TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.425706 %AT, 3398360 nt, 32791 terms. Intergenic: 0.51674 %AT, H2T: 381235 nt, 3053 terms; T2T: 80156 nt, 1792 terms; H2H: 115785 nt, 2015 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|158520017|ref|NC_009943.1| Candidatus Desulfococcus oleovorans Hxd3, complete genome (length 3944167) TERM 1 588 - 558 - g 71 -7.4 -4.11216 | overlap 562 CGGGCATGGGCAAAA GCCATCTGGCCCAG GCA CTGGGCCACCAGAC CATAAAAGCCCAGCC Dole_0001 50 - 1432 + | chromosomal replication initiator protein DnaA TERM 2 2970 - 2958 - g 85 -3.3 -5.4505 | GCGGCGAATAAAAAA GGTGT TTG ACCCC AACGGAATTTTAAAT Dole_0002 1624 - 3012 + | FAD linked oxidase domain-containing protein Dole_0003 3234 - 3019 - | hypothetical protein Dole_0004 4013 - 3231 - | inositol-phosphate phosphatase TERM 3 3645 - 3657 + g 71 -10.5 -3.53012 | GGCGGTAAACAGCTC CCCGG TTT CCGGG TTTAACACCACGCCG TERM 4 3729 - 3717 - G 74 -6.9 -4.37198 | AATGGAAACGCAAAA CAGCC CCA GGCCG TGAGCAAAGTTGGTG TERM 5 3951 - 3939 - G 90 -6.9 -5.14965 | opp_overlap 3939, overlap 3940 3941 ACGGCCACGAAAAAA GGCGC GCA ACGCC CGGGCGCCTTTAAAC Dole_0005 5764 - 4067 - | GTP-binding protein HSR1-related TERM 6 4530 - 4542 + g 86 -9.1 -4.57837 | AACAGCCGGTCCGCA GTGGC CAC GCCAC TTTTTGACAGGGTGT TERM 7 5731 - 5754 + g 86 -3 -5.63103 | gap 1, overlap 5718 GGTGGTCGGCCTTGA GGCCGC-CGGT GTT GCCGTGGGGTC TTTTTTTCATTCAGG Dole_0006 7230 - 5815 - | replicative DNA helicase TERM 8 5939 - 5950 + g 71 -7.2 -4.21768 | ATGATCTCCGCGGAT CCCC GGTT GGGG TTTTCCGGTTCCTTG Dole_0007 7734 - 7279 - | ribosomal protein L9 TERM 9 7618 - 7630 + g 71 -6.9 -4.18018 | GCGGTTGGCCGGAGT GGCCG CCA TGGCC TTTTGCCTGGGGAAA Dole_0008 8940 - 7957 - | hypothetical protein TERM 10 8152 - 8140 - G 78 -3.3 -5.07652 | overlap 8148 GGTTTCAAAATAAAA CGACA CAA TGGCG ATGCCCTGAAAAAAA TERM 11 8852 - 8830 - G 79 -5.4 -4.77036 | overlap 8811 8808 CGGCAGCATGAAAAA CGCCGCCACC CCC AGCACCGGCG ACAGGCCCGCCGCAA Dole_0009 9213 - 8962 - | ribosomal protein S18 TERM 12 9172 - 9186 + g 89 -4.2 -5.63374 | overlap 9174 CCGGCAGTACTTGCG CCTGTG AAA CACACG TTTTTTTCCTCTTGG Dole_0010 9773 - 9267 - | ribosomal protein S6 TERM 13 9399 - 9435 + g 88 -10.8 -4.43392 | CTCGTCGTCACCATC GGCCGG-GGCCGCGTCCG CGG CGGCC-TGGCCTTCGGCC TTCTTTTCCTTTTCC TERM 14 9818 - 9797 - R 100 -15.1 -4.30719 | overlap 9793 CTTTTGGATAATAAA GCCCCGGGG CTTT CCCCGGAGC AAGGATAAAAACATC TERM 15 10092 - 10051 - R 73 -10 -3.40052 | overlap 10049 10055 AGATTGGGAAGAACA CGAAGCGGGGGGTGCC GATTCGGCAG GGCTCCCGCCGCATCG AAATCGGGATCGGGC TERM 16 10279 - 10302 + r 100 -18.2 -5.72207 | opp_overlap 10279 CAACAACAAAAAAAA GCCTCCGGGA TTGT TCCCGGAGGC TTTTTTTAATTTACC TERM 17 10302 - 10279 - R 100 -18.2 -6.22691 | opp_overlap 10279 CAACAACAAAAAAAA GCCTCCGGGA TTGT TCCCGGAGGC TTTTTTTAATTTACC TERM 18 10325 - 10345 + r 77 -4 -5.1101 | opp_overlap 10316 10325 AATTTACCGCTAAAA GAGCGAAA AACAC TTTAGCTC TTTTTTAAATGATCA Dole_0011 11674 - 10367 - | hypothetical protein TERM 19 11832 - 11844 + r 78 -9.1 -4.03204 | opp_overlap 11829 ATACGCCCAAACCCC TGCCC GCC GGGCA TTTATGGATTTGCTG TERM 20 11903 - 11888 - R 73 -4.8 -4.71307 | TAAAAATTAAATAAA TTATCA ATAG TGATAA CCGCAAATCCATCTG Dole_0012 13690 - 11993 - | integrin-like repeat-containing protein TERM 21 12355 - 12395 + g 70 -4.8 -4.4267 | TCTCGTTATCGCTGT CCTCTTTGGTGGTA ATATAGGTTTCGC TGCCGCCAAAGGGG TTTTCACTTTTCCAG TERM 22 12778 - 12824 + g 88 -11.5 -4.25104 | gap 1, opp_overlap 12776 12773 AGGTGACAAAGATCT CGGCCTGGCCGTTGTTGTCCGT ATCC ACGG-CATCCACGGCCAGGGGG TTTTCGTAGCCGGCC TERM 23 13136 - 13152 + g 72 -9.3 -3.6682 | overlap 13123 CACGGCCACCGGGAC CGGGGCC GGT GGCCCGG TTTCCGTGGGTGCGG Dole_0013 15190 - 13760 - | glutamyl-tRNA(Gln) amidotransferase, B subunit TERM 24 15204 - 15216 + H 71 -6.9 -4.27584 | ATTTTTTGCCGATCC GCCCG TTA TGGGC TTTTGGGTTACACAT TERM 25 15429 - 15418 - g 100 -7.2 -5.86332 | opp_overlap 15427, overlap 15419 TGAATCCAAAAAAAA GCGG CTGG CCGC CAGGACATCCGGGGC TERM 26 16438 - 16426 - g 72 -4.7 -4.66264 | overlap 16427 CAAAACCTTCAAAAA CGGGG AGC CCCCC CTGACCGCCGACCAG TERM 27 16622 - 16596 - g 85 -16.6 -2.65442 | ATATTACCGACATCA CCATTGCCTCGG CAA CCGAGGCCATGG ATAAAAACGGCACCA TERM 28 16640 - 16630 - g 80 -4.6 -4.87665 | overlap 16631 GGCCATGGATAAAAA CGGC ACC ACCG AAATGCCCGTCGTTT Dole_0014 15398 - 16750 + | putative ribonuclease BN TERM 29 16919 - 16897 - T 80 -8.4 -4.43571 | overlap 16900 AGAAAAGTACCAAAA GAATCACGCC GCA GGCGTGACTG CCCTCGCGCAAACGG TERM 30 16916 - 16900 - T 95 -12.3 -4.29953 | overlap 16897 AAAGTACCAAAAGAA TCACGCC GCA GGCGTGA CTGCCCTCGCGCAAA TERM 31 16945 - 16993 + T 77 -6.7 -4.56597 | gap 3, opp_overlap 16956 16960 AACGGGTTTTCCGGC GCGGGCAGG--AACTCA-CCCCGC TTTC GCGGGGTTCAGACAGCCTGCCCGC TTTTTCCGGAAAACC TERM 32 16975 - 16960 - T 75 -11.8 -2.56596 | opp_overlap 16945, overlap 16956 GCGGGCAGGAACTCA CCCCGC TTTC GCGGGG TTCAGACAGCCTGCC Dole_0015 17657 - 17136 - | carboxymuconolactone decarboxylase TERM 33 17726 - 17750 + r 70 -10 -3.15579 | overlap 17729 GCATTCACTCGTCAC TGCGGCGTAC ACTGA GTACGCCTCA TTCCTCGGAACTTGC TERM 34 17729 - 17747 + r 71 -10.3 -2.78018 | overlap 17726 TTCACTCGTCACTGC GGCGTAC ACTGA GTACGCC TCATTCCTCGGAACT TERM 35 17933 - 17916 - R 74 -11.3 -3.06133 | overlap 17904 17900 CAAGGGCTGACTGAA GGCGTAC TGTT GTACGCC GCACAAGGAAGCCCG Dole_0016 18588 - 17995 - | hypothetical protein Dole_0017 19362 - 18772 - | hypothetical protein TERM 36 18913 - 18937 + g 85 -14.9 -3.02043 | overlap 18932 CGACACCGGAAGGGC GGCCGGTGCTG GAG CGGCCCCGGCC TGTTGCAGGGCGGTT TERM 37 18932 - 18950 + g 71 -10.2 -3.53444 | overlap 18913 GGTGCTGGAGCGGCC CCGGCCTG TTG CAGGGCGG TTTCAAAGGCGGTGG TERM 38 19080 - 19092 + g 78 -6.2 -4.66833 | overlap 19078 GTCGCATTCCCTGGG CCGG GGCCG CCGG TTTTTCCGCTTGCGG Dole_0018 20346 - 19366 - | hypothetical protein Dole_0019 20849 - 20373 - | hypothetical protein Dole_0020 22312 - 20846 - | hypothetical protein TERM 39 21829 - 21839 + g 100 -8.2 -5.75342 | ACTCGGCCAGGGCCT CGGG ATA CCCG TTTTTTTTGGCCAGG Dole_0021 23017 - 22361 - | hydrolase Dole_0022 23517 - 23014 - | hypothetical protein TERM 40 23548 - 23572 + r 77 -4.2 -5.0538 | GGTTTTGACCTGCTC CACGCGAAGC TCGGC GGTTCCCGTG TTTTTTACGGTAAAG Dole_0023 23751 - 23527 - | hypothetical protein Dole_0024 24261 - 23770 - | phosphodiesterase TERM 41 23857 - 23880 + g 88 -5.3 -5.28176 | CAGCAGTTCGCCAGG GTTGACCAC CAGGGT GTGGTTGAC TTTTTTCTGCATCCA TERM 42 24009 - 23977 - G 100 -15.5 -4.24342 | GCCGTCATGAATAAA GGCCACCTGTCGACC GTC AGCCGCCAGGCGGCC AAAATCGCCGTGAAG TERM 43 24340 - 24315 - R 73 -2.3 -5.02074 | opp_overlap 24325 24330, overlap 24321 24322 GTATCGGGCAAAAAA GTCAAAGGCCG GGGT CGGCCGGCGCC GTTACCTTTGATTTA TERM 44 24334 - 24321 - R 81 -9.5 -4.05875 | opp_overlap 24325 24330, overlap 24315 24322 GGCAAAAAAGTCAAA GGCCG GGGT CGGCC GGCGCCGTTACCTTT TERM 45 24824 - 24802 - R 70 -9.9 -3.11702 | gap 1, overlap 24800 24799 TTATTGAATAAATCA CGGG-CAAGC TGTC GCTTGGCCCG GGGCACCCGCCAAAA Dole_0025 27145 - 25106 - | primosomal protein N' TERM 46 25212 - 25224 + g 78 -6.2 -4.57837 | AAGGACTTGACCGCT GCCG CGGAC CGGC TTTTTAAAAGGATCT TERM 47 25300 - 25325 + g 72 -4.7 -4.57073 | opp_overlap 25312 GGCCCAGCACCTCCA CAGCGCC AAAGACCGCGGG GGCGCTG TTTTTCAGGGCCGTG TERM 48 25567 - 25540 - G 70 -11.9 -2.82742 | overlap 25537 AGGTCTGCAGAATCA CCCGGCCGGGA TCCACG CCCCGGCCGGC CCGGCCCGCAACCTG TERM 49 26776 - 26814 + g 87 -3.6 -5.40474 | opp_overlap 26767, overlap 26773 26777 GCAGAATGGGGTCTC CCACGGCGTCTTTCGGAA TTT TTCCGACCGGCGGCGCGC TTTTTTTCGGCAGGT TERM 50 26946 - 26956 + g 74 -2.4 -4.88405 | CCGTCGTCCAGCACG GCCG CCA CGGG TTTTATTTCAGCATT TERM 51 27202 - 27166 - R 100 -17.4 -4.59773 | gap 1, overlap 27168 27171 TCCCAGTGGCAAAAA CAGCAGCAGGGGCGACC TTAA AGTCGCCCCTGC-GCTA TCAGCATTGTGATTC TERM 52 27200 - 27168 - R 100 -17.8 -3.91506 | gap 1, overlap 27166 27171 CCAGTGGCAAAAACA GCAGCAGGGGCGACC TTAA AGTCGCCCCTGC-GC TATCAGCATTGTGAT TERM 53 27198 - 27171 - R 100 -19.2 -3.01831 | overlap 27168 27166 GTGGCAAAAACAGCA GCAGGGGCGACC TTAA AGTCGCCCCTGC GCTATCAGCATTGTG Dole_0026 28541 - 27261 - | citrate synthase I TERM 54 27778 - 27737 - G 83 -13.6 -3.33315 | gap 1, overlap 27728 CGAACATCTCCACAA CGGCCCGGTTGGCGCCGCC GTGCA GGGGGCCCCA-CAGGGCCG CGATACCGGCGGACA Dole_0027 28802 - 29572 + | hypothetical protein TERM 55 29867 - 29855 - g 81 -3.3 -5.29782 | opp_overlap 29860 CATATTCACAAAAAA GATGC CCG GCAAC TGACCGGATTTTTTA Dole_0028 29588 - 30250 + | beta-lactamase domain-containing protein Dole_0029 30918 - 30274 - | two component LuxR family transcriptional regulator Dole_0030 36115 - 30896 - | ATPase domain-containing protein TERM 56 30950 - 30983 + g 81 -3.7 -5.07567 | opp_overlap 30971, overlap 30952 TTGATTTTCGCCTGT CAGGGGAACCGTAAT ATCA ATCGTGGTGCCCCGG TTTTTTCCGGTATCA TERM 57 31797 - 31831 + g 95 -6.4 -5.49729 | overlap 31799 GCCCGGGGGGTGCCG GCGTCATCACTGTTTT TCT GAAACAGCGACGACTC TTTTTTTACATCGTT TERM 58 31799 - 31829 + g 77 -7.6 -4.37763 | overlap 31797 CCGGGGGGTGCCGGC GTCATCACTGTTTT TCT GAAACAGCGACGAC TCTTTTTTTACATCG TERM 59 32035 - 32010 - G 75 -9 -4.05788 | gap 2, opp_overlap 32023 CGGTTGGAAATGAAA GCGGCC--CGGC TGGC GCCGGTGGCCGC CATGGTGATTTCCAT TERM 60 32748 - 32720 - G 73 -3.2 -4.80737 | opp_overlap 32729 CAACAGAAAAAAGAA TCGCAG-CAGCAGG TTG CCCG-TGTCTACGA CCGCCGCGAACTCAG TERM 61 34398 - 34388 - G 87 -8.2 -4.72272 | opp_overlap 34387 CTGCCGGATGAAAAA GGGG TTG CCCC CGGTCTTTTCAAAAA TERM 62 34592 - 34553 - G 88 -15.8 -3.14344 | gap 1 CAGCTTTTCCAGGAA CCGGGAGAGCG-GGTGG GTGTCGT CCACCTCGCTGTCCCGG CAGGTACCCAGCACC TERM 63 35429 - 35410 - G 71 -11.4 -3.21276 | gap 1, opp_overlap 35399 35397 35425, overlap 35408 TGTGCCCGTACAACA CGCCGGCGG CAT CC-CCGGCG GGGAACGGGTGTTTT TERM 64 35593 - 35577 - G 79 -7.2 -4.56775 | ACGCCGGCCGAAAAA CCGCCC TGTTC GGGCAG CCACGCGTCATCCCA TERM 65 36203 - 36184 - R 74 -9.3 -3.70902 | GCCGTGATATGTAAA CTTGCCG CTGTGC CGGCAAG AAAGCGTCCCGCTAC Dole_0031 37147 - 36230 - | hypothetical protein TERM 66 36445 - 36468 + g 79 -13.9 -3.02511 | TCTTGACCCGTTGCA TGCTGGCCG CCACAT CGGCCAGCA TGTTCCGCAGGTCGG Dole_0032 37847 - 37152 - | hypothetical protein TERM 67 37515 - 37504 - G 76 -4.4 -4.82901 | TTCTTGTCATAAAAA TCTG AAAG CAGA AGGTTTTCCAGGATG Dole_0033 38633 - 37857 - | hypothetical protein TERM 68 38109 - 38082 - G 70 -2.7 -4.8667 | GATATCCGACAAAAA GTTGCCCAC GGGAATCGAG GTGGTCAAC CGTACCACGCCGTAG TERM 69 38693 - 38714 + H 73 -2.3 -5.07567 | overlap 38694 CCACCGTACCGGACG GCAAGCA CATTGACT TGTTTGC TTTTTTACACTATAA TERM 70 38787 - 38752 - H 79 -10.2 -3.69434 | overlap 38770 TTAAGCAACTCGAAA CCGTCGGCCGCACGCA AAGC CGCGGGCAGCCGTGGG ACGCGGCAGCGACGG TERM 71 39070 - 39058 - g 78 -3.3 -5.1675 | overlap 39059 CCATTGATGAAAAAA GCCTG AAA CAGGA GGGCCGGTGGGTGTG TERM 72 39296 - 39278 - g 100 -11.7 -4.70659 | opp_overlap 39278 39277, overlap 39290 39293 GGCCACACTGAAAAA CCGGTCG GACAA CGACCGG ATTCTGGTGGAAGCC TERM 73 40109 - 40121 + G 100 -9.1 -5.06414 | GTTCGGCGGGTACCT CTGGC TGT GCCAG TTTTTCTTCACCCAC TERM 74 41027 - 40995 - g 76 -11.9 -3.33696 | GCCTGGTTCAAGGAA GCCCTGGCCGTCACC CCG GATGACGGCCCCAGC CTGACCATGATCCGC Dole_0034 38838 - 41114 + | TPR repeat-containing adenylate/guanylate cyclase TERM 75 41335 - 41321 - g 71 -12.8 -2.62184 | opp_overlap 41325, overlap 41306 CCGTGGCCGACACCA CCCCGG ACG CCGGGG AAAAAGCCCGGGCCC TERM 76 41899 - 41877 - g 81 -12.6 -3.54424 | opp_overlap 41874 GCCCATTGCCGTAAA CGGCACCCGG TAC CGGGGCGCCG TGGTGGTGTCGGCCG TERM 77 42099 - 42068 - g 76 -2.8 -4.90471 | gap 1, overlap 42069 42070 ATGTAAAACAGAAAA GCGCGGACCGGTCCT TTG ATGTCCGGGCCAC-C ACGGCCTCACAGGTC Dole_0035 41182 - 42708 + | SpoIID/LytB domain-containing protein TERM 78 42863 - 42843 - f 82 -10.3 -3.90112 | opp_overlap 42825 42824 GCGCCCTCAAGCAAA GGCGACGGC TTT GCCGCCGTC GATGGTCAGACAACC Dole_0036 42966 - 43844 + | hypothetical protein Dole_0037 43905 - 45068 + | TPR repeat-containing protein TERM 79 45489 - 45502 + G 75 -9.5 -3.89212 | TTTCCAAGTGGGTCT CCGGC AGCA GCCGG TTTGATGTCTCCATG TERM 80 45652 - 45673 + G 73 -12.9 -2.71712 | opp_overlap 45637, overlap 45652 GGCTTCGGCCCCGCA GGCGGCGGG CGCG CCCGCCGCG CTTTCCGCGCCCCGG TERM 81 45652 - 45674 + G 81 -12.7 -3.53012 | gap 1, opp_overlap 45637, overlap 45652 GGCTTCGGCCCCGCA G-GCGGCGGG CGCG CCCGCCGCGC TTTCCGCGCCCCGGC Dole_0038 45095 - 45967 + | putative periplasmic protein TERM 82 46006 - 45972 - f 88 -14.3 -2.79302 | opp_overlap 45968, overlap 45974 ATCAGCCTTAGCATA CAGGGGGCATGAGGC CTTTT GCTTCATGTCCCCTG CCCCTGATTCCAGGC TERM 83 46004 - 45974 - f 74 -11.1 -2.94416 | opp_overlap 45968, overlap 45972 CAGCCTTAGCATACA GGGGGCATGAGGC CTTTT GCTTCATGTCCCC TGCCCCTGATTCCAG TERM 84 46085 - 46117 + F 100 -13.6 -4.15044 | opp_overlap 46090 46093 CAGGCCGAGCATCCT CATAATAAGGAGGG AGCAG CCCTCCTTATTCTG TTTATTAAGGAACCG TERM 85 46112 - 46090 - f 85 -12.1 -3.31792 | opp_overlap 46085, overlap 46093 CGAGCATCCTCATAA TAAGGAGGG AGCAG CCCTCCTTA TTCTGTTTATTAAGG TERM 86 46109 - 46093 - f 76 -9.4 -3.79906 | opp_overlap 46085, overlap 46090 GCATCCTCATAATAA GGAGGG AGCAG CCCTCC TTATTCTGTTTATTA TERM 87 46181 - 46154 - g 81 -4 -5.07652 | gap 1, overlap 46156 TGTCTGAAAAGAAAA CGCCGG-ACAGGC CGG ACCTGAGCCGGTG GACCCCGGTGGAGGA TERM 88 46375 - 46365 - g 74 -6.8 -4.27316 | CGCTGCAATGGAAAA GGAC GCC GTCC GAATCACGAAACTGC Dole_0039 46138 - 46875 + | nitroreductase TERM 89 47361 - 47371 + G 89 -2.4 -5.75342 | overlap 47358 GCAACGTGATTTTGG GCGG TTC CCGG TTTTTTTTAAACGAG TERM 90 47401 - 47422 + G 76 -5.1 -4.82901 | GGCCCTTCGCGGCCG GCTGTTTTC GACG GTAAACGGC TTTTTATCCAAAACC TERM 91 47557 - 47569 + G 74 -6.2 -4.54404 | opp_overlap 47549, overlap 47549 CGATGAACAGGCCAA CCGG ATGGC CCGG TTTCTTCTTGCTTTG TERM 92 47778 - 47799 + G 75 -8.7 -4.07568 | overlap 47763 CCGAACTGGCAGACG CGGTCCG GTCGGTTG CGGACCG TTTTGAACAGCGCAA TERM 93 47838 - 47820 - g 87 -3.8 -5.46629 | overlap 47824 47833 AACAGCGCAAAAAAA TCATTGTC AAC GACATCGA AGCCGAGGCCCGGGG TERM 94 48584 - 48568 - g 87 -7.2 -4.93296 | overlap 48569 GGAGTATTACAAAAA CCCGGC AGCCA GCCGGA AAAAATCCGGTGACG Dole_0040 46877 - 49003 + | AMP-dependent synthetase and ligase TERM 95 49515 - 49505 - g 84 -2.4 -5.40072 | CGCCGGTGAAAAAAA CGGG GTT CCCT GCCTGATCTCCCTGG Dole_0041 49047 - 50552 + | acyl-CoA dehydrogenase domain-containing protein Dole_0042 51408 - 50587 - | pantoate--beta-alanine ligase TERM 96 50749 - 50738 - G 75 -5.8 -4.56597 | GCGGTGTCGGAAAAA CCTG CTAT CAGG TTCCGGGCCGCTTCG TERM 97 51171 - 51202 + g 71 -10 -3.52678 | opp_overlap 51171, overlap 51169 CCGGCGCGAAAAGAA CGTCCACGCCCTGG TTTT CCGCGGCCTGGGCG TCTTTCTCAAAGCTT Dole_0043 51701 - 54091 + | LVIVD repeat-containing protein TERM 98 54077 - 54102 + F 88 -8.2 -4.91109 | opp_overlap 54077 AAGCTTTTTCATAAA GGGTCGGCCT TTTGAC AGGCCGGGCC TTTTTCTGATAGAAG TERM 99 54168 - 54151 - f 74 -11.3 -3.05935 | overlap 54139 ACAGGGCTGACTGAA GGCGTAC TGTT GTACGCC GCACAAGGAAGCCCG Dole_0044 54260 - 54673 + | single-strand binding protein TERM 100 54754 - 54716 - T 100 -20.5 -5.0916 | CGGTGAAGATAAAAA TCGCCGGAGCGTATC GGGCCTGAT GATACGCTCCGGCGA GACGCGGTGGTGGAG TERM 101 54813 - 54781 - T 84 -13.4 -2.64803 | gap 1, overlap 54777 GGAGGGGGAAACGGA GCGCCGGG-GCGACA CACA TGCCGCACCCGGTGC GGTGATACGAGCCGG Dole_0045 55024 - 54839 - | twin arginine-targeting protein translocase TERM 102 54901 - 54911 + g 75 -4 -4.8083 | overlap 54906 CGACCTCGGCCGTGG CTTT TTT AAAG TTTTTAATGCTCTTG TERM 103 55502 - 55517 + G 70 -2.4 -4.7657 | opp_overlap 55501, overlap 55504 TTTCGCCTTAGACAC CACGGT GGCC GCCGGG TTTTTCGAGTTTTTA TERM 104 55623 - 55637 + G 85 -11.4 -4.07568 | opp_overlap 55619 55622 GGCGTGACAGACGAC CAGGGC CGT GCCCTG TTTTACGACGACCAG TERM 105 55700 - 55737 + G 89 -2.4 -5.75342 | overlap 55678 55701 55704 CAAGGCCCGGTGGCA GGCCCGCCGCCTGGCC GCCCTG GGCCGGCCGGTGATCA TTTTTTTTGACGAGC Dole_0046 55182 - 56252 + | hypothetical protein TERM 106 56338 - 56362 + F 83 -10 -4.28018 | opp_overlap 56334 GATAAAAAATGTGTA CCGGCCTGAA TGCGT TTCAAGCCGG TTTTAATACAATATT TERM 107 57081 - 57070 - g 79 -7.2 -4.6951 | AGTATTGAAAAGAAA CCGG CCAC CCGG GAGCTGATCAACTGG Dole_0047 56392 - 57237 + | ATPase central domain-containing protein TERM 108 58074 - 58089 + G 86 -5.4 -5.03314 | AAAGGCCCAGTTCAA GGAGGT CAAA ACCTTC TTTTTTCACAATACG Dole_0048 57271 - 58482 + | hypothetical protein TERM 109 58963 - 58977 + G 90 -2.8 -5.75342 | overlap 58973 GTTGCCCTGGCAAGC GGTC AACAGGG GACC TTTTTTTTCAAAGAA Dole_0049 58501 - 59181 + | response regulator receiver protein Dole_0050 59332 - 59658 + | addiction module killer protein Dole_0051 59661 - 59939 + | putative transcriptional regulator TERM 110 60403 - 60452 + G 100 -22.1 -3.18264 | overlap 60402 TTCAAGTCCATTGTT GCGCCCGGCGCCAGCCGCATGGT CTTT GCCGTGCTGCTGGTGCTGGCCGC TTCATCCATCGGCGC Dole_0052 60037 - 60615 + | hypothetical protein TERM 111 60632 - 60622 - f 79 -2.4 -5.40072 | overlap 60623 GCTTTTTGAAAAAAA GGCC CGC GTCC GGCGACACACGCAAA Dole_0053 60688 - 60942 + | hypothetical protein TERM 112 60945 - 60974 + T 71 -9.4 -3.51411 | gap 1, overlap 60942 TATTTTCGCGTAGAG CCGTTT-TTCCGG CCGGC CCGGGATAAACGG TTACTTTCCAGGGGT Dole_0054 62369 - 60975 - | DEAD/DEAH box helicase domain-containing protein TERM 113 61977 - 61991 + g 72 -9.2 -3.65529 | CGCCAGGACCAGGGC CCGGGG CGT TCCCGG TTTCCGTGCGGCTGT TERM 114 62853 - 62864 + G 95 -7.2 -5.44119 | overlap 62845 62843 AGTGGTGGCGCCGCC CCGG CGGC CCGG TTTTTTTGAAGTCCC Dole_0055 62536 - 63330 + | hypothetical protein TERM 115 63771 - 63744 - g 78 -8.4 -4.25104 | gap 1, opp_overlap 63744 63742 63733 GGTGCCGGACGAAAA GCCGACCCAGGAC CGG GTTCTGGG-CGAC TATTTTGCCGGTGTC Dole_0056 63436 - 63921 + | hypothetical protein Dole_0057 65218 - 64046 - | alanine racemase Dole_0058 65940 - 65215 - | pseudouridine synthase TERM 116 65892 - 65856 - G 75 -10.8 -3.75153 | opp_overlap 65857, overlap 65857 CTTCGGCAATGTAAA CCTCGGC-CCGGCGCCGG GAA CAGACGCCGGCGCCG-GA AAGAAATTTCTGCAG TERM 117 65891 - 65857 - G 70 -12.1 -2.84878 | opp_overlap 65857, overlap 65856 TTCGGCAATGTAAAC CTCGGC-CCGGCGCCGG GAA CAGACGCCGGCGCCG-G AAAGAAATTTCTGCA Dole_0059 67118 - 65937 - | arginine biosynthesis bifunctional protein ArgJ TERM 118 66091 - 66105 + g 70 -4.2 -4.64657 | overlap 66093 CGTTCGGCTTCGGGG CCGCAT CCC ATGCCG TTTTTCACCATTTGC TERM 119 66189 - 66135 - G 90 -6.1 -5.20216 | overlap 66137 66139 66140 CACATCATCAAAAAA GATATCCACCGCGTCCGGGGACAGG TCCAC CCCGGCCCGGCCCGCGGCGGCCATG ATCCGGCCCCAGTTG TERM 120 66187 - 66137 - G 78 -8.7 -4.22314 | overlap 66135 66139 66140 CATCATCAAAAAAGA TATCCACCGCGTCCGGGGACAGG TCCAC CCCGGCCCGGCCCGCGGCGGCCA TGATCCGGCCCCAGT TERM 121 66184 - 66140 - G 73 -12.6 -2.80583 | overlap 66139 66137 66135 CATCAAAAAAGATAT CCACCGCGTCCGGGGACAGG TCCAC CCCGGCCCGGCCCGCGGCGG CCATGATCCGGCCCC TERM 122 66462 - 66450 - G 73 -3.3 -4.72272 | GCCGGCCATTAAAAA CACCG TGT CGTTG GTGCTGGTGTCGCCG TERM 123 66820 - 66800 - G 71 -11.1 -3.28712 | overlap 66801 TGGGCGCCCCGATAA CGCCGGTGG AGG CCACCAGCA CCAGGGCCTCATCAA Dole_0060 67978 - 67250 - | vitamin B12 dependent methionine synthase activation region TERM 124 67440 - 67413 - G 77 -7.6 -4.36914 | overlap 67416 GCTGGCGCCAGAAAA TCACCCAGGGCC TGCT GTCCCTGGGCCA GGGGCCAGTCGCAGT TERM 125 67437 - 67416 - G 71 -11.5 -3.1733 | overlap 67413 GGCGCCAGAAAATCA CCCAGGGCC TGCT GTCCCTGGG CCAGGGGCCAGTCGC Dole_0061 68638 - 67985 - | cobalamin B12-binding domain-containing protein TERM 126 68441 - 68495 + g 73 -12.3 -3.14878 | gap 1, opp_overlap 68454, overlap 68439 GCGGTAGGCATCGAT GGCCAGCAGAAA-ATCGGGCAGGG CAAAAGAC CCCTGCTTGAAATTTCTCCTGGCC TGTTCAATTCCCCGG Dole_0062 69801 - 68641 - | uroporphyrinogen decarboxylase TERM 127 69151 - 69178 + g 72 -9.2 -3.69216 | gap 1, overlap 69149 CTCGACCAACACTTC GGTGATGG-TGTC GCA GGCGGCCATCACC TCTTTTGGATAGAGG TERM 128 69922 - 69878 - H 85 -10.7 -3.92324 | opp_overlap 69878 69875 TCTGTCAAGATCAAA TCCCCCGGCCCGGCAAT GACGGTTGCAA ATCGCCGGGCAGGCGGA TAATATTCAAATAAA TERM 129 70167 - 70179 + G 89 -6.2 -5.08601 | opp_overlap 70161 70162 CTTCAGAAAGCCGGC CCGG AAAGC CCGG TTTTTCTTGAAATGG TERM 130 70824 - 70844 + G 78 -4 -4.87665 | AAAGCCATCGCCTTC GGGTTTCT GGAAG ACAAACCC TTTTTCTGCCTGCCC Dole_0063 69963 - 71192 + | molybdenum cofactor synthesis domain-containing protein TERM 131 71458 - 71440 - f 74 -6.6 -4.43571 | overlap 71443 AGAAAAGTACCAAAA GAACCGCG CCC CGCGGCTT GGCCTTCGGCTTCCC TERM 132 71455 - 71443 - f 85 -10.5 -4.29953 | overlap 71440 AAAGTACCAAAAGAA CCGCG CCC CGCGG CTTGGCCTTCGGCTT TERM 133 71642 - 71674 + F 72 -10.6 -3.07043 | gap 1 CAGTCCTCTGATGGG TGCCACGGGCCAAGC GACA GCTTG-CCCGTGCCG TGTTCCCGTGCTGCC Dole_0064 72123 - 72590 + | hypothetical protein Dole_0065 73765 - 72623 - | hypothetical protein TERM 134 73719 - 73709 - G 77 -8.2 -4.3898 | overlap 73710 73711 ATCATCCTTACAAAA CGGC GGA GCCG CCACATCCGTATAAC Dole_0066 74082 - 73762 - | hypothetical protein TERM 135 74593 - 74603 + r 77 -8.2 -4.15703 | overlap 74587 GTGGGAGTACTGCAT GCCG GTG CGGC TTGTTCTTTATCGGG TERM 136 74735 - 74709 - R 100 -13.1 -4.65933 | gap 1 GACGCTCAAAACAAA CACGGG-CAAGC TATC GCTTGGCCCGTG GCACCCATGAACATT TERM 137 74979 - 74925 - R 100 -21.4 -3.10908 | AAAGCGAGCAGGTAA TGTAGGGGCGGCCGGCGGCCGCCC GACTGAT GGGCAACCGCGGGTTGCCCCTACA AAAACGCCGCAGGCG TERM 138 74994 - 74984 - R 88 -8.2 -4.82901 | TTGCCCCTACAAAAA CGCC GCA GGCG GGCGAGTTCATTTTC TERM 139 75055 - 75038 - R 90 -12.7 -3.76224 | CTTCGAGCGAGGAAA GCCACGC CTGT GCGTGGC CAAGCCGCGGGGCGC TERM 140 75057 - 75075 + r 74 -6.6 -4.43571 | overlap 75060 CGCCTGTGCGTGGCC AAGCCGCG GGG CGCGGTTC TTTTGGTACTTTTCT TERM 141 75060 - 75072 + r 85 -10.5 -4.29953 | overlap 75057 CTGTGCGTGGCCAAG CCGCG GGG CGCGG TTCTTTTGGTACTTT TERM 142 75293 - 75264 - R 100 -14.4 -4.65933 | gap 1, opp_overlap 75267, overlap 75251 GACGTTTAAAATAAA CACGGGC-AAGGC TTTGC GCCTTTGCCCGTG ACACCCGTCAAAAAA Dole_0067 75825 - 75364 - | cyclic nucleotide-binding protein TERM 143 75593 - 75572 - G 74 -2.1 -5.00884 | opp_overlap 75581, overlap 75574 ATCTCGCCGAAAAAA TCTCCGGGC GCAA GCCGGGCAA TGGGCCGGCACTGCT TERM 144 75664 - 75652 - G 100 -7.7 -5.33785 | opp_overlap 75659 AAGCAGGATAAAAAA GGATG TGT CATCC CGGTCTCCGTCCCGA Dole_0068 77306 - 75864 - | tRNA(Ile)-lysidine synthetase TERM 145 76627 - 76598 - G 79 -7.1 -4.56775 | gap 1, opp_overlap 76620 76625 ACTCTTCGCGAAAAA TTTCGGCG-ACCCG GTT CAGGCACGCCGCAA TCCCGGGATTGTAGT TERM 146 77268 - 77278 + g 88 -5.4 -5.24129 | opp_overlap 77258 ACAAACCGCGTCAAG CAGA GGG TCTG TTTTTTCTAACCAGC Dole_0069 77706 - 78359 + | GrpE protein TERM 147 78907 - 78884 - g 75 -10.2 -3.75933 | overlap 78887 78898 AGACAGGCCACCAAA GACGCCGGCA AAAT CGCCGGCCTC AACGTGCTGCGCATT TERM 148 79163 - 79142 - g 78 -2.9 -5.16572 | gap 1, overlap 79145 AGCGAATTCAAAAAA GAC-CAGGGC ATT GACCTGCGCC AGGACAAGATGGCGC Dole_0070 78419 - 80347 + | chaperone protein DnaK TERM 149 80399 - 80359 - f 73 -9.6 -3.40173 | opp_overlap 80363, overlap 80357 80360 ATAAACCTTTAAACA CCCGCCCCGCCTGCAAAG AGACG CTTTGCAGGCGGGGTTTT TTTATGAGGAGGCGC TERM 150 80398 - 80360 - f 81 -13.1 -2.63381 | opp_overlap 80363, overlap 80359 80357 TAAACCTTTAAACAC CCGCCCCGCCTGCAAAG AGACG CTTTGCAGGCGGGGTTT TTTTATGAGGAGGCG TERM 151 80363 - 80395 + F 100 -23.6 -5.60993 | opp_overlap 80360 80359 80357 ACCTTTAAACACCCG CCCCGCCTGCAAAG AGACG CTTTGCAGGCGGGG TTTTTTTATGAGGAG Dole_0071 80417 - 80896 + | NADPH-dependent FMN reductase Dole_0072 81455 - 80934 - | hypothetical protein TERM 152 81547 - 81520 - R 85 -10.6 -4.07568 | gap 1, opp_overlap 81540 GCGGTTCGGTCAAAA CACCCTG-GCGCA GAG TTCGCCCAGGGTG CCCAGGTTTCGGCAC Dole_0073 82383 - 81514 - | succinyl-CoA synthetase, alpha subunit Dole_0074 83597 - 82431 - | succinyl-CoA synthetase, beta subunit Dole_0075 85642 - 83597 - | hypothetical protein TERM 153 84281 - 84295 + g 81 -2.8 -5.2166 | overlap 84277 84283 ATCCTCATCCACGGC CAGATC GCC GATCTC TTTTTTGGATTCTTC Dole_0076 85911 - 85681 - | hypothetical protein Dole_0077 87483 - 85930 - | carboxyl transferase TERM 154 86800 - 86813 + g 75 -5.9 -4.58466 | opp_overlap 86800, overlap 86795 GTTTTCGCAGGCAAA GTGGG CCAC CCCGC TTTTCTCGTTGTGGG TERM 155 87429 - 87441 + g 76 -3.3 -5.00138 | TGCCGCCCATCTCCC GAACG GCG CGCTC TTTTTCCTTTAACTC Dole_0078 88601 - 87606 - | LAO/AO transport system ATPase TERM 156 87664 - 87636 - G 75 -5.2 -4.66537 | gap 1, opp_overlap 87636 87638 CTTGTCAAGATAAAA CAGCAGCTTGTCG GCCC CGGCA-GCGGCTG TGATCTCGCCGTGCT TERM 157 88472 - 88510 + g 81 -13.1 -3.53444 | gap 1 CAAGCAGCTCCCCCA GC-ACCTGGCCGGCCACC TTCC GGTGTTCGGCCAGGCCGC TTTCCACCAGGGTGA TERM 158 88740 - 88752 + r 100 -6.9 -5.57888 | CCCTTTTCCGTCGTG GGCTC TGC GGGCC TTTTATTTTTTTCAT Dole_0079 90897 - 88777 - | methylmalonyl-CoA mutase Dole_0080 91348 - 90941 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 159 91048 - 91058 + g 83 -8.2 -4.62054 | GGATTTCGTCGATCA GGGC AAC GCCC TTTTCCTTTAATTCA TERM 160 91409 - 91436 + r 100 -11.2 -4.79223 | gap 1, overlap 91411 GTGTCGTGCTTCGGC CATGG-CCCGGGC AAA GCCCGGGGCCGCG TTTTTGATGGTGTCG Dole_0081 92572 - 91385 - | aspartate aminotransferase TERM 161 91831 - 91814 - G 72 -9.1 -3.87815 | GTTGACTGCCACAAA CCCGATG CGCT CACCGGG CAGTGACAGGGTTTT TERM 162 91961 - 91974 + g 83 -5.2 -5.00616 | CAGGTAAATGGGGCG GCCG TGCTCC CGGC TTTTTTCAGACAGCA TERM 163 92060 - 92070 + g 85 -2.4 -5.64274 | GGGTGAATTGATGAT CACG GCC CGGG TTTTTTTATCCATGG TERM 164 92201 - 92190 - G 95 -7.2 -5.626 | TACTCCACAAAAAAA GGGG CCAG CCCC ACCACAATGTCGCCG TERM 165 92385 - 92411 + g 70 -4.3 -4.59853 | gap 1, overlap 92385 CCGTGTCCGGTGTCC GG-GCCGGCCGA CACA TCGGCCAGAACC TTTTTAAACCGTTCC Dole_0082 92860 - 93045 + | hypothetical protein TERM 166 93505 - 93550 + G 72 -6.2 -4.32857 | gap 2, opp_overlap 93494 AAAAGGCGTGATATG CCGC-TGCATGGTC-AAGGC CTCGGGCC GCCTTCGGCCGGGCACGCGG TTTCTCTTTGAAGAC TERM 167 93988 - 93958 - g 86 -14.7 -3.18264 | gap 1 GGCGGCAGCCATCAA CGCCACCCGG-CGC GACG GCGGCCGGGTGGTG GCTGTCGGCACCACG Dole_0083 93215 - 94264 + | queuosine biosynthesis protein Dole_0084 94358 - 95512 + | queuine tRNA-ribosyltransferase Dole_0085 95607 - 95825 + | NifU domain-containing protein TERM 168 95947 - 95965 + F 76 -8.8 -4.13014 | overlap 95943 95948 AACCAGATTTGTCAG CCGCCTGA TGT TCAGGCGA TTTTGAAAATATCAC TERM 169 95948 - 95964 + F 81 -12.3 -3.07487 | overlap 95943 95947 ACCAGATTTGTCAGC CGCCTGA TGT TCAGGCG ATTTTGAAAATATCA TERM 170 96226 - 96206 - g 84 -2.5 -5.42862 | overlap 96207 96225 ACAGGGCCAAAAAAA TCCTGGTCT TTA AAACCAAGC GACGGAAACGGTATC Dole_0086 95992 - 96306 + | ribosomal protein L21 TERM 171 96434 - 96403 - g 78 -6.5 -4.59773 | gap 2, overlap 96387 96386 96404 96405 CGGCAGCTCGAAAAA CGGCCGCGACAGCAG GGGC CAGC-GCCGCGG-CG TAAAGCGGTTCGGCG Dole_0087 96368 - 96619 + | 50S ribosomal protein L27 TERM 172 96853 - 96805 - g 74 -2.2 -5.00616 | gap 1, overlap 96807 96808 96851 TTTCGTTCCAAAAAA CAGTTTGCCGC-GCCCAACGGCG CGCC CGGCGAAGGCCGGCAGAAAACCG GCAAGTCCGGCGACG TERM 173 96863 - 96851 - g 72 -6.2 -4.37658 | overlap 96805 96853 AAGGCCGGCAGAAAA CCGG CAAGT CCGG CGACGATCTTGTCAT Dole_0088 96616 - 97617 + | GTP-binding protein Obg/CgtA Dole_0089 97607 - 98737 + | glutamate 5-kinase TERM 174 98883 - 98864 - g 100 -9.2 -5.20333 | CACGGACAAGAAAAA CCAGGCCC TGCT GGCCCTGG CCGACCGGCTCCATA TERM 175 98945 - 98934 - g 95 -3.6 -5.79595 | opp_overlap 98943 GCGGAAAACAAAAAA GACC TGGA GGCC GCGAAAGCGACGGGG TERM 176 99083 - 99070 - g 78 -9.5 -4.07568 | CGGTGGGCGCCAAAA GCGCC ACCT GGCGC CGGCCCAACGGCCTG TERM 177 99564 - 99593 + G 80 -9.9 -4.17556 | AATGCCATGGAGACT CTGCTGGTCCACA GGGA TGCGGCCCAGCGG TTTCTTCCGGATATG Dole_0090 98775 - 100031 + | gamma-glutamyl phosphate reductase TERM 178 100310 - 100345 + G 70 -3.9 -4.5954 | overlap 100285 100313 CGCTGAGATGGTCCA GACCGGACCGTGCTA CACCAT TGACACGGTCCGTTA TTTTATATCCTCTGA TERM 179 100313 - 100342 + G 85 -10 -4.39748 | overlap 100285 100310 TGAGATGGTCCAGAC CGGACCGTGCTA CACCAT TGACACGGTCCG TTATTTTATATCCTC Dole_0091 100059 - 100727 + | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 180 100932 - 100910 - g 74 -6.9 -4.39386 | GTCAAAGCACTAAAA GACCAGGGC ATCAA GCCCCTGTC CATGGAGGGCGTCTC Dole_0092 100724 - 101068 + | iojap-like protein Dole_0093 101094 - 102629 + | phosphoglyceromutase TERM 181 102774 - 102761 - f 88 -2.5 -5.82281 | AAACACAGAAAAAAA TATTT CTAA AAATA GCCTTTTTGTTTATA TERM 182 103556 - 103538 - g 78 -3 -5.15969 | overlap 103540 GTGGAACTGAAAAAA GGGCCCAT GTG ATCGGCGC CAATCTGGAATATAT TERM 183 103916 - 103897 - g 74 -2.1 -4.94243 | CGAAAAAAATTAAAA GACATGC TGGAAC GGATGTC CATATTAACGACTGA Dole_0094 103072 - 104205 + | DNA polymerase III, beta subunit TERM 184 104684 - 104673 - g 75 -5.8 -4.63007 | CAGAAGGACAGAAAA CCAG CGAA CTGG AGATTATAGGCGATA TERM 185 104783 - 104803 + G 86 -9 -4.65895 | TTTGATATTCTGACC CGCCGGTT GAGAG AACTGGCG TTTTTAAATAACGGG TERM 186 105222 - 105208 - g 84 -4.2 -5.24129 | CGTGCGTATAAAAAA CCCCCA GTT TGAAGG ACAGACCAAAACCAA TERM 187 105358 - 105343 - g 100 -8.2 -5.33785 | overlap 105354 AATCATTATAAAAAA GGCCAC AGAA GCGGCC AGGGCCAGAAATGCG Dole_0095 104210 - 106654 + | DNA gyrase, B subunit Dole_0096 107988 - 106651 - | asparaginyl-tRNA synthetase TERM 188 107025 - 107007 - G 75 -5.2 -4.56597 | overlap 106992 CCGGTTTCTTAAAAA CGGTCTCC GTC AGATACCG CTCGTGTTCTGTCTG TERM 189 107208 - 107193 - G 77 -2.4 -5.055 | CGAACCGGGAAAAAA GGTCCA TGTC CGGCCC GCAGTTTTCAACCAT TERM 190 107590 - 107570 - G 71 -6.8 -4.19953 | GAGTGAATGGCAAAA CCCGCTTC TGACC GAAGCCGG AACAGGGCGCTGTAC TERM 191 108465 - 108501 + G 95 -7.1 -5.40474 | gap 1, overlap 108466 CCCTGGTGATTGCCG GCGGCC-CCTGCACCG TGAACC CGGAGCCGGTGGCCGA TTTTTTTGACGCCAT TERM 192 108466 - 108500 + G 77 -10.6 -3.83561 | gap 1, overlap 108465 CCTGGTGATTGCCGG CGGCC-CCTGCACCG TGAACC CGGAGCCGGTGGCCG ATTTTTTTGACGCCA TERM 193 109515 - 109529 + G 78 -6.4 -4.56597 | opp_overlap 109515 109516 AGCACCCGGAAACAA GCCTTT TGG AAGGGC TTTTTGCCAGGGGAG TERM 194 109576 - 109594 + G 71 -10.2 -3.55444 | CCTGATTGAAGCGGC CTGGCGCC GGG GGTGCCGG TTTGACGGGTGGAGC Dole_0097 108032 - 110485 + | radical SAM domain-containing protein TERM 195 110545 - 110517 - f 77 -6.6 -4.56597 | gap 1, overlap 110519 CCGCGGCCTTAAAAA GCGGTGCC-GGTC CTTC GCCCAGGGACCGC ACGTGAGGGCCGGCC TERM 196 111857 - 111883 + G 79 -5.7 -4.72272 | overlap 111860 GCGGACCCGCAACTC CGTGGCCCGCA TGCTC TGCGAGCCCTG TTTTTACTGCAACGG TERM 197 111920 - 111932 + G 71 -7.7 -4.00532 | ATATCTCCTCTCCCG GCAGA CCA TCTGC TTTAATATTTACCGC Dole_0098 110589 - 112142 + | ribonuclease Dole_0099 112349 - 112483 + | ribosomal protein L34 TERM 198 112623 - 112605 - f 71 -4.5 -4.52589 | opp_overlap 112606, overlap 112584 GGTGTCGAGACAAAA CACCCCA GGGGA TGGTGTG ACAGCTTTTTCATTT TERM 199 112667 - 112648 - g 70 -4.2 -4.64763 | overlap 112650 TCATTTAAAAAAGAA GACCGCCT GTTA AAGCGGTA CGAATTTATCGAAAT TERM 200 112798 - 112782 - g 76 -3.5 -5.0133 | CACGGTTTCAAAAAA GGTCGGC AAA GCGGCCC GGCGAAACAGGATCA TERM 201 112906 - 112942 + G 86 -8.7 -4.59511 | gap 1, opp_overlap 112898 112906 AAAAAGGCGGTAAAC GCTTCTCCGGCGGAGC TGGAGC GCTCC-CTGGCGGAGC TTTTTCACAAGTCTT Dole_0100 112621 - 112986 + | ribonuclease P protein component Dole_0101 112986 - 113180 + | hypothetical protein TERM 202 113285 - 113255 - f 76 -8.2 -4.03888 | opp_overlap 113274 113276, overlap 113271 113273 TATTGACAACAACAA CACGGAACGCGG AAGACAG CCGCCTGCCGTG ATCATGCGGGCTGCG TERM 203 114361 - 114375 + G 89 -4.2 -5.50313 | CACGCTCTTGACCGG GCCG TCAACTT CGGC TTTTTTGATTTTATC TERM 204 114753 - 114771 + G 71 -10.2 -3.48629 | opp_overlap 114750 114753, overlap 114762 CGGGTGGATAAACGA CCTGTCCG CGC CGGACCGG CTTTTTAACTTTGAT TERM 205 114762 - 114772 + G 87 -8.2 -4.82855 | opp_overlap 114753 114750, overlap 114753 AAACGACCTGTCCGC GCCG GAC CGGC TTTTTAACTTTGATG Dole_0102 113359 - 115038 + | 60 kDa inner membrane insertion protein TERM 206 115443 - 115407 - g 86 -5.7 -5.0538 | overlap 115408 115428 GCTGAGTCGAAAAAA GCGCCCAGGGCCAAA CCCAAAT CCCGGCCCCGGACGG AAAAAGGGGCTCCTG TERM 207 115462 - 115449 - g 87 -9.5 -4.65895 | CCCCGGACGGAAAAA GGGGC TCCT GCCCC GGCTGAACGGTCAAG TERM 208 115684 - 115702 + G 78 -6.6 -4.65895 | overlap 115685 CGGTGAAAGTGGCGT TCGAGCCG GGC CGGGTCGG TTTTTCCATGGAGGG Dole_0103 115053 - 116078 + | single-stranded nucleic acid binding R3H domain-containing protein TERM 209 116563 - 116551 - g 75 -10.5 -3.68827 | TATTGAGCAGGTAAA GGCCG CGG CGGCC CAGGTGTCCGGTGAA TERM 210 117260 - 117229 - g 72 -4.4 -4.6856 | gap 1, overlap 117218 117256 TAAAGAGCTTAAAAA CCTCCTGGTCCGC ATGGTTG GCGAAC-AGGCGG TGCCGGCGAGCGGCC Dole_0104 116099 - 117487 + | tRNA modification GTPase TrmE TERM 211 117495 - 117541 + F 100 -25.5 -3.57651 | gap 1, opp_overlap 117487 117495 GCAAATAGGCGAAGA CTCTG-CCGGCTCGAATGTTTC ACGT GAAACATTCGAGCCGGGCAGGG TTGTGTAATATCGGA TERM 212 117541 - 117495 - f 100 -23.3 -3.11218 | gap 1, opp_overlap 117495, overlap 117487 GCAAATAGGCGAAGA CTCTG-CCGGCTCGAATGTTTC ACGT GAAACATTCGAGCCGGGCAGGG TTGTGTAATATCGGA TERM 213 117896 - 117883 - g 80 -2.3 -5.1925 | overlap 117884 TTACAAGTTAAAAAA GCAGG CCTA CCTGG ACCACGAACAAGGCA Dole_0105 117620 - 118303 + | hypothetical protein Dole_0106 118300 - 118668 + | hypothetical protein TERM 214 119215 - 119171 - g 70 -3.7 -4.63218 | gap 3, overlap 119174 CCGTGCGCAAGAAAA GAGGCGG-CGGAC-AAT-GTGG CCCT CAACGATTTGTCCGACCGCATC GTGGTGTCCGACAGG Dole_0107 118655 - 119527 + | ribosomal L11 methyltransferase TERM 215 119593 - 119577 - g 86 -3.5 -5.60993 | overlap 119578 GCTGGCAGAAAAAAA GCCCCGG TGC CCGGCGT GCGGGCAGGAGATGG Dole_0108 119524 - 120198 + | hypothetical protein TERM 216 120263 - 120219 - T 100 -17.9 -5.56264 | opp_overlap 120223, overlap 120221 120222 120223 GGCAAATAGAAAAAA GAGCCCCGGTATTCCGGCATG TCT CACGCCGGAATACCGGGTTTT TTATGCGAAAAAGGC TERM 217 120261 - 120221 - T 100 -20.5 -4.40478 | opp_overlap 120223, overlap 120219 120222 120223 CAAATAGAAAAAAGA GCCCCGGTATTCCGGCATG TCT CACGCCGGAATACCGGGTT TTTTATGCGAAAAAG TERM 218 120260 - 120222 - T 100 -24 -3.21847 | opp_overlap 120223, overlap 120221 120219 120223 AAATAGAAAAAAGAG CCCCGGTATTCCGGCATG TCT CACGCCGGAATACCGGGT TTTTTATGCGAAAAA TERM 219 120223 - 120259 + T 100 -25.3 -5.24129 | opp_overlap 120222 120221 120219 120223 AATAGAAAAAAGAGC CCCGGTATTCCGGCATG TCT CACGCCGGAATACCGGG TTTTTTATGCGAAAA TERM 220 120259 - 120223 - T 100 -27.5 -2.50668 | opp_overlap 120223, overlap 120222 120221 120219 AATAGAAAAAAGAGC CCCGGTATTCCGGCATG TCT CACGCCGGAATACCGGG TTTTTTATGCGAAAA Dole_0109 121034 - 120309 - | hypothetical protein TERM 221 121130 - 121118 - H 75 -5.5 -4.74285 | AGGCAGAACAGAAAA GCACA ACG CGTGC CAGAGACAATAAAAT TERM 222 121272 - 121248 - H 100 -10.9 -4.66938 | overlap 121249 AGTCGCAAGACAAAA CCGTAACATAA ATT TTATGTTACGA TATGCACCGGGGGCA TERM 223 121271 - 121249 - H 85 -12.2 -3.3944 | overlap 121248 GTCGCAAGACAAAAC CGTAACATAA ATT TTATGTTACG ATATGCACCGGGGGC Dole_0110 121442 - 121936 + | hypothetical protein TERM 224 122350 - 122338 - g 76 -3.3 -4.88736 | opp_overlap 122338, overlap 122340 GATCACCGACAAAAA GGCGT TGA AGGCC TATGTGGACCGCAAC TERM 225 122459 - 122472 + G 75 -9.5 -3.86524 | GCCTACTGGCGCCAG GCCCC GGAC GGGGC TTTCTGCAACAATGT Dole_0111 121952 - 122761 + | RimK domain-containing protein ATP-grasp TERM 226 122900 - 122885 - T 77 -10.4 -3.54424 | opp_overlap 122884 CTTGATCTTGCGAAA TCCCGC CATG GCGGGA CTGGATTGGAAACCT TERM 227 123002 - 123018 + T 75 -3.5 -5.0133 | opp_overlap 123002 GGTTTTTATGAAGAA GGGGAGG TTC CGGCCCC TTTTTTCAGGGCATC Dole_0112 124710 - 122992 - | AMP-dependent synthetase and ligase TERM 228 123177 - 123166 - G 71 -7.2 -4.15044 | opp_overlap 123139, overlap 123167 CTGGCCGGCAAGAAA GGCC TGCA GGCC GGCGGGCGTCACACT TERM 229 123297 - 123322 + g 78 -8.3 -4.41844 | gap 1, overlap 123313 GGTGCTTCATGATCA CGTGCTCCACCT CGT AGGCGGA-CACG TTTTCTCCGCCTTTT TERM 230 123313 - 123333 + g 71 -6.8 -4.14243 | overlap 123297 GTGCTCCACCTCGTA GGCGGACA CGTTT TCTCCGCC TTTTCGCATGGACTC TERM 231 123439 - 123451 + g 76 -3.3 -4.93296 | overlap 123437 TTTCACTTTTTTTTC CGACG CGG CCTCG TTTTTGTAATACTCC TERM 232 123982 - 123972 - G 85 -3.2 -5.40072 | opp_overlap 123978, overlap 123975 CGGGCTTTAAAAAAA GATG GCC CACC AGCCGCAGCCGGGTG Dole_0113 126148 - 124751 - | Propanoyl-CoA C-acyltransferase TERM 233 125442 - 125453 + g 70 -2.2 -4.82667 | overlap 125440 GCCAGCTGCTCCACG GTGC TGCC GTAC TTTTTCATGTGCTGC TERM 234 126257 - 126245 - H 75 -3.4 -5.06414 | GGGCCGCAACAAAAA TTGG ATAAA CCAA TTAACCTCATAAGTG TERM 235 126512 - 126495 - H 93 -4.7 -5.60993 | overlap 126497 GCCTGCACAAAAAAA CCGCGCC CGGC GCCACGG AACCTGTTGTGTGAA TERM 236 126695 - 126660 - g 100 -13.2 -4.41616 | opp_overlap 126660 126677 ATCTTTTCAAATAAA CTCGCTCCCGGCGACA AGCT TGCCGCCGAGCGGGAG CTTTCCAAAAAAATG Dole_0114 126600 - 127382 + | regulatory protein GntR HTH TERM 237 127581 - 127524 - g 77 -11.8 -3.51232 | gap 2, opp_overlap 127555 127556, overlap 127521 127556 CGTTGCCGAAATCAA CGCGGAGCGGGCCGCCGAGTCGGCCGAA CTGA TCCGGCAGGC-CGGGGGCCGGC-CCGTG GAAATTCTCTGCGAT TERM 238 128010 - 128033 + G 76 -3 -5.0133 | gap 1 TACATCCCCGGACGA GCGCCAGCGCA AAA TG-GCGGCCGC TTTTTTCAAAAAATC Dole_0115 127402 - 128238 + | short-chain dehydrogenase/reductase SDR Dole_0116 128291 - 129049 + | nitroreductase Dole_0117 129053 - 129430 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 239 129963 - 129940 - g 75 -5.9 -4.65895 | TGCTGGATGCAAAAA CCCGGTACG TAACCG CGGACCAGG CCAGGGCCCTGCCGG TERM 240 130034 - 130044 + G 70 -2.4 -4.79955 | overlap 130027 CGAGAAGCTTTCCCG CGAC ACG GCCG TTTTGTTCTGGCTCT Dole_0118 129618 - 130499 + | hypothetical protein TERM 241 130772 - 130782 + G 74 -2.4 -5.00616 | ACGAACTGCTTGACC GGGC CAT GGCC TTTTTTCAAGCGCGC Dole_0119 130561 - 131370 + | GCN5-related N-acetyltransferase TERM 242 131637 - 131661 + F 88 -8.6 -4.70879 | overlap 131640 AAACGGCAAAATTTT TAAGGCGTAC GATAA GTACGCCATA TTTTTGCACTTTACG TERM 243 131640 - 131658 + F 72 -10.3 -2.96839 | overlap 131637 CGGCAAAATTTTTAA GGCGTAC GATAA GTACGCC ATATTTTTGCACTTT TERM 244 132234 - 132211 - g 74 -2.3 -5.00616 | overlap 132229 CGTGTTTTCAAAAAA GCCCTATCG CTGGAT CAACGGGGC GCCGGCCGCCGTGGA Dole_0120 131723 - 132865 + | carbamoyl-phosphate synthase, small subunit TERM 245 133242 - 133232 - g 76 -4.6 -4.72272 | opp_overlap 133238, overlap 133234 TTCCGCCATCAAAAA GGCC GAG GACC GGGACCTGTTCCGAA TERM 246 133782 - 133805 + G 84 -13.2 -3.66178 | gap 1 GTGTCGCGCAGCTCG GCCC-TGGCCT CCA AGGCCACGGGC TTTCCCATTGCCAAG TERM 247 134179 - 134191 + G 74 -7.7 -4.19238 | TCTACCTTCGGTATG CCCTT CAG AAGGG TTTTACCATTGACGA TERM 248 135773 - 135791 + G 93 -11.6 -4.56597 | overlap 135775 GTTTGAGATCGTGGC CACCGCCG GTA CGGCGGCG TTTTTAAAAGAGCAG TERM 249 135775 - 135789 + G 71 -12.8 -2.60032 | overlap 135773 TTGAGATCGTGGCCA CCGCCG GTA CGGCGG CGTTTTTAAAAGAGC Dole_0121 132858 - 136085 + | carbamoyl-phosphate synthase, large subunit TERM 250 136813 - 136803 - g 70 -2.4 -4.77567 | opp_overlap 136803 ACCCCCACAAGAAAA GCCC CCG GGCC TTCTGCATCTTCGAG Dole_0122 136082 - 137485 + | amidophosphoribosyltransferase TERM 251 137749 - 137730 - T 71 -6.5 -4.16943 | opp_overlap 137734 TTTGATATGTTAAAA CAAACCA TTAGCG TGGTTTG ACCCCCCGTATTACC Dole_0123 138916 - 137939 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 252 139005 - 139026 + r 100 -4.6 -5.9362 | opp_overlap 139005 TGTACAAAAATATAA TTTGAAAT TTTTTT ATTTCAAA TTTTTTTCTATTTTA Dole_0124 139463 - 139017 - | MarR family transcriptional regulator TERM 253 140633 - 140620 - g 79 -5.2 -4.72272 | CTGGCCGATGAAAAA GGGC TGTTGG GCCC CCGCTGGACCATCGA Dole_0125 139717 - 140736 + | hypothetical protein TERM 254 141273 - 141286 + G 83 -8.1 -4.58685 | AAAGAACGACCGCAA CACCG CCCC CGGTG TTTTTGAAGCCATTT TERM 255 141503 - 141519 + G 80 -10.8 -4.08767 | opp_overlap 141499 GTTTTGATGAACTGG CGGCCG CGGCC CGGCCG TTTTCACCGGATAAA TERM 256 142109 - 142064 - g 74 -2.5 -5.00616 | gap 1, opp_overlap 142068 142074 142075 142095, overlap 142065 142066 142068 142095 GCTGTTTTGAAAAAA CCCAGCTCAATCGGGCT-TATC TTC GAAACAGCCCGGTTATGCTGCA GGACCAGGTCATTGA TERM 257 142294 - 142278 - g 78 -9.4 -4.07568 | CGCTCTGCGGCAAAA CCCGGA TGGCC TCCGGG CGGCTCCACTTGCAT TERM 258 142636 - 142625 - g 90 -7.2 -5.06414 | overlap 142626 142627 GGGTCCGAATAAAAA CGCC CCGG GGCG AGGTCCGCATGAAGG Dole_0126 140761 - 142818 + | formate dehydrogenase Dole_0127 143290 - 143562 + | hypothetical protein TERM 259 143710 - 143720 + G 80 -2.4 -5.18726 | overlap 143687 CGTTTTCCAAAACCG GGCG CCT CACC TTTTTCTTCTGCCGG Dole_0128 143604 - 144326 + | 1-acylglycerol-3-phosphate O-acyltransferase Dole_0129 144424 - 145266 + | pyrroline-5-carboxylate reductase TERM 260 145423 - 145387 - g 100 -14.3 -4.07568 | opp_overlap 145387 145389 GCTGTCGCTGGAAAA CCTGACCCAGGCCCCGG ACG CCGAGGTCCGTGCCAGG GTCATTTTTTCCACC TERM 261 145389 - 145427 + G 100 -11 -5.03145 | gap 1, opp_overlap 145387, overlap 145387 TGTCGCTGGAAAACC TGACCCAGGCCCCGGAC GCCGAG GTCCGTG-CCAGGGTCA TTTTTTCCACCATTG TERM 262 145482 - 145492 + G 70 -2.4 -4.72272 | overlap 145477 TCTTTATCCTGCTGG GGGC CTC GGCC TTTTTCCTGGGCAGC TERM 263 145654 - 145676 + G 70 -4 -4.56775 | overlap 145627 145628 145655 CTCCATGAGCCTGGC CGGCGCCT TTTTAGT GGGCGCCC TTTTTGCCGCCGGCT Dole_0130 145259 - 145945 + | cytochrome c biogenesis protein transmembrane region TERM 264 146231 - 146249 + G 72 -4.6 -4.57073 | opp_overlap 146235, overlap 146232 GGGCCAAAGCGCAGC AGAAGAAA GTG TTTCTTCA TTTTTACACCAACTG Dole_0131 146077 - 146526 + | thioredoxin domain-containing protein TERM 265 146570 - 146594 + G 72 -9.2 -3.72576 | gap 1, opp_overlap 146558, overlap 146571 AAAGGTGATGACCTC GGCCGTGGGCC CCCC GGCCC-CGGCG TTTGATCACCAGGCC TERM 266 146571 - 146593 + G 73 -12.7 -2.83403 | gap 1, opp_overlap 146558, overlap 146570 AAGGTGATGACCTCG GCCGTGGGCC CCCC GGCCC-CGGC GTTTGATCACCAGGC Dole_0132 146529 - 147116 + | NUDIX hydrolase Dole_0133 147398 - 147111 - | hypothetical protein Dole_0134 147877 - 147419 - | GCN5-related N-acetyltransferase Dole_0135 150051 - 148111 - | 1A family penicillin-binding protein TERM 267 148227 - 148259 + g 77 -2.5 -5.09225 | opp_overlap 148234 148235 CCATGCCGTCGGGCA CATCAAACCCCTGGC AGG GCCGGGTGTCAAATG TTTTTTCCATAAACT TERM 268 149226 - 149236 + g 74 -8.2 -4.13014 | overlap 149220 GGTATAACTGCTGTA CGCC CAC GGCG TTTTCAAGGTCTCCG TERM 269 149340 - 149359 + g 100 -3.5 -5.90981 | CAGCCTGGTGGTATT CGGCC TCGGAGATCT GGCCG TTTTTTTTCATCTGG TERM 270 149992 - 149982 - G 100 -8.2 -5.78622 | overlap 149983 149984 CCACGGCAAAAAAAA CGCC GCC GGCG GTGCCGGCAAGAACC Dole_0136 150159 - 150455 + | hypothetical protein TERM 271 150765 - 150736 - g 100 -16.3 -4.57341 | opp_overlap 150757 150761 AAGTTCTGGCAAAAA CCCCGGACGAGGC AGTG GCCGCGGCCGGGG AACTGGGCTATCCCG Dole_0137 150540 - 151301 + | ATP-grasp domain-containing protein TERM 272 151514 - 151495 - g 76 -2.8 -4.87291 | gap 1, opp_overlap 151495, overlap 151497 CATCTCAAGGAAAAA GAGGTGCAG GGC CTG-ACCGC CTTTGACAGTGTTGA TERM 273 152083 - 152097 + G 73 -12.8 -2.71712 | opp_overlap 152082 152081, overlap 152082 GGCGGATCGGAAACC GGCCGC AAG GCGGCC CTTTCCCACACCGGG Dole_0138 151327 - 152805 + | CoA-binding domain-containing protein Dole_0139 152951 - 153283 + | Hpt protein Dole_0140 153335 - 154450 + | response regulator receiver protein Dole_0141 154594 - 155076 + | putative anti-sigma regulatory factor, serine/threonine protein kinase TERM 274 155757 - 155769 + G 84 -6.9 -4.79756 | overlap 155751 AGATTGCCACCGCGC CCCTG CTG CGGGG TTTTTCCCTTCTGTC TERM 275 156075 - 156062 - g 83 -9.5 -4.2704 | opp_overlap 156064 TGGACCATTAAGAAA GGGGC ACTA GCCCC GGAGGCGGCCGGTAC Dole_0142 155249 - 156262 + | hypothetical protein Dole_0143 156282 - 157124 + | amidohydrolase 2 TERM 276 157295 - 157254 - T 100 -22.5 -3.14962 | opp_overlap 157255 157260, overlap 157260 GCATCAGGAAAAGGA CCAAAAGAAGGCGTCCCGC ATGA ACGGGACGCCTTCTTTTGT TTGGGTAAAACCTGT TERM 277 157255 - 157294 + T 100 -25.3 -3.6502 | opp_overlap 157254 157260, overlap 157260 CATCAGGAAAAGGAC CAAAAGAAGGCGTCCCG CATGAA CGGGACGCCTTCTTTTG TTTGGGTAAAACCTG TERM 278 157289 - 157260 - T 100 -20.1 -4.42667 | opp_overlap 157255 157260, overlap 157254 GGAAAAGGACCAAAA GAAGGCGTCCCGC ATGA ACGGGACGCCTTC TTTTGTTTGGGTAAA TERM 279 157260 - 157289 + T 100 -19.4 -4.90778 | opp_overlap 157260 157254, overlap 157255 GGAAAAGGACCAAAA GAAGGCGTCCCG CATGAA CGGGACGCCTTC TTTTGTTTGGGTAAA Dole_0144 158896 - 157358 - | hypothetical protein TERM 280 158664 - 158644 - G 100 -14.7 -3.81488 | TGCCGGTAAAGATAA GCACCGGCG TTC CACCGGTGC GAAACTGCGGCTTGC TERM 281 159073 - 159033 - R 77 -2.6 -5.22104 | opp_overlap 159042 159048 159058 159059, overlap 159035 GAAAAAAGAATAAAA GC-CGGCCAGCATCATTAAC GAT GTTATTG-TACCGGCCCTGC TGGTTCAAATTTCAC TERM 282 159150 - 159169 + r 81 -12.1 -3.03007 | overlap 159139 CCTTCACCGGTGCCG CCGGGGC CAGAAC GCCCCGG TGTTCCGGCAGTATT Dole_0145 159731 - 159138 - | hypothetical protein TERM 283 159371 - 159387 + g 72 -5.1 -4.56597 | overlap 159366 159372 159377 TGCGGTATATGCCTT TGAACAG GGC CTGTTCC TTTTTGGGACGCAGG TERM 284 159729 - 159711 - G 90 -3.1 -5.75478 | overlap 159713 AATCAGAGAAAAAAA GTTGATC CAGGC GATCATC ATAAAGCCTCTTGTC Dole_0146 160650 - 159793 - | hypothetical protein Dole_0147 161135 - 160632 - | hypothetical protein TERM 285 160672 - 160698 + g 83 -15.2 -2.72991 | opp_overlap 160663 160664 160679, overlap 160674 TTAAAAGCCGCCTGA TAGCACAGGCGC GAG GCGCCTCTGCTA TCGTTCACGGTGTGG TERM 286 160674 - 160696 + g 77 -13.4 -2.90901 | opp_overlap 160663 160664 160679, overlap 160672 AAAAGCCGCCTGATA GCACAGGCGC GAG GCGCCTCTGC TATCGTTCACGGTGT TERM 287 161031 - 161019 - G 75 -5.5 -4.58585 | GAGGCAAACAACAAA GACAC ACA GTGCC AGGAAACATAGCTGA Dole_0148 162740 - 161253 - | transglutaminase domain-containing protein TERM 288 161764 - 161739 - G 80 -10.3 -3.96148 | opp_overlap 161740 GTCTGCCAGCAGAAA GGGCGCCAGCC GGCC GGCCGGAACCC GGTCCCCCCGGCCGT TERM 289 162499 - 162485 - G 93 -5.7 -5.42259 | opp_overlap 162491, overlap 162497 TGATGTTTAAAAAAA CGGTT TCAGC AACCG CGTAGCCGTCTGCTG TERM 290 162708 - 162686 - G 87 -14.8 -3.39018 | overlap 162684 GCAGCACGGCAAACA GGCCGGCCAT CAG AAGGCCGGCC ATCCAGTAGGGTTTC Dole_0149 164750 - 162933 - | DNA mismatch repair protein MutL TERM 291 163038 - 163050 + g 74 -6.2 -4.42806 | overlap 163029 GCAGCCGTCCAGCCG GGCC AGCAG GGCC TTTATTTCCGCCTCG TERM 292 163200 - 163230 + g 89 -16.1 -3.33696 | CACCATGGGGCCAAC GGCCGTGTCGGCC AGGAC GGCGGGCACGGCC TTGATTACAAAGGCG TERM 293 163725 - 163714 - G 91 -7.2 -5.27335 | opp_overlap 163713 163724, overlap 163715 CCCGGCAAAGAAAAA GCCG GCGC CGGC CGGGATGGCTTTTGT TERM 294 163728 - 163715 - G 72 -9.5 -3.75678 | opp_overlap 163713 163724, overlap 163714 CCGGCAAAGAAAAAG CCGGC GCCG GCCGG GATGGCTTTTGTCCG TERM 295 163724 - 163734 + g 70 -4.6 -4.431 | opp_overlap 163714 163715, overlap 163713 AAAAAGCCGGCGCCG GCCG GGA TGGC TTTTGTCCGTCGCTC TERM 296 164315 - 164301 - G 83 -7.8 -4.56597 | opp_overlap 164301 CGGGGTGTTGAAAAA GAGGCG GCC CACCTC CACTGTGGTGCCCGG Dole_0150 164998 - 164810 - | hypothetical protein Dole_0151 166474 - 165014 - | glutamyl-tRNA(Gln) amidotransferase, A subunit Dole_0152 166794 - 166507 - | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 297 167033 - 167006 - g 78 -6.3 -4.56775 | ACTGTCGTTTAAAAA CCGGATTTTTC TGTCCG GAAAGACCCGG GTGGCGGTGTTCGGC TERM 298 167262 - 167282 + G 78 -6.7 -4.57569 | overlap 167264 CTGGTGCACTCCCTG CCGGTGGCG GCC CGGCACCTG TTTTTCGCCCGGTGG TERM 299 167894 - 167909 + G 84 -7.5 -4.72272 | overlap 167891 167900 167901 167904 GCCGGCCTTTCTCCC GGCCC CTGCGC GGGCC TTTTTCGTAAAGGAG TERM 300 168486 - 168501 + G 83 -8.2 -4.57569 | overlap 168473 GTGCTGGAGGCCGGT CCGGCC AGCC GGCTGG TTTTTGCCGGCCTGC Dole_0153 166953 - 168641 + | hypothetical protein Dole_0154 169213 - 168653 - | hypothetical protein TERM 301 168865 - 168878 + g 87 -3.8 -5.42259 | overlap 168861 GGGTGGCTGCCTTGC CCAG CAGTTT CTGG TTTTTTTCCACGTAG TERM 302 169072 - 169061 - G 71 -7.2 -4.15044 | opp_overlap 169061 169060 GTCTGTCTGAATAAA GCGG TTTA CCGC ATTGTCGCTTGCCTT TERM 303 169256 - 169293 + H 73 -3.5 -5.00616 | opp_overlap 169267, overlap 169260 169262 GTGATAAAACGTTAA TAATTATAGAACAGACT TCAA AGTCTGATCAATGCTTA TTTTTTCGGGGGCAG TERM 304 169682 - 169665 - H 88 -7.1 -5.03314 | opp_overlap 169664 GTCACCGCCAAAAAA TGAATGA GCGT TCATTCA CTATGGTGTCAAGTT TERM 305 169888 - 169870 - g 88 -5.2 -5.32882 | GATGAGCAGAAAAAA GATCCCGC GGC ACGGAACC GCATCGTAAAGTTCG TERM 306 170995 - 170979 - g 77 -7.9 -4.323 | overlap 170982 GGCAAAGATGGAAAA GGACGGC CTG GCCGTTC CGGAAAAGGTCAAGA TERM 307 171295 - 171342 + G 86 -11.9 -4.07568 | gap 1, opp_overlap 171321 TATGTGGATGCCAAC GGCGCC-GGCATGGTGCTGGGC AACCA GGCCGGCGGCATGCCCGGGGCC TTTTCCGCGGGCGCC TERM 308 171879 - 171861 - g 72 -4.4 -4.56597 | GCCGCCGGCCAAAAA GCCCCTCA AGG TGCTGGGC GAGGCGGCCTGGGGT Dole_0155 169729 - 172134 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding Dole_0156 172147 - 173331 + | acetyl-CoA acetyltransferase TERM 309 173359 - 173392 + F 100 -8.8 -5.4833 | opp_overlap 173359 ACGGCAACACCAAAA GCCGGATCTTCCTG AAGTCC TGGGAAGGCCCGGC TTTTTTATTGAGTCC TERM 310 173392 - 173359 - f 76 -7.4 -4.43012 | opp_overlap 173359 ACGGCAACACCAAAA GCCGGATCTTCC TGAAGTCCTG GGAAGGCCCGGC TTTTTTATTGAGTCC TERM 311 174051 - 174067 + G 71 -7.2 -4.24123 | overlap 174027 GCCGCGGTCATCATC GGGGCC GGCGG GGCCTC TTTTGAAATTATTCG Dole_0157 173580 - 174560 + | NAD-dependent epimerase/dehydratase Dole_0158 174557 - 175009 + | hypothetical protein Dole_0159 175179 - 175652 + | UspA domain-containing protein TERM 312 175678 - 175695 + F 79 -3.4 -5.28414 | gap 1 TCACGAGTTGATTGG GCCGCGT TTTGC AC-CGGC TTTTTGTCTTTCTTG Dole_0160 175844 - 176248 + | UspA domain-containing protein TERM 313 176237 - 176262 + T 77 -3.9 -5.09173 | gap 1, overlap 176238 176239 CTTACAATAAATCAC CG-GCCCTCCTG AAA CAGGAGCGCTCC TTTTTTGAGATGTTC TERM 314 176239 - 176259 + T 78 -11.1 -3.38726 | overlap 176238 176237 TACAATAAATCACCG GCCCTCCTG AAA CAGGAGCGC TCCTTTTTTGAGATG Dole_0161 177982 - 176276 - | TrkA domain-containing protein TERM 315 176443 - 176472 + g 80 -2.1 -5.26875 | gap 1, opp_overlap 176451 176454 CGGTCTGCTCGCGGA TGGAGAGATCAGCC AGT GCCTGA-CTTACCA TTTTTTCGTTCAGGG TERM 316 177084 - 177111 + g 79 -7 -4.65895 | gap 1, overlap 177070 177085 ACCGTTACGCCGGCG ACCTGGCG-AAGG CGG CTTTCCGCCAGGG TTTTTCCCTGAAGCC TERM 317 178227 - 178210 - g 74 -2.7 -5.01732 | overlap 178211 AACGCGTTGAAAAAA TGGAAAA GATA TTTTCCC CCCGGTCCGTGGCCC TERM 318 178905 - 178888 - g 85 -3.3 -5.44119 | opp_overlap 178893, overlap 178856 GCGAGGCGAAAAAAA CCGCCCT GGAA AAGCCGG TCATTCTCATTAAAA TERM 319 179214 - 179204 - g 79 -6.8 -4.60041 | AGCCACCGTTAAAAA GCTC CGG GAGC AGCTTCCCGCCTGGT Dole_0162 178152 - 179702 + | CoA-binding domain-containing protein TERM 320 179936 - 179923 - g 93 -5.9 -5.40072 | GTCGCTTGAAAAAAA CGGCC ACCT GACCG ATGAATTAAAACAGC TERM 321 180065 - 180046 - g 82 -10.6 -4.18494 | opp_overlap 180046 180036 180040 GATGGCCAGGGAAAA GGGCCTGG AGCC CCTGGCCC TGGTTCTTCTGGAAC TERM 322 180163 - 180133 - g 74 -8.1 -4.11216 | opp_overlap 180153 180154 TGTTGACCCGGAAAA GGGCGTGGCCTCG GTTGA CGAGGCCCTGGCC GGGGCCCGGGACATT TERM 323 180580 - 180560 - g 79 -5.3 -4.85782 | opp_overlap 180560, overlap 180561 GCTGCCAAAAAGAAA GCGGATGCC GAA GCCATCCGG ATCTTTGCCGAAAAC TERM 324 180787 - 180775 - g 72 -9.1 -3.89346 | GGCGGACCGGATAAA GTCGC TGT GCGAC CAGTTCGAGGTGGAG Dole_0163 179699 - 181978 + | RNA-binding S1 domain-containing protein TERM 325 182564 - 182575 + G 70 -2.2 -4.82901 | TCGTCAACGATTCAG GGAG CAAA TTCC TTTTTCTAAGGGGCG Dole_0164 182182 - 184158 + | AMP-dependent synthetase and ligase TERM 326 184194 - 184213 + F 100 -11.4 -5.35354 | opp_overlap 184185 184194 TAATAACCCCAAAAA GCCGCGGA CCTT TTCGCGGC TTTTTTACTTGTGTG TERM 327 184213 - 184194 - f 100 -9.2 -4.70626 | opp_overlap 184194, overlap 184185 TAATAACCCCAAAAA GCCGCGGA CCTT TTCGCGGC TTTTTTACTTGTGTG Dole_0165 184295 - 184627 + | TfoX domain-containing protein TERM 328 184790 - 184777 - g 70 -3.8 -4.56597 | overlap 184787 184789 GGGCGCCTTGAAAAA GGTG AGATAA CACC AACAGATCTGGTGGA Dole_0166 184693 - 186132 + | amidase Dole_0167 187033 - 186392 - | TetR family transcriptional regulator TERM 329 186948 - 186966 + g 87 -3.8 -5.33921 | opp_overlap 186948 TTTTCAGCAAAAAGC TCCCAAGC TGC GTTTAGGA TTTTTTCCTTGGTTT TERM 330 187107 - 187144 + H 88 -13.9 -2.66435 | opp_overlap 187107 187111 187119, overlap 187111 187117 187117 187119 ACCCTAATTTAAGGA TCAATAAAAATATGATA TTCG TATCATGTTTTTATTGA TAATATGATACAGAT TERM 331 187144 - 187107 - H 76 -11.7 -2.78891 | opp_overlap 187107 187111 187117 187117 187119, overlap 187111 187119 ACCCTAATTTAAGGA TCAATAAAAATATGATA TTCG TATCATGTTTTTATTGA TAATATGATACAGAT TERM 332 187117 - 187134 + H 75 -3.5 -5.15167 | opp_overlap 187111 187107 187119, overlap 187111 187107 187117 187119 AAGGATCAATAAAAA TATGATA TTCG TATCATG TTTTTATTGATAATA Dole_0168 187230 - 188261 + | enoyl-CoA hydratase/isomerase TERM 333 188430 - 188408 - g 81 -4 -5.0538 | overlap 188409 GCCGACGCCAAAAAA CTGCGGGACG CCT CCTCCGGCAA AATCACGACGGTGAT TERM 334 188515 - 188500 - g 71 -7.5 -4.24948 | opp_overlap 188508 TCAGGAGATCGAAAA GGCCC TTGGCG GGGCC GGCCTGGACGCGCTC TERM 335 188848 - 188835 - g 78 -3.7 -4.95155 | TGCAGACCATAAAAA CACCC ATGT GGGAG AAGATAGACATCAGC Dole_0169 188285 - 189154 + | short-chain dehydrogenase/reductase SDR Dole_0170 189216 - 189542 + | DNA-binding protein Dole_0171 191494 - 189575 - | ABC transporter-related protein TERM 336 189951 - 189940 - G 75 -5.8 -4.56597 | overlap 189944 CGTTGCCTTCAAAAA CCAG CGTG CTGG TCACGATATGGTTTA TERM 337 189995 - 189971 - G 72 -5 -4.59109 | gap 1 GATATGGTTTAAAAA GCTTC-GGTCA TGGC TGACCAGCAGC AGGGTGCCGTCATAG TERM 338 190538 - 190560 + g 78 -9.9 -4.07687 | gap 1, overlap 190542 GCGTTCGGCCTCCTG CAGCGCCAGG CGCA CCTGGC-CTG TTTTGGCGCGGCGCT TERM 339 190805 - 190772 - G 72 -6.7 -4.3586 | gap 1, opp_overlap 190800, overlap 190775 GCAGGCATAGGAAAA CAGCCGG-CCACGGTC CAG GACCATAATCCGGGTG GCGATCCGTTCTAAA Dole_0172 192492 - 191515 - | alpha/beta hydrolase fold TERM 340 191624 - 191641 + g 76 -3.3 -4.91109 | opp_overlap 191585 AGTGTCAGTGTCAGG CTTTGCG GGCG CGCCAGG TTTTTGTAATCCAGC TERM 341 192362 - 192329 - G 77 -2.4 -5.06414 | gap 1, overlap 192330 192331 TGGGGGGAATAAAAA CCCTGGA-GCCGG ACCCCGTCG CCGGCATCCACGA TCATCTCCCGGCCGG Dole_0173 193378 - 192500 - | radical SAM domain-containing protein TERM 342 192659 - 192680 + g 76 -11.7 -3.40593 | GGTCAGGTTGTCGAT GGTGATGTT TTCA AACATCACC TTCATCTCTTCTAAT TERM 343 193032 - 193047 + g 80 -4.6 -5.02074 | overlap 193006 193004 GCGCCCCTCAGGCGC GCAAGG TCGG CCATGC TTTTTTCCAAAGTGC TERM 344 193463 - 193487 + H 70 -10 -3.17714 | overlap 193466 TGCACCCCTCGTCAC TGCGGCGTAC GACAA GTACGCCTCA TTCCTCGGGATTTGC TERM 345 193466 - 193484 + H 71 -10.3 -2.78395 | overlap 193463 ACCCCTCGTCACTGC GGCGTAC GACAA GTACGCC TCATTCCTCGGGATT Dole_0174 193732 - 194274 + | peptidylprolyl isomerase FKBP-type TERM 346 194337 - 194362 + T 100 -7.5 -5.63517 | opp_overlap 194337 TCTAAAAACAAAAAA GGCCTCGGG AGATATGG TCCGGGGCC TTTTTTATTTGCCGG TERM 347 194362 - 194337 - T 100 -4.6 -5.93252 | opp_overlap 194337 TCTAAAAACAAAAAA GGCCTCGG GAGATATGGT CCGGGGCC TTTTTTATTTGCCGG Dole_0175 195065 - 194367 - | TetR family transcriptional regulator TERM 348 194917 - 194902 - G 78 -6.1 -4.56775 | AGGCCGTGGTAAAAA TCGCC CTGGGT GGCGA TCATGCGGATGCTGG Dole_0176 195263 - 196111 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 349 196429 - 196418 - g 76 -4.4 -4.72272 | TGGCTGGAGGAAAAA GGAT ACAA ATCC GTACGGATCCACGCC Dole_0177 196133 - 197182 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Dole_0178 197194 - 198024 + | hypothetical protein Dole_0179 198054 - 198575 + | hypothetical protein Dole_0180 198631 - 199026 + | endoribonuclease L-PSP TERM 350 199341 - 199383 + G 80 -10.4 -4.07568 | opp_overlap 199341, overlap 199343 199344 199346 ATTACTGGCAGACGA GGCCAGGACCCGGCTGGC GGATATG GCCGGCCGGGGCCTGCTG TTTTCCAAGACCAAG TERM 351 199343 - 199381 + G 95 -15.2 -3.63744 | opp_overlap 199341, overlap 199341 199344 199346 TACTGGCAGACGAGG CCAGGACCCGGCTGGC GGATATG GCCGGCCGGGGCCTGC TGTTTTCCAAGACCA TERM 352 199344 - 199380 + G 100 -18.7 -2.78032 | opp_overlap 199341, overlap 199343 199341 199346 ACTGGCAGACGAGGC CAGGACCCGGCTGGC GGATATG GCCGGCCGGGGCCTG CTGTTTTCCAAGACC TERM 353 199346 - 199378 + G 84 -15.5 -2.93623 | opp_overlap 199341, overlap 199344 199343 199341 TGGCAGACGAGGCCA GGACCCGGCTGGC GGATATG GCCGGCCGGGGCC TGCTGTTTTCCAAGA TERM 354 199418 - 199428 + G 74 -8.2 -4.17556 | overlap 199426 ATACAACCCTTTACG CGGC AAC GCCG TTTGTTCACGGTATC TERM 355 199702 - 199692 - g 71 -6.8 -4.10161 | GACCATCCTTGAAAA TGCC TGC GGCA AAGTCGTAGAGGCCT Dole_0181 199141 - 200208 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Dole_0182 200407 - 201270 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Dole_0183 201532 - 202692 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Dole_0184 202839 - 203846 + | TetR family transcriptional regulator TERM 356 204037 - 204051 + G 78 -4.3 -5.00616 | TCAGACGGCGGCATC GGTAT TGCCT ATACC TTTTTTGAAAACAAG Dole_0185 203920 - 204675 + | hypothetical protein Dole_0186 205612 - 204860 - | MerR family transcriptional regulator TERM 357 205192 - 205175 - G 72 -4.8 -4.64861 | gap 1, overlap 205176 205177 GTCTTTTAAAAGAAA GCCGGCC TCCAC GGCC-GC GTCAAAGTCTTCAGT TERM 358 205891 - 205867 - H 80 -4.3 -5.252 | overlap 205868 CATGCCCATAAAAAA GCTTGACAAGA ACA TTTTGTCAAGT TAAAAGTGAAAAGTC TERM 359 205907 - 205919 + H 75 -3.4 -5.05037 | overlap 205897 TAAAAGTGAAAAGTC TAGC TTTTT GCTA TTTGTTTTTCTGTTC TERM 360 206907 - 206889 - g 75 -9.5 -3.92641 | opp_overlap 206902, overlap 206868 AAGCTCAGGCATAAA CCAGGCC TGCGG GGCCCGG CTGCCGGAGCTGATG Dole_0187 205948 - 206940 + | molybdenum cofactor biosynthesis protein A TERM 361 207096 - 207082 - f 83 -2.1 -5.55769 | TTTGATAAGAAAAAA TGCTG AACCA CAACA GAGACGGACACGTCA TERM 362 207261 - 207251 - g 90 -6.8 -5.11033 | CAGAACTTTAAAAAA TCGG TTT CCGA GGTAAAACACGAAGG TERM 363 207360 - 207305 - g 81 -4 -5.06451 | gap 1, opp_overlap 207311, overlap 207311 GAGGAGGGCAAAAAA GAGAAAGAGGCCACCCCGTCCGCATAA GTT TAATG-GGACGCCGCAGCCTCTTTGTA TGAGCGGGAATCAGG Dole_0188 207128 - 207331 + | twin arginine-targeting protein translocase TERM 364 207354 - 207311 - T 80 -7.4 -4.64992 | gap 1, opp_overlap 207311, overlap 207305 GGCAAAAAAGAGAAA GAGGCCACCCCGTCCGCATAA GTT TAATG-GGACGCCGCAGCCTC TTTGTATGAGCGGGA Dole_0189 208126 - 207371 - | MerR family transcriptional regulator TERM 365 207731 - 207746 + g 73 -3.2 -4.72272 | opp_overlap 207724 207726 TGGAGAGAGACCGGT GGCC AGGATCAG GGCC TTTTTGGTGAGAAAC TERM 366 207969 - 207983 + g 95 -7 -5.44119 | CGGGCGTCGTAGTAG GCGGTG GTG CCCCGC TTTTTTTCAGGTGGC Dole_0190 208707 - 208138 - | formylmethanofuran dehydrogenase subunit E region TERM 367 209173 - 209151 - g 76 -12.7 -3.05384 | gap 1 TCTTTTTTGAGCTAA CCCG-CCGCC TGCT GGCGGACGGG GTCCGGGCCGTCGGA Dole_0191 208961 - 209368 + | hypothetical protein Dole_0192 209441 - 210022 + | Rieske (2Fe-2S) domain-containing protein TERM 368 210086 - 210075 - g 79 -7.2 -4.56775 | overlap 210076 210077 AGCTTTGCCGAAAAA GGCG CGCG CGCC CAAGCGGCAGGCCAT Dole_0193 210022 - 210387 + | hypothetical protein TERM 369 212636 - 212671 + G 74 -8.2 -4.18018 | TTTGTGCCCCGGACC CCGGTCCAGGAAGAGT ACAT GCCCTTCCTGAACCAG TTTTCCGTACGGGAC TERM 370 213318 - 213298 - g 71 -8.1 -4.08767 | overlap 213299 GGCACGGCCGGAAAA GGGCGCGGC CAA GCCGGGCCA GGTGATCATCTACCA Dole_0194 210524 - 213505 + | molybdopterin oxidoreductase TERM 371 213663 - 213647 - g 71 -10.1 -3.53091 | overlap 213650 AGGCGGTCCTTGAAA CAGCGGC CAC ACCGCTG GCCAACCAGCCGTCG TERM 372 213971 - 213957 - g 70 -2.1 -4.7416 | gap 1 GGAAAAGCCCAAAAA CCA-GG TTTC CCATGG GCTCTCCACGTCCCT Dole_0195 213550 - 214215 + | gamma-subunit of ethylbenzene dehydrogenase TERM 373 214302 - 214291 - g 70 -2.2 -4.72272 | GCTGTTGATGAAAAA GTCC TTAC AGAC AGGGAAAAGGAGCTG TERM 374 214707 - 214680 - g 78 -6.2 -4.62069 | overlap 214683 CCTGCAGGCCAAAAA CCAGACCGAC GGCAGCGT GCCGGACTGG TCCATGAACTGGGAC Dole_0196 214273 - 215442 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Dole_0197 215484 - 216233 + | delta-subunit of ethylbenzene dehydrogenase TERM 375 216869 - 216897 + G 78 -8.7 -4.23892 | opp_overlap 216852 TGTTGCTGGGCGACA GCGTGGTGGGGGG AAA CGCCCTGCTGCGC TTTTACGTGCTTCAC Dole_0198 216247 - 217002 + | cytochrome b/b6 domain-containing protein TERM 376 217080 - 217058 - g 71 -7.7 -4.00532 | gap 2, opp_overlap 217067 GGGCGAAAGACTAAA CCGGAACCGCC CGA GGCGG--CCGG CCGGGGGTATGTGTT TERM 377 217354 - 217370 + G 71 -7.9 -4.02132 | opp_overlap 217354 GTACATAGACACCAA CCCCCGT GGC GTGGGGG TTTATAACTTTAAGG Dole_0199 217025 - 217768 + | hypothetical protein TERM 378 218002 - 217990 - g 85 -3.3 -5.41143 | GAGGCGGTAAAAAAA TGGGC CAA GCTCA AGGACGGCCATGACC TERM 379 218893 - 218856 - g 78 -2.8 -5.1101 | gap 2, overlap 218857 218858 218886 GGAGGACGTAAAAAA CCTCGCGGTCTATCTGAC CACG GTCA-A-AGACGGGGAGG TGGGTACCCGGCTCG TERM 380 219599 - 219566 - g 78 -3.7 -5.02074 | opp_overlap 219569 TGATGCCGGAAAAAA GCCGGCGCGTGAG CCCCATTC CTTATGAGCCGGC CCTGGTGCAGACCGA TERM 381 219883 - 219904 + G 72 -6.5 -4.37067 | gap 1 ATTCCCGACCCCGAG GCGTGG-CTG GAC CGGACCGCGC TTTTCCTGATGTTTA Dole_0200 217765 - 219996 + | cytochrome c class I TERM 382 220032 - 220044 + F 71 -2.7 -4.8622 | ATTCAGGTTTGTACG CGAAA CGA TTTTG TTTTTCCTTGCCGCC TERM 383 220058 - 220081 + F 79 -11.8 -3.18511 | gap 1, overlap 220054 220059 TGTTTTTCCTTGCCG C-CGGAAAGCC GCT GGCTTTCCGTG TTGCGTGTCTGTATA TERM 384 220059 - 220079 + F 100 -15.5 -3.14839 | overlap 220054 220058 GTTTTTCCTTGCCGC CGGAAAGCC GCT GGCTTTCCG TGTTGCGTGTCTGTA TERM 385 220195 - 220207 + G 74 -6.9 -4.36508 | TCTGCTTCGGTGGTC CGGCT GAC GGCCG TTGTTCTTTTTATGG TERM 386 221125 - 221106 - g 82 -6.4 -4.82901 | opp_overlap 221124 GGGGCTCGAGAAAAA CGTGATTG CCGG CAATCGCG CGCCCAACGGTGGGG TERM 387 222432 - 222457 + G 91 -12.5 -4.053 | gap 1, opp_overlap 222429 222431 222432 AATTTCCCACAACAC CGCCACCAGCCC CAG GGGCGGG-GGCG TTTATCTCAACTACT TERM 388 222457 - 222432 - g 71 -12.5 -2.53119 | gap 1, opp_overlap 222432, overlap 222429 222431 AATTTCCCACAACAC CGCCACCAGCCC CAG GGGCGGG-GGCG TTTATCTCAACTACT Dole_0201 220159 - 222813 + | carbohydrate-binding and sugar hydrolysis Dole_0202 222953 - 224179 + | molybdenum cofactor synthesis domain-containing protein TERM 389 224319 - 224287 - g 78 -14.1 -2.66435 | overlap 224284 224315 AGTTTGACGACATGA TGGGCAGCCTTCGGG CCA CCGGAAAGCAGCCCA AGGGGGTCATCGGTG TERM 390 225134 - 225167 + G 77 -11.8 -3.53224 | gap 2, overlap 225112 225113 CTCCCGGGTGGGTGT GGCCGCCTTTGGCTCG AGCG CG-GCCAAGGG-GGCC TTTGAGCAGGCCCTG TERM 391 225283 - 225269 - g 76 -3.5 -4.89852 | gap 1, overlap 225271 CGAGATGTACAAAAA CGCGGC CGTG GCC-CG AATGGCTTACAGTGA Dole_0203 224226 - 225737 + | acyl-CoA dehydrogenase domain-containing protein TERM 392 226496 - 226484 - g 72 -4.8 -4.62069 | overlap 226486 GGCCTATTTTAAAAA GGTG GCCGA CACC ATGCAGCTGGCAGCC Dole_0204 225801 - 226913 + | acyl-CoA dehydrogenase domain-containing protein TERM 393 226962 - 226986 + F 88 -14.2 -2.82015 | opp_overlap 226960 ACGCGGGATATGATG GGGGCACGGC AACAG GCCGCGCCCC TGTCGTGCATATCAG TERM 394 228239 - 228218 - g 70 -3.7 -4.59511 | gap 1, overlap 228220 AAGACCTGTCAAAAA TTGT-GGTGG CCT CCACCGACGA CGTGAACATAAATAT Dole_0205 227044 - 228987 + | methyl-accepting chemotaxis sensory transducer TERM 395 229310 - 229298 - g 80 -4.9 -4.91511 | opp_overlap 229298 AGCGGAGCAGAAAAA TGAAA ATC TTTCA TATCGTGGGCCGGTC Dole_0206 229297 - 229776 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 396 229921 - 229934 + G 70 -3.7 -4.67982 | CGAATCTGGATAGAG GGGCC GGAC GGCAC TTTTCTTGGCTACGG Dole_0207 229858 - 230220 + | ModE family transcriptional regulator TERM 397 230855 - 230841 - g 75 -5.6 -4.58283 | overlap 230848 GAAGCTGCTCAAAAA CGGCAA ACC TGGCCG CGATGAACCAGGTTG Dole_0208 230312 - 231187 + | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 398 231484 - 231496 + G 71 -6.9 -4.20875 | overlap 231473 TCTCCCATTGCCCTT GGGGC CAT GCTCC TTATCTTTTTTAATA Dole_0209 231184 - 231960 + | binding-protein-dependent transport systems inner membrane component TERM 399 232779 - 232754 - g 76 -3.3 -5.00616 | gap 1, overlap 232756 CGTGCTGTCAAAAAA GATTT-CCCCCG GCA CAAGGGTAAACC TTTGCGTCCGGCAGC Dole_0210 231957 - 233048 + | ABC transporter-related protein Dole_0211 233361 - 233101 - | hypothetical protein Dole_0212 233500 - 234420 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein TERM 400 234443 - 234455 + G 83 -5.5 -4.98857 | CCTGCCTGGGGGTTT TTGCC GGT GGCGA TTTTTCTGGTTGCCT TERM 401 234484 - 234508 + G 100 -11.3 -5.24129 | overlap 234477 234486 CTGGGAAGTGGTGGC CAGGGCCGGCA TAT TGCCGGGCCGG TTTTTTCTGCCCCCC TERM 402 234486 - 234506 + G 73 -12.5 -2.83915 | overlap 234477 234484 GGGAAGTGGTGGCCA GGGCCGGCA TAT TGCCGGGCC GGTTTTTTCTGCCCC Dole_0213 234410 - 235168 + | binding-protein-dependent transport systems inner membrane component TERM 403 235335 - 235345 + G 90 -4.6 -5.40072 | overlap 235328 GTTTTATCCCTCCCA CGGC GGT GCTG TTTTTTTAAACGGCC TERM 404 235503 - 235452 - g 90 -5.1 -5.42259 | gap 3, opp_overlap 235489, overlap 235454 235455 235456 GGACGTGGAAAAAAA CATTCGGTTCGGTCTTCA-CGGCGCC GGG GGCGCCGATGCCGACCGCATCG--TG GACCGGCTTTGCGAC TERM 405 235503 - 235454 - g 74 -6.9 -4.35085 | gap 1, opp_overlap 235489, overlap 235452 235455 235456 ACGTGGAAAAAAACA TTCGGTTCGGTCTTCA-CGGCGCC GGG GGCGCCGATGCCGACCGCATCGTG GACCGGCTTTGCGAC TERM 406 235501 - 235456 - g 74 -13.9 -2.51257 | gap 1, opp_overlap 235489, overlap 235455 235452 235454 GTGGAAAAAAACATT CGGTTCGGTCTTCA-CGGCGCC GGG GGCGCCGATGCCGACCGCATCG TGGACCGGCTTTGCG TERM 407 235833 - 235857 + G 93 -9.9 -4.74103 | opp_overlap 235818 GGCGATATTTGAACG CCCGGCCACCT GCG ACGTGGCCCGG TTTTTAAATTACCGC TERM 408 235978 - 235958 - g 90 -3.1 -5.75342 | overlap 235959 235961 TGGTTTCAAAAAAAA TTACCCCCG GCA CGCGGGCCA CCTTCTGCGTTCGCC Dole_0214 235165 - 236256 + | ABC transporter-related protein TERM 409 236939 - 236905 - g 74 -7.6 -4.18494 | overlap 236893 236906 236924 TATCGGCACTGAAAA GCGCGGCGCCCGCATC GAA GGCCCGGACGCCACGG CCGATGCCATAAAGT Dole_0215 236378 - 237106 + | hypothetical protein Dole_0216 237312 - 237557 + | hypothetical protein TERM 410 237586 - 237617 + T 100 -21 -5.75342 | opp_overlap 237580 237579 AAAAAAACCGTTAAC GCCGGCAGATGTGA AAAT TCGCATCTGCCGGC TTTTTTTTGCAAAAG Dole_0217 238706 - 237669 - | lipid-binding START domain-containing protein TERM 411 238843 - 238827 - H 74 -6.5 -4.43477 | opp_overlap 238839, overlap 238839 CGCATGCAAGCAAAA CCGGC AAAAAAA GCCGG TGCAAGACAACTGCG TERM 412 238863 - 238839 - H 100 -9.2 -5.4477 | opp_overlap 238839 238851 238854 238855, overlap 238827 238854 238855 AAACCGGCAAAAAAA GCCGGTGCAA GACAA CTGCGCCGGC TTTGCAAAACCGGCG TERM 413 238839 - 238863 + H 79 -10.7 -3.53012 | opp_overlap 238827 238839 238854 238855, overlap 238851 238854 238855 AAACCGGCAAAAAAA GCCGGTGCA AGACAAC TGCGCCGGC TTTGCAAAACCGGCG TERM 414 238881 - 238854 - H 71 -8.4 -3.65812 | opp_overlap 238839 238851 238854 238855, overlap 238839 238855 GCCGGTGCAAGACAA CTGCGCCGGCTT TGCA AAACCGGCGGAA TATGTTTTAACCCGA Dole_0218 238924 - 239370 + | hypothetical protein TERM 415 240162 - 240183 + G 76 -5 -4.73388 | opp_overlap 240157, overlap 240163 TTCGCATCAACCCGG TGGCGCCC TATACC GGGTGCCC TTTTTCCTGCAAGTT TERM 416 240473 - 240483 + G 77 -2.4 -5.14965 | opp_overlap 240463 240462 240460, overlap 240468 AAGATCCGCCGGTCC GGGG GCA CCCA TTTTTTCATCGGGCT TERM 417 241041 - 241021 - g 80 -2.3 -5.24129 | overlap 241023 TCGCCCCACAAAAAA CGGCCGCGG GTT CCGGGTGCG GCAGCGGTTTCTCGA Dole_0219 239438 - 241240 + | radical SAM domain-containing protein Dole_0220 241252 - 241419 + | hypothetical protein TERM 418 241964 - 241953 - g 71 -7.2 -4.23892 | opp_overlap 241959 241961 CGCAACCACGCAAAA GGCC CCCA GGCC GCTGACCTGTATGTC TERM 419 242094 - 242147 + G 72 -5.1 -4.64613 | gap 1 GGGGGGGCGGACATG GCGCCGGTGCTTCAGGCGGGC-ATTG ACA CGATTGCGCGCCTGGAGGGCGAGAGC TTTTCCTTCTTTATC TERM 420 242312 - 242301 - g 70 -2.2 -4.77036 | TGGCAGCAGGAAAAA GACA GTCT TGCC TGGCTGAAAAAAGAG TERM 421 242353 - 242325 - g 78 -3.8 -5.00616 | gap 1, opp_overlap 242341 242344, overlap 242327 242330 GCCTGGCTGAAAAAA GAGATCGGCTGGA CCGC TCCGGCC-ACCCC TGCCCAGGAGGAGGT TERM 422 242461 - 242446 - g 77 -8.2 -4.3467 | overlap 242447 AGCTGGAGACCAAAA CCCCGG ATTC CCGGGA ACGGTGCCGGCAACT TERM 423 242947 - 242907 - g 87 -9.7 -4.67608 | overlap 242932 242933 GACTGGAAGATAAAA GCCAACAAGGCCCACAT TCAGAAC ATTCGGGCCTGGCTGGC CCTGATCCGGGAAAA TERM 424 243116 - 243129 + G 87 -3.7 -5.40072 | opp_overlap 243101 GGTCAAGCAGTTTGC CCGCC TGCT GCCGG TTTTTTTCAACGACA Dole_0221 241716 - 245924 + | pyruvate phosphate dikinase PEP/pyruvate-binding TERM 425 245918 - 245957 + F 83 -11.6 -3.53012 | GAAGGTGGAGGCGTA CCTGTAGCCCGAATATTT CATG AAATATCCGGGTTAGAGG TTTAAACCAGGGCCG Dole_0222 246005 - 247258 + | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) Dole_0223 247351 - 247746 + | response regulator receiver protein TERM 426 247762 - 247803 + T 100 -21.7 -2.93708 | opp_overlap 247767, overlap 247767 CAGGGGGGTGTAGTT AAAAAGCCGGATGCGAGCG CTAG CGCCCGCATCCGGCTTTTC GTGTTTTTAAGCCGG TERM 427 247798 - 247767 - T 100 -23.8 -4.65895 | opp_overlap 247762 247767 GGGTGTAGTTAAAAA GCCGGATGCGAGCG CTAG CGCCCGCATCCGGC TTTTCGTGTTTTTAA TERM 428 247767 - 247798 + T 100 -21.6 -4.60746 | opp_overlap 247767, overlap 247762 GGGTGTAGTTAAAAA GCCGGATGCGAGCG CTAG CGCCCGCATCCGGC TTTTCGTGTTTTTAA TERM 429 247816 - 247831 + T 100 -9 -6.08563 | TTCGTGTTTTTAAGC CGGTTC AAAA GAACCG TTTTTTTTATCTGTT Dole_0224 249020 - 247845 - | acetyl-CoA acetyltransferase TERM 430 248240 - 248256 + g 70 -3.6 -4.60487 | opp_overlap 248240 TGTATGTGTAGGAAA GGCCCA GCGCG TCGGCC TTTTTGCGGCTCATC TERM 431 248445 - 248457 + g 70 -4.1 -4.66833 | GTCCAGGCCCTTGAT CGGAA CGA TTTCG TTTTTGAACTTGCCG Dole_0225 250896 - 249046 - | AMP-dependent synthetase and ligase TERM 432 249205 - 249193 - G 74 -7.7 -4.15044 | opp_overlap 249196 249198 CCGTTCCCGAAGAAA GGAGA TGA TCTCC TCGGGGGTCAGCTTT TERM 433 249793 - 249766 - G 82 -10.4 -4.1891 | opp_overlap 249768 249777 CCGGTTCAACAGAAA CGCGGACCCCGG CAGG CCGAGGGCCGTG CTGTTGAGGCGCTGG TERM 434 250191 - 250161 - G 74 -2.4 -4.99435 | CGTAAGAATGAAAAA GGGGCAAGCCGAGT AGA ACGGAAATTGCCCC TTTTAATATTTTGTG TERM 435 250375 - 250432 + g 88 -15.5 -3.56092 | CGGTGTGTTGGCGAT CAGGTCGGCCATCCATACGGCGTTGGG AATA TCCAGGGCCTTATGGGTGGCCGGCGGG TTTAAAGAGTAGTCA Dole_0226 251592 - 251032 - | sterol-binding domain-containing protein TERM 436 251189 - 251201 + g 77 -7.7 -4.2828 | GCCGGGGTGTCAGCA CCGTT GAA AACGG TTTTGATCGATACGG TERM 437 251833 - 251822 - g 70 -4.4 -4.49556 | opp_overlap 251822 TTTGGAGTAAAGAAA CTGA CATG TCAG TTTTATTATTAACCA TERM 438 251822 - 251833 + G 80 -4.4 -4.89477 | opp_overlap 251822 TTTGGAGTAAAGAAA CTGA CATG TCAG TTTTATTATTAACCA Dole_0227 251659 - 251907 + | hypothetical protein TERM 439 251912 - 251938 + F 72 -10.8 -2.71712 | opp_overlap 251911 251912, overlap 251911 GCGTAGCATAGAAAG CCGGTCAGCGGC GGC GCTGTTGACCGC ATTTGAGAGGACAAC TERM 440 252017 - 252003 - g 87 -7.2 -5.02074 | GCATGTTCGAAAAAA CTGTTT GCA AAACAG GGGTTTTACAGGACA TERM 441 252491 - 252481 - g 77 -8.2 -4.32233 | overlap 252482 AGAAAAAGGCCAAAA CCGG TGA CCGG GCCGACATCGACACC Dole_0228 251955 - 252572 + | TetR family transcriptional regulator Dole_0229 253778 - 252624 - | DNA-directed DNA polymerase TERM 442 253085 - 253115 + g 71 -6.9 -4.25256 | gap 2, overlap 253085 CCGGATGCCACGGCA C-CACCC-GGGAATC GTC GATTCCCCGGGAGAG TTCTTTTAATCGCCG Dole_0230 254403 - 253885 - | hypothetical protein TERM 443 254003 - 253992 - G 71 -7.2 -4.12188 | overlap 253993 GCAGCATCCTGAAAA CCGG GCCC CCGG CCAGAATGGTGGTAG TERM 444 254350 - 254340 - G 90 -8.2 -5.00616 | overlap 254341 GGTGCCGGGAAAAAA GGCC CCG GGCC TCCCACGCGTTGCAC Dole_0231 255181 - 254396 - | hypothetical protein TERM 445 255025 - 255035 + g 74 -2.4 -4.91712 | overlap 255019 TAACACCCAGCCAGG TGCC GCC GGCC TTTTTGTCCCTTCCG TERM 446 255357 - 255343 - H 79 -11.4 -3.14564 | overlap 255346 CCACGGCGGGATTAA CCACCG AGC CGGTGG CCGGGAGGTCCGGCA TERM 447 255483 - 255504 + H 100 -12.3 -5.68438 | AGCCAAATCATCCGA GGCAGCAGG AATC TCTGCTGCC TTTTTTATTTGATAC TERM 448 255873 - 255828 - H 78 -7.9 -4.36063 | gap 1, opp_overlap 255828 ATAACAGGATGAAAA CTTTTTATTGCACGGTAACAAT TAT AATGTTATCGTACAA-AAAAAG GTTATTGCGCCATGA TERM 449 255828 - 255874 + H 71 -8.2 -3.62597 | opp_overlap 255828 ATAACAGGATGAAAA CTTTTTATTGCACGGTAACAAT TAT AATGTTATCGTACAAAAAAAGG TTATTGCGCCATGAA Dole_0232 255885 - 256868 + | hypothetical protein TERM 450 257410 - 257384 - g 83 -5.7 -4.90778 | TTGACGCAAAGAAAA GCGGCCGGTGA AAACA TCGACAGCCGC GATATTAAAAAACAT Dole_0233 256865 - 257626 + | hypothetical protein TERM 451 258170 - 258146 - f 70 -10 -3.17714 | overlap 258149 GCAAATCCCGAGGAA TGAGGCGTAC TTGTC GTACGCCGCA GTGACGAGGGGTGCA TERM 452 258167 - 258149 - f 71 -10.3 -2.78395 | overlap 258146 AATCCCGAGGAATGA GGCGTAC TTGTC GTACGCC GCAGTGACGAGGGGT Dole_0234 258242 - 258874 + | LexA family transcriptional regulator TERM 453 258996 - 259030 + G 78 -8.4 -4.19817 | opp_overlap 258995 ATGCCGAAGACACAC CCTCCGGGAAAATGCT GGA AGCCTATGCCCGGCGG TTTTCCGTAACTGAG TERM 454 259416 - 259403 - g 95 -2.3 -5.81412 | overlap 259405 TTTACCGAAAAAAAA GTCAC CCTG GTGGC GGTGGATGTGCCGGA TERM 455 259577 - 259633 + G 72 -4.8 -4.66163 | gap 1, overlap 259579 259582 259613 GCCGCAGAACTGTCC CCCTGGGCCGACCAGCGCATTCCGCGG ATGG CCGCGCAG-GCAGGGGCCGGCCTGGTG TTTTTCAATAACCAT Dole_0235 258905 - 259720 + | hypothetical protein TERM 456 260022 - 260001 - g 72 -9.3 -3.67634 | opp_overlap 260003, overlap 259999 GACCATCGCAAAATA CGCCGGGGC GTAT ACCCCGGTG GTTGAACAGGGCAGC TERM 457 260166 - 260134 - g 81 -3.2 -5.21709 | gap 1 CGGCAGATCAAAAAA GACTTCGG-CCTGGC GCCG GCCTGGTCCGTGGCC GCCAATAAGCTGGTG TERM 458 260199 - 260175 - g 90 -15.7 -3.61398 | opp_overlap 260192 CGTGGCCGCCAATAA GCTGGTGGCCA AGG TGGCCACCCGC CTGGTAAAACCGGTG TERM 459 260772 - 260785 + G 83 -8.1 -4.59773 | GCTGCTCTTTCCCCC GGTCC AGCT GGACC TTTTTGACCATGACC Dole_0236 259717 - 260922 + | DNA-directed DNA polymerase TERM 460 262180 - 262162 - g 86 -3.1 -5.52384 | GGGTGACCAAAAAAA TGCCG TGGTTCTGG CGGCA GGACACCGCCGGCCT TERM 461 262471 - 262413 - g 72 -5.1 -4.60041 | overlap 262415 ATCCAGTGGGAAAAA GACCAGGCCGAGGATGCCGGGCTGGT-GA AAA TCGACCTGCTGGGCAACCGGAGCCTGG-C CGTGATCCGGGACGC TERM 462 262470 - 262415 - g 72 -8.8 -3.91506 | gap 1, overlap 262413 CCAGTGGGAAAAAGA CCAGGCCGAGGATGCCGGGCTGGT-GA AAA TCGACCTGCTGGGCAACCGGAGCCTGG CCGTGATCCGGGACG TERM 463 262652 - 262637 - g 82 -6.1 -4.82901 | opp_overlap 262637 GCTGTTGCAGAAAAA GTCCC GGGTGG GGGAC TTTGAACACCTGGTG TERM 464 262820 - 262844 + G 81 -9.1 -4.37092 | CCAGGAAGACGTGTC CCGGGCCGCTG TGT CCGTGGCCGGG TTTTCTCACGCCGAT TERM 465 262964 - 262952 - g 90 -10.5 -4.56597 | CGGGGCCGCCAAAAA CGGGG TGA CCCCG GAGAAGATTCGCGAG TERM 466 263307 - 263290 - g 77 -2 -5.13521 | gap 1, overlap 263291 263292 AAACCATGGAAAAAA CGCTTGC CCACC GCAAG-G CCGCACGTTTTACCG Dole_0237 260928 - 263939 + | DNA polymerase III, alpha subunit TERM 467 264732 - 264719 - g 90 -4.5 -5.45802 | opp_overlap 264719 CTCGCAAAAGAAAAA GGAAC AATA GCTCC TGAATTGGCCGCAGT TERM 468 265093 - 265105 + G 78 -3.4 -5.17353 | GCGCAATAACTATCG TCGT CTTGA ACGA TTTTTTACTGGATAT Dole_0238 264050 - 265327 + | hypothetical protein TERM 469 265390 - 265340 - T 100 -16.3 -3.20367 | gap 2, opp_overlap 265341 265342 265355 265362, overlap 265341 265355 TAACAACCGCATCAA CTCGGACTGGGAAAAGCAGCCCCGC TTC GCTATGCTGCTTTTCCCAG-CCG-G TTATGCGGAGCGTTA TERM 470 265390 - 265341 - T 100 -16.5 -2.51738 | gap 1, opp_overlap 265341 265342 265355 265362, overlap 265340 265355 AACAACCGCATCAAC TCGGACTGGGAAAAGCAGCCCCGC TTC GCTATGCTGCTTTTCCCAG-CCGG TTATGCGGAGCGTTA TERM 471 265341 - 265390 + T 100 -16.5 -3.29461 | gap 1, opp_overlap 265340 265341 265355, overlap 265342 265355 265362 AACAACCGCATCAAC TCGGACTGGGAAAAGCAGCCCCGC TTC GCTATGCTGCTTTTCCCAG-CCGG TTATGCGGAGCGTTA TERM 472 265342 - 265389 + T 100 -17.8 -2.57463 | gap 1, opp_overlap 265340 265341 265355, overlap 265341 265355 265362 ACAACCGCATCAACT CGGACTGGGAAAAGCAGCCCCGC TTC GCTATGCTGCTTTTCCCAG-CCG GTTATGCGGAGCGTT Dole_0239 266537 - 265545 - | transcriptional regulator-like protein TERM 473 267973 - 267983 + G 95 -6.8 -5.40072 | opp_overlap 267972 267973 GTGATCCGGAAAAAT CGCT GCA AGCG TTTTTTTACCACCGA TERM 474 268102 - 268066 - g 95 -7.1 -5.40474 | overlap 268072 268075 268076 ATGGCCGTAAAAAAA GCAAAAGAAGCCGGCCA TGC CGGCCGGGCTCCAATGC TTCAGGCGGTCCGGC TERM 475 268096 - 268072 - g 100 -9.9 -4.94243 | overlap 268066 268075 268076 GTAAAAAAAGCAAAA GAAGCCGGCCA TGC CGGCCGGGCTC CAATGCTTCAGGCGG TERM 476 268089 - 268075 - g 100 -12.8 -4.49041 | overlap 268072 268066 268076 AAAAAAGCAAAAGAA GCCGGC CAT GCCGGC CGGGCTCCAATGCTT TERM 477 268092 - 268076 - g 71 -11.5 -3.25764 | overlap 268075 268072 268066 AAAAAGCAAAAGAAG CCGGCCA TGC CGGCCGG GCTCCAATGCTTCAG Dole_0240 266668 - 268929 + | ATPase central domain-containing protein TERM 478 269437 - 269421 - g 70 -3.6 -4.61231 | overlap 269422 CGATATCCTGAAAAA GGTCGG CAAAT CCGACG CCTGGGACCTGGTCG TERM 479 269582 - 269599 + G 78 -9.1 -4.15543 | opp_overlap 269571, overlap 269578 269593 269595 ACAACCAATATGTCC GGTCCGG AGAC CTGGACC TTTTGGCCCTGTTTA TERM 480 269722 - 269707 - g 81 -3.9 -5.06816 | opp_overlap 269716, overlap 269710 ATCCGGCAACAAAAA GAGCC GGACGT GGCCC CGGGCGACCACTGCT TERM 481 270157 - 270143 - g 78 -3.4 -5.08824 | overlap 270145 TTTCCACCGAAAAAA CAGACC CCC GGCCGG CCTTTATTGAAAAAC TERM 482 270389 - 270377 - g 76 -4.7 -4.72986 | opp_overlap 270377 CAGCCTCATTAAAAA GCGTG CTC CCCGC CTTTGTGCCCCACAT Dole_0241 269095 - 270585 + | hypothetical protein TERM 483 270590 - 270601 + T 76 -7.2 -4.41047 | GGCTGGTGTAATCTT CCGG CTTG CCGG TTTTCCTTGGCCCAT Dole_0242 271938 - 270853 - | hypothetical protein Dole_0243 273219 - 272158 - | hypothetical protein TERM 484 272672 - 272653 - G 78 -6.4 -4.57073 | CACCTGCTTGAAAAA CGACTGAG AGGT CTCAACCG TGGGATCATAGTCAA TERM 485 272962 - 272994 + g 100 -9.4 -4.89852 | gap 2, overlap 272951 272962 272963 TTGCTTGCCGTCTTC G--GCAGTATGTGCAA ATT TTGCACATACTGCATC TTTTTCTAACTCTCC TERM 486 272962 - 272992 + g 100 -15.6 -4.06785 | overlap 272951 272962 272963 TTGCTTGCCGTCTTC GGCAGTATGTGCAA ATT TTGCACATACTGCA TCTTTTTCTAACTCT TERM 487 272963 - 272991 + g 100 -19.1 -3.02986 | overlap 272951 272962 272962 TGCTTGCCGTCTTCG GCAGTATGTGCAA ATT TTGCACATACTGC ATCTTTTTCTAACTC Dole_0244 274013 - 273252 - | hypothetical protein TERM 488 273411 - 273393 - G 70 -4.4 -4.41206 | opp_overlap 273394, overlap 273394 AAGGAGGGCATAAAA GCGGTCGC TGT GCGACGGT TCAATCAGGTGGGCC Dole_0245 277126 - 274010 - | HsdR family type I site-specific deoxyribonuclease TERM 489 274326 - 274338 + g 85 -3.3 -5.40072 | overlap 274318 ATATTTTTCCCAGGC TGCCC CTT GGACA TTTTTTTAACCAGGG TERM 490 275279 - 275255 - G 71 -10.7 -3.53444 | GGAGGGGGCGTCAAA CCCGGTCAGCA GTT TGCTGACCACG ATCAGCAGCTTGCAG TERM 491 275645 - 275658 + g 77 -2.3 -5.08601 | GCTCATCAGCTTTTC CATGG TGGC CCAGG TTTTTCTTACAATGG TERM 492 275677 - 275693 + g 86 -3 -5.5208 | overlap 275678 TTCTTACAATGGCCT TCTGAA AATTG TTCAGG TTTTTTGTCTTCTGC TERM 493 276346 - 276359 + g 75 -3.7 -4.82901 | AACCGAAATACTGAT GGGGC CGGG GCACC TTTTTCTGCCCGGCA Dole_0246 279092 - 277119 - | hypothetical protein TERM 494 277214 - 277198 - G 79 -7.2 -4.67123 | overlap 277199 GTAAAACAACGAAAA CCGGCC TGACT GGCCAG GGCGATGGTGGCGGG TERM 495 278672 - 278682 + g 87 -8.2 -4.72272 | TGAATTTACCCAATC CGGC GGA GCCG TTTTTCATCAACCCG Dole_0247 281609 - 279465 - | hypothetical protein TERM 496 280610 - 280626 + g 75 -3.7 -4.7497 | CGTTGCCTCCCTTGT TCTTCAG CTT CTCAAGA TTTTTGATGCATGCC Dole_0248 283453 - 281606 - | hypothetical protein TERM 497 282836 - 282851 + g 72 -4.8 -4.58283 | opp_overlap 282847 TACCAGCAGTTTTGT TTTTGT AAGT ACAAAA TTTTTGAGACCATTC TERM 498 283021 - 283037 + g 75 -3.7 -4.7373 | GGATGGCCTTCTCTT TTGTGGT GTC AACACAA TTTTTAATCAGATCA TERM 499 283272 - 283282 + g 74 -6.8 -4.40358 | TATTCTTTTGCGCCG GCCT TCC AGGC TTTTATCAAATCGCT Dole_0249 284631 - 283450 - | restriction modification system DNA specificity subunit TERM 500 284014 - 284035 + g 72 -4.4 -4.59773 | gap 1, overlap 284007 284006 284014 284015 GAGGAGTTGCTGCAT G-GCGGCCT GTTTG AGGTCGCGC TTTTTGGCGATCAGC Dole_0250 285779 - 284628 - | putative transcriptional regulator Dole_0251 288202 - 285776 - | type I restriction-modification system, M subunit TERM 501 286564 - 286579 + g 80 -2.4 -5.24129 | CAATGGCCTCGATCA GGGCTC TGGG GTGTCC TTTTTTGTCAAAGCC TERM 502 287628 - 287647 + g 75 -5.6 -4.56775 | opp_overlap 287644 CAGGTCGGGTCATAG GCCGTGGT GGAA GCAACGGC TTTTTGCGGCGAAAT TERM 503 288620 - 288638 + H 72 -6 -4.45771 | opp_overlap 288612, overlap 288612 288621 AAAAAGCCGGAGTTA TGTTCCGT GCT ATGGAACG TTTCTGTTTTAGGGT TERM 504 289278 - 289259 - g 70 -2.1 -4.71828 | opp_overlap 289259 289262, overlap 289254 289262 ACGCCAGGAAGAAAA CGAGGTA CAGAGC TACCTTG TTTCCCCGCCATCCC Dole_0252 288729 - 289730 + | hypothetical protein Dole_0253 289727 - 290275 + | cell division GTPase-like protein Dole_0254 290333 - 290890 + | hypothetical protein TERM 505 291227 - 291272 + G 83 -4.6 -5.10933 | gap 2, opp_overlap 291227, overlap 291254 TGAAATCGCACGAAT GGGCAG-G-GACCTGGGCGCCA TCAC TGTGGCACTGGTCACACTGCCC TTTTCTTTTGAATCA Dole_0255 290877 - 291491 + | tubulin/FtsZ GTPase TERM 506 291697 - 291678 - g 76 -2.8 -4.95487 | gap 1, overlap 291680 AAAATAAAGACAAAA CA-GCCGGT ATA ATCGGCATG TGGCAGGAACGGTTC Dole_0256 291527 - 292033 + | hypothetical protein Dole_0257 292089 - 292511 + | hypothetical protein Dole_0258 292508 - 293143 + | hypothetical protein Dole_0259 293145 - 294113 + | hypothetical protein TERM 507 294451 - 294466 + G 77 -2.5 -5.03314 | gap 1, opp_overlap 294438, overlap 294452 CACGGCCGACCTGAT C-GGCG CTATC CGCCTG TTTTTTCCGGATCAG Dole_0260 294125 - 295450 + | beta-lactamase domain-containing protein TERM 508 296000 - 296015 + G 84 -2.4 -5.40072 | overlap 296001 GCCGGTTGGCCACTA TCGCCC AGCA GGACGG TTTTTTTCACAAACC TERM 509 296073 - 296059 - g 79 -5.6 -4.84359 | opp_overlap 296068 GCATTGCTACAAAAA CACGCC AAA GGCCTG ATCGGTCTGTCTGCC TERM 510 296764 - 296751 - g 70 -4.5 -4.42748 | GTATGCTAAAAACAA CGGTA TCCT CACCG GCCCGGGCCGGGGAT TERM 511 297417 - 297436 + G 71 -10.6 -3.55444 | opp_overlap 297417 297414 ACTGATAAAGAACCA GGGCCGGC AAAC GCCGGACC TTTCCCGGATAGACA TERM 512 298359 - 298317 - g 74 -7.7 -4.10855 | opp_overlap 298318, overlap 298327 AAAAGCTCTTGAAAA CCTGGTCAAAGCCGGTGC-GT TTG ACAGCACCGGCGCC-ACCCGG TCGCAAATGATGGCA TERM 513 298350 - 298327 - g 81 -13.2 -3.57309 | gap 1, opp_overlap 298318, overlap 298317 GAAAACCTGGTCAAA GCCGGTGC-GT TTG ACAGCACCGGC GCCACCCGGTCGCAA TERM 514 298524 - 298493 - g 76 -3.5 -5.00616 | opp_overlap 298515 298520 GGGCCCTTGAAAAAA GGGCGATGGGAAT CTGTTT AACCCCGGCGCCC CCGGCATATTGTCAT TERM 515 298771 - 298728 - g 70 -12.4 -2.71924 | gap 1, overlap 298727 298731 CATTCCGGCTGAAAT TTACGAGTCTGCCCGGCACGC CTT GC-TGCCGGGCAGGCCGGTCA TCGTGGAAGGTCGCT TERM 516 298767 - 298731 - g 81 -15.2 -2.64155 | gap 2, overlap 298728 298727 TCCGGCTGAAATTTA CGAGTCTGCCCGGCACGC CTT GC-TGCCGGGCAGGC-CG GTCATCGTGGAAGGT TERM 517 298909 - 298885 - g 70 -4.1 -4.63089 | opp_overlap 298885 CAGGGCAAAAAAGAA GACTTGCCCCG CAG CCTGGCATGTC CTTTTTGCGGCCACG Dole_0261 295666 - 299319 + | DNA polymerase III, alpha subunit TERM 518 299434 - 299444 + G 74 -6.8 -4.30987 | opp_overlap 299434 CAACCCGAACTATAA GTCG CTG CGAC TTTCTTCTGAACGCT Dole_0262 299412 - 300380 + | hypothetical protein Dole_0263 300938 - 300384 - | GCN5-related N-acetyltransferase Dole_0264 301667 - 301074 - | hypothetical protein TERM 519 301459 - 301442 - G 82 -10.5 -4.21936 | GCCACAACCGCAAAA GGACGCC GATG GGCGCCC GGTGGCCGCCCATGT TERM 520 301784 - 301802 + H 81 -9.6 -3.97636 | AGGAAAGTGGTTTTG CGTTCCGT TTT ATGGAACG TTTCTGAGTTACGGT Dole_0265 302163 - 303782 + | ADP-ribosylation/crystallin J1 TERM 521 303919 - 303940 + T 100 -12.3 -5.68438 | AGCCACAACATCCGA GGCAGCAGG AATC TCTGCTGCC TTTTTTATTTGATAC Dole_0266 305339 - 304254 - | amine oxidase TERM 522 305524 - 305548 + H 70 -10 -3.17714 | opp_overlap 305542, overlap 305527 TGCACCCCTCGTCAC TGCGGCGTAC GACAA GTACGCCTCA TTCCTCGGGATTTGC TERM 523 305527 - 305545 + H 71 -10.3 -2.78395 | opp_overlap 305542, overlap 305524 ACCCCTCGTCACTGC GGCGTAC GACAA GTACGCC TCATTCCTCGGGATT TERM 524 305676 - 305658 - H 80 -3 -5.45802 | overlap 305660 TTCTGAAAAGAAAAA TGCGGTAG TGT CTCCGGCA TAAAATTTTTATTGG TERM 525 306014 - 306003 - g 71 -7.2 -4.24002 | overlap 306004 GCCGAAAGCGGAAAA GCCG GCAC CGGC GACCCCGGCCCAACA TERM 526 306098 - 306064 - g 86 -12 -4.07885 | opp_overlap 306081 306082 GAGGCCCCGGCAAAA CCGGCCCCTGCGGC CCCTGCC GCCGGTGAGGCCGG TGACGTTATTGAAAT TERM 527 306343 - 306322 - g 72 -6.5 -4.39828 | gap 1, opp_overlap 306335, overlap 306300 306323 AAGACCCCGAGAAAA CCGGCCGGAA TTT CCCCGGC-GG AGTGGGACGCCATGC TERM 528 306427 - 306411 - g 87 -15.1 -3.31461 | overlap 306393 CATCGACTGCCACAA GGCCGGC GGC GCCGGCC CGGTGAAATGCACGG Dole_0267 305854 - 306462 + | hypothetical protein TERM 529 306573 - 306533 - f 100 -15 -5.86061 | gap 1, opp_overlap 306541, overlap 306541 TGCCAGGAAAAAAAA GCA-AAAAAGGACAGCAGG GCCT CCTGCTGTCCTTTTTGTTC CGTCAGGGCCACATC TERM 530 306541 - 306564 + F 100 -16.8 -5.10461 | opp_overlap 306533 306541 AAAAAAAGCAAAAAA GGACAGCAGG GCCT CCTGCTGTCC TTTTTGTTCCGTCAG TERM 531 306564 - 306541 - f 100 -16.8 -5.62552 | opp_overlap 306541, overlap 306533 AAAAAAAGCAAAAAA GGACAGCAGG GCCT CCTGCTGTCC TTTTTGTTCCGTCAG TERM 532 306768 - 306780 + G 83 -5.5 -4.96501 | AGGGGTTTTAAGCCT GGTCA TTC TGGCC TTTATTTTTCTGGGC Dole_0268 306709 - 308604 + | PpiC-type peptidyl-prolyl cis-trans isomerase Dole_0269 308652 - 308903 + | hypothetical protein Dole_0270 308974 - 309252 + | hypothetical protein Dole_0271 309555 - 310406 + | 3-hydroxybutyryl-CoA dehydrogenase Dole_0272 310421 - 310597 + | hypothetical protein Dole_0273 311600 - 310875 - | integral membrane protein TerC TERM 533 311241 - 311223 - G 87 -3.7 -5.48825 | opp_overlap 311226, overlap 311224 311226 TACCACGGAAAAAAA GGAGGGC GCGAT GCCGCCC TTTCGTTCCGCGTGC TERM 534 311687 - 311664 - H 79 -2.4 -5.42514 | gap 1 TCAGAAACCAAAAAA GGGGC-TCGTT GTA AACGATAACCC CTTGTTTTTATTTTG TERM 535 312121 - 312111 - H 75 -5.4 -4.66609 | overlap 312113 CATTTTATTCAAAAA TTGC TTG GCAA AAGCCCTATTATATT Dole_0274 312270 - 314300 + | radical SAM domain-containing protein TERM 536 315029 - 315006 - g 81 -3.9 -5.03994 | opp_overlap 314985 314983 GCTGATATAGAAAAA GCTATTGAG TTAAAT CCCAATAAC AAGGATGCCTATTTA TERM 537 315366 - 315333 - g 80 -2.5 -5.30686 | opp_overlap 315335 315337, overlap 315335 315337 AATACTGACAAAAAA GATATATTCCTCTAT TTGT ATAGAGGCATATCTT ATATGGAAAAGGGAG Dole_0275 314319 - 316082 + | TPR repeat-containing protein TERM 538 316599 - 316588 - g 77 -2.2 -5.12707 | TTAAACGGCAAAAAA GACG AAAT CATC GACACATACAAAAAG TERM 539 317572 - 317587 + G 70 -2.4 -4.86731 | CTGGAGGCCATTGTG GCCCTG CCCA CGGAGC TTTTCTTTAACACCG Dole_0276 316441 - 318150 + | N-6 DNA methylase Dole_0277 318150 - 319391 + | restriction modification system DNA specificity subunit TERM 540 320336 - 320355 + G 78 -6.4 -4.56597 | overlap 320347 AATTCTATTGCATGG CTGGCC CATCATCT GGCCAG TTTTTACAAAACCAG TERM 541 321104 - 321093 - g 78 -3.6 -5.00884 | ATTTTCTGGAAAAAA CAGC CAAT GCCG TCCAGGGAAAGGGCC Dole_0278 319388 - 322357 + | hypothetical protein TERM 542 322990 - 323006 + G 75 -3.7 -4.84359 | TCGTAAATTGATGGC GTTTGAC CGC GTTGAAC TTTTTGTAAACGTAA TERM 543 323202 - 323192 - g 74 -6.8 -4.34947 | opp_overlap 323191 AATACAGGAGCAAAA TGGG CAA CCCA CATTCGTATGCTTGG Dole_0279 322487 - 323608 + | hypothetical protein Dole_0280 323605 - 324348 + | Gp37Gp68 family protein TERM 544 325147 - 325159 + F 73 -3.5 -4.83615 | AAACCGAGTAACCCG TTTTA GCG TAAAA TTTTTATCCACAATC TERM 545 325380 - 325412 + F 100 -11.3 -4.66537 | gap 1, opp_overlap 325380 ACAAGCCAGTAGAGA GGGCAGTCGCCGGT TTTACC GCCGG-GGCTGCCC TTTTGTGTTGGGGGC TERM 546 325449 - 325476 + F 100 -9.1 -4.87318 | AGCCTCCCGATGTCA GCCTGGTGAGC CCTGAT GCTTGCCGGGC TTTTTGCGTTTTAAC TERM 547 325868 - 325843 - g 72 -4.5 -4.57569 | opp_overlap 325843, overlap 325828 325844 GGATGCCCTGAAAAA GGCGGCCACGC TGCT GGGTGTCGGCC TTCATATCTATGGCG Dole_0281 325517 - 326140 + | hypothetical protein TERM 548 326170 - 326195 + F 100 -11.2 -4.87318 | opp_overlap 326170 ACCCACGCATGAAAA GGGAAAGGCC GGCACG GGTCTTTCCC TTTTTGCGTTTTCAA TERM 549 326195 - 326170 - f 80 -9 -4.28548 | opp_overlap 326170 ACCCACGCATGAAAA GGGAAAGGCC GGCACG GGTCTTTCCC TTTTTGCGTTTTCAA TERM 550 326539 - 326526 - g 70 -3.7 -4.59773 | overlap 326527 326529 GGTCATTTTCAAAAA GGACC TGCC GGACC GGAAGGCAGCCGTCG TERM 551 326775 - 326759 - g 75 -4.3 -4.77165 | overlap 326762 TGGTTGACAACAAAA CAGCGGC CAG GCCAATG GCACAAGGCACCGCA TERM 552 326912 - 326902 - g 81 -3.2 -5.22039 | CGGAAACTGAAAAAA CCCA AGC TGGA GCAGGTAAACACCAC Dole_0282 326227 - 327066 + | hypothetical protein TERM 553 327094 - 327130 + F 78 -5.1 -4.86731 | gap 1, opp_overlap 327082 327075 327095, overlap 327095 CAAGAAAAGCGAGAA CGCCCTTCTGTGAGCC CGTCAC GGCTT-CAGGGGGGCA TTTTATTTCAGGGGA TERM 554 327361 - 327373 + G 86 -4.7 -5.27206 | opp_overlap 327361 GGCTCTTGTCCAACA GGCTC CGG GTGCC TTTTTCTTATCTGTC Dole_0283 327183 - 328139 + | hypothetical protein TERM 555 328158 - 328195 + F 100 -14.9 -4.56597 | opp_overlap 328157 328158, overlap 328160 TCATCAACAATCAAC CCGGAAGCCCAGTCATC AAAA GGTGGCTGGGCTTTCTG TTTTTACGGAGAACA TERM 556 328160 - 328193 + F 100 -16.1 -3.90048 | opp_overlap 328158 328157, overlap 328158 ATCAACAATCAACCC GGAAGCCCAGTCATC AAAA GGTGGCTGGGCTTTC TGTTTTTACGGAGAA Dole_0284 328213 - 328404 + | hypothetical protein Dole_0285 328431 - 328598 + | hypothetical protein TERM 557 328892 - 328877 - f 85 -4.6 -5.40072 | overlap 328878 GCCTGTTGAAAAAAA TCCAGG AGAA CCTGGC AGAGGGTTTCACCCT TERM 558 328891 - 328878 - f 70 -8.1 -3.83561 | overlap 328877 CCTGTTGAAAAAAAT CCAGG AGAA CCTGG CAGAGGGTTTCACCC TERM 559 329005 - 328992 - g 72 -9.5 -3.64703 | opp_overlap 328996 TTTCGCCCATTCAAA CCCGG TTGA CCGGG GTCACCTTTGATGAT TERM 560 329272 - 329251 - g 75 -3.8 -4.84359 | gap 1, opp_overlap 329254, overlap 329254 TGAGGCTTATAAAAA TAT-CGGAC TGACG GTCCGTATA GTGGAGGCCACTGAA Dole_0286 328964 - 329290 + | HIRAN TERM 561 330212 - 330225 + G 84 -2.3 -5.40072 | CTTCTACAGCGTTTC TGGTC TGAA GCCCA TTTTTTTGAAAAAGA TERM 562 330808 - 330796 - g 72 -6.3 -4.40804 | CATCAGGCTACAAAA TATCG ATT CGATA ATAATGAACGCCATT Dole_0287 329447 - 330964 + | hypothetical protein TERM 563 332096 - 332086 - g 73 -3.2 -4.84359 | GTATGTGTATAAAAA GGAC GGC ATCC CGAAGACCAAAAAGT TERM 564 332496 - 332486 - g 70 -2.4 -4.74103 | TCCGTAACGCAAAAA CAGG ATG CCGG GAGTGCAGGTGAGAT Dole_0288 331373 - 332584 + | integrase family protein TERM 565 332600 - 332577 - T 100 -5.3 -5.65177 | opp_overlap 332579 ATAGGCATAAAAAAA GAGGCTAGA TTTTAT TCTAACCCC TTGTTTTTATTTTGG Dole_0289 333066 - 332755 - | hypothetical protein TERM 566 332824 - 332835 + g 72 -5.8 -4.54727 | opp_overlap 332820 ATTTGGAGACAGGGC GAGG CACA CCTC TTTTCGTTTGGAGGC TERM 567 332970 - 332995 + g 70 -3.9 -4.56597 | TCTTGATCTTCAGGG CGTTGTCGTGG GCCC CCACCACCATG TTTTTCGAGGAGCGG Dole_0290 333672 - 333067 - | phosphoserine phosphatase Dole_0291 335011 - 333695 - | homoserine dehydrogenase TERM 568 334033 - 334019 - G 71 -12.8 -2.60075 | overlap 334018 GGGCCGGTAAGCAAG GGCCGG AAT CCGGCC AGGGGCCCCGAACAC Dole_0292 336196 - 335021 - | aminotransferase class I and II TERM 569 335147 - 335122 - G 79 -13.3 -3.17194 | gap 1, opp_overlap 335113 ACTCGCCGAATCCAA GGCCC-GGTGAC ACC GCCACCTGGGCC TCGCGGATCATCATT TERM 570 335174 - 335194 + g 78 -6.7 -4.60924 | CATTTTGGAAAACTC CACCGACCC CAG GTGCCGGTG TTTTTCCGGAATTTG TERM 571 336677 - 336641 - g 76 -4.9 -4.79657 | overlap 336642 ACAACATCAAGAAAA TCGCCAAGCAGACCCGG CGG CAGGGGGTGATGGGCGA CATCGGCGGGTTCGG TERM 572 336852 - 336867 + G 84 -3.9 -5.26316 | CGATATTGCCGTCCA GGGCG CAAAAC CGCTC TTTTTTCTGGACTAC Dole_0293 336565 - 337605 + | phosphoribosylformylglycinamidine cyclo-ligase Dole_0294 337944 - 339026 + | metalloendopeptidase glycoprotease family TERM 573 339014 - 339037 + T 75 -11.7 -2.67171 | overlap 339013 339011 CGCCGATGTCTATTC CCGGGTGGC TTAGCC GTCACCCGG ATGTTTCATGCAATA TERM 574 339266 - 339284 + T 100 -16 -3.05384 | opp_overlap 339242 339239 CTTGGCCTCTGGCTC GCCACGCC ACA GGCGTGGC TTCCCTCGCGCAAAC TERM 575 339392 - 339375 - T 70 -2.5 -5.00616 | overlap 339376 339377 TTGTTCCTGAAAAAA GCGCCCG CGCT CGGCTGC GCTGCAACGGGCGGG TERM 576 339544 - 339531 - T 79 -9.5 -3.81755 | ATGCGGCAAAGATAA CGGGC CTTG GCCCG CAGAATCCGCTCCAC Dole_0295 340543 - 339512 - | Beta-N-acetylhexosaminidase TERM 577 340006 - 340019 + g 83 -5.2 -4.90455 | overlap 339999 GAAAGTGCTTGCCCA CGGC CATTAT GCCG TTTTTCTGCATCTCT Dole_0296 341374 - 340580 - | hypothetical protein Dole_0297 342242 - 341403 - | FkbM family methyltransferase TERM 578 341871 - 341881 + g 83 -4.6 -5.14563 | CACGGGAAACACCAG CCGG CCT TCGG TTTTTTGCTCCCCCA TERM 579 342118 - 342128 + g 100 -5.4 -5.86965 | TCAAGCAGGTCGATT TCGT AGA ACGA TTTTTTTTCATCAAT TERM 580 342346 - 342332 - H 71 -7.2 -4.07859 | TCAAGAAACATGAAA TCAACA GGA TGTTGA TAAAATGTTGATAAC TERM 581 342408 - 342395 - H 85 -4.5 -5.36364 | TTAAAAATATAAAAA CGAAC TATA GTCCG GTTGAAAAACTGCGC Dole_0298 342744 - 343412 + | hydrogenase accessory protein HypB TERM 582 343567 - 343547 - g 78 -3.9 -5.00616 | TTCTGGCTGAAAAAA CCCTGAC GCCTCCG GACAGGG AGCCCTGCGGTGCCA TERM 583 343956 - 343972 + G 78 -11.5 -3.65351 | GTTCACGGTCCAGGC GGCCCGG GAC CTGGGCC TTTCCGTCAAGGTGG Dole_0299 343453 - 344301 + | hypothetical protein TERM 584 344698 - 344681 - g 72 -4.7 -4.56597 | opp_overlap 344667, overlap 344683 344684 TCGGCCCCGGAAAAA CAGGCCG TTTC CGACCGG CTCACCCCCTACAAC Dole_0300 344402 - 345388 + | iron-sulfur cluster-binding protein Dole_0301 345388 - 345852 + | hypothetical protein TERM 585 345965 - 345987 + T 100 -10.5 -5.22289 | opp_overlap 345965 GTCCCAATAAAAAAA GCCCCCCCT TTATC AGGAGGGGC TTTTTGTCTTTCATG TERM 586 345987 - 345965 - T 100 -12.7 -5.7946 | opp_overlap 345965 GTCCCAATAAAAAAA GCCCCCCCT TTATC AGGAGGGGC TTTTTGTCTTTCATG Dole_0302 347349 - 346015 - | hypothetical protein TERM 587 346532 - 346544 + g 85 -3.3 -5.47399 | overlap 346519 AAGGCATGGCCACAC TCGCC CAT GACGA TTTTTTTGACCTTGA TERM 588 346979 - 346945 - G 71 -7.1 -4.10657 | gap 2, overlap 346946 GCACAGGTGGCAAAA GCGACG-GGCC-ACCAG CAT CAGGTAGGCCACGTCGA TACCAAAGGGGCAGT Dole_0303 348076 - 347399 - | hypothetical protein TERM 589 347593 - 347580 - G 85 -2.3 -5.50499 | TGATAGGCAAAAAAA CCGGT GACA AACGG GGCCGCCGTGATCAG TERM 590 347631 - 347650 + g 70 -4.2 -4.60255 | overlap 347633 ACATAGTCCGACGGG GTGGTCAG GTAC TTGACCTC TTTTTGCACGATTCT Dole_0304 349361 - 348093 - | hypothetical protein TERM 591 348124 - 348138 + g 75 -8.6 -4.07568 | overlap 348107 ACCGGCACCACGCGC CGGAAA TAC TTTCCG TTTTCCACACACCGG TERM 592 348670 - 348650 - G 84 -6.8 -4.7373 | TGACCGGATGAAAAA TCGGCTCC CACAC GCAGCCGA ACACCTTGTCCCAGG TERM 593 349044 - 349030 - G 75 -5.6 -4.62069 | CCGTCAGTGGAAAAA CGGGTG TCC CACACG TAGTCAAAACTTTCC Dole_0305 350103 - 349426 - | cytochrome c class III TERM 594 349957 - 349931 - G 75 -5.7 -4.56597 | overlap 349932 GTGTCGTGGTAAAAA CGCACCACCGG GCGCT CCAGGGGCGCA AACGGCTGCATCGCG TERM 595 351409 - 351421 + G 72 -9.1 -3.84451 | CATCGTCTCCGGCGG CCCCA TGA TGGGG TTTGCCTTTACCGAC Dole_0306 350375 - 351739 + | electron transport complex, RnfABCDGE type, C subunit Dole_0307 351770 - 352783 + | electron transport complex, RnfABCDGE type, D subunit TERM 596 352846 - 352836 - g 75 -4 -4.79667 | AAAATCTATGAAAAA CAAT TAC ATTG TTCAGGCATGGCTGG TERM 597 352864 - 352876 + G 76 -3.3 -5.00616 | CAGGCATGGCTGGTG CTGCT GCT GGCGG TTTTTTACGGCGGGG TERM 598 353292 - 353274 - g 73 -3.1 -4.82901 | gap 1, overlap 353287 GTTTCTTCAGAAAAA GACC-GAC AAAA GTCTGGCC GTGGTAAAGACCGGG Dole_0308 352828 - 353427 + | FMN-binding domain-containing protein TERM 599 353907 - 353943 + G 70 -2.2 -4.74706 | gap 1, overlap 353911 CCTGGCCCTGGCCAG CATCGCCACCGTTCGGG AGAT CCTGGGCACTGGC-ATG TTTTTCGGTCTTCCC Dole_0309 353467 - 354090 + | RnfA-Nqr electron transport subunit Dole_0310 354109 - 354876 + | RnfA-Nqr electron transport subunit TERM 600 354991 - 355003 + G 82 -9.1 -4.53303 | CTACATACTGGGCTG GGCCA ACG TGGCC TTTTATGTGGAGGTG Dole_0311 354914 - 355825 + | electron transport complex, RnfABCDGE type, B subunit TERM 601 355882 - 355858 - f 100 -13.5 -5.72622 | opp_overlap 355858 TTCATAAACAAAAAA GCCCCCCTGCA AAA CGCACGGGGGC TTTTTGTTTTGACAA TERM 602 355858 - 355882 + F 100 -12.8 -5.45802 | opp_overlap 355858 TTCATAAACAAAAAA GCCCCCCTGC AAAAC GCACGGGGGC TTTTTGTTTTGACAA Dole_0312 356308 - 356538 + | hypothetical protein TERM 603 357872 - 357886 + G 81 -4.2 -5.0666 | overlap 357873 AGGGTACGCTCGGTG CTCCAG CGC CTGGAC TTTCTTTTTTGCGTG TERM 604 358455 - 358438 - g 74 -2.5 -5.00616 | overlap 358439 CTCCCTGCGAAAAAA GGCACCG GACC CGGAGCT TCAGATTCATCCGGA Dole_0313 356639 - 358735 + | molybdopterin oxidoreductase TERM 605 359061 - 359048 - T 71 -3.1 -4.84017 | AATGTGCTAGAAAAA CCAAT TTTA ACTGG ACCCCGGGGCGGTGC TERM 606 359203 - 359167 - T 100 -14.5 -4.60924 | opp_overlap 359170, overlap 359170 TAAAGGTGCGAAAAA CAAGAGCCCGAACAGCA GGT TCCTGTCCGGGCTCTTT TCTCTTGGAAGCGTT TERM 607 359170 - 359200 + T 100 -14 -4.66537 | opp_overlap 359167 359170 AGGTGCGAAAAACAA GAGCCCGAACAGCA GGT TCCTGTCCGGGCTC TTTTCTCTTGGAAGC TERM 608 359200 - 359170 - T 100 -16.2 -4.40963 | opp_overlap 359170, overlap 359167 AGGTGCGAAAAACAA GAGCCCGAACAGCA GGT TCCTGTCCGGGCTC TTTTCTCTTGGAAGC Dole_0314 361020 - 359227 - | AMP-dependent synthetase and ligase TERM 609 359326 - 359350 + g 78 -4.1 -4.98616 | CAGGCCGTTGTCAAT GGTGAACTCCG GCA CGATGGTCACC TTTTTGATGTTTTCA TERM 610 359368 - 359383 + g 71 -6.8 -4.17048 | opp_overlap 359368 TTTGATGTTTTCAAA CGAGGC AAAG GCCTTG TTCTTTTCCGCCACC Dole_0315 361930 - 361148 - | TatD family hydrolase TERM 611 361228 - 361242 + g 70 -4.2 -4.56597 | opp_overlap 361238 361240, overlap 361230 361238 TTTTAATGGCGGCAA GGGTGT CAA ACACGC TTTTTACAAAGGCGG Dole_0316 362111 - 362950 + | ferredoxin--NADP(+) reductase subunit alpha TERM 612 363023 - 362985 - g 100 -5.1 -6.06529 | overlap 362992 362993 GATACAGAAAAAAAA GAGAAAACGCCCCGGCA GCCCA TGCCGGAGCAGCCGCCC AAAGTACGGGCGAAA TERM 613 363016 - 362992 - g 100 -11.4 -5.14525 | overlap 362985 362993 AAAAAAAAGAGAAAA CGCCCCGGCA GCCCA TGCCGGAGCA GCCGCCCAAAGTACG TERM 614 363015 - 362993 - g 81 -12.7 -3.63225 | overlap 362992 362985 AAAAAAAGAGAAAAC GCCCCGGCA GCCCA TGCCGGAGC AGCCGCCCAAAGTAC TERM 615 363314 - 363300 - g 83 -5.6 -5.00884 | overlap 363302 ATTCTCGGCAAAAAA GGCGAC CCC GTGGCC ATCGGCAACCTGGAG TERM 616 364273 - 364240 - g 77 -2.4 -5.14563 | TGGCCGATGAAAAAA CCGG-CAAAACCACCC GGAA AGG-GGTCTGGGCCGG GGGTGACATCGTCAC Dole_0317 362964 - 364373 + | glutamate synthase (NADPH), homotetrameric TERM 617 364563 - 364523 - T 100 -22.8 -3.14881 | opp_overlap 364523 GAAGCCGGGTATGAA CAGTGCCCGCCTGAAG TCTCAAGCG CTTCAGGCGGGCACTG TTTTTTTTACGATTC TERM 618 364523 - 364563 + T 100 -23.5 -5.81032 | opp_overlap 364523 GAAGCCGGGTATGAA CAGTGCCCGCCTGAAGT CTCAAGC GCTTCAGGCGGGCACTG TTTTTTTTACGATTC Dole_0318 364887 - 364570 - | NifU domain-containing protein TERM 619 364951 - 364928 - H 73 -5.3 -4.65916 | overlap 364929 GCCATTTCAAGAAAA GTTCTGGAG TGGTCG CTCCAGAAA TCAAACGGCTTTGCC TERM 620 364967 - 364957 - H 77 -8.2 -4.13995 | overlap 364953 GCTCCAGAAATCAAA CGGC TTT GCCG GCGCTGAATCTATTT Dole_0319 365131 - 365466 + | hypothetical protein TERM 621 365514 - 365558 + T 85 -10 -4.34008 | gap 1, overlap 365511 TCTGCGTCAAACTGC GGGCTTCATTGTGCGGCGTAC AACA GTACGCCTC-CGCTGAACCCC TTGTTTTCCTTGATC TERM 622 365783 - 365759 - T 70 -10 -3.17714 | overlap 365762 GCAAATCCCGAGGAA TGAGGCGTAC TTGTC GTACGCCGCA GTGACGAGGGGTGCA TERM 623 365780 - 365762 - T 71 -10.3 -2.78395 | overlap 365759 AATCCCGAGGAATGA GGCGTAC TTGTC GTACGCC GCAGTGACGAGGGGT Dole_0320 366351 - 365851 - | hypothetical protein TERM 624 366007 - 365967 - G 89 -16.8 -3.05384 | gap 1 GCCCGTCCGAGGCAA CGGCCCGGACACGGGCGGT GGCC ACCACCCGGG-CCGTGCCG GCCCCGGAAAATTCA TERM 625 366239 - 366250 + g 70 -3.6 -4.57073 | AGCTCTTTTTCAATG GCGG TCAT TCGC TTTTTGACGGCCCTG Dole_0321 366842 - 366345 - | signal peptidase I TERM 626 366553 - 366535 - G 89 -6.6 -5.13722 | opp_overlap 366547 TCCACGAAAAGAAAA CCGTTACG GAA CGCCACGG CCTGGCCTTTCGTTG TERM 627 367139 - 367161 + G 71 -6.9 -4.10161 | CTGACATGCCTGTGC CTGGTCGGC TTTCT GCTGGCCGG TTTTGCCGGATGCTC TERM 628 367570 - 367603 + G 70 -2.3 -4.77165 | gap 1, opp_overlap 367579 AGAAAAAAAACTGGC CACGGTA-AAGCCCCC TGT GGAGACCTATGCCGTG TTTTATTATGAAGAC Dole_0322 367112 - 368317 + | TPR repeat-containing protein TERM 629 368376 - 368320 - f 100 -20.4 -4.25104 | gap 1, opp_overlap 368327 368335 CGGCGGCCATTAAAA TATTGACGATCAGGCGGTCCCGGTCCT TTTC AGGATCGGAACCGCCTGATC-CCTATA GCCCCGACCGGGGCT TERM 630 368383 - 368401 + F 73 -2.2 -5.1417 | overlap 368377 368384 ATCCCTATAGCCCCG ACCGGGGC TGT GTCACGGG TTTTTAATTTTATAA TERM 631 369021 - 369044 + G 75 -5.8 -4.56597 | GACGCCCTGGAGTCG GGTGACGGCC GGGG GGCGGACGCC TTTTTCAAAAAAGCG Dole_0323 368475 - 369113 + | TPR repeat-containing protein TERM 632 369139 - 369123 - T 76 -9.5 -3.7398 | opp_overlap 369138, overlap 369121 369137 TTGTAACTTAAAAGA GCGTTTA TTT TAAACGC CATTGCGCCTGTCCG Dole_0324 369853 - 369395 - | phosphodiesterase TERM 633 369957 - 369945 - H 73 -7.7 -3.97636 | opp_overlap 369945 369944 ATTTCAATCCATAAA CCGAA CGT TTCGG CTGTTTGTCAAGTCA TERM 634 370074 - 370050 - H 70 -10 -3.17714 | overlap 370053 GCAAATCCCGAGGAA TGAGGCGTAC TTGTC GTACGCCGCA GTGACGAGTGGGTGC TERM 635 370071 - 370053 - H 71 -10.3 -2.78395 | overlap 370050 AATCCCGAGGAATGA GGCGTAC TTGTC GTACGCC GCAGTGACGAGTGGG TERM 636 370187 - 370173 - H 74 -2.7 -5.12617 | overlap 370176 CAAGTATGGAAAAAA CAGGC AGGCA GCCGG CAAAAAAGGGGTGAC TERM 637 370491 - 370534 + G 84 -7.2 -4.72272 | gap 1, overlap 370492 TTCACGGTCCTTGTG CTGGCCGGC-CTGGCCGGGGC CGC GGCCCTTCTGGTGCCGGCCAC TTTTTCGTCCGCCAC TERM 638 370732 - 370745 + G 76 -4.5 -4.85782 | gap 1 ACATCATCCATCACC CCG-GC CTG GCACGG TTTGTTTTTCACCGC TERM 639 370851 - 370870 + G 84 -4.2 -5.24129 | gap 1 ATGTACCTGCGTGAC CCCTCTCCG GCC CGG-GACGG TTTTTTCTGGGCAAC TERM 640 370962 - 370994 + G 81 -4.2 -5.08824 | gap 2, overlap 370966 TCCGGGGCCATTGTG GTGCTGCTGGTCTCCA TGG TGGAAACCGG--GCAC TTTTTTGCCTACCGG TERM 641 371185 - 371229 + G 75 -5.5 -4.56597 | opp_overlap 371164 371162 371195, overlap 371188 CGGCCCTCAAAAGAG CCGGGGGAAACGCCTACCGGT TCG GCGGGGAGGAGTTTACCCTTG TTTTTCCGGGAAAAG TERM 642 371188 - 371226 + G 77 -8 -4.40561 | opp_overlap 371164 371162 371195, overlap 371185 CCCTCAAAAGAGCCG GGGGAAACGCCTACCGGT TCG GCGGGGAGGAGTTTACCC TTGTTTTTCCGGGAA TERM 643 371348 - 371337 - g 87 -3.6 -5.4505 | overlap 371339 GCCCGGAAGAAAAAA GACG GCAG CGCC CCGGAAAAGGCAACG Dole_0325 370335 - 371519 + | diguanylate cyclase TERM 644 371541 - 371509 - T 71 -8.3 -3.78409 | GCAACCGAACCGAAA CCGCCCCATGACAAG CGC CATGTCAGGGGTCAG CGCAGGGCCGTGCCC Dole_0326 372149 - 371538 - | antibiotic biosynthesis monooxygenase TERM 645 371923 - 371890 - G 72 -5.1 -4.59424 | overlap 371891 AAATCGAAATCAAAA TCGGGATCGCTATCG GTAT CGGTATCGAACCCGT GTGCGGTGAATTTTA TERM 646 372657 - 372646 - H 71 -7.2 -3.98913 | TGGACAGCCAAAGAA CGCC TGAC GGCG TCACTACGAACCGGG TERM 647 373282 - 373268 - g 91 -7.1 -5.1861 | opp_overlap 373279 GTGAGCATCAAAAAA GGCGA CATTC TCGCC AACCTGCCGTTTCAT TERM 648 373919 - 373951 + G 78 -6.7 -4.56597 | CTTTCTCAATTTGAG GGCGGGGGCCACCGC GGG GCCGGGGCCTGCACC TTTTTGGCAGACAAA Dole_0327 373133 - 374032 + | exopolyphosphatase-related protein TERM 649 374135 - 374118 - T 100 -11.3 -6.38039 | opp_overlap 374118 TATGCAAAAAAAAAA GGGGCTT GTAA AAGCCCC TTTTTTAAATTCTTT TERM 650 374118 - 374135 + T 100 -11.3 -5.23016 | opp_overlap 374118 TATGCAAAAAAAAAA GGGGCTT GTAA AAGCCCC TTTTTTAAATTCTTT Dole_0328 376653 - 374161 - | Ig domain-containing protein Dole_0329 379655 - 376692 - | type IV pilus secretin PilQ TERM 651 377619 - 377637 + g 76 -4.4 -4.82667 | overlap 377610 377612 CTCGGTGACCAGGGA GGCCAGGG TCT CTTCGGCC TTTTTCATGTCCTGC TERM 652 378244 - 378263 + g 72 -5.7 -4.50976 | GGTTCAAACAGAATG CGGATGG TGTTAT CCATCTG TTTTATGGTGTAGGG TERM 653 378710 - 378727 + g 78 -8.3 -4.55295 | GTCCGGTCTTTCGGG CCGCGGC CAGG GCCGGGG TTTCTTTCTCCCCCA Dole_0330 380639 - 379659 - | hypothetical protein TERM 654 380316 - 380340 + g 100 -9.9 -5.00884 | overlap 380317 380318 CGGTGCCTGCTGCTC CTCGGCCGAAG GCC CTTCGGCCGCC TTTTTTGCCACCGGT TERM 655 380317 - 380339 + g 83 -13.4 -3.60048 | overlap 380316 380318 GGTGCCTGCTGCTCC TCGGCCGAAG GCC CTTCGGCCGC CTTTTTTGCCACCGG TERM 656 380318 - 380338 + g 87 -16.9 -2.75708 | overlap 380317 380316 GTGCCTGCTGCTCCT CGGCCGAAG GCC CTTCGGCCG CCTTTTTTGCCACCG TERM 657 380549 - 380565 + g 75 -10.1 -3.67597 | GCTCGGCTTGCTCCG GGGGGTT GTC AGCCCCC TTCTTGCATCCCACA Dole_0331 381271 - 380636 - | pilus assembly protein PilO Dole_0332 381825 - 381283 - | fimbrial assembly family protein Dole_0333 382877 - 381822 - | type IV pilus assembly protein PilM TERM 658 382085 - 382062 - G 79 -7.5 -4.64676 | overlap 382066 382070 GTAGGTGGAATAAAA GAAATCCAG GGCCCG CCGGATTTC GGTGGTCCAGTCGGA TERM 659 382081 - 382066 - G 74 -2.5 -4.87892 | overlap 382062 382070 GTGGAATAAAAGAAA TCCAG GGCCCG CCGGA TTTCGGTGGTCCAGT Dole_0334 383039 - 382887 - | XRE family transcriptional regulator Dole_0335 383454 - 384140 + | hypothetical protein Dole_0336 385310 - 384318 - | beta-lactamase domain-containing protein TERM 660 384423 - 384437 + g 88 -5.6 -5.24129 | overlap 384424 384424 384425 GAACGCGTAGAACAT TTCCGG CTC CCGGGG TTTTTTGTAGACAAA TERM 661 385477 - 385465 - H 71 -6.9 -4.29953 | overlap 385462 AAAGTACCAAAAGAA CCGCG CCC CGCAG CTTGGCCTTCGGCGT TERM 662 386866 - 386882 + G 72 -9.3 -3.75169 | GCGTGCCCGATCCCC GGGCCGG CAA CCCGCCC TTTACTGAGGTGCTC Dole_0337 385983 - 387716 + | AMP-dependent synthetase and ligase TERM 663 387822 - 387852 + T 76 -7.5 -4.41348 | gap 1, opp_overlap 387816 TCGAATCCACGGGTG GCACGAGCCAGAGC GGCA GC-CTTGCCCGTGC TTTGTTTCCGGGCAA TERM 664 388051 - 388086 + T 95 -12.4 -4.29953 | overlap 388071 CCACAATGATGCCCC CCGCCCGTTGCGGCGC AGCC GAGCCGCAGGGCGCGG TTCTTTTGGTACTTT TERM 665 388071 - 388089 + T 78 -8.1 -4.43571 | overlap 388051 CGTTGCGGCGCAGCC GAGCCGC AGGGC GCGGTTC TTTTGGTACTTTTCT Dole_0338 388780 - 388370 - | hypothetical protein TERM 666 388474 - 388488 + g 86 -3.5 -5.51165 | gap 1, overlap 388474 CTTCTATCTTTTTGT CCC-GC TCCT GCTGGG TTTTTTTAAACTTTT TERM 667 388690 - 388702 + g 76 -6.9 -4.45738 | GGCCCTCTACATCCT CTGCC GTC GGCGG TTTGTTGTTCAGGTA TERM 668 388737 - 388753 + g 90 -4.4 -5.36441 | gap 1, opp_overlap 388727 388726, overlap 388736 388752 AGAACGCGGATTGCC GC-CACC ACCA GGTGCGC TTTTTTATATAACGA TERM 669 388840 - 388863 + H 100 -12.5 -5.01732 | ACCCGGCTTCATTCA GGGCGTGAA CTGCTC TTCACGCCC TTTTTTCAGGCAATT TERM 670 388892 - 388909 + H 71 -6.3 -4.30844 | gap 1, opp_overlap 388883 TTATAAGCCGCTTCC GGC-CTTG ACA CAAGCGCC TTTTGATAGTAGCAT TERM 671 389681 - 389667 - g 84 -7 -4.7373 | overlap 389668 GGAGGCCATCAAAAA GGCCGG CTA CAGGCC CGGCAGGGATGTCGG TERM 672 390167 - 390147 - g 79 -12.5 -3.25823 | CGGCGGGCAGATCAA GACCGGGTC CCT GTCCCGGTC CGACCGGATCGCCAA Dole_0339 388984 - 390264 + | phosphopyruvate hydratase Dole_0340 390277 - 391122 + | hypothetical protein TERM 673 392786 - 392771 - g 74 -6.8 -4.36914 | overlap 392772 CCCTGGCTTATAAAA CCGGCA ACCC TGCCGA CAACCCGGATTGATG Dole_0341 391138 - 392799 + | CTP synthetase TERM 674 393397 - 393387 - g 71 -8.2 -4.08216 | CCATGGGCCTGAAAA CGGG GGA CCCG GTGGAGGTGATCACT Dole_0342 392810 - 393523 + | ferric uptake regulator family protein TERM 675 393747 - 393757 + G 71 -8.2 -4.07687 | GTGGTTCGCGTGGGA GGCC AGG GGCC TTTTCGCCGCCGCAT Dole_0343 393693 - 393929 + | FeoA family protein TERM 676 393928 - 393913 - f 75 -3.2 -5.03145 | overlap 393923 TAACCGTGGAAAAAA TACCGG ACAA CGGGTA GCCCGTGATGGAAAA TERM 677 394979 - 395010 + G 82 -10.8 -4.25104 | gap 1 GGACCTGATTATCGA CGG-CGCGCTGGCCG GCG TGGGCAGCGTGGCCG TTTTCCTGCCCAACA Dole_0344 393936 - 396110 + | ferrous iron transport protein B Dole_0345 396241 - 396867 + | metallophosphoesterase Dole_0346 396889 - 397338 + | hypothetical protein Dole_0347 398983 - 397460 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 678 398032 - 398085 + g 90 -10 -4.63218 | gap 1, opp_overlap 398029 ATAAAAAGGGAAGGG CCAGGCCGG-CCAGGCCGGCGGCCA GTAAG TGGCGGCGGCCCAGGTCCGGACCGG TTTTATTGACGGGCC TERM 679 398306 - 398276 - G 95 -6.7 -5.55855 | GCGAAAAAAAGAAAA CCGGGACACCAGG GCCAG CATGGCGCCCAGG GGACACAGGGTGCGG TERM 680 398813 - 398801 - G 74 -6.2 -4.41609 | CAGCAGAAAGATAAA GGCC CGACC GGCC AGCATCACCGAGGCC TERM 681 398983 - 398995 + r 95 -3.3 -5.94597 | GGCGGTTCTGGTTCA CGGGG TTG TCCTG TTTTTTTTCATCTTC Dole_0348 399977 - 399063 - | hypothetical protein TERM 682 399756 - 399773 + g 76 -3.3 -5.00616 | overlap 399760 399761 TCCGATGTTGGGCTT GATCACC ACCC GGTGGCC TTTTTTCACAAACCG Dole_0349 401977 - 400007 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 683 400668 - 400629 - G 71 -7 -4.19238 | gap 1, overlap 400630 GCCTCAACGGCAAAA CCGCCCCACCCCGTGCCGA TCT CCAGCACGTGGTCGGT-GG CCTGAATGCCGGCTT TERM 684 400668 - 400681 + g 70 -3.7 -4.58395 | AGCACGTGGTCGGTG GCCTG AATG CCGGC TTTTTCACAGATACG TERM 685 401567 - 401531 - G 71 -10 -3.53012 | gap 1, opp_overlap 401533, overlap 401534 CTTGGTGGTCCGAAA GGA-CGCCGCCCAGCCC TCAG GGGCGGGGAGGTGGTCC TTGAGCACATAGATA Dole_0350 403245 - 401974 - | amine oxidase TERM 686 402485 - 402468 - G 72 -4.7 -4.56597 | TCGCCGCGTCAAAAA CAGCCGG CGGT CCGTCCG TCGTGGTGACCATAA Dole_0351 403676 - 403266 - | hypothetical protein TERM 687 403431 - 403444 + g 72 -4.5 -4.56775 | opp_overlap 403415, overlap 403432 403439 CACGCCGAACAGGCA TCCTG AAAC CAGGG TTTTTGCCAGGGCCT TERM 688 403542 - 403572 + g 72 -9.7 -3.67564 | gap 1, opp_overlap 403524 403523 403526, overlap 403544 GGCCGCTCCCCAGTT G-ACCTGGGGGGCC ATCA GGTACCCCAGGTGC TTTCGATACATGCTT TERM 689 403544 - 403569 + g 74 -12.5 -2.9462 | opp_overlap 403524 403523 403526, overlap 403542 CCGCTCCCCAGTTGA CCTGGGGGGCC ATCA GGTACCCCAGG TGCTTTCGATACATG Dole_0352 404475 - 403690 - | hypothetical protein TERM 690 404067 - 404092 + g 77 -13.3 -3.01712 | gap 1 CCGTCCAGGTCAGTG CGGCCGGGGTGG CGG CCACC-TGGCCG TATTGAACCCCCAGG TERM 691 404156 - 404129 - G 70 -12 -2.78813 | overlap 404128 GTCCATTGGAACAAT GCCTGCACCAGG AACA CCTTGTACAGGC TCACCCACCAGAAGC Dole_0353 405888 - 404494 - | major facilitator transporter TERM 692 404967 - 404950 - G 70 -2.6 -4.72272 | overlap 404952 404964 CGGCCCCAGGAAAAA GACACC GAAAAA GGCGCC GGTGTTGACCGCCAT TERM 693 405250 - 405229 - G 85 -2.8 -5.41143 | overlap 405230 CATGCCGGAAAAAAA GGGGGCCG CGGTTT CGGGCCGC ACTGTCGTTCGTTCC Dole_0354 406475 - 405885 - | hypothetical protein TERM 694 406017 - 405963 - G 85 -2.1 -5.50499 | opp_overlap 405973 405974, overlap 405975 CCAGATGGAAAAAAA CGCACGTGAAAAGGC-GGCGCCGGGAA CCG TTCCCAGTGCCTGCCCGTTTA-ATGCC AGTTCTGTTCCGGAT TERM 695 406006 - 405975 - G 93 -13 -4.15854 | gap 1, opp_overlap 405974 405973, overlap 405963 AAACGCACGTGAAAA GGC-GGCGCCGGGAA CCG TTCCCAGTGCCTGCC CGTTTAATGCCAGTT TERM 696 406335 - 406358 + g 75 -5.2 -4.59773 | overlap 406318 GCCCCGCAGGGTCAG GCGCTTTTCG CTGA CGTAAACCGC TTTTTCAAAGTCAGC Dole_0355 406920 - 407231 + | hypothetical protein TERM 697 407281 - 407262 - f 100 -13.6 -4.58395 | opp_overlap 407262 TTGATTTTGTAAAAA GAGCGGTG CCGG CACCGCTC TTTTTTTTATGCACA TERM 698 407262 - 407281 + F 100 -13.6 -5.93809 | opp_overlap 407262 TTGATTTTGTAAAAA GAGCGGTG CCGG CACCGCTC TTTTTTTTATGCACA Dole_0356 407493 - 408407 + | ArsR family transcriptional regulator TERM 699 408457 - 408481 + F 70 -10 -3.15579 | overlap 408460 TGCCCCCCTCGTCAC TGCGGCGTAC AACAA GTACGCCTCA TTCCTCGGGACTTGC TERM 700 408460 - 408478 + F 71 -10.3 -2.78018 | overlap 408457 CCCCCTCGTCACTGC GGCGTAC AACAA GTACGCC TCATTCCTCGGGACT TERM 701 408965 - 408943 - g 77 -2.7 -5.09895 | GATGGAGGTAAAAAA GCGGTTC AAGAAGGAA AAACCGC TCAAGGGCGTGCGCA Dole_0357 408827 - 410095 + | adenosylhomocysteinase TERM 702 410119 - 410153 + F 100 -27.3 -5.63236 | opp_overlap 410111 GACTTAACTTTACCC TCCCACACCCCCGGC GTTAA GCCGGGGGTGTGGGA TTTTTGTTTTTACCT TERM 703 410791 - 410801 + G 80 -2.4 -5.26316 | opp_overlap 410791 CCGGTTCTTAAACAA CCGG ACC CCTG TTTTTTATGCCCTGG TERM 704 411501 - 411534 + G 86 -8.9 -4.56597 | gap 1, opp_overlap 411507 411509 TCCTTCTGCCCTACT CGGAA-AGAGGACCGG CTG TCGGCCCTTTATTCCG TTTTTACAACGCCCC Dole_0358 410474 - 411991 + | apolipoprotein N-acyltransferase Dole_0359 413062 - 411968 - | hypothetical protein TERM 705 412400 - 412420 + g 83 -4.6 -5.07486 | CCACATCTCCTGTGT CAGCCGGT CCATC GCCGCCTG TTTTTCTTCGGCATA TERM 706 413073 - 413121 + r 72 -5.7 -4.37658 | opp_overlap 413084, overlap 413084 413086 413119 CCCATTCTCTTTTTT CCTCAAAAAAACAGGGGCCGCCC GGC GGGCGACCCCTGTCTGTCATCGG TTTTATGAAACCGTT TERM 707 413110 - 413084 - R 100 -21.6 -5.40072 | opp_overlap 413073 413084 413086 TTTTCCTCAAAAAAA CAGGGGCCGCCC GGC GGGCGACCCCTG TCTGTCATCGGTTTT TERM 708 413084 - 413110 + r 100 -19.4 -2.97386 | opp_overlap 413084, overlap 413073 413086 TTTTCCTCAAAAAAA CAGGGGCCGCCC GGC GGGCGACCCCTG TCTGTCATCGGTTTT TERM 709 413086 - 413108 + r 100 -16.2 -3.03214 | opp_overlap 413084, overlap 413084 413073 TTCCTCAAAAAAACA GGGGCCGCCC GGC GGGCGACCCC TGTCTGTCATCGGTT TERM 710 413119 - 413134 + r 75 -7.6 -4.25104 | overlap 413073 ACCCCTGTCTGTCAT CGGTTT TATG AAACCG TTTTAATAGCCGCGC Dole_0360 414036 - 413137 - | alpha/beta fold family hydrolase TERM 711 414184 - 414199 + H 100 -4.7 -6.22691 | TATAGCGGTTTATGG TTGCC ATATAA GGCAA TTTTTTTTATTATTG TERM 712 414582 - 414570 - g 70 -4.7 -4.45083 | overlap 414572 GTTATATTTACAAAA GAGGC AAG GCCGC CAACTGGTCCTCCGT TERM 713 414817 - 414793 - g 71 -7.2 -4.1899 | gap 1, overlap 414805 GGAGCCGATGGAAAA CACC-GACGAA ATCT TCCGTCAGGTG ACCCGTCGGCTGTGC TERM 714 415337 - 415321 - g 100 -3.7 -5.95946 | overlap 415313 GGAAGAAGAAAAAAA GTTTCTT CAA AAGGAAC TGCATCATCCCGTGA TERM 715 415603 - 415586 - g 75 -4 -4.72272 | overlap 415588 TTCGGCCATGAAAAA GGGGCC TTTACC GGCGCC GTGGGCCGGAAGACC TERM 716 415606 - 415623 + G 71 -8.3 -4.07568 | opp_overlap 415588, overlap 415607 CTTTACCGGCGCCGT GGGCCGG AAGA CCGGCCG TTTTGAACGGGCCCA TERM 717 415607 - 415622 + G 73 -11.8 -3.04398 | opp_overlap 415588, overlap 415606 TTTACCGGCGCCGTG GGCCGG AAGA CCGGCC GTTTTGAACGGGCCC Dole_0361 414248 - 416293 + | Fis family transcriptional regulator TERM 718 416589 - 416606 + G 73 -12.7 -2.72049 | opp_overlap 416600 416601 TCAGCGACTACCTGG GCAGGCG AAAA CGCCTGC TGGTTGCCGGCTATG TERM 719 416972 - 417007 + G 73 -11 -3.38272 | gap 1 ATCGCCAGCCCGGTA TCGCCCCTGGCCGGGGC CCA GCGGCTGCC-GGGGCGA TTCTGGATGGTGGTG Dole_0362 416327 - 417550 + | major facilitator transporter Dole_0363 420425 - 417621 - | parallel beta-helix repeat-containing protein Dole_0364 421813 - 420485 - | hypothetical protein TERM 720 421270 - 421280 + g 72 -4.6 -4.56597 | CCTTTACTGCGTCCG GGCT GTG GGCC TTTTTGCGGGAGGGA TERM 721 422089 - 422065 - H 70 -10 -3.17714 | opp_overlap 422046, overlap 422068 GCAAATCCCGAGGAA TGAGGCGTAC TTGTC GTACGCCGCA GTGACGAGGGGGGCA TERM 722 422086 - 422068 - H 71 -10.3 -2.78395 | opp_overlap 422046, overlap 422065 AATCCCGAGGAATGA GGCGTAC TTGTC GTACGCC GCAGTGACGAGGGGG TERM 723 422751 - 422730 - g 81 -4.3 -5.03314 | overlap 422731 422732 TTCACGCGCAAAAAA CCGGCGAAG TGCT CTCCGCCAT TGACCCTGAGTATGT Dole_0365 422177 - 423046 + | radical SAM domain-containing protein Dole_0366 423151 - 423582 + | S23 ribosomal protein TERM 724 423669 - 423652 - f 73 -3.5 -4.98436 | gap 1 TTAACAGGAGAAAAA TTTCATGG CCA CCA-GAAA AACCGCGGGCAACAA TERM 725 423988 - 423972 - g 74 -7.2 -4.25848 | AACTGGGCAGCAAAA CCCCGG GCCAT CCGGAG TACGGCCACACCCCC TERM 726 424520 - 424506 - g 82 -6.4 -4.82901 | overlap 424510 424511 TTGTTCTGACAAAAA GAAACC TGG GGTTCC CCGAAGACGTGGTCT TERM 727 424526 - 424510 - g 78 -4.3 -4.96501 | overlap 424506 424511 TCTGACAAAAAGAAA CCTGGGG TTC CCCGAAG ACGTGGTCTGCCACA Dole_0367 423656 - 425671 + | transketolase TERM 728 425672 - 425684 + F 100 -10.5 -4.57837 | opp_overlap 425671 425669 425672 GTACTCGGAAAATAG CCGGC AAG GCCGG TTTTTCGACGACTAT TERM 729 425684 - 425672 - f 71 -10.5 -2.79004 | opp_overlap 425672, overlap 425671 425669 GTACTCGGAAAATAG CCGGC AAG GCCGG TTTTTCGACGACTAT TERM 730 425764 - 425734 - g 86 -11.8 -4.08945 | opp_overlap 425732 ATCACGTTTCCAAAA GGCCCGCCTGCC GATGCGG GGCAGGGGGACC AGTGCTTCTGCGTGA TERM 731 426116 - 426143 + G 78 -8.5 -4.21908 | gap 1, overlap 426107 ACGTGACCGACTTTT GCCGGTTGTCTC AAGAG GAGACAGC-GGC TTTTCAATCCTGGTC Dole_0368 425698 - 426462 + | methyltransferase type 11 TERM 732 426546 - 426560 + T 73 -3.5 -4.99643 | TCAGCGTCGGATATG TCGGT CTTAC GCCGA TTCTTTTTTTTGGTC Dole_0369 427478 - 426552 - | DNA binding domain-containing protein TERM 733 426936 - 426951 + g 75 -5.4 -4.56597 | GGTACCATGGGCCCG GTTGAC GATA GTCAGC TTTTTGCGGGCCAGA TERM 734 427581 - 427601 + H 85 -6.1 -5.14563 | GCACCGGCCTGTCAA CCTCGGT CATTTGC GCCGAGG TTTTTTCATGGACAA Dole_0370 427693 - 428667 + | phosphoesterase domain-containing protein Dole_0371 429621 - 428881 - | hypothetical protein TERM 735 429141 - 429188 + g 78 -3.2 -5.03314 | gap 1, overlap 429142 CCCGCACATCCTCGG CCCCGGCCTCG-ATGGCCACTTC CAT GAGGTGGTCCTCCTCGGCCGCGC TTTTTTCCACCTCGA Dole_0372 430231 - 429608 - | ribosomal RNA methyltransferase RrmJ/FtsJ TERM 736 430359 - 430335 - R 70 -10 -3.17714 | overlap 430338 GCAAATCCCGAGGAA TGAGGCGTAC CGGGT GTACGCCGCA GTGACGAGGGATGCA TERM 737 430356 - 430338 - R 71 -10.3 -2.78395 | overlap 430335 AATCCCGAGGAATGA GGCGTAC CGGGT GTACGCC GCAGTGACGAGGGAT Dole_0373 431771 - 430413 - | DNA repair protein RadA TERM 738 430739 - 430752 + g 87 -3.8 -5.47218 | CGTCATACCCGGTCA GCTC CATGCC GAGC TTTTTTTCCATCACC TERM 739 430899 - 430912 + g 78 -3.1 -5.03747 | gap 1 CATGCTGGCCGTTAC CA-CGG ACC CCGGTG TTTTTTCAGGCATTT TERM 740 432658 - 432642 - gH 73 -7.9 -3.97511 | CACCGAAGAGAAGAA CCGGGTG AGC CACCGGG GCAAAGCCCTTCAGG Dole_0374 432109 - 432783 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 741 432845 - 432802 - gf 70 -3.8 -4.56597 | gap 1, overlap 432804 432807 432829 432830 CCTGGTCCGTAAAAA CAGGACCTGCCGGC-GGTTTT ACG AAAACCAGCCGGTAGATAGAG ATACCCTCTGCCAGC TERM 742 432840 - 432807 - gf 74 -11.1 -3.01831 | gap 1, overlap 432804 432802 432829 432830 TCCGTAAAAACAGGA CCTGCCGGC-GGTTTT ACG AAAACCAGCCGGTAGA TAGAGATACCCTCTG TERM 743 432956 - 432937 - gf 93 -5.8 -5.40072 | overlap 432944 CTCCTGGGAAAAAAA GAAAAACC AGGT GATTTTTC CCTGCCTGGCCTGGG Dole_0375 432755 - 433345 + | nitroreductase TERM 744 433688 - 433673 - g 95 -2.4 -5.80364 | AGGCGAAGAAAAAAA GCTGCC CATG GACGGC CACACCATTCACTAC TERM 745 433998 - 434012 + G 79 -7 -4.57341 | overlap 434000 TTTGACAGGGAGGTG GCGGCC GGA GGCCAC TTTTTCACCAACATT TERM 746 434060 - 434045 - g 70 -2.4 -4.75174 | overlap 434047 CAGCGAAGGCAAAAA CCGGCC CGAG GACCTG CCCAACGCCCGGGTG Dole_0376 433422 - 435371 + | phosphoenolpyruvate carboxykinase TERM 747 435386 - 435417 + F 100 -20.2 -5.27335 | GCCTTTTATTCCCAG GGCCGCCCGTCAAA AAAA TATGACGGGCGGCC TTTTTGTTTGACCGG Dole_0377 435563 - 437083 + | major facilitator transporter TERM 748 437292 - 437265 - g 83 -5.4 -4.90869 | opp_overlap 437283, overlap 437266 ATCATCAAGGAAAAA CTGGCCGCCGTG GCCG CGCAGCGGCAAA AGGCCCTGTCCCTTC TERM 749 437367 - 437383 + G 86 -3 -5.56263 | gap 1, overlap 437348 CCGGCCATTGTCCAC TCCATGG CCGA CCA-GGA TTTTTATTTTCTGGT TERM 750 437648 - 437672 + G 72 -4.9 -4.70879 | CCGGGAGCACGACCA GGAGCCGTCAG AGT TTGACGAGTCC TTTTTCACCTTTGAC TERM 751 437997 - 437982 - g 100 -11.8 -5.03747 | overlap 437984 AAACCCGTGAAAAAA CCGGCC CGCC GGCCGG CAAAGAGAAGCCGGC TERM 752 438020 - 438039 + G 78 -9.2 -4.07568 | opp_overlap 437984 AAGCCGGCTGCCGGT GCCCGTGG TCCA CCACCGGC TTTTGAAAAAAACCA TERM 753 438593 - 438575 - g 70 -3.9 -4.56597 | gap 1, opp_overlap 438591 CGGGCTTCTGAAAAA GGCAG-AT GTTG ATCCTGCC CCGGTGTCCGGCACT Dole_0378 437232 - 438944 + | hypothetical protein TERM 754 438989 - 439039 + T 71 -4.5 -4.49337 | gap 1, opp_overlap 439017 439018, overlap 438977 438992 ATCTCTGCGTCAAAC CGCGGGCTTCCTTGTGCGGCGTAC AACA GTACGCCTC-CGCGTCAGCCCTTG TTTTCCTTGATCTTG TERM 755 438992 - 439036 + T 76 -7 -4.34008 | gap 1, opp_overlap 439017 439018, overlap 438977 438989 TCTGCGTCAAACCGC GGGCTTCCTTGTGCGGCGTAC AACA GTACGCCTC-CGCGTCAGCCC TTGTTTTCCTTGATC TERM 756 439176 - 439151 - T 79 -9.7 -3.95836 | gap 1 AGTCCGAAAACATAA CGCGGGC-AAGC TTC GCTTAGCCCGTG GCACCCATCAACGAC TERM 757 439319 - 439308 - T 73 -3.6 -5.00616 | CCCGCGCCGAAAAAA CCGC TTGC GCGA GGGCAGCCGAAGGCC Dole_0379 440295 - 439399 - | quinolinate synthetase complex, A subunit TERM 758 439563 - 439578 + g 75 -5.4 -4.57073 | AGGCCCAGTAGAACC GCTTGT CCGG ACAGGC TTTTTGAAGCGGATA TERM 759 439865 - 439881 + g 70 -2.2 -4.7254 | GCCAGGTTCCGGTCC GGGGTC ATGAG GATCTC TTTTTCCTCCAGGCT Dole_0380 440981 - 440292 - | outer membrane lipoprotein carrier protein LolA TERM 760 440370 - 440357 - G 77 -2.3 -5.0916 | opp_overlap 440369, overlap 440359 TGTCGAAGACAAAAA GGGTG TCGG CAGCC GGCAGGTCAAACCGC TERM 761 440612 - 440602 - G 74 -2.4 -5.00884 | overlap 440604 ATGTCCGTGAAAAAA CTGG CGC CCCG GCCGTCGCCGAAAAG Dole_0381 441315 - 441731 + | hypothetical protein TERM 762 441782 - 441771 - g 75 -3.6 -4.7254 | ATCGTTGATGAAAAA GGCG ACAA CACC CTCGTCATGGAGGCG Dole_0382 441735 - 441929 + | hypothetical protein TERM 763 442820 - 442870 + G 83 -5.2 -5.00616 | gap 1, opp_overlap 442851 442852, overlap 442851 442854 TCAAGAAAATCTATC GCGAGCTGG-AGGCGGCCCGGTT TCGCTC AAAGGGGCCGCTGGCCCGCACGC TTTTTTCCGCCCAGC TERM 764 442944 - 442970 + G 78 -8.7 -4.25283 | gap 1 CCTGCTCTGCTACAG TGC-CTCCCTGC TGCG GCAGGGCGAGCA TTTTGCTCCCCACAT TERM 765 443112 - 443094 - g 74 -2.3 -4.91109 | overlap 443097 CTTTTACGACAAAAA CATGACC GTTCT GGCCCTG CTGGCCGTGGGGGCG TERM 766 443384 - 443415 + G 86 -5.8 -5.06451 | gap 1 TGTTTACGGCCCTGT GGCTGGCCGG-CA TCGTGTT TGTCCGGTCCGCC TTTTTTGACCTGATC Dole_0383 442006 - 443739 + | hydroxymethylbutenyl pyrophosphate reductase Dole_0384 444691 - 444062 - | hypothetical protein TERM 767 444407 - 444382 - G 90 -7.5 -5.07107 | TAAACCCTGAAAAAA CGGGATAGCAG TGGC CTGCCACCGCG GCCAGGCCGGCAAGG TERM 768 444613 - 444601 - G 90 -4.9 -5.4505 | CTTTTGAAGAAAAAA GTTTT GTC AAAAC CAGGCCCACCGGAAC Dole_0385 444930 - 445187 + | Smr protein/MutS2 TERM 769 445221 - 445210 - g 70 -2.2 -4.77036 | overlap 445216 CGGCAGGAGGAAAAA TGGA AACG CCCA TTATTTCGGCGGTCA TERM 770 445352 - 445362 + G 72 -4.6 -4.62069 | opp_overlap 445334, overlap 445334 CCTGGACCTGGGCCA CGGC GGT GCTG TTTTTACCCTGGCCG Dole_0386 445209 - 445601 + | thioesterase superfamily protein Dole_0387 446073 - 445891 - | hypothetical protein TERM 771 446372 - 446346 - H 73 -7.9 -3.9902 | opp_overlap 446351 TATATGAATAAAATA CCCGACAGGCG CGGGC CGCCTGTTTGG GGCGCCATACAGGGC TERM 772 446351 - 446367 + H 71 -9.4 -3.53444 | opp_overlap 446346 GAATAAAATACCCGA CAGGCG CGGGC CGCCTG TTTGGGGCGCCATAC TERM 773 446627 - 446639 + G 72 -4.9 -4.68384 | overlap 446631 TCGACTCCCTGAATG TCTTT AAA AAAGA TTTTATTGAATACCT TERM 774 446854 - 446821 - g 86 -6 -4.90869 | gap 1, overlap 446822 AGCATCAACGAAAAA GGGTTTCACAGCGTG GAAGA CACGCTG-GACACCG GGGAACAGCGCCTGG Dole_0388 446410 - 447612 + | nicotinate phosphoribosyltransferase TERM 775 447779 - 447791 + G 82 -10.5 -4.12901 | GGGTGTACGGCCCCG CCGGC TCC GCCGG TTTATGTCGATTTTG TERM 776 447911 - 447928 + G 74 -2.6 -5.00884 | overlap 447913 GATGTGGCCTTTGAG CAGGCC GGCACA GCCCTG TTTTTTCACCACAGT TERM 777 447994 - 447978 - g 78 -6.5 -4.58663 | ACCAGTTTTTAAAAA CCGCTTC CCT GAACCGG GCCCGGGAATACCTG Dole_0389 447704 - 448603 + | membrane-bound lytic murein transglycosylase B-like protein Dole_0390 448625 - 448843 + | hypothetical protein TERM 778 449205 - 449169 - g 100 -9.4 -6.09196 | gap 1, opp_overlap 449169, overlap 449192 TGTAAAAGAAAAAAA GCTGGCCGGCCTGCTTT CCGA AATGCAGGCC-ACCGGC AGCCGGATCGACTTT Dole_0391 448840 - 449562 + | biotin--acetyl-CoA-carboxylase ligase TERM 779 449619 - 449601 - f 74 -6.6 -4.43571 | overlap 449604 AGAAAAGTACCAAAA GAACCGCG CCC CGCGGCTT GGCCTTCGGCTTCCC TERM 780 449616 - 449604 - f 85 -10.5 -4.29953 | overlap 449601 AAAGTACCAAAAGAA CCGCG CCC CGCGG CTTGGCCTTCGGCTT TERM 781 450351 - 450337 - f 75 -7.8 -4.19238 | opp_overlap 450324 450337 TTTGGAAGCGCAAAA TCAGGG TTT CCCCGA TTGTGCCGCGACCAT TERM 782 451177 - 451194 + G 80 -9.9 -4.11216 | opp_overlap 451190 451191, overlap 451170 CCCCGTTACCAGGCC CCGGATT TTCA AATCCGG TTTTCCGGCTCCCCG TERM 783 452219 - 452194 - g 73 -11.9 -3.14132 | overlap 452214 CTGGTGGCCCAGGAA CTGCTGCTGTT TGAA AACAGCGGCAG CGACGAACTGGAGCC Dole_0392 450466 - 452979 + | exporter of the RND superfamily protein-like protein Dole_0393 453039 - 453884 + | hypothetical protein TERM 784 454208 - 454193 - g 76 -4.6 -4.84359 | opp_overlap 454195, overlap 454195 454196 TGAGCGGCAGAAAAA GACCGG GGAG CCGGTT CTCAGCACCAGCCCC TERM 785 455057 - 455021 - g 79 -7.2 -4.62069 | gap 1, opp_overlap 455029, overlap 455023 GTGGGAGCTGAAAAA GGGGCAGGTCGTCCAGC CGGT GCTG-ACCACCGGCGCC GGCCTGCTGCGATAC TERM 786 455113 - 455123 + G 70 -2.4 -4.72007 | opp_overlap 455113 CCGGTTTTCTGCAAA GCTG CCC CTGC TTTCTTTTCCTGGGC TERM 787 455399 - 455379 - g 71 -12.5 -2.66395 | overlap 455378 ATTTATCACTACAAC CTGGCCCGG GAC CTGGGCCAG CTGGCCCATCTGAAA Dole_0394 453936 - 455579 + | GH3 auxin-responsive promoter TERM 788 455798 - 455786 - g 74 -6.9 -4.35682 | overlap 455783 CCACAATGAAAATAA GCGAC TTT GCCGC ACAATTCGGGTGTGT TERM 789 456026 - 456051 + G 93 -12.5 -4.18488 | overlap 456043 GGCCCTGCTATATTG GTGGCCGGCCC GACA GGGTAGGCCAC TTTCTTGACCTGCGT TERM 790 456266 - 456255 - g 74 -2.2 -4.96848 | overlap 456265 GGCCGGACAGAAAAA GGCT GAAA AACC GGCACCGGCACCGGA TERM 791 456280 - 456265 - g 72 -4.6 -4.67168 | overlap 456255 AAAAAGGCTGAAAAA CCGGCA CCGG CACCGG AACGCAAGGCCCCCC TERM 792 456334 - 456314 - g 90 -8.1 -5.00616 | overlap 456316 TTCCGCCTGAAAAAA CCCCCGCGG CGC CCGCGCCGG CACCAGAGGCGTTCA TERM 793 456640 - 456654 + G 81 -12.8 -3.53012 | opp_overlap 456636 TCCGGGAAAATTCTT GGCGCC TTT GGCGCC TTTGACCCCGGCAGG Dole_0395 455692 - 457065 + | hypothetical protein TERM 794 457219 - 457206 - f 75 -5.9 -4.57341 | overlap 457207 AAGGCTCGGCAAAAA CGCCG GACC CGGCA TCCACCTTGAACATA TERM 795 457532 - 457520 - g 74 -2.6 -4.87665 | overlap 457523 457528 CCTGATCGACAAAAA CCAG CAGAC CCGG GAACGGACCATGCGC Dole_0396 457317 - 458156 + | hypothetical protein TERM 796 458878 - 458868 - g 79 -6.8 -4.67635 | opp_overlap 458876, overlap 458869 CGGAAAACCACAAAA GCCA AGC TGGC CATCATCGGCGGTCT Dole_0397 458313 - 458954 + | hypothetical protein TERM 797 459090 - 459072 - T 83 -6.7 -4.89339 | gap 1, overlap 459073 459074 459076 AACCAGCTAGAAAAA GCCACCGC CATG GCGGTG-C ACATGGTCTCCGACG Dole_0398 459893 - 459063 - | aldo/keto reductase family oxidoreductase TERM 798 459249 - 459277 + g 89 -6.6 -5.12707 | overlap 459250 CCGGTAGCAGTCACT GGCCCGAAGCGG CGGCT CTCCTTCGGGCA TTTTTTCAGATTTGA TERM 799 459250 - 459276 + g 75 -10.1 -3.6654 | overlap 459249 CGGTAGCAGTCACTG GCCCGAAGCGG CGGCT CTCCTTCGGGC ATTTTTTCAGATTTG TERM 800 459376 - 459357 - G 70 -3.6 -4.56775 | opp_overlap 459375 ATCGCCCTTCAAAAA CGGAAA GGTCTCTG TTTCCG CACCCCGGTGGGCCG TERM 801 459464 - 459492 + g 89 -6.7 -5.07652 | gap 1 GCCCGCGGGAATGGC CGGAC-ATGCCG ATAAAC CGGCACAGTCCG TTTTGTTTTAGCCGC TERM 802 459820 - 459777 - G 74 -11.6 -3.5394 | gap 1, overlap 459765 459766 AAACGCCTCCTCAAA GGCGGCCGGCGGCGCGCCG TAACTGG CGGCAAGGC-CCAGCCGCC CGACGGAAAGCCCGG TERM 803 460138 - 460124 - g 71 -7 -4.25104 | opp_overlap 460131 TTGCCTGCATGAAAA GCAGGG GCC CCCGGC ATACACATCGTCGCT Dole_0399 460029 - 461102 + | FAD dependent oxidoreductase Dole_0400 461188 - 462096 + | periplasmic solute binding protein TERM 804 462515 - 462528 + G 75 -3.7 -4.82901 | overlap 462508 AGAGCTTTCCGGGGG CCAGC GCCA GCGGG TTTTTATCGCCCGGG Dole_0401 462093 - 462866 + | ABC transporter-related protein TERM 805 462994 - 463032 + G 83 -5 -5.08601 | GTGTTTCTCTCCGGC GGCATTGCCCACGCGGCC TTC GGCGGTATCGGCATGGCC TTTTTCTTCGGCTGG TERM 806 463601 - 463635 + G 80 -9.3 -4.2338 | gap 2, overlap 463596 463602 CCTTTGACCTGACCT CG-GGCG-CGGCCATCA TCC TGGTGGCCGGCGCCGCC TTCTTTCTCTTCCTG TERM 807 463602 - 463634 + G 76 -12.8 -3.12943 | gap 2, overlap 463601 463596 CTTTGACCTGACCTC G-GGCG-CGGCCATCA TCC TGGTGGCCGGCGCCGC CTTCTTTCTCTTCCT Dole_0402 462871 - 463692 + | ABC-3 protein TERM 808 464076 - 464062 - T 80 -8.6 -4.45115 | overlap 464059 AGTAACAGAAAACAA GGTTTC TAC GAAACC GTCAAAGCGTATCCA Dole_0403 464404 - 464078 - | hypothetical protein Dole_0404 465897 - 464425 - | methyltransferase GidB TERM 809 464700 - 464680 - G 71 -12.5 -2.60496 | overlap 464679 464677 464665 CGGGCCTTCAAACAG GGGGGCGTG CAG CACGGCCCC GGCTGAGGCCCGAAT TERM 810 465048 - 465091 + g 100 -8.8 -5.55855 | gap 1, opp_overlap 465044, overlap 465027 GATCGGGAAAGGCGG CCAGGGCCTCGGTTACCGG CTTTACC CCGGCAACC-AGGGCCAGG TTTTGTTTTTTTACG TERM 811 465815 - 465857 + g 71 -7.6 -3.96148 | gap 1, opp_overlap 465804 465807 465828, overlap 465817 GAAAGCACGATGCCC GACCGCGCAAGCAGGCGGG CCATCT CCCGC-TGCGTGTGCCGGC TTTCTCCTGCGGAGG Dole_0405 465921 - 466697 + | pseudouridine synthase TERM 812 467329 - 467362 + GT 100 -10.3 -5.81412 | gap 1 CAAGCACACATGGCC GTTTGCCGACCCGGAA ACG TTCCG-GCCGGCCAAC TTTTTTTTCAATCAA Dole_0407 469235 - 467448 - | radical SAM domain-containing protein Dole_0406 466691 - 467569 + | hypothetical protein TERM 813 468133 - 468151 + gF 90 -4.5 -5.40072 | opp_overlap 468126, overlap 468130 CAGAGACACTGGCGG CCGGC ACACACCCC GCCGG TTTTTTTGCGGCCGC TERM 814 468517 - 468548 + gF 73 -8.6 -3.87815 | overlap 468511 468514 GTGTCCTGAAGCTGG CACAGCCGTTTGCC CCGG GGCGTGCGGCTCTG TTTGTAAAACTCGGC TERM 815 469033 - 469048 + gF 71 -10.4 -2.85351 | opp_overlap 469025 469023 469026 CAGAACAGGGCCGGC TCGCCC AGCC GGGCGA TATCGTCTCCAGAGA TERM 816 469539 - 469555 + FH 91 -4.4 -5.61596 | GCCATTTCTAAAACT TTTGGC CATCA GCCGAA TTTTTTTGTGAAAAT TERM 817 469680 - 469666 - g 89 -4.2 -5.64304 | overlap 469668 GAAGACAAGAAAAAA GAGAAG GTA CTTCAC GCGCGCATCAGCCAG TERM 818 469678 - 469668 - g 72 -5.4 -4.42868 | overlap 469666 AGACAAGAAAAAAGA GAAG GTA CTTC ACGCGCGCATCAGCC Dole_0408 469645 - 470103 + | hypothetical protein TERM 819 471120 - 471132 + G 93 -5.5 -5.52384 | overlap 471121 GTTTTTGCAGCCAGA TCGTG ACC CACGG TTTTTTTCATGCCGA Dole_0409 470225 - 471601 + | hypothetical protein Dole_0410 471818 - 472009 + | hypothetical protein Dole_0411 472016 - 472393 + | PilT domain-containing protein TERM 820 472541 - 472557 + F 91 -6.5 -5.252 | ACCAGACACCATTTA CCGGC ACCTGTC GCCGG TTTTTTATCAACGTA TERM 821 474095 - 474073 - g 80 -4.7 -5.00616 | opp_overlap 474090, overlap 474075 474076 GCCCTGCTGAAAAAA