TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.377481 %AT, 1950318 nt, 17750 terms. Intergenic: 0.460143 %AT, H2T: 343078 nt, 2719 terms; T2T: 53819 nt, 1116 terms; H2H: 70747 nt, 1325 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|169830219|ref|NC_010424.1| Candidatus Desulforudis audaxviator MP104C, complete genome (length 2349476) Daud_0001 103 - 1440 + | chromosomal replication initiator protein DnaA Daud_0002 1579 - 2748 + | DNA polymerase III, beta subunit Daud_0003 2761 - 3843 + | DNA replication and repair protein RecF Daud_0004 3847 - 4107 + | hypothetical protein TERM 1 4220 - 4206 - g 82 -5.6 -4.82901 | TGGTTTGGACAAAAA CGGTTC GGG GTACCG GGCCGAGGATATTCA TERM 2 5523 - 5542 + G 73 -8.6 -4.07568 | gap 1 GGAATTCCAGGCGAT TCT-GCCGC TGC GCGGCAAGA TTTTGAACGCCGAAA TERM 3 6000 - 5964 - g 72 -8 -4.11216 | gap 1 CCTGGACCCGGAAAA CCGGACGATGCTCCAGG TGAC CCTGGAGGAT-GCCCTG GCGGCCGAGCAGCTT Daud_0005 4195 - 6102 + | DNA gyrase, B subunit TERM 4 6322 - 6310 - g 76 -9.1 -4.07568 | GGCGGTCCTGGAAAA GGTGC GGG GCACC GGCGTGCAGGCGGTG Daud_0006 6092 - 6688 + | orotate phosphoribosyltransferase Daud_0007 7024 - 7293 + | hypothetical protein TERM 5 7284 - 7298 + F 73 -5.6 -4.56597 | overlap 7272 CAAGCGGAATGGGGA CCGCTT TTA GGGCGG TTTTTCACGGCAGAG TERM 6 8732 - 8703 - g 78 -7.1 -4.65895 | gap 1, opp_overlap 8688 8687, overlap 8706 GGCCTGAGCGAAAAA CAGGCGCA-GGCCA TTC TGGATATGCGCCTG CAGCGGCTGACCGCC Daud_0008 7452 - 9890 + | DNA gyrase, A subunit TERM 7 9940 - 9961 + F 82 -5 -5.10933 | opp_overlap 9941, overlap 9936 9941 CGGGATACCCTGGAA ACGGCCCT TGCAGC GGGGCCGG TTTTCTTTTGGGTGC Daud_0009 10065 - 10949 + | pyridoxine biosynthesis protein TERM 8 11069 - 11045 - g 81 -7.9 -4.39166 | gap 1, overlap 11046 GTCGAGATACGAAAA CCCGGGCAGT TAGGTG ACTGCC-GGG CGCTGATCATCCCCG TERM 9 11153 - 11171 + G 72 -7.3 -4.19817 | overlap 11154 CCGGTGCGCCGGTTC GGGGCCG AAGGC CGGCCCG TTTTCGGTACCTGCG Daud_0010 10949 - 11518 + | SNO glutamine amidotransferase TERM 10 11783 - 11811 + F 91 -7.4 -4.90321 | gap 1, overlap 11774 GCAACGCGGGAGTAT CCTCTCGTCCCTT TCAC GAGGG-CGGGGGG TTTTCTATTATTTTT Daud_0011 11897 - 13051 + | aminotransferase, class V TERM 11 13958 - 13940 - g 74 -11.7 -3.39895 | TGGCCGAGGAAGTAA TCGCCGC CCTAC GCGGCGA ACTGGTGAAAAACGC TERM 12 13989 - 13971 - g 72 -4.4 -4.59853 | opp_overlap 13974 CGAACTGGTGAAAAA CGCCGTGA ACA TCCCGTCG CTTAAGCCCGACATC Daud_0012 13048 - 14628 + | D-3-phosphoglycerate dehydrogenase TERM 13 14860 - 14845 - g 75 -11.8 -3.61398 | overlap 14829 CGCCCGCCTGAAGAA GGCCGG CGAG CCGGCC GAAGAGCTGATTGCG Daud_0013 14657 - 15934 + | seryl-tRNA synthetase TERM 14 16022 - 16039 + F 100 -14.1 -4.64676 | GGCTGAATGCCTTGA CCGGCCC GACA GGGCCGG TTTTATTGACACTGC TERM 15 16852 - 16829 - f 74 -10.4 -3.48024 | gap 1, opp_overlap 16809, overlap 16827 16832 16845 GCTCAGGAGGAAAGA GCA-GCGGTTT CCT AAACCGCGTGC CGGGGGTTCGAGTCC Daud_0014 16973 - 17443 + | CMP/dCMP deaminase, zinc-binding Daud_0015 20099 - 17649 - | Alpha-glucosidase TERM 16 18950 - 18934 - G 72 -7.9 -4.17491 | AGGAAATCGGGAAAA TGGCAGG GTC CCGGCCA GACCACCCGGGAGAT TERM 17 19938 - 19986 + g 75 -13.8 -3.02461 | gap 1 GTTGAAGGGGCCGGC CGTGAT-CCTGCCGTGGCGGTTC ACCA GGACCGCCACGCCGGGCGCCGCG TGTTCGACGCGGTTC TERM 18 20690 - 20672 - g 81 -3.8 -5.09895 | GAGGTATGCAAAAAA TGTCCCCC TAC AAGAGACA GAATAATGGTGTCCA Daud_0016 20671 - 21345 + | hypothetical protein TERM 19 21354 - 21380 + F 100 -14.5 -4.65895 | GAAATGATTTAGCAG GCAGGCTTGAG CCCGT CTCAGGCCTGC TTTTTCGGTCAAAAG Daud_0017 21599 - 22210 + | hypothetical protein Daud_0018 23461 - 22313 - | UDP-N-acetylglucosamine 2-epimerase TERM 20 22345 - 22356 + g 71 -5.8 -4.28371 | TGTGCCACACTTTTT TGGC ATTG GCCA TTTCTCTTAATCTTT Daud_0019 24524 - 23472 - | N-acylneuraminate-9-phosphate synthase TERM 21 24826 - 24843 + G 75 -4.1 -4.72272 | opp_overlap 24826 CTTTGAAGGAAGCGA CCAGG GGTATGGA CCTGG TTTTTCATACAGCCG Daud_0020 24564 - 25625 + | polysaccharide biosynthesis protein CapD Daud_0021 25618 - 26319 + | acylneuraminate cytidylyltransferase TERM 22 26759 - 26786 + G 76 -5.5 -4.60487 | gap 1 CGGGGTAAAGGCCTG GGTCAACTGCCC CTTGC GGGC-GATGGCC TTTTTCAAGCTGCTG TERM 23 26870 - 26891 + G 75 -3.8 -4.72007 | gap 1, opp_overlap 26870 GGGCCTGGGATGTAA CAGCATCCA CCACC TGGAT-CTG TTTGTTTTCCTGAGC Daud_0022 26316 - 27353 + | oxidoreductase domain-containing protein TERM 24 27815 - 27829 + G 91 -2.8 -5.40072 | TGGTTATTCTATGGT CCTC CCGGGAA GAGG TTTTTTTGCCCGACC Daud_0023 27382 - 28917 + | hypothetical protein TERM 25 29922 - 29910 - g 75 -4.1 -4.79756 | TACACAACCCAAAAA CTTCC GGA AGAAG TCAATCGTGCTGTGG Daud_0024 28947 - 30455 + | hypothetical protein TERM 26 30919 - 30930 + G 82 -5.8 -4.90525 | ATAGCCGAGGACGGG GGAG TTCG CTCC TTTTCTTTCGAGTTC TERM 27 31016 - 31002 - g 85 -3.5 -5.28831 | overlap 31003 AGCAATAAAAGAAAA CTGGC TGCTC GCCAA CTCCACGCACGTCAT TERM 28 31112 - 31153 + G 76 -5.7 -4.65895 | gap 1, opp_overlap 31094, overlap 31105 CATGGCACCCGGCAG GGGCGGTCTTCGCCGGTGCC GGT GTCACCT-CGAAGGGAGCCC TTTTTACCTGCCGGG Daud_0025 30445 - 31446 + | oxidoreductase domain-containing protein Daud_0026 31450 - 32919 + | hypothetical protein TERM 29 32999 - 33016 + G 83 -4.7 -5.06052 | overlap 33000 TGTCGATATTTTTAA TCGCCGC GGCA GAGGCGG TTTTGTGTTTTTTGA Daud_0027 32925 - 33578 + | hexapaptide repeat-containing transferase Daud_0028 34820 - 33609 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 30 33981 - 33997 + g 100 -15.1 -5.00616 | CCGTTCGGTCAGGAT GGCGGCG TTC CGCCGCC TTTTTTCCACCCAGG TERM 31 34986 - 35012 + r 95 -10.9 -4.66609 | GATATGATTCAGCAG GCAGGTTTGAG CCCGT CTCAGGCCTGC TTTTTCGCTCAAATC Daud_0029 36725 - 35052 - | hypothetical protein TERM 32 36929 - 36907 - H 100 -13.4 -4.1721 | overlap 36908 AGTGAGACCTCAAAA CGGCTTCCCC TGA GGGGAAGCCC TCCCCGCCAAAGGAG TERM 33 36928 - 36908 - H 100 -16.9 -3.09844 | overlap 36907 GTGAGACCTCAAAAC GGCTTCCCC TGA GGGGAAGCC CTCCCCGCCAAAGGA TERM 34 38222 - 38210 - g 74 -4.8 -4.67353 | CGACCTACTGAAAAA GGCT GTCGG AGCC GAGGCAATCCAACTG Daud_0030 36954 - 38372 + | hypothetical protein TERM 35 38931 - 38913 - f 75 -11 -3.40403 | opp_overlap 38913 CTGCTTTGATTAGAA GAGGTGGC AAA ACCACCTC TTTCCTAATTTGGTG TERM 36 38913 - 38931 + F 80 -10.3 -3.90082 | opp_overlap 38913 CTGCTTTGATTAGAA GAGGTGG CAAAA CCACCTC TTTCCTAATTTGGTG Daud_0031 39142 - 40485 + | DNA polymerase III, subunits gamma and tau Daud_0032 40503 - 40811 + | hypothetical protein Daud_0033 40842 - 41438 + | recombination protein RecR Daud_0034 41493 - 41762 + | SigmaK-factor processing regulatory BofA TERM 37 41791 - 41811 + F 100 -11.2 -5.33405 | GGCGTTTGCCGTGCG GCCTCTTC AGGGC GAAGAGGC TTTTTGTTTGGTGAG TERM 38 42245 - 42268 + G 78 -6.6 -4.56597 | overlap 42246 CCGGTATACGTCACG CCCCCCTTCG ACGC CGAATGGGGC TTTTTCCGGCCCCCG Daud_0035 41822 - 43309 + | Orn/Lys/Arg decarboxylase, major region TERM 39 43305 - 43287 - f 74 -7.4 -4.07687 | ACCCGGGCTTGAAAA CCATCATG GTG CACGACGG GTGATGCGGGTGAGC Daud_0036 43315 - 43980 + | dTMP kinase TERM 40 44116 - 44104 - gf 74 -4.7 -4.63218 | opp_overlap 44107, overlap 44105 GTGTCGGCAAGAAAA GCCTG GCC CGGGC GCTCGCCCAAGCCCT Daud_0037 43986 - 45002 + | DNA polymerase III, delta prime subunit Daud_0038 44971 - 45783 + | PSP1 domain-containing protein TERM 41 46299 - 46316 + G 74 -4.7 -4.66537 | overlap 46296 CGCCCTGGTTGTTTC CGGCCTG CGGA CGGACCG TTTTGTGTTCGAAGG Daud_0039 45922 - 46770 + | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 42 46799 - 46771 - T 72 -12.4 -2.64274 | opp_overlap 46768 46775, overlap 46767 46768 ACGCCCGGAAAGTGA GTGAGAGGCCGC TTCTT GTGGCCTCCCAC ACCATATTCAGCTAT TERM 43 46818 - 46834 + T 75 -5.8 -4.59109 | overlap 46815 46814 ATATTCAGCTATCCC GCCTAC ATGGC GTGGGC TTTTTGGAACATCTC Daud_0040 47074 - 46820 - | AbrB family transcriptional regulator TERM 44 47135 - 47124 - H 79 -3 -5.22481 | CAGAAAGAAACAAAA TTAC GCAA GTAA ATGGTACCAAGCATT TERM 45 48793 - 48804 + G 72 -7.2 -4.10657 | overlap 48772 GCACGCGCATTGCGC GCGG GGCG CCGC TTTTCCCACGTGTCG Daud_0041 47283 - 48833 + | methionyl-tRNA synthetase TERM 46 49302 - 49323 + G 74 -9.3 -3.87815 | GCACTGTTTTGGCGG GGACTGGGC CGCG GCCCGGGCC TTTCTGGACCTGGGC Daud_0042 48835 - 49620 + | TatD family hydrolase TERM 47 49642 - 49617 - f 72 -11.3 -3.02293 | gap 1, opp_overlap 49624 49629 49633, overlap 49624 TGAAAGTCAAAGAAG GTAAAAAGGGGC CTG GCCCCTTTTT-C GGGGAGGGGTGAGTT TERM 48 49624 - 49636 + F 95 -10.5 -4.56597 | opp_overlap 49624 49617, overlap 49629 49633 CAAAGAAGGTAAAAA GGGGC CTG GCCCC TTTTTCGGGGAGGGG TERM 49 49636 - 49624 - f 100 -10.5 -4.8384 | opp_overlap 49624 49629 49633, overlap 49617 CAAAGAAGGTAAAAA GGGGC CTG GCCCC TTTTTCGGGGAGGGG TERM 50 49821 - 49863 + G 74 -5.5 -4.52589 | gap 2, opp_overlap 49818 49848, overlap 49848 GTGAACTGAAAGCGG CCGCCCGACTGGAAGGCCTGG AGA TCAGGCC-TCTGGG-GGCCGG TTTTGTGTACCCGGG Daud_0043 49661 - 50191 + | cob(I)alamin adenosyltransferase TERM 51 51007 - 50987 - g 78 -3.1 -5.00616 | overlap 51004 GCCGGCTGGAAAAAA GCGAGGTGG TGG CCAAACCGC AGAACCAGGTCCTGC Daud_0044 50323 - 51339 + | 3D domain-containing protein TERM 52 51339 - 51354 + F 100 -9 -5.60993 | GTTCATTCTCGAGTA GGGCTT TTAA AAGCCC TTTTTTTATGCCCGG Daud_0045 51389 - 52288 + | dimethyladenosine transferase Daud_0046 52330 - 52803 + | hypothetical protein Daud_0047 53755 - 52937 - | glycosyl transferase family protein TERM 53 53674 - 53726 + g 83 -11.9 -4.09243 | opp_overlap 53673 CGGGCAGCACCAGAT CGAGGGGGAGGGCCTGGATACTGTC AAG GACGGCATTCAGGCGATCAGCCTCG TTTTGCACGGGTATC Daud_0048 53880 - 54740 + | peptidase U57, YabG Daud_0049 54845 - 55240 + | hypothetical protein TERM 54 55802 - 55825 + F 100 -13.2 -4.64861 | opp_overlap 55805 TAACCGCGGTTTGAA TGACCACCGG TCCA CCGGTGGTTA TTTGTTTTCGGGCAG TERM 55 55822 - 55805 - f 76 -12.7 -2.70932 | opp_overlap 55802 CCGCGGTTTGAATGA CCACCGG TCCA CCGGTGG TTATTTGTTTTCGGG Daud_0050 55899 - 56186 + | hypothetical protein Daud_0051 56360 - 57262 + | Allergen V5/Tpx-1 family protein TERM 56 57369 - 57420 + F 80 -5.4 -4.83615 | gap 2 TGATCAGCACTCACA CTTCCTCCTTTCAGGCCATATATT TTTGGT AGCAAATGGC--GAAAGGAGGAAG TTTTTGTGACCCATA TERM 57 57805 - 57837 + G 83 -4.7 -5.08601 | overlap 57806 57807 TTGATCCCCGTGATT CCCGCCGGATTGTCG TGA CGATGATCCTGCGCA TTTTTGTTAAAGTGG Daud_0052 57426 - 58871 + | hypothetical protein TERM 58 58922 - 58971 + F 73 -5.2 -4.67982 | gap 2 GACCGGCCGCTCACA CTTCCTCCTGGGAGGCATATATTG ATAA CAA-ATATGCCGAA-AGGAGGAAG TTTTGTTGAGTCAAC Daud_0053 58974 - 60611 + | peptidoglycan-binding LysM TERM 59 60627 - 60646 + T 100 -10.8 -5.63504 | opp_overlap 60620 60627 TGATGATATTGAAAA GCTGCTTT TCAA AAAGCAGC TTTTTTTATGAACTT TERM 60 60646 - 60627 - T 90 -10.8 -4.24948 | opp_overlap 60627, overlap 60620 TGATGATATTGAAAA GCTGCTTT TCAA AAAGCAGC TTTTTTTATGAACTT Daud_0054 61261 - 60662 - | hypothetical protein Daud_0056 61602 - 62048 + | hypothetical protein Daud_0057 62744 - 62037 - | zinc/iron permease TERM 61 62492 - 62472 - G 72 -4.5 -4.56597 | opp_overlap 62479 62483, overlap 62473 62474 GCCCGTCTTGAAAAA CCCGGACCG TGA CGGGCCGAC CACGGCGGCCAGCGT TERM 62 63231 - 63264 + G 88 -3.8 -5.37345 | gap 2, overlap 63228 TCTTGAGACGTTACT CGGC-C-TCGCGGCCG AACT CGGTTCCGATGTGCCG TTTTTTCTGGTTGGG Daud_0058 62797 - 63717 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 63 63791 - 63773 - f 76 -10.2 -3.61902 | opp_overlap 63788 63790, overlap 63774 CGTTACGAGAGAGAA GGCGCCGA TAG TCGGCGCT GGGCGGCCCGGTGTC TERM 64 63790 - 63774 - f 79 -13.7 -2.7682 | opp_overlap 63788, overlap 63773 GTTACGAGAGAGAAG GCGCCGA TAG TCGGCGC TGGGCGGCCCGGTGT Daud_0059 63849 - 64538 + | GntR family transcriptional regulator TERM 65 64968 - 64986 + G 74 -12.4 -3.53012 | GCGGCGTACCTACGT GCGGCTGT CCG ACGGCCGC TTTACAGGGGGGAAC Daud_0060 64531 - 65292 + | hypothetical protein Daud_0061 65774 - 65355 - | hypothetical protein Daud_0062 66052 - 65768 - | prevent-host-death family protein TERM 66 66065 - 66083 + r 100 -10.4 -5.01823 | CACGGTGCCACTCCT TGTAACCA CTG TGGTTACA TTTTATTATTATTGT TERM 67 66180 - 66136 - R 86 -10.2 -4.14511 | gap 1, opp_overlap 66143 66144 66145, overlap 66141 66143 66145 66165 AAGGGGACGGCAAAA CAAAATACACCCGGCACTCGA GGAG TTAAGTGCCGGGCAT-TTTTG ACCGACGACTGACGA TERM 68 66176 - 66141 - R 86 -6.8 -5.09259 | opp_overlap 66143 66144 66145, overlap 66136 66143 66145 66165 GACGGCAAAACAAAA TACACCCGGCACTCGA GGAG TTAAGTGCCGGGCATT TTTGACCGACGACTG TERM 69 66174 - 66143 - R 80 -9.4 -4.16397 | opp_overlap 66143 66144 66145, overlap 66141 66136 66145 66165 CGGCAAAACAAAATA CACCCGGCACTCGA GGAG TTAAGTGCCGGGCA TTTTTGACCGACGAC TERM 70 66143 - 66174 + r 73 -5 -4.56597 | opp_overlap 66143 66141 66136 66145 66165, overlap 66144 66145 CGGCAAAACAAAATA CACCCGGCACTCGA GGAG TTAAGTGCCGGGCA TTTTTGACCGACGAC TERM 71 66145 - 66172 + r 72 -12 -2.60032 | opp_overlap 66143 66141 66136 66145 66165, overlap 66144 66143 GCAAAACAAAATACA CCCGGCACTCGA GGAG TTAAGTGCCGGG CATTTTTGACCGACG TERM 72 66172 - 66145 - R 83 -12 -3.66251 | opp_overlap 66145 66144 66143, overlap 66143 66141 66136 66165 GCAAAACAAAATACA CCCGGCACTCGA GGAG TTAAGTGCCGGG CATTTTTGACCGACG Daud_0063 66420 - 66211 - | SirA family protein Daud_0064 67501 - 66413 - | hypothetical protein Daud_0065 68660 - 67770 - | LysR family transcriptional regulator TERM 73 68690 - 68700 + H 91 -2.6 -5.80727 | TTGACTAATTGTTAT TAAT TAT ATTA TTTTTTGTTATTTTT TERM 74 69655 - 69677 + G 72 -13.4 -2.70932 | CGGGCGGGTGAACCT TCACGGCCGG AAA CTGGCCGTGG TCCTTAGCGGGGGCA TERM 75 69775 - 69759 - g 72 -13.7 -2.8194 | TAACCAGGCAGGATA TCGGCGC TTG GCGCCGA AAAAAGGCCTCAGGA TERM 76 69804 - 69781 - g 77 -2.2 -5.00616 | opp_overlap 69799 69803 TTGGCGCCGAAAAAA GGCCTCAGGA TGTT TCCAGGCGCC GGGTTCGGGAACCCG Daud_0066 68777 - 69853 + | threonine dehydratase Daud_0067 69859 - 70125 + | SpoVG family protein TERM 77 70645 - 70659 + G 86 -12.8 -4.07568 | AAGTTCTGGTGGTCT GCGGGG ACA CCCCGC TTTTGCGCGGCGAAA TERM 78 70780 - 70790 + G 76 -8.2 -4.18934 | overlap 70778 GGGTCATTCGTGACG CCGC GGG GCGG TTTGTTCGGATCGTG Daud_0068 70344 - 71744 + | UDP-N-acetylglucosamine pyrophosphorylase TERM 79 72026 - 72015 - g 70 -7.2 -4.08767 | overlap 72016 TCGACGCTCTGAAAA GGGC TTCA GCCC GCCGGATCACCGCGG Daud_0069 71768 - 72724 + | ribose-phosphate pyrophosphokinase Daud_0070 72773 - 73408 + | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 80 73494 - 73529 + G 100 -9.7 -5.04175 | gap 2 GGTGGACCGGCTCGC CGGCGCC-GCGG-GCAC AACG GTGAACCGCAGGCGCTG TTTTTCTCTCGTTGG Daud_0071 73405 - 73992 + | aminoacyl-tRNA hydrolase TERM 81 74079 - 74050 - f 77 -11.6 -3.60792 | gap 1, opp_overlap 74058, overlap 74058 CCGGTAACGCCGAAA CCGAAAA-AGGGG TCAGG CCCCTTTTTTCGG GACACCTTTGTTGGG TERM 82 74070 - 74058 - f 78 -6.2 -4.81249 | opp_overlap 74058, overlap 74050 GCCGAAACCGAAAAA GGGG TCAGG CCCC TTTTTTCGGGACACC TERM 83 74058 - 74070 + F 86 -6.9 -5.00616 | opp_overlap 74058 74050 GCCGAAACCGAAAAA GGGGT CAG GCCCC TTTTTTCGGGACACC TERM 84 74134 - 74122 - f 100 -6.9 -5.64006 | opp_overlap 74122 AGGCAAGGAAAAAAA GGGGC CTG ACCCC TTTTTCGGGTGGACG TERM 85 74122 - 74134 + F 75 -6.2 -4.62069 | opp_overlap 74122 AGGCAAGGAAAAAAA GGGG CCTGA CCCC TTTTTCGGGTGGACG TERM 86 74426 - 74442 + G 76 -5.7 -4.55826 | overlap 74427 CGACCTGGTCACCCT GCTCCCG GGC CGGGGGA TTTTCGTGTTTTCAG TERM 87 76983 - 76944 - g 70 -7.8 -4.07687 | gap 1, overlap 76947 76957 ACTCTGGTCGTAAAA GAAGC-GGACCAACTGGGC CTG GCCCAACTGTACCAGCTCC GGGGGCGGGTGGGCC TERM 88 77485 - 77447 - g 72 -11.7 -3.28712 | gap 1, opp_overlap 77449 77450, overlap 77448 GGCTCCGGTGGAGAA CTTGCTGGCCATCGCCCG GATC CGGGCGATGGCCAAGG-G TTTCAGGATCAAAAG TERM 89 77449 - 77485 + G 86 -15.2 -3.57144 | gap 1, opp_overlap 77447 77448, overlap 77450 CTCCGGTGGAGAACT TGC-TGGCCATCGCCCG GATC CGGGCGATGGCCAAGGG TTTCAGGATCAAAAG TERM 90 77450 - 77484 + G 81 -16.5 -2.74144 | gap 1, opp_overlap 77447 77448, overlap 77449 TCCGGTGGAGAACTT GC-TGGCCATCGCCCG GATC CGGGCGATGGCCAAGG GTTTCAGGATCAAAA Daud_0072 74214 - 77744 + | transcription-repair coupling factor Daud_0073 77857 - 78417 + | AbrB family transcriptional regulator TERM 91 78431 - 78418 - f 74 -8.1 -4.01101 | opp_overlap 78418 CAAATGGAACAATAA TGGCC GAAA GGCCA TTTTTTTTTGCCTCG TERM 92 78418 - 78431 + F 100 -8.1 -6.11644 | opp_overlap 78418 CAAATGGAACAATAA TGGCC GAAA GGCCA TTTTTTTTTGCCTCG TERM 93 78695 - 78671 - g 74 -14.2 -2.59683 | overlap 78670 AGTGTACCGGAGAAT CGCCGCGACG GTGAT CGACGCGGCG CGGCGGGAGACGGTG TERM 94 78778 - 78812 + G 71 -11.3 -3.41587 | opp_overlap 78797 TTCTGGATGGAGCCC GGCGGGCCGGACTTG AAACC CGGGTGCGGCCGGCC TTGAGTTTTCTGGAC Daud_0074 78456 - 79919 + | MazG family protein Daud_0075 80008 - 80283 + | histone family protein DNA-binding protein Daud_0076 80293 - 80559 + | RNA-binding S4 domain-containing protein TERM 95 80590 - 80624 + F 81 -8 -4.30793 | TGTTGCCTGTTGAGG TTTAAGGAAGGGTT GAGTCAA GGCCCTTCCTTAGA TTATTTATTGTGTCG TERM 96 80636 - 80662 + F 84 -12.9 -3.38378 | overlap 80636 80639 TAGATTATTTATTGT GTCGGCCGCCG ATAAA CGGCGGCCTGC CTTTTTAGCATATCA TERM 97 80636 - 80663 + F 95 -10.5 -4.65168 | gap 1, overlap 80636 80639 TAGATTATTTATTGT GTC-GGCCGCCG ATAAA CGGCGGCCTGCC TTTTTAGCATATCAT TERM 98 80639 - 80659 + F 83 -15.4 -2.84617 | overlap 80636 80636 ATTATTTATTGTGTC GGCCGCCG ATAAA CGGCGGCC TGCCTTTTTAGCATA Daud_0077 80718 - 81026 + | YabP family protein TERM 99 81120 - 81132 + G 83 -4.7 -5.00388 | ATCAATCGTGATCGG GACGG GAG CCGCC TTTCTTTTTGATTTC Daud_0078 81070 - 81525 + | hypothetical protein Daud_0079 81858 - 81520 - | hypothetical protein Daud_0080 82151 - 81861 - | hypothetical protein TERM 100 81909 - 81899 - G 72 -2.4 -4.74215 | overlap 81901 ACAGTACGAACAAAA GGCC GGC GCCC AGGGCAAAAAACAGT TERM 101 82738 - 82716 - g 71 -9 -3.70902 | opp_overlap 82715, overlap 82719 82721 CGGTGCAGATCGAAA TCAGAGGCGC CGA GCGCCTCAGC CTTCGTGAGCGCCAG TERM 102 82735 - 82719 - g 74 -13.7 -2.95942 | opp_overlap 82715, overlap 82716 82721 TGCAGATCGAAATCA GAGGCGC CGA GCGCCTC AGCCTTCGTGAGCGC Daud_0081 82703 - 82954 + | regulatory protein, LuxR Daud_0082 82935 - 83279 + | septum formation initiator TERM 103 83429 - 83449 + T 85 -2.4 -5.55664 | overlap 83423 83431 TCAGGGTGCGCCGCA CGCTCGGC TTCGT GCTGGGGG TTTTTTTCCTCGTCC TERM 104 83559 - 83522 - T 100 -12.8 -5.10767 | gap 1, opp_overlap 83525 83526 GATTCAAGAGAAAAA CCAA-GTAAGCCTCCGG ATGAA CCGGGGGCCTACGTTGG TTGACCGGGCGCCAA TERM 105 83526 - 83554 + T 72 -12.4 -2.60075 | opp_overlap 83522, overlap 83525 CAAGAGAAAAACCAA GTAAGCCTCCGG ATGAA CCGGGGGCCTAC GTTGGTTGACCGGGC Daud_0083 84466 - 83597 - | ATP phosphoribosyltransferase TERM 106 83638 - 83649 + g 72 -7.2 -4.11216 | ACTCAATGATATCTT GGGC TCCG GCCC TTTTCAGGATCGGGA TERM 107 84683 - 84672 - H 71 -7.2 -3.99986 | TCAAGAAAACTCAAA GGGG CAAT CCCC GAAAAAGGTGTCAGA TERM 108 84684 - 84708 + H 95 -14.5 -3.53444 | opp_overlap 84690, overlap 84690 AAAGGGGCAATCCCC GAAAAAGGTGT CAG ACACCTTTTTC TTTCCAAGAAGATCA TERM 109 84690 - 84702 + H 100 -7.7 -5.27335 | opp_overlap 84690, overlap 84684 GCAATCCCCGAAAAA GGTGT CAG ACACC TTTTTCTTTCCAAGA TERM 110 84702 - 84690 - H 83 -7.7 -4.59853 | opp_overlap 84690 84684 GCAATCCCCGAAAAA GGTGT CAG ACACC TTTTTCTTTCCAAGA Daud_0084 84737 - 85702 + | Ppx/GppA phosphatase TERM 111 86611 - 86627 + G 91 -9.3 -4.46212 | overlap 86584 CGGCACTTCGGCAAG CCGGGGG TGG CCGCCGG TTTTCTGCTGGGCAA Daud_0085 85780 - 88200 + | phosphoprotein phosphatase TERM 112 88731 - 88765 + G 91 -12.2 -4.25104 | gap 2 CCGCGGCACCGGACC GGCCGGCCTGGCCGGC ATCGC GCCGGTCAGG--GGCC TTTTCATCCGGCCCC Daud_0086 88288 - 89700 + | tRNA(Ile)-lysidine synthetase Daud_0087 89780 - 91642 + | ATP-dependent metalloprotease FtsH TERM 113 92014 - 92029 + G 74 -2.4 -4.86731 | TCGGCGGCCAGCGCC GCGCGG GAGA TCGGGC TTTTCTTTGCGGACG Daud_0088 91645 - 92097 + | nucleoside-diphosphate kinase TERM 114 92441 - 92415 - g 71 -9.2 -3.72576 | GTGTTCGGGATCAAA GGCGGTGCCGCC GGG GGCGGGTACGCC CAAGTGGTGCCCATG TERM 115 93478 - 93466 - g 85 -3.3 -5.32565 | overlap 93467 CAATCAAGGAAAAAA TCGAG GTG CTCGC CCGGCGGGTCTACAA Daud_0089 92094 - 93794 + | formate--tetrahydrofolate ligase Daud_0090 93987 - 94448 + | hypothetical protein TERM 116 94746 - 94724 - g 93 -17.8 -3.31144 | GCGTCAGGGTTACAA GGTCGGCATC CTG GATGCCGACC TGACCGGACCGAGCA Daud_0091 94476 - 95390 + | hypothetical protein TERM 117 95481 - 95452 - f 83 -15.1 -2.80291 | opp_overlap 95460 95477, overlap 95457 95463 AAGGATGGGATTATA CTGAAGGACAAGG GGGA CCTTGTCCTTCGG CGATTGCCGGGTTGG TERM 118 95476 - 95457 - f 76 -12.2 -3.14468 | opp_overlap 95460, overlap 95452 95463 TGGGATTATACTGAA GGACAAGG GGGA CCTTGTCC TTCGGCGATTGCCGG TERM 119 95488 - 95514 + F 100 -10.2 -5.88565 | overlap 95477 GTCCTTCGGCGATTG CCGGGTTGGA TTCAGGT TCCAATCCGG TTTTTTTGTTCTCCG TERM 120 98015 - 98003 - g 78 -6.9 -4.57569 | overlap 98004 CGAGTCGGTGAAAAA CGCCC TCA AGGCG AAGGCCCTCAATCCC Daud_0092 95682 - 98723 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 121 98924 - 98979 + G 70 -11.8 -3.14344 | gap 1, opp_overlap 98965 98967 GCCTGGCTTGCGGTA CCTGTGCGGCGGCGTGCTACTTCACCG ATC TGGTGGAGAACCACGAC-CCGCGCAAG TTCATGCGCAAGGTC Daud_0093 98803 - 100074 + | hypothetical protein TERM 122 100145 - 100109 - f 100 -22.3 -3.01712 | opp_overlap 100111 100115 GGCGGGTCCTGAAGA GCGTAACCGTGGGGGCG TGC CGCCCCCACGGTTTCTC GTTACGGTGGAACCG TERM 123 100111 - 100143 + F 100 -23.5 -2.73364 | opp_overlap 100109, overlap 100115 CGGGTCCTGAAGAGC GTAACCGTGGGGGCG TGC CGCCCCCACGGTTTC TCGTTACGGTGGAAC TERM 124 100115 - 100139 + F 100 -22.9 -4.0616 | opp_overlap 100109, overlap 100111 TCCTGAAGAGCGTAA CCGTGGGGGCG TGC CGCCCCCACGG TTTCTCGTTACGGTG TERM 125 100371 - 100401 + G 76 -7.4 -4.36914 | overlap 100372 CCTACCTCATGCTGT TCATCGCCCCCCTG ACC TGGGGGGGGGGTGC TTTTGTGGCCGCCGG Daud_0094 100295 - 100546 + | hypothetical protein TERM 126 100845 - 100834 - g 85 -5.8 -5.00616 | GCTTTCCTGAAAAAA CTGC GCAT GCAG CCGTTCGGCCTGGCC Daud_0095 100543 - 101733 + | dihydropteroate synthase TERM 127 101930 - 101918 - g 72 -4.1 -4.62783 | CACCGAGGTGAAAAA GACTT TTC AAGCC CGGCGGTACCGATTG Daud_0096 101730 - 102101 + | dihydroneopterin aldolase Daud_0097 102098 - 102607 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Daud_0098 102776 - 103525 + | silent information regulator protein Sir2 TERM 128 103868 - 103847 - f 95 -10.1 -4.7497 | opp_overlap 103847 TGGATTTATGAAAAA TCCCACGGA TCTG TCCGGGGGA TTTTTACTTTCAGGT TERM 129 103847 - 103868 + F 100 -10.1 -4.99134 | opp_overlap 103847 TGGATTTATGAAAAA TCCCACGGA TCTG TCCGGGGGA TTTTTACTTTCAGGT Daud_0099 103911 - 104804 + | oxidoreductase domain-containing protein Daud_0100 104797 - 105627 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 130 106153 - 106166 + GF 71 -5.2 -4.4078 | overlap 106150 GCTGGCCCGGGAGGC CGGC GTGACG GCCG TTTTCGTTCCCGGCA TERM 131 106278 - 106301 + GF 70 -6.6 -4.12188 | CGGGACACTTCCGGG GCGTGGCCAC GGTG GTGGCGAAGC TTTTCAACATCGTCC TERM 132 106315 - 106329 + GF 77 -2.7 -5.0538 | opp_overlap 106311, overlap 106316 GCTTTTCAACATCGT CCGGC CGGAC GCCGC TTTTTTCGGCTGGAA TERM 133 106521 - 106535 + GF 81 -8.5 -4.36914 | ACCGGAGCCTGCTGG CGGCC CGTGA GGCCG TTTTGTCCGGCGAGG TERM 134 106682 - 106712 + GF 86 -16 -2.71364 | CGGGAACTGCTTCTA GCCGTGGCGGCCCG CTT CGGGCGGGCGCGGC TGATTGACAACGTGG Daud_0101 105836 - 106819 + | pantoate--beta-alanine ligase Daud_0102 106794 - 107195 + | aspartate 1-decarboxylase TERM 135 107311 - 107330 + F 75 -6.3 -4.62471 | overlap 107312 ACCGATTCCTTCCGG CCCGGCC CTCCAT GGCCGGC TTTTTCCGACTTCCG TERM 136 107312 - 107329 + F 70 -9.8 -3.37 | overlap 107311 CCGATTCCTTCCGGC CCGGCC CTCCAT GGCCGG CTTTTTCCGACTTCC TERM 137 107369 - 107393 + F 100 -13.6 -5.12068 | opp_overlap 107368 107365 TAACCGGCAAACCAT CGCTGCCAGT CTACA ACTGGCGGCG TTTTTATTGCCTCTC Daud_0103 107519 - 108403 + | methenyltetrahydrofolate cyclohydrolase TERM 138 109502 - 109521 + G 73 -8.6 -4.09243 | gap 1 TCAGGGAGCCTCATT CATCGGCGC GCT GC-CCGATG TTTTCCCCGGCTATA TERM 139 110574 - 110535 - g 83 -5.1 -5.04222 | gap 3, overlap 110536 CAAGTAAAGCAAAAA CCGCCC-TGCCCTTCCGAAG GTG CTCC--AAGGGCATGGGCGC CTGGACAACCATACC Daud_0104 108495 - 110669 + | formate dehydrogenase, alpha subunit TERM 140 111513 - 111524 + G 86 -7.2 -4.72272 | GTGGTCGGCCCTTTG GCGC AGCA GCGC TTTTTCCTGAAAACC TERM 141 111903 - 111875 - g 79 -8.7 -4.2679 | GAAGTGTCATCAAAA CTGCGCCAACCTG CTG CCGGTCGGCACGG CGGTCAGCCGGGCGG TERM 142 112082 - 112053 - g 95 -10.7 -4.40003 | gap 1, overlap 112055 GCGGAGAAATACAAA GT-GCGGGTCGGCC GGG GGCCGATCCACGAC GTGGAAATAAGAAAA TERM 143 112079 - 112055 - g 71 -13.5 -2.53244 | overlap 112053 GGAGAAATACAAAGT GCGGGTCGGCC GGG GGCCGATCCAC GACGTGGAAATAAGA TERM 144 112526 - 112536 + G 71 -4.6 -4.4078 | overlap 112533 GGGGGCGATACGGTG GGGG ATT CCTC TTTTGCTTGGCCCCC Daud_0105 110679 - 112979 + | CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit Daud_0106 113023 - 113577 + | CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit Daud_0107 113622 - 114377 + | cobyrinic acid a,c-diamide synthase Daud_0108 114410 - 115543 + | hypothetical protein TERM 145 116508 - 116519 + G 70 -7.2 -4.03234 | overlap 116511 ATCGAGATCTTCCGG GGCG CCGG CGCC TTTGTCTGCGGCGAA Daud_0109 115584 - 117554 + | NADH dehydrogenase (quinone) TERM 146 118364 - 118342 - g 76 -6.1 -4.59853 | opp_overlap 118355 118357, overlap 118344 GCAAGCGTGGAAAAA GGGGCCACC GTTTT GGAGGCCGC GCAAAAGGCGGGCAT TERM 147 118826 - 118795 - g 71 -9.4 -3.75153 | gap 1, overlap 118809 GCGCTGGAATTCAAA CGCGTGGACAACCAC CGG GTGGTGGTCCCC-CG GCAGGGAGGCAGTCT Daud_0110 117535 - 120531 + | molybdopterin oxidoreductase TERM 148 121117 - 121103 - g 84 -4.2 -5.1101 | CCATCATCGAAAAAA TGCAGG TAA CCTTCA TAACCGACCCCGAAA Daud_0111 120667 - 121866 + | CO dehydrogenase/acetyl-CoA synthase complex, beta subunit Daud_0112 121918 - 123276 + | CO dehydrogenase/acetyl-CoA synthase delta subunit TERM 149 123636 - 123624 - g 74 -5.5 -4.43213 | GGGAAGACAGCAAAA GGGAA ATG CTCCC GCTGGCCCAAAAATA Daud_0113 123311 - 124183 + | dihydropteroate synthase, DHPS Daud_0114 124222 - 125118 + | corrinoid/iron-sulfur protein, small subunit Daud_0115 125438 - 125959 + | methyl-viologen-reducing hydrogenase, delta subunit TERM 150 126002 - 125976 - g 74 -9.2 -3.85698 | CGTGGCGCGGAGAAA GCCGGCGCCCCC GTT GCTGGCGGCGGC CACGGGAAGAAGAAC TERM 151 126310 - 126334 + G 71 -11.4 -3.53091 | gap 1, overlap 126310 GTGGACACCGTGTTC G-CCGGCGGCT CCCC GGCCGCCGGGC TTTGGGAAGAGCGCT Daud_0116 125956 - 126621 + | zinc-finger protein Daud_0117 126618 - 127538 + | methylenetetrahydrofolate reductase Daud_0118 127568 - 129241 + | formate--tetrahydrofolate ligase TERM 152 129677 - 129663 - g 74 -5 -4.64766 | TTCAGACCGGAAAAA GACAAA CCC TTTGCC GCCGTGGCCATAACC Daud_0119 129288 - 130037 + | response regulator receiver protein Daud_0120 130860 - 131081 + | hypothetical protein TERM 153 131769 - 131724 - g 73 -6.7 -4.27316 | gap 1, overlap 131706 131727 CGGGCGAAGCGAAAA CACCCGGA-GGCCCTCGTGGTG GTG CATCCCGAGTGCCGTCCCGACG TGATCGACCTGGCCG Daud_0121 131154 - 132065 + | quinolinate synthetase complex, A subunit TERM 154 132353 - 132391 + G 79 -10.9 -3.87815 | gap 1, opp_overlap 132360 ACTGAACGGGCACAG GGAGGAATCG-CGGCCGC TATC GGGGCCGGCGACTCCCCC TTTCTACACCTGGAG TERM 155 132660 - 132648 - g 82 -3.3 -5.1675 | CCACGGAGCAAAAAA TCCCG GTG CTGGA GCACAACTTTGTGGT Daud_0122 132146 - 133762 + | L-aspartate oxidase TERM 156 134012 - 134028 + G 76 -9.3 -4.09685 | opp_overlap 134011, overlap 134013 GCTGGCTGAGGTAAG CGGGGCG GCG CGCCCCA TTTTGACCGGTGAGC TERM 157 134013 - 134027 + G 71 -12.8 -3.05597 | opp_overlap 134011, overlap 134012 CTGGCTGAGGTAAGC GGGGCG GCG CGCCCC ATTTTGACCGGTGAG Daud_0123 133755 - 134609 + | nicotinate-nucleotide pyrophosphorylase Daud_0124 135058 - 134594 - | GreA/GreB family elongation factor TERM 158 135108 - 135084 - H 100 -13.5 -5.00616 | opp_overlap 135087, overlap 135085 CCCTGTTCCAAAAAA TCACCCCGCCC CCC GGGCGGAGTGC TTCAAGCCAATCACT TERM 159 135107 - 135085 - H 100 -17 -3.60048 | opp_overlap 135087, overlap 135084 CCTGTTCCAAAAAAT CACCCCGCCC CCC GGGCGGAGTG CTTCAAGCCAATCAC Daud_0125 135205 - 136182 + | biotin--acetyl-CoA-carboxylase ligase TERM 160 136294 - 136247 - g 78 -9.8 -4.08216 | gap 1, opp_overlap 136250, overlap 136248 CTACGCGGGGGAAAA CCTGCTGGCCCACTGGCGTTTGA GCA CCAAGCGGCAGTGGACC-GCCGA CGAGTTCGGCATCCT Daud_0126 136170 - 136958 + | Baf family transcriptional activator Daud_0127 137088 - 138092 + | nifR3 family TIM-barrel protein TERM 161 138161 - 138181 + G 86 -8.1 -4.66163 | overlap 138165 GGCGGAGTGGCTGGT GCGCGGCGG CGG CCGCCTGGC TTTTTACCTGGGGAT TERM 162 138551 - 138529 - g 74 -4.7 -4.58395 | overlap 138531 GGTACTGCCTAAAAA CGGTCCGGC CGGAC GCCGGAAAG CTCCCCGCACCCGCG TERM 163 139058 - 139075 + G 88 -8.4 -4.7373 | GTTCACCGCCATGTA CGCAGC CGGACT GCTGCG TTTTTCCTAACCTGC Daud_0128 138093 - 139085 + | CaCA family Na(+)/Ca(+) antiporter Daud_0129 139194 - 140309 + | shikimate/quinate 5-dehydrogenase Daud_0130 140486 - 140977 + | transcription elongation factor GreA Daud_0131 141002 - 142474 + | lysyl-tRNA synthetase TERM 164 145126 - 145183 + T 93 -9.2 -4.82901 | gap 2, opp_overlap 145109 145126, overlap 145126 145128 GTATGCCTACAAGCA GT-CGGAG-CACTATTTGGTCGTCGGTC GTCA GACCGACGACCGAAGTGTGACGGCGTAC TTTTTGTAGAACGGG TERM 165 145128 - 145180 + T 80 -12 -3.31915 | gap 1, opp_overlap 145109 145126, overlap 145126 145126 ATGCCTACAAGCAGT CGGAG-CACTATTTGGTCGTCGGTC GTCA GACCGACGACCGAAGTGTGACGGCG TACTTTTTGTAGAAC TERM 166 147439 - 147423 - T 70 -5.1 -4.4715 | GCTCAACGGATAAAA GCTACCC CGG GGATAAC AGGCTTATCTCCCCC TERM 167 148049 - 148086 + T 100 -17.2 -4.13728 | gap 1, opp_overlap 148049 148052 CCGCCGGAGCTAAAA TGAGAGAAGACCCCGGT AAAAA GCCGGGGTCTTCTC-CA TTTTGCCGGTATATG TERM 168 148086 - 148049 - T 100 -16.5 -4.18018 | gap 1, opp_overlap 148049, overlap 148052 CCGCCGGAGCTAAAA TGAGAGAAGACCCCGG TAAAAAG CCGGGGTCTTCTC-CA TTTTGCCGGTATATG TERM 169 148084 - 148052 - T 100 -19.3 -3.11208 | opp_overlap 148049, overlap 148049 CCGGAGCTAAAATGA GAGAAGACCCCGG TAAAAAG CCGGGGTCTTCTC CATTTTGCCGGTATA Daud_0132 148995 - 148690 - | DNA polymerase beta subunit Daud_0133 149398 - 149009 - | HEPN domain-containing protein TERM 170 149422 - 149447 + H 81 -2.5 -5.31059 | gap 1, overlap 149411 149408 CGCTCCTTTGCCGGC GTTT-GCCGGCG AAC CGCTTGCTGAAC TTTTTTGATTGGTAT TERM 171 149645 - 149617 - H 100 -18.9 -3.52918 | opp_overlap 149617, overlap 149613 GAATGCGCAAAGCAA GAGCCAGCGGCTG TTT CACCCGCTGGCTC AAAGAAATAGCCACT TERM 172 150234 - 150261 + G 81 -14 -3.55444 | CCCGCCGGAGGCCCT GCGGCCGCGCCC GGGA GGGGGCGTCCGC TTTGCCCGGTCGCAG Daud_0134 149953 - 150438 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_0135 150441 - 152177 + | aldehyde ferredoxin oxidoreductase TERM 173 152396 - 152358 - g 84 -16.7 -3.09117 | gap 1, overlap 152355 GGACAAAGGAAAGGA GTCCGGCGCCGCCCCACC GGGC GGTGAACCGGCGCCGG-C GGTGTCAGTGGACGA TERM 174 152534 - 152523 - g 70 -7.2 -4.07568 | TTTCTCTCCGGAAAA CGCG CTCG CGCG GTTGGAGCAGATCGC TERM 175 152740 - 152758 + G 76 -7.4 -4.3898 | overlap 152741 AGGGCGTTGGAGGCG GCCGAAAG CGA CTTTCGGA TTTTCTGGAACTCCT Daud_0136 152254 - 152790 + | hypothetical protein Daud_0137 153645 - 152890 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 176 154699 - 154683 - g 85 -5.8 -5.09426 | gap 1, overlap 154684 154685 TCGAAGTTGAAAAAA CGCGGCC TGAC GGCCG-G AGAATCGACGTCAGC TERM 177 157835 - 157803 - g 71 -5.5 -4.29845 | gap 1, opp_overlap 157807, overlap 157807 TAACCGAACTGAAAA CGTACGCCGGGATC CAGTTC GA-CCCGGCGTTGG TAGAGGTGTTTGTGC Daud_0138 153881 - 157897 + | diguanylate cyclase with PAS/PAC sensor Daud_0139 159083 - 157929 - | ATPase TERM 178 158202 - 158192 - G 74 -2.4 -4.82901 | TCCGGTCCAGAAAAA CGTC CAG GTCG TACGCGGCCACCCGC Daud_0140 161104 - 159260 - | asparagine synthase (glutamine-hydrolyzing) TERM 179 159721 - 159703 - G 70 -7.4 -4.07568 | CCTTGCGGTCCAAAA GCGTGGTC ATG AACCACAC GAGGTTTAAGTAGAA TERM 180 159754 - 159798 + g 75 -12.1 -3.57144 | gap 2, opp_overlap 159737 159740 159739 TCTCGCGCCGGCGGG CCCCGACCG-GGT-CCTCGCC GGACA GGCGGGGTACCTCGGCCAGGG TTTCGGCGTACCGGG TERM 181 161560 - 161593 + H 86 -6.7 -5.00884 | gap 1, opp_overlap 161559, overlap 161562 161563 161564 TTGTATCGAAACAGG TCTA-GGACGCCCTTC TTT GAGGGGCGTCCATCTA TTTTTTCCAGACCCT TERM 182 161562 - 161591 + H 80 -9.3 -4.13561 | gap 1, opp_overlap 161559, overlap 161560 161563 161564 GTATCGAAACAGGTC TA-GGACGCCCTTC TTT GAGGGGCGTCCATC TATTTTTTCCAGACC TERM 183 161563 - 161589 + H 95 -14.4 -3.66166 | opp_overlap 161559, overlap 161562 161560 161564 TATCGAAACAGGTCT AGGACGCCCTTC TTT GAGGGGCGTCCA TCTATTTTTTCCAGA TERM 184 161564 - 161588 + H 95 -17.9 -2.78977 | opp_overlap 161559, overlap 161563 161562 161560 ATCGAAACAGGTCTA GGACGCCCTTC TTT GAGGGGCGTCC ATCTATTTTTTCCAG Daud_0141 161656 - 161991 + | nitrogen regulatory protein P-II Daud_0142 162169 - 163563 + | ammonium transporter TERM 185 163642 - 163606 - f 100 -20.2 -2.71483 | overlap 163594 ATATCGGGGCAAGGA GGCCCCTCCCCGGAAC CCGAC GTTCCGTAGAGGGGCC TTCCCAGTCCCACCA Daud_0143 163686 - 164528 + | nitrogenase iron protein Daud_0144 164529 - 164846 + | nitrogen regulatory protein P-II Daud_0145 164860 - 165222 + | nitrogen regulatory protein P-II Daud_0146 165256 - 166704 + | nitrogenase component I, alpha chain TERM 186 168014 - 168026 + G 73 -6.9 -4.34402 | overlap 168011 CTCCAGATCCCGCTG GTCCG GGC CGGGC TTTTCGTGTACGACC Daud_0147 166688 - 168160 + | nitrogenase TERM 187 168300 - 168257 - g 86 -15.2 -3.57144 | gap 1 GGCGTGATTGTGAAA CCGGAACCGCGCCTGCCGGCC TGT GACCGGCAGACGGTGC-CCGG AGCCATGTCCCAGCG TERM 188 168607 - 168655 + G 100 -12.9 -4.62069 | overlap 168609 CCGGGTCTGCCGCCG GGCCGAGCGGGACACGGGCATGC GCT GCGTGCCGGTGCACTGCCCGGGC TTTTTGGGATACCAC TERM 189 168609 - 168653 + G 71 -14.1 -2.61831 | overlap 168607 GGGTCTGCCGCCGGG CCGAGCGGGACACGGGCATGC GCT GCGTGCCGGTGCACTGCCCGG GCTTTTTGGGATACC Daud_0148 168164 - 169543 + | nitrogenase Daud_0149 169524 - 170381 + | radical SAM domain-containing protein TERM 190 170406 - 170394 - f 100 -9.1 -5.13137 | opp_overlap 170394 170393 TAAAGAAAGTAAAAA GGTGC CTG GCACC GTTTTGGTGGTCCCT TERM 191 171289 - 171253 - g 74 -5.7 -4.40804 | opp_overlap 171287 TATCACCTGAGAAAA CAGCGGCAGCGCC TGGAAGTGGTC GGCGCGGTCGCCG CCCGGTACAGCCGGC Daud_0150 170689 - 172320 + | NAD+ synthetase Daud_0151 172889 - 172413 - | hypothetical protein TERM 192 173034 - 173054 + r 90 -12.5 -3.77119 | overlap 173035 CTAGCGGCAACCGCC GGGGCGGCT TCG AGCCGCCCA TTGTCTTGCTTACTC TERM 193 173035 - 173053 + r 86 -16 -2.85548 | overlap 173034 TAGCGGCAACCGCCG GGGCGGCT TCG AGCCGCCC ATTGTCTTGCTTACT TERM 194 173148 - 173120 - R 100 -13.2 -5.26875 | GGGGCAATGAAAAAA GCCGGCAGGA TAATGATGT TCCTGCCGGC AAGAGCCCCTGATAT TERM 195 173174 - 173153 - R 72 -11.6 -3.01712 | TTCCTGCCGGCAAGA GCCCCTGA TATATG TCAGGGGC GGGAATGGCCCCGAG Daud_0152 174944 - 173202 - | hydrogenase, Fe-only TERM 196 173907 - 173919 + g 85 -6.2 -5.08601 | GACAAATACGTCGGC GGGG TCGAT CCCC TTTTTCTTGGCGTAG TERM 197 177700 - 177682 - H 72 -11.8 -2.55351 | opp_overlap 177676 177675, overlap 177681 GCTCCGCATAGTAAT TGCCACTA ACA TAGTGGCA GTCACCCTTGTGTCA TERM 198 177996 - 178048 + H 87 -13.5 -3.2348 | opp_overlap 177996 178001, overlap 178001 CCTCACCCCCAAAAA CAAAAGACCACGAAAGTCTTCGGTA CCT TTCGGCCGACCTTCGTGGTCTTTTG TTCGCTCTTAATTTT TERM 199 178048 - 177996 - H 100 -15.7 -4.59773 | opp_overlap 177996 178001, overlap 178001 CCTCACCCCCAAAAA CAAAAGACCACGAAAGTCTTCGGTA CCT TTCGGCCGACCTTCGTGGTCTTTTG TTCGCTCTTAATTTT TERM 200 178043 - 178001 - H 100 -9.8 -5.26119 | opp_overlap 177996 178001, overlap 177996 CCCCCAAAAACAAAA GACCACGAAAGTCTTCGGTA CCT TTCGGCCGACCTTCGTGGTC TTTTGTTCGCTCTTA TERM 201 178001 - 178043 + H 86 -7.6 -4.71776 | opp_overlap 178001 177996, overlap 177996 CCCCCAAAAACAAAA GACCACGAAAGTCTTCGGTA CCT TTCGGCCGACCTTCGTGGTC TTTTGTTCGCTCTTA TERM 202 178301 - 178341 + H 91 -3.5 -5.4505 | gap 3, overlap 178315 CAGCGAAGATACAAG CCACGAAGGTCAGGCTTTGC CGAA GCAAAGTTT--CCT-CGTGG TTTTTTGTTGGGAAA TERM 203 178366 - 178400 + H 100 -12.1 -4.96848 | opp_overlap 178366 GGGAAAGGTAAAGGA CGCGAATTTCCGGGC ACGAA GGCCGGGGGTTCGCG TTTTTGTGTCCGGGA Daud_0156 178430 - 178963 + | hypothetical protein Daud_0157 179108 - 180679 + | hydrogenase, Fe-only Daud_0159 182457 - 181126 - | transposase, IS4 family protein TERM 204 181558 - 181548 - G 76 -6.8 -4.48713 | GGCAGCAACAATAAA CCGT TCC ACGG TAATCGTAAACGATG TERM 205 182454 - 182477 + g 75 -3.8 -4.68456 | GTTGTGGTATAATGG CCATAAGGGA AACC TCCTTCGTGG TTCTTTTTTGGTGGT TERM 206 183404 - 183414 + G 76 -8.2 -4.20806 | overlap 183398 TGTTTTTGGCGGTGA CCGG GTA CCGG TTTGCTTTTGGCCTG Daud_0160 183307 - 184515 + | polysulphide reductase, NrfD TERM 207 184805 - 184855 + F 80 -9.2 -4.14243 | gap 4, opp_overlap 184805, overlap 184821 ACGAAGGTTGTTAAA GGCCACGAAGGCTTCGCTTCCCCGGG AAA CCCGGGGA--C-AGTCCTT-GTGGCC TTTTCGCATACCGTA TERM 208 184821 - 184844 + F 81 -13.2 -2.85909 | gap 1, opp_overlap 184805, overlap 184805 GCCACGAAGGCTTCG CT-TCCCCGGG AAA CCCGGGGACAG TCCTTGTGGCCTTTT TERM 209 184917 - 184941 + F 71 -10 -3.52177 | AGGCAAGGGATAGCG GGCCCACC CTTGCTACC GGTGGGCC TTGACTTTTTTAGGG Daud_0161 184967 - 185215 + | hypothetical protein TERM 210 185696 - 185737 + G 88 -17.3 -3.01712 | gap 1 CCGCCCTGCGGATCG CCGCCATCGGGCTGGGACGG GGA CTGGCCCAGGCC-ATGGCGG TGTTACAGGGGGCGC Daud_0162 185224 - 186678 + | fumarate lyase TERM 211 186760 - 186738 - g 73 -3.3 -4.68994 | ACCACTACGGAAAAA GCCTGGC TGGACGAAC GCCTGGC ATACATCAAGGCCTA Daud_0163 186717 - 188192 + | biotin and thiamin synthesis associated TERM 212 188478 - 188440 - g 71 -8.9 -3.85698 | gap 2, overlap 188410 188467 GCGGCCGGGCAGAAA GGCCG-C-CTGCTGGCC GAGCTGA GGCAAGCAGTGGCGGCC TGCGCCGGTGCCGGG TERM 213 188537 - 188523 - g 70 -7.8 -4.07568 | GGGTGCCGCCGAAAA CCAGTC CCG GACCGG AAAACGAAAGGAGAC Daud_0164 188176 - 188562 + | hypothetical protein TERM 214 188638 - 188626 - f 77 -4.7 -4.92239 | opp_overlap 188627, overlap 188627 GTAAAAAGGTAAAAA GGGGC CTG GCCCT TTTTGGGGAGGGGTG TERM 215 188627 - 188637 + F 87 -8.2 -4.56775 | opp_overlap 188627 188626 TAAAAAGGTAAAAAG GGGC CTG GCCC TTTTTGGGGAGGGGT Daud_0165 188660 - 189943 + | small GTP-binding protein TERM 216 190542 - 190508 - g 76 -9.9 -3.84246 | gap 2, opp_overlap 190509 190521, overlap 190503 190509 TTCTCAAGCACGAAA CGGCCGACCCGGCGCTC TTC GCGCGCCTG--CGGCCG GGCACCACGCTCGCC Daud_0166 189949 - 191061 + | radical SAM domain-containing protein Daud_0167 191157 - 191483 + | DsrE family protein TERM 217 191549 - 191529 - f 71 -4.6 -4.63218 | opp_overlap 191529 191530, overlap 191530 TGGGTTTCAAGAAAA CGTCTCCC TTCAT GGGTGACA TTTTCTCAGACCGCT TERM 218 191772 - 191740 - f 91 -11.9 -4.21744 | opp_overlap 191745, overlap 191742 191745 AGCCAATAAACGAAA GAGCAGCCGCCGCAC ACT GTGCGGCGGCTTTTG AGTTTTGCAGGGCGA TERM 219 191770 - 191742 - f 95 -14.5 -3.69681 | opp_overlap 191745, overlap 191740 191745 CCAATAAACGAAAGA GCAGCCGCCGCAC ACT GTGCGGCGGCTTT TGAGTTTTGCAGGGC TERM 220 191767 - 191745 - f 100 -20.6 -2.92988 | opp_overlap 191745, overlap 191742 191740 ATAAACGAAAGAGCA GCCGCCGCAC ACT GTGCGGCGGC TTTTGAGTTTTGCAG TERM 221 191745 - 191767 + F 100 -20.6 -4.4267 | opp_overlap 191745 191742 191740 ATAAACGAAAGAGCA GCCGCCGCAC ACT GTGCGGCGGC TTTTGAGTTTTGCAG TERM 222 191994 - 191980 - f 89 -2.8 -5.44119 | GTTACTTCAAAAAAA CACC AAGCGAG GGTG AAAAATGACGCTGAA Daud_0168 191999 - 193768 + | UbiD family decarboxylase Daud_0169 193841 - 194161 + | hypothetical protein TERM 223 194209 - 194186 - T 71 -4.5 -4.57569 | opp_overlap 194172 194171 194186, overlap 194174 CCAGCCTCCGAAAAA GGAGGCAGA CTTTTC TCTCCCCCC TCTGCTTCCGACGAC TERM 224 194448 - 194418 - T 82 -11.2 -3.89614 | opp_overlap 194427, overlap 194421 194427 GCCAAGGCGGAGAAA CCACAAAAAGGGGC CTG GCCCCTTTTTGCAC CGACCACCATTAGGC TERM 225 194445 - 194421 - T 100 -17.3 -3.0169 | opp_overlap 194427, overlap 194418 194427 AAGGCGGAGAAACCA CAAAAAGGGGC CTG GCCCCTTTTTG CACCGACCACCATTA TERM 226 194427 - 194439 + T 95 -10.5 -4.56597 | opp_overlap 194421 194418 194427 GAGAAACCACAAAAA GGGGC CTG GCCCC TTTTTGCACCGACCA TERM 227 194439 - 194427 - T 100 -10.5 -5.06735 | opp_overlap 194427, overlap 194421 194418 GAGAAACCACAAAAA GGGGC CTG GCCCC TTTTTGCACCGACCA Daud_0170 195312 - 194458 - | GCN5-related N-acetyltransferase TERM 228 195378 - 195359 - H 76 -2.8 -5.00616 | overlap 195361 GGCGGGTTGAAAAAA GCTAAGAC TTGA GTCCTATC AGTGTCTGAATATTC Daud_0171 195690 - 196952 + | lysine 2,3-aminomutase YodO family protein Daud_0172 197674 - 196943 - | hydrolase TERM 229 197744 - 197724 - H 72 -11.9 -2.80074 | overlap 197721 197719 CTGCGTACAAGACTA TCCCCGGAA TGC TTCCGGGAA AGAGTAAGCGGCCCC TERM 230 198028 - 198005 - H 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 231 198924 - 198934 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC Daud_0173 198025 - 199356 + | transposase, IS4 family protein TERM 232 200292 - 200309 + G 71 -4.7 -4.41348 | opp_overlap 200275 200273, overlap 200293 CGGCCGGCAGAGTGC TCCGGGC GCCC GACCGGG TTTGTTTCGAAGCCG Daud_0174 199652 - 200467 + | hypothetical protein TERM 233 201168 - 201142 - g 76 -10.1 -3.86524 | gap 1, overlap 201144 201146 ATAGCCGTCCAGAAA GA-CACCGCGCC CGTC GGCGCGGAGGTC CCGGTCAGTGACCGT TERM 234 201165 - 201144 - g 76 -12.9 -3.52113 | overlap 201142 201146 AGCCGTCCAGAAAGA CACCGCGCC CGTC GGCGCGGAG GTCCCGGTCAGTGAC TERM 235 201163 - 201146 - g 77 -14.1 -3.3353 | overlap 201144 201142 CCGTCCAGAAAGACA CCGCGCC CGTC GGCGCGG AGGTCCCGGTCAGTG TERM 236 201738 - 201770 + G 72 -12 -3.31726 | gap 1, overlap 201736 CCTTGCGGCCAGCGC CCGGTCCCGGGTTGA AGCT TTGGCCCGGG-CCGG TATTGTGTGCAACGA TERM 237 201816 - 201845 + G 85 -5.6 -5.03314 | gap 1, overlap 201818 201820 GGATGGTGAAACCTG GACCGG-CCACGG AGACG CCGTGGACCTGGC TTTTTTGGCCCTCGG Daud_0175 200596 - 203322 + | ATPase, P-type (transporting), HAD superfamily, subfamily IC Daud_0176 203609 - 203289 - | hypothetical protein Daud_0177 203806 - 203606 - | hypothetical protein Daud_0178 204047 - 204571 + | Firmicute transcriptional repressor of class III stress genes TERM 238 204623 - 204595 - g 72 -7.3 -4.10744 | overlap 204596 CGATGCAAACAACAA CCGGCCTCGGTGC ACT ACACCGAGGTCAT CAATAATCAGAAACG Daud_0179 204568 - 205071 + | UvrB/UvrC protein Daud_0180 205091 - 206236 + | ATP:guanido phosphotransferase TERM 239 206283 - 206253 - f 74 -6.8 -4.25848 | overlap 206240 206254 AAGCGCGTATGAAAA GCGCGCGGAG TGGGTGATTTC CCCCGCGCAC GGAGGTGTAAAGAGT TERM 240 206487 - 206457 - g 91 -9.6 -4.54727 | TGGCCGAAATCAAAA TCGACCCCCGCAAG ATC CGCGCGGCGATCGA GAAAATGGTGGAGCC TERM 241 206501 - 206531 + G 76 -6.8 -4.41348 | gap 1, overlap 206497 GAGAAAATGGTGGAG CC-GGGCCAGGGC GGTGGA GCCCTGGTCGAGG TTTCTTTCACCCCGC Daud_0181 206297 - 208735 + | ATPase Daud_0182 208909 - 210246 + | DNA repair protein RadA TERM 242 210586 - 210576 - g 71 -8.2 -3.90112 | TCCCGTCCAACGAAA CCGG AAT CCGG CACCGTACCGCCGAG Daud_0183 210269 - 211345 + | hypothetical protein TERM 243 211475 - 211457 - f 100 -16 -3.44444 | opp_overlap 211455 211454 TGAGAAATAGAGGAA GCACCGGC AGG GCCGGTGC GCGGTTTTTATTAGG Daud_0184 211711 - 212187 + | CarD family transcriptional regulator TERM 244 212190 - 212212 + F 90 -6.2 -5.18371 | opp_overlap 212203, overlap 212191 GATGTTTGCCTGAAG CGCTGGCG GAAGACG CGCCAGCC TTTTGTTTTGTAGGC TERM 245 212191 - 212211 + F 74 -9.7 -3.69938 | opp_overlap 212203, overlap 212190 ATGTTTGCCTGAAGC GCTGGCG GAAGACG CGCCAGC CTTTTGTTTTGTAGG Daud_0185 212313 - 213428 + | PilT domain-containing protein TERM 246 213506 - 213517 + G 70 -7.2 -4.07568 | opp_overlap 213495 213493, overlap 213495 AATACCGGCTGCTTG CCGG CCGC CCGG TTTTGGGCCGCACCC Daud_0186 213421 - 214605 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 247 214585 - 214597 + F 71 -10.5 -3.27951 | overlap 214583 CGGCGAATTGTTTTG CCCGG CGA CCGGG TGTTATAATGAGCTG TERM 248 214992 - 214978 - gf 76 -6.4 -4.41494 | CACGGGCAAGGAAAA GGGTAA GCG TCACCC CACCATCGGGGACAA Daud_0187 214640 - 215356 + | serine O-acetyltransferase TERM 249 215425 - 215459 + GF 81 -4.3 -4.9725 | gap 2, overlap 215423 215425 215427 ACCTGGGAAACGCCC G-GGC-GCTGGTGGTGT TCG ACACCATCCGCCGCTAC TTTTTGTATAAGGGT TERM 250 216572 - 216606 + GF 77 -7.9 -4.26076 | GCTCGAAGCCGGGGC GGT-GAGCGGCGACCTG TCC CAGGG-GCTGCTCGACC TTTTGATCGCGCTCC Daud_0188 215304 - 216740 + | cysteinyl-tRNA synthetase Daud_0189 217073 - 217810 + | thymidylate synthase, flavin-dependent TERM 251 218404 - 218416 + G 74 -9.1 -3.92324 | GTGGTCGGGGCCGAT CCGGA TGG TCCGG TTTCGTATTGGGACG Daud_0190 217870 - 218625 + | RNA methyltransferase Daud_0191 218622 - 219128 + | hypothetical protein Daud_0192 219240 - 219890 + | ECF subfamily RNA polymerase sigma-24 factor TERM 252 219998 - 219978 - f 71 -4.6 -4.63218 | opp_overlap 219978 219979, overlap 219979 TGGGTTTCAAGAAAA CGTCTCCC TTCAT GGGTGACA TTTTCTCAGACCGCT TERM 253 220049 - 220078 + F 77 -7.7 -4.2717 | opp_overlap 220042 GGCCAATAGCAAAGG GGAGCCGTAGTGG TTGA CAGCCGCGGCTCC TTTTGCTACCATAGT TERM 254 220108 - 220147 + F 86 -10.6 -4.07885 | gap 1, opp_overlap 220106 220108 220110 220111, overlap 220110 220110 TGATGCGCTACAAGA GACG-GACGGTGCCGGCCG CTC TGACCGGCCCCGTCCCGTG TTTTAGGCCGGCGTA TERM 255 220147 - 220108 - f 78 -12.1 -3.21924 | gap 1, opp_overlap 220108 220110 220110, overlap 220106 220110 220111 TGATGCGCTACAAGA GACG-GACGGTGCCGGCC GCTCT GACCGGCCCCGTCCCGTG TTTTAGGCCGGCGTA TERM 256 220144 - 220110 - f 95 -14.9 -3.17325 | opp_overlap 220108 220110 220110, overlap 220108 220106 220111 ATGCGCTACAAGAGA CGGACGGTGCCGGCC GCTCT GACCGGCCCCGTCCC GTGTTTTAGGCCGGC TERM 257 220110 - 220144 + F 79 -13.4 -2.78032 | opp_overlap 220110 220108 220106 220111, overlap 220108 220110 ATGCGCTACAAGAGA CGGACGGTGCCGGCCG CTC TGACCGGCCCCGTCCC GTGTTTTAGGCCGGC TERM 258 220110 - 220145 + F 89 -13.2 -3.63744 | gap 1, opp_overlap 220110 220108 220106 220111, overlap 220110 220108 ATGCGCTACAAGAGA CG-GACGGTGCCGGCCG CTC TGACCGGCCCCGTCCCG TGTTTTAGGCCGGCG TERM 259 220143 - 220111 - f 95 -18.4 -2.50074 | opp_overlap 220110 220110 220108, overlap 220110 220108 220106 TGCGCTACAAGAGAC GGACGGTGCCGGCC GCTCT GACCGGCCCCGTCC CGTGTTTTAGGCCGG TERM 260 220554 - 220570 + F 100 -9.4 -5.42198 | GCTACCAGTGCACAG CCAGCC GGCAA GGCTGG TTTTGTTTTTTGGGG Daud_0193 221050 - 221271 + | hypothetical protein Daud_0194 223201 - 221615 - | beta-lactamase domain-containing protein TERM 261 222071 - 222104 + g 75 -4.4 -4.67641 | gap 1, opp_overlap 222062 222046 GAAGTAGTGGTTCAA CCCGGCGAGCGGCGA ACCAC TCCCC-CACGCCCGG TTTTCGTTTTCCAGT TERM 262 222982 - 223002 + g 74 -4.7 -4.65895 | CCCGGCAAACATTCT GTAAGGACT GGA GGTCGTTAC TTTTTCCCTCGACAA TERM 263 225141 - 225151 + G 71 -5.4 -4.45399 | CGCTTTTCCAGTTCA TCCA ATT TGGA TTTTCCTGTTGATCT Daud_0196 224686 - 225639 + | abortive infection protein TERM 264 225803 - 225830 + F 75 -6.2 -4.54047 | opp_overlap 225803 ATAAATTCGATAAAG GAGCCGATATGC TGAG GAGTTTCGGCTC TTTTGTGTACAGTCG TERM 265 226460 - 226429 - g 85 -5.8 -4.9725 | opp_overlap 226429 226428, overlap 226430 226432 ATGCTCAGATAAAAA TCATTCCTTACGCT GTTG AGCGTCAGGAAAGG ATTTCGATGACTATG Daud_0198 226263 - 226502 + | hypothetical protein TERM 266 228121 - 228111 - g 75 -3.2 -4.87786 | GGAAGCCGAGAAAAA CAAC GAA GCTG CCCGTGTTTGGATCT Daud_0199 227092 - 230157 + | type III restriction enzyme, res subunit TERM 267 230465 - 230455 - g 90 -8.2 -4.8543 | CAAGGCTCAGAAAAA GGCC CAA GGCC CGCAGATCGATTTAT Daud_0200 230159 - 232849 + | DNA methylase N-4/N-6 domain-containing protein Daud_0201 234480 - 232909 - | transposase IS66 TERM 268 233958 - 233990 + g 81 -7.5 -4.43213 | overlap 233948 233947 GGCTTCCCGGCAGTA CCGCCGCCGGCATCG GGG CGGTGACGATGGGGG TTTTGATGTCTTCCC Daud_0202 234879 - 234523 - | IS66 Orf2 family protein Daud_0203 235181 - 234876 - | hypothetical protein TERM 269 235548 - 235532 - H 86 -6.5 -5.00616 | opp_overlap 235546 TGCTCTTGCAAAAAA CGCTCAG AGT CTCAGCG GGCCTGCGCCTCACG Daud_0205 235770 - 236036 + | prevent-host-death family protein Daud_0206 236033 - 236497 + | hypothetical protein Daud_0207 236872 - 238071 + | translation elongation factor Tu TERM 270 238088 - 238117 + F 93 -10.7 -4.4715 | opp_overlap 238079 238105 AAAGAAGGCCGAAGG GGTGGGGGCCT GATTAAGG GGGTCCCCACC TTTTGTGCCTTGACA TERM 271 238304 - 238288 - g 80 -5.8 -4.72127 | CAAGAACAAAAAGAA CGACCC CAACC GGATCG AGATGAAGAAATACT Daud_0208 238127 - 238363 + | ribosomal protein L33 Daud_0209 238388 - 238729 + | preprotein translocase, SecE subunit TERM 272 239023 - 239035 + G 71 -6.2 -4.38154 | TGGTGCGCAATACCC CCGG AGTCA CCGG TTTTGTGGGCAGTGT Daud_0210 238776 - 239312 + | NusG antitermination factor TERM 273 239316 - 239304 - f 76 -5.5 -4.70659 | overlap 239308 TTCCAGATTGAAAAA GTCAC CTA GCGAC AGGCTTCCGACCCAT Daud_0211 239357 - 239785 + | ribosomal protein L11 TERM 274 240284 - 240257 - g 86 -12 -4.19238 | TGCCCAACCCCAAAA CGGGCACCGTCA CTTT TGACATTGCCCG GGCGGTGGCCGAGGT Daud_0212 239833 - 240528 + | ribosomal protein L1 Daud_0213 240709 - 241236 + | ribosomal protein L10 TERM 275 241510 - 241498 - g 76 -6.3 -4.43477 | CGTAGGCAACGAAAA GATCA AGG TGATC AAGGTGGTCCGGGAA Daud_0214 241286 - 241666 + | ribosomal protein L7/L12 TERM 276 241712 - 241760 + F 70 -5.3 -4.49337 | gap 1, overlap 241719 AGAACGGAATCGCGG TAGTGAGTTGGAGCCCC-TTCC ACATAC GGCTTGGGGCTCCAATTTGCTG TTTTATGCATTATGC TERM 277 242047 - 242024 - f 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 278 242943 - 242953 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC TERM 279 242994 - 242983 - g 72 -4.4 -4.62441 | CCCGAGACAAACAAA CATC GCGA GATG GCCTTCGGGGGATTT Daud_0215 242044 - 243375 + | transposase, IS4 family protein TERM 280 245238 - 245226 - g 91 -6.9 -5.38054 | GTGGACAAAGAAAAA CGGCG GGT CACCG AAGAGATCGTATACC TERM 281 247202 - 247190 - g 81 -10.5 -4.12456 | opp_overlap 247190 247193, overlap 247178 247176 AGAGGAGCTCGAAAA GCCCC TGC GGGGC TTGTTCCCGCTGGTG TERM 282 247190 - 247202 + G 70 -10.5 -3.63991 | opp_overlap 247178 247176 247190, overlap 247193 AGAGGAGCTCGAAAA GCCCC TGC GGGGC TTGTTCCCGCTGGTG Daud_0216 243762 - 247313 + | DNA-directed RNA polymerase, beta subunit TERM 283 248542 - 248532 - g 84 -8.2 -4.46656 | CCCACAACATCAAAA GCGC CAA GCGC AAGGTGGAGCGGGTG Daud_0217 247379 - 250843 + | DNA-directed RNA polymerase, beta' subunit TERM 284 251188 - 251165 - f 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 285 252084 - 252094 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC TERM 286 252135 - 252124 - g 72 -4.4 -4.62441 | CCCGAGACAAACAAA CATC GCGA GATG GCCTTCGGGGGATTT Daud_0218 251185 - 252516 + | transposase, IS4 family protein TERM 287 252731 - 252705 - f 72 -3.6 -4.72272 | overlap 252706 252721 TGTCGGGACCAAAAA TGCTTACAACGC AAA ACGCTGAAAGCC CAAACAGCGTTGACA Daud_0219 252776 - 253060 + | ribosomal protein L7Ae/L30e/S12e/Gadd45 TERM 288 253063 - 253095 + F 79 -13.6 -2.82491 | CACGGAGGAGTAGCC ATTATCCCCTTACC ACCCG GGTAAGGGGATAAA TATGATAAATATGTA TERM 289 253248 - 253208 - g 91 -9 -4.62336 | gap 2, overlap 253209 253243 ACCGTAGCTCAAAAA TCG-GCCTC-GCCGGCACTC AGG GAGTGCCCGCAGAAGCGCGG GGTCTGCACGCGCGT TERM 290 253247 - 253209 - g 74 -12.5 -3.3692 | gap 2, overlap 253208 253243 CCGTAGCTCAAAAAT CG-GCCTC-GCCGGCACTC AGG GAGTGCCCGCAGAAGCGCG GGGTCTGCACGCGCG Daud_0220 253154 - 253528 + | ribosomal protein S12 Daud_0221 253542 - 254012 + | ribosomal protein S7 TERM 291 254923 - 254949 + G 72 -7.8 -4.14392 | overlap 254931 ACCGGCCGGGAGGAC CGGCGCGTGGCC CGG GACGACGAGCCG TTTTCGGCCTTGGCC TERM 292 255090 - 255073 - g 73 -3.4 -4.78981 | gap 1, overlap 255069 ACCAAGCAAAAGAAA GAG-CGG ATCGG CCGGCTC TTGCAAATGCACGCC Daud_0222 254029 - 256098 + | translation elongation factor G Daud_0223 256135 - 257337 + | translation elongation factor Tu Daud_0224 257358 - 257666 + | ribosomal protein S10 Daud_0225 257681 - 258322 + | ribosomal protein L3 TERM 293 258621 - 258584 - g 74 -9.7 -3.85698 | gap 1, opp_overlap 258593, overlap 258569 258570 CCCTGGCGCCAGAAA GGC-ACCGGGCGGGCCCG TCA CGGGACCATCCGTTCGCC GATCTGGCGCGGGGG Daud_0226 258380 - 259003 + | ribosomal protein L4/L1e Daud_0227 259003 - 259290 + | ribosomal protein L25/L23 Daud_0228 259320 - 260147 + | ribosomal protein L2 Daud_0229 260164 - 260448 + | ribosomal protein S19 Daud_0230 260462 - 260803 + | ribosomal protein L22 Daud_0231 260807 - 261463 + | ribosomal protein S3 Daud_0232 261466 - 261897 + | ribosomal protein L16 Daud_0233 261887 - 262090 + | ribosomal protein L29 TERM 294 262130 - 262116 - g 71 -5.6 -4.2803 | overlap 262117 CAGTGGAACGCAAAA GCCGCA AAG TGCGGA CCGGTAGGGTTGTGA Daud_0234 262103 - 262360 + | ribosomal protein S17 Daud_0235 262377 - 262745 + | ribosomal protein L14 TERM 295 262916 - 262929 + F 73 -5.2 -4.57073 | GGGACTGCGGAAATT GGGG ACGCCA CCCC TTTTTCCGGGAGCTA TERM 296 263005 - 262987 - f 76 -3 -5.00616 | opp_overlap 262989 262989, overlap 262972 262989 GTCGGCCCGAAAAAA TAGGGGAC TTG ACCCCCTT TTTCGGGCGGGCGCA TERM 297 262989 - 263003 + F 71 -4.2 -4.56597 | opp_overlap 262989 262987 262972, overlap 262989 CGGCCCGAAAAAATA GGGG ACTTGAC CCCC TTTTTCGGGCGGGCG TERM 298 263297 - 263280 - g 71 -8.3 -3.85698 | GCGCGGTGCCACAAA CCGACCC GCGT GGGACGG CGCATCCTGGACGAC Daud_0236 263040 - 263360 + | ribosomal protein L24 Daud_0237 263390 - 263932 + | ribosomal protein L5 Daud_0238 263946 - 264131 + | ribosomal protein S14 Daud_0239 264148 - 264543 + | ribosomal protein S8 Daud_0240 264572 - 265117 + | ribosomal protein L6 Daud_0241 265138 - 265509 + | ribosomal protein L18 Daud_0242 265528 - 266034 + | ribosomal protein S5 TERM 299 266127 - 266085 - g 76 -8.3 -4.10657 | gap 2, overlap 266106 TCACACTGGTGAAAA GCCTGATCGG-CCGGC-CCGA AAC CCAGCGCCGGACCGTCCGGGC CCTGGGACTCACCCG TERM 300 266133 - 266106 - g 74 -12 -3.53012 | gap 1, overlap 266085 TCGGCCGGCCCGAAA CCCAGCG-CCGGA CCG TCCGGGCCCTGGG ACTCACCCGGATGCA Daud_0243 266078 - 266233 + | ribosomal protein L30 Daud_0244 266246 - 266686 + | ribosomal protein L15 TERM 301 267721 - 267688 - g 77 -4.5 -4.90906 | gap 1, overlap 267689 267691 267692 CGACAACATCAAAAA GCAC-GGCGGCTTC ATCCCGG GAATCCGCCCGGGC CGCCCGACCGCCGAG TERM 302 267853 - 267863 + G 79 -8.2 -4.32034 | overlap 267851 267852 GAACGTGTACTTCGG GGGC ACC GCCC TTTTGATCGTGGTCG Daud_0245 266687 - 267961 + | preprotein translocase, SecY subunit Daud_0246 267966 - 268715 + | methionine aminopeptidase, type I Daud_0247 268797 - 269084 + | hypothetical protein Daud_0248 269075 - 269296 + | translation initiation factor IF-1 Daud_0249 269318 - 269431 + | ribosomal protein L36 Daud_0250 269445 - 269816 + | ribosomal protein S13 Daud_0251 269828 - 270214 + | ribosomal protein S11 Daud_0252 270226 - 270852 + | RNA-binding S4 domain-containing protein TERM 303 270908 - 270898 - g 85 -3.2 -5.24799 | TTAGAAATAGAAAAA CCGA AGA TCGA GTGCGTTGAGATGGA Daud_0253 270880 - 271827 + | DNA-directed RNA polymerase, alpha subunit TERM 304 272005 - 271991 - g 81 -4.2 -5.02074 | GTATCGCCGAAAAAA TGGTCA CCC TGGCCA AGCGGGGCGATCTGG Daud_0254 271852 - 272190 + | ribosomal protein L17 Daud_0255 272204 - 272956 + | tRNA pseudouridine synthase A TERM 305 272976 - 272964 - f 91 -7.7 -5.10208 | opp_overlap 272964 CAACCTGAACAAAAA GGTGT CTG ACACC TTTTGACTTTCCCTG TERM 306 272964 - 272976 + F 77 -7.7 -4.36595 | opp_overlap 272964 CAACCTGAACAAAAA GGTGT CTG ACACC TTTTGACTTTCCCTG TERM 307 272999 - 273025 + F 100 -14.6 -4.92239 | opp_overlap 273006, overlap 273006 TTTCCCTGACTTTAG GTAAAAAGGGGT CAG GCCCCTTTTTAC TTTTTGACTTTTTGG TERM 308 273018 - 273006 - f 75 -6.2 -4.66609 | opp_overlap 273006 272999 GACTTTAGGTAAAAA GGGG TCAGG CCCC TTTTTACTTTTTGAC TERM 309 273006 - 273018 + F 91 -6.9 -5.18355 | opp_overlap 273006, overlap 272999 GACTTTAGGTAAAAA GGGGT CAG GCCCC TTTTTACTTTTTGAC Daud_0256 273190 - 273651 + | SsrA-binding protein TERM 310 273910 - 273887 - f 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 311 274806 - 274816 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC TERM 312 274857 - 274846 - g 72 -4.4 -4.62441 | CCCGAGACAAACAAA CATC GCGA GATG GCCTTCGGGGGATTT Daud_0257 273907 - 275238 + | transposase, IS4 family protein TERM 313 275452 - 275427 - T 72 -4.1 -4.72272 | gap 1 TGTCGGGACCAAAAA TGCTTACAACGC AAA ACGCTGTAA-CA TTTCCCAAATATTGA TERM 314 275895 - 275912 + T 100 -11.3 -5.31072 | opp_overlap 275895 CCACCATGAACACAA CCGCTGA ACAT TCAGCGG TTTTTGTTGTGTTGT TERM 315 275912 - 275895 - T 79 -11.3 -3.72742 | opp_overlap 275895 CCACCATGAACACAA CCGCTGA ACAT TCAGCGG TTTTTGTTGTGTTGT Daud_0258 277105 - 276029 - | hypothetical protein Daud_0259 278834 - 277098 - | helicase domain-containing protein TERM 316 278010 - 278035 + g 73 -11.1 -3.64822 | CTGGACCACCTCGGC CCGGCGCCG GGAGTGGA TGGCGCCGG TTTCGCTGCGCCGGT Daud_0260 280335 - 279487 - | hypothetical protein Daud_0261 280973 - 280332 - | hypothetical protein TERM 317 280835 - 280788 - G 76 -12.9 -3.53012 | gap 3, opp_overlap 280826 TGCCCTGCCGGGAAA GCCGCCGCCGA-TACCGGCGCT TACGGCC AG-GCCG-TACCCGGCGGCGGC CAACGCCTTCGCCGT TERM 318 281938 - 281972 + G 81 -2.6 -5.10933 | opp_overlap 281949, overlap 281940 281941 CCACCACGGCAACGG GACCGAGGAGATCTTC TAT GAAGACCCCCGCGTGC TTTTCTTTTCAATCC Daud_0262 281372 - 282367 + | histone deacetylase superfamily protein Daud_0263 283995 - 282484 - | S-layer domain-containing protein TERM 319 284618 - 284604 - g 73 -3.4 -4.77173 | TTCCGAGAAAAGAAA GTACGG GCT CCGCTC TACGTGATGGTTTTC Daud_0264 284418 - 284879 + | CBS domain-containing protein Daud_0265 286317 - 284917 - | cation transporter Daud_0266 287708 - 286371 - | TrkA domain-containing protein TERM 320 286742 - 286785 + g 71 -5.9 -4.30576 | TGACCTTGGCGATGA CCTGCTTGGCCCCTAACTG CTTAGC CAATAAGGCGACGAGCAGG TTTTCCTCGTCCAGG Daud_0267 287862 - 288086 + | hypothetical protein TERM 321 288115 - 288144 + T 74 -10 -3.65224 | GGTATGGGGCCTGAA CGGGAGCTTCTC GTCAGG GGGAGGCTCCTG TTGTTCCCCTGGCAT Daud_0268 289918 - 288128 - | hypothetical protein TERM 322 289512 - 289477 - G 83 -11.8 -4.07568 | gap 1 TCGGGTGGTGCAAAA GGCGCCAGGCCGGGG TGTCCGG CCGCGGCC-AGCGCC CTGTGGGCTGCAAAC Daud_0269 290266 - 290048 - | hypothetical protein Daud_0270 290579 - 290286 - | hypothetical protein Daud_0271 291185 - 291937 + | UspA domain-containing protein TERM 323 292298 - 292326 + G 71 -8.2 -3.85389 | gap 1, overlap 292300 GATCAGGATCGTGGC GA-TGCTCAGCAC CCTG GTGCTGTGCACTC TTTACCTTGTTCCCC TERM 324 292350 - 292362 + G 91 -9.1 -4.63527 | GTTCCCCAAATGGTC GGTGC CGG GCACC TTTTTAAGCTCCTGC TERM 325 292671 - 292639 - g 74 -9.7 -3.84451 | overlap 292634 292633 292640 TGGCCCAAATGGAAA CGGCGGATGCCGCTG CCG CAGTCGCAACCGCCA GAGAGCAGATGCCCG TERM 326 293235 - 293272 + G 93 -14.2 -4.08394 | opp_overlap 293228, overlap 293216 GACCAGAACGTCGGC GTGCTCGTCGCGATGT GCTTCG GCATCGCGGCTAGCAC TTTTGCGCCGGCTCT Daud_0272 291930 - 293540 + | SSS family solute/sodium (Na+) symporter TERM 327 293605 - 293636 + F 80 -4.4 -5.03994 | gap 1, opp_overlap 293607, overlap 293606 293607 AACTCGATCCCTCAA TA-GCGTCCGGCG CCCCCCT TGCCGGACGCCTC TTTTTCTCTCTCCCA TERM 328 293606 - 293634 + F 83 -9.5 -4.14422 | opp_overlap 293607, overlap 293605 293607 ACTCGATCCCTCAAT AGCGTCCGGCG CCCCCCT TGCCGGACGCC TCTTTTTCTCTCTCC TERM 329 293633 - 293607 - f 76 -12.3 -3.03124 | opp_overlap 293606 293605 293607 CTCGATCCCTCAATA GCGTCCGGC GCCCCCCTT GCCGGACGC CTCTTTTTCTCTCTC TERM 330 293607 - 293633 + F 81 -13 -3.07568 | opp_overlap 293607, overlap 293606 293605 CTCGATCCCTCAATA GCGTCCGGCG CCCCCCT TGCCGGACGC CTCTTTTTCTCTCTC TERM 331 294091 - 294113 + G 82 -11.2 -4.07568 | GCTGGCGGTCTTCCT GGGGCTCCTG CTA CAGGCGCTCC TTTTCCAGCACGGCG TERM 332 294220 - 294254 + G 89 -12.6 -4.18506 | CCGCGGGGTGCCGCC CGCCCTGCGCGGCGCC CTC GGCGGCGGGCTGGCCG TTGTTTTGGCGGTGG TERM 333 294270 - 294280 + G 91 -5.4 -5.36965 | overlap 294263 294261 294260 TTGTTTTGGCGGTGG CACT GCT AGTG TTTTTTCTGGTCTTA Daud_0273 293759 - 294454 + | cobalamin (vitamin B12) biosynthesis CbiM protein Daud_0274 294436 - 295233 + | cobalt ABC transporter, inner membrane subunit CbiQ TERM 334 295308 - 295332 + G 74 -12.7 -3.28712 | GGAGTGTCCCTGGAG GCGCCGGCCGG GTC CCGGACGGCCC TTCTCGGAGCGAACG TERM 335 295698 - 295662 - g 79 -8.6 -4.30719 | gap 1 CTGGGCCAGAAGAAA CGGGCGGCCATCGCCGG GGTG CTGGCCATGGA-GCCCG ACCTCCTGGTGCTGG Daud_0275 295230 - 296042 + | cobalt ABC transporter, ATPase subunit TERM 336 296047 - 296087 + F 83 -7.7 -4.64334 | gap 1, opp_overlap 296052 ATGTAGATTGACATT CAAAATCCGGGTGTGATT ATGGCC ACTCAC-CCCGGATTCTG TTTTCTTCGGCGGTT TERM 337 296082 - 296052 - f 74 -6.9 -4.24204 | gap 1, opp_overlap 296047 GATTGACATTCAAAA TCCGGGTGTGATTA TGGC CACTCAC-CCCGGA TTCTGTTTTCTTCGG Daud_0276 296174 - 296956 + | short-chain dehydrogenase/reductase SDR Daud_0277 297800 - 297069 - | UBA/THIF-type NAD/FAD binding protein Daud_0278 298054 - 297806 - | thiamineS protein TERM 338 298080 - 298066 - R 73 -5.6 -4.57569 | opp_overlap 298065 298067, overlap 298054 298067 TCACTCCCTCAAAAA GGGGGA CAG TCCCCT ATTTTACCTTCTTTG TERM 339 298067 - 298079 + r 73 -9.1 -3.78677 | opp_overlap 298054 298066 298067, overlap 298065 CACTCCCTCAAAAAG GGGGA CAG TCCCC TATTTTACCTTCTTT TERM 340 298166 - 298132 - R 86 -10.7 -4.18018 | opp_overlap 298149 298163 CGCCTCCATGGAAAA CGGGTGAGGCCCC AAGACGGGG AGGACCCCACCCG TTCCCGGTTTCCCCG Daud_0279 299932 - 298193 - | aldehyde ferredoxin oxidoreductase TERM 341 298581 - 298557 - G 88 -8.5 -4.71828 | overlap 298574 AGCGGATCAACAAAA CCGCCCACCTT GAG AATGTTGGCGG CCACCGCATAACCGG TERM 342 298768 - 298717 - G 72 -7.2 -4.11216 | overlap 298752 GGGTCAGCCCGAAAA GCCTCCCCGCCGCCGCCGC-TCCT CCGCCC AGGATACGGCC-CAGCGGGGTGCC GTTGCGGACCTCGCG TERM 343 300076 - 300022 - R 95 -14.1 -3.53224 | gap 1, overlap 300023 CATCTCGGTTCCAAA GGTGACTCGGCTGCCCCCGGCGCCGG TACT CCGCCGGCGGGGGCAGCC-ACCCGGC ACATCGCTCGGCCGG TERM 344 300078 - 300023 - R 79 -13.9 -2.71791 | gap 2, overlap 300022 ATCTCGGTTCCAAAG GTGAC--TCGGCTGCCCCCGGCGCCGG TACT CCGCCGGCGGGGGCAGCCACCCGGCAC ATCGCTCGGCCGGAT TERM 345 300180 - 300154 - R 100 -10.8 -5.61596 | opp_overlap 300140, overlap 300140 300156 ACCGGGACAAAAAAA CAGCCCCGGC TTATTCC GCCGGGGCTT GGGCAAAAAACCATA TERM 346 300178 - 300156 - R 100 -13.4 -4.45201 | opp_overlap 300140, overlap 300140 300154 CGGGACAAAAAAACA GCCCCGGC TTATTCC GCCGGGGC TTGGGCAAAAAACCA Daud_0280 301915 - 300212 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 347 302235 - 302250 + r 71 -4.6 -4.57341 | opp_overlap 302224 302223, overlap 302230 302244 AAATCCCGAACGTTC CCGTGC AGGG GCGTGG TTTTTAACCCGCATT TERM 348 302312 - 302332 + r 74 -7.5 -4.15249 | TGAGGCCGGCTACCC CAGGATGTC CAA GACGACCTG TTTCATTTCCTCTTT Daud_0281 303802 - 302306 - | threonine synthase TERM 349 303733 - 303718 - G 71 -6 -4.28548 | opp_overlap 303725 ACTCAGGGACGAAAA GCCCCC CGTC GGGCGC GATGCCCAGCTTTAG TERM 350 303976 - 304000 + r 100 -13.7 -4.25256 | TATTTTCCTATGTTG TTCCACAAGCT TAG GGCTTGTGGAA TTCTTTTGGTGCGCC Daud_0282 305094 - 304147 - | 2-nitropropane dioxygenase, NPD TERM 351 304650 - 304701 + g 76 -5.7 -4.61527 | gap 2 TCGACCGCTCGGTAC CTAGGTGCC-CCCCGG-CGTCCCCG CTCT CGGCGACCACCGCCGCGGCCCCTAG TTTTTCGGCCATTTT TERM 352 305146 - 305158 + H 71 -4.9 -4.67982 | AAGCAGATGAAGAGC CATTT GGC AAATG TTTTCTTGAATCCAA Daud_0283 305370 - 306023 + | hypothetical protein Daud_0284 306119 - 306805 + | cell division ATP-binding protein FtsE TERM 353 306782 - 306810 + F 76 -12.6 -2.83641 | gap 1, opp_overlap 306781 306778 CGGGACGAAGAGCAG GGGAGTTACAGCC ATGG GGCT-TAACTCCC TGTGGTACTGCCTTC Daud_0285 306795 - 307682 + | hypothetical protein TERM 354 307745 - 307762 + F 70 -6.9 -4.11751 | overlap 307760 GACCGATCCGTGTTT CCGGAAG GAGG CTCCCGG TTTTGCGCCGTTCCT Daud_0286 307765 - 308889 + | peptidase M23B TERM 355 308916 - 308935 + F 100 -16.4 -3.36452 | opp_overlap 308911 308907 GCTAAAGTCACCGCG GGGCCGCC TCGG GGCGGCCC TTAGTCTTGCGCGGT Daud_0287 309018 - 310151 + | carboxyl-terminal protease TERM 356 310494 - 310524 + G 72 -11.8 -3.27704 | overlap 310490 310519 CTGTTTCGCTTACGG CGGCGGGGTGCTGG CCG TCAGCAACCTGCTG TTCGGTTTCCCGGAT TERM 357 310976 - 310996 + G 83 -11.8 -4.08692 | overlap 310957 CCCTGTCCGGAGGCG GGGCCGCT TGGCT GGCGGCCC TTTTCGCCCCGCTTG Daud_0288 310153 - 311400 + | PDZ/DHR/GLGF domain-containing protein Daud_0289 311593 - 311781 + | hypothetical protein TERM 358 312011 - 312029 + G 81 -11.6 -3.91897 | GCCCGGGGCCGAGGA GGACCGCC TGG GGCGGCCC TTTGTCGGTGCCGCC Daud_0290 311820 - 312443 + | phage SPO1 DNA polymerase-related protein Daud_0291 312727 - 312404 - | hypothetical protein TERM 359 312446 - 312461 + g 100 -6.8 -5.61881 | CGATTTGAGCTGACC GCCCAT GGAA GTGGGC TTTTTGTTTTTCAAC TERM 360 313255 - 313277 + G 78 -11.9 -3.78775 | opp_overlap 313251 313272 GCTTCCGAACAGGTC CGGGCCGGG GAACA CCAGGCCCG TTTCGTGGTGCGCAA Daud_0292 312823 - 314100 + | ABC-type sugar transport system periplasmic component-like protein TERM 361 314225 - 314239 + F 74 -8.6 -3.96148 | ACGTTTTCGAGCAGC CACAAC AAT GTTGTG TTTCTGGTCGGCCCA TERM 362 314664 - 314627 - g 84 -11.4 -4.1899 | gap 2 CCAGGCGATCGAAAA CCTGGT-CCGC-GGCC TAGAAAGG GGCCTGCGGCACCAGG TGCTGCTGGGGGTGA Daud_0293 314562 - 316586 + | excinuclease ABC, B subunit TERM 363 317896 - 317933 + G 93 -7.6 -5.03145 | gap 1, opp_overlap 317889 317890, overlap 317860 317900 GCGGAAAATCGATCG CCGAGGTGGCCGCGCTG TCGAT TACCGCGGCCGAC-CGG TTTTTTGCCGGCTTA Daud_0294 316620 - 319460 + | excinuclease ABC, A subunit TERM 364 319459 - 319484 + F 72 -11.3 -3.02293 | gap 1, opp_overlap 319465, overlap 319465 CCGCCGCCGAAGCCT G-AAAAAGGGGC CAG GCCCCTTTTTAC CTTCTTTGACTTTCG TERM 365 319477 - 319465 - f 95 -10.5 -4.62471 | opp_overlap 319459 319465 CCGAAGCCTGAAAAA GGGGC CAG GCCCC TTTTTACCTTCTTTG TERM 366 319465 - 319477 + F 100 -10.5 -4.8384 | opp_overlap 319465, overlap 319459 CCGAAGCCTGAAAAA GGGGC CAG GCCCC TTTTTACCTTCTTTG TERM 367 320702 - 320736 + G 70 -7.7 -4.07568 | overlap 320705 GTATGACATTTCCAA CCTCCAGGGCGCCCA GACGG TGGGCGTCATGGTCG TTTTCGAGGACGGCC Daud_0295 319518 - 321362 + | excinuclease ABC, C subunit TERM 368 321381 - 321360 - f 93 -15.9 -3.06501 | opp_overlap 321352 321362, overlap 321362 GACACTCCCACTGAA TAGCGGCCG GTTT CGGCCGCTA TTCAAACCTTGCCTT TERM 369 321379 - 321362 - f 91 -14.1 -3.08996 | opp_overlap 321352 321362, overlap 321360 CACTCCCACTGAATA GCGGCCG GTTT CGGCCGC TATTCAAACCTTGCC TERM 370 321362 - 321379 + F 91 -14.1 -3.04322 | opp_overlap 321362 321360, overlap 321352 CACTCCCACTGAATA GCGGCCG GTTT CGGCCGC TATTCAAACCTTGCC Daud_0296 321583 - 322392 + | Cof-like hydrolase TERM 371 322744 - 322715 - g 74 -9.1 -3.90744 | CTGGGCTGGAAAGAA GCGCCCCTGCGGG CCGA CCTGGAGGCGCGC CTTCAACTCCCCGTA Daud_0297 322436 - 323401 + | ROK family protein TERM 372 323835 - 323849 + G 74 -12.8 -3.25719 | GTGGCTGCACTCACC CCGCCC ACC GGGCGG TTGCTCCTGTGGTCC TERM 373 324696 - 324716 + G 78 -3.1 -5.02074 | overlap 324698 TTCGCCCGTTACGCT GAGGGGGGT TTG ATCCCCAAC TTTTTTCCGGACTCC Daud_0298 323685 - 325691 + | glycogen debranching enzyme, putative TERM 374 325753 - 325717 - f 100 -15.3 -4.64657 | opp_overlap 325729, overlap 325729 TGAAAGGGTGAAAAA GGTGTCAAAAAAGGTGT CAG ACACCTTTTTGGTCACC CGGGAGAGGAGAAAG TERM 375 325741 - 325729 - f 91 -7.7 -5.03747 | opp_overlap 325729, overlap 325717 AAAGGTGTCAAAAAA GGTGT CAG ACACC TTTTTGGTCACCCGG TERM 376 325729 - 325741 + F 86 -7.7 -4.72272 | opp_overlap 325729 325717 AAAGGTGTCAAAAAA GGTGT CAG ACACC TTTTTGGTCACCCGG TERM 377 325797 - 325785 - f 86 -7.7 -4.75174 | opp_overlap 325785 CAGGGAAGGTAAAAA GGTGT CAG ACACC TTTTTGGTATGGAGG TERM 378 325785 - 325797 + F 86 -7.7 -4.8048 | opp_overlap 325785 CAGGGAAGGTAAAAA GGTGT CAG ACACC TTTTTGGTATGGAGG Daud_0299 325824 - 326891 + | bifunctional phosphoglucose/phosphomannose isomerase TERM 379 326978 - 326990 + G 71 -5.5 -4.27584 | CGTACGATGTCTGGA GGACC TTG GGTTC TTTTGCGTTGACAAT Daud_0300 326904 - 327788 + | hypothetical protein Daud_0301 327899 - 328846 + | hypothetical protein TERM 380 329333 - 329296 - g 78 -15.5 -2.70932 | gap 1 CGGGGTGTTCAAGGA CGCCGCCCGGGCCGGAGG CCA CCTCCGGGCC-GGTGGCA GGAAGGTGATCATCA Daud_0302 328967 - 330004 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 381 330524 - 330537 + G 74 -9.5 -3.92324 | ATCGCCGCTCACCTT CCGGC CGTC GCCGG TTTGCTCTTGGAGAG TERM 382 330885 - 330863 - g 73 -3.2 -4.67904 | overlap 330865 GAGCAACCCGAAAAA CGCGCGACCG TAG CGGTGGAGAG CATCCCCGCGGGCTG Daud_0303 330032 - 331213 + | phosphoglycerate kinase Daud_0304 331224 - 331997 + | Triose-phosphate isomerase TERM 383 332242 - 332265 + G 100 -8 -5.40072 | opp_overlap 332244, overlap 332244 AGATCTGACCCGAAT CACCCGTGCC GTCA GGGACGGGAG TTTTTTTGAAAACGC TERM 384 332734 - 332759 + G 73 -3.3 -4.68103 | gap 1, overlap 332740 TGGCCGGCCGGTCGC CCAGGTGCGT GACGGGG ACGCGC-TGG TTTTCTTCAACTTCC Daud_0305 331994 - 333523 + | phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent TERM 385 333673 - 333661 - f 85 -6.9 -4.8384 | opp_overlap 333661 CAAAGAAGGTAAAAA GGGGC CTG ACCCC TTTTCGAATTCGTAC Daud_0306 333705 - 334988 + | phosphopyruvate hydratase Daud_0307 335092 - 335322 + | preprotein translocase, SecG subunit TERM 386 336916 - 336891 - g 72 -7.5 -4.15788 | opp_overlap 336892, overlap 336878 336892 AACGCCTTGAAGAAA GCGTCCGCA GGGGCCGG TGCGGCCGC GGAATACGTCTTCAA TERM 387 337171 - 337182 + G 71 -5.8 -4.31692 | overlap 337159 TTCCCGGGCTGATCC CGGT CGTT ACCG TTTTGCTGGTCGGTT Daud_0308 335442 - 337490 + | V-type H(+)-translocating pyrophosphatase TERM 388 337521 - 337541 + F 100 -19.7 -4.2349 | opp_overlap 337521 TGGCACGTAACGAAA GCCCCCGCG GAA CGCGGGGGC TTTTCAATGTACGCA TERM 389 337541 - 337521 - f 100 -19.7 -3.93288 | opp_overlap 337521 TGGCACGTAACGAAA GCCCCCGCG GAA CGCGGGGGC TTTTCAATGTACGCA TERM 390 337819 - 337836 + F 70 -2.7 -4.8048 | GATTAGTCAAACGGT TAGTAAG AAAG CGTACTA TTTTTGGTATAAGAG TERM 391 338294 - 338278 - g 100 -10.1 -5.00616 | TCCCTGCTTAAAAAA CCGGCTC CCG GAACCGG GGCGAAGTCCGCGGA Daud_0309 337882 - 338841 + | hypothetical protein TERM 392 338869 - 338899 + T 95 -15.4 -3.36823 | opp_overlap 338861 338879, overlap 338862 AAAAAGCTGGGAAGG TGCGGGAACAGCGC TTG GCGGTGTTCCCGCC TTCGGTTTTCGGGGG Daud_0310 339837 - 339010 - | ABC-transporter-like protein, periplasmic substrate-binding protein Daud_0311 340253 - 339837 - | PadR-like family transcriptional regulator TERM 393 339892 - 339910 + g 82 -3 -5.14525 | overlap 339896 339897 AAGAGTTCCCGGTAC TGGCGGAG AAA CTGCTCCA TTTTCTCTTTTTTTT TERM 394 339897 - 339917 + g 100 -6.9 -5.75342 | overlap 339896 339892 TTCCCGGTACTGGCG GAGAAACTG CTC CATTTTCTC TTTTTTTTCCCGCAG TERM 395 341558 - 341592 + G 70 -7.8 -4.07687 | gap 1, overlap 341551 341587 AACGTCTTGCTGCCG CGGGCGCTGGTTGGC CGCACC GCCA-CGAGCGCCGG TTTTACAAACGGCGT Daud_0312 340457 - 341650 + | arsenite-activated ATPase ArsA Daud_0313 341637 - 341936 + | hypothetical protein Daud_0314 341966 - 342493 + | appr-1-p processing domain-containing protein TERM 396 342565 - 342555 - f 74 -8.2 -3.97368 | opp_overlap 342555 TGTGTAAGTTACAAA CCCG GGG CGGG ACCCCTTGGGTTTCT Daud_0316 343301 - 343429 + | hypothetical protein TERM 397 343420 - 343408 - f 100 -4.8 -5.76949 | CATCCTTAAAAAAAA GACC AACTG GGTC CTGAAGTAACCGTCC Daud_0317 343438 - 343863 + | hypothetical protein Daud_0318 343963 - 344682 + | nitroreductase Daud_0319 345664 - 345236 - | PilT domain-containing protein Daud_0320 345914 - 345630 - | hypothetical protein TERM 398 345921 - 345888 - GH 71 -9.7 -3.54408 | opp_overlap 345894, overlap 345884 GCGTACCGAAATGAA CTCCAATGTGGTCAC CTCC ATGACCACATTATAG TATCGAGAAAGCTTT TERM 399 346007 - 346027 + G 74 -4.6 -4.63218 | opp_overlap 346007 346008, overlap 346008 AGCGGTCTGAGAAAA TGTCACCC ATGAA GGGAGACG TTTTCTTGAAACCCA Daud_0321 345973 - 347361 + | integrase catalytic subunit TERM 400 348562 - 348598 + F 100 -13.2 -4.66537 | opp_overlap 348562 348564, overlap 348565 TAAGGCCGCAGGCAA GACCTTCATGCCGAAG TTTGT TTTTGGTATGAAGGTC TTTTATATTACCGCC TERM 401 348565 - 348577 + F 74 -3.4 -4.94262 | opp_overlap 348564 348562, overlap 348562 GGCCGCAGGCAAGAC CTTC ATGCC GAAG TTTGTTTTTGGTATG TERM 402 348792 - 348770 - f 78 -6.8 -4.62783 | opp_overlap 348786, overlap 348771 CACGCATTTCAAAAA GCAGCCTACC GCA GGCTGGCGGC GGCCATCATTCTCCG TERM 403 349069 - 349046 - f 93 -12.4 -4.2528 | opp_overlap 349045 349044, overlap 349021 TCGGAACCCAAGAAA GGAGCAGGGC GTCA GTCCTGCTCC GCTTTCAGCGAAACA Daud_0323 349096 - 349608 + | membrane-bound metal-dependent hydrolase TERM 404 349744 - 349758 + G 77 -2.7 -5.00616 | overlap 349745 TCGAGGGCCTGCGGA AGCCC GGTCG GGGCC TTTTTTCAGAAAAGG Daud_0324 349605 - 349802 + | hypothetical protein Daud_0325 350814 - 349852 - | ADP-ribosylation/crystallin J1 TERM 405 351091 - 351079 - H 71 -4.8 -4.67353 | CGACCTACTGAAAAA GGCT GTCGG AGCC GAGGCAATCCAACTG TERM 406 351634 - 351620 - g 81 -12.8 -3.72695 | ACCGGCGCGACGAAA CGGCGG TGA CCGCCG AACTGACGGTGCGGT Daud_0327 351406 - 351816 + | thioesterase superfamily protein Daud_0328 351849 - 352502 + | metal dependent phosphohydrolase TERM 407 352617 - 352605 - g 83 -4.7 -5.00616 | CTTCGCCGTAAAAAA GAGCG GTG CGCGC GGCTTCAAGAAGCTG Daud_0329 352510 - 354630 + | ribonuclease R TERM 408 354746 - 354786 + F 79 -12.5 -2.88268 | opp_overlap 354760, overlap 354760 TGCCGGACGGCTTAC CACGCCCCCAAAAAGGGGC CAG GCCCCTTTTTCGGAGAGGG ATGTTTTCCTTGACA TERM 409 354760 - 354772 + F 95 -10.5 -4.56597 | opp_overlap 354760, overlap 354746 CCACGCCCCCAAAAA GGGGC CAG GCCCC TTTTTCGGAGAGGGA TERM 410 354772 - 354760 - f 95 -10.5 -4.57569 | opp_overlap 354746 354760 CCACGCCCCCAAAAA GGGGC CAG GCCCC TTTTTCGGAGAGGGA Daud_0330 354892 - 355329 + | ribosomal protein L13 Daud_0331 355348 - 355740 + | ribosomal protein S9 TERM 411 355749 - 355798 + F 77 -7.2 -4.26344 | gap 1, opp_overlap 355750, overlap 355750 GCGCTAAGCACATAA T-CCCTCCTCGGCACGCATATTC CTTGA GAGAATGCGTCTTGAGGGGGGTA TTTTCATGCCGGTCT TERM 412 355750 - 355796 + F 83 -12.3 -3.7331 | opp_overlap 355750, overlap 355749 CGCTAAGCACATAAT CCCTCCTCGGCACGCATATTC CTTGA GAGAATGCGTCTTGAGGGGGG TATTTTCATGCCGGT Daud_0332 355804 - 356595 + | N-acetylmuramoyl-L-alanine amidase TERM 413 356859 - 356872 + F 78 -5.9 -4.70879 | opp_overlap 356859, overlap 356840 356868 356869 TTTTCTGCAAGCAAA CGCCG TTAG TGGCG TTTTTGCCGTTTGGG Daud_0333 357002 - 357277 + | hypothetical protein Daud_0334 357287 - 357619 + | hypothetical protein Daud_0335 358480 - 357635 - | hypothetical protein TERM 414 358692 - 358728 + G 70 -12.2 -3.17051 | gap 1, overlap 358695 CTGACCCTGACGGTG GCGGAGTCCGCCCGGCA CGGA TTCCGGGCGGGG-CCGC TCTTAGTCCTGGGGC TERM 415 359071 - 359093 + G 76 -5.5 -4.56597 | gap 1, opp_overlap 359056, overlap 359071 CCCTCTCCCTGGAGC GG-GGTCCGG CCGG CCTGACCGCC TTTTTCACCGGCCAC Daud_0336 358605 - 359282 + | lysine exporter protein LysE/YggA TERM 416 360338 - 360290 - g 83 -11.6 -4.08767 | gap 1, opp_overlap 360327 360331, overlap 360294 GCCACTGCCGCAAAA CCGAGCCGCCCGAAC-CGGGCGA CGTC CCGCCCGAGTTCCAGCGTTCCGG GGGGACGTTCGTTTC TERM 417 360312 - 360294 - g 72 -13.8 -2.74605 | overlap 360290 CTGCCGCAAAACCGA GCCGCCCG AAC CGGGCGAC GTCCCGCCCGAGTTC Daud_0337 359326 - 360738 + | extradiol ring-cleavage dioxygenase III subunit B TERM 418 361152 - 361176 + G 71 -5 -4.41348 | gap 1, opp_overlap 361125, overlap 361125 361155 GATCGCCTACACGTA CTCCGAACCAG TGGT CTGGTACG-AG TTTGTTTACGAGACG Daud_0338 360769 - 361815 + | radical SAM domain-containing protein Daud_0339 361887 - 362927 + | N-acetyl-gamma-glutamyl-phosphate reductase Daud_0340 363117 - 364340 + | arginine biosynthesis bifunctional protein ArgJ Daud_0341 364368 - 365285 + | acetylglutamate kinase TERM 419 365296 - 365308 + F 83 -6.2 -4.8384 | opp_overlap 365296 CTTAATTAAAAAAAA GGGG CCAGA CCCC TTTTTACCTTCTTTG TERM 420 365308 - 365296 - f 100 -6.9 -5.95166 | opp_overlap 365296 CTTAATTAAAAAAAA GGGGC CAG ACCCC TTTTTACCTTCTTTG Daud_0342 365321 - 366574 + | acetylornithine and succinylornithine aminotransferase TERM 421 366702 - 366676 - g 70 -10 -3.66654 | GACCTGAAGCGTAAA CAGCGGGCCGGC GAG GCCCATCCGCTG TGCGCCGGCAAAACC Daud_0343 366577 - 367506 + | ornithine carbamoyltransferase TERM 422 368575 - 368565 - g 71 -8.2 -3.9534 | overlap 368566 ACCGAGACCCAGAAA CCGG TCA CCGG CCGCGTGCGGTTGAA Daud_0344 367569 - 368768 + | argininosuccinate synthase TERM 423 369670 - 369645 - g 81 -2.6 -5.18726 | gap 1 GCCCCAGAAGAAAAA CCCGGA-CA TGGCCGAAC TGATCCGGG GCAAGTCGGGCCGGG Daud_0345 368791 - 370170 + | argininosuccinate lyase TERM 424 370186 - 370227 + F 100 -13.7 -5.40072 | gap 1, opp_overlap 370165 370189, overlap 370189 TCCGGCCCGGTTTAC GAACCGGCCTAC-TCACTGC CCC GCAGTGACGACGGCCGGGTC TTTTTTTCGGAGCCC TERM 425 370189 - 370224 + F 95 -14 -3.19966 | gap 1, opp_overlap 370165 370189, overlap 370186 GGCCCGGTTTACGAA CCGGCCTAC-TCACTGC CCC GCAGTGACGACGGCCGG GTCTTTTTTTCGGAG TERM 426 370224 - 370189 - f 91 -14 -3.14132 | gap 1, opp_overlap 370189 370186, overlap 370165 GGCCCGGTTTACGAA CCGGCCTAC-TCACTGC CCC GCAGTGACGACGGCCGG GTCTTTTTTTCGGAG TERM 427 370732 - 370778 + G 73 -6.3 -4.25104 | gap 1, opp_overlap 370762 GCCGGCGTCATTTCT CGCGCCGCCGACTACCGGCGAC GGGA GATACCGCT-GACGGCGGGGCG TTTTGATACCGGCAC Daud_0346 370471 - 371016 + | ECF subfamily RNA polymerase sigma-24 factor TERM 428 371172 - 371152 - g 79 -13.9 -3.53012 | opp_overlap 371155 371166, overlap 371137 CGCGGCCCCGGCAAA CGGGCGCCG CCG CGGCGGCCG GCGGACAGGCGGTGC TERM 429 371675 - 371651 - g 89 -14.3 -3.86252 | GGCGACGAAACACAA CCGTCTCCGCC CCC GGCAAAGACGG TGACGCACGAACAGG Daud_0347 371000 - 372967 + | hypothetical protein TERM 430 372992 - 373013 + T 88 -10.1 -4.52589 | gap 1, overlap 372993 GTGTACTTCCGAAGC G-CCCCCGGG TCA TCCGGGGGTC TTTTCTGTGCGGCCG TERM 431 372993 - 373011 + T 93 -13.8 -3.87627 | overlap 372992 TGTACTTCCGAAGCG CCCCCGGG TCA TCCGGGGG TCTTTTCTGTGCGGC Daud_0348 374891 - 373245 - | inorganic diphosphatase TERM 432 375008 - 374986 - R 72 -4.1 -4.82901 | gap 1, opp_overlap 374968 374988, overlap 374987 374988 CGGCGGCGATAAAAA GCCCTGCCCC TTTA GGAACAGG-C TGTTCTCACTGAGTC Daud_0349 375483 - 375163 - | branched-chain amino acid transport Daud_0350 376181 - 375465 - | AzlC family protein TERM 433 376634 - 376680 + H 95 -11.7 -4.42464 | gap 1, overlap 376635 376637 GGTACCGCGCGAGCG TA-GCCTCTCGTCCCTGGCAGT TGTG GCTGCCACGGACCAGAGGTGTA TTTGTTTCCGGGATT TERM 434 376635 - 376678 + H 86 -12.4 -3.81557 | overlap 376634 376637 GTACCGCGCGAGCGT AGCCTCTCGTCCCTGGCAGT TGTG GCTGCCACGGACCAGAGGTG TATTTGTTTCCGGGA TERM 435 376637 - 376676 + H 100 -17.2 -3.48884 | overlap 376635 376634 ACCGCGCGAGCGTAG CCTCTCGTCCCTGGCAGT TGTG GCTGCCACGGACCAGAGG TGTATTTGTTTCCGG Daud_0351 376732 - 377613 + | branched-chain amino acid aminotransferase TERM 436 377637 - 377625 - f 91 -7.7 -4.98616 | opp_overlap 377625, overlap 377619 CTAAAAGACTAAAAA GGTGT CAG ACACC TTTTTTCACAATATC TERM 437 377625 - 377637 + F 91 -7.7 -5.04385 | opp_overlap 377625 377619 CTAAAAGACTAAAAA GGTGT CAG ACACC TTTTTTCACAATATC Daud_0352 377733 - 379403 + | acetolactate synthase, large subunit, biosynthetic type Daud_0353 379446 - 379943 + | acetolactate synthase, small subunit TERM 438 380050 - 380064 + F 76 -3.4 -5.06414 | TCGGGAGACCCTAGC GGGGGG AGA CTCACC TTTTTGTTGCGGGAG Daud_0354 380090 - 381115 + | ketol-acid reductoisomerase TERM 439 381158 - 381144 - f 73 -5.6 -4.66163 | opp_overlap 381145, overlap 381121 381145 ACCCCGACTGAAAAA GGGGGT CAG ACCCCT TTTTCGGGGCCCCTT TERM 440 381145 - 381157 + F 89 -9.1 -4.56775 | opp_overlap 381144 381121 381145 CCCCGACTGAAAAAG GGGGT CAG ACCCC TTTTTCGGGGCCCCT Daud_0355 381374 - 382903 + | 2-isopropylmalate synthase TERM 441 382929 - 382941 + F 95 -10.5 -4.64144 | opp_overlap 382929 382923, overlap 382940 CAGGGAAAGTAAAAA GGGGC CTG GCCCC TTTTTGGAGGTTGTT TERM 442 382941 - 382929 - f 100 -10.5 -5.00138 | opp_overlap 382929 382940, overlap 382923 CAGGGAAAGTAAAAA GGGGC CTG GCCCC TTTTTGGAGGTTGTT Daud_0356 382961 - 384223 + | 3-isopropylmalate dehydratase, large subunit Daud_0357 384226 - 384720 + | 3-isopropylmalate dehydratase, small subunit Daud_0358 384755 - 386347 + | 2-isopropylmalate synthase/homocitrate synthase family protein TERM 443 386338 - 386353 + F 100 -11.8 -5.30575 | opp_overlap 386321 TGCACCCGACGCCCA GGCGCC GTGA GGCGCC TTTTTTCCATTTTTA TERM 444 387055 - 387019 - g 73 -8.5 -4.07568 | overlap 387020 TTGCGGGGCTGAAAA TCGTGGTGGACTGCGCC AAC GGCGCCGCCTACCAGGT GGCGCCCCAGGTGCT Daud_0359 386487 - 387845 + | phosphoglucosamine mutase TERM 445 388073 - 388056 - f 100 -14.1 -4.37658 | AACGGCGCCACAAAA CCGCGGG GTGA CCCGCGG GACAAAAGCGCCCGG TERM 446 388180 - 388202 + F 78 -7 -4.64992 | gap 1 GCGGCACGACTTTTT GGACCGCGC TTTGTT GC-CGGTCC TTTCTATTTTTTAGA TERM 447 389347 - 389331 - g 79 -9.3 -4.16943 | TGCGAGAGGCGAAAA GCCGCGG CGC CCGCGTC GTGGCGATCACCAAC Daud_0360 388238 - 390067 + | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 448 390183 - 390203 + F 100 -13.3 -4.46615 | opp_overlap 390177 390174 AAAACATGAGGTTAA GGGGCTACT CGG AGTGGCCCC TTTTCATTACTGCTG TERM 449 390573 - 390561 - g 70 -10.5 -3.56092 | TCATCAGTCTGCAAA CCGCC TTT GGCGG CGGTAAGACGCACAC TERM 450 392338 - 392306 - g 93 -7.6 -5.09173 | gap 2, overlap 392307 GAAGACCTGAAAAAA CGCCTTGAGGCGGCCC GGC GGGCCGCC-CT-GGAG ACTCTGGGTCCTGCC Daud_0361 390308 - 393169 + | hypothetical protein Daud_0362 393674 - 394018 + | hypothetical protein Daud_0363 394413 - 393994 - | hypothetical protein Daud_0364 394856 - 394410 - | DNA polymerase beta subunit Daud_0366 395872 - 395366 - | hypothetical protein Daud_0367 396416 - 395862 - | hypothetical protein TERM 451 396131 - 396152 + g 76 -9.3 -4.01603 | TTTCTGCCAGGTCCA GCGTCGCCG TGAC CGGCGGGGC TTTAATGTTTAACTG Daud_0368 396883 - 396593 - | hypothetical protein TERM 452 396712 - 396687 - G 100 -5.4 -5.65927 | opp_overlap 396687 396690, overlap 396690 CACGTAAATAAAAAA GAACACTCCC GTTGCA GGGAATGGTC TGTTTCTGATGATAA TERM 453 396709 - 396690 - G 82 -5.7 -4.88687 | opp_overlap 396687 396690, overlap 396687 GTAAATAAAAAAGAA CACTCCC GTTGCA GGGAATG GTCTGTTTCTGATGA TERM 454 397046 - 397078 + G 72 -4.1 -4.56597 | gap 3, overlap 397047 397048 GATGCACCGCCTGCC G-CCCCG--GCGCCGG ATGA CCGGCGCTACGGGTTC TTTTTCGACAGCACC TERM 455 397048 - 397075 + G 95 -11.3 -4.40561 | gap 2, overlap 397047 397046 TGCACCGCCTGCCGC CCCG--GCGCCGG ATGA CCGGCGCTACGGG TTCTTTTTCGACAGC TERM 456 397475 - 397514 + G 70 -9.8 -3.64703 | gap 1, overlap 397476 GCCTGTGTCACGTCC TGCCCGTACGGGGCCCTGC TGG GT-GGGCCCCGGGCGGCCC TTTGGGTCACGGCCA Daud_0369 396914 - 397660 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_0370 397719 - 398168 + | hypothetical protein TERM 457 398221 - 398207 - T 74 -4.2 -4.82901 | GGCCCGCCAGAAAAA TGGTTG TTG CCACCA AAAATAATTCCCGGT TERM 458 398518 - 398541 + T 70 -3 -4.8048 | gap 1, overlap 398498 398537 GCGCAACGACATTGA CCTG-GCCGTC TTG GCTGGCGCGGG TTTTTCCTATCCCGC TERM 459 399069 - 399091 + T 74 -6.9 -4.25283 | overlap 399067 399064 TTACGAGCGGCTGCG CGGTGCGGG TGGTT TCCGCAACG TTTTGGTACACGAAT Daud_0373 400896 - 399382 - | L-lactate permease TERM 460 401167 - 401177 + r 76 -5.4 -4.78572 | overlap 401165 ACCGGGACGAGGCGG GTGA CAC TCAC TTTTGTTGGTTCAAA Daud_0375 402722 - 402309 - | PilT domain-containing protein TERM 461 402416 - 402432 + g 93 -2.2 -5.626 | GTGCGGCAAGGTAAG CGTCTA CGAAA TCGACG TTTTTTTCTGCCATA Daud_0376 402988 - 402722 - | AbrB family transcriptional regulator TERM 462 403910 - 403866 - g 76 -8.4 -4.11216 | overlap 403870 TGCTGATGCCCAAAA CCGACCTGGCG-GCGGCGCTCG CCG CG-GCGGAGCGCGCCAGGGAGG CGTGGCTGGCCCACC Daud_0377 403178 - 404122 + | response regulator receiver modulated diguanylate cyclase Daud_0378 404522 - 404199 - | hypothetical protein TERM 463 404554 - 404572 + r 81 -13.1 -3.05844 | ACCACGACTTTGTTC CGGCCGG CTCGT CCGGCCG TGTTGACCTGCCCAA TERM 464 404634 - 404598 - R 85 -13.1 -3.6106 | opp_overlap 404605, overlap 404599 404605 CCCAAGACGCTCAAA CCCAAAACGCCTCCC TGAGCGC GGGAGGCGTTTTCGA TCGCCCATGGGGGTC TERM 465 404633 - 404599 - R 83 -14.4 -2.76315 | opp_overlap 404605, overlap 404598 404605 CCAAGACGCTCAAAC CCAAAACGCCTCCC TGAGCGC GGGAGGCGTTTTCG ATCGCCCATGGGGGT TERM 466 404627 - 404605 - R 93 -12 -4.35524 | opp_overlap 404605, overlap 404599 404598 CGCTCAAACCCAAAA CGCCTCCC TGAGCGC GGGAGGCG TTTTCGATCGCCCAT TERM 467 404605 - 404627 + r 91 -12 -4.18197 | opp_overlap 404605 404599 404598 CGCTCAAACCCAAAA CGCCTCCC TGAGCGC GGGAGGCG TTTTCGATCGCCCAT TERM 468 404719 - 404747 + r 95 -12.3 -4.45738 | CCCGCGTCATCGGCA CCCGTCCAGGGCG GCT TGCCCTTGCCGGG TTTCTTCTTACCGTC Daud_0379 406196 - 404865 - | glutamyl-tRNA(Gln) amidotransferase, B subunit Daud_0380 406736 - 408358 + | hypothetical protein TERM 469 409512 - 409530 + G 70 -7.3 -4.08216 | overlap 409513 TTTTGGCCCGGACCA CCGGCCG TTACC CGGCCGA TTTTGACCCCGGTAC Daud_0381 408368 - 409579 + | hypothetical protein TERM 470 409754 - 409738 - g 74 -2.2 -4.85599 | gap 1, opp_overlap 409740, overlap 409739 409740 TGGACGGCAGAAAAA GCCC-GG ACCG CCTGGAC CCGTTCGGTTCCCGG TERM 471 410700 - 410678 - g 71 -5.5 -4.25104 | gap 1, overlap 410644 410679 GGGGCTGGAGCAAAA GC-GGCGGAC CGAG GTCCGGCTGC GCCGGGAGATCGATG TERM 472 411550 - 411560 + G 77 -2.4 -5.00616 | ACCGGGTGCTCGAGC CCGC GCC GCAG TTTTTTGCCCACACA TERM 473 412878 - 412889 + G 72 -7.2 -4.21194 | GAGTACGACGGCAAG CGGG TCAG CCCG TTTTACGTGCTGGAC Daud_0382 409566 - 413780 + | hypothetical protein TERM 474 414820 - 414856 + G 74 -5.7 -4.44667 | overlap 414802 414816 GGCTGTTGTTCCGGC CGCCTCGTTCGGCCG TGTTGAC CGGCCCAAAGTGGTG TTTGTTGTTGAGAAC Daud_0383 413951 - 415294 + | hypothetical protein TERM 475 415703 - 415693 - T 71 -4.6 -4.56597 | GGGCGCCTGGAAAAA GACG TCC CGCC TTACACAACTCTGAC TERM 476 415990 - 415941 - T 73 -9.4 -3.83226 | gap 1, opp_overlap 415950, overlap 415950 AACGACTGAGAACAA GTGATACAACGAGACACCTCCCG TTGCC CGGAAGGTGTCTCGTTG-ATGGT GCCGGATTCAGGTTA TERM 477 415982 - 415950 - T 100 -20 -3.57629 | opp_overlap 415950, overlap 415941 GAACAAGTGATACAA CGAGACACCTCCCG TTGCC CGGAAGGTGTCTCG TTGATGGTGCCGGAT TERM 478 415950 - 415982 + T 100 -17.8 -3.21218 | opp_overlap 415950 415941 GAACAAGTGATACAA CGAGACACCTCCCG TTGCC CGGAAGGTGTCTCG TTGATGGTGCCGGAT Daud_0384 416628 - 416008 - | copper amine oxidase domain-containing protein TERM 479 416239 - 416293 + g 71 -5.7 -4.25104 | gap 2, overlap 416235 GTTGATGCTCTTGGG CGGCACGTCCGGGCCGTCGATCTTGAC GTC GTTAAAGTAGAAGGC-CGG-CATGCCG TTTTCGTCCAGAGCA Daud_0385 417073 - 416762 - | hypothetical protein TERM 480 417287 - 417333 + H 75 -6.5 -4.39166 | opp_overlap 417294 417297 417298, overlap 417298 ATCTAAAACAGAGTG GAAAAAAGAAGGCCACGGAGG TGCTT CCTCCGTGGCTTTTCCCATTC TTTTGCTCTCTCAAG TERM 481 417326 - 417294 - H 100 -12 -5.08169 | opp_overlap 417287 417298, overlap 417297 417298 ACAGAGTGGAAAAAA GAAGGCCACGGAGG TGCTT CCTCCGTGGCTTTT CCCATTCTTTTGCTC TERM 482 417323 - 417297 - H 100 -13.7 -4.63089 | opp_overlap 417287 417298, overlap 417294 417298 GAGTGGAAAAAAGAA GGCCACGGAGG TGCTT CCTCCGTGGCT TTTCCCATTCTTTTG TERM 483 417322 - 417298 - H 100 -17.2 -3.36769 | opp_overlap 417287 417298, overlap 417297 417294 AGTGGAAAAAAGAAG GCCACGGAGG TGCTT CCTCCGTGGC TTTTCCCATTCTTTT TERM 484 417298 - 417322 + H 100 -17.2 -4.26634 | opp_overlap 417298 417297 417294, overlap 417287 AGTGGAAAAAAGAAG GCCACGGAGG TGCTT CCTCCGTGGC TTTTCCCATTCTTTT TERM 485 417781 - 417800 + G 76 -5.6 -4.66163 | gap 1, overlap 417782 CGTCTGGGTGCCCTT GCGGGG-GC CTC GCTCCCCGG TTTTTGGCTGGGGCT Daud_0386 417361 - 418299 + | binding-protein-dependent transport systems inner membrane component TERM 486 418391 - 418360 - g 79 -13.6 -3.53012 | gap 1 TCTGCCGCCGGGAAA CCG-GCGGGCCGGGC AAG GGCCGGACCGCGCGG GCTGCCGGGTGAGGC TERM 487 418567 - 418591 + G 76 -7 -4.4017 | GCGCAGTACCCCCTG GGCACCGACC ACCTG GGGCGCTGCC TTTTGTCGCGGTTGA Daud_0387 418303 - 419232 + | binding-protein-dependent transport systems inner membrane component TERM 488 419667 - 419705 + G 71 -13 -3.10533 | overlap 419665 419664 TGGCGGAGCTTCTTT TGCGCGTGGGCCTGCCCG ACC CGGAAAGGCTCATGCGCC TGTATCCTTTTCAGC Daud_0388 419252 - 420226 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 489 421050 - 421036 - g 85 -5.6 -5.00884 | overlap 421047 421049 ACCCGCGGCAAAAAA CCGGCC AAA AACCGG TGGTGCGGGGCGAGC TERM 490 421076 - 421047 - g 74 -4.8 -4.61527 | overlap 421036 421049 AAAACCGGCCAAAAA CCGGTGGTGCGG GGCGAG CCGCCCGACCCG GGAAGGCCTCCTGCA Daud_0389 420237 - 421202 + | oligopeptide/dipeptide ABC transporter, ATPase subunit Daud_0390 421237 - 421986 + | LmbE family protein TERM 491 423001 - 422991 - g 75 -3.2 -4.95155 | GGGAGAGCACAAAAA CCTG GTA CAAG GATTTGGCTATGACC TERM 492 423109 - 423119 + G 71 -4.6 -4.4078 | CGGCTTGAGCTTACG CTGG TTT CCGG TTTTCCTTCGGCCAG Daud_0391 422029 - 423597 + | extracellular solute-binding protein TERM 493 423885 - 423852 - f 95 -15.1 -3.29829 | overlap 423853 CATACGCTGGGATAA GCGCGGCTTCGGCGG TACT CCGCCGGGGCCGCGG CCTGCTACGTACAGG TERM 494 423884 - 423853 - f 100 -18.6 -2.57683 | overlap 423852 ATACGCTGGGATAAG CGCGGCTTCGGCGG TACT CCGCCGGGGCCGCG GCCTGCTACGTACAG TERM 495 424279 - 424249 - f 77 -11 -3.48276 | overlap 424276 CCCGTCTGCACACAA CGCCCGTCTGCGCG CCT CGCGCAAGCAGGTG CGGGATCGCACAGGC Daud_0392 424319 - 424876 + | hypothetical protein TERM 496 426624 - 426634 + F 74 -6.8 -4.35885 | AAAAATCACAGGATC TCGC GGG GCGA TTTGTTATCCTCCGT TERM 497 429420 - 429403 - g 84 -4.1 -5.1356 | opp_overlap 429418 CTCTATGAAGAAAAA GCCCT GATTTTAA AGGGC GATTTTGCCGTTGTC TERM 498 430904 - 430925 + G 73 -8.7 -4.08689 | overlap 430905 GTGCCCACCAGGTGG TTTACGCGG GTGG CCGCGTAGG TTTAGTTGTTCCCTC Daud_0394 428080 - 432825 + | hypothetical protein TERM 499 432922 - 432933 + G 71 -5.8 -4.35926 | TATGTTTGACCCTTA TCGG TATT CCGA TTTTGCGTTTCGGCT TERM 500 434431 - 434443 + G 80 -4.7 -4.88405 | opp_overlap 434428 434431, overlap 434438 TGATGCAAAAATGCA GCGAC TTG GCCGC TTTTATTTCGGCCTT Daud_0395 432818 - 434698 + | hypothetical protein TERM 501 434984 - 435006 + F 76 -9 -4.05446 | opp_overlap 434975 434974, overlap 434985 434995 AGGAAGTGGCCTTTG AGGCCGGTCG GGC CGGTCGGCCG TTTGTGGTTACCACC TERM 502 434985 - 435005 + F 81 -12.5 -3.02946 | opp_overlap 434975 434974, overlap 434984 434995 GGAAGTGGCCTTTGA GGCCGGTCG GGC CGGTCGGCC GTTTGTGGTTACCAC TERM 503 435985 - 435961 - f 75 -12.1 -2.93723 | overlap 435956 CTGGTAGGAAGCATA GGCGAAGAGGA ACA CCCTCCCCGCC TCCGTCTAAAATTGC TERM 504 438318 - 438298 - f 90 -8.1 -4.82667 | overlap 438300 CCATGATATGAAAAA GGCCGCGGC AAG GCAGCGGGC CTTCAAGGAGATTAC TERM 505 439934 - 439962 + F 71 -4.6 -4.67904 | opp_overlap 439935, overlap 439936 439937 CAAAGAGTGGAAGAG AGTCGATAAAGC AGATG GCTTTATCGGTG TTTTTGAAATTCATG TERM 506 439936 - 439960 + F 76 -9.4 -3.94933 | opp_overlap 439935, overlap 439934 439937 AAGAGTGGAAGAGAG TCGATAAAGC AGATG GCTTTATCGG TGTTTTTGAAATTCA Daud_0398 440453 - 441466 + | hypothetical protein TERM 507 441779 - 441756 - f 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 508 442675 - 442685 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC TERM 509 442726 - 442715 - g 72 -4.4 -4.62441 | CCCGAGACAAACAAA CATC GCGA GATG GCCTTCGGGGGATTT Daud_0399 441776 - 443107 + | transposase, IS4 family protein TERM 510 443696 - 443665 - f 95 -10 -4.72497 | overlap 443666 GACCGAGGAAGAAAA GCGGCAGATCACCG GTAA CGGTGAACAGCCGG GGCTCGTGCGCATGT TERM 511 443695 - 443666 - f 88 -13.5 -3.42775 | overlap 443665 ACCGAGGAAGAAAAG CGGCAGATCACCG GTAA CGGTGAACAGCCG GGGCTCGTGCGCATG TERM 512 443899 - 443881 - f 83 -13.1 -3.29947 | opp_overlap 443880 CATTGACGAGATCAA CCGGGGG GACAT CCCCCGG ATCTTCGGCGAGTTG TERM 513 444373 - 444389 + F 70 -6.5 -4.14243 | opp_overlap 444373 GGATGTTGCCAATCA GCGCATC CGG GATGAGC TTTTCGAGTCGGATC TERM 514 445275 - 445298 + G 74 -12.4 -3.53012 | opp_overlap 445274 TCGGCTGACCAAGAT CCTGTACCGG GACG CCGGTGCGGG TTTGGGCCGGGAGGC Daud_0401 444535 - 445842 + | McrBC 5-methylcytosine restriction system component-like protein Daud_0402 446385 - 446023 - | transcriptional modulator of MazE/toxin, MazF Daud_0403 446767 - 446411 - | DNA binding domain-containing protein TERM 515 448518 - 448498 - H 71 -4.6 -4.63218 | opp_overlap 448498 448499, overlap 448499 TGGGTTTCAAGAAAA CGTCTCCC TTCAT GGGTGACA TTTTCTCAGACCGCT Daud_0406 448865 - 449296 + | PilT domain-containing protein TERM 516 449330 - 449342 + F 74 -10.5 -3.51934 | overlap 449328 TTCGGCGCCAAGGCG CCGGG TAC CCCGG TATTTGTGCCGGGCG Daud_0407 449648 - 449893 + | AbrB family transcriptional regulator TERM 517 450148 - 450172 + G 71 -8.5 -3.83502 | opp_overlap 450141 450142 450144 AGGGTAAAGGACGCA GCCCGCATC AAAGCGG GAGGCGGGC TTTCGTATGCCGATG Daud_0408 449890 - 450300 + | PilT domain-containing protein TERM 518 450568 - 450595 + F 95 -10.6 -4.58395 | gap 1, opp_overlap 450571, overlap 450572 TGAAGTGTCTGCAAG CGAT-GGCGCCCT GGA AGGGCGCCTGTTG TTTTTGGGGCGTCGA TERM 519 450591 - 450571 - f 75 -12.5 -2.52543 | opp_overlap 450568 450572 AGTGTCTGCAAGCGA TGGCGCCCT GGA AGGGCGCCT GTTGTTTTTGGGGCG TERM 520 450572 - 450590 + F 100 -16 -3.80746 | opp_overlap 450571, overlap 450568 GTGTCTGCAAGCGAT GGCGCCCT GGA AGGGCGCC TGTTGTTTTTGGGGC TERM 521 450667 - 450711 + F 74 -8.4 -3.97026 | gap 1, opp_overlap 450659 450658 450666 450667 450691, overlap 450681 AAGGAAGCCAGAAAG CCCGGGCACCGGTGCCCCGCA AGAC TGCCGTGCGCAG-TCCCCGGG GTTTTTTGTTTCCCG TERM 522 450681 - 450712 + F 100 -6.5 -5.63517 | gap 1, opp_overlap 450667 450691, overlap 450667 GCCCGGGCACCGGTG CCCCGCAAGACTGC CGTGC GCAGTCCC-CGGGG TTTTTTGTTTCCCGG TERM 523 450741 - 450789 + F 74 -4.7 -4.82901 | gap 3, opp_overlap 450748, overlap 450749 GGAGCGTCCGATGGG CAGTGAAGCCCCT-GA-GGCGACG TATA TGTGGCCGTCCGGGGGCTTT-CTG TTTTTCTAAACACGG TERM 524 451300 - 451275 - g 72 -3.9 -4.56597 | overlap 451277 451285 451286 CCTCTTTGCGAAAAA GGCGGAAGA AGCCGGGG CCTGCCGCC TCCGGTACTGCGATA Daud_0409 450820 - 451725 + | pyruvate carboxyltransferase Daud_0410 451786 - 452676 + | molybdenum ABC transporter, periplasmic molybdate-binding protein Daud_0411 452688 - 453371 + | molybdate ABC transporter, inner membrane subunit TERM 525 453446 - 453400 - g 78 -3.1 -5.00884 | opp_overlap 453401, overlap 453401 AGTTTCGGCAAAAAA CTCTGGCACTTCGACC-TCAG AGTCAGA CTGAAGGTCGACA-GCCAGAT TGTGGTGCTCCAGGG Daud_0412 453373 - 454032 + | ABC transporter related TERM 526 454041 - 454017 - T 71 -4.8 -4.57353 | overlap 454018 GCGGACGAGACAAAA CGCTGCCGCC GGTTG AGCGCCGGCG ACCTGCCCCGGCGGG Daud_0413 455624 - 454167 - | hydrogenase large subunit TERM 527 454984 - 454998 + g 76 -5.6 -4.59773 | opp_overlap 454983, overlap 454979 GACGGAGCTACAATG GCCACC ATG GGTTGC TTTTTAACCCTCAGA TERM 528 455432 - 455449 + g 83 -7.7 -4.57482 | gap 1 TTATAATGCGAATCT GGGCC-TC TGC GACGGCCC TTTCTTTATAAATGC TERM 529 455915 - 455927 + H 74 -10.5 -3.51934 | overlap 455913 CGTTTTTGGCGCGCG CCGGG TAC CCCGG TATTTGTGCCGGGCG Daud_0414 456176 - 456445 + | CopG/DNA-binding domain-containing protein Daud_0415 456442 - 456867 + | PilT domain-containing protein Daud_0416 457557 - 457006 - | isochorismatase hydrolase TERM 530 457961 - 457980 + G 72 -4.3 -4.60889 | gap 1, overlap 457963 TGCCACTTTTGAGGA GC-TCAGG CTGAA CCTGATGC TTTTTGCCGATGCTT TERM 531 458196 - 458231 + G 76 -5.9 -4.58395 | opp_overlap 458198, overlap 458198 CTGACCAATGAAAGG CAGGGCCCGGTCCGG GGGTCG CTGGTCTGGGGCCGG TTTTTGGACGATCAG TERM 532 459077 - 459114 + G 74 -5.4 -4.59773 | overlap 459059 459079 TCCTTCCGTCTACGA GGGGCGGGGCGCTTTC GTCTGG GAGAAGGCCTCGCCGC TTTTTGACAGTCAGG TERM 533 459659 - 459647 - g 79 -9.1 -4.11692 | CATGTACCGGGAAAA GCTGC ACC GCAGC CAGAGTTCGCGCAGC TERM 534 460158 - 460191 + G 73 -12.6 -3.14051 | gap 2, overlap 460156 GAGCTGGAACGGTGT GCCGGCACGCAGTTCG ACCC CGAACTG-GTGC-GGC TGTTCGTGGAAATCC Daud_0417 457674 - 460235 + | diguanylate cyclase with PAS/PAC sensor TERM 535 460490 - 460503 + G 72 -4.5 -4.57341 | gap 1, overlap 460491 TGGAAAACAGTGAAG CGG-GC CTG GCTCCG TTTTTACGCCGAGTT Daud_0418 460484 - 461272 + | hypothetical protein Daud_0419 461401 - 461544 + | hypothetical protein Daud_0420 461551 - 462291 + | hypothetical protein Daud_0421 463289 - 462339 - | hypothetical protein Daud_0422 463701 - 463417 - | hypothetical protein TERM 536 463652 - 463679 + g 71 -14 -2.57132 | overlap 463651 TTGATCCGCCGTTCC CAGCGCCCGGCC CGGC GGCCGGGCGCAC CTTGTCCGGCGCGCG Daud_0423 464836 - 463823 - | hypothetical protein Daud_0424 465165 - 465362 + | hypothetical protein TERM 537 465461 - 465424 - f 100 -17.1 -3.65351 | opp_overlap 465438 465439 GTACCCGCACTGAAA GGGGACAGTCCCCTT CGGGCCTT AGGGGGACTGTCCCC CCAGGGTACCCGCTT Daud_0425 465589 - 465975 + | hypothetical protein TERM 538 466418 - 466435 + F 95 -12.7 -4.08394 | GTCTGCCGCCGGAAG TGGCCGC CGAA GCGGCCA TTTTAGCCCGGATCT TERM 539 467209 - 467186 - f 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 540 468105 - 468115 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC TERM 541 468156 - 468145 - g 72 -4.4 -4.62441 | CCCGAGACAAACAAA CATC GCGA GATG GCCTTCGGGGGATTT Daud_0428 467206 - 468537 + | transposase, IS4 family protein Daud_0429 470479 - 468755 - | hypothetical protein TERM 542 470392 - 470416 + g 74 -9.3 -3.83026 | overlap 470382 TTTCCGGTCCTTCAG GCCGGACCT TCACTCC AGGTTCGGC TTTGGTATGAAACAA TERM 543 470529 - 470505 - H 75 -6.4 -4.61482 | overlap 470508 CCCTCCAAAAAACAA GAAGACTACC GCCAA GGTAGTCCAC AATCCCAGTGGCGGC TERM 544 470526 - 470508 - H 85 -8.9 -4.40692 | overlap 470505 TCCAAAAAACAAGAA GACTACC GCCAA GGTAGTC CACAATCCCAGTGGC TERM 545 470595 - 470610 + H 76 -10.4 -3.74347 | CCGTAGCTTTGCGTC CCTGGC TTTC GCCAGG TTTGCCCTTTCTAGG Daud_0430 470823 - 471119 + | hypothetical protein Daud_0431 471669 - 471214 - | RDD domain-containing protein Daud_0432 473285 - 471954 - | transposase, IS4 family protein TERM 546 472335 - 472346 + g 72 -4.4 -4.62441 | AAATCCCCCGAAGGC CATC TCGC GATG TTTGTTTGTCTCGGG TERM 547 472386 - 472376 - G 76 -6.8 -4.48713 | GGCAGCAACAATAAA CCGT TCC ACGG TAATCGTAAACGATG TERM 548 473282 - 473305 + g 75 -3.8 -4.68456 | GTTGTGGTATAATGG CCATAAGGGA AACC TCCTTCGTGG TTCTTTTTTGGTGGT Daud_0433 474037 - 473552 - | hypothetical protein TERM 549 473684 - 473707 + g 72 -3.8 -4.58283 | GGAATCGTGCACCAA CTCCTCGTTA CCGG TGGCGAGCAG TTTTTCACGCAGTTC Daud_0434 475092 - 474292 - | ErfK/YbiS/YcfS/YnhG family protein TERM 550 475169 - 475157 - H 85 -4.7 -5.28755 | overlap 475158 475159 AAAGAGAGGAAAAAA CGCGC AAT GTGCG AAGATAGACAAAAGA Daud_0435 475246 - 476112 + | MscS mechanosensitive ion channel TERM 551 477398 - 477428 + G 77 -14.6 -2.83403 | overlap 477398 CCGATCCGGCCCTGG TTCGCCTCGAGGCG GGC CGCCACGGGGCGAC ATTTGCTACCCCGCA TERM 552 477398 - 477429 + G 81 -13 -3.72576 | gap 1, overlap 477398 CCGATCCGGCCCTGG T-TCGCCTCGAGGCG GGC CGCCACGGGGCGACA TTTGCTACCCCGCAA Daud_0436 476242 - 477657 + | copper amine oxidase domain-containing protein Daud_0437 477905 - 477651 - | hypothetical protein TERM 553 477863 - 477877 + g 91 -4.9 -5.32699 | GATAACCATCGTCAG CCGGT CCTAT GCCGG TTTTTTCCTGTTTCC TERM 554 478323 - 478280 - g 100 -17.5 -3.55444 | gap 1, overlap 478281 CGCTGACCCGCTAAA GCGGGTACCCCCGGGTACCC CGGGC GGGTACCCCCGGGTACCC-C GGATGCCCGACCGGG TERM 555 478323 - 478281 - g 86 -17.7 -2.73124 | overlap 478280 GCTGACCCGCTAAAG CGGGTACCCCCGGGTACCC CGGGC GGGTACCCCCGGGTACCCC GGATGCCCGACCGGG TERM 556 478680 - 478663 - g 81 -12.7 -3.72141 | ACATCTACATGGAAA CCAGGGC GGAA GCCCTGG AGTTCGGCCGGCGCT Daud_0438 477984 - 478733 + | 3D domain-containing protein Daud_0439 479718 - 478741 - | hypothetical protein TERM 557 479123 - 479087 - G 83 -7.1 -4.81814 | overlap 479088 ACGAGCACAAGAAAA CCGGCTCCGCCGAAGAG GTG CTGGTAGGCGGAACTGG CGATGACGCTCATGC Daud_0440 480782 - 480012 - | hypothetical protein TERM 558 480800 - 480824 + r 74 -11.5 -3.19778 | opp_overlap 480806, overlap 480806 CAACTCTCCTCTCCC AAAAAAGGGGC CAG GCCCCTTTTTA CTTTTCCTGACTTTT TERM 559 480806 - 480818 + r 100 -10.5 -5.1166 | opp_overlap 480806, overlap 480800 TCCTCTCCCAAAAAA GGGGC CAG GCCCC TTTTTACTTTTCCTG TERM 560 480818 - 480806 - R 100 -10.5 -5.00616 | opp_overlap 480806 480800 TCCTCTCCCAAAAAA GGGGC CAG GCCCC TTTTTACTTTTCCTG Daud_0441 481523 - 480822 - | GntR family transcriptional regulator Daud_0442 481675 - 482451 + | putative RNA methylase Daud_0443 483046 - 482420 - | methyltransferase type 12 TERM 561 483017 - 483037 + g 83 -5.3 -5.00616 | opp_overlap 483005 483004 AATCCGGTCGTAGAA GTCGACCGG GGT CTGGATGAC TTTTTTCACGGGCGC Daud_0444 483275 - 483685 + | hypothetical protein Daud_0445 483672 - 484709 + | N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase-like exopolysaccharide biosynthesis protein Daud_0446 484824 - 485417 + | hypothetical protein Daud_0447 485539 - 486003 + | hypothetical protein TERM 562 485994 - 486017 + F 89 -13.2 -3.56727 | TGCCGGTGGGGATCG CGGGGCATAG TCCG TTATGCCCCG TTGTCCTTGATTGGG TERM 563 486061 - 486049 - g 76 -5.5 -4.57569 | GTACCGTGTGAAAAA CGACT TTG AGCCG GACAGCATCTTCGAG TERM 564 487283 - 487273 - g 73 -8.2 -4.03234 | overlap 487274 TCCGGTGGAGATAAA CGGG GAT CCCG CAGGCTTGACACAGG Daud_0448 486041 - 487600 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 565 487799 - 487844 + F 91 -2.4 -5.75342 | overlap 487801 487828 AACTCTTTGGTATAG TTCCCGGCAAAGACAGGC ATGAGGGGGC GCCGGGTATTGCCGGGTA TTTTTTTTAAGGAGG TERM 566 487801 - 487842 + F 73 -5 -4.52949 | overlap 487799 487828 CTCTTTGGTATAGTT CCCGGCAAAGACAGGC ATGAGGGGGC GCCGGGTATTGCCGGG TATTTTTTTTAAGGA Daud_0449 487869 - 488405 + | hypothetical protein TERM 567 488482 - 488509 + T 100 -10.6 -5.67063 | gap 1 ACCGGACAGGGTGGA GAGGTGGGACTCT TTA AG-GACCCACCTC TTTTTTTGTCATGGG Daud_0450 489389 - 488550 - | hypothetical protein Daud_0451 490328 - 489543 - | hypothetical protein TERM 568 490553 - 490522 - R 100 -15.9 -3.21622 | AGAGATAGTTAGGAA GGGGTCAGGCTCC TGGCTG GGAGGCTGACCCC TGAGACGAAAGTCAA TERM 569 490579 - 490591 + r 86 -7.7 -4.82901 | opp_overlap 490579 490572 490573 GTCAAAAGGTAAAAA GGTGT CTG ACACC TTTTTCTAGGCCGGG TERM 570 490591 - 490579 - R 91 -7.7 -4.87318 | opp_overlap 490579, overlap 490572 490573 GTCAAAAGGTAAAAA GGTGT CTG ACACC TTTTTCTAGGCCGGG Daud_0452 493185 - 490597 - | ATPase TERM 571 490649 - 490679 + g 75 -14.7 -2.73875 | overlap 490639 490646 490667 490668 AGGGTCACCCGGACT TCCTGGCCGGGGG TGATT TCCCCGGCGAGGA TGCTCTTGGCCAGGG TERM 572 491209 - 491154 - G 75 -14.6 -2.73875 | gap 1, opp_overlap 491165 491168, overlap 491151 TCTCGTCGAAGAGCA GCACGGCGTAAGGCCGGCGGCGCACCG TTT CGGTGAGCTGCCCGCCTT-CCTCGTAC CCCACGTACCCCGGG TERM 573 491165 - 491199 + g 93 -19.2 -3.21099 | opp_overlap 491151 491154, overlap 491168 AGCAGCACGGCGTAA GGCCGGCGGCGCACCG TTT CGGTGAGCTGCCCGCC TTCCTCGTACCCCAC TERM 574 492462 - 492475 + g 72 -4.5 -4.64657 | overlap 492439 CGCCGATATCGAAGG CGAGC AGGC GCTTG TTTTTCAGAGTTTCG Daud_0453 494182 - 493223 - | chaperone DnaJ domain-containing protein TERM 575 494263 - 494240 - R 90 -10.2 -4.32201 | overlap 494244 CTAATTAAGGGAAAA GCGAGGGGGC AGAG ACCTCCTCGC CACCAAAAAACAAAG TERM 576 494307 - 494278 - R 77 -3.5 -5.0917 | gap 1 CCACCAAAAAACAAA GTCGGGGGAGAGTG AGC CAC-CTCAACCAAC GCTATTCTGCAAGAA Daud_0454 494743 - 494309 - | heat shock protein Hsp20 Daud_0455 495093 - 494743 - | MerR family transcriptional regulator TERM 577 495287 - 495259 - H 100 -8.8 -5.24129 | TCTTTTGACAAAAAA CGGCCCAGGAAA GCGTT TCCCCCGGACCG AAAGGAGATGAGCAT TERM 578 495820 - 495839 + G 82 -11.4 -4.07687 | overlap 495802 CGCGCCGTACTGCGA GCGGCACG GCGG CGTGCTGC TTTTCAACCCCGGAT Daud_0456 495410 - 495955 + | phosphodiesterase Daud_0457 495959 - 496240 + | hypothetical protein TERM 579 496322 - 496346 + F 100 -10.8 -5.40072 | gap 1 AAAAGCAACTCTTAG CACGGA-CCTG AACC CAGGGTCCGTG TTTTTTTCGGCCGGC TERM 580 496737 - 496721 - g 83 -5 -4.9725 | overlap 496722 ATTTTGACATAAAAA TGCCGG AGAAG CCGGCC AAAGATGCGAAGACT Daud_0458 496468 - 497466 + | hypothetical protein Daud_0459 498443 - 497478 - | NAD-dependent epimerase/dehydratase TERM 581 498861 - 498880 + G 81 -2.7 -5.18726 | CACTTATACCGCCAG GCTCGGC ACTAAG GCGGGGC TTTTTATTGTGAGGC Daud_0460 498640 - 499410 + | hypothetical protein Daud_0461 499877 - 499419 - | hypothetical protein TERM 582 499979 - 499960 - R 75 -11.4 -3.35679 | gap 1 CCTCGTGATTCACAA CGCGGGTCC GGT GG-CCCGCG AGAACGACGCGCTGC TERM 583 500170 - 500142 - R 100 -20.5 -4.29929 | opp_overlap 500142 500150, overlap 500150 ATGAAAGTCAAGAAA GGTAAAAAGGGGC CAG GCCCCTTTTTACC TTTTTCAGTTCAGGA TERM 584 500142 - 500170 + r 100 -20.5 -4.74103 | opp_overlap 500142 500150, overlap 500150 ATGAAAGTCAAGAAA GGTAAAAAGGGGC CAG GCCCCTTTTTACC TTTTTCAGTTCAGGA TERM 585 500162 - 500150 - R 100 -10.5 -4.86939 | opp_overlap 500142 500150, overlap 500142 CAAGAAAGGTAAAAA GGGGC CAG GCCCC TTTTTACCTTTTTCA TERM 586 500150 - 500162 + r 100 -10.5 -4.92239 | opp_overlap 500150 500142, overlap 500142 CAAGAAAGGTAAAAA GGGGC CAG GCCCC TTTTTACCTTTTTCA Daud_0462 500471 - 500175 - | hypothetical protein TERM 587 500601 - 500575 - R 95 -15 -3.57462 | GACGGCAGCCGGAAA GCCGGCGCCGGG GTG CCCGGCGTGGGC CAGTCCAGGGGCGGC Daud_0463 501649 - 500765 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_0464 502369 - 502055 - | hypothetical protein TERM 588 502088 - 502111 + g 71 -6 -4.33151 | gap 1, opp_overlap 502080 GAACAATGCCTGTTC TTCG-GGCCGG TAA TCGGCCGTGAA TTTTCCCTTATAATC TERM 589 503391 - 503405 + G 76 -9.2 -4.07568 | CGGCCGACGACGAGG GGCTGG CCA CCGGCC TTTTGCGGGGCACCG Daud_0465 502607 - 503485 + | ribosomal L11 methyltransferase TERM 590 503563 - 503542 - T 100 -14.4 -4.54727 | opp_overlap 503560 CGCCTGAAATGAAAA GGCCCGCC GTTGAA GGCGGGCC GGCCGGTCTATTCCG Daud_0466 503942 - 503571 - | hypothetical protein TERM 591 504167 - 504147 - g 80 -5.4 -4.86293 | gap 2, opp_overlap 504157 504163 504165 CAAGAAAAAGGAAAA GGGGC--CGG AAG CCGAAGCCCC GGTGGCACCGGGTGG Daud_0467 504112 - 504906 + | hypothetical protein TERM 592 505048 - 505075 + GF 73 -3.5 -4.72272 | gap 3, overlap 505047 505051 GGTGCTCCTGCTGGT CAG-A-C-CCGGCC TGT GGCCGGTGGTGCTG TTTTTGGTGCCGGCC TERM 593 505461 - 505476 + GF 72 -11.8 -2.82635 | opp_overlap 505426 505424 505423 TCCGGGACTGCGAGT GCCCCC TGGC GGGGGC TGTCATCGTGCCCCT Daud_0468 504956 - 506308 + | signal transduction histidine kinase, LytS Daud_0469 506283 - 507047 + | response regulator receiver protein TERM 594 507196 - 507229 + G 89 -16.7 -3.53012 | gap 1 GGGATTGCTGCCGGG CGCGCCGCGCGGC-CT ACG AGTGCTACGCGGCGCG TTTCGCGGCCAAGGA Daud_0470 507075 - 507470 + | holo-acyl-carrier-protein synthase TERM 595 507531 - 507544 + F 86 -3.8 -5.40072 | opp_overlap 507531 CACAGAAGGTCATAA GGAG ACTGTC CTCC TTTTTTTCGGAAAGG TERM 596 509039 - 509054 + G 70 -11.8 -3.14132 | GGAACCCGGTCCAGC GGCGGC CGCC GCCGCC TTCCTGCACGGGCGG Daud_0471 507570 - 509168 + | carbohydrate kinase, YjeF related protein TERM 597 509160 - 509185 + F 83 -7.5 -4.62336 | opp_overlap 509173 GCTTTCCACGAACTC GGCGCCTGAAA AAGG TGTCAGGCACC TTTTTGGGGTGGGAT TERM 598 509185 - 509173 - f 71 -4.8 -4.56597 | opp_overlap 509160 TCGGCGCCTGAAAAA GGTG TCAGG CACC TTTTTGGGGTGGGAT Daud_0472 509199 - 510341 + | alanine racemase Daud_0473 510974 - 510621 - | nitrogen regulatory protein P-II TERM 599 510705 - 510717 + g 81 -10.5 -4.11216 | opp_overlap 510700 510704 CAGGACAAAACCGAT GCCGG TGC CCGGC TTTTCCAGCTGGCCG TERM 600 510804 - 510831 + g 72 -2.7 -4.71426 | overlap 510805 510813 GATGATCTCTTTTTC G-GGCTCGATCGG TATG CCGAGC-AGCCGC TTTTGTTCATGCACG Daud_0474 511698 - 510961 - | hypothetical protein Daud_0475 512387 - 511695 - | hypothetical protein TERM 601 513977 - 513923 - g 78 -6.9 -4.56597 | gap 1, overlap 513924 513925 CCTCCTCTCCAAAAA GGTGCCGTGCGCAACGGCATCCGCTG AACC CAGCGG-CCCCGTTGCGCCCTCGGCC TTCACCGGATCAGGG Daud_0476 512676 - 514100 + | major facilitator transporter TERM 602 514201 - 514215 + F 79 -2.8 -5.15167 | AAGGCATGCGTCAGT CCTG AGGTTTA CAGG TTTTTCTTCCTCATC TERM 603 515444 - 515457 + G 77 -3.7 -4.87665 | TGGCCGGTACCGAGC GGGCG GCGG CGACC TTTTTCTCGGTCAAC Daud_0477 514288 - 515709 + | hypothetical protein Daud_0478 515715 - 517187 + | metal dependent phosphohydrolase TERM 604 517331 - 517295 - T 76 -9.5 -3.83026 | gap 1, opp_overlap 517296 517297, overlap 517296 TGGTGGCAGACTAAA CGGGGGCGTGACCC AAAGCAAAAG GGATCACGCCCC-G TTCTGTTGTCTGGTG TERM 605 517296 - 517331 + T 71 -8.3 -3.80945 | gap 1, opp_overlap 517295 517296, overlap 517297 GGTGGCAGACTAAAC GGGGGCGTGA-CCC AAAGCAAAA GGGATCACGCCCCG TTCTGTTGTCTGGTG TERM 606 517297 - 517330 + T 75 -11.8 -2.87844 | gap 1, opp_overlap 517295 517296, overlap 517296 GTGGCAGACTAAACG GGGGCGTGA-CCC AAAGCAAAA GGGATCACGCCCC GTTCTGTTGTCTGGT Daud_0479 518376 - 517555 - | hydroxyethylthiazole kinase TERM 607 517704 - 517646 - G 78 -10.3 -4.07687 | gap 3, overlap 517633 517632 AGGGCGGTCCGAAAA CTGGCCGGTCCACGGGCCTCCCGGGCGG CCAGTT CCGCC-GCCAGGCC-GTAGGC-GGCCAG CGCACCGGCGGCGGC TERM 608 518523 - 518511 - H 80 -4.7 -5.03314 | CCGACCGGCAAAAAA CGGCG GGA CGCAG CGTTCTTCACAGTCC Daud_0480 518736 - 519593 + | NLP/P60 protein TERM 609 519958 - 519980 + F 71 -6.1 -4.30978 | overlap 519947 519967 TCTTCCGGGCGTTCC CGCGCCGCG CCGAA CGCTGGGCG TTTTGGTCCGTTGAC TERM 610 520968 - 520987 + G 82 -3.4 -5.14965 | TATGAAGACACGCTG GCCGGGGT GGTG GCACTGGC TTTTTTCATGCCGGT Daud_0481 520047 - 521399 + | magnesium transporter Daud_0482 522019 - 521396 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 611 521733 - 521754 + g 71 -5.7 -4.30576 | AGGTTTTCGGCGTAG CCGTGGGCG ATGG CGGCCAGGG TTTTCATGCTGCACG TERM 612 522444 - 522485 + G 72 -4.2 -4.56597 | CTCTTGCTCCAGGTG CTGCGGCGGCTGGCGG AAGACAAAAG CGGCCTGCCGGTGCGG TTTTTCGAGGCCCGG Daud_0483 522087 - 522836 + | DNA repair protein RecO TERM 613 522947 - 522922 - f 72 -11.3 -3.03899 | gap 1, opp_overlap 522929, overlap 522929 TAAAAGTCAAAGAAG GTAAAAAGGGGC CTG GCCCCTTTTT-C GGAAACCCCTTTTTC TERM 614 522941 - 522929 - f 100 -10.5 -4.8384 | opp_overlap 522929, overlap 522922 CAAAGAAGGTAAAAA GGGGC CTG GCCCC TTTTTCGGAAACCCC TERM 615 522929 - 522941 + F 95 -10.5 -4.56597 | opp_overlap 522929 522922 CAAAGAAGGTAAAAA GGGGC CTG GCCCC TTTTTCGGAAACCCC Daud_0484 522979 - 523866 + | glycine--tRNA ligase TERM 616 523952 - 523942 - g 73 -8.2 -4.09739 | GGAACTGGCCGAAAA GGGC CGC GCCC TGCTGGCGGAATACC TERM 617 524931 - 524903 - g 84 -3.8 -5.15969 | gap 1, overlap 524904 524919 CCGGAACTGAAAAAA GTGGTGTTCCAGG AGAG CCTGGG-CACCAT GCACGAGAAAGTGGA TERM 618 525022 - 525000 - g 71 -9.1 -3.72576 | gap 1, opp_overlap 525021 TTGGGCTGGACGAAA CCGAGCGCGC CCAG GCGCAC-CGG GCGGCAGTCCTTTCC TERM 619 525463 - 525485 + G 72 -7.6 -4.16016 | overlap 525444 525456 CGGGCAGCGCCTGCG GGTCCTGTTC CAG GACCGGGGCC TTTCTTACGGGGTGG TERM 620 525761 - 525805 + G 76 -10 -3.9122 | gap 3 CGACGCCGGTACGGT GCGG-CC-CTGGC-CGCGCTG GCGGAA CTGCGCGAGCCGGTGGACCGC TTCTTTGACGGAGTC Daud_0485 523856 - 525922 + | glycine--tRNA ligase Daud_0486 526064 - 526705 + | signal-transduction protein TERM 621 527397 - 527413 + G 76 -9.3 -4.08216 | opp_overlap 527369 GGCGGACGCCGGCTA CGCGCGC AGT GAGCGCG TTTTAAAAGAACTGG TERM 622 527505 - 527487 - g 74 -10.3 -3.7282 | overlap 527503 CGACGTCACCAACAA GGCTGTC GAGGA GACAGCC GGCAAGGTGCTGGAG Daud_0487 526747 - 527556 + | hypothetical protein Daud_0488 527560 - 528147 + | 2'-5' RNA ligase Daud_0489 528171 - 528791 + | NADPH-dependent FMN reductase TERM 623 528799 - 528821 + F 100 -17.7 -5.26316 | opp_overlap 528797 528796 AGGGTTGAGAAAGCT CCCCGGGCC CCGGT GGCCCGGGG TTTTTTATCAGGTGA TERM 624 529204 - 529160 - g 82 -14.9 -3.35813 | opp_overlap 529159, overlap 529163 CTCCAGTTGAATGAA GACCTGACCGAGGCCGTGGCC CTG GGCCACGATCTCGGGCACACC CCTTTCGGGCATACC TERM 625 529201 - 529163 - g 77 -15.2 -2.54574 | opp_overlap 529159, overlap 529160 CAGTTGAATGAAGAC CTGACCGAGGCCGTGGCC CTG GGCCACGATCTCGGGCAC ACCCCTTTCGGGCAT Daud_0490 528860 - 529882 + | putative deoxyguanosinetriphosphate triphosphohydrolase Daud_0491 529911 - 531710 + | DNA primase Daud_0492 531727 - 532809 + | RpoD family RNA polymerase sigma factor TERM 626 533357 - 533392 + F 100 -8.2 -5.72622 | opp_overlap 533377 CCACCAGTAACGACT CCGCGAAGCCTTAGAG CACA CGCAAGGGTTTTGCGG TTTTTTGTTTGTGGG TERM 627 533884 - 533898 + G 71 -12.8 -3.06796 | overlap 533891 AGCTTACCGGCACCA CCGCCC ACC GGGCGG TTGACTCCCGTACCG Daud_0493 533493 - 533936 + | DNA-binding protein TERM 628 534013 - 533976 - T 70 -6.9 -4.13767 | opp_overlap 533979, overlap 533978 533979 CTGCTCACCCCAAAA GAGCGGCAAGGAATTCC TCCG GGAAGACCTTGCCGTTA GTGCTCTCAAGTCCG TERM 629 534011 - 533978 - T 74 -9.5 -3.6692 | opp_overlap 533979, overlap 533976 533979 GCTCACCCCAAAAGA GCGGCAAGGAATTCC TCCG GGAAGACCTTGCCGT TAGTGCTCTCAAGTC TERM 630 533979 - 534010 + T 83 -13 -3.24925 | opp_overlap 533978 533976 533979 CTCACCCCAAAAGAG CGGCAAGGAATTCC TCCG GGAAGACCTTGCCG TTAGTGCTCTCAAGT TERM 631 534010 - 533979 - T 76 -13 -2.79831 | opp_overlap 533979, overlap 533978 533976 CTCACCCCAAAAGAG CGGCAAGGAATTCC TCCG GGAAGACCTTGCCG TTAGTGCTCTCAAGT Daud_0494 534565 - 534218 - | hypothetical protein Daud_0495 534929 - 534648 - | hypothetical protein TERM 632 534852 - 534873 + g 72 -12.3 -3.25823 | TTCTCCCGGCGCCTG GGGCAGCCA GGCC TGGCTGCTC TTGATCTCCAGAACC Daud_0496 535033 - 535728 + | hypothetical protein Daud_0497 535719 - 536507 + | hypothetical protein TERM 633 536990 - 537025 + F 100 -14.7 -4.65933 | opp_overlap 536999, overlap 536991 ACAGGTTTACTCGCC CGCGCCAAACCGCGG CATAAC CCGCGGTTTGGCCCC TTTATTTTGCGGCTC TERM 634 536991 - 537024 + F 100 -18.2 -3.38836 | opp_overlap 536999, overlap 536990 CAGGTTTACTCGCCC GCGCCAAACCGCGG CATAAC CCGCGGTTTGGCCC CTTTATTTTGCGGCT TERM 635 537016 - 536999 - f 71 -9.8 -3.53012 | opp_overlap 536991 536990 CTCGCCCGCGCCAAA CCGCGG CATAAC CCGCGG TTTGGCCCCTTTATT TERM 636 537134 - 537155 + F 90 -4.3 -5.36441 | overlap 537135 GCCGCCGCCCGGGGT ATTCCTGCC GGTA GGCCGGAAA TTTTTTGTATCCGGG TERM 637 537282 - 537330 + F 100 -15.5 -4.07568 | opp_overlap 537286, overlap 537283 GCTTTTCGACGAGAT C-GAAGGGCCGCAACAATGCAGG CTTGA CCTGT-TCGTTGCGGCCCTTCTG TTTTGCAGGCGACCG TERM 638 537283 - 537328 + F 100 -19.2 -3.63744 | gap 1, opp_overlap 537286, overlap 537282 CTTTTCGACGAGATC GAAGGGCCGCAACAATGCAGG CTTGA CCTGT-TCGTTGCGGCCCTTC TGTTTTGCAGGCGAC TERM 639 537325 - 537286 - f 93 -15.8 -3.14468 | gap 1, opp_overlap 537283 537282 TTCGACGAGATCGAA GGGCCGCAACAATGCAGGC TTG ACCTGT-TCGTTGCGGCCC TTCTGTTTTGCAGGC Daud_0498 537375 - 538547 + | phage integrase family protein TERM 640 538797 - 538767 - f 72 -11.8 -2.72144 | overlap 538766 CGACTGCTGGTAAAC GGCCGGGAAGCGCA GCT TATCCTTCCCGGCC CAGACGGCGGCTCTG TERM 641 539407 - 539393 - g 91 -2.8 -5.40072 | CCCCCGGCAAAAAAA CAGG GACAGGT CCTG GAATGACGAAGAGTT Daud_0499 539070 - 539927 + | phage integrase family protein Daud_0500 540157 - 539900 - | hypothetical protein Daud_0501 540261 - 540602 + | hypothetical protein Daud_0502 540568 - 540882 + | hypothetical protein TERM 642 542489 - 542444 - g 76 -9.8 -3.83771 | overlap 542468 AAGAAATGGAGGAAA GCGAACGCGAGCGGCT-CGAGC AAAT GCTCGAAGCCA-TCACCCTCGC GAGTAACGCCGAGCA TERM 643 542634 - 542650 + G 78 -6.5 -4.59853 | overlap 542634 TTTTTTCGACCAGCC GGCGAAG CGC CTTCTCC TTTTTACCGAGTTCA TERM 644 543257 - 543286 + G 70 -10.5 -3.61398 | opp_overlap 543258, overlap 543258 543279 TGGCAATGCTGATAG AGCGCCGCGCCCG TGCC CAGGAGCGGCGCG TTGTTCCCGAGACCA TERM 645 543285 - 543258 - g 83 -16.2 -2.89742 | opp_overlap 543257 543258 543279 GGCAATGCTGATAGA GCGCCGCGCCCG TGCC CAGGAGCGGCGC GTTGTTCCCGAGACC TERM 646 543258 - 543285 + G 72 -14 -2.76696 | opp_overlap 543258, overlap 543257 543279 GGCAATGCTGATAGA GCGCCGCGCCCG TGCC CAGGAGCGGCGC GTTGTTCCCGAGACC Daud_0503 541144 - 544587 + | helicase domain-containing protein Daud_0504 544580 - 544792 + | hypothetical protein Daud_0505 544801 - 546792 + | ATP-dependent endonuclease, OLD family protein Daud_0506 546773 - 549784 + | hypothetical protein Daud_0507 549794 - 550759 + | hypothetical protein TERM 647 552759 - 552769 + G 73 -8.2 -4.02022 | overlap 552729 552766 AAGATGAGGTTTGGG GCGG TTA CCGC TTTGTGGTGATTGCA Daud_0508 550775 - 553549 + | AAA family ATPase Daud_0509 554335 - 554592 + | hypothetical protein Daud_0510 554688 - 554999 + | hypothetical protein Daud_0511 555003 - 555248 + | hypothetical protein Daud_0512 555351 - 555626 + | hypothetical protein TERM 648 555710 - 555730 + G 84 -8.9 -4.43309 | TTGATCCGTGCTGTC CCAGTTGCG GTG CGCCGCTGG TTTTGCTTGACCTTC Daud_0513 555610 - 555873 + | hypothetical protein TERM 649 556034 - 556047 + F 73 -5.9 -4.4767 | TATGTGGGTGGAGTG GCTGC AACT GCGGC TTTTGTCCTGGCTGC TERM 650 556403 - 556373 - f 100 -17.5 -3.45634 | opp_overlap 556373, overlap 556374 AGGTGAAGCAACGAA CGGGGGCCGGGCC TGCGC GGCCCGGTCCCCA TGTTCACCCCTGCCA TERM 651 556373 - 556403 + F 100 -17.5 -3.03124 | opp_overlap 556373 556374 AGGTGAAGCAACGAA CGGGGGCCGGGCC TGCGC GGCCCGGTCCCCA TGTTCACCCCTGCCA TERM 652 556402 - 556374 - f 100 -18.8 -2.66899 | opp_overlap 556373, overlap 556373 GGTGAAGCAACGAAC GGGGGCCGGGCC TGCGC GGCCCGGTCCCC ATGTTCACCCCTGCC Daud_0514 556438 - 556800 + | hypothetical protein Daud_0515 556976 - 557203 + | hypothetical protein TERM 653 557313 - 557271 - T 100 -12.8 -4.7629 | gap 1, opp_overlap 557270 557271 GGAGGAATTTAAAAA GCTCACACCGCGGGAGCAG AAGGAG CTGCTCCGGCGGC-TAAGC GCTTTCGTCACCGTC Daud_0519 558957 - 558055 - | phage integrase family protein TERM 654 559071 - 559050 - H 73 -10.9 -3.37493 | opp_overlap 559053, overlap 559053 CCTTGAAGACAGCAA GAAGGCACC CTTG GGTACCTTC TCCGTGTGAACTCGG TERM 655 559107 - 559138 + H 100 -15.9 -5.08255 | opp_overlap 559114, overlap 559108 AGGTTTACTCGCCCG CGCCAAACCGCGG CATAAC CCGCGGTTTGGCC TTTTATTTTGCGGCT TERM 656 559108 - 559137 + H 100 -19.4 -3.63868 | opp_overlap 559114, overlap 559107 GGTTTACTCGCCCGC GCCAAACCGCGG CATAAC CCGCGGTTTGGC CTTTTATTTTGCGGC TERM 657 559131 - 559114 - H 71 -9.8 -3.53012 | opp_overlap 559108 559107 CTCGCCCGCGCCAAA CCGCGG CATAAC CCGCGG TTTGGCCTTTTATTT TERM 658 559377 - 559393 + H 100 -3.6 -5.76949 | opp_overlap 559378, overlap 559378 ATCCCGCCGCAGAAA ACCGCT GGAAA AGCGGG TTTTTTTTCAAGGTA TERM 659 559392 - 559378 - H 74 -7.1 -4.36914 | opp_overlap 559377 559378 TCCCGCCGCAGAAAA CCGCT GGAAA AGCGG GTTTTTTTTCAAGGT Daud_0520 559434 - 559658 + | hypothetical protein Daud_0521 560763 - 559879 - | aldo/keto reductase TERM 660 560463 - 560480 + g 73 -6.9 -4.25283 | opp_overlap 560448, overlap 560448 GTTGCATCGTCCCGT CGCGGGA TCGG TCCAGCG TTTTGCTGGCAAGAT TERM 661 560710 - 560727 + g 82 -3.3 -5.1166 | CTTGCGCCGGGGGAT GGGTGGC TCTT GCGACTC TTTTTCGTTTTCATC Daud_0522 561038 - 561712 + | hypothetical protein Daud_0524 561946 - 562494 + | phosphodiesterase TERM 662 562619 - 562582 - T 76 -3.4 -5.02476 | gap 3, opp_overlap 562582 562593, overlap 562583 ATATTGGCTAAAAAA GCCG--CCGCAGA-CGGGG GTG CCCGGGTTTGCGGTTCGGC TCCTTGGGAGGGGGG Daud_0525 563551 - 562922 - | HAD family hydrolase Daud_0526 563744 - 565114 + | copper amine oxidase domain-containing protein Daud_0527 565786 - 565139 - | hypothetical protein TERM 663 565346 - 565369 + g 78 -10.2 -3.99374 | opp_overlap 565346 GAGGCCGGCGATCAA TGCCTGCACC TTGT GGGGCGGGCA TTCTTCTTCGTGCGC Daud_0528 566044 - 566928 + | HtpX domain-containing protein TERM 664 567147 - 567170 + F 74 -6.6 -4.24342 | opp_overlap 567150, overlap 567148 567150 TGCCTGCCTGATTGA GAACACCCCC GCAA GGGGGTGTGG TTTCTTGATGCCAAG TERM 665 567167 - 567150 - f 84 -12.7 -3.35679 | opp_overlap 567150 567148 567147 CTGCCTGATTGAGAA CACCCCC GCAA GGGGGTG TGGTTTCTTGATGCC TERM 666 567150 - 567167 + F 81 -12.7 -3.12942 | opp_overlap 567150, overlap 567148 567147 CTGCCTGATTGAGAA CACCCCC GCAA GGGGGTG TGGTTTCTTGATGCC TERM 667 567207 - 567191 - g 100 -13.7 -5.08601 | TGATGCCAAGAAAAA CCCCGAG GTT CTCGGGG TTAACGATTCCGGGC Daud_0529 567165 - 567467 + | hypothetical protein Daud_0530 569697 - 567958 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 668 568473 - 568453 - G 74 -2.3 -4.87665 | overlap 568454 GGCCAGGGACAAAAA TCCGGTGAC GAT GGCGCCGGC CCGGTCGAGTTCGGC TERM 669 569029 - 569045 + g 74 -9.3 -3.90889 | overlap 569030 GAGCGCCTCTTCCGC CCGCCGC CGC GCGGCGA TTTCCCTTTGTAGTT TERM 670 569030 - 569044 + g 70 -12.8 -2.93449 | overlap 569029 AGCGCCTCTTCCGCC CGCCGC CGC GCGGCG ATTTCCCTTTGTAGT TERM 671 569692 - 569666 - G 100 -15.1 -4.48987 | CGTGTACAAGGAAAA GGGCCGGTCTC GAACT GGGACCGGCCC GGCAACGAAGGGGTT Daud_0531 569891 - 569712 - | hypothetical protein TERM 672 570327 - 570337 + H 74 -3.2 -4.87893 | TCTTGTGTGGGGAGA GGCA AGA TGTC TTTTTGGTTCGAGTT Daud_0533 570333 - 571013 + | ABC transporter related TERM 673 571326 - 571338 + G 80 -5.5 -4.72272 | GGCCTACCTGTCCCT GGTGT GCA GCACC TTTTTCGTGGGCACG Daud_0534 571021 - 571824 + | hypothetical protein TERM 674 572236 - 572208 - g 70 -7.4 -4.08064 | AACTGCGGTGGAAAA CCGTG-CAGGTGCG GGA CGC-CCTGACCCGG CTCGGGGGTCTGGGA TERM 675 573012 - 572998 - g 100 -4.2 -5.5074 | overlap 572999 CAACGGAATAAAAAA CGTCCG CTT CGAACA GGGGGCGGTGGAGGA Daud_0535 571907 - 573304 + | RNA methyltransferase Daud_0536 573588 - 573959 + | hypothetical protein TERM 676 574166 - 574181 + G 77 -2.6 -5.00616 | gap 1, opp_overlap 574166 CGGGGTGAAAAAGAT TATCGGC TGT GCC-ATA TTTTTTGGGGCAAAG Daud_0537 574077 - 574865 + | TatD-related deoxyribonuclease Daud_0538 575328 - 577910 + | diguanylate cyclase with PAS/PAC sensor TERM 677 578155 - 578138 - gf 91 -4.8 -5.28983 | TGGAAAAGATAAAAA CCCTGC AGGAGA GCAAGG TCAAAAATTTCGATC TERM 678 578363 - 578347 - g 93 -9.3 -4.77157 | CGAAGTCATCAAAAA GGGCGTG GAG CGCGCCC CGCACCGCAGCCTGC Daud_0539 577954 - 578400 + | hypothetical protein TERM 679 579883 - 579901 + GF 85 -13.1 -3.53224 | opp_overlap 579878 579895 GCCGCAGGAAGAGCT GGCCGCC AGAAA GGCGGCC TTTACGCCGCCGCTC TERM 680 579912 - 579895 - gf 76 -9.8 -3.85698 | opp_overlap 579883, overlap 579878 GCTGGCCGCCAGAAA GGCGGC CTTTAC GCCGCC GCTCAGGCAGGGACT Daud_0540 578324 - 580033 + | dihydroxy-acid dehydratase TERM 681 580612 - 580627 + G 76 -10.4 -3.86822 | TACGATGTGGGAGTT GCCGGT ATCC ACCGGC TTTATGGGCCCCTTA Daud_0541 580111 - 580911 + | hypothetical protein Daud_0542 581106 - 581324 + | glutaredoxin Daud_0543 581536 - 582072 + | rubrerythrin TERM 682 582074 - 582102 + F 84 -8.8 -4.37092 | gap 1 GTGAACAATATTAGT TCCCCCTCGGAGC GGCC GC-CCGGGGAGGA TTTTCTAAGCGGCGT TERM 683 582318 - 582330 + G 78 -10.5 -4.07568 | opp_overlap 582300 CACACGGCGGCGGGG CCCCC TGT GGGGG TTTTCAAGAACAACC Daud_0544 582177 - 582659 + | transcription activator, effector binding Daud_0545 584175 - 582799 - | TrkH family potassium uptake protein TERM 684 584326 - 584295 - R 100 -16 -4.88895 | opp_overlap 584299, overlap 584299 AAATAAATAAATAAA TAAACTTCGCAGCC AGCG GGCTGCGAAGTTTG CCTGGATTCCGGACT TERM 685 584299 - 584322 + r 100 -16.8 -3.68619 | opp_overlap 584295 584299 AAATAAATAAATAAA CTTCGCAGCC AGCG GGCTGCGAAG TTTGCCTGGATTCCG TERM 686 584322 - 584299 - R 100 -16.8 -4.88895 | opp_overlap 584299, overlap 584295 AAATAAATAAATAAA CTTCGCAGCC AGCG GGCTGCGAAG TTTGCCTGGATTCCG Daud_0546 584651 - 584340 - | coat F domain-containing protein Daud_0547 584910 - 584689 - | hypothetical protein TERM 687 585101 - 585075 - R 90 -5.8 -5.27335 | opp_overlap 585074 585075, overlap 585076 GGCTGGAAAGAAAAA TGCTGCCAGC AACTGGA ACTGGCAGCG GTTTGGGTCTGTTAC TERM 688 585100 - 585076 - R 70 -9.3 -3.75678 | opp_overlap 585075 585074, overlap 585075 GCTGGAAAGAAAAAT GCTGCCAGC AACTGGA ACTGGCAGC GGTTTGGGTCTGTTA Daud_0548 585262 - 585113 - | hypothetical protein TERM 689 585144 - 585197 + g 83 -15.9 -3.18383 | gap 1, overlap 585174 585194 AAGGGCACCCGGTAT CCGGTCAGGTCTTCGGCGACGTAGCC GGG GGCGATGTCGGCGCCGACC-GGCCGG TTGGTGCCTACCGGT TERM 690 585174 - 585214 + g 71 -4.6 -4.41137 | gap 1, overlap 585144 585194 GCGACGTAGCCGGGG GCGAT-GTCGGCGCCGACC GGCC GGTTGGTGCCTACCGGTGC TTTCTTGTCGTTCTG TERM 691 585249 - 585265 + g 93 -7.3 -5.1861 | overlap 585251 TTCCGCTTTTCCTTT TTCTTGG CTG CCAAGGA TTTTTTCCTCCTCCA Daud_0549 585643 - 586974 + | RNA modification protein TERM 692 587386 - 587414 + G 88 -7.4 -4.84359 | gap 1, overlap 587390 TACCGTAGCGGACTG CGACCCGGAGCGG GGGT CCGTTACGG-TCG TTTTTATGGAGGTCG Daud_0550 587231 - 588070 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 693 588245 - 588279 + G 71 -8.5 -3.88291 | opp_overlap 588240 AGGAGGCAAACTGCC GGCAGGGCTGTCC CGTCGGAGT GGACATCCCGGCC TTTATCGGGCTGATC TERM 694 588766 - 588811 + G 73 -8.1 -4.08216 | GACGAGCTTTTTGCC GAGGGGTTCGAGGCCGTGTAC ATCG GTACGGGGGCTGGCACCCCAC TTTTCCCGAACCTGC TERM 695 589194 - 589233 + G 72 -2.1 -4.72986 | gap 2, opp_overlap 589215, overlap 589197 589199 GGGTGAACCGGACGC CTCCGGGCGCCGCCAGCCA AACC TGG-TGCCGGGGTCTG-AG TTTTTCCTGGACGTG Daud_0551 588064 - 589503 + | glutamate synthase (NADPH), homotetrameric Daud_0552 589633 - 589980 + | hypothetical protein TERM 696 590066 - 590093 + F 100 -13.4 -4.48902 | AAGTTTGATTCAAGT GGCGGTCGGGGA GAGA TTCCCGGCCGTC TTTGTTTCGGTGTGT TERM 697 590242 - 590230 - g 74 -4.7 -4.55128 | opp_overlap 590238 590240, overlap 590214 590231 ACCGGGAAATCAAAA GCCGG TAT CCGGA TGCGATCCTGTTTTT TERM 698 590238 - 590252 + G 72 -4.2 -4.59773 | opp_overlap 590231 590230, overlap 590240 ATCAAAAGCCGGTAT CCGGAT GCG ATCCTG TTTTTCCAGATGGGC Daud_0553 590187 - 592835 + | DNA mismatch repair protein MutS TERM 699 593433 - 593443 + G 81 -6.8 -4.67982 | GGGAACGGTGGTGAC GGTC CGC GACC TTTTCTTCAATACGC Daud_0554 592996 - 594693 + | DNA mismatch repair protein MutL TERM 700 594844 - 594834 - g 73 -6.8 -4.36914 | GCCCTGCGCAGAAAA TCCG GGG CGGA AGCGGTGGTGGTAGT Daud_0555 594690 - 595493 + | hypothetical protein Daud_0556 595490 - 596422 + | tRNA delta(2)-isopentenylpyrophosphate transferase Daud_0557 596474 - 596725 + | RNA chaperone Hfq TERM 701 596725 - 596748 + G 91 -18.2 -3.14132 | opp_overlap 596713 596725 AAATGTCGGACAGTA GGGGCCCTTC CCAG GAAGGGCCCC TTGCTGAGAAGCGGA TERM 702 596748 - 596725 - g 86 -18.2 -2.63112 | opp_overlap 596725, overlap 596713 AAATGTCGGACAGTA GGGGCCCTTC CCAG GAAGGGCCCC TTGCTGAGAAGCGGA Daud_0558 596712 - 598013 + | aluminium resistance family protein Daud_0559 598027 - 598941 + | thioredoxin reductase TERM 703 599011 - 598997 - T 73 -5.6 -4.56597 | opp_overlap 598982 598977, overlap 598999 TCGGCCCGGCAAAAA CACGGT TTT ACCGGG CCCGATTCGTTTCAC TERM 704 599063 - 599041 - T 100 -14.2 -5.24129 | overlap 599042 CCGGGGCATAAAAAA CGCTGTACCG AAG CGGTACAGCA GAAAGGGAGAGGAGT TERM 705 599062 - 599042 - T 100 -15.5 -3.73995 | overlap 599041 CGGGGCATAAAAAAC GCTGTACCG AAG CGGTACAGC AGAAAGGGAGAGGAG Daud_0560 599957 - 599139 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 706 599997 - 600013 + H 78 -5.7 -4.78237 | opp_overlap 599990, overlap 599998 GGTAGAATCTGAGTA TCTCCGG GAA CCGGCGG TTTTATTATAGGGTG TERM 707 600070 - 600080 + H 77 -8.2 -4.07568 | opp_overlap 600050 600051 600070 600069, overlap 600051 TCGGGTCCTGAGAAG GCCC GGT GGGC TTTTGGGAAAGGAGA Daud_0561 600107 - 600481 + | hypothetical protein TERM 708 601642 - 601632 - g 79 -8.2 -4.25104 | overlap 601633 TGGCCCGGACGAAAA CCGG AGA CCGG GCCGAACTCAGCCTG TERM 709 601847 - 601834 - g 71 -5.9 -4.28254 | CCTGAAGATGGAAAA CCGAC TGCT GCCGG CATACGACGCCCTGG TERM 710 602037 - 602049 + G 83 -4.7 -5.03715 | GGGAGGCACTGCTGG CGGCG GTA CGGCG TTTTTTCGCCCTGCT Daud_0562 600494 - 603259 + | DNA polymerase III, epsilon subunit TERM 711 603413 - 603395 - f 80 -4.5 -5.0925 | overlap 603378 GGGCAAAATCAAAAA CCCGC TTTGGTTCT GCGGG TATAAGTTCTTCCGC TERM 712 603733 - 603757 + G 71 -8.4 -3.86194 | GGTGCTGAATTTCTC CCGGGCGGCG GCGGA CGGCGCCCAG TTTGTCAAAGAAGTT Daud_0563 603650 - 604285 + | putative heterodisulfide reductase, C subunit Daud_0564 604282 - 605133 + | CoB--CoM heterodisulfide reductase TERM 713 606747 - 606761 + G 76 -5.6 -4.56597 | opp_overlap 606729 606745 606746 606749, overlap 606731 606730 CGGCCGGTGGAAACC CACACC GGA GGGGTG TTTTTGGCCGGAACC Daud_0565 605154 - 607139 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 714 607285 - 607334 + G 70 -9.9 -3.57144 | gap 1, overlap 607247 607288 CTCCAGCCGCGTCGA TCCTGCCTTCGTCCTGCGCGCCTT CCA AAGGGGCGC-GGACGGGGTCCTGA TTTCCGGCTGACACC TERM 715 607429 - 607446 + G 72 -7.7 -4.15453 | gap 1 GCTTTTGGAGTACGC CGGCTTCG AGC CGA-GCCG TTTTCAGCTGCATTG Daud_0566 607130 - 607564 + | methyl-viologen-reducing hydrogenase, delta subunit TERM 716 607647 - 607674 + G 86 -8.4 -4.62336 | gap 1 CATCGGCTACGCGCC GGGCACCGACCTG GCC CGGGTCA-TGCCC TTTTTCGCGTCCAGT Daud_0567 607561 - 608547 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_0568 608573 - 609601 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_0569 609602 - 610447 + | oxidoreductase FAD/NAD(P)-binding subunit Daud_0570 611430 - 610543 - | hypothetical protein TERM 717 610967 - 611006 + g 70 -9.8 -3.54459 | overlap 610934 610968 610970 610975 CTTTCGCCGGCTTCG ACGTCCTGGCTGGCGAGG ATTT CCCCGCCGGCTTGGATGC TTTCGCCGACCTTGA TERM 718 610975 - 610998 + g 70 -11.6 -3.1634 | overlap 610934 610970 610968 610967 GGCTTCGACGTCCTG GCTGGCGAGG ATTT CCCCGCCGGC TTGGATGCTTTCGCC Daud_0571 611701 - 612156 + | hypothetical protein TERM 719 612206 - 612189 - T 72 -4 -4.78107 | GAGCATGAGCAAAAA GCCCAG AGCCTG CAGGGC GAAGCCGACGCGAAA Daud_0572 612562 - 612239 - | transcriptional modulator of MazE/toxin, MazF TERM 720 613536 - 613524 - g 74 -4.8 -4.67353 | CGACCTACTGAAAAA GGCT GTCGG AGCC GAGGCAATCCAACTG Daud_0573 612709 - 613686 + | hypothetical protein Daud_0574 613813 - 614442 + | hypothetical protein Daud_0575 614591 - 615067 + | 4-alpha-glucanotransferase-like protein Daud_0576 615515 - 615117 - | hypothetical protein TERM 721 615365 - 615387 + g 71 -9.1 -3.68351 | gap 1 CCGCGCGCCGCAGCA GGGGCTCGGC CCGG GCCG-GCTCC TTTAGGTCGTCAAAC TERM 722 615706 - 615727 + H 76 -10.2 -3.72576 | GCCTGTTCCAGCAGT TCCCGGAT GGTTTG ATCCGGGA TTTGATCGAGCAGAA Daud_0579 616999 - 617238 + | hypothetical protein TERM 723 619140 - 619120 - f 71 -4.6 -4.63218 | opp_overlap 619120 619121, overlap 619121 TGGGTTTCAAGAAAA CGTCTCCC TTCAT GGGTGACA TTTTCTCAGACCGCT TERM 724 619527 - 619499 - f 71 -7.4 -4.01071 | gap 2 ATAACACGAAGGAAA CGAAGCGCCGGAGC AGT GC-CCGGC-CTGCG CCCACCCCCGGAGTT Daud_0584 619608 - 619898 + | hypothetical protein Daud_0585 621246 - 619984 - | metal dependent phosphohydrolase TERM 725 622207 - 622184 - H 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 726 623103 - 623113 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC Daud_0587 622204 - 623535 + | transposase, IS4 family protein TERM 727 624051 - 624008 - gf 100 -18.8 -3.27544 | opp_overlap 624011, overlap 624011 624013 624014 GAAAACGACCACGAA CAACATGCTGGCCCGCATCC TGAG GGAGGCGGGCCAGCGGGTCG TGTGCAACCGGGAGG TERM 728 624048 - 624011 - gf 100 -16.9 -3.7614 | opp_overlap 624011, overlap 624008 624013 624014 AACGACCACGAACAA CATGCTGGCCCGCATCC TGAG GGAGGCGGGCCAGCGGG TCGTGTGCAACCGGG TERM 729 624011 - 624048 + GF 100 -19.1 -2.62184 | opp_overlap 624011 624008 624013 624014 AACGACCACGAACAA CATGCTGGCCCGCATCC TGAG GGAGGCGGGCCAGCGGG TCGTGTGCAACCGGG TERM 730 624046 - 624013 - gf 100 -18.1 -3.45742 | opp_overlap 624011, overlap 624011 624008 624014 CGACCACGAACAACA TGCTGGCCCGCATCC TGAG GGAGGCGGGCCAGCG GGTCGTGTGCAACCG TERM 731 624045 - 624014 - gf 100 -21.6 -2.66963 | opp_overlap 624011, overlap 624013 624011 624008 GACCACGAACAACAT GCTGGCCCGCATCC TGAG GGAGGCGGGCCAGC GGGTCGTGTGCAACC Daud_0588 623805 - 625214 + | hypothetical protein Daud_0589 625186 - 625911 + | glutamine amidotransferase Daud_0590 626018 - 626140 + | hypothetical protein TERM 732 626256 - 626274 + F 100 -9.5 -5.24796 | opp_overlap 626249, overlap 626262 ACCACTAATTCGTCG GGCCGTC GAAGA GGCGGCC TTTTTGTTGTGTGGG Daud_0591 626361 - 628256 + | putative serine protein kinase, PrkA Daud_0592 628282 - 629436 + | hypothetical protein Daud_0593 629454 - 630713 + | SpoVR family protein TERM 733 631612 - 631579 - g 76 -7.4 -4.35483 | overlap 631564 631581 631582 GCGGACGAGAACAAA GAG-GCCGCGCCCACC CGCT GGTG-ACGCGGCACAC CCGTAGAAGGATTGC Daud_0594 630767 - 631618 + | Ku domain-containing protein Daud_0595 632568 - 631675 - | PpiC-type peptidyl-prolyl cis-trans isomerase Daud_0596 632689 - 633621 + | ATP dependent DNA ligase Daud_0597 633813 - 634295 + | hypothetical protein TERM 734 634377 - 634397 + F 78 -6.1 -4.81852 | GTCTTTTATTCGGAC CGGGGGT TTGTGTC ACCCCTG TTTTCTTACTTGTCG Daud_0598 634666 - 635610 + | hypothetical protein Daud_0599 635641 - 636825 + | DNA protecting protein DprA TERM 735 638752 - 638721 - g 72 -13.7 -2.78816 | CGATCTTCGAGGAGA CCGGCCACCGC TGTCCCAAGT GCGGCGGCCGG GTGGTGGTCAGGCGG Daud_0600 636869 - 639004 + | DNA topoisomerase I TERM 736 640101 - 640114 + G 72 -3.7 -4.56597 | opp_overlap 640098, overlap 640098 640095 GCGGTTGTACAAGGG CCTGG AGCC CCTGG TTTTTCCGCCCGAGA Daud_0601 639004 - 640323 + | gid protein Daud_0602 640323 - 641276 + | phage integrase family protein Daud_0603 641379 - 641912 + | 20S proteasome, A and B subunits TERM 737 642895 - 642879 - g 72 -13.7 -2.77899 | overlap 642876 CGTGGTCACCAAGTA CGGTCCG GTA CGGACCG ACCACATGCTGTTCA Daud_0604 641935 - 643329 + | heat shock protein HslVU, ATPase subunit HslU Daud_0605 643352 - 644131 + | GTP-sensing transcriptional pleiotropic repressor CodY Daud_0606 644293 - 645027 + | ribosomal protein S2 Daud_0607 645101 - 645706 + | translation elongation factor Ts TERM 738 646215 - 646195 - g 90 -19.7 -2.64616 | TTTCGACGGACACGA CGGCCGCCC TGC GGGCGGCCG AGATCGAAGCCGAGG Daud_0608 645759 - 646520 + | uridylate kinase Daud_0609 646517 - 647041 + | ribosome recycling factor TERM 739 647282 - 647302 + F 85 -8.9 -4.46212 | opp_overlap 647280 ATTCAAAAGCAACGC CCCCCCTAG AAT TTCGGGGGG TTTTCTCATAGGAGG Daud_0610 647327 - 648085 + | undecaprenyl diphosphate synthase Daud_0611 648085 - 648864 + | phosphatidate cytidylyltransferase Daud_0612 650174 - 648945 - | chromate transporter Daud_0613 650518 - 650213 - | PadR-like family transcriptional regulator TERM 740 650854 - 650867 + G 77 -2.4 -5.08824 | GCTTCTGGTAACGTT GAAC TTGATT GTTC TTTTTTACATCGCGA Daud_0614 650789 - 651865 + | hypothetical protein TERM 741 652367 - 652422 + G 79 -11.1 -3.89346 | CAGTGCACCGCCTAC CGGCGGACCGAGGTGACCGGA-GTCGT CCTG ACGGCGTCCGGAGGCC-CGTTTCGCCG TTTCTCCCGTGAGGA Daud_0615 651887 - 653041 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 742 653072 - 653083 + G 77 -2.2 -5.06816 | CCGTAATTGTGGTAT TCGG TTTG CTGA TTTTTATTCACGAGT TERM 743 653468 - 653423 - g 100 -13.9 -4.57569 | gap 1 CCACTGTGGTAAAAA CCGTGCTGCCGGACCGGCCGGC GGC GGCGGCCGGTCTC-CAGCAGGG CGACCGGATCGTGGC Daud_0616 653041 - 654060 + | putative membrane-associated zinc metalloprotease Daud_0617 654153 - 655202 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 744 655470 - 655502 + G 72 -7.7 -4.11216 | CCGAGTTGTGGTTGC GTTCGGGTCGGTG GCACGTA TACGGACCCGAGC TTTTCCGGCTGAAGG Daud_0618 655226 - 656926 + | prolyl-tRNA synthetase TERM 745 657439 - 657413 - g 76 -6.4 -4.4891 | overlap 657414 CCCAGGAGGAGAAAA TCACTCAGGACG CGG CGGCCTGGGTGC GGAGCATCGCCGAGA TERM 746 657970 - 657989 + G 72 -7.8 -4.15006 | overlap 657971 GGTTCAATGATGCTT TTTGCCGG TAGC CCGGCAGG TTTTAAGGTGAATAT Daud_0619 656959 - 658290 + | hypothetical protein TERM 747 658356 - 658331 - f 70 -9.7 -3.40498 | gap 1, overlap 658329 GAACTGGTAATAATA CGGGTATCCGGA ACA CCCGG-CACCCG TTAAAACAAGAGAAA Daud_0620 658386 - 659171 + | band 7 protein TERM 748 659189 - 659220 + F 75 -3.6 -4.9725 | gap 1, opp_overlap 659184 659192 659194, overlap 659191 659192 659193 GCACCGAAAAGGCCC AAAGACC-CCGTCCG GTT TGGGCGGGGGTCGTC TTTTTGTGTCCGGGT TERM 749 659214 - 659194 - f 70 -9.6 -3.40843 | opp_overlap 659193 659192 659191 659189, overlap 659184 659192 GAAAAGGCCCAAAGA CCCCGTCC GGTTT GGGCGGGG GTCGTCTTTTTGTGT TERM 750 659423 - 659451 + F 85 -6.5 -4.87389 | overlap 659424 TGTTTATGTGTGGGG ACCGGGCCCGGGA GTT TACAGGGTCCGGC TTTGTTTTTGGGGTG TERM 751 659424 - 659450 + F 71 -10 -3.51349 | overlap 659423 GTTTATGTGTGGGGA CCGGGCCCGGGA GTT TACAGGGTCCGG CTTTGTTTTTGGGGT TERM 752 659592 - 659578 - g 93 -7.8 -5.14563 | CGGGCGAGCAAAAAA CGCCCA CGG TGGACG GCCTGCCGTTGGAAA TERM 753 659672 - 659656 - g 83 -5 -4.98255 | overlap 659657 TGGGAATCAGAAAAA TCCGCC TTACC GGCGGC GAGCCCCTGGTCCGT Daud_0621 659469 - 660452 + | molybdenum cofactor biosynthesis protein A TERM 754 660498 - 660486 - f 74 -7.7 -4.14615 | opp_overlap 660486 AAAAAGGTGGGAAAA GGTGT CAG ACACC TTTTTGCCTGGAGCA TERM 755 660486 - 660498 + F 83 -7.7 -4.65895 | opp_overlap 660486 AAAAAGGTGGGAAAA GGTGT CAG ACACC TTTTTGCCTGGAGCA TERM 756 660658 - 660636 - f 100 -13.4 -4.1721 | overlap 660637 AGTGAGACCTCAAAA CGGCTTCCCC TGA GGGGAAGCCC TCCCCGCCAAAGGAG TERM 757 660657 - 660637 - f 100 -16.9 -3.09844 | overlap 660636 GTGAGACCTCAAAAC GGCTTCCCC TGA GGGGAAGCC CTCCCCGCCAAAGGA TERM 758 661951 - 661939 - g 74 -4.8 -4.67353 | CGACCTACTGAAAAA GGCT GTCGG AGCC GAGGCAATCCAACTG Daud_0622 660683 - 662101 + | hypothetical protein TERM 759 662260 - 662276 + F 78 -5.8 -4.80396 | CAGCCTGATTCCGAA GTCGGC CCTAT GTCGAC TTTTTCAATGTTTTG Daud_0623 662307 - 663425 + | riboflavin biosynthesis protein RibD Daud_0624 663406 - 664053 + | riboflavin synthase, alpha subunit Daud_0625 664081 - 665289 + | GTP cyclohydrolase II Daud_0626 665310 - 665786 + | riboflavin synthase TERM 760 665874 - 665858 - T 100 -9.4 -5.0925 | opp_overlap 665858 GCGGAAAATGAAAAA CGGCTC TGCGC GAGCCG TTTCTATGTTTTCTA TERM 761 665858 - 665874 + T 84 -9.4 -4.36366 | opp_overlap 665858 GCGGAAAATGAAAAA CGGCTC TGCGC GAGCCG TTTCTATGTTTTCTA Daud_0627 666105 - 665914 - | ribosomal protein L28 Daud_0628 667179 - 666169 - | putative CoA-substrate-specific enzyme activase Daud_0629 669330 - 667180 - | hypothetical protein TERM 762 667392 - 667373 - G 76 -7.9 -4.26188 | GGCATACAGGTAAAA GGCATCA GGTGAA TGATGCC GTCGATCCCCTCCTG TERM 763 667655 - 667691 + g 76 -11.5 -3.68619 | ACCACCCAGATCTCA CCGACGATCCGGACCCG GAC CGGGTTGGTATCCTCGG TTTCGATGGCTTCCG TERM 764 668463 - 668479 + g 74 -5.1 -4.57755 | TTCCCTGCCGGGCGG CTTCCTC CTC GACGAAG TTTTCTATGATCGAT TERM 765 668826 - 668844 + g 78 -6.6 -4.56597 | opp_overlap 668817 668826 CCAGAATGCGGAAAG CGTCTGGC GTT GACAGGCG TTTTTCCACACACAA TERM 766 669123 - 669111 - G 87 -6.2 -5.12971 | overlap 669112 AACAGGGAATAAAAA GGCG GTCGA CGCC GCGGTCGAGCAACTC Daud_0630 669732 - 669992 + | small acid-soluble spore protein, alpha/beta type TERM 767 670036 - 670063 + T 100 -7.1 -6.00814 | gap 2, opp_overlap 670043, overlap 670034 GAAACCCCAGTTCCA GAGCAGA--CGGC GAAT GCCGGCTCTGCTC TTTTTTTTAGTTATT Daud_0631 671018 - 670074 - | spore protease TERM 768 671274 - 671264 - H 72 -2.4 -4.98255 | TGGGAAGGAGAAAAA GGTC TAT GTCC CTGGCAAGATGTGTT TERM 769 671794 - 671820 + G 71 -5.8 -4.32857 | gap 1 AATCTTCCTTCCGGC GGCC-CCCGTC CGAAAA GGTGGGCGGCC TTTATGTTTGGCGCC Daud_0632 671331 - 671894 + | putative methyltransferase TERM 770 671953 - 671969 + G 74 -5 -4.57569 | GCATCTGGACGTGAT CCAGCG GGCGG CGCAGG TTTTTGACCAGGTGG Daud_0633 671891 - 672382 + | pantetheine-phosphate adenylyltransferase Daud_0634 672372 - 672830 + | vacuolar-type H+-ATPase subunit H Daud_0635 673994 - 672813 - | nucleoside recognition domain-containing protein TERM 771 673217 - 673204 - G 77 -2.3 -5.03314 | GTCATCTCGAAAAAA CCGGT GGCG AGCGG CAGATTCAAGCCGGA Daud_0636 674139 - 674657 + | hypothetical protein Daud_0637 674658 - 674837 + | ribosomal protein L32 TERM 772 674860 - 674835 - f 80 -9.2 -4.17537 | opp_overlap 674835, overlap 674838 GTAAATAAGGACAAA TAAGCTTTTG GTTCAT CAAAAGCTTA TTTTTTTACCGTTAT TERM 773 674835 - 674860 + F 100 -9.9 -5.48303 | opp_overlap 674835 674838 GTAAATAAGGACAAA TAAGCTTTTGG TTCA TCAAAAGCTTA TTTTTTTACCGTTAT TERM 774 674857 - 674838 - f 70 -6.5 -4.1774 | opp_overlap 674835, overlap 674835 AATAAGGACAAATAA GCTTTTG GTTCAT CAAAAGC TTATTTTTTTACCGT Daud_0638 674940 - 675947 + | fatty acid/phospholipid synthesis protein PlsX TERM 775 675962 - 675923 - f 70 -6.5 -4.14739 | opp_overlap 675934, overlap 675927 GGACGTACGGGAAAA CGGAGCCGAAA-CCGCTGA TGGC TGAGCGGATTTCGGC-CGG AATCGTCGGCATCGG TERM 776 676250 - 676265 + G 74 -6 -4.39166 | opp_overlap 676240, overlap 676240 AGGAACGCCTGGGCT GCGGCC CGGT GGCGGC TTTTGATCTCTCCGC Daud_0639 675940 - 676968 + | 3-oxoacyl-(acyl-carrier-protein) synthase III Daud_0640 676983 - 677933 + | 2-nitropropane dioxygenase, NPD TERM 777 678032 - 678049 + G 76 -6.3 -4.4078 | gap 1 CGGATTTTCACCCGT GCCGATGA GAT TC-TCGGC TTTTCCTTGACCAAG TERM 778 678118 - 678102 - g 76 -6.5 -4.43189 | opp_overlap 678102 AGGAACTCCAGAAAA CGGCCAA TAC TCAGCCG GCCGTGTTTGCCACC TERM 779 678177 - 678167 - g 74 -5.4 -4.56597 | GTGCTCCGCGAAAAA GGAA TCC TTCC GGACGTGCTCGCTGG TERM 780 678313 - 678293 - g 81 -12.5 -3.68073 | CAGCTCATGCAAGAA GCCGTTCCC CTT GGGACCGGC GGCATGGTGGCCGTC Daud_0641 677930 - 678871 + | malonyl CoA-acyl carrier protein transacylase Daud_0642 678873 - 679616 + | 3-oxoacyl-(acyl-carrier-protein) reductase Daud_0643 679693 - 679926 + | acyl carrier protein TERM 781 679935 - 679953 + F 78 -6.7 -4.63218 | gap 1, overlap 679937 GAGTTAGCGCTCCCG GC-CCTCC TGGG GGAGGTGC TTTTGTTGCGGCCGC TERM 782 680546 - 680561 + G 73 -8.2 -4.09685 | AGCATCAATCACCCC GCTGGC ACTG GCCGGC TTTTGCGCGATGAAG Daud_0644 679959 - 681212 + | beta-ketoacyl synthase Daud_0645 681212 - 681919 + | ribonuclease III Daud_0646 681929 - 682843 + | signal recognition particle-docking protein FtsY TERM 783 683063 - 683079 + F 84 -9.4 -4.33182 | GAATTCTGGTTTACC GGGGCA TCGGC TGCCCC TTCTTTTGTGCATGA TERM 784 683315 - 683349 + G 86 -17.8 -2.52464 | TGCCTTTATGGCCCG CCACGGGCGGTGGCAC TCG GTGCCGCCGCACCTGG TCAATTACCGGGCCA Daud_0647 683163 - 684041 + | methylthioadenosine phosphorylase Daud_0648 684041 - 685087 + | aIF-2BI family translation initiation factor Daud_0649 685084 - 686337 + | adenosylhomocysteinase TERM 785 686410 - 686372 - f 89 -13.2 -3.56643 | opp_overlap 686385, overlap 686385 GTTAGAGGTGGGAAA GCGGTTGAGAAAAGGGGA CTG TCCCCTTTTCTCGATCTC ACCTCCAACCTCTCG TERM 786 686385 - 686397 + F 85 -9.1 -4.45083 | opp_overlap 686372 686385 AAGCGGTTGAGAAAA GGGGA CTG TCCCC TTTTCTCGATCTCAC TERM 787 686397 - 686385 - f 84 -9.1 -4.37658 | opp_overlap 686385, overlap 686372 AAGCGGTTGAGAAAA GGGGA CTG TCCCC TTTTCTCGATCTCAC TERM 788 686531 - 686493 - g 75 -2.9 -4.87893 | overlap 686495 AAGGCCAAGGAAAAA CTGGTCCGCTTGGGACA GAAGG TGGCCGAAGCGGGGCTG GTGATCGGTACCTGG Daud_0650 686460 - 687128 + | class II aldolase/adducin family protein TERM 789 687717 - 687707 - g 77 -2.4 -5.0538 | GCGTACCTGAAAAAA GTGG TGG CCGC GTCGGAAGAACTGGA TERM 790 688391 - 688365 - g 71 -9.5 -3.78775 | gap 2, opp_overlap 688372 CGGTTGATGAGGAAA CGGT--GCTCCGC CAG GCGGAGCGGACCG CGCGGCGGTTGATCG Daud_0651 687125 - 688417 + | amidohydrolase Daud_0652 688650 - 688420 - | hypothetical protein Daud_0653 690139 - 688736 - | aminotransferase class-III TERM 791 689556 - 689544 - G 74 -10.5 -3.78775 | opp_overlap 689544 GGCTCGACGATGAAA GCCGC CGC GCGGC CGGCTTTGAGGGCGG TERM 792 690319 - 690334 + H 100 -4.7 -5.7946 | opp_overlap 690319 GTGTGGCCTGAAAAC CCTTC CTCACC GAAGG TTTTTTTCTTGACAC Daud_0654 690409 - 690777 + | putative helix-turn-helix protein, YlxM/p13 family protein TERM 793 691176 - 691157 - g 70 -10 -3.62522 | gap 1, opp_overlap 691160, overlap 691160 CAATCTCCTCAAGAA GCA-GGGCC GCC GGCCCTTGC TGGTGGCGGCCGACG Daud_0655 690777 - 692135 + | signal recognition particle protein TERM 794 692339 - 692360 + G 71 -8.7 -3.86015 | gap 1 CGTGGTCTCCGATGC CCGTTCG-CC CCG GGACGGACGG TTTATCGAGCAAATA Daud_0656 692265 - 692543 + | ribosomal protein S16 Daud_0657 692546 - 692773 + | hypothetical protein Daud_0658 692813 - 693193 + | hypothetical protein Daud_0659 693186 - 693698 + | 16S rRNA processing protein RimM Daud_0660 693695 - 694444 + | tRNA (guanine-N1)-methyltransferase Daud_0661 694536 - 694883 + | ribosomal protein L19 TERM 795 694888 - 694923 + F 83 -9.8 -4.07568 | gap 1, opp_overlap 694888 694895, overlap 694893 694896 AGACCAAATAGTATA GTATAGAGGGGGGCTGC GAG GCAGTTCCC-TCTTTAC TTTTGCCACGGAGGG TERM 796 694893 - 694918 + F 77 -8.3 -4.19735 | gap 1, opp_overlap 694888 694895, overlap 694888 694896 AAATAGTATAGTATA GAGGGGGGCTGC GAG GCAGTTCCC-TC TTTACTTTTGCCACG TERM 797 694896 - 694916 + F 79 -11.1 -3.695 | opp_overlap 694895 694888, overlap 694893 694888 TAGTATAGTATAGAG GGGGGCTGC GAG GCAGTTCCC TCTTTACTTTTGCCA Daud_0662 694947 - 695471 + | signal peptidase I TERM 798 695832 - 695816 - g 72 -4.3 -4.57569 | overlap 695817 695828 695829 GGACCTTCTGAAAAA CCCGGCT GGA AACCGGC CTCGGGCCTACCGGG Daud_0663 695493 - 696347 + | GTP-binding protein, HSR1-related Daud_0664 696337 - 697140 + | ribonuclease H Daud_0665 698365 - 697187 - | poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) TERM 799 697933 - 697955 + g 75 -12 -3.63515 | TGGCCAGCACTCCTT CCACATCCTG ATC CAGGCTGTGG TTGTTAGCCGTCAAG Daud_0666 698542 - 698892 + | hypothetical protein Daud_0667 699930 - 698905 - | radical SAM domain-containing protein TERM 800 698941 - 698965 + g 76 -5.7 -4.57569 | overlap 698942 GGATTCCGGGAACAG CGCCTTGGTTT TTG AAATCAGGGCC TTTTTGGCGGCCTCC TERM 801 699062 - 699090 + g 74 -9.5 -3.86346 | overlap 699066 CCCAACATGGGTAGC CTGGTCCGGGGGA AAA TCTCCCGGATTCG TTTCTCGGCCCGTGC TERM 802 699066 - 699086 + g 77 -13.3 -3.6053 | overlap 699062 ACATGGGTAGCCTGG TCCGGGGGA AAA TCTCCCGGA TTCGTTTCTCGGCCC Daud_0668 700241 - 701419 + | extracellular ligand-binding receptor TERM 803 701901 - 701920 + G 74 -5.6 -4.52669 | TGGGTCTTGGGGCTG GCCGTCGT CTGC GTGGCGGC TTTATTTGCGTTCTT TERM 804 702292 - 702313 + G 71 -11.5 -3.53012 | overlap 702291 702304 CGGTCATGCTGGTGC GCCCCACGG GCAT CCTTGGGGC TTTCCGGCGCGAAGG Daud_0669 701448 - 702332 + | inner-membrane translocator TERM 805 703020 - 703030 + G 73 -8.2 -4.06179 | overlap 703009 CTTCCTCGCCGGCCT GGCC GGC GGCC TTTATGCCTTTTACA TERM 806 703117 - 703152 + G 73 -8.2 -4.1021 | gap 1, overlap 703114 703100 703118 ATGGCCGTCGTGGGG GGCG-CGGCCACCGTTT GGG GACCGGTGGTCGGCGCG TTTGTCATTGTCGGC Daud_0670 702352 - 703359 + | inner-membrane translocator Daud_0671 703347 - 704105 + | ABC transporter related TERM 807 704546 - 704573 + G 95 -10.4 -4.43307 | opp_overlap 704535, overlap 704557 CAGATGCTGGCCATC GGCCGGGGGCTG ATGG CGGCCCCACGCC TTCTTTTGTTGGACG TERM 808 704557 - 704576 + G 74 -4.9 -4.63218 | opp_overlap 704535, overlap 704546 CATCGGCCGGGGGCT GATGGCG GCCCCA CGCCTTC TTTTGTTGGACGAAC Daud_0672 704102 - 704821 + | ABC transporter related Daud_0673 705193 - 705954 + | methyltransferase type 11 TERM 809 706335 - 706325 - g 78 -5.4 -4.69664 | opp_overlap 706331 706333 GAGATGACTGAAAAA GAGT TTT ACTC CTTCAAGGAGTATGG Daud_0674 706067 - 707212 + | beta-ketoacyl synthase TERM 810 707317 - 707337 + G 100 -6.2 -5.75342 | gap 1, opp_overlap 707316 707317 707319, overlap 707331 TCTTCAGGAGAGAAC CACGA-GCA TTGC TGCATCGTG TTTTTTTTAGCACGA TERM 811 707755 - 707770 + G 74 -6.1 -4.42386 | TGCGCTACTTCATCG GAGGC ATTCTG GCCTC TTTTGTCGCTGGCAG TERM 812 709629 - 709643 + G 76 -5.6 -4.56597 | opp_overlap 709628 709626 709630, overlap 709630 GCCAAGGAAAAGGAC AGGGTC TTC GACCCG TTTTTCACCACCAAG Daud_0675 707220 - 709787 + | multi-sensor signal transduction histidine kinase TERM 813 710264 - 710225 - gf 93 -2.7 -5.58209 | gap 2, overlap 710226 CGAAACCTAAAAAAA CCGGCC-GACC-GTGCGGA ATAC CCCGCTCAGGTCAGGTCCG CAGTCCCAAACAGGC Daud_0676 709850 - 711862 + | multi-sensor signal transduction histidine kinase TERM 814 712091 - 712043 - gf 84 -2.1 -5.30616 | opp_overlap 712052, overlap 712044 GGAGGTAAAGAAAAA GGTTCCGGAGACGGAGGTGGTGA TGA TTACCGCCTACGCCTCCGTTGAC ACGGCCGCCAGCGCC Daud_0677 711828 - 712859 + | response regulator receiver modulated metal dependent phosphohydrolase TERM 815 713394 - 713377 - g 71 -9.1 -3.75153 | gap 1, overlap 713378 TTGGCGCAACTCAAA CGGGGCCG GTT CGGCCC-G CTGGTGGCCGAGGCC Daud_0678 712957 - 713685 + | nitroreductase TERM 816 714555 - 714536 - g 87 -5.6 -5.1861 | gap 1 TTTACGACGAAAAAA CCG-GCTGC CTG GCGGCGCGG GCGGCGTGGGGCATC TERM 817 715495 - 715505 + G 71 -5.4 -4.48823 | TACCCTGATTACCCT TCTC ACC GAGA TTTTGTGCGTTCATT Daud_0679 713878 - 715593 + | metal dependent phosphohydrolase TERM 818 715612 - 715633 + T 100 -17.3 -3.64703 | opp_overlap 715583, overlap 715608 715606 TCCCCTCAAGCCTGC GGCGCGGCT TATG AGCCGCGCC TTTCCCTCGCCGCCC Daud_0680 717787 - 715748 - | methyl-accepting chemotaxis sensory transducer TERM 819 717050 - 717078 + g 81 -13.8 -3.57263 | opp_overlap 717046 717045 GATCAGATAAGCGTA GGCCGAGGGCCG GCCGA CGGCCTTCGACC TTTCGGCGTACCCGT TERM 820 717820 - 717833 + r 71 -9.5 -3.55444 | opp_overlap 717792, overlap 717821 CGCGGCGCGGCAGTC GCGGG GGTA CCCGC TTTAGCGGGTCGGCC TERM 821 717821 - 717851 + r 72 -11.1 -3.01791 | gap 1, opp_overlap 717792, overlap 717820 GCGGCGCGGCAGTCG CGGGGGT-ACCCGC TTTA GCGGGTCGGCCCCG TCTTACACCCCCCGT TERM 822 718201 - 718223 + r 76 -3.3 -5.12617 | CAAGCGTATGGTATC CGGTTAGGG GTAAA TCCAGACCG TTTTTTAGATAATTA Daud_0681 719247 - 718228 - | queuosine biosynthesis protein TERM 823 718799 - 718815 + g 79 -9.3 -4.14243 | opp_overlap 718792, overlap 718800 TTAATGTAGGGAGGC AGGGGCG TCT CGCCCCA TTTTCCCATAGCCTC TERM 824 718800 - 718814 + g 71 -12.8 -3.08224 | opp_overlap 718792, overlap 718799 TAATGTAGGGAGGCA GGGGCG TCT CGCCCC ATTTTCCCATAGCCT TERM 825 719441 - 719428 - R 70 -9.5 -3.3334 | AACGCTACGTCACAA CGCCG ATTT CGGCG ATGATCACCCTCGCA Daud_0682 720078 - 719446 - | exopolysaccharide synthesis, ExoD TERM 826 719476 - 719488 + g 75 -3.3 -4.93877 | ATTTGTCCACCCCCG GGAAG CTC CATCC TTTTCTTTAATGAAG Daud_0683 720264 - 720085 - | hypothetical protein TERM 827 720477 - 720452 - R 76 -11.7 -3.12936 | overlap 720444 ACGCAAACCTGAACA CCACGGCCCGG CATA CCTGGCCGGGG GTGAAGGATCTGGAA Daud_0686 721591 - 720767 - | hypothetical protein Daud_0687 722389 - 721610 - | hypothetical protein TERM 828 722278 - 722266 - G 74 -4.8 -4.62069 | GGTCGAGGTTAAAAA GCCA CAGTT TGGC GATCAAAGGTGTGTA TERM 829 723035 - 723021 - g 77 -2.7 -5.06414 | overlap 723022 CGGTTTGAAGAAAAA CCCGG ACTTG CCGGT CGATGATATGTTCGT Daud_0688 722806 - 723174 + | hypothetical protein TERM 830 723580 - 723590 + G 78 -3.2 -5.08255 | TTCCCGGACGAAAAG GCTT TTA AGGC TTTTGTTTTCGACCT Daud_0689 723178 - 724581 + | putative circadian clock protein, KaiC TERM 831 724697 - 724675 - g 70 -10 -3.6682 | opp_overlap 724670 724667 GGTCATGGACGCAAA CATTTACATC TTT GATGCAAATG GTGGCTCTTTTTCCC Daud_0690 724592 - 726007 + | diguanylate cyclase TERM 832 726491 - 726481 - g 73 -8.2 -4.08767 | opp_overlap 726481 GTGAGGTGCTGAAAA CGGC GCA GCCG TTGATCGTGGAAGAT Daud_0691 726123 - 727301 + | metal dependent phosphohydrolase Daud_0692 727373 - 728131 + | anti-sigma-factor antagonist Daud_0693 728121 - 728483 + | anti-sigma-factor antagonist TERM 833 728618 - 728629 + F 80 -4.4 -5.1244 | opp_overlap 728602 GGCCAAGCAACTTGC CCAA GAGC TTGG TTTTTCTCTTGCTGA TERM 834 729296 - 729284 - g 75 -4.1 -4.71426 | GGCGCAGGAAGAAAA GCTCT TAA AAAGC CGCAACAAAGTGCGA Daud_0695 728868 - 730262 + | putative methyl-accepting chemotaxis sensory transducer Daud_0696 730661 - 731287 + | stage II sporulation E family protein TERM 835 731508 - 731521 + G 72 -3.7 -4.57073 | opp_overlap 731507 AGTGGATATACATAG CCCGG GCGA CCGAG TTTTTGGCCCAGATC TERM 836 731842 - 731853 + G 71 -5.8 -4.25104 | overlap 731839 ATTTGTAATTGTCCT TCCG GCGA CGGA TTTTGCTAAAGCCAG Daud_0697 731288 - 732082 + | diguanylate cyclase TERM 837 733330 - 733314 - g 73 -6.6 -4.34482 | opp_overlap 733324 TGCGGGAAAAAAAGA GCTCTT GGGCG AAGAGC AAGCTTTTCTTTATT Daud_0698 732089 - 733813 + | diguanylate cyclase/phosphodiesterase Daud_0700 734818 - 735177 + | hypothetical protein Daud_0701 736212 - 735199 - | hypothetical protein TERM 838 735832 - 735816 - G 71 -11.5 -3.51232 | overlap 735812 TCGGCGTGAAAGTAA CGGGGAC GCC GCCCCCG GCCAGGTCGCAAACG TERM 839 735986 - 735968 - G 84 -11 -4.21631 | opp_overlap 735981 AACTGATTCAAGAAA TCCAGGAG CGG CTCCCGGA TCGGGTTGGTGGTGG Daud_0702 736622 - 736927 + | hypothetical protein Daud_0703 736924 - 737280 + | IS66 Orf2 family protein TERM 840 737845 - 737813 - g 81 -7.5 -4.43213 | overlap 737814 737815 GGGAAGACATCAAAA CCCCCATCGTCACCG CCC CGATGCCGGCGGCGG TACTGCCGGGAAGCC Daud_0704 737323 - 738894 + | transposase IS66 Daud_0705 739583 - 738954 - | hypothetical protein Daud_0706 740493 - 739597 - | copper amine oxidase domain-containing protein TERM 841 739909 - 739928 + g 71 -5.6 -4.33274 | GTACTGGCAACCGTT CCGGTGAT ACTT AGCGCCGG TTTTAGTGATGTACA Daud_0707 741519 - 740665 - | hypothetical protein Daud_0708 743211 - 741574 - | DNA methylase N-4/N-6 domain-containing protein TERM 842 741954 - 741967 + g 84 -2.3 -5.29716 | opp_overlap 741944, overlap 741955 TGGAACCGTCAACGC CGGTG TCCG CACCC TTTTTCTTATCTTGG Daud_0709 744772 - 743624 - | hypothetical protein Daud_0710 745595 - 744858 - | putative prophage repressor Daud_0711 746299 - 745742 - | NERD domain-containing protein Daud_0712 746830 - 747357 + | copper amine oxidase domain-containing protein TERM 843 747645 - 747635 - g 74 -5.4 -4.56775 | AGGGCGCTGGAAAAA CTGA CCG TCAG GACCGAACCCCGCAC TERM 844 747862 - 747852 - g 71 -8.2 -3.95852 | overlap 747853 AGGCCAGGAACGAAA GGCG TGT CGCC GAAGGCAAAAAGCCG TERM 845 747889 - 747874 - g 72 -2.5 -4.74103 | overlap 747853 CGCCGAAGGCAAAAA GCCGA TACCTT TCGAC GAGCACCCGCCAAAG Daud_0713 747443 - 748825 + | IS605 family transposase OrfB TERM 846 749519 - 749494 - g 93 -7.5 -5.03145 | overlap 749516 CAACCGCTCAAAAAA CAGCCCCGCTT CAAA AAGAAGGGCCG GGACGACAGCTTCCG TERM 847 749871 - 749859 - g 90 -2.7 -5.40072 | GGCCCGCCAAAAAAA GTTCT CCG AAAAC TGGCGAAAGACCAGA Daud_0714 749188 - 750333 + | IS605 family transposase OrfB TERM 848 750361 - 750343 - f 77 -7.3 -4.26189 | opp_overlap 750345 GCATAAACCTTAAAA CGCCGCG GGGCA CGCGGTG TCTGCCTGTAGAGGG Daud_0715 750359 - 751183 + | hypothetical protein Daud_0716 751267 - 752091 + | hypothetical protein Daud_0717 752428 - 752868 + | hypothetical protein TERM 849 753171 - 753140 - f 100 -15.9 -4.12133 | opp_overlap 753148, overlap 753141 CTAAACATCAAACAA TCGGACAAGGGCG GGTTCA CGCCCTTGTCCGG GTACGGAGTTGGAGG TERM 850 753170 - 753141 - f 100 -19.4 -3.06195 | opp_overlap 753148, overlap 753140 TAAACATCAAACAAT CGGACAAGGGCG GGTTCA CGCCCTTGTCCG GGTACGGAGTTGGAG Daud_0718 753180 - 753662 + | hypothetical protein TERM 851 753767 - 753777 + F 81 -6.8 -4.76963 | CCCCGGAATTAATGT GAGC TTA GCTC TTTTATCTTCTGTAG TERM 852 754610 - 754623 + F 73 -5.9 -4.4767 | TATGTGGGTGGAGTG GCTGC AACT GCGGC TTTTGTCCTGGCTGC TERM 853 754931 - 754961 + F 100 -19.7 -3.03124 | opp_overlap 754931 754932 AGGTGAAGCAACGAA CGGGGACCGGGCC TGCGC GGCCCGGTCCCCA TGTTCACCCCTGCCA TERM 854 754961 - 754931 - f 100 -21.9 -3.45634 | opp_overlap 754931, overlap 754932 AGGTGAAGCAACGAA CGGGGACCGGGCC TGCGC GGCCCGGTCCCCA TGTTCACCCCTGCCA TERM 855 754960 - 754932 - f 100 -23.2 -2.66899 | opp_overlap 754931, overlap 754931 GGTGAAGCAACGAAC GGGGACCGGGCC TGCGC GGCCCGGTCCCC ATGTTCACCCCTGCC Daud_0719 754996 - 755358 + | hypothetical protein Daud_0720 755681 - 755887 + | hypothetical protein TERM 856 755958 - 755923 - f 76 -10.4 -3.65425 | gap 1 TTGAGATAGCTGAAA TCGTCCCGGGAGGCCCC CTG GGGAGATCCCGGGA-GA AAGGGAGGTGGTGCG TERM 857 756089 - 756124 + F 81 -2.6 -5.42975 | overlap 756075 756090 CGGTTCTGTGGGTGA ACCCTTCTGAGAAG TATCAAGT TTTCTTGGAAGGGA TTTTTGTTTCTGTAG Daud_0721 756258 - 757994 + | transposase Daud_0722 758165 - 758713 + | hypothetical protein TERM 858 759182 - 759161 - gf 81 -7.9 -4.46493 | opp_overlap 759160, overlap 759151 759164 TGAAAGACATCAAAA CCACGGACC CTGA GGTCCGCCG GATCTTGACCCAAAA TERM 859 759179 - 759164 - gf 71 -10.4 -3.17875 | opp_overlap 759160, overlap 759151 759161 AAGACATCAAAACCA CGGACC CTGA GGTCCG CCGGATCTTGACCCA TERM 860 759355 - 759368 + GF 70 -6.7 -4.07687 | ACCACTTTGGCAGCA GCGAT TATT ATCGC TTTTGACACCACGGT Daud_0723 758869 - 759549 + | hypothetical protein Daud_0724 759506 - 759856 + | hypothetical protein Daud_0725 760160 - 760423 + | TPR repeat-containing protein Daud_0726 760500 - 760694 + | hypothetical protein TERM 861 760928 - 760940 + G 80 -6.2 -4.72272 | GGAGGTGAACGACCC CGCG CTAGT CGCG TTTTTCGTGCGCCAA TERM 862 761135 - 761151 + G 72 -7.9 -4.18506 | overlap 761120 GTGGGTGGAATTGTC GCCCGCT TTC AACGGGC TTCTTTTCAGCCTCG Daud_0727 760749 - 762026 + | hypothetical protein Daud_0728 762101 - 762460 + | hypothetical protein TERM 863 762498 - 762481 - f 72 -4.1 -4.82901 | overlap 762483 CCTTCCGCATAAAAA CAGGTTA AAAA TAACCAG TAAAGGAGGGGTATG TERM 864 763238 - 763256 + G 72 -4.4 -4.64676 | TCCATGAAACTAACC GTGGCGGG CTG CTCACCGC TTTTCTTAACGATGA Daud_0729 762514 - 763794 + | copper amine oxidase domain-containing protein Daud_0730 764287 - 765108 + | hypothetical protein TERM 865 765167 - 765134 - f 87 -15.9 -2.87564 | gap 1, opp_overlap 765136 765137 GGAGGGTCGGACAGA GGTCGCCGTCCGGGCC TGC GGC-CGGCCGGCGGCC CGGCAAGGAGCTTTT TERM 866 765136 - 765178 + F 73 -5.3 -4.66833 | gap 1, opp_overlap 765134, overlap 765137 AGGGTCGGACAGAGG TCGCCGT-CCGGGCCTGCGG CCGG CCGGCGGCCCGGCAAGGAGC TTTTTGCAATTGGGG Daud_0731 765204 - 766916 + | WD40 domain-containing protein TERM 867 767863 - 767896 + F 76 -8.9 -3.9461 | gap 1 GGACCAATGAGTATG CG-GGTGCGGTTGAAT ATA ATACAACCGCACGACG TTGTTATTGACGAAA TERM 868 769024 - 769053 + G 93 -7.7 -5.24129 | gap 1, opp_overlap 769024 CCGTGGTGCAGCACA CCGG-GCTTCCGCC CGA GGCAGTGGCGCCGG TTTTTTATGCCAGCG TERM 869 769063 - 769079 + G 74 -13.7 -2.89564 | CGCCGGTTTTTTATG CCAGCGG TGA CCGCTGG TATGTCGCCTACGGG Daud_0734 768678 - 769925 + | hypothetical protein TERM 870 769959 - 769974 + F 71 -8.2 -3.91084 | overlap 769970 769972 CGAGGCGGTTTTTGC CTGCGG GTTG CCGCGG TTTCGTTAGCCGTCG Daud_0735 770099 - 770410 + | hypothetical protein TERM 871 770468 - 770451 - f 79 -2.7 -5.22258 | opp_overlap 770451 GAAATGAAAAGAAAA GGCTAAT TATT ATTACCC TGTTTGTTTCACTGT Daud_0736 770498 - 770740 + | hypothetical protein Daud_0738 771538 - 772080 + | hypothetical protein TERM 872 772875 - 772885 + F 81 -2.4 -5.28942 | overlap 772858 772859 CGCCCGACGGAAGCT GCCG GCC CGCC TTTTTGTTTCCGATC TERM 873 772945 - 772919 - f 95 -10 -4.78157 | opp_overlap 772931 772932 772943, overlap 772921 AGGAAAAAGAACAAA GCGCCTGCCGGG ATG CCGGGCAGACCC TGGCGATTTTACCGG Daud_0740 773265 - 773825 + | hypothetical protein TERM 874 775132 - 775089 - T 71 -10.9 -3.22476 | gap 1 ATTACGCACGACCAA CGGGCTCG-AGCGGCTGAAC GCGGA GATCCGCCGCCGCGAGCGCG TGATCCGGATTTTCC Daud_0742 777303 - 775660 - | copper amine oxidase domain-containing protein TERM 875 775986 - 775996 + g 88 -8.2 -4.67982 | opp_overlap 775985 CCGCTTCAGAATTAG CGGG GGT CCCG TTTTGTTGCCTGGGA Daud_0743 778546 - 778028 - | integrase, catalytic region TERM 876 778321 - 778331 + g 84 -2.4 -5.27335 | TCCGCCGCATTAGCC GCAG CAC CCGC TTTTTATTTACCACG Daud_0744 778870 - 778643 - | transposase IS3/IS911 TERM 877 778861 - 778879 + g 100 -3.8 -5.79588 | GTTTTCTCTTGTCCA TGAGCTCC ATT GTAGCTTA TTTTTTTGGTTTTAG Daud_0745 779146 - 780528 + | signal transduction histidine kinase regulating citrate/malate metabolism Daud_0746 780551 - 781333 + | response regulator receiver protein TERM 878 781327 - 781315 - f 82 -5.5 -5.03314 | opp_overlap 781315 GGCAGCCGGAAAAAA CACCG ATA CGGTA ATTTGAAACATTGAT Daud_0747 781500 - 781943 + | hypothetical protein TERM 879 782293 - 782272 - g 74 -9.3 -3.84961 | CAGTTAAGCATTAAA GCCCCGCCG GTCA CGGCGACGC TGGACCTGGCAGAAA Daud_0748 782008 - 782562 + | hypothetical protein Daud_0749 782552 - 783058 + | hypothetical protein Daud_0750 783534 - 783202 - | plasmid stabilization system protein TERM 880 783465 - 783445 - GT 78 -6.7 -4.57073 | opp_overlap 783445 GACCTGCGCCAAAAA GCGGACGTG CTG CACGAGCGC TTCTCCAGCCCGTTC Daud_0751 783793 - 783503 - | prevent-host-death family protein TERM 881 783943 - 783959 + r 78 -6.5 -4.56597 | overlap 783930 783945 TGCTGGTCTTCAGTC TGGCCAG TTA CTGGCTG TTTTTCGGGAGACAC TERM 882 783945 - 783957 + r 73 -9.1 -3.90048 | overlap 783930 783943 CTGGTCTTCAGTCTG GCCAG TTA CTGGC TGTTTTTCGGGAGAC Daud_0752 785076 - 784144 - | hypothetical protein Daud_0753 785346 - 785086 - | hypothetical protein Daud_0754 787030 - 785354 - | hypothetical protein TERM 883 786882 - 786829 - G 76 -8.2 -4.18934 | gap 3 GAGCACGGTAAGAAA TCC-CCTCGCCATCCCGTGCCA-CGGC ACA GCCGCCGGC-CAGGATTGCCAGGCAGA TAATGGCAACCAGCA TERM 884 787052 - 787068 + r 76 -9.4 -4.06993 | opp_overlap 787050, overlap 787055 CGCGGCCCTAATACT CCGGGA CCAGC TCCCGG TTCTTTCGTCTATAC TERM 885 787287 - 787297 + r 95 -8.2 -4.98436 | opp_overlap 787287 787285 CGCCGCAACGGAAGA CCCC AAT GGGG TTTTTGTGGTATTCA Daud_0755 787767 - 787264 - | hypothetical protein Daud_0757 788293 - 788883 + | SOS-response transcriptional repressor, LexA TERM 886 789343 - 789332 - g 70 -7.2 -4.07568 | CCCTGGCCCTCAAAA GGCG CATC CGCC GCGAGGTGGGCGTAA Daud_0758 788944 - 790131 + | DNA-directed DNA polymerase TERM 887 790196 - 790207 + G 70 -7.2 -4.07133 | opp_overlap 790191, overlap 790182 GCGGCGAAACGCTGT GCGG ACTG CCGC TTCTTTGTCAGGATC TERM 888 790371 - 790394 + G 76 -8 -4.25283 | overlap 790372 CGGTCTCCCGCGGCG ACCCGAACGC TCAG GCGTGCGGGC TTTTCCTCCCCAGGT Daud_0759 790121 - 790447 + | hypothetical protein Daud_0760 790519 - 790734 + | hypothetical protein TERM 889 790844 - 790822 - f 74 -7.6 -4.15222 | opp_overlap 790835, overlap 790823 AGGTGCCGGAAGAAA GCCCTGCGCC GGG AGCACAGGGA GGAATGCCTGTGCGT TERM 890 790843 - 790823 - f 72 -11.1 -3.08812 | opp_overlap 790835, overlap 790822 GGTGCCGGAAGAAAG CCCTGCGCC GGG AGCACAGGG AGGAATGCCTGTGCG TERM 891 791378 - 791402 + F 74 -10.8 -3.49114 | gap 1, overlap 791379 791380 791395 GGTTACTTTCCGTTT TA-CCCAGGCC AGTC GGCCTGGGCTA TTCTAGTCTAGTATC TERM 892 791379 - 791400 + F 75 -11.5 -3.31365 | overlap 791378 791380 791395 GTTACTTTCCGTTTT ACCCAGGCC AGTC GGCCTGGGC TATTCTAGTCTAGTA TERM 893 791380 - 791399 + F 83 -15 -2.58337 | overlap 791379 791378 791395 TTACTTTCCGTTTTA CCCAGGCC AGTC GGCCTGGG CTATTCTAGTCTAGT TERM 894 791450 - 791473 + F 93 -10.2 -4.4009 | opp_overlap 791465 791466, overlap 791451 791452 AGGTCATAGGGTCGA ATCCCGGGGT GAAA ACCCCGGGGC TTTTATAAGATAGCC TERM 895 791451 - 791472 + F 87 -13.7 -3.23733 | opp_overlap 791465 791466, overlap 791450 791452 GGTCATAGGGTCGAA TCCCGGGGT GAAA ACCCCGGGG CTTTTATAAGATAGC TERM 896 791452 - 791471 + F 83 -15 -2.53918 | opp_overlap 791465 791466, overlap 791451 791450 GTCATAGGGTCGAAT CCCGGGGT GAAA ACCCCGGG GCTTTTATAAGATAG Daud_0762 791555 - 792877 + | IS605 family transposase OrfB Daud_0763 793363 - 793088 - | XRE family transcriptional regulator Daud_0764 793713 - 793360 - | hypothetical protein Daud_0766 794168 - 794410 + | hypothetical protein Daud_0767 794559 - 794768 + | hypothetical protein TERM 897 794893 - 794915 + F 100 -10.7 -5.0925 | opp_overlap 794892 794895 GGGGTGGTTACGAAG TAGCCCAAT ATCGG ATTGGGCTA TTTTTCGTTTTGCGG TERM 898 795303 - 795259 - f 89 -16.4 -2.68009 | gap 1, overlap 795256 795255 795284 AAAAGAGAGAAGGGA TGCGG-CGTGAGGGGCCGGAT TCAA ACCCGGCCCTCCCCGGCCGCA GAAAACCGCTGGAAA TERM 899 795308 - 795324 + F 100 -3.6 -5.76949 | opp_overlap 795309, overlap 795309 CCCCGGCCGCAGAAA ACCGCT GGAAA AGCGGG TTTTTTTTCAAGGTA TERM 900 795323 - 795309 - f 74 -7.1 -4.36914 | opp_overlap 795309 795308 CCCGGCCGCAGAAAA CCGCT GGAAA AGCGG GTTTTTTTTCAAGGT Daud_0768 795365 - 795616 + | hypothetical protein Daud_0769 795613 - 795801 + | hypothetical protein TERM 901 795916 - 795881 - f 71 -7.5 -3.92592 | opp_overlap 795885, overlap 795883 795885 ACCGGCAATAGCAAA GAGAGGCCGGAGGCT AACGGA AGCTTCCGGCCTTTT TCGTTTTCCAGGAGA TERM 902 795914 - 795883 - f 71 -10.1 -3.55084 | opp_overlap 795885, overlap 795881 795885 CGGCAATAGCAAAGA GAGGCCGGAGGCT AACGGA AGCTTCCGGCCTT TTTCGTTTTCCAGGA TERM 903 795912 - 795885 - f 84 -12.7 -3.34589 | opp_overlap 795885, overlap 795883 795881 GCAATAGCAAAGAGA GGCCGGAGGCT AACGGA AGCTTCCGGCC TTTTTCGTTTTCCAG TERM 904 795885 - 795912 + F 100 -14.9 -5.0925 | opp_overlap 795885 795883 795881 GCAATAGCAAAGAGA GGCCGGAGGCT AACGGA AGCTTCCGGCC TTTTTCGTTTTCCAG TERM 905 796145 - 796124 - f 93 -17.3 -2.89564 | overlap 796137 GGCGGACGTGAGAGA GGGCCGGGA GAGA TCCCGGCCC CCGGTAAAACAACCA TERM 906 796385 - 796363 - f 100 -13.4 -4.1721 | overlap 796364 AGTGAGACCTCAAAA CGGCTTCCCC TGA GGGGAAGCCC TCCCCGCCAAAGGAG TERM 907 796384 - 796364 - f 100 -16.9 -3.09844 | overlap 796363 GTGAGACCTCAAAAC GGCTTCCCC TGA GGGGAAGCC CTCCCCGCCAAAGGA TERM 908 797678 - 797666 - g 74 -4.8 -4.67353 | CGACCTACTGAAAAA GGCT GTCGG AGCC GAGGCAATCCAACTG Daud_0770 796410 - 797828 + | hypothetical protein Daud_0771 798042 - 800684 + | diguanylate cyclase with PAS/PAC sensor Daud_0772 800681 - 800815 + | hypothetical protein TERM 909 801533 - 801551 + G 78 -10.3 -4.07568 | opp_overlap 801527 CCGGAGACATCTCAA TCGCCGA GTGGG TCGGCGA TTTTAAGCCCGAGGA Daud_0773 801028 - 802497 + | hypothetical protein Daud_0774 803008 - 803241 + | ISPsy22, transposase truncated TERM 910 803404 - 803417 + T 75 -3.7 -4.86731 | overlap 803405 ACCGCTTCTTACCCG CCGGC TTAC GCCGC TTTTCTTTCCGGCCA Daud_0775 804373 - 803513 - | phage integrase family protein TERM 911 804423 - 804440 + r 71 -4.7 -4.65512 | AAACCGGCCTTTACG GGGTGTC CTTT GCCGCCC TTTTGTGCTTATTTT Daud_0776 805840 - 805469 - | helix-turn-helix domain-containing protein TERM 912 805663 - 805690 + g 81 -7.8 -4.39426 | gap 1, opp_overlap 805658, overlap 805663 805664 805666 CTCCCACTAACTCGT C-CAGCGAGAC GCCGAAG GTCTCGCTGAG TTTTATCAGGGTGTC TERM 913 805852 - 805878 + H 86 -9.6 -4.24602 | opp_overlap 805857, overlap 805849 805854 TCATGCAGTCGCCCC CATAAGGTTTCT ATT AGAAACCTTATC TTGTTTTGGATATCT TERM 914 805854 - 805876 + H 83 -12.2 -3.71224 | opp_overlap 805857, overlap 805852 805849 ATGCAGTCGCCCCCA TAAGGTTTCT ATT AGAAACCTTA TCTTGTTTTGGATAT TERM 915 806109 - 806096 - g 72 -2.3 -4.75308 | overlap 806107 ACCAACATCGAAAAA GGGCA CAAA CACCC GTCACTGGTCACCGC Daud_0777 805982 - 806233 + | XRE family transcriptional regulator Daud_0778 806444 - 809536 + | hypothetical protein TERM 916 809618 - 809661 + G 75 -14.5 -2.78384 | overlap 809633 809635 CTGCTCGCGGCAGTT GTGGCTGGGGGGCTGGCCT TCGCGC AGGGCAGCCCCTCAGCGCC TGTCCTGCCGCAGAG Daud_0779 809552 - 811633 + | S-layer domain-containing protein TERM 917 811643 - 811688 + T 100 -12.8 -4.43272 | gap 1, opp_overlap 811648 811651 AGGTAAAAGTAATCG TGAAAGAGGGGCCC-GCCTAA GAAGA TTAGGTTGGGCCCTTCTTTAA TTTTAAATTTTAGGT Daud_0780 813199 - 811781 - | hypothetical protein TERM 918 811931 - 811943 + g 74 -4.8 -4.67353 | CAGTTGGATTGCCTC GGCT CCGAC AGCC TTTTTCAGTAGGTCG TERM 919 813224 - 813246 + H 100 -13.4 -4.1721 | overlap 813225 CTCCTTTGGCGGGGA GGGCTTCCCC TCA GGGGAAGCCG TTTTGAGGTCTCACT TERM 920 813225 - 813245 + H 100 -16.9 -3.09844 | overlap 813224 TCCTTTGGCGGGGAG GGCTTCCCC TCA GGGGAAGCC GTTTTGAGGTCTCAC Daud_0781 813249 - 813581 + | hypothetical protein Daud_0783 814100 - 814753 + | CRP/FNR family transcriptional regulator TERM 921 814782 - 814817 + F 72 -12 -2.78596 | gap 1, opp_overlap 814775 TGACCATATCGAGTA GGG-TAACGCCATAGTA ATT TGCTATGGCGTCATCCC TCTCATAGAACCGTA Daud_0784 814985 - 816307 + | transposase, IS605 OrfB TERM 922 816583 - 816597 + T 74 -7.2 -4.15854 | opp_overlap 816595, overlap 816595 CTGGTTAATTATCCC TGGTAT AAT ATACCA TTTTGGGATGGCTTT Daud_0786 817915 - 816986 - | retron-type reverse transcriptase-like protein TERM 923 818646 - 818671 + H 100 -8.1 -5.96219 | opp_overlap 818646 CGGGCGCACAAAAAA GGCCGGGCGCT TTTG GGCGGCCGACC TTTTTTTTGTCACTG TERM 924 818671 - 818646 - H 100 -9.6 -5.24129 | opp_overlap 818646 CGGGCGCACAAAAAA GGCCGGGCGC TTTTGG GCGGCCGACC TTTTTTTTGTCACTG Daud_0787 818866 - 820341 + | sodium/sulphate symporter Daud_0788 820357 - 822096 + | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Daud_0789 822116 - 822439 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 925 822474 - 822440 - f 89 -13.5 -3.53712 | gap 1, overlap 822436 ACGCGTAACAAGTAA CGGTG-TGCGGGGGTG GTGA CACCCCCGCGGCGCCG CAATGGGAAGAGGGA Daud_0790 822495 - 824597 + | methyl-viologen-reducing hydrogenase, delta subunit TERM 926 826383 - 826366 - g 83 -7.7 -4.65078 | AGATCGCCAACAAAA GCCTACG CGCG CGTAAGC AGTGGCCCGAGACAG Daud_0792 825117 - 826850 + | transposase, IS4 family protein TERM 927 827022 - 827036 + F 100 -6.4 -5.46657 | GAAGCAGGGAACCGG TTCGCT AAG GGCGAA TTTTTTGTTCGCATA Daud_0793 827152 - 827658 + | hypothetical protein TERM 928 828042 - 828024 - g 72 -4.4 -4.56597 | overlap 828009 828026 GCTGCGCCCCAAAAA CCCGCGGC CCA GCCGGAAG ACCTTAATGAGAGCG Daud_0794 827685 - 828668 + | nuclease TERM 929 828682 - 828692 + F 76 -3.2 -5.02476 | opp_overlap 828679 AGAAAGGAACGACCG CTGT TGA ACGG TTTTTTGGACCATCT TERM 930 828711 - 828721 + G 76 -8.2 -4.1891 | TTTGGACCATCTCAA GGCC CGC GGCC TTTCTGTTCAAACGG Daud_0795 828685 - 829536 + | phage integrase family protein Daud_0796 833438 - 829755 - | hypothetical protein TERM 931 833290 - 833266 - G 72 -12.1 -3.3164 | overlap 833267 AAGCCAGGTGTACAA CGTCCGTGGCA GTG TGCCACGGCCA GGTGAACAAGGGTCT TERM 932 833289 - 833267 - G 71 -13.4 -2.58663 | overlap 833266 AGCCAGGTGTACAAC GTCCGTGGCA GTG TGCCACGGCC AGGTGAACAAGGGTC Daud_0797 835161 - 833593 - | hypothetical protein TERM 933 836241 - 836272 + H 100 -5.8 -5.76949 | opp_overlap 836245 836246, overlap 836246 GACTTCTATAGTGAA GCAAGGCCGGGTAT GCGC GTACCCGGCTTTTA TTTTTTTTAGAGATA TERM 934 836246 - 836267 + H 100 -12.3 -5.66926 | opp_overlap 836245 836246, overlap 836241 CTATAGTGAAGCAAG GCCGGGTAT GCGC GTACCCGGC TTTTATTTTTTTTAG Daud_0799 837185 - 839452 + | phosphoadenosine phosphosulfate reductase TERM 935 841640 - 841652 + G 91 -9.1 -4.57569 | opp_overlap 841632, overlap 841634 AAGCCAACGCGTAGC CGCGT GCA ACGCG TTTTTGAAGGAGTGC Daud_0800 840152 - 842965 + | hypothetical protein TERM 936 843185 - 843171 - g 71 -5.6 -4.30576 | TTTTGAGCAGGAAAA TCCGGG TCT CCTGGA AAAGGCTCGGAAGTT Daud_0801 843004 - 844299 + | hypothetical protein TERM 937 845455 - 845467 + G 88 -7.7 -4.84359 | CTTTACACCGTCTTG CCTGT TTG ACAGG TTTTTCTGAAGATGA Daud_0802 844326 - 846644 + | hypothetical protein TERM 938 847931 - 847947 + G 73 -10.9 -3.61715 | opp_overlap 847931 847920 TAAAGCGCCTCACAA CAGCTTG GCT CAAGCTG TTGTTCCCGCACGTA Daud_0803 846655 - 848112 + | ATP-dependent protease La Daud_0804 848363 - 849316 + | hypothetical protein Daud_0807 850542 - 851015 + | hypothetical protein Daud_0808 851248 - 852807 + | beta-lactamase domain-containing protein TERM 939 853738 - 853753 + G 100 -11.8 -5.93252 | opp_overlap 853736 853738 CGCCGATAAGGAATA CCCGCC AAAC GGCGGG TTTTTTCTTTTTCAG TERM 940 853753 - 853738 - g 72 -11.8 -3.29325 | opp_overlap 853738, overlap 853736 CGCCGATAAGGAATA CCCGCC AAAC GGCGGG TTTTTTCTTTTTCAG Daud_0809 853688 - 854020 + | hypothetical protein TERM 941 854160 - 854187 + F 85 -15.6 -2.52795 | ATCCACAGGCAGGTG CCGGTATCCGGG TGGA CACGGATACCGG TACGTTCAAAACCTT Daud_0810 854266 - 854604 + | hypothetical protein TERM 942 855088 - 855069 - f 79 -13.6 -2.75382 | overlap 855066 GATCTGAGTCAACTA CCCCCTAC TGAA GTAGGGGG CTTGCGGTGACGAGC TERM 943 855752 - 855739 - g 74 -5.9 -4.42238 | CTATCGCAAGCAAAA GCAGG AGTA CCCGC CCAGTATCCGTGCCG Daud_0812 855362 - 855961 + | hypothetical protein TERM 944 855992 - 855966 - f 84 -6.4 -5.07567 | overlap 855967 GGAGATCTTAAAAAA CCGGCAGCCGCT AAA ACCGGCTGTCGC AATAGAAAGGAGAAT TERM 945 855991 - 855967 - f 74 -9.9 -3.63817 | overlap 855966 GAGATCTTAAAAAAC CGGCAGCCGCT AAA ACCGGCTGTCG CAATAGAAAGGAGAA Daud_0813 856012 - 856587 + | hypothetical protein Daud_0814 856829 - 857719 + | hypothetical protein TERM 946 858431 - 858448 + G 76 -9.1 -4.10161 | opp_overlap 858423 858427 GCCGAAATCCAGACC GGGCTGG ACGC CCAGCTC TTTTCCGAAGTGGTA Daud_0815 857723 - 859669 + | TRAG family protein TERM 947 859700 - 859719 + F 100 -12.2 -5.45802 | GAACCTTTCCAATGG CCGGGTAT GCGC ATACCCGG TTTTTGTTTTCAGGG TERM 948 859968 - 859954 - gf 87 -8.6 -4.55295 | overlap 859959 CGGGCCAGAAAGAAA CAGAAC GTC GTTCTG ACTACGGCTACTGCC TERM 949 861229 - 861241 + GF 74 -10.5 -3.61398 | opp_overlap 861229, overlap 861211 TCGGCTTTTGATGAA GGCGC GAT GCGCC TTCTTCACGACGGCA Daud_0816 859747 - 861804 + | DEAD/DEAH box helicase domain-containing protein TERM 950 862825 - 862813 - gf 74 -4.8 -4.67353 | CGACCTACTGAAAAA GGCT GTCGG AGCC GAGGCAATCCAACTG Daud_0817 861776 - 862975 + | hypothetical protein TERM 951 863248 - 863267 + F 100 -6.3 -5.79635 | opp_overlap 863247 863246, overlap 863250 GTGCCGACAAAAGCG GACCGGG AATTAC CCCGGCC TTTTCTTTTTTTTTT TERM 952 864236 - 864248 + G 72 -2.6 -4.67943 | opp_overlap 864219, overlap 864235 864232 864239 AGCAGTTAAGACTGC GCTG GAGAG CGGC TTTTCTATCTTGACC Daud_0818 863295 - 865361 + | RecD/TraA family helicase TERM 953 865350 - 865368 + F 100 -13.1 -5.61881 | opp_overlap 865346 CTCCTGAGAGACGCG CCCCGCC GTTAA GGCGGGG TTTTTGTTTTTCAGG Daud_0819 865577 - 867199 + | recombinase TERM 954 868116 - 868129 + GF 77 -2.3 -5.08824 | GTGGCGGCGATGAAC CCGTG CCCC TGCGG TTTTTTCGGTGACAC Daud_0820 867051 - 868595 + | Mg chelatase, subunit ChlI Daud_0821 868741 - 869112 + | hypothetical protein TERM 955 869523 - 869511 - g 80 -4.7 -4.86731 | TTTTTGCAAAGAAAA GCGGC AGA GCTGC TCAAGCAAGACCAAG Daud_0822 869112 - 869975 + | diguanylate cyclase Daud_0823 872498 - 870231 - | diguanylate cyclase with PAS/PAC sensor Daud_0824 873634 - 872495 - | hypothetical protein TERM 956 872738 - 872756 + g 72 -4.4 -4.55128 | opp_overlap 872732, overlap 872739 CGCCCGAAACACGTC TCGCGCTG CTC CGGCGAGG TTTTCCTTTCGGCCT TERM 957 874207 - 874218 + G 78 -3.6 -5.00616 | AGAGGGCGGCCTGGT GTCC CTGG GGGC TTTTTTGACCGGCCG Daud_0825 874070 - 874747 + | phosphoserine phosphatase-like hydrolase Daud_0826 874894 - 875295 + | hypothetical protein TERM 958 875286 - 875301 + F 76 -11.8 -3.01712 | opp_overlap 875285 875282 875281 875296 GCACGTGAAAGTGAC CGCCGG ATAA CCGGCG TGTTAGCCACCGGGC TERM 959 875381 - 875391 + G 74 -2.4 -4.91109 | GGTGGTGAGAAATGT GGCC CAG GGCA TTTTTGTGGTCGGGA Daud_0827 875379 - 875636 + | hypothetical protein Daud_0828 876215 - 875646 - | hypothetical protein TERM 960 876601 - 876562 - g 71 -8.6 -3.8917 | GCCCAACCAGAACAA GACCACCAAGTACGAG CACATCCT CCCGCAGTTGGTGGCC CTTGAGCAGCACCCG Daud_0829 876329 - 877129 + | peptidase S14, ClpP Daud_0830 877126 - 877335 + | hypothetical protein TERM 961 877366 - 877408 + F 70 -9.1 -3.65522 | GACAACCAAACAACT CCCCGC-TGCGGTCGGGCGTG CCT CAC-TGCGGCCGCACGCCGGG TTCTTCGGCTACCTG TERM 962 878156 - 878172 + G 78 -12.3 -3.79906 | opp_overlap 878155 878152 GCACCTGAAGAGCAT CCTGGTG CAC CACCAGG TTATTCTGCCGGTCA Daud_0831 877875 - 878288 + | hypothetical protein Daud_0832 878301 - 878702 + | hypothetical protein TERM 963 878895 - 878909 + G 76 -5.7 -4.62069 | opp_overlap 878893 878892, overlap 878893 GACCCGGCAAAACGG TGGTG ATCGC CACCA TTTTTCCGCTGGCCG Daud_0833 878741 - 879778 + | periplasmic solute binding protein Daud_0835 880137 - 880922 + | putative undecaprenol kinase TERM 964 880954 - 880925 - T 100 -12.8 -4.36914 | gap 1, opp_overlap 880924, overlap 880927 GCTGCGGGGATAAAA CTGGAGCGGCCCG TCCGC CGGGCCGC-CCTG ATACGTTAGTGCAGT TERM 965 880952 - 880927 - T 81 -14 -2.52946 | gap 1, opp_overlap 880924, overlap 880925 TGCGGGGATAAAACT GGAGCGGCCCG TCCGC CGGGCCGC-CC TGATACGTTAGTGCA TERM 966 880985 - 881003 + T 85 -6.7 -4.92314 | overlap 880978 GATTTCTTGGCCGCG TCCTGGG CCTTC TCCAGGA TTTTTCTGAGTTCCT Daud_0836 881436 - 880960 - | hypothetical protein Daud_0837 881622 - 883805 + | cell divisionFtsK/SpoIIIE Daud_0838 884009 - 884734 + | XRE family transcriptional regulator Daud_0839 884712 - 886064 + | MiaB-like tRNA modifying enzyme YliG Daud_0840 886120 - 886728 + | hypothetical protein TERM 967 888068 - 888055 - g 72 -3.7 -4.61231 | TGAGATTCTGAAAAA CCAGG AGAG CCGGG TCCGGGAGAATCTGA Daud_0841 886712 - 888187 + | vesicle-fusing ATPase Daud_0842 888287 - 889528 + | competence/damage-inducible protein CinA TERM 968 889563 - 889581 + F 100 -11 -4.93968 | ATGGGGAAAGGCCGA GGCTCTTC TGT GAAGGGCC TTTTTGCTTGTGGGT Daud_0843 889721 - 890758 + | recA protein Daud_0844 890799 - 891455 + | nuclease TERM 969 891962 - 891937 - g 93 -7.5 -5.03145 | overlap 891959 CAACCGCTCAAAAAA CAGCCCCGCTT CAAA AAGAAGGGCCG GGACGACAGCTTCCG TERM 970 892314 - 892302 - g 90 -2.7 -5.40072 | GGCCCGCCAAAAAAA GTTCT CCG AAAAC TGGCGAAAGACCAGA Daud_0845 891631 - 892776 + | IS605 family transposase OrfB TERM 971 892804 - 892786 - f 77 -7.3 -4.26189 | opp_overlap 892788 GCATAAACCTTAAAA CGCCGCG GGGCA CGCGGTG TCTGCCTGTAGAGGG TERM 972 892921 - 892897 - f 76 -12.2 -3.07816 | gap 1 TGGTTACCCAGGGAA TCCC-ACCCCC TTCA GGGGGTCGGGA GGATGTCAAAATAAA Daud_0846 893036 - 893194 + | small, acid-soluble spore protein, alpha/be TERM 973 893206 - 893242 + T 85 -16 -2.59534 | gap 1, opp_overlap 893213, overlap 893213 893223 893224 893225 GTAAGACTCTCCCGA ACC-GAAAGGCACCCCT TTCA AGGGGTGCCTTTCAGGC CTTCCTATGGTTGCT TERM 974 893213 - 893234 + T 100 -15.9 -3.58037 | opp_overlap 893213, overlap 893206 893223 893224 893225 TCTCCCGAACCGAAA GGCACCCCT TTCA AGGGGTGCC TTTCAGGCCTTCCTA TERM 975 893234 - 893213 - T 100 -15.9 -3.75153 | opp_overlap 893213 893206 893223 893224 893225 TCTCCCGAACCGAAA GGCACCCCT TTCA AGGGGTGCC TTTCAGGCCTTCCTA Daud_0847 895199 - 893247 - | copper amine oxidase domain-containing protein TERM 976 893999 - 894022 + g 72 -2.4 -4.8048 | gap 1, overlap 893980 893979 894000 GGACGGCCTCCGTCC CCG-GGTTTTG GGC CAGAACCGCGA TTTTTAGTCTGCCGC Daud_0848 896029 - 895340 - | hypothetical protein TERM 977 895500 - 895456 - G 74 -10.6 -3.79906 | opp_overlap 895461, overlap 895457 CGATTCCCAGAATAA CCAGTCCCCCGGAGGCGG TGAGTTCGG CCACCACCGAGGGGCTGA TGAAGGCGGCAGCCC TERM 978 896048 - 896079 + r 88 -13.2 -3.34088 | gap 1, opp_overlap 896057, overlap 896049 896057 ATTTGTTACTCCCAT C-CCGAAAAAGGTGT CAG GCACCTTTTTCGGTG TTCCTGTGTGCTCGT TERM 979 896049 - 896077 + r 100 -16.9 -3.23492 | opp_overlap 896057, overlap 896048 896057 TTTGTTACTCCCATC CCGAAAAAGGTGT CAG GCACCTTTTTCGG TGTTCCTGTGTGCTC TERM 980 896057 - 896069 + r 76 -5.5 -4.75308 | opp_overlap 896057, overlap 896049 896048 TCCCATCCCGAAAAA GGTGT CAG GCACC TTTTTCGGTGTTCCT TERM 981 896069 - 896057 - R 71 -4.8 -4.59773 | opp_overlap 896049 896048 896057 TCCCATCCCGAAAAA GGTG TCAGG CACC TTTTTCGGTGTTCCT Daud_0849 898554 - 896113 - | glycoside hydrolase family protein TERM 982 897429 - 897445 + g 75 -4.3 -4.71426 | overlap 897419 CGCTCCAGGGGTCCT GGAGCAG GAC TTGCGCC TTTTCTTCGTAGCGA TERM 983 897910 - 897892 - G 77 -3.8 -4.82901 | gap 1, overlap 897894 GGCGTTGTAGAAAAA GAGGCCG ATGGAG CGGCC-C GCCTTCAGGTTCAGC TERM 984 897909 - 897894 - G 70 -7.5 -4.03995 | overlap 897892 CGTTGTAGAAAAAGA GGCCG ATGGAG CGGCC CGCCTTCAGGTTCAG Daud_0851 902085 - 898759 - | trehalose synthase TERM 985 902299 - 902282 - H 76 -9.9 -3.79162 | opp_overlap 902280 GTGACAGAAAATTAA CCAGACA CATC TGTCTGG ACTCTATTCCTGATT TERM 986 902942 - 902906 - g 89 -10.7 -4.39002 | overlap 902907 902909 AAACCCTCTACAAAA TCACCAGCGACCTCGCC CAC GGCAACGTCGCCGGGGT GTACCACTTCCTGGT TERM 987 902941 - 902907 - g 80 -14.2 -3.22678 | overlap 902906 902909 AACCCTCTACAAAAT CACCAGCGACCTCGCC CAC GGCAACGTCGCCGGGG TGTACCACTTCCTGG TERM 988 902939 - 902909 - g 83 -15.4 -3.1733 | overlap 902907 902906 CCCTCTACAAAATCA CCAGCGACCTCGCC CAC GGCAACGTCGCCGG GGTGTACCACTTCCT Daud_0852 902413 - 903141 + | hypothetical protein Daud_0853 903452 - 903138 - | hypothetical protein Daud_0854 903575 - 904513 + | muramoyltetrapeptide carboxypeptidase TERM 989 904667 - 904701 + F 72 -2.6 -4.83615 | overlap 904673 TCGAGAAGAACATGT GGAGTCGGCCGGCC TTGATTT GACCGGCCTTATCC TTTTTATGGCCCGTC TERM 990 905299 - 905320 + G 81 -12.3 -3.88787 | gap 1, opp_overlap 905298 905295 GGAAGACCAGATCAC CACGGACGCG GAG CGCG-CCGTG TTTCTGCCCCTGTCG Daud_0855 904988 - 906640 + | methyl-accepting chemotaxis sensory transducer Daud_0856 908405 - 906738 - | hypothetical protein Daud_0857 908648 - 909712 + | hypothetical protein TERM 991 909791 - 909757 - T 100 -10.6 -4.74801 | opp_overlap 909764 CAACGCCAGCAAAAA CCCGAAACCCCGTCCC ACA GGGGTGGGGTTTTAGG CGACTCCCGTCCACG TERM 992 909764 - 909784 + T 95 -12.5 -4.08767 | opp_overlap 909757 AGCAAAAACCCGAAA CCCCGTCCC ACA GGGGTGGGG TTTTAGGCGACTCCC TERM 993 909877 - 909844 - T 100 -13.1 -4.4959 | opp_overlap 909847 909850, overlap 909846 909847 TCCAAGCAACCAAAA CACCAAGGCCTCCCG ATCC CGGGAGGCCTTGTCT TAATCCGGTTTGGTG TERM 994 909875 - 909846 - T 100 -17.9 -3.85043 | opp_overlap 909847 909850, overlap 909844 909847 CAAGCAACCAAAACA CCAAGGCCTCCCG ATCC CGGGAGGCCTTGT CTTAATCCGGTTTGG TERM 995 909847 - 909874 + T 100 -21.4 -3.16288 | opp_overlap 909847 909846 909844, overlap 909850 AAGCAACCAAAACAC CAAGGCCTCCCG ATCC CGGGAGGCCTTG TCTTAATCCGGTTTG TERM 996 909874 - 909847 - T 100 -21.4 -2.89941 | opp_overlap 909847 909850, overlap 909846 909844 AAGCAACCAAAACAC CAAGGCCTCCCG ATCC CGGGAGGCCTTG TCTTAATCCGGTTTG TERM 997 909850 - 909871 + T 100 -17.3 -3.71552 | opp_overlap 909847 909846 909844, overlap 909847 CAACCAAAACACCAA GGCCTCCCG ATCC CGGGAGGCC TTGTCTTAATCCGGT Daud_0858 910742 - 910128 - | hypothetical protein Daud_0859 911698 - 910919 - | thiazole biosynthesis enzyme TERM 998 911812 - 911829 + H 95 -5.5 -5.40474 | GATACTCTTATGTTG CCCGG GGACGTGA CCGGG TTTTTTTGAACCGCT Daud_0860 912080 - 912571 + | TrkA domain-containing protein TERM 999 913696 - 913714 + G 82 -5.9 -4.82901 | opp_overlap 913711, overlap 913702 GGCCCCGAAGTGGGC CCGGTGG GTCAA CGACCGG TTTTTCTGCAAGCCG Daud_0861 912575 - 913762 + | sodium/hydrogen exchanger Daud_0862 914060 - 915127 + | glycosyl transferase, group 1 Daud_0863 915124 - 917565 + | mannose-1-phosphate guanylyltransferase (GDP) TERM 1000 917834 - 917849 + G 70 -11.8 -3.14132 | opp_overlap 917834 917831, overlap 917846 917847 GCTGATGGATAACTA CCGGGC CGTC GCCCGG TTCATCCCGGAGGGC Daud_0864 917598 - 919067 + | glycosidase, PH1107-related Daud_0865 919171 - 921462 + | glycosyl transferase, group 1 TERM 1001 921761 - 921771 + F 73 -5.4 -4.62783 | opp_overlap 921745, overlap 921745 TGTGCCGGCTTTTAG CTTG ACA CAAG TTTTTGGGGTAGATA TERM 1002 921823 - 921801 - f 91 -7.7 -4.9725 | gap 1, opp_overlap 921801 ACCCGTATACAAAAA GCGTC-CCGG TTTT CCGGAAACGC TTCTATTCGCGGGTT TERM 1003 922151 - 922135 - f 80 -9.4 -4.07568 | GGCGGTCCTGGAAAA CCTCGC CGTTC GCGAGG GCCACGGACAAACAC TERM 1004 922194 - 922166 - f 71 -9.5 -3.5511 | gap 1, overlap 922164 GGCCACGGACAAACA CGCGC-CGCCGG CGGAAT CCGGTGTGCGCG CTTAGGCATAGGCCG Daud_0866 922442 - 924505 + | 4-alpha-glucanotransferase TERM 1005 924528 - 924540 + F 73 -10.5 -3.32022 | CCGCGCTGACCGGGG CCCCG GAC CGGGG TTCGTCTGTAAGGGA TERM 1006 924879 - 924894 + G 70 -10.4 -3.61398 | opp_overlap 924874 TTTTGAAAAGTTGCA CCGGTC TTTT GACCGG TTCTTGGACAGCCAC Daud_0867 924679 - 925059 + | hypothetical protein TERM 1007 925152 - 925124 - f 100 -13.9 -4.62069 | GCCTGACGTCAAAAA GCGGGTTCAGC GATTTCA GCCGAACCCGC GCCCTTGATCCTATT Daud_0868 925495 - 925851 + | hypothetical protein Daud_0869 925918 - 927051 + | hypothetical protein TERM 1008 927861 - 927919 + G 79 -15.2 -2.9155 | gap 1, overlap 927905 CTGCTGCACCAGGGT ACCCGCACCGCGCTGGCGGACGGCTGG GGTGGG TCGGT-GATCGCCACCGCGGTGCGGGA TGTCCTGTTCGGAAC TERM 1009 928669 - 928717 + G 81 -13.8 -3.54129 | gap 2 CGGCGCTGGCCTGCG CCCGGGATGG-GCTGCTGGT-GCC GGA GGCGGCCGACAGCGCCGGCCCGGG TTTGCGGGAGGTCTG TERM 1010 929116 - 929088 - g 100 -18.2 -3.98661 | gap 1, opp_overlap 929088 929088 CACATCGAGGAGAAA CGCCGCGCCCTCG GCAT CGAGGGC-CGGCG GGAGCGCGTGTTGTA Daud_0870 927279 - 929165 + | carbon-monoxide dehydrogenase, catalytic subunit TERM 1011 929973 - 929949 - g 76 -7.8 -4.30576 | gap 1, overlap 929951 GGTCGACGACGAAAA GTGCGCTCACG CGGC CG-GAGCGCTC AACTTCGGGTTCCCG TERM 1012 930976 - 931005 + G 75 -4.4 -4.77036 | overlap 930969 930968 GGCTGTTTCGAAGCG CTCGTGTGCA-TCG TGCC CGAGTGCA-ACGGG TTTTTGATCGTGAAC TERM 1013 931047 - 931029 - g 75 -13.8 -3.06261 | CGTGAACCGGGAACA CGCCGGGA TGA CCCCGGCG GGCATGACCTTTTCC Daud_0871 929158 - 931365 + | CO dehydrogenase/acetyl-CoA synthase complex, beta subunit TERM 1014 931398 - 931368 - f 76 -12 -3.01791 | opp_overlap 931364 931369 931377, overlap 931377 ACCGCTCTTTTAAGA GGCCAAAAAGGTGT CAG ACACCTTTTTGACT TCAATTTAAATCACG TERM 1015 931369 - 931397 + F 87 -13.3 -3.29324 | opp_overlap 931368 931377, overlap 931364 931377 CCGCTCTTTTAAGAG GCCAAAAAGGTGT CAG ACACCTTTTTGAC TTCAATTTAAATCAC TERM 1016 931389 - 931377 - f 83 -7.7 -4.66953 | opp_overlap 931369 931364 931377, overlap 931368 TTAAGAGGCCAAAAA GGTGT CAG ACACC TTTTTGACTTCAATT TERM 1017 931377 - 931389 + F 86 -7.7 -4.75776 | opp_overlap 931377 931368, overlap 931369 931364 TTAAGAGGCCAAAAA GGTGT CAG ACACC TTTTTGACTTCAATT Daud_0872 931438 - 932769 + | CO dehydrogenase/acetyl-CoA synthase delta subunit Daud_0873 932792 - 934684 + | ferredoxin TERM 1018 935359 - 935414 + G 77 -14 -3.30159 | gap 2, overlap 935407 GTGGGATCTGGAGGG CCGGCCGC-TGGTGGC-ACTGCCGGA CGACGC TCCGGCGGTCGCGGCCGTGCGGCGGG TTGTGCGCCGCTTCG Daud_0874 934688 - 935464 + | cobyrinic acid a,c-diamide synthase Daud_0875 935482 - 936462 + | CO dehydrogenase/acetyl-CoA synthase delta subunit TERM 1019 936482 - 936494 + F 79 -7.7 -4.48333 | opp_overlap 936482, overlap 936489 TAAAGTCGCGAACCA GGTGT CAG ACACC TTTTCATTGGTGTCT TERM 1020 937415 - 937459 + G 82 -14.5 -3.34239 | opp_overlap 937420 937422, overlap 937414 937416 937420 GCAGGAGTCAGGAGT TAGAATACAGGAGTCAGAGTT CTG AATTCTGACTCCTGAATTCCG TATTCTGTCCCTCTA TERM 1021 937416 - 937458 + G 77 -15.8 -2.60061 | opp_overlap 937420 937422, overlap 937415 937414 937420 CAGGAGTCAGGAGTT AGAATACAGGAGTCAGAGTT CTG AATTCTGACTCCTGAATTCC GTATTCTGTCCCTCT TERM 1022 937420 - 937454 + G 83 -15.2 -3.23183 | opp_overlap 937420 937422, overlap 937416 937415 937414 AGTCAGGAGTTAGAA TACAGGAGTCAGAGTT CTG AATTCTGACTCCTGAA TTCCGTATTCTGTCC TERM 1023 937454 - 937420 - g 74 -13 -3.37975 | opp_overlap 937420 937416 937415 937414, overlap 937422 AGTCAGGAGTTAGAA TACAGGAGTCAGAGTT CTG AATTCTGACTCCTGAA TTCCGTATTCTGTCC Daud_0876 936601 - 937446 + | dihydropteroate synthase, DHPS TERM 1024 937452 - 937422 - f 100 -15.6 -3.25896 | opp_overlap 937420 937416 937415 937414, overlap 937420 TCAGGAGTTAGAATA CAGGAGTCAGAGTT CTG AATTCTGACTCCTG AATTCCGTATTCTGT TERM 1025 937800 - 937837 + G 70 -12.7 -2.87931 | gap 1 TCCCCCCGGGGTGTG GCGGCGGAGGCGT-GCAA GGG TTGCGGCGACTGCGCCGC TGTGTGCCCGGTAGA TERM 1026 938338 - 938352 + G 82 -3.4 -5.24129 | AGCAGGCCGAGGGTC CCCTGG ATA CCGTGG TTTTTTATCAGGAAA TERM 1027 939356 - 939335 - g 100 -10.1 -4.82901 | overlap 939338 CCTGGTGGATAAAAA GGAGGCACC CGGC GGTGCCTAC CGTGGGGTGGCCGAA Daud_0877 937488 - 940475 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_0878 940472 - 940909 + | methyl-viologen-reducing hydrogenase, delta subunit TERM 1028 941534 - 941498 - g 75 -14.4 -2.78384 | gap 1 GGGTGCTGGACGAGA TCGGCCCGC-CGCCCGA CTGG TCGGACGCGCAGGCCGG CCCGCGGCGTTCCGG Daud_0879 940906 - 941571 + | zinc-finger protein TERM 1029 942100 - 942059 - g 73 -8.5 -4.07568 | gap 1, overlap 942060 GGGCGCGGTGGAAAA CCCCTGCGCCG-AGCCGCTG GAG CTGCGGGTGCGGCGCCTGGA GAAGAAAATCCGGGC TERM 1030 942485 - 942450 - g 72 -11.7 -3.34517 | overlap 942448 942453 ATCGTGCCCGAAATA GTACGCCGGGCGGGG CTGTAT CCTCGCCCCGCGGAC GACGAGCCTAAGGAT Daud_0880 941568 - 942512 + | methylenetetrahydrofolate reductase Daud_0881 943621 - 942545 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 1031 942600 - 942618 + g 75 -11.6 -3.53811 | TCGCGCACCTTGTCC CGGGCGGC GTC GCCGACCG TTTCCCGGAAATGCG TERM 1032 943690 - 943718 + H 72 -11.6 -3.07487 | opp_overlap 943691, overlap 943709 GCCGAAGGGCATTAT ACCGTTGGGCGG GCATG CCGCCCGGCGGG CTTTTGGGCCTATCG TERM 1033 943709 - 943719 + H 77 -8.2 -4.13014 | opp_overlap 943691, overlap 943690 TTGGGCGGGCATGCC GCCC GGC GGGC TTTTGGGCCTATCGG TERM 1034 943841 - 943825 - g 72 -4.3 -4.57073 | GACCCGGGTGAAAAA GGCTGTC GGG GACTACC GGATGATTGAGCCCG Daud_0882 943748 - 944671 + | PP-loop domain-containing protein TERM 1035 944715 - 944660 - f 100 -18.8 -3.28712 | gap 1, overlap 944664 GGTGGGTCTGCAGAA GGAACCTCGTGACGGCCGCCCCCGGCC CGC GGCAGGGGGCACCCG-CTCGGGGTACC CGCGCTAGCGGGTCG TERM 1036 944711 - 944664 - f 100 -16.8 -3.44146 | gap 1, overlap 944660 GGTCTGCAGAAGGAA CCTCGTGACGGCCGCCCCCGGCC CGC GGCAGGGGGCACCCG-CTCGGGG TACCCGCGCTAGCGG Daud_0883 944668 - 945369 + | hypothetical protein Daud_0884 945375 - 946313 + | O-methyltransferase family protein TERM 1037 946909 - 946931 + G 76 -12.6 -3.42256 | overlap 946908 ATTGGGCAGGGGGCG CCGCGGGCGG AAA TCGCCCGGGG TCTTCTTGAATCGGT Daud_0885 946369 - 947148 + | putative CoA-substrate-specific enzyme activase Daud_0886 947617 - 947138 - | hypothetical protein TERM 1038 947459 - 947431 - G 74 -5.9 -4.44548 | overlap 947432 CATAGTCAACGAAAA CGGTCAGCGCC ACGGCCA GGCCCTGACCC GCGAAAAAGACCCAG Daud_0887 947731 - 948012 + | hypothetical protein TERM 1039 948170 - 948214 + F 75 -6.2 -4.56597 | gap 1, opp_overlap 948169 948182 948213 GCTGGTTATAAAATC GCTGCGGGAAGACCCGCCCCC TTCA GGGGGCGGGA-TGAAAGCAGC TTTTTGCCGGGAACG TERM 1040 948203 - 948182 - f 100 -18.7 -3.01791 | opp_overlap 948170, overlap 948169 ATCGCTGCGGGAAGA CCCGCCCCC TTCA GGGGGCGGG ATGAAAGCAGCTTTT TERM 1041 948215 - 948247 + F 100 -15.1 -4.39287 | opp_overlap 948213 CGGGATGAAAGCAGC TTTTTGCCGGGAA CGCTTGT TTCCCGGCAAAAA TTTTGGTATACTTAG Daud_0888 948269 - 948664 + | transposase IS200-family protein Daud_0889 948677 - 949999 + | transposase, IS605 OrfB TERM 1042 949980 - 950015 + F 72 -11.8 -2.71483 | opp_overlap 949979 GGTTTGTAAAAGTAT CTCCAAGGGCATCGGC GTGA GCCGGTGTACCTGGAG TAGTTGCGACGGTGT Daud_0890 950176 - 950364 + | hypothetical protein Daud_0891 950543 - 950821 + | hypothetical protein TERM 1043 951578 - 951558 - g 78 -3.1 -5.09426 | overlap 951559 CGCAAGCCGAAAAAA GCCGCTGCC GAA AGCCGCAAC CGGGAAAAGGAAAAG Daud_0892 950841 - 951623 + | primosome, DnaD subunit Daud_0893 951637 - 952362 + | IstB ATP binding domain-containing protein Daud_0894 952459 - 953166 + | cell wall hydrolase, SleB TERM 1044 953169 - 953182 + F 100 -5.2 -6.09133 | opp_overlap 953169 953167 CACAAAAATTTAAGA GCGC CTGCGA GCGC TTTTTTTTTGGCATA Daud_0895 953288 - 955390 + | ATP-grasp domain-containing protein Daud_0896 955402 - 956457 + | DRTGG domain-containing protein TERM 1045 956489 - 956512 + F 100 -9.6 -5.64421 | gap 1, opp_overlap 956482 GGATTAAAGCGGCAA TCCCACCCTGG AAA TC-GGGTGGGA TTTTTTGTTTAGCCT Daud_0897 956695 - 958173 + | stage IV sporulation protein A TERM 1046 958251 - 958215 - T 100 -9.5 -5.59879 | opp_overlap 958216 958218 958222, overlap 958218 958222 TACAAATACAAAAAA CAAGAAACCCTTCTCAA CTA TAGAGAAGGGTTTCTAT TATAGAGCCCGTAAT TERM 1047 958216 - 958250 + T 83 -13 -3.29144 | opp_overlap 958215 958218 958222, overlap 958218 958222 ACAAATACAAAAAAC AAGAAACCCTTCTCAA CTA TAGAGAAGGGTTTCTA TTATAGAGCCCGTAA TERM 1048 958248 - 958218 - T 100 -15.6 -4.8277 | opp_overlap 958216 958218 958222, overlap 958215 958222 AAATACAAAAAACAA GAAACCCTTCTCAA CTA TAGAGAAGGGTTTC TATTATAGAGCCCGT TERM 1049 958218 - 958248 + T 100 -15.6 -3.21395 | opp_overlap 958218 958215 958222, overlap 958216 958222 AAATACAAAAAACAA GAAACCCTTCTCAA CTA TAGAGAAGGGTTTC TATTATAGAGCCCGT TERM 1050 958222 - 958244 + T 90 -10.6 -4.27117 | opp_overlap 958218 958215 958222, overlap 958218 958216 ACAAAAAACAAGAAA CCCTTCTCAA CTA TAGAGAAGGG TTTCTATTATAGAGC TERM 1051 958244 - 958222 - T 100 -10.6 -4.86216 | opp_overlap 958222 958218 958216, overlap 958218 958215 ACAAAAAACAAGAAA CCCTTCTCAA CTA TAGAGAAGGG TTTCTATTATAGAGC Daud_0898 958485 - 958228 - | hypothetical protein TERM 1052 958509 - 958540 + H 71 -8.6 -3.76952 | CCGCCCTTACCTCCG GCCGATACCAAGCC GCTT GACCCGGTATCGGC TTTCGGTTCGATCAC Daud_0899 958800 - 959090 + | hypothetical protein TERM 1053 959213 - 959200 - g 72 -4.5 -4.56775 | gap 1, opp_overlap 959211 ATGGCGGTTGAAAAA