TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.677487 %AT, 591895 nt, 4030 terms. Intergenic: 0.784251 %AT, H2T: 118847 nt, 1586 terms; T2T: 31840 nt, 808 terms; H2H: 50261 nt, 1444 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|71891793|ref|NC_007292.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome (length 791654) gidA 1 - 1899 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 1 2260 - 2285 + F 73 -7.5 -3.91983 | overlap 2257 2262 CAAGATAAATTACTT GTCGACCGAAC TATA GTTCGGTCGTG TGTTTGTTTCTGTAA TERM 2 2262 - 2283 + F 100 -14.5 -3.53068 | overlap 2260 2257 AGATAAATTACTTGT CGACCGAAC TATA GTTCGGTCG TGTGTTTGTTTCTGT atpB 2617 - 3426 + | F0F1 ATP synthase subunit A atpE 3466 - 3705 + | F0F1 ATP synthase subunit C atpF 3765 - 4247 + | F0F1 ATP synthase subunit B TERM 3 4750 - 4761 + G 70 -4.4 -4.75174 | opp_overlap 4750 TGATTGATGGAAGTA TACG TGGA CGTA TTTTTCGCTTAAATC atpH 4248 - 4793 + | ATP synthase, F1 sector, delta-subunit TERM 4 5667 - 5696 + G 80 -9.3 -3.61331 | gap 1, opp_overlap 5686, overlap 5665 5669 TTTATTACTACGACG TCCTCCTGGGCGTG AAG CATACCCAGG-GGA TATATTTTATTTACA TERM 5 5669 - 5695 + G 82 -10.8 -2.75714 | opp_overlap 5686, overlap 5667 5665 TATTACTACGACGTC CTCCTGGGCGTG AAG CATACCCAGGGG ATATATTTTATTTAC atpA 4831 - 6372 + | F0F1 ATP synthase subunit alpha atpG 6405 - 7271 + | F0F1 ATP synthase subunit gamma atpD 7302 - 8690 + | F0F1 ATP synthase subunit beta atpC 8728 - 9162 + | ATP synthase, F1 sector, epsilon-subunit glmU 9294 - 10682 + | N-acetyl glucosamine-1-phosphate uridyltransferase TERM 6 10694 - 10673 - T 90 -7.5 -5.18357 | opp_overlap 10673 GAAGCGATTAAAAAA CAAAAAATA AAAT TATTTTTTG TTTAAGAATTATTCG TERM 7 10673 - 10694 + T 72 -7.5 -3.64049 | opp_overlap 10673 GAAGCGATTAAAAAA CAAAAAATA AAAT TATTTTTTG TTTAAGAATTATTCG trmE 12325 - 10913 - | tRNA modification GTPase TrmE TERM 8 11138 - 11169 + g 87 -8.8 -4.21098 | opp_overlap 11146, overlap 11140 GAAATTTCCTTGATT TTCAGAAAGATTGC TTTT GCAATCTTGCTGTA TTTTAGACTTGATAT TERM 9 11140 - 11167 + g 93 -11.4 -3.70019 | opp_overlap 11146, overlap 11138 AATTTCCTTGATTTT CAGAAAGATTGC TTTT GCAATCTTGCTG TATTTTAGACTTGAT TERM 10 11161 - 11146 - G 74 -7.6 -3.87815 | opp_overlap 11140 11138 CTTGATTTTCAGAAA GATTGC TTTT GCAATC TTGCTGTATTTTAGA TERM 11 11520 - 11534 + g 72 -7.2 -3.94746 | opp_overlap 11520 11518, overlap 11531 GCAGTGTCAGTAATA TGGAAT GCT ATTCCA TTTAATTGGATATAC TERM 12 11673 - 11700 + g 80 -9.2 -3.63662 | gap 1, overlap 11668 11676 ATTACTATTTTTATC CCT-TCACGGAGT AAA ACACCGTGATAGG TTGATTTATACATTT TERM 13 11676 - 11696 + g 74 -9.7 -2.64878 | overlap 11673 11668 ACTATTTTTATCCCT TCACGGAGT AAA ACACCGTGA TAGGTTGATTTATAC TERM 14 12286 - 12270 - G 70 -8 -3.11291 | overlap 12262 CGTATAATTCCAATA CCTCCA CGGCC TGGAGG TGTGGAAATAGCAAC yidCD 14316 - 12400 - | hypothetical protein TERM 15 12546 - 12557 + g 81 -3 -5.76633 | opp_overlap 12546 TAAAAATGATTAACA TGAT AGTC ATCA TTTTTTTCTGTATCG TERM 16 13252 - 13274 + g 82 -10 -3.26319 | AAGGGGAATCCAAGC TGTCGCAAAA TAT TTTTGTGACA TTGCTATCCAACCTT rnpA 14642 - 14295 - | RNase P, protein component rmpH 14818 - 14666 - | 50S ribosomal subunit protein L34 TERM 17 15213 - 15245 + G 72 -8.6 -3.12036 | gap 2, opp_overlap 15212 15210 15213, overlap 15210 CTTTGCAAAAAGTAG TGGGCATTCTTAGCGG ACG CC-C-GAGAATGCCCA TATTAACTCATGTGT dnaN 15161 - 16264 + | DNA polymerase III, beta-subunit gyrB 16575 - 18989 + | DNA gyrase, subunit B ibpA 19201 - 19611 + | heat shock protein A TERM 18 19658 - 19692 + T 78 -2.1 -6.17184 | overlap 19653 19650 TGCGCGATAGTCAAG CCGGGCTTTATTAAT TGTAT ATATATGGAGCTCGG TTTTTTTTTGGTAAT BPEN_018 20772 - 19765 - | transmembrane protein TERM 19 20049 - 20033 - G 73 -8.1 -3.56347 | opp_overlap 20021 20018, overlap 20019 20031 20043 ATATTGGAAATAAGA TTACCAA TAA TTGGTAA CATACCAAAAATAAA TERM 20 20057 - 20043 - G 72 -7.2 -3.77553 | overlap 20033 20031 TAAGATTACCAATAA TTGGTA ACA TACCAA AAATAAAAGTAATGA TERM 21 20491 - 20472 - G 81 -4.4 -5.4588 | overlap 20481 TAAAATCAGAAAAAA TTCTATTA ATTT CAATAGAA ATAGTAATTTTATTA TERM 22 20998 - 20975 - H 70 -4 -5.252 | overlap 20978 TATGTTTAGAAAAAA TAATATCTAT TTTG ATAGATATAA AAATGTAAGTATTGG TERM 23 20995 - 20978 - H 71 -5.7 -4.72201 | overlap 20975 GTTTAGAAAAAATAA TATCTAT TTTG ATAGATA TAAAAATGTAAGTAT TERM 24 21609 - 21589 - g 80 -7.5 -4.16251 | opp_overlap 21588, overlap 21580 AGATAATTGGGAAAA CCCTACGCT TGG AGCATGGGG ATTAGGTTGGGAAAT glyQ 21218 - 22132 + | glycyl-tRNA synthetase subunit alpha TERM 25 23072 - 23086 + G 70 -7.2 -3.61654 | TACCGTATTTTATTT TCGTAT CGA ATACGA TTTCAGATAACTATA glyS 22156 - 24243 + | glycine-tRNA synthetase, beta subunit sodA 24971 - 24354 - | superoxide dismutase (Mn) TERM 26 25091 - 25034 - H 100 -16.4 -3.89182 | opp_overlap 25041 25049 TAAGAACAATTTAAA TTATACATTTATTAATAAATAATGTA TACAAG TAGATTATTTATTAATAAATGTATAA AAATAATTGCGTTAT TERM 27 25041 - 25084 + H 76 -9.4 -2.89039 | opp_overlap 25034, overlap 25049 AATTTAAATTATACA TTTATTAATAAATAATGTAT ACAA GTAGATTATTTATTAATAAA TGTATAAAAATAATT TERM 28 25478 - 25459 - H 86 -8 -4.86861 | opp_overlap 25459 TAATAAATAAATAAA TGTATATC ATCA GATATACA TGTGTCCCGTTTAGA TERM 29 26030 - 26017 - g 87 -2.5 -6.48081 | CCCAGAAAAAAAAAA TATAT GCAT ATATA ACTTCTAGATTGTCC prlC 25566 - 27638 + | oligopeptidase A TERM 30 27991 - 27957 - T 74 -6 -4.4017 | opp_overlap 27956 27957 TTAATGCTTACAAAA TTCTTCATTTTAAA AATATCA TTTGAAATGAAGAA CTTTCTTTTTAATAA TERM 31 27957 - 27991 + T 72 -8.2 -3.54027 | opp_overlap 27957, overlap 27956 TTAATGCTTACAAAA TTCTTCATTTTAAA AATATCA TTTGAAATGAAGAA CTTTCTTTTTAATAA pitA 29686 - 28064 - | inorganic phosphate transporter TERM 32 30082 - 30066 - g 79 -6.6 -4.72272 | opp_overlap 30048, overlap 30079 TTTTTTTATCAAAAA GTGCTA TAATT TAGCAC AGTTAATGCGCATTA ubiA 30037 - 30909 + | 4-hydroxybenzoate octaprenyltransferase zur 31668 - 31195 - | Zn transport system transcriptional repressor TERM 33 31237 - 31249 + g 73 -9.1 -2.92192 | AAGGGTAATACATTT CGGAC ATA GTCCG TGTGCTTCAATAACA dnaB 32173 - 33588 + | replicative DNA helicase TERM 34 33787 - 33803 + F 73 -6.7 -4.258 | opp_overlap 33782 33780, overlap 33782 33780 CTATTATATATTTAT TGTAAAT ATG ATTTACA TTTGTTCATAAATAC ssb 34030 - 34521 + | ssDNA-binding protein controls activity of RecBCD nuclease TERM 35 34795 - 34833 + F 83 -10.6 -2.75064 | opp_overlap 34816 34819, overlap 34798 ATATCTAGGATGTTG CGATCAGTATAGTATT ACATATC AGTACTATACTGATTG TACTTAAATAACAAA TERM 36 34798 - 34830 + F 75 -8.7 -3.52652 | opp_overlap 34816 34819, overlap 34795 TCTAGGATGTTGCGA TCAGTATAGTATT ACATATC AGTACTATACTGA TTGTACTTAAATAAC TERM 37 35156 - 35182 + G 83 -8 -4.2528 | overlap 35154 GTTTCAAATGCCATT GCCTCTCATGCA AAT TGTATTAGGGGC TTTATTAGCTTGGCC yjcE 35067 - 36710 + | CPA1 family Na+/H+ antiporter TERM 38 37137 - 37167 + F 84 -5.6 -5.42198 | gap 1, opp_overlap 37137 TCAGTATATATATTA CTCAATGCA-CAT AAAAAG ATGTTGCGTTGAG TTTTGTTTTTTCAAG TERM 39 37531 - 37548 + G 95 -8.5 -5.16841 | TGATCACGACATTTC TTTCTCC AGCT GGAGAAA TTTTTATTCGTATGA TERM 40 38291 - 38272 - g 74 -2.9 -5.39721 | gap 1, overlap 38274 38277 GTATTATAGAAAAAA TGGAAGCT TATGG AGCT-CCA TCAACTATCACTGGA gltP 37404 - 38693 + | glutamate/aspartate:proton symporter TERM 41 38783 - 38763 - T 79 -9.9 -2.82516 | opp_overlap 38762 TTTGGTATTATCAGA TCTTTCTTT TTG AAAGAAAGA ATGTATGCAATAATG yjgF 39410 - 39009 - | putative translation initiation inhibitor TERM 42 39285 - 39336 + g 100 -18.4 -3.92267 | opp_overlap 39275 39290, overlap 39275 39271 39287 GTAAATGTTGTCGGG GATAACATTTGTATCTGGGCGCAT TCCT ATTTGCCCAGATACAAATGTTATG TTTCCTATGTCTATC TERM 43 39287 - 39334 + g 100 -21 -3.54089 | opp_overlap 39275 39290, overlap 39275 39271 39285 AAATGTTGTCGGGGA TAACATTTGTATCTGGGCGCAT TCCT ATTTGCCCAGATACAAATGTTA TGTTTCCTATGTCTA TERM 44 39331 - 39290 - G 100 -16.1 -3.28712 | opp_overlap 39275 39271 39287 39285, overlap 39275 TGTTGTCGGGGATAA CATTTGTATCTGGGCGCAT TCCT ATTTGCCCAGATACAAATG TTATGTTTCCTATGT TERM 45 39474 - 39494 + r 71 -8.5 -2.54841 | opp_overlap 39474, overlap 39477 TATTTATATAAAAAA TAATAGAAT CCT ATTCTATTA CTATTGATTAAAATT TERM 46 39494 - 39474 - R 100 -8.5 -5.38047 | opp_overlap 39474 39477 TATTTATATAAAAAA TAATAGAAT CCT ATTCTATTA CTATTGATTAAAATT argI 40520 - 39495 - | ornithine carbamoyltransferase subunit I valS 43662 - 40789 - | valine tRNA synthetase TERM 47 43568 - 43588 + g 83 -10.5 -3.03635 | TGAGATGTATTTCCA TGGGGACTA AAG TAGTCTCCA TATTCCCAAAATTTA holC 44111 - 43659 - | DNA polymerase III, chi subunit TERM 48 44124 - 44169 + r 76 -9.5 -2.85238 | opp_overlap 44123 44122 44140, overlap 44122 44122 CATATGTTATTAATT TTTATTATTTTTATAATCAAT GATA ATTGATTATAAAAATAAAATA TAAATTTATTTTGGT pepA 45737 - 44226 - | cytosol aminopeptidase TERM 49 44310 - 44252 - G 100 -15.7 -3.19463 | gap 1, opp_overlap 44270, overlap 44257 44259 44270 GGGATGATCTATTAA TCAGATATTGTGATAAAAGCGCAACGGG TCGA CCTGTTGCGCTTTTATCACAATAA-TCA GATATCCATGCTGTT TERM 50 44306 - 44257 - G 100 -26.9 -2.94199 | opp_overlap 44270, overlap 44252 44259 44270 GATCTATTAATCAGA TATTGTGATAAAAGCGCAACGGG TCGA CCTGTTGCGCTTTTATCACAATA ATCAGATATCCATGC TERM 51 44304 - 44259 - G 100 -25.1 -3.02096 | opp_overlap 44270, overlap 44257 44252 44270 TCTATTAATCAGATA TTGTGATAAAAGCGCAACGGG TCGA CCTGTTGCGCTTTTATCACAA TAATCAGATATCCAT TERM 52 44270 - 44293 + g 100 -14.6 -4.3898 | opp_overlap 44259 44257 44252 44270 GATATTGTGATAAAA GCGCAACGGG TCGA CCTGTTGCGC TTTTATCACAATAAT TERM 53 44293 - 44270 - G 100 -12.4 -4.39426 | opp_overlap 44270, overlap 44259 44257 44252 GATATTGTGATAAAA GCGCAACGGG TCGA CCTGTTGCGC TTTTATCACAATAAT TERM 54 46515 - 46495 - g 77 -4.1 -5.48163 | overlap 46497 AAATAAATTAAAAAA TGTGTTTTT GTC AAAAACAAA TCCAGATAAAGATAA yjgP 45983 - 47104 + | putative transmembrane protein, transport TERM 55 47682 - 47670 - g 79 -4.9 -5.25805 | AAGAAAGCTAAAAAA GATAT GTT ATATC GAACGGGCAGTGTTT yjgQ 47110 - 48183 + | putative transmembrane protein, transport yidZ 49116 - 48217 - | transcriptional regulator BPEN_040 49993 - 50130 + | hypothetical protein znuC 50149 - 50796 + | high-affinity Zn ABC transporter ATP-binding protein TERM 56 51719 - 51749 + G 100 -10.1 -5.66989 | GCAGGAATAGAGGTA TTTTATTTTTTGT TATAT ACAAAAAATAAAA TTTTTTTCGTGTTTA znuB 50887 - 51747 + | high-affinity Zn ABC transporter membrane protein TERM 57 52137 - 52123 - T 91 -5.8 -5.76949 | TATTTGTAAAAAAAA TAACTA TTC TAGTTA AAGTAGTGCTAATTT TERM 58 52191 - 52203 + T 76 -4.9 -5.20534 | TATTTAAAATATCAT CAATT TAT AATTG TTTTTCTTGATTACT TERM 59 52388 - 52409 + T 81 -7.5 -4.67173 | opp_overlap 52388 52397 52406, overlap 52392 TTAATTTACATGATA TTTGTAATA TGTA TATTACAAA TTATTTTTTAAATTA TERM 60 52392 - 52412 + T 70 -4.1 -5.2166 | opp_overlap 52388 52397 52406, overlap 52388 TTTACATGATATTTG TAATATGTA TAT TACAAATTA TTTTTTAAATTATTC yhbG 53231 - 52506 - | ABC transporter ATP-binding protein yhbN 53786 - 53277 - | ABC transporter periplasmic substrate-binding protein yrbK 54381 - 53764 - | hypothetical protein TERM 61 54646 - 54658 + H 79 -3.5 -6.04953 | AATATTGTTGGCATA TTATA TTA TATAA TTTTTTTGTTTCTGT TERM 62 56274 - 56293 + H 71 -2.2 -5.74684 | opp_overlap 56276, overlap 56262 56276 CAGTTAATTATATGA TAGATTAT ATAA ATAATCAA TTTTTATTTTTATTA yrbA 56953 - 57222 + | BolA family transcriptional regulator murA 57272 - 58537 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase degQ 60199 - 58826 - | serine protease TERM 63 60430 - 60441 + r 71 -3 -5.66338 | GTTTCCTTATATTAT TCAT TATC ATGA TTTTTTATTGTATTT yhcB 60824 - 60426 - | hypothetical protein rplM 61354 - 61788 + | 50S ribosomal protein L13 TERM 64 62005 - 61985 - g 72 -8.5 -3.08032 | opp_overlap 61984 61983 61989, overlap 61982 61989 GGCCTTTGAAAATTA CTAATTTAT TAG ATAAATTAG ATATATATATTACTG rpsI 61816 - 62214 + | 30S ribosomal subunit protein S9 TERM 65 62979 - 62995 + T 77 -8.1 -4.06335 | overlap 62968 ATAGGGTGATGTTAT TACCATT TTT AATGGTA TTGTTAATTTTTGTT TERM 66 63040 - 63018 - T 85 -10.8 -3.33696 | opp_overlap 63016 63014 63023 TTTTTGTTTAATTAA TTAGATGAAT TTT ATTCATCTAA TATGGGTTTATGTAT TERM 67 63177 - 63197 + T 77 -5.5 -5.03409 | overlap 63179 TAAATTTAATAAGTG TATCCTTAT TCC ATAAGGACA TTATTTTTTTTGTAA yraP 64299 - 63709 - | putative periplasmic protein TERM 68 63957 - 63967 + g 77 -4 -5.5074 | TATCTTGACGAATTG CATT ATA AATG TTTTTTGTTCCATTA yraL 64871 - 65764 + | hypothetical protein TERM 69 66326 - 66306 - f 71 -8.5 -2.66695 | opp_overlap 66279, overlap 66285 66305 66303 66308 TTCTTCAGGAAAGAT TATCTAAAT TGT ATTTAGATA GTAATCAAAATTACA TERM 70 66570 - 66550 - f 70 -7.7 -3.42088 | opp_overlap 66548 66550 66552, overlap 66548 66546 GAAGATATAAATAGA TATCAACAT TAT ATGCTGATA TGCTTTATAAAAAAT yqjA 66815 - 67381 + | hypothetical protein TERM 71 67409 - 67389 - T 73 -4.1 -5.49234 | ATATGTAATAAAAAA CTAATTATT ATC AATAATAAG AGAAATGTAGGGTTT TERM 72 67741 - 67721 - T 77 -5.6 -4.9448 | opp_overlap 67719 67721 67721 ATTCATTAAATAAAA TATTATGT TACAT ACATAATA TAATATTTTTTATTA rpoD 69782 - 67947 - | RNA polymerase sigma-70 factor dnaG 71701 - 69956 - | DNA primase TERM 73 70481 - 70500 + g 72 -2.8 -5.50499 | TTGCAGTAAACATAA TTTCAGTG TTTG CCCTGGAA TTTTTTTAAGTATAG TERM 74 71286 - 71305 + g 81 -3 -5.86332 | CCACGATTTTTCAAA TATTTGTA AGCG TATAAATA TTTTTTTTGGGTTAA rpsU 72076 - 71861 - | 30S ribosomal subunit protein S21 gcp 72239 - 73264 + | putative O-sialoglycoprotein endopeptidase ygiH 73876 - 73289 - | hypothetical protein folB 73996 - 74379 + | dihydroneopterin aldolase, also has dihydroneopterin triphosphate bacA 74475 - 75359 + | bacitracin resistance protein cca 76849 - 75623 - | tRNA CCA-pyrophosphorylase TERM 75 76002 - 76024 + g 76 -6.4 -4.58424 | opp_overlap 76002 AATCTATTGCATAAA TTGTGAATTA AAG TAATTCCCAA TTTTCTGTGATCATG hldE 77297 - 78730 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase ribB 79574 - 80218 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase plsC 80554 - 81291 + | 1-acyl-glycerol-3-phosphate acyltransferase TERM 76 81345 - 81357 + T 74 -6.3 -4.40298 | TTGGAGGAGTGGATA CGATT TTT AATCG TTTGTTAGTTTGAAT metC 82662 - 81475 - | beta-cystathionase TERM 77 82973 - 83008 + r 100 -19.4 -5.24129 | opp_overlap 82973 82965 TTTGAAATTATTTAA TTACCATACCTCTTAT TAAT ATAAGAGGTATGGTAA TTTTTTCTAAAAGAA TERM 78 83008 - 82973 - R 100 -19.4 -3.1634 | opp_overlap 82973, overlap 82965 TTTGAAATTATTTAA TTACCATACCTCTTAT TAAT ATAAGAGGTATGGTAA TTTTTTCTAAAAGAA TERM 79 83597 - 83613 + r 70 -5.3 -4.88711 | opp_overlap 83597 83599 TTAATTGTTATTGAA TATAATT ACA AATTATA TTTTTAATGTGTTAT cutA 84987 - 84670 - | periplasmic divalent cation tolerance protein groES 85399 - 85692 + | co-chaperonin GroES groEL 85742 - 87379 + | chaperonin GroEL TERM 80 87454 - 87401 - f 100 -34.5 -3.42574 | opp_overlap 87401 87410 87414, overlap 87410 87414 TCAATTCTACTATAA TCACTGAAACAAACAACCCTGATCT AATT AGATCAGGGTTGTTTGTTTCAGTGA TTATAGTAGAATGTT TERM 81 87401 - 87454 + F 100 -34.5 -3.42346 | opp_overlap 87401 87410 87414, overlap 87410 87414 TCAATTCTACTATAA TCACTGAAACAAACAACCCTGATCT AATT AGATCAGGGTTGTTTGTTTCAGTGA TTATAGTAGAATGTT TERM 82 87445 - 87410 - f 100 -22.2 -3.72984 | opp_overlap 87410 87401 87414, overlap 87401 87414 CTATAATCACTGAAA CAAACAACCCTGATCT AATT AGATCAGGGTTGTTTG TTTCAGTGATTATAG TERM 83 87410 - 87445 + F 100 -22.2 -3.72984 | opp_overlap 87401 87410 87414, overlap 87401 87414 CTATAATCACTGAAA CAAACAACCCTGATCT AATT AGATCAGGGTTGTTTG TTTCAGTGATTATAG TERM 84 87441 - 87414 - f 100 -17.2 -4.47786 | opp_overlap 87414 87410 87401, overlap 87410 87401 AATCACTGAAACAAA CAACCCTGATCT AATT AGATCAGGGTTG TTTGTTTCAGTGATT TERM 85 87414 - 87441 + F 100 -17.2 -4.47786 | opp_overlap 87410 87401 87414, overlap 87410 87401 AATCACTGAAACAAA CAACCCTGATCT AATT AGATCAGGGTTG TTTGTTTCAGTGATT TERM 86 87799 - 87785 - g 70 -6.4 -4.19974 | AAAATTTTGAAGAAA TCGCAG TTG CTGCAA AAATAATAGGAACGA efp 87508 - 88074 + | elongation factor P yjeP 91480 - 88088 - | hypothetical protein TERM 87 88593 - 88606 + g 71 -5.3 -4.57837 | ATAGTTACGGTGTCG CCAAT ACGA ATTGG TTTTTCAAACAGTAT TERM 88 91344 - 91354 + g 82 -2.6 -6.08342 | TCTTTTTGCTGCGCA TATT GTA AATA TTTTTTTATTTCTTG TERM 89 91455 - 91443 - G 93 -3.5 -6.36459 | opp_overlap 91443 GTCAATAAAAAAAAA TATTT AAA AAATA TAGTTTTCTTTTGAA psd 92424 - 91537 - | phosphatidylserine decarboxylase proenzyme TERM 90 92985 - 92937 - H 75 -8.6 -3.48276 | gap 1, opp_overlap 92945, overlap 92939 92947 TGTGTGTTTACAGAA TATGTTAATATCAGTCTACAATT TTAA AATTGTAGACTGATATTTAT-TA GCGTTATATGCAAAC TERM 91 92984 - 92939 - H 76 -9.3 -3.31726 | opp_overlap 92945, overlap 92937 92947 TGTGTTTACAGAATA TGTTAATATCAGTCTACAATT TTAA AATTGTAGACTGATATTTATT AGCGTTATATGCAAA TERM 92 92945 - 92978 + H 100 -17.1 -4.21989 | opp_overlap 92939 92937 92947 TACAGAATATGTTAA TATCAGTCTACAATT TTAA AATTGTAGACTGATA TTTATTAGCGTTATA TERM 93 92976 - 92947 - H 100 -15.3 -3.10474 | opp_overlap 92945, overlap 92939 92937 CAGAATATGTTAATA TCAGTCTACAATT TTAA AATTGTAGACTGA TATTTATTAGCGTTA orn 93133 - 93696 + | oligoribonuclease TERM 94 93869 - 93853 - f 75 -9.5 -2.62616 | overlap 93856 TCAGTTGGGAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCAA TERM 95 94178 - 94227 + F 74 -6.2 -4.52047 | gap 1, overlap 94182 94183 GATTAGACATTTATT TGCTCTTACTCTTTATATCAA ATTACAACA TTGATATAAAGAGTAA-ATCA TTTTCTGGTATAATC TERM 96 94182 - 94224 + F 71 -8.1 -3.21099 | overlap 94178 94183 AGACATTTATTTGCT CTTACTCTTTATATCAA ATTACAACA TTGATATAAAGAGTAAA TCATTTTCTGGTATA TERM 97 94183 - 94223 + F 85 -11.6 -2.51936 | overlap 94182 94178 GACATTTATTTGCTC TTACTCTTTATATCAA ATTACAACA TTGATATAAAGAGTAA ATCATTTTCTGGTAT yjeE 94487 - 94975 + | nucleoside triP hydrolase domain-containing protein TERM 98 95001 - 94984 - g 76 -7.1 -4.30014 | CGCATGAAGTTAAAA TACGAAA TAAT TTTCGTA ATGACAATATTTTCA TERM 99 95623 - 95610 - g 75 -2.5 -5.62219 | AATATATGAAAAAAA TATTA CAAT TAATA TAGCTAAAAAACTAA amiB 94972 - 96243 + | N-acetylmuramoyl-L-alanine amidase miaA 96505 - 97419 + | delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase hfq 97510 - 97755 + | host factor I TERM 100 97876 - 97859 - f 71 -7.1 -3.94276 | AAAATATGTGATAAA TTCATCA TATT TGATGAA ATAAGTATAACTTAT TERM 101 97999 - 97989 - g 77 -4 -5.48028 | opp_overlap 97989 TAAAGAAAAACAAAA TGAA AAT TTCA ATTTACAGGAATTTT hflX 97918 - 99204 + | hypothetical protein TERM 102 99387 - 99362 - g 76 -6.3 -4.57503 | opp_overlap 99358, overlap 99358 GAAGATAAGAATAAA TCTGAATTTAA TATA TTAGATTCAGA TAAATATTTGAATAA hflK 99260 - 100555 + | HflK TERM 103 100590 - 100603 + G 85 -2.5 -6.11392 | CATTTGTTATATGTG TAATA GTAA TATTA TTTTTTTCTTTATTT TERM 104 101431 - 101443 + G 76 -6.3 -4.63172 | TGCTACTACTTTTAA TGAAG ACC CTTCA TTTTATGCTTTAGTA hflC 100556 - 101584 + | FtsH protease regulator HflC TERM 105 101891 - 101862 - g 100 -13.1 -3.30159 | gap 1, overlap 101886 TCAAGGGGGTCACAA TGCTGGTCATACTA TTG TAGTA-GACCAGCA GAAAATAACTCTACA TERM 106 102860 - 102808 - g 78 -6.8 -4.52505 | opp_overlap 102810 102819, overlap 102801 102812 AAGAAAAATGGAAAA GTA-ATACACAATTTTCCATGTTCTT TGG AAGAAC-TAGAAAATTGTGTACCTAT ATACGAAATATTACC TERM 107 102855 - 102812 - g 100 -15.8 -3.74303 | gap 1, opp_overlap 102810 102819, overlap 102801 102808 AAAATGGAAAAGTAA TACACAATTTTCCATGTTCTT TGG AAGAAC-TAGAAAATTGTGTA CCTATATACGAAATA purA 101746 - 103044 + | adenylosuccinate synthetase rlmB 103280 - 104023 + | tRNA/rRNA methyltransferase TERM 108 104346 - 104369 + G 86 -9.8 -3.96156 | opp_overlap 104349 104352, overlap 104344 104349 104352 ATTAGCATATCCAGT TAATAAGCTT TGTA AAGCTTATTA TGTTTTATTAAATAT TERM 109 104349 - 104366 + G 74 -7.1 -4.0865 | opp_overlap 104349 104352, overlap 104346 104344 104352 AGCATATCCAGTTAA TAAGCTT TGTA AAGCTTA TTATGTTTTATTAAA rpsF 104194 - 104547 + | 30S ribosomal subunit protein S6 rpsR 104772 - 105011 + | 30S ribosomal protein S18 rplI 105066 - 105527 + | 50S ribosomal protein