GACCCGGCC GTGGT GGCCAGCCC GGCGTTGACCACCAT TERM 822 474090 - 474129 + G 76 -12 -3.42257 | opp_overlap 474076 474073 474075 CCCGGCCGTGGTGGC CAGCCCGGCGTTGACCAC CATG GTGGACATCACCGGCCTG TTGATCTATTTCACC Dole_0412 472786 - 474171 + | magnesium transporter TERM 823 474228 - 474252 + F 70 -10 -3.17714 | overlap 474231 TGCACCCCTCGTCAC TGCGGCGTAC GACAA GTACGCCTCA TTCCTCGGGATTTGC TERM 824 474231 - 474249 + F 71 -10.3 -2.78395 | overlap 474228 ACCCCTCGTCACTGC GGCGTAC GACAA GTACGCC TCATTCCTCGGGATT TERM 825 474519 - 474480 - f 77 -8.4 -4.22338 | gap 1, opp_overlap 474478 474485, overlap 474484 ACCATAATTTGAAAA GACAGTGCCGGGCGGGCGT TTA ATGCC-GCCCGGCCCACTC CATCATGTTCAATCA TERM 826 474515 - 474484 - f 85 -12.2 -3.42437 | gap 1, opp_overlap 474478 474485, overlap 474480 TAATTTGAAAAGACA GTGCCGGGCGGGCGT TTA ATGCC-GCCCGGCCC ACTCCATCATGTTCA TERM 827 474678 - 474690 + G 88 -5.5 -5.24531 | overlap 474627 474679 CCAGCCTGGCCGTGA TCCTG TTC CAGGG TTTTTTATACGGCAT TERM 828 474828 - 474850 + G 80 -10.4 -3.99324 | overlap 474830 TGGCGGCACTGATCG CTGCCTGGCC CCT GGCCCGGCTG TTTCTGCTGATGGGC TERM 829 474830 - 474848 + G 74 -11.6 -3.58864 | overlap 474828 GCGGCACTGATCGCT GCCTGGCC CCT GGCCCGGC TGTTTCTGCTGATGG TERM 830 474907 - 474924 + G 78 -3.4 -5.03314 | GATGACCTATTTCTG GATCTG CATGGC CGGATC TTTTTTCCCGGTGGC TERM 831 475155 - 475186 + G 81 -12.2 -3.64703 | gap 1 TCCTGTTTGCAAGGG CCGGCGGGTT-CGGC GAG GCAGCGGCCCGCCGG TTTGAATGGCCCGCC Dole_0413 474524 - 475873 + | MATE efflux family protein TERM 832 476085 - 476099 + F 100 -4.2 -6.06723 | overlap 476087 GTTCCGGGAAAACCC CCGTCT GCC AGACTG TTTTTTTTTGCACAA TERM 833 476087 - 476097 + F 75 -5.4 -4.69028 | overlap 476085 TCCGGGAAAACCCCC GTCT GCC AGAC TGTTTTTTTTTGCAC TERM 834 476210 - 476191 - g 73 -3 -4.86862 | gap 1 TTTAAAAAATGAAAA CTGA-AAAT AAA ATTTCTCAG CGGCAGATCAACCGG TERM 835 477358 - 477333 - g 72 -4.5 -4.56775 | opp_overlap 477334 477350 ACCTTTTCGGAAAAA GAGCCCCTGGC CTTT ACCGGGGTCCC CAATTTCGCGCCCGA Dole_0414 476184 - 477779 + | peptide chain release factor 3 TERM 836 477867 - 477885 + T 77 -8.8 -4.25104 | overlap 477868 477869 GCAGTCAGTCCGCTT TGTCAGGC AAC GCCTGACC TTTTGGTGACAAAGG TERM 837 477868 - 477884 + T 82 -12.3 -3.14848 | overlap 477867 477869 CAGTCAGTCCGCTTT GTCAGGC AAC GCCTGAC CTTTTGGTGACAAAG TERM 838 477919 - 477906 - T 78 -8.1 -4.39571 | opp_overlap 477869 477915, overlap 477908 GTGACAAAGGCAAAA GGCAG GTCC CTGCC TGGTCAATTCGTACC Dole_0415 479095 - 477923 - | filamentation induced by cAMP protein Fic TERM 839 478066 - 478080 + g 78 -4.2 -5.0133 | CCTTGTTAACCGTGG CCGG GGTGAGA CCGG TTTTTTCCACCAGTG TERM 840 478596 - 478580 - G 80 -9.3 -4.16842 | CGGAGGCGGAACAAA GGCCGCG TTG CCCGGCC GGGTGCCGCCGATCC TERM 841 479193 - 479173 - R 73 -2.5 -5.1634 | opp_overlap 479173, overlap 479175 ATAAACAGACAAAAA CAGAAAAGC AAC GTTTTTCGG ATTTTTCTTATCGGG TERM 842 479234 - 479285 + r 81 -10.9 -3.62032 | gap 2, overlap 479238 AGGGGATTTTGGGAT ATCGA-GC-ACCGGTAGGGGCGACC CGCC GGTCGCCCCTACCGGCAGCCTTCAC TTTCCGCGTTGCTGT TERM 843 479238 - 479280 + r 100 -19.9 -3.28269 | gap 1, overlap 479234 GATTTTGGGATATCG AGC-ACCGGTAGGGGCGACC CGCC GGTCGCCCCTACCGGCAGCC TTCACTTTCCGCGTT Dole_0416 480314 - 479304 - | filamentation induced by cAMP protein Fic TERM 844 479984 - 480002 + g 70 -3.8 -4.59773 | overlap 479968 CGGACATGAGAATCC GGTGTGCT TCC AGCAGATC TTTTTCCGCCTCGGG TERM 845 480365 - 480386 + H 78 -11.5 -3.09015 | TTCCCGGATTTCGTT GGGGCGACC CGCC GGTCGCCCA TTACATCCGTGTCCA TERM 846 481035 - 481053 + G 75 -5.8 -4.64766 | opp_overlap 481033, overlap 481037 AATGGATATTGAAGG CGCCCGGG AGG CCCGGCAG TTTTTGGAATATCCC Dole_0417 480667 - 482046 + | magnesium transporter TERM 847 482068 - 482051 - f 75 -10.5 -3.31726 | opp_overlap 482051 482057, overlap 482049 GCGGGGTATAGAAGA GGCGACC GGCT GGCCGCC GTTTTGTTGGTGTCC TERM 848 482057 - 482069 + F 78 -6.2 -4.75472 | opp_overlap 482051 482049, overlap 482051 TATAGAAGAGGCGAC CGGC TGGCC GCCG TTTTGTTGGTGTCCG TERM 849 482453 - 482443 - g 71 -6.8 -4.1337 | opp_overlap 482442 CCAGACCACAAACAA GGTC TTT GACC GGTATTTCCAGCCCC Dole_0418 482231 - 482539 + | hypothetical protein Dole_0419 482627 - 483076 + | hypothetical protein TERM 850 483138 - 483085 - f 80 -12 -2.77503 | gap 3, opp_overlap 483094, overlap 483075 483077 483082 AGAATGACCGAACCA GTCGCTGAACCGGACTTGGGAAAAAGC TGC GCTTTTTCCCAGG-CCGGTT-AGCT-C AACGTTGGAGCACGG TERM 851 483094 - 483131 + F 100 -20.1 -3.06831 | gap 1, opp_overlap 483077 483085 483082 GAACCAGTCGCTGAA CCGGACTTGGGAAAAAGC TGC GCTTTTTCCCAGG-CCGG TTAGCTCAACGTTGG Dole_0420 483154 - 483702 + | hypothetical protein TERM 852 483752 - 483715 - T 93 -13.5 -3.62046 | gap 1 TGATTGCTCCAACAA GGCCATTGAG-GCGCCGC TTG ACAGCCCGCTCAATGGCC GACGTTACATTCCGC TERM 853 483822 - 483846 + T 80 -6.3 -4.67038 | overlap 483819 TTCATGGGGAGGCGT GCCGAGCCGTA GCT TGCGCGTCGGC TTTTGATTTTGCCCG Dole_0421 486432 - 484267 - | heavy metal translocating P-type ATPase TERM 854 484394 - 484374 - G 70 -2.4 -4.79223 | overlap 484375 CCATATCAGCAAAAA CGGCCTCC CACAT GGTAGCCA AACCAAAGGACCCGA TERM 855 486003 - 485989 - G 78 -2.8 -5.14965 | ATTCTCATCAAAAAA CTGC CCTCGCC GCAG CGTTCGCAGCGCACC TERM 856 486366 - 486394 + g 85 -11 -4.07687 | opp_overlap 486393, overlap 486391 486393 GCAGTTCCCTCTCTA TCTTGGCCGCGC AGGCG GCGCAGTCAAGA TTTTGAACGCGAAAT Dole_0422 487250 - 486450 - | metallophosphoesterase Dole_0423 489253 - 487247 - | serine/threonine protein kinase TERM 857 487540 - 487521 - G 73 -3.5 -4.73682 | opp_overlap 487521 487522, overlap 487522 GCTGATAACAGAAAA TCGGAAC GCTTTG GTTCCGC TTGGTCTTTGGCGCT TERM 858 488259 - 488229 - G 70 -4.7 -4.42386 | gap 1 GGTTCACCCATAAAA TGCCAGGCGGCCAT CGAT ATGACCGAC-AGCA CCGCAACAATGATAC Dole_0424 489558 - 489253 - | hypothetical protein TERM 859 489681 - 489691 + r 70 -2.4 -5.00616 | overlap 489679 AAGACTCATAATTGC GGAG GAT CGCC TTTTTTAGAACCGGG TERM 860 489993 - 490023 + r 100 -19.8 -2.83894 | opp_overlap 489969 489998, overlap 489979 489998 CCCTGATATTCAGGA TGAGACGGCCGGTT TCG ATCCGGCCGTCTCA TCTCCTCATCATGGT TERM 861 490018 - 489998 - R 80 -12.5 -2.83343 | opp_overlap 489993 489979 489998, overlap 489969 ATATTCAGGATGAGA CGGCCGGTT TCG ATCCGGCCG TCTCATCTCCTCATC TERM 862 489998 - 490018 + r 80 -12.5 -2.87944 | opp_overlap 489969 489998, overlap 489993 489979 ATATTCAGGATGAGA CGGCCGGTT TCG ATCCGGCCG TCTCATCTCCTCATC Dole_0425 490413 - 490042 - | zinc-resistance associated protein TERM 863 490393 - 490405 + g 86 -6.3 -4.88129 | opp_overlap 490378 TGCCGTTGCCGCAAT GACAA GAA TTGTC TTTTTCATGATTTTT TERM 864 491148 - 491173 + G 84 -6.9 -4.84359 | gap 1, overlap 491148 491149 GCGCATCGATGATCA G-CGGAACACTT TTG AAGTGTACCGAC TTTTTATGCCGATCA TERM 865 492142 - 492130 - g 78 -4.1 -5.02074 | GCAGCGGCGAAAAAA GTCGA TAT TCAAC TCAATCTTACATCCG Dole_0426 490723 - 492519 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 866 493208 - 493179 - g 84 -7.1 -4.72272 | overlap 493180 493181 493203 TTCGGCCATGAAAAA GGTGCGTTTACCG GTGC CGATAAACGCCGC GAGGGCAGATTCAAG TERM 867 493417 - 493406 - g 75 -5.8 -4.63527 | GGAGGATGTGAAAAA CGGA AAAT TCCG TGAAGACCTTTTCTA Dole_0427 492516 - 493892 + | two component, sigma54 specific, Fis family transcriptional regulator Dole_0428 493970 - 494632 + | peptidoglycan-binding LysM Dole_0429 494943 - 495416 + | zinc-resistance associated protein TERM 868 495472 - 495435 - f 100 -15.6 -4.45151 | opp_overlap 495445, overlap 495437 AAGACGCAACGAAAA GGGTATGACAGGGCGG TAAACG CCGCCCTGTCATGCAC GAAACCAACAGGGAA TERM 869 495470 - 495437 - f 100 -16.8 -2.54881 | opp_overlap 495445, overlap 495435 GACGCAACGAAAAGG GTATGACAGGGCGG TAAACG CCGCCCTGTCATGC ACGAAACCAACAGGG TERM 870 495445 - 495462 + F 71 -10.5 -2.78384 | opp_overlap 495437 495435 GAAAAGGGTATGACA GGGCGGT AAAC GCCGCCC TGTCATGCACGAAAC Dole_0430 495853 - 496218 + | hypothetical protein Dole_0431 496237 - 497820 + | Bilirubin oxidase Dole_0432 499956 - 498097 - | type III restriction protein res subunit Dole_0433 500756 - 499953 - | hypothetical protein Dole_0434 502417 - 500753 - | alkaline phosphatase domain-containing protein Dole_0435 502435 - 503460 + | hypothetical protein TERM 871 503818 - 503774 - T 93 -14.4 -3.44353 | gap 1, opp_overlap 503774, overlap 503779 AAACAAGGGGAAATA GAAAACCCGTCGCCCCCGAGA GTGG TCCCGGAGA-GACGGGTTGTC TTTTTTCAAATGGTG TERM 872 503774 - 503818 + T 90 -7.8 -5.06451 | gap 1, opp_overlap 503774 503779 AAACAAGGGGAAATA GAAAACCCGTCGCCCCCGAGA GTGG TCCCGGAGA-GACGGGTTGTC TTTTTTCAAATGGTG TERM 873 503813 - 503779 - T 100 -12.9 -4.79451 | gap 1, opp_overlap 503774, overlap 503774 AGGGGAAATAGAAAA CCCGTCGCCCCCGAGA GTGG TCCCGGAGA-GACGGG TTGTCTTTTTTCAAA Dole_0436 505173 - 504223 - | hypothetical protein TERM 874 504767 - 504742 - G 85 -15.5 -3.02144 | gap 1, opp_overlap 504740 GGATCGGGTGTAACA GCGCTGCTGGCC GGT GGCCAGCAG-GC GGCCCGGTGTCTCCG Dole_0437 505959 - 505177 - | hypothetical protein Dole_0438 506567 - 505956 - | hypothetical protein TERM 875 506233 - 506256 + g 72 -6.7 -4.4078 | gap 1, opp_overlap 506225, overlap 506228 506234 CAGATCATCAGCCGG TGGCC-GTGC ATGGC GCACAGGCCG TTTTCATTGAGCGGG Dole_0439 507633 - 506560 - | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 876 507299 - 507342 + g 89 -16 -3.33815 | gap 1, opp_overlap 507296 507295, overlap 507300 507301 CTGTGGCCAAAGGGC G-TGTGGCCCAGGTCGTGGCC CAG GGCCACGGCCTCGGCCAGGTC TTCGTTGAGCCGCAT TERM 877 507300 - 507340 + g 100 -19.7 -3.23853 | opp_overlap 507296 507295, overlap 507299 507301 TGTGGCCAAAGGGCG TGTGGCCCAGGTCGTGGCC CAG GGCCACGGCCTCGGCCAGG TCTTCGTTGAGCCGC TERM 878 507301 - 507339 + g 100 -21 -2.54098 | opp_overlap 507296 507295, overlap 507300 507299 GTGGCCAAAGGGCGT GTGGCCCAGGTCGTGGCC CAG GGCCACGGCCTCGGCCAG GTCTTCGTTGAGCCG TERM 879 507624 - 507635 + g 81 -3 -5.28176 | CTTCAAAATCTGAAC GAAT CGAC ATTC TTTTTTCTCCGTACC TERM 880 507978 - 508021 + H 70 -2.2 -4.86731 | gap 1, overlap 507989 507990 GCGGCGCTCCCGGGT GTGCCCGTGGCGC-GGCCAAG CCG CTGGGCCGGTTCTTTTGGCAC TTTTCTTTCCGCCAG TERM 881 507989 - 508009 + H 71 -6.7 -4.2018 | overlap 507978 507990 GGGTGTGCCCGTGGC GCGGCCAAG CCG CTGGGCCGG TTCTTTTGGCACTTT TERM 882 507990 - 508008 + H 73 -10.2 -3.11023 | overlap 507989 507978 GGTGTGCCCGTGGCG CGGCCAAG CCG CTGGGCCG GTTCTTTTGGCACTT TERM 883 508839 - 508829 - g 72 -4.6 -4.59853 | GGAACGTCTGAAAAA GGCC GCC GACC TGTCCAATACATCGC TERM 884 509232 - 509217 - g 71 -11.8 -2.88249 | opp_overlap 509216 GATATTCCTTACACA CCGCCG ACGC CGGCGG ATATGTCCGGCGTGC TERM 885 509427 - 509447 + G 75 -8.9 -4.08216 | overlap 509428 ATCTGCATGGGATCT TCCGTGGGC ACG GCCTGCGGG TTTTCCCGGGCATCG TERM 886 509487 - 509498 + G 70 -2.2 -4.74103 | gap 1, overlap 509487 GTGGTGGCCTTTATC GG-GG ATT CCACC TTTTTCCATTCCGGC Dole_0440 508158 - 510020 + | thiamine pyrophosphate binding domain-containing protein Dole_0441 510070 - 510675 + | indolepyruvate ferredoxin oxidoreductase TERM 887 510947 - 510925 - f 75 -10.6 -3.33094 | opp_overlap 510918, overlap 510923 510919 CATACAGAAGTAAGA GGTGGTAACA AAT TGTAACCACC TTAACAATTTAAAAG Dole_0442 511044 - 511238 + | hypothetical protein Dole_0443 511235 - 511591 + | HicB family protein Dole_0444 511883 - 512101 + | hypothetical protein TERM 888 513568 - 513547 - g 85 -3.1 -5.43487 | overlap 513540 513549 AAAGCAGAGAAAAAA TTTTTCATA TATA TATGAAAGA AAACAGAAGCTAACA Dole_0445 513192 - 513581 + | hypothetical protein TERM 889 513608 - 513618 + F 71 -8.2 -3.68366 | overlap 513595 513604 ACCCGGACTCGCAGG GGCG GGC CGCC TTGGTTTTGGCATAG Dole_0446 513719 - 514300 + | Cro-like protein TERM 890 514930 - 514953 + G 72 -9.7 -3.64703 | opp_overlap 514930 AGCCGTACAAGGAAA CGAATACCA GATATA TGGTATTCG TTTAAATGCAGAGAG TERM 891 514953 - 514930 - g 78 -9.7 -3.99678 | opp_overlap 514930 AGCCGTACAAGGAAA CGAATACCA GATATA TGGTATTCG TTTAAATGCAGAGAG Dole_0447 514385 - 514981 + | hypothetical protein Dole_0448 517117 - 515117 - | exoribonuclease II TERM 892 515383 - 515411 + g 76 -13.9 -2.76964 | opp_overlap 515377, overlap 515378 CGTAGGAGAGGGGCT GCTGCAGCATCTG CAT CAGGTGCTGCAAC TGGTCTTCGGTGTAA TERM 893 515830 - 515847 + g 78 -4 -5.00616 | GAATCTCGATGAGCA GGGCCC CGTCGC GGACCC TTTTTTCACGCAACC TERM 894 516590 - 516601 + g 90 -7.2 -5.03145 | overlap 516578 516577 CATGGGCGGCGGGGT GCCG GCGC CGGC TTTTTTGAGCCATTC TERM 895 517194 - 517236 + H 87 -6.8 -5.06816 | opp_overlap 517174 517184 517201, overlap 517197 517199 517200 AATAACCGCCGATTC AGGGAAACGGGAGGCCGGTT CAG GACCGGCCTCCCGCATGTTA TTTTTCTTGACAGAT TERM 896 517197 - 517233 + H 100 -12.9 -4.63592 | opp_overlap 517184 517201, overlap 517194 517199 517200 AACCGCCGATTCAGG GAAACGGGAGGCCGGTT CAG GACCGGCCTCCCGCATG TTATTTTTCTTGACA TERM 897 517199 - 517231 + H 100 -15.5 -3.91737 | opp_overlap 517184 517201, overlap 517197 517194 517200 CCGCCGATTCAGGGA AACGGGAGGCCGGTT CAG GACCGGCCTCCCGCA TGTTATTTTTCTTGA TERM 898 517200 - 517230 + H 100 -19 -2.93415 | opp_overlap 517184 517201, overlap 517199 517197 517194 CGCCGATTCAGGGAA ACGGGAGGCCGGTT CAG GACCGGCCTCCCGC ATGTTATTTTTCTTG TERM 899 517229 - 517201 - H 100 -21.8 -3.6682 | opp_overlap 517200 517199 517197 517194, overlap 517184 GCCGATTCAGGGAAA CGGGAGGCCGGT TCAGG ACCGGCCTCCCG CATGTTATTTTTCTT Dole_0449 517312 - 517833 + | hypothetical protein TERM 900 518149 - 518138 - g 70 -2.2 -4.77165 | overlap 518145 518146 TCCGGCAGAACAAAA TCGA CAAC CCGA ACACCACCGGCGGGG TERM 901 518392 - 518403 + G 70 -2.2 -4.84359 | overlap 518397 AGCGCGGACGCCTTT TTCC GGGT GGAG TTTTTCTCCCCCTAC Dole_0450 517894 - 518922 + | nitrate reductase gamma subunit TERM 902 519691 - 519678 - g 77 -2.3 -5.1356 | opp_overlap 519678, overlap 519672 CCCGATGAACAAAAA GGGTG CCGA CATCC TTTTTATCACGCCGT TERM 903 519678 - 519691 + G 76 -4.5 -4.83169 | opp_overlap 519672 519678 CCCGATGAACAAAAA GGGTG CCGA CATCC TTTTTATCACGCCGT TERM 904 519817 - 519837 + G 77 -2.5 -5.08824 | overlap 519818 TGGAGCACCTACGCT TCCGAGG GCGGCAA CTTCGGG TTTTTTACCTCCCAC TERM 905 520529 - 520540 + G 71 -7.2 -4.11216 | GAACCATGGATTTAC GCGG AGAA CCGC TTTTAGGCATGGAGG Dole_0451 518923 - 520572 + | 4Fe-4S ferredoxin, iron-sulfur binding Dole_0452 520562 - 520951 + | cytochrome c family protein Dole_0453 520951 - 521784 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 906 522516 - 522498 - g 79 -13.2 -3.35046 | opp_overlap 522500, overlap 522496 TGACGCCGGCAAAGA GGCGATTC AGG GAATCGCC CGCATCGTGACTTAC Dole_0454 521806 - 522975 + | polysulphide reductase NrfD TERM 907 523004 - 523024 + T 100 -18.3 -6.14618 | opp_overlap 523004 CAACCAAAACAAAAA GGGCGCCGA TAT TCGGCGCCC TTTTTTTGTTTTATC TERM 908 523024 - 523004 - T 100 -18.3 -5.54338 | opp_overlap 523004 CAACCAAAACAAAAA GGGCGCCGA TAT TCGGCGCCC TTTTTTTGTTTTATC Dole_0455 523884 - 523090 - | methyltransferase type 11 Dole_0456 525079 - 523994 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 909 524443 - 524426 - G 76 -4.8 -4.7373 | overlap 524427 GTAGGTGATGAAAAA CTCGGC GGTCTT GCCGAA GAAAAGGCAGTTTTT TERM 910 524972 - 524957 - G 71 -7.5 -4.18934 | GAGCAGTTGAACAAA CCCGG CCTGTT CCGGG GTCATGATGTTTTTC Dole_0457 525717 - 525097 - | TetR family transcriptional regulator TERM 911 525132 - 525167 + g 73 -11.8 -3.1319 | gap 1, opp_overlap 525120, overlap 525122 AATTGCCCAGGCTGG CCCAGGCGGCTGCCGCA AGA TGCCG-GGCCGCCTCGG TTACATCGGTTTTGG TERM 912 525452 - 525464 + g 77 -10.5 -3.83378 | opp_overlap 525442 525441 525452 525451 525450 ACAATGGCAAAAATG CCGCC TTT GGCGG TTGTCTCTTTTGAGA TERM 913 525574 - 525591 + g 77 -2.5 -5.04385 | GTGGTGATACACGCT GCCGGTG CTGG CCCCTGC TTTTTTGCAGATATC TERM 914 525715 - 525754 + g 100 -8.8 -5.40474 | overlap 525717 GGTGTTGGGCTTTTT CATGACTAGAATTATATT TTAG AATTTGATTCTAGTCAAG TTTTTTTCGGGACAT TERM 915 525839 - 525819 - R 100 -18.3 -5.67063 | opp_overlap 525795 525819 TTTACCACAAAAAAA GGGCGCCGA TGT TCGGCGCCC TTTTTGTTTTTATCT TERM 916 525819 - 525839 + r 100 -18.3 -5.71295 | opp_overlap 525819, overlap 525795 TTTACCACAAAAAAA GGGCGCCGA TGT TCGGCGCCC TTTTTGTTTTTATCT TERM 917 525880 - 525890 + r 76 -2.4 -5.26875 | CGGTGTGCGGCTATT CGGC GTC GCCC TTTTTTGCTTCCGGC Dole_0458 526840 - 525875 - | methylenetetrahydrofolate reductase Dole_0459 527270 - 526887 - | hmc operon protein 6 Dole_0460 527984 - 527316 - | hypothetical protein TERM 918 527593 - 527579 - G 74 -2.1 -5.00616 | gap 1, overlap 527580 CCCGTTCGTAAAAAA TCC-GG CGCA CCAGGA AATATCCGGCGCAGG Dole_0461 528685 - 528005 - | hypothetical protein TERM 919 528694 - 528707 + r 75 -5.3 -4.69324 | overlap 528687 TGACCAATTGGGGCC TCCAT ATTT ATGGA TTTATTCTTTATTCT Dole_0462 529123 - 528716 - | cytochrome c class III Dole_0463 529533 - 529850 + | DsrC family protein TERM 920 529906 - 529880 - f 100 -18.2 -3.99324 | opp_overlap 529880 CGGCATGACCAGAAA GGGTCTTGGAAA GAC TTTCCAAGACCC TTTTTTTCATGGCGG TERM 921 529880 - 529906 + F 100 -18.2 -5.52384 | opp_overlap 529880 CGGCATGACCAGAAA GGGTCTTGGAAA GAC TTTCCAAGACCC TTTTTTTCATGGCGG TERM 922 529942 - 529965 + F 87 -10.9 -4.07568 | TTAACCTCCGCCTCA GGACGGCGC ACAGGC GCGCCGGCC TTTTCAGGGGAAACA TERM 923 530136 - 530156 + G 75 -5.3 -4.63218 | overlap 530138 AAAGCGGGAGGGCAT TATCCGGCG CAT CGGCGGAAA TTTTGTTCCGGAAAA Dole_0464 529984 - 530436 + | AsnC family transcriptional regulator TERM 924 530583 - 530563 - g 71 -8.1 -4.07568 | opp_overlap 530562 530572 530578 CGGTGGGTGGGAAAA GCCGCGGCC CGG GGCGCCGGC ATCGTCTGCTTTCCG Dole_0465 530470 - 531288 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Dole_0466 532022 - 531264 - | tRNA pseudouridine synthase A TERM 925 531369 - 531382 + g 100 -8.1 -5.40072 | opp_overlap 531363 CGCCAGAATGTCGGC CACCG CTTC CGGTG TTTTTTTCCCCAGCC TERM 926 531604 - 531621 + g 79 -5.5 -4.8048 | opp_overlap 531583 AGGGCCGCCGTCATG GCCCC AAGATCAA GGGGC TTTTTGATGTGCCAC Dole_0467 533535 - 532231 - | FolC bifunctional protein TERM 927 532300 - 532323 + g 87 -3.6 -5.45726 | opp_overlap 532297 532301, overlap 532301 GGCCACGTAAAGGGA ACCGGCCACG CAGA CGGCGCCGGA TTTTTTTGGCGTGTG TERM 928 532888 - 532899 + g 87 -3.6 -5.4477 | overlap 532880 GCCGAGCCGGTACAG CGGG GCCG CCTG TTTTTTTGCAACTTT TERM 929 533216 - 533185 - G 81 -12.2 -3.65046 | GGTGTATTCGAAGAA GGTGGGTTCCCGGC CGTC GCCGGAAAGCCCCC GGACCGCCTTGCAGG TERM 930 533572 - 533550 - R 100 -15.6 -5.40072 | opp_overlap 533550 TGGGCCGTAAAAAAA CCCGGCCAAC CGT GTTGACCGGG TTCTCCTTCAAAATT TERM 931 533550 - 533572 + r 91 -13.4 -3.51597 | opp_overlap 533550 TGGGCCGTAAAAAAA CCCGGCCAAC CGT GTTGACCGGG TTCTCCTTCAAAATT Dole_0468 533814 - 533608 - | ribosomal protein S21 TERM 932 533834 - 533862 + r 78 -7.6 -4.43832 | opp_overlap 533845, overlap 533831 ATCACCCTTTCTTTG CCGTTTGAAA GGTTTGTTG TTTCAAACGG TTATTTTATCTCTTC TERM 933 533987 - 533956 - R 100 -16.6 -5.64274 | TGAGGCAGAAAAAAA TCATGCCCGGCGCC TGAC GGAACCGGGCATGA TCAGATGTGGGGTGT Dole_0469 534717 - 534043 - | adenylate kinase TERM 934 534401 - 534411 + g 90 -6.8 -5.03314 | overlap 534396 ACCACGATGTCCAGC GCCA TGT TGGC TTTTTTCAGGGTCGC TERM 935 534968 - 534979 + H 71 -3 -4.8622 | TAACCTGCTAGTCAG TATG CCTT CATA TTTTTCATTAGCACA TERM 936 535313 - 535325 + G 83 -4.8 -5.0538 | CGCTGGAGGTCCTTT CCGA CGGGT TCGG TTTTTTACGGTCCCC TERM 937 535915 - 535902 - g 74 -2.4 -4.91109 | opp_overlap 535902, overlap 535903 535906 GGTGGAGCATAAAAA GGAT GTGGTG ATCC TGCTTGACAGCATCA Dole_0470 535141 - 536385 + | transcription termination factor Rho Dole_0471 536619 - 536840 + | ribosomal protein L31 Dole_0472 536892 - 537962 + | peptide chain release factor 1 TERM 938 538280 - 538290 + G 72 -4.6 -4.56597 | opp_overlap 538280 AGTGCCTGGTGGAAA CGGC CCT GTCG TTTTTGGCCGGACCC TERM 939 538364 - 538330 - g 73 -11.2 -3.34517 | opp_overlap 538356, overlap 538328 538331 ACCCCGGCCGAAAGA TGGGTGCTGGAGCCGG CCA CCGGCTCCGGCGCCGT GGTGCTGGCCCTGGC TERM 940 538363 - 538331 - g 78 -14.7 -2.60496 | opp_overlap 538356, overlap 538330 538328 CCCCGGCCGAAAGAT GGGTGCTGGAGCCGG CCA CCGGCTCCGGCGCCG TGGTGCTGGCCCTGG TERM 941 538391 - 538401 + G 83 -8.2 -4.70879 | opp_overlap 538385, overlap 538356 TGGCAAAGAGCCATC CCGG CTG CCGG TTTTTCGCCTTTGAC TERM 942 538824 - 538798 - g 75 -8.7 -4.07568 | gap 1 GTGGGGTTTGCAAAA GACCTCGCCGGT CACC ACCGG-GTGGTC CACATGCAACGGGCC Dole_0473 537952 - 538845 + | HemK family modification methylase TERM 943 538857 - 538834 - f 82 -12.4 -3.12351 | opp_overlap 538833 538832, overlap 538848 GTGGTCCACATGCAA CGGGCCGG ATGATAGA CCGGCCCG GCTTGTCAAAAGAGG TERM 944 539429 - 539390 - g 76 -5.1 -4.74215 | gap 1, overlap 539391 AGACCATCAAGAAAA GCATCGACCAGCTGCACT ACTTG AATG-AGCTGGTCAACGA CGGCTCCATCGAGCG Dole_0474 539062 - 539976 + | ribosomal protein S2 Dole_0475 540012 - 540608 + | translation elongation factor Ts Dole_0476 540612 - 541349 + | uridylate kinase TERM 945 541373 - 541353 - f 73 -10.3 -3.11178 | overlap 541355 CAATCAATCTGAACA GACGGCGGC CCG GCTGCCGCC GCGGTGAGGAAAAGG TERM 946 541374 - 541355 - f 82 -12.1 -3.10879 | overlap 541353 ATCAATCTGAACAGA CGGCGGC CCGGCT GCCGCCG CGGTGAGGAAAAGGC Dole_0477 541391 - 541948 + | ribosome recycling factor Dole_0478 541938 - 542681 + | undecaprenyl diphosphate synthase TERM 947 542946 - 542972 + G 78 -4.3 -5.00884 | gap 1, overlap 542950 542951 GAAGGTTTGACGTGA TCTGCCTGGCCG CGTC CGGCCTG-CTGA TTTTTTCCGGCGCCT TERM 948 543009 - 543020 + G 79 -7.2 -4.57569 | overlap 543005 TGGTCGAGTACCGGG CCGG CAAC CCGG TTTTTGAGCGGGTGC TERM 949 543414 - 543443 + G 70 -3.6 -4.56597 | gap 1, opp_overlap 543419, overlap 543418 AATCGACCATGAAAA GAGATGCCGGAAT AAAGG ATTCAGGCG-CTC TTTTTCCCGGCCACG Dole_0479 542702 - 543541 + | phosphatidate cytidylyltransferase TERM 950 543604 - 543617 + G 72 -4.5 -4.65895 | overlap 543600 543599 CTGAAGGTGGTGTCG CGGTT TTGC GACCG TTTTTCCGTGGAGGC TERM 951 543758 - 543769 + G 79 -5.8 -4.72272 | overlap 543755 TGCCGGCCGGGTCGC GCAC CGAG GTGC TTTTTGGTGAAGCCG TERM 952 544513 - 544538 + G 74 -2.4 -5.00616 | overlap 544517 CCGGCGGTGCTCAAC GCGGCCAACG AGGTGG CGGTGGATGC TTTTTTGCGCGAGGC Dole_0480 543538 - 544689 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 953 544667 - 544678 + F 73 -7.2 -4.27584 | opp_overlap 544667, overlap 544656 CGTGGGCCAGGCAAA GGGC CGGC GCCC TTTTACCTTAAGCGT TERM 954 545205 - 545221 + G 83 -15.1 -2.78384 | opp_overlap 545204 545203 GTGATGCCGGAAAGC CCGGCCG CGG CGGCCGG TATGCTGGCCGGGGA TERM 955 545603 - 545645 + G 81 -8.8 -4.30933 | overlap 545620 TCTGATCGCCCAGAT GGCCGGGGAGCAGGCCCGGC AGG GCAGCGCCAGCCTGCTGGCC TTTATTGCCTTTATC Dole_0481 544794 - 545861 + | putative membrane-associated zinc metalloprotease TERM 956 547171 - 547160 - g 75 -3.6 -4.82901 | overlap 547162 GCCCTCGGACAAAAA GACC ACGC GGCC CGACGACCTGATCGT TERM 957 547873 - 547920 + G 73 -11 -3.44146 | TCAAGCCCCTGGTGG GCGCGGACCGGGACATTGCCTC GGAC GCGGCCGTGACCCGGCCGGTGC TTGCTTCTGAAAAAG Dole_0482 545871 - 548867 + | phosphoribosylformylglycinamidine synthase TERM 958 549606 - 549620 + G 100 -12.8 -5.0925 | opp_overlap 549596 AAAAGGCCGTCCGGT CCGGGC AAA GCCCGG TTTTTGCTTTTCCCA Dole_0483 548864 - 549694 + | phosphoribosylformylglycinamidine synthase TERM 959 550160 - 550149 - g 87 -7.2 -4.90778 | overlap 550150 550151 CCGAGGTAAACAAAA CCGG GGCT CCGG TGCAGGCCAAGCTGG TERM 960 550644 - 550627 - g 72 -6.2 -4.26076 | GGACCGCTACGAAAA CAGCCG CAAACC CGGCCG AAAATTTGCAAGCGC TERM 961 550815 - 550854 + G 71 -10.8 -3.55444 | gap 2, opp_overlap 550789 CCGATGGTCCTCACC GGGGCGCCATT-CC-CCG CATGGC CGGTGGCAGTGGCGCTCC TTTAACCGGTGCCGG Dole_0484 549746 - 550966 + | hypothetical protein TERM 962 551073 - 551048 - T 100 -15.5 -5.21236 | AACCGACAATAAAAA CCCGGACGCTT CAGA AAGCATCCGGG CGGCAAGGGCGGGGC Dole_0485 551726 - 551100 - | hypothetical protein TERM 963 551236 - 551247 + g 70 -2.2 -4.84359 | AACAGCTCTTTTTCT TGCT GATA AGCG TTTTTCTGCGCCTGG TERM 964 551907 - 551894 - H 80 -3.8 -5.30575 | TAAAAATGTAAAAAA CGCT CTGTCC AGCG GTATCATCAAACCCC TERM 965 552375 - 552404 + G 83 -7.7 -4.62069 | overlap 552374 TCTGCGGGGCAATAT GCCGCCGGGGGTA GAGA TGTCGGCGGCGGC TTTTTCCGCTCCAAA Dole_0486 552061 - 552564 + | pilin assembly protein Dole_0487 552575 - 553354 + | Tfp pilus assembly protein PilW-like protein TERM 966 553463 - 553478 + G 78 -9 -4.18494 | CCTTATCGAGGTGCT GATGGC TGTG GCCATC TTTTCCATCGGGGTG Dole_0488 553377 - 553862 + | hypothetical protein TERM 967 553931 - 553912 - g 83 -7.8 -4.6902 | overlap 553903 TGATAATCTGAAAAA CCAGAACG GGTC CGTGCTGG CGCTGGTGCTGATGG Dole_0489 553859 - 554380 + | hypothetical protein TERM 968 554391 - 554409 + F 86 -13.8 -3.04144 | overlap 554388 TTTAGAGATTTTCAG GCGGCCGG GTT TCGGCCGC TATTCAGCATCACCA TERM 969 554497 - 554510 + G 86 -4.5 -5.22006 | overlap 554490 554486 554495 GGGCCGTGCCGTTCG GACGG TCGT CTGTC TTTTTGTTCTCCTGC TERM 970 555169 - 555181 + G 77 -10.5 -3.91072 | CCATACCGCCAGTGC CCCGG CCG CCGGG TTTGTCACGCTTTCC TERM 971 558775 - 558765 - g 71 -6.8 -4.14392 | opp_overlap 558764 TTCGAAGCTCCAAAA CAGG CAA CCTG CTGATCTTCATGTCC Dole_0490 554441 - 559078 + | Pyrrolo-quinoline quinone TERM 972 559096 - 559125 + F 100 -23.7 -4.07568 | opp_overlap 559113 GGGTTGTGTGCACAT GCGGGAAGCCCTG AAGA CAGGGCTTCCCGC TTTTAAAAAAAGGAG Dole_0491 559149 - 559484 + | hypothetical protein TERM 973 559507 - 559550 + T 100 -18.2 -5.31877 | opp_overlap 559507 GGAGTTTAAACGAAA GCGGCTCCGGTTGTCTCTTT TTAC AGGGTGACAACCGGGGTCGC TTTTTTATAATGCAT TERM 974 559550 - 559507 - T 81 -9.5 -4.07246 | opp_overlap 559507 GGAGTTTAAACGAAA GCGGCTCCGGTTGTCTC TTTTTACAGG GTGACAACCGGGGTCGC TTTTTTATAATGCAT Dole_0492 560400 - 559555 - | hydrolase TERM 975 559688 - 559707 + g 81 -3.4 -5.2422 | opp_overlap 559686 559682 559683, overlap 559687 559690 559692 GTCTGAAAACCGACG GCCCTGGC CGGG GCCATGTC TTTTTTCATGTCATT TERM 976 559909 - 559938 + g 100 -4.9 -6.19302 | opp_overlap 559928 CAGGGGCGTGTAAAA CTGGGCGTTGG AGACAATA CCGGCGGCCAG TTTTTTTTGTTCTAT Dole_0493 561797 - 560397 - | hypothetical protein TERM 977 560986 - 560974 - G 77 -7.7 -4.2687 | TCTAAAAAGGAGAAA CCGAA TCC TTCGG TGATGCTGGTGGTGA TERM 978 561579 - 561614 + g 71 -12.4 -2.88249 | AATGGCGGCCAGGAT TCGGTCGGCCCCGGCC GCCG GGTCGGTGCAGGCCGG TGTGTCGGGCCTGTC TERM 979 561634 - 561655 + g 72 -5.1 -4.56597 | gap 1, opp_overlap 561634 TCGGGCCTGTCATAA CCGATGTCGG CCA CC-ACCTCGG TTTTTACCGCCAGAG TERM 980 561973 - 561986 + r 82 -5.2 -5.0133 | opp_overlap 561966 561963, overlap 561972 GGAATCAAGCTCCCC CGGC CGGGCC GCCG TTTTTTCGGCGGCTG Dole_0494 562634 - 562038 - | hypothetical protein TERM 981 562852 - 562823 - H 100 -7.2 -5.9873 | gap 1 GTAGCACAAAAAAAA CGCGGCCTGGATT TTTTT AATTCAGGC-GCG TAAAAGAAAAATTCG TERM 982 562886 - 562864 - H 81 -3.4 -5.45802 | opp_overlap 562864 562878, overlap 562865 562866 CGCGTAAAAGAAAAA TTCGTCCTGT CAT ACAGGAGCAA TCCTGTTTTATGATA TERM 983 562878 - 562891 + H 74 -6.7 -4.46926 | opp_overlap 562866 562864 562865, overlap 562864 ATTCGTCCTGTCATA CAGGA GCAA TCCTG TTTTATGATACAGTC TERM 984 563155 - 563134 - g 79 -7.3 -4.62069 | gap 1 GGCCTACCTGAAAAA CACCACCGGC CTG GCC-ATGGTG GAAGCATCCGTGGAT TERM 985 563711 - 563731 + G 74 -11.1 -3.54919 | overlap 563708 TTTGCCGGCCTGGGC CGGCACCGG CGT CTGGTGCTG TTTGACACGCTGATT Dole_0495 562967 - 564208 + | Ste24 endopeptidase Dole_0496 565130 - 564444 - | exsB protein TERM 986 565055 - 565072 + g 73 -11.3 -3.33492 | TAAACCCCTGGGATA CGGCCAT GGCC ATGGCCG TTGTGGAGTCAATGC Dole_0497 565765 - 565127 - | radical SAM domain-containing protein TERM 987 566127 - 566151 + r 75 -11.5 -2.65774 | overlap 566126 TCGAATTGTATTTAC GGCGATACTCT CAA AGAGTATCTCC CTTATCCTGCCTATC TERM 988 566399 - 566413 + r 76 -7.1 -4.32951 | opp_overlap 566391 AAAAATATTGTTTCC CCAGC AACAA GCTGG TTTTAAATCTTATTT TERM 989 566621 - 566598 - R 100 -18.2 -5.63504 | AACCTTATAAAAAAA GGGGACGCGA CAGG TCGCGTCCCC GAATGGGAAAAAATG Dole_0498 567061 - 566726 - | preprotein translocase, SecG subunit TERM 990 566966 - 566983 + g 72 -9.8 -3.74077 | GCCGCCGCCGAAGGT GGCGCC CATGCC GGCGCC TTTGCCTGTCTGCAG Dole_0499 567839 - 567084 - | Triose-phosphate isomerase Dole_0500 569109 - 568105 - | glyceraldehyde-3-phosphate dehydrogenase, type I Dole_0501 569581 - 569111 - | ribosomal-protein-alanine acetyltransferase Dole_0502 569987 - 569571 - | PTS system fructose subfamily IIA component Dole_0503 570865 - 569984 - | hypothetical protein TERM 991 570238 - 570251 + g 90 -8.1 -4.98255 | CATGGGCGGCCACGT CGGCA TCCG TGCCG TTTTTATGCTTCAGG TERM 992 570618 - 570599 - G 74 -2 -5.00616 | CCCGGCTTCAAAAAA GAGAACGG TCAG CCGGTATC CCTGGGCCTTGAGGT Dole_0504 571330 - 570872 - | putative PTS IIA-like nitrogen-regulatory protein PtsN Dole_0505 571845 - 571510 - | sigma 54 modulation protein/ribosomal protein S30EA Dole_0506 573299 - 571857 - | RNA polymerase, sigma 54 subunit, RpoN Dole_0507 574023 - 573301 - | ABC transporter-related protein Dole_0508 574634 - 574038 - | OstA family protein Dole_0509 575206 - 574634 - | hypothetical protein Dole_0510 575755 - 575231 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 993 575322 - 575346 + g 72 -4.9 -4.56775 | opp_overlap 575338 CCCCTGCCGCCCGGC GCACGGGTG ACAAAAG CGGCCGTGC TTTTTACCGCCGGAT Dole_0511 576587 - 575748 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 994 576158 - 576174 + g 85 -2.1 -5.49569 | overlap 576160 GGGTGATGTCCCAGG GCGCCAG GAA CTGCCCC TTTTTTATATTGATG TERM 995 576865 - 576877 + H 74 -4.1 -4.85782 | opp_overlap 576861, overlap 576866 TTTTTAAACAGCCGG TCGTT TGG AACGG TTTCTTTTTGCAAGG TERM 996 577828 - 577846 + G 74 -11.6 -3.57144 | TATCCGGCTGCCCAA CGCGGCCC CCA GGGCCGGG TTTGCCGATCAGCGG TERM 997 577972 - 577988 + G 71 -8 -4.07568 | CGGCCGTGTGGTGTT TGCCGA CTGGA TCGGCA TTTTCGGAAAAACCG TERM 998 578019 - 578001 - g 72 -4.5 -4.57569 | GCATTTTCGGAAAAA CCGTGGT GATCG ATCACGG GTGCGGGCTGTTTTC Dole_0512 576902 - 578263 + | peptidase M23B Dole_0513 578308 - 578958 + | signal peptidase I Dole_0514 578968 - 579903 + | aspartate carbamoyltransferase TERM 999 580676 - 580642 - g 75 -5.6 -4.62069 | gap 1, opp_overlap 580642, overlap 580643 580644 TCGGGAGGCCAAAAA GCGGGGC-GTGCCCG TGACCG CGGAAACAGCCCCCC ATTTTTTCATGCTTA TERM 1000 581109 - 581092 - g 78 -6.3 -4.56597 | gap 1, overlap 581095 CTCCCTTGGGAAAAA CACCCCGT TTG ACGGG-TG GGAGCTTTCCGGCCG Dole_0515 579890 - 581179 + | dihydroorotase, multifunctional complex type TERM 1001 581167 - 581192 + F 100 -7.5 -5.80951 | gap 1 GGTGATTTTTGACGG CCTGACC-GCGT GAT ACGCCGGCCGGG TTTTTTGTTTTCAAT TERM 1002 582296 - 582252 - g 82 -10.7 -4.20883 | gap 1, overlap 582254 GAAAAATTTTCAAAA GACCTGGGCA-AGGAGGTGA TTAAGC TCTCCTCCTATGCCCTGGAC ATGCTGGAAAAATAC TERM 1003 582294 - 582254 - g 81 -11.9 -3.68674 | gap 1, overlap 582252 AAAATTTTCAAAAGA CCTGGGCA-AGGAGGTGA TTAAGC TCTCCTCCTATGCCCTGG ACATGCTGGAAAAAT Dole_0516 581241 - 582647 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 1004 582942 - 582967 + F 83 -4.8 -5.1971 | gap 1 TATTATGTTTTATCT GGGTGCTTATT GAAAA AATG-GCACCC TTTTTGCTTTTTAGT Dole_0517 583148 - 583603 + | tfp pilus assembly protein, major pilin TERM 1005 583631 - 583650 + F 100 -15 -6.11229 | opp_overlap 583631 AGCAGGTTTTAAAAA GGGGAGGC ATTT GCCTCCCC TTTTTTTGTTTTCGT TERM 1006 583650 - 583631 - f 100 -15 -4.58663 | opp_overlap 583631 AGCAGGTTTTAAAAA GGGGAGGC ATTT GCCTCCCC TTTTTTTGTTTTCGT TERM 1007 584711 - 584723 + G 80 -4.7 -5.00616 | AGCGTTTTCAATCCG CCCGC GCA GCCGG TTTTTTCAGAAACGG TERM 1008 585574 - 585559 - g 75 -5.4 -4.58685 | opp_overlap 585528, overlap 585548 585529 AAACGTGTTTAAAAA CAACAC CCGG GTGCTG TATGAAGAGAACAAT Dole_0518 583988 - 585619 + | dolichyl-phosphate-mannose-protein mannosyltransferase protein TERM 1009 585640 - 585653 + F 79 -2.3 -5.40072 | overlap 585641 GGAAGGACCGGGACC ATGCG CGCG CGCAA TTTTTTTAAGCAGGG TERM 1010 585687 - 585703 + G 87 -7.3 -4.98857 | overlap 585676 CCCGCTGGCCTATGG CTGGTAT TTC ATACCGG TTTTTGTCATTGCGT TERM 1011 585948 - 585964 + G 80 -4.4 -4.91109 | gap 1, opp_overlap 585948, overlap 585950 CACCGCCGGCAGAAA GC-GGGT CTGG ACCCTGC TTTTTGTCATCAGCC TERM 1012 586378 - 586391 + G 89 -2.4 -5.7946 | TACATGTGTTTTCAA TGCA AAAAAA TGCA TTTTTTTCTTCGGCG Dole_0519 585640 - 586812 + | vitamin K epoxide reductase TERM 1013 587059 - 587031 - g 71 -6.9 -4.13767 | gap 1 TTTGCCACGGGAAAA GCCAG-AAATCA TAACCG TGATTTTCTGGC CGGCCTGGGCGTGGA TERM 1014 587629 - 587641 + G 72 -4.7 -4.56597 | overlap 587613 587616 CCGGCGACGTGTGCC GCGCC TTT GACGC TTTTTACCAGAAGCG TERM 1015 587762 - 587751 - g 79 -7.2 -4.62471 | opp_overlap 587751 CTCAACGGCGAAAAA CCGG ACAT CCGG TTTGGCCCGGACCGG Dole_0520 586890 - 587945 + | NAD-dependent epimerase/dehydratase Dole_0521 587942 - 588670 + | nucleotidyl transferase TERM 1016 589654 - 589632 - g 85 -2.6 -5.64274 | TGATCCACAAAAAAA CAGGCTGG ATCGTGA CCACCCCG GACGATTTAAGACAG Dole_0522 588680 - 589816 + | glycosyl transferase group 1 Dole_0523 589813 - 590730 + | NAD-dependent epimerase/dehydratase TERM 1017 591610 - 591599 - g 74 -2.2 -5.02074 | TCAGCCTTCAAAAAA GACG CCCG CATC TGGAAAGAAATTTAT TERM 1018 591704 - 591717 + G 81 -3.8 -5.06414 | CAGGCAACACGGCGA GCCT CCTTAA AGGC TTTTTATTCGACGCA Dole_0524 590753 - 591793 + | glycosyl transferase family protein TERM 1019 591853 - 591836 - g 72 -4.7 -4.65895 | TGTGGCATGGAAAAA GCAGACG ATAT CGCCGGC CGGGGCGCAACACCG Dole_0525 591827 - 592684 + | glycosyl transferase family protein Dole_0526 593600 - 592707 - | glycosyl transferase family protein TERM 1020 592767 - 592781 + g 75 -4.2 -4.85782 | opp_overlap 592769, overlap 592769 TTCTGCTTTCGAGAT AACAGC GGC GCTGTA TTTATTTTTCCAGGG TERM 1021 593361 - 593375 + g 78 -8.6 -4.15044 | opp_overlap 593354 AAAAACATCGCCGCC GGCTTT TGT AAAGCC TTTGTTGACCGCAAA Dole_0527 594388 - 593651 - | FkbM family methyltransferase TERM 1022 594300 - 594321 + g 79 -7.3 -4.56597 | opp_overlap 594300 594299, overlap 594303 GAATTTATGTTAAAG TCATCAGCC TGGC GGCTGATAA TTTTTGCACCGACAG Dole_0528 595534 - 594428 - | glycosyl transferase group 1 Dole_0529 596308 - 595556 - | hypothetical protein TERM 1023 595884 - 595906 + g 70 -2 -4.7254 | opp_overlap 595901 595903, overlap 595885 TTCATGCCGAGATAG CTCTTTTGTT CAT AACAGAGGAA TTTTTCATCCCCGGT Dole_0530 596960 - 596310 - | hypothetical protein Dole_0531 598061 - 597174 - | methyltransferase type 11 Dole_0532 599527 - 598178 - | polysaccharide biosynthesis protein TERM 1024 598852 - 598867 + g 72 -5.4 -4.52589 | gap 1, opp_overlap 598852 TCTTGGCGCGATAGA GCCTCGG CCG CC-AGGC TTTTATATCACCGCC Dole_0533 600086 - 599535 - | hypothetical protein TERM 1025 599601 - 599635 + g 83 -4.4 -5.02715 | overlap 599589 599632 CGTGGGCTCAAAGGA TTTGAACTCTTCTATT GTT AATACAAGGGTGCGAA TTTTTCGTTTGATGT TERM 1026 600048 - 600027 - G 83 -5.1 -5.10461 | gap 1, opp_overlap 600039, overlap 600039 TGGATTGAAGAAAAA CCGCA-CCAG AAG CCGGATACGG GTTTTTGATGAGATG TERM 1027 600039 - 600049 + g 70 -2.4 -4.7373 | opp_overlap 600027 600039 AAACCGCACCAGAAG CCGG ATA CGGG TTTTTGATGAGATGA Dole_0534 601037 - 600321 - | glycosyl transferase family protein TERM 1028 600507 - 600525 + g 70 -2.3 -4.72272 | CCGGGGTTCTTCAAT GGTGATG CCCTC CAGCGCC TTTTTGGTGAAAACC TERM 1029 600649 - 600635 - G 73 -11.4 -3.33798 | overlap 600633 600631 600638 AGTGCCAGAAATAGA GCACCC GGT GGGTGC CGGAACCGGCAAACC Dole_0535 602005 - 601040 - | glycosyl transferase family protein TERM 1030 601151 - 601112 - G 83 -9.2 -4.2687 | opp_overlap 601112, overlap 601105 GGCAAAAAGGATAAA CTGGCTGGCCGACATG AAAGAGAA CATGGCGGCCAGCGCG TTGATGGGGGGGATA TERM 1031 601321 - 601307 - G 73 -3.5 -4.8667 | CATACGCCAGAAAAA CCGCT TGAAC AGCAG CCAGCTGATGGTAAA TERM 1032 601704 - 601663 - G 85 -16.5 -2.52464 | gap 1, opp_overlap 601688 CCTTTGTGTAATCCA CCGCCCCGCTGGCCACCGGT TCC ACCAG-GGCCGGCAGGTCGG CCGGGTCCATCTGGC TERM 1033 603767 - 603779 + G 72 -4.7 -4.63527 | opp_overlap 603767 603768, overlap 603768 GGCACCGGCTACAAA GGCCG GAC CGGCA TTTTTGAGCTGCTGC Dole_0536 602144 - 603961 + | type II secretion system protein E TERM 1034 604032 - 604006 - T 100 -13.8 -5.71712 | CTGGACACAAAAAAA GCGGGAACAG TGCCAAC CTGTTCCCGC TTGAAAAACAGAGTT Dole_0537 605236 - 604052 - | peptidoglycan-binding LysM TERM 1035 604168 - 604180 + g 80 -4.7 -5.02074 | TGCCGTATACGATGG GAGGC ATG GCCAC TTTTTTCCCACCTAC TERM 1036 605133 - 605119 - G 70 -4.2 -4.56597 | TCGTTTCCTGAAAAA CCGAAG TGT CCTCAG CCGGTGGTAAGGGGT TERM 1037 605496 - 605528 + r 100 -14.1 -4.13767 | opp_overlap 605515 TGACATGCTCCAGCG CCACCTCCCGGCTGA GAA TCAGCTGGGCCGTGG TTTTGAACTGGGCCG Dole_0538 606258 - 605473 - | glutamate racemase TERM 1038 605685 - 605695 + g 90 -6.8 -5.0538 | GCCTGCCGATCTTGT GACC AAT GGTC TTTTTTAAAATCGGA TERM 1039 605785 - 605797 + g 72 -4.7 -4.56597 | TTTTTTCACGATCAT GGCGG TTT CCGGC TTTTTCAGCCACCCC Dole_0539 606712 - 606242 - | hypothetical protein Dole_0540 607301 - 606702 - | recombination protein RecR TERM 1040 607218 - 607228 + g 77 -8.2 -4.37886 | overlap 607196 CAGGTGCATGGCCAG CCGC TCC GCGG TTTTCTGGCCGATGC Dole_0541 607612 - 607301 - | hypothetical protein TERM 1041 607469 - 607527 + g 86 -6.6 -5.01732 | gap 2, overlap 607479 CACCAGGGCCGTGAT CTGCTG--GCGGCCGTTGGCGGTGGCCT TGACC ATGCCGCCGCCGGCGGTGGCTTCAACGG TTTTTTCGGCCAGTT TERM 1042 607479 - 607515 + g 84 -15.8 -2.53392 | overlap 607469 GTGATCTGCTGGCGG CCGTTGGCGGTGGCCT TGACC ATGCCGCCGCCGGCGG TGGCTTCAACGGTTT Dole_0542 609377 - 607665 - | DNA polymerase III, subunits gamma and tau TERM 1043 607720 - 607739 + g 95 -6.4 -5.38054 | gap 1, opp_overlap 607715, overlap 607721 607723 TCGGCAACCAGCGGG TCC-GGACC CGC GGTCCTGGG TTTTTGTTTGTCCGG TERM 1044 607826 - 607836 + g 71 -6.8 -4.23054 | opp_overlap 607826 607824, overlap 607835 AAAAATCACAACACA CCTG TTT CAGG TTTTCCATGCTCTGT TERM 1045 608021 - 608053 + g 77 -7.6 -4.31433 | CGTTGTCCAGGGGTA CCGGGTCCGTGGTA CCGGT TGCGACCGGCCCGG TTTCTTCTGGCAGTG Dole_0543 610621 - 609896 - | methyltransferase small TERM 1046 610462 - 610509 + g 71 -12.6 -2.62184 | gap 1, opp_overlap 610462 GTATCAGGGGAATGA TGCCG-CACCCGGTGCCCAGGTC CAC GATGCGGGCGCCGGGTGCCGGGG TGATGTGCCAGGCAA Dole_0544 610878 - 610618 - | hypothetical protein TERM 1047 610778 - 610826 + g 74 -8 -4.11216 | overlap 610779 TTCTGTTTTATGGCC GCCGGCTGAGCGTTCTGGGCGG TCGGC CCGTCCACAACGGTTGGCCAGA TTTTGGAAATCAGCA TERM 1048 611979 - 611961 - g 72 -4.4 -4.65916 | GCGAGGCCAAGAAAA CCATCCTC GCC GCGGAGGG CTATGCGCTGGACCG Dole_0545 611105 - 612205 + | HflK protein TERM 1049 613018 - 612992 - g 70 -4.2 -4.614 | CTGAAGCATATAAAA CGGCCCAGACCA TTA TGGGAAAGGCCG ATGCCAGGGTCACGG Dole_0546 612202 - 613191 + | HflC protein TERM 1050 613312 - 613277 - f 100 -19.2 -4.8066 | gap 1, opp_overlap 613277 AACACAACGGAAAAA CGCCTTTGACACAACGC AAA GCGT-GCGTCAAAGGCG TTTTAATTGCCGTCA TERM 1051 613277 - 613312 + F 100 -17 -4.42238 | gap 1, opp_overlap 613277 AACACAACGGAAAAA CGCCTTTGACACAACGC AAA GCGT-GCGTCAAAGGCG TTTTAATTGCCGTCA TERM 1052 613610 - 613598 - g 70 -2.6 -4.82128 | overlap 613599 613601 CCATGAAACAGAAAA CGAG GCAGG CCCG GCAGGCCACACCCTG TERM 1053 613612 - 613625 + G 75 -3.8 -4.8622 | opp_overlap 613601 613599 ACGAGGCAGGCCCGG CAGG CCACAC CCTG TTTTTCCTTAGACCA TERM 1054 613768 - 613745 - g 72 -4.5 -4.68593 | gap 1, opp_overlap 613745 613753, overlap 613748 GCTACGATGTAAAAA CACGGGCCGG GCTTT CCGGCAC-TG AGATCGTGGAAGGCC Dole_0547 613585 - 614145 + | hypothetical protein TERM 1055 614143 - 614171 + F 75 -3.2 -5.05153 | opp_overlap 614148, overlap 614148 GCGCCTGTCGATTTG TGAAATAATCGG GCCTG CCGTTTATTTTG TTTGTTTTTTCACCT TERM 1056 614148 - 614166 + F 77 -3.1 -5.3472 | opp_overlap 614148, overlap 614143 TGTCGATTTGTGAAA TAATCGG GCCTG CCGTTTA TTTTGTTTGTTTTTT Dole_0548 614305 - 614571 + | FmdB family regulatory protein TERM 1057 614797 - 614785 - g 74 -6.2 -4.55798 | CACCGCAAAGGAAAA GCCC ATTGA GGGC AAGGTGATGGCGGTT Dole_0549 614684 - 614971 + | chaperonin Cpn10 TERM 1058 615265 - 615250 - g 74 -8.2 -4.25283 | overlap 615237 615234 615253 AGGTCGCCAGCAAAA CCAGCG ACAC CGCCGG TGACGGCACCACCAC TERM 1059 616453 - 616423 - g 78 -9.6 -4.0802 | opp_overlap 616445 616448 616450, overlap 616418 616442 616446 AGGTCAAGAACGAAA CCGGCAGCTTCGGT TAC AACGCAGCCACCGG CGACTATGGCGATCT Dole_0550 615009 - 616661 + | chaperonin GroEL TERM 1060 616727 - 616692 - T 100 -14.8 -5.06414 | opp_overlap 616698, overlap 616698 CCGCTTTAATAAAAA TAGAAAGCCCCCGTGA AACC TCACGGGGGCTTTTTT TATGAATACGAATTT TERM 1061 616721 - 616698 - T 100 -18.2 -4.64423 | opp_overlap 616698, overlap 616692 TAATAAAAATAGAAA GCCCCCGTGA AACC TCACGGGGGC TTTTTTTATGAATAC TERM 1062 616698 - 616721 + T 100 -18.2 -5.64274 | opp_overlap 616698 616692 TAATAAAAATAGAAA GCCCCCGTGA AACC TCACGGGGGC TTTTTTTATGAATAC Dole_0551 618085 - 616751 - | ammonium transporter TERM 1063 617823 - 617843 + g 86 -6.2 -4.87291 | gap 1, overlap 617823 CAGAAGACCAGGCTG CC-GATGGA AAAG TCCATCAGG TTTTTCATTAAAATA Dole_0552 618445 - 618107 - | nitrogen regulatory protein P-II TERM 1064 618379 - 618393 + g 75 -5.6 -4.68593 | overlap 618364 618362 TGCCGGTCACGCCGG CCTCGT TTA ACGCGG TTTTTACATCGTCCA TERM 1065 618425 - 618437 + g 82 -6.3 -4.84527 | overlap 618402 CCGAAACGGCTTGAT GATTG CCT CAATC TTTTTCATGTGTCGC TERM 1066 618628 - 618677 + H 74 -11.1 -2.75343 | opp_overlap 618628, overlap 618627 ATGATAAAAAAAATA GTATTACGAAAATGTATTGATGG CATT CTATTATTGCATTTTTGTAATAC GTTTCCGGGTGTCCA TERM 1067 618829 - 618819 - H 76 -8.2 -4.10958 | GGACAAAATATTAAA GGGG CAA CCCC CTTGGACCCTCGACC TERM 1068 619019 - 619036 + H 76 -8.3 -4.07568 | ATGTTTTGCGGCAAC CGGCAGG GAGG CCGGCCG TTTTGCACGGACAGA Dole_0553 619063 - 619743 + | FHA domain-containing protein Dole_0554 619843 - 620739 + | serine/threonine protein kinase TERM 1069 621246 - 621231 - g 73 -3.2 -4.78107 | GACCAGGAGGAAAAA CCGG TTCCCCCG CCGG TCTCCGACGCAGCAA TERM 1070 621285 - 621266 - g 77 -2.1 -5.1675 | opp_overlap 621280, overlap 621280 CGACGCAGCAAAAAA GCAGC TCATGAAAAC GCTGC TGGAGAGTGTACTTG TERM 1071 621827 - 621810 - g 84 -4.1 -5.27779 | CCCAAGATCAAAAAA GCCCT GTTGTCCG AGGGC ATGCCCGTTGCCGAG TERM 1072 621898 - 621876 - g 83 -12.1 -3.9122 | opp_overlap 621874 CATCTGGGCAAAGAA CTGGAAAGC GAGGG GCTTTCCAG GGTGCTTCAGGAAGC TERM 1073 622223 - 622236 + G 75 -5.2 -4.57569 | opp_overlap 622220 622223 GACCCGGATCAACGA CCGC ATTCAG GCGG TTTTTGACCGGCTGG TERM 1074 622499 - 622467 - g 73 -3.4 -4.78149 | gap 1, opp_overlap 622475, overlap 622476 GCGAGAAGGGAAAAA GAGTCAAAACGGCAG ATGC CCGCCGGTGT-ACTC AAGCCGGCCGAATTC TERM 1075 622491 - 622476 - g 77 -8.2 -4.37991 | opp_overlap 622475, overlap 622467 GAAAAAGAGTCAAAA CGGCAG ATGC CCGCCG GTGTACTCAAGCCGG TERM 1076 622767 - 622755 - g 72 -4.7 -4.58395 | overlap 622756 622757 CCCATGGCCGAAAAA GCCGG TGC CCGCC TGGCACTGCAGCGCA Dole_0555 620751 - 622967 + | hypothetical protein Dole_0556 624011 - 622974 - | nitroreductase TERM 1077 623310 - 623335 + g 88 -11.1 -4.25104 | gap 1 GGTATTGATGCCGCC CCGGGCACG-GG GCT CCACGTCCCCGG TTTTGATCCGGCAGA TERM 1078 623390 - 623407 + g 86 -3.3 -5.61596 | ACCAGTTGAGCTTTG CGTTTGG ATCG CCGGGCG TTTTTTTGTCCAGGT Dole_0557 624421 - 625314 + | TetR family transcriptional regulator TERM 1079 625410 - 625394 - f 81 -12.3 -3.01791 | opp_overlap 625393 ATTGCTGCTGGAACA TCACGCC AGC GGCGTGA CTCATTCCTCGGGAT TERM 1080 626050 - 626020 - g 81 -3 -5.22006 | CGAGGACAAGAAAAA GTCCTTTGCCGCCC TGG GCACGGCCGTGGAC ATTGAGCTGTTCAAG TERM 1081 626353 - 626372 + G 71 -10.6 -3.52475 | overlap 626353 626354 626359 GATGTGCTCACCCAT CGGCGACG GCGC CGCCGCCG TTATCGTCTGTTCAA TERM 1082 626418 - 626392 - g 84 -13 -3.63744 | gap 1, opp_overlap 626359 626384, overlap 626390 CGTCTGTTCAAAAGA GGCCGCGGCCC GGTTTG GGGCC-CGGCC GGTCTGGATCGCTTC TERM 1083 626849 - 626815 - g 87 -15.6 -3.37796 | overlap 626816 GGGCATGACCCACAA CGGCGGCGGCATTCTC GGC GTGGACGCCGCCGCCA TGGCCCTGCACGTGT TERM 1084 626848 - 626816 - g 85 -16.9 -2.62463 | overlap 626815 GGCATGACCCACAAC GGCGGCGGCATTCTC GGC GTGGACGCCGCCGCC ATGGCCCTGCACGTG Dole_0558 625652 - 626875 + | thiolase TERM 1085 627077 - 627059 - g 71 -8 -4.07885 | CAGCCGGTTTGAAAA GGCCGGCA TCA CGCCCGCC GACATTCGCAGTTTT TERM 1086 628261 - 628249 - g 83 -5.5 -4.99043 | overlap 628250 GGGCCACAAAGAAAA CCCAG CTC CTGGA AAAGGCTTACGAGGA Dole_0559 626913 - 628280 + | phenylacetate--CoA ligase TERM 1087 629417 - 629407 - g 74 -8.2 -4.2349 | CCTGGATATTCAAAA GCGG CCC CCGC ACCCGGCCCACCATG Dole_0560 628425 - 630194 + | NAD-dependent epimerase/dehydratase Dole_0561 630197 - 631093 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1088 631411 - 631392 - f 73 -7 -4.18494 | TATTTTGATTCAAAA GCGCGGGC CACC GTCCGCAC CGAGATTGCATTTCA TERM 1089 631594 - 631575 - g 80 -2 -5.24129 | opp_overlap 631577, overlap 631577 GCGTTTTACAAAAAA GAGGAGGC CCAG GCCTGCTT TATCAACCTGCCCCG Dole_0562 631443 - 631751 + | hypothetical protein TERM 1090 631934 - 631960 + T 100 -14.4 -6.04378 | opp_overlap 631931, overlap 631935 TTTCGATTAAAGCGG ACAGGGGCGCAG AAC TTGCGCCCCTGA TTTTTTTTATAATTT TERM 1091 631935 - 631959 + T 100 -17.9 -4.18967 | opp_overlap 631931, overlap 631934 TTCGATTAAAGCGGA CAGGGGCGCAG AAC TTGCGCCCCTG ATTTTTTTTATAATT Dole_0563 632518 - 631985 - | membrane protein of unknown function (DUF1430) TERM 1092 632677 - 632644 - R 100 -19.5 -5.3104 | opp_overlap 632640 GGAGGAAAAAGAAAA CCCCGGGGTCGGGCA GGGT TGTCCGGCCCCGGGG CGAATGGATTGAATG Dole_0564 633049 - 632711 - | nitrogen regulatory protein P-II TERM 1093 632986 - 632996 + g 78 -3.2 -5.1101 | CCTGAATGCCCAGTT CGTT TAA GACG TTTTTTACATCATCA Dole_0565 634375 - 633089 - | ammonium transporter TERM 1094 633463 - 633428 - G 75 -12.4 -3.30124 | GGCCACGCTGTAGAA TCCCAGGACCCCGGCC ACCA GGCCGATGACCAGGGA GGCGGGCAGGTTGAC TERM 1095 633533 - 633482 - G 83 -12.1 -3.87815 | overlap 633532 GGGCAGGTTGACAAA CCCGGCCGCCGGGGTGATGGCCA CCAGCC CGGCCACCACGCCCGAGGCAAGG CCCAGCAGGGTGGGC TERM 1096 633635 - 633623 - G 80 -10.5 -3.96148 | GTTGGTGACCAGAAA GGCCG AGC CGGCC AGGCCGTTGGCGCCC Dole_0566 635680 - 634397 - | ammonium transporter TERM 1097 634799 - 634777 - G 75 -10.4 -3.76402 | overlap 634760 634778 AGGCCATGGACGAAA GGGCGCCCAG GAC CAGGGCGCCG CCGGGCAGCACCACG TERM 1098 634798 - 634778 - G 76 -13.9 -2.8552 | overlap 634760 634777 GGCCATGGACGAAAG GGCGCCCAG GAC CAGGGCGCC GCCGGGCAGCACCAC TERM 1099 635437 - 635414 - G 71 -8.2 -3.9461 | gap 1 GCCCTTCAACAAGAA GTAGTC-GCTG TTC CAGCCGACCAC ACCGCCCATCACGCT TERM 1100 635793 - 635806 + r 73 -9.5 -3.32647 | GCCGTCTGTGAAGGG GCGGG ATTA CCCGC TTCATGTCGTTCCAG Dole_0567 638431 - 635768 - | UTP-GlnB uridylyltransferase, GlnD TERM 1101 636241 - 636251 + g 70 -2.4 -4.72846 | opp_overlap 636235 CGGTAAACACGTCCA GGGC GAT GCCG TTTTTCCATGTGTAG TERM 1102 636865 - 636833 - G 75 -9.1 -3.96148 | gap 1 TTCTTTCACCAGAAA GGCCACGGCCCCGG TAAACT CCGGG-CCGTATCC CATTCCCGACAGAAT TERM 1103 637412 - 637446 + g 78 -6.3 -4.56597 | CAGGTTCCGGTCGAC CTCGATGCCCGGC-GCC ACC GGCTGCCGGACC-CGGG TTTTTCGCGCGAACC TERM 1104 638120 - 638146 + g 86 -6.5 -5.00616 | gap 1 GACCATTTCCCGGAT CAGG-GCCTCAG CCGC CGGGGGCACCTG TTTTTTGAACAGAAA TERM 1105 638711 - 638731 + r 81 -8.1 -4.56597 | GTTGAAACTCCCGGT GCTCCCGGC TCG GCCGGCCGC TTTTTAACACGAAGC Dole_0568 639551 - 638772 - | NAD+ synthetase Dole_0569 640871 - 640569 - | hypothetical protein Dole_0570 641386 - 640970 - | hypothetical protein Dole_0571 641490 - 642101 + | HAD family hydrolase Dole_0572 642120 - 643499 + | PAS modulated sigma54 specific transcriptional regulator TERM 1106 644194 - 644174 - g 76 -12.5 -3.11118 | overlap 644172 644163 AGAAGCGATCGAACA GGGCCCCAG GGT CTGGGGCCG GGAACCGGTCGGGGC Dole_0573 643826 - 644344 + | hypothetical protein TERM 1107 644460 - 644436 - f 70 -10 -3.15579 | overlap 644439 GCAAGTTCCGAGGAA TGAGGCGTAC TTGCT GTACGCCGCA GTGACGAGTGAATGC TERM 1108 644457 - 644439 - f 71 -10.3 -2.78018 | overlap 644436 AGTTCCGAGGAATGA GGCGTAC TTGCT GTACGCC GCAGTGACGAGTGAA TERM 1109 644571 - 644543 - g 77 -12.3 -3.55219 | overlap 644550 AATGCCAGGATACAA TGGAACAGGCCCC ATG GGGGCCGGGCCCA TGACGGGCGGTGCGC TERM 1110 644564 - 644550 - g 79 -12.8 -3.19511 | overlap 644543 GGATACAATGGAACA GGCCCC ATG GGGGCC GGGCCCATGACGGGC Dole_0574 644529 - 644849 + | hypothetical protein TERM 1111 644994 - 644950 - f 76 -7 -4.34008 | gap 1, opp_overlap 644955 644955 GATCAAGGAAAACAA GGGCTGACGCG-GAGGCGTAC TGTT GTACGCCGCACAAGGAAGCCC GCAGTTTGACGCAGA TERM 1112 645090 - 645137 + F 93 -14 -3.57651 | overlap 645091 TTCATGCCCTCCTCC AACCCTGCCCGATCCCCGTTCA ATCG TGAACGGGGGCCGGGTCGGGCC TTGTATGATGTCCCA TERM 1113 645091 - 645136 + F 100 -17.5 -2.74269 | overlap 645090 TCATGCCCTCCTCCA ACCCTGCCCGATCCCCGTTCA ATCG TGAACGGGGGCCGGGTCGGGC CTTGTATGATGTCCC TERM 1114 645284 - 645301 + G 71 -6.9 -4.14243 | overlap 645283 TACAGCGATGTCCGC CGCGCTG GAGG CAGCGGG TTTTGCGGTCAAATG Dole_0575 645231 - 645629 + | response regulator receiver protein TERM 1115 645763 - 645807 + G 71 -12.2 -3.01712 | gap 2, opp_overlap 645763 CCACCTGTTTTTAAA GCCGGC-CT-TCACCGACATGG AGG CCGTGATGGTGATGGTGCCGGC TGTTGACGAAGAAAA TERM 1116 645845 - 645824 - g 78 -2.9 -5.1356 | overlap 645825 GTTGACGAAGAAAAA TGCACCTAC TGCC GCAAGTGCG CCGAGATATGCCGGT Dole_0576 645626 - 646480 + | cobyrinic acid ac-diamide synthase Dole_0577 646477 - 647352 + | cobyrinic acid ac-diamide synthase TERM 1117 647365 - 647385 + F 70 -9.6 -3.25942 | opp_overlap 647356 TAACAATGTGCGGGA CGGGCCGC ATGGG GCGGCCGG TTCCTGTAGAGCGCT Dole_0578 647434 - 647817 + | dinitrogenase iron-molybdenum cofactor biosynthesis protein TERM 1118 647850 - 647868 + F 72 -10.2 -3.06696 | GGGCGAGTCGCTTTG ATCCCGCC ATC GGCGGGAC TGTGTTGCGGGCCGC TERM 1119 647897 - 647954 + F 81 -12.6 -2.50074 | opp_overlap 647896, overlap 647902 GCTCGCAATATATAC GGTAGGGGCGAACCTTGTGTTCGCCC TTTGAT GGGCAACCACAGGGAGTGCCCCTACA ATATATTGTCCCGCG TERM 1120 647902 - 647922 + F 90 -12.6 -3.72576 | opp_overlap 647896, overlap 647897 CAATATATACGGTAG GGGCGAAC CTTGT GTTCGCCC TTTGATGGGCAACCA Dole_0579 648076 - 648825 + | beta-lactamase domain-containing protein Dole_0580 648853 - 649197 + | hypothetical protein Dole_0581 649212 - 649682 + | dinitrogenase iron-molybdenum cofactor biosynthesis protein TERM 1121 649744 - 649800 + F 77 -10.3 -3.56762 | gap 1, opp_overlap 649758, overlap 649704 649703 649745 649750 GCCTCTGGCGACGGC GGAAGCGCAGCGAAGCAATCTTGTCC AGACGC GGAGGAGATTGCTTCGTCGC-CTTGC TTCTCGATTTTTCAT TERM 1122 649750 - 649795 + F 84 -13.4 -2.68361 | opp_overlap 649758, overlap 649704 649703 649744 649745 GGCGACGGCGGAAGC GCAGCGAAGCAATCTTGTCC AGACGC GGAGGAGATTGCTTCGTCGC CTTGCTTCTCGATTT TERM 1123 650385 - 650359 - g 78 -2.9 -5.055 | overlap 650361 GGAATCCTGAAAAAA CCCTGGCCG CTGTCCGGT CGGCCAACG AGATCCCGTTTTCAG Dole_0582 649872 - 651311 + | hypothetical protein TERM 1124 651329 - 651309 - f 79 -9.8 -3.91798 | overlap 651297 CAACCGCCAATCAAA TGACGGAA GATGG TTCCGTCA CGGAAAGGTCTTGCA TERM 1125 651754 - 651720 - g 70 -3.6 -4.67109 | opp_overlap 651725 GAAAATAAAAAAAGA GCCTGTACCG-CCCGG TATTT CCGAATCAG-ACAGGC TTTTGAGGTAAACGG Dole_0583 651346 - 651765 + | hypothetical protein Dole_0584 651871 - 652713 + | hypothetical protein TERM 1126 652783 - 652761 - g 85 -10.5 -4.39426 | TAGACCTTCACAAAA GCGCGGACC GGCAG GGTCCGGGC GGGGATGCAGAGACC TERM 1127 653121 - 653093 - g 72 -4.6 -4.56775 | gap 2, opp_overlap 653100 653101 653120, overlap 653101 ATCGGGTTTGAAAAA GGC-G-TAAAGGCG TGG CGCCGTTATCTGCC GGTAGGCGGCCTGCT TERM 1128 653375 - 653365 - g 70 -2.4 -4.84359 | overlap 653373 TGACCGGCACAAAAA CAGC AAA GCGG CACAGGCGGTCGTGG Dole_0585 652724 - 653485 + | methyltransferase type 11 Dole_0586 655706 - 653589 - | CoA-binding domain-containing protein TERM 1129 654251 - 654205 - G 95 -11.5 -4.78149 | TCCACAAGGTAAAAA CCGGCCTGGCGGCAGC-AGGCCT TGA AGGCCTCGTGGCTGCC-GGCCAG AGAAGCGGTATGGGA TERM 1130 654289 - 654317 + g 93 -5.8 -5.40072 | opp_overlap 654256, overlap 654269 654315 GCCGCGGCCCCGCCC CCGGTGCCGCCC TTGAT GACCAGCACCGG TTTTTTTGCCGAAAC TERM 1131 654829 - 654815 - G 70 -4.2 -4.62069 | overlap 654816 CGTTGACGGCAAAAA CCCC CAGGTCC GGGG CTTCGGGCAGGGCGT TERM 1132 654989 - 655009 + g 78 -4 -4.9251 | overlap 654991 TGGCAACGGACCGGG GGCTGAAA ACGGC TTTCAGGC TTTTCATTTTTTCTT Dole_0587 657517 - 655802 - | transglutaminase domain-containing protein TERM 1133 655997 - 655978 - G 79 -12.8 -3.27525 | CGCCGGTAAATCCAA GGGCCGCC CAGT AGCGGCCC GGCTGCAGCACGATC TERM 1134 656576 - 656627 + g 85 -10.3 -4.26019 | gap 3, opp_overlap 656580 AATATCTTCCCGGAA CGAAGGCTTG--CCGGTGGAACCC TTTACCC GGG-TCCACCGGATCAGGCCGTCG TTTTCCGTGTCGTTG TERM 1135 656758 - 656768 + g 70 -2.4 -4.77036 | CGATCCAGGAGTGGC GGCC TTC GGCG TTTTTCATGATCAGC TERM 1136 657118 - 657095 - G 71 -13.2 -2.52464 | gap 1, opp_overlap 657116 GGTGGCGGCAAGGTA GGGCTTCACCG CGT CGG-GAAGCCC GGCCACCGGGAACGG TERM 1137 657155 - 657167 + g 72 -4.8 -4.66833 | overlap 657150 GGTCTTCAGCGTGTC CAGC CGGAC GCTG TTTTTCACGTTAAAG Dole_0588 658968 - 657664 - | hypothetical protein TERM 1138 658039 - 658055 + g 79 -5.8 -4.77165 | gap 1 GTTGGAGATGGAGCC CCGCACG CACC CG-GCGG TTTTCTTCTCCAGGG TERM 1139 658412 - 658425 + g 75 -9.5 -3.8709 | CCGTCTTTTTCCGCG GCGGC CCGG GCCGC TTTCTCAAACCCTTT TERM 1140 659966 - 659954 - g 80 -10.5 -4.07885 | CATTGCCGCGCAAAA GGGGC TGG GCCCC ATCGACATGGCCGAC TERM 1141 660008 - 660035 + G 75 -9.2 -3.86015 | gap 1, opp_overlap 659995 659993 660025, overlap 660006 659993 CACGCCCATCGTGCC GGTGGCCGG-GTT TAA AATGCCGGTCACC TTTCTGCCCGGCATC TERM 1142 660048 - 660025 - g 71 -8.1 -4.07568 | opp_overlap 660008 TGGCCGGGTTTAAAA TGCCGGTCA CCTTTC TGCCCGGCA TCATGGGCGTGGTGC Dole_0589 659151 - 660308 + | hypothetical protein TERM 1143 660389 - 660404 + G 77 -11.8 -3.53012 | opp_overlap 660379 CACCATCGGCATTGC GGCCCC GGCC GGGGCC TTTGACGCCGACCGG TERM 1144 660611 - 660566 - g 76 -7.3 -4.42806 | CGACCCGGAAATAAA GGCCGTGGCCTGCGCCCGG GGCGGGTT CGGGGCGCTGCGCATGGCC CCCCTGCTGGACATG TERM 1145 660855 - 660887 + G 87 -15.5 -3.30441 | overlap 660858 GTGCCGGGCACAGCC CAGGGCCCGGTTGCC GGC GGCAACCTGGCCTCG TTGTGCCAGATGATC TERM 1146 660858 - 660884 + G 89 -18 -2.8294 | overlap 660855 CCGGGCACAGCCCAG GGCCCGGTTGCC GGC GGCAACCTGGCC TCGTTGTGCCAGATG TERM 1147 661002 - 661046 + G 83 -13.3 -3.55444 | CTGACCCAGATGCGG CTGGCCGGGTGCCTTGCGGGC GTT GCCGGCGTGGCCCTGGGCCGG TTTGACCGGTGCGGG TERM 1148 661224 - 661199 - g 82 -13.3 -3.31144 | CCTGGACGCGGAGAA CCGGTTCCTGG AATA CCACGAACCGG CCCTGGCACGATAGG Dole_0590 660321 - 661238 + | peptidase U61 LD-carboxypeptidase A TERM 1149 662655 - 662666 + G 70 -2.2 -4.78237 | gap 1, opp_overlap 662655, overlap 662644 662650 TATTCCGGGGCAAAA C-CCG GCC CGGTG TTTTCTTCTGCCATG TERM 1150 662758 - 662769 + G 74 -2.2 -5.00616 | gap 1, opp_overlap 662754, overlap 662755 ACCCGGAAAATTCCA GCGCG GGC CG-GC TTTTTTCCGCCCGGG Dole_0591 661863 - 662945 + | beta-lactamase Dole_0592 663102 - 664145 + | cell shape determining protein MreB Dole_0593 664193 - 665026 + | rod shape-determining protein MreC TERM 1151 665280 - 665302 + G 72 -4.6 -4.56597 | ATCTCTGGATTGTCG CCGGCGTGCG CAT CTCCCTCCGG TTTTTCCACGGCGAA Dole_0594 665039 - 665542 + | hypothetical protein Dole_0595 665691 - 667595 + | peptidoglycan glycosyltransferase TERM 1152 668425 - 668437 + G 81 -9.1 -4.29493 | GGGCCTGGTGGGGGT CAGCG TGG CGCTG TTTCTGTATTTGCTG TERM 1153 668508 - 668534 + G 77 -8 -4.37886 | opp_overlap 668491, overlap 668511 ATAATTTTGGTATTA TCCTGGCGGT CGGCGTC ACCGCCATGA TTTTCTGGCACGTGG Dole_0596 667592 - 668698 + | rod shape-determining protein RodA Dole_0597 668796 - 669161 + | hypothetical protein Dole_0598 669338 - 669856 + | H+transporting two-sector ATPase B/B' subunit TERM 1154 670157 - 670147 - g 70 -4.6 -4.48221 | overlap 670139 GAGGAAGCCAGAAAA GCCC TGG AGGC CTATAACGAGCGTCT Dole_0599 669853 - 670455 + | H+transporting two-sector ATPase B/B' subunit Dole_0600 670455 - 671006 + | F0F1 ATP synthase subunit delta Dole_0601 671006 - 672523 + | F0F1 ATP synthase subunit alpha TERM 1155 673246 - 673262 + G 81 -3.7 -5.11112 | TGAAATTCTTGACGC CATGCTT CCC AAGAATG TTTTTATTCAGATTT Dole_0602 672566 - 673462 + | ATP synthase F1, gamma subunit Dole_0603 673501 - 674904 + | F0F1 ATP synthase subunit beta TERM 1156 674990 - 674971 - g 76 -2.8 -5.02074 | gap 1, overlap 674973 TTACCCCGGAAAAAA CG-GTGGTC AGC GACGACGCG CAGATCGTCATGGCA Dole_0604 674928 - 675329 + | ATP synthase F1, epsilon subunit TERM 1157 675397 - 675373 - f 76 -7.1 -4.41237 | opp_overlap 675373, overlap 675364 ATTAAAGAATACAAA GGGCATTCC GTTTTCT GGCATGCCC TTTTGTTTTTGCCGG TERM 1158 675373 - 675397 + F 93 -7.8 -5.26119 | opp_overlap 675364 675373 ATTAAAGAATACAAA GGGCATTCCG TTTTC TGGCATGCCC TTTTGTTTTTGCCGG Dole_0605 675400 - 676245 + | nucleotidyl transferase Dole_0606 676293 - 676568 + | hypothetical protein Dole_0607 676602 - 676892 + | hypothetical protein TERM 1159 677235 - 677267 + F 93 -13.4 -3.68859 | gap 2, overlap 677240 TTGACGTTTACAGGT GCCCCGGC--GCCGGC AGA GCCGGCCTGCCGGTGC CTTTTTTACCTTAAA TERM 1160 677240 - 677268 + F 100 -15.3 -5.15969 | overlap 677235 GTTTACAGGTGCCCC GGCGCCGGCAG AGCCGGC CTGCCGGTGCC TTTTTTACCTTAAAC Dole_0608 677324 - 678886 + | RNA binding metal dependent phosphohydrolase TERM 1161 679826 - 679812 - g 70 -4.2 -4.66953 | CCAAGATGGGAAAAA CCGC TGCCGGC GCGG TCTGGCTGGATGCTG Dole_0609 679115 - 680416 + | tyrosyl-tRNA synthetase TERM 1162 680448 - 680458 + F 83 -8.2 -4.57073 | overlap 680425 GCGTTGTGGCGCATG CCGG CTG CCGG TTTTTGGAGACGATG TERM 1163 680904 - 680879 - f 71 -8.9 -3.60214 | opp_overlap 680880, overlap 680880 ACCCTAATTACACAA TCGCTTCTGGC TTAT GCCAGAGGCGT TTTAAGTTTAATTGG TERM 1164 680880 - 680903 + F 100 -14.6 -4.39318 | opp_overlap 680879 680880 CCCTAATTACACAAT CGCTTCTGGC TTAT GCCAGAGGCG TTTTAAGTTTAATTG TERM 1165 680903 - 680880 - f 80 -12.4 -2.75647 | opp_overlap 680880, overlap 680879 CCCTAATTACACAAT CGCTTCTGGC TTAT GCCAGAGGCG TTTTAAGTTTAATTG TERM 1166 681003 - 680986 - f 76 -8.5 -3.96892 | AAGTCGTACGAGAAA GTTTCAG CTTG CTGAAAC AAGTAAAGTGGCGCA TERM 1167 681558 - 681540 - f 71 -10.2 -2.7814 | overlap 681539 AGTCAGATGTGAAAG CCCGGGGC TCA ACCCCGGA AGTACATTTGAAACT TERM 1168 683018 - 683034 + F 74 -4.4 -4.86939 | opp_overlap 683018, overlap 683011 AAGCGGTACGACAAG CAGTTC AATAA GAGCTG TTTTTCGATTTGTTC TERM 1169 684502 - 684486 - f 70 -8 -3.93963 | ATGAGTAGCGATAAA GCAGGT GAAAA ACCTGC TCGCCGGAAGCCTAA TERM 1170 686358 - 686329 - f 93 -15 -3.33009 | opp_overlap 686329 GAAAATTTTTTATAA GCCCGGTGTCAG GTTTTT CTGGCACCGGGC TTTTTTTGTTTTCCA TERM 1171 686329 - 686358 + F 100 -17.9 -6.09196 | opp_overlap 686329 GAAAATTTTTTATAA GCCCGGTGTCAGG TTTT TCTGGCACCGGGC TTTTTTTGTTTTCCA TERM 1172 686655 - 686667 + G 86 -9.1 -4.66833 | TGACCAGAACGATCC GGCCT ACA AGGCC TTTTTGGAGTTCCGG TERM 1173 687959 - 687984 + G 70 -3.9 -4.57341 | gap 1, overlap 687961 TGTTTGATTCCGGAA CTCCGGA-CGGT GTG ACGGATCCGGCG TTTTTGAAACGGATT TERM 1174 688677 - 688687 + G 71 -8.2 -3.97307 | overlap 688650 CGCCATGCTGGGGGT GGGC CGG GCCC TTCTTGTTACATCGG Dole_0610 686449 - 688872 + | exporter of the RND superfamily protein-like protein TERM 1175 689158 - 689170 + F 77 -4.8 -4.87133 | GACCTTTTGATTTGA CCGT CTCTT ACGG TTTTGTTTCGCGGAT TERM 1176 689264 - 689276 + F 100 -7.7 -5.77571 | opp_overlap 689258, overlap 689259 GATACATCAGGTCTC TGGTC AGC GACCA TTTTTATTTTTTGAT TERM 1177 689314 - 689344 + F 100 -21.2 -5.72622 | opp_overlap 689314 ATTTTGTGGTTTAAA GGGGGGAAGGCCCG GGG CGGGCTTTCCTCCC TTTTTTGTTTCTGAC TERM 1178 689344 - 689314 - f 100 -16.8 -3.53091 | opp_overlap 689314 ATTTTGTGGTTTAAA GGGGGGAAGGCCCG GGG CGGGCTTTCCTCCC TTTTTTGTTTCTGAC TERM 1179 689966 - 690000 + G 73 -12.7 -2.7185 | GCCCGGGACCGGCTG ACGGCCACGGCGGCC GAGGA GGCCGCGGTGGGCGG TCATTACGAACTGGT TERM 1180 690659 - 690649 - g 77 -2.4 -5.08824 | opp_overlap 690657 CCTGGAGGGAAAAAA GGAG GGG CACC GGTCCGGACTCTTTA Dole_0611 689453 - 690847 + | TolC family type I secretion outer membrane protein TERM 1181 690882 - 690863 - f 80 -9.3 -4.23054 | overlap 690856 ACAGACGACTTAAAA GGAGACC TTTTGG GGTCTCC GGGGATGGACGCAAT TERM 1182 691212 - 691178 - g 80 -4.8 -4.93318 | overlap 691181 GACAATGGAGAAAAA GAAGGGCCCGCCGCTC CGG AAAAGCCGGACCCGTC GCATGCCCTTACCGC TERM 1183 691209 - 691181 - g 70 -5.1 -4.55383 | overlap 691178 AATGGAGAAAAAGAA GGGCCCGCCGCTC CGG AAAAGCCGGACCC GTCGCATGCCCTTAC TERM 1184 691427 - 691446 + G 85 -15 -3.10343 | opp_overlap 691405, overlap 691439 GGCAACGCGGACCTG CCGGCGGA TACG TCCGCCGG TTCCCTGCTGGATAT TERM 1185 692249 - 692273 + G 78 -7.7 -4.44355 | opp_overlap 692248, overlap 692251 692251 CCTGTTGACGAAGAT GCGCCGGACCG TAC CGGTCTGGACC TTGTTTTTACCGTTC TERM 1186 693674 - 693658 - g 79 -13.7 -3.14132 | GCTGGCCGCCATCAA TGCCGCC GGC GGCGGCA AGCTCTCCGCCGAAG TERM 1187 694448 - 694426 - g 89 -16.2 -3.22774 | opp_overlap 694420 694430 TACAGGCATCAGCAA CGCCGCCGGC GGC GCCGGCGCCG ACCTGCTTATCGGCA TERM 1188 697157 - 697167 + G 80 -2.4 -5.26119 | opp_overlap 697145, overlap 697150 AACGCCGCCGGCGCC ACGG TGA CCGA TTTTGTTTTTGACGC TERM 1189 699164 - 699174 + G 70 -4 -4.56597 | overlap 699150 TCCGTTGATGACTGG TCAA CGG TTGA TTTTTCGGACGAAGC TERM 1190 700338 - 700374 + G 72 -4.9 -4.65895 | opp_overlap 700338, overlap 700350 CAGTGGCGGGCAACA CCGCGGTCAGCGCCGTC AAT GACGGTTTTATCGGCGG TTTTTCCGTGGCCGG TERM 1191 700350 - 700362 + G 81 -9.1 -4.39002 | opp_overlap 700338, overlap 700338 ACACCGCGGTCAGCG CCGTC AAT GACGG TTTTATCGGCGGTTT TERM 1192 700471 - 700415 - g 75 -9.2 -3.87641 | gap 1, opp_overlap 700461 AAGAGTTCCCAGAAA GCACCGGGCAGCGGCGGTGGCACCAGC TCCA ACCGGGGC-ACCGGCGGCACCCAGGGC TCTGATGGCAGCGTG TERM 1193 700811 - 700831 + G 83 -13.9 -3.61654 | overlap 700824 AGCGGCACCGGTTCC GGCACCGCC GTG GGCGGCGCC TTTGGCGTCAATGTG TERM 1194 701411 - 701359 - g 75 -5.6 -4.58283 | CAATTTTTTGAAAAA CACCC-TGGAAGCGAAGATTGTCGAC ACG ATCGTCA-CCGCCGCTTCCACAGGCG ACATTAGCGTTGACG TERM 1195 701939 - 701976 + G 72 -4.7 -4.56775 | gap 1, overlap 701943 GTCAGTGTTACCTTG GGCGGCGCCGGGGGCGAG AAG TTCGCCCTGGGTGG-GTC TTTTTCCGCCAACGT TERM 1196 702213 - 702260 + G 78 -11.3 -3.66803 | opp_overlap 702216 CATCCACCGGTGGAA GCATCGGCCTGGC-CGCCGGC ATCGCGCC GCCGGCCAGCAAGGCCGA-GC TTTCCGATGTTCGCA TERM 1197 702258 - 702216 - g 83 -15.6 -2.71364 | gap 1, opp_overlap 702213 CCACCGGTGGAAGCA TCGGCCTGGCC-GCCGGCA TCGCGC CGCCGGCCAGCAAGGCCGA GCTTTCCGATGTTCG TERM 1198 702345 - 702369 + G 71 -7.1 -4.24404 | gap 1 TGACCGTGGCCGGGG CCGG-GGCCG GAAAAG TGGCCGCCGG TTTTGCCCTTTCCGT TERM 1199 704653 - 704669 + G 70 -2.1 -4.83169 | overlap 704656 TGTCGAATCCACCGT CGACGCT GAT GGCGATG TTTTTCTGGCCGCAT TERM 1200 705208 - 705230 + G 71 -11.2 -3.2794 | TTGCGCGGATATCGA CGCCTCCACG GTC CGTGCGGGCG TTGATATCAATGACG TERM 1201 705575 - 705543 - g 75 -12 -3.29593 | gap 1, overlap 705541 ACGTGATAACCAACA CCACGGTGG-CCCAG ATCG CCGGTTCCACCGTGG AAGCCGGCGGCAACG TERM 1202 705775 - 705754 - g 77 -10.1 -3.86346 | GGACGGCTCGATAAA TGAAGGCGC GTCC GCGCCGTCA ACGGTCACCGCCGAT TERM 1203 706569 - 706519 - g 74 -8.1 -4.18018 | gap 2, opp_overlap 706556, overlap 706495 GTCTGTCATTCAAAA CGG--CGCCACGGTAACGGCCGGCG GTG CACTGGCCCTGGCCGCGGCGGACCG TTCCGCCATCGGCTC TERM 1204 706933 - 706948 + G 70 -11.8 -2.71924 | overlap 706932 GGCGTCGGGTTTTGG CGCGGC CGGG GCCGCG GTTTCCAAGAACCTG TERM 1205 707710 - 707731 + G 74 -8 -4.1711 | opp_overlap 707709, overlap 707730 CGTGGTCACCAACAC GGTGGACA ATGATG TGTCCGCC TTTATTCAAGGTACT TERM 1206 711190 - 711203 + G 81 -3.7 -5.06414 | overlap 711175 711189 GGATGCCTCCCAGCG GGGCG GCGG CACCC TTTTTATTAACGACA TERM 1207 715292 - 715282 - g 77 -8.2 -4.33165 | GGAAATGGACGAAAA CCGG GTG CCGG TGGAAAACGGCGTGG TERM 1208 716574 - 716612 + G 83 -13.3 -3.34398 | gap 1, overlap 716573 TTGATAATGACGCGC CCGGTGTGGTCATTGCCC AGCA GGGCAATGAC-ACAGTGG TGTTTGAAAAAGAAG TERM 1209 721797 - 721818 + G 81 -12.3 -3.73647 | gap 1, overlap 721800 ACTGGCCCGGCGGCG TGG-CCCCGG CAG CCGGGGTCCA TTATTACTACATGCC TERM 1210 721800 - 721814 + G 71 -12.8 -2.67428 | overlap 721797 GGCCCGGCGGCGTGG CCCCGG CAG CCGGGG TCCATTATTACTACA TERM 1211 722310 - 722277 - g 80 -14.6 -2.82015 | TTTATATCGACGACA GCCAGGATGCCAGC GACAAT GCCGGCACCCTGAC CCAGACCACCCTGAC TERM 1212 725035 - 724997 - g 71 -12.4 -2.91582 | GAGTCCACCGAGATA TCCACCGGCGGAGACGAT CAG ATCACCACCGGCGATGGA GACAAGCACATTTTC TERM 1213 725803 - 725765 - g 71 -12.4 -2.91582 | GAGTCCACCGAGATA TCCACCGGCGGAGACGAT GTG ATCACCACCGGCGATGGA GACAAGCACATTTTC TERM 1214 726187 - 726149 - g 71 -12.4 -2.91582 | GAGTCCACCGAGATA TCCACCGGCGGAGACGAT CAG ATCACCACCGGCGATGGA GACAAGCACATTTTC TERM 1215 726571 - 726533 - g 71 -12.4 -2.91582 | GAGTCCACCGAGATA TCCACCGGCGGAGACGAT GTG ATCACCACCGGCGATGGA GACAAGCACATTTTC TERM 1216 726955 - 726917 - g 71 -12.4 -2.91582 | GAGTCCACCGAGATA TCCACCGGCGGAGACGAT GTG ATCACCACCGGCGATGGA GACAAGCACATTTTC TERM 1217 727339 - 727301 - g 71 -12.4 -2.91264 | opp_overlap 727284 GTGTCCACCGAGATA TCCACCGGCGGAGACGAT GTG ATCACCACCGGCGATGGA GACAAGCACATTTTC Dole_0612 690896 - 729121 + | hemolysin-type calcium-binding region TERM 1218 730012 - 729977 - g 81 -11.9 -3.72576 | gap 1, overlap 729999 CGGCGTCTTATGAAA TCGTCCGCGGCATCGT TCAAC ACGCCGCCG-GGACGA TGGCACCCGAGGACT Dole_0613 729175 - 730302 + | hypothetical protein TERM 1219 730592 - 730566 - g 71 -10 -3.53855 | opp_overlap 730591, overlap 730564 730580 TGGTTCAAAAAGATA CAGGTGCAGACC AAC GGCCGGCGCCTG GCCGACAGGGCATAT TERM 1220 731146 - 731178 + G 70 -2.6 -4.8048 | gap 1, opp_overlap 731172, overlap 731147 GCCTTTCGGATGCCT ACCGGTCCCGGTTCG GAGA CGAACAAG-ACCGGC TTTTTCCTCTGGCCG Dole_0614 730299 - 731225 + | radical SAM domain-containing protein Dole_0615 731215 - 732078 + | hypothetical protein TERM 1221 732390 - 732411 + G 71 -7.2 -4.13282 | overlap 732375 732364 TCATGGCCCGCATGG CGGCCCAG GATCTG CTGGGCGG TTTTGCCGATCTGGT TERM 1222 732434 - 732459 + G 91 -12.5 -4.09511 | overlap 732429 GATCTGGTGACGGAC CGGGCCCGTTT TATG GACCGGGCCCG TTTTCACCGGCTGTT Dole_0616 732065 - 733105 + | O-methyltransferase family protein TERM 1223 733185 - 733228 + F 81 -3.6 -5.4505 | opp_overlap 733171 733160 AGGTTTCCGTTGACA CCCCCTGCCGGATGCGGTAT GTAG ACAACACAGCAGGCAGGTGG TTTTTTCTTACGACA Dole_0617 733267 - 733620 + | hypothetical protein TERM 1224 733650 - 733676 + F 100 -13.1 -4.56597 | gap 1, overlap 733652 TTTTTACCGCTGTGC CA-CATGGGGCG TTAT CGCCCCATGCTG TTTTTCCGGCAGCCA TERM 1225 733652 - 733673 + F 100 -15.9 -2.93708 | overlap 733650 TTTACCGCTGTGCCA CATGGGGCG TTAT CGCCCCATG CTGTTTTTCCGGCAG TERM 1226 734841 - 734798 - g 88 -11.1 -4.13767 | opp_overlap 734816, overlap 734801 734831 TGGCCTATGTTAAAA GCATTGCCGCGCTTTCC-GGG CCGG CCCTGGAAAGC-CGGCACCAC CAGGACCGGCCTGTG TERM 1227 734867 - 734831 - g 74 -10.9 -3.53012 | opp_overlap 734816 734862 734863, overlap 734801 734798 GGCCGGCCCTGGAAA GCCGGCACCACCA GGACCGGCCTG TGGTGGTGCTGGC CTTCCAGGCCCTGAA Dole_0618 733876 - 735723 + | putative phytochrome sensor protein TERM 1228 736829 - 736841 + G 70 -4.7 -4.52857 | overlap 736830 TGTGGCTTGTCGTTT ACGGC ATT GCCGC TTTTGTATACAGGAT TERM 1229 736967 - 736978 + G 77 -2.2 -5.0538 | overlap 736964 TCCCCCTGTTTCGTC TGGT CCGG ACCG TTTTTTCCGATCCCG TERM 1230 737558 - 737590 + G 80 -9.8 -4.19704 | overlap 737547 737575 GAATCCGGCACAGTG TCCGGTCTGTGTCG GCCCG TGTCGCGGACCGGA TTTTCGATCCGGTTC Dole_0619 735736 - 737883 + | M50 family peptidase TERM 1231 737961 - 737942 - g 84 -2.1 -5.40072 | gap 1, overlap 737945 737946 CCGCCCGGAAAAAAA GGAGCGGC GGCGG ACCG-TCC TGGACCGCCTGGCCT Dole_0620 737883 - 739889 + | preprotein translocase subunit SecA TERM 1232 740209 - 740190 - g 78 -9.2 -4.07568 | opp_overlap 740180 740171 GGCGGGCCTGGAAAA GGCCCAGG TTGA CCTGGCCC TGGCCCGGCTGGATT Dole_0621 739960 - 740697 + | secretion protein HlyD TERM 1233 740713 - 740731 + T 85 -8.1 -4.79955 | opp_overlap 740713 740716 CCGTTGCGCGCATAA CATCGGG ACTGC CCCGGTG TTTTCTTCTCGATGT Dole_0622 741539 - 740817 - | two component transcriptional regulator TERM 1234 740963 - 740983 + g 75 -3.8 -4.82901 | GATCGCCGGTATAGC CCCAGCCG ATCTC CAGCAGGG TTTTTCTGGCCAGGG Dole_0623 742507 - 741536 - | histidine kinase Dole_0624 743099 - 742620 - | hypothetical protein TERM 1235 742902 - 742940 + g 84 -7.5 -4.77438 | opp_overlap 742915, overlap 742916 CGTGATGGGGTGCAG GCACCGGAAACAGC-GCAG GGC CTCCTGCT-TTTCCGGGGC TTTTTCATCCTCGCT TERM 1236 742916 - 742929 + g 74 -8.1 -4.10855 | opp_overlap 742915, overlap 742902 GGCACCGGAAACAGC GCAGG GCCT CCTGC TTTTCCGGGGCTTTT TERM 1237 742946 - 742995 + g 72 -5.5 -4.42081 | gap 1, overlap 742949 TTTCCGGGGCTTTTT CATCCTCGCTGCCGGTGCGGGTGG CGG CCGACGGCGGCGTCAGC-AGGTTG TTTTCAATTTCTGTT Dole_0625 744197 - 743124 - | aminodeoxychorismate lyase TERM 1238 743594 - 743605 + g 75 -5.8 -4.57569 | TAAAGCGGTCCACCA TGGC GGTC GCCA TTTTTCGGGGAGTGG TERM 1239 744356 - 744343 - H 77 -3.9 -5.10208 | TAATTTTAATAAAAA CTTTT CAAA AAAAG AGGTGTGATGTGAAC Dole_0626 744366 - 745526 + | acyl-CoA dehydrogenase domain-containing protein TERM 1240 745866 - 745897 + G 93 -12.2 -4.36914 | overlap 745870 AAGCAGGCGTTTCTG GTGGCCGGCGGCAT CGGT GTGCCGCCGGTGGC TTTTCTGGCGCAGCA TERM 1241 745870 - 745893 + G 86 -16 -2.80077 | overlap 745866 AGGCGTTTCTGGTGG CCGGCGGCAT CGGT GTGCCGCCGG TGGCTTTTCTGGCGC Dole_0627 745533 - 746345 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 1242 746426 - 746439 + F 80 -3.1 -5.40474 | gap 1, overlap 746425 AGATTAAGAAACCGG TC-CGC TGG GCGTGA TTTTTTTGAAAACAT Dole_0628 746511 - 746750 + | hypothetical protein Dole_0629 746743 - 747138 + | hypothetical protein TERM 1243 747357 - 747379 + G 72 -4.8 -4.59773 | overlap 747358 747360 747377 AGTTCATGGTGAGCG TTACCGGC GAAGAGG GCCGGTGG TTTTTCCCGCTGGCA TERM 1244 747435 - 747448 + G 75 -5.9 -4.56597 | overlap 747432 TTTCCAACCTGATCG GCCTG GTGC CGGGC TTTTTCCCGCCCACG Dole_0630 747140 - 747829 + | ATP synthase F0, A subunit Dole_0631 747924 - 748214 + | ATP synthase F0, C subunit TERM 1245 748276 - 748240 - T 100 -23.1 -4.64657 | opp_overlap 748247, overlap 748247 GTAAAGTTTTAAAAA CAAAAAAGGGCCGCGCG TTT CGCGCGGCCCTTTTGCG TTTGTTCGTGTACTT TERM 1246 748269 - 748247 - T 100 -22 -5.93252 | opp_overlap 748247, overlap 748240 TTTAAAAACAAAAAA GGGCCGCGCG TTT CGCGCGGCCC TTTTGCGTTTGTTCG TERM 1247 748247 - 748269 + T 100 -22 -4.42851 | opp_overlap 748247 748240 TTTAAAAACAAAAAA GGGCCGCGCG TTT CGCGCGGCCC TTTTGCGTTTGTTCG TERM 1248 748336 - 748353 + T 83 -12.7 -3.07935 | overlap 748330 GCCCCTGGCAGCTTG GCCACGC CAAA GCGTGGC TTCCCTGGCTCAAAT Dole_0632 751619 - 748788 - | excinuclease ABC, A subunit TERM 1249 750577 - 750588 + g 70 -2.2 -4.83615 | overlap 750567 AGTACCTGCCGAAAG GCTT CCGG GAGC TTTTTGTAAGGGGTA TERM 1250 751003 - 751023 + g 85 -3.3 -5.3798 | gap 1, overlap 751008 ATACGCAGCCGGTCG GC-CACCA CCTCAA TGGTGTGC TTTTTGTTCTTGTTC Dole_0633 752751 - 751735 - | 4-hydroxythreonine-4-phosphate dehydrogenase Dole_0634 753709 - 752822 - | hypothetical protein TERM 1251 752910 - 752893 - G 75 -5.5 -4.56597 | overlap 752894 GGGGCCTTTCAAAAA TTGCCGT ACAT ACGGCAT TCAGCATGTTCAGTC TERM 1252 753262 - 753274 + g 85 -2.6 -5.626 | overlap 753259 753259 CCAGCCGGTCTTCCC GCCT GTGCA GGGC TTTTTTTATGGACTC Dole_0635 755017 - 753719 - | CBS domain-containing protein TERM 1253 754248 - 754267 + g 81 -2.8 -5.27923 | gap 1, opp_overlap 754240 GAGTCAACGCCGCTT CGG-GCG ATCACCA CGCACCG TTTTTTCTCCGGTTC Dole_0636 755313 - 756506 + | integrase family protein Dole_0637 756499 - 757419 + | hypothetical protein TERM 1254 758133 - 758117 - g 70 -4.3 -4.59773 | overlap 758118 CCGCATGGCGAAAAA CCCGAAC ATG GTCCGGC GCAAAAACATGGTTG Dole_0638 757776 - 758162 + | hypothetical protein TERM 1255 758265 - 758230 - f 100 -11.3 -5.04385 | opp_overlap 758235 758258, overlap 758231 TATAGCCTGAAAAAA CGAAAGGCCATTTCC GGGCGG GAAAACGGCCTTTCA AAAAGGATAAGTTAT TERM 1256 758264 - 758231 - f 90 -12.6 -3.61908 | opp_overlap 758235 758258, overlap 758230 ATAGCCTGAAAAAAC GAAAGGCCATTTCC GGGCGG GAAAACGGCCTTTC AAAAAGGATAAGTTA Dole_0639 758423 - 758809 + | hypothetical protein Dole_0640 760621 - 759461 - | hypothetical protein Dole_0641 761418 - 761008 - | hypothetical protein Dole_0642 761698 - 761429 - | hypothetical protein TERM 1257 761599 - 761613 + g 70 -2.2 -4.82901 | overlap 761601 GGTCGGCAATTGATT TGTTTT TAT AAAATA TTTTTGTGAAGGCCG Dole_0643 763269 - 762406 - | hypothetical protein Dole_0644 763689 - 764855 + | hypothetical protein TERM 1258 764907 - 764896 - f 74 -4.4 -4.8622 | opp_overlap 764890 764896 CCTGCTAATGAAAAA CAGT CAGG ACTG TTTTTGTTTATGGTG TERM 1259 764896 - 764907 + F 83 -4.4 -5.40464 | opp_overlap 764896, overlap 764890 CCTGCTAATGAAAAA CAGT CAGG ACTG TTTTTGTTTATGGTG TERM 1260 765009 - 764995 - f 85 -5.7 -5.0925 | CCGTAAAATTAAAAA GCTTG TCAAC CAAGC CGGTTGTGGCCTATA TERM 1261 765236 - 765219 - g 84 -12.7 -3.72893 | TACCGGGGCAGGAAA GCCGGTG ACGA CACCGGC CAAACCGTGATCGTC TERM 1262 765442 - 765425 - g 77 -2.5 -5.03314 | opp_overlap 765429 765431, overlap 765428 765429 TGTATCCTTAAAAAA GCAGGCC GCCA GGCAGGC GTTTTCCCTGGAACT TERM 1263 766115 - 766070 - g 74 -12.5 -2.92246 | gap 1, opp_overlap 766066 GGAAGCGGAAGCAGA CCGGCTGGTGGCCCTGTTCCGC CGG GTGGAGCAGGGG-ACCAGCCGC CTGGCCGTCATATCC Dole_0645 765141 - 770075 + | serine/threonine protein kinase Dole_0646 770132 - 770458 + | hypothetical protein Dole_0647 770465 - 772162 + | hypothetical protein TERM 1264 772227 - 772244 + F 100 -9.1 -4.88222 | gap 1, overlap 772230 CAAGCGGGTTACAGG GCACGGCC ACC GGCCG-GC TTTTTACATTTTCAT TERM 1265 772873 - 772837 - g 79 -13 -3.36273 | CTCGTCCAACATCAA GATGGTGGCCACCTCC ACCGA GGAGATGACCGCCACC ATCGCCGAGGTGGCC TERM 1266 773149 - 773122 - g 73 -12.7 -2.83233 | overlap 773119 CAACGAGATCAAGGA GCTGGCCTCGG CCACCT CCGAGGCCACC ATGGAGATCAAGAAC Dole_0648 772274 - 773551 + | methyl-accepting chemotaxis sensory transducer TERM 1267 773775 - 773749 - f 74 -10.8 -3.04269 | opp_overlap 773750 773752 773756 CGGATATCACATATA CGGGTGCCGG GCCGTTG CCGGCACCGG TCCGCTTCTTCTTTT TERM 1268 773750 - 773780 + F 71 -6.7 -4.20868 | gap 1, opp_overlap 773749, overlap 773752 773756 GGATATCACATATAC GGGTGCCGG-GCCG TTGC CGGCACCGGTCCGC TTCTTCTTTTCAACC TERM 1269 773756 - 773779 + F 73 -10.2 -3.11798 | opp_overlap 773749, overlap 773750 773752 CACATATACGGGTGC CGGGCCGTTG CCGG CACCGGTCCG CTTCTTCTTTTCAAC TERM 1270 773823 - 773850 + F 71 -9 -3.57144 | overlap 773828 ACACTTTTCGTGGAT GAGCGCAGGGCC GGCC GGCCCGGTTCTC TTTCCACGTGCCGGC TERM 1271 773828 - 773845 + F 73 -8.3 -3.82202 | overlap 773823 TTTCGTGGATGAGCG CAGGGCC GGCC GGCCCGG TTCTCTTTCCACGTG TERM 1272 774318 - 774329 + G 84 -7.2 -4.8667 | opp_overlap 774301, overlap 774300 TTTCAGGCGGCCCCG CCGG AAAC CCGG TTTTTCTGCGATATC TERM 1273 774765 - 774788 + G 95 -6.6 -5.40072 | overlap 774767 GATTCACCCGATTTT TACAGGCAGG GTCG CCTGCCCGAA TTTTTTTACAAAGAC Dole_0649 773895 - 774821 + | ribokinase-like domain-containing protein TERM 1274 775223 - 775237 + G 71 -10 -3.61371 | overlap 775231 GGGTACGTGGCGTCC CAGCTG GCC CAGCTG TTTGACATCGGGTTT TERM 1275 775301 - 775288 - g 70 -2.3 -4.82901 | overlap 775289 GGGCCGCCAGAAAAA GGAGC GGCT GCTCA AGGACGGCATGCGCG TERM 1276 776380 - 776402 + G 78 -11.2 -3.73224 | opp_overlap 776362 776363, overlap 776386 GAACCGCGTGGGGTT CGGTGTGGCC ACG GGCCGAACCG TTTCATCGGCCGTGG TERM 1277 776386 - 776419 + G 83 -11.8 -3.86015 | gap 1, overlap 776380 CGTGGGGTTCGGTGT GGCCACGGGCCGA ACCGTTTCA TCGG-CCGTGGCC TTTCTCAAGGAACTG Dole_0650 774818 - 777025 + | sucrose-phosphate synthase TERM 1278 777115 - 777142 + G 76 -12 -3.37091 | gap 1 TTGCGCCGCTATTTT GCCGATGC-CGCC GGT GGCGTGCATCTGC TTCCCTTTTACCCGT TERM 1279 777169 - 777184 + G 75 -11.8 -3.1855 | overlap 777161 777160 CCGTCGTCCGCGGAC CGGGGG TTTG CCCCCG TTACCTATTACCAGG TERM 1280 777532 - 777551 + G 79 -5.6 -4.73912 | overlap 777522 777533 GTCCAGTCCCCGGTC ACCCGGGA GCTG TTCCGGGA TTTTCTGATTTTTCT Dole_0651 777022 - 778470 + | sucrose phosphorylase TERM 1281 778629 - 778671 + G 77 -2 -5.14563 | gap 2, overlap 778629 TACGATTTTTTTTGT CCGGG-CAGTGGTG-GGC CTGGTGTTT GCCGTGCTGCTGACCCGG TTTTTTCATCCCGAG Dole_0652 778600 - 778779 + | hypothetical protein TERM 1282 779574 - 779543 - g 76 -2.9 -5.00884 | opp_overlap 779565, overlap 779544 779552 AGGGCCTGGAAAAAA CCGAGATCACC-CGC GGCG GCGTGGTGGGC-CGG CCGGACCAGCTTTTG TERM 1283 780010 - 780041 + G 77 -10 -3.83026 | opp_overlap 780006 780018 GTCATGACCAACCTT CCGGACAAGGCCCT GACA AGGGCCATGGACGG TTTGCTGTCGGGCCA Dole_0653 778789 - 780699 + | selenocysteine-specific translation elongation factor TERM 1284 780792 - 780774 - f 70 -2.4 -4.90906 | overlap 780768 780776 TGAGAACACGAAAAA TGTTTCCA ATC CGGAAAAA GGCCCCTTTATGGAT TERM 1285 780896 - 780910 + F 87 -12.8 -3.28791 | opp_overlap 780891 780890 CAATCAAAAGGTCCG CCCGGC AAA GCCGGG TTGTCAAGGAGAGAT TERM 1286 781247 - 781230 - g 72 -5.5 -4.55016 | overlap 781231 ATAAAAAACGCAAAA CCGTGGT CACC ACCACGC CGGCCCCTTATGCCC Dole_0654 780932 - 782062 + | hypothetical protein TERM 1287 782728 - 782686 - g 79 -5.8 -4.72986 | gap 3, overlap 782727 CATGCCCATTAAAAA GGCTCTGTTCGGCATCT-GGC TGGC GCCGAGA-ACCGAA-AAAGCC ATGCAGAACCTGGGC Dole_0655 782177 - 782773 + | hypothetical protein TERM 1288 782945 - 782983 + T 100 -17.5 -2.91276 | opp_overlap 782950, overlap 782950 782973 CACTGGAATGAAAAC AAAAAGGCCCCGCAAGC GAAAA GCATGCGGGGCCTTTTG CTTTCTAAGGCAGAA TERM 1289 782950 - 782978 + T 100 -17.4 -4.61873 | opp_overlap 782950, overlap 782945 782973 GAATGAAAACAAAAA GGCCCCGCAAGC GAAAA GCATGCGGGGCC TTTTGCTTTCTAAGG TERM 1290 782978 - 782950 - T 100 -17.4 -5.54338 | opp_overlap 782945 782950 782973 GAATGAAAACAAAAA GGCCCCGCAAGC GAAAA GCATGCGGGGCC TTTTGCTTTCTAAGG TERM 1291 782973 - 783004 + T 75 -8 -4.2558 | opp_overlap 782950, overlap 782950 782945 AAGCGAAAAGCATGC GGGGCCTTTTGCTT TCTA AGGCAGAATGCTCC TTTTGATACGGAATC Dole_0656 783549 - 783121 - | peptidylprolyl isomerase FKBP-type Dole_0657 783599 - 783841 + | hypothetical protein TERM 1292 783892 - 783925 + G 84 -2.3 -5.34555 | opp_overlap 783894 783898, overlap 783894 CGGGCGAATATTAAA AAGCATGGGGTTTCT TTTG AGGAAGCCCGCGCTG TTTTTTATGATGTGC TERM 1293 783923 - 783894 - g 74 -2.7 -4.87626 | opp_overlap 783892 783894, overlap 783898 GGCGAATATTAAAAA GCATGGGGTTTCT TTTG AGGAAGCCCGCGC TGTTTTTTATGATGT Dole_0658 783838 - 784131 + | hypothetical protein TERM 1294 784212 - 784232 + G 84 -12.6 -3.6422 | overlap 784210 CCGGTGACCATGCGC CTGGACCG GGACA CGGTCCAG TATTTTAAGACCATG Dole_0659 784128 - 784346 + | hypothetical protein TERM 1295 784395 - 784450 + T 74 -11 -2.89323 | gap 1, overlap 784399 TGGCGCGGGCGATTA TG-CAGGGGCAACCGGTGGTTGCCC ATCAGTC GGGCGACCGCCGGCCGCCCCTATCC TGTCTGCCCGCTTTT TERM 1296 784399 - 784445 + T 100 -20.8 -2.88999 | overlap 784395 GCGGGCGATTATGCA GGGGCAACCGGTGGTTGCCC ATCAGTC GGGCGACCGCCGGCCGCCCC TATCCTGTCTGCCCG Dole_0660 786099 - 784747 - | transposase IS4 family protein Dole_0661 786701 - 786210 - | hypothetical protein Dole_0662 787219 - 786689 - | hypothetical protein TERM 1297 787561 - 787573 + r 71 -6.9 -4.29953 | overlap 787558 AAGCCGAAGGCCAAG CTGCG GGG CGCGG TTCTTTTGGTACTTT Dole_0663 788478 - 787789 - | lysine exporter protein LysE/YggA TERM 1298 787974 - 787960 - G 80 -2.7 -5.24129 | overlap 787962 GTGGCCCAGAAAAAA GGCGG CAAAC CCGGC CGGGTTGGCAAAGGA TERM 1299 788074 - 788086 + g 72 -4.7 -4.56597 | opp_overlap 788067, overlap 788065 788075 GGAGACCAGTGCCCC GCCGG ACA CCGGG TTTTTCAACAGCCGC Dole_0664 789172 - 788630 - | nitroreductase TERM 1300 788951 - 788933 - G 80 -10.2 -4.0162 | opp_overlap 788928 TGCGCACAGCACAAA CACCGCCG GCG CCGCGGTG ATCGACTTTGCGGCC Dole_0665 789930 - 789220 - | enoyl-CoA hydratase/isomerase TERM 1301 790085 - 790042 - R 100 -23.4 -2.83403 | opp_overlap 790042 790048, overlap 790048 CCGGGGTCATGAAAC GTAAAAGCCCGCTGCCATGC CGAA GCATGACAGCGGGCTTTTAA TGTGTACTGTCAGGC TERM 1302 790042 - 790085 + r 100 -21.2 -2.97747 | opp_overlap 790042 790048, overlap 790048 CCGGGGTCATGAAAC GTAAAAGCCCGCTGCCATGC CGAA GCATGACAGCGGGCTTTTAA TGTGTACTGTCAGGC TERM 1303 790048 - 790079 + r 100 -20.2 -4.40237 | opp_overlap 790048 790042, overlap 790042 TCATGAAACGTAAAA GCCCGCTGCCATGC CGAA GCATGACAGCGGGC TTTTAATGTGTACTG TERM 1304 790079 - 790048 - R 100 -22.4 -4.37711 | opp_overlap 790042 790048, overlap 790042 TCATGAAACGTAAAA GCCCGCTGCCATGC CGAA GCATGACAGCGGGC TTTTAATGTGTACTG Dole_0666 790318 - 790118 - | HesB family selenoprotein Dole_0667 790441 - 790337 - | hypothetical protein TERM 1305 790498 - 790482 - R 73 -7.9 -4.09685 | opp_overlap 790481 790496 790497, overlap 790448 CCCGATGCCGTAAAA GCCGGTA TGT TCCCGGC AGTTTGTCTGCTTTA Dole_0668 791197 - 790610 - | appr-1-p processing domain-containing protein TERM 1306 790790 - 790810 + g 78 -8.9 -4.17089 | overlap 790805 GACGGCCGGAAAGGC GACCGAGGC CAG GCCCTGGTC TTTTGCCAGTTTCAG TERM 1307 791621 - 791597 - H 73 -10 -3.28261 | overlap 791600 ACAAGCCCAGAGGAA TGAGGCGTAC TGGTC GTACGCCGCA GTGACGAGGGGTGCG TERM 1308 791618 - 791600 - H 71 -10.3 -2.81725 | overlap 791597 AGCCCAGAGGAATGA GGCGTAC TGGTC GTACGCC GCAGTGACGAGGGGT TERM 1309 791751 - 791735 - H 74 -4.4 -4.87665 | gap 1, overlap 791736 CCTGATTCATAAAAA GGGATGC GAGA GCA-CCC TGAAACGCATCGAAA Dole_0669 791783 - 793054 + | histidyl-tRNA synthetase TERM 1310 793530 - 793503 - g 87 -6.8 -4.87665 | opp_overlap 793514 793515, overlap 793505 GGCCATGCAGAAAAA CCTTCTGGCCCG TCAC CGGGCCGGTATG GCGGCCCGGGAGTTT TERM 1311 793629 - 793649 + G 70 -3.8 -4.59853 | opp_overlap 793598, overlap 793630 793631 GGACTACCTGGTGCC CAGCCGGG TCAAT CCCGGCGC TTTTTACGCCCTTCC TERM 1312 794817 - 794803 - g 80 -2.1 -5.24129 | CCGGCGGACAAAAAA CAGCT GGATG AACTG TTTATCAAAGTAACA Dole_0670 793060 - 794853 + | aspartyl-tRNA synthetase TERM 1313 794994 - 794976 - g 93 -11.6 -4.56597 | overlap 794978 GGGCGTCCTGAAAAA GGCGGGCC TGC GGCCCGTC ACCAGCGACCTGATG TERM 1314 794992 - 794978 - g 71 -12.8 -2.60032 | overlap 794976 GCGTCCTGAAAAAGG CGGGCC TGC GGCCCG TCACCAGCGACCTGA TERM 1315 795190 - 795155 - g 71 -11 -3.22475 | overlap 795153 795156 GCCAGGGCCAGAACA CGGGCCGGCAGGCC ATGATCCG GGCCGGCCTGCCCA AGGAGACCCCGGCCA TERM 1316 795653 - 795667 + G 73 -11.4 -3.34398 | opp_overlap 795651, overlap 795651 ACATGGCGAAAATGT CCGGCT TAA AGCCGG TGTTTGCCAAGGACG TERM 1317 795990 - 795975 - g 71 -6.8 -4.24204 | CATTGACACGGAAAA GCCCAA CGAG CTGGGC AGCGGTATCTCCCTG Dole_0671 794857 - 796146 + | acetyl-CoA acetyltransferase Dole_0672 796186 - 796341 + | hypothetical protein TERM 1318 796418 - 796408 - f 77 -6.8 -4.62302 | GAATAGTTTTAAAAA GGTG ACA CACC AATGGAAGAGACCGC TERM 1319 798166 - 798137 - g 70 -12.1 -2.79831 | gap 1 GCAAGGTCTACGAGA TTCCCCAGGCCGGC CGG GCCAGCC-GGGGTA CGGCCATCGTGAACC Dole_0673 796420 - 798912 + | DNA gyrase, A subunit Dole_0674 798905 - 799945 + | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Dole_0675 799990 - 800751 + | DNA repair protein RadC Dole_0676 800735 - 801004 + | hypothetical protein TERM 1320 801528 - 801553 + G 76 -11.9 -3.44051 | GGATGTGGTTTCCCG CATCGCCCG CATGGCGC CGGGCGATG TTCTGATGCTGGAAA Dole_0677 801226 - 802416 + | phosphoglycerate kinase Dole_0678 802550 - 803632 + | hypothetical protein TERM 1321 804818 - 804800 - g 72 -5.2 -4.52589 | opp_overlap 804802 804815 GTGGTGGAGACAAAA GAGCCG GTGGACA CGGCCC GGGCCCAGACCCTGT Dole_0679 803678 - 804976 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 1322 805720 - 805733 + G 86 -3.1 -5.60993 | gap 1 TATGTGGCCTGTTCG TCG-GC CCT GCGCGA TTTTTTTGTCAACCG TERM 1323 805782 - 805796 + G 72 -9.2 -3.71284 | overlap 805772 TTCCACCGGCCTGCC CCCGGC GGT GCTGGG TTCTATTGATGCGGC Dole_0680 804973 - 806130 + | 8-amino-7-oxononanoate synthase TERM 1324 806718 - 806737 + G 80 -9.3 -4.14013 | opp_overlap 806716 ATGCCGGATATTACT CAGGCCT CCCTGA AGGCCTG TTTTGAAAGGTTTTC Dole_0681 806127 - 806759 + | dethiobiotin synthase TERM 1325 806859 - 806875 + G 80 -2.2 -5.18355 | gap 1, overlap 806860 806860 TGTCGCTGATCCGCA TG-CCGG ATGA CCGGACG TTTTTGCTTTTTCCC TERM 1326 806901 - 806913 + G 76 -3.4 -5.0133 | overlap 806886 TTCCCGGCGCCGACC TGCT GCGGG AGCA TTTTTTCGGCACATC TERM 1327 807360 - 807347 - g 72 -9.5 -3.63968 | overlap 807355 807356 GTCCAAACCGTGAAA GCGGC AAAG GCCGC CGGCCTGTCGGTCTG TERM 1328 807518 - 807508 - g 74 -8.2 -4.18494 | CACGGCCATGGAAAA GGCG AGC CGCC TGACCCCGCTGCGGT Dole_0682 806753 - 807757 + | biotin synthase TERM 1329 808024 - 808010 - f 79 -11.4 -3.14132 | GTGTTCGCCCATCAA GGAGCG CAG CGCTCC CCCCGTCATTGCGTA TERM 1330 808197 - 808210 + G 74 -8.1 -4.16943 | TTTTCAGCGTGGTGA CACCG GAGA CGGTG TTTTCCCATATCGAG TERM 1331 808741 - 808714 - g 82 -6.2 -4.82901 | gap 1, opp_overlap 808714, overlap 808715 GCCGGTTTACAAAAA GCCGGTGGTGGCT GTT ATCC-CCACCGGA GACGAGGTGGTGGCC Dole_0683 808169 - 809404 + | molybdenum cofactor synthesis domain-containing protein TERM 1332 809548 - 809536 - g 100 -9.1 -5.96894 | ACTTAAAGAAAAAAA GCCTC ACC GAGGC CCGGACCCTTCTGTT TERM 1333 809649 - 809591 - g 79 -13.7 -3.14848 | gap 1, opp_overlap 809605 809605 809643 809647, overlap 809590 809605 809621 GGCCCTTATGAAAAC CGCCGC-CGCCGAAACCGTTCCCACGCC AAAT GCCGTGGGCCGGGTTTTGGCCCGCGGCG TGCCGGCCCTGCGCT TERM 1334 809769 - 809752 - g 74 -7.7 -4.12456 | gap 1 AGACCACTCCCAAAA CCCTGGCC GTG GGC-AGGG AAGCCTTTTTTGTCA TERM 1335 810240 - 810224 - g 70 -3.6 -4.59853 | overlap 810225 CCAAGCCCTGAAAAA GGCCGT TGACG ACGGCG ATTACCAGGCGGTGA TERM 1336 810525 - 810499 - g 72 -4.4 -4.56597 | opp_overlap 810487, overlap 810500 TGCCGGTGCGAAAAA CCGTTTCCGCCA TCC TGGCAAAAAAGA CCGCTTCAAAGCTGG Dole_0684 809496 - 811442 + | molybdenum cofactor synthesis domain-containing protein TERM 1337 811668 - 811686 + F 100 -16 -3.07935 | GCCCCAGGCAGCTTG GCCACGCC GCA GGCGTGGC TTCCCTCGCTCAAAT Dole_0685 812027 - 812320 + | hypothetical protein TERM 1338 812397 - 812353 - f 100 -18.5 -3.7347 | GCTAACATTTAACAA GCTGCTGCTCTCCGACGCTCG TTC CTCGCGCCGGAGAGCAGCGAC GTTAAAAAAATCGAG Dole_0686 812511 - 812930 + | hypothetical protein TERM 1339 813319 - 813299 - g 79 -12.7 -3.19038 | overlap 813291 TGCAAAAGGAGGCAA CTGTTTCCA AAA TGGAAACAG TTCAACAGGAAGGCA TERM 1340 814057 - 814040 - g 100 -4.1 -5.89659 | gap 1, overlap 814043 ATAAAAAAAGAAAAA CAG-CCGA GGC CCGGGCTG CGGATAAGGAAGATT Dole_0687 813100 - 814128 + | putative DNA-binding protein Dole_0688 814168 - 814620 + | hypothetical protein TERM 1341 814669 - 814625 - f 95 -15.3 -2.53263 | overlap 814638 TTGACGTGTAATCCA TTTACCATGAAAATCCGGATT GAC ACTCCGAATTTTCATGGAAAA GGGATCAGGTCTTAT TERM 1342 815747 - 815714 - g 73 -11.7 -3.10344 | CGTTCAGGGAATACA TGGACCACGCCTTGA AGTT CCAGGGCGTGGTGCA GACAGACGGGGGCGC TERM 1343 816463 - 816480 + G 74 -8.3 -4.15044 | opp_overlap 816464, overlap 816464 GGTCAGCTGGAGATC ACGGCCG CTGC CGGCCGG TTTCTTCAGACCGGC TERM 1344 816503 - 816464 - g 95 -18.5 -2.62983 | opp_overlap 816463 816464 GTCAGCTGGAGATCA CGGCCGCTGCCGGCCGG TTTCTT CAGACCGGCACCGGCCG GGTGTCGCTTGCCAT TERM 1345 816464 - 816479 + G 73 -11.8 -3.08812 | opp_overlap 816464, overlap 816463 GTCAGCTGGAGATCA CGGCCG CTGC CGGCCG GTTTCTTCAGACCGG TERM 1346 817392 - 817380 - g 82 -10.5 -4.20696 | overlap 817373 817372 GGATGAACCCGAAAA GCCGG ACA CCGGC AAAGAGAATGACGAG TERM 1347 817418 - 817428 + G 70 -4.6 -4.45083 | ACGAGCCCCAGGAAG CGCC CAT GGTG TTTTCTCCCTATGGC Dole_0689 814816 - 817458 + | hypothetical protein TERM 1348 817556 - 817600 + G 88 -16.4 -3.09286 | overlap 817556 817577 TTGCCTATCCGGCCT GGGCCAGGGGCGGTACCC CCCCGGCAT GGCTGCCGCCCCTGGCCG CTTTTGCCGTGCTGT TERM 1349 817556 - 817601 + G 100 -16.2 -4.16681 | gap 1, overlap 817556 817577 TTGCCTATCCGGCCT G-GGCCAGGGGCGGTACCC CCCCGGCAT GGCTGCCGCCCCTGGCCGC TTTTGCCGTGCTGTT TERM 1350 818007 - 818031 + G 81 -3.6 -5.03747 | gap 2 CGCACAATCGGTTTA CGGGCTGATTCC CAT GGAA--GGCCCG TTTTTTGCCGCCTTT TERM 1351 818464 - 818476 + G 90 -4.7 -5.45726 | opp_overlap 818465, overlap 818452 818465 GCCTGGCAGGTGAAA AGCGC CTG GCGCA TTTTTTTGGACTATC TERM 1352 818475 - 818465 - g 74 -8.2 -4.13767 | opp_overlap 818452 818465 818464 CCTGGCAGGTGAAAA GCGC CTG GCGC ATTTTTTTGGACTAT TERM 1353 818573 - 818586 + G 74 -8.1 -4.24342 | CCCCCCGGCGTCATT TGCCC GGCC GGGCA TTTGTTCATAACGAC Dole_0690 817498 - 818874 + | hypothetical protein Dole_0691 819264 - 819010 - | hypothetical protein TERM 1354 819164 - 819174 + g 79 -5.4 -4.86731 | CCATCATAGGCGGTG TCGT GAA ACGA TTTTATTTCCGCAGG Dole_0692 820051 - 819326 - | 4-vinyl reductase 4VR TERM 1355 819723 - 819677 - G 93 -8.5 -4.72986 | gap 1, overlap 819678 CAGGGGCACCAAAAA CGAGGGGGCCCACCGGCCGCCC TCCA GGGC-ACAGGTGACCTCCCACG TGCAGAGGGCCACAC TERM 1356 819700 - 819678 - G 73 -11.3 -3.4331 | gap 1, overlap 819677 AGGGGCACCAAAAAC GAGGG-GGCC CACC GGCCGCCCTC CAGGGCACAGGTGAC TERM 1357 819726 - 819766 + g 73 -3.1 -4.72986 | overlap 819728 819731 GTGACCTCCCACGTG CAGAGGGCCACACCCATGT TGT ACAGGGCTGCTGCCTTCTC TTTTTCATCCAGGTG TERM 1358 820077 - 820088 + r 75 -5.8 -4.57569 | overlap 820068 820067 GTTTGTTGGTATCAG CCTG CTGC CAGG TTTTTGAAAAAATCG Dole_0693 821689 - 820073 - | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit TERM 1359 820686 - 820710 + g 75 -3.6 -4.74504 | overlap 820690 TCGGTTTCCAACTGC TCGACAAAGA TGCCC TCTTTGGTGA TTTTTGCCTTGAGGT TERM 1360 821075 - 821063 - G 78 -6.2 -4.56597 | TTCGGTCTTTAAAAA GGCC AGAAG GGCC TCGGAATTTAAAACA Dole_0694 823775 - 821988 - | lytic transglycosylase catalytic TERM 1361 822478 - 822518 + g 79 -14 -3.05384 | GTGGACAGGGTCTCG CCGGACCGGACCCGGT GGTAGGCAA ACTGGGTCTGGGCCGG TTCGGTGACGGGCAG TERM 1362 822662 - 822673 + g 84 -2.2 -5.44119 | overlap 822657 822656 CGTAGGCGATGCCGG TTGC CTCG GCGA TTTTTTTCAAATGGA TERM 1363 823156 - 823169 + g 81 -3.7 -5.04385 | overlap 823154 AGTTCGGCGGGCAGC CCGGC CTCG GCCAG TTTTTTGAGAATATG TERM 1364 823240 - 823228 - G 91 -4.7 -5.626 | GAGGCGATAAAAAAA GACCG CTC CGGGC CGGTGGTAAACAGGT TERM 1365 823631 - 823660 + g 70 -2.7 -4.8048 | gap 1, overlap 823633 823655 823656 823657 GACCGTCCACCGCCT CGGCGGT-GTCGGC TTC GCAGACGACCGGGG TTTTTCGTGTAAACG TERM 1366 823655 - 823687 + g 86 -5.6 -5.0538 | gap 1, opp_overlap 823674 823675, overlap 823633 823631 823656 823657 CGGCTTCGCAGACGA C-CGGGGTTTTTCGT GTAA ACGGGAAACCCCCTG TTTTTTCAGATAAAG TERM 1367 823656 - 823685 + g 80 -9.3 -4.15748 | opp_overlap 823674 823675, overlap 823633 823631 823655 823657 GGCTTCGCAGACGAC CGGGGTTTTTCGT GTAA ACGGGAAACCCCC TGTTTTTTCAGATAA TERM 1368 823657 - 823684 + g 76 -12.8 -3.08726 | opp_overlap 823674 823675, overlap 823633 823631 823656 823655 GCTTCGCAGACGACC GGGGTTTTTCGT GTAA ACGGGAAACCCC CTGTTTTTTCAGATA TERM 1369 823795 - 823809 + H 74 -2.8 -5.08086 | opp_overlap 823795, overlap 823790 TTGCAATCCTTAAAG GAAGTT TGA ATCTTC TTTTGTGTTTTTTGT TERM 1370 825485 - 825499 + G 75 -5.6 -4.57569 | opp_overlap 825482, overlap 825486 AGCAAAGAGGAAGGC GGGCGT CAT ACGCCG TTTTTCACCGGGTAC Dole_0695 824525 - 825718 + | elongation factor Tu TERM 1371 826315 - 826299 - g 75 -10.8 -3.68351 | opp_overlap 826300 GCGGCATGATGGAAA CCGGCC GCATG GGCCGG GCCGTTCAGTTCCTT Dole_0696 826097 - 826489 + | preprotein translocase, SecE subunit Dole_0697 826507 - 827037 + | NusG antitermination factor Dole_0698 827055 - 827480 + | ribosomal protein L11 Dole_0699 827493 - 828197 + | ribosomal protein L1 TERM 1372 828251 - 828276 + F 71 -10.5 -2.78655 | opp_overlap 828263, overlap 828248 AGGATATTTTAACTG CGCTGTTTGAA ACCG TTCAGACGGCG TGCATTATTTTCTGT Dole_0700 828429 - 828953 + | ribosomal protein L10 Dole_0701 829014 - 829400 + | ribosomal protein L7/L12 TERM 1373 829432 - 829472 + F 85 -13.6 -2.79796 | overlap 829428 GATGACGGTAAGGCG GCTCGACCCATTTTCGT-AT TTC ATGACGAAAGTGGGTCG-GC TGTCATGCCATGCAG TERM 1374 830045 - 830062 + G 78 -4.1 -4.93877 | gap 1 TGGTGGTGAGCCAGC TGCACCGG TCG TCGG-GCA TTTTCTTTGATCACG TERM 1375 830718 - 830753 + G 70 -2.5 -4.74215 | gap 3, overlap 830719 830719 CTACCGGCGTATTCG ACC-GGGCAAC--CCGGC CAC GCCGGAAGTGGCCCAGGA TTTTATTGATCATCT TERM 1376 831446 - 831419 - g 74 -6.2 -4.46493 | overlap 831439 831440 CCAAAGAGATTAAAA TGCTGCCCGCCT TTGA AGAAGGGGAGCA TCCCATTGCCCAGGC TERM 1377 832279 - 832268 - g 71 -7.2 -4.17048 | TGGTGGGCAAAATAA CGCC CAAG GGCG AGACGCAGCTCTCCC Dole_0702 829582 - 833688 + | DNA-directed RNA polymerase, beta subunit TERM 1378 834632 - 834618 - g 79 -12.8 -3.28712 | TGTGCTGTTCGACAA CGGCCG CCA CGGCCG GGCCGTCACCGGCAG TERM 1379 837826 - 837810 - g 74 -11.5 -3.5774 | opp_overlap 837789 837786 837813, overlap 837801 AGCCAATGGCGGAAA GCCCGCC GTG GGCGAGC CCCTGATTCTGGGTA TERM 1380 837859 - 837884 + G 77 -10.4 -3.90744 | overlap 837850 ACCAAGGCGTCTCTG GCCACGGAGA GCTTTA TCTCCGCGGC TTCTTTCCAGGAGAC Dole_0703 833692 - 838035 + | DNA-directed RNA polymerase, beta' subunit Dole_0704 838176 - 838547 + | 30S ribosomal protein S12 Dole_0705 838608 - 839078 + | 30S ribosomal protein S7 TERM 1381 840127 - 840141 + G 75 -5.6 -4.57569 | opp_overlap 840124, overlap 840128 AGCAAAGAGGAAGGC GGGCGT CAT ACGCCG TTTTTCACCGGGTAC Dole_0706 839167 - 840360 + | elongation factor Tu TERM 1382 840505 - 840495 - g 71 -8.2 -4.08394 | overlap 840496 ATACGGCCCGGAAAA CCGG GGC CCGG ATCGTGGGACCCATC Dole_0707 840404 - 840709 + | ribosomal protein S10 TERM 1383 840935 - 840908 - g 90 -4.8 -5.40072 | gap 1, opp_overlap 840925, overlap 840923 840926 GTTTTTGGAAAAAAA GGCCAGCAAGATC AAC AAGCC-GCTGGCC GGCCATTTCAAAAAG Dole_0708 840738 - 841364 + | ribosomal protein L3 TERM 1384 841355 - 841377 + F 71 -4.7 -4.57474 | opp_overlap 841354 841358, overlap 841357 GGAGATTCGGAAAAT CAACGCCTG ATTGG CAGGCGGCG TTTTGTGTCGCTTAA TERM 1385 841374 - 841358 - f 74 -9.4 -3.67622 | opp_overlap 841357 841355, overlap 841354 GATTCGGAAAATCAA CGCCTG ATTGG CAGGCG GCGTTTTGTGTCGCT TERM 1386 841633 - 841617 - g 82 -13.7 -3.28791 | ACTTTTTCGCCAGAA GGGCACG GGC CGTGCCC GGCGGGGCGATGTCA TERM 1387 841652 - 841675 + G 74 -8 -4.21812 | GGGGCGATGTCAAGT CGCCGCTGCT GAAA GGCGGGGGCG TTGTTTTCGGTCCCC Dole_0709 841414 - 842031 + | ribosomal protein L4/L1e Dole_0710 842031 - 842318 + | ribosomal protein L25/L23 TERM 1388 842462 - 842404 - g 100 -15.9 -3.68738 | CATTTGAAGAGATAA CCGCCGACCGGCCGTCCGAAAAGGGTC TCATC GAACCGTTGCGGAAAACCGGTGGGCGG AATGTCAATGGACGG Dole_0711 842331 - 843158 + | 50S ribosomal protein L2 Dole_0712 843205 - 843483 + | ribosomal protein S19 Dole_0713 843540 - 843884 + | ribosomal protein L22 Dole_0714 843900 - 844550 + | ribosomal protein S3 Dole_0715 844575 - 844988 + | 50S ribosomal protein L16 Dole_0716 844988 - 845176 + | ribosomal protein L29 Dole_0717 845210 - 845467 + | ribosomal protein S17 Dole_0718 845489 - 845857 + | ribosomal protein L14 Dole_0719 845887 - 846213 + | ribosomal protein L24 Dole_0720 846243 - 846782 + | 50S ribosomal protein L5 TERM 1389 846966 - 846951 - g 70 -4.6 -4.46212 | opp_overlap 846953, overlap 846953 GCCTTTATCAGAAAA TTCGGC ATCT GCCGTA TCTGCTTCCGGTCCA Dole_0721 846843 - 847028 + | 30S ribosomal protein S14 TERM 1390 847069 - 847053 - f 72 -10.1 -3.01924 | CATCCGGCGTGAATA CGGCAGA TCG CCTGCCG TCAGAAAGAAAACGA Dole_0722 847102 - 847500 + | ribosomal protein S8 Dole_0723 847517 - 848047 + | ribosomal protein L6 Dole_0724 848065 - 848439 + | ribosomal protein L18 Dole_0725 848516 - 849013 + | ribosomal protein S5 TERM 1391 849097 - 849084 - g 71 -8.1 -4.07568 | overlap 849087 CGGGCGGCCGGAAAA GCACC GGAA GGTGC TGCGGGCCATGGGGC Dole_0726 849052 - 849225 + | ribosomal protein L30 TERM 1392 849274 - 849262 - g 80 -10.5 -3.96291 | CACAAAGGCCAGAAA GCGCC TGG GGCGC GGCCCCGGGTCCGGC TERM 1393 849377 - 849406 + G 74 -6.9 -4.40199 | overlap 849397 GAGGGCGGTCAGATG CCCCTGCACCGGC GCCT GCCCAAGCGGGGG TTTGTTAATATTTTT Dole_0727 849212 - 849655 + | ribosomal protein L15 Dole_0728 849655 - 850944 + | preprotein translocase, SecY subunit Dole_0729 850986 - 851204 + | translation initiation factor IF-1 Dole_0730 851398 - 851781 + | ribosomal protein S13 Dole_0731 851807 - 852193 + | ribosomal protein S11 Dole_0732 852255 - 852881 + | RNA-binding S4 domain-containing protein Dole_0733 852995 - 854014 + | DNA-directed RNA polymerase, alpha subunit TERM 1394 854254 - 854244 - g 85 -3.2 -5.40072 | TGTTCGGGAAAAAAA CGTG GTG CACA AGCTGTTTGCCGAGG TERM 1395 854452 - 854428 - g 74 -7.7 -4.10855 | opp_overlap 854427, overlap 854418 854417 AAAACGGCGGCAAAA CCGGCCCCGAC CCC GTCAGCGCCCG CTGTTGAGAAAGAGG Dole_0734 854023 - 854649 + | ribosomal protein L17 TERM 1396 854676 - 854707 + T 80 -7.3 -4.64861 | gap 1, opp_overlap 854676 854697 854698, overlap 854699 ATAACGGATTGATAA GAGGGCTTGCGC GGAAATTAA GCGCG-GCCCTC TTTGTTTTGGCGGGC TERM 1397 854716 - 854726 + T 88 -8.2 -4.91109 | opp_overlap 854697 854698, overlap 854699 GGCCCTCTTTGTTTT GGCG GGC CGCC TTTTTCTCGTAGAGC Dole_0735 855736 - 854693 - | diguanylate cyclase with GAF sensor TERM 1398 855421 - 855410 - G 79 -7.2 -4.60487 | opp_overlap 855391 CAGCAGCTTGAAAAA GGGC TTCA GCCC GTCATTGGCCAGGAT TERM 1399 855662 - 855676 + g 78 -2.8 -5.04385 | GGAAAGGATCTTTTT TTCCAC CTC GTAGAA TTTTTTCGCGGTCTC TERM 1400 855842 - 855828 - R 73 -8.5 -3.92592 | AGTGTCAAGATTAAA GCCGG TCGGG CCGGC GTCACGCCAGGTATG Dole_0736 857104 - 855920 - | hypothetical protein TERM 1401 857134 - 857116 - R 88 -8.8 -4.89852 | CCATACCCAGAAAAA GACCCAGA TTT TCCGGGCC GAAATCAAAACCATC Dole_0737 858049 - 857189 - | hypothetical protein TERM 1402 857532 - 857549 + g 78 -6.2 -4.65895 | TGGCGCTCCACAAGC GGGCCG AGAAAC CGGTCC TTTTTCAGTGGCGGC Dole_0738 859997 - 858102 - | hypothetical protein TERM 1403 858588 - 858605 + g 72 -4.8 -4.57073 | GTTGCAGGGGTAGAT GTCCAG TTCGCC CTGGGC TTTTTCAGGCAGGTC TERM 1404 858767 - 858727 - G 71 -10.5 -3.53224 | opp_overlap 858728 858756, overlap 858728 CAGTCGCCTCTGAAA CCGGCGCCGTGCATGG-CC TCCTC GGTCCATACACGG-GCCGT TCCGTATATGTCCTG TERM 1405 858728 - 858766 + g 75 -11.8 -3.18065 | opp_overlap 858728 858727, overlap 858756 AGTCGCCTCTGAAAC CGGCGCCGTGCATGG-CC TCCTC GGTCCATACACGG-GCCG TTCCGTATATGTCCT TERM 1406 858766 - 858728 - G 76 -14 -2.71791 | opp_overlap 858728 858756, overlap 858727 AGTCGCCTCTGAAAC CGGCGCCGTGCATGG-CC TCCTC GGTCCATACACGG-GCCG TTCCGTATATGTCCT TERM 1407 861425 - 861392 - R 73 -2.5 -5.07486 | gap 3, opp_overlap 861413 861413, overlap 861396 861397 TATCGGCAATAAAAA CAACGGGCTCCAGCGG GTTTT CCGC-GGA-CC-GCTG CCGGTTTCCTTTTCT Dole_0739 862950 - 861664 - | CRISPR-associated TIGR02710 family TERM 1408 861741 - 861731 - G 84 -6.8 -4.86822 | AACGACACAATAAAA TCCC GCA GGGA CATGTACGCCGCTTC TERM 1409 862641 - 862672 + g 95 -10 -4.84359 | opp_overlap 862620 CCCGGCTGTGGCCCC GGCCGATGACGCGG GCCA CGGCCTCCTCGGCC TTTTTGTGGCAGTGC Dole_0740 864153 - 862978 - | CRISPR-associated RAMP Csm5 family protein TERM 1410 863971 - 864001 + g 82 -6 -4.77165 | overlap 863999 CATTTCCTTCAGGTC GGCCCGGTCGGC AAAGGCG GCAAACCGGGTC TTTTCTTCTGGAGAA Dole_0741 865082 - 864150 - | hypothetical protein TERM 1411 864807 - 864819 + g 73 -3.4 -4.72986 | TTCTGGAATATAGGC TGTC TTAGC GACA TTTTTGCTGAGGCTG TERM 1412 864846 - 864860 + g 87 -7 -5.00616 | overlap 864839 GCTGAACGCTTCCAG GGAGGG TTT CCCGCC TTTTTTCGCGGCCGG Dole_0742 865813 - 865085 - | CRISPR-associated RAMP Csm3 family protein TERM 1413 865347 - 865330 - G 70 -2.5 -4.81249 | opp_overlap 865330 865337, overlap 865332 865334 TCTCAAAGTCAAAAA GCGAGCC GGCC GGCACCC GTTCTGTCTTGCGGA Dole_0743 866328 - 865834 - | CRISPR-associated Csm2 family protein Dole_0744 868884 - 866347 - | CRISPR-associated Csm1 family protein TERM 1414 866434 - 866475 + g 74 -2.1 -4.88129 | gap 1, overlap 866445 866452 CGTGTGAAACATATT GTCC-AGGCCCAGCCGCTTG AGC CATTCGGCTATGCTTCGGGC TTTTTCGTCCTTTTT TERM 1415 868273 - 868254 - G 72 -4.8 -4.57569 | opp_overlap 868253 GTACCTCCTCAAAAA GCCGGGGC GAAA GCTCTGGC ATATCCTTGATTTTT TERM 1416 868870 - 868860 - G 70 -4 -4.57569 | overlap 868864 GCAGCGCGCCAAAAA TTAC TTC GTAA ATCGAATATGCCATG Dole_0745 870002 - 868896 - | CRISPR-associated protein APE2256 family TERM 1417 869138 - 869153 + g 77 -8.2 -4.329 | TCAGCCAGGGCTCAA GGCCGG AATG TCGGCC TTTATTGCTGTCTTC TERM 1418 869798 - 869810 + g 72 -4.8 -4.58395 | overlap 869795 AAAGGGCGTTTCTCT GGTC AAGCA GACC TTTTTCCAGAATGCC Dole_0746 871632 - 870439 - | CRISPR-associated NE0113 family protein Dole_0747 872561 - 871644 - | hypothetical protein Dole_0748 873512 - 872721 - | proto-chlorophyllide reductase 57 kD subunit Dole_0749 874508 - 873684 - | hydroxyethylthiazole kinase Dole_0750 874967 - 874533 - | MOSC domain-containing protein Dole_0751 875808 - 875173 - | methionine biosynthesis protein MetW TERM 1419 875623 - 875635 + gr 72 -10.5 -3.05294 | opp_overlap 875623 TCCTTTTTCAATGCA GCGGG CCA CCCGC TCTTCCACGATTTCA TERM 1420 875654 - 875670 + gr 75 -4.3 -4.74706 | overlap 875653 875656 TCCACGATTTCAATG CCGGTCT CCC GGACCTG TTTTTGGGTCTTGAG Dole_0752 876955 - 875780 - | homoserine O-acetyltransferase TERM 1421 876267 - 876284 + gr 74 -9.1 -3.62046 | gap 1 ATCATGCGGGCCACG GCCAGGCC CAT GGCC-GGC TTGTTGCCACCGTAG Dole_0753 878211 - 876952 - | O-acetylhomoserine aminocarboxypropyltransferase TERM 1422 877786 - 877833 + g 100 -10.7 -5.03314 | gap 1 GGTGACAGCGTTGTT TACGGCATCCAGGTCCAGGG GATTGACCG CCCTG-ACCGTGATGCCGTA TTTTTTAAAAATGCC Dole_0754 878674 - 878213 - | hypothetical protein TERM 1423 878477 - 878488 + g 75 -5.8 -4.60487 | opp_overlap 878477 GACGCTGACGGACAA CAGC AGCA GCTG TTTTTCCACGTGGTC TERM 1424 878694 - 878712 + H 71 -7.4 -4.0641 | opp_overlap 878692 AGGGAGCAAGTTATT CATACCAC AAT GTGGCATG TTTCTGTCAATAGAA Dole_0755 878748 - 879269 + | NifU domain-containing protein TERM 1425 879467 - 879445 - g 71 -6.9 -4.19276 | GGAAAAGCTGGAAAA GGCCCGCCA GTCCG TGGCTGACC TGATCAACTGCGACC TERM 1426 879823 - 879808 - g 100 -4 -5.99154 | gap 1, opp_overlap 879816, overlap 879809 TACTAAAGAAAAAAA GGTGCTG CTG CA-CACC GATGCCGTGGATTCG Dole_0756 879299 - 880462 + | aminotransferase class V TERM 1427 880484 - 880519 + T 100 -18.4 -3.48276 | gap 1, overlap 880485 880486 ATCGTAGGGTTTTTT TA-CGGGCGAATCCGCC GCC GGCGGGTTCGCCCGCTG TTGTCTGGCCCAACC TERM 1428 880485 - 880517 + T 100 -21.3 -3.31726 | overlap 880484 880486 TCGTAGGGTTTTTTT ACGGGCGAATCCGCC GCC GGCGGGTTCGCCCGC TGTTGTCTGGCCCAA TERM 1429 880486 - 880516 + T 100 -24.8 -2.58822 | overlap 880485 880484 CGTAGGGTTTTTTTA CGGGCGAATCCGCC GCC GGCGGGTTCGCCCG CTGTTGTCTGGCCCA Dole_0757 881048 - 880542 - | hypothetical protein Dole_0758 881598 - 881077 - | hypothetical protein TERM 1430 881159 - 881148 - G 79 -7.2 -4.56597 | overlap 881149 GGGCTCCTCGAAAAA GCGG GTTG CCGC AGTCCGGGCAGTGGT Dole_0759 882037 - 881633 - | thioesterase superfamily protein TERM 1431 881741 - 881721 - G 74 -6.1 -4.45083 | overlap 881725 CTGACATCGATAAAA CAGATTCGG GTG CCGAACTTG ACCACCTCGGATGTG Dole_0760 882567 - 882034 - | hemerythrin HHE cation binding domain-containing protein Dole_0761 883290 - 882643 - | hypothetical protein TERM 1432 883018 - 883028 + g 80 -4.6 -5.02476 | overlap 883013 CCGCACACTGGCGGC CCGG GCC TCGG TTTTTTGCAGGGTGT Dole_0762 884159 - 883359 - | arsenite S-adenosylmethyltransferase Dole_0763 885734 - 884466 - | major facilitator transporter TERM 1433 884625 - 884595 - G 91 -16.9 -3.55761 | GAGCCAGGTGGCAAA CATGGGGGTGGCG CCGCC CACCACCCCCACG CCCAGATTATACGCC TERM 1434 885588 - 885575 - G 72 -4.5 -4.57341 | overlap 885564 885563 885576 AACCGGCGGCAAAAA CGCCA TAGG TGGCA ATCAGGGCGGCCGTG TERM 1435 885647 - 885624 - G 74 -2.2 -5.00616 | overlap 885626 TTCCCCGGGAAAAAA CAGCCCGGAA AGGA TACCGGCCAG ATAACCGTAGAGCGC Dole_0764 886838 - 885912 - | hypothetical protein TERM 1436 886090 - 886102 + g 72 -9.1 -3.84719 | overlap 886091 TGCATGATGTTGTTT TCGCG ATC CGCGA TTTCGGTTTGGAAGT TERM 1437 886717 - 886703 - G 75 -4.2 -4.7497 | overlap 886705 886706 CGCACGGATCAAAAA CACCCG CGC CGAGTA TCGCGCAGAGGGCCA Dole_0765 887660 - 886995 - | hypothetical protein TERM 1438 887240 - 887252 + g 71 -10.5 -3.53012 | TCATCACCTCATGGG GGGCG GTC CGCCC TTTCCAGAAGAAGCC Dole_0766 888369 - 887740 - | type IV pilus assembly PilZ TERM 1439 887970 - 887980 + g 79 -6.8 -4.59853 | GAATCATGATCGACA GGTG TTC CACC TTTTTGAGGACTTCC Dole_0767 890995 - 888473 - | DNA internalization-related competence protein ComEC/Rec2 TERM 1440 888890 - 888878 - G 80 -10.5 -4.07568 | GCCGGGGTCGGAAAA CCCGG CGG CCGGG TAGAGAAGATCGACA TERM 1441 890202 - 890169 - G 82 -13.8 -3.21276 | overlap 890167 CCGGTTGCCACAATA CCCACGTGCAGGCC GGATAT GGCCAGCAGGTGGG CCACCCCGGACCGGA TERM 1442 890873 - 890854 - G 76 -4.8 -4.79955 | overlap 890855 ACACCCAGAAGAAAA TGGCCGGC CATG GCCGGGCC GCGGGCAAATACCGG Dole_0768 892438 - 891281 - | hypothetical protein TERM 1443 891635 - 891654 + g 71 -7.8 -4.07568 | opp_overlap 891629, overlap 891629 GTCGTGAAAGGCGAC GCGCGTCT TTTC AGACGGGC TTTTAAAAGGAAGCC TERM 1444 891796 - 891815 + g 78 -6.4 -4.56597 | overlap 891798 TCTTCTGAACGCCCC TGTCGGCA AAGG TGCCGATG TTTTTGCCGGCCAGA TERM 1445 891798 - 891813 + g 72 -9 -3.90048 | overlap 891796 TTCTGAACGCCCCTG TCGGCA AAGG TGCCGA TGTTTTTGCCGGCCA TERM 1446 892009 - 891998 - G 83 -5.8 -5.00616 | opp_overlap 892006 GTCTCCGGCAAAAAA CAGG TACT CCTG GCCGGAAAATTCGGG TERM 1447 892039 - 892054 + g 89 -6 -5.10497 | GCACGTCCGTTCCCT CGCGCC AGGC GGCCCG TTTTTTGGCTGACTT Dole_0769 893837 - 892440 - | FAD linked oxidase domain-containing protein TERM 1448 892707 - 892677 - G 78 -3.2 -5.1287 | overlap 892680 GGCATAGGCAAAAAA GAACATCATGGC ATGGCCG GCCCCGATGATC CGGGCTCCCAAAGAG Dole_0770 894864 - 893842 - | hypothetical protein TERM 1449 894393 - 894406 + g 70 -3.7 -4.57569 | CTTTGGGCACCCGCT CCCGG ATCA CCGAG TTTTTGGCAAAGTGA TERM 1450 894950 - 894924 - R 78 -12.2 -2.67667 | opp_overlap 894924, overlap 894923 894921 TCATTTATGAAATAT CCGGGTTACCGG TGG CCGACACCCCGG TTGTGCTGTTTCGCG Dole_0771 895666 - 894929 - | heat shock protein DnaJ domain-containing protein TERM 1451 895624 - 895600 - G 78 -11.4 -3.73914 | overlap 895616 895619 AGCAGGTATCAATAA CGGCTGCCGC GGGAA ACAGCAGCCG GCAGGCGTGTACGAC Dole_0772 898518 - 895810 - | peptidase C14 caspase catalytic subunit p20 TERM 1452 896917 - 896949 + g 75 -8.4 -4.09685 | overlap 896881 896880 896881 GTCGGCCACGGTGCG GAGGTGTTTCAGGG AACCG CCTTGAAGCGCCAC TTTTACCAGGTCGGG TERM 1453 898586 - 898554 - R 100 -17.9 -4.78764 | opp_overlap 898555, overlap 898555 GAAAGGTATCAAAAA GCGACAGGGACAAAA GGC TTTTGTCCCTGTCGT GTCATTCCGGGGCTG TERM 1454 898555 - 898585 + r 100 -21.4 -2.90194 | opp_overlap 898554 898555 AAAGGTATCAAAAAG CGACAGGGACAAAA GGC TTTTGTCCCTGTCG TGTCATTCCGGGGCT TERM 1455 898585 - 898555 - R 100 -21.4 -3.46174 | opp_overlap 898555, overlap 898554 AAAGGTATCAAAAAG CGACAGGGACAAAA GGC TTTTGTCCCTGTCG TGTCATTCCGGGGCT Dole_0773 899861 - 898641 - | aspartate kinase TERM 1456 898875 - 898913 + g 81 -3.2 -5.31275 | gap 3, overlap 898840 898880 898894 898895 CATCACCTCTTCGGC GCCGATGGCC-TTGC-CGG TTTC CTGGGCAATGGCCAG-GGC TTTTTTATAGTCCCC Dole_0774 900409 - 899915 - | hypothetical protein Dole_0775 901964 - 900363 - | carbohydrate kinase, YjeF related protein TERM 1457 900543 - 900530 - GR 81 -3.7 -5.06414 | overlap 900531 GGCCGTGAAGAAAAA CGCCC AGCC GGGCC GCAATCCCTGTCTCA TERM 1458 901126 - 901174 + gr 100 -11.6 -4.56597 | opp_overlap 901125 901124 GCCAGGGTTACAAGG CCGGCGCCGGACCGCATGG-CGGC AAT GCCGACCATG-GCCGCGGCCCCGG TTTTTCCGGCGGACC TERM 1459 902022 - 901989 - R 70 -8.1 -3.84451 | overlap 901983 CCCTTTAAATCGAAA TCGCTATCGGGATCG GTAT CGGTATCGATAGCGA TACAACTCTACGGTT TERM 1460 902284 - 902300 + r 77 -4.3 -5.03314 | overlap 902285 CTGCGGCCAAGGCGG CTCGCCC GAA GGGTGAA TTTTTTCGACATACA Dole_0776 903128 - 902418 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 1461 902615 - 902638 + g 83 -4.7 -5.08824 | gap 1 CCACGGCCTTTCGAA TCCGGTCAAA CTCTT TTTGAC-GGA TTTTTTCGGTGGCGG TERM 1462 902967 - 902935 - G 74 -6.7 -4.4648 | opp_overlap 902934 ATCTCCAGGATAAAA CGGCGGGCGGCGGCC CGG AGCCGCACCACGTCG GTGTCCTGAATGTGG TERM 1463 903193 - 903217 + r 70 -10 -3.17714 | overlap 903196 TGCACCCCTCGTCAC TGCGGCGTAC AACAA GTACGCCTCA TTCCTCGGGATTTGC TERM 1464 903196 - 903214 + r 71 -10.3 -2.78395 | overlap 903193 ACCCCTCGTCACTGC GGCGTAC AACAA GTACGCC TCATTCCTCGGGATT Dole_0777 903602 - 903309 - | hypothetical protein TERM 1465 903675 - 903687 + r 71 -4.8 -4.59773 | GGCCAAGGCGTTTAA GACG GCCTG CGTC TTTTTCAGAATCCGG Dole_0778 906027 - 903652 - | metal dependent phosphohydrolase TERM 1466 905094 - 905107 + g 70 -2.3 -4.74103 | overlap 905077 905095 CCCCCAGGGAGGTGG CCAGG GAGT CCTGA TTTTTGGCTTCCGCC TERM 1467 905220 - 905244 + g 83 -5.6 -4.91084 | gap 1 AGGCCACCTGGCTGA CGCTGGCCTGG GCAT CCT-GCCGGCG TTTTTCGGTTTTGTT TERM 1468 905549 - 905559 + g 85 -2.6 -5.61881 | overlap 905541 905555 ATCAGGATTTCAATT TTTT TTG AAAA TTTTTCTTTTTCCAG TERM 1469 905555 - 905565 + g 70 -4 -4.58395 | overlap 905541 905549 ATTTCAATTTTTTTT GAAA ATT TTTC TTTTTCCAGAATGCC TERM 1470 905793 - 905805 + g 83 -4.7 -5.10461 | TCAGCACGCGGTCCC CGGCC TGT GCCCG TTTTTCTTCCGTGGC TERM 1471 906194 - 906165 - R 75 -5.8 -4.52589 | gap 1, overlap 906188 GGTTTTTATAGAAAA GCGGCGCACTTTT CAAGC AAAAAC-CGCCGC CGGGGGAGAGAATAA TERM 1472 906200 - 906188 - R 77 -4.7 -4.8622 | overlap 906165 CTTTTCAAGCAAAAA CCGCC GCC GGGGG AGAGAATAAGATAAA TERM 1473 906232 - 906250 + r 90 -5.9 -5.5112 | CGATTTTATTTCAGG CCGTTGG ATATA CCATCGG TTTTTTCTTCATAGG Dole_0779 907217 - 906222 - | PhoH family protein TERM 1474 907100 - 907113 + g 72 -4.5 -4.62069 | CGATTTTTACCCCCA GGTCG GCGG CGATC TTTTTCAGGTGGCCG TERM 1475 907539 - 907557 + G 82 -10.2 -4.15044 | TTTTTATCCCCATGC GGCCGGAA AAT TGCCGGCC TTTATTCCCGGGGGG Dole_0780 907396 - 907917 + | colicin V production protein TERM 1476 908604 - 908594 - g 70 -4 -4.61231 | CGATACCGTGAAAAA GTTT GAA AAAC GGTTCATTTATATAG Dole_0781 907905 - 908714 + | MazG family protein TERM 1477 908702 - 908715 + F 100 -5.3 -5.86061 | opp_overlap 908702 GGACGAAGCAAAATC GTTAC AGGT GTAAC TTTTTTTTCGTGCCC TERM 1478 908988 - 908964 - g 71 -7.2 -4.11216 | gap 1, opp_overlap 908964 CGGGGACCCGGAAAA GATC-GCCGCT GCCG AACGGCTGATC TTTCCCGGCGTGGGC TERM 1479 909449 - 909437 - g 83 -4.7 -5.03314 | opp_overlap 909439, overlap 909438 909439 TCCACCCGGAAAAAA GCGGC CGG GCCGG ACTTCGTATTCTGGA Dole_0782 908863 - 909492 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 1480 909617 - 909627 + G 83 -5.4 -5.02074 | opp_overlap 909625 TTACGAGGCCGGGGC CGAT GAG ATCG TTTTTTACGACATCA TERM 1481 910170 - 910156 - g 71 -12.8 -2.54896 | overlap 910152 CCCTGACCGAAGGCA GGGCCG ACG CGGCCC TGATCGCCTCCATGG Dole_0783 909486 - 910265 + | imidazoleglycerol phosphate synthase, cyclase subunit Dole_0784 911102 - 910473 - | hypothetical protein TERM 1482 910941 - 910918 - G 77 -2.2 -5.14563 | overlap 910919 GCGCCCATGAAAAAA TCCGCGCCGC CGGT GCTGCCCTGA ATGGTGCCGATATCA TERM 1483 911321 - 911336 + H 77 -10.4 -3.54424 | opp_overlap 911320 GTGTTTCCAAGCCAG TCCCGC CATG GCGGGA TTTCGCAAGATCAAG TERM 1484 911666 - 911654 - g 80 -4.7 -5.00616 | overlap 911655 GTTGGCCTTAAAAAA GGGCG CAT CGCCG GCAACAACGGATATT TERM 1485 911921 - 911909 - g 71 -6.9 -4.17657 | overlap 911910 GACGATATTCGAAAA CGGCG CAA CGCCA TTGACGCCCTTGACC Dole_0785 911471 - 912847 + | hypothetical protein Dole_0786 914005 - 912869 - | hypothetical protein TERM 1486 913360 - 913381 + g 75 -12.3 -3.28712 | CCTTGAAGGATTCCC GCAGCGGGT CAGG ATCCGCTGC TTCTGAAAAGCGAAG TERM 1487 913659 - 913677 + g 72 -4.5 -4.67011 | opp_overlap 913645 CCGACCCTGTCCGTT TCCGGGT CACGA AACCGGA TTTTTCCCTCACATT TERM 1488 913991 - 913975 - G 70 -4.4 -4.48987 | gap 1, opp_overlap 913975, overlap 913976 913977 CGGCCAGAAGCAAAA TGGCCGC CATG GCGG-CA GTGATTGAACGCATT Dole_0787 915375 - 914227 - | platelet-activating factor acetylhydrolase plasma/intracellular isoform II TERM 1489 914310 - 914337 + g 77 -2.6 -5.08824 | overlap 914312 GGGTAAGCAGTGGGT CACTCCGGTC CAGCACGT GACCGGCGTC TTTTTTACCTGCGAC TERM 1490 915536 - 915562 + r 87 -10.9 -4.08974 | gap 1 GACGCTAACGGGTGC CACGGGCCAGGC GACA GCTTG-CCCGTG TTTGTCTCATAAGGT TERM 1491 915690 - 915678 - R 71 -6.9 -4.29953 | overlap 915675 AAAGTACCAAAAGAA CCGCG CCC CGCAG CTTGGCCTTCGGCTG TERM 1492 915760 - 915746 - R 75 -11.4 -2.56596 | opp_overlap 915731, overlap 915742 GCGGGCAGGAACTCA TCCCGC TTC GCGGGA TTCAGACAGCCTGCC TERM 1493 915891 - 915880 - R 73 -7.2 -4.13995 | TTTTTACAAATCAAA CCGC CCCG GCGG GAACTTGTCGCCAAC Dole_0788 916669 - 915875 - | hypothetical protein TERM 1494 916329 - 916318 - G 75 -3.6 -4.83169 | ACTGCCTGAGAAAAA CCGA GTGC CCGG CGTGAAACCCGCAGA TERM 1495 916383 - 916412 + g 78 -4.2 -4.87665 | gap 1, opp_overlap 916373, overlap 916383 AGAAACAGGCCCATG CC-GATGCCTGCC ACAAG GGCGGCCGTCCGG TTTTTCTGACTCAAA TERM 1496 916725 - 916755 + r 77 -10.6 -3.57013 | overlap 916721 GTTTGGCTTGTAGGA CTATTCCCAATATA TGA TTTGTTGGGAATAG TTAATTCTGTATTTT Dole_0789 917600 - 916725 - | hypothetical protein TERM 1497 917252 - 917270 + g 79 -5.3 -4.72029 | CCCCTGAGCTGTCTA CCCAAGA ATATA TTTTGGG TTTTGTTGAGTTAAC TERM 1498 917718 - 917679 - R 100 -17.2 -4.38712 | opp_overlap 917682, overlap 917680 917682 917685 TGCAGTTTTAGAAAA GTACAACAGGAGACGCGG CCTT CCGCGTCCCCTGTTGTTT TGTGGATATCTTGCC TERM 1499 917717 - 917680 - R 100 -20.7 -3.22906 | opp_overlap 917682, overlap 917679 917682 917685 GCAGTTTTAGAAAAG TACAACAGGAGACGCGG CCTT CCGCGTCCCCTGTTGTT TTGTGGATATCTTGC TERM 1500 917682 - 917715 + r 100 -21.1 -4.46757 | opp_overlap 917680 917679 917682 917685 AGTTTTAGAAAAGTA CAACAGGAGACGCGG CCTT CCGCGTCCCCTGTTG TTTTGTGGATATCTT TERM 1501 917715 - 917682 - R 100 -23.3 -3.17598 | opp_overlap 917682, overlap 917680 917679 917685 AGTTTTAGAAAAGTA CAACAGGAGACGCGG CCTT CCGCGTCCCCTGTTG TTTTGTGGATATCTT TERM 1502 917712 - 917685 - R 100 -19.2 -3.72405 | opp_overlap 917682, overlap 917682 917680 917679 TTTAGAAAAGTACAA CAGGAGACGCGG CCTT CCGCGTCCCCTG TTGTTTTGTGGATAT Dole_0790 919823 - 917745 - | two component regulator propeller domain-containing protein TERM 1503 919400 - 919378 - G 83 -5.5 -5.00884 | opp_overlap 919392, overlap 919381 AGCTCTGTTAAAAAA TCACCCCTG GCCAG CAGGGGAAA TCCCAGTCCGTTAAG TERM 1504 919973 - 919985 + r 90 -9.1 -4.56775 | GAAAAGAGGGGCAAG GGGGA AGT TCCCC TTTTTGACGCAAAAT TERM 1505 920002 - 920028 + r 71 -7.3 -4.07568 | opp_overlap 920001 920021 TTTTGACGCAAAATG TCGGTCAGGCT GGCAA AATCTGACCGA TTTTACCGGCCGGGG Dole_0791 921119 - 920127 - | beta-lactamase domain-containing protein TERM 1506 920955 - 920941 - G 75 -4.2 -4.82901 | TTGTCGGTATAAAAA TCCACC AGG GGCAGA ATGGAAACCGAATCC Dole_0792 921503 - 921123 - | hypothetical protein TERM 1507 921460 - 921493 + g 83 -5.3 -4.98255 | overlap 921454 CCGGTCAGGGGGCAG CGGTCCTGATTTTTT TCGC AACGGATCAGGGCTG TTTTTGTCATTGGAA TERM 1508 921818 - 921843 + G 76 -4.8 -4.80455 | gap 1 ACCTGTTGCTATGCC TGGGTGCTGAT GACAA ATCA-CGCCCA TTTTCTGTTTCGATC Dole_0793 921659 - 922666 + | hypothetical protein TERM 1509 922754 - 922715 - T 100 -18 -4.08767 | gap 1, opp_overlap 922716 922719, overlap 922717 922719 GGCACTTTTGGAAAA CAGACCGGCGGAAGCGAAA TTG TTTCGCTCCCGCCGGTG-G TTTTAAAGTGTGCCC TERM 1510 922716 - 922754 + T 100 -16 -4.16943 | opp_overlap 922715 922717 922719, overlap 922719 GCACTTTTGGAAAAC AGACCGGCGGAAGCGAAA TTG TTTCGCTCCCGCCGGTGG TTTTAAAGTGTGCCC TERM 1511 922753 - 922717 - T 100 -21.7 -3.6422 | opp_overlap 922716 922719, overlap 922715 922719 CACTTTTGGAAAACA GACCGGCGGAAGCGAAA TTG TTTCGCTCCCGCCGGTG GTTTTAAAGTGTGCC TERM 1512 922719 - 922751 + T 100 -22.1 -3.10545 | opp_overlap 922719 922717 922715, overlap 922716 CTTTTGGAAAACAGA CCGGCGGAAGCGAAA TTG TTTCGCTCCCGCCGG TGGTTTTAAAGTGTG TERM 1513 922751 - 922719 - T 100 -24.3 -3.39908 | opp_overlap 922716 922719, overlap 922717 922715 CTTTTGGAAAACAGA CCGGCGGAAGCGAAA TTG TTTCGCTCCCGCCGG TGGTTTTAAAGTGTG Dole_0794 924263 - 922791 - | sodium/sulphate symporter TERM 1514 924413 - 924456 + r 74 -3.1 -5.06451 | gap 2, overlap 924427 TCTGCGTCAAACTGC GGGCTTCCTTGTGCGGCGTAC AGCA GTACGCCTT-CA-GTCAGCCC TTTTTTCCCCTGATC TERM 1515 924427 - 924444 + r 74 -11.3 -3.06312 | overlap 924413 CGGGCTTCCTTGTGC GGCGTAC AGCA GTACGCC TTCAGTCAGCCCTTT TERM 1516 924495 - 924480 - R 77 -10.4 -3.54424 | opp_overlap 924479 CCTGATCTTGCGAAA TCCCGC CATG GCGGGA CTGGATTGGAAACAC Dole_0795 925204 - 924644 - | CBS domain-containing protein Dole_0796 926998 - 925265 - | hypothetical protein TERM 1517 925769 - 925789 + g 93 -11.1 -4.56597 | opp_overlap 925755, overlap 925771 ATACCGGTCCACGGA CAGGTCCAC GGT GTGGACCGG TTTTTGAGGCGAAAC TERM 1518 925821 - 925843 + g 74 -8.3 -4.23892 | opp_overlap 925813 925811, overlap 925823 AAATTGACCGCGCCT TTGGCCGCC ACCGA GGCGGCCTG TTTTAAATCCTTACC TERM 1519 925823 - 925841 + g 84 -13.1 -3.71745 | opp_overlap 925813 925811, overlap 925821 ATTGACCGCGCCTTT GGCCGCC ACCGA GGCGGCC TGTTTTAAATCCTTA TERM 1520 926032 - 926044 + g 100 -10.5 -5.8096 | CGCCTTTTCCCCGTT CCGGC GGC GCCGG TTTTTCTTTTTTGTC TERM 1521 926381 - 926391 + g 70 -2.4 -4.78029 | opp_overlap 926377 AAGGCCGGAAAGCCC CCTG GCG CCGG TTTTGATTTTGTTGA TERM 1522 926612 - 926629 + g 80 -4.7 -5.00616 | overlap 926613 TTTTTCGGCGTTTTT TGGCCGG TCTG CCGTCCG TTTTTTAACGGCGCC Dole_0797 927517 - 927011 - | hypothetical protein TERM 1523 927779 - 927827 + H 88 -7.4 -5.08169 | gap 1, opp_overlap 927779 927795 CGGCAGGGTAAAAAG CCCTTAACCCGATAGATCGCCCG GCAA CGGGTGAA-TGCGGGGTTGAGGG TTTTTTAGAATCTCT Dole_0798 927875 - 928159 + | hypothetical protein TERM 1524 928358 - 928339 - g 82 -6.3 -4.82901 | TGGCGCCGACAAAAA GGCGGCG CATTAC CGCGGCC CTCGGATCCATGGGC Dole_0799 928194 - 928538 + | hypothetical protein Dole_0800 928606 - 929571 + | ATP synthase F0, C subunit Dole_0801 929650 - 930324 + | ATP synthase F0, A subunit TERM 1525 930520 - 930505 - g 78 -6 -4.60041 | overlap 930495 930506 AGCCATCGGCAAAAA CCCGGC CGAG GCCGGC CTGCTGACCCGGACC Dole_0802 930368 - 930616 + | ATP synthase F0, C subunit TERM 1526 930669 - 930699 + F 78 -11.9 -3.05384 | opp_overlap 930684, overlap 930658 930671 CGGGCCGTTTTATGC CGCCGTGGCAGAA AACCG TTATGCCACGGTG TTGAATAAAAGCGGC TERM 1527 930671 - 930697 + F 74 -10.9 -3.08679 | opp_overlap 930684, overlap 930658 930669 GGCCGTTTTATGCCG CCGTGGCAGAA AACCG TTATGCCACGG TGTTGAATAAAAGCG TERM 1528 930751 - 930736 - f 85 -7.6 -4.74504 | AGCGGAATCTAAAAA CACGAA ATTT TTCGTG CAAGTGGGAACAACA Dole_0803 930766 - 931224 + | H+transporting two-sector ATPase B/B' subunit TERM 1529 931776 - 931787 + G 83 -5.8 -5.0133 | CAGGACCAGGCCCGG CAGG TGGA CCTG TTTTTTACCAGCCTG Dole_0804 931221 - 931850 + | H+transporting two-sector ATPase B/B' subunit TERM 1530 931895 - 931946 + F 100 -20.3 -3.95836 | opp_overlap 931891 ACACTCAGAATTTTA CACCCCCCGTTCGGATCGGAATC AGACAA GATTCAGATCAGGATGGGGGGTG TTCTGTTTTCAGCGT TERM 1531 932263 - 932253 - f 73 -3.2 -4.98531 | CCGTCAAAGGAAAAA CAGT CTC ACCG AAAAAAAGTGCTTGA TERM 1532 932604 - 932618 + G 78 -8.5 -4.16284 | opp_overlap 932598, overlap 932598 GAGACCGAACCGGAA GCCGC CTTTC GCGGC TTTATTCACGCCTAT TERM 1533 932819 - 932855 + G 81 -2.9 -5.18371 | opp_overlap 932830 CCGGCCGGTGGACCC CATGCAGACCACCATCA GCG TGGTGGGCATGTGCATG TTTTATTTTGTGGCC Dole_0805 932367 - 932981 + | TetR family transcriptional regulator TERM 1534 933719 - 933709 - g 71 -8.2 -4.08064 | overlap 933710 AATGCCGTGGCAAAA GCCG GCG CGGC ACTGGCCAGAAGCAT TERM 1535 933891 - 933864 - g 77 -14 -2.99471 | GGACCGGCAGATAGA GGCGGCCGGGGC CCGT GCCAGGGCCGCC CGCGGGGCACGGCGG TERM 1536 934118 - 934094 - g 71 -7.1 -4.13282 | overlap 934095 AGCAGACCGCCAAAA GCCTGGACAAC CGC ATTGCCCAGGA ACGGGTTGTGGCCCG TERM 1537 934236 - 934219 - g 80 -2.6 -5.23316 | overlap 934221 934224 TACCAGACCAAAAAA GACCAC TTCCAG GTGGGC ATTGCCACCAGCACC Dole_0806 932989 - 934377 + | outer membrane efflux protein TERM 1538 934888 - 934877 - g 75 -5.8 -4.60041 | ATCGACGTGGAAAAA CTGG AACT CCAG CGAAAACGCCTGGCT TERM 1539 935095 - 935083 - g 72 -4.7 -4.56597 | overlap 935084 935086 935087 TGCCGTGGCCAAAAA CCAGG TGG CCGGG GCCCGGGCCCAGCTG TERM 1540 935156 - 935131 - g 72 -4.6 -4.62069 | GCTGGACGCGAAAAA GGCCCAGATC GAGGCG GAACTGGCCC TGGCCGACCGGCAGA Dole_0807 934616 - 935548 + | secretion protein HlyD family protein TERM 1541 935603 - 935585 - g 95 -6.6 -5.47821 | overlap 935589 AGGGATTGAAAAAAA GCTATGGC CCG GCCACGGC CCTGGCATCGGTGGA TERM 1542 935825 - 935844 + G 80 -4.9 -5.0133 | TTTACCCGGACCTCA CCGTGGG AGAGAA CCTGCGG TTTTTTGCCGACCTG TERM 1543 936044 - 936076 + G 78 -9.7 -4.08216 | AGCCCACCACCGGCG TGGACCCGGTCTCCC GCC GGGAGTTCTGGGCCA TTTTGCGGGAACTCA TERM 1544 936316 - 936337 + G 86 -8.7 -4.59773 | gap 1 CAGGTGAGAATTGTA GGC-GACCGG GTC CTGGTCAGCC TTTTTGAAAATGCCC TERM 1545 936405 - 936444 + G 72 -8.4 -3.88291 | opp_overlap 936390 936389, overlap 936409 CGACGGCAAAGCCAT CGTGTCGGCCGGGCCGGT GTCC GCCGGCCTGGAGGATGTG TTTGTGGCCATGGTG Dole_0808 935545 - 936492 + | ABC transporter-related protein TERM 1546 936531 - 936505 - g 81 -4.2 -5.1417 | overlap 936507 TGACAAAAGCAAAAA TACCGACCGGCA GAC CGCCGGCCAGGG GCCCCACGCGGTGAC TERM 1547 936529 - 936507 - g 88 -11.2 -4.17748 | overlap 936505 ACAAAAGCAAAAATA CCGACCGGCA GAC CGCCGGCCAG GGGCCCCACGCGGTG Dole_0809 936479 - 937252 + | ABC transporter-related protein TERM 1548 938276 - 938302 + G 78 -4.2 -4.99043 | overlap 938256 938279 CGGACCTGTGGCCGT CGGCCCTGGCCA TGG TGGCCGTGGGGG TTTTGTTTATCACCA Dole_0810 937249 - 938349 + | ABC-2 type transporter TERM 1549 938437 - 938423 - f 71 -2.9 -4.89339 | AAGGATGGACAAAAA GTTTT TTCGT AAAAC CGCGGCGGCCAATGG TERM 1550 939407 - 939434 + G 73 -3.4 -4.79223 | gap 1, overlap 939401 939430 CACCCTGGTGGAGAC CCAGCAG-CAGGC CCT GTTTGTCTCCTGG TTTTTCCTGGTCTCC Dole_0811 938544 - 939677 + | ABC-2 type transporter TERM 1551 940142 - 940116 - g 100 -18.2 -4.82333 | AGAAGAATGTAAAAA CTTGAGGTCACA AAT TGTGACCTCAAG TTGGGGTGGTAGTCG Dole_0812 939922 - 940482 + | hypothetical protein TERM 1552 940516 - 940542 + T 74 -6.5 -4.40561 | overlap 940507 940511 940518 CCGGGGAGGGTAGCC CATGTCTCAGC CCTGT GCTGAGGCGGG TTATTTTTCCGACCG Dole_0813 940848 - 940543 - | hypothetical protein Dole_0814 942034 - 940835 - | hypothetical protein TERM 1553 941819 - 941799 - G 100 -14.1 -4.46926 | CAGCTTACCAGAAAA TCCCGATCA AGA TGATCGGGA TCGGTGAGGGTAAAA Dole_0815 942839 - 942027 - | ORF H1617 TERM 1554 942158 - 942178 + g 80 -4.7 -5.00616 | gap 1, overlap 942161 GGCACTGCGCAATGG CAGGCGCC TGTTCC GGCGC-TG TTTTTTCAAGCAGAA TERM 1555 942161 - 942176 + g 71 -7.5 -4.13561 | overlap 942158 ACTGCGCAATGGCAG GCGCC TGTTCC GGCGC TGTTTTTTCAAGCAG Dole_0816 943899 - 943234 - | TetR family transcriptional regulator Dole_0817 944217 - 944981 + | acetoacetate decarboxylase TERM 1556 945629 - 945643 + G 71 -11.4 -3.30243 | opp_overlap 945628, overlap 945614 TCCATGGGAATGCAC GGCCAG ATG CTGGCC TTCTGCCCCCTGGAT TERM 1557 945920 - 945904 - g 75 -5.7 -4.68724 | overlap 945907 GTACGCAAGAGAAAA CAGCGGC ACG GCCGGCG CGTCCATTAAAGAGG TERM 1558 946107 - 946117 + G 72 -4.6 -4.61231 | opp_overlap 946083, overlap 946094 CCCTTGCGGCCAAAG GGCT TCA GGCC TTTTTCAGAATGTAC TERM 1559 946213 - 946203 - g 71 -8.2 -4.08767 | GCGACCGCGTCAAAA CCCG CTA CGGG ACGGGCAAGTACGGG Dole_0818 945002 - 946414 + | acyl-CoA dehydrogenase domain-containing protein Dole_0819 946436 - 947671 + | acyl-CoA dehydrogenase domain-containing protein TERM 1560 948014 - 947981 - T 80 -7.3 -4.65895 | GGGCGTATCGAAAAA CCCGGGCCGACAC CCCGGTCC GCGCCAGCCCCGG TGACTGCTATGATGG TERM 1561 948220 - 948206 - T 71 -6.4 -4.16937 | opp_overlap 948206 ATTAAAGAATAATAA CAAGAG GAC CTCTCG TTCTGACTTTACTTG Dole_0820 949275 - 948229 - | hypothetical protein TERM 1562 948647 - 948659 + g 73 -3.4 -4.77757 | TAAAGATCTCTATCA TGCA TTTCT TGCA TTTTGGTTTTTGAGA TERM 1563 948809 - 948819 + g 70 -4 -4.58395 | AGGGCAACGGCTATT TTGT GGC ACAA TTTTTGGGGGCTGCG Dole_0821 950749 - 949994 - | DNA adenine methylase TERM 1564 950909 - 950920 + r 81 -5.8 -4.96028 | CCGGGGTGTGTGTTT TCCC CCTT GGGA TTCTTTTTTTTAAGC Dole_0822 952765 - 951032 - | restriction modification system DNA specificity subunit TERM 1565 951689 - 951709 + g 90 -4.6 -5.38958 | TTGATTTTTTATTTT GCCGGCTT TGATC AGGCGGGC TTTTTCTTTGTCGAT Dole_0823 954243 - 952762 - | N-6 DNA methylase TERM 1566 952793 - 952803 + g 71 -6.8 -4.23723 | TTTGTGAGGGCATCG GCCA GGA TGGC TTTTAGCTGATCTTG TERM 1567 952837 - 952863 + g 75 -5.8 -4.59773 | overlap 952838 GTCCGCAATCTCTTT TTGCTGGGCC TGGTATT GGGCCAGCAG TTTTTGGGGGTCACG TERM 1568 952893 - 952903 + g 70 -2.4 -4.8048 | GATCTTCCTGTTCGG CCAC ATG GGGG TTTTTAATATCCAAA TERM 1569 953282 - 953267 - G 95 -6.8 -5.4505 | overlap 953268 TCGCCGAACAAAAAA CCGTCC GGCA GGACGA TAGCGGCCCGGCCGC TERM 1570 953284 - 953298 + g 95 -7 -5.4477 | opp_overlap 953285, overlap 953285 GTCCGGCAGGACGAT AGCGGC CCG GCCGCC TTTTTTTAAGAGTTT TERM 1571 953285 - 953297 + g 77 -10.5 -3.85235 | opp_overlap 953285, overlap 953284 TCCGGCAGGACGATA GCGGC CCG GCCGC CTTTTTTTAAGAGTT TERM 1572 953802 - 953820 + g 73 -3.1 -4.74706 | TCTGCTCGTAGATGT GACCG AAGGTGTGG CGGTC TTTTTGGGTGTTAAA TERM 1573 954020 - 954002 - G 70 -4.4 -4.42386 | overlap 954003 TGGGCATTGACAAAA TCGGCCAG TTC CTCGCCGG TCATGCCTTCAGGGT TERM 1574 954160 - 954142 - G 80 -4.5 -4.87893 | overlap 954145 AATTTTAAGGAAAAA CATCCAG ACCAA CTGGCTG ATGCGCTGGGCGTCG Dole_0824 956591 - 954240 - | EcoEI R domain-containing protein TERM 1575 954469 - 954483 + g 81 -2.8 -5.2166 | overlap 954453 954448 TGCTCGCCATATTTG GTGAAG TAG TTTCGC TTTTTTACATTGTTG Dole_0825 957524 - 956619 - | hypothetical protein TERM 1576 957461 - 957448 - G 83 -8.1 -4.56775 | opp_overlap 957451, overlap 957450 ATTCTTTGGGAAAAA GCCCA TGCC TGGGC AGCATGATTATTGAC TERM 1577 957658 - 957671 + H 71 -3.8 -4.7078 | AGTGCCATTTATATC CCCT TTGTGT AGGG TTTTTAGGTGATTGA TERM 1578 958398 - 958433 + G 86 -4.6 -5.24129 | TATACCCGTATCGCG CCCCGTCTTTATTCGG GGTT CCGGAGAGAAAAGGGG TTTTTTATCGCAACG TERM 1579 958469 - 958458 - g 70 -3.6 -4.59853 | GCAACGCCCGAAAAA GCCC TGGT GGAC GCTTTTTACCTGATG TERM 1580 958593 - 958582 - g 74 -2.2 -5.00884 | ATTTTCCCGAAAAAA CCAG AAAA CTGA TGAGGACCCATGGAT Dole_0826 958032 - 958616 + | hypothetical protein TERM 1581 958791 - 958807 + G 73 -12.3 -3.09491 | GAAGGCCTATTCCCG GCAGGTC CAG GACCTGC TTCAATCGGTATATG TERM 1582 959217 - 959232 + G 83 -7.6 -4.56597 | GCGCGCCTATTATGC GGCAAA CGGG TTTGCC TTTTTGAAAGAAAGG Dole_0827 958603 - 959265 + | hypothetical protein TERM 1583 959622 - 959594 - g 85 -2.9 -5.38951 | opp_overlap 959597, overlap 959597 AATTCATACAAAAAA CATGACGCGTACG CAC CGGGAGCGTCTTG CTAAAAACGGGTTTA Dole_0828 959505 - 961034 + | filamentation induced by cAMP protein Fic Dole_0829 962438 - 961200 - | ATPase protein TERM 1584 962746 - 962773 + H 71 -8.4 -3.76815 | gap 1 TGGACAAGATTGCTT CGCCTGCGC-TCG CAA TGACGGGCAGGCG TTTGGGCTTTTCCCT TERM 1585 963318 - 963334 + G 78 -9.3 -3.95621 | overlap 963310 963320 TGTTCGCTGCCCGGA CCGGACG GCC CGACCGG TTTCTGGCCTTTCAT Dole_0830 962918 - 963787 + | 3-hydroxybutyryl-CoA dehydrogenase Dole_0831 965631 - 963910 - | pyridoxal-dependent decarboxylase TERM 1586 965503 - 965544 + g 74 -13 -2.92018 | gap 1, opp_overlap 965497 965496, overlap 965505 965517 GATGAAAACCCGCAT CAGGGC-GTTCCAGTCCGC GATCA GCGGCCTGGAGCCGGCCTG TGTGGTTGCGGTATT TERM 1587 965854 - 965888 + H 83 -7 -4.66163 | opp_overlap 965846 965845, overlap 965856 AGATAAGGGCCGCTT TACGCAGCCGGCGGAG GTC TTTTGCGGGCCGCGTG TTTTTACATGGGGGT TERM 1588 966278 - 966254 - g 83 -7.7 -4.57073 | GATCTTTGGCAAAAA CCCTGGACGCC ATC GAGGGCCAGGG GCTGAACATTGAGTA TERM 1589 966309 - 966337 + G 74 -6 -4.44277 | gap 1, opp_overlap 966316 CCTGTATGCCATTAT CCGGAAACCGGGT GAAT ACGCGGTT-CTGG TTTTCCGTTTTGATG Dole_0832 965986 - 966429 + | amino acid-binding ACT domain-containing protein TERM 1590 967499 - 967483 - g 78 -6.5 -4.57341 | overlap 967470 AAGGCGCTGGAAAAA GCCGG CGACGAT CCGGC CAAAATTCGTGACAC Dole_0833 966496 - 967647 + | extracellular ligand-binding receptor TERM 1591 967669 - 967694 + F 100 -20.5 -5.37593 | ATACGGATGATGTAT GCGTGGGGGGA GACT TCCCCCCACGC TTTTTTAGTTTCCGC TERM 1592 968482 - 968441 - g 71 -7.2 -4.12188 | gap 1, overlap 968442 968444 CCATGACCGGTAAAA GCATGCGGGCCTGCGCC ATCAACCGG GACGC-GGCCCGCCTGG CCGGGATCAACGACC TERM 1593 968770 - 968785 + G 80 -10.4 -4.07568 | CTGATTGTCCTGTTT GTCCGC CCCA GCGGAC TTTTCGGCAACCGGG Dole_0834 967924 - 968826 + | inner-membrane translocator TERM 1594 969560 - 969571 + G 84 -3.6 -5.19879 | AACTATGTGCTCAAA TCGG ACAC CCGG TTTTTCTATTTCACC Dole_0835 969101 - 970108 + | inner-membrane translocator Dole_0836 970105 - 970866 + | ABC transporter-related protein TERM 1595 971145 - 971177 + G 70 -3.9 -4.57569 | opp_overlap 971121, overlap 971138 971137 GCATTGCCCAGGTGC CGGAAGGGCGCCAGA TCT TCTGGCCCATGACCG TTTTTGAAAACCTGG Dole_0837 970901 - 971638 + | ABC transporter-related protein TERM 1596 971694 - 971718 + F 70 -10 -3.17714 | overlap 971697 CGCATCCCTCGTCAC TGCGGCGTAC GACAG GTACGCCTCA TTCCTCGGGATTTGC TERM 1597 971697 - 971715 + F 71 -10.3 -2.78395 | overlap 971694 ATCCCTCGTCACTGC GGCGTAC GACAG GTACGCC TCATTCCTCGGGATT TERM 1598 971844 - 971828 - f 81 -8 -4.58395 | TTTATGTCGGAAAAA CCGCAT GGAAT ATGCGG GGTGGTGTAATATAT TERM 1599 971903 - 971891 - f 75 -6.2 -4.56775 | ACGTGCCTGTAAAAA CCGG AGGGA CCGG ATGAGCAATTTCTGG TERM 1600 972251 - 972261 + G 74 -8.2 -4.2123 | CTGGGGCATGCTCAT GGCC AGG GGCC TTTCTTCCGTGGGTG Dole_0838 971904 - 973199 + | phenylacetate--CoA ligase TERM 1601 973532 - 973507 - g 85 -10.3 -4.26076 | opp_overlap 973502 GTACTGTCATGAAAA CGCCCATGGCC GGCA GGCCGTGGCCG ATGCCTATGATCCAT Dole_0839 973247 - 973633 + | HNH endonuclease TERM 1602 973731 - 973716 - g 80 -4.6 -4.95547 | overlap 973717 973720 CGCAGAAGAACAAAA TCCAGG CAGA CCTGGC GGCCCGCGTCGCGCT TERM 1603 973930 - 973900 - g 83 -5.9 -4.95484 | overlap 973916 GAGCACCAAAGAAAA GGCGGCGGCCGGC AAACA GCCCAAGGCCGCC AAAAAAGTTGAAGAC Dole_0840 973670 - 973999 + | hypothetical protein TERM 1604 974002 - 973981 - f 100 -6.5 -5.58051 | overlap 973985 973987 AAAGAAAAAAGAAAA GAAACAGGC GGAA GCCTGATCC GGTATTGCCGGCGGC TERM 1605 973998 - 973985 - f 90 -8.1 -5.1285 | overlap 973981 973987 AAAAAAGAAAAGAAA CAGGC GGAA GCCTG ATCCGGTATTGCCGG TERM 1606 974013 - 974036 + F 100 -21 -4.44667 | opp_overlap 973987 GATCCGGTATTGCCG GCGGCCCGGC TCTC GCCGGGCCGC TTTCTTCTTGACAAA TERM 1607 974170 - 974133 - f 83 -8.5 -4.57341 | opp_overlap 974140 974168, overlap 974139 974140 AATTCGGCTGAAAAA GTAAAAGGGAGGCAG GCACAGAT CTGCCTCCTTTTTTC ATGGTGAACGTTTGT TERM 1608 974164 - 974139 - f 78 -6.1 -4.77757 | opp_overlap 974140, overlap 974133 974140 GCTGAAAAAGTAAAA GGGAGGCAG GCACAGAT CTGCCTCCT TTTTTCATGGTGAAC TERM 1609 974140 - 974163 + F 100 -10.3 -5.1861 | opp_overlap 974139 974133 974140 CTGAAAAAGTAAAAG GGAGGCAGG CACAGA TCTGCCTCC TTTTTTCATGGTGAA TERM 1610 974163 - 974140 - f 74 -9.6 -3.4557 | opp_overlap 974140, overlap 974139 974133 CTGAAAAAGTAAAAG GGAGGCAG GCACAGAT CTGCCTCC TTTTTTCATGGTGAA Dole_0841 974401 - 975000 + | redoxin domain-containing protein TERM 1611 974991 - 975007 + F 81 -7.9 -4.52589 | overlap 974992 GTGCGATGACGGCCG GTCCGGG TAG CCCGGAG TTTTATCTGGAAACC TERM 1612 974992 - 975006 + F 82 -11.4 -3.31232 | overlap 974991 TGCGATGACGGCCGG TCCGGG TAG CCCGGA GTTTTATCTGGAAAC TERM 1613 975063 - 975050 - f 73 -2.3 -5.1417 | opp_overlap 975052, overlap 975052 GTATAAAATTAAAAA GAGGC CCTG ACCCC CCGGCCTTTTCCCAG TERM 1614 982273 - 982250 - g 70 -2.4 -4.75219 | overlap 982272 GAACCATCAACAAAA CCCTGTCATA TACC TATAACGAGG ACTTCAACGTAGAGT Dole_0842 975316 - 983811 + | YD repeat-containing protein Dole_0843 983824 - 984141 + | hypothetical protein TERM 1615 984870 - 984888 + G 70 -3.7 -4.56597 | overlap 984871 TGGGAAGCAGTCCGC TCCCAGC GCAAG GCAGGGG TTTTTCAGAAAAGCG Dole_0844 984246 - 985268 + | hypothetical protein Dole_0845 985606 - 986736 + | molybdopterin oxidoreductase Fe4S4 region TERM 1616 987937 - 987951 + G 71 -10 -3.59979 | CCGGGTACGCCGGTG CTGCAC ACG GTGCAG