GC-CCG AAC CGGTGC TCTCCCGGATGCTGG TERM 1054 959315 - 959346 + G 74 -10.2 -3.72695 | gap 1, overlap 959317 GCACGAATTTTTTTG GACGGGGACC-TGGA CAG TCTATGGTCCCCGTA TTTGCTGCGGGACAT TERM 1055 959317 - 959344 + G 76 -12.8 -3.44848 | gap 1, overlap 959315 ACGAATTTTTTTGGA CGGGGACC-TGGA CAG TCTATGGTCCCCG TATTTGCTGCGGGAC TERM 1056 959791 - 959812 + G 74 -5 -4.59773 | GGCCCAGGCCCTGCT CGGTGACG AATTGC CGCCGCCG TTTTTGGGGCTGGCC TERM 1057 960611 - 960574 - g 76 -9.1 -4.07568 | gap 1, opp_overlap 960585 TTGGGGCGCGCAAAA CGACCCTCCGATCCT-GG CCG CCGAGGATTTGCGGGTCG TGAAACACTACAGGG Daud_0900 959168 - 961741 + | single-stranded-DNA-specific exonuclease RecJ TERM 1058 963055 - 963040 - g 72 -2.4 -4.68994 | overlap 963029 963041 963042 ACTACCAGTTAAAAA CCGGCG ACAT CGTCGA CATCATCAAGGGCAA TERM 1059 963602 - 963588 - g 76 -5.6 -4.56597 | GTGTGGCGGGAAAAA GAGCGG GAA CGGCTC GTGGAAGTCGTCTGG Daud_0901 961731 - 963869 + | (p)ppGpp synthetase I, SpoT/RelA TERM 1060 964114 - 964143 + G 76 -5.6 -4.56597 | gap 1, overlap 964130 CCAGTTCACCCTGTT CGGGGACTGTCGC AAGGG GCGGCGG-CCCGG TTTTTCGGCGGCCGC TERM 1061 964147 - 964180 + G 72 -11.7 -3.2964 | gap 1 GCGGCGGCCCGGTTT TTCGGCGGC-CGCGCC GCC GGAGCGCGCCGTTGAA TTGTACGCCGAGTTT Daud_0902 963869 - 964318 + | D-tyrosyl-tRNA(Tyr) deacylase Daud_0903 964336 - 964977 + | beta-lactamase domain-containing protein TERM 1062 965041 - 965025 - g 76 -11.5 -3.81414 | overlap 965026 ATGTTTAACGAAGAA CCGCCGG AGG CCGGCGA CAGGCGTTACACCAT TERM 1063 965040 - 965026 - g 70 -12.8 -2.88366 | overlap 965025 TGTTTAACGAAGAAC CGCCGG AGG CCGGCG ACAGGCGTTACACCA TERM 1064 965153 - 965169 + G 75 -3.6 -4.83615 | overlap 965155 GTGCCTGGAAAACCT GCGCGA GGCCA TCGCCC TTTTTCTGGACGATG Daud_0904 965010 - 965414 + | hypothetical protein TERM 1065 966088 - 966078 - g 72 -2.4 -4.72272 | CCGCCTTAGGAAAAA CCCG CTG CGGC TCCTGGACTGCAAGG TERM 1066 966399 - 966409 + G 71 -4.6 -4.46212 | overlap 966372 CGCCTTGGGGCTCGA GCGG ACG CTGC TTTTGTGGTCCAGGC Daud_0905 965476 - 966738 + | histidyl-tRNA synthetase TERM 1067 968433 - 968416 - g 76 -6.3 -4.41348 | gap 1 CCGCCGGCAAACAAA CCATC-CG TGA CGTGATGG CCTTCCCCAAGACCC Daud_0906 966756 - 968561 + | aspartyl-tRNA synthetase TERM 1068 968915 - 968934 + F 76 -10 -3.80115 | opp_overlap 968914, overlap 968906 TGCGATCGGTAATAG CCGTGTTC GTCC GGACACGG TTCTCTGTTATTTGA TERM 1069 969695 - 969665 - g 79 -8.1 -4.2528 | opp_overlap 969633, overlap 969683 CCGGAACGGAACAAA CTGGCGGCCGCTG AATTA CGGCGGGGGCCAG GAGTGGGGGCGCCGG Daud_0907 969009 - 970160 + | aminotransferase, class V Daud_0908 970298 - 970471 + | hypothetical protein Daud_0909 971226 - 970495 - | hypothetical protein TERM 1070 970598 - 970614 + g 83 -5 -5.01732 | opp_overlap 970593, overlap 970596 970596 970610 GCGAATTCAACCGCC CCGGCC AGGTC GGCGGG TTTTTTCACCCGGTT TERM 1071 970948 - 970900 - G 71 -8.9 -3.86346 | gap 3, overlap 970901 GTACCGGGCGAGAAA CCGGCCGACATGGTCGGCGATGGC ACCG GCCACCGCGG-CCATG--GGCCCG ACTCCGGCCAGCGCC Daud_0910 971636 - 971229 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_0911 972853 - 971636 - | hypothetical protein TERM 1072 972392 - 972370 - G 70 -7.7 -4.07885 | overlap 972373 TACGCGGGTTGAAAA GCACGACCT CGTTC AGGTCGTCC AGGGTGATCCAGGTC TERM 1073 972913 - 972890 - H 100 -11.8 -4.78149 | opp_overlap 972910, overlap 972883 972910 CGGAGAATCGAAAAA CCTCTTCTCC GCAG GGAAAAGAGG CCGAAAACGATACGG TERM 1074 973156 - 973168 + H 100 -7.7 -5.71712 | opp_overlap 973156 CCGGCCCCACAAAAA GGTGT CAG ACACC TTTTTTTGTGTAAAG TERM 1075 973168 - 973156 - H 86 -7.7 -4.82901 | opp_overlap 973156 CCGGCCCCACAAAAA GGTGT CAG ACACC TTTTTTTGTGTAAAG TERM 1076 973241 - 973255 + H 74 -7.8 -4.16016 | GGATGGGCGTTTCGC CACCGG CGC TCGGTG TTTCTTGCGCGGTGC TERM 1077 973262 - 973274 + H 95 -10.5 -4.65078 | CGCTCGGTGTTTCTT GCGCG GTG CGCGC TTTTCTTGACCATAT TERM 1078 975594 - 975577 - g 82 -11.3 -3.965 | opp_overlap 975577 975576 CGCGAAAACGAACAA CTGCAGG ACCG CCTGCAG GTTTATGAGGTCAAA TERM 1079 975876 - 975835 - g 73 -3.3 -4.77165 | GGGGCGATAATAAAA GAGGCGGCGGCGGTGGCCG GAGG CGGCGGCGGTGGCCGACCC GAAATGGCCCAGGCC Daud_0912 973336 - 975978 + | alanyl-tRNA synthetase Daud_0913 976073 - 976351 + | hypothetical protein TERM 1080 976335 - 976354 + F 73 -9.3 -3.82484 | opp_overlap 976335 ACCTGGCGCACAAAA GCCCTAC CGGGGA GTAGGGC TTTCACTTGTGCTGT TERM 1081 976354 - 976335 - f 86 -10 -4.37092 | opp_overlap 976335 ACCTGGCGCACAAAA GCCCTACC GGGG AGTAGGGC TTTCACTTGTGCTGT TERM 1082 976664 - 976652 - g 71 -4.7 -4.45485 | ACCAGATGGAGAAAA GCCTG ATT CGGGC CCTACGGTCTCTGAA TERM 1083 977125 - 977166 + G 88 -14.3 -3.71848 | gap 1, overlap 977110 977155 TCCGGCCAGGTGGTC CCGG-ACGGCTTGCGCCAGA TTG TCAGGCGCCGGCCGCGCCGG TTGTTGGTGGAGCAC Daud_0914 976384 - 977334 + | aldo/keto reductase Daud_0915 977337 - 977762 + | Holliday junction resolvase YqgF Daud_0916 977819 - 978082 + | hypothetical protein TERM 1084 978408 - 978420 + G 100 -9.1 -5.71712 | opp_overlap 978394 978408 978407 GCGAAGCGCTCAAAG CCGGA CGC TCCGG TTTTTTTGTGTCCCA Daud_0917 978095 - 979570 + | VanW family protein Daud_0918 979709 - 980746 + | aminodeoxychorismate lyase TERM 1085 981249 - 981265 + G 73 -2.9 -4.74103 | CGTGCCCCGCGGCGC GATCCTG GAC CGGAATC TTTTTGACTTGACGG TERM 1086 981655 - 981669 + G 78 -3.4 -5.00616 | GGCCGGCAGCCGGTG GCGGTG GTG CGCAGC TTTTTTGACGCCCGC Daud_0919 981073 - 982734 + | peptidoglycan glycosyltransferase Daud_0920 982931 - 983128 + | FmdB family regulatory protein TERM 1087 983164 - 983142 - f 80 -10.6 -3.91032 | GAAGGATCTGACAAA TTGGGGAACA GGC TGTTCCCCTA GAATAATAAAATAAT TERM 1088 983236 - 983225 - g 88 -4.4 -5.33921 | overlap 983227 AAATCAATGAAAAAA CGTT CGAG AACG AAGTGACCAGGAGCG Daud_0921 983200 - 983523 + | thioredoxin TERM 1089 983648 - 983681 + F 84 -13.2 -3.14132 | opp_overlap 983657, overlap 983636 CCTCCCGCACCATTT TTCGAAGGAGTGGG TTCCGT CCCACTCCTTCGCG TTAGTAAAGCGCCGG Daud_0922 983717 - 984181 + | hypothetical protein Daud_0923 984211 - 985290 + | NusA antitermination factor TERM 1090 985318 - 985332 + F 83 -7.8 -4.65895 | GTTGCTTGTAGTTTA CTTCCC CGG GGGAGG TTTTTAAATGCCCGC Daud_0924 985340 - 985618 + | hypothetical protein Daud_0925 985602 - 985919 + | ribosomal protein L7Ae/L30e/S12e/Gadd45 TERM 1091 986145 - 986120 - g 74 -9.7 -3.90729 | gap 1 AAGAAGGGGGATAAA TCCAGAGTCGGC CCG GCCG-CCCCGGA GGAGCGGGGTGGTCC TERM 1092 986401 - 986346 - g 100 -25.4 -3.56594 | overlap 986337 986336 986348 CGAAACCGCCGGAAA TACCGGTTGAGGCGCGTCCGGCGCCG CCAC CGGCGGCACCCGCGCCTCAACCGGAA CAGCACCGGCCGACG TERM 1093 986399 - 986348 - g 100 -28 -3.3579 | overlap 986337 986336 986346 AAACCGCCGGAAATA CCGGTTGAGGCGCGTCCGGCGCCG CCAC CGGCGGCACCCGCGCCTCAACCGG AACAGCACCGGCCGA TERM 1094 986435 - 986404 - g 93 -20.2 -3.09492 | gap 1 GCCTCAACCGGAACA GCACCGGCCGACGCC GCC GACG-CGGCCGGTGC CGGACCGGCGTCCGC TERM 1095 986888 - 986875 - g 74 -5.9 -4.41047 | ACGCCCGAAGGAAAA GCAGC ATGG GCCGC GTGTGGTTCCTCCAT TERM 1096 987873 - 987856 - g 74 -4.8 -4.57073 | gap 1, opp_overlap 987861 987864, overlap 987857 CAGGCGGGTGAAAAA GGCG-GG CCCGT CCGCGCC GGTGGAGGTGTTGGG TERM 1097 988490 - 988464 - g 76 -7.3 -4.27316 | gap 1, overlap 988467 TGCTGGAAGGGAAAA TCACGCGGGACG CGGG CGTGC-GCGTGA TCCACGACGGTAAAG Daud_0926 986003 - 988669 + | translation initiation factor IF-2 Daud_0927 988689 - 989048 + | ribosome-binding factor A TERM 1098 989911 - 989955 + G 73 -11.3 -3.57462 | gap 1 GTGGCCGCGTTGGCT TCGGCCTTCGGCGGAGGCGG ACATCC CCGCG-CCGCCGGCTGCCGA TTTGAGGGTGAACTG Daud_0928 989050 - 990045 + | phosphoesterase domain-containing protein Daud_0929 990029 - 990946 + | tRNA pseudouridine synthase B TERM 1099 991130 - 991105 - g 75 -11.8 -3.58533 | opp_overlap 991097, overlap 991106 GGAGAATGGTGGAAA GGGCACGCCG TTTGGG CGGCGTGCCG GGCATTTTCACCTTT TERM 1100 991129 - 991106 - g 78 -15.3 -2.74799 | opp_overlap 991097, overlap 991105 GAGAATGGTGGAAAG GGCACGCCG TTTGGG CGGCGTGCC GGGCATTTTCACCTT TERM 1101 991228 - 991244 + G 70 -12.3 -3.21416 | opp_overlap 991223 AGGAAGAAATCATCG CCGGACT GGG AGTCCGG TTGCTGCTCCGAATC TERM 1102 991733 - 991764 + G 72 -4.4 -4.66833 | gap 1, opp_overlap 991708 CCCCACTTTCACCGG GGCGGA-CTCCGG CCGGAAT CTGGAGGTCCACC TTTTTGACGTTGCCG Daud_0930 990984 - 991910 + | riboflavin biosynthesis protein RibF Daud_0931 992003 - 992215 + | hypothetical protein Daud_0932 992233 - 992454 + | hypothetical protein Daud_0933 992542 - 992811 + | ribosomal protein S15 TERM 1103 992808 - 992828 + F 70 -9 -3.73106 | opp_overlap 992811, overlap 992800 ACTCGGACTGCGGAA GTAGGGGA AGGCA TCCCCTGC TTCTTACCGTTTTGG TERM 1104 993171 - 993199 + G 75 -14 -3.01791 | gap 1 GGCCATTCTCGCCGC GCGG-CTGATCGA CCGG TCGATCAGGCCGC TCTTCCCGCGCAACT TERM 1105 993882 - 993861 - g 71 -5 -4.4078 | overlap 993865 GGTGCTGAAGGAAAA GGTACGGC TGGACG GCCGCGCC TTCGACGAAATCAGG TERM 1106 993924 - 993946 + G 76 -9 -4.07568 | GGAGGTCAACGTGCT GCCGCGCACC CAC GGTTCGGGGC TTTTCCAGCGCGGGC TERM 1107 994354 - 994332 - g 76 -13.4 -3.14344 | GATGGGTCTGATCAA GGAGGGCGAC GAG GTCGCCGTCC TGACCGATATCCAGG TERM 1108 995092 - 995103 + G 70 -7.2 -4.08216 | opp_overlap 995073 995070 CGCCCGGACCGGCGG CCGC GCTC GCGG TTTTCCCGGAGATAA Daud_0934 992893 - 995118 + | 3' exoribonuclease TERM 1109 995198 - 995221 + F 100 -6.6 -5.78622 | opp_overlap 995203, overlap 995203 ACGCAGATGTTTGCA CCACAGGCCC TAAG GGGCCTTTTG TTTTTTTTCGGGTCA TERM 1110 995203 - 995216 + F 100 -9.5 -5.66926 | opp_overlap 995203, overlap 995198 GATGTTTGCACCACA GGCCC TAAG GGGCC TTTTGTTTTTTTTCG TERM 1111 996017 - 996007 - g 71 -8.2 -3.85698 | overlap 995984 995983 GCCCTCGGCGAGAAA CCCG GAG CGGG CAACAGTTCGTTAGA Daud_0935 995286 - 996131 + | polysaccharide deacetylase TERM 1112 996236 - 996265 + G 76 -13.5 -3.14344 | GCCGGGTCGCGCGAC GAGGCGGACTCCG TGTC CGGGGTCTGCCAC TTCATCGAGCACATG Daud_0936 996128 - 997390 + | peptidase M16 domain-containing protein Daud_0937 997398 - 997865 + | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Daud_0938 997936 - 998298 + | hypothetical protein Daud_0939 998299 - 998577 + | hypothetical protein TERM 1113 998591 - 998603 + F 91 -7.7 -5.00616 | opp_overlap 998591 AGCCCGCCGGCAAAA GGTGT CAG ACACC TTTTTTGCCGGGGCA TERM 1114 998603 - 998591 - f 74 -7.7 -4.07687 | opp_overlap 998591 AGCCCGCCGGCAAAA GGTGT CAG ACACC TTTTTTGCCGGGGCA TERM 1115 998656 - 998687 + F 83 -7.3 -4.58395 | overlap 998657 TTAATTAATTTCACC TGAACTCCCGC CACCGTTTCC GCGGGAGTTCC TTTTTGCGGCGTAAA TERM 1116 998657 - 998686 + F 73 -10.8 -3.34716 | overlap 998656 TAATTAATTTCACCT GAACTCCCGC CACCGTTTCC GCGGGAGTTC CTTTTTGCGGCGTAA TERM 1117 998814 - 998824 + F 71 -4.6 -4.59853 | overlap 998794 GGCAGTCTTACTGTT CGCG GTG CGTG TTTTTGGGGGGTTCG TERM 1118 998982 - 999020 + G 74 -2.3 -4.82901 | gap 1, overlap 998984 998985 CCGGTGTTTCACCGT CACCTCCGGCTGCT-GCC CGCC GGCGAGCGGCTGGACCTC TTTTTGTACAGCCGC Daud_0940 998844 - 999836 + | hypothetical protein TERM 1119 999854 - 999868 + G 74 -9.2 -3.89524 | opp_overlap 999846 999844, overlap 999844 TGAAAGAGGATGTCC CGCGGG ACG TCCGCG TTTATCGGGTGCGCT Daud_0941 999838 - 1000011 + | hypothetical protein TERM 1120 1000572 - 1000598 + G 79 -8.7 -4.30844 | overlap 1000573 GTGTAGGCGGGTTCG TGGCCCCCA ATTTCGCGG TGGGGGCCG TTTTGATGATGAAGT Daud_0942 1000244 - 1001008 + | dihydrodipicolinate reductase TERM 1121 1001368 - 1001385 + G 81 -9.9 -4.1585 | AGATGCTTGAGACCG TCGGTAC GGAC GTACCGA TTTTCACGGTTGTGG Daud_0943 1001091 - 1002023 + | NAD(P) transhydrogenase subunit alpha Daud_0944 1002004 - 1002591 + | flavoprotein TERM 1122 1003159 - 1003169 + G 76 -8.2 -4.13767 | opp_overlap 1003156 1003159 GGATGGACAAACTTA CCCG CCC CGGG TTTTCGCATACCAGA TERM 1123 1003337 - 1003368 + G 71 -5 -4.43844 | opp_overlap 1003354, overlap 1003339 CCTGTATTCCGCAGC CACTCGGAGTCGAT CAAC GTCGAGACCGAGCG TTTTGTAAGTGCTCA Daud_0945 1002617 - 1003627 + | aspartate-semialdehyde dehydrogenase TERM 1124 1004527 - 1004499 - g 85 -5.9 -5.02323 | opp_overlap 1004499 GCAGGAGAAAGAAAA GCTGCGCGTCC TGCTCAG GGAGGCTCAGC TGCTGTAGCACCGTG Daud_0946 1003651 - 1004535 + | dihydrodipicolinate synthase Daud_0947 1004581 - 1006245 + | beta-lactamase domain-containing protein TERM 1125 1006300 - 1006277 - f 81 -6.6 -4.77165 | opp_overlap 1006277 1006275 1006269 TGTGGGATAATAAAA CCCGCCGG GCGTGTTG CGGGCGGG TCTTGATATTTCTTT TERM 1126 1006545 - 1006517 - f 72 -11.9 -2.77233 | opp_overlap 1006525, overlap 1006525 CGACAATTTGGAAAG TAAAAAAAGGGGT CTG ACCCCTTTTTATA AGGGGGACGGCAGTG TERM 1127 1006537 - 1006525 - f 100 -9.1 -5.72207 | opp_overlap 1006525, overlap 1006517 TGGAAAGTAAAAAAA GGGGT CTG ACCCC TTTTTATAAGGGGGA TERM 1128 1006525 - 1006537 + F 93 -9.1 -4.82901 | opp_overlap 1006517 1006525 TGGAAAGTAAAAAAA GGGGT CTG ACCCC TTTTTATAAGGGGGA TERM 1129 1006815 - 1006864 + G 75 -13.5 -3.05384 | gap 1, overlap 1006807 1006817 1006842 GGCTGGATACGGCCT GCCGGTCGGAC-TGTTGTTCGGCG GAG CGCTGGGCAACCTGGCCGACCGCC TTCGGTACGGCCGGG Daud_0948 1006558 - 1007019 + | lipoprotein signal peptidase TERM 1130 1007530 - 1007495 - g 75 -11.8 -3.59979 | gap 1, overlap 1007498 GCCGGCCAGCTCAAA GACC-GCGCGGTGCTCC GGC GGTACACCGCCCTGGTC CACGGCCGGCCCCGG Daud_0949 1007006 - 1007935 + | RluA family pseudouridine synthase Daud_0950 1009578 - 1008250 - | integrase catalytic subunit TERM 1131 1009604 - 1009584 - H 71 -4.6 -4.63218 | opp_overlap 1009584 1009585, overlap 1009585 TGGGTTTCAAGAAAA CGTCTCCC TTCAT GGGTGACA TTTTCTCAGACCGCT TERM 1132 1009671 - 1009648 - H 76 -11.8 -3.08438 | overlap 1009635 1009652 TATCACAGGCCAACA GCAAGGTGCT GGGG AACACCTTGC CATATGCCGTAACGC Daud_0951 1009815 - 1010933 + | twitching motility protein TERM 1133 1012018 - 1012002 - g 75 -12.3 -3.61398 | opp_overlap 1012001 1012002 GCTGTCGGCGAAGAA TCCGGCA CCC TGCCGGA CTTGTTGGGCCGCAT Daud_0952 1010982 - 1012190 + | type II secretion system protein TERM 1134 1012663 - 1012689 + G 73 -3.5 -4.72986 | GAACTGCTGCTCGTG GCCGCGCGGCG GGAAA TGCTGGACGGC TTTTTGCTGGCGCTG TERM 1135 1012854 - 1012866 + G 74 -6.2 -4.46112 | CGCACGGGGCATGCT GCGG TTGGC CCGC TTTGTTTCGGTCAGC Daud_0953 1012231 - 1013268 + | type IV pilus assembly protein PilM TERM 1136 1013354 - 1013369 + G 83 -5.4 -5.07486 | TTATCTCCTGGCCGT CAGCGT GGTA ATGCTG TTTTTCTTGGGAGTC Daud_0954 1013265 - 1013867 + | fimbrial assembly family protein TERM 1137 1014265 - 1014280 + G 78 -4.6 -4.68424 | overlap 1014258 1014257 CTTTGAGGGCAGCTA CCGGAG TACG CTGCGG TTTTTGGATGAATTG Daud_0955 1013864 - 1014442 + | hypothetical protein TERM 1138 1016094 - 1016045 - g 82 -14.9 -3.25823 | gap 1, overlap 1016048 GGCCCGGGAGATCAA GGAGGCCGCCGTGGCCGA-GGGGA TGG TCACCTTCCGCCGCGACGGCCTGC TGCGGGTGAAGCAGG TERM 1139 1016091 - 1016048 - g 78 -15.2 -2.81547 | gap 1, overlap 1016045 CCGGGAGATCAAGGA GGCCGCCGTGGCCGA-GGGGA TGG TCACCTTCCGCCGCGACGGCC TGCTGCGGGTGAAGC Daud_0956 1014465 - 1016150 + | type II secretion system protein E Daud_0957 1016296 - 1016709 + | Tfp pilus assembly protein PilE TERM 1140 1016751 - 1016779 + T 100 -10.9 -5.24129 | opp_overlap 1016752, overlap 1016753 TTATGGATTGGTAAG AGCCTCCTGCCAC AAT GCGGCAGGAGGTG TTTTTTGTGGGCCGG TERM 1141 1016778 - 1016752 - T 91 -14.4 -3.04461 | opp_overlap 1016751 1016753 TATGGATTGGTAAGA GCCTCCTGCCAC AAT GCGGCAGGAGGT GTTTTTTGTGGGCCG TERM 1142 1016753 - 1016777 + T 100 -15.7 -4.25873 | opp_overlap 1016752, overlap 1016751 ATGGATTGGTAAGAG CCTCCTGCCAC AAT GCGGCAGGAGG TGTTTTTTGTGGGCC Daud_0958 1018660 - 1016924 - | transposase Daud_0960 1018982 - 1019251 + | hypothetical protein Daud_0961 1020997 - 1019345 - | hypothetical protein TERM 1143 1020602 - 1020587 - G 73 -3.2 -4.78149 | overlap 1020588 GCGATAAGCCAAAAA CTCCCC GTCC AGGGAA AAACCAAGATCCTCC Daud_0962 1021401 - 1021045 - | hypothetical protein Daud_0963 1021801 - 1021403 - | hypothetical protein TERM 1144 1021655 - 1021672 + g 84 -4.1 -5.19328 | overlap 1021616 TCCGGATCTGGCCAG GTAGTGC GCCT GCATTGC TTTTTCTTGTACGAT Daud_0964 1022139 - 1021876 - | hypothetical protein Daud_0965 1023405 - 1022158 - | hypothetical protein TERM 1145 1022734 - 1022718 - G 79 -9.4 -4.18018 | CCGCCTGACCCAAAA GGTCCG CCAGC CGGACC GGTGACACCTGCGTA Daud_0966 1023965 - 1023420 - | hypothetical protein TERM 1146 1024449 - 1024468 + G 74 -4.9 -4.63952 | TCGTGGCATTACCCG CTGGTGG AGTGCG CCGCCGG TTTGTTGTTTGTCCT TERM 1147 1024645 - 1024676 + G 86 -8.6 -4.56597 | gap 1, overlap 1024604 1024663 TGGTGGCGCTTCAGT CGTGGGC-CGCCCTG CTC TGGGGCGCGGCCGCG TTTTTGGGGGCGGGC Daud_0967 1024209 - 1024973 + | peptidase A24A domain-containing protein Daud_0968 1025042 - 1026727 + | type II secretion system protein E TERM 1148 1027617 - 1027576 - g 78 -14.5 -3.04322 | gap 1 TTCAACTGGCCAACA CGATCCAGGGAGTG-GTCGC GCA GCAACTCATCCCCCGGATCG ACAAGCCGGGACGGG Daud_0969 1026759 - 1027856 + | twitching motility protein TERM 1149 1028134 - 1028151 + G 73 -12.7 -3.21276 | overlap 1028132 CCGCGCCGAAGGTGA CGGCCAG GGAC CTGGCCG TATTCTGCCGCCAGC Daud_0970 1027908 - 1029161 + | type II secretion system protein Daud_0971 1029257 - 1029778 + | general secretion pathway protein H Daud_0972 1029805 - 1030248 + | hypothetical protein Daud_0973 1030245 - 1030715 + | hypothetical protein Daud_0974 1030732 - 1031961 + | hypothetical protein Daud_0975 1031983 - 1033107 + | type IV pilus assembly protein PilM TERM 1150 1033563 - 1033538 - g 73 -12.5 -3.23447 | gap 1, opp_overlap 1033536 1033536, overlap 1033536 1033540 TGAAGGCGGACAAGA CAGCGGC-CGGC AAG GCCGAGCCGCAG GGCTTGGTACTACCC TERM 1151 1033561 - 1033540 - g 76 -13.7 -3.1789 | gap 1, opp_overlap 1033536 1033536, overlap 1033538 1033536 AAGGCGGACAAGACA GCGGC-CGGC AAG GCCGAGCCGC AGGGCTTGGTACTAC Daud_0976 1033114 - 1033779 + | fimbrial assembly family protein TERM 1152 1034586 - 1034566 - g 70 -12.5 -2.85351 | opp_overlap 1034549 TCCGCCGACAGTAGA GCCCGCACC GGA GGTGCGGGA GGTACCGGCGGGGCA Daud_0977 1033760 - 1034668 + | hypothetical protein Daud_0978 1034691 - 1035116 + | copper amine oxidase domain-containing protein Daud_0979 1035167 - 1036291 + | metal dependent phosphohydrolase Daud_0980 1036656 - 1036318 - | hypothetical protein Daud_0981 1038202 - 1036784 - | hypothetical protein TERM 1153 1036934 - 1036946 + g 74 -4.8 -4.67353 | CAGTTGGATTGCCTC GGCT CCGAC AGCC TTTTTCAGTAGGTCG TERM 1154 1038227 - 1038249 + r 100 -13.4 -4.1721 | overlap 1038228 CTCCTTTGGCGGGGA GGGCTTCCCC TCA GGGGAAGCCG TTTTGAGGTCTCACT TERM 1155 1038228 - 1038248 + r 100 -16.9 -3.09844 | overlap 1038227 TCCTTTGGCGGGGAG GGCTTCCCC TCA GGGGAAGCC GTTTTGAGGTCTCAC Daud_0982 1039150 - 1038380 - | FliA/WhiG family RNA polymerase sigma factor Daud_0983 1039634 - 1039233 - | PilT domain-containing protein Daud_0984 1039867 - 1039622 - | CopG family transcriptional regulator TERM 1156 1040724 - 1040765 + G 87 -5.7 -5.12617 | gap 1, opp_overlap 1040742, overlap 1040726 1040735 CGCTGGCCCAACCCG GCGGTTCCCGGCCGGA-AAC CGG GTTCTCCGGGCGGCCGCCTC TTTTTTGCGTGGTTG Daud_0985 1040132 - 1041256 + | molybdopterin-guanine dinucleotide biosynthesis protein B Daud_0986 1041260 - 1041793 + | HAD family phosphatase TERM 1157 1041875 - 1041857 - g 74 -13.1 -3.35679 | opp_overlap 1041848 1041865 CCCCGCGATGCAGAA CGCCGCC TTTCG GGCGGCG GGCCTGAATCTGGTG TERM 1158 1042639 - 1042623 - g 74 -10.1 -3.72576 | CTCGCGGCGATGAAA CAGGCCC TGG AGGCCTG CCTGGCATAATTGTT Daud_0987 1041780 - 1042649 + | shikimate 5-dehydrogenase TERM 1159 1042990 - 1043020 + G 79 -9.5 -4.13767 | CGGGTGGTGACCCGG CCCCGGCCCGGGC ACGCC GACCTGGCGGGGG TTTTGAAGTACGGGC Daud_0988 1042678 - 1043850 + | chorismate synthase TERM 1160 1043879 - 1043867 - f 100 -10.5 -5.00616 | opp_overlap 1043867 CGTCCCCCGAAAAAA GGGGC CTG GCCCC TTTTTTGGGCGCGGC TERM 1161 1043867 - 1043879 + F 100 -10.5 -5.00616 | opp_overlap 1043867 CGTCCCCCGAAAAAA GGGGC CTG GCCCC TTTTTTGGGCGCGGC Daud_0989 1043921 - 1044490 + | shikimate kinase TERM 1162 1044757 - 1044772 + GF 77 -8.2 -4.07568 | overlap 1044758 TGGGAGGCGGCGTGG TCGGCG ACGT CGCCGG TTTTACGGCCGCGAC Daud_0990 1044441 - 1045511 + | 3-dehydroquinate synthase TERM 1163 1045661 - 1045647 - g 74 -2.7 -4.86385 | ATCTTCAAAAACAAA CCGGG GAGCG CCTGG GCCGGGTGCTGGTGG TERM 1164 1046746 - 1046777 + G 85 -2.8 -5.26316 | gap 1, opp_overlap 1046736, overlap 1046749 GGAAACGGCGGAGAT CGCGGTGCGC-GCGG CTA CCACTGGGCACCTTG TTTTTTCTACCCTGC TERM 1165 1046749 - 1046774 + G 78 -5.3 -4.72201 | gap 1, opp_overlap 1046736, overlap 1046746 AACGGCGGAGATCGC GGTGCGC-GCGG CTA CCACTGGGCACC TTGTTTTTTCTACCC Daud_0991 1045544 - 1047238 + | type II secretion system protein E TERM 1166 1047406 - 1047422 + G 71 -5.1 -4.50583 | opp_overlap 1047418, overlap 1047408 1047418 AAGGTGCTCTGTTAT TTCCTCT TAA AGGGGGA TTTTCTCCTGGTATT TERM 1167 1047913 - 1047900 - g 73 -6.7 -4.30576 | opp_overlap 1047912, overlap 1047906 CGTGCACTACGAAAA GGAAC ACCT GTTCC GGGAGAAGATGCGCT Daud_0992 1047340 - 1048641 + | type II secretion system protein TERM 1168 1048943 - 1048968 + G 75 -11.7 -3.61398 | overlap 1048944 ACTCCACTACGCGGA GGCGGGCCGCC TGCC GGCGGCCAGCG TTCTTGACCAAGCCG TERM 1169 1048944 - 1048967 + G 78 -15.2 -2.76696 | overlap 1048943 CTCCACTACGCGGAG GCGGGCCGCC TGCC GGCGGCCAGC GTTCTTGACCAAGCC Daud_0993 1048668 - 1049222 + | hypothetical protein Daud_0994 1049231 - 1049710 + | N-terminal methylation protein Daud_0995 1049691 - 1050062 + | hypothetical protein TERM 1170 1050083 - 1050097 + G 76 -5.6 -4.64766 | overlap 1050062 1050060 CGGGCGGGCCGACCG CCGGCT GGA AGGCGG TTTTTGGCCTGTGAG TERM 1171 1050343 - 1050356 + G 72 -4.5 -4.63527 | gap 1, overlap 1050312 1050343 GATTCAACCCGGAGT GG-CGG CGA CCGACC TTTTTGAGCTGGTGG Daud_0996 1050059 - 1050652 + | hypothetical protein Daud_0997 1050673 - 1051872 + | hypothetical protein Daud_0998 1051910 - 1052995 + | type IV pilus assembly protein PilM Daud_0999 1052995 - 1053585 + | fimbrial assembly family protein Daud_1000 1053566 - 1054267 + | hypothetical protein Daud_1001 1054541 - 1056034 + | peptidase U62, modulator of DNA gyrase TERM 1172 1056170 - 1056188 + F 100 -10.3 -4.84359 | opp_overlap 1056173 TCAAAATTGGACACT GAACGGG GTGAG CCCGTTC TTTTTATGCGGATCA Daud_1002 1056331 - 1057674 + | peptidase U62, modulator of DNA gyrase Daud_1003 1057707 - 1058159 + | 3-dehydroquinate dehydratase, type II Daud_1004 1058152 - 1059225 + | peptidase M24 Daud_1005 1059252 - 1059809 + | translation elongation factor P Daud_1006 1059903 - 1060325 + | hypothetical protein TERM 1173 1060357 - 1060383 + F 100 -19.5 -4.8048 | opp_overlap 1060357 CCGAAAGGTTCAAAA GAGCGGCGCTC TTCAC GAGCGCCGCTC TTTTTGGTCTAGAGC TERM 1174 1060383 - 1060357 - f 100 -19.5 -4.17089 | opp_overlap 1060357 CCGAAAGGTTCAAAA GAGCGGCGCTC TTCAC GAGCGCCGCTC TTTTTGGTCTAGAGC Daud_1007 1060443 - 1061441 + | AAA ATPase Daud_1008 1061429 - 1061947 + | Fis family transcriptional regulator Daud_1009 1061959 - 1062162 + | stage III sporulation AC family protein Daud_1010 1062176 - 1062562 + | putative sporulation protein Daud_1011 1062575 - 1063738 + | hypothetical protein Daud_1012 1063756 - 1064334 + | hypothetical protein TERM 1175 1064441 - 1064453 + G 81 -6.9 -4.80487 | overlap 1064439 GCTGCTGGTATTGGC CGCGC TCG GCGTG TTTCTTTTGCTTCTG TERM 1176 1064750 - 1064727 - g 75 -4.4 -4.7497 | overlap 1064701 1064729 GTGATCGATGAAAAA GACCCGGCCG GCAC CACCCGGGTG ACCACGGAGGTGAAC Daud_1013 1064361 - 1064972 + | stage III sporulation protein AG TERM 1177 1065403 - 1065381 - g 76 -5.5 -4.63218 | gap 1 GTTCTTTCAAGAAAA CCGG-GCCAC CGTG GTGGTGCCGG ATCTGACTTCCGAAG Daud_1014 1064986 - 1065516 + | hypothetical protein Daud_1015 1065671 - 1067515 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 1178 1067919 - 1067908 - g 71 -5.8 -4.25848 | AACTGGTTAGGAAAA TGGG CGTG CCCA TCGTGCCGGGCTCGG TERM 1179 1068803 - 1068818 + G 74 -5.4 -4.56597 | overlap 1068795 ACCTTTCCACCAGCG GGTGTT GTCC AACGCC TTTTTCCGGAGGGGC Daud_1016 1067535 - 1068875 + | acetyl-CoA carboxylase, biotin carboxylase Daud_1017 1068973 - 1069371 + | hypothetical protein Daud_1018 1069390 - 1069917 + | hypothetical protein Daud_1019 1069932 - 1070147 + | hypothetical protein Daud_1020 1070157 - 1070573 + | NusB antitermination factor Daud_1021 1070596 - 1071816 + | exodeoxyribonuclease VII, large subunit TERM 1180 1072034 - 1071991 - g 78 -14.6 -3.05844 | gap 1 GGCCGTAGGCGAATA CTCCCAGCGGGGCAT-CAGGC CGC GCCTGGATGCCGTGCTGGTAG GCGATGACCCGGAAG TERM 1181 1072489 - 1072523 + G 71 -5.6 -4.25104 | gap 1, opp_overlap 1072509 GTGCCACACCCGGAC GGCTGACCTGGCCGG ACACAC CCGGC-AGGCCGACC TTTTGGTGACCGCGG TERM 1182 1072739 - 1072729 - g 81 -6.8 -4.72272 | GCTGGTGATGAAAAA CCTG TTG CAGG CGATGAAGATGCAAG Daud_1022 1071917 - 1072780 + | methenyltetrahydrofolate cyclohydrolase Daud_1023 1072780 - 1073436 + | formiminotransferase-cyclodeaminase Daud_1024 1073433 - 1073660 + | exodeoxyribonuclease VII, small subunit Daud_1025 1073663 - 1074550 + | polyprenyl synthetase TERM 1183 1075460 - 1075484 + G 70 -7.7 -4.00038 | overlap 1075463 GACAACGGTCAGGCA GGTGGCGAACC TTG GGATCGCCCTC TTTCTACTGGTGATA TERM 1184 1075507 - 1075518 + G 74 -2.2 -4.90906 | TGGTGATAATCATCG CCAT CAAC GTGG TTTTTGATATTATCG Daud_1026 1075350 - 1075937 + | hypothetical protein TERM 1185 1076811 - 1076795 - g 81 -6.5 -4.72272 | CGTCCTGACCAAAAA GGGCAAA GGA TATGCCC CGGCCGAGAAAAACC TERM 1186 1076843 - 1076825 - g 74 -2.4 -4.82901 | gap 1 CCCGGCCGAGAAAAA CCCG-GA TAAGTT TCACGGG GTCGGCCCGTTCGAC TERM 1187 1076977 - 1077022 + G 71 -5.4 -4.44046 | gap 2, opp_overlap 1076977, overlap 1076987 TCACCGCTGCAATGA CG-T-CGGGTACCGGCCTGGGG CCGT TTTCACGCCGGTTCCCGCAGCG TTTCTTTGACGTGGG TERM 1188 1076987 - 1076999 + G 78 -10.5 -4.08692 | opp_overlap 1076977, overlap 1076977 AATGACGTCGGGTAC CGGCC TGG GGCCG TTTTCACGCCGGTTC TERM 1189 1077843 - 1077818 - g 72 -2.5 -4.79683 | gap 1, overlap 1077819 AAGTGAGAAAAGAAA GCGG-GCCAG GCTGAAG CTGGCGCCGA GGTTGCTGAGGTAAG Daud_1027 1075953 - 1077857 + | deoxyxylulose-5-phosphate synthase TERM 1190 1077911 - 1077951 + G 81 -7.4 -4.52873 | CTCCAGGGGCTGTTT CCCCAGCCGCGAACGC GCCCGGTCG GCGATCATGGCCGGGG TTGTTTTTGTAAACG Daud_1028 1077861 - 1078685 + | hemolysin A Daud_1029 1078704 - 1079555 + | NAD(+) kinase Daud_1030 1079638 - 1080090 + | arginine repressor, ArgR TERM 1191 1081130 - 1081076 - g 91 -18.7 -2.94218 | gap 2 ACGCTGGACGATATA CTCCGCTTCCGAGAGACGGCGGCCGCG GAA CGTGACCGCC-TG-CTCGGAAGCGAAG AGGAGATTGCGGGCT Daud_1031 1080095 - 1081813 + | DNA repair protein RecN Daud_1032 1081908 - 1082189 + | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 1192 1082216 - 1082195 - f 72 -12.3 -2.60392 | gap 1, opp_overlap 1082195, overlap 1082194 GATTTTCTAATCAAC GGTGACGCCG TCC CGGCG-CACC TTTTCACCTGGGAAC TERM 1193 1082195 - 1082216 + F 91 -12.3 -4.13767 | gap 1, opp_overlap 1082194 1082195 GATTTTCTAATCAAC GGTGACGCCG TCC CGGCG-CACC TTTTCACCTGGGAAC Daud_1033 1082311 - 1083789 + | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 1194 1085142 - 1085131 - g 80 -5.8 -4.74504 | opp_overlap 1085130 1085131 ACCGTAACGGAAAAA CCAG GGCG CTGG GTTTCCTGGTGGGTC Daud_1034 1083786 - 1085231 + | glutamyl-tRNA(Gln) amidotransferase, B subunit Daud_1035 1085302 - 1086462 + | homocitrate synthase TERM 1195 1087179 - 1087199 + G 76 -12.5 -3.53444 | GCACGTTCGAGCCGG CCGCACCCG ATC CGGATGCGG TTTACGAACGAATAC Daud_1036 1086443 - 1087699 + | homoaconitate hydratase family protein Daud_1037 1087708 - 1088208 + | 3-isopropylmalate dehydratase, small subunit Daud_1038 1088405 - 1089415 + | isocitrate dehydrogenase (NAD(+)) TERM 1196 1089474 - 1089493 + F 100 -12.1 -4.67608 | overlap 1089481 CGCTTCGCGGTCCGG CCCCGGG TAAAAC CCCGGGG TTTTGTATTCCGGTG Daud_1039 1089611 - 1090852 + | glycosyl transferase, group 1 TERM 1197 1093251 - 1093240 - g 83 -7.2 -4.59773 | CCCGACCCCGAAAAA CCGG TGTG CCGG GTGTACAGTGAGGCC Daud_1040 1090888 - 1093344 + | nucleotidyl transferase Daud_1041 1094025 - 1094981 + | hydrogenase (NiFe) small subunit HydA Daud_1042 1095001 - 1096458 + | nickel-dependent hydrogenase, large subunit TERM 1198 1096980 - 1096994 + G 70 -12.8 -2.87564 | opp_overlap 1096979 CCCTTGGTACAGCAG GGCGGG ACG CCCGCC TGTGTGACGGCCTGC Daud_1043 1096482 - 1097324 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1199 1097423 - 1097435 + G 76 -9.1 -4.10178 | GACCCCGCTCCGCTG GGCCA TGC TGGCC TTTCTCGTCTTCTTC Daud_1044 1097367 - 1098572 + | putative hydrogenase cytochrome b subunit TERM 1200 1098598 - 1098633 + T 100 -14.7 -4.10925 | overlap 1098600 CAGACACCTTTTTCT CAGCGGACCGGAGGA CAAAGA TCCCCCGGTCCGCTA TTTTGGAAACTGTCT TERM 1201 1098600 - 1098631 + T 100 -17.3 -3.64984 | overlap 1098598 GACACCTTTTTCTCA GCGGACCGGAGGA CAAAGA TCCCCCGGTCCGC TATTTTGGAAACTGT Daud_1045 1100264 - 1098675 - | glycoside hydrolase family protein Daud_1046 1100998 - 1100264 - | hypothetical protein TERM 1202 1100663 - 1100650 - G 76 -9.5 -4.0162 | CGGTGACATCATAAA CCCGG AGCA CCGGG CGGGAGACCTGCCAC TERM 1203 1100962 - 1100947 - G 95 -2.4 -5.7946 | overlap 1100948 GGGTCAATAAAAAAA TCCCCG CGAC CAGGGC GACCAGGCCGACAAT TERM 1204 1101479 - 1101493 + G 100 -9.2 -4.99043 | ACCGGTGGCGGGACC GCCGCG AAC TGCGGC TTTTCTTTGTAAACG TERM 1205 1101900 - 1101884 - g 74 -13.7 -2.93723 | opp_overlap 1101880 1101897 1101898, overlap 1101861 1101879 GGTTGATGAACGAGA CCGCCAG CTT CTGGCGG CACTGGTTGGCGCTC TERM 1206 1102501 - 1102519 + G 72 -11.6 -3.28924 | GCCGGGCTGACTGCC GCCGCCCG CTG CGCGCGGC TTCTGGGCGACGGTG TERM 1207 1102866 - 1102846 - g 81 -6.8 -4.7173 | opp_overlap 1102849, overlap 1102849 GACGATATCGAAAAA GTACCAGG CAATC CCTGGTTC ATCTGTACCCTATGG Daud_1047 1101148 - 1103139 + | glycoside hydrolase 15-related Daud_1048 1103493 - 1103912 + | CoA-binding domain-containing protein TERM 1208 1104237 - 1104220 - g 76 -10.5 -3.90112 | TGTTCGGCAAGGAAA CCACCGG GCTA CCGGCGG AACTCCTCGAAGCGA TERM 1209 1104321 - 1104356 + G 77 -12.6 -3.54424 | gap 1 CTGTCCAACGCTGTG GCCGTGCTGGTGTA-CG AGG CGCTGCGCCAGCAGGGC TTTCCGGGACTCCGC Daud_1049 1103913 - 1104374 + | RNA methyltransferase TERM 1210 1104396 - 1104415 + F 70 -7.1 -4.09864 | gap 1 GTCAACTTTTCCCTC CCGGCAGG AAACA CC-GCCGG TTTTCCCGAATCCCT Daud_1050 1104452 - 1107679 + | DNA polymerase III, alpha subunit Daud_1051 1107777 - 1108016 + | tryptophan RNA-binding attenuator protein TERM 1211 1108004 - 1108027 + F 76 -11.8 -3.08206 | overlap 1108001 1108006 CACTGAGAATCACGG TATCCAGGGC TGAC GCTCTGGATA TAATTCTTTCTAGTC Daud_1052 1108095 - 1108298 + | hypothetical protein Daud_1053 1108329 - 1109156 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit Daud_1054 1109164 - 1110111 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 1212 1110130 - 1110152 + F 88 -11.3 -4.12532 | opp_overlap 1110129 TAAGAACTAATGCAT CATCCCCGA CCAGA TCGGGGGTG TTTGTCTATGACCGC Daud_1055 1110208 - 1111170 + | 6-phosphofructokinase TERM 1213 1111355 - 1111331 - g 84 -13.5 -3.71848 | overlap 1111332 CCGCCGCATCAACAA CGTCCGCACGG CCG CCGCGCGGACC GGCAGAACGGTCGGC TERM 1214 1111354 - 1111332 - g 87 -17 -2.82895 | overlap 1111331 CGCCGCATCAACAAC GTCCGCACGG CCG CCGCGCGGAC CGGCAGAACGGTCGG Daud_1056 1111185 - 1112942 + | pyruvate kinase TERM 1215 1113343 - 1113359 + G 100 -5.8 -5.73339 | CAGGCGCAAACCCTG CCGGCT TATTC AGCTGG TTTTTTTGTGCTTCT Daud_1057 1113043 - 1113630 + | alkaline phosphatase TERM 1216 1113644 - 1113654 + F 81 -8.2 -4.29432 | GACTGCCGGCCTGAC CGCC CTG GGCG TTTTCCTAAGGTTTC TERM 1217 1114971 - 1114995 + G 87 -18.6 -2.52543 | overlap 1114957 CCATCTGGTTCTGGG GGCAGGGCCG CCGGC CGGCCCTGCC TCCGTTCCGCGACCT Daud_1058 1114298 - 1115515 + | proposed homoserine kinase Daud_1059 1116199 - 1115606 - | superoxide dismutase TERM 1218 1116397 - 1116428 + H 71 -7.9 -3.98816 | opp_overlap 1116396 1116397 AGGTAACACAAGAAG CCCGCGGCTGG CTAACCTCCA CTCGCCGCGGG TTTGCTGTTCATTTC Daud_1060 1116716 - 1116847 + | NifU domain-containing protein TERM 1219 1117251 - 1117265 + F 100 -9.2 -5.34632 | GCCAGTCGTTTTCTG CCGGGG TAT CCTCGG TTTTTCTATTTTGTT TERM 1220 1118395 - 1118377 - g 71 -5.8 -4.2558 | opp_overlap 1118377 1118377, overlap 1118378 GAGGGCGGACGAAAA GCTGGCCC GGC GGGCCGGA CTTCTGCACGACGTC Daud_1061 1117322 - 1118863 + | metal dependent phosphohydrolase Daud_1062 1118888 - 1119676 + | metallophosphoesterase Daud_1063 1119777 - 1120037 + | stage V sporulation protein S TERM 1221 1120476 - 1120457 - g 78 -6.3 -4.58283 | GAACTGGCGGAAAAA CGTGCCG AGAGGG CGGCCCG GATGATCGCGCGCCT Daud_1064 1120163 - 1120975 + | phosphotransferase domain-containing protein Daud_1065 1121038 - 1121307 + | hypothetical protein TERM 1222 1121547 - 1121527 - g 72 -2.5 -4.69664 | overlap 1121528 1121539 1121540 CACATCACGGAAAAA CTCAGAAAG GAA CTCCCCGAA GGGACAGAGATTCTC Daud_1066 1121467 - 1121880 + | hypothetical protein TERM 1223 1122305 - 1122293 - g 70 -10.5 -3.54424 | CTCGACCGTTGGAAA CCCGG CTG CCGGG GGGTGAGACCCTGAA Daud_1067 1121950 - 1122558 + | phosphoglycerate mutase TERM 1224 1122809 - 1122831 + F 100 -10.5 -5.38054 | TCGTTTGTGCATCTT CCCCGGAAC CAGAA GCTCCGGGG TTTTTGTTTATCGGG TERM 1225 1123443 - 1123397 - g 83 -14.4 -3.40639 | AATGTCACTAATCAA TGCGCGATGTATTGCCGCCACT GCC AGCGGCGGCGAAACATCGGGGA GGTGGACCGGCATCA Daud_1068 1122875 - 1124134 + | lysine 2,3-aminomutase YodO family protein TERM 1226 1124140 - 1124151 + F 75 -5.8 -4.63184 | opp_overlap 1124129 1124139 1124140 CCGACCCTGAACAAG GGGA CAGT TCCC TTTTTCCAGTCCCTT TERM 1227 1124189 - 1124206 + F 100 -4 -5.75599 | overlap 1124173 1124190 AGTCGGCATTTGCCG ACCCGC TTCATT GCGGGG TTTTTTTCTCGTTTC TERM 1228 1124190 - 1124205 + F 71 -7.5 -4.02919 | overlap 1124173 1124189 GTCGGCATTTGCCGA CCCGC TTCATT GCGGG GTTTTTTTCTCGTTT Daud_1069 1124525 - 1124788 + | hypothetical protein Daud_1070 1124878 - 1126335 + | inosine-5'-monophosphate dehydrogenase TERM 1229 1126611 - 1126588 - g 73 -8.9 -3.98661 | CAGATTGAGGAGAAA GTGCTGCTC TGCCTG AAGCAGCAC GCTGGCTTCAAGCAG TERM 1230 1127797 - 1127778 - g 71 -9.2 -3.68261 | opp_overlap 1127792 TCAGAAGATCGCAAA CCACCCTC TGGT GCGGGTGG CAGTACGGATATCCA Daud_1071 1126468 - 1127844 + | hypothetical protein TERM 1231 1127872 - 1127860 - T 86 -10.5 -4.07885 | opp_overlap 1127860, overlap 1127847 TACGCGCCCCCAAAA GGGGC CTG GCCCC TTTTTTAGGTGTAGA TERM 1232 1127860 - 1127872 + T 100 -10.5 -5.1287 | opp_overlap 1127847 1127860 TACGCGCCCCCAAAA GGGGC CTG GCCCC TTTTTTAGGTGTAGA Daud_1072 1128797 - 1127877 - | radical SAM domain-containing protein TERM 1233 1129081 - 1129066 - g 74 -2.6 -4.82901 | gap 1 GGTTTTGCAGAAAAA TGCCGAT CTC ATCG-CA CGCAAAACCGGTGTG TERM 1234 1129768 - 1129751 - g 70 -9.9 -3.57144 | overlap 1129756 CTGGGGATCGTCAAA GATACCC CCGA GGGTATC GAGGTCCGGACGCAC Daud_1073 1128986 - 1130281 + | homoserine dehydrogenase Daud_1074 1130278 - 1131219 + | homoserine kinase TERM 1235 1131562 - 1131594 + G 76 -13.3 -3.44051 | opp_overlap 1131559 1131557 TCGACATAGACACTG CCCGGCTGCGGTCCG AAC TGGACCGGGGGCGGG TTGTGGTAGTGGCCG Daud_1075 1131210 - 1132442 + | aspartate kinase TERM 1236 1133065 - 1133054 - g 74 -5.8 -4.45485 | ACCAGATCGACAAAA TGGC CCAG GCCA AGGAAGTGTTCAAGA Daud_1076 1132666 - 1133928 + | sulfate adenylyltransferase TERM 1237 1133995 - 1133938 - f 100 -15.6 -4.92363 | gap 1, opp_overlap 1133947 1133949, overlap 1133939 1133949 1133977 AAATAGTCACAAAAA GCCGCTTAGAAGGGCCCGCTTT-CGGA ATAAG TCCGGAAAGCGGGCCCTCTTCTGCGGG ACTGGGAAGAAAGCC TERM 1238 1133994 - 1133939 - f 100 -19.1 -3.53791 | gap 1, opp_overlap 1133947 1133949, overlap 1133938 1133949 1133977 AATAGTCACAAAAAG CCGCTTAGAAGGGCCCGCTTT-CGGA ATAAG TCCGGAAAGCGGGCCCTCTTCTGCGG GACTGGGAAGAAAGC TERM 1239 1133947 - 1133986 + F 100 -17.3 -3.29511 | gap 1, opp_overlap 1133939 1133938 1133949 1133977, overlap 1133949 CAAAAAGCCGCTTAG AAGGGCCCGCTTT-CGGA ATAAG TCCGGAAAGCGGGCCCTC TTCTGCGGGACTGGG TERM 1240 1133949 - 1133984 + F 100 -19.9 -3.21593 | gap 1, opp_overlap 1133939 1133938 1133949 1133977, overlap 1133947 AAAAGCCGCTTAGAA GGGCCCGCTTT-CGGA ATAAG TCCGGAAAGCGGGCCC TCTTCTGCGGGACTG TERM 1241 1133984 - 1133949 - f 100 -19.9 -3.30903 | gap 1, opp_overlap 1133949 1133947, overlap 1133939 1133938 1133977 AAAAGCCGCTTAGAA GGGCCCGCTTT-CGGA ATAAG TCCGGAAAGCGGGCCC TCTTCTGCGGGACTG TERM 1242 1134298 - 1134330 + F 71 -4.9 -4.67256 | opp_overlap 1134298 1134297 GACCAGAGAATTAAT CCGCAAGCTCT CGGTACATTAA AAAGCTTGCGG TTTTCTGGTTTCTTG TERM 1243 1135459 - 1135419 - g 71 -9.6 -3.72576 | TGGTGGCCGACGAAA TTCGCAAGCTGGCCGAGC AGTCG GCCCGGACCGCTGACGAA ATCCTGGTGATTGCC Daud_1077 1134674 - 1135783 + | methyl-accepting chemotaxis sensory transducer TERM 1244 1135877 - 1135908 + F 74 -11.6 -3.17146 | overlap 1135876 1135873 GTTTCTAGGATTGTG CCACCTCCTGTTGG ATCG TTGACGGGAGGTGG TCTATTGTAAGCAGG Daud_1078 1136399 - 1137661 + | sulfate adenylyltransferase TERM 1245 1137779 - 1137744 - g 71 -8.3 -3.85704 | gap 1, overlap 1137739 1137745 GGATCAACGAGGAAA GGTTCGCCAAGCTGCA GGCGG TGAAGCTGGGCG-ACC TGCCCGAGGAGGCGT Daud_1079 1137692 - 1137997 + | hypothetical protein TERM 1246 1138066 - 1138024 - f 75 -11.1 -3.41126 | gap 1, opp_overlap 1138027 1138048 1138050 CCATAAAGCTTAGAA CTGGGGAGCGGCCCGCGTCC GGGT GGA-GCGGGCCGCGACCTTG TGCGGCCTGCATACT TERM 1247 1138027 - 1138063 + F 100 -15.8 -3.30243 | gap 1, opp_overlap 1138024, overlap 1138048 1138050 TAAAGCTTAGAACTG GGGAGCGGCCCGCGTCC GGGT GGA-GCGGGCCGCGACC TTGTGCGGCCTGCAT Daud_1080 1138143 - 1138331 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1248 1138362 - 1138380 + T 100 -10.3 -4.89477 | opp_overlap 1138376 CTAATCCGGCCAAGG CTCCCCT GAAAG AGGGGAG TTTTCTTGTTGCGAA Daud_1081 1139114 - 1138347 - | polysaccharide deacetylase TERM 1249 1140301 - 1140341 + G 83 -4.6 -5.00616 | CCTGGCGGTCTACCG CGACGCCCTGGCGGCC GAGGGGAAA GGCTGTTTGGGTGTTG TTTTTTCCCAGGACG Daud_1082 1139201 - 1140370 + | glycosyl transferase, group 1 TERM 1250 1142541 - 1142553 + G 71 -4.7 -4.4727 | ACGGTGATGATGTTT GGGGC TCC GCCGC TTTTGTACCTGTTCC Daud_1083 1140402 - 1142585 + | hypothetical protein Daud_1084 1142591 - 1143355 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase Daud_1085 1143469 - 1143858 + | adenosylmethionine decarboxylase Daud_1086 1144118 - 1144867 + | hypothetical protein Daud_1087 1144872 - 1145618 + | ubiquinone/menaquinone biosynthesis methyltransferase Daud_1088 1145647 - 1146501 + | 4-hydroxybenzoate polyprenyltransferase, putative Daud_1089 1146549 - 1147655 + | radical SAM domain-containing protein TERM 1251 1147758 - 1147781 + G 72 -3.7 -4.63218 | CCGAACTGGTGAAGG GCCCGCCCA CACGGC TGAACGGGC TTTTATTGCGCGGGG Daud_1090 1147679 - 1148503 + | hypothetical protein TERM 1252 1148868 - 1148904 + G 74 -14.6 -2.62043 | gap 1, overlap 1148865 1148866 1148861 TACTACATCGGAATG CTTG-AGGCCGTCAAGG CGCG CTTTGACGGCCTGCAGG TGCATTCGTTCTCGC TERM 1253 1149502 - 1149514 + G 73 -6.9 -4.36914 | opp_overlap 1149493, overlap 1149503 AGATCATCCGGATGA TCCGC GAC GCGGG TTTTGTCCCGGCGCA Daud_1091 1148496 - 1149566 + | radical SAM domain-containing protein TERM 1254 1149894 - 1149881 - g 72 -3.7 -4.56597 | TGTCCGTGGGAAAAA CCGTC GCCT GCCGG TTCCAGTACGGTCAC Daud_1092 1149826 - 1150506 + | hypothetical protein Daud_1093 1150545 - 1151966 + | L-seryl-tRNA(Sec) selenium transferase Daud_1094 1151963 - 1153870 + | selenocysteine-specific translation elongation factor TERM 1255 1153890 - 1153871 - f 100 -16.4 -3.6053 | opp_overlap 1153869 1153879, overlap 1153867 CTGGTTAGAAAGTAA GGGCGCCC CGGC GGGCGCCC CGTGTGCTCTCCGTT Daud_1095 1153979 - 1154449 + | hypothetical protein TERM 1256 1154612 - 1154588 - f 77 -8.5 -4.17048 | opp_overlap 1154587 GGTGGTGGAAAACAA GGGACCGGC AGCCCAA GCCGGTACC GGTTTATAAGCCTTT TERM 1257 1155448 - 1155408 - g 70 -11.8 -3.14881 | gap 1 GAACGGGTTCATCAA CCGCCC-GGCCACCCCC GAATCGGT GCGGGCGGCCCAGGCGG CGCTGGACGGACACG Daud_1096 1154662 - 1155576 + | cell wall hydrolase, SleB TERM 1258 1155600 - 1155619 + F 100 -15 -5.71712 | GAAAATCCTTGTTCG CCGGACCC GTTG GGGTCCGG TTTTTTTATGTCCGG TERM 1259 1156045 - 1156035 - f 74 -2.4 -5.00895 | TTCACTATAGAAAAA TGGC TTG GCCG CAAATGTAACATAAT TERM 1260 1157144 - 1157159 + G 78 -3.2 -4.98911 | overlap 1157138 1157144 CCTCTCGGCCGGCAT CGCC GTGTTCGG GGCG TTTGTTTTTATGATC TERM 1261 1157846 - 1157858 + G 71 -5.5 -4.29119 | overlap 1157845 GGCTTTTGGCTTTTT CACTC CGT GGGTG TTGTTTATTGTCATC Daud_1098 1156164 - 1158125 + | NADH dehydrogenase (quinone) Daud_1099 1158122 - 1158994 + | respiratory-chain NADH dehydrogenase, subunit 1 Daud_1100 1159018 - 1159443 + | NADH ubiquinone oxidoreductase, 20 kDa subunit Daud_1101 1159462 - 1159824 + | hydrogenase subunit, putative Daud_1102 1159833 - 1160909 + | NADH-ubiquinone oxidoreductase, chain 49kDa Daud_1103 1160959 - 1161339 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1262 1161383 - 1161368 - f 80 -11.8 -3.4252 | opp_overlap 1161368 CCTGACGGACGAGAA GGGCCG GGTG CGGCCC TTTTTTCCTTGCCGG TERM 1263 1161368 - 1161383 + F 100 -11.8 -5.26875 | opp_overlap 1161368 CCTGACGGACGAGAA GGGCCG GGTG CGGCCC TTTTTTCCTTGCCGG Daud_1104 1161481 - 1162074 + | formylmethanofuran dehydrogenase, subunit E region TERM 1264 1162240 - 1162197 - g 100 -19 -3.737 | gap 1, opp_overlap 1162231 1162233, overlap 1162200 GAAGGGTGCAGCAAA GAAGGGGACAGTCTCC-CTGG GGC CCAAAGGGGACTGTCCCCCTC ATGGGGATATTCCTC TERM 1265 1162237 - 1162200 - g 100 -17.1 -4.00042 | gap 1, opp_overlap 1162231 1162233, overlap 1162197 GGGTGCAGCAAAGAA GGGGACAGTCTCC-CTGG GGC CCAAAGGGGACTGTCCCC CTCATGGGGATATTC Daud_1105 1162087 - 1162932 + | hypothetical protein TERM 1266 1162966 - 1162984 + F 74 -10.2 -3.53811 | GAACGCGGGACGGAG CAGGACGC CGG GCGCCCTG TTTGCGCGGGGTGGG Daud_1106 1163061 - 1164230 + | glycosyl transferase, group 1 Daud_1107 1165143 - 1164295 - | degV family protein Daud_1108 1166745 - 1165153 - | Dak phosphatase TERM 1267 1165789 - 1165812 + g 76 -11 -3.75332 | GGATACGACCGCCAC CAGCCCGAGG GGTT TCTTGGGCTG TTTGAGTTCGGCGGT TERM 1268 1166946 - 1166924 - H 100 -13.4 -4.1721 | overlap 1166925 AGTGAGACCTCAAAA CGGCTTCCCC TGA GGGGAAGCCC TCCCCGCCAAAGGAG TERM 1269 1166945 - 1166925 - H 100 -16.9 -3.09844 | overlap 1166924 GTGAGACCTCAAAAC GGCTTCCCC TGA GGGGAAGCC CTCCCCGCCAAAGGA TERM 1270 1168239 - 1168227 - g 74 -4.8 -4.67353 | CGACCTACTGAAAAA GGCT GTCGG AGCC GAGGCAATCCAACTG Daud_1109 1166971 - 1168389 + | hypothetical protein Daud_1110 1168518 - 1169786 + | GTP-binding protein, HSR1-related Daud_1111 1169958 - 1170602 + | adenylate kinase TERM 1271 1170619 - 1170653 + F 100 -16.6 -5.24129 | opp_overlap 1170626, overlap 1170620 CACTGGCAGTTTTCG TTATCAACTCCCGGAA CAC TTCCGGGAGTTGACAG TTTTTTATGCGGCCA TERM 1272 1170620 - 1170652 + F 100 -17.9 -3.73995 | opp_overlap 1170626, overlap 1170619 ACTGGCAGTTTTCGT TATCAACTCCCGGAA CAC TTCCGGGAGTTGACA GTTTTTTATGCGGCC TERM 1273 1170646 - 1170626 - f 93 -15.5 -3.14211 | opp_overlap 1170620 1170619 AGTTTTCGTTATCAA CTCCCGGAA CAC TTCCGGGAG TTGACAGTTTTTTAT Daud_1112 1170803 - 1171273 + | hypothetical protein Daud_1113 1171312 - 1171590 + | putative ComF operon protein Daud_1114 1171624 - 1171806 + | hypothetical protein TERM 1274 1171798 - 1171786 - f 70 -6.9 -4.07786 | opp_overlap 1171786 GACAAAACGCAGAAA CCGAC AAA GCCGG TAGGTTAGAACTCCG TERM 1275 1172522 - 1172564 + G 70 -11.9 -3.23692 | CCTGCGGGGTCTGTT GGCCAACAGTCACGTACGG ACGCA CCTTTCGGGCCTGTTGGCC TTCATACTGCTGGTC TERM 1276 1174047 - 1174005 - g 86 -7.7 -4.72272 | gap 2, overlap 1174027 1174030 TTCGGGCAGGAAAAA CGCCCGGTGGAACCGTACTAC ACC ATCGTGCGGCTCC-C-GGGCG AGGAGGCCCCTGAAT TERM 1277 1174260 - 1174234 - g 70 -11.7 -3.14961 | gap 1, overlap 1174232 ACCAGGACCAATACA TCTCCCAGCAGC TTAC GCTG-TGGGAGA ACCGGGGTACGCGGG Daud_1115 1171929 - 1174721 + | hypothetical protein Daud_1116 1174841 - 1175953 + | 6-phosphofructokinase TERM 1278 1176276 - 1176236 - g 83 -13.2 -3.93236 | overlap 1176227 GAGGAACGGGAGAAA GCCGC-GCGCGAGCAGGCGG CGG CCG-CGGCCCGGGCAGCGGC ACCTGACCCAAGTAC Daud_1117 1176047 - 1176394 + | sec-independent translocation protein mttA/Hcf106 Daud_1118 1176527 - 1176781 + | twin arginine-targeting protein translocase Daud_1119 1176931 - 1177182 + | twin arginine-targeting protein translocase TERM 1279 1177174 - 1177159 - f 86 -11.8 -3.78124 | ACCAAGGAGGAAGAA GCGCCG AAGT CGGCGC AGAGCTAAGTTTTAT TERM 1280 1177450 - 1177477 + G 74 -10 -3.69621 | gap 1, overlap 1177464 ACGACCTGCAATTCC TAGGT-GTCACCG AGC CGGTGATGACCTA TTTCCGGTTGTCCCT TERM 1281 1177623 - 1177634 + G 83 -7.2 -4.5774 | overlap 1177622 TACCTGGCGTTTATC GGCG GGGT CGCC TTTTCCTTCTTCGTG Daud_1120 1177269 - 1178039 + | Sec-independent protein translocase, TatC subunit Daud_1121 1178102 - 1179031 + | malate dehydrogenase, NAD-dependent TERM 1282 1179212 - 1179172 - T 74 -10.6 -3.61517 | gap 2, opp_overlap 1179174 1179179, overlap 1179174 1179179 ACTGGCCCCCAACAA CAGAAAAGCCACCCCTGACC ATG GGCC-G-GGTGGCTTTTCTT GTTAGCACTCCGTAT TERM 1283 1179210 - 1179174 - T 88 -13.2 -3.38812 | gap 2, opp_overlap 1179174 1179179, overlap 1179172 1179179 TGGCCCCCAACAACA GAAAAGCCACCCCTGACC ATG GGCC-G-GGTGGCTTTTC TTGTTAGCACTCCGT TERM 1284 1179174 - 1179210 + T 79 -11 -3.63694 | gap 2, opp_overlap 1179174 1179172 1179179, overlap 1179179 TGGCCCCCAACAACA GAAAAGCCACCCCTGACC ATG GGCC-GG-GTGGCTTTTC TTGTTAGCACTCCGT TERM 1285 1179205 - 1179179 - T 86 -7.3 -4.79752 | gap 2, opp_overlap 1179174 1179179, overlap 1179174 1179172 CCCAACAACAGAAAA GCCACCCCTGACC ATG GGCC-G-GGTGGC TTTTCTTGTTAGCAC TERM 1286 1179179 - 1179205 + T 80 -5.1 -4.89477 | gap 2, opp_overlap 1179179 1179174 1179172, overlap 1179174 CCCAACAACAGAAAA GCCACCCCTGACC ATG GGCC-GG-GTGGC TTTTCTTGTTAGCAC Daud_1122 1179739 - 1179227 - | heat shock protein Hsp20 Daud_1123 1179810 - 1180841 + | hypothetical protein Daud_1124 1180888 - 1181409 + | hypothetical protein Daud_1125 1182348 - 1181566 - | daunorubicin resistance ABC transporter, inner membrane subunit B Daud_1126 1183332 - 1182352 - | daunorubicin resistance ABC transporter ATPase subunit TERM 1287 1182897 - 1182873 - G 80 -4.9 -4.87665 | GTTCATCTAGAAAAA GGACTCCCG GCCGGTG CAGGAGGCC CCGGGCGATCTCCAG Daud_1127 1184365 - 1183658 - | ABC transporter related TERM 1288 1184214 - 1184188 - G 78 -14.4 -3.01712 | CCCGGCCCGCGAACA CGATCCGTCCCC TCC GGGGGCGGATCA GTCCGGAGATGGTCC Daud_1128 1185135 - 1184365 - | ABC transporter related TERM 1289 1185162 - 1185181 + r 71 -6.4 -4.2687 | gap 1, overlap 1185157 1185156 CCGCCTCCTACGTCC CACCGGCCG GTG TGGC-GGTG TTTCTCGTTTTTGAC Daud_1129 1186053 - 1185154 - | inner-membrane translocator Daud_1130 1186939 - 1186058 - | inner-membrane translocator TERM 1290 1186101 - 1186090 - G 70 -7.2 -4.07568 | GCGGCTGGCCCAAAA GGCC CGAA GGCC GGATCAGGAGGACCA TERM 1291 1186653 - 1186633 - G 76 -9 -3.96452 | overlap 1186627 1186651 GAATGAAAATGGAAA CGCCGATC GAAGA GATCAGCG GGGCCAGGCGGGTGG TERM 1292 1186998 - 1186964 - R 79 -11.4 -3.67792 | CCATATTTATTTAAA GCGGCAGCCACTGC GCTAAAG GCAATGGCCGCCTC AAATCGGACGCCGGG Daud_1131 1188186 - 1187017 - | extracellular ligand-binding receptor Daud_1132 1189311 - 1188379 - | hypothetical protein TERM 1293 1188478 - 1188450 - G 81 -13.1 -3.77831 | overlap 1188444 1188442 1188451 TGATGAAGACGTAAA GGCCGGTGGCG ATCACGG CGCCACCGGCG AGTTGCAGGAGGCCC TERM 1294 1188477 - 1188451 - G 83 -16.6 -2.86217 | overlap 1188444 1188442 1188450 GATGAAGACGTAAAG GCCGGTGGCG ATCACGG CGCCACCGGC GAGTTGCAGGAGGCC TERM 1295 1189362 - 1189384 + r 74 -4.8 -4.73635 | ATCCTAATGCTCTCC GGAATTCTTG TCT CCCGAATTCC TTTTGTTAAATTCTG Daud_1133 1189801 - 1189445 - | hypothetical protein TERM 1296 1189582 - 1189629 + g 86 -8.2 -4.54727 | overlap 1189583 TGGCTTCCTTCACCT TGGTATCGGCGCCCGACAGGTT GTTG AACCCGGCGAGGGCCGACGCCG TTTTGATTTCGCCCC TERM 1297 1189679 - 1189693 + g 83 -9.2 -4.31164 | CTTGTAAAGCCTGAT GGCCGG TGC CCGGTC TTTCTCTTCTATGGC Daud_1134 1190839 - 1189880 - | hypothetical protein TERM 1298 1190180 - 1190165 - G 80 -6.1 -4.72272 | GTTCTGGATCAAAAA GGCCA GGGCCG TGGCC GGTATGGCCGTCGCC TERM 1299 1190828 - 1190840 + g 73 -3.3 -4.68384 | overlap 1190827 1190829 AATCTGTTGTATTTT GGTGG GCG CCACG TTTTGTTCCCTCGAT TERM 1300 1191093 - 1191082 - H 70 -3 -4.74215 | overlap 1191073 AGAGGAGGAAGAAAA TCTT GCCC AAGA TTAACAAAAAGGTTT Daud_1135 1191084 - 1191890 + | extracellular solute-binding protein TERM 1301 1191901 - 1191943 + F 100 -21.5 -3.53811 | gap 1, opp_overlap 1191893 TCTAACAGCCTAGTC CGCCGAATGTGCGTGACACC ACCC GGTGTCGCGCGCATTCG-CG TTTGGCCGCGGTGGA TERM 1302 1192091 - 1192136 + G 78 -6.8 -4.56597 | overlap 1192084 CGGGCTTTGCCGCCT GTCG-CGCAGCCGGGTGTTGCG CTAC CTCGCCACC-GGCTACGTCGAC TTTTTCCGGGGCACG Daud_1136 1191969 - 1192676 + | polar amino acid ABC transporter, inner membrane subunit Daud_1137 1192663 - 1193385 + | ABC transporter related TERM 1303 1193451 - 1193465 + T 74 -10 -3.62522 | opp_overlap 1193451 CGTCCGGGAGGAAAA TGGGGT CTG ACCCCA TTCTTGCGCGGCTTG TERM 1304 1193465 - 1193451 - T 86 -10 -4.25104 | opp_overlap 1193451 CGTCCGGGAGGAAAA TGGGGT CTG ACCCCA TTCTTGCGCGGCTTG Daud_1138 1194227 - 1193499 - | nitrite and sulphite reductase 4Fe-4S region Daud_1139 1195196 - 1194315 - | thioredoxin-disulfide reductase Daud_1140 1195420 - 1195292 - | hypothetical protein Daud_1141 1195780 - 1195547 - | putative NADH-dependent flavin oxidoreductase Daud_1142 1196255 - 1195800 - | GCN5-related N-acetyltransferase TERM 1305 1196705 - 1196688 - g 74 -4.7 -4.56597 | GCCCGGCGCCAAAAA CCCGGGC TGCG GCCCCAG CACCTGAAAGCGGTG Daud_1143 1196538 - 1197632 + | RNA-3'-phosphate cyclase TERM 1306 1197743 - 1197717 - T 100 -20.9 -3.05384 | opp_overlap 1197717 1197735 1197738 GCCCGTTCCACGTAA TCCGGCCCCGG TCGGG CCGGGGCCGGA TTTGTGCGGGCATCC TERM 1307 1197717 - 1197743 + T 100 -21.6 -3.86346 | opp_overlap 1197717, overlap 1197735 1197738 GCCCGTTCCACGTAA TCCGGCCCCGGT CGG GCCGGGGCCGGA TTTGTGCGGGCATCC Daud_1144 1199760 - 1197772 - | hypothetical protein TERM 1308 1198759 - 1198793 + g 74 -12.7 -3.2963 | overlap 1198760 TCTATCCGGCACGAC GGCCGGGGCCGGCTC ACGCA GACCCGGCACCGGCA TTATGGGGCCGTACT TERM 1309 1198760 - 1198792 + g 80 -16.2 -2.57564 | overlap 1198759 CTATCCGGCACGACG GCCGGGGCCGGCTC ACGCA GACCCGGCACCGGC ATTATGGGGCCGTAC Daud_1145 1200119 - 1200829 + | ABC transporter related TERM 1310 1200904 - 1200924 + G 72 -11.9 -3.28714 | overlap 1200902 TCGCTATTGCGCTGT TGGTGATGC TGG GCATCGCCA TGTTCTCCTCCATGT TERM 1311 1202983 - 1203029 + G 73 -11.5 -3.5394 | gap 2 TGCTGCCCGCTGTCC CCGGCCTGGTCCTGGGCGTCGCC GTA GGCTACGCCTGGG-CC-GCCTGG TTTGCCGCCGCCTTT Daud_1146 1200837 - 1203200 + | hypothetical protein Daud_1147 1203215 - 1204402 + | RND family efflux transporter MFP subunit Daud_1148 1205054 - 1204407 - | methyltransferase type 11 Daud_1149 1205876 - 1205055 - | ABC-3 protein TERM 1312 1205458 - 1205447 - G 76 -5.8 -4.63218 | CCTCCTTGAAGAAAA GGAC GACC GTCC CCAGAACCAGCAGGG TERM 1313 1205536 - 1205548 + g 76 -9.1 -4.07568 | opp_overlap 1205534, overlap 1205534 CTCCCCCACATCAGC CCCAG GGC CTGGG TTTTCGGCCCGGGCA Daud_1150 1206684 - 1205866 - | ABC transporter related Daud_1151 1207615 - 1206740 - | periplasmic solute binding protein TERM 1314 1207679 - 1207660 - R 79 -2.8 -5.1523 | gap 1, opp_overlap 1207677, overlap 1207661 1207664 TTGATAACAGAAAAA CCAC-GGAG ATG CTCCTGCAG GGTCCAAACCTCCGT TERM 1315 1207677 - 1207708 + r 72 -3.7 -4.82855 | gap 1, opp_overlap 1207660, overlap 1207679 ACGGAGATGCTCCTG CAGGGTCC-AAACC TCCGT GGTTTTGGTCCATG TTTTTAGATTTGGTA Daud_1152 1208476 - 1207844 - | hypothetical protein TERM 1316 1208525 - 1208542 + r 74 -4.8 -4.76963 | gap 1, overlap 1208500 1208499 CTTTGTCTATTTATT CGCAGGC CGCCA GCC-GCG TTTTATGTTCTCTCA Daud_1153 1209104 - 1208520 - | hypothetical protein Daud_1154 1210891 - 1209155 - | phosphotransferase domain-containing protein Daud_1155 1211743 - 1210895 - | beta-lactamase domain-containing protein Daud_1156 1212799 - 1211876 - | putative radical SAM protein Daud_1157 1213247 - 1212807 - | hypothetical protein Daud_1158 1213528 - 1213244 - | acylphosphatase TERM 1317 1213655 - 1213668 + G 76 -9.5 -4.07568 | opp_overlap 1213643 AAAGTCTGTCGGGGA CCGGC CCTG GCCGG TTTTCCGGCCCACAA Daud_1159 1213631 - 1214524 + | PP-loop domain-containing protein Daud_1160 1215024 - 1214521 - | appr-1-p processing domain-containing protein TERM 1318 1214836 - 1214812 - G 71 -11.3 -3.51232 | opp_overlap 1214827, overlap 1214808 CGCGTGGTAAACGAA CCGCGCCGGAA GCC TGCCGGCGCCG GTCACGTACACCTGG Daud_1161 1215707 - 1215021 - | Zn-dependent hydrolase of the beta-lactamase fold TERM 1319 1217370 - 1217354 - g 100 -10.1 -5.05113 | overlap 1217364 CCGAGAGAAAGAAAA CCGGGAA TGA CTCCCGG CAACCTTGGGGCCGG Daud_1162 1215884 - 1217440 + | amino acid permease-associated region Daud_1163 1217967 - 1218284 + | carbohydrate-binding family 25 protein TERM 1320 1218353 - 1218337 - f 100 -5 -5.44721 | opp_overlap 1218337 ACCACCTCAAAAAAA GGGCGC GTTGT GCGTCC TTTTTTGTGCGGCCG TERM 1321 1218337 - 1218353 + F 100 -7.9 -5.24129 | opp_overlap 1218337 ACCACCTCAAAAAAA GGGCGCG TTG TGCGTCC TTTTTTGTGCGGCCG TERM 1322 1218793 - 1218775 - g 74 -5.2 -4.56597 | GTCGGTGGGGAAAAA GGCGGC CCGGATC ACCGCC CAGCACCTGTCCGCC Daud_1164 1218407 - 1219048 + | hypothetical protein Daud_1165 1219716 - 1219030 - | rhomboid family protein Daud_1166 1220960 - 1219812 - | iron-containing alcohol dehydrogenase Daud_1167 1221514 - 1220990 - | nitroreductase Daud_1168 1222713 - 1221658 - | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) Daud_1169 1223491 - 1222718 - | phosphoribosylformylglycinamidine synthase I Daud_1170 1226331 - 1223488 - | phosphoribosylformylglycinamidine synthase II TERM 1323 1226139 - 1226152 + g 93 -8.1 -5.02074 | overlap 1226138 1226137 AGTCCTGAAAGGTTT CCTCC CAGA GGAGG TTTTTTGCCAAATAA Daud_1171 1226975 - 1226379 - | hypothetical protein Daud_1172 1228288 - 1226972 - | small GTP-binding protein TERM 1324 1227912 - 1227890 - G 70 -7.7 -4.09685 | CCCCAGCCGGTAAAA GTCGGCC AGCGGCAAG GGCCGAC TGAAATCGTCGACTT Daud_1173 1229640 - 1228285 - | hypothetical protein Daud_1174 1230106 - 1229579 - | hypothetical protein TERM 1325 1229828 - 1229799 - GR 85 -5.6 -5.06816 | opp_overlap 1229822, overlap 1229801 ATGCGGTAACAAAAA GCCGCCAGTC GGAGCTTGGA GTCCGGCGGC ACGGTGATCCGGTGC Daud_1175 1230561 - 1230103 - | hypothetical protein Daud_1176 1231773 - 1230580 - | stage II sporulation P family protein TERM 1326 1231131 - 1231105 - G 76 -5.6 -4.56597 | overlap 1231107 CTGTTCGCGGAAAAA CTCCGGATCCGG CAC CCCGTCCCGGTG GATGTCAATCAGGGC Daud_1177 1232479 - 1231763 - | hypothetical protein TERM 1327 1231952 - 1231936 - G 72 -4.3 -4.63527 | overlap 1231937 1231938 CCACCACGTCAAAAA CCCCGGC ACC GCCGAAA TGGACCAAGCCAGTC TERM 1328 1232593 - 1232556 - R 100 -23.6 -3.67417 | opp_overlap 1232563, overlap 1232563 ATATGCAATTGCAAA CCGAAAAGCCCCGGCG GTTAAT CGCCGGGGCTTTTCAG AAAAACAATTGCTAA TERM 1329 1232563 - 1232586 + r 100 -17.4 -4.07568 | opp_overlap 1232563 1232556 ATTGCAAACCGAAAA GCCCCGGCGG TTAA TCGCCGGGGC TTTTCAGAAAAACAA TERM 1330 1232586 - 1232563 - R 100 -16.7 -4.35926 | opp_overlap 1232563, overlap 1232556 ATTGCAAACCGAAAA GCCCCGGCG GTTAAT CGCCGGGGC TTTTCAGAAAAACAA Daud_1178 1234638 - 1232605 - | hydroxymethylbutenyl pyrophosphate reductase Daud_1179 1235234 - 1234653 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1331 1235136 - 1235154 + g 86 -11.6 -4.18697 | opp_overlap 1235135 1235132 AGCGGCGAGAATCAG CCCGCCCG AAA CGGGCAGG TTTTCAGCTCCTTTT Daud_1180 1235933 - 1235235 - | cytidylate kinase TERM 1332 1235511 - 1235475 - G 91 -2.8 -5.45652 | gap 1, overlap 1235476 1235477 AGCCGTAACAAAAAA CTTGTGCTCGG-CGTCC GGCA GGACGGCCGTGCCGATG TCGCGGCCCTCCATA Daud_1181 1237307 - 1236018 - | 3-phosphoshikimate 1-carboxyvinyltransferase Daud_1182 1238447 - 1237353 - | prephenate dehydrogenase TERM 1333 1238069 - 1238037 - G 74 -11.9 -3.53444 | GTATGCGCCCTCAAA CAGGTAGCGGTCGGC ACC GCCGATCCCTGCCTG CTCCGAGCCGGCCAT TERM 1334 1238263 - 1238275 + g 70 -10.5 -3.57792 | ACCACCAGTTCCGCC CCGGC CAG GCCGG TTTGCGGATCGGTGG Daud_1183 1239492 - 1238479 - | phospho-2-dehydro-3-deoxyheptonate aldolase Daud_1184 1240585 - 1239497 - | histidinol-phosphate aminotransferase Daud_1185 1241496 - 1240693 - | tryptophan synthase, alpha subunit TERM 1335 1240883 - 1240862 - G 71 -5.8 -4.34402 | gap 1, opp_overlap 1240872 CGGGCGATACCAAAA CCGACC-GC GATCG GCAGGCCGG TATGCTCGCGCACGG TERM 1336 1241492 - 1241471 - G 81 -13.7 -3.53811 | gap 1, opp_overlap 1241471 CGCAGCCGCCCGAAA GCGGCGG-CG ATC CGTCCGCCGC TCATTGCCACACCTC TERM 1337 1241471 - 1241492 + g 72 -13.7 -2.71144 | gap 1, opp_overlap 1241471 CGCAGCCGCCCGAAA GCGGCGG-CG ATC CGTCCGCCGC TCATTGCCACACCTC Daud_1186 1242677 - 1241493 - | tryptophan synthase, beta subunit TERM 1338 1242333 - 1242291 - G 95 -13.2 -4.25848 | AATGGTGCAGGAAAA GCCGAACAGCGCGGCCGCCG TGG CGGTGGCCACTCCGTGCTGC CCGGCCCCCGTCTCC Daud_1187 1243288 - 1242674 - | phosphoribosylanthranilate isomerase Daud_1188 1244121 - 1243294 - | indole-3-glycerol-phosphate synthase Daud_1189 1245136 - 1244096 - | anthranilate phosphoribosyltransferase Daud_1190 1245726 - 1245133 - | glutamine amidotransferase of anthranilate synthase Daud_1191 1247191 - 1245728 - | anthranilate synthase component I TERM 1339 1246151 - 1246134 - G 71 -12.7 -3.06183 | opp_overlap 1246127, overlap 1246116 GGTACCCGGACCGAA CCGGGTG CGCA CACCCGG GCCAAGTCGTTTCGG TERM 1340 1246595 - 1246606 + g 76 -5.8 -4.56597 | ACCGTGACCCGGGAA CTGG CCGT CCAG TTTTTCCCGCAGGCG TERM 1341 1247241 - 1247220 - R 100 -10.1 -5.0916 | opp_overlap 1247220 TCCGGAACACAAAAA CCGGCACTC AGAA GAGCACCGG TATGGTCTTGCGCAC Daud_1192 1248466 - 1247372 - | metal dependent phosphohydrolase Daud_1193 1249609 - 1248488 - | metal dependent phosphohydrolase Daud_1194 1250002 - 1249637 - | chorismate mutase Daud_1195 1250483 - 1250022 - | hypothetical protein Daud_1196 1251277 - 1250561 - | pseudouridine synthase Daud_1197 1251862 - 1251326 - | nucleoside recognition domain-containing protein Daud_1198 1252455 - 1251856 - | nucleoside recognition domain-containing protein TERM 1342 1252517 - 1252507 - R 70 -6.8 -4.08216 | TGAGGGGCTCGAAAA GGGT AGA ACCC GGCCGTCCTTGGCCT Daud_1199 1253104 - 1252730 - | hypothetical protein Daud_1200 1253751 - 1253101 - | hypothetical protein TERM 1343 1253273 - 1253225 - G 84 -8.8 -4.40358 | opp_overlap 1253225, overlap 1253228 1253259 ATGCAGTCCAGAAAA GTACGGAAGCGGCGGTGTTC GTAGTTCGG GAACACCGCCAACTCCGGCC TCGTTCCGGGCGCGG TERM 1344 1253270 - 1253228 - G 76 -13.5 -3.18044 | opp_overlap 1253225, overlap 1253225 1253259 CAGTCCAGAAAAGTA CGGAAGCGGCGGTGTTC GTAGTTCGG GAACACCGCCAACTCCG GCCTCGTTCCGGGCG TERM 1345 1253856 - 1253829 - R 100 -9 -5.49809 | overlap 1253831 1253832 GAAAGCCCAAAAAAA TATCCGGCCCCC GCAA GGGGACCGGGTT CCAACAGACTTATCG TERM 1346 1253854 - 1253831 - R 91 -11.6 -4.36993 | overlap 1253829 1253832 AAGCCCAAAAAAATA TCCGGCCCCC GCAA GGGGACCGGG TTCCAACAGACTTAT TERM 1347 1253853 - 1253832 - R 95 -15.1 -3.20569 | overlap 1253831 1253829 AGCCCAAAAAAATAT CCGGCCCCC GCAA GGGGACCGG GTTCCAACAGACTTA Daud_1201 1254961 - 1253978 - | tryptophanyl-tRNA synthetase TERM 1348 1254288 - 1254312 + g 74 -5.8 -4.49939 | gap 2, opp_overlap 1254241 TTCCGGATGCGCGCC GGGT-CGG-TGA TCA TCATCCGCACCC TTTTCTCGATTATGT Daud_1202 1255658 - 1254984 - | peptidase M50 Daud_1203 1258280 - 1255659 - | CBS domain-containing protein TERM 1349 1257692 - 1257705 + g 93 -2.3 -5.58074 | opp_overlap 1257692 CGGCCGAAATCAAGA GGTCC CGCA GGAGC TTTTTTTGCTCGTTG TERM 1350 1258381 - 1258327 - R 79 -12.9 -2.86656 | gap 2, opp_overlap 1258332 1258336 1258339, overlap 1258339 TATCAAAACACATTA TTATGGCAATTATGGCAGGGGCGCCCG CCG CGGGCGCCCCTGCCCTCATT-CC-TGT TCCGTTCACAAGACA TERM 1351 1258332 - 1258378 + r 100 -25.2 -3.14878 | opp_overlap 1258327 1258339, overlap 1258336 1258339 AAACACATTATTATG GCAATTATGGCAGGGGCGCCCG CCG CGGGCGCCCCTGCCCTCATTCC TGTTCCGTTCACAAG TERM 1352 1258336 - 1258374 + r 100 -24.6 -3.39529 | opp_overlap 1258327 1258339, overlap 1258332 1258339 ACATTATTATGGCAA TTATGGCAGGGGCGCCCG CCG CGGGCGCCCCTGCCCTCA TTCCTGTTCCGTTCA TERM 1353 1258339 - 1258371 + r 100 -26.3 -2.8499 | opp_overlap 1258339 1258327, overlap 1258336 1258332 TTATTATGGCAATTA TGGCAGGGGCGCCCG CCG CGGGCGCCCCTGCCC TCATTCCTGTTCCGT TERM 1354 1258371 - 1258339 - R 100 -26.3 -2.74012 | opp_overlap 1258336 1258332 1258339, overlap 1258327 TTATTATGGCAATTA TGGCAGGGGCGCCCG CCG CGGGCGCCCCTGCCC TCATTCCTGTTCCGT Daud_1204 1259723 - 1258401 - | diaminopimelate decarboxylase TERM 1355 1259430 - 1259417 - G 71 -5.2 -4.41348 | overlap 1259418 TTCCGTGGAAATAAA CCCG GTCCAT CGGG AAACCGGCCTGGACG Daud_1205 1261107 - 1259752 - | pyridoxal-phosphate dependent TrpB-like enzyme TERM 1356 1261295 - 1261325 + r 100 -19.9 -4.57569 | opp_overlap 1261298 TCGTGGATTGACGAT CAAGAGAGCAGGC TTAGC GCCTGCTCTCTTG TTTTTCGGGCGGTAC TERM 1357 1261322 - 1261298 - R 100 -15.8 -3.22298 | opp_overlap 1261295 TGGATTGACGATCAA GAGAGCAGGC TTAGC GCCTGCTCTC TTGTTTTTCGGGCGG Daud_1206 1262203 - 1261472 - | ABC-2 type transporter Daud_1207 1263043 - 1262204 - | daunorubicin resistance ABC transporter ATPase subunit Daud_1208 1264180 - 1263062 - | magnesium chelatase Daud_1209 1266205 - 1264193 - | magnesium chelatase TERM 1358 1264496 - 1264480 - G 70 -7.9 -4.09685 | opp_overlap 1264491 TGGGATCCTTGAAAA GGTGGGC CCG GGCCACC TCGTAGGCTTTTAAG Daud_1210 1269851 - 1266219 - | cobaltochelatase TERM 1359 1267708 - 1267671 - G 70 -7.7 -4.10161 | gap 1, overlap 1267642 1267675 CACCATCCGGTAAAA TGAAGGCACTT-CCCGGT CAA ACCGGACAAGGGCCGCCA GATAGGAAACCAGGT TERM 1360 1268522 - 1268492 - G 100 -14.8 -4.66537 | opp_overlap 1268496, overlap 1268496 CCCCGCAAGATAAAA GAAATTCCCCCAGG TCC CCCGCGGGAATTTC CACCCGGTACCCGGC TERM 1361 1268518 - 1268496 - G 100 -9.8 -4.88163 | opp_overlap 1268496, overlap 1268492 GCAAGATAAAAGAAA TTCCCCCAGG TCC CCCGCGGGAA TTTCCACCCGGTACC TERM 1362 1269195 - 1269185 - G 86 -6.8 -5.07652 | overlap 1269186 CGCCGTAAAAGAAAA TGCC CAC GGCA GGCTTGTTCTCGTCC Daud_1211 1270634 - 1269876 - | ABC-2 type transporter TERM 1363 1270170 - 1270160 - G 74 -2.4 -4.84761 | overlap 1270161 AGAGCCCCAGAAAAA CCCC GAA GGCG CCGCAGGAAAAGGCA TERM 1364 1270218 - 1270182 - G 73 -7.1 -4.25104 | GGCGCCGCAGGAAAA GGCAACCGCCAGAAGCC ATG GGATTCCGTCAGGCGCC GGGCGAAAGCCGGGA TERM 1365 1270580 - 1270570 - G 80 -4.6 -4.81851 | overlap 1270562 AGGTAAAGCCAAAAA CGGC GCC GCCA GTAAACCATCTCCTC Daud_1212 1271413 - 1270634 - | ABC-2 type transporter Daud_1213 1272353 - 1271424 - | ABC transporter related Daud_1214 1273210 - 1272386 - | ABC transporter related TERM 1366 1272759 - 1272739 - G 80 -5.4 -4.9218 | gap 1, overlap 1272740 CATCCAGCAGAAAAA CCTCCGGCT CCTG AGCCAG-GG CACGGGCGATGAGCA Daud_1215 1275639 - 1273285 - | copper amine oxidase domain-containing protein Daud_1216 1277160 - 1275724 - | copper amine oxidase domain-containing protein Daud_1217 1278312 - 1277224 - | transport system permease protein TERM 1367 1277282 - 1277272 - G 72 -2.4 -4.81551 | CAGGTAGATGAAAAA GGGG GAG CCCA TCAGGGCGGTGATAA Daud_1218 1279399 - 1278323 - | periplasmic binding protein Daud_1219 1283302 - 1279445 - | cobaltochelatase TERM 1368 1282216 - 1282235 + g 78 -6.3 -4.65895 | opp_overlap 1282211 1282212, overlap 1282217 GCAGGACGAAGGCCA CCCGGCG TTCGGC CGCCGGC TTTTTCCCTACGCGA TERM 1369 1283373 - 1283346 - R 100 -12.8 -5.5943 | opp_overlap 1283344 AAAGCATTAAAAAAA GACCACAAAGGC GGAA ACCTTCGTGGTC CCTCTTAAACACTTC Daud_1220 1283930 - 1283574 - | SpoVA protein TERM 1370 1283657 - 1283608 - G 100 -4.8 -5.44721 | overlap 1283610 1283621 ACGATGGCAAAAAAA TAGCCGAAAACCACCGCGGCCG TAATGC CGGCCGCCGCCGCTTCCAACCC CCCGGCGAACACCCC TERM 1371 1283655 - 1283610 - G 83 -9.6 -4.36089 | overlap 1283608 1283621 GATGGCAAAAAAATA GCCGAAAACCACCGCGGCCG TAATGC CGGCCGCCGCCGCTTCCAAC CCCCCGGCGAACACC Daud_1221 1284965 - 1283949 - | stage V sporulation AD family protein TERM 1372 1284734 - 1284749 + g 85 -6 -5.00884 | overlap 1284746 AGAAGTCGATTTCCT GCTGGC TAAG GCCCGC TTTTTTCAGGGCGGT Daud_1222 