L9 TERM 110 106477 - 106488 + G 72 -7.2 -3.77722 | opp_overlap 106477 ATGTAATAGCTAGAA CGGC TGGC GCCG TTGTTAATGATTGGA cysQ 105822 - 106577 + | CysQ TERM 111 106590 - 106638 + F 95 -11.6 -4.06778 | opp_overlap 106596, overlap 106592 TGATTGATTATATTG TATTAATAGTAATTATTTATAT TAATT AAATAAATAATTACTATTAATG TTTGGATTTTTTAAT TERM 112 106592 - 106636 + F 93 -12 -3.60569 | opp_overlap 106596, overlap 106590 ATTGATTATATTGTA TTAATAGTAATTATTTATAT TAATT AAATAAATAATTACTATTAA TGTTTGGATTTTTTA TERM 113 106632 - 106596 - f 73 -8.4 -3.17941 | opp_overlap 106592 106590 ATTATATTGTATTAA TAGTAATTATTTATAT TAATT AAATAAATAATTACTA TTAATGTTTGGATTT ytfM 106992 - 108754 + | putative outer membrane protein TERM 114 111825 - 111794 - g 70 -6.2 -4.1821 | gap 1, opp_overlap 111803, overlap 111792 111797 AGTATTCAAAAAATA TAACAAATATTTCTT CAG AAGAAAT-TTTGCTA GATGATAATCTCCAA ytfN 108751 - 112590 + | hypothetical protein ppa 113199 - 112666 - | inorganic pyrophosphatase ispB 114367 - 113396 - | octaprenyl-diphosphate synthase TERM 115 114477 - 114488 + H 82 -3 -6.19443 | TAAATTTTATTATTG TGTT GAGA AACA TTTTTTTTTAATGTA rplU 114559 - 114876 + | 50S ribosomal protein L21 rpmA 114922 - 115176 + | 50S ribosomal protein L27 TERM 116 116036 - 115980 - g 83 -10.6 -3.05562 | gap 1, opp_overlap 115984 115986, overlap 115985 115994 116007 ACAAATGGGTCAACA GGAGAGTTCCAACATTTGCTATTAGAA TTGC TTCTAATAGCAAATGTTGGAA-TATTT GGATTACCTAATTCT TERM 117 115984 - 116033 + G 100 -20.5 -3.77219 | opp_overlap 115980 115985 115994 116007, overlap 115986 ATGGGTCAACAGGAG AGTTCCAACATTTGCTATTAGAA TTGC TTCTAATAGCAAATGTTGGAATA TTTGGATTACCTAAT TERM 118 116032 - 115985 - g 100 -21.8 -2.9155 | opp_overlap 115984 115986, overlap 115980 115994 116007 TGGGTCAACAGGAGA GTTCCAACATTTGCTATTAGAA TTGC TTCTAATAGCAAATGTTGGAAT ATTTGGATTACCTAA TERM 119 115986 - 116031 + G 100 -25.3 -3.46783 | opp_overlap 115985 115980 115994 116007, overlap 115984 GGGTCAACAGGAGAG TTCCAACATTTGCTATTAGAA TTGC TTCTAATAGCAAATGTTGGAA TATTTGGATTACCTA TERM 120 116023 - 115994 - g 100 -13.9 -3.05521 | opp_overlap 115986 115984, overlap 115985 115980 116007 AGGAGAGTTCCAACA TTTGCTATTAGAA TTGC TTCTAATAGCAAA TGTTGGAATATTTGG TERM 121 116417 - 116397 - g 71 -6.9 -3.96156 | overlap 116399 ATATTCAATAAAATA GACTTGTTG GAA CAACAAGTG GCGGAAAAAAGGATT TERM 122 116415 - 116399 - g 80 -9.5 -3.55864 | overlap 116397 ATTCAATAAAATAGA CTTGTTG GAA CAACAAG TGGCGGAAAAAAGGA obgE 115536 - 116558 + | GTPase ObgE greA 116889 - 117365 + | transcription elongation factor TERM 123 117920 - 117942 + G 73 -9.1 -2.87931 | overlap 117922 TAATAGATTTGGGAT CAGCGCCTG GCGGG TGGGCGCTG TATGTAAAAAGTAAA rrmJ 117742 - 118368 + | ribosomal RNA large subunit (23S) methyltransferase J TERM 124 118895 - 118884 - g 71 -2.2 -5.37171 | AAGATCAAATAAAAA CTAC TTTT GCAG ATGTGGCAGGATGTG hflB 118442 - 120370 + | hypothetical protein folP 120501 - 121340 + | 7,8-dihydropteroate synthase mrsA 121354 - 122715 + | PGM/PMM-family protein secG 122862 - 123143 + | preprotein translocase, membrane component TERM 125 123222 - 123196 - f 71 -8.3 -3.32516 | overlap 123194 ACAAATTAATTAAGA TATCTTTTTAT ATGTA ATAAAAAGATA TAAAATATGTGTAAC TERM 126 123711 - 123731 + F 72 -8.5 -2.85238 | opp_overlap 123715, overlap 123706 123715 TGGTTAAATGTTTAG TTAATATTC AGA GAATATTAA TAGATTTCTTTTCAT nusA 124047 - 125564 + | transcription elongation factor NusA TERM 127 126326 - 126299 - g 79 -7 -4.64024 | AAATGAAAGAAGAAA TCGCTCTCGTGT GCGT ACACGATATCGA AATGGCGGGAAATTG TERM 128 127336 - 127326 - g 71 -6.8 -4.03234 | opp_overlap 127326 127321 TCTTTTTTAGATAAA GGAC GTG GTCC TGTAGTTGCTGTTCT infB 125595 - 128270 + | translation initiation factor IF2-2 rbfA 128361 - 128720 + | 30S ribosome-binding factor truB 128757 - 129539 + | tRNA pseudouridine 5S synthase rpsO 129869 - 130138 + | 30S ribosomal subunit protein S15 TERM 129 130520 - 130542 + G 85 -4.8 -5.52384 | overlap 130521 CAAGAACGCACTTAT GCTGCTGGAA AAT TTCCAGGAGG TTTTTTTCGTCGAGA TERM 130 130521 - 130541 + G 77 -8.3 -3.90707 | overlap 130520 AAGAACGCACTTATG CTGCTGGAA AAT TTCCAGGAG GTTTTTTTCGTCGAG TERM 131 130623 - 130633 + G 74 -6.8 -4.28111 | CTATTCGGCCGTTAT TCCC TAA GGGA TTTATTAATGATGTA TERM 132 131120 - 131108 - g 79 -4.8 -5.24129 | TTTTTTGATAAAAAA GAGC GTCAT GCTC AAGTTGATAGTATTA pnp 130316 - 132415 + | polynucleotide phosphorylase/polyadenylase TERM 133 132942 - 132966 + F 71 -2.9 -5.69068 | overlap 132942 132940 132944 ACTTTAATCCCTCTG TATGCATTCAT TGT ATGCATGTGTA TTTTTTGTGTTTTTA TERM 134 133301 - 133282 - g 71 -7.8 -3.51597 | AAGGTTTAATTATAA CGCCTACT CGAG AGTTGGCG ATACAAATTGGGAGA TERM 135 134175 - 134146 - g 77 -4.4 -5.19819 | opp_overlap 134146 AAATAAAACTAAAAA TTCCAGAGGT TCAGTATCCT ACCTCTGAAA CTTTATTTGATTGTC deaD 133041 - 134750 + | cold-shock DeaD box ATP-dependent RNA helicase TERM 136 135280 - 135294 + G 87 -10 -3.85817 | opp_overlap 135273 ATTAAAATGTGATAT TCACGC AAA GCGTGA TTTATGGCGACAAAT holD 134912 - 135334 + | DNA polymerase III, psi subunit TERM 137 135490 - 135478 - f 71 -3.5 -5.33026 | opp_overlap 135468 135487, overlap 135487 TAATGTAAATAAAAA TTTAT TAG ATAAA TAGAATTTATATCCT TERM 138 135662 - 135644 - f 74 -8.2 -3.71108 | overlap 135637 135661 AAAATTAATGTTAAA TGTGGTTC AAC AAACCACA CGATGCTTAAACGTG thrA 136300 - 138750 + | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 139 138876 - 138902 + G 100 -12.5 -4.06055 | AGCTTACTTGGAGAT TGCATTAGCAT CGAGC ATGCTAATGCA TTTAGTTTAAGAAGT thrB 138774 - 139712 + | homoserine kinase TERM 140 140108 - 140068 - g 95 -12.1 -3.71649 | opp_overlap 140074 140077 GGCGCAAATGTTAAA TCAGACTAACCATTGTTCT GAT AAACCAATGGTTATTCTGA CTGCTACTTCTGGAG TERM 141 140922 - 140896 - g 82 -2.4 -6.06723 | overlap 140898 TTTTTTAAAAAAAAA GATACAATTAAT ATT ACCAATTGTATT AAAAGAACGTATGAA thrC 139712 - 141013 + | threonine synthase TERM 142 142210 - 142230 + G 93 -11.3 -3.66883 | AATAGAATTATCTGC TTCACATCA AAC TGATGTGAA TTTACCGTATATTAC dnaK 141383 - 143296 + | hypothetical protein dnaJ 143420 - 144547 + | hypothetical protein rpsT 144883 - 144617 - | 30S ribosomal subunit protein S20 TERM 143 144974 - 145004 + H 74 -3.5 -5.65177 | gap 1, opp_overlap 144983, overlap 144981 144997 AATTATTATTTGTTA TTTTCA-ACATGAT TACT ATCATGTTTGTAAA TTTTTTTATAAATCT ribF 145136 - 146110 + | bifunctional: flavokinase; FAD synthetase TERM 144 148542 - 148519 - g 74 -6.8 -4.22338 | opp_overlap 148518, overlap 148523 AGCATAAGTTCAAAA CAAATCATGA ATAG TCATGATTGG AATACTTTTTTAAAT TERM 145 148538 - 148523 - g 76 -6.2 -4.68655 | opp_overlap 148518, overlap 148519 TAAGTTCAAAACAAA TCATGA ATAG TCATGA TTGGAATACTTTTTT ileS 146107 - 148935 + | isoleucyl-tRNA synthetase TERM 146 149320 - 149347 + G 72 -8.6 -3.05343 | opp_overlap 149327, overlap 149326 149327 TTATTGATGTTCACA TTAAAAATTGGC ATTG GCCAACTTTTAA TGTTGCAGATATAGC TERM 147 149340 - 149327 - g 83 -6.7 -4.8048 | opp_overlap 149327 149326 149320 TGTTCACATTAAAAA TTGGC ATTG GCCAA CTTTTAATGTTGCAG lspA 148935 - 149432 + | prolipoprotein signal peptidase TERM 148 149697 - 149729 + G 77 -10.1 -2.68823 | opp_overlap 149700, overlap 149685 149684 149696 AATTTATGTGCGACA TGAGTTAGTACATAA CGA TTATGTGGTAACTCA GTTATCTAAGAAAGG ispH 149587 - 150522 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein dapB 150726 - 151574 + | dihydrodipicolinate reductase TERM 149 151668 - 151702 + F 100 -11.8 -4.35116 | opp_overlap 151668 151673, overlap 151673 151700 GAGACTAATAATAAA TAAAACATGTATAAAT TTT ATTTACACATGTTTTA TTTTAATCTAAAATA TERM 150 151702 - 151668 - f 100 -14 -4.5032 | opp_overlap 151668 151673 151700, overlap 151673 GAGACTAATAATAAA TAAAACATGTATAAAT TTT ATTTACACATGTTTTA TTTTAATCTAAAATA TERM 151 151673 - 151697 + F 87 -7.3 -5.16132 | opp_overlap 151668 151673, overlap 151668 TAATAATAAATAAAA CATGTATAAAT TTT ATTTACACATG TTTTATTTTAATCTA TERM 152 151697 - 151673 - f 100 -9.5 -5.18297 | opp_overlap 151673 151668, overlap 151668 TAATAATAAATAAAA CATGTATAAAT TTT ATTTACACATG TTTTATTTTAATCTA carA 151822 - 152961 + | carbamoyl phosphate synthase small subunit TERM 153 155118 - 155103 - g 70 -4 -4.97888 | AAAAAAAGCTAAAAA TATAGG GTAC CCCATA GTAGTCAGGCCTTCT carB 152983 - 156210 + | carbamoyl-phosphate synthase, large chain folA 156320 - 156814 + | dihydrofolate reductase type I apaH 157795 - 156974 - | diadenosine tetraphosphatase TERM 154 157182 - 157201 + g 74 -6.4 -4.46775 | gap 1 GGATATATATTTTTT GGGGCATCC TTA GGA-GCTCC TTTGTATTTTAAATC TERM 155 157296 - 157319 + g 87 -11.2 -3.50893 | opp_overlap 157290 157316, overlap 157316 TTTAATTTATTATTA TGTATCTGAT ATGT ATCAGATACA TTGTCATGTATGCTT ksgA 158991 - 158188 - | dimethyladenosine transferase pdxA 159991 - 158972 - | pyridoxine phosphate biosynthetic protein PdxJ-PdxA subunit, NAD-dependent dehydrogenase/carboxylase TERM 156 159256 - 159270 + g 81 -2.2 -5.95539 | CTGACAAAGGACCTA TTAGTT CAC AATTAA TTTTTTTCTTTAAAA TERM 157 159566 - 159583 + g 71 -8.5 -2.83953 | opp_overlap 159566, overlap 159563 GATTTGAGATAAAAA TTCAGTG TGCC CACTGAA TGCTATGTTTCCTTT TERM 158 159583 - 159566 - G 95 -8.5 -4.9792 | opp_overlap 159566 159563 GATTTGAGATAAAAA TTCAGTG TGCC CACTGAA TGCTATGTTTCCTTT surA 161270 - 159993 - | peptidyl-prolyl cis-trans isomerase imp 163669 - 161321 - | organic solvent tolerance protein precursor TERM 159 162271 - 162284 + g 75 -2.5 -5.64274 | GATATTGTGTTCTGT TATAA TGAT TTATA TTTTTTTGTCGATAA leuD 164867 - 164259 - | isopropylmalate isomerase small subunit leuC 166292 - 164892 - | isopropylmalate isomerase large subunit TERM 160 164958 - 164919 - G 100 -20.8 -3.9777 | opp_overlap 164930, overlap 164920 TCGAATATCTACAAA GCGTCCAGCAATGGCGGC GGCG GCCGCCATTGCTGGACTA ACTAAATGAGTACGA TERM 161 164957 - 164920 - G 100 -24.3 -2.9818 | opp_overlap 164930, overlap 164919 CGAATATCTACAAAG CGTCCAGCAATGGCGGC GGCG GCCGCCATTGCTGGACT AACTAAATGAGTACG TERM 162 164930 - 164947 + g 100 -12.7 -3.16881 | opp_overlap 164920 164919 CAAAGCGTCCAGCAA TGGCGGC GGCG GCCGCCA TTGCTGGACTAACTA leuB 167394 - 166294 - | 3-isopropylmalate dehydrogenase leuA 168971 - 167418 - | 2-isopropylmalate synthase TERM 163 169184 - 169212 + H 93 -6.9 -5.3236 | TTTAAGATTGATTTT TTGTGTTATCATC ATC GATGATAATAAAA TTTTTTATGAGTTGT TERM 164 170003 - 169980 - g 72 -8.9 -2.72324 | overlap 169979 169975 TTTATCGAAATTAAT CTGCGATGC TATTCC GCATCGCAA TATGAATAAACATCC mraW 169378 - 170367 + | S-adenosyl-dependent methyl transferase ftsL 170370 - 170684 + | cell division protein TERM 165 170714 - 170694 - f 79 -7.1 -4.48221 | opp_overlap 170693 TACTAATCTATAAAA TTTATTTAT GTG ATAAATAAA AATATTATTTGAAAA ftsI 170769 - 172463 + | division-specific transpeptidase murE 172499 - 174010 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase TERM 166 174512 - 174484 - g 100 -13.3 -2.77235 | opp_overlap 174488 174491, overlap 174488 174491 GCAATTATCGAATTA GGAACAAGTTCTC CTG GAGAACTTGTTCA ATTAAGTAAGATAGT TERM 167 174488 - 174508 + G 100 -12.7 -3.19192 | opp_overlap 174484 174488 174491, overlap 174491 TTATCGAATTAGGAA CAAGTTCTC CTG GAGAACTTG TTCAATTAAGTAAGA TERM 168 174508 - 174488 - g 100 -12.7 -3.2827 | opp_overlap 174488 174491, overlap 174484 174491 TTATCGAATTAGGAA CAAGTTCTC CTG GAGAACTTG TTCAATTAAGTAAGA TERM 169 174491 - 174505 + G 77 -8.6 -3.73783 | opp_overlap 174488 174484 174491, overlap 174488 TCGAATTAGGAACAA GTTCTC CTG GAGAAC TTGTTCAATTAAGTA TERM 170 174505 - 174491 - g 79 -8.6 -3.77722 | opp_overlap 174491 174488, overlap 174488 174484 TCGAATTAGGAACAA GTTCTC CTG GAGAAC TTGTTCAATTAAGTA murF 174007 - 175380 + | D-alanine:D-alanine-adding enzyme mraY 175365 - 176453 + | phospho-N-acetylmuramoyl-pentapeptide transferase murD 176458 - 177780 + | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase ftsW 177780 - 178976 + | cell division protein TERM 171 179730 - 179711 - g 100 -13.6 -2.95298 | opp_overlap 179707 179705 TTTATTGATGATATA GCCCAAGC ATAT GCTTGGGC AGATATATTGATATC murG 178973 - 180040 + | UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase murC 180099 - 181541 + | UDP-N-acetyl-muramate:alanine ligase TERM 172 181681 - 181656 - f 84 -11.3 -3.14344 | overlap 181658 GAGTGGGTTTACTAA TACACCTCAAT TAGG ATTGAGGTGCA TAACCGAGTGATAAT TERM 173 181679 - 181658 - f 86 -11.7 -3.13403 | overlap 181656 GTGGGTTTACTAATA CACCTCAAT TAGG ATTGAGGTG CATAACCGAGTGATA TERM 174 182309 - 182332 + G 77 -8.4 -3.9444 | opp_overlap 182309 182312, overlap 182312 AAAATTAGGTAGAAA TAATATAATC GAAC GATTATATTA TTTCATTAGAATTTA TERM 175 182332 - 182309 - g 79 -8.4 -3.96827 | opp_overlap 182309 182312, overlap 182312 AAAATTAGGTAGAAA TAATATAATC GAAC GATTATATTA TTTCATTAGAATTTA ftsQ 181677 - 182471 + | cell division protein TERM 176 182805 - 182781 - g 100 -13.1 -4.60487 | opp_overlap 182786 TATTAGTTGTAAAAA TGAAATAGGTA TGG TACCTATTTCA GAAGAGGAAGTGACA ftsA 182506 - 183762 + | cell division protein FtsA ftsZ 183838 - 185004 + | cell division protein FtsZ TERM 177 185187 - 185177 - g 70 -4 -5.04385 | opp_overlap 185177 CACACCGGTAAAAAA GTTA CGT TAAC TTTACGTCCTACTTC TERM 178 185605 - 185625 + G 86 -4 -5.85011 | opp_overlap 185608 CAATCATCCAGCTAT CAATGTGG ATACA CAACATTG TTTTTTTAATTTTTC lpxC 185108 - 186001 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 179 189251 - 189239 - g 76 -6.3 -4.73094 | opp_overlap 189237 189239 AACAGGAATACAAAA GAGAA TCA TTCTC TATGTTTACTAAAAT TERM 180 189353 - 189337 - g 81 -4.5 -5.4833 | overlap 189330 TTATTCAATAAAAAA GAATCTA TTT TAAATTC AACTAATAAATATAA secA 186811 - 189546 + | preprotein translocase subunit SecA TERM 181 189806 - 189836 + T 76 -4.9 -5.31456 | overlap 189809 189810 TTTTACGTGTTATTT CATTTACTAAAAA TAGTT TTTTTAGTAGTTG TTTTTTCTGCCTTAA coaE 190443 - 189805 - | dephospho-CoA kinase TERM 182 189946 - 189923 - G 75 -9.7 -2.85545 | TTTTCAATAACATTA TCAGCATAG TTTAAT CTATGCTGA CGGGATACTTGTGAT dksA 191027 - 191491 + | dosage-dependent dnaK suppressor protein folK 191738 - 192232 + | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase TERM 183 192261 - 192245 - T 70 -5.3 -4.86293 | TAATAAAAATGAAAA TATATAT ATT ATATATA GACTGTTGTATGTGT TERM 184 193347 - 193328 - T 84 -9.4 -3.93768 | overlap 193326 AGTTGTAATAAAAGA CCCTTATA TACT TATAAGGG ATGTGAAGATAAGAA TERM 185 193393 - 193432 + T 100 -18.4 -3.35644 | opp_overlap 193398, overlap 193398 CATACAAGCAGCACT TACAATATTTTCTCTTTA AAAC TAAAGAGAAAATATTGTA TCTTATAATTATGAG TERM 186 193398 - 193427 + T 95 -12.5 -3.74462 | opp_overlap 193398, overlap 193393 AAGCAGCACTTACAA TATTTTCTCTTTA AAAC TAAAGAGAAAATA TTGTATCTTATAATT TERM 187 193427 - 193398 - T 95 -12.5 -3.3854 | opp_overlap 193398 193393 AAGCAGCACTTACAA TATTTTCTCTTTA AAAC TAAAGAGAAAATA TTGTATCTTATAATT lpdA 195405 - 193981 - | dihydrolipoamide dehydrogenase, FAD/NAD(P)-binding, E3 component of the 2-oxoglutarate dehydrogenase and the pyruvate dehydrogenase complexes aceF 196888 - 195617 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 188 195913 - 195931 + g 91 -11.8 -3.43961 | ATTGATTCCCAGTAC GAGCTTTC TTT GAAAGCTC TTCTAACTCTTGTGA TERM 189 196697 - 196719 + g 70 -6.4 -4.26076 | AGATCCTGTATGTAC TTTATCTCCA ACA TGGACATAAA TTTTAGTAACAATAC aceE 199566 - 196900 - | pyruvate dehydrogenase subunit E1 TERM 190 200585 - 200605 + H 93 -8.5 -5.03405 | TAATAAGATCTATGT TATCTATAT ACA ATATAGATA TTTTTGTATCATATT TERM 191 201415 - 201429 + H 73 -5 -4.94811 | opp_overlap 201415, overlap 201411 GTAGGAAAATATATA TATGTG GTC CACGTA TTTATTTGTTTTTAA TERM 192 203271 - 203287 + G 77 -4.4 -5.20331 | opp_overlap 203271, overlap 203266 GATGTTTTAAAAAAA TTGGGC ATTTC GCCTAA TTTTATTTCTTCTTT TERM 193 203287 - 203271 - g 74 -2.9 -5.41143 | opp_overlap 203271 203266 GATGTTTTAAAAAAA TTGGGCA TTT CGCCTAA TTTTATTTCTTCTTT mrcB 201636 - 203972 + | penicillin-binding protein 1b yadR 204313 - 204666 + | iron-sulfur cluster insertion protein ErpA TERM 194 204690 - 204667 - f 86 -11.2 -3.32844 | opp_overlap 204667 TCTTTCAGTGTATAA GTATTTGTTG TGTA CAACAAATAC TTATACCAAATAGTC TERM 195 204667 - 204690 + F 86 -11.2 -3.30441 | opp_overlap 204667 TCTTTCAGTGTATAA GTATTTGTTG TGTA CAACAAATAC TTATACCAAATAGTC pyrG 205130 - 206776 + | CTP synthetase TERM 196 207661 - 207643 - g 71 -3.2 -5.16133 | opp_overlap 207643 AGTATAATATAAAAA GTGAAAAA AAG TTTTTTAC TTCTGAAGAATTTAC eno 206853 - 208151 + | enolase TERM 197 209869 - 209899 + G 81 -9.9 -3.11768 | opp_overlap 209870 209879 ATGCATCGTGTATCA ATTGCAATAACTC CGCAA GAGTTATTGCAAA TATTACGTCCTATGA TERM 198 209898 - 209870 - g 100 -14.1 -3.14931 | opp_overlap 209869, overlap 209879 TGCATCGTGTATCAA TTGCAATAACTCC GCA AGAGTTATTGCAA ATATTACGTCCTATG cysJ 208744 - 210564 + | sulfite reductase, alpha subunit (flavoprotein) TERM 199 210648 - 210636 - g 74 -4.1 -5.28481 | opp_overlap 210644 GAGCGAATCAAAAAA GAAAG CAA CTTCC TAAGAGGTACTATTG TERM 200 211176 - 211159 - g 100 -8.5 -5.83822 | TAGATTCAAAAAAAA CAGAATC TACA GATTCTG AGCCAATTTTAAGCG cysI 210564 - 212291 + | sulfite reductase subunit beta cysH 212284 - 213045 + | phosphoadenosine phosphosulfate reductase TERM 201 213446 - 213423 - g 100 -15.4 -3.91858 | opp_overlap 213442, overlap 213440 TACACATGCTACAAA GGGCCACTAT TACA ATAGTGGCCC CCGCCCTTTGTACAG TERM 202 214277 - 214299 + G 74 -7 -4.17023 | opp_overlap 214277, overlap 214289 214292 GGAGAGGAATTACAA GCAATATCGG AGG CAGGTATTGC TTTTCAAGTAGTTCC cysG 213326 - 214750 + | 1,3-dimethyluroporphyriongen III dehydrogenase cysD 214767 - 215681 + | sulfate adenylyltransferase subunit 2 TERM 203 215751 - 215777 + G 100 -13.8 -4.23615 | opp_overlap 215744 215742 GAAAATTATCTATAT GCGCAACAACAT AAA ACGTTGTTGCGC TTTCTTACATGTGGT cysN 215691 - 217121 + | ATP-sulfurylase, subunit 1 cysC 217135 - 217770 + | adenosine 5-phosphosulfate kinase TERM 204 217856 - 217883 + F 93 -8 -5.24799 | opp_overlap 217856 TATCTTTAGTAAAAA TTATTTTGTTTT AATA GAAACAAAATAA TTTTTATATTTATAA TERM 205 217883 - 217856 - f 79 -7.3 -4.72986 | opp_overlap 217856 TATCTTTAGTAAAAA TTATTTTGTTT TAATAG AAACAAAATAA TTTTTATATTTATAA ygbQ 218140 - 218415 + | cell division protein TERM 206 218805 - 218817 + G 73 -9.1 -2.98122 | overlap 218804 TGGGTTATTGTGCAT GACGC GGT GCGTC CTTGTTTACATCATG ispD 218487 - 219194 + | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase TERM 207 219207 - 219190 - f 71 -2.1 -5.75478 | gap 1 AATTATATAAAAAAA CTTAACAA GGA TTGT-AAG CATGTTACGTATTGG ispF 219209 - 219682 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 208 219758 - 219734 - f 76 -9.5 -2.90763 | opp_overlap 219723 219738, overlap 219738 219749 219751 TTCATAGTTCACATA TAAATCTATCA ATA CGATAGATTTA TCTAAGAATTATTTT TERM 209 220113 - 220103 - f 72 -2.6 -5.78622 | opp_overlap 220103 220106, overlap 220106 CGATTCTAAAAAAAA TATT AAA AATA ATTTTATTGTTGTAT TERM 210 220822 - 220798 - g 71 -2.3 -5.40474 | opp_overlap 220807 220811, overlap 220800 ATGCTTTTAAAAAAA TATTATTTTTT GTT AAAAAACAATT TTTTTATTCTAGTAC TERM 211 220807 - 220820 + G 86 -3.9 -5.89921 | opp_overlap 220800 220798, overlap 220811 AAAAAATATTATTTT TTGTT AAAA AACAA TTTTTTTATTCTAGT nlpD 220332 - 221285 + | lipoprotein NlpD precursor TERM 212 221944 - 221919 - f 91 -12.1 -3.53563 | opp_overlap 221908 ATACTTTTGCTTAAA TACTCATCTAT TATT ATAGATGAGTA TAAGAAAAAAATTAT alaS 222183 - 224822 + | alanyl-tRNA synthetase csrA 225010 - 225195 + | carbon storage regulator TERM 213 225390 - 225374 - f 71 -8.7 -2.52676 | opp_overlap 225374 GAGTGGCTGAAGGCA CTCCCCT GCT AAGGGAG TATATGGTTCTTAAC TERM 214 225496 - 225480 - f 71 -8.7 -2.70275 | overlap 225477 225492 CAATTGGACAGAGCA CTCGGCT ACG AACCGAG CGATCGGAGGTTCGA TERM 215 226764 - 226744 - g 74 -5.5 -4.80178 | opp_overlap 226744 226743 226747 226749, overlap 226739 GAGGAATTAATAAAA TAATAGGTA AAT TACCTCTTA ATTTAGGAGTAAACT TERM 216 227008 - 226997 - g 77 -3 -5.59962 | GAAAATAAATAAAAA TGAA ATAT TTCA AATGATACGTACATT ffh 225699 - 227060 + | 4.5S-RNP protein rpsP 227157 - 227399 + | 30S ribosomal