TTTCCCATCGGCAAG Dole_0846 986785 - 988368 + | molybdopterin oxidoreductase TERM 1617 988391 - 988430 + T 100 -23.8 -4.08706 | gap 1, opp_overlap 988391 988396, overlap 988396 GGCTTAACGATAGAA CAGGA-CGGGCCATTCGCC ATC GGCGAATGGCCCGCTTCTG TTTATGTCATCACAA TERM 1618 988430 - 988391 - T 100 -21.6 -3.59946 | gap 1, opp_overlap 988391 988396, overlap 988396 GGCTTAACGATAGAA CAGGA-CGGGCCATTCGCC ATC GGCGAATGGCCCGCTTCTG TTTATGTCATCACAA TERM 1619 988396 - 988424 + T 100 -24.7 -2.95522 | opp_overlap 988391 988396, overlap 988391 AACGATAGAACAGGA CGGGCCATTCGCC ATC GGCGAATGGCCCG CTTCTGTTTATGTCA TERM 1620 988424 - 988396 - T 100 -24.7 -2.84365 | opp_overlap 988396 988391, overlap 988391 AACGATAGAACAGGA CGGGCCATTCGCC ATC GGCGAATGGCCCG CTTCTGTTTATGTCA Dole_0847 990656 - 988602 - | alpha amylase all-beta TERM 1621 990490 - 990508 + g 90 -7.4 -5.055 | overlap 990482 990482 ATGTCGGCCAGCCGG CCCTGG GGACCGG CCAGGG TTTTTTCAAGATTCA Dole_0848 992201 - 990681 - | starch synthase catalytic subunit TERM 1622 991661 - 991637 - G 84 -2.7 -5.40072 | overlap 991640 GCCGCGTGAAAAAAA GATGGCGCC AGAAAGA GGCGGCGTC AATGCCCCGGTCTTC TERM 1623 991666 - 991691 + g 85 -3.1 -5.45726 | gap 1, overlap 991666 GAGGCGGCGTCAATG CCCC-GGTCTTC AAT GTCGGCCAGGGG TTTTTTTACGGTGTA TERM 1624 991923 - 991908 - G 76 -3.2 -4.87665 | overlap 991910 GTTCATGTAGAAAAA GGCC CGGTCTTC GGCC AGGTGAATGCGCTCC TERM 1625 991928 - 991950 + g 75 -4 -4.86773 | GGTCTTCGGCCAGGT GAATGCGCTC CTG GGGCACCTTC TTTTTGATGGTTTTA TERM 1626 992218 - 992273 + r 90 -2.6 -5.79595 | opp_overlap 992229 992230, overlap 992266 CGTTGTTACCTGTAC CTTTATTGAAATCGGTATCGCTATCG ATAT CGGTATCGGTATCGAAATTAAGAAGG TTTTTTATTTTAAAA Dole_0849 995005 - 992453 - | alpha-glucan phosphorylase TERM 1627 994049 - 994091 + g 79 -12.7 -3.2794 | AAATTCGTCGTGGCC CGCCGGCACCGGCGTGT GGGTGGTAA ACACGGTGGTGCGGGCG TTGATCTCGATGGCG Dole_0850 995338 - 995030 - | glycoside hydrolase family protein Dole_0851 1000151 - 995850 - | Amylo-alpha-16-glucosidase TERM 1628 996881 - 996855 - G 71 -10.1 -3.53012 | GCCGCGCTCTTCAAA CCGGCCGAACT GCTTT AGTACGGCCAG GGCCTCAGGGATCAT TERM 1629 997892 - 997880 - G 73 -3.3 -4.82901 | overlap 997884 TGTCGCGCAGAAAAA GCAGG TGC CCTTC GGCATGGCGGTTTTC TERM 1630 999895 - 999885 - G 74 -8.2 -4.18494 | CAGCGTGATGGAAAA CCGG GTG CCGG TCTCCCTGGTCATGG TERM 1631 1000568 - 1000542 - R 100 -13.1 -3.98282 | gap 1 CGGACATGAACGAAA CACGGG-CAAGC TGGC GCTTGGCCCGTG GCACCCATCAAAAGT TERM 1632 1000744 - 1000766 + r 80 -8.4 -4.43571 | overlap 1000747 CTGCTTGCGCGAGGG CAGTCACGCC TGC GGCGTGATTC TTTTGGTACTTTTCT TERM 1633 1000747 - 1000763 + r 95 -12.3 -4.29953 | overlap 1000744 CTTGCGCGAGGGCAG TCACGCC TGC GGCGTGA TTCTTTTGGTACTTT Dole_0852 1001876 - 1000806 - | type IV pilus assembly PilZ TERM 1634 1001093 - 1001070 - G 72 -6 -4.30014 | TTGACCAACGGAAAA GCGCTTTTTG GTTT CAATAAACGC ACCCCCCACACTGAT TERM 1635 1001689 - 1001699 + g 70 -4 -4.57569 | TCGTTTGTTTCCTGC GTTA TGA TAAC TTTTTGACCGGCTGC Dole_0853 1002591 - 1002106 - | hypothetical protein TERM 1636 1002312 - 1002328 + g 84 -3.6 -5.26119 | overlap 1002309 GCGCGTGGATCACCA GGGCCG AGGCA TGGTCC TTTTCTTTTTCAAAC Dole_0854 1003547 - 1002588 - | alpha/beta hydrolase domain-containing protein TERM 1637 1002736 - 1002746 + g 85 -2.4 -5.5074 | overlap 1002733 AAGATTTTCACTCCG GCGG CCT CGGC TTTTTTCTTGAGTTC TERM 1638 1002976 - 1003019 + g 75 -5.9 -4.66537 | gap 1, opp_overlap 1002983 1002986 GTGATGTCCAGCCAG GGCGAAAG-CAGCACCAGCC GGGAG GGCGGGGGCAGGTTTTCGTC TTTTATCTTCAGGGC TERM 1639 1003360 - 1003388 + g 80 -2.3 -5.24129 | ATCTCTTTCAGCAAG CATCCTTTTACCT GAC GGGGAGACGGGTG TTTTTTGTCCCGCAG Dole_0855 1005568 - 1003544 - | sodium/hydrogen exchanger TERM 1640 1003684 - 1003700 + g 100 -12.3 -5.0538 | opp_overlap 1003693 TGTCAGCGCCGGGGT TGGCCAG AAT CTGGCCA TTTTTTGAAATGGCG TERM 1641 1003760 - 1003734 - G 78 -8.7 -4.1721 | gap 1, opp_overlap 1003744, overlap 1003724 1003737 ATGGAGACGCTAAAA CAGCGGCGCAGG TCGG CCTG-GCCGATG GACATGCTCACCAAC TERM 1642 1004593 - 1004561 - G 70 -3.9 -4.70353 | overlap 1004555 1004562 GAGAATAAAGGAAAA TTCCCCGATCTGGCC CAG GGCCAGGCCGGCCAG GATGCCGGTACGAAA TERM 1643 1004872 - 1004838 - G 72 -6.3 -4.37092 | gap 1, overlap 1004839 1004840 1004857 AGCCCGGCCAGAAAA GCGCCCAGGGCCAGGG AAAG CCCTG-CCGTGGCCGT GAGCCAGGCAATGCC TERM 1644 1005484 - 1005471 - G 78 -8.1 -4.46212 | opp_overlap 1005478 CCGGTGACCAGAAAA CCCAC CACC GTGGG CACCCGCAGTTTGTG Dole_0856 1006478 - 1005609 - | zinc transporter ZupT TERM 1645 1005870 - 1005886 + g 72 -4.4 -4.64676 | gap 1, opp_overlap 1005870, overlap 1005870 GCCGCTGACCAGAGA CC-AGGC AAAA GCCTTGG TTTTATTGCCGGTGG TERM 1646 1006424 - 1006404 - G 86 -6.7 -5.00616 | CTTTTTTGCAAAAAA GGCAATGGC GCT GCCGATGCC GGTGGCCATGCCGGC Dole_0857 1007260 - 1006928 - | hypothetical protein Dole_0858 1007772 - 1007416 - | hypothetical protein TERM 1647 1007827 - 1007809 - R 73 -2.4 -5.15167 | gap 1, overlap 1007813 CATGATGAATAAAAA CCGACTC ACGCGG GAG-CGG CGGAGAGCTATTGTA TERM 1648 1007966 - 1007992 + r 76 -8.6 -4.07687 | opp_overlap 1007967, overlap 1007967 CTGGTCCTTTAAGTC AGCGTCAAGTCC CAT GGCCTTGGCGCG TTTTACCCAGCGGCT TERM 1649 1007967 - 1007991 + r 81 -12.1 -3.04398 | opp_overlap 1007967, overlap 1007966 TGGTCCTTTAAGTCA GCGTCAAGTCC CAT GGCCTTGGCGC GTTTTACCCAGCGGC Dole_0859 1009129 - 1007945 - | CBS domain-containing protein TERM 1650 1009190 - 1009213 + H 71 -4.7 -4.56133 | TACAGACAGCCCGCC GGTTTTGAA AGGAGA TTTAAAACC TTTTGATTGTTCAGG TERM 1651 1010145 - 1010129 - g 95 -2.2 -5.84381 | overlap 1010130 1010139 CCATCAACAAAAAAA CCGG CAAGGACAC CCGG TCCCTGGTGCTGGGC Dole_0860 1009312 - 1010409 + | 6-phosphofructokinase TERM 1652 1011067 - 1011084 + G 74 -6.9 -4.36914 | overlap 1011069 CCCCTGCCCGCCCTT CACCTGG TGGA CCAGGCG TTTTATACCCGCCAC TERM 1653 1011484 - 1011517 + G 87 -16.7 -2.82516 | gap 1 CAGCGGCGCTTCAAC CGGCCC-GACGTGGGC CGT GCCCATGACCGGGCCG TGTCCTGGTGCGAAA TERM 1654 1011623 - 1011643 + G 72 -8.9 -3.79071 | overlap 1011639 TTGTTCACCTGCTGG GCCTGCCCA CCC TGGCCGGGC TTTCCGTGTTCTACC Dole_0861 1010419 - 1012104 + | cobalamin B12-binding domain-containing protein Dole_0862 1012520 - 1012068 - | hypothetical protein TERM 1655 1012175 - 1012157 - G 100 -14.6 -4.99035 | GCACCGACATAAAAA CCGGCATG CCC CATGCCGG AAGCGGAAACCGGCC Dole_0863 1012948 - 1012517 - | hypothetical protein TERM 1656 1012740 - 1012726 - G 78 -4.2 -4.95155 | overlap 1012727 CCGACATGACAAAAA GGCCAT AGG ATGGCA GCATCAGTCTCCAGT TERM 1657 1013173 - 1013150 - H 83 -2.4 -5.64006 | gap 1, overlap 1013153 ATCCAACCAAAAAAA CATTGACACCC CGG GGAGGTCA-TG CAAAAATTAGACATA TERM 1658 1013538 - 1013525 - g 91 -8.1 -5.05153 | overlap 1013501 1013500 1013527 ACTGTAAAAAACAAA CTGGC CCGG GCCAG AAAAGCACTGGACGG Dole_0864 1013300 - 1014043 + | hypothetical protein Dole_0865 1014063 - 1014344 + | hypothetical protein Dole_0866 1014399 - 1014845 + | pseudouridylate synthase-like protein TERM 1659 1014875 - 1014892 + F 80 -4.7 -5.10163 | overlap 1014865 1014871 CGGGGGGGTCTGCGC CGGGCCG TCTG TGGCGCG TTTTGTTTTCCAGTT TERM 1660 1016004 - 1015993 - g 71 -7.2 -4.18018 | overlap 1015994 GCGGGTCAGTGAAAA CGGG CGCC CCCG GCACCATCCGGCCTG TERM 1661 1017545 - 1017564 + G 71 -10 -3.5393 | opp_overlap 1017545 GCAGCCCCGGGCAAA CCGGTGAT CATG GTCACCGG TTTCGGCGACATGAT Dole_0867 1014980 - 1017697 + | PAS/PAC sensor hybrid histidine kinase Dole_0868 1017713 - 1019140 + | two component, sigma54 specific, Fis family transcriptional regulator Dole_0869 1019441 - 1019830 + | hypothetical protein TERM 1662 1019826 - 1019813 - f 74 -9.5 -3.59087 | AACAGCAGGGGCAAA GCGGC CGGC GCCGC CTGAAGAAAGGACCC Dole_0870 1019847 - 1020182 + | hypothetical protein TERM 1663 1020981 - 1020993 + G 75 -5.5 -4.57569 | overlap 1020977 1020977 GTGTTGCAACCGGGC CGGGA GGC TCCTG TTTTTGACCGACTGG TERM 1664 1021156 - 1021123 - g 80 -10.2 -4.08692 | opp_overlap 1021121 1021123 CAACGGCCGTCAAAA CCGGTCCCGGCG CTGTGCCGTC CGCCGAGGCCGG TGTTTCAGCGCCCGC TERM 1665 1022211 - 1022201 - g 70 -2.4 -4.72272 | overlap 1022203 GGCGGTTATCAAAAA CCTG GGC CGGG CCTATAAAGAGATAC Dole_0871 1020246 - 1022330 + | CheA signal transduction histidine kinase TERM 1666 1023297 - 1023309 + G 76 -3.3 -5.00884 | overlap 1023298 GTATTCTGATCGCGG TTGCC GTC GGCAC TTTTTTCGCCGGCCT TERM 1667 1023824 - 1023850 + G 88 -15 -3.62096 | opp_overlap 1023821 1023808 GCGGCCATTGAAGCG GCCCGGGCCGGC GAC GCGGGCCGGGGC TTTGCCGTGGTGGCC Dole_0872 1022327 - 1024384 + | methyl-accepting chemotaxis sensory transducer TERM 1668 1024596 - 1024606 + G 71 -6.8 -4.23892 | TTTTCAGCATACCGG CAGG CAT CCTG TTTTCAATGATTCCG TERM 1669 1025666 - 1025692 + G 88 -15 -3.62096 | opp_overlap 1025650 1025651 GCGGCCATTGAGGCG GCCCGGGCCGGC GAC GCGGGCCGGGGC TTTGCCGTGGTGGCC Dole_0873 1024430 - 1026205 + | methyl-accepting chemotaxis sensory transducer TERM 1670 1026235 - 1026217 - f 76 -11 -3.14229 | overlap 1026215 ATAGTTTTAGGAACA GTCGGCAT GTT ACGCCGAC TCGGCGGACAAAGGA Dole_0874 1026258 - 1026761 + | CheW protein TERM 1671 1026916 - 1026955 + F 85 -12.1 -3.33696 | opp_overlap 1026889, overlap 1026895 GATATGGGAGCCGCC CCCGCCCATGACCGC CGCTGAATTT GCGGCCATCGGCGGG TTCATTCAGGCGGAG TERM 1672 1027383 - 1027373 - g 72 -4.6 -4.57073 | GAGGTGGTGGAAAAA GCCC GTC AGGC CATCTACGCGGAGGC Dole_0875 1026923 - 1027738 + | MCP methyltransferase, CheR-type Dole_0876 1027755 - 1028210 + | response regulator receiver protein Dole_0877 1028207 - 1028767 + | hypothetical protein TERM 1673 1029054 - 1029032 - g 84 -2 -5.47218 | gap 2, overlap 1029033 1029034 GTTGACCGAAAAAAA CTCGGCCCTG GCGGT CAGGGC-G-G TCGAGCAGGGGGCCG TERM 1674 1029819 - 1029848 + G 74 -7.1 -4.38712 | GACAACGTGCTCCCC CTGGATCGTATCG CCGG CGAAGTGATCCGG TTTTATAAAAGTACA Dole_0878 1028760 - 1029896 + | response regulator receiver modulated CheB methylesterase TERM 1675 1029918 - 1029902 - g 84 -2.1 -5.40072 | overlap 1029904 1029912 1029915 CGTGGTTTAAAAAAA GACCCGA AAC CCAGGGC AGTGACCTTGAACCG TERM 1676 1031518 - 1031528 + G 83 -5.4 -5.00884 | GTTGATACGACCCTT TCCA GCC TGGA TTTTTTCCAGGGGCT Dole_0879 1029874 - 1031775 + | methyl-accepting chemotaxis sensory transducer TERM 1677 1031811 - 1031834 + F 71 -10.2 -2.78384 | gap 1, opp_overlap 1031808 TTGGTTTAAGGATGA CGC-GCCGGGC CGG GCCCGGCTGCA TGTAATCACAGAGGA TERM 1678 1032161 - 1032134 - g 78 -3.2 -5.05782 | overlap 1032137 ATGGAGGCCAAAAAA CAGGAGGGCCGG GCCG CCGGGGCTACCG GATGGATCACCAAAC Dole_0880 1031861 - 1032232 + | response regulator receiver protein TERM 1679 1033229 - 1033180 - g 74 -2.7 -4.87807 | gap 1, overlap 1033181 1033188 1033189 1033227 GGAACACACCAAAAA CGCGACAATCCTGGGACT-GGCCA AGC TGGCCGAGTCCAGGGACGACAGCA CCGGCCGGCACCTGG Dole_0881 1032236 - 1033849 + | putative PAS/PAC sensor protein Dole_0882 1033904 - 1034458 + | hypothetical protein TERM 1680 1034686 - 1034674 - g 72 -4.7 -4.62069 | overlap 1034676 CCTTCAGCGGAAAAA CCGGC ACC GGCGG CGGCATCCAAACCCC Dole_0883 1034482 - 1034985 + | type IV pilus assembly PilZ TERM 1681 1035027 - 1035055 + T 100 -12.4 -5.86061 | opp_overlap 1035025, overlap 1035028 GCCGCGTAAATTATC CGGGCAACCCGC TGACT GTGGGTTGCCCC TTTTTTTTCGTCCAA TERM 1682 1035028 - 1035054 + T 100 -15.9 -4.10552 | opp_overlap 1035025, overlap 1035027 CCGCGTAAATTATCC GGGCAACCCGC TGACT GTGGGTTGCCC CTTTTTTTTCGTCCA Dole_0884 1036616 - 1035339 - | response regulator receiver protein TERM 1683 1035742 - 1035772 + g 71 -8.1 -4.07568 | overlap 1035743 GCCACGGCAACGTTC ACGGCGGCGGCGC CCAGT GCCCCGTTGCCGG TTTTCCACAGGCCCG TERM 1684 1036223 - 1036233 + g 100 -8.2 -5.7946 | opp_overlap 1036222 1036223 TGATTTTTTCAAAAC GGCC GAT GGCC TTTTTTTCTTCGGAA Dole_0885 1037248 - 1036631 - | response regulator receiver protein TERM 1685 1036802 - 1036816 + g 76 -3.4 -5.01732 | opp_overlap 1036787 CCGCCCGGCAAACCC GGCGTC AGC GGCCCC TTTTTTCAGGACCTT Dole_0886 1037889 - 1037266 - | response regulator receiver protein Dole_0887 1038250 - 1037861 - | response regulator receiver protein Dole_0888 1040190 - 1038247 - | histidine kinase TERM 1686 1038304 - 1038292 - G 78 -9.1 -4.15698 | CAGCCAGATAAAGAA GGTGG AGC CCACC CCCACCTCGCTCTGT TERM 1687 1039216 - 1039201 - G 90 -6.2 -5.31275 | opp_overlap 1039201 GGCCAGCAGAAAAAA GAAGAA AATT TTCTTC TGGACCCCCGTATAG TERM 1688 1039960 - 1039945 - G 81 -4 -5.03314 | gap 1, overlap 1039946 GTCATGTTCAAAAAA GGCGGTT CTG AACC-CC GATCCCAGGGAGGTG TERM 1689 1040233 - 1040210 - R 71 -3.8 -4.72272 | TGCCTCCATGAAAAA GCGGTGTC TGGCCTGG GACACTGC AAATTGTTTGCCAGA TERM 1690 1040380 - 1040390 + r 83 -8.2 -4.57569 | AAAAACAGACAGGGG CGGC CGG GCCG TTTTTGCCAAAGTGC Dole_0889 1040893 - 1040444 - | hypothetical protein TERM 1691 1040741 - 1040767 + g 76 -13 -3.12351 | opp_overlap 1040731 1040735 AATCACAACCGCGCT TCGGCCGTCGGT ATA AATGACGGCCGA TTCGGTGTACGAGAA TERM 1692 1041000 - 1041011 + r 85 -7.2 -5.00616 | CCGGCAGGGTCCGGA CCGG GCAG CCGG TTTTTTGCGGAAGGA Dole_0890 1042591 - 1040978 - | radical SAM domain-containing protein TERM 1693 1041124 - 1041149 + g 73 -11.7 -3.1372 | opp_overlap 1041106, overlap 1041122 ACCGTACGGGGCATC CCCGGCAGGCG GCGG CGCCGGCCCGG TATTGCTCGGCCGTC TERM 1694 1042217 - 1042230 + g 74 -8.1 -4.13767 | overlap 1042213 CGTAGCCGGTCGCGC CAGGG GCTT CCCTG TTTTCGGGTCGACCC TERM 1695 1042950 - 1042934 - H 73 -3.6 -4.87665 | opp_overlap 1042934 1042936, overlap 1042936 CTTGACGCACAAAAA TTCCCG GAAAA CGGGTA ATTGGATATTTGAAT TERM 1696 1043172 - 1043186 + H 71 -4.2 -4.77036 | opp_overlap 1043159, overlap 1043173 AACAGAGCTACGCCC CGGTTT TTT AACCCG TTTTTACTGATCAAG TERM 1697 1043767 - 1043753 - g 87 -9.2 -4.59773 | CGCGAGCGTGAAAAA CCCGGC ATT ACCGGG GTGGAGGCGTTGAAG TERM 1698 1043906 - 1043922 + G 75 -3.6 -4.71828 | overlap 1043907 CTGCTGGGCGGCAGC GCCACC GATGA GGTGGA TTTTGTTCGTGACAT Dole_0891 1043210 - 1044331 + | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 1699 1044565 - 1044527 - g 77 -8.2 -4.371 | gap 1, overlap 1044505 TGGATTACACCAAAA TGGCGGCC-ACCTGG ATCATGAACG CCAAGCGGGCCGCCA AAGAAGGCAAAAAGG Dole_0892 1044328 - 1045773 + | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 1700 1045783 - 1045765 - f 80 -7.4 -4.56597 | CGGGCTTCGGAAAAA GACGGATG ACC CACCCATC GAAGAAAGATCAGAC TERM 1701 1046198 - 1046184 - g 76 -3.4 -4.90266 | opp_overlap 1046189 1046190, overlap 1046185 GTCATGAATGAAAAA TGCGCC GCC GGCACC GGCCATTTTCTGGAA TERM 1702 1046371 - 1046361 - g 74 -2.4 -5.00616 | GGGGTGCCCAAAAAA GAGG TGG CCGC CGGGATCAACAAGGC Dole_0893 1045770 - 1046591 + | putative CoA-substrate-specific enzyme activase Dole_0894 1046588 - 1047358 + | putative CoA-substrate-specific enzyme activase TERM 1703 1047358 - 1047368 + F 70 -2.4 -4.99043 | GGCCGATTACCACTA GCCC AAA GCGC TTTTCTTTGTAAAAA Dole_0895 1047425 - 1047739 + | XRE family transcriptional regulator TERM 1704 1048965 - 1048934 - g 77 -13.9 -2.90723 | gap 1, overlap 1048937 GCATCGGGAAGGATA TCA-TGCGGCGTAC TTGTC GTACGCCGCAGTGA CGAGGGGTGCAGCGC TERM 1705 1048961 - 1048937 - g 84 -15.8 -2.69964 | overlap 1048934 TCGGGAAGGATATCA TGCGGCGTAC TTGTC GTACGCCGCA GTGACGAGGGGTGCA Dole_0896 1047736 - 1048965 + | HipA domain-containing protein TERM 1706 1049434 - 1049444 + G 77 -8.2 -4.4017 | GACTTCCGGATCATG GCCG AAT CGGC TTTTATGCGGGTTCC Dole_0897 1049047 - 1049844 + | enoyl-CoA hydratase/isomerase Dole_0898 1050221 - 1049841 - | hypothetical protein Dole_0899 1050289 - 1051089 + | hypothetical protein Dole_0900 1051153 - 1051983 + | hypothetical protein TERM 1707 1051992 - 1052040 + F 71 -8.9 -3.50447 | gap 2, opp_overlap 1052018 TTCTTAATGTCTAAC CTCGCTGGTGCAGGGGACGGC CAAAAGCGC GCCG-CCCCTG-ACCAGCCCG TTATGTGAAAATTGA Dole_0901 1052085 - 1054103 + | ATP-dependent OLD family endonuclease Dole_0902 1054221 - 1055351 + | hypothetical protein TERM 1708 1055989 - 1055973 - g 85 -10.9 -4.08216 | opp_overlap 1055973, overlap 1055985 GTACCTGGTGGAAAA GCAGCAT CAA ATGCTGC TGTTCAGCGACGAGG Dole_0903 1055437 - 1056084 + | type III restriction system methylase TERM 1709 1056417 - 1056405 - g 80 -10.5 -4.09243 | opp_overlap 1056405 TATATTGCTCTAAAA CGGCC AAC GGCCG TTATTCCGTTTGCGA TERM 1710 1056405 - 1056417 + G 75 -10.5 -3.77832 | opp_overlap 1056405 TATATTGCTCTAAAA CGGCC AAC GGCCG TTATTCCGTTTGCGA Dole_0904 1056071 - 1057615 + | site-specific DNA-methyltransferase (adenine-specific) Dole_0905 1057608 - 1060169 + | putative restriction enzyme Dole_0906 1062546 - 1060198 - | formate C-acetyltransferase TERM 1711 1060401 - 1060411 + g 72 -4.6 -4.57569 | opp_overlap 1060400 1060390 1060389 1060387 AGACCCGGAAAATAC TGCC CAG GGCG TTTTTGCCGGCATCA TERM 1712 1060741 - 1060761 + g 79 -6.9 -4.56597 | GGTCCACCGGTCTGC TTCGGCA TGATCGT TGCCGAA TTTTTCAAGGCGGCG TERM 1713 1061868 - 1061881 + g 75 -5.9 -4.67168 | overlap 1061853 1061875 GGTCGGCCTTTCGGA CGGGG TCGG CCTCG TTTTTGGCCATTTTT TERM 1714 1061987 - 1061969 - G 79 -5.8 -4.82901 | overlap 1061970 GCCGCCTGATAAAAA TCGCGCTG CTC CGGCGCGG TGGCTGCCTGCTCAT TERM 1715 1062606 - 1062621 + r 73 -4.6 -4.82128 | overlap 1062595 CAGGAGGTGCTTCCG GCACCG GTTT CGATGC TTTTCTGTTTAATCC Dole_0907 1063078 - 1062590 - | TPR repeat-containing protein TERM 1716 1062807 - 1062765 - GR 77 -2.5 -5.0916 | opp_overlap 1062768, overlap 1062767 1062768 TCGGCAAGATAAAAA TAGGCCGGCCCGTCGGC CGGGTTGAT GCCCACGGCCCGCTCCA GTGTCCGGATGGCCC TERM 1717 1062782 - 1062767 - GR 73 -7.5 -4.17211 | opp_overlap 1062768, overlap 1062765 1062768 GGCAAGATAAAAATA GGCCG GCCCGT CGGCC GGGTTGATGCCCACG Dole_0908 1065353 - 1063053 - | 1A family penicillin-binding protein TERM 1718 1063417 - 1063456 + gH 76 -7.1 -4.42464 | overlap 1063419 1063454 TCTTTGTAATCGTTG GTGGTGCCGGTTTTGCC GGCCAG GGAAAAATCGACACCCC TTTCTTTCAGGGATT TERM 1719 1065319 - 1065332 + gH 83 -5.3 -5.00616 | ACCAGAAGAACGCCG CTGAT GAGG ATCAG TTTTTTAAGCAGGGA TERM 1720 1066368 - 1066346 - gH 80 -9 -4.2349 | CCGGGATATTGAAAA GGCCGCCGCC CTG GGCAATGGCC GGGCCGTCAAATGGC Dole_0909 1065504 - 1066415 + | TPR repeat-containing protein TERM 1721 1066509 - 1066559 + GF 70 -2.5 -4.8622 | gap 3, overlap 1066510 1066511 CGGGCTTTTGCGCCG ATGCCCCGGCATGGGGCATCCAGG CCGAAC CCTGG---CCCGAAGCCGGGGCGA TTTTTCATTCAGACC TERM 1722 1066823 - 1066833 + GF 71 -8.2 -3.73042 | overlap 1066821 GATACCTGGTACTGG CCCG CCT CGGG TATTTTGCTGGGCAA Dole_0910 1066379 - 1067554 + | hypothetical protein Dole_0911 1067569 - 1068120 + | tellurite resistance protein TehB Dole_0912 1068136 - 1068552 + | thioesterase superfamily protein Dole_0913 1068718 - 1069623 + | response regulator receiver protein TERM 1723 1070787 - 1070801 + G 84 -7 -4.82901 | overlap 1070788 CCCCGCGCCCCTCAC AGCGGC CTT GCCGCA TTTTTATAAAGCACC TERM 1724 1070788 - 1070800 + G 71 -10.5 -3.49419 | overlap 1070787 CCCGCGCCCCTCACA GCGGC CTT GCCGC ATTTTTATAAAGCAC Dole_0914 1070458 - 1070853 + | hypothetical protein TERM 1725 1070906 - 1070893 - f 73 -9.5 -3.4178 | overlap 1070882 AGCACGTCATCATAA CGCCG GTAC CGGCG GCAGAGGATTTTTCT TERM 1726 1071183 - 1071193 + G 72 -4.6 -4.58395 | overlap 1071173 GTCCTGATCGTTCTG CTGG CCG CCGG TTTTTACCGGGTGAA Dole_0915 1071045 - 1071620 + | membrane protein-like protein TERM 1727 1072650 - 1072640 - g 77 -2.4 -5.08824 | overlap 1072643 CTGTTAGCGAAAAAA GAGG CGG CCAC GGTTCTGCTGAACCC Dole_0916 1071623 - 1072780 + | hypothetical protein TERM 1728 1073059 - 1073041 - g 76 -4.4 -4.72272 | opp_overlap 1073030, overlap 1073043 1073044 CTTTCCCAGGAAAAA CAGGCCGA TTT TCGGCGGG AGTTTCTGGGCTTCG Dole_0917 1072807 - 1073544 + | ABC transporter-related protein TERM 1729 1073574 - 1073627 + F 100 -22.5 -3.81154 | gap 1, opp_overlap 1073578 1073582, overlap 1073579 TGCAGCCCATGTAAA AAAAGGAAGGATGGCAGCGCGGGCGT AAC GCGCCCGCGCTGCCATCCC-CCTTCG TTTGATAAATCTTTT TERM 1730 1073623 - 1073578 - f 100 -29.2 -5.47218 | gap 1, opp_overlap 1073574 1073579, overlap 1073582 GCCCATGTAAAAAAA GGAAGGATGGCAGCGCGGGCG TAACG CGCCCGCGCTGCCATCCC-CC TTCGTTTGATAAATC TERM 1731 1073579 - 1073623 + F 100 -27.9 -3.57418 | opp_overlap 1073578 1073582, overlap 1073574 CCCATGTAAAAAAAG GAAGGATGGCAGCGCGGGCGT AAC GCGCCCGCGCTGCCATCCCCC TTCGTTTGATAAATC TERM 1732 1073620 - 1073582 - f 100 -31.9 -4.04789 | opp_overlap 1073579 1073574, overlap 1073578 ATGTAAAAAAAGGAA GGATGGCAGCGCGGGCG TAACG CGCCCGCGCTGCCATCC CCCTTCGTTTGATAA Dole_0918 1073924 - 1074214 + | hypothetical protein TERM 1733 1074227 - 1074215 - f 78 -9.1 -4.00486 | TGGATAACAGAATAA TCGGC GGG GCCGA ACCAAAGGGGTGCCA Dole_0919 1074430 - 1075341 + | HNH endonuclease TERM 1734 1075701 - 1075720 + G 76 -2.8 -5.02323 | overlap 1075704 GAATTAACTATTGAA GAGCAAAC TTTT GTTTGTGC TTTTGTTTCTGCTGC TERM 1735 1075791 - 1075778 - g 89 -2.3 -5.78622 | overlap 1075779 GCACTGGAAAAAAAA CTGGG AACG CCCAT TCAAAATGATGGAAG Dole_0920 1075506 - 1076369 + | hypothetical protein TERM 1736 1076427 - 1076371 - f 79 -10.4 -3.73816 | gap 1, opp_overlap 1076377, overlap 1076372 1076377 AACATCAGATTTAAA CGACAAGTATGAT-TCAGCGGAATTCC GGGC GGAATTCCGGGGACATCATACTTTTCT TAACAGCAAACCTTT TERM 1737 1076426 - 1076372 - f 88 -13.9 -2.83566 | gap 1, opp_overlap 1076377, overlap 1076371 1076377 ACATCAGATTTAAAC GACAAGTATGAT-TCAGCGGAATTCC GGGC GGAATTCCGGGGACATCATACTTTTC TTAACAGCAAACCTT TERM 1738 1076377 - 1076421 + F 100 -12.4 -4.63218 | gap 1, opp_overlap 1076372 1076371 1076377 AGATTTAAACGACAA GTATGAT-TCAGCGGAATTCC GGGC GGAATTCCGGGGACATCATAC TTTTCTTAACAGCAA TERM 1739 1076421 - 1076377 - f 88 -12.4 -3.62011 | gap 1, opp_overlap 1076377, overlap 1076372 1076371 AGATTTAAACGACAA GTATGAT-TCAGCGGAATTCC GGGC GGAATTCCGGGGACATCATAC TTTTCTTAACAGCAA TERM 1740 1076810 - 1076798 - f 73 -3.3 -4.87665 | overlap 1076799 TCTTACCCACAAAAA GCAGC GCG GCTGG GCTTGATCGTCAACC Dole_0921 1076842 - 1077687 + | abortive infection protein Dole_0922 1077709 - 1078572 + | hypothetical protein TERM 1741 1078710 - 1078743 + F 71 -9 -3.5882 | AAGAATCTTCTTGTA TTGAGTCTCATTTG AATATA CAATTGGGACTCAA TTTGGAGGTGATATC Dole_0923 1078759 - 1079046 + | prevent-host-death family protein TERM 1742 1079231 - 1079265 + G 78 -9.2 -4.07568 | opp_overlap 1079230, overlap 1079234 GCAGGATGTGAACAC CTTTCTGGCCTGGTTG AAA CAAACGGGCCAGGTGG TTTTCGGCGCGCCAC TERM 1743 1079234 - 1079262 + G 73 -11.7 -3.08032 | opp_overlap 1079230, overlap 1079231 GGATGTGAACACCTT TCTGGCCTGGTTG AAA CAAACGGGCCAGG TGGTTTTCGGCGCGC Dole_0924 1079043 - 1079483 + | nucleic acid binding protein Dole_0925 1079568 - 1079972 + | methyl-accepting chemotaxis sensory transducer TERM 1744 1080015 - 1079996 - f 76 -7 -4.35042 | opp_overlap 1079996, overlap 1079993 TTGACGATAAAACAA CCAGCCGG TTCA CCGGTCGG TACATTGGACCAGAG Dole_0926 1080041 - 1081060 + | O-methyltransferase family protein TERM 1745 1081387 - 1081405 + T 76 -2.2 -5.29445 | overlap 1081387 TTGTTTCGTTGTTCA GGGTGTTC ATA GTGCCCCC TTTTTATTATTGCAG TERM 1746 1081415 - 1081444 + T 100 -13.6 -4.29928 | overlap 1081416 GCCCCCTTTTTATTA TTGCAGGGGGGA TAACGT TCCCCCCTGCGG TTTTAAGTGTTAATT TERM 1747 1081416 - 1081443 + T 91 -14.9 -3.16872 | overlap 1081415 CCCCCTTTTTATTAT TGCAGGGGGGA TAACGT TCCCCCCTGCG GTTTTAAGTGTTAAT Dole_0927 1081915 - 1081454 - | hypothetical protein TERM 1748 1082010 - 1082023 + r 70 -2.5 -4.98531 | opp_overlap 1082017 1082019 TGACAACATATTGTT TTTAA AATA TTAAA TTTTTAATTTAAGAA Dole_0928 1083666 - 1082281 - | TetR family transcriptional regulator Dole_0929 1083873 - 1085498 + | acyl-CoA dehydrogenase domain-containing protein TERM 1749 1085555 - 1085518 - f 74 -6.3 -4.32048 | opp_overlap 1085523 GAATAAGAGTGAAAA CCAATTCGATACCGATA CCGA TAGCGATTTCGATTTGG ATAAACAACCGGCGA TERM 1750 1085693 - 1085681 - g 80 -10.5 -3.95852 | overlap 1085682 ATGGCACGAATGAAA GCCGG CCC CCGGC CGGTGATCGGGTGCC TERM 1751 1085696 - 1085682 - g 74 -12.8 -2.97029 | overlap 1085681 TGGCACGAATGAAAG CCGGCC CCC GGCCGG TGATCGGGTGCCTGC Dole_0930 1085645 - 1086778 + | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 1752 1086794 - 1086784 - g 84 -2.4 -5.4387 | AGATAAATGAAAAAA CCAG GGC CGGG AAGCATCTGACCGAA Dole_0931 1086765 - 1088024 + | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 1753 1088178 - 1088154 - f 70 -10 -3.17714 | overlap 1088157 GCAAATCCCGAGGAA TGAGGCGTAC TGGTC GTACGCCGCA GTGACGAGGGATGCA TERM 1754 1088175 - 1088157 - f 71 -10.3 -2.78395 | overlap 1088154 AATCCCGAGGAATGA GGCGTAC TGGTC GTACGCC GCAGTGACGAGGGAT TERM 1755 1088693 - 1088711 + G 72 -4.4 -4.56597 | GAGCCCAAGCCCGGT GCACCGCC GGC GGCCATGC TTTTTGGCGGGGCCG Dole_0932 1088264 - 1089445 + | lipid-transfer protein TERM 1756 1090228 - 1090238 + G 78 -8.2 -4.52589 | GATATGCATTGAGGA GCGG GTG CCGC TTTTCTGTGCGGGCC TERM 1757 1090352 - 1090362 + G 73 -3.2 -4.77165 | GGGCGGGTGGCTGCT TCCG GGG TGGA TTTTGTTGTGGCCCA TERM 1758 1090534 - 1090549 + G 71 -6.8 -4.20516 | overlap 1090541 GGGCTGTATCGGCGT CTGGGT GGGA ACCCGG TTTCTTGCGTCCAGA TERM 1759 1090745 - 1090759 + G 75 -9.2 -3.85698 | GTGGTCCTGGCCTCG GCCCTG ATC CGGGGC TTTGTCCAGGCGGGA Dole_0933 1089779 - 1090921 + | 2-nitropropane dioxygenase NPD TERM 1760 1091102 - 1091115 + G 81 -3.7 -5.03314 | overlap 1091103 AGAGCTTGACGCCTT TCGGG GAGC CCCGC TTTTTTCCCGGTCAA TERM 1761 1091585 - 1091603 + G 71 -8 -3.96148 | opp_overlap 1091573 CAAGTGCGGGCTTCG GGCCTCGG ACA CCGGGACC TTTGTGCTGAACAAC TERM 1762 1091677 - 1091639 - g 76 -3.1 -4.87803 | gap 2, opp_overlap 1091639 TATCCCCAAAGAAAA CCTTCT-TGG-CAGCGCGA AAA TCGAGCAGACCACAGAGGG CTTTAAAGGCGTCAT Dole_0934 1090956 - 1092155 + | acyl-CoA dehydrogenase domain-containing protein TERM 1763 1092171 - 1092183 + T 81 -3.4 -5.52384 | CATCAGGACAGGGTT CTTC ACATG GAAG TTTTTTTGATGGGCG Dole_0935 1093039 - 1092320 - | putative lipoprotein Dole_0936 1093415 - 1093669 + | XRE family transcriptional regulator TERM 1764 1093919 - 1093890 - g 76 -5.1 -4.7254 | gap 1, opp_overlap 1093912, overlap 1093873 1093892 AGCTTGCATGAAAAA GCTTC-AGTCTTCA GGA TGGAGACTGGAAAC ACCGGTTGATGTTGC Dole_0937 1093882 - 1094289 + | restriction endonuclease BamHI Dole_0938 1095671 - 1094286 - | putative RNA methylase TERM 1765 1095008 - 1095023 + g 78 -3.3 -5.07652 | opp_overlap 1095008 GCTCCATGACAGACA TCACA TTTTTT TGTGA TTTTCTTTTACAGGC TERM 1766 1095046 - 1095056 + g 74 -6.8 -4.2679 | TTACAGGCTCTGATT CCTG CCA CAGG TTTTCCTACACGTTC TERM 1767 1095138 - 1095148 + g 84 -4 -5.27335 | ACTCAAAGGGACTGT TAGA GCA TCTA TTTTTGTTTGAGCCA Dole_0939 1096573 - 1095668 - | DNA methylase N-4/N-6 domain-containing protein Dole_0940 1097606 - 1096596 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 1768 1096760 - 1096734 - G 71 -10.1 -3.53563 | gap 1, opp_overlap 1096750 ACACCGGGTGTGAAA CCGGCAGC-CCG GCGG CGGCGCTGACGG GGAGGGCACGTCTCC Dole_0941 1098671 - 1097682 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Dole_0942 1100559 - 1098694 - | extracellular solute-binding protein TERM 1769 1099992 - 1100011 + g 80 -5 -4.95487 | CCACGGCCAGGGTGT GGTCGT CATACACC ACGACC TTTTCTATTTCTTTT Dole_0943 1101789 - 1100743 - | binding-protein-dependent transport systems inner membrane component TERM 1770 1101358 - 1101348 - G 77 -8.2 -4.37763 | CCACGGAAAAAAAGA CCGC GAT GCGG AAGCCGTAGGCCAGC TERM 1771 1101494 - 1101519 + g 76 -3.1 -4.87318 | overlap 1101487 1101497 GGGTTGTAGGGCACG GGCGGCAGCAG CACC CAGTTGCCCTC TTTTTCGGTTTTGAA Dole_0944 1103041 - 1102025 - | binding-protein-dependent transport systems inner membrane component TERM 1772 1102351 - 1102364 + g 70 -2.3 -4.8622 | AGTCGGCGGCCAGTT CGTCC ATCA GGGTG TTTTTCATTAAAAAG TERM 1773 1103095 - 1103111 + r 71 -9.4 -3.49634 | overlap 1103097 GCGCCGTTGGAACGG GACCGG CCGCA CCGGTC TGTTATGTTTACCGT TERM 1774 1103189 - 1103164 - R 100 -14.1 -5.4505 | GCGGGCAATAAAAAA GGGGTGAAAGA AATC TCTTCCACCCC TTGAACGAACGTCGT Dole_0945 1103610 - 1103218 - | ribosomal protein S9 Dole_0946 1104066 - 1103629 - | 50S ribosomal protein L13 TERM 1775 1104043 - 1104057 + g 83 -5 -5.10077 | overlap 1104041 1104045 TTTGTCGGTCTCTCT TGCACT GTA AGTGTA TTTTTTCACGTCTTT Dole_0947 1104428 - 1104138 - | hypothetical protein Dole_0948 1105617 - 1104550 - | hypothetical protein TERM 1776 1105137 - 1105156 + g 71 -7.8 -3.95836 | overlap 1105133 GCTCCTCAGCCGTCA TGCCCAGC AGCA GCTCGGCA TTATCTTTTCCCCAT TERM 1777 1105458 - 1105494 + g 78 -9.9 -4.07568 | overlap 1105459 CTTCGGCTTCTGCTG CCGGCTCCGGCGCCGGT TCG ACCAGGGCGGGGGCCGC TTTTGCCAAAAGGGG TERM 1778 1105459 - 1105493 + g 79 -13.4 -3.04398 | overlap 1105458 TTCGGCTTCTGCTGC CGGCTCCGGCGCCGGT TCG ACCAGGGCGGGGGCCG CTTTTGCCAAAAGGG TERM 1779 1105514 - 1105530 + g 72 -9.3 -3.71686 | opp_overlap 1105507 GCCAAAAGGGGCGCT GCCGGCG GTA CACCGGC TTCTGTTCCGTTGAA TERM 1780 1105593 - 1105572 - G 76 -2.9 -4.89852 | gap 1, overlap 1105573 1105575 GCACAGTCATAAAAA TCAGCACGCC GCA GGC-CGCTGC GCCTGCCATCTGATA TERM 1781 1105650 - 1105684 + r 74 -6.3 -4.37886 | opp_overlap 1105649 1105648, overlap 1105651 1105652 TCATAAAAGAGAAGC GTGCAGGGGCGTC GTAACACCG GACGCCCCCGCGG TTTTATGAAGCATGC TERM 1782 1105651 - 1105683 + r 70 -9.8 -3.2241 | opp_overlap 1105649 1105648, overlap 1105650 1105652 CATAAAAGAGAAGCG TGCAGGGGCGTC GTAACACCG GACGCCCCCGCG GTTTTATGAAGCATG TERM 1783 1105652 - 1105682 + r 72 -11.1 -2.53125 | opp_overlap 1105649 1105648, overlap 1105651 1105650 ATAAAAGAGAAGCGT GCAGGGGCGTC GTAACACCG GACGCCCCCGC GGTTTTATGAAGCAT Dole_0949 1106953 - 1105709 - | PGAP1 family protein TERM 1784 1106517 - 1106485 - G 81 -12.6 -3.53012 | opp_overlap 1106485 CCTTTCGGTCGTAAA GCAGCTTGGCCGCC TTTCT GGCGTCCATGCCGC CCTGGGAGTGGCCCA TERM 1785 1106785 - 1106799 + g 74 -7.1 -4.36914 | opp_overlap 1106783 1106785 TGCCGTGGGCAAATA CCACC GGATA GGTGG TTTTATCGGCCCGGG TERM 1786 1107062 - 1107048 - H 80 -7.1 -4.62069 | GCCCCATGGGAAAAA GGTGC GGACA GCACC CGGGTGTGAGAAAAA TERM 1787 1107286 - 1107270 - g 76 -2.9 -4.87665 | overlap 1107271 TTGCAGGCAGAAAAA CCACAAC CGG GTTGCGC TGGGGCTGAAACTTA Dole_0950 1107103 - 1107363 + | hypothetical protein TERM 1788 1107810 - 1107798 - g 78 -3.3 -5.055 | overlap 1107799 1107800 TCAACGGCGAAAAAA TCGGT GAA ACCGG CCGGTTTTTCCCCAA Dole_0951 1107407 - 1109122 + | AraC family transcriptional regulator Dole_0952 1109312 - 1109151 - | hypothetical protein Dole_0953 1110673 - 1109447 - | hypothetical protein TERM 1789 1109594 - 1109618 + g 71 -11.4 -3.24747 | GGTCAGCACCTGCTC CCGGCTGAGC AGGGG GATCAGCCGG TTGATACTCTGCGCG TERM 1790 1109830 - 1109840 + g 74 -8.2 -4.11216 | opp_overlap 1109825 1109821, overlap 1109823 GATAAAGCGAGGCCA GGCG GGC CGCC TTTTCCGGATCCAGC TERM 1791 1110532 - 1110564 + g 77 -12 -3.53012 | gap 1, overlap 1110534 1110535 AATAGTTCCCCTTCG TGTCGGCCGGCTGCC CCAC GGCA-CCGGCCGGTG TTTCGACAGCGGGCA TERM 1792 1110534 - 1110562 + g 87 -14.6 -3.34398 | gap 1, overlap 1110532 1110535 TAGTTCCCCTTCGTG TCGGCCGGCTGCC CCAC GGCA-CCGGCCGG TGTTTCGACAGCGGG TERM 1793 1110535 - 1110561 + g 84 -15.9 -2.60496 | gap 1, overlap 1110534 1110532 AGTTCCCCTTCGTGT CGGCCGGCTGCC CCAC GGCA-CCGGCCG GTGTTTCGACAGCGG TERM 1794 1110803 - 1110824 + r 71 -6.5 -4.23758 | gap 1, opp_overlap 1110803 1110801 GCTTTTCGACTAACA GAGGGC-GTC GCT GTCTGCCCTC TTTTACGTATCAAAT Dole_0954 1111879 - 1110827 - | TPR repeat-containing protein TERM 1795 1111544 - 1111528 - G 74 -2.2 -4.99056 | GAATATAATGAAAAA CGCC GTGGTAATA GGCG TCAAACAATTCCGGA TERM 1796 1112088 - 1112069 - H 73 -2.2 -5.09762 | ATGTCAATATAAAAA TTTGATAG AAGG CTATGAAA CGCCCATTTGAATGG TERM 1797 1112287 - 1112303 + G 80 -5.1 -4.87892 | AATACTGGTCATTGC CGGCA TCTGTTT TGCCG TTTATTTTATTGCCA TERM 1798 1112387 - 1112365 - g 71 -7.6 -4.07885 | CATGGCGCCGGAAAA GCTGGCCGAA TTT TTGGGCCGGC CCGTGGCTGTGGAGA TERM 1799 1112677 - 1112650 - g 83 -5.4 -4.96523 | AAAGGAAGAAGAAAA CCCGGCGGAGGA AAAG TCGCCTGCCGAG CCCTTTGGGTTTGCT TERM 1800 1112917 - 1112899 - g 72 -4.4 -4.58283 | overlap 1112901 CAAGCCTTTTAAAAA CTCCATGG AAA CCGTGGTG GACATGGCCCTTTCC TERM 1801 1115257 - 1115291 + G 84 -7.3 -4.82901 | gap 2 AAAGGTCAAGGATTA CCTGCTGTCGGATGAAA CCC TTTC-TCCGG-AGCGGG TTTTTATGAAGGCCC TERM 1802 1115337 - 1115325 - g 71 -6.9 -4.14472 | opp_overlap 1115325, overlap 1115326 GCAACATCTTTAAAA CCGCC GAT GGCGA ATTTGCCGCCAGCCG Dole_0955 1112252 - 1115374 + | hypothetical protein TERM 1803 1116956 - 1116974 + G 75 -5.3 -4.56775 | gap 1 CAAAATATGGGTGGA TGACGAGG CATT CC-CGTCA TTTTTCGGGACCGGT Dole_0956 1115502 - 1117286 + | hypothetical protein TERM 1804 1117337 - 1117312 - T 85 -10.3 -4.1673 | overlap 1117315 CAAGGTTTCAAGAAA CAGCCGGGCCG GGGG CGGCACGGATG ATCAGAGGATAGCAA TERM 1805 1117334 - 1117315 - T 71 -10.6 -2.80244 | overlap 1117312 GGTTTCAAGAAACAG CCGGGCCG GGGG CGGCACGG ATGATCAGAGGATAG Dole_0957 1119272 - 1117401 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Dole_0958 1119440 - 1120360 + | hypothetical protein TERM 1806 1120376 - 1120351 - T 76 -11.9 -2.76404 | gap 1, opp_overlap 1120351, overlap 1120348 1120347 TGCACCCAAAATTGA CCGGC-GATAGG TTT CCTACCGGCCGG TTTCCACCAGGTCCC TERM 1807 1120351 - 1120376 + T 74 -9.7 -3.53811 | gap 1, opp_overlap 1120351 1120348 1120347 TGCACCCAAAATTGA CCGG-CGATAGG TTT CCTACCGGCCGG TTTCCACCAGGTCCC Dole_0959 1121778 - 1120366 - | aspartate kinase TERM 1808 1120552 - 1120573 + g 76 -2.9 -5.0133 | overlap 1120554 GGCCATGTTGGTGCC GATGGCC GATACCAA GGCCACC TTTTTTACCAGAATG TERM 1809 1120870 - 1120882 + g 76 -3.3 -5.00616 | GGTGCCGGGATGGTC CGGCT CGA AGACG TTTTTTACCCGCAGC TERM 1810 1121597 - 1121609 + g 70 -2.6 -4.81212 | opp_overlap 1121595, overlap 1121595 AACAGGGAATAGACG CCGG AGTCG CTGG TTTTCTTGTGCTCCA TERM 1811 1121738 - 1121753 + g 74 -2.4 -5.02476 | overlap 1121739 1121740 TTGTCGAACTGGCTC ATGGCG GTGC CGCCGA TTTTTTCAACCGTAT Dole_0960 1122177 - 1121788 - | L-ectoine synthase TERM 1812 1122003 - 1122016 + g 79 -5.9 -4.82901 | opp_overlap 1122003 CGGCCACGCAATAGA CCGCC TCCA GGTGG TTTTTGTACCAGAAC Dole_0961 1123451 - 1122177 - | diaminobutyrate--2-oxoglutarate aminotransferase TERM 1813 1122317 - 1122339 + g 75 -9 -4.07687 | CCTGGTCGTCTCCAC CGGCCAGCTC AAT GACCAGGCCG TTTTCAAAGCAGCGT TERM 1814 1122878 - 1122919 + g 71 -10.9 -3.19602 | gap 1, overlap 1122871 1122870 1122877 CTGGTATGTCCAGGC CGCTGGAGTTG-TCCGCCAG CAT CTTGCGGAACAGGTCCAGTG TGTTGATCTCCGGCC TERM 1815 1123196 - 1123206 + g 77 -2.4 -5.06451 | opp_overlap 1123179, overlap 1123179 TGTCGCTGAATTTCT GCAG AAA CCGC TTTTTTGCCGTGGTG Dole_0962 1124162 - 1123656 - | L-2,4-diaminobutyric acid acetyltransferase TERM 1816 1123858 - 1123885 + g 85 -11.3 -4.07687 | opp_overlap 1123849 1123848 1123852 1123881, overlap 1123865 1123883 ATAAATTCAGGCTCG GCCTGTTGGGC CAGAGC GACCAACAGGC TTTTGCCCAGGCCCT Dole_0963 1125095 - 1124163 - | porphobilinogen deaminase TERM 1817 1124201 - 1124211 + g 71 -8.2 -4.08216 | overlap 1124199 TTTCTGCCAGCAGGG CGGC GCC GCCG TTTTCCAGAACATGG TERM 1818 1124236 - 1124278 + g 76 -13.2 -3.13071 | overlap 1124234 ACATGGTTTCCCAGA TCCGTGCCGATGGCGGTTGC CTG GCTGCCGGCGCCGGCGCGGG TGTTGAATATAAATT TERM 1819 1124449 - 1124465 + g 95 -3.6 -5.75342 | opp_overlap 1124403 1124451, overlap 1124451 GCCGGGTGGTTGATA CAGGCC CGAAT GGCCTC TTTTTTTTCAGCAGC TERM 1820 1124451 - 1124463 + g 74 -6.2 -4.52949 | opp_overlap 1124403 1124451, overlap 1124449 CGGGTGGTTGATACA GGCC CGAAT GGCC TCTTTTTTTTCAGCA TERM 1821 1126106 - 1126127 + G 74 -11.5 -3.57144 | overlap 1126095 1126094 TCAGCTGCTGGCCGG CCGGCAGGT TATG ACCCGCCGG TTTAAGGCTAAAAAA Dole_0964 1125894 - 1126829 + | putative radical SAM protein TERM 1822 1126821 - 1126874 + T 75 -11.6 -2.55551 | gap 1, overlap 1126810 1126843 1126843 AAAACCCTGCCAGGC CCGGGGTGATCTGTCACCGGGCGGG GGGTG CCCGCCCGGTGACAGC-CGTGCGGA TCAGTTCCCCTTGTA Dole_0965 1127087 - 1126875 - | hypothetical protein TERM 1823 1127188 - 1127177 - H 80 -7.2 -4.57073 | opp_overlap 1127155 1127154 CATGCCGGGTAAAAA CCGG CGCG CCGG ACAGTTTCGGCGGAA Dole_0966 1127492 - 1129021 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1824 1129320 - 1129307 - g 72 -5.9 -4.52589 | overlap 1129309 GTGGCCGAGATAAAA GCGGC CCAG ACCGC CCTTGCCCAGAAGGT Dole_0967 1129028 - 1129819 + | hypothetical protein Dole_0968 1130625 - 1129879 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase TERM 1825 1130004 - 1130014 + g 74 -6.8 -4.28375 | overlap 1129999 GTTCCAGTGCCCGGA GCTG CTC CAGC TTTTCAATCTCTTCC TERM 1826 1130940 - 1130927 - g 70 -3.8 -4.56597 | TCGGGGCCGGAAAAA CACC GGAACA GGTG TGCGGTATCATGGAA Dole_0969 1130749 - 1131498 + | hypothetical protein TERM 1827 1131984 - 1132005 + G 89 -2.2 -5.67967 | gap 1, opp_overlap 1131973, overlap 1131987 ATGACCGGCGGCGGC TGCCCTGGC GAAGG GCCTG-GCA TTTTTTTCTCATCCT TERM 1828 1132105 - 1132057 - g 73 -11 -3.35679 | overlap 1132084 GCCGCGCATCGACAA GGACCTGTTTGTGAACATCAAG GATAA CCTGATGCTCACCACCCGGCCC GGCATGGCGTTGGTA TERM 1829 1132389 - 1132401 + G 73 -3.3 -4.82901 | TGACCGACACAGGGA GCCTG CTT CACGC TTTTTCTGACAAAAC TERM 1830 1132728 - 1132711 - g 74 -7 -4.29738 | opp_overlap 1132711 1132710, overlap 1132724 GTACATTCACGAAAA CGGGAT GGAGAT ATCCCG GTTTCCCGGGTTCCG Dole_0970 1131506 - 1133035 + | hypothetical protein TERM 1831 1133582 - 1133597 + G 72 -4.6 -4.56607 | opp_overlap 1133583, overlap 1133583 CTTATGAAAAGGAAA AGAGCC TGGC GGCTCC TTTTGTCATTCATGC TERM 1832 1133596 - 1133583 - g 83 -8.1 -4.70319 | opp_overlap 1133582 1133583 TTATGAAAAGGAAAA GAGCC TGGC GGCTC CTTTTGTCATTCATG Dole_0971 1133011 - 1133652 + | abortive infection protein Dole_0972 1134438 - 1133683 - | hypothetical protein TERM 1833 1134041 - 1134022 - G 72 -4.8 -4.56597 | overlap 1134023 GTCCCGGCCGAAAAA GCCGGGGC CCAT GCGCCGGG TAAAGGCGATGCTTA Dole_0973 1135958 - 1134534 - | polynucleotide adenylyltransferase/metal dependent phosphohydrolase TERM 1834 1135694 - 1135704 + g 73 -3.2 -4.82901 | CCACGTCAATGGATT CAGC CGG GTTG TTTTTGTCCACCACG Dole_0974 1136932 - 1135970 - | cation diffusion facilitator family transporter Dole_0975 1138100 - 1136964 - | metallophosphoesterase TERM 1835 1137158 - 1137212 + g 83 -7.8 -4.70659 | opp_overlap 1137151 1137150, overlap 1137159 1137161 AATCAAAGGGCCATA TCTGGCCGCCGTGGGTG-TGGCCGGA GAGCA TCAGGTCAACACCCA-GGCGGGCTGC TTTTTCCATGTCCCA TERM 1836 1137159 - 1137211 + g 73 -11.3 -3.41913 | opp_overlap 1137151 1137150, overlap 1137158 1137161 ATCAAAGGGCCATAT CTGGCCGCCGTGGGTG-TGGCCGGA GAGCA TCAGGTCAACACCCA-GGCGGGCTG CTTTTTCCATGTCCC TERM 1837 1137161 - 1137209 + g 79 -12.5 -3.27476 | opp_overlap 1137151 1137150, overlap 1137159 1137158 CAAAGGGCCATATCT GGCCGCCGTGGGTG-TGGCCGGA GAGCA TCAGGTCAACACCCA-GGCGGGC TGCTTTTTCCATGTC TERM 1838 1137509 - 1137489 - G 75 -8.9 -4.07885 | CAGGGGGGCTGAAAA CCGGCCAAG GGC CTGGGCCAG GCGGTCGTGGGGGCC TERM 1839 1137937 - 1137920 - G 100 -4 -6.17268 | overlap 1137921 1137922 CCAGAACAAAAAAAA CCGGCC CTTCAT GGCCGT GGGCCCAGATGCCCC TERM 1840 1137936 - 1137921 - G 74 -7.5 -4.27921 | overlap 1137920 1137922 CAGAACAAAAAAAAC CGGCC CTTCAT GGCCG TGGGCCCAGATGCCC TERM 1841 1138000 - 1138014 + g 70 -4.2 -4.56597 | opp_overlap 1137982 CCGCCGGCCAGTTGC CCGG CGGAAAA CCGG TTTTTAAAAAAAGGG TERM 1842 1138184 - 1138164 - H 70 -9.7 -3.17763 | overlap 1138169 1138170 TTTATATGGTAGTAA TGAAAGCCG GGC CGGCTGTCA ACAGATAAAAGCCGG TERM 1843 1138179 - 1138169 - H 73 -8.2 -3.95852 | overlap 1138164 1138170 ATGGTAGTAATGAAA GCCG GGC CGGC TGTCAACAGATAAAA Dole_0976 1138244 - 1138612 + | membrane protein Dole_0977 1138800 - 1138949 + | hypothetical protein TERM 1844 1139332 - 1139352 + G 70 -3.8 -4.56597 | opp_overlap 1139332 1139336, overlap 1139334 1139338 GCGACCGGCGAACAA CCGAGCCG CCGGC CGGCGCTG TTTTTCCCCGAACAC Dole_0978 1138963 - 1140834 + | carbamoyltransferase TERM 1845 1141298 - 1141330 + G 87 -8.3 -4.72272 | CCCAACCTGAAGGTG GAGCACACCCTGATC GAC GGCCAGTGGGTGCTC TTTTTCGTGGCCGGC Dole_0979 1140815 - 1141438 + | nuclear protein SET TERM 1846 1142406 - 1142424 + G 72 -4.4 -4.58685 | GGCCGCCGCATGCCC GGCGCAAC CGT GATGCCCC TTTTTGCCCGGCTTT TERM 1847 1142450 - 1142460 + G 74 -2.4 -5.00616 | overlap 1142446 1142440 GCTTTCCGGTGCGGA CCAG GCC CGGG TTTTTTCCAGGCCCC Dole_0980 1141452 - 1145375 + | ATP-dependent helicase HrpA Dole_0981 1150791 - 1145416 - | PAS/PAC sensor hybrid histidine kinase TERM 1848 1145809 - 1145839 + g 79 -12.5 -3.41229 | opp_overlap 1145803 1145804, overlap 1145804 1145803 GCCGGAAAAGGCCGG GACCGGCGTTTCG CCCAC CGAATCGCCGGCC TTCTGCTGCGGCTGT TERM 1849 1146125 - 1146147 + g 74 -7.8 -4.14013 | opp_overlap 1146117 GCGGAAACCGCAACC TTCACCGA TCCGGCC TCGGTGAA TTTTACGGCGTTTTC TERM 1850 1146595 - 1146631 + g 71 -11.5 -3.28912 | opp_overlap 1146606, overlap 1146596 TGAGGCCTCGGCCAG GCTGGACAGCACCACCT GGG AGGCGGTGTTGGCCAGG TTGCTGTACATCTCG TERM 1851 1146596 - 1146630 + g 81 -15 -2.57026 | opp_overlap 1146606, overlap 1146595 GAGGCCTCGGCCAGG CTGGACAGCACCACCT GGG AGGCGGTGTTGGCCAG GTTGCTGTACATCTC TERM 1852 1147154 - 1147167 + g 70 -4.5 -4.55287 | gap 1, overlap 1147150 AGCAATCGGTTGTGG GCC-GC CTC GCTGGC TTTTCTGTCGGTGAC TERM 1853 1149155 - 1149165 + g 91 -8.2 -5.16572 | TCACTTTGGCGAATG GCGG CCT CCGC TTTTTTGCGTTCCGT TERM 1854 1149328 - 1149345 + g 76 -6.9 -4.4521 | CGGGTCCACACCCGG CTTGCCC TCCA GGGCCAG TTCTTTTTCGATGGT TERM 1855 1149560 - 1149570 + g 77 -2.4 -5.16572 | TCACTCTCCCGAATG GCTG CTT CCGC TTTTTTACGTTCCGT TERM 1856 1150153 - 1150143 - G 74 -2.4 -5.02074 | opp_overlap 1150145 CGATGGTGGAAAAAA GGTC TTC GGCC GTCCGGGGGTCCTTG TERM 1857 1150361 - 1150393 + g 80 -4.9 -4.91109 | gap 2 CGGTCATCCACGTAC CGGCTGACCCCGATG AGTCC CGT-GGGGTT-GCCG TTTTTGTCATACAGA TERM 1858 1150542 - 1150564 + g 70 -2.7 -4.82901 | gap 1, overlap 1150544 CCAGATCGATAATTT TTTC-CACCG ATGC CGGTGTGACA TTTTTATCAAAGGGA TERM 1859 1150653 - 1150687 + g 71 -10.3 -3.53444 | gap 2 AGGTATATTTGAAGT CCATATCCATG--GTGA AGA TCACTTCATGGATATGG TTTGCCAGCAGGTGG TERM 1860 1150973 - 1150949 - H 77 -6.4 -4.4891 | overlap 1150951 GGCATGATCATAAAA CATATCGGTC TGACG GGCCGACATG CCGATAGGCAACCCC TERM 1861 1151294 - 1151343 + G 70 -12 -2.73875 | opp_overlap 1151280, overlap 1151291 1151296 AGGGCTGGCCTATGC GGCCCGGCATGTGGCCGGATGG ATGAAG CCTTCCCGTCGTACGCCGGGTC TGATGTTCCGGCCGG Dole_0982 1151013 - 1152470 + | aldehyde dehydrogenase TERM 1862 1152549 - 1152573 + T 71 -4.8 -4.56597 | opp_overlap 1152549, overlap 1152550 TTCGTGTCCAAACAC TCTGCCGGCT TAGTT GGCCGGCCGC TTTTTAACACGAAGA TERM 1863 1152630 - 1152618 - T 77 -10.5 -3.60475 | AAGAAAGTGGTGAAA GCCCG TAC CGGGC AGCGGCCCTACAGCT Dole_0983 1153366 - 1152638 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1864 1152918 - 1152930 + g 75 -5.5 -4.61482 | opp_overlap 1152911 GGAAAGAAGACCACC GAGGC CCC GCTTC TTATTTTTTCGCCGG Dole_0984 1154524 - 1153430 - | glycosyl transferase group 1 TERM 1865 1153577 - 1153589 + g 70 -2.6 -4.84529 | CAGCCGGGCCAGTTT GGCT ACCAG GGCC TTTTTCCCTTTGTAA Dole_0985 1155463 - 1154594 - | glycosyl transferase family protein TERM 1866 1154699 - 1154717 + g 70 -4.5 -4.41494 | gap 1, overlap 1154699 1154700 CCTTTTTTCACAACC G-GCCGCG TAGA TGCGGCAC TTTTCCTTCAGCATG TERM 1867 1155615 - 1155669 + r 100 -11.6 -4.59773 | opp_overlap 1155626 1155629, overlap 1155626 1155628 1155629 1155631 AGACTTTTTTGTGTG TTTTTATAAAACAAGAGGGGCGACAC GCA GTGTCGTCCCTCCTCTTTTATACACG TTTTTGGCAGTCGGG TERM 1868 1155658 - 1155626 - R 100 -12.7 -4.36914 | opp_overlap 1155626 1155615 1155628 1155629 1155631, overlap 1155629 TGTGTTTTTATAAAA CAAGAGGGGCGACAC GCA GTGTCGTCCCTCCTC TTTTATACACGTTTT TERM 1869 1155626 - 1155658 + r 100 -12.7 -4.41844 | opp_overlap 1155626 1155629, overlap 1155615 1155628 1155629 1155631 TGTGTTTTTATAAAA CAAGAGGGGCGACAC GCA GTGTCGTCCCTCCTC TTTTATACACGTTTT TERM 1870 1155628 - 1155656 + r 100 -15.3 -3.80535 | opp_overlap 1155626 1155629, overlap 1155626 1155615 1155629 1155631 TGTTTTTATAAAACA AGAGGGGCGACAC GCA GTGTCGTCCCTCC TCTTTTATACACGTT TERM 1871 1155629 - 1155655 + r 100 -18.8 -2.87598 | opp_overlap 1155626 1155629, overlap 1155628 1155626 1155615 1155631 GTTTTTATAAAACAA GAGGGGCGACAC GCA GTGTCGTCCCTC CTCTTTTATACACGT TERM 1872 1155655 - 1155629 - R 100 -16.6 -4.30995 | opp_overlap 1155629 1155628 1155626 1155615 1155631, overlap 1155626 GTTTTTATAAAACAA GAGGGGCGACAC GCA GTGTCGTCCCTC CTCTTTTATACACGT TERM 1873 1155631 - 1155653 + r 100 -15.6 -2.98387 | opp_overlap 1155629 1155626, overlap 1155629 1155628 1155626 1155615 TTTTATAAAACAAGA GGGGCGACAC GCA GTGTCGTCCC TCCTCTTTTATACAC Dole_0986 1157497 - 1155695 - | radical SAM domain-containing protein TERM 1874 1155729 - 1155739 + g 70 -2.4 -4.72272 | opp_overlap 1155729 TTGTGCCTGTCAAAG CCGG TAT CCTG TTTTTCCTCGGCAAA TERM 1875 1157356 - 1157400 + g 90 -7.7 -5.011 | gap 1 GGTTGCATGTGTCGG GCAGCAGGGCCGCCACGGTG ATCAGG CCCAGGGGCGGCA-TGCTGC TTTTCTTGTTTACAT Dole_0987 1158602 - 1157751 - | MCP methyltransferase, CheR-type Dole_0988 1159764 - 1158610 - | response regulator receiver modulated CheB methylesterase Dole_0989 1160261 - 1159812 - | CheW protein Dole_0990 1163565 - 1160308 - | CheA signal transduction histidine kinase TERM 1876 1160689 - 1160715 + g 74 -11.4 -3.53012 | overlap 1160690 GAGCGTTGCCTTGTT TCCCTCGGCCAC GGG GCGGCCGGGGGC TTTGCCGCCCGCGAC TERM 1877 1160690 - 1160714 + g 83 -14.9 -2.71712 | overlap 1160689 AGCGTTGCCTTGTTT CCCTCGGCCAC GGG GCGGCCGGGGG CTTTGCCGCCCGCGA TERM 1878 1160999 - 1160983 - G 83 -9.3 -4.4078 | overlap 1160985 TTCGCTCAAGGAAAA GAGGGGC AGT GCCCCGC CCCGGTATTGAATGA TERM 1879 1161002 - 1160985 - G 77 -10.5 -3.8125 | overlap 1160983 CGCTCAAGGAAAAGA GGGGCAG TGCC CCGCCCC GGTATTGAATGATTC TERM 1880 1161149 - 1161162 + g 79 -5.9 -4.72272 | TTGGTCTGGTCCGAT GCCGT GGCC GCGGC TTTTTCCTCGGCGGC TERM 1881 1161176 - 1161189 + g 75 -5.9 -4.57073 | overlap 1161169 GCTTTTTCCTCGGCG GCCCG CTGC TGGGC TTTTTCCGACAGCTC TERM 1882 1162865 - 1162845 - G 87 -7.5 -4.87626 | overlap 1162859 GCTCAACATTAAAAA GCGACGGCA GGA TATCGTCGC CGATGCGGGAGGAGT TERM 1883 1163750 - 1163772 + r 79 -11.2 -3.53012 | overlap 1163755 TTATCGCAGGTGTTC CCCCCCCTGT GTC GCAGGCGGGG TTTCCCGGCACCGGA Dole_0991 1165018 - 1163735 - | peptidase U32 TERM 1884 1163826 - 1163851 + g 71 -11.1 -3.20991 | opp_overlap 1163818 1163819 GCGGAAAGGACCAGG GTGGCCGTGCT GTTG GGCATGGCCGC TTCCATTGGGTTGCC TERM 1885 1164027 - 1164047 + g 76 -12.5 -3.14463 | overlap 1164032 AAGCGGTATGCTGTG CCGGGCCGG GCA CCGGTTCGG TTGATGCCCCCGCTT TERM 1886 1164895 - 1164884 - G 71 -7.2 -4.18197 | overlap 1164885 ATTGCGCAGGGAAAA GCGG CTGT CCGC CAGGTAGACGGCGTC TERM 1887 1165617 - 1165631 + G 79 -5.6 -4.82863 | GTCTATTTTCCCTGG CGGCAG GGC CTGACG TTTCTTTTCTCCTTC Dole_0992 1165197 - 1165682 + | hypothetical protein Dole_0993 1165741 - 1166178 + | hypothetical protein TERM 1888 1166882 - 1166900 + G 84 -2.3 -5.4505 | gap 1, overlap 1166884 GGTCAATCCCGCCAA CG-GCAGG GAGA CCGGCTCG TTTTTTATTCGGGCC TERM 1889 1167369 - 1167387 + G 73 -11.6 -3.36341 | overlap 1167367 1167370 1167381 GCCGACATCTTTTTT GCCGCCGG GGC CCGGCGGG TGTTTACCGGCTGTT TERM 1890 1167370 - 1167386 + G 81 -15.1 -2.61322 | overlap 1167369 1167367 1167381 CCGACATCTTTTTTG CCGCCGG GGC CCGGCGG GTGTTTACCGGCTGT TERM 1891 1167470 - 1167451 - g 74 -7.8 -4.11484 | opp_overlap 1167450 1167463 TGGAACGGTTCAAAA CCATGCCC ATCC GGCCATGG CATTTCGAGCTCATG Dole_0994 1166178 - 1167695 + | glucose-methanol-choline oxidoreductase Dole_0995 1167755 - 1168768 + | hypothetical protein Dole_0996 1169089 - 1168841 - | hypothetical protein Dole_0997 1169143 - 1169577 + | adenylylsulfate reductase, beta subunit Dole_0998 1169657 - 1171636 + | adenylylsulfate reductase TERM 1892 1171690 - 1171665 - f 100 -16.2 -4.19371 | opp_overlap 1171665 1171674, overlap 1171654 TAAAGCGGCAATAAA CCTCCAGGCG CTTTGC CGCCTGGAGG TTTTTATTAAAAACG TERM 1893 1171665 - 1171690 + F 100 -16.2 -5.06414 | opp_overlap 1171654 1171665, overlap 1171674 TAAAGCGGCAATAAA CCTCCAGGCG CTTTGC CGCCTGGAGG TTTTTATTAAAAACG TERM 1894 1171702 - 1171746 + F 74 -9.9 -3.59738 | gap 2, opp_overlap 1171704 1171705, overlap 1171674 1171703 GAGGTTTTTATTAAA AACGG--CCAGGGCGGCCGGC CTTCT GCCGGCCGCCCTGATCCCGGC TTTACGACTGTGGTG TERM 1895 1171703 - 1171745 + F 85 -13.4 -2.75521 | gap 2, opp_overlap 1171704 1171705, overlap 1171674 1171702 AGGTTTTTATTAAAA ACGG--CCAGGGCGGCCGGC CTTCT GCCGGCCGCCCTGATCCCGG CTTTACGACTGTGGT TERM 1896 1171742 - 1171704 - f 100 -19.5 -4.72272 | opp_overlap 1171674 1171703 1171702, overlap 1171705 GGTTTTTATTAAAAA CGGCCAGGGCGGCCGGC CTTCT GCCGGCCGCCCTGATCC CGGCTTTACGACTGT TERM 1897 1171741 - 1171705 - f 100 -23 -3.43042 | opp_overlap 1171674 1171703 1171702, overlap 1171704 GTTTTTATTAAAAAC GGCCAGGGCGGCCGGC CTTCT GCCGGCCGCCCTGATC CCGGCTTTACGACTG TERM 1898 1171816 - 1171839 + F 86 -8 -4.8667 | opp_overlap 1171816 GGCCAGATTCGTAAA GCGACCGGGC AGCA GGCGGGTCGC TTTTTCTACCGTATC TERM 1899 1173111 - 1173094 - g 71 -12.7 -2.59039 | overlap 1173093 AATGATTTTGACAAG GGCGGCA TGTT TGCCGCC GGGTGTGCCAACAAA Dole_0999 1171930 - 1173201 + | heterodisulfide reductase, subunit A (HdrA) TERM 1900 1173785 - 1173747 - g 78 -3 -5.1101 | gap 2, opp_overlap 1173752, overlap 1173749 CCATTATTGAAAAAA GC-GGCGC-GCTGGGCGG TTTTG CCGCGCAGATGCGCATGC AGTCTCCGGTTGCAA Dole_1000 1173212 - 1175548 + | methyl-viologen-reducing hydrogenase delta subunit Dole_1001 1175585 - 1176781 + | heterodisulfide reductase, putative TERM 1901 1176817 - 1176840 + T 100 -16.8 -5.47159 | opp_overlap 1176817 TTGCAGTGATAAAAA GGGAGGCTGA AAAT TCAGCCTCCC TTTTTTGTCTTGCGG TERM 1902 1176840 - 1176817 - T 100 -16.8 -4.87665 | opp_overlap 1176817 TTGCAGTGATAAAAA GGGAGGCTGA AAAT TCAGCCTCCC TTTTTTGTCTTGCGG TERM 1903 1176982 - 1177018 + T 95 -13.8 -3.91897 | opp_overlap 1176987, overlap 1176987 ACTCGAGCACAAATA AAAAAGGCGCCGAAGG TTTTT CCTTCGACGCCTTTTG TTTCTGGGTCAGCCC TERM 1904 1177013 - 1176987 - T 100 -15.9 -5.73978 | opp_overlap 1176982 1176987 AGCACAAATAAAAAA GGCGCCGAAGG TTTTT CCTTCGACGCC TTTTGTTTCTGGGTC TERM 1905 1176987 - 1177013 + T 100 -13.7 -5.0065 | opp_overlap 1176987, overlap 1176982 AGCACAAATAAAAAA GGCGCCGAAGG TTTTT CCTTCGACGCC TTTTGTTTCTGGGTC Dole_1002 1178320 - 1177046 - | sulfate adenylyltransferase TERM 1906 1177969 - 1177983 + g 75 -8.6 -4.09805 | ACTTTTCGGTGACCT TCATGG TGG CCATGA TTTCGTTGTTCGTCG TERM 1907 1178224 - 1178234 + g 100 -8.2 -5.46706 | GGGGAATCTTTTTCA GGCC TTC GGCC TTTTTCTTTTCCGCT TERM 1908 1178605 - 1178593 - g 77 -2.6 -5.06414 | overlap 1178596 CTGTTCGAAGAAAAA GAGC GCCTG GCCC TGGGCCTTCCGGCCC TERM 1909 1179200 - 1179184 - g 70 -2.1 -4.7254 | overlap 1179185 AGCCGTTATGAAAAA CCCCTGG AGA CCATGGC CGAATTAAAACAGAA Dole_1003 1178563 - 1181028 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 1910 1181038 - 1181077 + F 100 -17.1 -4.36914 | overlap 1181070 1181073 TTGTAATTCAGATGT GCCGCCGGCCCGGGTCT TATGAT ACATGCGGGCCGGCGGC TTTTATCCCGCCGCG TERM 1911 1181556 - 1181537 - g 80 -10 -4.07568 | CCTTTCCCTGGAAAA GCCCACTG CGTC CAGTGAGC TGGAACGGCGCATGC TERM 1912 1183374 - 1183400 + G 70 -4.3 -4.57341 | gap 1, opp_overlap 1183355, overlap 1183353 1183351 1183374 GCCGCAAGCCGGGTT GG-CGCGGCGGC CGGT GTCGTCTCGTCC TTTTTCAGGCCGGTT Dole_1004 1181337 - 1183532 + | hypothetical protein Dole_1005 1183876 - 1183538 - | hypothetical protein TERM 1913 1183962 - 1183974 + H 79 -3.3 -5.24129 | GGATTTTCAGTACGA CTCGT ATG GCGGG TTTTTTATGGGAGCA TERM 1914 1184475 - 1184463 - g 74 -7.7 -4.16307 | TCCCGAACAAAAAGA GATCC TGT GGATC GGGTGCATGGGCAAG Dole_1006 1183981 - 1185243 + | Fe-S oxidoreductase-like protein Dole_1007 1185459 - 1186193 + | hypothetical protein TERM 1915 1186249 - 1186263 + F 73 -7.2 -4.24404 | AGCCCTGCAGATCCC CACAAA TTT TTTGTG TTTTCCCCTTTGAAT TERM 1916 1186270 - 1186289 + F 74 -6.5 -4.39133 | TTTTTTGTGTTTTCC CCTTTGA ATTGTG TCAAAGG TTTTAATAGTTATTA Dole_1008 1186496 - 1186840 + | helix-hairpin-helix repeat-containing competence protein ComEA TERM 1917 1186879 - 1186914 + F 100 -14.8 -4.21462 | opp_overlap 1186873 TTTTAACGATTGCAA GGCTCGAAGCGGTGTT TTAC AATACCGTCTCGAGCC TTTTGCATGATGGGT TERM 1918 1187091 - 1187142 + G 76 -5 -4.81083 | gap 1 TTCCCCGATTTTATC GGGTCCCGTTTCAGCAGGTCCTTCC CCT GGTAAT-CCTGCTGAAGCTGGCCTC TTTTTACTGGTTCGA Dole_1009 1186967 - 1188874 + | polysaccharide biosynthesis protein CapD TERM 1919 1189021 - 1189033 + G 88 -10.5 -4.42386 | overlap 1189026 AAACGATTCTTGTCA CCGGC GGC GCCGG TTTTATCGGTACCAA TERM 1920 1189205 - 1189215 + G 72 -4.6 -4.56597 | overlap 1189196 TCAGGACGGTGCCCT GCTG GAC CGGC TTTTTGCCGAAGAAC TERM 1921 1189282 - 1189297 + G 72 -4.6 -4.67982 | ACGTGGACCGCTCCA TCACCG ATCC CGGGGA TTTTGTTGAATCCAA Dole_1010 1188981 - 1190030 + | dTDP-glucose 4,6-dehydratase TERM 1922 1190252 - 1190274 + G 75 -4.1 -4.8048 | gap 1, overlap 1190255 CAGCGGCTGCTTGGG GACGGCTCCC AGTG GGGGGTC-TC TTTTTCCTATGCCGA TERM 1923 1190557 - 1190570 + G 85 -9.5 -4.55295 | TCCAAAGTCCAATTG GGCCG TGAC CGGCC TTTATTTCTACGACA Dole_1011 1190054 - 1190932 + | glucose-1-phosphate thymidylyltransferase TERM 1924 1191242 - 1191258 + G 90 -5.1 -5.4505 | overlap 1191241 GAACGGCACTTTCAT CTGCC AACCGGC GGCAG TTTTTTATTCCAAAG TERM 1925 1191269 - 1191287 + G 86 -4.4 -5.1861 | opp_overlap 1191273, overlap 1191272 1191273 GGCAGTTTTTTATTC CAAAGGGC TTT GCCCATGG TTTTTTGGTAGTAAG TERM 1926 1191446 - 1191468 + G 73 -12.8 -2.78154 | opp_overlap 1191411 1191430, overlap 1191444 ATGCGGCGGCGCCGA GTCTGAAGGA TAT TCCTTCAGGC TACTTGCCTGTATAC Dole_1012 1190935 - 1191498 + | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1927 1191704 - 1191722 + F 85 -10.2 -4.19953 | overlap 1191705 AAAACAACTGGGACT GCCCGCCT GAA AGGCGGGG TTTTAACCTTGACTG TERM 1928 1191705 - 1191721 + F 88 -13.7 -3.1149 | overlap 1191704 AAACAACTGGGACTG CCCGCCT GAA AGGCGGG GTTTTAACCTTGACT TERM 1929 1191786 - 1191776 - g 80 -2.4 -5.27769 | AGAAAAAATGAAAAA CGGC ATT GCCC CCCCTCACGGCGGAC Dole_1013 1191768 - 1193480 + | sulfate adenylyltransferase Dole_1014 1194156 - 1193509 - | ABC-type transport system auxiliary component-like protein Dole_1015 1195155 - 1194190 - | hypothetical protein TERM 1930 1194606 - 1194623 + g 72 -4.7 -4.71426 | overlap 1194606 CGGAGATGGTCTTGA CCTGGGC GTCT GCCAGGG TTTTATTGATCGCCG Dole_1016 1195964 - 1195203 - | ABC transporter-related protein TERM 1931 1195456 - 1195430 - G 71 -7.2 -4.2349 | GGTTTATATGCAAAA TCAGTTCGTCGA TCT CCGCCGCACTGA TCGGGTCCAGGCCGG TERM 1932 1195703 - 1195731 + g 91 -7.3 -5.31275 | opp_overlap 1195703 TCATGGAGCCGAACA GGGCGTTGTTCTG AAA CAGAACCCCGACC TTTTTTGTGATGGCG TERM 1933 1196007 - 1195980 - R 88 -12 -3.73953 | ATTATCCCCAGTAAA GCCGAATCAGTG CCAC CACCGAGTCGGC CAGTATGATAAAGAA Dole_1017 1197123 - 1195966 - | hypothetical protein TERM 1934 1196186 - 1196172 - G 78 -7.8 -4.41494 | CATCGTCAATGAAAA GCGCGT CCG ACACGC CTTCCAGGTAGGGTC TERM 1935 1197367 - 1197379 + r 81 -3.3 -5.36441 | CATTCCGCTTTGAGT GAGCA TGT TGCGC TTTTTTCTATACCAC Dole_1018 1198681 - 1197437 - | hypothetical protein TERM 1936 1198518 - 1198542 + g 80 -9.3 -4.18197 | overlap 1198508 CGGCCCCCGTCCCAC CGGTTGTCC CACAGCC GGGCAACCG TTTTCCATGAGGGGT Dole_1019 1199926 - 1198724 - | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 1937 1198888 - 1198900 + g 78 -4.1 -5.0133 | CGATGTCTTCGGCAA GGGTT TCA AACTC TTTTTTAAACCCGTA TERM 1938 1199061 - 1199089 + g 74 -12.5 -2.87146 | overlap 1199060 GTCAGGTTCAGCGGT TTTAATGCCGGCA GGT TGCCGGCCTTGAA CTTCTTATAGAGGAA TERM 1939 1199234 - 1199267 + g 80 -4.5 -4.90013 | gap 1 GCCTGTCCCTCTTGC CGCGGCTGCCAGGCTT TGA ATGT-TGGCATTCGCG TTTTTCCTTGCCTTG TERM 1940 1199502 - 1199514 + g 72 -4.7 -4.57837 | opp_overlap 1199486 1199510, overlap 1199503 CGGCCGGAGGCGTAA GCCGG AAA CCGGA TTTTTGCGGAGATGT Dole_1020 1201263 - 1199923 - | anaerobic glycerol-3-phosphate dehydrogenase subunit B TERM 1941 1200010 - 1199970 - G 73 -11.7 -3.06696 | overlap 1200001 GGGTGGCCGAATAGA TGCCCCGGGCGATGCGCCG GCC CGTCACATAGCCGGTGGCA ACGGCCACGCCGCCG TERM 1942 1200297 - 1200284 - G 72 -4.5 -4.64861 | overlap 1200285 CCTCCTGAAAAGAAA CTGCC GGTG GACAG CACATAAAACCCCGC TERM 1943 1200950 - 1200990 + g 74 -6 -4.51378 | overlap 1200952 1200972 TCATGGAGGGGCAGC CCGGCTCTGGCCATTTCC TGCCT GAAAAAGGCCAGGGCCTC TTTTATGGTGTCGAT TERM 1944 1200952 - 1200988 + g 87 -13 -3.8637 | overlap 1200950 1200972 ATGGAGGGGCAGCCC GGCTCTGGCCATTTCC TGCCT GAAAAAGGCCAGGGCC TCTTTTATGGTGTCG Dole_1021 1202908 - 1201250 - | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 1945 1202402 - 1202391 - G 79 -7.2 -4.64676 | opp_overlap 1202379 TGATCCTGAATAAAA CCGG TGAC CCGG GTGTGAGTCAGGATT TERM 1946 1202646 - 1202676 + g 90 -3 -5.78622 | opp_overlap 1202638, overlap 1202642 1202644 1202647 AGGGAAACGAACAGG CCGCCGGTCTCTTC GAT GCAGTGGCGGGCGA TTTTTTTTAAAATCC TERM 1947 1204268 - 1204250 - g 86 -5.9 -5.03314 | overlap 1204252 CGCATTTTTAAAAAA GGTGCCG GTGAT CGGCAGC AGCAGTCAGAATGTA TERM 1948 1204727 - 1204765 + G 72 -6.2 -4.32034 | gap 3, overlap 1204730 GAATCCGGTTTGTTA TGTGTTTCCCGG-CG-CAA ACGG TTGTCGTCCGGGAGAC-CA TTTTACTGCTGATCA TERM 1949 1204835 - 1204887 + G 100 -17.2 -3.68351 | opp_overlap 1204847, overlap 1204837 1204839 TCCGTTTGCCATGCC TCTGGTACAGAAGGCAGCAAACTG GACGA CAGTCTGCTGCCTTCTGTGCTGTA TTTGCCTGCTGGCCG TERM 1950 1204837 - 1204885 + G 100 -19.8 -3.42395 | opp_overlap 1204847, overlap 1204835 1204839 CGTTTGCCATGCCTC TGGTACAGAAGGCAGCAAACTG GACGA CAGTCTGCTGCCTTCTGTGCTG TATTTGCCTGCTGGC TERM 1951 1204839 - 1204883 + G 100 -22.4 -3.28122 | opp_overlap 1204847, overlap 1204837 1204835 TTTGCCATGCCTCTG GTACAGAAGGCAGCAAACTG GACGA CAGTCTGCTGCCTTCTGTGC TGTATTTGCCTGCTG TERM 1952 1204875 - 1204847 - g 88 -15.4 -3.48276 | opp_overlap 1204839 1204837 1204835 GCCTCTGGTACAGAA GGCAGCAAACTG GACGA CAGTCTGCTGCC TTCTGTGCTGTATTT Dole_1022 1203117 - 1204952 + | hypothetical protein Dole_1023 1206674 - 1205070 - | hypothetical protein TERM 1953 1205978 - 1205996 + g 95 -2.5 -5.82316 | overlap 1205980 GGCCGTAAGTCGTAC TGTTTTG AACGA CAAAATA TTTTTTTTGAGTAGT Dole_1024 1207730 - 1206807 - | beta-lactamase domain-containing protein TERM 1954 1207047 - 1207025 - G 100 -8.5 -5.14563 | gap 1, opp_overlap 1207030, overlap 1207046 CCTGCCAGGAAAAAA GCTGTTGCCG GTGG CGGCAA-AGC AGTTCAACGGCATTT Dole_1025 1209316 - 1207787 - | hypothetical protein TERM 1955 1208439 - 1208451 + g 80 -4.8 -5.02074 | GCCTGGTCGGTCATG GCGT CGGCA ACGC TTTTTTCAGCCATGA TERM 1956 1208771 - 1208785 + g 88 -10 -4.43221 | overlap 1208759 GGCCCACTGGTTTTC CTGACC GGA GGTCAG TTTTCTCAGCTCTTT TERM 1957 1208990 - 1209002 + g 80 -4.7 -4.98255 | overlap 1208968 1208991 CGCTTTTCGCGTGTC AGCGG TGG CCGCC TTTTTCTGCTTCAGC TERM 1958 1209343 - 1209364 + r 83 -6.5 -4.87389 | gap 1, overlap 1209345 TTTGAACCAGGGGGT TGCGGCGCGC AAA GCGC-CCGTG TTTATTTTTCAGATG TERM 1959 1209345 - 1209362 + r 78 -9.1 -4.04587 | gap 1, overlap 1209343 TGAACCAGGGGGTTG CGGCGCGC AAA GCGC-CCG TGTTTATTTTTCAGA Dole_1026 1211028 - 1209529 - | sodium:neurotransmitter symporter TERM 1960 1210084 - 1210072 - G 72 -4.8 -4.57073 | CAGGGCGCCGAAAAA GGTC ACGTA GACC GGCAGTTTGGCCAGG TERM 1961 1210138 - 1210120 - G 71 -8 -4.04318 | GGGATAGACGATAAA GGCCAGGC CAG GCCCCGCC TGGGAGACCTCCGTC TERM 1962 1210362 - 1210333 - G 81 -8.5 -4.36595 | overlap 1210336 1210338 1210339 TACGGAAAGGGAAAA GAATATCTGGCCG TAAG CGGCCAGCCATAC GTGGTAGTCGGTCAG TERM 1963 1210359 - 1210336 - G 81 -8.8 -4.29139 | overlap 1210333 1210338 1210339 GGAAAGGGAAAAGAA TATCTGGCCG TAAG CGGCCAGCCA TACGTGGTAGTCGGT TERM 1964 1210357 - 1210338 - G 72 -9.2 -3.73132 | overlap 1210336 1210333 1210339 AAAGGGAAAAGAATA TCTGGCCG TAAG CGGCCAGC CATACGTGGTAGTCG TERM 1965 1210356 - 1210339 - G 73 -12.7 -2.82253 | overlap 1210338 1210336 1210333 AAGGGAAAAGAATAT CTGGCCG TAAG CGGCCAG CCATACGTGGTAGTC TERM 1966 1211460 - 1211447 - R 83 -2.3 -5.5353 | overlap 1211455 CATACCAATAAAAAA GGAAG AAAC CTGCC GGTCAGGGGGACGTT TERM 1967 1211499 - 1211455 - R 81 -7.7 -4.54301 | overlap 1211447 TAAAAAAGGAAGAAA CCTGCCGGTCAGGGGGACGTT GTA AATGTCGCCCGAATGGGCAGG TGGTCGGAGTATCCT Dole_1027 1212506 - 1211463 - | endonuclease/exonuclease/phosphatase TERM 1968 1211643 - 1211678 + g 74 -2.4 -5.00616 | opp_overlap 1211649, overlap 1211645 GCCTTTTTTATCGTA AAGGGACCGGGGAACG AGCA TGTTGTCCGGGCTCTC TTTTTTCCCGAAGAA Dole_1028 1214875 - 1212746 - | DEAD/DEAH box helicase domain-containing protein Dole_1029 1215634 - 1214876 - | cobyrinic acid ac-diamide synthase TERM 1969 1215172 - 1215194 + g 74 -12.7 -3.01712 | TCAGCCTGTTTACGC CCTGGGCTG TGGCC CGGCCCAGG TGTTCCAGGCCGGCC TERM 1970 1215612 - 1215627 + g 84 -6.8 -4.80167 | overlap 1215614 TTTCCCACTCCGCCT TTGCCG CTGA CGGCGA TTTTCATTTTTCATG TERM 1971 1216442 - 1216466 + G 70 -5 -4.43815 | gap 1, opp_overlap 1216397, overlap 1216418 1216455 CCGCCGGACCTACAC CCAG-GGCC GGTCCGAG GGCCGCTGG TTTTCCTGTCTTGAT TERM 1972 1216936 - 1216947 + G 87 -7.2 -4.98255 | opp_overlap 1216913 1216914, overlap 1216904 1216922 GCGCTGTGCCCGCGG CCGG AACA CCGG TTTTTCTCATTGACC TERM 1973 1217066 - 1217038 - g 72 -8.8 -3.90744 | gap 2, overlap 1217039 CCTGCCGGGAAACAA CCTCGGCCGCACCG GAC CGG-GCGGCCC-GG CAGCGACGGCCGGCA TERM 1974 1217136 - 1217150 + G 73 -11.4 -3.42241 | opp_overlap 1217135, overlap 1217147 CCAAGGGGAAGGCAG GCCCAC AGT GTGGGC TTCTGGCTCTCTCTT Dole_1030 1215813 - 1217783 + | peptidase U32 Dole_1031 1218035 - 1218319 + | histone family protein DNA-binding protein TERM 1975 1218322 - 1218310 - f 74 -2.6 -5.0666 | GAGGGAAAAAATAAA CGGC AGTTA ACCG GCGTATTGCTGTCGC TERM 1976 1218740 - 1218727 - g 74 -8.1 -4.13014 | opp_overlap 1218733 1218733 1218735 CGGATACCTGGAAAA GGGGA AGGT TCCCC GCGACCCGTGGGGCA TERM 1977 1218733 - 1218759 + G 75 -5.9 -4.56358 | gap 2, opp_overlap 1218727, overlap 1218733 1218735 CCTGGAAAAGGGGAA GG-TT-CCCCGCG ACC CGTGGGGCAATCC TTTTGTCTACATGTG Dole_1032 1218416 - 1218877 + | general secretion pathway protein G TERM 1978 1218923 - 1218934 + F 93 -2.2 -6.15536 | gap 1 CCTTTCCCCCGTATA G-CCG TAC CGGTC TTTTTTTTGTTCCTT TERM 1979 1219175 - 1219161 - g 90 -11.4 -4.27316 | GTCCTCAAGTCAAAA GCGGTC ATG GACCGC CATCCCTACGTGCTT TERM 1980 1219327 - 1219282 - g 88 -15.3 -3.53012 | gap 1, opp_overlap 1219276 1219325, overlap 1219315 1219317 CGCTCGCCGGCCAAA CGCCGGAAGCC-GACGTCCCCG GCC CGGAGACCACAGGCACCCGGCG CCTGGCGCTTTCGGA Dole_1033 1218951 - 1219538 + | hypothetical protein Dole_1034 1219525 - 1219950 + | hypothetical protein Dole_1035 1219928 - 1220641 + | hypothetical protein TERM 1981 1220959 - 1220947 - g 72 -4.8 -4.56597 | opp_overlap 1220947 1220954 TTCCCCTTTGAAAAA GGGA GCCTG TCCC TTCGTATCACCGATT Dole_1036 1220638 - 1221723 + | Type II secretory pathway component PulK-like protein Dole_1037 1221777 - 1223237 + | fimbrial assembly family protein TERM 1982 1223315 - 1223333 + G 95 -6.6 -5.60993 | overlap 1223318 GCCGTCTGTATCGGG GTGGCGGC GGT GCTGCTGC TTTTTTTCTGGAAAG Dole_1038 1223234 - 1223788 + | hypothetical protein TERM 1983 1224443 - 1224432 - g 72 -5.8 -4.52589 | overlap 1224433 GGTGCGGATAGAAAA CTGC ACCG GCAG CGGCGAACAACTGGA Dole_1039 1223785 - 1224669 + | hypothetical protein Dole_1040 1224707 - 1225588 + | PDZ/DHR/GLGF domain-containing protein TERM 1984 1227336 - 1227324 - g 74 -6.2 -4.4773 | CCAGATCAACGAAAA CCGG CTGAT CCGG CTGGATATCGAACAG TERM 1985 1227875 - 1227865 - g 83 -8.2 -4.58395 | overlap 1227866 1227867 CCCATGCCGGAAAAA GCGG TGG CCGC CCCGGCTGCATCTGA TERM 1986 1227952 - 1227926 - g 100 -19.4 -3.53091 | AGCCTGTGCCTGAAA CCGCCCCGCCGG TGA CCGGCGGGACAG AGGCGGACGGGGAGA Dole_1041 1225639 - 1228038 + | general secretion pathway protein D TERM 1987 1229283 - 1229298 + G 71 -6.8 -4.11484 | GGTGCAGTCTGCCCT GACCGG CCAC CTGGTC TTTTCCACGCTTCAC Dole_1042 1228042 - 1229754 + | general secretory pathway protein E TERM 1988 1229794 - 1229804 + G 100 -6.8 -6.18768 | opp_overlap 1229790 1229793, overlap 1229790 1229789 CAACGACGAAACAGG CAGC CTG GCTG TTTTTTTTCTCTTTT TERM 1989 1229903 - 1229888 - g 90 -11.8 -4.21194 | opp_overlap 1229890 1229896 GGGGACTATTGAAAA CCCGGC AGCC GCCGGG GCAACGCCTTCCGGC Dole_1043 1229751 - 1230167 + | hypothetical protein Dole_1044 1230184 - 1231140 + | hypothetical protein Dole_1045 1232446 - 1231217 - | general secretion pathway protein F Dole_1046 1232903 - 1232505 - | hypothetical protein Dole_1047 1234366 - 1232942 - | hypothetical protein TERM 1990 1234639 - 1234652 + r 70 -8.1 -3.85698 | overlap 1234633 1234632 TTTTTTGTTCGGCAA CAGCG GTGC CGCTG TTTATGGCCGGACGG Dole_1048 1237098 - 1234654 - | response regulator receiver protein TERM 1991 1234868 - 1234883 + g 71 -6.8 -4.20883 | overlap 1234869 TTGGGCAGTCGCCAG TCGGTG TATC CACCGG TTTTGAGACTTTTTA TERM 1992 1235025 - 1235037 + g 81 -4.1 -5.14477 | overlap 1235026 CCAGGTACCGGCCTT TTGTC GCC GACAG TTTTTTGCGTATCTC TERM 1993 1236113 - 1236103 - G 74 -2.4 -5.00616 | CCTGGCTTCAAAAAA CCAG AGG CAGG CAAGGATCAGGAGAA TERM 1994 1236400 - 1236411 + g 84 -3.6 -5.32608 | overlap 1236389 GGCGGCCTTTTGAAT GGCG ATTT TGCC TTTTTTGGGTTTTTT TERM 1995 1236498 - 1236514 + g 74 -2.2 -4.87328 | overlap 1236500 CAGTAATCTCTTTTT TCCGGT CCGGC ACCGCA TTTTCTATTTCTATG TERM 1996 1236563 - 1236581 + g 71 -11 -3.18571 | opp_overlap 1236561 1236559, overlap 1236561 1236559 1236557 AGGATCTCAAACACC GCCTCTTC ACC GGAGAGGC TGTCTGTTTCCGCCG TERM 1997 1236603 - 1236631 + g 100 -3.2 -5.83226 | gap 1, opp_overlap 1236618, overlap 1236603 1236616 TTTCCGCCGCAATCA GGGC-GCCTTT GACAAGAA AAAGGTGGCCC TTTTTTTCTTCGGTT TERM 1998 1237238 - 1237225 - H 73 -5.2 -4.56775 | opp_overlap 1237234 AGCTGCCGCGAAAAA GGGC GGTGCG GCCC GGCATAAAGGCCTTG TERM 1999 1237324 - 1237306 - H 73 -2.4 -5.02074 | overlap 1237307 GTACCGGTCAAAAAA TTTCTGCT TGG AGCAAGAA TGAACAAACTCGTCA TERM 2000 1237459 - 1237470 + G 83 -4.4 -5.08255 | opp_overlap 1237459 CTGGCAAGAAAAATG CTGT TCAA ACAG TTTTCTTTTGCCGGT Dole_1049 1237324 - 1238313 + | hypothetical protein TERM 2001 1238834 - 1238814 - g 71 -8.2 -4.08692 | opp_overlap 1238828, overlap 1238817 GAAGGCGGCGGAAAA GATGCGGG GGCTG CCCGCCTC CGATGCGGTTGTGCG Dole_1050 1238335 - 1238991 + | hypothetical protein Dole_1051 1239359 - 1239000 - | type IV pilus assembly PilZ TERM 2002 1239646 - 1239635 - H 75 -5.8 -4.62069 | overlap 1239644 CCGGTATGCGAAAAA CGGT GAAA ACCG GCAGACCGGTCCGAT TERM 2003 1239655 - 1239644 - H 73 -7.2 -4.20883 | overlap 1239635 GAAAAACGGTGAAAA CCGG CAGA CCGG TCCGATATTCTTTCC TERM 2004 1239706 - 1239717 + H 73 -7.2 -4.16016 | opp_overlap 1239697, overlap 1239697 1239708 AAAATCGCCTGTTAT CCGG CTTT CCGG TTTGTTGACGCATGC TERM 2005 1239879 - 1239868 - g 71 -7.2 -4.13767 | GCTTGCAGGGCAAAA CGGG TGGA CCCG GAAGCAGACGTCTAT TERM 2006 1240904 - 1240925 + G 83 -5.1 -5.0916 | gap 1, overlap 1240904 1240905 CCGTTGGCATTCAGG TG-GCCCAGT TTG ACCGGGCCCA TTTTTATATTGAAAA TERM 2007 1241396 - 1241374 - g 83 -9.8 -4.32607 | opp_overlap 1241372, overlap 1241376 1241393 CCAAAAGGCAAGAAA CTGGTGCTGC TCT GCAACACCGG GGTCCGTTCCTACGA Dole_1052 1239802 - 1241517 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2008 1241586 - 1241561 - f 73 -3.2 -4.86731 | GCTTTTTAAACAAAA GGAGACGACA TGCGGT TGTCAACCCC CCGGATTCCACCGGC Dole_1053 1241570 - 1242133 + | carboxymuconolactone decarboxylase TERM 2009 1243019 - 1243049 + G 84 -2.5 -5.44721 | gap 1, overlap 1243019 1243021 AAACGGGTAACAGCC TT-CTGGCCTCCAT GGGA ATGGTGGCCCGTGA TTTTTTTGCCATGGT TERM 2010 1244023 - 1244055 + G 72 -5.3 -4.41348 | opp_overlap 1244022 AGGGAATTTTTAAAC CGCCGTTTCGAGGGC CAG GCCTACGGCGCGCCG TTTATTTCCGGCGGC TERM 2011 1245270 - 1245253 - g 100 -5.5 -5.75945 | ACCCTGCAAAAAAAA GGCAATG CGTC CATGGCC CTGGACCGGGCACTT Dole_1054 1242199 - 1245456 + | exodeoxyribonuclease V, gamma subunit TERM 2012 1245667 - 1245641 - g 78 -8.7 -4.11472 | gap 1, opp_overlap 1245659, overlap 1245659 CTGAAAGGAAAAATA CG-GACCGCCCT GCGA AAGGCGGCCACG GCTTTCAAAACAGGG TERM 2013 1245755 - 1245735 - g 71 -8.1 -3.95674 | overlap 1245736 AAAAGCGGGAAACAA CGCGGGCGG TGG CGGCCCGCC GCCTGAAACGGGCAC TERM 2014 1246653 - 1246664 + G 100 -7.2 -5.96219 | overlap 1246651 CGTCCCTGTTTCAGG GGGC GTCC GCCC TTTTTTTTATCGGTG TERM 2015 1246803 - 1246840 + G 72 -6.1 -4.32857 | gap 1, opp_overlap 1246815, overlap 1246823 GTGCCGGCCTGGTGA CGG-GCGTCAACACCCTG TTC CAGGCGGTAGCCGCGCCG TTTGTGTTTGACGAG TERM 2016 1247387 - 1247403 + G 75 -10.1 -3.74519 | CTGTCATACCGGGAT CTGTGGC GGC GCCACGG TTTCATGAAGATGTT TERM 2017 1248678 - 1248689 + G 70 -2.2 -4.79949 | GGGGGGTGATGCGGG GGTT TGTC GACC TTGTTTTTTTCAGCG Dole_1055 1245434 - 1249045 + | exodeoxyribonuclease V, beta subunit Dole_1056 1249047 - 1250876 + | exodeoxyribonuclease V, alpha subunit Dole_1057 1250892 - 1251338 + | RpiB/LacA/LacB family sugar-phosphate isomerase Dole_1058 1252050 - 1251379 - | CheC, inhibitor of MCP methylation TERM 2018 1251775 - 1251753 - G 71 -6.9 -4.10007 | AGAACTTGCTTAAAA TCCGCTCCG TGCCC CGGGGCAGA AACAGCAGGCCGGAT TERM 2019 1252027 - 1252015 - G 90 -4.7 -5.40072 | TTCTTCTGAAAAAAA GTCGC TCC GCGGC CCCCCCGCTCCCCCG Dole_1059 1252426 - 1252043 - | response regulator receiver protein TERM 2020 1252100 - 1252114 + g 76 -3.4 -5.02476 | AGCCTCTTCGATGAC CTGGGC TTT GGCCGG TTTTTTGAGCAGTGT TERM 2021 1252144 - 1252134 - G 74 -8.2 -4.15565 | TTGAGCAGTGTAAAA GCGC CCA GCGC CATGACGTTTGAAAT TERM 2022 1252510 - 1252520 + r 85 -5.4 -5.18371 | CACGGGTCAATATAT TAGG TAA CCTA TTTTATTTTATGGAA Dole_1060 1253612 - 1252647 - | peptidase M23B TERM 2023 1252743 - 1252775 + g 77 -2.5 -5.03715 | overlap 1252736 1252745 GGCCGGAGTTCCGTT GCCGGGATTATCGAC AAA GCCGATGGGCTCGTC TTTTTTAACGGTGCT TERM 2024 1253940 - 1253956 + G 83 -7.9 -4.70659 | ATCCACGACGGGCGA CCATGCC CGA GGCCTGG TTTTTGGATGTGGAA TERM 2025 1254174 - 1254213 + G 100 -15 -4.67038 | gap 1 GGTGGTCCGGCGGCA GTCCCACGG-TGTCGGCCA TGC TGGCCGACAGCCGCGCGGC TTTTCGTTTTGCCAG TERM 2026 1254256 - 1254279 + G 77 -12.4 -3.48276 | opp_overlap 1254255 AGAAAAGGGATATAC CGGCCCGTGG ATCG TCATGGGCCG TTCTCTGGGCAGCGC Dole_1061 1253861 - 1254691 + | temperature sensitive supressor-like protein TERM 2027 1255294 - 1255304 + G 84 -2.4 -5.4505 | opp_overlap 1255286, overlap 1255291 GAAAAGACGCGGTTC CGCC GCG GGAG TTTTTTCTTAACCCG TERM 2028 1255667 - 1255655 - g 90 -6.9 -5.04265 | AAAAAAGACCAAAAA GGAGC GGG GCCCC AAAGATGAGATCCGC TERM 2029 1256265 - 1256275 + G 89 -4 -5.52986 | AACCCGGCCTCCTAT TTCA GCC TGAA TTTTTTTGATCCCAT TERM 2030 1256518 - 1256528 + G 77 -8.2 -4.32857 | TCTGCTATGTGGACG GGCC CCC GGCC TTTCTGTTTGACGGC TERM 2031 1256600 - 1256655 + G 78 -3.2 -5.03145 | gap 1, opp_overlap 1256606 1256608, overlap 1256601 1256603 1256606 CCGGCTCTCCAGCTG CG-ACAAGATGCTGCGCACCCGTTTTT CAA AAAAACGGGGGCCCTTCAACCTGTATG TTTTTTCCGCCATTG Dole_1062 1254738 - 1257002 + | hypothetical protein TERM 2032 1257516 - 1257478 - g 71 -10.3 -3.57144 | gap 1, opp_overlap 1257466 GCTTTCAGCCGGAAA CTGGCCGGATTTCGAGCC ATTG GGCCGGACATCC-GCCAG TCCATGGAGAAGATT Dole_1063 1257262 - 1258443 + | 2-methylcitrate synthase/citrate synthase II TERM 2033 1259125 - 1259155 + G 76 -4.4 -4.8667 | opp_overlap 1259102, overlap 1259104 GGGCCCTGGCCCTGG GCGCTTTGGCCGCC AAT GTCCGCCTCGGCGC TTTTTATCCCATGTC TERM 2034 1259735 - 1259719 - g 75 -10.1 -3.64822 | opp_overlap 1259706 ACGCCCTGACCGAAA CCGGGAT ATC ACCCCGG GCGCTTCCCTGTGCC Dole_1065 1258794 - 1260233 + | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 2035 1260692 - 1260716 + G 74 -6.9 -4.37886 | overlap 1260703 CGTTCAACCCCCTGA CCGTGGCCCTG GCC CTGGGCGCCGG TTTTGTGGCCCGTGG Dole_1066 1260226 - 1261083 + | pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit Dole_1067 1261831 - 1261223 - | TetR family transcriptional regulator TERM 2036 1262265 - 1262225 - H 91 -4.2 -5.63504 | opp_overlap 1262215 1262225 AATTCCAGAAAAAAA TTAGTTGACAGACTAA TTTTTTTTG TTAGTCAACCAACTAA TAAACACAAAAACCA TERM 2037 1262225 - 1262240 + H 95 -2.6 -6.13503 | opp_overlap 1262225, overlap 1262215 AATTCCAGAAAAAAA TTAGTT GACA GACTAA TTTTTTTTGTTAGTC Dole_1068 1262321 - 1263436 + | alanine dehydrogenase Dole_1069 1263456 - 1264373 + | amidohydrolase 2 TERM 2038 1265490 - 1265473 - g 72 -5.5 -4.50058 | TATTCAGAACGAAAA TCCGGGA CAGA TCCTGGA AGTCCGCGGCCGGGG Dole_1070 1264439 - 1265821 + | aminotransferase class-III TERM 2039 1266408 - 1266396 - g 73 -3.3 -4.81685 | overlap 1266389 ATCAATCACCAAAAA GACGG CGG CTGTC ATCCTGGAGCCGGTT TERM 2040 1266455 - 1266438 - g 72 -6.3 -4.29139 | gap 1, overlap 1266428 TCAAACGGAAAACAA TTG-CCGC ACC GCGGACAA GGATTACCTCGTTGC Dole_1071 1265851 - 1267059 + | aminotransferase class-III Dole_1072 1267101 - 1267739 + | NADPH-dependent FMN reductase TERM 2041 1268921 - 1268942 + G 71 -10.1 -3.50853 | ACGGCCATTTGTGGA CGGCTCCTG GTCC CAGGAGGCG TTGTGATTCCGGGGA Dole_1073 1267973 - 1270480 + | molydopterin dinucleotide-binding region Dole_1074 1270566 - 1272719 + | molybdopterin oxidoreductase TERM 2042 1272941 - 1272959 + G 78 -3 -5.06816 | opp_overlap 1272940 1272953, overlap 1272943 1272953 1272954 GAAACAAAATACAGC GACAGGAT TGA ACCCTGCC TTTTTCTTGGCAGGT TERM 2043 1273680 - 1273667 - g 78 -6.7 -4.62069 | opp_overlap 1273667 TGGGTATGCGAAAAA GCCAT GGAC ATGGC TGGATTCAACATGAA TERM 2044 1273847 - 1273835 - g 70 -4.7 -4.43877 | GAATTGTTAAAGAAA GGGCC GCC GGCGC CTGATCATCCAAACA Dole_1075 1272716 - 1273942 + | hypothetical protein TERM 2045 1274222 - 1274209 - f 77 -3.9 -5.06451 | TACGAGGTGAAAAAA TATGA CAAG TCATA AGCAGGTCAGCGCTT Dole_1076 1274210 - 1275622 + | amidase TERM 2046 1275704 - 1275653 - T 75 -5.4 -4.7329 | gap 1, opp_overlap 1275656 1275657, overlap 1275656 1275657 AAAACCACCGAAAAA CAAG-GCCTAGAGTGCCCTTTTT ACCCCTG AAAAAGGACATTCTAAGCTCTTT ATTATGGAAGGCGAA TERM 2047 1275700 - 1275656 - T 76 -7.3 -4.4521 | opp_overlap 1275656 1275657, overlap 1275653 1275657 ACCACCGAAAAACAA GGCCTAGAGTGCCCTTTTT ACCCCTG AAAAAGGACATTCTAAGCT CTTTATTATGGAAGG TERM 2048 1275657 - 1275699 + T 71 -8.6 -3.75817 | opp_overlap 1275656 1275653 1275657, overlap 1275656 CCACCGAAAAACAAG GCCTAGAGTGCCCTTTTT ACCCCTG AAAAAGGACATTCTAAGC TCTTTATTATGGAAG TERM 2049 1275699 - 1275657 - T 76 -10.8 -3.26042 | opp_overlap 1275657 1275656, overlap 1275656 1275653 CCACCGAAAAACAAG GCCTAGAGTGCCCTTTTT ACCCCTG AAAAAGGACATTCTAAGC TCTTTATTATGGAAG Dole_1077 1276119 - 1275814 - | hypothetical protein Dole_1078 1276490 - 1276879 + | hypothetical protein TERM 2050 1278262 - 1278283 + T 88 -7.1 -5.08011 | opp_overlap 1278260 1278255 1278251 GAAATGAAGCAATCC CGGGAGCCG GATA CTGCCCCCG TTTTTTGCCCGTTTT Dole_1081 1279562 - 1278372 - | diguanylate cyclase Dole_1082 1281432 - 1280137 - | hypothetical protein TERM 2051 1280696 - 1280649 - G 91 -6.9 -5.24796 | opp_overlap 1280679 GCCACACAAGAAAAA TCCCCGCGCACAGGGAAACCA CCAGGC CGGTCTCCTTGGCCACGGAGA GTTTGGGAAACCCCA TERM 2052 1281326 - 1281304 - G 88 -5.4 -5.31275 | overlap 1281306 CGGCAGCATAAAAAA CAGGGCCACC AGC AGTGCCCCGG CCAGAAAGGCGGATG TERM 2053 1281324 - 1281306 - G 72 -6.6 -4.29153 | overlap 1281304 GCAGCATAAAAAACA GGGCCACC AGC AGTGCCCC GGCCAGAAAGGCGGA Dole_1083 1282953 - 1281469 - | hypothetical protein TERM 2054 1281643 - 1281653 + g 74 -2.4 -5.00616 | opp_overlap 1281644 TGTTCCCAGAGAAAA ACGG CCT CCGG TTTTTTGCAGAAAGC TERM 2055 1281670 - 1281644 - G 78 -3.6 -4.96848 | opp_overlap 1281643 1281669, overlap 1281667 GTTCCCAGAGAAAAA CGGCCTCCGG TTTTTTG CAGAAAGCCG GTCACCACCGTCTTG TERM 2056 1282137 - 1282110 - G 78 -11.2 -3.68351 | opp_overlap 1282113 1282114, overlap 1282114 TTTCCAGCAGGGAAA GATAGGCAGCCG TCTC CGGCCGCCTGCC GTTGGCGCCGGCCTG TERM 2057 1282162 - 1282114 - G 79 -13 -3.28122 | gap 2, opp_overlap 1282114 1282113, overlap 1282110 CAGCAGGGAAAGATA GGCAGCCGTCTCCGGCCGCCTGCC GTT GGC-GCCGGCCTGTGCCG-CTGCC CTTTGGGAGTAGGTG TERM 2058 1282114 - 1282162 + g 73 -13 -2.74461 | gap 2, opp_overlap 1282110 1282114, overlap 1282113 CAGCAGGGAAAGATA GGCAGCCGTCTCCGGCCGCCTGCC GTT GGC-GCCGGCCTGTGCCG-CTGCC CTTTGGGAGTAGGTG TERM 2059 1282982 - 1282992 + H 93 -8.2 -5.02502 | CCATGGATGGTTGGA CGGC TGT GCCG TTTTTATCTGCTATC TERM 2060 1283610 - 1283575 - g 74 -12.5 -2.90763 | opp_overlap 1283571 CCCATATCGGATACA CGCCCCAGACCTCGG GCAAGG CCGCGGTCCAGGGCA AGGATATTGACCGGG Dole_1084 1283163 - 1283996 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 2061 1284893 - 1284911 + G 90 -10.2 -4.56978 | CGAGGATGTGGCCTG CCGGTACC AGC GGTTCCGG TTTGTTGTTTACAGC Dole_1085 1284240 - 1284947 + | methyltransferase type 12 Dole_1086 1285193 - 1285966 + | enoyl-CoA hydratase/isomerase Dole_1087 1288411 - 1285985 - | TPR repeat-containing protein TERM 2062 1286115 - 1286125 + g 76 -3.2 -4.98531 | overlap 1286081 GGAGCGGTCTTTTGA TTGG CCG CCAG TTTTTCCTTTAAGGC TERM 2063 1286610 - 1286591 - G 77 -7.8 -4.29907 | overlap 1286592 ACAGCAGAACACAAA CCCGGCTT CCGG AAGCCCGG CATCGGACCGGGTCA TERM 2064 1288038 - 1288062 + g 71 -7.7 -4.09739 | overlap 1288045 AAGGTTTTTGCCTCA TCTGCGCGGCC GGC GGCCTTGCTGA TTTTGCCCAGGTTGA TERM 2065 1288174 - 1288217 + g 74 -11.2 -3.54543 | gap 2, opp_overlap 1288187, overlap 1288165 1288163 1288147 1288172 1288187 1288216 GCAGCACCTGGCCCA GGCTGTTGTGAAAGGCGGCC TGTTTC GGC-GCCTTTT-CAACGGCC TTTCGCAGGGTGCCT TERM 2066 1288388 - 1288402 + g 81 -2.8 -5.1861 | GGCCTTATTGAACAG GGTAAG AGA CTTGTC TTTTTTCATGGTCGC TERM 2067 1288452 - 1288424 - R 83 -11.8 -3.53224 | gap 1, opp_overlap 1288419 1288418, overlap 1288425 CATGGTCGCCTGAAA TGGGATGCCGGGC TTTT ACCCGGCATCC-A GTTGGAATTGATTTT TERM 2068 1288452 - 1288425 - R 84 -13.4 -2.71791 | opp_overlap 1288419 1288418, overlap 1288424 ATGGTCGCCTGAAAT GGGATGCCGGGC TTTT ACCCGGCATCCA GTTGGAATTGATTTT TERM 2069 1288490 - 1288505 + r 91 -6.8 -5.18866 | TCCACCCGGCCCGCC CGGCAG ACTG TTGCCG TTTTATTTGTTTAGC Dole_1088 1289710 - 1288694 - | hypothetical protein Dole_1089 1290216 - 1289707 - | hypothetical protein Dole_1090 1292753 - 1290213 - | response regulator receiver protein TERM 2070 1291566 - 1291598 + g 79 -5.3 -4.77757 | opp_overlap 1291559 1291557, overlap 1291567 GTTAAATACCCGGTC GCCCAGGTTGGCAAC AAA GCCGCCGTCCTGGGG TTTTCGTTTTTCCGC TERM 2071 1292230 - 1292250 + g 72 -6.1 -4.26475 | opp_overlap 1292224, overlap 1292222 GTATAGATATCCGCT GCGGTTGTT TCG AAAAGCCGC TCTTTTTTATCCGGT TERM 2072 1292480 - 1292521 + g 70 -3.7 -4.62336 | GGGCACGGTCTTTCT CTTCTTCCATGGCGGTG AGAAAAAC CACCGGAATGAAAGAGG TTTTTGGGGTCGCCT Dole_1091 1293106 - 1292870 - | hypothetical protein Dole_1092 1293439 - 1293113 - | response regulator receiver protein Dole_1093 1298589 - 1293424 - | multi-sensor hybrid histidine kinase TERM 2073 1294438 - 1294467 + g 86 -4.9 -5.252 | ATGAGACGGTGTGCC GGGTTCGATGTCA TAAA TGAGTTCGATCCC TTTTTTGTGGGCCTG TERM 2074 1297038 - 1297060 + g 83 -7.6 -4.62069 | opp_overlap 1297026 1297021 1297038 1297040, overlap 1297040 1297052 GAACGGGGTAGTAAA TATCCCGGCC TGT GGCCGGCATC TTTTTGCCGTCGGCG TERM 2075 1297040 - 1297058 + g 77 -10.2 -3.92746 | opp_overlap 1297026 1297021 1297038 1297040, overlap 1297038 1297052 ACGGGGTAGTAAATA TCCCGGCC TGT GGCCGGCA TCTTTTTGCCGTCGG TERM 2076 1297953 - 1297975 + g 74 -6.2 -4.54047 | GCCGGTCCCGGCCAT GGGCGTGG TAAAAAT CCACGGCC TTTTGTATCAGGTCC TERM 2077 1298199 - 1298235 + g 79 -5.2 -4.8048 | gap 1, opp_overlap 1298211 CCAGCCGGTCATCCT GAGTGTCCAGAAGAAAA AAGA TTTTCGTC-GGTCGCTC TTTTTGCTCTCCCGA TERM 2078 1298631 - 1298659 + r 81 -3.2 -5.38047 | overlap 1298628 1298633 1298636 TGGCTGTGGTGTTGT C-ACGCCGGACATA ATT TATGCCCG-CGTTG TTTTTTCTCTGGATA TERM 2079 1298633 - 1298656 + r 78 -6 -4.77122 | gap 1, overlap 1298628 1298631 1298636 GCTGTGGTGTTGTCA CGCCGGACATA ATT TATGCCCG-CG TTGTTTTTTCTCTGG Dole_1094 1300686 - 1298905 - | TrkA domain-containing protein TERM 2080 1299068 - 1299056 - G 72 -6.2 -4.37092 | ACCGGCGTCAGAAAA GCGC AGGAG GCGC CCACGGCCACGGCCA TERM 2081 1300414 - 1300432 + g 86 -11.7 -4.07568 | GGCCGCCACCTGAAG GGTGGGC CGGTT GCCCACC TTTTCCAGCAGCCGG Dole_1095 1300954 - 1301718 + | NERD domain-containing protein TERM 2082 1302116 - 1302104 - g 78 -4.1 -5.01732 | overlap 1302106 AACCCGGTCAAAAAA CACGA CGA TCATG AGCGCCGTTCATGCG TERM 2083 1302731 - 1302719 - g 72 -5.5 -4.5464 | opp_overlap 1302719 TATATATAAGGAAAA CGGTA TGA CACCG TTAATGGAAGTGTCT TERM 2084 1304581 - 1304593 + G 91 -6.9 -5.28481 | opp_overlap 1304576 1304581 ACACAGTCAACCGAA GCGGG GCG TCCGC TTTTTTACTTGCATG Dole_1096 1301718 - 1304903 + | ankyrin Dole_1097 1307236 - 1305011 - | para-aminobenzoate synthase, subunit I TERM 2085 1305433 - 1305449 + g 90 -5.1 -5.38054 | opp_overlap 1305433 GGGGTTCGGGGTAAA GGGCA AGGTCAA TGCCC TTTTTGTTTATCAGG TERM 2086 1306110 - 1306148 + g 71 -8.2 -4.09739 | gap 2, opp_overlap 1306106 1306118 CCGGTAATCGACCCG CCGGGA-AAGGC-GGCCT CGACA AGGTCTGCCGTGTCCCGG TTTTGGGCCAGTTCG Dole_1098 1307876 - 1307241 - | glutamine amidotransferase of anthranilate synthase TERM 2087 1307910 - 1307884 - R 100 -18 -5.60993 | opp_overlap 1307878 1307876 TCGCCCATAAAAAAA CGCCACCCGGAC AGA GTCTGGGTGGCG TTGGCCTATTACATA Dole_1099 1310448 - 1307995 - | ATP-dependent protease La TERM 2088 1308624 - 1308640 + g 85 -9.3 -4.41548 | opp_overlap 1308624, overlap 1308627 CCAGGCCCATGACAA CGCCCGG GGT CAGGGCG TTTTCTCCGGTCTCG TERM 2089 1308858 - 1308868 + g 90 -8.2 -4.88918 | AGGAGATATGTTTCG CGGC CAG GCCG TTTTCTTTCCGCTGC TERM 2090 1309842 - 1309873 + g 73 -2.8 -4.84311 | overlap 1309848 CCTTTTTCAGCCGCA GCTTCACATCCAGG GTTT CCAGGATGTTCTGC TTTTCTTCTGTAGAA TERM 2091 1310518 - 1310542 + r 76 -9.3 -3.90048 | overlap 1310528 TTGACCAGTGGGGTC TACCGGTCAAG ATG CCTGATCGGTA TCTTTTTAGACCCGG Dole_1100 1310969 - 1310517 - | heat shock protein Hsp20 TERM 2092 1310679 - 1310697 + g 71 -7.3 -4.11484 | opp_overlap 1310662 GCCGTACTGGATTTC GGCCAGG CAGAA CCGGGCC TTTTCAACGCTTACC TERM 2093 1311022 - 1311049 + H 73 -9.8 -3.29511 | gap 1 TTCTGTTCCGGCATG CCGTCA-ACCGGG GCG CCCGGCCTGGCGG TTATGCCGGGGTGCA TERM 2094 1311405 - 1311419 + G 86 -3.4 -5.50499 | AGGCCGCACCCTCAG GGGCCG AGC TGGACC TTTTTTTAAGTGTGC TERM 2095 1311556 - 1311586 + G 77 -8.1 -4.3739 | overlap 1311559 1311574 TCCGTTCTGCCCCCA GGTGGCCGGTCCC CTGCT GGGCCTGGCCCTC TTTTGTCCGAAGCTC Dole_1101 1311170 - 1312126 + | hypothetical protein TERM 2096 1312905 - 1312925 + G 88 -13.9 -3.63627 | ACGGCCCTGGCCCAG GGCGCGGCC GGA GGCCTCGCC TTTGCCATCTGCGGA TERM 2097 1313150 - 1313165 + G 78 -3.2 -5.15117 | GGGCGGGGCCGGAAT GAGCAC GGTG GTGATC TTTTTTGCCATTTTA Dole_1102 1312212 - 1313309 + | hypothetical protein Dole_1103 1314731 - 1313895 - | cytochrome c assembly protein Dole_1104 1316146 - 1314773 - | ResB family protein TERM 2098 1314985 - 1314959 - G 86 -12.2 -4.00038 | opp_overlap 1314959 1314958 GATCATCAGGATAAA CCCGGCATACAC CAG GGGCACGCCGGG GTCTTTGGCCACCTG TERM 2099 1315693 - 1315682 - G 71 -7.2 -4.1043 | opp_overlap 1315682 GGCAAACAGCAGAAA GCCG TTGT CGGC CGGCTGGTGTACCAC TERM 2100 1315708 - 1315720 + g 83 -7.7 -4.56597 | CCGGCTGGTGTACCA CGGTT GAA AACCG TTTTTCCAGAAAGGC TERM 2101 1315945 - 1315975 + g 73 -11.1 -3.39595 | overlap 1315972 GGTACATGTCGTCGA TCTGGAGCATGGC GATGA GCCGTGCCCCGGA TTCTCCGTACTTGGC TERM 2102 1316279 - 1316265 - H 89 -12.8 -3.53012 | opp_overlap 1316264 1316263 1316261 CCGGTCTGCCTGAAA GGCGGC TGT GCCGCC AGTGTTCATTGTACA TERM 2103 1316769 - 1316811 + G 81 -8.9 -4.32857 | GCCCGGTGTATCGGC GGCGGTGGCGGCCCTGTCG GTAAG CGGCATGCCCACCGACGCC TTTGTGTTTACCGGC Dole_1105 1316419 - 1317258 + | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 2104 1317558 - 1317542 - f 75 -3.7 -5.08169 | ACATACGTTAAAAAA TGAATGA GTT TCATACA GTTCCCTGTAAAAAT TERM 2105 1317616 - 1317636 + F 83 -6.7 -4.86731 | overlap 1317619 TTTTAATTTGCCGCT CACCCGGCC GAC GGCGGGTTG TTTTGTTTGCCGGCC TERM 2106 1317619 - 1317633 + F 80 -7 -4.54026 | overlap 1317616 TAATTTGCCGCTCAC CCGGCC GAC GGCGGG TTGTTTTGTTTGCCG TERM 2107 1318295 - 1318310 + G 78 -8.2 -4.42062 | TGTAAAGGTGGTTCA GGCCGG TCTG CCGGTC TTTATTTCCGCCATG TERM 2108 1318780 - 1318751 - g 71 -7.1 -4.10657 | gap 1, opp_overlap 1318774, overlap 1318753 TGAGATTCTGGAAAA TACCACCCCGGACG ATG CACCCGCGGTGG-A GATGCCGGTTTACGA TERM 2109 1318779 - 1318753 - g 81 -12.2 -3.64984 | opp_overlap 1318774, overlap 1318751 AGATTCTGGAAAATA CCACCCCGGACG ATG CACCCGCGGTGG AGATGCCGGTTTACG Dole_1106 1317639 - 1318892 + | trimethylamine:corrinoid methyltransferase-like protein Dole_1107 1318937 - 1320550 + | asparagine synthetase B TERM 2110 1320562 - 1320525 - f 73 -9.9 -3.29544 | gap 1, overlap 1320523 1320521 1320534 AGCACGAAGAAGAGA CCGACGACACCTCTCAGG TGG CCTGAGAAGCGGCAT-GG AACTGACCATTCTGG TERM 2111 1320554 - 1320534 - f 76 -11.9 -2.82759 | overlap 1320525 1320523 1320521 AAGAGACCGACGACA CCTCTCAGG TGG CCTGAGAAG CGGCATGGAACTGAC TERM 2112 1320756 - 1320772 + G 86 -12.3 -4.08216 | opp_overlap 1320726 CCGGGAGTCCATCGG GCAGGTG GAT CACCTGC TTTTCACCCACCTGG Dole_1108 1320559 - 1321407 + | hypothetical protein Dole_1109 1321425 - 1322657 + | trimethylamine:corrinoid methyltransferase-like protein Dole_1110 1322680 - 1323306 + | cobalamin B12-binding domain-containing protein Dole_1111 1323353 - 1324786 + | trimethylamine methyltransferase Dole_1112 1324801 - 1325751 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Dole_1113 1326327 - 1325752 - | transcriptional regulator, TrmB TERM 2113 1325785 - 1325801 + g 85 -3.5 -5.40072 | overlap 1325778 1325777 1325786 1325787 TGCCTTTCCGGGGCG GCCCCGC TTT GCGGGCA TTTTTTTCGGCGGGG TERM 2114 1325978 - 1325966 - G 78 -7.7 -4.43221 | overlap 1325968 AAAGACTCGATAAAA TGCTG CTG CAGCA GGGGAGGGGCCTTTT Dole_1114 1326613 - 1326335 - | HNH endonuclease Dole_1115 1327476 - 1326637 - | RimK domain-containing protein ATP-grasp TERM 2115 1326805 - 1326818 + g 86 -6.7 -5.00616 | CAGGTCAAAGCCGGC CAGGT TGAT ACCTG TTTTTTCGCAGACCG TERM 2116 1326936 - 1326919 - G 81 -12.7 -3.60296 | GATGTTCACGGCAAA GCCGGTG GTGG CACCGGC CACCCGCCAGTAGGC TERM 2117 1327153 - 1327174 + g 75 -12.3 -3.24232 | opp_overlap 1327143 1327152 1327151 1327155, overlap 1327156 GACCAGAGGGAAATC CAGGGACGG TCTT CCGTCCTTG TGTGTTTCGGAAAAC TERM 2118 1327156 - 1327171 + g 75 -10.4 -3.76232 | opp_overlap 1327143 1327155 1327152 1327151, overlap 1327153 CAGAGGGAAATCCAG GGACGG TCTT CCGTCC TTGTGTGTTTCGGAA TERM 2119 1327284 - 1327246 - G 86 -11.8 -4.09685 | gap 1, opp_overlap 1327250 CCCGATTTTGGAAAA CAGTTCGGCCTGGCCGA TTTTGC CCGGCCAGGC-AAACCG CGTGGAAAAATCGGG TERM 2120 1327250 - 1327262 + g 75 -9.1 -4.07568 | opp_overlap 1327246 ATTTTGGAAAACAGT TCGGC CTG GCCGA TTTTGCCCGGCCAGG TERM 2121 1327367 - 1327392 + g 78 -3.8 -4.88228 | overlap 1327351 1327349 1327368 GCCTGGTGCAGGATC ACGGCCGAGG CGTGTT CCATGGCCGC TTTTTCATCTTCGGT Dole_1116 1328384 - 1327473 - | GTP-binding protein Era Dole_1117 1328981 - 1328388 - | GTP-binding protein HSR1-related TERM 2122 1328428 - 1328446 + g 90 -11.6 -4.37886 | overlap 1328429 CGGGCAATAGTCTCC AGGGCCGG GTC CCGGCCCA TTTTCTGCAAAGTGG TERM 2123 1328429 - 1328445 + g 87 -15.1 -3.2241 | overlap 1328428 GGGCAATAGTCTCCA GGGCCGG GTC CCGGCCC ATTTTCTGCAAAGTG TERM 2124 1328481 - 1328468 - G 77 -2.4 -5.12707 | GCAAAGTGGAAAAAA GGAT CATCTC ATCC GCGCCAATGCCCACG TERM 2125 1328510 - 1328533 + g 86 -12.4 -3.95535 | gap 1, overlap 1328519 CGGCCCGGGCAATTT CGTGCCGCCGG CGG TCGGCGGC-CG TCTTTTTAAACTTGT TERM 2126 1328519 - 1328535 + g 83 -7.9 -4.6902 | overlap 1328510 CAATTTCGTGCCGCC GGCGGTC GGC GGCCGTC TTTTTAAACTTGTCC Dole_1118 1329892 - 1329017 - | ATP phosphoribosyltransferase TERM 2127 1329602 - 1329620 + g 72 -9.5 -3.64703 | opp_overlap 1329595 GGCAATGACCCACCG GGCCGGC CGGGC GCTGGCC TTTGAATAGACCAGG TERM 2128 1329718 - 1329770 + g 82 -13.4 -3.25823 | gap 1, overlap 1329723 GGGTGCCGTGCTCCA CGTTGCGCGCCATCTCCTGGGCCCT CAGC AGGGCGCAGGAGATGTC-CGGGTCG TTGATGTCCGGAAAA TERM 2129 1329723 - 1329767 + g 76 -13.6 -2.81547 | gap 1, overlap 1329718 CCGTGCTCCACGTTG CGCG-CCATCTCCTGGGCCCT CAGC AGGGCGCAGGAGATGTCCGGG TCGTTGATGTCCGGA Dole_1119 1330269 - 1329889 - | phosphoribosyl-AMP cyclohydrolase TERM 2130 1330489 - 1330468 - g 100 -11.5 -6.09196 | overlap 1330448 TTCAAAAGAAAAAAA CAGGCCGGC CCGG ACCGGCCCG TCGAAAAAGCCGAAG Dole_1120 1330447 - 1331025 + | hypothetical protein TERM 2131 1331158 - 1331176 + G 86 -16 -2.72344 | TGGTACGGCCGTGGC GCGGACCG GTG CGGTCCGC TGCTTGCCCATCGAA Dole_1121 1331047 - 1331322 + | hypothetical protein TERM 2132 1331642 - 1331663 + G 72 -5.8 -4.4891 | overlap 1331640 CCAACCGGTATCTGC TGGCCGGC ACTCTG GTCGGCTA TTTTCTGGTACTGGC Dole_1122 1331452 - 1332750 + | methyl-accepting chemotaxis sensory transducer Dole_1123 1332788 - 1333861 + | diguanylate cyclase TERM 2133 1334384 - 1334397 + G 75 -9.5 -3.86015 | opp_overlap 1334382, overlap 1334393 1334396 AGCTGTGCGAACAGG CGGGC ATCG GCCCG TTTCTGCACAACGTG TERM 2134 1334980 - 1334996 + G 80 -5.1 -5.00884 | overlap 1334973 1334970 1334982 GCGGATAACCGGTCA TCGGTGA TTT TCACCCA TTTTTTAAAAGACAT TERM 2135 1335014 - 1335059 + G 75 -9.5 -3.83205 | opp_overlap 1335012, overlap 1335015 TTTTAAAAGACATGT CCCCGGACTACCTGGAGCGGC ACAC GCCGCCGGAGGTTGTTCGGGA TTTCATATCCGGCAT TERM 2136 1335015 - 1335058 + G 74 -13 -2.89602 | opp_overlap 1335012, overlap 1335014 TTTAAAAGACATGTC CCCGGACTACCTGGAGCGGC ACAC GCCGCCGGAGGTTGTTCGGG ATTTCATATCCGGCA Dole_1124 1333981 - 1335144 + | metal-dependent phosphohydrolase TERM 2137 1335612 - 1335591 - g 78 -2.9 -5.03314 | overlap 1335611 GCCAGGCGGAAAAAA GCGTTCTTC AAAA GGAGAAAGC CGTGGCGGCCGCTGC TERM 2138 1335621 - 1335611 - g 74 -8.2 -4.208 | overlap 1335591 1335612 CTTCAAAAGGAGAAA GCCG TGG CGGC CGCTGCGCCCCCGGC Dole_1125 1335323 - 1335685 + | hypothetical protein TERM 2139 1336285 - 1336302 + G 72 -9.8 -3.671 | overlap 1336296 1336297 1336298 TAATACCGGAATCCG GCGCCG ATGACG CGGCGC TTTCGCCCTTTGTTT TERM 2140 1336297 - 1336310 + G 70 -3.7 -4.57205 | overlap 1336285 1336296 1336298 CCGGCGCCGATGACG CGGCG CTTT CGCCC TTTGTTTCCCTTTTT TERM 2141 1336893 - 1336927 + G 85 -2.8 -5.42265 | opp_overlap 1336872 CTTTTCGCCCTGCCG GGTCTGGCAACAGA ACTGAAG TCTTTTGACAGCCC TTTTTTCTCCTTTGC TERM 2142 1337323 - 1337313 - g 70 -2.4 -4.72272 | GTGTTTGAGGAAAAA GCCC TGG GCGC CGAAGAACAGCGCGT TERM 2143 1338014 - 1337999 - g 82 -10.4 -4.19953 | opp_overlap 1338013 GACCGAACTGGAAAA CACCCG GCCC CGGGTG AAGAACTTTCATATT Dole_1126 1335747 - 1338392 + | DNA mismatch repair protein MutS TERM 2144 1338991 - 1339004 + G 72 -9.5 -3.64703 | CCCCACCGGTCCCTG GGCCG CGGC CGGCC TTTACATGGCCGGAA TERM 2145 1340106 - 1340121 + G 72 -6 -4.3739 | opp_overlap 1340105 1340101 1340106 CCAAGATCAACGAAT CCAGCC GCCT GGCCGG TTTTGTGCAGGGCTC Dole_1127 1338389 - 1340392 + | N-acetylmuramoyl-L-alanine amidase TERM 2146 1340824 - 1340841 + T 76 -7.1 -4.4261 | CTACAGAACCCCTGA TCTTTAC AAAG GTAAAGA TTTTCGTATTGAAGG Dole_1128 1341356 - 1340919 - | hypothetical protein TERM 2147 1340956 - 1340969 + g 85 -3.1 -5.33985 | gap 1, overlap 1340955 1340957 GCGATGTCCTGGGGT CT-GCC GGA GGCGAG TTTGTTTTTTTTCAG TERM 2148 1341676 - 1341629 - R 95 -15.1 -2.83345 | gap 3, opp_overlap 1341636, overlap 1341626 GGCAGAGATGAATCA TG-CGGAAGCACCGGGAGCCGCAC ACC GT-CGAC-CCCGATGCTTCCGTCA ACACAAACCCTATGT Dole_1129 1342459 - 1341686 - | hypothetical protein TERM 2149 1342052 - 1342040 - G 74 -7.7 -4.21194 | opp_overlap 1342034 GGTGATCATGTAAAA GGTCA TCT TGACC TTCAGCCGTTTTTTG TERM 2150 1342439 - 1342424 - G 70 -4 -4.57073 | gap 1 CACGGCCCTTAAAAA GAT-GCG TGA CGCCATC AACTCTCGTTCGGTT Dole_1130 1343473 - 1342463 - | transketolase central region TERM 2151 1343518 - 1343528 + r 71 -8.2 -3.62522 | TTCACTGTTACACGC GGCC ATA GGCC TTGTTCAGGGAGTTC Dole_1131 1344352 - 1343510 - | transketolase domain-containing protein TERM 2152 1344159 - 1344179 + g 75 -5.4 -4.62069 | gap 1, overlap 1344160 CTCAGGATCAGCCGG TCCCGGTCT TCCC AG-CCGGGG TTTTTCGGGTCCACC Dole_1132 1345615 - 1344365 - | aminotransferase class-III TERM 2153 1344498 - 1344488 - G 87 -8.2 -4.78149 | overlap 1344489 GTGAGAAGTGAAAAA GGCG CCC CGCC GGGTACATTCGCCGC TERM 2154 1344933 - 1344951 + g 77 -2.3 -5.03314 | opp_overlap 1344919, overlap 1344935 AGCACCACGCCGTGT TTGCGGC ACAGG GCCTCGA TTTTTTGCCAGTAGC TERM 2155 1345283 - 1345265 - G 83 -5.9 -5.00616 | GTTTTTGGCAAAAAA GGCCCAG TCCAT CTGCGCC ACGGTGTTTACCAGC TERM 2156 1345544 - 1345567 + g 70 -3.6 -4.56597 | opp_overlap 1345544, overlap 1345558 GAAGTGACCGTAAAT GCCGCAGGGG ATGA CGCCGGCCGC TTTTTCAAAAAGGCG TERM 2157 1345558 - 1345589 + g 74 -7.2 -4.29738 | opp_overlap 1345544, overlap 1345544 TGCCGCAGGGGATGA CGCCGGCCGCTTTT TCAA AAAGGCGTCTGGAG TTTTCATAGGTATAG Dole_1133 1346394 - 1345630 - | hypothetical protein TERM 2158 1345814 - 1345832 + g 73 -3.1 -4.81249 | GCCGGCCTGTCGTGT TCACCTT TTTCC ATGGTGA TTTTTCCCTTTGCCA TERM 2159 1346187 - 1346213 + g 83 -13.7 -3.55563 | gap 1, opp_overlap 1346178 1346176 1346173, overlap 1346186 1346205 ACATCAGCCGCACAT CCGGCGACGGGT GCTT GCCCG-CGCCGG TTTCACAGGTGCCGT Dole_1134 1347582 - 1346467 - | alanine dehydrogenase TERM 2160 1347200 - 1347214 + g 83 -5.6 -4.89339 | ATGGGGGTGAGCAGG GGAAGG GAG CCGTCC TTTTTCTGAATGGTT Dole_1135 1348256 - 1347636 - | TetR family transcriptional regulator TERM 2161 1347755 - 1347793 + g 85 -2.5 -5.52384 | overlap 1347731 1347755 1347758 CAAACCATTGCAGCT CC-GTGCCTTCGTGCATGG CGA CGAT-CATGGAGGCATAGG TTTTTTTCGTGGCGG TERM 2162 1348139 - 1348113 - G 81 -12.2 -3.63922 | opp_overlap 1348125 1348129, overlap 1348111 ACGGTCGGCAAAATA GTGGTGCAGCAC GCT GGGCTGCACCCC GGCCTCTTTGGCGAC Dole_1136 1349636 - 1348590 - | response regulator receiver modulated metal dependent phosphohydrolase TERM 2163 1349278 - 1349254 - G 74 -6.5 -4.46212 | opp_overlap 1349257 TGCCTGAGCATAAAA TTCTCAAAAGC TTT GATCTTGAGAA GGTTCTGAACCCGGA TERM 2164 1349663 - 1349682 + r 86 -7.9 -4.84527 | opp_overlap 1349666 TGTAACCTTTTTTCA GAACACG CATTGA CGTGTTC TTTTTCATCTGTCCA TERM 2165 1350071 - 1350083 + r 100 -10.5 -4.92783 | opp_overlap 1350068 1350066 1350064 ACCCATAACAGAGGC GGCGG GAT CCGCC TTTTTATCCTCGGTT TERM 2166 1350215 - 1350205 - R 71 -6.8 -4.16016 | overlap 1350206 TTATTCCGTAAGAAA TGGC AAG GCCA AGCCCGGTCCCTTCA TERM 2167 1350992 - 1351018 + r 70 -2.3 -4.86216 | ACGAGTTTTTTGAGG CAAAGGACG TTAAGAGTT CTTCCTTTG TTTGTTCTTTTTTGT TERM 2168 1351846 - 1351867 + r 74 -2.9 -5.0133 | gap 1, opp_overlap 1351830 GTCATAGCCGGATTG GCC-TGGACG ATA TGTCCCTGGC TTTTTTCGAGAAGTA TERM 2169 1352669 - 1352637 - R 100 -11.6 -6.01369 | gap 1, opp_overlap 1352637 GAAACAAGAAAAAAA GGTCATA-TATAACC TTTG GGTTATAATATGACC TTTTTTATATGACTC TERM 2170 1352637 - 1352669 + r 100 -11.6 -5.38047 | gap 1, opp_overlap 1352637 GAAACAAGAAAAAAA GGTCATA-TATAACC TTTG GGTTATAATATGACC TTTTTTATATGACTC TERM 2171 1352722 - 1352738 + r 70 -8 -3.93262 | AACTATCCGGGTTAG CCCTTG TATGC CAAGGG TTTGCTGTATTCAAC Dole_1138 1353755 - 1352718 - | diguanylate cyclase TERM 2172 1353631 - 1353611 - G 100 -7.6 -5.5943 | AAATCATGAAAAAAA TGCCGGTA TAGAT TACCAGCA GGGACAGAAACAGCA TERM 2173 1353937 - 1353957 + H 77 -2.6 -5.252 | gap 1, opp_overlap 1353938, overlap 1353938 CGTTATTTATGATAA G-TGAGTGG CAGG CCATTCATC TTTTTTATAGACATG TERM 2174 1353938 - 1353955 + H 71 -6.3 -4.25873 | opp_overlap 1353938, overlap 1353937 GTTATTTATGATAAG TGAGTGG CAGG CCATTCA TCTTTTTTATAGACA TERM 2175 1354544 - 1354486 - g 95 -18.2 -2.57132 | gap 1, opp_overlap 1354506, overlap 1354485 1354506 CGCCGTGCCCACAAC CGCGGG-GACCGGATCTGAAACCACCA TAGCGG CGGTGGTGTCGGACCCGGCCACCCACG AAAAGTATCCGATTA Dole_1139 1354055 - 1355224 + | iron-containing alcohol dehydrogenase TERM 2176 1355225 - 1355250 + T 77 -10.5 -3.58208 | overlap 1355214 1355222 CAGCTCAAGGCGTAG CCCGGATATTT CATG AAACATCCGGG TTCATTATTGTCCAA Dole_1140 1355954 - 1355430 - | hypothetical protein TERM 2177 1355684 - 1355674 - G 74 -8.2 -4.10007 | opp_overlap 1355683 ACAATTTGCTGAAAA GCGC CCA GCGC CGACTCAGCATCCTT Dole_1141 1356477 - 1358132 + | carboxylesterase type B Dole_1142 1358206 - 1359225 + | hypothetical protein Dole_1143 1359252 - 1360346 + | lipase chaperone Dole_1144 1360361 - 1361440 + | alpha/beta hydrolase fold TERM 2178 1361446 - 1361429 - f 87 -6.9 -5.01732 | AATCGTCTGAAAAAA GCCGGTT ACTA ACCCGGC CAAACAAACCAATAA TERM 2179 1361542 - 1361568 + G 71 -10 -3.60296 | overlap 1361544 1361545 GCAGCCACTGTTCGC CATGGCGCCGGC CCC GCCGCCGCCGTC TTTAAGATCGCAGTA TERM 2180 1361544 - 1361566 + G 79 -12.6 -3.38046 | overlap 1361542 1361545 AGCCACTGTTCGCCA TGGCGCCGGC CCC GCCGCCGCCG TCTTTAAGATCGCAG TERM 2181 1361545 - 1361565 + G 74 -13.9 -2.62613 | overlap 1361544 1361542 GCCACTGTTCGCCAT GGCGCCGGC CCC GCCGCCGCC GTCTTTAAGATCGCA Dole_1145 1361474 - 1363693 + | glycoside hydrolase family protein TERM 2182 1363676 - 1363686 + F 77 -6.8 -4.57073 | overlap 1363681 TGTTTCTTCAGGTGC GGAG AGT CTCC TTTTTAAAGAGGCTG TERM 2183 1364135 - 1364146 + G 70 -3.6 -4.66264 | overlap 1364143 ACGAGACCTTTTACC TGGC GGAA GCCG TTTTTGGCGCTTTTG Dole_1146 1363894 - 1364514 + | adenylate kinase-like kinase Dole_1147 1365627 - 1364536 - | peptidase M48 Ste24p TERM 2184 1365022 - 1365039 + g 80 -4.8 -5.00616 | gap 1, overlap 1365022 CAGGGCCAGAGCGTT GG-GGCC AAGGG GGCCGCC TTTTTTGAACACAAG Dole_1148 1366906 - 1365638 - | hypothetical protein TERM 2185 1365814 - 1365802 - G 83 -4.7 -5.15117 | CAAAAGGGTAAAAAA GCCCC AGG GTGGC AACCGTGGCCAGGGA Dole_1149 1367368 - 1366976 - | response regulator receiver protein Dole_1150 1368470 - 1367376 - | coenzyme F420 hydrogenase/dehydrogenase beta subunit TERM 2186 1368154 - 1368170 + g 83 -5.8 -5.00616 | gap 1, opp_overlap 1368131, overlap 1368138 1368138 1368157 AGCACGGCGGTGACA GCC-CCG CCGT CGGTGGC TTTTTTGCGCACCAC Dole_1151 1369415 - 1368486 - | methylenetetrahydrofolate reductase TERM 2187 1368698 - 1368708 + g 87 -8.2 -4.84274 | CGGGCACATCCATGC CCGG TAC CCGG TTTTTCATGTACTTG Dole_1152 1370080 - 1369412 - | hypothetical protein TERM 2188 1369940 - 1369961 + g 74 -10.9 -3.61715 | gap 1, overlap 1369960 TTTCATGCGCAGCAG GGAGGCCAGA ATC TC-GGCCTCC TTGTTGCCGCCGGTA Dole_1153 1370713 - 1370216 - | hypothetical protein Dole_1154 1372292 - 1370970 - | ankyrin repeat-containing protein Dole_1155 1372933 - 1372445 - | hypothetical protein Dole_1156 1381832 - 1372947 - | YD repeat-containing protein TERM 2189 1373169 - 1373179 + g 72 -5.4 -4.49167 | TTCTGAATGCCCATC TGGT GAA ACCA TTTTAATATTATCTT TERM 2190 1374497 - 1374520 + g 70 -2.4 -4.75219 | overlap 1374480 ATTCCACGTTGAAGT CCTCGTTATA GGTA TATGACAGGG TTTTGTTGATGGTTC TERM 2191 1376418 - 1376404 - G 73 -2.8 -4.82901 | TCTCTTTCAGAAAAA TAAAGG TTG CCTTTT ACATCTACGACAATA TERM 2192 1379863 - 1379851 - G 93 -9.1 -4.82901 | TGGTTGGTATAAAAA CCGTC GGT GACGG TAAAGTCAGCGTAGC TERM 2193 1380366 - 1380353 - G 75 -3.8 -4.86731 | CTGTCTCAAATAAAA CAGC CATATT GCTG GTAACGGCAAAAGAC Dole_1157 1382168 - 1382013 - | methyl-viologen-reducing hydrogenase, delta subunit Dole_1158 1382513 - 1382244 - | methyl-viologen-reducing hydrogenase delta subunit Dole_1159 1385555 - 1382547 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2194 1382831 - 1382853 + g 75 -5.5 -4.57569 | CCGAGGCGGCCAGTG CCTGGCTGA CGGTC TCGTCCAGG TTTTTGGGGGCGTGG TERM 2195 1383219 - 1383236 + g 86 -3.3 -5.5112 | overlap 1383221 CCGGTAGAAAATGGT GACCCCG GCTT TGGGGTA TTTTTTCTTGATGGC TERM 2196 1383656 - 1383676 + g 86 -6.7 -5.02476 | overlap 1383662 GGTAAACGTTTTTGA CCAGCCCGC CCA GGGCGCTGG TTTTTTCAACGATAT TERM 2197 1383819 - 1383849 + g 84 -7.5 -4.72272 | overlap 1383818 1383815 GAACAGTTTGACCTT GGCCACCGTCATT TTGAC GATGTCGATGGCC TTTTTCGTGGCCGGC TERM 2198 1384189 - 1384226 + g 75 -5.3 -4.69664 | opp_overlap 1384175, overlap 1384185 1384193 AGCACGCCGATGCGG GCCTCGGCCCCGGTGGT GTCG GTTTCCGGGGGCAGGGC TTTTTCCGTGATCTC Dole_1160 1386426 - 1385539 - | CoB--CoM heterodisulfide reductase TERM 2199 1385679 - 1385665 - G 79 -5.6 -4.72272 | TTCCGTGATGAAAAA GACCGG CAG CCGTTC GGAAATGTTGTGGGC Dole_1161 1387293 - 1386682 - | heterodisulfide reductase subunit C-like protein TERM 2200 1387374 - 1387361 - H 85 -8.1 -4.79223 | opp_overlap 1387361 GGATATTATGAAAAA CAGGC CTTG GCCTG TGATGTTTTATCCTG TERM 2201 1387627 - 1387641 + H 71 -2.7 -5.00616 | opp_overlap 1387629, overlap 1387629 CATATATAAAGAGCA GACCG ACCGG CGGGC TTTTTTGCAAAGCAC TERM 2202 1387672 - 1387686 + H 71 -7.1 -3.97368 | opp_overlap 1387658 1387653 1387671 1387674 AGCGGGTCGATATAT CAGCC CCGCA GGCTG TTTATGAGTTGAAAG TERM 2203 1388229 - 1388203 - g 70 -2.3 -4.79223 | gap 1 CGAGATCACGAAAAA GGCGT-GTGAAA AATT TTCCACCATGCC GGTGTCGGTGATGAA TERM 2204 1388327 - 1388338 + G 76 -7.2 -4.46854 | CTGCGGCCCAAGGCC GGCG GTAT CGCC TTTGTTCTTGCCTCC Dole_1162 1387709 - 1388611 + | phospholipid/glycerol acyltransferase TERM 2205 1388921 - 1388944 + F 100 -12.4 -5.86061 | GCCCTGACCCTGTTA CGGCCGACTT CCTC ACGTCGGCCG TTTTTTTTGATAACG TERM 2206 1389170 - 1389151 - f 73 -4.8 -4.66163 | overlap 1389153 1389154 ACTCGTACTCAAAAA GAGCCGGC TGAG GCCGGAAC GGTATGGGGATAAAG Dole_1163 1389233 - 1389991 + | stationary-phase survival protein SurE Dole_1164 1390005 - 1390967 + | metal dependent phosphohydrolase Dole_1165 1390967 - 1391611 + | dTMP kinase TERM 2207 1393193 - 1393183 - g 70 -4.6 -4.44797 | GGACGAATATGAAAA GGAG AAC CCCC GGGACTTTACCCTGC TERM 2208 1393397 - 1393425 + G 84 -13 -3.73783 | overlap 1393404 1393422 GAGATTGCCATTGCC CGGGCCGCCACC GGCCG GGAGCCGGCCCG TTATTGGGTTCACTG TERM 2209 1393566 - 1393578 + G 70 -4.1 -4.57569 | overlap 1393549 1393556 TTTCCGGCCATTACC GGAAG GCC CTTTC TTTTTCCGCCGATCG Dole_1166 1391756 - 1394071 + | cysteine synthase TERM 2210 1394686 - 1394708 + G 70 -2.7 -4.82901 | gap 1, overlap 1394681 GGCCATGGTGGCGGC CCGC-GAC ACCCTGCC GTCCGCGG TTTTTATCACAGACA TERM 2211 1394978 - 1394988 + G 85 -2.4 -5.63857 | overlap 1394976 1394977 GTTCTTCCCGATACC GGGC CCC GCGC TTTTTTTGAGTTTTT Dole_1167 1394081 - 1395088 + | hypothetical protein Dole_1168 1395242 - 1395430 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2212 1395462 - 1395497 + F 100 -17.1 -5.63517 | opp_overlap 1395462 TTTTACGGCATGCAA TCCCGGCTTTGAAAC CCCGTT GTTTTAAAGCCGGGA TTTTTTGTTTAAAGG TERM 2213 1395497 - 1395462 - f 91 -14.9 -3.06796 | opp_overlap 1395462 TTTTACGGCATGCAA TCCCGGCTTTGAAAC CCCGTT GTTTTAAAGCCGGGA TTTTTTGTTTAAAGG TERM 2214 1395524 - 1395511 - f 74 -9.5 -3.53224 | GATTTTTTGTTTAAA GGGCC CCTG GGCCC CTTGAACCCTTCAAA TERM 2215 1395727 - 1395752 + G 74 -8.1 -4.11216 | opp_overlap 1395713, overlap 1395728 ACCGGGGGCACGGGT GGCCCTGGCCG TTGG CAGCCGGGGCA TTTTCGGCATCGACA TERM 2216 1395898 - 1395874 - g 82 -6.4 -4.84359 | gap 1, opp_overlap 1395889 CGACGGCCAGAAAAA GGTGCTGGCCG GTTA CGGC-ATCACC GGGGAAGCCATGGGC TERM 2217 1396305 - 1396288 - g 70 -2.7 -4.80455 | overlap 1396290 GATGGAAAGAGAAAA GGTTCTT TTAA AAGAAGC GTACGCCACGATGGC TERM 2218 1396414 - 1396434 + G 89 -3.9 -5.64274 | TAATGTGACGGGCCG TCACCGG GACATCA CCGGCGA TTTTTTTGTCGCTCC Dole_1169 1395578 - 1396852 + | iron-sulfur cluster binding protein TERM 2219 1397228 - 1397218 - g 87 -6.8 -5.01497 | overlap 1397226 ATGACCAGACAAAAA GCAG AAA CTGC CGAAACCGTCACTGT TERM 2220 1397438 - 1397428 - g 70 -2.4 -4.86862 | opp_overlap 1397432 GGCAAAAAAGTAAAA CTCC CCT GGCG CTGGTTTGACATGAG Dole_1170 1397203 - 1397757 + | methylated-DNA--protein-cysteine methyltransferase TERM 2221 1398608 - 1398597 - g 74 -7.2 -4.27617 | opp_overlap 1398597, overlap 1398598 TAGATGCCATGAAAA CCGG CGAC CCGG ACCGGTTCCTGGGCA TERM 2222 1399644 - 1399601 - g 71 -10.1 -3.55203 | gap 1 AAAACGGTGCTCAAA CGGGCCGCGGCCGGCAAGGC GGATG GCCTGCCCGGTC-CGGACCG GCTGCTGGACATGAT TERM 2223 1399850 - 1399871 + G 74 -8 -4.22927 | opp_overlap 1399843 1399840, overlap 1399854 CATAAGGATGTGCGG CAGACCGC GCAGCA GCGGTTTG TTTATATATTCGTGG TERM 2224 1399854 - 1399867 + G 75 -5.2 -4.68132 | opp_overlap 1399843 1399840, overlap 1399850 AGGATGTGCGGCAGA CCGC GCAGCA GCGG TTTGTTTATATATTC TERM 2225 1400043 - 1400056 + G 84 -3.7 -5.24129 | opp_overlap 1400034, overlap 1400044 TTGAAACCGACTACC CCGGG GCCG CCCGC TTTTTTCTGGAAAAA TERM 2226 1400199 - 1400222 + G 71 -8.1 -4.07568 | overlap 1400200 TCACCGTGGCAAGGC TTGCCTCGG AGCGGG CCGAGGCGG TTTTCGCGGGCCGGA TERM 2227 1400588 - 1400548 - g 78 -4 -5.0133 | gap 1 CACCGCGGCAAAAAA GCAGGCTGTGAT-TTCCGC GTGG GCAAAAGAGCGCAACCTGC CGGCGGCCGAGGTCC TERM 2228 1400810 - 1400850 + G 89 -3.9 -5.52986 | gap 2 GAAGCTTTTGACGCG GCGGTTG-AAGCG-GCCCG GCCCG CGGGCACGGACGCAACCGC TTTTTTTGATACCGT TERM 2229 1401040 - 1401080 + G 84 -2.5 -5.44119 | TATTGACGAGGAGCG GCGGCTTTTTTACGTGG CCATGAC CCGGGCAAAAGAGCGGC TTTTTTTGACCTGGG Dole_1171 1397843 - 1401241 + | UvrD/REP helicase Dole_1172 1401506 - 1401877 + | hypothetical protein Dole_1173 1401956 - 1402543 + | lytic transglycosylase catalytic TERM 2230 1402803 - 1402819 + G 73 -12.3 -3.04144 | overlap 1402815 CAGCTCCGGTCATCT GGTGCTG GTC CAGCACC TGTTCGGCATCACCG TERM 2231 1403062 - 1403076 + G 83 -5.7 -4.87665 | opp_overlap 1403062 GGGCTCGGGCTCAAA CAGGT AGACC ACCTG TTTTTCTCCCTGCCC TERM 2232 1403294 - 1403304 + G 86 -4.6 -5.20781 | overlap 1403287 GGCTGGATCGGGCCA CTGC GGC GCGG TTTTCTTTTCTGCTC Dole_1174 1402723 - 1403544 + | bacitracin resistance protein BacA TERM 2233 1404165 - 1404200 + G 71 -11 -3.29144 | AGGTGGGGGTGGACG CCGGCAACGGCACGGC CGGC GTGGTGGCGGTGCCGG TTCTCAAGGCCCTGG TERM 2234 1404600 - 1404587 - g 84 -3.7 -5.20534 | opp_overlap 1404594, overlap 1404588 ATGAAGGAAGAAAAA GCGGC CCTG GCCGG GGAGATGAGCGGCCA Dole_1175 1403654 - 1404997 + | phosphomannomutase TERM 2235 1405155 - 1405166 + G 70 -3.6 -4.6821 | opp_overlap 1405155, overlap 1405150 CGCAGGCGGTCAAAA GCGG AAAC CTGC TTTTCTGTTCCGGTT Dole_1176 1405076 - 1405468 + | putative endoribonuclease L-PSP TERM 2236 1405788 - 1405763 - g 71 -10.3 -3.53444 | opp_overlap 1405776 1405783 1405784 CGACCTTCTGGGAAA GCCGGACTCCG TGGC CGATGCCCGGC GCATGCTGGGCCGGC Dole_1177 1405500 - 1406123 + | maf protein TERM 2237 1406678 - 1406690 + G 72 -4.7 -4.56597 | overlap 1406679 CAACTGTGAGTACTG CGCGG TCT CCGCC TTTTTCGGGCGGACC Dole_1178 1406139 - 1407458 + | radical SAM domain-containing protein TERM 2238 1407574 - 1407536 - g 75 -9.4 -3.83668 | overlap 1407556 GAACAGATAAGAGAA CGGATTCAAGCCGCAACC GAG GCGTGCGGCCGGGATCCG GCAACCGTCCGGCTG TERM 2239 1407915 - 1407899 - g 88 -13.7 -3.64682 | CAGGAAAGGTCCAAA TCGGGGG TGG CCCCCGA AGACATGGCCGGCCT TERM 2240 1408046 - 1408033 - g 70 -3.7 -4.62069 | GCCCCATTTTAAAAA GCTGC GCAT GCTGC GGGACGCGATTGAAA Dole_1179 1407506 - 1408189 + | alanine racemase domain-containing protein Dole_1180 1408186 - 1408719 + | hypothetical protein Dole_1181 1409216 - 1408731 - | hypothetical protein TERM 2241 1408771 - 1408760 - G 95 -2.2 -5.80248 | TAAGATAGAAAAAAA GCAC CGTG ATGC AGTAGGCCAGCTTGA Dole_1182 1410194 - 1409226 - | 2-nitropropane dioxygenase NPD TERM 2242 1409529 - 1409544 + g 93 -9 -4.7416 | GGTCTCCAGCTCGGT GGCGTT CATT AACGCC TTTTTCAGGTTTTCG TERM 2243 1410151 - 1410169 + g 76 -4.4 -4.82901 | overlap 1410152 GTGCCCCCGAGAATC GGGTGGGC AAT GCCCAGCA TTTTTGTAACAGCGG Dole_1183 1410724 - 1410191 - | hypothetical protein TERM 2244 1410329 - 1410317 - G 78 -9.1 -4.1585 | GCACAACTGTGAAAA GGTGG CGC CCACC ACGTCGGTGGGGTCG Dole_1184 1411008 - 1411478 + | hypothetical protein Dole_1185 1412105 - 1413013 + | hypothetical protein TERM 2245 1413575 - 1413553 - g 84 -2.7 -5.47159 | gap 2, overlap 1413554 CTCGAAGATAAAAAA CGCCCG--TGG AAT CCAGGCAGGCG AACCGAGTTGCTGGA Dole_1186 1413010 - 1416603 + | TPR repeat-containing protein TERM 2246 1416856 - 1416870 + T 73 -5.6 -4.56597 | opp_overlap 1416850 CTTTAATGACGCACG GTGGGG CGC TCCCGC TTTTTGCCACGGCCG Dole_1187 1417406 - 1416951 - | hypothetical protein Dole_1188 1418910 - 1417465 - | DNA polymerase III delta TERM 2247 1418342 - 1418353 + g 71 -7.2 -4.18018 | ACCAGATGGTTGTTC GGGG CAAA CCCC TTTTCAATGGCAGCC TERM 2248 1418479 - 1418494 + g 84 -7.5 -4.84761 | overlap 1418485 GGTGTCGTCATCCAG GGCCC GGGCCA GGGCC TTTTTGTCCAGGTCT TERM 2249 1418577 - 1418603 + g 78 -4.2 -5.00884 | CCACGGCCTTGGTCT TCCGGTCGGCGG CCA CGGCTTCCCGGA TTTTTTCCACCAGGT Dole_1189 1419686 - 1418910 - | prolipoprotein diacylglyceryl transferase TERM 2250 1419304 - 1419288 - G 75 -5.7 -4.57569 | overlap 1419289 GCACCCGGCGAAAAA GCAGCCG ATG CGGCCGA TGGCATGGCCCAGGG Dole_1190 1420173 - 1419691 - | lipoprotein signal peptidase Dole_1191 1422989 - 1420200 - | isoleucyl-tRNA synthetase TERM 2251 1420338 - 1420369 + g 72 -8.6 -3.79251 | gap 1, overlap 1420325 1420324 1420338 CACCCGCACGCCCTT G-GGCGCCGGGCTTT CCG ACGGGCCGGCGCCGC TTTCCTCATCCACTA TERM 2252 1421754 - 1421768 + g 78 -4.2 -5.00616 | opp_overlap 1421742 CCATTGGGGCGTGGC CCGG AAGATCA CCGG TTTTTTGCACCGCCA TERM 2253 1422600 - 1422626 + g 70 -3.7 -4.56597 | gap 1, overlap 1422601 1422602 AATGGAGATAAACTT TTGGGCATACTG CCGG CAG-ATGCCCCG TTTTTCCAGCAGGGA TERM 2254 1423090 - 1423078 - R 85 -4.7 -5.37593 | TTGTAAAGGAAAAAA CCCGG CAG CCGCG TGAAAAACAGGGGTT TERM 2255 1423109 - 1423124 + r 80 -4.6 -5.03715 | opp_overlap 1423100 1423098 1423109 1423111 AAAACAGGGGTTAAA CACCGG GGGG CCGCTG TTTTTTCAGAATGAT Dole_1192 1423844 - 1423104 - | methyltransferase GidB Dole_1193 1425717 - 1423846 - | acetyl-CoA hydrolase/transferase TERM 2256 1424063 - 1424079 + g 75 -3.6 -4.72986 | opp_overlap 1424063, overlap 1424065 TCCCGCACCACGAAG GCCACC TCGGC GGTGTC TTTTTCGTCGGACTG TERM 2257 1424570 - 1424546 - G 70 -2.7 -4.77165 | opp_overlap 1424560, overlap 1424555 TCCGTGACAACAAAA TGGATATCACC GCG GGTGGTGGCCA CGCCCGCGCCTTCGC TERM 2258 1424915 - 1424927 + g 90 -4.8 -5.47399 | GAGGCCACGGCCCGG CCCT TGAGC AGGG TTTTTTTCCGGTTGG TERM 2259 1426089 - 1426110 + G 100 -8.7 -5.67063 | opp_overlap 1426086 GTTTTGACGACAGGC GCAGGGC GCTGGATG GCCCTGC TTTTTTTATGGTGCG TERM 2260 1426957 - 1426942 - g 71 -7.5 -4.11216 | TTTCCAGGTGGAAAA GCCCC CACAAC GGGGC CGTCTATCCGTCGGC TERM 2261 1427144 - 1427185 + G 79 -5.8 -4.86731 | gap 1, overlap 1427151 1427166 CTACTGCCCCTGGAA GGCCATG-GCCGACCTGCT GGAGG AGTAGGACGGCTTGTGTCC TTTTCTTTGGCGCAA Dole_1194 1426056 - 1427171 + | hypothetical protein TERM 2262 1427151 - 1427177 + T 79 -10.1 -3.71267 | overlap 1427144 1427166 CCCTGGAAGGCCATG GCCGACCTGCT GGAGG AGTAGGACGGC TTGTGTCCTTTTCTT TERM 2263 1427235 - 1427220 - T 73 -4.6 -4.74518 | AAGGACCAAAAGAAA CATGCC CCGC GGCTTG GCCACACCACAGGTG TERM 2264 1427236 - 1427254 + T 91 -14.6 -3.05384 | ATGCCCCGCGGCTTG GCCACACC ACA GGTGTGGC TTCCCTCGCGCGAAG TERM 2265 1427476 - 1427508 + T 72 -10.6 -3.04799 | gap 1, opp_overlap 1427458, overlap 1427500 CCGGTCTTTGACGGG TGCCACGGCCGAAGC GTCA GCTT-GCCCGTGGCG TATTCCCGGGTTGTC TERM 2266 1427552 - 1427589 + T 100 -15.7 -3.04591 | opp_overlap 1427552 1427558, overlap 1427558 GATATTTCCTGTAAA CAGAAACGCACCGGC CGTGAAAA GCCGGTGCGTTTGTG CTTTGTGCCTTTTTA TERM 2267 1427589 - 1427552 - T 100 -16.4 -3.54129 | opp_overlap 1427552 1427558, overlap 1427558 GATATTTCCTGTAAA CAGAAACGCACCGGCC GTGAAA AGCCGGTGCGTTTGTG CTTTGTGCCTTTTTA TERM 2268 1427558 - 1427583 + T 100 -13.3 -4.17701 | opp_overlap 1427552 1427558, overlap 1427552 TCCTGTAAACAGAAA CGCACCGGC CGTGAAAA GCCGGTGCG TTTGTGCTTTGTGCC TERM 2269 1427583 - 1427558 - T 100 -14 -4.32857 | opp_overlap 1427558 1427552, overlap 1427552 TCCTGTAAACAGAAA CGCACCGGCC GTGAAA AGCCGGTGCG TTTGTGCTTTGTGCC TERM 2270 1427693 - 1427670 - T 76 -11 -3.09635 | ATTGCGAGGAGCGAA TGCGACGAAG CAAT CTTCGTCGCC AATGGAAACTATTTC Dole_1195 1428649 - 1427702 - | hypothetical protein Dole_1196 1430047 - 1428698 - | hypothetical protein TERM 2271 1429048 - 1429061 + g 77 -2.3 -5.0916 | TTTTGTCCGGGTAGA GGGCA TAAG TGGCC TTTTTGTCTTCCCGG TERM 2272 1429853 - 1429879 + g 78 -6.4 -4.56775 | opp_overlap 1429867, overlap 1429854 CGGCATGACGGCGTA GTGGCGGGAGGC AAT GGCTGCCGCCAG TTTTTCACGGACCAT Dole_1197 1431289 - 1430078 - | hypothetical protein Dole_1198 1432663 - 1431743 - | radical SAM domain-containing protein TERM 2273 1431920 - 1431934 + g 87 -9.2 -4.57341 | opp_overlap 1431920, overlap 1431926 1431927 CCCGCTGTCCACAAA GGCCCG GTC CGGGTC TTTTTCCCGGAAATT TERM 2274 1431937 - 1431947 + g 70 -4 -4.62069 | overlap 1431927 1431926 CCCGGTCCGGGTCTT TTTC CCG GAAA TTTTTCAGGTCCCCC TERM 2275 1432477 - 1432449 - G 70 -4.6 -4.52857 | gap 2, opp_overlap 1432449 1432450 1432471, overlap 1432451 AGGGTTGAGAGAAAA TCC--CGGTGAACC GTG GGTTCTCCGCCGGA CAGGCACACTTCCTG Dole_1199 1433609 - 1432689 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Dole_1200 1435016 - 1433670 - | hypothetical protein TERM 2276 1434220 - 1434194 - G 73 -12.3 -3.05384 | opp_overlap 1434190 1434187 GGCCCGGGCATTGAA GCGCCATGTAG CCGAT CTCCATGGCGC TGTACATGTCCTTGA TERM 2277 1435082 - 1435132 + H 71 -4.5 -4.49337 | gap 1, opp_overlap 1435110 1435111, overlap 1435070 1435085 ATCTCTGCGTCAAAC CGCGGGCTTCCTTGTGCGGCGTAC AACA GTACGCCTC-CGCGTCAGCCCTTG TTTTCCTTGATCTTG TERM 2278 1435085 - 1435129 + H 76 -7 -4.34008 | gap 1, opp_overlap 1435110 1435111, overlap 1435070 1435082 TCTGCGTCAAACCGC GGGCTTCCTTGTGCGGCGTAC AACA GTACGCCTC-CGCGTCAGCCC TTGTTTTCCTTGATC TERM 2279 1435185 - 1435214 + H 72 -10.2 -3.06261 | gap 1, opp_overlap 1435177 1435182 TTGGAAACACCACGT GGTGT-CATCCAT GATAA ATGGATGGACACC TGTTAAGACTTCGAA TERM 2280 1435614 - 1435643 + G 87 -4.3 -5.48054 | overlap 1435615 AGAAAAAAATCCCCC TGCCGTCCA TTTTTACTTTTT TGGACGGCG TTTTTTCATTTTCCT TERM 2281 1435718 - 1435692 - g 78 -2.8 -5.13473 | overlap 1435693 1435694 AGGAGATGCAAAAAA TCGCGGCCACCA CCG TGGCTGACGCCA TGAGCACGGACCCGG Dole_1201 1435427 - 1435885 + | CBS domain-containing protein Dole_1202 1435898 - 1436413 + | Lipocalin family protein Dole_1203 1436479 - 1437006 + | putative regulator TERM 2282 1437041 - 1437066 + F 88 -13.3 -3.21416 | gap 1, overlap 1437034 1437042 1437044 GATTGCCGCGTCGCT TCCGCCGTTGCC TGG GGCA-CGGCGGG TTGCTCCTCGCAATG TERM 2283 1437042 - 1437065 + F 89 -14.6 -2.52635 | gap 1, overlap 1437034 1437041 1437044 ATTGCCGCGTCGCTT CCGCCGTTGCC TGG GGCA-CGGCGG GTTGCTCCTCGCAAT TERM 2284 1437044 - 1437083 + F 70 -2 -5.00616 | overlap 1437034 1437042 1437041 1437067 TGCCGCGTCGCTTCC GCCGTTGCCTGGGGCA CGGCGGGT TGCTCCTCGCAATGAC TTTTTTACCCGGCCG TERM 2285 1437846 - 1437800 - g 70 -12 -2.82015 | opp_overlap 1437832 1437833 CCTATATTCAGTACA CCGGCGGCACCACCGGCCTGCC CAA GGGGGCCCAGTTGAGCCACCGG AACGTGGTGGCCGAC TERM 2286 1437890 - 1437927 + G 79 -6.9 -4.70659 | gap 1, opp_overlap 1437897 1437898, overlap 1437889 AGCACTGGCTTCACT GGGAAA-AGGGCCGGGGC CTG GCCCTGTCCGGCTTTCCC TTTTTCCATATCGCC TERM 2287 1437913 - 1437897 - g 80 -9.3 -4.11216 | opp_overlap 1437889 1437890, overlap 1437898 GCTTCACTGGGAAAA GGGCCGG GGC CTGGCCC TGTCCGGCTTTCCCT TERM 2288 1438056 - 1438042 - g 87 -4.2 -5.48163 | overlap 1438044 AAAGAAATCAAAAAA TACCGT CCC ACGGTC CTGGTCAACGTGCCC TERM 2289 1438054 - 1438044 - g 74 -6.8 -4.33053 | overlap 1438042 AGAAATCAAAAAATA CCGT CCC ACGG TCCTGGTCAACGTGC Dole_1204 1437148 - 1438854 + | AMP-dependent synthetase and ligase Dole_1205 1438851 - 1439339 + | hypothetical protein TERM 2290 1439404 - 1439379 - f 75 -10.5 -3.28924 | CATGTTTTCTGATAA CCCGGATATTT CATG AAATGTCCGGG CGAATCGAAAGGCTG Dole_1206 1439396 - 1439884 + | hypothetical protein TERM 2291 1439895 - 1439920 + T 91 -14.9 -3.06796 | CTTGACTTGCCCCAA CCCGGATATTT CATG AAATATCCGGG TTCAGTGGCGTCCAA TERM 2292 1440010 - 1440000 - T 73 -3.2 -4.9138 | overlap 1440007 ATTACGGAAATAAAA CTGA AAA CCAG GCTGCCTCTGGAGAA TERM 2293 1440208 - 1440190 - T 100 -16 -3.05384 | GTTTGCGCGAGGGAA GCCACGCC TGT GGCGTGGC GAGCCAGAGGCCAAG TERM 2294 1440227 - 1440243 + T 95 -12.3 -4.29049 | overlap 1440224 CCAGAGGCCAAGCTG TCACGCC TGC GGCGTGA TTCTTTTGGTACTTA Dole_1207 1441115 - 1440429 - | hypothetical protein TERM 2295 1440812 - 1440828 + g 71 -7.9 -4.08216 | GTCCGTTGCCCGCCA CTCCGGC CGC GCCGAAG TTTTCCAGAAGATCA Dole_1208 1442386 - 1441112 - | homoserine dehydrogenase TERM 2296 1442492 - 1442525 + r 78 -5.9 -4.73108 | gap 1, overlap 1442494 GTCTTTCTCTGGCGG GTGCCACGGGCCAACC GAA GGTTG-CCCGTGCCTG TTTTGCTTTTCTGAA TERM 2297 1442494 - 1442523 + r 100 -12.9 -3.96876 | gap 1, overlap 1442492 CTTTCTCTGGCGGGT GCCACGGGCCAACC GAA GGTTG-CCCGTGCC TGTTTTGCTTTTCTG Dole_1209 1443125 - 1442541 - | hypothetical protein TERM 2298 1442986 - 1442970 - G 90 -6.5 -5.27923 | overlap 1442972 GAAGGTGACAAAAAA TCCGGGC AGC ACCCAGA ACGCCTGCCCGAACA TERM 2299 1443210 - 1443254 + r 75 -3.6 -5.10461 | gap 1, overlap 1443213 CTACATAAGTCATTG CGAGCGCAGCGAAGCAATC TTGAACTT GATTGTGTCATTGCGC-CG TTTTTATTCCCTGCA Dole_1210 1443831 - 1443373 - | hypothetical protein Dole_1211 1444597 - 1443911 - | hypothetical protein Dole_1212 1445441 - 1444605 - | integrase catalytic region TERM 2300 1445286 - 1445309 + g 74 -2.4 -5.0133 | gap 1, opp_overlap 1445279 GGCATTAAGCTCCAT CGCTATCCGTG GAG CGCC-ATAGCG TTTTTTAAAGCCGTA TERM 2301 1445427 - 1445407 - G 74 -2.4 -4.87665 | TCCCAGGTATAAAAA CCGGATCG GGAGA CGTTCAGG AGCCGGCACATCATT Dole_1213 1445737 - 1445486 - | transposase and inactivated derivative TERM 2302 1445870 - 1445925 + r 76 -9.9 -3.62597 | gap 3, opp_overlap 1445878 CCGGCACCCAACGTT CCACATCA-C-CGG-CTGGCAATGGAGC ACA GCAAAATTGCCAGTCCGAGTTGATGTGG TTGTTAGAAGCTGCC Dole_1214 1446409 - 1445945 - | hypothetical protein Dole_1215 1450146 - 1446868 - | acriflavin resistance protein TERM 2303 1447330 - 1447306 - G 75 -9.2 -3.87815 | GGTCAGCCCCAGAAA GGCGCCGCCC AGGGA GAGCAGCACC GAGGTCATGATAATA TERM 2304 1447999 - 1448028 + g 72 -8.5 -3.83844 | gap 1 GGATATTTCAATGTT GATCGGCGCCC-CC GTG GGCGGGCCCTGGTC TTCTTCCTTGATGGA TERM 2305 1449327 - 1449344 + g 87 -12.7 -3.84514 | overlap 1449332 CCGCAGTGTGACCGT CCAGCCG GGAC CGGCTGG TTTCGTCCTTGAAAT Dole_1216 1451282 - 1450143 - | RND family efflux transporter MFP subunit TERM 2306 1450650 - 1450682 + g 73 -11.9 -3.10597 | opp_overlap 1450647, overlap 1450667 GATCTGCAGAATTTC GGCCACTTCCTGGCC GGG GGCCAGCACCTGGCC CTTTTCAATAAACAC TERM 2307 1450667 - 1450683 + g 95 -13.7 -4.18018 | overlap 1450650 CCACTTCCTGGCCGG GGGCCAG CAC CTGGCCC TTTTCAATAAACACC TERM 2308 1450964 - 1450974 + g 90 -4.6 -5.40072 | overlap 1450962 1450960 TTTTCACCACGGCCC CGTC ACG GGCG TTTTTTTCAAGCACC Dole_1217 1452595 - 1451279 - | outer membrane efflux protein TERM 2309 1451765 - 1451778 + g 81 -3.7 -5.07107 | TTCCAGCGACACCGT GGGCC AGTA GGCGC TTTTTTCCAGCTTTA TERM 2310 1452716 - 1452699 - R 71 -2.7 -4.85782 | opp_overlap 1452699, overlap 1452667 GTGCCCAAAAAGAAA GAGAATA GCTT TTTTCTC TGTTCCTCTGTGTCT Dole_1218 1453371 - 1452751 - | TetR family transcriptional regulator TERM 2311 1453121 - 1453137 + g 70 -3.6 -4.56597 | overlap 1453104 1453117 GTCAGCCGAAGGGCC GCGGTT TTGCC GGCCGC TTTTTCCAGGGCCGC Dole_1219 1453646 - 1454998 + | transposase IS4 family protein Dole_1220 1455641 - 1456213 + | hypothetical protein TERM 2312 1456549 - 1456570 + T 100 -10.9 -5.74122 | gap 1, opp_overlap 1456549 GGTGGGCAAAAAAAA GGAGGGC-CT GTA AGAGCCCTCC TTTTTTTATATGGTA TERM 2313 1456570 - 1456549 - T 100 -10.9 -5.75342 | gap 1, opp_overlap 1456549 GGTGGGCAAAAAAAA GGAGGGC-CT GTA AGAGCCCTCC TTTTTTTATATGGTA Dole_1221 1458936 - 1456597 - | FG-GAP repeat-containing protein TERM 2314 1458172 - 1458187 + g 71 -6.8 -4.12188 | overlap 1458173 GTTGAACGACGGGGC TGTGGG CGTG CCCACG TTTTCAAAGTAGTGA TERM 2315 1458846 - 1458857 + g 84 -7.2 -4.82901 | opp_overlap 1458833 1458831, overlap 1458833 1458833 GACCGGCCACGGATG CCGC GGCA GCGG TTTTTGTCAGGGAGA Dole_1222 1460509 - 1459211 - | hypothetical protein TERM 2316 1459950 - 1459969 + g 73 -3.4 -4.79223 | opp_overlap 1459937 AGCACCCGTTTGCCC GGTGTCGC CTCT GCAGCGCC TTTTTCCTGCTGTAC TERM 2317 1460366 - 1460386 + g 78 -6.1 -4.66163 | overlap 1460349 1460370 GCCCTTGAGCAGGGC GATCTTGCC TCG GGCAATGTC TTTTTCCATGCCGGT TERM 2318 1460616 - 1460592 - R 70 -10 -3.15579 | overlap 1460595 GCAAGTCTCGAGGAA TGAGGCGTAC TGCGT GTACGCCGCA GTGACGAGGGACGCA TERM 2319 1460613 - 1460595 - R 71 -10.3 -2.78018 | overlap 1460592 AGTCTCGAGGAATGA GGCGTAC TGCGT GTACGCC GCAGTGACGAGGGAC Dole_1223 1461742 - 1460666 - | radical SAM domain-containing protein TERM 2320 1461685 - 1461700 + g 80 -10.4 -3.96327 | TTTCCCAGGCTACCA GGCGCA GTTG TGCGCC TTTGTCCTGGCCGGT Dole_1224 1462756 - 1461785 - | delta-aminolevulinic acid dehydratase TERM 2321 1462481 - 1462501 + g 76 -3.2 -5.00616 | overlap 1462482 1462483 ACCGTCCTTTGCGTA GGCCCC GGTGCCCAG GGGGTC TTTTTTGCCGGGCAC Dole_1225 1463953 - 1462766 - | radical SAM domain-containing protein TERM 2322 1462892 - 1462912 + g 100 -5.4 -5.95449 | gap 1, overlap 1462884 GAGCCATTTGCAGGC CGCG-CACC GGCC GGTGACGTG TTTTTTCTTTTCTTT Dole_1226 1465743 - 1463950 - | ATPase TERM 2323 1464524 - 1464497 - G 78 -6.2 -4.63218 | gap 1, opp_overlap 1464517, overlap 1464457 1464498 1464499 TCGGCGGTAAGAAAA TCGGCCAGCCCGG CTT CCGGTCCGGC-AA GGGTTTCATCGGTGA TERM 2324 1464619 - 1464629 + g 91 -8.2 -5.14563 | opp_overlap 1464583, overlap 1464612 CGCGTTGACCAGGCC CCGG GCC CCGG TTTTTTCCTGAAAGG TERM 2325 1465489 - 1465501 + g 72 -4.8 -4.63527 | ATGGGTGCAGATCTT GGTG GCCAG CACC TTTTTGGCCTGGTCC TERM 2326 1465716 - 1465729 + g 74 -2.3 -4.91977 | CGATCTTCTTGGGAT CGGGC AGTT GTTCG TTTTGTGTTTTCATG TERM 2327 1466893 - 1466875 - g 80 -2.4 -5.26119 | gap 1, overlap 1466876 GCGGGAAAAAGAAAA GGTCCTG CTTTAC CAGG-CC TCCCATGATTCGCTG Dole_1227 1466087 - 1467391 + | diguanylate cyclase with PAS/PAC sensor Dole_1228 1467684 - 1468199 + | cob(I)alamin adenosyltransferase TERM 2328 1468216 - 1468205 - g 90 -4.4 -5.42514 | TGAGAAATGAAAAAA CAGA TCAT TCTG GTCACCGGCGGATGC Dole_1229 1468196 - 1468735 + | adenosylcobinamide-phosphate guanylyltransferase Dole_1230 1468732 - 1469454 + | cobalamin 5'-phosphate synthase Dole_1231 1469564 - 1470583 + | aminotransferase class I and II Dole_1232 1470764 - 1471417 + | hypothetical protein TERM 2329 1471450 - 1471466 + G 75 -4.3 -4.78839 | TTTGATCTTCACTGG GCCGTGA TCC TGGCGGC TTTTATTCTGGACTT TERM 2330 1471487 - 1471499 + G 100 -9.1 -5.02074 | TTCTGGACTTTTTTG TCGGG GAC CCCGA TTTTTTCGCCCATCC TERM 2331 1471721 - 1471753 + G 87 -15.6 -3.41527 | gap 1, opp_overlap 1471740 TCTTTTTCTGTATTT CGGCCC-GGTCCCTT GAAA AGGGGGCCAGGGCCG TTCTGGTGCCCCTTG TERM 2332 1471855 - 1471845 - g 74 -8.2 -4.25104 | overlap 1471846 CCGTCTGGATGAAAA GGGC GTG GCCC GGGCCACGGTGGAGA TERM 2333 1472173 - 1472132 - g 75 -8.8 -4.07568 | gap 2 GGGCTGCCTTTAAAA CGGCACTGCGGGACGGCCGT TGCC ACAGCAGTCCC--AATGCCG GATATGCCGAGGCCG Dole_1233 1471414 - 1472379 + | cobalamin biosynthesis protein CobD Dole_1234 1472403 - 1473191 + | alpha/beta hydrolase fold Dole_1235 1473333 - 1473920 + | hypothetical protein TERM 2334 1473931 - 1473952 + G 70 -4.4 -4.41047 | overlap 1473934 AATGAGGCAACGGCG CAACCAGA ACCTGA TCTGGCTG TTTTCATTCGCGGAT Dole_1236 1473917 - 1474393 + | hypothetical protein TERM 2335 1474719 - 1474690 - g 80 -2.7 -5.24129 | GTGCCGGAGAAAAAA CCGGAGCGGGT GGTACTGG AAACGCCCCGG CCTATTGAAGAAGCG TERM 2336 1475101 - 1475078 - g 70 -3.8 -4.59853 | gap 1 GGAACCGTTCAAAAA CCGTGACCC TCATGTC GGGCC-CGG CGATTCCCGGCGGAG Dole_1237 1474390 - 1475541 + | hypothetical protein TERM 2337 1476231 - 1476267 + G 83 -5.6 -5.00616 | GACGGGTTCGTTGCC TCCGACCTGGGTGCGG AGATG CCGCTCTCCGGCCAGA TTTTTTCGAAAAACG Dole_1238 1475529 - 1477535 + | hypothetical protein TERM 2338 1478020 - 1478000 - g 71 -11.1 -3.19642 | opp_overlap 1477994 1477992 1477990 ATCACCAGCGACGAA CTGGTGCAG CAC CTGCTCCAG TCCCGGCTCTATCTT TERM 2339 1478207 - 1478226 + G 71 -7.1 -4.25256 | CAGTTTATGCTGGGT CTGTCCG GTGGCG CGGGCAG TTATTTTGGTGCCGA Dole_1239 1477532 - 1479334 + | hypothetical protein TERM 2340 1479690 - 1479672 - g 70 -3.7 -4.66609 | TATCTCATTTAAAAA GGCATCG CTGAC CGTCGCC GGTGAAGTTCAGCCA Dole_1240 1479331 - 1480734 + | hypothetical protein Dole_1241 1482504 - 1480777 - | hypothetical protein TERM 2341 1482225 - 1482211 - G 95 -4.2 -5.72207 | GGCAAATGAAAAAAA GCTGAA CCG TTCGGC CAGCTCCATCACGGC TERM 2342 1482390 - 1482406 + g 71 -7.9 -4.08767 | opp_overlap 1482390 CCTTCAGGATACGAA GACCCAG CTC CCGGGTC TTTTCCCGGAATCGC TERM 2343 1482565 - 1482600 + r 100 -14.1 -3.82083 | opp_overlap 1482565 1482567 GCTGGAAAAGAAAAA GGCCGC-CGGGCGTGAC AATG GTCA-GCCCGTGCGGTC TTTGACTTGTGGTCG TERM 2344 1482600 - 1482565 - R 100 -11.9 -5.45802 | opp_overlap 1482565, overlap 1482567 GCTGGAAAAGAAAAA GGCCGC-CGGGCGTGAC AATG GTCA-GCCCGTGCGGTC TTTGACTTGTGGTCG TERM 2345 1482598 - 1482567 - R 81 -13.1 -2.90754 | opp_overlap 1482565, overlap 1482565 TGGAAAAGAAAAAGG CCGC-CGGGCGTGAC AATG GTCA-GCCCGTGCGG TCTTTGACTTGTGGT TERM 2346 1482765 - 1482739 - R 72 -10.8 -2.71712 | overlap 1482738 1482753 TGTTCCGGTGTAAAG CTTGCGTTGCAG AAC CTGCATCGCAGG TAGACGGCTTTTCAG Dole_1242 1483589 - 1482951 - | TetR family transcriptional regulator TERM 2347 1483790 - 1483780 - H 91 -6.8 -5.252 | TATTTTGACAAAAAA CCTG ACA CAGG CTATGAAAGCTGCTA Dole_1243 1483849 - 1484205 + | hypothetical protein Dole_1244 1486530 - 1484212 - | putative phytochrome sensor protein TERM 2348 1485668 - 1485685 + g 74 -6.3 -4.47707 | gap 1, overlap 1485683 CCTTCAGGCGTGGTG CACA-GGG GGA CCCATGTG TTGTTTTTCATGAAC TERM 2349 1485948 - 1485959 + g 100 -5.8 -5.73339 | overlap 1485934 1485936 TGCGCCGGCCTTTTT TGGC GGCC GCCA TTTTTTTCTGGTTGT TERM 2350 1486141 - 1486130 - G 71 -7.2 -4.18018 | opp_overlap 1486100 TGTTTGGAGGTAAAA CCGC TGCG GCGG TCCCATTTTTCGTCA Dole_1245 1486852 - 1486598 - | hypothetical protein TERM 2351 1487315 - 1487305 - g 100 -2.4 -6.20267 | opp_overlap 1487313 GGAAAAACAAAAAAA GACG ATG CGGC CCGGCAGGCCCTGTC TERM 2352 1487425 - 1487402 - g 84 -15.2 -3.01712 | opp_overlap 1487392, overlap 1487385 1487387 CGGCGGCCCTGAACA CGGACGCGGC AGTG GCCGCGGCCG AAGCCATGGGCTTTC TERM 2353 1487970 - 1488010 + G 82 -8.7 -4.52857 | opp_overlap 1487968, overlap 1487971 CGTTCGGGAGGAACG CCCTGTGCCGCCGCCGGTG GAC CCCCGCCGGCTGGGCAGGC TTTTCTATCCGCAGT TERM 2354 1487971 - 1488009 + G 75 -12.2 -3.31232 | opp_overlap 1487968, overlap 1487970 GTTCGGGAGGAACGC CCTGTGCCGCCGCCGGTG GAC CCCCGCCGGCTGGGCAGG CTTTTCTATCCGCAG TERM 2355 1488335 - 1488325 - g 77 -2.4 -5.17576 | overlap 1488327 GAGGAAGGCAAAAAA CTGG AAG CCCG AGTGGTGGAGCGGGC TERM 2356 1488714 - 1488693 - g 76 -5.1 -4.8622 | gap 1 GCTTTCAATGAAAAA GCCCATTGTG CTG CTCAA-GGGC GGGCAGACAAAAGTG TERM 2357 1489305 - 1489293 - g 90 -6.2 -5.24799 | GGACAAATACAAAAA GCCG GTGAT CGGC GTGAGCATCATGACC Dole_1246 1487194 - 1489455 + | CoA-binding domain-containing protein TERM 2358 1489720 - 1489710 - g 79 -6.8 -4.58663 | ATGATCCGCTAAAAA TGCC GGG GGCA AAGTGGTTTTCCGGG TERM 2359 1489895 - 1489915 + G 87 -12.5 -3.86015 | opp_overlap 1489880 GCCCTTGGCATTGCC CCCGGCGAC CGG GTAGCCGGG TTTATGCCCAACATG TERM 2360 1490055 - 1490070 + G 80 -4.6 -5.00616 | overlap 1490051 1490057 CTCCCAAAGTGCTGT TTGCCG CGGA CGGCTA TTTTTTCAAGGGCAA TERM 2361 1490057 - 1490068 + G 71 -7.2 -4.13561 | overlap 1490051 1490055 CCCAAAGTGCTGTTT GCCG CGGA CGGC TATTTTTTCAAGGGC TERM 2362 1491193 - 1491181 - g 71 -10.5 -3.53224 | GATCCTGTTTGTAAA GCCCG CGC CGGGC CACGAGCTGACCGAT TERM 2363 1491385 - 1491399 + G 78 -3.5 -5.14965 | opp_overlap 1491385 GGACGCTTTGAAAAA TCCGG AGTCC CTGGA TTTTTTCATGGGCCT Dole_1247 1489484 - 1491439 + | acetoacetyl-CoA synthase TERM 2364 1491498 - 1491527 + G 74 -11.4 -3.53012 | opp_overlap 1491470 ACGGCCGGCCAGGCC GCTGGCCATCTG AACCGC CTGATGGCCGGC TTTCCCGCACGGCCC Dole_1248 1491426 - 1493132 + | alpha amylase catalytic region Dole_1249 1494220 - 1493399 - | short-chain dehydrogenase/reductase SDR TERM 2365 1493969 - 1493991 + g 78 -11.3 -3.72576 | gap 1 GTTGAACATGTAGTC CAGCCGGCCG TACT CGGC-GGCTG TTTCATCCACCAGCC Dole_1250 1495059 - 1494217 - | hypothetical protein TERM 2366 1494415 - 1494427 + g 80 -10.5 -4.07568 | overlap 1494410 TGTCAGGTTCCCGGC GCCCG GCG CGGGC TTTTCAGGAAGCCCA TERM 2367 1494650 - 1494666 + g 86 -8.7 -4.56597 | AGCTCGGCATGGCCA TATGGCG GTT CGCCGTA TTTTTCCGCGGCAGC Dole_1251 1496074 - 1495139 - | membrane protein Dole_1252 1496654 - 1496328 - | DNA polymerase beta subunit TERM 2368 1496628 - 1496639 + g 72 -4.4 -4.63486 | TCTTCTTATATCGCG GATG ACGG CATC TTTTGTTGGAGCCAT TERM 2369 1496976 - 1496935 - H 71 -4.5 -4.64766 | gap 1, opp_overlap 1496937, overlap 1496936 1496937 GCGAGATCTGAAAAA GTTGGTCTCC-TGAGTAATT AGC ATTCACTCATGGAGACCATT TTTTATTTTAAAACC TERM 2370 1496974 - 1496937 - H 75 -11.5 -2.62545 | gap 1, opp_overlap 1496937, overlap 1496936 1496935 GAGATCTGAAAAAGT TGGTCTCC-TGAGTAATT AGC ATTCACTCATGGAGACCA TTTTTTATTTTAAAA TERM 2371 1496937 - 1496974 + H 100 -10.2 -5.79595 | gap 2, opp_overlap 1496937 1496936 1496935 GAGATCTGAAAAAGT TGGTCTCC-TGAGT-AAT TAGC ATTCACTCATGGAGACCA TTTTTTATTTTAAAA TERM 2372 1497021 - 1496990 - H 100 -14.6 -4.13767 | opp_overlap 1496990 TTTTTTATTTTAAAA CCTCCATGAGTGAT ACCC ATCATTCATGGAGG TTTTTTTGTTTTGAA TERM 2373 1496990 - 1497021 + H 100 -16.8 -6.09196 | opp_overlap 1496990 TTTTTTATTTTAAAA CCTCCATGAGTGAT ACCC ATCATTCATGGAGG TTTTTTTGTTTTGAA Dole_1253 1497050 - 1497385 + | hypothetical protein TERM 2374 1498313 - 1498294 - g 86 -5 -5.22137 | AAGCACAAAAGAAAA CAGTGC GGAGCCGG GCACTG GGGCAGATGCCGAAT Dole_1254 1497401 - 1498330 + | hypothetical protein TERM 2375 1498347 - 1498331 - f 71 -8.7 -3.64487 | GCAGATGCCGAATAA CCCACAG TTG CTGTGAG AGGCAACGTGTTGCA Dole_1255 1498384 - 1498662 + | hypothetical protein Dole_1256 1498671 - 1498925 + | hypothetical protein TERM 2376 1500284 - 1500267 - g 80 -4.9 -4.95302 | opp_overlap 1500267 CGAAACACAAGAAAA TTTCTGC ACCC GCAAAAA ATCTTCTACTTCAGC TERM 2377 1500587 - 1500551 - g 84 -3.6 -5.27476 | gap 1, overlap 1500552 1500553 1500561 1500562 GGCAATAAAACAAAA GCTGCCAGAATGCTGGG TATG CCCAGCTATCAGACA-C TGACCAACTGGCTCA Dole_1257 1499111 - 1500622 + | putative sigma54 specific transcriptional regulator TERM 2378 1501191 - 1501169 - g 82 -9 -4.42386 | TGGCCATCCATAAAA CCCTCTGGCA TTT TGCCGGTGGG AATAACCGAGCCCTT TERM 2379 1503004 - 1502990 - g 73 -3.5 -4.81083 | gap 1, opp_overlap 1502998 1503000, overlap 1502994 CGCAACTATTAAAAA CCGACC TGGA GG-CGG TAAAGCACCACCTCT Dole_1258 1500676 - 1503039 + | type III restriction protein res subunit TERM 2380 1503380 - 1503413 + G 72 -4.5 -4.61231 | gap 1, opp_overlap 1503351, overlap 1503351 1503381 1503389 CCCCAAAAAGGGCTG GGCGATG-ATCTGCTG GCT CAGCGGTTTCGTCGCA TTTTTGACAATGTAC TERM 2381 1503562 - 1503583 + G 81 -8.7 -4.36914 | gap 1, opp_overlap 1503538, overlap 1503554 ACGGGTGGCCGCCGA CTCGGCCGGC TAT GCTGG-CGAG TTTTATACCCAGCGC Dole_1259 1503056 - 1504528 + | N-6 DNA methylase TERM 2382 1505031 - 1505080 + G 83 -14.9 -2.71011 | overlap 1505047 GGTGGAGGAGATTGA GGGACTACGGGCGGAGGCCATGC GGGA GCGTGGCTATCTCCTGGAGTCCC TGATTGAGGCAGAAT Dole_1260 1504531 - 1505688 + | restriction modification system DNA specificity subunit TERM 2383 1506040 - 1506021 - g 74 -6.4 -4.5442 | GCGCCAACCAGAAAA TTGGGAGA TCTC CCCCCCAA AATATTGGCTAATAC TERM 2384 1508927 - 1508938 + G 80 -4.4 -4.89852 | overlap 1508916 GATCGGTGAAGAATC TCCT TTTG AGGA TTTTTGTGAATATGC Dole_1261 1505694 - 1509782 + | N-6 DNA methylase TERM 2385 1509955 - 1509982 + G 77 -2 -5.07567 | opp_overlap 1509947 GCCGAAAGAATGCGT CAGCCGGATT CGCCATAT AATGCGGTTG TTTTTTGGGATCTGG TERM 2386 1510424 - 1510442 + G 70 -11.8 -2.71712 | opp_overlap 1510428, overlap 1510423 TAGTAGCGCTTATGA GTAAGGTC CCG GACCTTAC GTTTACAAGCGGAGC TERM 2387 1510711 - 1510680 - g 100 -8.7 -4.96762 | opp_overlap 1510682 GATAGAGCACAAAAA GGTCGACGCTGCC GATATT AACAGCGTTGACC GTAAGTGTCTCGAGG Dole_1262 1509775 - 1511382 + | hypothetical protein Dole_1263 1511406 - 1512050 + | hypothetical protein Dole_1264 1512143 - 1512979 + | hypothetical protein Dole_1265 1512979 - 1513443 + | phosphatidylglycerophosphatase A Dole_1266 1513445 - 1514026 + | 2'-5' RNA ligase TERM 2388 1514454 - 1514438 - g 73 -3.5 -4.84359 | opp_overlap 1514439, overlap 1514439 CGAGGCCCAGAAAAA GGGTGGC ATT GCCGCCT TTATCGACGCCGAGC TERM 2389 1514439 - 1514453 + G 75 -9.2 -3.85698 | opp_overlap 1514438 1514439 GAGGCCCAGAAAAAG GGTGGC ATT GCCGCC TTTATCGACGCCGAG TERM 2390 1514648 - 1514612 - g 71 -12.9 -2.52676 | CATCCTGGTAATCGA CTCGGTGGCGGCCCTGG