924 898401 - 898411 + g 70 -4 -4.85195 | GCATAAATAGTTGCT GAAA TTT TTTC TTTTTCCATTCTTTT hrcA 899355 - 898573 - | heat-inducible transcription repressor TERM 925 898748 - 898804 + g 95 -11.9 -3.40299 | opp_overlap 898753 898758, overlap 898749 898751 898758 TAAAATCCAATTTGA GGAGATAAAAGCTTAGCAAATTCATCG TTT TGATAAATTTGATAAGCTTTTTTCTCA TTATACCTATAATAA TERM 926 898749 - 898803 + g 100 -15.4 -2.63858 | opp_overlap 898753 898758, overlap 898748 898751 898758 AAAATCCAATTTGAG GAGATAAAAGCTTAGCAAATTCATCG TTT TGATAAATTTGATAAGCTTTTTTCTC ATTATACCTATAATA TERM 927 898751 - 898801 + g 100 -12.2 -2.85712 | opp_overlap 898753 898758, overlap 898749 898748 898758 AATCCAATTTGAGGA GATAAAAGCTTAGCAAATTCATCG TTT TGATAAATTTGATAAGCTTTTTTC TCATTATACCTATAA TERM 928 898799 - 898753 - G 78 -10.5 -2.80994 | opp_overlap 898751 898749 898748 898758, overlap 898758 TCCAATTTGAGGAGA TAAAAGCTTAGCAAATTCATC GTTTT GATAAATTTGATAAGCTTTTT TCTCATTATACCTAT TERM 929 898794 - 898758 - G 100 -10.4 -4.57353 | opp_overlap 898751 898749 898748 898758, overlap 898753 TTTGAGGAGATAAAA GCTTAGCAAATTCATC GTTTT GATAAATTTGATAAGC TTTTTTCTCATTATA TERM 930 898758 - 898794 + g 100 -8.9 -5.39755 | opp_overlap 898758 898753, overlap 898751 898749 898748 TTTGAGGAGATAAAA GCTTAGCAAATTCATCG TTT TGATAAATTTGATAAGC TTTTTTCTCATTATA TERM 931 899404 - 899441 + r 89 -9.5 -4.44608 | gap 1, opp_overlap 899381 899413, overlap 899402 899404 899405 TAATATTTTCAAGTG CT-GACATTATTATACAA CTT TAGTATAATAATGTCAAG TTATTTTTAAATAAA TERM 932 899404 - 899440 + r 78 -9.7 -3.26042 | opp_overlap 899381 899413, overlap 899404 899402 899405 TAATATTTTCAAGTG CTGACATTATTATACAA CTT TAGTATAATAATGTCAA GTTATTTTTAAATAA TERM 933 899405 - 899439 + r 100 -13.2 -2.54902 | opp_overlap 899381 899413, overlap 899404 899404 899402 AATATTTTCAAGTGC TGACATTATTATACAA CTT TAGTATAATAATGTCA AGTTATTTTTAAATA TERM 934 899618 - 899606 - R 74 -4.9 -5.01845 | opp_overlap 899606 TATAATAATGAAAAA TCTTA CTT TAAGA GAAAAGCAAGATCTT Cla_0938 900347 - 899718 - | hypothetical protein Cla_0939 900574 - 900344 - | hypothetical protein Cla_0940 901610 - 900558 - | hypothetical protein TERM 935 900958 - 900974 + g 84 -6.7 -5.28481 | overlap 900964 AAAGTATCATCATTT TCTTTTT TAA AAAAAGA TTTTTTAATTCCATG flhA 903779 - 901620 - | flagellar biosynthesis protein FlhA Cla_0942 904176 - 903772 - | transcriptional regulator, BadM/Rrf2 family rpsO 904352 - 904624 + | 30S ribosomal protein S15 TERM 936 904608 - 904650 + T 71 -2.9 -5.52096 | opp_overlap 904609 904614 904616 904622, overlap 904609 904616 904622 TAATTAGCGAATTAA ACTTAAGAGATAAATAAGC CTCGT GCTTATTTATCTTTAAACA TTTTTTATTACATTT TERM 937 904648 - 904609 - T 82 -8.3 -3.94404 | gap 1, opp_overlap 904609 904608 904616 904622, overlap 904614 904616 904622 AATTAGCGAATTAAA CTTAAGAGATAAATAAGC CTCGT GCTTATTTATCT-TTAAA CATTTTTTATTACAT TERM 938 904644 - 904614 - T 75 -8.5 -3.33399 | opp_overlap 904609 904608 904616 904622, overlap 904609 904616 904622 GCGAATTAAACTTAA GAGATAAATAAGC CTCGT GCTTATTTATCTT TAAACATTTTTTATT TERM 939 904642 - 904616 - T 86 -11.1 -3.22878 | opp_overlap 904616 904609 904608 904622, overlap 904614 904609 904622 GAATTAAACTTAAGA GATAAATAAGC CTCGT GCTTATTTATC TTTAAACATTTTTTA TERM 940 904616 - 904642 + T 91 -11.1 -3.7046 | opp_overlap 904614 904609 904616 904622, overlap 904609 904608 904622 GAATTAAACTTAAGA GATAAATAAGC CTCGT GCTTATTTATC TTTAAACATTTTTTA Cla_0944 905706 - 904813 - | NOL1/NOP2/sun family protein TERM 941 905030 - 905014 - G 73 -5.9 -4.56597 | TTCTTCCCTTAAAAA TGTACAG GTA CTATACA CTAATTCTCCACCAT Cla_0945 906079 - 905693 - | conserved hypothetical protein (UPF0081 domain protein) TERM 942 905927 - 905947 + g 79 -5.5 -5.07053 | TACCACTAAAGTATT TACATCATA CTC TTTGATGTA TTTTTTCACCTCATT dprA 906843 - 906076 - | DNA processing protein A Cla_0947 907897 - 906830 - | conserved hypothetical protein, polysaccharide deacetylase domain protein TERM 943 907114 - 907102 - G 77 -4.9 -5.1963 | opp_overlap 907102 TTGAATCAACAAAAA CAAAA TCG TTTTG TTTAAAAGCACTAAA TERM 944 907457 - 907475 + g 71 -2.4 -5.44119 | overlap 907459 ATCATCTATAATAAT TGCTAGAC GAG GTTTGGTA TTTTTTTGCACTAGG TERM 945 907852 - 907876 + g 93 -5.7 -5.73978 | opp_overlap 907854 907858, overlap 907854 TTCCAAACACAACCA AACAAAGCGCT AAA AGCACTTTGTG TTTTTTATTTATAGT TERM 946 907854 - 907874 + g 85 -8.3 -4.49311 | opp_overlap 907854 907858, overlap 907852 CCAAACACAACCAAA CAAAGCGCT AAA AGCACTTTG TGTTTTTTATTTATA TERM 947 907874 - 907854 - G 95 -10.5 -4.11501 | opp_overlap 907854 907852, overlap 907858 CCAAACACAACCAAA CAAAGCGCT AAA AGCACTTTG TGTTTTTTATTTATA TERM 948 907870 - 907858 - G 73 -5.5 -4.60886 | opp_overlap 907854 907852, overlap 907854 ACACAACCAAACAAA GCGCT AAA AGCAC TTTGTGTTTTTTATT ilvC 908921 - 907899 - | ketol-acid reductoisomerase TERM 949 909122 - 909093 - g 79 -5.9 -5.16071 | opp_overlap 909093 909101 AATTACCAATAAAAA CAAGCAAATAATT AGAG AATTATTAACTTG TGATATTATTAAATT rnr 909031 - 910971 + | ribonuclease R TERM 950 911872 - 911860 - g 71 -4.9 -4.72473 | TGAATTAAAAAAGAA TTCTA AAA TAGAA AAAAAAGAGTTTTTA Cla_0950 910964 - 911929 + | hypothetical protein TERM 951 911973 - 911957 - f 79 -8.1 -4.00124 | opp_overlap 911957 TATGGTAGAATGAAA TTTGCAT TTT ATGCAAA TCCTTGCCTAAAAAA TERM 952 911979 - 911996 + F 83 -8.5 -4.0641 | TTTATGCAAATCCTT GCCTAAA AAAT TTTAGGC TTTATATCCATAAGG rpsF 912021 - 912395 + | 30S ribosomal protein S6 TERM 953 912763 - 912743 - g 80 -6.3 -4.85618 | opp_overlap 912746, overlap 912738 AAATAACCAACAAAA CAATTTTGA CAA TCAAAATTA TGGCTATAATCAAAA ssb 912399 - 912926 + | single-strand DNA binding protein rpsR 912937 - 913197 + | 30S ribosomal protein S18 TERM 954 913231 - 913210 - f 100 -13.1 -3.59233 | overlap 913206 TAATTATTAAATCAA TCCCAAGCT TTTA AGCTTGGGA AAATAAAAGGTTGCC TERM 955 913253 - 913273 + G 71 -7 -3.92716 | AAGGTTGCCTTATGT TTTCAGAT ATAGA ATCTGAAA TTTACATTATTTTGC Cla_0954 913249 - 913890 + | integral membrane protein, MarC family Cla_0955 914294 - 913872 - | conserved hypothetical protein, probable periplasmic protein Cla_0956 915019 - 914291 - | hypothetical protein Cla_0957 915299 - 915003 - | hypothetical protein TERM 956 915294 - 915268 - G 83 -6.7 -5.16133 | gap 1, opp_overlap 915268 ATTACAATACAAAAA GCAAGC-TCTAG GAGA CTAAAAGCTTGC TTCATTTATTTAAAC proC 915991 - 915296 - | pyrroline-5-carboxylate reductase Cla_0959 916419 - 916024 - | conserved hypothetical protein (DUF180 domain protein) Cla_0960 916596 - 917252 + | conserved hypothetical lipoprotein TERM 957 918965 - 918953 - g 81 -6.3 -5.03747 | overlap 918955 AAATGTGTTAAAAAA CTTCT TTT AGAAG AAAATATTAAAAATA TERM 958 919272 - 919255 - g 85 -5.7 -5.36314 | CAAAACACCAAAAAA TCTTTTT TATA AAAAAGA TGAAAGTATTTACAA lon 917252 - 919630 + | DNA-binding, ATP-dependent protease La TERM 959 919656 - 919634 - T 100 -13.6 -4.56597 | opp_overlap 919634, overlap 919617 GCTCTTGCTTAAAAA CTAGAAGCTT ATG AAGCTTCTAG TTTGTCCATAATTAA TERM 960 919634 - 919656 + T 100 -13.6 -3.95153 | opp_overlap 919617 919634 GCTCTTGCTTAAAAA CTAGAAGCTT ATG AAGCTTCTAG TTTGTCCATAATTAA Cla_0962 921018 - 919642 - | MCP-domain signal transduction protein TERM 961 919730 - 919740 + g 75 -4 -5.18561 | TCATAATCTTCTTTT GAAA TAT TTTC TTTTTTAGCTATTTC Cla_0963 921520 - 921029 - | putative PAS domain signal transduction sensor protein Cla_0964 922094 - 921603 - | putative PAS domain signal transduction sensor protein ilvA 923349 - 922138 - | threonine dehydratase Cla_0966 923741 - 923352 - | CoA-binding domain protein Cla_0967 924951 - 923779 - | major facilitator superfamily transporter TERM 962 924657 - 924647 - G 72 -2.6 -5.48054 | ATCAAAATCAAAAAA TATA CAT TATA AAATTTCAAATACAT trmA 926480 - 925440 - | tRNA (uracil-5-)-methyltransferase TERM 963 926471 - 926434 - G 91 -10.1 -4.08706 | opp_overlap 926444 926445, overlap 926417 926445 TCTTTATCATATAAA GAAGAAAACAATGCTTT ATTT AAAGCAATCTTTTCTTC AAAATGCATTTAAGC TERM 964 926460 - 926445 - G 76 -6.2 -4.57912 | opp_overlap 926445 926444, overlap 926434 TAAAGAAGAAAACAA TGCTTT ATTT AAAGCA ATCTTTTCTTCAAAA Cla_0970 928193 - 926481 - | Na+/H+ antiporter family protein TERM 965 926637 - 926612 - G 72 -7 -4.06384 | gap 1 TGCTAATAGCACAAA CACTC-AATGC ATAAG GCATTTGAGTG CTAACATGTGCCAAA TERM 966 926912 - 926900 - G 78 -3.4 -5.63236 | ATGCAAAAATAAAAA TTGC AGTTG GCAA TAAATAAATAGGAGT Cla_0971 928956 - 928210 - | oxidoreductase, short chain dehydrogenase/reductase family Cla_0972 930200 - 928953 - | conserved hypothetical protein, ankyrin repeat domain protein ogt 930310 - 930762 + | methylated-DNA--protein-cysteine methyltransferase TERM 967 930849 - 930869 + G 86 -3.3 -5.90231 | overlap 930850 930864 TGGAAATGGATAGTT TTTTTGCGG CAT TTGCAAAAG TTTTTTTGTCTTTAT Cla_0974 930764 - 931642 + | conserved hypothetical protein, MadN family (DUF6 domain protein) truA 932330 - 931596 - | tRNA pseudouridine synthase A Cla_0976 933356 - 932331 - | putative permease, YjgP/YjgQ family Cla_0977 934099 - 933353 - | peptidase, A24 family TERM 968 933803 - 933790 - G 74 -2.4 -5.5943 | AAAGCATTAAAAAAA TTGC TAACAT GCAA GCAAAAATTAAAATT uppS 934764 - 934096 - | undecaprenyl diphosphate synthetase TERM 969 934572 - 934585 + g 78 -6.7 -4.57353 | ACTCAACTTCCTCTT TTGGC CTTT GCCAA TTTTCTGTGCTAAAA Cla_0979 935389 - 934766 - | hypothetical protein dfp 936540 - 935383 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 970 935901 - 935912 + g 73 -5.8 -4.66833 | AAAAAGCATCAGCTA TGGC TTTT GCCA TTTTTCCACTTGAAA TERM 971 935989 - 936006 + g 72 -4.3 -5.02074 | ACCGCTTATTATTAT TTTTTTA TCCA TAAAAAA TTTTTTAGAAAATAA TERM 972 936107 - 936126 + g 72 -5 -4.80853 | overlap 936090 AATTTTTTACAAATT GGATCTAT TATA ATAGCTCC TTGTTTTTTTAAAAT glmU 937826 - 936537 - | UDP-N-acetylglucosamine pyrophosphorylase fliP 937964 - 938698 + | flagellar biosynthesis protein FliP Cla_0983 938708 - 939619 + | conserved hypothetical integral membrane protein, predicted permease TERM 973 939873 - 939856 - g 85 -2.1 -6.04419 | overlap 939870 AAAAGAAGAAAAAAA TTTATTC ATGA AAATAAA AATTTAGACTTTTAC TERM 974 941129 - 941141 + G 86 -6.3 -5.40072 | GGAAAGAAAATACTT GCTAT GAT ATAGC TTTTTTTAACGAGCA pabB 939628 - 941376 + | para-aminobenzoate synthase component I, ADC synthase pabA 941373 - 941945 + | para-aminobenzoate synthase component II, glutamine amidotransferase TERM 975 942662 - 942640 - g 82 -4.2 -5.63504 | opp_overlap 942644, overlap 942645 AAGTGCAGAAAAAAA CAAAAGCTAT GAA ATAGCCCTTA TGCAAGAAAAATTGA TERM 976 942657 - 942645 - g 90 -6.3 -5.61277 | opp_overlap 942644, overlap 942640 CAGAAAAAAACAAAA GCTAT GAA ATAGC CCTTATGCAAGAAAA TERM 977 943029 - 943019 - g 76 -5.4 -5.14698 | AAAGTTAAAATAAAA GCAT TAA ATGC AAGTTTTAAAGCAGC cmeD 941981 - 943237 + | outer membrane component of efflux system TERM 978 943418 - 943398 - g 72 -7 -4.17355 | overlap 943396 CAAGGTGAAAAAAGA TCAAGTTT TACTT AAACTTGA AGATTCTAGTGAGCA cmeE 943234 - 943974 + | membrane fusion component of efflux system cmeF 943977 - 946991 + | integral membrane component of efflux system Cla_0989 947321 - 946992 - | conserved hypothetical protein, ArsC family aroG 948655 - 947315 - | 3-deoxy-D-arabinoheptulosonate 7-phosphate synthase (DAHP synthetase) Cla_0991 949061 - 948708 - | hypothetical protein TERM 979 948913 - 948934 + g 83 -10.3 -3.41366 | opp_overlap 948912 948904 948902, overlap 948904 948910 GTAATATCAAAAGGT GCTTTATGA TCTT TCATAAAGC TGTCTTTTGACATAG rplS 949420 - 949064 - | 50S ribosomal protein L19 trmD 950136 - 949432 - | tRNA (guanine-N1)-methyltransferase TERM 980 949469 - 949481 + g 70 -6.3 -4.07568 | opp_overlap 949464 TGATACAAATCAGGA CGAAA ATA TTTCG TTTTGCAAGACGCCA rimM 950609 - 950133 - | 16S rRNA processing protein TERM 981 950511 - 950554 + g 70 -6.5 -4.15833 | opp_overlap 950522, overlap 950514 TTTATCAAAAGCCTT TATGGTG-TAAATTTTTTGAT TAAT GTCAAAAAATTTAGCACC-TA TTTTAAACTGCTCAT TERM 982 950514 - 950552 + g 90 -10.7 -3.67634 | gap 1, opp_overlap 950522, overlap 950511 ATCAAAAGCCTTTAT GGTG-TAAATTTTTTGAT TAAT GTCAAAAAATTTAGCACC TATTTTAAACTGCTC Cla_0995 950892 - 950647 - | hypothetical protein rpsP 951122 - 950895 - | 30S ribosomal protein S16 ffh 952531 - 951194 - | signal recognition particle protein TERM 983 952094 - 952077 - G 90 -8.5 -4.91852 | opp_overlap 952076 952073 TCGATGAAAAATAAA TCAAGCT CATT AGCTTGA GTGAGTTGTCTTAAT TERM 984 952594 - 952607 + r 74 -2.5 -5.63517 | opp_overlap 952604, overlap 952604 TTAGCTTTAAACGCC TTTAA AAAT TTAAA TTTTTTATTTCAAAA Cla_0998 953347 - 952595 - | putative ribosomal large subunit pseudouridine synthase TERM 985 953163 - 953179 + g 87 -2.3 -6.28401 | overlap 953164 ATGATTTTATCATCT TCAAAAA GTA TTTTTGC TTTTTTTATTTTTTG TERM 986 953164 - 953178 + g 70 -5.8 -4.3155 | overlap 953163 TGATTTTATCATCTT CAAAAA GTA TTTTTG CTTTTTTTATTTTTT kdtA 954512 - 953328 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 987 953795 - 953811 + g 72 -5.2 -4.80959 | CTGGATGTCTTGGAG CGATAA TCAAT TTATCG TTTTCTTCTAAATTA TERM 988 954488 - 954463 - G 93 -11.3 -3.51774 | overlap 954461 ATCAATAAAAAAGGA GCTGCAATTAT ATAT ATAATCGCAGC AAAAATATAATAAAA Cla_1000 955228 - 954509 - | conserved hypothetical protein (DUF164 domain protein) Cla_1001 955965 - 955240 - | conserved hypothetical protein (NIF3 domain protein) TERM 989 955294 - 955316 + g 70 -6.4 -4.07568 | opp_overlap 955294 955289 AACTTCTAAATGAAA TTTTTGCAAA TCT TTTGCTAAAA TTTTACCAAAGCAAG TERM 990 955316 - 955294 - G 70 -6.4 -4.06903 | opp_overlap 955294, overlap 955289 AACTTCTAAATGAAA TTTTTGCAAA TCT TTTGCTAAAA TTTTACCAAAGCAAG TERM 991 955678 - 955696 + g 90 -4.6 -5.75478 | GTCAAAATTCGTATG CATAGC AATTAAA GCTATG TTTTTTTGTATCATT glyQ 956815 - 955955 - | glycyl-tRNA synthetase, alpha chain Cla_1003 957318 - 956812 - | hypothetical protein purE 957822 - 957328 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit Cla_1005 959075 - 957819 - | peptidase, U32 family TERM 992 957896 - 957911 + g 71 -4.8 -4.76802 | overlap 957905 TTTCATTACCGCTGT GAATTT CATT AAATTC TTTATTATTTTTGGC TERM 993 958997 - 959023 + g 70 -3.7 -5.1417 | opp_overlap 958997 958999, overlap 958999 TAACTCCCGCATAAA CAGCATCAGCT CCATA AGCTAATGCTA TTTTTAATTTTGTGA TERM 994 959023 - 958997 - G 80 -8.8 -3.86822 | opp_overlap 958997 958999, overlap 958999 TAACTCCCGCATAAA CAGCATCAGCTC CAT AAGCTAATGCTA TTTTTAATTTTGTGA TERM 995 958999 - 959021 + g 70 -6.3 -4.17748 | opp_overlap 958997 958999, overlap 958997 ACTCCCGCATAAACA GCATCAGCT CCATA AGCTAATGC TATTTTTAATTTTGT TERM 996 959021 - 958999 - G 79 -9.2 -3.52113 | opp_overlap 958999 958997, overlap 958997 ACTCCCGCATAAACA GCATCAGCTC CAT AAGCTAATGC TATTTTTAATTTTGT Cla_1006 959779 - 959072 - | hypothetical protein TERM 997 959926 - 959903 - H 78 -2.6 -5.9873 | TGACTATAAAAAAAA TATTAATTTA AACT TAATTTAATA AAAATATACTACAAT glnA 959982 - 961412 + | glutamine synthetase TERM 998 961413 - 961439 + T 100 -12.5 -3.55548 | TGTTATTCTTGCTAA TTTTTGATGCC AAAAA GGCATCAAAAA TTTAAAACACTATTG TERM 999 961442 - 961459 + T 71 -5.7 -4.39166 | opp_overlap 961441 961442 AAGGCATCAAAAATT TAAAACA CTAT TGTTTTA TTTTCGTGTATAAAA cca 963375 - 961441 - | tRNA nucleotidyltransferase/formyltetrahydrofolate deformylase TERM 1000 963024 - 962999 - GT 83 -8.5 -4.16392 | opp_overlap 962998, overlap 962997 TTAAAATCAAAAATA TTTACCATCAA TGCA TTAATGGTAAA ATCCCTTCTTTTAGC TERM 1001 963153 - 963130 - GT 70 -6.2 -4.06502 | opp_overlap 963126, overlap 963126 TAGGGCTAAATCAAA TTTTTTGTAT TTAT ACACAAAAAA ACTTTTCCCAACCCC Cla_1009 963769 - 963344 - | hypothetical protein Cla_1010 964011 - 963766 - | hypothetical protein Cla_1011 965249 - 964077 - | major facilitator superfamily transporter TERM 1002 964492 - 964482 - G 83 -6.8 -5.12971 | opp_overlap 964485, overlap 964471 964484 AATAGGCAATAAAAA TGCC ACA GGCA TGCCTATGATTTGAG Cla_1012 965419 - 965252 - | hypothetical protein napD 965757 - 965422 - | periplasmic nitrate reductase assembly protein napL 966670 - 965744 - | periplasmic protein NapL TERM 1003 966273 - 966259 - G 72 -5 -4.8048 | TTTTTAGATCAAAAA GCTCTA TAT TAGAAC CTAGCAAGGCTAATA napB 967193 - 966675 - | periplasmic nitrate reductase, small subunit, cytochrome c-type protein TERM 1004 966700 - 966713 + g 85 -3.9 -5.72053 | opp_overlap 966700 CCTTCATTTAAAACA TCTAA AAGA TTAGA TTTTTTCTTTGATTC TERM 1005 967173 - 967185 + g 70 -3.5 -5.15526 | opp_overlap 967173 AGCTGCTGCTAAGGA TAAAA AGA TTTTA TTTTTCATTTTCTCT napH 967974 - 967183 - | methylamine utilization ferredoxin-type protein napG 968720 - 967971 - | Fe-S ferredoxin-type protein TERM 1006 968033 - 968051 + g 83 -6.8 -5.02231 | overlap 968034 TGAAATTTTTATCTG TGTTTACA TCT TGTAAACG TTTTTCATCTTTTTC TERM 1007 968034 - 968050 + g 74 -8.1 -3.58899 | overlap 968033 GAAATTTTTATCTGT GTTTACA TCT TGTAAAC GTTTTTCATCTTTTT napA 971497 - 968723 - | periplasmic nitrate reductase, large subunit TERM 1008 968784 - 968800 + g 73 -5.9 -4.62441 | opp_overlap 968784 TTGGACAATGGACAA GTTGCAT CTA ATGTAAC TTTGTTTATATAAAC TERM 1009 971512 - 971551 + r 75 -9.8 -2.67477 | opp_overlap 971520, overlap 971520 TTATATCCCTCGTTA TTATTATATTTATGTA CAAAAGAA TACATAAATATAATAA TACTATCGATTAGTT TERM 1010 971649 - 971676 + r 84 -10.1 -3.61589 | opp_overlap 971649 971655, overlap 971655 AAAGTATATTACATA TTAAAACGCTA TTAAAT TAGCGTTTTAA TTGATTTACTATTCC TERM 1011 971676 - 971649 - R 79 -10.1 -2.99834 | opp_overlap 971649 971655, overlap 971655 AAAGTATATTACATA TTAAAACGCTA TTAAAT TAGCGTTTTAA TTGATTTACTATTCC flgG1 972459 - 971665 - | flagellar distal rod protein FlgG flgG2 973286 - 972477 - | flagellar distal rod protein FlgG rpoD 973422 - 975299 + | RNA polymerase sigma 70 factor TERM 1012 975319 - 975300 - T 86 -10.8 -3.3482 | opp_overlap 975300 GAAGGTTGGAAGTAA TCCTTGCT AAAA AGCAAGGA TTAGCTATCTCTAAA TERM 1013 975300 - 975319 + T 85 -10.8 -3.17797 | opp_overlap 975300 GAAGGTTGGAAGTAA TCCTTGCT AAAA AGCAAGGA TTAGCTATCTCTAAA ppk 977413 - 975320 - | polyphosphate kinase nrfH 977642 - 978136 + | cytochrome c nitrite reductase, small subunit NrfH TERM 1014 978270 - 978251 - g 72 -5 -4.70515 | opp_overlap 978251 CACAGCTAAAACAAA TGATTCAG TGGG CGGAATCA TTTCTCAAGAAATTG nrfA 978153 - 979970 + | cytochrome c nitrite reductase, catalytic subunit NrfA TERM 1015 979974 - 980003 + T 83 -8 -4.4017 | opp_overlap 979977 979981, overlap 979977 979981 GTAATAGATTAATCA AAATAAACCCTC ATAATC GAGGGTTTATTC TTTTATCAAACTTAC TERM 1016 980000 - 979977 - T 93 -10.4 -4.48333 | opp_overlap 979974 979977 979981, overlap 979981 ATAGATTAATCAAAA TAAACCCTCA TAAT CGAGGGTTTA TTCTTTTATCAAACT TERM 1017 979977 - 980000 + T 89 -9.7 -4.31397 | opp_overlap 979977 979981, overlap 979974 979981 ATAGATTAATCAAAA TAAACCCTC ATAATC GAGGGTTTA TTCTTTTATCAAACT TERM 1018 979981 - 979996 + T 73 -6.1 -4.72617 | opp_overlap 979981 979977, overlap 979977 979974 ATTAATCAAAATAAA CCCTC ATAATC GAGGG TTTATTCTTTTATCA TERM 1019 979996 - 979981 - T 82 -6.8 -4.78981 | opp_overlap 979977 979974 979981, overlap 979977 ATTAATCAAAATAAA CCCTCA TAAT CGAGGG TTTATTCTTTTATCA thiC 981299 - 979998 - | thiamine biosynthesis protein ThiC TERM 1020 980531 - 980542 + g 71 -5.8 -4.46615 | TCACTTGTACATCTT GAGC CCAT GCTC TTTTGGTTAATAATG dnaQ 982250 - 981486 - | DNA polymerase III, epsilon subunit TERM 1021 982216 - 982234 + g 76 -6.8 -4.46854 | overlap 982218 982224 TTTTCTTTGCTTAGC TTGATGAT TAA ATCATCGA TTTGTTGTTGGCTCA rpe 982894 - 982247 - | D-ribulose-5-phosphate 3-epimerase TERM 1022 983103 - 983087 - g 81 -9.5 -3.68073 | TATGGTAGGTAACAA TGTTAGC CAT GCTAACA ATAAAACAAAAAGAC TERM 1023 983126 - 983110 - g 90 -8.1 -4.90079 | ATGCTAACAATAAAA CAAAAAG ACG CTTTTTG CCAAATTTAAGAACA rpmB 983037 - 983231 + | 50S ribosomal protein L28 TERM 1024 983779 - 983760 - g 72 -6.5 -4.20696 | overlap 983752 TGATGAAGTTGAAAA TTTCAGC GAGATT GCTGAAA AATATAATTATCCTT Cla_1030 983257 - 984384 + | conserved hypothetical protein (TrkA domain protein) Cla_1031 984432 - 984647 + | conserved hypothetical protein (DUF465 domain protein) Cla_1032 984681 - 985808 + | MCP-domain signal transduction protein TERM 1025 985835 - 985806 - T 93 -6.6 -5.44198 | opp_overlap 985811, overlap 985811 AATAAAGAAGAAAAA TAAAAGGTAAGA TTTAAT TCTTACCTTTAA ACCATAAATACGCAT TERM 1026 985830 - 985811 - T 93 -6.5 -5.44638 | opp_overlap 985811, overlap 985806 AGAAGAAAAATAAAA GGTAAGA TTTAAT TCTTACC TTTAAACCATAAATA Cla_1033 986388 - 985819 - | NUDIX domain protein TERM 1027 986285 - 986262 - G 83 -3.2 -5.74122 | overlap 986264 TATGATATAAAAAAA CAGAAACACT ATCT AATGCTTCTA TAAAATCCCAAGTAT TERM 1028 986489 - 986460 - R 74 -8 -3.5834 | overlap 986461 AATAAAAAATCAAGA GTGAGTTGCTTT ATATAA AAAGCAACTCAA AAGCAACAAAAAGAT TERM 1029 986488 - 986461 - R 87 -11.5 -2.72564 | overlap 986460 ATAAAAAATCAAGAG TGAGTTGCTTT ATATAA AAAGCAACTCA AAAGCAACAAAAAGA TERM 1030 986523 - 986502 - R 85 -5.2 -5.28166 | CAAAAGCAACAAAAA GATGGTAT TACATC ATACCACC CATGCCTCCCATGCC groEL 988146 - 986509 - | 60 kD chaperonin (cpn60) TERM 1031 987698 - 987723 + g 76 -2.7 -5.56264 | gap 1 TCATCTGAATTTGCA GAAATTGTTGCA ACT TG-AGCGATTTC TTTTTTATCTTTAAC groES 988420 - 988160 - | 10 kD chaperonin (cpn10) TERM 1032 988308 - 988318 + g 79 -5.4 -5.29846 | ACTGCAGCAACTTCA CCAT TTA ATGG TTTTTCTTTAGCATT TERM 1033 988520 - 988564 + H 89 -10.5 -3.81022 | opp_overlap 988520, overlap 988520 ATAAATTAAGTAAAA TATATCATATATATTTAGT CTATATC ACTAAATTTATATGATATA TTATTATAAAGGTTT TERM 1034 988564 - 988520 - H 93 -10.5 -4.53774 | opp_overlap 988520 988520 ATAAATTAAGTAAAA TATATCATATATATTTAGT CTATATC ACTAAATTTATATGATATA TTATTATAAAGGTTT TERM 1035 990386 - 990371 - g 71 -4.8 -4.70319 | TCACTAAAAGGAAAA TTTGAT CTTA ATCAAA TGGCTCTAGCAAGTA Cla_1036 988583 - 991126 + | hypothetical protein TERM 1036 991154 - 991131 - T 100 -12.6 -4.15788 | opp_overlap 991131, overlap 991118 AACTCTTCTAATAAA TCTAGCCTTT AAAA AAAGGCTAGA TTTTTATTAAAATAA TERM 1037 991131 - 991154 + T 100 -12.6 -5.08601 | opp_overlap 991118 991131 AACTCTTCTAATAAA TCTAGCCTTT AAAA AAAGGCTAGA TTTTTATTAAAATAA Cla_1037 991679 - 991161 - | sigma 54 modulation protein/ribosomal protein S30EA Cla_1038 992440 - 991760 - | HhH-GPD family protein mfd 995376 - 992437 - | transcription-repair coupling factor TERM 1038 994431 - 994419 - G 79 -7.7 -4.26693 | overlap 994416 TTAAAGAAATAACAA GCTCA TCT TGAGC GATTAGATTGATTCT TERM 1039 994492 - 994513 + g 77 -4.5 -5.252 | opp_overlap 994490 994496, overlap 994496 AAATTCTTGTAAATT TAAAGCTTT AAAC AAAGCTTCA TTTTTTATCAAAATA TERM 1040 995216 - 995199 - G 87 -8.5 -4.72486 | TACAAATTTCAAAAA GCTCTTT AGAA AAAGAGC GCAAGTCACTGCCAA TERM 1041 995278 - 995261 - G 70 -5.7 -4.21922 | TCAGGCAAAACGAAA GTTTTTA AATT TAAAAAC AGACAAACCTGGGCT Cla_1040 995770 - 995366 - | conserved hypothetical protein (DUF583 domain protein) Cla_1041 996606 - 995698 - | peptidase, M23/M37 family TERM 1042 995846 - 995832 - GR 79 -5.8 -4.94992 | opp_overlap 995831 995832, overlap 995826 TTAAATCTATAAAAA TTTTAG GGT CTAAAA GTTTATTAATAAATC folC 997765 - 996596 - | folylpolyglutamate synthase/dihydrofolate synthase Cla_1043 999134 - 997767 - | hypothetical protein Cla_1044 999633 - 999136 - | conserved hypothetical lipoprotein TERM 1043 999337 - 999323 - G 71 -7.2 -3.72765 | opp_overlap 999323 AATGCAAATTCCAAA TAAAGC TCT GCTTTA TAATTAATCACATAA leuS 1002059 - 999630 - | leucyl-tRNA synthetase TERM 1044 999953 - 999940 - G 71 -3.1 -5.25799 | AAAATAATATAAAAA GCTTC TTTT GAAAC TTCTTTATGATTTAT TERM 1045 1000837 - 1000819 - G 72 -6.1 -4.20696 | TCACGAATTTTAAAA TTGGTAA CCTTT TTACCAA TACCCAAAGATTCAA TERM 1046 1001965 - 1002016 + g 75 -4.8 -5.16472 | gap 1, opp_overlap 1001983, overlap 1001985 1002010 GATAAAATGTATTTT TTTGGTAAAGAAAAATCATCTTTTG GTT CAAAATATTCTTTTTCT-TGCCAAA TTTTTTGCCATTTTT TERM 1047 1002010 - 1002026 + g 90 -3.7 -6.18768 | overlap 1001965 AAATATTCTTTTTCT TGCCAAA TTT TTTGCCA TTTTTTTTCTATTTT Cla_1046 1002409 - 1002068 - | hypothetical protein secF 1003383 - 1002412 - | protein-export membrane protein SecF secD 1004963 - 1003383 - | protein-export membrane protein SecD Cla_1049 1005231 - 1004956 - | conserved hypothetical integral membrane protein, putative preprotein translocase Cla_1050 1005201 - 1006523 + | conserved hypothetical integral membrane protein, putative apolipoprotein N-acyltransferase TERM 1048 1006537 - 1006508 - TR 89 -10.9 -3.69455 | opp_overlap 1006514 1006530, overlap 1006514 AGAAAAACTTTTAAA GCAAAATGAAGCC TAAA AGCTTCATTTTAC AATGCTTTAAATTCA TERM 1049 1006531 - 1006514 - TR 74 -6.3 -4.55128 | opp_overlap 1006514 1006530, overlap 1006508 ACTTTTAAAGCAAAA TGAAGCC TAAA AGCTTCA TTTTACAATGCTTTA metK 1007727 - 1006534 - | S-adenosylmethionine synthetase TERM 1050 1006802 - 1006812 + g 70 -4 -5.00616 | opp_overlap 1006802 ATAGCATAAGAAAGT TGTA CTA TACA TTTTTTGGCAAGACC TERM 1051 1007807 - 1007796 - H 75 -4.4 -5.18355 | opp_overlap 1007796 CTTAAAAATCAAAAA GCTT ATTT AAGC TTTACTTTGTTAGAA TERM 1052 1008859 - 1008872 + G 72 -8.1 -3.31792 | CTTTTGAGTGTTTTA GCTGC ATTT GCAGC TTGTGGAGCTAGTGG Cla_1052 1007860 - 1009086 + | sodium/dicarboxylate symporter family protein pyrB 1009096 - 1009974 + | aspartate carbamoyltransferase TERM 1053 1010096 - 1010078 - g 70 -5.4 -4.67173 | opp_overlap 1010078 GAATTTAAAAAACAA TATGAAAA TAA TCTTCATA GTTTAGACAATGAGC TERM 1054 1010236 - 1010281 + G 79 -7.3 -4.4715 | gap 1, opp_overlap 1010236 1010231 1010250, overlap 1010231 1010250 TGCAAAATATGAAAA TTTAAGC-AAAAAAATAGAAGA AAA TCTTTTATTTTTTGAGCTTGAA TTTTGTGAGTTAAAA TERM 1055 1010266 - 1010250 - g 74 -2.3 -5.64006 | opp_overlap 1010236 1010231 1010250, overlap 1010236 1010231 ATTTAAGCAAAAAAA TAGAAGA AAA TCTTTTA TTTTTTGAGCTTGAA TERM 1056 1010250 - 1010266 + G 75 -4.5 -5.09426 | opp_overlap 1010250 1010236 1010231, overlap 1010236 1010231 ATTTAAGCAAAAAAA TAGAAGA AAA TCTTTTA TTTTTTGAGCTTGAA TERM 1057 1011104 - 1011120 + G 70 -3.7 -5.08824 | opp_overlap 1011097 1011104 ACTATACATCAAAAA CTTTCTT ATA AAGTAAG TTTTTTAAATCAAGA TERM 1058 1011541 - 1011556 + G 76 -6.2 -4.66163 | ATGTCCTGATTTTAC CTCAAT TTAT ATTGAG TTTTTAAGTAGCGGT pepF 1009979 - 1011700 + | oligoendopeptidase F Cla_1055 1011693 - 1012139 + | hypothetical protein uvrD 1012136 - 1014199 + | ATP-dependent DNA helicase truB 1014196 - 1015014 + | tRNA pseudouridine synthase B csrA 1015008 - 1015235 + | carbon storage regulator ispE 1015232 - 1015987 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 1059 1016026 - 1016010 - g 84 -6.7 -5.2422 | opp_overlap 1016009 1016010 AACTATAGTAAAAAA CAAAAAA GCT TTTTTTG ATTATGAAATTTTAG TERM 1060 1016427 - 1016398 - g 100 -8.7 -5.64421 | gap 1, opp_overlap 1016404, overlap 1016401 AGCTTAAAGAAAAAA CA-AGCAGATCTTG AAG CAAGAGCTGCTATG AAAAATCATTATTAA TERM 1061 1016423 - 1016401 - g 100 -10.6 -4.88687 | opp_overlap 1016404, overlap 1016398 TTAAAGAAAAAACAA GCAGATCTTG AAG CAAGAGCTGC TATGAAAAATCATTA smpB 1015984 - 1016442 + | SsrA-binding protein trxC 1016455 - 1017072 + | possible periplasmic thioredoxin clpS 1017056 - 1017349 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1062 1018524 - 1018514 - gf 76 -2.6 -5.51165 | overlap 1018523 AAAAGGGTAAAAAAA TAAT AAA ATTA AAAGATTTAGAAAAT clpA 1017346 - 1019475 + | ATP-dependent ClpAP protease, ATP-binding subunit ClpA TERM 1063 1019596 - 1019618 + GF 71 -4.8 -4.77036 | overlap 1019599 CCCTGTGACTTGGTG GTGCCCTTCT CCT AGAATGGTGC TTTTTCCTGATGAAA TERM 1064 1019750 - 1019736 - gf 100 -5.7 -6.09888 | opp_overlap 1019735 CTTTAAGAAAAAAAA CTTGG ATAAA CCAAG AATTTATAGAAACTT aat 1019450 - 1020091 + | leucyl/phenylalanyl-tRNA--protein transferase flgB 1020183 - 1020614 + | flagellar proximal rod protein FlgB TERM 1065 1021102 - 1021082 - g 74 -6.1 -4.37527 | opp_overlap 1021082 TTACAAGCACTAAAA CTATAGCAC AAA GCGCGATAG ATTTACTAAGAGGTT flgC 1020625 - 1021119 + | flagellar proximal rod protein FlgC TERM 1066 1021267 - 1021256 - g 70 -5.8 -4.3351 | opp_overlap 1021258, overlap 1021258 ATAAAACTCAAGAAA CAGC TGAA GCTG CTATGGTAGACATCG fliE 1021123 - 1021416 + | flagellar proximal rod protein FliE TERM 1067 1022368 - 1022396 + G 71 -4.5 -4.78848 | overlap 1022388 AGTGCGATAGAATAT GGCTATGAAGCAG GTT CTGTTATAAAGCC TTTTATATTTACCAC pbpB 1021474 - 1023231 + | penicillin-binding protein TERM 1068 1023232 - 1023248 + T 72 -4.5 -4.92385 | opp_overlap 1023228 1023232 1023242, overlap 1023228 ACCAATCCAAACTAA CTTTAAA AAA TTTAGAG TTTTATTTAACTCTA TERM 1069 1023265 - 1023242 - T 90 -6.9 -5.10029 | opp_overlap 1023228 1023232, overlap 1023228 1023232 ACTAACTTTAAAAAA TTTAGAGTT TTATTT AACTCTAAA CTAAACAATTTAAAA hemH 1024163 - 1023261 - | ferrochelatase TERM 1070 1023831 - 1023821 - G 70 -4 -4.98061 | opp_overlap 1023821, overlap 1023816 ATAGAGGAAATAAAA TGAT TTC ATCA TTTTTTTGAAAATCA TERM 1071 1023821 - 1023831 + g 78 -4 -5.42259 | opp_overlap 1023821 1023816 ATAGAGGAAATAAAA TGAT TTC ATCA TTTTTTTGAAAATCA Cla_1070 1025023 - 1024163 - | oxidoreductase, Gfo/Idh/MocA family Cla_1071 1026102 - 1025020 - | DegT/DnrJ/EryC1/StrS aminotransferase family enzyme TERM 1072 1025207 - 1025225 + g 74 -2.4 -5.53079 | overlap 1025210 CATGGAATGTTATTA TCTTGTAA TTT TTGCATGA TTTTTTCTCTATTTT TERM 1073 1026272 - 1026247 - g 70 -5.4 -4.54727 | opp_overlap 1026247 1026242, overlap 1026242 TTTTTTAAATCAAAA GGGCATGAAA TCACTC CTTCAAGCCC TTTAGTTCCTGATGA TERM 1074 1026313 - 1026323 + G 72 -6.8 -4.1413 | opp_overlap 1026313 CTTTTTACTAATGCA GGCA TGG TGCC TTTTAAAAATATATT TERM 1075 1027600 - 1027580 - g 76 -2.7 -5.52023 | ATTATGAAGAAAAAA CTAAAAT CATAGCT ATTTTAG ATGAAAATTTTAAAA TERM 1076 1028403 - 1028388 - g 75 -4.8 -5.05782 | AGTTAGTTTAAAAAA TGAATT AAAA AATTCA AGCAAAACAGAGTTA alaS 1026205 - 1028742 + | alanyl-tRNA synthetase TERM 1077 1029090 - 1029080 - g 72 -4 -5.1523 | overlap 1029072 TTTAGAAGATAAAAA GATT TTT AATC TTAGCAAGTGTGATT maf 1028742 - 1029284 + | septum formation protein Maf TERM 1078 1029635 - 1029621 - g 74 -8.6 -3.23708 | opp_overlap 1029620, overlap 1029619 GTGGTGGAAAAACCA TGGAAG GAG CTTCCA CTCTTACGCAACAAT TERM 1079 1031162 - 1031139 - g 70 -4 -4.91852 | gap 1, opp_overlap 1031143 TTTATGAAAAACAAA GAGA-GTATTA CAC CAATACTTCTC CATTTCCAAAAAACA pbpA 1029281 - 1031215 + | penicillin-binding protein 1A Cla_1075 1031301 - 1032194 + | oxidoreductase, molybdopterin binding TERM 1080 1032318 - 1032346 + G 85 -4.6 -5.61824 | overlap 1032320 TTTATAGTGGTATAT TTGGCTTAATCT TTTTT GGATTGAGCCTA TTTTTTTCACTTTTA TERM 1081 1032320 - 1032344 + G 79 -7.2 -4.41528 | overlap 1032318 TATAGTGGTATATTT GGCTTAATCT TTTTT GGATTGAGCC TATTTTTTTCACTTT TERM 1082 1032386 - 1032399 + G 74 -5.3 -4.98758 | CATACAAAAGATTAC CCTAA ATTT TTAGG TTTTTATGCATTTTT Cla_1076 1032194 - 1032754 + | hypothetical protein Cla_1077 1032844 - 1034739 + | hypothetical protein TERM 1083 1034765 - 1034742 - T 95 -9.7 -4.58213 | opp_overlap 1034742 1034747 TAATGAACTATAAAA TCAAACTCC TTTTTG GGAGTTTGA TAAATTAACACTCTT TERM 1084 1034742 - 1034765 + T 81 -10.4 -2.53759 | opp_overlap 1034742, overlap 1034747 TAATGAACTATAAAA TCAAACTCCT TTTT GGGAGTTTGA TAAATTAACACTCTT Cla_1078 1036922 - 1034802 - | cation-transporting ATPase, P-type Cla_1079 1037432 - 1037118 - | conserved hypothetical protein, putative multidrug resistance efflux protein Cla_1080 1037770 - 1037429 - | conserved hypothetical protein, putative multidrug resistance efflux protein Cla_1081 1037922 - 1038629 + | conserved hypothetical protein (DUF28 domain protein) ppi 1038639 - 1039121 + | peptidyl-prolyl cis-trans isomerase Cla_1083 1039169 - 1039597 + | hypothetical protein Cla_1084 1039647 - 1040252 + | DedA-like protein TERM 1085 1040262 - 1040298 + F 86 -4.6 -5.73563 | opp_overlap 1040269, overlap 1040264 1040269 TCCTAAAAATTTCAA TTTTAAATACCTAGTT TCATC AGCTAGGTATTTTATA TTTTTTTAATTTAAT TERM 1086 1040264 - 1040296 + F 78 -7.2 -4.49088 | opp_overlap 1040269, overlap 1040262 1040269 CTAAAAATTTCAATT TTAAATACCTAGTT TCATC AGCTAGGTATTTTA TATTTTTTTAATTTA TERM 1087 1040269 - 1040291 + F 90 -7.1 -5.11475 | opp_overlap 1040269, overlap 1040264 1040262 AATTTCAATTTTAAA TACCTAGTT TCATC AGCTAGGTA TTTTATATTTTTTTA TERM 1088 1041026 - 1041046 + G 73 -9.1 -2.61429 | overlap 1041025 TTGTATTTAATTCCT GGGGTTTAT TTT ATAAACTCC GTTATAGACATTTTA Cla_1085 1040402 - 1041178 + | conserved hypothetical integral membrane protein (DUF1212 domain protein) Cla_1086 1041175 - 1041699 + | hypothetical protein TERM 1089 1041699 - 1041678 - T 88 -5.9 -5.31158 | opp_overlap 1041678 TAAAAAAAGTAAAAA TCACGATCA AAAT CAATCGTGA TTCATTTTATTTTTT argS 1043285 - 1041690 - | arginyl-tRNA synthetase TERM 1090 1042105 - 1042115 + g 79 -5.4 -5.1861 | opp_overlap 1042105 ACATCAAACTCTAAA TGTG TAT CACA TTTTTTACTAATAAA TERM 1091 1042709 - 1042693 - G 73 -9.5 -2.64155 | opp_overlap 1042689, overlap 1042689 TCTTTTTCAAATTCA GCAAAAG CCT CTTTTGC TACATCTATGATATA TERM 1092 1043195 - 1043182 - G 73 -3.8 -5.30616 | TTAGCCAAAGAAAAA GCCA AAGGTG TGGC AAAATGAGCTAGATT Cla_1088 1043534 - 1043295 - | Sec-independent protein translocase, MttA/Hcf106 family gmk 1044150 - 1043536 - | guanylate kinase Cla_1090 1045529 - 1044147 - | hypothetical protein fliR 1046359 - 1045589 - | flagellar biosynthesis protein FliR Cla_1092 1046981 - 1046346 - | ABC transporter, ATP-binding protein TERM 1093 1046966 - 1046933 - G 70 -5.3 -4.64657 | opp_overlap 1046924, overlap 1046924 TTAAATTTTTAAAAA GCGGAATATCAAAAC TATG GCTTAAATTTTCCGC TTTTAAAAGTTCCAT tsf 1048060 - 1046984 - | translation elongation factor EF-Ts TERM 1094 1047116 - 1047126 + g 83 -3.2 -5.67063 | TTTTTCTGCAATTAC CTGT TCA ACGG TTTTTTTATCATCCA rpsB 1048845 - 1048060 - | 30S ribosomal protein S2 TERM 1095 1049008 - 1048991 - R 100 -11.3 -5.11063 | opp_overlap 1048991 1048994 ATTATTGAAGAAAAA GAACGCC ACGA GGCGTTC TTTGGATAAATTAGT TERM 1096 1048991 - 1049008 + r 91 -11.3 -3.68886 | opp_overlap 1048991, overlap 1048994 ATTATTGAAGAAAAA GAACGCC ACGA GGCGTTC TTTGGATAAATTAGT TERM 1097 1048994 - 1049005 + r 74 -7.2 -3.97331 | opp_overlap 1048991, overlap 1048991 ATTGAAGAAAAAGAA CGCC ACGA GGCG TTCTTTGGATAAATT petC 1050146 - 1049019 - | ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit TERM 1098 1049962 - 1049975 + g 71 -2.3 -5.45802 | overlap 1049960 CTTCCCGAAGCATTA GCATC CACT GCTGC TTTTTCTTTTAAAGC petB 1051393 - 1050149 - | ubiquinol cytochrome c oxidoreductase, cytochrome b subunit petA 1051898 - 1051395 - | ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit TERM 1099 1051783 - 1051801 + g 85 -4.5 -5.63103 | overlap 1051785 CCTGCTGCTTTTACA CTTGGGA GTGGA TCCCATG TTTTTTTCATTGCAA TERM 1100 1051785 - 1051799 + g 71 -5.7 -4.45473 | overlap 1051783 TGCTGCTTTTACACT TGGGA GTGGA TCCCA TGTTTTTTTCATTGC TERM 1101 1052043 - 1052070 + r 90 -5.8 -5.48054 | opp_overlap 1052043 TGTTTTAAATCACAA