TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.710735 %AT, 547364 nt, 3052 terms. Intergenic: 0.750279 %AT, H2T: 222215 nt, 1694 terms; T2T: 54531 nt, 1151 terms; H2H: 55393 nt, 952 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|197294169|ref|NC_010544.1| Candidatus Phytoplasma australiense, complete genome (length 879959) TERM 1 181 - 159 - g 70 -5.1 -4.79667 | opp_overlap 166, overlap 148 175 AAAATTTATCAAAAA TAAAATATA TAAAC TATATTTTA AAAAAATAAAAGAAA TERM 2 540 - 528 - g 100 -4.9 -6.38039 | opp_overlap 528 GATTCAAAAAAAAAA CAAAA AAG TTTTG TATGTTAAAGCAGAT TERM 3 887 - 872 - g 71 -2.6 -5.42198 | TTTTAAAAAAGAAAA TTTTAG AATT CCAAAA TAACAACCCTTTAAA dnaA 1 - 1368 + | Chromosomal replication initiator protein TERM 4 2107 - 2097 - g 74 -2.6 -5.69473 | overlap 2089 2098 CAGATGATAAAAAAA TTTT TTT AAAA ATCGATAATTTATGG TERM 5 2231 - 2241 + G 74 -4 -5.20328 | GTAATGAAAGTTTTA GAAA GAA TTTC TTTATTTTTTTCAAA dnaN 1418 - 2554 + | DNA polymerase III beta subunit TERM 6 2630 - 2653 + F 72 -5.2 -4.95854 | opp_overlap 2633, overlap 2631 2633 CTGTCTTTTTGTGAT AAACGCCCTT TTTG AAGGGCGTAA TTTTTAAGTTTTTTC TERM 7 2631 - 2652 + F 79 -8.7 -3.55072 | opp_overlap 2633, overlap 2630 2633 TGTCTTTTTGTGATA AACGCCCTT TTTG AAGGGCGTA ATTTTTAAGTTTTTT TERM 8 2650 - 2633 - f 100 -11.3 -3.85698 | opp_overlap 2631 2630 2633 TCTTTTTGTGATAAA CGCCCTT TTTG AAGGGCG TAATTTTTAAGTTTT TERM 9 2633 - 2650 + F 93 -11.3 -3.31103 | opp_overlap 2633, overlap 2631 2630 TCTTTTTGTGATAAA CGCCCTT TTTG AAGGGCG TAATTTTTAAGTTTT TERM 10 2831 - 2802 - f 81 -5.3 -5.34857 | opp_overlap 2803, overlap 2803 CTAAAGAAAACAAAA TTTATTTTTTTAA TAAT TTAAAAAAATAAT TTGACGTTTTTTCTT TERM 11 2830 - 2803 - f 79 -8.8 -3.78474 | opp_overlap 2803, overlap 2802 TAAAGAAAACAAAAT TTATTTTTTTAA TAAT TTAAAAAAATAA TTTGACGTTTTTTCT TERM 12 2803 - 2830 + F 81 -8.8 -3.84644 | opp_overlap 2803 2802 TAAAGAAAACAAAAT TTATTTTTTTAA TAAT TTAAAAAAATAA TTTGACGTTTTTTCT TERM 13 2978 - 2936 - f 95 -12.4 -3.66803 | opp_overlap 2949 2969 2976, overlap 2949 TTTTAATACGTGAAA TATAATAAAAAAACTACCTA ATT TAGGTAGTTTTTTTAGTTTA AAATATATTTTAATT TERM 14 2965 - 2949 - f 100 -9.5 -5.94214 | opp_overlap 2949, overlap 2936 AATATAATAAAAAAA CTACCTA ATT TAGGTAG TTTTTTTAGTTTAAA TERM 15 2949 - 2965 + F 100 -9.5 -5.72207 | opp_overlap 2949 2936 AATATAATAAAAAAA CTACCTA ATT TAGGTAG TTTTTTTAGTTTAAA TERM 16 4025 - 4043 + F 90 -6.1 -5.96894 | AATAAGATATAATGG GTTTTGA GTTCA TCAAAAC TTTTTTTATTTGGGT TERM 17 5286 - 5272 - g 73 -4.4 -5.0666 | CAGTTAAAAAAGAAA TAAAAA AAA TTTTTA CCTTTCCTAAAATCA PAa_0004 4983 - 5816 + | Putative C-5 cytosine-specific DNA methylase TERM 18 6439 - 6425 - g 86 -2.2 -6.17669 | overlap 6427 AACAAAATAAAAAAA TATTTT ATA AAAACA TACTATTGGAAAATA TERM 19 6535 - 6510 - g 100 -14.9 -3.84406 | opp_overlap 6502 GGTTGATTATAATAA TGTTTTGACCG ATAT CGGTCAAAACA TTGCAACATTAGATT PAa_0005 5809 - 6813 + | hypothetical protein TERM 20 7168 - 7184 + F 89 -9.4 -4.3155 | overlap 7169 AGTATAATATGTAGA CCCCCT CAGCT AGGGGG GTTTTTTTATTTTTT TERM 21 7169 - 7185 + F 100 -7.2 -6.28401 | overlap 7168 GTATAATATGTAGAC CCCCTC AGCTA GGGGGG TTTTTTTATTTTTTA TERM 22 7680 - 7663 - f 100 -8.5 -6.19302 | opp_overlap 7665 ATATAATAAAAAAAA GACACTA ATTT TAGTGTC TTCCAAGTTTAAACT TERM 23 8171 - 8182 + F 73 -4.4 -5.11475 | TTAGTTGTCAAATTG GACA AACG TGTC TTTTCTGTTTTTTTG TERM 24 9163 - 9148 - g 79 -4.8 -5.40072 | GTGGCTTTAAAAAAA GAATTT TTAA AAATTC CTGATGCTAATTTCG TERM 25 9650 - 9664 + G 76 -7.2 -4.2828 | TTGAAAATAAAGTTT TTTCGT TAA ACGAAA TTTTAATCGATGGCA PAa_0006 8338 - 10023 + | Putative hydrolase of the metallo-beta-lactamase superfamily TERM 26 10392 - 10382 - g 77 -5.4 -5.10163 | overlap 10377 AATGTGAAAATAAAA GTTG CTA CAAC CTCTACTAGCTGTCT degV 10370 - 11221 + | DegV family protein TERM 27 11755 - 11804 + T 100 -18.5 -4.37658 | opp_overlap 11758 11763 TTGCATCACTTTTAA TAATTAAAGTCAAATTTACTTAT TTTG GTAGGTAAATTTGACTTTAATTA TTTTATAAACAAATT TERM 28 11801 - 11758 - T 95 -12.9 -3.63991 | opp_overlap 11755, overlap 11763 CATCACTTTTAATAA TTAAAGTCAAATTTACTTA TTTTGG TAGGTAAATTTGACTTTAA TTATTTTATAAACAA TERM 29 11796 - 11763 - T 79 -8.4 -4.07618 | opp_overlap 11755, overlap 11758 CTTTTAATAATTAAA GTCAAATTTACTTA TTTTGG TAGGTAAATTTGAC TTTAATTATTTTATA PAa_0008 12040 - 11861 - | hypothetical protein TERM 30 12070 - 12027 - G 70 -5.7 -4.37658 | opp_overlap 12058, overlap 12028 AATTCTTCCATAAAA CTTCTTTTAAACAAATTAA ATTAAA TTACTTTGTTTAAAAAAAA CATATATACGATCTT PAa_0009 12268 - 12089 - | hypothetical protein PAa_0010 13058 - 12270 - | Putative hydrolases of the haloacid dehalogenase-like (HAD) superfamily TERM 31 12936 - 12954 + g 80 -8.2 -4.17023 | TCTTCCGGTGGCAAT TCCTAATG TTA CATTGGGA TTTTGAGCTAATTGA TERM 32 13068 - 13046 - G 84 -3.6 -5.90981 | opp_overlap 13050, overlap 13050 CGATATCAAAAAAAA TTAATTTTTT CAT AAAAAATTCA TCACCTATTCTATTT TERM 33 13361 - 13377 + G 76 -3.8 -5.45652 | ATTGTTGATTCAGGT TTTTCT TTTTC AGAAAA TTTTTTATTAGGAAT PAa_0011 13226 - 14914 + | Metallo-beta-lactamase family protein TERM 34 15612 - 15602 - g 71 -2.6 -5.52986 | ATCTTATTAAAAAAA TTTT TTG AAAA TAAAAATAATGACGA spxA 15179 - 15643 + | Putative regulatory protein spx TERM 35 15851 - 15880 + F 76 -2.9 -5.93252 | opp_overlap 15835, overlap 15852 AAAAAAATAATATTT TTCCAAATTACTT ATTA ACGTAGTTTGGAC TTTTTTGTTTTTGGA TERM 36 15852 - 15879 + F 71 -6.4 -4.13511 | opp_overlap 15835, overlap 15851 AAAAAATAATATTTT TCCAAATTACTT ATTA ACGTAGTTTGGA CTTTTTTGTTTTTGG TERM 37 16011 - 15997 - f 78 -4.4 -5.51078 | AAAACAAAAATAAAA TATTTT AAA AAAATA AAATGAGATTATTTT TERM 38 16572 - 16592 + F 71 -7.1 -3.90987 | opp_overlap 16549 16546 16566 16572 16577, overlap 16546 16566 16570 TAATAATGATATTAA TATAATAAA TTT TTTATTATA TGTTTTAATTATTTA TERM 39 16808 - 16825 + F 100 -8.5 -6.28401 | TAAATCTCTCTCAAG CCTTCTT TTTT AAGAAGG TTTTTTTGTTTTTTA TERM 40 18700 - 18667 - f 83 -3.9 -5.81412 | opp_overlap 18669 18674 18694 18697, overlap 18668 18669 18674 TTGATTCAAAAAAAA TTTAAAAGCCCTC GTTAGTTT GAGGGCTTTTATT TTTATAAAAATATTC TERM 41 18699 - 18668 - f 73 -7.4 -4.07763 | opp_overlap 18669 18674 18694 18697, overlap 18667 18669 18674 TGATTCAAAAAAAAT TTAAAAGCCCTC GTTAGTTT GAGGGCTTTTAT TTTTATAAAAATATT TERM 42 18669 - 18698 + F 100 -11.6 -4.84761 | opp_overlap 18668 18667 18669 18674, overlap 18674 18694 18697 GATTCAAAAAAAATT TAAAAGCCCTCG TTAGTT TGAGGGCTTTTA TTTTTATAAAAATAT TERM 43 18698 - 18669 - f 87 -10.9 -3.03573 | opp_overlap 18669 18674 18694 18697, overlap 18668 18667 18674 GATTCAAAAAAAATT TAAAAGCCCTC GTTAGTTT GAGGGCTTTTA TTTTTATAAAAATAT TERM 44 18674 - 18693 + F 90 -7.1 -5.35224 | opp_overlap 18669 18668 18667 18674, overlap 18669 AAAAAAAATTTAAAA GCCCTCG TTAGTT TGAGGGC TTTTATTTTTATAAA TERM 45 18693 - 18674 - f 77 -6.4 -4.59309 | opp_overlap 18674 18669, overlap 18669 18668 18667 AAAAAAAATTTAAAA GCCCTC GTTAGTTT GAGGGC TTTTATTTTTATAAA PAa_0015 18841 - 19035 + | hypothetical protein PAa_0016 19340 - 19909 + | hypothetical protein PAa_0017 19933 - 20166 + | hypothetical protein TERM 46 20571 - 20552 - T 91 -5 -6.09196 | TTTAAAAGAAAAAAA GACCAACT AAAA AGTCAGTC TTAAATGTTTGAATT TERM 47 20737 - 20762 + T 100 -9.1 -5.93252 | opp_overlap 20729, overlap 20729 CAAAATAGTATTTTT CCAAACTACTT ATTA ACGTAGTTTGG TTTTTTGTTTTTAGC TERM 48 20912 - 20880 - T 73 -7.9 -3.67737 | opp_overlap 20884 GACAAAATTTTGAAA GGTCTTTTCCTAAAA TGA TTGTAGAAAAAAACC AATCTATTTTTTTAA thrS 22964 - 21039 - | Threonyl-tRNA synthetase PAa_0019 23938 - 22997 - | Exopolyphosphatase-related protein trmE 25384 - 24023 - | tRNA modification GTPase PAa_0021 26666 - 25686 - | Phosphoesterase family protein ugpB 28268 - 26694 - | Sugar transport system substrate-binding protein, periplasmic component TERM 49 26896 - 26885 - G 73 -3 -5.40072 | opp_overlap 26885, overlap 26886 CGTTGTTTAAAAAAA CTAA AAGT TTAG CTTTTAAAAGTTCTT TERM 50 27574 - 27584 + g 74 -6.8 -4.27843 | CCATCTTTTAATTCG CCAG TTT CTGG TTGTTTGTCTTTAAA ugpE 29136 - 28252 - | Sugar transport system, permease protein TERM 51 29105 - 29076 - G 73 -4.6 -5.12971 | gap 1, opp_overlap 29081 AATATTTAACAAAAA TAAAAA-AAAAGC TTGGG GCTTTTCTTTTTA AAATCAATAAATTTG ugpA 30071 - 29157 - | Sugar transport system, permease protein TERM 52 30043 - 30053 + g 71 -2.6 -5.55664 | overlap 30037 TTATGCTTATTTTTA TTTT TAA AAAA TTTTTTTAATGCTGA TERM 53 30079 - 30054 - G 74 -4.9 -5.03314 | opp_overlap 30054 TTTATTTTTAAAAAA TTTTTTTAATG CTGA CATTTAAAAAA TCCTATTTTCTGTTT malK 31178 - 30072 - | ABC-type sugar transport system, ATPase component TERM 54 30754 - 30773 + g 89 -6.4 -5.38047 | ACTCTTTGTTGTTGC CCTCCTGA TAAT TCATGAGG TTTTTTGTCTAAATG TERM 55 31253 - 31274 + r 75 -3.9 -5.58051 | TTGTCTTAAATGTTT TAAAAGTTT AGAA AAATTTTTA TTTTATTTTTTCTTT TERM 56 31359 - 31374 + r 72 -6.2 -4.40882 | opp_overlap 31359 31358 31361 AATTTAATTAAAATT CATCAA CTTT TTGATG TTCTTTTAATTTCTG TERM 57 31596 - 31538 - R 77 -7.2 -4.4784 | opp_overlap 31538 31542 31543 31552, overlap 31549 31552 GAAATTGCAAACAAA TGTTTTTAAAACAATTTTTTTAAATTTT TTG AAAACTTAAAAAAATTGTGATAATTACA TGTGTCTTGAGATTA TERM 58 31585 - 31549 - R 100 -13.5 -4.10453 | opp_overlap 31538 31542 31543 31552, overlap 31538 31552 CAAATGTTTTTAAAA CAATTTTTTTAAATTTT TTG AAAACTTAAAAAAATTG TGATAATTACATGTG TERM 59 31582 - 31552 - R 86 -9.4 -4.17316 | opp_overlap 31542 31543 31552, overlap 31549 31538 ATGTTTTTAAAACAA TTTTTTTAAATTTT TTG AAAACTTAAAAAAA TTGTGATAATTACAT asnS 33643 - 32270 - | Asparaginyl-tRNA synthetase TERM 60 33211 - 33192 - G 70 -2.2 -5.44119 | overlap 33193 33194 TTGATGTGAAAAAAA CCTTTTTT ATGA AAAAAATG ATGCAAGGCGAAAAA TERM 61 33253 - 33228 - G 71 -4 -5.09426 | TGCAAGGCGAAAAAA GCAGTACTTC TAATGC GAAAAACTGC TCCAAAAAGTTTTGT TERM 62 34234 - 34251 + r 86 -4.3 -5.91981 | opp_overlap 34226 34218 34234, overlap 34226 ACATAATTTAAATAT TTTAATT ATAT AATTAAA TTTTTTTTAGGTTTT TERM 63 34324 - 34309 - R 70 -4.8 -4.90455 | overlap 34315 AGATATTTATAAAAA CTTAAA CACC TTTAAG TGCAAATGTAAATCA PAa_0027 34531 - 34337 - | hypothetical protein TERM 64 36068 - 36035 - R 100 -10.7 -5.78622 | gap 1, opp_overlap 36035 36047 GTATTTTAAAAAAAA CAACAATAAAATCTTT TAA AAAG-TTTTATTGTTG TTTTAAAATATTTAT TERM 65 36035 - 36068 + r 95 -10.7 -4.2243 | gap 1, opp_overlap 36035, overlap 36047 GTATTTTAAAAAAAA CAACAATAAAATCTTT TAA AAAG-TTTTATTGTTG TTTTAAAATATTTAT PAa_0030 36536 - 36144 - | hypothetical protein TERM 66 38284 - 38300 + H 77 -8.7 -3.45788 | opp_overlap 38284 38283 38278, overlap 38283 38270 TTCCAATAATAAAAT CATCTGC GTA GCGGATG TATTCTATTCTCGGG TERM 67 39246 - 39234 - H 74 -9.1 -3.02144 | opp_overlap 39233 39232 39229 TTAGTTTTCCTAAGA GCCCT GGG AGGGC AATTATCATTGTTAT TERM 68 41165 - 41201 + H 100 -10.5 -5.71712 | opp_overlap 41157 41165 41193 AGAACAACAAATTTA TCCAAATTGTTTATT AATTAAA AATAAACAGTTTGGA TTTTTTTGTATCCAA TERM 69 41220 - 41193 - H 91 -8.6 -4.96773 | opp_overlap 41165, overlap 41165 41157 TTAATTAAAAATAAA CAGTTTGGAT TTTTTTGT ATCCAAACTG AGAAAAAGGAGTTTG dnaB 41240 - 42523 + | Replicative DNA helicase PAa_0038 42546 - 43178 + | hypothetical protein tmk 43168 - 43815 + | Thymidylate kinase PAa_0040 43835 - 44011 + | hypothetical protein PAa_0041 44092 - 44547 + | hypothetical protein himA 44540 - 44857 + | DNA-binding protein HU TERM 70 44923 - 44904 - g 72 -6.6 -4.15029 | AGTTGATAGAAATAA TTTTTTCA AAAA TGAAAAAA AAGCTACTATTTATA TERM 71 45417 - 45430 + G 70 -5.3 -4.53777 | opp_overlap 45415 45417 TGGTCTTCCCAAAGA CGTTT TTGA AAACG TTGTTTTTCATTCAG PAa_0043 44881 - 45558 + | Putative N6 adenine-specific DNA methyltransferase TERM 72 45863 - 45849 - g 91 -7.2 -5.21459 | AAAAACAAAAAGAAA TCGTTT AAA AAACGA AGAAAAGTTATTAAA PAa_0045 45699 - 45887 + | hypothetical protein PAa_0046 45903 - 46343 + | hypothetical protein TERM 73 46406 - 46424 + G 77 -6.2 -4.72029 | CTTTAATGTTTATCA TTAAAAAA ATC TTTTTTAA TTTTGTTCCATTGCC PAa_0047 46336 - 46572 + | hypothetical protein TERM 74 47557 - 47539 - g 74 -6.8 -4.29621 | overlap 47542 47555 GATAAACAAATTAAA CAACTTCA AAA TGAAATTG AAGCAATCAAAAGCC TERM 75 48583 - 48567 - g 70 -5.1 -4.72272 | GCCGTTTATGAAAAA CCCTTTT GAG AAATGGG AAGTAAAAGACAGCA PAa_0048 46774 - 48894 + | Putative IMP dehydrogenase/GMP reductase TERM 76 49188 - 49158 - f 78 -8.6 -3.96449 | CAACACCCCAAATAA TTCAAAATTTAAAT ACC ATTTCAATTTTGAA TAACAACAAACATAT TERM 77 51188 - 51170 - f 100 -7.5 -5.31545 | AACAACATGAAAAAA CTTTGGA AGAAA TCCAAAG ACAAATTACAAATTA TERM 78 52135 - 52125 - f 78 -6.8 -4.77157 | TGAATTGATTAAAAA CAGC AAT GCTG ATGCTACATTAGTTA TERM 79 53938 - 53972 + F 100 -9.6 -5.95166 | opp_overlap 53938 ATAAATATTTTAAAA CAACAATAAAATTTCT TAA AAAGATTTTATTGTTG TTTTTTTTAATTAAA TERM 80 53972 - 53938 - f 89 -9.6 -4.2243 | opp_overlap 53938 ATAAATATTTTAAAA CAACAATAAAATTTCT TAA AAAGATTTTATTGTTG TTTTTTTTAATTAAA TERM 81 55243 - 55261 + F 74 -8.1 -3.34364 | opp_overlap 55243, overlap 55242 TAATTAAAACTATAA GCCCTTC ATAAC GGAGGGC ATTTTGTGTAGGTTT TERM 82 55495 - 55524 + F 100 -9.7 -5.4505 | opp_overlap 55493, overlap 55481 55479 GTAAAAAAATTATTT TTTTATATTTTAT ACCT ATAAAATATAAAA TTTTTTCTTAAAAAA TERM 83 55539 - 55525 - f 70 -4.4 -4.94487 | overlap 55493 CTATAAAATATAAAA TTTTTT CTT AAAAAA GCAATTAGAAAACTG TERM 84 55918 - 55894 - f 74 -5.9 -4.60258 | opp_overlap 55896 TTACTAAAGAAGAAA TAGATAAATTA TTT TAATTTTTCTA CATTAAATTATCAAT TERM 85 55986 - 56007 + F 100 -7.3 -6.09196 | opp_overlap 55988 TAAAAAAACTTTTAA GACAGACTT TTTT AAGCCTGTC TTTTTTTCTTTTCAA TERM 86 56520 - 56496 - f 70 -3 -5.47914 | AAAAACGACAAAAAA CATCAAAACA AGAGA TATTTTAATG CTTTTTATTAAAAGT TERM 87 56663 - 56681 + F 70 -6.2 -4.31412 | opp_overlap 56663 AGCGTTAACAGCAAA TAAAAAAA TAT TTTTTTTA TTTTACTGCGTATTT nrdA 57002 - 59572 + | Ribonucleotide reductase, alpha subunit TERM 88 59643 - 59668 + G 100 -11.3 -5.95946 | TAAAAATGATTTTTT CCAAACTGCTT ATTA AAGTAGTTTGG TTTTTTTGTTATTCA PAa_0057 59633 - 59806 + | hypothetical protein TERM 89 59813 - 59789 - f 80 -6.7 -5.00616 | TTTTGTTTTAAAAAA TTATTCTTTAA AAC TTAAAAAATAA TAGATAATTTTATAT TERM 90 60111 - 60086 - f 100 -9.9 -5.98675 | opp_overlap 60091 60103, overlap 60087 60103 GATAAAAACAAAAAA CCAAACTACTT TAAT AAGTAGTTTGA AAAAATACTATTTTG TERM 91 60110 - 60087 - f 100 -11.2 -4.15545 | opp_overlap 60091 60103, overlap 60086 60103 ATAAAAACAAAAAAC CAAACTACTT TAAT AAGTAGTTTG AAAAAATACTATTTT TERM 92 60353 - 60363 + F 83 -4 -5.89921 | opp_overlap 60353 AATTATCATTAATAT TGAA ACA TTCA TTTTTTTATTCTCCT gepA 60583 - 61074 + | Uncharacterized phage-associated protein eno 62092 - 63384 + | Enolase gpmI 64873 - 66423 + | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase pykA 66465 - 67820 + | Pyruvate kinase TERM 93 67928 - 67942 + T 70 -4.4 -5.00616 | TCTTACGAAATAATT TAAAAA CAC TTTTTA TTTTTTCCAAAAAAA TERM 94 67963 - 67986 + T 85 -6 -5.60993 | TCCAAAAAAAGTTGG GACTGACTTA TTTT TTAGTCGGTC TTTTTTTGTACCCAA TERM 95 68516 - 68493 - T 100 -8.3 -5.93252 | opp_overlap 68489 68493 TTCAAAAAGAAAAAA GACTAACTT GAAAAA AAGTTAGTC TTAATTATTATTTAT TERM 96 68493 - 68516 + T 76 -8.3 -3.66439 | opp_overlap 68493, overlap 68489 TTCAAAAAGAAAAAA GACTAACTT GAAAAA AAGTTAGTC TTAATTATTATTTAT PAa_0062 68809 - 68558 - | hypothetical protein TERM 97 68832 - 68846 + r 70 -4.4 -4.94487 | overlap 68845 CAGTTTTCTAATTGC TTTTTT AAG AAAAAA TTTTATATTTTATAC TERM 98 68876 - 68847 - R 100 -9.7 -5.4505 | opp_overlap 68845, overlap 68870 68872 TTTTTTAAGAAAAAA TTTTATATTTTAT ACTT ATAAAATATAAAA AAATGATTTTTTTAC PAa_0063 70317 - 69145 - | Putative phage integrase TERM 99 70402 - 70435 + r 78 -7.8 -4.2243 | gap 1, opp_overlap 70402 AATAATTGAAAAAAA CAACAATAAAA-CTT CTTAA AAGATTTTATTGTTG TTTTAAAATATTTAT TERM 100 70435 - 70402 - R 100 -8.5 -5.57054 | gap 1, opp_overlap 70402 AATAATTGAAAAAAA CAACAATAAAA-CTTC TTA AAAGATTTTATTGTTG TTTTAAAATATTTAT PAa_0064 70836 - 70471 - | hypothetical protein PAa_0065 71949 - 70867 - | hypothetical protein TERM 101 71175 - 71191 + g 70 -5.1 -4.72272 | TGCTATCTTTTACTT CCCATTT GTC AAAAGGG TTTTTCATAAACGGC TERM 102 72037 - 72008 - R 75 -8.8 -3.25072 | gap 1, overlap 72003 TGTATCATAATCTAA TCTGGTAATGCAA AAAAA TTGCATTACC-GA CCAAACCATGTTTTA TERM 103 73640 - 73658 + r 86 -7.5 -4.77216 | TAATTTGTAATTTGT CTTTGGA TTTCT TCCAAAG TTTTTACATGTTGTT PAa_0068 77549 - 75483 - | Putative IMP dehydrogenase/GMP reductase TERM 104 75812 - 75828 + g 70 -5.1 -4.72272 | TGCTATCTTTTACTT CCCATTT GTC AAAAGGG TTTTTCATAAACGGC TERM 105 76838 - 76856 + g 74 -6.8 -4.29621 | overlap 76828 76835 GGTTTTTGATTGCTT CAATTTCA TTT TGAAGTTG TTTAATTTGTTTATC PAa_0069 78235 - 77558 - | Putative N6 adenine-specific DNA methyltransferase TERM 106 77699 - 77686 - G 70 -5.3 -4.53777 | opp_overlap 77686 77684 CTGAATGAAAAACAA CGTTT TCAA AAACG TCTTTGGGAAGACTA TERM 107 78193 - 78212 + g 72 -6.6 -4.15029 | TATAAATAGTAGCTT TTTTTTCA TTTT TGAAAAAA TTATTTCTATCAACT himA 78576 - 78259 - | DNA-binding protein HU tmk 79773 - 79126 - | Thymidylate kinase dnaB 81701 - 80418 - | Replicative DNA helicase TERM 108 81721 - 81748 + H 70 -4.2 -4.96773 | opp_overlap 81741, overlap 81740 81747 CAAACTCCTTTTTCT CAGTTTGGAT ACAAAAAA AACCAAACTG TTTATTTTTAATTAA TERM 109 81775 - 81741 - H 100 -9.6 -6.02914 | opp_overlap 81721 81740 81747 TGGATACAAAAAAAA CCAAACTGTTTATT TTTAATT AATAAACAATTTGG ATAAATTTGTTGTTC TERM 110 82088 - 82043 - H 89 -8.7 -4.71828 | gap 1, opp_overlap 82051 ATTTTATTAATAAAA TTGTATAATGGTGATAAGTGAT ATG ATTAATTATCACCATTAT-CAA GAAAGGTAAATAAAT TERM 111 82051 - 82081 + H 80 -9.2 -3.28924 | opp_overlap 82043 AATAAAATTGTATAA TGGTGATAAGTGAT ATG ATTAATTATCACCA TTATCAAGAAAGGTA PAa_0074 82938 - 83288 + | hypothetical protein TERM 112 83345 - 83335 - T 80 -2.6 -5.99154 | TATTAAACAAAAAAA TTAT TAA ATAA AATACTTTTCAAATA TERM 113 83752 - 83736 - T 73 -8 -3.70469 | opp_overlap 83736 AATCACAACCCTAAA GACCCT GAGAG AGGGTC TTTTTTATTTAACCA TERM 114 83736 - 83752 + T 100 -8 -5.63517 | opp_overlap 83736 AATCACAACCCTAAA GACCCT GAGAG AGGGTC TTTTTTATTTAACCA TERM 115 83785 - 83803 + T 70 -2.5 -5.60993 | gap 1, overlap 83789 CTTATCAAACATCCA GACTCTTT AAAC AAAG-GTC TTTTTTTATACCCAA TERM 116 84232 - 84222 - T 73 -3.2 -5.58209 | overlap 84223 TCAAAGCCAAAAAAA CCCT TTT AAGG AGAAATATCCTCAAA TERM 117 85771 - 85793 + T 100 -10.5 -5.75538 | opp_overlap 85772, overlap 85772 TCAATCTAATTTATA ACCCCCCTC TAGTT GAGGGGGGG TTTTTATTTTTTCCA TERM 118 85772 - 85792 + T 100 -14 -4.02882 | opp_overlap 85772, overlap 85771 CAATCTAATTTATAA CCCCCCTC TAGTT GAGGGGGG GTTTTTATTTTTTCC TERM 119 85792 - 85772 - T 100 -14 -3.43564 | opp_overlap 85772 85771 CAATCTAATTTATAA CCCCCCTC TAGTT GAGGGGGG GTTTTTATTTTTTCC TERM 120 86058 - 86017 - T 100 -12.5 -4.19735 | opp_overlap 86019, overlap 86019 86032 GTGGGTAAAACTAAA CACCAATTCAAAAAAGCCC TCCA AGGCTGTTTTGAATTGGTT TGTGATGAGTAATGA TERM 121 86019 - 86056 + T 100 -14.4 -3.98214 | opp_overlap 86017 86019 86032 GGGTAAAACTAAACA CCAATTCAAAAAAGCC CTCCAA GGCTGTTTTGAATTGG TTTGTGATGAGTAAT TERM 122 86056 - 86019 - T 100 -15.1 -3.695 | opp_overlap 86019, overlap 86017 86032 GGGTAAAACTAAACA CCAATTCAAAAAAGCCC TCCA AGGCTGTTTTGAATTGG TTTGTGATGAGTAAT TERM 123 86043 - 86032 - T 70 -3.6 -5.17576 | opp_overlap 86019, overlap 86019 86017 CACCAATTCAAAAAA GCCC TCCA AGGC TGTTTTGAATTGGTT TERM 124 86142 - 86113 - T 82 -9.7 -3.33605 | opp_overlap 86110 86106 86104 86115 86138, overlap 86106 86138 86141 AAACATAATCATTAA TATTATTTATTTA ATCT TAAATAAATAATA TAATCATATTATATA TERM 125 86199 - 86171 - T 95 -10.7 -4.26351 | opp_overlap 86171 TAGTAATTTAATAAA TATATTTTAAAAT TTA ATTTTAAAATATA TTTTTGAGTTATAAT TERM 126 86171 - 86199 + T 100 -10.7 -4.78752 | opp_overlap 86171 TAGTAATTTAATAAA TATATTTTAAAAT TTA ATTTTAAAATATA TTTTTGAGTTATAAT PAa_0080 87786 - 87478 - | hypothetical protein PAa_0081 87870 - 88112 + | hypothetical protein TERM 127 88324 - 88309 - T 100 -5.4 -6.20267 | CTAAAAACAAAAAAA GTTCCC AAAA AGGAAC TTACAGCAGAAATTC PAa_0082 90049 - 89120 - | hypothetical protein TERM 128 89666 - 89676 + g 73 -5.4 -4.6526 | ATAAGATAAATTTTT GACA AAG TGTC TTTTTGGAAATTTAT TERM 129 89912 - 89886 - G 74 -8.2 -3.55444 | opp_overlap 89884 TTTTGATTGGCTAAA GGTTTAAAAAAA ACT TTTTTTTGAACC CCCTTTAATTCTCTT TERM 130 89960 - 89972 + g 87 -2.7 -6.17669 | TGAAAAATGTTTTAG TTCTT TGA AAGGA TTTTTTTCTTTTATT TERM 131 90240 - 90225 - R 90 -6.2 -5.95286 | opp_overlap 90225, overlap 90218 ACTAAAAAGAAAAAA GAGATT TTTC AATCTC TTTTAAGCCTTTATT PAa_0083 91340 - 90243 - | Probable phage associated protein TERM 132 91061 - 91049 - G 70 -6.3 -4.16943 | opp_overlap 91044 91049 CTTCATACTCTAAAA GTTGA CCA TCAAC TTCTACTGATTTTAT thyA 92493 - 93359 + | Thymidylate synthase folA 93356 - 93853 + | Dihydrofolate reductase plsC 93847 - 94635 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase PAa_0087 94880 - 95308 + | hypothetical protein rpsD 95524 - 96120 + | 30S ribosomal protein S4 TERM 133 96121 - 96153 + F 71 -7.1 -3.91213 | opp_overlap 96128, overlap 96128 TTTTATAATAGATAA CTGAAAACACCTTTT AAA ACAAGGTGTTTTTTG TATTTGTTTATGATT TERM 134 96146 - 96128 - f 70 -6 -4.3487 | opp_overlap 96128 96121 ATAGATAACTGAAAA CACCTTTT AAA ACAAGGTG TTTTTTGTATTTGTT TERM 135 96128 - 96146 + F 85 -6 -5.61913 | opp_overlap 96128, overlap 96121 ATAGATAACTGAAAA CACCTTTT AAA ACAAGGTG