protein S16 rimM 227396 - 227965 + | 16S rRNA processing protein trmD 227992 - 228759 + | tRNA(guanine-N1)methyltransferase TERM 217 228881 - 228902 + G 72 -8.7 -3.10929 | opp_overlap 228881, overlap 228879 228878 GAAGGTAGTAAAAAA CGCCTACAA ATTT TTGAAGGCG TAGTTATTTCTATTA TERM 218 228902 - 228881 - g 95 -8.7 -5.18357 | opp_overlap 228881 228879 228878 GAAGGTAGTAAAAAA CGCCTACAA ATTT TTGAAGGCG TAGTTATTTCTATTA rplS 228767 - 229117 + | 50S ribosomal protein L19 TERM 219 229167 - 229148 - f 74 -8 -3.7212 | AAATATTTAACATAA GCTTAATA CATA TATTAAGC GTTAGAATTTTATAA TERM 220 229416 - 229383 - f 85 -10.5 -3.21099 | opp_overlap 229386 229392, overlap 229386 GTGTTGTATGAGTAA CAATATAACCACACA GATA CGTGTGTTTATATTG TTAAAAGAATCTCAT aroF 229622 - 230707 + | phospho-2-dehydro-3-deoxyheptonate aldolase tyrA 230704 - 231831 + | bifunctional chorismate mutase/prephenate dehydrogenase pheA 232969 - 232079 - | chorismate mutase P yfiO 233934 - 233191 - | putative lipoprotein TERM 221 233445 - 233424 - G 71 -2.3 -5.41143 | TATTTTTTAAAAAAA TTAAACGTT TGTA AGCGTCTAA AGAATATTGACTATC TERM 222 234286 - 234272 - g 78 -5.8 -4.90778 | TTCATTGAAATAAAA GATATT GTT AATATC GATAATAATAATATA TERM 223 234870 - 234882 + G 74 -7.7 -3.85184 | AAGGTATATCTGATA CAGTC AAT GACTG TTTACATGTTTTAAA rluD 234005 - 235036 + | pseudouridine synthase TERM 224 235725 - 235709 - g 100 -8.7 -5.53991 | overlap 235694 GATTTATTAAAAAAA TCCGGAG TAT CTCCAGA AAATATAAAAAAATC TERM 225 236727 - 236717 - g 74 -4 -5.23016 | opp_overlap 236717 AAAGAATGGAAAAAA GAAA AAG TTTC TTTATCTAACGCTCA TERM 226 237271 - 237304 + G 90 -11.3 -3.41569 | gap 1, overlap 237266 237263 237269 AAAATTGTTAGGAGC TCCTCCTGGTT-ATAT TGG ATATGAATCAGGAGGA TATTTGACTGAATCA clpB 235325 - 237901 + | ATP-dependent protease murB 238230 - 239267 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 227 239432 - 239422 - f 71 -5.4 -4.70659 | TTGGAGATTTAAAAA CCTT GTT AAGG GATAATGAAAATTAT birA 239424 - 240239 + | biotin-[acetylCoA carboxylase] holoenzyme synthetase coaA 241329 - 240388 - | pantothenate kinase TERM 228 242021 - 242051 + H 100 -17.2 -2.83164 | AGCGTACGTCGTATA CCTATCTTCTTATT AAA AATAAGAAGATAGG TATAATCATGGATAG bfr 242155 - 242625 + | bacterioferritin rpsJ 242945 - 243256 + | 30S ribosomal subunit protein S10 TERM 229 243282 - 243321 + F 83 -6.8 -5.0916 | opp_overlap 243289, overlap 243283 243285 GATGCATCGTAATAG GCATTAATTTGTATTTTA TGTG TAAAATACAAATTAATAA TTTTTGTATTAAAGG TERM 230 243283 - 243320 + F 85 -10.3 -3.64773 | opp_overlap 243289, overlap 243282 243285 ATGCATCGTAATAGG CATTAATTTGTATTTTA TGTG TAAAATACAAATTAATA ATTTTTGTATTAAAG TERM 231 243285 - 243318 + F 100 -12.9 -3.39242 | opp_overlap 243289, overlap 243283 243282 GCATCGTAATAGGCA TTAATTTGTATTTTA TGTG TAAAATACAAATTAA TAATTTTTGTATTAA TERM 232 243314 - 243289 - f 76 -9.3 -3.2218 | opp_overlap 243285 243283 243282 CGTAATAGGCATTAA TTTGTATTTTA TGTG TAAAATACAAA TTAATAATTTTTGTA rplC 243362 - 244015 + | 50S ribosomal subunit protein L3 rplD 244016 - 244648 + | 50S ribosomal protein L4 rplW 244645 - 244947 + | 50S ribosomal subunit protein L23 TERM 233 244934 - 244922 - f 76 -4.9 -5.1361 | ATAAAGGCCAAAAAA TTGAT TTT ATCAA TACAGTAGAATAGAT rplB 244971 - 245798 + | 50S ribosomal protein L2 rpsS 245825 - 246106 + | 30S ribosomal protein S19 rplV 246156 - 246485 + | 50S ribosomal subunit protein L22 rpsC 246519 - 247229 + | 30S ribosomal protein S3 rplP 247241 - 247645 + | 50S ribosomal protein L16 TERM 234 247699 - 247683 - g 95 -3.7 -6.50278 | opp_overlap 247686, overlap 247686 AAATCAAAAAAAAAA TGACACT ATT AGTGTTA CATTGCTTCAGTCAG rpmC 247645 - 247857 + | 50S ribosomal subunit protein L29 rpsQ 247872 - 248126 + | 30S ribosomal subunit protein S17 rplN 248249 - 248620 + | 50S ribosomal protein L14 rplX 248636 - 248956 + | 50S ribosomal protein L24 TERM 235 249126 - 249112 - g 91 -7.2 -5.1356 | overlap 249106 TGTTACCAATAAAAA GCTTTT AGA AAAAGC AACAGAAGATTTAAT rplE 248969 - 249508 + | 50S ribosomal protein L5 TERM 236 249643 - 249672 + G 70 -8 -3.11222 | gap 1, opp_overlap 249643, overlap 249642 ATTATTATTGATCAA CGCATTCCTAATG AGGAG CGTT-GGAATGCG GTTTTAAAATTACAG rpsN 249541 - 249846 + | 30S ribosomal subunit protein S14 rpsH 249878 - 250273 + | 30S ribosomal protein S8 rplF 250263 - 250829 + | 50S ribosomal protein L6 rplR 250861 - 251214 + | 50S ribosomal protein L18 rpsE 251230 - 251754 + | 30S ribosomal subunit protein S5 rplO 251937 - 252371 + | 50S ribosomal subunit protein L15 secY 252382 - 253719 + | preprotein translocase, membrane component TERM 237 253725 - 253707 - f 70 -7.6 -3.44321 | overlap 253705 AGCAAACCTGAAACA TTTTAATC ATT GATTAAAA AAAATCATATACATA TERM 238 253743 - 253730 - f 78 -3.9 -5.86965 | opp_overlap 253730 ATTGATTAAAAAAAA TCATA TACA TATGA TTATAGGAAACATTA rmpJ 253758 - 253874 + | 50S ribosomal subunit protein L36 rpsM 253923 - 254288 + | 30S ribosomal protein S13 TERM 239 254432 - 254414 - g 73 -9 -2.85545 | overlap 254409 CTTTTAATAACACTA TTATCACT ATT AGTGATAA GCAAGGTAATACTTT rpsK 254320 - 254712 + | 30S ribosomal protein S11 rpsD 254750 - 255373 + | 30S ribosomal protein S4 rpoA 255408 - 256400 + | DNA-directed RNA polymerase subunit alpha rplQ 256441 - 256818 + | 50S ribosomal protein L17 fmt 257847 - 256879 - | methionyl-tRNA formyltransferase def 258379 - 257858 - | polypeptide deformylase TERM 240 257966 - 257956 - G 74 -4 -5.16071 | AATGATCAATAAAAA GTTT TCC AAAC AAATGATCTACTTCG TERM 241 257997 - 258013 + g 71 -8.1 -3.29613 | opp_overlap 257996 TGTTGAATGCAAATT GCTAATA AAT TATTAGC TTCCATTTCAAATTT yrdC 258767 - 259351 + | RNA-binding protein TERM 242 259514 - 259524 + G 75 -2.6 -5.53288 | GATAATTTCAATTAT TTAT TAC ATAA TTTTTTTAAGTTAGG TERM 243 259635 - 259601 - g 100 -18.9 -3.33696 | opp_overlap 259605 259610, overlap 259605 TTTTTGTGTAATCAA TTAACTGAACGAGCT GAAAA AGCTCGTTCAGTTAA TACGATAAAAAAATT TERM 244 259605 - 259631 + G 100 -15.3 -3.16564 | opp_overlap 259605 259601, overlap 259610 TGTGTAATCAATTAA CTGAACGAGCT GAAAA AGCTCGTTCAG TTAATACGATAAAAA TERM 245 259631 - 259605 - g 100 -15.3 -3.45366 | opp_overlap 259605 259610, overlap 259601 TGTGTAATCAATTAA CTGAACGAGCT GAAAA AGCTCGTTCAG TTAATACGATAAAAA TERM 246 259610 - 259626 + G 71 -8 -3.20901 | opp_overlap 259605 259601, overlap 259605 AATCAATTAACTGAA CGAGCT GAAAA AGCTCG TTCAGTTAATACGAT aroE 259379 - 260254 + | shikimate 5-dehydrogenase TERM 247 260398 - 260384 - T 84 -5.8 -5.42259 | opp_overlap 260369 260383 260391 TGATTTTTAAAAAAA TCATAT ATA ATATGA AATATTGCTTTGATT gloB 261685 - 260930 - | hydroxyacylglutathione hydrolase rnhA 262441 - 261986 - | ribonuclease H dnaQ 262500 - 263249 + | DNA polymerase III, epsilon subunit gmhA 263467 - 264054 + | phosphoheptose isomerase TERM 248 264050 - 264034 - T 95 -9.5 -4.96848 | CTGCTTATAGAAAAA GAAATGG TGT CCATTTC GTGAGAAATGATGAA TERM 249 264106 - 264134 + T 73 -4 -5.36441 | CATAAGGACATTATA CAAATAGAAACA AAAAA TGTATTTATTTG TTTTTTCTGTACAAA ahpC 265062 - 264460 - | alkyl hydroperoxide reductase C22 protein TERM 250 265211 - 265197 - H 82 -4.4 -5.74122 | opp_overlap 265197 TACTATATAAAAAAA TTTTTA AAA TAAAAA ATTCCTTATCTGTTT tgt 266542 - 267648 + | tRNA-guanine transglycosylase yajC 267721 - 268068 + | preprotein translocase, auxillary membrane component secD 268103 - 269962 + | preprotein translocase subunit SecD secF 270024 - 270941 + | preprotein translocase subunit SecF TERM 251 271157 - 271102 - f 86 -9.5 -4.3295 | gap 1, opp_overlap 271115, overlap 271115 TTGAACAAAATTAAA TTTATAACAACAATACGTATGCGTTA TACAT TAACGCATACGTATT-TAATTATCAA TAAACATTACTACAA TERM 252 271145 - 271115 - f 100 -15.7 -4.04491 | opp_overlap 271115, overlap 271102 AATTTATAACAACAA TACGTATGCGTTA TACAT TAACGCATACGTA TTTAATTATCAATAA TERM 253 271115 - 271145 + F 100 -15.7 -4.00868 | opp_overlap 271115 271102 AATTTATAACAACAA TACGTATGCGTTA TACAT TAACGCATACGTA TTTAATTATCAATAA ribD 271407 - 272546 + | pyrimidine deaminase/reductase ribH 272651 - 273127 + | 6,7-dimethyl-8-ribityllumazine synthase nusB 273155 - 273589 + | transcription antitermination protein NusB TERM 254 273567 - 273601 + F 100 -17.6 -2.78816 | opp_overlap 273571 273574, overlap 273571 273574 AGCTTTGTGTTAGTA CAAACAATCATATTAT TAA ATAATATGATTGTTTG TATAATGAAAAATAA TERM 255 273597 - 273571 - f 100 -12.6 -3.96148 | opp_overlap 273567 273571 273574, overlap 273574 TTGTGTTAGTACAAA CAATCATATTAT TAA ATAATATGATTG TTTGTATAATGAAAA TERM 256 273571 - 273597 + F 100 -12.6 -4.08706 | opp_overlap 273571 273574, overlap 273567 273574 TTGTGTTAGTACAAA CAATCATATTAT TAA ATAATATGATTG TTTGTATAATGAAAA TERM 257 273594 - 273574 - f 80 -8.5 -4.11183 | opp_overlap 273571 273567 273574, overlap 273571 TGTTAGTACAAACAA TCATATTAT TAA ATAATATGA TTGTTTGTATAATGA TERM 258 273574 - 273594 + F 81 -8.5 -4.16814 | opp_overlap 273574 273571, overlap 273571 273567 TGTTAGTACAAACAA TCATATTAT TAA ATAATATGA TTGTTTGTATAATGA pgpA 273677 - 274168 + | phosphatidylglycerophosphatase A dxs 276139 - 274265 - | 1-deoxy-D-xylulose-5-phosphate synthase ispA 277095 - 276175 - | geranyltranstransferase thiI 277383 - 278843 + | thiamine biosynthesis protein ThiI yajR 280333 - 279173 - | MFS family transporter cyoE 281378 - 280494 - | protohaeme IX farnesyltransferase cyoD 281700 - 281398 - | cytochrome o ubiquinol oxidase, subunit IV cyoC 282291 - 281704 - | cytochrome o ubiquinol oxidase, subunit III TERM 259 282178 - 282153 - G 71 -8.5 -2.97158 | gap 1, opp_overlap 282153, overlap 282152 TACCTGAAGAACAAT CTGCTGTGTTAT TAC ATAACACAG-AG TATATTGCAAATAAA TERM 260 282153 - 282178 + g 72 -8.5 -3.07895 | gap 1, opp_overlap 282153 282152 TACCTGAAGAACAAT CTGCTGTGTTAT TAC ATAACACAG-AG TATATTGCAAATAAA cyoB 284230 - 282269 - | cytochrome o ubiquinol oxidase, subunit I TERM 261 283240 - 283230 - G 87 -5.4 -5.58454 | overlap 283232 CCCATAGTAAAAAAA TGGT GTA ACCA TACACAAAAAGATAA cyoA 285190 - 284306 - | cytochrome o ubiquinol oxidase, subunit II TERM 262 285957 - 285912 - H 79 -7.3 -4.4767 | opp_overlap 285921 285923, overlap 285900 285915 285923 TTATTCATCATAAAA TCATGATAAAATTAATGTAAT AAAA ATTATATTAATCTTATCATCA AAAAAAACAATTTAA TERM 263 285954 - 285915 - H 76 -9 -3.20028 | opp_overlap 285921 285923, overlap 285900 285912 285923 TTCATCATAAAATCA TGATAAAATTAATGTAAT AAAA ATTATATTAATCTTATCA TCAAAAAAAACAATT TERM 264 286618 - 286606 - H 76 -3.5 -5.88197 | opp_overlap 286606 TTAAATATAAAAAAA TATAT CAT ATATA ATGTATTGAATTTAT clpP 287418 - 288044 + | ATP-dependent Clp protease proteolytic subunit TERM 265 289224 - 289200 - g 100 -11.7 -4.64334 | opp_overlap 289203, overlap 289187 AATGCTTTAATAAAA CAATATGAAAT GTT ATTTCATATTG ATGGAGTAAAATTGG clpX 288183 - 289442 + | ATP-dependent protease ATP-binding subunit TERM 266 289542 - 289523 - T 86 -6.6 -5.21236 | AATTGAGAATAAAAA TTTGTTAT TGTC ATAACAAA TCATCGCTCTACTTT yggX 289877 - 289623 - | hypothetical protein TERM 267 289872 - 289856 - G 71 -2.3 -5.40474 | ATTTTTTTAAAAAAA CACAATA AAT TATTTTG GACATTATTAGAAGT mutY 290998 - 289949 - | adenine DNA glycosylase TERM 268 290058 - 290098 + g 100 -12.3 -4.45771 | opp_overlap 290062 AATTTTTTATGTGTA TTAAGCAATATTGGTTT TATTTCT AAATCAATATTGCTTAA TTTGTGTTTTAGAAT TERM 269 291313 - 291352 + r 100 -11 -5.11112 | gap 1, opp_overlap 291312 291315, overlap 291316 ACAGTGTCCATATAT TAGTGCACATGCATTTGTT CAT AACAGACGCATGTGCA-TA TTTTTATTAAAATTT TERM 270 291351 - 291315 - R 85 -11.7 -2.6927 | opp_overlap 291313 291316, overlap 291312 AGTGTCCATATATTA GTGCACATGCATTTGTT CAT AACAGACGCATGTGCAT ATTTTTATTAAAATT TERM 271 291316 - 291350 + r 100 -15.2 -4.16909 | opp_overlap 291315 291312, overlap 291313 GTGTCCATATATTAG TGCACATGCATTTGTT CAT AACAGACGCATGTGCA TATTTTTATTAAAAT TERM 272 291779 - 291791 + r 79 -2.7 -6.15259 | ATTAATTTAAATATT TGATG TAT TATCA TTTTTTTTTACATTA yqgF 292375 - 291941 - | putative endonuclease involved in recombination TERM 273 292093 - 292108 + g 74 -7.6 -3.76952 | CATGCATTTTTACTG GAACTG GAAA CAGTTC TTTGAGTTGAATGGC yqgE 292952 - 292368 - | hypothetical protein TERM 274 293503 - 293558 + r 100 -14 -3.95448 | gap 1, opp_overlap 293502 293526, overlap 293493 293506 293508 293526 TATACTTGCATACAT TGCAATTTTGTTTATACATAAAATTAA GTA TTAATTTTATGTATAAACAACAT-GTA TTTAAATTTTAATCT TERM 275 293506 - 293556 + r 100 -14.6 -3.55481 | opp_overlap 293502 293526, overlap 293493 293503 293508 293526 ACTTGCATACATTGC AATTTTGTTTATACATAAAATTAA GTA TTAATTTTATGTATAAACAACATG TATTTAAATTTTAAT TERM 276 293508 - 293554 + r 100 -17.2 -3.33899 | opp_overlap 293502 293526, overlap 293506 293503 293526 TTGCATACATTGCAA TTTTGTTTATACATAAAATTAA GTA TTAATTTTATGTATAAACAACA TGTATTTAAATTTTA metK 294909 - 293740 - | S-adenosylmethionine synthetase TERM 277 294445 - 294456 + g 77 -4.4 -5.13722 | CAACACTCCACTTTT TCTC ACTT GAGA TTTTCTTTTAATCAA TERM 278 296234 - 296212 - g 80 -7.8 -4.22678 | opp_overlap 296224, overlap 296206 TACATTCAATACAAA TTGGTATTCG TAC CGAATACAAA AAATGTTTCGGATTT speB 295662 - 296582 + | agmatinase TERM 279 297735 - 297749 + G 80 -7.2 -4.58395 | TTGATAGTAGGAGGA GGTATT GCA AATACC TTTTTAGCAGCTCAA pgk 297078 - 298262 + | phosphoglycerate kinase fbaA 298347 - 299429 + | fructose-bisphosphate aldolase TERM 280 300101 - 300081 - g 79 -2.5 -5.86976 | opp_overlap 300081 300097, overlap 300084 TGACAAAAGAAAAAA TTATTGCTG CTG CAGCTAAAA AATTTATTTGTATCG rpiA 299768 - 300424 + | ribose-5-phosphate isomerase A TERM 281 300549 - 300524 - T 71 -8.5 -2.74701 | overlap 300521 ATATTTTTAATATGA TCATTATCAAG ATTT CTTGATAATAA ATGCAAATTAATTAA TERM 282 300623 - 300611 - T 81 -6.3 -5.08824 | TCCGTATTCAAAAAA TGTGA TTA TCACA AAACTAAATATTACA ygfA 301275 - 300664 - | putative ligase TERM 283 301217 - 301242 + g 82 -7.7 -4.65494 | overlap 301218 GTTAAAGTTCTACGT ATTCTTCGTAT ATAC ATACGAAGAAA TTTTCTGTGTGATTT TERM 284 301218 - 301241 + g 87 -11.2 -3.3767 | overlap 301217 TTAAAGTTCTACGTA TTCTTCGTAT ATAC ATACGAAGAA ATTTTCTGTGTGATT ygfE 301761 - 301417 - | Z-ring-associated protein TERM 285 302433 - 302443 + H 71 -3.2 -5.68489 | CTTACAAAAGATGTT TGCA TAT TGCG TTTTTTATTGTTATA ubiH 302617 - 303807 + | 2-octaprenyl-6-methoxyphenol hydroxylase visC 303831 - 305054 + | monooxygenase ygfZ 306099 - 305107 - | putative aminomethyltransferase TERM 286 305243 - 305263 + g 74 -6.2 -4.53857 | GATTGTAAAACAATT CCAACATT TTTCC AGTGTTGG TTATTTATTTTTAAT TERM 287 307692 - 307682 - g 74 -5.4 -4.7871 | AATTAGCATTAAAAA CACT TTA AGTG AGATTCATAATGACT prfB 306663 - 307709 + | peptide chain release factor 2 lysS 307702 - 309231 + | lysyl-tRNA synthetase TERM 288 309712 - 309691 - g 85 -8.1 -4.66535 | opp_overlap 309691 AAGCGGGAAAACAAA GCAATGAAA TAGT TTTCACTGC TGATATTTTAGAAGA lysA 309411 - 310700 + | diaminopimelate decarboxylase ygdP 311330 - 311806 + | dinucleoside polyphosphate hydrolase TERM 289 312575 - 312594 + G 76 -6.5 -4.57073 | TGCTGCCTCGTCATC CATCTCA ATTATA TGAGATG TTTTTGGAGGGAGTA lgt 311989 - 312834 + | prolipoprotein diacylglyceryl transferase TERM 290 313808 - 313830 + G 84 -10 -3.40403 | CAATCAAAAATATGG CGTATGTTCT TAG AGAATATACG TTGTAATCAGAAAGA TERM 291 313931 - 313897 - g 100 -13.2 -5.02074 | opp_overlap 313908 TGATTTCCTAAAAAA TACTCAGAAGATAATT TTT AATTATCTTCCAAGTA GAATATTTATTTTTG TERM 292 315022 - 315042 + G 71 -7.5 -3.43676 | opp_overlap 315022 315024, overlap 315025 315026 AACATTAAAAAAATG GAGAGACCG ATT CGGTCATTC TTATACATTGGTAGA TERM 293 315026 - 315038 + G 73 -9.1 -2.90403 | opp_overlap 315024 315022, overlap 315025 315022 TTAAAAAAATGGAGA GACCG ATT CGGTC ATTCTTATACATTGG recC 313298 - 316699 + | exonuclease V, gamma chain recD 318731 - 316824 - | exonuclease V, alpha chain TERM 294 317852 - 317840 - G 74 -6.3 -4.40993 | GAGAAAGCATCAAAA TTAGC TGA GCTAA CATAGATAGACTAAC TERM 295 319000 - 319036 + r 88 -9.8 -4.58395 | opp_overlap 319003, overlap 319003 319034 TCTTATTATGAGATA AAATCTAAACATTATT CATTT AATAATGTTTAGATTA TTTTTAGAGAATAAA TERM 296 319033 - 319003 - R 100 -11.5 -4.58424 | opp_overlap 319000 319003 TATTATGAGATAAAA TCTAAACATTATT CATTT AATAATGTTTAGA TTATTTTTAGAGAAT TERM 297 319003 - 319033 + r 100 -11.5 -4.40963 | opp_overlap 319003, overlap 319000 TATTATGAGATAAAA TCTAAACATTATT CATTT AATAATGTTTAGA TTATTTTTAGAGAAT recB 322578 - 319015 - | exonuclease V TERM 298 319738 - 319699 - G 100 -15.2 -5.20216 | opp_overlap 319706 319708 319710, overlap 319700 319703 GATACTATGAAAAAA GCTACCACATACTTTTCC TTTA GGAAAAGTATGTGGTGTC AATGGAATCTCATTT TERM 299 319736 - 319700 - G 100 -16.2 -3.71045 | gap 1, opp_overlap 319706 319708 319710, overlap 319699 319703 ATACTATGAAAAAAG CTACCACATACTTTTCC TTTA GGAAAAGTATGTGGT-G TCAATGGAATCTCAT TERM 300 319734 - 319703 - G 100 -19 -2.94298 | opp_overlap 319706 319708 319710, overlap 319700 319699 CTATGAAAAAAGCTA CCACATACTTTTCC TTTA GGAAAAGTATGTGG TGTCAATGGAATCTC TERM 301 319706 - 319731 + g 100 -13.5 -2.64735 | opp_overlap 319703 319700 319699, overlap 319708 319710 TGAAAAAAGCTACCA CATACTTTTCC TTTA GGAAAAGTATG TGGTGTCAATGGAAT TERM 302 319708 - 319729 + g 81 -10.3 -2.8655 | opp_overlap 319703 319700 319699, overlap 319706 319710 AAAAAAGCTACCACA TACTTTTCC TTTA GGAAAAGTA TGTGGTGTCAATGGA TERM 303 319710 - 319727 + g 71 -8.5 -2.98223 | opp_overlap 319703 319700 319699, overlap 319708 319706 AAAAGCTACCACATA CTTTTCC TTTA GGAAAAG TATGTGGTGTCAATG TERM 304 321009 - 321026 + g 82 -9.9 -3.35869 | opp_overlap 321009 321008 321006 AATTGTATAAAATAG TGGCACA CTCT TGTGCCA TTGATCGTTTATAGT TERM 305 321026 - 321009 - G 79 -9.9 -2.88446 | opp_overlap 321009, overlap 321008 321006 AATTGTATAAAATAG TGGCACA CTCT TGTGCCA TTGATCGTTTATAGT TERM 306 321451 - 321435 - G 70 -7.3 -3.76176 | GAAACTCATCAATAA GCGTTAC CGG ATAACGC GTACGCAGTATATGT TERM 307 322140 - 322166 + g 83 -9.6 -3.81602 | opp_overlap 322139 322137 322140 CATTATCAACAATAT TCGTATTAAACA GCA TGTTTAATTCGA TTGTATTGTGATTTA TERM 308 322166 - 322140 - G 74 -9.6 -2.66963 | opp_overlap 322140, overlap 322139 322137 CATTATCAACAATAT TCGTATTAAACA GCA TGTTTAATTCGA TTGTATTGTGATTTA TERM 309 322711 - 322700 - R 71 -3 -5.5454 | TCAAACAAATAAAAA TGAA TTAC TTCA CACCAATAAATATAA TERM 310 322790 - 322756 - R 72 -7.4 -3.58859 | overlap 322754 322765 AATATTTAAACAATA TACTTAAAATACCATA GAA TACAGTACTTCAAGTA AGAAAAATATATTTT dapD 323655 - 322804 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 311 323429 - 323442 + g 72 -2.4 -5.43866 | opp_overlap 323429 TCCATAGTATGAAAT GCAA GCATAA TTGC TTTTTTTAGCCATTG TERM 312 323466 - 323480 + g 72 -2.8 -5.34555 | GCCATTGATGCGTAA TCCATG TAC CATTGA TTTTTTCTGATATAC TERM 313 323771 - 323806 + r 79 -9.4 -3.20775 | gap 1, overlap 323771 AGTTATATAGTGATA TTTGTTTAAGGATATTA TGT TGATATCCTT-AACAAA ATTTATTCATATTTA TERM 314 323771 - 323807 + r 74 -6.1 -4.36433 | overlap 323771 AGTTATATAGTGATA TTTGTTTAAGGATATTA TGT TGATATCCTTAACAAAA TTTATTCATATTTAA map 324859 - 324077 - | methionine aminopeptidase rpsB 325186 - 325872 + | 30S ribosomal protein S2 tsf 325958 - 326776 + | elongation factor Ts pyrH 326982 - 327707 + | uridylate kinase TERM 315 327867 - 327847 - g 74 -4.1 -5.25893 | ATACATATGAAAAAA TGTATTAAA AAC TTTAAAACA AATATCAATAATATT frr 327793 - 328359 + | ribosome recycling factor dxr 328454 - 329647 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 316 330290 - 330278 - g 80 -7.7 -4.29049 | overlap 330275 CAAGGAGTAAAACAA CTTGC CAC GCAAG TGCAGCAAGGAATAT uppS 329804 - 330556 + | undecaprenyl pyrophosphate synthetase cdsA 330588 - 331448 + | phosphatidate cytidylyltransferase TERM 317 331824 - 331844 + G 83 -6.9 -4.91109 | TTAACTTTCTTTTTT CTATTGTGT TAT ACACATTAG TTTTTATGATAGGCG TERM 318 332472 - 332449 - g 90 -12.6 -3.02434 | opp_overlap 332449 332454, overlap 332446 332444 TCCAATAAAACATCA TGCAATCCAT CAAT ATGGATTGCA TCTATCTATACTGGA TERM 319 332449 - 332472 + G 90 -12.6 -3.0682 | opp_overlap 332449 332446 332444, overlap 332454 TCCAATAAAACATCA