CAATAGATAA GTTTATTA TTATCTATTG TTTTTTCATTTTGAT gidA 1053918 - 1052065 - | glucose inhibited division protein A TERM 1102 1053071 - 1053082 + g 70 -5.8 -4.34444 | TGGTGACTTTCTTTA TCGC TAAA GCGA TTTATCTTATCTTCA TERM 1103 1053413 - 1053426 + g 71 -2.4 -5.40625 | GCAAGCTCACCTACC CTAC CAGCTT GTAG TTTTTTCTCTCCTAT ribE 1054042 - 1054650 + | riboflavin synthase, alpha subunit Cla_1100 1054614 - 1055294 + | conserved hypothetical protein (DUF152 domain protein) Cla_1101 1055287 - 1055493 + | hypothetical protein Cla_1102 1056719 - 1055496 - | two-component sensor histidine kinase TERM 1104 1055707 - 1055719 + g 72 -6.3 -4.30909 | TCTATTATAAGTCTT TGCTT CAA AAGCA TTATTTTAATATGTC Cla_1103 1057377 - 1056712 - | two-component response regulator TERM 1105 1057390 - 1057416 + H 86 -3.9 -6.02914 | overlap 1057398 CATTTTTAACCTTTT TATTATGTTTT ACTCA AAAACATTATA TTTTTTTTGTGTAAA Cla_1104 1057514 - 1057810 + | conserved hypothetical protein, putative non-heme iron protein, hemerythrin family Cla_1105 1057878 - 1058102 + | conserved hypothetical protein, putative non-heme iron protein, hemerythrin family Cla_1106 1058170 - 1058733 + | conserved hypothetical protein, putative non-heme iron protein, hemerythrin family Cla_1107 1058744 - 1058965 + | ribbon-helix-helix protein, copG family TERM 1106 1059041 - 1059081 + F 91 -10.2 -4.22524 | gap 1, opp_overlap 1059052 1059080, overlap 1059039 1059044 TCATAGATAACTCCT TAGTTTTTAAAGATCTAGT TTTT ACTAGATCTTTAAAGA-TA TTTAGTTTTAAATAT TERM 1107 1059044 - 1059079 + F 100 -14.4 -3.70102 | opp_overlap 1059052, overlap 1059041 1059039 TAGATAACTCCTTAG TTTTTAAAGATCTAGT TTTT ACTAGATCTTTAAAGA TATTTAGTTTTAAAT TERM 1108 1059071 - 1059052 - f 82 -9.4 -3.55444 | opp_overlap 1059044 1059041 1059039 TCCTTAGTTTTTAAA GATCTAGT TTTT ACTAGATC TTTAAAGATATTTAG TERM 1109 1059369 - 1059407 + G 100 -15.4 -3.75153 | overlap 1059366 AACTTAGTTTAGTAG CAGCGTTAGCTGCAGG TGCTTTT TCAGCAGCTAACGCTG TTTCACTTGAAGAAG TERM 1110 1059705 - 1059695 - g 76 -5.4 -5.11937 | AATAACTTGAAAAAA TCTG GAA CAGA TACTCACTCAACTTT porA2 1059341 - 1060618 + | major outer membrane protein TERM 1111 1060646 - 1060627 - f 100 -12.2 -4.54821 | opp_overlap 1060627 ATTCTAATTATAAAA GCTAAGCC AAAA GGCTTAGC TTACTATATCTAAAA TERM 1112 1060627 - 1060646 + F 91 -12.2 -3.35197 | opp_overlap 1060627 ATTCTAATTATAAAA GCTAAGCC AAAA GGCTTAGC TTACTATATCTAAAA TERM 1113 1060941 - 1060957 + G 74 -6.6 -4.35116 | overlap 1060956 GTAAGTGTTTTATTT GCCAAT TCACT ATTGGC TTTTAATGTAAAATC TERM 1114 1061142 - 1061128 - g 77 -7.2 -4.33248 | TAAGTCCAGAAGAAA TCAAAG GTG CTTTGA AAGATTATGCTAATG Cla_1109 1060908 - 1061345 + | conserved hypothetical protein, putative cytochrome c family protein TERM 1115 1061600 - 1061577 - g 71 -6 -4.44974 | CTAAAGGCGATAAAA TAGAAGCAGC AAAT GCTACTACTA GACTTATCTCTCAAG livJ 1061363 - 1062475 + | branched-chain amino-acid ABC transporter, periplasmic binding protein livK 1062486 - 1063601 + | branched-chain amino-acid ABC transporter, periplasmic binding protein livH 1063622 - 1064518 + | branched-chain amino acid ABC transporter, permease protein livM 1064520 - 1065551 + | branched-chain amino-acid ABC transporter, permease protein livG 1065548 - 1066318 + | branched-chain amino acid ABC transporter, ATP-binding protein livF 1066305 - 1067000 + | branched-chain amino acid ABC transporter, ATP-binding protein TERM 1116 1067349 - 1067339 - g 88 -4 -5.81622 | overlap 1067347 AGAAAATGAAAAAAA CAAT ATC ATTG AAACTTCAAAAAGCT TERM 1117 1068540 - 1068550 + G 72 -5.4 -4.77629 | opp_overlap 1068540 CTGAAAAAAACAAGT GCTA TTT TAGC TTTTATATTAGTTTT TERM 1118 1068994 - 1068979 - g 76 -6.2 -4.55295 | TTTTTGATAAAGAAA TCATCA AGCT TGATGA AAGAGTTAATATTGT Cla_1116 1067004 - 1070234 + | cytochrome c biogenesis protein, CcmF/CycK/CcsA family TERM 1119 1070484 - 1070474 - g 70 -4 -4.94992 | overlap 1070477 TTAAATTCACAAAAA TTAG GAT CTAA CCCAAAAGATAGCGC Cla_1117 1070246 - 1070671 + | hypothetical protein lepA 1070681 - 1072471 + | GTP-binding protein LepA TERM 1120 1072473 - 1072494 + T 75 -8.8 -3.24597 | opp_overlap 1072473, overlap 1072471 TAAAAATAGACTAAA TCCCTAGT TTGTAC ACTAGGGA TATTAATTAAGCGTT TERM 1121 1072494 - 1072473 - T 84 -8.8 -4.02999 | opp_overlap 1072471 1072473 TAAAAATAGACTAAA TCCCTAGT TTGTAC ACTAGGGA TATTAATTAAGCGTT Cla_1119 1073121 - 1072501 - | hypothetical protein TERM 1122 1073012 - 1073024 + g 71 -5.5 -4.43012 | TCATCTATATCTTTT GTGCT ATT AGCGC TTTTAGTATTAGCAT TERM 1123 1073741 - 1073751 + G 76 -6.8 -4.37886 | opp_overlap 1073741 TTTTTCTTAGCACAA GCAC TAA GTGC TTTTATGGGAGCTGA TERM 1124 1074104 - 1074094 - g 72 -2.6 -5.34055 | ACAAATACTAAAAAA TATA CTC TATA ATGGCTCATCTGAAT Cla_1120 1073390 - 1074724 + | MATE efflux family protein hemD 1075343 - 1074705 - | uroporphyrinogen III cosynthase thiE 1075969 - 1075343 - | thiamine-phosphate pyrophosphorylase TERM 1125 1075833 - 1075847 + g 81 -2.8 -5.72616 | opp_overlap 1075833 GCAAGCTTGTAAAAT TCTAAG GTG CTAAGA TTTTTTTCTCTAAGT thiM 1076738 - 1075956 - | hydroxyethylthiazole kinase thiD 1077554 - 1076742 - | phosphomethylpyrimidine kinase Cla_1125 1077759 - 1078223 + | low molecular weight phosphotyrosine protein phosphatase Cla_1126 1078768 - 1078406 - | hypothetical protein gidB 1079355 - 1078762 - | glucose inhibited division protein B ribA 1079912 - 1079352 - | GTP cyclohydrolase II TERM 1126 1079832 - 1079818 - G 74 -7.2 -3.90048 | opp_overlap 1079816 1079816 1079811 1079818, overlap 1079816 TTTCCTTTAAAAATA CAAAGA TGT TCTTTG TCATTTTCTTTAAAA hemB 1079982 - 1080962 + | delta-aminolevulinic acid dehydratase Cla_1130 1080965 - 1081450 + | hypothetical protein hemN 1081437 - 1082792 + | oxygen-independent coproporphyrinogen III oxidase TERM 1127 1082900 - 1082874 - g 70 -6.5 -4.12475 | opp_overlap 1082874 TATACATGAGATAAA CCGCGATGAGA GCACT TCTCCTCGTGG TTTTTTGGATTTAAT TERM 1128 1082874 - 1082900 + G 100 -9.4 -5.22943 | opp_overlap 1082874 TATACATGAGATAAA CCGCGATGAGAG CAC TTCTCCTCGTGG TTTTTTGGATTTAAT TERM 1129 1083735 - 1083723 - g 72 -2.7 -5.36181 | overlap 1083731 AAAGAAAAAAATAAA TACAA AAA TTGCA TATCACGACCCTTGT TERM 1130 1083757 - 1083731 - g 75 -4.4 -5.30448 | opp_overlap 1083744, overlap 1083723 AAATAAATACAAAAA TTGCATATCACG ACC CTTGTCATGCAA GAAAAATGCAAGGGG Cla_1132 1082794 - 1084062 + | conserved hypothetical protein, putative iron-sulfur-cluster binding protein TERM 1131 1084079 - 1084049 - T 72 -6.2 -4.24606 | opp_overlap 1084050, overlap 1084050 AACTTATAGCTAAAA CGCTTCAAGATTAA AAA CTAATCTTGATGCT TAATATCTTCAATAT TERM 1132 1084050 - 1084078 + T 77 -9 -3.38207 | opp_overlap 1084049 1084050 ACTTATAGCTAAAAC GCTTCAAGATTA AAAAC TAATCTTGATGC TTAATATCTTCAATA TERM 1133 1084078 - 1084050 - T 78 -9.7 -3.1404 | opp_overlap 1084050, overlap 1084049 ACTTATAGCTAAAAC GCTTCAAGATTAA AAA CTAATCTTGATGC TTAATATCTTCAATA Cla_1133 1084275 - 1084066 - | hypothetical protein alr 1085320 - 1084313 - | alanine racemase Cla_1135 1086291 - 1085320 - | hypothetical protein TERM 1134 1085917 - 1085899 - G 70 -6 -4.19735 | TGTTGCAAAAGCAAA TGGTCCAT AAT ATGGATCA CCAGGATAAAATTTC TERM 1135 1086229 - 1086244 + g 72 -7.6 -3.57144 | ATTTAAATAAATTTT TGCAAG ATCA CTTGCA TTTACAAATACAACC Cla_1136 1086419 - 1086838 + | conserved hypothetical protein (DUF461 domain protein) Cla_1137 1086838 - 1087284 + | hypothetical protein Cla_1138 1087288 - 1087845 + | conserved hypothetical protein, probable SCO1/SenC family protein TERM 1136 1087863 - 1087839 - T 81 -8.8 -3.68853 | opp_overlap 1087839, overlap 1087831 TCAAAAATTCTTAAA CGAATAAATT ATAAA AATTTATTCG TTTCTTAAAGTATCT TERM 1137 1087839 - 1087863 + T 86 -8.8 -4.2008 | opp_overlap 1087839 1087831 TCAAAAATTCTTAAA CGAATAAATT ATAAA AATTTATTCG TTTCTTAAAGTATCT Cla_1139 1089059 - 1087857 - | conserved hypothetical integral membrane protein, putative permease Cla_1140 1089568 - 1089122 - | hypothetical protein Cla_1141 1090062 - 1089544 - | conserved hypothetical lipoprotein (DUF400 domain protein) TERM 1138 1089803 - 1089791 - G 72 -7.7 -3.64703 | GCTCTTTTAGCTAAA GCCAA AGC TTGGC CAACAGAAACTGTAT gyrA 1092699 - 1090123 - | DNA gyrase, subunit A Cla_1143 1093308 - 1092736 - | conserved hypothetical protein, possible purine/pyrimidine phosphoribosyltransferase TERM 1139 1092818 - 1092798 - G 70 -6.1 -4.07885 | opp_overlap 1092802 1092803 TATTTTTTTCTAAAA GCTCTCTTG CTT CAAGCAAGC TTAATCCCGTAGTTA TERM 1140 1092803 - 1092817 + g 70 -8.6 -2.50291 | opp_overlap 1092798, overlap 1092802 TTTTCTAAAAGCTCT CTTGCT TCA AGCAAG CTTAATCCCGTAGTT TERM 1141 1093285 - 1093245 - G 72 -6.3 -4.21314 | overlap 1093246 AAGAATATTCTAAAA GTTCTTCTTTGCAAGCT GGACAAA AGCTTGCAAAGGAAAAT CCATGACAGCTAAAA TERM 1142 1093284 - 1093246 - G 78 -9.8 -3.11704 | overlap 1093245 AGAATATTCTAAAAG TTCTTCTTTGCAAGCT GGACAAA AGCTTGCAAAGGAAAA TCCATGACAGCTAAA mapA 1093952 - 1093305 - | outer membrane liproprotein MapA Cla_1145 1094158 - 1095519 + | conserved hypothetical protein, putative sodium/sulfate transporter TERM 1143 1095520 - 1095548 + T 100 -13.4 -3.57971 | TTGTTTTGGCTTTAA TCTTTTTAGTCC TTCTT GGACTAAAAAGA TTTACAAATACATCT Cla_1146 1096152 - 1095550 - | thiamine-phosphate pyrophosphorylase/regulatory protein TenI, putative thiH 1097275 - 1096142 - | thiamine biosynthesis ThiGH complex, ThiH subunit thiG 1098035 - 1097277 - | thiamine biosynthesis ThiGH complex, ThiG subunit thiF 1098832 - 1098035 - | ThiS adenylation protein ThiF thiS 1099023 - 1098832 - | thiamine biosynthesis protein ThiS Cla_1151 1099815 - 1099057 - | hypothetical protein dapE 1101050 - 1099950 - | N-succinyl-diaminopimelate deacylase Cla_1153 1101647 - 1101054 - | conserved hypothetical integral membrane protein, putative transporter, LysE family Cla_1154 1102339 - 1101641 - | conserved hypothetical protein, putative NAD-dependent deacetylase TERM 1144 1102187 - 1102205 + g 76 -5.4 -5.06414 | opp_overlap 1102187 1102189, overlap 1102189 TCTTTTGTTATAAAA TTCTAAAA CTT TTTTAGGA TTTTTCTTAAAGCCA mutS 1104543 - 1102348 - | mismatch repair ATPase MutS, MutS2 family Cla_1156 1104890 - 1104543 - | hypothetical protein murC 1106175 - 1104883 - | UDP-N-acetylmuramate--alanine ligase Cla_1158 1106975 - 1106184 - | hydrolase, carbon-nitrogen family TERM 1145 1106598 - 1106615 + g 75 -4.3 -5.1963 | TTTAAGCTTATCAGT TTTTTTA TTGT TAAAAAA TTTTTCTTCATTCCA TERM 1146 1106670 - 1106698 + g 71 -2.4 -5.40474 | overlap 1106672 TTGCTCGTAATTTTT AATGCCTTGAGG ATTTA CCTTAATGCATA TTTTTTTAAAACCAT TERM 1147 1106764 - 1106783 + g 73 -3.6 -5.22312 | AAATCATATTTTTTA GAAAGCTT GATC AAACTTTC TTTTTTACTCTCACT TERM 1148 1106810 - 1106827 + g 70 -4.1 -4.88407 | overlap 1106811 CACTTTGTTCTTTTA TCATGCT TTTT GGCATGG TTTTTAATTCACTAA guaB 1108592 - 1107141 - | inosine-5'-monophosphate dehydrogenase gatA 1109967 - 1108603 - | glu-tRNAGln amidotransferase, subunit A TERM 1149 1109255 - 1109266 + g 78 -4.4 -5.34381 | opp_overlap 1109255 TAATTTTTAATTACA GCTA TTTT TAGC TTTTTATTTGCATTT ileS 1112832 - 1110067 - | isoleucyl-tRNA synthetase TERM 1150 1111365 - 1111377 + g 74 -3.4 -5.4251 | opp_overlap 1111365, overlap 1111358 CATCATCATCAAAAA TCAC CTCTT GTGA TTTTTTATCTCTAAA TERM 1151 1111986 - 1112002 + g 76 -5.2 -5.15167 | AAAGCTCTTTTTGAA TTTCAC CTTGA GTGAAA TTTTTATTGATCATA TERM 1152 1112341 - 1112353 + g 78 -6.3 -4.77036 | opp_overlap 1112340 AGCTTTGTAAATATC TGCTT CAA AAGCA TTTTTCATAGTCAAG Cla_1162 1112933 - 1114024 + | competence/damage-inducible protein, CinA family Cla_1163 1114568 - 1114071 - | conserved hypothetical protein, possible lipoprotein thioredoxin TERM 1153 1114544 - 1114523 - GT 83 -2.3 -5.99154 | overlap 1114524 CACTAAAGAAAAAAA TGCTTATTA AAGC CAAGAAGCA ATAGAAGCTTTTAGT Cla_1164 1115020 - 1114529 - | conserved hypothetical protein, possible lipoprotein thioredoxin Cla_1165 1115666 - 1115010 - | ABC transporter, ATP-binding protein Cla_1166 1116781 - 1115666 - | ABC transporter, permease protein TERM 1154 1116031 - 1116051 + g 81 -5.5 -5.24129 | opp_overlap 1116031 AAATCGTTAAGCTAA TCAAAGC CATTAAA GCTTTGA TTTTTTCTAAAACCA TERM 1155 1116760 - 1116739 - G 74 -2.3 -5.55769 | overlap 1116742 TTTTATAAGAAAAAA TAAGAGATT TAAA AACCTCTTG CATAAAAAAATTATT Cla_1167 1118063 - 1116771 - | ABC transporter, permease protein Cla_1168 1119474 - 1118053 - | conserved hypothetical integral membrane protein (YHS domain protein) TERM 1156 1119025 - 1119004 - G 90 -6.1 -5.50774 | opp_overlap 1119003 1119008 GATAACAAATAAAAA TAAATTTAA AAAC TTAAATTTA AATTCTCTTAGCCAC TERM 1157 1119429 - 1119416 - G 77 -4.5 -5.27709 | TTATAAAAAAATAAA GCACT CAAA AGCGC ATAAGAAAAAAATGC TERM 1158 1119526 - 1119494 - R 74 -8.1 -3.48276 | TCTTCTTTGATAGAA TTTATTTATAAAATC GAT AATTTCATAAATAAA CCCTAGCAAAAGCTA TERM 1159 1119544 - 1119527 - R 100 -11.3 -4.56969 | AATTTCATAAATAAA CCCTAGC AAAA GCTAGGG TAAAAATCACTTCGG p19 1120072 - 1119551 - | 19 kDa periplasmic protein Cla_1170 1122144 - 1120069 - | iron permease, FTR1 family TERM 1160 1120127 - 1120113 - G 72 -5 -4.82901 | GCTTTGTTATAAAAA TACCCA TAA TGAGTA AGATTAAAACCATAA TERM 1161 1121767 - 1121784 + g 75 -5.6 -4.82901 | opp_overlap 1121783, overlap 1121762 TACATCACTAGCTTC GGCTTT AAGCTG AAAGCC TTTTTCTAAAACAGG Cla_1171 1123672 - 1122815 - | D-amino acid aminotransferase Cla_1172 1124661 - 1123684 - | conserved hypothetical protein, putative lipopolysaccharide core biosynthesis protein Cla_1173 1124791 - 1125282 + | hypothetical protein Cla_1174 1126193 - 1125279 - | hypothetical protein mraW 1127114 - 1126197 - | S-adenosyl-methyltransferase MraW Cla_1176 1127176 - 1127754 + | hypothetical protein TERM 1162 1128765 - 1128753 - g 72 -7.7 -3.65068 | opp_overlap 1128751 1128753 ATAAAAATATCACAA TCAGC GAT GCTGA TGTTTATTATCCTTT TERM 1163 1128753 - 1128765 + G 74 -7.7 -3.80515 | opp_overlap 1128753, overlap 1128751 ATAAAAATATCACAA TCAGC GAT GCTGA TGTTTATTATCCTTT TERM 1164 1128972 - 1128962 - g 71 -3.2 -5.22006 | TTATTAGAAGAAAAA GCAA AAA TCGC CCTAGATAATTTCCA Cla_1177 1127834 - 1129312 + | conserved hypothetical protein, putative peptidyl-prolyl cis-trans isomerase D TERM 1165 1129366 - 1129346 - g 81 -8.3 -4.19624 | overlap 1129347 TAGGCTCAATACAAA CTTGCGCCA TAT TAGCGCAAA AAAGCGAAGAAGGAC TERM 1166 1129365 - 1129347 - g 78 -9.6 -3.11292 | overlap 1129346 AGGCTCAATACAAAC TTGCGCCA TAT TAGCGCAA AAAAGCGAAGAAGGA TERM 1167 1129457 - 1129429 - g 78 -3.1 -5.63504 | overlap 1129432 1129443 AATGGTATAAAAAAA GGAGCAATTACTA ATA TAGAACTTGCTTC AAAATCCATAGAAGA ftsA 1129309 - 1130688 + | cell division protein FtsA TERM 1168 1130916 - 1130905 - g 82 -4.4 -5.626 | TAGGTGAGAAAAAAA CCAA AGGC TTGG GTGCTGGAATGCAAC ftsZ 1130700 - 1131806 + | cell division protein FtsZ TERM 1169 1131868 - 1131903 + G 73 -9.2 -2.53888 | opp_overlap 1131867, overlap 1131861 1131867 1131865 1131898 TTACGAACTAAGTAT GGCTTATGCTTATTTT AAAC AAAATATGCATAAGCA GATTGTTTATTTTGA TERM 1170 1132313 - 1132338 + G 71 -5.5 -4.45517 | GCTCATGGAGAAAGT GCAGCTTTA AATGGTGC TAGAGCTGC TTTTATAGGTGGTTT pncB 1131827 - 1133203 + | nicotinate phosphoribosyltransferase ispG 1134257 - 1133187 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase priA 1136158 - 1134314 - | primosomal protein N' TERM 1171 1135567 - 1135580 + g 85 -2.4 -6.13503 | AATTTGCCAAATCTT GCAA ACATTC TTGC TTTTTTTTCTTAGTA Cla_1183 1136625 - 1136155 - | N-terminal methylation domain protein Cla_1184 1136865 - 1136626 - | hypothetical protein Cla_1185 1137085 - 1136852 - | hypothetical protein TERM 1172 1138391 - 1138409 + G 74 -6.2 -4.44046 | opp_overlap 1138391 TGATGAATTTATTAA TAAAAATT GTA AATTTTTA TTTGTTTCAGCTACA uvrB 1137240 - 1139213 + | excinuclease ABC, subunit B TERM 1173 1139211 - 1139233 + T 100 -12.2 -4.59293 | opp_overlap 1139206 1139214 AAATTAAGAACTTTA TAATCCCTTA AAA TAAGGGATTA TTTATTTGCTCTTTC TERM 1174 1139230 - 1139214 - T 80 -9.5 -3.39749 | opp_overlap 1139211, overlap 1139206 TTAAGAACTTTATAA TCCCTTA AAA TAAGGGA TTATTTATTTGCTCT efp 1139800 - 1139231 - | translation elongation factor EF-P TERM 1175 1139844 - 1139830 - R 90 -5.8 -5.46698 | opp_overlap 1139808 1139841 1139842, overlap 1139842 TTTAAAATTAAAAAA TAATTG TAA CAATTA AGGCTTATAAAAAGC TERM 1176 1139864 - 1139842 - R 81 -9.3 -3.71353 | opp_overlap 1139808 1139842 1139841, overlap 1139830 1139860 AAATAATTGTAACAA TTAAGGCTT ATAAA AAGCCTTAA ATTTCTGCATATTCT TERM 1177 1139842 - 1139864 + r 74 -9.3 -2.98582 | opp_overlap 1139830 1139842 1139860, overlap 1139808 1139841 AAATAATTGTAACAA TTAAGGCTT ATAAA AAGCCTTAA ATTTCTGCATATTCT serA 1141441 - 1139861 - | D-3-phosphoglycerate dehydrogenase Cla_1189 1141917 - 1141438 - | hypothetical protein rpsA 1143591 - 1142038 - | 30S ribosomal protein S1 TERM 1178 1143282 - 1143294 + g 82 -6.3 -5.24129 | ATTCTTTAACTTTTT GCTTT CTT AAAGC TTTTTTATGAGAAAG ispH 1144483 - 1143647 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase aroA 1145759 - 1144473 - | 3-phosphoshikimate 1-carboxyvinyltransferase pheT 1148086 - 1145756 - | phenylalanyl-tRNA synthetase, beta subunit TERM 1179 1146390 - 1146402 + g 81 -4.9 -5.43553 | AAAACACTGCCACAT TCAAA AAG TTTGA TTTTCTTTTTTGAAT pheS 1149075 - 1148083 - | phenylalanyl-tRNA synthetase, alpha subunit Cla_1195 1149160 - 1149525 + | HIT family hydrolase TERM 1180 1149550 - 1149517 - T 78 -9.9 -2.73542 | gap 1, opp_overlap 1149548, overlap 1149529 