TTTTTTGTATTTGTT TERM 136 96401 - 96384 - f 72 -4.9 -5.0133 | TATCGCTTTAAAAAA GTTGTCT AAAA AAACAAC GTAATGATTTATTAT TERM 137 96592 - 96578 - g 78 -5.8 -4.94262 | opp_overlap 96578 96583 TAGACCAAAAACAAA TTCTTT TTC AAAGAA ATTTATACGGACCCA TERM 138 96648 - 96636 - g 84 -3.5 -5.89659 | overlap 96622 AGAAAAAAATAAAAA TTTTT GTC AAAAA ATAATAAAATTGATT TERM 139 97955 - 97944 - g 73 -3 -5.40072 | TGTTGCTCAAAAAAA CATT ATTC AATG TAATGGTCCCATTCA TERM 140 98965 - 98981 + G 81 -2.3 -6.08342 | TTTATTAGAGATGCT TTACAAT TAG ATGGTAA TTTTTTTCTTTCTTC mgtA 96454 - 99102 + | Cation transport P-ATPase PAa_0090 99142 - 99885 + | hypothetical protein TERM 141 100740 - 100752 + G 80 -6.3 -4.99035 | CAGTTCATATGGGTT CCAAA GCA TTTGG TTTTTATCTGAATAC degV 99914 - 100780 + | Uncharacterised BCR PAa_0092 101214 - 101414 + | hypothetical protein TERM 142 101709 - 101699 - f 73 -5.4 -4.74103 | opp_overlap 101699 TGTGTAATTGAAAAA GGTT TCA AACC TACCTTAATTTTTTT TERM 143 102023 - 102002 - g 72 -7.3 -4.05788 | opp_overlap 102004, overlap 102004 TTTTCTCAAATCAAA GACCACCAA ATGT TTGGTGGTG TAGTTCCTGAAATAG TERM 144 102021 - 102004 - g 86 -9.9 -3.62354 | opp_overlap 102004, overlap 102002 TTCTCAAATCAAAGA CCACCAA ATGT TTGGTGG TGTAGTTCCTGAAAT TERM 145 102004 - 102021 + G 80 -9.9 -2.93901 | opp_overlap 102004 102002 TTCTCAAATCAAAGA CCACCAA ATGT TTGGTGG TGTAGTTCCTGAAAT TERM 146 102096 - 102083 - g 75 -5.3 -4.87786 | opp_overlap 102083 TTAATTTTAGAAAAA GCTTT CCAA AAAGC TTGTCTTACACCCCA TERM 147 102743 - 102729 - g 82 -2.8 -6.09888 | opp_overlap 102729 102730, overlap 102730 CTTTAAGAAAAAAAA TGAAAG AAA CTTTCC TTGATTTAGAAGTAA TERM 148 102742 - 102730 - g 70 -6.3 -4.24306 | opp_overlap 102730 102729, overlap 102729 TTTAAGAAAAAAAAT GAAAG AAA CTTTC CTTGATTTAGAAGTA gcp 101900 - 102886 + | O-sialoglycoprotein endopeptidase-like protein TERM 149 102883 - 102903 + F 93 -7.1 -5.78622 | opp_overlap 102874, overlap 102880 GCCAAATTTAACTTT TTAAAAAAA ATG TTTTTTTAA TTTTTTTTGCGATAA TERM 150 103173 - 103195 + F 93 -5.1 -6.25741 | TTTGCAAACATCCCA TTAAATTAA AAAAC TTAATTTAA TTTTTTTTGTTGTTT TERM 151 104306 - 104280 - f 81 -7.4 -4.76802 | opp_overlap 104279 104283 TTTAAAAACAACAAA GAAGCTATAAGT TGT ATTTACAGCTTC ATAATGTTTATTTCT TERM 152 105483 - 105467 - g 76 -6.7 -4.60487 | opp_overlap 105478 GATTATTGCTAAAAA TAGAAAT GGT ATTTCTA ATAGAAATTATCAAC dnaB 104355 - 105545 + | Replicative DNA helicase TERM 153 105636 - 105611 - f 77 -3.3 -5.75342 | CTCCCCCAAAAAAAA CTAAACTACAT TAAT AAGTAGTTTGG AAAAATGTTGTTTTG TERM 154 106300 - 106321 + F 100 -8.1 -5.47159 | opp_overlap 106300 CTATTTGTTTTAAGA GAAATGCTT TATA AGGCATTTC TTTTTTATATTAAGA TERM 155 106416 - 106406 - f 87 -4 -6.17292 | opp_overlap 106406 AAATTTAAAAAAAAA TCTA ATG TAGA TTTATACAATGATCA infC 106478 - 106912 + | Translation initiation factor IF3 rpmI 107019 - 107216 + | 50S ribosomal protein L35 TERM 156 107531 - 107543 + G 89 -6.3 -5.39755 | GCAGGTTTGGCACAT CTTCA TCC TGAAG TTTTTTCTGATTATG rplT 107231 - 108115 + | 50S ribosomal protein L20 TERM 157 108606 - 108587 - g 73 -4.4 -5.09173 | opp_overlap 108587 GAATATTTCAAAAAA GAAAAAAA CTTA TCTTTTTC TTTATACCTTATTGC PAa_0098 108185 - 108766 + | hypothetical protein acpP 109106 - 109336 + | Acyl carrier protein (ACP) TERM 158 110495 - 110511 + F 77 -8.7 -3.45788 | opp_overlap 110495 110494 110489, overlap 110494 110481 TTCCAATAATAAAAT CATCTGC GTA GCGGATG TATTCTATTCTCGGG TERM 159 110541 - 110574 + F 73 -2.5 -5.76633 | overlap 110546 GTTTGGGTTCAGGTT TAATTTCACTATCTA TTGA TAGATTGTGATGTTG TTTTTTTGTGTATGC TERM 160 110546 - 110569 + F 71 -6.8 -4.04185 | overlap 110541 GGTTCAGGTTTAATT TCACTATCTA TTGA TAGATTGTGA TGTTGTTTTTTTGTG TERM 161 110711 - 110699 - f 86 -7.7 -4.78237 | opp_overlap 110710 TATTTGATAATAAAA GGGAT ATT ATCCC ACCTTGCGGTGTTCC TERM 162 111465 - 111453 - f 74 -9.1 -3.02144 | opp_overlap 111452 111451 111448 TTAGTTTTCCTAAGA GCCCT GGG AGGGC AATTATCATTGTTAT leuS 112526 - 114970 + | Leucyl-tRNA synthetase TERM 163 115219 - 115209 - g 77 -5.4 -5.00467 | TCAACAACAAGAAAA CCTA GAT TAGG CGAACAAGAAGGAAA gmk 115074 - 115712 + | Guanylate kinase rpoZ 115717 - 115923 + | Putative DNA-directed RNA polymerase,omega subunit TERM 164 116134 - 116148 + G 79 -5 -5.38321 | opp_overlap 116134 116135, overlap 116135 TTTATCTATTTTAAA TCATCT CCA AGATGG TTTTTTATACTCTTT mraW 116012 - 116923 + | S-adenosyl-methyltransferase TERM 165 116982 - 116966 - f 79 -3.8 -5.7946 | opp_overlap 116966 116975 TGCTGAATAAAAAAA TAGTTT TTTCC AAACTA CTTATGAATGTAGTT TERM 166 116975 - 117000 + F 100 -9.1 -5.97979 | opp_overlap 116966, overlap 116966 AAAAAATAGTTTTTT CCAAACTACTT ATGA ATGTAGTTTGG TTTTTTTATTCTTAT TERM 167 117139 - 117117 - f 79 -4.9 -5.60993 | TTGGGTACAAAAAAA GACCGACTT AAAAA AAGTCAATC TTAAAGAATTTTTAA PAa_0109 117858 - 118268 + | hypothetical protein TERM 168 118376 - 118405 + F 76 -4.4 -5.44119 | gap 1, opp_overlap 118381, overlap 118381 GTTTAGGGTAGGAAT C-AAAGGCTCTCA GATAA TGAGGGCTTTTAG TTTTTTTAGGGTGCA TERM 169 118381 - 118399 + F 80 -6.7 -4.94243 | opp_overlap 118381, overlap 118376 GGGTAGGAATCAAAG GCTCTCA GATAA TGAGGGC TTTTAGTTTTTTTAG TERM 170 119484 - 119494 + G 76 -4 -5.40072 | TTTAAAGAAGTTTCG CTTT GAT AAAG TTTTTTTGAAAAAAA TERM 171 119524 - 119510 - g 79 -5 -5.40072 | overlap 119512 TTTTTTTGAAAAAAA TCGCTA AAC TAGCAA TACCTGTTTGTGCAA TERM 172 119661 - 119671 + G 71 -2.6 -5.43621 | AGTTTTAGCAGTTAC TATT AAT AATA TTTTTTATAATTTAT norM 118738 - 120204 + | Na+ driven multidrug efflux pump TERM 173 120223 - 120260 + F 77 -6.5 -4.61527 | opp_overlap 120221 120224, overlap 120224 120254 TACTTAAAACAAATA ATTTAAAAAAGAGGCCT GCAA AAGTCTCTTTTTTAAAG TTTTTCAAAACTTTT TERM 174 120259 - 120224 - f 100 -10 -4.44301 | opp_overlap 120224 120223 120254, overlap 120221 ACTTAAAACAAATAA TTTAAAAAAGAGGCCT GCAA AAGTCTCTTTTTTAAA GTTTTTCAAAACTTT TERM 175 120224 - 120259 + F 87 -10 -3.35832 | opp_overlap 120221 120224, overlap 120223 120254 ACTTAAAACAAATAA TTTAAAAAAGAGGCCT GCAA AAGTCTCTTTTTTAAA GTTTTTCAAAACTTT TERM 176 120254 - 120277 + F 79 -4 -5.7946 | opp_overlap 120224 120221 120260, overlap 120224 120223 TGCAAAAGTCTCTTT TTTAAAGTTT TTCA AAACTTTTAA TTTTTTTCTTCAACC TERM 177 120389 - 120371 - f 74 -6.2 -4.65895 | opp_overlap 120375 120377, overlap 120377 TTTTTTATTCAAAAA TTTAAATT TTT AATTTAAA TTAAAAATATTTATA TERM 178 120591 - 120567 - g 71 -4.3 -4.89063 | overlap 120568 CCAGCCAAAAATAAA GTTGCTCTTTT GTC AAAAGCGCAAA GAAAGGTTTCCTTAA TERM 179 120590 - 120568 - g 71 -7.8 -3.52353 | overlap 120567 CAGCCAAAAATAAAG TTGCTCTTTT GTC AAAAGCGCAA AGAAAGGTTTCCTTA PAa_0111 120426 - 121178 + | hypothetical protein TERM 180 123202 - 123182 - g 72 -4.7 -4.99638 | overlap 123183 ATACGGAGACAAAAA CCATGGATA ATT TTTCCATGA AAGGCAACGGTTATC nrdF 122230 - 123264 + | Ribonucleotide reductase, beta subunit mscL 123394 - 123798 + | Putative large-conductance mechanosensitive channel TERM 181 123843 - 123856 + F 77 -3.1 -5.74086 | overlap 123836 AATCCAACAAAAAAA GGCTA TTAA TAGTC TTTTTTATTTACTTT TERM 182 125157 - 125169 + G 70 -6.3 -4.1891 | overlap 125153 CTTTTTATGATGTTT CCAAA AAC TTTGG TTTCTGTTAAAAGAA mdlB 124266 - 125993 + | ABC-type multidrug/protein/lipid transport system, ATPase component TERM 183 126930 - 126965 + G 78 -2.6 -5.80003 | opp_overlap 126941 126942, overlap 126931 126932 TTGGACACATGTCAG TACTTTTACAATCAGC CAAT GCTGCTTCTAAAAGAG TTTTTTCTTTCTTAA PAa_0115 125990 - 127762 + | Putative ABC transporter subunit TERM 184 127833 - 127848 + F 100 -7.6 -6.28401 | opp_overlap 127833 TTTCAATATTAATAA CTAGCT TTCA AGCTAG TTTTTTTATTTTTTA TERM 185 127848 - 127833 - f 73 -7.6 -3.82084 | opp_overlap 127833 TTTCAATATTAATAA CTAGCT TTCA AGCTAG TTTTTTTATTTTTTA TERM 186 129469 - 129447 - f 71 -7.2 -3.97368 | TTTTTAATTTATAAA TGTTTTTCTT GAC AAAAAAAACA AGTATAATGTAGAAC PAa_0116 129593 - 130186 + | hypothetical protein TERM 187 130282 - 130301 + G 100 -7.2 -5.56673 | opp_overlap 130282, overlap 130297 TAATTATCCTTTAAA GACTATCG TTTA TGATAGTC TTTTTTGTTATACAT PAa_0117 130217 - 130360 + | hypothetical protein TERM 188 130755 - 130731 - f 70 -3.7 -5.1285 | AAAAAATAAAACAAA TCCTTTCAT AATAAAA ATAAAAGGA GTAATTAAAATGTTA TERM 189 131227 - 131207 - f 75 -9.1 -3.24747 | TGGTTAGATGATCAA GTTTTAGGA GAA TCCCAAAAC CAAGCTGCCTTTAAT PAa_0118 131472 - 132023 + | hypothetical protein TERM 190 132037 - 132056 + F 100 -7.2 -6.14618 | opp_overlap 132037 AATTTAACCTTTAAA GACTATCG TTTA TGATAGTC TTTTTTTGTTTTATG TERM 191 132710 - 132699 - g 81 -3 -5.88471 | GATGATGAAAAAAAA TTGA TTCC TCAA GGTATTAATAAATCA PAa_0119 132510 - 133430 + | hypothetical protein PAa_0120 133720 - 134424 + | Hemolysin III related protein TERM 192 134617 - 134601 - f 76 -4.5 -5.44119 | opp_overlap 134601 TTGACTTTAAAAAAA TCTTTTA AGA CAAAAGA TTGTGTTTCTTTTAA ackA 134752 - 135942 + | Acetate kinase TERM 193 135983 - 135997 + T 78 -5.8 -5.21459 | overlap 135989 AAAATTCTTTTATGA GTTTTT CAA AAAAAC TTTGTTTTTGTTTTT TERM 194 135989 - 136007 + T 73 -3.2 -5.59357 | overlap 135983 CTTTTATGAGTTTTT CAAAAAAA CTT TGTTTTTG TTTTTTTGGTGTGAT PAa_0122 136833 - 136630 - | hypothetical protein TERM 195 139192 - 139182 - g 71 -2.6 -5.40464 | opp_overlap 139182 139183, overlap 139183 GATTACAAATAAAAA TTTT CAA AAAA CTTTTGAGATTGCCT priA 137056 - 139419 + | Primosomal protein N TERM 196 139629 - 139651 + F 77 -3.4 -5.67063 | TTTTAAAAAAATTAA GATTGACTTA TTT TTAGTCGGTC TTTTTTTGTACTCAA TERM 197 140020 - 140050 + F 73 -2 -5.75945 | overlap 140030 GTAAAATCCTAAATT TTGAAATTACTTAA ATA TTAATTAATATCGA TTTTTTTTAAGAAAT TERM 198 140351 - 140328 - f 100 -7.5 -5.40474 | opp_overlap 140328, overlap 140295 ATGGCGTCAAAAAAA TCACCCTTG AGTTTA CAAAGGTGA TTAAGTTTTTCAATT TERM 199 140624 - 140644 + F 70 -6.3 -4.28488 | opp_overlap 140629, overlap 140626 TAACCCATTTATTGA TATAATTAC GAT GTAATTATG TTTATATATTTAAAT TERM 200 141042 - 141056 + G 76 -4.3 -5.24129 | opp_overlap 141032 AACCACTCCTTTAAT TCAAG GAACA CTTGA TTTTTTATCCCAAAG PAa_0124 140839 - 141360 + | hypothetical protein TERM 201 141384 - 141437 + F 85 -10.1 -3.29385 | gap 1, opp_overlap 141384 AAAGTCAATGAGTAA TTTTTTAAGTCTTTCAAAAGAATTGA ACC TCAGTT-TTTTGCGGGACTTAAAAAA TTACTCATTGACTTT TERM 202 141591 - 141601 + F 73 -2.6 -5.73563 | GATTCAAATACCCAC TAAA TGC TTTA TTTTTTTGATTTCCT TERM 203 141897 - 141916 + F 70 -5.2 -4.84359 | CTTATTTTTAGTTAG TTTTTTTA AGAT TAAAAAAA TTTTTCTAGAAATAA PAa_0125 141961 - 142194 + | hypothetical protein PAa_0126 143923 - 142979 - | Putative phage integrase TERM 204 143994 - 144022 + r 95 -10.7 -4.26351 | opp_overlap 143994 ATTATAACTCAAAAA TATATTTTAAAAT TTA ATTTTAAAATATA TTTATTAAATTACTA TERM 205 144022 - 143994 - R 100 -10.7 -4.78752 | opp_overlap 143994 ATTATAACTCAAAAA TATATTTTAAAAT TTA ATTTTAAAATATA TTTATTAAATTACTA TERM 206 144051 - 144080 + r 82 -9.7 -3.33605 | opp_overlap 144040 144048 144045 144043 144053, overlap 144038 144040 144045 TATATAATATGATTA TATTATTTATTTA AGAT TAAATAAATAATA TTAATGATTATGTTT TERM 207 144135 - 144176 + r 100 -12.5 -4.19735 | opp_overlap 144137, overlap 144137 144150 TCATTACTCATCACA AACCAATTCAAAACAGCCT TGGA GGGCTTTTTTGAATTGGTG TTTAGTTTTACCCAC TERM 208 144174 - 144137 - R 100 -14.4 -3.98214 | opp_overlap 144137 144135 144150 ATTACTCATCACAAA CCAATTCAAAACAGCC TTGGAG GGCTTTTTTGAATTGG TGTTTAGTTTTACCC TERM 209 144137 - 144174 + r 100 -15.1 -3.695 | opp_overlap 144137, overlap 144135 144150 ATTACTCATCACAAA CCAATTCAAAACAGCCT TGGA GGGCTTTTTTGAATTGG TGTTTAGTTTTACCC TERM 210 144150 - 144161 + r 70 -3.6 -5.17576 | opp_overlap 144137, overlap 144137 144135 AACCAATTCAAAACA GCCT TGGA GGGC TTTTTTGAATTGGTG TERM 211 144418 - 144396 - R 100 -10.5 -5.80003 | opp_overlap 144397, overlap 144397 GGAAGAAATAAAAAA CCCCCCCTC TAGTT GAGGGGGGT TATAAATTAGATTGA TERM 212 144397 - 144417 + r 100 -14 -3.43564 | opp_overlap 144396 144397 GAAGAAATAAAAAAC CCCCCCTC TAGTT GAGGGGGG TTATAAATTAGATTG TERM 213 144417 - 144397 - R 100 -14 -4.05561 | opp_overlap 144397, overlap 144396 GAAGAAATAAAAAAC CCCCCCTC TAGTT GAGGGGGG TTATAAATTAGATTG TERM 214 144951 - 144897 - R 100 -17.8 -3.27259 | opp_overlap 144899 144905 144909 144913, overlap 144899 144905 144909 144913 CATATATATGATTAA TATATAAAGAAAGAAATAAAAACTAT TTA AAAGTTTTTATTTCTTTCTTTATATT ACATATACATATATT TERM 215 144949 - 144899 - R 100 -20.4 -3.19563 | opp_overlap 144899 144905 144909 144913, overlap 144897 144905 144909 144913 TATATATGATTAATA TATAAAGAAAGAAATAAAAACTAT TTA AAAGTTTTTATTTCTTTCTTTATA TTACATATACATATA TERM 216 144899 - 144949 + r 100 -20.4 -3.14026 | opp_overlap 144899 144897 144905 144909 144913, overlap 144905 144909 144913 TATATATGATTAATA TATAAAGAAAGAAATAAAAACTAT TTA AAAGTTTTTATTTCTTTCTTTATA TTACATATACATATA TERM 217 144943 - 144905 - R 100 -15 -4.22927 | opp_overlap 144899 144905 144909 144913, overlap 144899 144897 144909 144913 TGATTAATATATAAA GAAAGAAATAAAAACTAT TTA AAAGTTTTTATTTCTTTC TTTATATTACATATA TERM 218 144905 - 144943 + r 100 -15 -4.22678 | opp_overlap 144905 144899 144897 144909 144913, overlap 144899 144909 144913 TGATTAATATATAAA GAAAGAAATAAAAACTAT TTA AAAGTTTTTATTTCTTTC TTTATATTACATATA TERM 219 144939 - 144909 - R 100 -10 -4.68132 | opp_overlap 144905 144899 144909 144913, overlap 144905 144899 144897 144913 TAATATATAAAGAAA GAAATAAAAACTAT TTA AAAGTTTTTATTTC TTTCTTTATATTACA TERM 220 144909 - 144939 + r 100 -10 -4.68511 | opp_overlap 144909 144905 144899 144897 144913, overlap 144905 144899 144913 TAATATATAAAGAAA GAAATAAAAACTAT TTA AAAGTTTTTATTTC TTTCTTTATATTACA TERM 221 144935 - 144913 - R 70 -5 -4.84602 | opp_overlap 144909 144905 144899 144913, overlap 144909 144905 144899 144897 ATATAAAGAAAGAAA TAAAAACTAT TTA AAAGTTTTTA TTTCTTTCTTTATAT TERM 222 144913 - 144935 + r 70 -5 -4.84602 | opp_overlap 144913 144909 144905 144899 144897, overlap 144909 144905 144899 ATATAAAGAAAGAAA TAAAAACTAT TTA AAAGTTTTTA TTTCTTTCTTTATAT TERM 223 144988 - 145008 + r 73 -2.7 -5.7946 | overlap 144995 TTAAAATATTATTAC TTTATACTT ATA AAATATAAA TTTTTTTCTTCAAAA PAa_0127 145557 - 145183 - | RNA polymerase sigma factor TERM 224 145645 - 145626 - R 86 -5.8 -5.79595 | overlap 145635 CTTGAAAAGAAAAAA GACTAACT ATTA AGTTAATC TTAAAGAATTTTTAA TERM 225 145810 - 145822 + r 73 -3.5 -5.52807 | TTTAACAAAGCTTTC TTAAA AAA TTTAA TTTTTGTTTGTTATT metG 147406 - 145853 - | Methionyl-tRNA synthetase TERM 226 146819 - 146835 + g 82 -5.3 -5.39407 | overlap 146817 ATCATTTAACGGTTC TTTTAAA AGA TTTAAAA TTTCTTTTTTTTGTG TERM 227 148392 - 148377 - R 100 -6.2 -6.22691 | opp_overlap 148376 TAATAATAAAAAAAA GCTATT TTTA AATAGC CTTAAGTTTTAACAA pepA 149925 - 148444 - | Leucyl aminopeptidase TERM 228 150862 - 150844 - g 83 -7.6 -4.71426 | overlap 150853 TTTTTAGGAAGAAAA GATAAAAA AGG TTTTTATC AAAATCCCTCGCATT TERM 229 150869 - 150853 - g 79 -3.7 -5.65678 | overlap 150844 AGAAAAGATAAAAAA GGTTTTT ATC AAAATCC CTCGCATTCACCTAC PAa_0130 150511 - 150903 + | hypothetical protein TERM 230 150995 - 150951 - T 81 -7.4 -4.74504 | opp_overlap 150951 ATTCTAAGCCAAAAA CAAGTTTCAAGTTTAGTAAA TTCAT TTTACTATACGCAAAACTTG TTTTTTTTATTTTGT TERM 231 150951 - 150995 + T 86 -3 -6.37666 | opp_overlap 150951 ATTCTAAGCCAAAAA CAAGTTTCAAGTTTAGTAAA TTCAT TTTACTATACGCAAAACTTG TTTTTTTTATTTTGT PAa_0131 151493 - 151218 - | hypothetical protein TERM 232 151833 - 151872 + r 71 -8.2 -3.08991 | opp_overlap 151833 151856, overlap 151832 CATAATTTCTAAATA GTTTTTTTTATCTTAAGT AAAT ATTTAAGATAAAATGAAC CTTTATTCAAAAACT TERM 233 152003 - 151988 - R 80 -6.2 -5.18715 | opp_overlap 151987, overlap 151980 AGAAAAATAATAAAA TGCATT TATT AATGCA AAATTTCTCTCTTTT TERM 234 152101 - 152117 + r 71 -6.7 -4.17701 | AAACTTAATTTTTCG CTTATTT GTA AAATAAG TTTATCGTTTGTAAG TERM 235 152170 - 152200 + r 87 -7.2 -5.11937 | opp_overlap 152186 152188, overlap 152188 152189 GAATTGATTTTTTAT TTATTTTTTTAAAT TAT ATTTCAAAAAATAA TTTTTTGAACTTATT TERM 236 152387 - 152360 - R 87 -6.4 -5.34632 | opp_overlap 152365, overlap 152365 AATAAAACAGAAAAA CAAAAGAGACCT ACAA AAGTCTCTTTTT TTTATGTAATTTTGT TERM 237 152365 - 152382 + r 86 -4.1 -6.0427 | opp_overlap 152360 152365 AACAGAAAAACAAAA GAGACCT ACAA AAGTCTC TTTTTTTTATGTAAT TERM 238 152382 - 152365 - R 83 -6.3 -5.40873 | opp_overlap 152365, overlap 152360 AACAGAAAAACAAAA GAGACCT ACAA AAGTCTC TTTTTTTTATGTAAT potD 153567 - 152524 - | ABC-type spermidine/putrescine-binding periplasmic protein potC 154511 - 153705 - | ABC-type spermidine/putrescine transport system, permease component II TERM 239 153989 - 153979 - G 72 -6.8 -4.17491 | ATTAAAGCTTTAAAA GGAG TTG CTCC TAAATCATAAGCCGC potB 155337 - 154501 - | ABC-type spermidine/putrescine transport system, permease component I potA 156587 - 155334 - | ABC-type spermidine/putrescine transport systems, ATPase component TERM 240 155616 - 155602 - G 70 -5.8 -4.43477 | TCCACGCAATTAAAA TTTTGA CCA TCAAAA TAAACTAAACTATCT TERM 241 156021 - 156040 + g 70 -3 -5.21459 | CATGATTTTTAAATA TTTAAAAA CATC TTTTTGAA TTTCTTTTTCTTTTT TERM 242 157471 - 157483 + H 70 -2.7 -5.61824 | ATCATAAAAAATTAT TTTAC TTA GTAGA TTTTTTTAAATTTTG TERM 243 157997 - 157962 - g 72 -4.8 -4.99435 | overlap 157963 TTGAAGAAGTAAAAA CCCCCCCCAATAAATC GCAA AATTTATCAAGAGGGA TTTTATTATATGGCC TERM 244 158595 - 158577 - g 78 -8.2 -4.01369 | AAGAAGCTAAAAAGA GATTGTCG CTT CAACAATC AGATGGAGAAAAAAT TERM 245 158622 - 158610 - g 72 -3.5 -5.29782 | CAGATGGAGAAAAAA TAAAT ATT ATTTA TGAGGCTATGGATTC PAa_0136 157496 - 159247 + | Putative peptidase TERM 246 160078 - 160098 + G 76 -8.5 -3.53091 | opp_overlap 160091 AGCTGTCTTTTTTTA GATTTTAAT ACA ATTAAAATC TTTAAGAACAACAAT TERM 247 160164 - 160182 + G 82 -4.6 -5.60993 | opp_overlap 160164 160162 TTTCAAGGATAAACA CACAAAAA TTT TTTTCGTG TTTTTTTGTAACGCC PAa_0137 160051 - 160314 + | hypothetical protein TERM 248 160307 - 160327 + F 77 -7.1 -4.41528 | overlap 160305 160320 GTTTTGGCCTATATT TTTTTTAAT GCT ATTAAAAAA TGTTTTTTTAGGTTT TERM 249 160684 - 160702 + F 100 -8.2 -5.52986 | opp_overlap 160684 TAATTAATAAATTAA GACTGACT TTT AGTTAGTC TTTTTTTCATCACAT TERM 250 161152 - 161126 - g 75 -5.3 -4.85433 | AGATAAACTTAAAAA CTAATCCTTCA GATAA TAAAGAATTAG AATTGCAAAAGAAAC PAa_0138 160972 - 163845 + | hypothetical protein TERM 251 164166 - 164182 + T 73 -2.3 -5.72118 | TTTTTTTATTTAAGT GAAAATA TTA TATTTGC TTTTTTATATTTTTT TERM 252 164315 - 164290 - T 85 -3.3 -6.32976 | overlap 164291 AAAAAAACAAAAAAA CCAAACTACGT TTAC AAGCAGTTTGA AAAAATATTATTTTG TERM 253 164904 - 164925 + T 72 -3.7 -5.40072 | opp_overlap 164904 TTGATTTTAAATAAC CCCCTTT TCTAATTT GAAGGGG TTTTTTTGACAAAAG cbiQ 165760 - 164912 - | ABC-type cobalt transport system,permease protein TERM 254 165723 - 165749 + g 70 -5.4 -4.5287 | TGGTAAATAAAATTT TTTTGTTTTTGA TAT TTAAAAATAAAA TTTTGATTCATTTAA cbiO1 167436 - 165757 - | ABC-type cobalt transport system, ATP-binding protein PAa_0141 168452 - 167871 - | Conserved hypothetical protein (DUF1393) TERM 255 169120 - 169139 + r 100 -8.6 -5.67063 | opp_overlap 169119 GAAAAAAAAATTTAG GACCAACT TTTT GGTTGGTC TTTTTTTGTGATCAA TERM 256 169202 - 169186 - R 77 -6.7 -4.56775 | ATTCTTTTCTAAAAA CATTTTT AGA AAAAATG GGGACCCAATTTTTA TERM 257 169344 - 169301 - R 70 -3.4 -5.42605 | opp_overlap 169330 CTAACAAAAACAAAA TTAATTCAACCAAAAAACCA TCTA TAAGTTTTTGGTAAAATTAA TTTATTTTTTTATAT valS 171940 - 169370 - | Valyl-tRNA synthetase TERM 258 171573 - 171583 + g 74 -4 -5.28942 | CATTGGTTGCGAATG TTTG TGG CAAA TTTTTCTTTCCACTC TERM 259 171633 - 171647 + g 73 -2.9 -5.55855 | overlap 171620 GTGGCTTTATCTAAG TCTTT ATTTA AAAGA TTTTCTTTTTTTAAG engB 172599 - 172021 - | GTP-binding protein TERM 260 172573 - 172587 + g 70 -5 -4.69664 | GATGTTTTCAATGCT GCGAAT AAA ATTTGC TTTTTGAATCATATG PAa_0144 172797 - 172615 - | hypothetical protein TERM 261 173189 - 173166 - H 78 -9.7 -3.10761 | overlap 173171 ATTGTAATATATATA GCTAATCCA TTTTTG TGGATTAGC CAAACCTTGCATCTT TERM 262 173417 - 173428 + H 73 -3 -5.65927 | opp_overlap 173410 173417, overlap 173410 ACCAAAACTAAAAAT TATC GAAT GATA TTTTTTATTTACATC holA 174078 - 175040 + | DNA polymerase III, delta subunit sua5 175601 - 175035 - | Translation factor prfA 176658 - 175594 - | Protein chain release factor A TERM 263 176408 - 176418 + g 80 -4 -5.61881 | ACTTTTTTTTGTTGT GAAA GCG TTTC TTTTTCTTTTTGAGC dnaC 178073 - 176730 - | Replicative DNA helicase TERM 264 177498 - 177474 - G 74 -6.5 -4.57882 | opp_overlap 177474 177476, overlap 177476 TGCAATAATAATAAA TTCTTCAGGTT TCA AACCTAAAGTA ATGTTGTCAAGATTT TERM 265 177496 - 177476 - G 73 -9.1 -2.59102 | opp_overlap 177476 177474, overlap 177474 CAATAATAATAAATT CTTCAGGTT TCA AACCTAAAG TAATGTTGTCAAGAT PAa_0149 180568 - 178070 - | Exopolyphosphatase-related protein TERM 266 178171 - 178182 + g 73 -3 -5.44119 | CAGAAGTAATTTCAT TTTC CAAG GAAA TTTTTTTACGATCAA TERM 267 180663 - 180650 - R 86 -3.8 -6.15536 | opp_overlap 180644 180641 180650 AATTAATAAAAAAAA CAGG ATTACG CCTG TTTTTATTGTTGAAT TERM 268 180650 - 180663 + r 72 -3.8 -5.30348 | opp_overlap 180650, overlap 180644 180641 AATTAATAAAAAAAA CAGG ATTACG CCTG TTTTTATTGTTGAAT rpsR 180903 - 180667 - | 30S ribosomal protein S18 TERM 269 180853 - 180828 - G 71 -7.8 -3.51708 | overlap 180824 TATCTTTGAAATCAA TTTTACTGAA TTTGTT TTCAGTAAAA TAACAAACTTTGCGA TERM 270 180867 - 