TGC CCAAGGCCGAGATCGAG GGCGAGATGGGCGAC Dole_1267 1514181 - 1515257 + | recA protein TERM 2391 1515404 - 1515361 - g 100 -14.4 -4.12188 | gap 1 GGACTATTTTGAAAA CCAGGGCCACC-GGGTGGTGC GCA GCTCCTCCCTGGTGCCCCAGG CCGATCCCACCCTGC TERM 2392 1516970 - 1516948 - g 83 -7.6 -4.62471 | overlap 1516949 CGGAACGGTGAAAAA GGGCCAGACC ATT AGCCTGGCCG TGGATGAGGACCGGC TERM 2393 1516969 - 1516949 - g 73 -11.1 -3.37 | overlap 1516948 GGAACGGTGAAAAAG GGCCAGACC ATT AGCCTGGCC GTGGATGAGGACCGG TERM 2394 1517221 - 1517185 - g 71 -7.9 -4.09685 | overlap 1517170 1517211 CCGGATTCGGGAAAA CCGGGCCGTGACCATCT CCG AGATGAGCATGGACCAG GCCATGGAACAGGGG Dole_1268 1515314 - 1517944 + | alanyl-tRNA synthetase TERM 2395 1517995 - 1517965 - f 79 -9.7 -3.92075 | gap 1, opp_overlap 1517951 1517988, overlap 1517966 ACCGCCATCGACAAA TGTAGG-GGCGGTC TTCA GACCGCCACCCACC CGGGATGTCATTTCC TERM 2396 1517994 - 1517966 - f 86 -13.2 -2.94924 | gap 1, opp_overlap 1517951 1517988, overlap 1517965 CCGCCATCGACAAAT GTAGG-GGCGGTC TTCA GACCGCCACCCAC CCGGGATGTCATTTC TERM 2397 1518161 - 1518145 - g 83 -8 -4.65895 | opp_overlap 1518145, overlap 1518147 1518149 GGCCTGATGGAAAAA TCCACC CTGCT GGTGGA TTTTGATCCCCAGGG TERM 2398 1518145 - 1518161 + G 74 -8 -4.25104 | opp_overlap 1518145 1518147 1518149 GGCCTGATGGAAAAA TCCACC CTGCT GGTGGA TTTTGATCCCCAGGG Dole_1269 1518049 - 1518789 + | cobyrinic acid ac-diamide synthase TERM 2399 1519143 - 1519093 - g 71 -11 -3.29511 | overlap 1519111 1519112 TTGACGTGGTGACAA CAGCGGCCGAGGAAAAATCTCCCA CCA CGGAGGCCTCTTCCCCGGCGGCCG CGGAACCGCCCGCCG Dole_1270 1518831 - 1519322 + | hypothetical protein TERM 2400 1519502 - 1519517 + F 85 -7.6 -4.72696 | opp_overlap 1519500 GTTTTATTGAATATG CTATCG GGAT CGATAG TTGTTTTTGTTTCGA TERM 2401 1519651 - 1519639 - g 76 -4.8 -4.7416 | opp_overlap 1519648, overlap 1519641 1519642 GGAAAAGGTGAAAAA CAGC GTACG GCTG GATGCCGAAGACGGC TERM 2402 1519648 - 1519673 + G 74 -11.1 -3.53012 | opp_overlap 1519639 1519642 1519641 GAAAAACAGCGTACG GCTGGATGCCG AAGA CGGCATGCGGC TTTACGAGAGCAACG TERM 2403 1519701 - 1519716 + G 71 -10.4 -3.48276 | opp_overlap 1519687 ACGACCTTGCCGGCA TCGGCG GCAT CGCCGA TTATGTGCGCAAAAA TERM 2404 1519902 - 1519889 - g 93 -5.2 -5.47821 | opp_overlap 1519896 1519897, overlap 1519897 AGTGACGCAAAAAAA CCGG AAAATG CCGG GGTCCGGGAGTTTCA TERM 2405 1520014 - 1519987 - g 78 -6.1 -4.56597 | opp_overlap 1519987 CCGGGCTCTCAAAAA GGCCCGGCCCG ATGCCA CGGTCAAGGCC TTTACCGCCGTTGAG TERM 2406 1520318 - 1520332 + G 80 -9.2 -4.1822 | CTTCAGGACACCACC GGCGGG TTT TCCGCC TTTATTCCCCTGGCC Dole_1271 1519583 - 1520686 + | radical SAM domain-containing protein Dole_1272 1520688 - 1521755 + | radical SAM domain-containing protein TERM 2407 1521759 - 1521779 + T 76 -7.5 -4.45168 | overlap 1521758 CAGTACCACTGACAT CCGGTCAGT GTG ACGGATCGG TTTCTGTTTTCACAG Dole_1273 1524444 - 1521805 - | TPR repeat-containing protein TERM 2408 1523472 - 1523503 + g 78 -4.3 -5.00616 | opp_overlap 1523469 1523470 TCACTGCAAATATGG CCACGCCGGCA ACCGGCCCTC TGCCGACGCGG TTTTTTGCGGCAAAG TERM 2409 1523567 - 1523556 - G 70 -2.2 -4.77036 | overlap 1523560 CGGCAGCAGGAAAAA GGTA TTGC CACC CGGCGGTGGAATCAA TERM 2410 1523920 - 1523899 - G 95 -2.1 -5.83211 | overlap 1523903 GATGAAAAGAAAAAA GGAAGCCCC ATAG AGGGCATAC GCATTCTTCTTCGGA TERM 2411 1524124 - 1524089 - G 71 -6.9 -4.11472 | gap 3 TGCAAAGCAAAAACA GCGGCCGCCAGCCATGCC CAG GGCA-GGCC--CAGCCGC ATCAGGATCAGCCAG TERM 2412 1524480 - 1524490 + r 71 -4.6 -4.58283 | overlap 1524469 GTGCCTGCCCCTCAT CGGG CGG TCCG TTTTTCCCGGAGTTG Dole_1274 1526155 - 1524476 - | TPR repeat-containing protein TERM 2413 1524827 - 1524837 + g 76 -4.6 -4.74103 | CTGAAAACAGGCGAC CGCG CTT TGCG TTTTTCCCTTGCCGG TERM 2414 1526368 - 1526348 - H 73 -9.7 -3.36569 | opp_overlap 1526363, overlap 1526346 1526363 TCAACTCGTGAAATA TCCTGGCTA TAA TAGCCGGGA TGACGCCGGTTCTCA TERM 2415 1526670 - 1526702 + G 78 -11.2 -3.68827 | gap 1, overlap 1526663 1526671 CACCTGGAGCTTTCC GCCCTGGCCGGACGG CTTT CCA-CCGGCCAGGGG TTTGAATCGTGGGTG TERM 2416 1526671 - 1526701 + G 80 -14.7 -2.80975 | gap 1, overlap 1526663 1526670 ACCTGGAGCTTTCCG CCCTGGCCGGACGG CTTT CCA-CCGGCCAGGG GTTTGAATCGTGGGT TERM 2417 1526859 - 1526885 + G 90 -12.2 -4.10161 | overlap 1526862 ACGGCGGATCTGTTT CGGGATGCCGGC CTG GCCGGCGTCTGG TTTTCCGAGGTGCTG TERM 2418 1526862 - 1526882 + G 83 -14.7 -3.08508 | overlap 1526859 GCGGATCTGTTTCGG GATGCCGGC CTG GCCGGCGTC TGGTTTTCCGAGGTG Dole_1275 1526463 - 1527662 + | amidohydrolase TERM 2419 1527710 - 1527724 + G 78 -11.4 -3.64703 | opp_overlap 1527704 1527703 TATATCAATGTGGCA CCCGTG TAC CACGGG TTTGACTCCGGCCAG TERM 2420 1527741 - 1527751 + G 70 -2.4 -4.72863 | overlap 1527731 1527739 TTGACTCCGGCCAGG TGGC CGC GCCC TTTTCCTTTATTTCA TERM 2421 1527809 - 1527824 + G 74 -6.8 -4.25681 | ATTTTAAACAGCGCG CTGGAC ATCA GTCCGG TTTCTTCGATTGCCT TERM 2422 1528178 - 1528195 + G 72 -4.7 -4.65933 | overlap 1528163 GGCCGGTTGTGGCAG GAGCTGG CGGG CCGGCCC TTTGTTTTCGGCCTG TERM 2423 1528416 - 1528426 + G 77 -2.4 -5.07053 | opp_overlap 1528410 CGGAACAGATCGCCG GGGC CGA GACC TTTTTTGACATGCTT TERM 2424 1528465 - 1528475 + G 91 -8.2 -5.0666 | overlap 1528456 GGGCATGCTGGCTGA GGCG GTC CGCC TTTCTTTTTTCAATC Dole_1276 1527665 - 1528501 + | hypothetical protein Dole_1277 1529371 - 1528523 - | hypothetical protein TERM 2425 1529058 - 1529083 + g 70 -3.9 -4.67552 | gap 1, overlap 1529063 1529068 GGCACCGCGAGTGTC GCGCCG-GCAAG CGG CTTGCGCTGCCC TTCTTTTTTGGTCAC Dole_1278 1530116 - 1529358 - | purine phosphorylase family 1 TERM 2426 1529744 - 1529755 + g 79 -7.2 -4.56597 | AGCGGTTGGTGATCT CCCC GGCA GGGG TTTTTAGAACCGGAA TERM 2427 1530145 - 1530169 + H 74 -4.3 -4.91977 | overlap 1530147 CGGTTTATCGGTTTC GC-CGGCCGGT TCGCT ACCG-CCGTGC TTTTCTGTTTTCATA TERM 2428 1530875 - 1530865 - g 74 -8.2 -4.11216 | TGCCGACCTGGAAAA CCCG GAC CGGG TCGTGATCGGTTCCC Dole_1279 1530341 - 1531723 + | UDP-glucose 6-dehydrogenase TERM 2429 1531787 - 1531771 - g 84 -3.6 -5.29782 | opp_overlap 1531779 1531784, overlap 1531773 CACATGGATAAAAAA CGGGTC CTGGT GACCGG CGGCGCCGGTTTTCT TERM 2430 1531784 - 1531796 + G 88 -10.5 -4.41548 | opp_overlap 1531773 1531771, overlap 1531779 AACGGGTCCTGGTGA CCGGC GGC GCCGG TTTTCTGGGGTCTCA Dole_1280 1531750 - 1532709 + | NAD-dependent epimerase/dehydratase TERM 2431 1532779 - 1532756 - g 95 -6.1 -5.58454 | gap 1, opp_overlap 1532778 GTGACATTAAAAAAA GCCC-TGATA ACCGG TATCACGGGC CAGGACGGCGCCTAC Dole_1281 1532741 - 1533904 + | GDP-mannose 4,6-dehydratase Dole_1282 1533904 - 1534866 + | NAD-dependent epimerase/dehydratase Dole_1283 1535021 - 1535599 + | AsnC family transcriptional regulator TERM 2432 1535742 - 1535760 + F 71 -3.8 -4.7254 | overlap 1535739 TTTACTACAGAGGGA TAGAACGG TAT CCGTTTGA TTTTTCGTCGACAGT TERM 2433 1535900 - 1535918 + G 70 -4.4 -4.4767 | overlap 1535891 1535892 1535901 TTGCGGGCCGAGGCC TCCCGCGG ATA TCTCGGGG TTTTGTGGTGGGTCC TERM 2434 1536345 - 1536362 + G 80 -2.7 -5.27335 | opp_overlap 1536346 1536348, overlap 1536346 1536346 AGGCCATCTTGCAAA ACATCAT GATG ATGATGC TTTTTCTTTCCGGCG Dole_1284 1535801 - 1536598 + | ABC-2 type transporter Dole_1285 1536611 - 1537366 + | ABC transporter-related protein TERM 2435 1537716 - 1537706 - g 70 -2.4 -4.71828 | opp_overlap 1537706 ATGGCACGAAGAAAA GACG CGT CGGC CTTTGGCTTTAAGGC Dole_1286 1537403 - 1538191 + | hypothetical protein TERM 2436 1538763 - 1538724 - g 86 -8.6 -4.61873 | gap 1, opp_overlap 1538724 1538730, overlap 1538726 1538749 1538751 CTGCAGAAAGTAAAA CTGGCCGATGCCGGCCT GGTAAAA ACACCGGCACCGGC-AG TCTATCCTGCCGGTG TERM 2437 1538784 - 1538749 - g 100 -13.4 -4.56597 | opp_overlap 1538724 1538730, overlap 1538724 1538751 CCGGCCTGGTAAAAA CACCGG-CACCGGCAG TCTATC CTGCCGGTGACCGG-G ACTGCCTGCAATCAC TERM 2438 1538783 - 1538751 - g 100 -17.1 -3.90048 | gap 1, opp_overlap 1538724 1538730, overlap 1538724 1538749 GGCCTGGTAAAAACA CCGG-CACCGGCAG TCTATC CTGCCGGTGACCGG GACTGCCTGCAATCA TERM 2439 1539501 - 1539521 + G 70 -3.9 -4.57073 | overlap 1539503 CGGGGTTATGCTGTT GTTCAGCCT GAA AAGCTGACC TTTTTACAGCAGGTC Dole_1287 1538325 - 1539806 + | capsular polysaccharide biosynthesis protein-like protein TERM 2440 1540299 - 1540325 + G 79 -13.8 -3.03771 | overlap 1540302 TCACGGTGGAGGATT TCGCGGTCATTG CAA CAATGACCGTGG TGTTGCCGGGTGTAA TERM 2441 1540302 - 1540322 + G 80 -14.1 -2.74192 | overlap 1540299 CGGTGGAGGATTTCG CGGTCATTG CAA CAATGACCG TGGTGTTGCCGGGTG Dole_1288 1539803 - 1540555 + | hypothetical protein Dole_1289 1540631 - 1541047 + | WxcM domain-containing protein Dole_1290 1541044 - 1542162 + | glutamine--scyllo-inositol transaminase TERM 2442 1542404 - 1542419 + G 76 -3.2 -4.96501 | gap 1 AGAGTGGGTGTTCAA CCTGTGG CCC CC-CGGG TTTATTTTTCTGGAA TERM 2443 1542806 - 1542816 + G 76 -4.6 -4.75219 | TCTGCTTGTCCTGAC CGCT TGG GGCG TTTTGTTGGTGATTG TERM 2444 1542928 - 1542958 + G 73 -3.2 -4.82901 | TGGCCCACATCACAA TGGTTCCATGGAGA ATT TATCGGTGGACCCA TTTTTATGAAGGAAA Dole_1291 1542159 - 1543517 + | hypothetical protein Dole_1292 1543560 - 1544258 + | NAD-dependent epimerase/dehydratase Dole_1293 1544242 - 1545213 + | ribonuclease III Dole_1294 1545210 - 1545470 + | hypothetical protein TERM 2445 1546986 - 1546964 - g 88 -5.4 -5.21709 | GGGCATATGAAAAAA GCACTCAGCC AGA GGCCGGACGC CTGGGCCTGGGACGG Dole_1295 1545502 - 1547070 + | glycosyl transferase group 1 TERM 2446 1547077 - 1547066 - g 76 -3 -4.88736 | CAGCATGGAGAAAAA GATA AATG TATC GGTGGTTGTCCCGGT TERM 2447 1547899 - 1547910 + G 84 -2.2 -5.34555 | opp_overlap 1547898 TCATCGACAATTTAC CCTT GGAA GAGG TTTTTTATGGTGTGA Dole_1296 1547055 - 1548086 + | glycosyl transferase family protein TERM 2448 1548866 - 1548881 + G 100 -6 -5.93809 | opp_overlap 1548858, overlap 1548861 AGGACAAGGGGCCGC GGCCGC CGGA GCTGCC TTTTTTTTATGACGG TERM 2449 1549452 - 1549464 + G 71 -7.7 -4.07568 | GCCGGCACCGGCCAA CCTGT CGG ACAGG TTTTCCCCCGAACCC Dole_1297 1548127 - 1549587 + | hypothetical protein TERM 2450 1549945 - 1549970 + G 89 -6.7 -5.03314 | gap 1, opp_overlap 1549943, overlap 1549944 1549945 ATATGGCACACCATC CCG-AGGCCGGC ATT GCCGGCCCGCAG TTTTTTAACCCTGAC Dole_1298 1549620 - 1550489 + | glycosyl transferase family protein TERM 2451 1550913 - 1550903 - g 74 -2.4 -4.92783 | opp_overlap 1550903 AATGCAGGACAAAAA CGCC AGG GGTG CTTGTCACGGGTGCC Dole_1299 1550872 - 1551858 + | NAD-dependent epimerase/dehydratase Dole_1300 1551892 - 1553016 + | acyltransferase 3 Dole_1301 1553039 - 1554043 + | glycosyl transferase family protein TERM 2452 1554855 - 1554844 - g 72 -4.4 -4.57341 | opp_overlap 1554844 AAGGCCGGCGAAAAA CTCT ACGA AGAG TTGATGACCGACGAG Dole_1302 1554040 - 1555107 + | polysaccharide biosynthesis protein CapD TERM 2453 1555675 - 1555687 + G 72 -6.2 -4.32857 | opp_overlap 1555672, overlap 1555672 TATCGAGCACAAGGG CCGG AAGGA CCGG TTTCTGTTTCCCCGG TERM 2454 1556237 - 1556250 + G 91 -4.5 -5.52986 | overlap 1556221 CATTACCTGACCGAT GAGGT GCTG GCCTC TTTTTTTCATGCCGT Dole_1303 1555136 - 1556323 + | UDP-sulfoquinovose synthase TERM 2455 1556709 - 1556697 - g 74 -6.9 -4.29953 | overlap 1556694 AAAGTACCAAAAGAA CCGCG CCC CGCAG CTTGGCCTCTGGCTC Dole_1304 1556659 - 1556877 + | hypothetical protein TERM 2456 1557291 - 1557323 + F 73 -3.2 -4.84359 | opp_overlap 1557292 1557293, overlap 1557292 1557294 CATTTGTTCATTAGA ATGCGCACGGCGGG CAGGT CCTGCGGGGCGTAA TTTTTGTAACCATAA TERM 2457 1557653 - 1557679 + G 71 -7.8 -4.03234 | CTGATGGTGCCGCCG GAGATGGGCGGC CAG GGCGCCCCTCCC TTTGTGTCGGCCGCG Dole_1305 1557362 - 1559176 + | acyl-CoA dehydrogenase domain-containing protein TERM 2458 1559234 - 1559199 - f 75 -10.3 -3.28712 | opp_overlap 1559179 1559203, overlap 1559202 TGTTGTGTTGTATAA CCATGCGGCGTCCGG TTTTTG CCGGACGCCGCTTTT TTCGAAAAACCCTAT TERM 2459 1559231 - 1559202 - f 100 -16.4 -2.82623 | opp_overlap 1559179 1559203, overlap 1559199 TGTGTTGTATAACCA TGCGGCGTCCGG TTTTTG CCGGACGCCGCT TTTTTCGAAAAACCC TERM 2460 1559203 - 1559230 + F 100 -20.6 -5.00616 | opp_overlap 1559202 1559199, overlap 1559179 GTGTTGTATAACCAT GCGGCGTCCGGT TTTT GCCGGACGCCGC TTTTTTCGAAAAACC TERM 2461 1559435 - 1559471 + G 80 -10.7 -3.99819 | opp_overlap 1559434 GATTGGTGAGATGAT GGTCCGGGGCGCGCC CCTGATC GGCGTGACCGGGGCC TTTGGTGTCTTTATT Dole_1306 1559280 - 1560389 + | eIF-2B alpha/beta/delta-related protein Dole_1307 1560483 - 1560761 + | hypothetical protein TERM 2462 1560756 - 1560745 - T 71 -4.4 -4.72029 | overlap 1560740 GCGAACCCAAGAAAA TGGA TATT TCCA AGTAACGGACCTGTA TERM 2463 1560791 - 1560822 + T 100 -20.2 -3.65351 | gap 1, opp_overlap 1560809 TGTTTTTGTTTTTTA CCGGGCGG-CGCGGA GAA TCCGTGGCCGCCCGG TTTGCGTGGACGTCA Dole_1308 1562025 - 1560835 - | hypothetical protein TERM 2464 1560903 - 1560889 - G 80 -2.7 -5.26316 | overlap 1560890 1560898 GTATTTGAGAAAAAA TCCGG AAAGG CCGGC AGGACTTGCCTCCAG TERM 2465 1561697 - 1561709 + g 85 -3.3 -5.37345 | opp_overlap 1561697 CCGCCCGACTCAAAT TCGGC ATA GGCGA TTTTTTCTGCTTCCA Dole_1309 1562502 - 1562071 - | hypothetical protein Dole_1310 1563111 - 1562542 - | hypothetical protein TERM 2466 1562824 - 1562869 + g 79 -7.5 -4.63527 | opp_overlap 1562833 GGGCGTGCCCGGCCG CTGCGCAAACATCAGGGGC ACCAGCCG GCCCATGATGGTGGAGCAG TTTTTCCCGTAGTAA TERM 2467 1562998 - 1562988 - G 74 -8.2 -4.11404 | GCCACAGGATATAAA GGGC CAT GCCC ACAATCACCGGCCAG TERM 2468 1563864 - 1563884 + G 70 -4 -4.64657 | gap 1, overlap 1563862 1563863 1563868 TCTATGGGAAAGTCC GCAT-GGCA GTAT TGCCTGTGC TTTTTCCGGGTTTAA Dole_1311 1563343 - 1564323 + | hypothetical protein TERM 2469 1564450 - 1564468 + T 71 -6.6 -4.14725 | overlap 1564443 AAAATGCTTCCATTC CTGGGTCT GTG AGCCCCGG TTTATGATTTCGGTG TERM 2470 1564560 - 1564594 + T 71 -8.4 -3.66654 | opp_overlap 1564562, overlap 1564561 GCCTTTGTGAAAAAA AACCGGGCGACCCC CTGTTGC GGGTTCGCCCGGCG TTTGAAATTCCGATA TERM 2471 1564561 - 1564593 + T 76 -11.9 -2.79671 | opp_overlap 1564562, overlap 1564560 CCTTTGTGAAAAAAA ACCGGGCGACCCC CTGTTGC GGGTTCGCCCGGC GTTTGAAATTCCGAT TERM 2472 1564592 - 1564562 - T 100 -15.4 -5.75342 | opp_overlap 1564561 1564560 CTTTGTGAAAAAAAA CCGGGCGACCCC CTGTTGC GGGTTCGCCCGG CGTTTGAAATTCCGA Dole_1312 1566138 - 1564618 - | hypothetical protein TERM 2473 1566099 - 1566081 - G 72 -5.2 -4.42386 | opp_overlap 1566095 TCTGTACTGAGAAAA GCGCTACA ACC CACAGCGC TACGCATATTACCGA TERM 2474 1566393 - 1566353 - g 82 -6.6 -4.78512 | overlap 1566358 1566392 AAAAAGAAAGCAAAA CCCAAGGTGCCGGTCGCC GCGGA AGAGACCGGCTCCAAAGG TGAGGCCACCCGGCA TERM 2475 1566723 - 1566747 + G 78 -4.3 -5.0133 | gap 1, opp_overlap 1566721 1566723, overlap 1566727 CCGGCCACATGAAGA TCGA-CCCCG ACCCGC CGGGGTTTGA TTTTTTCACCCGCTA TERM 2476 1566727 - 1566742 + G 76 -7.5 -4.42765 | opp_overlap 1566721 1566723, overlap 1566723 CCACATGAAGATCGA CCCCG ACCCGC CGGGG TTTGATTTTTTCACC Dole_1313 1566326 - 1567021 + | TetR family transcriptional regulator TERM 2477 1567413 - 1567442 + F 86 -13.5 -3.04322 | gap 1 AACGGGGCCGTGGCC GCCGGCCG-GGTCG GGT CGGCCTCGGCCCGC TATTACGGCATTCCC Dole_1316 1568007 - 1569242 + | hypothetical protein Dole_1317 1570175 - 1569330 - | hypothetical protein Dole_1318 1571414 - 1570398 - | hypothetical protein TERM 2478 1571610 - 1571582 - R 100 -21.8 -3.85698 | opp_overlap 1571574 GGGGGGGGGGAGAAA CGGCCCGGTCTG CTATT CAGACCGGGCCG GGTGACGCTATTGAA Dole_1319 1572052 - 1571618 - | hypothetical protein TERM 2479 1571766 - 1571752 - G 87 -7 -4.91109 | GGCCCATCACAAAAA GGCCGC CCT GCTGCC AGAGATCGCCGGCCT Dole_1320 1573897 - 1572524 - | histidine kinase TERM 2480 1572558 - 1572569 + g 71 -7.2 -4.18018 | opp_overlap 1572558 1572557 ATACGAAAACCAAAT CGGG TAAT CCCG TTTTCCCTCGCGCAG TERM 2481 1572733 - 1572697 - G 78 -6.3 -4.57837 | opp_overlap 1572698, overlap 1572698 ACAGGGGCTCAAAAA TCCGCTCCCGGTCTGCC TCG GGCACACCGGGCCCCGT GTCTGAGACAAAAAA TERM 2482 1572771 - 1572750 - G 89 -2.1 -5.71712 | opp_overlap 1572754 1572755, overlap 1572751 1572754 TCTGAGACAAAAAAA CGCACGCGG TCTC CCGCATTCT CCGCGCCGATTGTTA Dole_1321 1574799 - 1574095 - | two component transcriptional regulator TERM 2483 1574147 - 1574167 + g 86 -5.4 -5.0538 | gap 1 TTGATATAGCGGGGC GC-GGAGGG GTCA TCCTCCAGC TTTTTTCGAATGCGG Dole_1322 1577432 - 1574838 - | glycogen/starch/alpha-glucan phosphorylase TERM 2484 1575150 - 1575122 - G 83 -5.9 -5.00616 | gap 1 CGCCGCCGGAAAAAA GGCCGCC-GGAG ATCATG CCCATGGCGGCC CGCAGCTCTTCGTTT Dole_1323 1578202 - 1577579 - | TetR family transcriptional regulator TERM 2485 1578016 - 1578026 + g 95 -6.8 -5.61881 | opp_overlap 1578011 1578010, overlap 1578011 1578010 1578014 TTTCCAGAATCTCCA GCAG GAG CTGC TTTTTGTTTTTAAAA TERM 2486 1578310 - 1578327 + H 71 -2.8 -4.94058 | opp_overlap 1578310, overlap 1578305 AAAATTTCTTGACAA TATGAA TCTTAT TTCATA TTTTCTTTGCATTCA TERM 2487 1578818 - 1578785 - g 77 -11.7 -3.53012 | gap 1, opp_overlap 1578795 1578800 1578804 CGGCCGGCCGGGAAA CTGCGACAACCAGGCC ATG GGCC-GGTTTTCGCCG GGCATGTTTTTAGGC Dole_1324 1578372 - 1579595 + | alcohol dehydrogenase TERM 2488 1579905 - 1579919 + G 84 -4.2 -5.19879 | opp_overlap 1579894 1579896, overlap 1579903 TAAAGACCGCCGACG GCCG CCATGCC CGGC TTTTTGTGTTTGACC Dole_1325 1579781 - 1580137 + | hypothetical protein TERM 2489 1580434 - 1580400 - g 91 -12.9 -4.03234 | gap 1, opp_overlap 1580400 1580399 GTCGGTGTACAGAAA CGAGCCCGG-CGTC TGCCTGGT GACGGCCGGGCCCG GTTTTACCAACGCCA Dole_1326 1580200 - 1581873 + | thiamine pyrophosphate binding domain-containing protein TERM 2490 1581895 - 1581928 + F 80 -6.6 -4.79949 | overlap 1581898 GGAACTGCCTTTTCT TTACAGGGGTGTCG ATTGCC CGGCGCCCCTGTTC TTCTTTTTTTCACGG TERM 2491 1581898 - 1581925 + F 100 -12.7 -4.48073 | overlap 1581895 ACTGCCTTTTCTTTA CAGGGGTGTCG ATTGCC CGGCGCCCCTG TTCTTCTTTTTTTCA TERM 2492 1581986 - 1582017 + F 100 -17.3 -4.9934 | opp_overlap 1582002 1582005 1582006, overlap 1581999 GTGCCGGGCTGTTTT GCCGGGGCCGG GACAACAAGG CCGGCCCCGGC TTTTTGTAATGTTAT TERM 2493 1582285 - 1582298 + G 78 -3.1 -5.06414 | CGAGGACTGCGCTGA TTCGT TTCA ACGGA TTTTTGTTCACACGG Dole_1327 1582163 - 1582462 + | hypothetical protein Dole_1328 1584188 - 1582623 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 2494 1582826 - 1582816 - G 85 -3.2 -5.45802 | TCCGGAAAAGAAAAA TCAC TGG GCGA CAGAATGGCGGACTG TERM 2495 1584143 - 1584163 + g 76 -13.9 -2.75596 | overlap 1584139 1584138 TCCCGGGAATGTCTT CGGCCCGCC AGC GGCGGACCG TGATCTGTGATTTTG TERM 2496 1584349 - 1584331 - H 80 -4.6 -5.0538 | GTGGACTGCAAAAAA CTTTGACA GGG TGTAAAAG CGCCTGACAGGGGAT Dole_1329 1584579 - 1585502 + | UspA domain-containing protein TERM 2497 1585508 - 1585529 + F 81 -12.3 -3.09273 | gap 1, opp_overlap 1585503, overlap 1585509 GATTACATAACCGTG CC-GCCGGTC GTC GACCGGCCGG TGTATATTAAAACAG TERM 2498 1585509 - 1585531 + F 72 -10.5 -3.06696 | opp_overlap 1585503, overlap 1585508 ATTACATAACCGTGC CGCCGGTCG TCGAC CGGCCGGTG TATATTAAAACAGGG TERM 2499 1586394 - 1586409 + G 76 -4.6 -4.72272 | GGGCCGGCGGGGCGT CTCCCG GGTT CAGGAG TTTTTCATGGGCCGG Dole_1330 1585555 - 1586478 + | UspA domain-containing protein TERM 2500 1586489 - 1586512 + F 70 -8 -3.92746 | overlap 1586487 1586490 TCTGAGATTGGTTTT GGCGACACCG GAAC CGGAGTCGCG TGTTTTTACACTAAA TERM 2501 1586490 - 1586511 + F 78 -11.5 -2.95166 | overlap 1586489 1586487 CTGAGATTGGTTTTG GCGACACCG GAAC CGGAGTCGC GTGTTTTTACACTAA Dole_1331 1586542 - 1587453 + | UspA domain-containing protein TERM 2502 1587554 - 1587593 + T 100 -25.3 -4.42788 | opp_overlap 1587541 1587574 AACCTTGTGTTCGCC CTTTGATGGGGGCAACC ACAGAG GGTTGCCCCCATCAAAG TTTTGTCCCCTTCCC Dole_1332 1588495 - 1587677 - | uncharacterized protein involved in formate dehydrogenase formation TERM 2503 1588226 - 1588236 + g 80 -4.6 -5.02074 | overlap 1588218 CTGAATCTCTTCGGT TGCC GGG GGCG TTTTTTCAGCGATCA Dole_1333 1589312 - 1588533 - | Fe-S-cluster-containing hydrogenase components 1-like protein TERM 2504 1588631 - 1588603 - G 86 -5.9 -5.10029 | overlap 1588618 ATGAAGCTCAAAAAA CCGGTGGCCAG TACAGCG CCGGCAACCAG CCCGGAGGGGGCGGT Dole_1334 1591846 - 1589324 - | formate dehydrogenase, alpha subunit TERM 2505 1589420 - 1589441 + g 78 -4.3 -4.98255 | overlap 1589421 AATGTTGGCGCTGTC GCCGAAGGT GAAA ACCTCGGGC TTTTTATCCTTCGGA TERM 2506 1591592 - 1591559 - G 70 -2.3 -4.7254 | opp_overlap 1591586, overlap 1591560 1591586 AGGGCTTATTAAAAA GGAGGCGTTGGTG TATTCCCG CACATACGCCTCA AAGTAGAGGCGTTTT TERM 2507 1591586 - 1591603 + g 86 -8.4 -4.59109 | opp_overlap 1591560 1591559 1591586 GTATTCCCGCACATA CGCCTC AAAGTA GAGGCG TTTTTCCAGAATGTA TERM 2508 1591665 - 1591682 + g 93 -9.1 -4.75308 | CTTCCGGAGCGCAGG GGCGCGT AAAG ATGCGCC TTTTTGGATGTTCGT Dole_1335 1592464 - 1591895 - | molybdopterin oxidoreductase Fe4S4 region Dole_1336 1593246 - 1592467 - | hypothetical protein TERM 2509 1592878 - 1592923 + g 79 -12.7 -3.23853 | gap 1, overlap 1592876 1592881 CATGTCAAAGGTCTT GTCTCCGGCCATCATCA-TCAG GTA CTGGGTGATGATGTCCGGGTAC TGTTCATTGAAAAAC TERM 2510 1592881 - 1592920 + g 73 -13 -2.80699 | gap 1, overlap 1592878 1592876 GTCAAAGGTCTTGTC TCCGGCCATCATCA-TCAG GTA CTGGGTGATGATGTCCGGG TACTGTTCATTGAAA TERM 2511 1593106 - 1593123 + g 82 -6.2 -4.77036 | ATCGGGCTTGATGGG GCTGGG CTTTTT CCCGGC TTTTTGCTGCTCCCA Dole_1337 1593855 - 1593271 - | CBS domain-containing protein TERM 2512 1593737 - 1593750 + g 76 -3.1 -5.00884 | GCCGAGTGGGGCATG CACTG ATCG TAGTG TTTTTTCAGCCGGAT TERM 2513 1593820 - 1593831 + g 70 -3.6 -4.57275 | opp_overlap 1593810 1593809, overlap 1593811 ATAATCCGTGATGGG GGCC ATCA GGTC TTTTACCTTTTTTTC Dole_1338 1595646 - 1593913 - | citrate transporter TERM 2514 1594218 - 1594202 - G 77 -7.9 -4.37092 | ATGTTGTCCACAAAA GCGGACA TGA TGGCCGC CACCCAGATGATCAG TERM 2515 1594519 - 1594507 - G 75 -9.1 -4.07455 | opp_overlap 1594506 CAGGAACACCACAAA GGCCA GGA TGGCC AGGCCGTATGTGAGC TERM 2516 1595301 - 1595276 - G 77 -8.3 -4.36914 | gap 1, opp_overlap 1595278 TCTTCGGTGATAAAA CAGTTC-CCCTC CCG GTGGGCGAACTG GTCTGCGGTGATCTG TERM 2517 1595952 - 1595934 - R 100 -9 -5.00884 | opp_overlap 1595934 ACCGGCGCGAAAAAA CTTTTACA TCA TGTAAAAG TTTTCGACATATTTG TERM 2518 1595934 - 1595952 + r 80 -9 -4.15543 | opp_overlap 1595934 ACCGGCGCGAAAAAA CTTTTACA TCA TGTAAAAG TTTTCGACATATTTG Dole_1339 1597009 - 1596023 - | PAS sensor protein TERM 2519 1596911 - 1596893 - G 78 -6.6 -4.60924 | overlap 1596894 GAAATGGGTGAAAAA GGTGCCGG TAC CCAGCACA TGATGATAATAGTAG Dole_1340 1597491 - 1597069 - | type IV pilus assembly PilZ TERM 2520 1597398 - 1597428 + g 79 -13.8 -3.13475 | opp_overlap 1597393 1597394 CCGCGCAGAAGCCGG GCCGGGGCAGCCGG TTG CCGGCCGAACCGGC TTCCGTATCCAGTTC TERM 2521 1597518 - 1597546 + r 71 -6.6 -4.21908 | gap 1, overlap 1597516 TCTGTTTTTTTGACG GCCCTGGCGGCGG TATT CCACCGC-AGGCC TTTTCACTGCTGGTG Dole_1341 1598455 - 1597550 - | response regulator receiver protein TERM 2522 1597607 - 1597586 - G 78 -2.9 -5.0538 | gap 1, overlap 1597588 GTCCATTTCAAAAAA CA-GGTCCTG CTC CCGGACCACG CCGGCCAGCTCTCCA TERM 2523 1597604 - 1597588 - G 74 -7.9 -4.15748 | overlap 1597586 CCATTTCAAAAAACA GGTCCTG CTC CCGGACC ACGCCGGCCAGCTCT TERM 2524 1598193 - 1598241 + g 70 -4.4 -4.45485 | gap 1, overlap 1598194 1598195 1598240 GCCTGCTGGGCCGAG GTGGGGCCGCCATGGCCGGTG AGCATGAC CACCGGCTG-GGCGGGCCGGA TTTTGTGAATCTCCT Dole_1342 1599019 - 1598501 - | hypothetical protein TERM 2525 1598912 - 1598896 - G 80 -5 -4.91511 | overlap 1598897 ACGTGACGAGAAAAA TCCCCG CCTGC CGGGGG CTGGCGCCGCTGTCC TERM 2526 1598965 - 1598945 - G 75 -5.3 -4.58685 | AAACTGTTCGAAAAA CTGTTTCGG CTG CCGGAGCAG TTGCCCGGAAATGGT Dole_1343 1601057 - 1599201 - | sodium/sulphate symporter TERM 2527 1599913 - 1599925 + g 72 -4.7 -4.69549 | overlap 1599909 TGAAGATGGTCCATG GCCGG TGC CAGGC TTTTGATTTTGGGTT TERM 2528 1600495 - 1600469 - G 78 -3.7 -4.93296 | gap 1 TTACCACCAGAAAAA TGCC-GATGCAG AAGG CCACACCCGGCA GGGGAATGCACTCGG TERM 2529 1600549 - 1600535 - G 72 -6.4 -4.30844 | AGCCCACCACGAAAA CCATCA TCA CGATGG CGGCCTTGATGTGCC Dole_1344 1602866 - 1601136 - | histidine kinase TERM 2530 1602764 - 1602748 - G 85 -10.1 -4.38154 | AGAGGGGCCAGAAAA GCGACGA CCA TCGCCGC CAGCACGCGTCTTCT TERM 2531 1602827 - 1602850 + g 81 -11.6 -3.92522 | CCATCGGTCGGGTTG CGCCCCCCGC GCCA GGGGGGGGTG TTTGTGCCGTTGCCA Dole_1345 1603290 - 1602871 - | response regulator receiver protein TERM 2532 1603464 - 1603482 + G 90 -3 -5.66684 | overlap 1603466 ATTTTGAAAGTTTTT GCGGACAG GCC CTGTCGAC TTTTTTTATAGATTG TERM 2533 1603538 - 1603526 - g 82 -10.5 -4.14243 | opp_overlap 1603531 CACGGTACCGGAAAA GGCGG TGG CCGCC GGCCATTGATGTACC Dole_1346 1603409 - 1603663 + | hypothetical protein TERM 2534 1603781 - 1603758 - f 78 -5.9 -4.7254 | opp_overlap 1603758 ACGGCTGATGAAAAA CGGGAAACC GGTTTT GGGCTCCCG GCCCGCTATCGCATA TERM 2535 1604219 - 1604194 - g 78 -11.3 -3.64822 | gap 1 ACCCTGCGATTTAAA CCAGC-TGATCA GCA TGATCAAGCTGG CCGGTGAGGAACGGA TERM 2536 1604317 - 1604338 + G 70 -12.3 -2.74691 | overlap 1604316 GGTCCAGAACGCCCG GCCCGGCAT TATT ATGCTGGGC GTTCTGCTGTTTCTG TERM 2537 1604535 - 1604520 - g 89 -6.1 -5.14563 | GGCTGTATGAAAAAA CCGTC ACCCCG GACGG CAAGACGGTCAACAC TERM 2538 1604650 - 1604680 + G 95 -4.1 -5.76949 | gap 2, overlap 1604633 1604632 1604636 CGCGGTGCCCATCGG CATCA-CG-GCCC TTCTGGT GGGCACGCTGATG TTTTTTTTCGGGATA TERM 2539 1605147 - 1605177 + G 73 -3.3 -4.81814 | gap 1, overlap 1605149 TGGGCCTGCCCTTTG TG-CCGGTGATGGC CCTG GTCATTGCCGGTTA TTTTCTTCTGGTAGT TERM 2540 1605149 - 1605174 + G 85 -9.7 -4.5028 | overlap 1605147 GGCCTGCCCTTTGTG CCGGTGATGGC CCTG GTCATTGCCGG TTATTTTCTTCTGGT TERM 2541 1605823 - 1605833 + G 90 -4.6 -5.45802 | GGACTTTTTTATCCA CGGC GGC GCTG TTTTTCTTTTAAGCA Dole_1347 1603838 - 1605904 + | response regulator receiver protein TERM 2542 1605968 - 1605957 - g 90 -4.4 -5.40072 | CCGGTGTGAAAAAAA TCAG TATT CTGA TCGTGGATGATGAGC Dole_1348 1605929 - 1606450 + | response regulator receiver protein TERM 2543 1607141 - 1607154 + G 85 -3.1 -5.47218 | gap 1, overlap 1607137 1607141 GTTATGTGCTTGACC GG-GAC GAG GTCTCC TTTTTTTCCATCAGA Dole_1349 1606468 - 1608132 + | histidine kinase TERM 2544 1608571 - 1608561 - g 83 -8.2 -4.57341 | opp_overlap 1608561 AAGCTGCTGGAAAAA GCCG AGG CGGC TTATGAGAAAAAAGT Dole_1350 1608219 - 1608662 + | response regulator receiver protein TERM 2545 1608691 - 1608720 + F 100 -13.5 -4.14392 | opp_overlap 1608693, overlap 1608693 GATGATGAAAACCAT AACCGGGGCGCGG TATG CCGTGTCCCGGTC TTTTACCCATTACCC TERM 2546 1608718 - 1608693 - f 85 -11.7 -3.70546 | opp_overlap 1608693 1608691 TGATGAAAACCATAA CCGGGGCGCGG TATG CCGTGTCCCGG TCTTTTACCCATTAC TERM 2547 1608693 - 1608718 + F 100 -16.1 -3.67 | opp_overlap 1608693, overlap 1608691 TGATGAAAACCATAA CCGGGGCGCGG TATG CCGTGTCCCGG TCTTTTACCCATTAC TERM 2548 1608802 - 1608784 - f 85 -3 -5.60993 | opp_overlap 1608784 1608785, overlap 1608785 GGCCGTACAAAAAAA TCGGAAAC CCT GTTGCCGG TTTATCTTTGAAGAC Dole_1351 1608953 - 1609378 + | response regulator receiver protein Dole_1352 1609449 - 1609868 + | response regulator receiver protein TERM 2549 1610033 - 1610054 + G 76 -12.3 -3.39908 | overlap 1610032 1610031 GCTGGGGTTGATGCT GCTGCCGAT CCTC ATCGGCGGC TATGTTTTCGCCGAC Dole_1353 1609905 - 1611188 + | hypothetical protein Dole_1354 1611193 - 1611882 + | hypothetical protein TERM 2550 1612008 - 1612026 + F 91 -6.6 -5.21709 | opp_overlap 1611995, overlap 1612010 GATGCGGCCAAGGCG GCTCGCCC GAA GGGTGAAC TTTTTTGATATAAAA TERM 2551 1612228 - 1612184 - f 100 -18.6 -3.16981 | opp_overlap 1612186 1612190, overlap 1612186 TAGAAGGAGAGGTAA GATGGTTCCGGAGCGCCGGA TTCGT TCCGGCGCTCCGGAACAGTT GATACCATGAAGCGA TERM 2552 1612186 - 1612226 + F 100 -23.4 -3.16564 | opp_overlap 1612184 1612186, overlap 1612190 GAAGGAGAGGTAAGA TGGTTCCGGAGCGCCGGA TTCGT TCCGGCGCTCCGGAACAG TTGATACCATGAAGC TERM 2553 1612225 - 1612186 - f 100 -23.1 -3.14013 | gap 1, opp_overlap 1612186 1612190, overlap 1612184 GAAGGAGAGGTAAGA TGGTTCCGGAGCGCCGGA TTCGT TCCGGCGCTCCGGAAC-A GTTGATACCATGAAG TERM 2554 1613771 - 1613797 + G 77 -12.2 -3.53224 | CTGCTCAACCGGGCC GCCGCCGTGCTC ACC GAGCACGGCACC TTTGCCGGCCACCTG TERM 2555 1614586 - 1614604 + G 87 -13.2 -3.87641 | overlap 1614592 CGCGGACAGCCAGCG CCGGATTC GGC GAATCCGG TTTATCGCCGATATT Dole_1355 1612235 - 1614847 + | pyruvate, water dikinase TERM 2556 1614852 - 1614822 - f 74 -11 -2.79321 | opp_overlap 1614819 1614847 1614848, overlap 1614820 1614819 1614817 GGGACATTAACAGCA CGGTCCTGGCCGGT TCC ACCGGATAGGGCCG CGGTTCGGTGGCCGT TERM 2557 1615545 - 1615565 + G 74 -11.1 -3.52963 | overlap 1615545 1615546 TCAGTGACGTGTTCA TGGGGCTTC GGG GAAGCCCCC ATTTTATTATTACCG TERM 2558 1615545 - 1615566 + G 100 -9.5 -4.90079 | gap 1, overlap 1615545 1615546 TCAGTGACGTGTTCA T-GGGGCTTC GGG GAAGCCCCCA TTTTATTATTACCGT TERM 2559 1615546 - 1615564 + G 80 -14.6 -2.71055 | overlap 1615545 1615545 CAGTGACGTGTTCAT GGGGCTTC GGG GAAGCCCC CATTTTATTATTACC TERM 2560 1616592 - 1616608 + G 72 -4.4 -4.64861 | gap 1, opp_overlap 1616577 CCGGCCCCGGCATTC CGG-AGG CCAA CCTGCCG TTTATTTTCAACCCC Dole_1356 1615010 - 1616785 + | histidine kinase Dole_1357 1616868 - 1617302 + | response regulator receiver protein Dole_1358 1617324 - 1617758 + | response regulator receiver protein TERM 2561 1618182 - 1618198 + G 86 -3 -5.55664 | gap 1, overlap 1618161 GCCCCTGGAGATTAC CGCC-AT CTGC ATCGGCG TTTTTTTAGTGATCG TERM 2562 1618573 - 1618599 + G 70 -4.2 -4.57837 | overlap 1618571 1618569 TCCACCCTGATCGGC GGGGGCCGCTGT ATG GTGTCGGCCGCC TTTTTAAAGGAGTAT Dole_1359 1617778 - 1619382 + | anion transporter Dole_1360 1619446 - 1620657 + | response regulator receiver sensor signal transduction histidine kinase TERM 2563 1620869 - 1620844 - gf 100 -11.1 -5.43487 | AAAGGAGATAAAAAA GCACCATCCCC TGGT GGAGGTGGTGC TGCTCACCGGGCACG Dole_1361 1620623 - 1621066 + | response regulator receiver protein Dole_1362 1621120 - 1621599 + | response regulator receiver protein TERM 2564 1621682 - 1621667 - g 79 -5.4 -4.85267 | ACAAACCACGAAAAA GCCAAT ATTT ACTGGC ACCAGGGTCAGATTC TERM 2565 1621855 - 1621878 + G 72 -4.4 -4.56597 | overlap 1621855 1621859 CGGTGACAACATACG CCACGGTCTC AACA GGGACCTGGG TTTTTCGCCGGAGGA Dole_1363 1621649 - 1622263 + | adenylyl-sulfate kinase Dole_1364 1623756 - 1622299 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 2566 1622596 - 1622575 - G 74 -13 -2.87132 | TCCGTCTGTCACAGA CGGCCCTG CCTGGT CAGGGCCG GCAATCACCTGGGAG Dole_1365 1625243 - 1623753 - | histidine kinase TERM 2567 1624092 - 1624130 + g 70 -3.9 -4.56597 | gap 3, overlap 1624095 AAACACCTCTTTGAT CAGGCCGGGATCGGCCTC CACGGA GATGCCG--CCCGGC-TG TTTTTCACGAACCAC TERM 2568 1624420 - 1624435 + g 86 -6 -5.00616 | overlap 1624421 ACCACCGATGCCAGG CGGCCC ACCA GGGCCA TTTTTTCCGAAGAAA TERM 2569 1625172 - 1625142 - G 81 -15.6 -2.62184 | overlap 1625144 CCGCTTGGCATACCA CATTGTGGTGGC TCCCATG GCCACCACAATG ACCATGAGCAGCACC TERM 2570 1625170 - 1625144 - G 70 -12.4 -2.85351 | overlap 1625142 GCTTGGCATACCACA TTGTGGTGGC TCCCATG GCCACCACAA TGACCATGAGCAGCA Dole_1366 1626138 - 1625296 - | protein serine/threonine phosphatase TERM 2571 1625641 - 1625659 + g 70 -4.4 -4.49756 | overlap 1625643 CATGTGTTTGAATTC CGGGCCCA GCT TGGCGCCG TTTTCCTGTTTGCCC Dole_1367 1628767 - 1626158 - | serine/threonine protein kinase with Chase2 sensor TERM 2572 1627752 - 1627764 + g 70 -4.7 -4.5442 | opp_overlap 1627753, overlap 1627753 ATTTTGTTGGTAAAG ACCCG CAG CGGGA TTTTGTCGTTGAGCA TERM 2573 1628225 - 1628210 - G 74 -2.5 -5.00616 | overlap 1628213 GGTGTCTTTAAAAAA GATGG GCAGCA CCACC CGGCCCGACCGGGTC Dole_1368 1628828 - 1629067 + | hypothetical protein TERM 2574 1630173 - 1630231 + G 100 -22.5 -3.53444 | overlap 1630144 1630160 1630158 GACCCGGTCCGACAC CGGCGGCGTTGTCCGGGT-GTTTCTGGCG GCC CGGCAGATGCTGCCCGG-CAGCGCCGCCG TTTCAGAGGGCCTGA Dole_1369 1629067 - 1630413 + | hypothetical protein Dole_1370 1631858 - 1630419 - | cation transporter TERM 2575 1631410 - 1631390 - G 77 -13.3 -2.90496 | overlap 1631387 CGCTGCGGTAAAGGA CCATGGAGG CGG CCCCCATGG AGGGTATCACCGCCA Dole_1371 1632619 - 1631855 - | histidine kinase Dole_1372 1633253 - 1632819 - | hypothetical protein TERM 2576 1633541 - 1633571 + H 83 -4.7 -5.24531 | overlap 1633567 TGTCCAGGTGCTGCT GCAGGC-GCTGATCA AGA TGA-CGGCAGCCGGC TTTTTTGTGGCCGGT TERM 2577 1633876 - 1633888 + G 80 -2.6 -5.24129 | overlap 1633873 CAGGGAATCGACCCG GCTG CAGAC CGGC TTTTTTGTGACCCGG TERM 2578 1634382 - 1634366 - g 74 -7.9 -4.15565 | opp_overlap 1634373 GCCATGACCGGAAAA GGGGTGG CAG CCACACC GGCGGTCTCTCCCGA TERM 2579 1635367 - 1635385 + G 71 -10.4 -3.56092 | GGCGCTGCTGGAGAC GCTGTTTT TAC AAAACAGC TTTCAACCCTGCTAC Dole_1373 1633634 - 1635541 + | hypothetical protein TERM 2580 1635561 - 1635601 + T 78 -5.5 -4.84359 | opp_overlap 1635548 1635546, overlap 1635562 GACCGTCTCCCTGTT G-GCAGGGAGTTCAGGCAT CCTGA ATGCC-GAGTTCCCGGCTC TTTTTCTCCAGGTCG TERM 2581 1635562 - 1635599 + T 78 -9.2 -4.04397 | gap 1, opp_overlap 1635548 1635546, overlap 1635561 ACCGTCTCCCTGTTG GCAGGGAGTTCAGGCAT CCTGA ATGCC-GAGTTCCCGGC TCTTTTTCTCCAGGT Dole_1374 1637403 - 1635571 - | ABC transporter-related protein TERM 2582 1635719 - 1635765 + g 82 -6.5 -4.85195 | gap 1, overlap 1635724 CGGTCCCCGGTATGG GAGGCGGCCACCATATCGGCGT TCAG ACGTCCA-ATGGCGGCCTCGTC TTTTTCAATTGTTTT TERM 2583 1636345 - 1636361 + g 75 -4.3 -4.83169 | GTCCATCTTGTTGGT CTGGGCA AAA TACCCGG TTTTTGTGGACGGGT TERM 2584 1636457 - 1636478 + g 78 -6.5 -4.63218 | CCCCGTCCGTTTTTG CCGATCACG CAGA TGCGATCGG TTTTATTGACGGCAA TERM 2585 1637063 - 1637099 + g 78 -3.8 -5.00616 | opp_overlap 1637048, overlap 1637059 TCGGCCGGATGCCGG TCCATGTC-GGTTTTGGA AAA TCCCAGGCCGGACA-GGA TTTTTTCGGCCCGCC TERM 2586 1637638 - 1637605 - g 78 -3.8 -4.98255 | gap 2 TTCGAACGACAAAAA GACGGCC-GGCAC-CA CAGT TGAGAGCCTGACCGCC TATTTTTTGAAGCTT TERM 2587 1637815 - 1637832 + G 83 -4.7 -5.04987 | TATCGCCGAAGACAC CGGCAGC AAGA GCAGCTG TTTTTTCGCGATCTT TERM 2588 1639433 - 1639448 + G 84 -4 -5.24129 | gap 1, overlap 1639433 1639435 GTTCTTTCAGTACTT G-AGGTG CTG CACCTGC TTTTTTATCGGGCCG Dole_1375 1637582 - 1639546 + | serine/threonine protein kinase Dole_1376 1639543 - 1640331 + | hypothetical protein Dole_1377 1641468 - 1640362 - | diguanylate cyclase TERM 2589 1640426 - 1640412 - G 72 -8.5 -3.85698 | opp_overlap 1640411 GCTTGCCGTCATAAA GGGCC TGGTC GGCCC GCTTGATGCATTTTT TERM 2590 1641369 - 1641357 - G 76 -3.3 -4.93296 | overlap 1641359 CCAGCACCACAAAAA CGGCT GAC ACCCG CTTGCGTCGCTCGTC Dole_1378 1641969 - 1641604 - | hypothetical protein TERM 2591 1642070 - 1642033 - R 93 -7.7 -5.252 | gap 1, opp_overlap 1642048, overlap 1642037 GATCCTGACAAAAAA CGC-AGCAGCCACCAGCA CGA TGCCGATGACCACCAGCG CCAGCGTGTTTGAGA Dole_1379 1642218 - 1642015 - | hypothetical protein Dole_1380 1642938 - 1642234 - | hypothetical protein Dole_1381 1643462 - 1643022 - | membrane protein-like protein Dole_1382 1644321 - 1643548 - | hypothetical protein TERM 2592 1643739 - 1643725 - G 70 -5 -4.52703 | TAAAGGATCAGAAAA TTCAAG TGA CTCGAA AACGGCAGCTTTCTC Dole_1383 1644838 - 1644338 - | hypothetical protein Dole_1384 1645605 - 1646957 + | transposase IS4 family protein TERM 2593 1647177 - 1647218 + T 79 -11.6 -3.16564 | gap 1, opp_overlap 1647175 1647158 1647185, overlap 1647158 1647188 CTCCGCCTAACGAGC CGGCATAAGGCGCGGCGGC TTTTT GCCGTCGT-CTTAATGCCG TTGCTGGGCTACAGA Dole_1385 1647521 - 1647210 - | XRE family plasmid maintenance system antidote protein Dole_1386 1647812 - 1647534 - | plasmid maintenance system killer TERM 2594 1647941 - 1647998 + r 100 -14.1 -4.48741 | gap 1, overlap 1647942 1647995 1647996 GTGACGGGAAAGGGT CCGCTCCAACGTCTTGTTCGCTGAGCGC GCA GCGGGAAGCG-ACAAGGCGGTGGAGCGA TTTTATCGTCGCTTA TERM 2595 1647942 - 1647997 + r 100 -17.6 -3.28522 | gap 1, overlap 1647941 1647995 1647996 TGACGGGAAAGGGTC CGCTCCAACGTCTTGTTCGCTGAGCGC GCA GCGGGAAGCG-ACAAGGCGGTGGAGCG ATTTTATCGTCGCTT TERM 2596 1648123 - 1648080 - R 88 -14 -2.71681 | gap 1, opp_overlap 1648087 1648091, overlap 1648091 GAACGTCTGCAATGA TGCG-CAAGAAATAGCCGTGC GAA GCGCGGCTATTTCTTATCGCT GTCGATTGCTTGGTT TERM 2597 1648087 - 1648115 + r 100 -18.3 -3.40071 | opp_overlap 1648080 1648091, overlap 1648091 TGCAATGATGCGCAA GAAATAGCCGTGC GAA GCGCGGCTATTTC TTATCGCTGTCGATT TERM 2598 1648091 - 1648111 + r 100 -13.3 -4.34488 | opp_overlap 1648080 1648091, overlap 1648087 ATGATGCGCAAGAAA TAGCCGTGC GAA GCGCGGCTA TTTCTTATCGCTGTC TERM 2599 1648111 - 1648091 - R 87 -11.1 -4.1711 | opp_overlap 1648091 1648087, overlap 1648080 ATGATGCGCAAGAAA TAGCCGTGC GAA GCGCGGCTA TTTCTTATCGCTGTC Dole_1387 1648666 - 1648109 - | hypothetical protein TERM 2600 1648690 - 1648747 + r 80 -8.3 -4.4767 | gap 1, opp_overlap 1648735 1648736, overlap 1648691 GTGACGGGAAAGGGT CCGCTCCAACGTCTTGTTCTCTGAGCGC GCA GCGGGAAGCG-ACAAGGCGGTGGAGCGA TTTTATCGTCGCTCA TERM 2601 1648691 - 1648746 + r 82 -11.8 -3.2812 | gap 1, opp_overlap 1648735 1648736, overlap 1648690 TGACGGGAAAGGGTC CGCTCCAACGTCTTGTTCTCTGAGCGC GCA GCGGGAAGCG-ACAAGGCGGTGGAGCG ATTTTATCGTCGCTC TERM 2602 1648771 - 1648818 + r 91 -13.4 -3.59979 | gap 1, opp_overlap 1648792 1648796 1648797, overlap 1648772 1648797 1648798 TCGCTCAACTGCGGC AATTCGCCGAGGGCGCA-AGGAC GAA GTCCGCTGCGCGCTCGGCGAACG TTTGGCATAAGGCGC TERM 2603 1648772 - 1648817 + r 100 -16.9 -2.75844 | gap 1, opp_overlap 1648792 1648796 1648797, overlap 1648771 1648797 1648798 CGCTCAACTGCGGCA ATTCGCCGAGGGCGCA-AGGAC GAA GTCCGCTGCGCGCTCGGCGAAC GTTTGGCATAAGGCG TERM 2604 1648821 - 1648863 + r 95 -14.1 -3.63341 | opp_overlap 1648797 1648829 1648830, overlap 1648798 1648797 1648822 1648848 CGCTCGGCGAACGTT TGGCATAAGGCGCGGCGGC TTTTT GCCGTCGCTCTTAATGCCG TTGTTAGCGACTATT TERM 2605 1648822 - 1648862 + r 95 -15.4 -2.77522 | opp_overlap 1648797 1648829 1648830, overlap 1648798 1648797 1648821 1648848 GCTCGGCGAACGTTT GGCATAAGGCGCGGCGGC TTTTT GCCGTCGCTCTTAATGCC GTTGTTAGCGACTAT Dole_1388 1649947 - 1648874 - | hypothetical protein TERM 2606 1649420 - 1649406 - G 85 -2.7 -5.52384 | overlap 1649407 1649408 TTCTGAGCAAAAAAA GGTGC CTTAT GCCCC ATGAGCATCAAGCCA TERM 2607 1650129 - 1650186 + r 100 -14.1 -4.4767 | gap 1, opp_overlap 1650174 1650175, overlap 1650130 GTGACGGGAAAGGGT CCGCTCCAACGTCTTGTTCGCTGAGCGC GTA GCGGGAAGCG-ACAAGGCGGTGGAGCGA TTTTATCGTCGCTCA TERM 2608 1650130 - 1650185 + r 100 -17.6 -3.2812 | gap 1, opp_overlap 1650174 1650175, overlap 1650129 TGACGGGAAAGGGTC CGCTCCAACGTCTTGTTCGCTGAGCGC GTA GCGGGAAGCG-ACAAGGCGGTGGAGCG ATTTTATCGTCGCTC Dole_1389 1650608 - 1650309 - | hypothetical protein TERM 2609 1650788 - 1650845 + r 100 -14.1 -4.4767 | gap 1, opp_overlap 1650833 1650834, overlap 1650789 GTGACGGGAAAGGGT CCGCTCCAACGTCTTGTTCGCTGAGCGC GCA GCGGGAAGCG-ACAAGGCGGTGGAGCGA TTTTATCGTCGCTCA TERM 2610 1650789 - 1650844 + r 100 -17.6 -3.2812 | gap 1, opp_overlap 1650833 1650834, overlap 1650788 TGACGGGAAAGGGTC CGCTCCAACGTCTTGTTCGCTGAGCGC GCA GCGGGAAGCG-ACAAGGCGGTGGAGCG ATTTTATCGTCGCTC Dole_1390 1651392 - 1651177 - | hypothetical protein TERM 2611 1651847 - 1651904 + r 100 -14.1 -4.4767 | gap 1, opp_overlap 1651892 1651893, overlap 1651848 GTGACGGGAAAGGGT CCGCTCCAACGTCTTGTTCGCTGAGCGC GCA GCGGGAAGCG-ACAAGGCGGTGGAGCGA TTTTATCGTCGCTCA TERM 2612 1651848 - 1651903 + r 100 -17.6 -3.2812 | gap 1, opp_overlap 1651892 1651893, overlap 1651847 TGACGGGAAAGGGTC CGCTCCAACGTCTTGTTCGCTGAGCGC GCA GCGGGAAGCG-ACAAGGCGGTGGAGCG ATTTTATCGTCGCTC TERM 2613 1652896 - 1652883 - R 86 -8.1 -4.91109 | GGTCGAGCATAAAAA CGCGA AAAT TCGCG AACTGCAGATAAAAA Dole_1391 1653916 - 1653023 - | thiamine pyrophosphate binding domain-containing protein TERM 2614 1654107 - 1654125 + r 100 -16 -3.05384 | overlap 1654111 CTTGGCCTCTGGCTT GCCACGCC TGC GGCGTGGC TTCCCTCGCGCAAAC Dole_1392 1655505 - 1654315 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 2615 1654771 - 1654728 - G 79 -7.2 -4.58395 | gap 1, opp_overlap 1654734 1654751 GGTAGCCTTCAAAAA GGGGATGGCCCCCCCGG-CCG AAC CGGTCCAGGTAGGCCTTGTCC GTCTCTTCCACCACG TERM 2616 1655568 - 1655592 + r 70 -10 -3.16742 | overlap 1655571 CAAATCCCTTGTCAC TGCGGCGTAC AATCA GTACGCCTCA TTCCTCGGGATTCGC TERM 2617 1655571 - 1655589 + r 71 -10.3 -2.78395 | overlap 1655568 ATCCCTTGTCACTGC GGCGTAC AATCA GTACGCC TCATTCCTCGGGATT Dole_1393 1656085 - 1655786 - | pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit Dole_1394 1656650 - 1656090 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit Dole_1395 1658520 - 1657003 - | glycerol kinase TERM 2618 1657093 - 1657105 + g 70 -4.7 -4.42238 | overlap 1657069 GGCCGCCATTTCCGG CTGCC ATT GGCCG TTTTCCTTCCAGTGG TERM 2619 1657369 - 1657351 - G 71 -10.2 -3.59979 | opp_overlap 1657366 CTCGTTGACCTGAAA GGCCGTGG ACT CCAGGGCC GCCCGGGCGATGTGG TERM 2620 1657487 - 1657502 + g 75 -9 -4.09511 | opp_overlap 1657480 1657482 ACAAAATAGACGCCG CCGTTG TCGG CAACGG TTTTGGCCAGGTCTT TERM 2621 1657806 - 1657794 - G 71 -10.5 -3.53444 | opp_overlap 1657803 CCAGGTCCCCGGAAA CCGGG GTG CCCGG TGCTAGGCCCCAGTT TERM 2622 1658124 - 1658135 + g 91 -7.2 -5.26875 | opp_overlap 1658119, overlap 1658118 AAAAATAGGAGGCTG CCGG CAGC CCGG TTTTTTCCTTAAACA Dole_1396 1659353 - 1658517 - | dihydrodipicolinate reductase TERM 2623 1659538 - 1659501 - H 74 -10.7 -2.95116 | opp_overlap 1659500 1659505, overlap 1659498 1659505 CGAGGAGTGAAACGA CGAAGCAATCTCCTTCA CATA TGGACAAGATTGCTTCG CTTCGCTCGCAATGA Dole_1397 1659808 - 1660833 + | hypothetical protein TERM 2624 1661120 - 1661135 + G 93 -9 -4.83243 | CCTGCACCGCAGCCA GACCGA CCCT TCGGTC TTTCTTTTCTATGAG Dole_1398 1660992 - 1661282 + | antibiotic biosynthesis monooxygenase TERM 2625 1661529 - 1661518 - g 79 -7.2 -4.59773 | CCTGACCCGTAAAAA GGCC CAAT GGCC CGATTCCGTGCCGGC Dole_1399 1661303 - 1662367 + | Zn-dependent hydrolase of the beta-lactamase fold-like protein TERM 2626 1662439 - 1662455 + G 80 -9.4 -4.18494 | GGCTGCGCGGCCTTG TCCGGC CTGCT GCCGGA TTTTGCCTGCCCCTG TERM 2627 1662764 - 1662774 + G 83 -8.2 -4.57073 | overlap 1662742 GCAACGACGCCAATG CCCG GAC CGGG TTTTTCCGCACCATC TERM 2628 1663197 - 1663175 - g 71 -12.6 -2.57013 | overlap 1663171 GTGCAATGGAATCCA GGACCCCGGC GAT GCCGGTGCCC GATTACGGCCGGGTG TERM 2629 1664197 - 1664214 + G 78 -8.3 -4.55798 | opp_overlap 1664175, overlap 1664199 CTGCGCCGGGCACTG GCCGGCG CCAC CGCCGAC TTTTCCTTTGCCGTG TERM 2630 1664401 - 1664424 + G 70 -3.8 -4.56775 | gap 1 CACACCATTGACGGC GCCATGGCCCG CTT CGGG-TATCGC TTTTTCGCCGGGGGT TERM 2631 1664746 - 1664715 - g 78 -8.6 -4.18494 | gap 1, overlap 1664716 CACGGCCATTGAAAA GGCCCG-GGTCCAGG TGG CCTGGCCCACGGACG ACTGCTGGAATATTT TERM 2632 1664745 - 1664716 - g 73 -12.1 -3.10775 | gap 1, overlap 1664715 ACGGCCATTGAAAAG GCCCG-GGTCCAGG TGG CCTGGCCCACGGAC GACTGCTGGAATATT Dole_1400 1662364 - 1665240 + | peptidase M16 domain-containing protein Dole_1401 1665411 - 1666589 + | cystathionine gamma-synthase Dole_1402 1666636 - 1668213 + | beta-lactamase domain-containing protein TERM 2633 1668437 - 1668408 - g 95 -11.3 -4.81644 | opp_overlap 1668429 1668430 TAAATAAAATCAAAA CCAGTGCGCCCGA ATCT TCGGCCGCGCCGG CCTCCCGGCCGGATG TERM 2634 1669431 - 1669447 + G 75 -9.3 -3.86194 | overlap 1669432 1669443 TGATTCACGGCGAGG TGGCCGG ATA CCGGCCC TTTGTCAGCGCCATT TERM 2635 1669432 - 1669446 + G 74 -12.8 -2.91395 | overlap 1669431 1669443 GATTCACGGCGAGGT GGCCGG ATA CCGGCC CTTTGTCAGCGCCAT Dole_1403 1668353 - 1670149 + | hypothetical protein Dole_1404 1670162 - 1670707 + | hypothetical protein Dole_1405 1670709 - 1671233 + | hypothetical protein Dole_1406 1671263 - 1672879 + | type II and III secretion system protein TERM 2636 1674100 - 1674113 + G 75 -9.5 -3.90744 | opp_overlap 1674091 1674092 1674077, overlap 1674082 GGAAAAGCCGGCAGA CGGCG TGCC CGCCG TTATTTCGGCCACGG Dole_1407 1672883 - 1674175 + | type II secretory pathway ATPase ExeA TERM 2637 1674284 - 1674246 - g 77 -2.4 -5.03314 | gap 1, opp_overlap 1674257, overlap 1674235 CGCACGCGGAAAAAA CTCGGCGAAAT-GCTGG TGGACG CCGGCTATCTGACCGAG GAGCGACTGACCGGC TERM 2638 1675461 - 1675438 - g 77 -12.4 -3.57144 | opp_overlap 1675454 TTCGCGACGGCGAAA CCGCCCAGGT GGCC ACCCAGGCGG CCCTCACCGGCCACA TERM 2639 1675540 - 1675550 + G 76 -4.6 -4.82667 | overlap 1675512 GGTTTATCGACATGG GGGT GGA GCCC TTTTTGGTCTCGTCG Dole_1408 1674201 - 1675934 + | type II secretion system protein E TERM 2640 1676975 - 1676933 - g 72 -9.2 -3.63744 | overlap 1676931 GCGCCGGGCAAAATA TTTTCCCCCCATGGTGATCA ACA TGATCGCCATTGGAGAAGAA TCCGGCAACCTGGAG Dole_1409 1675941 - 1677158 + | type II secretion system protein TERM 2641 1677234 - 1677216 - f 73 -4.6 -4.74103 | opp_overlap 1677216 1677214 TTGTTAATTTAAAAA TATCTGTT ATA ATCAGATA TCTTTGTAAAACAAA Dole_1410 1677292 - 1677705 + | hypothetical protein TERM 2642 1677744 - 1677782 + F 100 -19.7 -5.33026 | opp_overlap 1677763 TTTCTGAACTTTCCT GGCGATGGCGTTGAACC TAGGC GGTTTGGCGCCATCGCC TTTTTGTTTGCCTTG TERM 2643 1678095 - 1678085 - g 71 -6.8 -4.15565 | opp_overlap 1678084 TGTACTATGGGAAAA GACG GCG CGTC CTATGTTCACCGGCC TERM 2644 1678526 - 1678552 + G 83 -5.8 -5.00616 | overlap 1678519 GCGGCCCTGTTTCCG GCAGCTCTCC TGCTGGT GGAGGCCTGC TTTTTTGACGCGGCC TERM 2645 1679032 - 1679065 + G 78 -8.9 -4.25389 | gap 1, overlap 1679016 GGCCCTGGGCCTTAA CCGGCTTC-TGGCC ATTTATC GGCAACGAAGCCGG TTTATCTATTATACT TERM 2646 1679551 - 1679570 + G 78 -4.2 -4.98531 | gap 1, opp_overlap 1679543, overlap 1679548 TGAACCAGCCGTCGG GCCGGCCAC GAA GTC-CCGGC TTTTTGCTTTGCGGG TERM 2647 1679811 - 1679797 - g 75 -8.5 -4.08216 | opp_overlap 1679789 TTATCTTGCCGAAAA CCGGC TTCTG GCCGG CGATACGAAAAGTGC Dole_1411 1677887 - 1680013 + | TPR repeat-containing protein TERM 2648 1680525 - 1680542 + G 80 -4.7 -5.00616 | overlap 1680526 TTCCGAACACTGGCG CCGGGGG TTGA CCCGTGG TTTTTTGCCGCCGGC TERM 2649 1680726 - 1680769 + G 80 -2.2 -5.19879 | gap 1, overlap 1680726 1680744 AAGGGATGATGTGGA CCGG-GCCTACTGGGCAGGGG TTT CCACGTCCCAGTGGATATCGG TTTTTCTGTTTGCCG Dole_1412 1680001 - 1680828 + | prolipoprotein diacylglyceryl transferase TERM 2650 1681205 - 1681225 + G 70 -2.5 -4.8048 | opp_overlap 1681205 1681204 1681207 TACCGGTGCAAAGAC GATCCAG ACCTGAC CCGGATC TTTTTGCTCTCCCAC TERM 2651 1681443 - 1681431 - g 72 -4.8 -4.56775 | overlap 1681432 ACCTGGTGTCAAAAA GTCC GGTGT GGAC GGGATGGGCAAAACG Dole_1413 1680986 - 1681624 + | hypothetical protein Dole_1414 1685492 - 1681614 - | hypothetical protein TERM 2652 1682190 - 1682178 - G 72 -4.7 -4.62069 | overlap 1682179 GTTGGATCCGAAAAA GGCGG AGA CCGCG TTGACCCGTTCTACA TERM 2653 1683923 - 1683909 - G 74 -2.7 -5.00616 | GGCCGCTGGAAAAAA GCCGG CAAAT CCGTC ATCCTTCAGACTGAT TERM 2654 1684345 - 1684315 - G 79 -7.4 -4.70659 | opp_overlap 1684340 1684342, overlap 1684290 1684342 GTGGATACGGAAAAA GCGCCGTCGCCTTC GGT GGAGGAGAGAGCGC TGATAAAATTGGCGC Dole_1415 1685929 - 1685495 - | hypothetical protein Dole_1416 1686543 - 1685926 - | hypothetical protein Dole_1417 1686680 - 1688746 + | hypothetical protein Dole_1418 1688820 - 1689593 + | electron transfer flavoprotein alpha/beta-subunit TERM 2655 1690099 - 1690085 - g 71 -12.8 -2.59267 | overlap 1690084 GCGAACGAGAGCAAG GGCGCC GGC GGCGCC GTGACGGACAAAACC TERM 2656 1690125 - 1690113 - g 70 -4.7 -4.42386 | overlap 1690114 CCGTGACGGACAAAA CCGCC GAT GCCGG TGACGTGACCGCCAA Dole_1419 1689593 - 1690555 + | electron transfer flavoprotein alpha subunit TERM 2657 1690618 - 1690581 - T 100 -13.3 -4.26903 | opp_overlap 1690586, overlap 1690586 CGTACGGCAGTAAAA TTTAAGCGGCGGCGGGG GCAA CCCCACCGCCGCTTTTG TTTGTGTGGGGCAGG TERM 2658 1690613 - 1690586 - T 100 -22 -3.39521 | opp_overlap 1690586, overlap 1690581 GGCAGTAAAATTTAA GCGGCGGCGGGG GCAA CCCCACCGCCGC TTTTGTTTGTGTGGG TERM 2659 1690586 - 1690613 + T 100 -19.8 -5.05113 | opp_overlap 1690586 1690581 GGCAGTAAAATTTAA GCGGCGGCGGGG GCAA CCCCACCGCCGC TTTTGTTTGTGTGGG Dole_1420 1692277 - 1690646 - | putative PAS/PAC sensor protein TERM 2660 1690759 - 1690727 - G 70 -4.2 -4.59773 | gap 1, overlap 1690751 TTCGATGGCGAAAAA GGCATCCACGAT-AT CGGG ATCAAAGTGGATGCC CCGGTCGTTTAAAAG Dole_1421 1693888 - 1692281 - | putative PAS/PAC sensor protein TERM 2661 1694275 - 1694265 - g 76 -4.6 -4.82901 | GGGTGTGGAGAAAAA CGCC ACT GACG AGGAGATTAAAAAGG TERM 2662 1694525 - 1694568 + G 84 -7.2 -4.87133 | overlap 1694553 TCGGTTTTGGCGGGG GCGGTGGCTTTTTCTCCGGC GGCG GCCGGGGAGGTGGTGCCCGC TTTTCTTTCGACGGT TERM 2663 1695017 - 1695002 - g 81 -9 -4.37886 | GCACCCGGCACAAAA GCAAGC TGCG GCTTGC CGGGCAGGGGATTCC Dole_1422 1694221 - 1695150 + | chaperone DnaJ domain-containing protein TERM 2664 1695375 - 1695388 + G 90 -3.1 -5.75342 | overlap 1695372 TGCCGTCTGTGTGCT CAAGG GGGC CTTTG TTTTTTTTGCCGACC TERM 2665 1695561 - 1695576 + G 82 -6 -4.77759 | overlap 1695563 AGACATTGTGGATAC CGGCGC CACA GCGCGG TTTTTGCTGGATTAT Dole_1423 1695253 - 1695786 + | hypoxanthine phosphoribosyltransferase TERM 2666 1697623 - 1697638 + G 71 -8.2 -4.0044 | CGCCAATATTCGGGC CGGGGC AACA GTCCCG TTTATGATCGTCATT Dole_1424 1695812 - 1697719 + | Zinc finger-domain-containing protein TERM 2667 1697802 - 1697813 + F 91 -7.2 -5.26918 | overlap 1697800 GGTGGGCGGCCGCCG GCGG GATG CCGC TTTTTTGTACCATGT TERM 2668 1697919 - 1697949 + F 100 -17 -5.45802 | CACTTGATCACGCAG GGCTCTTTTGGACG GGA CGTCAAAAAGAGCC TTTTTGTTTTACAGG Dole_1425 1697974 - 1698357 + | hypothetical protein TERM 2669 1698997 - 1699018 + G 95 -6.5 -5.63103 | opp_overlap 1698997 1698998 1699000, overlap 1698998 TGCCGGTGGTGGAAA TCATTCCCG GTGA CGGGTATGG TTTTTTTGATTACGA TERM 2670 1698998 - 1699017 + G 71 -7.8 -3.96777 | opp_overlap 1698998 1698997 1699000, overlap 1698997 GCCGGTGGTGGAAAT CATTCCCG GTGA CGGGTATG GTTTTTTTGATTACG Dole_1426 1698381 - 1699322 + | D-alanine--D-alanine ligase TERM 2671 1699969 - 1699979 + GF 79 -6.8 -4.65916 | opp_overlap 1699957 GAACGTCTCGAGGGA GAGG AGG CCTC TTTTATTGCGCTCAC TERM 2672 1701029 - 1701047 + GF 71 -8.8 -3.74747 | opp_overlap 1701043 TGGCCGTGGGCAAGG CCGGCG CAAAAAA CGCCGG TTTCCTGGCCATTCA TERM 2673 1701160 - 1701144 - g 87 -4.3 -5.42259 | CGATGTTGAAAAAAA GGCCCAA CAG CTTGGCC GATTACAGGCATAAC Dole_1427 1699399 - 1701174 + | phosphoribosylamine--glycine ligase Dole_1428 1701131 - 1701808 + | Sua5/YciO/YrdC/YwlC family protein TERM 2674 1701962 - 1701989 + F 75 -5.5 -4.72272 | opp_overlap 1701962 CACCAGATAACATAA GGGGGTGGC GCCTGTTTCG GCCAGCCCC TTTTTAATGAAGAGG TERM 2675 1702066 - 1702078 + G 75 -10.5 -3.70811 | ATCTGGTCCGTGCCC CGGCC AAG GGCCG TTTCCCCTTCTGTCA TERM 2676 1702769 - 1702780 + G 79 -7.2 -4.56597 | CCTGGAAGAAATGGT GGCG CATT CGCC TTTTTACAAGAACCG Dole_1429 1701996 - 1702916 + | beta-lactamase domain-containing protein TERM 2677 1702905 - 1702924 + F 85 -7.8 -4.77165 | gap 1, opp_overlap 1702889, overlap 1702892 CACGGCCGGTTTATG CCGG-CGGC GTA GTCGTCCGG TTTTGTTCTCCCGGC TERM 2678 1703589 - 1703605 + G 78 -4.3 -4.91109 | overlap 1703562 AGTGCTCTCCCTGGC GGCGTGT CTG GCAAGCC TTTTTCTGCTGCCCC TERM 2679 1703686 - 1703704 + G 79 -7.4 -4.61199 | TCACTGCTGCTGACG GACCGTTT TTT ATACGGTC TTTTCTGTCTGCGGT Dole_1430 1703062 - 1704294 + | major facilitator transporter TERM 2680 1705300 - 1705347 + G 86 -5.5 -5.08831 | gap 2, overlap 1705334 TTGCCGTACCCCTGG GGGTACAGGCCAGGGGACGGAAG ACCT CCTCCGGCAT-TGGCCTG-GCCC TTGTTTTTTTTCTTC TERM 2681 1705334 - 1705350 + G 100 -2.1 -6.25741 | overlap 1705300 GAAGACCTCCTCCGG CATTGGC CTG GCCCTTG TTTTTTTTCTTCTTT Dole_1431 1704393 - 1705568 + | permease YjgP/YjgQ family protein TERM 2682 1705641 - 1705656 + G 85 -3.2 -5.40474 | overlap 1705623 1705650 1705651 CCGTGGTGATCGTCA TCTACG TGGC CGTCGA TTTTTTTGAAAAGAT TERM 2683 1705650 - 1705677 + G 77 -7.8 -4.36914 | overlap 1705623 1705641 1705651 TCGTCATCTACGTGG CCGTCGATTTTT TTGA AAAGATCGACGA TTTTCTCGGGGCGGG TERM 2684 1705651 - 1705676 + G 71 -11.3 -3.21934 | overlap 1705623 1705641 1705650 CGTCATCTACGTGGC CGTCGATTTTT TTGA AAAGATCGACG ATTTTCTCGGGGCGG TERM 2685 1705705 - 1705715 + G 95 -2.4 -6.10295 | GGGGGTACCGCTTTC CCGC ATG GCTG TTTTTTTTCTGTTCA TERM 2686 1706551 - 1706569 + G 73 -12.4 -3.14564 | CATCTCCCTGGGATA TGGCGGCA TGC TGCCGCCG TTGATCGCGGCATGG Dole_1432 1705565 - 1706644 + | permease YjgP/YjgQ family protein TERM 2687 1707989 - 1707956 - g 100 -13.8 -4.8667 | opp_overlap 1707955 1707954, overlap 1707945 TATAGCGGAGAAAAA CCCGCCGCCAGCCA GACCTG TTACCGGCGGCGGG ACTCTTTTAATGCCG TERM 2688 1708009 - 1708060 + G 100 -15.3 -3.90112 | gap 2 TTTTAATGCCGCTTT CCTTTC-TGTAC-GGCGGAGCCGCG CGCT TGCGGCGCGGCCTGTACACGAAAGG TTTCATTCGACCCCG TERM 2689 1708554 - 1708593 + G 89 -15.7 -3.22938 | overlap 1708552 1708555 GCGTTTGTTTTTACC CGGTCGGATCCGGCTGC TGATTT GCGGCCGGATTCGGCCA TCTTACCTTATTTGA TERM 2690 1708555 - 1708592 + G 95 -19.2 -2.5304 | overlap 1708554 1708552 CGTTTGTTTTTACCC GGTCGGATCCGGCTGC TGATTT GCGGCCGGATTCGGCC ATCTTACCTTATTTG TERM 2691 1708786 - 1708811 + G 87 -6.8 -5.00616 | gap 1, opp_overlap 1708788 AAAGCGTTCGGCAGA CAGGCG-CCCG GGTGA CGGGCCACCTG TTTTTTCGGGACCAC Dole_1433 1706664 - 1709042 + | tetraacyldisaccharide 4'-kinase Dole_1434 1709194 - 1710000 + | hypothetical protein TERM 2692 1710087 - 1710076 - f 72 -5.8 -4.32857 | GCCGGGAAACATAAA CTGC TGGA GCAG AAAGGGGTAACAACT TERM 2693 1710235 - 1710281 + G 84 -7 -4.81551 | opp_overlap 1710236, overlap 1710236 CAACAGCGGAGAAAA AGCGGTGTTTCGGCGGATGCAG AAG CTGTTACCGCCGCCGTACCGCG TTTTTGATGTGGGTG TERM 2694 1710236 - 1710280 + G 71 -10.5 -3.48208 | opp_overlap 1710236, overlap 1710235 AACAGCGGAGAAAAA GCGGTGTTTCGGCGGATGCAG AAG CTGTTACCGCCGCCGTACCGC GTTTTTGATGTGGGT TERM 2695 1710280 - 1710236 - g 78 -3.9 -4.87273 | opp_overlap 1710235 1710236 AACAGCGGAGAAAAA GCGGTGTTTCGGCGGATGCAG AAG CTGTTACCGCCGCCGTACCGC GTTTTTGATGTGGGT Dole_1435 1710104 - 1710907 + | FkbM family methyltransferase Dole_1436 1712177 - 1710963 - | O-antigen polymerase TERM 2696 1711205 - 1711255 + g 80 -4.6 -4.98531 | opp_overlap 1711209 1711211, overlap 1711207 1711210 1711211 AACCCACGAATCCCA GCAAGACCATCACCTCCAGGTATG CAT TATGCGGGGAGGTGATGGCTATTC TTTTTAGTTTGAGAA TERM 2697 1711207 - 1711252 + g 79 -6.9 -4.58698 | gap 1, opp_overlap 1711209 1711211, overlap 1711205 1711210 1711211 CCCACGAATCCCAGC AAGACCATCACCTCCAGGTATG CAT TATGCGGGGAGGTGATGG-CTA TTCTTTTTAGTTTGA TERM 2698 1711210 - 1711250 + g 75 -9.7 -3.87792 | opp_overlap 1711209 1711211, overlap 1711207 1711205 1711211 ACGAATCCCAGCAAG ACCATCACCTCCAGGTATG CAT TATGCGGGGAGGTGATGGC TATTCTTTTTAGTTT TERM 2699 1711211 - 1711249 + g 74 -13.2 -2.90235 | opp_overlap 1711211 1711209, overlap 1711210 1711207 1711205 CGAATCCCAGCAAGA CCATCACCTCCAGGTATG CAT TATGCGGGGAGGTGATGG CTATTCTTTTTAGTT TERM 2700 1711853 - 1711837 - G 78 -3.7 -4.92385 | overlap 1711839 GAGACGGAAATAAAA TGCTTTC GGA GAAAGTA AAGCAGTGCGAAGTA Dole_1437 1713249 - 1712188 - | glycosyl transferase group 1 TERM 2701 1712788 - 1712815 + g 93 -5.6 -5.42259 | gap 1, opp_overlap 1712781, overlap 1712781 1712790 TGAAAAATGGGGGAT CACCGTT-ATCTG TTG CGGATCAACGGCG TTTTTTTCCAGATAG Dole_1438 1714277 - 1713255 - | hypothetical protein Dole_1439 1715162 - 1714317 - | hypothetical protein TERM 2702 1715090 - 1715103 + g 70 -3.7 -4.57073 | overlap 1715079 GCAGCAGGCTTTCCA CCTGG CAGG CCCGG TTTTTGGAAAAAATG Dole_1440 1716652 - 1715201 - | glycosyl transferase family protein TERM 2703 1715474 - 1715456 - G 89 -6.6 -5.14563 | TGTCTCAGGAAAAAA CAGCCGCA GGT TGCCGCCG ATAAACATGTCCTGG TERM 2704 1715505 - 1715520 + g 81 -4 -5.03994 | gap 1, opp_overlap 1715483 1715480 GCCACGATGGCGCCG GTC-TGG AAC CCATGAC TTTTTATCTCTGCGG TERM 2705 1716644 - 1716634 - G 90 -8.2 -4.90455 | overlap 1716624 AGAGACCGATAAAAA CCGG AAA CCGG TCAAGCATCAATCGG TERM 2706 1716688 - 1716698 + r 100 -5.4 -5.75342 | ATGGACTTCCTTTTT TGAC GGC GTCA TTTTTTTTCAAAGGC Dole_1441 1717031 - 1716696 - | GtrA family protein TERM 2707 1716785 - 1716744 - G 89 -6.5 -5.07941 | gap 1, opp_overlap 1716754, overlap 1716747 1716749 AAAATTATAGAAAAA CACGATGCCGGTGGCAACCA CTT TGGCGGCAAGCGGCACC-TG GTTGAAAAAATCGAT Dole_1442 1717986 - 1717048 - | glycosyl transferase family protein Dole_1443 1719137 - 1717986 - | glycosyl transferase group 1 TERM 2708 1718086 - 1718101 + g 81 -3.2 -5.24129 | opp_overlap 1718080, overlap 1718081 GCCACAAAGGCGCGG GCCG CGTTGATT CGGC TTTTTTCTAACGGCA TERM 2709 1718925 - 1718935 + g 74 -2.4 -5.02476 | CAGGATGTATTTTAA GCAC CGG GGGC TTTTTTCACCGATGT Dole_1444 1720033 - 1719113 - | nucleoside-diphosphate-sugar epimerase TERM 2710 1719577 - 1719588 + g 79 -5.8 -4.72846 | GCACTTTTGTCGAGT GCCA GTGA TGGC TTTTTGGGTCTGTGC Dole_1445 1721000 - 1720089 - | lipid A biosynthesis acyltransferase TERM 2711 1720405 - 1720446 + g 74 -2.5 -5.0133 | gap 4, overlap 1720406 ATTGCCACCCCGTTG TGAGG-G-TCGGAGTT-CTGG TCCA CCAGCAAC-CCGATCACCTCG TTTTTTCGCAGGGTA TERM 2712 1721155 - 1721175 + H 71 -4.7 -4.50661 | overlap 1721154 1721151 CTTCATCCACTGACC CACAGAAAT GTG GTCTCTGTG TTTTGGTTGTGAATT TERM 2713 1721236 - 1721246 + H 73 -5.4 -4.65895 | opp_overlap 1721236 CCGTTTCAAAATTAA GTTG CAC CAAC TTTTTACATGAAAAA TERM 2714 1721663 - 1721648 - g 70 -3.9 -4.68593 | CGGATCATTGAAAAA GAGCG GCCCGA CGCCC TTCTGCCCAACCTCG TERM 2715 1722586 - 1722568 - g 79 -7.4 -4.60487 | GAGCATCGGGAAAAA CTACAAGG AGG CCCTGCAG AAGGCGATCCGGTCC TERM 2716 1722983 - 1722943 - g 70 -3.9 -4.61231 | overlap 1722945 CGAGATCCGGAAAAA GCGCC-TCTCCCTGGGCCT GGCCG AGGCCT-GGGAGCCGGTGC CGGTAAGCGGGGTGG Dole_1446 1721408 - 1724608 + | carbamoyl phosphate synthase large subunit TERM 2717 1724850 - 1724868 + F 72 -10.2 -2.92613 | opp_overlap 1724837 1724834, overlap 1724847 ATCGGGCACTGCGCC ACGGTCCG CCA CGGACCGA TCCTTTGCGGTGCAA TERM 2718 1725203 - 1725170 - g 80 -5.1 -4.89393 | overlap 1725173 CAAACTTTATAAAAA CATTCTGGTCATCGG CGAC CCGGAGACCAGCGTG AACCGGTTTATCGCC Dole_1447 1724913 - 1725470 + | hypothetical protein TERM 2719 1725502 - 1725481 - f 87 -10.9 -4.29621 | gap 1 CATAAAGAAAGGAAA GACGCCCGGA CGG TCCGG-CGTC CATGGATAGGGGAAT TERM 2720 1725638 - 1725614 - g 80 -2.1 -5.28983 | gap 1 GGCAAAAGAGAAAAA CTGGGGC-GA CTATCT TCTGCCCGAG GACATGGAACTGATC TERM 2721 1725938 - 1725923 - g 73 -3.2 -4.7416 | opp_overlap 1725923 GGAAAAGGGGAAAAA CCGG GTCATGGT CCGG TTCTACGTGGACACC Dole_1448 1725537 - 1726103 + | hypothetical protein TERM 2722 1726820 - 1726835 + G 70 -2.4 -4.82901 | overlap 1726780 CCCGCCTGGGTATGC CCGGCG CCTT TGCGGG TTTTTATCCGGCCGC TERM 2723 1726963 - 1726935 - g 71 -10.3 -3.53012 | gap 1, opp_overlap 1726936 1726938, overlap 1726936 CCGCCTTCGCGTAAA CGCC-CTGGCCG AAGCCG CGGCCAGAGGCA GCGCCCTGTACGGCC TERM 2724 1726936 - 1726983 + G 73 -3.3 -4.83615 | gap 3, opp_overlap 1726935 1726936, overlap 1726938 1726974 1726976 1726978 CGCCTTCGCGTAAAC GCCCTGGCCG-A-A-GCCGCGGCC AGA GGCAGCGCCCTGTACGGCCCGGTC TTTTTCTGGCCGGTC Dole_1449 1726396 - 1727958 + | hypothetical protein TERM 2725 1728886 - 1728914 + G 100 -19.5 -3.28712 | overlap 1728887 TGGCCAGTGGCAGCT GGCCGCTGCCGGC GCC GCCGGCGGCGGCA TTCTGGGCGCGAACA TERM 2726 1728887 - 1728913 + G 100 -23 -2.57132 | overlap 1728886 GGCCAGTGGCAGCTG GCCGCTGCCGGC GCC GCCGGCGGCGGC ATTCTGGGCGCGAAC Dole_1450 1727951 - 1729375 + | GTP-binding protein HSR1-related TERM 2727 1729676 - 1729627 - f 73 -5.5 -4.57482 | gap 1, overlap 1729634 GCACGCACAAACAAA TGATAAAGCACCAC-CCCGGGAGC GCC GCACCCGAGTGCGGCGCCCACCCA GTCCATATCCCAATC TERM 2728 1729669 - 1729634 - f 100 -13.2 -4.23391 | gap 1, overlap 1729627 CAAACAAATGATAAA GCACCAC-CCCGGGAGC GCC GCACCCGAGTGCGGCGC CCACCCAGTCCATAT TERM 2729 1731200 - 1731210 + G 77 -2.4 -5.1286 | ATACGCCTATCTCGG CGCC ATC GGCA TTTTTATCATTTTTG Dole_1451 1730103 - 1731860 + | TPR repeat-containing protein Dole_1452 1733343 - 1731916 - | major facilitator transporter TERM 2730 1732099 - 1732078 - G 70 -4.3 -4.62302 | GAACAGGGCGAAAAA GAGGGTGGC AATG GCCATACTC AGCATCTGGCCGATC TERM 2731 1733355 - 1733320 - G 100 -17.8 -4.18197 | gap 1, opp_overlap 1733324, overlap 1733324 ACGTTTTATCCAAAA CGAATGCGCCGGTATGA GTT CCATACCGGCGCATT-G ATTGACGGACTGTTC TERM 2732 1733352 - 1733324 - G 100 -19.7 -3.69605 | opp_overlap 1733324, overlap 1733320 TTTATCCAAAACGAA TGCGCCGGTATGA GTT CCATACCGGCGCA TTGATTGACGGACTG TERM 2733 1733324 - 1733352 + g 100 -19 -3.34013 | opp_overlap 1733324 1733320 TTTATCCAAAACGAA TGCGCCGGTATG AGTTC CATACCGGCGCA TTGATTGACGGACTG TERM 2734 1733371 - 1733381 + r 73 -2.4 -5.13354 | overlap 1733373 ATTGACGGACTGTTC ACCG CAA CGGG TTTATTTTTTATCGG Dole_1453 1736916 - 1733383 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 2735 1733836 - 1733854 + g 72 -4.4 -4.62904 | opp_overlap 1733824, overlap 1733844 GTAGCCGTAGCTCAT GGCCATGG CGC CCAGGTCC TTTTTGGCGGTCTTT TERM 2736 1734766 - 1734778 + g 91 -6.9 -5.18561 | opp_overlap 1734766 CTCAATCGTGGTAAA GGCCT CCG GGGCC TTTTTTAGCTCTTTC TERM 2737 1735677 - 1735697 + g 78 -11.1 -3.70149 | TGCACTGGATGGTGC CCCTGGGCG CGG TGTCCAGGG TTTCGGTGATCTCCA TERM 2738 1736158 - 1736173 + g 93 -9 -4.8048 | CTTATATTTGCGGCC GGTGAG CTTG CTCACC TTTTTCATGTAGGCG TERM 2739 1736877 - 1736900 + g 75 -3.8 -4.77757 | gap 1 CATATGCCACGTGGG CAG-CAGCGGT ATT ACCGTCGACTG TTTTCATTTTTCCCA Dole_1454 1737161 - 1737661 + | MarR family transcriptional regulator Dole_1455 1737717 - 1739624 + | NADH:flavin oxidoreductase/NADH oxidase TERM 2740 1739896 - 1739931 + G 84 -13.2 -3.63744 | gap 1, opp_overlap 1739895, overlap 1739894 TCAATCGGATCGAAC CCGGGGGCGACGG-CCC CAT GGGTCCGTCGCGCATGG TCTTTTCAAAACCGG Dole_1456 1739661 - 1740434 + | enoyl-CoA hydratase Dole_1457 1740449 - 1740646 + | hypothetical protein TERM 2741 1740658 - 1740685 + T 74 -11.3 -3.01497 | opp_overlap 1740657 1740653, overlap 1740654 1740661 GTAGCACCAACTGAT GGAGGGGCATG GTCCAA CATGCCCCTCA TGTGATTTCGACTAA TERM 2742 1740661 - 1740682 + T 75 -11.6 -2.7314 | opp_overlap 1740657 1740653, overlap 1740658 1740654 GCACCAACTGATGGA GGGGCATG GTCCAA CATGCCCC TCATGTGATTTCGAC Dole_1458 1741223 - 1740711 - | thioesterase superfamily protein Dole_1459 1742322 - 1741258 - | aminoglycoside phosphotransferase TERM 2743 1742355 - 1742381 + H 100 -6.5 -6.20267 | overlap 1742356 1742357 TGAATGGATGTTTTG TTGCCGGCCAT GGCTG ATGCCCGGCGG TTTTTTTGTTTTTAC TERM 2744 1742356 - 1742380 + H 75 -7.8 -4.285 | overlap 1742355 1742357 GAATGGATGTTTTGT TGCCGGCCAT GGCTG ATGCCCGGCG GTTTTTTTGTTTTTA TERM 2745 1742525 - 1742537 + H 95 -3.4 -6.02345 | overlap 1742531 CTGTCCCCGCAGGTT GCAA TGGCC TTGC TTTTTTTTCTGATTA TERM 2746 1742988 - 1742973 - g 86 -9 -4.61231 | CCACACCGCCAAAAA TCCCCA GGGG TGGGGA TACGCGGTCTTTGGC Dole_1460 1742629 - 1743129 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 2747 1743170 - 1743203 + F 100 -18.3 -5.53991 | AGGGGTGCTTGTCTG CCGGCACCAGGAT AGTCTCGA ATCCTGGTGCCGG TTTTTTTGATCCATA Dole_1461 1743547 - 1745517 + | carbon-monoxide dehydrogenase, catalytic subunit TERM 2748 1745589 - 1745614 + F 100 -16.1 -5.61596 | overlap 1745587 1745590 CGGGAATCTGTAACT CGGGGCGGGCT TTCG AGCCCGCCCCA TTTTTTTATACAAAT TERM 2749 1745590 - 1745613 + F 100 -19.6 -3.95873 | overlap 1745587 1745589 GGGAATCTGTAACTC GGGGCGGGCT TTCG AGCCCGCCCC ATTTTTTTATACAAA TERM 2750 1746234 - 1746201 - g 81 -11.6 -3.83026 | opp_overlap 1746224, overlap 1746202 GCCTCGGAGATCAAA CCCCTGCTGGCCGG AAGCGG CCGGCCGGCAAGGC TTAACGAGGCCCGGC TERM 2751 1746233 - 1746202 - g 84 -15.1 -2.89602 | opp_overlap 1746224, overlap 1746201 CCTCGGAGATCAAAC CCCTGCTGGCCGG AAGCGG CCGGCCGGCAAGG CTTAACGAGGCCCGG TERM 2752 1746313 - 1746329 + G 74 -7.9 -4.13654 | TTGAGGGGGTGCTGC GCCTGCC GCC GGCAAGC TTTCTGATTTACGAC Dole_1462 1745703 - 1747595 + | asparagine synthase (glutamine-hydrolyzing) TERM 2753 1748318 - 1748302 - g 75 -5.7 -4.58685 | AAAGGCTGGCAAAAA GCGGCAC CCG GGGCCAC GAGATGATGAAGGGC Dole_1463 1747845 - 1748780 + | glutamate--cysteine ligase GCS2 Dole_1464 1748777 - 1749037 + | glutaredoxin 3 TERM 2754 1750442 - 1750452 + G 71 -8.2 -4.07568 | overlap 1750428 ACCGCTTCCTGCTCG GCCG GAC CGGC TTTTGAAGGCGGCGG Dole_1465 1749215 - 1751158 + | ferredoxin TERM 2755 1751509 - 1751530 + G 78 -2.9 -5.10461 | overlap 1751495 1751512 GCGGCGGGGCCCCGG TGTTTGCCC ATCC GGTCAATCA TTTTTATTCCGTGCC TERM 2756 1752533 - 1752523 - g 79 -6.8 -4.56597 | overlap 1752525 CGGTTTCTCTAAAAA CACG CTC CGTG CTGGCTGCTGCGGGC Dole_1466 1751286 - 1753100 + | hypothetical protein Dole_1467 1754006 - 1753113 - | NAD-dependent epimerase/dehydratase TERM 2757 1753517 - 1753544 + g 95 -6.2 -5.43866 | gap 1, overlap 1753518 1753520 GCCCCATCACCACGC CGAAC-CGGGTGG CCA CCACCCGGGCTCC TTTTTTTCCGGCTTC TERM 2758 1753518 - 1753543 + g 75 -9.7 -3.85235 | gap 1, overlap 1753517 1753520 CCCCATCACCACGCC GAAC-CGGGTGG CCA CCACCCGGGCTC CTTTTTTTCCGGCTT TERM 2759 1753520 - 1753540 + g 71 -12.5 -2.69257 | overlap 1753518 1753517 CCATCACCACGCCGA ACCGGGTGG CCA CCACCCGGG CTCCTTTTTTTCCGG TERM 2760 1753604 - 1753627 + g 73 -11.6 -3.3382 | opp_overlap 1753603 1753602 CCCTGGCCAGAAAGT CGGCGCCGGG TGTG CCCGGTTCCG TTAATATCTCATCCC TERM 2761 1753990 - 1753978 - G 72 -6.2 -4.36914 | TGGGTGCCGACAAAA CCGG AACTG CCGG TGATGAGGATGTGCA TERM 2762 1754074 - 1754098 + r 70 -10 -3.15579 | overlap 1754068 1754056 1754077 TACGCCCCTCGTCAC TGCGGCGTAC GTTCA GTACGCCTCA TTCCTCGGGGCTTGC TERM 2763 1754077 - 1754095 + r 71 -10.3 -2.78018 | overlap 1754068 1754056 1754074 GCCCCTCGTCACTGC GGCGTAC GTTCA GTACGCC TCATTCCTCGGGGCT Dole_1468 1754994 - 1754179 - | beta-lactamase domain-containing protein TERM 2764 1754585 - 1754601 + g 100 -9.4 -4.87273 | overlap 1754581 1754597 CCATGCTCCACCTGG CACCGG CGGTA CCGGTG TTTTTCTCCGCTGTT TERM 2765 1755069 - 1755046 - R 71 -3 -4.85599 | opp_overlap 1755057, overlap 1755047 TTCACCGCATAAAAA GCAGAGCTCC AGAG GAAGCCCCGT CTGTTTTCAGGCCGC Dole_1469 1756041 - 1755076 - | beta-lactamase domain-containing protein TERM 2766 1755643 - 1755655 + g 78 -4.1 -5.00616 | opp_overlap 1755630 AACGGCCAGGTAGGC GGTGA GGG TCATC TTTTTTCGAAGGCCG Dole_1470 1758863 - 1756083 - | NifA subfamily transcriptional regulator TERM 2767 1756171 - 1756189 + g 76 -3 -5.00884 | overlap 1756153 GCGGCCCCGTCTGGC CCGGCG ATTTTGC CCCCGG TTTTTTCAAGCACGT TERM 2768 1756294 - 1756254 - G 81 -12.5 -3.54424 | gap 1, opp_overlap 1756246, overlap 1756255 GGGCAGGTCGGTAAA CGGATCGGCCC-CGGGCC GCGTAT GGCCCGCGGGCAGGTCCA GTTCCAGGTGGTCTC TERM 2769 1756293 - 1756255 - G 76 -13.8 -2.72511 | gap 1, opp_overlap 1756246, overlap 1756254 GGCAGGTCGGTAAAC GGATCGGCCC-CGGGCC GCGTAT GGCCCGCGGGCAGGTCC AGTTCCAGGTGGTCT TERM 2770 1756545 - 1756584 + g 76 -12.9 -3.14344 | gap 2, opp_overlap 1756538 GTAATAGAGGTCCTC CCGGAACC-GGCC-GGCAG CTAC TTGCCCGGCCAGGTCCCGG TTGGTGGCGGCGATC TERM 2771 1757844 - 1757813 - G 100 -9.4 -4.87665 | gap 1, opp_overlap 1757813 1757812, overlap 1757814 CGGCACCGAGAAAAA GGCGCTGCT-CGGCC ATC AGCCGCAGCAGCACG CCCTTTAAATGAATG TERM 2772 1757843 - 1757814 - G 81 -12.9 -3.52117 | gap 1, opp_overlap 1757813 1757812, overlap 1757813 GGCACCGAGAAAAAG GCGCTGCT-CGGCC ATC AGCCGCAGCAGCAC GCCCTTTAAATGAAT Dole_1471 1758964 - 1759323 + | hypothetical protein TERM 2773 1760407 - 1760389 - g 71 -10.2 -3.53444 | TGAGCGGGTGGCAAA GGTGGCCT ATG AGGCCGCC GGTGTCGGTCCTGAA Dole_1472 1759517 - 1760770 + | Propanoyl-CoA C-acyltransferase TERM 2774 1762106 - 1762096 - g 80 -4.6 -4.91977 | overlap 1762097 CATCAAAAGAGAAAA CCCG TGG CGGA TGGCTGCGCAGCGGC TERM 2775 1762166 - 1762198 + G 85 -10.3 -4.36914 | overlap 1762167 TTTCTATTTTGATTT CCGCAAGGGCGGCGG GCT CCGCCGCCAGGGCGA TTTTGTCCAGCCCGA TERM 2776 1762167 - 1762197 + G 82 -13.8 -3.21934 | overlap 1762166 TTCTATTTTGATTTC CGCAAGGGCGGCGG GCT CCGCCGCCAGGGCG ATTTTGTCCAGCCCG Dole_1473 1760904 - 1762514 + | AMP-dependent synthetase and ligase TERM 2777 1762727 - 1762711 - g 75 -5.7 -4.57073 | overlap 1762679 1762713 TACCGTTGGGAAAAA GGCCAGG TGC CCGAGCC CGTGGGCTACGGCGG Dole_1474 1762579 - 1763583 + | nitroreductase TERM 2778 1763664 - 1763646 - f 75 -10.2 -3.36569 | overlap 1763644 1763657 TCAACTCGTGAAATA TCCGGGCG AAA CGGCCGGA CCGTTGACATCAACA TERM 2779 1764317 - 1764335 + G 71 -10.2 -3.53224 | overlap 1764315 CTACACCGACACCCC GCTGCTGC AAG GCGGCGGC TTTCCCAAAAAACTG Dole_1475 1763730 - 1764539 + | short-chain dehydrogenase/reductase SDR TERM 2780 1765097 - 1765080 - g 72 -4.8 -4.57569 | GCAGGCGGTGAAAAA CAACCG TTTTTT CGGCTG GGGCCTGTCGTCGAA TERM 2781 1765238 - 1765224 - g 71 -7.8 -4.09685 | TCCCATGTTTGAAAA CGCCCT TCG AGAGCG GTATGGCCGCACCAT TERM 2782 1765628 - 1765640 + G 100 -6.3 -5.66989 | opp_overlap 1765626 1765628, overlap 1765630 AGGCAAAAACAACCA TCGAT CAA ATCGA TTTTTTTGATCTTTA Dole_1476 1764688 - 1766208 + | acetyl-CoA acetyltransferase Dole_1477 1766552 - 1766238 - | hypothetical protein Dole_1478 1766826 - 1766566 - | hypothetical protein Dole_1479 1767186 - 1766992 - | hypothetical protein Dole_1480 1769329 - 1767572 - | radical SAM domain-containing protein TERM 2783 1769019 - 1769037 + g 72 -4.5 -4.68103 | GTTTTCGGGGAGACG TGCCGGA TGATC TCCGCCA TTTTCTTGGCCTTGG Dole_1481 1770049 - 1769690 - | dinitrogenase iron-molybdenum cofactor biosynthesis protein Dole_1482 1770674 - 1770066 - | hypothetical protein TERM 2784 1770591 - 1770553 - G 75 -8.8 -4.09243 | opp_overlap 1770569, overlap 1770567 CATATTTTTCCAAAA GCCGGGAAAATAAACCGG TCT CCGTCCTGTTTTGCCGGC AGTATGCGGACCAGG Dole_1483 1771663 - 1770950 - | hypothetical protein TERM 2785 1771382 - 1771348 - G 78 -9.8 -4.07568 | TGCTGCTCCCGAAAA GGCCGGCAAGGCCAAG GGT CTGGGAATGGCCGGCC ACTGCCTGCAACGCG Dole_1484 1773147 - 1772152 - | hypothetical protein TERM 2786 1772818 - 1772805 - G 70 -2.3 -4.72272 | overlap 1772806 CGTTGGTATGAAAAA TCTCC TTCA GGAGG CCGGCCCTCAATAAT TERM 2787 1772844 - 1772855 + g 73 -3 -4.72556 | opp_overlap 1772834 ATAATTGCACCAACT TTGA CGCA TCAA TTTTGTCGTTTTTAG TERM 2788 1773219 - 1773202 - R 70 -9.9 -3.14961 | overlap 1773200 1773198 ATTATCACTAACATA TTGAGGC TGCC GCCTCAA AGGAGACCATCTTTC Dole_1485 1774807 - 1773194 - | iron-sulfur cluster binding protein TERM 2789 1773828 - 1773799 - G 70 -4.2 -4.56597 | opp_overlap 1773822 TGCCGCCTGCAAAAA GATGGGCCACCA GGTCGA TGAGGGCCGATC CGCAGATCGCCTTTG Dole_1486 1775674 - 1774835 - | metal-dependent hydrolase TERM 2790 1775463 - 1775442 - G 84 -2.1 -5.40474 | overlap 1775446 AGGGGTTTAAAAAAA GGAAGCCCC ATGA GGTGATCCC AGTGGGCGTGGGTAA Dole_1487 1776601 - 1775744 - | ribosomal L11 methyltransferase TERM 2791 1775894 - 1775882 - G 74 -6.9 -4.38927 | GCCGGACAGAATAAA GCGGC GGC ACCGC AAAAAACCGGGCCCG TERM 2792 1776477 - 1776452 - G 85 -3.3 -5.40474 | gap 1, opp_overlap 1776458, overlap 1776458 1776459 ATCGGTCGAAAAAAA GAGAA-AGGAGG TGC CGTCCTCTTCCC AGTTGCCGATAAACC TERM 2793 1776470 - 1776458 - G 73 -3.3 -4.72373 | opp_overlap 1776458, overlap 1776452 1776459 CGAAAAAAAGAGAAA GGAGG TGC CGTCC TCTTCCCAGTTGCCG Dole_1488 1777363 - 1776605 - | cobyrinic acid ac-diamide synthase TERM 2794 1777444 - 1777414 - H 75 -11.9 -2.65298 | gap 1, overlap 1777413 1777416 TTTACTTACTATAAT CACGCGGCTTCCGC AAGG GCGGAA-CCGTGTG GCATGAACCGTTTTC Dole_1489 1777593 - 1778165 + | SH3 type 3 domain-containing protein Dole_1490 1778196 - 1779821 + | L-aspartate oxidase Dole_1491 1780556 - 1779825 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 2795 1780221 - 1780209 - G 90 -6.2 -5.28826 | overlap 1780197 AAACGGCAGAAAAAA GGCG TCCGC CGCC ACCAGGTGAATCTGG TERM 2796 1780233 - 1780253 + g 75 -3.9 -4.85782 | overlap 1780223 1780234 CGCCACCAGGTGAAT CTGGTCCTT AAA AGGGGCCAC TTTGTTTTTGCCCGC TERM 2797 1780810 - 1780797 - g 70 -2.3 -4.84359 | TCATCCCGATAAAAA CCCCG GCAA CAAGG AAGCGGAAGATCAGT TERM 2798 1781201 - 1781213 + G 86 -4.7 -5.32944 | GCACCGGCCAGGCCA CCCGG TCC CAGGG TTTTTTCGTTGTCAA Dole_1492 1780684 - 1781781 + | chaperone protein DnaJ Dole_1493 1781835 - 1782224 + | putative 6-pyruvoyl tetrahydropterin synthase Dole_1494 1782221 - 1783144 + | beta-lactamase domain-containing protein Dole_1495 1783141 - 1784052 + | dihydroorotate dehydrogenase family protein Dole_1496 1784142 - 1785341 + | NADH:flavin oxidoreductase/NADH oxidase TERM 2799 1785346 - 1785365 + T 73 -5.6 -4.57073 | opp_overlap 1785349 1785350, overlap 1785350 GTGTATTTTAAAACA GAAGGGGC CGAA GCCCTTAC TTTTTCCGGGCAATG Dole_1497 1787680 - 1785539 - | molydopterin dinucleotide-binding region TERM 2800 1785585 - 1785573 - G 78 -6.2 -4.59853 | opp_overlap 1785573 GGAAGGCCGGAAAAA GCGG CAGTC CCGC TTAAATCAATTCGTT TERM 2801 1785925 - 1785936 + g 70 -2.2 -4.7254 | ACAACAGGTCCGGTC CGTC TGCC GATG TTTTTACTGAAACCT TERM 2802 1787212 - 1787187 - G 80 -2.5 -5.22794 | gap 1, overlap 1787188 ATAATCAGGAAAAAA TCGGT-CCGG TCGATAT CCGGTACCGG GAACATAAGCTGATG Dole_1498 1788214 - 1787765 - | thioesterase superfamily protein TERM 2803 1788050 - 1788028 - G 100 -11.2 -5.08824 | opp_overlap 1788028 CTGCCAGGGAAAAAA TGGCCCCGCC ATG GGCGATGCCA TAGGGATGGGTCAGT TERM 2804 1788305 - 1788331 + H 71 -10.1 -2.75064 | opp_overlap 1788296, overlap 1788303 1788323 AGTCAAGCCGGGACG GTGCCAGGGCA TTGTC TGCCCTGGCGG TCATTGCCTGGCGGG TERM 2805 1789579 - 1789593 + G 71 -11.4 -3.224 | overlap 1789574 1789577 1789585 GCAAGCCTGTCGGCA CACCGG ACG CCGGTG TCTTCTGGCGGATTA Dole_1499 1788636 - 1790543 + | AMP-dependent synthetase and ligase Dole_1500 1791849 - 1790776 - | diguanylate cyclase TERM 2806 1791194 - 1791184 - G 74 -8.2 -4.24204 | overlap 1791185 CATGCACAGCGAAAA CGGG GTA CCCG CCCGGTCTGAAAAGG TERM 2807 1791533 - 1791519 - G 71 -7.8 -4.08974 | overlap 1791523 ATGCCAGGATATAAA GAACCG AGG CGGTCC CGCGTATCCGGTCGA TERM 2808 1791984 - 1791963 - R 89 -5.7 -5.1925 | opp_overlap 1791964, overlap 1791964 1791979 GCAGAAGTCAAAAAA GGGCGCTCG GCAA CGACCGTCC GCCTTCGTCCGGTAC TERM 2809 1792028 - 1792040 + r 87 -5.5 -5.47159 | overlap 1792005 1792005 GCCCCCGGGGGAATT CAGGG CCG CTCTG TTTTTTCTGTTAACG Dole_1501 1793168 - 1792143 - | radical SAM domain-containing protein TERM 2810 1792919 - 1792909 - G 70 -4.6 -4.42386 | overlap 1792910 CCCTGATCGACAAAA GCAG AAG CCGC ATGGAGCATCTGCGT TERM 2811 1793159 - 1793148 - G 76 -7.2 -4.4634 | opp_overlap 1793148 1793149 AACCGGAACAATAAA GGGC CGCT GCCC TGTGGTCATGGGAGG Dole_1502 1793860 - 1793165 - | ribonuclease III TERM 2812 1793205 - 1793226 + g 100 -2.9 -6.20267 | gap 1, overlap 1793198 AGGGCCAGGGCCTTG TGGGCC-GCA TCC TGCTGGGCCG TTTTTTTGTTTTTCC TERM 2813 1793882 - 1793905 + r 71 -3.9 -4.74801 | gap 1, overlap 1793883 AGTAAGGACTTATAG TTGAT-GCCG GGTAA CGGCGATCAG TTTTTCATAGAGTTC Dole_1503 1794760 - 1793876 - | phosphotransferase domain-containing protein TERM 2814 1793961 - 1793937 - G 70 -4.1 -4.68424 | opp_overlap 1793943, overlap 1793939 TAATCGACGTAAAAA TTTCCCGTGGC CTT GCCAAGGGCGA CTTCACTGTTCAGGT TERM 2815 1794582 - 1794572 - G 75 -5.4 -4.57073 | CACGCCGGTTAAAAA CTTC AGG GAAG CGGGCAGGGCGGCTT Dole_1504 1795112 - 1794750 - | TraR/DksA family transcriptional regulator TERM 2816 1795706 - 1795691 - g 72 -4.6 -4.63218 | opp_overlap 1795691 CGGCTTGCAAGAAAA GACCTG ATTT CCGGTC TTTCGGACCTGTGGG Dole_1505 1795313 - 1795963 + | hypothetical protein TERM 2817 1796815 - 1796796 - g 100 -3.4 -5.95166 | opp_overlap 1796796 1796796 1796811 GGGAATGAAAAAAAA CCGGGCCA TGAT TGTGCCGG GTTTTGACGGCCGGC Dole_1506 1796092 - 1796931 + | short-chain dehydrogenase/reductase SDR Dole_1507 1798307 - 1796928 - | hypothetical protein TERM 2818 1797263 - 1797246 - G 77 -10.5 -3.91911 | CGTATGGGAACGAAA CCCCGCC GTCA GGCGAGG AGCGTTTACGCCCAT TERM 2819 1797425 - 1797389 - G 100 -9.9 -5.02074 | overlap 1797391 CGATGCGGTAAAAAA GACCCGTGAGCCGCCTG GTC CAGGCTGCCCCGGGGGC GTTGCGGGACTCTAA TERM 2820 1797422 - 1797391 - G 100 -14.4 -4.13963 | gap 1, overlap 1797389 ATGCGGTAAAAAAGA CCCGTGAGCCGCCTG GTC CAGGCTGCCC-CGGG GGCGTTGCGGGACTC Dole_1508 1801153 - 1798304 - | hypothetical protein TERM 2821 1798671 - 1798657 - G 87 -7 -4.99035 | overlap 1798659 TGAGCCACACAAAAA CGCCGG CTG CCGGTG CCCCCCACAGCATGG TERM 2822 1799341 - 1799315 - G 71 -7.1 -4.12941 | AAGAAACACCATAAA CGGAAGCAGGC CCGCT GCCGGCCACCG TACCCCTTTCCAGTC TERM 2823 1799630 - 1799607 - G 72 -6 -4.37092 | gap 1 ATCCCGCCCAGAAAA CGGC-TGTTGA GAA TCATCATGCCG CCGCCGTACCGTCCG Dole_1509 1801382 - 1802218 + | response regulator receiver protein Dole_1510 1802261 - 1803865 + | WD40 domain-containing protein TERM 2824 1804064 - 1804054 - g 95 -6.8 -5.59879 | CAGAAACAGAAAAAA CCCT GGC AGGG AAGAGCGGCTTAAAA Dole_1511 1804001 - 1804933 + | diacylglycerol kinase catalytic region TERM 2825 1804968 - 1804978 + T 78 -5.4 -4.99312 | CATGCCGGAGGGATG CGAA TTC TTCG TTTTCTTCTTCTCTT TERM 2826 1805133 - 1805108 - T 100 -17.7 -5.55695 | opp_overlap 1805104 GAATAACAGAAAAAA CAGGGGCGAAA GATT TTTCGCCCCTG AAGGTTCCGTAAACA TERM 2827 1805178 - 1805147 - T 83 -11.8 -3.54459 | gap 1, opp_overlap 1805147 1805156, overlap 1805150 1805156 TGAAGGTTCCGTAAA CAACAAAAACACGGC CAG GCCGCGTTTTT-TTG TTATTCCATGCTCTC TERM 2828 1805147 - 1805178 + T 76 -9.6 -3.70109 | gap 1, opp_overlap 1805147 1805150 1805156, overlap 1805156 TGAAGGTTCCGTAAA CAACAAAAACACGGC CAG GCCGCGTTTTT-TTG TTATTCCATGCTCTC TERM 2829 1805176 - 1805150 - T 82 -10.2 -3.90922 | opp_overlap 1805147 1805156, overlap 1805147 1805156 AGGTTCCGTAAACAA CAAAAACACGGC CAG GCCGCGTTTTTT TGTTATTCCATGCTC TERM 2830 1805170 - 1805156 - T 100 -9.2 -5.38549 | opp_overlap 1805147 1805156, overlap 1805150 1805147 CGTAAACAACAAAAA CACGGC CAG GCCGCG TTTTTTTGTTATTCC TERM 2831 1805156 - 1805170 + T 100 -7 -5.95946 | opp_overlap 1805156 1805150 1805147, overlap 1805147 CGTAAACAACAAAAA CACGGC CAG GCCGCG TTTTTTTGTTATTCC Dole_1512 1806108 - 1805179 - | thioredoxin reductase TERM 2832 1805984 - 1805999 + g 80 -4.6 -5.00616 | overlap 1805982 TCCGACGTCAGTACC TGCCCG CCGG CGGCCA TTTTTTCAACCACCA TERM 2833 1806079 - 1806045 - G 77 -12.1 -3.53224 | gap 1, opp_overlap 1806033 CACGGGCCGCGTAAA TGCCGGCGGTCAGGCC GGCA GGCCCG-CCGCCGATA ATCACCAGGTCGTAA Dole_1513 1806442 - 1806113 - | thioredoxin TERM 2834 1806718 - 1806694 - H 70 -10 -3.17714 | overlap 1806684 1806697 GCAAACCCCGAGGAA TGAGGCGTAC TTGTC GTACGCCGCA GTGACGAGGGGTGCA TERM 2835 1806715 - 1806697 - H 71 -10.3 -2.78395 | overlap 1806694 1806684 AACCCCGAGGAATGA GGCGTAC TTGTC GTACGCC GCAGTGACGAGGGGT TERM 2836 1807290 - 1807321 + G 78 -6.6 -4.57569 | gap 1, opp_overlap 1807295 1807297, overlap 1807291 1807297 GTATTCGCGTGAACA TGGA-ACAGCAGGTC TTC GACCTGCTCTATCCC TTTTTAAAGGAGTGC TERM 2837 1807313 - 1807297 - g 73 -12.3 -3.15503 | opp_overlap 1807291 1807290 1807297, overlap 1807295 CGTGAACATGGAACA GCAGGTC TTC GACCTGC TCTATCCCTTTTTAA TERM 2838 1807297 - 1807313 + G 73 -12.3 -3.02973 | opp_overlap 1807297 1807295, overlap 1807291 1807290 CGTGAACATGGAACA GCAGGTC TTC GACCTGC TCTATCCCTTTTTAA Dole_1514 1806890 - 1808203 + | diguanylate phosphodiesterase TERM 2839 1808478 - 1808455 - f 73 -9.6 -3.43187 | opp_overlap 1808449, overlap 1808449 TATAAAAAGGAGGAA GCCGCATTAT AAAA AGAATGCGGC GTGGAGCAAAGATGA Dole_1515 1808490 - 1809167 + | phosphoribosylaminoimidazolecarboxamide formyltransferase TERM 2840 1810293 - 1810258 - g 80 -2.4 -5.27335 | gap 1, opp_overlap 1810258 GTGGCCAAAGAAAAA GGGGGC-CTGATCGGGG CGG CCATGATCAGCGACGCC TTTTTCCCGTTCCGA TERM 2841 1810258 - 1810293 + G 72 -4.6 -4.66833 | gap 1, opp_overlap 1810258 GTGGCCAAAGAAAAA GGGGGC-CTGATCGGGG CGG CCATGATCAGCGACGCC TTTTTCCCGTTCCGA Dole_1516 1809202 - 1810452 + | phosphoribosylaminoimidazolecarboxamide formyltransferase Dole_1517 1810503 - 1810850 + | hydrogenase nickel insertion protein HypA TERM 2842 1811610 - 1811573 - g 75 -11.9 -3.19602 | gap 1, overlap 1811571 GTGCCGATATCAAGA CCCGTGAGTACGCGCTTC GCA GAAGCGCGGTCGC-CGGG GATACCCACCTGTAT Dole_1518 1810975 - 1812021 + | hypothetical protein TERM 2843 1812343 - 1812329 - g 72 -4.9 -4.56597 | TGCCGGCGGTAAAAA GCGCG TTCCC CGCAC CCCTGAAACCTTTGG TERM 2844 1812730 - 1812707 - g 81 -3.1 -5.24129 | gap 1 GGCCGCCAGAAAAAA CCCTCA-CCA TCATC TGGCTGTGGG GCTGGTAAAAAAAGG Dole_1519 1812018 - 1813100 + | A/G-specific adenine glycosylase TERM 2845 1813143 - 1813164 + T 73 -7.1 -4.26903 | opp_overlap 1813142 CTTAATTTAATCGAT CGCCGGTGG TGTG CCCCCGTCG TTTTCATCCAGTGCC Dole_1520 1815467 - 1813134 - | PAS/PAC sensor hybrid histidine kinase TERM 2846 1814120 - 1814142 + g 90 -11.3 -4.28375 | gap 1, opp_overlap 1814108 GAAGCTGGCGCGTTA GGCCGGCGGA CCGG TCCGC-GGCC TTTTGAATCTGTTCC TERM 2847 1815392 - 1815402 + g 74 -8.2 -4.21194 | CCTGTTTTGTCGCCA CGGC CAC GCCG TTTTCAATGATGACC TERM 2848 1815481 - 1815497 + r 76 -9.4 -3.85389 | ATTGGCGTCTCTCAT GGCGGT GCCAG ACCGCC TTTCAGTTCTTGCCG Dole_1521 1816015 - 1815500 - | hypothetical protein TERM 2849 1815751 - 1815764 + g 85 -9.5 -4.42851 | opp_overlap 1815750 1815748 AGCACTCAAAAGCAT CGCCC CCCA GGGCG TTTTCGATTTCTTCC Dole_1522 1816846 - 1816064 - | TPR repeat-containing protein Dole_1523 1817810 - 1816956 - | NADPH-dependent FMN reductase TERM 2850 1817232 - 1817209 - G 75 -5.8 -4.59511 | opp_overlap 1817221 AACAGGTCGGAAAAA CAGCGGGGGC AACG GCCCGGGCCG GCCTGTTTTTCATGA TERM 2851 1817221 - 1817237 + g 79 -5.7 -4.77036 | opp_overlap 1817209 AAACAGCGGGGGCAA CGGCCCG GGC CGGCCTG TTTTTCATGATCCGC Dole_1524 1818965 - 1817952 - | radical SAM domain-containing protein TERM 2852 1818440 - 1818460 + g 74 -6 -4.42653 | overlap 1818441 TCAGATCGATGTTGG CCGCGTCC AGCCA GGGCGCGA TTTTGTCGATGGCGT Dole_1525 1819767 - 1818946 - | methyltransferase type 11 TERM 2853 1820358 - 1820336 - g 78 -9.8 -4.09685 | CGGTACGGCGGAAAA GTCGTGGCCA CAG TGACCACGGC AAAACATGCCCTGTC TERM 2854 1820413 - 1820453 + G 85 -15.6 -3.13403 | gap 2, opp_overlap 1820384, overlap 1820411 1820420 CCTGATCGTGACCGG CCAT-GAGGCCGCGGC-CCA TGG TGGAGCCGTGGCTTCCATGG TGTTGATCCCCGGCA TERM 2855 1820420 - 1820445 + G 79 -13.3 -3.137 | gap 1, opp_overlap 1820384, overlap 1820413 1820411 GTGACCGGCCATGAG GCCGCGGC-CCA TGG TGGAGCCGTGGC TTCCATGGTGTTGAT Dole_1526 1819976 - 1821043 + | 2-nitropropane dioxygenase NPD Dole_1527 1822887 - 1821046 - | peptidase M48 Ste24p TERM 2856 1821178 - 1821156 - G 70 -4.1 -4.56597 | gap 1, opp_overlap 1821172, overlap 1821157 CGGTGCCGTCAAAAA GGACGCACTG GCAG CAG-GCGTCA AAAATCGCCTTTTTT TERM 2857 1821172 - 1821187 + g 76 -3.2 -5.00616 | opp_overlap 1821157 1821156 1821185 GACGCACTGGCAGCA GGCG TCAAAAAT CGCC TTTTTTACGCCGAAA TERM 2858 1822189 - 1822174 - G 77 -10.4 -3.86897 | opp_overlap 1822177 1822178 GGCATCGGCCAGAAA CTCCCG CTGC CGGGAG ACAGCGCTTTGAATC TERM 2859 1822513 - 1822539 + g 77 -10.1 -3.86372 | opp_overlap 1822513 GTCGCCGGGGGAAAA GCCGGCGGCAA AGGCA TTGATGCCGGC TTCTGTTTCCATTAA TERM 2860 1822539 - 1822513 - G 71 -7.9 -4.07568 | opp_overlap 1822513 GTCGCCGGGGGAAAA GCCGGCGGCAA AGGCA TTGATGCCGGC TTCTGTTTCCATTAA TERM 2861 1822739 - 1822698 - G 83 -13.9 -3.53012 | gap 1, opp_overlap 1822683 1822679, overlap 1822681 1822699 CGCCCCCTTTTGAAA GGGCCGATATCTTTAT-GGC GCT GCCGATAAAGATAACGGCCA GGGTGATGACTGTAA TERM 2862 1822738 - 1822699 - G 89 -17.4 -2.71712 | gap 1, opp_overlap 1822683 1822679, overlap 1822681 1822698 GCCCCCTTTTGAAAG GGCCGATATCTTTAT-GGC GCT GCCGATAAAGATAACGGCC AGGGTGATGACTGTA Dole_1528 1823569 - 1822979 - | LemA family protein Dole_1529 1824243 - 1823614 - | rubredoxin-type Fe(Cys)4 protein Dole_1530 1824503 - 1824294 - | hypothetical protein Dole_1531 1825184 - 1824615 - | hypothetical protein Dole_1532 1827106 - 1825181 - | hypothetical protein TERM 2863 1825727 - 1825757 + g 73 -11.2 -3.43492 | opp_overlap 1825732 CTTCGCCAGACCGGA GATCATCAGCCCGT TCC ACGCGGTGATGATC TTGTCGTCGGTATCC Dole_1533 1828461 - 1827103 - | cyclic nucleotide-binding protein TERM 2864 1827310 - 1827320 + g 79 -6.8 -4.65916 | AAATATCTCCTGGAC CAGC TCC GCTG TTTTCTTCGCGTCCG TERM 2865 1828082 - 1828056 - G 100 -15.2 -4.83169 | overlap 1828077 AGCCGGCGATAAAAA GCACGGTGCTGA TGG TCAGAACCGTGC GCGTGGCAAACAGGG TERM 2866 1828564 - 1828540 - R 82 -11.4 -3.3164 | AATCTATTTTTACAA GGCGGCCGTT TCACT AACGGCTGCC GCCCTGTTGCAACAT Dole_1534 1829436 - 1828579 - | alpha/beta hydrolase fold Dole_1535 1830293 - 1829463 - | Fe-S cluster domain-containing protein TERM 2867 1829692 - 1829648 - G 70 -2.6 -4.7373 | opp_overlap 1829660, overlap 1829652 1829653 GCAGGGGAGCAAAAA GAATGGCCGCGTCCGCGGAA CCGGT CTCGGCGGTCATGTCCCTTC CGCCCAGTATCCGGG Dole_1536 1830929 - 1830474 - | rubrerythrin Dole_1537 1831732 - 1830959 - | formate dehydrogenase family accessory protein FdhD Dole_1538 1832314 - 1831760 - | hypothetical protein Dole_1539 1832710 - 1832327 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding Dole_1540 1833946 - 1832738 - | methyltransferase type 11 TERM 2868 1833406 - 1833386 - G 83 -5.3 -5.00884 | opp_overlap 1833396, overlap 1833388 ATGGGCGGCAAAAAA GTCAGTGGC CCG GCCATTGGC CCTTGCCTGAATGCC TERM 2869 1834004 - 1833992 - H 70 -7.7 -3.84406 | overlap 1834000 1834002 TCGCTATGAGAATAA GCATG AAA CATGC CATGTAAATGGCAAA TERM 2870 1834264 - 1834246 - g 77 -8 -4.28049 | opp_overlap 1834246 1834246 1834248, overlap 1834238 GTGAAAAGGTGAAAA CCGCCACC TTT GCCGGCGG CTGTTTCTGGTGCAT Dole_1541 1834167 - 1835228 + | methionine-R-sulfoxide reductase TERM 2871 1835248 - 1835271 + T 88 -13.2 -3.09933 | gap 1, opp_overlap 1835231 CGGGTCGTGTCATTC CGGCTCA-CCG GTC CGGCTGAGCCG TTCGATCAGTTCCGG Dole_1542 1836846 - 1835242 - | TPR repeat-containing protein TERM 2872 1835533 - 1835555 + g 78 -9 -4.13767 | opp_overlap 1835527, overlap 1835534 CTTTTCAAAGCACGG CAGGGCGGCA TGA TGCCGCCCGA TTTTACCATAGGCGC TERM 2873 1835534 - 1835554 + g 76 -12.5 -3.08046 | opp_overlap 1835527, overlap 1835533 TTTTCAAAGCACGGC AGGGCGGCA TGA TGCCGCCCG ATTTTACCATAGGCG TERM 2874 1835933 - 1835901 - G 70 -3.9 -4.63527 | opp_overlap 1835926 1835928, overlap 1835904 CCAGCACCGGAAAAA GAGCGGTCCCGTAGA GGA TCATCAGGGCCGGTC CGTCTCGGCGGGTCT TERM 2875 1836002 - 1836025 + g 71 -12.4 -2.96042 | opp_overlap 1836003 ACCAGTACCGGAAAA AGCCACTGCC ACCA GGCAGTGGCA TCTATGGTCCATCTT TERM 2876 1836024 - 1836003 - G 100 -15.9 -4.63527 | opp_overlap 1836002 CCAGTACCGGAAAAA GCCACTGCC ACCA GGCAGTGGC ATCTATGGTCCATCT TERM 2877 1836698 - 1836718 + g 75 -9.6 -3.79906 | ATATCCTTCAGCCCG CCGGGCCG GGTCA CGGCCGGG TTGTTGTACACATAC Dole_1543 1838402 - 1836882 - | hypothetical protein TERM 2878 1837173 - 1837194 + g 76 -13.7 -2.75064 | overlap 1837170 GGGCAGCAGGTGGAT CTTGGCCGG AATG CCGGCCAGG TGCTTCAATGCCCGG TERM 2879 1837413 - 1837428 + g 78 -3.9 -4.88067 | CTTCATCAGCAGTTC GGCCC GCTGAA GGGTC TTTTTGTCGCTCAGT Dole_1544 1839252 - 1838491 - | phosphotransferase KptA/Tpt1 TERM 2880 1838661 - 1838627 - G 78 -4.1 -5.00616 | gap 2, overlap 1838628 1838629 GGCGCCGGGAAAAAA GTGCCG--GCCCGGGTC TGC GTGCCGGGCAGCGGCGC TTCGGCCGGTTCAGG TERM 2881 1839276 - 1839287 + H 80 -7.2 -4.59207 | overlap 1839284 CCCGGCCCTCCTTGA CCGG CCTT CCGG TTTTCTGGTATTTGT TERM 2882 1839987 - 1840004 + G 71 -11.3 -3.30124 | overlap 1839990 AACATGGGCATGGTG GAACCCG ATCC CGGGTTC TTGTCCGCCCTCCGA TERM 2883 1840402 - 1840416 + G 93 -5.6 -5.40072 | overlap 1840390 AGGCCCATGCCGTGG GCGCCA TGC TGGGGC TTTTTTTCGCCGACC Dole_1545 1839342 - 1840625 + | glutamate-1-semialdehyde-2,1-aminomutase Dole_1546 1842305 - 1840668 - | histidine kinase TERM 2884 1840820 - 1840834 + g 100 -7.8 -5.64006 | opp_overlap 1840809, overlap 1840809 1840822 TAATGGGAAGGGCCT TGCGGG CTT CCCGTA TTTTTTTCGTTGCCT TERM 2885 1840822 - 1840832 + g 78 -8.2 -4.45473 | opp_overlap 1840809, overlap 1840809 1840820 ATGGGAAGGGCCTTG CGGG CTT CCCG TATTTTTTTCGTTGC TERM 2886 1841085 - 1841069 - G 71 -10.8 -3.61178 | opp_overlap 1841079 1841080 GTGATGGAGCGGAAA GCCGGG TGTCG CCCGGC ACTCCGGGGTTGTTC TERM 2887 1841333 - 1841320 - G 74 -2.3 -5.00616 | overlap 1841321 TTGCCGTGCAAAAAA TCGGT GATT ACCGC GTCAAAGGGCAGGGC TERM 2888 1841826 - 1841801 - G 78 -3.9 -4.91109 | TTTTTACGACAAAAA CAATCTCGCCG GATT CGGTAAGCTTG AGGGCGGTGGTGCCC TERM 2889 1841918 - 1841930 + g 87 -7.7 -4.8048 | TATCGATCAGTACCG CCACT TCC AGTGG TTTTTGCTGTACCCC Dole_1547 1843306 - 1842302 - | hypothetical protein Dole_1548 1843619 - 1844239 + | TetR family transcriptional regulator TERM 2890 1845024 - 1845005 - g 71 -7 -4.11216 | GGGCCAGCCGGAAAA GGCCCGCC GCAT GGCATGCC GGTTCACCCGCACCC TERM 2891 1846309 - 1846297 - g 82 -10.5 -4.11216 | overlap 1846282 CCTGCACGGTGAAAA CCGGC GCA GCCGG TAAGGCCACCTGCAC Dole_1549 1844331 - 1846463 + | short-chain dehydrogenase/reductase SDR TERM 2892 1848951 - 1848965 + G 73 -3.5 -4.82667 | opp_overlap 1848925, overlap 1848952 GTGATGCAGGAGACG TCACC CCCCA GGTGG TTTTTGATATGATGC Dole_1550 1846529 - 1849270 + | short-chain dehydrogenase/reductase SDR TERM 2893 1849484 - 1849468 - g 78 -6.5 -4.67607 | opp_overlap 1849481 CCTGGAAGAAATAAA TGTCGGT AAA ACCGGCA TGCCGCTGTCAACCA TERM 2894 1850017 - 1850003 - g 78 -3.5 -5.14965 | ATGGGCAGGAAAAAA GCCGA GATCA TCAGC GTCAAGGCACTTCAG Dole_1551 1849283 - 1850497 + | acetyl-CoA acetyltransferase TERM 2895 1850544 - 1850506 - f 100 -20.3 -3.5518 | opp_overlap 1850515 CGAATAGGCAGACAA CGACGAACAGGGGCGGC CCGGT GCCGCCCCTGCTTGCCG GCCATCAACTTCAAT TERM 2896 1850515 - 1850535 + F 95 -15.4 -2.71144 | opp_overlap 1850506 AGACAACGACGAACA GGGGCGGC CCGGT GCCGCCCC TGCTTGCCGGCCATC TERM 2897 1851073 - 1851127 + G 71 -11.3 -3.21099 | overlap 1851075 GGCCGGGTTTTACGT GGTGCTCTGCCGCACCGAT-GACGCGG CCC CCGCGCCGGACGG-GCGGCTGAGCATG TTCGTGGTGGACGCC TERM 2898 1851075 - 1851125 + G 88 -16.1 -3.17051 | overlap 1851073 CCGGGTTTTACGTGG TGCTCTGCCGCACCGAT-GACGCGG CCC CCGCGCCGGACGG-GCGGCTGAGCA TGTTCGTGGTGGACG Dole_1552 1850573 - 1851727 + | acyl-CoA dehydrogenase domain-containing protein TERM 2899 1852375 - 1852385 + G 72 -4.6 -4.57569 | opp_overlap 1852375 TCCACAGCCAGGACA CGGC CGA GCTG TTTTTCACCAACTGC Dole_1553 1851747 - 1852892 + | acyl-CoA dehydrogenase domain-containing protein TERM 2900 1852975 - 1852920 - f 100 -19.2 -3.68351 | opp_overlap 1852922 GTTTTATCATCGAAA TCGCTATCGGGATCGGGATCGAAATC GATA AACGTCAACCTCGATCCCGATAGCGA TAGCGATTTCGATCC Dole_1554 1853024 - 1854172 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 2901 1854673 - 1854685 + G 75 -5.5 -4.59853 | CTGCACATCAGCCAC GGCTT CTG GAGCC TTTTTCAGACCTTCG TERM 2902 1854741 - 1854757 + G 76 -5.1 -4.84359 | opp_overlap 1854741, overlap 1854717 GGTGATTGAGAAGAT CGGCA TGGGGTT TGCCG TTTTTGTGGCCGTGG Dole_1555 1854172 - 1854810 + | succinate dehydrogenase/fumarate reductase cytochrome b subunit TERM 2903 1855738 - 1855726 - g 83 -4.7 -5.08824 | overlap 1855727 1855728 TGGGTACCCAAAAAA CCCGG GGA CCGGC GGGCCCCTCACGAGA TERM 2904 1856134 - 1856177 + G 72 -5.8 -4.55491 | gap 1, overlap 1856136 GATCACGGCGCCAAC CGGCTGGGCGCCAGCGCCCTG ATG CAGGG-GCTGGCCGACGGCTA TTTTGTGATTCCCTA TERM 2905 1856136 - 1856175 + G 77 -10.6 -3.8823 | gap 1, overlap 1856134 TCACGGCGCCAACCG GCTGGGCGCCAGCGCCCTG ATG CAGGG-GCTGGCCGACGGC TATTTTGTGATTCCC TERM 2906 1856278 - 1856296 + G 75 -11.7 -3.24924 | overlap 1856276 TCCGTAACCCAGTGT GCCGGTC AGGTC GACCGGC TGTTGTCCATCAAGG TERM 2907 1856501 - 1856514 + G 70 -3.7 -4.70879 | opp_overlap 1856497 1856496, overlap 1856488 CCCTGGAAAAGGCCG GCCGG GTGA CCGAC TTTTTCGAGTTTGCC Dole_1556 1854832 - 1856745 + | succinate dehydrogenase flavoprotein subunit TERM 2908 1857327 - 1857357 + G 74 -12.5 -3.01712 | opp_overlap 1857298 CTGCTGCCCCAGGGC CGGCCCGAAGCCG GACAG CGGGTTCGGGCCA TGTTAAAGGCCCACG Dole_1557 1856745 - 1857500 + | succinate dehydrogenase/fumarate reductase iron-sulfur subunit Dole_1558 1857497 - 1858114 + | hypothetical protein Dole_1559 1858359 - 1858985 + | hypothetical protein Dole_1560 1859189 - 1859836 + | hypothetical protein TERM 2909 1859877 - 1859862 - f 72 -6.1 -4.37092 | ACTCCCCTGAGAAAA TCCGG GCCCGA CCGGA AGCCCATGTCCTTGA Dole_1561 1860062 - 1860799 + | ABC transporter-related protein TERM 2910 1860828 - 1860818 - g 71 -6.8 -4.10007 | ACAACTGCTGGAAAA GGTC GCC GACC TGCACGATGTGCCCA TERM 2911 1860958 - 1860930 - g 83 -9.6 -4.27774 | gap 1 ACGAAAAAGGATAAA CCGGGCATCGACA TTCT TGT-GAAGCCCGG AACAAAAGGCGAGAG TERM 2912 1861451 - 1861463 + G 78 -3.4 -5.12068 | opp_overlap 1861451 GGTGGCACGGGGAAA TTCC CGGCA GGAA TTTTTGTTCAATCTG Dole_1562 1860783 - 1861703 + | SufBD protein TERM 2913 1861719 - 1861773 + T 100 -13.2 -4.24948 | gap 2, opp_overlap 1861726 1861729, overlap 1861729 AAACCGATTCCGATT TGAAT--AACAAGAGAGGCCTGAGTG ATTCC CACTCAGGCCTCTCTTGTTCCAGGCA TTTTCCGTGTAATCA TERM 2914 1861764 - 1861726 - T 100 -27 -3.65046 | opp_overlap 1861719 1861729, overlap 1861729 TTCCGATTTGAATAA CAAGAGAGGCCTGAGTGA TTC CCACTCAGGCCTCTCTTG TTCCAGGCATTTTCC TERM 2915 1861761 - 1861729 - T 100 -22.9 -3.96068 | opp_overlap 1861719 1861729, overlap 1861726 CGATTTGAATAACAA GAGAGGCCTGAGTGA TTC CCACTCAGGCCTCTC TTGTTCCAGGCATTT TERM 2916 1861729 - 1861761 + T 100 -22.2 -3.6279 | opp_overlap 1861729 1861726, overlap 1861719 CGATTTGAATAACAA GAGAGGCCTGAGTG ATTCC CACTCAGGCCTCTC TTGTTCCAGGCATTT Dole_1563 1862583 - 1861786 - | tryptophan synthase, alpha subunit Dole_1564 1863807 - 1862587 - | tryptophan synthase subunit beta TERM 2917 1862849 - 1862831 - G 76 -3.1 -5.00616 | GTGTCCTTTAAAAAA GCGTG TTCCGGCCC CACGC CCGGATAGTCCAGGC TERM 2918 1863238 - 1863217 - G 88 -11.5 -4.21194 | opp_overlap 1863225 CCCGATCACGTAAAA GGTGTCCCG CACC CGGGCCACC CAGTGGCGCAGGGCC Dole_1565 1864490 - 1863807 - | phosphoribosylanthranilate isomerase Dole_1566 1865382 - 1864591 - | indole-3-glycerol-phosphate synthase TERM 2919 1865328 - 1865345 + g 78 -3.3 -5.03994 | overlap 1865318 1865331 GTACGCGAAGCCGGG CCGCAGT GACC GCTTCGG TTTTTGTCTGTACGA Dole_1567 1866406 - 1865387 - | anthranilate phosphoribosyltransferase TERM 2920 1865544 - 1865554 + g 84 -2.4 -5.45802 | ACCACCACCACGTTT CGCC GGG GGCC TTTTTCTTTTCCCGA Dole_1568 1866993 - 1866430 - | glutamine amidotransferase of anthranilate synthase Dole_1569 1868585 - 1867098 - | anthranilate synthase TERM 2921 1867572 - 1867582 + g 74 -2.4 -4.92756 | GTCCACCAGCATCAG GTGC TCG GCCC TTTCTTTTTCGTCCT TERM 2922 1867668 - 1867686 + g 80 -10.2 -4.07568 | overlap 1867679 GGTGCCGGCAATGGG CCGCACCG TAG CGATGCGG TTTTCAAGCCGCACC TERM 2923 1868651 - 1868624 - H 100 -17 -5.95946 | opp_overlap 1868624 1868640 1868641 1868642 CGAATAATAAAAAAA GGCCGCATGCTC TTTT GAGCCTGCGGCC TTTTTTATTTTAAAA TERM 2924 1868624 - 1868651 + H 100 -17 -5.79595 | opp_overlap 1868624, overlap 1868640 1868641 1868642 CGAATAATAAAAAAA GGCCGCATGCTC TTTT GAGCCTGCGGCC TTTTTTATTTTAAAA TERM 2925 1868641 - 1868684 + H 78 -7.6 -4.47707 | gap 1, opp_overlap 1868624 1868668 1868676, overlap 1868624 1868640 1868642 1868676 CCGCATGCTCTTTTG AGCCTGCGGCCTTTTTTATTT TAA AAACAAAAAAA-CCGCAGGCG TTCTTTTTGGTCGCC TERM 2926 1868642 - 1868683 + H 78 -11.1 -3.27901 | gap 1, opp_overlap 1868624 1868668 1868676, overlap 1868624 1868641 1868640 1868676 CGCATGCTCTTTTGA GCCTGCGGCCTTTTTTATTT TAA AAACAAAAAAA-CCGCAGGC GTTCTTTTTGGTCGC TERM 2927 1868693 - 1868668 - H 73 -5.5 -4.62069 | opp_overlap 1868642 1868641 1868640 1868676, overlap 1868676 TTTTTATTTTAAAAA CAAAAAAACCG CAGG CGTTCTTTTTG GTCGCCTACGGTTTG TERM 2928 1868676 - 1868704 + H 73 -8 -4.07647 | opp_overlap 1868668 1868676, overlap 1868642 1868641 1868640 TTAAAAACAAAAAAA CCGCAGGCGTTC TTTTT GGTCGCCTACGG TTTGGTTTACGCTAT TERM 2929 1868704 - 1868676 - H 100 -8 -6.20267 | opp_overlap 1868642 1868641 1868640 1868676, overlap 1868668 TTAAAAACAAAAAAA CCGCAGGCGTTC TTTTT GGTCGCCTACGG TTTGGTTTACGCTAT TERM 2930 1868956 - 1868980 + H 70 -10 -3.17714 | overlap 1868959 TGCATCCCTCGTCAC TGCGGCGTAC GACAA GTACGCCTCA TTCCTCGGGCTTTGC TERM 2931 1868959 - 1868977 + H 71 -10.3 -2.78395 | overlap 1868956 ATCCCTCGTCACTGC GGCGTAC GACAA GTACGCC TCATTCCTCGGGCTT TERM 2932 1869269 - 1869302 + G 77 -12.4 -3.53012 | GGGCCGATGTGCTGC TGGTCACCGGCGGG CTGGGT CCCACCGGTGACGA TTTGACCACCGCGGC Dole_1570 1869079 - 1870320 + | competence/damage-inducible protein CinA Dole_1571 1870400 - 1871578 + | amidohydrolase Dole_1572 1871791 - 1872018 + | hypothetical protein Dole_1573 1873385 - 1872027 - | hydroxypyruvate reductase TERM 2933 1872302 - 1872318 + g 72 -6.5 -4.27474 | TATCATCTGTTAATG CCAGGCA GAA TTCCTGG TTTCTTCCTCCCTTT TERM 2934 1872981 - 1872992 + g 84 -2.2 -5.40474 | GCCGGAGAGCAGGCA GATC ACCA GGTC TTTTTTTGACGCGCT TERM 2935 1873025 - 1873035 + g 72 -4.6 -4.56597 | opp_overlap 1873025 GTGCCAGGGCCAGAA TGCG TTG CGCG TTTTTCAGGCCCCCG TERM 2936 1873190 - 1873168 - G 91 -17.7 -3.0263 | ATCAGGGTCTCAACA GCGGCGGCC ATGGG GGCCGCCGC CTTGCCCGCGCCGAT TERM 2937 1873530 - 1873548 + H 75 -5.9 -4.57073 | opp_overlap 1873529 1873530 AGAACAATCAAACAG GGCCGGA ATACG TCCGTCC TTTTTCCAAGGAGTG TERM 2938 1873639 - 1873594 - H 78 -9.3 -4.03078 | gap 1, overlap 1873638 TGAGGACACGATAAA GGTTTCCAATCCAGAAATGA GAAAAGG CCATTTGTGGAT-GGAAACC AAGGAGAGACCATGG TERM 2939 1873982 - 1874007 + G 79 -5.3 -4.78107 | gap 1, overlap 1873983 1873984 ACCTTCTGGCGGCCA TTGCCGAGGGGC AGG GACCC-CGGCGG TTTTTGATCCTGCTG Dole_1574 1873651 - 1874205 + | hypothetical protein TERM 2940 1875597 - 1875585 - g 86 -9.1 -4.66609 | opp_overlap 1875596 CAGCTGAGCGAAAAA GACGC CCG GCGTC TGTCCATCTGGCAGA TERM 2941 1875787 - 1875813 + G 70 -4.2 -4.56597 | overlap 1875788 ACCTCAGTCTGCTTA AGGAGGACGAGC AGA GCGCGGCTTCCA TTTTTGAGGGCACCC TERM 2942 1876022 - 1876037 + G 74 -8.2 -4.18058 | opp_overlap 1876013 1876021 1876022 1876019 CAAATATGAACAGAC CCTGGC CACG GCCGGG TTTTCCAATGTACTT Dole_1575 1874541 - 1876814 + | hypothetical protein Dole_1576 1876884 - 1877657 + | cobyrinic acid ac-diamide synthase TERM 2943 1877678 - 1877711 + T 83 -11.7 -3.60792 | gap 1, overlap 1877679 1877682 AAATCTTTTCTGGGT GGCACGGGCGAAGGCC GCA GGCCTT-GCCCGTGGG TTGTGTCTGCGTCGT TERM 2944 1877679 - 1877710 + T 95 -15.2 -2.75993 | gap 1, overlap 1877678 1877682 AATCTTTTCTGGGTG GCACGGGCGAAGGCC GCA GGCCTT-GCCCGTGG GTTGTGTCTGCGTCG TERM 2945 1877682 - 1877707 + T 95 -15.5 -2.64877 | gap 1, overlap 1877679 1877678 CTTTTCTGGGTGGCA CGGGCGAAGGCC GCA GGCCTT-GCCCG TGGGTTGTGTCTGCG TERM 2946 1877877 - 1877901 + T 100 -14.2 -4.22927 | opp_overlap 1877877 CCAGTGAAAACAAAA CCGCCCCCAG CAGGA CCGGGGGCGG TTTGTATCTTAATAA TERM 2947 1877901 - 1877877 - T 100 -17.1 -5.10933 | opp_overlap 1877877 CCAGTGAAAACAAAA CCGCCCCCAGC AGG ACCGGGGGCGG TTTGTATCTTAATAA Dole_1577 1878723 - 1877971 - | peptidylprolyl isomerase FKBP-type TERM 2948 1878383 - 1878394 + g 76 -4.4 -4.82901 | TCAAGAAAGGCCTGT CCTT CTTC AAGG TTTTTCTGGCCCAGG Dole_1578 1880637 - 1878829 - | TPR repeat-containing serine/threonin protein kinase TERM 2949 1879642 - 1879630 - G 71 -10.5 -3.53343 | AATGGCCGCCTGAAA CCGGC CCT GCCGG TAAAGGATGCCCCCC TERM 2950 1880116 - 1880158 + g 100 -11 -4.87665 | opp_overlap 1880115 1880117, overlap 1880117 CGGCGCCATATAAAC AGCGGTGCCGCCGATGCGCC GGT GGGGCGGTGGCGGCGGCGCG TTTTTCTCAATCACC TERM 2951 1880117 - 1880157 + g 88 -14.5 -3.52117 | opp_overlap 1880115 1880117, overlap 1880116 GGCGCCATATAAACA GCGGTGCCGCCGATGCGCC GGT GGGGCGGTGGCGGCGGCGC GTTTTTCTCAATCAC TERM 2952 1881000 - 1881023 + G 70 -4.5 -4.53602 | TCCGCCGTTCTGAAT GTCATGGGG CCGTCA CCTCACGAC TTTATTTGCTCTGGC Dole_1579 1880793 - 1881596 + | hypothetical protein TERM 2953 1881827 - 1881804 - g 77 -8.2 -4.27584 | gap 1, opp_overlap 1881806, overlap 1881805 ACCGGGAATCCAAAA CTCCACGAAGC GGT GCTTCG-GGAA ATGGCCAAAAAGATC TERM 2954 1882010 - 1881995 - g 100 -6.1 -5.78622 | CGACCTGAAAAAAAA GGTCG CGGCTT CGACC CCGCCCCTGGAAACC Dole_1580 1881723 - 1882598 + | hypothetical protein Dole_1581 1882601 - 1883038 + | hypothetical protein TERM 2955 1883889 - 1883902 + G 78 -6.7 -4.57837 | CACCTGCCGGCTCGT TTGGC CGCC GCCAA TTTTTACCGGGCTGT TERM 2956 1884804 - 1884787 - g 74 -2.6 -4.87318 | opp_overlap 1884787 1884789, overlap 1884779 1884789 GGGAAAAGGCAAAAA CCGCCT TTCAGC AGGCTG TTTCCATGGACCCCG Dole_1582 1883079 - 1885382 + | TPR repeat-containing protein Dole_1583 1885419 - 1886564 + | hypothetical protein TERM 2957 1887007 - 1886977 - g 78 -3.8 -4.93296 | overlap 1886978 1886979 CGATCACTACAAAAA CCGGTACGGCGTTA CCG TGACCCCTTCCCGG GTGATTGTCACCTCC Dole_1584 1886735 - 1887874 + | aspartate aminotransferase TERM 2958 1888496 - 1888514 + G 82 -6.6 -4.77036 | opp_overlap 1888496 1888495 ATACGGCCTGAAAAG CCACCAGG GAT TCTGGCGG TTTTTAATGCTGCGC Dole_1585 1887861 - 1889276 + | RNA methyltransferase Dole_1586 1889810 - 1889325 - | hypothetical protein TERM 2959 1889764 - 1889789 + g 72 -4.7 -4.59424 | gap 1, opp_overlap 1889755 AAAATTCGTCCCTGC CGGGCCTCTGAA TAT TTCAT-GGCCTG TTTTCCTTTCGATTT Dole_1587 1890252 - 1890626 + | hypothetical protein Dole_1588 1890684 - 1891409 + | type IV pilus assembly PilZ TERM 2960 1891467 - 1891483 + F 100 -10.1 -5.65177 | CTGTAAAGGTGGTGG CCGTCCT GAT GGGACGG TTTTTTTGTGCCTGT Dole_1589 1891475 - 1892368 + | alpha/beta hydrolase fold TERM 2961 1892411 - 1892394 - f 93 -8.3 -5.13016 | AATCAAAATTAAAAA GCAGCCG TTTC CGGCGGC ATCCCTATATCATGG Dole_1590 1892435 - 1893298 + | nitroreductase TERM 2962 1893293 - 1893277 - f 74 -4.3 -5.00616 | opp_overlap 1893277 GCCGGCTCGAAAAAA CCCTTGC GTA ACATGGG TTTAGTGATATATTG Dole_1591 1893428 - 1893889 + | putative lipoprotein Dole_1592 1893912 - 1895114 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase Dole_1593 1895878 - 1895186 - | hypothetical protein TERM 2963 1896269 - 1896256 - g 71 -8.1 -4.06419 | GCCGGCCATAAACAA TGCCC TTAC GGGCA CACTACAAACAGGGC Dole_1594 1896064 - 1896375 + | hypothetical protein Dole_1595 1898079 - 1896391 - | glutaminyl-tRNA synthetase TERM 2964 1896622 - 1896637 + g 78 -3.2 -5.08255 | opp_overlap 1896634, overlap 1896623 1896624 GGTAAAGTCCCTGCC TTCGTC ATCA GACGGG TTTTCTTTTAGAAAT TERM 2965 1896955 - 1896937 - G 86 -11.7 -4.07885 | opp_overlap 1896928 GAGTTCCCGGGAAAA CGGCACC ATGCG GGTGCCG GCGTCCGGGTCTTCC TERM 2966 1897055 - 1897067 + g 78 -6.2 -4.6759 | opp_overlap 1897047 TGAATCACGGCCATG CGGC GAGGG GCCG TTTTGTTGAGCTGTT TERM 2967 1898038 - 1897994 - G 75 -8.4 -4.07568 | gap 1, opp_overlap 1898001 GGTTCCGGCGGAAAA CGGGTGACCAGACCGTCGGGA TATT TGCCGGCGGCCAGGTC-CTCG TCAATGATCCGTCGA Dole_1596 1899246 - 1898449 - | hypothetical protein TERM 2968 1898859 - 1898823 - G 78 -14.4 -2.62933 | gap 2, opp_overlap 1898822 CAAGGGGGGATATCA CGCCGGCCTCGGCGCCGG CAG CCAG-GCCG-GGCCGGTG CTCGTTCAGGTCATC TERM 2969 1899168 - 1899154 - G 75 -8.5 -3.96624 | CATGGCCAGTAGAAA GGCGC TGTCC GCGCC GCCGGAAAAAGCCAC TERM 2970 1899562 - 1899539 - g 86 -5.8 -5.06414 | TGCGCCGAAGAAAAA GCGGGCAGCC AAAA AGCAGCCTGC AAAAAAACAGCCGGC TERM 2971 1899668 - 1899644 - g 74 -7.9 -4.13767 | overlap 1899645 1899658 GGTTCTACCGGAAAA CGATGTTGTTG AAA CAACAACCTCA GAAGCCGTTGCACCG TERM 2972 1899701 - 1899723 + G 72 -4.8 -4.56597 | gap 1, opp_overlap 1899672, overlap 1899700 1899701 1899713 GCCACCGGCCGGAGA CGGACGGCC CCAGCC GGCCG-CTG TTTTTGAAAAAACCG TERM 2973 1899768 - 1899736 - g 100 -8.9 -5.00616 | opp_overlap 1899713, overlap 1899738 CTGTTTTTGAAAAAA CCGCCGGCTGTTCAG CGC CGGTGCAGCCGCCGG CCATGGAAAACGGAG TERM 2974 1900011 - 1899993 - g 90 -3 -5.65927 | opp_overlap 1899993 GACGTAAAGAAAAAA CGGACCTA CAG CAAGGCCG ATGTATTTGCCTTTG TERM 2975 1900078 - 1900095 + G 85 -11.3 -4.06993 | opp_overlap 1900078 TGGAGGCCGAAGGCA TGCGGGA CTAT TCCCGCA TTCTTTCCTATGTGG Dole_1597 1899462 - 1900304 + | hypothetical protein Dole_1598 1900647 - 1902179 + | mercuric reductase Dole_1599 1902779 - 1902258 - | acetyltransferase/acyltransferase TERM 2976 1902722 - 1902749 + g 70 -2.6 -4.79752 | overlap 1902725 CTTGGGCGGAAGGCG CGATCCATGTGC CGGC GCCGATGGATGG TTTTATCTTATTGAG Dole_1600 1903651 - 1902785 - | TetR family transcriptional regulator TERM 2977 1903610 - 1903624 + g 77 -2.7 -5.07486 | opp_overlap 1903604 1903603, overlap 1903604 1903611 AAAATGAATGGAGGT GCGGG GCACG CCCGA TTTTTCTTCCAGATC TERM 2978 1904098 - 1904073 - g 76 -4.7 -4.82901 | overlap 1904074 1904094 CGGTCTGGATAAAAA TGACATTGAGG CGGT CATCAATGTCG CGCCCCAGGCCCAAC Dole_1601 1903942 - 1905123 + | Acetyl-CoA acetyltransferase-like protein Dole_1602 1905124 - 1905555 + | hypothetical protein TERM 2979 1905565 - 1905553 - f 87 -5.5 -5.41746 | opp_overlap 1905561 AAGCCCGTAAAAAAA TAGGG AGG CCCCA TGGCGGATTATAAAA TERM 2980 1906082 - 1906117 + G 70 -3.8 -4.57073 | gap 1, opp_overlap 1906100, overlap 1906085 GCAAGGATTACACCG CCCGGGACATGTACGAC ATG GGCCT-CTTGACCCGGG TTTTTGCCGACGATG Dole_1603 1905565 - 1906332 + | enoyl-CoA hydratase/isomerase Dole_1604 1906346 - 1907509 + | acyl-CoA dehydrogenase domain-containing protein Dole_1605 1907526 - 1909106 + | AMP-dependent synthetase and ligase TERM 2981 1909146 - 1909119 - f 72 -10.6 -2.92756 | overlap 1909118 TAACAAGGATTAAAG TCCCTCTCCTGA ATGG TCAGGGAAGGGA TCGAGCGTCAGTGCT Dole_1606 1909220 - 1910578 + | NADH:flavin oxidoreductase/NADH oxidase TERM 2982 1911376 - 1911360 - g 74 -13.7 -2.65116 | overlap 1911357 1911359 CGACGATTTAAACAT GGTGGCC ATG GGCCACC CCAACGTTTATGTCT Dole_1607 1910680 - 1911678 + | amidohydrolase 2 TERM 2983 1912424 - 1912435 + G 70 -2.2 -4.83615 | gap 1 AACCAAAAGAAATCT CG-CC CCT GGTCG TTTTTCTGGCCGGTG Dole_1608 1911691 - 1912518 + | short-chain dehydrogenase/reductase SDR Dole_1609 1912542 - 1913234 + | hypothetical protein TERM 2984 1913436 - 1913450 + G 70 -4.2 -4.58685 | overlap 1913437 GTATCACTGGTCGGT CCGGAA TAT TTCCGA TTTTTGGGCCGCTTT TERM 2985 1914693 - 1914669 - g 83 -14.2 -3.1478 | opp_overlap 1914667, overlap 1914667 AGCATTTGATGAAGA CGGCCGGCCG GTTAT CGGCCGGCAG GGCGAGCTGGTATGC Dole_1610 1913305 - 1915260 + | acetoacetyl-CoA synthase TERM 2986 1915905 - 1915895 - g 77 -8.2 -4.2679 | CAATGTCTATGAAAA GGGC GAC GCCC GGGAAAAGAAAGGGG Dole_1611 1915566 - 1916312 + | hypothetical protein TERM 2987 1916656 - 1916700 + G 75 -12.2 -3.28791 | gap 1, opp_overlap 1916688, overlap 1916655 1916643 GTTGCCGGCGCCGAC TGCCCGG-CAGTCTCCTCCGA CCTG TTGAAGGAGGCTGACCAGGCA TTGTCAGCGGGCGGT TERM 2988 1916797 - 1916787 - g 84 -2.4 -5.40072 | opp_overlap 1916790 GGTGTTTGAAAAAAA GGGC GGC GCCG GGCTGTTTGAGGGAA Dole_1612 1916317 - 1917642 + | glycosyl transferase family protein TERM 2989 1917785 - 1917815 + F 79 -11 -3.53444 | opp_overlap 1917771 1917776 ACAGCAGGGACGGTG CCACCCGCCGCTTG CGG TAGGCGGCGGCCGG TTTGACAACCCGTCC TERM 2990 1918191 - 1918202 + G 95 -2.2 -5.81412 | CAGCCGAGGCAAAGT TCGT GCTG ACGG TTTTTTTTACCTCCA Dole_1613 1917887 - 1918459 + | hypothetical protein Dole_1614 1918597 - 1918857 + | hypothetical protein Dole_1615 1919602 - 1918916 - | response regulator receiver protein TERM 2991 1919184 - 1919199 + g 100 -9 -4.90906 | ACCGCGCCGGCCATC TCCAGG ACCC CCTGGA TTTTTCCTCTTCTGC TERM 2992 1919916 - 1919897 - g 82 -10.6 -4.12942 | overlap 1919887 1919898 TGAAACGGCGGAAAA GGCCGGCC CCGC GGCCGGCG TGAACACCGAGGTGT TERM 2993 1919915 - 1919898 - g 83 -14.1 -3.07283 | overlap 1919887 1919897 GAAACGGCGGAAAAG GCCGGCC CCGC GGCCGGC GTGAACACCGAGGTG Dole_1616 1919775 - 1920341 + | hypothetical protein TERM 2994 1920405 - 1920367 - g 74 -6.7 -4.5115 | gap 1 GACAAAAATCGAAAA CCTGCG-CAACATCGGCA TCAT TGCCCATATCGACGCCGG CAAGACCACGGTGAC TERM 2995 1921939 - 1921915 - g 70 -4.1 -4.58283 | CAATGTGTTTAAAAA CAGCCTGGCCC CGG AGGCCATTCCG CCCCAGTTTCTGCCG Dole_1617 1920338 - 1922380 + | translation elongation factor G TERM 2996 1922678 - 1922690 + G 80 -4.7 -4.94058 | opp_overlap 1922660 1922679, overlap 1922679 GTCGACGGCTGATCA ACCGG GTG CCGGC TTTTGTTTCCATTCA TERM 2997 1922760 - 1922776 + G 85 -3 -5.38047 | GGCCGGAAGTGCCGT TGATTC AAAAA GGATCA TTTTTTATCTGCATG TERM 2998 1922790 - 1922801 + G 84 -2.2 -5.47159 | CATTTTTTATCTGCA TGGC GGCG GCTA TTTTTTCTGTTCCCC TERM 2999 1923242 - 1923256 + G 77 -2.7 -5.06414 | overlap 1923243 CCTTTGGCGATTTTT CCGGC CTGCC GCCGC TTTTTATTCAGGCGG Dole_1618 1922539 - 1923459 + | alpha/beta hydrolase domain-containing protein Dole_1619 1925581 - 1923473 - | hypothetical protein TERM 3000 1924626 - 1924641 + g 72 -4.6 -4.62069 | opp_overlap 1924624, overlap 1924624 CCATCGGAATAGACG CCGGCT CCGT AGGCGG TTTTTGCGGTCAGGC Dole_1620 1925903 - 1926325 + | MarR family transcriptional regulator TERM 3001 1926318 - 1926328 + F 73 -4.6 -4.74787 | opp_overlap 1926314, overlap 1926314 GGCTGTTAAAAGACA TGGC GTA GCCG TTTCTTTCTATTTGT TERM 3002 1926740 - 1926764 + G 78 -4.1 -4.87626 | opp_overlap 1926742, overlap 1926742 CCTTTGGCCTGACGA TACTGCGCGCC CTG GGCTCCCAGAA TTTTTACTCTTCCGC TERM 3003 1926985 - 1926939 - g 88 -15.1 -3.54424 | CCCCATCGTGTTAAA GGAGGTCGCCGACAACCCGGA CAAGC TCCTGGTCGCCATCGACCCCC GCCGCAGCGAAACCG TERM 3004 1927428 - 1927415 - g 77 -2.3 -5.14965 | overlap 1927417 1927418 AGCGGGACGAAAAAA CATGG CGCA CCGTG GCCACCCACATGCCG TERM 3005 1927682 - 1927695 + G 77 -2.3 -5.07567 | GTACGTTTTACGAGT CCTGG GACA CCACG TTTTTTCCCATGTCC TERM 3006 1928067 - 1928028 - g 70 -2 -4.83169 | gap 2, opp_overlap 1928049, overlap 1928014 1928030 AGCCTTTTACAAAAA CGCCATG--CGGGCCGGG TTCGCG CCGGGCCCGGACCTGGGG GACCGCCTGTTTGCC Dole_1621 1926385 - 1928625 + | nitrate reductase Dole_1622 1928900 - 1929238 + | type IV pilus assembly PilZ TERM 3007 1929466 - 1929493 + G 83 -4.8 -5.07567 | gap 1, overlap 1929457 1929456 1929469 CAATTCGCAGGTGCT GCTGTCTTCCTGG TAT CC-GGAAGACTTC TTTTTTCGCCTCTGC TERM 3008 1929469 - 1929490 + G 87 -9.5 -4.63089 | gap 1, overlap 1929466 TTCGCAGGTGCTGCT GTCTTCCTGG TAT CC-GGAAGAC TTCTTTTTTCGCCTC TERM 3009 1929633 - 1929603 - g 72 -5.4 -4.55287 | overlap 1929606 CCGAGGTATACAAAA TAAGCATGATCGTC CAG AACGATCCCGCTGA AACCATTCAACGGCT TERM 3010 1929630 - 1929606 - g 74 -7.1 -4.38744 | overlap 1929603 AGGTATACAAAATAA GCATGATCGTC CAG AACGATCCCGC TGAAACCATTCAACG TERM 3011 1929713 - 1929702 - g 78 -3 -5.05782 | AGGGAGCGGAAAAAA TTAC CGTG GTAA AAGAGGGGAACCGCG Dole_1623 1929341 - 1929904 + | hypothetical protein TERM 3012 1929936 - 1929965 + F 79 -9.9 -3.85159 | overlap 1929940 CGCAAGCGCCACCCC GGGAGCGCCGCAC CCCA GTGCGGCACTATC TTGTTGAGTTTTTAA TERM 3013 1929940 - 1929961 + F 82 -11.5 -3.29576 | overlap 1929936 AGCGCCACCCCGGGA GCGCCGCAC CCCA GTGCGGCAC TATCTTGTTGAGTTT Dole_1624 1930387 - 1931868 + | DnaJ central domain-containing protein TERM 3014 1932478 - 1932457 - g 73 -2.9 -4.81752 | opp_overlap 1932457 1932476, overlap 1932477 AAAAACACTTAAAAA GGCTACATG TTCA CATCAAGCC TTTGGAGAAAAAGGG Dole_1625 1931979 - 1932851 + | hypothetical protein Dole_1626 1932916 - 1933470 + | hypothetical protein TERM 3015 1933526 - 1933514 - T 100 -10.5 -4.57569 | TGACCCGGCCAAAAA GCGGC CGG GCCGC ACAGTTCAGGCGTTC Dole_1627 1935690 - 1933714 - | ABC transporter-related protein TERM 3016 1934945 - 1934989 + g 100 -12 -5.52384 | gap 1, overlap 1934931 CCGGCCCCGCGGTCG GGCAGGTCCGGT-GCCGGCGG CGGG TCGCCGGGGACCGGGGCCGCC TTTTTTTCATCCGAC TERM 3017 1935250 - 1935289 + g 71 -7.7 -4.08216 | gap 1, opp_overlap 1935270, overlap 1935248 1935280 GAGTTCGCCGGGCCG GTGGCCGG-AGCGGTGGG AAAGG CCCACCTCGGCCAGCCGC TTTTCGGCCCGGTCC Dole_1628 1936821 - 1935841 - | RND family efflux transporter MFP subunit TERM 3018 1935893 - 1935883 - G 74 -8.2 -4.14392 | opp_overlap 1935888 CCCGAACGGCGAAAA GGGG TTT CCCC CGGTCTGGCCGGCGG TERM 3019 1936177 - 1936159 - G 76 -4.4 -4.74103 | overlap 1936161 GCCGGAACGGAAAAA GTCGGGCA GGG TGCCGGGC AGGATATCCACCTCG TERM 3020 1936614 - 1936633 + g 87 -9.2 -4.66833 | overlap 1936600 1936599 TCCGGCCGTTGATGG CCGGCTTG ATCT CCAGCCGG TTTTTGGGCTTGACC Dole_1629 1938118 - 1936802 - | outer membrane efflux protein TERM 3021 1937114 - 1937138 + g 71 -7.8 -4.0162 | gap 1, overlap 1937088 TGTCGCCTGGGCCTC GGCCTGGCGCA CCCG TGCCCC-GGCC TTTCTCATCTCGGCA TERM 3022 1938086 - 1938073 - G 80 -9.5 -4.19577 | opp_overlap 1938072, overlap 1938049 CAAGTGCGAAAAGAA CCGGC AGCC GCCGG GTTAACTGCTGAATG Dole_1630 1939810 - 1938386 - | peptidase M48 Ste24p TERM 3023 1939396 - 1939407 + g 78 -3 -5.08169 | CCAGGCCGATCTTTT TTGA TTTT TCAA TTTTTTCAGATATGT TERM 3024 1939612 - 1939600 - G 78 -6.2 -4.56597 | overlap 1939602 TGGGGTCGGGAAAAA CGGC GGCCA GCCG CTTGCCCAGGGCCTC TERM 3025 1939880 - 1939894 + H 91 -11.4 -4.2717 | AAAGAACTGCGGTTT TCCGGC CCG GCCGGA TTTTACTACAATAGT Dole_1631 1939930 - 1940721 + | cobyrinic acid ac-diamide synthase TERM 3026 1940804 - 1940784 - g 90 -8.1 -4.87389 | opp_overlap 1940796, overlap 1940786 GAGCCGAAAAAGAAA CGGGCCCTG GGC CGGGGCCTG GACGCCCTGTTTCCG TERM 3027 1941016 - 1940989 - g 75 -8.4 -4.08216 | gap 1, overlap 1940993 TGATTGTCCGGAAAA CCGA-CACCGGCT ACG AGCTGGTGGCCGG CGAACGCCGGCTCCG TERM 3028 1941484 - 1941473 - g 79 -7.2 -4.56775 | opp_overlap 1941475, overlap 1941474 1941475 AGGGCCCCTGAAAAA GCCG GCCC CGGC GGACGCGGCCCATTT Dole_1632 1940724 - 1941641 + | parB-like partition protein TERM 3029 1941709 - 1941676 - f 71 -8.8 -3.66424 | gap 2, opp_overlap 1941676, overlap 1941666 TAAAACGACCTGAAA CGGGCAG-C-ACGGGC CAGG GCCCGCAGACGGCCCG TTTGTAGTGACGCCG TERM 3030 1941767 - 1941754 - f 73 -8.1 -4.11585 | ACTGACCAGAAACAA TGCCC TTAC GGGCA CCAGGGCCGCAGACG TERM 3031 1941770 - 1941787 + F 73 -8.3 -3.96148 | overlap 1941771 GCCCTTACGGGCACC AGGGCCG CAGA CGGCCCG TTTGTAGTGACGCCG TERM 3032 1941771 - 1941786 + F 78 -11.8 -2.97475 | overlap 1941770 CCCTTACGGGCACCA GGGCCG CAGA CGGCCC GTTTGTAGTGACGCC TERM 3033 1941845 - 1941832 - f 73 -8.1 -4.11585 | ACCGATCAGAAACAA TGCCC TTAC GGGCA CACTACAAACAGGGA TERM 3034 1941884 - 1941904 + F 73 -3.2 -4.98672 | GTTTTCCGTCACCCC GGGCCTGA CCCGA TTAGACCC TTTTCTGTTTTTCGG Dole_1633 1941931 - 1942458 + | hypothetical protein TERM 3035 1942601 - 1942641 + T 86 -12.5 -3.53012 | opp_overlap 1942606 1942625, overlap 1942606 GGAGCAATGGATAAA AAAAACGGGCAGGGGCATG AAC CATGCCGCTGCCCGTTGAA TTTAAAAAGGCGGCG TERM 3036 1942636 - 1942606 - T 100 -21.2 -5.97575 | opp_overlap 1942606 1942601, overlap 1942625 AATGGATAAAAAAAA CGGGCAGGGGCATG AAC CATGCCGCTGCCCG TTGAATTTAAAAAGG TERM 3037 1942606 - 1942636 + T 100 -21.2 -3.27525 | opp_overlap 1942606 1942625, overlap 1942601 AATGGATAAAAAAAA CGGGCAGGGGCATG AAC CATGCCGCTGCCCG TTGAATTTAAAAAGG TERM 3038 1942643 - 1942686 + T 100 -10.2 -5.00196 | opp_overlap 1942625 1942650, overlap 1942645 1942650 CGCTGCCCGTTGAAT TTAAAAAGGCGGCGGCCGTC ACAC GACCGGCGCCGCCTTTTGCG TTTTATTGTTTCGGA TERM 3039 1942645 - 1942684 + T 90 -15 -2.74335 | opp_overlap 1942625 1942650, overlap 1942643 1942650 CTGCCCGTTGAATTT AAAAAGGCGGCGGCCGTC ACAC GACCGGCGCCGCCTTTTG CGTTTTATTGTTTCG TERM 3040 1942676 - 1942650 - T 100 -15.8 -4.74103 | opp_overlap 1942650 1942645 1942643, overlap 1942625 CGTTGAATTTAAAAA GGCGGCGGCCGT CAC ACGACCGGCGCC GCCTTTTGCGTTTTA TERM 3041 1942650 - 1942679 + T 100 -14.9 -4.4836 | opp_overlap 1942625 1942650, overlap 1942645 1942643 CGTTGAATTTAAAAA GGCGGCGGCCGTC ACAC GACCGGCGCCGCC TTTTGCGTTTTATTG Dole_1634 1944080 - 1942689 - | hypothetical protein TERM 3042 1942818 - 1942806 - G 72 -9.1 -3.85698 | opp_overlap 1942806 GGCCTCTTCCATAAA CCGGT TGT ACCGG TTTTTGCACTCGTAG TERM 3043 1942806 - 1942818 + g 86 -9.1 -4.63527 | opp_overlap 1942806 GGCCTCTTCCATAAA CCGGT TGT ACCGG TTTTTGCACTCGTAG TERM 3044 1943610 - 1943587 - G 79 -5.2 -4.72272 | CCGTGGCAGTAAAAA CAACCTGAGG TCCG CTCCAGGTCG CTGTTCATACCGTCA Dole_1635 1944643 - 1944101 - | NapC/NirT cytochrome c domain-containing protein TERM 3045 1944953 - 1944940 - H 73 -8.1 -4.11585 | ACCGATCAGAAACAA TGCCC TTGC GGGCA CACTACAAACAGGGG TERM 3046 1944981 - 1944965 - H 71 -9.3 -3.60104 | opp_overlap 1944965, overlap 1944963 GGCACACTACAAACA GGGGTCC CGT GGCCCCC TTGAATCCTTGAACC TERM 3047 1945338 - 1945328 - g 74 -6.8 -4.34345 | GAGATATTATGAAAA CCGA TAT TCGG GAGATATGCCGGGAG Dole_1636 1945027 - 1945896 + | dimethyladenosine transferase Dole_1637 1945899 - 1946306 + | hypothetical protein TERM 3048 1946624 - 1946613 - g 70 -3.6 -4.58213 | overlap 1946621 GAATCAAGCAGAAAA CCGA CATA CCGG TGGTGGTGCTGACCA Dole_1638 1946303 - 1947244 + | radical SAM domain-containing protein TERM 3049 1947522 - 1947552 + G 100 -13.9 -5.14563 | overlap 1947521 1947549 GGGCACCGTCTACCG GGCCGCGGATGAC CCTGT GTCTGCCGCGGCC TTTTTTGATGAGGCC Dole_1639 1947265 - 1948197 + | TPR repeat-containing protein TERM 3050 1948823 - 1948839 + G 70 -3.7 -4.56597 | TGTGGCCAGTATTCA GATCG CCGGCAA CGATC TTTTTCGCAAAGGGG Dole_1640 1948266 - 1949486 + | MscS mechanosensitive ion channel Dole_1641 1949517 - 1950281 + | cyclase family protein Dole_1642 1950313 - 1951350 + | enoyl-CoA hydratase/isomerase TERM 3051 1951911 - 1951859 - g 91 -7.6 -5.1101 | gap 1, opp_overlap 1951892 CTATTATTCAAAAAA GAAGGGCAGGGTCCAGCCCCTTGAC ATGA GCCAGGGGACCGC-CTCTTCCCTTC GTCTGGCCATGATCG TERM 3052 1952051 - 1952061 + G 72 -4.6 -4.57569 | TACCGAACATTTCTC CCTG CCG CGGG TTTTTCCCGAGCTGC TERM 3053 1952306 - 1952292 - g 75 -4.2 -4.7254 | opp_overlap 1952302, overlap 1952278 ACCTTTGACGAAAAA GGCC GCCTGCT GGCC CGGGCCGATCTTGTG Dole_1643 1951350 - 1952498 + | saccharopine dehydrogenase TERM 3054 1952894 - 1952876 - g 77 -8 -4.38712 | opp_overlap 1952893, overlap 1952877 TTGACGCGGATAAAA TCGACGCC ATC GGCGCCGT GGGCGTGGCCCGGGC TERM 3055 1952893 - 1952877 - g 71 -11.5 -3.22906 | overlap 1952876 TGACGCGGATAAAAT CGACGCC ATC GGCGCCG TGGGCGTGGCCCGGG TERM 3056 1953083 - 1953068 - g 90 -4.6 -5.4477 | opp_overlap 1953077, overlap 1953057 1953056 AAACCGGCAAAAAAA TGGCCG AGGC CCGCCA CCGGTTCATGGAGAC Dole_1644 1952509 - 1953141 + | metal dependent phosphohydrolase Dole_1645 1953179 - 1953937 + | phosphoribosylglycinamide formyltransferase Dole_1646 1954134 - 1956332 + | catalase/peroxidase HPI Dole_1647 1957786 - 1956431 - | glutamate dehydrogenase TERM 3057 1956921 - 1956935 + g 84 -7.1 -4.75174 | overlap 1956919 GCATATTCGTTGACC CGTCC CCGGC GGACG TTTTTGAGTTCCATG TERM 3058 1957229 - 1957239 + g 90 -3.2 -5.67063 | GAGCACGCCGGTATG TTCG TTG CGGA TTTTTTTGTAATAGC TERM 3059 1957837 - 1957875 + r 89 -13.1 -3.58726 | opp_overlap 1957842 1957844, overlap 1957838 ATTTTTTGATCCGCA TATGACACGCGTCCCGC CGGTA GCGGGACGCGTGTAAAC TTGTGTATGAGCGGG TERM 3060 1957838 - 1957874 + r 100 -16.6 -2.75022 | opp_overlap 1957842 1957844, overlap 1957837 TTTTTTGATCCGCAT ATGACACGCGTCCCGC CGGTA GCGGGACGCGTGTAAA CTTGTGTATGAGCGG TERM 3061 1957870 - 1957842 - R 100 -22.5 -2.62983 | opp_overlap 1957838 1957837, overlap 1957844 TTGATCCGCATATGA CACGCGTCCCGCC GGT AGCGGGACGCGTG TAAACTTGTGTATGA TERM 3062 1957868 - 1957844 - R 100 -19.3 -2.85668 | opp_overlap 1957838 1957837, overlap 1957842 GATCCGCATATGACA CGCGTCCCGCC GGT AGCGGGACGCG TGTAAACTTGTGTAT Dole_1648 1958472 - 1957891 - | hypothetical protein TERM 3063 1958075 - 1958065 - G 70 -2.4 -4.83615 | opp_overlap 1958065 CAGTTTGGAGAAAAA GGGC CGG GCGC TGTTGGTGTCTACCA TERM 3064 1958239 - 1958218 - G 70 -4.3 -4.56775 | overlap 1958205 ATGGTCTTTTAAAAA GGCCGCG GCCTTTTG CGCGTCC ATCTCTTCCGCGGAC TERM 3065 1958509 - 1958535 + r 85 -10.2 -4.07687 | opp_overlap 1958516, overlap 1958510 1958512 1958516 1958533 1958534 GTTTACCTGTATTCT GCATAAACCCGG TTT TCGGGTTTATGG TTTTCCAGCAGAGCT TERM 3066 1958510 - 1958534 + r 86 -13.7 -3.04398 | opp_overlap 1958516, overlap 1958509 1958512 1958516 1958533 TTTACCTGTATTCTG CATAAACCCGG TTT TCGGGTTTATG GTTTTCCAGCAGAGC TERM 3067 1958512 - 1958532 + r 72 -10.5 -3.08032 | opp_overlap 1958516, overlap 1958510 1958509 1958516 TACCTGTATTCTGCA TAAACCCGG TTT TCGGGTTTA TGGTTTTCCAGCAGA TERM 3068 1958516 - 1958528 + r 71 -6.9 -4.208 | opp_overlap 1958516, overlap 1958512 1958510 1958509 TGTATTCTGCATAAA CCCGG TTT TCGGG TTTATGGTTTTCCAG TERM 3069 1958748 - 1958764 + r 74 -3 -5.0133 | gap 1, overlap 1958748 1958751 GGAGGCAGGTCAGGT CAGGCAG GGTC CTGC-TG TTTTTTGAGCCGCTG Dole_1649 1960186 - 1958747 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 3070 1958947 - 1958964 + g 71 -12.7 -2.53015 | GAATGTCGTCCAGCA TGGCCCG CAGC CGGGCCA TGAGTTGCGCGGTGT Dole_1650 1962030 - 1960192 - | histidine kinase TERM 3071 1960384 - 1960352 - G 78 -4.2 -5.00616 | gap 1, opp_overlap 1960362 1960371, overlap 1960353 1960360 TTTGTGGTGAAAAAA GGCTCAAAGATCGTA TTGA CACGATCTTCG-GCA ATGCCGTGGCCTGTG TERM 3072 1961110 - 1961099 - G 74 -7.2 -4.3739 | overlap 1961080 1961100 1961101 GACTCGGCGATAAAA CCGG CGGC CCGG CTCAGGCTGCGAATG TERM 3073 1961517 - 1961496 - G 100 -6.5 -5.68023 | gap 1, overlap 1961500 TGAGAACGAAAAAAA CGATGCGGGC CGT GCCCAC-CCG GCCGTACAGGGTGCC TERM 3074 1961527 - 1961550 + g 74 -13.8 -2.60075 | overlap 1961526 1961529 CACCCGGCCGTACAG GGTGCCGGCC AGTT GGCCGGCGTC GTTGATTACCGGCGC TERM 3075 1961529 - 1961548 + g 73 -12.8 -2.84098 | overlap 1961527 1961526 CCCGGCCGTACAGGG TGCCGGCC AGTT GGCCGGCG TCGTTGATTACCGGC Dole_1651 1962915 - 1962085 - | ABC transporter-related protein Dole_1652 1963985 - 1962912 - | transport system permease protein TERM 3076 1962981 - 1962966 - G 72 -4.6 -4.56597 | overlap 1962978 GGGCGCTCCGAAAAA GGCCGT GAGA ATGGCC ACCGGCAGCATTCTC TERM 3077 1963464 - 1963437 - G 70 -12 -2.78032 | gap 1, overlap 1963436 1963434 GGCCGCGGAAAACAG GGCGCCCAG-GGC CAC GCCGCTGAGCACC AGCACTTCCGGGCTG TERM 3078 1963652 - 1963632 - G 74 -8.1 -4.21908 | GATCATCACGGAAAA GGCGGCGCC GAA GGCTCCGGC CTGTGAGATGCCCAG TERM 3079 1963862 - 1963824 - G 72 -4.5 -4.59773 | gap 2, overlap 1963825 GCCCAGGCCGAAAAA GGCCCGG-AC-CACTTCCG CGG CGGGAATGCGCACCGCGCC CAGGGAAACGGCCAT Dole_1653 1965160 - 1964000 - | periplasmic binding protein TERM 3080 1964866 - 1964896 + g 75 -5.3 -4.59109 | overlap 1964868 GGGCCACGGCATAGG GCCGGGCCTCC ACGGAAAAG GGAAGCCCGCC TTTTTCCGCGCTGTC TERM 3081 1965233 - 1965188 - R 95 -7.7 -5.4505 | gap 1, opp_overlap 1965188 1965186 TCGGCCAATAAAAAA GCCATGAAAGTTTTTCAGGC ACTGCCG GCCTGATCA-CCTTCATGGC TCTATTTTTTAAAAA TERM 3082 1965238 - 1965248 + r 74 -2.6 -5.08824 | ACCTTCATGGCTCTA TTTT TTA AAAA TTTTTTGCGTACCGC TERM 3083 1965556 - 1965541 - R 83 -4.6 -5.1971 | opp_overlap 1965541 ACGAAAAAGCAAAAA CCCTAC CGCT GAAGGG CTTTGAGGCGTTGTT Dole_1654 1967807 - 1965543 - | O-antigen polymerase TERM 3084 1965977 - 1965966 - G 86 -5.8 -5.06451 | overlap 1965968 CATGAGGGCAAAAAA CAGG TCGG CCTG GGCAGGATGGGCCTC TERM 3085 1966130 - 1966162 + g 90 -7.6 -5.00616 | gap 1, overlap 1966132 1966151 CCTCGGCCCGGGAGA CGGGCA-GGCCGGCC TTCA GGGCGGCTGTGCCGG TTTTTTGAAGCAGGG TERM 3086 1967622 - 1967609 - G 72 -9.5 -3.76411 | GGAAAAGGATGTAAA GGCCC AGCA GGGCC AGGGGCAGGAGGCAG Dole_1655 1968539 - 1968243 - | excinuclease ABC subunit C Dole_1656 1969417 - 1968731 - | protein-tyrosine-phosphatase Dole_1657 1971579 - 1969414 - | non-specific protein-tyrosine kinase TERM 3087 1970140 - 1970155 + g 90 -10.4 -4.65078 | CGGAATGGTGGCGAT GACCGG GACG CCGGTC TTTTCTTCAGCATCT TERM 3088 1971384 - 1971394 + g 77 -2.4 -5.0916 | opp_overlap 1971384, overlap 1971383 GGTATACATCATTAA GGGG ATC CCCG TTTTTCTGTTCCACC Dole_1658 1972531 - 1971698 - | polysaccharide export protein Dole_1659 1973959 - 1972700 - | hypothetical protein TERM 3089 1974251 - 1974222 - R 100 -19.3 -5.32944 | opp_overlap 1974222, overlap 1974223 CCGACAATTAAAAAA GCCGGGCCTGTCG CATG CGACAGGCCCGGA TGGTTGGCCGCAGGT TERM 3090 1974222 - 1974251 + r 100 -19.3 -2.71011 | opp_overlap 1974222 1974223 CCGACAATTAAAAAA GCCGGGCCTGTCG CATG CGACAGGCCCGGA TGGTTGGCCGCAGGT TERM 3091 1974250 - 1974223 - R 100 -22.8 -3.78682 | opp_overlap 1974222, overlap 1974222 CGACAATTAAAAAAG CCGGGCCTGTCG CATG CGACAGGCCCGG ATGGTTGGCCGCAGG Dole_1660 1976348 - 1974273 - | translation elongation factor G TERM 3092 1974420 - 1974437 + g 74 -11.3 -3.54919 | GTAACTCTGGAACTC GCCCATG GGTA CATGGGC TTTGACGACCTGGTT TERM 3093 1974884 - 1974900 + g 73 -3.5 -4.72986 | ACTGTTTCTTGTGCC GGCCCTG GAC CCGGACC TTTTTGGTAAAGGTC TERM 3094 1975083 - 1975115 + g 76 -2.8 -4.87389 | gap 1 TTCCTCGGTCAGCTT GGTGATGGAAGAC TGAAGCTT GTCTTC-ATCCCC TTTATTTTTGGGCTG TERM 3095 1975253 - 1975280 + g 83 -4.8 -5.09426 | gap 1 CGGCAACGATAGCTC CGGGCACGGCCTC ATT GACGCTGT-CCTG TTTTTTCCCCTTGGA TERM 3096 1975301 - 1975320 + g 76 -5 -4.72497 | gap 1, opp_overlap 1975301, overlap 1975302 TCCCCTTGGAGACCA TGAGCTGGT TGA ACC-GCTCG TTTTCTTCCTGGATG Dole_1661 1977209 - 1976451 - | hemolysin A TERM 3097 1977029 - 1977081 + g 79 -12.6 -3.29144 | gap 1 CCCGGCTGACGTAGG GGCAGGCGTCCCGGGTGACGATGGC GGCG GTCACCGGCACCTGA-ACGCCGGCC TTGTCCGCGGGGTGG TERM 3098 1977111 - 1977138 + g 71 -11.2 -3.30124 | overlap 1977129 GTCATCCACCAGCAC GGCGCCGGCCAT GATC ATGGCCTGGGCC TTCTGCCGGGTGGGG TERM 3099 1977152 - 1977162 + g 71 -8.2 -4.07568 | overlap 1977129 CCTTCTGCCGGGTGG GGGC CAG GCCC TTTTCCACCAGCAGC TERM 3100 1977174 - 1977188 + g 86 -5.6 -5.08824 | overlap 1977176 GCCCTTTTCCACCAG CAGCTG GTC CAGCCG TTTTTTAACTACAGG Dole_1662 1979175 - 1977295 - | deoxyxylulose-5-phosphate synthase TERM 3101 1978148 - 1978170 + g 86 -9 -4.57073 | overlap 1978150 TCGGGCATGGCAGCG GTCACGGCCA CGA TGGCCGGGTC TTTTTCCGCCAGCTC TERM 3102 1978150 - 1978168 + g 77 -10.2 -3.90048 | overlap 1978148 GGGCATGGCAGCGGT CACGGCCA CGA TGGCCGGG TCTTTTTCCGCCAGC TERM 3103 1978627 - 1978609 - G 72 -4.4 -4.56597 | GGTGCGGCTTAAAAA CGAGGAGA GGG CCCCCACG TTTTGAGATATGGAC Dole_1663 1980073 - 1979186 - | polyprenyl synthetase TERM 3104 1979992 - 1979980 - G 80 -4.7 -5.02074 | overlap 1979981 1979982 GCATGGCGGAAAAAA GCCGG CCC CCGGG AACGCAGTCAGCAAG Dole_1664 1980305 - 1980060 - | exodeoxyribonuclease VII, small subunit TERM 3105 1980369 - 1980393 + r 70 -10 -3.17714 | overlap 1980372 GCATTCACTCGTCAC TGCGGCGTAC AACCA GTACGCCTCA TTCCTCGGGATTTGC TERM 3106 1980372 - 1980390 + r 71 -10.3 -2.78395 | overlap 1980369 TTCACTCGTCACTGC GGCGTAC AACCA GTACGCC TCATTCCTCGGGATT Dole_1665 1981832 - 1980486 - | exodeoxyribonuclease VII, large subunit TERM 3107 1980550 - 1980562 + g 95 -6.9 -5.52986 | overlap 1980551 AATGCGTCTCCCGGA TCGGC CTG GCCGG TTTTTTTAATGACCT TERM 3108 1981004 - 1981016 + g 84 -2.6 -5.40072 | GCAGGTTTCGGCAGT GGGC CAGGA GCTC TTTTTTTACCGGCAC TERM 3109 1982386 - 1982373 - g 75 -9.5 -3.89346 | CTGGGAGCCCATAAA GCCGC CATG GCGGC CAATATGGCAACGGC Dole_1666 1982046 - 1982552 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 3110 1983649 - 1983621 - g 72 -5.1 -4.56597 | overlap 1983623 CCTTCCGGGGAAAAA CCGTCACCGGCCT CAG ACGGCGATGCCGG TGAATACTGGAACAG TERM 3111 1983998 - 1983969 - g 71 -7.1 -4.11773 | AAAGATTTTGCAAAA GCCGATCAGCTTC GCAA GCAACTGACCGAC CTTAACGTGGTGCTT Dole_1667 1982616 - 1984055 + | cysteinyl-tRNA synthetase TERM 3112 1984933 - 1984949 + G 70 -3.6 -4.58424 | TTGTCCGACTGATTA CCCGGA TCGCT TCCCGG TTTTCTATCGTGGTG TERM 3113 1985023 - 1984974 - g 87 -9.8 -4.56597 | gap 2, opp_overlap 1984984, overlap 1984975 1984976 GTGGTGTCTGAAAAA GCGGCGGCCCAGGCC-GTGC-CCC TTGT GGGCGCGCTGGGCGGGGCCGCCAT CAACACCGTGTTCAT TERM 3114 1985022 - 1984975 - g 83 -13.3 -3.33744 | gap 2, opp_overlap 1984984, overlap 1984974 1984976 TGGTGTCTGAAAAAG CGGCGGCCCAGGCC-GTGC-CCC TTGT GGGCGCGCTGGGCGGGGCCGCCA TCAACACCGTGTTCA TERM 3115 1985021 - 1984976 - g 78 -14.6 -2.60032 | gap 2, opp_overlap 1984984, overlap 1984975 1984974 GGTGTCTGAAAAAGC GGCGGCCCAGGCC-GTGC-CCC TTGT GGGCGCGCTGGGCGGGGCCGCC ATCAACACCGTGTTC Dole_1668 1984359 - 1985138 + | hypothetical protein Dole_1669 1985493 - 1986101 + | putative GAF sensor protein TERM 3116 1986137 - 1986168 + F 100 -18.8 -5.75342 | gap 1, overlap 1986153 CGCCCATCACGTGAA CCGGCCGTGC-CCTG TTT CAGGCGCATGGCCGG TTTTTTTTCGGCAGC Dole_1670 1986299 - 1986745 + | BLUF domain-containing protein TERM 3117 1987068 - 1987050 - f 71 -4.5 -4.48987 | CTTGCATAATGAAAA GCAGCAC GGTCT GTGATGC ACGGGCCAGACACAA Dole_1671 1987119 - 1987769 + | hypothetical protein Dole_1672 1989633 - 1987807 - | AMP-dependent synthetase and ligase TERM 3118 1989375 - 1989385 + g 87 -6.8 -5.00616 | opp_overlap 1989374 TGTGAAACATGAAGG CGAC CTT GTCG TTTTTTCCAACGCCC TERM 3119 1989416 - 1989444 + g 76 -12.4 -3.3941 | overlap 1989417 GCGGCGATCAATGCG TTGGCCAGCCGG TTGAC CCGGCTGCCCAG TTCCTTCCATGTGGT TERM 3120 1989417 - 1989443 + g 74 -13.7 -2.63164 | overlap 1989416 CGGCGATCAATGCGT TGGCCAGCCGG TTGAC CCGGCTGCCCA GTTCCTTCCATGTGG TERM 3121 1990087 - 1990110 + G 76 -4.5 -4.87133 | GAATCCGACACCCTT CTGGTGCTC TCCGAT GAGAACCGG TTTTATTTGAGCGGT TERM 3122 1990393 - 1990375 - g 72 -6 -4.34402 | CTTCGCATATCAAAA GCCCTT GAAGAAA AAGGGC TGAAGGTTTCTTTTA Dole_1673 1990000 - 1991145 + | peptidase M24 TERM 3123 1991561 - 1991504 - g 100 -11.9 -4.63527 | gap 1, overlap 1991506 GGACGAGGTGAAAAA GCTGCTGGCCGCGCCCGACACCACCACG GCC CGTGGC-ATGCGGGACGCGGCCATGATC GAACTGATGTATGCC TERM 3124 1991559 - 1991506 - g 71 -13.1 -2.62098 | gap 1, overlap 1991504 ACGAGGTGAAAAAGC TGCTGGCCGCGCCCGACACCACCACG GCC CGTGGC-ATGCGGGACGCGGCCATGA TCGAACTGATGTATG Dole_1674 1991142 - 1992035 + | tyrosine recombinase XerD TERM 3125 1992342 - 1992314 - g 83 -5.7 -4.99435 | opp_overlap 1992331, overlap 1992316 1992330 1992331 TGGAACAATGAAAAA GGGGCGGCGCCGG AAA CCGGCGTGGACGC CGTCTCTGTCGCCCT TERM 3126 1992407 - 1992430 + G 70 -12.4 -2.73529 | opp_overlap 1992421, overlap 1992404 1992401 GTCAACGGCTGCCTG GGCGTGGCCA ATCA TGGCCAGGCC TGCATTTCTATCGGA TERM 3127 1992923 - 1992942 + G 84 -2.7 -5.40072 | GTGGCAAAGGTCTCC CGGGTGG AGGTGG CGGCCCG TTTTTTTGCCCCGCC TERM 3128 1992979 - 1992968 - g 75 -5.8 -4.56597 | opp_overlap 1992967 1992968, overlap 1992970 CCGCCCCCTGAAAAA CTGG TGGC CCAG CTTCTGGACCAGGGA TERM 3129 1993208 - 1993218 + G 74 -8.2 -4.13767 | overlap 1993206 1993210 GCCACGCCGGAGTCG GCGG CCG CCGC TTTTGCCATGGGCGC TERM 3130 1993850 - 1993867 + G 75 -10.5 -3.72576 | CAGGGCGTGGATCTG CCGGTGG AAGC CCGCCGG TTTGCTCCCACGCCC Dole_1675 1992248 - 1993921 + | PfaD family protein TERM 3131 1994477 - 1994497 + G 75 -9.6 -3.80625 | CAGGAGCTGGTGGTT CCCCTGGC CTCGC GCCTGGGG TTTCCCTTCTGGAAA TERM 3132 1995407 - 1995392 - g 85 -2.4 -5.60993 | overlap 1995394 1995396 CTTTCCACAAAAAAA CACCCC CGCC GGGCCG GCTTGAGCTCATTTG TERM 3133 1995414 - 1995394 - g 70 -4.5 -4.45201 | overlap 1995392 1995396 TTCCACAAAAAAACA CCCCCGCCG GGC CGGCTTGAG CTCATTTGGTTTCGG TERM 3134 1995751 - 1995721 - g 95 -13.3 -4.08216 | gap 1, overlap 1995693 1995722 TGACCTTCTGCAAAA GGCCATGGCCGCCG TCAC CGGCGGCGATG-CC GCGGCGGCGGATGGC TERM 3135 1995751 - 1995722 - g 79 -13.5 -3.04715 | overlap 1995693 1995721 GACCTTCTGCAAAAG GCCATGGCCGCCG TCAC CGGCGGCGATGCC GCGGCGGCGGATGGC TERM 3136 1996574 - 1996560 - g 72 -8.6 -3.86897 | GTGATCCCGCAGAAA CCAGAA AGA TTCTGG GCAATCAACTGCTCA TERM 3137 1996923 - 1996901 - g 76 -3.2 -4.87291 | overlap 1996902 1996903 TATCGCAAGGAAAAA CCGGCCCGCC CCA AACGGGCCCC CATGGTTCAGAAAAC TERM 3138 1998708 - 1998687 - g 85 -10.9 -4.07568 | gap 1, opp_overlap 1998669, overlap 1998688 CCGGGCTGGTGAAAA CCGCGGCCAT TGA ATGGCCG-GG CGTGACCTGCCGGGT TERM 3139 1999099 - 1999118 + G 70 -4.2 -4.56597 | gap 1, opp_overlap 1999092 CGGCAAAACCGCCAC CCCGG-CTG AAG TGGACCGGG TTTTTAAAAAGCACA TERM 3140 1999368 - 1999385 + G 80 -10.5 -4.07568 | TTGATACCAAGGTGG CCGGGGC AAAG GCCCTGG TTTTGGCGGCGGACA TERM 3141 2000019 - 1999992 - g 72 -9.8 -3.74747 | gap 1, overlap 1999981 TCAAGGTTGATGAAA CCGGCC-GCACCG TTA CAGTGCTGGCTGG AAAGCCGATCAAAAG TERM 3142 2000402 - 2000433 + G 74 -7.3 -4.26079 | gap 1, opp_overlap 2000405 2000407, overlap 2000396 2000405 ATTGTGTGGTGCCAC GA-ACAGGCGGGCA TGGTC TGCCTGCCGGTCTC TTTTAAATCCTTTCG Dole_1676 1994060 - 2000629 + | polyketide-type polyunsaturated fatty acid synthase, PfaA TERM 3143 2002313 - 2002331 + G 74 -6.6 -4.42653 | AACATTATTTAGGCC GTGTTCCG GAG CGGGGCGC TTTTATCGATGAGGT TERM 3144 2002491 - 2002474 - g 72 -4.8 -4.56597 | gap 1, opp_overlap 2002488, overlap 2002475 2002476 CCCCTGCGGGAAAAA CG-GCCC CGCAT GGGCGCG GTCATGGGCATGGAC TERM 3145 2003402 - 2003415 + G 80 -2.4 -5.21709 | overlap 2003389 CACCGGTAGACGACC GGTT TAAAAC AACC TTTTTTCATATGCCG TERM 3146 2003615 - 2003627 + G 80 -10.5 -4.08042 | opp_overlap 2003580, overlap 2003617 CTCTGGGGCTGTACC CCGGC CGG GCCGG TCTTTTTGTGGTGGA TERM 3147 2003617 - 2003629 + G 87 -6.9 -4.91109 | opp_overlap 2003580, overlap 2003615 CTGGGGCTGTACCCC GGCCG GGC CGGTC TTTTTGTGGTGGAGG TERM 3148 2003741 - 2003716 - g 76 -4.5 -4.7497 | opp_overlap 2003733 2003734 2003736, overlap 2003717 2003733 2003734 GGCATCGATGAAAAA GGGGCCGGCAT