1285439 - 1284978 - | SpoVA protein Daud_1223 1285679 - 1285485 - | hypothetical protein Daud_1224 1286537 - 1285764 - | FliA/WhiG family RNA polymerase sigma factor TERM 1373 1285921 - 1285888 - G 77 -2.3 -5.00616 | gap 1, opp_overlap 1285914, overlap 1285889 TTGTCCTCGAAAAAA CGCCAGACCACGATCC GCC GG-TCCCGCTCCGGCA GGCTGTCCAGGAGTT TERM 1374 1286271 - 1286239 - G 71 -5.6 -4.36914 | gap 2 TCGTCCCGTAGAAAA CGCCGTATCTCCCCGA TAA TCATGG-G-TACGGCG TAGGTGGAAAACTTC Daud_1225 1286967 - 1286521 - | putative anti-sigma regulatory factor, serine/threonine protein kinase Daud_1226 1287318 - 1286983 - | anti-sigma-factor antagonist Daud_1227 1288528 - 1287428 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 1375 1287607 - 1287623 + g 73 -6.5 -4.36914 | ACGGCAGCTCCACGC GGAAGTC GAC GCCTTCC TTTTCTCCCCGGGGC TERM 1376 1289119 - 1289097 - g 76 -5.5 -4.62069 | gap 1, overlap 1289100 CCCGGACCGGAAAAA GACCCGCTGC CGGC GCTGCGG-TC ACTCCTGGTTCAACG Daud_1228 1288885 - 1289181 + | hypothetical protein TERM 1377 1289339 - 1289314 - T 100 -13.3 -4.5442 | opp_overlap 1289307 1289314 TGGTGAATCAGAAAA GCAGGAGGGCC TTGG AACCCTCCTGC TTCGTGTTTCGCGCC TERM 1378 1289314 - 1289339 + T 80 -11.9 -3.45571 | opp_overlap 1289314, overlap 1289307 TGGTGAATCAGAAAA GCAGGAGGG CCTTGGAA CCCTCCTGC TTCGTGTTTCGCGCC Daud_1229 1291393 - 1289372 - | translation elongation factor G TERM 1379 1289881 - 1289858 - G 74 -5.2 -4.57073 | overlap 1289859 1289860 1289874 CACCGCCGGGAAAAA CCCGGCGG GCACCGAA CCGCCGAA CACCTCTTCGTCGAA Daud_1230 1291594 - 1293162 + | polysaccharide biosynthesis protein Daud_1231 1293944 - 1293171 - | stationary-phase survival protein SurE Daud_1232 1294138 - 1293959 - | hypothetical protein Daud_1233 1294718 - 1294158 - | GTP cyclohydrolase I TERM 1380 1294255 - 1294217 - G 83 -7.3 -4.56597 | gap 1, opp_overlap 1294219, overlap 1294219 CGTTGCGCTCAAAAA TACCCCGCACCGCGGACG TCAC CGTCTG-GGCGCCGGGTT TGTTCACGCCGCGCA TERM 1381 1294219 - 1294253 + g 81 -9.9 -4.15044 | gap 1, opp_overlap 1294219 1294217 TTGCGCTCAAAAATA CCCCGCACCGCGGACG TCAC CGTCTG-GGCGCCGGG TTTGTTCACGCCGCG TERM 1382 1294253 - 1294219 - G 76 -9.9 -3.90048 | gap 1, opp_overlap 1294219, overlap 1294217 TTGCGCTCAAAAATA CCCCGCACCGCGGACG TCAC CGTCTG-GGCGCCGGG TTTGTTCACGCCGCG TERM 1383 1294642 - 1294613 - G 77 -15 -2.87683 | opp_overlap 1294619 1294635 ACACCTCGGCATACA TCCGGGCCACCC GGCGCG GGGTGTCCCGGA GCCCCTCCCGGTTCG Daud_1234 1295484 - 1294744 - | radical SAM domain-containing protein Daud_1235 1296044 - 1295481 - | hypothetical protein TERM 1384 1295854 - 1295833 - G 70 -10.2 -3.57971 | AGATCCAGGTCGAAA TGCTCCAC GATGAA GTGGAGCA TGTCCGGACTGTAAA Daud_1236 1296707 - 1296045 - | exsB protein Daud_1237 1297092 - 1296712 - | putative 6-pyruvoyl tetrahydropterin synthase TERM 1385 1296838 - 1296850 + g 75 -3.3 -4.82901 | overlap 1296824 1296823 GTGGCGGGCGATGTT CTCGG CCG TCGGG TTTTTCTCAGGCCCG TERM 1386 1297209 - 1297196 - R 78 -5.9 -4.82518 | opp_overlap 1297196 AAAAGAGCAATAAAA CACCC CAGA GGGCG TTATCGGCTTATATG Daud_1238 1298377 - 1297244 - | TPR repeat-containing protein TERM 1387 1297928 - 1297888 - G 78 -6.5 -4.56597 | overlap 1297890 1297892 1297894 GCGCTTGTTGAAAAA GAGACAGCGCCTCCTGGTC CCG GTCCAGGTGGAGCAGGCAC AGACCCTTATTGTTC Daud_1239 1299232 - 1298501 - | deoxyribose-phosphate aldolase TERM 1388 1298557 - 1298586 + gr 77 -8.4 -4.13767 | TTGTCCCCAGGCGGT CGGCCCCGGCCT CCAGAA GGGCCAGCGCCG TTTTCAGGTCCCGGA TERM 1389 1299095 - 1299077 - GR 71 -10.2 -3.29324 | CGCACCGAAACCGAA CTCCCGCG CTT CGCGGCAG AGGTTGCGCACCTCG Daud_1240 1300118 - 1299198 - | D-alanine--D-alanine ligase TERM 1390 1299382 - 1299367 - GR 77 -8.2 -4.08767 | overlap 1299380 TCCACCCGGGCAAAA CCCCGG CAAC CCAGGG CCCGGTAAGCCCGCA Daud_1241 1301921 - 1300203 - | hypothetical protein TERM 1391 1301603 - 1301591 - G 83 -6.9 -4.86621 | opp_overlap 1301596, overlap 1301599 ACGTGTAACCAAAAA CGGGA ATA CCCCG GGCGTGATCGGGGTG Daud_1242 1302078 - 1303577 + | metallophosphoesterase Daud_1243 1303939 - 1303574 - | hypothetical protein Daud_1244 1304688 - 1303936 - | HhH-GPD family protein TERM 1392 1304576 - 1304560 - G 73 -11.5 -3.62572 | CACGATCACCTCAAA GGCCGAC TCC GCCGGCC ACCAGTGGCGGGGCC Daud_1245 1305195 - 1304812 - | hypothetical protein TERM 1393 1305755 - 1305732 - H 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 1394 1306651 - 1306661 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC TERM 1395 1306702 - 1306691 - g 72 -4.4 -4.62441 | CCCGAGACAAACAAA CATC GCGA GATG GCCTTCGGGGGATTT Daud_1246 1305752 - 1307083 + | transposase, IS4 family protein TERM 1396 1307548 - 1307566 + F 76 -3.1 -5.08824 | overlap 1307539 GTGTACGACGCATTG GGGTCTT AATAG AAGGTCC TTTTTTGGCTAACAC TERM 1397 1307725 - 1307739 + F 73 -5.7 -4.41348 | opp_overlap 1307724 AATAGCCTGATATAG CGTGA AATTC TCACG TTTGTTTCACCGGGC TERM 1398 1307767 - 1307792 + G 100 -17.5 -4.36411 | GGCTGCCAAGCTCAT CCGGCCGCCGG AGCG CCGGCTGCCGG TTTTCATCATTGCTA TERM 1399 1308047 - 1308063 + G 95 -10.1 -4.52347 | GTGGTTGTGCTGGGA GCCCACG CAC TGTGGGC TTTTCGTATTGTTTG Daud_1247 1307741 - 1308079 + | hypothetical protein TERM 1400 1308286 - 1308263 - f 74 -4.4 -4.81814 | overlap 1308264 ACGAGCAGAAGAAAA GCCCGCGCTA CTGA TGGCACGGGA ACGCGAGGGTCTGAA TERM 1401 1308379 - 1308363 - g 72 -4.3 -4.62783 | CATGCAGCCCAAAAA CAGCTTG CTT CAGGCCG CGGAGAAGTGGTATG Daud_1248 1308322 - 1308777 + | hypothetical protein TERM 1402 1308808 - 1308824 + T 77 -7.2 -4.35116 | overlap 1308804 CTGACTCATGCGGCC CGGCCT AACTG GGGCCG TTTTGCTATCCACTG Daud_1249 1310428 - 1308830 - | L-aspartate oxidase TERM 1403 1309193 - 1309219 + g 93 -9.4 -4.68593 | overlap 1309196 GATGCCGAATCGTAT GTACTGCCGG AACATGG CCGGCAGTTC TTTTTCGATGGTCCC TERM 1404 1309196 - 1309216 + g 91 -9.7 -4.4521 | overlap 1309193 GCCGAATCGTATGTA CTGCCGG AACATGG CCGGCAG TTCTTTTTCGATGGT TERM 1405 1310142 - 1310115 - G 86 -18.4 -2.78384 | overlap 1310089 1310086 TCGGCGGCGAGCAGA GCGGCGGCCGTG CCGG CACCGCCGCCGC CGATAACCAGCACAT Daud_1250 1311126 - 1310443 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1406 1311032 - 1311022 - G 71 -8.2 -3.87869 | GCAACCCCGGATAAA CCGG TAA CCGG CGAATTCCATGGCTT Daud_1251 1311997 - 1311149 - | CoB--CoM heterodisulfide reductase Daud_1252 1312490 - 1312008 - | heterodisulfide reductase subunit C-like protein Daud_1253 1313131 - 1312571 - | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit TERM 1407 1313152 - 1313140 - R 71 -4.7 -4.64766 | CGGACATTCCAAAAA CCCTC CTC GCGGG GTCGGCCGTCCCGGA Daud_1254 1314059 - 1313175 - | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit Daud_1255 1316097 - 1314109 - | TRAP transporter, 4TM/12TM fusion protein TERM 1408 1315114 - 1315096 - G 72 -12.4 -3.33361 | opp_overlap 1315095 1315096 GATGAAGTAGAGCAA CGCCGGAA TGA TCCCGGCG ATTATAAGGTGCTGG TERM 1409 1316166 - 1316132 - R 100 -17.9 -3.06796 | gap 1, opp_overlap 1316126 TGGGACTTCAGTTAA GGGGCTCTCGC-CGCC GTGA GGCGGGCGAGAGCCCG CTGCCGTGCTCTCCG Daud_1256 1317284 - 1316250 - | TRAP transporter solute receptor TAXI family protein Daud_1257 1318300 - 1317626 - | response regulator receiver Daud_1258 1318489 - 1319703 + | leucine-rich repeat-containing protein TERM 1410 1320158 - 1320169 + G 81 -7.2 -4.42788 | CAAACTTATCCAGGA CCGG GCCG CCGG TTTTGTCGGGTTCGG TERM 1411 1320627 - 1320605 - g 78 -4.6 -4.73388 | opp_overlap 1320622 AACTTTCATCAAAAA CCCGGCCGTC TTC GCCGCCCTGG ACGTCGACCAGCGTT Daud_1259 1319700 - 1320938 + | AAA ATPase TERM 1412 1321074 - 1321045 - g 79 -8.6 -4.25104 | gap 1 TCTTGTTGAGCAAAA TGCGCATCGCCGT CAGTC ACGCCG-TGCGCA CCGTGCTGGCCACGC Daud_1260 1320951 - 1322198 + | hypothetical protein Daud_1261 1322991 - 1322227 - | YdjC family protein TERM 1413 1323087 - 1323058 - R 100 -26.5 -3.87815 | opp_overlap 1323051, overlap 1323075 GTCTACTCGCACAAA GCGGCACCCGGGG GAAA CCCCGGGTGCCGC GGCAGCCCTTGATGA Daud_1262 1323285 - 1323112 - | hypothetical protein Daud_1263 1323399 - 1324349 + | hypothetical protein TERM 1414 1325474 - 1325487 + G 72 -3.7 -4.57073 | TCCTGCCCTTCACCG GGCAG TTCG CCGCC TTTTTGAACCGGATC Daud_1264 1324585 - 1326261 + | Na/Pi-cotransporter II-related protein Daud_1265 1327343 - 1326258 - | hypothetical protein Daud_1266 1329710 - 1327641 - | GTP-binding protein, HSR1-related TERM 1415 1327915 - 1327879 - G 76 -10 -3.87994 | opp_overlap 1327880 ACCGATCCGGATAAA TCGGCCGCCAGGCCGT TGGTG ATGGCCAGGGAGCCGA TCACGATCTCCTTGG TERM 1416 1328007 - 1327984 - G 81 -10.2 -4.16842 | gap 1, opp_overlap 1327997, overlap 1327985 TCCAGCCCCAAGAAA CGGCCGGCCGG TTC CAGGCCGGC-G CTCATGCGGCCGGTC TERM 1417 1328587 - 1328573 - G 100 -4.2 -6.12328 | ACAATATAAAAAAAA TGGCCA TGG TGGGCA GCATCACCGCGATAA Daud_1267 1329964 - 1329713 - | FeoA family protein Daud_1268 1331121 - 1330156 - | SpoIID/LytB domain-containing protein TERM 1418 1330393 - 1330420 + g 76 -12.6 -3.53012 | opp_overlap 1330374 TCCCGGCACCTCCGC CCGGCCGACCCG GAGG CGGGTCACCCGG TTTGAAGGCCCCCGG TERM 1419 1331078 - 1331095 + g 77 -2.6 -5.01535 | opp_overlap 1331076 AGCACCAAGATCACC GCTCCG ATCGGC CAGAGC TTTTTGTACTTGTCC TERM 1420 1331297 - 1331279 - R 90 -10.3 -4.28254 | CCCCAATATGGAAAA GAACCGG TTCCC CCGGTTC CCACCATAATAAACA Daud_1269 1334826 - 1331461 - | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 1421 1331699 - 1331682 - G 71 -8.3 -3.85817 | opp_overlap 1331686 1331697 ACTTGCCCGGAGAAA GCTGCCG GCCG CGGCCGC GGGCCAGTTGGTAGG TERM 1422 1333284 - 1333305 + g 72 -2.3 -4.79223 | gap 1, overlap 1333284 GGTCGCGATTGCTTT GG-GTCAG GCGGATG CTGACACC TTTTTGCTGCTCTCC TERM 1423 1334581 - 1334558 - G 76 -6.6 -4.4648 | gap 1, opp_overlap 1334565, overlap 1334561 ACGGCCAGCACAAAA CAAGCCCCCGG CTG CCAGGGGCG-G TCGGTTTTCCCGATG TERM 1424 1334579 - 1334561 - G 100 -13.8 -4.35042 | opp_overlap 1334565, overlap 1334558 GCCAGCACAAAACAA GCCCCCGG CTG CCAGGGGC GGTCGGTTTTCCCGA TERM 1425 1334565 - 1334585 + g 89 -12.5 -4.15543 | opp_overlap 1334561 1334558, overlap 1334582 GCACAAAACAAGCCC CCGGCTGCC AGG GGCGGTCGG TTTTCCCGATGTTTG Daud_1270 1335044 - 1336042 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 1426 1336057 - 1336084 + T 95 -14.8 -3.68351 | opp_overlap 1336056 1336055 1336053, overlap 1336055 GGCGCCTAAAATAGG CTGGGGACGGTC TTTC GGCCGTCCCCCG TTTCAGTCGTAAACA Daud_1271 1336353 - 1336087 - | hypothetical protein Daud_1272 1336632 - 1337192 + | ECF subfamily RNA polymerase sigma-24 factor Daud_1273 1337198 - 1338142 + | hypothetical protein Daud_1274 1338374 - 1338150 - | hypothetical protein Daud_1275 1338959 - 1338507 - | hypothetical protein TERM 1427 1338670 - 1338655 - G 74 -6 -4.46212 | overlap 1338657 TCCTCCAGCAGAAAA GCCACG GTCT CGGGGC GATATACCCGCCCGT TERM 1428 1339078 - 1339097 + r 89 -13.6 -3.61536 | opp_overlap 1339078 TCAAGGTTTTTGAAA GACTGGCC TTCG GGCCAGTC TTTCCGCGTTACATT TERM 1429 1339097 - 1339078 - R 89 -13.6 -3.54459 | opp_overlap 1339078 TCAAGGTTTTTGAAA GACTGGCC TTCG GGCCAGTC TTTCCGCGTTACATT Daud_1276 1343015 - 1339323 - | UvrD-like DNA helicase, C terminal TERM 1430 1339977 - 1339942 - G 83 -11.8 -4.07568 | gap 1, opp_overlap 1339950 1339953 GCGGCCGCCGCAAAA CGGCGC-TTGACCTCGG TGG CCGAGATCTTTGCGCCG CAAGAGGCAAGGGCG TERM 1431 1342252 - 1342292 + g 86 -11.6 -4.14392 | GTCCCTTCAACCTCC GCGGCGAGCGCGTCTGCG TAGAC CGCTGGCCCGCCCGGCGC TTTTGCCGCTTCCAG TERM 1432 1342758 - 1342733 - G 74 -12.5 -3.28712 | opp_overlap 1342746 CCGCCTGGGGCAGAA GCCGCAGCTGG TGCT CCAGCAACGGC ATGCCGGGGTGTTTC Daud_1277 1346505 - 1343008 - | UvrD-like DNA helicase, C terminal TERM 1433 1343264 - 1343284 + g 71 -5.3 -4.41633 | overlap 1343275 AGCCGTTCGAGCTGC GCCGCGC TCACGAC GCCCGGC TTCTTTTTCACCGTC TERM 1434 1343527 - 1343491 - G 95 -18.6 -3.51329 | opp_overlap 1343485 TACCCGGAAGTAGAA GGCGCCTGCCGGCCGG CACTC CCGGCCCGCCAGCGCC GCCGCCTCTCTGAGG TERM 1435 1344053 - 1344027 - G 100 -4.2 -5.40072 | overlap 1344029 CGGCGTGGAAAAAAA GCCCGATGTCCG GCG CGGCCAGCCGAC ACACGTCCCGCTCCT TERM 1436 1344253 - 1344213 - G 100 -14 -5.00616 | gap 2, overlap 1344214 GGTTTTCGTAAAAAA GGCCGGCCAGCACGGGAGCG CAC CGCTCCC--GCCAGCCGGCG TGAGCAGCGAACCAG TERM 1437 1344252 - 1344214 - G 100 -17.5 -3.60048 | gap 2, overlap 1344213 GTTTTCGTAAAAAAG GCCGGCCAGCACGGGAGCG CAC CGCTCCC--GCCAGCCGGC GTGAGCAGCGAACCA TERM 1438 1344395 - 1344375 - G 77 -13.9 -3.37344 | opp_overlap 1344386 CCGTGACGTAAGGAA GGTCCGCGC CGG GCGCGGTCC CCTCGGGTTCCAGGG TERM 1439 1345136 - 1345155 + g 74 -15 -2.52676 | GATGGCGCCGGGGCA CCCGTGCC GTTA GGCACGGG TCGGTTCAGCGCGTC TERM 1440 1345579 - 1345600 + g 75 -4.3 -4.72272 | CGCAACCAGGCGCAA GTTCTCCGG CGGG CCGGCAAAC TTTTTGGTAGGGCGG TERM 1441 1346424 - 1346400 - G 75 -3.4 -4.9218 | opp_overlap 1346402, overlap 1346403 1346405 CAGGCACGAGAAAAA CAAGCGGCGG CCCGT CGGGCGCCTG CCGCAGTTCTTTCCG TERM 1442 1346428 - 1346403 - G 91 -9 -4.56153 | gap 2, opp_overlap 1346402, overlap 1346400 1346405 GCACGAGAAAAACAA GCGGC-GGC-CC GTCG GGCGCCTGCCGC AGTTCTTTCCGGATC Daud_1278 1348669 - 1346582 - | metallophosphoesterase TERM 1443 1347193 - 1347209 + g 70 -7.2 -4.07568 | CCGGGTCTGCGCCCC CGCCGC CCGCC GCGGTG TTTTCCCGGGCCGCC TERM 1444 1347447 - 1347398 - G 100 -12.7 -4.56597 | gap 1, opp_overlap 1347415 TCCGGCCGGCAAAAA CCGCG-CACCCGCCGGCACCGC GCTTCCG GGGGCGCCGTCCGGCGCCGCGG CCAGCCGGTGTTCCC TERM 1445 1347597 - 1347559 - G 71 -5.2 -4.52589 | gap 1, opp_overlap 1347570 GCTCGCGACACAAAA GCCAGCGC-AACGCCCG GACGAT CGCGCTTTTGCCCTGGC CGGACTCGCCCAGGA TERM 1446 1347897 - 1347847 - G 73 -8.7 -4.09739 | gap 1, overlap 1347848 CGAACCGCCCGAAAA CGGTCCCCGGCCCGTCGCGTCCCG CTGC CGCGGCG-GCCAGGCCGGCGTCCA GCACCTCATGACCGG TERM 1447 1347996 - 1347966 - G 76 -9.1 -4.07568 | gap 2 CGGCTGCCGGTAAAA TCCAGCAGCAGCACC TGC GGCG-TGC-GCTGGA TGTCGCCGGGCTGGA TERM 1448 1348304 - 1348274 - G 100 -18.3 -3.77666 | CATATTGAAGTGAAA GGGGGTGCCCGTC AGCTG GACGCGCACCCCC CGCGACTCCAGGTAC TERM 1449 1348543 - 1348517 - G 78 -6.4 -4.56597 | CGGCTGGTCGAAAAA GTCCCCGCCGTG CAG CACTGCGTCGAC CTCCAGGGCGCGGAC Daud_1279 1349873 - 1348779 - | 3-isopropylmalate dehydrogenase Daud_1280 1351179 - 1349854 - | pyrimidine-nucleoside phosphorylase TERM 1450 1350063 - 1350079 + g 73 -3.6 -4.72272 | overlap 1350059 CCACCCCGACCGCCG GGTCGA CGGGC TCGCCC TTTTTCGTGCGCCCG Daud_1281 1352375 - 1351182 - | phosphopentomutase TERM 1451 1351316 - 1351360 + g 72 -13.4 -2.80816 | gap 1 CCAGGTCCACCCCGC CGCGCAGGCGCG-GCCCCAGC GCCA GCAGGGGCACGTACTCGCGCG TGTGGTCGGTGCCGG Daud_1282 1353280 - 1352393 - | tyrosine recombinase XerD TERM 1452 1353360 - 1353335 - R 100 -9.7 -6.09888 | opp_overlap 1353334, overlap 1353337 CCCCAACAAAAAAAA TCCTACCAGGG ATTC CCCCGGTAGTA GTCCTTGAGCCAATC TERM 1453 1353358 - 1353337 - R 76 -12.3 -3.12957 | opp_overlap 1353334, overlap 1353335 CCAACAAAAAAAATC CTACCAGGG ATTC CCCCGGTAG TAGTCCTTGAGCCAA Daud_1283 1353564 - 1353337 - | hypothetical protein TERM 1454 1353446 - 1353394 - G 80 -14.6 -3.14344 | gap 1, opp_overlap 1353423 CATCTGTTCCAGGAA GCCCCCCGCC-CCCGCCGGCCCCGC CGTC ACCGGGCCTGCGGGCGGCGCGGCCC CGGTTTTGAACACCC TERM 1455 1353423 - 1353449 + g 86 -12.9 -4.07687 | opp_overlap 1353394 CCGGCCCCGCCGTCA CCGGGCCTGCG GGCGG CGCGGCCCCGG TTTTGAACACCCCGT Daud_1284 1354212 - 1353583 - | required for dissolution of the septal cell wall; RBL05740 Daud_1285 1355383 - 1354280 - | hypothetical protein TERM 1456 1356773 - 1356789 + r 74 -6.5 -4.26903 | ATTTGAGTGCCGACT GGGAACT TTC AGTCCCC TTTTCGTCGGGTCGG TERM 1457 1358885 - 1358900 + r 72 -11.8 -2.60723 | opp_overlap 1358883 1358882, overlap 1358884 1358888 CGGTCGCTGAAACGC GCCGGC AATC GCCGGC CTTACTTGCAGGTGC TERM 1458 1359035 - 1359060 + r 81 -11.7 -3.57239 | opp_overlap 1359028 1359029 CGCTGAAACCGTCCA GGGCGGCCTCG AAAA CCTGGCCGCCC TTCTCATCTTTCAGT TERM 1459 1359571 - 1359559 - R 73 -5.5 -4.58395 | TCCATTTTCGAAAAA CTACC CAT GGCAG GCTGCATAACAATGA Daud_1286 1360494 - 1359559 - | CRISPR-associated RAMP Csa1 family protein Daud_1287 1361090 - 1360518 - | CRISPR-associated Cas4 family protein Daud_1288 1361407 - 1361087 - | CRISPR-associated Cas2 family protein Daud_1289 1362416 - 1361496 - | CRISPR-associated Cas1 family protein Daud_1290 1365268 - 1362881 - | CRISPR-associated helicase Cas3 TERM 1460 1363257 - 1363272 + gr 77 -7.6 -4.30014 | CCGCTGTATACGGCA TCCAAC AGAA GTTGGA TTTTGGCTTCATCCA TERM 1461 1364395 - 1364421 + gr 74 -10 -3.73775 | opp_overlap 1364395 1364394 GGGCTACCAGAACAG CGCACCCCGGCG TCT CGCTGGCGTGGG TTTGATGGGCATAGA Daud_1291 1366010 - 1365243 - | CRISPR-associated Cas5 family protein Daud_1292 1367074 - 1366007 - | CRISPR-associated autoregulator DevR family protein protein TERM 1462 1366401 - 1366411 + g 81 -6.8 -4.7629 | ACTAGAGTAGACACG CGCT GGC AGCG TTTTTCAATTGGTAA Daud_1293 1368652 - 1367096 - | hypothetical protein Daud_1294 1369975 - 1368965 - | regulatory protein, DeoR TERM 1463 1370170 - 1370138 - R 80 -9.7 -3.97947 | opp_overlap 1370132 1370139 1370139 1370142, overlap 1370139 TGCACTCATGATAAA CGCTGACCCCGCCAA ATA CTGGCGGGGTCTGAC TTGTGCCTTTATTCT TERM 1464 1370139 - 1370169 + r 76 -12.5 -2.70617 | opp_overlap 1370138 1370139, overlap 1370139 1370132 1370142 GCACTCATGATAAAC GCTGACCCCGCCA AATAC TGGCGGGGTCTGA CTTGTGCCTTTATTC TERM 1465 1370169 - 1370139 - R 81 -13.2 -2.98447 | opp_overlap 1370139 1370139 1370132 1370142, overlap 1370138 GCACTCATGATAAAC GCTGACCCCGCCAA ATA CTGGCGGGGTCTGA CTTGTGCCTTTATTC TERM 1466 1370139 - 1370170 + r 81 -12.3 -3.52836 | gap 1, opp_overlap 1370138 1370139, overlap 1370132 1370139 1370142 GCACTCATGATAAAC G-CTGACCCCGCCA AATAC TGGCGGGGTCTGAC TTGTGCCTTTATTCT TERM 1467 1370142 - 1370166 + r 90 -17.2 -2.62316 | opp_overlap 1370139 1370138, overlap 1370139 1370139 1370132 CTCATGATAAACGCT GACCCCGCCA AATAC TGGCGGGGTC TGACTTGTGCCTTTA Daud_1295 1371174 - 1370179 - | hypothetical protein Daud_1296 1371925 - 1371158 - | hypothetical protein TERM 1468 1371449 - 1371463 + g 74 -5.6 -4.52589 | overlap 1371418 GTCGAGGAGCGCGAG CACGGC CAT GGCGTG TTTTCTCTCGGCCAG TERM 1469 1371943 - 1371957 + H 81 -8.6 -4.37092 | GCGCTCCCGTTCTTA CTATCC AAT GGATAG TTTTGTACGCGACCT TERM 1470 1372014 - 1372025 + H 74 -2.2 -5.08824 | gap 1, overlap 1372013 1372014 CCCGTTTCCCCTGTG C-GCC GCG GGCCG TTTTTTGGGTGCCGC TERM 1471 1372034 - 1372078 + H 73 -10.7 -3.31365 | gap 3, overlap 1372032 1372037 CGGGCCGTTTTTTGG GTGCCG--CCCCGGCCCCCGGG GCTT CCCGGGG-CCGGGGAACGGTGA TATTGTGGTATACTG TERM 1472 1372037 - 1372075 + H 90 -16.8 -2.82586 | gap 3, overlap 1372034 1372032 GCCGTTTTTTGGGTG CCG--CCCCGGCCCCCGGG GCTT CCCGGGG-CCGGGGAACGG TGATATTGTGGTATA TERM 1473 1372503 - 1372479 - g 81 -4.2 -4.98531 | GCGGGAAAGCAAAAA GCTCCTGATC GCCGA GATCATGGGC CGCCACAGCAACCTG TERM 1474 1373034 - 1373050 + G 70 -7.9 -4.08394 | CGGCGAGCGGGTGAA GGGCCTC CGC GAGGGCC TTTTCGGCGCGGTGT TERM 1475 1373513 - 1373472 - g 77 -13.5 -3.29144 | overlap 1373443 1373496 CTATCTCCGTGACAA GGCCGGGGCCAGGCGGCCC AGGA AGGCGGCGGAACCCCGGCC CCTGGAACTGCAGAC Daud_1297 1372132 - 1373892 + | fibronectin-binding A domain-containing protein Daud_1298 1374826 - 1374119 - | hypothetical protein Daud_1299 1375679 - 1374930 - | orotidine 5'-phosphate decarboxylase TERM 1476 1375694 - 1375721 + r 71 -7.6 -4.07124 | gap 1, overlap 1375697 CTGCTTTCAACCTCC CG-TCCGGTGGGC GGC GCCCACCAGTTCG TTTATGTCCCTGATC TERM 1477 1375697 - 1375717 + r 86 -12.5 -3.65696 | overlap 1375694 CTTTCAACCTCCCGT CCGGTGGGC GGC GCCCACCAG TTCGTTTATGTCCCT Daud_1300 1376608 - 1375685 - | dihydroorotate dehydrogenase family protein Daud_1301 1377417 - 1376605 - | oxidoreductase FAD-binding subunit TERM 1478 1377072 - 1377046 - G 73 -2.9 -4.72272 | gap 1, overlap 1377048 GCGGGCCAGGAAAAA GAGCGGGGCGAT GCCG ATGCCCCCGC-C GACTACGGCCACGCG TERM 1479 1377133 - 1377113 - G 100 -16.1 -4.08216 | opp_overlap 1377097 1377096 1377123 GCAGGCGGGTCAAAA CCCCGGCCC AGC GGGCCGAGG ACGTTCACGCGCCCG TERM 1480 1377123 - 1377154 + g 78 -3.4 -4.96848 | opp_overlap 1377113, overlap 1377097 1377096 CAAAACCCCGGCCCA GCGGGCCGAGGACG TTCA CGCGCCCGCCCTGC TTTTTCTGTGCCAAA TERM 1481 1377222 - 1377171 - G 70 -7.2 -4.07568 | gap 2 TTTTCTGTGCCAAAA GCGCGGTGCCGCGGCCGACCACCC GGTAAA GGATGGT-GACCGTGCC-CCGCTC CCGGTCGGCGTCGTG TERM 1482 1377322 - 1377298 - G 80 -15 -3.15544 | gap 1, opp_overlap 1377298 1377299 GCGCACGTGCAGGAA CTGCCCGGGCC TGAC GGCCCGGGC-G ATTTCCGGGGCCGCG TERM 1483 1377298 - 1377323 + g 79 -13.9 -3.53012 | opp_overlap 1377298, overlap 1377299 GCGCACGTGCAGGAA CTGCCCGGGCC TGAC GGCCCGGGCGA TTTCCGGGGCCGCGA TERM 1484 1377299 - 1377322 + g 84 -17.4 -2.71712 | opp_overlap 1377298, overlap 1377298 CGCACGTGCAGGAAC TGCCCGGGCC TGAC GGCCCGGGCG ATTTCCGGGGCCGCG Daud_1302 1380995 - 1377747 - | carbamoyl-phosphate synthase, large subunit TERM 1485 1380473 - 1380450 - G 83 -11.6 -4.08767 | TTCATCCTCGGAAAA GGCGACCCCG CCCC CGGTGCCGCC CAAGGTGTAAGCCGG Daud_1303 1382075 - 1380996 - | carbamoyl-phosphate synthase, small subunit Daud_1304 1383449 - 1382160 - | dihydroorotase, multifunctional complex type TERM 1486 1383024 - 1383006 - G 90 -13.8 -4.07568 | GCCGTCGTCCGAAAA GGCCACCG CCC CGGCGGCC CGCAAGGCGCCCATT TERM 1487 1383100 - 1383117 + g 73 -8.3 -4.08216 | overlap 1383101 GGGTAGACCCGCGCT CGCCCGG CCTC CCGGGCC TTTTCCAGCACGTAC Daud_1305 1384369 - 1383449 - | aspartate carbamoyltransferase TERM 1488 1384414 - 1384393 - R 100 -15.9 -4.27316 | opp_overlap 1384388 CCCCCTAACTGAAAA GGCCTCTCC GCGT GGAGAGGCC GGCACTTTCTGGCAC Daud_1306 1385044 - 1384490 - | Uracil phosphoribosyltransferase TERM 1489 1385096 - 1385070 - R 100 -8.7 -5.08824 | CCCCGATGCAAAAAA CCTACCCGCCA CCTGT CGGCAAGTAGG CATAGTCCACCCGCG Daud_1307 1385507 - 1385244 - | hypothetical protein TERM 1490 1386732 - 1386768 + G 72 -12.2 -3.38604 | gap 1, overlap 1386725 1386735 1386738 GAGACCGATGAGTTG GATTGTGGCCGGCGGCG CAAT CGCCGCCGGCGTCG-TC TTCCTGATTTTCGTC TERM 1491 1386735 - 1386766 + G 80 -15 -3.25111 | overlap 1386732 1386725 1386738 ACCGATGAGTTGGAT TGTGGCCGGCGGCG CAAT CGCCGCCGGCGTCG TCTTCCTGATTTTCG TERM 1492 1386738 - 1386763 + G 84 -17.5 -2.7961 | overlap 1386735 1386732 1386725 GATGAGTTGGATTGT GGCCGGCGGCG CAAT CGCCGCCGGCG TCGTCTTCCTGATTT Daud_1308 1385608 - 1386822 + | major facilitator transporter TERM 1493 1387045 - 1387012 - g 93 -14.6 -4.05714 | AGGCCGAAGCAGAAA GCCCAGGACCAGGG GCCTGA CCATGGTCCTGGAC AAGGGCTTGGGACTC TERM 1494 1387528 - 1387547 + G 80 -4.9 -4.8667 | overlap 1387530 CGGCAACGGCCGCGT GCGCGAG GAGCTA CTCGCCC TTTTTCTGGAATGTG Daud_1309 1386959 - 1387747 + | phosphosulfolactate synthase TERM 1495 1387907 - 1387923 + G 75 -12.3 -3.67976 | opp_overlap 1387903, overlap 1387906 TTGTTCATCAAGCTG GCCAGGT TTG ACCTGGC TTTCAACTTCCTGGA TERM 1496 1388177 - 1388227 + G 83 -15.5 -3.23009 | gap 1, overlap 1388179 TTCGGGATCCTTTTC CTGGGCGGC-ATGCCGGTGG GGCCCCTGATGG CCGCCGGCATCGCCGCCCTG TTCATGGAGTTTTTC TERM 1497 1388179 - 1388225 + G 86 -16.7 -3.16689 | gap 1, overlap 1388177 CGGGATCCTTTTCCT GGGCGGC-ATGCCGGTGG GGCCCCTGATGG CCGCCGGCATCGCCGCCC TGTTCATGGAGTTTT Daud_1310 1387799 - 1388257 + | hypothetical protein Daud_1311 1389236 - 1388328 - | cysteine synthase TERM 1498 1389577 - 1389521 - R 72 -12.2 -2.78715 | gap 1, opp_overlap 1389524 AACCCCGTGACCACA CCTCCGGAGCCGGATGGCGGGCCGG TTCGGTGT CCAAGCCGGC-TCCGGCCCCGCAGG GAGCGGGCTAATGCA Daud_1312 1390408 - 1389806 - | cobalbumin biosynthesis enzyme Daud_1313 1391169 - 1390411 - | cobalamin 5'-phosphate synthase Daud_1314 1392223 - 1391162 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase TERM 1499 1391817 - 1391832 + g 91 -3.2 -5.42259 | overlap 1391819 1391821 CCAACGGCCATGTTT TTGCTG CCGG CGGCGA TTTTTTTCGAAATAA Daud_1315 1393137 - 1392334 - | ABC transporter related Daud_1316 1394150 - 1393134 - | transport system permease protein TERM 1500 1393723 - 1393709 - G 74 -5.6 -4.52781 | overlap 1393710 GAATTAGAACGAAAA CCGGCA GTT TGCCGT TAACCCGGGCTAGTT Daud_1317 1395084 - 1394161 - | periplasmic binding protein TERM 1501 1395144 - 1395126 - R 71 -6 -4.36903 | opp_overlap 1395133 1395133, overlap 1395133 TTCACCAAACATAAA CAAGAAAC CCC GTCTCCTG ACAAGACCGGGGTTT TERM 1502 1395155 - 1395133 - R 73 -5.5 -4.66814 | opp_overlap 1395133 1395133, overlap 1395126 AACATAAACAAGAAA CCCCGTCTC CTGAC AAGACCGGG GTTTTCAAGGTCAGC TERM 1503 1395349 - 1395368 + r 73 -5.6 -4.59773 | overlap 1395347 GTGGCGGGGCCGTCC GGGATTCG CACC CGGTTCCC TTTTTCACCCTGCGC Daud_1318 1396068 - 1395424 - | hypothetical protein TERM 1504 1396002 - 1396025 + g 72 -13.8 -2.73875 | overlap 1395999 GCGGCAGTCCGGTTT CCCTGGCCAG CGCC CCGGCCAGGG TGGTCTTGCCCACCC TERM 1505 1397014 - 1396988 - g 70 -7.9 -4.07568 | opp_overlap 1396999 CGGGTTGCTGGAAAA GCTCCTGCTGA CCGGT TCAGCCGGTGC TCTCGGCGGCATCGT Daud_1320 1396653 - 1397051 + | hypothetical protein TERM 1506 1397099 - 1397087 - T 100 -10.5 -4.87318 | opp_overlap 1397087, overlap 1397081 GTCAAAAGGTAAAAA GGGGC CAG GCCCC TTTTTTAAATATTAG TERM 1507 1397087 - 1397099 + T 100 -10.5 -5.1615 | opp_overlap 1397081 1397087 GTCAAAAGGTAAAAA GGGGC CAG GCCCC TTTTTTAAATATTAG Daud_1321 1398307 - 1397111 - | peptidase M24 TERM 1508 1397569 - 1397587 + g 72 -8 -4.15044 | GGTAGTCCACCACCA CCGGCTCG TTG CGGGCCAG TTTCTTGAAGGAGGC TERM 1509 1398416 - 1398391 - R 100 -21.9 -4.4261 | opp_overlap 1398380 1398393 1398411 TTGTCAATACGAAAA GACGGCCGCCC CCCG GGGCGGCCGTC CTGTGCACGGCTTTG TERM 1510 1398393 - 1398414 + r 100 -18.7 -2.62515 | opp_overlap 1398391, overlap 1398380 1398411 GTCAATACGAAAAGA CGGCCGCCC CCCG GGGCGGCCG TCCTGTGCACGGCTT Daud_1322 1399948 - 1398446 - | glycogen/starch synthase, ADP-glucose type TERM 1511 1399698 - 1399724 + g 75 -2.9 -4.82901 | gap 1, overlap 1399699 AACTGAGCCTCGATT TCACGCTGGCGG ATGA TCGCCT-CGTGG TTTTTGTCCGCGAAC Daud_1323 1400996 - 1399941 - | galactose-1-phosphate uridylyltransferase TERM 1512 1400926 - 1400938 + g 70 -10.5 -3.65351 | CAGCGGAAATCGTGG GGGCG CTT CGCCC TTTCCGTGGCGATGA Daud_1324 1401161 - 1401784 + | septum site-determining protein MinC Daud_1325 1402368 - 1401835 - | NUDIX hydrolase TERM 1513 1403009 - 1402990 - g 82 -15 -3.34517 | overlap 1402988 AGCGCTCCGGAAATA CGGCACCG GAAG CGGTGCCG CCCGTCTGGTAAGCG Daud_1326 1402790 - 1403944 + | 8-amino-7-oxononanoate synthase TERM 1514 1404530 - 1404511 - g 71 -8.6 -3.96148 | gap 1, opp_overlap 1404512, overlap 1404512 CGGCGTCATCATAAA CCGGTATCC GGT GGAT-CCGG ACCCCGTGGTTAAAG Daud_1327 1403951 - 1404742 + | dethiobiotin synthase TERM 1515 1404763 - 1404788 + G 74 -12.7 -3.32698 | gap 1, opp_overlap 1404761, overlap 1404761 ACCTCTGAAGAGATC GCACGGCTCAAG GAA CTTGA-CCGTGC TCTTATCTGGCATCC TERM 1516 1405866 - 1405877 + G 81 -7.2 -4.4648 | GCACGTGGGCGACAT CCGG CAGG CCGG TTTTATGGTGGGCGT Daud_1328 1404742 - 1406103 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase Daud_1329 1406100 - 1406771 + | hypothetical protein Daud_1330 1406772 - 1407518 + | methyltransferase type 11 Daud_1331 1407515 - 1408501 + | biotin synthase Daud_1333 1408932 - 1409360 + | heat shock protein Hsp20 Daud_1334 1409439 - 1409945 + | hypothetical protein Daud_1335 1409960 - 1410484 + | hypothetical protein Daud_1336 1410805 - 1410581 - | hypothetical protein TERM 1517 1410950 - 1410966 + r 75 -5.7 -4.54449 | opp_overlap 1410951 1410952, overlap 1410952 ATCCGATCCGGAAAA AGGGGGC CTA GCCCCTA TTTTGTGTCCCCTGT TERM 1518 1410965 - 1410951 - R 78 -7 -4.59773 | opp_overlap 1410950 1410952, overlap 1410952 TCCGATCCGGAAAAA GGGGGC CTA GCCCCT ATTTTGTGTCCCCTG TERM 1519 1410952 - 1410964 + r 80 -10.5 -3.88029 | opp_overlap 1410952 1410951, overlap 1410950 CCGATCCGGAAAAAG GGGGC CTA GCCCC TATTTTGTGTCCCCT TERM 1520 1410964 - 1410952 - R 73 -10.5 -3.35542 | opp_overlap 1410950 1410952, overlap 1410951 CCGATCCGGAAAAAG GGGGC CTA GCCCC TATTTTGTGTCCCCT Daud_1337 1412756 - 1410984 - | hydrogenase, Fe-only Daud_1338 1414488 - 1412770 - | NADH dehydrogenase (quinone) Daud_1339 1414977 - 1414510 - | NADH dehydrogenase (ubiquinone), 24 kDa subunit TERM 1521 1415119 - 1415102 - R 81 -2.5 -5.41746 | overlap 1415090 1415089 1415103 1415104 AACCGGCCAAAAAAA GGCCGCC GGGA GGCGCTC GAAATGCCGGCGGAT Daud_1340 1416467 - 1415169 - | glutamate-1-semialdehyde-2,1-aminomutase Daud_1341 1416983 - 1416516 - | AsnC family transcriptional regulator Daud_1342 1417446 - 1416973 - | AsnC family transcriptional regulator Daud_1343 1418440 - 1417436 - | radical SAM domain-containing protein TERM 1522 1417737 - 1417749 + g 76 -6.2 -4.56775 | CCGGCCAGGCAGCCG CGCG TGAAC CGCG TTTTTGCCCCGAGCT Daud_1344 1419411 - 1418443 - | porphobilinogen synthase TERM 1523 1418994 - 1419016 + g 70 -7.6 -4.07568 | overlap 1418988 1418995 CCAGGAGTTCCACCG AGGGGTCGTT CAG GACGGCCCCG TTTTCCACCAGCCCG TERM 1524 1419431 - 1419443 + r 86 -6.9 -5.00138 | opp_overlap 1419431, overlap 1419425 ACCCACCTCCAAAAA GGGGT CAG GCCCC TTTTTACTTTCCCTG TERM 1525 1419443 - 1419431 - R 75 -6.2 -4.60041 | opp_overlap 1419425 1419431 ACCCACCTCCAAAAA GGGG TCAGG CCCC TTTTTACTTTCCCTG TERM 1526 1419497 - 1419509 + r 81 -6.9 -4.72127 | overlap 1419498 GTTGCTTTTGCATGA GCGGC AAA GTCGC TTTTCTGTCTTCTCT TERM 1527 1419791 - 1419762 - R 83 -10.9 -4.05026 | gap 1, opp_overlap 1419770, overlap 1419770 TTGAAAGTCAAAGAA GGT-AAAAAGGGGC CTG ACCCCTTTTTCACC CGGGTTGGATCTCGG TERM 1528 1419770 - 1419782 + r 75 -6.2 -4.57341 | opp_overlap 1419770 1419762 CAAAGAAGGTAAAAA GGGG CCTGA CCCC TTTTTCACCCGGGTT TERM 1529 1419782 - 1419770 - R 85 -6.9 -4.8384 | opp_overlap 1419770, overlap 1419762 CAAAGAAGGTAAAAA GGGGC CTG ACCCC TTTTTCACCCGGGTT Daud_1345 1420971 - 1419787 - | radical SAM domain-containing protein TERM 1530 1419902 - 1419940 + g 83 -7.9 -4.56597 | gap 1, overlap 1419904 CAGATTTCCAGCCAG CGGCAGGCCGC-GCAGCG GCCG CGCAGGAGCGGCCGGCGG TTTTTCAGCCCGGCC Daud_1346 1422484 - 1420949 - | uroporphyrin-III C-methyltransferase TERM 1531 1421131 - 1421109 - G 72 -7.7 -4.1552 | gap 1 GACCGGGCTAACAAA CTGGGGA-GG TCTT CCGCCCCCAG GGCGCCCACGAAATT TERM 1532 1421723 - 1421735 + g 71 -6.2 -4.25104 | GACCAGAATCCGCCG GCCG AAGAG CGGC TTTTGCTCGAACCAG TERM 1533 1422224 - 1422205 - G 70 -7.8 -4.07568 | opp_overlap 1422209 1422209, overlap 1422209 CGCCGCGGCCGAAAA CGAAGGGG TCAC CCCCTTTG AGCCGGGCCACCGTC Daud_1347 1423429 - 1422500 - | porphobilinogen deaminase TERM 1534 1422585 - 1422605 + g 71 -12.5 -3.01712 | TTGCCGAGAGCCTCC GGCCGGTCC GCC GGACCGGAC TCTTGGGCCCGCACC TERM 1535 1423298 - 1423311 + g 71 -8.1 -3.90112 | TTCCAGGATATTATC TCCGG TGGT CCGGA TTTCCTTGCGCACGA Daud_1348 1424769 - 1423429 - | shikimate/quinate 5-dehydrogenase TERM 1536 1423974 - 1423951 - GR 88 -4.4 -5.252 | gap 1, overlap 1423953 1423954 GATGTCGATAAAAAA GATG-GCGCGG CCT CCGCGCTCGGC CAGAACGGACGTCAT TERM 1537 1423971 - 1423953 - GR 71 -5.8 -4.25873 | overlap 1423951 1423954 TGTCGATAAAAAAGA TGGCGCGG CCT CCGCGCTC GGCCAGAACGGACGT Daud_1349 1425385 - 1424744 - | siroheme synthase Daud_1350 1426423 - 1425467 - | trans-hexaprenyltranstransferase TERM 1538 1425735 - 1425772 + g 76 -10 -3.96148 | gap 3, overlap 1425735 GGGAGCGTGATGATG C-CCTGGCGCAAGTCC-CC CCC GGTGGGCTTGC-CCAGGCG TTTCTGGTCGGCCAC Daud_1351 1427239 - 1426601 - | TraR/DksA family transcriptional regulator Daud_1352 1427618 - 1427316 - | hypothetical protein Daud_1353 1429177 - 1427819 - | hypothetical protein TERM 1539 1428642 - 1428663 + g 91 -9.4 -4.49556 | gap 1, overlap 1428641 CACCCGATCGCACTG CGGTCGGCC GTGCG GGCCG-CCG TTTCTTTGATGACCG TERM 1540 1429213 - 1429200 - R 84 -3.1 -5.40474 | gap 1, opp_overlap 1429204 1429206, overlap 1429201 ACTTCCTTAAAAAAA TGCAGC CTA GC-GCA CGCCGCCGGTCGACC Daud_1354 1429529 - 1429248 - | ACT domain-containing protein TERM 1541 1429595 - 1429553 - R 73 -10.5 -3.34398 | gap 1, overlap 1429551 1429555 1429556 GTCCCCTCCTAAACA CAGGTGCCCGCCCGCGATCC CGCC GGAT-GCGGCCGGGCACAAA CAATGCTCAAGCCTT TERM 1542 1429593 - 1429555 - R 95 -15.3 -3.24232 | gap 1, overlap 1429553 1429551 1429556 CCCCTCCTAAACACA GGTGCCCGCCCGCGATCC CGCC GGAT-GCGGCCGGGCACA AACAATGCTCAAGCC TERM 1543 1429592 - 1429556 - R 100 -18.8 -2.54325 | gap 1, overlap 1429555 1429553 1429551 CCCTCCTAAACACAG GTGCCCGCCCGCGATCC CGCC GGAT-GCGGCCGGGCAC AAACAATGCTCAAGC Daud_1355 1430512 - 1429631 - | protein-export membrane protein SecF TERM 1544 1430576 - 1430596 + r 93 -11.1 -4.41895 | opp_overlap 1430580 CGTCTCAATTCCCCT GAAACCGCC CCC GGCGGCTTC TTTTCCTTCCAACTT TERM 1545 1430592 - 1430580 - R 74 -10.5 -3.54459 | opp_overlap 1430576 TCAATTCCCCTGAAA CCGCC CCC GGCGG CTTCTTTTCCTTCCA Daud_1356 1431858 - 1430626 - | protein-export membrane protein SecD TERM 1546 1431597 - 1431619 + g 71 -11.3 -3.46824 | overlap 1431589 CCTGCTGCTGGATCA CCGGTTCGG TCACC CCGAACTGG TTGATTCGTTCCTCA Daud_1357 1432533 - 1431874 - | metal dependent phosphohydrolase Daud_1358 1432831 - 1432559 - | preprotein translocase, YajC subunit Daud_1359 1434035 - 1432917 - | queuine tRNA-ribosyltransferase TERM 1547 1434052 - 1434064 + r 76 -10.5 -3.72893 | opp_overlap 1434052 1434054, overlap 1434055 AAACCACCTCAAAAA GGGGC CTG GCCCC TTTGGTGGCAGCCTG TERM 1548 1434064 - 1434052 - R 95 -10.5 -4.652 | opp_overlap 1434052 1434055, overlap 1434054 AAACCACCTCAAAAA GGGGC CTG GCCCC TTTGGTGGCAGCCTG Daud_1360 1434330 - 1434106 - | hypothetical protein Daud_1361 1434896 - 1434330 - | hypothetical protein TERM 1549 1434578 - 1434564 - G 73 -8.5 -4.08692 | overlap 1434574 CAACGTGGTCGAAAA GGCCG CAAAC CGGCC CCGCACCGCCACCCG Daud_1362 1435945 - 1434911 - | Holliday junction DNA helicase RuvB Daud_1363 1436556 - 1435948 - | Holliday junction DNA helicase RuvA Daud_1364 1437041 - 1436553 - | crossover junction endodeoxyribonuclease RuvC Daud_1365 1437666 - 1437079 - | hypothetical protein TERM 1550 1437781 - 1437765 - R 70 -5.1 -4.48176 | opp_overlap 1437770 CAGAAAATTAAGAAA GGACC GCTTAAG GGTCC TTCAGCCTTTGAATT TERM 1551 1437837 - 1437851 + r 73 -9.2 -3.89614 | CTAAAACGGAGGCAC CGCGGG CAT CTCGCG TTTGTGCCGGTTGCG Daud_1366 1438547 - 1437822 - | NAD+ synthetase TERM 1552 1438785 - 1438796 + r 71 -5.8 -4.32034 | TACCGTGTAGTTCGA CTCC GGCC GGAG TTTTCCTGCTCCTAA TERM 1553 1438961 - 1438999 + r 100 -18.3 -4.18018 | gap 1, opp_overlap 1438962 1438963 1438965 1438968, overlap 1438963 1438965 TCACTTTCAGCGATA AG-GAGAAGACCCCGGCT TTTT AGCCGGGGTCTTCTCTCA TTTTAGCTCCGGCGG TERM 1554 1438997 - 1438962 - R 100 -22 -3.35996 | opp_overlap 1438961 1438963 1438965, overlap 1438963 1438965 1438968 CACTTTCAGCGATAA GGAGAAGACCCCGGCT TTTT AGCCGGGGTCTTCTCT CATTTTAGCTCCGGC TERM 1555 1438996 - 1438963 - R 100 -25.5 -2.61383 | opp_overlap 1438961 1438963 1438965, overlap 1438962 1438965 1438968 ACTTTCAGCGATAAG GAGAAGACCCCGGCT TTTT AGCCGGGGTCTTCTC TCATTTTAGCTCCGG TERM 1556 1438963 - 1438996 + r 100 -25.5 -3.11208 | opp_overlap 1438963 1438962 1438965 1438968, overlap 1438961 1438965 ACTTTCAGCGATAAG GAGAAGACCCCGGCT TTTT AGCCGGGGTCTTCTC TCATTTTAGCTCCGG TERM 1557 1438965 - 1438994 + r 100 -22.3 -3.11281 | opp_overlap 1438965 1438963 1438962 1438968, overlap 1438963 1438961 TTTCAGCGATAAGGA GAAGACCCCGGCT TTTT AGCCGGGGTCTTC TCTCATTTTAGCTCC TERM 1558 1438994 - 1438965 - R 100 -22.3 -2.8474 | opp_overlap 1438963 1438961 1438965, overlap 1438963 1438962 1438968 TTTCAGCGATAAGGA GAAGACCCCGGCT TTTT AGCCGGGGTCTTC TCTCATTTTAGCTCC TERM 1559 1438991 - 1438968 - R 100 -18.2 -3.57039 | opp_overlap 1438965 1438963 1438961, overlap 1438965 1438963 1438962 CAGCGATAAGGAGAA GACCCCGGCT TTTT AGCCGGGGTC TTCTCTCATTTTAGC TERM 1560 1439609 - 1439625 + r 70 -5.1 -4.4715 | GGGGGAGATAAGCCT GTTATCC CCG GGGTAGC TTTTATCCGTTGAGC TERM 1561 1441922 - 1441865 - R 93 -9.2 -4.82901 | gap 2, opp_overlap 1441865 1441918, overlap 1441868 1441869 CCCGTTCTACAAAAA GTACGCCGTCACACTTCGGTCGTCGGTC TGAC GACCGACGACCAAATAGTG-CTCCG-AC TGCTTGTAGGCATAC TERM 1562 1441920 - 1441868 - R 80 -12 -3.31915 | gap 1, opp_overlap 1441865 1441918, overlap 1441865 1441869 GTTCTACAAAAAGTA CGCCGTCACACTTCGGTCGTCGGTC TGAC GACCGACGACCAAATAGTG-CTCCG ACTGCTTGTAGGCAT TERM 1563 1442733 - 1442755 + r 81 -12 -3.52874 | opp_overlap 1442715 1442730, overlap 1442731 1442734 AACTACTACATAGTT CGGAACTGGC CCC GCCAGTTCCC TCTTATTGTCTCCGA TERM 1564 1442734 - 1442754 + r 86 -15.5 -2.71243 | opp_overlap 1442715 1442730, overlap 1442733 1442731 ACTACTACATAGTTC GGAACTGGC CCC GCCAGTTCC CTCTTATTGTCTCCG Daud_1367 1445587 - 1444916 - | hypothetical protein TERM 1565 1445732 - 1445713 - R 71 -10.8 -3.28712 | TTCTCTGTTGCATAA CCAAACAG TTAC CTGTTTGG CCCCTAGGCTGGCTA TERM 1566 1446068 - 1446038 - R 83 -10.5 -3.92869 | opp_overlap 1446046, overlap 1446046 CCACTCATCCACAAA CAAAAAAACGCCC GGTGT GGGCGTTTTGCTG AACCTGATGGTTCGG TERM 1567 1446060 - 1446046 - R 100 -8.5 -6.02919 | opp_overlap 1446046, overlap 1446038 CCACAAACAAAAAAA CGCCC GGTGT GGGCG TTTTGCTGAACCTGA TERM 1568 1446046 - 1446060 + r 84 -9.2 -4.26076 | opp_overlap 1446046 1446038 CCACAAACAAAAAAA CGCCCG GTG TGGGCG TTTTGCTGAACCTGA Daud_1368 1447406 - 1446108 - | tyrosyl-tRNA synthetase TERM 1569 1446376 - 1446398 + g 83 -4.6 -5.06451 | opp_overlap 1446365, overlap 1446377 AATACTTTGCGGAAC TCGTCCTCCG CAA CGGCGGCCGC TTTTTTACCGTGGTA TERM 1570 1446469 - 1446484 + g 73 -8.2 -4.07568 | opp_overlap 1446464 CGGGGATGAACCGTC CCGGTC TCAA GGCCGG TTTTCAAGGCCCGCA TERM 1571 1447935 - 1447953 + G 78 -4.6 -4.71482 | overlap 1447952 AAGCACCATCACCCA GCAGTT GGTCAAG AACTGC TTTTTGAGCTTTGAT Daud_1369 1447540 - 1449837 + | 1A family penicillin-binding protein TERM 1572 1449913 - 1449897 - T 80 -9.3 -4.18164 | opp_overlap 1449898, overlap 1449898 AAGGTTGTAAAACAA GGTCCCG GCC CGGGGCC GCAACTTCAATTCGC Daud_1370 1451170 - 1449986 - | SufBD protein TERM 1573 1450601 - 1450619 + g 72 -3.8 -4.62069 | GTTATGGATCATGGT GAAGGTCA GCT TGGCGTTC TTTTTGACGTAGAAC Daud_1371 1451956 - 1451201 - | ABC transporter related Daud_1372 1452776 - 1451949 - | hypothetical protein Daud_1373 1455183 - 1452829 - | MutS2 family protein TERM 1574 1453057 - 1453079 + g 78 -3.3 -5.00616 | overlap 1453058 GCCGCGCAGGTCCAA TTCGGTGCG CACAT CGTCCCGAG TTTTTTGCACCACGA TERM 1575 1453459 - 1453493 + g 77 -4.2 -4.84311 | overlap 1453472 1453477 CTGCCGGATCAATTC CTGCGCCTCCCGG-GC CGCCC GCTCCCGGAG-CGCCG TTTTCTTATCTAACA TERM 1576 1454149 - 1454139 - G 76 -6.8 -4.44797 | overlap 1454142 CCATCAACACTAAAA GACC GAT GGTC TTCAAAGCCACCGTT TERM 1577 1455071 - 1455057 - G 73 -12.8 -3.16564 | overlap 1455041 GGCGCACTTCATCAA GGCCCG CCG CGGGCC TCAAAGCCCGTGCCC Daud_1374 1457702 - 1455186 - | peptidase U32 TERM 1578 1455903 - 1455944 + g 74 -9.9 -3.77832 | opp_overlap 1455899, overlap 1455904 1455907 GAGCCACAGCACCAG GGTAGCGCCGTGCCGGCGG CACA CCGCCGCCGCCTCGCTGAC TTCTTCGGTTTCGGG TERM 1579 1456364 - 1456322 - G 73 -8.4 -4.07568 | opp_overlap 1456322 1456324 1456360, overlap 1456323 GTTGCTTTTCGAAAA CCGCC-GCGGTCAGCGGCCG TTTTT CGGCC-CTGACGGCCGGCAC CTTGCCTTGTGCCGA TERM 1580 1456322 - 1456340 + g 83 -7.3 -4.58395 | opp_overlap 1456322 1456323, overlap 1456324 GTTGCTTTTCGAAAA CCGCCGC GGTCA GCGGCCG TTTTTCGGCCCTGAC Daud_1375 1458691 - 1457729 - | hypothetical protein TERM 1581 1458828 - 1458808 - R 100 -8.9 -5.14965 | AGCCTCAGCAAAAAA GGGGGACAC CGC ACGCCCCCC CCACTTAGAGTTTCT Daud_1376 1459123 - 1458854 - | hypothetical protein Daud_1377 1461554 - 1459152 - | phenylalanyl-tRNA synthetase, beta subunit TERM 1582 1460972 - 1460984 + g 76 -6.2 -4.54477 | CCTGAAGGTCCAGTT CCGG AAAGG CCGG TTTTCTGCGTTTTAG Daud_1378 1462607 - 1461588 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 1583 1461892 - 1461864 - G 72 -2.3 -4.70879 | gap 1, overlap 1461866 1461881 GGTAAAGGGGAAAAA GC-TGGGCCGGA AACGCA TCCGGCGCTCGC CGAACATCTCCCGCA TERM 1584 1462338 - 1462356 + g 85 -10.2 -4.37067 | overlap 1462339 GACGTCGATCCGTTC CGCCGCCA GCC TGGCGGCC TTTTCCTCCTGTTTC TERM 1585 1462339 - 1462355 + g 76 -13.7 -3.21156 | overlap 1462338 ACGTCGATCCGTTCC GCCGCCA GCC TGGCGGC CTTTTCCTCCTGTTT TERM 1586 1462694 - 1462708 + r 86 -7.1 -5.05577 | opp_overlap 1462693 1462694 CCAAAATAAAAAATC GTCCC CAAGA GGGAC TTTTTAGTTTAGTTT Daud_1379 1463713 - 1462895 - | tRNA/rRNA methyltransferase (SpoU) TERM 1587 1463227 - 1463214 - G 74 -5.9 -4.44046 | opp_overlap 1463214 GGCAGGTGAAACAAA GCCCC GGCC GAGGC TCTTACGACCTTCGG TERM 1588 1463548 - 1463521 - G 77 -13.4 -3.28712 | GCGCCTTGTCCAGAA GTGCCACGCCAC GCGG GTGGCGGAGCAC ATCCGAAGTATAGAG Daud_1380 1464361 - 1463714 - | TrkA domain-containing protein TERM 1589 1464431 - 1464399 - R 86 -7.7 -4.74611 | gap 1 TACTAGAAAAAATAA GGCATGGTCGCCAG ACTCCA CCCGCG-CCATGCC GCTTGCGTTCACAAT Daud_1381 1464814 - 1464452 - | ribosomal protein L20 Daud_1382 1465034 - 1464840 - | ribosomal protein L35 Daud_1383 1465614 - 1465051 - | translation initiation factor IF-3 TERM 1590 1465620 - 1465601 - G 85 -5.6 -5.07107 | overlap 1465603 GAAATTCCGAAAAAA GAGCGGGC TACC ACCCGCTG AAAGAGCGCACCAAT TERM 1591 1465618 - 1465603 - G 76 -8.2 -4.15235 | overlap 1465601 AATTCCGAAAAAAGA GCGGGC TACC ACCCGC TGAAAGAGCGCACCA Daud_1384 1467712 - 1465805 - | threonyl-tRNA synthetase TERM 1592 1467815 - 1467787 - R 100 -17.4 -3.68024 | TTTCTTAACACACAA GCCCCCCGCCCC GGTCA GGGACGGGAGGC ATTCCCGCGGTTCCA Daud_1385 1468693 - 1468067 - | hypothetical protein Daud_1386 1469604 - 1468771 - | hypothetical protein TERM 1593 1468962 - 1468976 + g 71 -5.6 -4.25283 | CGTCTACCGCGCCCG GTGCCG CAT CGACAC TTTTCGTCACCACCT TERM 1594 1469205 - 1469218 + g 72 -4.5 -4.64676 | TCACGAAGCCGTCGA CGTCC AACC GGATG TTTTCTTCCAAGTAG TERM 1595 1470036 - 1470014 - g 71 -11.3 -3.44146 | gap 1, overlap 1470010 CGGCCGGAGAACGAA GCGGTCCGTC TGGC GACGG-CCGC GGTACCGCCGGCTCC Daud_1387 1469726 - 1470526 + | hydrolase TERM 1596 1470530 - 1470550 + T 82 -11.1 -3.8381 | opp_overlap 1470530 GGGACCAAATAACAA GGTCTTCCG GTC CGGAAGCCC TTTGGTGATCTGTCT TERM 1597 1470550 - 1470530 - T 88 -11.1 -4.12603 | opp_overlap 1470530 GGGACCAAATAACAA GGTCTTCCG GTC CGGAAGCCC TTTGGTGATCTGTCT Daud_1388 1471296 - 1470586 - | ABC transporter related Daud_1389 1472066 - 1471296 - | ABC transporter related Daud_1390 1473051 - 1472047 - | inner-membrane translocator Daud_1391 1473955 - 1473071 - | inner-membrane translocator TERM 1598 1473848 - 1473832 - G 100 -10.1 -4.91109 | opp_overlap 1473832 CCCCTACCATAAAAA CCTCGCC GTG GGCGAAG TTGATCAGTCTCACT TERM 1599 1474023 - 1473980 - R 100 -16.8 -4.27316 | gap 1, opp_overlap 1473996, overlap 1473981 CCCCCCAACTGAAAA CGGGCAGCGGGGGAAAGAGGC TCC GGCTCTTTCCCCCG-TACCCT GCGCAACTCTAAGGA TERM 1600 1474022 - 1473981 - R 100 -20.3 -3.16068 | gap 1, opp_overlap 1473996, overlap 1473980 CCCCCAACTGAAAAC GGGCAGCGGGGGAAAGAGGC TCC GGCTCTTTCCCCCG-TACCC TGCGCAACTCTAAGG Daud_1392 1475192 - 1474032 - | extracellular ligand-binding receptor Daud_1393 1477791 - 1475632 - | RecD/TraA family helicase TERM 1601 1477699 - 1477738 + g 83 -7 -4.81852 | overlap 1477703 GATCGTGGTCAGTTC CCTTTTCCCGGTTTCCTG GAGC CGGGCGACCGTGAAGTGG TTTTCTTCGTTGTAA Daud_1394 1478039 - 1477818 - | hypothetical protein Daud_1395 1478760 - 1478161 - | hypothetical protein TERM 1602 1479014 - 1479062 + r 78 -12.2 -3.28712 | gap 1, overlap 1479015 CCCAGACTGGTCATC ATCGGC-GGCGTTGCCGCCGGCC CGAA GGCCGCCGCCCGCGCCCGCCGGC TTCTGCCCAAGGCCC TERM 1603 1479015 - 1479061 + r 85 -15.7 -2.57132 | gap 1, overlap 1479014 CCAGACTGGTCATCA TCGGC-GGCGTTGCCGCCGGCC CGAA GGCCGCCGCCCGCGCCCGCCGG CTTCTGCCCAAGGCC Daud_1396 1479623 - 1479198 - | peptidylprolyl isomerase Daud_1397 1479792 - 1481393 + | DEAD/DEAH box helicase domain-containing protein TERM 1604 1481780 - 1481800 + T 74 -3.1 -4.84017 | CGGCTACAAGCCTTG CGTACGCCG AAA CGGTCTTCG TTTTTCTGCACCCTT TERM 1605 1482007 - 1481975 - T 76 -10 -3.87815 | gap 1, opp_overlap 1481977 1481980, overlap 1481977 1481980 GGTCATTTGGAGAAA CAGAATCCC-AGGCT CAAA AGCCTTGGGATTCTT TGTCTGAAGTGGTGG TERM 1606 1481977 - 1482005 + T 93 -12.6 -4.053 | gap 1, opp_overlap 1481975 1481977 1481980, overlap 1481980 TCATTTGGAGAAACA GAATCCC-AGGCT CAAA AGCCTTGGGATTC TTTGTCTGAAGTGGT TERM 1607 1482005 - 1481977 - T 85 -12.6 -3.52906 | gap 1, opp_overlap 1481977 1481980, overlap 1481975 1481980 TCATTTGGAGAAACA GAATCCC-AGGCT CAAA AGCCTTGGGATTC TTTGTCTGAAGTGGT TERM 1608 1482002 - 1481980 - T 71 -8.5 -3.89695 | gap 1, opp_overlap 1481980 1481977, overlap 1481977 1481975 TTTGGAGAAACAGAA TCCC-AGGCT CAAA AGCCTTGGGA TTCTTTGTCTGAAGT TERM 1609 1481980 - 1482002 + T 77 -8.5 -4.15029 | gap 1, opp_overlap 1481977 1481975 1481980, overlap 1481977 TTTGGAGAAACAGAA TCCC-AGGCT CAAA AGCCTTGGGA TTCTTTGTCTGAAGT Daud_1398 1483315 - 1482185 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 1610 1482902 - 1482892 - G 74 -2.4 -4.85599 | TCCACCGGACAAAAA GGTC GTA GTCC CCGGCGACATGCTCG TERM 1611 1483615 - 1483604 - g 72 -7.2 -4.21936 | TTTACAAGGTCAAAA CCGG GGAC CCGG TAGTGGCGCTCACCT Daud_1399 1483441 - 1484196 + | polysaccharide deacetylase TERM 1612 1484214 - 1484173 - T 89 -13.6 -3.71527 | gap 1, opp_overlap 1484210, overlap 1484175 1484176 TCGGAATTACTGAAA CACGGCCGCGGCGTG-GCC GAATA GCCGCACGCCGCGGCCCGG AAAACTCGAAGCCGC TERM 1613 1484212 - 1484175 - T 95 -14.8 -3.43853 | gap 1, opp_overlap 1484210, overlap 1484173 1484176 GGAATTACTGAAACA CGGCCGCGGCGTG-GCC GAATA GCCGCACGCCGCGGCCC GGAAAACTCGAAGCC TERM 1614 1484211 - 1484176 - T 95 -18.3 -2.6583 | gap 1, opp_overlap 1484210, overlap 1484175 1484173 GAATTACTGAAACAC GGCCGCGGCGTG-GCC GAATA GCCGCACGCCGCGGCC CGGAAAACTCGAAGC TERM 1615 1484210 - 1484264 + T 100 -16.8 -3.31144 | gap 3, opp_overlap 1484176 1484175 1484173 1484219 1484220, overlap 1484219 AGCCGCACGCCGCGG CCCGG-AA-AAC-TCGAAGCCGCAGTA CTTT TACTGCGGCTTCGCCGTTGTTACCGGG TTATCGGGGTGGAGC TERM 1616 1484219 - 1484253 + T 89 -13.7 -3.63837 | gap 1, opp_overlap 1484219 1484220, overlap 1484210 CCGCGGCCCGGAAAA C-TCGAAGCCGCAGTA CTTT TACTGCGGCTTCGCCG TTGTTACCGGGTTAT TERM 1617 1484252 - 1484219 - T 100 -13.9 -4.07568 | opp_overlap 1484210 1484219, overlap 1484220 CCGCGGCCCGGAAAA CTCGAAGCCGCAGTA CTTT TACTGCGGCTTCGCC GTTGTTACCGGGTTA TERM 1618 1484251 - 1484220 - T 100 -17.4 -3.04398 | opp_overlap 1484219 1484210, overlap 1484219 CGCGGCCCGGAAAAC TCGAAGCCGCAGTA CTTT TACTGCGGCTTCGC CGTTGTTACCGGGTT Daud_1400 1484751 - 1484257 - | membrane lipoprotein lipid attachment site TERM 1619 1484407 - 1484426 + g 83 -7.8 -4.64657 | overlap 1484408 CACCCGTTCGATGCG CGGTTCGG CCTG CCGAACCC TTTTTGCCGCTTTCC Daud_1401 1485561 - 1484959 - | hypothetical protein TERM 1620 1485436 - 1485421 - G 71 -8.2 -3.96148 | opp_overlap 1485420 CTGGCTGACCAGAAA CCCGCC GAAC GGCAGG ATGATTTCGCTCGGC TERM 1621 1485622 - 1485608 - R 100 -11.4 -5.95539 | TCCGAAAGAAAAAAA CCCCTC GAA GAGGGG GTGTGAACTGAGCTA Daud_1402 1486999 - 1485635 - | hypothetical protein TERM 1622 1486274 - 1486248 - G 72 -4.3 -4.57569 | overlap 1486249 1486250 TCACGTCCCCAAAAA GGCGCCGGG GCGCTCAAG CCCAGCCCC AGGCGGACGATGTGC Daud_1403 1487213 - 1489849 + | DNA polymerase I Daud_1404 1489828 - 1490658 + | formamidopyrimidine-DNA glycosylase Daud_1405 1490813 - 1491424 + | hypothetical protein TERM 1623 1491730 - 1491700 - g 70 -10.3 -3.57462 | opp_overlap 1491729 CAGGGGATTCTCAAA CCTGACGGTGCCT TGGAC AGGCCCCGCCTGG CGGCTCGCGTTTTTA Daud_1406 1491523 - 1492116 + | dephospho-CoA kinase Daud_1407 1492123 - 1492662 + | lytic transglycosylase, catalytic Daud_1408 1495463 - 1492671 - | isoleucyl-tRNA synthetase TERM 1624 1493107 - 1493117 + g 77 -2.4 -5.09426 | ATCTCCAGGAGCTGC ACGC TCG GCGG TTTTTTCCCGTTGGC TERM 1625 1493370 - 1493396 + g 74 -12.2 -3.53224 | CTCCCGGTAGGCCCG CAGCACCCGGTC CGT GACCCGGTGCAG TTTCAGCAGGGCGTA TERM 1626 1493504 - 1493491 - G 76 -6.7 -4.46212 | TTGCCCAGCAGAAAA CGGAA GGTG TTCCG AATCTTCCGGTAGGC TERM 1627 1494089 - 1494071 - G 82 -3.1 -5.15634 | overlap 1494072 CACCGCAGTAAAAAA TGGGG ATGGGGACG CCCCA GACACGCTGCCGCGA TERM 1628 1495534 - 1495511 - R 90 -5.2 -5.20328 | gap 1, opp_overlap 1495512, overlap 1495512 TCCTAAAAAAACAAA CCCCCACACCC TAA GGG-GCGAGAG GTCTTCCCGCGGTAC Daud_1410 1496850 - 1496182 - | DivIVA family protein Daud_1411 1497114 - 1496860 - | protein of unknown function YGGT Daud_1412 1497938 - 1497111 - | pyrroline-5-carboxylate reductase TERM 1629 1497543 - 1497565 + g 71 -12.7 -3.04144 | gap 1 GCAGTATGCGCTCGC CGCCGCGCCC ACCA GGGC-CGGCG TGTTGGGCATCACCC Daud_1413 1498382 - 1497954 - | hypothetical protein Daud_1414 1499083 - 1498379 - | alanine racemase domain-containing protein Daud_1415 1500129 - 1499473 - | phosphate uptake regulator, PhoU TERM 1630 1499899 - 1499941 + g 73 -6.9 -4.37711 | gap 1, opp_overlap 1499889, overlap 1499938 AATCACCCTGAGGTC CCGGGCCAT-CGGCTGCTGG GTCG CGATCAGCCGGATGCACCGG TTTTCGGTTTCGTAC Daud_1416 1500992 - 1500237 - | phosphate ABC transporter, ATPase subunit TERM 1631 1500632 - 1500645 + g 72 -4.5 -4.57569 | overlap 1500612 GTTCCACGATCTCGT CGAGC CGCT GCTTG TTTTTCAAACCGTGA Daud_1418 1502750 - 1501416 - | multi-sensor signal transduction histidine kinase TERM 1632 1501662 - 1501673 + g 73 -3.6 -4.69027 | overlap 1501631 1501669 CGCCGCGGCCCGGAT GGTG ATCT CGCC TTTTTCGGTGAATTT TERM 1633 1501966 - 1501983 + g 76 -8.3 -4.16016 | opp_overlap 1501965 ATGCCCAGAAAACGG CGCGCCG TTTC CGGCTCG TTTATTGCGCCGTCC TERM 1634 1502384 - 1502415 + g 75 -3.6 -4.9218 | gap 1, overlap 1502362 CGGCGATCACCCCGT CCGCCATGCTGTCCA GAA TGGCCTGCATC-CGG TTTTTCTCGTCGGTC Daud_1419 1503442 - 1502747 - | two component transcriptional regulator TERM 1635 1502948 - 1502926 - G 83 -9 -4.37092 | overlap 1502927 1502928 ATTCGCGGGAGAAAA CCCGGCCGGG GCT CCCGGCCAAT ACCCACAATAACTCG TERM 1636 1502947 - 1502927 - G 73 -12.5 -3.21934 | overlap 1502926 1502928 TTCGCGGGAGAAAAC CCGGCCGGG GCT CCCGGCCAA TACCCACAATAACTC TERM 1637 1502946 - 1502928 - G 71 -13.8 -2.52946 | overlap 1502927 1502926 TCGCGGGAGAAAACC CGGCCGGG GCT CCCGGCCA ATACCCACAATAACT Daud_1420 1504283 - 1503450 - | hypothetical protein Daud_1421 1505838 - 1504264 - | beta-lactamase domain-containing protein Daud_1422 1506155 - 1506367 + | FmdB family regulatory protein Daud_1423 1506708 - 1506445 - | PRC-barrel domain-containing protein TERM 1638 1506777 - 1506759 - R 100 -13.8 -5.29445 | opp_overlap 1506775 CCGGAAGAACAAAAA CCGCCCCG AAC CGGGACGG CCCTGGATGCTTACT Daud_1424 1507440 - 1506802 - | hypothetical protein TERM 1639 1507031 - 1506987 - G 74 -9.1 -3.96298 | CATTCACGAAGCAAA GCGGCGGGAAGAGCACGCACC ACC AGTTCGCGCCGTTTCCGGCGC CGAGCGTGACCTGGA TERM 1640 1507486 - 1507500 + r 73 -5.6 -4.58395 | GATGTATTTGCGCAT GTGGCT TAA GGCCGC TTTTTCCAGCCTGGA Daud_1425 1508235 - 1507468 - | FliA/WhiG family RNA polymerase sigma factor TERM 1641 1508360 - 1508339 - R 81 -3.6 -5.24129 | opp_overlap 1508342 1508343, overlap 1508343 1508344 GGCGGCCAGAAAAAA CCAACGCC CCGGTC GGCACCGG AGCAGGTCTTGTTTG TERM 1642 1508364 - 1508343 - R 80 -10.1 -3.99236 | opp_overlap 1508342 1508343, overlap 1508339 1508344 GCCAGAAAAAACCAA CGCCCCGGT CGGC ACCGGAGCA GGTCTTGTTTGACTG TERM 1643 1508363 - 1508344 - R 71 -11.4 -2.98457 | opp_overlap 1508343 1508342, overlap 1508339 1508343 CCAGAAAAAACCAAC GCCCCGGT CGGC ACCGGAGC AGGTCTTGTTTGACT Daud_1426 1509129 - 1508404 - | FliA/WhiG family RNA polymerase sigma factor Daud_1427 1510065 - 1509145 - | peptidase U4, sporulation factor SpoIIGA TERM 1644 1509629 - 1509617 - G 83 -9.1 -4.36914 | CGGCGTTTTAGAAAA GCACC CCC GGTGC GTCCCACCAGCCACA TERM 1645 1510163 - 1510137 - R 100 -15.2 -5.27023 | opp_overlap 1510113 1510110 ATGCCAAAAACAAAA CCCCGGTTCCTA TTA TAGCAACCGGGG CTGGAAAAACCTGTA Daud_1428 1511402 - 1510350 - | cell division protein FtsZ TERM 1646 1510422 - 1510447 + g 70 -10.3 -3.57144 | overlap 1510423 CAGTTCATCCTCGGG TGCCGCGGCGG CGAC CTGCCGCGCCG TTTCCACCTCAAAAC TERM 1647 1510677 - 1510698 + g 74 -12.9 -3.30124 | GCTGGAGATCGCCAT CCGGGCCGC CTCC GCCGCCCGG TTGTCGCCGGTCGCC Daud_1429 1511833 - 1511477 - | hypothetical protein Daud_1430 1512542 - 1511838 - | hypothetical protein Daud_1431 1513263 - 1512547 - | hypothetical protein Daud_1432 1513960 - 1513250 - | polypeptide-transport-associated domain-containing protein TERM 1648 1514053 - 1514026 - R 93 -12.8 -3.9444 | gap 1, opp_overlap 1514026 1514029 1514030, overlap 1514030 1514032 CAAATCTTAACCAAA TAAAGG-GCGGGC TAT GCCCGCGCCCTTA TGATCTCTGCTCCCA TERM 1649 1514048 - 1514030 - R 95 -11.6 -4.56702 | opp_overlap 1514030 1514029 1514026, overlap 1514026 1514032 TCTTAACCAAATAAA GGGCGGGC TAT GCCCGCGC CCTTATGATCTCTGC TERM 1650 1514046 - 1514032 - R 75 -12.8 -2.59256 | opp_overlap 1514030 1514029 1514026, overlap 1514030 1514026 TTAACCAAATAAAGG GCGGGC TAT GCCCGC GCCCTTATGATCTCT Daud_1433 1515290 - 1514037 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Daud_1434 1516206 - 1515304 - | UDP-N-acetylenolpyruvoylglucosamine reductase Daud_1435 1517580 - 1516213 - | UDP-N-acetylmuramate--alanine ligase TERM 1651 1516386 - 1516413 + g 74 -4.9 -4.56597 | gap 2, opp_overlap 1516390, overlap 1516388 1516389 1516412 GAATCTCGTCTCTGA TCAA--CCGGGCG GTCA CGCCCGGAATTGG TTTTTCCCCGGCCGG TERM 1652 1516407 - 1516390 - G 76 -14.1 -3.14132 | opp_overlap 1516389 1516388 1516386 CTCGTCTCTGATCAA CCGGGCG GTCA CGCCCGG AATTGGTTTTTCCCC TERM 1653 1516554 - 1516575 + g 70 -7.9 -4.08485 | opp_overlap 1516525, overlap 1516537 1516558 GCTTCGGCCTGGTCT GGCGCGCTG CTTC CAGCGTGGC TTTGATTTCCGTGGG Daud_1436 1518821 - 1517700 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 1654 1518287 - 1518309 + g 71 -9 -3.71649 | overlap 1518281 1518289 GAATGCCCAGGTGCC TGCGCGCCTG TTC CCGGCGCGTG TTTAGGATTTCCGGC TERM 1655 1518289 - 1518307 + g 74 -11.6 -3.43919 | overlap 1518281 1518287 ATGCCCAGGTGCCTG CGCGCCTG TTC CCGGCGCG TGTTTAGGATTTCCG TERM 1656 1518728 - 1518746 + g 74 -14.6 -2.62192 | opp_overlap 1518725, overlap 1518727 CGACGTAGAGCAGGT CGGCGTCA GGA TGACGCCG CTTGATTCCCTCCGC Daud_1437 1519954 - 1518851 - | stage V sporulation protein E TERM 1657 1518929 - 1518913 - G 82 -3.6 -5.1101 | overlap 1518916 CGATCAGGGAAAAAA CAAGGG AGTTG CCCCCG AAACTGATAAAAGGC TERM 1658 1518928 - 1518916 - G 78 -6.9 -4.64763 | overlap 1518913 TCAGGGAAAAAACAA GGGAG TTG CCCCC GAAACTGATAAAAGG Daud_1438 1521331 - 1519982 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 1659 1521202 - 1521218 + g 73 -2.9 -4.81551 | opp_overlap 1521198 CGTTTAAAGCACCCA GTTTGAG GTC CTCCAGC TTTTTGATGTCGGTC Daud_1439 1522352 - 1521348 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Daud_1440 1523761 - 1522349 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Daud_1441 1525232 - 1523733 - | UDP-N-acetylmuramyl-tripeptide synthetase TERM 1660 1524689 - 1524662 - GR 76 -6.2 -4.64861 | gap 1 CGGCCTCAAAAGAAA GCCCGTGCACCCG GGA CAGGCGCA-GTGC GTGTGAGGAAACCTC TERM 1661 1525144 - 1525126 - GR 83 -5.8 -4.84918 | overlap 1525128 GCCACAAACATAAAA CCCGGCTG GGT CTGCCGCG AATCATAGGCGATCC Daud_1442 1527423 - 1525201 - | stage V sporulation protein D TERM 1662 1526098 - 1526115 + gr 70 -6.9 -4.1673 | CTCGCGGACCACCTT GCCGTCG TGAT CGACGAC TTTCTTAACCAGTTG TERM 1663 1527404 - 1527387 - GR 77 -4.1 -4.93296 | opp_overlap 1527387, overlap 1527390 CCAGGAGGAGAAAAA TTATGCG CTTG CGCATGA TAATTCTGGTGGGCT Daud_1443 1527990 - 1527484 - | septum formation initiator Daud_1444 1528967 - 1527993 - | S-adenosyl-methyltransferase MraW TERM 1664 1528353 - 1528394 + g 74 -10.1 -3.794 | gap 1, opp_overlap 1528345 GAAGGTACGCCGGGC GGGGTGCGGTCCGGTGCG CCGCGCC CGCGCCGGAACG-GCCTC TTTGATCACTTCCGC Daud_1445 1529520 - 1528996 - | MraZ protein TERM 1665 1529253 - 1529234 - G 70 -10.6 -3.56366 | AACAACCGCGTGAAA GCCCGGGC CTCC GCCCTGGC AAACGGCAGCTTCCG TERM 1666 1529589 - 1529568 - R 90 -12.3 -3.97368 | opp_overlap 1529568 TGCCCAATGCAGAAA GGGTCCTCC CGCG GGAAGACCC TTTGAGAACGAATTT TERM 1667 1529568 - 1529589 + r 71 -10.1 -3.5394 | opp_overlap 1529568 TGCCCAATGCAGAAA GGGTCCTCC CGCG GGAAGACCC TTTGAGAACGAATTT Daud_1446 1530312 - 1529617 - | hypothetical protein TERM 1668 1530472 - 1530454 - H 73 -5.2 -4.59853 | overlap 1530455 GCAAGCGCGGAAAAA GCACGAGC CTT GCTCATGG CGTGCCATACTGCAG TERM 1669 1531119 - 1531094 - g 76 -6.9 -4.44448 | gap 1 ATGACCCCAAAGAAA TGCCATGG-TAC AAT GAAGCCATGGCA GGTGAAGAAAATGCC Daud_1447 1530859 - 1531173 + | hypothetical protein TERM 1670 1531332 - 1531322 - T 73 -5.4 -4.62336 | AGGGCACTGGAAAAA CTGA CCG TCAG GACCGAACCCCGCAC TERM 1671 1531549 - 1531539 - T 74 -8.2 -3.95852 | overlap 1531540 AGGCCAGGAACGAAA GGCG TGT CGCC GAAGGCAAAAAGCCG Daud_1449 1533539 - 1532736 - | HisJ family histidinol phosphate phosphatase Daud_1450 1534631 - 1533546 - | hypothetical protein TERM 1672 1534130 - 1534143 + g 86 -8.1 -4.56597 | CCGCCTGCCAGCGGC CCTGG AACG CCAGG TTTTTGACCACCAGG TERM 1673 1534271 - 1534255 - G 83 -9.3 -4.36914 | opp_overlap 1534262, overlap 1534256 TGTCCCTTCACAAAA GCGGCCG GTC CGGCCGG GGCTCGTTCCAGGAA TERM 1674 1534270 - 1534256 - G 73 -12.8 -3.21934 | opp_overlap 1534262, overlap 1534255 GTCCCTTCACAAAAG CGGCCG GTC CGGCCG GGGCTCGTTCCAGGA TERM 1675 1534676 - 1534655 - R 100 -9.4 -5.07652 | CCTCCGAAAACAAAA GCCAGCCC GGTTAA AGGCTGGC CTTGGAATAGACATC Daud_1451 1534956 - 1534693 - | ribosomal protein L27 Daud_1452 1535290 - 1534979 - | ribosomal protein L21 Daud_1453 1536670 - 1535420 - | ribonuclease TERM 1676 1535985 - 1536003 + g 76 -8.8 -4.20516 | opp_overlap 1535985, overlap 1535981 TAGCTGGTGAAGGAA TCGAGCAC CAG GCGCTCGA TTTCTTCCGTGAACA Daud_1454 1537497 - 1536823 - | hypothetical protein TERM 1677 1537023 - 1537046 + g 70 -11.7 -3.18467 | overlap 1536980 TCAGGCGGTGGATGC CCGGGCGGA TGTTTT TCCGCCTGG TTCCCTTGGCAGTTT Daud_1455 1539343 - 1537484 - | radical SAM domain-containing protein TERM 1678 1538467 - 1538489 + g 78 -9.8 -4.07568 | overlap 1538470 GCAGTTCCGCGGCCT GGACCAGGAG AGT CTCCGGGTTC TTTTCCCGCACCGGA TERM 1679 1538470 - 1538486 + g 72 -7.9 -4.17048 | overlap 1538467 GTTCCGCGGCCTGGA CCAGGAG AGT CTCCGGG TTCTTTTCCCGCACC TERM 1680 1538541 - 1538531 - G 73 -8.2 -4.07568 | overlap 1538532 CCCGGCCTGGCAAAA GCGG CAC CCGC GGGTACAGCCCCGGA Daud_1456 1540330 - 1539452 - | peptidase M50 TERM 1681 1539665 - 1539680 + g 82 -3.2 -5.24129 | opp_overlap 1539659 TGGCAAAATCCCGTG CCGG TCCAGATC CCGG TTTTTTGTGGCCAGG Daud_1457 1541106 - 1540381 - | peptidase M23B TERM 1682 1541200 - 1541190 - R 70 -3.2 -4.72272 | GGGGGTGATGAAAAA CGTC GTT AACG CACTTCTTTGACCTG Daud_1458 1541992 - 1541195 - | methyltransferase type 11 Daud_1459 1543185 - 1542019 - | cell cycle protein TERM 1683 1542153 - 1542114 - G 83 -9.2 -4.27316 | gap 1, opp_overlap 1542126 GTCCGTAACTGAAAA GCGGCAGCG-TGATCCCGG TAA CCGGCATTATCCCCGCCGC CATGCCCACGTTGGT TERM 1684 1542426 - 1542393 - G 78 -10.1 -4.07885 | opp_overlap 1542396 GAGTGCCGCTGAAAA GCCCCCGGCCCCAGA GGCC CCCGGCGCCGATGGC GATCTGGGACTGGAT TERM 1685 1543031 - 1543021 - G 74 -2.4 -4.82901 | opp_overlap 1543021 CTGCTTCCACAAAAA CCCG AAA CCGG CTTCTCCTGGAAGGC TERM 1686 1543208 - 1543233 + r 79 -7.5 -4.38712 | opp_overlap 1543213, overlap 1543211 1543213 1543213 GATACCCGGACAGCT AAAAAGGGGGG TTGC CCCCCCTGTTC TTTTCTCCGGCTAGA TERM 1687 1543211 - 1543230 + r 84 -9.2 -4.31397 | opp_overlap 1543213, overlap 1543208 1543213 1543213 ACCCGGACAGCTAAA AAGGGGGG TTGC CCCCCCTG TTCTTTTCTCCGGCT TERM 1688 1543213 - 1543228 + r 83 -11.8 -3.75581 | opp_overlap 1543213, overlap 1543211 1543208 1543213 CCGGACAGCTAAAAA GGGGGG TTGC CCCCCC TGTTCTTTTCTCCGG TERM 1689 1543213 - 1543227 + r 76 -12.8 -2.84625 | opp_overlap 1543213, overlap 1543213 1543211 1543208 CCGGACAGCTAAAAA GGGGGG TTG CCCCCC CTGTTCTTTTCTCCG TERM 1690 1543227 - 1543213 - R 100 -12.8 -4.70659 | opp_overlap 1543211 1543208 1543213 1543213 CCGGACAGCTAAAAA GGGGGG TTG CCCCCC CTGTTCTTTTCTCCG Daud_1460 1543513 - 1543244 - | cell division topological specificity factor MinE Daud_1461 1544339 - 1543539 - | septum site-determining protein MinD Daud_1462 1544750 - 1544364 - | septum formation inhibitor MinC Daud_1463 1546831 - 1544864 - | peptidoglycan glycosyltransferase TERM 1691 1546133 - 1546145 + g 74 -4.7 -4.56597 | overlap 1546134 CAGGGTCAGGTCGTG ACCGG GAA CCGGG TTTTTCACGCCCAGA Daud_1464 1547340 - 1546846 - | hypothetical protein TERM 1692 1547202 - 1547180 - G 76 -7 -4.43501 | overlap 1547189 AACCCACCCAGAAAA CCCAAAAAAG CCC CTTCCCTGGG GCCGTTGAAGATGGC TERM 1693 1547204 - 1547189 - G 100 -7.5 -5.28315 | overlap 1547180 AGAAAACCCAAAAAA GCCCC TTCCCT GGGGC CGTTGAAGATGGCGT Daud_1465 1548171 - 1547347 - | rod shape-determining protein MreC Daud_1466 1549204 - 1548173 - | cell shape determining protein MreB Daud_1467 1549922 - 1549230 - | DNA repair protein RadC Daud_1468 1550540 - 1549929 - | maf protein Daud_1469 1550790 - 1550545 - | hypothetical protein Daud_1470 1551317 - 1550844 - | endoribonuclease L-PSP TERM 1694 1551264 - 1551250 - G 76 -12.8 -3.48395 | ACCCCGGGCACATAA GCCGCC ACC GGCGGC GGGGCTGCGGGAATC TERM 1695 1551414 - 1551394 - R 81 -3.8 -5.14563 | opp_overlap 1551394, overlap 1551407 1551409 1551410 TTTGGCAGCAAAAAA GCGGCTGC AAAAA GACGCCGC GTTTGGGCGGCCTGC Daud_1471 1552489 - 1551497 - | sodium/calcium exchanger membrane region TERM 1696 1551737 - 1551755 + g 71 -5.2 -4.4078 | opp_overlap 1551715 1551713, overlap 1551715 1551713 1551711 CCCGGTGATGTTCCC GAGGGCCA GGG TGTCCTTC TTTTCCTTCAGCCAG TERM 1697 1552153 - 1552139 - G 73 -3.4 -4.7497 | overlap 1552141 GGCAGCCAGGAAAAA CCCCAG GTC CCGGCG CAAAAGGTCCGGGTG TERM 1698 1552628 - 1552657 + r 71 -10.8 -3.28712 | CCGTACAGGGAGCCC TCCGGTAGCC ACCAGTATCC GGCTACCGGA TTCTCAGACGCAAAG Daud_1472 1554080 - 1552803 - | FolC bifunctional protein TERM 1699 1553514 - 1553534 + g 74 -5.3 -4.56775 | opp_overlap 1553528 1553529, overlap 1553510 1553515 GGTCACCAGCGGCAC CCCGGGCTT GAT AATCCCGGC TTTTTCCCGGGCGAT TERM 1700 1554098 - 1554116 + r 87 -16 -2.92668 | opp_overlap 1554098, overlap 1554093 1554100 TTCCCTCACCTCAAA GAGGCGCC CAA GGCGCCTC TGTCCTTGCATCGTA TERM 1701 1554116 - 1554098 - R 100 -16 -3.59979 | opp_overlap 1554093 1554098 1554100 TTCCCTCACCTCAAA GAGGCGCC CAA GGCGCCTC TGTCCTTGCATCGTA TERM 1702 1554100 - 1554114 + r 81 -12.8 -3.0127 | opp_overlap 1554098, overlap 1554098 1554093 CCCTCACCTCAAAGA GGCGCC CAA GGCGCC TCTGTCCTTGCATCG TERM 1703 1554226 - 1554180 - R 91 -17.4 -2.72344 | opp_overlap 1554197, overlap 1554182 1554197 TCCTATTCCGAATGA CACCTGGCCTAAAAAAAGGGGC CTG GCCCCTTTTTTTAGGGGCGGCG GAGCACCGCCAACCG TERM 1704 1554224 - 1554182 - R 93 -16.4 -2.90723 | opp_overlap 1554197, overlap 1554180 1554197 CTATTCCGAATGACA CCTGGCCTAAAAAAAGGGGC CTG GCCCCTTTTTTTAGGGGCGG CGGAGCACCGCCAAC TERM 1705 1554197 - 1554209 + r 100 -10.5 -5.40072 | opp_overlap 1554182 1554180 1554197 CCTGGCCTAAAAAAA GGGGC CTG GCCCC TTTTTTTAGGGGCGG TERM 1706 1554209 - 1554197 - R 100 -10.5 -5.40072 | opp_overlap 1554197, overlap 1554182 1554180 CCTGGCCTAAAAAAA GGGGC CTG GCCCC TTTTTTTAGGGGCGG Daud_1473 1556860 - 1554215 - | valyl-tRNA synthetase TERM 1707 1555491 - 1555478 - G 76 -9.5 -4.09685 | GCCCAGGGTCGAAAA CGGCC AGAG GGCCG AAGAAAACCAGGTAT TERM 1708 1555526 - 1555499 - G 76 -5.6 -4.63932 | gap 1, overlap 1555500 GAGGGCCGAAGAAAA CCAGGTATCCAGA ACG TCCGGAT-CCTGC TCGATGTTTTCCCTC Daud_1474 1557022 - 1558020 + | hypothetical protein TERM 1709 1558051 - 1558025 - T 72 -2.2 -4.90266 | gap 1 CCCAGCAATGAAAAA GCCCCCCTGGT TTTCCG ATC-GGGGAGC TTCCGGCTGCATGAA Daud_1475 1558519 - 1558082 - | hypothetical protein TERM 1710 1558507 - 1558482 - G 72 -7.5 -4.23213 | opp_overlap 1558482 1558470 1558484 TCCAGATTGAAGAAA GAGGGCGCACA TGTA TTTTCGCCCTC TGCTTCAACCATTCC Daud_1476 1560962 - 1558569 - | ATP-dependent protease La TERM 1711 1558725 - 1558745 + g 71 -4.6 -4.51812 | CTTTGACCGCACGTT GGCCGGGA TGTCC TCCAGGTC TTTCTTGTTCTCCAG TERM 1712 1561149 - 1561164 + r 91 -11.8 -4.08767 | opp_overlap 1561149 GTCCAACAGTAAAAA GCGCCC GAAG GGGCGC TTTTCAACCGCTGAC TERM 1713 1561164 - 1561149 - R 100 -11.8 -4.87626 | opp_overlap 1561149 GTCCAACAGTAAAAA GCGCCC GAAG GGGCGC TTTTCAACCGCTGAC Daud_1477 1562891 - 1561200 - | peptidase S16, lon domain-containing protein TERM 1714 1563017 - 1562997 - R 100 -19.7 -4.20868 | opp_overlap 1562994 1562993 1562991 TTGCCAAAATAATAA GGCCGCCCG