TGCAATCCAT CAAT ATGGATTGCA TCTATCTATACTGGA ecfE 331484 - 332857 + | hypothetical protein TERM 320 333483 - 333472 - g 81 -3 -5.71712 | opp_overlap 333472 TTCCATACAAAAAAA TTGT TATC ACAA TTTAAATTATATAGA TERM 321 334608 - 334619 + G 77 -3 -5.59655 | TAATGCTATTAATTT TCAT ACAA ATGA TTTTTTATTAGTTTC TERM 322 334861 - 334837 - g 80 -9.5 -3.39288 | opp_overlap 334836, overlap 334835 TATTCTGGAAGAATA CATAAAAAAGA AAA TCCTTTTTATG ATAACTTCTACGCCG TERM 323 335284 - 335272 - g 85 -4.9 -5.68039 | AAATTGATAAAAAAA TATCT TGG AGATA TAGAAGAACCATTTC yaeT 332902 - 335325 + | outer membrane protein precursor TERM 324 335784 - 335766 - g 93 -9 -4.77778 | opp_overlap 335766 AAGAAAGAGATAAAA TTCTGAAT ATG ATTCAGAA TGTGGTAACGAATGT TERM 325 335766 - 335784 + G 72 -9 -2.78935 | opp_overlap 335766 AAGAAAGAGATAAAA TTCTGAAT ATG ATTCAGAA TGTGGTAACGAATGT hlpA 335405 - 335905 + | histone-like protein TERM 326 336241 - 336205 - g 100 -9.5 -5.243 | opp_overlap 336207, overlap 336207 TAAACCATCAAAAAA CATTGCATCTGGAGCTA TAA TTGCTTCAGATGCAATT TTAGGTCAAAGAGTA TERM 327 336239 - 336207 - g 100 -12.1 -4.23218 | opp_overlap 336207, overlap 336205 AACCATCAAAAAACA TTGCATCTGGAGCTA TAA TTGCTTCAGATGCAA TTTTAGGTCAAAGAG TERM 328 336207 - 336239 + G 100 -14.3 -4.18018 | opp_overlap 336205 336207 AACCATCAAAAAACA TTGCATCTGGAGCTA TAA TTGCTTCAGATGCAA TTTTAGGTCAAAGAG lpxD 335909 - 336940 + | UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase TERM 329 337203 - 337229 + G 73 -8.1 -3.41359 | overlap 337201 337204 TTTTTCAAGGTCATT TTCCGGGAAAA CCCAT TTTTCCTGGAG TATTAATTTTAGAGG TERM 330 337204 - 337228 + G 74 -9.4 -2.64333 | overlap 337203 337201 TTTTCAAGGTCATTT TCCGGGAAAA CCCAT TTTTCCTGGA GTATTAATTTTAGAG fabZ 337040 - 337495 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 331 338213 - 338201 - g 71 -7.7 -3.43853 | overlap 338199 TGAATCAGCTAAAGA GGCTT TAA AAGCC TTAGCAGCAGAACAT lpxA 337500 - 338288 + | UDP-N-acetylglucosamine acyltransferase TERM 332 338419 - 338405 - g 77 -2.9 -5.58454 | opp_overlap 338405 CGTACATTAAAAAAA TACTT AAAAA AAGTA CGTTTTTTTGGTATT lpxB 338291 - 339454 + | lipid-A-disaccharide synthase TERM 333 339776 - 339751 - g 74 -8.5 -3.3676 | gap 1 TCTAATATTTTAGAA GCTCGTTT-ATT AGC AATGAAACGAGC AGTGCATAATTTATC rnhB 339451 - 340104 + | ribonuclease HII TERM 334 342586 - 342570 - g 73 -4.5 -5.09426 | GTGAATGTCAAAAAA TGAAACT TAT AATTTCA CCCCCAAATATTAAC TERM 335 342785 - 342775 - g 70 -4 -4.98911 | CAGTACAAAAATAAA TCAT CGT ATGA TTGAAAAATTAATTC dnaE 340151 - 343642 + | DNA polymerase III, alpha chain TERM 336 344168 - 344148 - g 70 -8.3 -2.99471 | TTACTTTTATAGATA CTCCAGG CGCTTAT CCTGGAG TGGGCGCAGAAAAAC accA 343661 - 344620 + | acetylCoA carboxylase, carboxytransferase subunit alpha TERM 337 345484 - 345460 - g 74 -8.6 -3.33696 | overlap 345461 345463 CCTTGTTTTAATCAA GTAGTTGCGC GTACT GCGCAACTAT GCAGAGATCAAGAAA TERM 338 345483 - 345461 - g 87 -12.1 -2.60075 | overlap 345460 345463 CTTGTTTTAATCAAG TAGTTGCGC GTACT GCGCAACTA TGCAGAGATCAAGAA TERM 339 345481 - 345463 - g 81 -10.3 -2.84098 | overlap 345461 345460 TGTTTTAATCAAGTA GTTGCGC GTACT GCGCAAC TATGCAGAGATCAAG TERM 340 346241 - 346258 + G 70 -7.1 -3.72788 | opp_overlap 346241 346255, overlap 346255 ATACGTTATGGAAAA TATCTTG GTTA CAAGATA TTATATCTTATAAAA TERM 341 346258 - 346241 - g 76 -7.1 -4.19258 | opp_overlap 346241 346255, overlap 346255 ATACGTTATGGAAAA TATCTTG GTTA CAAGATA TTATATCTTATAAAA tilS 344776 - 346308 + | tRNA(Ile)-lysidine synthetase TERM 342 346296 - 346308 + T 70 -4.9 -4.87037 | overlap 346301 AAATAGCGTTCGTTA TCATT TAG AATGA TTTTTCATATCTATT proS 348255 - 346510 - | prolyl-tRNA synthetase TERM 343 347503 - 347522 + g 87 -8.6 -4.26076 | TAATTGCATTGTTTC TACAGCCG TTTT CGGTTGTA TTTTGATAGGAATCA TERM 344 347954 - 347979 + g 73 -7.7 -3.70446 | AATACAAATTCCTGA TTATTGCGATT TTTA AAACGCAATAA TTCTGTTCCATATCC gmhB 348625 - 349209 + | D,D-heptose 1,7-bisphosphate phosphatase accC 350699 - 349344 - | acetyl CoA carboxylase, biotin carboxylase subunit accB 351162 - 350710 - | acetylCoA carboxylase, BCCP subunit aroQ 351642 - 351184 - | 3-dehydroquinate dehydratase TERM 345 351739 - 351777 + H 91 -11.4 -3.72893 | opp_overlap 351743 351750, overlap 351753 TAACGAGTGTTCCTA TATATTAGGAATGAGAAA TTT TTTCTTATTCATAATATA TTTCATAGAAAAATC TERM 346 352108 - 352136 + H 84 -5.5 -5.42131 | overlap 352109 TTCGTCATGCAATAC GGTTTATATTATG TAT TATAATATAAACA TTTTTTATGTAGTTA TERM 347 352109 - 352135 + H 82 -9 -3.83652 | overlap 352108 TCGTCATGCAATACG GTTTATATTATG TAT TATAATATAAAC ATTTTTTATGTAGTT TERM 348 352704 - 352742 + G 74 -2.2 -5.52384 | AAGTTGAACGTAGAG CTATACGTGAATCTGCGC AAG GAGCAGGCGCACGTGAGG TTTTTTTGATAGAAG mreB 352331 - 353374 + | rod shape-determining protein mreC 353495 - 354310 + | rod shape-determining protein mreD 354421 - 354900 + | rod shape-determining protein tldD 355310 - 356773 + | hypothetical protein TERM 349 357060 - 357100 + F 71 -2.1 -5.8096 | opp_overlap 357060 357063 357064, overlap 357062 357063 357075 357091 ATGCTACATTTATAA TAATTTTTTAATTAGTGAA TTT TTCATTAATTAAAAACAAA TTTTTATTTTTTATA TERM 350 357096 - 357064 - f 76 -9.5 -2.89659 | opp_overlap 357063 357062 357060 357075 357091, overlap 357060 357063 TACATTTATAATAAT TTTTTAATTAGTGAA TTT TTCATTAATTAAAAA CAAATTTTTATTTTT TERM 351 357091 - 357106 + F 71 -3.4 -5.39721 | opp_overlap 357064 357063, overlap 357063 357062 357060 GAATTTTTCATTAAT TAAAAA CAAA TTTTTA TTTTTTATATCATGC TERM 352 357128 - 357158 + F 100 -17.2 -2.87522 | opp_overlap 357136, overlap 357136 ATATCATGCTGTATA GTTATTAACATCAG TTA CTGATGTTAATAAC TCTGATATGGATTAG TERM 353 357136 - 357150 + F 74 -8.6 -3.20858 | opp_overlap 357136, overlap 357128 CTGTATAGTTATTAA CATCAG TTA CTGATG TTAATAACTCTGATA TERM 354 357150 - 357136 - f 74 -8.6 -3.20382 | opp_overlap 357136 357128 CTGTATAGTTATTAA CATCAG TTA CTGATG TTAATAACTCTGATA TERM 355 357939 - 357929 - g 71 -5.4 -4.64346 | opp_overlap 357929 AAAAATTAAAAACAA TGGA ATC TCCA GTATTATTCTCTGCA pmbA 357217 - 358557 + | hypothetical protein TERM 356 359666 - 359703 + F 79 -10.3 -2.82987 | opp_overlap 359675 359677 AAAATACTAAGCGTG TTTTAATTACATAAAAA TAAT TTTTTACGTAATTAAAA TCTAATAAATATTAG TERM 357 359739 - 359752 + F 75 -2.5 -5.95286 | AAAATAAATTCGGTA TAAAT AATT ATTTA TTTTTTGTTTTTCAT TERM 358 360692 - 360679 - g 74 -6.7 -4.24963 | TAGAAGCAGCTAAAA TGCCT AAAG AGGCA CGAAACAAAGTAGAA lon 359892 - 362255 + | DNA-binding ATP-dependent protease La TERM 359 363715 - 363693 - f 70 -4.3 -5.252 | TATTCTTACAAAAAA TGTTCATTT ATTTA AAATAAACA CTTGAAATTTTCACT apt 363915 - 364469 + | adenine phosphoribosyltransferase TERM 360 365876 - 365860 - g 100 -9.5 -5.12707 | TTAAATTTTAAAAAA TCCGAAT TAA ATTCGGA TAATACCAAACCTAA TERM 361 365904 - 365929 + G 71 -7.7 -3.45386 | overlap 365906 TAAAATTTCAAAATC TGTCTCTAGTA GAGA TACTAGGGATA TTACTTCTACAATAT TERM 362 365906 - 365927 + G 71 -8.1 -3.29593 | overlap 365904 AAATTTCAAAATCTG TCTCTAGTA GAGA TACTAGGGA TATTACTTCTACAAT dnaX 364540 - 366636 + | DNA polymerase III, tau and gamma subunits adk 367270 - 367923 + | ATP-AMP transphosphorylase TERM 363 368126 - 368115 - T 70 -4.4 -4.93547 | opp_overlap 368115 CTAATTAATCAAAAA CCAT AAAT ATGG ATATATTACTTGTAT TERM 364 368774 - 368758 - T 76 -5.3 -5.24531 | overlap 368764 ATTTCCCATAAAAAA TATATAT AAC ATATATA GATATATTACGATTA lpxH 369559 - 368807 - | UDP-2,3-diacylglucosamine hydrolase TERM 365 369028 - 369043 + g 95 -3.4 -6.50278 | opp_overlap 369033 TATCTGTAGCTATTT TTAAAT TAAT ATTTAA TTTTTTTTTTGATTT TERM 366 369332 - 369318 - G 82 -5 -5.4505 | TGTCCTAATAAAAAA TCATGA TTT CCATGA ATAAAATAACATGAA cysS 369936 - 371357 + | cysteinyl-tRNA synthetase folD 372261 - 371401 - | 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 367 372545 - 372523 - H 72 -8.6 -2.84634 | opp_overlap 372511, overlap 372528 GCGCATATCATCATA TGTAATTGAT CAC ACCAATTACA TAAATCAGTCTTAAT TERM 368 373263 - 373249 - g 72 -7.1 -3.90092 | opp_overlap 373251, overlap 373250 ACATCCACACAATAA GCCCA TGACT TGGGC TAATGCACAAGGCAT TERM 369 373251 - 373280 + G 83 -10.7 -3.17901 | opp_overlap 373249 373250 373278 ATCCACACAATAAGC CCATGACTTGGGC TAAT GCACAAGGCATGG TTACGTTACCACTAT TERM 370 373365 - 373379 + G 95 -5.6 -6.47325 | AATTTGCATTACCCT TCGGGC CTA GACCGA TTTTTTTTATTTTTT ytfF 372689 - 373630 + | putative cationic amino acid transport protein mrdB 375197 - 374085 - | rod shape-determining protein TERM 371 374422 - 374412 - G 76 -5.4 -5.0666 | opp_overlap 374412 CACTGAAAAAATAAA GTCA GTA TGAC GTTCTGGTAAAAATT mrdA 377112 - 375262 - | cell elongation-specific transpeptidase of penicillin-binding protein 2 ybeB 377551 - 377234 - | hypothetical protein TERM 372 377975 - 377958 - R 73 -4.3 -5.4505 | TTTTTTAATAAAAAA TTTAAAA ATTA TTTTAAA CACATCAATATAATC holA 379189 - 378161 - | DNA polymerase III, delta subunit TERM 373 378351 - 378361 + g 72 -2.6 -5.41746 | CAATGATACTTTCTA TATA TTT TATA TTTTTTTAACAAATT TERM 374 379234 - 379218 - R 82 -5.3 -5.63517 | opp_overlap 379211, overlap 379211 TGGTGAAATAAAAAA TTTATAT TAA ATATAAA AAATGATTTTACAAC rlpB 379818 - 379255 - | rare lipoprotein B precursor leuS 382441 - 379823 - | leucyl-tRNA synthetase TERM 375 382478 - 382507 + r 73 -4.5 -5.28176 | opp_overlap 382478 AAAAATGTTAATTAA TTAATAATTGTAG TTAA TTACAAATATTAA TTTTTTCTAAATAAA lnt 384249 - 382717 - | apolipoprotein N-acyltransferase ybeX 385136 - 384252 - | CBS regulatory domain-containing protein ybeY 385642 - 385169 - | hypothetical protein phoL 386745 - 385753 - | putative ATP-binding protein in pho regulon TERM 376 387013 - 387068 + H 78 -6.1 -4.7889 | gap 3, opp_overlap 387004 387002 387020, overlap 387016 387018 387023 GTAATATAACTGAAA GTTAAA-A--TAATTGCAATCATATGTC AAG GACATATGATTGCAATTAAATCTTTAAA TTTTTAAGTATTTAT TERM 377 387016 - 387062 + H 100 -12.6 -4.00407 | opp_overlap 387002 387020, overlap 387013 387018 387023 ATATAACTGAAAGTT AAAATAATTGCAATCATATGTC AAG GACATATGATTGCAATTAAATC TTTAAATTTTTAAGT TERM 378 387018 - 387060 + H 100 -15.2 -3.58159 | opp_overlap 387020, overlap 387016 387013 387023 ATAACTGAAAGTTAA AATAATTGCAATCATATGTC AAG GACATATGATTGCAATTAAA TCTTTAAATTTTTAA TERM 379 387058 - 387020 - H 100 -22.2 -4.37198 | opp_overlap 387018 387016 387013 387023 AACTGAAAGTTAAAA TAATTGCAATCATATGTC AAG GACATATGATTGCAATTA AATCTTTAAATTTTT TERM 380 387023 - 387055 + H 100 -19.5 -3.25137 | opp_overlap 387020, overlap 387018 387016 387013 TGAAAGTTAAAATAA TTGCAATCATATGTC AAG GACATATGATTGCAA TTAAATCTTTAAATT TERM 381 387970 - 387954 - g 91 -4.5 -6.06723 | overlap 387956 TGTTGGAAAAAAAAA TCGAAAA TAA TTTTCAA AAACAACTAGGTAAC ubiF 387214 - 388384 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase TERM 382 389228 - 389211 - T 71 -3.5 -5.51078 | overlap 389213 AAAATAAAAATAAAA TATTTCT GCAT AGAAACA TATATTACGAAGCTA nagA 390569 - 389409 - | N-acetylglucosamine-6-phosphate deacetylase TERM 383 389738 - 389712 - G 100 -12.4 -5.1471 | overlap 389708 389713 ATTAGAAAAAAGAAA TCGGGATCTAAT TTT ATTAGATCCCGC AGGACTAGTGGCATC TERM 384 389737 - 389713 - G 100 -15.9 -3.66386 | overlap 389712 389708 TTAGAAAAAAGAAAT CGGGATCTAAT TTT ATTAGATCCCG CAGGACTAGTGGCAT nagB 391383 - 390580 - | glucosamine-6-phosphate deaminase glnS 392299 - 393957 + | glutaminyl-tRNA synthetase fldA 394642 - 394115 - | flavodoxin FldA TERM 385 394455 - 394435 - G 72 -2.5 -5.50499 | opp_overlap 394437 394438, overlap 394437 394438 GTACAGGTAAAAAAA TATCCCAAT CAC ATTGGGGTT CTCCATAATACCAAG TERM 386 394452 - 394438 - G 74 -8.6 -3.21573 | opp_overlap 394438 394437, overlap 394437 394435 CAGGTAAAAAAATAT CCCAAT CAC ATTGGG GTTCTCCATAATACC TERM 387 394656 - 394675 + r 71 -6.6 -4.1472 | ATAGTATTCCAATCC TTTATGTT ACAT AACATAAA TTATATTTTTATAAT ybfF 395626 - 394862 - | alpha/beta-hydrolase domain-containing protein TERM 388 394939 - 394921 - G 74 -9.6 -2.54193 | opp_overlap 394921 CATTATCCCAATGCA CCCAATGC CCT GCATTAGG TATCATGCAAATGTG TERM 389 396388 - 396374 - g 72 -2.8 -5.49729 | opp_overlap 396376, overlap 396376 AATCATTCAAAAAAA GCTGAT GGT ATCATC ATTACATCTTCCCAT TERM 390 397590 - 397578 - g 70 -6.3 -4.32342 | opp_overlap 397578, overlap 397572 AAAAAGAAATAATAA GTATC ATC GATAC TATCATCAATCAATC pgm 395951 - 397609 + | phosphoglucomutase BPEN_336 398470 - 398327 - | hypothetical protein TERM 391 398573 - 398557 - H 81 -5.9 -5.10154 | ATTTAAAAGTAAAAA CATCAAT ACT ATTGACG CAAGGGATGCTGTTA sdhC 399359 - 399766 + | succinate dehydrogenase cytochrome b-556 subunit TERM 392 399824 - 399838 + G 74 -5.8 -4.64423 | overlap 399816 CCGTCTGGATGTTGC TATACA TCG TGTATA TTTCTATTTTTATTA sdhD 399742 - 400089 + | succinate dehydrogenase hydrophobic membrane anchor protein TERM 393 400499 - 400483 - g 90 -8 -4.8236 | TATGGAAAAAAACAA GCAGCA CGTAC TGCTGC AGCTGCTGATCGTAC TERM 394 401535 - 401518 - g 72 -8.5 -3.12605 | overlap 401517 TGTATGCAAAACAAT TTCTCTG TTTT CAGAGAA GAGCAAAAAATGCTG TERM 395 401643 - 401623 - g 73 -9.1 -2.94194 | opp_overlap 401623 401614, overlap 401614 GATAAATCTTATACA TTCAACACA CAA CGTGTTGAA TGCTTAGAATTAGAT sdhA 400090 - 401874 + | succinate dehydrogenase flavoprotein subunit sdhB 401891 - 402637 + | succinate dehydrogenase iron-sulfur subunit TERM 396 403054 - 403034 - g 74 -7.7 -3.92369 | overlap 403035 ATTTAAAAAATAACA CGTATTCTA AAT TAGAATACA ACATCGCATCTCGTG TERM 397 403053 - 403035 - g 73 -9 -2.93795 | overlap 403034 TTTAAAAAATAACAC GTATTCTA AAT TAGAATAC AACATCGCATCTCGT TERM 398 403421 - 403388 - g 95 -11.3 -3.93742 | gap 1, opp_overlap 403385, overlap 403390 TTGATATAAATATAA TACTGTGGATTCAAAA TCA CTTTGAATCCACAG-A GGGAATGTTTAAGTT TERM 399 403420 - 403390 - g 100 -16.4 -3.54885 | opp_overlap 403385, overlap 403388 GATATAAATATAATA CTGTGGATTCAAAA TCA CTTTGAATCCACAG AGGGAATGTTTAAGT TERM 400 403474 - 403456 - g 100 -9 -5.48063 | opp_overlap 403456 403459, overlap 403447 AGTGAAGAGAAAAAA CAATTTCT CGA AGAAATTG TTTCGGCAGAAGGAA TERM 401 403456 - 403474 + G 78 -9 -3.53012 | opp_overlap 403447 403456, overlap 403459 AGTGAAGAGAAAAAA CAATTTCT CGA AGAAATTG TTTCGGCAGAAGGAA kgd 402838 - 405699 + | alpha-ketoglutarate decarboxylase sucB 405720 - 406964 + | dihydrolipoamide succinyltransferase E2 component TERM 402 407843 - 407829 - g 71 -8.6 -2.93901 | opp_overlap 407828 ATTTTATCAATTACA TTCCCT TGG AGGGAA ATATTGGCTGTATGG TERM 403 407906 - 407925 + G 75 -5 -5.03314 | opp_overlap 407906 GATGTAATTAAATCA TTAGGAGG GATT CCTGCTAA TTTTTTAGACATCGG sucC 407081 - 408256 + | succinyl-CoA synthetase, beta chain sucD 408240 - 409121 + | succinyl-CoA synthetase, alpha chain TERM 404 409801 - 409781 - gf 75 -4.8 -4.97158 | TTATATCAAACAAAA CATTGTTC ACCTG AAACAATG ATGTCTAGAACACTG TERM 405 409988 - 409968 - gf 71 -6.1 -4.23486 | overlap 409965 409969 AATTAGGTAAAACAA CGGCGAC TAACAAT GTCGCCA CTCAGATGATTCATA tolQ 409499 - 410248 + | hypothetical protein tolR 410217 - 410642 + | hypothetical protein TERM 406 411547 - 411537 - g 86 -4 -5.77677 | GAAAATAACAAAAAA TCTA AAT TAGA CTTGACAACAAAAAA tolA 410688 - 411872 + | hypothetical protein TERM 407 412439 - 412421 - g 91 -4.5 -5.9873 | opp_overlap 412421, overlap 412422 TCAGTAGAAAAAAAA TGGCTAC GCTAT GTAGCCC ATGCTATAAGCAATG TERM 408 412438 - 412422 - g 83 -8 -4.17611 | opp_overlap 412421, overlap 412421 CAGTAGAAAAAAAAT GGCTAC GCTAT GTAGCC CATGCTATAAGCAAT tolB 411950 - 413311 + | hypothetical protein pal 413371 - 413898 + | Pal TERM 409 413960 - 413946 - g 72 -7.2 -3.93578 | opp_overlap 413941 413946, overlap 413941 GTAAATTAAATATAA TCATCA TAA TGATGA TATATTTTAATATTA ybgF 413906 - 414691 + | putative periplasmic protein TERM 410 414784 - 414758 - T 100 -12.6 -5.28281 | opp_overlap 414753 ACAAAACAAATAAAA TTTACTAGAATT TTT AATTCTAGTAAA CATAAAGTTTTTCTT TERM 411 414870 - 414891 + T 77 -6.7 -4.62561 | opp_overlap 414872, overlap 414872 TGCAGCGATTCAATC TACCATTAT AATT ATAATGGTG TTATTTTATTTATTA TERM 412 414872 - 414889 + T 71 -7.1 -3.87927 | opp_overlap 414872, overlap 414870 CAGCGATTCAATCTA CCATTAT AATT ATAATGG TGTTATTTTATTTAT TERM 413 415153 - 415125 - T 70 -4.7 -4.9448 | opp_overlap 415126 415144, overlap 415127 415129 415144 ATGTACTAAACAAAA CATATACTCATAT GAT ATATGAGTACACT CATTTTACTCACAAA TERM 414 415151 - 415127 - T 84 -9.5 -4.08958 | opp_overlap 415126 415144, overlap 415125 415129 415144 GTACTAAACAAAACA TATACTCATAT GAT ATATGAGTACA CTCATTTTACTCACA TERM 415 415149 - 415129 - T 85 -9.9 -3.62235 | opp_overlap 415126 415144, overlap 415127 415125 415144 ACTAAACAAAACATA TACTCATAT GAT ATATGAGTA CACTCATTTTACTCA ybhE 416759 - 415746 - | 6-phosphogluconolactonase TERM 416 417179 - 417204 + G 71 -7.9 -3.41013 | opp_overlap 417177 417179 TGCGCTGGTAGAATA TTAAAAAAAAA TGGA TTTTTTTTTAA TTATGGATATACTTC gpmA 417047 - 417745 + | phosphoglycerate mutase 1 TERM 417 417730 - 417760 + F 71 -5.8 -4.73092 | opp_overlap 417730, overlap 417751 AAATACTGTTCAACA TTATTATTTAAA ATAATTA TTTAAATAATAA TTTATTTTCAGTTAT ybhL 417934 - 418644 + | putative transport protein TERM 418 418717 - 418664 - T 100 -35.9 -3.50219 | opp_overlap 418664 418667 418667 418670, overlap 418667 418670 418697 AATAGCCGCATATAA CAACAATAGCCCGGTCTATTGTTTC TATA GAAACAATAGACCGGGCTATTGTTG TTAACTACCCCAAAA TERM 419 418664 - 418717 + T 100 -35.9 -3.05384 | opp_overlap 418664 418667 418670 418697, overlap 418667 418667 418670 AATAGCCGCATATAA CAACAATAGCCCGGTCTATTGTTTC TATA GAAACAATAGACCGGGCTATTGTTG TTAACTACCCCAAAA TERM 420 418667 - 418714 + T 100 -31.8 -3.67597 | opp_overlap 418667 418664 418670 418697, overlap 418667 418664 418670 AGCCGCATATAACAA CAATAGCCCGGTCTATTGTTTC TATA GAAACAATAGACCGGGCTATTG TTGTTAACTACCCCA TERM 421 418714 - 418667 - T 100 -31.8 -3.885 | opp_overlap 418664 418667 418667 418670, overlap 418664 418670 418697 AGCCGCATATAACAA CAATAGCCCGGTCTATTGTTTC TATA GAAACAATAGACCGGGCTATTG TTGTTAACTACCCCA TERM 422 418670 - 418711 + T 100 -27.7 -3.97307 | opp_overlap 418670 418667 418664 418697, overlap 418667 418667 418664 CGCATATAACAACAA TAGCCCGGTCTATTGTTTC TATA GAAACAATAGACCGGGCTA TTGTTGTTAACTACC TERM 423 418711 - 418670 - T 100 -27.7 -4.06864 | opp_overlap 418667 418667 418664 418670, overlap 418667 418664 418697 CGCATATAACAACAA TAGCCCGGTCTATTGTTTC TATA GAAACAATAGACCGGGCTA TTGTTGTTAACTACC ychF 419830 - 418754 - | translation-associated GTPase pth 420517 - 419924 - | peptidyl-tRNA hydrolase prsA 421700 - 420762 - | ribose-phosphate pyrophosphokinase ispE 422673 - 421786 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 423287 - 422670 - | outer membrane lipoprotein precursor prfA 423967 - 425049 + | peptide chain release factor 1 hemK 425049 - 425885 + | N5-glutamine methyltransferase kdsA 426212 - 427045 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 424 427101 - 427087 - f 71 -2.9 -5.66229 | opp_overlap 427087 427092 ATTAATAATAAAAAA TTTTC TGATT GAAAA TCATTTTTTTAAAAA TERM 425 427092 - 427104 + F 79 -4.9 -5.40072 | opp_overlap 427087, overlap 427087 TAATAAAAAATTTTC TGATT GAA AATCA TTTTTTTAAAAAACC TERM 426 428355 - 428390 + F 95 -13.7 -3.16475 | opp_overlap 428355 TTTCTTCAAAATAAA TTATTATCCCTATAA TGTAAT TTATAGGGATAATAA TTGAATATATAAATG TERM 427 428390 - 428355 - f 100 -13.7 -4.64861 | opp_overlap 428355 TTTCTTCAAAATAAA TTATTATCCCTATAA TGTAAT TTATAGGGATAATAA TTGAATATATAAATG thrS 429232 - 430458 + | threonyl-tRNA synthetase TERM 428 430511 - 430489 - g 74 -6.4 -4.34951 | overlap 430486 GCAAAAAAAATACAA TCAATACGAC TAA ATCGTATTAA CAGAGAAATTAGTGC infC 430465 - 431004 + | translation initiation factor IF-3 rpmI 431067 - 431264 + | 50S ribosomal protein L35 rplT 431338 - 431700 + | 50S ribosomal protein L20 pheS 431885 - 432880 + | phenylalanine tRNA synthetase, alpha-subunit pheT 432894 - 435287 + | phenylalanine tRNA synthetase, beta-subunit lplA 435873 - 436892 + | lipoate-protein ligase A sufA 437376 - 437756 + | Fe-S cluster assembly protein TERM 429 438338 - 438354 + G 71 -2.3 -5.40474 | overlap 438339 TATTTAGGAACTGTA GTATCTT TTA AAGATAA TTTTTTTGCCGCACT sufB 437771 - 439267 + | cysteine desulfurase activator complex subunit SufB sufC 439324 - 440064 + | Fe-S cluster assembly ABC transporter ATP-binding protein sufD 440045 - 441334 + | cysteine desulfurase activator complex subunit SufD sufS 441331 - 442557 + | selenocysteine lyase TERM 430 442635 - 442599 - g 72 -2.5 -5.4505 | TTTTCCAACAAAAAA CCAATTATTACAA AATTTCTTAAG TTGTATTAATTGG GAAGAAAAATATATA sufE 442576 - 443004 + | SufE lpp 443359 - 443123 - | murein lipoprotein TERM 431 443822 - 443807 - H 71 -5.4 -4.7254 | ATGTTTTATTAAAAA CCACAC TTAT ATGTGG TAAAATACATGTAAT ribE 444000 - 444623 + | riboflavin synthase subunit alpha ydhD 444788 - 445120 + | hypothetical protein TERM 432 445123 - 445153 + T 70 -7 -3.67967 | opp_overlap 445122 445124 445125 445152, overlap 445124 TAATTTAAATTGAAT ATTTTAACTCTCTT TTA AAGAGAGTTAAACC TTGTGTGTCTGTATA TERM 433 445152 - 445124 - T 85 -10.5 -3.21465 | opp_overlap 445124 445123, overlap 445122 445125 AATTTAAATTGAATA TTTTAACTCTCTT TTA AAGAGAGTTAAAC CTTGTGTGTCTGTAT TERM 434 445124 - 445152 + T 83 -10.5 -2.80057 | opp_overlap 445122 445124 445125, overlap 445123 AATTTAAATTGAATA TTTTAACTCTCTT TTA AAGAGAGTTAAAC CTTGTGTGTCTGTAT TERM 435 445151 - 445125 - T 100 -14 -2.52156 | opp_overlap 445124 445123, overlap 445124 445122 ATTTAAATTGAATAT TTTAACTCTCTT TTA AAGAGAGTTAAA CCTTGTGTGTCTGTA TERM 436 445193 - 445152 - T 100 -19.1 -3.78962 | opp_overlap 445123, overlap 445122 445153 TTAAAGAGAGTTAAA CCTTGTGTGTCTGTATAGT AGCT ACTATACAGACACACAAAA CCTAGATAAGTGTAA TERM 437 445192 - 445153 - T 100 -20.4 -2.86654 | overlap 445122 445152 TAAAGAGAGTTAAAC CTTGTGTGTCTGTATAGT AGCT ACTATACAGACACACAAA ACCTAGATAAGTGTA rnt 445946 - 445293 - | ribonuclease T TERM 438 446488 - 446453 - H 91 -12.4 -3.08966 | opp_overlap 446457, overlap 446457 GTAAATTCCATTCAA TAAATTATTTTTAATA CTTG TATTAAAAATAATTTA CACCCAACAATAAAT TERM 439 446457 - 446484 + H 75 -8.8 -3.53091 | opp_overlap 446453 446457 ATTCCATTCAATAAA TTATTTTTAATA CTTG TATTAAAAATAA TTTACACCCAACAAT TERM 440 446484 - 446457 - H 81 -8.8 -4.20783 | opp_overlap 446457, overlap 446453 ATTCCATTCAATAAA TTATTTTTAATA CTTG TATTAAAAATAA TTTACACCCAACAAT TERM 441 447034 - 447059 + G 76 -6.3 -4.58283 | overlap 447036 TAATGAAGTAAATCG TGTCATTTCTA TCAC TAGAAATGAAA TTTTTAACGGAATTA TERM 442 447036 - 447057 + G 72 -8.9 -2.60211 | overlap 447034 ATGAAGTAAATCGTG TCATTTCTA TCAC TAGAAATGA AATTTTTAACGGAAT slyA 446720 - 447154 + | transcriptional regulator SlyA pdxH 447480 - 448130 + | pyridoxamine 5'-phosphate oxidase TERM 443 449002 - 448992 - g 77 -4 -5.36364 | GGAAAAACAGAAAAA CATA CTA TATG GTTAGATGCAAAAAA TERM 444 449378 - 449399 + G 77 -8.7 -3.59803 | overlap 449373 449379 ATCTAAATTAGTAGT GTCTCGTGC ACAA GCACGAGAA TTAATTTCATCTAAT TERM 445 449379 - 449398 + G 89 -12.2 -2.75159 | overlap 449378 449373 TCTAAATTAGTAGTG TCTCGTGC ACAA GCACGAGA ATTAATTTCATCTAA tyrS 448260 - 449543 + | tyrosyl-tRNA synthetase TERM 446 449625 - 449643 + T 100 -11.8 -5.05113 | TTTCCCGCAATACCT TACTACGC CAT GCGTAGTA TTTTATTTATGTAAC nth 450305 - 449664 - | endonuclease III TERM 447 449988 - 450006 + g 75 -8.2 -3.65996 | opp_overlap 449986, overlap 449986 449991 CAAACCAACACGATT TGACGGTA ATA TACCGTTA TATTTGTCTATCAAC TERM 448 449991 - 450003 + g 74 -7.7 -3.95348 | opp_overlap 449986, overlap 449988 449986 ACCAACACGATTTGA CGGTA ATA TACCG TTATATTTGTCTATC fumC 451802 - 450402 - | fumarate hydratase TERM 449 451838 - 451866 + H 71 -5.5 -4.64048 | opp_overlap 451838 TTATAAAATATTAAT TGATTTTATTAAT TAC ATTAATATGATCA TTTGTTTGTATCATA TERM 450 452115 - 452127 + G 74 -9.1 -3.08798 | opp_overlap 452115 452101, overlap 452103 TTGCTTGGTGTAACA CCCTC ACA GAGGG TATTAAATCCAACGT TERM 451 452127 - 452115 - g 74 -9.1 -3.01712 | opp_overlap 452103 452115, overlap 452101 TTGCTTGGTGTAACA CCCTC ACA GAGGG TATTAAATCCAACGT TERM 452 452646 - 452636 - g 70 -4 -4.93898 | opp_overlap 452636, overlap 452627 ACATCATTACAAAAA TGTA ACA TACA TTATCCAAGAAGTGG TERM 453 453089 - 453078 - g 74 -5.8 -4.64763 | GTACTCAAAAAATAA CAGG TTAT CCTG GAGAAATTAAAATAA TERM 454 454000 - 453955 - g 100 -14.3 -4.06055 | gap 1 ATTTGTCAAACTAAA TCTTGCGCAATCTTCTTCATCC ATT AG-CGAAGAAGATTGCGCAACA GACGATAGTAGCGAT eaeH 452045 - 454054 + | putative adhesin ubiX 454788 - 454174 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase kdsB 455906 - 455118 - | 3-deoxy-manno-octulosonate cytidylyltransferase ycaR 456085 - 455918 - | hypothetical protein TERM 455 456185 - 456195 + r 75 -2.6 -6.06529 | opp_overlap 456193 AATAATTTTATCATT TAAA TAA TTTA TTTTTTTTATATATG lpxK 457309 - 456296 - | tetraacyldisaccharide 4'-kinase TERM 456 456594 - 456578 - G 72 -3.7 -5.243 | TAAAGTATCAAAAAA TTGTGTA GGA TACCCAA TCCCTGCTATAGCTA TERM 457 456923 - 456911 - G 73 -7.7 -3.61398 | TTGTTTTCTCAATAA TGCAG CAA CTGCA TCAGCACGTTTTGGA TERM 458 457173 - 457153 - G 77 -9.9 -2.76261 | opp_overlap 457172, overlap 457152 457155 CTCCAATTGTTAAAT TACCAATAA TTA TTATTGGTA CCGAAAATCGATATA msbA 459063 - 457309 - | lipid transporter ATP-binding/permease protein rpsA 461462 - 459768 - | 30S ribosomal protein S1 TERM 459 459958 - 459979 + g 74 -2.3 -5.64274 | overlap 459948 459960 GCTAATATATCATTG CCTATGTGT AATG ACATATATG TTTTTTTATGAGTAG cmk 462256 - 461537 - | cytidine monophosphate (CMP) kinase TERM 460 461586 - 461564 - G 79 -10 -2.82635 | overlap 461566 461582 ATGCGTAGTATTATA TAGTACTCTC GAT GAGAATACTA GACTCTCTCTAATAT aroA 463683 - 462385 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 461 462513 - 462500 - G 74 -3.1 -5.33405 | overlap 462502 GCCACCAAAGAAAAA CACAT CGCT ATGCG ATGATCATCGTAAGT TERM 462 462516 - 462502 - G 93 -10 -4.29436 | overlap 462500 CACCAAAGAAAAACA CATCGC TAT GCGATG ATCATCGTAAGTATT TERM 463 463026 - 463011 - G 81 -4 -5.55769 | CTTTACAATAAAAAA CACGAT AATT ATCATG TTGTATGTTGATTCC TERM 464 463233 - 463205 - G 85 -11.2 -3.28791 | gap 1 ATTTCGCCTCCATAA TACCCT-CCATAC AATC GTATGGGAGGGTA ACCATTACGTTCCAT serC 464903 - 463815 - | phosphoserine aminotransferase serS 466527 - 465241 - | seryl-tRNA synthetase TERM 465 466909 - 466889 - R 90 -11.3 -3.65996 | overlap 466887 CCTCATATATAAACA CACCTATAT AAT ATATAGGTG ATCACGTGAAAACAA lolA 467929 - 467312 - | LolA ftsK 470428 - 468047 - | cell division protein TERM 466 469413 - 469427 + g 88 -7.2 -4.98468 | opp_overlap 469411 ATTACATTTAAATCT TGTATC AAG GATACA TTATTTTTTTGTTCT TERM 467 469517 - 469483 - G 74 -7.4 -3.96624 | opp_overlap 469483 TATTGCTACTACAAA TTGTTTTGTCAAATTT ATT AATTTTTACAAAACAA TTTTTTCCTTTAGAA TERM 468 469483 - 469517 + g 100 -7.4 -5.37593 | opp_overlap 469483 TATTGCTACTACAAA TTGTTTTGTCAAATTT ATT AATTTTTACAAAACAA TTTTTTCCTTTAGAA trxB 471064 - 472020 + | thioredoxin reductase infA 472511 - 472729 + | translation initiation factor IF-1 oprC 475041 - 472885 - | OprC TERM 469 473520 - 473538 + g 74 -6 -4.67641 | ACGCTCCGATATCTA CCTGAACA GTT TTTTCAGG TTTTAATTTTAAAAT TERM 470 474764 - 474748 - G 75 -9.5 -2.93113 | overlap 474745 AATTACATACAACGA CTGCAAA GAT TTTGCAG GAGAATCACTAAAAA yqeI 475612 - 476250 + | transcriptional regulator TERM 471 476540 - 476559 + T 79 -8 -4.16016 | opp_overlap 476527 476542, overlap 476527 ATTCAACAATCATTA TAGTTGAT GTCT ATCAACTA TTTATTAAAAAATAA TERM 472 476712 - 476673 - T 100 -11 -5.56112 | gap 1, opp_overlap 476684, overlap 476680 ATAAAAATTAAAAAA TTATTAAGAGAGCTCCCCA GAA TAGAGAGCTCTCT-AACAA AATATAAATCAATCA TERM 473 476706 - 476680 - T 100 -13.8 -3.4486 | opp_overlap 476684, overlap 476673 TTAAAAAATTATTAA GAGAGCTCCCCA GAA TAGAGAGCTCTC TAACAAAATATAAAT emtA 477819 - 477175 - | membrane-bound lytic murein transglycosylase E TERM 474 478071 - 478054 - R 72 -8.5 -2.949 | opp_overlap 478055, overlap 478042 478040 ATATTAAAAAATTGA CTGTTCT GTAT AGAACAG AACATTTATTTCTTT TERM 475 478055 - 478075 + r 90 -8.4 -4.78326 | opp_overlap 478054 478042 478040 TATTAAAAAATTGAC TGTTCTGT ATAGA ACAGAACA TTTATTTCTTTAACA mntR 478741 - 478280 - | manganese transport regulator MntR TERM 476 478337 - 478313 - G 70 -6.5 -4.28069 | AGAGAATTGAATAAA TGCCAACAATG TTT CATTGCTAACA TGATGCTCGATACCT TERM 477 479037 - 479013 - H 71 -5.9 -4.27843 | opp_overlap 479016, overlap 479010 479016 CTTAAATAGAAAGAA CAATTATCTAA ATA TTAGATAATTT TTTTAATATATCTTT TERM 478 479034 - 479016 - H 78 -7.6 -4.22749 | opp_overlap 479016, overlap 479013 479010 AAATAGAAAGAACAA TTATCTAA ATA TTAGATAA TTTTTTTAATATATC TERM 479 479016 - 479034 + H 100 -7.6 -5.60864 | opp_overlap 479016 479013 479010 AAATAGAAAGAACAA TTATCTAA ATA TTAGATAA TTTTTTTAATATATC trmU 479466 - 480569 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 480 481979 - 481995 + G 70 -7.3 -3.58533 | opp_overlap 481979 GCTAAACTTCCAATA TCGCGTT GGC AACGTGA TTTAAGCGATTCTAC purB 480986 - 482368 + | adenylosuccinate lyase lolE 483836 - 482601 - | outer membrane lipoproteins ABC transporter membrane protein lolD 484548 - 483847 - | outer membrane lipoproteins ABC transporter ATP-binding protein lolC 485746 - 484541 - | outer membrane lipoproteins ABC transporter membrane protein ycfM 486525 - 485989 - | putative fibronectin-binding protein TERM 481 486389 - 486401 + g 76 -3.5 -5.36965 | AAAACCGGTTGCCAA TTAAT TAA ATTAA TTTTTTGTGGTATTA ycfF 487065 - 486715 - | putative protein kinase C inhibitor TERM 482 487000 - 487016 + g 74 -5.9 -4.55016 | AGTAACTAACTCATC CTGATAT AAT ATATCGG TTTTGACTTTTTTGT TERM 483 487025 - 487049 + g 75 -8.1 -3.67368 | overlap 487024 ATATCGGTTTTGACT TTTTTGTGAAT AAT ATTCATAAAAA TATTGTCTTTTTTCA ycfH 488124 - 487339 - | putative metallo-dependent hydrolase holB 489142 - 488141 - | DNA polymerase III, delta prime subunit tmk 489787 - 489149 - | thymidylate kinase TERM 484 489674 - 489645 - G 72 -3.5 -5.15381 | gap 1, opp_overlap 489651 489652, overlap 489652 AATACACGTAAAAAA TC-CGAAACCGGCG TCC CTCCGGGTTCATGA GTGGTCAAAATATCG pabC 490980 - 490159 - | 4-amino-4-deoxychorismate lyase TERM 485 490765 - 490781 + g 85 -8 -4.55295 | opp_overlap 490765 ATATATATCACTATA TGCAGC TGCTT GCTGCA TTTCTTTATACAGAA acpP 491851 - 491600 - | acyl carrier protein fabG 492714 - 491980 - | 3-oxoacyl-[acyl-carrier protein] reductase TERM 486 492100 - 492121 + g 82 -2.4 -6.02919 | TCCAAAACGATTAAC TGGTATTT GTAATA AAATATCA TTTTTTTGTTTATCA fabD 493685 - 492744 - | malonyl CoA-acyl carrier protein transacylase fabH 494662 - 493709 - | 3-oxoacyl-(acyl carrier protein) synthase III plsX 495696 - 494668 - | putative glycerol-3-phosphate acyltransferase PlsX rpmF 495897 - 495727 - | 50S ribosomal subunit protein L32 rluC 497810 - 496794 - | ribosomal large subunit (23S) pseudouridine synthase C rne 498327 - 500927 + | ribonuclease E TERM 487 501575 - 501563 - g 93 -4.9 -5.95946 | overlap 501555 501552 TCAAGAACAAAAAAA TTTGT TCA ACAAA AATTGTGAATCGATA lpxL 501333 - 502256 + | lipid A biosynthesis lauroyl acyltransferase TERM 488 502236 - 502246 + F 73 -6.8 -4.2772 | AAAACCCGTCCTCCT GGAG AAT CTCC TTTATATTAATTAAA TERM 489 503082 - 503072 - g 95 -5.4 -6.32216 | overlap 503077 ACACATAAAAAAAAA TCCA ATT TGGA TCCCTACCAAAAGTA ybiS 502631 - 503579 + | hypothetical protein TERM 490 503658 - 503690 + T 70 -7.4 -3.49687 | opp_overlap 503654 503658 503675 503676, overlap 503657 TATCAAATCAATTTA TTTTTGAATAAAAA CCATT TTTTTATTTAAAAA ATTTTTATCACACAT TERM 491 503861 - 503847 - T 73 -8.6 -3.02739 | TTGAACCGAGATATA CGGATT TGC AATCCG ATGCATGACCACTCT pgsA 504866 - 504315 - | phosphotidylglycerophosphate synthetase TERM 492 504905 - 504922 + H 71 -8.5 -2.71325 | opp_overlap 504904 504902 504897, overlap 504902 ACAAAATTAAAATGT TAGCTCT TAAA AGAGCTA TAACTTTATAAATAC TERM 493 505904 - 505892 - H 74 -3.5 -5.58454 | opp_overlap 505892 CGTATAGCAAAAAAA TTAAA TGG TTTAA ATTATTAATTTAATA yccK 506144 - 506473 + | putative sulfite reductase yccV 506681 - 506998 + | hypothetical protein fabA 507833 - 508351 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase asnC 508697 - 510109 + | asparaginyl-tRNA synthetase aspC 510328 - 511533 + | aromatic amino acid aminotransferase TERM 494 511562 - 511603 + T 100 -17.9 -3.85698 | opp_overlap 511569, overlap 511540 AAGATGGTTGGTGGA TATTTAATGCATTTATTTT AATT AAAATAAATGCATTAAATA TTTATAAAACACAAA TERM 495 511596 - 511569 - T 86 -11.6 -3.12351 | opp_overlap 511562 TTGGTGGATATTTAA TGCATTTATTTT AATT AAAATAAATGCA TTAAATATTTATAAA ycbL 512354 - 511701 - | metallo-hydrolase/oxidoreductase domain-containing protein TERM 496 512189 - 512171 - G 70 -8.2 -3.16191 | overlap 512182 CCATAGCGCTACCAA CATGATCA AAG TGACCATG AGTCAATAAAATTTT fabI 513398 - 512610 - | enoyl-[acyl-carrier-protein] reductase (NADH) TERM 497 515001 - 514981 - H 71 -6.3 -4.19624 | opp_overlap 514986, overlap 514984 TATTTGTAATATAAA TAACACATA TAA TATATGTTA TTAAAAAATTAAACA TERM 498 515337 - 515323 - g 71 -8.6 -2.86838 | opp_overlap 515323, overlap 515318 TATATGGAAATATCA CTGGAT CAG ATCCAG TATTAACACGAATAC TERM 499 515323 - 515337 + G 72 -8.6 -3.02144 | opp_overlap 515318 515323 TATATGGAAATATCA CTGGAT CAG ATCCAG TATTAACACGAATAC ribA 515202 - 515801 + | GTP cyclohydrolase II TERM 500 516215 - 516199 - f 70 -8.1 -3.07455 | overlap 516201 TTATCATAAATTACA CATACTT TCA AAGTATG AAAAATATCTACAAA TERM 501 516736 - 516720 - f 71 -8.1 -3.31726 | opp_overlap 516720 516723 516729, overlap 516718 516723 516729 516730 TTTCTCTATAGAACA CAACTAA TAT TTAGTTG TTAACTAACCTTAAT TERM 502 516720 - 516736 + F 70 -8.1 -3.08173 | opp_overlap 516720 516718 516723 516729 516730, overlap 516723 516729 TTTCTCTATAGAACA CAACTAA TAT TTAGTTG TTAACTAACCTTAAT TERM 503 517356 - 517318 - f 73 -6.5 -4.28111 | gap 1, opp_overlap 517323 517353, overlap 517321 517323 517353 TATACTATCAACAAA CAATATTAGTATTTATAT TATA ATATAAATACTAAT-TTA ATAACATTTTATCCA TERM 504 517354 - 517321 - f 81 -8.5 -4.25016 | opp_overlap 517323 517353, overlap 517318 517323 517353 ACTATCAACAAACAA TATTAGTATTTATAT TATA ATATAAATACTAATT TAATAACATTTTATC TERM 505 517323 - 517352 + F 93 -11.1 -3.79021 | opp_overlap 517323 517321 517318 TATCAACAAACAATA TTAGTATTTATAT TATA ATATAAATACTAA TTTAATAACATTTTA TERM 506 517352 - 517323 - f 90 -11.1 -3.71448 | opp_overlap 517323, overlap 517321 517318 TATCAACAAACAATA TTAGTATTTATAT TATA ATATAAATACTAA TTTAATAACATTTTA TERM 507 517843 - 517825 - f 75 -6.2 -4.6856 | opp_overlap 517824 517833 CAAATACTGTAAAAA TTTTTATT TTT AATAAAAA GTAGCTTACTAGTTA TERM 508 518015 - 517980 - f 100 -15.2 -3.09655 | opp_overlap 517987, overlap 517984 517987 TTATATACACATATA TTAATAACATAAATAG TTAA CTATTTATGTTATTAA ACACAATCTTAATCT TERM 509 518011 - 517984 - f 87 -11.6 -3.37057 | opp_overlap 517987, overlap 517980 517987 ATACACATATATTAA TAACATAAATAG TTAA CTATTTATGTTA TTAAACACAATCTTA TERM 510 517987 - 518008 + F 80 -8.9 -3.61715 | opp_overlap 517987 517984 517980 CACATATATTAATAA CATAAATAG TTAA CTATTTATG TTATTAAACACAATC TERM 511 518008 - 517987 - f 82 -8.9 -3.81089 | opp_overlap 517987, overlap 517984 517980 CACATATATTAATAA CATAAATAG TTAA CTATTTATG TTATTAAACACAATC TERM 512 518295 - 518281 - f 73 -4.4 -5.14477 | opp_overlap 518281 CACATATCTAAAAAA TATATT CAT AATATA TTTCACGTGCGTATA TERM 513 518550 - 518515 - f 100 -12.2 -4.07868 | opp_overlap 518520 518522 518542, overlap 518518 TGATATTTATAGAAA TAATAGACAGATTATT CATT AATAAGCTGTCTATTA AAAAATAGATATAAA TERM 514 518547 - 518518 - f 86 -9.5 -4.15698 | opp_overlap 518520 518522 518542, overlap 518515 TATTTATAGAAATAA TAGACAGATTATT CATT AATAAGCTGTCTA TTAAAAAATAGATAT TERM 515 518647 - 518637 - f 88 -4 -6.3578 | opp_overlap 518640 518643, overlap 518640 ATTTTAAAAAAAAAA TAGT ATT ACTA ATATCATTAGCATTC trpE 518841 - 520403 + | anthranilate synthase component I trpG 520406 - 521002 + | anthranilate synthase component II trpD 521004 - 522029 + | anthranilate phosphoribosyltransferase trpC 522007 - 523380 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 516 523862 - 523849 - g 74 -5.3 -4.75063 | ATAAAACGTCAAAAA CTCAA CGTT TTGAG AATGCAATTAATGGG trpB 523423 - 524613 + | tryptophan synthase subunit beta trpA 524616 - 525446 + | tryptophan synthase subunit alpha TERM 517 526136 - 526160 + G 77 -4.3 -5.24129 | opp_overlap 526136 TATCTGCTGCTAATA GTATTTCTAAG CTT CTAAGTAATAC TTTTTTATGCGGAAA yciC 525901 - 526638 + | hypothetical protein TERM 518 526810 - 526785 - T 73 -9.3 -2.60194 | opp_overlap 526792, overlap 526784 526788 ACCTGCGCAATCAAT TTATTAACATA ACCA TATGTTAATAA TCACTAAAAATTTTT tonB 527532 - 526804 - | energy transducer; uptake of iron, cyanocobalimin; sensitivity to phages, colicins TERM 519 527194 - 527209 + g 95 -4.8 -6.48081 | opp_overlap 527192 AGCATTGAATTTATA TTTAGA ACTA TCTAAA TTTTTTTTTTCTGAA TERM 520 527326 - 527342 + g 71 -8.1 -3.18602 | opp_overlap 527329, overlap 527329 TTGACTAGTTTGCAG TAATGAC AAT GTCATTA TATTAGATCTTTGCT TERM 521 527433 - 527390 - G 87 -10 -3.91959 | gap 1, opp_overlap 527393 527403 527405, overlap 527398 527401 ACAGAATGATAACAA TGATGTAATAATACATGCATT ATA AATGCATGTATTAC-ACATGA TAAAAAACAACAAAA TERM 522 527426 - 527398 - G 100 -14.9 -3.16822 | opp_overlap 527393 527403 527405, overlap 527390 527401 ATAACAATGATGTAA TAATACATGCATT ATA AATGCATGTATTA CACATGATAAAAAAC TERM 523 527423 - 527401 - G 95 -12.2 -3.71255 | opp_overlap 527393 527403 527405, overlap 527398 527390 ACAATGATGTAATAA TACATGCATT ATA AATGCATGTA TTACACATGATAAAA TERM 524 527403 - 527421 + g 83 -10.4 -3.04792 | opp_overlap 527401 527398 527390, overlap 527393 527405 AATGATGTAATAATA CATGCATT ATA AATGCATG TATTACACATGATAA TERM 525 528982 - 529017 + G 100 -12.7 -3.15579 | opp_overlap 528982 GACATACTATTCAAA TTATTCCCTCTGGAC CAGGAT GCCCGGAGGGAATAA TTCATCAAGCATTAC TERM 526 529017 - 528982 - g 100 -12.7 -3.70863 | opp_overlap 528982 GACATACTATTCAAA TTATTCCCTCTGGAC CAGGAT GCCCGGAGGGAATAA TTCATCAAGCATTAC cls 528045 - 529514 + | cardiolipin synthetase tdk 530577 - 529960 - | thymidine kinase hns 531205 - 531615 + | global DNA-binding transcriptional dual regulator H-NS TERM 527 533129 - 533143 + F 73 -8.6 -3.07043 | opp_overlap 533129, overlap 533136 533140 533142 CTACAGATTACTAAA GCTCAT TTT ATGAGC TATTACAATAATAGC TERM 528 533143 - 533129 - f 79 -8.6 -3.83409 | opp_overlap 533129 533136 533140 533142 CTACAGATTACTAAA GCTCAT TTT ATGAGC TATTACAATAATAGC TERM 529 533142 - 533158 + F 70 -8.1 -3.12352 | opp_overlap 533129, overlap 533129 533140 533136 AAGCTCATTTTATGA GCTATTA CAA TAATAGC TGTAATTTTCAATTA TERM 530 533964 - 533954 - g 82 -2.6 -5.96219 | opp_overlap 533954 TATGTACAAAAAAAA TTTT TAT AAAA GTTTCCAAAACTACG xthA 533574 - 534380 + | exonuclease III TERM 531 535412 - 535398 - g 70 -7.2 -3.61075 | AATATATTAAATGAA TTGCAT CGA ATGCAA GGCGATACTGCAGCT sppA 534585 - 536462 + | protease IV TERM 532 536692 - 536635 - f 100 -14.8 -4.81083 | opp_overlap 536644 536651, overlap 536640 CGTAACTATCAAAAA TTAAATATATTACATATTAGTGATAT GATATT ATATCACTAATATGTAATATATAAAA TATCAAAAACATCAA TERM 533 536687 - 536640 - f 100 -19.1 -4.35327 | opp_overlap 536644 536651, overlap 536635 CTATCAAAAATTAAA TATATTACATATTAGTGATAT GATATT ATATCACTAATATGTAATATA TAAAATATCAAAAAC TERM 534 536644 - 536683 + F 100 -16.2 -2.90763 | opp_overlap 536640 536635, overlap 536651 CAAAAATTAAATATA TTACATATTAGTGATATG ATAT TATATCACTAATATGTAA TATATAAAATATCAA TERM 535 536651 - 536676 + F 73 -8.5 -2.99545 | opp_overlap 536640 536635, overlap 536644 TAAATATATTACATA TTAGTGATATG ATAT TATATCACTAA TATGTAATATATAAA gapA 536840 - 537838 + | glyceraldehyde 3-phosphate dehydrogenase A TERM 536 537971 - 537929 - f 70 -7.2 -3.59315 | opp_overlap 537929 537932, overlap 537932 TTAATGACTTTCAAA TAAGAGATGTTATCTCTGCA ACA TCCTCAAATAACATCTCTTA TCAATTGGATATTTG TERM 537 538259 - 538289 + F 74 -2.1 -6.04324 | gap 1, opp_overlap 538259 538268 TATCATATATAACAA TTTAATATACAACA GATT TGTTG-ATATCAAA TTTTTTATTTTTTCA TERM 538 538845 - 538820 - g 81 -9.9 -3.13164 | opp_overlap 