CGAA AAGGCGGCCCG GGGCTGGTACGCGGC TERM 3149 2003736 - 2003764 + G 83 -15.2 -2.74605 | opp_overlap 2003717 2003716 2003734 2003733, overlap 2003734 2003733 CGGCATCGAAAAGGC GGCCCGGGGCTG GTACG CGGCCCAGGGCC TGGATTTTGACCGGG TERM 3150 2004435 - 2004469 + G 88 -11.4 -4.22927 | opp_overlap 2004447 CAACCGGGGCACCGA CCAGGTCAAAAAGGCG ATC CGCCATTTTCCCCTGG TTTATCTGTTGATCG TERM 3151 2004457 - 2004447 - g 83 -8.2 -4.63527 | opp_overlap 2004435 CGACCAGGTCAAAAA GGCG ATC CGCC ATTTTCCCCTGGTTT TERM 3152 2004722 - 2004748 + G 72 -9.3 -3.65084 | opp_overlap 2004721 2004720, overlap 2004712 2004723 2004742 TGACCTCCGAGAACG CGGCCCGGTCC ATCAC GGACCAGGCCC TTTACGGGTTTGATT TERM 3153 2004723 - 2004747 + G 73 -12.8 -2.78327 | opp_overlap 2004721 2004720, overlap 2004722 2004712 2004742 GACCTCCGAGAACGC GGCCCGGTCC ATCAC GGACCAGGCC CTTTACGGGTTTGAT TERM 3154 2005110 - 2005148 + G 93 -11.8 -4.36914 | overlap 2005112 GGTCCGGCTGCCAGC GGCGTATGCGCCTG CCGGTCAAGCC CAGGCGCATACGAC TTTTATCAGCGCACC TERM 3155 2005112 - 2005146 + G 71 -13 -2.52946 | overlap 2005110 TCCGGCTGCCAGCGG CGTATGCGCCTG CCGGTCAAGCC CAGGCGCATACG ACTTTTATCAGCGCA TERM 3156 2005757 - 2005773 + G 86 -5.8 -5.1244 | GTATCTCCATCGAGG CGGGTC AGGCC GACCTG TTTTTATGTTCCTAC TERM 3157 2006162 - 2006188 + G 70 -3.7 -4.57569 | gap 1 ATGCCTTGCGGGAGG GCAGGCTTGAAA AATG TTTCG-GCCCGC TTTTTGCCGGAATCA TERM 3158 2006840 - 2006855 + G 78 -6 -4.67552 | opp_overlap 2006824, overlap 2006839 GCCGGATCATCGCAC GGCTGC CCGG GCCGCC TTATTTTTTCATGGA Dole_1677 2000749 - 2007879 + | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ Dole_1678 2009780 - 2007903 - | putative PAS/PAC sensor protein TERM 3159 2008219 - 2008241 + g 83 -9.2 -4.4078 | opp_overlap 2008217 TGGTGGTAGCAGATC TCCTTTCCCA GGG TGAGAAAGGA TTTTCCTTCCACCCG TERM 3160 2009055 - 2009070 + g 72 -4.6 -4.64676 | overlap 2009056 CTTGATCATCTGAAG GGTGCG CTTG CGCACA TTTTCTTCCAGCTCA TERM 3161 2009324 - 2009313 - G 75 -3.6 -4.82901 | GCTGGCCCACAAAAA CCGC AATC GCAG GATGGTGTAGGCAAA TERM 3162 2009514 - 2009496 - G 78 -6 -4.5787 | GTAGGAAAAAAAATA TCCCAG AATAAAA CTGGGA ATCAGAATACCGTAC TERM 3163 2009831 - 2009844 + H 87 -5.3 -5.36441 | GTAATCGACTTACCG TGGTT TGAC AACCA TTTTTTCTGTAAAGC TERM 3164 2010155 - 2010145 - g 72 -4.6 -4.56597 | CGGTGTGGCGAAAAA CAGG ATG CCCG GGCTGGGTGACACGG Dole_1679 2010011 - 2010238 + | FmdB family regulatory protein TERM 3165 2010424 - 2010401 - g 87 -8.1 -4.77157 | overlap 2010402 GGAAGGGATGAAAAA GGCGGTTTC CGCGTC GACACCGCC GACCTGGTGGGCCGA Dole_1680 2010290 - 2010517 + | hypothetical protein Dole_1681 2010964 - 2010533 - | hypothetical protein TERM 3166 2010704 - 2010724 + g 100 -11.2 -5.76949 | TAACGGGCCGGGCAC CGGGTCAA CGGGC TTGACCCG TTTTTTTTCCGGATA TERM 3167 2010908 - 2010938 + g 72 -9.7 -3.64716 | gap 1, overlap 2010905 2010906 GGCCAGGCCCGGCCG CAGGGCCGTAC-CC GGGG GGTGTTTGGCCCTG TATTTTCCCGCGTCC Dole_1682 2013235 - 2010986 - | methyl-accepting chemotaxis sensory transducer TERM 3168 2011466 - 2011481 + g 73 -3.2 -4.72846 | GATAGTGGCATTTAA GGCCAG CAGG TTGGTC TTTTTGGATATCTCG TERM 3169 2012798 - 2012788 - G 78 -4 -4.91109 | GGGTCAGCAGAAAAA CAAA GTC TTTG TCAATGATTTCCCGT TERM 3170 2013071 - 2013056 - G 77 -10.4 -3.87373 | opp_overlap 2013056 2013054 CACATCGGTGATAAA CAGGGC ACCG GCCCTG TCTTCCATGTATTCC TERM 3171 2013312 - 2013328 + r 71 -7.2 -3.99013 | opp_overlap 2013311 AGTGGAACAATAATG CCGGGC GTCAG GCCTGG TTTATGAAGTTTTTG Dole_1683 2014233 - 2013319 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 3172 2013367 - 2013386 + g 80 -2 -5.24531 | GGCCGGATCCGGGTA CCGGTAAA AGCC TTCTCCGG TTTTTTCTCCCAGCT TERM 3173 2013970 - 2014027 + g 75 -12 -3.23393 | gap 3, opp_overlap 2013961, overlap 2013971 2014016 GATAAAGTCCGCATT CGCCGCGGCCTGCTCGCTGTCCGGGGTCA GGG TGACCCTTGCCA-TG-GC-GGCCGCGGCC TCTTCTCCGGTGAGG TERM 3174 2013971 - 2014026 + g 81 -15.5 -2.53822 | gap 3, opp_overlap 2013961, overlap 2013970 2014016 ATAAAGTCCGCATTC GCCGCGGCCTGCTCGCTGTCCGGGGTCA GGG TGACCCTTGCCA-TG-GC-GGCCGCGGC CTCTTCTCCGGTGAG Dole_1684 2014625 - 2014996 + | hypothetical protein TERM 3175 2015017 - 2015062 + T 74 -3.1 -5.11881 | gap 1, opp_overlap 2015025, overlap 2015033 2015035 ATGAGGGGCAGGGAC CGGGCAAAGG-CAGCCTCGCCG GTG TGGCCCGTCGGATTTTTGCCCG TTATTTTTTTTATTT Dole_1685 2016346 - 2015072 - | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 3176 2015648 - 2015633 - G 83 -4.6 -5.06451 | overlap 2015636 CACCAGGGGAAAAAA CGAGGC GGAC GTCTCG GCCATGCTGTAGGGT TERM 3177 2016181 - 2016198 + g 85 -3.3 -5.40072 | gap 1, opp_overlap 2016179 GCTCGATGGGAAACC CGGCGCAG GTC CAG-GCCG TTTTTTTCCACGGCA Dole_1686 2017518 - 2016406 - | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 3178 2016684 - 2016694 + g 70 -4.6 -4.4261 | AATACCGGGCCAGAG CCTC AAA GGGG TTTTCCTCTTCAGGA TERM 3179 2016840 - 2016859 + g 74 -2.7 -4.93365 | overlap 2016843 2016846 GCACTTTTATTTTAT CTGCGGG AAAAGG CCCCCGG TTTTTCATTGTCGCA TERM 3180 2017238 - 2017253 + g 78 -6 -4.56775 | TGAGCGATAACGATC CCGGCC CACT GACCGG TTTTTGCCAGGGCCT TERM 3181 2017628 - 2017584 - H 76 -7 -4.34008 | gap 1 GATCAAGGAAAACAA GGGCTGACACG-GAGGCGTAC TGCG GTACGCCGCACAAGGAAGCCC GAAGTTTGACGCAGA Dole_1687 2018081 - 2018626 + | hypothetical protein Dole_1688 2019543 - 2018722 - | nitroreductase Dole_1689 2021853 - 2019589 - | hypothetical protein TERM 3182 2020069 - 2020042 - G 70 -4 -4.56597 | overlap 2020043 CCTGTCCTGGAAAAA CCGGTACGCGTC TTCG GACTCATCCCGA ATCCAGCCGAGGATT Dole_1690 2024137 - 2021876 - | hypothetical protein TERM 3183 2022418 - 2022431 + g 77 -8.1 -4.38129 | CGGTAATCGGCTCTC CGCTC ATCA GAGCG TTTTCATCCTTCTGT TERM 3184 2024170 - 2024182 + H 73 -3.3 -4.9448 | overlap 2024163 TTTCATGACGTTTCA CTGTG AAA CACTG TTTTGTTTCATCAAT TERM 3185 2024460 - 2024486 + G 75 -12.2 -3.22298 | opp_overlap 2024453 2024462, overlap 2024462 CAGCGAAACGGTCAG AACGCCCAGACC GCG GGCCTGGGCGTG TTCCTGCTGCCTGCG TERM 3186 2024462 - 2024484 + G 86 -14.8 -3.17527 | opp_overlap 2024453 2024462, overlap 2024460 GCGAAACGGTCAGAA CGCCCAGACC GCG GGCCTGGGCG TGTTCCTGCTGCCTG TERM 3187 2024484 - 2024462 - g 90 -17 -3.3506 | opp_overlap 2024462 2024460, overlap 2024453 GCGAAACGGTCAGAA CGCCCAGACC GCG GGCCTGGGCG TGTTCCTGCTGCCTG Dole_1691 2024295 - 2024573 + | hypothetical protein TERM 3188 2024880 - 2024892 + G 76 -4.9 -4.7373 | TCGGCCGGACCGGGA TTTGT GGA ACAAA TTTTTCATGAACTGA TERM 3189 2024947 - 2024972 + G 71 -12.5 -2.52623 | overlap 2024909 2024946 2024945 TGGGCGGGACCCTGC CGGCCCCGCGT CTGT ATGCGGAGCCG ATCTTCTGCCCCGGC Dole_1692 2024634 - 2025011 + | hypothetical protein Dole_1693 2025452 - 2025021 - | hypothetical protein TERM 3190 2025234 - 2025255 + g 74 -11.5 -3.55444 | GGGAGAATCGCCGCC CCTGCCGGA CTGA TCCGGCCGG TTTACAAGATCGCCG TERM 3191 2025398 - 2025376 - G 70 -4 -4.56597 | overlap 2025386 TCCGCCGGCGAAAAA CCGCAAACCA GCA TTGCCCGCGG ACCATATAGACTGCG TERM 3192 2025684 - 2025703 + H 100 -5.6 -5.61881 | overlap 2025685 CTCAAAAAAATTTTC GCGGTGCC CGGC GGCATCGA TTTTTATTTTTACGG TERM 3193 2025685 - 2025702 + H 76 -9.1 -3.95502 | overlap 2025684 TCAAAAAAATTTTCG CGGTGCC CGGC GGCATCG ATTTTTATTTTTACG TERM 3194 2027386 - 2027376 - g 74 -2.4 -4.93365 | CTCGATAATGAAAAA GTGC CCG GCCC CATTGAAAAGCTGTT TERM 3195 2027609 - 2027577 - g 79 -7.5 -4.64144 | overlap 2027567 AAGAACCTGGAAAAA GGGTTTGCCAAGTGG GTG CCCCTGGGCATTCCC ATTGCACCGCTCATG TERM 3196 2027689 - 2027671 - g 76 -3 -5.00616 | opp_overlap 2027682 TGGTCCTGGAAAAAA GCCTGG TGGATGT CCGGGC CCCGGCCTTTCAGGC Dole_1694 2025756 - 2027864 + | phosphofructokinase TERM 3197 2028436 - 2028422 - g 86 -5.7 -5.03314 | TGTATCTGCAAAAAA GAGCA GCACA TGCTC GACAACGGGTGCGAC Dole_1695 2027894 - 2028976 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3198 2029041 - 2029027 - f 85 -2.7 -5.53991 | opp_overlap 2029027 2029028, overlap 2029028 CAGGCAGTAAAAAAA GCGCG GTCAA CGCGG TTCTTACGACGCCCC TERM 3199 2029490 - 2029513 + G 80 -10.2 -4.06719 | overlap 2029492 2029510 TCGGTACGATGTACC CCGCTCTCCC TGAA GGGGGAGCTG TTTCTGCTGGTTTTT TERM 3200 2029492 - 2029511 + G 74 -11.4 -3.60538 | overlap 2029490 2029510 GGTACGATGTACCCC GCTCTCCC TGAA GGGGGAGC TGTTTCTGCTGGTTT Dole_1696 2029076 - 2030218 + | histidine kinase TERM 3201 2030349 - 2030382 + F 72 -11 -2.62667 | overlap 2030348 2030346 CGACAATGCTTCTCC CCGGGAGC-GCCGCAC CCAA GTGCGGCTGC-CCCGA ATATTTCACCATTGA Dole_1697 2030458 - 2030706 + | AbrB family transcriptional regulator TERM 3202 2030816 - 2030804 - g 70 -4.7 -4.44046 | opp_overlap 2030804, overlap 2030800 2030806 GGCAGCCGAAACAAA CCGGG AAT CCCTG TTTATTCCCCTGCTG Dole_1698 2030703 - 2031104 + | PilT domain-containing protein TERM 3203 2031124 - 2031101 - f 73 -2.4 -5.055 | gap 1, overlap 2031106 CGAACTGGTAAAAAA GTAAAGGGCCT GTA AAGCCCTGT-C AATCAACAGACGCGC TERM 3204 2031120 - 2031106 - f 78 -7.8 -4.42765 | overlap 2031101 TGGTAAAAAAGTAAA GGGCCT GTA AAGCCC TGTCAATCAACAGAC TERM 3205 2031452 - 2031431 - f 73 -9.5 -3.30006 | overlap 2031436 ATGAATGCAGAGCAA GATAACCTC GACC GAGGTTACC GAAAAGAGGTTTTTT TERM 3206 2031624 - 2031600 - gf 76 -4.9 -4.74801 | overlap 2031604 CAAGGCCATGAAAAA GCGACTGCTGG CCG CCAAAAACCGC CAGGAGAATATCTCC Dole_1699 2031469 - 2031672 + | hypothetical protein TERM 3207 2031776 - 2031795 + GT 71 -9.2 -3.55563 | CGCGACCCCTTTCAT GGTGCCGG CAAA CCGGAACC TTTAAAACATGAGCT Dole_1700 2031644 - 2031910 + | addiction module antitoxin TERM 3208 2031953 - 2032000 + T 100 -18.8 -4.14874 | opp_overlap 2031956, overlap 2031955 2031956 2031964 2031998 ACCCGGTGGTGGCAA AAAGCTTAAAAGCACCTTTTGA TGCC TCAAAAGGTGCTTTTAAGCCTG TTTTAACGGTGTTAT TERM 3209 2031955 - 2031998 + T 100 -21.4 -3.66658 | opp_overlap 2031956, overlap 2031953 2031956 2031964 CCGGTGGTGGCAAAA AGCTTAAAAGCACCTTTTGA TGCC TCAAAAGGTGCTTTTAAGCC TGTTTTAACGGTGTT TERM 3210 2031997 - 2031956 - T 100 -24.9 -4.56597 | opp_overlap 2031956 2031955 2031953 2031964 CGGTGGTGGCAAAAA GCTTAAAAGCACCTTTTGA TGCC TCAAAAGGTGCTTTTAAGC CTGTTTTAACGGTGT TERM 3211 2031956 - 2031997 + T 100 -24.9 -2.79272 | opp_overlap 2031956, overlap 2031955 2031953 2031964 CGGTGGTGGCAAAAA GCTTAAAAGCACCTTTTGA TGCC TCAAAAGGTGCTTTTAAGC CTGTTTTAACGGTGT TERM 3212 2031964 - 2031989 + T 100 -14.9 -4.16146 | opp_overlap 2031956, overlap 2031956 2031955 2031953 GCAAAAAGCTTAAAA GCACCTTTTGA TGCC TCAAAAGGTGC TTTTAAGCCTGTTTT TERM 3213 2032100 - 2032082 - T 73 -10.2 -3.17075 | GCGGTTGGAATTCAA GGCGCTTC CCG GGAGCGCC GCACCCCAGTGCGGC Dole_1701 2032858 - 2032334 - | hypothetical protein Dole_1702 2033513 - 2032953 - | hypothetical protein Dole_1703 2039963 - 2033679 - | YD repeat-/RHS repeat-containing protein TERM 3214 2033925 - 2033937 + g 81 -3.3 -5.26918 | overlap 2033918 2033917 TCCGCCTTCATATGT GCCTT CAT ATGGC TTTTTTCTCGCATAT TERM 3215 2036985 - 2036967 - G 72 -6.7 -4.3586 | gap 1, opp_overlap 2036970, overlap 2036970 GTAGGTATACGAAAA CATCGGGC TTGT GCCCG-TG TCATTATACAGGGTT TERM 3216 2037106 - 2037121 + g 80 -4.6 -4.93296 | overlap 2037099 2037108 CGCCATGTCCAGCCA CCCTGG TTTT CCAGTG TTTTTGTCGTGGTGA TERM 3217 2037210 - 2037198 - G 73 -3.3 -4.77986 | opp_overlap 2037202 GGAAAGATCGAAAAA CCCGC TTG ACAGG GTGTCCTGATAGGTT TERM 3218 2037946 - 2037910 - G 86 -5.7 -5.0538 | overlap 2037911 2037942 TCCGACCGGAAAAAA TCGGCCTTGCCGTCGCC GTC GATATCGGCAAACCCGA AACCGGCACGGTTGT TERM 3219 2038032 - 2038005 - G 78 -9 -4.15044 | GCTTTCCTGAACAAA CCCGACGTCCGG GTCA CCGGAAGACAGG GCAATGCGGATGGAG TERM 3220 2038512 - 2038492 - G 70 -4 -4.59773 | gap 2 CGGCAGTTGGAAAAA CGACGGCCGG ATT CCGG--GTCG AAGCCGAAAGAACCA Dole_1704 2045310 - 2040043 - | polymorphic outer membrane protein TERM 3221 2045343 - 2045357 + H 73 -8.6 -3.85698 | opp_overlap 2045323 2045343 2045339 2045329, overlap 2045331 AGACCATGGAATATA TGGCTT ATA AAGCCA TTTATCGCAGGCCCA TERM 3222 2045954 - 2045977 + G 78 -9.5 -4.01888 | GAGGTGGTGTGTGCC GGCGTGGGC AAGGGG GCCGACGCC TTTATGGTCTCCCGT TERM 3223 2046474 - 2046486 + G 90 -3.4 -5.75945 | TGTTCGGCGATACCG TGGA GTCGA TCCA TTTTTTTTCCCCGGT TERM 3224 2049303 - 2049288 - g 72 -4.6 -4.62069 | opp_overlap 2049287, overlap 2049289 CGGTTACGGTAAAAA TCGTCC CTCC GGACGG CGTTTTCATCACGTT Dole_1705 2045873 - 2049397 + | transcription-repair coupling factor TERM 3225 2049504 - 2049560 + G 80 -10.8 -3.96624 | overlap 2049507 CTGCTTTTTGGAGCG TTTCTGGCGTTGTGCTTCGGCGGATG TGATT CAACCGGCAAAACACAACGCCAGTCA TTTCTGCTCCGCATC TERM 3226 2049507 - 2049557 + G 89 -16.9 -3.04122 | overlap 2049504 CTTTTTGGAGCGTTT CTGGCGTTGTGCTTCGGCGGATG TGATT CAACCGGCAAAACACAACGCCAG TCATTTCTGCTCCGC TERM 3227 2049788 - 2049777 - g 70 -3.6 -4.59773 | GCCGAGCTTGAAAAA GCGG TTGC CCAC ATCACCGAGGATTAC TERM 3228 2050043 - 2050031 - g 74 -6.9 -4.3208 | opp_overlap 2050031 GCTGAGAAGGGAAAA GGCCC AGA AGGCC TATGTGGACTGGATG Dole_1706 2049426 - 2050124 + | SurA domain-containing protein TERM 3229 2050839 - 2050875 + G 77 -2.4 -5.055 | gap 2 TGGCCAGCCAGTACT CCCA-GTCCTC-CTTT GCGGAAA AAGGAGGGGACCTGGG TTTTTTCGCGCTTGA Dole_1707 2050187 - 2051137 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 3230 2051142 - 2051155 + F 73 -2.3 -5.00884 | opp_overlap 2051142 TGGTGTTATGAGAAC CGCTG TCGC CATCG TTTTTTCAAGGAAGT Dole_1708 2051187 - 2051945 + | hypothetical protein TERM 3231 2052159 - 2052128 - g 70 -3.7 -4.59773 | gap 1, opp_overlap 2052130, overlap 2052129 2052130 2052139 GGCCATGGCCAAAAA CGCCCGGAAAAGCA AAAAA CGCTTTGCCG-GCA TTCTTGAACCTTTCT Dole_1709 2052012 - 2052794 + | DNA repair protein RecO TERM 3232 2053889 - 2053867 - g 83 -7.6 -4.57569 | opp_overlap 2053877 GTAGGGTTTTAAAAA CAACCGGCGA CGC CCGCCTGCTG GATACCCGTATCGAC TERM 3233 2053877 - 2053914 + G 72 -5.6 -4.46212 | opp_overlap 2053867 AAAAACAACCGGCGA CGCCC-GCCTGCTGGATA CCCG TATCGACC-GGCAGGGCG TTTTATGGTAGCCGG Dole_1710 2052873 - 2053925 + | GHMP kinase TERM 3234 2054068 - 2054049 - f 100 -10.6 -4.56775 | overlap 2054035 ACGGTTTTTTAAAAA GCGGCTCG TTTG CGGGCCGC CGGAATGAACGGAAC Dole_1711 2054073 - 2054975 + | glycyl-tRNA synthetase subunit alpha TERM 3235 2056083 - 2056062 - g 74 -2.2 -5.00616 | gap 1, overlap 2056063 2056064 CCCTGCTTGAAAAAA CGCAGC-GC ATTGA GCAGCTGGG CCTGATGCTGGCCGG TERM 3236 2056495 - 2056509 + G 71 -7 -4.20531 | opp_overlap 2056491 TTCCCGAATCATTCA GGCGGC CAT GGCGCC TTTTGCGTCCGTGTC TERM 3237 2056783 - 2056763 - g 91 -7.5 -5.2112 | overlap 2056765 AACATTATCAAAAAA GCCGATCCC AAA GAGATCGCC GGAGAGGTGAACAGT TERM 3238 2057010 - 2057040 + G 79 -6.8 -4.59109 | overlap 2057011 2057018 TGGCCCTGCTGTCTC GCGTCAACTCCCTT TTC AAGGGATTTGCCGA TTTTTCCGCGCTCTC Dole_1712 2054972 - 2057080 + | glycyl-tRNA synthetase, beta subunit Dole_1713 2057130 - 2057384 + | hypothetical protein TERM 3239 2058104 - 2058123 + G 87 -4.2 -5.40072 | overlap 2058105 2058119 TCGGATGAGCTGTTT TCCGGC ACATGGAA GCCGGG TTTTTTTGAGCCCCG Dole_1714 2057438 - 2058199 + | purine phosphorylase family 1 TERM 3240 2058300 - 2058279 - g 70 -12.3 -2.82519 | TTATTACATCAAGGA CGCGCCTGA AATT TCAGACGCG GAATATGACCGCCTG TERM 3241 2059008 - 2059019 + G 72 -4.4 -4.63486 | CATAAAAGGTGTTAT CGAT TTTT ATCG TTTTCTTGAAGGCAT Dole_1715 2058184 - 2060232 + | DNA ligase, NAD-dependent TERM 3242 2060277 - 2060260 - g 77 -2.5 -5.13741 | opp_overlap 2060262, overlap 2060262 TCAATGGAAGAAAAA GTGCGCG TTCA CGCGATC ATTCAAGGCCGGGTG Dole_1716 2060248 - 2060529 + | acylphosphatase TERM 3243 2060610 - 2060575 - T 100 -22 -4.82901 | overlap 2060601 CGCGGGGCACAAAAA GATAGCGGGCTGCTCC GCGT GGAACAGCCCGCCATC AAGCGAGGAACGTCG Dole_1717 2060908 - 2060636 - | histone family protein DNA-binding protein TERM 3244 2061020 - 2061030 + r 100 -2.6 -6.34424 | TCAAAGATTCGCGCA TTTT TTC AAAA TTTTTTTTTTGCGAA TERM 3245 2061157 - 2061212 + r 85 -12 -3.35813 | gap 1, opp_overlap 2061146 2061155 2061176, overlap 2061128 2061160 2061176 GAGACCGGCAATATC CGGCGGGCCTC-TTCGCAAACCCTT AACCGGC AAGGGTTTGCGAAGGAAGGCCGTGG TTGCTTGAAATCAAA TERM 3246 2061160 - 2061209 + r 90 -14.5 -2.84574 | gap 1, opp_overlap 2061155 2061176, overlap 2061128 2061157 2061176 ACCGGCAATATCCGG CGGGCCTC-TTCGCAAACCCTT AACCGGC AAGGGTTTGCGAAGGAAGGCCG TGGTTGCTTGAAATC Dole_1718 2062392 - 2061247 - | signal recognition particle-docking protein FtsY Dole_1719 2066047 - 2062433 - | chromosome segregation protein SMC TERM 3247 2063410 - 2063423 + g 77 -8.1 -4.26019 | CATAGTGTTCCCTGA GCAGG GCCT CCTGC TTTTCAATGTCGTTG TERM 3248 2063528 - 2063549 + g 71 -7.3 -4.11216 | gap 1, overlap 2063529 CTGAAAACGTTTCAG C-CGGTCAAG GGT CTTGGCCGTG TTTTCAAGCTCCGCG TERM 3249 2063529 - 2063547 + g 78 -11 -3.65542 | overlap 2063528 TGAAAACGTTTCAGC CGGTCAAG GGT CTTGGCCG TGTTTTCAAGCTCCG TERM 3250 2063926 - 2063938 + g 93 -5.5 -5.48825 | GGACCACCGCCTCAA GAGCG GCC TGCTC TTTTTTTGCCTGGTC TERM 3251 2065396 - 2065406 + g 83 -8.2 -4.62069 | CCTGGTACTCCTTGT GGCG CAA CGCC TTTTTGGCCTGGCGG TERM 3252 2065504 - 2065516 + g 70 -4.1 -4.58236 | TGGCCCGAAGTTTGC GAAGG GCC TCTTC TTTTCGTGTTTTGTA TERM 3253 2065808 - 2065832 + g 77 -7.7 -4.4078 | overlap 2065810 GGCCAGCACCAGCGA GACCTCGGCCA TAT TGACCGGGGCC TTTTCATTGGAACCG TERM 3254 2066593 - 2066605 + H 85 -10.5 -4.10657 | opp_overlap 2066581 AAACCCTGAACCGCT GGGGC TTT GCCCC TTTTAAAACGTCTGA TERM 3255 2066924 - 2066913 - g 84 -2.2 -5.48825 | GACTACGCAAAAAAA GACG CCCG CATC AAAATATTTTCCGGT TERM 3256 2067031 - 2067060 + G 75 -5.7 -4.57569 | gap 1 GTGACGACCTGCTGG CCCCTACCG-CTCT TGA AGAGACGGTAAAGG TTTTTCAGGCCATCC Dole_1720 2066736 - 2067503 + | N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase Dole_1721 2067503 - 2068288 + | glycosyl transferase family protein Dole_1722 2069356 - 2068304 - | radical SAM domain-containing protein Dole_1723 2069665 - 2069384 - | hypothetical protein TERM 3257 2070252 - 2070234 - g 78 -3.1 -5.14965 | gap 1 ATGGTCACCAAAAAA GACCTCAC CTCC GTG-GGCC AGTTCATGTTCATGG TERM 3258 2070467 - 2070450 - g 83 -9.8 -4.37886 | GCAGTGGCCAGAAAA GGCGCC ATCATG GGCGCC CTGACCCTCTATCTT Dole_1724 2069832 - 2070539 + | hypothetical protein TERM 3259 2070591 - 2070570 - T 100 -11.5 -5.1417 | opp_overlap 2070570 CTACAAAAGCAAAAA GGGGATCGC CGTG GCGGTCCCC TTTTTTATTACACCT TERM 3260 2070570 - 2070591 + T 100 -13.7 -5.45652 | opp_overlap 2070570 CTACAAAAGCAAAAA GGGGATCGC CGTG GCGGTCCCC TTTTTTATTACACCT Dole_1725 2071027 - 2070605 - | class I peptide chain release factor TERM 3261 2070847 - 2070863 + g 70 -3.6 -4.56597 | overlap 2070838 TGATCCGCCGGCCCG CCAGCT TTATC AGCCGG TTTTTCACCGGCCCC Dole_1726 2072858 - 2071062 - | GTP-binding protein LepA Dole_1727 2073947 - 2072973 - | rhomboid family protein TERM 3262 2073539 - 2073513 - G 74 -10.9 -3.49482 | gap 1, overlap 2073511 GTAGAGGATGAAATA GGCGCCCATCAC CCCG GCGATGG-CGCC GCTGGCTCCCACCAC Dole_1728 2074818 - 2073982 - | nicotinate-nucleotide pyrophosphorylase TERM 3263 2074670 - 2074656 - G 79 -7 -4.57569 | overlap 2074657 CCAGGGTCTCAAAAA CCGCGG CCG CCGCGT TCAGGCCGGCGATCA Dole_1729 2077600 - 2074946 - | valyl-tRNA synthetase TERM 3264 2075323 - 2075342 + g 78 -3.5 -5.03314 | overlap 2075325 CCGTCTCATCCGCCA CATGGAC CACCAC GTCCAGG TTTTTTGAAGGTGGA TERM 3265 2075567 - 2075584 + g 83 -5.5 -4.93333 | overlap 2075570 AAGGGTGTCACGCAG CACGTGC CAGA GCACCTG TTTTGTCTTTTCCTT TERM 3266 2076462 - 2076478 + g 83 -7.9 -4.56597 | CGGGTCCGGCCCTGC GCCACCG CCT CGATGGC TTTTTCGGCCAGGGG TERM 3267 2076835 - 2076865 + g 70 -11.9 -2.78996 | gap 1, overlap 2076835 TCACCGGAATGGTCC GGCCGGTAAGGGGC AGCA GCACCTTA-CGGCC CTTTGCGTGGGCATA TERM 3268 2077261 - 2077304 + g 95 -7.2 -5.40072 | opp_overlap 2077260, overlap 2077262 CCCGGTCGATAAACG CCTGCCGGCCAAGGGCGTGG CGGT CCGTGCCTTCGGCCATCAGC TTTTTTTCCACCACG TERM 3269 2077262 - 2077303 + g 77 -10.7 -3.83561 | opp_overlap 2077260, overlap 2077261 CCGGTCGATAAACGC CTGCCGGCCAAGGGCGTGG CGGT CCGTGCCTTCGGCCATCAG CTTTTTTTCCACCAC Dole_1730 2077890 - 2077648 - | hypothetical protein TERM 3270 2077838 - 2077860 + g 100 -6.3 -5.82316 | opp_overlap 2077839, overlap 2077839 TATGTGCCAATAAAA AGGGGATTA TTCAC TAATCCCCC TTTTTTTTCAATAAT TERM 3271 2077839 - 2077859 + g 78 -9.8 -4.07763 | opp_overlap 2077839, overlap 2077838 ATGTGCCAATAAAAA GGGGATTA TTCAC TAATCCCC CTTTTTTTTCAATAA TERM 3272 2077859 - 2077839 - G 100 -9.8 -5.06816 | opp_overlap 2077838 2077839 ATGTGCCAATAAAAA GGGGATTA TTCAC TAATCCCC CTTTTTTTTCAATAA Dole_1731 2079890 - 2077905 - | ATPase TERM 3273 2079805 - 2079789 - G 80 -5.1 -5.00616 | GGTTTCGTCAAAAAA GTCCG GGATCTT CGGAC TGGCCTGTTTTTTCG TERM 3274 2080199 - 2080180 - g 87 -7.8 -4.84274 | CAACCACATCAAAAA CGTGCTTC GCAT GAAGCCCG GCGACGCAATATGGC Dole_1732 2080097 - 2080834 + | hypothetical protein TERM 3275 2081010 - 2080995 - f 82 -10.4 -3.85165 | CATGCTAAAGCCAAA CTCCGG GCGA CCGGAG GACGGAAAGCAACGG TERM 3276 2081053 - 2081039 - f 75 -7.8 -4.1891 | GGGTCTTAATATAAA GACAGC CGG GCTGCC ATGAAGATAAGGTAT TERM 3277 2081074 - 2081106 + F 100 -16.4 -5.45802 | gap 1, opp_overlap 2081068 2081092 2081093 GATAAGGTATTTCAA GCCGGGCTGTCTCTG AAAC CAG-GACAGTCCGGC TTTTTATTTTAGCGG Dole_1733 2081143 - 2083383 + | hypothetical protein TERM 3278 2083541 - 2083575 + T 91 -11.5 -4.09739 | gap 1, opp_overlap 2083547, overlap 2083542 2083547 2083570 2083571 TCCCTCGGCACCACC ACAAAAGGGTCGCGGC TTTT GCC-CGGCCCTTTTGC TTTTGGCAAAGTTCA TERM 3279 2083542 - 2083574 + T 91 -15 -3.05522 | gap 1, opp_overlap 2083547, overlap 2083541 2083547 2083570 2083571 CCCTCGGCACCACCA CAAAAGGGTCGCGGC TTTT GCC-CGGCCCTTTTG CTTTTGGCAAAGTTC TERM 3280 2083569 - 2083547 - T 77 -6.9 -4.4891 | gap 1, opp_overlap 2083547 2083542 2083541 GGCACCACCACAAAA GGGTCGCGGC TTTT GCC-CGGCCC TTTTGCTTTTGGCAA TERM 3281 2083547 - 2083569 + T 100 -9.1 -4.67038 | gap 1, opp_overlap 2083547, overlap 2083542 2083541 GGCACCACCACAAAA GGGTCGCGGC TTTT GCC-CGGCCC TTTTGCTTTTGGCAA Dole_1734 2085084 - 2083588 - | cobyric acid synthase CobQ TERM 3282 2084485 - 2084466 - G 75 -5.6 -4.57073 | opp_overlap 2084466, overlap 2084468 TACCGTCGGTAAAAA GATCCGGA TTGC CCCGGAAC TTGTTGATGATAAAA TERM 3283 2084511 - 2084501 - G 70 -4.6 -4.46212 | TTGTTGATGATAAAA CCGG CCA CCAG GTCACGTTCTTTTGG Dole_1735 2085767 - 2085081 - | TonB family protein TERM 3284 2085378 - 2085415 + g 77 -13.3 -2.90496 | opp_overlap 2085378, overlap 2085375 2085380 2085394 2085397 GTCCATGGCATCAAA CACCTGTGGCCCGGCAG GCAC CGGCGGGGCTTCAGGTG TGGTTTCAGCGCCGG TERM 3285 2085415 - 2085378 - G 78 -11.1 -3.74693 | opp_overlap 2085378 2085375 2085380 2085394 2085397 GTCCATGGCATCAAA CACCTGTGGCCCGGCAG GCAC CGGCGGGGCTTCAGGTG TGGTTTCAGCGCCGG TERM 3286 2085455 - 2085476 + g 74 -2.2 -5.00616 | GGGTCGTTTCAACCG GTTCCGGT GACACG GCAGGAAC TTTTTTCACGGCAGG TERM 3287 2085509 - 2085521 + g 90 -3.3 -5.75342 | overlap 2085500 2085503 CGGACCTGGCGGGCG CCGTA GCT TCCGG TTTTTTTTCAGGCAC TERM 3288 2085626 - 2085647 + g 74 -11.5 -3.53012 | GCTGACGGTAAGGTT CTGCAGCCG GCGC CGGCGGCAG TTTCACCGCCGGCAG Dole_1736 2086203 - 2085784 - | biopolymer transport protein ExbD/TolR TERM 3289 2086104 - 2086091 - G 72 -6.7 -4.36914 | GTCTCCTGGACAAAA CTGGT GGTC ACCAG GAAAAAGATCAACAG TERM 3290 2086138 - 2086111 - G 87 -7.8 -4.77036 | GGTCACCAGGAAAAA GATCAACAGGAT AAAA ATCATGTCGATC AGGGGCGCCATGTTG Dole_1737 2086824 - 2086219 - | MotA/TolQ/ExbB proton channel TERM 3291 2086474 - 2086417 - G 74 -11.1 -3.54424 | gap 1 GGTCAGCGCGTCAAA GGTGGCCACCATGCCGGTGACCGTGCCC AGC AGGCCCAG-CAGCGGCGCAATGGCCGCC AGCACGGCAATGACC TERM 3292 2086781 - 2086743 - G 71 -7.3 -4.16785 | gap 1, opp_overlap 2086759, overlap 2086744 ACAGCACAAAGGAAA CCGCCAGCAGCGGCACCA TGAC CGGC-CCGCCGCCGGCCA GGTATTCGCCCACGC Dole_1738 2088551 - 2086821 - | MotA/TolQ/ExbB proton channel TERM 3293 2087587 - 2087577 - G 91 -8.2 -5.12707 | opp_overlap 2087577 GGAAAGGGCAAAAAA CCGG TTC CCGG TTTCTGAATACAGGG TERM 3294 2088183 - 2088170 - G 100 -9.5 -5.00616 | GGGTCTGGTAAAAAA GGGCC GCCC GGCCC AGCCGCAGCACGTCT TERM 3295 2088580 - 2088619 + H 83 -4.9 -5.31275 | opp_overlap 2088585, overlap 2088581 2088585 GTTCCGCGTGCCAAA AAAAATCCCCGGATCGA CATTCA TCGACCCGGGGATTCCC TTTTTTATCCTCAAG TERM 3296 2088581 - 2088618 + H 71 -8.4 -3.78042 | opp_overlap 2088585, overlap 2088580 2088585 TTCCGCGTGCCAAAA AAAATCCCCGGATCGA CATTCA TCGACCCGGGGATTCC CTTTTTTATCCTCAA TERM 3297 2088614 - 2088585 - H 100 -16.5 -5.75342 | opp_overlap 2088585 2088581 2088580 GCGTGCCAAAAAAAA TCCCCGGATCGAC ATTC ATCGACCCGGGGA TTCCCTTTTTTATCC TERM 3298 2088585 - 2088614 + H 91 -13.6 -3.55457 | opp_overlap 2088585, overlap 2088581 2088580 GCGTGCCAAAAAAAA TCCCCGGATCGA CATTCA TCGACCCGGGGA TTCCCTTTTTTATCC TERM 3299 2089459 - 2089485 + G 76 -5 -4.82901 | overlap 2089460 TCCTGGCCCATCCCA CCACGCTTACCG GGT CAGTGGGCGTGA TTTTTGTCACGCCAC TERM 3300 2089728 - 2089708 - g 75 -4 -4.86862 | gap 1 TGGAAAAAATCAAAA CAGCCCGCA TCTT TACGG-CTG ACGACGCCCTTTCCG TERM 3301 2089743 - 2089766 + G 88 -16 -3.06696 | GACGACGCCCTTTCC GCCGGCCTGG TTGA CCAGGTCGGC TATCTTGAAGACGCC TERM 3302 2089820 - 2089799 - g 86 -5.7 -5.08824 | overlap 2089801 2089802 GGCCCAGGCAAAAAA GATGGCCGG GCTG CCGGACAAC GCGGCCGTGGTGACC TERM 3303 2089818 - 2089801 - g 71 -6.9 -4.17608 | overlap 2089799 2089802 CCCAGGCAAAAAAGA TGGCCGG GCTG CCGGACA ACGCGGCCGTGGTGA Dole_1739 2089047 - 2090006 + | signal peptide peptidase SppA, 36K type Dole_1740 2090865 - 2090020 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3304 2090591 - 2090607 + g 77 -10.8 -3.81488 | opp_overlap 2090590 2090591 CCGAATGTGACAAAG GGCGCG GCATA CGCGCC TTCTGTTTCAGAAAG TERM 3305 2090956 - 2090944 - R 85 -10.5 -4.19817 | opp_overlap 2090928 2090927 TGGACTGATGGAAAA CGGCG GAC CGCCG CGTTCGGTCAGACAG Dole_1741 2092088 - 2090964 - | diguanylate cyclase TERM 3306 2091131 - 2091153 + g 71 -7.6 -4.08216 | opp_overlap 2091118, overlap 2091120 AAGGGCCCAGGTTGG GGGCGTCTTC GTT GAAGTCGACC TTTTCCACGGCCTGG TERM 3307 2091539 - 2091564 + g 87 -6.8 -5.00616 | gap 1, overlap 2091542 2091542 TGGCCACGTTTTCCG CCACC-GCGGC AAAAA GCCGCAGGTCG TTTTTTGAAAACCCG Dole_1742 2093753 - 2092188 - | radical SAM domain-containing protein TERM 3308 2092675 - 2092695 + g 75 -5.3 -4.62069 | CGGGCCACCTCTCTG GCCCTGTCC AGG GAAAAGGGC TTTTTCACGTAAGCG TERM 3309 2092737 - 2092716 - G 74 -11.5 -3.61268 | CACGTAAGCGGCAAA GGTGTCCGG ATCT CCGGACTCC ACAGCCAGGGTGATC TERM 3310 2093388 - 2093359 - G 82 -8.5 -4.42386 | gap 1, overlap 2093361 TGCTCAGCCAGAAAA GAGGGGTGGGTGCC GCC GGCAACCACCAC-C ATGTCCGGGTCAATC TERM 3311 2093387 - 2093361 - G 83 -12.2 -3.82117 | overlap 2093359 CTCAGCCAGAAAAGA GGGGTGGGTGCC GCC GGCAACCACCAC CATGTCCGGGTCAAT TERM 3312 2093718 - 2093702 - G 72 -4.4 -4.67168 | overlap 2093693 AAAAAGGCGGAAAAA TCAGCA TCACC CGCTGA ATGGGACGCAGGGGG Dole_1743 2095035 - 2094391 - | metallophosphoesterase Dole_1744 2095474 - 2095103 - | hypothetical protein Dole_1745 2096323 - 2095532 - | thymidylate synthase-like protein TERM 3313 2096301 - 2096279 - G 71 -10.6 -3.56594 | GTAAACCGCCTGAAA CCAGAGATCC GGC AGATCCCTGG CCTCTACCCTGTGCA TERM 3314 2097304 - 2097271 - g 75 -3.7 -4.82901 | gap 1, overlap 2097253 2097250 2097279 TCTTCTCCAGAAAAA CGT-CGAAAGCCGGCC CCG GTCCGGCCGCCGAACA ACTGGCGTGGCTGGA TERM 3315 2097295 - 2097279 - g 72 -9.3 -3.69455 | overlap 2097271 AGAAAAACGTCGAAA GCCGGCC CCG GTCCGGC CGCCGAACAACTGGC Dole_1746 2096400 - 2097998 + | metallophosphoesterase TERM 3316 2098284 - 2098264 - g 71 -10.3 -3.53811 | TCCATGCTGGCCAAA CTGGCCGCC GTG GACGGCCGG GTAACGAAAGAAGAA TERM 3317 2098339 - 2098301 - g 70 -3.8 -4.62669 | gap 1, opp_overlap 2098308, overlap 2098303 TAACGAAAGAAGAAA TGGAAGCGGTCCAGCGC TTCATG GCTCAGGACCT-TTCCA TGACCGAAAAAAACC Dole_1747 2098060 - 2098815 + | heat shock protein DnaJ domain-containing protein Dole_1748 2099627 - 2098812 - | beta-lactamase domain-containing protein TERM 3318 2099261 - 2099290 + g 70 -4.2 -4.57569 | gap 2, opp_overlap 2099259 2099258 CGGCATCCACAACCG CCGG-CAGG-GGCG ATAC CGCCACCGGGTCGG TTTTTCCCCAGATCA Dole_1749 2100979 - 2099624 - | MiaB-like tRNA modifying enzyme TERM 3319 2100005 - 2099983 - G 78 -4 -4.88222 | opp_overlap 2099983, overlap 2099985 ACGAAAAGGGAAAAA CATGCAGGTA GCT CACCGGCAGG GTTTCAACCAGGCAA Dole_1750 2102229 - 2101153 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 3320 2102482 - 2102464 - R 100 -16 -3.06815 | ATGTTCCGCAACACA GTCCCGCC GAT GGCGGGAC CAAGGTGACTCGCCC Dole_1751 2104868 - 2102649 - | methyl-accepting chemotaxis sensory transducer TERM 3321 2104807 - 2104784 - G 71 -10.4 -3.60419 | overlap 2104770 ACCCGGAAATCAGAA TGCCGATCAT GCCC ATGATCAGCA CACCGGATACCGAGA TERM 3322 2105231 - 2105243 + G 85 -3.3 -5.44119 | AACCGTTTTTACCCT GGGCA ATG TGGCC TTTTTTTCCCATAAG Dole_1752 2105028 - 2105933 + | diguanylate cyclase TERM 3323 2105951 - 2105939 - f 80 -6.9 -4.71426 | overlap 2105942 TTCGGATTAATAAAA CCACC GGG GGCGG GAAACCAGCCGGAAC TERM 3324 2106219 - 2106247 + G 79 -5.2 -4.85599 | gap 1 CATGTTGAAGACCGG CGCA-CTGGCCGC TTCC GTGGCAGGCTGCG TTTTTCTGGCCTCCC TERM 3325 2107274 - 2107257 - g 72 -5.5 -4.42748 | gap 1, overlap 2107258 CCATGGCAAAAACAA CCCG-GCC TGG GGCGCGGA CGTGGGTTTTTACAG TERM 3326 2107921 - 2107931 + G 77 -8.2 -4.32034 | GTGGAAAACCCCTTC GGCC TCG GGCC TTTTCCTGCTGGTGC Dole_1753 2106130 - 2108436 + | FG-GAP repeat-containing protein TERM 3327 2109759 - 2109776 + G 81 -4.1 -5.03314 | opp_overlap 2109751 2109749 GAAGAGACGCCTTCC GTGAATG ACGG CATCCAC TTTTTTGAAAATACC TERM 3328 2110493 - 2110472 - g 72 -6.5 -4.3129 | gap 1, opp_overlap 2110476 TACGTACTATGAAAA CGTGGGCAGT GCC ACGGCCC-CG GCCTTTGCGCCGGTG Dole_1754 2108481 - 2110811 + | FG-GAP repeat-containing protein TERM 3329 2110820 - 2110877 + F 100 -2.8 -6.23545 | gap 3, opp_overlap 2110827 2110836, overlap 2110836 CAGATAGAGCAGAAA C--AGACAA-CCTCAAAAAGGGAGGGGCG CTT TGCCCCTCCCTTTTTGTGTCTTGGCAACG TTTTTTTTCTTTCCC TERM 3330 2110867 - 2110827 - f 100 -18.4 -3.80881 | opp_overlap 2110820 2110836, overlap 2110836 AGCAGAAACAGACAA CCTCAAAAAGGGAGGGGC GCTTT GCCCCTCCCTTTTTGTGT CTTGGCAACGTTTTT TERM 3331 2110836 - 2110858 + F 100 -17 -5.10064 | opp_overlap 2110836 2110827, overlap 2110820 AGACAACCTCAAAAA GGGAGGGGCG CTT TGCCCCTCCC TTTTTGTGTCTTGGC TERM 3332 2110858 - 2110836 - f 100 -16.3 -4.69622 | opp_overlap 2110820 2110836, overlap 2110827 AGACAACCTCAAAAA GGGAGGGGC GCTTT GCCCCTCCC TTTTTGTGTCTTGGC TERM 3333 2112412 - 2112399 - g 81 -3.7 -5.12707 | GGAAATCCGAAAAAA CGGGG AGCA CGCCG AGATTCTCTCCCTTT Dole_1755 2111080 - 2113161 + | GCN5-related N-acetyltransferase TERM 3334 2113640 - 2113661 + G 90 -7.3 -5.04601 | TTTACGCCATCACCG GGCATGACA AGAA TTTCATGCC TTTTTCATTTATGGC TERM 3335 2113695 - 2113682 - g 70 -3.7 -4.62783 | CATTTATGGCAAAAA GCGCG GCAA CGCTC TCCCTGGCCGGCCTT TERM 3336 2114063 - 2114075 + G 72 -4.7 -4.63218 | ACCTGGATAGCGACG GCGAC CTG GACGC TTTTGTTGGGGAGGG TERM 3337 2114725 - 2114709 - g 75 -4.3 -4.74132 | ACATTTTATGAAAAA CACCGGC ACC GACGATG ACCCCGCCTTTACCG TERM 3338 2115141 - 2115151 + G 72 -4.6 -4.58283 | CGCAGACACCTATCG CTGG GCA CCGG TTTTTGCCGACATTG TERM 3339 2115170 - 2115194 + G 78 -4.1 -4.91511 | overlap 2115171 TTGCCGACATTGATG GTGACGGCGAC ATG GACGCCTTCAA TTTTTATGATGCACT Dole_1756 2113603 - 2115729 + | FG-GAP repeat-containing protein TERM 3340 2116288 - 2116264 - g 74 -7.7 -4.11216 | opp_overlap 2116264 TGCCTATTTTGAAAA CACCGGTACCG CCT CGGCCCCTGTG TTTACCCTGCAAAAC TERM 3341 2116668 - 2116651 - g 71 -8.3 -4.07885 | overlap 2116663 CAGTTTGCTGGAAAA CCTGGGG ACAA CCCCGGG TCCTGAAGGCCCCAC TERM 3342 2117273 - 2117290 + G 80 -2.6 -5.28176 | TTTGAAAAACAGGCC GAAGGG AACAAC CCCCTC TTTTTTGTGGATGCA TERM 3343 2117309 - 2117326 + G 75 -9.1 -3.9777 | overlap 2117302 TTTGTGGATGCATGG CTGCGGG GCGC CCTGCAG TTTGTGGATATTGAC TERM 3344 2117355 - 2117400 + G 70 -2.4 -4.83169 | opp_overlap 2117377, overlap 2117348 2117387 ACGGCGACGGCGATA TGGACGCCTTTACCGGCAGA TACGGT TATACCGGCGGTGGCGTCTA TTTTTATGAAAACGT TERM 3345 2117756 - 2117776 + G 90 -7.6 -5.00616 | GACGTGTTTATGGGA GAGGAATC CGGCC GGTTCCTC TTTTTTGAAAACCAC Dole_1757 2115767 - 2117959 + | FG-GAP repeat-containing protein TERM 3346 2117986 - 2118008 + F 100 -14.9 -5.64421 | opp_overlap 2117986 ACCATATGACAAAAA GGAGGGCCT TTTTC AGGCCCTCC TTTTTTGTTTACAAT TERM 3347 2118008 - 2117986 - f 100 -14.9 -4.95758 | opp_overlap 2117986 ACCATATGACAAAAA GGAGGGCCT TTTTC AGGCCCTCC TTTTTTGTTTACAAT TERM 3348 2118388 - 2118372 - g 87 -7.9 -4.7373 | overlap 2118374 TGATGCGATCAAAAA CCCCGGA CGA TCCGGCG CTCAAAAAACTGGCG Dole_1758 2118065 - 2118964 + | ApbE family lipoprotein TERM 3349 2119087 - 2119040 - T 77 -8.6 -4.14874 | opp_overlap 2119042 2119043, overlap 2119031 2119042 2119043 2119051 ATAACACCGTTAAAA CAGGCTTAAAAGGGCCTTTTGA GGCA TCAAAAGGTGCTTTTAAGCTTT TTGCCACCACCGAGT TERM 3350 2119085 - 2119042 - T 81 -11.2 -3.66658 | opp_overlap 2119042 2119043, overlap 2119040 2119043 2119051 AACACCGTTAAAACA GGCTTAAAAGGGCCTTTTGA GGCA TCAAAAGGTGCTTTTAAGCT TTTTGCCACCACCGA TERM 3351 2119084 - 2119043 - T 90 -14.7 -2.79272 | opp_overlap 2119042 2119043, overlap 2119042 2119040 2119051 ACACCGTTAAAACAG GCTTAAAAGGGCCTTTTGA GGCA TCAAAAGGTGCTTTTAAGC TTTTTGCCACCACCG TERM 3352 2119043 - 2119084 + T 100 -16.9 -4.56597 | opp_overlap 2119043 2119042 2119040 2119051, overlap 2119042 ACACCGTTAAAACAG GCTTAAAAGGGCCTTTTGA GGCA TCAAAAGGTGCTTTTAAGC TTTTTGCCACCACCG TERM 3353 2119254 - 2119244 - T 91 -6.8 -5.26119 | opp_overlap 2119243 2119244, overlap 2119252 CTGCCAAAAACAAAA GCCT GAA AGGC GTTAATCACCGTTCT Dole_1759 2119478 - 2119260 - | prevent-host-death family protein Dole_1760 2119872 - 2119480 - | PilT domain-containing protein TERM 3354 2120175 - 2120148 - H 83 -8.4 -4.62069 | opp_overlap 2120151, overlap 2120150 2120151 CGCGCAGGTTAAAAA CAGCCCGTCATG TGGC CATGACGGGTTT TGTTATTTCAATAAA TERM 3355 2120173 - 2120150 - H 85 -11 -3.92746 | opp_overlap 2120151, overlap 2120148 2120151 CGCAGGTTAAAAACA GCCCGTCATG TGGC CATGACGGGT TTTGTTATTTCAATA TERM 3356 2120151 - 2120172 + H 100 -14.5 -5.011 | opp_overlap 2120151 2120150 2120148 GCAGGTTAAAAACAG CCCGTCATG TGGC CATGACGGG TTTTGTTATTTCAAT TERM 3357 2120172 - 2120151 - H 91 -14.5 -2.95166 | opp_overlap 2120151, overlap 2120150 2120148 GCAGGTTAAAAACAG CCCGTCATG TGGC CATGACGGG TTTTGTTATTTCAAT TERM 3358 2120631 - 2120619 - g 75 -5.5 -4.71426 | overlap 2120621 2120623 TGGTCATCAACAAAA TCGAC CGG GCCGA TGCCCGTCCCGCTGA TERM 3359 2120792 - 2120776 - g 70 -3.6 -4.64846 | GGACAAAGGAGAAAA CCTGCA CCTGC TGCTGG ACATGATGATAGACG Dole_1761 2120165 - 2122069 + | small GTP-binding protein Dole_1762 2123365 - 2122049 - | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein TERM 3360 2122107 - 2122134 + g 70 -4 -4.56597 | gap 1, opp_overlap 2122126, overlap 2122109 AGGTCCACATGGTGC CTG-GCCGCTCCG GAA TGGAGCGACACCG TTTTTCCGGCGGCAC TERM 3361 2123068 - 2123040 - G 75 -11.8 -3.27653 | overlap 2123038 2123042 2123061 2123062 AGGGGCACCAGAACA CAGACGGCTTTG CCGGC CAAAGCCGTCTC GGCCACGGCATGACC TERM 3362 2123066 - 2123042 - G 86 -14.4 -3.20322 | overlap 2123040 2123038 2123061 2123062 GGGCACCAGAACACA GACGGCTTTG CCGGC CAAAGCCGTC TCGGCCACGGCATGA Dole_1763 2125403 - 2123370 - | ABC-type branched-chain amino acid transport systems periplasmic component-like protein TERM 3363 2124390 - 2124365 - G 95 -3.8 -5.75342 | opp_overlap 2124383, overlap 2124348 2124368 CCTCCTCAAAAAAAA CAAGGGGGCC GATGAT GGCCGCCACG CGGTTTTCCGCAAGC TERM 3364 2124387 - 2124368 - G 86 -6.3 -4.96028 | opp_overlap 2124383, overlap 2124348 2124365 CCTCAAAAAAAACAA GGGGGCC GATGAT GGCCGCC ACGCGGTTTTCCGCA TERM 3365 2124383 - 2124393 + g 71 -8.2 -4.08216 | opp_overlap 2124368 2124365 GGGGGCCGATGATGG CCGC CAC GCGG TTTTCCGCAAGCTCC TERM 3366 2124633 - 2124668 + g 86 -8.9 -4.66609 | gap 1, opp_overlap 2124630 2124632 2124633, overlap 2124634 GATCCGCTCAAACAG GTCCCGGGCCTGCCCG GTATA CGGGTTG-CCCGGGAA TTTTTCCATGAAATC TERM 3367 2124634 - 2124667 + g 76 -12.4 -3.39483 | gap 1, opp_overlap 2124630 2124633 2124632, overlap 2124633 ATCCGCTCAAACAGG TCCCGGGCCTGCCCG GTATA CGGGTTG-CCCGGGA ATTTTTCCATGAAAT TERM 3368 2125274 - 2125264 - G 83 -8.2 -4.56597 | overlap 2125266 TCCTGCCGGGAAAAA GCCG CCT CGGC CCGGGCAAACAGCTG Dole_1764 2126366 - 2125422 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 3369 2125833 - 2125800 - G 74 -10.9 -3.53012 | gap 1 GGGGTCTTCGGCAAA GCCGTGGGCCTGCCGG TGG CCGG-AGGCCGGCAGC CCGGTGGACTCAAAC Dole_1765 2128004 - 2126385 - | thiamine-phosphate pyrophosphorylase TERM 3370 2126583 - 2126593 + g 77 -8.2 -4.36914 | GATCATCTCTTCGGG CCGG TTG CCGG TTTTCTCGCAGAACC TERM 3371 2127507 - 2127525 + g 90 -10.2 -4.57569 | opp_overlap 2127477 TGCGGCATTGATACC GCCGATGG CCA CCACCGGC TTTTTCGACCGGTCG Dole_1766 2128663 - 2128082 - | metal dependent phophohydrolase TERM 3372 2128523 - 2128544 + g 71 -7.1 -4.18018 | GTGCATGGCGGCCAC GACCCGGGC CACG GCCAGGGCC TTTTCCATCACCCGG TERM 3373 2128687 - 2128715 + r 91 -12.3 -3.80573 | TTTTCCTGTTTTACT GCGGCCGGCCGGT TCA ATCGGCCTGGCGC TTTAATCATCGTCCC Dole_1767 2129734 - 2128721 - | peptide chain release factor 2 TERM 3374 2129889 - 2129859 - R 71 -4.8 -4.62904 | AAACACCGGTAAAAA GAACCTCAAAAAAT TCA ATGTTTAGAGATTC CCTGAAGTTTTTGAT Dole_1768 2131501 - 2129873 - | apolipoprotein N-acyltransferase TERM 3375 2130636 - 2130626 - G 80 -2.4 -5.24647 | opp_overlap 2130626, overlap 2130628 ATACAGAAAATAAAA CGGC ATG GCGG TTTCCGGCAGCACCA Dole_1769 2132373 - 2131498 - | hypothetical protein Dole_1770 2133639 - 2132668 - | alpha/beta hydrolase fold TERM 3376 2132793 - 2132782 - G 76 -7.2 -4.42974 | CGCATAGACAATAAA CCGG GCAT CCGG AAGCGCATGGCGCCA TERM 3377 2133524 - 2133547 + g 70 -2.4 -4.72272 | overlap 2133526 TCGTTGAAATATTTT TTTTCCAGCT TTTC AACTGGAATA TTTTTAATCCCCAGC Dole_1771 2135572 - 2133707 - | aldehyde ferredoxin oxidoreductase TERM 3378 2134785 - 2134758 - G 73 -11.2 -3.34517 | opp_overlap 2134763 2134773, overlap 2134756 ACCTCTCCGGAAAGA TTGACGGCCCGG TCGT CCTGGCCGTCGA AAAAGTTGTTGATGG TERM 3379 2135068 - 2135099 + g 76 -3.5 -4.96848 | gap 1, opp_overlap 2135054, overlap 2135070 ACCGCACCCGGTTTT CCCCGGCCGGGCCG ATGGC CAGCAC-GCCGGTG TTTTTGTCTGCGGCA TERM 3380 2135547 - 2135563 + g 83 -4.4 -5.1675 | TCCAGGATACGGTTG GAGGTG CCTGT CATCTC TTTTTTCATGAATCC Dole_1772 2136263 - 2135655 - | TetR family transcriptional regulator TERM 3381 2135778 - 2135755 - G 74 -6 -4.49337 | gap 1 GGATAATGGAGAAAA GTCAG-CACCA CGC CGGTGACCGAC GCGAAAAACGCGTGA Dole_1773 2137530 - 2136574 - | TPR repeat-containing protein TERM 3382 2137375 - 2137365 - G 74 -2.4 -5.0133 | TAGCCTTGGAAAAAA GGGC AAT GGCC TGGTCCGGTTTGGAC Dole_1774 2139983 - 2137536 - | Patched family protein TERM 3383 2137722 - 2137710 - G 81 -3.3 -5.32882 | CATCAGCACAAAAAA GCCGA ATG CCAGC ACCACCGACGTGATC TERM 3384 2137929 - 2137911 - G 81 -3 -5.21709 | GGGCACATCAAAAAA CCCCATGA TGC CCAGGGAG AGAAAAATGGGAAAA TERM 3385 2138697 - 2138729 + g 72 -8.4 -3.85698 | gap 1, opp_overlap 2138699 2138702 ATTGGCGGTTCGCAA CAGGACCCGGTCCAT GACC AGGGACCGGC-CCTG TTTCTGCCGCCCGGC TERM 3386 2139012 - 2138996 - G 78 -3.6 -5.00616 | overlap 2139007 CCTCCTTGTAAAAAA GGGCCA GGATA TGGACC GAGTCGGCCACGCCC TERM 3387 2139789 - 2139805 + g 70 -5.1 -4.49311 | overlap 2139770 2139786 CTGGTCCCGGAACCG GTCGTAT TCG ATGCGGC TTTTGTCATGCTCGT TERM 3388 2139921 - 2139902 - G 93 -5.6 -5.64274 | GCACGCAGAAAAAAA CCAGCACC TTCA GGCGATGG GTATAAAGTGTGCGG TERM 3389 2140305 - 2140293 - H 72 -6.2 -4.4078 | GGCCCGGAACCAAAA GGCC GGGCA GGCC ATGGAGGGCGCCATG TERM 3390 2140490 - 2140434 - g 71 -11.5 -3.25088 | gap 1, opp_overlap 2140486, overlap 2140427 2140395 2140467 TGCCAAAGTCAGCAA GCTGATCAGCC-GCACCGGCGCCGTT GGCAGA AACACCGCCGGTACCGGCTGCGCCGC GCCTTCAGGCTCCGG Dole_1775 2140306 - 2140515 + | FmdB family regulatory protein TERM 3391 2140528 - 2140544 + F 100 -15.1 -4.19238 | TGAGCCACCTGAGCC GGGGGCG GTC CGCCCCC TTTTCCCCTTAAGCG TERM 3392 2141997 - 2141974 - g 84 -3.8 -5.32882 | gap 1 CATCACCACAAAAAA CCATTGTCCCG ACG CCGG-CAACGG ACCGGAGATGGTCGA Dole_1776 2140694 - 2142253 + | histidine kinase Dole_1777 2142240 - 2143637 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 3393 2144203 - 2144182 - g 78 -3.7 -4.98672 | gap 1, overlap 2144183 2144184 CTGAAAAATACAAAA TC-TCCCGCC AGG AGCAGGATGA ATGGGCTTTGATGAG TERM 3394 2144318 - 2144298 - g 100 -2.5 -6.11229 | opp_overlap 2144298 ATTAAAACAAAAAAA GGTGACA CCATCTT TGACACC GATGAACACCCCCGG TERM 3395 2144357 - 2144375 + G 74 -11.6 -3.53012 | opp_overlap 2144327 CACCCTGGAGCGGCT GGCGGCCC TGC GGCCCGCC TTTAAAAAAGAGGGC Dole_1778 2143638 - 2144855 + | acetyl-CoA acetyltransferase TERM 3396 2144944 - 2144915 - f 91 -7.1 -5.28942 | gap 1, opp_overlap 2144916, overlap 2144909 TACCCCAAAGAAAAA GGGCCTGTGACC TTTTATC GG-CACGGGCCC TTAGAGTTCCGGTGG TERM 3397 2145139 - 2145126 - f 70 -9.5 -3.21276 | overlap 2145124 CCCTCGTTGACAACA CCCGG TGGG CCGGG TAATAGTAACCGGAT TERM 3398 2145626 - 2145604 - g 71 -7 -4.13767 | gap 1 CTGTCCAGGTCAAAA GCGCGGCCA TTCTGC TGGC-GCGC CTTGAAAAATTTTCA TERM 3399 2145722 - 2145740 + G 81 -3 -5.28755 | GGCCTTTACCCATCC GGGCCG GCTGACA CGACCC TTTTTTGATGTGTTT Dole_1779 2145153 - 2145938 + | endonuclease/exonuclease/phosphatase Dole_1780 2146113 - 2146907 + | hypothetical protein TERM 3400 2147250 - 2147231 - g 82 -8.5 -4.45151 | opp_overlap 2147237, overlap 2147232 2147234 AACATCGAATTAAAA GGACCGG GCACCG CCGGCCC GGTGGCGGCTTTAAT TERM 3401 2147359 - 2147345 - g 78 -2.8 -5.0538 | CGGCAGGTGAAAAAA GCAAAA ACG CTCTGC CCCGGCCTTCCCATT Dole_1781 2146928 - 2147614 + | glycerophosphoryl diester phosphodiesterase TERM 3402 2147635 - 2147646 + F 71 -7.2 -4.13014 | CTCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCCGGCTGTCCA TERM 3403 2147759 - 2147770 + F 76 -7.2 -4.45083 | CCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCTGGCTGTCCA TERM 3404 2147968 - 2147938 - f 80 -9.3 -4.17048 | gap 1, opp_overlap 2147928 2147938 2147935 2147940 2147942 2147961 CGCCTTTGAAAACAA TATGTACACTATTG TATT CAAT-GTGTACATA TGATATTAAAATGTA Dole_1782 2148031 - 2148267 + | prevent-host-death family protein Dole_1783 2148267 - 2148701 + | PilT domain-containing protein TERM 3405 2148744 - 2148755 + T 76 -7.2 -4.45083 | CCCTGCTCGTAGTGA CGCC GTCA GGCG TTTTCTGGCTGTCCG TERM 3406 2148837 - 2148848 + T 71 -7.2 -4.13014 | TTCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCCGGCTGTCCA TERM 3407 2148930 - 2148941 + T 76 -7.2 -4.45083 | TTCTGCTCGTAGTGA CGCC GTCA GGCG TTTTCTGGCTGTCCA Dole_1784 2149598 - 2149005 - | hypothetical protein TERM 3408 2150089 - 2150100 + r 71 -7.2 -4.13014 | TTCTGCTCGTAGTGA CGCC GTCA GGCG TTTTCCGGCTGTCCG Dole_1785 2151747 - 2150224 - | NifA subfamily transcriptional regulator TERM 3409 2151520 - 2151538 + g 73 -3 -4.7373 | overlap 2151521 2151522 2151535 GCCGATAATCCCCTC CCCCACCT TGT AGGTGGCC TTTTTCATGGCCTGC TERM 3410 2151956 - 2151967 + H 73 -7.2 -4.16943 | CCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAACTGTCCGG TERM 3411 2152049 - 2152060 + H 73 -7.2 -4.16943 | TCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAGCTGTCCGG TERM 3412 2152142 - 2152153 + H 73 -7.2 -4.16943 | TCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAACTGTCCGG TERM 3413 2152235 - 2152246 + H 73 -7.2 -4.16943 | TCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAGCTGTCCGG TERM 3414 2152328 - 2152339 + H 73 -7.2 -4.16943 | CCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAACTGTCCGG TERM 3415 2152420 - 2152431 + H 73 -7.2 -4.16943 | TTCTGCTCGTAGTGA CGCC GTCA GGCG TTTTCAGCTGTCCGG TERM 3416 2152513 - 2152524 + H 73 -7.2 -4.16943 | CCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAACTGTCCGG TERM 3417 2152606 - 2152617 + H 73 -7.2 -4.16943 | TCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAGCTGTCCGG TERM 3418 2152699 - 2152710 + H 73 -7.2 -4.16943 | CCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAGCTGTCCGG TERM 3419 2152792 - 2152803 + H 73 -7.2 -4.16943 | CCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAACTGTCCGG TERM 3420 2152885 - 2152896 + H 73 -7.2 -4.16943 | CCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAGCTGTCCGG TERM 3421 2152978 - 2152989 + H 73 -7.2 -4.16943 | CCCTGTTCGTAGTGA CGCC GTCA GGCG TTTTCAGCTGTCCGG TERM 3422 2153159 - 2153136 - H 82 -10.4 -3.91897 | opp_overlap 2153127 2153136 TCTCTGATTGACAAA TAGCGTCACT CCAA AGTGACACTA TTTGTAAAAATTTGG TERM 3423 2153136 - 2153159 + H 73 -8.2 -3.91072 | opp_overlap 2153136, overlap 2153127 TCTCTGATTGACAAA TAGCGTCACT CCAA AGTGACACTA TTTGTAAAAATTTGG TERM 3424 2153658 - 2153633 - g 87 -3.9 -5.37345 | gap 1, overlap 2153623 CTCAACCAGAAAAAA CTGGTAGCCCGC AGG GAGGACC-CCAG GGATCTGCGAGCCAA Dole_1786 2153402 - 2153887 + | MarR family transcriptional regulator TERM 3425 2157878 - 2157860 - g 82 -6.6 -4.7373 | overlap 2157862 GCACTGGATGAAAAA CGCCGACA CCG TGCCGGAG CTGACGGCCTGGGGC Dole_1787 2153988 - 2157986 + | polymorphic outer membrane protein TERM 3426 2158011 - 2158047 + F 100 -21.7 -5.00884 | opp_overlap 2158011 2158031 CCGGCGCACACCAGA GCCGGATCACGGGCT TCAAACC GGCCCGTGATCCGGC TTTTTTCCGAACCAT TERM 3427 2158047 - 2158011 - f 100 -21 -2.85351 | opp_overlap 2158011, overlap 2158031 CCGGCGCACACCAGA GCCGGATCACGGGC TTCAAACCG GCCCGTGATCCGGC TTTTTTCCGAACCAT TERM 3428 2159960 - 2159938 - g 72 -9.8 -3.75738 | TACCATCACCAACAA CACCGCTCTC TAT GAAGGCGGTG GAATGGATAACTATG TERM 3429 2160394 - 2160416 + G 88 -11.2 -4.18197 | overlap 2160394 2160396 CACCATCAGTGGCAA TGCCGCCGAC AAC GGCGGCGGTA TTTTCAATGGCGGGT TERM 3430 2160394 - 2160413 + G 73 -12.8 -2.81208 | overlap 2160394 2160396 CACCATCAGTGGCAA TGCCGCCG ACAA CGGCGGCG GTATTTTCAATGGCG TERM 3431 2160396 - 2160414 + G 78 -11.6 -3.69216 | overlap 2160394 2160394 CCATCAGTGGCAATG CCGCCGAC AAC GGCGGCGG TATTTTCAATGGCGG Dole_1788 2158421 - 2161699 + | polymorphic membrane protein Chlamydia TERM 3432 2161985 - 2162001 + G 77 -8 -4.38369 | opp_overlap 2161985 2161984 2161987 GCCGACAACCGAAAC CACTGG CAACC CCAGTG TTCTTTCTTTAATTA TERM 3433 2163038 - 2163055 + G 71 -6.9 -4.22554 | overlap 2163040 TTGGCATCAGACAGT GCCTGCG CCGA CGCAGTC TTATTTGTTAAATCC TERM 3434 2163654 - 2163667 + G 74 -2.3 -5.00616 | AGGTATATTCCAGCC CGGAT TACT ACCCG TTTTTTACCCCGGAA TERM 3435 2164111 - 2164123 + G 85 -3.3 -5.41143 | opp_overlap 2164112, overlap 2164112 GCATGCTACCATAAA TGGCC GGG GGTCG TTTTTTTCAGCCATG Dole_1789 2161724 - 2165095 + | hypothetical protein TERM 3436 2166901 - 2166859 - g 70 -4.1 -4.66537 | gap 2, opp_overlap 2166874 TGGCGCAACAGAAAA GCTGGTGGTTGACTTCGGCGG GGG CCGCCGTA-TCTAC-ACCTAC AACGGAGCCTGGAGC TERM 3437 2166874 - 2166888 + G 74 -12.8 -2.88544 | opp_overlap 2166859 GCTGGTGGTTGACTT CGGCGG GGG CCGCCG TATCTACACCTACAA Dole_1790 2165108 - 2167507 + | polymorphic membrane protein Chlamydia TERM 3438 2167532 - 2167569 + F 100 -15.5 -4.38712 | opp_overlap 2167552 CAATCCAATCCCTTA CCCCGCAAGCTGGGGCC AAAC GGCTTCAGCCTGCCGGG TTTTATCCGCGTGGA TERM 3439 2168509 - 2168519 + G 76 -4.6 -4.72497 | CTGATTGTCACGGCA TCGG CAC CCGG TTTTATTGATGCATG Dole_1791 2167666 - 2169675 + | hypothetical protein TERM 3440 2169741 - 2169695 - f 80 -12.3 -2.89191 | opp_overlap 2169700, overlap 2169656 2169700 2169720 TCACACCGGCACACA CCAGAGCCGGATCACGGGC TTCAAACCG GCCCGTGATCCGGCTTTTT TTATCCCTCCTGCTC TERM 3441 2169736 - 2169700 - f 100 -21 -2.88999 | opp_overlap 2169700, overlap 2169695 2169720 CCGGCACACACCAGA GCCGGATCACGGGC TTCAAACCG GCCCGTGATCCGGC TTTTTTTATCCCTCC TERM 3442 2169700 - 2169736 + F 100 -21.7 -5.64274 | opp_overlap 2169695 2169700 2169720 CCGGCACACACCAGA GCCGGATCACGGGCT TCAAACC GGCCCGTGATCCGGC TTTTTTTATCCCTCC TERM 3443 2169943 - 2169914 - f 77 -8.7 -4.17425 | opp_overlap 2169918, overlap 2169935 ATAAGGATGCGAAAA GTAACCCTCTTTC AACA AAAAGACGGTTAC TCCGCCATAAAAAAA TERM 3444 2169949 - 2169935 - f 80 -4.9 -5.06414 | opp_overlap 2169918, overlap 2169914 CTCTTTCAACAAAAA GACGG TTACT CCGCC ATAAAAAAATATGTT TERM 3445 2169984 - 2170012 + F 100 -11.8 -5.27923 | opp_overlap 2169984 2169983 AAATGTCGTTACAAT CGGCCTGTCTTT TGCCT AAAGATGGGCCG TTTTTTATAGGCTTC Dole_1792 2170069 - 2172867 + | hypothetical protein TERM 3446 2172888 - 2172924 + F 100 -23.1 -5.44119 | overlap 2172915 AACTCCTACTCTCCA TGCCGGATCTGGGCCGA CTT TCGGTCCGGGTCCGGCA TTTTTTTGCCCTGCC TERM 3447 2173001 - 2173032 + F 88 -7.2 -5.16132 | overlap 2173013 AGAATTGACACATCC CCGGCAGTTCGCTA TAAC TGGCAAGCTACCGG TTTTATTTTGATCTG TERM 3448 2173180 - 2173167 - g 87 -3.7 -5.48303 | overlap 2173168 2173169 AGAAGCTGAAAAAAA TCCGG CATC CCGGC CTTCAGCCCCGGCCA Dole_1793 2173072 - 2173746 + | fibronectin type III domain-containing protein TERM 3449 2174031 - 2174014 - g 78 -7.7 -4.49756 | overlap 2174016 CCCGAAATATTAAAA TCGCCAG GGCA CTGGCAA AAAGTATCTTAACTG Dole_1794 2173788 - 2174714 + | sulfotransferase TERM 3450 2175510 - 2175500 - g 73 -3.2 -4.85782 | GTTTTCAAAAACAAA CCCT ATA AGGA AATAATCTGGTATGA Dole_1795 2174822 - 2175658 + | hypothetical protein TERM 3451 2175733 - 2175710 - g 86 -6.7 -5.00138 | overlap 2175711 TATGTAAAGCAAAAA TGTGTCGGA CTAACT TCCGACACC CGGTTCTCCGAAATC TERM 3452 2175732 - 2175711 - g 71 -10.2 -3.58998 | overlap 2175710 ATGTAAAGCAAAAAT GTGTCGGA CTAACT TCCGACAC CCGGTTCTCCGAAAT TERM 3453 2176174 - 2176184 + G 76 -4.6 -4.7629 | TGTTCGGGGAGTTCG CCTG ATC CGGG TTTTTGCGTTCATGC TERM 3454 2176513 - 2176540 + G 81 -8.4 -4.32857 | overlap 2176514 AGGCTACTATTCCGC AGCCGTCAAGCT GGCG ACCTTGACGGCA TTTGTGTTTCAGGCC TERM 3455 2176514 - 2176539 + G 75 -11.9 -3.19232 | overlap 2176513 GGCTACTATTCCGCA GCCGTCAAGCT GGCG ACCTTGACGGC ATTTGTGTTTCAGGC TERM 3456 2176579 - 2176589 + G 79 -5.4 -4.72272 | TATGGCAGCCCCGAA GTTC TCT GAAC TTTTTCATACCGGAA Dole_1796 2175686 - 2177047 + | polysaccharide biosynthesis protein TERM 3457 2177811 - 2177792 - g 70 -2.1 -4.82863 | overlap 2177798 GAATTATAAAACAAA GGAAATG GCACAA CAGTTCC GCCGGCATTCTGGTT TERM 3458 2177962 - 2177947 - g 75 -4 -4.73388 | gap 1, overlap 2177948 2177949 AATGTTTATGAAAAA GCCGACA TGC TGTCG-C TGAGGAGTTCCGATT Dole_1797 2177044 - 2178096 + | putative poly-gamma-glutamate biosynthesis (capsule formation)-like protein Dole_1798 2178093 - 2178980 + | hypothetical protein Dole_1799 2178981 - 2179937 + | hypothetical protein TERM 3459 2180305 - 2180283 - g 81 -9.1 -4.27686 | opp_overlap 2180283 2180291 CAAAATCACCCAAAA CGCCACTGG TGGCT CCAGTGGGG CCCCTTTGCGTTTCT TERM 3460 2180513 - 2180547 + G 72 -4.8 -4.56597 | overlap 2180512 2180511 2180515 TCAATGCATTTGATG CCGGCCCGGCCCTTTT TGA AAGAGAGCATGGCCTG TTTTTAAGCAACCCA TERM 3461 2180570 - 2180590 + G 71 -6.9 -4.12911 | overlap 2180566 GCAACCCACCTTTCC TGCTGGAAT CTT ATTCCAACA TTCTTTATGAATTTG TERM 3462 2180952 - 2180938 - g 75 -4.2 -4.74103 | opp_overlap 2180938, overlap 2180940 TTTTCAATCCAAAAA TGTGCC TGC GGCAGA AATTTATTGTTGCTC Dole_1800 2179939 - 2181285 + | putative polysaccharide biosynthesis protein Dole_1801 2181285 - 2182727 + | hypothetical protein Dole_1802 2182717 - 2183832 + | glycosyl transferase group 1 Dole_1803 2183834 - 2184964 + | glycosyl transferase group 1 Dole_1804 2185013 - 2186260 + | glycosyl transferase group 1 Dole_1805 2186288 - 2187304 + | hypothetical protein Dole_1806 2187340 - 2188272 + | methyltransferase type 11 TERM 3463 2188321 - 2188286 - f 93 -12.8 -3.79565 | overlap 2188287 AGAAAGATACTGAAA CCTAGCCCGAATATTT CATG AAATATCCGGGCTAAA GGGGTGCTTTTCCAT TERM 3464 2188320 - 2188287 - f 88 -14.1 -2.86654 | overlap 2188286 GAAAGATACTGAAAC CTAGCCCGAATATTT CATG AAATATCCGGGCTAA AGGGGTGCTTTTCCA TERM 3465 2189355 - 2189384 + G 89 -6.3 -5.0538 | overlap 2189357 AAGGTTAAGTGCCTG CTGGGCAGGCC GATTGACG GGCATGCCCCG TTTTTTGACGTGGGC Dole_1807 2188347 - 2189438 + | radical SAM domain-containing protein TERM 3466 2189954 - 2189944 - g 89 -2.4 -5.75342 | opp_overlap 2189950 CTTGTTCAAAAAAAA TGCC GCC GGCC CTGCCATGTGATTTA Dole_1808 2189446 - 2190567 + | glycosyl transferase group 1 Dole_1809 2192126 - 2191131 - | hypothetical protein TERM 3467 2191797 - 2191784 - G 70 -2.3 -4.72272 | overlap 2191785 CGTTGGTATGAAAAA TCTCC TTCA GGAGG CCGGCCCTCAATAAT TERM 3468 2191823 - 2191834 + g 73 -3 -4.72556 | opp_overlap 2191813 ATAATTGCACCAACT TTGA CGCA TCAA TTTTGTCGTTTTTAG TERM 3469 2192198 - 2192181 - H 70 -9.9 -3.14961 | overlap 2192179 2192177 ATTATCACTAACATA TTGAGGC TGCC GCCTCAA AGGAGACCATCTTTC TERM 3470 2193712 - 2193675 - g 100 -19.3 -3.14132 | gap 1, opp_overlap 2193671, overlap 2193705 GCGGCTGTCCATGAA GCCG-GGCATTACCTGCC TGT GGCAGATAACGCCGCGGC GGAATGACTTGAGCT Dole_1810 2192308 - 2193840 + | undecaprenyl-phosphate galactose phosphotransferase Dole_1811 2193973 - 2194233 + | hypothetical protein Dole_1812 2194230 - 2194628 + | PilT domain-containing protein TERM 3471 2194789 - 2194778 - f 76 -2.2 -5.32882 | overlap 2194781 2194782 CATCACCATAAAAAA CGAC GGAT ATCG ATCCATGATACAACG TERM 3472 2194984 - 2195004 + G 80 -10.5 -3.9461 | opp_overlap 2194977 2194988, overlap 2194988 GGCAGGAATTGCCGC TAAAGGGCA AAA TGCCCTTTG TTGTTATTGACGAGG TERM 3473 2194988 - 2195000 + G 86 -9.1 -4.57882 | opp_overlap 2194977 2194988, overlap 2194984 GGAATTGCCGCTAAA GGGCA AAA TGCCC TTTGTTGTTATTGAC Dole_1813 2194794 - 2195942 + | AAA+ superfamily protein TERM 3474 2196552 - 2196565 + G 86 -6.7 -5.00616 | opp_overlap 2196552, overlap 2196539 GTTTGCTGCCAGAAA TCTGG ACAG CCAGA TTTTTTCAACGGAGG Dole_1814 2196430 - 2196588 + | hypothetical protein Dole_1815 2196585 - 2196962 + | hypothetical protein TERM 3475 2197149 - 2197138 - f 71 -7.2 -4.13767 | CCGGTCAGCCGAAAA CGCC TGAC GGCG TCACTACGAACGGGA TERM 3476 2197338 - 2197350 + G 73 -3.3 -4.76312 | TGACGCATAAACTTT GACAG ATT CTGCC TTTTTCAATATTATA Dole_1816 2197336 - 2197608 + | hypothetical protein Dole_1817 2197608 - 2197862 + | addiction module antitoxin TERM 3477 2199080 - 2199066 - g 78 -9.2 -4.09864 | overlap 2199033 ACCGACTTCTCAAAA GCCGGC GAA GCCGAC GCATTAATCCTGTGC TERM 3478 2199278 - 2199259 - g 100 -10.7 -5.36441 | opp_overlap 2199258 2199257 CCCGCATAGAAAAAA CCGGCCT TGTTCC AGGCCGG GATATTTTTCTTGTT Dole_1818 2198796 - 2200115 + | UDP-glucose/GDP-mannose dehydrogenase TERM 3479 2200856 - 2200804 - g 71 -7.3 -4.11216 | gap 3, overlap 2200809 2200839 2200842 TCTGGAGCTTGAAAA TG-CAAGGGTCAG-ATGGTTTC-TCA GCAT TGATGAAACCACGCTGCCCCCTGACA TTCAGGCGGCCGGCC Dole_1819 2200142 - 2201083 + | oxidoreductase domain-containing protein TERM 3480 2201440 - 2201421 - g 73 -11.4 -3.34715 | opp_overlap 2201433, overlap 2201419 2201422 CACTCTGGTCAAACA CGGCGCCA CCCT TGGCGCCA ACTGCACCATTGTCT TERM 3481 2201439 - 2201422 - g 71 -12.7 -2.60615 | opp_overlap 2201433, overlap 2201421 2201419 ACTCTGGTCAAACAC GGCGCCA CCCT TGGCGCC AACTGCACCATTGTC Dole_1820 2201098 - 2201661 + | hexapaptide repeat-containing transferase Dole_1821 2203685 - 2201688 - | sugar transferase TERM 3482 2201927 - 2201911 - G 77 -2.1 -5.11033 | overlap 2201912 TACAAGCTCAAAAAA TGACCAC TCA GCGGCCG CACCCCCACGATTTT TERM 3483 2202306 - 2202321 + g 70 -3.9 -4.67904 | GCCCAGCAGCTCCGC CCGGG AGATAA TCCGG TTTTTCCCCTTGGTA TERM 3484 2202614 - 2202576 - G 72 -8.7 -3.85817 | overlap 2202578 ATGCCGGTTTATAAA CAGCCGCACCGGCAGCT TCACC AGCCGCCGGTCCACCGG CTCACAGCTTTGCTC TERM 3485 2202978 - 2203001 + g 72 -5.1 -4.59773 | overlap 2202979 CACCACCGCCGCCAC CCCGGCCAG CATAAT CAGGCCGGC TTTTTGCCACTGCCA Dole_1822 2204818 - 2204069 - | hypothetical protein Dole_1823 2205933 - 2204839 - | hypothetical protein TERM 3486 2204917 - 2204932 + g 70 -2.6 -4.7373 | TTTATCCGTGTAAAC CAGAAA TTGT TTTTTG TTTTTAATGACATCC TERM 3487 2205593 - 2205621 + g 79 -6.9 -4.61527 | overlap 2205599 ACGCCACCTGCTGTT GTAAAAAAAAGAT CAA ATCTTTCTTTTGC TTTTTCAAAACTTTT TERM 3488 2205599 - 2205615 + g 70 -2.3 -4.77757 | overlap 2205593 CCTGCTGTTGTAAAA AAAAGAT CAA ATCTTTC TTTTGCTTTTTCAAA Dole_1824 2206648 - 2205974 - | hexapaptide repeat-containing transferase Dole_1825 2207746 - 2206685 - | glycosyl transferase group 1 Dole_1826 2209341 - 2207989 - | transposase IS4 family protein TERM 3489 2209467 - 2209502 + r 93 -14.2 -3.52515 | opp_overlap 2209461, overlap 2209459 2209471 TTACAAGTAGTTATA TCTGTGGATGGACACT AGTT AGTGTCCATCCATAAA TTGTCGATTTTGGGT TERM 3490 2209471 - 2209498 + r 100 -17.2 -2.62718 | opp_overlap 2209461, overlap 2209467 2209459 AAGTAGTTATATCTG TGGATGGACACT AGTT AGTGTCCATCCA TAAATTGTCGATTTT Dole_1827 2211018 - 2209666 - | transposase IS4 family protein Dole_1828 2212302 - 2211175 - | UDP-N-acetylglucosamine 2-epimerase Dole_1829 2213504 - 2212338 - | hypothetical protein Dole_1830 2214456 - 2213497 - | hypothetical protein Dole_1831 2215483 - 2214464 - | hypothetical protein TERM 3491 2214562 - 2214550 - G 85 -2.6 -5.5353 | opp_overlap 2214558 CACATGAATAAAAAA CCCG CAGTT CAGG ATTATATTTTGATTT TERM 3492 2215334 - 2215356 + g 71 -7.1 -4.13767 | gap 1, opp_overlap 2215338, overlap 2215338 CCCTGACCGGATCAC CAGAGGTTTG AACT CAAACC-CTG TTTTCCACTGCACAA TERM 3493 2215415 - 2215401 - G 100 -4.2 -5.9218 | TACAGAAGAAAAAAA TTACCC AAC GGGTGA TTCAGAACAAACTGA Dole_1832 2216339 - 2215497 - | hypothetical protein Dole_1833 2217432 - 2216326 - | glycosyl transferase group 1 Dole_1834 2218534 - 2217437 - | hypothetical protein Dole_1835 2219734 - 2218808 - | hypothetical protein TERM 3494 2218873 - 2218861 - G 86 -4.9 -5.20328 | overlap 2218866 2218869 TTCTAAAAAAAGAAA TTGAA CGA TTCAA AAAACTTTTAAACTC Dole_1836 2221138 - 2219798 - | polysaccharide biosynthesis protein TERM 3495 2221201 - 2221219 + r 81 -13.1 -2.83964 | overlap 2221197 2221213 TTTTTTTTACTTCAT GGCGGCC ACAAC GGCCGCC TGGTCTTCTCTCCTC Dole_1837 2222313 - 2221192 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3496 2221347 - 2221325 - G 71 -7 -4.11484 | gap 1 CCCAAGTCGGTAAAA GCGCC-CTG AAGATG CAGAGGCGC CGTGTAATAGGCCAC TERM 3497 2221995 - 2221983 - G 90 -6.2 -5.19251 | GAATATCAATAAAAA CGGG TTTGG CCCG CAGCAGCGCGATAAC Dole_1838 2224990 - 2222633 - | O-antigen polymerase TERM 3498 2223238 - 2223254 + g 78 -9.3 -4.09511 | opp_overlap 2223221 2223220 GCAGGCCGGCATTGC GGGCGGC CTG GCCGGCC TTTTGAAGCAGTGTT TERM 3499 2224109 - 2224131 + g 73 -3.2 -4.84033 | opp_overlap 2224105, overlap 2224105 2224110 GGCCATCAGAACGGC GCACAGCAGC ATT GCGGCGGTGA TTTTCATTTTTGTGT TERM 3500 2224267 - 2224243 - G 78 -4.3 -4.90455 | overlap 2224244 AGAGACTGATAAAAA CCGACATCA CCATGAT TGATGCCGA AAGCAGAAGAAGAAT TERM 3501 2224411 - 2224393 - G 70 -2.3 -4.72272 | gap 1, overlap 2224396 2224397 GGGTGGGACCAAAAA GCATGGCC ATAA GGCCG-GC GTAGTGGTTGCGGTT TERM 3502 2224804 - 2224792 - G 74 -6.2 -4.49937 | GCAAGAAGATGAAAA GCCC AAGCA GGGC AAGGGGTAACATGCA TERM 3503 2226350 - 2226338 - g 83 -4.7 -5.04987 | opp_overlap 2226338, overlap 2226342 AAGAGTTTGAAAAAA GCAGG CGG CCGGC ATCTTCTCTAAGTGA Dole_1839 2226211 - 2226456 + | hypothetical protein Dole_1840 2226453 - 2226860 + | PilT domain-containing protein TERM 3504 2227136 - 2227124 - f 89 -3.4 -5.53991 | opp_overlap 2227108, overlap 2227108 CATTGAGTAAAAAAA CTCA CTGAT TGAG TAAAAGTTGTTGCAT TERM 3505 2227307 - 2227287 - g 71 -7.5 -4.17316 | opp_overlap 2227295 AGGTCGGGAAAACAA CCATCGCCC GGC AGGTGATGG ATAAGCTGCCGTTTC TERM 3506 2228322 - 2228335 + G 83 -5.3 -5.00616 | TTGGTGACAACGGGA TTCCT CTAC AGGAA TTTTTTGCCACGCCG Dole_1841 2227181 - 2228383 + | ATPase Dole_1842 2229816 - 2228563 - | filamentation induced by cAMP protein Fic TERM 3507 2229852 - 2229889 + r 89 -5.8 -5.18371 | TTTTTTAATTTATAT CAGGATATTACAATAT AATTAA ATGTTATAATGTCCTG TTTTGTTTTATGGAC Dole_1843 2231626 - 2230268 - | hypothetical protein Dole_1844 2231955 - 2232209 + | prevent-host-death family protein Dole_1845 2232212 - 2232661 + | hypothetical protein Dole_1846 2232868 - 2233131 + | hypothetical protein TERM 3508 2233257 - 2233277 + G 72 -5.3 -4.49041 | opp_overlap 2233239, overlap 2233253 2233259 GTGGCTTTGCGCTGC GGCCACCGA GTT TCAGTGGAC TTTGATTTTTTCTCT Dole_1847 2233128 - 2233811 + | hypothetical protein TERM 3509 2234290 - 2234311 + G 71 -10.2 -3.54424 | opp_overlap 2234287 2234288 GGAGCGGGTAAAGGC CATCACGG GCCGGG CCGTGATG TTTGAAAAGGTGGAC Dole_1848 2234150 - 2235163 + | UDP-glucose 4-epimerase TERM 3510 2236481 - 2236510 + G 86 -9.1 -4.59773 | GGGGTCATCATCTTC GGCGAGCCGGGCA CCAA TGCCCAGCACTCC TTTTTCCAGCTGGCC Dole_1849 2235341 - 2236981 + | glucose-6-phosphate isomerase Dole_1850 2238198 - 2237185 - | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 3511 2237244 - 2237257 + g 87 -9.5 -4.56597 | opp_overlap 2237242 2237244 CAAGGCCCAGGAACA GGGCG GTAT CGCCC TTTTTGAACCGGCCC TERM 3512 2238312 - 2238278 - R 85 -5.7 -5.07652 | opp_overlap 2238299 TGGGTGAAAATAAAA TCCCGGTCCCT TTTTGGTGTTTCC CGGGACCGGGA TTCTGATTATATACG Dole_1851 2239282 - 2238344 - | hypothetical protein TERM 3513 2238828 - 2238816 - G 70 -4.8 -4.5442 | TGCTCAATGATAAAA TCCG AACCG CGGA CCCCCACAACAGAGG TERM 3514 2239088 - 2239060 - G 79 -7.4 -4.56597 | gap 1, opp_overlap 2239061, overlap 2239061 GGCTTCGGGTAAAAA GGGTGTCGCCGTT ATAG AGCGGCAAC-CCC TTTTTCGCCTCATAC TERM 3515 2239061 - 2239088 + g 83 -7.6 -4.63527 | opp_overlap 2239060 2239061 GCTTCGGGTAAAAAG GGTGTCGCCGTT ATAG AGCGGCAACCCC TTTTTCGCCTCATAC Dole_1852 2240593 - 2239745 - | hypothetical protein TERM 3516 2240187 - 2240175 - G 91 -4.7 -5.60993 | TTTTTTACAAAAAAA CGGGC CTT GCCTG TCAGCAGGTTGACCA TERM 3517 2240411 - 2240427 + g 78 -6.5 -4.57073 | CATGATAAAGGCCTT TCCGTGC ACC GTGCGGA TTTTTCCCACCGGTA Dole_1853 2242129 - 2240621 - | TPR repeat-containing protein TERM 3518 2242015 - 2242004 - G 70 -4.4 -4.42806 | TGATTCGTAAAGAAA GACA CCCG TGTC AAAAGCCATCCTGCC Dole_1854 2243510 - 2242146 - | adenylosuccinate lyase Dole_1855 2244306 - 2243527 - | peptidase A24A domain-containing protein TERM 3519 2243599 - 2243638 + g 80 -5.1 -4.87665 | gap 1, opp_overlap 2243586 2243584, overlap 2243604 GACAATGGCGCCCAT GGACA-GAAACGGGCC GAACGGCAG GGCCAGTTTCATGTTC TTTTTCTGCATCGCC TERM 3520 2244286 - 2244274 - G 73 -3.3 -4.85782 | CGCGCCAAAAACAAA CAGCA CCG CGCCG ATAAGGGTTTCCGGT TERM 3521 2244361 - 2244378 + H 76 -8.3 -4.07246 | opp_overlap 2244362, overlap 2244362 CCTTCGGCTCAATGA AGCCGGC GTAT GCCGGCC TTTCGTTTCCGGTCA TERM 3522 2244377 - 2244362 - H 82 -11.8 -3.33696 | opp_overlap 2244362 2244361 CTTCGGCTCAATGAA GCCGGC GTAT GCCGGC CTTTCGTTTCCGGTC TERM 3523 2244362 - 2244377 + H 78 -11.8 -3.03865 | opp_overlap 2244362, overlap 2244361 CTTCGGCTCAATGAA GCCGGC GTAT GCCGGC CTTTCGTTTCCGGTC TERM 3524 2246616 - 2246597 - g 70 -4.2 -4.58663 | opp_overlap 2246599, overlap 2246599 AGCAGCCTGGAAAAA TACCTGGG CGTG CCCAAGTT TATTCCCGAAATGGA TERM 3525 2247095 - 2247085 - g 70 -2.4 -4.82901 | opp_overlap 2247085 GGTGCCGGAGAAAAA CCGC AAA GAGG TTTCTGAAATTCCCA Dole_1856 2244812 - 2247274 + | ATP-dependent protease La TERM 3526 2247265 - 2247255 - f 77 -8.2 -4.21812 | TGCCACGCAAAACAA CCGG AAC CCGG AAAAAGTGAAGCTGC Dole_1857 2247271 - 2247954 + | peptidase M22 glycoprotease TERM 3527 2248714 - 2248670 - f 89 -5.7 -5.24129 | opp_overlap 2248676, overlap 2248676 TTCGCGGATAAAAAA GGGAAATCCCGGATCGAAACA ACT TGTTTTGGTCCGGGATTTTTT TTTGCCCGGACCCCA TERM 3528 2248676 - 2248708 + F 100 -17.9 -6.06723 | opp_overlap 2248670 2248676 GATAAAAAAGGGAAA TCCCGGATCGAAACA ACT TGTTTTGGTCCGGGA TTTTTTTTTGCCCGG TERM 3529 2248708 - 2248676 - f 100 -13.5 -4.08285 | opp_overlap 2248676, overlap 2248670 GATAAAAAAGGGAAA TCCCGGATCGAAACA ACT TGTTTTGGTCCGGGA TTTTTTTTTGCCCGG Dole_1858 2248752 - 2249012 + | hypothetical protein TERM 3530 2249928 - 2249903 - g 77 -8.1 -4.34402 | overlap 2249905 CCCTGGAGATTAAAA GCCGGCCGACC GACT GGCTGGCCGTC AACCTGAAGCCTTTT Dole_1859 2249026 - 2251086 + | TonB-dependent receptor plug TERM 3531 2251180 - 2251152 - f 100 -17.5 -4.11394 | opp_overlap 2251152 2251152, overlap 2251157 AGGCCACCTCTAAAA GGAAAGGCCCGCA TGG TGCGGGCCTTTTC CTTTCTTTTTCCCCA TERM 3532 2251152 - 2251180 + F 100 -19.7 -3.50746 | opp_overlap 2251152 2251157, overlap 2251152 AGGCCACCTCTAAAA GGAAAGGCCCGCA TGG TGCGGGCCTTTTC CTTTCTTTTTCCCCA TERM 3533 2251152 - 2251181 + F 100 -17.3 -4.86385 | gap 1, opp_overlap 2251152 2251157, overlap 2251152 AGGCCACCTCTAAAA GG-AAAGGCCCGCA TGG TGCGGGCCTTTTCC TTTCTTTTTCCCCAT TERM 3534 2251175 - 2251157 - f 100 -16 -4.20136 | opp_overlap 2251152 2251152, overlap 2251152 ACCTCTAAAAGGAAA GGCCCGCA TGG TGCGGGCC TTTTCCTTTCTTTTT TERM 3535 2251350 - 2251362 + F 90 -7.7 -5.0925 | GCAAAGCTCATATCC GGTTG TTA CAACC TTTTTAATTTTCGGG TERM 3536 2251458 - 2251445 - g 77 -2.3 -5.15969 | CGGGAACTTAAAAAA GAGGC CAGG GCCTT TGTGCGCGAAGAGAT Dole_1860 2251400 - 2252671 + | acyl-CoA dehydrogenase domain-containing protein TERM 3537 2252784 - 2252801 + F 70 -9.9 -3.14961 | overlap 2252783 2252781 GAAAGATGGTCTCCT TTGAGGC GGCA GCCTCAA TATGTTAGTGATAAT TERM 3538 2253159 - 2253148 - g 73 -3 -4.72556 | opp_overlap 2253152 CTAAAAACGACAAAA TTGA TGCG TCAA AGTTGGTGCAATTAT TERM 3539 2253185 - 2253198 + G 70 -2.3 -4.72272 | overlap 2253186 ATTATTGAGGGCCGG CCTCC TGAA GGAGA TTTTTCATACCAACG Dole_1861 2252856 - 2253851 + | hypothetical protein TERM 3540 2254484 - 2254500 + G 70 -3.6 -4.56597 | GCGTACACTGATCAT GGATGC CGCGT GCAGCC TTTTTGCGAAAAAAG Dole_1862 2254410 - 2255027 + | TetR family transcriptional regulator Dole_1863 2255311 - 2255039 - | hypothetical protein Dole_1864 2255620 - 2255312 - | hypothetical protein Dole_1865 2258251 - 2255651 - | pyruvate phosphate dikinase PEP/pyruvate-binding TERM 3541 2256956 - 2256943 - G 75 -5.2 -4.56597 | overlap 2256944 TGGTGCTTTCAAAAA CGCG CAGCAT CGCG CCTTCAAACTCCCTG Dole_1866 2259202 - 2258270 - | UspA domain-containing protein TERM 3542 2258474 - 2258498 + g 80 -9.9 -4.18018 | opp_overlap 2258472, overlap 2258455 GTCTTTTTCAATACC GGCCTTTGCCA GCA TGGCGGCGGCC TTTTCCATGAACCCG TERM 3543 2259025 - 2259043 + g 72 -9.5 -3.75169 | CCAGCTTGTCCAGTT CGGCCCT TGCCT GGGGCCG TTTCATGGCCTCATC TERM 3544 2259272 - 2259293 + H 89 -3.6 -5.58209 | ACCCGGTAATTCATG GCGAACGG CACGGA CCGTCTGC TTTTTTTGCCTTTGC Dole_1867 2259399 - 2259650 + | hypothetical protein TERM 3545 2260045 - 2260059 + G 76 -7 -4.52589 | opp_overlap 2260045 2260043 CCGCGCAAGGGAAGA CGGCTG GAT CCGCCG TTTTATCTCACGGGC TERM 3546 2261386 - 2261399 + G 74 -2.4 -4.9072 | opp_overlap 2261386 CCGGTATTACAGGAA CAAG GCCACG CTTG TTATTTTTTCTTTGT Dole_1868 2259662 - 2261824 + | glycosyl transferase family protein TERM 3547 2262629 - 2262608 - g 85 -2.9 -5.47159 | opp_overlap 2262613, overlap 2262610 2262613 2262614 CCTCAACACAAAAAA GACAAGGGC AACA GCCCTTCTG TGCCTAGGAAGTGTC TERM 3548 2262624 - 2262613 - g 71 -7.2 -4.24741 | opp_overlap 2262613, overlap 2262610 2262608 2262614 ACACAAAAAAGACAA GGGC AACA GCCC TTCTGTGCCTAGGAA Dole_1869 2261964 - 2263439 + | hypothetical protein TERM 3549 2265100 - 2265081 - g 78 -8.6 -4.1337 | TGAGACGATAAACAA CGACGATG CCGA CATCATCG TGTCGGCGGACGCAC Dole_1870 2263492 - 2265267 + | beta-lactamase domain-containing protein TERM 3550 2265320 - 2265336 + T 79 -2.1 -5.42198 | opp_overlap 2265296, overlap 2265319 2265316 GTCTGGGCCCAGACC GGAGCCG CTT CGTGTCC TTTTGTTTTTTGAGA Dole_1871 2266139 - 2265396 - | hypothetical protein Dole_1872 2267113 - 2266280 - | hypothetical protein Dole_1873 2269535 - 2267442 - | radical SAM domain-containing protein TERM 3551 2268096 - 2268112 + g 86 -5.7 -5.04987 | overlap 2268094 2268097 CTCCCAGATATTGAG CCGGTCG TAC CGGCCGC TTTTTTCGCGCTCTT TERM 3552 2268537 - 2268561 + g 70 -5 -4.51363 | gap 1, opp_overlap 2268537 2268536 2268539, overlap 2268539 CGTATCCAGAAAATT GATCATG-CCG CAGG CGGACATGACC TTTTCATCTTTCATG TERM 3553 2269474 - 2269490 + g 84 -2.1 -5.40474 | overlap 2269475 GCTCCGGGCATGCCC ACCAGCA GCA TGCGGGG TTTTTTTGAAAGGGT TERM 3554 2269847 - 2269827 - H 74 -11.1 -2.83903 | opp_overlap 2269826, overlap 2269824 2269823 CGTGTTAAAAACCGA CCGGCCGAT TGG ATCGGCAGG GTGCTTCAACACGAA TERM 3555 2270012 - 2270041 + G 71 -7 -4.15044 | gap 1, overlap 2270038 AACAAAAACTTCATG CGCCTGCCCCTGG GCGAA CC-GGTGCTGGCG TTTCTTAAAAAGGCC TERM 3556 2270811 - 2270783 - g 84 -4.3 -5.30155 | overlap 2270785 GCACGAATGAAAAAA TACCGGGGCCTGC AAA GCGTGGCCCGGTC CAACTTTGTGGCGCG TERM 3557 2270809 - 2270785 - g 74 -6.9 -4.27681 | overlap 2270783 ACGAATGAAAAAATA CCGGGGCCTGC AAA GCGTGGCCCGG TCCAACTTTGTGGCG Dole_1874 2269958 - 2271046 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3558 2271244 - 2271208 - T 77 -4.4 -5.0538 | gap 2, overlap 2271209 CTTCATCTGAAAAAA CCGCCCTCGCTCGGCTGC GCC GCAACGG-GCAAGAG-GG TCGGCCATTAATCTT Dole_1875 2272847 - 2271324 - | polymorphic membrane protein Chlamydia TERM 3559 2271912 - 2271931 + g 76 -3.5 -5.00196 | opp_overlap 2271912 2271910 GTGGTTAAAAATACA GTTCACC AGTTGC GGCGAAC TTTTATTGTTTGCAA TERM 3560 2273033 - 2273057 + r 71 -4.8 -4.56597 | TTTGTGTTGAAGCAC CCTGTCGACC CAATC GGCCGGCCGG TTTTTAACACAAAGA Dole_1876 2275494 - 2273248 - | heavy metal translocating P-type ATPase TERM 3561 2273651 - 2273664 + g 78 -3.1 -5.11112 | TTCTTCTGAAGGTCT GCAAT GGCC GTTGC TTTTTCTTCAGGTTT TERM 3562 2274058 - 2274076 + g 74 -11.6 -3.53563 | opp_overlap 2274049 2274050 CAGAAACCGGTCCCG GGCCGCGG AGA CCACGGCC TTTCCCACCGGATGT TERM 3563 2274599 - 2274627 + g 72 -5.1 -4.56775 | opp_overlap 2274582, overlap 2274595 CCGTCGTTGTTGATG GTGCCGCCCACCA CCT TGTTGCCCGGCGC TTTTTCCACGGGAAT TERM 3564 2274769 - 2274784 + g 72 -4.6 -4.57073 | opp_overlap 2274768 2274770, overlap 2274756 2274770 2274782 GTCCCCGATATCAAC AGGGGT TTCG ACCCCG TTTTTGAGCACAATG TERM 3565 2275095 - 2275072 - G 75 -8.8 -4.08216 | gap 1 CCACCCGGTGTAAAA CTGGACC-GGC GTG GCCAGGGCCAG AAAGAGCCAGTTCAT TERM 3566 2275385 - 2275408 + g 100 -11 -5.06414 | gap 1, opp_overlap 2275383 2275380 2275379, overlap 2275389 2275404 GTGGCAAAATTCACC GACGCGCTGGC CAC GCCGGCG-GTC TTTTTGTTCAAGGCC Dole_1877 2275726 - 2275523 - | heavy metal transport/detoxification protein TERM 3567 2275793 - 2275812 + H 71 -8.6 -3.66654 | overlap 2275808 CGGCTTCCACTTTTT TGTCTGTC ACCT GACAGGCA TTTCGCATTCAGGTG TERM 3568 2275846 - 2275832 - H 74 -10 -3.57792 | opp_overlap 2275808 GCATTCAGGTGGAAA TGCCCA TTT TGGGCA AAATCACCAGCTGCA TERM 3569 2276354 - 2276373 + G 79 -7.1 -4.66537 | AATGAAAGCGCGGGG CCGTCCG AAACGA CGGATGG TTTTCTGTTGGACCA TERM 3570 2276547 - 2276534 - g 82 -6.7 -4.75372 | ACTATGGAGGAAAAA GAGGA CCAT TCCTC CCTGCCCGGCGGGTT TERM 3571 2276700 - 2276676 - g 100 -4.2 -6.15828 | overlap 2276678 GGCAGCAAAAAAAAA CGCGACTGGT GCTCA ACCAGTTGGG CGCGGACCAGATTTT TERM 3572 2276938 - 2276916 - g 89 -6.2 -5.1101 | CCATGATGGAAAAAA TGGCCCGG TCCGCTG CCGGGGCA AAACGGATGGAAAAG Dole_1878 2276222 - 2277049 + | cyclic nucleotide-binding protein Dole_1879 2278751 - 2277060 - | hypothetical protein TERM 3573 2277148 - 2277166 + g 71 -10.2 -3.62418 | TTCCCCATGCTTCCC GAGGCCAG GGT CTGGCCGC TTTCCAATGGATTGT TERM 3574 2278710 - 2278724 + g 87 -7 -4.92314 | overlap 2278712 GGTTTTTATGGCCCG GACCGC GTT GCGGGC TTTTTGTGACTTGGT Dole_1880 2279709 - 2278858 - | apurinic endonuclease Apn1 TERM 3575 2279217 - 2279272 + g 78 -8.9 -4.18018 | overlap 2279219 2279220 CTTCTACCTGATCGA TGACGCGGGCCAGGTGCTCGAACC-GG TGGC CCAGGTTGGTGC-CCTGGCCGGCGGTG TTTTCAATGACCGCG TERM 3576 2279219 - 2279270 + g 78 -11.5 -3.69216 | overlap 2279217 2279220 TCTACCTGATCGATG ACGCGGGCCAGGTGCTCGAACC-GG TGGC CCAGGTTGGTGC-CCTGGCCGGCGG TGTTTTCAATGACCG TERM 3577 2279220 - 2279269 + g 83 -15 -2.81208 | overlap 2279219 2279217 CTACCTGATCGATGA CGCGGGCCAGGTGCTCGAACC-GG TGGC CCAGGTTGGTGC-CCTGGCCGGCG GTGTTTTCAATGACC TERM 3578 2279450 - 2279440 - G 77 -2.4 -5.15634 | opp_overlap 2279413 CATTTCATCAAAAAA GGCG GTT CGCG ATTTTTTAAGGTTAT TERM 3579 2279632 - 2279617 - G 71 -10.4 -3.53012 | overlap 2279626 2279627 CTGGTTTTTGGTAAA CAGGGC AAAG GCCCTG GCCCTGATCCGGGCC Dole_1881 2279890 - 2280630 + | 1-acylglycerol-3-phosphate O-acyltransferase Dole_1882 2281057 - 2280650 - | type IV pilus assembly PilZ TERM 3580 2281168 - 2281145 - H 73 -5.2 -4.63586 | overlap 2281147 2281148 2281150 AGATGAGAGACAAAA TAGCACGGGC AAAC ACCCGTGTCA ATCATCCTTTATTTG TERM 3581 2281878 - 2281890 + G 81 -3.3 -5.32565 | AACTACCTGGTTACC CTGTG CGA CGCGG TTTTTTCCTTGCTTG TERM 3582 2282100 - 2282068 - g 83 -5.6 -5.00895 | gap 1 TTCAGGAGATAAAAA CCCGG-AAACCTG ATCTGCTG CCGGTTTACCGGG TAATGGGGCTTCATA Dole_1883 2281320 - 2282210 + | 6-phosphogluconate dehydrogenase NAD-binding TERM 3583 2282471 - 2282456 - T 77 -10.4 -3.54424 | opp_overlap 2282455 CTTGATCTTGCGAAA TCCCGC CATG GCGGGA CTGAATTGGAAACCT Dole_1884 2283717 - 2282575 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3584 2283002 - 2282982 - G 71 -8.2 -4.01381 | ATTTAATGGAAACAA TGGCCGCC TGAAG GGCGTCCA GCCGAAAATTGCCGC Dole_1885 2287262 - 2283714 - | DNA polymerase III, alpha subunit TERM 3585 2283840 - 2283830 - G 74 -6.8 -4.27316 | opp_overlap 2283830 CGCTGTAACCCAAAA GGTC GTT GACC TTGTCGAAGAGCGCG TERM 3586 2284429 - 2284417 - G 75 -9.1 -4.07687 | ACCTCTTTTTCAAAA GCCAG CCG CTGGC GGTCAGACCACTCCG TERM 3587 2284709 - 2284695 - G 71 -7 -4.13805 | overlap 2284696 AAAAATCGAGACAAA CCGGCC GTT GGCCCG CCGCTCCTCCACAAT TERM 3588 2285815 - 2285827 + g 72 -4.8 -4.71426 | GGCTCTTCGGCCAGG GCCT CGTCA AGGC TTTTGTTCATGGGAA TERM 3589 2286278 - 2286294 + g 87 -9.3 -4.56597 | opp_overlap 2286288 GCCGGTCGTAGGCCT CCCGGTC AAA GTCCGGG TTTTTCCGGGCCACG TERM 3590 2286776 - 2286766 - G 87 -8.2 -4.82901 | opp_overlap 2286765, overlap 2286767 2286768 GCCTCCTGATAAAAA CGGG CCG CCCG GTCAGCGGCCTCGGT TERM 3591 2286919 - 2286906 - G 70 -4.5 -4.46212 | overlap 2286918 GGGCTTATGATAAAA CCCCT TAAG AGAGG CGATGCTGGCCAGGT Dole_1886 2288929 - 2287472 - | inosine-5'-monophosphate dehydrogenase TERM 3592 2288359 - 2288372 + g 75 -3.7 -4.82901 | overlap 2288360 TCATGGTGATCATAC CGGCC AGGC GGCCC TTTTTATCCACCACC Dole_1887 2289214 - 2288963 - | hypothetical protein Dole_1888 2289261 - 2289869 + | Sua5/YciO/YrdC/YwlC family protein TERM 3593 2290321 - 2290297 - g 90 -2.8 -5.71983 | gap 1, opp_overlap 2290314 2290316 TCAACCACAAAAAAA TGGACC-GCAT GCTC AAGCTGGCCCA TGAGCAGCGCCTGCC TERM 3594 2291095 - 2291070 - g 75 -3.9 -4.81249 | gap 1, overlap 2291071 2291072 CCGGAAATGGAAAAA CGGGCCCAGGTG CGC CACGTGTGCC-G AATGTTTGTGGTGGG Dole_1889 2289945 - 2291504 + | propionyl-CoA carboxylase TERM 3595 2291795 - 2291758 - g 93 -12.6 -4.14615 | gap 1, opp_overlap 2291790 2291792, overlap 2291750 AAAAAGCGGCGAAAA CGGGCGGCCG-GCTCCG GCAAA CGGCACACGGCCCCCCG GCTGGTGGTCAGCGA TERM 3596 2293016 - 2293003 - g 76 -3.1 -4.90477 | gap 1 CAGAAAAAAGTAAAA CA-GGC GGC GCCGTG GGTGAGGTTCGGGTA Dole_1890 2291737 - 2293059 + | radical SAM domain-containing protein Dole_1891 2294790 - 2293207 - | GCN5-related N-acetyltransferase Dole_1892 2295324 - 2294815 - | hypothetical protein TERM 3597 2295039 - 2295082 + g 70 -3.6 -4.56597 | overlap 2295042 GGATATGCATGGGCA GGGCGCAGCCGTCAGCCT TCAGAAAC AGGCAGTCGGCCCCGTTC TTTTTCAGCACCCGG Dole_1893 2296691 - 2295327 - | lysine 2,3-aminomutase YodO family protein Dole_1894 2297596 - 2296907 - | hypothetical protein TERM 3598 2297920 - 2297944 + H 71 -6.9 -4.18018 | CTGGCACATTGCACG GCGGCACGGAG ACC CAGCGGGCCGC TTTTCCCTGAAACCA TERM 3599 2298053 - 2298023 - g 74 -11.1 -3.60627 | TCATGCCATTTTAAA GGCCCGGCCTGAA TTGTC TCCAGACCTGGCC GCCTGCATTCATGTC TERM 3600 2298460 - 2298439 - g 79 -7.1 -4.67353 | GCAGGCAGGCAAAAA CCGTGGTCC GCCA GGTCCTCGG CCCGGACGTCTGCGT Dole_1895 2297964 - 2300060 + | short chain dehydrogenase TERM 3601 2300099 - 2300121 + G 72 -8.4 -3.85817 | opp_overlap 2300085 ATCGGCATTGCCTGC CGGTCGTC ATCCGCC GGCGACCG TTTCTACCGGGACCT Dole_1896 2300069 - 2300452 + | glyoxalase/bleomycin resistance protein/dioxygenase Dole_1897 2300467 - 2301351 + | aldolase Dole_1898 2301752 - 2301937 + | hypothetical protein TERM 3602 2302682 - 2302672 - T 83 -4 -5.5112 | TCCATCAATAAAAAA CATT ATC AATG GACTGTAGATAAGCA Dole_1899 2304151 - 2302880 - | YD repeat-containing protein TERM 3603 2303765 - 2303786 + g 71 -10.3 -3.59966 | opp_overlap 2303765, overlap 2303758 GGTCACTCCAACGGA TGACAACAA TTCG TTGTTGTCA TTGTATGTCCAGTCT TERM 3604 2304336 - 2304355 + r 78 -5.6 -4.87291 | opp_overlap 2304323 ATCCCCGACACTATG CGGTCGGC GCCG GCTGGCTG TTTTTCCTTAACATC Dole_1900 2306100 - 2304331 - | D-aminoacylase domain-containing protein TERM 3605 2305169 - 2305184 + g 72 -6 -4.33739 | ATGCCCATGCCGATA CCGGCC TGCC GGACGG TTTTCACCTTTTTTA Dole_1901 2306382 - 2306618 + | prevent-host-death family protein TERM 3606 2306598 - 2306613 + F 73 -7.6 -4.07618 | ATTTTAGAGGAGCGT GAACGT GAAA ACGTTC TTTGATTCTTCAGCA Dole_1902 2306602 - 2307015 + | hypothetical protein TERM 3607 2307066 - 2307028 - f 100 -16.3 -3.66028 | gap 2, opp_overlap 2307026 TAGAATGGCCAACAA TTCACCGCACCAGACCGCT TAC AGCG-TCTGGTG-GGTGAA GGTGTTAAGCCGCGG TERM 3608 2307981 - 2307963 - g 93 -5.9 -5.40072 | overlap 2307966 GGGGCCGTAAAAAAA CAGGCCG GACAG CGGCATG GACGACCGTGAATCA Dole_1903 2307144 - 2307992 + | methyltransferase type 11 Dole_1904 2308147 - 2308452 + | hypothetical protein Dole_1905 2309030 - 2308491 - | NUDIX hydrolase Dole_1906 2309839 - 2309027 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 3609 2309481 - 2309468 - G 74 -2.3 -5.00616 | opp_overlap 2309453 GCCTTTTGCAAAAAA GCGCT CTTC ACCGC CAGCGGAAAAAAGAT Dole_1907 2310782 - 2309943 - | phosphoribosyltransferase TERM 3610 2310141 - 2310157 + g 82 -10.1 -4.11216 | opp_overlap 2310140 2310141 TTCCTTTCTGGAAAG CTCGGTC TGG GACCGGG TTTTAACGGTCCGCA Dole_1908 2312028 - 2310787 - | isocitrate dehydrogenase, NADP-dependent TERM 3611 2311480 - 2311510 + g 75 -3.8 -4.72272 | CTTGATGCCGATGCC CGAACCGGCGGC CACGGAA GCCCCCAGCTCG TTTTTCATGAACGCG TERM 3612 2312142 - 2312131 - R 91 -7.2 -5.29846 | AATGGCAAACAAAAA CCGG GAGA CCGG CCGACATCAGGTTCT TERM 3613 2312308 - 2312290 - R 71 -10.2 -2.82516 | TGTCGGAGCAGCACA GTCCCGCC GAT GGCGGGAT CAAGGTGACTCGCCC Dole_1909 2313113 - 2312343 - | RNA methyltransferase Dole_1910 2313742 - 2313110 - | guanylate kinase TERM 3614 2313236 - 2313284 + g 80 -10.1 -4.07568 | gap 1, overlap 2313236 2313268 GGCCATCTCCTGTTC G-GCGGCGGCCATGCGGCGTTC AATGGC GTCCGGCGCGTCGCCGCCGCGC TTTTCCAGGCGCCGG TERM 3615 2313684 - 2313671 - G 72 -4.5 -4.56978 | gap 1, overlap 2313673 CGCGGAAACAATAAA CAGCCG TCC CGGC-G CCCTGCTCAGGAGCT Dole_1911 2314048 - 2313755 - | hypothetical protein TERM 3616 2314020 - 2314034 + g 81 -4.3 -5.09895 | opp_overlap 2314020 ATACGATTGCCAAAC CCTAT ATTTA ATAGG TTTTTTCGGTGCATG TERM 3617 2314241 - 2314252 + r 78 -5.8 -4.67234 | TGCCACGTTCTGCAC CTGC TCCC GCAG TTTTTCCAGTTCGGT Dole_1912 2315107 - 2314223 - | hypothetical protein TERM 3618 2314389 - 2314419 + g 83 -5.2 -4.98255 | overlap 2314384 CACGATTCGCCATCG GCCATGGCGGCCCG GAA CTGGGCGATGTGGC TTTTTATCCTTACGA TERM 3619 2314996 - 2314976 - G 83 -14 -3.53343 | AATGGCGGCCTCAAA CTGCCGGC AGTTG GCCGGCAG GCGAAGCACCAGATC TERM 3620 2315061 - 2315073 + g 86 -5.5 -5.03314 | opp_overlap 2315061, overlap 2315062 GACGCGGACAACCCA TCGTG TTC CACGG TTTTTTCCGCATACG Dole_1913 2315802 - 2315263 - | GTP-binding protein Dole_1914 2315987 - 2315811 - | hypothetical protein TERM 3621 2315957 - 2315972 + g 77 -2.6 -5.14965 | ATTTGGGACAGGCCA GAATTT CGAG AAGTTC TTTTTTGATGGACAT TERM 3622 2316111 - 2316135 + r 70 -10 -3.17714 | overlap 2316114 GCATTCACTCGTCAC TGCGGCGTAC GACCA GTACGCCTCA TTCCTCGGGATTTGC TERM 3623 2316114 - 2316132 + r 71 -10.3 -2.78395 | overlap 2316111 TTCACTCGTCACTGC GGCGTAC GACCA GTACGCC TCATTCCTCGGGATT Dole_1915 2317041 - 2316229 - | Fe-S cluster domain-containing protein TERM 3624 2316502 - 2316520 + g 72 -4.4 -4.57837 | overlap 2316515 GTCTTCAAACAGGTT GGTGTAGG TAT CCGCCACC TTTTTGAGGGGCTGT TERM 3625 2316755 - 2316807 + g 81 -4 -5.15969 | opp_overlap 2316757 2316761, overlap 2316757 2316760 2316761 AGCCGCCCGTTGGCA AAGACACCGCCGA-CGCGCCTGGCCG CCT CGGCCAGGT-CGATCTGCCGGATCTG TTTTTTGAGTTGGGC TERM 3626 2316845 - 2316855 + g 90 -3.2 -5.75342 | overlap 2316839 TCGTCCATGCCGTCG CTGA TGG TCGG TTTTTTTTCCACAAA TERM 3627 2317268 - 2317244 - R 70 -10 -3.17714 | overlap 2317247 GCAAATCCCGAGGAA TGAGGCGTAC TTGTC GTACGCCGCA GTGACGAGGGGTGCA TERM 3628 2317265 - 2317247 - R 71 -10.3 -2.78395 | overlap 2317244 AATCCCGAGGAATGA GGCGTAC TTGTC GTACGCC GCAGTGACGAGGGGT Dole_1916 2318394 - 2317324 - | hypothetical protein TERM 3629 2317895 - 2317878 - G 100 -8.3 -5.75342 | TCCGTTCAAAAAAAA GCCGCAG GGTC CGGCGGC CGGCCGCGTTAAACA TERM 3630 2318331 - 2318358 + g 78 -4.1 -5.00884 | gap 2, opp_overlap 2318331, overlap 2318308 CGGCATCGGGATGAA GCCCTTCGTCCCG AATC CGGGCC-A-GGGC TTTTTTGCCGGCCAT Dole_1917 2319248 - 2318421 - | short chain dehydrogenase TERM 3631 2318969 - 2318991 + g 83 -13.4 -3.61715 | GGACCTCGGCAATGC CGCCGGCG GCGGCCA CGCCGGCG TTGTTCACGACAATG Dole_1918 2320003 - 2319245 - | short chain dehydrogenase TERM 3632 2320104 - 2320122 + r 71 -10.3 -2.78395 | overlap 2320101 TTCACTCGTCACTGC GGCGTAC GACGA GTACGCC TCGTTCCTCGGGATT Dole_1919 2321067 - 2320189 - | amidohydrolase 2 TERM 3633 2320395 - 2320355 - G 80 -10.4 -3.95435 | GTTCCGAAAATACAA CGG-TCCGGGCCAAGGGCCG CCA CCGCCCT-GGCCAGAATCCG CTCGCTCACATAACT TERM 3634 2320596 - 2320575 - G 79 -13.7 -3.03124 | gap 1, opp_overlap 2320576 CGGCATGGTTTAACA GGGGCCGGCC GTC GGCCG-CCCC TTTTTTTGCCACGGG TERM 3635 2320576 - 2320596 + g 100 -13.9 -5.40072 | opp_overlap 2320575 GGCATGGTTTAACAG GGGCCGGCC GTC GGCCGCCCC TTTTTTTGCCACGGG Dole_1920 2321844 - 2321203 - | TetR family transcriptional regulator Dole_1921 2323175 - 2321973 - | acyl-CoA dehydrogenase domain-containing protein Dole_1922 2324091 - 2323381 - | phosphoglycerate mutase TERM 3636 2324195 - 2324171 - H 79 -10 -3.91072 | overlap 2324174 GCAAATCCCGAGAAA TGAGGCGTAC TTGTC GTACGCCGCA GTGACGAGGGGTGCA TERM 3637 2324192 - 2324174 - H 72 -10.3 -3.0169 | overlap 2324171 AATCCCGAGAAATGA GGCGTAC TTGTC GTACGCC GCAGTGACGAGGGGT TERM 3638 2324274 - 2324321 + H 95 -12.2 -4.16279 | opp_overlap 2324274 2324291, overlap 2324275 2324284 2324291 TTAGAGGAATCAAAG CGGCTGTCAAGAAAAAACGAAC GAAC GTTCGTTTTTTCTTGTAACCTG TTTTCCGCTGATATA TERM 3639 2324275 - 2324319 + H 93 -13.2 -3.67634 | gap 1, opp_overlap 2324274 2324291, overlap 2324274 2324284 2324291 TAGAGGAATCAAAGC GGCTGTCAAGAAAAAACGAAC GAAC GTTCGTTTTTTCTTG-TAACC TGTTTTCCGCTGATA TERM 3640 2324284 - 2324311 + H 93 -14.4 -3.39289 | opp_overlap 2324274 2324291, overlap 2324275 2324274 2324291 CAAAGCGGCTGTCAA GAAAAAACGAAC GAAC GTTCGTTTTTTC TTGTAACCTGTTTTC TERM 3641 2324304 - 2324291 - H 93 -6.7 -5.4505 | opp_overlap 2324291 2324284 2324275 2324274, overlap 2324274 GCTGTCAAGAAAAAA CGAAC GAAC GTTCG TTTTTTCTTGTAACC TERM 3642 2324291 - 2324304 + H 100 -6.7 -5.55769 | opp_overlap 2324274 2324291, overlap 2324284 2324275 2324274 GCTGTCAAGAAAAAA CGAAC GAAC GTTCG TTTTTTCTTGTAACC Dole_1923 2324372 - 2325148 + | electron transfer flavoprotein alpha/beta-subunit TERM 3643 2325728 - 2325706 - g 100 -6.2 -5.82388 | overlap 2325707 AAAGTTGAAAAAAAA GCGACGGG GTTTTCT CCCGTCGA ATTGACACGGGAAGC TERM 3644 2325727 - 2325707 - g 78 -9.7 -4.06993 | overlap 2325706 AAGTTGAAAAAAAAG CGACGGG GTTTTCT CCCGTCG AATTGACACGGGAAG Dole_1924 2325157 - 2326140 + | electron transfer flavoprotein alpha subunit TERM 3645 2326144 - 2326134 - f 73 -4.6 -4.82667 | opp_overlap 2326131 2326138 TGACGAGATGAAAAA GGCC TGA AGCC TTCATTCCTTATTTA TERM 3646 2326521 - 2326511 - f 73 -2.4 -5.09245 | CCAAAACCATAAAAA GGAG ATA CACC ATGAAAACCGTTTTC Dole_1925 2326522 - 2327358 + | phosphate binding protein Dole_1926 2327470 - 2328399 + | phosphate ABC transporter, inner membrane subunit PstC TERM 3647 2328783 - 2328803 + G 84 -2.4 -5.43414 | overlap 2328787 GGTTCCCTCCATCGT GTTCGGCC TGTTC GGCCTGGC TTTTTTCTGTATCGT Dole_1927 2328409 - 2329293 + | phosphate ABC transporter, inner membrane subunit PstA TERM 3648 2329934 - 2329956 + G 78 -7.6 -4.42974 | overlap 2329936 AATATGCAGCAGGCG GCCCGGGTGT CGG ACACCACGGC TTTCTTCTATATAGG Dole_1928 2329307 - 2330062 + | phosphate ABC transporter, ATPase subunit TERM 3649 2330679 - 2330646 - g 72 -6 -4.37886 | overlap 2330671 2330672 GCATGGTTCAGAAAA GCCTCAACGCCTTT GTGCAG AAAGATGCCGAGGC GGCCAAGGCGGTGCT Dole_1929 2330249 - 2330929 + | phosphate uptake regulator, PhoU Dole_1930 2330942 - 2331643 + | two component transcriptional regulator TERM 3650 2331754 - 2331700 - f 100 -21 -3.02144 | opp_overlap 2331704 2331704 2331707, overlap 2331707 GCATGTGTTTCAACA CGAAGAACACGAAGCACACGAAGA TACTTGC TCTTCGTGAACTTCGTGTGCTTCG TGCCCTTCGTGTTAA TERM 3651 2331704 - 2331750 + F 82 -12.4 -3.19157 | opp_overlap 2331700 2331707, overlap 2331704 2331707 GTGTTTCAACACGAA GAACACGAAGCACACGAAGA TACTTGC TCTTCGTGAACTTCGTGTGC TTCGTGCCCTTCGTG TERM 3652 2331704 - 2331759 + F 75 -10.5 -3.36273 | gap 1, opp_overlap 2331700 2331707, overlap 2331704 2331707 GTGTTTCAACACGAA GAACACGAAGCACACGAAGATACTTG CTCTT CGTGAA-CTTCGTGTGCTTCGTGCCC TTCGTGTTAAAAAAG TERM 3653 2331707 - 2331747 + F 81 -12.7 -2.79023 | opp_overlap 2331700 2331707, overlap 2331704 2331704 TTTCAACACGAAGAA CACGAAGCACACGAAGA TACTTGC TCTTCGTGAACTTCGTG TGCTTCGTGCCCTTC TERM 3654 2331747 - 2331707 - f 100 -14.9 -3.82084 | opp_overlap 2331707 2331704 2331704, overlap 2331700 TTTCAACACGAAGAA CACGAAGCACACGAAGA TACTTGC TCTTCGTGAACTTCGTG TGCTTCGTGCCCTTC TERM 3655 2332792 - 2332781 - g 75 -5.8 -4.60889 | opp_overlap 2332782 2332783, overlap 2332771 2332782 2332783 2332785 AATCAGCGGTAAAAA CCGA CCGG TCGG AGGCCGACCTGCCCT Dole_1931 2331844 - 2333619 + | PAS/PAC sensor signal transduction histidine kinase TERM 3656 2334210 - 2334197 - g 70 -3.9 -4.59773 | CCGTATGGTGAAAAA CAAAA AAAT TTTTG ACATGGTTGATGAAA Dole_1932 2333835 - 2336036 + | esterase/lipase-like protein Dole_1933 2336762 - 2336052 - | hypothetical protein TERM 3657 2336731 - 2336743 + g 79 -5.5 -4.73682 | opp_overlap 2336731 ATCACGGGCGATAAC GCGTC GGG GATGC TTTTATATTCTGCGC Dole_1934 2338845 - 2336764 - | elongation factor G TERM 3658 2338093 - 2338077 - G 71 -10.8 -3.53733 | overlap 2338075 CCGATCCCACAAATA CCGGGG TCATC CCCCGG GACAGGGTACCGGTC TERM 3659 2338194 - 2338184 - G 72 -4.6 -4.62336 | AGTTCATCGGAAAAA GCAG AGG CCGC ATCCACCAGGTCTTC Dole_1935 2339462 - 2339034 - | NUDIX hydrolase Dole_1936 2340580 - 2339465 - | DNA repair photolyase-like protein TERM 3660 2339919 - 2339897 - G 80 -9.8 -4.24384 | overlap 2339892 AGGATCAAAATGAAA GGCAACCGGG TAG CCCAGTTCCC GGCAGGCTCTGGCTG Dole_1937 2340666 - 2341304 + | beta-lactamase domain-containing protein Dole_1938 2341462 - 2342196 + | response regulator receiver protein Dole_1939 2343321 - 2342548 - | TetR family transcriptional regulator TERM 3661 2344602 - 2344580 - g 78 -9 -4.16016 | opp_overlap 2344581, overlap 2344581 TGATGCGCGAAGAAA GGCGGCTCAG GTA CTGGGCCGCT TCGGTCCCAAGACAG TERM 3662 2344601 - 2344581 - g 76 -12.5 -3.09288 | opp_overlap 2344581, overlap 2344580 GATGCGCGAAGAAAG GCGGCTCAG GTA CTGGGCCGC TTCGGTCCCAAGACA TERM 3663 2344581 - 2344601 + G 83 -14.7 -3.05384 | opp_overlap 2344581 2344580 GATGCGCGAAGAAAG GCGGCTCAG GTA CTGGGCCGC TTCGGTCCCAAGACA TERM 3664 2345267 - 2345250 - g 100 -6.9 -6.11229 | opp_overlap 2345253 ATCAAAATAAAAAAA GCCGACG GCAC CACCGGC TATGTGTTTAAAGAA Dole_1940 2343735 - 2345303 + | SH3 type 3 domain-containing protein TERM 3665 2345598 - 2345613 + G 72 -6 -4.36914 | overlap 2345599 CTGCCCACCAGGCAC TGGCCG CACC CGGCCC TTTTCTCCCCCACGG TERM 3666 2346622 - 2346599 - g 71 -10.2 -3.54475 | overlap 2346579 2346600 CCGGTCATGACAGAA CGCCGGACCG TCAA CAGCCCGGCA TGGGGTGTGGATGTG TERM 3667 2347075 - 2347060 - g 71 -6.8 -4.12188 | TCAGTATTTTCAAAA CGTCGG TACG CCAACG GCTCCCTATTTTGCC TERM 3668 2347129 - 2347111 - g 78 -6.6 -4.63218 | GCCCTCTCAACAAAA CCCGGCAG CCA CTATCGGG GGAACGGCGTTCGAT Dole_1941 2345450 - 2347726 + | hypothetical protein TERM 3669 2347786 - 2347808 + T 100 -13.4 -5.61881 | opp_overlap 2347775 2347786 AAATCCTTGAAAAAA GGGAGGGACA CAT TGCCCCTCCC TTTTTCTTTTTACGC TERM 3670 2347808 - 2347786 - T 100 -15.6 -5.03747 | opp_overlap 2347786, overlap 2347775 AAATCCTTGAAAAAA GGGAGGGACA CAT TGCCCCTCCC TTTTTCTTTTTACGC Dole_1942 2348605 - 2347844 - | TetR family transcriptional regulator TERM 3671 2348021 - 2348034 + g 87 -9.5 -4.58685 | TGTTCCTCGCAGCTT CCCCG TGAC CGGGG TTTTTACGACCATTT TERM 3672 2351408 - 2351430 + G 90 -7.6 -4.93296 | TCTGTTTATAGCTGA GGGCGCCCTT GGT GAAGGCGCTC TTTTTATAGTGATGG Dole_1943 2349075 - 2353184 + | hypothetical protein TERM 3673 2353194 - 2353212 + F 75 -11.6 -2.64735 | opp_overlap 2353191 GACTGATCACAACGC GCCCCGCC TAT GGCGGGGA TGATATAGCTCGGAT Dole_1944 2353270 - 2354613 + | membrane protein involved in aromatic hydrocarbon degradation Dole_1945 2355165 - 2355698 + | hypothetical protein Dole_1946 2356902 - 2356063 - | prephenate dehydrogenase Dole_1947 2357954 - 2356890 - | chorismate synthase TERM 3674 2358135 - 2358153 + r 72 -10.2 -3.06815 | GGGCGAGTCACCTTG ATCCCGCC ATC GGCGGGAC TGTGTTGCGGGACAT Dole_1948 2358671 - 2358243 - | hypothetical protein Dole_1949 2360022 - 2358751 - | 3-phosphoshikimate 1-carboxyvinyltransferase Dole_1950 2361136 - 2360036 - | prephenate dehydratase Dole_1951 2362142 - 2361150 - | 3-dehydroquinate synthase TERM 3675 2361599 - 2361564 - G 74 -8.3 -4.10331 | gap 1, overlap 2361558 CGAATGAATCAGAAA CAGGGCGCTGCTGCTG TTGCC CACCAGCAT-GCCCTG GCCTTCGGTCATGGC Dole_1952 2362972 - 2362160 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3676 2363011 - 2363044 + r 80 -6.7 -4.8048 | opp_overlap 2363029 2363036, overlap 2363006 2362996 2363012 2363036 CCCGCCGCTGCCGGG TCCCGCGGGTTTT AAAAACAA AAAAGCCGCGGGC TTTTTCGTCTGCCCG TERM 3677 2363012 - 2363043 + r 77 -10.2 -3.47806 | opp_overlap 2363029 2363036, overlap 2363006 2362996 2363011 2363036 CCGCCGCTGCCGGGT CCCGCGGGTTTT AAAAACAA AAAAGCCGCGGG CTTTTTCGTCTGCCC TERM 3678 2363051 - 2363029 - R 100 -11.4 -4.56597 | opp_overlap 2363012 2363011 2363036, overlap 2363036 CGCGGGTTTTAAAAA CAAAAAAGCC GCG GGCTTTTTCG TCTGCCCGCGGCTTT TERM 3679 2363036 - 2363063 + r 93 -12.7 -3.79445 | opp_overlap 2363029 2363036, overlap 2363012 2363011 2363056 TTTAAAAACAAAAAA GCCGCGGGC TTTTTCGTCT GCCCGCGGC TTTAAGTTGCTGGTT TERM 3680 2363063 - 2363036 - R 100 -12.7 -5.93252 | opp_overlap 2363012 2363011 2363036 2363056, overlap 2363029 TTTAAAAACAAAAAA GCCGCGGGC TTTTTCGTCT GCCCGCGGC TTTAAGTTGCTGGTT TERM 3681 2363513 - 2363555 + r 76 -11.4 -2.80537 | gap 1, opp_overlap 2363544, overlap 2363510 2363507 2363512 ACCAGTCTACAGGCA GGCGAACCTGCTGTTTGGC CTTGTT GCGAAACAGCAGGTA-GCC GTTGATTTTGCCGTA Dole_1953 2366375 - 2363496 - | DEAD/DEAH box helicase domain-containing protein TERM 3682 2363660 - 2363674 + g 85 -3.5 -5.40072 | gap 1, overlap 2363665 ACCAGATCAGTGCCT GCAGCC CGTT GGC-GC TTTTTTTCGCGCCCA TERM 3683 2364105 - 2364074 - G 71 -7.8 -4.07568 | gap 1, opp_overlap 2364075 2364097 GGGCCGGTTGCAAAA CCGGGGCCGCGGCCC GTC GTGTC-CGGCTCCGG GCACCGGCTGCCGGT TERM 3684 2364097 - 2364130 + g 83 -14.5 -3.06815 | gap 1, opp_overlap 2364074, overlap 2364118 GCGGCCCGTCGTGTC CGGCTCCGGGCACCGG CTG CCGGTGGCCGG-GCCA TCTGTTCCAGCAGGT TERM 3685 2365605 - 2365615 + g 70 -2.4 -4.82901 | overlap 2365604 GTGACGTTTTCCCCT GGGG GCC CCGC TTTTTGTGACCGCCG TERM 3686 2365633 - 2365662 + g 85 -14.9 -3.06261 | TTTGTGACCGCCGTT GTCGGCCGGCCGG TGAG CTGGCCGGCCAGC TCTTCCGGGTTGGCA TERM 3687 2366189 - 2366163 - G 79 -13 -3.28712 | GTTCTCTCCTGACAA CACCCGGCCAAT GGC ATCGGCCTGGTG GGCATACAGCCCTTC TERM 3688 2366597 - 2366585 - g 76 -3.4 -5.01732 | AAGGGGTCGAAAAAA TGGA GACCA TCCA GAAGGCCAGAGACAC Dole_1954 2366482 - 2366694 + | hypothetical protein Dole_1955 2366891 - 2367496 + | hypothetical protein TERM 3689 2367685 - 2367707 + T 100 -16.3 -5.74684 | opp_overlap 2367685 AGAAACACAAAAAAA GGGGGGCAC CGCCA GTGCCCCCC TTTTTGTTTTTCTTC TERM 3690 2367707 - 2367685 - T 100 -17 -5.90231 | opp_overlap 2367685 AGAAACACAAAAAAA GGGGGGCACC GCC AGTGCCCCCC TTTTTGTTTTTCTTC Dole_1956 2368600 - 2367740 - | hypothetical protein TERM 3691 2367765 - 2367787 + g 77 -7.6 -4.37886 | opp_overlap 2367756 ACCAGATCGGCCATG GCCTGAGCCA CAC TGGCAAAGGC TTTTGTCACCGGTGA TERM 3692 2368627 - 2368643 + r 76 -2.2 -5.2015 | TTTTATATCAACCCT GGCG TTATTTTTC CGCC TTTTTATCTTCTTCC Dole_1957 2369047 - 2368631 - | hypothetical protein TERM 3693 2368761 - 2368738 - G 72 -6.7 -4.37092 | gap 1, overlap 2368705 2368741 ATTTGCCGCAGAAAA GCA-CGGCCC CGTCC GGACCGGTGC GAAGATAGTTGCCGC Dole_1958 2369929 - 2369216 - | enoyl-CoA hydratase/isomerase Dole_1959 2370322 - 2371098 + | glucose-1-phosphate cytidylyltransferase TERM 3694 2371771 - 2371747 - g 80 -2.1 -5.20735 | TCAACAAAAAAGAAA CCATGAAAATC CGT AACCCCCATGG ACTCCGTCCCTGGCA TERM 3695 2372003 - 2371965 - g 85 -15.2 -3.15544 | opp_overlap 2371963 2371962 2371973 2371983 TTTGATGTGGACCAA CAGCCGGACCAGCCCCAC GAG GCCGGTCTGCTCCGGCTG GACTCTTCTAAAGCC Dole_1960 2371095 - 2372183 + | CDP-glucose 4,6-dehydratase Dole_1961 2372171 - 2372746 + | dTDP-4-dehydrorhamnose 3,5-epimerase Dole_1962 2372743 - 2373966 + | C-methyltransferase TERM 3696 2374091 - 2374110 + G 76 -2.8 -4.98616 | overlap 2374092 TTCCATGCCCTGGTA TGATAAGG TCAC CCCTATCG TTTTTGATCTTTTGA Dole_1963 2373963 - 2374814 + | NAD-dependent epimerase/dehydratase Dole_1964 2374804 - 2375862 + | methyltransferase type 11 Dole_1965 2375910 - 2376692 + | cephalosporin hydroxylase Dole_1966 2376697 - 2378220 + | polysaccharide biosynthesis protein Dole_1967 2378263 - 2379165 + | glycosyl transferase family protein TERM 3697 2379505 - 2379491 - g 73 -2.8 -4.82901 | overlap 2379494 2379496 CTTCTGGTAGAAAAA GGATAC CGG GTATGC GGCACATCCCGAGAT Dole_1968 2379419 - 2380372 + | NAD-dependent epimerase/dehydratase Dole_1969 2381549 - 2380431 - | glycosyl transferase group 1 Dole_1970 2382574 - 2381597 - | glycosyl transferase family protein TERM 3698 2381665 - 2381638 - G 71 -7.7 -4.07618 | CCTTTAAGAATGAAA GCGTCTGAATG GAGTTT CTTCCAGACGC CCAGCCTATTCCGCG TERM 3699 2382117 - 2382086 - G 75 -9.5 -3.79419 | gap 2, opp_overlap 2382085 2382111, overlap 2382084 2382106 GCGGCGCACAAAACA GCCGCCG--CCGCTT AAAA AAGCGGTTCGGCAGC GTTCCGTCTTCACTT Dole_1971 2383632 - 2382589 - | glycosyl transferase family protein TERM 3700 2382639 - 2382651 + g 85 -3.3 -5.37593 | opp_overlap 2382630 AATTGAGGCCGTACA GCCAG TTT CTGCC TTTTTTGCTTTCACC TERM 3701 2382725 - 2382713 - G 76 -4.7 -4.74103 | TCGCGAATGCAAAAA CCGCC CTT GGCCG CGTTGATGATCAGCT TERM 3702 2383522 - 2383510 - G 76 -3.3 -4.95618 | overlap 2383512 2383513 AAGAGCAAAAAGAAA CAGGC CGG ACCCG GCAAACAGGAAAAAA TERM 3703 2383842 - 2383831 - R 71 -7.2 -4.07568 | TCGGCCGGGGTAAAA CGCC TGAC GGCG TCACTACGAACAGGG TERM 3704 2383959 - 2383996 + r 87 -10.7 -4.18494 | ACGAACAGATGCTCA GCTTAACCCGAATATTT CATG AAATATCCGGGTTCGGC TTTTAAATCAACATC Dole_1972 2385489 - 2384026 - | hypothetical protein TERM 3705 2384360 - 2384349 - G 76 -3 -4.87273 | opp_overlap 2384353 AAGAGTCCAGAAAAA TACT TCCC AGTA CGGGATATCTTGGCG Dole_1973 2387526 - 2385796 - | AMP-dependent synthetase and ligase TERM 3706 2386336 - 2386359 + g 73 -11.7 -3.05384 | overlap 2386323 GGCCGGCAGTTCCCA GCCGCTGTC GTCCAG GACGGCGGC TTCGATGCCGGGCAG TERM 3707 2387209 - 2387191 - G 77 -2.3 -5.0538 | gap 1, overlap 2387194 GGCCATGGCAAAAAA GAACGCCC GGCA GGGCGG-C AGAAAAATCATCAGG TERM 3708 2387207 - 2387194 - G 87 -9.5 -4.63089 | overlap 2387191 CATGGCAAAAAAGAA CGCCC GGCA GGGCG GCAGAAAAATCATCA TERM 3709 2387232 - 2387245 + g 70 -3.7 -4.56597 | opp_overlap 2387221 2387243 TCATCAGGCAGTCGC CGGCC TCAA GACCG TTTTTGACAAAAAAA TERM 3710 2387277 - 2387261 - G 100 -11.5 -5.60993 | overlap 2387243 2387262 TTTTTGACAAAAAAA CCGGCCC ACC GGGCCGA GATGTCGCGCATCTG TERM 3711 2387276 - 2387262 - G 91 -12.8 -3.95873 | overlap 2387243 2387261 TTTTGACAAAAAAAC CGGCCC ACC GGGCCG AGATGTCGCGCATCT TERM 3712 2387340 - 2387373 + g 93 -13.7 -3.93583 | opp_overlap 2387337 2387335 2387334 2387332, overlap 2387341 TGTGAAATATCATGG CCGGCTGTCCGGCCG TGTC CGGCCGGGCGGCCCA TTTATCGATGGATTG TERM 3713 2387341 - 2387372 + g 88 -17.2 -2.95668 | opp_overlap 2387337 2387335 2387334 2387332, overlap 2387340 GTGAAATATCATGGC CGGCTGTCCGGCCG TGTC CGGCCGGGCGGCCC ATTTATCGATGGATT Dole_1974 2388560 - 2387523 - | histone deacetylase superfamily protein TERM 3714 2388230 - 2388216 - G 100 -8.5 -4.88736 | CACCAGGGAGAAAAA GGCGC GGCAG GCGCC GGACAAAAGAAGGTC TERM 3715 2388302 - 2388331 + g 70 -4.9 -4.46212 | overlap 2388305 2388318 GGTAGGAGTGGCCGC TGACCGGCGTGTC CGGC GCCATGCTGGTGA TTTTGTGCTCAGCGG Dole_1975 2390684 - 2388720 - | acetate--CoA ligase TERM 3716 2390615 - 2390631 + g 87 -4.3 -5.42862 | overlap 2390616 GCTGATACGCCTCCA TGCCCTT GAT ATGGGCG TTTTTTTGAAACTCT TERM 3717 2390721 - 2390739 + r 82 -12.4 -3.22924 | overlap 2390719 2390736 ATCACGTTGGGCCGG GCCGGCAT CCG GTGCCGGC TGTTCGTCGTTTAAA Dole_1976 2392604 - 2390703 - | acetyl-CoA hydrolase/transferase TERM 3718 2390969 - 2390959 - G 72 -4.6 -4.65895 | CGGCTCACCGAAAAA GCCA CTT CGGC CATGTTGCCGGGGGA TERM 3719 2391356 - 2391332 - G 79 -7 -4.57073 | opp_overlap 2391345 GAGCCTGTTCAAAAA GCGCTTCCCG GAAGT CGGGATGGGC CAGGGAGATCATGGC TERM 3720 2391881 - 2391894 + g 84 -2.3 -5.40072 | opp_overlap 2391873, overlap 2391873 2391882 TGACAAACTGGGTAT GGACC CCCA GGTCG TTTTTTTCGGACAGG TERM 3721 2392535 - 2392561 + g 100 -9.4 -5.40474 | GGCGACCGGACTTGA GAACCGACAGGG CCT CTTTGGCGGTTC TTTTTTTCCGGACAT TERM 3722 2392938 - 2392922 - g 78 -4.3 -5.00616 | opp_overlap 2392922 TTTCTGGCCAAAAAA CTGGAGC CGT ACACCAG TGAATTTACGGTTCT TERM 3723 2393416 - 2393396 - g 72 -4.8 -4.56597 | gap 1, opp_overlap 2393400 2393413 CTGGCGGCTGAAAAA GCAG-TCAT AGAG ATGATCTGC TGGGAGTCGGCCGTG TERM 3724 2393494 - 2393468 - g 84 -2.2 -5.38054 | overlap 2393491 CGGCAGAAAGAAAAA GAGATCAAGCAG CCG CTGATGAACCTC CTGATGGAGGGGTCC TERM 3725 2393588 - 2393549 - g 100 -9.8 -4.88217 | gap 1, overlap 2393551 ACGAAAAAAGCAAAA CCGGCGGCCC-CCAGACCG CCC CGGCCGGCCAGGCCCCCGG AACCGGCAAAAAAGA TERM 3726 2393617 - 2393606 - g 81 -3.6 -5.04249 | overlap 2393608 CCGGCAAAAAAGAAA GACG ACCC CGCC AAAGACAGCGACGAC Dole_1977 2392862 - 2393659 + | response regulator receiver protein Dole_1978 2394740 - 2393733 - | hypothetical protein TERM 3727 2393893 - 2393880 - G 76 -4.5 -4.72986 | gap 1, opp_overlap 2393880 GACCTCCATGAAAAA GCCTGG TGC CC-GGC GTTCTTCCCCTGTGT Dole_1979 2395800 - 2394859 - | 2-dehydropantoate 2-reductase Dole_1980 2396742 - 2395843 - | signal peptide peptidase SppA, 36K type TERM 3728 2396056 - 2396070 + g 74 -7 -4.39426 | opp_overlap 2396056 CAGTTCATCCACCAA GCCCAG CTC CAGGGC TTTTCTGCCGGTGTA TERM 3729 2396817 - 2396791 - R 100 -13.6 -5.29846 | opp_overlap 2396791, overlap 2396778 AACCCCAAATAAAAA CCGGGGGCGTGA CCA TCCGGCCCCCGG TTTATGATTATCCTA TERM 3730 2396791 - 2396817 + r 100 -13.6 -4.11281 | opp_overlap 2396778 2396791 AACCCCAAATAAAAA CCGGGGGCGTGA CCA TCCGGCCCCCGG TTTATGATTATCCTA TERM 3731 2396872 - 2396836 - R 73 -9.5 -3.34222 | opp_overlap 2396869 2396870, overlap 2396837 ATGATTATCCTACAA CCGCGTGAAAAAAAGCA AGC CGCCTTTTTTTACGCGT CGGTGTCCGACGGTT TERM 3732 2396871 - 2396837 - R 81 -13 -2.60212 | opp_overlap 2396869 2396870, overlap 2396836 TGATTATCCTACAAC CGCGTGAAAAAAAGCA AGC CGCCTTTTTTTACGCG TCGGTGTCCGACGGT TERM 3733 2396870 - 2396884 + r 75 -11.4 -2.53894 | opp_overlap 2396837 2396836, overlap 2396869 2396880 CCGCCTTTTTTTACG CGTCGG TGT CCGACG GTTCGTCCTCGTCGT Dole_1981 2398679 - 2396865 - | ribosomal protein S1 TERM 3734 2398005 - 2398023 + g 75 -5.3 -4.60041 | gap 1, opp_overlap 2398005 2398007, overlap 2398007 GCCCAGGTCCACGAA CA-CACCG TACT CGGTGATG TTTTTCACAATGCCT TERM 3735 2398710 - 2398723 + r 85 -9.5 -4.4078 | opp_overlap 2398709 2398710 TACCGGAATTTAAAC GGCCC CGCA GGGCC TTTTGATTCGGGAAA Dole_1982 2399453 - 2398785 - | cytidylate kinase TERM 3736 2399300 - 2399310 + g 87 -8.2 -4.86731 | overlap 2399286 CGTCGTCGTCCTCAG GGGC CAC GCCC TTTTCTTTGGCGGCC Dole_1983 2400538 - 2399450 - | histidinol-phosphate aminotransferase TERM 3737 2400056 - 2400074 + g 80 -4.5 -4.87389 | overlap 2400058 GGTCGGGTTGTTGGG GTTGGTG AGAAA CACCATC TTTGTTTTTGACGTA TERM 3738 2400289 - 2400304 + g 78 -6 -4.58685 | overlap 2400291 CCAGGACAATGGACT CCGGGG CCAC CCCCAG TTTTTGCGCAAGTTT TERM 3739 2401404 - 2401425 + G 72 -8.6 -3.81137 | opp_overlap 2401398 2401395 2401397 2401391, overlap 2401405 CACCAACATCTCCGA AGGCCGGG GCACCA CCCGGCCC TTTGAATATTTCGGC TERM 3740 2401405 - 2401424 + G 71 -12.1 -2.882 | opp_overlap 2401398 2401395 2401397 2401391, overlap 2401404 ACCAACATCTCCGAA GGCCGGG GCACCA CCCGGCC CTTTGAATATTTCGG Dole_1984 2400673 - 2401845 + | hypothetical protein TERM 3741 2401950 - 2401938 - g 71 -10.5 -3.53091 | AGGTGTGGGTTGAAA CCGGC CCG GCCGG TGACCTGCTGGTCCA TERM 3742 2402373 - 2402348 - g 95 -2.5 -5.95286 | opp_overlap 2402350 ATCAAAAACAAAAAA CTGCCGGTG CGCCTTTT CACGGACAG CGCTTATTCCCTGGG Dole_1985 2401874 - 2402566 + | ribonuclease H TERM 3743 2402591 - 2402572 - T 100 -15 -5.7946 | opp_overlap 2402572 TGCGGAATAAAAAAA GCCCGTGC ATGG GCACGGGC TTTTCAATAAACAGA TERM 3744 2402572 - 2402591 + T 100 -15 -4.18018 | opp_overlap 2402572 TGCGGAATAAAAAAA GCCCGTGC ATGG GCACGGGC TTTTCAATAAACAGA Dole_1986 2402896 - 2402627 - | hypothetical protein TERM 3745 2403127 - 2403117 - H 73 -8.2 -3.81447 | opp_overlap 2403120, overlap 2403118 TATAGTGCACAACAA CCGG CGG CCGG ATCGTCGCGGGCGAC TERM 3746 2403377 - 2403358 - g 76 -2.8 -5.00616 | gap 1, opp_overlap 2403339, overlap 2403360 CCGTGCTTCAAAAAA TAGAG-GCC GGA GGCTCTCTC AAACTGCTGGGCACC Dole_1987 2403171 - 2404019 + | hypothetical protein Dole_1988 2405449 - 2404484 - | low molecular weight phosphotyrosine protein phosphatase TERM 3747 2405100 - 2405078 - G 89 -16.2 -3.25223 | CAGGGAGAGCATGAA CCCGGCCCGG CTC CCGGCCCGGG GATCGCGCAGGTTCA TERM 3748 2405295 - 2405323 + g 75 -5.9 -4.56597 | overlap 2405297 CCGTGCTTTTCGCAG TAGGTGCAGCC GATGCAG GGCAGCACCTC TTTTTCCGCCACCAC TERM 3749 2405297 - 2405321 + g 72 -8.5 -3.90048 | overlap 2405295 GTGCTTTTCGCAGTA GGTGCAGCC GATGCAG GGCAGCACC TCTTTTTCCGCCACC TERM 3750 2405399 - 2405410 + g 87 -3.6 -5.40474 | GGCGGAAAGCAGGTA GGCG GAGT TGCC TTTTTTTCGCGGACT Dole_1989 2406226 - 2405570 - | methyltransferase type 11 Dole_1990 2406848 - 2406213 - | hypothetical protein TERM 3751 2406664 - 2406651 - G 72 -9.5 -3.64103 | opp_overlap 2406661, overlap 2406652 CACGCACAGGTCAAA GCCGG GCCG CCGGC CACCGGCATCCTGGA TERM 3752 2407028 - 2407016 - g 72 -6.2 -4.26903 | opp_overlap 2407026 TTGATTCCATCAAAA GCGC GGTCA GCGC CATGGGTCGTTTTTT TERM 3753 2407026 - 2407037 + G 77 -2.2 -5.03145 | gap 1, opp_overlap 2407016 CAAAAGCGCGGTCAG CG-CC ATG GGTCG TTTTTTCGCCGGTTA TERM 3754 2407355 - 2407376 + G 89 -6.5 -5.03747 | overlap 2407348 2407357 GCCGTATTTTCAGGG TGGTCCTGG CCAA CCTGGACTA TTTTTTCCGGCATTT TERM 3755 2407357 - 2407374 + G 71 -6.9 -4.13963 | overlap 2407348 2407355 CGTATTTTCAGGGTG GTCCTGG CCAA CCTGGAC TATTTTTTCCGGCAT TERM 3756 2408269 - 2408280 + G 75 -3.6 -4.72272 | GGACCCATCTTCCGG GGTG GCGG CGCC TTTTTCATGCGGCGC TERM 3757 2408582 - 2408568 - g 85 -3.5 -5.40072 | gap 1, overlap 2408570 GGGCGGTGAAAAAAA GGC-GG AAAA CCTGCC GGAACTGATCAAGGC TERM 3758 2409490 - 2409479 - g 85 -3 -5.44119 | CTCACGGTAAAAAAA TGTT TAAA AACA ATGAAATAGAGCGCC Dole_1991 2406997 - 2409642 + | glycerol-3-phosphate O-acyltransferase Dole_1992 2409639 - 2411384 + | aminoglycoside phosphotransferase Dole_1993 2411498 - 2411905 + | TM2 domain-containing protein TERM 3759 2411939 - 2411965 + T 100 -20.2 -4.1899 | opp_overlap 2411939 TATGACATAAAAAAA CCGCCGGGCTCA TTA TGAGTCCGGCGG TTTTGACTGCCCTCA TERM 3760 2411965 - 2411939 - T 100 -18 -5.74122 | opp_overlap 2411939 TATGACATAAAAAAA CCGCCGGGCTCA TTA TGAGTCCGGCGG TTTTGACTGCCCTCA Dole_1994 2415943 - 2411978 - | hypothetical protein TERM 3761 2412060 - 2412033 - G 72 -4.7 -4.63486 | overlap 2412035 2412036 ATCGTTTCAATAAAA CATCCGCCACC CCCGCC GGCGGCAGCCG GGGCTGAAGGCGCTG TERM 3762 2412751 - 2412739 - G 72 -6.3 -4.40561 | overlap 2412750 CGGCGTCAAAAACAA GGTTT GAA AAACC GGCATCCAGGGCCAC TERM 3763 2412760 - 2412750 - G 72 -4.6 -4.60255 | overlap 2412739 2412751 ACAAGGTTTGAAAAA CCGG CAT CCAG GGCCACCTGCCATAC TERM 3764 2413860 - 2413875 + g 80 -10.4 -4.07568 | GCACTCTCGGTCAGG TCGCCG GAAG CGGCGA TTTTGAAAAAGACCA TERM 3765 2413900 - 2413923 + g 83 -8.2 -4.66537 | AGACCATGGTGCCGT CCATCTCC CAGGTGCC GGAGATGG TTTTGTCTTCAGCGG TERM 3766 2414017 - 2414003 - G 81 -12.8 -3.53012 | opp_overlap 2414001 2414000 2414008, overlap 2413985 2413979 GCCGGCCCCGTCAAA CCGGGC CGT GCCCGG GAATTCTCCCAGCAC TERM 3767 2414984 - 2415002 + g 74 -8.1 -4.24326 | overlap 2414999 CGTGTCGGAGCCGAA CCGGACC TCAAT GGTCTGG TTTTCAGTGATATTT TERM 3768 2415344 - 2415330 - G 78 -6.4 -4.67038 | GTGGGAAAATCAAAA TTCCAG GTG CCGGAA GCAACACCGCTGTCA TERM 3769 2416169 - 2416158 - H 91 -3.6 -5.71712 | CGTTATACAAAAAAA CGGC ACTT GCCA TCCTGCTCTTTTATG TERM 3770 2416414 - 2416393 - g 78 -8.7 -4.13945 | ATGCGGACCGCAAAA GGGGGATAT CTTC ATCTCCCCC ATGGTGGGCGGCCAC TERM 3771 2416928 - 2416913 - g 72 -4.6 -4.56597 | opp_overlap 2416927 GCGGTCGTGGAAAAA CCAAGG CCCG CCCCGG CTCCTCAGCCTGTCG TERM 3772 2417188 - 2417202 + G 71 -7 -4.10007 | opp_overlap 2417197, overlap 2417198 GGGCCATACCGACAG CCGAGG CAA CCCCGG TTTTAACCAGGTTCT Dole_1995 2416217 - 2417383 + | OmpA/MotB domain-containing protein TERM 3773 2417394 - 2417451 + F 100 -22.3 -2.99311 | opp_overlap 2417398 2417403 2417408, overlap 2417395 2417408 ACTGATTCACTTCAT AGCACCATAGAAAACGGCATCTTTCGT TTTG GCGAAAGATGCCGTTTTCTATGCCGCA AATTTTTTTCTCCTT TERM 3774 2417395 - 2417453 + F 100 -7.8 -5.73339 | gap 3, opp_overlap 2417398 2417403 2417408, overlap 2417394 2417408 CTGATTCACTTCATA ---GCACCATAGAAAACGGCATCTTTCGT TTTG GCGAAAGATGCCGTTTTCTATGCCGCAAA TTTTTTTCTCCTTCT TERM 3775 2417447 - 2417398 - f 100 -24 -2.63715 | opp_overlap 2417394 2417395 2417408, overlap 2417403 2417408 ATTCACTTCATAGCA CCATAGAAAACGGCATCTTTCG TTTTGG CGAAAGATGCCGTTTTCTATGC CGCAAATTTTTTTCT TERM 3776 2417442 - 2417403 - f 100 -22.5 -2.84634 | opp_overlap 2417394 2417395 2417408, overlap 2417398 2417408 CTTCATAGCACCATA GAAAACGGCATCTTTCG TTTTGG CGAAAGATGCCGTTTTC TATGCCGCAAATTTT TERM 3777 2417408 - 2417437 + F 100 -17.3 -4.52589 | opp_overlap 2417403 2417398 2417408, overlap 2417394 2417395 TAGCACCATAGAAAA CGGCATCTTTCGT TTTG GCGAAAGATGCCG TTTTCTATGCCGCAA TERM 3778 2417437 - 2417408 - f 100 -16.6 -4.58424 | opp_overlap 2417408 2417394 2417395, overlap 2417403 2417398 TAGCACCATAGAAAA CGGCATCTTTCG TTTTGG CGAAAGATGCCG TTTTCTATGCCGCAA Dole_1996 2417784 - 2418224 + | hypothetical protein Dole_1997 2418287 - 2419567 + | hypothetical protein Dole_1998 2419640 - 2420080 + | hypothetical protein TERM 3779 2420188 - 2420198 + G 80 -2.4 -5.22006 | AACCCTTTTGATTTC CGCC ATG GCCG TTTTTCTTCTGCTGC Dole_1999 2420156 - 2421421 + | hypothetical protein TERM 3780 2421487 - 2421438 - f 100 -28.1 -3.57039 | gap 1, overlap 2421441 2421481 2421483 2421485 2421486 CACGCATAATCATAA CCATCTGTTTTCCCCGGCGCC-GG CAC CCAGGCGCCGGGGAAAACAGACCG TCTCCGGACGCACCG TERM 3781 2421484 - 2421441 - f 100 -30.6 -2.90904 | gap 1, overlap 2421438 2421481 2421483 GCATAATCATAACCA TCTGTTTTCCCCGGCGCC-GG CAC CCAGGCGCCGGGGAAAACAGA CCGTCTCCGGACGCA TERM 3782 2422263 - 2422237 - g 87 -16.6 -2.78816 | CCATGGTCCAGGATA TCGCCACCGGCA ACC TGTCGGTGGCGA TTGACGTGCGGCGGG Dole_2000 2421552 - 2423231 + | methyl-accepting chemotaxis sensory transducer TERM 3783 2423241 - 2423262 + T 78 -5.8 -4.83169 | overlap 2423237 TTCTGAAGTTTCATG CCCCGG GCCTGTTTTG CCGGGG TTTTTATAAAGGGGT TERM 3784 2423298 - 2423323 + T 100 -19.7 -5.60993 | ACGGCACTCCACTGG CCGGGGTGCGG CATG CCGCGCCCCGG TTTTTTTGTGGCAGG Dole_2001 2424683 - 2423382 - | TRAP dicarboxylate transporter, DctM subunit TERM 3785 2424140 - 2424114 - G 78 -9.2 -3.96624 | overlap 2424116 2424129 2424131 GATGGTGACCACAAA CAGCCCGGTCAG CAA CAGGCCGGGCAG AATGCCGGCCAGGAA TERM 3786 2424138 - 2424116 - G 71 -10.4 -3.57406 | overlap 2424114 2424129 2424131 TGGTGACCACAAACA GCCCGGTCAG CAA CAGGCCGGGC AGAATGCCGGCCAGG Dole_2002 2425168 - 2424680 - | tripartite ATP-independent periplasmic transporter DctQ TERM 3787 2424884 - 2424871 - G 90 -3.1 -5.75342 | gap 1, opp_overlap 2424872, overlap 2424872 CGGCGGCAAAAAAAA CCGTGG CCA CCA-GG TTGTTGAACAGGTGA TERM 3788 2425110 - 2425055 - G 72 -4.6 -4.62069 | gap 1, opp_overlap 2425104, overlap 2425099 2425103 GGGGCACCGGAAAAA CCGGAGCA-CCACGTCGATCACGGTGA CCA TCATCATGGCCACAATGGATGCCCCGG CCAGCCAGTTGGCCT TERM 3789 2425155 - 2425099 - G 82 -13.6 -3.31792 | opp_overlap 2425104, overlap 2425055 2425103 TCATCATGGCCACAA TGGATGCCCCGGCCAGCCAGTTGGCC TTGTC GGCCAGCTGGCTGATCAGGGCTTTGA CAAAATGTCCCATCG TERM 3790 2425151 - 2425103 - G 95 -18.8 -2.59748 | opp_overlap 2425104, overlap 2425055 2425099 CATGGCCACAATGGA TGCCCCGGCCAGCCAGTTGGCC TTGTC GGCCAGCTGGCTGATCAGGGCT TTGACAAAATGTCCC TERM 3791 2425104 - 2425150 + g 100 -22.3 -3.55071 | opp_overlap 2425055 2425103 2425099 ATGGCCACAATGGAT GCCCCGGCCAGCCAGTTGGCC TTGTC GGCCAGCTGGCTGATCAGGGC TTTGACAAAATGTCC Dole_2003 2426280 - 2425210 - | TRAP dicarboxylate transporter- DctP subunit TERM 3792 2426873 - 2426887 + G 74 -7 -4.36914 | opp_overlap 2426872 ATCATTGGAACCGAC GGCCAG TGG CGGGCC TTTTATGCGGAAAAG TERM 3793 2427005 - 2427027 + G 90 -7.6 -5.00884 | overlap 2426983 2427003 2426986 GCCTCGTCGGTCAGG TCCGGGGCCT TTG AGGCCAGGGA TTTTTTCCCGGCCCT TERM 3794 2427654 - 2427664 + G 70 -4.6 -4.46926 | CCCGGCATCAAGAGG GGCT CCG GGCC TTTTATCGTGAGGTG TERM 3795 2428058 - 2428038 - g 80 -9.7 -4.18018 | opp_overlap 2428041, overlap 2428041 TGTTTTCACCGAAAA CCATGGTGG CCG CCACCATTG ATCCCGGAACGTTTA TERM 3796 2428366 - 2428386 + G 72 -5.3 -4.54727 | TACCCAGGACATTCT GGCTTACAG CAC CCGGAAGCC TTTTGATTTCAACGC Dole_2004 2426708 - 2428612 + | multi-sensor signal transduction histidine kinase TERM 3797 2428852 - 2428819 - T 87 -11 -3.9941 | gap 1, opp_overlap 2428824, overlap 2428821 2428824 CCGCCGAGAATGAAA CACC-ACCCCGGCCC ATAAA GAGCCGGGGTTGGTC TCTACTCATGAGGCA TERM 3798 2428849 - 2428821 - T 91 -13.8 -3.5891 | opp_overlap 2428824, overlap 2428819 2428824 GCCGAGAATGAAACA CCACCCCGGCCC ATAAA GAGCCGGGGTTG GTCTCTACTCATGAG TERM 3799 2428846 - 2428824 - T 88 -14.1 -2.9127 | opp_overlap 2428824, overlap 2428821 2428819 GAGAATGAAACACCA CCCCGGCCC ATAAA GAGCCGGGG TTGGTCTCTACTCAT TERM 3800 2428824 - 2428846 + T 82 -11.9 -3.34088 | opp_overlap 2428821 2428819 2428824 GAGAATGAAACACCA CCCCGGCCC ATAAA GAGCCGGGG TTGGTCTCTACTCAT Dole_2005 2430287 - 2428854 - | peptidase C14 caspase catalytic subunit p20 TERM 3801 2431188 - 2431200 + G 81 -3.3 -5.252 | TCTGGCCGGCATGGT GGCGG TGA TCGTC TTTTTTCTGCCCCTG TERM 3802 2431495 - 2431484 - g 74 -2.2 -4.89567 | TTTTAAAAGATAAAA CCAA AATC CTGG GCTGGCTCAAGCTGT TERM 3803 2431734 - 2431746 + G 78 -6.2 -4.62069 | GATGTTCTTTCCCGT GGCC CTGGT GGCC TTTTTCCAGTGGGGG Dole_2006 2430943 - 2432034 + | hypothetical protein TERM 3804 2432588 - 2432607 + G 78 -3.5 -5.12987 | GCCTGGTGCCGGTCT CCACACC CGAGGC GTTGTGG TTTATTTTTCTTTCC TERM 3805 2432738 - 2432724 - g 72 -4.9 -4.56597 | overlap 2432725 CGGGGCCCTCAAAAA CCCGG TGCTG CCGGA AAACATGCTGATCAT TERM 3806 2432855 - 2432870 + G 73 -11.8 -3.05463 | CCATGGCCTTTCTCA CCGGCC TGAT GGCCGG TTCCATGAAAAAAAT Dole_2007 2432089 - 2433102 + | hypothetical protein TERM 3807 2433115 - 2433151 + F 77 -6.6 -4.56597 | gap 2, overlap 2433117 2433118 2433118 TAAATTATAGGTTTT CCAG-AC-GGCCGCCTTT CGT AAAGGCGGCCTGCGCTTG TTTTTACCCGGAACC TERM 3808 2433117 - 2433147 + F 70 -9.6 -3.23855 | overlap 2433115 2433118 2433118 AATTATAGGTTTTCC AGACGGCCGCCTTT CGT AAAGGCGGCCTGCG CTTGTTTTTACCCGG TERM 3809 2433118 - 2433146 + F 81 -13.1 -2.53831 | overlap 2433117 2433118 2433115 ATTATAGGTTTTCCA GACGGCCGCCTTT CGT AAAGGCGGCCTGC GCTTGTTTTTACCCG TERM 3810 2433118 - 2433148 + F 74 -6.9 -4.40561 | gap 2, overlap 2433117 2433115 2433118 ATTATAGGTTTTCCA G-AC-GGCCGCCTTT CGT AAAGGCGGCCTGCGC TTGTTTTTACCCGGA Dole_2008 2433196 - 2434242 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3811 2434682 - 2434672 - g 70 -4 -4.56597 | CGGCGTTTTTAAAAA TTTC GGG GAAA CCCATTCCGGCCCGG Dole_2009 2434242 - 2435141 + | alpha/beta hydrolase fold TERM 3812 2435403 - 2435415 + G 85 -3.3 -5.48825 | CATTCTCATGGTACG GCCCA GCC TGGAC TTTTTTTCCCTGGTC TERM 3813 2436858 - 2436835 - g 87 -3.8 -5.40873 | AAGATAAAAACAAAA CCGCGTCCTT CTCC AAAAAAGCGG GGATGAAAATGGCAA Dole_2010 2435170 - 2436864 + | peptide synthase TERM 3814 2437184 - 2437170 - g 90 -7.8 -5.00616 | overlap 2437175 GCGGCCTGCAAAAAA CACCAG GTG CCGGTG CTGGTGCACACCAGC TERM 3815 2437374 - 2437393 + G 72 -9.2 -3.72695 | CGGCCCCACCTGATC TGGGGGCC GGGT GACCCCCA TTTGGTACCCCGGGT TERM 3816 2437653 - 2437636 - g 70 -2.5 -4.82901 | opp_overlap 2437636 CGCCGGTGACAAAAA CCCTGCC GGCT GGCGTGG TATGGTGCGTAGGCG Dole_2011 2436867 - 2437859 + | 3-beta hydroxysteroid dehydrogenase/isomerase TERM 3817 2437898 - 2437935 + T 73 -5.6 -4.56978 | gap 2, opp_overlap 2437910 CCCCAGAAATAGGTA GGGCACAAAGAACGGCTC CCAA GA-CCGG-CTTCGTGCCC TTTGTTGTTTCAGGA Dole_2012 2438572 - 2437967 - | peptidoglycan-binding LysM TERM 3818 2438526 - 2438512 - G 100 -8.5 -5.34365 | CGACAATAATAAAAA CCGCG CATGC CGCGG TCACAAAAAGAATGG TERM 3819 2438704 - 2438686 - H 72 -10.2 -3.00946 | opp_overlap 2438685 2438687, overlap 2438684 2438683 TTCTGGTATAAAGCA GCAGCCGC CCG GCGGCTGT ATTGATCGGACTATA TERM 3820 2438687 - 2438703 + H 88 -13.7 -3.14229 | opp_overlap 2438684 2438683 2438686, overlap 2438685 TCTGGTATAAAGCAG CAGCCGC CCG GCGGCTG TATTGATCGGACTAT TERM 3821 2438949 - 2438929 - g 87 -8.2 -4.72272 | opp_overlap 2438928 GTCCTCTATGAAAAA CTGCTGGC AGCGG GCCGGCAG GTGGTATTGCGGGCC TERM 3822 2439321 - 2439310 - g 84 -3.6 -5.24129 | overlap 2439272 2439312 TTTCTGGACAAAAAA GACC CCAC GGCC CACTGGGAGACGATC Dole_2013 2438746 - 2439978 + | peptidase M29 aminopeptidase II Dole_2014 2443143 - 2440159 - | peptidase C25 gingipain TERM 3823 2441687 - 2441669 - G 70 -4.5 -4.46926 | gap 1, opp_overlap 2441669 TAGGTTACCAGAAAA CGGCCCGC GTTT ACGG-CCG TTGATATGTCAACGG TERM 3824 2441907 - 2441893 - G 86 -2.8 -5.60993 | CGGGTCAGAAAAAAA GAGG GCCATAT CCTC GGCGGACTGGAGAAA TERM 3825 2442912 - 2442872 - G 85 -10.4 -4.3739 | gap 1, overlap 2442902 TACCGGCTGACAAAA GGCAGGGACGGT-TTGCCG ATAC CGGAAAGACGGCCCCCGCC CGGCACTGATATGCC TERM 3826 2443027 - 2443042 + g 76 -11.8 -3.35679 | opp_overlap 2443008 CCGGACAGTTTCAAG GGCCGG TGGC CCGGCC TTGTGGCTGCCCGCG Dole_2015 2444493 - 2443288 - | mannose-6-phosphate isomerase, class I TERM 3827 2444057 - 2444045 - G 78 -9.1 -4.15543 | overlap 2444036 GAAACAGGTCGAAAA CCGCA CAA TGCGG TAAAAGGGGCAAGCG TERM 3828 2444638 - 2444602 - R 100 -15.7 -3.56594 | overlap 2444592 2444604 TGAAAGCTGGTGAAA GACGGCGCCCGGCCGAT GGT ACGGGCCGGGCGCCGAT GCCTGTGAAGCAGGA TERM 3829 2444636 - 2444604 - R 100 -22.7 -3.3579 | overlap 2444602 2444592 AAAGCTGGTGAAAGA CGGCGCCCGGCCGAT GGT ACGGGCCGGGCGCCG ATGCCTGTGAAGCAG Dole_2016 2446975 - 2444654 - | SH3 type 3 domain-containing protein TERM 3830 2445463 - 2445480 + g 76 -12.7 -3.17051 | overlap 2445462 TCACAGCGGCACCAG CCGCAGC CGCG GCTGCGG TCTTCATAGTGCCGG TERM 3831 2446438 - 2446456 + g 73 -11.6 -3.44146 | TTTCGCCAAGGGCAT GGGCGGCG GCC CGCCGCAC TTCATTGTAACGGGA Dole_2017 2447894 - 2447031 - | hypothetical protein TERM 3832 2448054 - 2448013 - R 73 -9.6 -3.34398 | opp_overlap 2448017, overlap 2448018 2448040 CTTTTGCCTGAAACA GAAAAGGGCATCCCATTT ACTGAA AAATGAAACGCCCTTTAC CCGTTTCAGTGAATA TERM 3833 2448049 - 2448018 - R 85 -8.1 -4.78848 | opp_overlap 2448017, overlap 2448013 2448040 GCCTGAAACAGAAAA GGGCATCCCATTT ACTGAA AAATGAAACGCCC TTTACCCGTTTCAGT Dole_2018 2448281 - 2448081 - | cold-shock DNA-binding domain-containing protein Dole_2019 2449198 - 2448470 - | ABC transporter-related protein TERM 3834 2448977 - 2448937 - G 73 -11.1 -3.38314 | opp_overlap 2448937 2448940, overlap 2448935 2448940 2448970 2448971 CCGAATCCTGAAACA GCAGCCCGATTCTGCGGCG GAC CGCCACAAAATCCCGCTCC TTTTGAACCGGTTTG Dole_2020 2449949 - 2449191 - | cobalt ABC transporter, inner membrane subunit CbiQ TERM 3835 2449598 - 2449569 - G 77 -10.1 -3.87815 | gap 1, opp_overlap 2449582 2449583 2449595, overlap 2449570 2449572 GCCCATGGTGACAAA GGACATGGTGGC AACCAGG GCCACCATG-CC AAGAATGATGGCATT TERM 3836 2449598 - 2449570 - G 74 -12.5 -2.92475 | opp_overlap 2449582 2449583 2449595, overlap 2449569 2449572 CCCATGGTGACAAAG GACATGGTGGC AACCAGG GCCACCATGCC AAGAATGATGGCATT Dole_2021 2450655 - 2449957 - | hypothetical protein TERM 3837 2450651 - 2450672 + g 75 -5.9 -4.63592 | AAACCGATCACGCTT TTCATAACG ACTC CGATATGAA TTGTTTTTATTCAAG Dole_2022 2451272 - 2450679 - | cobalamin (vitamin B12) biosynthesis CbiM protein Dole_2023 2452069 - 2451296 - | hypothetical protein TERM 3838 2452135 - 2452095 - R 100 -5.7 -5.79595 | gap 3, opp_overlap 2452097 2452104 2452128, overlap 2452074 2452097 2452104 TTTGAAAACAAAAAA GCCACGAA--C-CGTGTATC TTCA GATACACATGCCTTCGTGGC GAATGGTTAGAAAAT Dole_2024 2453580 - 2452252 - | phosphoglucosamine mutase TERM 3839 2452288 - 2452304 + g 81 -11.5 -3.92324 | TGCTTTGGCAATCTG CCCGGCG CAT TGCCGGG TTTCGTCTTCCGAAG Dole_2025 2454860 - 2453577 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 3840 2454041 - 2454025 - G 74 -10.9 -3.53091 | AGGGCCTCGGGGAAA TTCACCG GAT CGGTGAA CATGACCCGCACATA TERM 3841 2454848 - 2454861 + g 70 -2.3 -4.7373 | CCTTGATGGTCTGAT CCTGG AGGT CCATG TTTTTCCTCGCATGA TERM 3842 2455218 - 2455199 - g 70 -2.2 -4.82901 | gap 1 GTCCGGCCAGAAAAA TCTC-AACA CCC TGCTCGAGA TGATCGTGGACGAGG TERM 3843 2456143 - 2456119 - g 84 -2.7 -5.40072 | overlap 2456123 CGGCCCTTAAAAAAA TGGAGGCCATG GAC CGCGAACTCCA GGCCCGGAAAGCGGA Dole_2026 2455026 - 2456732 + | metal dependent phosphohydrolase Dole_2027 2457204 - 2456803 - | hypothetical protein TERM 3844 2456852 - 2456862 + g 70 -2.4 -4.74013 | TCCGGGTCCTCCATG GAGG CGG CCGC TTTTGTCTCTTTGGC TERM 3845 2457168 - 2457189 + g 73 -2.9 -4.84311 | opp_overlap 2457151 2457150 2457168 CCACTGCGATAACAG CGGCGCA AATTATCA TGCTCCG TTTTCTTATGTGCAA Dole_2028 2458274 - 2457501 - | hypothetical protein TERM 3846 2457925 - 2457890 - G 84 -3.8 -5.2166 | overlap 2457872 CAAGAAGGGAAAAAA GCCCTTCCTGCACGGA TGTC TCCTTGCTGCAGGAGC GTTCCGGGGTGTTAC TERM 3847 2458569 - 2458553 - R 85 -12.3 -3.35679 | opp_overlap 2458540 TTCCGTGAGCCACAA CGGCATG CGC CATGCCG GTCCGGCTCATCCGG Dole_2029 2459899 - 2458610 - | adenylosuccinate synthetase Dole_2030 2460368 - 2459928 - | CMP/dCMP deaminase zinc-binding TERM 3848 2459981 - 2459959 - G 100 -10.5 -5.40072 | opp_overlap 2459958 CTTTGCTCAAAAAAA GCCTGCAGG ATAGA CCGGCAGGC ATCTTCGCACACCCC Dole_2031 2461825 - 2460389 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 3849 2461253 - 2461273 + g 75 -5.4 -4.56597 | gap 2, opp_overlap 2461232, overlap 2461233 GGATCGAAGATAGGC CCGG--GCCG TTT CGGCATCCGG TTTTTCAACAAACGC TERM 3850 2461337 - 2461351 + g 88 -5.6 -5.21709 | ATGGTCTTGACCGGC GGAGAC CGG GTCGCC TTTTTTAATGTAGCC Dole_2032 2462673 - 2461822 - | 3'(2'),5'-bisphosphate nucleotidase TERM 3851 2462990 - 2462951 - R 100 -14.4 -5.15969 | opp_overlap 2462957 2462958, overlap 2462954 TGTCAACCGAAAAAA TAACCGGCGCAAAGGA TTTGCGGT TCCTTTGCGCCGGTCG GTGGATATTAGATCA TERM 3852 2462987 - 2462954 - R 100 -18.3 -4.67173 | opp_overlap 2462957 2462958, overlap 2462951 CAACCGAAAAAATAA CCGGCGCAAAGGA TTTGCGGT TCCTTTGCGCCGG TCGGTGGATATTAGA Dole_2033 2463909 - 2462998 - | methenyltetrahydrofolate cyclohydrolase TERM 3853 2463134 - 2463163 + g 70 -12.3 -2.72463 | gap 1 TCAAAATCCACATCC CCCGA-CAGAATGG CAA CCATTTTGTTCGGG TCCTTGGCGCTGGGT TERM 3854 2463806 - 2463822 + g 90 -7.9 -4.91873 | overlap 2463808 AGGATGGTCACCAGC CCCGGCA CCT TGCCGTG TTTTTCCTTGATCTC TERM 3855 2463808 - 2463820 + g 75 -9.1 -4.07008 | overlap 2463806 GATGGTCACCAGCCC CGGCA CCT TGCCG TGTTTTTCCTTGATC Dole_2034 2465051 - 2463999 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 3856 2464407 - 2464424 + g 87 -12.7 -3.89614 | CTCCATCTCCGGTGC GTGGCGG TGAG CCGCCAC TTTATAGGCCTTGAA TERM 3857 2464897 - 2464880 - G 71 -6.9 -4.11404 | overlap 2464860 2464876 CGCACACCAGAGAAA CGGCTGT TCCC ACCGCCG GATAGACCTGGTTAA TERM 3858 2465156 - 2465211 + H 83 -9.6 -4.30416 | overlap 2465198 GGCAACACTTTTTCA CCGGCCCTGTTTCCGGCCCGCGGT ATCGTTCG AGCGACGGCTGGAAAAAGCGCCGG TTTTCCGTTAATCCT Dole_2035 2465857 - 2467044 + | putative RNA methylase TERM 3859 2467317 - 2467294 - f 100 -14 -5.45726 | opp_overlap 2467294 TACACCTTAAAAAAA CCGTTATCAG CCCT CTGATAACGG TTTTTTTTTACCCGA TERM 3860 2467294 - 2467317 + F 100 -14 -6.06723 | opp_overlap 2467294 TACACCTTAAAAAAA CCGTTATCAG CCCT CTGATAACGG TTTTTTTTTACCCGA TERM 3861 2468091 - 2468079 - g 72 -4.7 -4.57569 | CGACCTTCTTAAAAA CGGCG TCA CCCCG GACAAAATCATGACG TERM 3862 2468469 - 2468485 + G 85 -11.5 -4.08692 | CCCCCACCATGCCCA GGGCGGC CTG GCCGTCC TTTTCGGCAACCTTG Dole_2036 2467348 - 2469021 + | dihydroxy-acid dehydratase TERM 3863 2469666 - 2469648 - g 72 -4.5 -4.66264 | opp_overlap 2469638 GAAAACCGCCAAAAA GCCGG TGATCTTTT CCGGC GGGGGCATCATCTTT TERM 3864 2469735 - 2469721 - g 84 -2.7 -5.40072 | CGGTTTGCAAAAAAA GCCCG CATTC CGGTC ACCTCGACGCTGATG TERM 3865 2470080 - 2470069 - g 77 -2.2 -5.11033 | gap 1, overlap 2470072 GACAAGGTCAAAAAA GAGCG GAC CGC-C TGGGCCAAACAGATT TERM 3866 2470123 - 2470112 - g 84 -2.2 -5.44119 | overlap 2470113 CGGACTGGAAAAAAA CCAA GCCC CTGG CCTACACCCAGACGG TERM 3867 2470640 - 2470620 - g 73 -3.1 -4.74801 | GAAGGTGATTAAAAA GGCCCTGGC AAC GCCCAAACC GGTGATCATGGACTT Dole_2037 2469037 - 2470731 + | acetolactate synthase, large subunit, biosynthetic type Dole_2038 2470747 - 2471247 + | acetolactate synthase, small subunit Dole_2039 2471286 - 2472344 + | ketol-acid reductoisomerase TERM 3868 2472451 - 2472396 - f 100 -15.5 -3.4745 | gap 1, opp_overlap 2472406 2472418 AAAAATGGACGATAA CGGGGACA-GACCCGCTAAAATCGGC TATTG GCCTCTTTTGGCGGGTGATGTCCCCG TGATCGACGCTGCGT TERM 3869 2472406 - 2472440 + F 75 -11.4 -2.63102 | opp_overlap 2472396, overlap 2472418 GATAACGGGGACAGA CCCGCTAAAATCGGCT ATT GGCCTCTTTTGGCGGG TGATGTCCCCGTGAT TERM 3870 2473461 - 2473418 - g 76 -12.7 -3.03771 | gap 3, opp_overlap 2473418 2473418 2473421, overlap 2473408 TGACACCGGTCAACA GCCGGCCCTTTGTGGGCAAAAG CGC CTTCT-CCCACA-AGGGC-GGC CTTCATGTCAGCGCC TERM 3871 2473519 - 2473488 - g 73 -2.8 -4.77036 | opp_overlap 2473509, overlap 2473489 2473490 2473508 CGCCATCATGAAAAA CCCCCGGGCCTACG AGCA CATGGACCCGGAAC TGGTGGGCAACAAGC TERM 3872 2473803 - 2473786 - g 72 -5.5 -4.55887 | gap 1 GTGGAAAAAGAGAAA GACCG-GC CCT GCACGGCC CACGCGACCATACGG Dole_2040 2472529 - 2474157 + | putative alpha-isopropylmalate/homocitrate synthase family transferase TERM 3873 2475110 - 2475086 - g 87 -9.3 -4.59773 | CGGCATGCTGAAAAA CCCCATGACCT ACG AGATCATGCGG CCCGAAGACGTAGGC Dole_2041 2474166 - 2475701 + | 2-isopropylmalate synthase TERM 3874 2475754 - 2475708 - T 91 -11.5 -4.2717 | gap 1, opp_overlap 2475711, overlap 2475710 2475711 ATGATCTGATCAAAA CAGTTCCGGCCGGGCAGATGGT AACC ACCACCTGCCCGGCCTGT-CAA TCTTCCATAGGGCCC TERM 3875 2475752 - 2475710 - T 100 -16.3 -3.73756 | gap 1, opp_overlap 2475711, overlap 2475708 2475711 GATCTGATCAAAACA GTTCCGGCCGGGCAGATGGT AACC ACCACCTGCCCGGCCTGT-C AATCTTCCATAGGGC TERM 3876 2475752 - 2475711 - T 100 -16.5 -2.83772 | opp_overlap 2475711, overlap 2475710 2475708 ATCTGATCAAAACAG TTCCGGCCGGGCAGATGGT AACC ACCACCTGCCCGGCCTGTC AATCTTCCATAGGGC TERM 3877 2475711 - 2475754 + T 74 -11.1 -3.08679 | gap 2, opp_overlap 2475710 2475708 2475711 ATCTGATCAAAACAG TT--CCGGCCGGGCAGATGGT AACC ACCACCTGCCCGGCCTGTCAA TCTTCCATAGGGCCC Dole_2042 2476269 - 2475751 - | hypothetical protein TERM 3878 2476320 - 2476353 + r 100 -23.9 -4.38712 | opp_overlap 2476320 TGGCCATGGTTAAAA GCCCGGCCCGCCC ACTTACCA GGGCGGGCCGGGC TTTTATGCGCCTCCG TERM 3879 2476353 - 2476320 - R 100 -23.9 -4.11216 | opp_overlap 2476320 TGGCCATGGTTAAAA GCCCGGCCCGCCC ACTTACCA GGGCGGGCCGGGC TTTTATGCGCCTCCG Dole_2043 2482473 - 2476378 - | parallel beta-helix repeat-containing protein Dole_2044 2483770 - 2483012 - | hypothetical protein TERM 3880 2483119 - 2483129 + g 78 -4 -4.91712 | ATAAATAATGACTTT TGAA TAT TTCA TTTTTATAGCTTCCA TERM 3881 2483687 - 2483705 + g 86 -4.7 -5.1861 | TTTATTTATATATAG CATTAAA CCACC TTTAATG TTTTTTCCTGATGCA Dole_2045 2486117 - 2483895 - | YD repeat-containing protein TERM 3882 2485019 - 2484990 - G 78 -8.6 -4.18674 | gap 1, overlap 2484987 GTCATAGACAAATAA GCTGGCAGCTGAC AGCTG GT-AGCTGCCGGC GCTGAATGTATAGAC TERM 3883 2485464 - 2485491 + g 83 -9.8 -4.36914 | opp_overlap 2485462 2485460 2485464, overlap 2485466 GTCGACAAAATCAGA GTCGGCCACATA CGCA TAGGTGGCCGTC TTTTCTCCGGCCCCG TERM 3884 2485466 - 2485489 + g 81 -11 -3.79419 | opp_overlap 2485464 2485462 2485460, overlap 2485464 CGACAAAATCAGAGT CGGCCACATA CGCA TAGGTGGCCG TCTTTTCTCCGGCCC Dole_2046 2489470 - 2486741 - | YD repeat-containing protein TERM 3885 2487613 - 2487584 - G 78 -8.6 -4.18674 | gap 1, overlap 2487581 GTCATAGACAAATAA GCTGGCAGCTGAC AGCTG GT-AGCTGCCGGC GCTGAATGTATAGAC TERM 3886 2487797 - 2487808 + g 70 -3.6 -4.66609 | overlap 2487796 ATAGACCGGGTTGTC GGTG ACGC CGCC TTTTTCAATGGCATC TERM 3887 2489131 - 2489148 + g 100 -8.4 -5.08824 | opp_overlap 2489119 CAAGGCCGTTTGCGC CCAGGC CGGTGA GCCTGG TTTTTTGAATGCCCG TERM 3888 2489579 - 2489549 - R 85 -5.5 -5.18726 | gap 1, opp_overlap 2489549, overlap 2489543 2489551 CCGTCAGAACAAAAA CG-TATCGATACCG ATTT CGATAGCGATAGCG ATTTCGACAGGGACA Dole_2047 2490534 - 2489773 - | hypothetical protein TERM 3889 2490555 - 2490575 + r 71 -8.5 -3.68024 | opp_overlap 2490559 TTTCGCTCCTATTGA TATATTAAC ATT GTTAATATA TTCTGTATTAAAAAA Dole_2048 2493455 - 2490537 - | YD repeat-containing protein TERM 3890 2491598 - 2491569 - G 78 -8.6 -4.18674 | gap 1, overlap 2491566 GTCATAGACAAATAA GCTGGCAGCTGAC AGCTG GT-AGCTGCCGGC GCTGAATGTATAGAC TERM 3891 2492043 - 2492070 + g 83 -9.8 -4.36914 | opp_overlap 2492043 2492041 2492039, overlap 2492045 GTCGACAAAATCAGA GTCGGCCACATA CGCA TAGGTGGCCGTC TTTTCTCCGGCCCCG TERM 3892 2492045 - 2492068 + g 81 -11 -3.79419 | opp_overlap 2492043 2492041 2492039, overlap 2492043 CGACAAAATCAGAGT CGGCCACATA CGCA TAGGTGGCCG TCTTTTCTCCGGCCC TERM 3893 2493116 - 2493133 + g 81 -4 -5.08824 | overlap 2493121 CAAGGCCGTTTGTGC CCAGGC CGGTGA GCCGGG TTTTTTGAATGCCCG TERM 3894 2493564 - 2493534 - R 85 -5.5 -5.18726 | gap 1, opp_overlap 2493534, overlap 2493528 2493536 CCGTCAGAACAAAAA CG-TATCGATACCG ATTT CGATAGCGATAGCG ATTTCGACAGGGACA Dole_2049 2494235 - 2493795 - | hypothetical protein Dole_2050 2500057 - 2494250 - | YD repeat-containing protein TERM 3895 2494492 - 2494534 + g 83 -4.9 -5.12474 | AGGGTCTTCCTATTT CGATATCTTTCTTGGCTTC GCCGG GAAGCGAAGAATAATAACG TTTTTCTCTATTGTA TERM 3896 2495293 - 2495264 - G 78 -8.6 -4.18674 | gap 1, overlap 2495261 GTCATAGACAAATAA GCTGGCAGCTGAC AGCTG GT-AGCTGCCGGC GCTGAATGTATAGAC TERM 3897 2495738 - 2495765 + g 83 -9.8 -4.36914 | opp_overlap 2495736 2495734 2495738, overlap 2495740 GTCGACAAAATCAGA GTCGGCCACATA CGCA TAGGTGGCCGTC TTTTCTCCGGCCCCG TERM 3898 2495740 - 2495763 + g 81 -11 -3.79419 | opp_overlap 2495738 2495736 2495734, overlap 2495738 CGACAAAATCAGAGT CGGCCACATA CGCA TAGGTGGCCG TCTTTTCTCCGGCCC TERM 3899 2496811 - 2496828 + g 100 -8.4 -5.08824 | opp_overlap 2496799 CAAGGCCGTTTGCGC CCAGGC CGGTGA GCCTGG TTTTTTGAATGCCCG TERM 3900 2499527 - 2499568 + g 84 -3.6 -5.1861 | overlap 2499529 GGTACAGTCGCCCAC GCCGTCTCCGTCGATGTC GCTTAA GGCGTCGATGCATACGAC TTTTTTGCTGATAAG TERM 3901 2500472 - 2500529 + r 100 -25.7 -5.85737 | opp_overlap 2500477, overlap 2500476 GCGACATGATCTGAT CAAAACCATTCAGGCCGGGCAGATGGT AACC ACCACCTGCCCGGCCTGAATGGATCCG TTTTTTTGTTCCTGT TERM 3902 2500476 - 2500525 + r 100 -29.5 -3.04947 | opp_overlap 2500477, overlap 2500472 CATGATCTGATCAAA ACCATTCAGGCCGGGCAGATGGT AACC ACCACCTGCCCGGCCTGAATGGA TCCGTTTTTTTGTTC TERM 3903 2500524 - 2500477 - R 100 -35.2 -4.2717 | opp_overlap 2500476 2500472 ATGATCTGATCAAAA CCATTCAGGCCGGGCAGATGGT AACC ACCACCTGCCCGGCCTGAATGG ATCCGTTTTTTTGTT Dole_2051 2501335 - 2500589 - | hypothetical protein TERM 3904 2501384 - 2501370 - R 73 -7 -4.22338 | overlap 2501371 AGTAGAACTGTAAAA CCCGGC CGG GCCGGC ATTCGGCCGCCGGAA TERM 3905 2501383 - 2501371 - R 73 -10.5 -3.1268 | overlap 2501370 GTAGAACTGTAAAAC CCGGC CGG GCCGG CATTCGGCCGCCGGA Dole_2052 2502928 - 2501690 - | glycosyl transferase group 1 TERM 3906 2501751 - 2501740 - G 70 -3.6 -4.57569 | overlap 2501741 CCACCCGTTCAAAAA CCCG GCCC CAGG TAAAACCGGAAAGCC TERM 3907 2501768 - 2501757 - G 71 -7.2 -4.18018 | overlap 2501741 CGGCCCCAGGTAAAA CCGG AAAG CCGG TCCTGAATAAGGGAA TERM 3908 2502077 - 2502052 - G 78 -4 -4.91511 | overlap 2502054 2502055 AGGGCAGCACAAAAA TATGGCTTTG TCGCAT CAAAGCCGCA AGCGTGGACTGGTCC Dole_2053 2503203 - 2503544 + | hypothetical protein TERM 3909 2503658 - 2503636 - f 76 -11.3 -3.14564 | GGAGTTGCCCATCAA GAGGCGAAC ACAAG GTTCGCCCC TACCGTATCCGCGAA TERM 3910 2504180 - 2504168 - g 86 -3.3 -5.61881 | opp_overlap 2504168 GGCCAAAAAGAAAAA CCGGT TCG ACCTG TTGATCAAAAAGATG TERM 3911 2504211 - 2504192 - g 75 -4.2 -4.72272 | overlap 2504194 2504198 CCTGTTGATCAAAAA GATGAAGG ACAA CCCCCACC GGCTGCTGTCCACCA TERM 3912 2504312 - 2504336 + G 86 -3.5 -5.59534 | opp_overlap 2504306 2504307 TTCCAACAATGCCGT GGGCATCGC CACCGGC GTGATGACC TTTTTTATTCTGATT TERM 3913 2504719 - 2504707 - g 73 -3.3 -4.8048 | GCGCCATATTAAAAA CAGGC TAT ACCCG CATTCCGGTTTATGA TERM 3914 2505271 - 2505260 - g 75 -3.6 -4.77165 | GCTGGTAGAAGAAAA GGCG TCCC CACC CTCCCTGGATGCAGA Dole_2054 2504046 - 2505314 + | hypothetical protein Dole_2055 2505311 - 2506078 + | DNA uptake lipoprotein-like protein TERM 3915 2506208 - 2506198 - g 87 -6.8 -5.00884 | overlap 2506200 ATCTGTGGCAAAAAA CCCA TGG TGGG CGCCAATGTGAGTCA Dole_2056 2506165 - 2506356 + | ribosomal protein L28 TERM 3916 2506410 - 2506422 + T 93 -2.6 -5.97979 | CCCTCCCCCTCCCCT CTGG GCCTG CCGG TTTTTTTATTCTTCT Dole_2057 2508602 - 2506452 - | (p)ppGpp synthetase I, SpoT/RelA TERM 3917 2507472 - 2507459 - G 74 -2.3 -5.00616 | opp_overlap 2507459 2507460, overlap 2507460 CTTCGTCGGAAAAAA GGTCC AGCC GGACA TTTTCCAGAAATTCG TERM 3918 2508707 - 2508719 + r 85 -10.5 -4.07568 | opp_overlap 2508702 2508700 TTTGCAAACACGGCC CGGCC TTT GGCCG TTTTCCCGCAGCAGA Dole_2058 2510208 - 2508682 - | prolyl-tRNA synthetase TERM 3919 2509736 - 2509725 - G 79 -5.8 -4.82901 | overlap 2509706 2509726 TGGTGCGCAGAAAAA TGCG GGTG CGCA TCTCCCACCGCACCA Dole_2059 2511305 - 2510208 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 3920 2510857 - 2510882 + g 70 -3.9 -4.56597 | overlap 2510848 2510849 2510847 ATGGCCCGGGGCGTC GGCCCGCTG TGTTTTTT CAGCAGGTC TTTTTCCACAGACCC TERM 3921 2511429 - 2511465 + H 85 -8 -4.67038 | opp_overlap 2511411, overlap 2511423 2511412 AAATCGGGATCGGTA TCGCTATCGGTATCGA TTGGC TCGATCCCGATTCCGA TTTTGATTTTGACGG TERM 3922 2512061 - 2512046 - g 86 -6 -4.90013 | overlap 2512047 CAATGCAACGAAAAA GGCCGG GCAA CTGGCC GACAGCATGCGCGCC TERM 3923 2512088 - 2512130 + G 78 -6.3 -4.59773 | gap 2, overlap 2512090 2512091 CGCCCGCATCAACCG CATCGACCGGCTGGTGGCG TCAATCC CGC-ACCGGCCGG-CGGTC TTTTTCCAGATCGGC TERM 3924 2512090 - 2512128 + G 72 -8.9 -3.91506 | gap 2, overlap 2512088 2512091 CCCGCATCAACCGCA TCGACCGGCTGGTGGCG TCAATCC CGC-ACCGGCCGG-CGG TCTTTTTCCAGATCG TERM 3925 2512228 - 2512217 - g 77 -2.2 -5.14563 | gap 1, overlap 2512218 2512219 GGCCGGAGGAAAAAA CCTGG CCG CC-GG TCAAACGCCCTATCC Dole_2060 2511579 - 2512508 + | periplasmic binding protein TERM 3926 2513301 - 2513319 + G 71 -7.4 -4.15222 | GCCTGCTGGGATTTG TGGGGC TGGTGGT GCCCCA TTTCTTCCGGCGCCT Dole_2061 2512505 - 2513518 + | transport system permease protein TERM 3927 2513825 - 2513839 + G 73 -11.4 -3.33261 | TACTGGCCGGCCGTT CGCCCT ACC AGGGCG TTCTGGGCATTCCCG Dole_2062 2513515 - 2514315 + | ABC transporter-related protein TERM 3928 2515358 - 2515341 - g 70 -2.7 -4.80178 | overlap 2515343 CAGCAAGGAAGAAAA CAGCA TCTGCAAC TGCTG CAAGGACTGCTGCGA TERM 3929 2515565 - 2515615 + G 71 -7.1 -4.1891 | gap 4, overlap 2515548 GCTGCGGCATCTGCG CCCGTTTC-TGCCC--C-GAAGGGG CCATC TCCCTTCAGGAGGGCATGAGACGGG TTTATGTTCCGCCCC Dole_2063 2514490 - 2515647 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3930 2515949 - 2515920 - g 87 -7.1 -5.00616 | gap 1, opp_overlap 2515920 TTCCGGCTGAAAAAA GAGAACGGCTCCCG ATA CGCG-GCCATTCCC TTTGTTCACGGCCTG Dole_2064 2515662 - 2516729 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 3931 2516758 - 2516799 + F 82 -12.3 -3.14132 | gap 1, overlap 2516755 TTGCGTTGATCCCCT GCCGCCGGCTTTACGCC-AT GCT ATCGGCGTACAACCGGCCGC TTCGTAGCACAAAAA TERM 3932 2517068 - 2517052 - f 71 -6.5 -4.19735 | CGGGGTAAAAGGAAA GATGGTG AAA CTCCATC GCATGCCAGCCGTTG TERM 3933 2517150 - 2517128 - f 73 -3.2 -4.84359 | overlap 2517101 CCACTCCGACAAAAA TCGGGGGAAG GCG CGGCCCGCGA ATGATCCGCCAGCCG TERM 3934 2517412 - 2517388 - g 100 -12.7 -4.82162 | GACAACAAGACAAAA CCCGCCGGCTC CCT GGGCCGGCTGG AAACCCTGGCCGTTC TERM 3935 2517698 - 2517685 - g 70 -2.3 -4.85782 | CTGGTCAAAAAGAAA GTGGC GCCG GGCAC GGAAAACCTGGCCCG TERM 3936 2517759 - 2517769 + G 76 -4.6 -4.82901 | opp_overlap 2517759 AACGGCCCTGGAAAA CGGC ATG GCTG TTTTTCTGGAGGCCC TERM 3937 2518100 - 2518126 + G 88 -14.4 -3.60525 | overlap 2518104 TGGACGGCGTGATTT CAACGGCCGCCG GGC TGGCGGCCTTTG TTATCTGTCCGTCGA TERM 3938 2518104 - 2518122 + G 100 -13.8 -4.42974 | overlap 2518100 CGGCGTGATTTCAAC GGCCGCCG GGC TGGCGGCC TTTGTTATCTGTCCG Dole_2065 2517238 - 2518368 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Dole_2066 2518586 - 2518386 - | hypothetical protein TERM 3939 2518456 - 2518505 + g 83 -5.6 -5.00616 | gap 1, opp_overlap 2518475 2518476 ATGATTCCCGGCGCA GTCAGGTAGGCCTG-GTAAAGGG GCCGG CCCTGGGCACGGACCTGCCTGGC TTTTTTCAGAAACCA Dole_2067 2519528 - 2518593 - | hypothetical protein TERM 3940 2518890 - 2518873 - G 78 -4.1 -5.00884 | ATCGCGTCCAAAAAA CCCGA CACGGCAC TCGGG TCCACCGTCTCTCCT TERM 3941 2519069 - 2519054 - G 70 -2.4 -4.72272 | overlap 2519056 2519063 CGGTTTTATCAAAAA TACCGG AAAG CCGGCC CCTGGCATGATAGAT TERM 3942 2519641 - 2519651 + r 80 -4.6 -5.03314 | opp_overlap 2519638 2519637, overlap 2519637 TATGCCGCAAACCGC CGGG CGA TCCG TTTTTTGCGGATCGA Dole_2068 2521814 - 2519625 - | ABC-type transport system protein involved in gliding motility auxiliary component-like protein TERM 3943 2520190 - 2520233 + g 78 -3 -5.1356 | opp_overlap 2520203, overlap 2520205 TCCCACGACTGGTCG CTGGAGGAGAACAGGGGCGT GGCC GCGATGCCGTTTTGCTCCAG TTTTTCTTCCTGCAG TERM 3944 2520558 - 2520548 - G 74 -2.4 -4.88067 | AGGGATCCAGAAAAA CCGC CAG GCTG TGTCCCCGCATCAGG TERM 3945 2520926 - 2520948 + g 71 -7.6 -3.95214 | overlap 2520927 GCTCCACCACGTTGA GCAGCGGC AGGGAAA GCCGCCGC TGTTTTTGGGTCAGT TERM 3946 2520927 - 2520950 + g 90 -10.3 -4.67353 | gap 1, overlap 2520926 CTCCACCACGTTGAG CAGCGGCAGG GAAAG CC-GCCGCTG TTTTTGGGTCAGTAC TERM 3947 2521638 - 2521626 - G 72 -4.8 -4.56597 | opp_overlap 2521610, overlap 2521628 GTTTTTCGTGAAAAA GACC TTGAT GGTC AGGGGGCCGGAGACC Dole_2069 2522531 - 2521827 - | ABC-2 type transporter TERM 3948 2522010 - 2521997 - G 86 -3.1 -5.52384 | gap 1 CGGGCAGGAAAAAAA GCATGG CGT CCA-GC AGGGTCAGCACAAAG TERM 3949 2522050 - 2522062 + g 76 -4.8 -4.82901 | opp_overlap 2522050 GCGGCAATGATAAAG GCCA CGATC TGGC TTTTTGTCAGGGCCG TERM 3950 2522261 - 2522223 - G 77 -10.3 -3.88291 | gap 2 CATGATCGCCACAAA GGCC-GATGCC-GCGGCCA GCT TGGCGGCCAGCACCTGGCC CAGGTTCACCGGCAG TERM 3951 2522397 - 2522382 - G 79 -6.8 -4.60487 | gap 1, overlap 2522366 CAGCATGCCGAAAAA GGCC-CG CAG CGTGGCC TGGCCCTGGAGAAAA TERM 3952 2522448 - 2522430 - G 84 -2.2 -5.45802 | overlap 2522434 GGGCGAAAAGAAAAA CCACCCGG TCA CCAGCAGG AAAACCGTGATCACG Dole_2070 2523483 - 2522533 - | ABC transporter-related protein TERM 3953 2523606 - 2523636 + H 74 -6.7 -4.3739 | opp_overlap 2523587 2523608, overlap 2523607 2523608 2523627 TTTGAGTGGCACAAA AACCGGCCCGGTT TTGCC AACCCGGCCGGCC TTTTCTCCACGGGTA TERM 3954 2523607 - 2523635 + H 73 -10.2 -3.22113 | opp_overlap 2523587 2523608, overlap 2523606 2523608 2523627 TTGAGTGGCACAAAA ACCGGCCCGGTT TTGCC AACCCGGCCGGC CTTTTCTCCACGGGT TERM 3955 2523634 - 2523608 - H 100 -13.7 -4.84359 | opp_overlap 2523607 2523606 2523608 2523627, overlap 2523587 TGAGTGGCACAAAAA CCGGCCCGGTT TTGCC AACCCGGCCGG CCTTTTCTCCACGGG TERM 3956 2523608 - 2523634 + H 84 -13.7 -2.52946 | opp_overlap 2523587 2523608, overlap 2523607 2523606 2523627 TGAGTGGCACAAAAA CCGGCCCGGTT TTGCC AACCCGGCCGG CCTTTTCTCCACGGG TERM 3957 2524578 - 2524568 - g 77 -2.4 -5.06414 | overlap 2524569 CTGCTGGAAGAAAAA CCGG ATG CCGT GGCGGCCCGTACCCG Dole_2071 2523794 - 2524684 + | hypothetical protein TERM 3958 2524787 - 2524753 - T 79 -10.7 -3.61232 | gap 1, overlap 2524751 2524754 TGTCTTACACAAACA CCCACGGG-CAAGGCC TGTC GGCCTTGGCCCGTGCC ACCGGTCACCTACGT TERM 3959 2524786 - 2524754 - T 88 -14.2 -2.76418 | gap 1, overlap 2524753 2524751 GTCTTACACAAACAC CCACGGG-CAAGGCC TGTC GGCCTTGGCCCGTGC CACCGGTCACCTACG TERM 3960 2524866 - 2524820 - T 85 -11.8 -3.68351 | gap 1, overlap 2524824 TTGCGAGGAGCGAAA GC-GACGAAGCAATCTCCTTC GCATAT GAACAAGATTGCTTCGCCTGC GGCTCGCAATGACAC TERM 3961 2524861 - 2524824 - T 78 -12.2 -2.66748 | overlap 2524820 GAGGAGCGAAAGCGA CGAAGCAATCTCCTTC GCATAT GAACAAGATTGCTTCG CCTGCGGCTCGCAAT Dole_2072 2525555 - 2524923 - | beta-lactamase domain-containing protein TERM 3962 2525304 - 2525339 + g 86 -3 -5.49729 | overlap 2525306 GGAGAGCATGGGCGC GTCCGCGGCATGGATC AGCA GTTCCGCGCCGGTGGC TTTTTTTAACTCCTT Dole_2073 2525846 - 2525586 - | hypothetical protein TERM 3963 2525939 - 2525910 - R 100 -21.5 -5.06414 | gap 1, opp_overlap 2525911 CGGTTGCAATAAAAA GGCCCGGCACGCGC TTT GC-CGTGCCGGGCC GCAAATTCAGCACAT TERM 3964 2525982 - 2525954 - R 74 -11.1 -2.84732 | CGCAAATTCAGCACA TCATTCCCCGG CCGATTT CCGGGAAATGA CACGGTCTAATCGTG Dole_2074 2527365 - 2525989 - | tryptophan synthase subunit beta TERM 3965 2526577 - 2526615 + g 75 -5.4 -4.62904 | gap 3, opp_overlap 2526551 2526552 2526565, overlap 2526579 AAAGTTGCTGCCGCC GCCGGCG-C-ATCC-GATG ATGA CATCCGGATAGTCGCCGAC TTTTTCAAACTGTTT TERM 3966 2527091 - 2527105 + g 74 -7.8 -4.14392 | TAGTAAATCTTGGCC GGCGTT CCC AGCGCC TTTTCAAGATTGCGG Dole_2075 2527833 - 2527369 - | NusB antitermination factor Dole_2076 2528313 - 2527840 - | 6,7-dimethyl-8-ribityllumazine synthase Dole_2077 2529646 - 2528432 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 3967 2529699 - 2529677 - R 93 -13.4 -3.71649 | opp_overlap 2529675 TTCTCAAATTTCAAA GCGGCAGGGA TCT TCCCCGCCAC GATATGATCTACATA Dole_2078 2530358 - 2529708 - | riboflavin synthase, alpha subunit TERM 3968 2529747 - 2529759 + g 78 -6.2 -4.56597 | AAATTCCATGTCAAT GCCG CCGTC CGGC TTTTTCCCGGACCCG Dole_2079 2531449 - 2530358 - | riboflavin biosynthesis protein RibD Dole_2080 2531976 - 2531521 - | ATP-cone domain-containing protein TERM 3969 2531896 - 2531866 - G 71 -10.3 -3.55444 | CTCGTAGGTGGTAAA CCGGCGGGCACAC TCCAG GCACTCCCGCCGG CGCCGGGTCTCGGTG Dole_2081 2532459 - 2531992 - | CMP/dCMP deaminase zinc-binding Dole_2082 2533711 - 2532452 - | glycine hydroxymethyltransferase TERM 3970 2532637 - 2532656 + g 80 -9.2 -4.2349 | GGGTGCCGATGCGGA CCCCGCTG GTCA CGGTGGGG TTTTCCGTGTCAAAG TERM 3971 2532659 - 2532680 + g 81 -4.3 -5.07486 | overlap 2532660 2532661 GGTCACGGTGGGGTT TTCCGTGTC AAAG GGCACGGCG TTTTTGTTCAGGGTC TERM 3972 2533759 - 2533734 - R 70 -9.6 -3.20723 | GTTCCACCAATTCAA GGCCAGCGGC TTGCGC GCCGCCGCCC CCAGTCCGGGCTACA Dole_2083 2534000 - 2533770 - | acyl carrier protein TERM 3973 2534075 - 2534085 + r 79 -2.4 -5.36364 | TTTCTCTGTTTTCTG ACCG GAC CGGG TTTTTGTCTTTTTCG Dole_2084 2534881 - 2534129 - | 3-oxoacyl-(acyl-carrier-protein) reductase Dole_2085 2535062 - 2534925 - | ribosomal protein L32 Dole_2086 2535840 - 2535280 - | hypothetical protein TERM 3974 2535747 - 2535764 + g 70 -4.8 -4.45485 | overlap 2535749 GATTGATCACCTGCC TTGCCG GAAAGG CGGCGA TTTTCTCCATGTCAT TERM 3975 2535782 - 2535816 + g 80 -2.5 -5.21709 | overlap 2535781 TTCTCCATGTCATCG GCGGCGTCCGGCCGG GTCAG CAGGGCGGCCACCTC TTTTTTGATCTGCCG Dole_2087 2537207 - 2535879 - | hypothetical protein TERM 3976 2536379 - 2536390 + g 90 -7.2 -5.1287 | GGGTCAGCCGCTCAA CGGC CATT GCCG TTTTTTCCGTGTCGC Dole_2088 2538602 - 2537460 - | hypothetical protein TERM 3977 2538088 - 2538108 + g 70 -2.5 -4.72617 | overlap 2538089 TTTTCATCGTCTTTA CCTTCCCAT TTC ATGGAAAGA TTTATTGTTTTCTCC Dole_2089 2539040 - 2538615 - | hypothetical protein Dole_2090 2540209 - 2539037 - | hypothetical protein TERM 3978 2541231 - 2541218 - g 78 -3.1 -5.06414 | overlap 2541220 TTGGGTGAAGAAAAA GATGA TGGG CCATC AGAATGCGGCTCATC Dole_2091 2540420 - 2541250 + | hypothetical protein Dole_2092 2541926 - 2541255 - | DNA repair protein RadC TERM 3979 2541464 - 2541481 + g 78 -6.2 -4.71426 | opp_overlap 2541461 CATCGGCAAATACTT CCCGGG GATGGA CCTGGG TTTTGTTGATCAGGC TERM 3980 2541684 - 2541663 - G 72 -9.4 -3.78329 | gap 1, overlap 2541676 CCGCACGAATTCAAA GGCCG-CGC AGATA GCGGCGGCC TTGGCCATGCCGATG TERM 3981 2541731 - 2541741 + g 77 -8.2 -4.29396 | TATCCTGTGCCGTCA GGGC CGC GCCC TTTTCATCGATAATT TERM 3982 2541881 - 2541899 + g 74 -2.3 -4.88217 | GCTTTTCCCGGGGCC GGTCAGC GGGCG GCAGATC TTTTAGTTTTTTCAT TERM 3983 2541989 - 2542019 + r 85 -10.5 -4.25104 | gap 1, overlap 2541990 TATCTTTATTGGGTG GCATGGGCCAAGCC GGCA GGCTT-GCCCATGG TTTTCATGAAGGCCG TERM 3984 2541990 - 2542018 + r 90 -14 -3.14848 | gap 1, overlap 2541989 ATCTTTATTGGGTGG CATGGGCCAAGCC GGCA GGCTT-GCCCATG GTTTTCATGAAGGCC Dole_2093 2543544 - 2542111 - | restriction modification system DNA specificity subunit TERM 3985 2542291 - 2542306 + g 72 -6 -4.30576 | overlap 2542293 CCGGGCCAGCTTATC CACCCG GGCT CGGGCG TTTTGATAATGGGCC TERM 3986 2543178 - 2543210 + g 90 -2.8 -5.72622 | gap 2 TTTTTAAATTATCTA TTGTTACTTGC--GGC TGT GCCGTGCCGGTAACAA TTTTTTCTTTGTCGC TERM 3987 2543445 - 2543455 + g 70 -4 -4.61482 | CGGGATACAGACCTT GTTT GTT AAAC TTATTTTTTGGAAGG Dole_2094 2544569 - 2543541 - | hypothetical protein Dole_2095 2546011 - 2544566 - | N-6 DNA methylase TERM 3988 2545475 - 2545454 - G 81 -12.3 -3.75024 | gap 1 GGCCACCATTAAGAA CCCGGCCGTG CCG CA-GGCCGGG TCGCAGATGGTAAAG TERM 3989 2545661 - 2545678 + g 78 -3.5 -5.09426 | gap 1, overlap 2545659 CGACCACAGGGTTTC GTCAATCA TGT TGA-TGAC TTTTTTCAGGTTGAC Dole_2096 2548712 - 2546043 - | type III restriction protein res subunit TERM 3990 2547016 - 2547002 - G 74 -12.8 -2.87564 | GGATTTCTTCACACA GCCGGG TGC CCCGGC CCAGCATCTGCACCC TERM 3991 2548143 - 2548164 + g 70 -3.7 -4.66833 | overlap 2548133 TTTGCCCGTACCGGT GGCCATG GCAACCAG CATGGTC TTTTTCCCATTGCCA TERM 3992 2548486 - 2548498 + g 90 -4.7 -5.44119 | opp_overlap 2548483, overlap 2548487 TCCAGTACATTACCG GCGCC GAC GGCGA TTTTTTTGGCCTCGA TERM 3993 2548552 - 2548564 + g 74 -6.9 -4.28018 | opp_overlap 2548552 2548553, overlap 2548553 ACAAACAAGGCATAA TCGGC CGG GCCGG TTTTGGTGGAATATT Dole_2097 2549721 - 2548855 - | UbiA prenyltransferase TERM 3994 2549336 - 2549320 - G 90 -7.2 -5.07107 | CAAACCCTGAAAAAA GCCGGC GATCA GCCAGC TCAACCAGGGATACT TERM 3995 2550558 - 2550543 - g 73 -3.2 -4.74103 | opp_overlap 2550550 TGTGGAAGTGAAAAA CTGCAC CCTG GTGGAG AACCGCACCGCCAGT Dole_2098 2550118 - 2550834 + | sugar fermentation stimulation protein Dole_2099 2550896 - 2551249 + | hypothetical protein Dole_2100 2551914 - 2551255 - | hypothetical protein TERM 3996 2551785 - 2551801 + g 93 -5.7 -5.42862 | overlap 2551787 TGATGATATGGGGCG GCGGCGC GGG GCGTCCC TTTTTTTCCCACTCT Dole_2101 2553908 - 2552019 - | aldehyde ferredoxin oxidoreductase TERM 3997 2553849 - 2553823 - G 74 -2 -5.02476 | overlap 2553824 ACAGGCCCGAAAAAA TCGCCCACCGCG TAC CGCTGCATGCGG TAAAACCCGTTGCCC TERM 3998 2553954 - 2553940 - R 73 -5.6 -4.60487 | overlap 2553947 CACCATTCCGAAAAA GGGGAA AGC TGCCCC GCGAGCTACAATTAC Dole_2102 2554646 - 2553966 - | Crp/FNR family transcriptional regulator TERM 3999 2554163 - 2554221 + g 78 -8.4 -4.11216 | gap 3, opp_overlap 2554176 2554178 2554181, overlap 2554179 2554181 GGGTATCCTTCTGCT CCTTTGCCAGAAACAGCAGGTACCCGGCC AGGC GGCCGGGTACCT-CT-TTTAACG-AAAGG TTTTCCACCTGCACG TERM 4000 2554210 - 2554176 - G 100 -15.1 -3.85698 | gap 1, opp_overlap 2554163 2554179 2554181, overlap 2554178 2554181 CTCCTTTGCCAGAAA CAGCAGGTACCCGGCC AGGC GGCCGGGTACCT-CTT TTAACGAAAGGTTTT TERM 4001 2554208 - 2554178 - G 95 -17.7 -3.51934 | gap 1, opp_overlap 2554163 2554179 2554181, overlap 2554176 2554181 CCTTTGCCAGAAACA GCAGGTACCCGGCC AGGC GGCCGGGTACCT-C TTTTAACGAAAGGTT TERM 4002 2554179 - 2554208 + g 100 -17.9 -4.08064 | opp_overlap 2554178 2554176 2554181, overlap 2554163 2554181 CTTTGCCAGAAACAG CAGGTACCCGGCC AGGC GGCCGGGTACCTC TTTTAACGAAAGGTT TERM 4003 2554206 - 2554181 - G 100 -20.5 -2.89797 | opp_overlap 2554179 2554163 2554181, overlap 2554178 2554176 TTGCCAGAAACAGCA GGTACCCGGCC AGGC GGCCGGGTACC TCTTTTAACGAAAGG TERM 4004 2554181 - 2554206 + g 100 -20.5 -3.63744 | opp_overlap 2554181 2554178 2554176, overlap 2554179 2554163 TTGCCAGAAACAGCA GGTACCCGGCC AGGC GGCCGGGTACC TCTTTTAACGAAAGG TERM 4005 2554281 - 2554293 + g 72 -4.8 -4.63218 | GGCCAGCATGTTAAG CACC AGGGG GGTG TTTTCTTCCAGGAGC TERM 4006 2554796 - 2554783 - H 71 -3.1 -5.00616 | overlap 2554786 CTTCGTGTTAAAAAA CAACC AGCC GATTG AGCCGACAGGACGTT TERM 4007 2555705 - 2555689 - g 79 -7.2 -4.67038 | GGCGCAAAAGGAAAA GCCGGG CGATC CCCAGC GGCTGAAAAAAATCA Dole_2103 2555051 - 2555785 + | metal dependent phosphohydrolase TERM 4008 2555864 - 2555843 - g 87 -7.9 -4.79826 | overlap 2555844 2555847 ATAGACGAGGAAAAA TGCACCGGC TGCG GCCAGTGCG TGCTGGCCTGCGCCG TERM 4009 2555863 - 2555844 - g 73 -11.4 -3.46811 | overlap 2555843 2555847 TAGACGAGGAAAAAT GCACCGGC TGCG GCCAGTGC GTGCTGGCCTGCGCC Dole_2104 2555801 - 2556553 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Dole_2105 2558502 - 2556736 - | PAS modulated sigma54 specific transcriptional regulator TERM 4010 2556934 - 2556953 + g 70 -12.1 -2.85545 | overlap 2556932 2556930 GTCGCCCTGAATTTC CGGCGGC AGATGG GCCGCCG TGATCTTGTTACCGG TERM 4011 2557446 - 2557436 - G 70 -2.4 -4.83169 | ACGGCCCCAGAAAAA GAGC CCC GCAC ATGGCCGAACAGTTC TERM 4012 2558022 - 2557990 - G 100 -6.2 -5.75342 | overlap 2557993 2557994 2558019 TTTGCTGAAAAAAAA GATTTTCCGGCCCA GGTCA TGGGCCAGAACCCC CTCGTGAAGGTTGTC TERM 4013 2558670 - 2558658 - H 73 -10.5 -3.1552 | opp_overlap 2558657, overlap 2558656 CTGTACTTATGAACA GCCGG TGC CCGGC GTTGCATGAACGACC TERM 4014 2559581 - 2559565 - g 81 -2.9 -5.32699 | overlap 2559566 GCAAAGATCAAAAAA CCGGC CCTTTCC GCCGA AGACGTGGCCTTTCG Dole_2106 2558731 - 2560452 + | single-stranded-DNA-specific exonuclease RecJ Dole_2107 2560626 - 2561045 + | hypothetical protein TERM 4015 2562025 - 2561973 - g 100 -14.8 -5.24129 | gap 1, opp_overlap 2561973 2561993 2562004 2562022, overlap 2561976 GCCCGTGAGAAAAAA CACCTGACCGCGGCCCAGGCCGG GGAACTGG CCGGCC-GGTCCGGGGCCAGACG GTTTTCCGTCTTTCA TERM 4016 2562022 - 2561976 - g 85 -15.1 -3.14801 | gap 1, opp_overlap 2561973 2561993 2562004, overlap 2561973 CGTGAGAAAAAACAC CTGACCGCGGCCCAGGCCGG GGAACTGG CCGGCC-GGTCCGGGGCCAG ACGGTTTTCCGTCTT TERM 4017 2562004 - 2562026 + G 74 -6.8 -4.323 | opp_overlap 2561976 2561973, overlap 2561973 2561993 2562022 AGGCCGGGGAACTGG CCGGCCGGTC CGG GGCCAGACGG TTTTCCGTCTTTCAC Dole_2108 2561118 - 2562119 + | ribonuclease Z TERM 4018 2562571 - 2562548 - g 78 -3.9 -4.99972 | gap 1, overlap 2562550 ATAAAAGACGAAAAA TA-CCGGACA GCCCT TGTCCGGGCA CAACGCGCGACCGAA TERM 4019 2562568 - 2562550 - g 80 -10.3 -4.09348 | overlap 2562548 AAAAGACGAAAAATA CCGGACA GCCCT TGTCCGG GCACAACGCGCGACC Dole_2109 2562116 - 2562643 + | putative PTS IIA-like nitrogen-regulatory protein PtsN TERM 4020 2562642 - 2562628 - f 71 -7.1 -4.07568 | overlap 2562630 2562631 CCGGGCCGGCGAAAA CAGGG ACACG CCCTG AAGCAGGGCGGGCCG TERM 4021 2562656 - 2562631 - f 74 -11.1 -2.78032 | gap 1, overlap 2562628 2562630 GGCCGGCGAAAACAG GGACACGCCCTG AAG CAGGGCGGG-CC GGATCGTTATATTCC TERM 4022 2563229 - 2563204 - g 100 -10.3 -5.00616 | GTGGGCGTGAAAAAA GAGGCCTGCCC CCTG GGACTGGCCCC CACTACCAGCACCAC TERM 4023 2563307 - 2563297 - g 72 -5.4 -4.4891 | TTGAGCATCAGAAAA GACT TCA AGTC CAGTGATTTCCAGCG Dole_2110 2562757 - 2563755 + | KpsF/GutQ family protein Dole_2111 2563963 - 2565297 + | diphosphate--fructose-6-phosphate 1-phosphotransferase Dole_2112 2565323 - 2565721 + | hypothetical protein TERM 4024 2565942 - 2565898 - f 83 -7 -4.6951 | gap 2, opp_overlap 2565936, overlap 2565900 AGTACCCAAAAGAAA CATCGCCC--TGCGGCTTGGCC TTC GGCTGCGCCGCAATGGGCGAGG GTCGTCATTGTGGAG TERM 4025 2565940 - 2565900 - f 73 -8.2 -3.95475 | gap 2, opp_overlap 2565936, overlap 2565898 TACCCAAAAGAAACA TCGCCC--TGCGGCTTGGCC TTC GGCTGCGCCGCAATGGGCGA GGGTCGTCATTGTGG TERM 4026 2566045 - 2566073 + F 74 -9.6 -3.51708 | gap 1, opp_overlap 2566060, overlap 2566041 2566046 2566048 GGCCGTTGATGGGTG CCACGGGCCAAGC GACA GCTTG-CCCGTGC TTCGTTTCCGGCATG TERM 4027 2566046 - 2566072 + F 81 -13.1 -2.70704 | gap 1, opp_overlap 2566060, overlap 2566045 2566041 2566048 GCCGTTGATGGGTGC CACGGGCCAAGC GACA GCTTG-CCCGTG CTTCGTTTCCGGCAT Dole_2113 2566289 - 2567692 + | amidophosphoribosyltransferase TERM 4028 2567932 - 2567921 - g 83 -5.8 -5.01732 | opp_overlap 2567921, overlap 2567923 AAGGTGGCCAAAAAA CTGG GCTA CCAG TTCCTTGATGACGCT Dole_2114 2567849 - 2568457 + | hypothetical protein Dole_2115 2570309 - 2568459 - | UvrD/REP helicase TERM 4029 2568501 - 2568489 - G 86 -4.7 -5.28942 | GATTTCAAACAAAAA CCGGC TGC GGCGG TTGAACTGGCCTTTT TERM 4030 2570088 - 2570076 - G 75 -10.5 -3.6682 | CCGCACCCAGGGAAA CCCGG TCT CCGGG ATGCCGGTCAATGCC Dole_2116 2570684 - 2571016 + | hypothetical protein TERM 4031 2571084 - 2571095 + G 74 -7.2 -4.35483 | opp_overlap 2571072 ATACAAAGCCTTCTG GGCC TTGG GGCC TTTGTTCTGATGGCC TERM 4032 2571487 - 2571472 - g 76 -3.2 -5.00616 | overlap 2571473 GGGTGCTGCAAAAAA CCGC GGGCCTGG GCGG CGCCGAAGGCGTGGG Dole_2117 2571066 - 2572307 + | Na+ dependent nucleoside transporter Dole_2118 2574491 - 2572650 - | AMP-dependent synthetase and ligase TERM 4033 2573466 - 2573456 - G 75 -5.4 -4.64766 | CGTAGATTTCAAAAA CATG CTC CATG TTCAGGCATTTTTTG Dole_2119 2574815 - 2574519 - | plasmid stabilization system protein Dole_2120 2575093 - 2574812 - | prevent-host-death family protein TERM 4034 2574980 - 2574958 - G 75 -9.1 -4.07885 | CATTTGCCCCCAAAA GCACGGCCA CACCT TTGCCGTGC TGCGTAATGACCACC Dole_2121 2575505 - 2576485 + | radical SAM domain-containing protein TERM 4035 2576702 - 2576678 - f 73 -10 -3.3907 | opp_overlap 2576659, overlap 2576681 GCAAATCCCAAGGAA TGAGGCGTAC TTGTC GTACGCCGCA GTGACGAGGGGTGCA TERM 4036 2576699 - 2576681 - f 71 -10.3 -2.84841 | opp_overlap 2576659, overlap 2576678 AATCCCAAGGAATGA GGCGTAC TTGTC GTACGCC GCAGTGACGAGGGGT TERM 4037 2577030 - 2577016 - g 74 -7.8 -4.25104 | overlap 2577017 GCTGCTGGATGAAAA CGGGGA ACT TCCCCA CAAGGTGGGGGACCG TERM 4038 2577158 - 2577148 - g 77 -8.2 -4.26076 | CGAGGCCCATCAAAA CCGG ATT CCGG TGGAGGGTAAGGTCA TERM 4039 2578173 - 2578137 - g 76 -5 -4.77165 | gap 2, overlap 2578139 TTGCCGACAAGAAAA TCTCGCTGGCCCCGGCGG ATG CCGAGGGGGCCT-CG-GA CTGGAAGCAGTACAC Dole_2122 2576789 - 2578267 + | 30S ribosomal protein S1 TERM 4040 2578749 - 2578700 - g 87 -9.2 -4.59773 | gap 1, opp_overlap 2578702 2578703, overlap 2578706 CCGCATGGTGAAAAA CAAGTACCGCC-GCCTGCCGGTG GTGGA CAACGGCAGGCTGACGGGCATTG TCTACGTGACCGACG TERM 4041 2578743 - 2578706 - g 87 -15.6 -3.17725 | gap 1, opp_overlap 2578703 2578702, overlap 2578700 GGTGAAAAACAAGTA CCGCC-GCCTGCCGGTG GTGGA CAACGGCAGGCTGACGG GCATTGTCTACGTGA Dole_2123 2578326 - 2578805 + | CBS domain-containing protein Dole_2124 2580368 - 2578812 - | hypothetical protein TERM 4042 2579218 - 2579208 - G 73 -3.2 -4.82901 | GTTCCGGCATAAAAA TCCG GTA CAGA TCGTGCCACAGGCCC TERM 4043 2579853 - 2579826 - G 70 -4 -4.56597 | overlap 2579846 2579847 GGCGCTTCTGAAAAA CAGGGCCGAC ACGACAAA GACCGCCCTG ACTGCCTTGCCGAAA TERM 4044 2580031 - 2580011 - G 100 -15.4 -3.85698 | GCTCGTTGGGATAAA GCGCCCCG GCCGA CGGGGCGC TGCGGTAGTAAAACC TERM 4045 2580073 - 2580045 - G 71 -7.4 -4.25104 | gap 1, opp_overlap 2580052 GCTGCGGTAGTAAAA CCAGCCATCGCCC TGCC GGG-AACGGCCGG TCGGTCCATTGGCGA TERM 4046 2580467 - 2580444 - H 78 -8.1 -4.41895 | AAGTTGGAATCAAAA CCCGCATCG ACGGAA CGATGCTGG GCCCATGTTCACATT TERM 4047 2580594 - 2580604 + G 70 -4 -4.62069 | opp_overlap 2580594 GTCGGCGTCACGATA TTCA GGT TGAA TTTTTCCCATGCCGG TERM 4048 2580873 - 2580861 - g 75 -10.5 -3.68261 | TTAGAACAGCTGAAA CCGGG CGC CCCGG TGATCCTGAGCGACG Dole_2125 2580507 - 2581943 + | pyruvate kinase Dole_2126 2582441 - 2582022 - | response regulator receiver protein TERM 4049 2582290 - 2582259 - G 71 -7.9 -4.07568 | CTTTTCCTGCGAAAA CTCATCCGGCAGC AGAAAG GCGGCCAGATGCG TCAGCATGGCCATTC TERM 4050 2582588 - 2582568 - R 78 -11.3 -3.34398 | overlap 2582566 TGGTTGGGTGAAACA TTTTTACCC ACT GGGTAAAAA TTACCCGCCTAAATG Dole_2127 2584131 - 2582680 - | histidine kinase TERM 4051 2583122 - 2583078 - G 72 -4.8 -4.63527 | opp_overlap 2583079, overlap 2583079 GGATGACCTTAAAAA CGGCCCTGGCTTTGCTTGCG GCGGG CGCCAGCATATCCAGCACCT GCTTCACGATGGTTT TERM 4052 2583143 - 2583200 + g 81 -3.5 -5.21236 | gap 3, opp_overlap 2583182 2583186, overlap 2583146 2583184 2583186 ACGATGGTTTCCATA TCCTGCGGGGTCTTGTCGGGTTTTCTGC GCCGG GC-GAAATCCAG-CAGG-CCCTGCATGA TTTTTGTTATCCGTT TERM 4053 2583768 - 2583778 + g 70 -2.4 -4.77036 | TAAAGCGCCACAATC CACG ATT CGCG TTTTTCATGGTCAAG TERM 4054 2584234 - 2584219 - R 73 -2.4 -5.10163 | overlap 2584220 AACCGGAAAACAAAA CGCGAG AACA CCCGCC CCCTAAAGCTCAGGC Dole_2128 2585639 - 2584314 - | hypothetical protein TERM 4055 2584418 - 2584428 + g 74 -2.4 -5.02074 | TATGGGTCAGCCCGC CCAG GGT CAGG TTTTTTCCCACCTGC TERM 4056 2584503 - 2584540 + g 74 -6.2 -4.53036 | gap 2, opp_overlap 2584503 2584506, overlap 2584506 2584537 ATAGGCTTTTATAAA CGACGGCGGGCACCCGGA AAGT TCCAGGCGCTC-CCG-CG TTTTCGTGTTTCTGG TERM 4057 2584540 - 2584503 - G 72 -8.4 -3.86524 | gap 2, opp_overlap 2584503 2584506 2584537, overlap 2584506 ATAGGCTTTTATAAA CGACGGCGGGCACCCGGA AAGT TCCAGGCGCTC-CCG-CG TTTTCGTGTTTCTGG TERM 4058 2585546 - 2585558 + g 78 -9.1 -4.21194 | opp_overlap 2585546 2585543 TGGGCTTGATAATGA TCCGG TCT CCGGA TTTTAAGTGCTCAAA Dole_2129 2586190 - 2585669 - | hypothetical protein Dole_2130 2586807 - 2586193 - | hypothetical protein TERM 4059 2586436 - 2586465 + g 100 -3.5 -6.11019 | overlap 2586438 CGGTATCCGCAGGGC GAGATCGTGGAGG ACCT TCTCCTTGATCTG TTTTTTTTCGTTTTT TERM 4060 2586438 - 2586463 + g 78 -6.1 -4.63519 | overlap 2586436 GTATCCGCAGGGCGA GATCGTGGAGG ACCT TCTCCTTGATC TGTTTTTTTTCGTTT Dole_2131 2587766 - 2587140 - | hypothetical protein TERM 4061 2587845 - 2587860 + r 77 -10.4 -3.54424 | opp_overlap 2587844 GTGTTTCCAATCCAG TCCCGC CATG GCGGGA TTTCGCAAGGTCAAG Dole_2132 2588718 - 2587981 - | ABC transporter-related protein Dole_2133 2590072 - 2588693 - | recombination factor protein RarA TERM 4062 2588840 - 2588830 - G 91 -6.8 -5.31275 | opp_overlap 2588831, overlap 2588831 2588832 TGGGATGATAAAAAA GGCT GCC AGCC AGCTTTTCCGGCAGG TERM 4063 2589215 - 2589203 - G 82 -6.2 -4.73682 | GCGCAGAATATAAAA CGGG TCTTC CCCG CCGGAAAGCATGCGC TERM 4064 2589387 - 2589419 + g 71 -10.3 -3.61715 | ATGGTGACGCCGGTG CCGGCCGGCCGCAGC AGG GCCGCGGCCTCCAGG TTGTTCAAGGCGGTG TERM 4065 2589613 - 2589629 + g 73 -3 -4.73682 | gap 1, opp_overlap 2589616, overlap 2589616 ACATCAAAGCCGGAA TCACCTC AAAG GAGG-GA TTTTCTGTTGTGGCG Dole_2134 2591557 - 2590181 - | small GTP-binding protein TERM 4066 2590280 - 2590270 - G 84 -2.4 -5.40072 | opp_overlap 2590270 TTTCGCGGAAAAAAA GGCG GAT CGGC GTCTTGTCCAGCCCG TERM 4067 2590420 - 2590448 + g 74 -11 -3.54424 | gap 1, overlap 2590445 2590447 CGTAGTTGAACTTGA GGCGCCGGCCCTT GTGA AAGGG-CGGCTCC TTTGACCGGGTGGCC TERM 4068 2591398 - 2591382 - G 74 -2.1 -5.00616 | overlap 2591383 TCGCCGCTCAAAAAA CCGCCGG TAT CCACCAG TGAAAAGAAAACGCC Dole_2135 2593000 - 2591744 - | diaminopimelate decarboxylase TERM 4069 2592017 - 2592027 + g 70 -2.4 -4.82901 | GTCCACGGTTTCGAC GGGG CCG CCGC TTTTTGTCGGAAGAG TERM 4070 2593536 - 2593519 - g 90 -6.3 -5.24129 | GCCTGGTATAAAAAA CACTTTG GCTA CAAAGCG GTGGGCACACTCAAA Dole_2136 2593168 - 2593641 + | GCN5-related N-acetyltransferase TERM 4071 2594442 - 2594413 - g 77 -10.7 -3.83378 | gap 1, overlap 2594406 GCGGAAAAGACAGAA CCG-GCCACCAACC CGG GGCTGGTGGAACGG ATCGCGCGGCTGGCG Dole_2137 2593645 - 2594526 + | hypothetical protein Dole_2138 2595172 - 2594549 - | hypothetical protein TERM 4072 2594808 - 2594770 - G 70 -4.3 -4.56597 | opp_overlap 2594771 2594772, overlap 2594771 2594772 GGGTGGCGTGAAAAA TCTCGTGGCCCCGGTTG GCGTT CATCCGGGACCCCGCAC TTTCCATGTCCGACT TERM 4073 2595654 - 2595667 + G 70 -3.7 -4.56597 | TGAGTATGCCATGCC CGGCC TTGA GGCGG TTTTTGCGGAAAACA TERM 4074 2596702 - 2596742 + G 100 -4.4 -5.93809 | overlap 2596703 ATGGCCGAAATCTTC GTGGGCCGGGCCTCGGCG GAAAA CGCCGCGGAGCTGTCCAA TTTTTTTTCTAAAAC TERM 4075 2596703 - 2596741 + G 74 -7.9 -4.15201 | overlap 2596702 TGGCCGAAATCTTCG TGGGCCGGGCCTCGGCG GAAAA CGCCGCGGAGCTGTCCA ATTTTTTTTCTAAAA TERM 4076 2597187 - 2597206 + G 95 -13.6 -4.14243 | overlap 2597183 CACCACATCCACCCG CCACGGCA TGTT TGCCGTGG TTTTCAACTCCCGTG TERM 4077 2598160 - 2598136 - g 81 -15 -2.56596 | gap 1, opp_overlap 2598151, overlap 2598132 2598150 2598151 CCTTCCATCAATGTA CGGCCCACGGC AAAT GCCG-GGGCCG ACCAGGCAGTGGATG Dole_2139 2595460 - 2598495 + | hypothetical protein TERM 4078 2598522 - 2598495 - f 80 -12.2 -2.87564 | overlap 2598517 CGAGGCCGTCAGATA GCCCGAATATTT CATA AAATATTCAGGC CAAGCCGCACCGGGC TERM 4079 2599636 - 2599647 + G 70 -2.2 -4.75404 | gap 1, opp_overlap 2599623, overlap 2599616 AAGCTGCGGCGCTCC G-GGG CTT CCCAC TTTTTCATCGGGTTT TERM 4080 2600175 - 2600160 - g 72 -4.6 -4.65895 | overlap 2600162 CTTTTCAGGGAAAAA GGCGTG GCAG CACCCC ACGGCCAAGGGCAGG Dole_2140 2598580 - 2600394 + | radical SAM domain-containing protein TERM 4081 2600432 - 2600383 - T 74 -9.3 -3.62096 | GCGGACTACGTCAAA CAGTTCGTTTAGCCCGGATATTT CATG AAATATCCGGGCTAGCCTCCCTG CCCCACCGCTTTTGC Dole_2141 2601026 - 2600421 - | cation efflux protein Dole_2142 2601699 - 2601043 - | metallophosphoesterase Dole_2143 2603013 - 2601748 - | NADH:flavin oxidoreductase/NADH oxidase TERM 4082 2602455 - 2602444 - G 72 -5.8 -4.41616 | ATGGGGCGAAAGAAA CTGG CTCA CCAG GTATCCGTGCGCCCC TERM 4083 2602682 - 2602696 + g 90 -6.4 -5.24129 | overlap 2602680 TGGTTCAGCTGAATC CAGCAC TGG GTGTTG TTTTTTGTACCGGCC Dole_2144 2603475 - 2603032 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 4084 2603906 - 2603930 + G 81 -11.3 -3.89346 | AGCGACGTGGTGGTG GCCTGCCCCGG CGG CCCGGGCACGC TTTCTGAAATCGCCC Dole_2145 2603603 - 2604088 + | Rossmann fold nucleotide-binding protein Dole_2146 2605326 - 2604124 - | hypothetical protein TERM 4085 2604847 - 2604876 + g 72 -4.7 -4.56775 | overlap 2604848 2604849 GGGCAGATCCAGCTC GGGCAGGGCCCGG CCCA CCGGGGCCGGCAG TTTTTCCACCCACGT TERM 4086 2605291 - 2605278 - G 70 -2.3 -4.82901 | overlap 2605261 2605258 CGGTGGCGATAAAAA CCACC AGCA GGCAG GCATACACCCCGCTT TERM 4087 2605382 - 2605361 - R 83 -6.5 -4.9792 | gap 1, opp_overlap 2605361 2605363, overlap 2605363 GATGTTACAGAAAAA GCGGTCACGG TTA CCG-GACCTC TTTAACCCGCTGTCT Dole_2147 2606256 - 2605570 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 4088 2605640 - 2605660 + g 75 -5.3 -4.56597 | overlap 2605642 TTGATGTTGCCCGAC GATCCGGTT ACC ACCCGGACC TTTTTGCCCAGCCGC Dole_2148 2607638 - 2606328 - | hypothetical protein TERM 4089 2607129 - 2607140 + g 75 -3.6 -4.77438 | overlap 2607120 2607119 GACGATGTGCCGCTG CTGG CGGT CCGG TTTTTCATCGTCAAT TERM 4090 2607889 - 2607907 + r 77 -8.8 -4.14392 | overlap 2607856 GTCACCCGGGGAACT GGTGCGCT CTT ACCGCACC TTTTCACCCTTACCA TERM 4091 2607936 - 2607926 - R 71 -6.8 -4.26076 | opp_overlap 2607925 2607917 2607926 TCACCCTTACCAAAA GAGC AGC GCTC CTTTGGCGGTATCTT Dole_2149 2608828 - 2608097 - | hypothetical protein TERM 4092 2608484 - 2608474 - G 84 -2.4 -5.36441 | opp_overlap 2608477, overlap 2608475 2608477 TCTCCACAGAAAAAA GCAG ATC CAGC ATCTGGTCCTCGATT Dole_2150 2609977 - 2608856 - | hypothetical protein TERM 4093 2609450 - 2609418 - G 74 -7.5 -4.37886 | opp_overlap 2609408, overlap 2609422 GTACGGCCGATAAAA GGAACGGCTCCTTCC AGG GGTTGGAACCGGCCC GTTCCACGAACGGAA TERM 4094 2609483 - 2609469 - G 75 -4.2 -4.7629 | overlap 2609472 CCACGAACGGAAAAA GAACAG CTG CTGTAC CGGCCCCATGCGCCC TERM 4095 2610081 - 2610059 - R 100 -14.9 -5.66338 | AAAGACAACAAAAAA GGCGTGGTG AAAGA CACCACGCC CCTGACAGGTTCAAA TERM 4096 2610101 - 2610120 + r 76 -8.6 -3.99985 | overlap 2610083 2610102 2610110 ACAGGTTCAAACCCG TCGGTTTG CCGC CAAACCGG TTGTTTGCGTCTATA TERM 4097 2610372 - 2610345 - R 90 -9.1 -4.59993 | opp_overlap 2610346, overlap 2610346 AAAGTCAGAAACAAA TCGGCCACACC ACGCCG GGTATGGCCGT TTCAGGTTCCGCAAA TERM 4098 2610371 - 2610346 - R 87 -12.6 -3.34369 | opp_overlap 2610346, overlap 2610345 AAGTCAGAAACAAAT CGGCCACACC ACGCCG GGTATGGCCG TTTCAGGTTCCGCAA TERM 4099 2610346 - 2610371 + r 79 -10.4 -3.66178 | opp_overlap 2610346 2610345 AAGTCAGAAACAAAT CGGCCACACC ACGCCG GGTATGGCCG TTTCAGGTTCCGCAA Dole_2151 2612616 - 2610400 - | RpoD family RNA polymerase sigma factor TERM 4100 2612260 - 2612284 + g 100 -14.3 -4.60924 | overlap 2612276 CTTGGGTTTCCTGTC GGCTGCCGC CTTGACA GCGGCAGCC TTTTTCACAGGTTTC TERM 4101 2612507 - 2612526 + g 78 -4.2 -5.01732 | GCCGCTTTCTTGTTC GCCGGTTT TGCC AAGGCGGC TTTTTTAGCCGCCTT TERM 4102 2612565 - 2612586 + g 70 -2.1 -4.85782 | overlap 2612558 2612543 TGCCCGTTGCGGTAC CCGGCTTTC CGGT GGATGCGGG TTTCTTTTTCACAGA Dole_2152 2613007 - 2612648 - | putative histone H1-like protein TERM 4103 2612673 - 2612683 + g 90 -4.6 -5.4505 | overlap 2612671 2612679 GCTGTTTTGCGTTTC GCTG CCG CGGC TTTTTTCTTCGGAGC TERM 4104 2612711 - 2612735 + g 80 -10.6 -3.94877 | overlap 2612726 AGCCGCCTTTTTCTT GGGCGCTGCC TTCTT GGCGGCGGCC TTCTTCTTCGGCGCT TERM 4105 2612745 - 2612767 + g 78 -8.3 -4.44667 | overlap 2612726 2612747 2612762 GCGGCCTTCTTCTTC GGCGCTGCC TTCTT GGCGGCGGC TTTCTTCTTCGGGGC TERM 4106 2612829 - 2612851 + g 78 -8.3 -4.44667 | overlap 2612831 GCCGCCTTTTTCTTC GGCGCTGCC TTCTT GGCGGCGGC TTTCTTCTTCGGGGC TERM 4107 2612913 - 2612936 + g 91 -8.1 -5.10461 | gap 1, overlap 2612913 GCCACCTTTTTCTTC GGC-GCTGCC TTCTT GGCGGCGGCC TTTTTCTTCGGTGCA Dole_2153 2614845 - 2613004 - | DNA primase TERM 4108 2613538 - 2613568 + g 75 -8.9 -4.07568 | gap 1, overlap 2613543 GGGCCGGGCAGAGCG GCTCCGGC-GGCGG GCTG CCGCCTGCCGCACC TTTTCCAGCACCGCG TERM 4109 2613994 - 2614006 + g 73 -3.3 -4.7373 | overlap 2613995 CAGGGCCGTTCCCAG GGTGG CCA CCACG TTTTTAATGCCGTGG TERM 4110 2614360 - 2614340 - G 84 -6.8 -4.86731 | TGTTTGGAAAGAAAA CGGGTAAG GGCAT CCCACCCG CCGGGAGCATATCCC TERM 4111 2614493 - 2614477 - G 74 -7.9 -4.20696 | GCAGGAATGGTAAAA TGCCGCG GCC CGCTGCA TGACCGAGAGCAACC Dole_2154 2615603 - 2614848 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 4112 2615535 - 2615523 - G 71 -6.9 -4.15565 | opp_overlap 2615523 CGGATCATCGGAAAA CACGG TCT CCGCG TTCATGTCTCCCTGC Dole_2155 2616208 - 2615621 - | imidazoleglycerol-phosphate dehydratase Dole_2156 2616678 - 2616406 - | hypothetical protein TERM 4113 2616886 - 2616896 + G 76 -6.8 -4.42238 | TGGGCTGATGCGTAT CACC ATG GGTG TTTTGCTTGGACTGG TERM 4114 2617117 - 2617132 + G 76 -4.6 -4.77438 | overlap 2617119 GTTCGGCGTGTTCAA GCTCCG ACTG CGGACC TTTTTCGTACTCACT Dole_2157 2616755 - 2617873 + | diguanylate cyclase Dole_2158 2618788 - 2617892 - | LysR family transcriptional regulator TERM 4115 2619165 - 2619153 - g 86 -3.3 -5.5112 | TTCAGGAAGAAAAAA TTCCG GTC CGGGA GCACGGGAGCGCCAC Dole_2159 2618915 - 2619508 + | SirA family protein TERM 4116 2620428 - 2620374 - g 70 -2.7 -4.83615 | gap 2, opp_overlap 2620425, overlap 2620375 2620401 GATTCCCCAGAAAAA GGGCAAGCCG--CCGGTGATCTTCGAC AAG GACGAACACTTCCGGCCCGGCCTGACC ATGGAGCAGCTGACC TERM 4117 2620595 - 2620570 - g 81 -9 -4.2679 | GAATTGGGATTAAAA CCCCTGGCAA AAATCG TTGCCAGCGG ACGGGGGGCCTGCCA TERM 4118 2620900 - 2620864 - g 83 -5.1 -5.15634 | gap 1, opp_overlap 2620896, overlap 2620874 CATGCCATGAAAAAA CGGGGCAAAAGCGTGG GTATGG CCACGC-TCTGCGGCG GCGGCGGCGTCTCTA TERM 4119 2620891 - 2620874 - g 78 -8.4 -4.14615 | overlap 2620864 AAAAACGGGGCAAAA GCGTGG GTATGG CCACGC TCTGCGGCGGCGGCG Dole_2160 2619688 - 2620941 + | acetyl-CoA acetyltransferase TERM 4120 2620968 - 2621009 + F 100 -13.1 -4.18401 | overlap 2620969 TATTGTGTCCATTTG ACCTCAGGCGGAACAAC CAATGACC GTTGTTCCGCCTGAGCC TTTTACCGTCTGTCG TERM 4121 2620969 - 2621008 + F 100 -16.6 -3.10558 | overlap 2620968 ATTGTGTCCATTTGA CCTCAGGCGGAACAAC CAATGACC GTTGTTCCGCCTGAGC CTTTTACCGTCTGTC TERM 4122 2621180 - 2621170 - f 80 -6.8 -4.7153 | overlap 2621162 2621172 AAATAATGGGAAAAA CAGG TTC CCTG CACCGTAGCAGAAGA Dole_2161 2621259 - 2621513 + | peroxiredoxin-like protein Dole_2162 2621583 - 2621981 + | alkyl hydroperoxide reductase TERM 4123 2622012 - 2622047 + F 100 -15.6 -4.4078 | opp_overlap 2622008 2622012 TCATGAGCCAACCGA CGATCCGTTGAAAGCA CACA TTCTTTCGACGGATCG TTTTACTTAAAGCGC TERM 4124 2622047 - 2622012 - f 84 -13.4 -2.55544 | opp_overlap 2622012, overlap 2622008 TCATGAGCCAACCGA CGATCCGTTGAAAGCA CACA TTCTTTCGACGGATCG TTTTACTTAAAGCGC TERM 4125 2622097 - 2622059 - f 100 -17.5 -3.64822 | overlap 2622086 2622088 ATCGTTTTACTTAAA GCGCCGCCCCCCTTTTT GCGGG ACAAAGAGGGGCAGCGC GAGCCCCTTCAAAAA TERM 4126 2622264 - 2622286 + G 100 -11.2 -4.89393 | TGAAAAGGAGGCCCT GGCCGGCGGA CTT TCCCTCGGCC TTTTTATCGCCTTTA Dole_2163 2622124 - 2622669 + | putative membrane protein with signal peptide TERM 4127 2622725 - 2622694 - T 100 -13 -5.61596 | gap 1, opp_overlap 2622713 2622716 2622718, overlap 2622698 2622715 ATTTTCACAAAAAAA GGAAGAGGGGCGCGC AAA GCACGCCCCTCT-CA GGGGGGGATGGTTGT TERM 4128 2622722 - 2622698 - T 100 -19.3 -4.08806 | opp_overlap 2622713 2622716 2622718, overlap 2622694 2622715 TCACAAAAAAAGGAA GAGGGGCGCGC AAA GCACGCCCCTC TCAGGGGGGGATGGT TERM 4129 2622734 - 2622758 + T 83 -11.6 -3.48593 | overlap 2622713 2622718 CCTCTCAGGGGGGGA TGGTTGTGTA GGGGG TACACAACCA TTATATGAACAGCTG Dole_2164 2624683 - 2622866 - | acyl-CoA dehydrogenase domain-containing protein TERM 4130 2624198 - 2624228 + g 78 -6.2 -4.62783 | gap 1 GGGCTCGGTGAGCAG CATG-GTGCCGGC CCACTT GCCGGTATACATG TTTTTGACATAGATC TERM 4131 2624774 - 2624738 - H 76 -8.9 -3.86015 | opp_overlap 2624757 CATGTGCCGTATAAA TGAATGAATACTCACTC AAT GAATGAAGACTCATTCA TTTTTAGCAGGGGTT TERM 4132 2624757 - 2624774 + H 80 -7.1 -4.57341 | opp_overlap 2624738 TGAATACTCACTCAA TGAATGA AGAC TCATTCA TTTTTAGCAGGGGTT TERM 4133 2624857 - 2624845 - H 85 -2.6 -5.61596 | ATGGGCACAAAAAAA GGCC GGGTT GACC GTAAAACGAACGGGT TERM 4134 2625154 - 2625169 + G 100 -11.8 -5.54079 | CTCCCGTCGAAGTCG GCGGCG TGAT CGCCGC TTTTTTCGTTTTTCA TERM 4135 2625423 - 2625434 + G 81 -3.6 -5.03747 | overlap 2625417 CCCATTCTTGCCATC CGGC AATG GCTG TTTTTTCAGGAATTT Dole_2165 2625048 - 2626049 + | diguanylate cyclase TERM 4136 2626152 - 2626142 - g 90 -4.6 -5.35222 | overlap 2626145 AAAAGCCAGAAAAAA GAGC CAG GCCC CGGTGATCACCCTGA TERM 4137 2626255 - 2626233 - g 72 -4.7 -4.63218 | overlap 2626235 2626247 TCGCTGCGAACAAAA GACGCGGTA ACCGA TGCCGCGGC CCGGCGCCTGCTGGC TERM 4138 2626384 - 2626365 - g 72 -6.4 -4.39571 | opp_overlap 2626364, overlap 2626358 CCCACAAAGGCAAAA CGCCTGAT TGAG ATCAGCCG CATTCTGCTCGAACG Dole_2166 2626080 - 2626742 + | DNA-(apurinic or apyrimidinic site) lyase Dole_2167 2626757 - 2628085 + | UDP-glucose/GDP-mannose dehydrogenase TERM 4139 2628359 - 2628349 - g 74 -8.2 -4.1585 | overlap 2628350 TGAGAACCTGCAAAA GGGC GTG GCCC CGGCACCGGAAGCGG Dole_2168 2628146 - 2628820 + | nitroreductase TERM 4140 2628915 - 2628941 + G 74 -11.5 -3.54424 | gap 1 CACGGCATCTTTGCG CGGACGGGCGGC ATCA GCAGCCCG-CCG TTTGACAGCCTCAAC TERM 4141 2629487 - 2629518 + G 70 -5 -4.42962 | gap 1, opp_overlap 2629487 2629486, overlap 2629488 AGCCCACATCGAAAT TGCCGGTCTCTGCAC CCG GTGCCG-GACCGACC TGTTTTTTTCCTATC Dole_2169 2628828 - 2629598 + | hypothetical protein TERM 4142 2630206 - 2630223 + G 70 -4.1 -4.56597 | gap 1, opp_overlap 2630220 CTGGACAACTTTTGT GCCATTGC AAA GCAG-GGC TTTTTCACCGAGCCC TERM 4143 2630367 - 2630343 - g 76 -2.9 -4.96501 | overlap 2630344 GGGCAGAAAAATAAA CTTTACCAC CTGTGGC GTGGCAAAA GACGAGTTTCCCGCC Dole_2170 2629705 - 2630577 + | hypothetical protein TERM 4144 2630685 - 2630714 + T 100 -23.7 -3.10112 | opp_overlap 2630685, overlap 2630688 AAGCGCCGTATAAAA CAAGAGGGGCGGC CGAA GCCGCCCCTCTTG TTAGATCGATTCAGT TERM 4145 2630714 - 2630685 - T 100 -23.7 -4.37658 | opp_overlap 2630685 2630688 AAGCGCCGTATAAAA CAAGAGGGGCGGC CGAA GCCGCCCCTCTTG TTAGATCGATTCAGT TERM 4146 2630688 - 2630711 + T 100 -19.6 -3.69283 | opp_overlap 2630685, overlap 2630685 CGCCGTATAAAACAA GAGGGGCGGC CGAA GCCGCCCCTC TTGTTAGATCGATTC Dole_2171 2636392 - 2630753 - | hypothetical protein TERM 4147 2631418 - 2631406 - G 73 -3.3 -4.75289 | overlap 2631407 CATCATAATAGAAAA TGCCA TCC TGGCC GAACCAATCGGCGTG TERM 4148 2637067 - 2637079 + r 71 -2.7 -4.8384 | TTCATTTTGCCTTAT TTGGT CCC ACTAA TTTTTCAATTGTTTC Dole_2172 2638006 - 2637053 - | hypothetical protein TERM 4149 2637474 - 2637484 + g 71 -6.8 -4.12902 | GTCGTGTTGCAGAGT GCAG AAA CTGC TTTTGCGGCTGATTC Dole_2173 2639027 - 2638218 - | LuxR family transcriptional regulator TERM 4150 2639912 - 2639899 - g 72 -4.5 -4.61231 | CTACATCGCCAAAAA CGATG TCTA CACCG ACCTGTTCAACGTGG TERM 4151 2640373 - 2640355 - g 71 -8 -4.05402 | GCTCAAGGAAAAAGA GCGCCTGG AAA CCGAGCGC AACCTGGTGATTGCC Dole_2174 2639570 - 2640994 + | response regulator receiver modulated metal dependent phosphohydrolase TERM 4152 2641311 - 2641327 + T 95 -12.3 -4.29953 | overlap 2641308 CCAGAGGCCAAGCTG TCACGCC TGC GGCGTGA TTCTTTTGGTACTTT TERM 4153 2641534 - 2641507 - T 78 -11.4 -2.98545 | opp_overlap 2641508, overlap 2641504 2641528 2641529 TTTGGACAATAATGA TCCCGGATATTT CATG AAATATCCGGGT TATACCCCGCGTCAT TERM 4154 2641508 - 2641533 + T 93 -14.9 -3.29144 | opp_overlap 2641507 2641504 2641528 2641529 TTGGACAATAATGAT CCCGGATATTT CATG AAATATCCGGG TTATACCCCGCGTCA Dole_2175 2642202 - 2641546 - | TetR family transcriptional regulator TERM 4155 2641605 - 2641588 - G 71 -10.5 -3.60098 | ACCGGCCACGGTAAA GGCCACG GCCT CGCGGCC GGCCTCAGTAATATC TERM 4156 2642148 - 2642178 + g 95 -6.6 -5.56568 | overlap 2642159 2642161 GACGCTGCTCCTTTT CCCGCTGTCGTCGC AGC GCGGTGCGCGCGGG TTTTTTTGCTCCTGT TERM 4157 2642161 - 2642177 + g 75 -9.3 -3.92314 | overlap 2642159 2642148 TTCCCGCTGTCGTCG CAGCGCG GTG CGCGCGG GTTTTTTTGCTCCTG TERM 4158 2642191 - 2642201 + g 90 -3.2 -5.67967 | overlap 2642189 GGGTTTTTTTGCTCC TGTC ACC GGCA TTTTTTTCTGCTCCT Dole_2176 2644049 - 2642259 - | hypothetical protein TERM 4159 2642647 - 2642624 - G 71 -10.2 -3.62354 | overlap 2642622 CGGGGAAATCAAAGA CCGGGGCTGA AATT CCATCCCCGG AAACGGTGTCAACAG TERM 4160 2642855 - 2642832 - G 78 -9.4 -4.07885 | opp_overlap 2642834, overlap 2642833 CACCCCGGCGGAAAA CTCCCGGCCC ACCA GGGCCGGGTT GTCATCCATCACCGT TERM 4161 2642854 - 2642833 - G 76 -12.9 -3.04517 | opp_overlap 2642834, overlap 2642832 ACCCCGGCGGAAAAC TCCCGGCCC ACCA GGGCCGGGT TGTCATCCATCACCG TERM 4162 2642834 - 2642853 + g 89 -16.4 -3.4252 | opp_overlap 2642833 2642832 CCCCGGCGGAAAACT CCCGGCCC ACCA GGGCCGGG TTGTCATCCATCACC TERM 4163 2643577 - 2643608 + g 77 -10.8 -3.87815 | gap 1, opp_overlap 2643576 2643575 GCGTTGGCCGAAACC GGCAT-GCCCCCGCC GTC GGCCAGGGCAATGCC TTTGTCCAGGTGGAC TERM 4164 2643846 - 2643858 + g 83 -4.7 -5.1417 | opp_overlap 2643847, overlap 2643847 AAAGGTGCTCACATA ACCGG TTT CCGGC TTTTTCATTTTCTGC Dole_2177 2644820 - 2644053 - | enoyl-CoA hydratase/isomerase TERM 4165 2644637 - 2644591 - G 86 -14.5 -3.24708 | gap 1, overlap 2644589 2644587 TAGGCGGCAAACACA TCCTG-TCCGGAACCGCCCTGG CCCG CCAGGTCAGCCCCGGAACAGAA AACCCTGTCCCCCGC Dole_2178 2645360 - 2644836 - | biotin/lipoyl attachment domain-containing protein Dole_2179 2647054 - 2645555 - | carbamoyl-phosphate synthase L chain ATP-binding TERM 4166 2645757 - 2645739 - G 78 -3.8 -5.00616 | opp_overlap 2645740, overlap 2645740 TGGGTGTCCAAAAAA TCGGTAAA GGT TTCACCGT TTCGAAACGGCGCTG TERM 4167 2646494 - 2646482 - G 71 -10.5 -3.57144 | overlap 2646483 TGCCCCATTGCCAAA GGCGG CCG CCGCC TCGCCGGACGCTGCG TERM 4168 2646605 - 2646626 + g 70 -4.3 -4.62069 | CACCGGGTAACCGAT GATCTCGGC ATGG GCCGCCATC TTTTTAAAATCGGAC TERM 4169 2647181 - 2647157 - R 70 -9.9 -3.14564 | overlap 2647160 GCACGTTCCGAGGAA TGAGGCGTACG GAT CGTACGCCGCC GTGACGAGGGACGCA TERM 4170 2647178 - 2647160 - R 90 -14.6 -2.77899 | overlap 2647157 CGTTCCGAGGAATGA GGCGTACG GAT CGTACGCC GCCGTGACGAGGGAC Dole_2180 2648853 - 2647237 - | propionyl-CoA carboxylase TERM 4171 2648930 - 2648896 - R 78 -11.3 -3.37344 | overlap 2648892 TCGGTAGTGAAGCAA GCGGCACAGCCGACT CCGTC AGGCGGCAGTGTCGC AATTCGAAAAAAACG Dole_2181 2650181 - 2649066 - | acyl-CoA dehydrogenase domain-containing protein TERM 4172 2649958 - 2649943 - G 91 -4.6 -5.63504 | overlap 2649944 AAGGCGATAAAAAAA CCGGGA CCGT TTCCGG ACACCGCAATCATGG Dole_2182 2651356 - 2650214 - | acyl-CoA dehydrogenase domain-containing protein TERM 4173 2651776 - 2651720 - R 76 -11.5 -2.78695 | gap 1, opp_overlap 2651723 2651724 2651727, overlap 2651719 2651723 GGCAGATAAATGAAC TGACGCGA-TCCGGGGCTCGGGGTCG CGTTTT CGGCCCCCAGCCCCGGAATCCCTTTA TGTCACGGTCTTGAA TERM 4174 2651773 - 2651723 - R 84 -13.2 -2.6528 | gap 1, opp_overlap 2651723 2651724 2651727, overlap 2651720 2651719 AGATAAATGAACTGA CGCGA-TCCGGGGCTCGGGGTCG CGTTTT CGGCCCCCAGCCCCGGAATCCCT TTATGTCACGGTCTT TERM 4175 2651723 - 2651746 + r 85 -10.2 -4.07568 | opp_overlap 2651723 2651720 2651719, overlap 2651724 2651727 AGATAAATGAACTGA CGCGATCCGG GGCT CGGGGTCGCG TTTTCGGCCCCCAGC TERM 4176 2651724 - 2651772 + r 100 -18.9 -4.04474 | gap 1, opp_overlap 2651723 2651720 2651719, overlap 2651723 2651727 GATAAATGAACTGAC GCGA-TCCGGGGCTCGGGGTCG CGTTTT CGGCCCCCAGCCCCGGAATCCC TTTATGTCACGGTCT TERM 4177 2651727 - 2651768 + r 100 -19.4 -2.73529 | opp_overlap 2651723 2651720 2651719, overlap 2651723 2651724 AAATGAACTGACGCG ATCCGGGGCTCGGGGTCG CGTTTT CGGCCCCCAGCCCCGGAA TCCCTTTATGTCACG Dole_2183 2652277 - 2651774 - | rubrerythrin TERM 4178 2652371 - 2652360 - H 79 -2.2 -5.40072 | overlap 2652365 TTTTTGGCAAAAAAA GTCA AGGC CGAC CGGCAGTCCGCCACC Dole_2184 2652520 - 2653137 + | dephospho-CoA kinase TERM 4179 2653697 - 2653684 - g 72 -5.2 -4.55023 | CCGAAGACCAGAAAA CCGC GTTTGA GCGG GACGTGCTTTCCCAG Dole_2185 2653191 - 2654474 + | lytic transglycosylase catalytic TERM 4180 2654767 - 2654801 + T 100 -10.8 -5.252 | gap 1 ATCAGACGATTACCA CGGCCTCGGGATAGC GACCCA GCTGTTCC-AGGCCG TTTTTTGTCACGATA Dole_2186 2655943 - 2654753 - | peptidase M24 Dole_2187 2657444 - 2656266 - | acetyl-CoA acetyltransferase TERM 4181 2657038 - 2657064 + g 74 -7.8 -4.12188 | opp_overlap 2657059 2657060 TCCTGAATGGCGCCC GGCCCCATGCGG TAG CCGAAACGGGCC TTTTCAAGGTAATAA Dole_2188 2660848 - 2657588 - | methylmalonyl-CoA mutase, large subunit TERM 4182 2658301 - 2658325 + g 87 -7.7 -4.8622 | overlap 2658303 TATGGTACTTGAGCA TGCGGGACCGC TCG GCAGCCCCGTA TTTTTCCTTCAAGGC TERM 4183 2658303 - 2658323 + g 71 -8.1 -4.05402 | overlap 2658301 TGGTACTTGAGCATG CGGGACCGC TCG GCAGCCCCG TATTTTTCCTTCAAG TERM 4184 2658818 - 2658806 - G 78 -3.4 -5.14563 | GGCGGCATTAAAAAA CATG GCCAG CATG ATCGGGGCCGGGCCG TERM 4185 2659374 - 2659411 + g 100 -18.5 -3.92522 | overlap 2659370 2659369 2659367 2659375 2659377 2659398 GTCACCTTTTTCCTG GCATCGGCCAGGGTCTT GTCC AGGGCCCTGGCCGATGG TTTGTCGCCTTCGGC TERM 4186 2659375 - 2659410 + g 100 -22 -2.95192 | overlap 2659370 2659369 2659367 2659374 2659377 2659398 TCACCTTTTTCCTGG CATCGGCCAGGGTCTT GTCC AGGGCCCTGGCCGATG GTTTGTCGCCTTCGG TERM 4187 2659377 - 2659408 + g 100 -18.8 -3.02632 | overlap 2659370 2659369 2659367 2659375 2659374 2659398 ACCTTTTTCCTGGCA TCGGCCAGGGTCTT GTCC AGGGCCCTGGCCGA TGGTTTGTCGCCTTC TERM 4188 2660123 - 2660162 + g 75 -4 -4.81551 | gap 1, opp_overlap 2660108 2660149 CGCCCCGCCGCTCTT GCGCCGGGAGG-GGTCCAC GCA GAGGACCGCCACGCGAAGC TTTTTCGTGTCCATC TERM 4189 2660250 - 2660286 + g 71 -7.2 -4.14472 | gap 1, overlap 2660275 GTAATGCCCACCACC GGCACCCGGC-GCTC CCGGGCCT GAGCCGCCAGGAGCC TTTTGGCCGTCTTGG Dole_2189 2661520 - 2660852 - | TetR family transcriptional regulator TERM 4190 2661722 - 2661742 + H 71 -8.2 -3.72576 | overlap 2661727 GCGGATATACGGTAG GGGCGCAC CTTGT GTTCGCCC TTTGATGGGCAACCA TERM 4191 2661911 - 2661887 - H 80 -7.3 -4.59773 | opp_overlap 2661887 2661893 CTTGACTTTTAAAAA TAACACTGTTA ACT TAACATTGTTA TTTAAACGCGGAGGC Dole_2190 2661930 - 2662601 + | TetR family transcriptional regulator TERM 4192 2662666 - 2662680 + F 71 -4.2 -4.74103 | opp_overlap 2662664 2662678 AGAAACGCAGACAGG TGATGG AAA CCACCA TTTTTCAATTGGAGA TERM 4193 2663199 - 2663185 - g 90 -4.9 -5.42458 | overlap 2663188 AACAAAAAAAACAAA GACCG GCTGT CGGCC ACGGCCACGGACCCC TERM 4194 2663213 - 2663223 + G 74 -8.2 -4.15044 | overlap 2663207 CCACGGCCACGGACC CCGG GGT CCGG TTTCTTGCCGACCCC TERM 4195 2663404 - 2663385 - g 78 -4.2 -4.94992 | gap 1, overlap 2663386 TGAAACCGACAAAAA CGGCGAGCC CTG GG-TGGCCG AGATTCGCCAGGCCC TERM 4196 2664841 - 2664819 - g 75 -9.8 -3.84406 | overlap 2664820 CTGCGAGTACAACAA CCTGCTGGGC CAG GCCCACCAGA CAATCCGGCCCACGC Dole_2191 2662702 - 2665665 + | formate C-acetyltransferase TERM 4197 2665900 - 2665929 + G 86 -8.5 -4.57569 | opp_overlap 2665895, overlap 2665922 AAGGGCAACAGCCTG GATGACGGGCCGG GCAT CCGGTCGGTGATC TTTTTCAAAGGATGC TERM 4198 2666187 - 2666169 - g 73 -11 -3.35224 | opp_overlap 2666171, overlap 2666167 ACAGGTGGGCAAAGA GATGCCGG TCA CCGACATC CTTGAACAGGTGCTG TERM 4199 2666613 - 2666599 - g 90 -7.8 -5.00616 | GCGTTTCTGAAAAAA CTGGGC GTC ACCCAG TCGGCCCTGCTTGCC TERM 4200 2666666 - 2666654 - g 72 -5.5 -4.46212 | opp_overlap 2666661, overlap 2666661 TGTGGCATGACAAAA CCGAC AAG ATCGG CACACCCGACCCTTA Dole_2192 2665849 - 2666772 + | glycyl-radical activating family protein TERM 4201 2667170 - 2667160 - g 83 -8.2 -4.59511 | opp_overlap 2667153, overlap 2667161 2667162 AACAGGCCGCAAAAA CCGG AGC CCGG GTGGTGCTGGTCTCC TERM 4202 2667620 - 2667603 - g 100 -9.1 -5.00884 | ATCGGCGCGAAAAAA CCGGGAT CCGT ACCCCGG CCGGCGGCGGCCCTG Dole_2193 2666832 - 2667842 + | NAD-dependent epimerase/dehydratase TERM 4203 2668655 - 2668666 + G 71 -7.2 -4.1413 | opp_overlap 2668654 AGCACCTCAAAGTAC GCCC TGGT GGGC TTTTCCGAATGTATT Dole_2194 2668160 - 2669002 + | short-chain dehydrogenase/reductase SDR Dole_2195 2670023 - 2669013 - | glyceraldehyde 3-phosphate dehydrogenase TERM 4204 2670323 - 2670298 - g 79 -5.4 -4.80453 | overlap 2670316 2670317 TCAGGAGAAAATAAA GTCCGGCGAC ATGAAA ATCGCCAAAC TGGCCGGGCTTTTAG TERM 4205 2670460 - 2670472 + G 71 -6.9 -4.15044 | CGAGAGTGTGCGGCA GGCCG TGC TGGCC TTTATTGAGGAGAAA TERM 4206 2670507 - 2670489 - g 72 -5.2 -4.4767 | overlap 2670490 TTATTGAGGAGAAAA CCCGGC CCAATCC GCCGGA CATTGACTTTATTCC Dole_2196 2670203 - 2670736 + | hypothetical protein Dole_2197 2671632 - 2670739 - | methionine aminopeptidase, type I Dole_2198 2671820 - 2672224 + | GTP cyclohydrolase I TERM 4207 2672238 - 2672226 - f 85 -10.5 -4.29106 | CCGGAGACCAATAAA CCGGC CTC GCCGG GTGGCGGGTATAAAC Dole_2199 2672264 - 2673337 + | cyclic nucleotide-binding protein TERM 4208 2673350 - 2673340 - T 73 -8.2 -3.81741 | AACCGAGAACTGAAA CGGC GGG GCCG GTACCCCTTCCCCTG Dole_2200 2673730 - 2673410 - | hypothetical protein Dole_2201 2674122 - 2673793 - | hypothetical protein Dole_2202 2675968 - 2674115 - | hypothetical protein TERM 4209 2674329 - 2674354 + g 74 -6.7 -4.46212 | gap 1, overlap 2674330 ACGTTGGTGATCATG TCGGCCAGGCGC AGG GAGCC-GGCCGC TTTTGTGCTCAGGAC TERM 4210 2674502 - 2674514 + g 71 -7.7 -4.06866 | overlap 2674486 CTTCCGGGTCGCCAC CACCT GAT AGGTG TTCTTCTCTTTGTCA Dole_2203 2676822 - 2676007 - | hypothetical protein TERM 4211 2676646 - 2676675 + g 74 -2.7 -4.87318 | overlap 2676647 2676669 CAGCACCCGCACCTC CTGCCGGGCGG ATGCCAGG TCGCCCGACAA TTTTTCGGTTTTCGA Dole_2204 2678243 - 2676843 - | hypothetical protein TERM 4212 2677335 - 2677349 + g 73 -2.8 -4.79352 | CAGTCCGTTGGTCGT CTCTTC CAG GAACAG TTTTCTTCTGCCTGC Dole_2205 2679262 - 2678231 - | Holliday junction DNA helicase B Dole_2206 2679876 - 2679259 - | DNA recombination protein RuvA TERM 4213 2679754 - 2679738 - G 95 -6.5 -5.42862 | AGATGTGGAAAAAAA GCGGG TCCCCCT CCCGC TTGCCCTGCAGGGAC Dole_2207 2680345 - 2679860 - | crossover junction endodeoxyribonuclease Dole_2208 2681224 - 2680397 - | Tol-Pal system YbgF TERM 4214 2681314 - 2681284 - R 100 -17.6 -5.36441 | opp_overlap 2681282 2681281, overlap 2681303 GCTGTACATAAAAAA GCCGGCAGGCCG AATTCAA CAGCCTGCCGGC CGATTTACGATAGTT Dole_2209 2681919 - 2681374 - | peptidoglycan-associated lipoprotein TERM 4215 2681425 - 2681443 + g 70 -12.4 -2.84051 | overlap 2681424 CCAGGCGGTTTCGTT GCTCCTGG GAT CCAGGGGC CTTTCCTCGCCGTAG Dole_2210 2683262 - 2681946 - | beta-propeller repeat-containing to-pal system protein TolB TERM 4216 2682144 - 2682163 + g 86 -8.6 -4.67353 | gap 1 ACCCTGGTCGGCGGT CAGG-GCCA CAG TGGCGCCTG TTTTTACGTCAATGA Dole_2211 2684115 - 2683291 - | TonB family protein TERM 4217 2683732 - 2683771 + g 84 -7 -4.73105 | gap 1, overlap 2683734 2683763 GGCTTCCGGGGCCGC TGCCGGGGCGGTCCTGGGC GAA GCCTTG-ACCGGCGCGGTA TTCTTTTTTGTCGAT TERM 4218 2683866 - 2683896 + g 71 -8.3 -4.08216 | gap 1, overlap 2683828 2683853 CCGGCGGGGCCGGGG CCGG-GGCTGTC TTGCCTGC GACGGCCGCCGG TTTTGACGGCCCTGA Dole_2212 2684581 - 2684159 - | biopolymer transport TolR TERM 4219 2684288 - 2684303 + g 74 -8.2 -4.21194 | opp_overlap 2684287 2684288 2684285 CCCTTTTAGAAACAC CTGCCG GTCC CGGCGG TTTTCCATGATGGCG Dole_2213 2685300 - 2684578 - | Tol-Pal system TolQ TERM 4220 2685240 - 2685223 - G 84 -2.5 -5.47218 | overlap 2685225 GGTGACGGAAAAAAA GAGCAGC AGCA GCAGCAC GAACTGGACCATGAG TERM 4221 2685374 - 2685347 - R 84 -13.6 -2.63596 | opp_overlap 2685330 2685329 2685327, overlap 2685366 2685368 2685369 GGGCAGGTCAGACGA GCCCGAATATTT AATG AAATATCCGGGC GAACCCGGCACAAGG TERM 4222 2685417 - 2685404 - R 73 -2.3 -5.1101 | GCAGCATTTAAAAAA TTGGC AAGA GCCTA CCGGAACTCCCTGTC TERM 4223 2685562 - 2685524 - R 78 -5.2 -4.86822 | overlap 2685527 2685530 AACTATAGAAGAAAA TAAGAACGCCAGAACCAC GGC ATGGTCCTGGCGTCGATG GGATTCGATACCGAT TERM 4224 2685558 - 2685527 - R 100 -12.4 -4.51787 | gap 1, overlap 2685524 2685530 TATAGAAGAAAATAA GAACGCCAGAACCAC GGC ATGGTCCTGGCGT-C GATGGGATTCGATAC TERM 4225 2685556 - 2685530 - R 100 -15.2 -4.33214 | overlap 2685527 2685524 AGAAGAAAATAAGAA CGCCAGAACCAC GGC ATGGTCCTGGCG TCGATGGGATTCGAT Dole_2214 2687543 - 2685615 - | heat shock protein 90 TERM 4226 2685721 - 2685733 + g 71 -7.7 -4.00526 | opp_overlap 2685721 AGATTGATATAATCA GTGAG CTG CTCAC TTTCCTTGTCCGCTT Dole_2215 2689103 - 2687919 - | hypothetical protein TERM 4227 2688044 - 2688073 + g 100 -16.5 -4.11216 | gap 1, opp_overlap 2688069 CGTTGGGCAGGGTGA CGGCCTT-GGCCTG GAC CGGGCCAAAGGCCG TTTTCACCGTGACCG TERM 4228 2688210 - 2688225 + g 75 -4 -4.8048 | gap 1, opp_overlap 2688207 CAGTACGCAAAGCAG GATACCG GGC CGGT-TC TTTTTCATGTGCACC TERM 4229 2688916 - 2688928 + g 87 -4.1 -5.40072 | overlap 2688904 CCATCGCCATGAATG TCGAT TAC GTCGA TTTTTTTCGCCCGAA Dole_2216 2690252 - 2689113 - | peptidase T-like protein TERM 4230 2689263 - 2689287 + g 76 -3.4 -4.88918 | opp_overlap 2689260, overlap 2689273 CTGAAAAAAGATGTT GGCGTCCGAC CCGCC GCCGGAGGTC TTTTCTTTCAGGTCC TERM 4231 2690087 - 2690118 + g 71 -11.5 -3.24232 | overlap 2690062 2690085 2690083 GGACCACCAGGTTGC CGCTGTTGCCGCC TATGCC GGCGGCGGCATCG TCTATTTCCGGGACG TERM 4232 2690752 - 2690779 + G 80 -9.8 -4.11235 | overlap 2690735 2690775 CGGGTTTTCAACCCT GTCGGTAACCGG GCTT CTGGTCACCGGC TTTATCTGCTGGTTC Dole_2217 2690624 - 2691298 + | phosphatidylserine decarboxylase Dole_2218 2691295 - 2692134 + | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 4233 2692807 - 2692783 - g 85 -2.8 -5.46129 | GAACAAACGAAAAAA GCTGACCCTG TGCGG CAAGACCAAC GTGCTGACCTTTGCC Dole_2219 2692232 - 2693299 + | 3-isopropylmalate dehydrogenase TERM 4234 2693751 - 2693694 - g 70 -3.9 -4.62069 | gap 1 CGGTTATTCCAAAAA GGGCATCATCGCCAACCCCAACT-GTTC AAC GATCCAGATGGTGGTGGCCCTGGCGCCC ATTCACAAAAAGGCC Dole_2220 2693320 - 2694342 + | aspartate-semialdehyde dehydrogenase TERM 4235 2694350 - 2694384 + F 78 -9.2 -4.07568 | opp_overlap 2694348, overlap 2694351 ATTTCTAAAACCACC CGTGCACCCGCCTG AAAATAC CGGGCGGATGCACC TTTTCGCGGAGGCAG TERM 4236 2694351 - 2694383 + F 83 -12.7 -3.04398 | opp_overlap 2694348, overlap 2694350 TTTCTAAAACCACCC GTGCACCCGCCTG AAAATAC CGGGCGGATGCAC CTTTTCGCGGAGGCA Dole_2221 2694378 - 2694872 + | transcription elongation factor GreA TERM 4237 2695088 - 2695098 + GF 80 -4.6 -5.00616 | opp_overlap 2695075 2695078, overlap 2695078 2695083 2695090 AACATGGCCGCGGCC CTGG CGT CCGG TTTTTTCAAGGCAGA Dole_2222 2694905 - 2695270 + | DNA-directed RNA polymerase, omega subunit TERM 4238 2695364 - 2695392 + GF 89 -13.1 -3.53012 | opp_overlap 2695363 CCGGTACGACATGAT CGCCGACGGGGAC CGT GTCTGCGTCGGTG TTTCCGGCGGCAAGG TERM 4239 2695607 - 2695621 + GF 80 -7.1 -4.57353 | opp_overlap 2695609, overlap 2695611 GCACAGCGACGCCAA CAGGG AAAAC CCCTG TTTTCTCTGCTCCCG Dole_2223 2695227 - 2696021 + | PP-loop domain-containing protein TERM 4240 2696254 - 2696229 - g 72 -4.7 -4.62336 | gap 1, opp_overlap 2696230 2696244, overlap 2696230 2696231 ACTGGACCGGAAAAA CGGCTGCCAGCA GAC TGTTGGCA-CCA TCAACATGTATGTGG TERM 4241 2696407 - 2696385 - g 73 -3.2 -4.83269 | overlap 2696344 AGACCAGATGAAAAA GGACCTGGAC GCG GCCTCGGCCC ACATGGAAGTCACCT Dole_2224 2696128 - 2696910 + | hypothetical protein Dole_2225 2698207 - 2696900 - | peptidase S13 D-Ala-D-Ala carboxypeptidase C TERM 4242 2697065 - 2697051 - G 75 -5.6 -4.60797 | opp_overlap 2697051 2697053, overlap 2697053 TCTTCATACAGAAAA TACCCG GCC CGGGTG TTTACCCCCGACAAC TERM 4243 2697125 - 2697112 - G 75 -3.7 -4.7254 | overlap 2697114 ACTCGTTACCAAAAA CGCGC ATTC GCCCG GCATAGGGCTCGAAC TERM 4244 2697457 - 2697469 + g 75 -5.5 -4.56597 | CCACCTTGCCCGATA CATGG CAC CCGTG TTTTTCCAGAAACCA TERM 4245 2697757 - 2697747 - G 84 -2.4 -5.40072 | CCGGGGGCAAAAAAA GAGG CGT CCAC CAGAATGTCACCCAC Dole_2226 2699621 - 2698194 - | putative aminopeptidase 1 TERM 4246 2698741 - 2698755 + g 72 -9.2 -3.66018 | opp_overlap 2698733 2698734 AAAAACAGGGCCACG GCCGTC CGG GGCGGC TTCTTCAGGTCCTGA TERM 4247 2699343 - 2699355 + g 71 -10.5 -3.61398 | opp_overlap 2699339 2699340 GCTGCCCACAACCGC GGCGG CCA CCGCC TTGTTGCGAAACACC Dole_2227 2700245 - 2699805 - | D-tyrosyl-tRNA(Tyr) deacylase TERM 4248 2700281 - 2700266 - R 100 -10.4 -4.52589 | CCCCTCGACACAAAA CCGGCT GAAA AGCCGG AACAAAAAATTACAC Dole_2228 2700780 - 2700331 - | 3-dehydroquinate dehydratase, type II Dole_2229 2701448 - 2700789 - | ribulose-phosphate 3-epimerase Dole_2230 2702462 - 2701491 - | PASTA domain-containing protein Dole_2231 2703861 - 2702455 - | sun protein TERM 4249 2702551 - 2702527 - G 72 -4.9 -4.58685 | opp_overlap 2702517, overlap 2702529 2702545 2702546 AAATGTCCGGAAAAA GCCCGGGTC GTCTGTA AACCCGGCC ACCGCCGGAACATCG Dole_2232 2704795 - 2703854 - | methionyl-tRNA formyltransferase TERM 4250 2703965 - 2703952 - G 72 -9.5 -3.78934 | TGCGGGTGACAACAA GGCCG CCGT CGGCC GTGGCCACCACCAGC TERM 4251 2704207 - 2704230 + g 72 -9.5 -3.64703 | CCGCCTCCGGGTCCT GGGGCACCG GGGTTG CGGTGCCGC TTTCGATCCGGGCCA Dole_2233 2705301 - 2704780 - | peptide deformylase Dole_2234 2706298 - 2705345 - | riboflavin biosynthesis protein RibF TERM 4252 2706360 - 2706396 + r 85 -6 -5.00895 | gap 1 AAAAACTTTTTCCGG CAGACGCAATGATTATT ATCC GGTAA-CACTGCGTCTG TTTTTCTCTGATACG Dole_2235 2706983 - 2706627 - | response regulator receiver protein TERM 4253 2707229 - 2707219 - H 71 -8.2 -3.65991 | opp_overlap 2707226 ATCTTTTCAACACAA GCCC TTG GGGC ACCGCCCTGCTTAAC TERM 4254 2708266 - 2708254 - g 78 -6.2 -4.63218 | opp_overlap 2708254 2708253 GCGCCCTGAACAAAA CCGG CCGGT CCGG ATTTGTCATGGCCAA TERM 4255 2708451 - 2708468 + G 73 -12.7 -2.71712 | opp_overlap 2708435 2708431, overlap 2708450 GCCGTTCCTGGGAGC GCCGCAC CCCA GTGCGGC ATTTCCCGCGCGGAC Dole_2236 2707311 - 2708897 + | N-6 DNA methylase Dole_2237 2708897 - 2710135 + | restriction modification system DNA specificity subunit Dole_2238 2710132 - 2712246 + | hypothetical protein TERM 4256 2712679 - 2712700 + G 90 -11.5 -4.37092 | CCGGCGAGATGTATA CCCGCCGGG CCGA CCTGGTGGG TTTTGTCAACGGCCT TERM 4257 2713487 - 2713498 + G 76 -7.2 -4.44974 | opp_overlap 2713474, overlap 2713474 2713473 2713496 CATGCGCACGGCTTT GCCG AACG CGGC TTTTCTGGCCTTTAC TERM 4258 2713929 - 2713902 - g 90 -6.2 -5.24449 | gap 1, overlap 2713904 2713918 2713919 GATAAAGTGAAAAAA CACTGGGCGGCAA AGA TCGCCACCCTG-G AGGCGGAAAAGGATA TERM 4259 2713928 - 2713904 - g 80 -9.9 -4.23298 | overlap 2713902 2713918 2713919 TAAAGTGAAAAAACA CTGGGCGGCAA AGA TCGCCACCCTG GAGGCGGAAAAGGAT TERM 4260 2714144 - 2714127 - g 91 -7.7 -5.10029 | gap 1, opp_overlap 2714126 2714132 ACCAAGTTCAAAAAA CCGG-ACG ATC CGTTCCGG CTGGTATTTGTCTGC TERM 4261 2714654 - 2714670 + G 75 -8.7 -4.07568 | overlap 2714655 GCCCGTCAAGGTGAT TGCGGAT AAA ATCCGCG TTTTGGCACCGCCGG Dole_2239 2712243 - 2715383 + | HsdR family type I site-specific deoxyribonuclease Dole_2240 2715473 - 2715997 + | hypothetical protein Dole_2241 2716097 - 2716432 + | addiction module killer protein Dole_2242 2716429 - 2716728 + | putative transcriptional regulator TERM 4262 2717562 - 2717547 - g 81 -11.8 -3.72576 | opp_overlap 2717558 GCGCTGGCCAGGAAA CCGGCC GGCG GGCCGG AACCGAAAACGTGAC Dole_2243 2716853 - 2717995 + | aminotransferase class V Dole_2244 2718022 - 2718468 + | hypothetical protein TERM 4263 2718472 - 2718458 - f 77 -4.9 -4.99435 | CCGAACAATTAAAAA GAGGC GACTA GCCCC GGCGTGACAACCGCA TERM 4264 2718586 - 2718621 + G 90 -11.8 -4.20516 | gap 1, opp_overlap 2718584 2718575, overlap 2718591 AGCACCTGGAAGATC GTATCGCGGGGCGGGTG CCC TACCCGCCC-GCGCTCC TTTCTTCAGTCAAGC TERM 4265 2718591 - 2718618 + G 85 -15.6 -3.11702 | gap 1, opp_overlap 2718584 2718575, overlap 2718586 CTGGAAGATCGTATC GCG-GGGCGGGTG CCC TACCCGCCCGCGC TCCTTTCTTCAGTCA TERM 4266 2719330 - 2719343 + G 79 -5.9 -4.77036 | opp_overlap 2719319 ACTACGGGATTGCCC CGGGG GTTG CCCTG TTTTTCATCATCGGG Dole_2245 2718534 - 2719799 + | CDP-alcohol phosphatidyltransferase TERM 4267 2720006 - 2719992 - f 70 -2.1 -4.91109 | overlap 2720000 CCGGTATCAGAAAAA TCAGA AAACA CCTGA AAAAAGTGGGCTGGC TERM 4268 2721289 - 2721301 + G 93 -9.1 -4.72497 | GCTCAGCGTTATCAG CGGCA GTT TGCCG TTTTATTCATCGATC TERM 4269 2721456 - 2721445 - g 80 -4.4 -4.98531 | CGGCTAAACGAAAAA GACA GTGT TGTC GGCCGTCTGGGGGGA Dole_2246 2720233 - 2722527 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Dole_2247 2723914 - 2722631 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4270 2722736 - 2722751 + g 76 -4.6 -4.8048 | ATAGTCCGGCACTTC GGCCAT TTTA ACGGCC TTTTTCCTGTCGCAG TERM 4271 2723572 - 2723548 - G 71 -7.7 -4.08216 | opp_overlap 2723548 CCAGCTGGTTTAAAA CGGCACGCACC TCG GATTCGGGCCG GTTCTCTTTTTTGGC TERM 4272 2724079 - 2724055 - H 76 -10 -3.67173 | overlap 2724058 ACAAAGCCCGAAGAA TGAGGCGTAC TTGGC GTACGCCGCA GTGATGAGGGGTGCA TERM 4273 2724076 - 2724058 - H 72 -10.3 -2.93817 | overlap 2724055 AAGCCCGAAGAATGA GGCGTAC TTGGC GTACGCC GCAGTGATGAGGGGT Dole_2248 2724195 - 2725019 + | enoyl-CoA hydratase/isomerase TERM 4274 2726116 - 2726166 + G 79 -14 -3.03972 | gap 1, opp_overlap 2726153 2726155, overlap 2726114 2726116 TTCGCGGATACGGTA GGGGCTAACC-CTGTGTTTGCCC CTTGAT GGGCAAGCACAGTGGGCTGCCCC TGTAATATTTTGTCC Dole_2249 2725054 - 2726142 + | hypothetical protein TERM 4275 2726591 - 2726620 + F 89 -6.2 -5.20333 | CCCGCCGATGCCGAT GCAGGGCCGCGC ATGAAC GCGCCGGCCGGC TTTTTGTTGTCCGTC TERM 4276 2726675 - 2726648 - f 73 -7.9 -4.0342 | gap 1, opp_overlap 2726664 2726673, overlap 2726664 2726666 GTCAAGCAATAACAA GTGTCCATCCAT TTAAC ATGGATG-ACAC CATGTGGTGTTTCCA TERM 4277 2728332 - 2728316 - g 72 -6.5 -4.29928 | opp_overlap 2728317, overlap 2728317 AATGAATATTGAAAA GGTCGGT TGC ACCGACT GTCATGCAAAAAAGT Dole_2250 2726733 - 2728349 + | cytochrome c class III TERM 4278 2728630 - 2728613 - g 73 -3.3 -4.7373 | opp_overlap 2728621, overlap 2728614 2728615 GTACTTGACGAAAAA CGCCGCA CCGA TGCGGAA TCGTTTACCGTGGTC Dole_2251 2728370 - 2729431 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Dole_2252 2729431 - 2730639 + | polysulphide reductase NrfD Dole_2253 2730684 - 2730818 + | hypothetical protein Dole_2254 2730882 - 2731559 + | hmc operon protein 5 TERM 4279 2731873 - 2731857 - g 81 -4.3 -5.06414 | CCTGGCCAACAAAAA GGATCCG GAG CAGGTCC CCTCCTACAAGATTC TERM 4280 2732339 - 2732325 - g 71 -7.8 -4.07885 | CATTGCCGGTGAAAA CTGGAC CGT GCCCAG CCGAGGATGGGAAGA TERM 4281 2732908 - 2732933 + G 74 -2.5 -5.00884 | overlap 2732909 CGGGATATGGAAGAG GTCTACCGGAT CGGC ATCCGCTGGAG TTTTTTAAAGCCACT Dole_2255 2731615 - 2732997 + | hypothetical protein Dole_2256 2733076 - 2734002 + | UspA domain-containing protein TERM 4282 2734023 - 2734013 - f 71 -4 -4.76041 | CATAGGCAGTAAAAA TCTT GAA AAGA GAGGTGTCACATGGC Dole_2257 2734034 - 2734396 + | response regulator receiver protein Dole_2258 2734386 - 2735972 + | multi-sensor signal transduction histidine kinase TERM 4283 2736577 - 2736537 - g 71 -10.3 -3.58533 | overlap 2736538 CTACAAGCTGGCAAA GGCCCCGGAGGATATCTCC GTG GGCGACATCGTCCGGGTCA TGGAGGGCGGCACAT TERM 4284 2736576 - 2736538 - g 76 -13.8 -2.74799 | overlap 2736537 TACAAGCTGGCAAAG GCCCCGGAGGATATCTCC GTG GGCGACATCGTCCGGGTC ATGGAGGGCGGCACA Dole_2259 2736331 - 2736795 + | BadM/Rrf2 family transcriptional regulator TERM 4285 2737269 - 2737259 - g 75 -5.4 -4.60487 | CATCATTTTTAAAAA CCAT TCA ATGG ATCCTTACCCTGCCG Dole_2260 2736850 - 2737554 + | beta-lactamase domain-containing protein TERM 4286 2737546 - 2737563 + F 73 -7.1 -4.18506 | GTTCTCTCACTGATT CACAAAT AACG ATTTGTG TTGTTTTAACGATCC TERM 4287 2738358 - 2738378 + G 73 -11.1 -3.35046 | overlap 2738356 CTGGCCATCTCCATC GAGGCCCAG GCC CTGGACCTC TATTTCCGGGCATCG Dole_2261 2737665 - 2738504 + | rhodanese domain-containing protein TERM 4288 2738921 - 2738892 - g 70 -4.1 -4.67011 | overlap 2738893 AAGCCCATTGAAAAA CTCCTGGAGGCCC GACA GCGCGTCCTGGAA ATCATCTCCCGGAAA TERM 4289 2738960 - 2738939 - g 79 -7.2 -4.57073 | overlap 2738941 CATCTCCCGGAAAAA GGCGGCCA TTGTCG TGGCCGGC GGCGGGCCGGCGGCG TERM 4290 2739197 - 2739210 + G 70 -2.3 -4.84359 | ATCGGGCAGGACCAT CGAGG CAGA CCTGG TTTTTCTGGCCCTGG TERM 4291 2739309 - 2739327 + G 75 -8.8 -4.07568 | AACGCCTTTCTCCAG TCCCCGGA CCA TCCGGAGA TTTTCGGCGGCGGCG Dole_2262 2738505 - 2739617 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 4292 2739681 - 2739661 - g 88 -15.5 -3.62478 | opp_overlap 2739666 2739667 GAACTAACCGGGAAA CTGAAGGCG GCA CGCCTTCAG GCGGCCACGCTTTCC Dole_2263 2739619 - 2739981 + | hypothetical protein Dole_2264 2740103 - 2740813 + | putative GAF sensor protein TERM 4293 2740928 - 2740904 - T 70 -10 -3.17714 | overlap 2740907 GCAAATTCCGAGGAA TGAGGCGTAC TTAGC GTACGCCGCA GTGACGAGGAATGCA TERM 4294 2740925 - 2740907 - T 71 -10.3 -2.78395 | overlap 2740904 AATTCCGAGGAATGA GGCGTAC TTAGC GTACGCC GCAGTGACGAGGAAT Dole_2265 2742279 - 2740978 - | XRE family transcriptional regulator TERM 4295 2741284 - 2741256 - G 76 -13.7 -2.78384 | overlap 2741259 GCCGCCGGCACGATA TCAGGCGCCGGGC CAT GCCCGGCACCGGC GACGGCATGGCCTCG TERM 4296 2741281 - 2741259 - G 95 -18.4 -2.66316 | overlap 2741256 GCCGGCACGATATCA GGCGCCGGGC CAT GCCCGGCACC GGCGACGGCATGGCC TERM 4297 2743963 - 2743934 - g 71 -12.9 -2.57162 | opp_overlap 2743931 2743927, overlap 2743926 2743925 2743924 AAAAACGGGAAGCCA TCTGGGGCAACTG GGAC CAGCTGCCCAAGA CCGTTTCTTCCATCG Dole_2266 2742607 - 2744262 + | ferredoxin-dependent glutamate synthase TERM 4298 2744334 - 2744286 - f 100 -18.6 -3.49475 | opp_overlap 2744299, overlap 2744294 2744299 GCGATCCCCAGACAA CACCACAAC-AAAAGGCCTTCCTG GTT CAGGAAGGCCTTTTTGTT-TGATG TCCCCAACGGCCACG TERM 4299 2744326 - 2744294 - f 100 -17.9 -3.55842 | opp_overlap 2744299, overlap 2744286 2744299 CAGACAACACCACAA CAAAAGGCCTTCCTG GTT CAGGAAGGCCTTTTT GTTTGATGTCCCCAA TERM 4300 2744299 - 2744321 + F 100 -17.8 -5.35815 | opp_overlap 2744294 2744286 2744299 AACACCACAACAAAA GGCCTTCCTG GTT CAGGAAGGCC TTTTTGTTTGATGTC TERM 4301 2744321 - 2744299 - f 100 -17.8 -4.83722 | opp_overlap 2744299, overlap 2744294 2744286 AACACCACAACAAAA GGCCTTCCTG GTT CAGGAAGGCC TTTTTGTTTGATGTC Dole_2267 2744658 - 2745095 + | hypothetical protein TERM 4302 2745241 - 2745231 - g 79 -6.8 -4.71426 | overlap 2745233 TCCTTATTAAGAAAA GCCT ATA AGGC TATAGCTAAGAGTGA TERM 4303 2745506 - 2745516 + G 70 -4.6 -4.44046 | TTCACACCTATCTTG GGCT TCG GGCC TTTATTTGCAATCAC Dole_2268 2745129 - 2745722 + | hypothetical protein TERM 4304 2747196 - 2747163 - g 79 -13.9 -3.07816 | opp_overlap 2747162 2747163 2747165, overlap 2747165 GTTTCAGTTACGTAA CACCACGGCGGTCAC CGTC GTGACCGGCGTAATG CTTGTGCTGGGTACA Dole_2269 2746162 - 2747499 + | sodium:neurotransmitter symporter Dole_2270 2747763 - 2747987 + | hypothetical protein Dole_2271 2747984 - 2748274 + | hypothetical protein TERM 4305 2748337 - 2748358 + T 100 -15.9 -4.74103 | opp_overlap 2748337 CCCCGGAACAAAAAA GGCCTTCCC AAAC GGGAAGGCC TTTTTGCGTTACAAA TERM 4306 2748358 - 2748337 - T 100 -15.9 -5.4505 | opp_overlap 2748337 CCCCGGAACAAAAAA GGCCTTCCC AAAC GGGAAGGCC TTTTTGCGTTACAAA Dole_2272 2750572 - 2748401 - | glutamine synthetase catalytic region TERM 4307 2749574 - 2749591 + g 77 -2 -5.08011 | gap 1, opp_overlap 2749573 2749576, overlap 2749576 GGGTTTCTCATGAAG CA-GGCA CTCCA TGCCGTG TTTTTTGGCGATTTT TERM 4308 2750193 - 2750205 + g 93 -9.1 -4.73388 | GACGCGTCCGGTTCG CCCTG GAT CAGGG TTTTTCCTGAAAATT TERM 4309 2750797 - 2750782 - H 77 -4 -5.06052 | TGAAAAAATACAAAA TCGTAA GTTA TCACGA AACGGGGGAATTGGC Dole_2273 2751034 - 2752365 + | glutamine synthetase, type I Dole_2274 2752960 - 2754090 + | glutamate synthase (NADPH) TERM 4310 2754619 - 2754588 - gf 72 -10.2 -3.04715 | gap 1, opp_overlap 2754596, overlap 2754587 CACCTGCGGGAAAAC GGATGGATTCCCCCG GTG CGGGAG-ATCTATCC CCTGATCATCGGCGG Dole_2275 2754054 - 2755688 + | ferredoxin-dependent glutamate synthase TERM 4311 2755735 - 2755709 - f 100 -10.8 -4.55295 | opp_overlap 2755711 2755712, overlap 2755711 2755712 GCCGGCATAAACAAA CAGCCACCGGCT GCA AGCCGGTGGGTT TAAATCAAGCACCGG TERM 4312 2755733 - 2755711 - f 95 -13.4 -3.88703 | opp_overlap 2755711 2755712, overlap 2755709 2755712 CGGCATAAACAAACA GCCACCGGCT GCA AGCCGGTGGG TTTAAATCAAGCACC TERM 4313 2755711 - 2755733 + F 93 -13.4 -3.64703 | opp_overlap 2755711 2755709 2755712, overlap 2755712 CGGCATAAACAAACA GCCACCGGCT GCA AGCCGGTGGG TTTAAATCAAGCACC TERM 4314 2755732 - 2755712 - f 100 -16.9 -2.92499 | opp_overlap 2755711 2755712, overlap 2755711 2755709 GGCATAAACAAACAG CCACCGGCT GCA AGCCGGTGG GTTTAAATCAAGCAC TERM 4315 2755712 - 2755732 + F 100 -16.9 -2.78679 | opp_overlap 2755712 2755711 2755709, overlap 2755711 GGCATAAACAAACAG CCACCGGCT GCA AGCCGGTGG GTTTAAATCAAGCAC TERM 4316 2755809 - 2755798 - g 70 -3.6 -4.69664 | overlap 2755801 2755802 GATATCAGGGAAAAA CGAG GGCA CCCG CTTAGAGTCCCGGGT TERM 4317 2757038 - 2757025 - g 78 -9.5 -4.08216 | opp_overlap 2757025 GCAGCTGCTGCAAAA CGGCC ATGA GGCCG TTGTATATGACACAT Dole_2276 2755763 - 2758093 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 4318 2758140 - 2758178 + F 90 -8.9 -4.564 | gap 2, overlap 2758142 2758142 2758145 CAAATAAGACTTGAT CCGGA-CCGGGCA-GGG ACTGTTC CCCGTGCCCGGTTCCTG TTTTGATTTCAGGTT TERM 4319 2758142 - 2758176 + F 82 -10.1 -3.88396 | gap 2, overlap 2758142 2758140 2758145 AATAAGACTTGATCC GGA-CCGGGCA-GGG ACTGTTC CCCGTGCCCGGTTCC TGTTTTGATTTCAGG TERM 4320 2758142 - 2758175 + F 81 -12.5 -2.92314 | gap 1, overlap 2758140 2758142 2758145 AATAAGACTTGATCC GGACCGGGCA-GGG ACTGTTC CCCGTGCCCGGTTC CTGTTTTGATTTCAG TERM 4321 2758145 - 2758172 + F 77 -10.6 -3.58476 | gap 1, overlap 2758142 2758142 2758140 AAGACTTGATCCGGA CCGGGCA-GGG ACTGTTC CCCGTGCCCGG TTCCTGTTTTGATTT TERM 4322 2758255 - 2758237 - f 73 -5.2 -4.57569 | TCATGTCCCGAAAAA CAGTTGCG TCT CCCAACCG CCTGGAAATCCACAC TERM 4323 2758460 - 2758471 + G 72 -4.4 -4.61633 | CCACTTTGTCCCAGT CCAT CGCC ATGG TTTTTGAAGATATAT TERM 4324 2758491 - 2758501 + G 70 -2.4 -4.82901 | opp_overlap 2758491 TGAAGATATATTGAA GGTC ATT GTCC TTTTTCTGGACAAGG TERM 4325 2758735 - 2758713 - g 78 -6.2 -4.6759 | opp_overlap 2758716, overlap 2758716 AAGACTGGAAGAAAA CAAGCAGCTC AAG GAGCGGCTCA TTCAGGAGTTCAAGA TERM 4326 2758732 - 2758716 - g 78 -7.9 -4.43909 | opp_overlap 2758716, overlap 2758713 ACTGGAAGAAAACAA GCAGCTC AAG GAGCGGC TCATTCAGGAGTTCA TERM 4327 2758767 - 2758756 - g 84 -2.2 -5.46657 | GAGTTCAAGAAAAAA GAGA TCAC CCTC AACAACACTCTCAAT Dole_2277 2758339 - 2758896 + | hypothetical protein TERM 4328 2759091 - 2759034 - T 75 -11.9 -2.70946 | opp_overlap 2759035, overlap 2759031 2759033 2759065 TGGCCGCAGAAACAT TGTAGGGGCACCCCCTGTAGTTGCCCA TCAA TGGGCGAACACAAGGTTCGCCCCTACT GTATATCCGCGAATG TERM 4329 2759035 - 2759090 + T 74 -11 -2.98942 | opp_overlap 2759031 2759033 2759034 2759065 GGCCGCAGAAACATT GTAGGGGCACCCCCTGTAGTTGCCCA TCAA TGGGCGAACACAAGGTTCGCCCCTAC TGTATATCCGCGAAT TERM 4330 2759137 - 2759119 - T 100 -16 -3.06815 | ATGTCCCGCAACACA GTCCCGCC AAT GGCGGGAC CAGGACGACTCGTCC Dole_2278 2761680 - 2759173 - | transport protein, putative TERM 4331 2759983 - 2760001 + g 70 -12.4 -2.83299 | opp_overlap 2759982, overlap 2759982 GCCCAGGGAGAGGAC CTTGCCGG TGA CCGGCAGG CTTTCCATGTAGTCA TERM 4332 2761086 - 2761105 + g 78 -3.4 -5.06414 | TATCGTCCTCTTCCG GCGAAAGG CCTG CCTCCCGC TTTTTATTGCCCAGC Dole_2279 2762291 - 2761680 - | toluene tolerance family protein TERM 4333 2762004 - 2761988 - G 75 -3.6 -4.82901 | GCCGGTCGACAAAAA GGTCGA CAAAC TCGGCC TGCTGATCAGCGGAA Dole_2280 2763242 - 2762295 - | VacJ family lipoprotein TERM 4334 2762691 - 2762673 - G 87 -8 -4.86621 | opp_overlap 2762673, overlap 2762675 AGTGTTAATCAAAAA CCGCGCGG TCT CCACGCCG GTACTGTGCACCTTG TERM 4335 2763581 - 2763571 - g 72 -4.6 -4.63932 | overlap 2763573 CATCGCCGAACAAAA CGGC TGG GCCA TGGCGGCCCTGGGCA TERM 4336 2763880 - 2763866 - g 75 -5.6 -4.57569 | GTATCCCGGGAAAAA GGGCTG CCC CACCCC CACCTGACCATTAAA Dole_2281 2763515 - 2763958 + | hypothetical protein TERM 4337 2764259 - 2764280 + G 76 -5.1 -4.75372 | gap 1 CCTCCATTGTCTTTC TCGG-CCTGG GCG CCATGACCGA TTTTTCCTCCCTGCT TERM 4338 2764852 - 2764863 + G 71 -7.2 -4.18018 | GGCATCTTTGCCCTG GGCG CCGT CGCC TTTTCCGTGGCCACA Dole_2282 2763985 - 2765115 + | sodium ion-translocating decarboxylase, beta subunit Dole_2283 2765269 - 2765826 + | hypothetical protein TERM 4339 2765855 - 2765829 - f 88 -7.3 -5.15682 | gap 1, overlap 2765831 2765832 AAAACAGAAATAAAA CATCCGGCGCTG GGCG CAACGCCGG-TA AACGGAGGAGTAAAC TERM 4340 2765854 - 2765831 - f 85 -10.2 -4.15514 | overlap 2765829 2765832 AACAGAAATAAAACA TCCGGCGCTG GGCG CAACGCCGGT AAACGGAGGAGTAAA TERM 4341 2765853 - 2765832 - f 86 -13.7 -3.06868 | overlap 2765831 2765829 ACAGAAATAAAACAT CCGGCGCTG GGCG CAACGCCGG TAAACGGAGGAGTAA TERM 4342 2766271 - 2766288 + G 70 -4 -4.56597 | opp_overlap 2766282, overlap 2766271 2766275 ATATCGCCGATGCCA GGGTGG AGATAC CCTCCC TTTTTGAGGCGGGCA TERM 4343 2766801 - 2766788 - g 70 -3.7 -4.58283 | overlap 2766789 2766790 CAACTTTGTCAAAAA GCCCG ATGC CGGGG TCACCGACGAGATGT Dole_2284 2765871 - 2767160 + | fructose/tagatose bisphosphate aldolase-like protein TERM 4344 2767384 - 2767368 - g 72 -4.4 -4.58283 | gap 1, opp_overlap 2767370 2767380, overlap 2767370 2767380 CAACCTCTTCAAAAA CGGCTCT ACGA AG-GCCG TGAGCGTCCTTTTTG TERM 4345 2767380 - 2767393 + G 75 -3.7 -4.83615 | opp_overlap 2767368 2767370 2767380, overlap 2767370 AAACGGCTCTACGAA GGCCG TGAG CGTCC TTTTTGTACCCGCTG Dole_2285 2767320 - 2767856 + | NUDIX hydrolase TERM 4346 2768018 - 2767987 - T 100 -22.4 -5.78622 | opp_overlap 2767987 TGAGGCCAAAAAAAA CCATGCCGCCCGCA TTCA TGCAGGCGGCATGG TGTAATGGGTTAAAA TERM 4347 2767987 - 2768018 + T 100 -20.2 -2.82933 | opp_overlap 2767987 TGAGGCCAAAAAAAA CCATGCCGCCCGCA TTCA TGCAGGCGGCATGG TGTAATGGGTTAAAA Dole_2286 2772799 - 2768045 - | YadA domain-containing protein Dole_2287 2773419 - 2772844 - | hypothetical protein TERM 4348 2773163 - 2773151 - G 86 -4.7 -5.27023 | overlap 2773152 ACCGGAAAAAGAAAA GCCCC GCT GGGGT TGGGGCCGGTGAGAA TERM 4349 2773450 - 2773440 - R 76 -8.2 -4.07568 | CCCCTTGTCTCAAAA GGCC TCC GGCC AGAAGGAGAGCCCAC TERM 4350 2773691 - 2773653 - R 100 -17.6 -4.87291 | opp_overlap 2773653 2773658 GACGCCAATGAAAAA CGCCTGGTGTCCCA TCTCTTTTTTT TGGGACACCAGGCG TTTCAAATTTCAAAC TERM 4351 2773653 - 2773691 + r 100 -17.6 -3.71649 | opp_overlap 2773653, overlap 2773658 GACGCCAATGAAAAA CGCCTGGTGTCCCA TCTCTTTTTTT TGGGACACCAGGCG TTTCAAATTTCAAAC Dole_2288 2774871 - 2773717 - | iron-containing alcohol dehydrogenase TERM 4352 2774141 - 2774167 + g 100 -9.5 -4.87626 | gap 1 ATTTCCGAAAGCATG GCAG-CAGCGGT GAGA ATCGCTGACTGC TTTTTGCTGTTGACC TERM 4353 2774294 - 2774306 + g 72 -4.7 -4.59511 | ACGATCCGGTAAAGC GCTGC CAG GCCGC TTTTTGCCACCTCTT TERM 4354 2774395 - 2774418 + g 74 -8 -4.15833 | opp_overlap 2774393 2774396, overlap 2774396 CGAAGAGGCAAATTC ATGGGCGCCG GTTC CGGCCCCCAC TTTTAAGGTCATGGT TERM 4355 2774490 - 2774476 - G 81 -4.2 -5.09426 | GGGAATGGCAAAAAA GGGC GGCAGAG GCCC TGCGATATTGTCATC Dole_2289 2776760 - 2774901 - | aldehyde ferredoxin oxidoreductase TERM 4356 2775001 - 2775014 + g 86 -4.5 -5.25803 | gap 1, overlap 2774985 CGCATCTCCTCCAGG GGCACG GTG CG-GCC TTTTTTGTCGCACTT Dole_2290 2777978 - 2776794 - | iron-containing alcohol dehydrogenase TERM 4357 2777378 - 2777407 + g 80 -10.7 -4.08216 | overlap 2777391 2777393 TTTCCACGGCGTGGG TCATGGCGTCCAT GCCC GTGGCCGCCGTGA TTTTGGGGGGCATGG Dole_2291 2778535 - 2778002 - | hypothetical protein TERM 4358 2778580 - 2778566 - H 71 -7 -4.07568 | TGTGGTGCTTTAAAA CGGCGC GCC GTGCCG GCAAAACGATTCGGC TERM 4359 2778732 - 2778710 - H 76 -2.5 -5.26875 | overlap 2778711 CCGGGAATCAAAAAA CCCGCCAGG TCCTT CCCGGCCGT TGACAGGAACAGAGG TERM 4360 2779559 - 2779547 - g 71 -10.5 -3.53761 | CAATTGTTCCGGAAA GCGGC ATT GCCGC TGTGACCGTTGCGGG TERM 4361 2779845 - 2779866 + G 76 -3.5 -5.00616 | overlap 2779846 2779848 2779854 CGGCCCCCGGGGCAT CGTGGCCGC GGCC GTGGCCTCC TTTTTTGCCGCCGCC TERM 4362 2780301 - 2780269 - g 79 -6.9 -4.65895 | opp_overlap 2780274 2780284 CTGTTCACGGAAAAA GTCAAGCAGGAGGCC CGT GGCATCACGCTTTAC GCGGCACTGAAGACC Dole_2292 2778808 - 2780721 + | sodium/hydrogen exchanger Dole_2293 2781522 - 2780737 - | acetolactate decarboxylase TERM 4363 2781591 - 2781545 - R 85 -10.3 -4.07568 | gap 1, opp_overlap 2781545 2781551 CCCTTCCTTTCAAAA TCGAAATCGGGAT-CGCTATCG GTAT CGGTATCGAATTCCGATTTCGA TTGTAGTCGATAACT TERM 4364 2781545 - 2781591 + r 93 -14.7 -3.42699 | gap 1, opp_overlap 2781545, overlap 2781551 CCCTTCCTTTCAAAA TCGAAATCGGGA-TCGCTATCG GTAT CGGTATCGAATTCCGATTTCGA TTGTAGTCGATAACT TERM 4365 2781668 - 2781643 - R 90 -14.1 -3.16683 | gap 1, overlap 2781653 AGTGCACTGGAGTAA CACGGGCAAACC GGG GGTT-GCCCGTG CCCGAAGGGCAAGAG Dole_2294 2783201 - 2781858 - | pyridine nucleotide-disulphide oxidoreductase dimerisation region TERM 4366 2782872 - 2782836 - G 88 -14.3 -3.59979 | GCCGGGCAGGTCAAA CCCCGGCAGGTCCGGCA CCA TGGCCGACCCGCCGGTG GCGATCAGCAGCCTG Dole_2295 2783810 - 2783256 - | hypothetical protein TERM 4367 2783846 - 2783872 + r 71 -6.4 -4.2717 | GAATTGGTTTATATT GCCGGCGCAAAA CCG TATCGCCCCGGC TTTTCGTCACATCAT Dole_2296 2784696 - 2783884 - | MscS mechanosensitive ion channel TERM 4368 2783946 - 2783956 + g 80 -4.6 -4.92239 | TGGAAATCCCGTTCT GGTC AAA GGCC TTTTTCACTTTTTCG Dole_2297 2785936 - 2784800 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4369 2785172 - 2785160 - G 77 -10.5 -3.86015 | opp_overlap 2785160 CATCTTTTCCAGAAA GGCCG GGC CGGCC TGGTTCCACTGGATC TERM 4370 2785941 - 2785952 + r 90 -5.8 -5.37043 | TTTTCCTGCATTTGT CAGG TATA CCTG TTTTTTCTATCAAAT TERM 4371 2786089 - 2786065 - R 70 -10 -3.15579 | overlap 2786068 GCAAGTTCCGAGGAA TGAGGCGTAC TTAGC GTACGCCGCA GTGACGAGTGAATGC TERM 4372 2786086 - 2786068 - R 71 -10.3 -2.78018 | overlap 2786065 AGTTCCGAGGAATGA GGCGTAC TTAGC GTACGCC GCAGTGACGAGTGAA Dole_2298 2786500 - 2786129 - | hypothetical protein TERM 4373 2786899 - 2786878 - g 75 -5.7 -4.58685 | overlap 2786880 AAATGTTTTTAAAAA TTCCCCTGC TGCA GCGGGGGGA CATCCAATCCCGAAT TERM 4374 2787018 - 2787040 + G 72 -4.7 -4.65895 | ATTTATTCCACCAGC GCCTCCCAG TTTTT CTGGATGGC TTTTTCCCTGCGGGA TERM 4375 2787311 - 2787334 + G 73 -13.2 -2.71791 | gap 1, overlap 2787310 GGCAGGCATTCTCCT G-CCGGACCTG GGG CAGGTCCGGAC CTTTGGGGAAACCGT Dole_2299 2786616 - 2787962 + | hypothetical protein Dole_2300 2789421 - 2787973 - | hypothetical protein TERM 4376 2788921 - 2788885 - G 71 -7.1 -4.21811 | GATTGAAGAGAGAAA CACGCCCAGGGCCACCG CAA CAAAGGCCTTGAGGGTG GAGCCCCGGCCCAGC TERM 4377 2789062 - 2789052 - G 71 -8.2 -4.07568 | overlap 2789053 GGGCGGCGCTGAAAA GGCC GCC GGCC ACCGAGGCGGTCAGG TERM 4378 2789514 - 2789490 - R 70 -10 -3.17714 | opp_overlap 2789471 2789466, overlap 2789493 GCAAATCCCGAGGAA TGAGGCGTAC TTGTT GTACGCCGCA GTGACGAGGGGGGCA TERM 4379 2789511 - 2789493 - R 71 -10.3 -2.78395 | opp_overlap 2789471 2789466, overlap 2789490 AATCCCGAGGAATGA GGCGTAC TTGTT GTACGCC GCAGTGACGAGGGGG Dole_2301 2790580 - 2789567 - | hypothetical protein Dole_2302 2791433 - 2790600 - | hypothetical protein TERM 4380 2790656 - 2790670 + g 72 -9.2 -3.65351 | CCTGCGTGGACGGCG GTCCGG ACA CCGGGC TTTCCCTGCCGGTGA Dole_2303 2792240 - 2791653 - | ribonuclease H TERM 4381 2792032 - 2792069 + g 100 -15.7 -5.40072 | gap 1, opp_overlap 2792033, overlap 2792033 CCGATGCCAACAGTA AGGGCGTCCCTGTA-GAT GTC GTCATACAGGGACGCCCG TTTTTTTGCGGAAAG TERM 4382 2792033 - 2792068 + g 100 -19.2 -3.83561 | gap 1, opp_overlap 2792033, overlap 2792032 CGATGCCAACAGTAA GGGCGTCCCTGTA-GAT GTC GTCATACAGGGACGCCC GTTTTTTTGCGGAAA TERM 4383 2792068 - 2792033 - G 100 -18.5 -3.37245 | gap 1, opp_overlap 2792033 2792032 CGATGCCAACAGTAA GGGCGTCCCTGTA-GA TGTCG TCATACAGGGACGCCC GTTTTTTTGCGGAAA Dole_2304 2792651 - 2792298 - | ribosomal protein L19 Dole_2305 2793289 - 2792717 - | hypothetical protein Dole_2306 2794115 - 2793276 - | tRNA (guanine-N1)-methyltransferase TERM 4384 2794153 - 2794104 - G 100 -9.5 -5.03314 | gap 1, opp_overlap 2794106 2794111 2794112 2794120, overlap 2794106 2794120 GGCAGGGCTAAAAAA TTTCAATTTCATGAAAGATACGGG CTA CCCGTATCTTTCACGAG-TTGATT TGGCCGCAGGTGCAA TERM 4385 2794151 - 2794106 - G 87 -16.5 -2.76422 | gap 1, opp_overlap 2794106 2794111 2794112 2794120, overlap 2794104 2794120 CAGGGCTAAAAAATT TCAATTTCATGAAAGATACGGG CTA CCCGTATCTTTCACGAG-TTGA TTTGGCCGCAGGTGC TERM 4386 2794106 - 2794151 + g 91 -16.5 -3.53444 | gap 1, opp_overlap 2794106 2794104 2794120, overlap 2794111 2794112 2794120 CAGGGCTAAAAAATT TCAATTTCATGAAAGATACGGG CTA CCCGTATCTTTCACGAG-TTGA TTTGGCCGCAGGTGC TERM 4387 2794111 - 2794147 + g 95 -17.5 -3.51232 | opp_overlap 2794106 2794104 2794120, overlap 2794106 2794112 2794120 CTAAAAAATTTCAAT TTCATGAAAGATACGGG CTA CCCGTATCTTTCACGAG TTGATTTGGCCGCAG TERM 4388 2794112 - 2794146 + g 95 -18.8 -2.70525 | opp_overlap 2794106 2794104 2794120, overlap 2794111 2794106 2794120 TAAAAAATTTCAATT TCATGAAAGATACGGG CTA CCCGTATCTTTCACGA GTTGATTTGGCCGCA TERM 4389 2794138 - 2794120 - R 93 -13.2 -3.76492 | opp_overlap 2794112 2794111 2794106 2794120, overlap 2794106 2794104 TTCAATTTCATGAAA GATACGGG CTA CCCGTATC TTTCACGAGTTGATT TERM 4390 2794120 - 2794138 + r 91 -13.2 -3.58305 | opp_overlap 2794120 2794106 2794104, overlap 2794112 2794111 2794106 TTCAATTTCATGAAA GATACGGG CTA CCCGTATC TTTCACGAGTTGATT Dole_2307 2794909 - 2794397 - | 16S rRNA processing protein RimM TERM 4391 2794772 - 2794722 - G 100 -19.8 -4.19735 | opp_overlap 2794723, overlap 2794723 GCCCCCAAAAGGAAA TGGCGACCATGGGGTTTGCACCAT TCA ATGGTGCAAACCCGCTCGTCGCCT TTGGGACCTCGTAGA TERM 4392 2794771 - 2794723 - G 100 -23.3 -3.11359 | opp_overlap 2794723, overlap 2794722 CCCCCAAAAGGAAAT GGCGACCATGGGGTTTGCACCAT TCA ATGGTGCAAACCCGCTCGTCGCC TTTGGGACCTCGTAG TERM 4393 2794723 - 2794771 + g 100 -23.3 -3.56092 | opp_overlap 2794722 2794723 CCCCCAAAAGGAAAT GGCGACCATGGGGTTTGCACCAT TCA ATGGTGCAAACCCGCTCGTCGCC TTTGGGACCTCGTAG Dole_2308 2795154 - 2794918 - | hypothetical protein TERM 4394 2795308 - 2795324 + r 73 -2.1 -5.03715 | GGGCGAAGAATCTAT GAGACCG CAA CGCCCTC TTTTTTCAGAATGCT Dole_2309 2795552 - 2795304 - | ribosomal protein S16 TERM 4395 2795609 - 2795575 - R 72 -10.7 -2.57132 | gap 1, opp_overlap 2795575 2795574, overlap 2795574 TTTTCTCCTTAGAAC GGCATCATGCCGCGGC CCAG ACCGC-GCATGCCGCC CTTGTTGATTTTTTT Dole_2310 2796899 - 2795568 - | signal recognition particle protein TERM 4396 2796051 - 2796063 + g 76 -6.9 -4.45168 | opp_overlap 2796051 GCGGTCCGGGTGAAA CGCCT CCA GGGCG TTTGTCTTTTCGCCC TERM 4397 2797030 - 2797000 - H 90 -7.6 -5.08088 | gap 2, overlap 2796987 AAGCGGGAAGAAAAA CCACCCGC-G-GGC GACCT GCCACAGCGGATGG CCGAAAACTAAACCC TERM 4398 2797959 - 2797947 - g 79 -6.9 -4.60889 | AACGATTCGGAAAAA GACGC ATT GCGCC TGGTCAAGCTGCTGC TERM 4399 2798158 - 2798130 - g 77 -13.8 -2.8806 | overlap 2798118 AAAGGCGCCGACATA TCCGCCGCCTGC GGCCA GCTGGCAGCGGA CATTAAAAAGTACGG Dole_2311 2797071 - 2798186 + | radical SAM protein Dole_2312 2798196 - 2798792 + | putative adenylyl cyclase CyaB TERM 4400 2800471 - 2800461 - g 79 -6.8 -4.56775 | overlap 2800448 AGTCGGCGGTAAAAA CAGC GCC GCTG AAATTCTCGGGCTCG Dole_2313 2799019 - 2800551 + | Fis family transcriptional regulator TERM 4401 2800626 - 2800656 + F 73 -7.6 -4.07687 | opp_overlap 2800626 GAAAAAACAAAAAAA GGCCATATACGACC ATC GGTTATATATGACC TTTTCAAACAGCAAT TERM 4402 2800656 - 2800626 - f 100 -9.8 -6.28401 | opp_overlap 2800626 GAAAAAACAAAAAAA GGCCATATACGACC ATC GGTTATATATGACC TTTTCAAACAGCAAT Dole_2314 2800958 - 2801425 + | response regulator receiver protein TERM 4403 2801796 - 2801784 - g 81 -4.1 -5.08824 | overlap 2801788 CGGCCAGCCAAAAAA CTATC ACC GACAG GCGGAAGATACCGTC Dole_2315 2801764 - 2803140 + | diguanylate cyclase with PAS/PAC sensor TERM 4404 2803292 - 2803305 + F 80 -3.1 -5.43487 | TCACATGCGCCCACA GGTTA GATA TGACC TTTTTTATATAGTTT Dole_2316 2803507 - 2803686 + | CsbD family protein Dole_2317 2803700 - 2803927 + | hypothetical protein Dole_2318 2803972 - 2804193 + | hypothetical protein Dole_2319 2804289 - 2804636 + | antibiotic biosynthesis monooxygenase TERM 4405 2804939 - 2804962 + F 90 -10.4 -4.43571 | gap 1, opp_overlap 2804942, overlap 2804929 2804943 ACCGTTTGCGCGAGG GAAGTCACGCC TGC GGCGTGA-TTC TTTTGGTACTTTTCT TERM 4406 2804943 - 2804959 + F 95 -12.3 -4.29953 | opp_overlap 2804942, overlap 2804939 2804929 TTTGCGCGAGGGAAG TCACGCC TGC GGCGTGA TTCTTTTGGTACTTT Dole_2320 2805177 - 2805488 + | hypothetical protein Dole_2321 2805797 - 2805504 - | FHA domain-containing protein Dole_2322 2806344 - 2805913 - | amino acid-binding ACT domain-containing protein Dole_2323 2807681 - 2806380 - | phenylacetate--CoA ligase TERM 4407 2807774 - 2807753 - R 83 -9.4 -4.43911 | overlap 2807765 AAACCGCAAGTAAAA GGCGCTGC AACAGG GCAACGCC GCGGGACACGGGAAT TERM 4408 2807940 - 2807910 - R 78 -5.2 -4.8622 | overlap 2807913 CCTGTCAAGGAAAAA TAACGGGTTGCCCG ATG CCGGCGGCCCGTGA AAAGGGATCAGGGAT TERM 4409 2807923 - 2807913 - R 83 -8.2 -4.53777 | overlap 2807910 GTCAAGGAAAAATAA CGGG TTG CCCG ATGCCGGCGGCCCGT Dole_2324 2808972 - 2807965 - | NAD-dependent epimerase/dehydratase TERM 4410 2808105 - 2808123 + g 78 -3.8 -5.00616 | overlap 2808066 CCCCCGGCTGCATAG GCAGAAAG GTT TTTTCCGC TTTTTTGCCCAGGGC TERM 4411 2808410 - 2808397 - G 72 -5.9 -4.45696 | overlap 2808399 GGTAAATAAAAAATA GGCCA TGTC CGGCC GTCCCCAGGGGCCGT TERM 4412 2808462 - 2808439 - G 83 -4.4 -5.07567 | gap 1, overlap 2808440 2808441 GTATACGGTAAAAAA GCGCAGGCCCG TGG CGGGCAGGC-C GTAGAGATGGCTGTA TERM 4413 2808484 - 2808502 + g 79 -5.9 -4.72272 | ATGGCTGTAGGTGTG GGCCATC AGTTC GTTGGCC TTTTTGGTGGCGGCA Dole_2325 2809377 - 2809063 - | hypothetical protein TERM 4414 2809289 - 2809304 + g 77 -2.4 -5.04385 | opp_overlap 2809288 2809289, overlap 2809288 TGGTCCAGCAGAAAC GCGTAG ATTT CCGCGC TTTTTTCAAGGTATC Dole_2326 2809684 - 2809367 - | septum formation initiator Dole_2327 2811248 - 2809662 - | integral membrane protein MviN TERM 4415 2809863 - 2809836 - G 82 -6.1 -4.8622 | overlap 2809837 GGCCGGAATCAAAAA GGGGAGGGCCA GCCAGA CGGCCAGCCCC ATCAACGCCGCGCAC TERM 4416 2810461 - 2810444 - G 82 -9.1 -4.43576 | overlap 2810445 AGTAGAGATAAGAAA CGCTGCC CTCG GGCAGCA GGGTGGCCAGCAGGG TERM 4417 2811128 - 2811118 - G 95 -6.8 -5.63504 | overlap 2811119 2811120 AAGGCCACAAAAAAA GCGT CCG ACGC CATGCCGGCGCCGAG TERM 4418 2811196 - 2811182 - G 71 -7 -4.16943 | overlap 2811183 GGGCATAGCCGAAAA CCCGGC TCA GCAGGG TGGCCGAACCGATGA Dole_2328 2812875 - 2811433 - | phospholipase D/transphosphatidylase TERM 4419 2812668 - 2812691 + g 84 -2.2 -5.42259 | overlap 2812647 2812675 GCCGGGTCTCCAGGT CCTGGCGCAC CAGG GTGCGGGTGG TTTTTTTGCGCATGC Dole_2329 2813631 - 2812885 - | endonuclease/exonuclease/phosphatase Dole_2330 2814535 - 2813657 - | methylenetetrahydrofolate reductase (NAD(P)H) TERM 4420 2813944 - 2813959 + g 90 -10.4 -4.60487 | TGATGGGCACCGTGA TGCCGG CGGC CCGGCA TTTTTCCACGTAATC TERM 4421 2814046 - 2814058 + g 72 -4.9 -4.60924 | overlap 2814035 2814042 CCACTTTCAGCTTGA GATAT TCA ATATC TTTTTCAAGGCTTTC TERM 4422 2814593 - 2814559 - R 77 -8.6 -4.19238 | gap 1, overlap 2814561 CCTTCAATCGTAAAA CAGCCTGCCG-GTCC GTTTGG GAACCCGGCAGGCTC TCAAATAAACATACT TERM 4423 2814591 - 2814561 - R 81 -11.2 -3.69618 | gap 1, overlap 2814559 TTCAATCGTAAAACA GCCTGCCG-GTCC GTTTGG GAACCCGGCAGGC TCTCAAATAAACATA Dole_2331 2815278 - 2814850 - | response regulator receiver protein TERM 4424 2815306 - 2815335 + r 81 -3.5 -5.50499 | gap 1, opp_overlap 2815307 2815308, overlap 2815307 2815308 CATATCGATTTAAGA ATGCCGGACACTTT ACG ACAG-GTCCGGCGG TTTTTTTACCTATCC Dole_2332 2816009 - 2815341 - | histidine kinase A domain-containing protein Dole_2333 2816374 - 2816021 - | response regulator receiver protein Dole_2334 2818134 - 2816371 - | histidine kinase TERM 4425 2816995 - 2816985 - G 70 -4 -4.62069 | CCGTCAGTTGAAAAA TATC CTT GATA AGACCGGCCTTTTCA Dole_2335 2819407 - 2818172 - | response regulator receiver protein TERM 4426 2818879 - 2818896 + g 72 -5.5 -4.42386 | gap 1 GTACAATCAACTCGG CCGC-CTG TTC CGGAGCGG TTTTGTCCATGGGCA TERM 4427 2819006 - 2819017 + g 70 -3.6 -4.59511 | overlap 2819015 GTGTTTTCGAATCAG GGCG GCCG CGTC TTTTTCAGACATCTT Dole_2336 2821552 - 2819441 - | sulfate transporter TERM 4428 2821338 - 2821318 - G 78 -14.7 -2.65264 | TCATCAGCGATACCA CGGCCACCG GAC CGGTGGCCA GCTGCCGGCTGGAAC Dole_2337 2822328 - 2821753 - | TetR family transcriptional regulator TERM 4429 2821911 - 2821926 + g 78 -6.1 -4.59109 | overlap 2821908 CTGATCCGTCGGCCT GCCCT TCGACC AGGGC TTTTTCAAAAATGTC TERM 4430 2822377 - 2822358 - H 100 -10.8 -4.63218 | opp_overlap 2822371 TCGTTTTTAATAAAA CTGACTGA TGGA TCAGTCAG ACTGACTGTTAAGTC TERM 4431 2822379 - 2822394 + H 73 -7.6 -4.08767 | overlap 2822371 GATGGATCAGTCAGA CTGACT GTTA AGTCAG TTTTACCCGCATGGG Dole_2338 2822594 - 2823199 + | CBS domain-containing protein TERM 4432 2824038 - 2824050 + G 77 -10.5 -3.85698 | opp_overlap 2824029 CGATAACGTGCTGGT GGCCC AGC GGGCC TTTCTGGACAACGCG Dole_2339 2823196 - 2824617 + | hexapaptide repeat-containing transferase TERM 4433 2824644 - 2824676 + F 100 -10.7 -4.48987 | ATATCGCCCCTTCGA CAGGGAATGCC AAACCATAAAA GGCATTCCCTG TTTTCATTATCCGAA TERM 4434 2825276 - 2825250 - g 82 -10.2 -4.19506 | AGGGGAATTCGAAAA CTTGAAATCGCA ATT TGCGACATCAAG TTCCACTTGGGGCGG Dole_2340 2825044 - 2825601 + | hypothetical protein Dole_2341 2825704 - 2826036 + | phosphoribosylaminoimidazole carboxylase ATPase subunit Dole_2342 2826090 - 2826323 + | CopG/DNA-binding domain-containing protein Dole_2343 2826308 - 2826709 + | PilT domain-containing protein TERM 4435 2826721 - 2826754 + T 79 -9.5 -3.95324 | gap 1, opp_overlap 2826710 2826707 ATGATTCGCCAGCCG CTGGCGCAGCC-GCGT GTA GCGCAGGTTGGGCCGG TTGTTGTTCACGCTG Dole_2344 2826843 - 2826697 - | hypothetical protein TERM 4436 2826990 - 2827000 + H 71 -2.6 -5.00616 | overlap 2826989 CGGCCTGTTCAGTGT TTTT ATA AAAA TTTTTTAAAAAAACA Dole_2345 2827232 - 2827879 + | hypothetical protein TERM 4437 2829789 - 2829801 + G 78 -6.3 -4.67234 | opp_overlap 2829789 AATGATTCCAATACA GATCA AGA TGATC TTTTTAAGGTTGAAT Dole_2346 2827869 - 2830457 + | hypothetical protein TERM 4438 2830578 - 2830539 - f 79 -10.9 -3.57013 | gap 2, opp_overlap 2830548, overlap 2830535 2830562 2830563 AAAACACATAACCAA GCTAATTCAGCCGACGCAA AAAA CCGCG-CGGCTG-ATTAGC GGGCGTTCGCCGACC TERM 4439 2830572 - 2830562 - f 73 -2.4 -5.09225 | opp_overlap 2830548, overlap 2830539 2830535 2830563 AGCCGACGCAAAAAA CCGC GCG GCTG ATTAGCGGGCGTTCG Dole_2347 2830606 - 2830923 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 4440 2830960 - 2830993 + T 79 -9.5 -3.95324 | gap 1 TGCACCGGCCAGCCG CTGGCGCAGCC-GCGT GTA GCGCAGGTTGGGCCGG TTGTTGTTCACGCTG Dole_2348 2833110 - 2830942 - | RecD/TraA family helicase TERM 4441 2831256 - 2831230 - G 71 -10.8 -3.53012 | opp_overlap 2831229 2831232, overlap 2831235 CTCCCGCCCGTCAAA CAGAACGCCCAG CAC CCGGGCCTCCTG ATTGATACGGACAAT TERM 4442 2832772 - 2832784 + g 75 -5.5 -4.58685 | overlap 2832765 GATGTCGGTCTCCAG GACCT GAA GGGTC TTTTTACCGAACTTT TERM 4443 2833198 - 2833256 + r 73 -7.4 -4.30978 | opp_overlap 2833203, overlap 2833199 2833202 GCCGGTCAGACAATC -AAAAAGAGGCCCGCCGGCGCGGTTGCA ATACC TGCAAC-GCGCCAACGGGCCTCCTGGTG TTTTGATCAGTTCAG TERM 4444 2833199 - 2833254 + r 88 -12.5 -3.75571 | gap 1, opp_overlap 2833203, overlap 2833198 2833202 CCGGTCAGACAATCA AAAAGAGGCCCGCCGGCGCGGTTGCA ATACC TGCAAC-GCGCCAACGGGCCTCCTGG TGTTTTGATCAGTTC TERM 4445 2833202 - 2833251 + r 100 -18.6 -2.96321 | gap 1, opp_overlap 2833203, overlap 2833199 2833198 GTCAGACAATCAAAA AGAGGCCCGCCGGCGCGGTTGCA ATACC TGCAAC-GCGCCAACGGGCCTCC TGGTGTTTTGATCAG TERM 4446 2833250 - 2833203 - R 100 -27.2 -4.96646 | gap 1, opp_overlap 2833202 2833199 2833198 TCAGACAATCAAAAA GAGGCCCGCCGGCGCGGTTGCAA TAC CTGCAAC-GCGCCAACGGGCCTC CTGGTGTTTTGATCA TERM 4447 2833301 - 2833291 - R 70 -2.4 -4.96762 | opp_overlap 2833295 2833297 2833299 GACAGACTATAAAAA GGTG TGG CGCC GGGCCGGCTTTTTGC TERM 4448 2833297 - 2833328 + r 85 -5.7 -5.02476 | gap 1, opp_overlap 2833291, overlap 2833295 2833299 CTATAAAAAGGTGTG GCGCCGGGC-CGGC TTTTT GCCGTGGCTGCCGC TTTTTTCAAAAGTCT TERM 4449 2833299 - 2833309 + r 83 -8.2 -4.62783 | opp_overlap 2833291, overlap 2833295 2833297 ATAAAAAGGTGTGGC GCCG GGC CGGC TTTTTGCCGTGGCTG Dole_2349 2834559 - 2833282 - | DEAD/DEAH box helicase domain-containing protein TERM 4450 2834619 - 2834599 - R 100 -14 -5.80817 | opp_overlap 2834587 2834599 CCTAATATAAAAAAA GCCCCGGA GTCAT TCCGGGGC TTATGTAATGTCTTT TERM 4451 2834599 - 2834619 + r 93 -14.7 -3.60782 | opp_overlap 2834599, overlap 2834587 CCTAATATAAAAAAA GCCCCGGAG TCA TTCCGGGGC TTATGTAATGTCTTT TERM 4452 2834823 - 2834837 + r 73 -7.2 -4.29304 | TTGTCTTTACGGCGT TACTCT CAA AGAGTA TTTCTCTTATCCTGC Dole_2350 2835812 - 2835249 - | hypothetical protein Dole_2351 2836032 - 2836793 + | histidine biosynthesis protein TERM 4453 2836952 - 2836936 - g 95 -10.8 -4.83615 | opp_overlap 2836935 2836934 2836944 GATCGTGGACAAAAA CCCCGC ACCCG GCGGGG CCTGTTCCTGCTACG TERM 4454 2837724 - 2837699 - g 93 -11.1 -4.5187 | overlap 2837701 GTTAAAAAAATCAAA CAGGCCTGGAC CGCG GTCCAGGCCAA GATAGCGGTCAAAAA TERM 4455 2837722 - 2837701 - g 100 -15.9 -3.84105 | overlap 2837699 TAAAAAAATCAAACA GGCCTGGAC CGCG GTCCAGGCC AAGATAGCGGTCAAA Dole_2352 2836808 - 2838295 + | FAD dependent oxidoreductase Dole_2353 2838958 - 2838320 - | hypothetical protein Dole_2354 2839498 - 2838995 - | hypothetical protein TERM 4456 2839370 - 2839427 + g 79 -13.4 -3.05596 | gap 1, opp_overlap 2839401, overlap 2839372 AAGGGCCGATGCAAT GGCCGTGG-CCTCCAGCAGGCCGATCC AGATA GGAATGGTCTCCTGGGTGTCCACGGTC TTGAGTACCAGAATC TERM 4457 2839372 - 2839425 + g 73 -12.4 -3.08679 | gap 1, opp_overlap 2839401, overlap 2839370 GGGCCGATGCAATGG CCGTGG-CCTCCAGCAGGCCGATCC AGATA GGAATGGTCTCCTGGGTGTCCACGG TCTTGAGTACCAGAA Dole_2355 2840888 - 2839488 - | RNA modification protein TERM 4458 2839748 - 2839767 + g 85 -3.4 -5.41143 | overlap 2839751 CCAGCACCTGTTCGA CACGGCCC TCCA GCGCCCTG TTTTTTTCAGCGGTG Dole_2356 2841325 - 2840906 - | hypothetical protein TERM 4459 2841168 - 2841146 - G 89 -2.6 -5.75342 | overlap 2841167 CTTGCCGAAAAAAAA GGTGCTCCCA TCG CAGGAAAACC GGTTCAGCACAATGG TERM 4460 2841366 - 2841356 - R 71 -4.6 -4.50193 | ACGAATGAACCAAAA CCAG CAT CCGG ACTAATAAGGAAGCT Dole_2357 2841616 - 2841368 - | hypothetical protein Dole_2358 2842225 - 2841662 - | translation elongation factor P TERM 4461 2841755 - 2841776 + g 75 -10.1 -3.71848 | opp_overlap 2841734 CACCTGGAGTACGCA GCCGGTTTC CACG GTAACCGGC TTGTTGCTGCCCGAG Dole_2359 2843091 - 2842309 - | N-(5'phosphoribosyl)anthranilate isomerase (PRAI) TERM 4462 2842428 - 2842408 - G 74 -6.8 -4.3739 | gap 1, opp_overlap 2842421 2842426, overlap 2842378 CATGTCCTTAGAAAA CCGCACCGG GTTG CCGGC-CGG ATCGCGCCGGTTGGT TERM 4463 2842628 - 2842603 - G 100 -14.7 -3.87815 | GGTGATGCCCACAAA CCCGGGAACCG GGGC CGCTTCCCGGG CCGTGGGGGAGGTGT Dole_2360 2845136 - 2843103 - | hypothetical protein TERM 4464 2843216 - 2843250 + g 78 -9.3 -4.07568 | CGGGACTGTACCACC GGGC-CTGGTAGACGGC CAT GCCGTC-ACCGGTGGCC TTTTCAAGGGCCACG TERM 4465 2844668 - 2844690 + g 73 -11.3 -3.33737 | opp_overlap 2844655 2844667 2844666, overlap 2844656 GCTGCGGATCAAACC CGCTCTTGC CGCCT GCAAGGGCG TTATAAAAATTGCTG Dole_2361 2845932 - 2845120 - | FkbM family methyltransferase TERM 4466 2845368 - 2845393 + g 75 -5.3 -4.57073 | CGACAATCATGGACA GGTGGTCCCGG TTGG CCTGAATCACC TTTTTCAACCCGGTG Dole_2362 2846026 - 2846976 + | hypothetical protein Dole_2363 2847763 - 2847020 - | lipid-binding START domain-containing protein TERM 4467 2847370 - 2847380 + g 84 -4 -5.26119 | opp_overlap 2847370 ACTGGTAATCAATAA CAAA CCG TTTG TTTTCTTTTTCAAAG TERM 4468 2847880 - 2847902 + H 89 -6.2 -5.19879 | overlap 2847882 GCCCTGTCCAATTTT TTCGAAGGCG TAC CGCTTTCGTG TTTTTCTCTTTACAG TERM 4469 2847882 - 2847900 + H 87 -11 -4.22132 | overlap 2847880 CCTGTCCAATTTTTT CGAAGGCG TAC CGCTTTCG TGTTTTTCTCTTTAC TERM 4470 2847998 - 2848046 + G 81 -3.9 -5.14563 | gap 1 CTGCTGTTTTTGACC TGGTT-GTCATCGGGTTCGCCA TCTATC TGCTGACCCTGGTGGCCAACCA TTTTTTCATGACCAG TERM 4471 2848993 - 2848978 - g 78 -6.1 -4.63932 | opp_overlap 2848988 CAGCTGGGAAGAAAA GCAGG TATTAC CCTGC TGATGATTTACGCGG Dole_2364 2847979 - 2849040 + | CaCA family Na(+)/Ca(+) antiporter TERM 4472 2849147 - 2849174 + T 100 -15 -4.76312 | gap 1, opp_overlap 2849147 AACCAACAAAAAAAA CCGGTTTGCCCTC TTT GAGG-CAAACCGG TTTTTGCGTATTATC TERM 4473 2849174 - 2849147 - T 100 -15 -6.15536 | gap 1, opp_overlap 2849147 AACCAACAAAAAAAA CCGGTTTGCCCTC TTT GAGG-CAAACCGG TTTTTGCGTATTATC Dole_2365 2849977 - 2849207 - | enoyl-CoA hydratase/isomerase Dole_2366 2851880 - 2850075 - | acyl-CoA dehydrogenase domain-containing protein TERM 4474 2850366 - 2850383 + g 78 -8.3 -4.41348 | overlap 2850368 GGTCTTGCCCAGGTG CCGGGCG GCCT CGCCCAG TTTGTTTAAGGACGC Dole_2367 2852543 - 2851935 - | TetR family transcriptional regulator TERM 4475 2852320 - 2852336 + g 70 -2.2 -4.76193 | overlap 2852322 TCCACTTCATGCCGG AAGGTG CCGAA CACCTC TTTTGTCTTGTAATT Dole_2368 2853748 - 2852753 - | nuclease Dole_2369 2854726 - 2853845 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 4476 2854297 - 2854276 - G 75 -5.7 -4.62471 | overlap 2854277 TGGAAGGCGTAAAAA TCGGTTCGG GCAG CCGGTCCGA CTCCCGCAAGCCGTC Dole_2370 2855119 - 2854754 - | type IV pilus assembly PilZ Dole_2371 2856299 - 2855136 - | cyclic nucleotide-binding protein TERM 4477 2856116 - 2856096 - G 83 -4.7 -5.08824 | CTTCCAGCCAAAAAA GGAGTAAAG AAC CTTCAATCC ACGCTCCATGCCGTT Dole_2372 2856933 - 2856319 - | gliding motility protein (MglA) Dole_2373 2857936 - 2857055 - | hypothetical protein TERM 4478 2857937 - 2857949 + H 75 -5.5 -4.77567 | GATCTTCTCCCGCAT GGTTG AAG CAGCC TTTTATTGTCCGGGT TERM 4479 2858211 - 2858229 + H 74 -6.8 -4.36914 | opp_overlap 2858193 2858191, overlap 2858191 2858190 ACTGTTATGAACGGT TTGAGGTA TTT TATCTCAA TTTTATGCCGAAAAA TERM 4480 2858271 - 2858289 + H 72 -10.2 -3.06815 | GGGCGAGTCACCTTG ATCCCGCC ATC GGCGGGAC TGTGTTGCGGGACAT TERM 4481 2859240 - 2859230 - g 83 -5.4 -4.98255 | TCTCAAGGACAAAAA GAAG ATT CTTC CCTGCGCGGTGCGGC Dole_2374 2858496 - 2859431 + | malate dehydrogenase, NAD-dependent TERM 4482 2859488 - 2859461 - T 93 -12.6 -3.88442 | opp_overlap 2859461, overlap 2859451 TAAAACATCATCAAA CGCGCATTCCGG TGTA CCGGGGTGCGCG TTTTTTTTCGCAAGC TERM 4483 2859461 - 2859488 + T 100 -17 -5.75342 | opp_overlap 2859461 2859451 TAAAACATCATCAAA CGCGCATTCCGG TGTA CCGGGGTGCGCG TTTTTTTTCGCAAGC Dole_2375 2861530 - 2859650 - | excinuclease ABC, C subunit TERM 4484 2860473 - 2860451 - G 71 -7.7 -3.99324 | opp_overlap 2860464 CTTTATCAGCAGAAA CTTTTCCCC TCTTC GGGGAACAG CCATGTTCACCCGTT TERM 4485 2860464 - 2860486 + g 86 -8.5 -4.57073 | gap 1, opp_overlap 2860451 AACTTTTCCCCTCTT CGGG-GAACA GCCA TGTTCACCCG TTTTTCCGCCAGGTC TERM 4486 2860662 - 2860652 - G 91 -8.2 -5.15969 | opp_overlap 2860653, overlap 2860653 2860654 CTCGAAGTGAAAAAA CCGG GTG CCGG AAAGCACCCCCTTTC TERM 4487 2860819 - 2860798 - G 70 -4.3 -4.66833 | gap 1, opp_overlap 2860800 2860807, overlap 2860799 2860800 TTTCAATGGCAAAAA GCCGGTCCCG CAG CAGGGCCG-C TTTTTCAAATTCCTG TERM 4488 2860807 - 2860819 + g 72 -4.7 -4.67904 | opp_overlap 2860800 2860798 2860799, overlap 2860800 CAAAAAGCCGGTCCC GCAGC AGG GCCGC TTTTTCAAATTCCTG TERM 4489 2860997 - 2861007 + g 84 -2.4 -5.41746 | opp_overlap 2860997 CTGGAAGTTAATGCA GGGC CGC GACC TTTTTTTAAAAACTT TERM 4490 2861119 - 2861099 - G 88 -11.1 -4.25104 | opp_overlap 2861117, overlap 2861113 CCGGGCCGATGAAAA GGGGCCG AAGTAAA CGGCCCC GTCGGGCCGGGTCTT TERM 4491 2861128 - 2861113 - G 83 -11.8 -3.90291 | opp_overlap 2861117, overlap 2861099 AGGGGCCGAAGTAAA CGGCCC CGTC GGGCCG GGTCTTGCGCACGAT TERM 4492 2861448 - 2861467 + g 95 -10.6 -4.82901 | opp_overlap 2861441 2861440, overlap 2861450 AGATAAACCCCGGGC CGGGCCGG TGCA CCGGCCAG TTTTTCTGCCAACCG TERM 4493 2861597 - 2861655 + r 79 -11.7 -3.24032 | gap 2, overlap 2861601 AATCGTACCACCCTA CCA-GCCCG-AATTCCGGGTCTGGCCCGG GTT CCGGGGCAGGCCCAGAATGACGGATGTGG TGTTGCTTAGCCCGT TERM 4494 2861601 - 2861650 + r 86 -13.5 -2.94806 | gap 1, overlap 2861597 GTACCACCCTACCAG CCCG-AATTCCGGGTCTGGCCCGG GTT CCGGGGCAGGCCCAGAATGACGGA TGTGGTGTTGCTTAG Dole_2376 2863743 - 2861743 - | excinuclease ABC subunit B TERM 4495 2862456 - 2862442 - G 71 -10 -3.55622 | opp_overlap 2862441 2862442 2862444 CCGAATCTCGTCAAA CAGGTG ATC CACCTG GTTTTCCGCGCTTCG Dole_2377 2864923 - 2863799 - | hypothetical protein TERM 4496 2864024 - 2864039 + g 73 -11.8 -3.16564 | GGCGCCGCCGGCGCC GGCGGC CATG GCCGCC TTCATCAGGTCCGGC TERM 4497 2864816 - 2864873 + g 75 -4.1 -4.84359 | gap 1, opp_overlap 2864825 2864833, overlap 2864818 AGACCGGGCCGCATA CAT-GTAAAAGTCAAGAACACCGGCATC TTT GATACCGGCGGTCACGTCTTTTGCGATG TTTTTATGGACGTGA TERM 4498 2864863 - 2864825 - G 77 -8 -4.26188 | opp_overlap 2864818 2864816, overlap 2864833 CGCATACATGTAAAA GTCAAGAACACCGGCATC TTT GATACCGGCGGTCACGTC TTTTGCGATGTTTTT TERM 4499 2864855 - 2864833 - G 83 -12 -3.81879 | opp_overlap 2864818 2864816, overlap 2864825 TGTAAAAGTCAAGAA CACCGGCATC TTT GATACCGGCG GTCACGTCTTTTGCG Dole_2378 2866874 - 2864934 - | hypothetical protein Dole_2379 2867073 - 2867480 + | hypothetical protein Dole_2380 2868734 - 2867502 - | diguanylate cyclase TERM 4500 2868786 - 2868772 - R 73 -7 -4.25056 | opp_overlap 2868779, overlap 2868773 CACCGCATGAATAAA GCAGCC ACC GGCGGC AGCCGGTTATCATGG TERM 4501 2868779 - 2868792 + r 73 -9.5 -3.41602 | opp_overlap 2868772 2868773 TGAATAAAGCAGCCA CCGGC GGCA GCCGG TTATCATGGAGTGGG Dole_2381 2870727 - 2868796 - | Na/Pi-cotransporter II-related protein TERM 4502 2869574 - 2869518 - G 75 -8.6 -4.0911 | opp_overlap 2869534 TAAAAGGAATAATAA TGGCCCGAAGCATACGCTCCAGCA GCTTGGCCA TGCGGGAGAGTTCGGTGCGGGCCA GGCTGATGGCGATTT TERM 4503 2870681 - 2870664 - G 75 -4.1 -4.75356 | gap 1 AAAGACACGCAAAAA CAGCGGCC GCA AGCC-CTG CCAGGACAGGCCTGC Dole_2382 2872675 - 2870747 - | hypothetical protein TERM 4504 2870981 - 2870941 - G 71 -11.8 -2.91593 | gap 1, overlap 2870940 2870968 2870971 GACTCTTCCAGAAAG GGGCCACGGTCCTGACCAT GCCC AAAGCCAGGCCCG-GGCCC AGGGCATAACTCTCA TERM 4505 2871403 - 2871445 + g 74 -7.7 -4.22214 | gap 2, overlap 2871400 2871405 TGAGCCGGTTGGCGG CATGGCCGGTTTCCGG--CCG GGG CGGTACCGGAATCCCGCCATC TTCTTTTGAATCCAT TERM 4506 2871405 - 2871443 + g 75 -10.3 -3.70622 | gap 2, overlap 2871400 2871403 AGCCGGTTGGCGGCA TGGCCGGTTTCCGG--CCG GGG CGGTACCGGAATCCCGCCA TCTTCTTTTGAATCC TERM 4507 2872453 - 2872436 - G 84 -2.5 -5.36441 | opp_overlap 2872436, overlap 2872438 CGGCGACAGAAAAAA CCGGGGG TCAT CCACCTG GCTTTCGAATCCGAA TERM 4508 2872601 - 2872589 - G 74 -6.9 -4.30719 | overlap 2872590 GGCGGGGACAATAAA CGCCG GTC CGGCA GCCAGCACAAAGAAA TERM 4509 2872654 - 2872613 - G 75 -8.9 -3.97947 | opp_overlap 2872618, overlap 2872618 GGCAGCCAGCACAAA GAAAAGGGATACATGGC AAAGAAAA ACCATGTACCCCTTTTT TGCTTTTTTAAAATC TERM 4510 2872649 - 2872618 - G 100 -8.8 -5.02323 | opp_overlap 2872618, overlap 2872613 CCAGCACAAAGAAAA GGGATACATGGC AAAGAAAA ACCATGTACCCC TTTTTTGCTTTTTTA TERM 4511 2872618 - 2872649 + g 93 -5.9 -5.59502 | opp_overlap 2872618 2872613 CCAGCACAAAGAAAA GGGATACATGG CAAAGAAAAA CCATGTACCCC TTTTTTGCTTTTTTA Dole_2383 2873176 - 2872703 - | hypothetical protein TERM 4512 2874887 - 2874902 + G 86 -9 -4.56597 | opp_overlap 2874887 2874890 2874891 TTGCTGACGCAAAAA TCAGCG GCAC CGCTGA TTTTTCAACAGCAGC TERM 4513 2874902 - 2874887 - g 86 -9 -4.65895 | opp_overlap 2874887, overlap 2874890 2874891 TTGCTGACGCAAAAA TCAGCG GCAC CGCTGA TTTTTCAACAGCAGC TERM 4514 2875267 - 2875288 + G 79 -7.2 -4.56597 | opp_overlap 2875266 2875265 GTCCACCGAAACACG GCCCCGGA CATCGA TCCAGGGC TTTTTGCCCCGGAGG TERM 4515 2875380 - 2875366 - g 71 -7.8 -3.96148 | opp_overlap 2875365 2875368, overlap 2875373 TCTCTCCATGACAAA GAGACC ACC GGCCTC CTTCACTGCCGGCTT TERM 4516 2875386 - 2875406 + G 74 -8.2 -4.14739 | opp_overlap 2875373 CACCGGCCTCCTTCA CTGCCGGC TTGAC GCGGGCAG TTTTCGAATGCCTGA TERM 4517 2875494 - 2875507 + G 71 -8.1 -4.07568 | GTTCAAGAGTAGCCC CGACC AGAA GGTCG TTTTCAGGGAGGCCG TERM 4518 2875574 - 2875587 + G 74 -8.1 -4.15044 | ACCTTCAACTGGAAT CAGGG CCGA CCCTG TTTATTGAAAAAAGC Dole_2384 2873566 - 2876187 + | hypothetical protein TERM 4519 2876228 - 2876214 - g 89 -2.1 -5.67063 | opp_overlap 2876227 GGCATGAGAAAAAAA CAGAT CATCT ACCTG TGGGCAGCCGCGTTC Dole_2385 2876169 - 2876402 + | hypothetical protein Dole_2386 2876441 - 2876818 + | hypothetical protein Dole_2387 2878380 - 2876992 - | hypothetical protein TERM 4520 2877670 - 2877648 - G 76 -3.2 -4.91109 | opp_overlap 2877663, overlap 2877656 2877660 GGGTGACGATAAAAA CGCCAAAAGC CAC GCCGGCGGCG TACCACTGTTTTCGA TERM 4521 2877674 - 2877656 - G 72 -6.6 -4.32233 | opp_overlap 2877663, overlap 2877648 2877660 ATAAAAACGCCAAAA GCCACGCC GGC GGCGTACC ACTGTTTTCGAATCA TERM 4522 2877911 - 2877877 - G 71 -10 -3.61774 | gap 1 CAGAAGAGTGGTAAA GGCGACGCGGACCAG GGAAGG CCG-TCCGCCTCGCC ACCAGTGCAGTACGA Dole_2388 2879782 - 2878373 - | hypothetical protein TERM 4523 2879071 - 2879092 + g 74 -2.1 -5.00616 | gap 1, opp_overlap 2879063 2879072, overlap 2879072 CAATCAACACCGCAA AGGCGGTGCC GAC GAC-CCGCCA TTTTTTGCGCAGCAG TERM 4524 2879827 - 2879797 - H 81 -12.6 -2.57132 | overlap 2879796 TCCTCCCCTTACAAT GGATCGGCGCAG GCCTCCG CTGTGCCGATCC GCTGCTGCCATTCAA TERM 4525 2880496 - 2880480 - g 74 -11.5 -3.58343 | overlap 2880493 TGGACCATCTGGAAA CCGGCGC AAG GCACCGG GCCATGGCCGGCATG Dole_2389 2880113 - 2880775 + | methyltransferase type 11 Dole_2390 2880779 - 2880961 + | hypothetical protein TERM 4526 2881323 - 2881337 + G 81 -3.5 -5.24531 | gap 1, opp_overlap 2881321, overlap 2881321 GGATGCCCCAAAAGG CGAGGC CCTG GCC-CG TTTTTTATGCGGCCT TERM 4527 2881839 - 2881825 - g 76 -2.8 -5.00616 | TGGCTGCGCAAAAAA GACCAC GAA ATGATC GAACTGGAAATCGTC Dole_2391 2880958 - 2881923 + | hypothetical protein Dole_2392 2883539 - 2882031 - | histidine kinase TERM 4528 2883581 - 2883603 + r 71 -7 -4.00512 | gap 1 AGGCCGTGTTCAAGT CGGTCC-CG GCGGCA CGTGGACCG TATTTTATTCTACAC TERM 4529 2883629 - 2883640 + r 93 -7.2 -5.44119 | overlap 2883625 TACACCCGAACCGGT GCGG CGTC CCGC TTTTTTTCCGCTACG Dole_2393 2886129 - 2883670 - | pyruvate, water dikinase TERM 4530 2885786 - 2885729 - G 95 -13.5 -4.17048 | gap 3 TGCTCCGGAAAATAA CGG--GCCAATTGGGC-CAGGCCGGCGG CCTTC CCGCCGACCAGCGCCGAATCGGCGGCCG CGGGGTCGGCCAAGC Dole_2394 2886545 - 2886165 - | response regulator receiver protein Dole_2395 2887548 - 2886577 - | hypothetical protein TERM 4531 2887589 - 2887570 - R 71 -9.2 -3.53091 | ACCTCCTTGCGTAAA CCGGCACC GGCC AGCGCCGG CGGGGATCTATTGGT Dole_2396 2888016 - 2887597 - | response regulator receiver protein Dole_2397 2888921 - 2888109 - | hypothetical protein Dole_2398 2889771 - 2888956 - | response regulator receiver protein TERM 4532 2889155 - 2889193 + g 74 -2.2 -4.91712 | gap 1, overlap 2889156 2889156 2889188 ACCAGGGCCGCCTTG AC-CCGGCAGGCCACGG CCATGT CCGATACCTGCCGGCGG TTTTTCTCCGTTGCC Dole_2399 2891625 - 2889799 - | TrkA domain-containing protein TERM 4533 2890160 - 2890172 + g 83 -4.7 -5.08824 | overlap 2890159 2890161 GTGTGGGCGATCCAG GCGGC GGT GCCGG TTTTTTCCGTGGCAA TERM 4534 2890909 - 2890872 - G 93 -9.2 -4.82901 | gap 1, opp_overlap 2890871, overlap 2890898 TGTCCTCCACAAAAA GCGGATCCCGG-TAATC GGTAA AATCATCCGGGGTCCGC AGTTCATAAAATTCG TERM 4535 2891581 - 2891571 - G 80 -2.4 -5.24799 | overlap 2891573 CGATAAACAGAAAAA CCGC CAG GCCG ATCATGGCCATCACC TERM 4536 2891654 - 2891670 + r 100 -13.7 -4.40882 | overlap 2891651 CCGGTTGGTCTTTCC CGGGCGA CTG TCGCCCG TTCTTTTCATTTGTA Dole_2400 2892134 - 2891688 - | hypothetical protein TERM 4537 2891930 - 2891917 - G 78 -6.7 -4.63218 | overlap 2891919 2891924 CCTGCCTGAATAAAA GACTG AAGG CAGTC AGACAGAACCCTGCC Dole_2401 2893698 - 2892349 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 4538 2893130 - 2893118 - G 72 -5.5 -4.44974 | overlap 2893109 2893108 2893119 2893120 TTAAAGGCCAGAAAA GGTCC GGC AGACC GGCGGCTGGCCGCGT TERM 4539 2893725 - 2893759 + r 70 -9.9 -3.1855 | gap 1 TGTTTGCGTCGCCAA GGGGGAGAG-GGGCGG CAAG CCTCCTGCTCGCCCCC TTGCATGTTCGGCCC Dole_2402 2894152 - 2893793 - | hypothetical protein TERM 4540 2894151 - 2894171 + g 77 -8.3 -4.27316 | overlap 2894152 GCGGTAATCAGTTCC ATGCGATGA GCC TCATCGCAG TTTTCAATTCAGCGC TERM 4541 2894152 - 2894170 + g 73 -11.8 -3.16068 | overlap 2894151 CGGTAATCAGTTCCA TGCGATGA GCC TCATCGCA GTTTTCAATTCAGCG Dole_2403 2894470 - 2894180 - | GntR family transcriptional regulator TERM 4542 2895775 - 2895758 - g 74 -7.7 -4.15106 | TATGAACGGGCAAAA GGCATTC TGCA GAACGCC GGAGCTAAAGGGGTG Dole_2404 2894699 - 2896000 + | glucose-methanol-choline oxidoreductase TERM 4543 2896053 - 2896025 - T 100 -17.5 -5.03314 | opp_overlap 2896025 CTGACCTTGAAAAAA TAAGGGCGCCGCA TAC TGCCGCGCCCTTA TTTTTTGGGTTTTGC TERM 4544 2896025 - 2896053 + T 100 -17.5 -5.2696 | opp_overlap 2896025 CTGACCTTGAAAAAA TAAGGGCGCCGCA TAC TGCCGCGCCCTTA TTTTTTGGGTTTTGC Dole_2405 2896797 - 2896051 - | glycosyl transferase family protein TERM 4545 2896540 - 2896576 + g 70 -3.6 -4.63218 | gap 2, opp_overlap 2896499, overlap 2896530 2896543 2896545 GCCGGTGGCCGCGGC CATTCCCTGGCGCAGGGC AAG GCCCA-CGCC-GGGATTC TTTTGTTGAACCAGA TERM 4546 2896543 - 2896573 + g 85 -9.7 -4.43307 | gap 2, overlap 2896540 2896545 GGTGGCCGCGGCCAT TCCCTGGCGCAGGGC AAG GCCCA-CGCC-GGGA TTCTTTTGTTGAACC TERM 4547 2896545 - 2896572 + g 71 -11.2 -3.25261 | gap 1, overlap 2896543 2896540 TGGCCGCGGCCATTC CCTGGCGCAGGGC AAG GCCCA-CGCCGGG ATTCTTTTGTTGAAC TERM 4548 2896913 - 2896929 + H 73 -5.1 -4.52589 | overlap 2896914 TATCATGAACAACTT GTGGCAT TTT ATGCCAA TTTTATGTCGAAAAA TERM 4549 2896962 - 2896946 - H 77 -4.3 -5.03314 | opp_overlap 2896957, overlap 2896947 TTTATGTCGAAAAAA TTCACCC TTC GGGCGAG TCACCTTGGTCCCGC TERM 4550 2896971 - 2896989 + H 100 -16 -3.06815 | GGGCGAGTCACCTTG GTCCCGCC ATC GGCGGGAC TGTGTTGCGGAGCAT TERM 4551 2897477 - 2897491 + G 76 -3.4 -5.00884 | opp_overlap 2897477 GGTCAACAATGAAAC CCGGCG CAA CATCGG TTTTTTAAAGGCCCT Dole_2406 2897208 - 2898344 + | hypothetical protein Dole_2407 2899773 - 2898358 - | radical SAM domain-containing protein TERM 4552 2899490 - 2899513 + g 93 -9.5 -4.79223 | opp_overlap 2899490 2899489, overlap 2899508 CCCAGCAGGAGCAAC GCCTCGGGC AACAGG GCCCGAAGC TTTTTCGTAATATAG TERM 4553 2899885 - 2899900 + r 100 -9 -4.72007 | GACGCATGACCATCC GCGCTA TGTA TAGCGC TTTCTTTTGGTGCGG Dole_2408 2901468 - 2899888 - | hypothetical protein TERM 4554 2899944 - 2899928 - G 81 -3 -5.33405 | gap 1, overlap 2899932 CGGATCAAATAAAAA GTGA-GG AGCC CCGTCAC CAGGGCCAGGGCCAT TERM 4555 2900240 - 2900222 - G 72 -4.5 -4.56775 | ACCGGTCGCCAAAAA CCGGG CGGACGGTC CCCGG CGAAAAAATCGGCCA TERM 4556 2900494 - 2900469 - G 75 -5.4 -4.60073 | overlap 2900470 GACAGAACCAGAAAA CCCCCTTGCC CGGACT GGCAAGAAGA CCGGCCAGCCCTTCC TERM 4557 2900665 - 2900684 + g 75 -8.6 -4.09685 | opp_overlap 2900680 CCGCGCACAGATCCA CCGGTTTT CCCA AAAGCCGG TTTTCGACCGTGCCC Dole_2409 2902205 - 2901477 - | peptidylprolyl isomerase FKBP-type TERM 4558 2901774 - 2901785 + g 74 -7.2 -4.37092 | overlap 2901768 GACAGCCTCGGGCCG GGGG CCGT CCCC TTTTCTCAACACCGT TERM 4559 2902100 - 2902114 + g 75 -5.8 -4.58663 | TATAACTGAACTGTT TTGATA TGT TATCAA TTTTTGCCGCCTGCT TERM 4560 2902961 - 2902949 - g 72 -4.7 -4.58395 | GGTATGGTGGAAAAA CCCTC AGG GGGGG GGCAGAAAAGCAGTG TERM 4561 2903053 - 2903041 - g 83 -4.7 -5.1101 | overlap 2903042 2903045 TCATCATGGAAAAAA GCCAC GTA GGGGC CTACGGGATGGAATG Dole_2410 2902320 - 2904266 + | TPR repeat-containing protein TERM 4562 2904657 - 2904685 + G 100 -3.1 -5.90981 | gap 2, overlap 2904661 TTATTCTCTATTCTT CAGAGGCGCGGGG ATACG CGCCG-GCC-CTG TTTTTTTTGGTATCC Dole_2411 2904263 - 2905792 + | hypothetical protein Dole_2412 2905789 - 2906478 + | glycosyl transferase family protein TERM 4563 2906574 - 2906595 + T 80 -4.3 -5.252 | overlap 2906576 TTCGCCGGACGATTC CATGACACG AAGC CGTGCCAGG TTTTTTCTGGCGGTC Dole_2413 2908337 - 2906556 - | TPR repeat-containing protein TERM 4564 2906860 - 2906876 + g 78 -9.3 -4.09685 | TGATAGGCGGCCAGC GCGGCCG ACA CGGCCCC TTTTCGCGCATGGGC TERM 4565 2906925 - 2906912 - G 72 -9.5 -3.6715 | CCAGGCAATGGTAAA GGCGG GGGT CCGCC GGTGAATGCGCAAGG TERM 4566 2907027 - 2907037 + g 71 -8.2 -4.0896 | opp_overlap 2907017, overlap 2907024 AACATCTTCCGCCGG GCGG TGG CCGC TTTTGAGAAGACTTT TERM 4567 2907391 - 2907377 - G 86 -3.4 -5.49579 | opp_overlap 2907378, overlap 2907378 TCAGAAAAAATAAAA CCGCTG CGC CCGCGA TTTCCCATGCCCCCG TERM 4568 2907958 - 2907941 - G 80 -9.8 -4.15106 | opp_overlap 2907941, overlap 2907932 GATGAACGGCGAAAA GCGCCG CCAGGC CGGCGC TTTTCCATGTATCGC TERM 4569 2907941 - 2907958 + g 83 -9.8 -4.26188 | opp_overlap 2907932 2907941 GATGAACGGCGAAAA GCGCCG CCAGGC CGGCGC TTTTCCATGTATCGC Dole_2414 2910103 - 2908334 - | TPR repeat-containing protein TERM 4570 2908662 - 2908687 + g 77 -11.7 -3.53012 | opp_overlap 2908659 GCCTGCCGGAAACCG GCGGCGGCCCG CTGG CGGTCCCCCGC TTTCAAAAACGCCGC TERM 4571 2909027 - 2909014 - G 100 -9.5 -4.91109 | CGGCCATGATAAAAA GCCCG ATGG CGGGC AGATAGGTATGCCGG TERM 4572 2909633 - 2909620 - G 87 -3.8 -5.42259 | overlap 2909622 2909623 GCAGGCCGAAAAAAA CAGC CAGAAC GCTG TTCCGGGTCGCCAGC TERM 4573 2909705 - 2909687 - G 74 -7.4 -4.27316 | overlap 2909692 CGGGTGAATGGAAAA CAGCATCG CCG CGATACCG GCCGGAAACGACCGG TERM 4574 2909762 - 2909747 - G 72 -6.1 -4.31293 | GGACAGAGCAAGAAA CAGCG TGATGC CGCTG AGAACATGAAACAGC Dole_2415 2912293 - 2910233 - | TPR repeat-containing protein TERM 4575 2911155 - 2911144 - G 71 -7.2 -4.2535 | ACATTACACCCAAAA CCGC CACG GCGG ACGCTGCCAGGCCCC TERM 4576 2911555 - 2911540 - G 76 -4.6 -4.8543 | GAATCCGCAGAAAAA CCGGCA GTTC CGCCAG GGAGGTTATGGCGCC Dole_2416 2913707 - 2912298 - | radical SAM domain-containing protein TERM 4577 2912440 - 2912395 - G 91 -7.5 -5.30616 | opp_overlap 2912398 2912402, overlap 2912397 2912398 GGATGCAAATAAAAA TAGGCATTGGCCGCCTTTTTG TACA CAAAAAGGCGGGCGTTGCTGA TCTGGTCGTCGCTCA TERM 4578 2912438 - 2912397 - G 85 -10.1 -4.2793 | opp_overlap 2912398 2912402, overlap 2912395 2912398 ATGCAAATAAAAATA GGCATTGGCCGCCTTTTTG TACA CAAAAAGGCGGGCGTTGCT GATCTGGTCGTCGCT TERM 4579 2912437 - 2912398 - G 79 -13.6 -3.15131 | opp_overlap 2912398 2912402, overlap 2912397 2912395 TGCAAATAAAAATAG GCATTGGCCGCCTTTTTG TACA CAAAAAGGCGGGCGTTGC TGATCTGGTCGTCGC TERM 4580 2912398 - 2912437 + g 84 -15.8 -2.67515 | opp_overlap 2912397 2912395 2912398, overlap 2912402 TGCAAATAAAAATAG GCATTGGCCGCCTTTTTG TACA CAAAAAGGCGGGCGTTGC TGATCTGGTCGTCGC TERM 4581 2912402 - 2912433 + g 82 -13.8 -3.25719 | opp_overlap 2912398 2912397 2912395, overlap 2912398 AATAAAAATAGGCAT TGGCCGCCTTTTTG TACA CAAAAAGGCGGGCG TTGCTGATCTGGTCG TERM 4582 2912498 - 2912517 + g 75 -9.2 -3.80877 | overlap 2912497 TGTACAGCCGGAATC GGGACGGC AGGC GCCATCCC TGTTTTATCACGTGA TERM 4583 2913233 - 2913219 - G 71 -7 -4.15788 | opp_overlap 2913220, overlap 2913220 AATCTCCTCAATAAA GCCCCG TTC CGGGGT TTTATAAAGCGTGCC TERM 4584 2913220 - 2913232 + g 85 -10.5 -4.37886 | opp_overlap 2913220 2913219 ATCTCCTCAATAAAG CCCCG TTC CGGGG TTTTATAAAGCGTGC TERM 4585 2913420 - 2913434 + g 90 -7.1 -5.03314 | overlap 2913405 2913403 GGGCCCGCCGGCAAT CACGG CAGCC CCGTG TTTTTTGGCGATGGC TERM 4586 2914686 - 2914668 - g 82 -8.8 -4.42386 | opp_overlap 2914681 TGGCCATGTATAAAA CCCAGGAC TTT ACCCTGGG CCAACGGCTTTTAAC TERM 4587 2914990 - 2915023 + G 85 -15.4 -3.06696 | overlap 2914995 CCTGCCCTCTGTCCT TGTAATCGCGGCCC TGGCCT GGGCCGCCATTACA TATATTCGGCCCCGG TERM 4588 2915671 - 2915651 - g 76 -3.1 -5.00616 | overlap 2915653 TCGTTCTTTAAAAAA GCCCTGACC GCG GATCCGGCC TATGCCGGCGCGGCC Dole_2417 2913887 - 2916175 + | TPR repeat-containing protein TERM 4589 2916550 - 2916535 - g 95 -2.4 -5.95166 | GGCAATGAAAAAAAA GAGCTG ATCG CTGCCC TGGCAGCCCTGGTCT TERM 4590 2916695 - 2916669 - g 80 -10.1 -4.04206 | gap 1, overlap 2916670 CTACCTTTATATAAA GGGCCGGCTCCG GCAG CGGA-CCGGCCG CCCCCTTGGCATTCT TERM 4591 2916694 - 2916670 - g 79 -13.6 -3.02202 | gap 1, overlap 2916669 TACCTTTATATAAAG GGCCGGCTCCG GCAG CGGA-CCGGCC GCCCCCTTGGCATTC TERM 4592 2917266 - 2917299 + G 76 -13.2 -3.06696 | overlap 2917271 CCTGCCCTCTGTGTT TGTAGTCGCGGCCC TGGTCT GGGCCGCCATTACA TATATTCGGCACAGG TERM 4593 2917412 - 2917380 - g 75 -9.1 -4.05747 | gap 1, overlap 2917400 GACATTTCAGAGAAA CACCATCTGGGCCG ATGATA CGGCCCTG-TGGCG GGACGTGACAGAAAA TERM 4594 2917773 - 2917761 - g 73 -3.3 -4.78848 | CCTGGAAATACAAAA CACGC TGG GCGTT ATTCTGCTGGCCCAA Dole_2418 2916172 - 2918655 + | TPR repeat-containing protein TERM 4595 2919033 - 2919018 - g 95 -2.4 -5.95166 | GGCAATGAAAAAAAA GAGCTG ATCG CTGCCC TGGCAGCCCTGGTCT TERM 4596 2919178 - 2919152 - g 80 -10.1 -4.04206 | gap 1, overlap 2919153 CTACCTTTATATAAA GGGCCGGCTCCG GCAG CGGA-CCGGCCG TCCCCTTGGCATTCT TERM 4597 2919177 - 2919153 - g 79 -13.6 -3.02202 | gap 1, overlap 2919152 TACCTTTATATAAAG GGCCGGCTCCG GCAG CGGA-CCGGCC GTCCCCTTGGCATTC TERM 4598 2920183 - 2920193 + G 74 -2.4 -5.00616 | TGGACCGGCCCGATC AGGC AGA GCCG TTTTTTCAAAAAGCC TERM 4599 2920609 - 2920647 + G 70 -3.6 -4.62069 | gap 1, overlap 2920610 CAATCCGCGCCCTTG AGCAGGCAGTGGCCGCC TCCCCC GGCGACC-CGGCCCGCC TTTTTCAACTGGGCC TERM 4600 2920836 - 2920818 - g 75 -5.8 -4.56775 | overlap 2920819 ACCTGTTTTGAAAAA CTGGCCCG GCT CGCGCCGG ACAATGCCGTGGTCT Dole_2419 2918652 - 2921030 + | TPR repeat-containing protein TERM 4601 2921608 - 2921654 + G 72 -5.1 -4.56775 | gap 2, overlap 2921608 2921607 2921623 CATGGACACCATCTC CGACGCGGAC-CTGGAC-GGC ATCTCCG GCCAGGCCGGTGTGCGCGTTG TTTTTGGCGGCACCT TERM 4602 2921623 - 2921651 + G 74 -7.4 -4.40561 | overlap 2921608 2921607 2921608 CGACGCGGACCTGGA CG-GCATCTCCGGC CAG GCCGGTG-TGCGCG TTGTTTTTGGCGGCA Dole_2420 2921534 - 2922058 + | hypothetical protein TERM 4603 2922152 - 2922107 - f 87 -11.2 -4.09739 | opp_overlap 2922112, overlap 2922108 GGAAGGGTTTGAAAA CCTGAGTGTGGCGGAAACAG CAGAAT CTGTTTCCGCCACACTTTCA CCTCTCAAAAGAGAG TERM 4604 2922151 - 2922108 - f 81 -12.5 -3.05522 | opp_overlap 2922112, overlap 2922107 GAAGGGTTTGAAAAC CTGAGTGTGGCGGAAACAG CAGAAT CTGTTTCCGCCACACTTTC ACCTCTCAAAAGAGA TERM 4605 2922112 - 2922147 + F 100 -22.1 -3.63627 | opp_overlap 2922108 2922107 GGTTTGAAAACCTGA GTGTGGCGGAAACAG CAGAAT CTGTTTCCGCCACAC TTTCACCTCTCAAAA TERM 4606 2922201 - 2922222 + G 73 -10.9 -3.39574 | gap 1, opp_overlap 2922197, overlap 2922199 2922206 2922208 TGGAAAAAAGGTGTG GCAG-CCTGC ACA GCAGGGCTGC TGTTGCTGTTTTTTG TERM 4607 2922206 - 2922230 + G 86 -5 -5.28315 | gap 1, opp_overlap 2922197, overlap 2922201 2922199 2922208 AAAAGGTGTGGCAGC CTGC-ACAGCA GGGC TGCTGTTGCTG TTTTTTGCCTTTTCT Dole_2421 2922174 - 2922956 + | hypothetical protein TERM 4608 2923149 - 2923159 + F 75 -5.4 -4.76075 | AATGAGTCAATTTTT CCTT TAC AAGG TTTTCTTCGTATGCT Dole_2422 2923243 - 2923998 + | peptidase C39 bacteriocin processing TERM 4609 2924251 - 2924294 + G 82 -13.6 -3.30124 | opp_overlap 2924231 CGCCCCGTCCCTGGA CGGCAGCCGCGTGGCCCGCC TGCT GGCCGGCGAGGCCGCCGCCG TTCTGGAGACTCAGG TERM 4610 2924423 - 2924441 + G 77 -10.2 -3.80733 | opp_overlap 2924414 GCAGAAGCCGATGCA CCGGCGTC CCC GAAGCCGG TTGTTGTGGCATCAG TERM 4611 2924749 - 2924772 + G 75 -3.6 -4.74103 | overlap 2924737 TCAGGGCCAGGGTAC GGTGGCCGAC ATCG GCCGGGCCCC TTTTTCCGTTCAGGC TERM 4612 2925784 - 2925772 - g 83 -4.7 -5.0538 | overlap 2925774 CCTGACCTTAAAAAA GGTGG AAC CCTCC GGCGGCGCCGTGGGC Dole_2423 2924015 - 2926063 + | SH3 type 3 domain-containing protein TERM 4613 2926171 - 2926186 + G 89 -6 -5.04385 | overlap 2926173 GGCAGGCCATTCACG GACGGC TCAG GCCGCC TTTTTTGAAAATATC TERM 4614 2927105 - 2927127 + G 73 -3.4 -4.82333 | overlap 2927103 2927104 ATGAGCGCCTGGTTC GGCAGC TCTCCGCTGCT GCTGCC TTTTTCAATTATTCT Dole_2424 2926088 - 2927830 + | membrane protein involved in aromatic hydrocarbon degradation TERM 4615 2927843 - 2927820 - f 73 -5.4 -4.6575 | overlap 2927815 AGACAAAGGAGAAAA TGTCTTTC TAAACCCG GAAAGACA GAATCGACGATACCT TERM 4616 2927876 - 2927900 + F 95 -7.7 -5.44721 | opp_overlap 2927875 2927876 AAAACGATCAATAAG GGGGAAGGATC TAC GGTCCGCCCCC TTTTTTTCGCCTGAT TERM 4617 2928478 - 2928456 - g 83 -12 -3.7941 | opp_overlap 2928460 2928477, overlap 2928459 TAGGGCCCAGAATAA CGACGGCAAG GTG CTTGCCGTGG TGGACGGCAAGCCCG TERM 4618 2928475 - 2928459 - g 71 -12.3 -2.98545 | opp_overlap 2928460, overlap 2928456 GGCCCAGAATAACGA CGGCAAG GTG CTTGCCG TGGTGGACGGCAAGC TERM 4619 2928477 - 2928499 + G 86 -6.1 -4.89852 | opp_overlap 2928456, overlap 2928460 CAAGGTGCTTGCCGT GGTGGACGG CAAGC CCGGCCCCC TTTTTGTCAATGTAC TERM 4620 2928964 - 2928949 - g 100 -3.2 -5.86965 | opp_overlap 2928954 ATGGACGAAAAAAAA GGGC CCCTTATC GCCC GGCCCGACAAGGTGG TERM 4621 2929308 - 2929288 - g 89 -2.4 -5.75945 | overlap 2929291 2929292 ATGGGCGAAAAAAAA GAGGGGCC CTACC GGACCATC GGCATTCCCCGCACG Dole_2425 2928028 - 2929698 + | hypothetical protein Dole_2426 2930566 - 2929790 - | ribulose-1,5-biphosphate synthetase TERM 4622 2930012 - 2930024 + g 100 -9.1 -5.00616 | GCTGTCAGTCCGCAG GGTGC CGG GCACC TTTTTTGCCACCACG TERM 4623 2930238 - 2930206 - G 78 -6.1 -4.68424 | TAACGCAGTTAAAAA TGGCCACCCCGGC TTTGGCC GCCTGGGAGGTCA GGGTGGAGATCGCCT Dole_2427 2931926 - 2930646 - | thiamine biosynthesis protein ThiC TERM 4624 2930835 - 2930847 + g 72 -4.7 -4.61633 | CATATCGCGGTCCAG GGCGC CGG GCACC TTTTTGGCAATGTCT TERM 4625 2930992 - 2930962 - G 87 -9.7 -4.60143 | gap 2, opp_overlap 2930975 2930981, overlap 2930963 ACATAGCAGAGAAAA TCGGCGCC--GGCAG CCG CTGCCACGGCGCCGC CGATGGCGCCGGTGA TERM 4626 2930991 - 2930963 - G 79 -13.2 -3.35001 | gap 2, opp_overlap 2930975 2930981, overlap 2930962 CATAGCAGAGAAAAT CGGCGCC--GGCAG CCG CTGCCACGGCGCCG CCGATGGCGCCGGTG TERM 4627 2931073 - 2931061 - G 76 -4.7 -4.78149 | opp_overlap 2931064, overlap 2931063 CCCAGAACGTAAAAA GGGGC CCC GCCGC ACAGGGCTTTCTGCA TERM 4628 2932033 - 2931991 - H 100 -12.6 -4.72497 | opp_overlap 2931999, overlap 2931999 GACTCATCAATAAAA CGAACAAAGGGCCGTCCCCC TGC GGGAGACGGCCCTTCTAGCA TAAACAACCATACCG TERM 4629 2932025 - 2931999 - H 100 -21.6 -4.49531 | opp_overlap 2931999, overlap 2931991 AATAAAACGAACAAA GGGCCGTCCCCC TGC GGGAGACGGCCC TTCTAGCATAAACAA TERM 4630 2931999 - 2932025 + H 100 -19.4 -3.32844 | opp_overlap 2931999 2931991 AATAAAACGAACAAA GGGCCGTCCCCC TGC GGGAGACGGCCC TTCTAGCATAAACAA TERM 4631 2932767 - 2932755 - g 90 -6.2 -5.32882 | opp_overlap 2932755 GACCAGTATAAAAAA CGGG GCGTG CCCG TTATTATGGGCGGAT TERM 4632 2933088 - 2933076 - g 70 -4.7 -4.52857 | opp_overlap 2933079, overlap 2933077 AGCCGCCATAGAAAA CGGCC GGT GGCGG ATGTGCTGGCCGACA Dole_2428 2932473 - 2933906 + | radical SAM domain-containing protein TERM 4633 2934187 - 2934170 - g 78 -3.3 -5.04385 | overlap 2934172 GACAGGCGGAAAAAA CCGCCGT CAAA ACACCGG CAGAAAAGCCCCTTT TERM 4634 2935030 - 2934993 - g 74 -7.9 -4.21275 | gap 1, opp_overlap 2934999, overlap 2934999 GGAAGGCATTGAAAA TGA-AAAGGTGCTGCA CACCCCC TGCGGCACCTTTGTCA CCCTGACCCTGGATG TERM 4635 2934999 - 2935023 + G 75 -9.3 -3.87815 | opp_overlap 2934993 2934999 CATTGAAAATGAAAA GGTGCTGCA CACCCCC TGCGGCACC TTTGTCACCCTGACC TERM 4636 2935023 - 2934999 - g 79 -7.1 -4.68645 | opp_overlap 2934999, overlap 2934993 CATTGAAAATGAAAA GGTGCTGCA CACCCCC TGCGGCACC TTTGTCACCCTGACC Dole_2429 2934001 - 2935455 + | hypothetical protein TERM 4637 2935557 - 2935568 + G 84 -2.2 -5.44119 | overlap 2935549 2935546 CCGGCAACGAATGGA CCAT TGCG GTGG TTTTTTTCAACTGGC TERM 4638 2935856 - 2935883 + G 78 -11.2 -3.64703 | gap 1, overlap 2935874 CTGGTGCTCCGGTCC CGGGAGC-CCGGC TAT GCCGGCGCCTCCG TTTACATGACCGACA TERM 4639 2935874 - 2935924 + G 78 -9.5 -3.94823 | opp_overlap 2935893 2935900, overlap 2935856 2935904 GAGCCCGGCTATGCC GGCGCCTCCGTTTACATGACCGA CAACA TCGGGGACGTGGCCGGCGGCGCC TTGTTCTCCTTTGTG TERM 4640 2935967 - 2935984 + G 82 -6.3 -4.78107 | gap 1 GCCACCCCCATGACG GCCC-TGA TGA TCACGGGC TTTTTCCTGCTGATC TERM 4641 2936570 - 2936597 + G 83 -14 -3.39668 | overlap 2936564 2936571 TCTTTCTTTGTTCAG GCCCGCCGGCGG CTTT CCCCCGGCGGGG TTCTGGCCTTTGCCA TERM 4642 2936571 - 2936596 + G 87 -17.5 -2.6348 | overlap 2936570 2936564 CTTTCTTTGTTCAGG CCCGCCGGCGG CTTT CCCCCGGCGGG GTTCTGGCCTTTGCC Dole_2430 2935439 - 2937553 + | spermine synthase TERM 4643 2937647 - 2937635 - g 71 -6.9 -4.15044 | opp_overlap 2937643, overlap 2937637 2937638 CCTGTGGGGAACAAA GACCC GCC GGGCC TCCGGCCCTTCTGAT TERM 4644 2938701 - 2938673 - g 88 -5.3 -5.24129 | opp_overlap 2938680 2938698 2938699, overlap 2938649 2938674 2938675 GCCGGGCATAAAAAA CGGCCGGTG-CGC CGCGT GCGGCACC-GCCA TACCCGGGGTGTGGG Dole_2431 2937531 - 2938721 + | radical SAM domain-containing protein TERM 4645 2938885 - 2938874 - g 77 -2.2 -5.12707 | overlap 2938878 TGAAACGTGAAAAAA CAAC CCAG GCTG CTGCTGACCGGCGCA TERM 4646 2939283 - 2939253 - g 89 -6 -5.03314 | overlap 2939254 CCGATCTTGAAAAAA CCGTTGAGGCAGAC CAT GTCTGCATCGGCGA GGGCATTCGGTTCGT TERM 4647 2940106 - 2940128 + G 73 -12.6 -2.78018 | overlap 2940103 AAAGGAGTTCCACGA GCTGGGCCCG GGC CTGGCCCGGC TGATTCATACCACCT Dole_2432 2938865 - 2940472 + | radical SAM domain-containing protein Dole_2433 2942010 - 2940502 - | radical SAM domain-containing protein TERM 4648 2941330 - 2941342 + g 72 -4.8 -4.64992 | GCAGCCCCGGCTGGA CACG ATGGG CGTG TTTCTCTTTTTTCGC TERM 4649 2941459 - 2941481 + g 74 -7.6 -4.25104 | CTCTATCCATGTGGT GCGGGGATTG ACC TGAACCCCGC TTTTGGTGCGAAAGG TERM 4650 2941815 - 2941840 + g 71 -8.1 -4.07568 | CCCGCTCAATCTTTT CGCTGACCGCC ACCC GGCGGGCGCCG TTTTCGGCCAGGCAG Dole_2434 2943569 - 2942007 - | radical SAM domain-containing protein TERM 4651 2942127 - 2942108 - G 83 -5.6 -4.89339 | overlap 2942121 AATCACGCAGAAAAA CCGGCCGA AAGA TCAGACGG CGGCTGTACCAGGCC TERM 4652 2942562 - 2942541 - G 74 -11.5 -3.55761 | opp_overlap 2942552 TACGTATTTTTCAAA GGAGGCCGG GTCC CCGGACTCC ACGGCCAGGGTAATT Dole_2435 2945144 - 2943570 - | radical SAM domain-containing protein TERM 4653 2944766 - 2944806 + g 74 -7.6 -4.14013 | gap 2, opp_overlap 2944765 CCGGCAGAAAAGAGG GGTGGGTGCCG-C-CGGTGA CAA TCACCATGTCGGGATCCACC TTTTCCCGGATTTTC TERM 4654 2945163 - 2945208 + H 71 -7.1 -4.03078 | gap 1 AATAGCGATCTCCCT GGTTTCC-ATCCATAAATGG CCTTTTC TCATTTCTGGGTTGGAAACC TTTGTCGTGTCCTCA TERM 4655 2945588 - 2945574 - g 76 -4.9 -4.74706 | opp_overlap 2945578 2945579, overlap 2945578 CGGAAGACGCAAAAA CCACC CTGCT GGCGG CCCAGAAGCTGTTTG Dole_2436 2945429 - 2945695 + | ribosomal protein S20 Dole_2437 2946293 - 2945760 - | hypothetical protein TERM 4656 2945789 - 2945800 + g 80 -2.2 -5.24129 | TCATTCGGTTGTAGA TGGT TTCC GCCA TTTTTTCTGAAAGCC TERM 4657 2945809 - 2945832 + g 88 -15.4 -3.57418 | opp_overlap 2945813, overlap 2945813 TCCGCCATTTTTTCT GAAAGCCGCA TAAT TGCGGCTTTC TTGCTTTCCTCGGTC TERM 4658 2945813 - 2945828 + g 88 -10.4 -4.41302 | opp_overlap 2945813, overlap 2945809 CCATTTTTTCTGAAA GCCGCA TAAT TGCGGC TTTCTTGCTTTCCTC TERM 4659 2945828 - 2945813 - G 71 -10.4 -3.53444 | opp_overlap 2945813 2945809 CCATTTTTTCTGAAA GCCGCA TAAT TGCGGC TTTCTTGCTTTCCTC TERM 4660 2946509 - 2946490 - R 76 -10 -3.62096 | gap 1 TTTGAGCACCGCAAA GCGGGCGAG TTC CT-GCCCGC GCCGAAAAAAGTATT Dole_2438 2949205 - 2946608 - | leucyl-tRNA synthetase TERM 4661 2947719 - 2947729 + g 77 -2.4 -5.03747 | TCCATGGTGTCGGTC TCCC GCC GGGC TTTTTTCCCGCATTT TERM 4662 2949258 - 2949276 + H 77 -10.2 -3.57144 | TCCAGGCGCTGTTAT CGCGGTTG AAT CCACCGCG TTTGAAAATACCGGC TERM 4663 2949331 - 2949285 - H 81 -10 -4.07885 | opp_overlap 2949284 2949287, overlap 2949287 2949288 CACCGCGTTTGAAAA TACCGGCGGCAGAGCGCCTG TATGGAG CAGGCGCCCGGCCGGCAATG CTTCTCCATTATCAC TERM 4664 2949329 - 2949287 - H 90 -12.6 -3.63744 | opp_overlap 2949287 2949284, overlap 2949285 2949288 CCGCGTTTGAAAATA CCGGCGGCAGAGCGCCTG TATGGAG CAGGCGCCCGGCCGGCAA TGCTTCTCCATTATC TERM 4665 2949328 - 2949288 - H 88 -13.9 -2.78032 | opp_overlap 2949287 2949284, overlap 2949287 2949285 CGCGTTTGAAAATAC CGGCGGCAGAGCGCCTG TATGGAG CAGGCGCCCGGCCGGCA ATGCTTCTCCATTAT TERM 4666 2949836 - 2949881 + G 78 -8.1 -4.50159 | opp_overlap 2949812 2949863 GGAGATGCTGGTCCA GGTGGTCAAGGACCCGATCAT GCAC AAGGGCGCGGCCCTGACCACC TTTCTTTCCATTCCG TERM 4667 2950899 - 2950889 - g 77 -2.4 -5.06414 | CCTGCTCAACAAAAA GCGC ACC GAGC TGCTGGAGCTGGAGG Dole_2439 2949534 - 2951033 + | ribonuclease TERM 4668 2951187 - 2951210 + G 100 -8.8 -5.60993 | TTCTGGCGGCGGTGC TTCTTGCGGC CCTG GCCGCCGGAA TTTTTTTCTGGCACA TERM 4669 2951418 - 2951378 - g 76 -4.6 -4.8622 | gap 1, overlap 2951380 CGGCGTAAGGAAAAA TACGGCCTGGACACC-GGT GTGG ACCTGGTGGCCAGGGAGGA TGAGGCCGTAAAAGT Dole_2440 2951123 - 2951905 + | hypothetical protein TERM 4670 2952258 - 2952239 - g 76 -3.4 -5.00884 | overlap 2952241 2952242 ATTGCCGCCAAAAAA CAGGCCAG TGCC CCTGCCCG GGCGGATAAAGCCGA Dole_2441 2951999 - 2952292 + | preprotein translocase, YajC subunit Dole_2442 2952318 - 2953892 + | protein-export membrane protein SecD TERM 4671 2954290 - 2954260 - g 79 -5.2 -4.8066 | overlap 2954261 2954287 AAGACAAGGTAAAAA CCGCCCTGGCCGGC GCC ACCGGACAGACCGC GGAGATCACCAGGGT Dole_2443 2953917 - 2954960 + | preprotein translocase subunit SecF TERM 4672 2955121 - 2955150 + F 100 -10.7 -4.56597 | gap 1 GCCCTTCGTGTTGAA GCGGCTGAACCTTC TCA GAAGGC-CGGCCGC TTTTTAACACGACGC TERM 4673 2955888 - 2955865 - g 86 -14.6 -3.21726 | gap 1, opp_overlap 2955860, overlap 2955858 CCGGAGAACATGGAA CTGGCCCGGCG CAT CGCCGGG-CAG GGGGCCGTGATATCA TERM 4674 2956371 - 2956355 - g 100 -12.3 -4.56597 | TGGCGCCGGGAAAAA CAGCAGG CAT CCTGCTG CAACTGGAACTCAAA Dole_2444 2955310 - 2956479 + | DNA protecting protein DprA TERM 4675 2957550 - 2957533 - g 89 -2.5 -5.78622 | overlap 2957536 TTACCGCAAAAAAAA CCATGGC CGTG GCCCAGG AGCTCTATGAAGGCA TERM 4676 2957694 - 2957708 + G 78 -4.2 -5.00616 | overlap 2957690 2957690 GGCAATGACTACGCG CCGG ACCGGCC CCGG TTTTTTGCCAACAAA TERM 4677 2958148 - 2958137 - g 79 -7.2 -4.65078 | AGAGCTGGAAGAAAA CGGC ATCG GCCG GCCCAGTACGTATGC TERM 4678 2958259 - 2958279 + G 74 -8.3 -4.11394 | TCGTCAACGACCTTC TGGTGGAAA ACT TTCCCACCA TTTTAGACATCGAAT Dole_2445 2956710 - 2958986 + | DNA topoisomerase I TERM 4679 2959780 - 2959794 + G 88 -5.6 -5.26875 | TGCTGGCCGTATGCT GCGGCG CCA TGTCGC TTTTTTACTTCGGCA Dole_2446 2959008 - 2960819 + | chloride channel core TERM 4680 2962214 - 2962201 - g 72 -9.5 -3.63744 | overlap 2962180 2962199 CCGGGTCCTAAAAGA GGCGG CCTT CCGCC TGACCGGGCTGCTGC Dole_2447 2961314 - 2962543 + | diguanylate cyclase with PAS/PAC sensor Dole_2448 2962991 - 2962653 - | histidine triad (HIT) protein TERM 4681 2962723 - 2962712 - G 75 -3.6 -4.81551 | opp_overlap 2962721, overlap 2962713 2962716 GATGGATATGAAAAA CCGA CTGG CCGG CTTCGGCGCCGTTGT TERM 4682 2963080 - 2963026 - H 77 -6.5 -4.49337 | gap 1, overlap 2963075 TCAGAATTTACAAAA CCCCCCTTTGCTGAAAAAAG-GAA GAAGCGAT TTCACGAAATTCAGCAAAGGGGGG AACCGGAAAAAACCT TERM 4683 2963171 - 2963134 - g 95 -18.4 -2.62184 | opp_overlap 2963150 2963162, overlap 2963159 CTTTCCTGTATATCA CCGGGCCCGGCCCATC GTCAAG AAAGGGCCGGGCCCGA TGCGGGGCGCGGTTC TERM 4684 2963169 - 2963159 - g 74 -8.2 -4.16842 | opp_overlap 2963150 2963162, overlap 2963134 CCCATCGTCAAGAAA GGGC CGG GCCC GATGCGGGGCGCGGT TERM 4685 2963162 - 2963183 + G 72 -8.6 -3.87538 | opp_overlap 2963159 2963134, overlap 2963150 ATCGTCAAGAAAGGG CCGGGCCC GATGCG GGGCGCGG TTCTTCTGGTACTTT TERM 4686 2963352 - 2963324 - g 72 -9.6 -3.72576 | gap 1 GTGGCGCCCATTAAA GGATCAGCCGCAC TGGG GTGCGG-TGCTCC CGGGGATGCACGGCC Dole_2449 2963033 - 2963518 + | hypothetical protein TERM 4687 2963595 - 2963577 - f 72 -10.2 -3.07816 | opp_overlap 2963567 2963565 CTTCGAGCGAGGGAA GCCACGCC TGT GGTGTGGC CAAGCTGCGGGGCGC TERM 4688 2963600 - 2963612 + F 71 -6.9 -4.29953 | overlap 2963597 TGTGGTGTGGCCAAG CTGCG GGG CGCGG TTCTTTTGGTACTTT Dole_2450 2963759 - 2964442 + | cell division ATP-binding protein FtsE Dole_2451 2964439 - 2965320 + | hypothetical protein TERM 4689 2965483 - 2965470 - g 77 -2.3 -5.08824 | GGCGTACTGAAAAAA GGCAC TCAG GTGAC GGTGTTGGACGATAC TERM 4690 2965869 - 2965838 - g 95 -6.4 -5.53288 | overlap 2965839 2965840 GCGAATCGAAAAAAA CCGGCATCAGGCGG CCCG CCGCCTGACGGCCC TGTACAAGCTGGAAC TERM 4691 2965868 - 2965839 - g 75 -9.9 -3.90888 | overlap 2965838 2965840 CGAATCGAAAAAAAC CGGCATCAGGCGG CCCG CCGCCTGACGGCC CTGTACAAGCTGGAA TERM 4692 2965867 - 2965840 - g 77 -13.4 -2.93448 | overlap 2965839 2965838 GAATCGAAAAAAACC GGCATCAGGCGG CCCG CCGCCTGACGGC CCTGTACAAGCTGGA TERM 4693 2966124 - 2966114 - g 78 -8.2 -4.48987 | opp_overlap 2966120, overlap 2966084 2966115 2966116 GCTGGACAAGGAAAA GGCG CGC CGCC AGCGGCTGCTGGTCG Dole_2452 2965383 - 2966675 + | peptidase M23B TERM 4694 2967413 - 2967380 - g 85 -10.1 -4.30014 | CCGATGAACTGAAAA CCGCCCTGGCCGGGC TGGA GGCCGACAATGGCGG CGACCTGAAGGGCCT Dole_2453 2966725 - 2968092 + | carboxyl-terminal protease TERM 4695 2968161 - 2968129 - g 100 -6.1 -6.19443 | CAGATGAAAAAAAAA CGACGCACTCCGGCC ACT GCCCGCAAGGCATCG GCCCCTTCGACACCG TERM 4696 2968239 - 2968252 + G 81 -3.7 -5.06414 | overlap 2968236 2968235 TCTCGGAGCAGCGGC CCTGG TGGG CCTGG TTTTTCTTCCCGACA Dole_2454 2968117 - 2969064 + | protein of unknown function DUF610 YibQ Dole_2455 2970473 - 2969565 - | ribosomal protein L11 methyltransferase TERM 4697 2970792 - 2970779 - H 73 -2.3 -5.04325 | overlap 2970748 2970783 2970784 TTCAAACCAGAAAAA CAGAC CCGT GTCGG TGACGCGATAACAGC TERM 4698 2971746 - 2971733 - g 78 -3.7 -5.02074 | overlap 2971718 2971734 CCATTTTTTAAAAAA GGCCG TTTG CGGCG GTAAAAAATTTTCAG Dole_2456 2970885 - 2971784 + | hypothetical protein Dole_2457 2972884 - 2971868 - | transposase IS4 family protein TERM 4699 2973791 - 2973769 - g 76 -12 -3.35813 | CTGGATTCGAATCAA TGATGCGGGG TCT CCCGGCATCA GCCTGGGCGATGGCC Dole_2458 2973044 - 2977153 + | outer membrane autotransporter TERM 4700 2977201 - 2977163 - f 100 -16.7 -3.1634 | opp_overlap 2977164 2977164 2977165 TTCTAAACCACCCAA TCCGGCATGCCGGCCAA TACCT TCGGCCGGCATGCCGCT GTTATAAATCAAAAG TERM 4701 2977164 - 2977200 + F 100 -18 -3.24924 | opp_overlap 2977163, overlap 2977164 2977165 TCTAAACCACCCAAT CCGGCATGCCGGCCAA TACCT TCGGCCGGCATGCCGC TGTTATAAATCAAAA TERM 4702 2977164 - 2977202 + F 82 -11.8 -3.35679 | gap 2, opp_overlap 2977163, overlap 2977164 2977165 TCTAAACCACCCAAT C--CGGCATGCCGGCCAA TACCT TCGGCCGGCATGCCGCTG TTATAAATCAAAAGC TERM 4703 2977165 - 2977199 + F 100 -21.5 -2.5474 | opp_overlap 2977163, overlap 2977164 2977164 CTAAACCACCCAATC CGGCATGCCGGCCAA TACCT TCGGCCGGCATGCCG CTGTTATAAATCAAA TERM 4704 2977245 - 2977211 - f 100 -17.3 -2.91276 | opp_overlap 2977216, overlap 2977216 GCCGCTGTTATAAAT CAAAAGCCGCTGTCC TTTCC GGACAGCGGCTTTTT TTGTGCCCGTTGCCT TERM 4705 2977240 - 2977216 - f 100 -17.2 -4.61873 | opp_overlap 2977216, overlap 2977211 TGTTATAAATCAAAA GCCGCTGTCC TTTCC GGACAGCGGC TTTTTTTGTGCCCGT TERM 4706 2977216 - 2977240 + F 100 -17.2 -5.61596 | opp_overlap 2977216 2977211 TGTTATAAATCAAAA GCCGCTGTCC TTTCC GGACAGCGGC TTTTTTTGTGCCCGT Dole_2459 2977358 - 2978479 + | hypothetical protein TERM 4707 2978580 - 2978602 + F 74 -2.7 -5.10765 | gap 1, opp_overlap 2978580, overlap 2978590 AATTTGCAAAAATAT CGGCC-GA CTTGCTTT TCAGGCCG TTTTGTTATTTATTT TERM 4708 2978852 - 2978836 - g 72 -5.1 -4.56597 | GCTGGGCTGGAAAAA CATGCCC GGC AGACATG TGCATCCCGGATATT Dole_2460 2978654 - 2979766 + | hypothetical protein TERM 4709 2980169 - 2980154 - g 79 -6.8 -4.59773 | gap 1, opp_overlap 2980155, overlap 2980155 CGCCACCCTGAAAAA GGCCGGC CTT GCC-GCC TTCCATTTTCACGTG Dole_2461 2979777 - 2981024 + | radical SAM domain-containing protein TERM 4710 2981971 - 2981945 - g 72 -8.6 -3.92659 | CCTGGAAAATCTAAA GCGAGTGCCGCC CGT GCCGGCATTCAC CCCCCACCGTATGGG TERM 4711 2982358 - 2982339 - g 85 -3.4 -5.39755 | opp_overlap 2982355 GATAACCAGAAAAAA GAGCTGGC AATG ACCGGCCC CGTTTGGCGCTTCTG Dole_2462 2981067 - 2982737 + | hypothetical protein Dole_2463 2983767 - 2982820 - | ribonuclease III TERM 4712 2983544 - 2983517 - G 81 -12.6 -3.53224 | GACGCTTTTGCCAAA CCGGCCCGCAAG GCGG CATGCTGGCCGG CGTGGCGGGCCAGAC Dole_2464 2984786 - 2983782 - | hypothetical protein TERM 4713 2984302 - 2984275 - G 86 -14.8 -3.1875 | TACAGGCGAACGGAA TGCCGGCACCGG AAGT CCGGCGCCCGCA TCCTGCCGGGCTGAT TERM 4714 2984428 - 2984459 + g 79 -7.2 -4.56597 | gap 1 TGTTGCATGCCCTCT TTGC-GGGCCTCGGC AAG GACGGTGCCCAGCAA TTTTTCCGCGACCCG TERM 4715 2984523 - 2984510 - G 72 -5.9 -4.41616 | opp_overlap 2984512, overlap 2984512 AGGGCGCTAAAGAAA CCGGC CAGA ACCGG CCCATTTTTTTGCCA TERM 4716 2984596 - 2984572 - G 85 -11.3 -4.08767 | overlap 2984573 GGCAGGCCCTGAAAA CCGGCAAGCCC GAC GGGCGTGCCGT TCCACAGCGCGGCCC TERM 4717 2984595 - 2984573 - G 83 -14.8 -3.05046 | overlap 2984572 GCAGGCCCTGAAAAC CGGCAAGCCC GAC GGGCGTGCCG TTCCACAGCGCGGCC TERM 4718 2984631 - 2984621 - G 74 -2.4 -4.96848 | CGGCCCAGAGAAAAA GAGG CCC CCGC ACATACTGGTCCCAG TERM 4719 2985875 - 2985857 - g 86 -5.8 -5.11613 | ATACTATTGAAAAAA GCCTGCCG GAA CTGCTGGC CGCCATACGGTCGAC TERM 4720 2986354 - 2986331 - g 100 -13.2 -6.32216 | opp_overlap 2986334 2986335 2986345 AGATAGAAAAAAAAA TAACGGCCCG CACC CGGGCCATTA TTCCCGTTCATATAG TERM 4721 2986335 - 2986350 + G 70 -11.8 -2.80879 | opp_overlap 2986331, overlap 2986334 2986345 AGAAAAAAAAATAAC GGCCCG CACC CGGGCC ATTATTCCCGTTCAT TERM 4722 2987016 - 2987005 - g 78 -3.6 -5.00616 | TTCGGCTTTAAAAAA GAGG ATTT CCCC CACGCCGCCTATATC Dole_2465 2984965 - 2987139 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 4723 2987137 - 2987151 + F 77 -4.3 -5.03409 | opp_overlap 2987137 TTTTATCAAAAAGCA TGACA CCGGT TGTCA TTATTTTTTTTATGG TERM 4724 2987604 - 2987592 - g 95 -10.5 -4.72272 | opp_overlap 2987594, overlap 2987593 2987594 GTTTTTTACGAAAAA CCGGC CTG GCCGG GGGCCTGGCCTTTTT TERM 4725 2987614 - 2987594 - g 74 -13.9 -2.65504 | opp_overlap 2987594, overlap 2987592 2987593 TTTTTACGAAAAACC GGCCTGGCC GGG GGCCTGGCC TTTTTCATCAGTATG TERM 4726 2987594 - 2987614 + G 100 -13.9 -4.76041 | opp_overlap 2987592 2987594 2987593 TTTTTACGAAAAACC GGCCTGGCC GGG GGCCTGGCC TTTTTCATCAGTATG TERM 4727 2989325 - 2989308 - g 89 -2.6 -5.75342 | opp_overlap 2989314 TCGGCGTAAAAAAAA CCGGGA GGCGCG TCCTGG CCGGCCTCGTTGCCG TERM 4728 2989328 - 2989355 + G 100 -5.5 -6.02914 | gap 1, overlap 2989314 AGGCGCGTCCTGGCC GGCCTCGTTGCC GCAGG GGCACTG-GGCC TTTTTTTTCTGTGGC Dole_2466 2987201 - 2990023 + | hypothetical protein Dole_2467 2990762 - 2990007 - | glycosyl transferase family protein TERM 4729 2991434 - 2991455 + GH 84 -7.4 -4.7254 | AGTTTTACGGGGGCG CGAACAAT ATCACA ATTGTTCG TTTTTCCTCGGACAT TERM 4730 2992085 - 2992097 + GH 85 -3.3 -5.4505 | overlap 2992086 ACGTCGGTGATCATG GCTCG TTT CGAGA TTTTTTCTTCAACAC Dole_2468 2991193 - 2992323 + | hypothetical protein Dole_2469 2992289 - 2993641 + | hypothetical protein TERM 4731 2993959 - 2993988 + G 90 -4.9 -5.4588 | gap 1, overlap 2993961 CATCTTTCCAGCATG GTGCTTCA-CGCCG GTA CGGTGCTGGGGCTC TTTTTTCTGCTTTTC TERM 4732 2993961 - 2993986 + G 72 -6.1 -4.32919 | gap 1, overlap 2993959 TCTTTCCAGCATGGT GCTTCA-CGCCG GTA CGGTGCTGGGGC TCTTTTTTCTGCTTT TERM 4733 2994344 - 2994303 - g 100 -7.1 -5.75342 | gap 1, opp_overlap 2994314, overlap 2994304 CCGCTTCAAAAAAAA CCCGGCAACCGGCCGGCAAC CAG GCTTTTGGCCGGT-GCTGGG TGAAAAAATTCCCTT TERM 4734 2994318 - 2994304 - g 75 -8.5 -4.04482 | opp_overlap 2994314, overlap 2994303 CGCTTCAAAAAAAAC CCGGC AACCG GCCGG CAACCAGGCTTTTGG TERM 4735 2994703 - 2994722 + G 87 -9.2 -4.57474 | ATCCAGTCCGGGCCC TGGCCGGC CATG GCCGACCA TTTTGTCTACCTTCC Dole_2470 2993656 - 2995401 + | TPR repeat-containing protein TERM 4736 2995484 - 2995455 - f 80 -12.1 -2.87132 | GGCGGGTCGGATATA CTGCCGTTCAGCA TCAG TGCGGCACGGCAG GACACGCATCAGAAA TERM 4737 2996188 - 2996200 + G 72 -6.2 -4.36914 | overlap 2996187 GGCTTCAACTGGTCC GGCG CAGGC CGCC TTTTGTGGGAAAAAA TERM 4738 2996207 - 2996220 + G 74 -2.3 -4.95876 | overlap 2996209 CAGGCCGCCTTTTGT GGGAA AAAA TGCCC TTTTTCGTTCTGATT TERM 4739 2996414 - 2996425 + G 78 -3.6 -4.93296 | TTCCCGTATGGAAAG TGGC CGGC GCCG TTTTTCTCCTGCTGG TERM 4740 2997050 - 2997002 - g 100 -28.9 -3.04144 | overlap 2997042 2997043 CCGCCACCTTTAACA GCCTGGGCCTTGTGCAGGCGGCC CAG GGCCGCCTGCACAAGGCCATTGC CAGCTACCAAAAGGC TERM 4741 2997077 - 2997043 - g 71 -12.9 -2.57132 | gap 1, overlap 2997002 2997042 2997063 GGCCGCCTGCACAAG GCCATTGCCAGCTACC AAAA GGC-GCTGGCACTGGC GCCCGACTTTGCCCA TERM 4742 2997292 - 2997234 - g 75 -5.3 -4.59773 | overlap 2997239 CCTGACCCTCAAAAA CAGACCGGCCGAGGCTGCCC-GCCACTAT GAA ATACTGACCGGGCAGGCTCCGGC-ATCCG CCGACCTGAACTACC Dole_2471 2995519 - 2997450 + | TPR repeat-containing protein TERM 4743 2998294 - 2998282 - g 76 -3.3 -5.0133 | CACTGCTGGAAAAAA CGGGA GCC TGCCG ATATCGTGGATGAAA TERM 4744 2999063 - 2999044 - g 78 -6.3 -4.60924 | overlap 2999046 GAAATCCGGCAAAAA CTGGCCC TCCACC GGGCCGG AAAGGACCGGCGGCC Dole_2472 2997559 - 2999082 + | radical SAM domain-containing protein Dole_2473 3000494 - 2999088 - | radical SAM domain-containing protein TERM 4745 2999374 - 2999362 - G 78 -3.3 -5.03715 | ATCACCGTGAAAAAA TGGGC CAG GTCCA GCTTTGATTTCACCG TERM 4746 3000320 - 3000301 - G 73 -2.8 -4.83169 | ACCTGTGGAGAAAAA CCGGTC AGCATGGA GACCAG TTCGGCCCGGCGATG TERM 4747 3000649 - 3000625 - H 100 -10.8 -5.7946 | CCGGCAACAAAAAAA GGGTTTTCGA CAGTC CCGAAAACCC CGATGTGTATGTGGC TERM 4748 3000851 - 3000833 - H 72 -10.2 -3.06815 | ATGTCCCGCAACACA GTCCCGCC CAT GGCGGGAT CAAGGCAACTCGCCC TERM 4749 3001279 - 3001257 - H 87 -5.5 -5.45802 | gap 1, overlap 3001259 CCCCGAAAACAAAAA CAGGCC-GTG CGCG CACCGGCCGG TAATAACGAATATGA TERM 4750 3001277 - 3001259 - H 74 -6.7 -4.3613 | gap 1, overlap 3001257 CCGAAAACAAAAACA GGCC-GTG CGCG CACCGGCC GGTAATAACGAATAT TERM 4751 3001337 - 3001321 - g 85 -11.5 -4.08216 | TCAGCTTCCGCAAAA CCGGCCC GCA AGGCCGG CCCGGCATCAAAAAC Dole_2474 3001291 - 3002256 + | RNA polymerase sigma 70 family subunit TERM 4752 3002369 - 3002343 - g 88 -11.4 -4.10161 | CACCACCCTGCAAAA GGGCGGTCCGGC AAA ACCGGCCCGCAC CCCGTCGGCCAACAG TERM 4753 3002973 - 3002985 + G 71 -6.9 -4.2349 | GGTAACGGTAACGTC CGGGG ACA CCCTG TTTTCCCTCTGCCGC Dole_2475 3002260 - 3004158 + | peptidoglycan-binding LysM Dole_2476 3004155 - 3004937 + | hypothetical protein Dole_2477 3005935 - 3005456 - | UspA domain-containing protein TERM 4754 3005922 - 3005941 + g 80 -9.2 -4.16279 | overlap 3005923 CCTGTATCTTTCTGA ACCCGGGT TTGC ACCCGGGG TTTTCACCTCATATC TERM 4755 3005923 - 3005940 + g 76 -12.7 -3.09286 | overlap 3005922 CTGTATCTTTCTGAA CCCGGGT TTGC ACCCGGG GTTTTCACCTCATAT Dole_2478 3006874 - 3005960 - | hypothetical protein TERM 4756 3006357 - 3006393 + g 84 -15.9 -2.52543 | overlap 3006319 TGGTCGTTGCGAATG TCGCCGTGCTTCAGGCC GTT GGCGTGAAGCATGCCGA TGCCTTCAAACGCCT Dole_2479 3007447 - 3006878 - | putative phytochrome sensor protein Dole_2480 3008253 - 3007444 - | leucyltransferase TERM 4757 3008130 - 3008143 + gr 76 -9.5 -3.64703 | opp_overlap 3008121 3008120 AAAGATCTCCCCCCA CGGCC AGCA GGCCG TTTGCATCGGCAAGG Dole_2481 3010483 - 3008228 - | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 4758 3008891 - 3008908 + gr 73 -3.4 -4.74453 | gap 1, opp_overlap 3008873, overlap 3008893 GGGGGGCGCGCCGAT CA-GCCG GGCCA CGGCGTG TTTTTCCATGTATTC TERM 4759 3009985 - 3009995 + gr 95 -6.8 -5.45802 | opp_overlap 3009976 TGAATACCTCCAGGG GGTC GGT GACC TTTTTCTTTTCCGGC Dole_2482 3011070 - 3010756 - | ATP-dependent Clp protease adaptor protein ClpS TERM 4760 3011215 - 3011255 + r 89 -6.2 -5.28755 | overlap 3011217 3011217 GGATCACTTCAGATT GCCG--GCCGGCCGGCCGCC CGTTT GGCG-CCG-CCGGCAGTGGC TTTTTTCGTGTGTTT TERM 4761 3011217 - 3011251 + r 78 -11.4 -2.949 | gap 2, overlap 3011217 3011215 ATCACTTCAGATTGC CGGCCGGCCGGCCGCC CGTTT GGCG-CCG-CCGGCAG TGGCTTTTTTCGTGT TERM 4762 3011302 - 3011318 + r 75 -10.1 -3.35597 | opp_overlap 3011301 3011302, overlap 3011300 GCCACAAAAATCAAG TCCGGGT CAG GCCCGGA TATTTCACGGGTCAG Dole_2483 3013909 - 3011330 - | preprotein translocase, SecA subunit TERM 4763 3011479 - 3011489 + g 71 -6.8 -4.10657 | AATCCTGCTCCTCGG GCTG CAT CAGC TTTTCCACGGTATCC TERM 4764 3013064 - 3013091 + g 81 -9.1 -4.32049 | gap 1 CGCTTTTGCCACGCC GGCCTCGGTCAG GGTCA CGGACCG-GGCC TTTTCATCAATTGTA TERM 4765 3013722 - 3013703 - G 77 -12.2 -3.53012 | opp_overlap 3013703 3013699 3013697, overlap 3013717 CTCGCCTTCCTGAAA CCGCTGTT TGAA AACAGCGG TCTGCTGTTTCAGCG TERM 4766 3013703 - 3013722 + g 71 -12.2 -2.97021 | opp_overlap 3013703 3013717, overlap 3013699 3013697 CTCGCCTTCCTGAAA CCGCTGTT TGAA AACAGCGG TCTGCTGTTTCAGCG Dole_2484 3014998 - 3014057 - | peptidase M23B TERM 4767 3015175 - 3015142 - R 82 -5.1 -5.0538 | overlap 3015162 GTTCATTGTAAAAAA GGTCGGGCCTTGATT ACAT AGTCGGCGCCCGACC AGACGGTAAGCACCA Dole_2485 3015692 - 3015129 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 4768 3015427 - 3015386 - G 78 -8.5 -4.09963 | gap 1 CCCGAATAACAATAA TGCAGGCCACC-CACCCCGG CAC CCGGCCGGCGGCGGCCAGCA TAATAAACGCCGCCG Dole_2486 3016397 - 3015753 - | putative transaldolase TERM 4769 3016253 - 3016263 + g 73 -3.2 -4.7871 | CCGGACCGTCCACCA CGTC GCA GATG TTTTTGATAATGGTT Dole_2487 3016701 - 3016432 - | TRASH domain-containing protein Dole_2488 3017249 - 3016698 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Dole_2489 3017673 - 3017242 - | fibronectin type III domain-containing protein Dole_2490 3019063 - 3017663 - | argininosuccinate lyase TERM 4770 3017699 - 3017730 + g 95 -6.4 -5.42259 | gap 1, overlap 3017698 3017701 TTCCTTTTTTATCTG CCG-CCGGGCCGCTG CAA TGGCGGCCCGCACCG TTTTTTTGGCCGTAC TERM 4771 3017976 - 3018002 + g 71 -7.9 -4.02051 | gap 1, overlap 3017978 GCGTTCAGGTAGCCC CG-GGCCGCGGC CTGC GCCATGGCCTCG TTGTTTACCTTCATG TERM 4772 3018191 - 3018206 + g 100 -4.6 -5.93809 | opp_overlap 3018166 CTTGCCCCGGACCAG CTCCGG CACG TCGGGG TTTTTTTTCTGGGGC TERM 4773 3018328 - 3018318 - G 75 -5.4 -4.58395 | overlap 3018320 GCCAGCCGGGAAAAA TGCA TCA TGCA GATGGCGGCGGAAGC TERM 4774 3018740 - 3018704 - G 100 -15.2 -3.85698 | gap 1, opp_overlap 3018715 CCGGTCCCGCAGAAA CAGCCGC-ACATCCAGG GCCA CCTGGTCGTTGCGGCTG CGGGCCGTGTGCAGC TERM 4775 3019267 - 3019303 + r 84 -13.2 -2.55544 | opp_overlap 3019271 3019287, overlap 3019262 3019271 CATTGCGAGCGCCAG CGAAGCAATCTTGTTC ATAAC GAAGGAGATTGCTTCG TCGCTTCGCTCCTCG Dole_2491 3020576 - 3019377 - | argininosuccinate synthase TERM 4776 3020677 - 3020640 - R 87 -14.3 -2.55544 | opp_overlap 3020644 3020648, overlap 3020644 CGAGGAGCGAAGTGA CGAAGCAATCTTCTTCG CATC CGGACAAGATTGCTTCG CTGGCGCTCGCAATG TERM 4777 3020644 - 3020673 + r 72 -10.1 -3.06183 | opp_overlap 3020644 3020640, overlap 3020648 GAGCGAAGTGACGAA GCAATCTTCTTCG CATC CGGACAAGATTGC TTCGCTGGCGCTCGC Dole_2492 3021655 - 3020738 - | ornithine carbamoyltransferase Dole_2493 3022879 - 3021686 - | acetylornithine and succinylornithine aminotransferase TERM 4778 3022303 - 3022269 - G 81 -12.1 -3.65991 | gap 1 ACCGCCTCAAGATAA CCGGGCGACGGGCAGA CCAC CCCGCCC-TCGCCCTG GATGGGCTCCATCAT TERM 4779 3022325 - 3022346 + g 70 -3.7 -4.57569 | gap 1 CTCCATCATCACGGC GCAGAT-CCG CGG CGACATCTGC TTTTTCAACGCGTCG Dole_2494 3023892 - 3023017 - | acetylglutamate kinase TERM 4780 3023397 - 3023380 - G 71 -6.9 -4.18934 | overlap 3023381 GATCACCGGAATAAA GCCCTGG GAGG CCAGGGT GGTAATAATATCCGG Dole_2495 3025323 - 3023953 - | ATP-dependent protease ATP-binding subunit TERM 4781 3024948 - 3024958 + g 71 -8.2 -4.07568 | opp_overlap 3024933 TCCGCTCTTCTGCCA GGCG GAC CGCC TTTTCCCGCACCGCC Dole_2496 3025915 - 3025358 - | ATP-dependent protease peptidase subunit TERM 4782 3025407 - 3025426 + g 74 -7.8 -4.13767 | opp_overlap 3025403 TAAACGCAAATGGCG GCGGCAAT GGCC ATGGCCGC TTTTGCGATGCCGGC Dole_2497 3026822 - 3025896 - | integrase family protein TERM 4783 3026140 - 3026171 + g 71 -11.6 -3.25942 | opp_overlap 3026128, overlap 3026128 3026141 GAACGGGTGGTCAGC CGCCCCCGGTTTTT GTTC AAAAACAGGGGGCC TTCCTCTACGCCGAT TERM 4784 3026141 - 3026170 + g 81 -15.1 -2.55351 | opp_overlap 3026128, overlap 3026128 3026140 AACGGGTGGTCAGCC GCCCCCGGTTTTT GTTC AAAAACAGGGGGC CTTCCTCTACGCCGA TERM 4785 3026405 - 3026437 + g 70 -12.2 -2.78384 | GCAGGTCCAGCAGCG TGTCTCCGG-TGCTGG CGT CCAGCAGCCGGA-ACA TGTCGTCCACGGAGA Dole_2498 3027243 - 3026854 - | hypothetical protein TERM 4786 3026946 - 3026961 + g 77 -2.4 -5.15969 | overlap 3026945 CATCATCAGCGCCCA GGGCCG CGGC CCGCTC TTTTTTCAATTCGCG TERM 4787 3027184 - 3027196 + g 73 -3.3 -4.77165 | overlap 3027172 3027180 GCTCTCCTGGGCCGG GGCTT CAG GGGCC TTTTCTTCTGCCCCG Dole_2499 3028182 - 3027448 - | 1-acylglycerol-3-phosphate O-acyltransferase TERM 4788 3027750 - 3027736 - G 84 -4.2 -5.27335 | opp_overlap 3027746 TTCGGGAAAGAAAAA CACGGA ACT TCCCTG GTTCAAGGCTTTTTC Dole_2500 3029398 - 3028256 - | acyl-CoA dehydrogenase domain-containing protein TERM 4789 3028590 - 3028572 - G 75 -8.8 -4.09739 | opp_overlap 3028580, overlap 3028573 CGAAGCCCCTGAAAA CCGGACAG GTT CTGCCCGA ACTGCTTTCTGTTTC TERM 4790 3029607 - 3029589 - H 85 -9.6 -4.3739 | opp_overlap 3029589 CACCCCGGCACAAAA TAGGACGG TTA CCATCCTA TTTGACATCAAACCT Dole_2501 3030033 - 3031760 + | aldehyde ferredoxin oxidoreductase TERM 4791 3031796 - 3031781 - f 73 -4.6 -4.74132 | overlap 3031783 ACATTTCATGAAAAA TACGGG CTAG CCCGAA GGGTGAGATATACGG TERM 4792 3031794 - 3031783 - f 71 -7.2 -3.98658 | overlap 3031781 ATTTCATGAAAAATA CGGG CTAG CCCG AAGGGTGAGATATAC TERM 4793 3031837 - 3031820 - f 87 -6.3 -5.04385 | TATACGGGCAAAAAA GTCGTTG ATGA CAACAAC ACATTCATGATGATG Dole_2502 3031914 - 3032243 + | thiamineS protein Dole_2503 3032233 - 3032472 + | thiamineS protein TERM 4794 3032893 - 3032865 - g 81 -3.8 -5.04249 | CTGGGAAAAAATAAA GCCCTTGC-CGCTG CCG CAGCATGCC-GGGC CATAAATCCGGCCGT Dole_2504 3032472 - 3033329 + | UBA/THIF-type NAD/FAD binding protein TERM 4795 3033519 - 3033529 + F 91 -2.4 -5.9873 | CGCCGCACCCCAGTG CGGC ATG GACG TTTTTTTTGTCATGA TERM 4796 3034673 - 3034663 - g 79 -5.4 -4.74801 | TAAGTGTATTAAAAA CTGT TAT ACAG CAGGGCATTAAAGGG Dole_2505 3033723 - 3034718 + | hypothetical protein TERM 4797 3034791 - 3034758 - f 100 -15.3 -4.73682 | gap 1, opp_overlap 3034753 3034758 CTGCAGAACATAAAA CGCCGCCCCGGCCCCT TAA AAAAGCCGGGG-GGCG TTCGGTTGTCCTCAT TERM 4798 3034758 - 3034791 + F 73 -10.3 -3.2534 | gap 1, opp_overlap 3034758, overlap 3034753 CTGCAGAACATAAAA CGCCGCCCCGGC CCCTTAAAAAA GCCGGGG-GGCG TTCGGTTGTCCTCAT TERM 4799 3034935 - 3034898 - f 80 -4.7 -5.03409 | gap 1, overlap 3034899 3034900 CCACAAAAAAAACAA CCGCACACACCCGGGAGC GCC GCACCCCAGTGCG-GCAA AACAACGACCGGCCC TERM 4800 3034964 - 3034988 + F 80 -2.7 -5.52384 | opp_overlap 3034967, overlap 3034965 CCTGCACGTCAAAAA ACTTTCATGCC ACC GGCATGGGCGC TTTTTTTCATGAACC TERM 4801 3035095 - 3035082 - f 75 -5.9 -4.58395 | GGCATCGTGGAAAAA GCGGA GTGA CCCGC GCAGGAGAGGGAGAT Dole_2506 3035321 - 3036562 + | serine/threonine protein kinase TERM 4802 3037528 - 3037489 - f 100 -17.2 -3.05596 | overlap 3037491 GAGGCCTCTACCCAA CACGGGTGACACGGGCAA CTTA TTGCCGGTGCCACCCACG GATATAAGTATCATG TERM 4803 3037526 - 3037491 - f 100 -16.2 -3.08679 | overlap 3037489 GGCCTCTACCCAACA CGGGTGACACGGGCAA CTTA TTGCCGGTGCCACCCA CGGATATAAGTATCA Dole_2507 3037742 - 3038533 + | hypothetical protein TERM 4804 3038960 - 3038950 - g 88 -5.4 -5.24449 | opp_overlap 3038950 CAGAAACTTAAAAAA TCAG ATG CTGA TATTCGACAGCGGGG TERM 4805 3039029 - 3039050 + G 76 -12.9 -3.03338 | TGCATCATGTGGGCG CGGGGCCGG GGGG CCGGCCCGG TGTTGAAAAAATTCT Dole_2508 3038704 - 3039114 + | hypothetical protein TERM 4806 3039188 - 3039203 + T 73 -3.2 -4.87892 | GATACCGATCCCGAT CCCGAT TTTG ATCTGG TTTGTTTTGTTACAG Dole_2509 3039896 - 3039213 - | uracil-DNA glycosylase superfamily protein TERM 4807 3040308 - 3040285 - g 70 -2.4 -4.78848 | gap 1, overlap 3040289 3040290 CGTTCAAACAGAAAA TGA-ACCAGGC CCT GCCCGATGCCA ACGATCCCCTGCTGG TERM 4808 3040428 - 3040446 + G 71 -10.2 -3.53444 | opp_overlap 3040409 3040406, overlap 3040441 GCCGGTGAAGGGTGC GCCTGCCC CAT GGGCATGC TTTCCAAGAACGTGC Dole_2510 3040080 - 3040853 + | cobyrinic acid ac-diamide synthase TERM 4809 3041226 - 3041237 + G 74 -7.2 -4.3739 | overlap 3041223 3041222 GCATTTCCGACTGCC GGGC CGCG GCCC TTTTGTCCGGCGGTA TERM 4810 3042075 - 3042063 - g 78 -9.1 -4.21936 | overlap 3042064 TTGATAATCCCAAAA CCCTG GCC CAGGG CCCGGTGGCGGGTAT TERM 4811 3042293 - 3042308 + G 71 -10.4 -3.53224 | opp_overlap 3042292 3042293 GCCATTGTTTTAAAT GCCGCT GTTG AGCGGC TTTACGGCACAGGTC TERM 4812 3042564 - 3042511 - g 75 -12.3 -3.28712 | gap 1 CGTTCCGCCCTACAA GACAGCCGA-CGCCGCCGGTCAGCGG GGC CTGCTGGCCGACGGTGATCCGCTCTC CGACATGGACGCGGC Dole_2511 3040847 - 3042865 + | electron transport complex, RnfABCDGE type, B subunit TERM 4813 3042880 - 3042868 - f 71 -6.9 -4.24948 | CCAGCACATGTAAAA CAGCG CAA CGCCG CAAACAGCGGCAAAA Dole_2512 3042906 - 3043364 + | positive regulator of sigma E, RseC/MucC Dole_2513 3044453 - 3043377 - | lysine 2,3-aminomutase YodO family protein TERM 4814 3043491 - 3043455 - G 71 -12.1 -2.97747 | GCTGGAGACCACATA GTCGGGCAGCAGGGGAA CCT TGCCCCCGCCGCCGGGC AGGTCGATCACATAG TERM 4815 3044079 - 3044056 - G 75 -11.7 -3.17723 | gap 1 TCATCGGTAAGGGAA GCGGC-GGCC CTGCC GGCCAGCCGC TTGCGAAAGCAGAAC TERM 4816 3044988 - 3044961 - g 88 -13.4 -3.63968 | overlap 3044953 TGGGAAACCGTCAAA CAGATGCCGGCG TCCA CCCCGGCATCCG AGGCCATGAGCGCGG Dole_2514 3044559 - 3045149 + | DNA-3-methyladenine glycosylase I Dole_2515 3045146 - 3046423 + | glycosyl transferase group 1 TERM 4817 3046673 - 3046660 - g 75 -5.9 -4.56775 | ACGTGGCGCCAAAAA GCGAG CTGG CCCGC AAACTTGAGGTGAAC TERM 4818 3047557 - 3047547 - g 80 -2.4 -5.22039 | opp_overlap 3047547 3047547, overlap 3047548 3047549 GCCAAACGCAAAAAA GCGG CCC CCGG CTTCTGCCGGGCCAT TERM 4819 3047819 - 3047807 - g 72 -9.1 -3.85698 | GGTGCTGGCCATAAA GGCCA TGC TGGCC GGAAAGGAAGCGGTG TERM 4820 3047867 - 3047889 + G 71 -11.2 -3.28712 | TGAGGTGGACGCGGG CATCGGCGGT GAG GCCGCCGAGG TTGTGGGAAAGAAGC Dole_2516 3046440 - 3048158 + | DNA repair protein RecN TERM 4821 3048174 - 3048188 + T 81 -12.8 -2.77167 | opp_overlap 3048133, overlap 3048165 TTTTTGCCGGTCCGT GCCGGG CGC CCCGGC TCCTTCCCGTTATTG Dole_2517 3049271 - 3048489 - | phosphomethylpyrimidine kinase Dole_2518 3049942 - 3049349 - | metal-binding protein-like protein TERM 4822 3049498 - 3049516 + g 72 -4.4 -4.56597 | AAGGCCGGGCATACT GGGGATAG CGG CACTCCCC TTTTTGCAACAGCGG Dole_2519 3050349 - 3049939 - | hypothetical protein TERM 4823 3050023 - 3049972 - G 74 -2.2 -5.0095 | gap 1, overlap 3049977 AAAAACATAAGAAAA GGGAATGGCGATCA-GGTCGCCGAC AAT GTAGCTGACCATGATCACGATCACC AGCCCGGCATAATCC TERM 4824 3050409 - 3050391 - R 83 -6.6 -4.89477 | opp_overlap 3050392 3050393, overlap 3050393 GTTTTAACAACAAAA GGCGGCGT GGC ACATCGCC GATTTCTCAAGTCTT Dole_2520 3051202 - 3050504 - | endonuclease/exonuclease/phosphatase TERM 4825 3050709 - 3050678 - G 100 -8.6 -5.04987 | gap 1 AATATGGTCAAAAAA CCGGCGCGCCTGCCG CAA CGA-ACGCGCCCCGG CAATCCACTCATTCA Dole_2521 3053360 - 3051216 - | phospholipase D TERM 4826 3053713 - 3053731 + H 100 -16 -3.06815 | GGGCGAGTCGCCTTG GTCCCGCC ATC GGCGGGAC TGTGTTGCGGGACAT TERM 4827 3053931 - 3053941 + G 70 -4 -4.62783 | opp_overlap 3053931 AAAGGAGGCCGAATA TGTA CAA TACA TTTTTACCGTCACTG TERM 4828 3054069 - 3054056 - g 83 -8.1 -4.56597 | opp_overlap 3054057 GTGTTTTCCGAAAAA GGGGA GTGG TCCCC TGCCATTGATGTTTC TERM 4829 3054229 - 3054215 - g 84 -7.2 -4.85129 | ACCAGAGAGGAAAAA GAGAAT TAC ATTCTC ACGGAAAGCCGCTGC Dole_2522 3053930 - 3054382 + | heat shock protein Hsp20 TERM 4830 3054399 - 3054444 + F 100 -12.8 -5.40072 | opp_overlap 3054410, overlap 3054410 AACGGCATTGATGCC GATTGAAAAAAGCAGGGAAG CAGAGC CTTCCCTGCTTTTTTTATGC TTTTTTTGAAGAAAC TERM 4831 3054433 - 3054410 - f 100 -12.5 -5.08824 | opp_overlap 3054399 3054410 TGCCGATTGAAAAAA GCAGGGAAG CAGAGC CTTCCCTGC TTTTTTTATGCTTTT TERM 4832 3054410 - 3054433 + F 100 -12.5 -5.77632 | opp_overlap 3054410, overlap 3054399 TGCCGATTGAAAAAA GCAGGGAAG CAGAGC CTTCCCTGC TTTTTTTATGCTTTT TERM 4833 3055342 - 3055366 + G 84 -7 -4.72846 | overlap 3055343 GGTGGCGGCCCACCG CCGGGGGGTG GCCTA CACCCGCCGC TTTTTCGGTGTATCC Dole_2523 3054554 - 3055876 + | hypothetical protein TERM 4834 3057067 - 3057047 - g 88 -10.5 -4.52589 | overlap 3057058 3057060 TCCGCCGACAGAAAA CAGCAGAAA AAG TTCCTGCTG ACCCTGCTGGACCGG TERM 4835 3057080 - 3057058 - g 76 -3.2 -5.02201 | overlap 3057047 3057060 AAAACAGCAGAAAAA GTTCCTGCTG ACC CTGCTGGACC GGCCCCTTCGCGTAT TERM 4836 3057126 - 3057136 + G 87 -8.2 -4.72272 | opp_overlap 3057113 3057114, overlap 3057115 3057133 ACGTGGGCGAACCCG GGGG TGG CCCC TTTTTCGTGCGAACA Dole_2524 3055916 - 3057514 + | hypothetical protein TERM 4837 3057942 - 3057918 - g 71 -11.3 -3.21276 | overlap 3057916 GCTGGCCGGAGAACA GGCGGTGCTGG AGA CCGGCAGCGCC AACACCGTGGTGCGC TERM 4838 3058015 - 3058001 - g 75 -5.6 -4.61527 | overlap 3058004 AAAACTTTTTAAAAA CCATGC TGG GCCTGG CCCTGAAAAATCCCT Dole_2525 3057514 - 3058410 + | dTDP-4-dehydrorhamnose reductase TERM 4839 3058667 - 3058643 - f 70 -10 -3.17714 | overlap 3058646 GCAAATCTCGAGGAA TGAGGCGTAC TTGTC GTACGCCGCA GTGACGAGGGGTGCA TERM 4840 3058664 - 3058646 - f 71 -10.3 -2.78395 | overlap 3058643 AATCTCGAGGAATGA GGCGTAC TTGTC GTACGCC GCAGTGACGAGGGGT TERM 4841 3059385 - 3059372 - g 78 -9.5 -4.09685 | CGCCATCTGCGAAAA CGGCC CGCA GGCCG TTCGCCACGCCCTGG Dole_2526 3058653 - 3059549 + | enoyl-CoA hydratase/isomerase Dole_2527 3061179 - 3059725 - | hypothetical protein TERM 4842 3059800 - 3059854 + g 75 -11.8 -3.21099 | CACGTCGATCCGAAG CTCGTGCTGGGTGTCGCCGGGATGGC GGG GCCGGCCCGGCCAGGCCCGGGCCGCG TTCATGATGCCGCCG TERM 4843 3060263 - 3060276 + g 79 -5.9 -4.74103 | AGGTAGGTGTTAGCG GTGGC CCGG GCCGC TTTTTCAATTACCGG TERM 4844 3060790 - 3060806 + g 88 -11.5 -4.11216 | opp_overlap 3060788 CATATAGCCAAAGTT GCCGGCG GCT CGCTGGC TTTTCAGCATGAAAC Dole_2528 3061865 - 3061251 - | hypothetical protein TERM 4845 3061533 - 3061523 - G 80 -2.4 -5.19879 | CGTGAAAGACAAAAA GGTC CCC GCCC ATGAGCTTTTTCAGC TERM 4846 3062440 - 3062425 - g 70 -3.9 -4.56597 | CCGGCTGCTCAAAAA CCCGA CATCCC CCGGG CCACGGTTTCCCGGC Dole_2529 3062099 - 3062692 + | hypothetical protein TERM 4847 3062851 - 3062812 - g 75 -5.5 -4.56597 | gap 1, opp_overlap 3062839 3062842 3062842, overlap 3062813 GGTTTCTGTTAAAAA TCGTCGG-CCTGGCCAGG GCAGA CCAGGCCAGGGCCGGGGC GGTATGGCGGTACCG TERM 4848 3062842 - 3062896 + G 100 -12.1 -4.59069 | opp_overlap 3062813 3062812, overlap 3062839 3062842 GGGCAGACCAGGCCA GGG-CCGGGGCGGTATGGCGGTACCGG CTG CTGGTGCTGTCC-GCCGTCCTGGTCCC TTTTCTCATTGTGAT TERM 4849 3062842 - 3062895 + G 87 -14.5 -3.34357 | gap 1, opp_overlap 3062813 3062812, overlap 3062839 3062842 GGGCAGACCAGGCCA GGGCCGGGGCGGTATGGCGGTACCGG CTG CTGGTGCTGTCC-GCCGTCCTGGTCC CTTTTCTCATTGTGA Dole_2530 3062673 - 3063050 + | hypothetical protein TERM 4850 3063332 - 3063380 + G 70 -5.1 -4.41348 | gap 1, opp_overlap 3063323 3063324, overlap 3063324 3063334 ACCAAAGCCCATCGC CCTGATCGCCCTGGGCGGCGGC ATTCTG GCCGGGGGCCTGGGC-ATCATG TTTCTTTACACGGGC TERM 4851 3063521 - 3063551 + G 70 -3.8 -4.56597 | overlap 3063523 GACCGTGGGCATCGT GCTGTGTGTGGCCG GTG CGGCCATGGTCACC TTTTTCAAACAGGGA Dole_2531 3063132 - 3063569 + | hypothetical protein Dole_2532 3063635 - 3064585 + | hypothetical protein TERM 4852 3064937 - 3064893 - f 78 -7.8 -4.34008 | gap 1, opp_overlap 3064898, overlap 3064897 GATCAAGGAAAACAA GGAATTCCGCG-GAGGCGTAC TGTT GTACGCCGCACAAGGAAGCCC GCAGTTTGACGCAGA Dole_2533 3065107 - 3066510 + | glutamyl-tRNA synthetase TERM 4853 3066662 - 3066635 - T 100 -17.8 -4.41817 | gap 1, opp_overlap 3066635 CAAAACAACGCAAAA CGGAGCCG-CCTC CAT GAGGGCGGCTCCG TTTTTGTTTTCAGGC TERM 4854 3066635 - 3066662 + T 100 -17.8 -5.45802 | gap 1, opp_overlap 3066635 CAAAACAACGCAAAA CGGAGCCG-CCTC CAT GAGGGCGGCTCCG TTTTTGTTTTCAGGC Dole_2534 3069327 - 3066913 - | 1A family penicillin-binding protein TERM 4855 3068963 - 3068974 + g 70 -2.2 -4.7497 | gap 1, opp_overlap 3068958, overlap 3068963 CCCTGAACAATGGCA CC-GG CCT CCAGG TTTTTCATGAATGCC Dole_2535 3070991 - 3069486 - | amidase TERM 4856 3069605 - 3069585 - G 71 -10.4 -3.53012 | overlap 3069570 3069597 GTCCTCGCGGCCAAA GGGCGCCA CGAAC TGGCACCC GCAGGGCAGCCCGTC TERM 4857 3070830 - 3070806 - G 79 -13.6 -3.09635 | gap 1, opp_overlap 3070807, overlap 3070792 3070809 AGGGCCATCAGGCAA GGACCCGGCAG CGGC CTGCCGGG-CC TTGTCAAACATGGCG TERM 4858 3070807 - 3070830 + g 82 -13.8 -3.30124 | opp_overlap 3070792 3070806 3070809 GGGCCATCAGGCAAG GACCCGGCAG CGGC CTGCCGGGCC TTGTCAAACATGGCG TERM 4859 3070828 - 3070809 - G 83 -15 -2.76263 | opp_overlap 3070807, overlap 3070792 3070806 GCCATCAGGCAAGGA CCCGGCAG CGGC CTGCCGGG CCTTGTCAAACATGG TERM 4860 3071293 - 3071281 - g 76 -4.7 -4.72272 | CGTTGCCATGAAAAA GGGGC TCG GCCTC AACATCACCGGCCAA TERM 4861 3071626 - 3071611 - g 71 -7.5 -4.18494 | CAGCGCCATGCAAAA GGCGG GCCTGA CCGCC CTGATGATGAAGGCC TERM 4862 3071637 - 3071653 + G 75 -5.7 -4.57341 | opp_overlap 3071638, overlap 3071638 CCGCCCTGATGATGA AGGCCGG GCT CTGGCCG TTTTTGCGCGCCCTT TERM 4863 3072038 - 3072024 - g 71 -7.1 -4.11484 | GCGAATTTCTTAAAA CCGGA TGCTT TCCGG TTCACCGGGTGGTGG Dole_2536 3071258 - 3072598 + | Na(+)-translocating NADH-quinone reductase subunit A TERM 4864 3072597 - 3072613 + G 70 -2.1 -4.8622 | overlap 3072600 AAACAACGGCCCCAT GAAAGCG ATC CGCGTCC TTTTTGATTCCCAGC TERM 4865 3073122 - 3073140 + G 76 -7.3 -4.55887 | overlap 3073119 3073118 3073128 CAATATTTTTAATCC GGCCCTG ACCGG CCGGGCC TTTCTCTTTTTCGCC Dole_2537 3072595 - 3073776 + | Na(+)-translocating NADH-quinone reductase subunit B TERM 4866 3073826 - 3073850 + F 70 -10 -3.17714 | overlap 3073829 TGCATCCCTCGTCAC TGCGGCGTAC GACAA GTACGCCTCA TTCCTCGAGATTTGC TERM 4867 3073829 - 3073847 + F 71 -10.3 -2.78395 | overlap 3073826 ATCCCTCGTCACTGC GGCGTAC GACAA GTACGCC TCATTCCTCGAGATT Dole_2538 3073927 - 3074670 + | NADH:ubiquinone oxidoreductase, subunit C TERM 4868 3075251 - 3075263 + G 72 -6.2 -4.35483 | overlap 3075245 CGGTTTCATGCTGCT GGCG CCGGC CGCC TTTATTATCATCGGC Dole_2539 3074700 - 3075317 + | NADH:ubiquinone oxidoreductase, subunit D Dole_2540 3075319 - 3075927 + | NADH:ubiquinone oxidoreductase, subunit E TERM 4869 3076182 - 3076209 + G 75 -9.8 -3.91144 | overlap 3076184 3076186 GGTGGGCGGTACCCT GCTGTCGGCCCT GGCC GGGGCCGATATC TTTCTGCCGTCTGCC TERM 4870 3076184 - 3076207 + G 74 -11 -3.54447 | overlap 3076182 3076186 TGGGCGGTACCCTGC TGTCGGCCCT GGCC GGGGCCGATA TCTTTCTGCCGTCTG TERM 4871 3076186 - 3076205 + G 73 -11.4 -3.34244 | overlap 3076184 3076182 GGCGGTACCCTGCTG TCGGCCCT GGCC GGGGCCGA TATCTTTCTGCCGTC TERM 4872 3076789 - 3076777 - g 75 -10.5 -3.66178 | GTGTTCAACCTGAAA CCCGG CGA CCGGG TGACCTTAAGCGGCC Dole_2541 3076021 - 3077241 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 4873 3077446 - 3077422 - f 70 -10 -3.17714 | overlap 3077425 GCAAATTCCGAGGAA TGAGGCGTAC TTGTC GTACGCCGCA GTGACGAGTGAATGC TERM 4874 3077443 - 3077425 - f 71 -10.3 -2.78395 | overlap 3077422 AATTCCGAGGAATGA GGCGTAC TTGTC GTACGCC GCAGTGACGAGTGAA Dole_2542 3077521 - 3077961 + | hypothetical protein TERM 4875 3078134 - 3078152 + G 76 -4.4 -4.81083 | CTACACCGCCGGAAC CCTCAGCC CGG GCCTGTGG TTTTTCCTGCTTAAC TERM 4876 3078614 - 3078599 - g 74 -2.4 -4.88736 | overlap 3078600 CATCAGCGACAAAAA CCCCGC CATT GCCAGG CGTCTGCAGGAAGAC Dole_2543 3077958 - 3078830 + | hypothetical protein Dole_2544 3079075 - 3079695 + | TetR family transcriptional regulator TERM 4877 3080762 - 3080749 - g 70 -3.7 -4.63218 | GGCGTTTGAAGAAAA CGAGG ACCC CCGCG TCAAGGGAATGGCGG Dole_2545 3079772 - 3080899 + | HEAT repeat-containing PBS lyase TERM 4878 3081622 - 3081611 - g 74 -7.2 -4.30576 | CGTCTACCAGGAAAA CCGG ATCA CCGG CTACAGCCGGGACAT Dole_2546 3081108 - 3081770 + | hypothetical protein TERM 4879 3082402 - 3082392 - g 76 -6.8 -4.45544 | TCCCACCAATGAAAA CGCT TAC AGCG ATGCGGTTGCCCGCA TERM 4880 3083156 - 3083140 - g 79 -5.7 -4.74012 | overlap 3083141 ACCACAAAAGTAAAA GCGGCCC TGG AGGCCGT GCCCCTGGTGGTGAG TERM 4881 3083748 - 3083721 - g 90 -12 -4.12942 | gap 1, opp_overlap 3083711, overlap 3083711 3083722 GGAAACCGCCCAAAA GGCCGGTCTTGCC GAC GGCAAGGCCG-CC GTGGTGGAAACACCG TERM 4882 3083748 - 3083722 - g 73 -12.2 -3.07283 | opp_overlap 3083711, overlap 3083711 3083721 GAAACCGCCCAAAAG GCCGGTCTTGCC GAC GGCAAGGCCGCC GTGGTGGAAACACCG Dole_2547 3081835 - 3083970 + | molybdopterin oxidoreductase Dole_2548 3083990 - 3084808 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4883 3084831 - 3084818 - f 100 -9.5 -5.58179 | CATTAGAACAAAAAA CCCGC GCTG GCGGG TGTGGATATAAACCA TERM 4884 3085063 - 3085090 + G 83 -7.6 -4.61527 | gap 1 GATATGGGCCGACCT GGCGGTGATCGCC CTG GGCGG-CGGCGCC TTTTTCACGGGTTTT TERM 4885 3085416 - 3085428 + G 72 -4.7 -4.6391 | opp_overlap 3085404, overlap 3085415 3085417 TCATGGCCGTGTTTG CCGCC ACC GGCGC TTTTCTGTCCTTCTT Dole_2549 3084875 - 3086107 + | polysulphide reductase NrfD Dole_2550 3086142 - 3086309 + | hypothetical protein TERM 4886 3086331 - 3086362 + F 100 -13.1 -5.94743 | gap 2, opp_overlap 3086331 CCGGCACATCAAAAA GCGCCTG-T-CCCGG CATA CCGGGAAGCAGGCGC TTTTTGTTTTTTTTC TERM 4887 3086362 - 3086331 - f 100 -13.1 -4.8048 | gap 2, opp_overlap 3086331 CCGGCACATCAAAAA GCGCCTG-T-CCCGG CATA CCGGGAAGCAGGCGC TTTTTGTTTTTTTTC Dole_2551 3086565 - 3087818 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Dole_2552 3088593 - 3087898 - | SNARE associated Golgi protein TERM 4888 3088168 - 3088158 - G 74 -2.4 -4.95854 | CAAAAAACGGAAAAA CCGG AAC CAGG CGCAGTGTGAACAGA TERM 4889 3088208 - 3088220 + g 75 -9.1 -4.08216 | opp_overlap 3088189 CCGTCTTTTTCAATG CCGTG GTT CACGG TTTTCAGCCGGCTGC TERM 4890 3088281 - 3088270 - G 75 -3.6 -4.7254 | ATCCTTCAGCAAAAA CCGG GCCG CCAG AAACGCCAGGGTCGC TERM 4891 3088392 - 3088350 - G 82 -10 -4.21936 | gap 3 TCCAGAACCCGAAAA TCGCTCCGCCGGC-CAG-GGT CATG ACCGCCGCGCCGG-GAAGCGA CAACGCCGCCACAAG TERM 4892 3088768 - 3088753 - R 77 -10.4 -3.53444 | TCAGGCGTCTTGAAA GTGCCC TTAC GGGCAC ACTACAAACGGGTCA TERM 4893 3088788 - 3088777 - R 71 -7.2 -4.0162 | CGGGCACACTACAAA CGGG TCAA CCCG GCATGACGGGGCCGC TERM 4894 3088854 - 3088842 - R 74 -6.9 -4.46212 | overlap 3088844 3088845 CGCGTTATCATAAAA GACCC GCC GGGCC AGGCCGGCATCGGAC TERM 4895 3088880 - 3088844 - R 70 -7.8 -3.84183 | gap 1, opp_overlap 3088870, overlap 3088842 3088845 CGTTATCATAAAAGA CCCGCCGGGCCAGGCCG GCAT CGGACCGG-CAGGCGGC CTTGACGATTTTAAT TERM 4896 3088879 - 3088845 - R 74 -11.3 -2.90028 | gap 1, opp_overlap 3088870, overlap 3088842 3088844 GTTATCATAAAAGAC CCGCCGGGCCAGGCCG GCAT CGGACCGG-CAGGCGG CCTTGACGATTTTAA TERM 4897 3088977 - 3088987 + r 77 -8.2 -4.2748 | opp_overlap 3088973, overlap 3088973 TATGGGCAAAAGCGC GGGG ACG CCCC TATTTTTTCTCAATG TERM 4898 3089004 - 3089029 + r 76 -8.2 -4.07568 | gap 1, overlap 3089005 ATTTTTTCTCAATGG TGCCGCCG-GC CCGCT GCACGGCGGCC TTTTCAAACGACGCC TERM 4899 3089005 - 3089028 + r 78 -11.7 -3.04398 | gap 1, overlap 3089004 TTTTTTCTCAATGGT GCCGCCG-GC CCGCT GCACGGCGGC CTTTTCAAACGACGC Dole_2553 3089796 - 3088987 - | hypothetical protein TERM 4900 3089465 - 3089447 - G 70 -12.4 -2.84504 | opp_overlap 3089447 3089459 3089461 3089461, overlap 3089442 AGCGCGTAAAGATGA CGGCCGAA CTT TCCGGCCG TTTCCCGGTCCTTTG TERM 4901 3089447 - 3089465 + g 71 -10.2 -3.6003 | opp_overlap 3089442 3089447, overlap 3089459 3089461 3089461 AGCGCGTAAAGATGA CGGCCGAA CTT TCCGGCCG TTTCCCGGTCCTTTG Dole_2554 3090023 - 3090880 + | short-chain dehydrogenase/reductase SDR TERM 4902 3091585 - 3091558 - g 100 -12 -4.82901 | gap 1 TGCCGCCTACAAAAA GCGGTTCCGCGGT GAA ACCGCGGA-CTGC ATGCTGGCCGAAGAC Dole_2555 3090932 - 3091678 + | enoyl-CoA hydratase/isomerase TERM 4903 3092642 - 3092614 - g 74 -8.1 -4.20868 | overlap 3092636 CCTTGAAAACAAGAA CCGGATTTTCCGC AAG ACCGAAGATCCGG TGATCACCTATGCGG Dole_2556 3091694 - 3092665 + | beta-lactamase domain-containing protein TERM 4904 3092806 - 3092832 + F 71 -8.7 -3.74693 | gap 1 TAGATAAAAACTGCT CCCGCCCGTGAT GTAT ATC-CGGGCCGG TTTGGTAAGATGACC TERM 4905 3093479 - 3093489 + G 71 -6.8 -4.18018 | GACCTGATCGCCGAA TCCG CCC CGGA TTTTGAATGGCCCCA TERM 4906 3093910 - 3093863 - g 100 -11 -5.24129 | opp_overlap 3093872, overlap 3093865 GGCCTGGACAAAAAA CCGGACCTTGCCGGCGCCCGCC TGCT GTCCGGCGCCAGCGAGCCCCCG GTGGCCATGATGAAA TERM 4907 3093908 - 3093865 - g 70 -12.2 -2.83915 | opp_overlap 3093872, overlap 3093863 CCTGGACAAAAAACC GGACCTTGCCGGCGCCCGCC TGCT GTCCGGCGCCAGCGAGCCCC CGGTGGCCATGATGA TERM 4908 3094075 - 3094063 - g 87 -7.7 -4.74103 | GTGGGAACTGAAAAA GAAGC AGG GCTTC ACCGTGGTAGGGCTG Dole_2557 3092957 - 3094624 + | AMP-dependent synthetase and ligase TERM 4909 3094753 - 3094725 - g 100 -23.3 -4.64657 | GGAAACGTTTAAAAA CCTGGATGCCGAC GTG GTCGGCATCCAGG AGACCAAACTCCAGG TERM 4910 3094860 - 3094843 - g 89 -2.6 -5.67063 | opp_overlap 3094849 3094850 GCCACGACAAAAAAA GGCTAC AGCGGG GTGGCC GCCTTTTCCCGGATG Dole_2558 3094636 - 3095424 + | exodeoxyribonuclease III Dole_2560 3096820 - 3096266 - | hypothetical protein Dole_2561 3097590 - 3097036 - | hypothetical protein TERM 4911 3098477 - 3098507 + r 70 -7.6 -3.90086 | overlap 3098479 ACCCCATTTTTTCGG AATTGGAGGTGCCA AAT TAGCATCTCCAATC TTTCAATTCTTCTTT TERM 4912 3098479 - 3098505 + r 77 -10.2 -3.51556 | overlap 3098477 CCCATTTTTTCGGAA TTGGAGGTGCCA AAT TAGCATCTCCAA TCTTTCAATTCTTCT Dole_2562 3098699 - 3098493 - | hypothetical protein Dole_2563 3099905 - 3098991 - | hypothetical protein Dole_2564 3100592 - 3100242 - | XRE family plasmid maintenance system antidote protein Dole_2565 3101308 - 3100688 - | hypothetical protein TERM 4913 3101317 - 3101292 - G 70 -4.7 -4.44797 | overlap 3101294 TTATTAACATCAAAA TCCGCCCTTGT TTCC ATAAGAGCGAA ACCCAGGCGGTTTAA TERM 4914 3101662 - 3101642 - R 84 -12.6 -3.14132 | GTGGTTGTCCATCAA GGGCGAAC ACAAG GTTCGCCC CTACCGTATATCCGC Dole_2566 3102994 - 3101714 - | radical SAM domain-containing protein TERM 4915 3102305 - 3102284 - G 71 -7.2 -4.20074 | AAAGAGATGGGAAAA GCCGGCCT GTCTGT AGGCCGCC AGGGTATCAATTACC TERM 4916 3102530 - 3102564 + g 77 -2 -5.093 | opp_overlap 3102544, overlap 3102540 AGCCGCGGGTTTGCG GCCCGGCAGGTA AAGGCCGGGGA TGGCAGCCGGGC TTTTATTGTTTTCAA TERM 4917 3102702 - 3102713 + g 70 -3.6 -4.56597 | CCAAGCACGATGGGG GCGG ATGT CTGC TTTTTGCAGGCGGCG TERM 4918 3103107 - 3103071 - R 75 -11.6 -2.72829 | gap 1, opp_overlap 3103070 3103065 3103063, overlap 3103070 GACATCCTGGGAAAC GGGCACGGGCAAA-CCG CTTG CGGCTTTGCCCGTGACA CCCGTCCTGTTTTGA Dole_2567 3103644 - 3103195 - | hypothetical protein TERM 4919 3103766 - 3103752 - R 85 -7.8 -4.76963 | opp_overlap 3103751 CGATACAACAGAAAA GCCCTA TTT CAGGGC CTCTTCAATCTCTTT Dole_2568 3104504 - 3103755 - | orotidine 5'-phosphate decarboxylase Dole_2569 3105208 - 3104519 - | anaerobic ribonucleoside-triphosphate reductase activating protein TERM 4920 3105091 - 3105071 - G 71 -8.2 -4.03234 | opp_overlap 3105056 3105072 3105086, overlap 3105056 GGCCTCGGACATAAA GTCCGGCC CTTTT GGCCGCAC CAGGTCCGGGTTGTG TERM 4921 3105395 - 3105370 - R 90 -8.9 -4.62203 | opp_overlap 3105364 3105370 TTGAAATAATGAAAA GGGCGGCCC GGTTAAAA GGGTCGCCC TTGCGTTTGCCTGTG TERM 4922 3105370 - 3105395 + r 78 -11.1 -3.30038 | opp_overlap 3105370, overlap 3105364 TTGAAATAATGAAAA GGGCGGCCC GGTTAAAA GGGTCGCCC TTGCGTTTGCCTGTG Dole_2570 3107616 - 3105424 - | anaerobic ribonucleoside triphosphate reductase TERM 4923 3107238 - 3107262 + g 77 -2.2 -5.09259 | TGTTGAGGCCCTGGA GAGAATAG CTCATGTTA CTGTTCTC TTTTATTTTCCAGTC TERM 4924 3107484 - 3107494 + g 77 -2.4 -5.08824 | CCAGGGTAAGCACCC GCAG CGT CAGC TTTTTTGCCTCCCGG TERM 4925 3107885 - 3107862 - R 77 -3.8 -5.07652 | opp_overlap 3107880 3107880, overlap 3107880 TTCGGTAAAATAAAA TTCGGGCACT TTTC AAAGCCCAAA CCGCCATGGGCGGCC TERM 4926 3107904 - 3107880 - R 78 -12.1 -2.73124 | opp_overlap 3107880 3107880 3107887, overlap 3107862 3107886 GGGCACTTTTCAAAG CCCAAACCGCC ATG GGCGGCCTGAG GTGTTTTGCATCCCT TERM 4927 3107898 - 3107886 - R 79 -10.5 -3.71649 | opp_overlap 3107880 3107880 3107887, overlap 3107880 TTTTCAAAGCCCAAA CCGCC ATG GGCGG CCTGAGGTGTTTTGC Dole_2571 3109412 - 3107979 - | hypothetical protein Dole_2572 3109571 - 3109909 + | hypothetical protein Dole_2573 3112643 - 3109965 - | DNA polymerase I TERM 4928 3110958 - 3110975 + g 70 -4.1 -4.56775 | overlap 3110963 TTTCTTGGTTTTCTT CTGGG TGGGAAGC CCCAG TTTTTCAAACAGGAT TERM 4929 3111947 - 3111963 + g 77 -2.1 -5.04733 | CAAGATAGGCGTCGT CCCGGTG GGC CAGCAGG TTTTCTTTCTGCTTC TERM 4930 3112728 - 3112744 + H 79 -10.8 -3.54951 | AAGATGTGCCGAAGC GCCCGG CGAGA CCGGGC TTGTCTAATAAGGTC TERM 4931 3113741 - 3113721 - g 89 -6.2 -5.06451 | gap 1, overlap 3113723 CATGACGGGAAAAAA CATCTCCAC CGTG GTGGAGA-G AAGCGAGCGTCACGG TERM 4932 3113740 - 3113723 - g 80 -9.9 -4.15748 | overlap 3113721 TGACGGGAAAAAACA TCTCCAC CGTG GTGGAGA GAAGCGAGCGTCACG Dole_2574 3112942 - 3114876 + | methyl-accepting chemotaxis sensory transducer TERM 4933 3114925 - 3114955 + T 75 -11.9 -2.62668 | gap 1, opp_overlap 3114907 3114906 3114935, overlap 3114924 3114927 CCCGGAAGACAGGGC CACGGGCAAAGGCC GAAA GGCCT-TACCCGTG CTTCATTCAATCATC TERM 4934 3115114 - 3115100 - T 75 -11.4 -2.56596 | overlap 3115096 GCGGGCAGGAACTCA TCCCGC TTC GCGGGA TTCAAACAGCCTGCC Dole_2575 3117601 - 3115379 - | adenylate/guanylate cyclase TERM 4935 3115639 - 3115679 + g 72 -4.5 -4.66833 | AGGCCACGGCATCAG GGCCCAGGTGATCATAGAC CTC GTAGATGGCCACCGGCGCC TTTTTACCCTTGACC TERM 4936 3116106 - 3116088 - G 89 -3.8 -5.52986 | opp_overlap 3116101 ATGCGATCAAAAAAA TCGTTAAG CAG CTCCACGA TCCGTATGGGATCCC TERM 4937 3116290 - 3116302 + g 80 -2.6 -5.31275 | overlap 3116287 CCGTTTCGTCGCGCT CGGC CACCA GCTG TTTTTTCTCCTCCAG TERM 4938 3116509 - 3116484 - G 95 -11.1 -4.84918 | GCCAGAAACAGAAAA GGGGCACTGAC ACCC GCCAGTGCACC GGCCCCCAGGTAAAC TERM 4939 3117271 - 3117281 + g 83 -8.2 -4.57073 | CGTGCCAGTCGTAAC GGCC CAC GGCC TTTTTGCAGAACATC TERM 4940 3117328 - 3117309 - G 73 -2.8 -4.74504 | overlap 3117311 3117314 ATCTGAAGGTAAAAA TAGTACTC GTTG GTGTACCA GCGGGAGTCATCAAG Dole_2576 3118395 - 3117607 - | dihydropteroate synthase DHPS TERM 4941 3117728 - 3117690 - G 75 -3.6 -4.72272 | TGCGGTGATGAAAAA TGTTGACCAGGGCCAGGC TGA GTCCGGCGTCGGCCAGCA TAGCCAGAAAAGCCA TERM 4942 3117929 - 3117945 + g 78 -6.5 -4.62069 | TCAATGATCAGCCGG GCCGG GTTCACG CCGGC TTTTTCGGCTGCCGC Dole_2577 3119135 - 3118392 - | histone deacetylase superfamily protein TERM 4943 3118915 - 3118872 - G 71 -10.2 -3.62096 | gap 1, opp_overlap 3118879, overlap 3118875 CCGGACCAGGGCAAA GCAGGGCTCGGCCAGGCCG ATTTGGG CGGCCTGCACG-GCCCCAC CCGCGGCCAGCATGG TERM 4944 3119140 - 3119126 - G 73 -3.5 -4.73388 | AATCGGGATGAAAAA CAACC TTCAT GGTCG ACTCCTTCAATGAAT TERM 4945 3119318 - 3119297 - H 71 -2.9 -4.90906 | overlap 3119307 TCACAATATCAAAAA CACAAACGG AGTG CCGGCTATG AGCAGGGACGATGAA Dole_2578 3119316 - 3119816 + | hypothetical protein Dole_2579 3119853 - 3120506 + | methyltransferase type 11 Dole_2580 3122199 - 3120517 - | putative ABC transporter ATP-binding protein TERM 4946 3121994 - 3121975 - G 76 -12.8 -3.14132 | CTCCTGCTCCAGGAA CCCCAGGG TATA CCCCGGGG ACAGCACGGCCTGGC TERM 4947 3123201 - 3123189 - g 79 -6.9 -4.60041 | overlap 3123179 3123190 3123193 ATTTACTGGGAAAAA GCCAG TGC CCGGC ACGGAAAGGTCTTTT Dole_2581 3122463 - 3123236 + | hypothetical protein Dole_2582 3124083 - 3123247 - | ATP-NAD/AcoX kinase TERM 4948 3123927 - 3123908 - G 76 -2.8 -5.00616 | GCCGCGCTCAAAAAA GTGCCG TCGCCCCC CAGCAC AAACACGCACCCCAG Dole_2583 3125391 - 3124273 - | prephenate dehydratase TERM 4949 3125080 - 3125065 - G 74 -6 -4.55826 | opp_overlap 3125077, overlap 3125060 GGCAAAATAGGAAAA GGTGCC TTCC GGCCCC AGGTAGACCGCCTTC Dole_2584 3125462 - 3125794 + | hypothetical protein TERM 4950 3126566 - 3126554 - g 90 -10.5 -4.652 | opp_overlap 3126553 3126552 3126561 3126563 AAATTATCGCAAAAA GCCCG GGC CGGGC CATTGTGGCGCTGTT Dole_2585 3125908 - 3127557 + | beta-lactamase domain-containing protein TERM 4951 3128249 - 3128234 - g 86 -4.6 -5.27923 | GAAGTTCAGAAAAAA CAGGCC CAGA AGCCCG AACGGGAAATTGTCA TERM 4952 3128583 - 3128597 + G 78 -11.4 -3.76125 | CCGACGACCTGGCCC TGGCCC TGC GGGCCA TTTCCATTCGCATCG TERM 4953 3129124 - 3129091 - g 75 -3.8 -4.82548 | gap 1 CAAAAAGATAGAAAA GGAGAGCGAC-CATC CCGAC GATGAGAAGCTCCCC TACATCGTCATCATC Dole_2586 3127628 - 3129778 + | cell divisionFtsK/SpoIIIE TERM 4954 3130101 - 3130087 - g 72 -4.9 -4.67353 | opp_overlap 3130099 TCAGCCATCGAAAAA GCCGG GCTTG CCGAC ACTGTGGTGCCTATT Dole_2587 3129775 - 3130389 + | hypothetical protein TERM 4955 3130518 - 3130530 + G 78 -6.3 -4.56597 | opp_overlap 3130518 TTATGGCATGACGAA GTATG GTC CATAC TTTTTGCCGAAAACG TERM 4956 3130788 - 3130814 + G 77 -2.2 -5.05601 | gap 1, overlap 3130790 ATTCTCATGTTTTCC GA-GGCCCGTG GATATG CGCCGGCCATC TTTTTCTCTCTACTG TERM 4957 3131729 - 3131718 - g 70 -3.6 -4.64766 | opp_overlap 3131723, overlap 3131720 TGGAGACCTGAAAAA CAGC CGCT GCCG CTCATCGTCATGCCG Dole_2588 3130386 - 3131861 + | hypothetical protein TERM 4958 3131860 - 3131841 - T 73 -7.1 -4.17048 | overlap 3131844 GCGCCCCCAAAAGAA CAACCGG TGCCGG CCGGCTG ATCAATGCGGCGAAT Dole_2589 3132665 - 3131862 - | hypothetical protein TERM 4959 3131973 - 3131989 + g 70 -3.6 -4.56597 | opp_overlap 3131963 3131961 3131974, overlap 3131974 AAACAGGTCCATCAG ACCGGT CAGAA ACCGGC TTTTTCCCACCGGCC TERM 4960 3132365 - 3132408 + g 70 -12.3 -2.78547 | gap 1, overlap 3132363 GGATGGGCAGGGCCG CGTGGCCGGCGGCCTCCAGC ATCAG GCAGGCGG-CGTTGGCCGCG TCATTGGTGGCCTGG Dole_2590 3133662 - 3132775 - | acyl-ACP thioesterase TERM 4961 3133196 - 3133180 - G 78 -6.5 -4.59773 | opp_overlap 3133186 3133188, overlap 3133183 3133186 GGCCAGGTCCAAAAA CAACCAG GAG CTGGCCG CCGTGGCCACCCTCT TERM 4962 3133193 - 3133183 - G 76 -6.8 -4.41633 | opp_overlap 3133186 3133188, overlap 3133180 3133186 CAGGTCCAAAAACAA CCAG GAG CTGG CCGCCGTGGCCACCC Dole_2591 3134090 - 3133773 - | hypothetical protein Dole_2592 3135534 - 3134080 - | vinylacetyl-CoA Delta-isomerase TERM 4963 3134109 - 3134119 + g 89 -2.4 -5.69262 | opp_overlap 3134109, overlap 3134102 CCTTGATACCACAGA GGGC TTT GGCC TTTTTCTTTTTCTCC TERM 4964 3134795 - 3134785 - G 83 -8.2 -4.56597 | GTGCCCCCCGAAAAA GGGG TTG CCCC GGTCGATGGTGCCCA TERM 4965 3135267 - 3135280 + g 83 -5.9 -5.02074 | overlap 3135245 3135265 CCCCGCCCAGGAGCC GGCCC ATGC GGGTC TTTTTTACCAGATCG TERM 4966 3135715 - 3135695 - R 85 -5.3 -5.30616 | GGACGCAAAGAAAAA GCTGAACGC TGC GCGTAAAGC GAAAAACATACCCCT Dole_2593 3136481 - 3135765 - | methyltransferase type 11 Dole_2594 3137718 - 3136453 - | glycosyl transferase group 1 TERM 4967 3136709 - 3136653 - GH 71 -6.4 -4.25104 | gap 2, overlap 3136655 CCGGGGGCACCAAAA TACCGGCGTTCCCCACCACC-TCGG-GC AGG GCACCGCCGGAGGTGCTGATCACCGGCA CTCTGCACGCCATGG TERM 4968 3136691 - 3136655 - GH 79 -10.1 -3.73042 | gap 1, overlap 3136653 GGGGGCACCAAAATA CCGGC-GTTCCCCACC ACCTCG GGCAGGGCACCGCCGG AGGTGCTGATCACCG Dole_2595 3137973 - 3138176 + | hypothetical protein TERM 4969 3138261 - 3138276 + T 91 -7.5 -5.19879 | opp_overlap 3138250 AAAGGCGGGCGGTAT GGCCG CTCAGA CGGCC TTTTTCTGTTTCAGA Dole_2596 3139637 - 3138267 - | extracellular solute-binding protein TERM 4970 3138390 - 3138441 + g 70 -4.3 -4.61231 | gap 2, overlap 3138393 CTCCCGGTTTCGCAG CAGGGGCA-GGACCTCCTTCAG-GG ACTG CCACCGGTTGGGGTCCATGCCCATG TTTTTGGCGATCTGC TERM 4971 3139191 - 3139211 + g 100 -19.7 -3.0752 | CCGCACATGGACCGT CCGGCCGGC CAG GCCGGCCGG TGTTACGATGCTGTG Dole_2597 3140455 - 3139643 - | xylose isomerase domain-containing protein Dole_2598 3140607 - 3141392 + | cobyrinic acid ac-diamide synthase TERM 4972 3141495 - 3141477 - gf 82 -10.2 -3.9461 | opp_overlap 3141462 CGCGGCCAAGAAGAA GGCCGGGT TTT ACCTGGCC ACGGAGCTGCTGGAC TERM 4973 3141668 - 3141627 - gf 85 -10.1 -4.19276 | opp_overlap 3141645, overlap 3141630 3141643 3141644 GGAAAAGGGCGAAAA GAGCGCTTTCCGGAAACGG CTGG CCGGTTCCTGAAACCGGTC CGCTTTGAAAAAGCC TERM 4974 3141665 - 3141630 - gf 71 -10.4 -2.8012 | opp_overlap 3141645, overlap 3141627 3141643 3141644 AAAGGGCGAAAAGAG CGCTTTCCGGAAACGG CTGG CCGGTTCCTGAAACCG GTCCGCTTTGAAAAA Dole_2599 3141364 - 3141660 + | hypothetical protein TERM 4975 3141645 - 3141671 + F 77 -10.1 -3.53012 | opp_overlap 3141630 3141627 3141644 3141643 CGCTTTCCGGAAACG GCTGGCCGGTT CCTGA AACCGGTCCGC TTTGAAAAAGCCGGG TERM 4976 3141698 - 3141681 - f 90 -9.1 -4.56597 | gap 1, overlap 3141643 GTCCGCTTTGAAAAA GCCG-GGC AGC GCCGCGGC GCAAACGCCCGCTGT Dole_2600 3141755 - 3142792 + | beta-lactamase domain-containing protein Dole_2601 3144377 - 3142953 - | UDP-N-acetylmuramate TERM 4977 3144678 - 3144694 + H 81 -10.8 -3.78775 | overlap 3144670 GTTGGACCGCTCATC CCGGGC GTTTA GCCCGG TTTCATGGTAAAGAG Dole_2602 3144767 - 3145897 + | hypothetical protein TERM 4978 3146168 - 3146190 + F 77 -6.4 -4.57353 | overlap 3146170 ATAATTATTCTCCAC GCTTATATAG ATT CTATATAATC TTTTGTATGATAAGG TERM 4979 3146170 - 3146188 + F 70 -7.6 -3.89814 | overlap 3146168 AATTATTCTCCACGC TTATATAG ATT CTATATAA TCTTTTGTATGATAA TERM 4980 3146390 - 3146336 - f 74 -10.7 -2.86218 | opp_overlap 3146340 3146352 3146389, overlap 3146335 3146339 TAGAATCAATATAAT CTAC-GTTCGCCGAGCGCGCAGCGGAC TTC GTCCT-TGCGCCCTCGGCGAATTGCCG CAGTTGAGCGACGAT TERM 4981 3146386 - 3146339 - f 84 -13.4 -2.6737 | gap 1, opp_overlap 3146340 3146352, overlap 3146336 3146335 AATCAATATAATCTA CGTTCGCCGAGCGCGCAGCGGAC TTC GTCCT-TGCGCCCTCGGCGAATT GCCGCAGTTGAGCGA TERM 4982 3146467 - 3146410 - f 100 -14.1 -4.4767 | gap 1, opp_overlap 3146390 3146389, overlap 3146411 TGAGCGACGATAAAA TCGCTCCACCGCCTTGT-CGCTTCCCGC TGC GCGCTCAGCGAACAAGACGTTGGAGCGG ACCCTTTACCGTCAC TERM 4983 3146466 - 3146411 - f 100 -17.6 -3.2812 | gap 1, opp_overlap 3146390 3146389, overlap 3146410 GAGCGACGATAAAAT CGCTCCACCGCCTTGT-CGCTTCCCGC TGC GCGCTCAGCGAACAAGACGTTGGAGCG GACCCTTTACCGTCA Dole_2603 3146491 - 3147264 + | hypothetical protein TERM 4984 3147849 - 3147859 + F 77 -6.8 -4.56597 | opp_overlap 3147849 TTCCTGACAACGCAA TCGC TGA GCGA TTTTTCGAGGAGGAC TERM 4985 3148448 - 3148423 - f 75 -10.3 -3.3334 | overlap 3148410 AAGCCCAGCGTATAA CCAGGCAGCCC AAAA GGACCGCCAGG GCATTCGGCTTTTGA Dole_2604 3148558 - 3148965 + | hypothetical protein TERM 4986 3149204 - 3149185 - f 76 -7.1 -4.4767 | overlap 3149187 TGAGCGACGATAAAA TCGCCGC TCAACT GCGGCAA TTAGGGAAAAAATAT Dole_2605 3149531 - 3149860 + | transcriptional modulator of MazE/toxin, MazF TERM 4987 3149902 - 3149882 - f 95 -14.7 -3.75437 | opp_overlap 3149880 3149895 3149896, overlap 3149895 AACCACGGCATCAAA GCGACGGCA AAA TGCCGCCGC GCCTTATGCCGGCCG Dole_2606 3150001 - 3150243 + | prevent-host-death family protein Dole_2607 3150243 - 3150503 + | addiction module antitoxin TERM 4988 3150566 - 3150519 - f 93 -13.5 -3.78934 | gap 2 TTTTTTGTATAACAA GCGGGTGCAGGTGAGCCTTCCGC TGGT GCTACAGGC-CACCTG-ACCCGC GGCGTTATATGAAAT TERM 4989 3150981 - 3150968 - g 70 -3.7 -4.56775 | overlap 3150970 AGCGGGGTGTAAAAA GTCGG GCGT CCGTC GCCTGGTGCATGTCA Dole_2608 3150666 - 3151655 + | 3-beta hydroxysteroid dehydrogenase/isomerase Dole_2609 3151652 - 3152140 + | hypothetical protein TERM 4990 3152312 - 3152326 + G 76 -3.5 -5.00884 | overlap 3152310 AAAGGAATAAGCGGC GGTGC AAACG GCATC TTTTTTGACAAGAAT Dole_2610 3152192 - 3153100 + | hypothetical protein TERM 4991 3153097 - 3153077 - f 79 -2.3 -5.4505 | overlap 3153078 CCCGTTAACAAAAAA GGCGGGGGC AGC GACCCGGCA TGACGGGATACGCAT TERM 4992 3153274 - 3153260 - g 70 -4.2 -4.62069 | opp_overlap 3153260 3153267 CCGCCATTGCAAAAA GATTCG AGG CGCATC TGCCTTATACGGTCA Dole_2611 3153181 - 3153525 + | hypothetical protein Dole_2612 3153670 - 3153861 + | hypothetical protein TERM 4993 3153886 - 3153920 + F 100 -18 -3.51232 | overlap 3153882 3153887 3153889 CACTGCGTGAACCTT CCAGGCCGGATGTTTT TTT AAAGCATCCGGCCTGA TTCATTTCAACAAAG TERM 4994 3153887 - 3153919 + F 100 -21.5 -2.70525 | overlap 3153886 3153882 3153889 ACTGCGTGAACCTTC CAGGCCGGATGTTTT TTT AAAGCATCCGGCCTG ATTCATTTCAACAAA TERM 4995 3153889 - 3153917 + F 100 -18.3 -2.89569 | overlap 3153887 3153886 3153882 TGCGTGAACCTTCCA GGCCGGATGTTTT TTT AAAGCATCCGGCC TGATTCATTTCAACA TERM 4996 3154111 - 3154121 + G 70 -2.4 -4.7657 | overlap 3154100 ACCAGGAGTGCGAGC ACGC CCT GCGG TTTTTCAAGTTTTTC TERM 4997 3154421 - 3154401 - g 83 -8.1 -4.62069 | TTCTCACGGGAAAAA CCGGCCGTG TGG CGCTGCCGG AACTGCGGCTACCTG Dole_2613 3153945 - 3154520 + | rubrerythrin Dole_2614 3156389 - 3154695 - | FAD linked oxidase domain-containing protein TERM 4998 3154972 - 3155003 + g 70 -2.2 -4.74013 | opp_overlap 3154976, overlap 3154975 GCGTAAAAATGGGAA GAATGGGTCATG CAGACGGC CCTGACCCGGTC TTTTATGTATTTGCG Dole_2615 3158084 - 3156522 - | carbohydrate kinase FGGY TERM 4999 3157472 - 3157484 + g 89 -6.2 -5.14563 | CCGGAAAAAACAGGG CCGG CAGAT CCGG TTTTTTCGTCCACCG TERM 5000 3158263 - 3158249 - R 75 -11.4 -2.56715 | overlap 3158245 ACGGGCAGGAACTCA TCCCGC TTC GCGGGA TTCAAACAGCCTGCC Dole_2616 3159996 - 3158413 - | FAD dependent oxidoreductase Dole_2617 3160688 - 3159996 - | regulatory protein GntR HTH TERM 5001 3160107 - 3160128 + g 83 -5.7 -4.87665 | opp_overlap 3160107 3160105 3160108, overlap 3160108 3160109 CAGACTTTTATAATA CCGCCGGGA AGCG TCCCGGCCC TTTTTCTCGGTAAAG TERM 5002 3160109 - 3160126 + g 71 -12.7 -2.70788 | opp_overlap 3160108 3160107 3160105, overlap 3160108 3160107 GACTTTTATAATACC GCCGGGA AGCG TCCCGGC CCTTTTTCTCGGTAA TERM 5003 3160864 - 3160909 + H 75 -5.4 -4.72272 | gap 2, opp_overlap 3160858, overlap 3160880 CAGGCAAATGTGGAC GGGCAA-CCC-TGCGCACCGCC TTAA GGCGATTTTCAGGGGCTTGCCC TTTTTCATGACCAGA Dole_2618 3160960 - 3161709 + | methylthioadenosine phosphorylase TERM 5004 3161725 - 3161711 - f 87 -12.8 -3.33925 | overlap 3161709 TTTCAAAAATATAGA CCGGCC GGC GGCCGG GACCCATCCCTTAAA TERM 5005 3162007 - 3161995 - g 100 -9.1 -5.00616 | opp_overlap 3161995 TCCGGTTCGAAAAAA GGGGA AAA TCCCC TTTCGCACCATCGGC Dole_2619 3161756 - 3162277 + | adenine phosphoribosyltransferase Dole_2620 3162278 - 3163255 + | hypothetical protein Dole_2621 3163361 - 3164095 + | hypothetical protein Dole_2622 3164124 - 3164948 + | short-chain dehydrogenase/reductase SDR TERM 5006 3165183 - 3165198 + G 81 -3.2 -5.27335 | gap 1, overlap 3165183 3165184 GCTCGGCACCCCCTT C-GGCCT GCT GGGCCAG TTTTTCTTTGGCACC TERM 5007 3165983 - 3166027 + G 100 -8.4 -4.99638 | gap 1, overlap 3165979 CCATCAACGGCATCG GCCTGCTGGCCGCCCTGTTTG TCCA CTCACCGG-CGGCCATCGGGC TTTTTGTCTGCCTGT Dole_2623 3164998 - 3166302 + | major facilitator transporter Dole_2624 3167186 - 3166404 - | RNA methyltransferase TERM 5008 3166967 - 3166942 - G 100 -14.7 -5.13741 | GCAATGTAAGAAAAA GGCGACACCGC CGTG GCCGTGTCGCC GACAATCTCGATCTT Dole_2625 3167861 - 3167442 - | nucleoside-diphosphate kinase TERM 5009 3167871 - 3167885 + r 71 -5 -4.48713 | TTCCATGTATGGCTC CTTGTT TGC AACAGG TTTATTGTTAATGGC TERM 5010 3167995 - 3167979 - R 80 -3 -5.42862 | gap 1 AGACCGGGAAAAAAA GCC-TTC AGTC GAACGGC ATGAAGAATCACCTG Dole_2626 3169767 - 3168004 - | TPR repeat-containing protein TERM 5011 3168174 - 3168161 - G 83 -8.1 -4.61566 | TTGTAAACCATAAAA GCCGA GGGA TCGGC GGCCAGGGCGTTCTG TERM 5012 3169044 - 3169009 - G 95 -2.4 -6.06723 | gap 1, overlap 3169010 3169023 GGCCTGAAAAAAAAA CCGGCCGAACAGAACCG CCC CGGCCCCAAT-GGCCGC GATCGGGAGCTTCTC Dole_2627 3170681 - 3169761 - | methyltransferase type 11 TERM 5013 3169830 - 3169816 - G 72 -8.6 -3.91897 | opp_overlap 3169815 TCCGGCACGGATAAA CCATCA TGG TGATGG GGTTTCTGAAAAACC TERM 5014 3169898 - 3169878 - G 93 -12.5 -4.19817 | opp_overlap 3169878 GGGATCGAGGTAAAA CCGCGCCCG CCC CAGGCGCAG TGTGTCTGCGAAAAA TERM 5015 3170653 - 3170630 - G 70 -4.4 -4.55118 | overlap 3170631 GAATGGTATACAAAA GCCGTGGAGC ATCA GCACCACAGA GGTTGCAGGCTTGCC Dole_2628 3172314 - 3170701 - | radical SAM domain-containing protein TERM 5016 3172119 - 3172090 - G 71 -7.3 -4.13767 | gap 1, overlap 3172094 CGCCGCACCGGAAAA TTCATGGGACATCA GGC TGATG-CCCACAAA CCCGGGATTGCGATC TERM 5017 3172255 - 3172233 - G 71 -7.7 -4.09685 | opp_overlap 3172232, overlap 3172242 CCCGATCCTGCAAAA CGGCATGAA TCTGC TTCAGGCCG ATGGTGTCCAGATCG TERM 5018 3172532 - 3172518 - R 77 -2.9 -5.2166 | CAATAACGGAAAAAA GTTTT ACAGA AAAAC GATTGTGCCGGGGTT Dole_2629 3173534 - 3172521 - | ABC transporter-related protein TERM 5019 3172856 - 3172866 + g 70 -2.4 -4.72272 | CTGAATGCCACGGCC CGGG CAC CACG TTTTTGCTGCCCGCC Dole_2630 3174267 - 3173578 - | binding-protein-dependent transport systems inner membrane component TERM 5020 3174317 - 3174288 - R 100 -25.1 -5.10029 | opp_overlap 3174281 3174278 ATCAATCCGAAAAAA CCGTCGGCGGCAG GCGC CTGCCGCCGACGG TTAAGGATGCTTTTC TERM 5021 3174460 - 3174416 - R 76 -7 -4.32402 | gap 1, opp_overlap 3174421 3174421 GGTCAAGGAAAACAA GGGCTGACGCG-GAGGCGTAC TGTT GTACGCCGCACAAGGAAGCCC GCAGTTTGACACAGA Dole_2631 3175341 - 3174508 - | ABC transporter, periplasmic substrate-binding protein TERM 5022 3174938 - 3174924 - G 75 -8.5 -4.07885 | opp_overlap 3174916 3174914 CACGGCTGGCGAAAA CCGCC TGTTT GGCGG TAATGGCGGCCAGGG Dole_2632 3176448 - 3175375 - | ABC transporter-related protein TERM 5023 3175510 - 3175463 - G 78 -9.8 -4.08767 | gap 1 TTGATGCGGGCAAAA GCTTCAAGCGACACGGCCGACCG CCA CGGCAGGCCGCCT-GCCTGAATC ATGGCCTCCACATAG TERM 5024 3175787 - 3175773 - G 79 -7 -4.56775 | opp_overlap 3175775, overlap 3175774 3175777 ACGGTTTTTGAAAAA GCCAGG CCA CCGGGC CGGTCTGCTCAATAC Dole_2633 3177245 - 3176430 - | binding-protein-dependent transport systems inner membrane component TERM 5025 3176868 - 3176844 - G 77 -10.7 -3.87815 | GGGCAGGCCCACAAA GGTCAGCACCG TCA CAATGCCGACC GTGGACCCCATCACC TERM 5026 3177082 - 3177071 - G 71 -7.2 -4.21322 | overlap 3177072 CGAACAGAAAGGAAA GGGC ACCG GCCC AGCCCGCGGTGTAAA Dole_2634 3178257 - 3177277 - | hypothetical protein TERM 5027 3177372 - 3177361 - G 71 -7.2 -4.20516 | overlap 3177362 CCGGCAGGGAATAAA GGGC GGCT GCCC CATATCGGCCAGCAC TERM 5028 3179720 - 3179690 - g 86 -8.8 -4.57073 | overlap 3179691 3179692 CATGGCCGGGAAAAA GGGGACGGCGGGCA GGC TGCTGGCCGCCGCC AAAGGGGCCATGGGC Dole_2635 3178575 - 3179753 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5029 3179842 - 3179821 - f 100 -15.9 -5.80951 | opp_overlap 3179821 ACTGAAAATAAAAAA GGGGACGGT GCAA ACCGTCCCC TTTTTGCGTGGTGCC TERM 5030 3179821 - 3179842 + F 100 -15.9 -4.68593 | opp_overlap 3179821 ACTGAAAATAAAAAA GGGGACGGT GCAA ACCGTCCCC TTTTTGCGTGGTGCC TERM 5031 3180038 - 3180056 + F 100 -16 -3.7829 | GCCCCGTGCAGCTTG GCCACGCC GCA GGCGTGGC TTTCCTCGCTCTAAT TERM 5032 3180112 - 3180098 - f 75 -11.4 -2.56596 | overlap 3180094 GCGGGCAGGAACTCA TCCCGC TTC GCGGGA TTCAAACAGCCTGCC TERM 5033 3180277 - 3180259 - f 71 -8.2 -3.6581 | opp_overlap 3180251 3180249 3180249, overlap 3180257 ATTACCGGCAAAATA TTGCTGCT TAT AACAGCAA AAGTCGATAAAAGGC Dole_2636 3180428 - 3180793 + | XRE family transcriptional regulator Dole_2637 3180786 - 3182087 + | HipA domain-containing protein TERM 5034 3182078 - 3182066 - f 100 -9.1 -5.18355 | opp_overlap 3182064 GGTAAAAATTAAAAA CAGCC ACA GGCTG ACCTTATAGAAAGCG Dole_2638 3182291 - 3183307 + | transposase IS4 family protein TERM 5035 3183429 - 3183442 + F 75 -3.7 -5.02074 | overlap 3183430 3183441 CTGAAAATTTTTTAC CGCCG CAAA CGGCC TTTTTTAAAAAATGG Dole_2639 3183555 - 3183848 + | hypothetical protein Dole_2640 3183820 - 3184047 + | helix-turn-helix protein, CopG TERM 5036 3184074 - 3184057 - T 74 -11.3 -3.07947 | opp_overlap 3184071 3184071, overlap 3184048 CAATAACGGGTAACA CGGGCAA CACG TTGCCCG TGCCCGAAGGGTAAG TERM 5037 3184159 - 3184137 - T 85 -13.5 -2.87132 | overlap 3184139 TTCCTGTGCTACACA CACTGGCAG GCAGG CTGCCAGTG TCACCCGCAGCAGTA TERM 5038 3184157 - 3184139 - T 72 -10.3 -2.98823 | overlap 3184137 CCTGTGCTACACACA CTGGCAG GCAGG CTGCCAG TGTCACCCGCAGCAG TERM 5039 3184338 - 3184355 + T 83 -12.7 -3.07935 | GCCCCGTGCAGCTTG GCCACGC CCCG GCGTGGC TTCCCTCGCTCCAAT Dole_2641 3185889 - 3185569 - | hypothetical protein TERM 5040 3186206 - 3186185 - R 100 -15.9 -5.4505 | opp_overlap 3186185 GCTGTCAACAAAAAA GGGGACGGT GCAA ACCGTCCCC TTTTTTGTTCTTTTT TERM 5041 3186185 - 3186206 + r 100 -15.9 -5.80727 | opp_overlap 3186185 GCTGTCAACAAAAAA GGGGACGGT GCAA ACCGTCCCC TTTTTTGTTCTTTTT TERM 5042 3186220 - 3186252 + r 71 -7 -4.03085 | overlap 3186247 CCTTTTTTGTTCTTT TTTCTGTCCGGTGC GGCCG GCATCAGGCGGAAA TTTCGATTTTTCTGG Dole_2642 3186646 - 3186242 - | heat shock protein Hsp20 TERM 5043 3186564 - 3186544 - G 70 -4 -4.57073 | opp_overlap 3186563, overlap 3186546 CATCGGTTTCAAAAA TATCCACC GCCGG GGTGAACA CGGCGCCCGGCCGGG Dole_2643 3187155 - 3186700 - | heat shock protein Hsp20 Dole_2644 3187578 - 3187757 + | rubredoxin-type Fe(Cys)4 protein Dole_2645 3187782 - 3188234 + | thioredoxin TERM 5044 3188251 - 3188235 - f 82 -11.5 -3.29144 | GCACTGCTGGCATAA CCCGGCA TGT CGCCGGG GTAAAAACCCACCAG TERM 5045 3188282 - 3188272 - f 73 -3.2 -4.92783 | AACCCACCAGAAAAA CCGT GTC ACGA TACAATGGTGTCTGA Dole_2646 3188579 - 3188788 + | hypothetical protein Dole_2647 3188891 - 3189466 + | rubrerythrin TERM 5046 3189487 - 3189514 + F 100 -24.2 -3.5394 | GCAGAGCTTCAATCC GCAGGGGCGCGG CCGG CCGCGCCCCTGC TTTAACCCGAAGTTT Dole_2648 3189548 - 3189982 + | flavodoxin/nitric oxide synthase TERM 5047 3190365 - 3190386 + G 84 -3.6 -5.26316 | opp_overlap 3190375, overlap 3190375 GTTCGGGTCCCTGCT GGCCATTG AAGCCA CTGTGGCC TTTTTTCTGGAGTCG TERM 5048 3191082 - 3191097 + G 84 -6.8 -4.72272 | overlap 3191076 GTCACTGTTCTGCCT GCTGAC GGCA GTCGGC TTTTTCCTGCGCAAC TERM 5049 3191257 - 3191246 - g 71 -7.2 -4.25283 | ACGGGGTCATGAAAA CCGC GGAC GCGG TGTCGGCCAATATTT Dole_2649 3190081 - 3191391 + | cytochrome bd ubiquinol oxidase subunit I TERM 5050 3191957 - 3192006 + G 78 -14.4 -2.64616 | gap 3, opp_overlap 3191954 3191952, overlap 3191971 3192003 CATCAAAACAGAGGG GC-CGCTCCAGG-AACGGGCCGCGG GAA CCGCGGCG-GTTGCCTGGATCGTGC TGCTGTGCGTGGCGG TERM 5051 3192257 - 3192275 + G 75 -10.2 -3.77196 | ATCAAAACTGGATCC GGCCGCCA GCC TGACGGCC TTTAATGCATCGTCC Dole_2650 3191403 - 3192416 + | cytochrome d ubiquinol oxidase, subunit II Dole_2651 3192744 - 3193085 + | cytochrome c class III TERM 5052 3193212 - 3193235 + G 75 -12.4 -3.29144 | TTGCGCCCCATCTTG CCTGCGGCGT GGTG ACGCCGGAGG TTCTGCGCAAACTGG TERM 5053 3193307 - 3193268 - g 70 -4.2 -4.57073 | gap 1, overlap 3193273 3193274 GATGCGGCCGAAAAA TACAATGCCGCGGCCGTCA AGG TGACCAGCGCGGC-CCGCA TCGCCCTGGTGGGGA Dole_2652 3193124 - 3193798 + | nitrite and sulphite reductase 4Fe-4S region Dole_2653 3193884 - 3194045 + | rubredoxin-type Fe(Cys)4 protein TERM 5054 3194074 - 3194095 + F 91 -12.3 -3.83409 | opp_overlap 3194074 AGCTGAACGAGAGAA GGGATACGG CCTG CCGTGTCCC TTTGCTCATCTCTGC TERM 5055 3194095 - 3194074 - f 77 -10.1 -3.60214 | opp_overlap 3194074 AGCTGAACGAGAGAA GGGATACGG CCTG CCGTGTCCC TTTGCTCATCTCTGC Dole_2654 3194155 - 3195345 + | flavodoxin/nitric oxide synthase Dole_2655 3195348 - 3195533 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5056 3195555 - 3195582 + T 100 -16.3 -5.54079 | gap 1, opp_overlap 3195541 3195555 CCCGTGCGTAAAAAA GGCCCGGC-GCC ATGAC GGCTGCCGGGCC TTTTTTGCTTTTTAC TERM 5057 3195582 - 3195555 - T 100 -17 -5.00616 | gap 1, opp_overlap 3195555, overlap 3195541 CCCGTGCGTAAAAAA GGCCCGGC-GCCA TGA CGGCTGCCGGGCC TTTTTTGCTTTTTAC Dole_2656 3196125 - 3195622 - | hypothetical protein TERM 5058 3195811 - 3195801 - G 74 -2.4 -4.9725 | opp_overlap 3195808, overlap 3195787 AGCCGGATACAAAAA GCTG AAA CCGC GCCGTTGCCGGCTTT TERM 5059 3195812 - 3195823 + g 87 -7.2 -4.98531 | opp_overlap 3195787, overlap 3195808 AAAAGCTGAAACCGC GCCG TTGC CGGC TTTTTGATTTCAGGC TERM 5060 3196164 - 3196186 + r 82 -10.5 -3.8046 | opp_overlap 3196144, overlap 3196183 CAGGCGGTCGCGGCA CCGGCCCGT CAGGC ACCGGCCGG TTTCCGGTTTTTGGA TERM 5061 3196183 - 3196193 + r 88 -8.2 -4.81249 | overlap 3196164 CCCGTCAGGCACCGG CCGG TTT CCGG TTTTTGGATTTCAGG Dole_2657 3198922 - 3196172 - | pyruvate phosphate dikinase TERM 5062 3198386 - 3198401 + g 84 -7.5 -4.86731 | opp_overlap 3198357 CGTCAATTCGGTGTC GGCCG ATACCC CGGCC TTTTGTTTGGCCCGG Dole_2658 3199148 - 3200125 + | hypothetical protein TERM 5063 3200928 - 3200908 - g 71 -12.6 -2.64155 | overlap 3200904 3200905 CTTCGTTTAAACGGA CCGGTCCA CCTGC TGGACCGG ATGAAGGGGCTGTGG TERM 5064 3201022 - 3201039 + G 77 -2.5 -5.14563 | overlap 3201024 GAGATCGCCGCCTAC CAGGACC ATGT GGCCCGG TTTTTTGATACCGGC Dole_2659 3200116 - 3201090 + | dihydrouridine synthase DuS TERM 5065 3201065 - 3201090 + T 74 -6.3 -4.46212 | overlap 3201066 CCGGCCCACGAATTG CCAAAAAAAAG CCTA CTTTTTTTTGA TTTTCTCATGGGCCG TERM 5066 3201066 - 3201089 + T 73 -9.8 -3.27406 | overlap 3201065 CGGCCCACGAATTGC CAAAAAAAAG CCTA CTTTTTTTTG ATTTTCTCATGGGCC Dole_2660 3201271 - 3201077 - | hypothetical protein TERM 5067 3201282 - 3201292 + r 77 -4 -5.07971 | overlap 3201286 TTCATGATCGGTTCC CTTT GAA AAAG TTTTTCCTTGTTTTA Dole_2661 3202516 - 3201521 - | O-methyltransferase family protein Dole_2662 3203517 - 3202717 - | short-chain dehydrogenase/reductase SDR TERM 5068 3203292 - 3203336 + g 72 -6.2 -4.35926 | gap 1, opp_overlap 3203274, overlap 3203294 GCTCCACAATGGCGG GAAGCTGGTCCAT-GCGGCCC ACGT GGGCCGCCACGGGCAGGCACC TTTTCCCTTTGGCCT TERM 5069 3203448 - 3203428 - G 71 -10.4 -3.57144 | gap 1, opp_overlap 3203433, overlap 3203401 3203400 CCCGGCATCGGCAAA GGCCAGGGC CGTG GCCC-GGCC GATGCCCATGGAACC TERM 5070 3203960 - 3203924 - R 79 -11.8 -3.21276 | gap 1, opp_overlap 3203950, overlap 3203922 CGTTTTGGGACAATA GT-TACCCCGGACATTT CATG AAATGTCCGGGCTATAC CGGTTCGATCCACCC Dole_2663 3205016 - 3203955 - | branched-chain amino acid aminotransferase TERM 5071 3204723 - 3204750 + g 77 -7.6 -4.40561 | gap 1, opp_overlap 3204721 3204720, overlap 3204722 3204723 3204738 GGGAATGCACAACCG CC-GGCACGACTC GTT GAGCCGGGCCAGG TTCTTTTTCGGCCGG TERM 5072 3205105 - 3205065 - R 74 -9 -3.68569 | opp_overlap 3205069 3205071, overlap 3205067 GTACGTATGCAATAA GATTGATTCGTCGCCGCG CTCCT CGCGATGACGAATCTATT CCCGGGACATCCGGA TERM 5073 3205103 - 3205067 - R 82 -11.6 -3.42256 | opp_overlap 3205069 3205071, overlap 3205065 ACGTATGCAATAAGA TTGATTCGTCGCCGCG CTCCT CGCGATGACGAATCTA TTCCCGGGACATCCG TERM 5074 3205069 - 3205101 + r 90 -14.2 -3.01924 | opp_overlap 3205067 3205065, overlap 3205071 GTATGCAATAAGATT GATTCGTCGCCGCG CTCCT CGCGATGACGAATC TATTCCCGGGACATC TERM 5075 3205071 - 3205099 + r 74 -11 -3.06696 | opp_overlap 3205067 3205065, overlap 3205069 ATGCAATAAGATTGA TTCGTCGCCGCG CTCCT CGCGATGACGAA TCTATTCCCGGGACA Dole_2664 3205580 - 3205128 - | hypothetical protein TERM 5076 3205467 - 3205457 - G 77 -2.4 -5.1101 | opp_overlap 3205458, overlap 3205458 CGATCAGGGAAAAAA CCCC GCT GCGG ATCTCATGCCGGACG TERM 5077 3205752 - 3205736 - H 85 -5.8 -5.0133 | CACCTGTGCAAAAAA GCACGG AAAAA CCATGC GTTCCGGTTTTGGCT TERM 5078 3205828 - 3205813 - H 73 -3.4 -4.85653 | GACAGACAAAACAAA TAAAAA GGAG TTTTTA CCATTATGACTGACA TERM 5079 3205897 - 3205908 + G 74 -7.2 -4.35044 | opp_overlap 3205881 CCCGTCCGTTTCGGG CCGG AGAG CCGG TTTGTGTTTGAATGC TERM 5080 3206083 - 3206072 - g 78 -3.6 -5.00884 | ACCTTCTGGAAAAAA CCGA TCTG CCGG TGGTGTCCCTGAAGC Dole_2665 3205834 - 3206631 + | hypothetical protein Dole_2666 3207822 - 3206650 - | beta-lactamase TERM 5081 3207020 - 3206991 - G 100 -14.9 -3.90318 | opp_overlap 3207009 CCAGCACGCCATAAA GCCGGGCCAGGGC CAGG GCCGTGGCCTGGC CATTGGCCGACGGGA TERM 5082 3207492 - 3207502 + g 84 -2.4 -5.44119 | TGCGGACAGTGATGT GGCC CTT GTCC TTTTTTTCAAATCCC TERM 5083 3207810 - 3207821 + g 79 -5.8 -4.84492 | overlap 3207809 CGCGAATATCCACCG TGGC AGCC GCCA TTTTGTTGTCCTTAA Dole_2667 3208867 - 3207833 - | dihydrodipicolinate synthase TERM 5084 3208981 - 3209019 + H 73 -3.3 -4.88163 | gap 2, opp_overlap 3208987, overlap 3208990 CCGTTTTAAAAATGG CCAAAACC--CGAAAAGCG GGA CGGTTTTCTTTGGTTTTGG TTTCTTTTCTCTTGA Dole_2668 3209130 - 3209750 + | TPR repeat-containing protein Dole_2669 3209852 - 3211165 + | sulfite reductase, dissimilatory-type alpha subunit TERM 5085 3211540 - 3211528 - g 74 -2.6 -5.0133 | opp_overlap 3211530 3211531, overlap 3211530 3211531 GAGCCGCTGAAAAAA GACC TGGCC GGCC GGAAATTTGCCGGCG Dole_2670 3211180 - 3212334 + | sulfite reductase, dissimilatory-type beta subunit TERM 5086 3212387 - 3212343 - f 90 -14.3 -3.08464 | opp_overlap 3212345, overlap 3212352 3212354 3212356 3212358 TGACTAGTCACTTAA CCGGCAATAGAGAGACGGGGA TGA TCTCCGTCTCTCTTTTGCCTT TTTGAAGGAGAGCTA TERM 5087 3212345 - 3212385 + F 100 -23.5 -4.56597 | opp_overlap 3212343 3212352 3212354 3212356 3212358 ACTAGTCACTTAACC GGCAATAGAGAGACGGGGA TGA TCTCCGTCTCTCTTTTGCC TTTTTGAAGGAGAGC TERM 5088 3212378 - 3212352 - f 100 -15.2 -3.0644 | opp_overlap 3212345, overlap 3212343 3212354 3212356 3212358 ACTTAACCGGCAATA GAGAGACGGGGA TGA TCTCCGTCTCTC TTTTGCCTTTTTGAA TERM 5089 3212376 - 3212354 - f 81 -12 -3.08867 | opp_overlap 3212345, overlap 3212352 3212343 3212356 3212358 TTAACCGGCAATAGA GAGACGGGGA TGA TCTCCGTCTC TCTTTTGCCTTTTTG Dole_2671 3212405 - 3212653 + | dissimilatory sulfite reductase D TERM 5090 3212863 - 3212891 + G 87 -13.1 -3.83026 | opp_overlap 3212859 3212847 TCCCGACTATATTGA CGCCGGCTGGC TTTCATT GGCAGCCGGCG TTTCCTGTCGGAACC Dole_2672 3212714 - 3214117 + | cobyrinic acid a,c-diamide synthase Dole_2673 3216571 - 3214361 - | RecD/TraA family helicase TERM 5091 3215163 - 3215149 - G 73 -11.4 -3.38046 | overlap 3215147 GGGTCAGCTCAAACA CCGGCA GGC TGCCGG ATGCAATCAGATCCC TERM 5092 3215290 - 3215278 - G 100 -5.5 -5.78622 | GCAGGGCAAAAAAAA GCGGA ATG TCCAC CATGGAGGCCTCGTC TERM 5093 3215699 - 3215681 - G 84 -13.1 -3.66999 | opp_overlap 3215674 3215673 AGGGACCGAGGCAAA CGCGGCC AGCCG GGCCGCG ATGCCGGTTTCAGCG TERM 5094 3215897 - 3215879 - G 76 -7.4 -4.42062 | opp_overlap 3215879 CAGGTGGGAAACAAA GGCAAACA CGT TGCCTGCC GTTCTGTTCTGGTCC TERM 5095 3216093 - 3216109 + g 73 -3.5 -4.72272 | overlap 3216094 AAAATCCGGGCGCTG AGGGAGG CAT CCACCCC TTTTTCCTGCAAAAA TERM 5096 3216211 - 3216227 + g 80 -9.4 -4.18018 | TGCCCGGCACTTCGG CCAGCC GCTCA GGCTGG TTTTCAATCACGGAA Dole_2674 3217155 - 3216568 - | histidinol-phosphate phosphatase family protein Dole_2675 3217901 - 3217152 - | rare lipoprotein A TERM 5097 3218105 - 3218120 + G 78 -6.1 -4.61231 | overlap 3218096 CTACTTTGCCGTGCT GGGCA TCTTTC TGCCC TTTTTCAACCTCTAC TERM 5098 3218290 - 3218300 + G 86 -3.2 -5.56264 | ACATGGTCAGTGCCG GCTT GTG GAGC TTTTTTCTGTTTACC TERM 5099 3218437 - 3218426 - g 87 -3.6 -5.40072 | opp_overlap 3218435 3218436 GGGCGCGGAAAAAAA CAGC TACG GCCG GGTCCGGGCCTGGGG Dole_2676 3218034 - 3219197 + | major facilitator transporter TERM 5100 3219460 - 3219484 + G 100 -9.2 -5.86976 | overlap 3219464 3219468 TGCCTCATTTCTGGG CGCCCTGGCG CTGGC CGCCAGCGTG TTTTTTCTTTTCTAC TERM 5101 3219468 - 3219482 + G 93 -11.4 -4.55111 | overlap 3219464 3219460 TTCTGGGCGCCCTGG CGCTGG CCG CCAGCG TGTTTTTTCTTTTCT TERM 5102 3219752 - 3219795 + G 82 -8.8 -4.52589 | gap 1, overlap 3219754 3219755 CTGGCCTATGCCACC GACGCCAGGCTGCTGTTGGCC GCG GGC-ATCATCAGCCTGGCCTG TTTTCTGTCCGCCCG TERM 5103 3219754 - 3219793 + G 81 -11.4 -3.87627 | gap 1, overlap 3219752 3219755 GGCCTATGCCACCGA CGCCAGGCTGCTGTTGGCC GCG GGC-ATCATCAGCCTGGCC TGTTTTCTGTCCGCC TERM 5104 3219755 - 3219792 + G 84 -14.9 -2.92094 | gap 1, overlap 3219754 3219752 GCCTATGCCACCGAC GCCAGGCTGCTGTTGGCC GCG GGC-ATCATCAGCCTGGC CTGTTTTCTGTCCGC TERM 5105 3220126 - 3220138 + G 76 -3.3 -4.88129 | opp_overlap 3220110 GTCCGACGTGGTCAA CACCG GCA CCGTG TTTTTCGTGATTTTT Dole_2677 3219224 - 3220300 + | hypothetical protein TERM 5106 3220850 - 3220817 - g 77 -8 -4.32201 | gap 1, opp_overlap 3220818 TGAACGAAGTGAAAA CCAGCGGCTCCCGGC TGTTT GCCGTG-GACGCCGG CACCGACGCCAAAGC Dole_2678 3220297 - 3221172 + | hypothetical protein TERM 5107 3221192 - 3221202 + G 77 -8.2 -4.32436 | overlap 3221198 TAAAAACCGCTTCAC GCCG TAC CGGC TTTTGCTGGTGGTGT Dole_2679 3221169 - 3222380 + | Mur ligase middle domain-containing protein TERM 5108 3222423 - 3222433 + F 78 -5.4 -4.84274 | opp_overlap 3222418, overlap 3222418 TTCATTGAAAGACTG GAGA CAG TCTC TTTTTCGTCTCATTA TERM 5109 3223382 - 3223369 - g 73 -3.1 -4.79949 | TTGCCAAAAAAATAA CGAAA ACCA TTCCG GAAGTGGTCAGCGTG Dole_2680 3222477 - 3223445 + | ExsB family protein TERM 5110 3223760 - 3223784 + G 93 -13.5 -3.85698 | GGTGCCGGACGAGGG GGCCGTGGCAG AGG CGGCCATGGCC TTTATGGCCGGCAAG TERM 5111 3224076 - 3224089 + G 90 -8.1 -4.9792 | GCCCAGGGCCTGGCA GCGGA AATC TCCGC TTTTTGTCTGGACTG Dole_2681 3223461 - 3224144 + | hypothetical protein Dole_2682 3224584 - 3224153 - | hypothetical protein TERM 5112 3224390 - 3224369 - G 72 -5.7 -4.41348 | overlap 3224372 CGCCCTGGAAATAAA GGAGGCCAG GGGG CCGGCCCAC CCCTTGACCGTGATG Dole_2683 3227530 - 3224789 - | von Willebrand factor type A TERM 5113 3225407 - 3225425 + g 76 -3 -4.87665 | GATATAGATCCTTTC GGACGG GGTTTTG CCGGCC TTTTTGTCAATCACA TERM 5114 3225787 - 3225759 - G 74 -11.6 -3.54459 | opp_overlap 3225759 3225764 3225778 3225780 TCAATGCCCGGTAAA CCGGGGCCGGCA CCGCT TTCCGGTCCCGG TTCATGCGCCTGGGG TERM 5115 3225759 - 3225787 + g 79 -13.8 -3.15544 | opp_overlap 3225759, overlap 3225764 3225778 3225780 TCAATGCCCGGTAAA CCGGGGCCGGCA CCGCT TTCCGGTCCCGG TTCATGCGCCTGGGG TERM 5116 3226000 - 3225967 - G 83 -7.9 -4.56775 | opp_overlap 3225985 3225987, overlap 3225985 AGGCCCTGGCAAAAA GCGCGGGCCGCAGGC AAAG GCCCAGGGCCGGGGC CATGGATCTGTATTC TERM 5117 3226001 - 3225985 - G 72 -9.3 -3.64703 | opp_overlap 3225985 3225987, overlap 3225967 CGGGCCGCAGGCAAA GGCCCAG GGC CGGGGCC ATGGATCTGTATTCG TERM 5118 3226340 - 3226330 - G 80 -2.4 -5.30575 | CAAAAATGGAAAAAA GGTC GGC GGCC AGGCCGGTGTGGGGA TERM 5119 3226595 - 3226567 - G 76 -4.6 -4.82901 | gap 1, overlap 3226569 TGTCGGCCAGAAAAA TG-GTCTTCCCGT CGGA ACAGGCAGACACA TCAGGTGAATTCGAA TERM 5120 3227183 - 3227135 - G 71 -12.6 -2.7083 | opp_overlap 3227109, overlap 3227132 3227131 CAGGGCATAAAGCCA CCGGGC-CTTGATCCGGTTCACGG CGG CCATGAACCGG-TCAAACAGCCGG GAATCGGGGTGAAGC TERM 5121 3227424 - 3227441 + g 83 -5.5 -5.00616 | opp_overlap 3227419 3227418 GCCTTCAAATCGCAT CCGGC CTTGTCCA GCCGG TTTTTTACCCGGCGG TERM 5122 3227668 - 3227644 - R 70 -10 -3.17714 | overlap 3227647 3227662 GCAAAGCCCGAGGAA TGAGGCGTAC TGAAT GTACGCCGCA GTGACGAGGGATGCC TERM 5123 3227665 - 3227647 - R 71 -10.3 -2.78395 | overlap 3227644 3227662 AAGCCCGAGGAATGA GGCGTAC TGAAT GTACGCC GCAGTGACGAGGGAT Dole_2684 3228557 - 3227718 - | ATPase TERM 5124 3229330 - 3229318 - g 78 -6.3 -4.57569 | CCATGCTGCGAAAAA TCATC ATC GATGA ACGGGACCAGTACCT Dole_2685 3228750 - 3229913 + | TraB family protein Dole_2686 3230124 - 3232325 + | type IV pilus assembly PilZ Dole_2687 3232502 - 3232816 + | anti-sigma-factor antagonist TERM 5125 3232890 - 3232864 - T 100 -18 -5.85178 | opp_overlap 3232864 AATACCTAAAAAAAA CGCCGCCGGCAT ATG ATGCCTGCGGCG TTTCCTGTTTCCATG TERM 5126 3232864 - 3232890 + T 100 -18 -4.01603 | opp_overlap 3232864 AATACCTAAAAAAAA CGCCGCCGGCAT ATG ATGCCTGCGGCG TTTCCTGTTTCCATG Dole_2688 3234136 - 3232949 - | hypothetical protein TERM 5127 3233087 - 3233072 - G 86 -4.6 -5.29782 | overlap 3233061 3233074 CATACCGATAAAAAA CGGCGT CATC ATGCCG CAGGGGGGGACGGCA TERM 5128 3233191 - 3233206 + g 90 -6 -5.2422 | opp_overlap 3233175 3233174, overlap 3233175 CCGAAACCCAGTACC GGCCGG TTTT CAGGCC TTTTTTGATGTCGTT TERM 5129 3233796 - 3233808 + g 73 -3.3 -4.82901 | opp_overlap 3233785 AACACCAGCACTTCA CTGGT GGG GCCGG TTTTTATCGGCAGGG TERM 5130 3234873 - 3234860 - g 77 -2.4 -5.14563 | CTGCCGATCAAAAAA CGAA TAAAGG TTCG GATGCCGGCACTTTG TERM 5131 3235636 - 3235622 - g 79 -7.1 -4.63218 | opp_overlap 3235630 TCCGGTTCAACAAAA TGCCG GTGGT CGGCA ACGACTTTTATCCCT TERM 5132 3235630 - 3235641 + G 72 -5.8 -4.4715 | opp_overlap 3235622 AACAAAATGCCGGTG GTCG GCAA CGAC TTTTATCCCTTAAAC Dole_2689 3234361 - 3236391 + | SH3 type 3 domain-containing protein Dole_2690 3240521 - 3236388 - | hypothetical protein TERM 5133 3236864 - 3236847 - G 89 -6.3 -5.0538 | gap 1, overlap 3236850 GTTGATCTGAAAAAA GACCGACG CAT CGT-GGTC GTAATACCGCCGGTT TERM 5134 3237067 - 3237044 - G 79 -13.2 -3.32343 | gap 1 CCCAGAGCGCCAGAA TGGTCACCCGG TCA CCGGGTG-CCA GGGCAGTGCCGGACA TERM 5135 3238292 - 3238282 - G 74 -8.2 -4.15453 | opp_overlap 3238281 3238279 3238282 TAAGTCAGGGGAAAA GCCG TAC CGGC ATATGTTTTAAATCC TERM 5136 3240167 - 3240145 - G 78 -7.7 -4.46581 | overlap 3240146 TAAAACCCCAGAAAA TCCCCGG TATCCAGGG CCGGGGA ATCAGAAAAATTGTT TERM 5137 3240363 - 3240350 - G 75 -3.7 -4.82901 | opp_overlap 3240350, overlap 3240351 CCGCTGCCACAAAAA TCGGC CCGC GCCGC TCACTTCCCGGGATG TERM 5138 3240500 - 3240477 - G 72 -6.6 -4.31835 | overlap 3240480 AAGGCTGACAACAAA TAACGCGCCC CACA GCGCGCGCCA TGTCCCGTTTGAATG TERM 5139 3240497 - 3240480 - G 77 -8.3 -4.27512 | overlap 3240477 GCTGACAACAAATAA CGCGCCC CACA GCGCGCG CCATGTCCCGTTTGA TERM 5140 3240652 - 3240663 + r 76 -2.2 -5.24129 | overlap 3240643 TTTGGACAAACCCGG GCAG GGTA TTGC TTTTTTGTCGGAGGC Dole_2691 3241712 - 3240939 - | cell wall hydrolase/autolysin TERM 5141 3241267 - 3241301 + g 78 -14.2 -2.62184 | opp_overlap 3241259 GTCAGAAGGCTGTCG GGCGGCAGCCCCCTGT AAA ACACGGTGATGCCGCC TGATGTGGAAGAAAA TERM 5142 3241328 - 3241317 - G 79 -7.2 -4.64676 | opp_overlap 3241323, overlap 3241318 3241319 TGATGTGGAAGAAAA GCCG CCGC CGGC GTGAAGGCTGACAAA TERM 5143 3242438 - 3242409 - g 86 -5.6 -5.03314 | overlap 3242411 3242433 3242435 CTGACCCTTAAAAAA CCCCTCTACGCC TGCACC GACGAAGAGGTG GACCACCAGCTCACG TERM 5144 3242528 - 3242517 - g 70 -2.2 -4.72272 | CCCGCGCAGGAAAAA GACG CGGC CATC ATCGACTACCAGGCC Dole_2692 3242028 - 3243359 + | trigger factor TERM 5145 3243672 - 3243688 + G 78 -7.9 -4.46212 | overlap 3243665 3243686 GTGTGCATCGGCCAT GCGGCCA GCA TGGGCGC TTTTCTGCTGGCGGC Dole_2693 3243387 - 3244004 + | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 5146 3244239 - 3244209 - g 100 -12.6 -5.04175 | overlap 3244210 CCAAGGAGATAAAAA CCCTGCTGGACGAC TAC GTCATCGAGCAGGA GCGGGCCAAGAAGGC TERM 5147 3244238 - 3244210 - g 83 -13.9 -3.61421 | overlap 3244209 CAAGGAGATAAAAAC CCTGCTGGACGAC TAC GTCATCGAGCAGG AGCGGGCCAAGAAGG TERM 5148 3244376 - 3244396 + G 72 -8.9 -3.87815 | overlap 3244390 TGCGGCAAGACCCTG CTGGCCCAG ACC CTGGCCCGG TTTCTGAACGTGCCG TERM 5149 3244852 - 3244834 - g 81 -3.1 -5.24799 | overlap 3244840 3244843 TGAGAAAGACAAAAA CTACAAC CAGTC GCTGCAG CTGGTGGAGCCCCAG Dole_2694 3244007 - 3245260 + | ATP-dependent protease ATP-binding subunit TERM 5150 3245905 - 3245894 - g 72 -5.8 -4.51224 | AACATCAAGAACAAA CAGC GGCT GCTG GAAGAGGCGGACCTG TERM 5151 3247308 - 3247268 - g 73 -11.2 -3.40371 | gap 2, opp_overlap 3247268 3247303 GACGTGATGAAGGAA TCGGCCCAGG-CCGC-CGTA AGC TACGTACGGTCCCGGTCCGA TCAGTTTAAAATTGA TERM 5152 3247456 - 3247445 - g 71 -7.2 -4.24342 | GCCCTGACCAAGAAA CCGG TCTA CCGG AACCTGGCCATGACC TERM 5153 3247695 - 3247676 - g 86 -12.1 -4.07885 | GATCTGGCCTTAAAA CCGGCGG ATTCAG CCGCCGG CGACCCGGCACCGCC Dole_2695 3245324 - 3247759 + | ATP-dependent protease La TERM 5154 3247898 - 3247912 + T 85 -11.4 -3.64371 | GTTCAAGCCCTGTTC CGCCCA CCA TGGGCG TTTAACCTGTCAGTT TERM 5155 3248048 - 3248014 - T 100 -17.3 -3.21934 | opp_overlap 3248019, overlap 3248019 CTCCCGCCACAAAAT CAAAAGGGCCTGGAG AATTA CTCCAGGCCCTTTTT TGTTTAATGTCTGAA TERM 5156 3248019 - 3248043 + T 100 -17.2 -5.69793 | opp_overlap 3248014 3248019 GCCACAAAATCAAAA GGGCCTGGAG AATTA CTCCAGGCCC TTTTTTGTTTAATGT TERM 5157 3248043 - 3248019 - T 100 -17.2 -4.73108 | opp_overlap 3248019, overlap 3248014 GCCACAAAATCAAAA GGGCCTGGAG AATTA CTCCAGGCCC TTTTTTGTTTAATGT Dole_2696 3250659 - 3248071 - | ATPase TERM 5158 3248703 - 3248731 + g 72 -6 -4.28375 | gap 1 CCACGTATCCCGGAG GCGCGCCGATG AGACGGGC CA-CGGCGTGC TTTTCCATGTATTCG TERM 5159 3248900 - 3248853 - G 70 -11.8 -2.82488 | overlap 3248852 3248848 GAAAGATAAAGGAAC CGATGGGCCGGTTGGGGTCCTG AAGC CCGGACCGGGACCGGCGCACCG CGTCGGACACAGCGG TERM 5160 3249535 - 3249559 + g 100 -14.2 -4.1891 | GCGGTCGGACAGGGT GGCCGCCGCC ACCAG GGCGGCGTCC TTTATCTTGACCCCG TERM 5161 3250599 - 3250557 - G 70 -3.9 -4.63527 | gap 1 CCAGCATGGCAAAAA GCAGGTGCTCGGGTTCGATC TGCT GGT-GACCCCGGGCGCCGGC ATCGGACTGGGCCGC Dole_2697 3251438 - 3250950 - | SsrA-binding protein TERM 5162 3251116 - 3251132 + g 78 -3 -5.15969 | overlap 3251117 GAGTAGCCCTTTTCA TTGATC TTGCC GATCAG TTTTTTCAGTTCCCG Dole_2698 3253227 - 3251452 - | phosphoenolpyruvate-protein phosphotransferase TERM 5163 3251793 - 3251779 - G 71 -10 -3.5936 | overlap 3251782 GTGAAAGGTCTGAAA CAGGTG GGC CACCTG GCGGTTGCCCCGGTC Dole_2699 3253515 - 3253234 - | phosphotransferase system, phosphocarrier protein HPr TERM 5164 3253460 - 3253484 + g 86 -5.7 -5.08169 | GCCCTGGCGTGAAGC CCGAGTTCATT GAC AATGGATACGG TTTTTTCAAGTGTGT TERM 5165 3255170 - 3255183 + G 72 -9.5 -3.63744 | opp_overlap 3255169, overlap 3255168 CTGGCTGCAAGCGAG GCCCG ATTC CGGGC TGTTTTCGAAAACGC TERM 5166 3255401 - 3255388 - g 93 -8.1 -5.24129 | CGGGTCGATAAAAAA CCGTG AGGC CACGG TGACACGAAAGGACG TERM 5167 3256121 - 3256135 + G 74 -11.4 -3.53012 | TCCGCCGATCTCACC GGCCAG CTT CTGGCC TTTGCCCGCAAACAG TERM 5168 3256546 - 3256520 - g 84 -3.6 -5.1861 | overlap 3256533 TTCACCACCAAAAAA CAGGGCAAGG GAACCGG CCTGGGCCTG GCCACGGTGTACGGC Dole_2700 3253775 - 3257083 + | PAS/PAC sensor hybrid histidine kinase TERM 5169 3257118 - 3257138 + F 100 -8.9 -5.24531 | CCTTTCGTATTTCAA GCCGGCATT CAG GACGCCGGC TTTTTTATAGACAGT TERM 5170 3258566 - 3258550 - g 87 -3.6 -5.40072 | overlap 3258554 CGCGCCTGAAAAAAA CCGACA CCGGC TGGCGG GTGGAGGGAGACCCC Dole_2701 3257355 - 3260078 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Dole_2702 3261581 - 3260130 - | hypothetical protein TERM 5171 3260358 - 3260327 - G 76 -7.2 -4.45664 | GCAACGTAATCAAAA CCAGTTGCGGCGAA AGGG TTTGCCGAACCTGG GGAAAGTAGGTCTCT TERM 5172 3260414 - 3260390 - G 70 -4.1 -4.56597 | overlap 3260393 3260394 TTCTCCTTTTAAAAA GGAGCAGCGGC AGG GCCAGTGCCGC GGTAACCATCAGCCA TERM 5173 3261483 - 3261467 - G 76 -3.5 -4.91109 | overlap 3261468 3261470 GGGCCATGATAAAAA GCAGGCC CAT GGCCGTC ACATGCACAACAACC TERM 5174 3261727 - 3261717 - H 71 -2.6 -4.88736 | GAGTATTTATAAAAA TTTA TGA TAAA AAATTTTAAAATGCC TERM 5175 3261962 - 3261952 - H 74 -4 -4.88258 | opp_overlap 3261961, overlap 3261954 3261961 AAAATGACAATAAAA GATT TGA AATC AAAAATCCATTTTGA Dole_2703 3262117 - 3262782 + | hypothetical protein TERM 5176 3263443 - 3263432 - g 100 -4.4 -5.75945 | ACTCGTTAAAAAAAA TACC TGAA GGTA AAAGAAACGACACGC TERM 5177 3264679 - 3264666 - g 83 -5.3 -4.88217 | opp_overlap 3264666 ATTAAAAAATGAAAA CATCA AGAT TGATG TCCCTTTGCCACGCA Dole_2704 3262819 - 3265059 + | bifunctional DNA primase/polymerase Dole_2705 3265902 - 3265375 - | hypothetical protein Dole_2706 3266443 - 3265928 - | hypothetical protein TERM 5178 3266007 - 3266017 + g 75 -4 -4.77036 | GTAGACATCTTCCTT CTAT GCC ATAG TTTTTCATAATAAGA Dole_2707 3267139 - 3266606 - | hypothetical protein Dole_2708 3267666 - 3267478 - | hypothetical protein TERM 5179 3267749 - 3267710 - R 71 -7.2 -4.07568 | gap 1, opp_overlap 3267716 3267718, overlap 3267718 TTGTTGCTTCCAAAA CGCAGAAAGCCGCCCCAGA CTA TCTGGAACGGCTCTTT-CA TTGCTCTAAACGTTT TERM 5180 3267716 - 3267744 + r 71 -7.3 -3.98282 | opp_overlap 3267710 3267718, overlap 3267718 CTTCCAAAACGCAGA AAGCCGCCCCAGA CTA TCTGGAACGGCTC TTTCATTGCTCTAAA TERM 5181 3267742 - 3267718 - R 100 -14.3 -4.06179 | opp_overlap 3267716 3267718, overlap 3267710 TCCAAAACGCAGAAA GCCGCCCCAGA CTA TCTGGAACGGC TCTTTCATTGCTCTA TERM 5182 3267718 - 3267742 + r 74 -9.9 -3.57915 | opp_overlap 3267718 3267710, overlap 3267716 TCCAAAACGCAGAAA GCCGCCCCAGA CTA TCTGGAACGGC TCTTTCATTGCTCTA Dole_2709 3268410 - 3267778 - | integrase family protein TERM 5183 3268270 - 3268280 + g 100 -4.6 -5.66926 | AATTACCATCCATTC TCGG ATA CCGG TTTTATTTTTTTTGC TERM 5184 3268438 - 3268468 + r 79 -10.5 -3.75461 | gap 1, opp_overlap 3268440, overlap 3268440 CCCTATAAAACACAA AAGCCGCTACGACA TTTC TGTCGT-GCGGCTA TTTGGTAACAATTTC TERM 5185 3268440 - 3268466 + r 89 -13.1 -3.45592 | gap 1, opp_overlap 3268440, overlap 3268438 CTATAAAACACAAAA GCCGCTACGACA TTTC TGTCGT-GCGGC TATTTGGTAACAATT TERM 5186 3268466 - 3268440 - R 100 -13.1 -4.94487 | gap 1, opp_overlap 3268440 3268438 CTATAAAACACAAAA GCCGCTACGACA TTTC TGTCGT-GCGGC TATTTGGTAACAATT Dole_2710 3269823 - 3268768 - | hypothetical protein TERM 5187 3269940 - 3269917 - R 100 -10.2 -4.84529 | CCATAAACGCAAAAA GCCACACGGC AATA GTCGTGCGGC AAATAATAAAAATTG Dole_2711 3270497 - 3270159 - | XRE family transcriptional regulator Dole_2712 3270715 - 3270957 + | hypothetical protein TERM 5188 3270977 - 3271002 + F 100 -11.9 -4.65895 | opp_overlap 3270977 3270979 AAAGCAACTTAAAAA GTCGGACTGTC GTAG GATAGTCCGGC TTTTTCAATGAGAGG TERM 5189 3271002 - 3270977 - f 83 -7.5 -4.788 | opp_overlap 3270977, overlap 3270979 AAAGCAACTTAAAAA GTCGGACTGTC GTAG GATAGTCCGGC TTTTTCAATGAGAGG Dole_2713 3271028 - 3272623 + | hypothetical protein TERM 5190 3272693 - 3272720 + T 100 -12.8 -4.7329 | opp_overlap 3272693 TAAGGTGAAAAAAAA GCTGGGTTGTCT TTTC AGATAGCCCAGC TTTTTAAATAATTTT TERM 5191 3272720 - 3272693 - T 100 -8.4 -5.81032 | opp_overlap 3272693 TAAGGTGAAAAAAAA GCTGGGTTGTCT TTTC AGATAGCCCAGC TTTTTAAATAATTTT Dole_2714 3273078 - 3272746 - | hypothetical protein Dole_2715 3273376 - 3274812 + | hypothetical protein TERM 5192 3275174 - 3275160 - f 75 -3.6 -5.08601 | TTACCCTAACAAAAA CTAAAC GAA ATTTAG TCAGCCGAACAACCC Dole_2716 3275210 - 3275848 + | TetR family transcriptional regulator TERM 5193 3276321 - 3276309 - g 76 -3.3 -5.01546 | AAATTGACAGAAAAA CTGGA GAG TCCTG GGTGCTTTATCCTGG Dole_2717 3276074 - 3276832 + | hypothetical protein TERM 5194 3277468 - 3277443 - g 75 -5.6 -4.62302 | gap 1 CAAGATTTTGAAAAA GCC-CTTTTTT GGACA AAAAAAGCGGC TGAACAGGGGGGGAA Dole_2718 3277263 - 3278027 + | Sel1 domain-containing protein Dole_2719 3280196 - 3279237 - | hypothetical protein Dole_2720 3281297 - 3280197 - | hypothetical protein TERM 5195 3282126 - 3282113 - g 70 -2.3 -4.83615 | CAGCTTGCAGAAAAA CATGG AAGG CCCTG GCTCCATATTGATTT Dole_2721 3281813 - 3282268 + | hypothetical protein Dole_2722 3282442 - 3283032 + | hypothetical protein TERM 5196 3283099 - 3283059 - T 88 -14.2 -2.72227 | gap 2, opp_overlap 3283056 3283055 3283052 AACATGCCCTAACGA CCTGCTC-AGTGG-CGGC GCTTTTT GCCGTCCACTGGAGCAGG AAGGTTAGTAGCTTT Dole_2723 3283396 - 3283115 - | hypothetical protein TERM 5197 3284887 - 3284842 - g 73 -3.1 -4.7261 | gap 1, overlap 3284843 3284882 ATCGAGCAAAAGAAA CGCGACTTCCTGCTGGTGATGG CTA CCGGCACCGGCAAAACG-CGCA CCAGCATCGCCATGG TERM 5198 3286912 - 3286950 + G 72 -5.1 -4.60487 | gap 1, opp_overlap 3286925, overlap 3286913 GCGTTTGAGCAGTTT ATCCAGCAGCACAGCAGC CTCA GCAGCCG-GCAGCTGGAG TTTTTGAACCTGCTC Dole_2724 3284305 - 3287115 + | type III restriction protein res subunit TERM 5199 3287410 - 3287399 - g 75 -3.6 -4.72486 | overlap 3287401 3287407 GACAAACCGGAAAAA GAGC AAAA GCCC TTTGCCGTCAAAAGA TERM 5200 3287426 - 3287407 - g 72 -5 -4.60746 | overlap 3287399 3287401 GGAAAAAGAGCAAAA GCCCTTTG CCGT CAAAAGAC ATACCCTGCGCTGGA TERM 5201 3288250 - 3288239 - g 87 -7.2 -5.00616 | opp_overlap 3288241, overlap 3288240 3288241 CGTCTGCTGAAAAAA GGCG GCAC CGCC TGCGTCATCGTGCCG TERM 5202 3288277 - 3288241 - g 73 -12.9 -2.75708 | opp_overlap 3288241, overlap 3288239 3288240 TCTGCTGAAAAAAGG CGGCACCGCCTGCGTCA TCG TGCCGCAAGGGGTGCTG TTCGGTTCTGGCAAG TERM 5203 3288241 - 3288277 + G 79 -12.9 -3.23274 | opp_overlap 3288239 3288241 3288240 TCTGCTGAAAAAAGG CGGCACCGCCTGCGTCA TCG TGCCGCAAGGGGTGCTG TTCGGTTCTGGCAAG Dole_2725 3287159 - 3288823 + | N-6 DNA methylase TERM 5204 3289796 - 3289818 + G 72 -4.8 -4.6468 | opp_overlap 3289798 3289801, overlap 3289801 TGCCAGTCATTAGAC CACAATCCGA TGA TCGGATTAAG TTTTCTGTAATTTCA Dole_2726 3288820 - 3290322 + | restriction modification system DNA specificity subunit TERM 5205 3290449 - 3290463 + G 71 -7 -4.12532 | opp_overlap 3290447 GAGTCACAGGAAGCG CAGGGC TTT GCCCCG TTTGTCTGTGCCGGC TERM 5206 3291619 - 3291602 - g 75 -5.5 -4.63218 | overlap 3291613 TCTGGCTCAAGAAAA CCGGC GTTAAAGA GCCGG TGCTGCTCAAATCCC Dole_2727 3290335 - 3292140 + | ABC transporter TERM 5207 3292511 - 3292522 + G 72 -5.8 -4.43208 | TCAGGGACTTTGTGA GCAG CTTG CTGC TTTCTTTAAAGGTCT Dole_2728 3292140 - 3293225 + | hypothetical protein Dole_2729 3293917 - 3293339 - | ribonuclease H Dole_2730 3295128 - 3294871 - | hypothetical protein Dole_2731 3295673 - 3295143 - | hypothetical protein TERM 5208 3295297 - 3295283 - G 80 -2.1 -5.20333 | overlap 3295288 GAGCCAGAAGAAAAA CAACA TGAGG CGTTG AAAACGCTTCAACAA TERM 5209 3295864 - 3295875 + r 70 -2.2 -4.86773 | TAATCGTTTATGTCT CCGA AGTA TTGG TTTTTCATAATTTTA TERM 5210 3295924 - 3295936 + r 80 -6.3 -4.69415 | TCACTGGTTGCAGGG GTTTC CCA GAAAC TTTGTTTGTATTCAT TERM 5211 3296002 - 3296020 + r 76 -2.4 -5.27399 | CCCCCCTGCAATCCA GTGAAACA CCA TGTTATAC TTTTTTCGTGTATTC Dole_2732 3296989 - 3296015 - | hypothetical protein TERM 5212 3298278 - 3298320 + H 88 -2.3 -5.81412 | gap 2 AAAAACGTTTATGAA TCTGGATGTCA--AGAACT CGTTAAC AGTTCTGATGATGTCCAGA TTTTTTTTGGGTAGC TERM 5213 3298586 - 3298570 - H 77 -10.1 -3.58726 | opp_overlap 3298557 TCTTGCCATAGATAA TGGGGAG CGC CCCCCCA CTGTCAAAGACAATA TERM 5214 3299530 - 3299516 - g 100 -3.5 -6.25578 | ATCAAAGAAAAAAAA GGCTC CTGGC AAGCC ACCCCATAAGAAAAC Dole_2733 3299028 - 3299780 + | hypothetical protein TERM 5215 3300513 - 3300498 - g 73 -3.2 -4.7908 | overlap 3300500 AAAAAGAGAAAGAAA TAGCGA AGAA CCGCCA GAGATATTCTTCCCC TERM 5216 3300961 - 3300948 - g 73 -3.1 -4.83615 | gap 1, overlap 3300956 CAGGGGCGAGAAAAA GCGAGA TAT TC-CGC TGGAAATGGGCTGAA Dole_2734 3300371 - 3301465 + | integrase family protein Dole_2735 3303191 - 3301659 - | Mg chelatase, subunit ChlI TERM 5217 3302383 - 3302408 + g 86 -8.9 -4.56597 | opp_overlap 3302383 TGAGGGGCGCGAAAA GGCCGGGCCGT CACC AGGGCCTGGTC TTTTTCCAGCCGGCC TERM 5218 3304011 - 3304024 + G 72 -5.2 -4.4767 | opp_overlap 3304011 ACGACATCAGCAAAG CCCG CACCTT CGGG TTTTATCATGAATAC Dole_2736 3303452 - 3304345 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 5219 3304500 - 3304450 - f 71 -4.5 -4.49337 | gap 1, opp_overlap 3304458 3304458, overlap 3304453 3304495 CAAGATCAAGGAAAA CAAGGGCTGACGCG-GAGGCGTAC TGTT GTACGCCGCACAAGGAAGCCCGCG GTTTGACGCAGAGAT TERM 5220 3304497 - 3304453 - f 76 -7 -4.34008 | gap 1, opp_overlap 3304458 3304458, overlap 3304450 3304495 GATCAAGGAAAACAA GGGCTGACGCG-GAGGCGTAC TGTT GTACGCCGCACAAGGAAGCCC GCGGTTTGACGCAGA Dole_2737 3304603 - 3305175 + | hypothetical protein TERM 5221 3305983 - 3305946 - g 77 -2.2 -5.03715 | gap 3 ACGATCTGCAAAAAA CCGGC--ATGGAAACAGAC ACG GT-TTTTTCCATCAGCCGG GATCTGCCCGCCGGT TERM 5222 3307288 - 3307313 + G 74 -11.1 -3.53012 | CATGAAGGTGGTGCT GACCTTTGCCG ATAC CGGCAGAGGGC TTTCCGAGGCGGCGA Dole_2738 3305237 - 3307486 + | PAS/PAC sensor signal transduction histidine kinase TERM 5223 3307846 - 3307827 - g 70 -4.2 -4.66609 | overlap 3307828 3307844 GATTTTATTGAAAAA CCCCTGTC CATT GACAAGGT CATCGTGGCCATTCA TERM 5224 3308696 - 3308686 - g 77 -2.4 -5.06103 | overlap 3308687 ACAACCCGGAAAAAA CGCC GCC GGCC CTTCCCGTGGCCGAA Dole_2739 3307518 - 3308873 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 5225 3309365 - 3309351 - g 72 -5.6 -4.4831 | ACTCACGAAAAACAA CAGCCG AGG CAGCCG CCTGTGACGGACGCG Dole_2740 3308879 - 3309502 + | putative methyltransferase TERM 5226 3309495 - 3309515 + F 79 -11.1 -3.53012 | ACCACACCCATGACG CCGGTTGAC GCG GACAACCGG TTTGCACAAGGAGAG Dole_2741 3309536 - 3310042 + | pantetheine-phosphate adenylyltransferase Dole_2742 3310704 - 3310039 - | protein-L-isoaspartate O-methyltransferase TERM 5227 3310607 - 3310576 - G 75 -9.4 -3.85698 | gap 1, overlap 3310578 3310579 GGCCTCGCTGACAAA CAGGTGCC-TGGGCA CCG TGCCCATGGCGCCCA GCACAAAAGGGTCGT TERM 5228 3310605 - 3310578 - G 77 -12 -3.51934 | gap 1, overlap 3310576 3310579 CCTCGCTGACAAACA GGTGCC-TGGGCA CCG TGCCCATGGCGCC CAGCACAAAAGGGTC TERM 5229 3311112 - 3311126 + G 81 -8.6 -4.30978 | GGGCCGGCCGGGTCT TCACCA TGG TGGTGA TTTTCCTGGGTTACG TERM 5230 3311246 - 3311235 - g 72 -4.4 -4.67011 | AATTGGATTCAAAAA TCAG ACGG CTGA GAAACCACTATATTG Dole_2743 3310928 - 3311929 + | TrkA domain-containing protein TERM 5231 3311973 - 3311939 - T 93 -2.7 -5.9873 | overlap 3311941 GCATGACAAAAAAAA GCCTGCCGGTTTCAG TAGTG CCGATACCGACATTC AGACTCACTTGCGGG Dole_2744 3312624 - 3312037 - | 5-formyltetrahydrofolate cyclo-ligase TERM 5232 3312193 - 3312216 + g 70 -2.3 -4.72272 | opp_overlap 3312191, overlap 3312201 TTTGTCGTAATAACC GGTGCCC AGGCCGATGC GGGCCCC TTTTTCATCAAACAC TERM 5233 3312584 - 3312600 + g 76 -3.5 -4.99947 | opp_overlap 3312584, overlap 3312586 ATTTTTTTTACCACA CCGGCGC TGA GCCCCTG TTTTATTTCCTTGAC TERM 5234 3312773 - 3312788 + H 75 -11.8 -2.71924 | opp_overlap 3312762, overlap 3312772 AAAACCCTTGCCGGA CGGCCC ACCA GGGCCG GTTTCGACAAAACTC Dole_2745 3312836 - 3314113 + | seryl-tRNA synthetase Dole_2746 3314110 - 3315615 + | threonine synthase TERM 5235 3315882 - 3315872 - g 70 -2.4 -4.84359 | CGAGTCTTACAAAAA GGCC ATT GCCC TCAAACCGGACTTTG TERM 5236 3316265 - 3316277 + G 80 -10.5 -4.07568 | opp_overlap 3316258 3316265 3316267 CGGCAACATGAAAAA GGCGG AGG CCGCC TTTTCCCAGGCCGCA TERM 5237 3316277 - 3316265 - g 100 -10.5 -4.87626 | opp_overlap 3316265, overlap 3316258 3316267 CGGCAACATGAAAAA GGCGG AGG CCGCC TTTTCCCAGGCCGCA Dole_2747 3315612 - 3316358 + | TPR repeat-containing protein Dole_2748 3317201 - 3316539 - | abortive infection protein TERM 5238 3316749 - 3316737 - G 72 -4.7 -4.56597 | CGGCCGCGCGAAAAA CCGCG ACA CCCGG TGAATGAACCCCCGA TERM 5239 3316923 - 3316896 - G 87 -9.2 -4.57073 | overlap 3316898 CAGGGCTTCGAAAAA CTTGTAGGTGTA CTTG TACACCCACAGG TTGAGCGGGCAGAAG Dole_2749 3318297 - 3317281 - | D-alanine--D-alanine ligase TERM 5240 3317751 - 3317729 - G 78 -4.1 -5.00616 | gap 1, overlap 3317730 CGGCCGTCTAAAAAA GGCTGAACCA GGGC CGGCTC-GCC AAAGGTGGCCATCAC TERM 5241 3318455 - 3318467 + r 81 -3.3 -5.5208 | CGCAACGTCTGGCAT CAGCG CCA CGGTG TTTTTTGTGTTCTGC Dole_2750 3318843 - 3318514 - | HicB family protein Dole_2751 3319087 - 3318827 - | hypothetical protein TERM 5242 3318937 - 3318951 + g 90 -10 -4.61199 | TGTTTATTCTTGGAT CACCCT GCC AGGGTG TTTTGTATATCCGGT TERM 5243 3318962 - 3318972 + g 76 -4.6 -4.77165 | GGGTGTTTTGTATAT CCGG TGA CTGG TTTTCTTCTGGCGAG TERM 5244 3319416 - 3319431 + r 90 -9 -4.56597 | opp_overlap 3319390 CCCATTGCGGCGCAG TCACGC ATCG GCGTGA TTTTTCCGAAGAGAG TERM 5245 3319512 - 3319458 - R 100 -17.8 -3.05935 | AGAGCGGGCAGGTAA TGTAGGGGCGGCCGGCGGCCGCCC GACTGAT GGGCAACCACAGGTTGCCCCTACA AAAACGCCGCAGGCG TERM 5246 3319527 - 3319517 - R 88 -8.2 -4.82901 | opp_overlap 3319517 TTGCCCCTACAAAAA CGCC GCA GGCG TGACTTCCCTCGCGC Dole_2752 3319871 - 3319575 - | hypothetical protein Dole_2753 3320140 - 3319868 - | hypothetical protein Dole_2754 3321383 - 3320556 - | short-chain dehydrogenase/reductase SDR TERM 5247 3320631 - 3320664 + g 75 -8.8 -4.08557 | gap 1, opp_overlap 3320625 3320623 3320628 CTTTAAATACCACTG GGCCCATGCTTCCGG CCCCA CCGGCACCA-GGGCC TTGTTCTTTCGAACA TERM 5248 3321648 - 3321631 - g 71 -6.9 -4.12475 | CAGACAGCAGACAAA GACGGCC TCAC GGTCGTC TCCACCCACATCAAC TERM 5249 3321868 - 3321828 - g 81 -12.7 -3.55761 | gap 1, overlap 3321864 3321865 3321867 GATCGACGGGCCAAA GGT-CTCCCGGCTGGTGC TGGTGG ACACCAGCCAGAAGGACC GCATCGGGAAAGCGG TERM 5250 3323076 - 3323058 - g 72 -4.5 -4.61231 | gap 1, overlap 3323059 GGACATTCTCAAAAA CGCGGGCA ACAC CGCC-GCG GAGCTGGAATACAGC Dole_2755 3321610 - 3324300 + | CBS domain-containing protein Dole_2756 3324679 - 3325377 + | peptidase M50 TERM 5251 3326354 - 3326336 - g 83 -8.1 -4.66609 | gap 1, overlap 3326337 3326338 GACGGCACCCAAAAA GCCCGGGC CGTG GCCCGG-C AGACCATGGAAGCGG Dole_2757 3325403 - 3326392 + | tryptophanyl-tRNA synthetase TERM 5252 3326588 - 3326603 + G 70 -4.6 -4.55287 | opp_overlap 3326586 3326588 TGAAGCTGATGAACA TCGACG TGGC CGGCGA TTTTCTCTACATGGC Dole_2758 3326389 - 3327135 + | chromosome segregation and condensation protein ScpA TERM 5253 3327983 - 3327968 - g 75 -5.4 -4.66953 | overlap 3327972 3327973 TGAAGACGGTAAAAA CGAACC GCCG GATTCG ACGCCTACCGGGGAA Dole_2759 3327132 - 3328031 + | segregation and condensation protein B Dole_2760 3328268 - 3328792 + | cyclic nucleotide-binding protein TERM 5254 3328878 - 3328851 - g 100 -9.8 -5.52384 | opp_overlap 3328850 3328849 3328847 GCCGCACGAAAAAAA GACCGTCTCCTT TTCC AGGGAGGCGGTC AATGTCTTTTTTCAC TERM 5255 3329764 - 3329748 - g 79 -13.7 -3.14132 | opp_overlap 3329742 3329742 GGGGTGCGTGATGAA CCGGCTG GTG CAGCCGG GCAACCTTTCCTGGC TERM 5256 3329830 - 3329861 + G 100 -21.6 -2.87132 | opp_overlap 3329830, overlap 3329832 TGCATGTTAAAAGAA GAGGTGCGGCCCGG CAAG CCGGACCGCACCTC TATCTGAGACACCGG TERM 5257 3329861 - 3329830 - g 100 -23.8 -4.19746 | opp_overlap 3329830 3329832 TGCATGTTAAAAGAA GAGGTGCGGCCCGG CAAG CCGGACCGCACCTC TATCTGAGACACCGG TERM 5258 3329832 - 3329859 + G 100 -18.4 -2.98823 | opp_overlap 3329830, overlap 3329830 CATGTTAAAAGAAGA GGTGCGGCCCGG CAAG CCGGACCGCACC TCTATCTGAGACACC Dole_2761 3328822 - 3329868 + | radical SAM domain-containing protein TERM 5259 3329923 - 3329903 - T 89 -12.6 -3.53444 | overlap 3329883 3329882 TGATGGCCCGTCAAA GGGCGAAC ACAAG GTTCGCCC CTACCGTATTTGCGA Dole_2762 3331224 - 3330001 - | hypothetical protein Dole_2763 3332134 - 3331280 - | substrate-binding region of ABC-type glycine betaine transport system Dole_2764 3333083 - 3332247 - | binding-protein-dependent transport systems inner membrane component TERM 5260 3332432 - 3332470 + g 79 -13.3 -3.04144 | gap 1, overlap 3332402 3332399 CCACCATGGACAGTG CCAGCATGATGGTCTGGT TGAT ACCGG-CCATCATGGTGG TCTTGGCAATGGGCA TERM 5261 3332888 - 3332874 - G 72 -9.2 -3.69354 | CCCCACAAGGGTAAA CAGGGC AAT GCCCCG GCGCCGGCTTAAAAA TERM 5262 3332917 - 3332904 - G 72 -4.5 -4.56597 | gap 1, overlap 3332905 GCGCCGGCTTAAAAA CCAGGC CAG GCC-GG TGAGCGCCAGGATCA TERM 5263 3332973 - 3332952 - G 74 -2.3 -5.0133 | overlap 3332954 CAGGGGGTGAAAAAA CATCATGAC GCTT ACCATGATA TCCACACCGTTTTCC TERM 5264 3333050 - 3333040 - G 78 -3.2 -5.14563 | TGGTCCACGAAAAAA TCGA TGG CCGA CTCGATGACCTCACC Dole_2765 3334275 - 3333076 - | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 5265 3334790 - 3334827 + r 76 -11.1 -3.21276 | opp_overlap 3334793, overlap 3334788 3334791 GTCGGGAATCAAAAA AAACCCCCGGCATGCGG CAAC CCGCATACCGGGGGCAA TGTTATCCAGACAAA TERM 5266 3334791 - 3334826 + r 89 -14.6 -2.52623 | opp_overlap 3334793, overlap 3334790 3334788 TCGGGAATCAAAAAA AACCCCCGGCATGCGG CAAC CCGCATACCGGGGGCA ATGTTATCCAGACAA TERM 5267 3334824 - 3334793 - R 100 -23.8 -5.95166 | opp_overlap 3334791 3334790 3334788 GGGAATCAAAAAAAA CCCCCGGCATGCGG CAAC CCGCATACCGGGGG CAATGTTATCCAGAC Dole_2766 3338178 - 3334858 - | hypothetical protein TERM 5268 3335014 - 3335033 + g 70 -4.3 -4.57073 | gap 1, opp_overlap 3335016, overlap 3335016 CTGTTTCACGTAATC CA-GGCTG CGGGC CAGCCATG TTTTTACGCCAACTC TERM 5269 3335827 - 3335807 - G 74 -2.6 -5.00884 | ATGCCTTCCAAAAAA TTATACGC GTCAA GGGTATAA CGGGTCAGGTCCGTG TERM 5270 3337429 - 3337416 - G 90 -6.7 -5.27335 | opp_overlap 3337416 3337418, overlap 3337418 GGTCGTAAATAAAAA TGCCA TAGG TGGCA CCGCCGTCAATGGTA TERM 5271 3338524 - 3338496 - H 74 -9.6 -3.51708 | gap 1, opp_overlap 3338463, overlap 3338492 3338497 3338499 CAGTCCGGAAATGAA GCACGGG-CAAGC TGTC GCTTGGCCCGTGG CACCCGTCAGAGACC TERM 5272 3338523 - 3338497 - H 81 -13.1 -2.70704 | gap 1, opp_overlap 3338463, overlap 3338496 3338492 3338499 AGTCCGGAAATGAAG CACGGG-CAAGC TGTC GCTTGGCCCGTG GCACCCGTCAGAGAC TERM 5273 3338688 - 3338676 - H 80 -9.1 -4.25283 | opp_overlap 3338685 ACTCCCCGACCAAAA CGGCA TAT TGCCG ACAATCGACTTTATA TERM 5274 3338927 - 3338904 - g 75 -5.9 -4.56597 | overlap 3338921 CGCCTGCTGGAAAAA CAGCGCCTG GTGGAA CAGGTGCCG CGCAAGGGCACCCGG Dole_2767 3338733 - 3339518 + | GntR family transcriptional regulator TERM 5275 3339713 - 3339678 - g 100 -14.2 -4.84359 | gap 1, opp_overlap 3339690, overlap 3339679 3339680 CCACCGCCAGAAAAA CGGTTTCGAAAATCGCC GGG GGCGATATTCGAAA-CG CCATGCTGGACAAAA TERM 5276 3339713 - 3339679 - g 88 -14.4 -3.50133 | opp_overlap 3339690, overlap 3339678 3339680 CACCGCCAGAAAAAC GGTTTCGAAAATCGCC GGG GGCGATATTCGAAACG CCATGCTGGACAAAA TERM 5277 3339712 - 3339680 - g 87 -17.9 -2.69598 | opp_overlap 3339690, overlap 3339678 3339679 ACCGCCAGAAAAACG GTTTCGAAAATCGCC GGG GGCGATATTCGAAAC GCCATGCTGGACAAA Dole_2768 3339515 - 3340978 + | hypothetical protein TERM 5278 3341765 - 3341741 - g 95 -6.3 -5.47821 | overlap 3341742 3341743 ACTGATCGAAAAAAA CCCCACCGCCA TCG TGGTGGCGGAA AACCTCTGCTTCGGC Dole_2769 3340980 - 3342119 + | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 5279 3343023 - 3343013 - g 74 -8.2 -4.1585 | overlap 3343004 GCAGAACGCTGAAAA CGGC ATT GCCG GCCTCAAATCCGGCA Dole_2770 3342147 - 3343547 + | 2-hydroxyglutaryl-CoA dehydratase D-component Dole_2771 3343544 - 3344347 + | putative CoA-substrate-specific enzyme activase TERM 5280 3345084 - 3345135 + G 74 -11.6 -3.61517 | opp_overlap 3345075 3345124 3345126, overlap 3345126 GATCAACGGGGCCCT GGGCGCGGCCCTGTTCGC-GGCCG AATTGG CAGCCGGCAAATAGGGCCG-GCTC TTATTGGCCGGCCCT Dole_2772 3344344 - 3345126 + | putative CoA-substrate-specific enzyme activase TERM 5281 3345151 - 3345124 - f 74 -9.8 -3.55444 | opp_overlap 3345084 3345126, overlap 3345126 TTGGCAGCCGGCAAA TAGGGCCGGC TCTTATTG GCCGGCCCTG TTGGAGACATTGTTC TERM 5282 3345149 - 3345126 - f 85 -12.4 -3.35597 | opp_overlap 3345084 3345126, overlap 3345124 GGCAGCCGGCAAATA GGGCCGGC TCTTATTG GCCGGCCC TGTTGGAGACATTGT TERM 5283 3345126 - 3345149 + F 83 -13.1 -3.03338 | opp_overlap 3345126 3345124, overlap 3345084 GGCAGCCGGCAAATA GGGCCGGCT CTTATT GGCCGGCCC TGTTGGAGACATTGT TERM 5284 3345267 - 3345255 - f 71 -6.9 -4.29953 | overlap 3345252 AAAGTACCAAAAGAA CCGCG CCC CGCAG CTTGGCGCTCGGCTG TERM 5285 3345480 - 3345507 + F 76 -7 -4.43477 | opp_overlap 3345477 GGCTTGCAATGACCG TCGGTTTCGATA CCGA TAGCGATACCGA TTTTGATTAGATAGG TERM 5286 3346002 - 3345982 - g 80 -2.5 -5.1861 | opp_overlap 3345982 CGCATCAGCAAAAAA GCAAAAACC GAC GGATTTTCC CTTTCATTCCTGGGA Dole_2773 3345538 - 3346281 + | hypothetical protein TERM 5287 3347130 - 3347142 + G 100 -10.5 -5.25803 | CCCCTGGACGCCATT GCCCG TCA CGGGC TTTTTTCTCCGGGTT Dole_2774 3346281 - 3347411 + | 2-hydroxyglutaryl-CoA dehydratase D-component Dole_2775 3347414 - 3348823 + | 2-hydroxyglutaryl-CoA dehydratase D-component TERM 5288 3349711 - 3349721 + G 71 -6.8 -4.15453 | opp_overlap 3349696, overlap 3349696 GCCGGCCCCGGACAT TGCC GCC GGCA TTTTCGCCTCCATTG Dole_2776 3349139 - 3349957 + | putative CoA-substrate-specific enzyme activase TERM 5289 3349962 - 3349995 + F 70 -2.3 -5.00616 | gap 1, opp_overlap 3349960 3349959 CGCGCGCATAAACCG CTGCTCCCGTTGCAGC GCA GCCG-AACGCGAACGG TTTTTTCGGAAGAAG Dole_2777 3350176 - 3350958 + | cobyrinic acid ac-diamide synthase TERM 5290 3351183 - 3351171 - T 71 -6.9 -4.29953 | overlap 3351168 AAAGTACCAAAAGAA CCGCG CCC CGCAG CTTGGCCTCTGGCTT TERM 5291 3351327 - 3351308 - T 77 -4.8 -5.00616 | overlap 3351310 CTTTCTCCGAAAAAA GCGCCCCC GCTC GGCTGCGC TGCAACGGGCGAAAA Dole_2778 3352675 - 3352172 - | hypothetical protein TERM 5292 3353324 - 3353313 - R 71 -7.2 -4.08216 | TGACCGGCTGCAAAA CGCC TGAC GGCG TCACTACAAACAAGA TERM 5293 3353734 - 3353711 - R 73 -5.3 -4.56597 | gap 1 GGCGGCTGGCAAAAA GGCTTGACCG GCAGG CGATCA-GCC GGTGTCGATACCGAT Dole_2779 3355019 - 3353790 - | L,L-diaminopimelate aminotransferase TERM 5294 3353901 - 3353925 + g 72 -8.5 -3.86015 | opp_overlap 3353896 3353895 CTTTCCAAATCCCCC GCCCGGGGT ACACACC ACCCCGGCC TTTGTCAGCAGGGTA TERM 5295 3354268 - 3354246 - G 88 -11.2 -4.21194 | opp_overlap 3354249 3354250 TGGCACCACGGAAAA GGCGCACCGG GTG CCGGTGAACC CGGCGGTTTTGGAAA Dole_2780 3355111 - 3355398 + | hypothetical protein Dole_2781 3355450 - 3356121 + | SNARE associated Golgi protein TERM 5296 3356274 - 3356229 - T 73 -4.5 -4.72272 | overlap 3356236 3356238 CTTTCCCAGCAAAAA CGCATAACACCGACGCAGCCC GAAC GGGCTACGGCGGCACAACTCA CCTGCATCCGCCTTC TERM 5297 3356267 - 3356236 - T 86 -12.2 -3.56762 | overlap 3356229 3356238 AGCAAAAACGCATAA CACCGACGCAGCCC GAAC GGGCTACGGCGGCA CAACTCACCTGCATC TERM 5298 3356265 - 3356238 - T 93 -14.8 -3.34591 | overlap 3356236 3356229 CAAAAACGCATAACA CCGACGCAGCCC GAAC GGGCTACGGCGG CACAACTCACCTGCA Dole_2782 3357568 - 3356393 - | cell division protein FtsZ TERM 5299 3356504 - 3356523 + g 74 -11.4 -3.55444 | ACCGGACACCTCCTG CACCCGCC GGAA GGTGGGTG TTTCCAGGCTCGACA TERM 5300 3357593 - 3357611 + r 79 -11 -3.4529 | overlap 3357594 3357610 TTTCACTGGGTCGGT TGGAACCC CGC GGGTTCCG TTATGGTAATGCTGT TERM 5301 3357594 - 3357610 + r 78 -12.3 -2.66692 | overlap 3357593 TTCACTGGGTCGGTT GGAACCC CGC GGGTTCC GTTATGGTAATGCTG Dole_2783 3358857 - 3357634 - | cell division protein FtsA TERM 5302 3358787 - 3358808 + g 76 -2.9 -4.91109 | overlap 3358789 ATCTTGTCACCGTCT TTTTCACCG ACCA CGGTGCATA TTTTTGTCGTGCCGA Dole_2784 3359735 - 3358839 - | polypeptide-transport-associated domain-containing protein TERM 5303 3359310 - 3359298 - G 86 -4.7 -5.24129 | GTCGCTGATAAAAAA CCGGG TGC CCAGG TTCACCACCGCCATG TERM 5304 3359634 - 3359664 + g 100 -11.7 -4.56775 | overlap 3359635 3359652 CCTTAGCACGCGCAC AGCCCCCTGCCGG ACCGG CCGGCGGGGCGCG TTTTTCCGGGCCGGT TERM 5305 3359635 - 3359663 + g 87 -15.2 -3.33744 | overlap 3359634 3359652 CTTAGCACGCGCACA GCCCCCTGCCGG ACCGG CCGGCGGGGCGC GTTTTTCCGGGCCGG Dole_2785 3360663 - 3359722 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 5306 3359888 - 3359849 - G 82 -6.4 -4.77165 | gap 2, overlap 3359851 CTGTTTACAAGAAAA TTGCCGTGGGC--CTCCG ACACAA CGGCGCCGCCCACGGCCA GACCTTTAAGCCCGG TERM 5307 3359932 - 3359944 + g 72 -4.7 -4.56775 | overlap 3359933 CTTTCCCGCCGGGTC ACCGG CTT CCGGA TTTTTAAAAAAGCAT TERM 5308 3359976 - 3359956 - G 86 -5.3 -5.03314 | overlap 3359959 CGGATTTTTAAAAAA GCATCCCGC GCT GCGGAACCC GGCCGGCTGAGTGGC Dole_2786 3362056 - 3360683 - | UDP-N-acetylmuramate--alanine ligase TERM 5309 3361858 - 3361874 + g 78 -6.5 -4.63527 | opp_overlap 3361860, overlap 3361824 ATGACACCACCACCA CATCGGC GCC GCCAATG TTTTTGCCGTCATGG Dole_2787 3363204 - 3362047 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 5310 3362124 - 3362155 + g 72 -5.1 -4.64657 | gap 2, opp_overlap 3362098, overlap 3362110 3362125 3362125 CCCGGGCCACGCGTC GCCC-GGCATC-GGG TTTT CCCAGGTGCCTGGAC TTTTTCGCCATTTCC TERM 5311 3362187 - 3362175 - G 82 -10.5 -4.11216 | TCGCCATTTCCAAAA GCGCC TCG GGCGC ACCGGCGTAAAACCC TERM 5312 3362673 - 3362702 + g 70 -4.1 -4.56597 | opp_overlap 3362673, overlap 3362659 3362673 TGGCGTTCAAAAAAG CCTTTCGCACCGG ATTG CCGGTGGTCAGGG TTTTTGCCGCGCCCA TERM 5313 3363090 - 3363072 - G 79 -13.8 -3.13403 | opp_overlap 3363070, overlap 3363070 CCGTGCCGACGAACA GCACCCGG CAC CCGGGCGC CATCTCCTTTAAGCT Dole_2788 3364312 - 3363197 - | cell division protein FtsW Dole_2789 3365678 - 3364299 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 5314 3364851 - 3364876 + g 80 -4.7 -4.87665 | gap 1, opp_overlap 3364851 CCGGGCCCGCATCAA CGGGGA-CGTCA CGC TGATGGTCGCCG TTTTTGTCCCTGCCG TERM 5315 3365071 - 3365054 - G 75 -5.5 -4.56597 | overlap 3365056 CCTGGTTCTCAAAAA TACGGCC CTTG GACCGCA CGTAAGCGTTAAAGT TERM 5316 3365325 - 3365346 + g 81 -11.5 -3.85698 | GGTTTTGCCGTTGGT GCCGGTGAC CGCG GCCACCGGC TTTGTGACAAACCGG Dole_2790 3366757 - 3365678 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 5317 3366259 - 3366244 - G 77 -2.4 -5.1101 | GCACGATGTAAAAAA GCCCCA GGTC CGGCGC CACCCGTTTGAAAAA TERM 5318 3366302 - 3366275 - G 75 -5.5 -4.57073 | CACCCGTTTGAAAAA GGGCACCAGCA GCACGG TGTTGGTGTCC GAGGCCGCGAAAATC Dole_2791 3368178 - 3366760 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 5319 3366907 - 3366923 + g 74 -2.3 -5.02074 | overlap 3366910 TTCGATGATTGTTTC TTTTGAT TCA ATCATAA TTTTTTCAGGCGTCA TERM 5320 3367696 - 3367710 + g 75 -5.6 -4.56597 | opp_overlap 3367695, overlap 3367697 ACCCATCTCAAGGAT CGCCAC CTG GTGGCC TTTTTCCAGCCGCAG Dole_2792 3369798 - 3368209 - | UDP-N-acetylmuramyl-tripeptide synthetase TERM 5321 3368757 - 3368737 - G 80 -4.6 -4.97405 | opp_overlap 3368737 ATCCACAAAAACAAA GCGGCCCA TCCGG TCGGCCAC CTTTTCCAGGCGGCC TERM 5322 3369544 - 3369503 - G 77 -10.8 -3.79419 | gap 1, overlap 3369501 3369514 GCGCCGTAGAAAACA GCGGACAGC-AACGCCAGG GCGTT CCGGGCGTCAGCCACCCGC ACCGTCACGGCGTCG Dole_2793 3371555 - 3369795 - | peptidoglycan glycosyltransferase TERM 5323 3370548 - 3370566 + g 75 -3.8 -4.82901 | overlap 3370549 GAGCCAGCCGTGGGC CTTGGTGT CAT GCACCAAA TTTTTGTAAACCCGG TERM 5324 3370636 - 3370607 - G 93 -5.5 -5.60993 | opp_overlap 3370631, overlap 3370608 CCTCGCAGAAAAAAA CGCTGTCCGGCGT GCAG ACGCCGGCCTCCA GGGCGGCCGCGGCCA TERM 5325 3371201 - 3371213 + g 70 -4.1 -4.61566 | ATACAAAGGATTTAC CGGAT GCG ATCTG TTTTCTGATTTCCCC Dole_2794 3371848 - 3371552 - | hypothetical protein TERM 5326 3371874 - 3371910 + r 76 -10 -3.65529 | overlap 3371875 3371909 CGGTGGTTATACTTT TTCCGCGGCCCGCAGC CGCAC GCTTCGGGCCATGGGG TTTGCCTGAACCTCT TERM 5327 3371875 - 3371909 + r 74 -11.3 -2.78996 | overlap 3371874 GGTGGTTATACTTTT TCCGCGGCCCGCAGC CGCAC GCTTCGGGCCATGGG GTTTGCCTGAACCTC Dole_2795 3372803 - 3371865 - | S-adenosyl-methyltransferase MraW TERM 5328 3372612 - 3372587 - G 79 -7.5 -4.67943 | opp_overlap 3372585 3372587 3372588, overlap 3372588 CCCGAACATATAAAA CGCGCTCTCCA AAAA CGGAAAGCGCC TGTTTCGCGTGAGCC TERM 5329 3372611 - 3372588 - G 73 -11 -3.40043 | opp_overlap 3372587 3372585 3372588, overlap 3372587 CCGAACATATAAAAC GCGCTCTCCA AAAA CGGAAAGCGC CTGTTTCGCGTGAGC Dole_2796 3373245 - 3372805 - | MraZ protein TERM 5330 3373045 - 3373033 - G 91 -6.9 -5.24531 | opp_overlap 3373038 ACGCCCGATAAAAAA CCGGC GGA ACCGG CGCATCTGGTTGCCC TERM 5331 3373724 - 3373712 - g 71 -10.5 -3.63515 | TCCCATGCTCAAGAA CCCGC CCT GCGGG TATGGCCAGCACATG Dole_2797 3373488 - 3374483 + | putative tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase TERM 5332 3375309 - 3375293 - g 82 -6.5 -4.82667 | overlap 3375295 TGACGAGATCAAAAA GCTCCAG GGG CTGGACC TGACGGCAGCGGCCG TERM 5333 3375725 - 3375689 - g 78 -6.3 -4.63928 | overlap 3375691 AGACCAGTGGAAAAA GGCCGCGGCCCGGCAGG AGA CCTTCCGGATCAAGGGC GAAAAGGACACGGTC TERM 5334 3375741 - 3375731 - g 71 -6.8 -4.15106 | overlap 3375736 GATCAAGGGCGAAAA GGAC ACG GTCC GCACCATCTATGAAA TERM 5335 3376063 - 3376041 - g 76 -3.3 -5.00616 | gap 1 CCCCTGCGCAAAAAA GGC-CGGGGC CTTT GCCCCTCACC GGGGTGGACCGGTGA TERM 5336 3376142 - 3376130 - g 72 -4.7 -4.65895 | opp_overlap 3376131, overlap 3376131 CCCGTCAGTGAAAAA CCCGG ACA CCGGT TACGTGGGCACGGCC Dole_2798 3374604 - 3377150 + | penicillin amidase TERM 5337 3377213 - 3377200 - f 73 -5.3 -4.57569 | TCAGGCCGGCAAAAA GATTC ATCG GAATC GAAATCGATTCCCCT TERM 5338 3378173 - 3378157 - g 72 -9.5 -3.74693 | overlap 3378171 CCCGACGGCAGCAAA GCCTTTT ATG AAAAGGC GGGCAGCACCGACAA Dole_2799 3377449 - 3378303 + | alpha/beta hydrolase fold TERM 5339 3378313 - 3378303 - T 80 -8.2 -4.37763 | opp_overlap 3378292, overlap 3378305 CCACGTAAAAAAATA GGGG CAG CCCC GGCCGGCTATTTTTT Dole_2800 3379390 - 3378320 - | GTPase EngC TERM 5340 3379094 - 3379104 + g 83 -8.2 -4.65895 | overlap 3379086 3379085 CCCGGCGGCCCTGCG GCGC AGC GCGC TTTTTCGCTCCAGGA TERM 5341 3379127 - 3379153 + g 78 -6.5 -4.56597 | overlap 3379129 CTCCAGGACCGCGCG CACCCGGCC CAGTTCGCC GGCCGGGTC TTTTTCAACGCACAC TERM 5342 3379129 - 3379151 + g 72 -9.1 -3.90048 | overlap 3379127 CCAGGACCGCGCGCA CCCGGCC CAGTTCGCC GGCCGGG TCTTTTTCAACGCAC TERM 5343 3379532 - 3379518 - R 71 -4.2 -4.74504 | ATGTCAATCGAAAAA CATGGC ATT GGCATG CGCCATAATGCAGGG Dole_2801 3381949 - 3379784 - | copper-translocating P-type ATPase TERM 5344 3380729 - 3380753 + g 73 -12.1 -3.17146 | overlap 3380725 GATGACATCGAGATT CCGTGCCGCCT CAA AGGCCGTACGG TCTCTTATCAGCAGC TERM 5345 3381436 - 3381419 - G 73 -3.4 -4.83615 | CAGTTCCCAGAAAAA GACCTT TCCGGG AAGGCC GAACACCACGGCACT Dole_2802 3382783 - 3382148 - | hypothetical protein TERM 5346 3382254 - 3382228 - G 100 -14.5 -3.9712 | gap 1, opp_overlap 3382225 GCACCTGATGATAAA GGGGGC-TGTCG GGCC CGACACGCCCCC CCATATCATAGGTGA Dole_2803 3383318 - 3382767 - | protein of unknown function DUF395 YeeE/YedE Dole_2804 3383857 - 3383315 - | hypothetical protein TERM 5347 3383804 - 3383791 - G 78 -8.1 -4.42156 | AAACAAAAAGAATAA TGCCC GCCA GGGCA AAGGCGGCCGGAAGC Dole_2805 3384948 - 3383860 - | rhodanese domain-containing protein TERM 5348 3384999 - 3384989 - R 77 -6.8 -4.63218 | TTTTGGTTAACAAAA GCGA TGA TCGC CTCAATGTCCGGCAC Dole_2806 3385437 - 3384964 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Dole_2807 3387858 - 3386458 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 5349 3386518 - 3386531 + g 83 -5.9 -4.95547 | overlap 3386515 CGTGATGCCCAGGCG GCGGG CGGC CTCGC TTTTGTTGTTATCCG TERM 5350 3386940 - 3386929 - G 70 -3.6 -4.59773 | GTTGAGCCGGAAAAA CAGG TCTT CCCG AAAAGTGCCGGCCTC TERM 5351 3387032 - 3387042 + g 76 -4.6 -4.72272 | overlap 3387018 CGTTCCCCGCCCACG GGGG TGA CCTC TTTTTCCTGAAGCAC TERM 5352 3387516 - 3387543 + g 78 -4.1 -5.0133 | gap 1 GCTTTTCAAAATCCA GGGGCTTG-GTC AGGTA GTCGTAAGCCCC TTTTTTCAGAGCCTC TERM 5353 3387717 - 3387743 + g 86 -15.9 -2.78384 | gap 1, opp_overlap 3387709 GAACATATTCCACCG CGGCC-AGGCCG TCGT CGGCCTCGGCCG TCTGGTGGCCCCACC Dole_2808 3389642 - 3387855 - | PAS/PAC sensor signal transduction histidine kinase TERM 5354 3388509 - 3388529 + g 72 -4.5 -4.56597 | overlap 3388470 3388511 GCCGATGGCGGCCAG GCGGCGGCT GCG GGCCACCTC TTTTTCCAGGCGGCG TERM 5355 3389099 - 3389089 - G 76 -3.2 -5.00884 | ATGTCCTGGAAAAAA TGCA TGG CGCA CCAGTCGTTGAACAG TERM 5356 3389691 - 3389671 - H 73 -8.1 -3.99957 | TTAAATATTGATAAA CGGCCCTGC ATG GCCCGGCCG GTACAGGGACTGACG TERM 5357 3389816 - 3389829 + H 73 -9.5 -3.29144 | overlap 3389823 GGTTGCCTCCATTTC CGGCG GCCC CGCCG TTGTCCGAAAACTAC TERM 5358 3389926 - 3389906 - H 71 -4 -4.67982 | gap 1 CCGGATTTAAGAAAA CCTTACCGC CTTT ACGG-AAGG AAATCAACAAAAAAC TERM 5359 3390057 - 3390045 - H 72 -6.2 -4.43189 | ATTAACTTTATAAAA CCGG CAAAT CCGG TCTGAAAGGAGAAGT TERM 5360 3390517 - 3390542 + G 82 -13.3 -3.30159 | CATGTGGTTTTGGTT TTCAGGGCCGG TCCC CCGGTCCTGGA TTGTGCCGGAATTAG Dole_2809 3390075 - 3390557 + | hypothetical protein TERM 5361 3390861 - 3390842 - f 71 -9.2 -3.53091 | opp_overlap 3390846 3390848 ACCTTTGTGTTCAAA CCGGCTGG CCGG CCAGCCTG ACAGGTCTTTGATTG TERM 5362 3390992 - 3390936 - f 81 -3.2 -5.40072 | gap 2, overlap 3390938 GCTTCGGCAAAAAAA CTGGTTTTTTCACCATGCCTCATGTAAG ATA CCGCCATGAAGC-T-GTAAAAAAACCTG TAAGCATTCTGTTTT Dole_2810 3391049 - 3391432 + | response regulator receiver protein TERM 5363 3391475 - 3391435 - T 90 -10.4 -4.34402 | opp_overlap 3391440 3391441, overlap 3391440 CCTGGTAGACTAAAA CAGACCGGGCCGGAAAGC GTTAA ACTTTCCGGCCCCTTGTG TCTGCCGGACTAAAC TERM 5364 3391440 - 3391470 + T 89 -12.6 -3.58726 | opp_overlap 3391440 3391435, overlap 3391441 TAGACTAAAACAGAC CGGGCCGGAAAG CGTTAAA CTTTCCGGCCCC TTGTGTCTGCCGGAC TERM 5365 3391470 - 3391440 - T 84 -13.3 -2.67392 | opp_overlap 3391440 3391441, overlap 3391435 TAGACTAAAACAGAC CGGGCCGGAAAGC GTTAA ACTTTCCGGCCCC TTGTGTCTGCCGGAC TERM 5366 3391441 - 3391469 + T 100 -16.1 -2.75022 | opp_overlap 3391440 3391435, overlap 3391440 AGACTAAAACAGACC GGGCCGGAAAG CGTTAAA CTTTCCGGCCC CTTGTGTCTGCCGGA Dole_2811 3392981 - 3391485 - | multi-sensor signal transduction histidine kinase Dole_2812 3394458 - 3392971 - | PAS/PAC sensor signal transduction histidine kinase TERM 5367 3394412 - 3394399 - G 84 -2.3 -5.35459 | AGAGATGATAAAAAA CTTCC GCTG GGACG CATCAATGGACTTGA TERM 5368 3394588 - 3394611 + H 78 -12.4 -2.60244 | TAATCAGGCCCTATT GTGACGCCGT ACCC ACGGCGGCAC TCACTTGATTGACAA TERM 5369 3394749 - 3394735 - g 78 -8.5 -4.13767 | overlap 3394711 3394710 CCGTTGACGTTAAAA CCGGG CTTCC CCCGG AGGAACTGAAATCCA TERM 5370 3395063 - 3395049 - g 100 -5.6 -5.79595 | opp_overlap 3395048 TGGGAAAAGAAAAAA CTCCAG GGC CGGGAG GTGTTCAACAAGACC Dole_2813 3394644 - 3396242 + | D-3-phosphoglycerate dehydrogenase TERM 5371 3396445 - 3396429 - g 83 -4.4 -5.06103 | opp_overlap 3396430 3396431 3396433, overlap 3396435 ACAAGTCCCAAAAAA CGGAAA GCCGG CTTCCG GCCATCAATTTTTCC TERM 5372 3396447 - 3396435 - g 80 -10.5 -4.05875 | opp_overlap 3396433 3396431 3396430, overlap 3396429 CCCAAAAAACGGAAA GCCGG CTT CCGGC CATCAATTTTTCCAC TERM 5373 3396559 - 3396544 - g 81 -3.2 -5.186 | overlap 3396545 3396546 CAAAACAGAGAAAAA CCTGGC CGTG GCCAAA CATACCATCGACATT Dole_2814 3396365 - 3396691 + | hypothetical protein TERM 5374 3396722 - 3396772 + G 75 -5.8 -4.62336 | opp_overlap 3396699 TCCCCACGGCAATCA GCAGGCGGTGCGTGGCGGGCGCCG GAA TGGCCCTTGCCCTGCTTACCCTGC TTTTTACCATGAACT Dole_2815 3396688 - 3398145 + | protease Do TERM 5375 3398182 - 3398135 - f 100 -13.5 -4.84359 | opp_overlap 3398138, overlap 3398136 TCATGGTGATAAAAA CCACCCGGTAGCCCGGATATT GCATAA AACATCCGGGGTAACGGGCGA CAACACCGGACAATT TERM 5376 3398181 - 3398136 - f 93 -14.8 -3.50133 | opp_overlap 3398138, overlap 3398135 CATGGTGATAAAAAC CACCCGGTAGCCCGGATATT GCATAA AACATCCGGGGTAACGGGCG ACAACACCGGACAAT TERM 5377 3398198 - 3398237 + F 100 -13.1 -4.46212 | gap 2, opp_overlap 3398197 3398196, overlap 3398200 3398201 CAACACCGGACAATT TGAGCAGGCGCTTGATATC TCCC GATATCA-GCGCCTGC-CG TTTTATGGTAACCAA TERM 5378 3398200 - 3398236 + F 93 -14.6 -3.27406 | gap 1, opp_overlap 3398197 3398196, overlap 3398198 3398201 ACACCGGACAATTTG AGCAGGCGCTTGATATC TCCC GATATCA-GCGCCTGCC GTTTTATGGTAACCA TERM 5379 3398201 - 3398235 + F 100 -18.1 -2.56122 | gap 1, opp_overlap 3398197 3398196, overlap 3398200 3398198 CACCGGACAATTTGA GCAGGCGCTTGATATC TCCC GATATCA-GCGCCTGC CGTTTTATGGTAACC TERM 5380 3398570 - 3398530 - g 70 -11.7 -2.71144 | overlap 3398532 CACCCTTGTCAAGCA CATTCCTGTGGCCGCCGGC CTG GGCGGCGGCAGCAGCAACG CCGCAACGGTCCTGG TERM 5381 3399001 - 3399014 + G 75 -5.9 -4.56597 | overlap 3398989 3399002 GTCCGGCAGCGGCCC TGCCG TGTT CGGCG TTTTTAAGGACCCGG Dole_2816 3398264 - 3399121 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 5382 3399426 - 3399410 - g 70 -5.1 -4.5287 | opp_overlap 3399408 3399410, overlap 3399404 CGAAATCAACGAAAA CGTCC GGCGCAA GGACG TGTTTCTGATCCAGT Dole_2817 3399258 - 3400211 + | ribose-phosphate pyrophosphokinase Dole_2818 3400263 - 3400916 + | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 5383 3401173 - 3401184 + G 71 -7.2 -4.11216 | opp_overlap 3401170 3401168, overlap 3401171 GATTTATGAACAGCA GCGG GCCG CCGC TTTTCCGGCTGGCAC Dole_2819 3400956 - 3401537 + | aminoacyl-tRNA hydrolase Dole_2820 3401596 - 3403668 + | membrane-bound proton-translocating pyrophosphatase TERM 5384 3403698 - 3403723 + F 100 -16.1 -4.8622 | opp_overlap 3403698 CAACCTGAGATAAAA GGGGGAGAGCC GGCC GGCCCTCCCCC TTTTTAGTTGCCGGA TERM 5385 3403723 - 3403698 - f 100 -18.3 -4.55118 | opp_overlap 3403698 CAACCTGAGATAAAA GGGGGAGAGCC GGCC GGCCCTCCCCC TTTTTAGTTGCCGGA TERM 5386 3404178 - 3404195 + G 70 -2.7 -4.72986 | CTGTACGAGGTGGCT GAGGT GTTCCGGG ACCTC TTTTTGCTGAAAATG Dole_2821 3403803 - 3404369 + | CarD family transcriptional regulator TERM 5387 3404583 - 3404568 - g 77 -8.2 -4.3739 | overlap 3404577 CATTCCTTCACAAAA GCCGGA AAAG CCCGGC CCCGAGCCCGCCCCC TERM 5388 3404876 - 3404848 - g 77 -11.7 -3.59262 | opp_overlap 3404848, overlap 3404849 TCCGACATGTTCAAA TCCAGGCAGGTCC GCA AGACCTACCTGGC TCTGGTATACGGCCA TERM 5389 3404875 - 3404849 - g 83 -15.2 -2.75343 | opp_overlap 3404848, overlap 3404848 CCGACATGTTCAAAT CCAGGCAGGTCC GCA AGACCTACCTGG CTCTGGTATACGGCC Dole_2822 3404356 - 3405345 + | RluA family pseudouridine synthase TERM 5390 3405477 - 3405491 + G 81 -12.8 -3.51934 | overlap 3405475 CCCTTGCCATGGCCC GGCGGG GAG CCCGCC TCTTTCTCACCGACA Dole_2823 3405389 - 3406267 + | short chain dehydrogenase TERM 5391 3406704 - 3406723 + G 72 -5.1 -4.56597 | opp_overlap 3406704 GCGACAGGCAAGAAA GATGTTT CGGGTA AAACATC TTTTTACCGCCGGGC TERM 5392 3407210 - 3407238 + G 78 -8.1 -4.41348 | ATGTACAGGCCCTGT GTGACAAGTGGCG CAT CTCCGATTGTCAC TTTCTTTCCGGGGGC Dole_2824 3406264 - 3407340 + | hypothetical protein TERM 5393 3407372 - 3407398 + T 100 -19.5 -5.75538 | opp_overlap 3407372 AGAACGAATAAAAAA GGGGCGAAGCC CTAAC GGCTTCGCCCC TTTTTGTTTTTTCCA TERM 5394 3407398 - 3407372 - T 100 -19.5 -5.57396 | opp_overlap 3407372 AGAACGAATAAAAAA GGGGCGAAGCC CTAAC GGCTTCGCCCC TTTTTGTTTTTTCCA Dole_2825 3409530 - 3407431 - | electron transport complex, RnfABCDGE type, B subunit TERM 5395 3407725 - 3407697 - G 73 -11.5 -3.47431 | opp_overlap 3407696, overlap 3407691 3407698 AGAGGTAAAGATCAA TGGAGCGGGCCGC GCG GCGGCCCCCGCCG ATGGCTTCCACCACC TERM 5396 3407724 - 3407698 - G 81 -15 -2.67735 | opp_overlap 3407696, overlap 3407697 3407691 GAGGTAAAGATCAAT GGAGCGGGCCGC GCG GCGGCCCCCGCC GATGGCTTCCACCAC TERM 5397 3408635 - 3408602 - G 95 -13.7 -4.37092 | opp_overlap 3408591 3408591 3408605, overlap 3408604 ACCCGGCGCAGAAAA TAGGCGGCGGTCAGG CCGG CCGGGCCGCCGCCGA TCACCGCTACCTTCT TERM 5398 3408633 - 3408604 - G 100 -16.3 -3.79419 | opp_overlap 3408591 3408591 3408605, overlap 3408602 CCGGCGCAGAAAATA GGCGGCGGTCAGG CCGG CCGGGCCGCCGCC GATCACCGCTACCTT Dole_2826 3410142 - 3409567 - | electron transport complex, RnfABCDGE type, A subunit Dole_2827 3410754 - 3410152 - | SoxR-reducing system protein RsxE TERM 5399 3410214 - 3410204 - G 78 -8.2 -4.55287 | CCGAGGCACACAAAA GCGC CCG GCGC CTGCACCATAAAGGC Dole_2828 3411360 - 3410770 - | electron transport complex, RnfABCDGE type, G subunit Dole_2829 3412322 - 3411360 - | electron transport complex, RnfABCDGE type, D subunit Dole_2830 3413595 - 3412312 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 5400 3412466 - 3412440 - G 72 -8.7 -3.79668 | gap 1, overlap 3412443 AGTCAATGCAGGAAA GC-AGGTCGTGG CTGT CCACGGCCTCGC CGTACTCCCCGGCCT TERM 5401 3412947 - 3412963 + g 100 -7.9 -5.63517 | GCGGGTTGGCCGCCG GGTAGGC AGC GCCGACC TTTTTTATTTCCAGC TERM 5402 3413026 - 3413050 + g 70 -4.1 -4.57569 | overlap 3413028 GAACACCGTCAGCAT CATTCGGGGCG CGC CGCCCAGCATC TTTTTCAGGGCCTCG TERM 5403 3413245 - 3413221 - G 70 -4.1 -4.62783 | opp_overlap 3413235 CACGCACCGCAAAAA CCGGTCGGCAG CCT CCAGCGACGGG GTTTTACCGGCCTGG TERM 5404 3413649 - 3413629 - R 76 -8.9 -3.85704 | opp_overlap 3413643 3413646 CCATTAACTATTAAA TGCCGTGAC ACC GCCGCGGCA AACGTGTCTCTACTG Dole_2831 3414213 - 3413659 - | hypothetical protein TERM 5405 3414423 - 3414412 - R 80 -7.2 -4.53303 | GAGGTGCAGAGAAAA CGGG TAAG CCCG CTCAGAACGGCCAGA Dole_2832 3415120 - 3414425 - | transcriptional regulatory protein TERM 5406 3414492 - 3414545 + g 78 -4.3 -4.9218 | gap 1, opp_overlap 3414499 CCGGCATACTGGCGG GCATAC-AGGTCGGCCCTGGCCTGGA CCT TCCGGGCCACGGCCAGCAGAGAAGGC TTTTTCTGATGGGTG TERM 5407 3415214 - 3415172 - R 100 -14.8 -5.40072 | GCTGTTTTAAAAAAA TCGGGCGGCGGGCATGAC GGGGAAA GACATGCTCGCCGCCGGA ATCAACAGAAATCCG Dole_2833 3415540 - 3415265 - | hypothetical protein Dole_2834 3415809 - 3415979 + | hypothetical protein TERM 5408 3416009 - 3415995 - f 87 -12.8 -3.36175 | overlap 3415982 AAGGCCTAGTCACAA CCGGCC GGC GGCCGG ATTCCAACAACCCCA Dole_2835 3416047 - 3416697 + | hypothetical protein TERM 5409 3416972 - 3416925 - T 84 -12.7 -3.12351 | gap 1 TGGCCGCAGATGCAA GGCGCGGCATGCGACGCTGTAG CCGGT CTACTGCGA-GCATGCCGCAAC ACAGCAGATGCGGCC TERM 5410 3416995 - 3417011 + T 70 -2.1 -5.00616 | opp_overlap 3416981, overlap 3416996 ATGCGGCCAAGGCGG CTCGCCC GAA GGGGGAA TTTTTTCGACAGAAA TERM 5411 3417139 - 3417121 - T 100 -16 -3.17075 | GTTTGCGCAAGGGAA GCCACGCC TGT GGCGTGGC GAGCCAGAGGCCAAG TERM 5412 3417158 - 3417174 + T 95 -12.3 -4.29953 | overlap 3417155 CCAGAGGCCAAGCTG TCACGCC TGC GGCGTGA TTCTTTTGGTACTTT TERM 5413 3417389 - 3417413 + T 80 -12.2 -2.77523 | gap 1, opp_overlap 3417398, overlap 3417384 GAAATGTCCGGGCTC GCCGGGAAAGG GACG CCTT-CCCGGC TACTCTTCCTGAAGC Dole_2836 3419170 - 3417413 - | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA Dole_2837 3420339 - 3419170 - | lipid-A-disaccharide synthase TERM 5414 3419985 - 3419999 + g 73 -11.4 -3.36671 | GAATGCCGTGCTTTT TGGCCG TTG CGGCCA TTCTCAGGTTAAAAT Dole_2838 3421288 - 3420332 - | oxidoreductase domain-containing protein Dole_2839 3422128 - 3421307 - | hypothetical protein TERM 5415 3421566 - 3421606 + g 70 -3.7 -4.56597 | overlap 3421568 CCCCGGGCAATGGCC GCGTCGGTGCCCTCGATGG CCT CCACCGCCAGCACGGACCC TTTTTGCACCACCAC TERM 5416 3421683 - 3421703 + g 76 -4.6 -4.72007 | overlap 3421685 CCAAGGGAGATATCG GACCACTG ACCGG CGGTGGGC TTTGTTTTCGTCCAG TERM 5417 3422220 - 3422239 + r 73 -7.2 -4.17657 | gap 1 AACGATATTCATCCA TCCCG-GAA AAC TTCACGGGA TTTTGGCCTATCGTG Dole_2840 3423017 - 3422247 - | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase Dole_2841 3423486 - 3423034 - | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ Dole_2842 3424531 - 3423509 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase TERM 5418 3423621 - 3423649 + g 100 -12.4 -4.51196 | gap 1 AATTTGTGTGGCATA CCCGGCG-TACCG GAAA CGGTTTCGCCGGG TTTTATCGATTTCAC TERM 5419 3424411 - 3424397 - G 79 -7 -4.57073 | overlap 3424398 GATGCGCTTTAAAAA TCCGGC GCT GCCGGC CAGGGTGATCTCCTC TERM 5420 3424549 - 3424585 + r 74 -3 -5.09426 | gap 1, overlap 3424535 3424552 ACAGGCTGCCTCACC TTG-TCTTCGACGGGAA TTAC TCCCCGTCCAGGGTCAA TTTTTTGGAATTGGC Dole_2843 3425101 - 3424565 - | outer membrane chaperone Skp (OmpH) Dole_2844 3427931 - 3425190 - | surface antigen (D15) TERM 5421 3426870 - 3426892 + g 76 -7.1 -4.42667 | CGACGATGTGAGCCA CCAGAAGAA TCCTT TTTTTCTGG TTTTGATGATTTTGC TERM 5422 3427525 - 3427509 - G 74 -2.1 -5.00616 | overlap 3427510 CCCCTGGCCAAAAAA CCGGCGA AGT TCCCCGC TGTCCGCGGAAAGCA Dole_2845 3428673 - 3427933 - | ABC transporter-related protein TERM 5423 3428473 - 3428442 - G 73 -2.8 -4.86731 | gap 1 GGCCTTCAAACAAAA GGGTGCCCCTG-TCC GGC GGATCCAGTGCCCCC AGTATCTGGAGAAAG Dole_2846 3429892 - 3428666 - | LolC/E family lipoprotein releasing system, transmembrane protein TERM 5424 3428906 - 3428882 - G 100 -9.9 -5.07053 | AAGCACGCCAAAAAA GAGGCCCAGCA GGG TGCCGGCCCCC CCGATGATCATGCCC Dole_2847 3431389 - 3429935 - | lysyl-tRNA synthetase Dole_2848 3432967 - 3431522 - | histidine kinase Dole_2849 3434222 - 3433011 - | type II secretion system protein TERM 5425 3433490 - 3433469 - G 74 -2.1 -4.87786 | GGAACTTGAGAAAAA GGCCGTCCA TGAA CAGGCGACC CTTTTCCGTCTTGTA TERM 5426 3433977 - 3433961 - G 70 -3.7 -4.61482 | overlap 3433963 CCTGGGAAAAAAGAA TATCCAG ACA CTGAACA ATGGGCAGACCGGCA TERM 5427 3434633 - 3434618 - R 73 -3.2 -4.88228 | AGCTAATATCAAAAA GACGCA AGCA TCCGTC AAGGCGCGGCTCCGG Dole_2850 3435869 - 3434703 - | S-adenosylmethionine synthetase TERM 5428 3435087 - 3435076 - G 70 -3.6 -4.56597 | overlap 3435078 TCCTTGCCGGAAAAA CAGC CGCC GCCG TGACGGCCCATGCCG TERM 5429 3435743 - 3435756 + g 74 -2.3 -4.9218 | overlap 3435744 TGACAAGGGTTTCAC ATGCC ACGC GGCAG TTTTTGTCCTGGCTG TERM 5430 3436198 - 3436178 - H 100 -4.7 -6.06723 | TTCTTGAAAAAAAAA GCCACATGA TCA TAATATGGC CCTTTACATTCGGTC TERM 5431 3436459 - 3436475 + G 71 -7.9 -4.08216 | opp_overlap 3436458 AGCCCGGGGAAAACG CCGGGGA AAC TCCACGG TTTTACGGGGCCTCG Dole_2851 3436284 - 3437621 + | hypothetical protein TERM 5432 3437835 - 3437805 - g 79 -13.3 -3.15544 | overlap 3437790 CCGCAGCGCCACCAA GGTGACCGCCG AGGTCATTA CGGCGGCCACC AACCTCAAGGTGATC TERM 5433 3438212 - 3438179 - g 83 -4.5 -5.055 | overlap 3438181 TGAACCCGGAAAAAA TTCAGGAAGCCGGTT ACGA AAGCGTCTCCCTGGA TGAACTGTATGCCCG TERM 5434 3439169 - 3439148 - g 77 -7.9 -4.30576 | overlap 3439149 TGGTGATCATCAAAA CCGACGAGC CGGT GCCCGCCGA TATCCTTGAGACGCT Dole_2852 3437647 - 3439230 + | D-3-phosphoglycerate dehydrogenase TERM 5435 3439294 - 3439312 + F 87 -6.6 -5.15634 | opp_overlap 3439271 TGTTACGGATCTTTC CTGCCGGT GCA ACAGGCGG TTTTTTCATGCCCTG TERM 5436 3439449 - 3439459 + F 88 -2.4 -5.75945 | overlap 3439440 3439439 GGCAACGCCGCTGCT CCGG CCG CCTG TTTTTTTTCACACAT Dole_2853 3439491 - 3440291 + | methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase TERM 5437 3440653 - 3440632 - g 75 -5.8 -4.62069 | CTTTGACCTGAAAAA GAGCAACG TGGAGG CGGTGCTC TCCCTGTCCGCCTCT TERM 5438 3441153 - 3441174 + G 71 -12.9 -2.70704 | opp_overlap 3441147, overlap 3441152 3441149 TCGACACCACCGGCG CCGGCGACC TGTG GGCCGCCGG GTTCCTTTACGGGCT Dole_2854 3440333 - 3441319 + | ribokinase-like domain-containing protein Dole_2855 3441341 - 3442009 + | TPR repeat-containing protein Dole_2856 3443954 - 3442041 - | phospholipid/glycerol acyltransferase TERM 5439 3442771 - 3442751 - G 85 -11.1 -4.02817 | TGCCGATAAGAACAA TGGCGGCAA CAT TGGCCGCCA CCATGAACAGGGCGT TERM 5440 3443402 - 3443378 - G 71 -11.4 -3.31144 | gap 1, overlap 3443363 CCGCGATGGCCACAA CGGCCCC-GCC GATG AGCAGGGGCCG GTCCGGGTGGGCCAG TERM 5441 3443586 - 3443573 - G 89 -3.7 -5.52384 | CCCCCATGAAAAAAA GCAGC GCCA GCAGC AGGGCAATGCTGTTC TERM 5442 3443748 - 3443738 - G 93 -8.2 -5.19328 | overlap 3443740 AGGGCAGAATAAAAA GGCC GGC GGCC AGGTTGACCAGAATG TERM 5443 3443894 - 3443880 - G 72 -5.6 -4.54301 | GAAAAAAGGAAGAAA CCGCCG GGT CGACAG CAGCCCGAACTGGCC TERM 5444 3444188 - 3444163 - R 90 -14 -2.93623 | gap 1, overlap 3444158 3444160 GCCGGGAAAAGAGGA GCGGGGGGCGG GAGTG CCGCCCCCC-C GGTGACATCAATGAC Dole_2857 3444475 - 3444203 - | histone family protein DNA-binding protein Dole_2858 3445448 - 3444657 - | metal dependent phosphohydrolase TERM 5445 3445371 - 3445353 - G 71 -7.3 -4.10855 | opp_overlap 3445365, overlap 3445354 AAAATCGCGGTAAAA GTCCGGC TGCGG GCCGGCC TCCGCCATTTGCCGG Dole_2859 3446430 - 3445438 - | molybdenum cofactor biosynthesis protein A Dole_2860 3447417 - 3446440 - | glycosyl transferase family protein TERM 5446 3446905 - 3446869 - G 72 -4.9 -4.59309 | opp_overlap 3446890 AAAAAAAAGCGAAAA CAGGGGTCGCACCACCA GCT CGGTGACCCGGCCGCCG CCGCTGGCCACCACT Dole_2861 3448567 - 3447398 - | hypothetical protein TERM 5447 3448581 - 3448610 + H 80 -7.1 -4.62872 | overlap 3448582 3448607 3448608 ATTTTCTTTCCACCG GGGCTTGTTTGTC TGCG GGCGAACAGGCCG TTTTTACGGGTTCAT TERM 5448 3448582 - 3448609 + H 75 -10.6 -3.37 | overlap 3448581 3448607 3448608 TTTTCTTTCCACCGG GGCTTGTTTGTC TGCG GGCGAACAGGCC GTTTTTACGGGTTCA Dole_2862 3448677 - 3449369 + | phosphoglycerate mutase Dole_2863 3449425 - 3449859 + | hypothetical protein TERM 5449 3449988 - 3449951 - g 84 -2.6 -5.45802 | gap 1, opp_overlap 3449972 GCCGGAAAAGAAAAA CGCCCTC-TCCCCGG AGGTGCTGG CCGAGGTCGAGGCCG TGTTTACCGCACTGG TERM 5450 3450030 - 3450050 + G 95 -7.5 -5.40072 | overlap 3450036 3450037 GATGTTCACGTGGTG GTGTTCACC GGC GGAGAGCAC TTTTTTTCCGCCGGG Dole_2864 3449874 - 3450647 + | enoyl-CoA hydratase/isomerase TERM 5451 3451234 - 3451246 + T 73 -7.7 -3.97636 | opp_overlap 3451234 3451232 AAAACTTTACAAACA CCGAA ACT TTCGG TTTATAAATTGAAAT Dole_2865 3451849 - 3451427 - | hypothetical protein Dole_2866 3453083 - 3452103 - | nifR3 family TIM-barrel protein TERM 5452 3452154 - 3452168 + g 78 -7.8 -4.55287 | GTAATCGGACACGGC GGCCAG GAC CTGGTC TTTTGTCTCAATCCG TERM 5453 3452413 - 3452387 - G 79 -7.1 -4.57569 | overlap 3452388 TGATCTGTTTAAAAA TCCAGGGCGCC CCGAT GGCGGCCCGGC CCACCATCACCGCGT TERM 5454 3452716 - 3452762 + g 95 -13.8 -4.24338 | gap 2, overlap 3452761 ACCGCCTGGATCACC TCCGCGGCCAGGGGCAGGTCCT TCATC AGGGCC-GCCCCTGCTC-CGGA TTTTAAAATCTTTTT TERM 5455 3452761 - 3452772 + g 76 -3 -5.00616 | overlap 3452716 GCCGCCCCTGCTCCG GATT TTAA AATC TTTTTTACCGAGCAG Dole_2867 3453798 - 3453121 - | hypothetical protein TERM 5456 3453905 - 3453923 + H 80 -4.6 -5.0133 | GTAGTTGACCCGGCT GACTGT TTTGGCT ACAGTC TTTTTTCAAACCATC TERM 5457 3454034 - 3454021 - g 80 -4.5 -5.00616 | overlap 3454024 GGCGGTTTTAAAAAA CCACA CAAC CGTGG CCGTGGTCGGCATCT TERM 5458 3454326 - 3454316 - g 71 -8.2 -4.0896 | overlap 3454304 3454317 AAAGCCGCGCGAAAA GCCG AGG CGGC CGGGCTTCGCGTAAT Dole_2868 3453953 - 3454402 + | CoA-binding domain-containing protein TERM 5459 3454511 - 3454476 - T 100 -21.2 -5.02074 | overlap 3454478 CGACTCCGCAAAAAA GGGCCGGTCATGGCCG CAAG CAGCCATGACCGGCGC GAGAAACAGGTCAAT TERM 5460 3454509 - 3454478 - T 100 -22.4 -2.75975 | overlap 3454476 ACTCCGCAAAAAAGG GCCGGTCATGGCCG CAAG CAGCCATGACCGGC GCGAGAAACAGGTCA Dole_2869 3455018 - 3454833 - | hypothetical protein Dole_2870 3455452 - 3455072 - | desulfoferrodoxin TERM 5461 3455162 - 3455149 - G 80 -4.5 -4.91109 | gap 1 CGGCCATCACAAAAA CG-GCC TCG GGCGCG TCTCCGGGCTTGAGG Dole_2871 3458568 - 3455605 - | peptidase M16C associated domain-containing protein TERM 5462 3457196 - 3457157 - G 74 -7.8 -4.13767 | gap 1, opp_overlap 3457159, overlap 3457161 