GTA CGGGCGGCC GACCTCTTTGCGGCC Daud_1478 1564286 - 1563033 - | ATP-dependent Clp protease, ATP-binding subunit ClpX Daud_1479 1564898 - 1564302 - | ATP-dependent Clp protease, proteolytic subunit ClpP Daud_1480 1566283 - 1564967 - | trigger factor Daud_1481 1566532 - 1567392 + | tRNA (adenine-N(1)-)-methyltransferase Daud_1482 1567518 - 1568225 + | CRP/FNR family transcriptional regulator Daud_1483 1568641 - 1568300 - | hypothetical protein TERM 1715 1568414 - 1568399 - G 72 -2.5 -4.67608 | CACGGCAACATAAAA CGGAA TCCAGG TCCCG TCCTTATCTTTTGCA TERM 1716 1568855 - 1568828 - R 100 -7.6 -5.56264 | opp_overlap 1568844, overlap 1568832 GGCAAACACAAAAAA TTAAGCCCTCCG TTTG CGGAGGGCCTCG CCGGTTTGCCGCAAG TERM 1717 1568851 - 1568832 - R 100 -15 -4.03002 | opp_overlap 1568844, overlap 1568828 AACACAAAAAATTAA GCCCTCCG TTTG CGGAGGGC CTCGCCGGTTTGCCG Daud_1484 1569386 - 1568943 - | hypothetical protein TERM 1718 1569360 - 1569338 - G 76 -13.4 -3.14051 | overlap 1569336 TGAGGTTCATCAACA CCCCGCCGGT CAG ACCGGCGAAG AAACCAATAGTAAGC TERM 1719 1569463 - 1569493 + r 81 -3.8 -5.13722 | opp_overlap 1569467, overlap 1569464 1569467 GCCCGCTTCCAAACG AAAAGGCCTCCGAG TCA CTCGCAGGCCTGAG TTTTATTTTGGTGAG TERM 1720 1569489 - 1569467 - R 100 -13.4 -4.54727 | opp_overlap 1569467 1569464 1569463 GCTTCCAAACGAAAA GGCCTCCGAG TCA CTCGCAGGCC TGAGTTTTATTTTGG TERM 1721 1569467 - 1569489 + r 81 -13.4 -2.92168 | opp_overlap 1569467, overlap 1569464 1569463 GCTTCCAAACGAAAA GGCCTCCGAG TCA CTCGCAGGCC TGAGTTTTATTTTGG Daud_1485 1571175 - 1570825 - | gas vesicle protein GVPa Daud_1486 1572278 - 1571172 - | gas vesicle synthesis GvpLGvpF TERM 1722 1571731 - 1571750 + g 77 -2.1 -4.99134 | overlap 1571732 ATCGTGTTGAATCCC ATCGGTA GAACGG TACCGAA TTTTTCATTTGCCAT TERM 1723 1571966 - 1571985 + g 86 -8.6 -4.63218 | AGATATACCTGGCCG GGTTCTTG GAAT CGAGAACC TTTTCTTCCGGAGAA TERM 1724 1572009 - 1572039 + g 72 -7.4 -4.10657 | CGGAGAAACAGTGCC CGCATCCTCCTGTG TTA CGCCGGAGGAAGGG TTTTCAGGGCTCTCC Daud_1487 1572600 - 1572283 - | gas vesicle K TERM 1725 1572366 - 1572376 + g 78 -6.8 -4.59853 | CTATCCGGTCCAAGC CGTC CCT GACG TTTTTCACCGATTCG Daud_1488 1573633 - 1572611 - | hypothetical protein Daud_1489 1574030 - 1573650 - | gas vesicle protein GVPa Daud_1490 1574428 - 1574183 - | gas vesicle G Daud_1491 1575213 - 1574428 - | gas vesicle synthesis GvpLGvpF Daud_1492 1577491 - 1575230 - | AAA family ATPase, CDC48 subfamily protein TERM 1726 1576123 - 1576105 - G 79 -8.1 -4.26076 | opp_overlap 1576116 GTACCTCCACGAAAA CCTCCCG GATGG CGGAAGG TTCCACATCTTTAAA TERM 1727 1576429 - 1576419 - G 73 -8.2 -4.07687 | overlap 1576420 ATCTCCCGGTCAAAA CGGC CCG GCCG CCTGAGCGCGGGGTC TERM 1728 1577433 - 1577421 - G 74 -2.6 -4.86385 | ACCCGCAAAAACAAA CCGG TAGAT CCAG TATCCATTCTTATCG TERM 1729 1577521 - 1577502 - R 80 -5 -4.96996 | overlap 1577503 GCCAAATAAAAGAAA TTTTGACC TACC GGTCAAAT AATCCACAGCCTTCA Daud_1493 1577952 - 1577584 - | hypothetical protein TERM 1730 1577913 - 1577923 + g 72 -2.4 -4.6821 | opp_overlap 1577913 ATCCACGAAGATACA TGGG ATC CCCC TTTTCTCTTGCAATT Daud_1494 1578503 - 1577949 - | hypothetical protein TERM 1731 1578237 - 1578251 + g 82 -2.8 -5.2112 | AGTAATTCCTTCGAT GACAAG ATC CTTTTC TTTTTTACTAATGTT Daud_1495 1579494 - 1578580 - | gas vesicle protein GvpN Daud_1496 1579838 - 1579557 - | hypothetical protein TERM 1732 1579947 - 1579912 - R 100 -20.6 -5.31275 | opp_overlap 1579908 CTCCATGACAAAAAA GTTCCCCTCCTCCAGG CCAC CCTAAAGGAGGGGAAC AAACTGCTTCAAGTT Daud_1497 1580282 - 1579965 - | hypothetical protein TERM 1733 1580326 - 1580359 + r 100 -19.9 -4.25056 | GAATAGGGGGAAGGG GTTTGTCGAGGTATT CGGA AATACCTCGACAAAC TTTCTTAATAAAATC Daud_1498 1580611 - 1580384 - | gas vesicle protein GVPa Daud_1499 1580956 - 1580726 - | gas vesicle protein GVPa TERM 1734 1581329 - 1581310 - R 72 -2.2 -4.89852 | TTATATGGAGAAAAA GTAATAAT TGTG ATTCTTAC TAACCGCATGAATTT Daud_1500 1581709 - 1581458 - | hypothetical protein TERM 1735 1581768 - 1581730 - H 71 -7.5 -3.92625 | opp_overlap 1581737, overlap 1581737 GAGACCCTAATCAAA CGCATAACGGA-CCCCTCC TTA GCAGGGGGTCCGTTGT-CG GTGACAGCCCATTTA TERM 1736 1581762 - 1581737 - H 71 -9.7 -3.49878 | gap 1, opp_overlap 1581737, overlap 1581730 TAATCAAACGCATAA CGGA-CCCCTCC TTA GCAGGGGGTCCG TTGTCGGTGACAGCC TERM 1737 1581737 - 1581762 + H 70 -9.7 -3.35679 | gap 1, opp_overlap 1581737 1581730 TAATCAAACGCATAA CGGA-CCCCTCC TTA GCAGGGGGTCCG TTGTCGGTGACAGCC TERM 1738 1581820 - 1581791 - H 100 -19.5 -3.73647 | CCCATTTAGTAACAA CGGCTTTGGCTTT AAAA AAAGCCAAAGCCG CGTCTGGAAACCTCT TERM 1739 1582021 - 1582041 + H 71 -4.6 -4.63218 | opp_overlap 1582021 1582022, overlap 1582022 AGCGGTCTGAGAAAA TGTCACCC ATGAA GGGAGACG TTTTCTTGAAACCCA Daud_1501 1582047 - 1583375 + | integrase catalytic subunit TERM 1740 1584217 - 1584243 + T 100 -16.6 -5.42862 | opp_overlap 1584221, overlap 1584221 GTAGACGAAAATACT AAAACCGCCCGG TCA CCGGGCGGTTTG TTTTTTTAGCGGTAT TERM 1741 1584239 - 1584221 - T 100 -17.4 -4.56729 | opp_overlap 1584217 1584221 ACGAAAATACTAAAA CCGCCCGG TCA CCGGGCGG TTTGTTTTTTTAGCG TERM 1742 1584221 - 1584239 + T 100 -17.4 -5.20328 | opp_overlap 1584221, overlap 1584217 ACGAAAATACTAAAA CCGCCCGG TCA CCGGGCGG TTTGTTTTTTTAGCG Daud_1502 1585925 - 1584594 - | transposase, IS4 family protein TERM 1743 1585026 - 1585016 - G 76 -6.8 -4.48713 | GGCAGCAACAATAAA CCGT TCC ACGG TAATCGTAAACGATG TERM 1744 1585922 - 1585945 + g 75 -3.8 -4.68456 | GTTGTGGTATAATGG CCATAAGGGA AACC TCCTTCGTGG TTCTTTTTTGGTGGT Daud_1503 1587722 - 1586391 - | transposase, IS4 family protein TERM 1745 1586823 - 1586813 - G 76 -6.8 -4.48713 | GGCAGCAACAATAAA CCGT TCC ACGG TAATCGTAAACGATG TERM 1746 1587719 - 1587742 + g 75 -3.8 -4.68456 | GTTGTGGTATAATGG CCATAAGGGA AACC TCCTTCGTGG TTCTTTTTTGGTGGT Daud_1504 1588570 - 1587929 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Daud_1505 1589324 - 1588539 - | ribonuclease PH Daud_1506 1590132 - 1589371 - | beta-lactamase domain-containing protein Daud_1507 1591125 - 1590145 - | 2-hydroxyglutaryl-CoA dehydratase, D-component Daud_1508 1591996 - 1591175 - | glutamate racemase TERM 1747 1591339 - 1591329 - G 80 -4.6 -4.82901 | TTGTCTGCAGAAAAA CCCC GCC GGAG CATATCAAGCCGCGC TERM 1748 1592127 - 1592107 - R 100 -16.1 -4.59853 | opp_overlap 1592100 GTAACCGGCGAAAAA CCCCCGGGC AGC ACCCGGGGG TTCAGGGTCTTCAAA Daud_1509 1594410 - 1592155 - | N-acetylmuramoyl-L-alanine amidase TERM 1749 1592512 - 1592502 - G 74 -2.4 -4.84359 | opp_overlap 1592508 GGATGCTCACAAAAA CGTC GGC GCCG GCCTGGTTCGCGATT TERM 1750 1594610 - 1594654 + G 72 -7.7 -4.22652 | overlap 1594611 1594647 AAAGCGCTTTTTCTG TTTCTGGCCTTCTCCCTGACC GCC GGTCCGGCTGAAGGCGGGGAG TTTTACCTGGTCTGC TERM 1751 1595313 - 1595342 + G 72 -7.7 -4.11216 | gap 1 CCGAACACCGTCCAA CCCTGGTC-CACGG GGA CCGCGAGTCCGGGG TTTTGGAAATCCAAC Daud_1510 1594586 - 1595509 + | ErfK/YbiS/YcfS/YnhG family protein Daud_1511 1596426 - 1595521 - | hypothetical protein TERM 1752 1596093 - 1596081 - G 85 -10.5 -4.30576 | CGCTGACCATTAAAA CCGGG GTG CCCGG GGGAATCAAGTCAGT Daud_1512 1597041 - 1596565 - | hypothetical protein TERM 1753 1596801 - 1596776 - G 73 -6.7 -4.37092 | ATCTCGGCCAGAAAA GCTCCGTCCTC CGCC GTGACCGGAGC AACCGGCCCGGAACA TERM 1754 1597415 - 1597393 - H 90 -8.4 -4.68645 | overlap 1597394 1597407 GATGGAAAAGCAAAA CCCCGGAG TATAAAG CTCCGGGA GCGCTAAAGGGAGAG TERM 1755 1597414 - 1597394 - H 70 -9.7 -3.40102 | overlap 1597393 1597407 ATGGAAAAGCAAAAC CCCGGAG TATAAAG CTCCGGG AGCGCTAAAGGGAGA TERM 1756 1597709 - 1597688 - H 88 -11.5 -4.17048 | opp_overlap 1597688 GTCGGCCGAAAAGAA CCACGCTCG GGAA CGGGCGTGG TTTTCTGGTACTCTT TERM 1757 1597688 - 1597709 + H 100 -13.7 -4.50583 | opp_overlap 1597688 GTCGGCCGAAAAGAA CCACGCTCG GGAA CGGGCGTGG TTTTCTGGTACTCTT TERM 1758 1598238 - 1598264 + G 76 -13.7 -3.14132 | gap 1, opp_overlap 1598228 ATCAAGCCGCCGGTT CCCGTGCGGGTG GAAC CGCCCGC-CGGG TTACTGCCGGACCGG TERM 1759 1598531 - 1598507 - g 74 -5.6 -4.4267 | opp_overlap 1598526 TGTTAAAATGGAAAA GTGGGCGGAA GGCTA CCCCGGCCAC ATCCCCGGCAAACTC Daud_1514 1597785 - 1598630 + | copper amine oxidase domain-containing protein TERM 1760 1599318 - 1599338 + G 72 -3.9 -4.66537 | overlap 1599319 CGCCGGAAGGCCTGG TTCCCGTCT GGC AGGCAGGAG TTTTCTCTTACCGCG TERM 1761 1600646 - 1600665 + G 86 -7 -5.03145 | opp_overlap 1600629, overlap 1600642 CTGGTTTTTTACCAG GCCCGCGT TCTG GCCCGGGC TTTTTTCCAGGGTTC TERM 1762 1600723 - 1600756 + G 75 -3.7 -4.68479 | gap 1, opp_overlap 1600708, overlap 1600713 1600726 CGTAGCCGCCTCTGC CTACGCAGTCTACGGC TTG GCCGGAG-CGGTGTTG TTTTACTTATTTTAT Daud_1515 1598696 - 1601647 + | hypothetical protein TERM 1763 1601963 - 1601939 - T 71 -9.9 -3.57144 | GCCGTCACCGCCAAA GCCTTGCCGCC GTA GGCTTCAAGGC CGCTCCAGGGAATTT TERM 1764 1602758 - 1602776 + T 100 -13.8 -3.97947 | TCACCTCCTTTCGGC CCTGCCCG CCC CGGGCGGG TTTCTGCTCCCTGAA TERM 1765 1602799 - 1602822 + T 81 -13.8 -2.87211 | opp_overlap 1602800 TCCCTGAAAACAGAA AGGGCCGGGA TTTC TCCCGGCCCG TCTCTCACCGCACCT TERM 1766 1602821 - 1602800 - T 100 -17.3 -4.45168 | opp_overlap 1602799 CCCTGAAAACAGAAA GGGCCGGGA TTTC TCCCGGCCC GTCTCTCACCGCACC Daud_1517 1603169 - 1602843 - | hypothetical protein Daud_1518 1603449 - 1603141 - | hypothetical protein TERM 1767 1603352 - 1603370 + gr 76 -11.8 -3.07344 | opp_overlap 1603347, overlap 1603354 CGGAACAAAGGCCCG CCGAAGAA GGC TTCTTCGG TCTCTTCCGGCCTCA TERM 1768 1603537 - 1603514 - R 100 -16 -4.1891 | opp_overlap 1603512 1603511 TCTTGTCAATACAAA GGACCGGGAG AGCG CTCCCGGCCC CGCTTCCTAAGCGTT Daud_1519 1604062 - 1603712 - | hypothetical protein TERM 1769 1604412 - 1604385 - H 76 -12.6 -2.71712 | opp_overlap 1604386 1604391, overlap 1604384 GGTGGCCCTGCAAAT GGGGAGCGGCCC GGTT GGGCCGTTCCCT TGAGTCTCGCTCGGT TERM 1770 1604386 - 1604411 + H 100 -18.3 -3.1355 | opp_overlap 1604385 1604384, overlap 1604391 GTGGCCCTGCAAATG GGGAGCGGCCC GGTT GGGCCGTTCCC TTGAGTCTCGCTCGG TERM 1771 1604391 - 1604406 + H 78 -11.8 -3.20164 | opp_overlap 1604385 1604384, overlap 1604386 CCTGCAAATGGGGAG CGGCCC GGTT GGGCCG TTCCCTTGAGTCTCG Daud_1521 1604754 - 1605086 + | hypothetical protein TERM 1772 1605290 - 1605304 + T 73 -6.4 -4.45077 | GGGGTTTTGGCAGCA GGATCA AAG TGGTCC TTTTGGTGGTTTTTA TERM 1773 1605608 - 1605569 - T 72 -11.3 -3.15544 | opp_overlap 1605571 1605595 CCCGACTCCTACCAA GCGGAAGGCCCCGCACC TCCTCC GGCGCAGGGCCTCCCTT GCTAATCTCTTGCTA TERM 1774 1605571 - 1605606 + T 78 -11.7 -3.28003 | opp_overlap 1605569, overlap 1605595 CGACTCCTACCAAGC GGAAGGCCCCGCACC TCCTCC GGCGCAGGGCCTCCC TTGCTAATCTCTTGC TERM 1775 1605714 - 1605690 - T 90 -5 -5.19879 | opp_overlap 1605690, overlap 1605692 GGTGAAACAGAAAAA CCCGCAAA GCCTTGATT TTCGCGGG TTTACGCTTGCCTGT Daud_1522 1606810 - 1605878 - | L-lactate dehydrogenase Daud_1523 1607563 - 1607099 - | hypothetical protein TERM 1776 1607606 - 1607566 - H 86 -10.6 -4.08767 | GGTACCGCTTCAAAA CACCCACCCTGTAATATT TTACC AATACTACAGTGTCGGTG CTACCACATAAAAAC TERM 1777 1607831 - 1607794 - H 70 -9.1 -3.75897 | opp_overlap 1607794 AATCCCGAAGCCAAA CAGGAACTCCAGAAGGC CTGC GCCTCCCTGAATGCCTG TTTGCAGGAGTGCCG Daud_1524 1607917 - 1608096 + | hypothetical protein Daud_1525 1608648 - 1608400 - | hypothetical protein Daud_1526 1609114 - 1608632 - | hypothetical protein TERM 1778 1608727 - 1608776 + g 73 -8.3 -4.07568 | opp_overlap 1608706 1608746, overlap 1608728 1608765 TCTTTGGTTCCTGAC CCGCGCCGCCGATCTCAAATACG AGGT CGTATCCGTGGCCGGAGGCGCGC TTTTGCGGCCGCCAG TERM 1779 1608994 - 1608979 - G 74 -2.4 -4.88736 | opp_overlap 1608988, overlap 1608980 CATGATCCAGAAAAA CGCCGC CACT ACCGCG ACCAGCAGTATGATT Daud_1527 1610570 - 1609152 - | hypothetical protein TERM 1780 1609302 - 1609314 + g 74 -4.8 -4.67353 | CAGTTGGATTGCCTC GGCT CCGAC AGCC TTTTTCAGTAGGTCG TERM 1781 1610590 - 1610612 + H 100 -13.4 -4.1721 | overlap 1610591 CTCCTTTGGCGGGGA GGGCTTCCCC TCA GGGGAAGCCG TTTTGAGGTCTCACT TERM 1782 1610591 - 1610611 + H 100 -16.9 -3.09844 | overlap 1610590 TCCTTTGGCGGGGAG GGCTTCCCC TCA GGGGAAGCC GTTTTGAGGTCTCAC TERM 1783 1610694 - 1610682 - g 71 -6.2 -4.28774 | opp_overlap 1610681 1610682 TCACTCAATGCAAAA CCCC GAAAA GGGG CTTTCTTGTTCCCTT Daud_1528 1610615 - 1610992 + | hypothetical protein TERM 1784 1611003 - 1611061 + T 100 -18.2 -3.16336 | gap 3, opp_overlap 1611017, overlap 1611018 1611044 1611056 GGTAGGCTACTGCCG GCCGGACGAGCAAAGCCGGCGCCCCCGGT TTAG ACCGGGGACGCCGGCGT-G-TGG-CCGGC GTTTTGGCTTGCGCT TERM 1785 1611050 - 1611017 - T 100 -27.5 -3.78775 | opp_overlap 1611003 1611018 1611044 GGCCGGACGAGCAAA GCCGGCGCCCCCGGT TTAG ACCGGGGACGCCGGC GTGTGGCCGGCGTTT TERM 1786 1611044 - 1611062 + T 100 -13.1 -4.2803 | opp_overlap 1611017, overlap 1611003 1611056 GGTTTAGACCGGGGA CGCCGGC GTGTG GCCGGCG TTTTGGCTTGCGCTG Daud_1529 1611266 - 1611087 - | hypothetical protein TERM 1787 1611176 - 1611186 + g 82 -3.2 -5.1286 | CCCAGGTGCGGGAGA TGAC GTT GTCG TTTTTGTCCTTTTTA TERM 1788 1611803 - 1611828 + G 73 -11.1 -3.62597 | gap 1 ACCGGGAACCGCATT CCGCCGAGCAGG AGG CCTGC-CGGCAG TTGTTGAAGGATGAG Daud_1530 1611439 - 1612152 + | phage SPO1 DNA polymerase-related protein Daud_1531 1614569 - 1613064 - | glutamyl-tRNA synthetase TERM 1789 1613201 - 1613180 - G 74 -2.1 -4.82667 | gap 1, overlap 1613181 1613182 CGATGATATCAAAAA GCCCCGGCCC CAC GGTCCGGC-C GGACAGCGCCAGCCT TERM 1790 1613327 - 1613349 + g 79 -11.2 -3.85698 | opp_overlap 1613316 1613301 1613326 1613325 GCAATCGGGACAAGG CGTCCCGGCC CCG GGCCAGGATG TTTGTCACCCCCGGC TERM 1791 1614112 - 1614132 + g 72 -13.9 -2.82623 | overlap 1614109 ATTTTCACGCGTAGT GCCGGCCGG ATG CCGGCCGCC TCCTTCTCCCGCCGC Daud_1532 1615248 - 1614721 - | methylated-DNA--protein-cysteine methyltransferase Daud_1533 1617488 - 1615323 - | Amylo-alpha-1,6-glucosidase TERM 1792 1617313 - 1617293 - G 76 -11.2 -3.78775 | opp_overlap 1617297 GGGTGGATGAGGAAA GCAACACC GGTCG GGTGTTGC TGATGAAATGCTCCA TERM 1793 1617353 - 1617343 - G 77 -2.4 -5.05782 | AGGCAGCTCAAAAAA CGGG TGT CCTG GTAGTACAGGCCCAG Daud_1534 1618716 - 1617481 - | glycosyl transferase, group 1 TERM 1794 1618211 - 1618169 - G 100 -18.4 -4.08216 | CCAGCCGGGGTAAAA CGCTCCAGGTCCATGCCGTG GTG CACGACGTGGACCCGGGACG CCTGAAACCCATTCT TERM 1795 1619056 - 1619079 + G 75 -3.1 -4.8622 | gap 1, opp_overlap 1619060, overlap 1619059 1619060 CTGCTGGTGGGAATT GAAAC-GGCG GACGA CGCCGGTGTC TTTTTGATTAACGAC Daud_1535 1619008 - 1619994 + | selenide, water dikinase Daud_1536 1620583 - 1620191 - | dinitrogenase iron-molybdenum cofactor biosynthesis Daud_1537 1621667 - 1620804 - | cobyrinic acid a,c-diamide synthase Daud_1538 1622028 - 1621654 - | hypothetical protein Daud_1539 1622320 - 1622075 - | hypothetical protein TERM 1796 1622564 - 1622538 - R 100 -18 -5.55769 | opp_overlap 1622538 GCCCACAAGAAAAAA CCCCCGCCGG TTTCCCG CCGGCGGGGG TTTTTGTGTTGCGCC TERM 1797 1622538 - 1622564 + r 100 -18.7 -5.0916 | opp_overlap 1622538 GCCCACAAGAAAAAA CCCCCGCCGGT TTCCC GCCGGCGGGGG TTTTTGTGTTGCGCC Daud_1540 1623561 - 1622827 - | ABC transporter related Daud_1541 1624211 - 1623558 - | binding-protein-dependent transport systems inner membrane component TERM 1798 1624083 - 1624064 - G 100 -10.6 -4.98522 | AAGTGTAGAGAAAAA GCGCGGGC AAGC GCACGCGC CGGGCAGGCTGCATA Daud_1542 1625196 - 1624345 - | extracellular solute-binding protein TERM 1799 1625231 - 1625241 + r 77 -8.2 -4.07568 | opp_overlap 1625218, overlap 1625211 CAGGGGCTCGGAGCA CCCG GAT CGGG TTTTCCACAACGAAA TERM 1800 1625287 - 1625259 - R 100 -8.7 -4.93365 | TTCCACAACGAAAAA CCGGGCCGCGC GGAAAGA GCCGGGCCCGG TCATCCCAACCGGAA Daud_1543 1628014 - 1625417 - | peptidase S16, lon domain-containing protein TERM 1801 1627851 - 1627801 - G 74 -2.5 -4.82901 | gap 1, overlap 1627809 GTCCGGCCACAAAAA CGTTGAAA-CCCTGCTCCTTGATC CCCA GACCGAAGTGCAGGGCTCTGACCG CCCGTTCCTGACCGA TERM 1802 1627842 - 1627809 - G 71 -9.5 -3.69455 | overlap 1627801 ACAAAAACGTTGAAA CCCTGCTCCTTGATC CCCA GACCGAAGTGCAGGG CTCTGACCGCCCGTT Daud_1544 1630545 - 1628056 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 1803 1628908 - 1628925 + g 78 -6.3 -4.56597 | gap 1, opp_overlap 1628908 GCCCCGCTTGATCAA CTGCTGCA CGA TGC-GCAG TTTTTGCAGGGGCGC TERM 1804 1630233 - 1630260 + g 74 -9 -3.90112 | GGTCCCCCAGGGCAA GGCGCTCCGCCG CCAG CGGCCGAACGTC TTTGCTTGCGCCCAG TERM 1805 1631095 - 1631111 + H 86 -3.5 -5.4251 | overlap 1631097 GGCAAAGTCACCACG CCACCCC CTT GGGGACG TTTTTTCTCTATAAC TERM 1806 1631127 - 1631138 + H 74 -7.2 -4.07568 | opp_overlap 1631127 1631126 TTTTTTCTCTATAAC CGCG GTTA CGCG TTTTGGAGCCAGCGC TERM 1807 1631272 - 1631311 + H 73 -5.6 -4.57073 | gap 1, overlap 1631255 GGGGCAGCCGGTCAG CCACGGTTGCGTCCGCTTG AGC CTGGCCGACGCGAA-GTGG TTTTTCCACCACGTG TERM 1808 1631857 - 1631889 + G 74 -9.2 -3.85698 | gap 2, overlap 1631883 1631886 ATCGGCAAGCCCATC GGCGAGCTG-T-CCGG CGG CCAGCAGCAGCTCGCC TTTCTGGGCCGGGCG TERM 1809 1631897 - 1631923 + G 95 -10 -4.48987 | overlap 1631883 1631886 AGCTCGCCTTTCTGG GCCGGGCGTTGT GCA GCCACACCCGGC TTTTGATTCTCGACG TERM 1810 1632133 - 1632088 - g 75 -11.7 -3.5393 | gap 1 ATGATCTGTTTGAAA GGCTC-CGTGCACGCCCGGGGC ACC GCCCGGGAAGTGCTGGCGAGCC CTGGGCTGGCTGAGG Daud_1546 1631446 - 1632192 + | ABC transporter related TERM 1811 1632531 - 1632543 + G 86 -7.7 -4.68724 | overlap 1632517 1632514 CTCCGGGCTATCAGC CCGAA CTC TTCGG TTTTCTCTTCGGTAA TERM 1812 1632574 - 1632622 + G 80 -5.8 -4.7153 | overlap 1632576 1632577 1632579 CATCCTGGCGGTCAC CCCCGCGGACATCGTCCTGCTC ACCGC GAGTGGGGCGGTGATCGTGCTG TTTTTAACCTTCTTT TERM 1813 1632682 - 1632703 + G 76 -9.3 -4.08706 | opp_overlap 1632673 TGAAGAGTCGGCCCG GGCCGCCGG CATC CCGGTGACC TTTCTGTACTACGCC Daud_1547 1632194 - 1633033 + | ABC-3 protein Daud_1548 1634890 - 1633043 - | hydrogenase, Fe-only TERM 1814 1635103 - 1635077 - R 76 -12.4 -3.03899 | opp_overlap 1635084, overlap 1635084 TAAAAGTCAAAGAAG GTAAAAAGGGGC CTG GCCCCTTTTTAA GGAGCGGTCGCCCCC TERM 1815 1635084 - 1635096 + r 95 -10.5 -4.56775 | opp_overlap 1635084 1635077 CAAAGAAGGTAAAAA GGGGC CTG GCCCC TTTTTAAGGAGCGGT TERM 1816 1635096 - 1635084 - R 100 -10.5 -4.8384 | opp_overlap 1635084, overlap 1635077 CAAAGAAGGTAAAAA GGGGC CTG GCCCC TTTTTAAGGAGCGGT Daud_1549 1635690 - 1635208 - | iron dependent repressor TERM 1817 1635929 - 1635906 - R 100 -11.8 -4.63932 | gap 1, overlap 1635908 CAGTCCGCAACAAAA GAGGGGTTGCT TGG AGCAACCCC-C TGATACCAAACCTCA TERM 1818 1635928 - 1635908 - R 100 -15.5 -3.93367 | overlap 1635906 GTCCGCAACAAAAGA GGGGTTGCT TGG AGCAACCCC CTGATACCAAACCTC TERM 1819 1635945 - 1635963 + r 90 -5.2 -5.19328 | TGATACCAAACCTCA GTCTCGCA CAT TGCCGGAC TTTTTATTCTGCCCT TERM 1820 1635981 - 1635995 + r 100 -5.6 -5.46698 | overlap 1635972 TTTATTCTGCCCTGT CCCGGA AAG TGCGGG TTTTTTCCTTTTCCC TERM 1821 1636191 - 1636214 + r 74 -10.2 -3.55622 | gap 1, opp_overlap 1636180 1636179 GAAGTCCGCGCCCAC CGACCCGGCGG CGG CCGCGGGG-CG TTTCGCCCGATTGAA Daud_1550 1638164 - 1636173 - | small GTP-binding protein TERM 1822 1636290 - 1636254 - G 76 -12.9 -3.44622 | opp_overlap 1636254 1636274 1636275 1636277 1636281, overlap 1636272 CATCCCTACAATCAA CCCCCCGATGGCAGCGA AGG CCGCCACCACCAGGGCG GTGTTGGTCGTTCCG TERM 1823 1636688 - 1636705 + g 74 -2.7 -4.91429 | gap 1 ATAGCGGGGTGGCCT CTTTCAGG AAG CC-GAAGG TTTTGTTTACCGTTT TERM 1824 1637250 - 1637228 - G 76 -8.4 -4.12188 | opp_overlap 1637247, overlap 1637247 GGATCACGCCCAAAA CCGATTCCTC GCT GATGAACCGG CCGACCAGACCGCTG TERM 1825 1638213 - 1638234 + r 72 -11.5 -3.14211 | opp_overlap 1638215, overlap 1638215 TTGCCTTGAACACGA AAGCCGGGC CCTT GCCCGGCTG TTCATCCACCGCGGT TERM 1826 1638232 - 1638215 - R 100 -14.1 -3.92324 | opp_overlap 1638213 1638215 GCCTTGAACACGAAA GCCGGGC CCTT GCCCGGC TGTTCATCCACCGCG TERM 1827 1638215 - 1638232 + r 91 -14.1 -3.13403 | opp_overlap 1638215, overlap 1638213 GCCTTGAACACGAAA GCCGGGC CCTT GCCCGGC TGTTCATCCACCGCG Daud_1551 1638478 - 1638254 - | FeoA family protein Daud_1552 1639737 - 1638559 - | YibE/F family protein TERM 1828 1639845 - 1639824 - R 70 -5 -4.48987 | opp_overlap 1639824 1639824, overlap 1639825 TTTTCACAACGAAAA CGGCGCCC GTAAAG AGGCGCCC GTTTGCCGGATAGAT Daud_1553 1640972 - 1639908 - | hypothetical protein TERM 1829 1640726 - 1640765 + g 71 -8.5 -3.87075 | gap 1, overlap 1640704 CGGCGTACAGGGACT TCCAGTCCGGCGCCGGAA CTCCT TGCCGG-GCCGGGTCGGA TTTATCCCCGGTCCT Daud_1554 1641174 - 1641521 + | hypothetical protein Daud_1555 1641699 - 1641953 + | hypothetical protein TERM 1830 1642268 - 1642247 - T 100 -11.5 -5.35224 | opp_overlap 1642247 GGCATAAAAAGAAAA CCCGGCGGT TTAC ACCGTCGGG TTATGAGCTTTTCAA TERM 1831 1642247 - 1642268 + T 88 -13.7 -3.42366 | opp_overlap 1642247 GGCATAAAAAGAAAA CCCGGCGGT TTAC ACCGTCGGG TTATGAGCTTTTCAA Daud_1556 1642646 - 1642290 - | hypothetical protein Daud_1557 1643068 - 1642613 - | BadM/Rrf2 family transcriptional regulator Daud_1558 1643407 - 1643213 - | hypothetical protein TERM 1832 1643282 - 1643255 - G 73 -7 -4.30719 | overlap 1643256 TCTGCGGAGAACAAA CGTCAGTATCAG GCTG CCGATACCGACT ACCAGGAACACCAGG TERM 1833 1643443 - 1643432 - H 74 -7.2 -4.07568 | TCCCCCGGGCTAAAA CCGG ATTG CCGG ACTGATCTTACATGC Daud_1559 1643772 - 1644707 + | TGS domain-containing protein Daud_1560 1645247 - 1644807 - | putative CheW protein Daud_1561 1646846 - 1645260 - | methyl-accepting chemotaxis sensory transducer TERM 1834 1647048 - 1647025 - R 88 -9.6 -4.48987 | opp_overlap 1647029 TTTGCACAAGGAAAA GGGGCGAA CTGTTCGT TTCGCCCC TCGAAGCTCACGGTC Daud_1562 1647745 - 1647101 - | heat domain-containing protein TERM 1835 1647661 - 1647645 - G 81 -3.7 -5.00616 | opp_overlap 1647659 CGGTTGTCCAAAAAA GTCAC CAGGTGC GTGAC CACTTCCGGGTCTTC TERM 1836 1648797 - 1648816 + G 71 -8.6 -3.85698 | gap 1, opp_overlap 1648787 CAAGACCGAGGGGCT GGACGC-CT CCC AGTGCGTCC TTTATCGGGCCGCCA Daud_1563 1648000 - 1649565 + | phosphoenolpyruvate carboxykinase (ATP) TERM 1837 1649622 - 1649605 - T 71 -10.5 -3.28712 | overlap 1649606 GCGCCCCCCGCACAA CCGCCGG CTCT CCGGCAG CCGGCGCAAACGCAT TERM 1838 1649628 - 1649606 - T 72 -12 -2.57132 | overlap 1649605 CGCCCCCCGCACAAC CGCCGGCT CTCCGGC AGCCGGCG CAAACGCATCAGGAA Daud_1564 1650786 - 1649584 - | major facilitator transporter TERM 1839 1650063 - 1650047 - G 72 -2.2 -4.70266 | AAGACCACCGAAAAA GCGG TAAGGGTGG CCGC CAGGGAAACCGCCGC TERM 1840 1650358 - 1650337 - G 81 -7.3 -4.39696 | gap 1, overlap 1650343 GGCCAAAGCAACAAA CAAGTAGGCG GTC CGCC-ACTCG AAAAACCCGAGCAGC TERM 1841 1650974 - 1650992 + r 100 -16 -4.59109 | opp_overlap 1650949 1650971 TTTTGAGGAAATCCG GGCCGCCT GCC AGGCGGCC TTTTTCCGGGCTATC Daud_1565 1652166 - 1651006 - | hypothetical protein TERM 1842 1651297 - 1651275 - G 70 -9.8 -3.56092 | overlap 1651243 1651276 TCAGGAGCCCGGAAA CCGCCGGG TTAACCC CCCGGCGA TTCACGCCCCGCCCT Daud_1566 1653102 - 1652347 - | copper amine oxidase domain-containing protein TERM 1843 1653204 - 1653183 - R 100 -10.1 -4.98436 | opp_overlap 1653183 1653194 GGAACACCAGAAAAA CCACGCCCG TTCC CGAACGTGG TTCTGGTTTTGCACA TERM 1844 1653194 - 1653210 + r 70 -6.5 -4.07568 | opp_overlap 1653183, overlap 1653183 AAAACCACGCCCGTT CCCGAAC GTG GTTCTGG TTTTGCACAAGCAAG Daud_1567 1653956 - 1653246 - | DNA-directed DNA polymerase Daud_1568 1655877 - 1653973 - | cyclic nucleotide-binding protein TERM 1845 1654416 - 1654428 + g 74 -4.7 -4.57073 | opp_overlap 1654416 GGGCCATAAAATGCA GCACC ACC GGCGC TTTTTCCAGCCGCTG TERM 1846 1655526 - 1655512 - G 76 -5.6 -4.65895 | overlap 1655513 1655521 1655522 CGCGTGACTGAAAAA GCCGAC GAA GTCGGG ATCCGACTTCAGATC TERM 1847 1655967 - 1655934 - R 100 -23.3 -5.04385 | opp_overlap 1655934 CACACTTTTAAAAAA GGGGTCAGACCCCCT TAAA AAGGGGTCTGACCCC TTTTTAAGGCCGCGG TERM 1848 1655934 - 1655967 + r 100 -21.1 -4.56597 | opp_overlap 1655934 CACACTTTTAAAAAA GGGGTCAGACCCCCT TAAA AAGGGGTCTGACCCC TTTTTAAGGCCGCGG TERM 1849 1656001 - 1656017 + r 74 -4.3 -4.70169 | opp_overlap 1656001 CCTCGAACGATACCA GCCAGCG AAA CGTTTGC TTTTCTTCCCTATCC Daud_1569 1656384 - 1656220 - | hypothetical protein Daud_1570 1658525 - 1656444 - | Na+/solute symporter TERM 1850 1656945 - 1656955 + g 86 -8.2 -4.65078 | overlap 1656927 CTTGATCCGCTGCCC GGGC GTG GCCC TTTTGTTGAGCATGT TERM 1851 1657536 - 1657566 + g 73 -8.2 -3.96624 | opp_overlap 1657543 1657556 CTTCTCCTTGCGGGT CGAAGGATCGGTGA CAA TCACCGGTTCACCG TTTCTGGTCACGGTG TERM 1852 1658179 - 1658153 - G 71 -5.7 -4.30576 | overlap 1658154 TGGTCAGCACGAAAA CCACCGCGATC TTCCG GAACGCGGCGC TCGAATACCGGCCCT Daud_1571 1658886 - 1658518 - | hypothetical protein TERM 1853 1658992 - 1659009 + r 77 -8.3 -4.07568 | CCGGCTATGGTTGGC GGCGGCC TGCA GACCGCC TTTTCCCGGGAAACC Daud_1572 1661107 - 1659125 - | acetate--CoA ligase TERM 1854 1661286 - 1661261 - H 76 -8.9 -3.92522 | GCCCAACGGTAGAAA GCCGAAGGCGA ATGG TCGCCTGCGCC GGGCGAACGGCCGGG TERM 1855 1661979 - 1662004 + G 85 -10.3 -4.3208 | opp_overlap 1661967, overlap 1661980 GAACGGGCTGGACCC CGCCCGGCTGG GACT CCGGCTGGGCC TTTTCGGTTCTGAGC TERM 1856 1661980 - 1662003 + G 76 -13.8 -3.18766 | opp_overlap 1661967, overlap 1661979 AACGGGCTGGACCCC GCCCGGCTGG GACT CCGGCTGGGC CTTTTCGGTTCTGAG Daud_1573 1661386 - 1662681 + | phenylacetate--CoA ligase Daud_1574 1662808 - 1664133 + | phenylacetate--CoA ligase Daud_1575 1664137 - 1664568 + | amino acid-binding ACT domain-containing protein Daud_1576 1664589 - 1664708 + | desulfoferrodoxin Dfx domain-containing protein TERM 1857 1664734 - 1664770 + T 100 -19.6 -3.8381 | gap 1, opp_overlap 1664720 1664730 ACGGGCATACACGCG CAGGCCGGGCC-TGACT GTGT AGTCAAGGTCCGGCCTG TTTGATCATATCTAT Daud_1577 1665655 - 1664807 - | putative formate dehydrogenase formation protein TERM 1858 1665786 - 1665765 - R 100 -18.7 -4.18044 | TGAGAAAGAAGGAAA CCGGGGGGC TTTC GCCCCCCGG CCATCTGCGAAAAAG TERM 1859 1665811 - 1665823 + r 100 -7.7 -5.16237 | opp_overlap 1665811 AAAAAGGTGGAAAAA GGTGT CTG ACACC TTTTTTGCTAGGCTT TERM 1860 1665823 - 1665811 - R 83 -7.7 -4.67168 | opp_overlap 1665811 AAAAAGGTGGAAAAA GGTGT CTG ACACC TTTTTTGCTAGGCTT Daud_1578 1667015 - 1665831 - | putative hydrogenase cytochrome b subunit TERM 1861 1666959 - 1666947 - G 76 -9.1 -4.10178 | GAAGAAGACGAGAAA GGCCA GCA TGGCC CAGCGGAGCGGGGTC Daud_1579 1667846 - 1667058 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 1862 1667925 - 1667964 + r 86 -9.8 -4.28254 | gap 1 GTCGTAGATGGCCCG GGCCCGGGTCCGCGGCGCC GGA GGCGC-GCCGGCCTTGACC TTTTCGATGTTGCAC Daud_1580 1670330 - 1667904 - | formate dehydrogenase Daud_1581 1670993 - 1670343 - | formate dehydrogenase TERM 1863 1671338 - 1671303 - R 72 -11.8 -2.71483 | opp_overlap 1671302 ACACCGTCGCAACTA CTCCAGGTACACCGGC TCAC GCCGATGCCCTTGGAG ATACTTTTACAAACC Daud_1582 1672641 - 1671319 - | transposase, IS605 OrfB Daud_1583 1673049 - 1672654 - | transposase IS200-family protein TERM 1864 1673103 - 1673071 - R 100 -15.1 -4.39287 | opp_overlap 1673069 CTAAGTATACCAAAA TTTTTGCCGGGAA ACAAGCG TTCCCGGCAAAAA GCTGCTTTCCTCCCG TERM 1865 1673115 - 1673136 + r 100 -18.7 -3.01791 | overlap 1673129 AAAAGCTGCTTTCCT CCCGCCCCC TGAA GGGGGCGGG TCTTCCCGCAGCGAT Daud_1584 1673657 - 1673169 - | hypothetical protein TERM 1866 1673879 - 1673863 - R 81 -6.5 -4.7254 | opp_overlap 1673865, overlap 1673865 AGCTTGGAGGAAAAA GAGGGGT CTG ACCCCTT TTCCGGCTGCGTCAG TERM 1867 1673865 - 1673877 + r 80 -9.1 -4.11692 | opp_overlap 1673863 1673865 CTTGGAGGAAAAAGA GGGGT CTG ACCCC TTTTCCGGCTGCGTC TERM 1868 1673877 - 1673865 - R 76 -9.1 -3.98256 | opp_overlap 1673865, overlap 1673863 CTTGGAGGAAAAAGA GGGGT CTG ACCCC TTTTCCGGCTGCGTC Daud_1585 1674535 - 1673891 - | CoA-binding domain-containing protein Daud_1586 1675313 - 1674654 - | ribulose-phosphate 3-epimerase Daud_1587 1676191 - 1675310 - | ribosome small subunit-dependent GTPase A TERM 1869 1675569 - 1675542 - G 75 -4 -4.74706 | gap 1, overlap 1675532 1675543 1675544 CGCAACACCGAAAAA CCGGGGGCGTCGG CCA CCCA-ACCCCCGC CTTCCAGTGCCAGCA TERM 1870 1675789 - 1675755 - G 75 -13.5 -3.02511 | CGGAGTGCCGCAACA CCCTCTCCGGTGACC GCGCT GGTCACCAGCGTGGG ATACCCTGCATCCCG Daud_1588 1678061 - 1676247 - | protein kinase Daud_1589 1678780 - 1678067 - | protein phosphatase 2C domain-containing protein Daud_1590 1679742 - 1678786 - | radical SAM protein TERM 1871 1678916 - 1678946 + g 83 -14.6 -3.53091 | opp_overlap 1678899 1678900, overlap 1678917 CGCCGGAAGGTCCGG ACGGCTTCCGGGCT AGG GGCCCGGTAGCCGC TTTCCGGCACCGGGT TERM 1872 1678917 - 1678945 + g 86 -18.1 -2.71712 | opp_overlap 1678899 1678900, overlap 1678916 GCCGGAAGGTCCGGA CGGCTTCCGGGCT AGG GGCCCGGTAGCCG CTTTCCGGCACCGGG TERM 1873 1679777 - 1679730 - G 70 -7.6 -4.07568 | gap 1 CCCCCTGTTTGAAAA CCCATT-CGGCCAACTGCCGCGC CCG GTACCGCGGTTCGCCGTAACGGG CCGTCAGCGCTTCCA Daud_1591 1681249 - 1679891 - | sun protein TERM 1874 1680909 - 1680897 - GR 71 -6.2 -4.37092 | opp_overlap 1680900 ACCCCGTTCACAAAA CGGG CCGTC CCCG GGGTGCCGTATTTCT Daud_1592 1682243 - 1681164 - | methionyl-tRNA formyltransferase Daud_1593 1682704 - 1682240 - | peptide deformylase Daud_1594 1685101 - 1682894 - | primosomal protein N' TERM 1875 1684069 - 1684057 - GR 74 -10.5 -3.53444 | overlap 1684058 CCACCGCCTTCGAAA GCGCG GCC CGCGC CCGGACCACGTCCCC TERM 1876 1684766 - 1684791 + gr 75 -12.6 -2.52543 | gap 1 TTCCTCGTAACGCGG TC-CCGCCCCG CGCGA CGGGGCGGCGA TACATTGCAGGGCCT Daud_1595 1686306 - 1685074 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 1877 1686271 - 1686289 + gr 83 -7.4 -4.56597 | overlap 1686272 GGCGGCGATACTTCC CGTGATCC CCA GGATCACC TTTTTCCCGGCCAGC TERM 1878 1686272 - 1686288 + gr 73 -10.9 -3.33744 | overlap 1686271 GCGGCGATACTTCCC GTGATCC CCA GGATCAC CTTTTTCCCGGCCAG Daud_1596 1686576 - 1686367 - | DNA-directed RNA polymerase, omega subunit Daud_1597 1687227 - 1686634 - | guanylate kinase Daud_1598 1687530 - 1687243 - | hypothetical protein Daud_1599 1688427 - 1687549 - | hypothetical protein TERM 1879 1687923 - 1687943 + g 70 -10.4 -3.53811 | opp_overlap 1687911 1687923 AGATGGCCTCAACCA GGGTGGCC AACCG GGTCACCC TTTCCGCCAAGTCGG TERM 1880 1688546 - 1688519 - R 89 -2.7 -5.50774 | TACAACAAAGAAAAA GTACGGTTTTT AACGTG AAATGCCGTAC TTACGATTATTTTTA Daud_1600 1689180 - 1688599 - | hypothetical protein TERM 1881 1688742 - 1688766 + g 84 -4.2 -5.24129 | gap 1, opp_overlap 1688721 1688719, overlap 1688721 1688730 1688742 1688754 ACGGCCGGTTCGGCT CC-CCGGCCTT ATCC GAAGCCGGCGG TTTTTTCTCCACCGG TERM 1882 1689275 - 1689258 - R 100 -12.7 -4.5187 | opp_overlap 1689254 GGGAAAAAAAGGAAA GAGCCCC GGAG GGGGCTC AAGCTTCCTCGCGAT Daud_1601 1689549 - 1689274 - | hypothetical protein Daud_1602 1691176 - 1689983 - | aminotransferase, class I and II Daud_1603 1692397 - 1691219 - | aminotransferase, class I and II TERM 1883 1691337 - 1691359 + g 78 -6.9 -4.56775 | overlap 1691338 GTACCGTAGCCGGTG CCGGGGGTG ATAAC CACTCCCGC TTTTTCCAGGACCAT TERM 1884 1691864 - 1691837 - G 74 -4.6 -4.57073 | opp_overlap 1691838 1691854, overlap 1691839 CACCCGGGCGAAAAA CTCCTTCGAGGC GACC GCCCCGGTGGGG TTGTTCGGGTAGTTG Daud_1604 1693317 - 1692481 - | diaminopimelate epimerase Daud_1605 1694435 - 1693329 - | peptidase T-like protein TERM 1885 1694078 - 1694039 - G 83 -6.3 -4.88918 | gap 1 CGACCGTAAACAAAA GTTCCAGGGGCAGCGCGG GCAGT CCGCGTT-CCCCGAGCAC CCGCACGACCTCCAA TERM 1886 1694240 - 1694220 - G 70 -7.5 -4.07885 | overlap 1694225 CATGTGGGCGCAAAA CAGGATGGT GGG ACCCTCCCG GGTGCCCGCCCGAAA Daud_1606 1695006 - 1694428 - | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 1887 1694763 - 1694739 - G 71 -9.1 -3.7511 | opp_overlap 1694739 1694735, overlap 1694740 TGTTGTACAAGATAA CGCCCCCCGGC ACC ACCGCGGGGCC GTACTTCTCAAGGGA TERM 1888 1694762 - 1694740 - G 70 -12.6 -2.84745 | opp_overlap 1694739 1694735, overlap 1694739 GTTGTACAAGATAAC GCCCCCCGGC ACC ACCGCGGGGC CGTACTTCTCAAGGG Daud_1607 1695672 - 1695007 - | thiamine pyrophosphate binding domain-containing protein TERM 1889 1695306 - 1695335 + g 76 -6.4 -4.4009 | gap 1 GCATGCCGGTGTTTT CCACGTCCCGCCC GAACG GGGTGGTA-GTGG TTTTCTGCCCTACCA Daud_1608 1696822 - 1695719 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 1890 1695829 - 1695851 + g 70 -9.9 -3.57561 | gap 1, opp_overlap 1695843 GCACCGTTCCGCCGG GCCGG-CCAT AGAA ATGGACCGGC TTTCGCCCGTTCACG TERM 1891 1695952 - 1695920 - G 70 -12 -3.23216 | gap 1 CTCGACCACCAGGAA GCCGTCCACCCGAGC CGCG GCCCGGCTG-ACGGC GTCGTCCGGAAAAGG TERM 1892 1696214 - 1696264 + g 86 -13.3 -3.99324 | gap 2 GATGTTCCGCTCCGG CCGGTCTCCCTGCCCGGTGACGGCC CAG GGTT-TC-TCGGGCAGGATGACCGG TTTCTCCTCGTGCAC Daud_1609 1697054 - 1696812 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_1610 1697772 - 1697077 - | hypothetical protein TERM 1893 1697405 - 1697388 - G 100 -3.3 -5.9873 | TGACGACAAAAAAAA CGGCATA CTGT TCCGCCG GCAAAAAAGGTCGAA TERM 1894 1697427 - 1697414 - G 81 -3.7 -5.00616 | overlap 1697422 TCCGCCGGCAAAAAA GGTCG AAAG CGGCC CAGTACCCGGGCGCC Daud_1611 1698618 - 1697776 - | hypothetical protein TERM 1895 1698586 - 1698574 - G 100 -10.5 -5.27923 | overlap 1698576 TAAGGGGAGAAAAAA GGCGG CCG CCGCC AGCCCTAACGTGAAG Daud_1612 1699320 - 1698625 - | glycosyl transferase family protein TERM 1896 1698873 - 1698887 + g 71 -9.2 -3.70902 | GCCGCACCGCCCGCT GCCCGG AGA TCGGGC TTTCCATCTCCAGCC Daud_1613 1700201 - 1699335 - | hypothetical protein Daud_1614 1701340 - 1700213 - | thiamin pyrophosphokinase, catalytic region TERM 1897 1701448 - 1701429 - R 100 -7.1 -5.4505 | opp_overlap 1701429 TTTCTCAATAAAAAA CCTGGCG TTGTGC CACCAGG TTTACAAGCAGTATT Daud_1615 1702245 - 1701475 - | response regulator receiver protein Daud_1616 1703730 - 1702408 - | peptidase S55, SpoIVB Daud_1617 1705853 - 1703835 - | DNA ligase, NAD-dependent TERM 1898 1704659 - 1704671 + g 78 -6.9 -4.64766 | TGGCGAAAGGAGTTT CGCGC CCG GTGCG TTTTTCGGGTCTGGA Daud_1618 1706886 - 1706011 - | hypothetical protein TERM 1899 1706805 - 1706772 - G 70 -7.3 -4.01411 | gap 1 TATTAAAAAGCGAAA TCGCGGTGGCCAGGCG CCG CGTCTGGACCCCG-GA CAGGCGCACCCCGTA TERM 1900 1707031 - 1707019 - R 100 -10.5 -5.28481 | opp_overlap 1707019 CAGCGAATGAAAAAA GGGGC CAG GCCCC TTTTTGATCCAGTTC TERM 1901 1707019 - 1707031 + r 100 -10.5 -4.74801 | opp_overlap 1707019 CAGCGAATGAAAAAA GGGGC CAG GCCCC TTTTTGATCCAGTTC Daud_1619 1709219 - 1707063 - | ATP-dependent DNA helicase PcrA TERM 1902 1708716 - 1708758 + g 80 -5.4 -4.85599 | overlap 1708717 1708718 CAGTTCCTGGTGCTG GTCGTAGG-CGGCCCCGGCG AACTC CGCCGGG-CCGACCAGCGCG TTTTTCTGCCATGAG TERM 1903 1709774 - 1709759 - g 72 -3.9 -4.56597 | overlap 1709760 TTGCCCGTGGAAAAA CGAGC CCCGGT GCCCG GCCTCCTGGAGATCA Daud_1620 1709498 - 1710022 + | redox-active disulfide protein 2 TERM 1904 1710048 - 1710080 + T 71 -4.7 -4.5442 | gap 1, opp_overlap 1710033 1710031, overlap 1710046 CGGTTCCGGAAGCGC CGG-GCGAGGGGGC ACGCCC GCCTCCCCCCACCG TTTTCTACTTCCGCC Daud_1621 1710819 - 1710085 - | phosphoribosyl-AMP cyclohydrolase TERM 1905 1710392 - 1710405 + g 81 -3.7 -5.06451 | overlap 1710393 TCCTCCTCGCTTAGC ACCCG CTTA CGGGG TTTTTTGACCTCGTC Daud_1622 1711672 - 1710914 - | imidazoleglycerol phosphate synthase, cyclase subunit Daud_1623 1712405 - 1711617 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 1906 1712371 - 1712357 - GR 78 -7.1 -4.56597 | CGCGCCCCTGAAAAA GCCGT ACACA ACGGC CCCCGCGCAGGTCTA Daud_1624 1713022 - 1712405 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 1907 1712665 - 1712645 - G 72 -3.9 -4.59853 | overlap 1712662 GGAACCGCGGAAAAA CACCTGGTT CCA ACCCATGTG CGGCACCTTCACTTC TERM 1908 1712908 - 1712949 + g 73 -11.3 -3.56594 | overlap 1712893 1712921 CGGCCGCCCGGTCCA CCTCCCGCGGGTCGGCCGT GATT ACGGCCGCCCAGCCGGCCG TTTCCAGGCCTTTCA Daud_1625 1713617 - 1713027 - | imidazoleglycerol-phosphate dehydratase TERM 1909 1713281 - 1713264 - G 76 -10.5 -3.83502 | CATCGGCACATCAAA GGCCAGG TACC CCCGGCC GCTGAGGTCGACGGC TERM 1910 1713649 - 1713663 + r 80 -5.6 -4.84363 | TCGATTTTCGCCATC GGCCCT GAA AGGCCC TTTTTACTGGTTTCC Daud_1626 1714761 - 1713694 - | histidinol-phosphate aminotransferase Daud_1627 1716085 - 1714766 - | histidinol dehydrogenase TERM 1911 1714970 - 1714934 - G 73 -8.6 -4.09685 | opp_overlap 1714943, overlap 1714937 CCCGAGGCCGGAAAA GAACCGCGCCGTGCCC CCGGT GGGCAGCACGTGGTTC GGCCCGGCGAGATAA TERM 1912 1716177 - 1716165 - R 100 -10.5 -5.47431 | opp_overlap 1716159 1716165 CGAACACACAAAAAA GGGGC CAG GCCCC TTTTTACTATCTTTG TERM 1913 1716165 - 1716177 + r 100 -10.5 -4.90217 | opp_overlap 1716165, overlap 1716159 CGAACACACAAAAAA GGGGC CAG GCCCC TTTTTACTATCTTTG Daud_1628 1717461 - 1716184 - | phosphoribosylamine--glycine ligase TERM 1914 1716837 - 1716816 - G 72 -4.4 -4.60487 | GATCACCCTCAAAAA CCGGCT TGTGGTCCTG AGCCGG CAGCATGGGACGGAT TERM 1915 1717012 - 1717032 + g 74 -11.8 -3.53012 | opp_overlap 1717002 1717026 CACGATGACCCCCTT GCCGGCGG CCAAA CCGTCGGC TTTGACCACGCACGG TERM 1916 1717363 - 1717397 + g 85 -10 -4.33165 | gap 2, overlap 1717364 1717364 GGCCATCCCCGGATT ACCCG-GGG-CGGCGA TGATT TCGCCGACCCGCGGGC TTTTGCTCAATTTCC TERM 1917 1717364 - 1717395 + g 71 -13.7 -2.50782 | gap 1, overlap 1717363 1717364 GCCATCCCCGGATTA CC-CGGGGCGGCGA TGATT TCGCCGACCCGCGG GCTTTTGCTCAATTT TERM 1918 1717364 - 1717396 + g 76 -13.5 -3.19176 | gap 2, overlap 1717364 1717363 GCCATCCCCGGATTA CCCG-GGG-CGGCGA TGATT TCGCCGACCCGCGGG CTTTTGCTCAATTTC TERM 1919 1717646 - 1717658 + r 100 -10.5 -5.33866 | opp_overlap 1717640 1717646 CAGGGAAAGTAAAAA GGGGC CTG GCCCC TTTTTTGTGGGTTTA TERM 1920 1717658 - 1717646 - R 100 -10.5 -5.00138 | opp_overlap 1717646, overlap 1717640 CAGGGAAAGTAAAAA GGGGC CTG GCCCC TTTTTTGTGGGTTTA Daud_1629 1719212 - 1717671 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1921 1717842 - 1717830 - G 73 -3.3 -4.70879 | overlap 1717821 CGCAAACGGGAAAAA GGCGT CGG ATGCC AGCACGGCGCCCAGA TERM 1922 1718313 - 1718297 - G 74 -12.3 -3.52515 | overlap 1718290 AGTTAAAAGCGACAA TTCCGCC GAA GGCGGAA ACCTCGTCGGCCGCA Daud_1630 1719884 - 1719240 - | phosphoribosylglycinamide formyltransferase Daud_1631 1721044 - 1720001 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 1923 1720235 - 1720198 - G 72 -7.5 -4.12902 | gap 1, overlap 1720199 GAATCAGGCTGAAAA TGCCCGGCACCGGCCAGG TCC CGCGGC-GGAGCCGGACG GCCACGCCCCGGGGC TERM 1924 1720861 - 1720877 + g 86 -12.3 -4.2349 | opp_overlap 1720858 1720861 CGGTTCCGGAAACCA GTACCGG TTC CCGGTAC TTTTCGGTGTCCAGC TERM 1925 1721086 - 1721102 + r 74 -2.1 -5.13648 | opp_overlap 1721086 TATCACAACTAAAAG CAGAACC GAA GGGGCTG TTTTATTTGTATTTA Daud_1632 1722514 - 1721105 - | amidophosphoribosyltransferase Daud_1633 1723256 - 1722522 - | phosphoribosylaminoimidazole-succinocarboxamide synthase Daud_1634 1724570 - 1723272 - | adenylosuccinate lyase Daud_1635 1726355 - 1724814 - | GMP synthase, large subunit Daud_1636 1726957 - 1726385 - | hypoxanthine phosphoribosyltransferase TERM 1926 1726766 - 1726747 - G 86 -13.6 -3.95424 | ATGAGGAAGAGGAAA GGCCGTAG CTGG CTACGGCC ATGAAATCGAAAGAA TERM 1927 1727046 - 1727021 - R 91 -11.8 -4.08571 | overlap 1727012 1727040 TTATAACAGGAGAAA CGCCCGGATG TCAACG CAACCGGGCG CCGGAAGAAGCAGCG Daud_1637 1727848 - 1727135 - | hypothetical protein TERM 1928 1728332 - 1728360 + G 100 -3.8 -5.75945 | gap 2, opp_overlap 1728330 GAACAGGAATTCAGT CTGCG-CGGG-CGG ACG TTGACCCGACGCGG TTTTTTTTGCGCCCT Daud_1638 1728038 - 1729321 + | hypothetical protein TERM 1929 1729456 - 1729498 + F 100 -9.1 -5.84011 | gap 1, opp_overlap 1729456 1729463 CGCAAAACGGATGAA CCATGAAGGTTCCGGCCCGC CGAA GCGGGACAGTAC-TTCGTGG TTTTTGTTTTTTGTT TERM 1930 1729670 - 1729657 - f 78 -2.3 -5.14563 | CTCGGCACGAAAAAA CCACA CTCT TGAGG AGGTAGATAGAAAAT TERM 1931 1730556 - 1730592 + G 73 -12.8 -3.23216 | CACGGCCTGGATGTT GGGCGCCGCCGCGGTG CTGGC CGCCGGGGCTGCGGCC TTCCTGCTCCTGGGC Daud_1639 1729684 - 1730628 + | ABC-type Co2+ transport system periplasmic component-like protein TERM 1932 1730640 - 1730652 + F 78 -6.9 -4.65895 | opp_overlap 1730640 CTAACCTCCGAAAAA GGGGC CAG GCTCC TTTTTGGCTAAGGAA TERM 1933 1730652 - 1730640 - f 71 -4.7 -4.59853 | opp_overlap 1730640 CTAACCTCCGAAAAA GGGGC CAG GCTCC TTTTTGGCTAAGGAA Daud_1640 1730718 - 1731182 + | hypothetical protein TERM 1934 1731297 - 1731277 - T 80 -10.3 -3.8917 | opp_overlap 1731277 1731276 1731292 GCCGAACGACAACAA GGCCGCCGG CCC CCCGCAGCC CTTTGCATTGTCGGA Daud_1641 1732204 - 1731320 - | UspA domain-containing protein TERM 1935 1732321 - 1732296 - R 100 -15.5 -4.24002 | CGTCAAAGGGCAAAA GGGTTACGGCT CTTA AGCCGCAACCC GATACAATAACGCCC Daud_1642 1733636 - 1732620 - | hydrogenase expression/formation protein HypE TERM 1936 1733376 - 1733362 - G 71 -12.8 -3.05384 | overlap 1733347 1733346 GCCGCCGTCAGGTAA CGGGGC TCG GCCCCG CTCACGGCCAGGTCG Daud_1643 1734824 - 1733703 - | hydrogenase expression/formation protein HypD TERM 1937 1733900 - 1733850 - GR 72 -12.2 -2.57132 | overlap 1733849 CTTCCCCTTCAGAAG GTCCCCGCACCGGCAGCCCTGCGG GAT CCGCGGGGCGGCCACCTCGGGCGC GAAACGGGCCCGGGC TERM 1938 1734379 - 1734362 - GR 76 -12.7 -2.74144 | opp_overlap 1734365, overlap 1734361 GGGCCACGCTCAAAG CCACGGC TGGC GCCGTGG TCTCGAAACCCACCC TERM 1939 1734606 - 1734644 + gr 78 -2.9 -5.06414 | gap 1, overlap 1734612 GTCGCCGTAGTCGGT CACGCACACCGG-GCAGC CCGG GCCGCTCCGGAGTTTGAG TTTTTCTTCCAAAAG TERM 1940 1734671 - 1734659 - GR 74 -7.7 -4.07568 | GTTTTTCTTCCAAAA GGCTT CTC AAGCC CGCCTTCGAGATGGC Daud_1644 1735041 - 1734799 - | hydrogenase assembly chaperone hypC/hupF Daud_1645 1737353 - 1735032 - | (NiFe) hydrogenase maturation protein HypF Daud_1647 1738094 - 1737690 - | hypothetical protein TERM 1941 1738049 - 1738037 - G 73 -6.3 -4.27467 | GTAGAACCCAACAAA CAAAC TTG GTTTG CAAACGAGCTCGCGG Daud_1648 1738874 - 1738203 - | hydrogenase accessory protein HypB Daud_1649 1739223 - 1738813 - | hydrogenase expression/synthesis, HypA Daud_1650 1739834 - 1739349 - | hydrogenase maturation protease TERM 1942 1739852 - 1739864 + r 90 -10.5 -4.2573 | opp_overlap 1739852 TCCCCCTCCGAAAAA GGGGC CAG GCCCC TTTTCACCTTCTTTG TERM 1943 1739864 - 1739852 - R 95 -10.5 -4.56597 | opp_overlap 1739852 TCCCCCTCCGAAAAA GGGGC CAG GCCCC TTTTCACCTTCTTTG TERM 1944 1740069 - 1740097 + r 100 -16.1 -3.55203 | opp_overlap 1740077, overlap 1740071 1740077 AACCCCCTAAGTTCT CTGAAAAAGGGGC CTG GCCCCTTTTTCTG TTTCAGGCACCTTTT TERM 1945 1740071 - 1740095 + r 100 -17.3 -3.34894 | opp_overlap 1740077, overlap 1740069 1740077 CCCCCTAAGTTCTCT GAAAAAGGGGC CTG GCCCCTTTTTC TGTTTCAGGCACCTT TERM 1946 1740077 - 1740089 + r 100 -10.5 -5.19879 | opp_overlap 1740077, overlap 1740071 1740069 AAGTTCTCTGAAAAA GGGGC CTG GCCCC TTTTTCTGTTTCAGG TERM 1947 1740089 - 1740077 - R 95 -10.5 -4.57341 | opp_overlap 1740077 1740071 1740069 AAGTTCTCTGAAAAA GGGGC CTG GCCCC TTTTTCTGTTTCAGG TERM 1948 1740257 - 1740229 - R 100 -23.3 -5.04222 | GAAGGAAAGTAAAAA GCCCTTCCGGAGA GAC TCTCCGGAAGGGC TAGGAAACAGGTACA Daud_1651 1741839 - 1740382 - | nickel-dependent hydrogenase, large subunit Daud_1652 1742792 - 1741839 - | NADH ubiquinone oxidoreductase, 20 kDa subunit TERM 1949 1742808 - 1742818 + r 74 -2.4 -5.08088 | GTCTAACCCTCCCCA CCGG CAG CCGC TTTTTGTTCGGACTT Daud_1653 1743235 - 1742795 - | methyl-viologen-reducing hydrogenase, delta subunit TERM 1950 1743272 - 1743299 + r 74 -4.8 -4.7254 | gap 1, overlap 1743276 GAGTTTCAAGAACGT GCAAGTTCACCGC TCC GCCGCGAACT-GC TTTTTACTCCCACCT Daud_1654 1745081 - 1743516 - | integral membrane protein MviN TERM 1951 1743692 - 1743679 - G 81 -3.7 -5.08824 | CCGGCAGGGAAAAAA GCGGC CAAA GCTGC GTCCACCGTCACCAC TERM 1952 1744245 - 1744224 - G 70 -10.1 -3.57561 | overlap 1744226 GCTCAAGGTCGGAAA GATGGCCGT GGAC ACGGCCAGC ACGAAAAGGCTCTGG TERM 1953 1744504 - 1744450 - G 81 -13.5 -3.59979 | overlap 1744451 GGGTGGTAGCGGAAA CCGGC-GCGGCGCAGCACCGGCACCTG GAT CAGG-GCCATTACGGCGGCGCCGCCGA CCACACCGGCGGCTA TERM 1954 1744503 - 1744451 - G 75 -14.8 -2.75844 | overlap 1744450 GGTGGTAGCGGAAAC CGGC-GCGGCGCAGCACCGGCACCTG GAT CAGG-GCCATTACGGCGGCGCCGCCG ACCACACCGGCGGCT TERM 1955 1745332 - 1745320 - H 95 -10.5 -4.56597 | opp_overlap 1745320 CGGTTTCCGGAAAAA GGGGC CAG GCCCC TTTTCCAGCTCCCGG TERM 1956 1745320 - 1745332 + H 86 -10.5 -4.11216 | opp_overlap 1745320 CGGTTTCCGGAAAAA GGGGC CAG GCCCC TTTTCCAGCTCCCGG TERM 1957 1745701 - 1745690 - g 70 -7.2 -3.98282 | opp_overlap 1745690, overlap 1745686 1745685 TGGAGATCAAGGAAA CCCC TTCC GGGG TTTCGGTGTCCCATA TERM 1958 1746087 - 1746123 + G 80 -5 -4.83615 | gap 1, overlap 1746097 1746103 GGCCCTCACGCCCGC GATGTTCCGCGCGCTCC GACC GGAG-GCCCGGATCGCC TTTTTCTGGCACATC Daud_1655 1745620 - 1747155 + | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) TERM 1959 1747426 - 1747440 + G 73 -7 -4.36914 | GATCATTCAGCACCC CGGAGC ACC GCCCCG TTTTCTGGCCGCCCC Daud_1656 1747172 - 1747957 + | HAD family hydrolase TERM 1960 1747975 - 1747963 - T 100 -10.5 -5.40072 | opp_overlap 1747963 CCCCCCTTAAAAAAA GGGGC CTG GCCCC TTTTTTGCGTTAGGG TERM 1961 1747963 - 1747975 + T 100 -10.5 -5.15969 | opp_overlap 1747963 CCCCCCTTAAAAAAA GGGGC CTG GCCCC TTTTTTGCGTTAGGG Daud_1657 1748953 - 1747985 - | UDP-glucose 4-epimerase Daud_1658 1749201 - 1749040 - | hypothetical protein Daud_1659 1749320 - 1749697 + | histidine triad (HIT) protein Daud_1660 1749969 - 1749694 - | hypothetical protein Daud_1661 1751235 - 1750195 - | hypothetical protein TERM 1962 1750403 - 1750390 - G 72 -3.7 -4.56597 | overlap 1750391 CGCCCGGCGGAAAAA CGCCC CCCA GGCCG GACGCCGAAACTCAA TERM 1963 1750923 - 1750902 - G 77 -4.3 -4.91511 | gap 1, overlap 1750905 1750906 1750907 AGCCGATGAGAAAAA GAAGCGCCGC CCG GCGG-GCCAC CCGGGAGAGCACCCG TERM 1964 1750920 - 1750905 - G 78 -6.8 -4.56153 | gap 1, overlap 1750902 1750906 1750907 CGATGAGAAAAAGAA GCGCCGC CCG GCGG-GC CACCCGGGAGAGCAC Daud_1662 1752089 - 1751367 - | capsular polysaccharide biosynthesis protein TERM 1965 1751707 - 1751682 - G 83 -15.5 -3.17075 | opp_overlap 1751700, overlap 1751685 GCGGCCCGAACCCAA CAATTCCGCCG GGTT CGGCGGAATCG GCCCGCTGGGCAAAA TERM 1966 1751704 - 1751685 - G 84 -13.6 -3.73068 | opp_overlap 1751700, overlap 1751682 GCCCGAACCCAACAA TTCCGCCG GGTT CGGCGGAA TCGGCCCGCTGGGCA Daud_1663 1753470 - 1752133 - | lipopolysaccharide biosynthesis Daud_1664 1755905 - 1753485 - | O-antigen polymerase TERM 1967 1756120 - 1756151 + H 93 -13.8 -3.89346 | ATGAACCGGAACCCG GGCTCCCCTGGA AATAAACC TTCAGGGGAGCC TTTCTAACGTCACCC TERM 1968 1756301 - 1756312 + H 74 -7.2 -4.08945 | opp_overlap 1756287 TCGGCAAGGATTTCC CGCC TTTG GGCG TTTTCGGACCATGGT Daud_1665 1756478 - 1756732 + | hypothetical protein Daud_1666 1756760 - 1757008 + | hypothetical protein TERM 1969 1757026 - 1757011 - f 72 -11.8 -2.74144 | overlap 1757010 GGTCGAGGCCTAAAG CCCCGG GGTA CCGGGG GTACCCGCACTGAAA TERM 1970 1757079 - 1757042 - f 100 -17.1 -3.65351 | opp_overlap 1757042 1757056 1757057 GTACCCGCACTGAAA GGGGACAGTCCCCTT TGGGCCTT AGGGGGACTGTCCCC CCAGGGTACCCGCTT TERM 1971 1757124 - 1757156 + F 70 -9.8 -3.34013 | gap 1 GGGTCGGGTCAGCCC TCTCACC-GGGCGCC CCCG GGCGCCCGGGTCCGA TTCCTTAAGGAGGTG Daud_1667 1757180 - 1757407 + | hypothetical protein Daud_1668 1757477 - 1757668 + | hypothetical protein Daud_1669 1757665 - 1758186 + | N-acetylmuramoyl-L-alanine amidase TERM 1972 1758269 - 1758233 - T 100 -18.1 -3.65351 | opp_overlap 1758233 GTACCCGCACTGAAA GGGGACAGTCCCCTT TGGACTT AGGGGGACTGTCCCC CTAGGGTACCCGGAG TERM 1973 1758233 - 1758245 + T 70 -9.1 -3.66178 | opp_overlap 1758233 GTACCCGCACTGAAA GGGGA CAG TCCCC TTTGGACTTAGGGGG Daud_1670 1758582 - 1758340 - | prevent-host-death family protein Daud_1671 1758997 - 1758725 - | hypothetical protein Daud_1672 1761822 - 1758982 - | superfamily I DNA/RNA helicase TERM 1974 1759052 - 1759023 - G 84 -11.4 -4.18018 | gap 1, overlap 1759024 GCCGGCGATTCAAAA GGCGCGGTGGTGG CGCTC CCACCCCCGC-CC TGCGCCACATAGTCC TERM 1975 1760920 - 1760898 - G 80 -4.7 -4.86731 | overlap 1760900 TGCTGGCAAACAAAA CCGCGCGGC CGGCC ACGGCGCAG CTGGCTAGAATATCA TERM 1976 1761461 - 1761451 - G 71 -8.2 -3.96148 | opp_overlap 1761452, overlap 1761452 CGGCCTCATGACAAA GCCG CCC CGGC GGTCCTCTTCCACCT Daud_1673 1766913 - 1762144 - | DEAD/DEAH box helicase domain-containing protein TERM 1977 1762414 - 1762395 - G 79 -9.2 -4.12188 | GGATGATCGGCAAAA TCTGGGCG CTGT CGCCCGGA AGGACCACGGCGCTG TERM 1978 1762664 - 1762652 - G 73 -6.9 -4.36914 | overlap 1762654 TCCTGCTTCAGAAAA CCCGC GCC GCAGG CCGCACAGATCCAAA TERM 1979 1762695 - 1762682 - G 75 -3.7 -4.72846 | GCACAGATCCAAAAA CCCCG GCCC CGGCG TCCCTCACAGAGCAC TERM 1980 1762828 - 1762848 + g 73 -8.2 -4.00411 | opp_overlap 1762827 1762810, overlap 1762819 CCGGGTGCTGAACAT CCGCACCG GACGG CGCTGCGG TTGTTTGGGCTTTTC TERM 1981 1764906 - 1764895 - G 72 -2.2 -4.72497 | overlap 1764898 1764899 CAGGTACCAAGAAAA GAAG GCCG CCTC TTGCCGTGAGTCGGC TERM 1982 1765287 - 1765264 - G 85 -5.8 -5.0133 | overlap 1765266 CAGGGGCCGAAAAAA CACCGCCCCG TATT CGGGGTGGCT CGGATCCCGCACGGC TERM 1983 1765285 - 1765266 - G 81 -10.6 -4.13561 | overlap 1765264 GGGGCCGAAAAAACA CCGCCCCG TATT CGGGGTGG CTCGGATCCCGCACG TERM 1984 1765416 - 1765392 - G 93 -13.6 -4.11216 | gap 1 GGGCCACCTCGAAAA CGC-CCGCCTC CGGA GAGGCGGCGCG TTCCACCAGGACCCG TERM 1985 1766386 - 1766375 - G 76 -5.8 -4.564 | opp_overlap 1766375, overlap 1766370 1766369 AAGGTGAAACGAAAA GGAG AGCC CTCC TCTTCCAGACGGCGC Daud_1674 1772519 - 1766919 - | hypothetical protein TERM 1986 1769113 - 1769099 - G 71 -8.5 -3.85698 | CCTCCGCTTCATAAA CCGGC CCGCC GCCGG CCACCGCCACACCGG TERM 1987 1770091 - 1770107 + g 76 -5.7 -4.59773 | overlap 1770093 AAGAACTCTTGAGCA CCCGCGT TCA GCGCGAG TTTTTCCCCATCGGG Daud_1675 1773584 - 1772946 - | UvrD/REP helicase family protein Daud_1677 1774405 - 1774190 - | hypothetical protein Daud_1678 1774626 - 1775087 + | DNA polymerase beta subunit TERM 1988 1775139 - 1775121 - g 80 -5.9 -4.67982 | GTTCATCGAAGAAAA CCTGCGT CATCT ACGCCGG TTGGCCCGCCTCCCC Daud_1679 1775071 - 1775502 + | hypothetical protein Daud_1680 1775773 - 1775465 - | hypothetical protein Daud_1681 1776138 - 1775788 - | hypothetical protein Daud_1682 1776395 - 1776165 - | hypothetical protein Daud_1683 1776577 - 1776395 - | hypothetical protein TERM 1989 1776512 - 1776479 - G 83 -12.3 -4.07306 | ATAGGGAATGAGAAA GGCCACCAGGAAGGC GTCG GTCGCCCCGGTGGCC CCGAAGCTGGGCGTC Daud_1684 1778325 - 1776655 - | integral membrane protein MviN TERM 1990 1777678 - 1777647 - G 76 -11.5 -3.72576 | overlap 1777632 1777633 GCGGCCGGTAGGAAA GCCCCAGCCGCCG GAAGGT CGGCAGCTGGATC AAAAACTGAGCGGCG TERM 1991 1777701 - 1777684 - G 78 -4.8 -4.72986 | opp_overlap 1777692, overlap 1777688 CAGCTGGATCAAAAA CTGAGC GGCGAT GCCCAG CAGCGTTGCTACCGC TERM 1992 1778195 - 1778181 - G 86 -8.5 -4.56597 | opp_overlap 1778182, overlap 1778182 CGCTCGCGCCAAAAA CGGCG GCCAG CGCCG CCTCTCTTCCGAAAC TERM 1993 1778197 - 1778182 - G 72 -11.8 -3.33744 | opp_overlap 1778182, overlap 1778181 GCTCGCGCCAAAAAC GGCGGC CAGC GCCGCC TCTCTTCCGAAACCC Daud_1685 1779487 - 1778459 - | dTDP-glucose 4,6-dehydratase TERM 1994 1779296 - 1779283 - G 76 -9.5 -4.07568 | CGCCCCCGGCGAAAA GGCCG GCCA CGGCC TCCCGGTCGGCGATG Daud_1686 1780341 - 1779484 - | dTDP-4-dehydrorhamnose reductase Daud_1687 1781427 - 1780357 - | glucose-1-phosphate thymidyltransferase TERM 1995 1781236 - 1781200 - G 79 -8.5 -4.30719 | overlap 1781202 GTCCTGCACAATAAA GGTCAGCCGCAGGCCGA ACC CCGCCCCGCCGCCGAGC GCATCCTGCACCATG Daud_1688 1782001 - 1781429 - | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1996 1781531 - 1781512 - G 83 -12.8 -3.90744 | CCTTCGGCGAAAGAA GCGGCCGG GCCA CCGGCCAC ACTATGCCCAGGTCG TERM 1997 1781962 - 1781924 - G 72 -2.3 -4.72272 | gap 1 TGTTTCCATGAAAAA GCCCCGCTCGTCGCCGAA GACC TTCGGCT-CGACCAGTAC TAGATCCGGGATGGT Daud_1689 1783150 - 1782002 - | glycosyl transferase, group 1 TERM 1998 1782167 - 1782131 - G 77 -13.2 -3.62597 | gap 2 CTCAGGCCGGAATAA GGCCTC-GCAGCG-AAGA AAC TCTTGCACTGCCGAGGCC AAGCTCTCCTCCGTC TERM 1999 1782216 - 1782197 - G 85 -5.6 -4.96848 | CTGTTCAGAGAAAAA GAGACCGG TCGC CCTGTCCC AGTTCTCACCGTCCG Daud_1690 1783864 - 1783157 - | methyltransferase type 11 Daud_1692 1785291 - 1784164 - | glycosyl transferase, group 1 Daud_1693 1786883 - 1785465 - | hypothetical protein Daud_1694 1787984 - 1786962 - | glycosyl transferase family protein TERM 2000 1788144 - 1788131 - R 76 -5.3 -4.7254 | ACTGCTTAGCAAAAA CATCT TTGA AGATG CCTAAACTTAGGGCG Daud_1695 1788756 - 1788121 - | methyltransferase type 11 Daud_1696 1788993 - 1788790 - | hypothetical protein Daud_1697 1790024 - 1789014 - | glycosyl transferase family protein Daud_1698 1791216 - 1790095 - | DegT/DnrJ/EryC1/StrS aminotransferase Daud_1699 1791630 - 1791220 - | WxcM domain-containing protein Daud_1700 1792367 - 1791627 - | hexapaptide repeat-containing transferase TERM 2001 1792143 - 1792120 - G 72 -2.3 -4.68103 | overlap 1792121 CCAATTTGAACAAAA GGCTCGAAC CTTGGT GTGCGAGCA AGGACTCCGGCTCCC Daud_1701 1793822 - 1792371 - | sulfatase TERM 2002 1793610 - 1793589 - G 83 -8 -4.56597 | gap 1 GTTTTCGTCCAAAAA CGGGTTGCC CCAAT GGCA-CCCG TGCTCCGAAGGGTAT Daud_1702 1794556 - 1793870 - | phosphoadenosine phosphosulfate reductase Daud_1703 1796128 - 1794593 - | undecaprenyl-phosphate galactose phosphotransferase TERM 2003 1796132 - 1796147 + r 81 -11.8 -3.51232 | AGCCGCGGGCATTCC GGCCGC CGCT GCGGCC TTGCTTTCCGGAAGC TERM 2004 1796275 - 1796233 - R 78 -12.1 -3.23216 | opp_overlap 1796233 1796232, overlap 1796236 CCTGATGATGATGAA CAACCCAAAGGTGCTGCCG ACGTG CGAAAGCACATTTGGATTG GTTTGTCTGGAACTT TERM 2005 1796382 - 1796397 + r 74 -6.8 -4.37658 | TCAGTTCGATACCCT GCGGGA AAAC TCCTGC TTTTGTGACCGGCTT TERM 2006 1796476 - 1796435 - R 86 -10.9 -4.1721 | opp_overlap 1796441, overlap 1796441 AGTGATACCCTAAAA TGTAAATCTCCGGCAGGAA AGCC CTCCTGCCGGGGATTTTGA TTCCATTAACGAGAA TERM 2007 1796441 - 1796470 + r 100 -15.8 -4.45664 | opp_overlap 1796435 1796441 ACCCTAAAATGTAAA TCTCCGGCAGGA AAGCCC TCCTGCCGGGGA TTTTGATTCCATTAA TERM 2008 1796470 - 1796441 - R 100 -14.3 -3.93061 | opp_overlap 1796441, overlap 1796435 ACCCTAAAATGTAAA TCTCCGGCAGGAA AGCC CTCCTGCCGGGGA TTTTGATTCCATTAA Daud_1704 1796927 - 1796613 - | hypothetical protein TERM 2009 1796862 - 1796872 + g 83 -6.8 -4.82901 | GACATAGCTCCGCCG GGGA AGA TCCC TTTTTCTGACAAAAA TERM 2010 1796892 - 1796904 + g 71 -4.7 -4.47049 | opp_overlap 1796891 1796892, overlap 1796888 TCTGACAAAAACGAT CCCCC TGG GGCGG TTTATGTTTATGTTT Daud_1705 1797507 - 1796986 - | NusG antitermination factor Daud_1706 1797950 - 1797522 - | hypothetical protein TERM 2011 1797561 - 1797571 + g 76 -8.2 -4.21974 | overlap 1797559 GGTGGGCACCCCGGG CGGC TCC GCCG TTTCTTCGGTGGTCC Daud_1707 1798355 - 1799197 + | hypothetical protein TERM 2012 1799233 - 1799264 + F 89 -13.8 -3.55444 | opp_overlap 1799229 GGGCCGGCAAACCCG GGCTCCCCTGGA AATAAACC TTCAGGGGAGCC TTTCCACAATCACCA Daud_1708 1799672 - 1799950 + | AbrB family transcriptional regulator Daud_1709 1799954 - 1800397 + | PilT domain-containing protein TERM 2013 1800485 - 1800467 - f 70 -3.1 -4.7657 | opp_overlap 1800482 1800484, overlap 1800484 TAAAAATCCCAAAAA GGTATTG CCAAC CAAAACC ACCTGATATAAACTG TERM 2014 1800482 - 1800513 + F 83 -5.9 -4.86033 | opp_overlap 1800467 1800484, overlap 1800484 GGTATTGCCAACCAA AACCACCTGATAT AAACTG ATACCAGGTGGTG TTTTTATGAAGCTTT TERM 2015 1800511 - 1800484 - f 93 -10.7 -4.41494 | opp_overlap 1800482 1800484, overlap 1800467 TATTGCCAACCAAAA CCACCTGATAT AAACTG ATACCAGGTGG TGTTTTTATGAAGCT TERM 2016 1800484 - 1800511 + F 74 -8.5 -4.04397 | opp_overlap 1800467 1800484, overlap 1800482 TATTGCCAACCAAAA CCACCTGATAT AAACTG ATACCAGGTGG TGTTTTTATGAAGCT TERM 2017 1801015 - 1800996 - g 72 -7.8 -4.15044 | CTGGTCGTCAACAAA GCCGAAGA CATG TCCCCGGC GCAGGAGTTAACTGA Daud_1710 1800519 - 1801187 + | resolvase domain-containing protein TERM 2018 1803284 - 1803318 + T 70 -7 -4.14004 | opp_overlap 1803299 ACAGCCGCTTTCATC CCGCCCCCTGAAGG AGGCAGG CCTTCCCGCGGCGG TTTGTAATTATGTTC Daud_1712 1803919 - 1803416 - | hypothetical protein TERM 2019 1803650 - 1803631 - G 74 -5.6 -4.44667 | gap 1, opp_overlap 1803631 1803630, overlap 1803627 CGCTGCAATAATAAA GCGAGCCGC TTT GCCGC-CGC CTTTGGAGATAGCGG Daud_1713 1804172 - 1803924 - | hypothetical protein TERM 2020 1804558 - 1804529 - R 100 -17.1 -5.38321 | overlap 1804530 AAATACGACAAAAAA TCCGGCAGGCGGA GTCA CCCGCCTGCCGGG GAACAATAGCCGGAA TERM 2021 1804557 - 1804530 - R 100 -20.6 -3.80552 | overlap 1804529 AATACGACAAAAAAT CCGGCAGGCGGA GTCA CCCGCCTGCCGG GGAACAATAGCCGGA Daud_1714 1806312 - 1804591 - | S-layer domain-containing protein TERM 2022 1804920 - 1804885 - G 74 -12.4 -3.53012 | opp_overlap 1804912 CGCGTTCGGCTTAAA GCTGCCGTCCGGGTAG CCGC CCACCAGGCCGGCCGC CGCCGCGGTTTCCAC Daud_1715 1808582 - 1806771 - | lytic transglycosylase, catalytic TERM 2023 1808356 - 1808366 + g 78 -6.8 -4.57341 | opp_overlap 1808343, overlap 1808355 AGCCCCGCCTCACTC TCCC GGG GGGA TTTTTCCAGCAGCTT TERM 2024 1809127 - 1809116 - g 75 -4.4 -4.72986 | opp_overlap 1809119 1809120, overlap 1809119 1809120 GAGCTCCACCAAAAA CAAG CGGC CTTG GCCGATTTGCTCTGC Daud_1716 1808762 - 1809388 + | hypothetical protein TERM 2025 1809626 - 1809608 - g 73 -3 -4.72272 | CGTGTTTACGAAAAA GGCGGC GCTCGAT GCGGCC TTCCAGATAACTAGG Daud_1717 1809402 - 1810046 + | hypothetical protein Daud_1718 1810992 - 1810099 - | hypothetical protein TERM 2026 1810714 - 1810702 - G 76 -5.5 -4.54301 | GAAAAAAGGAAGAAA GCCGA TGA TCAGC CCGGCAAAGAACAAA Daud_1719 1811985 - 1811200 - | phosphotransferase domain-containing protein TERM 2027 1811488 - 1811440 - G 95 -16.8 -3.85698 | gap 2, opp_overlap 1811445, overlap 1811475 GTGTTGCCGGACAAA CAGCTCGG-CGGCC-GCTCGCACG TCC CGCCCGAACAGGCCGACCAAGCTG GCCGCCGTAATCTGC TERM 2028 1812017 - 1812050 + H 73 -5.2 -4.66264 | opp_overlap 1812033 TTTTTTCATTATACC GTACCGCGCTCTCA AACGGC TGTGACGGCGGTAC TTTTTGGGCATTTTC Daud_1720 1812108 - 1812698 + | nitroreductase Daud_1721 1812695 - 1813219 + | hypothetical protein Daud_1722 1813430 - 1814545 + | radical SAM domain-containing protein Daud_1723 1815595 - 1814723 - | response regulator receiver protein Daud_1724 1816335 - 1815637 - | hypothetical protein Daud_1725 1818001 - 1816619 - | radical SAM domain-containing protein TERM 2029 1816940 - 1816925 - G 73 -6.8 -4.32607 | overlap 1816926 GGAAAAGTGAACAAA GGCGCA CGGC TGCACC GCGCCGCTGGCGGTA Daud_1726 1819022 - 1818087 - | patatin TERM 2030 1818980 - 1818994 + g 76 -8.5 -4.1673 | CGCCCCCTAGGGCCA GGCCG ATTCG CGGCC TTTCTTCAACCGTTC Daud_1727 1819648 - 1819043 - | phospholipid/glycerol acyltransferase TERM 2031 1819111 - 1819127 + g 70 -7.9 -4.09685 | CTGCCAATGTTTCCT GTTCCGG TCG CCGGACC TTTTCCAGCGTCCAC TERM 2032 1819843 - 1819829 - R 72 -11.4 -3.06133 | opp_overlap 1819822 1819812 1819834 GAAGTGTCCACGGAA CCGGAG CAA CTCCGG CTGCGGGTATCCTGC Daud_1728 1823449 - 1819934 - | putative PAS/PAC sensor protein TERM 2033 1820342 - 1820332 - G 73 -8.2 -4.08692 | CAATGTCGTGCAAAA GCGC CCC GCGC CGGATATGGGCCAGC TERM 2034 1821826 - 1821810 - G 70 -10.1 -3.65542 | opp_overlap 1821809 1821808, overlap 1821808 TTGATTCCCAAAATA TCGGCCA GCA CGGCCGA GCTTTTCCAGGTGCC TERM 2035 1822256 - 1822266 + g 80 -4.6 -4.86731 | overlap 1822248 GAAGAGGCCGCGGTA GCGG TTC TCGC TTTTCTTTAGCGCAC TERM 2036 1823943 - 1823927 - R 72 -3.7 -4.6902 | opp_overlap 1823927, overlap 1823929 TCATAACTGCAAAAA CTCATAA ATT TTATGCG CTTTCGACGCGCATC TERM 2037 1824160 - 1824125 - R 72 -11.8 -2.71483 | opp_overlap 1824124 ACACCGTCGCAACTA CTCCAGGTACACCGGC TCAC GCCGATGCCCTTGGAG ATACTTTTACAAACC Daud_1730 1825472 - 1824141 - | transposase, IS605 OrfB Daud_1731 1825871 - 1825476 - | transposase IS200-family protein TERM 2038 1825925 - 1825893 - R 100 -15.1 -4.39287 | opp_overlap 1825891 CTAAGTATACCAAAA TTTTTGCCGGGAA ACAAGCG TTCCCGGCAAAAA GCTGCTTTCCTCCCG TERM 2039 1825937 - 1825958 + r 100 -18.7 -3.01791 | overlap 1825951 AAAAGCTGCTTTCCT CCCGCCCCC TGAA GGGGGCGGG TCTTCCCGCAGCGAT Daud_1732 1828570 - 1826153 - | tetratricopeptide TPR_4 TERM 2040 1826424 - 1826388 - G 70 -7.7 -4.00042 | TCGCCCAGGAAATAA TGGGCGGCGCCGAGCGG GAA CTGCATGGCGCCGGTCA CCCCCAGTTGAGGTC TERM 2041 1827040 - 1827054 + g 74 -12.8 -3.27476 | GGCGCACCGCCTCCA CCGCCG CCG CGGCGG TTCGTGCTTCCCGCT TERM 2042 1827374 - 1827362 - G 74 -9.1 -3.89822 | CAGGTAGGGCAGAAA GGCCT GAT AGGCC TCCGCCCAGCCGCCG TERM 2043 1827569 - 1827517 - G 100 -13.4 -4.32034 | gap 3, overlap 1827519 TGACCAGGATGAAAA CGGCCGCGCCCGCCAGGCCCAGGGC CAGCCC GCCCAGGGCC-G-CGGCCG-GACCG CGCTGCTCGACCCAC TERM 2044 1828423 - 1828385 - G 91 -6.8 -5.38047 | gap 1, opp_overlap 1828400, overlap 1828393 GACCCAGACAAAAAA GAACAGCACCGCGGCCA GGGCCA CAGCC-CAGTACTGTTC CGCAGCAAAGAAAAG TERM 2045 1828810 - 1828774 - H 100 -20.3 -5.34381 | opp_overlap 1828786 AAAGGGAAAGAAAAA GGGAAAGAAAAAGGGGC CAG GCCCCTTTTTCTCGCCC CGGAGGCACAGGCGG TERM 2046 1828786 - 1828798 + H 100 -10.5 -4.82901 | opp_overlap 1828774 AAAGGGAAAGAAAAA GGGGC CAG GCCCC TTTTTCTCGCCCCGG TERM 2047 1830382 - 1830407 + G 93 -2.5 -5.55698 | gap 1, overlap 1830382 CCTCGCCAACCGGCT GG-TGCTCGCCG CGC TGGTGGGTATCC TTTTTTTGAGTTCTG Daud_1733 1828874 - 1830547 + | hypothetical protein TERM 2048 1831065 - 1831042 - f 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 2049 1831961 - 1831971 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC Daud_1735 1831062 - 1832393 + | transposase, IS4 family protein Daud_1736 1833603 - 1832494 - | CheC, inhibitor of MCP methylation TERM 2050 1832758 - 1832728 - G 93 -13.9 -4.11751 | opp_overlap 1832726, overlap 1832691 AGCAAGCTCCGAAAA GCCGGCGCCCGCA TCCGG TGCGGTCCCCGGC GCTTCCTGGGACCAT TERM 2051 1832776 - 1832807 + g 81 -10 -4.13767 | overlap 1832774 TTCCTGGGACCATGC CGGCGCCGGTGCCG GGTC TGGTGCCGGAGTCG TTTTCGGGTACGGAA Daud_1737 1834594 - 1833596 - | flagellar motor switch protein FliM TERM 2052 1834096 - 1834117 + g 100 -5.2 -5.4756 | gap 1, opp_overlap 1834084, overlap 1834089 1834099 AAATGTCCTGCCAGG CTAGCTGGA AATTC TCCAGC-AG TTTTTTGTTCAGCTT Daud_1738 1834994 - 1834626 - | response regulator receiver protein Daud_1739 1835683 - 1835066 - | CheC, inhibitor of MCP methylation Daud_1740 1836489 - 1835680 - | protein-glutamate O-methyltransferase Daud_1741 1837006 - 1836491 - | CheD, stimulates methylation of MCP proteins Daud_1742 1837846 - 1837106 - | flagellar basal body rod protein TERM 2053 1837674 - 1837684 + g 72 -2.4 -4.72272 | overlap 1837664 GAAGTGGTGCCGATA GGGG TCA CCCG TTTTTCATGCCGCCC Daud_1743 1838280 - 1837843 - | hypothetical protein Daud_1744 1839043 - 1838270 - | FliA/WhiG family RNA polymerase sigma factor TERM 2054 1838432 - 1838443 + g 80 -5.8 -4.72986 | GTAGTACAAGGCCAA GACC AACC GGTC TTTTTCCTCCAGCTG Daud_1745 1839696 - 1839049 - | type IV pilus assembly PilZ Daud_1746 1840589 - 1839717 - | cobyrinic acid a,c-diamide synthase Daud_1747 1841823 - 1840582 - | GTP-binding signal recognition particle TERM 2055 1841616 - 1841653 + g 85 -15.7 -3.40403 | gap 1, overlap 1841616 CCGGCTCCGGCCAAG GGGGATAGTCCCCTTTGG GCC CCAG-GGGGACTGTCTCC TTCTCGTCCAAGGCG Daud_1748 1843891 - 1841813 - | flagellar biosynthesis protein FlhA TERM 2056 1843748 - 1843717 - G 82 -5.8 -4.82901 | gap 1, overlap 1843718 CGTCGGTCACAAAAA GGGTGATCAGGAGGA TGA TCATCCCGAGC-CCC AGGCTGATGACCAGG Daud_1749 1845086 - 1844007 - | flagellar biosynthetic protein FlhB TERM 2057 1844505 - 1844481 - G 77 -14.9 -2.96216 | CGCGATCAGGAGATA GGCGCCGGCCG CCG CGGCCGCCACC GTAAGCAGCACGTTG Daud_1750 1845849 - 1845088 - | flagellar biosynthetic protein FliR TERM 2058 1845327 - 1845294 - G 70 -11.7 -3.13403 | gap 1, overlap 1845292 CGTCGGTCACCAACA GCACCG-CCATCACCG GCG CGGCGATGGTCAGGGC GATCACGAACAGTCC Daud_1751 1846120 - 1845857 - | flagellar biosynthetic protein FliQ TERM 2059 1846404 - 1846381 - H 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 2060 1847300 - 1847310 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC Daud_1752 1846401 - 1847732 + | transposase, IS4 family protein TERM 2061 1847837 - 1847853 + T 70 -5.1 -4.4715 | overlap 1847839 ATATACTCCATTTAC CCCAGTT GCT AACTGTG TTTTGTGGCTTGGGG Daud_1753 1848738 - 1847956 - | flagellar biosynthetic protein FliP Daud_1754 1849127 - 1848735 - | hypothetical protein TERM 