180887 + g 79 -3.3 -5.66926 | overlap 180870 AATAACAAACTTTGC GACGTTTTT TGA AAACATGTC TTTTATTTTTTTTCA ssb 181361 - 180927 - | Single-stranded DNA-binding protein rpsF 181769 - 181488 - | 30S ribosomal protein S6 TERM 271 182466 - 182450 - g 74 -6.6 -4.2828 | TCCCAGTGAGGAAAA CAAGCA GAAAT TGCTTG AGGCTGCTAAAAAAT PAa_0153 182235 - 182573 + | hypothetical protein PAa_0154 182702 - 183595 + | hypothetical protein TERM 272 184033 - 184045 + T 73 -2.7 -5.79595 | ATACTGGAGAGATGA TGTTT TTT AGACA TTTTTTGTTTTAAAA TERM 273 184169 - 184191 + T 100 -7 -6.20267 | opp_overlap 184169 TTTTTAAAAAATTAA GACTGACTTA TTT TTAGTCGGTC TTTTTTTCTTTTTAA TERM 274 184706 - 184694 - T 73 -2.7 -5.79595 | TTTTAAAACAAAAAA TGTCT AAA AAACA TCATCTCCCCAGATT TERM 275 184798 - 184785 - T 76 -5.9 -4.86216 | opp_overlap 184785 ACAAAAAATAATAAA GGCCC ACAA AGGCC TTTTCTTTTATCTTT TERM 276 184785 - 184798 + T 77 -5.2 -5.2894 | opp_overlap 184785 ACAAAAAATAATAAA GGCC CACAAA GGCC TTTTCTTTTATCTTT PAa_0155 186510 - 184816 - | DEAD/DEAH box helicase-like TERM 277 185358 - 185376 + g 73 -3.2 -5.46129 | CTATTACTTTTTGTT CAAAGTTT TCC AAAATTTG TTTTTTGATTTCTTC TERM 278 187183 - 187161 - R 91 -4.9 -6.0427 | opp_overlap 187161 AGCATATAAAAAAAA GAGCCTA AGGAAAATA TAGGCTC TTTTGAGAGGGGTTT PAa_0156 188246 - 187197 - | hypothetical protein PAa_0157 188898 - 189131 + | hypothetical protein PAa_0158 189286 - 189981 + | hypothetical protein TERM 279 190135 - 190116 - T 74 -5.2 -5.22312 | overlap 190125 190127 ATTGATATTAAAAAA TTAAAAAA ATAT TTTTTTAA AACAAAACACCCTTA TERM 280 190139 - 190125 - T 76 -2.2 -5.88061 | overlap 190116 190127 AAAAAATTAAAAAAA TATTTT TTT AAAACA AAACACCCTTAAGTC PAa_0159 191395 - 190739 - | hypothetical protein TERM 281 190834 - 190811 - G 95 -3.9 -6.14618 | opp_overlap 190811 GAGAAAAGAAAAAAA GAGCCTA AGGAAAGAAA TAGGCTC TTTGGTTGGGAATAA TERM 282 190882 - 190863 - G 100 -9.4 -5.63504 | opp_overlap 190865 AAGGGTATAAAAAAA GACCTATT GGGT AATAGGTC TAGTAGGGAATTGAA PAa_0160 191776 - 191546 - | hypothetical protein PAa_0161 192311 - 191934 - | hypothetical protein TERM 283 192245 - 192226 - G 100 -7.9 -5.92399 | opp_overlap 192226 GAAGAAAAGAAAAAA GAGCCTA GGGAAA TAGGCTC TTTGGGTGGAAATAA TERM 284 192226 - 192245 + g 71 -7.9 -3.65351 | opp_overlap 192226 GAAGAAAAGAAAAAA GAGCCTA GGGAAA TAGGCTC TTTGGGTGGAAATAA TERM 285 192293 - 192274 - G 79 -3.6 -5.63504 | overlap 192276 AAGGGTATAAAAAAA GACCTATT GGGT AATAGGTT GAAAATAAAAGAGAT TERM 286 192291 - 192276 - G 74 -6.2 -4.45201 | overlap 192274 GGGTATAAAAAAAGA CCTATT GGGT AATAGG TTGAAAATAAAAGAG PAa_0162 193001 - 192474 - | hypothetical protein PAa_0163 193759 - 193433 - | hypothetical protein TERM 287 193692 - 193723 + g 80 -3.8 -5.60993 | opp_overlap 193692 CCCTTTCTGATGAAA CATAATGGGATAAA ATTA TTTCCCCTATTATG TTTTTTTGTAAAAGA TERM 288 194297 - 194307 + H 72 -4 -5.44119 | TGGTCGAAAAAACTT TGAA ATA TTCA TTTTTTTCAAATCAA pfkA 194757 - 195731 + | 6-phosphofructokinase TERM 289 198334 - 198344 + G 70 -5.4 -4.60886 | ATAATTTTACGTTAT GAAG GAA CTTC TTTATTTACTTCTGT norM 197185 - 198630 + | Na+-driven multidrug efflux pump pgi 198665 - 199948 + | Glucose-6-phosphate isomerase TERM 290 199982 - 200001 + T 100 -8.6 -5.60993 | opp_overlap 199982 199985, overlap 199998 AAATTTAATTTTAAA GATCGACT TTTT AGTCGGTC TTTTTTTATAAAAAA TERM 291 200315 - 200338 + T 100 -9.6 -6.09196 | opp_overlap 200314 200312 200315, overlap 200317 TTTTAAAAAAATGAT GCCCGACTTA TTTT TAAGTCGGTC TTTTTTTCTTTTGGA TERM 292 200338 - 200315 - T 75 -9.6 -2.69257 | opp_overlap 200315 200317, overlap 200314 200312 TTTTAAAAAAATGAT GCCCGACTTA TTTT TAAGTCGGTC TTTTTTTCTTTTGGA TERM 293 200317 - 200336 + T 100 -10.8 -4.67109 | opp_overlap 200315 200314 200312, overlap 200315 TTAAAAAAATGATGC CCGACTTA TTTT TAAGTCGG TCTTTTTTTCTTTTG TERM 294 200403 - 200390 - T 71 -5.3 -4.59511 | AATATTTTCTAAAAA CGTTT TGAT AAACG GATAAAATATTTAAG PAa_0167 202219 - 201350 - | Putative methyltransferase TERM 295 202004 - 202029 + g 77 -4.9 -5.20756 | TTGAGGTAACCTATT TTTCTGATTAT GTTG ATAATAAGAAA TTATTTTTTTTTTAA TERM 296 202183 - 202200 + g 86 -7.1 -5.15634 | CTAAATACAAAGTCG GTTTTTG ATTG CAAAAAC TTTTTTGGTGAAATA holB 203192 - 202245 - | DNA polymerase III, delta prime subunit TERM 297 202813 - 202798 - G 75 -3.3 -5.4505 | TCTGTCAACAAAAAA CCAAT TATATT ATTGG GAGTATTTTCTAAAA TERM 298 202911 - 202889 - G 81 -8.6 -4.1347 | opp_overlap 202889 202888, overlap 202905 CTTCAATCACATAAA TTCTTTGTTC TCC AAACAAAGAA CTTTGACTAAAAAAA tmk 203800 - 203171 - | Thymidylate kinase TERM 299 203686 - 203676 - G 82 -5.4 -5.42605 | CTAATAAAAAGAAAA GGAT GAT ATCC TCCCGGTTCCTTGGT TERM 300 203912 - 203900 - R 73 -3.5 -5.5074 | overlap 203888 TAATTTAATAAAAAA TTTTT TTT AAAAA TAAACCTTTCGCTGG truA 204626 - 203889 - | tRNA pseudouridine synthase A TERM 301 204119 - 204129 + g 87 -2.6 -6.28401 | opp_overlap 204119 AAGCATTTAAAACAG TTTT ATT AAAA TTTTTTTCTTTTTTG TERM 302 205491 - 205503 + r 70 -3.5 -5.29846 | TTTTTTTAATCCCTT TAATT GTA AATTA TTTTTGTTTAAAGTT TERM 303 205879 - 205867 - R 80 -2.7 -6.09196 | TTTAAAACAAAAAAA TGTCT AAA AAACA TCATCTCCCCACACC TERM 304 205952 - 205930 - R 80 -3.5 -5.82281 | opp_overlap 205930 205933, overlap 205933 AAATATATAAAAAAA GAAGCTAAA TTATC TTTAGCTTA TTTTTCGTTTAATTT TERM 305 205949 - 205933 - R 72 -5.2 -4.92669 | opp_overlap 205933 205930, overlap 205930 TATATAAAAAAAGAA GCTAAA TTATC TTTAGC TTATTTTTCGTTTAA norM 207435 - 205945 - | Na+-driven multidrug efflux pump TERM 306 206667 - 206679 + g 71 -2.7 -5.44721 | overlap 206668 TTTTCAAAAAACGTT TTTCA AAG TGAAG TTTTTTTAAAATAAT TERM 307 208009 - 208031 + r 91 -7 -5.60993 | TTAAAAAAAATTTGG GACTGACTTA TTT TTAGTCGGTC TTTTTTTGTACCCAA TERM 308 208626 - 208606 - R 76 -2.7 -5.95539 | opp_overlap 208609, overlap 208598 208609 TGTTAAACAAAAAAA TAATATTTT TTT AAAATATTT TATTAACTAAAGGTG TERM 309 208623 - 208609 - R 70 -4.4 -5.01858 | opp_overlap 208609, overlap 208598 208606 TAAACAAAAAAATAA TATTTT TTT AAAATA TTTTATTAACTAAAG TERM 310 208957 - 208980 + r 78 -4.5 -5.5112 | opp_overlap 208959, overlap 208959 AAAAAGATATTTTAA AAGCCCTCG TTAGTT TGAGGGCTG TTTTTTCTTACTCAA TERM 311 208959 - 208978 + r 77 -7.1 -4.39002 | opp_overlap 208959, overlap 208957 AAAGATATTTTAAAA GCCCTCG TTAGTT TGAGGGC TGTTTTTTCTTACTC TERM 312 208978 - 208959 - R 73 -6.4 -4.20074 | opp_overlap 208959 208957 AAAGATATTTTAAAA GCCCTC GTTAGTTT GAGGGC TGTTTTTTCTTACTC glyA 210317 - 209076 - | Serine hydroxymethyltransferase cbiQ 211298 - 210351 - | ABC-type cobalt transport system,permease component cbiO2 212165 - 211311 - | ABC-type Cobalt import ATP-binding protein CbiO 2 cbiO2 212947 - 212141 - | ABC-type cobalt import ATP-binding protein cbiO 2 TERM 313 212490 - 212521 + g 81 -8.8 -4.09508 | AAAACAATAATGTTT GTTTCCATTGCC AAAATGGA GGCAATGGCAAC TCTTTGTTTTTGTCC PAa_0176 214692 - 213004 - | Oligoendopeptidase F TERM 314 214629 - 214641 + g 77 -7.7 -4.20136 | ACGATTCAATCATCG GAGCA ACT TGCTC TTTGATTTTGGGAAT PAa_0177 215329 - 214712 - | hypothetical protein PAa_0178 216015 - 215350 - | hypothetical protein TERM 315 216241 - 216231 - H 70 -2.6 -5.52384 | opp_overlap 216231, overlap 216232 CTTGCAGTAAAAAAA TTAA TTT TTAA AATTAGCTTGTTGCT TERM 316 216496 - 216480 - H 75 -6.7 -4.48175 | opp_overlap 216479, overlap 216469 AAAATTTAATTAAAA CTTTTTA AAT TAAAAAG AATATATTTAATGGT TERM 317 216642 - 216624 - H 70 -4.7 -4.88736 | overlap 216609 216638 CATTATTCAGAAAAA TGAAATT ATGAA AATTTCA ACATTTAAAACGAGT TERM 318 216678 - 216690 + H 70 -3.5 -5.32608 | overlap 216684 ATAAGCCTATCCTAA TTTTT CTT AAAAA TTTTTTAAATTTTTT TERM 319 216751 - 216768 + H 73 -2.1 -5.76949 | gap 1, opp_overlap 216751 216754, overlap 216754 GTTATTTCATAAAAA TCAT-AGA TAT TCTAATGA TTTTTTTTGAAAATA TERM 320 217387 - 217333 - H 100 -17.8 -3.66541 | opp_overlap 217335 217341 217345 217349, overlap 217320 217335 217341 217345 217349 AATATATATGGTAAA TATATAAAGAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTCTTTATATT ACATATACATATATT TERM 321 217335 - 217385 + H 100 -20.4 -3.14026 | opp_overlap 217320 217333 217335 217341 217345 217349, overlap 217341 217345 217349 TATATATGGTAAATA TATAAAGAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTCTTTATA TTACATATACATATA TERM 322 217385 - 217335 - H 100 -20.4 -3.40558 | opp_overlap 217335 217341 217345 217349, overlap 217320 217333 217341 217345 217349 TATATATGGTAAATA TATAAAGAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTCTTTATA TTACATATACATATA TERM 323 217341 - 217379 + H 100 -15 -4.22678 | opp_overlap 217335 217333 217341 217345 217349, overlap 217335 217345 217349 TGGTAAATATATAAA GAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTC TTTATATTACATATA TERM 324 217379 - 217341 - H 100 -15 -4.27886 | opp_overlap 217341 217335 217345 217349, overlap 217335 217333 217345 217349 TGGTAAATATATAAA GAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTC TTTATATTACATATA TERM 325 217345 - 217375 + H 100 -10 -4.68511 | opp_overlap 217341 217335 217333 217345 217349, overlap 217341 217335 217349 AAATATATAAAGAAA GAAATAAAAACTTT TGA ATAGTTTTTATTTC TTTCTTTATATTACA TERM 326 217375 - 217345 - H 100 -10 -4.69487 | opp_overlap 217345 217341 217335 217349, overlap 217341 217335 217333 217349 AAATATATAAAGAAA GAAATAAAAACTTT TGA ATAGTTTTTATTTC TTTCTTTATATTACA TERM 327 217349 - 217371 + H 70 -5 -4.84602 | opp_overlap 217345 217341 217335 217333 217349, overlap 217345 217341 217335 ATATAAAGAAAGAAA TAAAAACTTT TGA ATAGTTTTTA TTTCTTTCTTTATAT TERM 328 217371 - 217349 - H 70 -5 -4.84602 | opp_overlap 217349 217345 217341 217335, overlap 217345 217341 217335 217333 ATATAAAGAAAGAAA TAAAAACTTT TGA ATAGTTTTTA TTTCTTTCTTTATAT TERM 329 217480 - 217466 - H 72 -5 -5.00616 | TTTTTCTTCAAAAAA CCAATT AAA AACTGG TACTGGTTGAGAACA PAa_0179 217613 - 218095 + | hypothetical protein TERM 330 218318 - 218332 + F 86 -5.8 -5.63504 | opp_overlap 218317 218318 218320 AAAAAAATAATACAT CATTTT TGT AAAATG TTTTTTTCTGCGATT TERM 331 218433 - 218452 + F 73 -3.5 -5.55855 | opp_overlap 218433, overlap 218435 AAAGAATAACTTAAA GCCCTCA TTAGTT TGAGGAC TTTTCTTTTTTTCCA TERM 332 218948 - 218961 + F 73 -3.1 -5.62288 | opp_overlap 218948, overlap 218942 218937 ATGATAAAATAAGGA GGAAG GTTA TTTCC TTTTTATTTTGTTGC TERM 333 219318 - 219308 - f 70 -2.6 -5.59564 | AGAAATCCAAAAAAA TTAA GTA TTAA GAAAATGAAAAAAAA PAa_0180 219523 - 219876 + | hypothetical protein TERM 334 219870 - 219852 - f 70 -3.2 -5.41746 | overlap 219863 AATGGTTCAAAAAAA TCTTATAA CAT TTTTAAGA AAATAAGATTAAGTA TERM 335 219946 - 219921 - f 75 -9.3 -2.7419 | overlap 219937 ATATTATTGCAATTA TTTCTAAAAAA ATAT TTTTTTAGAAA AGAGTGGAAAAATCT TERM 336 220052 - 220029 - f 100 -6 -6.4275 | TAAAAAGAAAAAAAA GACCGACTAA AAAA TAAGTCAGTC CCAAATTTTTTTTAG PAa_0181 220400 - 220597 + | hypothetical protein TERM 337 221203 - 221215 + T 74 -9.1 -3.02144 | opp_overlap 221202 221201 221198 ATAACAATGATAATT GCCCT CCC AGGGC TCTTAGGAAAACTAA TERM 338 221666 - 221680 + T 70 -4.4 -4.94487 | overlap 221679 CAGTTTTCTAATTGC TTTTTT AAG AAAAAA TTTTATATTTTATAC TERM 339 221710 - 221681 - T 100 -9.7 -5.4505 | opp_overlap 221679, overlap 221704 221706 TTTTTTAAGAAAAAA TTTTATATTTTAT ACTT ATAAAATATAAAA AAATAATTTTTTTAC TERM 340 223161 - 223171 + T 70 -4 -5.20328 | GCTCATTTCTGTTTT GTTA ACA TAAC TTTATTTTTTTAAGC TERM 341 223236 - 223263 + T 78 -4.4 -5.46629 | gap 1, opp_overlap 223236 AATAATTGAAAAAAA CAATAAAATCTTT TAA GAAG-TTTTATTG TTTTTTTAAAATATT TERM 342 223263 - 223236 - T 75 -3.7 -5.57054 | gap 1, opp_overlap 223236 AATAATTGAAAAAAA CAATAAAATCTT TTAAG AAG-TTTTATTG TTTTTTTAAAATATT PAa_0185 223667 - 223302 - | hypothetical protein PAa_0186 224780 - 223698 - | hypothetical protein TERM 343 224868 - 224839 - R 75 -8.8 -3.25072 | gap 1, overlap 224834 TGTATCATAATCCAA TCTGGTAATGCAA AAAAA TTGCATTACC-GA CCAAACCATGTTTTA TERM 344 226472 - 226490 + r 100 -7.5 -5.31545 | TAATTTGTAATTTGT CTTTGGA TTTCT TCCAAAG TTTTTTCATGTTGTT TERM 345 228489 - 228519 + r 78 -8.6 -3.98745 | TTTGTTTTGTTGATA TTCAAAATTTAAAT ACC ATTTCAATTTTGAA TTATTTGGGTCGTTG TERM 346 229346 - 229381 + r 70 -7 -3.76815 | gap 1, opp_overlap 229355 229363, overlap 229347 GTGTCAATTACTTCA TCCAAATCA-GAAGGCA ACA TGACTTCATGGTTTGGG TTTAGGGTTTTGAAT TERM 347 230122 - 230140 + r 73 -6.8 -4.29621 | overlap 230119 GTTTTTTGGTTGCTT CAATTTCA TTT TGAAGTTG TTTAATTTGTTTATC TERM 348 230446 - 230464 + r 73 -6.8 -4.20888 | CATTGATTTGTTCGC GTTGATTT GAT AAATCAGC TATTTTTTGAATTAA PAa_0192 231343 - 231107 - | hypothetical protein TERM 349 231595 - 231631 + H 100 -10.5 -5.71712 | opp_overlap 231595 231587 231623 AGAACAACAAATTTA TCCAAATTGTTTATT AATTAAA AATAAACAGTTTGGA TTTTTTTGTATCCAA TERM 350 231650 - 231623 - H 91 -8.6 -4.96773 | opp_overlap 231595, overlap 231595 231587 TTAATTAAAAATAAA CAGTTTGGAT TTTTTTGT ATCCAAACTG AGAAAAAGGAGTTTG PAa_0193 231670 - 232953 + | Replicative DNA helicase, prophage PAa_0194 232976 - 233608 + | hypothetical protein tmk 233598 - 234245 + | Thymidylate kinase PAa_0196 234265 - 234441 + | hypothetical protein PAa_0197 234522 - 234983 + | hypothetical protein himA 234976 - 235266 + | DNA-binding protein HU TERM 351 235332 - 235313 - g 72 -6.6 -4.15029 | AGTTGATAGAAATAA TTTTTTCA AAAA TGAAAAAA AAACTACTATTTATA TERM 352 235826 - 235839 + G 70 -5.3 -4.53777 | opp_overlap 235824 235826 TAGTCTTCCCAAAGA CGTTT TTGA AAACG TTGTTTTTCATTCAG PAa_0199 235290 - 235967 + | Putative N6 adenine-specific DNA methyltransferase TERM 353 236254 - 236240 - g 72 -3.6 -5.21459 | overlap 236242 AAAAACAAAAAGAAA TCGTTT AAA AAACAA AGAAAAGTTATTAAA PAa_0200 236090 - 236278 + | hypothetical protein PAa_0201 236294 - 236734 + | hypothetical protein TERM 354 236797 - 236815 + G 77 -6.2 -4.72029 | CTTTAATGTTTATCA TTAAAAAA ATC TTTTTTAA TTTTCTTCCATTACC PAa_0202 236727 - 236963 + | hypothetical protein TERM 355 237624 - 237606 - g 72 -6.8 -4.20888 | TTAATTCAAAAAATA GCTGATTT ATC AAATCAAC GCGAACAAATCAATG TERM 356 237948 - 237930 - g 74 -6.8 -4.29621 | overlap 237933 237946 GATAAACAAATTAAA CAACTTCA AAA TGAAATTG AAGCAATCAAAAACC PAa_0203 237165 - 239306 + | Putative IMP dehydrogenase/GMP reductase TERM 357 241240 - 241222 - g 83 -7.5 -4.77216 | AACAACATGTAAAAA CTTTGGA AGAAA TCCAAAG ACAAATTACAAATTA PAa_0204 239355 - 242849 + | hypothetical protein TERM 358 242843 - 242872 + F 75 -8.8 -3.25072 | gap 1, overlap 242838 TAAAACATGGTTTGG TC-GGTAATGCAA TTTTT TTGCATTACCAGA TTGGATTATGATACA TERM 359 243705 - 243689 - g 70 -5.1 -4.72272 | GCCGTTTATGAAAAA CCCTTTT GAC AAATGGG AAGTAAAAGATAGCA PAa_0205 242931 - 244013 + | hypothetical protein TERM 360 244028 - 244062 + F 100 -9.6 -5.95166 | opp_overlap 244028 ATAAATATTTTAAAA CAACAATAAAATTTCT TAA AAAGATTTTATTGTTG TTTTTTTTAATTAAA TERM 361 244062 - 244028 - f 89 -9.6 -4.2243 | opp_overlap 244028 ATAAATATTTTAAAA CAACAATAAAATTTCT TAA AAAGATTTTATTGTTG TTTTTTTTAATTAAA PAa_0206 244143 - 245315 + | Putative phage integrase TERM 362 245568 - 245590 + T 73 -5.8 -4.87626 | overlap 245570 ATTTTTAGATTATTA TGTAAAAAAA TCA TTTTTTTATA TTTTTAGTATTGACA TERM 363 245696 - 245642 - T 100 -17.8 -3.66139 | opp_overlap 245644 245650 245654 245658, overlap 245644 245650 245654 245658 CATATATATGGTAAA TATATAAAGAAAGAAATAAAAACTAT TCA AAAGTTTTTATTTCTTTCTTTATATT ACATATACATATATT TERM 364 245694 - 245644 - T 100 -20.4 -3.40558 | opp_overlap 245644 245650 245654 245658, overlap 245642 245650 245654 245658 TATATATGGTAAATA TATAAAGAAAGAAATAAAAACTAT TCA AAAGTTTTTATTTCTTTCTTTATA TTACATATACATATA TERM 365 245644 - 245694 + T 100 -20.4 -3.14026 | opp_overlap 245642 245644 245650 245654 245658, overlap 245650 245654 245658 TATATATGGTAAATA TATAAAGAAAGAAATAAAAACTAT TCA AAAGTTTTTATTTCTTTCTTTATA TTACATATACATATA TERM 366 245688 - 245650 - T 100 -15 -4.27886 | opp_overlap 245644 245650 245654 245658, overlap 245644 245642 245654 245658 TGGTAAATATATAAA GAAAGAAATAAAAACTAT TCA AAAGTTTTTATTTCTTTC TTTATATTACATATA TERM 367 245650 - 245688 + T 100 -15 -4.22678 | opp_overlap 245650 245644 245642 245654 245658, overlap 245644 245654 245658 TGGTAAATATATAAA GAAAGAAATAAAAACTAT TCA AAAGTTTTTATTTCTTTC TTTATATTACATATA TERM 368 245654 - 245684 + T 100 -10 -4.68511 | opp_overlap 245650 245644 245642 245654 245658, overlap 245650 245644 245658 AAATATATAAAGAAA GAAATAAAAACTAT TCA AAAGTTTTTATTTC TTTCTTTATATTACA TERM 369 245684 - 245654 - T 100 -10 -4.69487 | opp_overlap 245654 245650 245644 245658, overlap 245650 245644 245642 245658 AAATATATAAAGAAA GAAATAAAAACTAT TCA AAAGTTTTTATTTC TTTCTTTATATTACA TERM 370 245658 - 245680 + T 70 -5 -4.84602 | opp_overlap 245654 245650 245644 245642 245658, overlap 245654 245650 245644 ATATAAAGAAAGAAA TAAAAACTAT TCA AAAGTTTTTA TTTCTTTCTTTATAT TERM 371 245680 - 245658 - T 70 -5 -4.84602 | opp_overlap 245658 245654 245650 245644, overlap 245654 245650 245644 245642 ATATAAAGAAAGAAA TAAAAACTAT TCA AAAGTTTTTA TTTCTTTCTTTATAT TERM 372 245734 - 245756 + T 79 -3.6 -5.7946 | opp_overlap 245718, overlap 245718 245716 TAAATAATATTATTA TTTTATACTT ATA AAATATAAAA TTTTTTTCTTCAAAA TERM 373 246086 - 246098 + T 70 -6.3 -4.20367 | GTGAAAAGTGTTGTT TGGAT TCC ATCCA TTCTTTGTTCAAGAA TERM 374 246229 - 246243 + T 87 -7.2 -5.21459 | TTTAATAACTTTTCT TCGTTT TTT AAACGA TTTCTTTTTGTTTTT PAa_0208 246393 - 246205 - | hypothetical protein PAa_0210 248076 - 246793 - | Replicative DNA helicase, prophage TERM 375 248096 - 248123 + H 91 -8.6 -4.96773 | opp_overlap 248115, overlap 248107 248115 CAAACTCCTTTTTCT CAGTTTGGAT ACAAAAAA ATCCAAACTG TTTATTTTTAATTAA TERM 376 248151 - 248115 - H 100 -10.5 -5.71712 | opp_overlap 248096 248107 248115 TTGGATACAAAAAAA TCCAAACTGTTTATT TTTAATT AATAAACAATTTGGA TAAATTTGTTGTTCT TERM 377 248846 - 248823 - H 71 -6.8 -4.09984 | overlap 248821 ACAAAAAAAACAACA TCACAATCTA TCAA TAGATAGTGA AATAAACCTGAACCC TERM 378 248896 - 248880 - H 77 -8.7 -3.45788 | opp_overlap 248879 248873 248880, overlap 248878 248865 CCCGAGAATAGAATA CATCCGC TAC GCAGATG ATTTTATTATTGGAA TERM 379 250071 - 250058 - H 86 -5.3 -5.79588 | CTAAAATTAAAAAAA TTTCC AAAG GGAAA AAGGGAAGGTGTTTT TERM 380 251813 - 251797 - g 77 -5.2 -5.1356 | TTTTACGAAGAAAAA GAGAAA ATCGA TTTCTC CCTCAAAAAAAATAT gyrB 250087 - 252075 + | DNA gyrase beta subunit TERM 381 252843 - 252857 + G 73 -7.8 -3.78934 | opp_overlap 252843 AAAACGCCTACAAAA CCGGTC AAG GATCGG TTATTATAAAAGCCA TERM 382 252857 - 252843 - g 70 -5.6 -4.41844 | opp_overlap 252843 AAAACGCCTACAAAA CCGGTC AAG GATCGG TTATTATAAAAGCCA TERM 383 253249 - 253232 - g 86 -5.7 -5.48514 | overlap 253226 ATCAACAAACAAAAA TTTTTTG AACT CAAAAAA GCTCAAGCAAGAAAA TERM 384 253875 - 253892 + G 78 -8.5 -3.70412 | opp_overlap 253874 TAAGCGATAAAAGCT CTAAAGG GATC CCTTTAG TTAATTTATTAAATT TERM 385 254057 - 254044 - g 72 -6.7 -4.11371 | opp_overlap 254044 TAATATTCGCGAAAA TGGCA AAAT TGCCA TTGTTTTAAGAGATG TERM 386 254044 - 254057 + G 72 -6.7 -4.17762 | opp_overlap 254044 TAATATTCGCGAAAA TGGCA AAAT TGCCA TTGTTTTAAGAGATG TERM 387 254132 - 254104 - g 70 -7.5 -3.45571 | overlap 254098 GGTTGCAAACACCAA TGGACGTCAAAAT ATT ATTTTGGCTTCCA ATAACGGTAATGCTA gyrA 252125 - 254584 + | DNA gyrase alpha subunit PAa_0215 254577 - 255047 + | hypothetical protein TERM 388 255280 - 255268 - g 95 -4.9 -5.94713 | opp_overlap 255268, overlap 255256 255255 255254 ACCTTACAAAAAAAA CTTTT TGT AAAAG ATTATGTTGCCTCTA TERM 389 255601 - 255617 + G 71 -8.1 -3.15129 | overlap 255598 TATCATTCTTCTTTT TTGGAAA CTT TTTCCAA TCATTTATTAATTAC PAa_0216 255103 - 255747 + | hypothetical protein TERM 390 255784 - 255803 + T 71 -6.5 -4.02119 | opp_overlap 255784, overlap 255782 TATATTATAAAAAAA GAGTCTT GTTACA AAGACTC TATTTTGTTATCGTA TERM 391 255803 - 255784 - T 90 -6.5 -5.69473 | opp_overlap 255784 255782 TATATTATAAAAAAA GAGTCTT GTTACA AAGACTC TATTTTGTTATCGTA TERM 392 255929 - 255908 - T 81 -7.5 -4.40037 | opp_overlap 255902 255908 255907 255903, overlap 255902 AAAGAATGATTAAAA TTTTTTAAG TTTG CTTAAAAAA GTTTGTTTAAAAAAG TERM 393 256305 - 256286 - T 93 -6.5 -5.90981 | opp_overlap 256284 256286 TTATATTAAAAAAAA GAGTCTT GTTGCA AAGACTC TATTTTTATAACCTA TERM 394 256286 - 256305 + T 71 -6.5 -4.05067 | opp_overlap 256286, overlap 256284 TTATATTAAAAAAAA GAGTCTT GTTGCA AAGACTC TATTTTTATAACCTA PAa_0217 257008 - 256358 - | hypothetical protein PAa_0218 257555 - 257779 + | hypothetical protein TERM 395 257781 - 257761 - T 88 -4.7 -5.97575 | opp_overlap 257761 257757 257763, overlap 257763 AAGGCATAAAAAAAA GACTATCTC AAA AAGATAGAC TTTATTTTTTGAAAT TERM 396 257779 - 257763 - T 74 -5.9 -4.62054 | opp_overlap 257761 257757 257763, overlap 257761 GGCATAAAAAAAAGA CTATCTC AAA AAGATAG ACTTTATTTTTTGAA PAa_0219 258541 - 257960 - | hypothetical protein TERM 397 258504 - 258490 - G 70 -6.4 -4.12188 | TTACTACCGCTAAAA CAACTG CAA CAGCTG AACTAACTAGTATTT TERM 398 258714 - 258732 + r 75 -6.8 -4.39426 | opp_overlap 258714 TTATCAAAAAAAATT GGCAAAAA AAG TTTTTGTC TTTTCTCACACTCTA TERM 399 258972 - 259003 + r 100 -8.8 -5.79588 | opp_overlap 258980, overlap 258973 258974 TTATTTTTAGTATTT TTGGAAAACCACTT TTTA AGGTGGTTTTCCCG TTTTTTTAGTTTTGA TERM 400 258973 - 259002 + r 93 -10.1 -4.05313 | opp_overlap 258980, overlap 258972 258974 TATTTTTAGTATTTT TGGAAAACCACTT TTTA