TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.709121 %AT, 572304 nt, 3903 terms. Intergenic: 0.799547 %AT, H2T: 91357 nt, 1108 terms; T2T: 19298 nt, 536 terms; H2H: 29087 nt, 894 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|33519483|ref|NC_005061.1| Candidatus Blochmannia floridanus, complete genome (length 705557) gidA 1 - 1905 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1 2413 - 2424 + G 71 -3 -5.29742 | GTCTTTTTGGGTGTT GAAT ATAG ATTC TTTGTTTTTTTCTGT atpB 2294 - 3112 + | F0F1 ATP synthase subunit A atpE 3181 - 3420 + | F0F1 ATP synthase subunit C TERM 2 3695 - 3673 - g 74 -9.2 -2.84276 | opp_overlap 3662 3676, overlap 3670 ATTCGCAATGAAGCA TTAGCCTGTT TAA AACAGGCTCA TATAAAATCAGAAGA TERM 3 3676 - 3692 + G 82 -10.9 -2.63596 | opp_overlap 3673 3670, overlap 3662 CGCAATGAAGCATTA GCCTGTT TAA AACAGGC TCATATAAAATCAGA TERM 4 3915 - 3892 - g 72 -4 -5.02502 | opp_overlap 3892 3908, overlap 3893 3904 GAGAGTACAGAAAAA GTTATTGATA CATC TATCAATAAA ATTATTGATTATGAT atpF 3490 - 3975 + | F0F1 ATP synthase subunit B TERM 5 4417 - 4403 - g 75 -4.4 -5.25735 | CTAAAAAAGTAAAAA TTATAT GCA ATATAA ATAGAGATATAATTG atpH 3976 - 4521 + | ATP synthase delta subunit atpA 4543 - 6084 + | F0F1 ATP synthase subunit alpha atpG 6110 - 6976 + | F0F1 ATP synthase subunit gamma TERM 6 8289 - 8271 - g 71 -9 -2.78463 | ATTTTCTGGATCATA TGTATCTT TAG AAGATACA ATTGCAGGTTTTAAA atpD 7006 - 8400 + | F0F1 ATP synthase subunit beta atpC 8460 - 8876 + | ATP synthase epsilon subunit TERM 7 9543 - 9533 - g 74 -5.4 -4.96427 | opp_overlap 9533 GAATAATAAAAGAAA TCCA TTC TGGA ATTTTTATTTCTGTT glmU 9010 - 10407 + | UDP-N-acetylglucosamine pyrophosphorylase trmE 11961 - 10537 - | tRNA modification GTPase TrmE yidC 13740 - 12064 - | putative preprotein translocase subunit YidC TERM 8 12355 - 12343 - G 72 -6.3 -4.27584 | opp_overlap 12343 ATCTTTAATCCAAAA TGCAA ATT TTGCA TGTCTCAATTCTACC yidD 14000 - 13776 - | hypothetical protein TERM 9 13983 - 14002 + gr 73 -3.6 -5.2166 | opp_overlap 13983, overlap 13986 GATTTTTGCTGATAA TTTTGGTA GTGA TACCATAA TTTTTTCAGTTCTTC rnpA 14326 - 13964 - | RNase P, protein component rpmH 14514 - 14374 - | 50s ribosomal protein l34 TERM 10 15235 - 15225 - g 70 -4 -4.92363 | opp_overlap 15225 AAAGACTGAGAAAAA TACT ATA AGTA TGGTTTCAACTGATG dnaN 14731 - 15834 + | DNA polymerase III beta-subunit TERM 11 16644 - 16634 - g 74 -5.4 -5.0065 | opp_overlap 16639, overlap 16629 TATTTACAAATAAAA CTGA GTT TCAG TATGAAATTTTGGCA TERM 12 17424 - 17448 + G 93 -11.7 -3.12351 | opp_overlap 17422 TCGTAAAAATCAGGC TATTTTACCTT TAA AAGGTAAAATA TTAAATGTAGAAAAA TERM 13 18236 - 18210 - g 80 -9 -3.80841 | ATTATTATTATCAAA TCATTCTTATAT ACA ATATAAAAATGA TCGTAAAAAAATAAA gyrB 16096 - 18516 + | DNA gyrase subunit B ibpA 18765 - 19175 + | heat shock protein A unknown 20356 - 19346 - | transmembrane protein TERM 14 21168 - 21156 - g 70 -6.3 -4.1585 | GGATAATTGGGAAAA TCCTA CAT TAGGA GCGTATGGGTTAGGT glyQ 20794 - 21699 + | glycyl-tRNA synthetase subunit alpha TERM 15 21724 - 21737 + F 75 -3.9 -5.52384 | opp_overlap 21724 TTGGATAGTATGATA TATGT TAAA ACATA TTTTTTTGGTAGCAA TERM 16 22099 - 22117 + G 81 -10.4 -3.12402 | overlap 22095 22102 GTTTGTTCGTCCTGT CAATACTG TGA CAGTATTG TTAGATACTAATTTG glyS 21725 - 23710 + | glycine-tRNA synthetase, beta subunit TERM 17 23729 - 23712 - T 71 -7.1 -3.90112 | opp_overlap 23712 TTCTGTGCAATTAAA CATATGA ATAC TCATATG TTTAATTGCACAGAA TERM 18 23712 - 23729 + T 71 -7.1 -3.90112 | opp_overlap 23712 TTCTGTGCAATTAAA CATATGA ATAC TCATATG TTTAATTGCACAGAA sodA 24389 - 23766 - | manganese superoxide dismutase TERM 19 25750 - 25768 + G 74 -9 -3.31416 | opp_overlap 25744, overlap 25745 AAAAATGTATCTTTT TTCTGTTT CAG AAACAGAA TTAAGTGTTTATTTT TERM 20 26401 - 26421 + G 83 -9.9 -3.64822 | opp_overlap 26406 26419 TGGGTTATTTGATTA TCATATTCA TCA TGAATATGA TTTAAATCAAAAAAT TERM 21 26452 - 26436 - g 71 -2.3 -5.38497 | opp_overlap 26429 26436, overlap 26429 ATTTAAATCAAAAAA TACCA GTATTTT TGGTA TTTAATAAAATAATA prlC 24707 - 26794 + | oligopeptidase A pitA 28562 - 26943 - | putative low-affinity inorganic phosphate transporter TERM 22 27009 - 26987 - G 85 -3.5 -5.72622 | TTGATAAATAAAAAA TGCTACT TAATATAAT AGTAGCA GGGACAGTTAAAGTC TERM 23 27564 - 27591 + g 80 -8.6 -3.78312 | opp_overlap 27565 27570, overlap 27565 27567 TATTTGTTCTGAAGA ATACAATTGTGA TATT TCACAATTGTAA TTTGATGAATGATTT TERM 24 27565 - 27590 + g 89 -12.1 -2.86264 | opp_overlap 27565 27570, overlap 27564 27567 ATTTGTTCTGAAGAA TACAATTGTGA TATT TCACAATTGTA ATTTGATGAATGATT TERM 25 27590 - 27565 - G 95 -12.1 -3.61517 | opp_overlap 27565 27564 27567, overlap 27570 ATTTGTTCTGAAGAA TACAATTGTGA TATT TCACAATTGTA ATTTGATGAATGATT TERM 26 27567 - 27588 + g 79 -10.3 -2.97667 | opp_overlap 27565 27570, overlap 27565 27564 TTGTTCTGAAGAATA CAATTGTGA TATT TCACAATTG TAATTTGATGAATGA TERM 27 28353 - 28337 - G 79 -8.1 -3.91541 | GGATTAAATGAATAA TAGTGTA TGT TACACTA ACTCCTCCTAATATT TERM 28 29531 - 29512 - g 80 -6.6 -4.78933 | opp_overlap 29512 GGAAAATAGATAAAA TTGTAATA GGAA TATTACAA TTATTGACAGTATTT TERM 29 29555 - 29588 + G 82 -6.3 -5.28281 | gap 1, opp_overlap 29560 AGTATTTATACTTTA TATAATAGG-AATTGT AGA ACAATTACCTATAATA TTTTATTTATTTTCT ubiA 28887 - 29741 + | 4-hydroxybenzoate octaprenyltransferase zur 30382 - 29903 - | zinc uptake regulation protein TERM 30 31465 - 31479 + G 83 -8.6 -4.11404 | opp_overlap 31464 31461 31460 31465 31467 AGAGCAAATAGTAAT GAGGAT GTT ATCCTC TTTATCTCGTGTAGA TERM 31 31479 - 31465 - g 70 -8.6 -2.68881 | opp_overlap 31465, overlap 31464 31461 31460 31467 AGAGCAAATAGTAAT GAGGAT GTT ATCCTC TTTATCTCGTGTAGA dnaB 30665 - 32065 + | replicative DNA helicase ssb 32202 - 32678 + | single-strand DNA-binding protein yjcE 33060 - 34706 + | putative sodium/hydrogen exchanger family protein TERM 32 34911 - 34942 + F 71 -2.4 -5.83211 | gap 1 ATAATATTTATGTTA CTCAATGTGA-ATGA AAA TGATATCGCATTGGG TTTTTTATTTTACTG TERM 33 35449 - 35472 + G 77 -7.6 -4.17296 | opp_overlap 35443, overlap 35445 35451 GATATGGAATTGATA TGTCTGTTTT GTCT AAAACAGATA TTTCTATGTATGAGC TERM 34 35451 - 35470 + G 72 -8 -3.68183 | opp_overlap 35443, overlap 35449 35445 TATGGAATTGATATG TCTGTTTT GTCT AAAACAGA TATTTCTATGTATGA TERM 35 36167 - 36181 + G 76 -6.4 -4.57533 | opp_overlap 36156, overlap 36160 36151 TAAAGGTATCGCTGG GGTACC AGG GGTATC TTTTGTAGTGTTATT gltP 35103 - 36392 + | glutamate/aspartate:proton symporter TERM 36 36470 - 36419 - T 100 -29.4 -3.09635 | opp_overlap 36419, overlap 36421 36423 36425 36449 ATTTTTATTATTGAA TACATATTCACTGAATACTCAGTA TTAA TACTGAGTATTCAGTGAATATGTA TTTTGTATGGTGATT TERM 37 36419 - 36470 + T 100 -29.4 -4.59027 | opp_overlap 36419 36421 36423 36425 36449 ATTTTTATTATTGAA TACATATTCACTGAATACTCAGTA TTAA TACTGAGTATTCAGTGAATATGTA TTTTGTATGGTGATT TERM 38 36468 - 36421 - T 100 -27.6 -3.10796 | opp_overlap 36419, overlap 36419 36423 36425 36449 TTTTATTATTGAATA CATATTCACTGAATACTCAGTA TTAA TACTGAGTATTCAGTGAATATG TATTTTGTATGGTGA TERM 39 36466 - 36423 - T 100 -24.4 -3.11316 | opp_overlap 36419, overlap 36421 36419 36425 36449 TTATTATTGAATACA TATTCACTGAATACTCAGTA TTAA TACTGAGTATTCAGTGAATA TGTATTTTGTATGGT TERM 40 36464 - 36425 - T 100 -22.6 -3.11339 | opp_overlap 36419, overlap 36423 36421 36419 36449 ATTATTGAATACATA TTCACTGAATACTCAGTA TTAA TACTGAGTATTCAGTGAA TATGTATTTTGTATG yjgF 36994 - 36578 - | putative translation initiation inhibitor TERM 41 36882 - 36868 - G 71 -8.6 -2.80492 | opp_overlap 36861 36868, overlap 36865 TATTATTAGGAATCA TTCCTG TAT CAGGAA TTATAGGAATTTGCC TERM 42 36868 - 36882 + g 74 -8.6 -3.3506 | opp_overlap 36868 36865, overlap 36861 TATTATTAGGAATCA TTCCTG TAT CAGGAA TTATAGGAATTTGCC argI 38105 - 37062 - | ornithine carbamoyltransferase subunit I valS 41260 - 38360 - | valyl-tRNA synthetase TERM 43 38465 - 38484 + g 74 -2.2 -5.55769 | opp_overlap 38466, overlap 38466 38481 ATGTTGTAGATTAAG AGAATAAT TAGT ATTATTCA TTTTTTGTTCTAAAA TERM 44 38481 - 38505 + g 73 -5.9 -4.67256 | opp_overlap 38466, overlap 38466 38465 GAATAATTAGTATTA TTCATTTTTTG TTC TAAAAGATGAA TTTTATAATTTATTA TERM 45 40950 - 40964 + g 80 -2.2 -5.80817 | overlap 40951 TCTTTTATAGAATTT TTTTTA TTA TAAAAG TTTTTTTCTATTAAA holC 41718 - 41257 - | DNA polymerase III, chi subunit TERM 46 41762 - 41785 + r 70 -7 -4.1023 | opp_overlap 41762 41765 41768, overlap 41760 41765 ATATATGTTTATATA TAATTATAAT TATA ATTATAATTA TTATTATTTGAAGTT pepA 43352 - 41838 - | cytosol aminopeptidase TERM 47 41910 - 41865 - G 100 -26.7 -4.91873 | opp_overlap 41865 TATATTAATTAAAAA TTGTGTTAAAAGTTCTACAGG GCGA CCTGTAGAACTTTTAACACAA TTTTTAGAGATCCAA TERM 48 41865 - 41910 + g 100 -26.7 -4.59773 | opp_overlap 41865 TATATTAATTAAAAA TTGTGTTAAAAGTTCTACAGG GCGA CCTGTAGAACTTTTAACACAA TTTTTAGAGATCCAA yjgP 43484 - 44596 + | putative inner membrane protein TERM 49 44721 - 44751 + G 95 -7.1 -6.17292 | opp_overlap 44720 GATGAATTACGTAAT TTTCAAAAACAAA CTTAT TCTGTTTTTGAAA TTTTTTTTTGCATTT yjgQ 44598 - 45680 + | putative inner membrane protein yidZ 46615 - 45692 - | LysR family transcriptional regulator TERM 50 46473 - 46504 + g 74 -7.6 -3.78775 | CGTACTAAAATTTGA TCATTGAATAAAAT ACGT ATTTTGTTTAATGA TTTGCTAATAGCAGG TERM 51 47141 - 47162 + H 72 -3.1 -5.69976 | ATTTCTGGAATTGTT CGAATATTA TTAG TAATATTAG TTTTATTTTTTTTAT TERM 52 47236 - 47216 - H 76 -8.5 -3.62775 | opp_overlap 47215 47213 47212 ATTATGTGTTAATAA TCATTATTA TGA TAATAATGA GTAATTTAGTAATTG unknown 47224 - 47880 + | putative manganese transport system ATP-binding protein TERM 53 48086 - 48119 + G 74 -8.3 -3.64984 | overlap 48068 48066 48085 GGAGATGCATTATCT CATGCTATATTACCA GGTG TGGTAATAGGGTATG TATTTTCAGGAGTAT TERM 54 48761 - 48772 + G 70 -4.4 -4.85822 | opp_overlap 48761 TTGTTTGGAAAAAAT CAAG GAGT CTTG TTTTCTGTTTGTCGT unknown 47930 - 48793 + | putative manganese transport system permease protein yhbG 49828 - 49103 - | ABC transporter ATP-binding protein TERM 55 49713 - 49695 - G 79 -6 -5.03405 | AATATCATATAAAAA GTTGTGGT TTT ACCAGAAC CATTAGGACCTAATA yhbN 50347 - 49841 - | hypothetical protein TERM 56 50018 - 50045 + g 100 -14.4 -5.32699 | opp_overlap 50018 AATGCTATCAAAAAA TATAACTTCTGC ACTA GCAGAAGTTATA TTTTTTGATGTTTGA TERM 57 50045 - 50018 - G 100 -14.4 -5.16237 | opp_overlap 50018 AATGCTATCAAAAAA TATAACTTCTGC ACTA GCAGAAGTTATA TTTTTTGATGTTTGA yrbK 50936 - 50328 - | hypothetical protein TERM 58 50805 - 50781 - G 78 -10.3 -2.82635 | overlap 50783 ACCTTGATGAGTATA TATTTCATTAT CCA ATAATGAAATA TAGGGGTGCATAGTT TERM 59 50952 - 50914 - G 87 -11.4 -3.04263 | opp_overlap 50896 50913 50922, overlap 50919 50922 50927 ATTGTATTGGGAAGA GTTAACAATACAATAAAT ATC ATTTATCGTATTGTTAAA ATTAAATAATTTAAA TERM 60 50947 - 50919 - G 91 -11.3 -3.18728 | opp_overlap 50896 50913 50922, overlap 50914 50922 50927 ATTGGGAAGAGTTAA CAATACAATAAAT ATC ATTTATCGTATTG TTAAAATTAAATAAT TERM 61 50944 - 50922 - G 71 -7.2 -3.7347 | opp_overlap 50896 50922 50913, overlap 50919 50914 50927 GGGAAGAGTTAACAA TACAATAAAT ATC ATTTATCGTA TTGTTAAAATTAAAT yrbA 51122 - 51376 + | hypothetical protein TERM 62 52670 - 52657 - g 72 -5.3 -4.71401 | AAGAAAATTACAAAA TATGG GAGC CCATA TTCAAAGAATTACAG murA 51431 - 52693 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 63 52680 - 52735 + T 100 -19.8 -3.99315 | gap 1, opp_overlap 52680 52691, overlap 52691 52694 CCCATATTCAAAGAA TTACAGACAAATAATTATAT-TACTAA TTA TTAGTGTATATAATTATTTGTCTGTAA TTCTTTGAATATGGT TERM 64 52735 - 52680 - T 100 -17.6 -3.98913 | gap 1, opp_overlap 52680 52691 52694, overlap 52691 CCCATATTCAAAGAA TTACAGACAAATAATTATAT-TACTAA TTA TTAGTGTATATAATTATTTGTCTGTAA TTCTTTGAATATGGT degQ 54183 - 52798 - | serine protease TERM 65 53969 - 53951 - G 74 -3.2 -5.40072 | overlap 53954 TCTGGTCCAAAAAAA TATCTAAA TTC TTTAGGTA AAGTAAGTCTTTTGG TERM 66 54239 - 54261 + r 80 -8.6 -3.99324 | opp_overlap 54241 54245 54256 TGGTACTTTATATAG TATCAATGAA AAA TTCATTGGTA TTTATAATACTAACA yhcB 54803 - 54393 - | hypothetical protein rplM 55306 - 55725 + | 50S ribosomal protein L13 rpsI 55796 - 56188 + | 30S ribosomal subunit protein S9 yraP 56943 - 56365 - | lipoprotein TERM 67 57204 - 57222 + H 73 -7.6 -4.02979 | opp_overlap 57202 57204, overlap 57186 ATTTTAGATAAAATA CATTATAT ATT ATATAATG TTTGGTTAATATTTT TERM 68 57222 - 57204 - H 71 -7.6 -3.88029 | opp_overlap 57186 57204, overlap 57202 ATTTTAGATAAAATA CATTATAT ATT ATATAATG TTTGGTTAATATTTT TERM 69 57630 - 57645 + G 77 -9 -3.62644 | ATTACCTGGGCCTTG TGCTGC TATA GCAGCA TTATGTAGTTCTGGA TERM 70 58106 - 58089 - g 88 -4.3 -5.81032 | opp_overlap 58089, overlap 58077 TAATTTTAAAAAAAA TATTTTT TACA AAAAATA TTTGAATGAAAAAAT yraL 57241 - 58146 + | hypothetical protein TERM 71 59020 - 59033 + G 85 -2.4 -6.11644 | opp_overlap 59020 TTATTTGTAGAGAAT GCTA TGCTTT TAGC TTTTTTTTTACCTGG yqjA 58900 - 59466 + | hypothetical protein rpoD 61550 - 59697 - | RNA polymerase sigma-70 factor TERM 72 60866 - 60881 + g 76 -2.6 -5.55664 | TTTTTTCGTATTGTT TTTGCA AATC TGTAAA TTTTTTTCGTGCTAA dnaG 63476 - 61710 - | DNA primase TERM 73 63058 - 63077 + g 78 -3 -5.63645 | CCTCTGTTTTTTAGA TATTTATA GGCA TATGAATA TTTTTTGTGTTTTAG rpsU 63837 - 63622 - | 30S ribosomal subunit protein S21 gcp 64010 - 65071 + | glycoprotease TERM 74 65110 - 65088 - T 83 -10.8 -3.55304 | opp_overlap 65088 65093, overlap 65084 65093 ATAGCTAAGAATGAA CATAATACAT GTT ATGTATTATG TTGTTAAGATTGTAT TERM 75 65088 - 65110 + T 83 -10.8 -3.70081 | opp_overlap 65088 65084 65093, overlap 65093 ATAGCTAAGAATGAA CATAATACAT GTT ATGTATTATG TTGTTAAGATTGTAT ygiH 65733 - 65143 - | hypothetical protein folB 65861 - 66229 + | dihydroneopterin aldolase, also has dihydroneopterin triphosphate 2'-epimerase activity cca 68011 - 66776 - | tRNA CCA-pyrophosphorylase TERM 76 66846 - 66887 + g 72 -8.3 -3.36188 | gap 1, opp_overlap 66829 66828 66853 66859, overlap 66829 66855 CTAGAATATAATTCT TGACTAATATTAATTCCGGA GAA TCCAGAATTAATAAT-GTCA TTGGCTTTAATTTGT TERM 77 66881 - 66853 - G 100 -12.7 -3.15758 | opp_overlap 66846 66855, overlap 66859 ATAATTCTTGACTAA TATTAATTCCGGA GAA TCCAGAATTAATA ATGTCATTGGCTTTA TERM 78 66855 - 66879 + g 70 -8.7 -2.70708 | opp_overlap 66853 66859, overlap 66846 AATTCTTGACTAATA TTAATTCCGGA GAA TCCAGAATTAA TAATGTCATTGGCTT rfaE 68185 - 69624 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase yqiC 70039 - 69770 - | hypothetical protein ribB 70261 - 70902 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 79 71687 - 71710 + G 76 -9 -3.53125 | overlap 71690 GCGCTTTTTATGCTG CAATTTCTGC TAAG GTAGAAATTG TTCCTATTTGTGTGT plsC 71182 - 71916 + | 1-acyl-glycerol-3-phosphate acyltransferase TERM 80 71972 - 72001 + T 72 -8.9 -3.02202 | opp_overlap 71975 71978 71988, overlap 71971 71975 71978 GCTTGGTTATATGAC TAATAATATCATT AAAT AATGATATTATTG ATTTATATAAAAATG TERM 81 71975 - 71998 + T 76 -8.4 -3.65294 | opp_overlap 71975 71978 71988, overlap 71972 71971 71978 TGGTTATATGACTAA TAATATCATT AAAT AATGATATTA TTGATTTATATAAAA TERM 82 71998 - 71975 - T 73 -8.4 -3.24747 | opp_overlap 71975 71972 71971 71978, overlap 71978 71988 TGGTTATATGACTAA TAATATCATT AAAT AATGATATTA TTGATTTATATAAAA metC 73197 - 72022 - | beta-cystathionase TERM 83 72453 - 72479 + g 77 -8.8 -3.5774 | overlap 72450 GCAGTCCTCGAGCTG CTATGTATGCAG TAT CTGCATCTATAG TTTGGCCCATTAAGT TERM 84 72800 - 72782 - G 71 -7.6 -3.39784 | opp_overlap 72782, overlap 72780 TTATGTTGAATAAGA TTAGTAAT ATT ATTACTAA TTGATGAATGAAACC TERM 85 73301 - 73289 - R 72 -7.7 -3.37727 | TAATATATATACTAA TCTGG TGC CCAGA CTCGGAATCGAACCA TERM 86 73437 - 73415 - R 95 -10.8 -4.76191 | ATACACTAAAATAAA TCAGTAATAA CAC TTATTACTGA TGATAACATATATGG cutA 74061 - 73702 - | periplasmic divalent cation tolerance protein CutA groES 74437 - 74730 + | co-chaperonin GroES groEL 74787 - 76430 + | chaperonin GroEL TERM 87 76567 - 76509 - f 100 -31.1 -2.88249 | opp_overlap 76514 76561, overlap 76514 TATATGGGTTATATA CAAAACAACAGGACATAATATACATTT CAAAT AAATGTATATTATGTCCTGTTGTTTTG TAACATTTCTATGTT TERM 88 76562 - 76514 - f 100 -25.2 -4.60797 | opp_overlap 76514 76561, overlap 76509 GGGTTATATACAAAA CAACAGGACATAATATACATTT CAAAT AAATGTATATTATGTCCTGTTG TTTTGTAACATTTCT TERM 89 76514 - 76562 + F 100 -25.2 -4.45577 | opp_overlap 76514 76509, overlap 76561 GGGTTATATACAAAA CAACAGGACATAATATACATTT CAAAT AAATGTATATTATGTCCTGTTG TTTTGTAACATTTCT efp 76578 - 77141 + | elongation factor P (EF-P) yjeP 80439 - 77182 - | hypothetical protein TERM 90 77690 - 77703 + g 70 -5.3 -4.62336 | ATAGTTATTGTGTCC CCAAT ACGA ATTGG TTTTTCGAATAGAAT TERM 91 77843 - 77833 - G 71 -6.8 -3.90298 | overlap 77834 TCCAATTAAAGATAA GCCT ATT AGGC TGCCTAATAACATGA TERM 92 77947 - 78004 + g 100 -15.3 -3.8647 | opp_overlap 77951, overlap 77945 77944 77948 77951 TTCTAAAAAGGATGG TAAATTTCTTACCGTTATTGTAGTAAT GATT ATCACTACAATAACGGTAAGAAATGCG TTTAATGTGATAGGT TERM 93 77948 - 78003 + g 100 -16.6 -2.914 | opp_overlap 77951, overlap 77945 77944 77947 77951 TCTAAAAAGGATGGT AAATTTCTTACCGTTATTGTAGTAAT GATT ATCACTACAATAACGGTAAGAAATGC GTTTAATGTGATAGG TERM 94 78000 - 77951 - G 100 -24.9 -3.67026 | opp_overlap 77945 77944 77948 77947 77951 AAAAAGGATGGTAAA TTTCTTACCGTTATTGTAGTAAT GATT ATCACTACAATAACGGTAAGAAA TGCGTTTAATGTGAT TERM 95 77951 - 78000 + g 100 -22.7 -2.69869 | opp_overlap 77951, overlap 77945 77944 77948 77947 AAAAAGGATGGTAAA TTTCTTACCGTTATTGTAGTAAT GATT ATCACTACAATAACGGTAAGAAA TGCGTTTAATGTGAT TERM 96 79073 - 79094 + g 81 -2.5 -5.66684 | gap 1, opp_overlap 79075 79078, overlap 79066 79075 79078 AAAGATGTTATTATA CA-TAATATT GTT AATATTAATG TTTTTTTATGAGTTA TERM 97 79571 - 79587 + g 78 -6.6 -4.59089 | TGAGAACGTAATGTT TCTCCA AGTGC TGGAGA TTTATTTATCCATTG TERM 98 80301 - 80313 + g 77 -4.9 -5.1764 | GTGTTGGTTTTTTTA TTACA TGT TGTAA TTTTTGTATTGTGTG psd 81411 - 80515 - | phosphatidylserine decarboxylase proenzyme TERM 99 81986 - 81972 - g 72 -8.6 -3.02745 | overlap 81969 TTGATTTAGAAATGA CTGGAT TAA ATCCAG AAAGGGATCGAATTT orn 81932 - 82474 + | oligoribonuclease TERM 100 83295 - 83283 - g 70 -6.3 -4.07133 | overlap 83265 TATTTTGATAAACAA TCAAC GTT GTTGA TAGAATGGCCGAAAA yjeE 82974 - 83477 + | putative nucleotide-binding protein TERM 101 84163 - 84148 - g 95 -6.2 -6.17292 | opp_overlap 84146 84148 AAACTTAAAAAAAAA TTGGAT TCTG ATCCAA TATTTAGAACTATTA TERM 102 84549 - 84564 + G 72 -7.6 -3.6707 | opp_overlap 84549 84548 TTTACATAAAAATAT TCCAGA ATGT TCTGGA TTTGGGGTGTTACGT amiB 83491 - 84750 + | N-acetylmuramoyl-L-alanine amidase miaA 84768 - 85739 + | tRNA delta-2-isopentenylpyrophosphate (IPP) transferase hflX 86066 - 87184 + | HflX protein, putative GTP-binding protein TERM 103 87637 - 87621 - g 82 -5.2 -5.40072 | opp_overlap 87621 CTTTTTTTAAAAAAA CACAAT TATTT ATTGTG TTCAGTATATTAATT hflK 87413 - 88735 + | HflK protein TERM 104 89330 - 89296 - g 74 -8.1 -3.56921 | opp_overlap 89300 89310, overlap 89294 89297 CTCAAGATAATAAGA TCAATCAACAAAATC GAAAT AATTTTGTTGATTGC ATAAATCCAAACAGT TERM 105 89329 - 89297 - g 85 -11.6 -2.73429 | opp_overlap 89300 89310, overlap 89296 89294 TCAAGATAATAAGAT CAATCAACAAAATC GAAAT AATTTTGTTGATTG CATAAATCCAAACAG hflC 88740 - 89765 + | FtsH protease regulator HflC TERM 106 89794 - 89767 - f 71 -7.2 -3.86202 | opp_overlap 89769, overlap 89769 TGTTAGGACATTAAA TATGTTCAATAT TTTT ATATTGAACATT TATACAAGGAGAGAA TERM 107 89769 - 89792 + F 83 -9.8 -3.85698 | opp_overlap 89767 89769 TTAGGACATTAAATA TGTTCAATAT TTTT ATATTGAACA TTTATACAAGGAGAG TERM 108 89792 - 89769 - f 80 -9.8 -3.51778 | opp_overlap 89769, overlap 89767 TTAGGACATTAAATA TGTTCAATAT TTTT ATATTGAACA TTTATACAAGGAGAG TERM 109 90718 - 90740 + G 73 -9.2 -2.59431 | overlap 90720 GCGTATTCTACTCGT GTTGGAAACG GTC CATTTCCAAC TGAATTATCAGGAGA purA 89881 - 91197 + | adenylosuccinate synthetase yjfH 91405 - 92169 + | tRNA/rRNA methyltransferase rpsF 92399 - 92761 + | 30S ribosomal protein S6 TERM 110 93016 - 93035 + G 100 -10.8 -5.4111 | CAGCGTCAGTTGGCT CGAGCTAT TAAA ATAGCTCG TTTTTTGTCATTGTT rpsR 92839 - 93075 + | 30S ribosomal protein S18 rplI 93152 - 93637 + | 50S ribosomal protein L9 cysQ 93801 - 94589 + | cysQ protein TERM 111 94811 - 94821 + F 81 -2.6 -6.35605 | overlap 94806 ATAAAGGGATTTTTA TAAT AAA ATTA TTTTTTTTTATATTA TERM 112 98558 - 98576 + G 72 -7.6 -3.55071 | opp_overlap 98558 AATATCATTGGAAAA TTTGATTT GGG AAATCAAA TTTGGAACGGTATAG TERM 113 98576 - 98558 - g 77 -7.6 -4.16681 | opp_overlap 98558 AATATCATTGGAAAA TTTGATTT GGG AAATCAAA TTTGGAACGGTATAG TERM 114 98737 - 98747 + G 72 -2.6 -5.40474 | overlap 98737 TTCTGTTTCTATTGA TTTT CAA AAAA TTTTTTTAGAAAAAT TERM 115 98814 - 98783 - g 70 -9 -2.674 | opp_overlap 98774 98788, overlap 98774 98788 GCAATATTTAAAGAT TTAAATTTCATATC TAAA GATATGAAATTTAT TGAAAAAATAATGAT TERM 116 98788 - 98809 + G 83 -8.9 -4.1552 | opp_overlap 98783 98788 ATTTAAAGATTTAAA TTTCATATC TAAA GATATGAAA TTTATTGAAAAAATA TERM 117 98809 - 98788 - g 80 -8.9 -3.81539 | opp_overlap 98788, overlap 98783 ATTTAAAGATTTAAA TTTCATATC TAAA GATATGAAA TTTATTGAAAAAATA TERM 118 99594 - 99608 + G 70 -5.8 -4.22883 | GAAATATTATGGGAG TTTCTT CTG AAGAAA TTGTTTTGAATGATA ytfN 96536 - 100396 + | hypothetical protein ppa 101022 - 100483 - | inorganic pyrophosphatase ispB 102159 - 101185 - | octaprenyl-diphosphate synthase TERM 119 102456 - 102438 - g 74 -7.5 -3.89212 | TATTTATATAGGAAA TCCGTTT ATTCA AAACGGA AAAATTATAGCAGAT rplU 102286 - 102669 + | 50S ribosomal protein L21 rpmA 102659 - 102916 + | 50S ribosomal protein L27 yhbZ 103318 - 104235 + | GTP-binding protein greA 104321 - 104809 + | transcription elongation factor, cleaves 3' nucleotide of paused mRNA ftsJ 105196 - 105816 + | cell division protein 23S rRNA methyltransferase FtsJ TERM 120 107177 - 107211 + G 91 -5.2 -5.81412 | gap 1, opp_overlap 107180, overlap 107180 CTGTGCATAAGGTAA CGATTATTCCTAGAG GTCGTG CTTTAGGGATAA-CG TTTTTTTTACCTGAA TERM 121 107699 - 107662 - g 72 -5.2 -4.73864 | opp_overlap 107671, overlap 107651 107666 TTAATGAATAGAAAA TCAATC-CAATCTTTATC GTAT GATAAAGATTGTGA-CGA AATAAATGATGATGA TERM 122 107696 - 107666 - g 84 -9.3 -3.82442 | gap 1, opp_overlap 107671, overlap 107651 107662 TGAATAGAAAATCAA TC-CAATCTTTATC GTAT GATAAAGATTGTGA CGAAATAAATGATGA ftsH 105868 - 107802 + | cell division protein FtsH folP 107925 - 108770 + | dihydropteroate synthase TERM 123 108958 - 108974 + G 71 -7.3 -3.72984 | opp_overlap 108958 108959 108961, overlap 108959 108967 108967 GGATATATGTTAGAA TCAGCTT TAG AAGCTGG TTTAGCTGCTTCTGG TERM 124 108959 - 108973 + G 71 -8.6 -2.83309 | opp_overlap 108958 108959 108961, overlap 108958 108967 108967 GATATATGTTAGAAT CAGCTT TAG AAGCTG GTTTAGCTGCTTCTG TERM 125 108973 - 108959 - g 70 -8.6 -2.61239 | opp_overlap 108959 108958 108967 108967, overlap 108958 108961 GATATATGTTAGAAT CAGCTT TAG AAGCTG GTTTAGCTGCTTCTG mrsA 108772 - 110130 + | PGM/PMM-family protein TERM 126 110542 - 110520 - f 82 -7.8 -4.63592 | TTCTAATAAAAATAA GGAACCTAAA TAA TTTAGGTTAC GATGACTATCGTTCT nusA 111377 - 112882 + | transcription elongation factor NusA TERM 127 113062 - 113050 - g 72 -4.9 -4.88067 | opp_overlap 113060 ACTCAGTCAGAAAAA GAAAT TTT ATTTC GTCATATGAATGTTA TERM 128 113670 - 113643 - g 73 -5.6 -4.58685 | AAATGTGCGTAAAAA TCTTACTGATCG GTTA CGTTCAACAAGA ACCCGAAATTTAAGT infB 112933 - 115626 + | translation initiation factor IF-2 rbfA 115697 - 116050 + | ribosome-binding factor A (P15B protein) truB 116087 - 116854 + | tRNA pseudouridine 5S synthase rpsO 116984 - 117256 + | 30S ribosomal subunit protein S15 pnp 117421 - 119514 + | polynucleotide phosphorylase/polyadenylase TERM 129 120998 - 120969 - g 76 -9.6 -2.85109 | opp_overlap 120968 120973, overlap 120964 120973 AGATATAGAACAGTA TCAATCTTTATT AGGGAA AATAAAGATTGA CTTGGATATAACTAT deaD 119755 - 121218 + | cold-shock DEAD-box protein A, inducible ATP-independent RNA helicase holD 121590 - 121997 + | DNA polymerase III, psi subunit TERM 130 122192 - 122211 + F 79 -6.6 -5.07652 | opp_overlap 122192 122191 TTTATGTATGATAAT TAAAATCA GGTT TGATTTTA TTTTATTTTGAACAA TERM 131 122265 - 122283 + F 73 -7.6 -4.09627 | overlap 122275 AATAGTAATATTACT TTGATTAT GAT ATAATCAA TTATATTTTGTGTTT TERM 132 122423 - 122365 - f 100 -14.6 -3.92276 | gap 3, opp_overlap 122367 122368, overlap 122351 122352 122367 AGTATATATAAAATA TACAGTGATCTGAATCGATATGTAATGAA AATT TTCATTACATATCGATTCAGATCACT--- GTATATTTAGGAGAT TERM 133 122424 - 122367 - f 100 -34.9 -3.53768 | opp_overlap 122367 122368, overlap 122352 122365 TATATATAAAATATA CAGTGATCTGAATCGATATGTAATGAA AATT TTCATTACATATCGATTCAGATCACTG TATATTTAGGAGATA TERM 134 122367 - 122424 + F 100 -34.9 -3.24708 | opp_overlap 122352 122365 122367, overlap 122368 TATATATAAAATATA CAGTGATCTGAATCGATATGTAATGAA AATT TTCATTACATATCGATTCAGATCACTG TATATTTAGGAGATA TERM 135 122368 - 122426 + F 100 -14.6 -3.35597 | gap 3, opp_overlap 122365 122367, overlap 122367 ATATATAAAATATAC ---AGTGATCTGAATCGATATGTAATGAA AATT TTCATTACATATCGATTCAGATCACTGTA TATTTAGGAGATAAA TERM 136 122538 - 122524 - g 71 -2.1 -5.41143 | TATTCTTGAAAAAAA TGCTC AGAAA GAACA AATAGCAGTAGTATT thrA 122444 - 124900 + | bifunctional aspartokinase I/homeserine dehydrogenase I thrB 124937 - 125872 + | homoserine kinase thrC 125876 - 127207 + | threonine synthase dnaK 127463 - 129394 + | DnaK protein (heat shock protein 70) TERM 137 129406 - 129392 - f 84 -4.4 -6.07374 | ATAAAAAATAAAAAA TAATAA TTT TTATTA TGAGAAGATATAGGT dnaJ 129526 - 130659 + | DnaJ protein TERM 138 130710 - 130652 - T 100 -24.7 -3.09516 | gap 1, opp_overlap 130653 130660 130664, overlap 130660 130664 TTTTTGATGATTTAA CTCGATAACAAATTAACAACATAGAAAA TTAA TTTTCTATGTTGTTAATTTGTTATCGA- GTTAAATCATCAAAA TERM 139 130653 - 130711 + T 100 -24.7 -3.09516 | gap 1, opp_overlap 130652 130660 130664, overlap 130660 130664 TTTTGATGATTTAAC -TCGATAACAAATTAACAACATAGAAAA TTAA TTTTCTATGTTGTTAATTTGTTATCGAG TTAAATCATCAAAAA TERM 140 130660 - 130703 + T 100 -21.6 -3.36968 | opp_overlap 130652 130660 130664, overlap 130653 130664 GATTTAACTCGATAA CAAATTAACAACATAGAAAA TTAA TTTTCTATGTTGTTAATTTG TTATCGAGTTAAATC TERM 141 130703 - 130660 - T 100 -21.6 -3.36968 | opp_overlap 130660 130653 130664, overlap 130652 130664 GATTTAACTCGATAA CAAATTAACAACATAGAAAA TTAA TTTTCTATGTTGTTAATTTG TTATCGAGTTAAATC TERM 142 130699 - 130664 - T 100 -16.6 -4.33248 | opp_overlap 130660 130653 130664, overlap 130660 130652 TAACTCGATAACAAA TTAACAACATAGAAAA TTAA TTTTCTATGTTGTTAA TTTGTTATCGAGTTA TERM 143 130664 - 130699 + T 100 -16.6 -4.33248 | opp_overlap 130664 130660 130652, overlap 130660 130653 TAACTCGATAACAAA TTAACAACATAGAAAA TTAA TTTTCTATGTTGTTAA TTTGTTATCGAGTTA rpsT 131019 - 130753 - | 30S ribosomal protein S20 ribF 131171 - 132106 + | riboflavin biosynthesis protein RibF TERM 144 133318 - 133298 - g 79 -8.5 -3.93117 | opp_overlap 133295, overlap 133292 CTAATGAGATAATAA TTGATTTAT TAT ATAAATCAA AGAATTTTTTATATT TERM 145 133611 - 133595 - g 81 -2.9 -5.71712 | TTGTACATAAAAAAA CAGAAGT TTT ACATCCG AATACATGTATTTTT ileS 132130 - 134991 + | isoleucyl-tRNA synthetase lspA 135013 - 135474 + | lipoprotein signal peptidase dapB 136567 - 137391 + | dihydrodipicolinate reductase carA 137577 - 138725 + | carbamoyl phosphate synthase small subunit TERM 146 139713 - 139727 + G 70 -8.6 -2.61602 | opp_overlap 139711 139710, overlap 139710 139709 CTATTGCGAAAATTG CTGCTA AAT TAGCAG TAGGTTATACATTAG TERM 147 140231 - 140212 - g 87 -3.7 -5.93809 | overlap 140228 GTTGGATAAAAAAAA TTTGTTT TTTCTT AAACAAA AAGGATTTTCTGATA carB 138746 - 142012 + | carbamoyl-phosphate synthase large chain folA 142060 - 142566 + | dihydrofolate reductase type I apaH 143440 - 142622 - | diadenosine tetraphosphatase ksgA 144369 - 143554 - | dimethyladenosine transferase pdxA 145378 - 144350 - | pyridoxal phosphate biosynthetic protein PdxA TERM 148 144524 - 144508 - G 73 -8.1 -3.39529 | opp_overlap 144502 CCAATGTAATATTAA TGGATTT TCC AAATCCA GAATATTTGAGAACC TERM 149 145264 - 145252 - G 71 -7.7 -3.48593 | opp_overlap 145251 GATCTGCGCATATAA CCAGT TCT ACTGG CCATTTTTTTTGAAG surA 146651 - 145371 - | survival protein SurA precursor imp 149157 - 146701 - | organic solvent tolerance protein precursor TERM 150 146887 - 146877 - G 74 -5.4 -4.91573 | AAAATATACTAAAAA TCCA ACA TGGA GTGAAGTATTGGATT leuD 149950 - 149336 - | isopropylmalate isomerase small subunit TERM 151 149455 - 149471 + g 79 -5.3 -5.24531 | overlap 149452 AAGAATCCTTGATTT TAAAAAA ATA TTTTTTA TTTTTTATAGAAACT leuC 151384 - 149984 - | isopropylmalate isomerase large subunit TERM 152 150049 - 150012 - G 100 -22.9 -4.4017 | opp_overlap 150022, overlap 150013 CGAATGTCGACAAAA TGTCCAGCAATGGCAGC AGCT GCTGCCATTGCTGGACT GACTAAATGAGTAAG TERM 153 150048 - 150013 - G 100 -26.4 -3.2362 | opp_overlap 150022, overlap 150012 GAATGTCGACAAAAT GTCCAGCAATGGCAGC AGCT GCTGCCATTGCTGGAC TGACTAAATGAGTAA TERM 154 150022 - 150039 + g 91 -11.3 -3.16881 | opp_overlap 150013 150012 CAAAATGTCCAGCAA TGGCAGC AGCT GCTGCCA TTGCTGGACTGACTA leuB 152490 - 151396 - | 3-isopropylmalate dehydrogenase leuA 154073 - 152514 - | 2-isopropylmalate synthase TERM 155 153134 - 153144 + g 100 -2.6 -6.47325 | TGTTTTTGGGATTCA TTAT TTC ATAA TTTTTTTTATTTTTT TERM 156 154371 - 154386 + H 72 -3.4 -5.48825 | opp_overlap 154371, overlap 154362 TTGTAATTAAATAAT TTTAAT TTTG ATTAAA TTTTTTTAAATAATA yabC 154460 - 155425 + | putative S-adenosyl methionine adenyltransferase ftsL 155428 - 155739 + | cell division protein FtsL TERM 157 156895 - 156872 - g 72 -2.5 -5.45726 | GATATTTTAAAAAAA TCTAGTAAT GTTGGT ATTTCTAGA TTAGCATTATCTATG ftsI 155840 - 157525 + | penicillin-binding protein 3 precursor TERM 158 158663 - 158695 + G 76 -7.9 -3.89346 | overlap 158694 TGCTCATACTCCAGA TGCTTTGAAAAAAAT TTT AATTTTTGCAAAGCA TTTATGCAATAAAGG murE 157557 - 159056 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase murF 159076 - 160464 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase mraY 160449 - 161546 + | phospho-N-acetylmuramoyl-pentapeptide transferase murD 161558 - 162892 + | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase TERM 159 163839 - 163858 + G 79 -8 -4.23434 | TTATTGGAATGCATG CTTTTGAT ATTG ATCAAAAG TTTTCAGGTGTTTTG ftsW 162965 - 164071 + | cell division protein FtsW murG 164094 - 165176 + | UDP-N-acetylglucosamine:N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 160 166097 - 166119 + G 77 -9.9 -3.01791 | opp_overlap 166088 166096 166097 CATAATGCATTAAAT GCTGCTGCT TCTAT AGCAGTAGC