GTCAATCCCGAATCA CTATTCTAAAAAGAGC TTA ACTCTTTTTAG-ATAG CAGGACCAGCTAATT pckA 1151117 - 1149543 - | phosphoenolpyruvate carboxykinase pycB 1152906 - 1151128 - | pyruvate carboxylase, subunit B TERM 1181 1152575 - 1152587 + g 71 -4.9 -4.71061 | ATAGTAGTTGTTCCA TGTTT TGC AAACA TTTTTGCATGTAAAT Cla_1198 1154299 - 1152965 - | sodium- and chloride-dependent transporter, SNF family TERM 1182 1153207 - 1153196 - G 78 -4.4 -5.37593 | overlap 1153204 GCTTAAACCAAAAAA GCTA AAAC TAGC CCCATAACTGGCACT TERM 1183 1154204 - 1154187 - G 71 -4.9 -4.70046 | TACAAAAGCACAAAA GCAAAAC CACC ATTTTGC CCTACTAAGGTTGGA Cla_1199 1155646 - 1154309 - | sodium- and chloride-dependent transporter, SNF family TERM 1184 1154377 - 1154359 - G 76 -7.6 -3.97368 | CTGCTAATGGAGAAA TATATCTT AAA AAGATATA CCAAATTTCAAAATA TERM 1185 1154540 - 1154529 - G 83 -3 -5.69023 | opp_overlap 1154532 AAAATATCAAAAAAA CTTT TTCC AAAG AAATTTAAACTTGGC Cla_1200 1157008 - 1155656 - | sodium- and chloride-dependent transporter, SNF family atpE 1157204 - 1157527 + | ATP synthase F0 sector, C subunit Cla_1203 1157664 - 1158104 + | hypothetical protein Cla_1204 1158165 - 1159460 + | MCP-domain signal transduction protein TERM 1186 1159491 - 1159458 - T 95 -11.3 -3.97947 | opp_overlap 1159463, overlap 1159463 GCTATGCAGGATAAA TAAAAGTTTTTAGCT TAAA AGCTAAAAACTTTTT CCTGCTATAAAGCTT TERM 1187 1159486 - 1159463 - T 100 -11.2 -5.02323 | opp_overlap 1159463, overlap 1159458 GCAGGATAAATAAAA GTTTTTAGCT TAAA AGCTAAAAAC TTTTTCCTGCTATAA TERM 1188 1159463 - 1159486 + T 100 -11.2 -4.79223 | opp_overlap 1159463 1159458 GCAGGATAAATAAAA GTTTTTAGCT TAAA AGCTAAAAAC TTTTTCCTGCTATAA pyrC2 1160636 - 1159479 - | dihydroorotase gpsA 1161535 - 1160633 - | glycerol 3-phosphate dehydrogenase TERM 1189 1161048 - 1161012 - G 74 -8.1 -3.56092 | GCATTATTGCCTAAA TTTAAGCCATCGCAAAC TCC GCTTGCAATCGCTAAAA CATTCTTATATGCAC gatB 1162956 - 1161538 - | glu-tRNAGln amidotransferase, subunit B TERM 1190 1161875 - 1161900 + g 70 -6.1 -4.11394 | TTTTCTTGTTTTATA GGTGAGTTTTC TATA GTTAACTCACC TTTTAAAAGTCCCAT TERM 1191 1162892 - 1162904 + g 77 -4.9 -5.23644 | opp_overlap 1162881 GAAGTTGCACATGAG CAAAA GAT TTTTG TTTTTGTATTTAATT TERM 1192 1163053 - 1163070 + r 78 -7.1 -4.62872 | opp_overlap 1163053 TAAAAAAGAAAAAAA GCAAAAA ATAT TTTTTGC TTTTTAAAAATTAAT TERM 1193 1163070 - 1163053 - R 100 -7.1 -6.28401 | opp_overlap 1163053 TAAAAAAGAAAAAAA GCAAAAA ATAT TTTTTGC TTTTTAAAAATTAAT atpB 1163761 - 1163081 - | ATP synthase F0 sector, A subunit TERM 1194 1163530 - 1163511 - G 70 -5 -4.62069 | opp_overlap 1163503, overlap 1163503 AAAAACACTATAAAA CCTATAGT TGCT ACTAAAGG CAAATATTTTCTTGC Cla_1209 1165332 - 1163824 - | conserved hypothetical protein, FAD-binding domain protein radA 1166663 - 1165323 - | DNA repair protein RadA TERM 1195 1166639 - 1166651 + g 81 -4.9 -5.48303 | CACATGCTTGGCATT CAAAT AAA ATTTG TTTTTTTGCCATTAT ftsY 1167529 - 1166663 - | signal recognition particle-docking GTPase FtsY Cla_1212 1168074 - 1167529 - | conserved hypothetical lipoprotein TERM 1196 1168542 - 1168572 + GH 72 -6.3 -4.25754 | opp_overlap 1168542, overlap 1168537 AGGGTTTTTACGATA GGTTTTTTGAAAG CATTT CTTATAAAAAACC TTTGGTTATTTTTAC Cla_1213 1168142 - 1168771 + | conserved hypothetical protein, 5-formyltetrahydrofolate cyclo-ligase family TERM 1197 1168877 - 1168865 - gf 76 -6.3 -4.6856 | opp_overlap 1168865 TAAAGATGCTAAAAA TTCAG TTG CTGAA GCTGAATTTACAGCA TERM 1198 1168913 - 1168902 - gf 83 -3 -5.69793 | ACAGCAAAGAAAAAA TTTG ATGA CAAA ATTCAAAAACTGCAA TERM 1199 1168965 - 1168937 - gf 71 -8.4 -3.02233 | ACTGCAAAAAGAGCA TTCTATTAAGCT AGAAG AGCTTAATAAAA AAGAACAAAACCTTC TERM 1200 1169195 - 1169183 - gf 70 -4.1 -4.88258 | opp_overlap 1169183 1169188 1169192, overlap 1169188 AAAAGTAGAAGAAAA CTCAA GAG CTGAG ATTGCTCATATTGTT Cla_1214 1168695 - 1170248 + | conserved hypothetical protein, HDIG/HD/KH domain protein TERM 1201 1170477 - 1170467 - g 74 -3.2 -5.38321 | overlap 1170460 AAATATTATAAAAAA GACA TAA TGCC TTATTTTAAAAATCA TERM 1202 1170696 - 1170735 + G 73 -8.2 -3.52652 | gap 1, opp_overlap 1170703, overlap 1170703 ATGCTGGTTTTATTT TTGG-AAATACCTTAAAAG AAG CTTTTGAAGTATTTACCAA TTATCCTTACATAGC Cla_1215 1170257 - 1170820 + | hypothetical protein TERM 1203 1170829 - 1170855 + GT 87 -3.9 -5.95449 | opp_overlap 1170829, overlap 1170819 AAAATGAGTTTAAAA TTCTCTATA AAAGAAACC TATAGAGAA TTTTTTATTTTATTT rbn 1172832 - 1172020 - | tRNA-processing ribonuclease BN Cla_1216 1170817 - 1172073 + | conserved hypothetical protein, putative ComEC/Rec2-related protein domain protein glcD 1174214 - 1172832 - | glycolate oxidase Cla_1219 1174933 - 1174214 - | hypothetical protein Cla_1220 1175052 - 1176209 + | peptidase, M23/M37 family TERM 1204 1177477 - 1177457 - g 76 -6.2 -4.57275 | overlap 1177459 TAAAAAAATTTAAAA TCGATCCT GCGGT AGGATCAA GCGTAGTGATCACTG Cla_1221 1176211 - 1177554 + | Mg/Co/Ni transporter, MgtE family tpx2 1177566 - 1178084 + | thiol peroxidase dnaB 1179466 - 1178081 - | replicative DNA helicase cysK 1180381 - 1179479 - | cysteine synthase A TERM 1205 1180469 - 1180447 - R 100 -13.6 -5.14163 | ATCTATGAAGAAAAA CGCAAAAGTT AGA AACTTTTGCG CAAAAAATTATTTTT hup 1180779 - 1180477 - | DNA-binding protein HU waaF 1181786 - 1180872 - | lipopolysaccharide heptosyltransferase II TERM 1206 1180989 - 1181001 + g 76 -6.3 -4.63218 | opp_overlap 1180988 AGCTAAATTTAAATG TGCTA TTT TAGCA TTTTCTTGCCAAGGC TERM 1207 1181404 - 1181420 + g 77 -5.9 -4.9792 | opp_overlap 1181395, overlap 1181395 1181385 AAAGCATTTGAAGTG GCTTTAA AAT TTAAGGC TTTTTCTATGAAATC TERM 1208 1182549 - 1182535 - g 81 -2.8 -5.82172 | ATGAAGATAAAAAAA GAAGCT TTG AGCTTA TAAAAAATCTTTCAA waaV 1181835 - 1182647 + | lipooligosaccharide biosynthesis glycosyltransferase ptmA 1183406 - 1182642 - | flagellin modification protein PtmA, putative oxidoreductase ptmB 1184113 - 1183406 - | flagellin modification protein PtmB, acylneuraminate cytidylyltransferase TERM 1209 1183979 - 1183994 + g 71 -4.8 -4.75776 | GCTAATTACTATATG TTCAAA AAGG TTTGAA TTTTTAGCTTGGATT ptmF 1184996 - 1184106 - | flagellin modification protein PtmF TERM 1210 1184227 - 1184237 + g 72 -2.6 -5.47914 | GTTTTTATAGTATCA TTTT CAT AAAA TTTTTTATCATTTTT ptmE 1186030 - 1184993 - | flagellin modification protein PtmE, putative sugar-phosphate nucleotide transferase TERM 1211 1185824 - 1185834 + g 72 -2.6 -5.43487 | AACTAATATAGGATT TTTA GTA TAAA TTTTTTCTATACTTT Cla_1232 1186712 - 1186041 - | LmbE-like protein Cla_1233 1187615 - 1186722 - | conserved hypothetical protein, putative formyltransferase TERM 1212 1186794 - 1186804 + g 85 -2.6 -5.9362 | overlap 1186800 AGCTCCATTATATGT TTTT ACT AAAA TTTTTTTATCTTTTA TERM 1213 1187507 - 1187494 - G 78 -3.1 -5.63374 | CTAATATCAAAAAAA TCGCT ATTA AACGA AGACTCTCTCATAGT ptmD 1188784 - 1187612 - | flagellin modification protein PtmD, putative UDP-N-acetylglucosamine 2-epimerase TERM 1214 1188561 - 1188535 - G 74 -7.5 -3.89215 | opp_overlap 1188531 1188552 CTTCACAAAGTGAAA TTTGTAAAAGC CCCAT ACTTTTACAAA GTGCTATATTATCAT ptmC 1189781 - 1188777 - | flagellin modification protein PtmC, putative N-acetylneuraminic acid synthetase TERM 1215 1189549 - 1189562 + g 73 -3.9 -5.20216 | ATTTCATGATCTTGC TTAGA AAGT TCTAA TTTTTTAATCATATC Cla_1236 1190687 - 1189797 - | formyltransferase, putative Cla_1237 1191731 - 1190724 - | NAD-dependent epimerase/dehydratase family protein Cla_1239 1192633 - 1192782 + | hypothetical protein, CgtB glycosyltransferase fragment TERM 1216 1192996 - 1192975 - g 72 -4.6 -4.93318 | opp_overlap 1192977 TATAATGTAGAAAAA TATCTAAA AGAATG TTTAGATA GTGTAATCAATCAAA TERM 1217 1193635 - 1193609 - g 71 -2.4 -5.41143 | opp_overlap 1193614, overlap 1193614 CACTTCTTAAAAAAA TAAAATTATCAT TTA AAGATAATATTA TTGGAGAGGATAGGG TERM 1218 1193630 - 1193614 - g 74 -2.3 -5.55855 | opp_overlap 1193614, overlap 1193609 CTTAAAAAAATAAAA TTATCAT TTA AAGATAA TATTATTGGAGAGGA TERM 1219 1193947 - 1193915 - g 74 -5.1 -4.92363 | opp_overlap 1193893 AAATATGCAGAAAAA TTTTTATACCATCAT TTT ATAATAGTATTAAAA AAGATTATTTAAAAT TERM 1220 1194036 - 1194080 + G 91 -4 -6.14618 | gap 1, opp_overlap 1194048, overlap 1194048 TGAATTTTGTGGTAA TAAATCAAAAAACTTATTTTT TTTA AAAAATAAGT-TTTTGTTTAA TTTTTTTATTTTATG TERM 1221 1194048 - 1194069 + G 90 -7.5 -5.43974 | opp_overlap 1194048, overlap 1194036 TAATAAATCAAAAAA CTTATTTTT TTTA AAAAATAAG TTTTTGTTTAATTTT TERM 1222 1194069 - 1194048 - g 90 -7.5 -5.46129 | opp_overlap 1194048 1194036 TAATAAATCAAAAAA CTTATTTTT TTTA AAAAATAAG TTTTTGTTTAATTTT Cla_1240 1192930 - 1194135 + | glycosyltransferase TERM 1223 1194755 - 1194731 - g 90 -3.7 -6.18768 | AAAATATAAAAAAAA TACAAACTTTT AAT AAATGTTTATA TAATTACAATTGCGA Cla_1241 1194139 - 1195059 + | glycosyltransferase Cla_1242 1196218 - 1195049 - | glycosyltransferase TERM 1224 1195512 - 1195522 + g 72 -2.6 -5.43621 | GCAAAAATACCATCT TTAA ATT TTAA TTTTTTATCATTTAT TERM 1225 1196258 - 1196238 - H 71 -8.5 -2.76721 | opp_overlap 1196236 1196235 ACATAACCTTAATTA TTTTTGATA TTA TATCAAAAA AACTTTTTAGGAATT TERM 1226 1196503 - 1196485 - g 83 -3.2 -5.76949 | overlap 1196487 GATTTTGAAAAAAAA CATCATTT TAA AAACGATA AAATCATTTGGCAAT TERM 1227 1197282 - 1197248 - g 100 -13.2 -2.82112 | opp_overlap 1197257, overlap 1197245 1197250 1197252 1197257 AAAAAGATTCAATGA TAGATAAAATCATCTT GCA AAGTTGATTTTATCTA AAAATACCTTTTATT Cla_1243 1196278 - 1197273 + | glycosyltransferase TERM 1228 1197280 - 1197250 - T 85 -11.4 -2.9428 | opp_overlap 1197257, overlap 1197248 1197245 1197252 1197257 AAAGATTCAATGATA GATAAAATCATCTT GCA AAGTTGATTTTATC TAAAAATACCTTTTA Cla_1244 1198430 - 1197276 - | glycosyltransferase Cla_1245 1199981 - 1198434 - | putative two-domain glycosyltransferase TERM 1229 1199273 - 1199262 - G 70 -3.6 -5.14477 | CATATATTTAAAAAA GGCC CCAA GACC ATTGCAAGTACTTAT htrB 1200862 - 1199990 - | putative lipid A biosynthesis lauroyl acyltransferase waaC 1201878 - 1200859 - | lipopolysaccharide heptosyltransferase I wlaX 1201944 - 1202723 + | conserved hypothetical protein, putative polysaccharide biosynthesis protein TERM 1230 1203122 - 1203133 + G 74 -3 -5.4505 | GTTTAGAAACAGGTG TGAA AAAA TTCA TTTTTTCTTCAACCG galE 1202782 - 1203768 + | UDP-glucose 4-epimerase TERM 1231 1203906 - 1203925 + G 74 -9.4 -2.79272 | opp_overlap 1203903, overlap 1203905 1203903 1203908 GTAGCGAGTAATTTT GAGCTTTT AGAA AAAAGCTC CTATTTTCAACCTAT pglK 1203762 - 1205456 + | ABC transporter, ATP-binding protein/permease, glycan transport pglH 1205453 - 1206517 + | GalNAc alpha-1,4-transferase TERM 1232 1206951 - 1206939 - g 75 -4.9 -5.14563 | TTTCTTATTAAAAAA CTTTA TAA TAAAG CAGATTTAATCTTAG TERM 1233 1207332 - 1207348 + G 70 -3.7 -5.02201 | overlap 1207333 GACTTTTTTGCTTTT GCTTCAA GTT TTGAAGG TTTTTCTAATGTTTT pglJ 1206519 - 1207619 + | GalNAc alpha-1,4-transferase pglB 1207621 - 1209759 + | oligosaccharide transferase to N-glycosylate proteins TERM 1234 1210495 - 1210524 + G 81 -3.6 -5.63517 | opp_overlap 1210488, overlap 1210468 1210488 1210497 ATAATAAATCATGTG CTTCACTTGAGT ATTTAA ATTCAGGTGATG TTTTTTATTTGGGCG TERM 1235 1210653 - 1210630 - g 76 -9.7 -2.60688 | opp_overlap 1210632 1210635, overlap 1210621 1210629 1210632 1210635 GAACGATTTTAGAAG CACAAGCTT GTAAAA AAGCTTGTG TGGTAAGTGATGCTG pglA 1209756 - 1210883 + | GalNAc alpha-1,3-transferase TERM 1236 1211200 - 1211210 + GF 79 -8.2 -4.00124 | GATATGAGTTTTATA GGCC CAA GGCC TTTGCTTGTAGAGTA pglC 1210876 - 1211478 + | galactosyltransferase TERM 1237 1211796 - 1211775 - gf 75 -8.9 -3.25088 | overlap 1211779 TGCCAAATGTAGTAA TTAATGCTA AAGC TAGCATTAA AAAAGGCGTGATTTT pglD 1211444 - 1212058 + | UDP-4-amino-sugar N-acetyltransferase TERM 1238 1212231 - 1212219 - g 71 -7.7 -3.53811 | overlap 1212223 TGCACTTGCGCTAAA TGCAG CTA CTGCA GCCATTCATCTAGCT pglE 1212058 - 1213218 + | UDP-4-keto-6-deoxy-GlcNAc C4 aminotransferase TERM 1239 1213259 - 1213238 - g 70 -5.8 -4.28487 | opp_overlap 1213237 GATTATAAAAGCAAA CGCTTAGG TTTTTT CCTAGGCG CTGATATATTACTTT TERM 1240 1214768 - 1214730 - g 86 -6.3 -5.40474 | ATTTGGCTAAAAAAA TGCTTTTACTTTCTAAT AAAAA ATTAGAAATTAAAATCA CCGGACTAAGAAAAG TERM 1241 1214891 - 1214873 - g 77 -7.6 -4.08887 | ACTAGTGAAATTAAA GATTTAAA AAT TTTAAATC AAGAAATAGAACGAT pglF 1213220 - 1214983 + | UDP-GlcNAc C4,6 dehydratase TERM 1242 1215079 - 1215049 - f 86 -4.8 -5.74684 | opp_overlap 1215057, overlap 1215057 TAATAAAAATAAAAA CGGTACAATTACAT CTT ATGTAATTAGATCG AAATAAAGGAAAAAA cheY 1215096 - 1215473 + | chemotaxis protein CheY TERM 1243 1215977 - 1215997 + G 81 -9.7 -3.41051 | opp_overlap 1215977 CATCATCATGGCAAA GCTTGGAGC TAA GGTCCAAGC TTGTGATACCGATGA TERM 1244 1215997 - 1215977 - g 83 -9.7 -3.62572 | opp_overlap 1215977 CATCATCATGGCAAA GCTTGGAGC TAA GGTCCAAGC TTGTGATACCGATGA prmA 1215486 - 1216322 + | ribosomal protein L11 methyltransferase TERM 1245 1217971 - 1217961 - g 70 -4 -4.85782 | opp_overlap 1217961 TGCTTGAAAAACAAA GAAA TAC TTTC TTAAGTGGTGGACAA ftsH2 1216322 - 1218244 + | cell division protein FtsH Cla_1262 1218244 - 1218861 + | phosphatidylserine decarboxylase related protein pssA 1218858 - 1219568 + | CDP-diacylglycerol--serine O-phosphatidyltransferase Cla_1264 1219634 - 1220188 + | hypothetical protein TERM 1246 1220196 - 1220222 + F 76 -8.2 -3.76413 | opp_overlap 1220190, overlap 1220189 GTGTATAAATTTAAG GTATATCTTATA AAG TTTAAGATATAC TTTCAACTTTTAAGG TERM 1247 1220282 - 1220260 - f 77 -8.4 -3.54424 | overlap 1220263 GGTGAGTGGCTGAAA CCACACCCCT GCT AAGGGTGCAG ATCTTAACGGGTCTC TERM 1248 1220279 - 1220263 - f 71 -8.7 -2.90813 | overlap 1220260 GAGTGGCTGAAACCA CACCCCT GCT AAGGGTG CAGATCTTAACGGGT TERM 1249 1221012 - 1221001 - g 70 -4.4 -4.87328 | TATACAAATATAAAA TGTG GGCA CACA AGCCATTAAAAGATT TERM 1250 1221699 - 1221687 - g 74 -3.4 -5.4593 | GCAAAAGAAGAAAAA TTGC AAAAA GCAA GACTTCAAATTATGC Cla_1266 1220340 - 1221806 + | UV damage repair protein, ImpB/MucB/SamB family TERM 1251 1221895 - 1221878 - g 72 -2.7 -5.47159 | overlap 1221871 TGCCAAGAGAAAAAA GAGCA GCTCAATT TGCTC CATTTTCAGTATTAA Cla_1267 1221799 - 1221987 + | hypothetical protein ciaB 1223826 - 1221991 - | invasion antigen B Cla_1269 1223891 - 1224295 + | conserved hypothetical protein, putative acyl-coA thioester hydrolase prsA 1224360 - 1225289 + | ribose-phosphate pyrophosphokinase TERM 1252 1225318 - 1225291 - f 100 -15.8 -3.87815 | CTTTATTTGTATAAA TTCTTTGCAAGG TAAT CCTTGCAAAGAA AATCTAAACTTCCAA Cla_1271 1225409 - 1225630 + | hypothetical protein Cla_1273 1225905 - 1225861 - | tmRNA proteolysis tag Cla_1274 1226405 - 1225995 - | hypothetical protein TERM 1253 1226249 - 1226267 + g 70 -6 -4.32763 | CATTATGAATATTTT GCTCTAGA TCT TTTAGGGC TTCTTTGTATTTTGA ruvB 1226497 - 1227507 + | Holliday junction DNA helicase, ATPase motor protein amaA 1227497 - 1228540 + | acid membrane antigen A TERM 1254 1228565 - 1228542 - T 71 -6.8 -3.87641 | overlap 1228543 AACATTTTGTATAAA GGCGATTATT TTTC AATAATCGCT AAAATTTCTTCTTCG TERM 1255 1228564 - 1228543 - T 79 -10.3 -2.92102 | overlap 1228542 ACATTTTGTATAAAG GCGATTATT TTTC AATAATCGC TAAAATTTCTTCTTC Cla_1277 1229848 - 1228547 - | major facilitator superfamily transporter TERM 1256 1229626 - 1229637 + g 74 -3 -5.41143 | TAAACACTACAAGTC CTAT TAGC ATAG TTTTTTTACGCCCTA TERM 1257 1230396 - 1230406 + G 70 -5.4 -4.55295 | GGTAATAATGGCTTT GGAT ATG ATCC TTTATTTATCCCAAA TERM 1258 1230437 - 1230423 - g 75 -7.2 -4.14739 | opp_overlap 1230423 TTATTTATCCCAAAA GGTTTT GAT AAAACC TTAGGTGAATTAAAT Cla_1278 1229925 - 1230542 + | putative purine NTP pyrophosphatase - RdgB/HAM1 family Cla_1279 1233032 - 1230567 - | hypothetical protein TERM 1259 1232999 - 1232978 - G 81 -9.5 -3.64099 | overlap 1232967 1232974 AAAAGATTAAAGTAA TCCCCAAAG TTAG CTTTGGGAA ATTAAGAAAGATTTT Cla_1280 1233601 - 1233032 - | conserved hypothetical protein, putative organic solvent tolerance protein TERM 1260 1233318 - 1233329 + g 78 -4.4 -5.40474 | AGCTTATCTGTGAAG CCTT TTTT AAGG TTTTTTTCAAAAGCT Cla_1281 1234297 - 1233611 - | conserved hypothetical protein, VacJ family TERM 1261 1234532 - 1234518 - g 85 -5.8 -5.4588 | CAAAAGGATAAAAAA TGAAAA AAA TTTTCA CCCTACTTTTTTTAT TERM 1262 1234799 - 1234809 + G 71 -6.8 -3.87149 | AAACCTGTTATTTAT GCTC AAG GAGC TTTGGCTTTACTCAG modA 1234517 - 1235263 + | molybdenum ABC transporter, periplasmic molybdate-binding protein Cla_1283 1235260 - 1235649 + | hypothetical protein TERM 1263 1235683 - 1235668 - g 75 -4.8 -5.03314 | TTGACTTTGAAAAAA TCTTTA AAAA TAAAGA AAAAGAATTTAAACT modC 1235643 - 1236512 + | molybdenum ABC transporter, ATP-binding protein Cla_1285 1238186 - 1236534 - | iron-sulfur cluster-binding domain protein, putative ferridoxin selA 1238276 - 1239607 + | L-seryl-tRNA(SeC) selenium transferase TERM 1264 1240026 - 1240003 - g 72 -4 -5.07971 | overlap 1239996 TAAAAGAATTAAAAA CCTTTAAAAT CAAT ATCTTAAAAG TTTTTCCAACTAGCA TERM 1265 1241065 - 1241051 - g 70 -4.2 -4.88258 | opp_overlap 1241052, overlap 1241052 AAAATTACAAGAAAA GGCTCA TTG TGAGCT TTATGAAATTTTAAA TERM 1266 1241052 - 1241064 + G 76 -7.7 -3.97406 | opp_overlap 1241051 1241052 AAATTACAAGAAAAG GCTCA TTG TGAGC TTTATGAAATTTTAA TERM 1267 1241064 - 1241052 - g 71 -7.7 -3.50515 | opp_overlap 1241052, overlap 1241051 AAATTACAAGAAAAG GCTCA TTG TGAGC TTTATGAAATTTTAA selB 1239600 - 1241405 + | selenocysteine-specific elongation factor Cla_1288 