AGGTGGTTTTCCC GTTTTTTTAGTTTTG TERM 401 258974 - 259001 + r 95 -13.6 -3.00747 | opp_overlap 258980, overlap 258973 258972 ATTTTTAGTATTTTT GGAAAACCACTT TTTA AGGTGGTTTTCC CGTTTTTTTAGTTTT PAa_0220 259811 - 259104 - | hypothetical protein TERM 402 259881 - 259891 + H 82 -2.6 -6.28401 | TTCCCTTCGTTTTTA TTTT TTT AAAA TTTTTTTGTTTTTTA TERM 403 260185 - 260202 + H 73 -3.5 -5.53288 | opp_overlap 260188 TAAAATTGTATAAAA TAATTTG TTTT CAAATTG TTTTTTTGGATTAAG TERM 404 260384 - 260417 + H 70 -3.3 -5.29742 | opp_overlap 260376 AAAAGAATTCCATTA GGAAATAAAATATTT TAAA AAATTATTTGTTTCC TTTGTTTTTTTGTAT TERM 405 260430 - 260440 + H 76 -2.6 -5.83822 | TCCTTTGTTTTTTTG TATT TAT AATA TTTTTTTTAACTATA gtfA 260515 - 261975 + | Sucrose phosphorylase (Glucosyltransferase-A) TERM 406 261990 - 262030 + T 90 -6.3 -5.96894 | opp_overlap 261994, overlap 261994 AGTAAATTTGTTAAA AAAATAAACTCTCACAGTT AAA AGCTGCAAGAGTTTATTTC TTTTTTTATTTGGCT TERM 407 261994 - 262026 + T 90 -7.1 -5.36181 | opp_overlap 261994, overlap 261990 AATTTGTTAAAAAAA TAAACTCTCACAGTT AAA AGCTGCAAGAGTTTA TTTCTTTTTTTATTT TERM 408 262026 - 261994 - T 100 -9.3 -5.41746 | opp_overlap 261990 261994 AATTTGTTAAAAAAA TAAACTCTCACAGTT AAA AGCTGCAAGAGTTTA TTTCTTTTTTTATTT lepA 263853 - 262036 - | GTP-binding protein LepA PAa_0223 264577 - 263870 - | hypothetical protein TERM 409 265143 - 265121 - R 84 -4.9 -5.80951 | opp_overlap 265121 ATGGAAAAGAAAAAA GAGCCTA GGAAAAATA TAGGCTC TTTTGAGAGGGGTTT PAa_0224 265642 - 265157 - | hypothetical protein TERM 410 265872 - 265908 + H 100 -10.5 -5.71712 | opp_overlap 265872 265864 265900 AGAACAACAAATTTA TCCAAATTGTTTATT AATTAAA AATAAACAGTTTGGA TTTTTTTGTATCCAA TERM 411 265927 - 265900 - H 91 -8.6 -4.96773 | opp_overlap 265872, overlap 265872 265864 TTAATTAAAAATAAA CAGTTTGGAT TTTTTTGT ATCCAAACTG AGAAAAAGGAGTTTG PAa_0225 265947 - 267230 + | Replicative DNA helicase, prophage PAa_0226 267253 - 267885 + | hypothetical protein tmk 267875 - 268522 + | Thymidylate kinase PAa_0228 268542 - 268718 + | hypothetical protein PAa_0229 268799 - 269260 + | hypothetical protein himA 269253 - 269543 + | DNA-binding protein HU TERM 412 269609 - 269590 - g 72 -6.6 -4.15029 | AGTTGATAGAAATAA TTTTTTCA AAAA TGAAAAAA AAGCTACTATTTATA TERM 413 270103 - 270116 + G 70 -5.3 -4.53777 | opp_overlap 270103 270101 TAGTCTTCCCAAAGA CGTTT TTGA AAACG TTGTTTTTCATTCAG PAa_0231 269567 - 270244 + | Putative N6 adenine-specific DNA methyltransferase TERM 414 270531 - 270517 - g 72 -3.6 -5.21459 | overlap 270519 AAAAACAAAAAGAAA TCGTTT AAA AAACAA AGAAAAGTTATTAAA PAa_0232 270367 - 270555 + | hypothetical protein PAa_0233 270571 - 271011 + | hypothetical protein TERM 415 271074 - 271092 + G 77 -6.2 -4.72029 | CTTTAATGTTTATCA TTAAAAAA ATC TTTTTTAA TTTTCTTCCATTACC PAa_0234 271004 - 271240 + | hypothetical protein TERM 416 272225 - 272207 - g 74 -6.8 -4.29621 | overlap 272210 272223 GATAAACAAATTAAA CAACTTCA AAA TGAAATTG AAGCAATCAAAAACC PAa_0235 271442 - 273583 + | Putative IMP dehydrogenase/GMP reductase TERM 417 275516 - 275498 - f 86 -7.5 -4.77216 | AACAACATGTAAAAA CTTTGGA AGAAA TCCAAAG ACAAATTACAAATTA TERM 418 277119 - 277148 + F 75 -8.8 -3.25072 | gap 1, overlap 277114 TAAAACATGGTTTGG TC-GGTAATGCAA TTTTT TTGCATTACCAGA TTAGATTATGATACA TERM 419 277981 - 277965 - g 70 -5.1 -4.72272 | GCCGTTTATGAAAAA CCCTTTT GAG AAATGGG AAGTAAAAGATAGCA PAa_0238 277207 - 278289 + | hypothetical protein TERM 420 278304 - 278338 + T 100 -9.6 -5.95166 | opp_overlap 278304 ATAAATATTTTAAAA CAACAATAAAATTTCT TAA AAAGATTTTATTGTTG TTTTTTTTAATTAAA TERM 421 278338 - 278304 - T 89 -9.6 -4.2243 | opp_overlap 278304 ATAAATATTTTAAAA CAACAATAAAATTTCT TAA AAAGATTTTATTGTTG TTTTTTTTAATTAAA TERM 422 279846 - 279868 + T 73 -5.8 -4.87626 | overlap 279848 ATTTTTAGATTATTA TGTAAAAAAA TCA TTTTTTTATA TTTTTAGTATTGACA TERM 423 279974 - 279920 - T 100 -16.4 -3.66541 | opp_overlap 279922 279928 279932 279936, overlap 279907 279922 279928 279932 279936 AATATATATGGTAAA TATATAAAGAAATAAATAAAAACTAT TCA AAAGTTTTTATTTATTTCTTTATATT ACATATACATATATT TERM 424 279922 - 279972 + T 100 -19 -3.14026 | opp_overlap 279907 279922 279920 279928 279932 279936, overlap 279928 279932 279936 TATATATGGTAAATA TATAAAGAAATAAATAAAAACTAT TCA AAAGTTTTTATTTATTTCTTTATA TTACATATACATATA TERM 425 279972 - 279922 - T 100 -19 -3.40558 | opp_overlap 279922 279928 279932 279936, overlap 279907 279920 279928 279932 279936 TATATATGGTAAATA TATAAAGAAATAAATAAAAACTAT TCA AAAGTTTTTATTTATTTCTTTATA TTACATATACATATA TERM 426 279966 - 279928 - T 100 -13.6 -4.27886 | opp_overlap 279922 279928 279932 279936, overlap 279922 279920 279932 279936 TGGTAAATATATAAA GAAATAAATAAAAACTAT TCA AAAGTTTTTATTTATTTC TTTATATTACATATA TERM 427 279928 - 279966 + T 100 -13.6 -4.22678 | opp_overlap 279928 279922 279920 279932 279936, overlap 279922 279932 279936 TGGTAAATATATAAA GAAATAAATAAAAACTAT TCA AAAGTTTTTATTTATTTC TTTATATTACATATA TERM 428 279962 - 279932 - T 85 -8.6 -4.69487 | opp_overlap 279928 279922 279932 279936, overlap 279928 279922 279920 279936 AAATATATAAAGAAA TAAATAAAAACTAT TCA AAAGTTTTTATTTA TTTCTTTATATTACA TERM 429 279932 - 279962 + T 85 -8.6 -4.68511 | opp_overlap 279932 279928 279922 279920 279936, overlap 279928 279922 279936 AAATATATAAAGAAA TAAATAAAAACTAT TCA AAAGTTTTTATTTA TTTCTTTATATTACA TERM 430 279958 - 279936 - T 70 -5 -4.84602 | opp_overlap 279932 279928 279922 279936, overlap 279932 279928 279922 279920 ATATAAAGAAATAAA TAAAAACTAT TCA AAAGTTTTTA TTTATTTCTTTATAT TERM 431 279936 - 279958 + T 70 -5 -4.84602 | opp_overlap 279936 279932 279928 279922 279920, overlap 279932 279928 279922 ATATAAAGAAATAAA TAAAAACTAT TCA AAAGTTTTTA TTTATTTCTTTATAT TERM 432 280012 - 280034 + T 79 -3.6 -5.7946 | opp_overlap 279996, overlap 279996 279994 TAAATAATATTATTA TTTTATACTT ATA AAATATAAAA TTTTTTTCTTCAAAA PAa_0241 280647 - 280279 - | hypothetical protein TERM 433 280766 - 280747 - H 90 -6.5 -5.75478 | opp_overlap 280747 280750 AAGGATATAAAAAAA GAACCTA AAAAAA TAGGTTC TTGAATGGTAATGAT PAa_0242 281221 - 281427 + | hypothetical protein PAa_0243 281639 - 281403 - | hypothetical protein TERM 434 281569 - 281551 - G 77 -6.2 -4.72029 | GGTAATGGAAGAAAA TTAAAAAA GAT TTTTTTAA TGATAAACATTAAAG PAa_0244 282072 - 281632 - | hypothetical protein TERM 435 282112 - 282126 + r 87 -7.2 -5.21459 | TTTAATAACTTTTCT TCGTTT TTT AAACGA TTTCTTTTTGTTTTT PAa_0245 282276 - 282088 - | hypothetical protein PAa_0246 282544 - 282278 - | hypothetical protein PAa_0248 283302 - 282847 - | hypothetical protein PAa_0249 283934 - 283383 - | hypothetical protein dam 284811 - 283999 - | Site-specific DNA methylase TERM 436 284497 - 284478 - G 95 -6.4 -5.65678 | overlap 284471 ATAAAACATAAAAAA GGGCACTT TTAT AAGCACCC AAATTACTTTTATTA PAa_0251 285595 - 285350 - | hypothetical protein gepA 286127 - 285639 - | Uncharacterized phage-associated protein TERM 437 287388 - 287424 + r 73 -9.1 -2.87344 | opp_overlap 287408, overlap 287388 TGAAATTATCTATAT TTTTTTAGTTTTAAAGA ATA TTTTTAAAACAAAAAAA TGTCTAAAAAACATC TERM 438 287437 - 287425 - R 80 -2.7 -6.09196 | TTTAAAACAAAAAAA TGTCT AAA AAACA TCATCTCCCCATTTT PAa_0255 288752 - 287469 - | Replicative DNA helicase, prophage PAa_0256 289054 - 288827 - | hypothetical protein TERM 439 289246 - 289262 + r 70 -3.1 -5.42259 | overlap 289247 289253 TCGAATTATTGGGGA TTTAAAA TAT TTTTAAG TTTTTTTAAGAATAA PAa_0258 289691 - 289236 - | RNA polymerase sigma factor TERM 440 289779 - 289760 - H 86 -5.8 -5.79595 | overlap 289769 CTTGAAAAGAAAAAA GACTAACT ATTA AGTTAATC TTAAAGAATTTTTAA PAa_0263 293082 - 293402 + | hypothetical protein TERM 441 293458 - 293425 - T 80 -8.5 -4.20042 | gap 1, opp_overlap 293425, overlap 293428 ATTAATATTTTAAAA CAACAATAAAA-CTTC TTA AAAGATTTTATTGTTG TTTTTTCAATTTTTG TERM 442 293425 - 293458 + T 100 -7.8 -5.30575 | gap 1, opp_overlap 293425 293428 ATTAATATTTTAAAA CAACAATAAAA-CTT CTTAA AAGATTTTATTGTTG TTTTTTCAATTTTTG TERM 443 295009 - 295031 + T 72 -3.6 -5.4505 | opp_overlap 295007 295009, overlap 295004 TTGACAACAATAATA TTTTATACTT ATA AAATATAAAA TTTTTTCTTCAAAAA PAa_0266 296060 - 295383 - | hypothetical protein artI 297575 - 296511 - | ABC-type arginine transport system,permease component TERM 444 297734 - 297752 + r 78 -4.6 -5.63103 | CATCTTTTAATTTTT GATAATCT TTG AGATTTTC TTTTTTTAATTAAAA PAa_0268 298219 - 297899 - | hypothetical protein PAa_0269 298247 - 298456 + | hypothetical protein TERM 445 298525 - 298561 + T 86 -4.6 -5.89659 | opp_overlap 298525, overlap 298553 GAAACATTTAGGACA CTTTTTATTTTTTTCC TGAAT GGGAAAATAAAAAAAG TTTTTGTTTTTTTCT TERM 446 298810 - 298823 + T 83 -3.9 -5.98675 | opp_overlap 298801 298810 TAAATATTTTAACAA CTAAA AAAA TTTAG TTTTTTGTTTTTGTA TERM 447 299151 - 299168 + T 95 -6.3 -6.09196 | opp_overlap 299151 299145 CAACTAAAACAAAAA GAGACTT TTTA AGGTCTC TTTTTTTCTTTTAAA TERM 448 299168 - 299151 - T 75 -4.1 -5.54338 | opp_overlap 299151, overlap 299145 CAACTAAAACAAAAA GAGACTT TTTA AGGTCTC TTTTTTTCTTTTAAA zntA 301103 - 299187 - | Cation transport ATPase TERM 449 299636 - 299624 - G 75 -3.4 -5.40072 | opp_overlap 299609 299609 299624, overlap 299607 CTTCTTTTAAAAAAA GAAC GCTTT GTTC GTTATCGCCTGAAAT TERM 450 301060 - 301081 + g 73 -3.1 -5.37865 | ATACCTATAAAAAAA CAAATTAAG GGTT TTTGATTTG TTTTTTCGTTATTGA spoVG 301464 - 301174 - | Putative septation protein spoVG (Stage V sporulation protein G) ksgA 302436 - 301582 - | Dimethyladenosine transferase (S-adenosylmethionine-6-N',N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (High level kasugamycin resistance protein ksgA) PAa_0273 303718 - 302459 - | HD superfamily phosphohydrolase TERM 451 303947 - 303966 + r 75 -8 -3.8535 | opp_overlap 303947 303946 303949 TTATATTCTAGGAAT TACAAAAG CAGT CTTTTGTA TGTTTATTTAGGTTG TERM 452 304135 - 304123 - R 70 -4.9 -4.84359 | opp_overlap 304123 304121 304132, overlap 304132 CTAGCGGCATAAAAA TTCAT AAT ATGAA TGTCTTCAAATTTTT pduL 304749 - 304174 - | Putative propanediol utilization protein TERM 453 304837 - 304818 - R 77 -8 -4.12599 | overlap 304829 AATAATTCTGTAAAA GCAAAAAA TGAG TTTTTTGC AAAAACAAGAAAAAT TERM 454 304875 - 304894 + r 83 -3.6 -5.93809 | opp_overlap 304875 304874 TTGGAAAAAAATTAG GATTAACT CAAA AGTCAATC TTTTTTTTATCGCAA TERM 455 304974 - 304993 + r 100 -8.6 -5.60993 | opp_overlap 304973 TTAAAAAAAATTTAT GACCGACT TTTT AGTTGGTC TTTTTTTGTACACAA TERM 456 305944 - 305977 + r 78 -7.8 -4.2243 | gap 1, opp_overlap 305944 AATAATTGAAAAAAA CAACAATAAAA-CTT CTTAA AAGATTTTATTGTTG TTTTAAAATATTTAT TERM 457 305977 - 305944 - R 100 -8.5 -5.57054 | gap 1, opp_overlap 305944 AATAATTGAAAAAAA CAACAATAAAA-CTTC TTA AAAGATTTTATTGTTG TTTTAAAATATTTAT PAa_0276 306298 - 305996 - | hypothetical protein TERM 458 307599 - 307583 - H 71 -5.7 -4.67011 | AAGTCCACCTAAAAA CGTACCC AAA GGGCCCG CAGCACTTCCCAACG PAa_0283 311736 - 312251 + | hypothetical protein TERM 459 315186 - 315168 - f 86 -7.5 -4.77216 | AACAACATGTAAAAA CTTTGGA AGAAA TCCAAAG ACAAATTACAAATTA TERM 460 316628 - 316616 - f 70 -3.3 -5.41143 | GATGCTGTAAAAAAA CGTAG GTA CTGCG ATTAACATAGGTGTT TERM 461 316790 - 316819 + F 75 -8.8 -3.25072 | gap 1, overlap 316785 TAAAACATGGTTTGG TC-GGTAATGCAA TTTTT TTGCATTACCAGA TTAGATTATGATACA TERM 462 318187 - 318175 - g 74 -4.9 -5.16681 | overlap 318180 TTAAAAAGAACAAAA GAAAA TAT TTTTC AAATAAAACAAAAAA TERM 463 318192 - 318180 - g 72 -3.5 -5.33124 | overlap 318175 AAGAACAAAAGAAAA TATTT TTC AAATA AAACAAAAAAATCCT TERM 464 318289 - 318279 - g 71 -2.6 -5.39221 | overlap 318286 ACAACAACCAAAAAA TAAA AGA TTTA AAACAATTGATTTAA PAa_0288 317989 - 318354 + | hypothetical protein TERM 465 318346 - 318380 + T 100 -9.6 -5.95166 | opp_overlap 318346 ATAAATATTTTAAAA CAACAATAAAATTTCT TAA AAAGATTTTATTGTTG TTTTTTTTAATTAAA TERM 466 318380 - 318346 - T 89 -9.6 -4.2243 | opp_overlap 318346 ATAAATATTTTAAAA CAACAATAAAATTTCT TAA AAAGATTTTATTGTTG TTTTTTTTAATTAAA PAa_0291 320934 - 319897 - | Putative methyltransferase TERM 467 320438 - 320456 + g 71 -3.9 -5.07652 | CCAAATGGAGGGTTT CCGAAAA CGATA TTTTTGG TTTTCTTTTCGGGAA TERM 468 320511 - 320537 + g 83 -6.7 -4.93877 | gap 1, opp_overlap 320513, overlap 320513 TGTAATTTTTGTTAA TA-TTGGGGTTG ATTT CGACCCCAATTA TTTTATTTGGTGGGA TERM 469 320534 - 320513 - G 73 -8.7 -3.02461 | opp_overlap 320513 320511 TAATTTTTGTTAATA TTGGGGTTG ATTT CGACCCCAA TTATTTTATTTGGTG TERM 470 320513 - 320534 + g 100 -10.9 -4.56436 | opp_overlap 320513, overlap 320511 TAATTTTTGTTAATA TTGGGGTTG ATTT CGACCCCAA TTATTTTATTTGGTG TERM 471 321163 - 321178 + r 91 -10.4 -3.4968 | overlap 321160 GTTTATGCTTTATCT GAGCCC TTGA GGGCTC TTAGATTTTTCTCAT PAa_0292 322040 - 321435 - | hypothetical protein TERM 472 321866 - 321893 + g 83 -8.4 -4.63089 | gap 1, overlap 321864 GAATTTGATTTTTGG GGCGGTAGTTCGC TTC GCGA-TAACCGCC TTCTTTTTTAGAGTG TERM 473 322142 - 322127 - R 100 -9 -5.26119 | opp_overlap 322124 322127 322129 TTGGTAAAAAGAAAA GACCCT TGAA AGGGTC TAATGTTTAGTTAGT TERM 474 322127 - 322142 + r 73 -9 -2.906 | opp_overlap 322127, overlap 322124 322129 TTGGTAAAAAGAAAA GACCCT TGAA AGGGTC TAATGTTTAGTTAGT TERM 475 322358 - 322374 + r 76 -2.3 -5.81622 | opp_overlap 322359, overlap 322359 322369 TGCAATGAATAAGGA ATTTTAG TTT CTAAAAA TTTTTTTAATTTTAT TERM 476 324232 - 324247 + r 82 -10.4 -2.80876 | overlap 324231 ACAATTTTTGATTTG TCGCGG TTTA CCGCGA GTTTCAAGTCTTGTT TERM 477 324335 - 324351 + r 77 -8.7 -3.45788 | opp_overlap 324334 324329 324335, overlap 324334 324321 TTCCAATAATAAAAT CATCTGC GTA GCGGATG TATTCTATTCTCGGG TERM 478 324385 - 324408 + r 71 -6.8 -4.04185 | overlap 324383 GGGTTCAGGTTTATT TCACTATCTA TTGA TAGATTGTGA TGTTGTTTTTTTGTG TERM 479 325297 - 325285 - R 74 -9.1 -3.02144 | opp_overlap 325284 325283 325280 TTAGTTTTCCTAAGA GCCCT GGG AGGGC AATTATCATTGTTAT TERM 480 326354 - 326366 + r 83 -6.3 -5.3658 | overlap 326350 GTTGATGATATCATT CCAAA TGT TTTGG TTTTCTTTTTCTGCT TERM 481 326413 - 326398 - R 79 -4.8 -5.58209 | overlap 326389 TTAAACGTAAAAAAA GAATTT TACA AAATTC GGTAAATCTTTCATC TERM 482 326609 - 326624 + r 73 -9 -2.85021 | opp_overlap 326609, overlap 326611 TTGGTGAAAAGAAAA GACCCT TGAA AGGGTC TGTAATGAATTATTT TERM 483 326624 - 326609 - R 100 -9 -5.07652 | opp_overlap 326609 326611 TTGGTGAAAAGAAAA GACCCT TGAA AGGGTC TGTAATGAATTATTT PAa_0298 326921 - 326634 - | hypothetical protein PAa_0299 327677 - 327447 - | hypothetical protein TERM 484 327573 - 327585 + g 80 -9.1 -3.56727 | opp_overlap 327562 327573 GAAATTAAAGAAAAA GCCCT TTA AGGGC TTGTGGTTGATTGAA TERM 485 327585 - 327573 - G 100 -9.1 -5.41941 | opp_overlap 327573, overlap 327562 GAAATTAAAGAAAAA GCCCT TTA AGGGC TTGTGGTTGATTGAA TERM 486 328088 - 328070 - R 73 -3.1 -5.59357 | opp_overlap 328064 328070 ATTACATCAAAAAAA CCTTCAT GGATA ATGACGG TTTTTGCTTGTTTGA TERM 487 328418 - 328459 + r 70 -4.3 -5.0666 | opp_overlap 328415 328423 TTATCGGATAGAGGA GCGAACCCCAGGCTGAATT CTTT AATTGTGGCTGGGGTGAGC TTTCTTTTTTCGGTC PAa_0303 331123 - 330518 - | hypothetical protein TERM 488 331211 - 331196 - R 100 -9 -5.55855 | opp_overlap 331198 GGTAAAAAAAGAAAA GACCCT TAAA AGGGTC TGTGGGTGGTTTTAG tmk 331964 - 331335 - | Thymidylate kinase TERM 489 332001 - 332018 + r 90 -9.9 -3.73122 | opp_overlap 332001 TTTTAAATGAAAAAA GACCTTC GCGA GAAGGTC TTTAGCGTTATTCTG TERM 490 332018 - 332001 - R 100 -9.9 -5.37593 | opp_overlap 332001 TTTTAAATGAAAAAA GACCTTC GCGA GAAGGTC TTTAGCGTTATTCTG PAa_0305 333555 - 332026 - | hypothetical protein TERM 491 333540 - 333526 - G 71 -4.2 -5.04249 | opp_overlap 333526 333527 333539, overlap 333527 GTCCCAAAAAATAAA CCCATC TTT GATGGC TGTTTGGTGTGCCAA TERM 492 333539 - 333527 - G 71 -7.7 -3.61465 | opp_overlap 333526 333527, overlap 333526 TCCCAAAAAATAAAC CCATC TTT GATGG CTGTTTGGTGTGCCA TERM 493 334043 - 334024 - R 84 -4.9 -5.64274 | opp_overlap 334024, overlap 334026 TTAGGTATAAAAAAA GACCCCT AGTTAA AGGGGAC TAAATTAGATTAAAA TERM 494 334041 - 334026 - R 72 -6.1 -4.46105 | opp_overlap 334024, overlap 334024 AGGTATAAAAAAAGA CCCCT AGTTAA AGGGG ACTAAATTAGATTAA TERM 495 334413 - 334394 - R 100 -7.8 -5.82316 | opp_overlap 334395, overlap 334395 ATGAGCCAAAAAAAA TGACCTCC ATTT GGAGGTCT TAATATCAATTAATA TERM 496 334412 - 334395 - R 100 -11.3 -4.07763 | opp_overlap 334395, overlap 334394 TGAGCCAAAAAAAAT GACCTCC ATTT GGAGGTC TTAATATCAATTAAT TERM 497 334395 - 334412 + r 93 -11.3 -3.30006 | opp_overlap 334395 334394 TGAGCCAAAAAAAAT GACCTCC ATTT GGAGGTC TTAATATCAATTAAT TERM 498 335015 - 335049 + r 72 -8.7 -2.7213 | overlap 335012 335011 GATAGATGTTTTTGG CGCCATTGGAGAGTT TCAAT AAATCTTCAATGGTG TAAGTTTGGTGTTTG PAa_0309 336425 - 335970 - | hypothetical protein PAa_0310 337288 - 336509 - | hypothetical protein TERM 499 337260 - 337250 - G 71 -2.6 -5.54403 | opp_overlap 337250 AAAAAAGAATAAAAA TATT TTC AATA ATTGTAATTTTTCTT PAa_0312 338309 - 337902 - | hypothetical protein TERM 500 338199 - 338223 + g 81 -10.3 -2.52529 | opp_overlap 338197, overlap 338195 338188 TAGATTTTCAATATG TTTTTCATTTT GAT AAAATGAAAAA ATATTAATAATTATA PAa_0313 338614 - 338327 - | hypothetical protein PAa_0314 339461 - 338730 - | hypothetical protein TERM 501 339478 - 339523 + H 89 -8.7 -4.71828 | gap 1, opp_overlap 339485 ATTTATTTACCTTTC TTG-ATAATGGTGATAATTAAT CAT ATCACTTATCACCATTATACAA TTTTATTAATAAAAT TERM 502 339515 - 339485 - H 80 -9.2 -3.28924 | opp_overlap 339478 TACCTTTCTTGATAA TGGTGATAATTAAT CAT ATCACTTATCACCA TTATACAATTTTATT TERM 503 339830 - 339851 + H 88 -6.6 -5.60993 | TTAAAAATTCTTTAA GACTGACT TATTTT AGTCGGTC TTTTTTTGTACCCAA TERM 504 340233 - 340219 - g 71 -4.2 -5.15634 | GACCTCATTAAAAAA TGCCAC CAA GCAGCA ATGCCTCGGCAAAAC fliA 339928 - 340599 + | DNA-directed RNA polymerase,specialized sigma subunit PAa_0317 340603 - 340914 + | Putative prophage-derived single-strand DNA-binding protein TERM 505 340997 - 341014 + F 95 -10.5 -4.32857 | opp_overlap 340997 ATCAAAATTTCACAA GGTCCGC GCTA GCGGGCC TTTCTCTTTAACAAA TERM 506 341014 - 340997 - f 74 -8.3 -3.42768 | opp_overlap 340997 ATCAAAATTTCACAA GGTCCGC GCTA GCGGGCC TTTCTCTTTAACAAA PAa_0318 341149 - 341946 + | hypothetical protein TERM 507 341971 - 341941 - T 100 -12.1 -5.46706 | gap 1, opp_overlap 341947, overlap 341947 ATGGGAAAAGAAAAA GAATAAGACCGCTA TTTT TAGCGGTCTT-TTC TTGTAAAACCCCATT TERM 508 341966 - 341947 - T 100 -12.2 -4.42156 | opp_overlap 341947, overlap 341941 AAAGAAAAAGAATAA GACCGCTA TTTT TAGCGGTC TTTTCTTGTAAAACC TERM 509 341947 - 341966 + T 100 -12.2 -4.77165 | opp_overlap 341941 341947 AAAGAAAAAGAATAA GACCGCTA TTTT TAGCGGTC TTTTCTTGTAAAACC TERM 510 342232 - 342246 + T 70 -3.6 -5.21459 | overlap 342234 TTTAATAACTTTTCT TTGTTT TTT AAACGA TTTCTTTTTGTTTTT PAa_0319 342396 - 342208 - | hypothetical protein PAa_0320 343196 - 342519 - | Putative N6 adenine-specific DNA methyltransferase fragment TERM 511 342660 - 342647 - G 70 -5.3 -4.53777 | opp_overlap 342647 342645 CTGAATGAAAAACAA CGTTT TCAA AAACG TCTTTGGGAAGACTA TERM 512 343154 - 343173 + g 72 -6.6 -4.15029 | TATAAATAGTAGCTT TTTTTTCA TTTT TGAAAAAA TTATTTCTATCAACT himA 343510 - 343220 - | DNA-binding protein HU PAa_0322 343964 - 343503 - | hypothetical protein PAa_0323 344221 - 344045 - | hypothetical protein tmk 344888 - 344241 - | Thymidylate kinase PAa_0325 345510 - 344878 - | hypothetical protein PAa_0326 346816 - 345533 - | Replicative DNA helicase, prophage TERM 513 346836 - 346863 + H 91 -8.6 -4.96773 | opp_overlap 346855, overlap 346847 346855 CAAACTCCTTTTTCT CAGTTTGGAT ACAAAAAA ATCCAAACTG TTTATTTTTAATTAA TERM 514 346891 - 346855 - H 100 -10.5 -5.71712 | opp_overlap 346836 346855 346847 TTGGATACAAAAAAA TCCAAACTGTTTATT TTTAATT AATAAACAATTTGGA TAAATTTGTTGTTCT TERM 515 347085 - 347070 - H 71 -5.4 -4.69549 | AATTCAAAAGGAAAA TCCCAC ATTC GTAGGA AGAAAATGTTTTGGC TERM 516 347184 - 347165 - g 72 -6.6 -4.15029 | AGTTGATAGAAATAA TTTTTTCA AAAA TGAAAAAA AAGCTACTATTTATA TERM 517 347678 - 347691 + G 70 -5.3 -4.53777 | opp_overlap 347678 347676 TAGTCTTCCCAAAGA CGTTT TTGA AAACG TTGTTTTTCATTCAG PAa_0327 347142 - 347780 + | Putative N6 adenine-specific DNA methyltransferase fragment PAa_0328 348114 - 348749 + | Putative phage-related protein (endonuclease) PAa_0329 348780 - 349061 + | hypothetical protein TERM 518 349196 - 349218 + F 79 -8.5 -4.14392 | gap 1, opp_overlap 349194 349195, overlap 349199 ATCAACTAACTAACT CCA-GACCCT TTCA AGGGTCTTGG TTTTACCAATTCGCA TERM 519 349199 - 349214 + F 79 -9 -3.68023 | opp_overlap 349194 349195, overlap 349196 AACTAACTAACTCCA GACCCT TTCA AGGGTC TTGGTTTTACCAATT himA 349455 - 349742 + | Bacterial nucleoid DNA-binding protein TERM 520 349860 - 349876 + F 78 -4.4 -5.60993 | opp_overlap 349860 AAAACTCAAATCAAA GGCCAT CCAAA ATGGTC TTTTTTTATGAAGAA TERM 521 350137 - 350125 - g 71 -2.7 -5.4505 | TTCCCCAACAAAAAA CTAAA AAA CTTAG AAATCCAAAATGCCA PAa_0331 349903 - 350343 + | hypothetical protein PAa_0332 350748 - 350948 + | hypothetical protein PAa_0333 350977 - 351246 + | hypothetical protein TERM 522 351412 - 351398 - g 91 -7.2 -5.21459 | AAAAACAAAAAGAAA TCGTTT AAA AAACGA AGAAAAGTTATTAAA PAa_0334 351248 - 351436 + | hypothetical protein TERM 523 351686 - 351674 - g 71 -2.7 -5.4505 | TTCCCCAACAAAAAA CTAAA AAA CTTAG AAATCCAAAATGCCA PAa_0335 