TATTGAAGAAGGGAT murC 165206 - 166648 + | UDP-N-acetylmuramate:alanine ligase TERM 161 167114 - 167125 + G 75 -4.4 -5.24449 | ATGAGTTTATTAGTA CAAC AGGG GTTG TTTTTTCGGTTTCTG ftsQ 166732 - 167562 + | cell division protein FtsQ ftsA 167555 - 168817 + | cell division protein FtsA TERM 162 169221 - 169235 + G 80 -10 -3.29144 | GGGGAGGTACGGGAA CTGGAG CAG CTCCAG TTGTAGCAGAAGTGG ftsZ 168893 - 170068 + | cell division protein FtsZ TERM 163 170666 - 170694 + G 100 -14.9 -3.48036 | GCATTATTTTTTCAA TTTCACTTCTAAA TCG TTTAGAAGTGAAA TTAGTTCTGCTCGTA lpxC 170136 - 171032 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 164 171064 - 171078 + F 72 -3.6 -5.53436 | CAATTATATTGTATA TGACAT AAT ATGTTA TTTTTTGTGTTATCT secA 171410 - 173932 + | preprotein translocase subunit SecA TERM 165 174178 - 174196 + F 73 -9 -2.56349 | opp_overlap 174187, overlap 174177 174175 174185 AAATTTTCTGATTTG TCCTATAT ATA ATATAGGA GTATATTATATTGGT dksA 174973 - 175434 + | dosage-dependent dnaK suppressor protein folK 175495 - 175989 + | 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase lpdA 178012 - 176600 - | dihydrolipoamide dehydrogenase TERM 166 176875 - 176885 + g 70 -4 -4.99134 | GAAAGGTTACAGACG CATA TTT TATG TTTTTAGTTTGAGCT aceF 179418 - 178141 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 167 179178 - 179219 + g 77 -8.3 -3.75418 | opp_overlap 179193 179213, overlap 179168 179181 179209 179213 TAGATTGATCGAGAT CATGAGTTTTAATTATATC TAAA GATATAATTAAGGTTCCTG TTTGAACTTTATCTC TERM 168 179181 - 179216 + g 70 -8.6 -2.66271 | opp_overlap 179193 179213, overlap 179178 179209 179213 ATTGATCGAGATCAT GAGTTTTAATTATATC TAAA GATATAATTAAGGTTC CTGTTTGAACTTTAT aceE 182111 - 179433 - | pyruvate dehydrogenase subunit E1 TERM 169 181431 - 181449 + g 78 -3.2 -5.50313 | TCCTAGAAAAGCATA TACTGTTT GCA AAGTAGTA TTTTTTAATTTTCTA TERM 170 182060 - 182048 - G 72 -6.3 -4.23045 | opp_overlap 182047 182048 GAATTACTGAAGAAA TGGAT TCT ATCCA ATCTTGTGTTTCTAT TERM 171 182193 - 182165 - H 100 -13.5 -4.0371 | opp_overlap 182154 182172 TAGTTTGTATATAAA TATACAATGAATT GCA AATTCATTGTATA GAAAATTTTATTCAA mrcB 182581 - 184923 + | penicillin-binding protein 1b TERM 172 185053 - 185032 - f 80 -7.5 -4.86001 | opp_overlap 185032 ATTATTGTATAAAAA TTATGTAAT TTTA ATTACATAA TTCGTCATTATAGTA TERM 173 185401 - 185416 + G 71 -4.8 -4.81685 | TGATTATTATGAAGG TTTAGA AGGA TCTAAA TTTTTGGTAGTTAAT yadR 185120 - 185479 + | iron-sulfur cluster insertion protein ErpA TERM 174 187167 - 187143 - g 71 -8.7 -2.77167 | GAATAATTGTAAGTA TCCAGTAATTT CGG AGATTACTGGA TATCAATGTACAAAT pyrG 185911 - 187563 + | CTP synthetase eno 187652 - 188995 + | enolase cysJ 189377 - 191209 + | sulfite reductase (NADPH) flavoprotein beta subunit TERM 175 191806 - 191789 - g 88 -2.7 -6.28631 | opp_overlap 191804, overlap 191790 TAAATGAAAAAAAAA TTGAATC TATA GATTCAG AGCCTATTTTAAGTT TERM 176 191805 - 191790 - g 72 -6.2 -4.33519 | opp_overlap 191804, overlap 191789 AAATGAAAAAAAAAT TGAATC TATA GATTCA GAGCCTATTTTAAGT cysI 191209 - 192918 + | sulfite reductase subunit beta TERM 177 193301 - 193285 - g 72 -8.7 -2.91276 | opp_overlap 193287, overlap 193284 TTCGTCCTGATAAAT CTCCTGC TTG GCAGGAA GCACGTTATGGAAAA cysH 192957 - 193697 + | phosphoadenosine phosphosulfate reductase cysG 193837 - 195222 + | siroheme synthase cysD 195282 - 196199 + | sulfate adenylyltransferase subunit 2 TERM 178 197400 - 197386 - g 71 -7.2 -3.86795 | opp_overlap 197386 AAAAAAGTGATGAAA TACCAT ATA ATGGTA TTGGATTGGTAGAAT cysN 196218 - 197660 + | ATP sulfurylase (ATP:sulfate adenyltransferase) subunit 1 cysC 197664 - 198296 + | adenosine 5-phosphosulfate kinase ygbQ 198470 - 198775 + | hypothetical protein TERM 179 198958 - 198981 + F 81 -9.8 -3.64912 | opp_overlap 198958 ACTATTGGAAAAAAA CATTAATTGA GTAT TCAATTAATG TTGTCTGTATCAATC TERM 180 198981 - 198958 - f 100 -9.8 -5.44721 | opp_overlap 198958 ACTATTGGAAAAAAA CATTAATTGA GTAT TCAATTAATG TTGTCTGTATCAATC TERM 181 199278 - 199295 + F 81 -8.5 -4.25325 | opp_overlap 199277 TAATATTATTAAATG CGCTTAT GTAA ATAAGCG TTTAATTTGTTGTAT nlpD 200374 - 201321 + | lipoprotein NlpD precursor TERM 182 202848 - 202866 + G 71 -3.2 -5.20333 | ATGCAAAAACTAGTA CATTTGTA GGT TATAAGTG TTTTTCTTGTCAATC TERM 183 204096 - 204070 - g 84 -6.7 -5.2166 | opp_overlap 204069 TAATAATGTAAAAAA TGTATCTGAAT TAGTC ATACAGATACA GTCATTATTAAATGA alaS 201467 - 204142 + | alanyl-tRNA synthetase csrA 204306 - 204503 + | carbon storage regulator TERM 184 204695 - 204679 - f 70 -8.7 -2.6583 | opp_overlap 204679, overlap 204676 GAGAGGCTAAAGGCA CTCCCCT GCT AAGGGAG TATATAGTCTAAATA TERM 185 204843 - 204827 - f 70 -8.7 -2.69468 | opp_overlap 204839, overlap 204824 204839 CAGTTGGATAGAGCA CTCGGCT ACG AACCGAG AGGTCGGGGGTTCAA ffh 205013 - 206386 + | GTP-binding signal recognition particle protein TERM 186 206394 - 206413 + F 74 -6.6 -4.42868 | opp_overlap 206379, overlap 206391 TAAAATAGTGAGTAT TTTAATCT AAAT AGATTAAA TATTTTTTATTGTAT rpsP 206462 - 206710 + | 30S ribosomal protein S16 rimM 206757 - 207314 + | 16S rRNA processing protein trmD 207348 - 208094 + | tRNA(guanine-N1)methyltransferase rplS 208123 - 208476 + | 50S ribosomal protein L19 aroF 208858 - 209943 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 187 210236 - 210217 - g 70 -3.6 -5.1166 | TATGAAAATGAAAAA GGATTTAA AAAG TTATATCC AAGTTCTAGGCCAGT tyrA 209950 - 211083 + | bifunctional chorismate mutase/prephenate dehydrogenase pheA 212052 - 211156 - | chorismate mutase/prephenate dehydratase TERM 188 211657 - 211671 + g 78 -4.3 -5.41746 | opp_overlap 211657, overlap 211661 211664 TTCACATAAAATAAT TTTCC AGTGA GGAAA TTTTTTTAAAAAATT yfiO 212889 - 212149 - | putative lipoprotein TERM 189 213230 - 213210 - g 70 -4.1 -4.94058 | opp_overlap 213212, overlap 213199 TTAATTGAAATAAAA TATATCAAT AAT AATGATATA TGTAAGAGTGAAGAT rluD 213012 - 213977 + | pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) TERM 190 214024 - 214000 - f 95 -10.3 -4.9725 | opp_overlap 214000 213996 214005 214023, overlap 214015 ATGTTTATATAAAAA TACAATATTAT TTA ATAATATTGTA TTAATTAATTTAATA TERM 191 214000 - 214024 + F 83 -10.3 -3.51202 | opp_overlap 214000 214015, overlap 213996 214005 214023 ATGTTTATATAAAAA TACAATATTAT TTA ATAATATTGTA TTAATTAATTTAATA TERM 192 215284 - 215297 + G 71 -6.7 -3.89822 | ACTGATCCTGCGATA GTAGC CGCA GCTAC TTTATCGAATAGATA TERM 193 216466 - 216445 - g 76 -8.9 -3.43722 | opp_overlap 216444 216447, overlap 216443 TTCATTAATAGAATA GATGAAATA GTAG TATTTCATC CTCTTAGCATCAAAC clpB 214168 - 216786 + | ATP-dependent protease, Hsp 100, part of novel multi-chaperone system with DnaK, DnaJ, and GrpE murB 216984 - 218021 + | UDP-N-acetylenolpyruvoylglucosamine reductase birA 218136 - 218960 + | bifunctional protein: biotin operon repressor and biotin-[acetyl-CoA carboxylase] synthetase TERM 194 219738 - 219721 - f 73 -7.1 -4.10007 | opp_overlap 219720 ATAATGTGTGTAAAA GTATATG AATA CATATAC ATTGGATATTTAATT TERM 195 220658 - 220644 - g 71 -7.2 -3.80115 | TTAAACAATATAGAA CATACA GAA TGTATG GAGGAATTAGAACAT bfr 220512 - 220982 + | bacterioferritin rpsJ 221115 - 221426 + | 30S ribosomal protein S10 rplC 221527 - 222186 + | 50S ribosomal subunit protein L3 rplD 222183 - 222821 + | 50S ribosomal protein L4 rplW 222830 - 223129 + | 50S ribosomal subunit protein L23 rplB 223151 - 223981 + | 50S ribosomal protein L2 rpsS 224008 - 224289 + | 30S ribosomal protein S19 rplV 224342 - 224671 + | 50S ribosomal subunit protein L22 TERM 196 225312 - 225296 - g 82 -10.9 -2.64925 | overlap 225295 ATAGTTTATCAGAAG CCCATAC TTC GTATGGG GTAGTAGGGGTTAAA rpsC 224731 - 225438 + | 30S ribosomal protein S3 rplP 225456 - 225857 + | 50S ribosomal protein L16 rpmC 225862 - 226062 + | 50S ribosomal subunit protein L29 rpsQ 226109 - 226366 + | 30S ribosomal subunit protein S17 TERM 197 226379 - 226352 - f 88 -6.6 -5.67063 | gap 1, opp_overlap 226357 226376, overlap 226354 226357 226376 TCGATTATAAAAAAA TATAATTCTTCTT AAT AAGAAGAATT-TA TTTATATAAATTTAG TERM 198 226378 - 226354 - f 76 -7.3 -4.47611 | opp_overlap 226357 226376, overlap 226352 226357 226376 GATTATAAAAAAATA TAATTCTTCTT AAT AAGAAGAATTT ATTTATATAAATTTA TERM 199 226375 - 226357 - f 83 -9 -4.31185 | opp_overlap 226357, overlap 226354 226352 TATAAAAAAATATAA TTCTTCTT AAT AAGAAGAA TTTATTTATATAAAT TERM 200 226357 - 226375 + F 89 -9 -4.63044 | opp_overlap 226357 226354 226352 TATAAAAAAATATAA TTCTTCTT AAT AAGAAGAA TTTATTTATATAAAT rplN 226450 - 226821 + | 50S ribosomal protein L14 rplX 226853 - 227173 + | 50S ribosomal protein L24 rplE 227197 - 227769 + | 50S ribosomal protein L5 TERM 201 227962 - 227989 + G 86 -7.1 -5.01732 | gap 1, opp_overlap 227960, overlap 227961 227964 CTAGATTACGTAATC GT-TGTGGACGA ACAGG TCGTCCACATGC TTTTTTAAGAAAATT TERM 202 227964 - 227986 + G 95 -12.1 -3.37655 | opp_overlap 227960, overlap 227961 227962 AGATTACGTAATCGT TGTGGACGA ACAGG TCGTCCACA TGCTTTTTTAAGAAA rpsN 227775 - 228080 + | 30S ribosomal subunit protein S14 rpsH 228132 - 228527 + | 30S ribosomal protein S8 rplF 228550 - 229095 + | 50S ribosomal protein L6 rplR 229150 - 229503 + | 50S ribosomal protein L18 rpsE 229516 - 230049 + | 30S ribosomal subunit protein S5 rpmD 230055 - 230231 + | 50S ribosomal subunit protein L30 rplO 230238 - 230681 + | 50S ribosomal subunit protein L15 TERM 203 231467 - 231453 - g 78 -6.4 -4.74504 | overlap 231462 ATGCTAACCCAAAAA GACAAC AAG GTCGTC GAATGTATTCGACAC TERM 204 231520 - 231544 + G 72 -7.9 -3.66378 | opp_overlap 231520, overlap 231541 ACCTCTTAAAGTTAA TATGGCTGGGG TTA TTCCAGCTATA TTTGCATCAAGTATA secY 230690 - 232045 + | preprotein translocase subunit SecY rpmJ 232091 - 232207 + | 50S ribosomal subunit protein L36 TERM 205 232551 - 232567 + G 81 -9.5 -3.57144 | GGTACATATCGCGGT TTACGTC ATA GACGTAA TTTGCCAGTAAGAGG rpsM 232287 - 232643 + | 30S ribosomal protein S13 rpsK 232707 - 233099 + | 30S ribosomal protein S11 rpsD 233135 - 233758 + | 30S ribosomal protein S4 rpoA 233794 - 234789 + | DNA-directed RNA polymerase subunit alpha rplQ 234854 - 235231 + | 50S ribosomal protein L17 fmt 236277 - 235306 - | methionyl-tRNA formyltransferase TERM 206 236021 - 236032 + g 74 -3 -5.34555 | opp_overlap 236021 ACAACTATTATTATA TCTA TATT TAGA TTTTTTATAATATGA def 236831 - 236304 - | polypeptide deformylase yrdC 237099 - 237668 + | hypothetical protein TERM 207 237867 - 237886 + G 76 -2.8 -5.60689 | overlap 237852 237869 237875 GGGGCAAATATTACT GTCCCTTT TAAA AAACGGGC TTTTTTATTATGTGA aroE 237684 - 238568 + | shikimate 5-dehydrogenase gloB 239591 - 238821 - | hydroxyacylglutathione hydrolase rnhA 240144 - 239641 - | ribonuclease H TERM 208 240586 - 240552 - g 71 -8.8 -2.80622 | opp_overlap 240552 240559, overlap 240551 240559 AATATTTATTTAAAT TCTAGAACAGTAGAAT CAT ATTGTACTGTTATAGA TAGTCTCAAGCTTGC TERM 209 240552 - 240586 + G 70 -8.8 -2.63631 | opp_overlap 240551 240552 240559, overlap 240559 AATATTTATTTAAAT TCTAGAACAGTAGAAT CAT ATTGTACTGTTATAGA TAGTCTCAAGCTTGC dnaQ 240201 - 240977 + | DNA polymerase III epsilon subunit TERM 210 241021 - 240975 - f 100 -15 -3.67976 | opp_overlap 240982 240983 240988, overlap 240978 240979 TGGAGGAAGTGTAAA TAATTGACTATAATTTATATAT TAA ATATATAAATTATAGTCATTCA AGACGTATATTGTTC TERM 211 241018 - 240978 - f 100 -14.5 -3.97019 | opp_overlap 240982 240983 240988, overlap 240975 240979 AGGAAGTGTAAATAA TTGACTATAATTTATATAT TAA ATATATAAATTATAGTCAT TCAAGACGTATATTG TERM 212 241017 - 240979 - f 100 -18 -2.97489 | opp_overlap 240982 240983 240988, overlap 240978 240975 GGAAGTGTAAATAAT TGACTATAATTTATATAT TAA ATATATAAATTATAGTCA TTCAAGACGTATATT TERM 213 240982 - 241014 + F 95 -13.9 -2.71483 | opp_overlap 240979 240978 240975, overlap 240983 240988 AGTGTAAATAATTGA CTATAATTTATATAT TAA ATATATAAATTATAG TCATTCAAGACGTAT TERM 214 241083 - 241107 + F 74 -7.4 -4.25754 | ATATTTCGTTGTTTT TCAATAATAA AGAGA TTATTATTGA TTTGATTGTTTTTAG TERM 215 241616 - 241585 - g 74 -8.4 -3.57462 | gap 1, opp_overlap 241583 241585 241589, overlap 241589 GATGGTAGTTGTAAA CAAATTTCTA-ATTA TGT TAATGTAGAAATTTG TATTCCATATGCAGA TERM 216 241585 - 241616 + G 70 -8.4 -3.12327 | gap 1, opp_overlap 241585 241589, overlap 241583 241589 GATGGTAGTTGTAAA CAAATTTCTA-ATTA TGT TAATGTAGAAATTTG TATTCCATATGCAGA gmhA 241132 - 241713 + | phosphoheptose isomerase TERM 217 242065 - 242007 - T 100 -17.4 -3.34222 | gap 3, opp_overlap 242010 242013, overlap 242015 ATTATGATTTTATAA TGGGAATACTTGACTAACCACTTGTCTCA TAAT TGAGACAAGTGGTTAGTCAAGTATTC--- TTCTACACTATCTTG TERM 218 242010 - 242065 + T 100 -35.4 -3.36648 | opp_overlap 242007 242015, overlap 242013 ATGATTTTATAATGG GAATACTTGACTAACCACTTGTCTCA TAAT TGAGACAAGTGGTTAGTCAAGTATTC TTCTACACTATCTTG TERM 219 242013 - 242062 + T 100 -31.3 -3.81447 | opp_overlap 242007 242015, overlap 242010 ATTTTATAATGGGAA TACTTGACTAACCACTTGTCTCA TAAT TGAGACAAGTGGTTAGTCAAGTA TTCTTCTACACTATC TERM 220 242060 - 242015 - T 100 -29.5 -3.11291 | opp_overlap 242013 242010, overlap 242007 TTTATAATGGGAATA CTTGACTAACCACTTGTCTCA TAAT TGAGACAAGTGGTTAGTCAAG TATTCTTCTACACTA ahpC 242632 - 242033 - | alkyl hydroperoxide reductase C22 protein TERM 221 243272 - 243250 - g 70 -5 -4.64598 | opp_overlap 243250 243256 CAATTAGGTGAAAAA TTTATATTAG GAT CTAATTTAAA TATATATATATATGT queA 242932 - 243993 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase tgt 244122 - 245258 + | queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase yajC 245301 - 245648 + | preprotein translocase YajC subunit TERM 222 246508 - 246491 - g 79 -7.1 -4.4078 | TTTCTGTAATTAAAA CAGTATT AAAT AATACTG CAAGTCTTGAATTTC TERM 223 246597 - 246564 - g 74 -7.7 -3.82486 | opp_overlap 246567, overlap 246567 ATTTAAGATTAATAA TAATTATATTCCAGA GGAT TCTGAAATAAAATTA GATGATAATGGTAAT TERM 224 247164 - 247182 + G 73 -9 -3.18065 | AGTTAGTTTGTTGTC TGTAATAC CTG GTATTACA TTAACTATGTCTAGT secD 245653 - 247527 + | preprotein translocase subunit SecD secF 247568 - 248470 + | preprotein translocase subunit SecF TERM 225 248668 - 248696 + F 70 -8.4 -2.53192 | overlap 248663 248665 248664 GTTATATTTCTGTAT CTATACATATAT AGAAA ATATATGTATGG CTAGTTATTTTTTAA ribD 248862 - 249998 + | bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesis TERM 226 250556 - 250569 + G 74 -8.1 -3.59315 | opp_overlap 250556 AATAAAGGTAGTGAA GCTGC TTTA GCAGC TTTAGAAATGATTAA TERM 227 250569 - 250556 - g 70 -8.1 -3.12847 | opp_overlap 250556 AATAAAGGTAGTGAA GCTGC TTTA GCAGC TTTAGAAATGATTAA ribH 250136 - 250615 + | 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase beta chain) nusB 250640 - 251056 + | transcription antitermination protein NusB pgpA 251094 - 251570 + | phosphatidylglycerophosphatase A TERM 228 251616 - 251630 + T 74 -5.8 -4.89852 | TGAAAGGATTGTTGG TCTAAA GTA TTTAGA TTTTTATCCATCTAA dxs 253479 - 251626 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 229 251838 - 251856 + g 80 -2.4 -5.80364 | CTAAAGTAATAAAAG CTTGATGA TTT TCAGTAAG TTTTTTTATTAACAT thiI 254257 - 255735 + | thiamine biosynthesis protein ThiI TERM 230 255849 - 255897 + T 100 -28.1 -3.97602 | opp_overlap 255849 255856, overlap 255856 TAATATATTGATAAA TACTAAATTACAGCAACCATATT ATT