2062 1848777 - 1848809 + g 74 -9.7 -3.85114 | overlap 1848797 CGCGTATTTCCCGAG GAGTACGCGCCCCCC GAA GGGGGGACTGTCCTC TTTACTGTCCCCTTT Daud_1755 1849507 - 1849124 - | surface presentation of antigens (SPOA) protein TERM 2063 1849547 - 1849534 - R 73 -5.2 -4.57073 | opp_overlap 1849534 CACCTGCCTGAAAAA GGGG TCGAGT CCCC TTTTTATGGACTACT TERM 2064 1849534 - 1849547 + r 80 -5.2 -4.86001 | opp_overlap 1849534 CACCTGCCTGAAAAA GGGG TCGAGT CCCC TTTTTATGGACTACT Daud_1756 1850043 - 1849558 - | flagellar basal body-associated protein FliL TERM 2065 1849719 - 1849732 + g 74 -2.3 -4.94058 | opp_overlap 1849711 1849707, overlap 1849714 AAACCAACCCGTCCC GGATC CGGT GCTCC TTTTCTTTGAGTTCC TERM 2066 1849952 - 1849914 - G 70 -10 -3.59979 | overlap 1849915 CGCCGGGATTGGAAA GGGTGAAGGCGGCCGCCG CTC CGGCGGCCGCCAACAAAA CCAGCACCACCAGCA TERM 2067 1849951 - 1849915 - G 72 -13.5 -2.75844 | overlap 1849914 GCCGGGATTGGAAAG GGTGAAGGCGGCCGCCG CTC CGGCGGCCGCCAACAAA ACCAGCACCACCAGC Daud_1757 1851012 - 1850080 - | hypothetical protein TERM 2068 1850428 - 1850412 - G 76 -6.5 -4.4078 | GGCCGTTAACGAAAA TGAGCCC GTT GGGGTCA ATGCGCAGGGTGGTC Daud_1758 1851464 - 1851093 - | flagellar operon protein Daud_1759 1851871 - 1851467 - | flagellar hook capping protein Daud_1760 1853442 - 1851889 - | flagellar hook-length control protein TERM 2069 1852399 - 1852353 - G 79 -13.6 -3.53012 | TCCCCGGCGGGGAAA CGTCCGGCACACTCCAGCCC GTTCCCT GGGCTGGGACCTGCCGGTCG ACAGGCGCGTGCACA TERM 2070 1852478 - 1852513 + g 70 -10.4 -3.56092 | gap 1, opp_overlap 1852499 GGTCCCGACCGGTCG GTCGCCGCCT-CGGC ACGGAAA GCCGCGGGCCGCGAC TTTAAGCCGTCATCC TERM 2071 1853025 - 1852997 - G 81 -15.2 -3.01712 | opp_overlap 1852997 CCCCCGCCGGGAACA CCGGGCACGGCC CCGAC GGCCGCTCCCGG TCTTGAAGCTTGTAC TERM 2072 1852997 - 1853025 + g 71 -13 -3.07233 | opp_overlap 1852997 CCCCCGCCGGGAACA CCGGGCACGGCC CCGAC GGCCGCTCCCGG TCTTGAAGCTTGTAC TERM 2073 1853331 - 1853384 + g 91 -20.9 -2.52464 | gap 1, opp_overlap 1853320 1853333 ACAAGCACGCCACGA AATCCGCGGCCGGCAGGGTGCCGCCG CCC CGGCGGCACCC-GCTGGGCCCGGACC TGCCTTGCGGAACCG TERM 2074 1853382 - 1853333 - G 100 -25.7 -3.75437 | gap 1, opp_overlap 1853331, overlap 1853320 AAGCACGCCACGAAA TCCGCGGCCGGCAGGGTGCCGCCG CCC CGGCGGCACCC-GCTGGGCCCGGA CCTGCCTTGCGGAAC Daud_1761 1853907 - 1853443 - | flagellar export protein FliJ TERM 2075 1853578 - 1853616 + g 70 -10.2 -3.64259 | gap 1, opp_overlap 1853578 1853577 GAGCCGCTCCAGAAC CGCCCGTGCCCGCCTGG CCTCCA CCACGCGGGCGCGC-CG TTCTTCCACCTCCTT Daud_1762 1855255 - 1853891 - | flagellar protein export ATPase FliI TERM 2076 1854337 - 1854305 - G 86 -12.8 -4.10161 | gap 2, overlap 1854318 GAGCACGGTGTAAAA GCCGGTGATCGAACCC GCC GGGCTCG-TC-CCGGC GCGCTCCAGAAGCTT TERM 2077 1854812 - 1854768 - G 74 -5.7 -4.4009 | gap 3, opp_overlap 1854811, overlap 1854769 CCGCAGGTCAGAAAA CCGTCGATCGCCCGCACCCCCG TCTC CAGCGG-GCGGTCGAT-G-CGG CGCCGGCTGAGCGGG TERM 2078 1854812 - 1854838 + g 71 -13.7 -2.57344 | opp_overlap 1854769, overlap 1854811 CGGGCGGTCGATGCG GCGCCGGCTGA GCGGG TCAGGCGGCGC GTTGTGCACCGGGTA TERM 2079 1855326 - 1855307 - R 70 -9.3 -3.69734 | AATAACTTACGCAAA CCTGGAG TTTCAT CTCCAGG CGGCGCCGCGCGCGG Daud_1763 1856066 - 1855371 - | flagellar biosynthesis/type III secretory pathway protein-like protein Daud_1764 1857048 - 1856038 - | flagellar motor switch protein FliG Daud_1765 1858618 - 1857062 - | flagellar M-ring protein FliF TERM 2080 1857198 - 1857161 - G 88 -8.3 -4.72272 | gap 1, opp_overlap 1857172, overlap 1857164 GTCGCTCAGGAAAAA CACCG-GGTCCGCGGCCG CCG CAGCCACCGACAGCGGCG AGAGTTCCTCCACCT TERM 2081 1858119 - 1858140 + g 93 -7.3 -5.0133 | overlap 1858097 1858097 GACGCGGTCGGGGGA GCCTTTTCG GTGG CGAAAATGC TTTTTTCGGGCAGTA TERM 2082 1858663 - 1858651 - R 74 -10.5 -3.54424 | TTCCACCGCGGGAAA GCGCG GCT CGCGC ACTCTACCGGGTAAT Daud_1766 1859083 - 1858775 - | flagellar hook-basal body complex subunit FliE Daud_1767 1859521 - 1859102 - | flagellar basal-body rod protein FlgC TERM 2083 1859396 - 1859380 - G 70 -7.9 -4.08767 | GGTACTGGGCGAAAA CCGGCAC TTC ACGCCGG TAGGGACCGCCTTCC Daud_1768 1859926 - 1859528 - | flagellar basal-body rod protein FlgB TERM 2084 1860078 - 1860063 - H 100 -11.8 -4.91712 | CGGAACCGATAAAAA CCGCCC CATA GGGCGG CTCCGCGAAAGTAAT TERM 2085 1860485 - 1860471 - H 80 -4.2 -5.12474 | TACAATACAGAAAAA CCCG GCTTGAA CGGG ATGAAGCACGATGAG TERM 2086 1860844 - 1860855 + G 85 -5.8 -5.00616 | ACCTGCTTTGAGTTC GAGG ACTA CCTC TTTTTTAAGCGGGAA Daud_1769 1860496 - 1861374 + | hypothetical protein Daud_1770 1861443 - 1862606 + | DegT/DnrJ/EryC1/StrS aminotransferase Daud_1771 1863355 - 1862624 - | acylneuraminate cytidylyltransferase TERM 2087 1863389 - 1863427 + r 84 -12.5 -3.36785 | gap 2, opp_overlap 1863365, overlap 1863389 CGATATGCCGCTTAA GGGGTCGAGTCCCCTTTGG GCC CCAG-GGGGACT-GTCCCC TTCCTTAAAATATCA Daud_1772 1864492 - 1863440 - | N-acetylneuraminate synthase TERM 2088 1864159 - 1864131 - G 78 -11.7 -3.72695 | opp_overlap 1864155, overlap 1864152 ATCTCTTCCAGGAAA TCCACGGCCGTTG GGT CAAAGGCCGTTGA AAACAACTCTATACC TERM 2089 1864540 - 1864530 - R 76 -5.4 -4.82667 | GTATGAGATTAAAAA GTTG AAG CAAC TCCGCAAGTTCAGTG Daud_1773 1865190 - 1864507 - | HAD family hydrolase Daud_1774 1866112 - 1865174 - | hypothetical protein TERM 2090 1865330 - 1865313 - G 79 -8.3 -4.26202 | AGACGGACCAACAAA CGGGGCG TAAA CGCACCG GCAGCGAAACCTAGG Daud_1775 1867045 - 1866149 - | methyltransferase type 12 TERM 2091 1866273 - 1866255 - G 73 -6.6 -4.3487 | ATAGACAACTCAAAA GCCACGCG CTT CTCGTGAC ATTGGCTACCGACCT Daud_1776 1867974 - 1867042 - | NAD-dependent epimerase/dehydratase TERM 2092 1867650 - 1867638 - G 73 -3.3 -4.67641 | AGGCGAAAACGAAAA CCTTC AGA GATGG CATAAGAGAGAGTGC Daud_1777 1869032 - 1867971 - | spore coat polysaccharide biosynthesis protein glycosyltransferase-like protein TERM 2093 1868552 - 1868538 - G 78 -6.4 -4.62069 | CTGCCACTTCAAAAA CTCTCG GCG CAAGAG CACGTACCTGGTTCC TERM 2094 1869172 - 1869192 + r 73 -5.4 -4.58283 | opp_overlap 1869166, overlap 1869166 1869174 CTGGGAGAACTGATT GATCAGCT TCTGC AGCTGACC TTTTTCAAGCCATTG Daud_1778 1870200 - 1869148 - | polysaccharide biosynthesis protein CapD TERM 2095 1869529 - 1869513 - G 88 -7.9 -4.92812 | overlap 1869501 1869515 TGAGAACAAAAGAAA CCCCCTG TTC CAGGGTG ATCCAAAAACGGCTC TERM 2096 1869559 - 1869577 + g 78 -3.1 -4.98255 | CATCCGCTCGTCAGT GACGG TCAAAGTCC CCGTC TTTTTCTGCTTGAGG TERM 2097 1869916 - 1869928 + g 71 -9.1 -3.78934 | opp_overlap 1869914 AACGCCGTAGAACGC CCGGT ACA ACCGG TTCTTGTCGCGCACA TERM 2098 1870377 - 1870345 - H 72 -11.3 -3.01712 | gap 1, opp_overlap 1870376 GTTGGCGGCCGAACA GGGACTGTCCCCCT GCGGGA AGGGGG-CTGTCCC CCTAAAAGGAGTTGG Daud_1779 1870399 - 1870947 + | hypothetical protein TERM 2099 1871356 - 1871367 + G 83 -7.2 -4.67353 | CTTTTGACTTCTCTG CCGG CAGT CCGG TTTTTGACTGGCTGC TERM 2100 1872522 - 1872470 - g 76 -7.7 -4.25104 | gap 4, overlap 1872471 CCTGCGCGACCAAAA CCGGCCG--CCCGACCCGCT--CGGGG CAC CCGCGTTAGCGGGTCGGGTACCCCCGG GTACCCCGGGCGGGT Daud_1780 1870944 - 1872824 + | hypothetical protein Daud_1781 1872984 - 1874246 + | flagellin domain-containing protein TERM 2101 1874333 - 1874294 - f 72 -2.1 -4.8622 | gap 2, overlap 1874295 1874296 CGGGGGAATGAAAAA GTGGTCGAGGGAGCCATCC GCGA GGATGGCTC-C-CGGTCAT GACATAAACGCTGTC TERM 2102 1874614 - 1874572 - g 72 -12.1 -3.27786 | gap 2, overlap 1874564 1874573 GCCAAAAGGGACGAA CCGCGCGCCGTGCAGTCCCTG GAA CAGGAACTG-ACCGC-CGCGA TCGAGCTGGTGAACC TERM 2103 1874613 - 1874573 - g 71 -13.4 -2.5619 | gap 2, overlap 1874572 1874564 CCAAAAGGGACGAAC CGCGCGCCGTGCAGTCCCTG GAA CAGGAACTG-ACCGC-CGCG ATCGAGCTGGTGAAC Daud_1782 1874443 - 1874814 + | flagellar protein FlaG protein TERM 2104 1875239 - 1875205 - g 75 -12.1 -3.57144 | gap 2, opp_overlap 1875225, overlap 1875206 GGTGGCATCGTCAAA CCCCGCGGCGGTGACCG CCA CGGCCTC-GCCG-GGGG CCGCAAAAGCCGATT Daud_1783 1874966 - 1876786 + | flagellar hook-associated 2 domain-containing protein TERM 2105 1877157 - 1877144 - g 73 -8.1 -4.0098 | CGGGAACTGAAAGAA GCCTG GAGC CAGGC CTTGAAGCCGAGAAG Daud_1784 1876805 - 1877209 + | flagellar protein FliS Daud_1785 1877199 - 1877684 + | hypothetical protein TERM 2106 1877729 - 1877755 + T 86 -12.4 -3.86311 | opp_overlap 1877736, overlap 1877730 1877736 AAGGATTAGCTAAGC TGAAAAAGGGGT CAG ACCCCTTTTTCC TTTAGGTTTCGGTGT TERM 2107 1877730 - 1877754 + T 87 -15.9 -2.91063 | opp_overlap 1877736, overlap 1877729 1877736 AGGATTAGCTAAGCT GAAAAAGGGGT CAG ACCCCTTTTTC CTTTAGGTTTCGGTG TERM 2108 1877736 - 1877748 + T 100 -9.1 -5.01042 | opp_overlap 1877736, overlap 1877730 1877729 AGCTAAGCTGAAAAA GGGGT CAG ACCCC TTTTTCCTTTAGGTT TERM 2109 1877748 - 1877736 - T 89 -9.1 -4.67234 | opp_overlap 1877736 1877730 1877729 AGCTAAGCTGAAAAA GGGGT CAG ACCCC TTTTTCCTTTAGGTT Daud_1786 1878107 - 1877757 - | hypothetical protein Daud_1787 1879101 - 1878169 - | flagellar hook-associated protein 3 Daud_1788 1880720 - 1879122 - | flagellar hook-associated protein FlgK TERM 2110 1879691 - 1879729 + g 77 -13.1 -3.55761 | gap 2, overlap 1879692 1879697 CAATCAACCAGCCGT TCGCCAGTCGGTGGGCGTC AGT GCCGCCC-CCGGC-GGCGG TTTCGCCGGTCACTC TERM 2111 1879692 - 1879728 + g 75 -14.4 -2.73243 | gap 2, overlap 1879691 1879697 AATCAACCAGCCGTT CGCCAGTCGGTGGGCGTC AGT GCCGCCC-CCGGC-GGCG GTTTCGCCGGTCACT Daud_1789 1881246 - 1880761 - | FlgN family protein TERM 2112 1880882 - 1880862 - G 73 -6.7 -4.26189 | overlap 1880863 CGACAAATTGTAAAA TGGCCCGGT TGA AGCGGGCCG CGTTCAGCATCAGCA Daud_1790 1881539 - 1881243 - | anti-sigma-28 factor, FlgM TERM 2113 1881452 - 1881470 + g 75 -12.4 -3.60805 | overlap 1881436 1881453 CCTCGGCACCCTCCG TCCGGGGA TGT TCCCCGGG TTTGCGATCCACTAT TERM 2114 1881453 - 1881469 + g 72 -13.7 -2.76162 | overlap 1881436 1881452 CTCGGCACCCTCCGT CCGGGGA TGT TCCCCGG GTTTGCGATCCACTA Daud_1791 1882712 - 1881660 - | response regulator receiver modulated CheB methylesterase Daud_1792 1884804 - 1882699 - | CheA signal transduction histidine kinase TERM 2115 1883893 - 1883916 + g 79 -8.2 -4.31835 | gap 1, overlap 1883895 1883898 GTCCAGCTTCTGGAC GTCGATCCGGA CGG TCCGGAT-GGC TTTCTTGTGGGCGTT Daud_1793 1885319 - 1884816 - | putative CheW protein Daud_1794 1885676 - 1886494 + | MotA/TolQ/ExbB proton channel Daud_1795 1886478 - 1887251 + | OmpA/MotB domain-containing protein Daud_1796 1888278 - 1887334 - | hypothetical protein Daud_1797 1888637 - 1888323 - | hypothetical protein Daud_1798 1889677 - 1888658 - | putative CRISPR-associated RAMP family protein Daud_1799 1890326 - 1889682 - | hypothetical protein Daud_1800 1891222 - 1890323 - | hypothetical protein Daud_1801 1892063 - 1891215 - | CRISPR-associated Csm3 family protein TERM 2116 1891711 - 1891664 - G 72 -7.4 -4.18197 | overlap 1891665 ATGGGCTACCGAAAA TCCGGCACACCCGGCAGGACCG CTCC CAGACCTGCTGGGCCAGCCAGT CGTCGCGGCCCTCGT Daud_1802 1892485 - 1892060 - | hypothetical protein Daud_1803 1893753 - 1892482 - | CRISPR-associated RAMP Csx10 family protein TERM 2117 1893155 - 1893126 - GR 80 -9.9 -4.06502 | gap 1, opp_overlap 1893150 1893151, overlap 1893127 TACCCGTAAAGTAAA GCGCCC-GGTCCCG CCC CGGCACCTGGGCGT CCAGGGCGTAAAGCA TERM 2118 1893154 - 1893127 - GR 84 -13.4 -3.03419 | gap 1, opp_overlap 1893150 1893151, overlap 1893126 ACCCGTAAAGTAAAG CGCCC-GGTCCCG CCC CGGCACCTGGGCG TCCAGGGCGTAAAGC Daud_1804 1894447 - 1893725 - | hypothetical protein Daud_1805 1896740 - 1894461 - | hypothetical protein TERM 2119 1895513 - 1895524 + g 71 -5.8 -4.36914 | overlap 1895499 1895501 1895500 CCCGGAGCTGCTCCT CCAG TTCC CTGG TTTTATCCCGCCGGG Daud_1806 1898008 - 1896737 - | hypothetical protein TERM 2120 1897078 - 1897092 + g 73 -8.5 -4.06182 | overlap 1897079 ACGCTTCTCCCGGCC CCGCC GCAAG GGCGG TATTTTTCTCGGTCA TERM 2121 1897079 - 1897094 + g 74 -2.4 -4.87665 | overlap 1897078 CGCTTCTCCCGGCCC CGCCGC AAGG GCGGTA TTTTTCTCGGTCAGG TERM 2122 1897263 - 1897246 - G 77 -2.6 -5.00616 | opp_overlap 1897234, overlap 1897247 CCTCCTGGCAAAAAA GCCTGG CTTCTT CCAGGA CCGCCCAAAGTTCGC TERM 2123 1898350 - 1898330 - R 74 -10.3 -3.55761 | opp_overlap 1898348 TAGGTAGGCTGGAAA CCGGCCAGC GCC GCGGGCCAG AACCACTTCTGTTTC TERM 2124 1899981 - 1899954 - R 74 -11.4 -3.17229 | opp_overlap 1899962, overlap 1899952 1899964 AGGGCATCACGAATA GGATTCAAACCC TCCG GGGTTTCAATCC CTCGTAGGTAGGCTG TERM 2125 1900233 - 1900201 - R 71 -10 -3.55761 | overlap 1900202 TAGGTAGGCTGGAAA CTTTGTGGCCAG CCCCTCATC CTGGCCACAAAA GGAAGTTTCAATCCC TERM 2126 1900666 - 1900684 + r 70 -6.7 -4.20136 | opp_overlap 1900666 AGGTAGGCTGGAAAC TGTTCCG GGACG CGGAGCA TTTCATTTTCACCAT Daud_1807 1902363 - 1900969 - | putative methyl-accepting chemotaxis sensory transducer TERM 2127 1901935 - 1901947 + g 75 -4.1 -4.71426 | TCGCACTTTGTTGCG GCTTT TTA AGAGC TTTTCTTCCTGCGCC TERM 2128 1903037 - 1903055 + H 70 -8.9 -3.67296 | overlap 1903026 TTCGGCACTCCGGGC CAGTGCT TGTCT AGCACTG TTTCAATCCCTCGTA TERM 2129 1903715 - 1903701 - H 70 -5.6 -4.41616 | opp_overlap 1903702, overlap 1903702 ATTGTGCTAAATAAA CGGCGT GGT ACGCCT GTGGTTTCAATCCCT TERM 2130 1905002 - 1904990 - g 75 -4.1 -4.71426 | GGCGCAGGAAGAAAA GCTCT TAA AAAGC CGCAACAAAGTGCGA Daud_1808 1904574 - 1905968 + | putative methyl-accepting chemotaxis sensory transducer TERM 2131 1906729 - 1906717 - f 76 -3.3 -4.98531 | overlap 1906727 GCTGGAAACCAAAAA CCAGC GAA ACCGG CAAAAACTCTGTCGA TERM 2132 1909297 - 1909308 + F 71 -4.4 -4.59773 | opp_overlap 1909296 1909297, overlap 1909296 AGGTAGGCTGGAAAC TGCA ATGC TGCA TTTTTGCGGGTGGAA TERM 2133 1910825 - 1910853 + F 76 -10.9 -3.67296 | opp_overlap 1910819 1910842 TGGAAACCACCCCAA CCCCTCCGGGAGT AAA ACCTACGGAGGGG TTTCAATCCCTCGTA TERM 2134 1910870 - 1910842 - f 81 -8.2 -4.25104 | gap 1, opp_overlap 1910825, overlap 1910819 CCTCCGGGAGTAAAA CCTACGGAGGGGT TTCA ATCCCT-CGTAGG TAGGCTGGAAACGTC TERM 2135 1911028 - 1911056 + F 76 -10.9 -3.67296 | opp_overlap 1911022 1911045 TGGAAACCACCCCAA CCCCTCCGGGAGT AAA ACCTACGGAGGGG TTTCAATCCCTCGTA TERM 2136 1911073 - 1911045 - f 81 -8.2 -4.25104 | gap 1, opp_overlap 1911028, overlap 1911022 CCTCCGGGAGTAAAA CCTACGGAGGGGT TTCA ATCCCT-CGTAGG TAGGCTGGAAACGTC TERM 2137 1912714 - 1912702 - g 75 -4.1 -4.71426 | GGCGCAGGAAGAAAA GCTCT TAA AAAGC CGCAACAAAGTGCGA Daud_1809 1912286 - 1913680 + | putative methyl-accepting chemotaxis sensory transducer Daud_1810 1914300 - 1914037 - | CRISPR-associated Cas2 family protein Daud_1811 1915298 - 1914303 - | CRISPR-associated Cas1 family protein TERM 2138 1914338 - 1914350 + g 72 -2.6 -4.76312 | GTTTGTAGGGCTGCT CGCC CATCA GGTG TTTTTGAATCTTGTA Daud_1812 1915859 - 1915323 - | CRISPR-associated Cas4 family protein TERM 2139 1915567 - 1915586 + g 85 -5.6 -5.0538 | overlap 1915568 AACTGCATCCTGGCG GCTTCCCG GGCC CGGGAGGA TTTTTTCACCTCCGC Daud_1813 1918103 - 1915914 - | metal dependent phosphohydrolase TERM 2140 1916568 - 1916549 - GR 74 -7.9 -4.08216 | CCACCTCGGTGAAAA GGACATC ATAGGA GATGTCC AAGCTAACCTCCACA TERM 2141 1917914 - 1917870 - GR 100 -13.6 -4.05788 | opp_overlap 1917877 GGCGGCTAAAGCAAA GGGAAGGGAGGCAAGGGC GTGGGGATA GCCCTTGCCCCTTTTCCC GCGCATATAATCCTG TERM 2142 1917877 - 1917907 + gr 83 -9.7 -4.08394 | opp_overlap 1917870 AAAGCAAAGGGAAGG GAGGCAAGGGC GTGGGGATA GCCCTTGCCCC TTTTCCCGCGCATAT Daud_1814 1918774 - 1918058 - | CRISPR-associated Cas5 family protein TERM 2143 1918207 - 1918224 + gr 74 -5.5 -4.42788 | overlap 1918207 AGGGCCTGGGGTTCA GGGGG TAGCGAAT CCCCC TTTTATCAACTTCAA Daud_1815 1919778 - 1918804 - | CRISPR-associated autoregulator DevR family protein protein TERM 2144 1919125 - 1919077 - G 83 -5.1 -5.04601 | gap 1 GGCATAAACGAAAAA CCGGGGCGAAAGATCGCTCAGC ATCCGG GCCGTGCG-CCCCCCTCCCCAG AGGAGGCCCAAGGCG Daud_1816 1921300 - 1919756 - | hypothetical protein TERM 2145 1920718 - 1920694 - G 74 -4.9 -4.57341 | AATCGCTGTGAAAAA GGAAGAAGTGC AGA GCCGTCCTTCC CTGGGCTACCCAAAG Daud_1817 1922255 - 1921461 - | CRISPR-associated Cas family protein Daud_1818 1923274 - 1922303 - | CRISPR-associated RAMP Cmr6 family protein TERM 2146 1922810 - 1922797 - G 79 -8.1 -4.3739 | CATCGGGGTATAAAA GCCTG GAAC CAGGC AGGGGCAGCGCATCG TERM 2147 1923224 - 1923234 + g 74 -4.6 -4.57569 | overlap 1923216 1923215 CCAAAGCCCGGCGTT CGTC GTC GGCG TTTTTCGCGCGCTGA Daud_1819 1923648 - 1923271 - | CRISPR-associated Cmr5 family protein Daud_1820 1924517 - 1923651 - | CRISPR-associated RAMP Cmr4 family protein family protein TERM 2148 1924557 - 1924547 - R 76 -3.2 -5.00884 | AGTTTCTTTAAAAAA GCCT GTA AGAC ATCTGGGATCCCATT Daud_1821 1925886 - 1924528 - | CRISPR-associated RAMP Cmr1 family protein Daud_1822 1927070 - 1925895 - | hypothetical protein TERM 2149 1926479 - 1926467 - G 74 -4.7 -4.56597 | opp_overlap 1926467 CCCGGGTTTGAAAAA GGGCG CCC CGCTC TTCATCTGCTGTTTG TERM 2150 1927055 - 1927069 + g 84 -2.1 -5.26316 | GATCGCGGGGTTCAA TGATC CAGAC GGTCA TTTTTTATCACCTCG Daud_1823 1928874 - 1927051 - | CRISPR-associated RAMP Crm2 family protein TERM 2151 1927666 - 1927652 - G 70 -7.8 -4.07568 | overlap 1927661 TCTTCTGCTTTAAAA CCAGCA AAC CGCTGG CGGAACGTCTCAGCC TERM 2152 1928824 - 1928796 - G 70 -7.3 -4.08887 | overlap 1928798 ACGAGCCAAACCAAA GATCGCGACTGCG CCG CGCGGTAGCGATG AAATCCTGAACCGGT TERM 2153 1928822 - 1928798 - G 70 -9.9 -3.63425 | overlap 1928796 GAGCCAAACCAAAGA TCGCGACTGCG CCG CGCGGTAGCGA TGAAATCCTGAACCG Daud_1824 1929844 - 1928930 - | putative transcriptional regulator Daud_1825 1930403 - 1930023 - | hypothetical protein Daud_1827 1931439 - 1930594 - | response regulator receiver protein TERM 2154 1931250 - 1931219 - G 79 -13.6 -3.53012 | overlap 1931220 TCCTCGCCCCGGAAA TCGGCGACCGGGCC GCCG GGCACGGTCACCGG AACCGCCCGCAGCGT TERM 2155 1931249 - 1931220 - G 84 -17.1 -2.71712 | overlap 1931219 CCTCGCCCCGGAAAT CGGCGACCGGGCC GCCG GGCACGGTCACCG GAACCGCCCGCAGCG Daud_1829 1932741 - 1932412 - | DNA binding domain-containing protein TERM 2156 1932772 - 1932791 + r 74 -4.8 -4.69464 | ACCAAATTTTCAGCA CGCCGCCC TCCA GCACGGCG TTTTTGACCTCTTTT TERM 2157 1933034 - 1932980 - R 80 -9.3 -4.09243 | gap 3, overlap 1932982 CAGACCCCGGTAAAA CAGCCGTGCGGGATCT--TCCGCGCC GAAGCA GGCGCGGGCTAGCTCCCGCAAGGC-G TCCGGTCCCACCATC TERM 2158 1933033 - 1932982 - R 86 -13 -3.6422 | gap 2, overlap 1932980 GACCCCGGTAAAACA GCCGTGCGGGATCT--TCCGCGCC GAAGCA GGCGCGGGCTAGCTCCCGCAAGGC GTCCGGTCCCACCAT Daud_1831 1933653 - 1933297 - | transcriptional modulator of MazE/toxin, MazF Daud_1832 1933933 - 1933643 - | CopG family transcriptional regulator Daud_1833 1934074 - 1934550 + | hypothetical protein Daud_1834 1934547 - 1935149 + | hypothetical protein TERM 2159 1935270 - 1935290 + F 100 -9.7 -5.26119 | opp_overlap 1935268 CAATGAAGCAAAGGC CTCCGGG AATCTAA CCCGGAG TTTTGTTTTTGAGCC TERM 2160 1935484 - 1935454 - f 100 -17.6 -3.11812 | gap 1 AGTGACAGTACTTAA GGCCG-GGCCCGG AGTGGG CCGGGCCGCGGCC TAGAACCGCACACTC TERM 2161 1935911 - 1935929 + G 76 -9.5 -4.07568 | overlap 1935917 CTGAACGGGGGGATC GTCGGCC TGGAC GGCCGGC TTTTCCGGGCGGCCG Daud_1835 1935794 - 1936735 + | hypothetical protein Daud_1836 1936758 - 1937111 + | flagellar protein FhlB-like cytoplasmic domain-containing protein Daud_1837 1937090 - 1937551 + | ribonuclease H Daud_1838 1937881 - 1937636 - | hypothetical protein TERM 2162 1937965 - 1937943 - R 95 -9.8 -4.7254 | opp_overlap 1937943 1937950 ACCGGGTAGGAAAAA GCCCACCC TGACAGC GGGCGGGC TTTGCCGTTCTCGGG Daud_1839 1939106 - 1937994 - | hypothetical protein Daud_1840 1939744 - 1939229 - | inorganic diphosphatase Daud_1841 1939831 - 1940223 + | hypothetical protein TERM 2163 1940247 - 1940235 - f 95 -10.5 -4.59853 | opp_overlap 1940235, overlap 1940224 1940225 1940237 CTAACCCCCCAAAAA GGGGC CAG GCCCC TTTTTACCTTCTTTG TERM 2164 1940235 - 1940247 + F 100 -10.5 -4.8384 | opp_overlap 1940224 1940225 1940235 1940237 CTAACCCCCCAAAAA GGGGC CAG GCCCC TTTTTACCTTCTTTG TERM 2165 1940616 - 1940643 + G 100 -6.2 -5.50313 | gap 1, opp_overlap 1940608, overlap 1940618 GGACATACCCCTACC CACCGCCGGTGAC GGT GTCAC-GGAGGGG TTTTTTACTTTTCTA Daud_1842 1940485 - 1941003 + | hypothetical protein Daud_1843 1941260 - 1941805 + | CBS domain-containing protein TERM 2166 1941941 - 1941957 + F 100 -8.7 -6.09888 | ACTAAAGAGATTATT CCGTACT GGT GGTACGG TTTTTTTTGTTGGAG Daud_1844 1941949 - 1942590 + | metal dependent phosphohydrolase TERM 2167 1942783 - 1942796 + T 71 -4.5 -4.67353 | ACTTTCAGGGGCTTC CTTGG CCTT CCAGG TTTTTGACTGAATCG Daud_1845 1943446 - 1942772 - | hypothetical protein Daud_1846 1944443 - 1943499 - | response regulator receiver modulated diguanylate cyclase TERM 2168 1944562 - 1944576 + r 78 -7 -4.66163 | overlap 1944564 1944573 TAAACCCTGGGACCC GACCGG CAT CCGGCC TTTTTGCCTGAAGGT Daud_1847 1945557 - 1944598 - | cobalamin biosynthesis protein CobD TERM 2169 1944641 - 1944624 - G 84 -14.1 -3.70546 | TGAGGAAAACCAGAA CGGCCGC GCCC GCGGCCG CAAACAGCCAGGCGG Daud_1848 1947028 - 1945538 - | cobyric acid synthase CobQ TERM 2170 1945913 - 1945931 + g 72 -11.7 -3.28712 | CTCAGCCGTAACGCC GCGCACC TGAAC GGTGCGC TTCTCGGACGCAAAG TERM 2171 1946273 - 1946291 + g 74 -11.6 -3.53012 | CACCGCCACCGCCAG GTCGCCCG GGG CGGGCGCC TTTCCCCGCCCGGAG TERM 2172 1946676 - 1946696 + g 86 -8.1 -4.54727 | opp_overlap 1946644 1946641 AGCCGGTCGAGGGCG GCGGCGGCC AGC GGCCACAGC TTTTCCTTTAAGGCG TERM 2173 1946823 - 1946862 + g 75 -12 -3.65902 | gap 1, overlap 1946824 TCCACGTGGGGCGGA ACGCCCGCGGCCTCGGCCT GCA AGGCCTGGGC-GCGGCCGA TTTCCCTGCCGTCCG TERM 2174 1946824 - 1946861 + g 78 -15.5 -2.79327 | gap 1, overlap 1946823 CCACGTGGGGCGGAA CGCCCGCGGCCTCGGCCT GCA AGGCCTGGGC-GCGGCCG ATTTCCCTGCCGTCC Daud_1849 1948065 - 1947025 - | histidinol-phosphate transaminase TERM 2175 1947721 - 1947772 + g 71 -12.6 -3.04144 | overlap 1947767 ACGTCCATCCACGAC CCGCGAGGGCGCCGCCGCCACCGG AAGG CCGCAGGCCTCGGCGGCGCCGCGG TATTCCGAATAGCAC Daud_1850 1949507 - 1948143 - | cobyrinic acid a,c-diamide synthase TERM 2176 1948428 - 1948403 - G 76 -9.7 -4.09108 | gap 1 CGTAACCCAGAGAAA GC-CGCCGGC CGGCCAT GCCGGCGCGC ACCGGGAGCAGACCG TERM 2177 1948807 - 1948790 - G 72 -4 -4.56597 | overlap 1948791 CGTCTCCTGCAAAAA TCCGGG GGTTCA CCCGGG GCAGGGCCGGCGCCG TERM 2178 1948953 - 1948925 - G 72 -3.7 -4.56597 | opp_overlap 1948925 CCGCTCCGGTAAAAA GCCCAAGGTGCCG TTC CGGGATCTTCAGC TTCTCTTCCCTTGGG Daud_1851 1950162 - 1949500 - | precorrin-3B C17-methyltransferase TERM 2179 1949803 - 1949785 - G 70 -7.3 -4.0616 | CAGGGCAAGGACAAA GTCGGCC TCGGC GGCCGCC CGCACCCTCCTCTTG Daud_1852 1951037 - 1950198 - | cobalamin (vitamin B12) biosynthesis CbiG protein TERM 2180 1950812 - 1950791 - G 73 -6.5 -4.37886 | gap 1, overlap 1950793 GCAGGCCCGACAAAA GGCGCACGGC GAT GCC-TGCGGC CATGACCAGCACCAG Daud_1853 1951770 - 1951027 - | precorrin-4 C11-methyltransferase Daud_1854 1952498 - 1951767 - | precorrin-2 C20-methyltransferase TERM 2181 1952220 - 1952239 + g 71 -5.6 -4.36914 | overlap 1952221 GACCACCTTCTCCCC CCGCCGGA CCCT TTCGGCGA TTTTCTCGGCGGCCG Daud_1855 1953145 - 1952495 - | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit Daud_1856 1954251 - 1953142 - | cobalamin biosynthesis protein CbiD TERM 2182 1953539 - 1953584 + g 71 -13.2 -3.01712 | opp_overlap 1953534 ACCTCAACGATCTGC TCCTCCG-CGGGCGGCGGCTGC AAGC GCCGC-GCCGCCCGGCGGCCGA TGTTGCCCGGGACCA Daud_1857 1954727 - 1954248 - | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 2183 1954294 - 1954276 - G 72 -4.5 -4.56597 | CCGCCGGCGCAAAAA TCGGGGA GCACT TCCACGA ACTCGCCCTGCCCGG TERM 2184 1954629 - 1954616 - G 100 -9.5 -4.83243 | opp_overlap 1954626 GGGAGAGAAAACAAA CCCGC ACCA GCGGG ATTCCGGTGATCTCC Daud_1858 1956384 - 1954759 - | cobalt ABC transporter, ATPase subunit TERM 2185 1955689 - 1955643 - G 78 -7.1 -4.57569 | gap 1, opp_overlap 1955643 1955679 GGACCTCTTCAAAAA GGTCCAGC-AGCCACGGCCTGA CCAG TCCGGCGGCGGCCAGAAGGACC TGGTTCCTGAAAACC TERM 2186 1956326 - 1956303 - G 73 -8.8 -4.07568 | gap 1 CTCCCCGGCGCAAAA CCGCGCTGACG CCC CG-CAGCCCGG GCGTGCCGTCCGGAT Daud_1859 1957157 - 1956384 - | cobalt ABC transporter, inner membrane subunit CbiQ Daud_1860 1957453 - 1957163 - | cobalt transport protein Daud_1861 1958124 - 1957450 - | cobalamin biosynthesis protein CbiM TERM 2187 1958078 - 1958059 - G 81 -10.6 -4.15044 | overlap 1958043 CCCGTGCGCAACAAA GGGCGCCG AGGC CGCCGCCC AAGCCAGCGCGTGGC TERM 2188 1958196 - 1958167 - H 100 -15.9 -4.86385 | opp_overlap 1958167, overlap 1958193 AGGGCGAAAAACAAA TCCCTGATCCGTT AGTG AACGAATCAGGGA TTACGTATTCAATCC TERM 2189 1958167 - 1958196 + H 87 -13.7 -3.19522 | opp_overlap 1958167 1958193 AGGGCGAAAAACAAA TCCCTGATCCGTT AGTG AACGAATCAGGGA TTACGTATTCAATCC TERM 2190 1959097 - 1959117 + H 71 -4.6 -4.63218 | opp_overlap 1959097 1959098, overlap 1959098 AGCGGTCTGAGAAAA TGTCACCC ATGAA GGGAGACG TTTTCTTGAAACCCA Daud_1862 1959123 - 1960451 + | integrase catalytic subunit Daud_1863 1963439 - 1960758 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 2191 1963568 - 1963516 - R 100 -7.9 -5.52986 | gap 1, opp_overlap 1963519, overlap 1963519 ATTTCAGCAAAAAAA CAACCCTTACCCAGCGA-ACACTT ACACGA AAGCGTCTCGCCAGGTAAAGGTCT TGCTCATCAGACATA TERM 2192 1963565 - 1963519 - R 100 -11.8 -4.8487 | gap 1, opp_overlap 1963519, overlap 1963516 TCAGCAAAAAAACAA CCCTTACCCAGCGA-ACACTT ACACGA AAGCGTCTCGCCAGGTAAAGG TCTTGCTCATCAGAC Daud_1864 1964118 - 1963708 - | hypothetical protein TERM 2193 1964207 - 1964152 - R 100 -14 -4.62069 | gap 2, opp_overlap 1964153, overlap 1964153 GCTTCACGTGAAAAA GGGGTCAGACCCCAGGGGGAGAGGGG GCCAGA CCCCTCTCCCCCC-GCG-CAGACCCT TTTTCACAGGTCCCC TERM 2194 1964153 - 1964206 + r 100 -15.3 -4.58395 | gap 2, opp_overlap 1964152 1964153 CTTCACGTGAAAAAG GGGTCAGACCCCAGGGGGAGAGGGG GCCAGA CCCCTCTCCCCCC-GCG-CAGACCC TTTTTCACAGGTCCC TERM 2195 1964206 - 1964153 - R 100 -17.5 -3.3692 | gap 2, opp_overlap 1964153, overlap 1964152 CTTCACGTGAAAAAG GGGTCAGACCCCAGGGGGAGAGGGG GCCAGA CCCCTCTCCCCCC-GCG-CAGACCC TTTTTCACAGGTCCC Daud_1865 1966776 - 1964296 - | leucyl-tRNA synthetase TERM 2196 1967173 - 1967155 - R 100 -8.1 -5.26875 | GGTGGAATTAAAAAA GCGCTCC CATAC GGAACGC GCCGTCCCCTCCTAC TERM 2197 1967328 - 1967302 - R 75 -3.7 -4.86621 | gap 1, opp_overlap 1967326, overlap 1967303 ATTCTCAATCAAAAA GCC-CTCACCCC GGCC AAGATGAGAGGC TTCAAGTCTTTTTTG TERM 2198 1967326 - 1967336 + r 84 -3.2 -5.32882 | opp_overlap 1967302 CCGGCCAAGATGAGA GGCT TCA AGTC TTTTTTGTAATGGTG Daud_1866 1967824 - 1967468 - | iojap-like protein Daud_1867 1968144 - 1967875 - | RNP1-like RNA-binding protein Daud_1868 1968802 - 1968170 - | nicotinate (nicotinamide) nucleotide adenylyltransferase TERM 2199 1968517 - 1968505 - G 71 -4.7 -4.49556 | opp_overlap 1968510, overlap 1968508 CGGTGATGAAATAAA CGACC TCC GGGCG GTACAGGCTTTGCAA Daud_1869 1969615 - 1968896 - | cell wall hydrolase/autolysin TERM 2200 1969264 - 1969281 + g 79 -8.3 -4.37092 | CCTCCGTGTGGATTG CCCGCCG TATG CCGCGGG TTTTCTCCGGCGCCT TERM 2201 1969379 - 1969360 - G 78 -3.4 -4.99035 | overlap 1969362 1969363 GTACCGACACAAAAA GATCGGCG CAGG CGGCGTTC GCCCGGCGAACCCGG Daud_1870 1970896 - 1969637 - | gamma-glutamyl phosphate reductase TERM 2202 1970090 - 1970072 - G 71 -8.1 -3.86015 | gap 1, overlap 1970073 GATTCCCGGCAGAAA CGCGGCCG CGAC CGGC-GCG TCCACCAGCAGGGTC Daud_1871 1971411 - 1970893 - | histidine triad (HIT) protein TERM 2203 1971177 - 1971232 + g 74 -10.4 -3.78934 | gap 1, overlap 1971198 CGAGCATCTCTTCTG CGGCCAGTTCCTCAATG-TCCCCAACG TGC CGTTTGGGAGCGACGAGCAAATGGCCG TTGTTGTAGGGGAAA Daud_1872 1972553 - 1971429 - | glutamate 5-kinase TERM 2204 1971645 - 1971663 + g 76 -9.6 -4.07568 | opp_overlap 1971638 CGCCACAACCCCCGA GGGCAAGA GAC TTTTGCCC TTTTCGCGCAGGGCC TERM 2205 1971921 - 1971939 + g 72 -11.6 -3.31144 | GGTGCCGTGCCGACT GCCGGCGG TTC CCGCCAGC TTCTCGACGTCCGGG TERM 2206 1972067 - 1972092 + g 74 -12.5 -3.29461 | overlap 1972064 CGGCGTCCATCAGCC CGGCCACCAGG GCGG CCAGGTGGTCG TTGTCGCCGAGCTTG Daud_1873 1973893 - 1972616 - | small GTP-binding protein TERM 2207 1972986 - 1973018 + g 74 -12.6 -3.28712 | gap 1, opp_overlap 1972978, overlap 1973002 TCGAACACCTCGTAA CGCCCGCCGGC-GGC CTCC GCCAGGCGCCGGGCG TTATCACGCGCCCCG TERM 2208 1973002 - 1973043 + g 74 -4.8 -4.63218 | opp_overlap 1972978, overlap 1972986 GCCCGCCGGCGGCCT CCGCCAGGCGCCGGGCGT TATCAC GCGCCCCGGGCAGGTCGG TTTTGTTGGCCGCCA Daud_1874 1974461 - 1973898 - | signal transduction histidine kinase regulating citrate/malate metabolism Daud_1875 1974743 - 1974468 - | hypothetical protein TERM 2209 1975029 - 1975053 + G 72 -13.5 -2.7094 | overlap 1975029 CATCGGATGCGCGGC TCTGCCGGCGG CCG TCGCCGGCAGC ATTCTCTGGCTGGCC TERM 2210 1975029 - 1975054 + G 74 -11.9 -3.51924 | gap 1, overlap 1975029 CATCGGATGCGCGGC T-CTGCCGGCGG CCG TCGCCGGCAGCA TTCTCTGGCTGGCCG Daud_1876 1974766 - 1975635 + | Na+/Pi-cotransporter Daud_1877 1976834 - 1975632 - | Serine-type D-Ala-D-Ala carboxypeptidase TERM 2211 1977201 - 1977178 - g 70 -10.2 -3.64703 | gap 1 TGGGTTTTACGGAAA CGC-CCCGGGC GCG GCCCGGCCGCG GAAAACGAAGGAGAC Daud_1878 1977016 - 1977303 + | hypothetical protein TERM 2212 1978318 - 1978298 - g 79 -9.6 -4.13767 | GGCTGCAGGCCAAAA CGGCCCGG GTGAT CCGGGACG GTCGGGAGGTGGACA TERM 2213 1978652 - 1978672 + G 79 -8.2 -4.37711 | CCGCCTATTTTGTCC CGGCGGTG GTGGG CACGGCCG TTTTGAGTTTCGTGC TERM 2214 1979137 - 1979149 + G 83 -6.9 -4.82901 | GGCCGCGCGTTGCTG GTCGG GAA CCGGC TTTTTATGGACGAGC Daud_1879 1977331 - 1979841 + | heavy metal translocating P-type ATPase TERM 2215 1979827 - 1979879 + T 74 -10.6 -3.53012 | gap 2, opp_overlap 1979846, overlap 1979828 1979829 1979833 1979846 CTGCGCTGGTTCAAA CCCGCC-CCTGC-CTAAAAAAGGGGC CAG GCCCCTTTTTCGGCGCCGGTGGTGTG TTTAACGGCGGACCG TERM 2216 1979828 - 1979875 + T 78 -12 -3.24232 | gap 1, opp_overlap 1979846, overlap 1979827 1979829 1979833 1979846 TGCGCTGGTTCAAAC CCGCCCCTGCCTAAAAAAGGGGC CAG GCCCC-TTTTTCGGCGCCGGTGG TGTGTTTAACGGCGG TERM 2217 1979829 - 1979877 + T 80 -11.8 -3.34398 | gap 2, opp_overlap 1979846, overlap 1979828 1979827 1979833 1979846 GCGCTGGTTCAAACC CGCC-CCTGC-CTAAAAAAGGGGC CAG GCCCCTTTTTCGGCGCCGGTGGTG TGTTTAACGGCGGAC TERM 2218 1979833 - 1979872 + T 72 -12.2 -2.80821 | gap 1, opp_overlap 1979846, overlap 1979828 1979829 1979827 1979846 TGGTTCAAACCCGCC CCTGC-CTAAAAAAGGGGC CAG GCCCCTTTTTCGGCGCCGG TGGTGTGTTTAACGG TERM 2219 1979858 - 1979846 - T 100 -10.5 -5.00616 | opp_overlap 1979833 1979828 1979829 1979827 1979846 CCCCTGCCTAAAAAA GGGGC CAG GCCCC TTTTTCGGCGCCGGT TERM 2220 1979846 - 1979858 + T 95 -10.5 -4.56775 | opp_overlap 1979846, overlap 1979833 1979828 1979829 1979827 CCCCTGCCTAAAAAA GGGGC CAG GCCCC TTTTTCGGCGCCGGT Daud_1880 1981041 - 1979881 - | peptidase S1 and S6, chymotrypsin/Hap TERM 2221 1981272 - 1981245 - R 86 -12.2 -3.91084 | gap 1, opp_overlap 1981246 1981252, overlap 1981252 CCAGGGTCAAGGAAA GAAAAAAGGGGGA CTG TCCCCC-TTTTTC AGTTTTGGTTATGTT TERM 2222 1981246 - 1981272 + r 72 -12.4 -2.58538 | opp_overlap 1981245 1981252, overlap 1981252 CAGGGTCAAGGAAAG AAAAAAGGGGGA CTG TCCCCCTTTTTC AGTTTTGGTTATGTT TERM 2223 1981266 - 1981252 - R 100 -11.4 -5.72053 | opp_overlap 1981246 1981252, overlap 1981245 CAAGGAAAGAAAAAA GGGGGA CTG TCCCCC TTTTTCAGTTTTGGT TERM 2224 1981252 - 1981266 + r 100 -11.4 -4.88222 | opp_overlap 1981252 1981245, overlap 1981246 CAAGGAAAGAAAAAA GGGGGA CTG TCCCCC TTTTTCAGTTTTGGT Daud_1881 1982183 - 1981296 - | CoB--CoM heterodisulfide reductase Daud_1882 1982771 - 1982184 - | heterodisulfide reductase subunit C TERM 2225 1983014 - 1983025 + r 74 -7.2 -4.08767 | overlap 1983012 AAAATCCTCATTCCG CCGC CCCC GCGG TTTTGCGGGGGTGGA Daud_1883 1985297 - 1983090 - | methyl-viologen-reducing hydrogenase, delta subunit TERM 2226 1984557 - 1984543 - G 74 -12.8 -3.28712 | TTCTTCGGGTCATAA GGCCGG GAT CCGGCC GCCAGCACGACAGCA Daud_1884 1986558 - 1985299 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2227 1985471 - 1985433 - G 85 -14.5 -3.55444 | overlap 1985441 CGGCTATGTCGGAAA CCACGAAACCGCCCGCG TCGGC CGCGGCCAGTTCCGAGG GGACCGGAGCTTCCA TERM 2228 1985463 - 1985441 - G 71 -8.3 -3.8901 | overlap 1985433 TCGGAAACCACGAAA CCGCCCGCG TCGGC CGCGGCCAG TTCCGAGGGGACCGG TERM 2229 1986628 - 1986596 - R 71 -9.8 -3.54414 | overlap 1986594 ATTGGGAACTAAACA CATAGTGGGGAGGC TGGAG GCCTCCCGTCTACG GCTGCTGGTGTATCC TERM 2230 1986764 - 1986722 - R 100 -22.8 -5.4505 | opp_overlap 1986729 TCTGTGAAGAAAAAA GGGAAGTCGCGGGCGAAATC CAG GATTTCGCCCGCGTTTCCCC TCTGGAAGCTACAGT TERM 2231 1986729 - 1986757 + r 100 -23.3 -3.63627 | opp_overlap 1986722 AGAAAAAAGGGAAGT CGCGGGCGAAATC CAG GATTTCGCCCGCG TTTCCCCTCTGGAAG Daud_1885 1988662 - 1986773 - | adenylylsulfate reductase, alpha subunit TERM 2232 1988127 - 1988138 + g 72 -7.2 -4.17762 | opp_overlap 1988117, overlap 1988118 CTGAAGCCGACCGCA CCGG CGAT CCGG TTGTTTTCCACAATC Daud_1886 1989152 - 1988715 - | adenylylsulfate reductase, beta subunit TERM 2233 1990260 - 1990240 - g 80 -5.3 -4.86001 | overlap 1990245 ATCAGGGTACAAAAA GAGGACCAG GAA CTGGACATC CTCAAGGAGCAGGTT Daud_1887 1989913 - 1990332 + | hypothetical protein TERM 2234 1990373 - 1990333 - T 78 -13.2 -2.50492 | gap 1, opp_overlap 1990338 1990350, overlap 1990317 1990332 1990330 1990348 1990365 GACGAGGACGAATAG GCCCCGCCAATCAGAGCGG CGCC CCGC-CGAAACGGCGGGGC GCCTTTAGTATCTCT TERM 2235 1990338 - 1990387 + T 74 -6.9 -4.37211 | gap 1, opp_overlap 1990317 1990333 1990332 1990330 1990348 1990365, overlap 1990350 GGACGAATAGGCCCC GCCAATCAGAGCGGCGCCCCGCCG AAA CGGCGGGGCGCC-TTTAGTATCTC TTTCTTCTACATTTC TERM 2236 1990378 - 1990348 - T 100 -19.6 -2.90075 | opp_overlap 1990338 1990350, overlap 1990333 1990332 1990330 1990365 GCCCCGCCAATCAGA GCGGCGCCCCGCCG AAA CGGCGGGGCGCCTT TAGTATCTCTTTCTT TERM 2237 1990350 - 1990376 + T 100 -26.6 -3.94989 | opp_overlap 1990333 1990332 1990330 1990348 1990365, overlap 1990338 CCCGCCAATCAGAGC GGCGCCCCGCCG AAA CGGCGGGGCGCC TTTAGTATCTCTTTC Daud_1888 1990738 - 1990394 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_1889 1992580 - 1990805 - | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein TERM 2238 1990959 - 1990971 + g 76 -10.5 -3.92178 | GTACGGTTGACGTAG CCCGG GTA CCGGG TTTCCTTCCGGTAGT TERM 2239 1992922 - 1992877 - R 77 -8.3 -4.13767 | gap 3, overlap 1992878 1992880 CGGGCGACCGGAAAA TTACGGCCGGCCGG-GC-GGGC TGGAG GCCCGGCGCCGGGCGGC-GTAC AGGAAGGCGCCGCTC TERM 2240 1992921 - 1992878 - R 76 -11.8 -3.08046 | gap 3, overlap 1992877 1992880 GGGCGACCGGAAAAT TACGGCCGGCCGG-GC-GGGC TGGAG GCCCGGCGCCGGGCGGC-GTA CAGGAAGGCGCCGCT Daud_1890 1993635 - 1992877 - | prolipoprotein diacylglyceryl transferase Daud_1891 1994156 - 1993668 - | molybdenum cofactor synthesis domain-containing protein Daud_1892 1994592 - 1994149 - | MOSC domain-containing protein TERM 2241 1994234 - 1994220 - G 73 -7.1 -4.26076 | GCACCTTCATGAAAA TGCCC TCCCG GGGCA TGATGCAGTCCCCCA Daud_1893 1995086 - 1994574 - | molybdenum cofactor biosynthesis protein C Daud_1894 1997053 - 1995131 - | molybdenum cofactor synthesis domain-containing protein TERM 2242 1995608 - 1995628 + g 73 -3.2 -4.70659 | gap 1, overlap 1995613 CAGGTTCAAAAGGAC CACC-CCCC GCCC GGGCAGGTG TTTTTGAATGTAGGA TERM 2243 1996051 - 1996025 - G 71 -8.6 -3.87815 | overlap 1996026 CTTCACCCGCACAAA CTCGTCCACCCC CAT GGGGGAGACGAC CCGCCGGGAGAGCAG TERM 2244 1997089 - 1997077 - R 95 -10.5 -4.57073 | opp_overlap 1997077, overlap 1997064 CACCCTTCCCAAAAA GGGGC CAG GCCCC TTTTTACCTTCTTTG TERM 2245 1997077 - 1997089 + r 100 -10.5 -4.8384 | opp_overlap 1997064 1997077 CACCCTTCCCAAAAA GGGGC CAG GCCCC TTTTTACCTTCTTTG TERM 2246 1997126 - 1997140 + r 73 -5.6 -4.59853 | opp_overlap 1997127, overlap 1997127 CCGGCGCTCCGAAAA AGGGGA CAG TCCCCC TTTTTGGGGGGTTAG TERM 2247 1997139 - 1997127 - R 89 -9.1 -4.56597 | opp_overlap 1997126 1997127 CGGCGCTCCGAAAAA GGGGA CAG TCCCC CTTTTTGGGGGGTTA Daud_1895 1998366 - 1997152 - | molybdenum cofactor synthesis domain-containing protein TERM 2248 1997454 - 1997442 - G 70 -10.5 -3.56092 | CCACCATTGCCGAAA CCGGG TGG CCCGG AAGCCCCACTACCAG TERM 2249 1998465 - 1998436 - H 100 -11.4 -4.83169 | gap 1, overlap 1998459 1998460 AGTGCCGCACAAAAA CCCGGGC-CGCGC GGAAA GCACAAGCCCGGG TTCAACCCGAAAAAA TERM 2250 1999302 - 1999275 - g 70 -7.6 -4.08767 | gap 1, overlap 1999276 GTTACTTCTCGAAAA TGCCGGGCGGCCG GAG CGGCCCCGCG-CA ATAGGCACGCCACCA Daud_1896 1998809 - 1999306 + | hypothetical protein TERM 2251 1999310 - 1999368 + F 100 -8.9 -5.49569 | opp_overlap 1999325, overlap 1999319 1999324 CCCGCGCAATAGGCA CGCCACCAGCACAAA-CGGGATCAGGCCC CAC GCGCCTGGTCCCGCTTTGTGTTTC-GGCA TTTTTTGTGTTAATG TERM 2252 1999319 - 1999360 + F 100 -18.9 -3.7046 | gap 1, opp_overlap 1999325, overlap 1999310 1999324 TAGGCACGCCACCAG CACAAA-CGGGATCAGGCCC CAC GCGCCTGGTCCCGCTTTGTG TTTCGGCATTTTTTG TERM 2253 1999324 - 1999354 + F 100 -13.2 -4.33258 | opp_overlap 1999325, overlap 1999319 1999310 ACGCCACCAGCACAA ACGGGATCAGGCCC CAC GCGCCTGGTCCCGC TTTGTGTTTCGGCAT TERM 2254 1999353 - 1999325 - f 100 -14.5 -3.99324 | opp_overlap 1999324 1999319 1999310 CGCCACCAGCACAAA CGGGATCAGGCCC CAC GCGCCTGGTCCCG CTTTGTGTTTCGGCA Daud_1897 1999472 - 2000155 + | two component transcriptional regulator TERM 2255 2001606 - 2001564 - g 82 -11.3 -4.08692 | overlap 2001596 2001599 CAACCTGGTGGAAAA CGCCGTCCGT-TTCTCCCCGC CGG GCGGGGAAATCACGGT-GGCG GCCGAAAAGCGGCCG TERM 2256 2001731 - 2001718 - g 71 -8.1 -3.86015 | TACCGCGTCGAGAAA TCCCG CGCC CGGGA GACCGGAGGCACCGG Daud_1898 2000158 - 2001873 + | multi-sensor signal transduction histidine kinase TERM 2257 2001925 - 2001887 - T 84 -13.8 -3.03338 | overlap 2001890 AGAAGCGGCCGAAGA CCATGCCGGTCGTGGTGG CCG CCACCACCACCAGCCCGA TATAGGTCAGCGCCT TERM 2258 2001922 - 2001890 - T 83 -14.1 -2.73994 | overlap 2001887 AGCGGCCGAAGACCA TGCCGGTCGTGGTGG CCG CCACCACCACCAGCC CGATATAGGTCAGCG Daud_1899 2002922 - 2001870 - | permease TERM 2259 2002443 - 2002402 - G 71 -5.6 -4.27441 | gap 1, overlap 2002406 AGGATCAGGAAGAAA GCCAGGGTTTGG-GCCGGG GGCTT CCCGGCGCCGGTCCCCGCC GCGGGATTAAAACCC TERM 2260 2002489 - 2002456 - G 85 -10.1 -4.25104 | gap 1, opp_overlap 2002467 GCCGCGGGATTAAAA CCCTGTCCGGCGGCGG CCG CCGCC-CCGGCCTTGG CCGCCTCTTCCCGGC Daud_1900 2003302 - 2002985 - | regulatory protein, ArsR TERM 2261 2003401 - 2003383 - R 100 -13.1 -4.74103 | CTGTCAAGTGAAAAA GGGCCGC ACCTG GCGGCCC CCGGGGGGCGGTCCA TERM 2262 2003488 - 2003469 - R 70 -7 -4.13206 | opp_overlap 2003478, overlap 2003470 ATGATGAAACAAGAA CCGGGCCA ACAC CGGCACGG CGTTGGTGGCCGCGT Daud_1901 2004111 - 2003503 - | hypothetical protein TERM 2263 2004119 - 2004101 - G 81 -6.7 -4.68593 | gap 1, opp_overlap 2004100 CGGAGCATGGAAAAA GCAGCTCG CAAA CG-GCTGC CCTCTTCTCATTTAA Daud_1902 2005480 - 2004266 - | peptidase M15D, vanX D-ala-D-ala dipeptidase TERM 2264 2005746 - 2005758 + H 100 -10.5 -5.19916 | opp_overlap 2005746 CAAAGAAGGTGAAAA GGGGC CTG GCCCC TTTTTTGACTCTTTT TERM 2265 2005758 - 2005746 - H 90 -10.5 -4.2573 | opp_overlap 2005746 CAAAGAAGGTGAAAA GGGGC CTG GCCCC TTTTTTGACTCTTTT TERM 2266 2006473 - 2006421 - g 74 -11.8 -3.49777 | gap 1, overlap 2006415 TCCGAGATAGGACAA CCCGCCCCGG-CCCCGCGGGCACCG CAAG CGCAACCCACGGAGCCCAACGCGGG AAATGTGGAGGACTA Daud_1903 2005842 - 2006489 + | hypothetical protein TERM 2267 2006692 - 2006674 - T 75 -6.7 -4.50988 | gap 1 TTAGAGGAAAAAGAA CCGCCGGA CGAA TCCG-CGG GAGAGAGGGGGGTTG TERM 2268 2006984 - 2006994 + T 72 -2.4 -4.91109 | GGAGATGGACCTTGT CGCC ATG GCCG TTTTTGTACTCGGCG Daud_1904 2008189 - 2007071 - | prephenate dehydratase TERM 2269 2007903 - 2007877 - G 70 -7.9 -4.05446 | overlap 2007880 CCTGGGAATGAGAAA TGATCCGGGTG ACCCG CTCCCGGCTCA CCCCCGGGCGGGCCA Daud_1905 2009168 - 2008203 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2270 2008293 - 2008307 + g 76 -5.6 -4.59773 | GTCCAGGGACTGCTT GCCGTC ACA GAGGGC TTTTTCGGGCTCCGG TERM 2271 2008386 - 2008442 + g 93 -7.3 -5.00616 | gap 3, overlap 2008390 GGACATCGGAGCGAC CAGTTCCGCCCTGCCGGTGG-CGT-GAC TCGG GTCGACGATCACCGGCAGG-TGGCTCAG TTTTTTCACCAGGGA TERM 2272 2008868 - 2008891 + g 81 -15.2 -3.10244 | overlap 2008865 CCTTCGCCCCGGACC CGGCCGCCGC CCGG GCCGCGGCCG TCATTTGTTCCCGGC TERM 2273 2009154 - 2009124 - G 100 -23.4 -5.66229 | overlap 2009148 ATTAAGAATAAAAAA GCCCGGCCTTCGTC CGG GACGAAAGCCGGGC TTCCGCGGTACCACC TERM 2274 2009247 - 2009274 + r 84 -2.7 -5.37593 | opp_overlap 2009248 2009267, overlap 2009248 CGGCGCAAATAAAAA ACTTTTCATCC CTGCAA GGACGAAAAGC TTTTTTGCTTTCCGC TERM 2275 2009273 - 2009248 - R 100 -9.1 -5.63517 | opp_overlap 2009247 2009248, overlap 2009267 GGCGCAAATAAAAAA CTTTTCATCCC TGCA AGGACGAAAAG CTTTTTTGCTTTCCG TERM 2276 2009400 - 2009413 + r 83 -9.5 -4.07568 | TCTCGGCCTACTTAC CCGCC TGCC GGCGG TTTTCAACCGGGCGA Daud_1906 2009778 - 2009443 - | hypothetical protein TERM 2277 2009708 - 2009744 + g 84 -2.7 -5.28942 | overlap 2009711 2009738 ATATGCACACGCACC CGAGATGCCACCGGGCG TTG CGCCGGTTGGCAAAATG TTTTTGTTTGGCGTA Daud_1907 2009811 - 2010071 + | hypothetical protein TERM 2278 2010216 - 2010262 + T 100 -14.4 -4.57569 | gap 1, overlap 2010221 AACTCGGTCTGGTTC CTTATTCTGGCCGCGCCCGCC CTGCCC GGCGGTCGCGGCCAGG-TCGG TTTTTCACCCGGTCC TERM 2279 2010221 - 2010258 + T 100 -22 -2.83903 | overlap 2010216 GGTCTGGTTCCTTAT TCTGGCCGCGCCCGCC CTGCCC GGCGGTCGCGGCCAGG TCGGTTTTTCACCCG Daud_1908 2012535 - 2010217 - | histidine kinase Daud_1909 2013617 - 2012700 - | inner-membrane translocator Daud_1910 2015612 - 2014089 - | hypothetical protein TERM 2280 2015177 - 2015194 + g 70 -7.7 -4.08042 | TCTCCAGTCTCTGCC GGAGGTT CCGC AGCCTCC TCTTTTTCTGGTGAA Daud_1911 2016240 - 2015590 - | DNA binding domain-containing protein TERM 2281 2015636 - 2015646 + g 75 -3.2 -4.82661 | overlap 2015626 ACCTCCCTTATTTTT GAGG TCA CTTC TTCTTTTTTCTTACT TERM 2282 2016500 - 2016488 - H 83 -6.2 -4.84359 | CCATTCCGACAAAAA CGGC TTAAT GCCG TACATCCGTAAATAC TERM 2283 2017114 - 2017150 + G 71 -9.3 -3.6968 | CCGGCCAACCGCCGG TTTCGCCCCCTCCGGCT GGA GGCCGGGGAGATCGAAA TTGTTGGGGTTGTAA Daud_1912 2016598 - 2017188 + | putative prophage repressor Daud_1913 2017226 - 2017522 + | hypothetical protein TERM 2284 2017647 - 2017663 + G 84 -2.1 -5.27477 | opp_overlap 2017635, overlap 2017649 AGATGCCCTGCGGGG CCTGGAC AAA GACCACG TTTTTTACTTCGAGT Daud_1914 2017585 - 2018430 + | hypothetical protein Daud_1915 2018883 - 2018569 - | hypothetical protein TERM 2285 2018704 - 2018720 + g 73 -2.9 -4.78572 | GCCGGCGGGCACAGT GAGAGTC ACC GACTTGC TTTTCTTGGTTGAAG Daud_1916 2018927 - 2019637 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_1917 2019979 - 2019743 - | hypothetical protein Daud_1918 2020523 - 2020263 - | hypothetical protein Daud_1919 2020801 - 2020520 - | hypothetical protein TERM 2286 2020918 - 2020894 - R 100 -10.8 -4.90906 | gap 1 TGACAATAGGAAAAA CGCCACGGCTA GTTA TA-CCGTGGCG TCACCACTTCAGACT TERM 2287 2021146 - 2021171 + r 70 -6.7 -4.19238 | gap 1, overlap 2021159 CCGGTCAATAAACCT GCTCCGGCGCGG CGG CCGCGC-GGCCC TTTTCGGCTTCGGCA Daud_1920 2022782 - 2021205 - | hypothetical protein Daud_1921 2023165 - 2022812 - | hypothetical protein Daud_1922 2024712 - 2023294 - | hypothetical protein TERM 2288 2023444 - 2023456 + g 74 -4.8 -4.67353 | CAGTTGGATTGCCTC GGCT CCGAC AGCC TTTTTCAGTAGGTCG TERM 2289 2024737 - 2024759 + r 100 -13.4 -4.1721 | overlap 2024738 CTCCTTTGGCGGGGA GGGCTTCCCC TCA GGGGAAGCCG TTTTGAGGTCTCACT TERM 2290 2024738 - 2024758 + r 100 -16.9 -3.09844 | overlap 2024737 TCCTTTGGCGGGGAG GGCTTCCCC TCA GGGGAAGCC GTTTTGAGGTCTCAC Daud_1923 2026464 - 2024845 - | NADH dehydrogenase (quinone) TERM 2291 2026441 - 2026482 + g 71 -9.2 -3.77832 | opp_overlap 2026443, overlap 2026443 GGTGCTGGTGCAGAC CAGGACCTGGGTGGGCGG GGCCAA CCGCCCATCCTGGAGCCG TTCTTCAATTTGGGG Daud_1924 2027041 - 2026487 - | NADH dehydrogenase (ubiquinone), 24 kDa subunit TERM 2292 2027291 - 2027268 - H 89 -13.2 -3.54459 | gap 1 TCAACTCTGGTCAAA CGGGGGCGTTC CTG GAA-GCCCCCG ATCATCCGGATAAGC TERM 2293 2027331 - 2027364 + H 81 -11.8 -3.55071 | gap 1, opp_overlap 2027331 2027330 2027328, overlap 2027331 2027334 GGCAACAGGAAACAC GCG-GGAGGGACCTT TCATC AAGGTCCCTCCTCCC TTTCCGCCGGTGTAA TERM 2294 2027331 - 2027363 + H 83 -14.2 -2.72829 | opp_overlap 2027331 2027330 2027328, overlap 2027331 2027334 GGCAACAGGAAACAC GCGGGAGGGACCTT TCATC AAGGTCCCTCCTCC CTTTCCGCCGGTGTA TERM 2295 2027363 - 2027331 - H 72 -12 -2.72568 | opp_overlap 2027331 2027331 2027334, overlap 2027330 2027328 GGCAACAGGAAACAC GCGGGAGGGACCTT TCATC AAGGTCCCTCCTCC CTTTCCGCCGGTGTA TERM 2296 2027334 - 2027360 + H 89 -16.7 -2.64274 | opp_overlap 2027331 2027330 2027328, overlap 2027331 2027331 AACAGGAAACACGCG GGAGGGACCTT TCATC AAGGTCCCTCC TCCCTTTCCGCCGGT TERM 2297 2027402 - 2027390 - H 83 -7.7 -4.62471 | opp_overlap 2027383 2027390 TGTAAGGGTCAAAAA GGTGT TTG ACACC TTTTAGGGTCTTTAG TERM 2298 2027390 - 2027402 + H 74 -7.7 -4.21827 | opp_overlap 2027390, overlap 2027383 TGTAAGGGTCAAAAA GGTGT TTG ACACC TTTTAGGGTCTTTAG TERM 2299 2027486 - 2027466 - H 74 -9.7 -3.76224 | opp_overlap 2027446 2027441 2027461 2027460 2027482 TTCTCAGGCAGCAAA GGGTGGC TTAGTGG GCCACCC TTGGGGTGTTTTCCT TERM 2300 2027482 - 2027494 + H 84 -9.1 -4.34402 | opp_overlap 2027466, overlap 2027461 2027460 GGTGGCTTAGTGGGC CACCC TTG GGGTG TTTTCCTGTCGCCGG TERM 2301 2029092 - 2029124 + G 76 -12.7 -3.45324 | gap 1, overlap 2029090 TCGCCACCGGCCTCC CGGCCTCACCCGGC TCGGCC GCCGGGA-AGGCCG TCTTTGATGCCGATA TERM 2302 2029547 - 2029527 - g 70 -12.5 -2.94912 | GCGGCAACGCAGACA CCCCGGCGG ACG CCGCCAAGG CCCGTGAGTTCGGCG TERM 2303 2029550 - 2029597 + G 70 -11.9 -3.18264 | gap 1 GACGCCGCCAAGGCC CGTGAGTTCGGCGCGGCCG-GC ATCGG GCTCTGCCGCACCGAGCACATG TTCATGGGTGCCGAC TERM 2304 2030395 - 2030414 + G 74 -13.6 -2.87132 | GGGGCGTTCCACCCG TCCCGACC TTCT GGTCGGGA TCTGTGGGGAGCACG Daud_1926 2027909 - 2030581 + | pyruvate, phosphate dikinase TERM 2305 2030615 - 2030633 + F 100 -8.8 -5.8187 | opp_overlap 2030613 CTTCCTGAAACATCG CCCCGC CAACCGT GCGGGG TTTTTTTCTTGGGTA TERM 2306 2030911 - 2030877 - g 73 -11.5 -3.5393 | ATCACCGCTTGGAAA GGAC-GCGCTGGCCCAG ATA CTGG-CCAACGCCGCCC TCGCCGCGGAAAACA TERM 2307 2031139 - 2031111 - g 77 -13.1 -3.56558 | opp_overlap 2031114, overlap 2031114 CAACACCAAGGACAA CACTCCGGCCGTG ATT CACTGCCGGATTG TGGACGGCGACAGAA TERM 2308 2031136 - 2031114 - g 71 -13.4 -2.60161 | opp_overlap 2031114, overlap 2031111 CACCAAGGACAACAC TCCGGCCGTG ATT CACTGCCGGA TTGTGGACGGCGACA TERM 2309 2031114 - 2031136 + G 77 -13.4 -3.28712 | opp_overlap 2031114 2031111 CACCAAGGACAACAC TCCGGCCGTG ATT CACTGCCGGA TTGTGGACGGCGACA Daud_1927 2030743 - 2031585 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit Daud_1928 2031620 - 2032183 + | tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit Daud_1929 2032287 - 2032925 + | fumarate reductase, cytochrome b subunit Daud_1930 2032922 - 2034709 + | succinate dehydrogenase or fumarate reductase, flavoprotein subunit Daud_1931 2034729 - 2035472 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 2310 2035474 - 2035515 + T 100 -5.9 -5.92399 | gap 1, opp_overlap 2035482, overlap 2035476 2035477 ACCGAAGGCAATAGT GGG-GAAGAGCCGACCAC CTACACC GAGGTCGGTTCTTCGTTC TTTTTTCTTTTCTTC TERM 2311 2035476 - 2035512 + T 100 -8.7 -4.94109 | opp_overlap 2035482, overlap 2035474 2035477 CGAAGGCAATAGTGG GGAAGAGCCGACCAC CTACACC GAGGTCGGTTCTTCG TTCTTTTTTCTTTTC TERM 2312 2035477 - 2035511 + T 81 -12.2 -3.52805 | opp_overlap 2035482, overlap 2035476 2035474 GAAGGCAATAGTGGG GAAGAGCCGACCAC CTACACC GAGGTCGGTTCTTC GTTCTTTTTTCTTTT Daud_1932 2036291 - 2035491 - | hypothetical protein Daud_1933 2036766 - 2037191 + | UspA domain-containing protein Daud_1934 2037341 - 2037595 + | hypothetical protein TERM 2313 2037628 - 2037654 + T 86 -10.9 -4.07568 | opp_overlap 2037633 ATTTTACTTAGCGAT GATAAGACCCC GGGAA GGGGCCTTATC TTTTCCCAGGGCGGC Daud_1935 2039078 - 2037933 - | spore germination B3 GerAC family protein TERM 2314 2039185 - 2039238 + r 74 -7.9 -4.07568 | gap 2, opp_overlap 2039214, overlap 2039188 GAGGTTCTACACCCC CTCCG-CGGCCGG-CCAGCGGCCGG AAGTCA CCGGCCGCCGGGCCGGCCGTCATCC TTTTGCCGGCGACGC TERM 2315 2039188 - 2039235 + r 100 -18.4 -3.08032 | gap 2, opp_overlap 2039214, overlap 2039185 GTTCTACACCCCCTC CG-CGGCCGG-CCAGCGGCCGG AAGTCA CCGGCCGCCGGGCCGGCCGTCA TCCTTTTGCCGGCGA TERM 2316 2039229 - 2039214 - R 71 -11.8 -2.52543 | opp_overlap 2039188 2039185 AGCGGCCGGAAGTCA CCGGCC GCCG GGCCGG CCGTCATCCTTTTGC Daud_1936 2041001 - 2039211 - | GerA spore germination protein TERM 2317 2040018 - 2039982 - G 70 -12.3 -3.14132 | gap 1 GTTGCCGTCCACCAA GATGGCCACCCGGCCC TCCACC AGGCCGG-CGGCCACC CGGTCGGGACGTTCG TERM 2318 2040664 - 2040675 + g 72 -7.2 -4.18494 | opp_overlap 2040654 2040656 AAGAAGACCAGCAGC GCCC GCCG GGGC TTTTGGGTGCCGATG TERM 2319 2040765 - 2040786 + g 76 -6.5 -4.41494 | GCGCTCGTTCTCATC CAGGCTGGT GGAA AGCGGCCTG TTTTCCTTCAGGATG TERM 2320 2041143 - 2041164 + r 95 -14.4 -3.4052 | overlap 2041127 GGGGCACGTAGCCTC GCGGCCGG CCAAGC CCGGCCGC TTACTTCCGTTGCCG Daud_1937 2042256 - 2041165 - | spore germination protein TERM 2321 2041719 - 2041694 - G 72 -4.5 -4.58395 | overlap 2041696 2041709 CCCAGGGTGGAAAAA GCGGCCCAGGA CAAA TCCAGCGCCCC CGGACCCCAGAGCGG TERM 2322 2042238 - 2042205 - G 73 -6.5 -4.25256 | gap 1, overlap 2042202 2042208 TGCTGAGGAAAACAA CGAGGAGCGCCACGGC CTC GCCGAAGCCCACC-CG CGGCGAACCGCTAGA TERM 2323 2042744 - 2042761 + G 80 -4.7 -4.84359 | overlap 2042745 TCTGGGTGCTGGTGT ACGGCCT GCTG GGGCCGC TTTTTATCCCGGTGC Daud_1938 2042437 - 2042895 + | hypothetical protein Daud_1939 2042913 - 2044040 + | hydrogenase (NiFe) small subunit HydA TERM 2324 2044423 - 2044442 + G 81 -16.4 -2.70932 | CCCGGACTACGTCCG GGGGCCGG AGTG CCGGCCCC TGGTTCCCCCGCCGA Daud_1940 2044052 - 2045479 + | hydrogen:quinone oxidoreductase TERM 2325 2045514 - 2045489 - f 72 -11.3 -3.06515 | gap 1, opp_overlap 2045496, overlap 2045496 TTCTAGCCCCAAAAG GCAAAAAGGGGC CAG GCCCCTTTTT-C GGGAGGAGGTAAAGA TERM 2326 2045496 - 2045508 + F 95 -10.5 -4.56597 | opp_overlap 2045489 2045496 CCCAAAAGGCAAAAA GGGGC CAG GCCCC TTTTTCGGGAGGAGG TERM 2327 2045508 - 2045496 - f 100 -10.5 -4.87318 | opp_overlap 2045496, overlap 2045489 CCCAAAAGGCAAAAA GGGGC CAG GCCCC TTTTTCGGGAGGAGG Daud_1941 2045533 - 2046093 + | (Ni/Fe) hydrogenase, b-type cytochrome subunit TERM 2328 2046140 - 2046099 - f 100 -19.4 -2.79796 | GCGCACCTGAGGACA CCCGGGCCGCCGTCCCCA CGATGT TGGGGACGGCGGCACCAG TCCCCGAACGTTAAA Daud_1942 2046179 - 2046880 + | hypothetical protein Daud_1943 2047312 - 2046863 - | CMP/dCMP deaminase, zinc-binding TERM 2329 2047100 - 2047126 + g 76 -13.7 -3.14132 | GGCCCGGCAGATTTC CTGGCGGTGCC CGCTC GGCACCCCCAG TTGCTCCCGCAGGCA Daud_1944 2047620 - 2048189 + | nitroreductase TERM 2330 2048649 - 2048692 + G 76 -5.9 -4.56597 | opp_overlap 2048648 2048649, overlap 2048687 GAGTATCGAAAACAC CCTCCGCCGGC-GGTCCCAGG ACAT CCTGG-ACAAGGCGGCCGGGG TTTTTGACACCCAGG Daud_1945 2048479 - 2048898 + | UspA domain-containing protein TERM 2331 2049179 - 2049215 + F 100 -16 -4.56607 | gap 2, opp_overlap 2049158 2049154 2049176 2049177, overlap 2049183 ATTGAAAAGCAACTT CC-GACCTCCCCGGC-CA GTC TGAGCCGGGGAGGTTTGG TTTTCTCGTTCCTAA TERM 2332 2049183 - 2049210 + F 100 -17.8 -4.29391 | gap 1, opp_overlap 2049154 2049176 2049177, overlap 2049179 AAAAGCAACTTCCGA CCTCCCCGGC-CA GTC TGAGCCGGGGAGG TTTGGTTTTCTCGTT TERM 2333 2049298 - 2049283 - g 86 -11.8 -4.16158 | CACAAAAAGATTAAA GCGGGG CAAA CCCCGC AAGAACAAGATGCCG TERM 2334 2049358 - 2049333 - g 75 -3.2 -4.86731 | GCCGGGGAAAGAAAA GTTCATCGTC GGTTTT GACGAAGTAC GGGTGCAAGACCTGG Daud_1946 2049259 - 2052606 + | pyruvate, water dikinase Daud_1947 2053022 - 2052726 - | hypothetical protein TERM 2335 2053295 - 2053305 + r 70 -6.8 -4.07568 | CCACGGCGGCTGCGG CCAG CAC CTGG TTTTCCGAAGCGCCG TERM 2336 2053536 - 2053569 + r 100 -21.9 -2.80307 | gap 1, opp_overlap 2053543, overlap 2053543 CTCGAACTACCTGGA GGAGAAAGCCGGCCCG GTA CGGGCCGGCTTT-TCC TGTGCTCAGCCTTTC TERM 2337 2053563 - 2053543 - R 100 -19.7 -3.96624 | opp_overlap 2053543 2053536 TACCTGGAGGAGAAA GCCGGCCCG GTA CGGGCCGGC TTTTCCTGTGCTCAG TERM 2338 2053543 - 2053563 + r 100 -19.7 -4.371 | opp_overlap 2053543, overlap 2053536 TACCTGGAGGAGAAA GCCGGCCCG GTA CGGGCCGGC TTTTCCTGTGCTCAG Daud_1949 2054269 - 2053589 - | metal dependent phosphohydrolase Daud_1950 2054697 - 2054371 - | diverged CheY-domain TERM 2339 2054827 - 2054815 - R 91 -4.1 -5.55855 | CGGAAAAAAAGAAAA GATTC CGC GAACC CGTAGCGGTCCCCCG TERM 2340 2054890 - 2054862 - R 95 -15.4 -3.21099 | opp_overlap 2054883, overlap 2054864 GTCCGGCAGCACGAA TACAGGAGGGGT TTGCC ACCCCTCCTGCA CTACCGGAGTCTTTT TERM 2341 2054888 - 2054864 - R 100 -15.8 -3.17051 | opp_overlap 2054883, overlap 2054862 CCGGCAGCACGAATA CAGGAGGGGT TTGCC ACCCCTCCTG CACTACCGGAGTCTT TERM 2342 2055068 - 2055090 + r 71 -7.6 -3.95022 | overlap 2055074 GCGCCGCAGCCGCAG CCGGATGACG AAC CGTCTTGCGG TTTCATCTTGCTCCG Daud_1951 2057256 - 2055214 - | ferrous iron transport protein B TERM 2343 2056352 - 2056341 - G 85 -5.8 -5.05113 | TGGACAGAAAGAAAA TCGG CATG CCGA GAAGGCGGTTGGTCA Daud_1952 2057542 - 2057303 - | FeoA family protein Daud_1953 2057788 - 2057546 - | FeoA family protein TERM 2344 2058033 - 2057997 - R 83 -10.9 -3.97019 | overlap 2057987 2058000 AGCAATCTTAAACAA GAACCCCCGGGGA GAGACCTGGCA TCCCCGGGAGTCC GCCGTCCAGTGGGTC TERM 2345 2058030 - 2058000 - R 80 -9 -4.1023 | overlap 2057997 AATCTTAAACAAGAA CCCCCGGGGA GAGACCTGGCA TCCCCGGGAG TCCGCCGTCCAGTGG TERM 2346 2058292 - 2058340 + r 76 -3 -5.00616 | opp_overlap 2058302, overlap 2058294 2058301 ACAACGACACCAGAC AATAGAAAAAGCAAGGCCTCCC AGGTC GGGAAGCCCTGCCATTACTATC TTTTTTGGAGGCGGC TERM 2347 2058330 - 2058302 - R 100 -15.3 -5.1764 | opp_overlap 2058301 2058294 2058292 CAGACAATAGAAAAA GCAAGGCCTCCCA GGT CGGGAAGCCCTGC CATTACTATCTTTTT Daud_1954 2059942 - 2058527 - | hypothetical protein TERM 2348 2058677 - 2058689 + g 74 -4.8 -4.67353 | CAGTTGGATTGCCTC GGCT CCGAC AGCC TTTTTCAGTAGGTCG TERM 2349 2059967 - 2059989 + H 100 -13.4 -4.1721 | overlap 2059968 CTCCTTTGGCGGGGA GGGCTTCCCC TCA GGGGAAGCCG TTTTGAGGTCTCACT TERM 2350 2059968 - 2059988 + H 100 -16.9 -3.09844 | overlap 2059967 TCCTTTGGCGGGGAG GGCTTCCCC TCA GGGGAAGCC GTTTTGAGGTCTCAC Daud_1955 2060346 - 2062082 + | transposase TERM 2351 2062236 - 2062219 - T 100 -10.5 -5.45802 | overlap 2062220 GCCGGAAAAGAAAAA CGCCCGC TGGA GCGGGCA CGTGACAGGAAAAGT TERM 2352 2062235 - 2062220 - T 86 -11.8 -3.86397 | overlap 2062219 CCGGAAAAGAAAAAC GCCCGC TGGA GCGGGC ACGTGACAGGAAAAG Daud_1956 2063132 - 2062281 - | phosphate binding protein TERM 2353 2062628 - 2062614 - G 73 -11.4 -3.54741 | opp_overlap 2062617, overlap 2062618 CACCATTTCCTCAAA GGCACC CCG GGTGCC GGAGCCTTCTTCGCG Daud_1957 2064049 - 2063327 - | phosphodiesterase Daud_1958 2064931 - 2064068 - | phosphate ABC transporter, inner membrane subunit PstA Daud_1959 2065806 - 2064934 - | phosphate ABC transporter, inner membrane subunit PstC TERM 2354 2065013 - 2065002 - G 76 -5.8 -4.56153 | overlap 2065003 TGACCATAAAAAGAA CCAC ACCG GTGG CAAAAAGGGCCCGGG Daud_1960 2066166 - 2065948 - | hypothetical protein Daud_1961 2067191 - 2066331 - | thiamine pyrophosphate binding domain-containing protein Daud_1962 2068389 - 2067205 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 2355 2068143 - 2068116 - G 91 -9 -4.56775 | gap 1, overlap 2068118 AGGTGGCGGTAAAAA CCCGGCCGCCACC CAG GGAGGCG-CCGTG CACGGCAGCCATAAC Daud_1963 2068777 - 2068583 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_1964 2069472 - 2068801 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit TERM 2356 2068916 - 2068935 + g 70 -7.8 -4.07568 | overlap 2068917 TCGTCCAGTGCCGCC GTCGTGGC GGAC GCCACGAA TTTTCCGCCACCGAA TERM 2357 2069218 - 2069197 - G 77 -3.7 -4.83615 | gap 1, overlap 2069198 CAGGCCGGAGAAAAA CGGCATAGTG TAG CACT-TGCCC AGGGTAATCACGTGA Daud_1965 2070328 - 2069456 - | thiamine pyrophosphate binding domain-containing protein Daud_1966 2071467 - 2070325 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Daud_1967 2072122 - 2071505 - | CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit Daud_1968 2072512 - 2072195 - | hypothetical protein Daud_1969 2073638 - 2072634 - | hypothetical protein TERM 2358 2073148 - 2073162 + g 77 -4.3 -4.93877 | CTCCTTGCCTGGGTC GAATC ACTCC GATTC TTTTCTTTAATCCAC TERM 2359 2073768 - 2073740 - R 81 -6.6 -4.68908 | GCGACGGAAAACAAA CGACCCCGGTCA GGACT CAATCGGGGCCG TCACTCACCCATCCC Daud_1970 2074274 - 2074014 - | hypothetical protein Daud_1971 2075323 - 2074382 - | hypothetical protein TERM 2360 2074637 - 2074611 - G 72 -7.9 -4.13767 | gap 1, opp_overlap 2074627 2074633 CGCCCGAGGCGAAAA GCGAGCCGGCGG ATGA CCGCGAGC-CGC GACGGATTCATATGG Daud_1972 2076561 - 2075362 - | phosphoribosylaminoimidazole carboxylase, ATPase subunit TERM 2361 2076437 - 2076415 - G 75 -4.1 -4.72272 | gap 1 GGCCTGCAGGAAAAA GTCC-GCAAC TTGA GCCGCCGGAC AACCAGCCACGGGGT Daud_1973 2077055 - 2076558 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 2362 2077324 - 2077304 - R 71 -4.6 -4.63218 | opp_overlap 2077304 2077305, overlap 2077305 TGGGTTTCAAGAAAA CGTCTCCC TTCAT GGGTGACA TTTTCTCAGACCGCT Daud_1974 2078126 - 2077773 - | hypothetical protein Daud_1975 2079436 - 2078252 - | hypothetical protein TERM 2363 2079375 - 2079336 - G 84 -8.4 -4.46212 | overlap 2079353 2079357 GGCGTGACCATAAAA GCGCCGCCGATACCGAAG TAAC CACCGATAACGCCGACGC AAAAGCCGATCATTA Daud_1976 2079696 - 2079502 - | hypothetical protein TERM 2364 2080840 - 2080815 - g 79 -13.4 -3.53091 | opp_overlap 2080818 ACGTGTCGTCCGAAA GTACGACGTC GCCATG GACGTCGTAC TGTACGAGATGATCG Daud_1977 2080258 - 2081925 + | transposase TERM 2365 2081995 - 2081984 - T 75 -5.8 -4.65895 | opp_overlap 2081982 2081984 CGCCCCACCTAAAAA CCAG AACC CTGG TGATTTTGTTCACAT Daud_1978 2082835 - 2082083 - | putative agmatinase Daud_1979 2083665 - 2082838 - | spermidine synthase TERM 2366 2082937 - 2082957 + g 86 -6.8 -5.00884 | CCGGATTTTTTCCGG CGCGACCT GGGCG GGGTCGTG TTTTTTGGAGCCGAT Daud_1980 2084149 - 2083691 - | arginine decarboxylase, pyruvoyl-dependent Daud_1981 2085183 - 2084320 - | xylose isomerase domain-containing protein Daud_1982 2085301 - 2086827 + | extracellular solute-binding protein Daud_1983 2087029 - 2086838 - | hypothetical protein TERM 2367 2087179 - 2087167 - R 90 -10.5 -4.36914 | opp_overlap 2087167 TCCCCGGGGAGAAAA GGGGC CTG GCCCC TTTTTCCGGGCGTTT TERM 2368 2087167 - 2087179 + r 95 -10.5 -4.58685 | opp_overlap 2087167 TCCCCGGGGAGAAAA GGGGC CTG GCCCC TTTTTCCGGGCGTTT Daud_1984 2088293 - 2087193 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_1985 2089187 - 2088402 - | methyltransferase type 11 TERM 2369 2089071 - 2089047 - G 80 -5.6 -4.72272 | gap 1, opp_overlap 2089051, overlap 2089049 CGCGTCGAGCAAAAA GTCTCCCGGCC CCAG GGCCAGG-GCC TCTCCCAGCCGCCGG Daud_1986 2090552 - 2089191 - | radical SAM domain-containing protein TERM 2370 2089238 - 2089227 - G 83 -7.2 -4.60797 | overlap 2089236 GTTGTACACACAAAA GGGC ACAA GCCC ACCGTCCGGTAAGAG TERM 2371 2090192 - 2090178 - G 74 -9.2 -3.85698 | opp_overlap 2090190 CTCCGGGGCCAGAAA GCCGGA ACC CCCGGC GTCGGCCAGGCAGGC Daud_1987 2091535 - 2090576 - | selenide, water dikinase TERM 2372 2091568 - 2091536 - H 71 -10.5 -3.16881 | opp_overlap 2091546 CAGGCAGCGCAGCAA GTGCGCCAGATCGGA ATG CCCGATCTTGCACGC TCAGCCCGAACCCGG Daud_1988 2091736 - 2092629 + | LysR family transcriptional regulator Daud_1989 2092884 - 2093513 + | hypothetical protein TERM 2373 2093559 - 2093591 + T 71 -7.8 -3.93092 | opp_overlap 2093566, overlap 2093561 2093564 TGGACATAAGCACCC CTTAATAGGCCGTT GGATA AACGGCCTATTATC TATTATTTTTATTAT TERM 2374 2093561 - 2093589 + T 95 -14.8 -3.51633 | opp_overlap 2093566, overlap 2093559 2093564 GACATAAGCACCCCT TAATAGGCCGTT GGATA AACGGCCTATTA TCTATTATTTTTATT TERM 2375 2093564 - 2093586 + T 86 -12.1 -3.83881 | opp_overlap 2093566, overlap 2093561 2093559 ATAAGCACCCCTTAA TAGGCCGTT GGATA AACGGCCTA TTATCTATTATTTTT TERM 2376 2094065 - 2094084 + T 71 -7.9 -3.98204 | overlap 2094079 CCATGCAACTCCAGA TCGGTCA TTACGT TGACCGA TTTATCGGTCTCTTT TERM 2377 2094079 - 2094094 + T 76 -9 -4.00443 | overlap 2094065 ATCGGTCATTACGTT GACCGA TTTA TCGGTC TCTTTTTCGTCATCA Daud_1990 2095206 - 2094847 - | hypothetical protein TERM 2378 2094909 - 2094899 - G 72 -2.4 -4.75174 | overlap 2094891 2094903 GACTCAACCGAAAAA CCAG TTA CGGG ACTCCCGGACAAGTG TERM 2379 2094936 - 2094961 + g 76 -8.3 -4.18018 | AGTGGTTGGGGGCGG TTACGTCTGCA ACAC TGCGGCCGTAA TTTTCGATCGCCCAC Daud_1991 2096301 - 2095417 - | radical SAM domain-containing protein Daud_1992 2096613 - 2096338 - | hypothetical protein TERM 2380 2096646 - 2096656 + H 70 -6.8 -4.07568 | opp_overlap 2096645 ATATTCTGGAAAACG TGGC ACC GCCA TTTTGCAGCCGAGCG Daud_1993 2097212 - 2097586 + | hypothetical protein Daud_1994 2098350 - 2097559 - | anaerobic ribonucleoside-triphosphate reductase activating protein Daud_1995 2100476 - 2098347 - | anaerobic ribonucleoside-triphosphate reductase TERM 2381 2098407 - 2098418 + g 76 -7.2 -4.26953 | GAATACTCTCCGCTG GCCG TATT CGGC TTTCTTCCCTTCGTT TERM 2382 2100444 - 2100456 + g 80 -4.8 -4.87291 | TTCGAAAGCTGCTAT GCGT CCGTC ACGC TTTTTGATTGAGGTA Daud_1996 2102801 - 2100537 - | 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase TERM 2383 2102298 - 2102288 - G 71 -8.2 -3.89346 | opp_overlap 2102289, overlap 2102289 GGCTCAGTTCATAAA GCGC TCG GCGC CACTCCGGAGCGTTT TERM 2384 2102289 - 2102310 + g 78 -6.5 -4.58283 | gap 1, opp_overlap 2102288 2102289 GCTCAGTTCATAAAG CGCT-CGGCG CCA CTCCGGAGCG TTTTTGGACAACTTG TERM 2385 2102538 - 2102549 + g 83 -7.2 -4.57073 | GAAATAGAGGGATAG GCCG TCGC CGGC TTTTTCAAACCGCTC TERM 2386 2102862 - 2102833 - R 91 -7.7 -5.01811 | TCACGAAATCAAAAA GACCCTACCCCGG TTAA CTTGGGGAGGGTC CCAGCATGCAAAATC Daud_1997 2104247 - 2103462 - | hypothetical protein TERM 2387 2103643 - 2103654 + g 73 -3.6 -4.77157 | GCGATTTGTTCGGCG CGCT GCCT GGCG TTTTTCGTGGCTTCG TERM 2388 2104135 - 2104121 - G 77 -2.1 -5.05782 | AGGCACCGGAAAAAA TCACC GTGCA GATGA TCAGACTGAGGCCCA TERM 2389 2104185 - 2104169 - G 90 -2.1 -5.42259 | opp_overlap 2104183 TCACCGCCAAAAAAA CCAGCTG AGG CGACCGG CTCGTGCTGTTTTCC Daud_1998 2104579 - 2104950 + | peptidoglycan-binding LysM TERM 2390 2105086 - 2105112 + F 84 -13.7 -3.05294 | opp_overlap 2105090, overlap 2105090 2105105 TACCTGGAAGCGCAC CAAAGGCCCGG GAACA CCGGGCCTTAG TCTTGGGCCGTTTAA TERM 2391 2105090 - 2105108 + F 84 -13.1 -3.36452 | opp_overlap 2105090, overlap 2105086 2105105 TGGAAGCGCACCAAA GGCCCGG GAACA CCGGGCC TTAGTCTTGGGCCGT TERM 2392 2105108 - 2105090 - f 86 -13.1 -3.76492 | opp_overlap 2105090 2105086 2105105 TGGAAGCGCACCAAA GGCCCGG GAACA CCGGGCC TTAGTCTTGGGCCGT TERM 2393 2105118 - 2105158 + F 100 -27.1 -3.59262 | opp_overlap 2105129, overlap 2105105 2105119 CGGGCCTTAGTCTTG GGCCGTTTAAACCCACCGG GTT CCGGTGGGTTTAAACGGCA TTTCAGAATATACAC TERM 2394 2105119 - 2105157 + F 100 -30.6 -2.75343 | opp_overlap 2105129, overlap 2105105 2105118 GGGCCTTAGTCTTGG GCCGTTTAAACCCACCGG GTT CCGGTGGGTTTAAACGGC ATTTCAGAATATACA TERM 2395 2105147 - 2105129 - f 100 -16 -3.53012 | opp_overlap 2105119 2105118 CTTGGGCCGTTTAAA CCCACCGG GTT CCGGTGGG TTTAAACGGCATTTC TERM 2396 2105290 - 2105270 - g 79 -11.1 -3.90112 | opp_overlap 2105269, overlap 2105271 GTGGCCGGAATGAAA CCCCACCGG AGG CCGGTGGAA ATAGTGTACCGGAGC Daud_1999 2105264 - 2105800 + | hypothetical protein TERM 2397 2105858 - 2105876 + F 90 -10.2 -4.32857 | opp_overlap 2105851 2105870 TAAAATAACCCCGAA GGCCGGTG AAA TGCCGGCC TTTCTCTTTCCGGCG TERM 2398 2106060 - 2106070 + G 100 -4.6 -5.626 | opp_overlap 2106060 CTGATGTTGGGAAAG CTGG CCG CCGG TTTTTTTATGGGCTC Daud_2000 2106048 - 2106905 + | cation diffusion facilitator family transporter TERM 2399 2107019 - 2107031 + F 71 -4.7 -4.62471 | GGCATCGGCACTTTT CGCCC TAT GGTCG TTTTTCGGGGTTGAA Daud_2001 2107194 - 2108078 + | hypothetical protein TERM 2400 2108771 - 2108759 - g 91 -3.3 -5.41746 | AATGGTGGAAAAAAA CATCG GTT CGGTG GTGGTGGTGGACCAG Daud_2002 2108190 - 2110115 + | cyclic nucleotide-binding protein TERM 2401 2110398 - 2110387 - g 83 -7.2 -4.56597 | overlap 