1241459 - 1242172 + | hypothetical protein Cla_1289 1242159 - 1242686 + | conserved hypothetical lipoprotein TERM 1268 1242688 - 1242705 + T 78 -7 -4.70659 | opp_overlap 1242688 TTTATATGCATTAAA GATGGC ATTTAA GCCATC TTTTTAAATATAACC gdhA 1244076 - 1242709 - | glutamate dehydrogenase TERM 1269 1243305 - 1243323 + g 79 -6 -5.02502 | TTATTGTAATTGCTT TTGCGCCA AGT TGGTGTAA TTTTTCTATGGTATA TERM 1270 1243464 - 1243478 + g 70 -4.3 -4.90525 | opp_overlap 1243464 CTGTCCTTGCTAAAC TTCCA CCCCA TGGAA TTTTCTTTCCCGTTA Cla_1291 1244754 - 1244089 - | conserved hypothetical protein (DUF178 domain protein) TERM 1271 1244462 - 1244484 + g 72 -7 -4.06502 | opp_overlap 1244456 1244465, overlap 1244465 TTTGCAAGAGCATTA GAAGTTGCAG AGC TTGCATCTTC TTTGCTTTGAGAATG TERM 1272 1244990 - 1244952 - R 100 -13.7 -5.48213 | opp_overlap 1244952 1244956 1244960 GATTGAAAATAAAAA TTAAGTTTTATTTAAAA AAATA TTTTAAATAAAACTTAA TCTATAAAAACTATT TERM 1273 1244952 - 1244990 + r 100 -13.7 -2.88427 | opp_overlap 1244952, overlap 1244956 1244960 GATTGAAAATAAAAA TTAAGTTTTATTTAAAA AAATA TTTTAAATAAAACTTAA TCTATAAAAACTATT TERM 1274 1244956 - 1244986 + r 82 -10.1 -3.32022 | opp_overlap 1244952, overlap 1244952 1244960 GAAAATAAAAATTAA GTTTTATTTAAAA AAATA TTTTAAATAAAAC TTAATCTATAAAAAC mez 1246236 - 1245001 - | malate oxidoreductase gltX2 1247627 - 1246236 - | glutamyl-tRNA synthetase TERM 1275 1246901 - 1246911 + g 70 -5.4 -4.66953 | CAGTTGCCCCATGAC GCTT AGA AAGC TTTTTGCCATCTTCA TERM 1276 1248499 - 1248488 - g 70 -5.8 -4.31397 | overlap 1248485 ATCTTGATAAAATAA GAGC AAAT GCTC ATATAGAAGAATTAA Cla_1294 1247692 - 1248519 + | hypothetical protein TERM 1277 1248539 - 1248511 - T 100 -12 -3.92996 | opp_overlap 1248511 1248515 GCTCATATAGAAGAA TTAAGATAGGTT AAAAA AACCTATCTTAA TTAATGTCTTGAAAG TERM 1278 1248511 - 1248539 + T 91 -12 -3.37493 | opp_overlap 1248511, overlap 1248515 GCTCATATAGAAGAA TTAAGATAGGTT AAAAA AACCTATCTTAA TTAATGTCTTGAAAG TERM 1279 1248515 - 1248535 + T 75 -8.4 -3.456 | opp_overlap 1248511, overlap 1248511 ATATAGAAGAATTAA GATAGGTT AAAAA AACCTATC TTAATTAATGTCTTG accC 1249871 - 1248540 - | acetyl-CoA carboxylase, biotin carboxylase accB 1250322 - 1249873 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 1280 1250058 - 1250048 - G 74 -6.8 -4.25104 | CCTGCTTTAGCAAAA GGTG CTG CACC TGGGCTTGGAGCTTG dcd 1250454 - 1251014 + | 2'-deoxycytidine 5'-triphosphate deaminase TERM 1281 1252022 - 1252006 - g 73 -8.1 -3.51365 | overlap 1252009 1252013 TTATAGCTCAGATAA TAATCCA TCA TGGATTA GCCAAGAAGAGCTTT pseB 1251065 - 1252072 + | UDP-GlcNAc C6-dehydratase/C4-reductase TERM 1282 1252253 - 1252279 + G 72 -6.8 -4.17048 | opp_overlap 1252273 1252275, overlap 1252254 CATTGCATCTTGCAT ATTTATCTTTAA ATG TTAAAGATAAAA TTGTTTTAACAACCC TERM 1283 1252254 - 1252278 + G 81 -10.3 -3.09908 | opp_overlap 1252273 1252275, overlap 1252253 ATTGCATCTTGCATA TTTATCTTTAA ATG TTAAAGATAAA ATTGTTTTAACAACC Cla_1299 1252069 - 1253199 + | aminotransferase, DegT/DnrJ/EryC1/StrS family TERM 1284 1253935 - 1253903 - g 72 -4.9 -4.92363 | overlap 1253891 AAATATTTACAAAAA TATACAAAAGCAGGC TTT GCACTCTCTTGTATA GGTGATGATAATGCT Cla_1300 1253192 - 1254460 + | hypothetical protein Cla_1301 1254457 - 1255239 + | hypothetical protein acpP2 1255241 - 1255465 + | acyl carrier protein, putative Cla_1303 1255459 - 1256361 + | conserved hypothetical protein, methyltransferase type 12 domain TERM 1285 1256346 - 1256377 + F 82 -9.7 -3.53444 | AGTAATGGCTGTAGT TTTGGTGAAAGAA TGAACC TTTTTTCACCAAA TTTAAAAAGAAATGA Cla_1304 1256358 - 1257881 + | conserved hypothetical protein, putative HAD superfamily hydrolase fabH1 1257865 - 1258932 + | 3-oxoacyl-(acyl carrier protein) synthase III acpP3 1258925 - 1259143 + | acyl carrier protein, putative TERM 1286 1259122 - 1259160 + T 90 -6.9 -5.16132 | gap 1, overlap 1259123 AAAAGTAAGTGATCT TTTAGCACTAGCAAAGGT TTAA GCC-TTGCTAATGCTAAG TTTTATTTTACTATC TERM 1287 1259123 - 1259159 + T 76 -8.2 -3.68052 | gap 1, overlap 1259122 AAAGTAAGTGATCTT TTAGCACTAGCAAAGGT TTAA GCC-TTGCTAATGCTAA GTTTTATTTTACTAT Cla_1307 1260372 - 1259140 - | hypothetical protein TERM 1288 1259643 - 1259620 - G 71 -3.2 -5.20216 | opp_overlap 1259622, overlap 1259612 1259622 TATATTATGAAAAAA TTCAAAAGTT GCGC AACTTTCGTA TTTTGTATAATCAAC TERM 1289 1259966 - 1259978 + g 80 -2 -5.80364 | AACTCCCACTCATTT TTCA TAGTT TGAA TTTTTTTATTAAGAT Cla_1308 1261601 - 1260381 - | hypothetical protein TERM 1290 1260701 - 1260711 + g 81 -2.6 -5.74684 | TAGAATGATAACTTG TATA TAT TATA TTTTTATTTTTATTA Cla_1309 1261671 - 1262003 + | hypothetical protein Cla_1310 1261960 - 1262454 + | hypothetical protein TERM 1291 1263583 - 1263567 - g 100 -8.1 -5.73978 | ACGATAAAGAAAAAA CACAAAA AGC TTTTGTG CAAAATCCCTTGCAT Cla_1311 1262456 - 1263952 + | conserved hypothetical protein, putative amino acid adenylation domain protein TERM 1292 1264048 - 1264026 - g 70 -6.4 -4.15788 | opp_overlap 1264014, overlap 1264029 AATTTTTTTAACAAA GAAGTATTTA AAA TAGATACTTC AAACATCAATAGTTT TERM 1293 1264203 - 1264216 + G 72 -8.1 -3.35046 | opp_overlap 1264202 1264203, overlap 1264202 CATAAAGGTAACAAT GCCCA TATT TGGGC TATTTGGGAAAATGA Cla_1312 1263939 - 1264655 + | conserved hypothetical protein, formyltransferase domain protein acpP4 1264670 - 1264894 + | acyl carrier protein, putative Cla_1314 1264891 - 1265856 + | 3-oxoacyl-(acyl carrier protein) synthase III FabH2, putative TERM 1294 1265966 - 1265941 - f 72 -6.3 -4.20136 | opp_overlap 1265939 1265941 1265958 1265963, overlap 1265963 ATCTTTAAAAGTAAA TATCTTATCTT TGCA AGGATAAGATA TGTTATCTTCTCTCA TERM 1295 1265941 - 1265966 + F 77 -8.5 -3.47975 | opp_overlap 1265941 1265963, overlap 1265939 1265958 1265963 ATCTTTAAAAGTAAA TATCTTATCTT TGCA AGGATAAGATA TGTTATCTTCTCTCA TERM 1296 1265985 - 1265995 + F 71 -2.6 -5.54079 | TATCTTCTCTCATAT TAAA TGT TTTA TTTTTTAATTTTTCA TERM 1297 1267333 - 1267321 - g 75 -4.9 -5.05782 | opp_overlap 1267321 ATTTATTGGAAAAAA TTTAG ACG CTAAA TATATAACTCCAGAT acpP5 1267166 - 1267396 + | acyl carrier protein, putative TERM 1298 1267407 - 1267378 - T 100 -10.9 -5.4505 | opp_overlap 1267377, overlap 1267380 TTCTGCAATAAAAAA TATGCTTGAGACT ATAT AATCTCAAGCACA AATTTATCACCTTTG TERM 1299 1267405 - 1267380 - T 95 -11.3 -4.36592 | opp_overlap 1267377, overlap 1267378 CTGCAATAAAAAATA TGCTTGAGACT ATAT AATCTCAAGCA CAAATTTATCACCTT Cla_1318 1269353 - 1268607 - | hypothetical protein Cla_1319 1270600 - 1269356 - | hypothetical protein TERM 1300 1269853 - 1269843 - G 86 -5.4 -5.56568 | overlap 1269850 ATATTATTAAAAAAA GCAA AAG TTGC AAAGCAAAAATATTT TERM 1301 1270188 - 1270200 + g 80 -2 -5.80364 | AATTCCCAATCATCT TTCA TAGTT TGAA TTTTTTTATTAAGAT pseF 1270664 - 1271359 + | CMP-N-acetylneuraminic acid synthetase pseG 1271356 - 1272180 + | nucleotidase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc TERM 1302 1272551 - 1272530 - g 83 -8.9 -4.14724 | opp_overlap 1272545 AAAGAAAATATTAAA GCTTTAAAT TTGT ATTTAAAGC ACGGATTTAATATCA pseH 1272173 - 1272664 + | N-acetyltransferase specific for PseC product, UDP-4-amino-4,6-dideoxy-beta-L-AltNAc Cla_1323 1272661 - 1273347 + | conserved hypothetical protein, putative formyltransferase Cla_1324 1273337 - 1274008 + | LmbE-like protein TERM 1303 1274119 - 1274109 - g 85 -2.6 -5.83211 | TATGAAAACAAAAAA TATA AAT TATA AAGAGCATTTGATAT TERM 1304 1274389 - 1274368 - g 83 -8.9 -4.14724 | opp_overlap 1274367 1274363 1274383 AAAGAAAATATTAAA GCTTTAAAT TTGT ATTTAAAGC ATGGATTTAATATCA TERM 1305 1274442 - 1274458 + G 70 -5.1 -4.62085 | opp_overlap 1274445, overlap 1274439 1274445 TTTTGTAAATTTAAA CAATCCT AAC AGGAATG TTGTTTTTTAAAAGT Cla_1325 1274005 - 1274469 + | conserved hypothetical protein, possible N-acetyltransferase PseH hisF2 1275168 - 1274437 - | imidazoleglycerol phosphate synthase, cyclase subunit hisH2 1275780 - 1275178 - | imidazoleglycerol phosphate synthase, glutamine amidotransferase subunit TERM 1306 1275719 - 1275729 + g 70 -5.4 -4.67755 | ACTTTTTGATTTATA GCTT CAA AAGC TTTTTGAATAGATCT pseA 1276913 - 1275777 - | pseudaminic acid biosynthesis protein PseA Cla_1329 1277025 - 1277804 + | conserved hypothetical integral membrane protein (DUF81 domain protein) flhB 1278872 - 1277796 - | flagellar biosynthesis protein FlhB TERM 1307 1278907 - 1278926 + r 89 -9.4 -4.42238 | opp_overlap 1278907 CAATTATAGCTAAAA CATCTGTA AAAT TACAGATG TTTTAATTCAAATCC TERM 1308 1278926 - 1278907 - R 89 -9.4 -4.26019 | opp_overlap 1278907 CAATTATAGCTAAAA CATCTGTA AAAT TACAGATG TTTTAATTCAAATCC Cla_1331 1280977 - 1278941 - | MCP-domain signal transduction protein TERM 1309 1279802 - 1279826 + g 81 -6.5 -5.1166 | overlap 1279819 AACTGATTGTTCTAC TGCTTTAGCAT CTT GTTCTAAAGCA TTTTTAGTTTTAGTG TERM 1310 1281146 - 1281120 - R 100 -11 -5.01732 | opp_overlap 1281116 1281125 1281143 AAGTTTTCGAAAAAA TAGCAGTGAAGT AAG ATTTCACTGCTA TAAAATTATAGCTTA ahpC 1281748 - 1281152 - | alkyl hydroperoxide reductase C22 protein, AhpC/TsaA family fdxA 1281934 - 1282218 + | ferredoxin TERM 1311 1282351 - 1282337 - f 77 -5.8 -4.84918 | TTTATAAATATAAAA CTTAAT TCA ATTAAG GGGACGATTTTGGAA TERM 1312 1282757 - 1282734 - g 72 -4.8 -4.89729 | gap 1, opp_overlap 1282752 TAGAAAATGCAAAAA TTGAAATAGAA TTT TTCT-TTTCAA AAACTGAAATTTTAT ndk 1282361 - 1282774 + | nucleoside diphosphate kinase Cla_1335 1282774 - 1283127 + | hypothetical protein rpmF 1283142 - 1283288 + | 50S ribosomal protein L32 TERM 1313 1283361 - 1283383 + G 81 -9.2 -3.60948 | opp_overlap 1283366 TTATAGAAGGTGTGA TTCAAGCTCT AAA AGAGCGTGAA TTTAAAGCTATATTG plsX 1283294 - 1284283 + | fatty acid\phospholipid synthesis protein fabH3 1284270 - 1285253 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1314 1285244 - 1285272 + T 77 -8.4 -3.62859 | opp_overlap 1285244, overlap 1285247 TTTTGGTGGAGAAAA TAACAAATAGGT TTTTT ACTTATTTGTTA TTTAAAAGTTCTAAT TERM 1315 1285272 - 1285244 - T 72 -6.2 -4.36914 | opp_overlap 1285244 1285247 TTTTGGTGGAGAAAA TAACAAATAGGT TTTTT ACTTATTTGTTA TTTAAAAGTTCTAAT motB 1286004 - 1285270 - | flagellar motor component MotB TERM 1316 1285720 - 1285734 + g 86 -7.2 -5.30575 | TTCTATATTTTCTTG TTGAGT GAT ACTCAA TTTTTTAAGTTTTTC TERM 1317 1285910 - 1285896 - G 76 -7.8 -3.88291 | GATTACTTTCAGAAA TCGCCC AAA GAGCGA TAAAAAGAGCCAAAA TERM 1318 1285953 - 1285917 - G 70 -4.3 -4.92363 | opp_overlap 1285948, overlap 1285926 AAAGAGCGATAAAAA GAGCCAAAAGCAAACTT AAA AAGTCTGCATAAGGCAC GGCCCATTTTTCACC TERM 1319 1285944 - 1285926 - G 85 -8.2 -4.37991 | overlap 1285917 TAAAAAGAGCCAAAA GCAAACTT AAA AAGTCTGC ATAAGGCACGGCCCA motA 1286787 - 1286014 - | flagellar motor component MotA polA 1289439 - 1286800 - | DNA polymerase I TERM 1320 1288492 - 1288502 + g 75 -4 -5.26918 | AAAAGCAACAATGCT TTGA TCA TCAA TTTTTTCTAAAATGT TERM 1321 1289640 - 1289625 - g 71 -3.2 -5.32944 | opp_overlap 1289626, overlap 1289626 TCCACAAGGAAAAAA GGCCTT TAAA AAGGCT GTGTTTTCATGTTGG TERM 1322 1290736 - 1290711 - g 72 -4.1 -5.14563 | gap 1, opp_overlap 1290733, overlap 1290713 TTTTGGAGCAAAAAA TCGCTA-TACCA AAA TGGCACTAGCAA AAGAATTTGGCTCTA Cla_1342 1289572 - 1290924 + | major facilitator superfamily transporter Cla_1343 1290921 - 1291928 + | inosine-uridine preferring nucleoside hydrolase family protein Cla_1344 1292327 - 1291884 - | hypothetical protein trpB 1292602 - 1293777 + | tryptophan synthase, beta chain TERM 1323 1295192 - 1295174 - g 85 -2.5 -5.90981 | gap 1, overlap 1295178 TTATACGAAAAAAAA TGAGTGGT TTGA ACCA-TCA AGAAAGTATATTTTA Cla_1346 1294047 - 1295633 + | disulfide bond formation protein, DsbB family TERM 1324 1295637 - 1295656 + T 100 -12.2 -4.18668 | opp_overlap 1295635 AATCCTTTATAATTT TTCCTGCC TTTT GGCAGGAA TTTAATATTTTTTAA uvrA 1298493 - 1295668 - | excinuclease ABC, subunit A TERM 1325 1296083 - 1296098 + g 83 -7.6 -4.56597 | opp_overlap 1296083 ACTTTTACTAAAGTA TCAAGC TTTT GCTTGA TTTTTGGCACCAAAG TERM 1326 1297285 - 1297301 + g 70 -3.7 -5.11613 | overlap 1297286 TCTTAAACGATGACC ATTGCAA TCT TTGCAAG TTTTTTCACTCATAT cstA 1298702 - 1300807 + | carbon starvation protein A TERM 1327 1300966 - 1300942 - g 71 -5.9 -4.42088 | overlap 1300953 1300954 AAAAGTAGAAAAGAA TTTTTTAAAGA TTT TCTTGAAAAAA AATACAATAGTGGCT Cla_1349 1300804 - 1300995 + | conserved hypothetical protein (DUF466 domain protein) TERM 1328 1301061 - 1301033 - T 100 -16.3 -5.39721 | opp_overlap 1301030 1301029, overlap 1301026 1301052 TTACTATACAAAAAA TGATTTTTGGTGA AAA TCACCAAAAATCA AGCATGTTTTTTAGC serC 1302135 - 1301059 - | phosphohydroxythreonine transaminase/phosphoserine transaminase TERM 1329 1301479 - 1301491 + g 90 -6.3 -5.65496 | AATGCTGTATTTTAA CATAC TAG GTATG TTTTTATTTTTGCTA xseA 1303311 - 1302148 - | exodeoxyribonuclease VII, large subunit TERM 1330 1303300 - 1303310 + g 88 -4 -5.80364 | TTTTAAATTAAGTTC TGAA ACT TTCA TTTTTTTCTTGCAAT ubiE 1304009 - 1303308 - | ubiquinone/menaquinone biosynthesis methlytransferase Cla_1353 1304765 - 1304013 - | hypothetical protein TERM 1331 1304078 - 1304088 + g 72 -4 -5.16472 | TTTTTTCTTTTATCA TCAA ATT TTGA TTTTTTAGCATTTTT TERM 1332 1304756 - 1304779 + g 74 -5.3 -4.85782 | opp_overlap 1304759, overlap 1304759 TCACAGCAGTATACT CAAGACGCA AGAAAA TGCGTCTTA TTTATTTTTACAAAA TERM 1333 1304759 - 1304776 + g 78 -7 -4.52502 | opp_overlap 1304759, overlap 1304756 CAGCAGTATACTCAA GACGCA AGAAAA TGCGTC TTATTTATTTTTACA perR 1305193 - 1304777 - | peroxide stress regulator TERM 1334 1304856 - 1304870 + g 71 -7.2 -3.72374 | overlap 1304854 TTACCAATCTTTTTC TCAAGA TCT TCTTGA TATTTGTTAATCCCA dxs 1307106 - 1305277 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1335 1305730 - 1305710 - G 74 -3.3 -5.4833 | TCATCTAATAAAAAA TTTCCCCTA GGA TAGCGAAAA GCAAAAACTCCTTGA fliH 1307921 - 1307103 - | flagellar biosynthesis protein FliH fliG 1308954 - 1307926 - | flagellar motor switch protein FliG TERM 1336 1308624 - 1308644 + g 73 -5.5 -4.6635 | GATTATTTTCCATAC TTTTGGTAA GTT TTTCCAAAA TTTTATTGGCAATTT fliF 1310639 - 1308954 - | flagellar MS-ring protein FliF hisC 1311745 - 1310654 - | histidinol-phosphate aminotransferase TERM 1337 1311596 - 1311608 + g 72 -4.8 -4.93365 | TGCATTATTTATGAT GGCT TCTTT AGCC TTTTTACTTGTGCCA pheA 1312808 - 1311735 - | chorismate mutase/prephenate dehydratase TERM 1338 1312765 - 1312777 + g 78 -6.3 -4.69656 | GCCAAAATTTTATCA TCGAT AGT ATCGA TTTTGTTGCGTAATT Cla_1361 1313566 - 1312805 - | conserved hypothetical protein, HAD-superfamily hydrolase, subfamily IIA lysA 1314773 - 1313568 - | diaminopimelate decarboxylase Cla_1363 1315848 - 1314787 - | hypothetical protein pth 1316389 - 1315850 - | peptidyl-tRNA hydrolase TERM 1339 1316260 - 1316232 - G 89 -3.9 -6.06723 | opp_overlap 1316235 1316236 1316238, overlap 1316233 1316236 GGTTTTAAAAAAAAA GCAAGAGAACTTT TAA AAAGTTCTCCTTT AAATTTAGTATTTGA TERM 1340 1316259 - 1316233 - G 77 -7.4 -4.22949 | opp_overlap 1316235 1316236 1316238, overlap 1316232 1316236 GTTTTAAAAAAAAAG CAAGAGAACTTT TAA AAAGTTCTCCTT TAAATTTAGTATTTG TERM 1341 1316235 - 1316257 + g 76 -7.8 -3.88823 | opp_overlap 1316233 1316232 1316236, overlap 1316236 1316238 TTTAAAAAAAAAGCA AGAGAACTTT TAA AAAGTTCTCC TTTAAATTTAGTATT TERM 1342 1316236 - 1316256 + g 87 -11.3 -2.92209 | opp_overlap 1316233 1316232 1316236, overlap 1316235 1316238 TTAAAAAAAAAGCAA GAGAACTTT TAA AAAGTTCTC CTTTAAATTTAGTAT TERM 1343 1316256 - 1316236 - G 100 -11.3 -4.20371 | opp_overlap 1316236 1316235 1316238, overlap 1316233 1316232 TTAAAAAAAAAGCAA GAGAACTTT TAA AAAGTTCTC CTTTAAATTTAGTAT rplY 1316927 - 1316391 - | 50S ribosomal protein L25 tal 1317945 - 1316974 - | transaldolase serB 1318568 - 1317942 - | 3-phosphoserine phosphatase cheW 1319086 - 1318568 - | chemotaxis protein CheW TERM 1344 1318753 - 1318737 - G 82 -8 -4.4767 | opp_overlap 1318736 CTATCTATCACAAAA CCTGCA TTACC TGCAGG AGTTTGATTTCCATT cheA 1321403 - 1319091 - | chemotaxis protein CheA TERM 1345 1319816 - 1319798 - G 71 -4.6 -4.82128 | TTACTAAAGATAAAA CTTCATCT CTT AAACGAAG CACATTTTTACCTTC cheV 1322359 - 1321406 - | chemotaxis protein CheV Cla_1371 1323087 - 1322359 - | hypothetical protein TERM 1346 1323046 - 1323061 + g 82 -6.2 -5.20781 | ATTTTCATGGGCATC TGCTAT AAAA ATAGCA TTTTCTTTTATAATA greA 1323576 - 1323091 - | transcription elongation factor GreA lpxB 1324680 - 1323586 - | lipid-A-disaccharide synthase TERM 1347 1324111 - 1324128 + g 78 -4.2 -5.42862 | opp_overlap 1324110, overlap 1324111 ACCTGGTAAGAAAGC GATGAT TTTTTC ATCATC TTTTTTTGAAAATAT TERM 1348 1324735 - 1324757 + r 81 -9.2 -3.74693 | opp_overlap 1324721 1324731 1324740, overlap 1324736 1324740 ATTTTAACTTAGAGT TTAAACCCGT AAA GCGGGTTTAG TTTAATAAAGTGGAG TERM 1349 1324736 - 1324756 + r 82 -10.5 -2.84602 | opp_overlap 1324721 1324731 1324740, overlap 1324735 1324740 TTTTAACTTAGAGTT TAAACCCGT AAA GCGGGTTTA GTTTAATAAAGTGGA TERM 1350 1324740 - 1324752 + r 73 -6.9 -4.10552 | opp_overlap 1324731 1324740, overlap 1324736 1324735 AACTTAGAGTTTAAA CCCGT AAA GCGGG TTTAGTTTAATAAAG cdtC 1325331 - 1324759 - | cytolethal distending toxin, subunit CdtC cdtB 1326120 - 1325341 - | cytolethal distending toxin, subunit CdtB cdtA 1326957 - 1326145 - | cytolethal distending toxin, subunit CdtA TERM 1351 1327861 - 1327849 - g 74 -7.7 -3.74872 | ATCTATGCTACCAAA TGGAG AAG CTCCA GAATATACAGAAAAT pepT 1327103 - 1328335 + | peptidase T, M20 family TERM 1352 1328330 - 1328351 + T 82 -10.3 -3.40403 | opp_overlap 1328330 CTAGCTGCTAAAGAA GTTTAAGCT TTTA AGCTTAAAC TTATAATAACACAAA TERM 1353 1328351 - 1328330 - T 88 -10.3 -3.91716 | opp_overlap 1328330 CTAGCTGCTAAAGAA GTTTAAGCT TTTA AGCTTAAAC TTATAATAACACAAA Cla_1378 1329644 - 1328352 - | putative C4-dicarboxylate transporter pepE 1330358 - 1329654 - | peptidase E, S51 family TERM 1354 1330390 - 1330363 - R 91 -11.6 -3.58905 | opp_overlap 1330363 1330367 AGTTTTGACATAGAA TACCTTTTATAA AAAT TTATAAAAGGTA TTATACAAAAATTGT TERM 1355 1330363 - 1330390 + r 90 -11.6 -3.30338 | opp_overlap 1330363, overlap 1330367 AGTTTTGACATAGAA TACCTTTTATAA AAAT TTATAAAAGGTA TTATACAAAAATTGT TERM 1356 1330410 - 1330433 + r 74 -7 -4.31433 | opp_overlap 1330415, overlap 1330406 ACAAAAATTGTTTTT TAATATAAAA ATTA TTTTATATTA TTTATTGTAGCCATA peb3 1331180 - 1330431 - | major antigenic peptide PEB3 surE 1331280 - 1332053 + | stationary-phase survival protein SurE Cla_1382 1332046 - 1332699 + | HesA/MoeB/ThiF family protein Cla_1383 1332747 - 1333493 + | conserved hypothetical protein, possible beta-lactamase TERM 1357 1333852 - 1333863 + G 86 -3 -5.85011 | TCGACAAACCACTAG GTAT TTTT ATAC TTTTTTTACTTTTTC Cla_1384 1333506 - 1334327 + | conserved hypothetical protein, putative metal-dependent membrane protease bioC 1335025 - 1334324 - | biotin synthesis protein BioC TERM 1358 1334659 - 1334641 - G 74 -3.2 -5.4588 | CAAAAGTAGAAAAAA GAAAATAA GCA TTTTTTTC TAAAATAAAAGAAAT TERM 1359 1334680 - 1334670 - G 72 -4 -5.07652 | TTTTCTAAAATAAAA GAAA TAT TTTC TATCAATAAATCTAA Cla_1386 1335636 - 1335022 - | conserved hypothetical protein (DUF452 domain protein) bioF 1336757 - 1335633 - | 8-amino-7-oxononanoate synthase TERM 1360 1335845 - 1335858 + g 70 -5.3 -4.56597 | CTAAAATCTCTCCTT TGCTT GCTA AAGCA TTTTTAAACCAAGCG Cla_1388 1337311 - 1336757 - | conserved hypothetical protein, tetratricopeptide repeat domain protein family TERM 1361 1338461 - 1338444 - g 71 -4.9 -4.83677 | overlap 1338433 AAAATAAAATCAAAA GTGCTTT TATA AAAACAC AATGGGAGAGTTTAA bioA 1337441 - 1338709 + | adenosylmethionine--8-amino-7-oxononanoate aminotransferase bioD 1339255 - 1338683 - | dethiobiotin synthetase Cla_1391 1339577 - 1339263 - | putative multidrug resistance protein, SMR family Cla_1392 1339924 - 1339577 - | putative multidrug resistance protein, SMR family TERM 1362 1341116 - 1341100 - g 76 -9.5 -3.0641 | overlap 1341090 AAAAATCGGCGAAGA GCCAAAA GTA TTTTGGC CACTTGAAAAATAAT ansB 1340096 - 1341130 + | L-asparaginase Cla_1394 1341553 - 1341131 - | hypothetical protein carB 1344813 - 1341550 - | carbamoylphosphate synthase, large subunit TERM 1363 1342731 - 1342741 + g 84 -6.8 -5.33921 | CCTCTTCTACACTTA TGGC TGT GCCA TTTTTTGGTTGATTT TERM 1364 1344387 - 1344404 + g 88 -5.6 -5.5943 | ACGCATACATAGATT TTGGCA AGTCCA TGCCAA TTTTTTTCATGCTTT Cla_1396 1345635 - 1344895 - | rod shape-determining protein MreC TERM 1365 1345588 - 1345551 - G 100 -11.7 -4.36595 | opp_overlap 1345546, overlap 1345553 TATTTAAATCTAAAA CATTTCGTTTTATTATA TCTC CATAATAAAACGAAATA AATACTAAAAAAGAT TERM 1366 1345586 - 1345553 - G 95 -12.1 -3.78026 | opp_overlap 1345546, overlap 1345551 TTTAAATCTAAAACA TTTCGTTTTATTATA TCTC CATAATAAAACGAAA TAAATACTAAAAAAG mreB 1346662 - 1345625 - | rod shape-determining protein MreB clpX 1347894 - 1346659 - | ATP-dependent ClpXP protease, ATP-binding subunit ClpX lpxA 1348678 - 1347887 - | UDP-N-acetylglucosamine acyltransferase TERM 1367 1348262 - 1348274 + g 70 -6.3 -4.04413 | opp_overlap 1348270, overlap 1348270 AAGTTCTACATGTCC TGCTA AAG TAGCA TTATTTGCTAATATT fabZ 1349118 - 1348678 - | 3-hydroxymyristoyl-(acyl carrier protein) dehydratase Cla_1401 1350260 - 1349187 - | conserved hypothetical protein (DUF208 domain protein) TERM 1368 1349635 - 1349647 + g 76 -2.7 -5.60689 | AAATTTTTAACTCTT TCATA AAA TGTGA TTTTTTCTTCTATGC TERM 1369 1349805 - 1349817 + g 71 -3.3 -5.26316 | opp_overlap 1349794 CAAAGCAAATTGTCT TTGCG TGC CGCCA TTTTTTCTAAAATCA bcp 1350715 - 1350254 - | bacterioferritin comigratory protein (AhpC/Tsa family) TERM 1370 1350635 - 1350619 - G 70 -5.3 -4.5478 | opp_overlap 1350617 1350619 AAAAATATAAAATAA TTTTTTT TCC AAAAAAA TCTTTTAATGAAATT Cla_1403 1350918 - 1350712 - | 4-oxalocrotonate tautomerase family protein ilvE 1351016 - 1351930 + | branched-chain amino-acid aminotransferase Cla_1405 1351943 - 1353013 + | conserved hypothetical transmembrane protein (SPFH domain / Band 7 family) Cla_1406 1353031 - 1353567 + | hypothetical protein Cla_1407 1353567 - 1354097 + | hypothetical protein TERM 1371 1354119 - 1354098 - T 84 -8.9 -4.08307 | overlap 1354091 TTAAAATGCAAATAA GGATTATTT AATA AAATAATCC CCATCAAAACTAATC purF 1355441 - 1354101 - | amidophosphoribosyltransferase dapB 1356170 - 1355442 - | dihydrodipicolinate reductase TERM 1372 1356074 - 1356058 - G 73 -8.1 -3.38191 | AAAAAATCTTCATAA TTTGATC CTT GATCAAA AAACGCACTAGCCTT Cla_1410 1356540 - 1356241 - | hypothetical protein trxB 1357546 - 1356605 - | thioredoxin reductase TERM 1373 1357655 - 1357641 - R 100 -10 -4.82518 | AAAATATGAAGAAAA GCCACT AAA AGTGGC TTGAGATTATAAAAG trx 1357976 - 1357662 - | thioredoxin TERM 1374 1357929 - 1357944 + g 74 -6.2 -4.42788 | TAAAGCTACACCTTC TTTTGC TTGT GCAAAA TTTTCTGCAGTTAAA Cla_1413 1358366 - 1358028 - | conserved hypothetical protein (UPF0102 domain protein) TERM 1375 1358286 - 1358262 - G 71 -7.3 -3.76759 | opp_overlap 1358261 1358262 ATCAATTTCACCAAA TTTAGAATGAA AAT TTCTTTCTAAA ATTTCAAAATCTTTA hom 1359620 - 1358367 - | homoserine dehydrogenase TERM 1376 1358861 - 1358873 + g 72 -6.3 -4.27753 | opp_overlap 1358860 TTAACATGACAGGAT GAACT CTT AGTTC TATTTTTTCATCTTT aspC 1360824 - 1359622 - | aminotransferase (AspC family) Cla_1416 1361643 - 1360837 - | hypothetical protein Cla_1417 1362515 - 1361637 - | hypothetical protein Cla_1418 1363188 - 1362508 - | conserved hypothetical protein, probable rRNA methyltransferase, TrmH family Cla_1419 1364026 - 1363208 - | tetrapyrrole methylase family protein TERM 1377 1363297 - 1363270 - G 74 -7.1 -3.91716 | TGATTTTTGAAAGAA GCTTTGCCTTT GTTTTT AAAGGCAAATC AAGTTCATGAATATC rpmE 1364226 - 1364026 - | 50S ribosomal protein L31 Cla_1421 1364966 - 1364304 - | conserved hypothetical protein (DUF558 domain protein) TERM 1378 1364658 - 1364626 - G 89 -9.4 -4.30448 | opp_overlap 1364624 AAATCTAATTTAAAA TTCTTTTGTGAATA ATCCA TATACACAAAAGAA AGCTTTGCTACTCCA Cla_1422 1365376 - 1364966 - | hypothetical protein Cla_1423 1365576 - 1365376 - | hypothetical protein Cla_1424 1366160 - 1365576 - | conserved hypothetical protein, putative 6-pyruvoyl tetrahydropterin synthase Cla_1425 1366906 - 1366157 - | radical SAM domain protein TERM 1379 1366413 - 1366423 + g 74 -5.4 -4.90869 | opp_overlap 1366413 GCATAATGTTTAAAA GCTT TCA AAGC TTTTTCATTAATCCT moaA 1367874 - 1366906 - | molybdenum cofactor biosynthesis protein A TERM 1380 1367765 - 1367780 + g 83 -7.6 -4.62336 | AGATTTTCCTTGGCA CTCCAT TCAA ATGGAG TTTTTGGCATACAAT Cla_1427 1368405 - 1367884 - | hypothetical protein Cla_1428 1368901 - 1368398 - | hypothetical protein TERM 1381 1368904 - 1368891 - G 72 -2.5 -5.43866 | GAACTTTTAAAAAAA TTTAT CTCC ATAAA AGATCAACCCAAATA ubiA 1369767 - 1368892 - | 4-hydroxybenzoate octaprenyltranferase TERM 1382 1369155 - 1369175 + g 83 -3.2 -5.70829 | CAAGCCCAAATTTAG CAGGTATG GAGTG CAAGCCTG TTTTTTTATCATATT TERM 1383 1369493 - 1369476 - G 72 -2.8 -5.4593 | TTAAAATAATAAAAA GTAAAA TACTAG TTTTAC CTATACGCCCATCGA TERM 1384 1370096 - 1370083 - g 86 -5.3 -5.55695 | GAAGAATACAAAAAA GCAAA AACC TTTGC TCAAAAAAACAATCA TERM 1385 1370234 - 1370216 - g 74 -7.6 -3.86776 | opp_overlap 1370208 TAAGTAATGATGAAA TTTATCAT TTA ATGATAAA AATTGATCCGCAAGC TERM 1386 1370276 - 1370265 - g 89 -4.4 -5.9667 | opp_overlap 1370265 AAAAATAGAAAAAAA CGAT ACTT ATCG TTTGAAAAAATGGCT miaA 1369837 - 1370712 + | tRNA delta(2)-isopentenylpyrophosphate transferase pflA 1373066 - 1370703 - | paralysed flagella protein PflA TERM 1387 1371187 - 1371197 + g 70 -4 -4.93968 | opp_overlap 1371187 AAAAATTTAATATAA TTTG CTT CAAA TTTTTCATTATCACT TERM 1388 1371961 - 1371926 - G 77 -7.8 -4.15328 | AACTTAAATCATAAA CCCTATTATTAGCAAA AGTT TTAGCTAATAATAAAG AATTTTCCAAATCGC TERM 1389 1372713 - 1372702 - G 70 -4.4 -4.95487 | opp_overlap 1372708 AAAATAAATACAAAA TGCT TAGA AGCA TCGCTACTTTGACTT TERM 1390 1373071 - 1373057 - G 76 -2.8 -5.51078 | opp_overlap 1373057, overlap 1373059 AAAATAAAAATAAAA CCCTTA TCA TAAGCG TGATTATAGCAATAT nuoN 1374488 - 1373091 - | NADH-quinone oxidoreductase, N subunit TERM 1391 1374032 - 1374058 + g 74 -8.8 -3.32022 | opp_overlap 1374032 TTATACTAGAGCTAA TAGCATTATGAG TTC CTCTTAGTGCTA TTAATGTATAAAGAG TERM 1392 1374337 - 1374327 - G 84 -6.8 -5.25906 | ATAAATCAATAAAAA GCAC AAA GTGC TAAATAAGGCTATAA nuoM 1375957 - 1374488 - | NADH-quinone oxidoreductase, M subunit TERM 1393 1375357 - 1375326 - G 100 -11 -4.62772 | opp_overlap 1375329 TGGAAAGGAAACAAA GGACTTTTAATCGC AAAA GCGATAAAAAATCC TATAAAGATTAAATT nuoL 1377761 - 1375959 - | NADH-quinone oxidoreductase, L subunit TERM 1394 1376441 - 1376459 + g 79 -8.2 -3.92746 | CTATTTTACTAGCTT CATGAGGA TGT TCTTCATG TCTTTTTGGAGTAAA TERM 1395 1377248 - 1377258 + g 72 -8.2 -3.22476 | opp_overlap 1377247 1377248 AAAGCAAAGCTAAAT CCGC AAT GCGG TTCATGATAAATGCT nuoK 1378063 - 1377749 - | NADH-quinone oxidoreductase, K subunit nuoJ 1378566 - 1378060 - | NADH-quinone oxidoreductase, J subunit nuoI 1379191 - 1378559 - | NADH-quinone oxidoreductase, I subunit nuoH 1380198 - 1379200 - | NADH-quinone oxidoreductase, H subunit nuoG 1382648 - 1380195 - | NADH-quinone oxidoreductase, G subunit Cla_1440 1383358 - 1382645 - | putative NADH-quinone oxidoreductase, F subunit Cla_1441 1383582 - 1383355 - | putative NADH-quinone oxidoreductase, E subunit nuoD 1384805 - 1383579 - | NADH-quinone oxidoreductase, D subunit nuoC 1385601 - 1384807 - | NADH-quinone oxidoreductase, C subunit nuoB 1386095 - 1385598 - | NADH-quinone oxidoreductase, B subunit nuoA 1386493 - 1386074 - | NADH-quinone oxidoreductase, A subunit TERM 1396 1386593 - 1386575 - R 77 -4.7 -5.23943 | opp_overlap 1386562 TATCAAAAAAATAAA TTTTTGA GTATT TCAAAAA GAAACAATTTTTATC dppF 1387282 - 1386614 - | peptide ABC transporter, ATP-binding protein dppD 1388039 - 1387266 - | peptide ABC transporter, ATP-binding protein dppC 1388812 - 1388036 - | peptide ABC transporter, permease protein dppB 1389755 - 1388805 - | peptide ABC transporter, permease protein TERM 1397 1389519 - 1389564 + g 75 -9.3 -2.90496 | opp_overlap 1389516 1389519 1389528, overlap 1389517 1389528 ACCGCTTATTAATGA GTAGGAAAATTCGCCTTTTAA GGCA TTAAAAAGCCAATTTTCATAC TGCTTTAACAAAGGC TERM 1398 1389564 - 1389519 - G 85 -11.5 -2.78018 | opp_overlap 1389519 1389517 1389528, overlap 1389516 1389528 ACCGCTTATTAATGA GTAGGAAAATTCGCCTTTTAA GGCA TTAAAAAGCCAATTTTCATAC TGCTTTAACAAAGGC TERM 1399 1389734 - 1389720 - G 91 -4.9 -5.89827 | opp_overlap 1389720 AATCATCAAAAAAAA CGCCC ATAAA AGGCG TTTAAAAATGAGTTT dppA 1391290 - 1389755 - | peptide ABC transporter, periplasmic substrate-binding protein TERM 1400 1389900 - 1389884 - G 72 -2.9 -5.38958 | overlap 1389885 AGCTATAAACAAAAA CGCAGGA TCA TCTTGCA ATGCATCGATAAATT Cla_1451 1393276 - 1391333 - | BCCT (betaine/carnitine/choline) family transporter TERM 1401 1392133 - 1392123 - G 81 -2.6 -5.74684 | TAAGAAAAAGAAAAA TTTT GTA AAAA ATAAAAAAGCAAACT Cla_1452 1394125 - 1393475 - | conserved hypothetical protein (DUF162 domain protein) Cla_1453 1395533 - 1394118 - | putative iron-sulfur cluster binding protein TERM 1402 1395019 - 1395029 + g 72 -4 -5.06816 | opp_overlap 1395019 GGCTCACTTTCTAAA TTAG AGC CTAA TTTTTCTTGAAAAAT TERM 1403 1395302 - 1395318 + g 82 -7.3 -4.68705 | CCCAATGGACATTTA TGCCATT TTT AGTGGCA TTTTGTTCAAATTCT Cla_1454 1396267 - 1395530 - | cysteine-rich domain protein TERM 1404 1396139 - 1396154 + g 91 -9 -4.70659 | AAATGAGGGTTGAGA GCAGCA AGTT TGCTGC TTTTTAAATATAACC lctP 1397932 - 1396277 - | L-lactate permease TERM 1405 1397123 - 1397137 + g 75 -7.2 -4.13282 | opp_overlap 1397122 TAATCTAAAAATATT TTTTGG CTT CCAAAA TTTTAAAAATATCGT TERM 1406 1398086 - 1398072 - R 73 -2.2 -5.74684 | overlap 1398076 TAATAAAAACAAAAA TTTATA CTT TACAAA TGAAATATAAAGTAT TERM 1407 1398213 - 1398188 - R 77 -8.4 -3.64599 | TCATCACACTTTAAA GCTAAAAGCA TGATTT TGCTTTCAGC TTGGCACTATGGAGT Cla_1456 1399699 - 1398209 - | hypothetical protein TERM 1408 1398359 - 1398341 - G 73 -6 -4.56775 | ATCTTTTTCCAAAAA GCTTCC AAACACA GGAAGC ATTAAACTAGGTTTT TERM 1409 1398831 - 1398820 - G 83 -2.2 -5.86976 | GTACAAAAGAAAAAA CGCT AAAA AGCA TGATGATGATAAGTA Cla_1457 1403469 - 1399699 - | type IIS restriction/modification enzyme TERM 1410 1401138 - 1401148 + g 72 -5.4 -4.8384 | opp_overlap 1401138, overlap 1401142 ATATACTCTCATAAA GCTT TTT AAGC TTTTTAAATTCTTTC TERM 1411 1401918 - 1401930 + g 70 -4.1 -4.93696 | overlap 1401919 AAATGCGTATGGAAT TTAGC AAG GCTAG TTTTTGCTCTTTAGA TERM 1412 1402484 - 1402498 + g 70 -4.4 -4.94902 | GGAATTTTTTCATAG TTTAAA AAT TTTAAA TTTTTATCATCGTTA torC 1403667 - 1404245 + | trimethylamine N-oxide reductase, cytochrome c-type subunit torA 1404247 - 1406766 + | trimethylamine N-oxide reductase, catalytic subunit TERM 1413 1406764 - 1406816 + T 93 -10.9 -4.39287 | opp_overlap 1406775, overlap 1406763 1406773 1406775 CCAAAATTTGCTAAT TAATTTTTAAATCTTTCTTGGAAGA AAA TCTTCCAAGAAAGATATTTAAATAA TTTTCATCTAATTAA TERM 1414 1406773 - 1406807 + T 100 -16 -3.76411 | opp_overlap 1406775, overlap 1406764 1406775 GCTAATTAATTTTTA AATCTTTCTTGGAAGA AAA TCTTCCAAGAAAGATA TTTAAATAATTTTCA TERM 1415 1406805 - 1406775 - T 100 -18.6 -3.62478 | opp_overlap 1406773 1406764 1406775 TAATTAATTTTTAAA TCTTTCTTGGAAGA AAA TCTTCCAAGAAAGA TATTTAAATAATTTT TERM 1416 1406775 - 1406805 + T 100 -18.6 -3.45527 | opp_overlap 1406775, overlap 1406773 1406764 TAATTAATTTTTAAA TCTTTCTTGGAAGA AAA TCTTCCAAGAAAGA TATTTAAATAATTTT Cla_1460 1407807 - 1407505 - | hypothetical protein TERM 1417 1407660 - 1407650 - G 74 -6.8 -4.3586 | overlap 1407658 CCACCTATATTAAAA GCAC TAA GTGC AGTAGAACCTAATAC TERM 1418 1408660 - 1408677 + r 85 -4.3 -5.8901 | opp_overlap 1408660 AATAAATTTAGATTA TAAAATA TCTT TATTTTA TTTTTTATTTTATGT TERM 1419 1408855 - 1408845 - R 74 -5.4 -4.73388 | AAGCTTTATTAAAAA CCTT AAC AAGG AAGTGATGCTTATAA TERM 1420 1411507 - 1411524 + r 91 -11.3 -3.66803 | opp_overlap 1411506 1411505, overlap 1411511 TGCAGTCCTACAACC CCCAGTG CAAG CACTGGG TTTGCCCTCTTACGC TERM 1421 1412445 - 1412458 + r 77 -5.3 -5.08088 | opp_overlap 1412445 1412446 AGAAAAGCTAAAAAA GCAAA GCAG TTTGC TTTTTCTTAACGCTT TERM 1422 1412458 - 1412445 - R 85 -5.3 -5.28315 | opp_overlap 1412445, overlap 1412446 AGAAAAGCTAAAAAA GCAAA GCAG TTTGC TTTTTCTTAACGCTT TERM 1423 1412505 - 1412524 + r 74 -5.1 -4.76644 | CACTCTCCCAGCTGA GCTAATT CCCCAA AATTAGC TTTTTCATCAATCTT TERM 1424 1412643 - 1412626 - R 74 -9.1 -3.07291 | opp_overlap 1412626 AAGGAGGTGATCCAA CCGCAGG TTCT CCTACGG TTACCTTGTTACGAC TERM 1425 1413519 - 1413539 + r 77 -8.3 -3.53343 | CAGTTTCCCAAGCAG TTCAACGGT TAA GCCGTTGGA TTTCACAAGAGACTT TERM 1426 1414145 - 1414164 + r 79 -8 -3.90762 | TTGGATAAGTTTAAT CTTTTTCT TCAA AGAAAAAG TGTTTTTAAAGACTA TERM 1427 1415407 - 1415421 + r 72 -7.8 -3.322 | CGAACCTCTGACCTA CGGCTT AGA AGGCCG TTGCTCTATCCAGCT TERM 1428 1415805 - 1415781 - R 100 -8.8 -5.48063 | opp_overlap 1415781 AGTCAAGATAAAAAA TATTTAGCAT AAAAA ATGCTAAATA TTTTAAGAATTATTT TERM 1429 1415781 - 1415805 + r 84 -8.8 -4.17523 | opp_overlap 1415781 AGTCAAGATAAAAAA TATTTAGCAT AAAAA ATGCTAAATA TTTTAAGAATTATTT Cla_1471 1416530 - 1415808 - | integral membrane protein, TerC family TERM 1430 1416453 - 1416443 - G 70 -4 -4.86033 | AAATCGCTAGAAAAA TGAT ATT ATCA ATCCCTAGCACAATC purN 1417144 - 1416572 - | phosphoribosylglycinamide formyltransferase TERM 1431 1416962 - 1416985 + g 72 -6.8 -4.15543 | overlap 1416954 AAATTTTTCATGTTC TATGATCTTG GTAT CAAGACCATA TTTTAAAGCTCTTTG Cla_1473 1418481 - 1417135 - | conserved hypothetical protein, possible sugar kinase TERM 1432 1418063 - 1418075 + g 72 -2.7 -5.43866 | overlap 1418055 1418054 GCTATTTTTAAAGCT TTGCT TTT AGTAA TTTTTTTAAAAATTC rmuC 1419805 - 1418465 - | DNA recombination protein RmuC TERM 1433 1419274 - 1419297 + g 72 -6.8 -4.10731 | opp_overlap 1419276 CAATATGAGTTTTAA GACTAACTTC ATTT GAATTTAGTC TTTCATTGTATTCTT Cla_1475 1420497 - 1419808 - | hypothetical protein TERM 1434 1420105 - 1420093 - G 85 -2.7 -5.96894 | ATCTAAATAAAAAAA TTCAC TAA ATGAA TTCACATAAGATTTT Cla_1476 1422014 - 1420506 - | Mg chelatase-related protein def 1422532 - 1422011 - | peptide deformylase TERM 1435 1422082 - 1422072 - G 70 -4 -5.00616 | TGGCGTTTTAAAAAA GAAA GTT TTTC TATAAACAAATGCCC Cla_1478 1423569 - 1422529 - | conserved hypothetical protein, possible diguanylate cyclase TERM 1436 1422941 - 1422956 + g 74 -3.3 -5.35222 | TGATAATTATATTTT GCATT ACTTTC AATGC TTTTTTCTAAATTTT clpP 1424174 - 1423584 - | ATP-dependent ClpAP/ClpXP protease, proteolytic subunit ClpP TERM 1437 1423884 - 1423869 - G 74 -5.4 -4.9445 | ACAACTAAGTAAAAA TGCACC CATT GATGCA GCTTGACCTATACAA tig 1425493 - 1424174 - | trigger factor TERM 1438 1424610 - 1424640 + g 88 -5.6 -5.59502 | opp_overlap 1424610, overlap 1424612 GCTTCTGCAAATTGA TTTTTAAGCTCATC GTT GATAAGTTTAAAGA TTTTTTCATTTTTTA TERM 1439 1425357 - 1425343 - G 74 -8.6 -3.26433 | opp_overlap 