AATATGGTTGCTGTAATTTAGTA TTTATCAATATATTA TERM 231 255897 - 255849 - T 100 -28.1 -3.97602 | opp_overlap 255849 255856, overlap 255856 TAATATATTGATAAA TACTAAATTACAGCAACCATATT ATT AATATGGTTGCTGTAATTTAGTA TTTATCAATATATTA TERM 232 255890 - 255856 - T 100 -20.4 -4.04579 | opp_overlap 255849 255856, overlap 255849 TTGATAAATACTAAA TTACAGCAACCATATT ATT AATATGGTTGCTGTAA TTTAGTATTTATCAA TERM 233 255856 - 255890 + T 100 -20.4 -4.04579 | opp_overlap 255856 255849, overlap 255849 TTGATAAATACTAAA TTACAGCAACCATATT ATT AATATGGTTGCTGTAA TTTAGTATTTATCAA yajR 257057 - 255873 - | MFS family transporter TERM 234 257137 - 257119 - R 75 -9 -3.12856 | opp_overlap 257112 257118 257126 257129, overlap 257117 257126 257129 TAGATATTTAATATA TACGATAT TAT ATATCGTA ATGATATATTATTTT cyoE 258063 - 257182 - | protohaeme IX farnesyltransferase (haeme O biosynthesis) TERM 235 257781 - 257797 + g 74 -5.2 -5.00884 | opp_overlap 257781 ATGTATTTAAAATAA TAGCAT ATATA ATGCTA TTTTTTACAAAACAT cyoD 258396 - 258094 - | cytochrome O ubiquinol oxidase subunit CyoD cyoC 258991 - 258401 - | cytochrome o ubiquinol oxidase subunit III cyoB 260939 - 258975 - | cytochrome o ubiquinol oxidase subunit I TERM 236 259542 - 259531 - G 70 -5.8 -4.33956 | CCTAAAATATATAAA GGCA TAAA TGCC ACGTAAAAACCAATT cyoA 261893 - 261009 - | cytochrome o ubiquinol oxidase subunit II TERM 237 263055 - 263068 + G 71 -2.3 -5.4833 | TGTATAGGTCAAGCA GCTTC TATG GGGGC TTTTTTATTGGCTGC clpP 262722 - 263351 + | ATP-dependent Clp protease proteolytic subunit clpX 263539 - 264819 + | ATP-dependent protease ATP-binding subunit yggX 265176 - 264937 - | hypothetical protein mutY 266297 - 265230 - | A/G-specific adenine glycosylase yqgF 267389 - 266961 - | putative endonuclease involved in recombination yqgE 267967 - 267386 - | hypothetical protein TERM 238 267721 - 267702 - G 70 -3.6 -5.10933 | GTATGTAAAATAAAA CCTCTATC ATTT AATAAAGG TCCGCCTGAAAATAC TERM 239 268030 - 268005 - R 72 -7.9 -3.49818 | opp_overlap 268004 268005 268009 268014, overlap 268001 268009 268013 268014 ATAAATAAAACTGAA TAAATTAATTT AATT AAATTAATTTA ATTAATAATATAATA metK 269533 - 268376 - | S-adenosylmethionine synthetase TERM 240 269054 - 269066 + g 82 -4.1 -5.59655 | GTCTAATCCTAGCCA TGGTA AAG TGCCA TTTTTTCTTAATTTA TERM 241 270292 - 270279 - g 83 -2.4 -5.93809 | GTTTTAGAAAAAAAA TCCT TTTATT AGGA GGAGATCATTATATT speB 269924 - 270835 + | agmatinase TERM 242 271102 - 271125 + F 79 -9.8 -3.14026 | opp_overlap 271102 ATGATTCAAGATAAA TTTTGACTAA TGTG TTAGTCAAAA TTGAGTATAGATATG TERM 243 271125 - 271102 - f 85 -9.8 -4.22009 | opp_overlap 271102 ATGATTCAAGATAAA TTTTGACTAA TGTG TTAGTCAAAA TTGAGTATAGATATG TERM 244 271832 - 271844 + G 75 -4.9 -5.02074 | TAATAGTAGGAGGAG GTATT GCT AATAC TTTTTTAGCGGCTCA TERM 245 272182 - 272166 - g 77 -8.1 -3.78351 | opp_overlap 272166 272167 272169 272171 AGAAATGGTATCAAA TGCTATT GCT AATAGCA ATGCTTTTTCTATTG TERM 246 272167 - 272186 + G 79 -5.8 -5.0916 | gap 1, opp_overlap 272166, overlap 272166 272169 272171 GAAATGGTATCAAAT GCTATTGCT AAT AGCAAT-GC TTTTTCTATTGCAGG pgk 271177 - 272379 + | phosphoglycerate kinase fba 272472 - 273548 + | fructose-bisphosphate aldolase rpiA 273801 - 274469 + | ribose-5-phosphate isomerase A ygfA 275194 - 274607 - | putative ligase ygfE 275633 - 275289 - | Z-ring-associated protein TERM 247 276682 - 276697 + G 72 -5.4 -4.70169 | TTTGAGCGATTTACA CCGTTG GGCC CAATGG TTTTATTACCTATGG TERM 248 277183 - 277193 + G 76 -5.4 -5.03747 | GGTTTATTTTTTATG GAAC ATT GTTC TTTTTTCAAACGTTT ubiH 276061 - 277245 + | 2-octaprenyl-6-methoxyphenol hydroxylase TERM 249 277575 - 277608 + T 93 -11.4 -3.52482 | opp_overlap 277574, overlap 277574 277571 TGTATTGTTATTAAT TTTAATCTTATGTA GATTAG TACATAAGATTAAA TATTGTTGTGATATT ygfZ 278759 - 277749 - | putative aminomethyltransferase TERM 250 277896 - 277917 + g 72 -4.5 -4.9041 | AGATTGTAATACAGT TCCAATATG CTTC CATATTTGA TTGTTTTTTTGTCGT prfB 279048 - 280145 + | peptide chain release factor 2 TERM 251 281190 - 281180 - g 78 -4 -5.46657 | opp_overlap 281180 TATTCGAACAAAAAA TATC GAT GATA TATTAGTTGTTTTTG TERM 252 281512 - 281491 - g 78 -3.1 -5.50925 | overlap 281506 AAGCAACAGAAAAAA TGATTAATA ATGA TATTGATCA AGATGAATCAAATAT lysS 280221 - 281678 + | lysyl-tRNA synthetase lysA 281804 - 283081 + | diaminopimelate decarboxylase TERM 253 283065 - 283120 + F 100 -24.8 -3.96932 | opp_overlap 283065, overlap 283083 TATTTTCTTTGGAAA TTTCACATACAGTATAAATATAGTTT TAAA AAATTATATTTATACTGTATGTGAAA TTTATACATATCTAT TERM 254 283120 - 283065 - f 100 -22.6 -3.53224 | opp_overlap 283065 283083 TATTTTCTTTGGAAA TTTCACATACAGTATAAATATAGTTT TAAA AAATTATATTTATACTGTATGTGAAA TTTATACATATCTAT ygdP 283319 - 283795 + | dinucleoside polyphosphate hydrolase lgt 283950 - 284804 + | prolipoprotein diacylglyceryl transferase TERM 255 285855 - 285843 - g 85 -3.5 -5.66684 | overlap 285846 GAAGTTAGAAAAAAA TATTA TTA TAATA ATAGATGTAATAAAA TERM 256 287243 - 287289 + G 100 -17.9 -3.16323 | gap 1, opp_overlap 287254, overlap 287244 287246 287254 GGCGTTTTGTTATGG TA-ATTCTATAAGCTCATCAAT TTTT ATTGATGAGCTTATAGAATATA TTGCTCAAAGATTTT TERM 257 287244 - 287287 + G 100 -18.6 -3.13899 | opp_overlap 287254, overlap 287243 287246 287254 GCGTTTTGTTATGGT AATTCTATAAGCTCATCAAT TTTT ATTGATGAGCTTATAGAATA TATTGCTCAAAGATT TERM 258 287246 - 287285 + G 100 -21.2 -3.12895 | opp_overlap 287254, overlap 287244 287243 287254 GTTTTGTTATGGTAA TTCTATAAGCTCATCAAT TTTT ATTGATGAGCTTATAGAA TATATTGCTCAAAGA TERM 259 287254 - 287277 + G 100 -12.6 -3.36648 | opp_overlap 287254, overlap 287246 287244 287243 ATGGTAATTCTATAA GCTCATCAAT TTTT ATTGATGAGC TTATAGAATATATTG TERM 260 287277 - 287254 - g 100 -12.6 -3.36671 | opp_overlap 287254 287246 287244 287243 ATGGTAATTCTATAA GCTCATCAAT TTTT ATTGATGAGC TTATAGAATATATTG recC 285021 - 288440 + | exonuclease V, subunit recD 290416 - 288494 - | exonuclease V, alpha chain recB 294249 - 290623 - | exonuclease V, beta chain TERM 261 291075 - 291106 + g 100 -16.2 -4.10429 | opp_overlap 291065 291077 291079 291083, overlap 291083 TTAAAGTATTTTTAA TACACAAACTGAAT TTTA ATTCAGTTTGTGTA TTTTCAGGAATAATT TERM 262 291104 - 291077 - G 100 -14.4 -3.05536 | opp_overlap 291075 291083, overlap 291079 291083 AAAGTATTTTTAATA CACAAACTGAAT TTTA ATTCAGTTTGTG TATTTTCAGGAATAA TERM 263 291102 - 291079 - G 91 -11.2 -3.08073 | opp_overlap 291075 291083, overlap 291077 291083 AGTATTTTTAATACA CAAACTGAAT TTTA ATTCAGTTTG TGTATTTTCAGGAAT TERM 264 291098 - 291083 - G 72 -6.2 -4.2074 | opp_overlap 291075 291083, overlap 291079 291077 TTTTTAATACACAAA CTGAAT TTTA ATTCAG TTTGTGTATTTTCAG TERM 265 291083 - 291098 + g 72 -6.2 -4.33956 | opp_overlap 291083 291079 291077, overlap 291075 TTTTTAATACACAAA CTGAAT TTTA ATTCAG TTTGTGTATTTTCAG TERM 266 291334 - 291295 - G 100 -9.4 -4.59511 | opp_overlap 291286 291285 291277 291302 291304 291306, overlap 291285 291298 AAGATCGTGGAAAAA CATTCCACATACTTTTCC TTTA GGAAAAGTATGTGCTGTG AGTAAATTTGATGGA TERM 267 291331 - 291298 - G 77 -9.7 -2.93975 | opp_overlap 291286 291285 291277 291302 291304 291306, overlap 291285 291295 ATCGTGGAAAAACAT TCCACATACTTTTCC TTTA GGAAAAGTATGTGCT GTGAGTAAATTTGAT TERM 268 291302 - 291327 + g 100 -13.5 -2.65112 | opp_overlap 291285 291298 291295, overlap 291285 291277 291304 291306 TGGAAAAACATTCCA CATACTTTTCC TTTA GGAAAAGTATG TGCTGTGAGTAAATT TERM 269 291304 - 291325 + g 78 -10.3 -2.8655 | opp_overlap 291298 291295, overlap 291277 291302 291306 GAAAAACATTCCACA TACTTTTCC TTTA GGAAAAGTA TGTGCTGTGAGTAAA TERM 270 292633 - 292657 + g 85 -8.1 -4.3739 | TTCTAACCAAGCTGT TTTATTGTGTA TAT TATACAATAAA TTTTGTAAAACAATA TERM 271 293689 - 293706 + g 73 -8.5 -3.42283 | overlap 293688 ATCTTTTAGTAGTTC TTCTGGA TTTT TCCAGAA TGTTTGAATAAGTTG dapD 295209 - 294367 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase map 296016 - 295222 - | methionine aminopeptidase TERM 272 296472 - 296461 - g 89 -4.4 -5.95166 | TCGAATTAAAAAAAA TTGC TTTA GCAA AGGGCAAAATTTTAT rpsB 296283 - 296978 + | 30S ribosomal protein S2 TERM 273 297070 - 297057 - f 76 -5.3 -5.16841 | TTATAGGAATAAAAA CATGA TTGA TCATG TAAACAGCGATTTGA tsf 297058 - 297867 + | elongation factor Ts pyrH 298001 - 298732 + | uridine 5'-monophosphate kinase frr 298800 - 299366 + | ribosome recycling factor TERM 274 299383 - 299405 + F 77 -8 -4.06611 | opp_overlap 299388, overlap 299388 TATGAGTGAAATGTG TAAAATTTAT TGT ATAAATTTTA TTATTATTATAATTA dxr 299486 - 300661 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase uppS 300736 - 301488 + | undecaprenyl pyrophosphate synthetase cdsA 301540 - 302406 + | phosphatidate cytidylyltransferase yaeL 302432 - 303820 + | putative membrane-associated Zn-dependent protease TERM 275 304038 - 304052 + G 81 -3.6 -5.56263 | overlap 304016 AGTAATAAAAATGTT TCTGAT AGT ATTAGA TTTTTATTTTCTACT TERM 276 304886 - 304900 + G 76 -5 -5.0916 | overlap 304887 ATTACATATATATAT TGATGT AGG ACATCG TTTTTATGTTCGAGA TERM 277 305110 - 305084 - g 100 -12.6 -3.1319 | opp_overlap 305088, overlap 305088 TGAAAATGTACCTAA TAAATCAAATCA AGT TGATTTGATTTA TAAAATTGAGGAACT TERM 278 305088 - 305106 + G 82 -9 -3.92522 | opp_overlap 305084 305088 AATGTACCTAATAAA TCAAATCA AGT TGATTTGA TTTATAAAATTGAGG TERM 279 305106 - 305088 - g 84 -9 -4.21631 | opp_overlap 305088, overlap 305084 AATGTACCTAATAAA TCAAATCA AGT TGATTTGA TTTATAAAATTGAGG yaeT 303837 - 306302 + | outer membrane protein precursor hlpA 306394 - 306900 + | histone-like protein, located in outer membrane TERM 280 307077 - 307062 - g 90 -7.6 -5.0133 | TACTTTTTTAAAAAA TTCTCG GTTT CGAGAA CAATTAAAGTCTTGT TERM 281 307115 - 307130 + G 70 -4 -5.00846 | opp_overlap 307111, overlap 307111 CCGCTGTAATATTAT CTCAAG ATAA TTTGAG TTTTTGTCGTGTTTC lpxD 306928 - 308037 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase fabZ 308041 - 308496 + | (3R)-hydroxymyristoyl-ACP dehydratase lpxA 308500 - 309288 + | UDP-N-acetylglucosamine acyltransferase lpxB 309315 - 310469 + | lipid-A-disaccharide synthase rnhB 310493 - 311110 + | ribonuclease HII TERM 282 314499 - 314489 - g 72 -2.6 -5.46657 | opp_overlap 314489 314493, overlap 314493 TATTGCAATAAAAAA TTAT TAA ATAA TATTTATTATATTTT dnaE 311183 - 314683 + | DNA polymerase III, alpha chain accA 314706 - 315665 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha mesJ 315871 - 317466 + | cell cycle protein MesJ proS 319333 - 317588 - | prolyl-tRNA synthetase accC 321577 - 320225 - | acetyl CoA carboxylase, biotin carboxylase subunit accB 322030 - 321596 - | acetylCoA carboxylase, BCCP subunit, carrier of biotin aroQ 322506 - 322066 - | 3-dehydroquinate dehydratase mreB 322853 - 323896 + | rod shape-determining protein MreB mreC 323987 - 324805 + | rod shape-determining protein MreC mreD 324845 - 325333 + | rod shape-determining protein MreD tldD 325620 - 327092 + | TldD protein pmbA 327138 - 328481 + | putative PmbA protein lon 328887 - 331223 + | Lon protease apt 331775 - 332326 + | adenine phosphoribosyltransferase dnaX 332391 - 334016 + | DNA polymerase III subunit gamma adk 334622 - 335302 + | adenylate kinase ybbF 336046 - 335303 - | UDP-2,3-diacylglucosamine hydrolase cysS 336243 - 337667 + | cysteinyl-tRNA synthetase folD 338554 - 337664 - | FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase TERM 283 337904 - 337879 - G 76 -9.8 -2.86426 | overlap 337876 337881 CAACATCTATAACTA TAGCTCCTGG TTTTAT CCAGGAACTA GGGAGAAAATTGGCT TERM 284 338569 - 338598 + H 78 -7.3 -4.61353 | TTTAACAATACATTC CACAGTCATTATA AATA TATAATGATGGTG TTATTTTTATATATA TERM 285 338773 - 338759 - H 70 -7.8 -3.34936 | opp_overlap 338759 338756 AATAGGATAGAGTAA CGGCCT TCT AAGCCG TAAGTTATAGGTTCG TERM 286 339287 - 339265 - g 71 -8 -3.38559 | opp_overlap 339265 ACGATAAGTTCACAA TTTTTTTTAT CAG ATAAAAAAAA TTTGTTTGGTCATGC TERM 287 339265 - 339287 + G 82 -8 -4.51743 | opp_overlap 339265 ACGATAAGTTCACAA TTTTTTTTAT CAG ATAAAAAAAA TTTGTTTGGTCATGC TERM 288 339621 - 339639 + G 93 -6 -5.77677 | overlap 339623 TGAATTTACTTTGCC TTTAGGTC CTA GACCTATA TTTTTTATTGTTTTA TERM 289 339623 - 339637 + G 88 -8.6 -4.47161 | overlap 339621 AATTTACTTTGCCTT TAGGTC CTA GACCTA TATTTTTTATTGTTT TERM 290 339677 - 339692 + G 88 -4 -5.78622 | TAATTGGATTTTGTT GTTCTT GGTT AGGAAC TTTTTTTTGGAATGA ytfF 338935 - 339897 + | hypothetical protein mrdB 341089 - 339974 - | rod shape-determining membrane protein; cell elongation in e phase TERM 291 340115 - 340077 - G 86 -9.7 -3.80858 | CCATAACTTACTAAA GGTAATGGGATTCCTAC TACGG GTAATAATCCCATAACC ATGCCTACATTCATA TERM 292 340414 - 340431 + g 76 -9.9 -2.65388 | opp_overlap 340412 340405, overlap 340413 GAATAATATGATATC CTGATCC TAAT GGATCAG ATTCTGGATTCCATA TERM 293 340916 - 340938 + g 72 -5 -4.7033 | opp_overlap 340919 CACCAACATTATCGA TAATCCAA TGATAAT TTGGATTA TTTTGTGTTGGATTA mrdA 342966 - 341107 - | penicillin-binding protein 2 TERM 294 341616 - 341633 + g 79 -5.5 -5.11475 | opp_overlap 341612 CTACAGATATAGTAT CTCCTTG ATAC CATGGAG TTTTATATTTTTTTA TERM 295 342750 - 342779 + g 70 -5.9 -4.30034 | opp_overlap 342750 342753, overlap 342740 342739 CGTTACGATCATAAA TAATACCTCTTTT TGGA GAAATAGGTATTA TTTTGATGCGGTTTT ybeB 343366 - 343061 - | hypothetical protein TERM 296 343303 - 343321 + g 73 -9 -3.11922 | opp_overlap 343302 343303 TTTTATTATGAATAT CAAAACAT ATA ATGTTTTG TCCTTTTAAATCATC TERM 297 343321 - 343303 - G 70 -9 -2.50016 | opp_overlap 343303, overlap 343302 TTTTATTATGAATAT CAAAACAT ATA ATGTTTTG TCCTTTTAAATCATC TERM 298 343530 - 343504 - R 95 -11.2 -3.96449 | opp_overlap 343505 343507, overlap 343516 TAAGATTTCAAATAA TTATTGTTAATA TAA TATTAACAATAA TATCAATACCATTAC TERM 299 343507 - 343527 + r 70 -8.5 -2.64735 | opp_overlap 343504 343516, overlap 343505 GATTTCAAATAATTA TTGTTAATA TAA TATTAACAA TAATATCAATACCAT holA 344675 - 343641 - | DNA polymerase III, delta subunit TERM 300 344047 - 344080 + g 78 -3.3 -5.61596 | gap 1, opp_overlap 344077 TTAAAACAGGCTGAA TCAGTTATGAT-GTTT TTT AACCGATCAAAACTGA TTTTTTTATCAGGAT rlpB 345364 - 344753 - | rare lipoprotein B precursor TERM 301 345323 - 345308 - GR 72 -4.8 -4.98616 | opp_overlap 345301 345308 345317, overlap 345301 TGAAAATATGAAAAA TTCATT TAGT AATGAA ATTAATGATTTTATT leuS 347912 - 345309 - | leucyl-tRNA synthetase TERM 302 347612 - 347625 + gr 85 -2.4 -6.06529 | overlap 347602 GAATGTTGGAATATG TCCA ATCTGA TGGA TTTTTTTTATGTATA TERM 303 347691 - 347671 - GR 72 -6.1 -4.27316 | GCTGGTAATCCAAAA GCATCCCAT CCA ATAGGTTGC AAGACATTTTTACCT lnt 349649 - 348081 - | apolipoprotein N-acyltransferase TERM 304 349037 - 349014 - G 85 -11.2 -2.63596 | TTGTACCTGATACCA TTGTATCCAT GATA ATGGATACAA GCATGCTAATATTAT TERM 305 349151 - 349183 + g 95 -12.1 -3.70902 | opp_overlap 349133 349154, overlap 349154 TCCCTTCTACTCCTA AAAGTGGACCAATAC CAC GTATTGGTCCACTGA TTTGGCTATAACCAA TERM 306 349180 - 349154 - G 100 -18.2 -4.11216 | opp_overlap 349151 349154, overlap 349133 CTTCTACTCCTAAAA GTGGACCAATAC CAC GTATTGGTCCAC TGATTTGGCTATAAC TERM 307 349154 - 349180 + g 100 -18.2 -2.95942 | opp_overlap 349133 349154, overlap 349151 CTTCTACTCCTAAAA GTGGACCAATAC CAC GTATTGGTCCAC TGATTTGGCTATAAC ybeX 350561 - 349686 - | haemolysin-related protein ybeY 351064 - 350603 - | hypothetical protein TERM 308 350945 - 350970 + g 85 -2.8 -5.96219 | overlap 350950 350956 GCGAATAGTTAATTC TATTTTTTTT TTAGAT GAAAAAAATA TTTTTTTTATCCATA phoL 352168 - 351161 - | PhoH-like ATP-binding protein TERM 309 351687 - 351670 - G 70 -8.5 -3.09288 | opp_overlap 351671, overlap 351669 GACGTTCTAACAAAT CTATAGC TGTA GCTATAG CTAAATATGTTTTAC TERM 310 353564 - 353593 + G 86 -7.5 -5.3104 | gap 1, opp_overlap 353564 353566 353567 353569 353574, overlap 353567 ACAATTTGACATTAA TATTATGAAATCTA GTA TAGATTTCAT-ATA TTTTATTTTTCATAA TERM 311 353592 - 353566 - g 70 -8.2 -3.20345 | opp_overlap 353564 353567, overlap 353564 353567 353569 353574 AATTTGACATTAATA TTATGAAATCTA GTA TAGATTTCATAT ATTTTATTTTTCATA TERM 312 353591 - 353567 - g 89 -11.7 -2.51725 | opp_overlap 353564 353567, overlap 353566 353564 353569 353574 ATTTGACATTAATAT TATGAAATCTA GTA TAGATTTCATA TATTTTATTTTTCAT TERM 313 353567 - 353591 + G 100 -11.7 -4.26857 | opp_overlap 353567 353566 353564 353569 353574, overlap 353564 ATTTGACATTAATAT TATGAAATCTA GTA TAGATTTCATA TATTTTATTTTTCAT TERM 314 353589 - 353569 - g 76 -9.9 -2.79321 | opp_overlap 353567 353564, overlap 353567 353566 353564 353574 TTGACATTAATATTA TGAAATCTA GTA TAGATTTCA TATATTTTATTTTTC ubiF 352518 - 353711 + | putative monooxygenase TERM 315 354375 - 354335 - T 100 -15.9 -3.10612 | opp_overlap 354339 354340, overlap 354339 TTCAATTCTAATATA TGAATTATATACACTATAT ATT ATATAGTGTATATAATTCC ATTAACAATAGTTTT TERM 316 354371 - 354339 - T 100 -15.3 -3.37761 | opp_overlap 354339 354340, overlap 354335 ATTCTAATATATGAA TTATATACACTATAT ATT ATATAGTGTATATAA TTCCATTAACAATAG TERM 317 354339 - 354371 + T 100 -15.3 -3.17723 | opp_overlap 354335 354339, overlap 354340 ATTCTAATATATGAA TTATATACACTATAT ATT ATATAGTGTATATAA TTCCATTAACAATAG nagA 355509 - 354355 - | N-acetylglucosamine-6-phosphate deacetylase TERM 318 355393 - 355427 + g 100 -14.6 -2.9294 | opp_overlap 355393 355397, overlap 355397 ATACGTTTTTATATA TAAAGGCAATTCATTT AAT GGATGAATTGCCTTTA TATATCCATCATCTA TERM 319 355427 - 355393 - G 100 -13.2 -2.87683 | opp_overlap 355393 355397, overlap 355397 ATACGTTTTTATATA TAAAGGCAATTCAT TTAATGG ATGAATTGCCTTTA TATATCCATCATCTA TERM 320 355423 - 355397 - G 91 -9.6 -4.12532 | opp_overlap 355393 355397, overlap 355393 GTTTTTATATATAAA GGCAATTCAT TTAATGG ATGAATTGCC TTTATATATCCATCA TERM 321 355397 - 355423 + g 100 -11 -4.1399 | opp_overlap 355397 355393, overlap 355393 GTTTTTATATATAAA GGCAATTCATTT AAT GGATGAATTGCC TTTATATATCCATCA nagB 356327 - 355524 - | glucosamine-6-phosphate deaminase TERM 322 355823 - 355812 - G 71 -3 -5.32944 | overlap 355804 TTTATAACTAAAAAA TCTA GCAT TAGA TAACCGAGTCTCTCT TERM 323 356938 - 356966 + G 79 -10.5 -3.03771 | opp_overlap 356933 ATCCAAAAAGGTCTA GCATATGTAGATG AAT TATCTATATATGC TATTCGAGAATATCG TERM 324 358245 - 358228 - g 73 -5.7 -4.56883 | opp_overlap 358228, overlap 358229 358230 358233 GTAACATTAAAGAAA TCTAATA AATC TATTAGA TTTATTAAGCCACAA TERM 325 358253 - 358229 - g 72 -8.1 -3.33045 | opp_overlap 358228, overlap 358228 358230 358233 TAACATTAAAGAAAT CTAATAAATCT ATT AGATTTATTAA GCCACAATAAATATT TERM 326 358252 - 358230 - g 73 -9.4 -2.58743 | opp_overlap 358228, overlap 358228 358229 358233 AACATTAAAGAAATC TAATAAATCT ATT AGATTTATTA AGCCACAATAAATAT glnS 356593 - 358263 + | glutaminyl-tRNA synthetase fldA 358897 - 358370 - | flavodoxin FldA pgm 359724 - 361370 + | phosphoglucomutase TERM 327 361630 - 361601 - f 76 -6.1 -5.00846 | gap 1, opp_overlap 361607 361609, overlap 361607 TAAATATTATAAAAA TACATATATTAATT ATT AATTAATAT-TGTA AAATGCATTTTTTAT sdhC 362199 - 362594 + | succinate dehydrogenase cytochrome b-556 subunit sdhD 362582 - 362929 + | succinate dehydrogenase hydrophobic membrane anchor protein sdhA 362932 - 364740 + | succinate dehydrogenase flavoprotein subunit sdhB 364754 - 365482 + | succinate dehydrogenase iron-sulfur subunit TERM 328 365685 - 365709 + G 83 -3 -5.75945 | opp_overlap 365679 365686 365702 365704 365706, overlap 365686 AACTAAAAATAATCA ATCATATATT GATCA AATATATGAA TTTTTTTTAAAAAAT TERM 329 365686 - 365708 + G 70 -6.5 -4.04482 | opp_overlap 365679 365686 365702 365704 365706, overlap 365685 ACTAAAAATAATCAA TCATATATT GATCA AATATATGA ATTTTTTTTAAAAAA TERM 330 366895 - 366915 + G 76 -9.9 -2.82987 | opp_overlap 366895 366900, overlap 366900 ATTGGTTTTACTACA TCTAATATC GAT GATATTAGA TCTACTCCATATTGC TERM 331 366915 - 366895 - g 76 -9.9 -2.78463 | opp_overlap 366895 366900, overlap 366900 ATTGGTTTTACTACA TCTAATATC GAT GATATTAGA TCTACTCCATATTGC TERM 332 368448 - 368460 + G 77 -7.7 -4.04397 | overlap 368437 GGATGAAGCTGCTGC TCCTG CTT CAGGA TATTTTTCTCAACAT kgd 365626 - 368538 + | alpha-ketoglutarate decarboxylase TERM 333 368895 - 368881 - g 71 -7.2 -3.76383 | AAAAATCGAAGATAA TCTTGT TAT ACAAGA AGAAGATAAGCATTC sucB 368546 - 369862 + | dihydrolipoamide succinyltransferase component (E2) sucC 369959 - 371158 + | succinyl-CoA synthetase beta chain sucD 371161 - 372051 + | succinyl-CoA synthetase alpha chain TERM 334 372066 - 372091 + F 83 -9.9 -3.82865 | opp_overlap 372066 372065 372069, overlap 372069 ATTCAGTAAATATAT GAACATGTGTA TAAA TATACATGTTC TTTAAATATTGTTTA TERM 335 372430 - 372416 - gf 86 -2.9 -6.14618 | CATAAAATAAAAAAA TGTTT ATCAG AAACA ATAGCCAGTAGAACA tolQ 372131 - 372880 + | TolQ protein tolR 372843 - 373271 + | tolR protein TERM 336 373394 - 373409 + G 80 -6.2 -4.86621 | TATAATGATTTTTTT CTGTTT ATAT AAACAG TTTTTACTTCAAAAT tolA 373293 - 374597 + | tolA protein TERM 337 375689 - 375659 - g 81 -8.4 -4.31608 | opp_overlap 375662 AATAAATATAAATAA TAACCGTGATAGTC ACA GAATATCATGGTTA AATGGAAGCAATCAA tolB 374679 - 376061 + | tolB protein precursor pal 376113 - 376637 + | peptidoglycan-associated lipoprotein precursor ybgF 376643 - 377443 + | hypothetical protein ybhE 378604 - 377588 - | 6-phosphogluconolactonase TERM 338 379297 - 379275 - g 75 -9.4 -2.8939 | opp_overlap 379273 379275 379278 379281, overlap 379272 379278 379281 AGAACCAAAAATTTA CAATAATAAT TGT ATTATTATTG TTGCTCATGGAAATT TERM 339 379275 - 379297 + G 76 -9.4 -3.21595 | opp_overlap 379272 379275 379278 379281, overlap 379273 379278 379281 AGAACCAAAAATTTA CAATAATAAT TGT ATTATTATTG TTGCTCATGGAAATT gpmA 378754 - 379452 + | phosphoglycerate mutase 1 ybhL 379588 - 380298 + | putative permease ychF 381457 - 380411 - | translation-associated GTPase pth 382176 - 381583 - | peptidyl-tRNA hydrolase TERM 340 382263 - 382294 + r 87 -8.4 -4.57503 | gap 1, overlap 382265 ATTATCATTATTACG TA-TGTATATGTTAT TAT ATAACATATACATTA TTTATTATTGTATTA TERM 341 382265 - 382291 + r 100 -12.6 -4.35992 | overlap 382263 TATCATTATTACGTA TGTATATGTTAT TAT ATAACATATACA TTATTTATTATTGTA prsA 383272 - 382328 - | ribose-phosphate pyrophosphokinase TERM 342 382440 - 382417 - G 74 -6.8 -4.23007 | opp_overlap 382417 CAGATAATGTTAAAA TCCGTATATT AGGT AATGTACGGA TTTTTGATTTTAATG TERM 343 382417 - 382440 + g 100 -9 -5.1166 | opp_overlap 382417 CAGATAATGTTAAAA TCCGTATATT AGGT AATGTACGGA TTTTTGATTTTAATG ipk 384036 - 383269 - | isopentenyl monophosphate kinase prfA 384855 - 385931 + | peptide chain release factor 1 hemK 385928 - 386773 + | putative protoporphyrinogen oxidase TERM 344 386811 - 386783 - f 70 -8.5 -2.69725 | opp_overlap 386783 386784 386786 386789, overlap 386782 386789 386804 TCTTAAAAATAAATT CTATAATATTTTA AAA TAAAATATTATAA TTATAATAAAATTAA TERM 345 386784 - 386810 + F 78 -9.8 -2.65223 | opp_overlap 386783 386782 386789 386804, overlap 386783 386786 386789 CTTAAAAATAAATTC TATAATATTTTA AAA TAAAATATTATA ATTATAATAAAATTA TERM 346 387093 - 387071 - g 75 -5.8 -4.78149 | opp_overlap 387076 TCTATAACTCAAAAA TTAAATATAC CTT ATATATTTAA AGCGTCATTTGATAA TERM 347 387478 - 387494 + G 73 -9.5 -2.60615 | opp_overlap 387469, overlap 387477 AGTAGACATTTTAGG GTTGCAT AAA ATGCAAC ATGTTTCAAAAGGGT TERM 348 387733 - 387711 - g 70 -8.6 -2.55668 | overlap 387710 TACCTTTATATCAAC TACCTTGTTT TTT AAACAAGATA AAATTACTCGACACA kdsA 386930 - 387766 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 349 389650 - 389640 - g 76 -2.6 -5.58074 | overlap 389648 GAACTAGCAAAAAAA TTAT CTA ATAA AAATTTTAGAGTAAA TERM 350 389666 - 389654 - g 70 -3.5 -5.11063 | overlap 389648 ATTATCTAATAAAAA TTTTA GAG TAAAA ATAGATTTAAGAAAT thrS 388653 - 389885 + | threonyl-tRNA synthetase TERM 351 389930 - 389908 - f 100 -13.6 -4.86773 | TAAAATTAGTAAAAA GATGCAATCT TTC AGATTGCATC GAATCAATAGAGAAA infC 389909 - 390436 + | translation initiation factor IF-3 rpmI 390531 - 390728 + | 50S ribosomal protein L35 rplT 390826 - 391182 + | 50S ribosomal protein L20 TERM 352 391435 - 391425 - g 85 -2.6 -5.96521 | AGCAATTAAAAAAAA TAAA CTC TTTA AATTGGGACAATAAA TERM 353 391970 - 391989 + G 74 -3 -5.40072 | overlap 391959 AATTTAAAAAAAATT TTATATGA TTTT TTATATAA TTTTTTTGGAAAGAA pheS 391286 - 392293 + | phenylalanyl-tRNA synthetase alpha chain TERM 354 392753 - 392771 + G 72 -5.2 -4.7153 | overlap 392754 392756 392767 TAGAATTACCTATCG ATGCACCC ATT GGGTGTAA TTTTTACGATTATTT TERM 355 392754 - 392770 + G 76 -8.7 -3.41291 | overlap 392753 392756 392767 AGAATTACCTATCGA TGCACCC ATT GGGTGTA ATTTTTACGATTATT TERM 356 392756 - 392768 + G 78 -9.1 -3.26237 | overlap 392754 392753 392767 AATTACCTATCGATG CACCC ATT GGGTG TAATTTTTACGATTA TERM 357 393169 - 393159 - g 70 -4 -4.98758 | AAAAATTGATAAAAA CATA ATA TATG TACGATTTTCCAAAC TERM 358 394576 - 394553 - g 81 -9.8 -3.38191 | opp_overlap 394553 394557, overlap 394557 AAAAAATTGGCATAA TTAACTTAAC TGAA GTTAAGTTAA TTGATGTATATACAG TERM 359 394553 - 394576 + G 80 -9.8 -3.35197 | opp_overlap 394553 394557, overlap 394557 AAAAAATTGGCATAA TTAACTTAAC TGAA GTTAAGTTAA TTGATGTATATACAG pheT 392329 - 394740 + | phenylalanyl-tRNA synthetase beta chain lplA 394844 - 395857 + | lipoate-protein ligase A TERM 360 395995 - 395970 - f 91 -12.1 -2.87654 | opp_overlap 395972 395974, overlap 395967 395972 395974 AATAAGCTATAATTA TATACCTAACT CGGT AGTTAGGTATA ATATAAACATTAAAA TERM 361 395972 - 395993 + F 80 -10.3 -2.63631 | opp_overlap 395970 395967 395972 395974, overlap 395974 TAAGCTATAATTATA TACCTAACT CGGT AGTTAGGTA TAATATAAACATTAA TERM 362 395993 - 395972 - f 81 -10.3 -2.9796 | opp_overlap 395972 395974, overlap 395970 395967 395974 TAAGCTATAATTATA TACCTAACT CGGT AGTTAGGTA TAATATAAACATTAA TERM 363 395991 - 395974 - f 72 -8.5 -3.03741 | opp_overlap 395972 395974, overlap 395972 395970 395967 AGCTATAATTATATA CCTAACT CGGT AGTTAGG TATAATATAAACATT TERM 364 395974 - 395991 + F 71 -8.5 -2.85847 | opp_overlap 395974 395972 395970 395967, overlap 395972 AGCTATAATTATATA CCTAACT CGGT AGTTAGG TATAATATAAACATT sufA 396027 - 396410 + | HesB-like domain TERM 365 396994 - 397010 + G 74 -2.3 -5.5943 | overlap 396985 396995 TACTTAGGTACAGTG GTATCTT ATA AAGATAA TTTTTTTGCTGCTTT TERM 366 397305 - 397334 + G 73 -5.9 -4.63218 | gap 1, opp_overlap 397305 TTGGTTTTCAGGACA TTCAAAAAACTCTC AGG GAG-GTATTTTGAA TTTTGTTACAAAAAG TERM 367 397904 - 397890 - g 73 -5.8 -4.58466 | opp_overlap 397890, overlap 397885 TGTAGAAGCACAAAA GTTATT AGA AATAAC TTTAGAACATAGTGT sufB 396424 - 397926 + | cysteine desulfurase activator complex subunit SufB sufC 397993 - 398730 + | ATP-dependent transporter sufC TERM 368 398814 - 398803 - g 88 -3 -6.07627 | ATTTTCAAAAAAAAA CAAT AATT ATTG GGAACAAAATATAAT sufD 398714 - 400015 + | cysteine desulfurase activator complex subunit SufD sufS 400012 - 401247 + | selenocysteine lyase TERM 369 401371 - 401392 + G 74 -8.1 -3.55203 | opp_overlap 401371, overlap 401372 CCTATATATTATAGA TCTTGGTAA ATTA TTACCAAGG TTTCCAGAAGATTTT TERM 370 401372 - 401391 + G 73 -9.4 -2.7264 | opp_overlap 401371, overlap 401371 CTATATATTATAGAT CTTGGTAA ATTA TTACCAAG GTTTCCAGAAGATTT ynhA 401291 - 401722 + | hypothetical protein TERM 371 401799 - 401742 - T 100 -39.1 -4.09187 | opp_overlap 401742 401752, overlap 401739 ATAAAATAAATAGAA TCTAACACAATACTCCCGCCACTCAAT ATTT ATTGAGTGGCGGGAGTATTGTGTTAGA TTCTAAAAATAAATA TERM 372 401742 - 401799 + T 100 -39.1 -3.31461 | opp_overlap 401739 401742, overlap 401752 ATAAAATAAATAGAA TCTAACACAATACTCCCGCCACTCAAT ATTT ATTGAGTGGCGGGAGTATTGTGTTAGA TTCTAAAAATAAATA TERM 373 401752 - 401789 + T 100 -25.9 -3.72757 | opp_overlap 401739 401742, overlap 401742 TAGAATCTAACACAA TACTCCCGCCACTCAAT ATTT ATTGAGTGGCGGGAGTA TTGTGTTAGATTCTA lpp 402058 - 401822 - | major outer membrane lipoprotein ribE 402614 - 403222 + | riboflavin synthase subunit alpha ydhD 403359 - 403694 + | hypothetical protein TERM 374 403743 - 403718 - T 83 -10.5 -3.42699 | opp_overlap 403718 ATTTATTTATGATAA CCTTCGTTGTT TGTA ATCAACGAAGG TTTCCATGGCCATCC TERM 375 403718 - 403743 + T 83 -10.5 -3.65351 | opp_overlap 403718 ATTTATTTATGATAA CCTTCGTTGTT TGTA ATCAACGAAGG TTTCCATGGCCATCC rnt 404376 - 403705 - | ribonuclease T TERM 376 403822 - 403840 + g 80 -6.1 -4.8667 | opp_overlap 403822 TTTTTCAGCATCATA TAAAGCA GAATG TGCTTTA TTTTTATCAAATATA slyA 404931 - 405365 + | transcriptional regulator SlyA pdxH 405628 - 406272 + | pyridoxamine 5'-phosphate oxidase tyrS 406416 - 407684 + | tyrosyl-tRNA synthetase TERM 377 407735 - 407678 - T 100 -30.7 -3.19192 | opp_overlap 407678 407685, overlap 407685 CCTTATTCAATGGAA CATATAAGTATTGATAATGGATTGTTT ATAT AAACAATCCATTATCAATACTTATATG TTCCATTTTTTATCA TERM 378 407678 - 407735 + T 100 -30.7 -3.55457 | opp_overlap 407678 407685, overlap 407685 CCTTATTCAATGGAA CATATAAGTATTGATAATGGATTGTTT ATAT AAACAATCCATTATCAATACTTATATG TTCCATTTTTTATCA TERM 379 407685 - 407728 + T 100 -23 -3.71156 | opp_overlap 407678 407685, overlap 407678 CAATGGAACATATAA GTATTGATAATGGATTGTTT ATAT AAACAATCCATTATCAATAC TTATATGTTCCATTT TERM 380 407728 - 407685 - T 100 -23 -3.70553 | opp_overlap 407685 407678, overlap 407678 CAATGGAACATATAA GTATTGATAATGGATTGTTT ATAT AAACAATCCATTATCAATAC TTATATGTTCCATTT nth 408370 - 407729 - | endonuclease III fumC 409803 - 408457 - | fumarate hydratase TERM 381 408641 - 408651 + g 70 -4 -4.85195 | opp_overlap 408641 ACTAACATTAAAGAT TTGT TTA ACAA TTTTTCAATTCTTTT TERM 382 411980 - 411947 - g 72 -9 -2.92668 | opp_overlap 411945, overlap 411942 TATTACTCAATCACA GTCATCTATTGATG AATCTA CAACAACAGATGAC AGTTAATATAATATA eaeH 409944 - 411986 + | putative adhesin TERM 383 412045 - 412092 + T 100 -26.2 -3.14463 | opp_overlap 412045 412049 412058, overlap 412049 412058 AATCTTGGCTAGGAA TAAATCAACAAAACCATTGTGA TTAA TCACAATGGTTTTGTTGATTTA TTCCTAGCCAAGATT TERM 384 412092 - 412045 - T 100 -26.2 -3.14463 | opp_overlap 412045 412049 412058, overlap 412049 412058 AATCTTGGCTAGGAA TAAATCAACAAAACCATTGTGA TTAA TCACAATGGTTTTGTTGATTTA TTCCTAGCCAAGATT TERM 385 412049 - 412088 + T 100 -22.6 -4.24342 | opp_overlap 412045 412049 412058, overlap 412045 412058 TTGGCTAGGAATAAA TCAACAAAACCATTGTGA TTAA TCACAATGGTTTTGTTGA TTTATTCCTAGCCAA TERM 386 412088 - 412049 - T 100 -22.6 -4.24342 | opp_overlap 412049 412045 412058, overlap 412045 412058 TTGGCTAGGAATAAA TCAACAAAACCATTGTGA TTAA TCACAATGGTTTTGTTGA TTTATTCCTAGCCAA TERM 387 412058 - 412079 + T 100 -11.7 -4.88407 | opp_overlap 412049 412045 412058, overlap 412049 412045 AATAAATCAACAAAA CCATTGTGA TTAA TCACAATGG TTTTGTTGATTTATT TERM 388 412079 - 412058 - T 100 -11.7 -4.88407 | opp_overlap 412058 412049 412045, overlap 412049 412045 AATAAATCAACAAAA CCATTGTGA TTAA TCACAATGG TTTTGTTGATTTATT ubiX 412666 - 412067 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase kdsB 413506 - 412730 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 389 413161 - 413146 - G 78 -6.2 -4.81551 | TAGTCATATTAAAAA CATCAA CTAT TTGATG AATCATATATGATGA ycaR 413688 - 413503 - | hypothetical protein TERM 390 413529 - 413545 + g 70 -3.8 -5.14965 | CTATAATTTTGCAAT TCAAAT ATCGA ATTTGA TTTTTTAATAAAACT lpxK 414751 - 413750 - | tetraacyldisaccharide 4'-kinase msbA 416502 - 414751 - | lipid transporter ATP-binding/permease protein TERM 391 414984 - 414968 - G 81 -9.5 -3.68827 | GATTCAGTATCCAAA GATGAAG TAG CTTCATC TAAAATTAAAATAGG TERM 392 416642 - 416626 - R 76 -6.7 -4.6391 | opp_overlap 416626 AACAATGATACAAAA TTTTGAT GGT ATCAAAA TTACATTTAAATTTT TERM 393 416845 - 416863 + r 71 -4.7 -5.08824 | opp_overlap 416831 416829 416848, overlap 416831 416829 416827 TTTCTATTATTTTAA TAATAGA ATATA TCTATTA TTTTTTAACTACCAA TERM 394 416923 - 416951 + r 85 -7.7 -5.09225 | opp_overlap 416922 416921 416929 416940, overlap 416925 ATTCTAAAAAAACTT CACATATTAATAT ACT ATATTAATATGTA TTTTTTAAATAAAAT TERM 395 416925 - 416949 + r 87 -10.3 -4.17608 | opp_overlap 416922 416921 416929 416940, overlap 416923 TCTAAAAAAACTTCA CATATTAATAT ACT ATATTAATATG TATTTTTTAAATAAA rpsA 418705 - 416978 - | 30S ribosomal protein S1 TERM 396 418617 - 418600 - G 79 -7.1 -4.45544 | CTGCATCAACTAAAA CTATTTC TTTA GAAATAG CTATCACCACTCCTT TERM 397 418773 - 418802 + r 100 -13.9 -3.36018 | overlap 418771 GATAGAGTTTATATT TTTTTCATCATCA TCCA TGATGATGAAAAA TCTTATATAATACTT cmk 419514 - 418816 - | cytidylate kinase aroA 420936 - 419635 - | 3-phosphoshikimate 1-carboxyvinyltransferase serC 422155 - 421058 - | phosphoserine aminotransferase serS 423649 - 422339 - | seryl-tRNA synthetase TERM 398 423768 - 423796 + r 100 -13.4 -4.83615 | opp_overlap 423765 423763 423768 423770 AATCTCCAAATATTA TACCGTTATACA ATAAA TGTATAACGGTA TTTTTCTCAAAACTC TERM 399 423796 - 423768 - R 91 -13.4 -2.85069 | opp_overlap 423768, overlap 423765 423763 423770 AATCTCCAAATATTA TACCGTTATACA ATAAA TGTATAACGGTA TTTTTCTCAAAACTC TERM 400 423794 - 423770 - R 91 -11.6 -2.97021 | opp_overlap 423768, overlap 423768 423765 423763 TCTCCAAATATTATA CCGTTATACA ATAAA TGTATAACGG TATTTTTCTCAAAAC lolA 424784 - 424152 - | outer membrane lipoprotein carrier protein precursor TERM 401 424232 - 424262 + g 71 -7.1 -3.74488 | opp_overlap 424232 GATTAATTAAATTTA CACATTGATTA GATAAATAA TAATCAATGTG TTGCTTATTTTCTTG ftsK 427235 - 424881 - | cell division protein FtsK TERM 402 426789 - 426775 - G 80 -2.2 -5.73672 | overlap 426737 AAATAATTAAAAAAA TATATA CCA CATATA ATTCCAACAAATAAT TERM 403 427413 - 427388 - H 85 -7.9 -4.97957 | opp_overlap 427388 427391, overlap 427380 427404 TACATAATAATAAAA TAATTATTAAA TGAA TTTAATAATTA TTAATGAACATATAA trxB 427554 - 428525 + | thioredoxin reductase infA 428649 - 428867 + | initiation factor IF-1 oprC 431104 - 428942 - | outer membrane protein OprC TERM 404 429108 - 429076 - G 73 -9.4 -2.5166 | gap 1, opp_overlap 429075 429076, overlap 429075 429073 GATTAAACAAATTAT CTACCCCAATATTAC ATGT GTAATATTGGGA-AG CTTTCCAAGACATAT TERM 405 430134 - 430152 + g 71 -9 -2.86164 | opp_overlap 430131 ACGGGTATAGTATTA TTCATCAT AAT ATGATGAA TATGATGATTCCAAA yqeI 431534 - 432172 + | hypothetical protein mltE 433207 - 432452 - | membrane-bound lytic murein transglycosylase E TERM 406 432807 - 432817 + g 72 -6.8 -4.10672 | TATGCATCCTTACCA GCAG TAT CTGC TTTAATTTGCATTAA TERM 407 433920 - 433945 + G 71 -5.5 -4.42386 | overlap 433922 AAACATTTTTTGGAT TTTGCTCTTGA AGAT TTAGGAGCAGA TTTTATAGCTACAGG TERM 408 434011 - 433999 - g 70 -4.1 -4.96435 | overlap 434000 TTAAGAAAAAAATAA CCCTT ATG AAAGG AATAGATCAAAATAA trmU 433593 - 434702 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 409 435766 - 435781 + G 76 -6.2 -4.52669 | opp_overlap 435766 ATTAAATTTAATCAA GATATC TGGG GATATC TTTCTTTAAATTATT TERM 410 435962 - 435928 - g 70 -3.6 -5.0133 | opp_overlap 435937, overlap 435935 435937 CATTTTTCTAAAAAA TTACCAATATCACGTT GGC AACGTGATTTAAGTGA CTCCACCGTACTAAG TERM 411 435953 - 435937 - g 78 -9.5 -3.27622 | opp_overlap 435937, overlap 435935 435928 AAAAAATTACCAATA TCACGTT GGC AACGTGA TTTAAGTGACTCCAC TERM 412 435937 - 435953 + G 81 -9.5 -3.6682 | opp_overlap 435935 435928 435937 AAAAAATTACCAATA TCACGTT GGC AACGTGA TTTAAGTGACTCCAC TERM 413 436157 - 436137 - g 79 -7.7 -4.22231 | overlap 436134 AATGAAAAAATACAA CATTCATAA TTC TTATGAACG TACGAAAGATTTTAT purB 434941 - 436326 + | adenylosuccinate lyase lolE 437679 - 436429 - | ABC transporter integral membrane subunit TERM 414 436589 - 436575 - G 85 -7.2 -4.91657 | opp_overlap 436575 436573 AATCAATAAAATAAA TTTCTC TAG GAGAAA TATTAATTTCAAAAA lolD 438413 - 437706 - | ABC transporter ATP-binding subunit TERM 415 438102 - 438091 - G 75 -4.4 -5.28983 | overlap 438083 TCTAAAACAGAAAAA TCTG GTAA CAGA TGATGAAATTGATAT ycfU 439620 - 438403 - | ABC transporter integral membrane subunit TERM 416 438603 - 438561 - G 71 -3 -5.25803 | overlap 438563 AATTTTCAGAAAAAA TATTTAGCAAAAATAATA TTTGGTT TAGTTTTTTTGCTAAACA TACTCCTAACCCCAC TERM 417 439329 - 439345 + g 82 -5.3 -5.45652 | AAAAAATCAAAGGCT TAATATA TGT TATATTA TTTTTTATTGCAGGT ycfM 440303 - 439737 - | putative lipoprotein TERM 418 439901 - 439882 - G 76 -8 -3.90744 | opp_overlap 439874 TCCGCCTGTAAATAA TTTGCTAT TTTC ATAGCAAA CTCATAAGCATGTTC ycfF 440895 - 440539 - | putative protein kinase C inhibitor ycfH 441781 - 441002 - | putative deoxyribonuclease holB 442801 - 441800 - | DNA polymerase III, delta prime subunit TERM 419 442734 - 442724 - G 72 -6.8 -4.06864 | opp_overlap 442724 442723 GCTATATAACAATAA GGCA TGA TGCC CTTTCTTAATATCAT tmk 443448 - 442813 - | thymidylate kinase pabC 444440 - 443622 - | 4-amino-4-deoxychorismate lyase acpP 444803 - 444567 - | acyl carrier protein fabG 445674 - 444940 - | 3-oxoacyl-[acyl-carrier protein] reductase fabD 446678 - 445713 - | malonyl CoA-acyl carrier protein transacylase fabH 447663 - 446707 - | 3-oxoacyl-(acyl carrier protein) synthase III plsX 448709 - 447675 - | putative glycerol-3-phosphate acyltransferase PlsX rpmF 448900 - 448730 - | 50S ribosomal protein L32 TERM 420 448867 - 448883 + g 71 -4.5 -4.81212 | GTCTCATACCTCTTT TAGATCT AGT AGATTTA TTTTGTTGTACTGCC TERM 421 449000 - 449044 + r 100 -19.3 -3.47227 | opp_overlap 449000 449004, overlap 449004 TAACATAACACCAAA TAAATAATTACAATATATATT TAT AATATATATTGTAATTATTTA TTGTCATCGTTAACC TERM 422 449044 - 449000 - R 100 -19.3 -4.00882 | opp_overlap 449000 449004, overlap 449004 TAACATAACACCAAA TAAATAATTACAATATATATT TAT AATATATATTGTAATTATTTA TTGTCATCGTTAACC TERM 423 449004 - 449040 + r 100 -15.7 -4.37157 | opp_overlap 449000 449004, overlap 449000 ATAACACCAAATAAA TAATTACAATATATATT TAT AATATATATTGTAATTA TTTATTGTCATCGTT TERM 424 449040 - 449004 - R 100 -15.7 -4.57787 | opp_overlap 449004 449000, overlap 449000 ATAACACCAAATAAA TAATTACAATATATATT TAT AATATATATTGTAATTA TTTATTGTCATCGTT TERM 425 449298 - 449351 + r 93 -12.4 -3.20712 | opp_overlap 449298 449303, overlap 449303 449313 CTGGCTGATATATCA TCAAATATTTACTATTAATAAATA CTTTAT TATTTGTTAATAGTAAATATTTAA TTAACTAATTTTCTT TERM 426 449351 - 449298 - R 91 -12.4 -2.69151 | opp_overlap 449298 449303 449313, overlap 449303 CTGGCTGATATATCA TCAAATATTTACTATTAATAAATA CTTTAT TATTTGTTAATAGTAAATATTTAA TTAACTAATTTTCTT TERM 427 449303 - 449346 + r 100 -12.3 -3.94404 | opp_overlap 449298 449303, overlap 449298 449313 TGATATATCATCAAA TATTTACTATTAATAAATA CTTTAT TATTTGTTAATAGTAAATA TTTAATTAACTAATT TERM 428 449346 - 449303 - R 83 -10.1 -3.83409 | opp_overlap 449303 449298 449313, overlap 449298 TGATATATCATCAAA TATTTACTATTAATAAATA CTTTAT TATTTGTTAATAGTAAATA TTTAATTAACTAATT rluC 450316 - 449348 - | ribosomal large subunit pseudouridine synthase C TERM 429 451155 - 451138 - g 71 -5.6 -4.39407 | overlap 451131 CCAAATAATCCAAAA TCTGGA GGAATT TCCAGA CGTATTGAAGGTAAT TERM 430 451840 - 451817 - g 77 -8.2 -3.78026 | overlap 451815 GCGAAATTGAAAATA CTTTACGTAC AACA GTACGTCAAG ATAGAGCTCGCATTC TERM 431 452049 - 452037 - g 75 -4.9 -5.14626 | AGCATTAAAAGAAAA TACTT ATG AAGTA CATGCAATTGTTCCT TERM 432 452064 - 452079 + G 72 -7.6 -3.70307 | ACATGCAATTGTTCC TGTAGC TATT GCTACA TATTTATTAAATGAA TERM 433 452338 - 452323 - g 77 -4.8 -5.24531 | opp_overlap 452323 ATTGTGCATAAAAAA TTGTTT AATA AAACAA AATTTTTATATTTTC TERM 434 452431 - 452416 - g 83 -3.2 -5.79588 | overlap 452423 CTAAAATTAAAAAAA GTAACC ATAT GGATAC ATAAAATTACTAATT TERM 435 452517 - 452507 - g 72 -4 -5.10004 | overlap 452500 AAAAACAATTAAAAA CTTT AAA AAAG AATAATATTTTTAAA rne 450736 - 452868 + | ribonuclease E TERM 436 453007 - 453032 + F 74 -7.9 -3.56758 | opp_overlap 453009 453013, overlap 453013 GATATGTTTCTACAC TATAAATAATT TATC AATTATTTATA TATTTAATATTCATT htrB 453267 - 454193 + | lipid A biosynthesis lauroyl acyltransferase pgsA 456443 - 455871 - | phosphotidylglycerophosphate synthetase TERM 437 456881 - 456859 - H 95 -13.6 -3.11634 | TCCTACACGACCCAA TGCCGTTATA GGA TATAACGGCA AAAATATATACTCCC TERM 438 457155 - 457122 - H 72 -3.5 -5.57396 | gap 1, opp_overlap 457125 457132, overlap 457124 457126 ATAATTAATAAAAAA TACATATCAATATACA CTA TATATATTGATAC-TA CTCTATAATCAAGAT TERM 439 457152 - 457126 - H 80 -9 -3.77157 | opp_overlap 457125 457132, overlap 457124 457122 TTAATAAAAAATACA TATCAATATACA CTA TATATATTGATA CTACTCTATAATCAA yccK 457230 - 457559 + | putative sulfite reductase yccV 457762 - 458079 + | hypothetical protein TERM 440 458538 - 458519 - g 71 -2.1 -5.42259 | gap 1, overlap 458522 TTATTTGGAAAAAAA GGA-CCGG TTCTT CCAGCTCC TAATATGTTAATGAT fabA 458444 - 458962 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 441 460267 - 460289 + G 100 -12.2 -3.73224 | opp_overlap 460267 TCACAACGAGAAGAA CGTTTATCTA TAT TAGATAAACG TTTACTAGAAAATAA TERM 442 460289 - 460267 - g 100 -12.2 -3.91357 | opp_overlap 460267 TCACAACGAGAAGAA CGTTTATCTA TAT TAGATAAACG TTTACTAGAAAATAA asnC 459061 - 460473 + | asparaginyl-tRNA synthetase TERM 443 461569 - 461556 - g 76 -3.9 -5.43514 | overlap 461565 461568 AAAAGAATTAAAAAA TATGA GAGA TCATA TTAAAAATATGCGTA aspC 460603 - 461823 + | aromatic amino acid aminotransferase TERM 444 461868 - 461827 - T 100 -26.3 -4.72846 | opp_overlap 461827 TTATACATTTAAAAA GAACCGCCAAATATGCTTT ATCT AAAGCATATTTGGCGGTTC TTTTTAAATGTCAAA TERM 445 461827 - 461868 + T 100 -26.3 -4.70659 | opp_overlap 461827 TTATACATTTAAAAA GAACCGCCAAATATGCTTT ATCT AAAGCATATTTGGCGGTTC TTTTTAAATGTCAAA ycbL 462523 - 461888 - | hypothetical protein fabI 463402 - 462617 - | enoyl-[acyl-carrier-protein] reductase (NADH) ribA 464182 - 464781 + | GTP cyclohydrolase II trpE 465508 - 467073 + | anthranilate synthase component I trpG 467081 - 467662 + | anthranilate synthase component II trpD 467677 - 468699 + | anthranilate phosphoribosyltransferase TERM 446 468891 - 468906 + G 80 -9 -3.75738 | GAATACAAACCTGCT TCCCCT TCCA AGGGGA TTATTCATCATAATC TERM 447 469696 - 469672 - g 73 -3.7 -5.26875 | TTTGTAATGAAAAAA TTTACAATATC ATT AATATAGTAAA AACATTAAATTTATC trpC 468711 - 470087 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 448 470233 - 470217 - g 85 -8.1 -4.58563 | CAATTAGAAAAAGAA TTCATAG AAG CTATGAA AGATATAAGTTTTCA trpB 470124 - 471320 + | tryptophan synthase subunit beta trpA 471317 - 472132 + | tryptophan synthase subunit alpha tonB 473616 - 472837 - | TonB protein TERM 449 473792 - 473812 + H 74 -7.1 -4.21812 | opp_overlap 473790 473788 ATAAAAAAATTTATA TTTATATAT GCA ATATATAAA TTATTTTAAATAACA TERM 450 474808 - 474822 + G 74 -8.6 -3.25147 | opp_overlap 474807 474798, overlap 474806 474787 GGAAATAGAAACAGG GGAACA TAT TGTTCC TGTATTATCTAGTTC cls 473951 - 475426 + | cardiolipin synthetase tdk 476183 - 475605 - | thymidine kinase TERM 451 477285 - 477299 + G 76 -8.6 -3.38991 | ATTAAGAGCTCATAT GCATCA GCT TGATGC TCTTATTACACAACT xthA 477241 - 478044 + | exonuclease III TERM 452 478147 - 478091 - f 100 -28.9 -3.34522 | opp_overlap 478091, overlap 478122 478125 ATACTGGTCAATTAA TTTAATGTAATCCAATGATTATATTAT GAA ATAATATAATCATTGGATTACATTAAA TTAATTGAAACTAAA TERM 453 478091 - 478147 + F 100 -28.9 -3.34895 | opp_overlap 478091 478122 478125 ATACTGGTCAATTAA TTTAATGTAATCCAATGATTATATTAT GAA ATAATATAATCATTGGATTACATTAAA TTAATTGAAACTAAA sppA 478172 - 480049 + | protease IV, a signal peptide peptidase gapA 480436 - 481437 + | glyceraldehyde 3-phosphate dehydrogenase A TERM 454 481537 - 481580 + F 100 -14.4 -3.52113 | opp_overlap 481542, overlap 481542 AAATAAGTATTATCA AAAAATAATATTAAAAGCAT TAAA ATGCTTTTAATATTATTTTA TATTTATCCAAAAAT TERM 455 481575 - 481542 - f 100 -14.3 -5.19212 | opp_overlap 481537 481542 AGTATTATCAAAAAA TAATATTAAAAGCAT TAAA ATGCTTTTAATATTA TTTTATATTTATCCA TERM 456 481542 - 481575 + F 100 -14.3 -4.84918 | opp_overlap 481542, overlap 481537 AGTATTATCAAAAAA TAATATTAAAAGCAT TAAA ATGCTTTTAATATTA TTTTATATTTATCCA dsbB 481718 - 482242 + | disulfide bond formation protein B minC 482387 - 483103 + | septum site determining protein MinC minD 483114 - 483938 + | septum site determining protein MinD TERM 457 483977 - 483959 - g 77 -7.6 -4.15788 | AATGGTTTTAACAAA TTTTTTTC TGA GAAAAAAA ACATCAACTACAGCA minE 483945 - 484247 + | cell division topological specificity factor yeaZ 484963 - 484301 - | hypothetical protein TERM 458 484846 - 484887 + g 87 -11.1 -3.44593 | opp_overlap 484845 484840, overlap 484843 ACTTATTAATCATAG GCAATATTTTTTCAGCATG ACAC CGTGGTGCAAAAATATTGC TATTATATATATTTT TERM 459 484939 - 484917 - G 95 -11.4 -3.78775 | opp_overlap 484915 484913 TGGTCTATCATTAAA GCTACAGAAC ATA GTTCTGTAAC CGTATTAAATGCTAA TERM 460 485746 - 485735 - g 71 -3 -5.25656 | AAAATCATTAAAAAA CATT TAAA AATG GGTAATTGTTATCAA pabB 485126 - 486511 + | para-aminobenzoate synthase component I TERM 461 486534 - 486518 - T 76 -5.3 -5.28826 | opp_overlap 486520 AAATCTTAGAAAAAA TATATAT ATT ATATATA TCCAATATCATTATT yoaE 488134 - 486575 - | hypothetical protein TERM 462 487202 - 487222 + g 74 -9.1 -2.83715 | opp_overlap 487202 487210 TTTTTGAGAATTTAA CCATGTAAT TTC ATTACGTGG TGTCATAATACTACG manX 488572 - 489561 + | PTS system, mannose-specific IIAB component manY 489677 - 490492 + | phosphotransferase enzyme II, C component manZ 490505 - 491377 + | mannose-specific PTS system protein IID TERM 463 491353 - 491411 + T 100 -20.1 -2.7644 | gap 1, overlap 491354 AATTGGTATATTTGG -ACATTGGTTTGGATTGTTGAGCTGATT ATAT AATCAGCTCAACAATCCAAACCAATAAA ATTTCCACATTAAAT TERM 464 491354 - 491412 + T 95 -11.6 -3.61268 | gap 3, overlap 491353 ATTGGTATATTTGGA ---CATTGGTTTGGATTGTTGAGCTGATT ATAT AATCAGCTCAACAATCCAAACCAATAAAA TTTCCACATTAAATA cspC 491758 - 491549 - | cold shock-like protein CspC TERM 465 492472 - 492442 - R 72 -7.9 -3.47311 | opp_overlap 492441, overlap 492440 AATTATAAAAAATTA CTATAATTTATAC TGTTT ATATAAATTATAG ATCTAATATATTACT zwf 494125 - 492629 - | glucose-6-phosphate 1-dehydrogenase TERM 466 494710 - 494680 - g 76 -2.6 -5.53991 | opp_overlap 494682, overlap 494682 TACTGATCAAAAAAA TACTCTTGAAAAAA TCA TTATTTCAGGAGTT AATATAGTAAGATTA pykA 494615 - 