GGTTCCAGGGTAAAA CGCACCCGGTGGGGGTTGT TTA AAAACCACCGCCGGAT-CG AATTTTCCAGAAACG TERM 5463 3457667 - 3457689 + g 95 -6.9 -5.41143 | overlap 3457669 3457681 TGCACATCGGCCATG AGCCAGGCC ACGCA GGCCTGGTA TTTTTTTGCCGGGTC TERM 5464 3457669 - 3457687 + g 93 -11.7 -4.34482 | overlap 3457667 3457681 CACATCGGCCATGAG CCAGGCC ACGCA GGCCTGG TATTTTTTTGCCGGG Dole_2872 3459005 - 3458625 - | hypothetical protein TERM 5465 3458783 - 3458821 + g 73 -13.1 -2.72043 | gap 1, overlap 3458782 3458816 GCTGAACCGCTTCCA GCACCGTGCTGGTGGCGG ACGT CCGGCGC-AGCCCGGTGC CTTTGACGGCCCGTT TERM 5466 3458844 - 3458871 + g 100 -14.8 -4.58283 | overlap 3458841 GGCCCGTTTCTGGGC GGTGGCGGCCGC CTTT GCGGTTGCCGCC TTTTTAACAGCCTTC TERM 5467 3459045 - 3459066 + r 90 -3 -5.73672 | gap 1, opp_overlap 3459040 GAATAAAACAGCCCG GCCTGT-TG CAAAA CACACGGGC TTTTTTTACTTATTT TERM 5468 3459260 - 3459288 + r 75 -5.2 -4.66609 | gap 1, overlap 3459262 CGGAGGGAGTGCTGC TACCGCCACTGCC ACAC GGCC-TGGCGGTC TTTTTCGATAAAGTG TERM 5469 3459262 - 3459286 + r 70 -7.8 -3.94812 | gap 1, overlap 3459260 GAGGGAGTGCTGCTA CCGCCACTGCC ACAC GGCC-TGGCGG TCTTTTTCGATAAAG Dole_2873 3460821 - 3459259 - | radical SAM domain-containing protein TERM 5470 3460899 - 3460889 - H 74 -4 -4.92239 | CGAAAAAGTTAAAAA TTCA GGC TGAA GGAAAATATGCAAAT TERM 5471 3460955 - 3460937 - H 74 -3.1 -5.07486 | overlap 3460939 3460954 GAGTGTCAATAAAAA GGTTTGG CCCCT CCAAATC GAAATCGCTATCGCT TERM 5472 3461017 - 3461032 + H 73 -2.5 -5.1523 | GCGGTGGGGAAACAG GTTGC GCAGGG GCGAC TTTTTCTGTTATAAA Dole_2874 3461139 - 3461516 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 5473 3461610 - 3461596 - f 71 -6.4 -4.15044 | GTGGGTTCCAACAAA GGCAAG CAA CTTACC AACCCATAAACAGGA TERM 5474 3463122 - 3463132 + G 70 -2.4 -4.84359 | opp_overlap 3463107, overlap 3463107 3463106 GGCCGTGGCCGTGCT GCTG GCC CTGC TTTTTCTGGGCGTCA Dole_2875 3461635 - 3463281 + | hydroxylamine reductase TERM 5475 3463304 - 3463333 + F 100 -14.9 -5.40072 | GATTGTTTCCTCCCG CGGCGCGTCCGGT GTAT GCCGGGCACGCCG TTTTTTTACGACAAA TERM 5476 3463765 - 3463747 - f 100 -16 -3.05384 | CTTCGCGCGAGGGAA GCCACGCC TGT GGCGTGGC CAAGCTGCGGGGCGC TERM 5477 3463770 - 3463782 + F 71 -6.9 -4.29953 | overlap 3463767 TGTGGCGTGGCCAAG CTGCG GGG CGCGG TTCTTTTGGTACTTT Dole_2876 3463956 - 3464360 + | ArsR family transcriptional regulator TERM 5478 3464363 - 3464353 - f 71 -6.8 -4.17958 | AACAGCCTGAACAAA GGGT CTA ACCC GGATATTTCACGAGT TERM 5479 3464803 - 3464817 + G 73 -3.4 -4.8622 | overlap 3464784 3464804 GAGCATGTACTCACC TGCCTG ATT CCGGCG TTTTTCATTGCCGGC TERM 5480 3464986 - 3465015 + G 78 -8.5 -4.2074 | gap 1, opp_overlap 3464982 GCCGGAATCTATACC CG-GGGGGCCGG CATCGGC CCGGCCACCGCG TTTCTCTATTCCGGC TERM 5481 3465248 - 3465265 + G 77 -7.7 -4.31587 | AAGACGGCCTGTATA TCGGCAC CATG GTGCTGA TTCTTATTTTTGCCG TERM 5482 3465462 - 3465489 + G 75 -9 -3.96148 | overlap 3465474 GCAGATATTTCCCCT GCTGGCCGGCGG GGTC CTGGTGGCCGGC TTTCTGCTGGGACGG Dole_2877 3464659 - 3465831 + | permease TERM 5483 3466006 - 3465991 - g 72 -6 -4.26903 | opp_overlap 3465992, overlap 3465992 CCGACCTGATGAAAA TCGCCG GATA CGGCGT GTTCGGCACACCCGC Dole_2878 3465867 - 3466100 + | redox-active disulfide protein 2 TERM 5484 3466322 - 3466288 - g 86 -5.7 -5.10064 | gap 2, overlap 3466311 3466313 TGGAAGACATAAAAA CCGCCACCGGAGCCTGT ACA AAAGGC-C-GGTGCCGG GAAACCAGCCCGAGA Dole_2879 3466143 - 3466346 + | hypothetical protein Dole_2880 3466416 - 3466937 + | Fe-S cluster domain-containing protein TERM 5485 3467096 - 3467084 - g 93 -5.5 -5.47218 | overlap 3467093 3467094 GGGCATTGAAAAAAA GGGAT TAA ACCCC CTGGCCGTGCGGGCC TERM 5486 3467340 - 3467294 - g 83 -7.9 -4.59853 | GGAACTGGCGAAAAA CGAGCCCACCGACGA-AGCGGCC ATG GCCCACTATCGCCGG-GTGCGCG ACGAAATTCGGGACT Dole_2881 3466956 - 3467393 + | protein tyrosine phosphatase Dole_2882 3467409 - 3468599 + | arsenical-resistance protein TERM 5487 3468736 - 3468696 - g 100 -12.6 -4.49981 | gap 2 GACAGCACGATAAAA CAGGCG--CTCCGGCAGGGA CTT TCCCTGCTGGTGATCGCCTG GGTCCTGGCCCTGGG TERM 5488 3468875 - 3468888 + G 79 -5.2 -4.82901 | CGTGGTCCTGTATGA CCGC AGGGAA GCGG TTTTTGTGGACGCCC Dole_2883 3468663 - 3469181 + | rhodanese domain-containing protein TERM 5489 3469342 - 3469320 - g 71 -11.2 -3.29144 | CGACGCCGTGCATAA CCTGGGAGAC TTT GCCTCCCTGG TGGTGGCCTACGGGG Dole_2884 3469171 - 3470094 + | cation diffusion facilitator family transporter TERM 5490 3470132 - 3470156 + G 79 -5.5 -4.82901 | overlap 3470134 3470148 3470150 3470151 CGCAACACACCCCTC GCCTGGCTGCC GCT GGCAGGCCGCC TTTTTCTGGGCGGCG TERM 5491 3470355 - 3470372 + G 85 -3.3 -5.40072 | overlap 3470353 GCGCCCTGGTCTGGG CCAACGG CCTG CTGTGGG TTTTTTTCGCGGCCC TERM 5492 3470485 - 3470495 + G 77 -8.2 -4.32034 | overlap 3470480 GGCCTGGTACCTGGT CCGG GAC CCGG TTTTCCTCGTGATCG Dole_2885 3470099 - 3470584 + | DoxX family protein TERM 5493 3470679 - 3470663 - g 71 -7.2 -4.1964 | CGGAAGATGGCAAAA CAGCGG CCATT CCGCCG GTACCCACACCGGGC Dole_2886 3470581 - 3470982 + | thioredoxin domain-containing protein TERM 5494 3471037 - 3471049 + G 91 -6.9 -5.24531 | GCGGCATCGGCATCG CGGCC CTG GGCTG TTTTTTGTGGGGCAT TERM 5495 3471141 - 3471164 + G 80 -10.2 -4.07568 | gap 1, overlap 3471154 3471157 GCGGGCCAGGAGCGG GGCCTGCGCCC CCG GAGCGC-GGCC TTTTACGCCGCCGCC Dole_2887 3470979 - 3471689 + | cytochrome c biogenesis protein transmembrane region Dole_2888 3472122 - 3471784 - | hypothetical protein TERM 5496 3472136 - 3472154 + r 85 -10.2 -4.10855 | overlap 3472137 AATAGAAGCGGCTTT CTCCGGGC AGT GCCCGGAA TTTTGCGCACATTTT TERM 5497 3472137 - 3472153 + r 86 -13.7 -3.0579 | overlap 3472136 ATAGAAGCGGCTTTC TCCGGGC AGT GCCCGGA ATTTTGCGCACATTT TERM 5498 3472244 - 3472266 + r 80 -4.1 -5.20333 | gap 1 GCAAGCCGCGGACAT CAGCTGCACC GCAT GGTTC-GCTG TTTTTATTATAGCTC Dole_2889 3472587 - 3472273 - | XRE family plasmid maintenance system antidote protein Dole_2890 3472877 - 3472599 - | plasmid maintenance system killer TERM 5499 3473162 - 3473142 - R 71 -8.4 -3.65351 | GCAGCCTCACGCAAA CGCTTTTT TCGGG AAAAAGCG GGCAGGCTGTTTGAG Dole_2891 3474400 - 3473501 - | hypothetical protein TERM 5500 3473824 - 3473801 - G 73 -3 -4.75404 | AAAGGTCACGAAAAA GGGGGCGA TGATGGAG CCGCCGCC GATGCCGTAAATGCC TERM 5501 3473960 - 3473999 + g 78 -6.3 -4.64992 | gap 1, overlap 3473954 3473950 3473959 CACGCGGACGGCGCC GC-CGCCGCCAACCGGGC CGGCC GCCTCCTTTGCGGCGCGC TTTCTGTTTTTTACC TERM 5502 3474316 - 3474299 - G 71 -8.3 -3.99324 | GGGCAGCAGCAGAAA GGCGCCG GACA CGCCGCC CATGGAGGTGAAAAA TERM 5503 3475039 - 3475052 + G 74 -2.3 -4.96848 | opp_overlap 3475039, overlap 3475040 GGTAACCGTGGAAAC CGGCA GCCC TGCCC TTTTTCTGTGCACCA Dole_2892 3474572 - 3475255 + | TetR family transcriptional regulator TERM 5504 3476027 - 3476004 - g 74 -8.1 -4.11295 | opp_overlap 3476023 3476026 TGAAATGGAGACAAA CGTTCCGGG CAGCTT CCTGGAACG CCACACATGGCACTC Dole_2893 3475243 - 3476061 + | hypothetical protein Dole_2894 3476132 - 3477325 + | RND family efflux transporter MFP subunit TERM 5505 3478701 - 3478711 + G 83 -8.2 -4.59853 | TGGCCGCTGTGTTTG GGCC CAT GGCC TTTTTCGGCGGTTCC TERM 5506 3479363 - 3479391 + G 72 -6.5 -4.35926 | overlap 3479364 GCTTTTGCCCCGCCC TCGGTGCCCGAAC TGG GCACGGCCACCGG TTTTGAGTTTCAGCT Dole_2895 3477338 - 3480517 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 5507 3480875 - 3480861 - g 71 -12.8 -2.57931 | opp_overlap 3480860 3480859 3480857, overlap 3480860 3480839 GGCACCGGCTACAAG GGCCGG GTG CCGGCC GATCTTTCCAGTTCC TERM 5508 3481442 - 3481457 + G 90 -6 -5.28481 | opp_overlap 3481411, overlap 3481439 3481443 CTATGCCAACATCGG CGCGGC CCGG GCCGCC TTTTTTCCTTCCATC TERM 5509 3481443 - 3481456 + G 72 -9.5 -3.76004 | opp_overlap 3481411, overlap 3481439 3481442 TATGCCAACATCGGC GCGGC CCGG GCCGC CTTTTTTCCTTCCAT Dole_2896 3480519 - 3481952 + | RND efflux system outer membrane lipoprotein Dole_2897 3481973 - 3482878 + | outer membrane phospholipase A TERM 5510 3483899 - 3483889 - g 77 -8.2 -4.25848 | opp_overlap 3483889 AATGGCCCAGGAAAA CGGC CAG GCCG TTATGCTTCGCCTGC TERM 5511 3484505 - 3484493 - g 71 -10.5 -3.53012 | TCGGTGCTGGCCAAA GGGGC CCG GCCCC TGGTGATGAACCTTC Dole_2898 3483494 - 3484780 + | peptidase C14 caspase catalytic subunit p20 TERM 5512 3485129 - 3485107 - g 70 -12 -2.72463 | ATTTATGGGGAATCA CTGCGTTGCA GCT TGCAGCGCAG GAGGGGCATGTGCAA Dole_2899 3484851 - 3486179 + | ankyrin TERM 5513 3486670 - 3486692 + G 70 -2.6 -4.72272 | opp_overlap 3486677, overlap 3486669 3486672 3486674 CGCCGCCTCTGTATT GAGACGATGG ACG TCATCATCGC TTTTTGATGAGGACG Dole_2900 3486185 - 3487579 + | peptidase C14 caspase catalytic subunit p20 TERM 5514 3487570 - 3487558 - f 73 -4.8 -4.79223 | opp_overlap 3487566 GGATACGATTAAAAA CAGG TTCAG CCTG ATAGAATAAGGCCTT TERM 5515 3488029 - 3488045 + G 74 -2.1 -5.02074 | opp_overlap 3488020 3488029, overlap 3488031 AACCGAGTTAAAAGA GGGGGAC CCG GTCCAGC TTTTTTACCAGGTCA Dole_2901 3487607 - 3488431 + | hypothetical protein Dole_2902 3488449 - 3488922 + | CMP/dCMP deaminase zinc-binding TERM 5516 3489450 - 3489430 - g 81 -3.9 -5.0538 | overlap 3489438 CTGGACCGCAAAAAA CAGGAAGAC CAC GACTTTCTG CCGTGGGACATTGTG TERM 5517 3489707 - 3489695 - g 83 -4.7 -5.15117 | overlap 3489685 CAAAAGGCGAAAAAA CCGGG GTT CCCTG CCTGCTCACCGCCGC TERM 5518 3490167 - 3490179 + G 71 -10.5 -3.53091 | overlap 3490174 CTTTGGCACGGGCGT GGCCC GGG GGGCC TTTGAAAAGGCGGCT TERM 5519 3490206 - 3490188 - g 75 -8.8 -4.07568 | opp_overlap 3490174 GGGGGCCTTTGAAAA GGCGGC TTCCTTT GCCGCC ACCACCCGGGTCAAC TERM 5520 3490570 - 3490557 - g 79 -5.9 -4.72272 | overlap 3490560 CGCGGGCATGAAAAA CAGCC ACCT GGCCG TGGAGCTGATGGGCC Dole_2903 3489235 - 3490743 + | acyl-CoA dehydrogenase domain-containing protein Dole_2904 3490762 - 3491904 + | acyl-CoA dehydrogenase type 2 TERM 5521 3492124 - 3492139 + G 90 -4.6 -5.40072 | opp_overlap 3492118 3492120 TTTAAATCACAGGGA GTCACC TGCC GGGGAC TTTTTTTCAGGGCCG Dole_2905 3492082 - 3492969 + | hypothetical protein TERM 5522 3493133 - 3493122 - T 73 -7.2 -4.25104 | TGCCCCGCAGCAAAA CGCC TGAC GGCG TCACTACAAACAAAG TERM 5523 3493169 - 3493148 - T 77 -6.5 -4.59342 | GTCACTACAAACAAA GCGACGAAG CAAT CTCCTTCGC ATCTGTTCAACACTG TERM 5524 3493411 - 3493448 + T 78 -9.3 -4.12599 | opp_overlap 3493411, overlap 3493417 CAAATTTTCAATAAA GAAGAAGGGTTAGCC GGATCAAA GGTTAGCCCTTTTTC TTTTACCCCATTGTT TERM 5525 3493417 - 3493442 + T 85 -4.7 -5.45802 | opp_overlap 3493411, overlap 3493411 TTCAATAAAGAAGAA GGGTTAGCC GGATCAAA GGTTAGCCC TTTTTCTTTTACCCC Dole_2906 3494524 - 3493451 - | integrase family protein TERM 5526 3493796 - 3493808 + g 77 -7.7 -4.37886 | opp_overlap 3493795, overlap 3493785 GACGTCGGGAGAACG CCGAT TAA ATCGG TTTTGTAAAACATCG TERM 5527 3494268 - 3494295 + g 73 -2.8 -4.78149 | gap 1 TTAGCCCATCGCCGC GCCATATACAGAT AGG ATATGTA-GTGGC TTTTTGAATTATAGG TERM 5528 3494310 - 3494327 + g 70 -4.9 -4.41047 | gap 1, overlap 3494312 3494313 CTTTTTGAATTATAG GCTTTGAC ATG GTCAA-GC TTTTGGTTCACCAGT TERM 5529 3494377 - 3494387 + g 84 -2.4 -5.43487 | opp_overlap 3494377 TTGGCGTCTCCAGAA CCGG CTT CGGG TTTTTTATCTCCTTT TERM 5530 3494827 - 3494817 - H 95 -4 -5.75342 | TTTGTTGAAAAAAAA CATT TTC AATG TAAACCTCTACATAT Dole_2907 3495029 - 3495424 + | hypothetical protein Dole_2908 3495421 - 3496332 + | hypothetical protein TERM 5531 3496439 - 3496402 - f 81 -12.1 -3.04248 | opp_overlap 3496405 3496406, overlap 3496405 3496414 TAATATCCCTGAAGA CCACTGCCAATACGCAG CATA CTGCGTATTGGCAATTT TTCATCTATTTTGTT TERM 5532 3496436 - 3496405 - f 100 -18.2 -2.74192 | opp_overlap 3496405 3496406, overlap 3496402 3496414 TATCCCTGAAGACCA CTGCCAATACGCAG CATA CTGCGTATTGGCAA TTTTTCATCTATTTT TERM 5533 3496405 - 3496436 + F 100 -16 -4.91573 | opp_overlap 3496405 3496402 3496414, overlap 3496406 TATCCCTGAAGACCA CTGCCAATACGCAG CATA CTGCGTATTGGCAA TTTTTCATCTATTTT TERM 5534 3496406 - 3496435 + F 100 -19.5 -3.52503 | opp_overlap 3496405 3496402 3496414, overlap 3496405 ATCCCTGAAGACCAC TGCCAATACGCAG CATA CTGCGTATTGGCA ATTTTTCATCTATTT Dole_2909 3496626 - 3497768 + | hypothetical protein TERM 5535 3497779 - 3497812 + F 100 -18.1 -5.27335 | AATAACCCTATTGCA GCCCCTCCCTTGGCC GCTT GGTCTGGGGAGGGGC TTTTTCTTTAAGGAG Dole_2910 3498203 - 3498718 + | hypothetical protein TERM 5536 3498733 - 3498746 + F 75 -8.1 -4.14739 | opp_overlap 3498733 AGATTAGCGCAAAAA CGCAG CTTC CTGCG TTTTCCCCTAGATAG TERM 5537 3498746 - 3498733 - f 81 -8.1 -4.63928 | opp_overlap 3498733 AGATTAGCGCAAAAA CGCAG CTTC CTGCG TTTTCCCCTAGATAG TERM 5538 3498759 - 3498786 + F 100 -15 -5.63517 | opp_overlap 3498761 GCGTTTTCCCCTAGA TAGGGCAGATTC AAAC GAGTCTGCCCTA TTTTTTCTTTGCCCC TERM 5539 3498784 - 3498761 - f 74 -11 -2.87132 | opp_overlap 3498759 GTTTTCCCCTAGATA GGGCAGATTC AAAC GAGTCTGCCC TATTTTTTCTTTGCC TERM 5540 3499646 - 3499614 - g 74 -7.8 -4.21954 | gap 2, opp_overlap 3499614, overlap 3499611 CGAAGACATAAACAA GGCGTTGTCCCGCCTT TTA AAGG-GGGAC-ACGAC GAGCCAAGTCAATAT TERM 5541 3501173 - 3501161 - g 71 -7.7 -4.04318 | overlap 3501137 3501136 TGCACACAGGAGAAA GCTTG GAA CAAGC AAAATACAACTATCA TERM 5542 3501243 - 3501228 - g 83 -4.6 -5.14163 | overlap 3501229 ATTCATTAAGAAAAA GTGCGC TAAG GCGCAA GCGACTGATAACTAT TERM 5543 3501348 - 3501333 - g 76 -3.2 -5.00616 | opp_overlap 3501319 TGTCCTGTCAAAAAA GGACTT TAGA AAGACC TTGGAGAACAGTGGG Dole_2911 3499120 - 3501429 + | P4 family phage/plasmid primase TERM 5544 3501508 - 3501485 - f 82 -5.4 -5.16572 | opp_overlap 3501483 3501485, overlap 3501487 ATTTAAGTGAAAAAA TATATCTAAC CAAT GTTAGATAAA TAATTTTTTTAATCT TERM 5545 3501506 - 3501487 - f 75 -8 -4.20888 | opp_overlap 3501485 3501483, overlap 3501485 TTAAGTGAAAAAATA TATCTAAC CAAT GTTAGATA AATAATTTTTTTAAT TERM 5546 3501895 - 3501881 - g 84 -2.1 -5.33985 | opp_overlap 3501885, overlap 3501885 TTGAAAAAAAAGAAA CAACT ACAAA AGCTG TACTTATAAAAAAAC Dole_2912 3501838 - 3502155 + | hypothetical protein TERM 5547 3502163 - 3502201 + T 88 -11.7 -3.82191 | opp_overlap 3502165, overlap 3502165 ATGAATAATCGAAAA AACCCCATGCCCTCCCT CCATC AGGCAGGACATGGGGTC TTGTTATCCGGTTAA TERM 5548 3502199 - 3502165 - T 100 -16.5 -5.2166 | opp_overlap 3502163 3502165 GAATAATCGAAAAAA CCCCATGCCCTCCCT CCATC AGGCAGGACATGGGG TCTTGTTATCCGGTT TERM 5549 3502165 - 3502199 + T 93 -14.3 -3.49226 | opp_overlap 3502165, overlap 3502163 GAATAATCGAAAAAA CCCCATGCCCTCCCT CCATC AGGCAGGACATGGGG TCTTGTTATCCGGTT Dole_2913 3502476 - 3502213 - | hypothetical protein Dole_2914 3502921 - 3502457 - | hypothetical protein Dole_2915 3503136 - 3502933 - | hypothetical protein Dole_2916 3503666 - 3503163 - | DNA repair protein RadC Dole_2917 3504603 - 3503677 - | hypothetical protein Dole_2918 3505295 - 3504732 - | hypothetical protein Dole_2919 3507298 - 3505433 - | UvrD/REP helicase TERM 5550 3506390 - 3506400 + g 84 -6.8 -4.75063 | GACCTCCTCACCGTC CGGA TTG TCCG TTTTTAAGGTTTTAT TERM 5551 3506874 - 3506888 + g 75 -5.7 -4.56597 | ACCCGGAACTCCTCG CAACC GATCA GGTTG TTTTTCGCCAGGGAG Dole_2920 3507588 - 3507295 - | hypothetical protein TERM 5552 3507414 - 3507424 + g 74 -2.4 -4.88711 | opp_overlap 3507411, overlap 3507385 3507412 CATCGGAATGGATCT GCCG ACG CAGC TTTTTGATGTATTCT Dole_2921 3508393 - 3507569 - | hypothetical protein TERM 5553 3508419 - 3508455 + r 100 -9.4 -4.75174 | opp_overlap 3508419 CCATAAAATAAGAAA GGGACAGAAAAGCCCA TGTTC TGAGCCTTCCTGTCCC TTTTTGGGTTAAATG TERM 5554 3508455 - 3508419 - R 100 -16 -4.72617 | opp_overlap 3508419 CCATAAAATAAGAAA GGGACAGAAAAGCCCA TGTTC TGAGCCTTCCTGTCCC TTTTTGGGTTAAATG Dole_2922 3509455 - 3508490 - | zinc finger SWIM domain-containing protein TERM 5555 3508755 - 3508768 + g 78 -3.7 -5.0133 | overlap 3508757 GGGTTATTGTTCTGT GCGGC CGGG GCCTC TTTTTTAGCGGGCTG TERM 5556 3508785 - 3508798 + g 74 -2.3 -5.00616 | overlap 3508757 TTTTTAGCGGGCTGG GCCTT TACC GGGGC TTTTTTCCGGGAGGG Dole_2923 3509930 - 3509568 - | single-strand binding protein Dole_2924 3510163 - 3510423 + | hypothetical protein TERM 5557 3510482 - 3510492 + F 73 -4.6 -4.68593 | AACAATGCCTTTGAC CGGG CCG CCTG TTTTTACATGGTCAA TERM 5558 3511500 - 3511490 - g 72 -4.6 -4.58685 | AAACTGGTGGAAAAA CGGG GAG CCCA AGAGAGATAAAAAAG TERM 5559 3511529 - 3511515 - g 87 -4.3 -5.46276 | AAGAGAGATAAAAAA GGTAA GCCCA TTACC AATAAAGACGGTTCT Dole_2925 3510579 - 3512621 + | N-6 DNA methylase Dole_2926 3512623 - 3513927 + | restriction modification system DNA specificity subunit TERM 5560 3515664 - 3515686 + G 76 -2.8 -5.00616 | gap 1 GCTTTTAAAATACTT TGATCGATC CGAACT GA-CGATCA TTTTTTCCACCGGCA TERM 5561 3516311 - 3516297 - g 70 -4.2 -4.5787 | TCATCAAAAAAAATA TCGGTG GCT CAACGA GATTTATGAGATTTA Dole_2927 3513931 - 3516993 + | HsdR family type I site-specific deoxyribonuclease TERM 5562 3517044 - 3517028 - g 100 -5.1 -5.69473 | overlap 3517038 TACATTACAAAAAAA GGACATA AAG CATGCCC GGATAAAGGTCGCTG TERM 5563 3517315 - 3517301 - g 75 -5.7 -4.57073 | CATCCGGGCCAAAAA GGATC TTCTT GATCC TGCAATTCAAAAGAA Dole_2928 3516990 - 3517649 + | hypothetical protein TERM 5564 3517815 - 3517803 - T 79 -3.3 -5.24531 | ATCCTTTACAAAAAA GGGCT TGA AGACC GGATTCAAAGCGATT Dole_2929 3518991 - 3517786 - | hypothetical protein Dole_2930 3524890 - 3518996 - | hypothetical protein TERM 5565 3520967 - 3520950 - G 100 -5.6 -5.65177 | AGATCCAGAAAAAAA GCAAAG TGAGAG CTTTGC GGCCGGTAAAATTTT TERM 5566 3523834 - 3523848 + g 78 -2.8 -5.16841 | overlap 3523836 CTTTATCAGTAGTTA TATCGG TGA CTGATG TTTTTCTTAATGTCC Dole_2931 3525639 - 3524887 - | hypothetical protein TERM 5567 3525637 - 3525617 - G 78 -6.1 -4.56597 | opp_overlap 3525628 3525633, overlap 3525601 GGTTTTTGGCAAAAA GCACAGGTC TGG GATCTATGC ATGGCATATTCCTTT Dole_2932 3526691 - 3525957 - | nuclease Dole_2933 3528018 - 3526849 - | SecC motif-containing protein Dole_2934 3529091 - 3528729 - | hypothetical protein Dole_2935 3529582 - 3529097 - | hypothetical protein TERM 5568 3530237 - 3530208 - g 79 -5.7 -4.82901 | opp_overlap 3530210, overlap 3530210 GCTGTGTGACAAAAA GCCCTTACAGGAA GGCT TTCTTGCAAGGTC TCAAGATGGAATACT TERM 5569 3531041 - 3531022 - g 78 -2.8 -5.15634 | TATTTCATGAAAAAA GCCGGT ATTGCCCA ACCGAC TGTCTTCAACGTTTC Dole_2936 3529858 - 3532356 + | hypothetical protein Dole_2937 3532380 - 3533195 + | hypothetical protein TERM 5570 3533799 - 3533787 - g 75 -5.5 -4.67635 | opp_overlap 3533787 3533788, overlap 3533779 3533788 TTGAAAAGGATAAAA CCCTG TCT CAGGA TTTCTGTCAACAATG Dole_2938 3533294 - 3533905 + | hypothetical protein Dole_2939 3534713 - 3533928 - | hypothetical protein TERM 5571 3534133 - 3534120 - G 70 -3.8 -4.70583 | opp_overlap 3534130, overlap 3534130 CTGACCAATAGAAAA CAGG GGAACA CCTG GAAGATCGGCTTCAA Dole_2940 3534953 - 3534753 - | hypothetical protein Dole_2941 3535230 - 3535039 - | hypothetical protein Dole_2942 3535519 - 3535211 - | hypothetical protein Dole_2943 3535867 - 3535535 - | hypothetical protein TERM 5572 3535927 - 3535894 - H 100 -8.1 -5.63517 | opp_overlap 3535917 CTTTTAAACAAAAAA GCCCCCAAGAATGAT GGTG ATCACTCAAGGAGGC TTAAAATAAAAATGG TERM 5573 3535938 - 3535977 + H 71 -5 -4.65168 | gap 1, opp_overlap 3535940, overlap 3535917 3535939 3535940 GAGGCTTAAAATAAA AATGGTCTCCTTGAGTGTG CTG CTTACTCA-GGAGACCAAC TTTTTCAGATCTCGT TERM 5574 3535940 - 3535975 + H 78 -12 -2.62545 | gap 1, opp_overlap 3535940, overlap 3535917 3535939 3535938 GGCTTAAAATAAAAA TGGTCTCCTTGAGTGTG CTG CTTACTCA-GGAGACCA ACTTTTTCAGATCTC TERM 5575 3535975 - 3535940 - H 100 -9.8 -5.45802 | gap 1, opp_overlap 3535917 3535940 3535939 3535938 GGCTTAAAATAAAAA TGGTCTCCTTGAGTGTG CTG CTTACTCA-GGAGACCA ACTTTTTCAGATCTC TERM 5576 3537297 - 3537285 - g 79 -5.5 -4.87052 | TATAAACCAACAAAA CCCGT GCA ACAGG AGGAGGGGCAGCAAC Dole_2944 3536619 - 3537887 + | hypothetical protein TERM 5577 3538784 - 3538812 + G 79 -12.5 -3.42768 | overlap 3538807 AGCAGCCTTGATTTG GTGGCAATACTGT TGG GCGGTATTGCCGC TTATGGCATTTTGAT Dole_2945 3538349 - 3538858 + | hypothetical protein TERM 5578 3538896 - 3538909 + G 77 -8.1 -4.34912 | overlap 3538893 3538907 ATCAATCCGCTACAC CTGCC TGCT GGCAG TTATTTTAATTGGTT Dole_2946 3538855 - 3539694 + | hypothetical protein TERM 5579 3539836 - 3539817 - f 77 -8.6 -4.27519 | gap 1, overlap 3539821 ACGCTACAAGAGAAA CTGACCCGT GAA ACGGG-CAG ACAAATTTATCTGTA TERM 5580 3540172 - 3540131 - g 71 -7.2 -4.1235 | gap 2, overlap 3540132 3540135 CAAGGCAAACAAGAA CTCACCGTCCGCTCCGGCGA AATC TCCCCGGA-CGGCCGG-GTG ATCCTAACCATGCCC TERM 5581 3540169 - 3540135 - g 70 -12.1 -2.7369 | gap 1, overlap 3540131 3540132 GCAAACAAGAACTCA CCGTCCGCTCCGGCGA AATC TCCCCGGA-CGGCCGG GTGATCCTAACCATG TERM 5582 3540843 - 3540824 - g 70 -3.6 -4.56597 | gap 1, opp_overlap 3540842 TTGCTGGTGGAAAAA GGCAA-AGA TGA CCTGTTGCC TGCGATTGCAGATCA TERM 5583 3540888 - 3540868 - g 74 -8.2 -4.12456 | opp_overlap 3540867 3540868, overlap 3540869 AGATCACTTGGAAAA CCGGCCTG CGGTT CAGGCCGC CTTATCCGGCAGTGT TERM 5584 3540887 - 3540869 - g 73 -11.7 -3.06991 | opp_overlap 3540868 3540867, overlap 3540868 GATCACTTGGAAAAC CGGCCTG CGGTT CAGGCCG CCTTATCCGGCAGTG TERM 5585 3540949 - 3540959 + G 70 -2.4 -4.72272 | opp_overlap 3540949, overlap 3540934 GACCGGGAAAAAAGC CCCG GAT CTGG TTTTTCATGCCCCGG Dole_2947 3539975 - 3541375 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 5586 3542004 - 3541970 - T 85 -5 -5.52384 | opp_overlap 3541971 3541974, overlap 3541971 3541974 GCTCCACCAAAAAAA TCAAGGGTTTAGGC AATAACA GCCTAAGCCCTTAT TTTTTGATATGTCAT TERM 5587 3542003 - 3541971 - T 73 -8.5 -3.90707 | opp_overlap 3541971 3541974, overlap 3541970 3541974 CTCCACCAAAAAAAT CAAGGGTTTAGGC AATAACA GCCTAAGCCCTTA TTTTTTGATATGTCA TERM 5588 3541971 - 3542003 + T 95 -8.5 -5.24989 | opp_overlap 3541971 3541970 3541974, overlap 3541974 CTCCACCAAAAAAAT CAAGGGTTTAGGC AATAACA GCCTAAGCCCTTA TTTTTTGATATGTCA TERM 5589 3542000 - 3541974 - T 73 -8 -4.06295 | opp_overlap 3541971 3541974, overlap 3541971 3541970 CACCAAAAAAATCAA GGGTTTAGGC AATAACA GCCTAAGCCC TTATTTTTTGATATG TERM 5590 3541974 - 3542000 + T 100 -10.2 -4.69962 | opp_overlap 3541974 3541971 3541970, overlap 3541971 CACCAAAAAAATCAA GGGTTTAGGC AATAACA GCCTAAGCCC TTATTTTTTGATATG TERM 5591 3542084 - 3542067 - T 100 -9.1 -6.09133 | opp_overlap 3542065 3542067 CAGGGCAAAAAAAAA CCCCGGA TTTC TCCAGGG TCCTTTTTGGTTCTG Dole_2948 3542825 - 3542127 - | hypothetical protein Dole_2949 3543456 - 3543944 + | hypothetical protein TERM 5592 3544114 - 3544100 - T 77 -2.8 -5.2696 | GGAAAACCTAAAAAA GCCTAA AAT TCAAGC CGCTCTTTTTCCCCG Dole_2950 3544390 - 3544142 - | hypothetical protein Dole_2951 3544848 - 3544558 - | hypothetical protein Dole_2952 3545587 - 3545171 - | hypothetical protein Dole_2953 3545897 - 3545622 - | hypothetical protein TERM 5593 3546104 - 3546128 + r 91 -11.4 -4.00468 | TAAATATTTCCTTGC CACCGGACGG CCGTA CCGTCCTGTG TTTATCGCTTATACT Dole_2954 3547434 - 3546205 - | integrase family protein TERM 5594 3546730 - 3546746 + g 70 -3.7 -4.57073 | GGATAACAGCGCCAT GTCATGA AGG TTGTGAC TTTTTGCCGCCAGTG TERM 5595 3547780 - 3547814 + H 100 -15.9 -3.90048 | opp_overlap 3547785, overlap 3547785 CAGCTCCACCACAAA AAAAAGCGCTTACGG AAAGA CCGTAAGCGCTTTTG TGTTTTTCGGGGGAA TERM 5596 3547809 - 3547785 - H 100 -15.8 -5.9873 | opp_overlap 3547785 3547780 CCACCACAAAAAAAA GCGCTTACGG AAAGA CCGTAAGCGC TTTTGTGTTTTTCGG TERM 5597 3547785 - 3547809 + H 100 -15.8 -4.98672 | opp_overlap 3547785, overlap 3547780 CCACCACAAAAAAAA GCGCTTACGG AAAGA CCGTAAGCGC TTTTGTGTTTTTCGG TERM 5598 3547991 - 3547977 - H 77 -2.9 -5.33405 | TCTATTAAACAAAAA TGATA TTTTC TATCA AGTTGCGTCGCTTCT Dole_2955 3548099 - 3549349 + | AAA family ATPase Dole_2956 3550562 - 3549531 - | AraC family transcriptional regulator TERM 5599 3549880 - 3549894 + g 73 -2.9 -4.72272 | AATAGATGCCGGCAC TCTTT TTCAT AAAGA TTTTTGGTCAGCACA TERM 5600 3549912 - 3549927 + g 71 -7.5 -4.11216 | TTTGGTCAGCACATT GGCGC AGGGCA GCGCC TTTTCAAGATACCGG Dole_2957 3550652 - 3551878 + | uroporphyrinogen-III decarboxylase-like protein TERM 5601 3552207 - 3552190 - g 77 -2.6 -5.04385 | overlap 3552195 GATATGGGGAAAAAA GGCAAG GTGATA CTGGCC ACCGTCAAAGGCGAC TERM 5602 3552335 - 3552317 - g 76 -3 -5.00616 | overlap 3552318 TTGCGTCCGAAAAAA TCGTTGCC GCT GTCAGCGA AACGGGAATACAGCT Dole_2958 3551923 - 3552573 + | cobalamin B12-binding domain-containing protein Dole_2959 3553585 - 3552590 - | hypothetical protein TERM 5603 3552960 - 3552989 + g 78 -8.5 -4.16279 | gap 1 ATGACGCGATGGACC TCCGGCCGCAGGTG GAT CAGCAG-GGCCGGA TTTTCAACTCCTGTG Dole_2960 3554888 - 3553599 - | hypothetical protein TERM 5604 3553702 - 3553690 - G 73 -3.3 -4.82901 | opp_overlap 3553701, overlap 3553692 CCCCGTGTATAAAAA TGGGC CAG GCGCA GCTCCACGCTGTCTT TERM 5605 3554564 - 3554552 - G 80 -10.5 -4.07568 | TGGCCCTGTCCAAAA GCCGG TCC CCGGC ATCCATGGCCATGAA Dole_2961 3556333 - 3555005 - | PhoH family protein TERM 5606 3556105 - 3556089 - G 90 -11.5 -4.38712 | overlap 3556102 TCGACCCGGACAAAA CCCCCGG AAT CCAGGGG CACGTCCTCGTGGAG Dole_2962 3557157 - 3556405 - | vitamin B12 dependent methionine synthase activation region TERM 5607 3556923 - 3556933 + g 70 -2.4 -4.82901 | GCAAAAGCCCGTTTC CGCG GAT CGCC TTTTTCTCCAGCGCC TERM 5608 3557061 - 3557095 + g 78 -14.2 -2.64155 | overlap 3557048 3557057 3557056 CCTCGGCACCGGGAT AGCCCAGCTGGCCG ATGGTTC CGGCCAGCAGGGCG TCAGTTTCCGGCGCA TERM 5609 3557359 - 3557312 - R 70 -9.9 -3.21416 | opp_overlap 3557321 CATTGCGAGGAGCAA CGCGACGAAGCAATCTCCTTC GCATAT GGACAAGATTGCTTCGCTGCG CTCGCAATGACACAG Dole_2963 3558689 - 3557580 - | hypothetical protein Dole_2964 3559357 - 3558686 - | cobalamin B12-binding domain-containing protein TERM 5610 3558785 - 3558830 + g 79 -7.5 -4.58395 | gap 1 CACGCCCAGCTTTTC CAC-CAGGCTCTGTTCCGTGGC TCC GCCGCCGAGCATGACCTGCGTG TTTTTGCGCAATCCC TERM 5611 3559441 - 3559420 - R 83 -11.5 -3.52073 | opp_overlap 3559417, overlap 3559421 CGTTCAATATTATAA TGGTGCGGC ACTG GCCGCACCC GAATTCGCTTTTCCT TERM 5612 3559440 - 3559421 - R 90 -15 -2.70923 | opp_overlap 3559417, overlap 3559420 GTTCAATATTATAAT GGTGCGGC ACTG GCCGCACC CGAATTCGCTTTTCC Dole_2965 3560088 - 3559414 - | TetR family transcriptional regulator Dole_2966 3561016 - 3560426 - | hypothetical protein Dole_2967 3561490 - 3561158 - | hypothetical protein TERM 5613 3561292 - 3561317 + g 74 -7.6 -4.11216 | gap 1, overlap 3561294 CCGCCTCCCGGTAGC CG-CAGGGGCA GAGAA TGTCCCTGTCG TTTTCCCGGTCCCCG Dole_2968 3561744 - 3561487 - | glutaredoxin Dole_2969 3562474 - 3561845 - | nitroreductase TERM 5614 3562010 - 3562021 + g 75 -3.6 -4.85782 | ACCGTCCATGGGATG GGTG TCCA CGCC TTTGTTTTTGGCGGC TERM 5615 3562247 - 3562268 + g 74 -6.5 -4.49756 | GGCCAGCACGATCAG GGTCACCGG GGCC TCGCTGACC TTTTCCTGTTTCCAC TERM 5616 3562455 - 3562434 - G 90 -4.4 -5.40072 | opp_overlap 3562447, overlap 3562436 3562438 TCCGGGTCAAAAAAA TTGACGGC CCGCCT GCCGTAAA CGACATCTTTAAAGT TERM 5617 3562471 - 3562489 + g 81 -3.8 -5.0538 | CGACATCTTTAAAGT CCATGACG CCT CCTTATGG TTTTTTGCGCTGCCC TERM 5618 3562694 - 3562715 + r 100 -15.9 -3.6682 | opp_overlap 3562694 CGATTCAATAAAAAA GGGAACCGG AGAA CCGGTTCCC TTTGAATGGGTAAAA TERM 5619 3562715 - 3562694 - R 100 -15.9 -5.4833 | opp_overlap 3562694 CGATTCAATAAAAAA GGGAACCGG AGAA CCGGTTCCC TTTGAATGGGTAAAA Dole_2970 3563072 - 3562749 - | hypothetical protein TERM 5620 3562908 - 3562931 + g 84 -2.3 -5.38321 | overlap 3562910 GGCATCATCAAAGGC CAGGTCGGG AAACCC CTTGACCAG TTTTTTCTGCTCTTT TERM 5621 3563121 - 3563108 - R 70 -9.5 -3.14989 | overlap 3563106 3563103 ATTGATAAAAGTATA GCCGG TGCA CCGGC TGCTCATAAACACGC Dole_2971 3563927 - 3563253 - | hypothetical protein TERM 5622 3564037 - 3564050 + H 75 -5.9 -4.56702 | TGATCTTTGCGCCCA CTGCC CCAT GGCGG TTTCTTTGCTTGACA TERM 5623 3564287 - 3564276 - g 75 -5.8 -4.59853 | GTAACCGGTGAAAAA CAGC TCAT GCTG GTGTCCGAGGAGTGG TERM 5624 3565328 - 3565316 - g 83 -5.5 -4.91109 | CGCCTATGAGAAAAA GCTGC CCG GCAAC CCCAACACCGCTTTT Dole_2972 3564153 - 3565496 + | peptidase M48 Ste24p TERM 5625 3565572 - 3565552 - T 90 -12.6 -3.72576 | overlap 3565530 3565531 3565561 3565565 TGGTTGCCCATCAAA GGGCGAAC ACAAG GTTCGCCC CTGCCGTACATCCGT TERM 5626 3565623 - 3565605 - T 100 -16 -3.06815 | opp_overlap 3565601 3565601 ATGTCCTGCAACACA GTCCCGCC GAT GGCGGGAC CAGGGTTACTCTCCC Dole_2973 3566755 - 3565658 - | ATPase TERM 5627 3567004 - 3566980 - R 73 -10 -3.31196 | overlap 3566983 GCAAATTCAGAGGAA TGAGGCGTAC TGAGC GTACGCCGCA GTGACGATGGATGCA TERM 5628 3567001 - 3566983 - R 71 -10.3 -2.82291 | overlap 3566980 AATTCAGAGGAATGA GGCGTAC TGAGC GTACGCC GCAGTGACGATGGAT Dole_2974 3567740 - 3567111 - | TetR family transcriptional regulator Dole_2975 3569311 - 3567740 - | carbohydrate kinase FGGY TERM 5629 3568831 - 3568841 + g 72 -4.6 -4.56597 | TCTGTTCGTATATCT CGGG AAA CTCG TTTTTCACCAGCAGC TERM 5630 3569081 - 3569063 - G 72 -6.6 -4.2558 | CACGGTGGAGGAAAA GGTGCTGG AAA CCGACACC GCGGCGATCTGCTTT TERM 5631 3569082 - 3569093 + g 81 -3.6 -5.11112 | CTGGAAACCGACACC GCGG CGAT CTGC TTTTTATTGACCTTT Dole_2976 3570813 - 3569566 - | saccharopine dehydrogenase TERM 5632 3569862 - 3569875 + g 72 -4.5 -4.59773 | gap 1, opp_overlap 3569851, overlap 3569861 3569862 GAAACCGCAGTTCCT GG-CGG CGG CCGTCC TTTTTGCCGGTCACC TERM 5633 3571260 - 3571233 - g 84 -2.7 -5.40072 | overlap 3571257 GTTTGCCGAAAAAAA CAAGCTGGTCT TAAATG AGATCAACCTG GAGCAGCACCTGTAC TERM 5634 3571357 - 3571371 + G 70 -4.2 -4.57341 | overlap 3571359 CGCCGCATCCACTCC CCGAAC GCG GTTCTG TTTTTGGACGAGATT TERM 5635 3571539 - 3571557 + G 75 -5.2 -4.65895 | overlap 3571539 3571541 ATATTACCATCTGGG TCCCCTGA CCT TCGGGGAA TTTTTAAATGCAACA Dole_2977 3571105 - 3572499 + | hypothetical protein Dole_2978 3573756 - 3572785 - | hypothetical protein TERM 5636 3573397 - 3573381 - G 83 -13.7 -3.57561 | CGTCAAGCTGGCAAA GCCGCTG GTC CAGCGGC GGAAGATTCGGCTCC TERM 5637 3573465 - 3573453 - G 100 -3.3 -6.02546 | opp_overlap 3573461 TGAAATTAAAAAAAA GATGG TAG CCCTC GCCGGCCAGGGTTTC TERM 5638 3573868 - 3573880 + H 93 -2.6 -6.02919 | AGGTGTTGTGAGGGC CTGC CGGAA GCGG TTTTTTTGTTTATGG TERM 5639 3573958 - 3573919 - H 86 -12.3 -3.55071 | TGACAGGGGTGCAAA GGGTATACACGGG-CAAGC TGAC GCTTGGCCCGTGC-CACCC GGTAAATATGATCCA TERM 5640 3574022 - 3573982 - H 70 -7.6 -3.8969 | TGATCCACACAATAA CGG-GTGCCACGGGCGAACC GAA GGTT-GCCCGTGAAAGGCCG AGGGTTGTATCGTGC TERM 5641 3574162 - 3574126 - H 83 -13 -3.00667 | opp_overlap 3574155 3574157, overlap 3574100 3574155 CAGAAACGAAGGAGA TTGCCACGTCGCTGCG CTCCT CGCAATGACGGGGCAA AAAGCCCGTTTGTAG TERM 5642 3574177 - 3574197 + H 73 -7.6 -4.08767 | gap 1, overlap 3574180 AAAAGCCCGTTTGTA GTG-TGCCC GTAA GGGCATCAC TTTTGCCCGGCTGCA TERM 5643 3574227 - 3574216 - H 71 -7.2 -4.07568 | TGCCCGGCTGCAAAA CGCC TGAC GGCG TCACTACAAACAAAA TERM 5644 3574605 - 3574578 - g 70 -12 -2.71712 | gap 1, opp_overlap 3574578, overlap 3574577 CTTTTCTTTGGAAAC GGTCAGCGCCGGC CGG GCCGGC-CTGACA TTGCTGCCCCTGGCC TERM 5645 3574578 - 3574605 + G 73 -12 -3.15544 | gap 1, opp_overlap 3574577 3574578 CTTTTCTTTGGAAAC GGTCAGCGCCGGC CGG GCCGGC-CTGACA TTGCTGCCCCTGGCC TERM 5646 3574660 - 3574682 + G 74 -6.9 -4.32579 | GGCCTGGCCCTGACC CTGGCCGGC ATGTG GCTGGGCAG TTTGTTCTCAAATAT Dole_2979 3574303 - 3574704 + | CrcB protein TERM 5647 3575408 - 3575373 - g 82 -6.1 -4.82901 | gap 2, overlap 3575374 CGTGGTGGACAAAAA GGGCCGTCCCGTGGGCG TGAT CACCCA-GGG-CGACCT GATCCGCAAAGGCGG Dole_2980 3574906 - 3576177 + | signal transduction protein TERM 5648 3576444 - 3576429 - f 74 -4 -5.00616 | opp_overlap 3576429 3576441 CCTCTCTGCAAAAAA CTAACC TATT AGTTAG TTTTTTTCTAAAAAT TERM 5649 3576429 - 3576444 + F 89 -3.3 -5.61596 | opp_overlap 3576429, overlap 3576441 CCTCTCTGCAAAAAA CTAAC CTATTA GTTAG TTTTTTTCTAAAAAT TERM 5650 3576441 - 3576463 + F 83 -5 -5.26875 | opp_overlap 3576429, overlap 3576429 AAACTAACCTATTAG TTAGTTTTTT TCT AAAAATCTAA TTTTTTACTTGACAC TERM 5651 3576614 - 3576590 - f 70 -10 -3.17714 | overlap 3576593 GCAAATCGCGAGGAA TGAGGCGTAC TGCGC GTACGCCGCA GTGACGAGTGATGCG TERM 5652 3576611 - 3576593 - f 71 -10.3 -2.78395 | overlap 3576590 AATCGCGAGGAATGA GGCGTAC TGCGC GTACGCC GCAGTGACGAGTGAT TERM 5653 3576941 - 3576927 - g 71 -7 -4.11484 | opp_overlap 3576928, overlap 3576928 CCGAACGGGTCAAAA CCCCGG GCA CCGGGT TTGTGCCGGCCCGGT TERM 5654 3576928 - 3576940 + G 77 -10.5 -3.85698 | opp_overlap 3576927 3576928 CGAACGGGTCAAAAC CCCGG GCA CCGGG TTTGTGCCGGCCCGG TERM 5655 3577321 - 3577288 - g 75 -9.6 -3.89695 | gap 1, opp_overlap 3577319 TCGTCACAAACAGAA CCCGGAGCGCCAGAT TTTTC ACCTGGC-CTACGGG CTGGGCCGCATCTTT TERM 5656 3577457 - 3577474 + G 84 -6.9 -4.77036 | ACCATGCACCGGGCC GGCCGCA AGTT TGCCGCC TTTTTCCTCATGCCC TERM 5657 3577703 - 3577686 - g 100 -4.8 -5.67967 | ACCATTACAAAAAAA CAGGCT ATGCCG AGCCCG ACTCGTCCCGCCGCA Dole_2981 3576677 - 3577840 + | helix-turn-helix domain-containing protein TERM 5658 3577887 - 3577865 - f 100 -10.6 -4.68705 | opp_overlap 3577884 ACAATTCGAATAAAA GCTGAAAGGG CAA CCTTTTCAGC CAGGGGGCTGTTTTG TERM 5659 3577884 - 3577897 + F 73 -8.1 -4.07568 | opp_overlap 3577865 AAAGGGCAACCTTTT CAGCC AGGG GGCTG TTTTGGAAGGGCGGG TERM 5660 3578192 - 3578180 - g 87 -7.7 -4.78753 | overlap 3578185 GGAAGACGAAGAAAA CAGCA CGG TGCTG GTGGGCGAAGGCGCA TERM 5661 3578221 - 3578211 - g 71 -6.8 -4.14392 | overlap 3578185 GGCGAAGGCGCAAAA CAGC TCC GCTG CGAAATGGACACCCT TERM 5662 3578478 - 3578458 - g 76 -12.5 -3.09096 | overlap 3578453 3578444 ACCAGAGAAACGACA CCCTGCGGG CCG CCCGCATGG ACAACCTTCACCTGG TERM 5663 3578582 - 3578598 + G 75 -3.6 -4.74103 | overlap 3578580 CCTGCCCCGCGAGGG CAAGGC CACCT GCCTGG TTTTTGACTTCGGCG TERM 5664 3578711 - 3578736 + G 77 -11.7 -3.62046 | overlap 3578712 CCGCTATCACCGCCT GGGCGGCGGCG ACAT CGACGCCGCCA TTGTTCACGAGGTGC TERM 5665 3578712 - 3578735 + G 83 -15.2 -2.77013 | overlap 3578711 CGCTATCACCGCCTG GGCGGCGGCG ACAT CGACGCCGCC ATTGTTCACGAGGTG TERM 5666 3579249 - 3579233 - g 75 -5.2 -4.57569 | CTATTTCGGCAAAAA CAAAAC AGGCG GTTTTG ACGACCCGGAACAGA TERM 5667 3580098 - 3580074 - g 74 -2.1 -4.9792 | gap 1, opp_overlap 3580092, overlap 3580076 3580077 3580079 CAGGCCATAGAAAAA GACGACGAGG ACCGTG CCCCGT-GCC TCGCCCTGAAAGCCA TERM 5668 3580268 - 3580248 - g 78 -9.7 -4.07568 | overlap 3580256 GCCCGCCTGGTAAAA GACGACAAG GCC CTTGCCGCC GCCGAAGCCGAACGC Dole_2982 3577947 - 3580385 + | heat shock protein 70 TERM 5669 3580428 - 3580441 + F 70 -8.1 -3.89614 | CTCCCGTTTGTAGTG TGCCC GTAA GGGCA TTTATAAAAATTGCC TERM 5670 3580957 - 3580967 + F 73 -4.6 -4.82667 | opp_overlap 3580942 3580939, overlap 3580943 CCCGGCCCCCTTGAC CGGG CCG CCTG TTTTTACTATGGTCA TERM 5671 3581678 - 3581662 - g 83 -5.1 -5.05712 | opp_overlap 3581667 3581669 AGAAACAATTAAAAA CAGTTTC CTG GCAACTG GCCGGTATTACTGTT TERM 5672 3583620 - 3583610 - g 70 -2.4 -4.74504 | ATGGGAATGGAAAAA GGCC CGA GGCA AAATAACCCAGGAGT Dole_2983 3581073 - 3583772 + | CRISPR-associated helicase Cas3 Dole_2984 3583769 - 3585358 + | CRISPR-associated Cse1 family protein TERM 5673 3585479 - 3585492 + G 85 -2.4 -5.50313 | GGCCGGAAGATGTTT TGCT GACCGA AGCA TTTTTTAATTTTCTA TERM 5674 3585665 - 3585640 - g 76 -4.8 -4.79053 | overlap 3585642 AAAGATGAAAAGAAA TCGAAAAAGA TGGCCT CCTTTTCCGA ACAATTGGCTACATC Dole_2985 3585355 - 3585933 + | CRISPR-associated Cse2 family protein TERM 5675 3586877 - 3586845 - g 86 -8.4 -4.56597 | opp_overlap 3586843 3586845 GTCCTTTCGGAAAAA GGCGACCAGCAG CCCCGCTCC CTGTCGGTCGCC TATTTAAAACCGATC Dole_2986 3585948 - 3587060 + | CRISPR-associated Cse4 family protein TERM 5676 3587229 - 3587248 + G 72 -8.6 -3.7948 | gap 1, opp_overlap 3587225 3587228 3587226, overlap 3587232 GAAACCGAAAACCAG CAGGCCCTG GAT CAGGGC-TG TTTAATCGCTGTTGA TERM 5677 3587232 - 3587246 + G 73 -11.4 -3.47762 | opp_overlap 3587225 3587228 3587226, overlap 3587229 ACCGAAAACCAGCAG GCCCTG GAT CAGGGC TGTTTAATCGCTGTT TERM 5678 3587613 - 3587648 + G 71 -11.3 -3.28791 | gap 1, opp_overlap 3587613 GCGTATGCACATCAA CCCCT-TTTGCCGG TTCATCATT CCGGCAAAGAGGGG TTGTCGAAGCGCGAT TERM 5679 3587648 - 3587613 - g 71 -11.3 -3.2794 | gap 1, opp_overlap 3587613 GCGTATGCACATCAA CCCCT-TTTGCCGG TTCATCATT CCGGCAAAGAGGGG TTGTCGAAGCGCGAT Dole_2987 3587070 - 3587849 + | CRISPR-associated Cas5 family protein TERM 5680 3588211 - 3588197 - g 81 -4.3 -5.16472 | AAAAACGGTAAAAAA CATGA TGTTG TCATG GATGCCCAGCAAACT Dole_2988 3587900 - 3588721 + | CRISPR-associated Cse3 family protein TERM 5681 3589371 - 3589355 - g 79 -13.7 -3.05596 | opp_overlap 3589342 3589364 TATGGCGTTACCGAA GCCGCCA TTC TGGCGGC CGGATACGCACCCGC TERM 5682 3589508 - 3589496 - g 95 -6.2 -5.52384 | GTGGCAGCAAAAAAA CCGG CTCAT CCGG ACCGAGAGGTGAGGA Dole_2989 3588767 - 3589696 + | CRISPR-associated Cas1 family protein Dole_2990 3589698 - 3590015 + | CRISPR-associated Cas2 family protein TERM 5683 3590120 - 3590096 - T 85 -2.8 -5.61881 | overlap 3590106 3590109 TTCTAAAAACAAAAA GTTCGAGGAA GTATG TTCCCCACAC GTGTGGGGATGAACC TERM 5684 3591871 - 3591908 + T 81 -6.1 -4.96996 | TATTCGGTGGCTTTT CGCAGGATGTTCCCCAC ACGT GTGGGGATGAACCGGTG TTTATTTTATTTAAA TERM 5685 3592023 - 3592000 - T 73 -5.2 -4.52857 | overlap 3592002 ACCTGTCAGAGAAAA TGTTCCCCAC ACGT GTGGGGATGA ACCGCATATCAGGTT TERM 5686 3592301 - 3592291 - T 73 -4.6 -4.80656 | ATGAAGAACAGAAAA CGGA ACC CCCG GAATGTTCCCCACAC TERM 5687 3592481 - 3592452 - T 76 -11.3 -3.14211 | opp_overlap 3592474, overlap 3592471 3592472 ACGCGTGGGGATGAA CCGGGCGACGGCC CGAA AACCGCCGCCCTG CAGTGATGTTCCCCA Dole_2991 3592875 - 3592702 - | hypothetical protein TERM 5688 3593551 - 3593522 - R 80 -12.1 -2.90496 | opp_overlap 3593522 3593523, overlap 3593519 GGGCTTCGGAAAGCA GGGACTCGAGGGC GGCG GCCCTTGAGTCCT CTTGTGACGCTGAAG TERM 5689 3593522 - 3593552 + r 93 -14.1 -3.31144 | gap 1, opp_overlap 3593522 3593519, overlap 3593523 GGGCTTCGGAAAGCA G-GGACTCGAGGGC GGCG GCCCTTGAGTCCTC TTGTGACGCTGAAGG TERM 5690 3593523 - 3593550 + r 100 -17.8 -3.22475 | opp_overlap 3593522 3593519, overlap 3593522 GGCTTCGGAAAGCAG GGACTCGAGGGC GGCG GCCCTTGAGTCC TCTTGTGACGCTGAA TERM 5691 3593665 - 3593698 + r 73 -4.5 -4.76963 | overlap 3593666 3593668 CTTGTCAAAACGTTT TTACCGGCACTCT GGCCTGAA GGAGAGCCGGTGG TTTTGTCTTGTGTCA TERM 5692 3593908 - 3593880 - R 73 -9.6 -3.34192 | gap 1, opp_overlap 3593904, overlap 3593881 3593883 AATGGCGGGAAGTAA TCACGGG-CAAGC TGGC GCTTGGCCCGTGG CACCCGTTTCTGGAA TERM 5693 3593907 - 3593881 - R 81 -13.1 -2.60194 | gap 1, opp_overlap 3593904, overlap 3593880 3593883 ATGGCGGGAAGTAAT CACGGG-CAAGC TGGC GCTTGGCCCGTG GCACCCGTTTCTGGA Dole_2992 3595043 - 3593880 - | diguanylate phosphodiesterase TERM 5694 3594255 - 3594284 + g 74 -2.7 -4.90013 | overlap 3594248 CAGGGCGGTGCGCAG GCGGGCAATTTCA GTGG TGTCGTTGGCCGC TTTTTCATTGAGTTC Dole_2993 3595450 - 3595172 - | putative transcriptional regulator Dole_2994 3596125 - 3595760 - | hypothetical protein Dole_2995 3597095 - 3596115 - | patatin Dole_2996 3597233 - 3597712 + | AsnC family transcriptional regulator TERM 5695 3598068 - 3598054 - g 81 -8.6 -4.30719 | TCCCGGCAGAAGAAA GTCGAT TTG ATCGAC AACATGAATGCTGAA Dole_2997 3597823 - 3598110 + | excinuclease ABC subunit C TERM 5696 3598276 - 3598265 - f 71 -7.2 -4.07568 | TGCCCGGCTGCAAAA CGCC TGAC GGCG TCACTACGAACAATT TERM 5697 3599420 - 3599409 - g 81 -3.6 -5.0916 | opp_overlap 3599410, overlap 3599410 3599413 GTCTGAACATAAAAA CCCA GGCC CGGG TCTACCTGACCGGCC Dole_2998 3598304 - 3599791 + | hypothetical protein TERM 5698 3600440 - 3600450 + G 77 -8.2 -4.28361 | CCCTGCTGACCACCC GGGG CTG CCCC TTTTCCTGCCCTTAC TERM 5699 3600830 - 3600848 + G 86 -12.4 -4.07568 | opp_overlap 3600841 3600843 TTGAGCACGCCGTGG CCTGCCTG AAA CAGGCGGG TTTTGACCGCCGGCA Dole_2999 3599788 - 3601143 + | radical SAM domain-containing protein TERM 5700 3601572 - 3601590 + F 83 -9.6 -4.18058 | overlap 3601546 CGGCAGCCGGCGGGG GTCCTTGT AAA ACAGGGAC TTTTCAAGTATGCTT TERM 5701 3601816 - 3601800 - g 70 -3.6 -4.70613 | AAAAGCTTAAGAAAA CGGCTC TACCT GATCCG GAACATGCAGGCGTT TERM 5702 3601877 - 3601905 + G 79 -13.9 -3.08211 | overlap 3601874 GTGCATGTTTATCCT TTTTACCGGCCAG TTG CTGGCCGGCAAGA TCATTTTCAGCGCCT Dole_3000 3601629 - 3602036 + | hypothetical protein TERM 5703 3602352 - 3602373 + G 95 -7.1 -5.41143 | CATTATGTTCGGCAT GGCCCCCAC CATC GAGGTGGCC TTTTTTTCCCGGGTC TERM 5704 3603141 - 3603157 + G 75 -4.3 -4.84529 | CATGGCGGGTACCTC GGTGGGC GCG GTCAACC TTTTTCCCTTTCTGG TERM 5705 3603291 - 3603312 + G 76 -4.4 -4.72272 | gap 1 GCTGCTGGCATCCGC GGTGGCGGC CCTGT GCTGC-ACC TTTTTCATGAAGGAG Dole_3001 3602056 - 3603354 + | major facilitator transporter TERM 5706 3603595 - 3603610 + G 90 -4.7 -5.3658 | overlap 3603574 GTGGTGGCCGGGGCC TGGCA CCGCAA TGCCA TTTTCTTTTTCTACT TERM 5707 3603690 - 3603673 - g 100 -14.1 -3.80841 | opp_overlap 3603686 ATCAGCAGCAGCAAA GGCGGCG ATAT CGCCGCC GGAATAGCCCGGCGG TERM 5708 3603686 - 3603705 + G 75 -12.1 -3.2375 | opp_overlap 3603673, overlap 3603699 AAGGCGGCGATATCG CCGCCGG AATAGC CCGGCGG TTCGGTTATGACGTG TERM 5709 3603870 - 3603888 + G 88 -5.8 -5.252 | GGGAATGCTGATACT GGCCAGGG ATG CCGGGGCC TTTTTTGTGCCCATG Dole_3002 3603430 - 3604155 + | hypothetical protein TERM 5710 3604617 - 3604630 + G 77 -2.3 -5.07567 | overlap 3604610 CGCGCCCAGAGCCTG GCCCT GTTC AAGGC TTTTTTCCAGTCTCC Dole_3003 3604200 - 3604706 + | CMP/dCMP deaminase zinc-binding TERM 5711 3604880 - 3604840 - T 100 -18.3 -3.38812 | opp_overlap 3604845, overlap 3604845 GCCCCTTCAACAACA TAAAAGCCGGGTCGTGGGA TAT TCCCGCGGCCCGGCTTTTT TTGTCGGTTTGAATG TERM 5712 3604875 - 3604845 - T 100 -18.2 -4.79752 | opp_overlap 3604845, overlap 3604840 TTCAACAACATAAAA GCCGGGTCGTGGGA TAT TCCCGCGGCCCGGC TTTTTTTGTCGGTTT TERM 5713 3604845 - 3604875 + T 100 -22.6 -5.68039 | opp_overlap 3604845 3604840 TTCAACAACATAAAA GCCGGGTCGTGGGA TAT TCCCGCGGCCCGGC TTTTTTTGTCGGTTT Dole_3004 3605553 - 3604906 - | cytochrome B561 Dole_3005 3607259 - 3605556 - | cytochrome c family protein TERM 5714 3605701 - 3605689 - G 77 -10.5 -3.91897 | opp_overlap 3605690 3605697 CCCGGCATGTAGAAA CCGGC AAG GCCGG CCATGCGGCTTTCCT TERM 5715 3606318 - 3606337 + g 71 -12.8 -2.62263 | overlap 3606281 GTCGTTGGGCTTGGT GCCGGCCT TGTG GGGCCGGC TGCTGTGGCACGACT TERM 5716 3606370 - 3606391 + g 77 -2.1 -5.10064 | overlap 3606371 CAGGTGATCTTGGTG GCCAGGTCG TCCT CGATCAGGG TTTTTCTGTCTTCAG Dole_3006 3609328 - 3607505 - | AMP-dependent synthetase and ligase TERM 5717 3607992 - 3608005 + g 75 -3.7 -4.81083 | overlap 3607982 CATCCGTCCTGCAAG GCCTC CTGT GTGGC TTTTTCATCCTTGAA TERM 5718 3608336 - 3608323 - G 72 -4.5 -4.63184 | opp_overlap 3608332 AACCGATGTTAAAAA GCACC TCCA GGTAC AGCGGCACCTTTTCG TERM 5719 3608980 - 3608969 - G 80 -2.2 -5.24129 | GTTCTCTACAAAAAA GAAG CGGG CCTC GGCATGGTTGATCAC Dole_3007 3610104 - 3609328 - | ABC transporter-related protein Dole_3008 3610938 - 3610111 - | ABC transporter-related protein TERM 5720 3610352 - 3610368 + g 76 -5.1 -4.73388 | TGAATGTCCTTGATC CAGAACA CCA TGTCCTG TTTTTCCTCGGCATT TERM 5721 3610852 - 3610887 + g 73 -12.6 -2.71712 | opp_overlap 3610849, overlap 3610851 GATGGCAAACACCTC ACCCTGGGCCACATCA AAGG TGATGTCGTCCAGGGC CTTTAAGCCGCCGAA TERM 5722 3610965 - 3611010 + r 100 -20.5 -4.20768 | gap 1, opp_overlap 3610972, overlap 3610969 3610970 3610972 CTGCCCGGTCTGTTT CGACAAACCATGGCCGCCCCTG AAG CCGGGGCGGCCATGGTG-GTTG TTGTTTATTCCGCCT TERM 5723 3610969 - 3611007 + r 100 -18.8 -4.21772 | opp_overlap 3610972, overlap 3610965 3610970 3610972 CCGGTCTGTTTCGAC AAACCATGGCCGCCCCTG AAG CCGGGGCGGCCATGGTGG TTGTTGTTTATTCCG TERM 5724 3610970 - 3611006 + r 100 -22.3 -3.11979 | opp_overlap 3610972, overlap 3610969 3610965 3610972 CGGTCTGTTTCGACA AACCATGGCCGCCCCTG AAG CCGGGGCGGCCATGGTG GTTGTTGTTTATTCC TERM 5725 3611004 - 3610972 - R 100 -24.9 -3.85698 | opp_overlap 3610972 3610970 3610969 3610965 GTCTGTTTCGACAAA CCATGGCCGCCCCTG AAG CCGGGGCGGCCATGG TGGTTGTTGTTTATT TERM 5726 3610972 - 3611004 + r 100 -24.9 -3.09866 | opp_overlap 3610972, overlap 3610970 3610969 3610965 GTCTGTTTCGACAAA CCATGGCCGCCCCTG AAG CCGGGGCGGCCATGG TGGTTGTTGTTTATT Dole_3009 3612262 - 3611015 - | extracellular ligand-binding receptor TERM 5727 3611588 - 3611599 + g 81 -3.6 -5.05782 | opp_overlap 3611581 3611579, overlap 3611584 AAACAGCAGCACCGC GTCG GCCC CGGC TTTTTTCAGCTCCAT Dole_3010 3613191 - 3612316 - | inner-membrane translocator Dole_3011 3614331 - 3613219 - | inner-membrane translocator TERM 5728 3613805 - 3613766 - G 91 -5.1 -5.54907 | overlap 3613767 3613800 GCCAGAAAATAAAAA TCCTGGTCGGTCTT-GAGC TCGC GCCCGAAAACC-ACCAGGT CCGGGGCGTTAAGCC TERM 5729 3613804 - 3613767 - G 72 -8.6 -3.91317 | overlap 3613766 3613800 CCAGAAAATAAAAAT CCTGGTCGGTCTT-GAGC TCGC GCCCGAAAACC-ACCAGG TCCGGGGCGTTAAGC Dole_3012 3615513 - 3614449 - | magnesium and cobalt transport protein CorA TERM 5730 3614975 - 3614963 - G 78 -4.1 -4.95547 | overlap 3614965 TCCAGAATAACAAAA TAGTG GTC CACCA CCGCGTCCAGCAACG Dole_3013 3618080 - 3615549 - | MscS mechanosensitive ion channel TERM 5731 3616931 - 3616952 + g 70 -3.7 -4.66264 | gap 1, opp_overlap 3616928, overlap 3616931 3616936 GGCGGACAAGACGCG CC-CTGGC CGGCAGA GCCAGCGG TTTTTCGCCCTTTTG TERM 5732 3617867 - 3617854 - G 71 -8.1 -4.07746 | opp_overlap 3617856 TCCGCAAAAACAGAA GCCGA CTGG TCGGC CTGACGCTTTTCCGC Dole_3014 3618644 - 3618117 - | protein of unknown function DUF395 YeeE/YedE TERM 5733 3618755 - 3618736 - R 76 -8.6 -4.03413 | gap 1 ACCCGCTGACAGAAA GCTGAAGCG ACC CGCT-CAGC CCGTGACCGCTCGGT Dole_3015 3619171 - 3618770 - | protein of unknown function DUF395, YeeE/YedE TERM 5734 3619327 - 3619314 - R 77 -4.5 -4.94972 | overlap 3619315 TATCATAATGAAAAA CGCTC AAAA GAGCA AAATGATAATTATTC Dole_3016 3620617 - 3619337 - | MscS mechanosensitive ion channel TERM 5735 3620338 - 3620315 - G 88 -5.2 -5.24129 | opp_overlap 3620318 3620322, overlap 3620318 TGCGTCGAGAAAAAA GATGGCCG CCGGGGCT CGGCCTTC CTGTTCGGCCCGGCG Dole_3017 3621579 - 3620794 - | split soret cytochrome c precursor TERM 5736 3621251 - 3621198 - G 73 -13 -2.78725 | overlap 3621195 ACAGCTCATCAACCA TGGGATCCCGATCGGCCCGGCCCC AGAAAA GGGCCCAGGCTGATACGGCTCCCA GCAGGGCGCCGCAGA Dole_3018 3622898 - 3621717 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 5737 3622785 - 3622775 - G 87 -6.8 -4.94487 | overlap 3622776 TGACAAAAGAGAAAA TCCG GTC CGGA GCGGCCAGGGAAAAA Dole_3019 3623424 - 3622879 - | 2-oxoglutarate synthase Dole_3020 3624230 - 3623421 - | thiamine pyrophosphate binding domain-containing protein Dole_3021 3625382 - 3624234 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 5738 3624483 - 3624495 + g 80 -10.5 -4.08216 | GCCGTAGCGCTCGCC CCGGC GCC GCCGG TTTTCAACCAGGTGA TERM 5739 3624750 - 3624793 + g 79 -12.5 -3.31322 | gap 2, overlap 3624791 CAGACGGCCGTCATC CCG-GGGCAGGTAGGG-GTGG TAGT CCACGCCCTGCTTGACCGCGG TTCTCAGCCGTTCGG TERM 5740 3624807 - 3624843 + g 78 -8.5 -4.10657 | GGTTCTCAGCCGTTC GGTGACCTCAATGGCGC CGG GCGCCGGAATGGTCACC TTTTCCCGGGTATGG Dole_3022 3625596 - 3625375 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Dole_3023 3626757 - 3625597 - | radical SAM domain-containing protein TERM 5741 3626837 - 3626817 - H 85 -11.8 -3.71649 | overlap 3626818 GGCGCAAATCCCAAA CCGGCGCC GATGA GGCGCCGA CAGCCGACAGCCATC TERM 5742 3626836 - 3626818 - H 81 -13.1 -2.82668 | overlap 3626817 GCGCAAATCCCAAAC CGGCGCC GATGA GGCGCCG ACAGCCGACAGCCAT TERM 5743 3628489 - 3628515 + G 74 -10.9 -3.53224 | gap 1 TTGCGGTGGGCGACG CCGCAGCGGTCC CCGT GGACC-TTGCGG TTTCCAGAGACCATG TERM 5744 3628823 - 3628795 - g 100 -10.2 -5.09426 | opp_overlap 3628795 3628794 TTGAATGGGAAAAAA CCGGCAGCCGCC TGGTG GAGGGCTACCGG ATTTACCGGATGGAA TERM 5745 3630547 - 3630516 - g 95 -10 -4.72986 | overlap 3630535 CAGGCTTACGAAAAA GCGGCGGACGCC TATACCAG GGCGGCGGCCGC GGACCCCGAAGACCC Dole_3024 3627018 - 3630710 + | TPR repeat-containing protein Dole_3025 3630727 - 3631200 + | hypothetical protein Dole_3026 3633173 - 3631248 - | hypothetical protein TERM 5746 3631430 - 3631442 + g 88 -5.5 -5.24531 | opp_overlap 3631430 GGGCCGCAAAAGACA GAGGG TCA CTCTC TTTTTTGTCCGCGAT TERM 5747 3631646 - 3631659 + g 81 -3.7 -5.09173 | opp_overlap 3631629 3631627, overlap 3631640 CCACCCGAAGGGCCG CCAGG CGAT CCCGG TTTTTTCCCATGTTC TERM 5748 3632405 - 3632373 - G 100 -9.1 -5.62219 | overlap 3632374 AAGATAGGAAAAAAA CCACTGCTGCAGCTT GTA AAGCAGCAGCGATGA AGCAGCCCCGGAACG TERM 5749 3632404 - 3632374 - G 80 -10.4 -3.94891 | overlap 3632373 AGATAGGAAAAAAAC CACTGCTGCAGCTT GTA AAGCAGCAGCGATG AAGCAGCCCCGGAAC Dole_3027 3634121 - 3633315 - | beta-lactamase domain-containing protein TERM 5750 3633407 - 3633420 + g 77 -8.1 -4.26327 | overlap 3633389 CCACCGTGGCAAGGG CACGC TCCG GCGTG TTATTTTCGTGGCTC TERM 5751 3634024 - 3633992 - G 74 -11.1 -3.57561 | TTTCAACGCCTGAAA GCCCGGCGTCCACCA GAA TGGCGGTGTCCGGGC CGGAGATAAAAACAG TERM 5752 3634047 - 3634037 - G 80 -4.6 -4.96848 | overlap 3634040 GGCCGGAGATAAAAA CAGC GTT GCCG CGGCTGCCGCTGGCC Dole_3028 3634651 - 3634178 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Dole_3029 3636832 - 3634667 - | polynucleotide phosphorylase/polyadenylase TERM 5753 3635531 - 3635509 - G 72 -8.4 -3.79747 | opp_overlap 3635509 GGATGCAGGAGCAAA CGGTTCCCAT GGA AGAGGAACCG TTGGATTCGAGCACT TERM 5754 3635995 - 3636005 + g 71 -6.8 -4.19704 | AGGCCTCGCCAAGGC CCTG GAA CAGG TTTTCCCTCACCTTG TERM 5755 3636885 - 3636850 - R 100 -9.7 -5.40072 | opp_overlap 3636851, overlap 3636880 TTTCTCCTAAAAAAA GGCGGCTTTCTGCGT TGTTCC ATACAGCAAGCCGCC ACGGACCGACCTACC Dole_3030 3637216 - 3636947 - | ribosomal protein S15 Dole_3031 3638242 - 3637331 - | tRNA pseudouridine synthase B TERM 5756 3637795 - 3637807 + g 90 -10.5 -4.59773 | opp_overlap 3637792 ACGACGAAATCACCA CCGGC CGA GCCGG TTTTTCAACATAAAC Dole_3032 3639216 - 3638239 - | phosphoesterase domain-containing protein Dole_3033 3639568 - 3639179 - | ribosome-binding factor A Dole_3034 3639879 - 3639565 - | hypothetical protein Dole_3035 3642546 - 3639892 - | translation initiation factor IF-2 TERM 5757 3640068 - 3640097 + g 72 -5 -4.65895 | gap 2, opp_overlap 3640059, overlap 3640072 3640074 CAATCACGCCGTCCC TCAGCAGCCGGGCC GGCC GGCCCCGCT-C-GA TTTTTCCGTCCAGCA TERM 5758 3640495 - 3640509 + g 79 -5.7 -4.76644 | CTTTATGATGATATT GAGGA CCTTC TCCTC TTTTTCCTGCATCTT TERM 5759 3641871 - 3641924 + g 86 -16 -2.78715 | AGGGTTTTTTGTCTT TTTCTCCGGCCGG-AGTCGCCGCGGC CGGC GCCGCGG-GACTGTCGGCCGGGGCCG TATCATCGACCACTT Dole_3036 3644001 - 3642574 - | transcription elongation factor NusA Dole_3037 3644543 - 3643998 - | hypothetical protein TERM 5760 3644580 - 3644593 + r 74 -9.5 -3.53012 | opp_overlap 3644580 TAGTCAAATAAAAAA CGGGC GTTT GCCCG TTTCCACCCAACCCA TERM 5761 3644593 - 3644580 - R 100 -9.5 -5.65927 | opp_overlap 3644580 TAGTCAAATAAAAAA CGGGC GTTT GCCCG TTTCCACCCAACCCA Dole_3038 3645204 - 3644827 - | MerR family transcriptional regulator Dole_3039 3647655 - 3645244 - | phenylalanyl-tRNA synthetase, beta subunit TERM 5762 3645439 - 3645455 + g 71 -7.9 -4.08767 | TTCTATCAGGGACTG GCCCTGC ATG GCAAGGC TTTTCAACAGGTCGG TERM 5763 3645613 - 3645603 - G 85 -2.4 -5.61881 | TTTCAAAAACAAAAA CCGG CTG CCTG ACGCCAAAGGACTCC TERM 5764 3645995 - 3645960 - G 75 -5.4 -4.56597 | gap 1, overlap 3645985 TTTCCTGCTGAAAAA TGTTGTCCCGGGTGTTT TTC AAAAGCCCGGG-CACCA GAGAGGTCCGCATCA TERM 5765 3646455 - 3646491 + g 75 -8.8 -4.07568 | gap 2, overlap 3646447 3646451 TCCGTTTTTCGCCGG CCGGCC-GCGGA-TGGTT GTC AATCACTCCCCTGGCCGG TTTTCCACCGGCCAC Dole_3040 3648660 - 3647656 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 5766 3648118 - 3648128 + g 91 -8.2 -5.08824 | overlap 3648097 3648096 CGCGATGATGCGCAG CGGC GGG GCCG TTTTTTCCATGACCC Dole_3041 3649143 - 3648793 - | ribosomal protein L20 Dole_3042 3649392 - 3649195 - | ribosomal protein L35 TERM 5767 3649354 - 3649372 + g 74 -6.6 -4.45693 | TTTTGTCCGCTTGAA CCGCTTGG CAG CCGAACGG TTTGTCTTTATCTTC Dole_3043 3649888 - 3649469 - | initiation factor 3 TERM 5768 3650095 - 3650105 + H 77 -2.6 -5.35459 | ACACCTGTGTTTCTA TTTT TTC AAAA TTTTTTATACTATAT TERM 5769 3650238 - 3650250 + H 71 -9.1 -3.5268 | overlap 3650234 CGCTTTTTGCCGCCG GCCCT CAC AGGGC TTGAATTTTGTTTTT TERM 5770 3651072 - 3651086 + G 74 -7.8 -4.15044 | overlap 3651068 GGCGTGGGTGCCTCC CGGGTC CGG GACCTG TTTCTTCAGGGCAAA TERM 5771 3652225 - 3652211 - g 74 -7 -4.2558 | CATGCCGGAGGAAAA GCCGGC GAA GCCGTC CGAACCGGCGGAGAA Dole_3044 3650358 - 3652298 + | ATP-dependent metalloprotease FtsH Dole_3045 3652304 - 3653179 + | dihydropteroate synthase Dole_3046 3653191 - 3653958 + | Baf family transcriptional activator TERM 5772 3654098 - 3654140 + T 83 -9.1 -4.46112 | gap 1, opp_overlap 3654082 3654092, overlap 3654103 3654105 3654105 3654137 ACCGACAGACCTCTT GCCCTTCG-GGCACGGGCAA CAAG TTGCCCGTGTCACTATTGGC TTTATTTGCATAGCC TERM 5773 3654105 - 3654132 + T 78 -12 -2.5502 | opp_overlap 3654082 3654092, overlap 3654103 3654098 3654105 GACCTCTTGCCCTTC GGGCACGGGCAA CAAG TTGCCCGTGTCA CTATTGGCTTTATTT TERM 5774 3654105 - 3654133 + T 79 -11.8 -3.26841 | gap 1, opp_overlap 3654082 3654092, overlap 3654105 3654103 3654098 GACCTCTTGCCCTTC G-GGCACGGGCAA CAAG TTGCCCGTGTCAC TATTGGCTTTATTTG Dole_3047 3655114 - 3654236 - | hypothetical protein TERM 5775 3655372 - 3655339 - R 73 -10.3 -3.14944 | gap 1, opp_overlap 3655338 3655370, overlap 3655334 3655347 TATCATGATACCCAA CGGCGAAAGCCAATGG CAG CCAG-GGCTTCCACCG ACTTTGATTAAAGTT TERM 5776 3655370 - 3655389 + r 71 -7.2 -3.98981 | opp_overlap 3655339 3655347, overlap 3655338 3655388 CAGCCAGGGCTTCCA CCGACTTT GATT AAAGTTGG TTGTTGTTCAATCTT TERM 5777 3655930 - 3655949 + r 76 -7.2 -4.43309 | opp_overlap 3655937 ATCGCCCCCCGAGTG TATCGAAC CGAC GTTCGGTA TTTTGGTTAAAATTA TERM 5778 3656034 - 3656091 + r 87 -12.8 -3.38991 | gap 3, overlap 3656039 TTATGCATAACGGTG CGCCTGG-C-CG-GCGCTGGAAGGGCGCC GTC GTCGGCCTTTCAGCGTACGTGTCCAGGTG TCTTGTTGGCCCACT TERM 5779 3656039 - 3656069 + r 74 -9.6 -3.57971 | overlap 3656034 CATAACGGTGCGCCT GGCCGGCGCTGG AAGGGCG CCGTCGTCGGCC TTTCAGCGTACGTGT Dole_3048 3656584 - 3656105 - | hypothetical protein TERM 5780 3656691 - 3656648 - H 100 -19.8 -4.22041 | opp_overlap 3656643 3656644 AAATGTCAACAGAAA GTTTGCTATCACTTCTGCGT CATG ACGCAGAAGTGATAGCAGCC ATGGGCTTTCTTCGT TERM 5781 3656803 - 3656813 + H 76 -8.2 -4.05446 | overlap 3656794 GGGTGCGGCGCTCCC GGGG ATC CCCC TTTGTCATTACCGGG TERM 5782 3657444 - 3657456 + G 86 -4.7 -5.18371 | opp_overlap 3657444 TTCGTCCCGGGAAAT CCGGC CCT GGCGG TTTTATTTTGTCCAG TERM 5783 3657560 - 3657533 - g 75 -5.5 -4.58283 | CAAGCTTTTTAAAAA CCGCCCACC TGGGTATTGT GGTGTGCGG GGAGCCGGACCAATC TERM 5784 3657800 - 3657786 - g 73 -3.5 -4.77165 | gap 1, overlap 3657787 3657788 TCCGGCAGAAGAAAA GCCCGG GGTG CCGG-C GAACAGCCTGCCGGT Dole_3049 3657325 - 3657837 + | nitroreductase TERM 5785 3657929 - 3657884 - T 82 -11.4 -3.37344 | gap 1 GTGGTATGGAATCAA TTTTATTCTG-GATTGCCCGG TCAAG CCGGGCAATGACGGAATAAAA AGGCCGTCGATGACG TERM 5786 3658040 - 3658062 + T 80 -8.4 -4.43571 | overlap 3658043 CCGCCCGTTGCAGCG CAGTCACGCC TGC GGCGTGATTC TTTTGGTACTTTTCT TERM 5787 3658043 - 3658059 + T 95 -12.3 -4.29953 | overlap 3658040 CCCGTTGCAGCGCAG TCACGCC TGC GGCGTGA TTCTTTTGGTACTTT Dole_3050 3658261 - 3658097 - | hypothetical protein TERM 5788 3658138 - 3658150 + g 70 -2.6 -4.81249 | overlap 3658136 GCGCGTCGATTTCCT GCTG AATGG CGGC TTTTTCGGTTTCCGG Dole_3051 3658932 - 3658258 - | response regulator receiver protein Dole_3052 3660107 - 3658944 - | twitching motility protein TERM 5789 3659286 - 3659238 - G 78 -11 -3.69621 | ACCCAGAATCTCAAA GGC-TGCCACCCGGCCCCCGCCCA CCT TGGGCAGCAGCCGC-TGGCACACC ACCCACCGCAGGGTC Dole_3053 3661210 - 3660128 - | twitching motility protein TERM 5790 3660925 - 3660938 + g 78 -9.5 -4.0641 | opp_overlap 3660925 GAATCTCCCGGAACA CGGCG CCCA CGCCG TTTCTCTGCATGAAA Dole_3054 3661583 - 3661284 - | protein of unknown function YGGT TERM 5791 3661603 - 3661622 + r 83 -4.2 -5.40072 | TCCGCCGTTTTCAAT CAAATGCG ATGC CGCGGTTG TTTTTTTACCAGCCA Dole_3055 3662076 - 3661738 - | hypothetical protein TERM 5792 3662137 - 3662122 - R 91 -11.8 -4.07568 | TTGGTTTTTTCAAAA CCCCGG TTTA CCGGGG ATTACAATCAATACG Dole_3056 3662472 - 3662194 - | hypothetical protein TERM 5793 3662442 - 3662458 + g 76 -2.9 -5.01732 | CCATGTCCATTGGCG CCTCCAT GGC ATAGGGG TTTTTTGGAAGCATT Dole_3057 3662967 - 3662545 - | hypothetical protein Dole_3058 3664659 - 3663070 - | radical SAM domain-containing protein TERM 5794 3664194 - 3664214 + g 74 -6.1 -4.45083 | CGGCATATTCCCGCA CCGGCGT GGAACAA ATGCCGG TTTTATCCCTGTAGA TERM 5795 3664834 - 3664866 + r 100 -17.7 -3.64703 | opp_overlap 3664837, overlap 3664837 TCTCTGGCGCGAAAA AAAGCAGGGTCCGGG AAA CCCGGACCCTGCTGG TTTGCATCGGAAGGG TERM 5796 3664837 - 3664863 + r 100 -23.8 -2.94144 | opp_overlap 3664837, overlap 3664834 CTGGCGCGAAAAAAA GCAGGGTCCGGG AAA CCCGGACCCTGC TGGTTTGCATCGGAA TERM 5797 3664863 - 3664837 - R 100 -23.8 -5.40072 | opp_overlap 3664837 3664834 CTGGCGCGAAAAAAA GCAGGGTCCGGG AAA CCCGGACCCTGC TGGTTTGCATCGGAA Dole_3059 3666654 - 3664891 - | formate--tetrahydrofolate ligase TERM 5798 3665366 - 3665382 + g 80 -9.3 -4.16842 | overlap 3665367 TCGGCGCAGCGGGCG CCGGCCG CCT CGGCCGC TTTCTTAACGATAGC TERM 5799 3665367 - 3665381 + g 76 -12.8 -3.09784 | overlap 3665366 CGGCGCAGCGGGCGC CGGCCG CCT CGGCCG CTTTCTTAACGATAG TERM 5800 3667100 - 3667111 + H 71 -3 -4.85267 | GCCTGGCCACCTTCT GAAA CTCT TTTC TTTTTCATCGTTTAT TERM 5801 3667358 - 3667378 + G 87 -12.5 -3.90744 | overlap 3667359 CGGCCCGGTCAACCG TGGCCGGCC TGC GGCAGGCCA TTCTTTCGGCAAAAA TERM 5802 3667420 - 3667475 + G 74 -11.6 -3.5393 | overlap 3667421 GAAACCGAGCTGGCC ATCGACGCCGTTGTGATGCGGGCCGC TCAG GCGGCCCGGACCGCCATGGCGCCCAA TTTAAAACCGGTGAT TERM 5803 3667421 - 3667474 + G 83 -15.1 -2.72144 | overlap 3667420 AAACCGAGCTGGCCA TCGACGCCGTTGTGATGCGGGCCGC TCAG GCGGCCCGGACCGCCATGGCGCCCA ATTTAAAACCGGTGA TERM 5804 3668417 - 3668439 + G 71 -6.8 -4.20918 | opp_overlap 3668418, overlap 3668418 TACCCCTGGTGTCAA AGGCCGGGGG CGG CTCCCTGCCG TTTCTTGAAATTCCC Dole_3060 3667198 - 3668673 + | L-seryl-tRNA(Sec) selenium transferase TERM 5805 3669205 - 3669181 - g 82 -10.7 -4.25104 | gap 1 GCCTGGTGACCAAAA GCGC-GGCCG GCAGCT CGGCCTGCGC GGGATGCACCTCTTC Dole_3061 3669012 - 3669242 + | FmdB family regulatory protein TERM 5806 3669281 - 3669240 - f 71 -9.3 -3.60792 | gap 1, overlap 3669243 TGCGCAAGCTGCAAA TGATCATGCCGCCGGCCGGG ACG CCCGGCCGGCCG-AGAACCT GGGGCAACCGGTTGC TERM 5807 3669277 - 3669243 - f 83 -12.9 -2.92667 | gap 2, overlap 3669240 GCAAGCTGCAAATGA TCATGCCGCCGGCCGGG ACG CCCGGCCGGCCG-A-GA ACCTGGGGCAACCGG Dole_3062 3669403 - 3670941 + | uroporphyrin-III C-methyltransferase TERM 5808 3671723 - 3671677 - g 90 -10.7 -4.57073 | overlap 3671701 CACTTCCTGCAAAAA CCCCACCCCCATTCTGGCC ATCAAGTCG GGCCGGACCGGGGCCGGGG CCGCGGCCGCCTCCT TERM 5809 3671878 - 3671864 - g 78 -2.8 -5.14563 | TTTGCCACCAAAAAA TTTCCC ATG GGCAAA CGCATCGCCATTGTC Dole_3063 3670964 - 3673099 + | CoA-binding domain-containing protein TERM 5810 3673586 - 3673596 + G 100 -5.4 -6.06723 | ACGGGGCCAACCTGT CTGT CGA ACAG TTTTTTTTTGACCAC Dole_3064 3673096 - 3673704 + | 4'-phosphopantetheinyl transferase TERM 5811 3673872 - 3673890 + F 72 -10.2 -3.06815 | GGGCGAGTCGCCTTG ATCCCGCC ATC GGCGGGAC TGTGTTGCGGGACAT TERM 5812 3674312 - 3674300 - g 75 -9.1 -4.07568 | opp_overlap 3674311 CCTCGGGTTTCAAAA CCCTC AAC GAGGG TGACCGCGTCACGTT Dole_3065 3674182 - 3674382 + | cold-shock DNA-binding domain-containing protein TERM 5813 3674440 - 3674407 - f 100 -13.8 -4.12902 | opp_overlap 3674407 GAAGCACTTTTAAAA GGCACCTTCCGACG TCATTG CGACGGGAGGTGCC TTTTTTTATTTTCAT TERM 5814 3674407 - 3674440 + F 100 -16.7 -6.11229 | opp_overlap 3674407 GAAGCACTTTTAAAA GGCACCTTCCGACGT CATT GCGACGGGAGGTGCC TTTTTTTATTTTCAT TERM 5815 3675277 - 3675290 + G 83 -5.2 -4.9725 | opp_overlap 3675261, overlap 3675267 TGCGGCCCGGCTCTC CCCC AGGCCC GGGG TTTTTCTCTGCGCCT TERM 5816 3675572 - 3675592 + G 88 -11.1 -4.21908 | AGCTGGATCGGTATT GATGACGCC ATC GGCGCCATC TTTTACCTGCTGATG Dole_3066 3674489 - 3675877 + | hypothetical protein TERM 5817 3676178 - 3676190 + G 74 -6.2 -4.4874 | overlap 3676167 GATCGTGGAAAGCGT GCGC GTTCA GCGC TTTTCCCTTTTTCCC Dole_3067 3675879 - 3676985 + | hypothetical protein TERM 5818 3677022 - 3676991 - T 100 -18.8 -5.88565 | CGGACAATAAAAAAA CCGGCCCGCGAT TGAGCGAG ATCGCGGGCCGG CCAAAACAGAAGGTA TERM 5819 3677194 - 3677168 - T 73 -3.2 -5.00616 | opp_overlap 3677172, overlap 3677172 3677182 CCTCTTTTTAAAAAA TATATTTAATTC AAT AAATTAAATTTA AAACCATCGGCATTC TERM 5820 3677334 - 3677347 + T 70 -2.3 -4.90217 | overlap 3677335 TTTCAGGCGGCTGAA GGGGA ATAT TCCAC TTTTTCATCTGTTTC Dole_3068 3678726 - 3677314 - | PAS modulated sigma54 specific transcriptional regulator TERM 5821 3678439 - 3678454 + g 75 -10.4 -3.7398 | overlap 3678437 ATGGCGGCCGTCTTT GTGCCG CAGC CGGCAC TCTTTTGAGTTGACC TERM 5822 3678600 - 3678628 + g 93 -8.9 -4.82901 | CGCTGATTTTTTCCA TGGCCGGATTC CACGAAA GAATGCGGCCA TTTTTATCCAAAGCA Dole_3069 3679142 - 3679456 + | hypothetical protein TERM 5823 3679464 - 3679490 + F 100 -17.3 -4.1466 | opp_overlap 3679457 GCAACTGACCGGACA CTCGGGCCGGT CAACC ACCGGCCCGGG TTTTGACAATTCAAT Dole_3070 3679527 - 3679844 + | thioredoxin Dole_3071 3680095 - 3681300 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 5824 3681346 - 3681315 - f 81 -12.9 -2.808 | overlap 3681312 AAACCAACCGAACCA GCGTCACCCGGCC TTTTCC GGCCGGGTGCCGA CACATAAAGGAAGCT TERM 5825 3681432 - 3681448 + G 83 -7.9 -4.56597 | opp_overlap 3681430 3681431 GCCTGGAGTTAAACG CCCTGCG GGA CGAAGGG TTTTTAAACACCGAC Dole_3072 3681365 - 3682015 + | hypothetical protein TERM 5826 3682638 - 3682594 - g 78 -6.2 -4.56597 | gap 1, opp_overlap 3682617 TGTGTTTGCCAAAAA CGGGTGGCGCCTGGTGTGGGG CAGG CCCCGGTCCATG-GACACCCG GGGCCTGGTCTACGG TERM 5827 3682738 - 3682726 - g 71 -10.5 -3.56092 | opp_overlap 3682736 GGAGCACTTTTTAAA CCCGG TTT CCGGG GACCAGGTGATGGAC Dole_3073 3682061 - 3683176 + | (Uracil-5)-methyltransferase TERM 5828 3683248 - 3683216 - T 100 -15.8 -4.18018 | opp_overlap 3683221, overlap 3683221 TTGCTGCACCCAAAA TAAAAGGCCACTGC TTTTC GCAATGGCCTTTTA AACCCTCTGTTTTTA TERM 5829 3683243 - 3683221 - T 100 -11.3 -5.10933 | opp_overlap 3683221, overlap 3683216 GCACCCAAAATAAAA GGCCACTGC TTTTC GCAATGGCC TTTTAAACCCTCTGT TERM 5830 3683221 - 3683243 + T 78 -9.1 -4.10925 | opp_overlap 3683221 3683216 GCACCCAAAATAAAA GGCCACTGC TTTTC GCAATGGCC TTTTAAACCCTCTGT Dole_3074 3684670 - 3683276 - | TRAP dicarboxylate transporter- DctP subunit TERM 5831 3684018 - 3684007 - G 74 -2.2 -4.91109 | overlap 3683989 CGGGCACCAGAAAAA CAGA GGTT TCCG GGGAAGCGGCCAGCA TERM 5832 3684725 - 3684695 - R 75 -3.2 -5.04249 | overlap 3684697 3684715 TCCTTAAAAAATAAA TACGCCGGGTCTTT ATA AAAGATCCATCGGA TCAATCAAATTCTTT TERM 5833 3684727 - 3684715 - R 78 -7.7 -4.36914 | overlap 3684697 3684695 CGGGTCTTTATAAAA GATCC ATC GGATC AATCAAATTCTTTTT Dole_3075 3686017 - 3684707 - | TRAP dicarboxylate transporter, DctM subunit Dole_3076 3686549 - 3686043 - | tripartite ATP-independent periplasmic transporter DctQ TERM 5834 3686384 - 3686344 - G 100 -24.1 -4.07568 | opp_overlap 3686336 3686367 TGGCTTCTTTCAAAA CTGGAGGTGGCGATGCTGG CGC CCAGCATCGCCAGCACCAG CAGGGCCATGTTGTT Dole_3077 3687425 - 3686568 - | hypothetical protein TERM 5835 3686987 - 3687001 + g 76 -2.8 -4.96848 | overlap 3686990 TCCACAAAAGGGCCG GCACAA ACT TTTTGC TTTTTATCTCCCGGA Dole_3078 3689110 - 3687713 - | TRAP dicarboxylate transporter- DctP subunit TERM 5836 3688012 - 3687992 - G 74 -11.2 -3.54129 | opp_overlap 3687994 GATATTGTCGGCAAA CAGTTCGG ACATG CCGAACTG CTTGCGGAACCGGTC TERM 5837 3689200 - 3689184 - H 100 -15.1 -4.5394 | ACATAAACATCAAAA CCGGCGG CTG CCGCCGG ATGATCAATGACAGG TERM 5838 3689518 - 3689532 + H 83 -8.5 -4.61482 | opp_overlap 3689517, overlap 3689524 GAGGACCAGAACCAT GGCGC AGAAG GCGCC TTCTTTTTTGCGCGA TERM 5839 3689524 - 3689535 + H 77 -4.4 -5.00884 | opp_overlap 3689517, overlap 3689518 CAGAACCATGGCGCA GAAG GCGC CTTC TTTTTTGCGCGAGGT TERM 5840 3689822 - 3689812 - g 79 -5.4 -4.72272 | overlap 3689813 CCTGTGGATGAAAAA TGTG CTG CACA CCGAAACCATCAAGG TERM 5841 3689913 - 3689927 + G 75 -4.2 -4.72272 | opp_overlap 3689899, overlap 3689912 3689911 ACCGGGACGGTGTTG CCGC GGCACGG GCGG TTTTTGATCCGGCCG TERM 5842 3690449 - 3690426 - g 80 -4.4 -5.00616 | overlap 3690427 CCTTTGCCGAAAAAA TCGCCCGGTC TTCT GACCAGTCGG TGCTGGCGCATCTGG Dole_3079 3689555 - 3690595 + | lipid-binding START domain-containing protein Dole_3080 3691342 - 3690602 - | hypothetical protein Dole_3081 3691968 - 3691435 - | UspA domain-containing protein Dole_3082 3692587 - 3692099 - | hypothetical protein Dole_3083 3693496 - 3692618 - | alpha/beta hydrolase fold TERM 5843 3694342 - 3694331 - g 70 -3.6 -4.58466 | overlap 3694326 TGGATAAGGACAAAA CGAG CAAA CCCG TTTTAGAGGCATTTA Dole_3084 3693703 - 3694596 + | hypothetical protein TERM 5844 3694670 - 3694706 + T 100 -20.9 -3.63627 | opp_overlap 3694667 3694666 CGAGAGGACAACCGC GCACCACCCCGGCTTTT TTA AGGAGCCGGGGTGGCGC TTTACCATCTGCCGG Dole_3085 3695848 - 3694910 - | hypothetical protein Dole_3086 3699225 - 3695854 - | hypothetical protein TERM 5845 3697229 - 3697241 + g 74 -7.7 -4.17002 | AATTCAACTTCATAT TTGGC GCC GCCAA TTCTTTGCTTTACTA TERM 5846 3697710 - 3697731 + g 77 -2.3 -5.08824 | opp_overlap 3697711 3697714, overlap 3697711 3697714 GAAAACGATCTGAAA ATAACTGTG GATT TACAGTTAG TTTTTTGGCTAAGGC TERM 5847 3698515 - 3698491 - G 70 -2.7 -4.76892 | AGACGAATTCAAAAA CCATTGGGCGA GGC TCTCCGGATGG CATTGTAGCTTACCG TERM 5848 3699583 - 3699533 - R 80 -8.59999 -4.44974 | gap 3, opp_overlap 3699535 3699537 3699538, overlap 3699536 3699537 3699538 GGAAACCTGAGAAAA GAACC--CGTCATCAGGTGGTGCCT GATC AGGCACCACCTGAT-ACGTCAGTTT ACGGACGATATTCAG TERM 5849 3699535 - 3699579 + r 72 -10.8 -2.72263 | gap 1, opp_overlap 3699533 3699536 3699537 3699538, overlap 3699537 3699538 AAACCTGAGAAAAGA ACCCGTCATCAGGTGGTGCCT GATC AGGCACCACCTGAT-ACGTCA GTTTACGGACGATAT TERM 5850 3699578 - 3699536 - R 100 -14.3 -4.32669 | gap 1, opp_overlap 3699535 3699537 3699538, overlap 3699533 3699537 3699538 AACCTGAGAAAAGAA CCCGTCATCAGGTGGTGCCT GATC AGGCACCACCTGAT-ACGTC AGTTTACGGACGATA TERM 5851 3699577 - 3699537 - R 100 -17.8 -3.18517 | gap 1, opp_overlap 3699535 3699537 3699538, overlap 3699536 3699533 3699538 ACCTGAGAAAAGAAC CCGTCATCAGGTGGTGCCT GATC AGGCACCACCTGAT-ACGT CAGTTTACGGACGAT TERM 5852 3699537 - 3699580 + r 74 -9.7 -3.54307 | gap 2, opp_overlap 3699537 3699536 3699533 3699538, overlap 3699535 3699538 ACCTGAGAAAAGAAC CCGTC--ATCAGGTGGTGCCT GATC AGGCACCACCTGATACGTCAG TTTACGGACGATATT TERM 5853 3699576 - 3699538 - R 100 -21.3 -2.50387 | gap 1, opp_overlap 3699535 3699537 3699538, overlap 3699537 3699536 3699533 CCTGAGAAAAGAACC CGTCATCAGGTGGTGCCT GATC AGGCACCACCTGAT-ACG TCAGTTTACGGACGA TERM 5854 3699538 - 3699576 + r 100 -21.3 -2.64155 | gap 1, opp_overlap 3699538 3699537 3699536 3699533, overlap 3699535 3699537 CCTGAGAAAAGAACC CGTCATCAGGTGGTGCCT GATC AGGCACCACCTGAT-ACG TCAGTTTACGGACGA Dole_3087 3699953 - 3699741 - | hypothetical protein Dole_3088 3701211 - 3700144 - | hypothetical protein TERM 5855 3700632 - 3700615 - G 83 -4.7 -5.1356 | CTCCACGAAGAAAAA GCGCCCC AGCA GGGAGGC CATTCTCAGCTCCGC TERM 5856 3701384 - 3701398 + r 88 -7 -5.06414 | overlap 3701385 TCCACTTTCCCGCTG GGGGGC AAA GCCCCG TTTTTCTTGCGGGAA TERM 5857 3701385 - 3701397 + r 79 -10.5 -3.63367 | overlap 3701384 CCACTTTCCCGCTGG GGGGC AAA GCCCC GTTTTTCTTGCGGGA Dole_3089 3702477 - 3701524 - | Type II site-specific deoxyribonuclease Dole_3090 3704057 - 3702474 - | site-specific DNA-methyltransferase TERM 5858 3702787 - 3702801 + g 70 -2.7 -4.85545 | GGCTCGATCACGCTG GCGAC CACCC GACGC TTTTCTTCCTTTGAT TERM 5859 3704237 - 3704224 - R 75 -3.7 -5.02074 | overlap 3704209 3704225 CCATTTTTTAAAAAA GGCCG TTTG CGGCG GTAAAAAATTTTCAG Dole_3091 3705375 - 3704359 - | transposase IS4 family protein Dole_3092 3707923 - 3705548 - | molybdopterin oxidoreductase TERM 5860 3705727 - 3705743 + g 72 -5.1 -4.62984 | overlap 3705721 TCCACCATCCGTGGC GGACC CCGACCA GGTCC TTTTGTATATCCTCG TERM 5861 3706069 - 3706087 + g 80 -2.3 -5.252 | opp_overlap 3706052, overlap 3706074 GCTCCACTTTGCCGC TGGGGGT GGCAA AGCCCCG TTTTTTGTGCGGGTA Dole_3093 3708810 - 3707965 - | hypothetical protein TERM 5862 3708550 - 3708561 + g 74 -7.2 -4.36914 | AAAGTCCTCCATATC CCGG TAGC CCGG TTTTATGGCCCCAAC Dole_3094 3709659 - 3709084 - | putative lipoprotein Dole_3095 3710327 - 3709725 - | multiple antibiotic resistance (MarC)-related protein TERM 5863 3710114 - 3710090 - G 72 -8.5 -3.93742 | overlap 3710085 CGGACAGAAACAGAA GCGCCCCGG CCCCGAT CCGGAACGC GTCAAGGGTGATGCC Dole_3096 3711383 - 3710346 - | hypothetical protein Dole_3097 3713577 - 3711364 - | adenine-specific DNA methylase containing a Zn-ribbon-like protein TERM 5864 3712654 - 3712639 - G 71 -6.8 -4.14243 | opp_overlap 3712647 CATCTGACGGTAAAA CCGGTA TCCC CACCGG TGCAGCCTGTCGGTT TERM 5865 3712812 - 3712783 - G 100 -12.8 -5.00616 | CGGCTTTTTAAAAAA CCGGCCCGCATG GGAAGG CTTGCAGGCCGG GCAGTGATACTCGAT Dole_3098 3713930 - 3713643 - | hypothetical protein Dole_3099 3715275 - 3714199 - | hypothetical protein TERM 5866 3714775 - 3714762 - G 85 -3.1 -5.40072 | GGCTTGGTAAAAAAA CATCC ACAG GGATA TCTCGATTACGATCA TERM 5867 3715533 - 3715511 - R 74 -9.8 -3.57792 | overlap 3715513 3715519 GCAGGCACCCCCAAA GAGACAGAGG CGT CCTCCGTCGC CAAGGTTATAGGAGA TERM 5868 3715531 - 3715513 - R 78 -11 -3.36694 | overlap 3715511 3715519 AGGCACCCCCAAAGA GACAGAGG CGT CCTCCGTC GCCAAGGTTATAGGA Dole_3100 3717602 - 3715644 - | ferredoxin TERM 5869 3716795 - 3716805 + g 74 -8.2 -4.11216 | CGTGGAGTTTTTTCA GCCC GCC GGGC TTTTCCGCGTGCACG TERM 5870 3717779 - 3717749 - R 100 -17.7 -5.75342 | GTTCCGGAAAAAAAA GCGGGAAAGCATG ACATG CACGCTTTCCCGC CGAAAAACATCCTTT Dole_3101 3718973 - 3717810 - | 3-hydroxybutyryl-CoA dehydrogenase Dole_3102 3720251 - 3719058 - | acyl-CoA dehydrogenase domain-containing protein TERM 5871 3720025 - 3720044 + g 100 -2.8 -5.84011 | gap 1 ATGGTGCCCAGGTTG GTG-CCGGT GTC GCTGGCCAC TTTTTCTTTTTTCTT TERM 5872 3720059 - 3720075 + g 85 -2.1 -5.51353 | overlap 3720060 3720062 CTTTTTCTTTTTTCT TGTCGGT ATC ACCGTCC TTTTTCTTCTTTTTC TERM 5873 3720173 - 3720215 + g 73 -3.5 -4.7657 | gap 2, overlap 3720177 ATTTGCGTGCAATGG GTCGCAGCATGGACTTGGACA GGG TGTTCATGCTCATGC-G-GAC TTTTTCCAGTTTTTC Dole_3103 3721402 - 3720308 - | acyl-CoA dehydrogenase domain-containing protein Dole_3104 3723269 - 3721605 - | TRAP dicarboxylate transporter- DctP subunit TERM 5874 3721759 - 3721739 - G 75 -10.4 -3.64703 | GGTCCTCCACGGAAA GCGGCACG GGCTT CATGCCGC ACTTGACCTGAAACG TERM 5875 3721895 - 3721905 + g 72 -5.4 -4.45945 | CGGACACACCGAACT GCTT GCG AAGC TTTTCCTTGGTGGCT TERM 5876 3722169 - 3722181 + g 72 -4.7 -4.57073 | overlap 3722170 TTTCAGGTCAGCCAG GCCGG CCA CCGGG TTTTTGAAAAACATG TERM 5877 3723237 - 3723212 - G 100 -7.5 -5.67063 | CGCAGGATAAAAAAA TCGCGAGACAC ACGC ATGCCACGCGA TGTCCGATGTGCCGA Dole_3105 3724720 - 3723449 - | hypothetical protein TERM 5878 3723595 - 3723578 - G 83 -7.7 -4.56597 | opp_overlap 3723593, overlap 3723593 TTTCCGGCGTAAAAA CGGATCC GTCA GAATCCG GTCTGCCAACTGCCG TERM 5879 3723976 - 3724004 + g 78 -3 -5.10077 | overlap 3723971 3723977 GCATGTCCAGCAGCA CCGGGTCGATGA TGTAT TCACCTACCCGC TTTTTTAAAATGTTT Dole_3106 3725256 - 3724786 - | hypothetical protein TERM 5880 3725022 - 3724992 - G 71 -13.2 -2.62184 | opp_overlap 3724965 3724992 TGTCTTTCCAGATCA GGCCGAAGTCCCTT GGT ATGGGACGCCGGCC GGAGCGCAGCCTGCC TERM 5881 3725520 - 3725535 + r 77 -10.4 -3.54424 | opp_overlap 3725519 ATGTTTCCAATTCAG TCCCGC CATG GCGGGA TTTCGCAAGGTCAAG Dole_3107 3726220 - 3725651 - | sterol-binding domain-containing protein Dole_3108 3726443 - 3727147 + | TetR family transcriptional regulator TERM 5882 3727190 - 3727180 - f 85 -4.6 -5.52384 | TCTCCATGAAAAAAA CCGG CAA CCAG CACACGAGGTAAACA TERM 5883 3727515 - 3727498 - g 77 -8.3 -4.4078 | overlap 3727500 CGTGGTCAATGAAAA GGGCCGG CTGA CCGGCTC CAACACCGACGGCCC TERM 5884 3727577 - 3727555 - g 70 -4.1 -4.61527 | gap 1 AAAAGCCCTTAAAAA TGCCGGGGTG GAAA CATCC-GGCA AAACCGTTCTGATGC TERM 5885 3727727 - 3727717 - g 79 -6.8 -4.62069 | GTCGGACCTGAAAAA CGGA ACG TCCG CCACCATCACTGCCG TERM 5886 3727785 - 3727760 - g 83 -9.7 -4.30719 | gap 1, opp_overlap 3727763 GGCTTTGAGAATAAA GCCCTGGCCCAT GCC ATGGCCC-GGGC CGATATCGTGATTCA TERM 5887 3728025 - 3728000 - g 70 -3.9 -4.59773 | opp_overlap 3728000, overlap 3728004 3728014 CTTCAGTTTGAAAAA TTCACCGGC GAAACCGG GCCGGCGGA TGTGATGCGCCGGGT Dole_3109 3727205 - 3728065 + | shikimate 5-dehydrogenase Dole_3110 3728062 - 3728586 + | shikimate kinase TERM 5888 3729297 - 3729308 + G 100 -5.8 -5.95539 | GGCTTCATCGCCTTC GGTG CCTA CACC TTTTTTTGTTTCGGC TERM 5889 3729431 - 3729458 + G 90 -11.2 -4.32177 | overlap 3729436 CATTGACACCCTCAA CGGCGCCGTGGC CGCG GCCACGGTCCTG TTTCTTCTGGCATGG TERM 5890 3729436 - 3729453 + G 74 -12.7 -2.96748 | overlap 3729431 ACACCCTCAACGGCG CCGTGGC CGCG GCCACGG TCCTGTTTCTTCTGG Dole_3111 3728583 - 3729812 + | hypothetical protein TERM 5891 3730275 - 3730262 - T 88 -2.4 -5.82388 | opp_overlap 3730273 AAATCGTAAAAAAAA CCAT TTGTGG ATGG AAACTTTCTATTTTG Dole_3112 3731692 - 3730283 - | hypothetical protein TERM 5892 3731116 - 3731103 - G 75 -3.7 -4.83169 | opp_overlap 3731103 3731102, overlap 3731104 AGGCCGGCATAAAAA TGGGG CCGT CCCCG CTTTAGCAGTATGCA TERM 5893 3731226 - 3731211 - G 78 -6 -4.7153 | AAAGAACCGTAAAAA GGCAGG CAGA CCAGCC ACACGGGAGAGACTG TERM 5894 3731692 - 3731674 - G 74 -2.4 -4.91109 | TTGCCACGATAAAAA GCGCAAAA AAC TTTTTCAC TGCATGGCCCCGTAA Dole_3113 3733521 - 3731689 - | TPR repeat-containing protein TERM 5895 3732587 - 3732604 + g 74 -7.7 -4.11216 | gap 1 GTCCAGTAGGCTGAC GC-CTCCC GGG GGGAGAGC TTTTCCCCCTGGCGG TERM 5896 3732844 - 3732826 - G 85 -10.2 -4.33851 | overlap 3732827 3732839 3732840 AAATCCCAGAACAAA GCCGGCCA GAA CAGCCGGC CAGGTACGCACCGGC TERM 5897 3733159 - 3733146 - G 83 -9.5 -4.37886 | CCATGCCTGAGAAAA GGCCC ACCC GGGCC CCGCCCATGCGTCGG Dole_3114 3734252 - 3733518 - | glycosyl transferase family protein Dole_3115 3735183 - 3734329 - | TPR repeat-containing protein TERM 5898 3734923 - 3734947 + g 79 -12.8 -3.39327 | opp_overlap 3734907 CGGGGCCAGCTCAAC GGCCCTGTCC AGGTC GGCCAGGGCC TTATCCATCTGGCCC TERM 5899 3735936 - 3735920 - g 83 -13.7 -3.55548 | CAACAGTTCCCGAAA CCCCGCT ATC AGCGGGG ACGGCCGGTATGTAG TERM 5900 3736165 - 3736208 + G 77 -10.3 -3.85698 | gap 1, overlap 3736166 3736169 TCTATTCTGATGCCG C-CAACCTGACGGCCGACAG CGACA CTTTCGGCAGTCAGGATGTG TTTATCCGGGACACC TERM 5901 3736166 - 3736206 + G 83 -14 -3.51934 | overlap 3736165 3736169 CTATTCTGATGCCGC CAACCTGACGGCCGACAG CGACA CTTTCGGCAGTCAGGATG TGTTTATCCGGGACA TERM 5902 3736169 - 3736203 + G 78 -14.3 -2.59797 | overlap 3736166 3736165 TTCTGATGCCGCCAA CCTGACGGCCGACAG CGACA CTTTCGGCAGTCAGG ATGTGTTTATCCGGG TERM 5903 3736758 - 3736742 - g 100 -15.1 -4.11216 | opp_overlap 3736740 TGTCGATTTTGAAAA CGCCGGC GTT GCCGGCG CCTATCTGCGGGATA Dole_3116 3735585 - 3737219 + | WD40 domain-containing protein TERM 5904 3737246 - 3737267 + F 100 -17.3 -5.43621 | opp_overlap 3737246 CCGACTGAATACAAA GGCGGGGCT AAAA AGCCCCGCC TTTTTTGTCCTTTCT TERM 5905 3737267 - 3737246 - f 100 -17.3 -4.21607 | opp_overlap 3737246 CCGACTGAATACAAA GGCGGGGCT AAAA AGCCCCGCC TTTTTTGTCCTTTCT Dole_3117 3737583 - 3739229 + | WD40 domain-containing protein TERM 5906 3739256 - 3739277 + T 100 -14.4 -5.43621 | opp_overlap 3739256 TCGACTGAATACAAA GGCGGGGC CAAAAA GCCCCGCC TTTTTTGTCCTTTCT TERM 5907 3739277 - 3739256 - T 100 -15.1 -4.21607 | opp_overlap 3739256 TCGACTGAATACAAA GGCGGGGCC AAAA AGCCCCGCC TTTTTTGTCCTTTCT Dole_3118 3740031 - 3739324 - | glycosyl transferase family protein TERM 5908 3739475 - 3739462 - G 72 -9.5 -3.69621 | overlap 3739463 ATTCACAACCGCAAA CCCGG CCCG CCGGG CCCGAATCAAAAACT TERM 5909 3739629 - 3739603 - G 80 -4.5 -5.00616 | gap 2 GCTTTTTCCAAAAAA CAGGG-TGAC-CA GCA TGTGCCATCCCTG GGCATACAAACATCG TERM 5910 3739759 - 3739722 - G 71 -7.8 -4.05004 | gap 1 CCAGCAGAACAATAA TCTCACCCACGTCAAAC TGCAT GTCCG-CGTCGGTGAGA AACACCAGTTCCTTT TERM 5911 3739808 - 3739819 + g 79 -7.2 -4.71426 | opp_overlap 3739789, overlap 3739801 GTGAGCATGGCGGCC CCGG ACCC CCGG TTTTGTTCATGCCGA TERM 5912 3740968 - 3740946 - g 75 -12 -3.19936 | opp_overlap 3740943 AACCATGCAAGGCAA CGGACAGGCT GGA AGCCTGTCTG GGGTTCGGTGATTTT Dole_3119 3740315 - 3741493 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Dole_3120 3742511 - 3741963 - | hypothetical protein TERM 5913 3742383 - 3742362 - G 80 -9.3 -4.19735 | GTTTTTAAAATCAAA GTCCGGCCA CAGC CGGCCGGCC CGGAAAACATACTCG Dole_3121 3743887 - 3742508 - | hypothetical protein TERM 5914 3743008 - 3742994 - G 74 -2.7 -5.00616 | overlap 3742979 3742995 CCCGGCGTCAAAAAA CCGCC GGTTG GGCCG GGCAAATGAATAATC TERM 5915 3743058 - 3743069 + g 79 -5.8 -4.81249 | ATGCGGTCGGCGATG GACC GGAC GGTC TTTTTCCATTTCAGA TERM 5916 3743491 - 3743530 + g 83 -9.9 -4.36914 | gap 1, opp_overlap 3743472 3743513, overlap 3743496 CGGGGATTTCGGGCA GACCCGGCGGCA-GGGCC AGAAA GGCCCGTGCCCCCTCGTC TTTTCTGGAAAAAAA TERM 5917 3743838 - 3743811 - G 87 -7.8 -4.83169 | gap 1, opp_overlap 3743810 3743812, overlap 3743813 ACGGCCTGATAAAAA TA-GGAGGCAAAG CGG CTTTGCCGCCATA ATTGTGATAACACGT TERM 5918 3743835 - 3743813 - G 86 -12 -4.03995 | opp_overlap 3743812 3743810, overlap 3743811 GGCCTGATAAAAATA GGAGGCAAAG CGG CTTTGCCGCC ATAATTGTGATAACA Dole_3122 3745047 - 3743884 - | hypothetical protein TERM 5919 3744031 - 3744014 - G 75 -5.5 -4.61199 | AGCTGATACACAAAA GACAGAC GCAT GTCCGCC CTCAAGTGACTGACA TERM 5920 3744563 - 3744546 - G 73 -3.3 -4.8048 | opp_overlap 3744562 GTTTCAGATGAAAAA TGGCCAG TCGC CCGTCCA GGGCCGCATCATCAA TERM 5921 3745095 - 3745067 - R 93 -11.8 -4.38927 | opp_overlap 3745070 CCCTCACAGAACAAA TAAGGCGGAAGT ATTGA ACCCCCGCCTTA TTCAAATATTTTACA Dole_3123 3746828 - 3745122 - | acyl-CoA dehydrogenase domain-containing protein TERM 5922 3746516 - 3746501 - G 75 -3.9 -4.82901 | overlap 3746503 TGTCCCCGAGAAAAA CCGGG TCCAAC CCCAG AGTGGATACATGATA Dole_3124 3747802 - 3747086 - | enoyl-CoA hydratase/isomerase TERM 5923 3747894 - 3747873 - R 78 -8.1 -4.36586 | opp_overlap 3747865, overlap 3747865 ATATAACCAAAAGAA TCTTTCGTG TCTC CACAAAAGA TGGGTGGACTCTATT Dole_3125 3750020 - 3747909 - | putative sigma54 specific transcriptional regulator TERM 5924 3748001 - 3748017 + g 73 -3.5 -4.74598 | opp_overlap 3747996, overlap 3748002 TTTTCAGAATCTCCG CGGCACC GCC GGGCCCG TTTATTTTGCCTTTG TERM 5925 3748629 - 3748646 + g 75 -4 -4.72272 | overlap 3748610 CATTTTCCGGCTCTC GGCGCC GGTGAA GGCCCC TTTTTCATGCCCGAA TERM 5926 3749461 - 3749473 + g 100 -3.3 -6.17184 | opp_overlap 3749461, overlap 3749461 ACAGGCTCATAATGA TCCGG CCC CGGGA TTTTTTTTTCGTGGT Dole_3126 3752071 - 3750017 - | sigma-54 factor interaction domain-containing protein TERM 5927 3750175 - 3750195 + g 72 -6.1 -4.371 | opp_overlap 3750178 3750179, overlap 3750179 GAACAAAAAGGTCAT CAAGGGACA GGA TGTCCTCTG TTTTCATGTCATGAC TERM 5928 3750915 - 3750898 - G 80 -9.8 -4.25104 | opp_overlap 3750874 3750909 CTCCTGTCAGCAAAA CCGGGC TGTCCT GCCCGG CGACGAGGCGGGCAT TERM 5929 3750909 - 3750929 + g 74 -8.2 -4.22346 | opp_overlap 3750898 AAAACCGGGCTGTCC TGCCCGGC GACGA GGCGGGCA TTTTCCATGACTTTC TERM 5930 3751445 - 3751414 - G 70 -2.2 -4.82901 | GCTGCCGGACAAAAA GTGCGTCAGCCG GCATAAAT CGGCTGAGATAC TGAAGGCATTGGGAA TERM 5931 3752841 - 3752823 - g 80 -4.6 -4.93365 | opp_overlap 3752823 3752825, overlap 3752825 CTGTACAATGAAAAA TATATTCC CCA GGAATATC TTGATGAAATGCACG Dole_3127 3752334 - 3753815 + | hypothetical protein TERM 5932 3753911 - 3753873 - f 100 -19.1 -4.28045 | gap 1, opp_overlap 3753880, overlap 3753880 AGATCAGCAAAAGAA CAGAAAACGGCCGTGGCA TAAT CGCCACGGCCGTTTT-TG CAATCAGACTGGAGT TERM 5933 3753880 - 3753905 + F 100 -17.6 -4.62069 | opp_overlap 3753873 3753880 CAAAAGAACAGAAAA CGGCCGTGGC ATAATC GCCACGGCCG TTTTTGCAATCAGAC TERM 5934 3753905 - 3753880 - f 100 -18.3 -4.88288 | opp_overlap 3753880, overlap 3753873 CAAAAGAACAGAAAA CGGCCGTGGCA TAAT CGCCACGGCCG TTTTTGCAATCAGAC TERM 5935 3754094 - 3754077 - g 83 -7.7 -4.56791 | gap 1, overlap 3754080 ATCTAAAAAGAGAAA GCAGCCTG TGT CAGGC-GC CGGGACGGAGAAGGG Dole_3128 3754054 - 3755643 + | apolipoprotein N-acyltransferase Dole_3129 3756724 - 3755768 - | hypothetical protein TERM 5936 3755959 - 3755977 + g 80 -2.3 -5.1861 | CGGCGGTGGTAAATT CTGTCTG TTGGC CGGCCAG TTTTTTAATGGTGGC TERM 5937 3756334 - 3756315 - G 72 -5.6 -4.4891 | gap 1, opp_overlap 3756316, overlap 3756316 CTCATCAGGATAAAA TCCGCCTGG CTG CC-GGCGGT AATGTATTTTTTGAT TERM 5938 3756635 - 3756651 + g 100 -2.9 -6.06723 | opp_overlap 3756631, overlap 3756632 3756637 TGGAAAGGCAACGGC GATGGTG TCT CGCCATG TTTTTTTTTGCAGGC TERM 5939 3756637 - 3756649 + g 75 -5.5 -4.69028 | opp_overlap 3756631, overlap 3756632 3756635 GAAAGGCAACGGCGA TGGTG TCT CGCCA TGTTTTTTTTTGCAG Dole_3130 3758180 - 3756732 - | VWA containing CoxE family protein Dole_3131 3759084 - 3758173 - | ATPase TERM 5940 3758398 - 3758412 + g 70 -4.2 -4.62054 | TTTTTCCAGCAGGGC CCGG TCGATTC CCGG TATTTTTTTTCTGAC TERM 5941 3758552 - 3758532 - G 70 -2.4 -4.85599 | opp_overlap 3758532 3758534 TTGACGTCAGAAAAA CAGCCGGC CGGGT GATGGCTG TCTTGGTGCCGATTT TERM 5942 3759581 - 3759568 - g 74 -8.1 -4.18058 | AAGGATATTTTAAAA CGCCA TGGC TGGCG CCTTGACCGGGCAGT TERM 5943 3759659 - 3759673 + G 78 -2.8 -5.1675 | overlap 3759653 CAAGATGGCTCACCA GAATCA CGG TGATGC TTTTTTCCTGGCTGA Dole_3132 3759538 - 3760434 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Dole_3133 3763508 - 3760488 - | von Willebrand factor type A TERM 5944 3760777 - 3760745 - G 79 -12.8 -3.40403 | gap 1, opp_overlap 3760745 3760744 CGTCGCTCAGGAGAA TCAGCAACCG-GTGG TCCG CCTCACGGTTGCTGA GTTTGGAAACGGCGT TERM 5945 3760745 - 3760777 + g 73 -12.8 -2.71791 | gap 1, opp_overlap 3760745, overlap 3760744 CGTCGCTCAGGAGAA TCAGCAACCG-GTGG TCCG CCTCACGGTTGCTGA GTTTGGAAACGGCGT TERM 5946 3761022 - 3761039 + g 80 -2.6 -5.31275 | opp_overlap 3761009, overlap 3761006 3761024 CACCCGCTTGTCGTC GCGGGA TGATTT TCCCCC TTTTTTATCCTGCGA TERM 5947 3761173 - 3761183 + g 80 -2.4 -5.24129 | opp_overlap 3761160 ACCCTGTCCGAAGGA ACGG CCC CCGC TTTTTTATCAACAAC TERM 5948 3761265 - 3761296 + g 78 -8.6 -4.11394 | gap 1, opp_overlap 3761257 3761265 GATAATATCCAACGA CGCCGG-CCGGATCC GCT GGAACTGGGCCCGCG TTTTGCGGATAAGGT TERM 5949 3761505 - 3761519 + g 76 -12.8 -3.14344 | opp_overlap 3761504 3761503 3761501 TTTTATATCAACACT GCCCGG GTC CCGGGC TTCATCGCCGCCGTC TERM 5950 3762030 - 3762011 - G 75 -5.6 -4.56597 | opp_overlap 3762011 3762021 3762028 3762029 GGGCCGCGCCAAAAA GGTCGTCC CGGG GGACATCC CTTTTTAAAAGGGCG TERM 5951 3762021 - 3762031 + g 72 -4.6 -4.56775 | opp_overlap 3762011, overlap 3762011 3762028 3762029 AAAAAGGTCGTCCCG GGGG ACA TCCC TTTTTAAAAGGGCGT TERM 5952 3763467 - 3763455 - G 95 -6.9 -5.45726 | opp_overlap 3763466 GATACTGGAAAAAAA GGCGA TAT CCGCC GCTTCCGGCAGCCGG Dole_3134 3764357 - 3763515 - | ATPase TERM 5953 3764410 - 3764395 - R 80 -2.6 -5.38047 | TATTTATATAAAAAA TTATAC AATC GTACAA AAAATACCTCCGCCT Dole_3135 3764918 - 3764529 - | PilT domain-containing protein Dole_3136 3765172 - 3764915 - | hypothetical protein Dole_3137 3765494 - 3766750 + | putative GTP-binding protein TERM 5954 3766860 - 3766880 + F 74 -2.6 -5.02357 | opp_overlap 3766860 ATGTTGAATAAACTA CCAAAAAT TTTTT ACTTTTGG TTTTATTTGGTTCTA Dole_3138 3767017 - 3767610 + | hypothetical protein TERM 5955 3768410 - 3768384 - g 90 -7.4 -5.14563 | gap 1 GCTTTTATGAAAAAA CTCAGACAGGA TCATGT TCCTG-CTGAG TTCGAAACCATCGTC Dole_3139 3767607 - 3768524 + | hypothetical protein TERM 5956 3768585 - 3768599 + T 74 -2.8 -5.10077 | CGGATTCGAAGTCGT GCTTTT TGA ACAAGC TTTTTTGCCGTATTT Dole_3140 3769450 - 3768737 - | hypothetical protein Dole_3141 3771698 - 3769458 - | N-6 DNA methylase TERM 5957 3770254 - 3770291 + g 75 -8.5 -3.97406 | TCTATTTCATCTTCG TTAATTCCAGCCTCTGT AAAT GCAGAGGTTGGTAATAA TTTCTGCCCTTTTAG TERM 5958 3771431 - 3771442 + g 74 -2.2 -5.01535 | AGAATTGTTTCCAAA GGTA TCGT TGCC TTTTTATCGTTCTGG Dole_3142 3771926 - 3772165 + | hypothetical protein TERM 5959 3772349 - 3772360 + T 73 -2.2 -5.06735 | TCTCGATAAAGGCAG CGGA TGTA TCTG TTTTTATGATTTGTC Dole_3143 3772811 - 3772404 - | MerR family transcriptional regulator Dole_3144 3773189 - 3773521 + | hypothetical protein Dole_3145 3774511 - 3773594 - | hypothetical protein Dole_3146 3775016 - 3774528 - | hypothetical protein Dole_3147 3778142 - 3775032 - | histidine kinase TERM 5960 3776149 - 3776168 + g 100 -6.4 -5.66989 | opp_overlap 3776154 TCCTTGATATTGATT GATAACCC CTTG GGGTTTTC TTTTTTTAATCTTTC TERM 5961 3777823 - 3777846 + g 73 -3 -4.8083 | overlap 3777841 AATGGATGCGTATAG CTTGCCCTGG TGAC CCACGGAGAG TTTTTCCTGATATTA Dole_3148 3778560 - 3778174 - | hypothetical protein Dole_3149 3778858 - 3779124 + | single-strand binding protein/primosomal replication protein n Dole_3150 3779171 - 3779482 + | hypothetical protein TERM 5962 3779508 - 3779531 + F 100 -11 -5.4505 | opp_overlap 3779508 CTTACCAACCAGAAA GCCCTTGGGA GAAA TCCTGAGGGC TTTTTTATTCGGAAA TERM 5963 3779647 - 3779628 - g 100 -4.9 -5.93252 | opp_overlap 3779628 CTTAAAAACAAAAAA TGCCGGC TTGACT GCGGGCA TCATGTGACCTTCGG Dole_3151 3779556 - 3779738 + | hypothetical protein TERM 5964 3780087 - 3780063 - T 75 -7.8 -4.24123 | gap 1, opp_overlap 3780065 3780066, overlap 3780064 3780066 TGAATAACCTCAAAA TCAGGGCACGG TAAA CCGTGCCC-GT TTATATTCTCCGGTA TERM 5965 3780086 - 3780064 - T 76 -11.3 -3.13751 | gap 1, opp_overlap 3780065 3780066, overlap 3780063 3780066 GAATAACCTCAAAAT CAGGGCACGG TAAA CCGTGCCC-G TTTATATTCTCCGGT TERM 5966 3780065 - 3780086 + T 91 -11.5 -4.27519 | opp_overlap 3780064 3780063 3780066, overlap 3780066 AATAACCTCAAAATC AGGGCACGG TAAA CCGTGCCCG TTTATATTCTCCGGT TERM 5967 3780066 - 3780085 + T 91 -15 -3.15788 | opp_overlap 3780066 3780064 3780063, overlap 3780065 ATAACCTCAAAATCA GGGCACGG TAAA CCGTGCCC GTTTATATTCTCCGG TERM 5968 3780085 - 3780066 - T 91 -15 -3.1169 | opp_overlap 3780065 3780066, overlap 3780064 3780063 ATAACCTCAAAATCA GGGCACGG TAAA CCGTGCCC GTTTATATTCTCCGG Dole_3152 3780314 - 3780063 - | hypothetical protein Dole_3153 3780343 - 3780648 + | hypothetical protein Dole_3154 3781870 - 3780983 - | hypothetical protein Dole_3155 3783247 - 3781940 - | TRAP dicarboxylate transporter, DctM subunit TERM 5969 3782123 - 3782110 - G 74 -2.3 -4.96848 | overlap 3782090 GGCTGGAGATAAAAA GGTTG ATGC CCACC GGCGGGGTCAGGTAG TERM 5970 3783031 - 3782999 - G 75 -8.4 -4.08064 | gap 1, overlap 3783000 AAGGGCCTCGGAAAA CCGGATCAGCCGGTC CGCG GACCGGCTC-TCCGC AAAAAGGTAGCCGGC TERM 5971 3783030 - 3783000 - G 73 -11.9 -3.04517 | gap 1, overlap 3782999 AGGGCCTCGGAAAAC CGGATCAGCCGGTC CGCG GACCGGCTC-TCCG CAAAAAGGTAGCCGG Dole_3156 3783823 - 3783293 - | tripartite ATP-independent periplasmic transporter DctQ Dole_3157 3784869 - 3783820 - | TRAP dicarboxylate transporter- DctP subunit Dole_3158 3785393 - 3784869 - | aconitate hydratase domain-containing protein Dole_3159 3786696 - 3785401 - | 3-isopropylmalate dehydratase large subunit TERM 5972 3786401 - 3786387 - G 87 -7.8 -4.72272 | overlap 3786388 3786389 CCTGCTCAGGAAAAA GCGCGT GGC ACACGC CGTTGCGGCCGATAT Dole_3160 3787639 - 3786707 - | diaminopimelate epimerase Dole_3161 3787695 - 3788522 + | putative CoA-substrate-specific enzyme activase TERM 5973 3789895 - 3789933 + G 77 -12.4 -3.57561 | gap 1, overlap 3789894 3789890 AGATCCTGGTCCTGG GCGGC-CCGGCCCCCTG CTTTGC CAGGGAGCTGGAGCTGC TTTCAGGCATTCCCA TERM 5974 3790163 - 3790145 - g 83 -4.5 -5.06414 | TCTTCTCAAGAAAAA GGCCC TGGGCAGAG GGGCC TCCGAGGCCGACCTG Dole_3162 3788637 - 3790355 + | hydantoinase/oxoprolinase TERM 5975 3790808 - 3790780 - g 100 -9.5 -5.1925 | CCACAAGGTAAAAAA GGTGGCCATCGTT GAC ACCGACTGCCACC ACGGCGACGGCACCC Dole_3163 3790349 - 3791665 + | histone deacetylase superfamily protein TERM 5976 3791704 - 3791734 + G 80 -2.6 -5.24531 | gap 2, opp_overlap 3791722 CCACCACTTAAAAAC CCGG-GCACT-TGT CATCA ACGCGGTGCGCCGG TTTTTTCTCGACCGT TERM 5977 3792412 - 3792454 + G 70 -4.6 -4.42062 | opp_overlap 3792389 3792408 3792407, overlap 3792414 3792448 ACAGGAAGAATCCCG CCGAACCGGCCGGGGC CTTGCCCCCCT GCCCCGGCCGAAACAG TTTCTTTCCGACATG TERM 5978 3792504 - 3792524 + G 72 -6.2 -4.36914 | gap 1 CGGGCAACGCTCTGG GCATCGACC GTCT GGTC-ATGC TTTTCTGCGACGCCA TERM 5979 3792535 - 3792562 + G 88 -15 -3.53224 | gap 1 CATGCTTTTCTGCGA CGCCACCACCATC GAT GAT-GTGGTGGCG TTTCCCCCGGAGATG Dole_3164 3791678 - 3792583 + | tRNA synthetase class II (D K and N) TERM 5980 3793028 - 3793015 - f 71 -4.5 -4.63218 | overlap 3793018 3793019 TTGGCGGCAAGAAAA GTACG TTGC CGCAC TGGGGTGCGGCGCTC TERM 5981 3793047 - 3793061 + F 71 -2.7 -4.99043 | GGTGCGGCGCTCCCG GCGTG CAAGA CCCGC TTTTCTTTGTGGGAG TERM 5982 3793082 - 3793098 + F 76 -2.1 -5.26316 | overlap 3793085 TTTGTGGGAGTACGG CATACCG GTG CGGCTTG TTTTTTATCGGGTGG TERM 5983 3793153 - 3793168 + F 93 -4.6 -5.65927 | ACCGGAGGCTATGAC GGACAG GGGA CTGGCC TTTTTTCTTTCCCTC Dole_3165 3793279 - 3793992 + | alpha/beta hydrolase fold TERM 5984 3794208 - 3794194 - g 78 -3.4 -5.04385 | opp_overlap 3794204 3794204, overlap 3794196 CATATTCGCAAAAAA CTGGGC ATC ACCCCG GCATCGGAGGTTGAT Dole_3166 3794140 - 3794367 + | AbrB family transcriptional regulator Dole_3167 3794364 - 3794771 + | PilT domain-containing protein TERM 5985 3795582 - 3795572 - g 81 -4 -5.07275 | CTACATATACAAAAA GTTT CGG AAAC GCATAGACGCGGGCT Dole_3168 3794856 - 3796250 + | TRAP dicarboxylate transporter- DctP subunit TERM 5986 3796409 - 3796383 - T 100 -14.5 -4.65933 | gap 1 GACGTTTAAAACAAA CACGGG-CAGGC TGTC GCCTGGCCCGTG GCACCCGACAAAGAC Dole_3169 3797957 - 3796629 - | xanthine/uracil/vitamin C permease TERM 5987 3797380 - 3797390 + g 77 -2.4 -5.03314 | opp_overlap 3797380 ATACCGAGAATCAAC GCGC CGG GCAC TTTTTTAAGCATCAG TERM 5988 3797659 - 3797645 - G 87 -7 -4.96848 | overlap 3797632 3797630 CGCCGGACACAAAAA CCGCGC CCA GAGCGG TCTGCCAGTCAATGC TERM 5989 3797889 - 3797912 + g 83 -14.6 -3.03513 | gap 1, opp_overlap 3797866, overlap 3797885 CAGAAAGGTAGTGAT GCCGGC-CCGA ATC TCGGTGCCGGC TGTGGTGTTTCTTTC TERM 5990 3798043 - 3798012 - R 100 -18.9 -5.74122 | opp_overlap 3798012 CAGGACATAAAAAAA GGCAGGGGAAAAG ACGATG CTTTTCCCCTGCC TTCTGCTTGTAAGAA TERM 5991 3798012 - 3798043 + r 100 -18.9 -3.56325 | opp_overlap 3798012 CAGGACATAAAAAAA GGCAGGGGAAAAG ACGATG CTTTTCCCCTGCC TTCTGCTTGTAAGAA Dole_3170 3798557 - 3798075 - | cytochrome c, class III Dole_3171 3799448 - 3798675 - | Sec-independent protein translocase, TatC subunit TERM 5992 3798852 - 3798870 + g 88 -5.3 -5.27335 | opp_overlap 3798852 GCCCACAAAAAAGAG CAGAAGG GCATA CTTTCTG TTTTTCTTTAAAAAG TERM 5993 3799258 - 3799246 - G 91 -4.8 -5.51402 | opp_overlap 3799256 AGATAGGTAAAAAAA GCCT CGGGC AGGC CGGTGAAAATCATCT Dole_3172 3799809 - 3799441 - | twin arginine-targeting protein translocase Dole_3173 3800327 - 3799851 - | molybdenum cofactor biosynthesis protein C TERM 5994 3800364 - 3800379 + r 75 -6.1 -4.65747 | TTTGTTTTAACGGGC GGCGT TCGCTT ACGCC TTTTCTTCGGCCTTG Dole_3174 3800735 - 3800373 - | protein involved in biosynthesis of molybdopterin Dole_3175 3801415 - 3800807 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 5995 3801029 - 3801041 + g 70 -4.8 -4.52949 | ATAGACCGCGCACAG GGGT TCCAT ACCC TCTTTTTTTTCCGGC TERM 5996 3801764 - 3801750 - g 85 -3.5 -5.40072 | CGTGTTGCAAAAAAA CAGCC GGTAG GACTG CGCAAAAGCAAGCGC Dole_3176 3801699 - 3802106 + | type IV pilus assembly PilZ Dole_3177 3802245 - 3802799 + | orotate phosphoribosyltransferase TERM 5997 3803239 - 3803261 + G 95 -2.6 -5.83822 | gap 1, opp_overlap 3803227 3803237 3803238, overlap 3803239 AATCCGGGAAGAAGC GGCCC-GAC TGGGGT GCCGGGGCC TTTTTTTTGAATGTC TERM 5998 3803650 - 3803630 - g 76 -3.1 -5.0133 | GAGCCGGTGAAAAAA GCCCTGCCC GAA GACCAGCGC ATCGGCCTTGTCTAT Dole_3178 3802913 - 3804649 + | histone deacetylase superfamily protein TERM 5999 3804683 - 3804649 - f 100 -16.4 -2.92642 | AGGATCATTCACATA GCCTTCCGGCCCGGCA CTC CACCACGCCGGAAGGC AGGCCCGGATCGTCG Dole_3179 3804788 - 3805366 + | protein tyrosine/serine phosphatase TERM 6000 3805747 - 3805757 + G 85 -2.4 -5.52384 | CACCCTTGGCATCTG CGGC ACC GCCA TTTTTTTCCTGGCCA TERM 6001 3806233 - 3806257 + G 80 -10 -4.0162 | CATCATTGTTGAACC CCTGCTGATC TGCAT GATCGGCGGG TTTGTGGTGTCCAAC TERM 6002 3806323 - 3806338 + G 79 -6.8 -4.62471 | CCAGGAACTCGGGCC GGCGGT GTAC ATCGCC TTTTTCACACTTACC TERM 6003 3807458 - 3807493 + G 75 -9.9 -3.85698 | gap 3, opp_overlap 3807469 ACCGGCCCGGAAGCC CCGGATGCAAACCGG-CC CAT GGACCGGTTTG-A-CCGG TTTATCGAGGAGGGC TERM 6004 3807924 - 3807886 - g 72 -4.6 -4.56597 | gap 3 GCTGCGGGCCAAAAA CGCCCAGGCCCTGCGAGAA GTGG TGCT-GC-GGGCC-GAGCG GAAACGGCAGGGATA Dole_3180 3805424 - 3807940 + | TrkA domain-containing protein Dole_3181 3810001 - 3807992 - | chloride channel core TERM 6005 3808337 - 3808351 + g 81 -2.8 -5.24129 | CACGTCCTGTACCGA TACCAT GCC AAGGTA TTTTTTCTCCCGGGC TERM 6006 3808529 - 3808516 - G 74 -2.3 -5.00616 | opp_overlap 3808502, overlap 3808502 CCCGTTGGTAAAAAA CGGTT TTCA ATCCG CCAAGGGTCAACGTG TERM 6007 3809512 - 3809492 - G 83 -13.9 -3.53343 | AATGGGCGCGTTAAA GGCGGCGGC AAT GCCGCCGGC GGCGCCACAGGCCAC TERM 6008 3809535 - 3809546 + g 71 -7.2 -4.14392 | CAGGCCACCAGCGTG GCGG TATC CCGC TTTTCCAGGTTAAAC TERM 6009 3810032 - 3810059 + r 71 -10.4 -2.90309 | overlap 3810028 3810043 3810044 TCCGGTTATGCCAAC CGGCCGGGTGGC GACG GCCTTCCAGCCG TCCTGTTGTTTGGGA TERM 6010 3810536 - 3810498 - R 100 -14.6 -5.46706 | opp_overlap 3810498 ACCCTAAAACAAAAA GCCCTTTCCCGGTAAAGT TAA ACAACACCGGAAAAGGGC TTTTGTAAACGACTT TERM 6011 3810498 - 3810536 + r 90 -10.2 -4.37658 | opp_overlap 3810498 ACCCTAAAACAAAAA GCCCTTTCCCGGTAAAGT TAA ACAACACCGGAAAAGGGC TTTTGTAAACGACTT Dole_3182 3811449 - 3810565 - | dihydropteroate synthase DHPS Dole_3183 3812855 - 3811515 - | acetyl-CoA decarbonylase/synthase complex subunit gamma TERM 6012 3812934 - 3812909 - R 100 -20.5 -4.25848 | opp_overlap 3812906 3812903 AATCTCGTAGGAAAA GGGGCGGTCGA CGAA TCGACCGCCCC GGGTCATTACATCAG Dole_3184 3815151 - 3812941 - | bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta TERM 6013 3814823 - 3814811 - G 100 -9.1 -5.45802 | overlap 3814813 TCGGGAAAATAAAAA TCCGG CTC CCGGA CGATCCGTAAGGCCT Dole_3185 3817236 - 3815197 - | carbon-monoxide dehydrogenase, catalytic subunit TERM 6014 3816112 - 3816130 + g 71 -11 -3.30124 | opp_overlap 3816110 3816112 CTTGGTGTGAAAACA CTTGGCCA CGT TGGCCAGG TTCTGGAAGATGCAC TERM 6015 3817054 - 3817074 + g 72 -8.9 -3.794 | opp_overlap 3817051 3817048 TTTACAACAGATTCC CGTTGCGCC GAT GGCGCAGGG TTTCATGGCTTCAGC TERM 6016 3817205 - 3817215 + g 100 -2.4 -6.13503 | GCTTTGTCCGCCTTG GCTG CGA CTGC TTTTTTTTCTTCATC Dole_3186 3818876 - 3817320 - | acetyl-CoA decarbonylase/synthase complex subunit delta TERM 6017 3817720 - 3817742 + g 78 -14.8 -2.52464 | GCTGCCGCTGCCGGA GCCGCGGCAG GTG CTGCCGGGGC TGCCTTGGGCGCAGC TERM 6018 3817797 - 3817824 + g 86 -6.2 -4.96523 | gap 1, overlap 3817765 3817786 3817800 CTTGGGCGCCGCCTT GGGGGCCGC-CTT CTT GGGCGCGGCCTTC TTTTCTTCTTCCTTT TERM 6019 3817800 - 3817821 + g 74 -6.5 -4.54297 | gap 1, overlap 3817765 3817786 3817797 GGGCGCCGCCTTGGG GGCCGC-CTT CTT GGGCGCGGCC TTCTTTTCTTCTTCC TERM 6020 3819238 - 3819187 - R 100 -16.6 -4.35327 | opp_overlap 3819197 3819200 3819234 3819235, overlap 3819182 3819188 3819189 3819235 GGATGAAAAATGAAA GGGTTACCGTCCATGCCGCCGG CGTCGTTT CCGGCGGCATGGACGATAGCGT CTGACGCGTTTTTAT TERM 6021 3819237 - 3819188 - R 100 -20.1 -3.20111 | opp_overlap 3819197 3819200 3819234 3819235, overlap 3819187 3819182 3819189 3819235 GATGAAAAATGAAAG GGTTACCGTCCATGCCGCCGG CGTCGTTT CCGGCGGCATGGACGATAGCG TCTGACGCGTTTTTA TERM 6022 3819236 - 3819189 - R 100 -23.6 -2.50982 | opp_overlap 3819197 3819200 3819234 3819235, overlap 3819188 3819187 3819182 3819235 ATGAAAAATGAAAGG GTTACCGTCCATGCCGCCGG CGTCGTTT CCGGCGGCATGGACGATAGC GTCTGACGCGTTTTT Dole_3187 3820111 - 3819308 - | fructose-bisphosphate aldolase TERM 6023 3819609 - 3819588 - G 81 -8.7 -4.36914 | TTGGTCTTGACAAAA TCGGCGC CCAGTTCC GCGCCGA TGCGGGCCGCCAGCT TERM 6024 3820261 - 3820228 - R 74 -9.5 -3.53091 | overlap 3820214 3820211 3820209 ATCCCGCGTTTTAAA TCGGGATCGACGTCG GGGT CGAGGTCGAGCACGA GTAAGAGTAAGAGTA TERM 6025 3820407 - 3820420 + r 78 -8.1 -4.36914 | GACCTGTTTGTAGTG TGCCC GTAA GGGCA TTTTGTGCGGCCGGA Dole_3188 3821498 - 3820509 - | radical SAM domain-containing protein TERM 6026 3821274 - 3821258 - G 74 -2.2 -5.00616 | TGGCCTTTGAAAAAA TTCTGC TGTCC GCGGAA AACGAACAGAACTTG TERM 6027 3821627 - 3821603 - R 70 -10 -3.17714 | overlap 3821593 3821606 GCAAACCCCGAGGAA TGAGGCGTAC TGATC GTACGCCGCA GTGACGAGGGGTGCG TERM 6028 3821624 - 3821606 - R 71 -10.3 -2.78395 | overlap 3821603 3821593 AACCCCGAGGAATGA GGCGTAC TGATC GTACGCC GCAGTGACGAGGGGT Dole_3189 3822242 - 3821679 - | methyltransferase type 11 Dole_3190 3823011 - 3822406 - | alpha/beta hydrolase family protein TERM 6029 3822723 - 3822711 - G 75 -10.5 -3.68244 | overlap 3822704 AGGAGTAACCGGAAA GGGCC ACC GGCCC GATCCCCCGGTCCTG Dole_3191 3824282 - 3823134 - | 3'-5' exonuclease TERM 6030 3824126 - 3824109 - G 79 -5.5 -4.72272 | GGGGTCGATCAAAAA GGCGTCA CCGT TTACGCC GATCTGGATCAGGCA Dole_3192 3824833 - 3824315 - | hypothetical protein Dole_3193 3826239 - 3824851 - | diguanylate cyclase TERM 6031 3825655 - 3825677 + g 78 -4 -5.00616 | opp_overlap 3825646 GTGAAAGGCCCTCAT GCTGGCCG CATCGGT CCGCCGGC TTTTTTGCGCCAGCC TERM 6032 3826198 - 3826183 - G 79 -6.8 -4.66833 | opp_overlap 3826181 3826183 GGTCAACCCGAAAAA CCGGTC CAGA AACCGG TCTTTGAAGTCAGCA TERM 6033 3826317 - 3826329 + H 73 -3.3 -4.87273 | overlap 3826322 GTATTTCATTATTTA TAGGC TTT GCCGA TTTTTGTCAAATATT TERM 6034 3827916 - 3827931 + G 72 -4.6 -4.63542 | overlap 3827918 TCACCGGGTGATCTA CGGCTC CATT GAGCGG TTTTTAGGCATTCTC TERM 6035 3828225 - 3828175 - g 73 -3.1 -4.8622 | opp_overlap 3828216, overlap 3828177 3828178 GGCGGCAAGGAAAAA GAGGC-GCGCACCCTTTCCGTCCGG ACC CTGGACGGGCAG-GTGCGCCACGGC GTTAGCCATGAAGCG TERM 6036 3828222 - 3828177 - g 71 -8.1 -4.05402 | gap 1, opp_overlap 3828216, overlap 3828175 3828178 CGGCAAGGAAAAAGA GGCGCGCACCCTTTCCGTCCGG ACC CTGGACGGGCAG-GTGCGCCAC GGCGTTAGCCATGAA Dole_3194 3826390 - 3828303 + | threonyl-tRNA synthetase TERM 6037 3828315 - 3828329 + F 74 -10 -3.53012 | opp_overlap 3828314 3828308 3828315 3828317 ATAATTCACAGGAAG CAGTGC GCG GCACTG TTTCGCGGAGGGAAA Dole_3195 3828345 - 3828890 + | Uracil phosphoribosyltransferase TERM 6038 3828987 - 3828963 - f 70 -10 -3.17714 | overlap 3828966 GCAAATTCCGAGGAA TGAGGCGTAC TTGTC GTACGCCGCA ATGACGAGGGGTGCA TERM 6039 3828984 - 3828966 - f 71 -10.3 -2.78395 | overlap 3828963 AATTCCGAGGAATGA GGCGTAC TTGTC GTACGCC GCAATGACGAGGGGT TERM 6040 3829222 - 3829186 - g 79 -7.2 -4.56597 | gap 1, opp_overlap 3829192, overlap 3829187 3829190 GGGCCGGGCCAAAAA GGAGGGCCACACCGTGG TTTT CCACGACGTGGTCA-CC GACAGCGTACCGGCC Dole_3196 3829061 - 3829564 + | molybdenum cofactor synthesis domain-containing protein TERM 6041 3829654 - 3829672 + F 100 -16 -3.05384 | TGTCCTTGCAGCTTG GCCACGCC ACA GGCGTGGC TTCCCTCGCGCAAAC TERM 6042 3829793 - 3829762 - f 85 -7.2 -5.00616 | gap 1, overlap 3829763 3829764 CTTTTCCCGAAAAAA CCGCCCGCGCTCAGC TGC GCTGCA-ACGGACGG GGCAACACGATATGT TERM 6043 3829925 - 3829947 + G 74 -7.1 -4.2772 | overlap 3829926 TCATACTAATCTCTT TTGTACTGA TTTTT TCAGTACAG TTTATATTCGTTGCC Dole_3197 3829885 - 3830283 + | hypothetical protein Dole_3198 3830450 - 3832027 + | AMP-dependent synthetase and ligase Dole_3199 3832298 - 3832020 - | hypothetical protein TERM 6044 3832079 - 3832123 + g 74 -7 -4.34008 | gap 1, opp_overlap 3832104 3832105 TCTGCGTCAAACTGC GGGCTTCCTTGTGCGGCGTAC AACA GTACGCCTC-CGCGTCAGCCC TTGTTTTCCTTGATC Dole_3200 3832760 - 3832362 - | hypothetical protein Dole_3201 3836325 - 3832753 - | glutamine--fructose-6-phosphate transaminase (isomerizing) TERM 6045 3832900 - 3832918 + g 100 -8.1 -5.45802 | GTTCTTGATGCGCTC GGCCTTG CCGCC CAGGGCC TTTTTCTTTTCAAAC TERM 6046 3833140 - 3833155 + g 70 -2.4 -4.77036 | CCGGGACGGTATCTC GGCCAG AACC CCGGTC TTTTTGATAATGGCG TERM 6047 3834431 - 3834441 + g 90 -4.6 -5.45726 | opp_overlap 3834421, overlap 3834430 ACAATGGCCAGAGTG TGGG CCC CCCG TTTTTTTACCATGTC TERM 6048 3834713 - 3834678 - G 74 -2.4 -4.99043 | gap 1, opp_overlap 3834681, overlap 3834679 3834680 GGCCGATAAAGAAAA TGCGGCGGATCGT-GCC GTC GGCCATGGCCCGGCACA GGGCCGGCGGCAGGC TERM 6049 3834681 - 3834733 + g 71 -11.2 -3.28791 | opp_overlap 3834678 3834680 3834679 CGATAAAGAAAATGC GGCGGATCGTGCCGTCGGCCATG-GC CCG GCACAGGGCCGGCGGCA-GGCTGGCC TTCTCCAGGGCGACT TERM 6050 3835086 - 3835126 + g 75 -12.3 -3.28712 | opp_overlap 3835084 3835085 3835108 AGGAGACAATATAGT GGTCCGGCGCCAGGCCCAG AAA CAGGGCCTGGCCGCTGCCC TTCTGGGCAAAAAAC TERM 6051 3836272 - 3836290 + g 85 -11.6 -4.07568 | opp_overlap 3836271 3836272 CGATACGTCAACAAC CGGCGCCG GTC CGGCCCCG TTTTGAAACGGAACA Dole_3202 3837411 - 3836350 - | iron-containing alcohol dehydrogenase Dole_3203 3838609 - 3837422 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 6052 3838682 - 3838726 + r 76 -7 -4.34008 | gap 1, opp_overlap 3838707 3838708 TCTGCGTCAAACTGC GGGCTTCCTTGTGCGGCGTAC AACA GTACGCCTC-CGCGTCAGCCC TTGTTTTCCTTGATC TERM 6053 3838827 - 3838839 + r 82 -10.5 -3.86897 | opp_overlap 3838818, overlap 3838822 ATTTAAGCCGCGTCC CCGGC GGG GCCGG TTTATCGACCGTGGC Dole_3204 3840732 - 3838810 - | methionyl-tRNA synthetase TERM 6054 3839401 - 3839428 + g 73 -11.2 -3.34715 | opp_overlap 3839400, overlap 3839398 CAGGGTGTAGATCAC CGCGGCCAGGGC ATCG GCTTTGGCCGGG TCTTTGGCAAGGGTC TERM 6055 3839616 - 3839626 + g 83 -8.2 -4.64598 | TGGCGTCGTCTGCTG CCGG CAC CCGG TTTTTAAAATACTTG Dole_3205 3841605 - 3840751 - | PSP1 domain-containing protein Dole_3206 3842600 - 3841602 - | DNA polymerase III, delta prime subunit TERM 6056 3841841 - 3841853 + g 72 -5.5 -4.51812 | TCATGCCCAGCCACT GACCG ATC TGGTC TTTGTTCTTCTGCAG TERM 6057 3842008 - 3842024 + g 76 -5 -4.72272 | opp_overlap 3842006, overlap 3842006 CCGCCGGACATCAGG GCCGCC GACCG GGCCGC TTTTTCGTCCACGCC TERM 6058 3842462 - 3842501 + g 71 -7.2 -4.14243 | gap 2, opp_overlap 3842466 3842489, overlap 3842463 CCTGGACGGCGGCAA GGCAGTTGCACGCCATGG CAAAAC CCATGGCG-GC-GCTGCG TTTTCCAATGCCGTC Dole_3207 3842901 - 3842626 - | histone family protein DNA-binding protein Dole_3208 3845456 - 3843057 - | organic solvent tolerance protein TERM 6059 3843678 - 3843714 + g 71 -7.9 -4.09353 | overlap 3843680 GCCCCGCCACTCCTT TACGGTCAGCAGGTTGG TGA CCGACCAGGTGACGGTG TTCTGTTTTTCAATG TERM 6060 3845235 - 3845245 + g 74 -8.2 -4.14739 | overlap 3845222 GGCCCCGGCGTCAAT GCGC CAG GCGC TTTTCGGGTCCATGC TERM 6061 3845370 - 3845349 - G 100 -3.7 -5.9873 | opp_overlap 3845351, overlap 3845350 3845351 CCACCACAAAAAAAA TTTCATGAC GCCT GGCACGAAA AACCGTTGCCCTGCA TERM 6062 3845351 - 3845391 + g 100 -4.7 -5.93252 | gap 1, opp_overlap 3845349 3845350 3845351 ACCACAAAAAAAATT TCATGACGCCTGGC-ACG AAAAAC CGTTGCCCTGCATCATGA TTTTTTCTTTTTGGG TERM 6063 3845880 - 3845899 + G 95 -7 -5.44119 | overlap 3845881 CATCTACAGTGCGGC CGCCGGCG CCCT TGCCGGCA TTTTTTTCACCTGGC TERM 6064 3845881 - 3845898 + G 77 -10.5 -3.85748 | overlap 3845880 ATCTACAGTGCGGCC GCCGGCG CCCT TGCCGGC ATTTTTTTCACCTGG TERM 6065 3846115 - 3846085 - g 73 -3.2 -4.77757 | gap 1, overlap 3846080 3846087 3846089 CGGGAAAAATCAAAA GAGATGGCCGCCT TTGCCC AGGCCGCCA-CGC AAACCCTGAAGGACA TERM 6066 3846139 - 3846119 - g 81 -11.9 -3.64822 | opp_overlap 3846118 3846117, overlap 3846129 AGGCCGCCACGCAAA CCCTGAAGG ACA CCTTCAAGG GGCTTTCCGCCGACA Dole_3209 3845848 - 3847218 + | hypothetical protein TERM 6067 3847214 - 3847227 + F 80 -4.5 -5.1417 | opp_overlap 3847212 3847214 AGGAGGAAGAGGAGA CCTGA CCGG TCGGG TTTTTCCTTTTATCG TERM 6068 3847578 - 3847527 - f 77 -10.4 -3.53811 | overlap 3847528 TCGATCTTTCTTAAA GTGTTTTTCAGTGTACTTTTCTTG GCGG CAAGAAAAGTACAATGGAAAGCAA TGTAAAGGTGGAGAA TERM 6069 3847577 - 3847528 - f 88 -13.9 -2.72144 | overlap 3847527 CGATCTTTCTTAAAG TGTTTTTCAGTGTACTTTTCTTG GCGG CAAGAAAAGTACAATGGAAAGCA ATGTAAAGGTGGAGA TERM 6070 3847759 - 3847748 - f 80 -7.2 -4.56597 | TGCCCGGCCGAAAAA CGCC TGAC GGCG TCACTACAAACACAA TERM 6071 3847881 - 3847912 + G 71 -12.5 -2.69871 | opp_overlap 3847877, overlap 3847880 3847879 CTCGACATATAGTTA CGTATGGGAAAAT GATAAA GTTTTCCCATACG ATATTTGCTCTGCCC TERM 6072 3848091 - 3848077 - g 86 -8.5 -4.62069 | opp_overlap 3848088 GTTTGACGCCAAAAA CCCGC GCACG GCGGG CCGGGAGATTCCAGC Dole_3210 3847859 - 3848731 + | 4-hydroxybenzoate polyprenyltransferase, putative Dole_3211 3848728 - 3849327 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 6073 3849451 - 3849461 + G 100 -8.2 -5.75342 | CAAAAGTCCGGGCGG GGGC AAG GCCC TTTTTTTTGAAAAGG TERM 6074 3849624 - 3849612 - g 75 -9.1 -4.08767 | opp_overlap 3849618 3849620 TGGACCCGCCCAAAA GCCTG CGC CAGGC CGCCAGTCTGGTGCC TERM 6075 3850290 - 3850319 + G 84 -2.7 -5.42259 | overlap 3850291 CGCCGCCCATGGAGG ACTGTTACCTGGC CAAG GCCACGGAACGGC TTTTTTTGCCCATGC TERM 6076 3851064 - 3851048 - g 70 -5 -4.431 | opp_overlap 3851057, overlap 3851049 GACGCATGCAGAAAA GGGCCG GTCGA CGGCCA CACGCGGGAGTGGCC Dole_3212 3849320 - 3851104 + | UbiD family decarboxylase Dole_3213 3851179 - 3851667 + | type IV pilus assembly PilZ Dole_3214 3852545 - 3851895 - | sporulation domain-containing protein TERM 6077 3851957 - 3851967 + g 71 -8.2 -4.07568 | opp_overlap 3851948 AGAGCAGCGGGGATG CCGC TTC GCGG TTTTCAAAGGCGCCG TERM 6078 3851998 - 3851976 - G 74 -11.2 -3.53012 | TTCGCGGTTTTCAAA GGCGCCGCAC CGA ATGCGGTGCC AGACAATACCGCCGG TERM 6079 3852347 - 3852362 + g 87 -4 -5.42259 | gap 1 CCAAGGTGTTTTCCC GAGCCTG AGC CAG-CTC TTTTTTTAACGGTGA Dole_3215 3854368 - 3852698 - | arginyl-tRNA synthetase TERM 6080 3854341 - 3854292 - G 85 -11.3 -4.09739 | gap 1, opp_overlap 3854297 TCAATGTCGGGAAAA CGGGAGGCGGTCA-GCGCGCCTTT TTC AAAGGCGGCCGTGGCCGCGGCCCG AATCATGGCCTGCAA TERM 6081 3854297 - 3854311 + g 70 -4.2 -4.56597 | opp_overlap 3854292 GTCGGGAAAACGGGA GGCG GTCAGCG CGCC TTTTTCAAAGGCGGC Dole_3216 3854820 - 3854398 - | hypothetical protein TERM 6082 3854673 - 3854689 + g 87 -9.3 -4.62069 | overlap 3854666 3854664 TGATCAGCTCGCCAA GGCCGGC CTG GGCGGCC TTTTTCAGGTCGGAC TERM 6083 3854868 - 3854849 - R 100 -6.3 -5.53288 | CTTAATCTAAAAAAA GGGGCTG TCACGG CTGCCCC CACCATAATATCGCG TERM 6084 3854928 - 3854939 + r 79 -2.2 -5.4593 | gap 1 CCAGAAATAAAATCG GCTCG GCC CG-GC TTTTTGTTATTTTCG Dole_3217 3856394 - 3854946 - | TrkH family potassium uptake protein TERM 6085 3855604 - 3855577 - G 100 -6.2 -5.67967 | overlap 3855578 3855601 AGCACCAGAAAAAAA CGGCACTCCGGA TTTT TCCAGAAGGCCA GGGTGTTTCCCCGGA TERM 6086 3855860 - 3855834 - G 71 -11.7 -2.97188 | gap 1, overlap 3855827 3855836 GGAGATCAGCAGATA GAC-CCGCCAAA GGGT TTTGGCGGTGTC CCGAATGCGGGGCTG TERM 6087 3856160 - 3856149 - G 79 -7.2 -4.57073 | CAGGGCGCCGAAAAA GCCG GCTC CGGC CCAGCAGAAGGCCAC Dole_3218 3857759 - 3856395 - | potassium transporter peripheral membrane component Dole_3219 3858736 - 3857930 - | hexapaptide repeat-containing transferase TERM 6088 3858513 - 3858483 - G 71 -11.8 -2.92463 | GCCATGACGCACACA TGTTCGCCCAGCCG GAC CGGCCCGCCGAACA CCTCCACGTACCATG Dole_3220 3859778 - 3858729 - | hypothetical protein TERM 6089 3858790 - 3858780 - G 74 -8.2 -4.17316 | ATCGTGGGAAAACAA CCGC GCC GCGG GTGTCAGGCGATACA TERM 6090 3859195 - 3859216 + g 78 -9.3 -4.07568 | overlap 3859196 CGGTTGGCCACGGCG TCGCCCAGG CGGG CCAGGGCGG TTTTCCACCGGGGCC TERM 6091 3859540 - 3859559 + g 78 -6.4 -4.56597 | gap 1, overlap 3859534 CTGTAGGCGGCGTGC CAGC-TGCC GTC GGCGTGCTG TTTTTCCGCCAGCCA TERM 6092 3859826 - 3859812 - R 100 -12.8 -4.64657 | opp_overlap 3859810, overlap 3859803 CCAAACGGCGAAAAA CGGGCG ATT CGCCCG GATATGTCATGAAAT Dole_3221 3860933 - 3859848 - | phosphoserine aminotransferase TERM 6093 3860277 - 3860288 + g 70 -3.6 -4.57073 | overlap 3860261 CAGCATGGAGGGCAG GCCG GTGT TGGC TTTTTCCAGAAGGTC TERM 6094 3860557 - 3860596 + g 78 -2.9 -5.04175 | gap 1 TAGGCAAAGTTCCGG TCTTCGGACGAGGCCG CCACGTTAA CGGTTTTG-CCGAGGA TTTTTGTCTCCTTGA TERM 6095 3861216 - 3861187 - g 89 -2.7 -5.78622 | GGATGTGAAAAAAAA CGGGGACAAGGCC CTGG AGCGCTATACCCG GCAATTTGACGCCCC TERM 6096 3861559 - 3861516 - g 86 -8.7 -4.57569 | gap 1 CCATTCCCGCAAAAA CCGCCGGGGTGCGGCGCATC GTGAT GGTG-ACCCCGCCCCGGCAG GACGGCACGGTCAAC TERM 6097 3862097 - 3862081 - g 78 -8.7 -4.20883 | GAAAAATCCGGAAAA GGACCTG GAC CAGATCC GCAACGCCGGCGCCG Dole_3222 3861059 - 3862363 + | histidinol dehydrogenase TERM 6098 3862382 - 3862398 + T 81 -7.9 -4.57073 | overlap 3862384 GGGGGTATGGCTCAC GACAGGG CTT CCCTGAC TTTTTCCGCCAGCTC Dole_3223 3864162 - 3862378 - | histidine kinase TERM 6099 3863482 - 3863494 + g 74 -7.7 -4.12188 | opp_overlap 3863452, overlap 3863475 3863447 GCCGACCAGCTGGCC GATGG CCT CCATC TTTTCGGCCTGGTAA TERM 6100 3863854 - 3863821 - G 100 -17.5 -4.64048 | gap 1, overlap 3863825 GATGATATAAACAAA CGAGTCCAGGCGGGCC ACG GGCTCGCCTGGA-TCG ACCACCATCACGATC TERM 6101 3863851 - 3863825 - G 87 -18 -2.53379 | overlap 3863821 ATATAAACAAACGAG TCCAGGCGGGCC ACG GGCTCGCCTGGA TCGACCACCATCACG TERM 6102 3864106 - 3864091 - G 79 -5.4 -4.86773 | gap 1, opp_overlap 3864081, overlap 3864081 3864092 TAAAACCAGGAAAAA CCGGGCT TTG AGCC-GG CGGTCGATGTCGGCG Dole_3224 3864974 - 3864306 - | hypothetical protein TERM 6103 3864355 - 3864370 + g 87 -6.8 -5.00616 | GCGTTTTCCGCGTGG TCGGCG ATGT TGCCGA TTTTTTCGGCCAGCA Dole_3225 3866219 - 3864984 - | phosphate transporter TERM 6104 3865114 - 3865079 - G 74 -8.3 -4.21974 | overlap 3865104 CGACGATGGAATAAA TGACCCGGAAGTTCA CTGCCT CAAACCCCCGGGCCA GGCCTACGCCGATGA TERM 6105 3865357 - 3865372 + g 71 -7.5 -4.13282 | opp_overlap 3865332 GGTACGGTGTTGATG CCGGC CACGCT GCCGG TTTTAACAATATAAT TERM 6106 3865445 - 3865389 - G 74 -11.4 -3.49835 | opp_overlap 3865406, overlap 3865391 3865394 TTTAACAATATAATA GATCAGGGCCAGGGGGCCGATGGCAT TGGCC ACGTCATTGGCGCCCTGGGCCAGAGC CACATAACAGGAGGT TERM 6107 3865443 - 3865391 - G 79 -12.6 -3.31176 | opp_overlap 3865406, overlap 3865389 3865394 TAACAATATAATAGA TCAGGGCCAGGGGGCCGATGGCAT TGGCC ACGTCATTGGCGCCCTGGGCCAGA GCCACATAACAGGAG TERM 6108 3865440 - 3865394 - G 73 -12.9 -2.81055 | opp_overlap 3865406, overlap 3865391 3865389 CAATATAATAGATCA GGGCCAGGGGGCCGATGGCAT TGGCC ACGTCATTGGCGCCCTGGGCC AGAGCCACATAACAG TERM 6109 3866570 - 3866558 - H 71 -6.9 -4.29953 | overlap 3866555 AAAGTACCAAAAGAA CCGCG CCC CGCAG CTTGGCCTTCGGCTT TERM 6110 3867803 - 3867818 + G 71 -8.2 -4.09685 | opp_overlap 3867796 GCACAAGATGTACCT GGCGGT GCAG GCCGCC TTTTCAGACATGACC TERM 6111 3867980 - 3868012 + G 75 -10 -3.64066 | gap 1, opp_overlap 3868001, overlap 3867978 3867982 GGGCACCTTTTTCCC GCTGATGCTGCTGTT CACC AACATCAGCATC-GC TATTGTTCTTTACGT TERM 6112 3868598 - 3868614 + G 95 -4.3 -5.75538 | overlap 3868588 3868588 CGCGTGCCGGAACGC CGGGCTT CTG GAGACCG TTTTTCTTTTTTCCA TERM 6113 3868799 - 3868826 + G 78 -8.2 -4.55295 | overlap 3868801 TCTTTCGGCCCTTCA GTCCGCGGCCCG GACC CGGACCGCGGTG TTTGTTTCTCACCGG TERM 6114 3868801 - 3868824 + G 100 -15.2 -3.88703 | overlap 3868799 TTTCGGCCCTTCAGT CCGCGGCCCG GACC CGGACCGCGG TGTTTGTTTCTCACC Dole_3226 3867249 - 3868988 + | ABC transporter-related protein TERM 6115 3869387 - 3869362 - g 71 -7.5 -4.12188 | opp_overlap 3869327 3869324 GGAGCACCTGGAAAA GCTGGACAGGA CCGA TCTTGTCCTGC TGCGACAGGACGACA TERM 6116 3869611 - 3869578 - g 79 -7.3 -4.56597 | overlap 3869579 3869580 CTTTTTCTCGAAAAA CCCGGTGGCCCGGCT GGTG ACCCGGACCACCAAC GACATTCAGAACATG Dole_3227 3868985 - 3871012 + | ABC transporter-related protein Dole_3228 3872182 - 3871361 - | silent information regulator protein Sir2 TERM 6117 3871740 - 3871704 - G 78 -6.7 -4.57073 | gap 2, opp_overlap 3871711 GAGGCCGGTGAAAAA TCGGGCAGGGTGGAAAG CCGCT CTTTT-ACCC-GCCCGA TCAGGGCATGGCGTT TERM 6118 3872130 - 3872101 - G 77 -12 -3.53012 | overlap 3872117 3872120 CGCTTTCCGCGGAAA CCCCGGCCCCGG AAAAGA CCGCGGCCCGGG AGGCGCCGGCCAGCA Dole_3229 3873397 - 3872216 - | hypothetical protein TERM 6119 3872311 - 3872285 - G 70 -4.2 -4.67608 | overlap 3872286 CACCTGAACATAAAA CCCGTCGGCCCG GAT CGCGCCAATGGC ACCGGCCAGGGCCTC TERM 6120 3872813 - 3872783 - G 71 -11 -3.2794 | opp_overlap 3872804 3872805 GCCCAGCGACACGAA CCGGGCCGGCGC CATGTCC GCCCCGGCCTGG CCCGATTCCCCGGCC Dole_3230 3874440 - 3873457 - | polyprenyl synthetase Dole_3231 3875759 - 3874437 - | MiaB-like tRNA modifying enzyme YliG TERM 6121 3875485 - 3875469 - G 89 -2.1 -5.75342 | opp_overlap 3875470, overlap 3875470 3875471 GGTGCCGAAAAAAAA GTCTGCC TCG GGCAGGG CCCCGGCCAGCTCTT Dole_3232 3876585 - 3875761 - | enoyl-CoA hydratase/isomerase TERM 6122 3875925 - 3875937 + g 72 -4.7 -4.59109 | overlap 3875922 3875926 3875936 CCTTGGAGGACTGCA CCGCC AGG GGCGA TTTTTCGGAAATCTC Dole_3233 3877813 - 3876779 - | ApbE family lipoprotein TERM 6123 3877785 - 3877749 - G 75 -8.6 -4.09685 | gap 1, overlap 3877715 3877716 TCGCACCCGGCAAAA GCCAGGCAGAGGCAGGC CGCG GCCAGCATCCACC-GGC CTGAATATTTTGTTA TERM 6124 3878176 - 3878157 - g 83 -5.6 -5.00616 | gap 1, overlap 3878158 3878159 3878161 GCTTTTCCCAAAAAA TGGACCGGG CGG CCCGG-CCT GTGGACGGCGCCCCC TERM 6125 3878388 - 3878414 + G 88 -10 -4.4648 | opp_overlap 3878378 3878377, overlap 3878389 ACAATGGCGTGATGG ACACGCCCATCG GCC CGGTGGGCGCGG TTTTGTGCTGGGAAT TERM 6126 3878389 - 3878413 + G 82 -13.5 -3.27406 | opp_overlap 3878378 3878377, overlap 3878388 CAATGGCGTGATGGA CACGCCCATCG GCC CGGTGGGCGCG GTTTTGTGCTGGGAA TERM 6127 3878584 - 3878554 - g 70 -2.4 -4.81249 | opp_overlap 3878576, overlap 3878546 3878572 3878575 GGTGAAAGCGAAAAA CCTGGCCATCAT GAAAGAG ACGCCGGCCCGG TTTGCCCGCCTCACC TERM 6128 3878595 - 3878634 + G 82 -8.7 -4.52589 | gap 3, opp_overlap 3878572 3878575, overlap 3878576 CCCGGTTTGCCCGCC TCACCGGC-T-GCCCG-GTG GTG CACGCGGCCCATGCCGGTGA TTTTGTGTGCAAAAC TERM 6129 3878659 - 3878649 - g 71 -8.2 -4.07687 | overlap 3878650 ATTTTGTGTGCAAAA CGCC CCT GGCG CCCGGCCTTGCCTAC Dole_3234 3878000 - 3878944 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 6130 3879356 - 3879372 + G 80 -2.2 -5.24129 | opp_overlap 3879344 CAACCGGCCCGGACA CCCG GAGCTATGA CGGG TTTTTTCTGACCACA TERM 6131 3879408 - 3879388 - g 100 -18.3 -2.78384 | opp_overlap 3879380 TTTTTTCTGACCACA CGGCCGGTG CCC CACCGGCCG GAGAGCATTGCCTTC Dole_3235 3878941 - 3879732 + | beta-lactamase domain-containing protein TERM 6132 3880041 - 3880057 + G 70 -2.1 -4.77165 | overlap 3880042 TGTAACATCGCTGAT GTGCCGG ATG CCTGCAA TTTTATTCTGCCGGC Dole_3236 3879729 - 3880391 + | siroheme synthase TERM 6133 3880609 - 3880627 + G 77 -8 -4.36914 | overlap 3880610 TCTACCGCTACGGAT TCGGCCTG CTG CTGGCCGG TTTTCTGGCGCACGG TERM 6134 3880717 - 3880739 + G 71 -11.2 -3.3062 | overlap 3880710 AGTCCCTCTCTCTGG CGGCCTGGTC CCT GGCCGGGCTG TTCGTGCTGTTTCAG Dole_3237 3880500 - 3881339 + | cytochrome c assembly protein TERM 6135 3881361 - 3881375 + G 77 -10 -3.86015 | opp_overlap 3881341 TCACAAACCGCCACT CGGCTT ATA AAGCCG TTTCTCCCAACACTA Dole_3238 3881336 - 3882652 + | glutamyl-tRNA reductase Dole_3239 3884548 - 3883103 - | sigma-54 dependent trancsriptional regulator TERM 6136 3883873 - 3883831 - G 87 -3.9 -5.47218 | gap 1, opp_overlap 3883837, overlap 3883832 TTTCATCTAAAAAAA TGGTGCCGCCGTGG-GCCAT TTCA AAGGCTCCCCGCCGGGACCG GATGGCGCCGGTAAA TERM 6137 3884137 - 3884121 - G 74 -6.5 -4.52589 | CTCTGGGAGATAAAA TCCCCCA GCT TGGGCGA AGCCTGGCCCCGGGC TERM 6138 3884208 - 3884220 + g 72 -4.8 -4.57569 | AACGTGGACTCAATG GCCT CGATC AGGC TTTTTCGGGAGATGC Dole_3240 3884882 - 3885403 + | hypothetical protein TERM 6139 3885724 - 3885735 + G 75 -5.8 -4.64766 | overlap 3885713 GGGAGCGCCTCTGGC CGCA GCAG TGCG TTTTTGACCTCTGGC TERM 6140 3885808 - 3885829 + G 100 -12.9 -4.77567 | overlap 3885809 TTTTTATCACCGGGG AGGCGGCGG AGTT CCGCCGCCC TTTTCTTCTGGCCCT TERM 6141 3885809 - 3885828 + G 89 -16.4 -3.45817 | overlap 3885808 TTTTATCACCGGGGA GGCGGCGG AGTT CCGCCGCC CTTTTCTTCTGGCCC TERM 6142 3886154 - 3886134 - g 91 -4.6 -5.63504 | overlap 3886136 AAGTCGAGAAAAAAA CTGGACCA GGAGA TGGCCCGG ATTGAGGCCCTGGGG TERM 6143 3886158 - 3886174 + G 80 -10.1 -4.07568 | GAGATGGCCCGGATT GAGGCCC TGG GGGTCTC TTTTCACCACGACGA TERM 6144 3886281 - 3886295 + G 83 -5.7 -5.00616 | TTTTTTGCCGCCTTT GTCGA CATGA TCGAC TTTTTTCAAAAACGG Dole_3241 3885660 - 3886595 + | hypothetical protein TERM 6145 3886952 - 3886971 + G 100 -15 -4.56597 | overlap 3886962 ACTGGATTCGACGCG CAGCGCCC GGCC GGGCGCTG TTTTTGACCGACCCG TERM 6146 3887024 - 3887008 - g 72 -5.7 -4.4267 | overlap 3887011 CGGCAAAAGGCAAAA GAGCCGG CAC CCGGTCC GGACGAGGAGGTGTG TERM 6147 3887293 - 3887307 + G 83 -5.6 -5.00616 | opp_overlap 3887293, overlap 3887295 CCGGTTTTTTCCAAA GCCGAC GCC GTCGCC TTTTTTGAGGCCCAC TERM 6148 3888096 - 3888078 - g 78 -6.6 -4.56597 | overlap 3888080 CTTTGCCCTTAAAAA TCCGGCTG ACC CGGCCGAA GAATGCCAGGCCCTG Dole_3242 3886846 - 3888144 + | hypothetical protein TERM 6149 3888339 - 3888349 + G 95 -2.4 -6.07627 | TTTTCCGCGAAGCTG CCCG ACC CCGG TTTTTTTTTCGCCGT TERM 6150 3888674 - 3888694 + G 70 -2.4 -4.83615 | GCGCAAGTTCGGCAT TCTGCCCG AACGC CTGGCCGA TTTTTATGAGACCTC TERM 6151 3888726 - 3888715 - g 72 -4.4 -4.65168 | opp_overlap 3888717 ATGAGACCTCAAAAA CATG CGGT CATG TCAACCTGGCGGGAT Dole_3243 3888141 - 3889403 + | Orn/DAP/Arg decarboxylase 2 Dole_3244 3889933 - 3890145 + | hypothetical protein TERM 6152 3890504 - 3890546 + G 80 -9.2 -4.12188 | gap 3 TTTCTGGGCTGCCCG TGGCG-GGCCGT-GCTG-CGG CTGG CCGGCGGCGACGGCAACGCCA TTTTGGGCCTGCTGG TERM 6153 3890661 - 3890677 + G 70 -4.3 -4.60487 | CGGGATGGATGCTGC CCCTGGT GAT GCTGGGG TTTTTCGCCCTGATG TERM 6154 3891041 - 3891065 + G 79 -5.6 -4.83615 | overlap 3891017 CTTGCCTTTGCCCTG GCCGGCGG ATGCCCGGG CCGCCAGC TTTTTCTGGCCGGTG TERM 6155 3891179 - 3891208 + G 73 -3.5 -4.81551 | gap 1, overlap 3891178 CCCGCCGGGCTTGGC CCCCACGG-CGTTG CCG CGGTGGTTGTGGGG TTTTTCGTCTGCCTG Dole_3245 3890168 - 3891259 + | hypothetical protein TERM 6156 3891432 - 3891401 - g 74 -6.4 -4.41494 | CACCTCCAAGGAAAA TGTATCCCGGGCCG CGAC CAGCCAGGGCTGCA CGGTGGTGGACGTGA Dole_3246 3891273 - 3891494 + | SirA family protein TERM 6157 3891598 - 3891570 - g 95 -6.6 -5.4833 | opp_overlap 3891591, overlap 3891574 TTATTCAAGAAAAAA GACATGTCCGCC AAAAA GGCGGCCACTTC CGGGGCGGACCGGGG TERM 6158 3891947 - 3891922 - g 86 -3.3 -5.64274 | gap 1 CCATTGAGAAAAAAA GCCGGA-CCATT GTC AATATCTCCGGC GGCGGTTGCCCGGAT Dole_3247 3891546 - 3892091 + | hypothetical protein Dole_3248 3892085 - 3892939 + | hypothetical protein TERM 6159 3893030 - 3893071 + F 83 -4.2 -5.47218 | opp_overlap 3893031 3893053, overlap 3893031 ATAATCCGGACAAGA TTGCTTCGCTTCGCTCGC AATGAC GCGTGCGACGGGTGGCAG TTTTTTTACGTGCCA TERM 6160 3893142 - 3893124 - f 100 -16 -3.09516 | CTTTGCACGAGGGAA GCCACGCC TGT GGCGTGGC AAGCCAGAGGCCAAG TERM 6161 3893161 - 3893177 + F 95 -12.3 -4.29953 | overlap 3893158 CCAGAGGCCAAGCTG TCACGCC TGC GGCGTGA TTCTTTTGGTACTTT TERM 6162 3894237 - 3894216 - g 70 -2.3 -4.82901 | gap 1, overlap 3894218 GGGTGCTTACAAAAA CA-GGGAG TTTCGCG CTCCCATG GTGCAAATCCAGCAG Dole_3249 3893485 - 3894435 + | selenide, water dikinase TERM 6163 3894938 - 3894958 + F 76 -8.3 -4.09685 | overlap 3894941 CACGAAAAAGGCTTC CAATCCGCA AAC TGCGAATTG TTTTGCCCGGTCAAG Dole_3250 3895478 - 3896830 + | transposase IS4 family protein TERM 6164 3897128 - 3897117 - f 70 -2.2 -4.88295 | AAATAAAGTGAAAAA CCAT ATTG ACGG CACGCTTTTTGAATA TERM 6165 3897224 - 3897212 - g 73 -3.5 -4.73388 | overlap 3897213 AACTTTGATCAAAAA TTTTT TGG AAAAA ACAAGCGGGCCGGGC TERM 6166 3897681 - 3897701 + G 81 -3.1 -5.27206 | ATGACCCGGTACTCG CAGCCGACG CAT CCCTGGCTG TTTTTGTTCTCTGTG Dole_3251 3897194 - 3898234 + | hypothetical protein TERM 6167 3898558 - 3898548 - g 70 -4.6 -4.48987 | GGTCTATAAGGAAAA CAGC GCG GCCG GCCAAAACACGACCA TERM 6168 3898663 - 3898634 - g 70 -4.1 -4.56597 | gap 1 CCCTTTTTGTAAAAA CCGCGGACGG-CAC AAC GCGTCCGGCAACGG CATCGGACTACACCC Dole_3252 3898252 - 3898755 + | hypothetical protein TERM 6169 3899507 - 3899518 + G 79 -5.8 -4.83615 | CCGATAACCCGGCAA CGGT TCAG ACCG TTTTTGTCGACGGTG Dole_3253 3898834 - 3899964 + | hypothetical protein TERM 6170 3900010 - 3900061 + G 100 -15.4 -3.86346 | gap 4, opp_overlap 3900007 3900010 3900012, overlap 3900016 ATGCGCATTAAAGGA CAGGC--GGCCCCGCC-TT-CCGGCA ATTT TGCCGGAAACGGCGGGGCTTTGCCTG TTTCTGCGCGCATGG TERM 6171 3900061 - 3900010 - g 74 -13.2 -2.96873 | gap 4, opp_overlap 3900010 3900016, overlap 3900007 3900012 ATGCGCATTAAAGGA CAGGC--GGCCCCGCC-TT-CCGGCA ATTT TGCCGGAAACGGCGGGGCTTTGCCTG TTTCTGCGCGCATGG TERM 6172 3900016 - 3900053 + G 100 -18.6 -3.83324 | gap 2, opp_overlap 3900007 3900012 3900010, overlap 3900010 ATTAAAGGACAGGCG GCCCCGCC-TT-CCGGCA ATTT TGCCGGAAACGGCGGGGC TTTGCCTGTTTCTGC TERM 6173 3900081 - 3900127 + G 81 -15.1 -2.64472 | gap 1, opp_overlap 3900092 3900106, overlap 3900078 3900077 TGCGCGCATGGCCGC TGTGCGGAAC-AGGGCTGCCGC GAAA GCGGCGGCCCTGGCCCCGCAAA TCCATTTAACGCGTC TERM 6174 3900115 - 3900092 - g 84 -15.2 -3.01712 | opp_overlap 3900081 3900078 3900077, overlap 3900106 CCGCTGTGCGGAACA GGGCTGCCGC GAAA GCGGCGGCCC TGGCCCCGCAAATCC TERM 6175 3900162 - 3900172 + G 74 -2.4 -5.00616 | opp_overlap 3900162 CGCGCTGATCATAAC GGCC CTG GTCC TTTTTTGCGCCACCG TERM 6176 3900329 - 3900311 - g 83 -5.8 -5.00616 | overlap 3900287 GCGCCGTTGAAAAAA GCGCGGAC ACG GACCGGGC CATGGAGGGGAACAA TERM 6177 3900964 - 3900935 - g 84 -7.1 -4.84359 | gap 1, overlap 3900937 CGATTGTCATAAAAA TTTCAGGCACCGGC CCG GCCGGCACC-GACA CCGAGGTGATTCTGC TERM 6178 3901357 - 3901370 + G 72 -9.5 -3.71917 | overlap 3901340 3901367 GGCAACCGGTATGAT CCGCC GGCG GGCGG TTTCCGGTTTCCCCT TERM 6179 3901755 - 3901731 - g 76 -12.1 -3.40522 | ATTTCGGTATCAGAA CGGCTCGTCCC GGC GGGACAAGGCG AAAACAGCCGATCCG TERM 6180 3901797 - 3901760 - g 88 -11.4 -4.21936 | gap 2, opp_overlap 3901759 3901762 3901786, overlap 3901762 GGGACAAGGCGAAAA CAGCCGATCCGGCCATCG CTTC CGACGGCCGGACC--CTG ACCTTTTCTATCGGC TERM 6181 3901799 - 3901762 - g 72 -9.2 -3.70689 | gap 2, opp_overlap 3901759 3901762 3901786, overlap 3901760 GACAAGGCGAAAACA GCC--GATCCGGCCATCG CTTC CGACGGCCGGACCCTGAC CTTTTCTATCGGCAC TERM 6182 3902659 - 3902643 - g 87 -7.9 -4.83169 | ACCGGCCCAGAAAAA CCAGCGG ACC CCGGTGG TGGAAAGCCTTCTGG TERM 6183 3902797 - 3902757 - g 71 -6.9 -4.21275 | gap 2 GCAACTGACCGAAAA CGACAAGGAACAGGTCCGC GCCCT GCGG-CA-GTCCCTTGCCG GCCGGCGGATCAAAC Dole_3254 3899980 - 3906336 + | hypothetical protein TERM 6184 3906510 - 3906553 + G 87 -15.3 -3.36492 | gap 1 TTTGTGGGTACCGGC GGGTCCCTTCG-CACCCGGC CCAAT GCCGGGTGGTGGGCGGACCC TTGTAGAATTACAAC TERM 6185 3907490 - 3907509 + G 70 -4.2 -4.66163 | opp_overlap 3907492, overlap 3907494 CTGGGCCGTGGACAC CAGCGGTG CGCC CACCATTG TTTTTACCTACGACT Dole_3255 3906336 - 3908174 + | hypothetical protein Dole_3256 3910615 - 3908207 - | PAS/PAC sensor hybrid histidine kinase TERM 6186 3908603 - 3908620 + g 90 -3.3 -5.75538 | gap 1, opp_overlap 3908582, overlap 3908602 3908601 3908607 TGCCCCGCCCTTTAT G-GCCGGC GCG GCCGCCTC TTTTTCTTTTTTCAA TERM 6187 3908607 - 3908618 + g 76 -7.2 -4.48934 | opp_overlap 3908582, overlap 3908602 3908601 3908603 CCGCCCTTTATGGCC GGCG CGGC CGCC TCTTTTTCTTTTTTC TERM 6188 3908683 - 3908672 - G 100 -3.6 -5.85244 | opp_overlap 3908675 3908676, overlap 3908675 3908676 AAGGAAAATAAAAAA CGAG GTGC CCCG CCCTTTTTCGCTGGT TERM 6189 3909170 - 3909185 + g 79 -6.8 -4.56597 | TCCCAGAAGATTGCG GGTCAG GGTG CTGGCC TTTTTCACCGACCGG TERM 6190 3909716 - 3909698 - G 81 -11.6 -3.8766 | GTAGATCAGATCAAA GGAGGCGG CCA CCGCCACC TTGAGCCGCTCCTCG TERM 6191 3909834 - 3909854 + g 76 -3.2 -5.00616 | gap 1, opp_overlap 3909834, overlap 3909835 CGCCGTGCCCAGACA CGGG-CGTT AAAA ACCGTCCCG TTTTTTCGACGCAGA TERM 6192 3910644 - 3910668 + r 74 -6.4 -4.33153 | gap 1, overlap 3910654 CTTGCACCGGTCGTA CGTACCG-GCA GGAA TGCACGGTCCG TTTCTTCCTGTTACG Dole_3257 3911755 - 3910679 - | response regulator receiver modulated metal dependent phosphohydrolase TERM 6193 3911732 - 3911744 + g 86 -3.4 -5.61824 | CTCATCATCCACCAG CAAC AGACG GTTG TTTTTTTCCATTTTA TERM 6194 3911793 - 3911814 + r 75 -10.1 -3.32343 | overlap 3911794 AATCGCTATTCATTG CTCCCGCTG GCAT CAGCGGGAA TTGTCACCGTGTAAA TERM 6195 3911794 - 3911813 + r 84 -13.6 -2.59191 | overlap 3911793 ATCGCTATTCATTGC TCCCGCTG GCAT CAGCGGGA ATTGTCACCGTGTAA Dole_3258 3912625 - 3911783 - | PAS/PAC sensor signal transduction histidine kinase TERM 6196 3911849 - 3911833 - G 76 -3.5 -5.02074 | TCACCGTGTAAAAAA CGTTCCG GCC CGGCCCG TCCACCACAACATTC TERM 6197 3912067 - 3912053 - G 85 -11.4 -4.00038 | CAGCAGCACCAGAAA CCCCTG TAC CAGGGG CTGTGAAGAAACGGC TERM 6198 3912110 - 3912094 - G 77 -2.1 -5.06414 | opp_overlap 3912095, overlap 3912095 CGGCCTCAAGAAAAA GCGGTTC TCC GTACTGC CGGTCAACCGTTATC TERM 6199 3912816 - 3912778 - R 100 -21 -3.30771 | overlap 3912780 3912781 3912783 TCAGACCCCTGAGAA CAGCACCGGCAGGCACGC TGG GCGTGCCTGCCGGTGGAA TAGAGGTTGACCTCG TERM 6200 3912814 - 3912780 - R 100 -25.8 -3.22102 | overlap 3912778 3912781 3912783 AGACCCCTGAGAACA GCACCGGCAGGCACGC TGG GCGTGCCTGCCGGTGG AATAGAGGTTGACCT TERM 6201 3912813 - 3912781 - R 100 -29.3 -2.5294 | overlap 3912780 3912778 3912783 GACCCCTGAGAACAG CACCGGCAGGCACGC TGG GCGTGCCTGCCGGTG GAATAGAGGTTGACC TERM 6202 3912811 - 3912783 - R 100 -26.1 -2.80074 | overlap 3912781 3912780 3912778 CCCCTGAGAACAGCA CCGGCAGGCACGC TGG GCGTGCCTGCCGG TGGAATAGAGGTTGA Dole_3259 3914939 - 3912843 - | hypothetical protein TERM 6203 3914350 - 3914335 - G 87 -4 -5.40072 | gap 1, overlap 3914336 3914337 CCCGTGGCAAAAAAA GCCGACA CGC TGTCG-C TCGAAATAGAAGGAT TERM 6204 3915213 - 3915197 - R 77 -2.9 -5.29782 | overlap 3915198 GACAGGCAGAAAAAA GCCTCTC GCA AAGAGGA GAAAAACAAAACAGC Dole_3260 3915855 - 3915364 - | hypothetical protein Dole_3261 3917225 - 3915939 - | hypothetical protein TERM 6205 3917161 - 3917183 + g 73 -12.6 -2.75039 | CACCATCCTGTAATT CCGGTCGCCG ATG CGCCGGCCGG TCCTTCGAATCTATC TERM 6206 3917469 - 3917415 - R 100 -11.5 -5.15969 | gap 2, opp_overlap 3917422 3917422 3917423 3917423, overlap 3917417 3917418 GGGCAATTGAAAAAA GAC-GGCGC-GTTCTGCCGGACAGGAC TTT GTTCTGTCCGGCAGAACAGTTCCTGTG CCGGACAACATTTCC TERM 6207 3917466 - 3917417 - R 100 -14.3 -4.20888 | gap 1, opp_overlap 3917422 3917422 3917423 3917423, overlap 3917415 3917418 GCAATTGAAAAAAGA CGGCGC-GTTCTGCCGGACAGGAC TTT GTTCTGTCCGGCAGAACAGTTCCT GTGCCGGACAACATT TERM 6208 3917465 - 3917418 - R 100 -17.8 -3.11448 | gap 1, opp_overlap 3917422 3917422 3917423 3917423, overlap 3917417 3917415 CAATTGAAAAAAGAC GGCGC-GTTCTGCCGGACAGGAC TTT GTTCTGTCCGGCAGAACAGTTCC TGTGCCGGACAACAT TERM 6209 3917422 - 3917461 + r 100 -22.4 -3.25823 | gap 1, opp_overlap 3917418 3917417 3917415, overlap 3917422 3917423 3917423 TGAAAAAAGACGGCG C-GTTCTGCCGGACAGGAC TTT GTTCTGTCCGGCAGAACAG TTCCTGTGCCGGACA TERM 6210 3917422 - 3917460 + r 100 -22.6 -2.55351 | opp_overlap 3917418 3917417 3917415, overlap 3917422 3917423 3917423 TGAAAAAAGACGGCG CGTTCTGCCGGACAGGAC TTT GTTCTGTCCGGCAGAACA GTTCCTGTGCCGGAC Dole_3262 3919150 - 3917723 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 6211 3918305 - 3918322 + g 70 -4.1 -4.56597 | GGCGGCAATCAGCCG GAAATCG CAAT CGATCTC TTTTTCCAGGCCCAC Dole_3263 3921053 - 3919134 - | PAS/PAC sensor hybrid histidine kinase TERM 6212 3920383 - 3920355 - G 100 -8.9 -5.36965 | gap 1, opp_overlap 3920358, overlap 3920358 CAACACCACAAAAAA GAG-CAGCACGG TTTTTT CCGTGCCGTCTC TGCACGTCACCACAT TERM 6213 3921855 - 3921900 + G 76 -11.7 -3.3782 | gap 1 CCGCCGCTGGCAAGG GGCCG-TGCTGGCCGCGGCGGC ATG GCCGTCGGTGCTGACAGCGGCC TTGATTGCGTCCCTG TERM 6214 3922058 - 3922071 + G 72 -4.5 -4.56597 | CGCTGCTTCACGCCA TACCG GCCC CGGTG TTTTTCAAGGACAGA TERM 6215 3924308 - 3924286 - g 75 -5.5 -4.70879 | gap 1, overlap 3924277 GCCAAAGGGCAAAAA GCCCCGGCCG CCAG CGGC-GGAAC CGTGCTGGTGGTGGA TERM 6216 3924523 - 3924513 - g 70 -2.4 -4.86773 | opp_overlap 3924520 GAAAACGATGAAAAA GCGG TTT CCGG ATCTTCGGGTGCTCT Dole_3264 3921262 - 3924666 + | PAS/PAC sensor hybrid histidine kinase TERM 6217 3924736 - 3924771 + G 95 -14 -4.28049 | gap 1 GCGGTCTGTCTGGCC CCGGCC-CTGCTGGCGA TCA TTGCCGGCGGCGGCTGG TTTTACGATTTTCAG TERM 6218 3926353 - 3926329 - g 75 -4.2 -4.72986 | opp_overlap 3926331 3926337 3926344, overlap 3926331 GATGTGTATGAAAAA GAGTACCGCC GGGTG GACGGCACTG TCTTTCCGGTTGAGT TERM 6219 3926659 - 3926673 + G 75 -5.7 -4.57569 | GACCTCGTTGCGACC GCCAT GACCG ATGGC TTTTTAAGCCAGTCG TERM 6220 3926858 - 3926848 - g 70 -4 -4.59773 | GCCGAGGCCGAAAAA GAAA GGC TTTC CGCCCAGCTTATGCA TERM 6221 3927080 - 3927061 - g 83 -9.2 -4.36649 | overlap 3927058 GAGATCACAAAACAA CTGCTGGC CTTT GCCCGCAG GCAGATCATCGTGCC Dole_3265 3924682 - 3928002 + | PAS/PAC sensor hybrid histidine kinase TERM 6222 3929634 - 3929620 - g 75 -9.2 -3.79678 | AATTCTGGATAAGAA CGGCGA ATA CCGCCG CATTCAGGAAAAGTG TERM 6223 3929687 - 3929669 - g 73 -3.1 -4.72272 | gap 1 GGCGTTTATCAAAAA CAGGC-CA TTGA CGCGCCTG CCGTTTTTAAATACG TERM 6224 3929925 - 3929949 + G 72 -6.4 -4.36914 | opp_overlap 3929920, overlap 3929927 3929928 TTTTCGGAAACGATG TGATCGGCAG ACCGG CTGCCGACTA TTTTGTGGGAGAGCA TERM 6225 3930567 - 3930546 - g 78 -4.3 -5.00616 | CGCTGCTTGAAAAAA TGGATGCGC TTCA GCGGTTCCA CGACACTGTTGTGGA Dole_3266 3928184 - 3930676 + | putative PAS/PAC sensor protein TERM 6226 3930786 - 3930776 - g 77 -2.4 -5.1244 | opp_overlap 3930777 3930778, overlap 3930778 TCATGAACATAAAAA CCCG GTA CGCG GTTCCGCTGTTTTGC TERM 6227 3930807 - 3930834 + G 72 -9.8 -3.72765 | gap 1, overlap 3930824 GCTGTTTTGCGTGCT GGTGTGCGCCGGC CTG GCCGGCA-ACGCC TTTCCGGTTTCCATT TERM 6228 3931899 - 3931914 + G 70 -11.8 -2.74322 | overlap 3931898 CCTTGCGTCATTTTC CCGGCC CGGG GGCCGG CTTTCCGCCCTTGAC TERM 6229 3933088 - 3933102 + G 74 -11.4 -3.53012 | opp_overlap 3933086 TCTTCCGATATCACG GGCCAG CTT CTGGCC TTTGCCCGGCGCCAG TERM 6230 3934216 - 3934200 - g 89 -2.1 -5.67063 | opp_overlap 3934200, overlap 3934202 CCCAGGAGAAAAAAA GATGGCG CTT CGCAAAC ATTCATCATTCATCA Dole_3267 3930742 - 3934284 + | PAS/PAC sensor hybrid histidine kinase TERM 6231 3935084 - 3935070 - g 72 -4.9 -4.56597 | CCGTTTCTTGAAAAA GCCAG GAACT CCGGC CAGACGGTTAACACC TERM 6232 3935281 - 3935266 - g 77 -11.8 -3.53563 | opp_overlap 3935279 AGATTGCCGGGGAAA CCGCCG GATT CGGCGG CTGGGACGTGGATTT TERM 6233 3936991 - 3936949 - g 72 -6.1 -4.30576 | gap 1, opp_overlap 3936948 TTTTTACCACCAAAA CCGTAGGCAAAGGCACGGGC CTGG GCCTG-GCCACGGTCTACGG CATTGTCCGGCAGAA Dole_3268 3934266 - 3937505 + | PAS/PAC sensor hybrid histidine kinase TERM 6234 3937851 - 3937833 - g 71 -7.3 -4.15748 | opp_overlap 3937832 3937833 CGACCTGAAAAAAGA GGCGGAC GAGCT GACCGCC ATTCTCGTTGCAAGC Dole_3269 3937669 - 3937905 + | hypothetical protein TERM 6235 3938337 - 3938351 + G 71 -10 -3.53012 | opp_overlap 3938328 3938325 AAGGCAGCGGCATCC GGTCCA TCG TGGACC TTTCCGGAAAACGGG Dole_3270 3937925 - 3939622 + | histidine kinase TERM 6236 3939894 - 3939882 - g 72 -6.2 -4.31698 | GGAAATCAAAAAACA CGCC GAGCT GGCG AATGTGCCGATCATC Dole_3271 3939670 - 3940032 + | response regulator receiver protein TERM 6237 3941288 - 3941306 + G 78 -8.8 -4.16121 | overlap 3941303 GAGGAAAAATTTCCC GCCGATTC CCT GAACCGGC TTTATGCTGTTTTTG TERM 6238 3941719 - 3941707 - g 87 -7.7 -4.7416 | opp_overlap 3941698 CGAAAACGCCAAAAA GGTGT TTC ACACC TTCAACCAGGTGTTC TERM 6239 3941766 - 3941748 - g 83 -8.2 -4.6902 | TCACAAGCGGAAAAA CAGCCAAA GCC TTTGACTG GGAACTGATTCGAAA Dole_3272 3940172 - 3943060 + | PAS/PAC sensor hybrid histidine kinase