1425345 TAAGTATAGCAGCAA CAGGAA CTT TTCCTG CTCTAAAACCATCCA TERM 1440 1425915 - 1425888 - g 89 -7 -5.40625 | opp_overlap 1425888 1425890, overlap 1425890 ATACCAGATAAAAAA GTCGTAGGACTT AGTA AAATCCCACGTC TTGTAGAAGTTTTTG folE 1425603 - 1426175 + | GTP cyclohydrolase I fliI 1426175 - 1427485 + | flagellum-specific ATP synthase FliI TERM 1441 1427771 - 1427755 - g 85 -2.3 -6.00814 | AACAATCAAAAAAAA TCATTTA TTA TTAATGA TAAAAAAATACTAAA Cla_1483 1427539 - 1428027 + | hypothetical protein Cla_1484 1428083 - 1428262 + | hypothetical protein Cla_1485 1428341 - 1429486 + | hypothetical protein TERM 1442 1429588 - 1429576 - f 83 -4.9 -5.5353 | overlap 1429587 TATATTAACAAAAAA GATAA AAA TTATC CTAATTAAAGGAGTG iscS 1429609 - 1430787 + | cysteine desulfurase/aminotransferase, IscS/NifS family TERM 1443 1431054 - 1431030 - g 77 -7.1 -4.35926 | ATGCTAAATTTAAAA GCTTTGGCTGT GGT ACAGCAATAGC AAGTAGTGACACTAT iscU 1430798 - 1431769 + | NifU-like protein TERM 1444 1431764 - 1431788 + F 95 -11.6 -3.75332 | overlap 1431762 ATACGCGTTATACCT GTTTAAGCAG TTTTT CTGCTTAAAC TTTAAATTCAAGCCT nhaA1 1431850 - 1433010 + | Na+/H+ antiporter TERM 1445 1433056 - 1433081 + G 89 -10.6 -3.79445 | TTGAAATTTTAGGAG GATTGTTGCT TTTATT AGCAACAATC TTTGCCTTGCTACTT nhaA2 1433007 - 1434161 + | Na+/H+ antiporter Cla_1491 1435136 - 1434510 - | conserved hypothetical integral membrane protein (UPF0126 domain protein) TERM 1446 1435148 - 1435173 + r 71 -4.7 -4.87291 | opp_overlap 1435142 1435140 1435152, overlap 1435140 1435152 GCATAATGAGTTTAA AAAACCCTTGT TAAA ACAAGGGTTAA TTTTTACTTACAATA TERM 1447 1435169 - 1435152 - R 100 -9.9 -5.07053 | opp_overlap 1435140 1435148 1435152, overlap 1435140 AATGAGTTTAAAAAA CCCTTGT TAAA ACAAGGG TTAATTTTTACTTAC TERM 1448 1435152 - 1435169 + r 88 -9.9 -3.88182 | opp_overlap 1435140 1435152, overlap 1435140 1435148 AATGAGTTTAAAAAA CCCTTGT TAAA ACAAGGG TTAATTTTTACTTAC Cla_1492 1436213 - 1435170 - | hypothetical protein aroC 1437356 - 1436268 - | chorismate synthase rnc 1438021 - 1437353 - | ribonuclease III TERM 1449 1437460 - 1437472 + g 77 -4.9 -5.31275 | CTTGAATTTTTATAG CAATT TCA AATTG TTTTTTATGATCAGG rnhA 1438454 - 1438014 - | ribonuclease HI TERM 1450 1438284 - 1438296 + g 76 -7.7 -3.96892 | ACATGGTTCTTTTAA GGCTT TTA AAGCC TTTATGATAGCCATT Cla_1496 1439413 - 1438451 - | hypothetical protein TERM 1451 1438531 - 1438520 - G 83 -3 -5.73339 | opp_overlap 1438520 ACAATGATAAAAAAA CAAA GGAT TTTG ATTTTTACAATTATC TERM 1452 1438817 - 1438830 + g 76 -2.5 -5.66229 | ATCTTTTGAAAGGGC TAAAA TTTC TTTTA TTTTTTGTTCTTGCT TERM 1453 1438872 - 1438885 + g 76 -5.3 -5.04597 | opp_overlap 1438872 GCTTGAATTTTCAAA GCTTT TATC AAAGC TTTTTCTATATAGAT dnaG 1439488 - 1441275 + | DNA primase Cla_1498 1441341 - 1442324 + | hypothetical protein TERM 1454 1442343 - 1442326 - T 90 -9.9 -4.14397 | opp_overlap 1442326, overlap 1442302 ATTTTATAAATTAAA CTACCCT TTAA AGGGTAG TTTTTTAGAATTTCT TERM 1455 1442326 - 1442343 + T 100 -9.9 -5.1361 | opp_overlap 1442302 1442326 ATTTTATAAATTAAA CTACCCT TTAA AGGGTAG TTTTTTAGAATTTCT Cla_1499 1444432 - 1442348 - | MCP-domain signal transduction protein TERM 1456 1443134 - 1443150 + g 71 -6.6 -4.0031 | CACAAGTTTAGGATT TACAGG ATTTG CCTGTA TTCTTTGATCAAAAT TERM 1457 1444508 - 1444498 - R 87 -2.6 -6.17184 | opp_overlap 1444498 1444507, overlap 1444507 ATTATTAAAAAAAAA TAAA AAA TTTA TTTAAAATATAGAAT TERM 1458 1444507 - 1444533 + r 81 -5.4 -5.25976 | opp_overlap 1444498 1444507 1444516, overlap 1444498 AAAAAATAAAAAATT TATTTAAAATAT AGA ATATATTAAATA TTTATTTTTTTACTT pbpC2 1446812 - 1444608 - | penicillin-binding protein 1C TERM 1459 1445994 - 1446010 + g 80 -2.3 -5.76633 | TTCTTTAGCCTTTTC TTCAAAT TTG ACTTGAA TTTTTTTATCTATAC TERM 1460 1446779 - 1446752 - G 100 -12.2 -4.86613 | overlap 1446753 1446771 1446774 CAAAACTAAAATAAA CTAAGCCTATGT AAAA ACATAGGCTTAA AAAGCATACTACAAG TERM 1461 1446778 - 1446753 - G 100 -13.5 -3.49527 | overlap 1446752 1446771 1446774 AAAACTAAAATAAAC TAAGCCTATGT AAAA ACATAGGCTTA AAAAGCATACTACAA Cla_1501 1452094 - 1446809 - | alpha-2-macroglobulin family N-terminal region domain protein TERM 1462 1447449 - 1447482 + g 90 -6.1 -5.59357 | gap 1, overlap 1447457 AAAGCATAACCTGTG CTTT-GAGTGCTAAGC CAA GCTTGGCTTTCTAAAG TTTTTTTAATATCAT TERM 1463 1447457 - 1447473 + g 82 -8.7 -3.99917 | overlap 1447449 ACCTGTGCTTTGAGT GCTAAGC CAA GCTTGGC TTTCTAAAGTTTTTT TERM 1464 1447784 - 1447808 + g 71 -5.9 -4.48743 | opp_overlap 1447784 1447782 1447788, overlap 1447788 TAGAGCTAAAAGATA TAAAGAATTTA TTC TAATTTCTTTA TTTGTTTGAGCTTTT TERM 1465 1448020 - 1448030 + g 76 -2.6 -5.5943 | overlap 1448005 TTAACAATGCATTGA TATT GTT AATA TTTTTTTGCTCATTT TERM 1466 1448913 - 1448928 + g 70 -6.1 -4.09739 | opp_overlap 1448912 1448913 TTTTGGTAAAAATAC CCCCA AATATC TGGGG TTTTAAAAGCATTCA Cla_1502 1452195 - 1452557 + | hypothetical protein TERM 1467 1452588 - 1452559 - f 87 -11.7 -2.51187 | opp_overlap 1452564, overlap 1452564 AAAGAGCTTATTAAG CAAAATAACTCCT AAAA AGGAGTTATTTTA ATGCGTTTATTTCTT TERM 1468 1452583 - 1452564 - f 89 -9.4 -4.45544 | opp_overlap 1452564, overlap 1452559 GCTTATTAAGCAAAA TAACTCCT AAAA AGGAGTTA TTTTAATGCGTTTAT TERM 1469 1452564 - 1452583 + F 89 -9.4 -4.33767 | opp_overlap 1452564 1452559 GCTTATTAAGCAAAA TAACTCCT AAAA AGGAGTTA TTTTAATGCGTTTAT Cla_1503 1452589 - 1452903 + | hypothetical protein Cla_1504 1454774 - 1452900 - | conserved hypothetical integral membrane protein, mechanosensitive ion channel family TERM 1470 1454129 - 1454119 - G 88 -4 -5.68438 | TCATTAAATAAAAAA TTAG TTT CTAA CAACTTTGCATTATT TERM 1471 1454391 - 1454380 - G 88 -4.4 -5.71295 | ACACAAAAATAAAAA TGCT CTGA AGCA ACTAATTTTAGTAAA cynT 1455403 - 1454771 - | carbonic anhydrase TERM 1472 1454863 - 1454875 + g 76 -2.7 -5.63517 | TGTAATACCAAGCAT GAAGT TCG ATTTC TTTTTTATTTAAAGC Cla_1506 1455563 - 1456264 + | conserved hypothetical integral membrane protein (UPF0005 domain protein) TERM 1473 1456267 - 1456288 + F 100 -11.7 -4.61852 | opp_overlap 1456267 TAATAGCAGATAAAA TTTGCGAGA ATAT TCTCGCAAA TTTCTTTATACTCTT TERM 1474 1456288 - 1456267 - f 100 -11.7 -4.61147 | opp_overlap 1456267 TAATAGCAGATAAAA TTTGCGAGA ATAT TCTCGCAAA TTTCTTTATACTCTT secG 1456364 - 1456708 + | preprotein translocase, SecG subunit frr 1456719 - 1457276 + | ribosome releasing factor TERM 1475 1457415 - 1457439 + G 76 -7.9 -3.89291 | opp_overlap 1457414 TTGCAGGAAAATTAT GCGATGAACTT GCA AAGATTATCGC TTCTTATGATATTAA pyrE 1457279 - 1457887 + | orotate phosphoribosyltransferase TERM 1476 1458110 - 1458088 - g 76 -2.6 -5.52384 | opp_overlap 1458088 1458096 1458099 TTTTTAGTAAAAAAA GCTCAAAGTC CTG GGCTTAAAGC TTATGATTTATATTT Cla_1510 1457887 - 1458303 + | conserved hypothetical protein (RDD domain protein) nrdB 1458300 - 1459322 + | ribonucleoside-diphosphate reductase, beta subunit Cla_1512 1459624 - 1461141 + | disulfide bond formation protein, DsbB family TERM 1477 1461141 - 1461168 + F 84 -9.2 -4.11692 | opp_overlap 1461142 1461143, overlap 1461142 TTATACACTTGATTA ATCTTAAGGCGT TTTT ACGCCTTAAGGA TTTTAAAGCTAGATA TERM 1478 1461167 - 1461142 - f 85 -10.5 -3.18239 | opp_overlap 1461141 1461142, overlap 1461143 TATACACTTGATTAA TCTTAAGGCGT TTTT ACGCCTTAAGG ATTTTAAAGCTAGAT TERM 1479 1461142 - 1461167 + F 100 -12.7 -3.06694 | opp_overlap 1461142 1461143, overlap 1461141 TATACACTTGATTAA TCTTAAGGCGT TTTT ACGCCTTAAGG ATTTTAAAGCTAGAT TERM 1480 1461166 - 1461143 - f 100 -14 -2.50622 | opp_overlap 1461142 1461141, overlap 1461142 ATACACTTGATTAAT CTTAAGGCGT TTTT ACGCCTTAAG GATTTTAAAGCTAGA TERM 1481 1461270 - 1461256 - g 73 -5.7 -4.63592 | TTTGAACAAAAACAA TGCCA AACTA TGGCA GAAGAAATTCGCAAA pimT 1461229 - 1461861 + | protein-L-isoaspartate O-methyltransferase TERM 1482 1462230 - 1462220 - g 74 -5.4 -4.95155 | GTTATACTATAAAAA TGCA TTT TGCA AGCAATGGAAGTCAC Cla_1514 1461952 - 1462692 + | conserved hypothetical protein, putative carbonic anhydrase Cla_1515 1463336 - 1462704 - | hypothetical protein typA 1465144 - 1463336 - | GTP-binding protein TypA Cla_1517 1465272 - 1465610 + | hypothetical protein TERM 1483 1466298 - 1466272 - g 76 -3.9 -5.36364 | gap 1 GTAAAAATATAAAAA GCAAAGAAA-AC GAAG GTGTTTCTTTAC TTTCTTCTGCTTTAA Cla_1518 1465614 - 1467296 + | hypothetical protein flgD 1467347 - 1468354 + | flagellar hook assembly protein FlgD TERM 1484 1469956 - 1470013 + G 81 -3.8 -5.626 | gap 2, opp_overlap 1469964 1469968 1469972, overlap 1469965 1469968 1469969 CTGCTGATCAAATGA TACAAAAAGCAATCAACATGAAACGCTA ATTT TAGCCTTTCATGATGGTT-CTT-TTGAA TTTTTTTCTAAAATA flgE2 1468359 - 1469984 + | flagellar hook protein FlgE TERM 1485 1470006 - 1469964 - T 72 -4.3 -5.06585 | gap 1, opp_overlap 1469956 1469965 1469968 1469969, overlap 1469968 1469972 CAAATGATACAAAAA GCAATCAACATGAAACGCTA ATTT TAGCCTTTCATGATGGTT-C TTTTGAATTTTTTTC TERM 1486 1469965 - 1470006 + T 78 -6.7 -4.57275 | opp_overlap 1469964 1469968 1469972, overlap 1469956 1469968 1469969 AAATGATACAAAAAG CAATCAACATGAAACGCTA ATTT TAGCCTTTCATGATGGTTC TTTTGAATTTTTTTC TERM 1487 1469968 - 1470003 + T 85 -8.4 -4.32905 | opp_overlap 1469968 1469964 1469972, overlap 1469965 1469956 1469969 TGATACAAAAAGCAA TCAACATGAAACGCTA ATTT TAGCCTTTCATGATGG TTCTTTTGAATTTTT TERM 1488 1469969 - 1470002 + T 78 -9.7 -3.17303 | opp_overlap 1469968 1469964 1469972, overlap 1469968 1469965 1469956 GATACAAAAAGCAAT CAACATGAAACGCTA ATTT TAGCCTTTCATGATG GTTCTTTTGAATTTT TERM 1489 1469999 - 1469972 - T 84 -10 -3.58361 | opp_overlap 1469969 1469968 1469965 1469956, overlap 1469968 1469964 ACAAAAAGCAATCAA CATGAAACGCTA ATTT TAGCCTTTCATG ATGGTTCTTTTGAAT Cla_1521 1470438 - 1469995 - | hypothetical protein Cla_1522 1471817 - 1470591 - | hypothetical protein TERM 1490 1471484 - 1471473 - G 73 -5.8 -4.56597 | opp_overlap 1471473 TTTGCCTTGTAAAAA CGCT TCAT AGCG TTTTAAAAACTCGCC fic 1472591 - 1471983 - | cell filamentation protein TERM 1491 1472602 - 1472640 + r 72 -7.8 -3.36128 | opp_overlap 1472606 1472625 1472632, overlap 1472592 1472594 1472606 1472625 ATCATTTTAAACCTT TAAAGTTTATATTTTATA AGA TATTTAATATAAACTTTA TTAAATTTATGATTT Cla_1524 1473634 - 1472654 - | ABC transporter, ATP-binding protein TERM 1492 1472935 - 1472918 - G 77 -4.9 -5.28176 | TGGATCTATAAAAAA TGCTTCT CCTA AAAAGCA AGCGCTATCTATATT Cla_1525 1475217 - 1473637 - | ABC transporter, permease protein TERM 1493 1474783 - 1474763 - G 71 -5.6 -4.49389 | AGTCCATAAGCAAAA GTATTTTT AGCAA AAAAATAC ACATAAGGATAAAGT TERM 1494 1474925 - 1474913 - G 70 -4.1 -4.94058 | TCAATCCAAACAAAA CCCAT TAC ATAGG AAGGTATAGCCAAGG TERM 1495 1475198 - 1475182 - G 93 -5.8 -6.02914 | GCTACAGAAAAAAAA GGTGGC AAAAG ACCACC TTAGACTTAAGAATT Cla_1526 1476239 - 1475235 - | ABC transporter, periplasmic binding protein Cla_1527 1476429 - 1476857 + | conserved hypothetical protein, putative flavohemoprotein TERM 1496 1476858 - 1476882 + T 78 -10.1 -2.72028 | opp_overlap 1476859, overlap 1476857 1476856 GCAAAAAATAAATAA ATAGGCTTTGA TTT TCAAAGCCTAA AATTTTTCTACTGCA TERM 1497 1476881 - 1476859 - T 100 -13.6 -5.00234 | opp_overlap 1476858 1476857 1476856 CAAAAAATAAATAAA TAGGCTTTGA TTT TCAAAGCCTA AAATTTTTCTACTGC Cla_1528 1478507 - 1476879 - | ABC transporter, ATP-binding protein TERM 1498 1478074 - 1478063 - G 74 -3 -5.38839 | GACACAAAAAGAAAA TTTC CAAA GAAA GATAAGCTATATAAG TERM 1499 1478120 - 1478102 - G 72 -6.8 -4.07526 | opp_overlap 1478100, overlap 1478105 AAGCACTTACACAAA CAATCAAA ACA CTTGATTG TATAAATTCAGGAAG TERM 1500 1478810 - 1478797 - H 86 -8.1 -4.70266 | overlap 1478800 AAGACTACCTAAAAA CCACC TCAT GGTGG GGGGGGGGGAATGAT TERM 1501 1478985 - 1479006 + H 72 -8.9 -2.74188 | opp_overlap 1478985, overlap 1478984 1478987 TATATTATTGAAAAA CATCATTAT GAGA ATAATGATG CTTATGATTATAATC TERM 1502 1479006 - 1478985 - H 91 -8.9 -4.69664 | opp_overlap 1478985 1478984 1478987 TATATTATTGAAAAA CATCATTAT GAGA ATAATGATG CTTATGATTATAATC TERM 1503 1479683 - 1479699 + H 72 -8.1 -3.41051 | GAGAGAATGACCCAT GTAATTG GAG CAATTAC TTATAATGGCAATGC TERM 1504 1481201 - 1481187 - H 95 -7.2 -5.43553 | ATGTAAAAAATAAAA GCATTA TTT TAATGC AAAGTGAAAAAGGCT TERM 1505 1481350 - 1481336 - H 75 -7.2 -4.03085 | GCACAAAAAGTTAAA TACACT CTA AGTGTA AGTAATGATGCAAAA TERM 1506 1481960 - 1481933 - g 76 -6.5 -4.67904 | opp_overlap 1481921 1481933 1481935 TATTAATGCTAAAAA CATTACTTTAC AAGGTA ATAAAGTAATG TTAAGTGCTGATACT TERM 1507 1484596 - 1484586 - g 74 -6.8 -4.21073 | GGAAAAAAAGAAATA GAGG AAA CCTC ACTCGCACAAAAAAA Cla_1530 1481415 - 1484672 + | conserved hypothetical protein, hemagglutination domain protein Cla_1531 1484741 - 1486534 + | hypothetical protein ctsG 1487103 - 1486531 - | putative Campylobacter transformation system protein CtsG TERM 1508 1486698 - 1486708 + g 72 -4 -5.13473 | overlap 1486707 GATTTTTAGTATCTT TCAA AGC TTGA TTTTTTAAATCTGCT TERM 1509 1486918 - 1486930 + g 75 -4.9 -5.1675 | CATTAAAGCTATACT TGAAA GAC TTTCA TTTTTTAATACATAA gcp 1488107 - 1487100 - | O-sialoglycoprotein endopeptidase Cla_1534 1489492 - 1488104 - | hypothetical protein TERM 1510 1488290 - 1488300 + g 75 -4 -5.22943 | TTGTCGTTTTTTATC GATA GAA TATC TTTTTTGCATTTGAT TERM 1511 1489063 - 1489076 + g 82 -6.7 -5.00765 | overlap 1489074 TAATACTAGTATTAC CCCAA CGAT TTGGG TTTTTATCCTTGCTT dxr 1490568 - 1489489 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1512 1490603 - 1490575 - R 70 -7.5 -3.6284 | overlap 1490589 AACGATCATGCTAAA GTTGCCATTGCAA ATG CTGCAATGATAAC AGCATCAATTCTATC cdsA 1491293 - 1490565 - | phosphatidate cytidylyltransferase Cla_1537 1491625 - 1491305 - | hypothetical protein TERM 1513 1491528 - 1491544 + g 74 -9.5 -2.87354 | opp_overlap 1491526 1491525, overlap 1491525 ATATTTACCAAAGTT GCAAAAG AAT CTTTTGC TAGTTCATTGCTTGC Cla_1538 1492932 - 1491628 - | conserved hypothetical protein (DUF814 domain protein), putative fibronectin/fibrinogen binding protein TERM 1514 1492475 - 1492497 + g 72 -4.2 -5.02201 | opp_overlap 1492481, overlap 1492478 1492481 AATTCTTCTTTGATC TCATAAGCTT TTA AAGCTTGTAA TTTTTCTCCTATTTT mobA 1492974 - 1493552 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 1515 1493569 - 1493537 - T 77 -8.7 -3.60569 | gap 1, opp_overlap 1493540 1493547, overlap 1493535 1493539 1493540 1493547 1493559 TAAAAAATGGAAACA TATGCTAAAAGCCT AAAAAA AGGCTTTTAGC-TA GTTAAAGTAAGCAAA TERM 1516 1493568 - 1493539 - T 80 -9.4 -3.34803 | opp_overlap 1493540 1493547, overlap 1493537 1493535 1493540 1493547 1493559 AAAAATGGAAACATA TGCTAAAAGCCT AAAAAA AGGCTTTTAGCT AGTTAAAGTAAGCAA TERM 1517 1493567 - 1493540 - T 95 -12.9 -2.59255 | opp_overlap 1493540 1493547, overlap 1493539 1493537 1493535 1493547 1493559 AAAATGGAAACATAT GCTAAAAGCCT AAAAAA AGGCTTTTAGC TAGTTAAAGTAAGCA TERM 1518 1493540 - 1493567 + T 95 -12.9 -2.73364 | opp_overlap 1493540 1493539 1493537 1493535 1493547 1493559, overlap 1493547 AAAATGGAAACATAT GCTAAAAGCCT AAAAAA AGGCTTTTAGC TAGTTAAAGTAAGCA Cla_1540 1494923 - 1493571 - | Na+/H+ antiporter family protein TERM 1519 1494895 - 1494878 - G 72 -4.1 -5.11475 | TAAAAAAACACAAAA GCGTCAT TAAT ACAACGC CTATAAATACCGGAT ilvD 1495058 - 1496734 + | dihydroxyacid dehydratase TERM 1520 1496735 - 1496766 + F 79 -8.4 -3.71913 | gap 1, opp_overlap 1496735 1496736, overlap 1496733 1496736 TTAGATTTAGAATAA T-TTTCTTAATTTCT TTA AGAAATTAAGAAATA TCTTTTAAATGTGAA TERM 1521 1496765 - 1496735 - f 85 -10 -3.83568 | opp_overlap 1496735 1496733 1496736, overlap 1496736 TTAGATTTAGAATAA TTTTCTTAATTTCT TTA AGAAATTAAGAAAT ATCTTTTAAATGTGA TERM 1522 1496736 - 1496764 + F 100 -13.5 -3.43676 | opp_overlap 1496735 1496736, overlap 1496735 1496733 TAGATTTAGAATAAT TTTCTTAATTTCT TTA AGAAATTAAGAAA TATCTTTTAAATGTG TERM 1523 1496764 - 1496736 - f 100 -13.5 -2.89659 | opp_overlap 1496736 1496735 1496733, overlap 1496735 TAGATTTAGAATAAT TTTCTTAATTTCT TTA AGAAATTAAGAAA TATCTTTTAAATGTG TERM 1524 1497064 - 1497084 + F 71 -8.3 -2.89742 | overlap 1497067 ACGGAAGAAAAATTC CGAGGGATT TTA AGTCCCTTG TGTCTACCAATTCCA TERM 1525 1497153 - 1497169 + F 75 -9.5 -2.62983 | overlap 1497156 TCGAACTCGCGACCC CAACCTT GGC AAGGTTG TGCTCTACCCCTGAG TERM 1526 1498484 - 1498460 - g 81 -6.5 -5.1166 | overlap 1498453 CACTAAAACTAAAAA TGCTTTAGAAC AAG ATGCTAAAGCA GTAGAACAATCAGTT Cla_1546 1497363 - 1499345 + | MCP-domain signal transduction protein TERM 1527 1499384 - 1499360 - f 100 -10.2 -4.86773 | opp_overlap 1499360 1499366 GAAAATTAGCAAAAA CATTAACTCT ATTTA AGAGTTAATG TTAATAATATTGTAT TERM 1528 1499360 - 1499384 + F 82 -10.2 -3.29782 | opp_overlap 1499360, overlap 1499366 GAAAATTAGCAAAAA CATTAACTCT ATTTA AGAGTTAATG TTAATAATATTGTAT TERM 1529 1500588 - 1500564 - g 81 -6.5 -5.1166 | overlap 1500557 CACTAAAACTAAAAA TGCTTTAGAAC AAG ATGCTAAAGCA GTAGAACAATCAGTT Cla_1547 1499476 - 1501449 + | MCP-domain signal transduction protein TERM 1530 1501486 - 1501451 - T 70 -7.7 -3.6445 | opp_overlap 1501454 1501455, overlap 1501454 1501458 AGAAGAAGTTTTAAA TAATCAACTAAACCC TTAATC GGGTTTAGGTGGTTA ATCGTCAAATTTTTG TERM 1531 1501455 - 1501482 + T 70 -8.5 -2.53012 | opp_overlap 1501454 1501451 1501458, overlap 1501454 GAAGTTTTAAATAAT CAACTAAACCC TTAATC GGGTTTAGGTG GTTAATCGTCAAATT TERM 1532 1501479 - 1501458 - T 79 -8.8 -3.61652 | opp_overlap 1501455 1501454, overlap 1501454 1501451 GTTTTAAATAATCAA CTAAACCC TTAATC GGGTTTAG GTGGTTAATCGTCAA Cla_1548 1501903 - 1501484 - | hypothetical protein Cla_1549 1503678 - 1501966 - | ATPase, AAA