2110388 GGTGGTGGTGAAAAA CGGG CGGC CCCG TCCCGAACAGGTCTT Daud_2003 2110139 - 2110882 + | DNA polymerase III, epsilon subunit TERM 2402 2110915 - 2110900 - f 78 -2.4 -5.17576 | overlap 2110901 2110902 GACCAAGGCAAAAAA CCGCGC TATT GCGCCA TTGCTGCCGCGACGC TERM 2403 2111055 - 2111038 - f 73 -6.3 -4.45664 | gap 1 TCAATTGAAGTAAAA GGAGCGTG GTA CAC-CTCC ATGGACGACCCCCTG TERM 2404 2112444 - 2112432 - g 71 -4.8 -4.41895 | AACCGCCAACTAAAA CTGG CGATC CCAG AGAGCGAGGAATACC Daud_2004 2111307 - 2112602 + | hypothetical protein Daud_2005 2113071 - 2112670 - | hypothetical protein Daud_2006 2113536 - 2113099 - | hypothetical protein TERM 2405 2113655 - 2113634 - R 100 -9.4 -5.24796 | opp_overlap 2113634 GGCATACAAGAAAAA CCCCGCCT TTGGAG AGACGGGG TTTTTCAAAGAGGCT TERM 2406 2113634 - 2113655 + r 83 -7.9 -4.56775 | opp_overlap 2113634 GGCATACAAGAAAAA CCCCGCCTT TGGA GAGACGGGG TTTTTCAAAGAGGCT Daud_2007 2115327 - 2113684 - | chaperonin GroEL TERM 2407 2113906 - 2113916 + g 73 -8.2 -4.00683 | opp_overlap 2113901 2113906 2113905, overlap 2113884 GGCGTCGAAACCAAC GCCC GCC GGGC TTTCCTTCACTTTTT Daud_2008 2115665 - 2115381 - | chaperonin Cpn10 TERM 2408 2115510 - 2115473 - G 71 -9.7 -3.74251 | opp_overlap 2115468 2115506 CATACTTGGAGTAAA GCACCTGGTCGCCGACC TTGA GGTCGATGGCCACGCGC TGCCCGTTATCGAGC TERM 2409 2115954 - 2115936 - R 100 -11.7 -4.98522 | opp_overlap 2115936 AATTTTATACAAAAA CGGACCG TGTTG CGGTCCG TTTTGTGTAGGGGAG TERM 2410 2115936 - 2115954 + r 95 -12.4 -4.52589 | opp_overlap 2115936 AATTTTATACAAAAA CGGACCGT GTT GCGGTCCG TTTTGTGTAGGGGAG Daud_2009 2116185 - 2115988 - | hypothetical protein Daud_2010 2116279 - 2117025 + | formate dehydrogenase family accessory protein FdhD Daud_2011 2117563 - 2116985 - | 5-formyltetrahydrofolate cyclo-ligase TERM 2411 2117171 - 2117148 - G 72 -4.4 -4.57341 | AACCGGTCGTAAAAA CCGCCGCCGA ACCC TAGGCGGTAG CCCTGATGGTCGAAG TERM 2412 2117332 - 2117352 + g 86 -12.5 -4.08767 | GCCGCCGCGCCCGGT CGGTGACCG GCA CGGCCACCG TTTTCCCGGCGTCAA TERM 2413 2117517 - 2117545 + g 100 -16.7 -4.08557 | GCTGGATCCAGGAGG CTGCGGGCCTTGA GCA TCGCGGCCCGCAG TTCTTGTTTGCCGCA Daud_2012 2118581 - 2117565 - | metalloendopeptidase glycoprotease family TERM 2414 2117726 - 2117684 - G 73 -13.3 -3.21276 | overlap 2117682 TGTCGGTGCAGAATA CGGGCGGCGGCACGGTG ACGCCGAAA CCCTCTGCCGCCGCCCG CCGCTCCAACTCCCG TERM 2415 2118337 - 2118314 - G 76 -7.3 -4.28361 | overlap 2118315 TCAACCCCACCAAAA GCGACCCGG CCAGAC CCGGGCCGT AGGTGACCGCGACCC Daud_2013 2119128 - 2119424 + | hypothetical protein TERM 2416 2119464 - 2119486 + T 100 -11.2 -5.08015 | CATTTTGACTCGACT GACCGGCGCC AAT GGTACCGGTC TTTATTTTTTAAATT TERM 2417 2119821 - 2119798 - T 95 -5.2 -5.42259 | overlap 2119799 2119801 CCACCGCTAAAAAAA TTACCCCCTG GGTC CAGGAGGCAC CCTGCCAACCAACCG TERM 2418 2119820 - 2119799 - T 73 -8.7 -3.84633 | overlap 2119798 2119801 CACCGCTAAAAAAAT TACCCCCTG GGTC CAGGAGGCA CCCTGCCAACCAACC Daud_2014 2120326 - 2119844 - | ribosomal-protein-alanine acetyltransferase Daud_2015 2121039 - 2120323 - | peptidase M22, glycoprotease TERM 2419 2120876 - 2120836 - G 70 -10.5 -3.54424 | CCGTAGGCCGGTAAA GGAACCGGGACCGGCG-GA AACAG CCACGCCG-TCCAGGTTCC CCTTCAACAGACCGG Daud_2016 2121512 - 2121036 - | hypothetical protein TERM 2420 2121442 - 2121418 - G 83 -12.1 -4.09556 | opp_overlap 2121417, overlap 2121434 TAGATGCAAATCAAA TCACCCGGCTC CAA GAGCCGGCCGA GTTCCTCGCCCACCT Daud_2017 2122531 - 2121518 - | thiamine-monophosphate kinase TERM 2421 2122037 - 2122010 - G 82 -11.2 -4.08557 | overlap 2122013 GTTTTGAAACAAGAA CAGCCCGGCAGC GCTC GCCCCCAGGCTG CCGGTGACGTAGAAC TERM 2422 2122549 - 2122564 + r 72 -11.8 -2.61264 | opp_overlap 2122540 2122542 2122543 2122545, overlap 2122548 2122559 2122560 CACAAACACCACCGC GGCGGG AAAT CCCGCC ATTATACCTAGAAGA Daud_2018 2124008 - 2122710 - | thiamine biosynthesis protein ThiC TERM 2423 2123411 - 2123400 - G 70 -7.2 -4.0896 | opp_overlap 2123399 AAACTCCTTGTAAAA CGGG TTTT CCCG GTCGTTGTGCAGCAT Daud_2019 2125067 - 2124009 - | thiamine-phosphate pyrophosphorylase TERM 2424 2124083 - 2124049 - G 72 -12.1 -3.34517 | gap 1, overlap 2124047 ATCGCTTCGCAAAGA GCGGCGGCAGCCAGAT TCGG ATCGGGC-GCCCCCGC CACCGCGCGCACCAC TERM 2425 2125109 - 2125096 - R 76 -9.5 -3.79071 | CTGAGAACATTCAAA CCCCC GGGA GGGGG GTAAATCAAAAAAGC TERM 2426 2125205 - 2125228 + r 77 -8 -4.08763 | TTTCTCAGCCCGTTT CCGGGCACCC CCAT GGGTAACCGG TTTGGTCTTTATTCT Daud_2020 2126641 - 2125478 - | amidohydrolase Daud_2021 2127407 - 2126655 - | peptidase C26 TERM 2427 2127764 - 2127779 + r 78 -11.8 -3.25823 | GGGTGGGGGTATGGT CGGCCC CCAA GGGCCG TTCGTCTAGAACCCC TERM 2428 2127818 - 2127853 + r 100 -11.9 -4.60255 | opp_overlap 2127818 AAGAGGACTGAAAAA TGGGGACTGTCCC CCTTTTCCCC GGGACTGTCCCCA TTTTTGACCCATTCT TERM 2429 2127853 - 2127818 - R 100 -11.9 -4.70266 | opp_overlap 2127818 AAGAGGACTGAAAAA TGGGGACTGTCCC CCTTTTCCCC GGGACTGTCCCCA TTTTTGACCCATTCT Daud_2023 2129282 - 2127951 - | glutamine synthetase, type I TERM 2430 2128191 - 2128204 + g 80 -5.9 -4.71828 | CTGGTCACAGGGCGG GGGCG GGGC CGTCC TTTTCTTGATGCCGT TERM 2431 2129345 - 2129311 - R 78 -13.7 -2.52464 | gap 2, overlap 2129321 CCTCCGTGTAATTCA TCTGGGGAAACCGACCG GTT CGG-CGGCTTCCCC-GA TAAATATACCACACC TERM 2432 2129495 - 2129473 - R 100 -12 -5.47218 | opp_overlap 2129471 2129456 2129493 CGTCACCGAAAAAAA TGACCGCGTT GCA ACCGCGGTCA AGTGGTTTGGGGGCA Daud_2024 2130265 - 2129525 - | glutamate synthase alpha subunit TERM 2433 2130102 - 2130078 - G 73 -7.1 -4.37886 | gap 1, opp_overlap 2130061 2130079 GGACCGTTCATAAAA GCG-GCCAGG TCGTTT CCCGGCACGC CGTTGATTACGATGC Daud_2025 2131985 - 2130393 - | glutamate synthase (NADPH) Daud_2026 2133061 - 2131982 - | glutamine amidotransferase, class-II TERM 2434 2133154 - 2133177 + r 78 -12.4 -3.21099 | ATGCGGCCGGCAGAC GCTCCGGCCA CCGT TGCCCGGAGC TTGGTGATACCGGCG Daud_2027 2134569 - 2133238 - | glutamine synthetase, type I TERM 2435 2134658 - 2134615 - R 100 -6.8 -5.76237 | gap 2, opp_overlap 2134627 2134627 2134629 2134655 GACACAAACAAAAAA CGCCCAATCA-AAGG-GGTG GTTTCA CACCTCCTTATGAAAGGGCG CCATTGCCTCTTATA Daud_2028 2135387 - 2134809 - | response regulator receiver/ANTAR domain-containing protein TERM 2436 2135480 - 2135445 - R 100 -17.7 -4.3453 | gap 1, opp_overlap 2135468 AAGCTCAAATACAAA TGCCC-CGCCAGACCG GACCA CGGTCTGGCAAGGGCA TCATCGCCTTTACCG Daud_2029 2137173 - 2135596 - | glutamate synthase-like protein Daud_2030 2138584 - 2137247 - | glutamate--ammonia ligase TERM 2437 2138656 - 2138613 - R 100 -11.1 -4.74103 | gap 1, overlap 2138616 TTTTCAACTCAAAAA GAACGCCCCAAGCAGACTCC GCACG GGAATCTACCTGGGACGC-C GTTGCCCCGAATTAC TERM 2438 2138654 - 2138616 - R 100 -16.1 -4.47888 | overlap 2138613 TCAACTCAAAAAGAA CGCCCCAAGCAGACTCC GCACG GGAATCTACCTGGGACG CCGTTGCCCCGAATT Daud_2031 2139325 - 2138729 - | response regulator receiver/ANTAR domain-containing protein Daud_2032 2140244 - 2139387 - | branched-chain-amino-acid transaminase TERM 2439 2139926 - 2139946 + g 76 -10.3 -3.90112 | TCGGTTCACCGGGGG CCGATCCGG TAC CCGGGGCGG TTTCCTTCCCGGCGG Daud_2033 2141770 - 2140241 - | para-aminobenzoate synthase, subunit I TERM 2440 2141193 - 2141218 + g 100 -11.8 -4.56597 | GTACTCCCGGGTACC CCGGGCTCCG GCGGGG CGGAGGCCGG TTTTTCAACCGCCGA TERM 2441 2141639 - 2141625 - G 74 -5.6 -4.39386 | overlap 2141626 GCGAAAGGATCAAAA GCGGCG AAA CACCAC CGGCCCGAGGCGTGC Daud_2034 2143120 - 2141960 - | major facilitator transporter TERM 2442 2142679 - 2142661 - G 74 -13.8 -2.82742 | overlap 2142658 ACTGCTCGACAATCA GGACCGCC ACG GGCGGCCC AGTGATGAGGGCGGT TERM 2443 2142845 - 2142830 - G 75 -11.8 -3.63843 | overlap 2142828 AATGAACGACAAATA GGCCGG CGAA CCGGCC AGCAGAATAAACAGC TERM 2444 2142963 - 2142941 - G 100 -13.4 -4.72188 | GGAAGCGAAAAGAAA CCGGAACAGC ACC GCCGCTCCGG CCAGAAGGGTATTGT TERM 2445 2143225 - 2143213 - H 73 -5.5 -4.57569 | opp_overlap 2143207 2143213 GGACTGTCCCAAAAA GGCGT CAG ACACC TTTTTCTTTTGCGTT TERM 2446 2143213 - 2143225 + H 89 -3.3 -5.49568 | opp_overlap 2143213, overlap 2143207 GGACTGTCCCAAAAA GGCGT CAG ACACC TTTTTCTTTTGCGTT TERM 2447 2144271 - 2144287 + G 70 -7.9 -4.07568 | GTATCCTCAGCCTCC CGACGCG GCC CGAGTCG TTTTCGAGAAGCCCC Daud_2035 2143360 - 2144391 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Daud_2036 2145487 - 2144372 - | hypothetical protein TERM 2448 2144952 - 2144964 + g 85 -3.3 -5.31519 | AGGCGGTCCGAGATT CTGCT CCG GGCGG TTTTTGTTTCGGTCT TERM 2449 2145535 - 2145516 - R 82 -5.6 -5.06414 | opp_overlap 2145502 2145516 CCCGGTCAAGAAAAA CCGGTCTC TTTA GAACCCGG TCTTATTAGTTTTAT TERM 2450 2145659 - 2145633 - R 89 -3 -5.59534 | gap 1, opp_overlap 2145650 2145650, overlap 2145620 AATGACAACAAAAAA GCCAGAGA-GT CCTAAC ACGCCCCTGGC CGTTTGTTGCCAAAC Daud_2037 2146967 - 2145837 - | hypothetical protein Daud_2038 2147655 - 2146945 - | sigma-70 region 2 domain-containing protein Daud_2039 2147792 - 2148472 + | CRP/FNR family transcriptional regulator TERM 2451 2148932 - 2148947 + G 83 -7.5 -4.57073 | opp_overlap 2148932 2148931 ACGGCACAAGAATAT CCCCG TTCCCC CGGGG TTTTTGGGACACCTG Daud_2040 2148582 - 2149166 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2452 2150892 - 2150865 - g 76 -9.8 -3.89215 | CCCGATAAATTGAAA GGCCGAAAGTAC TATC GCCCTTCCGGCC AGGGAATGGAAAGAA Daud_2041 2149611 - 2150918 + | ATPase central domain-containing protein Daud_2042 2152038 - 2150938 - | VanW family protein TERM 2453 2152325 - 2152313 - g 72 -4.1 -4.59773 | overlap 2152316 CTGGAGGCCGAAAAA TGACC GAA GATCA GGCGGCAGTGAAGAA TERM 2454 2153809 - 2153847 + G 82 -14.7 -3.30124 | gap 2 GACCGCGTGCGCCGG CACCTGGAGAGCCGGACCG AAC CGGTCCGG--CTCAAGGTG TTCTCCGGCGTGGAA TERM 2455 2154111 - 2154080 - g 93 -14.4 -4.07568 | gap 1 CGCGGCCGCGGAAAA CCCGGCTGGTGGCCG TGC CGACCACCT-CCGGG AGCGGCTCCGAGGTC Daud_2043 2152312 - 2154888 + | iron-containing alcohol dehydrogenase TERM 2456 2154920 - 2154893 - T 100 -20.6 -4.65895 | opp_overlap 2154893 GGGCCTATTGAAAAA CCCCACCCGCCG CCAC CGGCGAGTGGGG TTTCGAGGAAGCCAG TERM 2457 2154893 - 2154920 + T 100 -18.4 -3.53012 | opp_overlap 2154893 GGGCCTATTGAAAAA CCCCACCCGCCG CCAC CGGCGAGTGGGG TTTCGAGGAAGCCAG Daud_2044 2155181 - 2154951 - | hypothetical protein TERM 2458 2155664 - 2155640 - R 77 -11.5 -3.54424 | opp_overlap 2155646, overlap 2155646 TCTTACCTCCGGAAA GAAAAAGGGGC CAG GCCCCTTTTTT TCTAGTCCGCATTTT TERM 2459 2155658 - 2155646 - R 100 -10.5 -5.27335 | opp_overlap 2155646, overlap 2155640 CTCCGGAAAGAAAAA GGGGC CAG GCCCC TTTTTTTCTAGTCCG TERM 2460 2155646 - 2155658 + r 100 -10.5 -5.67063 | opp_overlap 2155646 2155640 CTCCGGAAAGAAAAA GGGGC CAG GCCCC TTTTTTTCTAGTCCG Daud_2045 2156592 - 2155666 - | GTP-binding protein Era TERM 2461 2155818 - 2155843 + g 72 -3.9 -4.5442 | overlap 2155822 TGCTTTTCAGCATCC GGCCGCCCT CCCCGATC AGGATGGCC TTTTGTGATTCCCGC TERM 2462 2156180 - 2156192 + g 73 -3.3 -4.71426 | opp_overlap 2156170, overlap 2156181 AGAAGCCTAGGCTTC GCGAC CAG GTCGA TTTTGTTGATCACCA Daud_2046 2157494 - 2156589 - | cytidine deaminase TERM 2463 2157043 - 2157007 - GR 83 -7.9 -4.57569 | opp_overlap 2157007 2157015 2157030 GTATCGGCGGAAAAA GGAGGACTGTCCCCC TTTTCCC AGGGGACTGTTCCCC TTTTTCCCAGCACGG TERM 2464 2157030 - 2157043 + gr 87 -8.1 -4.56597 | opp_overlap 2157007, overlap 2157015 GTCCCCCTTTTCCCA GGGGA CTGT TCCCC TTTTTCCCAGCACGG Daud_2047 2159628 - 2157451 - | metal dependent phosphohydrolase TERM 2465 2157774 - 2157805 + gr 100 -4.5 -5.56568 | overlap 2157770 TCTGGGGTTTGGGAC CCTCGTAGC-GGAAG TCCT CTTCCCGC-ACCAGG TTTTTTTCATCCTGT TERM 2466 2158336 - 2158326 - GR 72 -2.4 -4.75472 | CGGACATCAACAAAA GGCC CCA GGAC GTATCGGTCACCAGG TERM 2467 2159557 - 2159539 - GR 83 -5.8 -4.94672 | opp_overlap 2159541, overlap 2159541 AAACAACAGGAAAAA CAGGGCCG CAC CCGCCCGG CGGACCTTCTGACTG Daud_2048 2160608 - 2159637 - | PhoH family protein TERM 2468 2160235 - 2160215 - G 100 -9 -5.08824 | GGCCGATGGAAAAAA CCACGTCC TTTTC GGACATGG CCCGGACGTATCTCT Daud_2049 2161860 - 2160643 - | putative stage IV sporulation YqfD TERM 2469 2161471 - 2161460 - G 83 -7.2 -4.56597 | GCGCCGCGGTAAAAA CCGG CTTC CCGG GCGGCTTGGAGAATT TERM 2470 2161611 - 2161570 - G 100 -11.4 -4.72272 | overlap 2161554 2161552 CGCGGTCAGGAAAAA GACCACGCCCAGGGCCAG CGTCTT CCGGCGCCGGGCCCGGCC CAGGAAGAAGGGCAG TERM 2471 2161958 - 2161913 - R 100 -22.1 -2.53263 | gap 1, opp_overlap 2161919 2161929, overlap 2161929 GTGACCGGCAAGGCA TACCC-ACCCCCAAAAAGGGGC CTG GCCCCTTTTTGGGGGTTAGGTG AAGCTTAAGCTCTCG TERM 2472 2161919 - 2161951 + r 100 -26.5 -3.06831 | opp_overlap 2161913 2161929, overlap 2161929 GGCAAGGCATACCCA CCCCCAAAAAGGGGC CTG GCCCCTTTTTGGGGG TTAGGTGAAGCTTAA TERM 2473 2161941 - 2161929 - R 95 -10.5 -4.60041 | opp_overlap 2161929 2161919, overlap 2161913 ACCCACCCCCAAAAA GGGGC CTG GCCCC TTTTTGGGGGTTAGG TERM 2474 2161929 - 2161941 + r 95 -10.5 -4.62471 | opp_overlap 2161913 2161929, overlap 2161919 ACCCACCCCCAAAAA GGGGC CTG GCCCC TTTTTGGGGGTTAGG Daud_2050 2162233 - 2161952 - | hypothetical protein TERM 2475 2162265 - 2162240 - R 90 -4.5 -5.31456 | CCAACCCATAAAAAA CCCCCCCCTTG AAAT CTATGCGGGGG AGGAAGTCTGAAAAC TERM 2476 2162339 - 2162319 - R 74 -10.4 -3.48822 | opp_overlap 2162317 2162313, overlap 2162312 CATAATAACGGAGAA GCCCGGTC GCTTG AACCGGGC CCTGCTATTCCTTCA TERM 2477 2162411 - 2162422 + r 78 -2.2 -5.17507 | gap 1, overlap 2162411 CGCTTGCGCCTGCGC G-CCG CTT CGGAC TTTTTCTTCCGTTTT Daud_2051 2162565 - 2162386 - | ribosomal protein S21 Daud_2052 2162985 - 2162641 - | histidine triad (HIT) protein Daud_2053 2164360 - 2163008 - | MiaB-like tRNA modifying enzyme TERM 2478 2163992 - 2163980 - G 95 -10.5 -4.59773 | opp_overlap 2163980 CCCCACTGCCAAAAA GGGGC CAG GCCCC TTTTTTTCGGCGGGT TERM 2479 2163980 - 2163992 + g 100 -10.5 -5.40474 | opp_overlap 2163980 CCCCACTGCCAAAAA GGGGC CAG GCCCC TTTTTTTCGGCGGGT Daud_2054 2165172 - 2164423 - | hypothetical protein TERM 2480 2164545 - 2164518 - G 71 -9 -3.75535 | gap 1, opp_overlap 2164519, overlap 2164494 2164512 2164519 CCAGAGAGACGGAAA CCGCGCCGCGGGC GGT GGCCGCGGC-CGC CTCTTCGGGGGTGAA TERM 2481 2164544 - 2164519 - G 70 -12.5 -2.84839 | gap 1, opp_overlap 2164519, overlap 2164494 2164512 2164518 CAGAGAGACGGAAAC CGCGCCGCGGGC GGT GGCCGCGGC-CG CCTCTTCGGGGGTGA TERM 2482 2164682 - 2164663 - G 80 -5.6 -4.8048 | gap 1, overlap 2164664 CTCCCAGAGGAAAAA GGCCGCGCC CCC GGCG-GGCA ACCGCTTCAGGGCAT Daud_2055 2166029 - 2165169 - | ribosomal protein L11 methyltransferase TERM 2483 2165263 - 2165233 - G 72 -7.4 -4.14243 | opp_overlap 2165234 2165250, overlap 2165234 2165236 GACTCGATCCGAAAA TCATTGGCCGCCAG CGC CCGGCGGACTATGT CTTCCCGTTTGTCCA TERM 2484 2166140 - 2166166 + r 78 -13.8 -2.62246 | opp_overlap 2166130 2166146, overlap 2166146 CTTAACCGTTTTATT ACAAAAGGGGGA TTG TCCCCCTTTTGC CTTCCTTGACCTTCA TERM 2485 2166146 - 2166160 + r 91 -11.4 -4.32201 | opp_overlap 2166130 2166146, overlap 2166140 CGTTTTATTACAAAA GGGGGA TTG TCCCCC TTTTGCCTTCCTTGA TERM 2486 2166160 - 2166146 - R 93 -11.4 -4.46212 | opp_overlap 2166146 2166140, overlap 2166130 CGTTTTATTACAAAA GGGGGA TTG TCCCCC TTTTGCCTTCCTTGA TERM 2487 2166186 - 2166196 + r 82 -5.4 -5.02074 | opp_overlap 2166186 CTTGACCTTCAAAAG GTGT CTG ACAC TTTTTTAGCCCATGA Daud_2056 2167325 - 2166201 - | chaperone protein DnaJ TERM 2488 2167112 - 2167092 - G 71 -8.1 -3.84719 | ATCCTCAAAGTTAAA GCCCTGCCC CTC GGGCCCGGC GTGACCGAAGCGGTC TERM 2489 2167166 - 2167122 - G 84 -16.4 -3.05384 | gap 1, opp_overlap 2167163 2167164 CCCGGCGTGACCGAA GCGGTCGTACTGGGCG-CGCC GCTC GGGGTCGCCCAGTACCGCCGC CGCCTCGGCGATTTC TERM 2490 2167353 - 2167371 + r 95 -14.6 -3.52207 | opp_overlap 2167348, overlap 2167348 2167349 CACGCAAGAATCCCG GCAGGGGA TTT TCCCCTGC TTCATTCTACTTTAC Daud_2057 2169201 - 2167378 - | chaperone protein DnaK TERM 2491 2168237 - 2168279 + g 71 -4.7 -4.51799 | gap 2 AACCTCCTCACCGCC TCCTGCACGGACGGCATGCGC GTC GCGCC-GCCCACCA-GCAGGA TTTTGTCGATTTGCT Daud_2058 2169778 - 2169194 - | GrpE protein TERM 2492 2169748 - 2169758 + g 84 -8.2 -4.42238 | overlap 2169745 CGGTTTCCACCTGGT CGGC ATG GCCG TTTTCGTTGCGGTCA Daud_2059 2171342 - 2169771 - | chaperonin Cpn60/TCP-1 Daud_2060 2172615 - 2171581 - | heat-inducible transcription repressor HrcA TERM 2493 2172581 - 2172591 + g 82 -3.2 -5.17576 | TCGAGGACTATGGCC CGGA GGA TCTG TTTTTTCCGTTCGTC Daud_2061 2174591 - 2172783 - | GTP-binding protein LepA TERM 2494 2173256 - 2173276 + g 79 -15.5 -2.82987 | overlap 2173249 GCATCTCGTAGGTGA TCAGCACCC GGT GGGTGCTGA TGTACTCCATGTTCC Daud_2062 2175685 - 2174819 - | LmbE family protein Daud_2063 2176835 - 2175657 - | glycosyl transferase, group 1 Daud_2064 2177276 - 2177019 - | hypothetical protein TERM 2495 2177317 - 2177298 - R 80 -5.6 -4.9725 | ACCTCCATAGAAAAA GGAGCGCC TACC GACACCCC TGTTTGCTGCTTGCC Daud_2065 2178338 - 2177367 - | stage II sporulation P family protein TERM 2496 2178411 - 2178374 - R 71 -7.8 -4.03234 | gap 1, opp_overlap 2178374 TTCGGCGCAGACAAA TCCCCCCTCTC-CGG ATGTGTACG CCGCAAAAGGGGGGA TTATGCTCTAGCGCA Daud_2066 2178778 - 2178419 - | hypothetical protein TERM 2497 2178691 - 2178681 - G 78 -4.6 -4.77165 | CCGGCGACAACAAAA CCGG GAA CCAG CCAACTCAACAAGAG TERM 2498 2178763 - 2178779 + g 74 -5.1 -4.60041 | opp_overlap 2178763 TCCACTGGGAACGAA CATTGCT TTC AGCCATG TTTTTACACCTCCCT Daud_2067 2178915 - 2179181 + | ribosomal protein S20 TERM 2499 2179252 - 2179265 + T 81 -8.1 -4.36914 | opp_overlap 2179241, overlap 2179240 ACAAGCCTCGGCGTT TCGGC CGGG GCCGA TTTTATCCCAACCGC Daud_2068 2180322 - 2179315 - | DNA polymerase III, delta subunit TERM 2500 2179956 - 2179974 + g 100 -16 -4.56597 | GGTACAGCTTTTTCC GCCGGTCC ACG GGACCGGC TTTTTGCAGAACGAG Daud_2069 2180629 - 2180324 - | hypothetical protein Daud_2070 2183103 - 2180647 - | DNA internalization-related competence protein ComEC/Rec2 TERM 2501 2180892 - 2180877 - G 80 -4.6 -4.84017 | opp_overlap 2180882 2180883, overlap 2180879 AATCCGGCACAAAAA CCCCAC TGCC GTGGTG CGGCACTTTCAGCAC TERM 2502 2182006 - 2181955 - G 76 -13.5 -3.2218 | opp_overlap 2181958, overlap 2181947 2181958 2181984 CGGAACAGCCAGGAA CCAGCCGGCGGCGGGACTCCACC AGGAAA GGCGCCAACCCGCCGCCAGCTTG TCGAGACCGCGGACG TERM 2503 2182003 - 2181958 - G 72 -13.8 -2.79842 | opp_overlap 2181958, overlap 2181947 2181955 2181984 AACAGCCAGGAACCA GCCGGCGGCGGGACTCCACC AGGAAA GGCGCCAACCCGCCGCCAGC TTGTCGAGACCGCGG TERM 2504 2182810 - 2182794 - G 76 -11.5 -3.68351 | CCGCGAGGATGTAAA CCACCCG GTC CGGGCGG ACATCGGCGTCCCGG Daud_2071 2183756 - 2183184 - | helix-hairpin-helix repeat-containing competence protein ComEA TERM 2505 2183916 - 2183891 - R 76 -9.7 -3.8482 | TAAAACCAACGGAAA GGGGCTGGG GAAATACT CCCAACCCC TGAAAGGGGTCACCC TERM 2506 2183922 - 2183950 + r 87 -8.2 -4.56597 | gap 2, opp_overlap 2183922 2183923 2183938, overlap 2183938 TCCCAACCCCTGAAA GGGGTC--ACCCCT GAA AGGGGTCAGGCCCC TTTTTAACACGAAAA TERM 2507 2183982 - 2183938 - R 100 -24.6 -3.55444 | opp_overlap 2183922 2183938, overlap 2183923 2183960 2183970 GGGTCACCCCTGAAA GGGGTCAGGCCCCTTTTT AACACGAAA AAAAAGGGGCCTGACCCC TTTTTCTTAAACGGC TERM 2508 2183938 - 2183982 + r 100 -24.6 -5.06414 | opp_overlap 2183923 2183938 2183960 2183970, overlap 2183922 GGGTCACCCCTGAAA GGGGTCAGGCCCCTTTTT AACACGAAA AAAAAGGGGCCTGACCCC TTTTTCTTAAACGGC TERM 2509 2183982 - 2183970 - R 100 -6.9 -5.94597 | opp_overlap 2183938, overlap 2183938 2183960 TAACACGAAAAAAAA GGGGC CTG ACCCC TTTTTCTTAAACGGC Daud_2072 2184669 - 2184391 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daud_2073 2185237 - 2184650 - | pyruvate/ketoisovalerate oxidoreductase, gamma subunit TERM 2510 2184969 - 2184956 - G 74 -5.9 -4.41616 | opp_overlap 2184968 ATCGTCGTAAATAAA GACCG TCTC CGGCC CGACGTACTGACGGG Daud_2075 2187223 - 2186081 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein TERM 2511 2186276 - 2186296 + g 85 -15.4 -3.53224 | opp_overlap 2186237 TTCCGCGACCAGCAG GCGGCCGG CCCGC CCGGCCGC TTTCCGGAGCGCCTC Daud_2076 2187957 - 2187244 - | hypothetical protein TERM 2512 2187649 - 2187707 + g 74 -12.3 -3.53012 | gap 2, opp_overlap 2187627 2187625 2187648, overlap 2187649 CGGACGGCGCAACAC C-CACCGGGC-CTCGGCCTTGAGGGTGCC CCC GGCCTCCCCGAGGCCCAGCGTCCGGCGCG TTTCCCAGGCGACCA TERM 2513 2187955 - 2187932 - G 70 -11.7 -3.24823 | overlap 2187930 AAGCCCCAAAAAGCA GCCGGGGAA ACAAGG CTCCCCGGC ATAGAATCCCACGAT Daud_2077 2188954 - 2188028 - | transketolase, central region Daud_2078 2189925 - 2189110 - | transketolase domain-containing protein TERM 2514 2189773 - 2189733 - G 89 -16.1 -3.48593 | gap 1, opp_overlap 2189738, overlap 2189737 GACCCTTCGAGAGAA CGAACCGGTCCCGGTCCG GCCAGT CGGGCCGGG-CCGGATCG AGGCGCATCTCCTTG TERM 2515 2189769 - 2189737 - G 79 -14.1 -3.49618 | gap 1, opp_overlap 2189738, overlap 2189733 CTTCGAGAGAACGAA CCGGTCCCGGTCCG GCCAGT CGGGCCGGG-CCGG ATCGAGGCGCATCTC TERM 2516 2190104 - 2190088 - R 100 -10.8 -4.98531 | CGCCCAAACGAAAAA GGCGGG TATCC CCCGCC CGGCCAGGTGGTCCA Daud_2079 2191151 - 2190159 - | peptide chain release factor 2 Daud_2080 2194155 - 2191444 - | preprotein translocase, SecA subunit TERM 2517 2192295 - 2192271 - G 77 -14.3 -2.91695 | overlap 2192268 GGGACTTTGAAATCA GCGGATGCTCC AGG GGAGCATCCTC GTCCATCTTCAGCCG TERM 2518 2192470 - 2192517 + g 83 -4.6 -5.0538 | opp_overlap 2192475 2192476, overlap 2192475 TTCGGTACCGATGAT GAAAAGGCCGCCCAGCGCGACC ACCC GGTCGTGCTCGGCATCGGTCTC TTTTTTGAACTCGGC TERM 2519 2192512 - 2192475 - G 76 -7.5 -4.3129 | opp_overlap 2192470 2192475, overlap 2192476 TACCGATGATGAAAA GGCCGCCCAGCGCGACC ACCC GGTCGTGCTCGGCATCG GTCTCTTTTTTGAAC TERM 2520 2194006 - 2194022 + g 72 -7.9 -4.14511 | ACCGGCCTCCAGGCG CTCCCGC AAA GCAGGAG TTTTGGCCTGGAGTT TERM 2521 2194030 - 2194071 + g 71 -10.9 -3.51411 | gap 1, overlap 2194026 AGCAGGAGTTTTGGC CTGGAGTTCGGCATCCGTGA GTT TCTCG-ATGCGGGGCTCCAG TTCGTTTACGGCCGT TERM 2522 2194314 - 2194285 - R 80 -9.3 -4.13343 | gap 2, opp_overlap 2194311, overlap 2194288 ACAAATGCTGGAAAA CGAGCGGGGCCGG TGGTGT CCGGCCCCG--CG ACTCTGGCGCGTACT TERM 2523 2194313 - 2194288 - R 100 -19 -3.08776 | opp_overlap 2194311, overlap 2194285 AATGCTGGAAAACGA GCGGGGCCGG TGGTGT CCGGCCCCGC GACTCTGGCGCGTAC Daud_2081 2194871 - 2194347 - | sigma 54 modulation protein/ribosomal protein S30EA Daud_2082 2195732 - 2195088 - | phosphoribosyltransferase TERM 2524 2195676 - 2195664 - G 100 -6.9 -5.70829 | opp_overlap 2195667, overlap 2195665 AACAGGAGAAAAAAA CCGGC CGC ACCGG TCACAGTACGGCTGT TERM 2525 2195690 - 2195665 - G 73 -8.9 -4.00057 | opp_overlap 2195667, overlap 2195664 ACAGGAGAAAAAAAC CGGCCGCACCG GTCA CAGTACGGCTG TCCTGAAAGCCCCTC Daud_2083 2197527 - 2195821 - | diguanylate cyclase TERM 2526 2196321 - 2196340 + g 76 -5.6 -4.56597 | TGGGCAGGCCGGTGA GGTAGTCG CGCC CGGCCACC TTTTTCAACCGGCGG TERM 2527 2196704 - 2196687 - G 75 -3.4 -4.84359 | gap 1 CCACCGGCACAAAAA GGTGCCG CTCCT CGG-ACC AGAGATAGACCGCGG TERM 2528 2196926 - 2196908 - G 81 -7.3 -4.49311 | overlap 2196909 AGGAGCACCAGAAAA GCGCCGG TGAAC CCGGCGG AACGGTACAGGGCGG Daud_2084 2198871 - 2197684 - | methionine adenosyltransferase Daud_2085 2199378 - 2199013 - | hypothetical protein TERM 2529 2199401 - 2199429 + r 83 -13.1 -3.28041 | opp_overlap 2199398 CACCTCTCCAAATTT TTTGGCCGCCCTT GGA GAGGGCGGCCGCA TTAGTGCTTGCCGTT Daud_2086 2200051 - 2199458 - | BioY protein TERM 2530 2200266 - 2200282 + r 71 -8 -3.89704 | CGGCCCATCGGCGGT TTCCGG CACAA CCGGAA TTCTTCATTGTCTTA Daud_2087 2200538 - 2200287 - | PRC-barrel domain-containing protein Daud_2088 2202165 - 2200585 - | integral membrane protein MviN TERM 2531 2201545 - 2201519 - G 72 -7.9 -4.18018 | overlap 2201531 2201536 TGGCGCCAGTCAAAA CCCGGCCGG AAACGGAAG CCGGCCCGG TACAGGCTGGGCACC TERM 2532 2201578 - 2201531 - G 81 -14.1 -3.5394 | gap 1, overlap 2201519 2201536 AAACCCGGCCGGAAA CGGAAGCCGGCCCGGTACAGGC TGGGC ACCTGGACCAGGCCGGCCG-CG ACCATGCCCAGAACC TERM 2533 2201574 - 2201536 - G 95 -20.3 -3.27525 | overlap 2201519 2201531 CGGCCGGAAACGGAA GCCGGCCCGGTACAGGC TGGGC ACCTGGACCAGGCCGGC CGCGACCATGCCCAG Daud_2089 2203812 - 2202409 - | phosphomannomutase TERM 2534 2202498 - 2202532 + g 76 -9 -4.07568 | opp_overlap 2202492 TCCGGAAAACCGGTT CGGTGCCCGAGGCCCG GAT CAGGACCCAGGCGCCG TTTTCCAGCACCAGC TERM 2535 2203686 - 2203663 - G 70 -7.4 -4.03413 | overlap 2203683 ACGGTCGGAGAGAAA GCGGTTGTCG TACC CCACAACCAC CCCGCGCCCCGCAAG Daud_2090 2204625 - 2203888 - | hypothetical protein TERM 2536 2204978 - 2204939 - R 100 -14.2 -5.13473 | opp_overlap 2204940 2204942 2204943, overlap 2204942 2204943 AGGAGACTGAAAAAA GAACGGGCCGGGCTCCGT TTTG ACGGAACCCGGCCCCTGT TTTTTCGGTCGGAAC TERM 2537 2204940 - 2204977 + r 100 -15.5 -5.08824 | opp_overlap 2204939 2204942 2204943, overlap 2204942 2204943 GGAGACTGAAAAAAG AACGGGCCGGGCTCCGT TTTG ACGGAACCCGGCCCCTG TTTTTTCGGTCGGAA TERM 2538 2204975 - 2204942 - R 100 -20.3 -4.65666 | opp_overlap 2204940 2204942 2204943, overlap 2204939 2204943 AGACTGAAAAAAGAA CGGGCCGGGCTCCGT TTTG ACGGAACCCGGCCCC TGTTTTTTCGGTCGG TERM 2539 2204942 - 2204975 + r 100 -18.1 -4.17608 | opp_overlap 2204942 2204939 2204943, overlap 2204940 2204943 AGACTGAAAAAAGAA CGGGCCGGGCTCCGT TTTG ACGGAACCCGGCCCC TGTTTTTTCGGTCGG TERM 2540 2204943 - 2204974 + r 100 -21.6 -3.09842 | opp_overlap 2204942 2204939 2204943, overlap 2204942 2204940 GACTGAAAAAAGAAC GGGCCGGGCTCCGT TTTG ACGGAACCCGGCCC CTGTTTTTTCGGTCG TERM 2541 2204974 - 2204943 - R 100 -23.8 -3.37773 | opp_overlap 2204943 2204942 2204940, overlap 2204942 2204939 GACTGAAAAAAGAAC GGGCCGGGCTCCGT TTTG ACGGAACCCGGCCC CTGTTTTTTCGGTCG Daud_2091 2205854 - 2204994 - | UTP-glucose-1-phosphate uridylyltransferase GalU TERM 2542 2205532 - 2205501 - G 79 -11.4 -3.85698 | CTCGTCGCCCACAAA GGCCCGGGCGCACC CCAC GGCGTGCCCCAGCC CCAGGGGATGCCGCT Daud_2092 2207050 - 2205989 - | glycosyl transferase family protein TERM 2543 2206711 - 2206700 - G 72 -4.4 -4.56597 | CGGGTTGGTCAAAAA TTCC ACGT GGAA ACCGAAGGGGATCAG Daud_2093 2207707 - 2207195 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 2544 2207495 - 2207458 - G 71 -11.1 -3.44051 | CCTCCACGATCAGAA CGCCGGGCATGACCGGG TAGT CCGGGAAATGTCCGGCG AAAAACGGCTCGTTC Daud_2094 2209675 - 2207708 - | hypothetical protein TERM 2545 2208443 - 2208461 + g 81 -16 -2.73681 | opp_overlap 2208425, overlap 2208454 GACCGCCCCGGCCAG GGCCGCCA GCT TGGCGGCC TGGTTGACCTCCATG TERM 2546 2208811 - 2208787 - G 73 -6.4 -4.30844 | gap 1, overlap 2208774 2208788 ACCGCACCAGCAAAA CCCGCGCGTTG CGCT CAACG-GCGGC CAAGACGAAGCGGTC Daud_2095 2211033 - 2209798 - | cell envelope-related transcriptional attenuator TERM 2547 2210222 - 2210207 - G 76 -6.8 -4.4009 | CGGTAGTTCAGAAAA CCACCC GGCA GGGTAG CGGAAACTATTTTCA Daud_2096 2212237 - 2211071 - | polysaccharide pyruvyl transferase TERM 2548 2211638 - 2211627 - G 83 -7.2 -4.65895 | overlap 2211628 GGCCGGACCGAAAAA CCGG CCAC CCGG CCGTCCCGCACCCCG TERM 2549 2211848 - 2211820 - G 70 -7.9 -4.08216 | opp_overlap 2211819 2211820 GGACGCGGTTCAAAA CGGCGCGGGTCAG GAA CCGTCCCGTGCGG GTTTCAAGGGGACCG TERM 2550 2211905 - 2211886 - G 95 -12.8 -4.34402 | GCGCGTAGATGAAAA CCGGCCGC CCCA GCAGCCGG GCCAGCGCAATCAGG Daud_2097 2212583 - 2214403 + | hypothetical protein TERM 2551 2214443 - 2214417 - T 81 -12.4 -3.54755 | opp_overlap 2214424, overlap 2214424 AGGCCCCAAATAAGA GAAAAAAGGGGC CAG GCCCCTTTTTTA AGGCAGACACCTTTT TERM 2552 2214424 - 2214436 + T 100 -10.5 -5.00616 | opp_overlap 2214417 2214424 AAATAAGAGAAAAAA GGGGC CAG GCCCC TTTTTTAAGGCAGAC TERM 2553 2214436 - 2214424 - T 100 -10.5 -5.57729 | opp_overlap 2214424, overlap 2214417 AAATAAGAGAAAAAA GGGGC CAG GCCCC TTTTTTAAGGCAGAC Daud_2098 2215207 - 2214485 - | WecB/TagA/CpsF family glycosyl transferase Daud_2099 2218492 - 2215361 - | acriflavin resistance protein TERM 2554 2217129 - 2217113 - G 72 -8 -4.18494 | CACGGTCAGGGAAAA CGGTGT GAACA ACACCG AAGCCATGCCGCCCA TERM 2555 2217217 - 2217183 - G 81 -7.6 -4.44548 | overlap 2217185 GACATTGAAGTAAAA GAGGCGCCGAGGACCG CGC CGGTCACCTCCGCCGC CCCGGTCCGGGCGGC TERM 2556 2217215 - 2217185 - G 71 -8.8 -3.82321 | overlap 2217183 CATTGAAGTAAAAGA GGCGCCGAGGACCG CGC CGGTCACCTCCGCC GCCCCGGTCCGGGCG TERM 2557 2217960 - 2218009 + g 73 -11.4 -3.61774 | gap 3, overlap 2218005 ATCTCGCGCTCCCGT CCGC-CCTGCA-CGGCGACCGAGGC CAC GCC-CGGCAGCCGTTCCAGGCGCGG TTTCACCGTGTTCTC Daud_2100 2219628 - 2218489 - | RND family efflux transporter MFP subunit TERM 2558 2219287 - 2219327 + g 74 -14.6 -2.52543 | gap 1, opp_overlap 2219277 2219279 AAAAAGCCCCGACTC GGCCGCCGC-CACCCCGGC TTCG GCCTGGGTGAGCTGCGCCC TCAGTTCCACGGCGT Daud_2101 2220125 - 2219634 - | MarR family transcriptional regulator TERM 2559 2220309 - 2220297 - R 100 -10.5 -5.30575 | opp_overlap 2220297 2220298, overlap 2220290 2220298 GAAAAAGGGAAAAAA GGGGC CAG GCCCC TTTTTCGGTCACCCT TERM 2560 2220297 - 2220309 + r 95 -10.5 -4.66163 | opp_overlap 2220297 2220290 2220298, overlap 2220298 GAAAAAGGGAAAAAA GGGGC CAG GCCCC TTTTTCGGTCACCCT TERM 2561 2220298 - 2220356 + r 100 -17.7 -3.39216 | gap 2, opp_overlap 2220297 2220290 2220298 2220345, overlap 2220297 2220345 AAAAAGGGAAAAAAG GGGCCAGGCCCC-TTTTT-CGGTCACC CTTTTTC GGTCACGGTAAAAAAGGGGCCTGGCCC CTTTTTCGGTCAGCG TERM 2562 2220356 - 2220298 - R 100 -17.7 -3.75905 | gap 2, opp_overlap 2220297 2220298 2220345, overlap 2220297 2220290 2220345 AAAAAGGGAAAAAAG GGGCCAGGCCCC-TTTTT-CGGTCACC CTTTTTC GGTCACGGTAAAAAAGGGGCCTGGCCC CTTTTTCGGTCAGCG TERM 2563 2220345 - 2220357 + r 95 -10.5 -4.65895 | opp_overlap 2220298 2220345, overlap 2220298 GGTCACGGTAAAAAA GGGGC CTG GCCCC TTTTTCGGTCAGCGG TERM 2564 2220357 - 2220345 - R 100 -10.5 -5.0538 | opp_overlap 2220298 2220345, overlap 2220298 GGTCACGGTAAAAAA GGGGC CTG GCCCC TTTTTCGGTCAGCGG Daud_2102 2221319 - 2220366 - | protoheme IX farnesyltransferase TERM 2565 2221851 - 2221885 + G 82 -14.9 -3.34192 | GACATCCGCAACTGG CGCGGGGAGCCGCCC ACCCG GGGCAGCTTCGCGCG TTGGTTCGCCGCGTT TERM 2566 2223177 - 2223141 - g 91 -9.4 -4.44667 | gap 1, overlap 2223143 GCCGCCAACAACAAA TCCCCC-GCCGCCCTCG GCCC CGAGGACATCCGGGAGA TTCAAAACCAGCTCA Daud_2103 2221470 - 2223221 + | hypothetical protein TERM 2567 2223897 - 2223875 - g 78 -4.6 -4.72986 | opp_overlap 2223877, overlap 2223877 GATCCCGACGAAAAA CTGCCCCCGG AAG CCCGGCGCTG CCTTGAGGAATTCCG Daud_2104 2223662 - 2223949 + | helix-turn-helix domain-containing protein Daud_2105 2224926 - 2224036 - | polysaccharide deacetylase TERM 2568 2224107 - 2224081 - G 74 -9.3 -3.86015 | overlap 2224082 GAGGGCGTTCAGAAA CTGGTCGGCGG TGGTG CCGCCGTCCAC CCGGTAAATAAGGTG TERM 2569 2224106 - 2224082 - G 70 -12.8 -2.91395 | overlap 2224081 AGGGCGTTCAGAAAC TGGTCGGCGG TGGTG CCGCCGTCCA CCCGGTAAATAAGGT TERM 2570 2225095 - 2225055 - R 83 -11.8 -3.74077 | gap 1, opp_overlap 2225049 2225090, overlap 2225057 2225059 2225062 GCGCAGACAGGCAAA CAGACGAGGCCCCCTCTCC AACC GGGGAGGGGGCC-CGCTTA AGGCGCTTTCGGCCC TERM 2571 2225092 - 2225057 - R 88 -13.3 -3.45231 | gap 2, opp_overlap 2225049 2225090, overlap 2225055 2225059 2225062 GCAGACAGGCAAACA GACGAGGCCCCCTCTCC AACC GGGGAGGGGGCC-CG-C TTAAGGCGCTTTCGG TERM 2572 2225091 - 2225059 - R 100 -17 -3.29268 | gap 1, opp_overlap 2225049 2225090, overlap 2225057 2225055 2225062 AGACAGGCAAACAGA CGAGGCCCCCTCTCC AACC GGGGAGGGGGCC-CG CTTAAGGCGCTTTCG TERM 2573 2225089 - 2225062 - R 95 -18.4 -2.81535 | opp_overlap 2225049, overlap 2225059 2225057 2225055 CAGGCAAACAGACGA GGCCCCCTCTCC AACC GGGGAGGGGGCC CGCTTAAGGCGCTTT Daud_2106 2225575 - 2225117 - | PilT domain-containing protein Daud_2107 2225808 - 2225566 - | AbrB family transcriptional regulator TERM 2574 2228575 - 2228612 + G 76 -15.5 -2.52464 | gap 1, opp_overlap 2228545 2228544 2228572 GCCGACATCGAACTG CTGGCGGCCCGCGGCCTG GTC CAGGGC-CGGGCGGCCGG TAAGTTCGCCCCCGG Daud_2108 2226316 - 2229303 + | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 2575 2229338 - 2229361 + T 100 -19.6 -5.06816 | opp_overlap 2229338 AGTCAGTCGTTAAAA GCCCCCGGTG TAAA CACCGGGGGC TTTTTGTTACCGCAT TERM 2576 2229361 - 2229338 - T 100 -19.6 -4.09864 | opp_overlap 2229338 AGTCAGTCGTTAAAA GCCCCCGGTG TAAA CACCGGGGGC TTTTTGTTACCGCAT TERM 2577 2229992 - 2229982 - T 73 -5.4 -4.64598 | opp_overlap 2229982 CAAGCAGCCGAAAAA GCTT TAA AAGC GTTCCTTATTTTGAA Daud_2111 2230794 - 2230213 - | hypothetical protein Daud_2112 2231114 - 2230800 - | hypothetical protein TERM 2578 2231500 - 2231460 - g 86 -8.3 -4.56597 | overlap 2231494 TTGCGCCTCGAAAAA GCCGCCATTTCCCCG CTGGTCAGATT CCGGGAAATGGCCGC CGAGACCGAGCGGCG Daud_2113 2231322 - 2231585 + | AbrB family transcriptional regulator Daud_2114 2231564 - 2231980 + | PilT domain-containing protein Daud_2115 2232301 - 2232053 - | hypothetical protein TERM 2579 2232097 - 2232114 + g 76 -7.7 -4.29396 | gap 1, opp_overlap 2232097, overlap 2232098 CGATCGGCTTACATA C-GGGCAG TGG CTGCCCTG TTTTCCTAGCTGCTT TERM 2580 2232098 - 2232112 + g 76 -11.4 -3.745 | opp_overlap 2232097, overlap 2232097 GATCGGCTTACATAC GGGCAG TGG CTGCCC TGTTTTCCTAGCTGC Daud_2116 2234845 - 2232599 - | S-layer domain-containing protein TERM 2581 2232802 - 2232815 + g 74 -2.3 -4.9218 | CCCGGACGATCTCGC CTTCC ACCC GGATG TTTTTGTCCTCGGTC TERM 2582 2235047 - 2234990 - R 73 -5.6 -4.64334 | opp_overlap 2235004 2235005 2235025, overlap 2235005 AATTTGCCAAGAAAA GT-CGGCGCGAGAAAACCAAGCCCCCTC TTAA AAGGGGGCCCGGCTCT-TTGCATCGGAC GAATTTTGAAGTTTT TERM 2583 2235032 - 2235005 - R 100 -13.4 -4.36914 | opp_overlap 2235005 2235004 2235025, overlap 2234990 GTCGGCGCGAGAAAA CCAAGCCCCCTC TTAA AAGGGGGCCCGG CTCTTTGCATCGGAC Daud_2117 2235468 - 2235115 - | hypothetical protein TERM 2584 2235388 - 2235363 - G 100 -5.3 -5.76949 | opp_overlap 2235363 2235367, overlap 2235367 TACCGTCAAAAAAAA TAAGCCGCGCC TTGA GGCGCCGTCTA TTTCCCTCACGCTCG Daud_2118 2235775 - 2235455 - | hypothetical protein TERM 2585 2236065 - 2236033 - R 100 -8.3 -5.26875 | opp_overlap 2236032 2236025, overlap 2236034 2236035 CCCGGAAGGAAAAAA TTGAACCCGGTACCC ACC GAGTGCCGGGTTCGG GTGATTGCTTGATTT TERM 2586 2236064 - 2236034 - R 83 -11.8 -3.75402 | opp_overlap 2236032 2236025, overlap 2236033 2236035 CCGGAAGGAAAAAAT TGAACCCGGTACCC ACC GAGTGCCGGGTTCG GGTGATTGCTTGATT TERM 2587 2236063 - 2236035 - R 83 -15.3 -2.84518 | opp_overlap 2236032 2236025, overlap 2236034 2236033 CGGAAGGAAAAAATT GAACCCGGTACCC ACC GAGTGCCGGGTTC GGGTGATTGCTTGAT Daud_2119 2237377 - 2236088 - | copper amine oxidase domain-containing protein TERM 2588 2236667 - 2236656 - G 72 -7.2 -4.13767 | opp_overlap 2236655 GCCTCCACCCGAAAA GCGG TCCG CCGC GTGCTCTCCCGCTCG TERM 2589 2237482 - 2237450 - R 95 -11.9 -4.46926 | opp_overlap 2237454, overlap 2237453 CACCTGAGGACAAAA CAGCCAGCCGCAGGA CCA CCCTGCGGCCGTTTG CTGAACAAATCGCCT TERM 2590 2237479 - 2237453 - R 75 -12.2 -2.90028 | opp_overlap 2237454, overlap 2237450 CTGAGGACAAAACAG CCAGCCGCAGGA CCA CCCTGCGGCCGT TTGCTGAACAAATCG TERM 2591 2237454 - 2237478 + r 86 -12.8 -3.72893 | opp_overlap 2237453 2237450 TGAGGACAAAACAGC CAGCCGCAGG ACCAC CCTGCGGCCG TTTGCTGAACAAATC Daud_2120 2238627 - 2237503 - | outer membrane protein-like protein TERM 2592 2238727 - 2238783 + r 100 -17.1 -3.83771 | opp_overlap 2238737 2238738, overlap 2238733 2238737 TTTGGCCGCAATTCC GCCCAGGAAAGCCGACCCCGGCCCGCT TTT AGGGGGCCGGGGTCGGACTGCTTATGC TTTGCTGAGTTTGTT TERM 2593 2238733 - 2238777 + r 100 -19.9 -3.62849 | opp_overlap 2238737 2238738, overlap 2238727 2238737 CGCAATTCCGCCCAG GAAAGCCGACCCCGGCCCGCT TTT AGGGGGCCGGGGTCGGACTGC TTATGCTTTGCTGAG TERM 2594 2238737 - 2238774 + r 100 -23.5 -2.92546 | gap 1, opp_overlap 2238737 2238738, overlap 2238733 2238727 ATTCCGCCCAGGAAA G-CCGACCCCGGCCCGCT TTT AGGGGGCCGGGGTCGGAC TGCTTATGCTTTGCT TERM 2595 2238773 - 2238737 - R 100 -23.7 -3.72695 | opp_overlap 2238737 2238733 2238727, overlap 2238738 ATTCCGCCCAGGAAA GCCGACCCCGGCCCGCT TTT AGGGGGCCGGGGTCGGA CTGCTTATGCTTTGC TERM 2596 2238772 - 2238738 - R 100 -27.2 -2.83403 | opp_overlap 2238737 2238733 2238727, overlap 2238737 TTCCGCCCAGGAAAG CCGACCCCGGCCCGCT TTT AGGGGGCCGGGGTCGG ACTGCTTATGCTTTG Daud_2121 2240918 - 2238804 - | copper amine oxidase domain-containing protein TERM 2597 2241081 - 2241059 - H 75 -12 -2.91144 | overlap 2241056 TGACCCGCTAAAGTA GGCACCCAGT GCC ACCGGGTACC CCGCGGCGCGGGGCC TERM 2598 2241462 - 2241448 - H 77 -3.5 -5.055 | gap 1, overlap 2241450 2241451 CCAACTGGGAAAAAA CAGCGG CCGG CCGC-G CCCGAGAATATCTTC TERM 2599 2241461 - 2241450 - H 74 -7.2 -4.15235 | overlap 2241448 2241451 AACTGGGAAAAAACA GCGG CCGG CCGC GCCCGAGAATATCTT Daud_2122 2241876 - 2242304 + | PilT domain-containing protein TERM 2600 2242476 - 2242463 - g 75 -3.8 -4.72272 | CGGGGGGATCAAAAA CCAG AGTGAA CTGG TGCGTCGCGCCTTAA Daud_2123 2242341 - 2242649 + | CopG family transcriptional regulator Daud_2124 2242642 - 2243034 + | transcriptional modulator of MazE/toxin, MazF Daud_2125 2243196 - 2243813 + | ECF subfamily RNA polymerase sigma-24 factor Daud_2126 2243810 - 2244880 + | putative transmembrane anti-sigma factor TERM 2601 2244900 - 2244918 + F 100 -11.7 -5.33405 | opp_overlap 2244894 2244903 AAGGAGAAATTCGAA GGAGCCC CGAAC GGGCTCC TTTTTGTTTGCTGCA Daud_2127 2245112 - 2245384 + | AbrB family transcriptional regulator Daud_2128 2245372 - 2245770 + | PilT domain-containing protein TERM 2602 2246049 - 2246065 + T 100 -7.2 -5.85244 | overlap 2246054 CCATCATGCCCGGGA GGGCCC GAAAG GGGCTC TTTTTTGTTTTGCTT Daud_2129 2250066 - 2246080 - | peptidase S8 and S53, subtilisin, kexin, sedolisin TERM 2603 2246488 - 2246440 - G 73 -10.8 -3.53811 | gap 1, opp_overlap 2246441 GGCATCGTCGGCAAA GCCGGGGGCGGCGCCCGGTCTGG TGGG CCAGCCCAGGAGGCGCACC-AGC ACGGCGCTGAACTCG TERM 2604 2246979 - 2246995 + g 72 -4.3 -4.56597 | overlap 2246970 GGCGCAGGCTCTCGG CGGTGAC CGG GTAGCCG TTTTTGAGCACCGCG TERM 2605 2248161 - 2248204 + g 81 -13.1 -3.75153 | gap 2 GGTTTTTCGCCCCGG CGCGCGGGAGTTCGACCCGGC CGCC GCCG-G-CGGTCTCCAGCGCG TTTCCGTTCGCGCCA TERM 2606 2250026 - 2250000 - G 74 -2.2 -4.91109 | overlap 2250001 2250013 GCGCGAGCAGAAAAA CCGTAATCAGCA ACG CACTGAGCACGA CAAGCGCGCCGAGCA TERM 2607 2250067 - 2250077 + r 78 -2.4 -5.27335 | CCTTTGCTTTTGCAT GCGG CCT CCAC TTTTTATTTAAGGAA Daud_2130 2250745 - 2250293 - | PilT domain-containing protein Daud_2131 2251046 - 2250738 - | prevent-host-death family protein TERM 2608 2251130 - 2251151 + r 71 -10.1 -3.5882 | opp_overlap 2251130 AGTGAAAGATTAAAA CCCCGGG TTAGAAGT CCCGGGG TTTGCAGATGATCTC TERM 2609 2251151 - 2251130 - R 88 -10.1 -4.50358 | opp_overlap 2251130 AGTGAAAGATTAAAA CCCCGGG TTAGAAGT CCCGGGG TTTGCAGATGATCTC Daud_2132 2251682 - 2251137 - | hypothetical protein TERM 2610 2251721 - 2251733 + r 80 -9.1 -4.10657 | opp_overlap 2251721 GATTCGGGCGGGAAA GGGGT CAG ACCCC TTTTCCCGCATGTCA TERM 2611 2251776 - 2251766 - R 82 -5.4 -5.00616 | opp_overlap 2251766 CGGTCCCTGAAAAAA GTGT CAG ACAC CTCTTTGGGCACCTT Daud_2133 2252832 - 2251801 - | cell shape determining protein MreB TERM 2612 2252950 - 2252919 - R 78 -13.6 -2.64155 | gap 1, overlap 2252916 2252915 GCGGGGGGAAATCCA CACCCAGGCGCGCCG GGA CGGCGCGCC-GCGAG CTACCGGATGCAAAA Daud_2134 2253294 - 2253043 - | regulatory protein, DeoR TERM 2613 2253396 - 2253374 - R 100 -7 -5.49579 | CCACAAAAAAGAAAA TGGCCCCTTA AAA CAAGAAGCCA TCAAGGTTTAGGGTC TERM 2614 2253458 - 2253446 - R 100 -10.5 -4.75174 | opp_overlap 2253446 CAGGGAAGGTAAAAA GGGGC CAG GCCCC TTTTTTAGTAGGGTT TERM 2615 2253446 - 2253458 + r 100 -10.5 -5.16237 | opp_overlap 2253446 CAGGGAAGGTAAAAA GGGGC CAG GCCCC TTTTTTAGTAGGGTT Daud_2135 2254431 - 2253463 - | SpoIID/LytB domain-containing protein TERM 2616 2254105 - 2254130 + g 71 -12.5 -3.01712 | CTGGCGCGGGTCGTC GCTCGCGTCCG CACC CGGGTGCGGGC TGTTCGCCACGCCGC TERM 2617 2254553 - 2254528 - R 100 -17.7 -4.66609 | opp_overlap 2254528 CAGGGCATGGAAAAA GACCGAGGTGA TGAG TCACCTCGGTC TTTTTTCGAAGCCTG TERM 2618 2254528 - 2254553 + r 100 -17.7 -5.0133 | opp_overlap 2254528 CAGGGCATGGAAAAA GACCGAGGTGA TGAG TCACCTCGGTC TTTTTTCGAAGCCTG Daud_2136 2254999 - 2254586 - | ATP synthase F1, epsilon subunit Daud_2137 2256475 - 2255057 - | ATP synthase F1, beta subunit Daud_2138 2257390 - 2256503 - | ATP synthase F1, gamma subunit Daud_2139 2258936 - 2257413 - | ATP synthase F1, alpha subunit TERM 2619 2258530 - 2258542 + g 83 -4.7 -5.08824 | opp_overlap 2258528 2258531, overlap 2258526 2258531 GGGGACCGGAAGACC ACGCC GTG GGCGA TTTTTTCAATGGGAC Daud_2140 2259500 - 2258952 - | ATP synthase F1, delta subunit Daud_2141 2259988 - 2259497 - | ATP synthase F0, B subunit TERM 2620 2259803 - 2259826 + g 100 -9.5 -4.93365 | overlap 2259822 ATCGGCCTCCAGCTG GCTGCGGAG TTCGGC CGCCGCAGC TTTTTGCTTCTCGGC Daud_2142 2260336 - 2260106 - | ATP synthase F0, C subunit Daud_2143 2261205 - 2260432 - | ATP synthase F0, A subunit Daud_2144 2261631 - 2261230 - | hypothetical protein TERM 2621 2261569 - 2261548 - G 78 -6.5 -4.56597 | CTGCCGGTCGAAAAA GACCGCGAC CAGA GCCACGATC AAAAGCACCAGGGTT Daud_2145 2261943 - 2261644 - | hypothetical protein Daud_2146 2263355 - 2262072 - | UDP-N-acetylglucosamine 2-epimerase TERM 2622 2262549 - 2262579 + g 70 -8 -4.08216 | GATCCGCCGCAGGGC CCGGTACACCCCGC GCA GCGGGGCGCCCAGG TTTTCGCGGCGGTGG TERM 2623 2263130 - 2263082 - G 76 -8.9 -4.11216 | gap 1, overlap 2263114 2263127 CGGTGACGTCGAAAA GGGACTGGCCGGGGCGCATGAT GTCCAG ATCATGCGCCG-GGACAATGCC GAACAGGTCGAGCAC TERM 2624 2263324 - 2263312 - G 95 -10.5 -4.57073 | opp_overlap 2263306 2263306 2263312 2263313, overlap 2263313 CACCTCCTCGAAAAA GGGGC CAG GCCCC TTTTTACCTTTTGAC TERM 2625 2263312 - 2263324 + g 100 -10.5 -4.87318 | opp_overlap 2263312 2263313, overlap 2263306 2263306 2263313 CACCTCCTCGAAAAA GGGGC CAG GCCCC TTTTTACCTTTTGAC TERM 2626 2263313 - 2263370 + g 73 -11.4 -3.62746 | gap 2, opp_overlap 2263312 2263313 2263359, overlap 2263312 2263306 2263306 2263359 ACCTCCTCGAAAAAG GGGCCAGGCCCCTTTTT--ACCTTTTGA CTTT TCCCGGGGCCCAAAAAGGGGCCTGGCCC CTTTTTTGCGCTACA TERM 2627 2263359 - 2263371 + r 100 -10.5 -5.0538 | opp_overlap 2263313 2263359, overlap 2263313 CCCGGGGCCCAAAAA GGGGC CTG GCCCC TTTTTTGCGCTACAG TERM 2628 2263371 - 2263359 - R 95 -10.5 -4.56597 | opp_overlap 2263313 2263359, overlap 2263313 CCCGGGGCCCAAAAA GGGGC CTG GCCCC TTTTTTGCGCTACAG Daud_2147 2264628 - 2263381 - | glycine hydroxymethyltransferase TERM 2629 2263701 - 2263756 + g 78 -6.7 -4.6526 | opp_overlap 2263721 GGTGGGTGTCGGTGC CGCCCGC-CACCAGCTCAAAACCCCGC TCCT GCAGGGCTT-GGGCTAAGGCGCGGGCG TTTTTCACGATTTGT TERM 2630 2263736 - 2263721 - G 76 -8.2 -4.15565 | opp_overlap 2263701 GCCACCAGCTCAAAA CCCCGC TCCT GCAGGG CTTGGGCTAAGGCGC TERM 2631 2263922 - 2263940 + g 81 -7.3 -4.43844 | opp_overlap 2263914 CACAGGATCATCCCG CCCCGCG GGCCG CGCAGGG TTTTGTGGGTCGTGG Daud_2148 2265088 - 2264630 - | RpiB/LacA/LacB family sugar-phosphate isomerase TERM 2632 2264850 - 2264823 - G 70 -9.8 -3.62046 | gap 1, opp_overlap 2264840 TGACGGGCCGAATAA GGGTCGTGGGCGA CCG CCGCCCG-GACCC CCGGCACTTTGTTGG Daud_2149 2265689 - 2265216 - | protein tyrosine phosphatase Daud_2150 2266258 - 2265716 - | hypothetical protein Daud_2151 2267331 - 2266255 - | Sua5/YciO/YrdC/YwlC family protein TERM 2633 2267371 - 2267396 + r 79 -11.3 -3.70076 | gap 1, opp_overlap 2267377, overlap 2267371 2267377 CCACATATCCAACCC G-AAAAAGGGGC CAG GCCCCTTTTTAC TTTCCCTGACTTTCC TERM 2634 2267389 - 2267377 - R 95 -10.5 -4.67234 | opp_overlap 2267371 2267371 2267377 ATCCAACCCGAAAAA GGGGC CAG GCCCC TTTTTACTTTCCCTG TERM 2635 2267377 - 2267389 + r 100 -10.5 -5.00138 | opp_overlap 2267377, overlap 2267371 2267371 ATCCAACCCGAAAAA GGGGC CAG GCCCC TTTTTACTTTCCCTG Daud_2152 2268323 - 2267460 - | HemK family modification methylase Daud_2153 2269020 - 2268355 - | hypothetical protein TERM 2636 2269179 - 2269191 + r 100 -10.5 -5.00884 | opp_overlap 2269173 2269179 2269181, overlap 2269181 CTCGAATCAGAAAAA GGGGC CTG GCCCC TTTTTTCGGGAAAGT TERM 2637 2269191 - 2269179 - R 100 -10.5 -4.98255 | opp_overlap 2269179 2269181, overlap 2269173 2269181 CTCGAATCAGAAAAA GGGGC CTG GCCCC TTTTTTCGGGAAAGT TERM 2638 2269241 - 2269215 - R 83 -12.4 -3.70076 | opp_overlap 2269181 2269222, overlap 2269181 2269216 2269222 GGAAAGTCAGGGAAA GTAAAAAGGGGC CTG GCCCCTTTTTAG TCGAGGGTTTTGAGT TERM 2639 2269240 - 2269216 - R 86 -15.9 -2.81564 | opp_overlap 2269181 2269222, overlap 2269181 2269215 2269222 GAAAGTCAGGGAAAG TAAAAAGGGGC CTG GCCCCTTTTTA GTCGAGGGTTTTGAG TERM 2640 2269222 - 2269234 + r 100 -10.5 -4.7254 | opp_overlap 2269181 2269216 2269215 2269222, overlap 2269181 CAGGGAAAGTAAAAA GGGGC CTG GCCCC TTTTTAGTCGAGGGT TERM 2641 2269234 - 2269222 - R 100 -10.5 -5.00138 | opp_overlap 2269181 2269222, overlap 2269181 2269216 2269215 CAGGGAAAGTAAAAA GGGGC CTG GCCCC TTTTTAGTCGAGGGT Daud_2154 2270305 - 2269238 - | peptide chain release factor 1 TERM 2642 2269556 - 2269593 + gr 72 -11.9 -2.73994 | gap 1, overlap 2269552 GCAGCTGACCACGAT CCCGCTCGGCAG-GTGGG TGA CCCGCACCGCCGACTGGG TGGTGTTCACCGACT TERM 2643 2269947 - 2269933 - GR 70 -7 -4.07568 | overlap 2269934 GGTCCCCCGCGAAAA GGGCGG CCT CCTCCC CGCCGGTGCCGGCCC Daud_2155 2271182 - 2270256 - | hypothetical protein TERM 2644 2270899 - 2270921 + gr 71 -7.7 -3.99324 | overlap 2270900 AGCCCGATGGTAAGC GCCATCTCC AGGGG GGAGATGGG TTTCTCCTCCTCGCC TERM 2645 2270900 - 2270920 + gr 71 -11.2 -2.99273 | overlap 2270899 GCCCGATGGTAAGCG CCATCTCC AGGGG GGAGATGG GTTTCTCCTCCTCGC TERM 2646 2271071 - 2271034 - GR 71 -4.6 -4.4009 | overlap 2271036 GGCCACTTCAGAAAA GGGTACCGGGTGGTGA TCGTTT CCACCGCCCGGGTCTC CACCTCCACCGTATT TERM 2647 2271228 - 2271208 - R 86 -14.1 -2.90075 | opp_overlap 2271210, overlap 2271210 TTCCCGTCAAGCAGA TAGCAGAGC TTC GCTCTGCTA TTCCGGCCCTGAAAT TERM 2648 2271210 - 2271226 + r 76 -12.3 -3.02511 | opp_overlap 2271208 2271210 CCCGTCAAGCAGATA GCAGAGC TTC GCTCTGC TATTCCGGCCCTGAA TERM 2649 2271226 - 2271210 - R 75 -12.3 -3.00298 | opp_overlap 2271210, overlap 2271208 CCCGTCAAGCAGATA GCAGAGC TTC GCTCTGC TATTCCGGCCCTGAA Daud_2156 2271460 - 2271257 - | ribosomal protein L31 TERM 2650 2271599 - 2271583 - R 71 -4.4 -4.56775 | gap 1 ACCCCGCCCGAAAAA GGCTGGT GCCT ACC-GCC CCCCCCGGCTGGGAA Daud_2157 2272193 - 2271645 - | Rieske (2Fe-2S) domain-containing protein TERM 2651 2271913 - 2271895 - G 76 -5.8 -4.60797 | overlap 2271890 CCCCGATACACAAAA CCGACCGC TTT GCCGACGG GCAGGCTCCCGTGGG TERM 2652 2272206 - 2272216 + r 81 -2.4 -5.36441 | CACGTTCGACCTTCC CCCC GGT GCGG TTTTTTCTGTGGAAG TERM 2653 2272385 - 2272372 - R 77 -8.1 -4.08948 | GAAGCGCAGAAAGAA CGGTG GACG CACCG GATAACGAAGCTACA Daud_2158 2274165 - 2272396 - | NADH dehydrogenase (quinone) TERM 2654 2272679 - 2272621 - G 75 -12.3 -3.63515 | gap 2, opp_overlap 2272667 2272668 GGCGATCCGGAAGAA GGC-CGCGCCCCA-GCCCTCCACGGTGCC CTT GACCCCGCGCAGGCCGTCGAGCGCGCGCC CAAGCAGGGCGGCGG TERM 2655 2273861 - 2273818 - G 82 -5.8 -4.91109 | gap 1, overlap 2273820 TTCCCAGCAGAAAAA CAGGGTCAGCCAGTCGCCGGC GAA GACCACGCCTAGC-GACCCGG CCGCATACAAAAGCG Daud_2159 2274398 - 2274174 - | hypothetical protein Daud_2160 2276064 - 2274400 - | NADH dehydrogenase (quinone) Daud_2161 2277570 - 2276065 - | NADH dehydrogenase (quinone) TERM 2656 2276560 - 2276533 - G 88 -7.7 -4.8622 | gap 1 CCCGGCAATGAAAAA GAGCC-CGCCCT TCACG AGCGCGTGGCTC AGGACGTGTAGGAGC Daud_2162 2277959 - 2277567 - | NADH-ubiquinone oxidoreductase, chain 4L Daud_2163 2278394 - 2277963 - | Na+/H+ antiporter MnhB subunit-related protein Daud_2164 2278747 - 2278454 - | putative multicomponent Na+-H+ antiporter subunit A Daud_2165 2278983 - 2278744 - | putative multicomponent Na+:H+ antiporter subunit B Daud_2166 2279291 - 2278983 - | monovalent cation/proton antiporter, MnhG/PhaG subunit TERM 2657 2279176 - 2279156 - G 75 -3.1 -4.82901 | overlap 2279160 GCCCGGCGATAAAAA GCAGCAGCC CCA GGGTGTCGC ACTTGCCCACGGCAT TERM 2658 2279276 - 2279256 - G 72 -2.3 -4.78107 | overlap 2279257 CAGCAGCAGGAAAAA TCCGGCCAG CAT CAGGGCGGC GGCCAAGAAAGTCAT Daud_2167 2279572 - 2279288 - | multiple resistance and pH regulation protein F Daud_2168 2280184 - 2279576 - | cation antiporter TERM 2659 2279974 - 2279927 - G 76 -6.1 -4.62783 | gap 1, overlap 2279965 GAGCCAGGGCAAAAA GGC-CAGCAGCCGCAGCCAGGG CAAAC CCCAGACCGAAACCGCCGCGCC GCCGGCACTATCCCG Daud_2169 2280753 - 2280451 - | hypothetical protein TERM 2660 2280703 - 2280736 + g 91 -17.3 -3.34398 | opp_overlap 2280700 2280701, overlap 2280701 2280705 2280706 CCAGCTTCTAAAGGT GTTGCCGGGCGGGCC GGCC GGCCCGCCCGGGGTC TGTTTCAACCCAGAC TERM 2661 2280705 - 2280734 + g 91 -18.5 -3.24232 | opp_overlap 2280700 2280701, overlap 2280703 2280701 2280706 AGCTTCTAAAGGTGT TGCCGGGCGGGCC GGCC GGCCCGCCCGGGG TCTGTTTCAACCCAG TERM 2662 2280706 - 2280733 + g 90 -19.8 -2.54325 | opp_overlap 2280700 2280701, overlap 2280705 2280703 2280701 GCTTCTAAAGGTGTT GCCGGGCGGGCC GGCC GGCCCGCCCGGG GTCTGTTTCAACCCA Daud_2170 2282563 - 2280782 - | hypothetical protein TERM 2663 2282154 - 2282166 + g 74 -4.7 -4.56775 | TTCTCGTACTTCTCA GCGGC AGC GGCGC TTTTTGCGGCCGCCT Daud_2171 2284235 - 2282952 - | radical SAM domain-containing protein TERM 2664 2283788 - 2283819 + g 70 -10.2 -3.54475 | gap 1, overlap 2283792 GGAATTGACGGCGCT TGGCCTTGATCCTGC GGG GCAGGGTC-AGGTCG TTGTATAGTAACGGG TERM 2665 2283792 - 2283816 + g 70 -12.9 -2.9062 | overlap 2283788 TTGACGGCGCTTGGC CTTGATCCTGC GGG GCAGGGTCAGG TCGTTGTATAGTAAC TERM 2666 2284282 - 2284270 - R 95 -10.5 -4.56597 | opp_overlap 2284270 CCCGTTTTGCAAAAA GGGGC CTG GCCCC TTTTTTAGATCTCGT TERM 2667 2284270 - 2284282 + r 100 -10.5 -5.13473 | opp_overlap 2284270 CCCGTTTTGCAAAAA GGGGC CTG GCCCC TTTTTTAGATCTCGT Daud_2172 2285141 - 2284287 - | peptidase M23B Daud_2173 2286708 - 2285230 - | transcription termination factor Rho TERM 2668 2285273 - 2285290 + g 72 -14.1 -2.71364 | ATCATCCACCCTTCC GGCGGCC CGCC GGCCGCC TGCTTGAAGGCCTGG Daud_2174 2287534 - 2286887 - | putative transaldolase TERM 2669 2287220 - 2287210 - G 77 -2.4 -5.00616 | opp_overlap 2287210 GGTTGGCGGAAAAAA CGAG GGT CACG TTGGTCCGGATGCCC Daud_2175 2288457 - 2287591 - | fructose-1,6-bisphosphate aldolase, class II TERM 2670 2288068 - 2288119 + g 80 -4.8 -4.82901 | opp_overlap 2288075 CAGTTCCGCCTCCAC CGATACATCCACCGGCCGGGCGGT TTCC ACCACCCGGCGGGTCAAGGCGACG TTTTTGTCAAACGGC TERM 2671 2288112 - 2288075 - G 74 -14.1 -2.91264 | opp_overlap 2288068 GCCTCCACCGATACA TCCACCGGCCGGGCGGT TTCC ACCACCCGGCGGGTCAA GGCGACGTTTTTGTC Daud_2176 2289141 - 2288479 - | hypothetical protein Daud_2177 2289583 - 2289221 - | response regulator receiver protein Daud_2178 2290365 - 2289709 - | hypothetical protein Daud_2179 2291447 - 2290548 - | signal peptide peptidase SppA, 36K type TERM 2672 2290650 - 2290638 - G 70 -10.5 -3.64283 | overlap 2290627 GAAATCGCGGAAGAA GGGCC GCC GGCCC AGTTCCACCACCGGG Daud_2180 2293191 - 2291569 - | CTP synthase TERM 2673 2292077 - 2292061 - G 72 -2.1 -4.72846 | overlap 2292063 GCAGATACCCAAAAA GGGCAAG GAG CGTTCCC GCGCGTGGCGGATGG TERM 2674 2292841 - 2292876 + g 78 -11.8 -3.81027 | CTCATTGGTGATGTG GGGGATGACCTGGACG GTCC CGCCCAGGTAGTCTCC TTTCCGTTCCTTGCG Daud_2181 2295010 - 2293319 - | arginyl-tRNA synthetase TERM 2675 2293797 - 2293778 - G 74 -5.7 -4.45201 | gap 1, overlap 2293779 GGTCACAAAAAAATA TCGGGCCG CGTCC CGGC-CGA CCTCCTCCAGGAGTT TERM 2676 2294565 - 2294533 - G 95 -11.2 -4.64846 | CCACAAACGATAAAA GGGCAGCGATGCTG TCCCC CAGCGCCGCTCCCC TGGCGTTGCCCATAT TERM 2677 2294885 - 2294862 - G 73 -8.1 -4.07687 | AGGTTGGTGGCAAAA TCCCCGTGA TTTTTC TCCCGGGGA ACCTCTACCGTGAAT Daud_2182 2296529 - 2295312 - | aminotransferase, class I and II TERM 2678 2295847 - 2295835 - G 76 -5.5 -4.58685 | overlap 2295836 AAAGCCTTGGAAAAA CCCTG GAG CAGGA TCGTCCGGTCGCGCA Daud_2183 2297026 - 2296538 - | AsnC family transcriptional regulator TERM 2679 2296646 - 2296684 + g 76 -11.1 -3.78775 | gap 1, overlap 2296625 2296650 2296661 GCCGGTCACGCCGTC GAGCGGGGCCAACTTGGT GGCC ACGAAGTTGGCCAC-CTC TTTCATGGTCCGCCC TERM 2680 2296661 - 2296682 + g 74 -11.6 -3.48024 | overlap 2296650 2296646 GAGCGGGGCCAACTT GGTGGCCA CGAAGT TGGCCACC TCTTTCATGGTCCGC TERM 2681 2297100 - 2297068 - H 100 -14.1 -3.84451 | overlap 2297091 TCTCGGAAATGTAAA GGCGCCCTCCCCCCT CTT AAGGACGAGAGCGCC GATCTCGCGGTACCA Daud_2184 2297680 - 2298795 + | DNA methylase N-4/N-6 domain-containing protein Daud_2185 2300197 - 2298824 - | putative spore germination protein TERM 2682 2299503 - 2299516 + g 78 -5.2 -4.75372 | overlap 2299480 2299480 TCAACCACGGCCAGC GCCC TTTCCC GGGC TTTTTCCTCCGTAGT TERM 2683 2300081 - 2300069 - G 78 -3.3 -5.0133 | overlap 2300073 CACCGTGTCAAAAAA GGACC GCT GGTAC TCGGCGTTGAGCAGG TERM 2684 2300159 - 2300132 - G 75 -11.9 -3.55563 | ACTCCACTGTTCAAA GGCCCAGGCGG AGACCA CCGCCAGGACC GCCAGAGACACGAGC Daud_2186 2300810 - 2300238 - | cell wall hydrolase, SleB TERM 2685 2300350 - 2300330 - G 76 -6.1 -4.56367 | opp_overlap 2300344, overlap 2300332 2300334 GATTCCAGAAATAAA GGGACCC GTGGCTG GGATCCC AACCGGCCAGGGCCT Daud_2187 2301846 - 2301166 - | deoxyribonuclease V TERM 2686 2301217 - 2301201 - G 81 -13.7 -3.58726 | GCCGGTTAGACAGAA GGTGCGC CTG GCGCACC GGTTCCGGTAGGCGG Daud_2188 2302166 - 2301843 - | CutA1 divalent ion tolerance protein Daud_2189 2303564 - 2302167 - | cobyrinic acid a,c-diamide synthase TERM 2687 2303361 - 2303340 - G 76 -10.1 -3.85698 | opp_overlap 2303344 CGTCGCCCGCATAAA CGAACCGGC CAGT GTCGGTTCG TCCATCAGGAAACGG TERM 2688 2303495 - 2303509 + g 83 -7.8 -4.56597 | GGGCGGCGATCAGCG CAGCGG TAA CCGTTG TTTTTCCCGACCGGC TERM 2689 2303627 - 2303586 - R 89 -13.8 -3.53811 | gap 1, opp_overlap 2303591, overlap 2303588 2303590 2303591 GTCACCCGCCTTAAA GAC-ACGCTTAACCCGGGG TGGGT CCCCGGGTTAAGCTTTGGC AAAATTGTCGCTACT TERM 2690 2303624 - 2303588 - R 95 -15.2 -3.34715 | opp_overlap 2303591, overlap 2303586 2303590 2303591 CACCCGCCTTAAAGA CACGCTTAACCCGGGG TGGGT CCCCGGGTTAAGCTTT GGCAAAATTGTCGCT TERM 2691 2303622 - 2303590 - R 100 -17.8 -3.24232 | opp_overlap 2303591, overlap 2303588 2303586 2303591 CCCGCCTTAAAGACA CGCTTAACCCGGGG TGGGT CCCCGGGTTAAGCT TTGGCAAAATTGTCG TERM 2692 2303591 - 2303621 + r 100 -21.3 -3.56099 | opp_overlap 2303590 2303588 2303586 2303591 CCGCCTTAAAGACAC GCTTAACCCGGGG TGGGT CCCCGGGTTAAGC TTTGGCAAAATTGTC TERM 2693 2303621 - 2303591 - R 100 -21.3 -2.54325 | opp_overlap 2303591, overlap 2303590 2303588 2303586 CCGCCTTAAAGACAC GCTTAACCCGGGG TGGGT CCCCGGGTTAAGC TTTGGCAAAATTGTC Daud_2190 2303959 - 2303642 - | DsrC family protein Daud_2191 2305450 - 2304065 - | hypothetical protein Daud_2192 2306244 - 2305477 - | hypothetical protein TERM 2694 2306296 - 2306311 + r 74 -6.8 -4.2704 | gap 1, opp_overlap 2306296 GAGGGTCGATTGAAA CGG-CCC TCC GGGACCG TTTGTTCATAATGCC Daud_2193 2306663 - 2306481 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2695 2307208 - 2307185 - H 72 -3.8 -4.68456 | ACCACCAAAAAAGAA CCACGAAGGA GGTT TCCCTTATGG CCATTATACCACAAC TERM 2696 2308104 - 2308114 + G 76 -6.8 -4.48713 | CATCGTTTACGATTA CCGT GGA ACGG TTTATTGTTGCTGCC Daud_2194 2307205 - 2308536 + | transposase, IS4 family protein TERM 2697 2308641 - 2308657 + F 70 -5.1 -4.4715 | overlap 2308643 ATATACTCCATTTAC CCCAGTT GCT AACTGTG TTTTGTGGCTTGGGG Daud_2195 2308843 - 2309085 + | FmdB family regulatory protein TERM 2698 2309660 - 2309647 - g 71 -8.1 -3.84406 | opp_overlap 2309644 2309647 CGCGCAGGACAAGAA GGTGC TCCG GCACC TGCAGCGCCTCCTGT TERM 2699 2309764 - 2309715 - g 86 -15.1 -3.64703 | gap 2, opp_overlap 2309695 2309716, overlap 2309716 TCCGGGTGACCGAAA CCCTGG-GCCGGGT-TTCGGCCG TGATCG CGGCCGAAGACCCGGCACCAGTC GCCAACCTGCTTCAA TERM 2700 2309763 - 2309716 - g 87 -18.6 -2.78679 | gap 2, opp_overlap 2309695 2309716, overlap 2309715 CCGGGTGACCGAAAC CCTGG-GCCGGGT-TTCGGCCG TGATCG CGGCCGAAGACCCGGCACCAGT CGCCAACCTGCTTCA TERM 2701 2309826 - 2309867 + G 73 -8.6 -4.08767 | gap 1 CGTCGAACTGGGGCG CCCTGGAGGCCATGGGCGA AATCA TCGCCCACGCAC-CCGGGG TTTTCGGCGGCTACA Daud_2196 2309090 - 2310241 + | heat domain-containing protein Daud_2197 2310933 - 2310310 - | hypothetical protein Daud_2198 2311575 - 2310946 - | TPR repeat-containing protein TERM 2702 2311638 - 2311610 - R 95 -14.6 -3.64703 | gap 1, opp_overlap 2311600 2311595 GCGGCGGCAGGGAAA GAGGCCGC-CCGC AGTC GCGGGGCAGCCTC TCTCACCACCCTGAT Daud_2199 2311907 - 2311674 - | dissimilatory sulfite reductase B TERM 2703 2311764 - 2311776 + g 80 -6.2 -4.74103 | overlap 2311742 GCCCTCATTGATCAG GGCC GAGCA GGCC TTTTTGACTTGCAGG Daud_2200 2313126 - 2311936 - | sulfite reductase, dissimilatory-type beta subunit TERM 2704 2312175 - 2312197 + g 81 -13.4 -3.62046 | GCTTCGTCGCTTCCA CCACTTCCGG GAA CCGGGGGTGG TTGTTCGGCAGGTAC Daud_2201 2314560 - 2313139 - | sulfite reductase, dissimilatory-type alpha subunit TERM 2705 2315014 - 2315027 + r 100 -3.1 -5.96219 | GTTTTCGATTATTCC TGCCT GAAG AGGTA TTTTTTTTGTGACTG Daud_2202 2316325 - 2315069 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase Daud_2203 2317248 - 2316388 - | hypothetical protein TERM 2706 2316884 - 2316905 + g 83 -7.2 -4.6635 | overlap 2316904 ACACCCAAGGTGTCG GCGTCGGC CGGCCA GCCGAAGC TTTTGTTCAAGCTTT TERM 2707 2317403 - 2317377 - R 77 -8.6 -4.08216 | opp_overlap 2317377 GTATTTTGTGCAAAA CCGGTCCGGAGT GTT ACCGCTGACCGG TTTTCCACTCCTGGA Daud_2204 2317965 - 2317390 - | TPR repeat-containing protein Daud_2205 2319611 - 2318259 - | peptidase M23B TERM 2708 2318861 - 2318894 + g 79 -10.9 -3.85817 | gap 1, overlap 2318861 TTTCGCGGGTTTCCA CCAC-CCGGGCGGTGG TCA CCACCGTCAGGAGGGG TTTGTGACGGGCAAT TERM 2709 2319581 - 2319545 - G 84 -4.3 -5.1167 | gap 1, opp_overlap 2319553 2319566, overlap 2319547 AACTCAATAGAAAAA CGGCGATACCCAGCGG ATTGGG CCGCCGGAC-CCGCGG AGTTCTGCGACACAA Daud_2206 2321101 - 2319731 - | radical SAM domain-containing protein TERM 2710 2319997 - 2319979 - G 78 -3 -5.02074 | overlap 2319996 CCACTCCGGAAAAAA CGTCACCG AGC CAGAAACG GCTTTGACCGACGAA TERM 2711 2320146 - 2320136 - G 90 -2.4 -5.46698 | TTCAAAATGAAAAAA CCGG ACC CTGG CGTCGGCCTGGAAGG TERM 2712 2320662 - 2320651 - G 81 -7.2 -4.4267 | CCGGAAAATTCAAAA GCGG TTCT CCGC CGAAGAAGTCAATTT TERM 2713 2321222 - 2321202 - R 100 -15.5 -3.3287 | AAAAAGGCAGACTAA TACCCGGTG AAT CACCGGGTA CCACAAGAACAGCTA Daud_2207 2321384 - 2321235 - | hypothetical protein Daud_2208 2322074 - 2321409 - | CBS domain-containing protein TERM 2714 2321589 - 2321565 - G 76 -5.6 -4.56597 | overlap 2321567 CCGTTCCTTGAAAAA CTGGGTGATG TCGGC CAGCACCCCG ACCCGGTCCTCGGTG TERM 2715 2321777 - 2321793 + g 71 -9.4 -3.79747 | TCGGCATCTGCGGCG GGACCC AGACC GGGTCC TTTACTAGTGCCTCC TERM 2716 2322197 - 2322180 - R 81 -6.9 -4.75518 | CACATAAAACGAAAA CCAAGGG CGAA CCCCCGG TCTCGAATTGCTATT Daud_2209 2323988 - 2322696 - | adenylosuccinate synthase Daud_2210 2325484 - 2324108 - | FAD dependent oxidoreductase TERM 2717 2324776 - 2324749 - G 91 -12 -4.37886 | gap 1 TCAGTTCGTAGAAAA GCCG-GGTCAGGG GCT CCATGACCACGGC CGGCAATTCGACCCG Daud_2211 2326873 - 2325545 - | replicative DNA helicase TERM 2718 2326332 - 2326317 - G 71 -6 -4.38712 | opp_overlap 2326327 2326328 TCCAGGTCCACAAAA CCGGTG GGCA CGCCGG CAATCCGGCCTTTAT Daud_2212 2327315 - 2326863 - | ribosomal protein L9 Daud_2213 2328214 - 2327312 - | hypothetical protein TERM 2719 2327919 - 2327933 + g 74 -4.9 -4.56597 | GCGGCCAGGGTCTTC CGGTG GGCCA CGCCG TTTTTGAAACAAAAC TERM 2720 2328315 - 2328300 - R 100 -11.8 -4.8622 | opp_overlap 2328300 CGGCCCAAGGAAAAA GCGCCG CTGG CGGCGC TTTTCGGTGCTAAAT TERM 2721 2328300 - 2328315 + r 91 -11.8 -4.21462 | opp_overlap 2328300 CGGCCCAAGGAAAAA GCGCCG CTGG CGGCGC TTTTCGGTGCTAAAT Daud_2214 2328576 - 2328349 - | ribosomal protein S18 TERM 2722 2328631 - 2328613 - R 76 -5.2 -4.83169 | opp_overlap 2328613 2328613 AGCTTCTTAGAAAAA CTGCTGCT TAA AACGGCAG TGGTTCGTCATCGTC Daud_2215 2329048 - 2328620 - | single-strand binding protein Daud_2216 2329355 - 2329071 - | ribosomal protein S6 TERM 2723 2329602 - 2329578 - R 77 -11.3 -3.57406 | opp_overlap 2329578 2329577 2329569, overlap 2329576 GCCGCACGACAAATA CTCCCGAGCCA AGC CGGCCCGGGGG ATTTGCGTTCTATGA TERM 2724 2329789 - 2329811 + r 100 -19.2 -3.14132 | opp_overlap 2329791 CTTATGAGGGCGGAA GACCCTCCGG CCT CCGGAGGGTC TTGATAAGGAGCGAA TERM 2725 2329809 - 2329791 - R 93 -16 -3.03441 | opp_overlap 2329789 TATGAGGGCGGAAGA CCCTCCGG CCT CCGGAGGG TCTTGATAAGGAGCG Daud_2217 2330530 - 2329853 - | hypothetical protein Daud_2218 2332246 - 2331263 - | GTP-binding protein YchF TERM 2726 2331906 - 2331925 + g 76 -5.6 -4.66609 | gap 1, overlap 2331902 2331901 TCGGACCGGTGGGCC GCGTCACCG AGA CGG-GCCGC TTTTTCGATGCGATC Daud_2219 2332569 - 2332357 - | hypothetical protein TERM 2727 2332453 - 2332420 - G 76 -10.2 -3.86015 | overlap 2332421 GACCCCTTTGAGAAA CTGCGGGCGGGGGA GCAGAA TCACCCGGCCGCAA GTACGGCAACGCAGG Daud_2220 2333275 - 2332601 - | colicin V production protein TERM 2728 2332714 - 2332697 - G 73 -8.3 -4.03234 | CCCGTCGGACAGAAA GCCCGGC CCGA GCAGGGC ACTGGGGAAACTCAA TERM 2729 2332922 - 2332892 - G 71 -8.2 -3.89903 | opp_overlap 2332915, overlap 2332883 AAACAGGCCGACAAA GGTAACGGCGTCCA GCG CAGACGGCGCCACC GTGGAGGCGATCACT TERM 2730 2333234 - 2333220 - G 73 -7 -4.39002 | overlap 2333222 AAACCCCGGACAAAA CCGCGC CAG GCGCTG AAAGCAAGCAGAATA Daud_2221 2334388 - 2333303 - | hypothetical protein TERM 2731 2334254 - 2334232 - G 93 -7.7 -5.14985 | gap 1, overlap 2334235 CCAAATAGACAAAAA GAGCGGTGGC GAGC GCCAC-GCCC CAGAGTCCCCGGGTG Daud_2222 2334480 - 2335115 + | hypothetical protein TERM 2732 2335090 - 2335134 + T 72 -11.5 -3.08073 | opp_overlap 2335106 GCCTGCACGAGGCCC GAGTTGC-CGGAACCCAGGCT ATATA AGCCTGGGTTCCGCGCC-CGC TATCTTGGAAATCCT Daud_2223 2335371 - 2335108 - | hypothetical protein TERM 2733 2335380 - 2335412 + r 100 -11.9 -4.94992 | overlap 2335382 TCTGCAATAACCTCA CCTCCGTCGCCCTTA TTA TGTGGGCGGCGGACG TTTTTATGCGTTTCG TERM 2734 2335382 - 2335410 + r 76 -13.1 -2.72462 | overlap 2335380 TGCAATAACCTCACC TCCGTCGCCCTTA TTA TGTGGGCGGCGGA CGTTTTTATGCGTTT Daud_2224 2336051 - 2335416 - | phosphoribosyltransferase Daud_2225 2336618 - 2336142 - | hypothetical protein Daud_2226 2336707 - 2337504 + | ExsB family protein TERM 2735 2337587 - 2337634 + F 90 -17.6 -2.66316 | opp_overlap 2337567, overlap 2337585 CTCTTCTCCACGACG TGGCGTTGGGCCGCGTGTCGGT GGAG GCCGCCGCCCGGGCCAGCGCCA TCATCTGCTCCGGGG TERM 2736 2337838 - 2337817 - g 91 -3.5 -5.46657 | overlap 2337818 TACGCGAAGAAAAAA GCGGCGGCC TGCG GGGCACCGG GGTCAAGGTGCACGT TERM 2737 2338103 - 2338124 + G 71 -8.7 -3.89346 | overlap 2338102 ACAGGTACGGCTCTC GCCCCTG CCGCTTTC CAGGGGC TTTGTGCACTGCGCC Daud_2227 2337654 - 2338880 + | hypothetical protein Daud_2228 2339637 - 2339317 - | hypothetical protein Daud_2229 2340521 - 2339661 - | parB-like partition protein Daud_2230 2341296 - 2340532 - | cobyrinic acid a,c-diamide synthase TERM 2738 2341356 - 2341304 - R 85 -6.8 -4.85782 | gap 2, overlap 2341305 TTGCCCAAAAACAAA CCCCCTGCCTGCAGTTTCGCGGTGCG CAC CGCCCCGCGG-AC-GTTGGCACGGGA CGGAATTGATGGTGT Daud_2231 2342195 - 2341473 - | methyltransferase GidB TERM 2739 2341741 - 2341796 + gr 91 -15.2 -3.14132 | ACGCTCACCGGGGCC ACCGCCCGGGCCACGGCCCAATGG TAAGTGCC CCGGTGGGCCGGGTCCCGGCCGGC TTCCTCGGCGCGCCG Daud_2232 2344104 - 2342131 - | glucose inhibited division protein A TERM 2740 2343288 - 2343325 + gr 70 -7 -4.10429 | gap 1, opp_overlap 2343320, overlap 2343320 ACCGGGGCCCCGTGC CCTGGAT-GATCCCGGT ATACA GCGGGGAACGATCCAGG TTTTCCCGGATGATT Daud_2233 2345502 - 2344117 - | tRNA modification GTPase TrmE Daud_2234 2346135 - 2345515 - | single-stranded nucleic acid binding R3H domain-containing protein Daud_2235 2346979 - 2346077 - | 60 kDa inner membrane insertion protein TERM 2741 2346617 - 2346602 - GR 78 -11.8 -3.2794 | TGCTACCCACAGGAA CCCGGC GTGG GCCGGG TTGACATAGTCAAAA Daud_2236 2347217 - 2347002 - | hypothetical protein Daud_2237 2347539 - 2347210 - | ribonuclease P protein component TERM 2742 2347598 - 2347582 - R 89 -2.9 -5.4505 | overlap 2347584 CCGCGCAACAAAAAA GCCCG CCCACCT CAGGC TGTGAGCACCTTTCT Daud_2238 2347727 - 2347593 - | ribosomal protein L34 Daud_2239 2349289 - 2347871 - | hypothetical protein TERM 2743 2348021 - 2348033 + g 74 -4.8 -4.67353 | CAGTTGGATTGCCTC GGCT CCGAC AGCC TTTTTCAGTAGGTCG