351452 - 351892 + | hypothetical protein TERM 524 351955 - 351973 + G 77 -6.2 -4.72029 | CTTTAATGTTTATCA TTAAAAAA ATC TTTTTTAA TTTTCTTCCATTGCC PAa_0336 351885 - 352118 + | hypothetical protein PAa_0337 352137 - 352460 + | hypothetical protein PAa_0338 352562 - 353092 + | hypothetical protein TERM 525 353092 - 353076 - f 74 -5.2 -5.10933 | overlap 353081 353087 CTATTGAAAACAAAA TTAAGC AATTA GCTTAA TTAAAAGCAATAAGA TERM 526 353134 - 353099 - f 81 -7.8 -4.42238 | opp_overlap 353103 353106, overlap 353087 353103 353106 TTAGCTTAATTAAAA GCAATAAGACTAAGTT TTTT AACTTAGTCTTATTTG AGAAAGGAAATAAAT TERM 527 353130 - 353103 - f 95 -13 -3.75718 | opp_overlap 353103 353106, overlap 353099 353106 CTTAATTAAAAGCAA TAAGACTAAGTT TTTT AACTTAGTCTTA TTTGAGAAAGGAAAT TERM 528 353103 - 353130 + F 95 -13 -3.53091 | opp_overlap 353103 353099 353106, overlap 353106 CTTAATTAAAAGCAA TAAGACTAAGTT TTTT AACTTAGTCTTA TTTGAGAAAGGAAAT TERM 529 353127 - 353106 - f 95 -10.3 -3.9901 | opp_overlap 353103 353106, overlap 353103 353099 AATTAAAAGCAATAA GACTAAGTT TTTT AACTTAGTC TTATTTGAGAAAGGA TERM 530 353106 - 353127 + F 95 -10.3 -3.90744 | opp_overlap 353106 353103 353099, overlap 353103 AATTAAAAGCAATAA GACTAAGTT TTTT AACTTAGTC TTATTTGAGAAAGGA TERM 531 353310 - 353287 - g 83 -8.4 -4.49364 | opp_overlap 353283 AAACCGAAGAAGAAA TTATTTCTTT AAAA AAAGAAATAA AATCCCCCCCAACCA PAa_0339 353151 - 353678 + | Putative ATPase, fragment TERM 532 355467 - 355489 + G 78 -5.8 -4.87626 | opp_overlap 355452, overlap 355452 355469 TTTTTTAGATTATTA TGTAAAAAAA TTA TTTTTTTATA TTTTTAGTATTGACA PAa_0343 355299 - 355496 + | hypothetical protein PAa_0344 355499 - 355675 + | hypothetical protein TERM 533 355655 - 355684 + T 75 -3.6 -5.52384 | opp_overlap 355655 355660 355661, overlap 355660 355661 AGAAAAAAGAATAAC TTAAAGCCCTCA TTAATT TGAGGGATTTTA TTTTTTTCATCCCAA TERM 534 355660 - 355679 + T 73 -3.5 -5.57888 | opp_overlap 355655 355660 355661, overlap 355655 355661 AAAGAATAACTTAAA GCCCTCA TTAATT TGAGGGA TTTTATTTTTTTCAT TERM 535 355661 - 355678 + T 71 -7 -3.91073 | opp_overlap 355661 355660 355655, overlap 355660 355655 AAGAATAACTTAAAG CCCTCA TTAATT TGAGGG ATTTTATTTTTTTCA TERM 536 355706 - 355720 + T 71 -5.8 -4.64763 | opp_overlap 355705, overlap 355714 TCATCCCAAAAACTT TTTTTG ACT CAAAAA TTATTTTTTGGATAA mgtA 358876 - 356060 - | Cation-transporting ATPase A, P type (ATPase, E1-E2 type) TERM 537 356085 - 356095 + g 73 -3.2 -5.4387 | TTGGATTTCTTAGTT GCAT TCA GTGC TTTTTTGATTTCTAT TERM 538 358970 - 358947 - R 90 -6.8 -5.71638 | opp_overlap 358947 358946 TAATAATTAAAAAAA CCAAACTG GCAAAAAT CAGTTTGG CTTCATTTATCTAAA TERM 539 358981 - 358993 + r 70 -4.9 -4.77216 | TTTGGCTTCATTTAT CTAAA TTT TTTAG TTTTTAAGTATTATT ileS 361993 - 359303 - | Isoleucyl-tRNA synthetase TERM 540 359809 - 359821 + g 70 -4.9 -4.72846 | GAATCATTTTTCTTT CAAAA CTG TTTTG TTTTTCAATATATAA TERM 541 360214 - 360231 + g 82 -2.7 -5.95166 | AAGGATCGATGACGT TGCCTAA AGAT TTAGACA TTTTTTTTCCTTGAC PAa_0347 363124 - 362033 - | Putative GTPase, probable translation factor engC 364243 - 363311 - | GTPase EngC TERM 542 363977 - 363964 - G 74 -2.4 -5.68438 | TTACCAAAGAAAAAA CCAA TAATAC TTGG TCAATGTTTGCAATA TERM 543 364584 - 364565 - R 100 -10.8 -5.92399 | opp_overlap 364565 TAATAAAATAAAAAA GACCAACT TAAA AGTTGGTC TTTGATAAAAATTTT TERM 544 364565 - 364584 + r 91 -10.8 -3.75863 | opp_overlap 364565 TAATAAAATAAAAAA GACCAACT TAAA AGTTGGTC TTTGATAAAAATTTT PAa_0349 365281 - 364688 - | hypothetical protein PAa_0350 365688 - 365311 - | hypothetical protein TERM 545 365748 - 365760 + r 80 -2.7 -6.09196 | TAATTGGGGAGATGA TGTTT TTT AGACA TTTTTTTGTTTTAAA TERM 546 365797 - 365761 - R 73 -9.1 -2.87344 | opp_overlap 365763, overlap 365780 GATGTTTTTTAGACA TTTTTTTGTTTTAAAAA TAT TCTTTAAAACTAAAAAA ATATAGATAATTTCA TERM 547 366071 - 366049 - R 90 -10 -3.72989 | overlap 366052 AAATGTACAGTGAAA CAACCTCTTT TTA AAAAAGGTTG CAGTTGATTTTATCA PAa_0351 367061 - 366099 - | Putative phage integrase TERM 548 366319 - 366344 + g 72 -4.9 -4.84219 | GCTTTGCTGGACATG CTGATTAAAAG GCTT TTTTTAATTAG TTTATTTTGTACTTT TERM 549 367836 - 367862 + r 80 -6.7 -4.93877 | gap 1, overlap 367838 TGTAATTTTTGTTAA T-GTTGGGGTTG ATTT CAACCCCAATTA TTTTATTTGGTGGAA TERM 550 367838 - 367859 + r 100 -13.1 -4.56436 | overlap 367836 TAATTTTTGTTAATG TTGGGGTTG ATTT CAACCCCAA TTATTTTATTTGGTG TERM 551 368490 - 368505 + r 91 -10.4 -3.4968 | overlap 368465 368487 GTTTATGCTTTATCT GAGCCC TTGA GGGCTC TTAGATTTTTCTCAT PAa_0354 369422 - 368817 - | hypothetical protein TERM 552 369245 - 369278 + g 73 -4.5 -5.0538 | gap 1, overlap 369248 AAAGAATTTGATTTT TAGGGCGGTAGTTCGC TTC GCGA-TAACCGCCTTC TTTTTTAGAGTGGGG TERM 553 369248 - 369275 + g 83 -8.4 -4.63089 | gap 1, overlap 369245 GAATTTGATTTTTAG GGCGGTAGTTCGC TTC GCGA-TAACCGCC TTCTTTTTTAGAGTG TERM 554 369525 - 369510 - R 100 -9 -5.95539 | opp_overlap 369507 369510 369512 TGGTAAAGAAAAAAA GACCCT TGAA AGGGTC TGATGTTTAGTTAGT TERM 555 369510 - 369525 + r 73 -9 -2.906 | opp_overlap 369510, overlap 369507 369512 TGGTAAAGAAAAAAA GACCCT TGAA AGGGTC TGATGTTTAGTTAGT PAa_0356 370598 - 370011 - | hypothetical protein TERM 556 370595 - 370562 - G 79 -9.7 -3.21934 | opp_overlap 370571, overlap 370571 TTTGTGTGAGAAAAT CAAAAAAAAGACCCT TGAA AGGGTCTTTTTGGTG CATTATTTATCTTCG TERM 557 370586 - 370571 - G 100 -9 -6.07969 | opp_overlap 370571, overlap 370562 GAAAATCAAAAAAAA GACCCT TGAA AGGGTC TTTTTGGTGCATTAT TERM 558 370571 - 370586 + g 93 -9 -4.77759 | opp_overlap 370571 370562 GAAAATCAAAAAAAA GACCCT TGAA AGGGTC TTTTTGGTGCATTAT PAa_0357 370886 - 370602 - | hypothetical protein PAa_0358 371727 - 370915 - | hypothetical protein PAa_0359 372403 - 371792 - | hypothetical protein TERM 559 372494 - 372482 - R 70 -3.3 -5.33405 | opp_overlap 372482 372483, overlap 372483 GGGATTAAAGAAAAA GCCCT TAA AGGGA TTGTGGTTGATTGAA PAa_0360 374372 - 372576 - | DNA primase TERM 560 372785 - 372809 + g 75 -5.7 -4.65895 | TCCTTTTGATTACTT CGCGAGTTTCA GAG TCGAATTCGCG TTTTTCGCTCCAACA TERM 561 373471 - 373453 - G 77 -3.1 -5.59357 | opp_overlap 373447 373453 ATTACATCAAAAAAA CCTTCAT GGATA ATGACGG TTTTTGCTTGTTTGA TERM 562 373801 - 373842 + g 73 -4.3 -5.0666 | opp_overlap 373798 373806 TTATCGGATAGAGGA GCGAACCCCAGGCTGAATT CTTT AATTGTGGCTGGGGTGAGC TTTCTTTTTTCGGTC dnaB 375883 - 374384 - | Replicative DNA helicase PAa_0362 376505 - 375900 - | hypothetical protein PAa_0363 376609 - 376499 - | hypothetical protein TERM 563 376591 - 376576 - GR 100 -9 -5.42198 | opp_overlap 376578 TGGTAAAAAAGAAAA GACCCT TAAA AGGGTC TGTGGGTGGTTTTAG PAa_0364 376727 - 376581 - | hypothetical protein tmk 377344 - 376715 - | Thymidylate kinase TERM 564 377399 - 377382 - R 100 -9.9 -5.37593 | opp_overlap 377382 TTTTAAATGAAAAAA GACCTTC GCGA GAAGGTC TTTAGCGTTATTCTG TERM 565 377382 - 377399 + r 90 -9.9 -3.73122 | opp_overlap 377382 TTTTAAATGAAAAAA GACCTTC GCGA GAAGGTC TTTAGCGTTATTCTG PAa_0366 378927 - 377407 - | hypothetical protein TERM 566 379417 - 379398 - R 84 -4.9 -5.64274 | opp_overlap 379398, overlap 379400 TTAGGTATAAAAAAA GACCCCT AGTTAA AGGGGAC TAAATTAGATTAAAA TERM 567 379415 - 379400 - R 72 -6.1 -4.46105 | opp_overlap 379398, overlap 379398 AGGTATAAAAAAAGA CCCCT AGTTAA AGGGG ACTAAATTAGATTAA TERM 568 379775 - 379792 + r 87 -9.9 -3.30006 | opp_overlap 379775 GAAAAAATAAAAAAA GACCTTC ATTA GAAGGTC TTAATATCAATTAAT TERM 569 379792 - 379775 - R 100 -9.9 -6.28401 | opp_overlap 379775 GAAAAAATAAAAAAA GACCTTC ATTA GAAGGTC TTAATATCAATTAAT TERM 570 381434 - 381418 - R 90 -6.5 -5.68039 | opp_overlap 381420 AAAGGGATAAAAAAA GACCCTT TAT AGGGGTC TTGGGGTTGTGATTA PAa_0369 381923 - 381459 - | hypothetical protein TERM 571 381654 - 381666 + g 74 -4.9 -5.04356 | opp_overlap 381654 TTTTATATCATAAAT TCTTT GAT AAAGA TTTTTAATTATTTGA TERM 572 382736 - 382772 + H 100 -10.5 -5.71712 | opp_overlap 382728 382736 382764 AGAACAACAAATTTA TCCAAATTGTTTATT AATTAAA AATAAACAGTTTGGA TTTTTTTGTATCCAA TERM 573 382791 - 382764 - H 91 -8.6 -4.96773 | opp_overlap 382736, overlap 382736 382728 TTAATTAAAAATAAA CAGTTTGGAT TTTTTTGT ATCCAAACTG AGAAAAAGGAGTTTG PAa_0371 382811 - 384094 + | Replicative DNA helicase, prophage PAa_0372 384117 - 384749 + | hypothetical protein TERM 574 384826 - 384814 - g 79 -3.5 -5.66868 | AATGAATTAAAAAAA TATTT TGA AAATA AAGGCTATCAAATCA tmk 384739 - 385386 + | Thymidylate kinase PAa_0374 385406 - 385582 + | hypothetical protein PAa_0375 385663 - 386118 + | hypothetical protein himA 386111 - 386428 + | DNA-binding protein HU TERM 575 386494 - 386475 - g 72 -6.6 -4.15029 | AGTTGATAGAAATAA TTTTTTCA AAAA TGAAAAAA AAGCTACTATTTATA TERM 576 386988 - 387001 + G 70 -5.3 -4.53777 | opp_overlap 386986 386988 TAGTCTTCCCAAAGA CGTTT TTGA AAACG TTGTTTTTCATTCAG PAa_0377 386452 - 387090 + | Putative N6 adenine-specific DNA methyltransferase, probably truncated PAa_0379 387522 - 387962 + | hypothetical protein TERM 577 388025 - 388043 + G 77 -6.2 -4.72029 | CTTTAATGTTTATCA TTAAAAAA ATC TTTTTTAA TTTTGTTCCATTGCC PAa_0380 387955 - 388191 + | hypothetical protein TERM 578 389177 - 389159 - g 74 -6.8 -4.29621 | overlap 389162 389175 GATAAACAAATTAAA CAACTTCA AAA TGAAATTG AAGCAATCAAAAACC TERM 579 389952 - 389917 - g 71 -7 -3.76815 | gap 1, opp_overlap 389924 389927, overlap 389918 ATTCAAAACCCTAAA CCCAAACCATGAAGTCA TGT TGCCTTC-TGATTTGGA TGAAGTAATTGACAC PAa_0381 388394 - 390520 + | Putative IMP dehydrogenase/GMP reductase TERM 580 390791 - 390756 - g 79 -4.9 -5.37593 | GTTGAAACCAAAAAA GACAATTGTTTTG TAAAATTAAT CAAATCAATTGTC AAAATAACCCTTATT TERM 581 391311 - 391297 - g 72 -7.2 -3.89307 | AAACAACAAAATCAA CTGAAT TAA ATTCAG AAACCCTAACTCCTC TERM 582 392422 - 392404 - g 83 -7.5 -4.77216 | AACAACATGTAAAAA CTTTGGA AGAAA TCCAAAG ACAAATTACAAATTA PAa_0382 390537 - 394031 + | hypothetical protein TERM 583 394025 - 394054 + F 75 -8.8 -3.25072 | gap 1, overlap 394020 TAAAACATGGTTTGG TC-GGTAATGCAA TTTTT TTGCATTACCAGA TTAGATTATGATACA TERM 584 394378 - 394358 - g 77 -6.3 -4.79953 | AGAAGAAGAAATAAA TTCAATTCA AAC TGAATTAAA CCAAAAACAAGCAGA TERM 585 394887 - 394871 - g 70 -5.1 -4.72272 | GCCGTTTATGAAAAA CCCTTTT GAC AAATGGG AACATAAACCTTCAA PAa_0383 394113 - 395204 + | hypothetical protein TERM 586 395305 - 395272 - f 95 -10.7 -4.20042 | gap 1, opp_overlap 395272, overlap 395275 395283 ATTAATATTTTAAAA CAACAATAAAA-CTTT TTA AAAGATTTTATTGTTG TTTTTTTTATAAAAC TERM 587 395272 - 395305 + F 100 -10.7 -5.93809 | gap 1, opp_overlap 395272 395275 395283 ATTAATATTTTAAAA CAACAATAAAA-CTTT TTA AAAGATTTTATTGTTG TTTTTTTTATAAAAC TERM 588 395302 - 395275 - f 73 -6.6 -4.2142 | gap 1, opp_overlap 395272, overlap 395272 395283 AATATTTTAAAACAA CAATAAAA-CTTT TTA AAAGATTTTATTG TTGTTTTTTTTATAA PAa_0384 395386 - 396555 + | Putative phage integrase TERM 589 396812 - 396834 + T 73 -5.8 -4.87626 | overlap 396814 ATTTTTAGATTATTA TGTAAAAAAA TTA TTTTTTTATA TTTTTAGTATTGACA TERM 590 396940 - 396886 - T 100 -17.8 -3.66541 | opp_overlap 396888 396894 396898 396902, overlap 396873 396888 396894 396898 396902 AATATATATGGTAAA TATATAAAGAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTCTTTATATT ACATATACATATATT TERM 591 396938 - 396888 - T 100 -20.4 -3.40558 | opp_overlap 396888 396894 396898 396902, overlap 396873 396886 396894 396898 396902 TATATATGGTAAATA TATAAAGAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTCTTTATA TTACATATACATATA TERM 592 396888 - 396938 + T 100 -20.4 -3.14026 | opp_overlap 396873 396886 396888 396894 396898 396902, overlap 396894 396898 396902 TATATATGGTAAATA TATAAAGAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTCTTTATA TTACATATACATATA TERM 593 396894 - 396932 + T 100 -15 -4.22678 | opp_overlap 396888 396886 396894 396898 396902, overlap 396888 396898 396902 TGGTAAATATATAAA GAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTC TTTATATTACATATA TERM 594 396932 - 396894 - T 100 -15 -4.27886 | opp_overlap 396894 396888 396898 396902, overlap 396888 396886 396898 396902 TGGTAAATATATAAA GAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTC TTTATATTACATATA TERM 595 396928 - 396898 - T 100 -10 -4.69487 | opp_overlap 396898 396894 396888 396902, overlap 396894 396888 396886 396902 AAATATATAAAGAAA GAAATAAAAACTTT TGA ATAGTTTTTATTTC TTTCTTTATATTACA TERM 596 396898 - 396928 + T 100 -10 -4.68511 | opp_overlap 396894 396888 396886 396898 396902, overlap 396894 396888 396902 AAATATATAAAGAAA GAAATAAAAACTTT TGA ATAGTTTTTATTTC TTTCTTTATATTACA TERM 597 396924 - 396902 - T 70 -5 -4.84602 | opp_overlap 396898 396894 396888 396902, overlap 396898 396894 396888 396886 ATATAAAGAAAGAAA TAAAAACTTT TGA ATAGTTTTTA TTTCTTTCTTTATAT TERM 598 396902 - 396924 + T 70 -5 -4.84602 | opp_overlap 396902 396898 396894 396888 396886, overlap 396898 396894 396888 ATATAAAGAAAGAAA TAAAAACTTT TGA ATAGTTTTTA TTTCTTTCTTTATAT TERM 599 396978 - 397000 + T 72 -3.6 -5.4505 | opp_overlap 396962, overlap 396962 396960 TAAATAATATTATTA TTTTATACTT ATA AAATATAAAA TTTTTTCTTCAAAAA TERM 600 397262 - 397307 + T 75 -8.7 -3.14552 | gap 1, opp_overlap 397269, overlap 397261 397269 ATTTATTTACCTTTC TTG-ATAATGGTGATAATTAAT CAT ATCACTTATCACCATTATACAA CTTTATTAATAAAAT TERM 601 397299 - 397269 - T 80 -9.2 -3.28924 | opp_overlap 397269 397262 397261 TACCTTTCTTGATAA TGGTGATAATTAAT CAT ATCACTTATCACCA TTATACAACTTTATT PAa_0385 398960 - 397338 - | hypothetical protein TERM 602 399978 - 400001 + r 82 -8.4 -4.49364 | opp_overlap 399995 GGTTGGGGGGGGATT TTATTTCTTT TTTT AAAGAAATAA TTTCTTCTTCGGTTT TERM 603 400185 - 400158 - R 95 -13 -3.53091 | opp_overlap 400158, overlap 400161 ATTTCCTTTCTCAAA TAAGACTAAGTT AAAA AACTTAGTCTTA TTTCTTTTAATTAAG TERM 604 400158 - 400185 + r 100 -13 -4.78077 | opp_overlap 400158 400161 ATTTCCTTTCTCAAA TAAGACTAAGTT AAAA AACTTAGTCTTA TTTCTTTTAATTAAG TERM 605 400182 - 400161 - R 95 -10.3 -3.90744 | opp_overlap 400158, overlap 400158 TCCTTTCTCAAATAA GACTAAGTT AAAA AACTTAGTC TTATTTCTTTTAATT TERM 606 400196 - 400212 + r 74 -5.2 -5.10933 | overlap 400193 TCTTATTTCTTTTAA TTAAGC TAATT GCTTAA TTTTGTTTTCAATAG PAa_0388 400726 - 400196 - | hypothetical protein PAa_0389 401151 - 400828 - | hypothetical protein PAa_0390 401403 - 401170 - | hypothetical protein TERM 607 401333 - 401315 - G 77 -6.2 -4.72029 | GGCAATGGAAGAAAA TTAAAAAA GAT TTTTTTAA TGATAAACATTAAAG PAa_0391 401836 - 401396 - | hypothetical protein TERM 608 401602 - 401614 + g 71 -2.7 -5.4505 | TGGCATTTTGGATTT CTAAG TTT TTTAG TTTTTTGTTGGGGAA PAa_0393 402310 - 402041 - | hypothetical protein PAa_0394 402539 - 402339 - | hypothetical protein #pseudo 402940 - 402545 - | Putative RNA polymerase sigma factor,fragment PAa_0396 403386 - 402946 - | hypothetical protein TERM 609 403152 - 403164 + g 71 -2.7 -5.4505 | TGGCATTTTGGATTT CTAAG TTT TTTAG TTTTTTGTTGGGGAA TERM 610 403429 - 403413 - R 78 -4.4 -5.60993 | opp_overlap 403413 TTCTTCATAAAAAAA GACCAT TTTGG ATGGCC TTTGATTTGAGTTTT himA 403834 - 403547 - | Bacterial nucleoid DNA-binding protein TERM 611 404093 - 404071 - R 79 -8.5 -4.14392 | gap 1, opp_overlap 404071 404071, overlap 404075 TGCGAATTGGTAAAA CCAAGACCCT TGAA AGGGTC-TGG AGTTAGTTAGTTGAT TERM 612 404090 - 404075 - R 79 -9 -3.68023 | opp_overlap 404071 404071, overlap 404071 AATTGGTAAAACCAA GACCCT TGAA AGGGTC TGGAGTTAGTTAGTT PAa_0398 404509 - 404228 - | hypothetical protein PAa_0399 405175 - 404540 - | Putative phage-related protein (endonuclease) TERM 613 406103 - 406122 + r 71 -6.6 -4.15029 | GTATAAATAGTAGCT TTTTTTCA TTTT TGAAAAAA TTATTTCTATCAACT TERM 614 406202 - 406217 + r 71 -5.4 -4.69549 | GCCAAAACATTTTCT TCCTAC GAAT GTGGGA TTTTCCTTTTGAATT gepA 406818 - 406468 - | Uncharacterized phage-associated protein TERM 615 406892 - 406877 - R 75 -4 -5.60993 | opp_overlap 406880 TTGGTTAGAAAAAAA GACCTT TGAA AAAGTC TTATTGTTTGTTTTC PAa_0402 407183 - 406893 - | hypothetical protein gepA 407859 - 407380 - | Uncharacterized phage-associated protein PAa_0404 408443 - 407886 - | Uncharacterized phage-associated protein TERM 616 407972 - 407996 + g 71 -8.1 -3.28261 | TTTCTAAAAGTTTAT GATTTGAAAAA AAG TTTTTTAAATC TTCATCTGAAATTGT TERM 617 408437 - 408447 + g 73 -5.4 -4.79053 | overlap 408427 TCGTTTGTTTCATTT GGAA CAT TTCC TTTCTTTTGGTATTT PAa_0405 408804 - 408523 - | hypothetical protein PAa_0406 409067 - 408861 - | hypothetical protein TERM 618 409149 - 409179 + r 100 -12.1 -5.46706 | gap 1, opp_overlap 409154, overlap 409154 AATGGGGTTTTACAA GAA-AAGACCGCTA AAAA TAGCGGTCTTATTC TTTTTCTTTTCCCAT TERM 619 409154 - 409173 + r 100 -12.2 -4.42156 | opp_overlap 409154, overlap 409149 GGTTTTACAAGAAAA GACCGCTA AAAA TAGCGGTC TTATTCTTTTTCTTT TERM 620 409173 - 409154 - R 100 -12.2 -4.77165 | opp_overlap 409149 409154 GGTTTTACAAGAAAA GACCGCTA AAAA TAGCGGTC TTATTCTTTTTCTTT PAa_0407 409971 - 409174 - | hypothetical protein TERM 621 410106 - 410123 + r 74 -8.3 -3.42768 | opp_overlap 410106 TTTGTTAAAGAGAAA GGCCCGC TAGC GCGGACC TTGTGAAATTTTGAT TERM 622 410123 - 410106 - R 95 -10.5 -4.32857 | opp_overlap 410106 TTTGTTAAAGAGAAA GGCCCGC TAGC GCGGACC TTGTGAAATTTTGAT PAa_0408 410517 - 410206 - | Single-strand DNA-binding protein of phage fliA 411192 - 410521 - | Putative DNA-directed RNA polymerase,specialized sigma subunit TERM 623 410887 - 410901 + g 71 -4.2 -5.15634 | GTTTTGCCGAGGCAT TGCTGC TTG GTGGCA TTTTTTAATGAGGTC TERM 624 411290 - 411269 - H 88 -6.6 -5.60993 | TTGGGTACAAAAAAA GACCGACT AAAATA AGTCAGTC TTAAAGAATTTTTAA TERM 625 411520 - 411481 - H 70 -2.5 -5.56112 | gap 1, opp_overlap 411483 411485 411488, overlap 411482 411484 411485 411488 ATAAAAATTAAAAAA CCACTAATTATTGCTATT GCAAT AATAGCAATAATTA-TAT ATTTTTTTATTATTT TERM 626 411483 - 411519 + H 74 -6.1 -4.59954 | opp_overlap 411482 411481 411484 411485 411488, overlap 411485 411488 AAAAATTAAAAAACC ACTAATTATTGCTATTG CAA TAATAGCAATAATTATA TATTTTTTTATTATT TERM 627 411518 - 411484 - H 79 -8.9 -3.48747 | opp_overlap 411483 411485 411488, overlap 411482 411481 411485 411488 AAAATTAAAAAACCA CTAATTATTGCTATT GCAAT AATAGCAATAATTAT ATATTTTTTTATTAT TERM 628 411485 - 411517 + H 100 -13.1 -3.85421 | opp_overlap 411485 411484 411482 411481 411488, overlap 411483 411488 AAATTAAAAAACCAC TAATTATTGCTATTG CAA TAATAGCAATAATTA TATATTTTTTTATTA TERM 629 411517 - 411485 - H 88 -12.4 -2.66808 | opp_overlap 411483 411485 411488, overlap 411484 411482 411481 411488 AAATTAAAAAACCAC TAATTATTGCTATT GCAAT AATAGCAATAATTA TATATTTTTTTATTA TERM 630 411514 - 411488 - H 82 -9.7 -3.4486 | opp_overlap 411488 411485 411483, overlap 411485 411484 411482 411481 TTAAAAAACCACTAA TTATTGCTATT GCAAT AATAGCAATAA TTATATATTTTTTTA TERM 631 411488 - 411514 + H 95 -10.4 -3.97983 | opp_overlap 411485 411484 411482 411481 411488, overlap 411485 411483 TTAAAAAACCACTAA TTATTGCTATTG CAA TAATAGCAATAA TTATATATTTTTTTA PAa_0410 412345 - 412875 + | hypothetical protein TERM 632 412875 - 412859 - T 72 -5.2 -5.07652 | overlap 412864 CTGTTGAAAACAAAA TTAAGC AATTA GCTTAA TTAAAAGAAATAAGA TERM 633 412913 - 412886 - T 100 -13 -4.78077 | opp_overlap 412886 412889 CTTAATTAAAAGAAA TAAGACTAAGTT TTTT AACTTAGTCTTA TTTGAGAAAGGAAAT TERM 634 412886 - 412913 + T 95 -13 -3.53091 | opp_overlap 412886, overlap 412889 CTTAATTAAAAGAAA TAAGACTAAGTT TTTT AACTTAGTCTTA TTTGAGAAAGGAAAT TERM 635 412889 - 412910 + T 95 -10.3 -3.90744 | opp_overlap 412886, overlap 412886 AATTAAAAGAAATAA GACTAAGTT TTTT AACTTAGTC TTATTTGAGAAAGGA TERM 636 413294 - 413272 - T 72 -3.6 -5.4505 | opp_overlap 413272 413277 CTTTTTAAGAAAAAA TTTTATATTT TAT AAGTATAAAA TAATATTATATTTGT TERM 637 413344 - 413322 - T 73 -5.8 -4.87626 | overlap 413324 TGTCAATACTAAAAA TATAAAAAAA TAA TTTTTTTACA TAATAATCTAAAAAT TERM 638 414841 - 414875 + T 89 -9.6 -4.2243 | opp_overlap 414841 TTTAATTAAAAAAAA CAACAATAAAATCTTT TTA AGAAATTTTATTGTTG TTTTAAAATATTTAT TERM 639 414875 - 414841 - T 100 -9.6 -5.95166 | opp_overlap 414841 TTTAATTAAAAAAAA CAACAATAAAATCTTT TTA AGAAATTTTATTGTTG TTTTAAAATATTTAT TERM 640 416059 - 416030 - T 75 -8.8 -3.25072 | gap 1, overlap 416025 TGTATCATAATCCAA TCTGGTAATGCAA AAAAA TTGCATTACC-GA CCAAACCATGTTTTA PAa_0416 419547 - 416053 - | hypothetical protein TERM 641 417662 - 417680 + g 83 -7.5 -4.77216 | TAATTTGTAATTTGT CTTTGGA TTTCT TCCAAAG TTTTTACATGTTGTT PAa_0417 421737 - 419596 - | Putative IMP dehydrogenase/GMP reductase TERM 642 420954 - 420972 + g 74 -6.8 -4.29621 | overlap 420944 420951 GGTTTTTGATTGCTT CAATTTCA TTT TGAAGTTG TTTAATTTGTTTATC PAa_0418 422174 - 421938 - | hypothetical protein TERM 643 422104 - 422086 - G 77 -6.2 -4.72029 | GGTAATGGAAGAAAA TTAAAAAA GAT TTTTTTAA TGATAAACATTAAAG PAa_0419 422607 - 422167 - | hypothetical protein TERM 644 422647 - 422661 + r 70 -3.6 -5.21459 | overlap 422649 TTTAATAACTTTTCT TTGTTT TTT AAACGA TTTCTTTTTGTTTTT PAa_0420 422811 - 422623 - | hypothetical protein PAa_0421 423611 - 422934 - | Putative N6 adenine-specific DNA methyltransferase TERM 645 423075 - 423062 - G 70 -5.3 -4.53777 | opp_overlap 423062 423060 CTGAATGAAAAACAA CGTTT TCAA AAACG TCTTTGGGAAGACTA TERM 646 423569 - 423588 + g 72 -6.6 -4.15029 | TATAAATAGTAGCTT TTTTTTCA TTTT TGAAAAAA TTATTTCTATCAACT himA 423926 - 423636 - | DNA-binding protein