538816, overlap 538823 TTGCTAACTACTTAA TAATAGCGATA CTCG TATCGCTATCA CAAATTATTGATCTC TERM 539 538842 - 538823 - g 82 -9.4 -3.70853 | opp_overlap 538816, overlap 538820 CTAACTACTTAATAA TAGCGATA CTCG TATCGCTA TCACAAATTATTGAT dsbB 538357 - 538881 + | disulfide bond formation protein B TERM 540 539703 - 539682 - g 77 -3.1 -5.58179 | CATTAGAAGAAAAAA TAAAAAAAG CTCC CTTTTTTTT ATTAAAAAACACTCC minC 539585 - 540265 + | hypothetical protein minD 540291 - 541103 + | hypothetical protein minE 541111 - 541374 + | cell division topological specificity factor TERM 541 541551 - 541537 - T 71 -2.2 -5.8187 | overlap 541529 TATCCAATAAAAAAA TTTTTA TTA CAAAAA TCCAAATTACAGTAA yeaZ 542448 - 541729 - | glycoprotein endopeptidase actin-like ATPase domain TERM 542 541961 - 541975 + g 74 -8.6 -3.34223 | overlap 541957 AAGTTACTCTGTAGC TTCTGG GAA CCAGAA TATATTAATTTTTTT TERM 543 542285 - 542268 - G 72 -7.1 -3.86252 | opp_overlap 542283 CTCTATTAAATACAA TACAATC CAAG GATTGTA AGGTAACACCTACTT TERM 544 543084 - 543064 - g 81 -4.1 -5.52986 | overlap 543066 543068 ATCTTACTAAAAAAA TATATTCAT ATC ATGAATATG AAACCAGAAAATAAC TERM 545 543082 - 543066 - g 78 -6.7 -4.40552 | overlap 543064 543068 CTTACTAAAAAAATA TATTCAT ATC ATGAATA TGAAACCAGAAAATA TERM 546 543975 - 543944 - g 85 -8.2 -4.59773 | TTGGAGCCCCAAAAA TTCAAGTTATGCAA TTAA TTGAACAACTTGAA CCACAACGCCGGAAC pabB 542815 - 544203 + | aminodeoxychorismate synthase subunit I yoaE 545824 - 544268 - | putative transmembrane protein TERM 547 544915 - 544895 - G 71 -8.3 -3.23274 | TTTTTGAGAATCTAA CCACGAAAT TTC ATTTCGAGG AGTCATTATGCTTCG TERM 548 545661 - 545639 - G 95 -12.2 -3.64541 | opp_overlap 545642 545645, overlap 545637 545642 545645 CCATGAAATCAAAGA TAATAATGCG ATA CGCATTATTA ATGCTAACGTTAACC TERM 549 545658 - 545642 - G 83 -9.5 -3.93578 | opp_overlap 545642 545645, overlap 545639 545637 545645 TGAAATCAAAGATAA TAATGCG ATA CGCATTA TTAATGCTAACGTTA TERM 550 545642 - 545658 + g 78 -9.5 -3.22223 | opp_overlap 545639 545637 545642 545645, overlap 545645 TGAAATCAAAGATAA TAATGCG ATA CGCATTA TTAATGCTAACGTTA TERM 551 545655 - 545645 - G 71 -6.8 -4.06096 | opp_overlap 545645 545642, overlap 545642 545639 545637 AATCAAAGATAATAA TGCG ATA CGCA TTATTAATGCTAACG TERM 552 546330 - 546290 - H 100 -21.7 -4.90906 | opp_overlap 546293, overlap 546318 GGATAACATTAAAAA CAATTCCTTGTTATTTTAA GAA TTAAAATAACAAGGAATTG CTAAAAACATACAAA TERM 553 546293 - 546327 + H 100 -17.6 -3.14564 | opp_overlap 546290 546318 TAACATTAAAAACAA TTCCTTGTTATTTTAA GAA TTAAAATAACAAGGAA TTGCTAAAAACATAC TERM 554 546452 - 546440 - g 74 -6.3 -4.37502 | ATGATCATAGGAAAA CAACA AAA TGTTG CATGGGTTGATCTAT manX 546359 - 547342 + | PTS family enzyme IIA/enzyme IIB, mannose-specific TERM 555 547349 - 547329 - f 79 -2.7 -6.15536 | overlap 547333 AATTAATAAAAAAAA TAAATAATT CTT AATTAATTA GATGTACAATTTTAT TERM 556 547345 - 547333 - f 71 -3.5 -5.42458 | overlap 547329 AATAAAAAAAATAAA TAATT CTT AATTA ATTAGATGTACAATT manY 547418 - 548227 + | PTS family enzyme IIC, mannose-specific manZ 548254 - 549120 + | mannose-specific PTS system protein IID cspC 549661 - 549452 - | cold shock-like protein CspC TERM 557 550160 - 550186 + r 73 -3.9 -5.42514 | opp_overlap 550146 ACATTGCACTCACAC TAAATGCTA CGGGTAAGA TAGCATTTA TTTTTTACTTTGTAA htpX 551205 - 550270 - | heat shock protein HtpX TERM 558 550755 - 550784 + g 70 -7.4 -3.72576 | gap 1, opp_overlap 550758, overlap 550758 GAATAAGAGTCATAG T-AATCATATCGC CAGAA GCGATATGATTCA TTTCATGAGCAACAA TERM 559 550758 - 550780 + g 85 -10.7 -3.56704 | opp_overlap 550758, overlap 550755 TAAGAGTCATAGTAA TCATATCGC CAGAA GCGATATGA TTCATTTCATGAGCA TERM 560 550780 - 550758 - G 88 -11.4 -3.29626 | opp_overlap 550758 550755 TAAGAGTCATAGTAA TCATATCGCC AGA AGCGATATGA TTCATTTCATGAGCA zwf 552921 - 551437 - | glucose-6-phosphate 1-dehydrogenase TERM 561 552985 - 553008 + H 82 -9.8 -3.73775 | opp_overlap 552990, overlap 552990 TATATAGGTAGGTTA TATAACAAGT ATAA ACTTGTTATA TTTAATCAAAATACA TERM 562 553205 - 553186 - H 76 -5.2 -5.14477 | overlap 553200 GACATATCCAAAAAA TTAATATT CCTA AATATTAA TAAAATATATAATAG TERM 563 554415 - 554404 - g 72 -5.8 -4.50902 | opp_overlap 554404, overlap 554409 AAAAAATAATACAAA GAGC ACGC GCTC TTAATCGCGCAGTCA pykA 553587 - 555035 + | pyruvate kinase A yebA 556562 - 555204 - | hypothetical protein TERM 564 556249 - 556233 - G 70 -8.1 -3.09681 | opp_overlap 556232 556230, overlap 556235 TAAAATTTTACTCAA TATCTCA TTC TGAGATA CTGTATAGTTATACA aspS 558577 - 556853 - | aspartyl-tRNA synthetase TERM 565 556980 - 556996 + g 76 -7.3 -4.28548 | opp_overlap 556961, overlap 556982 AATGCTAAACCAGCA TGTGGAG GCG CTCCATA TTTTAATGCATCCAT TERM 566 556982 - 556994 + g 73 -7.7 -3.745 | opp_overlap 556961, overlap 556980 TGCTAAACCAGCATG TGGAG GCG CTCCA TATTTTAATGCATCC TERM 567 558911 - 558866 - H 100 -20.9 -3.81019 | opp_overlap 558871, overlap 558871 ATAAATAATACACAA CAAAACCATATACAAGGATAC ATAT GTATCCTTGTATATGGTTTTT ATTTATGATATTTTT TERM 568 558906 - 558871 - H 100 -20.8 -4.90002 | opp_overlap 558871, overlap 558866 TAATACACAACAAAA CCATATACAAGGATAC ATAT GTATCCTTGTATATGG TTTTTATTTATGATA TERM 569 558871 - 558906 + H 100 -20.8 -5.40464 | opp_overlap 558871 558866 TAATACACAACAAAA CCATATACAAGGATAC ATAT GTATCCTTGTATATGG TTTTTATTTATGATA TERM 570 558942 - 558998 + H 84 -7.8 -4.85782 | gap 1, opp_overlap 558945, overlap 558944 558952 ATTACAAATAGAATT AAATCTTCAATTATATGTGAAATAAAA TATA TTTTATTTCACATATAATTGT-GACTA TTTATTTTTCAAAAA TERM 571 558944 - 558996 + H 91 -10.4 -4.04587 | gap 1, opp_overlap 558945, overlap 558942 558952 TACAAATAGAATTAA ATCTTCAATTATATGTGAAATAAAA TATA TTTTATTTCACATATAATTGT-GAC TATTTATTTTTCAAA TERM 572 558995 - 558945 - H 100 -13.9 -4.12405 | gap 1, opp_overlap 558944 558942 558952 ACAAATAGAATTAAA TCTTCAATTATATGTGAAATAAAA TATA TTTTATTTCACATATAATTGT-GA CTATTTATTTTTCAA TERM 573 558952 - 558989 + H 100 -16.1 -3.46874 | opp_overlap 558945, overlap 558944 558942 GAATTAAATCTTCAA TTATATGTGAAATAAAA TATA TTTTATTTCACATATAA TTGTGACTATTTATT TERM 574 559151 - 559137 - H 71 -5.8 -4.60073 | opp_overlap 559139 TATACAATTACAAAA TATAGT TTT ACTATA TATCAAAAATCAAAT TERM 575 559896 - 559878 - g 80 -6 -5.09245 | overlap 559880 559887 CTAAAATTACAAAAA GGCGATAA ACA TTATCGTC AAATATGGAAATATC TERM 576 559941 - 559887 - g 100 -11.8 -3.99013 | opp_overlap 559902 559908, overlap 559880 559878 559900 CAAAAAGGCGATAAA CATTATCGTCAAATATGGAAATATCT AGT AGATATTTCCATATTGAACAATCAGG ACATATACGTACGAT TERM 577 559928 - 559900 - g 100 -14.9 -3.59087 | opp_overlap 559902 559908, overlap 559887 AACATTATCGTCAAA TATGGAAATATCT AGT AGATATTTCCATA TTGAACAATCAGGAC TERM 578 559902 - 559926 + G 100 -13.1 -3.03124 | opp_overlap 559900 559887, overlap 559908 CATTATCGTCAAATA TGGAAATATCT AGT AGATATTTCCA TATTGAACAATCAGG TERM 579 560058 - 560042 - g 71 -2.9 -5.1287 | GTCAGATTTAAAAAA TAAAGGC TTA GCCGTCA CAAGTAATGGAGCTA argS 559209 - 560954 + | arginyl-tRNA synthetase mviN 562525 - 560978 - | putative virulence factor TERM 580 561327 - 561298 - G 88 -3.7 -5.98675 | overlap 561301 561323 TAGAAAAAGAAAAAA CAATATGCTTTAA TGTA TTAATGCATACTA AATTTATAAATTGAG TERM 581 561324 - 561301 - G 76 -5.4 -4.97159 | overlap 561298 561323 AAAAAGAAAAAACAA TATGCTTTAA TGTA TTAATGCATA CTAAATTTATAAATT TERM 582 561658 - 561672 + g 74 -8.6 -3.25823 | opp_overlap 561657 AACGAGATAAATATG GCACTA AAA TAGTGC TTAATGTCACACCAA yceL 563140 - 564363 + | multidrug resistance protein MdtH TERM 583 565080 - 565058 - T 70 -7.8 -3.41229 | ATATGGTTACTATAA GTACGACATT TAA AATGTCACAC AATACAACACATTTT TERM 584 565174 - 565160 - T 80 -8.6 -4.08945 | opp_overlap 565159 ATTATTTCTTTAAAA CGGTTT TCG AAACCG CTCCGTTCAACCACT gutQ 566615 - 565638 - | D-arabinose 5-phosphate isomerase TERM 585 566812 - 566794 - R 71 -6.8 -4.08578 | opp_overlap 566798, overlap 566796 566804 566806 AAACCCAACCAGAAA CACAGAAT AAC ATTCTGTA TCAAAATAATTAATA TERM 586 566810 - 566796 - R 70 -7.2 -3.62572 | opp_overlap 566798, overlap 566794 566804 566806 ACCCAACCAGAAACA CAGAAT AAC ATTCTG TATCAAAATAATTAA TERM 587 567000 - 567026 + r 88 -10.4 -3.67305 | AAACTCATTACCTCT GATACTTTATTT AGA AAATGAAGTATC TTACTTATTTATGTA yeeX 567432 - 567109 - | hypothetical protein TERM 588 569062 - 569052 - g 82 -2.6 -6.02345 | GAACTATAAAAAAAA TAAA TTA TTTA ATACAGATCAATCAA sbcB 567703 - 569205 + | exonuclease I TERM 589 569192 - 569212 + F 76 -4.9 -5.25735 | overlap 569190 569193 569202 TTTATGAAGTTCATT TTAATTTTT ATT AAAAATTAG TTTTTAATTTTTTCA TERM 590 569202 - 569219 + F 70 -4.3 -5.24989 | overlap 569190 569193 569192 TCATTTTAATTTTTA TTAAAAA TTAG TTTTTAA TTTTTTCATATATAC hisG 569725 - 570624 + | ATP phosphoribosyltransferase hisD 570629 - 571960 + | histidinol dehydrogenase TERM 591 572927 - 572902 - g 74 -7.7 -3.93262 | opp_overlap 572902 TTTTAAGAGATCAAA GCAATCAACCA GGAT TAGTTAATTGC TTGCGTATCACTGTC hisC 571938 - 573014 + | histidinol-phosphate aminotransferase hisB 573031 - 574101 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 574098 - 574687 + | imidazole glycerol phosphate synthase subunit HisH TERM 592 574849 - 574821 - g 70 -4.6 -4.8269 | overlap 574824 574826 GACAAGGAGCAAAAA TGATACATCTAG TTGAT CTAGATGGAGCA AAAAATCCATTAAAA hisA 574691 - 575431 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisF 575413 - 576189 + | imidazole glycerol phosphate synthase subunit HisF hisI 576183 - 576824 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 593 576889 - 576871 - T 78 -7.6 -4.17906 | opp_overlap 576878, overlap 576878 AATGAAACCAAACAA TTACTAAT GTC ATTAGTAA TGACATATATAATCA TERM 594 576894 - 576878 - T 71 -8.1 -3.35358 | opp_overlap 576878, overlap 576871 CCAAACAATTACTAA TGTCATT AGT AATGACA TATATAATCAATATT TERM 595 576997 - 577025 + T 100 -11.9 -3.83675 | opp_overlap 576987 577003 TAAATTGCGATATCT CCAATATCCCA CATATCA TGGGATATTGG TTATTACTTAAATTA gnd 578487 - 577078 - | 6-phosphogluconate dehydrogenase TERM 596 577894 - 577862 - G 100 -13.9 -3.68351 | opp_overlap 577858 577867, overlap 577867 GCTTCATGAGTTAAA TGAAATATATTTTTT ATA AAAAAATATATTTCA GCAATTATTTGCATA TERM 597 577867 - 577889 + g 75 -8 -3.59649 | opp_overlap 577862 577867, overlap 577858 ATGAGTTAAATGAAA TATATTTTTT ATA AAAAAATATA TTTCAGCAATTATTT TERM 598 577889 - 577867 - G 79 -8 -4.08887 | opp_overlap 577867 577858, overlap 577862 ATGAGTTAAATGAAA TATATTTTTT ATA AAAAAATATA TTTCAGCAATTATTT TERM 599 579011 - 578993 - H 83 -10.4 -2.73221 | opp_overlap 578993, overlap 578990 578995 TTAACAATTACAGTA TATGTCGT CAT ACGACATA TTTAAATTTTAAATC TERM 600 578993 - 579011 + H 91 -10.4 -3.9373 | opp_overlap 578993 578990 578995 TTAACAATTACAGTA TATGTCGT CAT ACGACATA TTTAAATTTTAAATC TERM 601 579009 - 578995 - H 72 -8.6 -2.90382 | opp_overlap 578993, overlap 578993 578990 AACAATTACAGTATA TGTCGT CAT ACGACA TATTTAAATTTTAAA metG 579039 - 580706 + | methionyl-tRNA synthetase TERM 602 581317 - 581287 - T 74 -7.1 -3.99461 | opp_overlap 581287 581290, overlap 581285 ACGAATCTAAAAACA TAATATGGATATA GATAT TAAATCCATATTA TTAATTAACACAAAT folE 582322 - 581657 - | GTP cyclohydrolase I rplY 583227 - 583520 + | 50S ribosomal protein L25 TERM 603 583771 - 583755 - T 76 -4.5 -5.40464 | overlap 583763 GATCACAAACAAAAA CTAAAAA TTA TTTTCAG GATAAAAATATACAG ddlA 585003 - 583897 - | D-alanine:D-alanine ligase A TERM 604 583978 - 583931 - G 72 -8.7 -3.10901 | opp_overlap 583931 583927, overlap 583929 AAATATTTCAATACA GCACCATCTACATGATAAAAA CAATTT TTTTTATCATGTAGATCTAGC GCTAATTCTACCAAT TERM 605 585030 - 585073 + r 100 -24.4 -3.83502 | opp_overlap 585030, overlap 585038 TGATACATTAAAAAA TACTAAAACAGGCGAATTAA TATT TTAATTCGCCTGTTTTAGTA TTTAATGTCGACCTA TERM 606 585073 - 585030 - R 100 -24.4 -5.24989 | opp_overlap 585030 585038 TGATACATTAAAAAA TACTAAAACAGGCGAATTAA TATT TTAATTCGCCTGTTTTAGTA TTTAATGTCGACCTA TERM 607 585038 - 585065 + r 100 -15.8 -4.51363 | opp_overlap 585030, overlap 585030 TAAAAAATACTAAAA CAGGCGAATTAA TATT TTAATTCGCCTG TTTTAGTATTTAATG omp 586213 - 585092 - | outer membrane protein gyrA 589448 - 586917 - | DNA gyrase, subunit A ubiG 589738 - 590430 + | 3-demethylubiquinone-9 3-methyltransferase TERM 608 590456 - 590428 - f 100 -16.3 -5.72207 | opp_overlap 590425 590424 GCTAAACTAAAAAAA TAATCGCTCTATA TGA TATAGAGCGATTA CAAATTAATAAATAA TERM 609 591997 - 592007 + G 70 -4 -4.95484 | opp_overlap 591997 ATCGAAAAATTAAAG CAAT AGA ATTG TTTTCTTTAATGATG TERM 610 593069 - 593091 + G 84 -10 -3.54543 | opp_overlap 593068 593066 593069 TAACCAATCAAATAT TTGTACAAGT GAT GCTTGTACAA TTTAGAAAAGTAACT TERM 611 593091 - 593069 - g 72 -9.3 -2.74696 | opp_overlap 593069, overlap 593068 593066 TAACCAATCAAATAT TTGTACAAG TGATG CTTGTACAA TTTAGAAAAGTAACT nrdA 590814 - 593096 + | ribonucleotide-diphosphate reductase subunit alpha nrdB 593153 - 594283 + | ribonucleotide-diphosphate reductase subunit beta yfaE 594258 - 594548 + | hypothetical protein nuoN 596141 - 594648 - | NADH dehydrogenase I chain N, membrane subunit TERM 612 595097 - 595078 - G 81 -2.2 -5.93809 | overlap 595085 595087 TGGGCATAAAAAAAA GATACTAT ATTG ATAATACC AAATGCACCAATACT nuoM 597716 - 596175 - | NADH dehydrogenase I chain M, membrane subunit TERM 613 596226 - 596207 - G 71 -2.1 -5.40474 | ATTCTTTTAAAAAAA GACAAAG ATTGTG CATTGTC ATATATGAAACATTC TERM 614 597708 - 597720 + g 88 -3.5 -5.98675 | opp_overlap 597696 597708 AAATATTAAGATAAT TAATA ACA TATTA TTTTTTGTTTTTCTC nuoL 599686 - 597800 - | NADH dehydrogenase I chain L, membrane subunit TERM 615 598024 - 597995 - G 83 -9.5 -3.88703 | overlap 597993 TGTTATAAATAAATA TGGCTTTATAAAT ATCA ATTTGTAAAGCCA ATCAAATCCCCATCC TERM 616 599032 - 599016 - G 74 -5.2 -4.74767 | ATAAGTAACATAAAA GATATC CATGT GATATC ATTAAAAATATGACA nuoK 599985 - 599683 - | NADH dehydrogenase I chain K TERM 617 599863 - 599851 - G 77 -7.7 -3.99324 | opp_overlap 599851 599852 TCCTACTATCACAAA TGCTG AAG CAGCA GCGTTAATCATAATT nuoJ 600533 - 599982 - | NADH dehydrogenase I chain J nuoI 601112 - 600567 - | NADH dehydrogenase subunit I nuoH 602108 - 601137 - | NADH dehydrogenase subunit H TERM 618 601550 - 601530 - G 79 -8.3 -3.96893 | overlap 601521 AATAAATCCTACAAA CTGAGGAAT TAC ATTCCACAG ATATAACTGATCTTC nuoG 604867 - 602108 - | NADH dehydrogenase subunit G nuoF 606315 - 604984 - | NADH dehydrogenase I chain F TERM 619 606235 - 606249 + g 82 -8.6 -3.96327 | AGATTTATATTCATG CAACCA TAC TGGTTG TTTATCGTCACGCAT nuoE 606833 - 606312 - | NADH dehydrogenase subunit E nuoCD 608637 - 606847 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 620 608281 - 608260 - G 82 -9.5 -3.57263 | opp_overlap 608260 608264 ATTCGCATTTGCAAA CACAGACAC TACT GTGTCTATG TATAGAGATTGCTCT nuoB 609385 - 608675 - | NADH dehydrogenase subunit B nuoA 609831 - 609391 - | NADH dehydrogenase I chain A TERM 621 610159 - 610129 - R 89 -11.6 -3.48276 | opp_overlap 610131 610133 610135, overlap 610142 610145 TGTTCTTGCACAGAA TATATATTATATAT AAC ATATATAATATATA TTACAGCGATCATGA TERM 622 610131 - 610157 + r 77 -9.8 -3.0263 | opp_overlap 610129 610142 610145, overlap 610133 610135 TTCTTGCACAGAATA TATATTATATAT AAC ATATATAATATA TATTACAGCGATCAT TERM 623 610133 - 610155 + r 70 -8 -3.07013 | opp_overlap 610129 610142 610145, overlap 610131 610135 CTTGCACAGAATATA TATTATATAT AAC ATATATAATA TATATTACAGCGATC TERM 624 610354 - 610366 + r 84 -6.3 -5.15526 | opp_overlap 610354 610353 AAAACATCTAACAAC CTAAG ATC CTTAG TTTTTAATTTTCTAT folC 611770 - 610496 - | dihydrofolate synthase TERM 625 610777 - 610813 + g 100 -11.8 -3.94404 | gap 1, overlap 610779 CTATGACCATTCTCA C-TTTACCTGTCCTTCT TTTA AGAAGGACAGGTAATCG TTTAGTTAAATAATT TERM 626 610779 - 610810 + g 100 -19 -3.02881 | overlap 610777 ATGACCATTCTCACT TTACCTGTCCTTCT TTTA AGAAGGACAGGTAA TCGTTTAGTTAAATA accD 612721 - 611837 - | acetyl-CoA carboxylase beta subunit truA 613857 - 613072 - | tRNA pseudouridine synthase A TERM 627 613188 - 613145 - G 100 -14 -3.74747 | opp_overlap 613143 613149, overlap 613147 TTAACTTCCACCAAA TATAGACCACTAGCTGGAGC TGTT ACACCAGCTAGTGATCTATT ACAATTTTCTAACAA TERM 628 613186 - 613147 - G 100 -16.6 -3.45592 | opp_overlap 613143 613149, overlap 613145 AACTTCCACCAAATA TAGACCACTAGCTGGAGC TGTT ACACCAGCTAGTGATCTA TTACAATTTTCTAAC TERM 629 613149 - 613184 + g 89 -11.9 -3.16437 | opp_overlap 613147 613145, overlap 613143 CTTCCACCAAATATA GACCACTAGCTGGAG CTGTTA CACCAGCTAGTGATC TATTACAATTTTCTA pdxB 615498 - 614374 - | erythronate-4-phosphate dehydrogenase TERM 630 615681 - 615643 - R 100 -11.5 -4.27259 | gap 1, opp_overlap 615650, overlap 615644 615646 TATACACATTTAAAA CTATACATTGTATTTTAT ACGC ATAAAATACAATGTAT-G ACACTAAAACCTTAT TERM 631 615681 - 615644 - R 86 -11.7 -3.15632 | opp_overlap 615650, overlap 615643 615646 ATACACATTTAAAAC TATACATTGTATTTTAT ACGC ATAAAATACAATGTATG ACACTAAAACCTTAT TERM 632 615679 - 615646 - R 100 -14.3 -3.13068 | opp_overlap 615650, overlap 615643 615644 ACACATTTAAAACTA TACATTGTATTTTAT ACGC ATAAAATACAATGTA TGACACTAAAACCTT TERM 633 615650 - 615675 + r 74 -9.3 -2.88544 | opp_overlap 615646 615643 615644 ATTTAAAACTATACA TTGTATTTTAT ACGC ATAAAATACAA TGTATGACACTAAAA fabB 616935 - 615721 - | 3-oxoacyl-[acyl-carrier-protein] synthase I TERM 634 616133 - 616110 - G 100 -14 -3.15999 | TTTTCATACATCGAA TTGCTCCTTC TCCA GAAGGAGCAA CCATATCACATCCAT TERM 635 618077 - 618094 + G 86 -11.3 -2.77007 | overlap 618074 GAGTGTTTATTCCTC GCTCTCC AATT GGAGAGC TAATTACATCATGTT yfcB 617740 - 618654 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase aroC 618679 - 619743 + | chorismate synthase TERM 636 619925 - 619937 + T 71 -6.3 -4.34353 | ATTTTAAAACAGTTC TATGC CAT GCATA TCTTTTTTATATATA TERM 637 620323 - 620295 - T 74 -8.4 -3.20941 | overlap 620320 TAGTAAGTAGTAAGA TATACTTATGTG ATAAA CACATAAATATA AACAATTATAAAAAT mntH 621778 - 620543 - | manganese transport protein MntH nupC 622114 - 623304 + | NupC family nucleoside transporter gltX 625171 - 623765 - | glutamate tRNA synthetase, catalytic subunit TERM 638 624083 - 624066 - G 74 -5.7 -4.67942 | TCGAATAAATCAAAA TCTATAT AAAA ATATAGA CAATTATTTACAATT ligA 627571 - 625784 - | DNA ligase TERM 639 627046 - 627090 + g 100 -13.3 -4.57569 | opp_overlap 627060, overlap 627050 TAAATACTTCTCCTC TAATTTCTAATAAATATGGTA ATT TACCATATTTATTAGAATCTA TTTTTAAACACATAG TERM 640 627050 - 627086 + g 100 -18.5 -3.53855 | opp_overlap 627060, overlap 627046 TACTTCTCCTCTAAT TTCTAATAAATATGGTA ATT TACCATATTTATTAGAA TCTATTTTTAAACAC TERM 641 627076 - 627060 - G 83 -8.1 -4.183 | opp_overlap 627050 627046 CTAATTTCTAATAAA TATGGTA ATT TACCATA TTTATTAGAATCTAT TERM 642 628259 - 628249 - g 71 -6.8 -4.04394 | CTTAAACTAATTAAA GCTC TAG GAGC CGAAATTATATTGAC TERM 643 628631 - 628597 - g 74 -5.2 -4.89567 | gap 1, opp_overlap 628597, overlap 628592 GGTCAAAACATAAAA CCAGCACCACATA AAATCCAAGG TAT-TGGTGCTGG TTTTGTTCCAAAAAA TERM 644 628597 - 628631 + G 71 -5.2 -4.63218 | gap 1, opp_overlap 628592 628597 GGTCAAAACATAAAA CCAGCACCACATA AAATCCAAGG TAT-TGGTGCTGG TTTTGTTCCAAAAAA cysK 627934 - 628881 + | cysteine synthase A TERM 645 628945 - 628917 - f 73 -4.8 -5.1615 | gap 1, opp_overlap 628915 628917 TTAACATTCAAAAAA TAGAAAACATTCA TGTA CGA-TGTTTTCTA TATTTATTTTTACAT ptsH 629267 - 629524 + | PTS family Hpr protein, phosphohistidinoprotein-hexose phosphotransferase TERM 646 629699 - 629681 - g 71 -3.2 -5.31456 | TCAATTTAGAAAAAA TCAATATT GGT ACTATTGA ACAAGAAATCAATCG TERM 647 630243 - 630224 - g 70 -8 -3.05709 | overlap 630223 630226 TAATTACAAAAAGAG TATCCAAT GGAG ATTGGATA ATACTCGATGCCTTA TERM 648 630332 - 630321 - g 71 -3 -5.28755 | overlap 630327 AAATACATTAAAAAA GAAA TATA TTTC TGAAAAATATGAGTT ptsI 629590 - 631323 + | phosphoenolpyruvate-protein phosphotransferase TERM 649 631516 - 631500 - T 81 -6.7 -4.76311 | TATAAATAAAAACAA TCTATTT CAT AAATAGA ATCAGGAGTAATATA cysA 632839 - 631772 - | sulfate/thiosulfate transporter subunit cysW 633721 - 632861 - | thiosulfate permease W TERM 650 