family protein Cla_1550 1504166 - 1503687 - | conserved hypothetical lipoprotein TERM 1533 1504070 - 1504090 + g 80 -6.9 -4.77757 | opp_overlap 1504070 1504075, overlap 1504072 AGGTTTTTAAAACAA TATAAGCAC TTT GTGCTTGTG TTTTGCTTTTTAAGA TERM 1534 1504072 - 1504088 + g 74 -7.3 -3.99386 | opp_overlap 1504070 1504075, overlap 1504070 GTTTTTAAAACAATA TAAGCAC TTT GTGCTTG TGTTTTGCTTTTTAA TERM 1535 1504085 - 1504075 - G 71 -6.8 -3.96534 | opp_overlap 1504072 1504070, overlap 1504070 TTTAAAACAATATAA GCAC TTT GTGC TTGTGTTTTGCTTTT Cla_1551 1504654 - 1504163 - | conserved hypothetical protein (DUF520 domain protein) Cla_1552 1505576 - 1504644 - | 2-hydroxyacid dehydrogenase family protein Cla_1553 1506748 - 1505576 - | glutathionylspermidine synthase family protein Cla_1554 1507384 - 1506758 - | conserved hypothetical lipoprotein Cla_1555 1508062 - 1507457 - | putative LysE family amino-acid efflux protein TERM 1536 1507848 - 1507833 - G 77 -7.6 -4.09627 | AAATACAAAAGATAA CAAGCT CCAA AGCTTG ATAAAATAATTTGCA TERM 1537 1508101 - 1508078 - R 70 -8.2 -3.22106 | opp_overlap 1508083, overlap 1508083 AAGAATTTAATCGAA GAAAAGCCGA AAAT TCGGCTTTTT TGGTATTAGAGTCTT TERM 1538 1508096 - 1508083 - R 86 -8.1 -4.72029 | opp_overlap 1508083, overlap 1508078 TTTAATCGAAGAAAA GCCGA AAAT TCGGC TTTTTTGGTATTAGA TERM 1539 1508083 - 1508096 + r 100 -8.1 -5.27779 | opp_overlap 1508078 1508083 TTTAATCGAAGAAAA GCCGA AAAT TCGGC TTTTTTGGTATTAGA rpsU 1508331 - 1508107 - | 30S ribosomal protein S21 TERM 1540 1508235 - 1508256 + g 77 -4.5 -5.28315 | opp_overlap 1508235 CACGAACTTCAGTAA CAACTAGAT TTCT ATCTACTTG TTTTTTGAATTTTCT TERM 1541 1508602 - 1508612 + G 72 -4 -5.17507 | TTATCAAAATCAATG GAAA TCA TTTC TTTTTATTAAGTTTT TERM 1542 1508619 - 1508644 + G 70 -3.5 -5.13354 | AATCATTTCTTTTTA TTAAGTTTT GATCATAA AAAACTTAA TTTATTTTTTATAGC TERM 1543 1509211 - 1509198 - g 71 -4.5 -4.75404 | opp_overlap 1509198, overlap 1509199 AAACTTTACCAAAAA CCACC ACAA GGTGA GTGTATAGGATGTGA TERM 1544 1509691 - 1509675 - g 74 -2.3 -5.59357 | overlap 1509676 ATTAGACCAAAAAAA CCTTTTA AAT TAAAAGC TGGAGAAAAAGACAA Cla_1557 1508505 - 1509881 + | putative ferredoxin-like protein TERM 1545 1509971 - 1509933 - g 100 -11.8 -4.73341 | overlap 1509924 AAAAAATCAAACAAA TTGCTGCGGAGTCGTTTT TAG AAAACGGCTACGAAGCAA CCAATCTCAAAGATA cmeR 1509878 - 1510504 + | transcriptional regulator, TetR family TERM 1546 1510540 - 1510553 + F 70 -3.9 -5.09895 | opp_overlap 1510546 AATCATAAAAATTTT GTAAT ATAA ATTAC TTTTTTAGCTAAATA TERM 1547 1511101 - 1511115 + G 84 -8.6 -4.21194 | ACACTGTAGTAAGCG CTCCAT TTG ATGGAG TTTTAGGTGATGCAC TERM 1548 1511476 - 1511514 + G 70 -6.1 -4.15841 | opp_overlap 1511481 1511482 ATGGCTTTGAAATTC CACAAGTTGCACTATTG CAAGA TGATAGTGCTACTTATG TTTATACTTTAGTAG cmeA 1510587 - 1511684 + | RND efflux system, membrane fusion protein CmeA TERM 1549 1514556 - 1514544 - g 83 -7.7 -4.5366 | TTAAAAAAGGCAAAA GCATC TTT GATGC AGCAATTAGCGCAGC cmeB 1511684 - 1514806 + | RND efflux system, inner membrane transporter CmeB TERM 1550 1515034 - 1515024 - g 70 -5.4 -4.6526 | opp_overlap 1515024 ATAAATTTGCAAAAA GCTT ATG AAGC TTTAGGTATAGCAAG TERM 1551 1515350 - 1515340 - g 70 -4 -4.90266 | GTGAGCAAGTAAAAA TTCT AGA AGAA ACAACCCAAAGTTAT cmeC 1514799 - 1516241 + | RND efflux system, outer membrane lipoprotein CmeC TERM 1552 1516257 - 1516235 - T 91 -12.2 -3.36919 | opp_overlap 1516228 1516235 1516238, overlap 1516238 AGAAAACTTTTATAA CAACTAAGTT TAA AACTTAGTTG TTAATGCATTTGAAT TERM 1553 1516235 - 1516257 + T 91 -12.2 -3.25356 | opp_overlap 1516235 1516238, overlap 1516228 1516238 AGAAAACTTTTATAA CAACTAAGTT TAA AACTTAGTTG TTAATGCATTTGAAT TERM 1554 1516254 - 1516238 - T 76 -8.1 -3.81022 | opp_overlap 1516235 1516228 1516238, overlap 1516235 AAACTTTTATAACAA CTAAGTT TAA AACTTAG TTGTTAATGCATTTG TERM 1555 1516238 - 1516254 + T 76 -8.1 -3.76176 | opp_overlap 1516238 1516235, overlap 1516235 1516228 AAACTTTTATAACAA CTAAGTT TAA AACTTAG TTGTTAATGCATTTG Cla_1562 1516479 - 1516258 - | hypothetical protein Cla_1563 1516527 - 1517858 + | radical SAM domain protein Cla_1564 1517916 - 1518593 + | conserved hypothetical protein, possible methyltransferase TERM 1556 1518621 - 1518594 - T 100 -11.5 -4.57057 | opp_overlap 1518594 1518592, overlap 1518591 ATAGGACAAAAATAA CGTTTTAAAGC GATCTT GCTTTAAAACG GCCTTACTACCATCA Cla_1565 1519063 - 1518614 - | conserved hypothetical integral membrane protein (UPF0093 domain protein) lspA 1519511 - 1519044 - | signal peptidase II, peptidase A8 family Cla_1567 1520841 - 1519504 - | phosphoglucomutase/phosphomannomutase family protein TERM 1557 1521931 - 1521921 - g 75 -4 -5.23016 | AAAGAAGGTAAAAAA TTTG ACG CAAA TGGGCAAACTATTTT Cla_1568 1520973 - 1522148 + | hypothetical protein Cla_1569 1522145 - 1523335 + | ATPase, AAA family protein TERM 1558 1523341 - 1523325 - T 70 -2.4 -5.59357 | ATGATATGAAAAAAA TTAAAA AGTGA TTTTAA GCACAATGTAAAAAT TERM 1559 1523404 - 1523430 + T 75 -9.4 -2.61274 | opp_overlap 1523409, overlap 1523403 1523406 GTAGCTCAGTTGGTA GAGCACCACCTT GAC ATGGTGGTGGTC GTTGGTTCAAGTCCA Cla_1571 1524104 - 1523484 - | conserved hypothetical protein (DUF305 domain protein) Cla_1572 1524226 - 1524858 + | hypothetical protein ruvC 1525337 - 1524861 - | crossover junction endodeoxyribonuclease RuvC TERM 1560 1524936 - 1524920 - G 72 -8.1 -3.24902 | opp_overlap 1524918 1524920 CAATAGCATCAGTAA TATCAAG TGG CTTGATA TCTTTTGAAATTCCA TERM 1561 1524920 - 1524936 + g 74 -8.1 -3.69618 | opp_overlap 1524920, overlap 1524918 CAATAGCATCAGTAA TATCAAG TGG CTTGATA TCTTTTGAAATTCCA TERM 1562 1525153 - 1525167 + g 81 -7.2 -4.62471 | TCTTCTATAGCTACC TCATCA AAT TGATGA TTTTTAAAGATTAGA SEQUENCE gi|222778487|ref|NC_012040.1| Campylobacter lari RM2100 megaplasmid pCL2100, complete sequence (length 46201) TERM 1 138 - 124 - g 77 -5.8 -4.93079 | overlap 120 AATAAAACAAATAAA GTTTTT AGA AAAAAC ACTGAAGTTGTTGTA Cla_a001 1 - 1317 + | nickase/relaxase TERM 2 1344 - 1382 + T 100 -7.7 -5.64421 | opp_overlap 1344 1347 GTTTGTTTTAAAGAA TAACCGACTAATTAAAG CAAAA CTTTAATTAATCAGTTA TTTTTTCTTTAAACT TERM 3 1382 - 1344 - T 100 -12.8 -3.90744 | opp_overlap 1344, overlap 1347 GTTTGTTTTAAAGAA TAACCGACTAATTAAAGC AAA ACTTTAATTAATCAGTTA TTTTTTCTTTAAACT TERM 4 1379 - 1347 - T 90 -10.1 -4.08557 | opp_overlap 1344, overlap 1344 TGTTTTAAAGAATAA CCGACTAATTAAAGC AAA ACTTTAATTAATCAG TTATTTTTTCTTTAA Cla_a002 7195 - 1391 - | DNA methylase/helicase TERM 5 3228 - 3245 + g 70 -5.7 -4.21438 | overlap 3217 3238 GGAACAAAATCTTTT TGATATT TCAT AATATCA TTATTTGTTACGATA TERM 6 6034 - 6053 + g 76 -3.7 -5.40072 | TTTTATTTAAAGTAG GATTATT TGGATC AATAATC TTTTTTTGACCAAAG Cla_a003 7985 - 7383 - | site-specific recombinase/resolvase TERM 7 7536 - 7551 + g 75 -4 -5.30575 | overlap 7538 ACTATTAAAACTATT TGTAGG ACGA CCTATA TTTTTTCCATTTTTG TERM 8 8080 - 8046 - R 72 -8.2 -3.44527 | opp_overlap 8041 8050 TATGTATCATTACAA TATGTATATAATATTT TTT ATATATTACATACATA TCAAAATTATATTTT Cla_a004 8331 - 8107 - | hypothetical protein Cla_a005 9004 - 8336 - | plasmid partitioning protein TERM 9 9124 - 9144 + r 90 -5.6 -5.63517 | opp_overlap 9124 9130, overlap 9130 TGCTATACTATACAA TAACAATA AAAAA TATTGTTA TTTTTTATTTCAAAA Cla_a006 10090 - 9272 - | hypothetical protein TERM 10 10451 - 10427 - R 75 -4.5 -5.26918 | overlap 10439 ATAGTTTATAAAAAA TATATTTATAT ATT ATATAGATATA AGACACATAATTAAA Cla_a007 10894 - 10559 - | hypothetical protein Cla_a008 11349 - 11609 + | attachment mediating protein TraC/VirB2 TERM 11 11661 - 11679 + G 79 -10.3 -2.89848 | overlap 11660 GGATTAACACGCCCT GCACTCC TTTTT GGAGTGC CTTTAGTACCTTTTA Cla_a009 11616 - 14390 + | secretion/conjugal transfer ATPase VirB3/4 TERM 12 14565 - 14541 - g 100 -12.9 -3.53031 | overlap 14537 14548 CGGAGTGCAAATTAA GCCACAAGGGT GCG AACCTTGTGGC AAACACCCCAAAAAA Cla_a010 14387 - 15379 + | conjugal transfer protein VirB5 Cla_a011 15393 - 15977 + | putative antirepressor, Rha family TERM 13 16063 - 16046 - f 71 -6.9 -3.96337 | opp_overlap 16047, overlap 16047 GGAAAAATCATTAAA GCCCTGC TAAT GCAGGGT ATATCAATAAGCCTT TERM 14 16047 - 16062 + F 82 -10.4 -2.91383 | opp_overlap 16046 16047 GAAAAATCATTAAAG CCCTGC TAAT GCAGGG TATATCAATAAGCCT TERM 15 16062 - 16047 - f 83 -10.4 -2.96718 | opp_overlap 16047, overlap 16046 GAAAAATCATTAAAG CCCTGC TAAT GCAGGG TATATCAATAAGCCT TERM 16 16184 - 16161 - f 91 -11.1 -3.72576 | opp_overlap 16161, overlap 16168 CTGGGCGTTATTAAA TGCCAAAGG TAGCCG CCTTTGGCA TTCTACCCTTTACAA TERM 17 16161 - 16184 + F 90 -11.8 -3.39668 | opp_overlap 16161 16168 CTGGGCGTTATTAAA TGCCAAAGGT AGCC GCCTTTGGCA TTCTACCCTTTACAA Cla_a012 16476 - 16769 + | hypothetical protein TERM 18 16924 - 16948 + G 95 -11.5 -3.75863 | ATTAAGGGAGTTTGA GCTACGTAGAT TAA ATCGACGTAGC TTTGATACAGGTTTT TERM 19 17191 - 17176 - g 82 -7.6 -4.49389 | ACCTTATAAGGAAAA GATAGC AAAC GCTATC AAGGAAATAGAACAA Cla_a013 16766 - 17317 + | putative antirepressor, BRO family TERM 20 17397 - 17383 - f 79 -10 -3.10537 | opp_overlap 17370 17396, overlap 17378 TAGGGTAAAATTATA CCCCTT TAA AAGGGG CAAAGCTAATAAGCC TERM 21 17519 - 17497 - f 73 -8.4 -3.26947 | TAAGGGTTAGATTAA GCCATAGGGT TGC AGCCTACGGC TAACCCTTCGGGGTA TERM 22 18190 - 18204 + G 73 -5.8 -4.55383 | TTGCATTGCTTATTT CTAATA CCT TATTAG TTCTTTTTATGAGTT Cla_a014 17607 - 18617 + | conjugal transfer protein TrbL/VirB6 TERM 23 19025 - 19005 - g 72 -4.1 -5.08255 | AGTTTTAAAACAAAA TCTTTTTTT CAA AGAAAAAGA TGTGCAAATAATTGA Cla_a015 18607 - 19068 + | hypothetical protein TERM 24 19136 - 19118 - f 79 -8.8 -3.62275 | opp_overlap 19104, overlap 19104 AGGGATTATCCTAAA CCCTGCTA TAA TTGCAGGG AAATTAGTATGCCTT TERM 25 19866 - 19849 - g 73 -8.5 -3.44529 | GCACACAGCAATCAA CCAAAGT TATA ACTTTGG CGTATGATTTTTTAC Cla_a016 19359 - 19967 + | conjugal transfer protein TraJ/VirB8 TERM 26 20509 - 20523 + G 81 -6.4 -5.14563 | TGATAAAAATATAGT TCCTAG AAA CTGGGA TTTTTTAATGAAAGC Cla_a017 19964 - 20899 + | conjugal transfer protein TraK/VirB9 TERM 27 21933 - 21912 - g 70 -5.9 -4.24948 | TGATTATACGGAAAA TTCAAGAGA AACT TCTCGTGAA ATAGCTAATACTGCT Cla_a018 20896 - 22071 + | conjugal transfer protein TrbI/VirB10 Cla_a019 22071 - 23072 + | conjugal transfer protein VirB11 Cla_a020 23062 - 23637 + | hypothetical protein TERM 28 23941 - 23928 - g 85 -3.9 -5.75822 | overlap 23934 CAGAAATTAAAAAAA TGAAA TTAT TTTCA GACAATGGAATAATC TERM 29 25009 - 25031 + G 71 -3.4 -5.24129 | TGGAGCAAAAACTCT TTTGACTAAC CAT GCTTGTCAAA TTTTTTATACCCCAA Cla_a021 23627 - 25423 + | conjugal transfer protein TraG/VirD4 TERM 30 25638 - 25619 - g 73 -9.4 -2.57653 | overlap 25618 25617 25631 AAAAAATAAAGAAGG TTTGCTCA CTAA TGAGCAAA TAGTAAAAACTTTTC Cla_a022 25407 - 25844 + | conserved hypothetical protein, putative CagT Cla_a023 25965 - 26642 + | TrbM mating pair formation protein-like protein TERM 31 27215 - 27232 + G 70 -3.5 -5.02074 | AAGAAAAAAATGCAA TTTTGGA TTTT TCTAAAA TTTTTTCAAAGCTAA TERM 32 27473 - 27449 - g 72 -2.9 -5.42198 | overlap 27453 27468 TCCCAAAAAACAAAA CCATTCTTA ATAAAGA TGAGAATGG CATTCATATCACACT Cla_a024 26635 - 27504 + | hypothetical protein TERM 33 27756 - 27772 + G 83 -8.7 -4.14739 | opp_overlap 27756 27759, overlap 27759 GCTGGAATGGATAAA GGAGCTG TAA CAGCTTC TTTTAAAGTAAATAA TERM 34 27759 - 27769 + G 74 -6.8 -4.19746 | opp_overlap 27756 27759, overlap 27756 GGAATGGATAAAGGA GCTG TAA CAGC TTCTTTTAAAGTAAA Cla_a025 27588 - 28256 + | hypothetical protein TERM 35 28286 - 28258 - f 100 -14.1 -4.35646 | ATATCGAAAGATAAA TTTTACACCCTTA TTA CAAGGGTGTAAAA CAAATAAAGATAAAA TERM 36 29406 - 29382 - g 73 -8.7 -3.11103 | opp_overlap 29377 29377, overlap 29385 AAAAGAGTGATTTAA GCATTAAAAGC AAA GCTTTTAATGA CAAAAATATTTCCGC TERM 37 29403 - 29385 - g 71 -9 -2.75891 | opp_overlap 29377 29377, overlap 29382 AGAGTGATTTAAGCA TTAAAAGC AAA GCTTTTAA TGACAAAAATATTTC TERM 38 30089 - 30069 - g 76 -2.5 -5.5112 | overlap 30072 TTGAGCAACAAAAAA TGATTGAGC AAG GCACAATAA AAAAAGAAGATTTCT Cla_a026 28310 - 30340 + | DNA topoisomerase III TraE Cla_a027 30353 - 30763 + | single-stranded DNA binding protein TERM 39 32149 - 32129 - g 75 -9.1 -2.9006 | opp_overlap 32129 32131, overlap 32131 AAGCTATGGTAGATA CACTTGCAT TTA ATGCAAATG TATATCAAAGATTAA TERM 40 33900 - 33879 - g 71 -3.1 -5.28176 | overlap 33883 CTTAGCTACAAAAAA TTTAGTTTT AGAT AAAACTGAA GTTAAAGTTACAGGT TERM 41 34664 - 34642 - g 74 -7.9 -3.75897 | AATGTGGAAGCTAAA GCTTTTAAT CAAAT ATTAAAAGC TAGTGCTAAAATTAG Cla_a028 30763 - 35142 + | putative adhesin/invasin TERM 42 35162 - 35196 + T 73 -8.8 -2.82773 | opp_overlap 35156 35163, overlap 35156 35161 35159 CTAATGAATTTTTAA ATAGCCTATATAAAAT TTA ATTTTTTATAGGCTAA ATGTTTATTCACTTA TERM 43 35195 - 35163 - T 93 -12.3 -3.62478 | opp_overlap 35156 35162 35161 35159, overlap 35156 TAATGAATTTTTAAA TAGCCTATATAAAAT TTA ATTTTTTATAGGCTA AATGTTTATTCACTT Cla_a029 35627 - 35238 - | hypothetical protein Cla_a030 36192 - 35704 - | hypothetical protein TERM 44 36183 - 36211 + g 78 -10.6 -2.54732 | opp_overlap 36188, overlap 36182 36188 36208 CGGTTTCCCCTATAG TAAAATACAAGT CTGAA ACTTGTATTTTA GTTCCTAAATTTAAA TERM 45 36206 - 36188 - G 74 -6.8 -4.34402 | opp_overlap 36183 36182 36188 TCCCCTATAGTAAAA TACAAGTC TGA AACTTGTA TTTTAGTTCCTAAAT TERM 46 36188 - 36206 + g 74 -6.1 -4.45945 | opp_overlap 36188, overlap 36183 36182 TCCCCTATAGTAAAA TACAAGT CTGAA ACTTGTA TTTTAGTTCCTAAAT TERM 47 36456 - 36423 - H 70 -8.4 -2.72991 | overlap 36451 TTATAGCTTTAATCA CTCTTATCTTAGTC ATTAAA AACTAAGATAAGAA CTAATTTCTTAAAAA TERM 48 36867 - 36816 - H 75 -8.3 -3.41051 | opp_overlap 36818 36822, overlap 36825 36863 TTATCTTTATGATAA CTCTAATTACTCTTATCTTAGTC ATTAAA AACTAAGATAAGAGTAATTTGTT TTTTACAAGTGATTA TERM 49 36818 - 36865 + H 100 -14.6 -5.03715 | opp_overlap 36816 36825 36863, overlap 36822 ATCTTTATGATAACT CTAATTACTCTTATCTTAGT CATTAAAA ACTAAGATAAGAGTAATTTG TTTTTTACAAGTGAT TERM 50 36822 - 36861 + H 100 -14 -5.04249 | opp_overlap 36816 36825, overlap 36818 TTATGATAACTCTAA TTACTCTTATCTTAGT CATTAAAA ACTAAGATAAGAGTAA TTTGTTTTTTACAAG TERM 51 36858 - 36825 - H 88 -12 -2.76453 | opp_overlap 36822 36818, overlap 36816 TGATAACTCTAATTA CTCTTATCTTAGTC ATTAAA AACTAAGATAAGAG TAATTTGTTTTTTAC Cla_a031 36974 - 37609 + | site-specific recombinase/resolvase Cla_a032 37764 - 38405 + | putative DNA primase TraC TERM 52 38706 - 38694 - g 72 -6.3 -4.23007 | TATAGAATGTGAAAA TGCTT TTA AAGCA GATATAGGTAAATCA Cla_a033 38494 - 38802 + | hypothetical protein TERM 53 38817 - 38837 + T 83 -4 -5.95449 | opp_overlap 38818, overlap 38818 AATAGGAGTGAAAAA TGAGTAGT GTTTA GCTACTCG TTTTTTGTTTTATTT TERM 54 38964 - 38937 - T 79 -8.6 -3.70511 | opp_overlap 38937 38938 38941, overlap 38935 38938 TATCTAATATAAATA CTAACTAGAGAT TTTA ATCCCTAGTTAA TTCTTTATCAGAATT TERM 55 38963 - 38938 - T 79 -9.9 -2.81584 | opp_overlap 38937 38938 38941, overlap 38937 38935 ATCTAATATAAATAC TAACTAGAGAT TTTA ATCCCTAGTTA ATTCTTTATCAGAAT TERM 56 38965 - 38977 + T 70 -2 -5.55855 | opp_overlap 38935 38965 TTAATCCCTAGTTAA TTCT TTATC AGAA TTTTCTTTTTTTAGG Cla_a034 40185 - 38950 - | DNA primase TraC TERM 57 40263 - 40247 - R 79 -7.9 -3.87149 | TTGATGAAATTCAAA GGGCTTC CTA GTAGCCC ATCCCTACTTTTAAC Cla_a035 40933 - 40274 - | hypothetical protein Cla_a036 41405 - 40992 - | PIN domain protein TERM 58 41063 - 41073 + g 82 -5.4 -5.35224 | opp_overlap 41063 TATCCATAGTATAAA TTGC TGT GCAA TTTTCTTTTTCTGCG Cla_a037 42301 - 41402 - | hypothetical protein TERM 59 41823 - 41842 + g 78 -3 -5.54264 | gap 1, overlap 41828 TCAAAATCAAAAGTT TTAACGACA GTT TGTC-TTAA TTTTTTTAGATCTTT TERM 60 42397 - 42383 - H 88 -5.8 -5.36181 | opp_overlap 42383 42395 AAATAAAAAAACAAA TTGTAT CCC ATACAA TGAATTTTATTGATT TERM 61 42631 - 42657 + H 70 -8.2 -3.28864 | opp_overlap 42632 42638, overlap 42630 42632 42638 TTGCCAATAATGTAA ATCAAAAGTAAT ATT ATTACTTTTGAA CTTTTATAATAATAA TERM 62 42656 - 42632 - H 100 -11.7 -3.85389 | opp_overlap 42631 42630 42632 42638, overlap 42638 TGCCAATAATGTAAA TCAAAAGTAAT ATT ATTACTTTTGA ACTTTTATAATAATA TERM 63 42632 - 42656 + H 87 -11.7 -2.56836 | opp_overlap 42632 42638, overlap 42631 42630 42638 TGCCAATAATGTAAA TCAAAAGTAAT ATT ATTACTTTTGA ACTTTTATAATAATA TERM 64 43075 - 43063 - g 72 -6.3 -4.23007 | TATAGAATGTGAAAA TGCTT TTA AAGCA GATATAGGTAAATCA Cla_a038 42863 - 43171 + | hypothetical protein TERM 65 43186 - 43206 + T 83 -4 -5.95449 | opp_overlap 43187, overlap 43187 AATAGGAGTGAAAAA TGAGTAGT GTTTA GCTACTCG TTTTTTGTTTTATTT TERM 66 43333 - 43306 - T 79 -8.6 -3.70511 | opp_overlap 43306 43307 43310, overlap 43304 43307 TATCTAATATAAATA CTAACTAGAGAT TTTA ATCCCTAGTTAA TTCTTTATCAGAATT TERM 67 43332 - 43307 - T 79 -9.9 -2.81584 | opp_overlap 43306 43307 43310, overlap 43306 43304 ATCTAATATAAATAC TAACTAGAGAT TTTA ATCCCTAGTTA ATTCTTTATCAGAAT TERM 68 43334 - 43346 + T 70 -2 -5.55855 | opp_overlap 43304 43334 TTAATCCCTAGTTAA TTCT TTATC AGAA TTTTCTTTTTTTAGG Cla_a039 44392 - 43319 - | DNA primase TraC Cla_a040 45121 - 44411 - | hypothetical protein TERM 69 44497 - 44513 + g 71 -2.3 -5.41787 | opp_overlap 44474 44497 44498, overlap 44475 44503 GAAAAAATTCATCAA CTTTTTT AAA AAAATAG TTTTTATCTTTTTTC TERM 70 44716 - 44726 + g 72 -2.6 -5.43329 | opp_overlap 44716 TAAGCGGAGATAATA TTTT GTC AAAA TTTTCTTTTATTTTT TERM 71 44974 - 44962 - G 78 -6.3 -4.84363 | opp_overlap 44962 TTAAAGTATTAAAAA GAGAT TCA ATCTC TTTAGGATTTGATGT Cla_a041 45465 - 45193 - | hypothetical protein