HU PAa_0423 424380 - 423919 - | hypothetical protein PAa_0424 424637 - 424461 - | hypothetical protein tmk 425304 - 424657 - | Thymidylate kinase PAa_0426 425926 - 425294 - | hypothetical protein TERM 647 427252 - 427279 + H 91 -8.6 -4.96773 | opp_overlap 427271, overlap 427263 427271 CAAACTCCTTTTTCT CAGTTTGGAT ACAAAAAA ATCCAAACTG TTTATTTTTAATTAA TERM 648 427307 - 427271 - H 100 -10.5 -5.71712 | opp_overlap 427252 427263 427271 TTGGATACAAAAAAA TCCAAACTGTTTATT TTTAATT AATAAACAATTTGGA TAAATTTGTTGTTCT PAa_0430 428211 - 428843 + | hypothetical protein TERM 649 428920 - 428908 - f 77 -3.5 -5.66868 | AATGAATTAAAAAAA TATTT TGA AAATA AAGGCTATCAAATCA tmk 428912 - 429499 + | Thymidylate kinase himA 429496 - 429786 + | DNA-binding protein HU TERM 650 429852 - 429833 - g 72 -6.6 -4.15029 | AGTTGATAGAAATAA TTTTTTCA AAAA TGAAAAAA AAGCTACTATTTATA TERM 651 430346 - 430359 + G 70 -5.3 -4.53777 | opp_overlap 430344 430346 TAGTCTTCCCAAAGA CGTTT TTGA AAACG TTGTTTTTCATTCAG PAa_0433 429810 - 430487 + | Putative N6 adenine-specific DNA methyltransferase TERM 652 430792 - 430778 - g 91 -7.2 -5.21459 | AAAAACAAAAAGAAA TCGTTT AAA AAACGA AGAAAAGTTATTAAA PAa_0434 430628 - 430816 + | hypothetical protein PAa_0435 430832 - 431272 + | hypothetical protein TERM 653 431335 - 431353 + G 77 -6.2 -4.72029 | CTTTAATGTTTATCA TTAAAAAA ATC TTTTTTAA TTTTCTTCCATTACC PAa_0436 431265 - 431501 + | hypothetical protein TERM 654 432496 - 432478 - f 73 -6.8 -4.29621 | overlap 432481 432494 GATAAACAAATTAAA CAACTTCA AAA TGAAATTG AAGCAATCAAAAACC PAa_0438 432859 - 434622 + | Restriction enzyme alpha subunit PAa_0439 434609 - 435067 + | hypothetical protein TERM 655 435594 - 435618 + F 95 -5 -6.47325 | gap 1, opp_overlap 435596, overlap 435597 435598 TTTTTTAACCTAATT TAGACCCCCTC ATTT GAGGGGGA-TA TTTTTTTTATTTTTT TERM 656 435597 - 435616 + F 95 -9.2 -4.77908 | opp_overlap 435596, overlap 435594 435598 TTTAACCTAATTTAG ACCCCCTC ATTT GAGGGGGA TATTTTTTTTATTTT TERM 657 435598 - 435615 + F 95 -12.7 -3.41254 | opp_overlap 435596, overlap 435597 435594 TTAACCTAATTTAGA CCCCCTC ATTT GAGGGGG ATATTTTTTTTATTT PAa_0440 435767 - 436168 + | Transposase, fragment TERM 658 436965 - 436980 + F 100 -9 -5.97575 | opp_overlap 436967 TAATCACAACCCCAA GACCCT ATAA AGGGTC TTTTTTTTATCCCTT TERM 659 438001 - 437967 - g 71 -8.7 -2.82317 | overlap 437964 437963 CAAACAACAAACTTA CACCATTGAAGATTT ATTGA AACTCTCCAATGGCG CCAAAAACATCTATC PAa_0442 437098 - 438582 + | hypothetical protein TERM 660 438588 - 438607 + F 100 -7.8 -5.82316 | opp_overlap 438589, overlap 438589 TATTAATTGATATTA AGACCTCC AAAT GGAGGTCA TTTTTTTTGGCTCAT TERM 661 438606 - 438589 - f 93 -11.3 -3.30006 | opp_overlap 438589 438588 ATTAATTGATATTAA GACCTCC AAAT GGAGGTC ATTTTTTTTGGCTCA TERM 662 438589 - 438606 + F 100 -11.3 -4.07763 | opp_overlap 438589, overlap 438588 ATTAATTGATATTAA GACCTCC AAAT GGAGGTC ATTTTTTTTGGCTCA TERM 663 438964 - 438984 + F 100 -11.2 -5.63857 | opp_overlap 438964 TTTAAACCTAATTTA TACCCCCT TGTTT AGGGGGTA TTTTTTTCACTTTTT TERM 664 438984 - 438964 - f 83 -11.2 -2.58812 | opp_overlap 438964 TTTAAACCTAATTTA TACCCCCT TGTTT AGGGGGTA TTTTTTTCACTTTTT PAa_0445 440610 - 440792 + | hypothetical protein TERM 665 440845 - 440860 + F 70 -3.4 -5.34309 | overlap 440854 TCGAAACTGCAAGCC TATTTT TATT AAAATA TTTTTATTTAATAAT TERM 666 442962 - 442951 - g 70 -2.2 -5.50313 | GACAAAATTAAAAAA GATG CTGA CACC CAAATCAAATTAGAT TERM 667 443202 - 443191 - g 70 -2.2 -5.50313 | GACAAAATTAAAAAA GATG CTGA CACC CAAATCAAATTAGAT PAa_0446 441034 - 443637 + | hypothetical protein TERM 668 443664 - 443697 + T 84 -9.1 -4.37013 | opp_overlap 443673, overlap 443673 443692 AGAAAAATAAAATAA TGAAAAAAACCATCT TTTT AGATGGTTTTTATTA TTTTAATGATTCATT TERM 669 443688 - 443673 - T 100 -7.6 -5.73672 | opp_overlap 443673 443664 AAATAATGAAAAAAA CCATCT TTTT AGATGG TTTTTATTATTTTAA TERM 670 443673 - 443688 + T 100 -7.6 -5.4593 | opp_overlap 443673, overlap 443664 AAATAATGAAAAAAA CCATCT TTTT AGATGG TTTTTATTATTTTAA PAa_0448 444633 - 444382 - | Putative endonuclease IV, fragment PAa_0449 445957 - 444659 - | ATP-dependent RNA helicase, DEAD-DEAH box family TERM 671 446195 - 446226 + r 100 -9 -6.18768 | AATAATCTTAGTTTT TTCATATTTTGTTG AATG CAATAAGATATGAA TTTTTTTTCTATTTT artM 448422 - 446683 - | Amino acid ABC transporter permease component TERM 672 447396 - 447371 - G 70 -6.3 -4.16921 | opp_overlap 447370 447371 447376 TAAGAAGGTGCAAAA GCAATTATTTT CTTA AAAATATTTGC GTTTTGTTCGATTCT TERM 673 448529 - 448499 - R 87 -6.4 -5.27335 | overlap 448482 TTTTTGAAACAAAAA TTATCTTGTAAAAA ATT CTTTTAAAAGATAA AATAAAATTTAGATG ribF 449493 - 448579 - | Putative riboflavin kinase TERM 674 449625 - 449610 - H 73 -3.4 -5.60993 | opp_overlap 449610 TGTTTTACAAAAAAA TAATTT TTTT AAATTA TTAATTAATGAAAAA TERM 675 449761 - 449751 - g 74 -2.6 -5.61881 | opp_overlap 449751, overlap 449745 TTTTAAAAACAAAAA TAAT ACT ATTA TTTATGTTGGCAAAG TERM 676 450045 - 450035 - g 73 -3.2 -5.41143 | CACGTTTTAAAAAAA TCCC CCC AGGA AAAGTTCTTTTCGGA TERM 677 450288 - 450278 - g 78 -2.6 -5.78622 | overlap 450263 TTATTTTAAAAAAAA TAAA ACT TTTA ATGCAAGAAGCAAGT uvrC 449680 - 451473 + | Nuclease subunit of the excinuclease complex TERM 678 452054 - 452071 + F 73 -2.1 -5.75945 | TTTTGTTTGGCGTCT TTGTTAT TCAG ATAATAA TTTTTTTTAAAAACT TERM 679 453522 - 453510 - g 72 -4.8 -4.86862 | opp_overlap 453510 CCCAAAAAATTAAAA TGCG TACTT CGCA TGATTTGGAAATGTT uvrB 452651 - 454642 + | Helicase subunit of the DNA excision repair complex nlpA 455152 - 455985 + | ABC-type uncharacterized transport system, periplasmic component PAa_0455 456017 - 456907 + | Putative ABC-type metal ion transport system, periplasmic component/surface antigen (may be involved in bacterial virulence) TERM 680 457474 - 457450 - g 71 -4.5 -4.87803 | CATCTTTAAATAAAA TTAATCATT TTTGCGC AATGATTAA CAAAAAAGCTTATGA iscU 457305 - 457604 + | NifU homolog involved in Fe-S cluster formation TERM 681 457717 - 457698 - g 95 -7.2 -5.53288 | opp_overlap 457698 TGCAAGTTAAAAAAA GACTAACT CAAA AGCTAGTC TTAAATATAAAAATT PAa_0457 457682 - 457921 + | hypothetical protein TERM 682 457915 - 457971 + F 79 -9.1 -3.68324 | opp_overlap 457932, overlap 457904 457899 457932 AGGGCACTTTTTATT TTTTTAAAAAAAATTAAGACTGACTTA TTT TTAGTCGGTCTTTTTTTGTTTTAAAAA TATTTATTAAAACTA TERM 683 457932 - 457954 + F 100 -7 -6.09196 | opp_overlap 457932, overlap 457904 457899 457915 TTTAAAAAAAATTAA GACTGACTTA TTT TTAGTCGGTC TTTTTTTGTTTTAAA TERM 684 458227 - 458213 - f 86 -3.6 -6.02919 | TTACAAATAAAAAAA CAAGTT TAA AACTTA GTAAATTAATTTTAC PAa_0458 458544 - 458993 + | hypothetical protein TERM 685 459093 - 459110 + F 93 -9.9 -3.96093 | opp_overlap 459093 TTTAAATGAAAAAAA GACCTTC GTTG GAAGGTC TTTGGTGTTAATCTG TERM 686 459110 - 459093 - f 100 -9.9 -5.72207 | opp_overlap 459093 TTTAAATGAAAAAAA GACCTTC GTTG GAAGGTC TTTGGTGTTAATCTG PAa_0460 459860 - 460321 + | hypothetical protein TERM 687 460318 - 460299 - T 100 -10.8 -5.63517 | overlap 460292 TTGGTAAAGAAAAAA GACCCTTT TTTA AAAGGGTC TGAGGGGGTTGAGTG PAa_0461 461077 - 460490 - | hypothetical protein TERM 688 462344 - 462360 + r 77 -8.7 -3.45788 | opp_overlap 462344 462343 462338, overlap 462343 462330 TTCCAATAATAAAAT CATCTGC GTA GCGGATG TATTCTATTCTCGGG TERM 689 462394 - 462417 + r 71 -6.8 -4.04185 | overlap 462392 GGGTTCAGGTTTATT TCACTATCTA TTGA TAGATTGTGA TGTTGTTTTTTTGTG TERM 690 463253 - 463241 - R 74 -9.1 -3.02144 | opp_overlap 463240 463239 463236 TTAGTTTTCCTAAGA GCCCT GGG AGGGC AATTATCATTGTTAT PAa_0467 465312 - 464986 - | hypothetical protein TERM 691 465694 - 465720 + r 90 -6.8 -5.71712 | opp_overlap 465693 465696, overlap 465696 TTTTTTTTAATCAAT TATTTCAATTTT TTT AAAATTGAAAAA TTTTTTTATATAAGA TERM 692 465696 - 465718 + r 78 -9.4 -3.00081 | opp_overlap 465693 465696, overlap 465694 TTTTTTAATCAATTA TTTCAATTTT TTT AAAATTGAAA AATTTTTTTATATAA TERM 693 465718 - 465696 - R 76 -9.4 -2.84098 | opp_overlap 465696 465694, overlap 465693 TTTTTTAATCAATTA TTTCAATTTT TTT AAAATTGAAA AATTTTTTTATATAA PAa_0469 466708 - 465707 - | hypothetical protein TERM 694 465805 - 465817 + g 72 -4.9 -4.82128 | GTTGATATTTTGTTT TTTCA TTT TGAAA TTTTATGTTTAATAG TERM 695 466095 - 466109 + g 90 -2.9 -6.23317 | TTTTCACTTTTTATT TGATT AATTA AATCA TTTTTTTCTTTTTGT PAa_0471 468642 - 467077 - | Retron-type reverse transcriptase TERM 696 467778 - 467794 + g 75 -8.7 -3.45788 | opp_overlap 467778 467777 467772, overlap 467777 467764 TTCCAATAATAAAAT CATCTGC GTA GCGGATG TATTCTATTCTCGGG TERM 697 467828 - 467851 + g 70 -6.8 -4.04185 | overlap 467826 GGGTTCAGGTTTATT TCACTATCTA TTGA TAGATTGTGA TGTTGTTTTTTTGTG TERM 698 468739 - 468727 - R 74 -9.1 -3.02144 | opp_overlap 468726 468725 468722 TTAGTTTTCCTAAGA GCCCT GGG AGGGC AATTATCATTGTTAT TERM 699 469832 - 469848 + r 79 -3.7 -5.73339 | CGATTTCTTCTCCTG CTTACCA ATA TGATAAG TTTTTTTCTAATTCT TERM 700 470492 - 470538 + r 72 -6.3 -4.42047 | gap 1, overlap 470492 TTTCATTTGTTTCCA TTTTTCCT-CCTTTTCTAAAAA CGTT TTTTTAGAAAAGATAGAAAAAA TTATTATTTTTTAGT TERM 701 470591 - 470570 - R 100 -9.5 -5.71712 | opp_overlap 470572 TTGGATACAAAAAAA GACCGACTT AAAT AAGTCAGTC TTAAAGAATTTTTAA TERM 702 470938 - 470961 + r 76 -4.6 -5.38054 | gap 1, opp_overlap 470938 TTAAGAAGAATATGA GGTGTTCCAAA ACT TATGGA-CACC TTTTTATTTATCAAG TERM 703 471321 - 471354 + r 76 -2.5 -5.84381 | opp_overlap 471326 CTTTTTAGAGATAAA AAAAATCAACCCC TGTTATAT GTGGTTGATTTTG TTTTTTTCTTCGTCG TERM 704 471349 - 471326 - R 79 -2.4 -6.06529 | opp_overlap 471321 TAGAGATAAAAAAAA TCAACCCC TGTTATAT GTGGTTGA TTTTGTTTTTTTCTT PAa_0475 471659 - 471336 - | hypothetical protein TERM 705 471735 - 471720 - H 75 -4 -5.56673 | opp_overlap 471733, overlap 471721 ATTTACAACAAAAAA CCACAT AATA ATGTGA TTCAATATTATTGAA PAa_0476 471804 - 472145 + | hypothetical protein TERM 706 472596 - 472538 - T 93 -9.3 -4.54306 | opp_overlap 472538 GTTAATAAAAAAATA GTTTTTAAAATGGTGCAAAAATTCAAA CAAAC TTTAAACTTAACCACCATTTTAAAAAC TATTAAAATTAATCG TERM 707 473217 - 473235 + T 74 -6.2 -4.6902 | opp_overlap 473211 473217 473216, overlap 473205 TTATGAAAATAAAAT TTTTAATT TTA AATTAAAA TTTTTGCAATTATAA TERM 708 473405 - 473390 - T 100 -9 -6.38492 | opp_overlap 473390 AGTAATAAAAAAAAA GACCCT TAAA AGGGTC TTTGGTTTGTGATTA TERM 709 473390 - 473405 + T 82 -9 -4.17789 | opp_overlap 473390 AGTAATAAAAAAAAA GACCCT TAAA AGGGTC TTTGGTTTGTGATTA PAa_0478 473939 - 473427 - | hypothetical protein TERM 710 473640 - 473652 + g 74 -4.9 -5.04356 | opp_overlap 473640 TTTTATATCATAAAG TCTTT GAT AAAGA TTTTTAATTATTTGA TERM 711 473958 - 473971 + H 89 -4.5 -6.04419 | TATATAGTTTTTTCA CCAGT CAGA GCTGG TTTTTTTATTATTTT PAa_0480 475428 - 475649 + | hypothetical protein TERM 712 475774 - 475751 - f 82 -5.3 -5.47159 | opp_overlap 475770 TTTTAATACAAAAAA CCACACAGA ATGGCA TGTGTGTGG GCATTTCACAATTTT TERM 713 475962 - 475972 + F 70 -4 -5.25805 | opp_overlap 475962 475956 ACAAAATATTAAAAA TTGT TAA ACAA TTTTTTCACTTTATT TERM 714 476885 - 476867 - g 73 -3.2 -5.38398 | opp_overlap 476871, overlap 476871 AGAAAAAGATAAAAA GAAATTAG AGG CTAATTTT GGTATTTACAATAAG TERM 715 476881 - 476871 - g 71 -4 -5.0707 | opp_overlap 476871, overlap 476867 AAAGATAAAAAGAAA TTAG AGG CTAA TTTTGGTATTTACAA znuA 476283 - 477404 + | ABC-type Zn/Mn transport system periplasmic component/surface adhesion TERM 716 478004 - 478030 + G 75 -5.3 -4.94672 | gap 1 TTCCTCAACGCAATT CAGTTGATTGGG ATTT TCCAAT-AACTG TTTTTGATGTTGTTT znuC 477742 - 478506 + | ABC-type Zn/Mn transport system, ATPase component TERM 717 478553 - 478598 + G 76 -7.1 -4.26344 | gap 1, opp_overlap 478553 478565, overlap 478563 478565 TTATAGAAATATTAA CCAAATATAAC-ACCCTTAAGA TCT TTTTAGGGGTTGTTTTATTGGG TTTTGCTGCAGGTAT TERM 718 478565 - 478585 + G 76 -6.9 -4.45817 | opp_overlap 478565 478553, overlap 478563 478553 TAACCAAATATAACA CCCTTAAGA TCT TTTTAGGGG TTGTTTTATTGGGTT znuB 478522 - 479427 + | ABC-type Zn/Mn transport system,permease component TERM 719 479750 - 479761 + G 72 -5.8 -4.5774 | TCTTTAGTTTTTTCT TCGC TTTA GCGA TTTTAATTATTAGTG znuB 479443 - 480531 + | ABC-type Zn/Mn transport system,permease component hisS 481187 - 482434 + | Histidyl-tRNA synthetase TERM 720 483438 - 483454 + G 70 -3.1 -5.27938 | overlap 483447 GTAGAAAAATACCAA TTGTTTT TTG AAAATAA TTTTTCTTTAAAACT aspS 482445 - 484130 + | Aspartyl-tRNA synthetase TERM 721 484720 - 484689 - g 82 -8.2 -4.50627 | TATTTATCAAAGAAA TCAAATTAGAAATC ATGT GATTCCTTATTTGA AAGAAAAAACTAATT mesJ 484147 - 485454 + | Cell cycle protein hflB 485475 - 487418 + | ATP-dependent Zn protease rluA 487510 - 488418 + | Pseudouridine synthase metN 488470 - 489162 + | D-methionine transport system ATP-binding protein metQ 489199 - 490224 + | Putative D-methionine transport system substrate-binding protein metl 490226 - 490939 + | D-methionine transport system permease protein PAa_0493 491014 - 491337 + | hypothetical protein rpsO 491362 - 491580 + | 30S ribosomal protein S15 TERM 722 491596 - 491619 + F 85 -3.2 -6.28401 | opp_overlap 491587 AATTACTATTCAAAA TATCGCAAAG CTAT TTTTGTGGTA TTTTTTTATTTTTTA thiJ 491679 - 492221 + | Putative intracellular protease/amidase rplM 492412 - 492867 + | 50S ribosomal protein L13 TERM 723 493242 - 493232 - g 91 -6.8 -5.41143 | TATGGTTTAAAAAAA GCTC GCC GAGC TCCGCAATTCTCTAA rpsI 492872 - 493264 + | 30S ribosomal protein S9 TERM 724 493271 - 493289 + F 85 -6.1 -5.626 | opp_overlap 493271, overlap 493261 AAACGTTAATAAAAA GAACTTT TTAAT AAAGTTC TTTTTTTATCAAATA TERM 725 493289 - 493271 - f 80 -6.1 -5.11112 | opp_overlap 493261 493271 AAACGTTAATAAAAA GAACTTT TTAAT AAAGTTC TTTTTTTATCAAATA gltX 493337 - 494683 + | Glutamyl-tRNA synthetase TERM 726 495836 - 495806 - g 70 -4.9 -4.72272 | opp_overlap 495800 TTTTTTGATTAAAAA TGATTTTTATTTG CAAAT CAAAAAAAAACCA ATAGTGGATTTGGAA cysS 494835 - 496154 + | Cysteinyl-tRNA synthetase nfnB 496167 - 496784 + | Putative nitroreductase TERM 727 496829 - 496774 - T 100 -12.3 -3.93401 | opp_overlap 496793, overlap 496793 TTGATAAAGTAACAA CTTATTTATAATAAAAAAACCAAGC AAAAAA GCTTGGTTTTTTTATTATTCAAAAG ATAAATATTTTTTTC TERM 728 496793 - 496810 + T 95 -7 -5.95946 | opp_overlap 496774 496793 TTTATAATAAAAAAA CCAAGC AAAAAA GCTTGG TTTTTTTATTATTCA TERM 729 496810 - 496793 - T 95 -7 -5.88565 | opp_overlap 496793, overlap 496774 TTTATAATAAAAAAA CCAAGC AAAAAA GCTTGG TTTTTTTATTATTCA PAa_0501 497163 - 496819 - | hypothetical protein TERM 730 496987 - 497001 + g 84 -5.8 -5.27335 | GGCATCTTTTGTTAA GAAAAA AGG TTTTTC TTTTTCTTTGAAAAA PAa_0502 497374 - 497168 - | hypothetical protein PAa_0503 497959 - 497390 - | N6-adenine-specific methylase PAa_0504 498534 - 497956 - | hypothetical protein PAa_0505 499090 - 498536 - | Putative hydrolase of the HAD superfamily TERM 731 498597 - 498607 + g 82 -2.6 -6.06529 | TTTTCTTTTTTTATC TTTT TTA AAAA TTTTTTTTCTCTGTA greA 499550 - 499080 - | Transcription elongation factor smtA 500165 - 499566 - | SAM-dependent methyltransferase ruvX 500574 - 500152 - | Putative holliday junction resolvase alaS 503210 - 500619 - | Alanyl-tRNA synthetase TERM 732 500995 - 501008 + g 71 -3.9 -5.05301 | AAGTCTTTTTTTTCA CAAAT AAAT ATTTG TTTTTGTAATTCTTT TERM 733 501089 - 501106 + g 70 -5.7 -4.2928 | GAACAGGAAGAGCTT CAAAAAA GAGC TTTTTTG TTTGTGCTTTTTGTA TERM 734 503488 - 503470 - R 100 -10.4 -5.46706 | opp_overlap 503469 503470 503472 ATTTTAAAATAAAAA GACCATTT TAT AAATGGTC CTTTAAAATAAACTA TERM 735 503470 - 503488 + r 82 -10.4 -2.76162 | opp_overlap 503470, overlap 503469 503472 ATTTTAAAATAAAAA GACCATTT TAT AAATGGTC CTTTAAAATAAACTA gapA 504508 - 503501 - | Glyceraldehyde-3-phosphate dehydrogenase TERM 736 504302 - 504314 + g 72 -3.5 -5.26875 | AGGAATTTGTTCACC TTTAA CTA TTAAA TTTTTTCCTTCAAAA pgk 505771 - 504566 - | Phosphoglycerate kinase TERM 737 505540 - 505530 - G 74 -4 -5.27335 | opp_overlap 505509 TGTTTTAAATAAAAA GATA ATT TATC AGCTACAGATTTTAA fba 506672 - 505806 - | Fructose-bisphosphate aldolase class II cof 507551 - 506757 - | Putative hydrolases of the HAD superfamily subfamily IIB tpiA 508463 - 507657 - | Triosephosphate isomerase TERM 738 507746 - 507730 - G 93 -8.1 -5.2696 | opp_overlap 507736 GTAAAATTTAAAAAA TCTTTAG TTT CTAAAGA AGCTTTGCCAACTAA TERM 739 508244 - 508260 + g 72 -6.6 -4.08064 | CAGTAAAAGCTCCCT CGCTTT CATGA AAAGCG TTTTGAGCACCAATT TERM 740 508516 - 508500 - R 87 -6.7 -5.40072 | opp_overlap 508482 TTCTTTCTAAAAAAA TTCTTTT TAA AAAAGAA AAATTATATTTGTGT cdsA 509617 - 508715 - | Phosphatidate cytidylyltransferase TERM 741 509299 - 509284 - G 72 -4.8 -4.9448 | opp_overlap 509284, overlap 509279 AGGGAGCAAACAAAA GAAAAA AACT TTTTTC TTTAGGCAATAAAAA TERM 742 509327 - 509315 - G 74 -4.9 -5.10461 | TTTAGGCAATAAAAA TTCTT CCA AAGAA CCTAAAAAAACAAAA TERM 743 509532 - 509516 - G 80 -3.8 -5.66684 | opp_overlap 509516 TAACCCACAAAAAAA CAAAAA GGCAA TTTTTG GTTCTTCATCAAGCA frr 510207 - 509653 - | Ribosome recycling factor pyrH 510926 - 510210 - | Uridylate kinase tsf 511806 - 510973 - | Elongation factor Ts (EF-Ts) TERM 744 511178 - 511192 + g 70 -2.2 -5.49729 | overlap 511180 AGCTGTTTTTCGGTT TGTTTT TGT AAAATA TTTTTTTCAGTAGTT TERM 745 511377 - 511403 + g 73 -4.6 -5.00616 | CTTCTTCTTTTTTAG TAACTTTTAATA TTC TTTTAAGAGTTA TTTTTTCACCCAAAA TERM 746 511578 - 511568 - G 73 -5.4 -4.71426 | opp_overlap 511568 TTTTTAGCAACAAAA TCAG TTT CTGA ATTTAATTCGTATAA rpsB 512697 - 511915 - | 30S ribosomal protein S2 TERM 747 512955 - 512968 + r 72 -3.9 -5.43514 | overlap 512942 512953 TTTAGCAAATAATTT GTTAT ATTA ATAAC TTTTTTAGTTGTTTT dut 513434 - 512973 - | DeoxyUTP pyrophosphatase TERM 748 513399 - 513418 + g 90 -3.6 -6.06723 | opp_overlap 513399 TTCGGTTTGATAAAG GGTTATTT TTTC AAAAAACC TTTTTTTTTGAGACA ung 514296 - 513652 - | Uracil-DNA glycosylase PAa_0522 515008 - 514316 - | hypothetical protein TERM 749 514867 - 514854 - G 80 -5.3 -5.25735 | TTAAAAAATGAAAAA CCTAA ATAT TTAGG ACATTTTTCTTTTAA TERM 750 520304 - 520320 + G 75 -3.7 -5.45802 | ACTCTTAACTTCCTT CCTGATG AAT TATTAGG TTTTTATTTTGAAGA PAa_0523 515444 - 521524 + | Putative peptidase M41 cell division protein, fragment TERM 751 521929 - 521944 + F 95 -6.2 -6.15717 | opp_overlap 521929 TTAAATATTTATAGA CTAACT TTTT AGTTAG TTTTTTTTATATTTA PAa_0524 522352 - 522543 + | hypothetical protein TERM 752 522744 - 522759 + T 72 -4 -5.38326 | AGCCTTTTTGTATCC GTCTTA AATG TGAGAC TTTTTATTTAATTAA TERM 753 522961 - 522929 - T 70 -4.1 -5.16151 | opp_overlap 522931, overlap 522930 522931 TAAATTTAATAAAAA TTGGCTCTAAATCAT TTA ACGATTAAGAGCCTT TTAGTGTTGATAATT TERM 754 522960 - 522930 - T 73 -7.6 -3.68064 | opp_overlap 522931, overlap 522929 522931 AAATTTAATAAAAAT TGGCTCTAAATCAT TTA ACGATTAAGAGCCT TTTAGTGTTGATAAT TERM 755 522959 - 522931 - T 85 -11.1 -2.79212 | opp_overlap 522931, overlap 522930 522929 AATTTAATAAAAATT GGCTCTAAATCAT TTA ACGATTAAGAGCC TTTTAGTGTTGATAA TERM 756 522931 - 522959 + T 86 -8.9 -4.44797 | opp_overlap 522930 522929 522931 AATTTAATAAAAATT GGCTCTAAATCAT TTA ACGATTAAGAGCC TTTTAGTGTTGATAA PAa_0526 523213 - 522962 - | hypothetical protein TERM 757 523561 - 523537 - R 70 -5.2 -4.83169 | opp_overlap 523521, overlap 523539 523545 523547 ATTTTGGGATAAAAA TCTATATACA TTTTT TGTATATAAA ATACAAAAAACGAAA TERM 758 523573 - 523545 - R 71 -8.4 -3.03575 | overlap 523539 523537 523547 ATAAAAATCTATATA CATTTTTTGTAT ATAAA ATACAAAAAACG AAACTTGAAATTAAA PAa_0527 524106 - 523666 - | hypothetical protein PAa_0528 524452 - 524123 - | hypothetical protein TERM 759 524624 - 524609 - R 70 -3.4 -5.40072 | opp_overlap 524589 524609 TTTCTTTCAAAAAAA TAATTT ATAA AAATTA TGTGATTTCAGTTTA PAa_0529 525026 - 524811 - | hypothetical protein TERM 760 524907 - 524943 + g 71 -3.9 -5.17353 | opp_overlap 524915, overlap 524912 AGATATTACATCATT TAGGACAATTTTAAAAA AAT TTTTTAAGACTGACTTA TTTTTTAGTCGATCT TERM 761 525454 - 525422 - R 73 -6.5 -4.23487 | opp_overlap 525429 525445 525447, overlap 525429 ATAAATATAAAAAGA GAAAAAAGACTCA ATTACTA TGAGTCTTTTTTG AAAAAAAGTCTTTAT TERM 762 525447 - 525429 - R 82 -4.6 -5.69068 | opp_overlap 525429 525445, overlap 525422 TAAAAAGAGAAAAAA GACTCA ATTACTA TGAGTC TTTTTTGAAAAAAAG TERM 763 525429 - 525447 + r 70 -4.6 -5.00616 | opp_overlap 525429 525422, overlap 525445 TAAAAAGAGAAAAAA GACTCA ATTACTA TGAGTC TTTTTTGAAAAAAAG phnL 526980 - 525466 - | ABC transporter, ATPase component pheT 529656 - 527227 - | Phenylalanyl-tRNA synthetase beta-chain TERM 764 527981 - 527964 - G 75 -7.1 -4.17048 | opp_overlap 527963 527977 TTTGTCTTAAAATAA CTTTATC TTGC GATAAAG GGTTTAATATTTGGA TERM 765 529139 - 529155 + g 79 -9.5 -3.28712 | AAAAGATCGGCACGA TTAGGAG TGA CTCCTAA TTCTAAAAAAAAACC pheS 530674 - 529643 - | Phenylalanyl-tRNA synthetase alpha-chain TERM 766 530566 - 530578 + g 72 -3.5 -5.20333 | CTTGCAAAAAGCTTT TTTTT CCT AAAAA TTTTTGTTCTAAATA PAa_0533 531061 - 530690 - | hypothetical protein TERM 767 530764 - 530746 - G 71 -3.8 -5.0666 | CAGTTAAAAAAGAAA GCCACATT GCC AAAGTAGC TCCTAAAAAGACTCC cof 531851 - 531078 - | Putative hydrolase of HAD-superfamily subfamily IIB TERM 768 531550 - 531560 + g 75 -5.4 -4.97312 | AAAATTTGGTTTCCA GCTT CTA AAGC TTTTTGATTAATTTT dnaE 534928 - 532172 - | DNA polymerase III alpha subunit