633258 - 633244 - G 71 -2.9 -5.2204 | GACAAGTAACAAAAA TAGTA ACTAA TACTA ATCCTACCCATGTGA TERM 651 633669 - 633686 + g 88 -7.1 -5.08601 | CATTTAATACTACTG TTGCAAT CATT ATTGCAA TTTTTATTGACATAA cysU 634554 - 633721 - | sulfate/thiosulfate transporter subunit cysP 635576 - 634554 - | thiosulfate ABC transporter periplasmic substrate-binding protein TERM 652 635497 - 635476 - G 78 -8.9 -3.51235 | opp_overlap 635479, overlap 635479 635494 CTAGACACATCATAA GAACTATTT AATA AAATAGTTC CATGTATTGGAACAC TERM 653 636617 - 636585 - H 100 -16.7 -3.66896 | opp_overlap 636581 636595 TTGATAGATATACAA TATTTACATATCTCA CGT TGAGATATGTAAATA CAACTTATATAATAT TERM 654 637407 - 637397 - g 77 -4 -5.3472 | overlap 637392 AAAAAATAAATAAAA GTTA TTT TAAC CATAATAAATATTAC talA 636778 - 637629 + | transaldolase A tktA 637742 - 639739 + | transketolase TERM 655 639787 - 639820 + F 75 -9.1 -3.00786 | opp_overlap 639781 639789, overlap 639781 639789 639792 TAAAAAACATCTATA TACAACTATATCAAT AAAT ATCGGTATAGTTGTA TATCTGAATTTTACA dapE 639918 - 641072 + | succinyl-diaminopimelate desuccinylase BPEN_535 641543 - 641232 - | hypothetical protein dapA 642463 - 641564 - | dihydrodipicolinate synthase TERM 656 641728 - 641771 + g 100 -14 -3.25192 | opp_overlap 641735 641737, overlap 641734 641737 GTATAGGATTAGAAT CAATAAATAGCGCTTGGTGC ACAG GCATCAAGCGCTGATTAATG TGTTGTGCGGTTGAA TERM 657 641734 - 641765 + g 90 -11.6 -3.40191 | opp_overlap 641735 641737, overlap 641728 641737 GATTAGAATCAATAA ATAGCGCTTGGTGC ACAG GCATCAAGCGCTGA TTAATGTGTTGTGCG TERM 658 641764 - 641735 - G 95 -10.7 -4.37199 | opp_overlap 641734 641728 641737, overlap 641737 ATTAGAATCAATAAA TAGCGCTTGGTGC ACAG GCATCAAGCGCTG ATTAATGTGTTGTGC TERM 659 641762 - 641737 - G 100 -13.3 -3.78027 | opp_overlap 641734 641728 641737, overlap 641735 TAGAATCAATAAATA GCGCTTGGTGC ACAG GCATCAAGCGC TGATTAATGTGTTGT TERM 660 641737 - 641762 + g 100 -15.5 -2.85205 | opp_overlap 641737 641735, overlap 641734 641728 TAGAATCAATAAATA GCGCTTGGTGC ACAG GCATCAAGCGC TGATTAATGTGTTGT TERM 661 641860 - 641820 - G 72 -9.1 -2.63823 | AACTTACATAACTCA GCCATTTCCTTTGCAGCAA TAT TTGCTGTAACGGAAATTAC CCCAACTCCTCCAAG TERM 662 643188 - 643168 - g 70 -4.1 -5.06735 | overlap 643162 643169 643177 GATAAATCAGAAAAA CTTTTCAAA TTC TCTGAAAAA GAAATGTTAAACTTT TERM 663 643249 - 643224 - g 87 -8.5 -4.30844 | gap 1, opp_overlap 643232 ACTTTATGATGAAAA CTGCCAAATTTC CAA GAAATTTGG-AG TGTGGGGAGAAAAAA bcp 642934 - 643419 + | thioredoxin-dependent thiol peroxidase upp 644182 - 643556 - | uracil phosphoribosyltransferase TERM 664 644298 - 644242 - H 100 -26 -3.37487 | opp_overlap 644242 644246 644252 644255, overlap 644246 644252 644255 TTATACTTTCAAATA TCAATTTAAATAATATCCCATATTTA GATAA TAAATATGGGATATTATTTAAATTGA TATTTGAAGAATTTT TERM 665 644242 - 644298 + H 100 -26 -3.37685 | opp_overlap 644242 644246 644252 644255, overlap 644246 644252 644255 TTATACTTTCAAATA TCAATTTAAATAATATCCCATATTTA GATAA TAAATATGGGATATTATTTAAATTGA TATTTGAAGAATTTT TERM 666 644246 - 644294 + H 100 -21 -3.45571 | opp_overlap 644242 644246 644252 644255, overlap 644242 644252 644255 ACTTTCAAATATCAA TTTAAATAATATCCCATATTTA GATAA TAAATATGGGATATTATTTAAA TTGATATTTGAAGAA TERM 667 644294 - 644246 - H 100 -21 -3.45839 | opp_overlap 644246 644242 644252 644255, overlap 644242 644252 644255 ACTTTCAAATATCAA TTTAAATAATATCCCATATTTA GATAA TAAATATGGGATATTATTTAAA TTGATATTTGAAGAA TERM 668 644252 - 644288 + H 100 -15.6 -3.81461 | opp_overlap 644246 644242 644252 644255, overlap 644246 644242 644255 AAATATCAATTTAAA TAATATCCCATATTTA GATAA TAAATATGGGATATTA TTTAAATTGATATTT TERM 669 644288 - 644252 - H 100 -15.6 -3.81461 | opp_overlap 644252 644246 644242 644255, overlap 644246 644242 644255 AAATATCAATTTAAA TAATATCCCATATTTA GATAA TAAATATGGGATATTA TTTAAATTGATATTT TERM 670 644255 - 644285 + H 100 -12.9 -4.02051 | opp_overlap 644252 644246 644242 644255, overlap 644252 644246 644242 TATCAATTTAAATAA TATCCCATATTTA GATAA TAAATATGGGATA TTATTTAAATTGATA TERM 671 644285 - 644255 - H 100 -12.9 -4.02051 | opp_overlap 644255 644252 644246 644242, overlap 644252 644246 644242 TATCAATTTAAATAA TATCCCATATTTA GATAA TAAATATGGGATA TTATTTAAATTGATA TERM 672 644806 - 644795 - H 74 -3 -5.7946 | opp_overlap 644774, overlap 644805 TTTTGAATAAAAAAA CATT TTAC AATG AAAATGCATTTCATA BPEN_539 644913 - 645113 + | hypothetical protein ureG 646035 - 645412 - | putative urease accessory protein G ureF 646802 - 646116 - | putative urease accessory protein F TERM 673 646474 - 646495 + g 82 -10.2 -3.2178 | overlap 646472 TGCAATATTATTCTC GACAACGC TTTCCC GCGTTGTC TCTCTTCTAATCTAA TERM 674 646838 - 646820 - R 74 -6.2 -4.37544 | overlap 646814 TTATAATAATATAAA TAATATTT ATA AAATATTA ACATAAATATCATTG ureC 648976 - 647273 - | urease subunit alpha ureB 649287 - 648979 - | urease subunit beta TERM 675 649272 - 649246 - G 83 -10.4 -3.1855 | TCTTCCAACATTCAA TTCTATATTTCC ATG AGAAATATAGAA TTCACCTGGTATCAT ureA 649617 - 649315 - | urease subunit gamma ureD 650467 - 649631 - | putative urease accessory protein D TERM 676 650791 - 650753 - R 95 -13.4 -2.78422 | opp_overlap 650753 650758, overlap 650758 ATACACATTTAATGA GTAAAGTATGTACTTCCA TAG TGGGAGTACATACTTTAA ATTGTATGTCACATA TERM 677 650753 - 650791 + r 100 -15.6 -2.75498 | opp_overlap 650753 650758, overlap 650758 ATACACATTTAATGA GTAAAGTATGTACTTCCA TAG TGGGAGTACATACTTTAA ATTGTATGTCACATA TERM 678 650758 - 650786 + r 100 -15.5 -3.84394 | opp_overlap 650753 650758, overlap 650753 CATTTAATGAGTAAA GTATGTACTTCCA TAG TGGGAGTACATAC TTTAAATTGTATGTC TERM 679 650786 - 650758 - R 100 -13.3 -3.84961 | opp_overlap 650758 650753, overlap 650753 CATTTAATGAGTAAA GTATGTACTTCCA TAG TGGGAGTACATAC TTTAAATTGTATGTC guaA 652434 - 650857 - | bifunctional GMP synthase/glutamine amidotransferase protein guaB 654047 - 652578 - | inosine-5'-monophosphate dehydrogenase TERM 680 653047 - 653023 - G 70 -4.2 -4.93898 | overlap 653027 ATATCACCAGAAAAA CGAATACCGC CATCC GCGATAACCG GGACATTCGTATTTT TERM 681 654035 - 654019 - G 72 -5.9 -4.34947 | AACACATCATCAAAA GTCAAAG CCT CTTTAAC AAAAGTCAACATTAC TERM 682 655089 - 655069 - g 71 -5.5 -4.63486 | opp_overlap 655069, overlap 655088 ATGGGGCGAAGAAAA CGTTTGTTT TTT AAAAAAACG CTTTCAAGCATTGCT TERM 683 655099 - 655088 - g 71 -2.2 -5.40072 | opp_overlap 655069 655092, overlap 655069 TGTTTTTTAAAAAAA CGCT TTCA AGCA TTGCTGAATAGTGTT TERM 684 655405 - 655394 - g 74 -3 -5.37345 | TGTAAGCACAAAAAA TGTA TTCG TACA AATTATGTTTTTATA TERM 685 655472 - 655455 - g 84 -9.9 -3.54459 | opp_overlap 655455 TTAATCTTTTGCAAA CTTCTGG AATT CCAGAAG TTTATGGATATGCTG TERM 686 655455 - 655472 + G 87 -9.9 -3.95787 | opp_overlap 655455 TTAATCTTTTGCAAA CTTCTGG AATT CCAGAAG TTTATGGATATGCTG mqo 654656 - 656203 + | malate:quinone oxidoreductase engA 657711 - 656296 - | GTP-binding protein EngA TERM 687 657457 - 657473 + g 74 -7.3 -4.02571 | TAATAAAATGTCAGC TTCTTGC ATT GCGAGAA TTGTTTGATAGGTTA hisS 659348 - 658032 - | histidyl-tRNA synthetase TERM 688 658210 - 658220 + g 86 -4 -5.74122 | overlap 658200 TTATGTTTATTAGCA CAAT AAA ATTG TTTTTTTATATCATC ispG 660492 - 659362 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase yfgB 661834 - 660713 - | putative pyruvate formate lyase activating enzyme 2 TERM 689 661324 - 661340 + g 91 -4.5 -6.01725 | opp_overlap 661313 661318 TAAACACTATATTAG TAATAGG AAA TCTATTA TTTTTTATTTTTATT TERM 690 661872 - 661860 - R 70 -7.7 -3.39449 | opp_overlap 661860 GTTGATCAACAGTAA TGCTC TAT GAGCA TTCGCTCAATAGAAA ndk 662450 - 662040 - | 3'-phosphodiesterase TERM 691 662266 - 662286 + g 72 -8.5 -3.04144 | opp_overlap 662277 AAATTTACTAAACTG TCAAAAAAA TAT TTTTTTTGA TGTTCAAAATAAAAC TERM 692 662624 - 662651 + r 70 -5.2 -4.91459 | gap 1 AAGTAGAAATATCCA TATTTGTATTTCA TTA TGAAATA-AAATA TTTTTGTCGATCTTA nifS 664158 - 662989 - | putative L-cysteine desulfurase TERM 693 663616 - 663651 + g 86 -11.4 -2.91888 | gap 1, opp_overlap 663631 663633, overlap 663633 ACCAACGCTTTGAGT TG-CGTCTACATGAAAT ATT ATGTCATGTAGACGACA TAATTTACCAAATTT suhB 665003 - 665797 + | putative myo-inositol-1(or 4)-monophosphatase glyA 667143 - 665893 - | serine hydroxymethyltransferase TERM 694 667331 - 667315 - R 72 -8.1 -3.41416 | TTAAAAGAATTAACA CTTACTT TTT AAGTAAG ATATGCCCTATATCT tadA 667910 - 667443 - | tRNA-specific adenosine deaminase TERM 695 667577 - 667587 + g 71 -5.4 -4.56597 | GCCATGATCTTTGTT CAGT TTT ACTG TTTTTAGCGCCACAA acpS 668430 - 668053 - | holo-[acyl-carrier-protein] synthase pdxJ 669167 - 668433 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 696 669691 - 669720 + r 86 -9.5 -4.20783 | opp_overlap 669691 669695, overlap 669695 669716 TGTGCTTTAAAATAA TAAACATACCCTT TAAC AAAGGTATGTTTA TTTATTGAATAAACT TERM 697 669720 - 669691 - R 100 -11.7 -4.17048 | opp_overlap 669691 669695 669716, overlap 669695 TGTGCTTTAAAATAA TAAACATACCCTT TAAC AAAGGTATGTTTA TTTATTGAATAAACT TERM 698 669695 - 669716 + r 75 -5.9 -4.69214 | opp_overlap 669691 669695, overlap 669691 CTTTAAAATAATAAA CATACCCTT TAAC AAAGGTATG TTTATTTATTGAATA TERM 699 669716 - 669695 - R 82 -8.1 -4.67697 | opp_overlap 669695 669691, overlap 669691 CTTTAAAATAATAAA CATACCCTT TAAC AAAGGTATG TTTATTTATTGAATA TERM 700 669801 - 669789 - R 73 -9.1 -2.61484 | opp_overlap 669787 669796 ATATTAAGCAATTTA CGGTC TAT GACCG CGTCATTAAATCATA rnc 670501 - 669812 - | RNase III TERM 701 670545 - 670583 + r 72 -8.5 -2.80291 | opp_overlap 670545 670570 TGTTCATGGAGAAAA TTTTTTGTAATCAATTT TAACC AGATTGATTACAACAAA TGTAATAAAATAATT TERM 702 670583 - 670545 - R 74 -6.3 -4.42386 | opp_overlap 670545, overlap 670570 TGTTCATGGAGAAAA TTTTTTGTAATCAATTT TAACC AGATTGATTACAACAAA TGTAATAAAATAATT TERM 703 670658 - 670641 - R 71 -8.5 -2.63596 | TCTTATTGTATATTA CCAATTC TATG GAATTGG ATACTAATTGGCCAT lepB 671623 - 670628 - | signal peptidase I TERM 704 670841 - 670857 + g 80 -5.2 -5.17507 | AGATATTAAGTGTTT TGTATG TTGAT CATACA TTTTTATTAAGTTTT lepA 673444 - 671642 - | GTP-binding protein LepA TERM 705 673264 - 673276 + g 74 -6.3 -4.4891 | ACTTATAATTGAGTG TCACA TTT TGTGA TTTTATAGTAATACC ung 673829 - 674521 + | uracil-DNA glycosylase TERM 706 674590 - 674631 + T 85 -10.5 -3.35869 | opp_overlap 674594 674625 674628, overlap 674584 674591 674594 674625 674628 TATCTTGTACTCTTG AATATCATTGTTGATTTAT TGTG ATAAATCAACAATGATAAA TTAATAATTTATAAT TERM 707 674591 - 674630 + T 100 -14 -2.60798 | opp_overlap 674594 674625 674628, overlap 674590 674584 674594 674625 674628 ATCTTGTACTCTTGA ATATCATTGTTGATTTAT TGTG ATAAATCAACAATGATAA ATTAATAATTTATAA TERM 708 674594 - 674627 + T 100 -15.7 -2.59482 | opp_overlap 674594 674625, overlap 674591 674590 674584 674625 TTGTACTCTTGAATA TCATTGTTGATTTAT TGTG ATAAATCAACAATGA TAAATTAATAATTTA TERM 709 674627 - 674594 - T 100 -15.7 -3.03124 | opp_overlap 674594 674591 674590 674584 674625, overlap 674625 TTGTACTCTTGAATA TCATTGTTGATTTAT TGTG ATAAATCAACAATGA TAAATTAATAATTTA TERM 710 674707 - 674676 - T 78 -7.6 -4.23213 | opp_overlap 674681, overlap 674672 TGTATATTTAATAAA TTCAATTATTGAAT TAAA ATTTAATAATTGAA TAAACAATAATTATA grpE 675462 - 674875 - | heat shock protein 24 TERM 711 675205 - 675218 + g 75 -2.4 -5.61913 | GATAAATCGTTCTAA TCCA AATTTA TGGA TTTTTTCTATTTCTT TERM 712 675291 - 675275 - G 70 -8.1 -3.04263 | opp_overlap 675275 ATTTCAGCTGTAAGA CGTAATA CCG TATTACG TTCATGTTCTTGAAG TERM 713 675275 - 675291 + g 73 -8.1 -3.46509 | opp_overlap 675275 ATTTCAGCTGTAAGA CGTAATA CCG TATTACG TTCATGTTCTTGAAG yfjB 675593 - 676486 + | inorganic polyphosphate/ATP-NAD kinase TERM 714 676648 - 676607 - g 71 -6.7 -4.10429 | opp_overlap 676607 AAGTATTTTTTAAAA CCTTACATACCAGTATTTT TATT ATAACGCTGGTATGTAACG TAAGTTGTACTATGC TERM 715 676761 - 676794 + G 71 -5.3 -4.56597 | opp_overlap 676754 676753 676762 676763 676792, overlap 676762 676763 GACAAAACTAGAAAT ATCTTCTAATATCGG AGAT CCGACGTTAGAAGGG TTTTTAAACCCAAAC TERM 716 676762 - 676793 + G 74 -8.8 -3.33744 | opp_overlap 676754 676753 676762 676763 676792, overlap 676761 676763 ACAAAACTAGAAATA TCTTCTAATATCGG AGAT CCGACGTTAGAAGG GTTTTTAAACCCAAA TERM 717 676763 - 676792 + G 77 -10.1 -2.60032 | opp_overlap 676754 676753 676762 676763, overlap 676762 676761 CAAAACTAGAAATAT CTTCTAATATCGG AGAT CCGACGTTAGAAG GGTTTTTAAACCCAA TERM 718 676792 - 676763 - g 79 -10.1 -2.80614 | opp_overlap 676763 676762 676761, overlap 676754 676753 676762 CAAAACTAGAAATAT CTTCTAATATCGG AGAT CCGACGTTAGAAG GGTTTTTAAACCCAA TERM 719 676850 - 676894 + G 100 -13.4 -4.29738 | gap 1, opp_overlap 676850 676855 676857 676865, overlap 676854 GTAGAGGTAATAGAA TATTA-GAGCATCAAATTTTA ACAT TAAAATTTGATGCTCATGATA TTTTGGTAACTATAA TERM 720 676894 - 676850 - g 89 -11.2 -3.70446 | gap 1, opp_overlap 676850 676854, overlap 676855 676857 676865 GTAGAGGTAATAGAA TATTA-GAGCATCAAATTTTA ACAT TAAAATTTGATGCTCATGATA TTTTGGTAACTATAA TERM 721 676854 - 676889 + G 100 -13.6 -2.96321 | opp_overlap 676850 676855 676857 676865, overlap 676850 AGGTAATAGAATATT AGAGCATCAAATTTTA ACAT TAAAATTTGATGCTCA TGATATTTTGGTAAC TERM 722 676888 - 676855 - g 100 -17.1 -2.85947 | opp_overlap 676854 676850, overlap 676850 676857 676865 GGTAATAGAATATTA GAGCATCAAATTTTA ACAT TAAAATTTGATGCTC ATGATATTTTGGTAA TERM 723 676886 - 676857 - g 100 -13.9 -2.97255 | opp_overlap 676854 676850, overlap 676855 676850 676865 TAATAGAATATTAGA GCATCAAATTTTA ACAT TAAAATTTGATGC TCATGATATTTTGGT smpA 676582 - 676920 + | small membrane protein A yfjG 677435 - 676950 - | hypothetical protein TERM 724 677109 - 677093 - G 71 -8.1 -3.25494 | overlap 677086 GAGAAGAATATTCAA TTCTACT GAC AGTAGAA GTAATAGGAATAAAT TERM 725 677619 - 677639 + G 77 -9.9 -2.7648 | opp_overlap 677617, overlap 677618 677615 GCTCGTTCTAATATG GTAACTATT AAT AATAGTTAC GTATCTTTTTATAAT smpB 677490 - 677954 + | SsrA-binding protein TERM 726 678582 - 678618 + F 100 -15.6 -4.93877 | TTTATTTCTCGTTTG TTCTTTCATGAAAAAA ATAAA TTTTTTCATGAAAGAA TTTTATTTAATACAA TERM 727 678858 - 678841 - g 76 -8.5 -3.54424 | opp_overlap 678840 678844, overlap 678844 CTTTAGTGTTGCAAA CAATACC GATG GGTATTG CATATTCCTGTTGGG emrE 678687 - 679016 + | auxillary SMR family multidrug transporter TERM 728 680795 - 680760 - g 76 -6.2 -4.65305 | opp_overlap 680759 680770, overlap 680765 CAAAAAAATAAAGAA CTAAACATGATTCGTA TGCA TACGAATCATGTAACG CATTATACATCATTG TERM 729 680790 - 680765 - g 100 -13.5 -4.2181 | opp_overlap 680759 680770, overlap 680760 AAATAAAGAACTAAA CATGATTCGTA TGCA TACGAATCATG TAACGCATTATACAT pssA 679527 - 680903 + | phosphatidylserine synthase TERM 730 682616 - 682632 + F 84 -9.4 -4.10934 | TTAGTTTTTCGGCGA GCGGGT TTTTC ACCCGC TTTATCGTTACTTAT TERM 731 683467 - 683479 + F 71 -6.2 -4.2354 | AGGTTCTATTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 732 684518 - 684501 - f 75 -9.1 -3.07291 | opp_overlap 684501 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 733 687521 - 687510 - g 78 -2.2 -5.71712 | CTTTAGATAAAAAAA CAGC TCAA GCTA TTATTAGTCAACAAT purH 686483 - 688117 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase rpoC 692902 - 688652 - | DNA-directed RNA polymerase subunit beta' TERM 734 688738 - 688749 + g 77 -4.4 -5.20735 | overlap 688722 AAATATTTGTTATTA CAGA TTTT TCTG TTTCTTTTTTATTAC TERM 735 689086 - 689073 - G 71 -3.1 -5.1675 | TCACCTACTAAAAAA TCAGA ACTG CCTGA TCGAATCACAGTGGC TERM 736 691763 - 691785 + g 78 -2 -5.88471 | opp_overlap 691763 TTTTCCATAAATAAA TGGCTTAA ATAATTC TAAAGCCA TTTTTTTTGGTAATC rpoB 697016 - 692991 - | DNA-directed RNA polymerase subunit beta TERM 737 693608 - 693630 + g 100 -12.2 -4.83243 | TTAATTGATTTGCTT CTTTATGTTG TTG CAACATAAAG TTTATTTTATCTCCG TERM 738 695003 - 694979 - G 88 -11.5 -3.28712 | TGTTTGCGCCCATAA GAGCACGATTA GCA TCATCGTGCTC AAGAAAAGGGATTAA TERM 739 695092 - 695069 - G 71 -7.6 -3.3782 | gap 1, opp_overlap 695057 695065 695064, overlap 695070 CATCCATGTAATCAA CTTGGTCTTTT TTA AAAAGACC-AG ATTCACCTTTATTTC TERM 740 695218 - 695202 - G 73 -8.1 -3.52192 | TTCAATTGCAGATAA GTAATGA ATG TCATTAC TAACAACGCCATTTT TERM 741 695244 - 695268 + g 77 -8.7 -3.67597 | ATTTTGGACTTTTCG GTATGGAGTTT CTA AAAATCCATAC TTATTAGCTCGAGCA rplL 697640 - 697272 - | 50S ribosomal protein L7/L12 rplJ 698225 - 697734 - | 50S ribosomal protein L10 TERM 742 698007 - 698035 + g 80 -8.9 -3.68366 | overlap 698014 TCCTGTTAAAATTTC TCGTAAACACGCT AAA GGTGTGTTTTCGA TTACTTTTCGCATGA TERM 743 698404 - 698438 + r 73 -6.7 -4.24149 | gap 1, opp_overlap 698394 698407 698410, overlap 698411 698412 TAAATTTGTTATAGT TAACAACTGCATTCAT GTGT ATGAATGC-GTTATTA TTGTTATTTTACTCA TERM 744 698411 - 698432 + r 79 -8.1 -4.17009 | opp_overlap 698410 698407, overlap 698404 698412 GTTATAGTTAACAAC TGCATTCAT GTGT ATGAATGCG TTATTATTGTTATTT TERM 745 698412 - 698431 + r 77 -9.4 -3.07765 | opp_overlap 698410 698407, overlap 698411 698404 TTATAGTTAACAACT GCATTCAT GTGT ATGAATGC GTTATTATTGTTATT rplA 699281 - 698574 - | 50S ribosomal subunit protein L1 rplK 699718 - 699287 - | 50S ribosomal subunit protein L11 TERM 746 699872 - 699850 - R 71 -7.9 -3.27994 | opp_overlap 699850 699847 TTAATTTTACATTAA GATTTTTCA ACTTG TGAAAAATC TAATTCTACCGGAGT nusG 700391 - 699846 - | transcription antitermination protein secE 700740 - 700393 - | preprotein translocase subunit SecE tuf 701994 - 700810 - | elongation factor Tu fusA 704170 - 702056 - | elongation factor G TERM 747 703551 - 703522 - G 76 -8.7 -3.53343 | opp_overlap 703522 AATGCTTGCGCCAAA TACCTGACAAATC TGTT AAATTGTCAGGTA TTTCACTATAACTAA TERM 748 703522 - 703551 + g 75 -8 -3.71873 | opp_overlap 703522 AATGCTTGCGCCAAA TACCTGACAAAT CTGTTA AATTGTCAGGTA TTTCACTATAACTAA rpsG 704764 - 704294 - | 30S ribosomal protein S7 TERM 749 704622 - 704656 + g 75 -5.1 -5.12707 | gap 1, opp_overlap 704622 704627 CGTCTGAATAAACTA TCTAAGGCAGAGTACA CTAT TG-ACTCTGCAGTAGA TTTTTTCCCATTTAA TERM 750 704725 - 704703 - G 80 -9.2 -3.64488 | overlap 704701 704704 704706 704708 AACTTTGCCAAAAGA TCAGATCCAA ATC TTGGATCTGG AAGAATATTGCGTTT TERM 751 704724 - 704704 - G 95 -12.7 -2.78211 | overlap 704703 704701 704706 704708 ACTTTGCCAAAAGAT CAGATCCAA ATC TTGGATCTG GAAGAATATTGCGTT TERM 752 704722 - 704706 - G 75 -9.5 -2.93623 | overlap 704704 704703 704701 704708 TTTGCCAAAAGATCA GATCCAA ATC TTGGATC TGGAAGAATATTGCG TERM 753 704726 - 704708 - G 70 -8.2 -3.01785 | overlap 704706 704704 704703 704701 TGCCAAAAGATCAGA TCCAAATC TTG GATCTGGA AGAATATTGCGTTTC rpsL 705290 - 704916 - | 30S ribosomal protein S12 TERM 754 705731 - 705750 + r 70 -5.2 -4.77759 | ATACAACAATTATTA TTTATTAT AGCA ATAATAAA TTTTTAATAAATTAT TERM 755 705863 - 705823 - R 89 -11.6 -3.50447 | opp_overlap 705828, overlap 705828 CTAATTTTTAGACAA TATAATTGAAATGCAT AAAATCAAA ATGCATTTCAATTATA AAACTCGAAAACCTT TERM 756 705858 - 705828 - R 71 -7.1 -3.79874 | opp_overlap 705828, overlap 705823 TTTTAGACAATATAA TTGAAATGCAT AAAATCAAA ATGCATTTCAA TTATAAAACTCGAAA TERM 757 706286 - 706300 + r 71 -5.8 -4.67635 | opp_overlap 706286 706285 706288 ACATATGAATAAATG CATATA ATT TATATG TTTTATAATTTTGAA TERM 758 706360 - 706335 - R 71 -7.1 -3.9318 | overlap 706333 706337 AAATTTTTAAAAATA CACATTAATAA AAAA TTATTAATGTA AGGTATTGTTATACG TERM 759 706358 - 706337 - R 70 -7.5 -3.54256 | overlap 706335 706333 ATTTTTAAAAATACA CATTAATAA AAAA TTATTAATG TAAGGTATTGTTATA pabA 707650 - 707069 - | aminodeoxychorismate synthase subunit II TERM 760 707193 - 707217 + g 100 -13 -3.88291 | ATTTCGGTATATTTA TCACTGCATG TGCTC CATGCAGTGA TTTCTAAACATGATG trpS 709031 - 708033 - | tryptophanyl-tRNA synthetase TERM 761 708422 - 708436 + g 71 -8.6 -2.81191 | opp_overlap 708421, overlap 708421 708424 GAGTAATCATATTAC CAGATC TAC GATCTG ATTTAGACATTTTTT rpe 709933 - 709268 - | ribulose-phosphate 3-epimerase TERM 762 709447 - 709461 + g 70 -4.3 -4.88918 | TATTGTCTATTAATT TACGT GTTTG ACGTA TTTTATTTAAAATCA TERM 763 709857 - 709840 - G 88 -8.5 -4.44277 | CATCAAAATGTAAAA TATCTGC GCCA GCAGATA CAACATTAGTAACAT aroB 711420 - 