496081 + | pyruvate kinase A yebA 497569 - 496178 - | hypothetical protein aspS 499511 - 497781 - | aspartyl-tRNA synthetase TERM 467 497908 - 497924 + g 75 -7.3 -4.11751 | opp_overlap 497889, overlap 497910 AATGCTATACCAGCA TGTGGAG GAG CTCCATA TTTTAGAGCATTCAT TERM 468 497910 - 497922 + g 72 -7.7 -3.6543 | opp_overlap 497889, overlap 497908 TGCTATACCAGCATG TGGAG GAG CTCCA TATTTTAGAGCATTC TERM 469 500557 - 500547 - g 75 -4 -5.2166 | CAAGAATCTAAAAAA GAAT ATG ATTC TGATCCCAATTTTGC argS 499941 - 501692 + | arginyl-tRNA synthetase mviN 503270 - 501714 - | virulence factor MviN TERM 470 503173 - 503152 - G 100 -8.1 -5.9003 | AAAGCAATAAAAAAA GAATCAGTA ATAG TACTGACTC CAAATACACGTGCTA yceL 503795 - 505000 + | multidrug resistance protein MdtH TERM 471 505883 - 505895 + T 70 -7.7 -3.35278 | GATCATATATAATGT CCTCA TTT TGAGG TTCCTCTGTAGTTCA TERM 472 506075 - 506059 - T 74 -9.5 -2.8055 | opp_overlap 506058 TATTTGATAATACCA TTGCATC TAC GATGCAA ATCATGTACGTTAAT gutQ 507023 - 506043 - | D-arabinose 5-phosphate isomerase TERM 473 506648 - 506632 - G 84 -9.5 -3.76373 | GCTCCAACAGCTAAA GGAGATT GTA AATCTCC AGTTAAAGCAATTAC TERM 474 506976 - 506994 + g 72 -8.2 -3.29541 | overlap 506975 TTCATCGATTTCAAT TGCTAAAG TTT CTTTGGCA TATTGTAATAATAAT TERM 475 507232 - 507217 - R 75 -3.4 -5.80817 | overlap 507220 TTTAATACAAAAAAA TAATTA TTAC TAATTA AATAATAACCGTTCA yeeX 507763 - 507437 - | hypothetical protein TERM 476 509125 - 509113 - g 81 -3.5 -5.56673 | opp_overlap 509113 ATCTACAACAAAAAA TAAAA TCT TTTTA TGTTATTATAGAATC TERM 477 509185 - 509166 - g 81 -5.8 -5.29208 | opp_overlap 509166, overlap 509167 AAAATAAAAAACAAA CTATCTAC TCAT GTAGATAA TCAATTATATAATGG TERM 478 509184 - 509167 - g 71 -7.1 -3.72034 | opp_overlap 509166, overlap 509166 AAATAAAAAACAAAC TATCTAC TCAT GTAGATA ATCAATTATATAATG sbcB 508047 - 509552 + | exonuclease I hisG 509860 - 510759 + | ATP phosphoribosyltransferase hisD 510764 - 512077 + | histidinol dehydrogenase TERM 479 512922 - 512908 - g 70 -5 -4.6759 | opp_overlap 512908 AATATGTTAATAAAA GCATTA AAA CAATGC TCTTGTGTTCAACAA hisC 512074 - 513144 + | histidinol-phosphate aminotransferase hisB 513168 - 514241 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 514238 - 514828 + | imidazole glycerol phosphate synthase subunit HisH TERM 480 515190 - 515174 - gf 76 -3.7 -5.47821 | opp_overlap 515174 ACGCATCCAAAAAAA GTAAAAC AAT GGTTTAC ATATTTTAATCCAAG hisA 514835 - 515590 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 481 516287 - 516272 - gf 85 -4.8 -5.60993 | TTTTTCACAAAAAAA TCATTA AAAT TAATGA ACTAAAAAATTTTTT hisF 515560 - 516336 + | imidazole glycerol phosphate synthase subunit HisF hisI 516330 - 516971 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 482 517054 - 517100 + T 100 -12.6 -4.46112 | opp_overlap 517054 517058 517059, overlap 517059 TGTTTCACTCTAAAA TTAATTCTACAAATGTGCTATT TTT ATTAGCACATTTGTAGATATAA TTTATTTAGATAACC TERM 483 517100 - 517054 - T 100 -12.6 -4.13767 | opp_overlap 517054 517059, overlap 517058 517059 TGTTTCACTCTAAAA TTAATTCTACAAATGTGCTATT TTT ATTAGCACATTTGTAGATATAA TTTATTTAGATAACC TERM 484 517096 - 517058 - T 95 -13.4 -3.68366 | opp_overlap 517054 517059, overlap 517054 517059 TCACTCTAAAATTAA TTCTACAAATGTGCTATT TTT ATTAGCACATTTGTAGAT ATAATTTATTTAGAT TERM 485 517095 - 517059 - T 100 -16.9 -2.80537 | opp_overlap 517054 517059, overlap 517058 517054 CACTCTAAAATTAAT TCTACAAATGTGCTATT TTT ATTAGCACATTTGTAGA TATAATTTATTTAGA TERM 486 517059 - 517095 + T 100 -16.9 -3.14807 | opp_overlap 517059 517058 517054, overlap 517054 CACTCTAAAATTAAT TCTACAAATGTGCTATT TTT ATTAGCACATTTGTAGA TATAATTTATTTAGA gnd 518526 - 517102 - | 6-phosphogluconate dehydrogenase metG 518883 - 520520 + | methionyl-tRNA synthetase folE 521340 - 520675 - | GTP cyclohydrolase I TERM 487 521856 - 521846 - g 70 -4 -4.90906 | CTATAACAGCAAAAA TACA AGA TGTA CAATACCATCCTTAT rplY 521617 - 521928 + | 50S ribosomal protein L25 ddlA 523025 - 521961 - | D-alanine:D-alanine ligase A TERM 488 522524 - 522536 + g 81 -3.5 -5.58179 | opp_overlap 522524 ACATATCTGCAAAAT TTAAA AAT TTTAA TTTTTTCTTCTCATG TERM 489 523111 - 523081 - R 100 -15.8 -5.626 | opp_overlap 523081 TACCCTATAAAAAAA GAAAATCGAATTAT AAA ATAATTCGATTTTC TTTTTTTTGTATAAC TERM 490 523081 - 523111 + r 100 -15.8 -6.02914 | opp_overlap 523081 TACCCTATAAAAAAA GAAAATCGAATTAT AAA ATAATTCGATTTTC TTTTTTTTGTATAAC omp 524270 - 523140 - | outer membrane protein gyrA 527292 - 524704 - | DNA gyrase subunit A ubiG 527499 - 528236 + | 3-demethylubiquinone-9 3-methyltransferase nrdA 528624 - 530909 + | ribonucleotide-diphosphate reductase subunit alpha nrdB 530938 - 532068 + | ribonucleotide-diphosphate reductase subunit beta TERM 491 532105 - 532091 - g 85 -3.6 -5.72616 | overlap 532101 ATTGATACAAAAAAA CCTTAT CAT ATAAAG TATCTTCATGATAAA yfaE 532043 - 532330 + | putative ferredoxin nuoN 533956 - 532442 - | NADH dehydrogenase I chain N TERM 492 532524 - 532504 - G 78 -4.1 -5.42198 | CTCCAAAAAATAAAA TAATAATAG CAA CAATTATTA CCATAAATCCTTCTG TERM 493 532783 - 532795 + g 71 -7.7 -3.48276 | opp_overlap 532783 CAATTACAAATATTA CCGAT AAC ATCGG TTCTCTCCAAAACAA nuoM 535561 - 534032 - | NADH dehydrogenase I chain M nuoL 537483 - 535606 - | NADH dehydrogenase I chain L TERM 494 535828 - 535796 - G 81 -7.4 -4.55295 | gap 1, opp_overlap 535797 535801, overlap 535798 TTTGCCACAAATAAA TATGGTTTTATAAAA ATAA TTTTATAAAACCA-A TCTAATCCCCATCCG TERM 495 535797 - 535828 + g 71 -9 -2.79183 | opp_overlap 535796 535798, overlap 535801 TTGCCACAAATAAAT ATGGTTTTATAAAA ATAA TTTTATAAAACCAA TCTAATCCCCATCCG TERM 496 535827 - 535798 - G 100 -12.5 -3.88703 | opp_overlap 535797 535801, overlap 535796 TGCCACAAATAAATA TGGTTTTATAAAA ATAA TTTTATAAAACCA ATCTAATCCCCATCC nuoK 537782 - 537480 - | NADH dehydrogenase I chain k nuoJ 538333 - 537782 - | NADH dehydrogenase I chain J TERM 497 538033 - 538009 - G 71 -6.7 -3.98944 | TAGAAAACAATACAA TTATTAATAAA GCA CTTATTAATAA TGAAGCTCCAACACA nuoI 538908 - 538363 - | NADH dehydrogenase subunit I nuoH 539903 - 538935 - | NADH dehydrogenase subunit H nuoG 542725 - 539900 - | NADH dehydrogenase subunit G TERM 498 539966 - 539951 - G 78 -3.2 -5.626 | opp_overlap 539963, overlap 539953 539962 CATTCCAGAAAAAAA TACAGG AATA CCTGGA AACCCCATGGGTAAT TERM 499 539964 - 539953 - G 71 -5.8 -4.45201 | opp_overlap 539963, overlap 539951 539962 TTCCAGAAAAAAATA CAGG AATA CCTG GAAACCCCATGGGTA nuoF 544175 - 542838 - | NADH dehydrogenase I chain F TERM 500 544090 - 544108 + g 78 -10.4 -2.87881 | TTAGATTGATACTCA GAAAACCA CAC TGGTTTTC TATCTGCACGAATTC nuoE 544642 - 544178 - | NADH dehydrogenase subunit E nuoCD 546523 - 544733 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D nuoB 547324 - 546653 - | NADH dehydrogenase subunit B nuoA 547761 - 547330 - | NADH dehydrogenase I chain A folC 549446 - 548199 - | folylpolyglutamate synthase accD 550403 - 549540 - | acetyl-CoA carboxylase beta subunit TERM 501 549853 - 549842 - G 73 -5.8 -4.57755 | ATCGATCATATAAAA CAGC TAAA GCTG CACTAGTTTTTGCCA TERM 502 550325 - 550348 + g 85 -2.4 -6.02345 | overlap 550327 AACCACTACACTTCG TCCATATTCC TTCT GGAACATGCA TTTTTTTTGTAGTTA TERM 503 550541 - 550551 + r 72 -5.4 -4.88918 | opp_overlap 550541 550538 TTTTGAAATAAATAA TACC TTG GGTA TTTTATTTCAACTAA truA 551280 - 550522 - | tRNA pseudouridine synthase A pdxB 552555 - 551437 - | erythronate-4-phosphate dehydrogenase fabB 554051 - 552834 - | 3-oxoacyl-[acyl-carrier-protein] synthase I TERM 504 555193 - 555169 - g 100 -12.3 -4.28548 | opp_overlap 555168 ATTCATGCATTAAAA GTAGCTGAACA CAA TATTCAGCTAC ATAATTTAGCACATC yfcB 554680 - 555591 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase aroC 555595 - 556668 + | chorismate synthase mntH 558390 - 557152 - | manganese transport protein MntH TERM 505 559632 - 559612 - g 70 -5.5 -4.26327 | CAGTTAGCAAAATAA TGGCAACTA AAC TAATTACCA ACGAATTTGTTGCTA nupC 558663 - 559877 + | nucleoside permease NupC gltX 561718 - 560267 - | glutamyl-tRNA synthetase lig 563944 - 562160 - | DNA ligase TERM 506 562291 - 562281 - G 72 -4 -5.09426 | TTTAACTGTAAAAAA GATT GCA AATC AGCATTCATTAAATT TERM 507 563136 - 563122 - G 70 -5.7 -4.20712 | overlap 563132 TATAATATTCTAAAA CTGGA TCAAT TCCAG AAACAATCTGAATAT TERM 508 564931 - 564918 - g 70 -5.3 -4.53303 | CAGCCCCACATAAAA TCCAA GGAA TTGGA GCAGGATTCATCCCC cysK 564242 - 565186 + | cysteine synthase A ptsH 565535 - 565807 + | phosphocarrier protein HPr TERM 509 566041 - 566031 - g 89 -4 -5.9003 | overlap 566036 AAAGTAAGAAAAAAA TTAG ATT CTAA ACAAGAAAGTATTTT ptsI 565839 - 567563 + | phosphoenolpyruvate-protein phosphotransferase cysA 568739 - 567687 - | sulfate/thiosulfate transporter subunit cysW 569626 - 568769 - | sulphate transport system permease protein CysW cysU 570464 - 569628 - | sulfate/thiosulfate transporter subunit cysP 571503 - 570469 - | thiosulphate-binding protein precursor talA 572171 - 573142 + | transaldolase B TERM 510 573318 - 573308 - g 72 -5.4 -4.6902 | TCATAACCCCAAAAA TCCA AAC TGGA TAAACCGAGATAGAT TERM 511 574502 - 574487 - g 90 -7.6 -5.1101 | opp_overlap 574486 TGACTATTCAAAAAA TGCCAT TCGT ATGGCA GCTTTAATGAATAAT tktA 573156 - 575150 + | transketolase TERM 512 575158 - 575131 - f 72 -6.6 -4.32579 | opp_overlap 575135, overlap 575139 ATATTTTACAAGAAA TCAATATATTAT TACA ATAATATATTAA TGCAATAATCAATAT dapE 575233 - 576387 + | succinyl-diaminopimelate desuccinylase dapA 577859 - 576981 - | dihydrodipicolinate synthase bcp 578340 - 578819 + | thioredoxin-dependent thiol peroxidase upp 579510 - 578884 - | uracil phosphoribosyltransferase ureG 580938 - 580309 - | putative urease accessory protein G TERM 513 580825 - 580835 + g 70 -5.4 -4.60746 | AGTAACTACTGCCAA CTGA TAA TCAG TTTTCATCTTTTTAC ureF 581714 - 581031 - | putative urease accessory protein F ureC 583716 - 582013 - | urease subunit alpha ureB 584030 - 583719 - | urease subunit beta ureA 584368 - 584066 - | urease subunit gamma TERM 514 584420 - 584399 - R 80 -8.7 -4.08887 | opp_overlap 584404 584419, overlap 584402 ATTATGTAAACCAAA CACGAGGCA TTAC TGCCTCTTG CCCTATAATAATAGG TERM 515 584417 - 584402 - R 74 -9 -2.77332 | opp_overlap 584404, overlap 584399 ATGTAAACCAAACAC GAGGCA TTAC TGCCTC TTGCCCTATAATAAT ureD 585245 - 584385 - | putative urease accessory protein D guaA 586991 - 585411 - | bifunctional GMP synthase/glutamine amidotransferase protein guaB 588525 - 587056 - | inosine-5'-monophosphate dehydrogenase TERM 516 589482 - 589472 - g 76 -5.4 -5.03201 | opp_overlap 589472 AATAATAATCAAAAA GTAG CTG CTAC TTATATGCCAATGGG TERM 517 589684 - 589656 - g 91 -4.7 -5.84432 | opp_overlap 589659, overlap 589659 TACAACACAAAAAAA CAATACATACATA TAC TAAGTATGTATTT ATAGGAGCAGGAGGA TERM 518 589681 - 589659 - g 80 -6.4 -4.94703 | opp_overlap 589659, overlap 589656 AACACAAAAAAACAA TACATACATA TAC TAAGTATGTA TTTATAGGAGCAGGA TERM 519 589891 - 589909 + G 72 -7.6 -3.59627 | opp_overlap 589891 589894, overlap 589894 TACTCGTATCTTAAA TAACAAAA AAG TTTTGTTA TTTGGACCATTTGCT TERM 520 589909 - 589891 - g 72 -7.6 -3.60296 | opp_overlap 589891 589894, overlap 589894 TACTCGTATCTTAAA TAACAAAA AAG TTTTGTTA TTTGGACCATTTGCT mqo 588920 - 590494 + | malate:quinone oxidoreductase engA 592011 - 590554 - | GTP-binding protein EngA TERM 521 591759 - 591806 + g 81 -10.5 -3.10796 | opp_overlap 591761 591777, overlap 591762 591777 ATTCCTGAATTGCAA TATTTGTCTGAT-CATTAATACA ATCC TGTATTAATGTATCAGA-AAATA TATTAAATCCTCCAG TERM 522 591804 - 591761 - G 73 -8.7 -3.09492 | opp_overlap 591759 591762 591777, overlap 591777 TCCTGAATTGCAATA TTTGTCTGAT-CATTAATACA ATCC TGTATTAATGTATCAGA-AAA TATATTAAATCCTCC TERM 523 591762 - 591804 + g 81 -10.3 -3.11316 | gap 1, opp_overlap 591761 591777, overlap 591759 591777 CCTGAATTGCAATAT TTGTCTGAT-CATTAATACA ATCC TGTATTAATGTATCAGAAAA TATATTAAATCCTCC hisS 593408 - 592107 - | histidyl-tRNA synthetase TERM 524 592903 - 592889 - G 71 -7.2 -3.73387 | opp_overlap 592886 ATGATAATAAACCAA TGGAAT TTA ATTCCA GAGTTAAGTAATTAC TERM 525 593147 - 593131 - G 85 -10.9 -3.17075 | CCCGCTCTAACGCAA CCAGAAG TAC CTTCTGG CCTTAACGTTAAATC TERM 526 594051 - 594070 + r 72 -5.2 -4.85599 | opp_overlap 594045, overlap 594045 AATGTAACATTTACT TTAAATTT ACTA AAATTTAA TTTTTCTAAAATAGA TERM 527 594500 - 594474 - R 89 -11.1 -3.00923 | opp_overlap 594480, overlap 594480 CTTCAATATCACACA GTACAATGTAT TAACT ATACATTGTAC TAAAAAATCAGACCC ndk 596452 - 596042 - | nucleoside diphosphate kinase nifS 597951 - 596764 - | putative L-cysteine desulfurase suhB 598453 - 599277 + | putative myo-inositol-1(or 4)-monophosphatase glyA 600630 - 599386 - | serine hydroxymethyltransferase yfhC 601183 - 600704 - | putative cytosine/adenosine deaminase acpS 601704 - 601327 - | holo-[acyl-carrier protein] synthase pdxJ 602444 - 601701 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 528 602494 - 602543 + r 70 -8.3 -3.24924 | opp_overlap 602493 602497 602498, overlap 602494 602497 602497 CAACTTTATAATAAC TAATTCATTTGTATTCTAATATT ATAT AATATTAGAATACAAATAACATA TATTATCAATAAAAC TERM 529 602540 - 602497 - R 95 -12.2 -3.58208 | opp_overlap 602494 602494 602497 602497, overlap 602493 602498 CTTTATAATAACTAA TTCATTTGTATTCTAATATT ATAT AATATTAGAATACAAATAAC ATATATTATCAATAA TERM 530 602497 - 602540 + r 77 -10 -2.51045 | opp_overlap 602497 602493 602498, overlap 602494 602494 602497 CTTTATAATAACTAA TTCATTTGTATTCTAATATT ATAT AATATTAGAATACAAATAAC ATATATTATCAATAA TERM 531 602497 - 602541 + r 73 -8.4 -3.18945 | gap 1, opp_overlap 602497 602493 602498, overlap 602497 602494 602494 CTTTATAATAACTAA T-TCATTTGTATTCTAATATT ATAT AATATTAGAATACAAATAACA TATATTATCAATAAA TERM 532 602539 - 602498 - R 100 -15.7 -2.74443 | opp_overlap 602497 602497 602494 602494, overlap 602497 602493 TTTATAATAACTAAT TCATTTGTATTCTAATATT ATAT AATATTAGAATACAAATAA CATATATTATCAATA rnc 603368 - 602670 - | ribonuclease III lepB 604501 - 603503 - | signal peptidase I TERM 533 604376 - 604398 + g 75 -9.4 -3.03338 | opp_overlap 604374 604371 ACTCTTATAATACTC TTGTATTTTT TTC AAAAATACAA TATTACCGCGATTAT lepA 606344 - 604545 - | GTP-binding protein LepA TERM 534 604636 - 604646 + g 81 -2.6 -5.73978 | TTTCCTATTTTCTGG TTAT GCA ATAA TTTTTTCTTTCTAGT TERM 535 604994 - 604978 - G 85 -4.5 -5.56568 | ATACGATCAAAAAAA TCTAAAA TTA TTTCAGA CATAGGTAACTCATA TERM 536 605592 - 605606 + g 72 -8.6 -3.02639 | overlap 605589 605587 TACCTCTCCGCAATT CAACGA CAT TCGTTG TACTTGTTTCGGAGT ung 606597 - 607262 + | uracil-DNA glycosylase TERM 537 607461 - 607424 - T 100 -10.1 -5.32599 | opp_overlap 607424 TACAAAATACAAAAA TACGTTACATGATTTAT ATTA ATATGTCATGTAACGTA TTTTTGTATAATTTT TERM 538 607424 - 607461 + T 100 -12.3 -5.07941 | opp_overlap 607424 TACAAAATACAAAAA TACGTTACATGATTTAT ATTA ATATGTCATGTAACGTA TTTTTGTATAATTTT grpE 608081 - 607494 - | heat shock protein GrpE yfjB 608206 - 609087 + | inorganic polyphosphate/ATP-NAD kinase TERM 539 609403 - 609385 - g 79 -5.4 -5.21709 | opp_overlap 609385, overlap 609387 609400 609402 TCCTACATTAAAAAA TATATTTG GAT CAAATACA TGGTATTACGTATAC TERM 540 609401 - 609387 - g 70 -5.8 -4.23988 | opp_overlap 609385, overlap 609385 609400 CTACATTAAAAAATA