TERM 769 533257 - 533271 + g 70 -5.8 -4.41114 | CTTTTTGACTTTCTT TAATTG CTG CAATTA TTTGTTCTATGATAG TERM 770 534519 - 534537 + g 73 -4.6 -5.00616 | TCTTGAAATTCATTT TTTTGGTC GTT GACAAAAA TTTTTTCCCAAAAAG TERM 771 534562 - 534552 - G 76 -6.8 -4.56775 | ATTTTTTCCCAAAAA GGAC AAA GTCC GCAAATGATAATAAA TERM 772 534741 - 534751 + g 70 -5.4 -4.62051 | opp_overlap 534733, overlap 534736 AAATTAATTTTAAGG CCTA AAA TAGG TTTTATATCGTGTTT lysU 536443 - 534950 - | Lysyl-tRNA synthetase (class II) TERM 773 536878 - 536893 + H 70 -3.4 -5.43866 | opp_overlap 536876 536875 AAATTTGAAAAATTA TTTTTA GTCT TAAAAA TTTTTTTAAAACTTA TERM 774 538040 - 538026 - g 95 -7.2 -5.54264 | AAACATTTAAAAAAA GTTTTG TTA CAAAAC GACATTAATCTTTAT lplA 537120 - 538130 + | Lipoate-protein ligase A PAa_0538 538160 - 538828 + | hypothetical protein TERM 775 539395 - 539407 + G 71 -2.7 -5.4505 | opp_overlap 539406, overlap 539396 GGAGTTTATATTTAG TGTTT TTC AAACG TTTTTTATTAAAAAA TERM 776 539724 - 539734 + G 71 -4 -5.00884 | opp_overlap 539724 TTAAAAAACATTAAC TCTT ATA AAGA TTTTTTGCCAAAAGT TERM 777 540643 - 540627 - g 70 -2.3 -5.49809 | GAAACTTTAAAAAAA GCAAT TAATCGT ATTGC ATTAGGAATAACTGA hflB 539394 - 540674 + | ATP-dependent Zn protease argS 540757 - 542430 + | Arginyl-tRNA synthetase TERM 778 543024 - 543002 - f 86 -2.6 -6.37666 | overlap 543004 543006 ATAAAATAAAAAAAA GCCACATGCA ATA TGCAAGTCAC GTGGTTTTTTTATTT TERM 779 543297 - 543281 - g 74 -6.7 -4.2803 | TAGGTCAATTCAAAA TTTTTCT CAA AGAAAAA GAAAAAGAATATCTG TERM 780 543655 - 543614 - g 82 -2.4 -5.95539 | opp_overlap 543622 543628 CTTTAAATAAAAAAA CAAAACTTTTAAAAGAGT TTTTTT ACTCTTTTTATCGCTTTG AAAATGATTTTATCT TERM 781 545659 - 545684 + G 73 -7.8 -3.71913 | overlap 545657 ACTAAAGAACTTTTT TCTTTAAAAG ATGATG CTTTTAAAGA TATTTTAAATATACC TERM 782 545900 - 545890 - g 71 -4 -5.02074 | opp_overlap 545890 TTATTGGTTAAAAAA TCTT TAG AAGA TGGTTATTTGGTAGG TERM 783 546072 - 546054 - g 70 -5.4 -4.45545 | AGAAAAAGAAAAATA TTATTCTT TAG AAGAACAA AGTTATTATGATGCT TERM 784 546176 - 546186 + G 73 -5.4 -4.70879 | ACGGTCATGATATTC CGTT TGA AACG TTTTTAGGGTTTGAA polC 543097 - 547689 + | DNA polymerase III alpha subunit TERM 785 547842 - 547852 + G 82 -5.4 -5.40072 | TTATATTGGCGTTTT GCAA CCT TTGC TTTTTTTGCAAAAAA TERM 786 548356 - 548333 - g 100 -9.8 -5.1356 | opp_overlap 548338 CTTTAGGAACAAAAA TTAAAGGTTT ACAA AAACCTTTAA AAAAAATGAGCAAAA trpS 547768 - 548772 + | Tryptophanyl-tRNA synthetase TERM 787 548857 - 548878 + F 100 -9.5 -5.60993 | opp_overlap 548859 TTTAAAATTCTTTAA GACTGACTT ATTT AAGTCGGTC TTTTTTTGTACCCAA TERM 788 549217 - 549237 + F 86 -5.5 -5.76949 | opp_overlap 549217 549223, overlap 549212 549228 GAACTGTTTTCAAAA CTTAAACAA CTT TTGTTTTAG TTTTTTTTAAAACTC TERM 789 549442 - 549459 + F 71 -5.7 -4.57341 | AATCCATACCCATGA TGTTTTT TTGG AAAAACA TTTTTAGAAAAAATT TERM 790 549535 - 549514 - f 79 -3.7 -5.77856 | opp_overlap 549521, overlap 549482 AAGAAACCAAAAAAA GACCGACCT GAAT AAATCAGTC TTTGCAAAATTTTTA TERM 791 549964 - 549946 - f 87 -6.8 -5.4477 | overlap 549915 AAATGTCTAAAAAAA TATTTCCC CAA GGAAAATA TAGATATAAATAATG PAa_0543 550678 - 551286 + | hypothetical protein TERM 792 551510 - 551527 + T 83 -4.1 -5.85737 | AATTTTTCATAAACG GCCCT CTTTATTA AGGGC TTTTTTTATTGATCT TERM 793 551961 - 551985 + T 76 -2.3 -5.82316 | overlap 551957 AATTATATAAATTAT TTTAAAAATGA TTG TTATTTTTTAA TTTTTTTTACATCAT TERM 794 552142 - 552167 + T 95 -12.1 -3.71751 | opp_overlap 552119 552142, overlap 552147 TAAAAAATAAAAAAA TAAAACTACCT TTCG AGGTAGTTTTA TTCTATCTATTATCT TERM 795 552167 - 552142 - T 100 -12.1 -6.28401 | opp_overlap 552142 552147, overlap 552119 TAAAAAATAAAAAAA TAAAACTACCT TTCG AGGTAGTTTTA TTCTATCTATTATCT TERM 796 552147 - 552162 + T 86 -7.6 -4.88495 | opp_overlap 552142, overlap 552142 AATAAAAAAATAAAA CTACCT TTCG AGGTAG TTTTATTCTATCTAT iscU 552620 - 552177 - | NifU homolog csdB 553852 - 552632 - | Selenocysteine lyase tyrS 555112 - 553865 - | Tyrosyl-tRNA synthetase TERM 797 555157 - 555179 + r 71 -5.8 -4.66347 | opp_overlap 555157 555155 555170, overlap 555126 555165 AATTTTTCTAAAATA TTATTTTTTT AAA GAAAAAATAA TTTATCTTTTTTCCT rplS 555537 - 555181 - | 50S ribosomal protein L19 trmD 556304 - 555570 - | tRNA (Guanine-N(1)-)-methyltransferase TERM 798 556139 - 556108 - G 82 -4.4 -5.69379 | gap 1 AGACAATCAAAAAAA GGAGG-GAAAGAAAG TAA CATTCCTACACCTCC TCCGTAAACACAATC rpsP 556615 - 556340 - | 30S ribosomal protein S16 TERM 799 556377 - 556391 + g 81 -2.9 -5.77853 | overlap 556371 556377 556379 TTAATTTGATTGTCT TTTTG AAAAA CAAAA TTTTTTTTCAAGATT TERM 800 556377 - 556404 + g 75 -3.6 -5.54264 | overlap 556371 556377 556379 TTAATTTGATTGTCT TTTTGAAAAACA AAAT TTTTTTTCAAGA TTTTTTTAACTGTTT TERM 801 556639 - 556653 + r 70 -2.9 -5.59962 | overlap 556629 AACTCTACTTTCTTA GTAAT TTATT ATTAC TTTTTATTTATTTTA prfB 557803 - 556691 - | Protein chain release factor B TERM 802 556942 - 556954 + g 77 -6.3 -4.66264 | ATAATTTGATTTTTA GCATT TGT AATGC TTTTTCGCGGTTTTG TERM 803 557597 - 557607 + g 74 -2.6 -5.56673 | GGTTTCTAAATGTTT TAAA GTA TTTA TTTTTTCTTGTAAAT TERM 804 557652 - 557672 + g 70 -5.5 -4.56715 | CTTGTTGCAACTGCT TTTTTAGGA TCA TCCCAAAAA TCTTTTTTTTGCATT secA 560305 - 557807 - | Preprotein translocase subunit SecA TERM 805 557931 - 557919 - G 70 -6.3 -4.08216 | GGAGGGGTTTGAAAA CTTTG CGG CAAAG GAAATCTTAAAATAG TERM 806 559426 - 559416 - G 82 -5.4 -5.44119 | opp_overlap 559416 TGCATTGTAAAAAAA GCTT TTA AAGC GTTTTTGATATGGTG TERM 807 560250 - 560263 + g 77 -5.3 -5.01732 | TTAGCGATAACTCTT GCTTT TCTT AAAGC TTTTTTAGAAGAATT TERM 808 560497 - 560477 - R 82 -9.9 -2.97825 | opp_overlap 560474 ATCAATAACATTATA CCTTTTTTT AAG AAAAAAAGG AAACTTATTTTAAAA PAa_0552 562123 - 560507 - | hypothetical protein TERM 809 562150 - 562164 + H 95 -5.8 -6.04419 | opp_overlap 562150 CTAATTACTTTATAA TTCATA TAA TATGAA TTTTTTTGTTCTTTT TERM 810 562363 - 562382 + H 100 -8.6 -5.9873 | opp_overlap 562363 562366 TTAAAAATTCTATAA GATCGACT TTTT AGTCGGTC TTTTTTTTGTGATCA TERM 811 562416 - 562448 + H 100 -13.8 -2.78384 | TCATGGATATTTTCA TTCCTTTCTAAAAA AAATG TTTTTAGAAAGGAA TATAATGGAAAAAAC TERM 812 562551 - 562531 - g 74 -4.7 -5.01732 | AATTCGGCGAAAAAA CACGAATTT AAA AAATACGCG AAGAACGCCTTAAAT PAa_0553 562432 - 562620 + | hypothetical protein TERM 813 563093 - 563074 - T 71 -6.6 -4.15029 | AGTTGATAGAAATAA TTTTTTCA AAAA TGAAAAAA AATCTACTATTTATA TERM 814 563796 - 563815 + T 82 -5.8 -5.62219 | overlap 563779 TTAAAAAACTTTTAA GATTAACT TTTT AGTTAGTC TTTTTTTAATATCTT TERM 815 564039 - 564014 - T 100 -6.9 -6.28967 | opp_overlap 564014 GATAAATAAAAAAAA TCCCAGCTGTT AGAA AACAATTGGGA TTAATCAAAATCTGG dnaJ 565106 - 564063 - | Chaperone protein DnaJ dnaK 567031 - 565175 - | Molecular chaperone DnaK grpE 567686 - 567018 - | Molecular chaperone GrpE (heat shock protein) TERM 816 567442 - 567455 + g 87 -2.4 -6.22691 | opp_overlap 567442 TGATTTTTCAAAGAA GCAT CAGCAA ATGC TTTTTTTTGTTCTTC hrcA 568738 - 567716 - | Heat-inducible transcription repressor HrcA PAa_0558 569918 - 569571 - | hypothetical protein TERM 817 569662 - 569640 - G 74 -8 -3.56836 | AAATGAGTTTCTAAA TAAAAAAAAT AGT ATTTTTTTTA AACCACTTATCAAAC TERM 818 569836 - 569813 - G 93 -4.6 -5.9873 | opp_overlap 569813 TGAGTACAAAAAAAA GACCGACT ACAAAATA AGTCAGTC CTATTTTTTTAACAA TERM 819 569875 - 569891 + g 78 -2.4 -5.80364 | AGCATCCTAAGTATT TTAAAA TATTT TTTTAA TTTTTTTATTAAAAT rplQ 570326 - 569970 - | 50S ribosomal protein L17 rpoA 571336 - 570344 - | DNA-directed RNA polymerase alpha subunit rpsK 571751 - 571365 - | 30S ribosomal protein S11 rpsM 572132 - 571767 - | 30S ribosomal protein S13 rpmJ 572261 - 572145 - | 50S ribosomal protein L36 infA 572491 - 572273 - | Translation initiation factor IF-1 map 573269 - 572526 - | Methionine aminopeptidase (MAP) adk 573919 - 573266 - | Adenylate kinase TERM 820 573334 - 573349 + g 82 -6.2 -5.0133 | opp_overlap 573337 TGTTTTGCATCCCAT CAACTT CAAA AAGTTG TTTTTTGGAGCGGTA secY 575188 - 573941 - | SecY protein TERM 821 574956 - 574946 - G 74 -2.6 -5.56112 | overlap 574947 ACAAAAAGGAAAAAA TTTT TGT AAAA ATTGAACTACAATCG rplO 575627 - 575190 - | 50S ribosomal protein L15 TERM 822 575569 - 575587 + g 75 -7.4 -4.09739 | CCACTACCAGGACCA CGACCTAA ACG TTTGGTCG TTTTACGAGCATTGG rpmD 575824 - 575627 - | Ribosomal protein L30/L7E rpsE 576336 - 575821 - | 30S ribosomal protein S5 rplR 576713 - 576360 - | 50S ribosomal protein L18 rplF 577274 - 576723 - | 50S ribosomal protein L6 rpsH 577697 - 577305 - | 30S ribosomal protein S8 rpsN 577983 - 577714 - | 30S ribosomal protein S14 TERM 823 577824 - 577834 + g 71 -4 -5.00616 | overlap 577813 GAGGTCTACCATCGA TAGA ATC TCTA TTTTTTAAACGCACA rplE 578546 - 577998 - | 50S ribosomal protein L5 TERM 824 578273 - 578245 - G 73 -3.1 -5.38951 | opp_overlap 578249 AATTTATATAAAAAA GCTTCTTTACGAG CTC CCCTTAAAGTAAC TTTGGCGCCAATCGG rplX 578908 - 578561 - | 50S ribosomal protein L24 rplN 579282 - 578920 - | 50S ribosomal protein L14 rpsQ 579566 - 579279 - | 30S ribosomal protein S17 rpmC 579890 - 579600 - | 50S ribosomal protein L29 rplP 580309 - 579887 - | 50S ribosomal protein L16/L10E rpsC 581039 - 580287 - | 30S ribosomal protein S3 TERM 825 580597 - 580607 + g 73 -5.4 -4.66163 | ATTCCTTTAGCGCCT GCTT TAA AAGC TTTTTGGATGGCCAT TERM 826 581003 - 581026 + g 89 -7.6 -5.01732 | opp_overlap 581001, overlap 581001 AAGTTCGAATAATTC CTAATCTTAA GCCA TTAGGATTAG TTTTTTGACCCACTT rplV 581391 - 581023 - | 50S ribosomal protein L22 rpsS 581693 - 581412 - | 30S ribosomal protein S19 rplB 582537 - 581707 - | 50S ribosomal protein L2 TERM 827 581735 - 581745 + g 71 -4 -5.0538 | opp_overlap 581735, overlap 581720 CGTCTAATAATTAAT TCAT TAG ATGA TTTTTTGCGATCACG rplW 582845 - 582561 - | 50S ribosomal protein L23 rplD 583471 - 582848 - | 50S ribosomal protein L4 rplC 584123 - 583458 - | 50S ribosomal protein L3 TERM 828 583852 - 583862 + g 71 -4 -5.03715 | opp_overlap 583852 AAAGCAGACAATGAA GAAA TGT TTTC TTTTTTAAAAATAAT rpsJ 584486 - 584169 - | 30S ribosomal protein S10 rpmF 584851 - 584654 - | 50S ribosomal protein L32 TERM 829 584773 - 584748 - G 75 -7.7 -3.91402 | TGAGATAAAGTGAAA TTGTTTGTTTG TTTG CAAACAACCAA AGCAGGATTATCTAA PAa_0590 586038 - 585373 - | hypothetical protein TERM 830 585433 - 585443 + g 77 -5.4 -5.03747 | ATTTTCTGTAATTTT TTCC GAA GGAA TTTTTTCCAACATTT TERM 831 585520 - 585536 + g 73 -3.1 -5.50723 | overlap 585522 AATTATTATAATTGC TGTTATT TTT AATAATA TTTTTCTTTTCATAA obg 587681 - 586416 - | Putative GTPase TERM 832 586876 - 586895 + g 76 -7.2 -4.41348 | overlap 586864 586863 586865 TTTTCAACTAAAGTT GAGTTGTA TTGT TGCAACTC TTTATTTAAAGCAAC rpmA 587986 - 587705 - | 50S ribosomal protein L27 TERM 833 587933 - 587944 + g 80 -5.8 -5.00616 | ACGACCATTTCTAGT GGAG CCTG CTCC TTTTTTAGAAGCAAA PAa_0593 588317 - 587991 - | Putative ribosome-associated protein TERM 834 588138 - 588121 - G 90 -5.7 -5.72207 | TCTAAATGAAAAAAA TTATCTT CTAA AAGATAA GAAAAAGAAATGTCT rplU 588635 - 588327 - | 50S ribosomal protein L21 PAa_0595 589685 - 588765 - | Rhodanese family protein TERM 835 589870 - 589860 - R 75 -4 -5.5943 | opp_overlap 589860 AAAGGATTAAAAAAA GATA AAA TATC TTCTAAAATGTTAAA TERM 836 590079 - 590060 - R 93 -5.1 -6.20267 | TGAAAAATAAAAAAA TCAAATC TATGTG GATTTGA CTTAACGCTTAATAA serS 591337 - 590081 - | Seryl-tRNA synthetase PAa_0597 591701 - 591453 - | hypothetical protein PAa_0598 591930 - 591721 - | hypothetical protein rpsT 592230 - 591964 - | 30S ribosomal protein S20 TERM 837 592375 - 592411 + r 86 -5.4 -5.75822 | opp_overlap 592384 TTTATTTTTGGTTAT TTAAATCAAGATAAAA TAATT TTTTATCTGGCTTTAA TTTTTTTGATTTGTG PAa_0600 593408 - 592566 - | hypothetical protein TERM 838 592834 - 592844 + g 70 -5.4 -4.58283 | ATTTTTTTTCTTTCA GCAA TAT TTGC TTTTTGGAGGGCTTC TERM 839 593480 - 593499 + H 73 -7.9 -3.68529 | opp_overlap 593480 TTTTAGTCAAAAAAA GCCCTTA TAAGTT TAAGGGC TTTAAGTCATGCGCT TERM 840 593499 - 593480 - H 100 -7.9 -5.47218 | opp_overlap 593480 TTTTAGTCAAAAAAA GCCCTTA TAAGTT TAAGGGC TTTAAGTCATGCGCT TERM 841 593617 - 593607 - H 70 -2.6 -5.55664 | TTATCACCAAAAAAA TAAT CCA ATTA ACAAACCATATTAAA TERM 842 594629 - 594616 - g 71 -2.5 -5.46698 | TTTAAAAGGAAAAAA TAAAA AATA TTTTA TTCAAAAATTAAAAG TERM 843 595101 - 595060 - g 70 -8.1 -3.09004 | opp_overlap 595066 595072, overlap 595066 TTATTGTCAAAACGA CCAAAAGAAAGCTTTGGGA GGGT TCCCCAATTTTTCTTCTGG AAAAGGGCTTGTTTT TERM 844 595072 - 595089 + G 71 -4.1 -5.18726 | opp_overlap 595066 595060, overlap 595066 CGACCAAAAGAAAGC TTTGGGA GGGT TCCCCAA TTTTTCTTCTGGAAA thiI 594560 - 595873 + | Thiamine biosynthesis protein ppa 596233 - 596763 + | Inorganic pyrophosphatase TERM 845 596841 - 596858 + G 71 -2.7 -5.5353 | opp_overlap 596844, overlap 596844 CTCATTCGTGTTGAA GAACCAA TTTT TTGGTTG TTTTTTCTTAATCTC TERM 846 596844 - 596855 + G 71 -4.4 -4.82661 | opp_overlap 596844, overlap 596841 ATTCGTGTTGAAGAA CCAA TTTT TTGG TTGTTTTTTCTTAAT smpB 596833 - 597363 + | SsrA-binding protein TERM 847 597687 - 597699 + F 84 -4.8 -5.77856 | opp_overlap 597685 597687 TATTTGCAACAAATA TGCC TGTTT GGCA TTTTTTTAATTTATT TERM 848 598422 - 598412 - g 78 -2.6 -5.85011 | opp_overlap 598412 598417, overlap 598403 TAAAAATCAAAAAAA TATT TTT AATA ATTAATTCAATAATT PAa_0604 598390 - 598968 + | hypothetical protein TERM 849 599449 - 599459 + G 71 -4 -5.12617 | opp_overlap 599449 ACTGAAGCAAACCAA CAAT TTT ATTG TTTTTTAGATGGTTA TERM 850 600057 - 600047 - g 74 -4 -5.31275 | TTTCAGGACAAAAAA CAAA AGA TTTG GTAGAAAAAAAATAT TERM 851 600538 - 600550 + G 70 -6.3 -4.09685 | opp_overlap 600535 ATTTCAAGAATATTT GATCT CAA AGATC TTTTAAAAGGTAGCA PAa_0605 599101 - 600900 + | hypothetical protein TERM 852 601204 - 601194 - g 84 -4 -5.75342 | TGGTTGTAAAAAAAA TAAC CGA GTTA AAAGTTGTCGTGTTC nusA 601078 - 602151 + | Transcription elongation factor TERM 853 602350 - 602336 - g 70 -2.9 -5.20328 | opp_overlap 602337, overlap 602337 GTTCAAAAAAAGAAA CTTTT AGATA AAAAG CTAAAAACTTTTGTT PAa_0607 602159 - 602449 + | hypothetical protein infB 602491 - 604362 + | Translation initiation factor 2 rbfA 604365 - 604709 + | Ribosome-binding factor A TERM 854 604710 - 604720 + F 80 -2.6 -6.04324 | opp_overlap 604710, overlap 604715 GATATCAAGAAGTAA TTTT TTA AAAA TTTTTTATTTTTTCA TERM 855 605082 - 605105 + F 78 -4.6 -5.55698 | opp_overlap 605069 605086 605088, overlap 605086 AATTTTTTATATAAA AAAAGGGCTT TAAA AAGCTCTTTC TTTTTTTCAATTATA TERM 856 605086 - 605101 + F 78 -5.4 -5.21683 | opp_overlap 605086 605088, overlap 605082 TTTTATATAAAAAAA GGGCTT TAAA AAGCTC TTTCTTTTTTTCAAT TERM 857 605101 - 605086 - f 77 -3.2 -5.71712 | opp_overlap 605082 605086, overlap 605088 TTTTATATAAAAAAA GGGCTT TAAA AAGCTC TTTCTTTTTTTCAAT TERM 858 605860 - 605850 - g 82 -5.4 -5.52384 | TTTGCACCAAAAAAA GCAA ATA TTGC AAAATATTGACAAGA pth 605383 - 605952 + | Peptidyl-tRNA hydrolase TERM 859 605953 - 605983 + T 85 -11.4 -2.75997 | opp_overlap 605958, overlap 605958 AACGTAATAAAATAA AAAAAGCAAGTAAT TTA ATTACTTGCTTTTA ATTCATTTGTAGCGA TERM 860 605978 - 605958 - T 100 -11.3 -6.17669 | opp_overlap 605958 605953 AATAAAATAAAAAAA GCAAGTAAT TTA ATTACTTGC TTTTAATTCATTTGT TERM 861 605958 - 605978 + T 100 -11.3 -4.53774 | opp_overlap 605958, overlap 605953 AATAAAATAAAAAAA GCAAGTAAT TTA ATTACTTGC TTTTAATTCATTTGT PAa_0611 607280 - 605967 - | Putative transporter TERM 862 607473 - 607489 + r 73 -2.3 -5.79595 | overlap 607468 607474 607479 AAAATTATTGTTTTT TGGTTTT AAA AAAATCG TTTTTTATTTTGGGA PAa_0612 608278 - 607835 - | hypothetical protein rpoD 609718 - 608288 - | RNA polymerase sigma factor TERM 863 609771 - 609786 + r 74 -4.8 -5.252 | overlap 609766 ATTAGTTTATTTTTT CTAAAA GTTT TTTTAG TTTTTTCTGCAAATC dnaG 611505 - 609757 - | DNA primase TERM 864 610140 - 610150 + g 71 -2.6 -5.40072 | CTAATGCATCATTAT TTAT TTG ATAA TTTTTTTCAAAAAAA GRS1 612868 - 611510 - | Glycyl-tRNA synthetase, class II era 614064 - 613186 - | Glycyl-tRNA synthetase TERM 865 614104 - 614114 + r 70 -2.6 -5.45652 | TCGTTCTAAGTTAAT TTTT TTT AAAA TTTTTTCTTGCAAAT PAa_0617 614514 - 614080 - | hypothetical protein TERM 866 614333 - 614277 - G 100 -6.9 -5.59962 | overlap 614321 CAAAACAAATAAAAA CATCTCCTAAAGAATCATCTTTTAA ATTAGGA TTAAAAGAAAATTCATTGGGAAATG ATAAAACATCTGTAA TERM 867 614604 - 614621 + r 75 -4.1 -5.46629 | opp_overlap 614604 AAAAAAAGGAAAAAA GCAACTT TTTT AAGTAGC TTTTTTTAACGTCTT TERM 868 614621 - 614604 - R 75 -4.1 -5.62552 | opp_overlap 614604 AAAAAAAGGAAAAAA GCAACTT TTTT AAGTAGC TTTTTTTAACGTCTT rpsU 614800 - 614627 - | 30S ribosomal protein S21 PAa_0619 615798 - 615205 - | Similar to phage-related protein predicted endonuclease TERM 869 615234 - 615272 + g 70 -8.4 -2.60194 | overlap 615233 GGAGTTTTTCTTGGA GTTGTTTGCTTTTTTGAA ACA TTTGAAAAAACAAACGAC ATTGATTAACAAGAT TERM 870 615375 - 615359 - G 90 -3.7 -5.95539 | overlap 615362 TGGTAAACAAAAAAA TAAGCTT TGC AAGCTTC AGAACAATATATTTG TERM 871 615372 - 615362 - G 77 -5.4 -5.01858 | overlap 615359 TAAACAAAAAAATAA GCTT TGC AAGC TTCAGAACAATATAT TERM 872 615845 - 615857 + r 80 -2.7 -6.09196 | GATATGGGGAGATGA TGTTT TTT AGACA TTTTTTTGTTTTAAA TERM 873 615894 - 615858 - R 73 -9.1 -2.87344 | opp_overlap 615860, overlap 615875 GATGTTTTTTAGACA TTTTTTTGTTTTAAAAA TAT TCTTTAAAACTAAAAAA TAATAGATAATTTCA TERM 874 616169 - 616145 - R 93 -12.3 -3.15638 | opp_overlap 616144 616143, overlap 616149 AAAATGTACAGTGAA GCAACCTCTTT TTA AAAAAGGTTGC AGTTGATTTTATCAT PAa_0620 617140 - 616196 - | Putative phage integrase TERM 875 616416 - 616441 + g 72 -4.9 -4.84219 | GCTTTGCTGGACATG CTGATTAAAAG GCCT TTTTTAATTAG TTTATTTTGTACTTT TERM 876 619054 - 619025 - g 81 -7.3 -4.68506 | opp_overlap 619028 AAGGAACTGGAAAAA CAACTTTAGCCAA AATA TTTGCTAAAGTTA TTAATTGCATATATC dnaX 618865 - 620673 + | DNA polymerase III, gamma/tau subunit PAa_0624 620696 - 620980 + | hypothetical protein TERM 877 620970 - 620996 + F 75 -8.2 -3.57561 | TGTCAGGCGATTTAT CTCAATTATGAA AGA TTGATAATTGAG TTTAAAAAATTAAAA PAa_0625 621028 - 621495 + | hypothetical protein TERM 878 621496 - 621513 + F 76 -4.3 -5.4477 | opp_overlap 621486 621496, overlap 621486 GAATATTTTTTATAA TAAAAAA ATTA TTTTTTA TTTTTTTAACACTTT pssA 621568 - 622233 + | Phosphatidylserine synthase TERM 879 622347 - 622324 - g 70 -8.4 -2.74496 | opp_overlap 622324, overlap 622323 622322 ACTTAGACAAAAACT TTTTTAAAAG AATC CTTTTAAAAA TACTTATCACAAAGC TERM 880 622324 - 622347 + G 71 -8.4 -2.82623 | opp_overlap 622324 622323 622322 ACTTAGACAAAAACT TTTTTAAAAG AATC CTTTTAAAAA TACTTATCACAAAGC TERM 881 622948 - 622919 - g 74 -5.1 -5.0925 | TGGTAAAATCAAAAA TCACCTTTGCAAA AATT TTCAAAAAGGTGA AGAAAAAGGTTATTT psd 622233 - 623105 + | Phosphatidylserine decarboxylase pyrG 623179 - 624822 + | CTP synthase TERM 882 624951 - 624901 - T 73 -2.2 -5.73672 | opp_overlap 624912, overlap 624904 624912 AAACAACTAAAAAAA TATCAAAAAAAGCTAAATTG TCATAAACGTT CAATTTAGCTTTATTTATTA TAATGAAGAAATTAA TERM 883 624940 - 624912 - T 77 -3.3 -5.69023 | opp_overlap 624912, overlap 624904 624901 AAAATATCAAAAAAA GCTAAATTG TCATAAACGTT CAATTTAGC TTTATTTATTATAAT PAa_0629 625398 - 624949 - | hypothetical protein dnaD 626082 - 625468 - | Putative DNA replication protein TERM 884 626118 - 626137 + r 86 -2.8 -6.5058 | overlap 626121 AATAACTTTTAATAA TGACTCTC TCGG GGGGGTTA TTTTTTTTTATTTGT rnc 626878 - 626210 - | DsRNA-specific ribonuclease TERM 885 626533 - 626523 - G 70 -5.4 -4.52345 | opp_overlap 626526, overlap 626532 ATAGCACCAAACAAA GCTT CAA AAGC ATCAGCAATAATGCT plsX 627927 - 626875 - | Fatty acid/phospholipid biosynthesis enzyme TERM 886 627512 - 627530 + g 78 -2.4 -5.81032 | overlap 627513 ATGGGAGCTATAGCT ATTCTTTG CAT CAAAGGAA TTTTTTTTAAAATTA TERM 887 628712 - 628702 - H 76 -2.6 -5.85011 | TAAAAACTAAAAAAA TTAT TAA ATAA AATTAGAATTGATTA norM 629135 - 630658 + | Na+-driven multidrug efflux pump TERM 888 630781 - 630804 + T 87 -6 -5.67063 | TTAAAAAAAAATTGG GACTGACTTA TTTT TTAGTCGGTC TTTTTTTGTACTCAA TERM 889 631227 - 631209 - T 71 -5.4 -4.57073 | opp_overlap 631210, overlap 631210 CATCTTTTCTAAAAA CGTTTTTT TTA AAAAAACA CTGTCATAAATTACA TERM 890 631635 - 631616 - T 83 -6.5 -5.24989 | TTAGATATTAAAAAA CTCCAAA AGCAAA TTTGGAG TTAAAATAAAGGATT topA 634017 - 632050 - | Topoisomerase IA PAa_0635 634925 - 634038 - | GTPase of unknown function TERM 891 634179 - 634189 + g 78 -2.6 -5.75538 | ATCAATTTGTTGATT TTTA GTA TAAA TTTTTCTTTTTTCAC TERM 892 634486 - 634496 + g 71 -4 -5.14563 | CCAGCCAAATTAGCA GTTT TTA AAAC TTTTTTACTAGCAAA TERM 893 634877 - 634860 - G 78 -5.7 -4.91873 | overlap 634868 TATATCAACCAAAAA CAAATTA TTTT TAATTTG ATCAAAAGCTTTTTT TERM 894 635165 - 635154 - R 80 -3 -6.04324 | overlap 635162 TTAAAAAAGAAAAAA CAAA TACA TTTG AAAATATTTGCTATA PAa_0636 636074 - 635328 - | hypothetical protein efp 636755 - 636186 - | Elongation factor P (EF-P) TERM 895 636434 - 636452 + g 71 -2.4 -5.54338 | TTTCTACCAATAACC CTTCGTAA AGA TAATGAAG TTTTTCTTTTAATTG miaA 637631 - 636759 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 896 636848 - 636865 + g 74 -2.7 -5.63645 | overlap 636849 CAACAACCGGTTGCA ATTGGTT TTTA AACCAAG TTTTTTGTCTTTTAG PAa_0639 638520 - 637756 - | Putative metallophosphoesterase PAa_0640 640107 - 