710332 - | 3-dehydroquinate synthase aroK 712038 - 711475 - | shikimate kinase I TERM 764 712250 - 712273 + H 70 -6.9 -3.57792 | opp_overlap 712250 712246 CAACTTAGAAACTTA TTTATTCTC ATAGTG GAGAATAAA TTTGACAATGAATAA gntY 713530 - 714120 + | membrane-bound protein in GNT I transport system asd 715384 - 714278 - | aspartate-semialdehyde dehydrogenase TERM 765 714877 - 714859 - G 70 -8 -3.14051 | overlap 714857 CCATTTGTATTAATA GCTCACGC ATG GCGCGTGC TCCACATCCAGAAGC TERM 766 715808 - 715779 - g 72 -5.1 -4.8543 | opp_overlap 715778, overlap 715782 TAATTGCCATAAAAA TGATATTTCCTTC AGAA GAAGGAAATAATA CTGGATTTTCAGATG TERM 767 715805 - 715782 - g 85 -11.2 -3.31915 | opp_overlap 715778, overlap 715779 TTGCCATAAAAATGA TATTTCCTTC AGAA GAAGGAAATA ATACTGGATTTTCAG yhgN 715520 - 716113 + | dITP- and XTP- hydrolyzing protein TERM 768 716555 - 716530 - T 79 -5 -5.4148 | opp_overlap 716541 716542 716545, overlap 716542 716545 TAAATAATGAAAAAA TATTAAAAAT CATAAT ATTTTTAATA AAAATATTAATTTAA TERM 769 716564 - 716542 - T 71 -8 -3.33169 | opp_overlap 716542 716541 716545, overlap 716530 716545 AAATATTAAAAATCA TAATATTTTT AAT AAAAATATTA ATTTAAAACACCATT yigL 717401 - 716562 - | putative sugar phosphatase corA 718711 - 717767 - | Mg2+/Co2+ transporter yigB 721895 - 721179 - | HAD family hydrolase dapF 722893 - 722069 - | diaminopimelate epimerase TERM 770 722210 - 722248 + g 100 -13.9 -3.34455 | gap 1, overlap 722204 TAATCCCTGTTGAAT GCCTACGGCAACTGCCGC ACAG GCGGCAGTT-CCGCAAGC TTGAGTTTCTCCTAC TERM 771 723070 - 723080 + H 74 -5.4 -4.85782 | opp_overlap 723070 ATATTATAGAAACAA GAAC ATA GTTC TTTCTTTTTAGAAAA hemC 723951 - 724853 + | porphobilinogen deaminase TERM 772 725043 - 725060 + G 72 -2.7 -5.3236 | opp_overlap 725043 GGAACAGAAATTAAA TCTACTT TCTG AAGGAGA TTTTTTGTGCATTAT TERM 773 725344 - 725330 - g 71 -8.6 -2.85999 | opp_overlap 725330 CTATTTTAGATGACA CTCTTC AAA GAAGAG GAGTATTTGTTGCAT TERM 774 725548 - 725570 + G 100 -15 -3.75153 | ATCGTGGTAAGTGTA CGTCTAGCTA AAT TAGCTAGACG TTTAGGTTGGACAAA hemD 724900 - 725649 + | uroporphyrinogen-III synthase TERM 775 725684 - 725703 + T 70 -8 -3.05597 | opp_overlap 725681 725684, overlap 725683 AAATGCGAACAATCA TTTCTATG AACA CATAGAAA ATTTTAGAAAATGCA TERM 776 726007 - 725987 - T 75 -9.1 -3.13522 | opp_overlap 725986, overlap 725985 ACGTCTTGATCAAGA CACTAACTC CTG AAGTTAGTG CGTCTTCCTATTCCG TERM 777 726774 - 726753 - T 70 -5.2 -4.7657 | TAAAAACCTTAAAAA TTGCCGTT ATAGAA AACGACAA ATAGTCTTTTTTAAA rho 728088 - 726829 - | transcription termination factor Rho TERM 778 728359 - 728388 + r 100 -11.7 -4.35348 | gap 1, overlap 728360 AAATTGCATTACCTG T-TATTGCCGCTAT TAT ATAGCGGCAATATA TTTATATTCTATTAT TERM 779 728360 - 728386 + r 100 -16.8 -3.75997 | overlap 728359 AATTGCATTACCTGT TATTGCCGCTAT TAT ATAGCGGCAATA TATTTATATTCTATT trxA 728856 - 728530 - | thioredoxin 1, redox factor ilvC 730567 - 729092 - | ketol-acid reductoisomerase TERM 780 729136 - 729148 + g 72 -3.4 -5.1764 | GCATATAACTTCTTA GTTG AATTC CAAC TTTTTCTATTGTGTG ilvA 732172 - 730628 - | threonine dehydratase ilvD 734031 - 732181 - | dihydroxy-acid dehydratase ilvE 735024 - 734104 - | branched-chain amino acid aminotransferase TERM 781 734673 - 734660 - G 73 -4.5 -5.10461 | overlap 734646 GGCAGCCAAGAAAAA GCTGC TATA GCAAC GTCAGTAGCGTATCC ilvM 735321 - 735085 - | acetolactate synthase 2 regulatory subunit TERM 782 735172 - 735182 + g 82 -2.6 -5.95946 | opp_overlap 735172 GCTAGAAACAGTTAA TAAA ATG TTTA TTTTTTTCTTGTTGA ilvG 736963 - 735323 - | acetolactate synthase 2 catalytic subunit TERM 783 738005 - 738062 + r 100 -15.4 -2.85909 | gap 1, opp_overlap 738011 738020 738022 738024 738054, overlap 738007 738020 738022 738024 TAACGTAAATACACG AGTAGATTTAGTTAATATACGTCGCAT AAATA ATGCGACGTATATTAACTAAATA-ACA TACTTATCCAGTTTT TERM 784 738057 - 738011 - R 100 -24.3 -2.86722 | opp_overlap 738005 738007 738020 738022 738024, overlap 738020 738022 738024 738054 AAATACACGAGTAGA TTTAGTTAATATACGTCGCAT AAATA ATGCGACGTATATTAACTAAA TAACATACTTATCCA TERM 785 738048 - 738020 - R 100 -14.8 -3.09193 | opp_overlap 738020 738005 738007 738022 738024, overlap 738011 738022 738024 AGTAGATTTAGTTAA TATACGTCGCAT AAATA ATGCGACGTATA TTAACTAAATAACAT TERM 786 738020 - 738048 + r 100 -14.8 -3.07935 | opp_overlap 738011 738020 738022 738024, overlap 738005 738007 738022 738024 AGTAGATTTAGTTAA TATACGTCGCAT AAATA ATGCGACGTATA TTAACTAAATAACAT TERM 787 738022 - 738046 + r 93 -13 -3.09878 | opp_overlap 738020 738011 738022 738024, overlap 738020 738005 738007 738024 TAGATTTAGTTAATA TACGTCGCAT AAATA ATGCGACGTA TATTAACTAAATAAC TERM 788 738046 - 738022 - R 93 -13 -3.10354 | opp_overlap 738022 738020 738005 738007 738024, overlap 738020 738011 738024 TAGATTTAGTTAATA TACGTCGCAT AAATA ATGCGACGTA TATTAACTAAATAAC TERM 789 738024 - 738044 + r 84 -11.2 -3.1082 | opp_overlap 738022 738020 738011 738024, overlap 738022 738020 738005 738007 GATTTAGTTAATATA CGTCGCAT AAATA ATGCGACG TATATTAACTAAATA TERM 790 738044 - 738024 - R 84 -11.2 -3.1082 | opp_overlap 738024 738022 738020 738005 738007, overlap 738022 738020 738011 GATTTAGTTAATATA CGTCGCAT AAATA ATGCGACG TATATTAACTAAATA TERM 791 738139 - 738124 - R 83 -3.4 -6.28401 | overlap 738132 TAAAAAATAAAAAAA TATAAA CATT TTTATA TCAAAAAACAATCTG murI 739872 - 739039 - | glutamate racemase TERM 792 740125 - 740145 + r 74 -8.5 -3.28122 | opp_overlap 740106 740122 740120 740117, overlap 740120 740123 TATAGAATACTATTC TATACATAT AGA ATATGTATA TATATTTGACTGATA metF 741207 - 740314 - | 5,10-methylenetetrahydrofolate reductase metB 742767 - 741619 - | cystathionine gamma-synthase TERM 793 742546 - 742530 - G 80 -7.3 -4.56113 | opp_overlap 742530 742532 AACATATTAAATAAA TAGCAGA CAT TCCGCTA CTTGTCATAATCGCA TERM 794 743035 - 743054 + r 71 -3.7 -5.43974 | ACATAACGTCCTTAC GTAAATA ATTCTA TATTTAC TTTTTATTTAATTTT rpmE 743299 - 743051 - | 50S ribosomal protein L31 TERM 795 743379 - 743365 - H 73 -4.4 -5.22006 | opp_overlap 743365, overlap 743370 TTATCATAATAAAAA TAAATT ATA AATTTA TTTTATAGCGCTTAA TERM 796 744432 - 744405 - H 93 -7.2 -5.3671 | opp_overlap 744407 744410, overlap 744408 AATATAATCAAAAAA TATTACTACTAT ATAA ATAGTAGTACTA TAATAGTCACTCTAT TERM 797 744429 - 744408 - H 75 -8.9 -3.15885 | opp_overlap 744407 744410, overlap 744405 ATAATCAAAAAATAT TACTACTAT ATAA ATAGTAGTA CTATAATAGTCACTC TERM 798 745050 - 745039 - g 83 -5.8 -5.14965 | opp_overlap 745039 ATGCTTACTAAAAAA GCGT ACGG ACGC TTTATACTCAATGAA fpr 744760 - 745509 + | ferredoxin-NADP reductase TERM 799 746093 - 746077 - g 76 -5.3 -5.04385 | opp_overlap 746070 TATATTGCTAAAAAA TTTTTTA TAT TAAAAAA AGTTGGATTAATTCC tpiA 745741 - 746517 + | triosephosphate isomerase pfkA 747652 - 746684 - | 6-phosphofructokinase TERM 800 747736 - 747724 - R 71 -3.5 -5.40014 | overlap 747729 AAATAATAATAAAAA TATAA TTA TTATA TAAATATACAAAAAT TERM 801 747764 - 747796 + r 77 -7.9 -4.03474 | opp_overlap 747768 747770, overlap 747758 747767 AATAAAAGGCTGTAT CAAATACACATATAA CAG TTATATGTGAAATTG TTATTAGTTTTTAAT TERM 802 747792 - 747768 - R 70 -7.3 -3.73968 | opp_overlap 747767 747764 747758, overlap 747770 AAAGGCTGTATCAAA TACACATATAA CAG TTATATGTGAA ATTGTTATTAGTTTT TERM 803 747790 - 747770 - R 82 -9.9 -3.45027 | opp_overlap 747767 747764 747758, overlap 747768 AGGCTGTATCAAATA CACATATAA CAG TTATATGTG AAATTGTTATTAGTT TERM 804 747811 - 747849 + r 100 -16.6 -3.5518 | opp_overlap 747815 GTTATTAGTTTTTAA TTTATTAGTATTTTTAAT TTA ATTAAAAATACTAATAAA TTCTCTAAATATTGA TERM 805 747845 - 747815 - R 93 -13 -2.52896 | opp_overlap 747811 TTAGTTTTTAATTTA TTAGTATTTTTAAT TTA ATTAAAAATACTAA TAAATTCTCTAAATA TERM 806 748200 - 748167 - R 81 -9.9 -3.36952 | gap 1, opp_overlap 748167 748166 748175, overlap 748170 748173 AAAATTACATACTAA GCATAATATACCTATA TTG TACAGGTATATTA-GC AATTTTGTAATCAAA TERM 807 748198 - 748170 - R 84 -11.3 -2.83613 | opp_overlap 748167 748166 748175, overlap 748167 748173 ATTACATACTAAGCA TAATATACCTATA TTG TACAGGTATATTA GCAATTTTGTAATCA TERM 808 748195 - 748173 - R 75 -8.6 -3.55889 | opp_overlap 748167 748166 748175, overlap 748170 748167 ACATACTAAGCATAA TATACCTATA TTG TACAGGTATA TTAGCAATTTTGTAA cysE 749121 - 748372 - | serine acetyltransferase gpsA 750206 - 749172 - | glycerol-3-phosphate dehydrogenase secB 750701 - 750237 - | molecular chaperone in protein export TERM 809 750612 - 750600 - G 73 -7.7 -3.6215 | CCAATTTATTTGAAA CACTC CAG GAGTG TTCGGAGCTTCAAAT grxC 751017 - 750742 - | glutaredoxin 3 yibN 751479 - 751030 - | putative rhodanese-related sulfurtransferase TERM 810 751413 - 751379 - G 77 -8.8 -3.62723 | overlap 751372 751382 GACCCAAACAACCAA CTATTAATTGTAGTGT ACA ACACTGCAATTAACAA AAGTACCCATATAAT TERM 811 751410 - 751382 - G 81 -10.5 -2.92158 | overlap 751372 751379 CCAAACAACCAACTA TTAATTGTAGTGT ACA ACACTGCAATTAA CAAAAGTACCCATAT TERM 812 751419 - 751445 + g 74 -9.6 -2.59668 | opp_overlap 751417 751416 751419 751420, overlap 751419 CAATTAACAAAAGTA CCCATATAATAC TGA GTATTATATGGC GTTGTAAAAATATTG TERM 813 751445 - 751419 - G 78 -9.6 -3.29332 | opp_overlap 751419 751419, overlap 751417 751416 751420 CAATTAACAAAAGTA CCCATATAATAC TGA GTATTATATGGC GTTGTAAAAATATTG TERM 814 751419 - 751446 + g 78 -9.4 -3.33583 | gap 1, opp_overlap 751417 751416 751419 751420, overlap 751419 CAATTAACAAAAGTA C-CCATATAATAC TGA GTATTATATGGCG TTGTAAAAATATTGT TERM 815 751444 - 751420 - G 100 -13.1 -2.56514 | opp_overlap 751419 751419, overlap 751419 751417 751416 AATTAACAAAAGTAC CCATATAATAC TGA GTATTATATGG CGTTGTAAAAATATT TERM 816 751881 - 751909 + H 100 -14.9 -2.54193 | opp_overlap 751875 751874, overlap 751890 CTCGAAAATTGTGGA TTTACTATATGCA TAT TGCATATAGTAAA TAACTTAAGATAATA hldD 752038 - 753000 + | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 817 753025 - 753011 - f 71 -5.8 -4.72631 | opp_overlap 753009 753006 753005 753011, overlap 753006 ATTAAGTGAATAAAA TTTTCA TTG TGAAAA TATTAGTTATTAGTC rfaF 753019 - 754059 + | ADP-heptose; LPS heptosyl transferase II TERM 818 754495 - 754516 + G 82 -5.1 -5.37043 | opp_overlap 754488 754494 754492 754495 AATAAAAATCAACAC GCTGTGGAG CGCA TTCGACAGC TTTTTTCTCTCAGCT rfaC 754081 - 755052 + | ADP-heptose; LPS heptosyl transferase I TERM 819 755054 - 755030 - f 73 -4.5 -5.31877 | opp_overlap 755030 755030 755046 755047 755048, overlap 755037 755046 755048 ACTCATTACAAAAAA TTTTAAATTTA AAA TATATTTAAAA AATATTTTTTTAAAC TERM 820 755046 - 755058 + F 71 -3.5 -5.48303 | opp_overlap 755030 755046 755037 755048, overlap 755030 755047 755048 TTTAAATTTAAAATA TATTT AAA AAATA TTTTTTTAAACTTGT TERM 821 755088 - 755120 + F 74 -3.8 -5.68438 | gap 1, opp_overlap 755094 755115, overlap 755077 755073 755097 755115 TTTATATAAACCTTA TATTAATTT-TAATG CTTT CATTATAAATTGATA TTTTTTGTTTGATAA TERM 822 755115 - 755148 + F 100 -14.3 -2.52543 | opp_overlap 755115, overlap 755088 TGCTTTCATTATAAA TTGATATTTTTTGTT TGAT AACAAAAAATATCAA TCCGTTAGGAGCAAT TERM 823 755148 - 755115 - f 100 -14.3 -3.96148 | opp_overlap 755088 755115 TGCTTTCATTATAAA TTGATATTTTTTGTT TGAT AACAAAAAATATCAA TCCGTTAGGAGCAAT TERM 824 755217 - 755230 + F 73 -3.9 -5.5112 | opp_overlap 755217, overlap 755219 ATAAAAAGAATAATA TCTAA AAAA TTAGA TTTTTTATTGATGAA TERM 825 755236 - 755253 + F 74 -5.7 -4.76892 | overlap 755219 AAAAATTAGATTTTT TATTGAT GAAT ATCAATA TTTTTAAATTAATAT TERM 826 756322 - 756306 - f 71 -6.7 -3.9735 | opp_overlap 756303, overlap 756303 ATAGTAAAAAAGTAA TTGAAAA TTA TTTTCAA ACAACTTGTAATAAA TERM 827 756954 - 756986 + G 76 -9.5 -3.16191 | opp_overlap 756954 756963 ATGATATGTTTATAA TATACATTACAATAT ATA ATATTATAATGTATA TTGCTCAACCTATAA TERM 828 756986 - 756954 - g 89 -11.7 -3.32521 | opp_overlap 756954, overlap 756963 ATGATATGTTTATAA TATACATTACAATAT ATA ATATTATAATGTATA TTGCTCAACCTATAA TERM 829 757518 - 757508 - g 71 -5.4 -4.64861 | opp_overlap 757508 GCTGCTCAAAATAAA GAAG ACG CTTC TCGATTTCTTAAATT kdtA 756944 - 758227 + | 3-deoxy-D-manno-octulosonic-acid transferase coaD 758957 - 759472 + | CMP-deoxy-D-manno-octulosonate-lipid A transferase TERM 830 759463 - 759451 - T 75 -2.7 -5.96219 | overlap 759461 TACTGAGAAAAAAAA CAAAA ACA TTTCG TTTCTTTAAAAAAGA rpmG 759864 - 759697 - | 50S ribosomal subunit protein L33 rpmB 760116 - 759889 - | 50S ribosomal protein L28 TERM 831 760350 - 760363 + H 75 -2.5 -6.01725 | opp_overlap 760350 TCTAAATATAGTAAA TTTAA GTCA TTAAA TTTTTTGTTTTTATT TERM 832 760506 - 760564 + H 100 -28.4 -2.76964 | opp_overlap 760506 760511 760526 760532, overlap 760511 760526 ATCATGTGAAGATGA TTTAATTTTATTTATACTAACAAAAACT AAC AGTTTTTGTTAGTATAAATAAAATTAAA TCATCTTCAATATCA TERM 833 760564 - 760506 - H 100 -28.4 -2.75252 | opp_overlap 760506 760511 760526, overlap 760511 760526 760532 ATCATGTGAAGATGA TTTAATTTTATTTATACTAACAAAAACT AAC AGTTTTTGTTAGTATAAATAAAATTAAA TCATCTTCAATATCA TERM 834 760559 - 760511 - H 100 -23.9 -3.13432 | opp_overlap 760506 760511 760526, overlap 760506 760526 760532 GTGAAGATGATTTAA TTTTATTTATACTAACAAAAACT AAC AGTTTTTGTTAGTATAAATAAAA TTAAATCATCTTCAA TERM 835 760511 - 760559 + H 100 -23.9 -3.13432 | opp_overlap 760511 760506 760526 760532, overlap 760506 760526 GTGAAGATGATTTAA TTTTATTTATACTAACAAAAACT AAC AGTTTTTGTTAGTATAAATAAAA TTAAATCATCTTCAA TERM 836 760544 - 760526 - H 76 -9 -3.2794 | opp_overlap 760511 760506 760526, overlap 760511 760506 760532 TTTTATTTATACTAA CAAAAACT AAC AGTTTTTG TTAGTATAAATAAAA TERM 837 760526 - 760544 + H 76 -9 -3.2794 | opp_overlap 760526 760511 760506 760532, overlap 760511 760506 TTTTATTTATACTAA CAAAAACT AAC AGTTTTTG TTAGTATAAATAAAA TERM 838 760548 - 760532 - H 76 -5.2 -5.16841 | opp_overlap 760526 760511 760506, overlap 760526 760511 760506 TTATACTAACAAAAA CTAACA GTTTT TGTTAG TATAAATAAAATTAA TERM 839 761759 - 761745 - g 95 -3.6 -6.59152 | opp_overlap 761745 TTAAGAAAAAAAAAA TTGTTA GCA CAACAA CTTATTAACGAAATT dfp 760593 - 761801 + | 4'-phosphopantothenoylcysteine decarboxylase dut 761788 - 762237 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 840 762438 - 762452 + F 76 -4.4 -5.36314 | overlap 762444 ATTTCAAGTGATTGT TTATTT TTA AAATAA TTTTTTAATATTTTA TERM 841 762570 - 762560 - f 72 -2.6 -5.88565 | opp_overlap 762539 762545, overlap 762552 TTTATAATAAAAAAA TATT TTT AATA ATAAATATAATAAAA TERM 842 762629 - 762659 + F 100 -14.4 -4.38774 | opp_overlap 762633 CAAACTTTTATTTTA TATACTTTAAACAT AAT ATGTTTAAAGTATA TTTTACTATGCTATT TERM 843 762655 - 762633 - f 83 -10.8 -2.89564 | opp_overlap 762629 CTTTTATTTTATATA CTTTAAACAT AAT ATGTTTAAAG TATATTTTACTATGC yicC 762965 - 763846 + | hypothetical protein TERM 844 764195 - 764161 - f 77 -8.8 -3.66556 | opp_overlap 764158 764157 764165 764191, overlap 764165 AAGTTTTTAATATAA TTTAGCACTCAAAT TCATTTT ATTTGAGTGCTATA TAAATTTATATAGTT TERM 845 764165 - 764191 + F 77 -9.6 -2.99948 | opp_overlap 764161 764165, overlap 764158 764157 TTTTAATATAATTTA GCACTCAAAT TCATTTT ATTTGAGTGC TATATAAATTTATAT TERM 846 764191 - 764165 - f 75 -9.6 -2.66255 | opp_overlap 764165 764158 764157, overlap 764161 TTTTAATATAATTTA GCACTCAAAT TCATTTT ATTTGAGTGC TATATAAATTTATAT TERM 847 764374 - 764356 - f 78 -6.2 -4.84359 | opp_overlap 764331 764329 764356, overlap 764331 TTATTTTCATAAAAA TATAAAAT ATT ATTTTATA TTTTATAATAAAATT TERM 848 764356 - 764374 + F 74 -6.2 -4.47328 | opp_overlap 764331 764356, overlap 764331 764329 TTATTTTCATAAAAA TATAAAAT ATT ATTTTATA TTTTATAATAAAATT TERM 849 765035 - 765060 + G 100 -13.5 -2.52464 | opp_overlap 765039 765042, overlap 765039 765042 TATATGGGGTTTTCA TCAAGAACTGT TGTA ACAGTTCTTGA TGCATTAGAAAAAGA TERM 850 765039 - 765056 + G 74 -8.5 -3.21912 | opp_overlap 765039 765042, overlap 765035 765042 TGGGGTTTTCATCAA GAACTGT TGTA ACAGTTC TTGATGCATTAGAAA TERM 851 765056 - 765039 - g 72 -8.5 -3.14132 | opp_overlap 765039 765035 765042, overlap 765042 TGGGGTTTTCATCAA GAACTGT TGTA ACAGTTC TTGATGCATTAGAAA BPEN_640 764849 - 765289 + | MarR family transcriptional regulator TERM 852 766196 - 766186 - g 71 -3.2 -5.15634 | overlap 766173 TAGCGCATCAAAAAA TACG CTA CGCA ACATTAATCAATCAT gmk 765594 - 766232 + | guanylate kinase rpoZ 766329 - 766520 + | DNA-directed RNA polymerase, subunit K/omega TERM 853 768080 - 768060 - g 75 -8.4 -3.57263 | opp_overlap 768052 ACTTTTATGCCTAAA CCCATTAT AAATG ATAATGGG TCAGGCATGCATTGC TERM 854 768361 - 768347 - g 75 -2.8 -5.56112 | AGAAAAATCAAAAAA CGAC GCAGCAT GTCG CGTTGAAGTTCGTTT glnA 767280 - 768704 + | glutamine synthetase TERM 855 768794 - 768778 - f 76 -5.3 -5.1925 | overlap 768790 TGATAATTCAAAAAA TTTTATT AAA AATAAAA ACAATTTGTTTTTTG yihA 768897 - 769496 + | GTP-binding protein polA 772453 - 769643 - | DNA polymerase I TERM 856 770353 - 770337 - G 71 -2.3 -5.32944 | GCTACAATTAAAAAA TTTTTTG GAG CAATAAA AGCCTGACGTATTTT dsbA 773277 - 772648 - | periplasmic protein disulfide isomerase I ubiD 775367 - 773904 - | 3-octaprenyl-4-hydroxybenzoate decarboxylase ubiB 777215 - 775575 - | 2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway TERM 857 776242 - 776258 + g 74 -2.3 -5.63517 | overlap 776244 GCTATGAAATTTGCT GCTAAAT AGT ATTTATC TTTTTTATTTAAAGA TERM 858 776417 - 776434 + g 82 -2.8 -6.04324 | CTATTCCACGTTCTG CTAATA ATTTCA TATTAG TTTTTTGTTTTTTAA ubiE 778569 - 777805 - | 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase TERM 859 777991 - 777973 - G 73 -9 -2.91383 | ATCTTGAGTTATACA TTTACCTA TTT TAGGTAAA ATATGAAATGAATAT yigN 780244 - 778676 - | hypothetical protein udp 781285 - 780488 - | uridine phosphorylase metE 783812 - 781518 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase rpoH 784964 - 784116 - | RNA polymerase factor sigma-32 TERM 860 784523 - 784537 + g 76 -7.2 -4.21275 | opp_overlap 784523 784518, overlap 784519 CTGCATTAAACCAAC CTAAAC GTT GTTTAG TTTTGCGTAGATTAA ftsY 786498 - 785572 - | cell division protein TERM 861 785847 - 785861 + g 91 -4.4 -6.00814 | overlap 785855 TTGCATCAATTTTTG TTATTA CTC TAATAA TTTTTTTTAGTTCTT TERM 862 786168 - 786186 + g 95 -4.6 -6.17268 | CACCATTAACCCCTA CCATTAAT ATA ATAAATGG TTTTTTTTCTTGTAA TERM 863 786523 - 786539 + H 76 -3.8 -5.85425 | CCTCATAATTATCAT TAACAT ATACG ATGTTA TTTTTTATTTATTTC yhhF 786893 - 787480 + | methyltransferase pgi 789230 - 787575 - | glucose-6-phosphate isomerase TERM 864 789314 - 789342 + r 86 -9.8 -4.1897 | gap 1, opp_overlap 789313 CGCGCCATAACTCAT TCAGGTTACTACA TAAA TGTAGTAACC-GA TTTATATATATAATT TERM 865 789605 - 789586 - R 88 -9.4 -4.60292 | opp_overlap 789594 CACAATAACAACAAA CTCAAAAC TATA GTTTTGAG GAAATTATATAATTT metA 790625 - 789711 - | homoserine O-succinyltransferase TERM 866 790504 - 790550 + g 79 -6.8 -4.65895 | opp_overlap 790508 790509, overlap 790505 790507 790508 790512 TTTGGCATTAAATTA AGAATCAATACTTTTAAAGAAC TCT GTTCTTTAAAAGTATTGCGTGA TTTTTGCATAACAAA TERM 867 790505 - 790549 + g 85 -10.3 -3.39216 | opp_overlap 790508 790509, overlap 790504 790507 790508 790512 TTGGCATTAAATTAA GAATCAATACTTTTAAAGAAC TCT GTTCTTTAAAAGTATTGCGTG ATTTTTGCATAACAA TERM 868 790507 - 790547 + g 100 -12.9 -3.26405 | opp_overlap 790508 790509, overlap 790505 790504 790508 790512 GGCATTAAATTAAGA ATCAATACTTTTAAAGAAC TCT GTTCTTTAAAAGTATTGCG TGATTTTTGCATAAC TERM 869 790508 - 790546 + g 100 -16.4 -2.55361 | opp_overlap 790508 790509, overlap 790507 790505 790504 790512 GCATTAAATTAAGAA TCAATACTTTTAAAGAAC TCT GTTCTTTAAAAGTATTGC GTGATTTTTGCATAA TERM 870 790546 - 790508 - G 100 -16.4 -3.91541 | opp_overlap 790508 790507 790505 790504 790512, overlap 790509 GCATTAAATTAAGAA TCAATACTTTTAAAGAAC TCT GTTCTTTAAAAGTATTGC GTGATTTTTGCATAA TERM 871 790545 - 790509 - G 100 -19.9 -2.94202 | opp_overlap 790508 790507 790505 790504 790512, overlap 790508 CATTAAATTAAGAAT CAATACTTTTAAAGAAC TCT GTTCTTTAAAAGTATTG CGTGATTTTTGCATA TERM 872 790512 - 790542 + g 100 -15.8 -3.21225 | opp_overlap 790509 790508, overlap 790508 790507 790505 790504 TAAATTAAGAATCAA TACTTTTAAAGAAC TCT GTTCTTTAAAAGTA TTGCGTGATTTTTGC