TATTTG GAT CAAATA CATGGTATTACGTAT smpA 609173 - 609520 + | small membrane protein A yfjG 610048 - 609605 - | hypothetical protein TERM 541 610326 - 610308 - g 70 -5.4 -4.61231 | opp_overlap 610308 TTAGATCTCGAAAAA TAACCATT GAA AATAGTTA TGTATCCTTACGCGA smpB 610196 - 610642 + | SsrA-binding protein emrE 611253 - 611582 + | emrE protein (methyl viologen resistance protein C) (ethidium resistance protein) TERM 542 612325 - 612311 - g 71 -2.2 -5.34555 | overlap 612313 TTAGATTATAAAAAA TCTTTT CTC AAAAAA AACAACAAAAATAAT TERM 543 613084 - 613031 - g 100 -25.3 -4.44392 | opp_overlap 613031 613048 ATAAGAAAAATTAAA TTTGATAAATTAATAAACCAACTCC TATA AGAGTTGGTTTATTAATTTATCAAA TTTAATTTTTCTACT TERM 544 613031 - 613084 + G 100 -24.6 -4.3902 | opp_overlap 613031, overlap 613048 ATAAGAAAAATTAAA TTTGATAAATTAATAAACCAACTC CTATAA GAGTTGGTTTATTAATTTATCAAA TTTAATTTTTCTACT pssA 611675 - 613060 + | phosphatidylserine synthase TERM 545 613048 - 613067 + F 80 -7.9 -4.42976 | opp_overlap 613031, overlap 613031 TGATAAATTAATAAA CCAACTC CTATAA GAGTTGG TTTATTAATTTATCA TERM 546 614755 - 614771 + F 77 -8 -4.10934 | TTAGTTTTTCGGCGA GCAGGT TTTTC ACCTGC TTTATCGTTACTTAT TERM 547 616346 - 616360 + F 79 -10 -3.02511 | overlap 616339 CCTACATGTCCCCTA GGGGTT TCG AACCCC TGTTGCCGCCGTGAA TERM 548 616560 - 616543 - f 75 -9.1 -3.07291 | opp_overlap 616543 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 549 618603 - 618580 - g 83 -10.4 -3.41234 | opp_overlap 618582 TATCAACTGAAGGAA CAGCGTTAAT ATTA ACTAACGCTG GATTAACAGTAAACA TERM 550 618924 - 618890 - g 100 -14.6 -5.05301 | opp_overlap 618889 618887 618892, overlap 618892 618893 AAAGAATTACAAAAA CACCGTAATCATTGTT GAT AACAATGATTACGATA ATATTTTAAACGAAA TERM 551 618922 - 618892 - g 100 -15 -4.12226 | opp_overlap 618889 618887 618892, overlap 618890 618893 AGAATTACAAAAACA CCGTAATCATTGTT GAT AACAATGATTACGA TAATATTTTAAACGA TERM 552 618892 - 618922 + G 100 -12.8 -2.93623 | opp_overlap 618892 618890 618893, overlap 618889 618887 AGAATTACAAAAACA CCGTAATCATTGTT GAT AACAATGATTACGA TAATATTTTAAACGA TERM 553 618921 - 618893 - g 100 -16.3 -3.05709 | opp_overlap 618892 618889 618887, overlap 618892 618890 GAATTACAAAAACAC CGTAATCATTGTT GAT AACAATGATTACG ATAATATTTTAAACG TERM 554 619990 - 619980 - g 70 -5.4 -4.53163 | CCAGATAGCATAAAA GAAG CTG CTTC CATGGGTATTAGTTG purH 618462 - 620111 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase rpoC 624491 - 620229 - | DNA-directed RNA polymerase subunit beta' TERM 555 620996 - 621010 + g 70 -8.6 -2.60075 | overlap 620995 TAACTCCACTAATTT CTGCTA AAA TAGCAG CTTCCTTCGGACGAC TERM 556 622773 - 622754 - G 100 -10.8 -5.12617 | opp_overlap 622754 CAATCATCCAAAAAA TAGCACGA CCTA TCGTGCTA TTTACAAAATTTATT TERM 557 622754 - 622773 + g 90 -10.8 -3.60475 | opp_overlap 622754 CAATCATCCAAAAAA TAGCACGA CCTA TCGTGCTA TTTACAAAATTTATT TERM 558 623122 - 623108 - G 73 -8.6 -3.18738 | overlap 623107 GATCACCATCAAAAT CAGCAT TAT ATGCTG CACACACCAACGGAT rpoB 628634 - 624606 - | DNA-directed RNA polymerase subunit beta TERM 559 625390 - 625412 + g 77 -7.8 -4.1822 | GGCATATCTTCCACT GGATTGATTT TTG AAATCACTCC TTTATTACCATGACG rplL 629221 - 628841 - | 50S ribosomal protein L7/L12 rplJ 629813 - 629316 - | 50S ribosomal protein L10 rplA 630838 - 630131 - | 50S ribosomal protein L1 TERM 560 630460 - 630432 - G 80 -8.9 -3.76224 | opp_overlap 630435 GGGTTAGGCATTAAA CCTTTAGGACCTA AAA TAGGTCCTAATTG GCTAACTATATTCAT TERM 561 630435 - 630457 + g 100 -13.6 -3.09759 | opp_overlap 630432 TTAGGCATTAAACCT TTAGGACCTA AAA TAGGTCCTAA TTGGCTAACTATATT TERM 562 630775 - 630810 + g 100 -3.4 -6.34616 | opp_overlap 630768 630777 TCAAACCATCTGCAA TATTATACTGCACAGA CTTA TCTATACAGTTTAATA TTTTTTTTCTTTTAC rplK 631275 - 630835 - | 50S ribosomal subunit protein L11 nusG 631928 - 631383 - | transcription antitermination protein NusG secE 632304 - 631930 - | preprotein translocase subunit SecE tuf 633643 - 632459 - | elongation factor Tu fusA 635872 - 633743 - | elongation factor G rpsG 636453 - 635980 - | 30S ribosomal protein S7 rpsL 636975 - 636601 - | 30S ribosomal protein S12 pabA 638311 - 637730 - | para-aminobenzoate synthase, glutamine amidotransferase component II trpS 639475 - 638471 - | tryptophanyl-tRNA synthetase rpe 640399 - 639719 - | ribulose-phosphate 3-epimerase TERM 563 640097 - 640083 - G 76 -5 -5.10029 | opp_overlap 640083 640083 640086, overlap 640084 640086 ATTAATTGTAAAAAA CGATCA ACA TGATCA GTTGATTCTGGATGA TERM 564 640313 - 640292 - G 73 -8.1 -3.41195 | AACATCAAAATGTAA TACATCTGC TCCA GCAGATATA ACATTAGATACATCT aroB 641790 - 640696 - | 3-dehydroquinate synthase TERM 565 641351 - 641321 - G 70 -5.6 -4.25256 | opp_overlap 641325, overlap 641318 641325 GGCTGATGAAAAGAA CCAATCATGTTCTT TCC AAAAACATGATTTA CACCGGTTTTACCTC TERM 566 641347 - 641325 - G 77 -8.6 -3.70405 | opp_overlap 641325, overlap 641321 641318 GATGAAAAGAACCAA TCATGTTCTT TCC AAAAACATGA TTTACACCGGTTTTA TERM 567 641751 - 641732 - G 75 -9.4 -2.95081 | opp_overlap 641731 641730 641734, overlap 641727 641734 TTATTTAAAAGACCA TACCCTAT AATA ATAGGGTA ACTTCCTGTTTTCAC aroK 642392 - 641835 - | shikimate kinase I yhgI 643461 - 644078 + | hypothetical protein asd 645359 - 644244 - | aspartate-semialdehyde dehydrogenase TERM 568 644473 - 644493 + g 88 -3.3 -6.15259 | GATTGTATTAAATTT TCTATCTCT ATT AAAGGTAGA TTTTTTTTTAACTTA TERM 569 645804 - 645784 - g 71 -6.9 -3.97368 | TTCTTAATTTACAAA CAGAAACAG TAT CTATCTCTG GGGGCATTGTCTTAT yhgN 645579 - 646172 + | dITP- and XTP- hydrolyzing protein yigL 647322 - 646522 - | putative sugar phosphatase corA 648511 - 647567 - | magnesium and cobalt transport protein TERM 570 648873 - 648895 + r 78 -9.4 -3.4759 | opp_overlap 648871 648873 ATTATATTCATAATA GTTATTAAAT AAA ATTTAATAAC TTAATTATAGTAAAT TERM 571 648895 - 648873 - R 76 -9.4 -3.2699 | opp_overlap 648873, overlap 648871 ATTATATTCATAATA GTTATTAAAT AAA ATTTAATAAC TTAATTATAGTAAAT yigB 649628 - 648900 - | HAD family hydrolase dapF 650481 - 649651 - | diaminopimelate epimerase hemC 650907 - 651842 + | porphobilinogen deaminase TERM 572 652401 - 652378 - g 79 -7.6 -4.27465 | TATAATGGAAAAGAA CAATATAATC GTAT GATTACATTG GATATAGAAATTATA hemD 651868 - 652611 + | uroporphyrinogen-III synthase rho 654689 - 653430 - | transcription termination factor Rho trxA 655399 - 655058 - | thioredoxin 1, redox factor ilvC 657021 - 655543 - | ketol-acid reductoisomerase ilvA 658643 - 657099 - | threonine dehydratase TERM 573 657343 - 657332 - G 72 -4.4 -5.10154 | ACTCAAAACTAAAAA TTCG CTCA CGAA AAGACTGTAAAGAAC ilvD 660538 - 658682 - | dihydroxy-acid dehydratase ilvE 661540 - 660617 - | branched-chain amino acid aminotransferase ilvM 661847 - 661611 - | acetolactate synthase 2 regulatory subunit ilvG 663556 - 661892 - | acetolactate synthase 2 catalytic subunit metF 666003 - 665107 - | 5,10-methylenetetrahydrofolate reductase TERM 574 665153 - 665135 - G 72 -9 -2.91695 | TTCACTCCTAAAGCA TGACATAT CGT ATATGTCA AATCTGATCGATTAA metB 667310 - 666153 - | cystathionine gamma-synthase TERM 575 667477 - 667512 + r 100 -20.8 -5.51353 | opp_overlap 667477 ATAAAATAACAAAAA CCCTTTCATCTGATTT CATT AAATCAGATGAAAGGG TTTTTGTTATTTTTA TERM 576 667512 - 667477 - R 100 -20.8 -5.47964 | opp_overlap 667477 ATAAAATAACAAAAA CCCTTTCATCTGATTT CATT AAATCAGATGAAAGGG TTTTTGTTATTTTTA rpmE 667721 - 667500 - | 50S ribosomal protein L31 fpr 668321 - 669070 + | ferredoxin--NADP reductase TERM 577 669714 - 669692 - g 71 -7.9 -3.48276 | opp_overlap 669692 669696, overlap 669696 TCCGGGTCTACACAA TCAATTTGT ATACA ACAAATTGA TTCAATTATCAAATT tpiA 669260 - 670048 + | triosephosphate isomerase pfkA 671076 - 670114 - | 6-phosphofructokinase TERM 578 670410 - 670431 + g 83 -3.1 -5.72207 | gap 1, overlap 670412 CATTACAAATACGCT CA-GTTATAG CAA CTATAGCATG TTTTTTTCCTTTAGA cysE 672145 - 671411 - | serine acetyltransferase gpsA 673232 - 672231 - | glycerol-3-phosphate dehydrogenase grxC 673941 - 673675 - | glutaredoxin 3 yibN 674412 - 673969 - | putative rhodanese-related sulfurtransferase TERM 579 674551 - 674526 - H 77 -7.9 -4.08651 | opp_overlap 674526 674529, overlap 674529 ATTTTAACTAAACAA TAATTTTATTT TAAC AAATAAAATTA TAATATACTTACATA TERM 580 674788 - 674749 - H 100 -26.8 -3.66844 | opp_overlap 674749, overlap 674726 TTTATAGTGTAACAA TACTCAACACCCGTGACT CCTT AGTCACGGGTGTTGAGTA TTGTTACACTATAAA TERM 581 674749 - 674788 + H 100 -26.8 -3.66844 | opp_overlap 674726 674749 TTTATAGTGTAACAA TACTCAACACCCGTGACT CCTT AGTCACGGGTGTTGAGTA TTGTTACACTATAAA TERM 582 675696 - 675677 - g 74 -6.6 -4.27483 | ATTTACAAAAGCAAA TATTTCTT ATTT AAGAAATA TAGGATATGATTTTT rfaD 674838 - 675773 + | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 583 675934 - 675917 - g 77 -7.1 -4.28432 | AATCTCAAGTTAAAA TAGATGT TATC ACATCTA TACGATGTGAACCTA TERM 584 676008 - 675980 - g 75 -4 -5.18866 | opp_overlap 675980, overlap 675983 TTGAAATAAACAAAA TATTCTATGTTC CATAT AAACATAGAGTA TTAAATTTAACTCAA TERM 585 676684 - 676698 + G 74 -8.6 -3.27653 | overlap 676681 GTGGTAGGTTTATAT GGAATC ACA GATTCC TGTTGTACTCCCCCT rfaF 675817 - 676872 + | ADP-heptose; lipopolysaccharide heptosyltransferase II TERM 586 677598 - 677579 - g 83 -6.6 -5.03314 | GCTATTTGTAAAAAA GATTAAAA AACA TTTTAATC AAGTAATAATATTAT rfaC 676893 - 677873 + | lipopolysaccharide heptosyltransferase I TERM 587 678199 - 678223 + G 70 -8.1 -3.05521 | overlap 678187 TTATATTATATATGT TTGTATATAAT ATT ATTATATACAG TATTCAACCTATCAT kdtA 678180 - 679472 + | 3-deoxy-D-manno-octulosonic-acid transferase TERM 588 679466 - 679522 + T 100 -28.9 -5.62552 | opp_overlap 679466 CTATTTGGTAAAAAA TTCTTGAATATTATTTCATTGATTTAA TTT TTAAATCAATGAAATAATATTCAAGAA TTTTTTACTTTTTTT TERM 589 679522 - 679466 - T 100 -28.9 -5.02074 | opp_overlap 679466 CTATTTGGTAAAAAA TTCTTGAATATTATTTCATTGATTTAA TTT TTAAATCAATGAAATAATATTCAAGAA TTTTTTACTTTTTTT rpmG 679688 - 679527 - | 50S ribosomal subunit protein L33 TERM 590 679691 - 679703 + r 85 -3.5 -6.4275 | TTTCTTTAGCCATGA TTATT CCT AATAA TTTTTTTTATTTTTG rpmB 679936 - 679697 - | 50S ribosomal protein L28 TERM 591 680238 - 680222 - H 74 -5.3 -4.95484 | overlap 680217 680226 TAGTATTAAATAAAA TAATTTT TAA AAAATTA AAATAATAATATTAA dut 680447 - 680902 + | deoxyuridine 5'-triphosphate nucleotidohydrolase yicC 681103 - 681975 + | hypothetical protein TERM 592 682107 - 682050 - f 100 -22.3 -2.87501 | opp_overlap 682040 682059, overlap 682059 TTTTATTAAAGATTA TTTTTAAAATTTATTTATATTTATTTT TATA AAAATAAATATAAATAAATTTTAAAAA TATAACAAAAATAAG TERM 593 682098 - 682059 - f 100 -14.2 -4.12456 | opp_overlap 682059, overlap 682050 AGATTATTTTTAAAA TTTATTTATATTTATTTT TATA AAAATAAATATAAATAAA TTTTAAAAATATAAC TERM 594 682059 - 682098 + F 100 -14.2 -4.13014 | opp_overlap 682059 682050 AGATTATTTTTAAAA TTTATTTATATTTATTTT TATA AAAATAAATATAAATAAA TTTTAAAAATATAAC TERM 595 682155 - 682108 - f 100 -16.2 -4.7339 | opp_overlap 682119 682143, overlap 682119 682145 AATAAATTTTAAAAA TATAACAAAAATAAGTTTTTTT GTAT AAAAAAACTTATTTTTGTTATT TTTTACTAAAAATAA TERM 596 682144 - 682119 - f 100 -9.3 -5.35365 | opp_overlap 682119 682143, overlap 682108 AAAATATAACAAAAA TAAGTTTTTTT GTAT AAAAAAACTTA TTTTTGTTATTTTTT TERM 597 682119 - 682144 + F 100 -9.3 -5.54403 | opp_overlap 682119 682108, overlap 682143 AAAATATAACAAAAA TAAGTTTTTTT GTAT AAAAAAACTTA TTTTTGTTATTTTTT TERM 598 682709 - 682734 + G 73 -9.1 -2.52464 | opp_overlap 682713 682716, overlap 682713 682716 TATATGGGATTTTCA TCAAGGACAGT AGTT ACTGTACTTGA TGCGTTGGAAAAAGA unknown 682523 - 682957 + | putative transcription regulator protein TERM 599 683121 - 683078 - f 100 -24.4 -3.82031 | opp_overlap 683078 683084, overlap 683084 GTAAGTACTATTAAA TACAAACTACTAACTATCCA TATA TGGATAGTTAGTAGTTTGTA TTTACGTAATATGTA TERM 600 683078 - 683121 + F 100 -24.4 -3.70863 | opp_overlap 683078 683084, overlap 683084 GTAAGTACTATTAAA TACAAACTACTAACTATCCA TATA TGGATAGTTAGTAGTTTGTA TTTACGTAATATGTA TERM 601 683084 - 683115 + F 100 -17.6 -4.35044 | opp_overlap 683078 683084, overlap 683078 ACTATTAAATACAAA CTACTAACTATCCA TATA TGGATAGTTAGTAG TTTGTATTTACGTAA TERM 602 683115 - 683084 - f 100 -17.6 -4.37506 | opp_overlap 683084 683078, overlap 683078 ACTATTAAATACAAA CTACTAACTATCCA TATA TGGATAGTTAGTAG TTTGTATTTACGTAA TERM 603 683209 - 683192 - g 85 -11.3 -2.55216 | overlap 683191 683189 TATTAGGTATAATAT CTGCTCC TAGT GGAGCAG GGAAGTCTACTTTAA gmk 683158 - 683790 + | guanylate kinase rpoZ 683827 - 684009 + | DNA-directed RNA polymerase omega chain glnA 684080 - 685501 + | glutamine synthetase polA 688468 - 685637 - | DNA polymerase I TERM 604 686565 - 686575 + g 76 -2.6 -5.58074 | TTTGGTATAGGATAT TTAT GAG ATAA TTTTTTTAATACTTC TERM 605 686837 - 686850 + g 85 -2.5 -5.87688 | opp_overlap 686818, overlap 686818 AATTAATGGTATTTC TATTT CTTG AAATA TTTTTTTTAACTTAT TERM 606 689172 - 689121 - R 100 -25.2 -3.06492 | opp_overlap 689133, overlap 689123 GGATTGAGGTTAATA TATTGATTTTTCTATGATTCATAT ACTT ATATGAATCATAGAAAAATCAATA AGATAGATGTGTATA TERM 607 689170 - 689123 - R 100 -23.4 -3.08992 | opp_overlap 689133, overlap 689121 ATTGAGGTTAATATA TTGATTTTTCTATGATTCATAT ACTT ATATGAATCATAGAAAAATCAA TAAGATAGATGTGTA yigC 690798 - 689299 - | putative oxidoreductase aarF 692543 - 690906 - | ubiquinone biosynthesis protein TERM 608 691574 - 691586 + g 76 -2.7 -5.63517 | TAAAATTAGATGCTA GATAA TAT TTGTC TTTTTTATTTAAAGA ubiE 693869 - 693105 - | ubiquinone/menaquinone biosynthesis methyltransferase UbiE rumC 695451 - 693976 - | hypothetical protein TERM 609 694151 - 694177 + g 91 -11.2 -3.10056 | opp_overlap 694157, overlap 694157 ATGGTTTCAGTTTTA TGTAAATAAAAT CCA ATTTTATTTACA TCTTCCATAAATAAT TERM 610 695355 - 695399 + g 100 -12.8 -3.77832 | gap 1, overlap 695356 TTTTATATTTTTTAA T-GTTTTTTTGTATTTTTTTT GTAT AAAAAAAATACAAAAAAACTA TTATTAAATTTAAAC TERM 611 695356 - 695397 + g 100 -17.9 -3.46873 | overlap 695355 TTTATATTTTTTAAT GTTTTTTTGTATTTTTTTT GTAT AAAAAAAATACAAAAAAAC TATTATTAAATTTAA udp 696377 - 695562 - | uridine phosphorylase TERM 612 695904 - 695889 - G 74 -6.2 -4.46212 | opp_overlap 695889 TTGTCCAGGATAAAA TGTATC TGAG GATACA TTAATACCCCAGTAT metE 698735 - 696426 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase rpoH 699829 - 698978 - | RNA polymerase factor sigma-32 TERM 613 699388 - 699402 + g 86 -7.2 -5.13741 | opp_overlap 699388 699387, overlap 699384 CTTCGTTGAACCAAC CTAAAC GTT GTTTAG TTTTTCTTAAATTAA ftsY 701089 - 700163 - | cell division protein FtsY yhhF 701183 - 701773 + | putative methyltransferase pgi 703581 - 701905 - | glucose-6-phosphate isomerase TERM 614 702513 - 702537 + g 78 -10.1 -3.21099 | opp_overlap 702517 TATTACTTTGTTGTA TATATGCAGCG AAA CGATGCATATA TTGATCATAAGGAAA TERM 615 703279 - 703303 + g 84 -8.7 -4.35874 | opp_overlap 703283, overlap 703283 GTTTTTTCTGTTTCT TAAAGCTGTAT GTA ATACAGCTCTA TTTTCGCTTCTATTA TERM 616 703299 - 703283 - G 79 -9.5 -3.53012 | opp_overlap 703279 703283 TTTCTGTTTCTTAAA GCTGTAT GTA ATACAGC TCTATTTTCGCTTCT TERM 617 703283 - 703299 + g 79 -9.5 -3.45395 | opp_overlap 703283, overlap 703279 TTTCTGTTTCTTAAA GCTGTAT GTA ATACAGC TCTATTTTCGCTTCT metA 704748 - 703858 - | homoserine O-succinyltransferase