638539 - | Metal-dependent phosphohydrolase TERM 897 640230 - 640240 + r 82 -2.6 -6.25741 | AAGAAATTTTTTAAT TATT TGA AATA TTTTTTTTATTATTT TERM 898 640342 - 640317 - R 100 -7.9 -6.26417 | TATTATAAAAAAAAA TATTATTTTAT TCGA ATAAAATAATA AAAAGTGTAATAATA TERM 899 640426 - 640407 - R 77 -7.2 -4.5366 | opp_overlap 640407, overlap 640402 640400 TTAAAAAACTGAAAA GCTAACCT TAAG AGATTAGC TTTTATATGAAAAAA PAa_0641 640843 - 640484 - | hypothetical protein PAa_0642 642025 - 641006 - | Conserved hypothetical protein (DUF195) TERM 900 641956 - 641942 - G 77 -2.2 -5.75945 | ATTTTTCAAAAAAAA TTTACT TAA AATAAA AATTATAAAAATAGT TERM 901 642148 - 642174 + H 76 -9.4 -2.82834 | overlap 642154 GGGATTCGAACCCCC GACCGACGGCTT AGA AGGCCGTTGCTC TATCCTGCTGAGCTA TERM 902 642154 - 642168 + H 70 -7.8 -3.34088 | overlap 642148 CGAACCCCCGACCGA CGGCTT AGA AGGCCG TTGCTCTATCCTGCT TERM 903 642259 - 642276 + H 70 -4.3 -4.99435 | opp_overlap 642270, overlap 642260 642270 AAGGAAGCAATTATT TTTTTAA CTAA TTAAAAA TTTTTAATTATTAAA PAa_0643 642832 - 643500 + | hypothetical protein TERM 904 644219 - 644229 + G 77 -5.4 -5.02074 | AAAAAATTAGGATCA CAAG AAG CTTG TTTTTTAACACATAC gidA 643520 - 645364 + | Glucose inhibited division protein A gidB 645351 - 645977 + | Glucose-inhibited division protein B TERM 905 646017 - 645982 - f 100 -15 -3.76174 | opp_overlap 645987, overlap 645987 AAACTCATTAAAAGA TAAAATAAGGCCACTA AAAA TAGTGGCCTTATTTTT TTCCCGTAACTCTTA TERM 906 645987 - 646012 + F 100 -14.9 -5.44119 | opp_overlap 645982 645987 CATTAAAAGATAAAA TAAGGCCACTA AAAA TAGTGGCCTTA TTTTTTTCCCGTAAC TERM 907 646012 - 645987 - f 100 -14.9 -4.91977 | opp_overlap 645987, overlap 645982 CATTAAAAGATAAAA TAAGGCCACTA AAAA TAGTGGCCTTA TTTTTTTCCCGTAAC TERM 908 646359 - 646338 - f 73 -7.5 -3.69252 | opp_overlap 646342 646358, overlap 646336 646342 AAGAGAGAAATAATA TAAATTGAA ATTA TTCAATTTA AAAGTTATTCAAATA TERM 909 647711 - 647666 - f 89 -8.7 -4.71828 | gap 1, opp_overlap 647674 ATTTTATTAATAAAA TTGTATAATGGTGATAAGTGAT ATA ATTAATTATCACCATTAT-CAA GAAAGGTAAACAAAT TERM 910 647674 - 647704 + F 80 -9.2 -3.28924 | opp_overlap 647666 AATAAAATTGTATAA TGGTGATAAGTGAT ATA ATTAATTATCACCA TTATCAAGAAAGGTA PAa_0648 647729 - 648562 + | hypothetical protein TERM 911 648952 - 648942 - g 74 -4 -5.29716 | GCAATATAACAAAAA TTCA ACT TGAA AGAGAACATTTATCA PAa_0649 648587 - 649144 + | hypothetical protein TERM 912 649337 - 649321 - g 73 -8.1 -3.40558 | overlap 649319 649331 TATATAGCCCAAACA GGAAAAA CAC TTTTTCC AGAAAAAATTGAAGC gepA 649180 - 649650 + | Uncharacterized phage-associated protein TERM 913 649712 - 649692 - g 72 -5.6 -4.48743 | AAAACTTTAAATAAA GATAATTT TGAAG AAATTATC AAAACAATTCATAGT PAa_0651 649674 - 650273 + | hypothetical protein TERM 914 652033 - 652052 + F 100 -7.8 -5.82316 | opp_overlap 652034, overlap 652034 TATTAATTGATATTA AGACCTCC AAAT GGAGGTCA TTTTTTTTGGCTCAT TERM 915 652034 - 652051 + F 100 -11.3 -4.07763 | opp_overlap 652034, overlap 652033 ATTAATTGATATTAA GACCTCC AAAT GGAGGTC ATTTTTTTTGGCTCA TERM 916 652051 - 652034 - f 93 -11.3 -3.30006 | opp_overlap 652034 652033 ATTAATTGATATTAA GACCTCC AAAT GGAGGTC ATTTTTTTTGGCTCA PAa_0653 652402 - 652881 + | hypothetical protein PAa_0655 653229 - 653777 + | Putative methylase TERM 917 654319 - 654292 - T 85 -8.4 -4.63089 | gap 1, overlap 654289 CACTCTAAAAAAGAA GGCGGTTA-TCGC GAA GCGAACTACCGCC CCAAAAATCAAATTC TERM 918 655023 - 655008 - T 91 -10.4 -3.4968 | overlap 655003 ATGAGAAAAATCTAA GAGCCC TCAA GGGCTC AGATAAAGCATAAAC TERM 919 656021 - 655996 - T 79 -7.1 -4.69559 | AAAGTGCAAAATAAA CTAATTAAAAA AGGC TTTTTAATCAG CATGTCCCACAAAGC TERM 920 656591 - 656579 - T 73 -2.7 -5.79595 | TTTTAAAACAAAAAA TGTCT AAA AAACA TCATCTCCCCAAATA TERM 921 656872 - 656842 - T 100 -9.3 -5.06103 | gap 1, opp_overlap 656851 656865 656866, overlap 656851 ATAATTTCTAAAAAA TGAAAAAAAGCCTT TTTT AAGGCT-TTTTTCA AAAAAATTATTTTAA TERM 922 656864 - 656851 - T 93 -6.7 -5.88061 | opp_overlap 656851, overlap 656842 AAAAAATGAAAAAAA GCCTT TTTT AAGGC TTTTTTCAAAAAAAT TERM 923 656851 - 656864 + T 80 -6.7 -5.00884 | opp_overlap 656842 656851 AAAAAATGAAAAAAA GCCTT TTTT AAGGC TTTTTTCAAAAAAAT tufB 658063 - 656879 - | Translation elongation factor EF-Tu TERM 924 658068 - 658084 + r 86 -9.5 -4.13183 | overlap 658059 TCATTAGCCATTTTG CAAAAGG CCT CCTTTTG TTTCGTTTAGGTTTT TERM 925 658162 - 658172 + r 73 -2.6 -5.64006 | overlap 658154 TCAACTGTTTTATAT TAAA AAT TTTA TTTTTTTAATTAACT fusA 660248 - 658182 - | Elongation factor G TERM 926 659800 - 659780 - G 76 -9.1 -3.14344 | opp_overlap 659780 TAGGGTTTGCATGAA CTCCTAATC TTT GATTAAGAG TTTCTACAGCATATT rpsG 660747 - 660277 - | 30S ribosomal protein S7 rpsL 661234 - 660815 - | 30S ribosomal protein S12 rpoC 665326 - 661262 - | DNA-directed RNA polymerase beta chain TERM 927 663385 - 663403 + g 76 -3.9 -5.38497 | CTTGAGAAACTTTGA GGTCTTT AGCGA AAAGATC TTTTTTAGTTTCAAT TERM 928 664482 - 664492 + g 74 -4 -5.28942 | CTATATTGACTTTTG GAAA TAA TTTC TTTTTCTTTAAAATC TERM 929 665112 - 665122 + g 71 -2.6 -5.47218 | TCAATAATATCGTTG TTAA GGT TTAA TTTTTTTAAATCACG rpoB 669052 - 665330 - | DNA-directed RNA polymerase beta chain TERM 930 668230 - 668257 + g 77 -2.2 -5.86061 | gap 1, overlap 668234 GTTTTTTATTAAATT TAT-ATCTTCCAA CTG TTGTAAGATCATA TTTTTTTTGATCAAA TERM 931 669084 - 669099 + r 70 -4.8 -4.87291 | TTATTTAGTTATGTT TTTTTG TTGA CAAAAA TTTTTCATTAAAGTA TERM 932 669199 - 669149 - R 88 -5.2 -5.94214 | gap 1, opp_overlap 669160 669166, overlap 669151 AATACAATAAAAAAA TATTAAAGAATA-AAAAACCTGA ATTATA TCAGGTTTTTATATCATTTAACA AGAAAATAATTTATT TERM 933 669197 - 669151 - R 71 -5.6 -4.57921 | gap 1, opp_overlap 669160 669166, overlap 669149 TACAATAAAAAAATA TTAAAGAATA-AAAAACCTGA ATTATA TCAGGTTTTTATATCATTTAA CAAGAAAATAATTTA TERM 934 669166 - 669181 + r 72 -4.7 -5.06585 | opp_overlap 669151 669149, overlap 669160 TTAAAGAATAAAAAA CCTGA ATTATA TCAGG TTTTTATATCATTTA rplL 669584 - 669210 - | 50S ribosomal protein L7/L12 rplJ 670129 - 669629 - | 50S ribosomal protein L10 TERM 935 670099 - 670089 - G 71 -4 -5.00616 | opp_overlap 670075 670089 TTTTCTTGCAAAAAA GAAA CTG TTTC TATTTTTTTAGCTAA rplA 670876 - 670187 - | 50S ribosomal protein L1 rplK 671318 - 670893 - | 50S ribosomal protein L11 nusG 672045 - 671431 - | Transcription antitermination protein secE 672452 - 672042 - | Protein translocase subunit SecE yacO 673462 - 672761 - | tRNA/rRNA methyltransferase mgtA 675896 - 673464 - | Cation transport ATPase TERM 936 675273 - 675259 - G 72 -6.4 -4.28323 | opp_overlap 675259 675259 675264, overlap 675253 675239 ATGAACGAAGATAAA CCCTTC ATC AAAGGG GTTTGAGGTTGTTTA TERM 937 675770 - 675760 - G 71 -2.6 -5.49729 | AAGGAGTTAAAAAAA TTAT TAA ATAA AATATCCTTAAAACT pnp 678094 - 675962 - | Polyribonucleotide nucleotidyltransferase TERM 938 677660 - 677648 - G 76 -9.1 -3.12884 | overlap 677647 ATAGGCAACATAAAC GCCTG CAA CAGGC TCAAAAAAGGGGATT TERM 939 677895 - 677874 - G 80 -5.9 -5.00616 | gap 1 TCTCTTCTCAAAAAA CTGCCAGGAA TTT TTCC-AGCAG CATAAAATTTTTCTT TERM 940 678190 - 678159 - R 79 -3.9 -5.71295 | gap 1, opp_overlap 678159 ATATAAAAATAAAAA GCTAGTGT-TTGAA CCGCT TTCAACAAACTAGC TTATTTGAACTTTTC TERM 941 678350 - 678337 - R 73 -2.3 -5.73563 | ACGAAATTAAAAAAA TGGCG CCCA CGCTA GGACTCGAACCTAGG TERM 942 681447 - 681458 + r 75 -7.2 -4.2354 | AAGATCTATTTCACT CCCC TTTC GGGG TTCTTTTCACCTTTC TERM 943 682033 - 682049 + r 72 -8.7 -2.62396 | overlap 682035 TTGAACCACCGACCT CACGCTT ATC AGGCGTG TGCTCTAACCAACTG TERM 944 683950 - 683930 - R 82 -2.7 -6.20267 | opp_overlap 683933, overlap 683932 683933 683934 TTAAAAAGAAAAAAA CACTTTTTT TTA AAAAAAATA AAAAAAATATAATAG TERM 945 683995 - 683958 - R 90 -3.1 -6.47325 | gap 1, opp_overlap 683963, overlap 683960 683963 AAAAAATAAAAAAAA TATAATAGACAATAAA AAAAAGA TTTATTGTCTATT-CA TTAAAGGGATTTATT TERM 946 683994 - 683960 - R 76 -6 -4.77908 | opp_overlap 683963, overlap 683958 683963 AAAATAAAAAAAATA TAATAGACAATAAA AAAAAGA TTTATTGTCTATTC ATTAAAGGGATTTAT TERM 947 683991 - 683963 - R 78 -7.7 -4.36984 | opp_overlap 683963, overlap 683960 683958 ATAAAAAAAATATAA TAGACAATAAA AAAAAGA TTTATTGTCTA TTCATTAAAGGGATT TERM 948 683963 - 683991 + r 70 -7.7 -3.34192 | opp_overlap 683960 683958 683963 ATAAAAAAAATATAA TAGACAATAAA AAAAAGA TTTATTGTCTA TTCATTAAAGGGATT yidC 685411 - 683996 - | Preprotein translocase subunit YidC TERM 949 684328 - 684310 - G 72 -6 -4.45024 | opp_overlap 684309 684314, overlap 684307 684314 ATAATAAAGAAACAA CAAACCAA TGA TTGGGTTG ATTGAATTTAATAAA TERM 950 684324 - 684314 - G 73 -5.4 -4.71584 | opp_overlap 684314 684309, overlap 684310 684307 TAAAGAAACAACAAA CCAA TGA TTGG GTTGATTGAATTTAA rnpA 685785 - 685438 - | Ribonuclease P protein component rpmH 686067 - 685933 - | Ribosomal protein L34 proS 687596 - 686172 - | Prolyl-tRNA synthetase TERM 951 687782 - 687765 - R 82 -2.1 -6.20267 | opp_overlap 687775, overlap 687775 TTAAAAACAAAAAAA TTTCAAA AAGT TTTAAAA ATAAAATTAATGGCG TERM 952 688117 - 688097 - R 76 -2.7 -5.93809 | GGGCCACAAAAAAAA TTAACAAAA AGA TTTCATTAA AGCTTCAATTTCTGT pepP 689359 - 688097 - | Xaa-Pro aminopeptidase TERM 953 688246 - 688259 + g 74 -6.7 -4.40804 | AAAGACCTGGTTCCA CAGTG ATAA CACTG TTTTCTCCAATAATA TERM 954 688987 - 688974 - G 74 -2.3 -5.56372 | AAATCAAAATAAAAA GCATC AATC GAAGC AGTGGAAAAACTTCT rpmG 689570 - 689421 - | 50S ribosomal protein L33 TERM 955 689509 - 689523 + g 78 -5.8 -4.89567 | GTTTTTTTCTTATTT TTATCA GTA TGATAA TTTTCTCTTTTGCAA PAa_0681 690515 - 689616 - | hypothetical protein TERM 956 690241 - 690226 - G 72 -4.8 -4.88786 | ATTAAAACAAATAAA TTACTT TGAT AAGTAA AATAAAAATACATTT TERM 957 690561 - 690551 - R 70 -2.6 -5.56112 | ACAAAAACTAAAAAA TTAA CTA TTAA AAACTAAAGGTTTGC PAa_0682 690778 - 690551 - | hypothetical protein TERM 958 690881 - 690840 - R 100 -8.4 -5.7506 | opp_overlap 690843 690852 690870, overlap 690852 CAAAAAAAAATAAAA TAATAAAAAAAACAAACT TTTTTT AGTTTGTTTTTTTTAACA AAAAAGATATTCAAA TERM 959 690869 - 690852 - R 90 -4.2 -6.25741 | opp_overlap 690843 690852, overlap 690840 AAATAATAAAAAAAA CAAACT TTTTTT AGTTTG TTTTTTTTAACAAAA TERM 960 690852 - 690869 + r 82 -4.2 -5.75342 | opp_overlap 690852 690840, overlap 690843 AAATAATAAAAAAAA CAAACT TTTTTT AGTTTG TTTTTTTTAACAAAA huP 691199 - 690915 - | DNA-binding protein HU gpsA 692285 - 691296 - | Glycerol-3-phosphate dehydrogenase TERM 961 692426 - 692436 + r 76 -2.6 -5.83226 | CTTAAATTGATTTGA TTAT TTT ATAA TTTTTTTGTTGGATT PAa_0685 693225 - 693043 - | hypothetical protein TERM 962 693296 - 693269 - H 78 -4.4 -5.48163 | opp_overlap 693261 693269, overlap 693287 AAACAAATGAAAAAA TAATTTTTTATT AACT AATAAATAATTA TTTAAGTTCGCTAAG TERM 963 694053 - 694072 + H 78 -6.4 -4.77757 | opp_overlap 694053 694056 TTAACTAAAGATGAA TAAGGGGG ATAG CCACCTTA TTTTGGTTTTTAAAC TERM 964 694874 - 694859 - H 77 -4.8 -5.36018 | opp_overlap 694859 ATTAAAAAAAACAAA TTTTTC ATCT GAAAAA ATTATAAATTATCAC TERM 965 694940 - 694956 + H 77 -6.7 -4.63748 | opp_overlap 694945, overlap 694945 AATTTGGAAATAGTT CAAATTA AAG TAATTTG TTTCTTTACTTATTT TERM 966 695287 - 695272 - g 83 -4.8 -5.59564 | ACAAATTGAAAAAAA CATTTT ATTA AAAATG TACAAAACTATGGTT TERM 967 695646 - 695636 - g 75 -5.4 -4.94109 | overlap 695640 CAAAATAAAAAAGAA GCAA CAA TTGC AACTATTGGTGATGG pdhA 695168 - 696259 + | Pyruvate dehydrogenase E1 component,alpha subunit TERM 968 697213 - 697202 - g 73 -4.4 -5.03145 | opp_overlap 697210 TAAGTCCTGAAAAAA TAGC TGCT GCTA TTCGCAAAGTAGCTT pdhB 696262 - 697239 + | Pyruvate dehydrogenase E1 comp, beta subunit pdhC 697260 - 698483 + | Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) TERM 969 698920 - 698931 + G 75 -7.2 -4.25458 | opp_overlap 698920 CTTATTATTGCAACA GGCG CTAC CGCC TTTATTCCTCCAATT TERM 970 699364 - 699348 - g 100 -6.7 -5.64274 | opp_overlap 699351 TGATTTAGAAAAAAA TAACAAT AGT ATTGTTA CTGATGAATTTTTAC pdhD 698506 - 699879 + | Dihydrolipoamide dehydrogenase TERM 971 699898 - 699918 + F 82 -2.6 -6.17669 | opp_overlap 699899, overlap 699899 TGAAGACAAATAAAA ACTAACTT TTTTT AAGTTAGC TTTTTTTATTTTATT TERM 972 699899 - 699917 + F 70 -6.1 -4.25111 | opp_overlap 699899, overlap 699898 GAAGACAAATAAAAA CTAACTT TTTTT AAGTTAG CTTTTTTTATTTTAT TERM 973 699917 - 699899 - f 85 -6.1 -5.4659 | opp_overlap 699899 699898 GAAGACAAATAAAAA CTAACTT TTTTT AAGTTAG CTTTTTTTATTTTAT tatD 700406 - 701173 + | Mg-dependent DNase TERM 974 701455 - 701434 - T 95 -5.8 -6.02546 | opp_overlap 701436, overlap 701436 TTAAATTAAAAAAAA TAGCCCTC TAGCTT GAGGGCTT TAATTATTGCAAAAA TERM 975 701436 - 701453 + T 79 -8.4 -4.07618 | opp_overlap 701436 701434 AAATTAAAAAAAATA GCCCTC TAGCTT GAGGGC TTTAATTATTGCAAA TERM 976 701453 - 701436 - T 85 -8.4 -4.63519 | opp_overlap 701436, overlap 701434 AAATTAAAAAAAATA GCCCTC TAGCTT GAGGGC TTTAATTATTGCAAA TERM 977 701485 - 701503 + T 78 -5.4 -5.2189 | opp_overlap 701485 AAATCTTTTTATTAA TTTTTGTT GTT GACAAAAA TTTTTTAATGATTAC PAa_0691 702717 - 701914 - | hypothetical protein TERM 978 702028 - 702038 + g 80 -4 -5.61596 | AGCATCTTTTAATAT TTGT AAA ACAA TTTTTTTGTCAAAAT TERM 979 702200 - 702213 + g 71 -2.4 -5.38054 | ATTTCGAACCAATCG GGTA ATTTAA TACC TTTTTCTTTATCAGC TERM 980 703405 - 703385 - R 82 -5.5 -5.54894 | opp_overlap 703378 AACTTATTAAAAAAA GCTAAACCT TAA AAATTTAGC TTTTTTATTATTTGA PAa_0692 703676 - 703413 - | hypothetical protein uvrD 705831 - 703690 - | ATP-dependent DNA helicase TERM 981 704267 - 704292 + g 70 -4.7 -4.67168 | opp_overlap 704268 704272, overlap 704268 AATTCTTCTATAGCA ACTAACGATGA TTGC TCTTCGTTAGC TTTTTGAGGGTTTTT TERM 982 704291 - 704268 - G 71 -8.2 -3.25942 | opp_overlap 704267 704268, overlap 704272 ATTCTTCTATAGCAA CTAACGATGA TTGC TCTTCGTTAG CTTTTTGAGGGTTTT TERM 983 704268 - 704291 + g 73 -8.2 -3.38674 | opp_overlap 704268 704272, overlap 704267 ATTCTTCTATAGCAA CTAACGATGA TTGC TCTTCGTTAG CTTTTTGAGGGTTTT glnS 707475 - 705844 - | Glutaminyl-tRNA synthetase TERM 984 705870 - 705891 + g 71 -2.5 -5.43487 | gap 1, opp_overlap 705870, overlap 705876 TACTTACTTTTAAAC TTACTATTTT ATT AAAAT-GTAA TTTTTTATCTGCTTT TERM 985 707029 - 707044 + g 70 -5.4 -4.52042 | overlap 707027 ATCTTCTATGCTACG TTCGCG ACAA CGTGAA TTTGTTCCTTTTTCT TERM 986 707843 - 707856 + r 73 -2.4 -5.63857 | TTTTTATAATCTTCA CAAC TGCGCT GTTG TTTTTTTAGGTTTTT TERM 987 707922 - 707941 + r 84 -9.4 -3.72532 | opp_overlap 707922, overlap 707918 AAGAGATAAAAAAAA GACTAACT TTTC AGTTAGTC TTAATTTATTAATTA TERM 988 707941 - 707922 - R 100 -9.4 -6.08563 | opp_overlap 707922 707918 AAGAGATAAAAAAAA GACTAACT TTTC AGTTAGTC TTAATTTATTAATTA PAa_0695 708293 - 707958 - | hypothetical protein PAa_0696 708846 - 708286 - | hypothetical protein TERM 989 708491 - 708471 - G 75 -3.3 -5.40072 | GTCGTTGCAAAAAAA CACTAAAAA CTT TTCTTTGTG TTTCTCCTTGAAAAA PAa_0697 709588 - 709352 - | hypothetical protein PAa_0698 710125 - 709949 - | hypothetical protein TERM 990 710952 - 710971 + H 100 -10.8 -4.88405 | opp_overlap 710951 710950 710954 TTATTAACATTAAGT CATTCGCA TCCT TGCGAATG TTTTCTTTGACAATT TERM 991 711708 - 711698 - H 73 -3.2 -5.49729 | overlap 711699 711700 AATTATTCAAAAAAA GCTG CTG CAAC AACAAAAAATAGCCA TERM 992 711992 - 711964 - H 72 -7.7 -3.5944 | overlap 711950 TTAAAAAATTTATAA TTTTTTTTCTTTT TTT AAAAGAAAGAAAA AGACTAACTGAAAAA uvrA 712098 - 714923 + | Excinuclease ATPase subunit A TERM 993 715536 - 715526 - g 84 -4 -5.89921 | overlap 715518 ACTAGAAGAAAAAAA TTTC AAA GAAA AAAAAGACTTTCATT TERM 994 715699 - 715689 - g 76 -4 -5.5353 | GACAGTAAGAAAAAA TTAG TTC CTAA AAACAGTAACGTTTT tig 715233 - 716519 + | Trigger factor (TF) TERM 995 716589 - 716569 - g 74 -2.6 -5.73672 | AAATAATGAAAAAAA CTAAAACT GTTGT AGATTTAG AACAAAACACACAAA TERM 996 717652 - 717626 - g 77 -2.2 -5.88471 | overlap 717627 TATGACCAAAAAAAA TCCTCAAAACAT TTT ATGTTTAGTGGG TCCACCAGGGGTTGG TERM 997 718298 - 718287 - g 81 -3 -5.84011 | AACAAAAAAGAAAAA GTTA TCAT TAAC ACTCAAAATGTTTCT TERM 998 718370 - 718335 - g 70 -2.9 -5.30616 | gap 1 TTAGGTAAAGAAAAA TATTTGCATCTTTT AGCAGAAGA AAAAGA-GCAAATA GGATCAACTAATGGT TERM 999 718772 - 718755 - g 76 -4.1 -5.50723 | GGATTAAAAGAAAAA GCTATTG CTGC CAATCGC AGTGGCCTTAACACT lon 716544 - 718907 + | ATP-dependent Lon protease TERM 1000 718953 - 718933 - T 100 -10.5 -5.79595 | opp_overlap 718933 TTTTAAAATAAAAAA TACCACCCT AAA AGAGTGGTA TTTTTTTTATCTTTT TERM 1001 718933 - 718953 + T 100 -8.3 -6.18768 | opp_overlap 718933 TTTTAAAATAAAAAA TACCACCCT AAA AGAGTGGTA TTTTTTTTATCTTTT TERM 1002 719080 - 719064 - T 78 -5.3 -5.19916 | overlap 719056 719053 AAAATATTTAAAAAA TTTTTTA ATA TAAAAAA ATAAATAAAAATGTA TERM 1003 719231 - 719208 - T 82 -4.6 -5.73672 | AAATAAGTAAAAAAA GCTTTGAG GTTTTATT CCCAAAGC TCGTAACTATTTGAC TERM 1004 719332 - 719316 - T 75 -5.3 -5.08011 | AAAATCTTTAAAAAA TTTTTTA ATA TAAAAAA ATAAAAATGTAATTA TERM 1005 719569 - 719588 + T 72 -5.2 -5.0133 | overlap 719555 TTTTTAAAATTATTT TTAAAATT AATA AATTTTAA TTTTTTCCAGCAATA pmbA 720805 - 719585 - | Pmba-related protein TERM 1006 719864 - 719876 + g 74 -4.9 -5.17353 | opp_overlap 719860 719864 AATTGGAGCAATCAA TTCTT GAA AAGAA TTTTTTCCTGGCTCT tldD 722282 - 720885 - | Zn-dependent proteases, TldD TERM 1007 721360 - 721377 + g 80 -4.2 -5.61824 | TATCCTTTTAAAATT CCTTTT TCAATT AAAAGG TTTTTTTGGGTTTTG TERM 1008 721641 - 721663 + g 77 -4.9 -5.31456 | CAATAAAGAAACTGC TTGCACG GCAACTTCG CGTGCAA TTTTTTCTAAGTTGA TERM 1009 722536 - 722548 + H 70 -2.7 -5.45802 | CAAATGGGGAGATGA TGTTT TTT AGACA TTTTTGTTTTAAAAA TERM 1010 722715 - 722698 - H 76 -2.7 -5.84381 | opp_overlap 722698 722696 GTATGAATAAAAAAA CTAACTT TTTA AAGTTGG TCTTATTGGAATAAT PAa_0704 723621 - 723800 + | hypothetical protein TERM 1011 723890 - 723875 - T 100 -7.6 -5.69068 | opp_overlap 723870 723875 723880, overlap 723879 723880 CAAAAATACAAAAAA GAGACT GAAA AGTCTC TTTTCATTTGGAAAG TERM 1012 723875 - 723890 + T 81 -7.6 -4.54727 | opp_overlap 723875 723879 723880, overlap 723870 723880 CAAAAATACAAAAAA GAGACT GAAA AGTCTC TTTTCATTTGGAAAG TERM 1013 723880 - 723896 + T 75 -8.1 -3.57561 | opp_overlap 723875 723879 723880, overlap 723875 723870 ATACAAAAAAGAGAC TGAAAAG TCT CTTTTCA TTTGGAAAGTTAAAA hit 724522 - 724109 - | Diadenosine tetraphosphate hydrolase TERM 1014 724952 - 724935 - H 73 -5.7 -4.74787 | ATAAACACAAACAAA TTAATCT TGCA AGATTAA AAACCAAAAAACTCA TERM 1015 725070 - 725088 + H 76 -4.6 -5.3236 | TGAGTGTTTCTTTAT CCAAAAAT GAT ATTTATGG TTTTTTGTAAATTCT PAa_0706 725224 - 725505 + | hypothetical protein rnhC 726550 - 725645 - | Ribonuclease HII family protein TERM 1016 726203 - 726187 - G 71 -2.4 -5.38958 | opp_overlap 726188, overlap 726188 726189 ATTCAGAAAGAAAAA TTTTTT TTTGG AAAAAA GTAATGTTTTGAGGA TERM 1017 726539 - 726553 + g 86 -7.2 -5.16071 | opp_overlap 726538 ATTTAATTTTAAAGT GAAATG TGA CATTTC TTTTTCTTAATCCTT TERM 1018 726826 - 726809 - R 82 -4.3 -5.75945 | ATTTCTCAAAAAAAA TATAAAA TGTT TTTTATA GCCGAGACAAGTTGT PAa_0708 728250 - 728032 - | hypothetical protein TERM 1019 728427 - 728444 + G 75 -5.7 -4.68506 | opp_overlap 728425 728426 TGTCATTTATTAAGT TGTTTTT GGAA AAAAACA TTTTTAGACTTAATT TERM 1020 728455 - 728468 + G 71 -2.5 -5.47399 | AAACATTTTTAGACT TAATT TGAA AATTA TTTTTTTAGGCTTCA PAa_0709 728285 - 728593 + | hypothetical protein cbf1 729647 - 728697 - | Cmp binding factor 1 pcnB 730872 - 729634 - | Poly(A) polymerase TERM 1021 730090 - 730074 - G 70 -3.1 -5.2696 | overlap 730076 GGAAAAGGGAAAAAA TATTTTT GTT AAAAACA AATGCAATGCTCCAA TERM 1022 730958 - 730941 - R 90 -5.6 -5.87996 | opp_overlap 730941 TAATTAATAAAAAAA GACCAT TAAAAG ATGGTC TTTATAATAAAATAG codA 731460 - 730960 - | Cytidine/deoxycytidylate deaminase family protein TERM 1023 731298 - 731316 + g 73 -7.6 -3.73122 | AAAATTCAGCATGAC CAAAAAAA AGG TTTTTTTG TTTCCGATTGTTGTG tdk 732094 - 731495 - | Thymidine kinase rpmE 732382 - 732143 - | 50S ribosomal protein L31 rpmB 732614 - 732429 - | 50S ribosomal protein L28 PAa_0716 732909 - 733289 + | hypothetical protein TERM 1024 733385 - 733405 + T 80 -3.3 -5.9667 | AATAAAAATTAATAA GAGATTAAA CTT TTTTGTCTC TTTTTTTATCTTTTT TERM 1025 733430 - 733456 + T 79 -9.8 -2.6989 | opp_overlap 733429 CTTTTTTTGATGAAT TTTATTATTTTT TTA AAAAATAATAAA TGAATTTGGTAATTT TERM 1026 733494 - 733484 - T 71 -5.4 -4.63218 | opp_overlap 733484 TTTTTTTCAATAAAA CAAC TCT GTTG CTTATTTTCTTATTA TERM 1027 733630 - 733592 - T 93 -9.8 -4.15222 | opp_overlap 733592 733603, overlap 733600 733603 ACTTTTTTTAACAAA TAAAAAAATAAGACCCTC TCA AAGGGTCTTTTTATTTTA GTTCTAAATAACGTT TERM 1028 733592 - 733630 + T 72 -9.1 -2.6176 | opp_overlap 733592 733600 733603, overlap 733603 ACTTTTTTTAACAAA TAAAAAAATAAGACCCT CTCAA AGGGTCTTTTTATTTTA GTTCTAAATAACGTT TERM 1029 733622 - 733600 - T 100 -7 -6.08342 | opp_overlap 733592 733603, overlap 733592 733603 TAACAAATAAAAAAA TAAGACCCTC TCA AAGGGTCTTT TTATTTTAGTTCTAA TERM 1030 733603 - 733619 + T 100 -8 -5.54338 | opp_overlap 733600 733592 733603, overlap 733592 CAAATAAAAAAATAA GACCCT CTCAA AGGGTC TTTTTATTTTAGTTC TERM 1031 733619 - 733603 - T 100 -8.7 -5.01858 | opp_overlap 733603 733592, overlap 733600 733592 CAAATAAAAAAATAA GACCCTC TCA AAGGGTC TTTTTATTTTAGTTC PAa_0717 734030 - 733623 - | Hsp20-family chaperone TERM 1032 734468 - 734490 + r 75 -6.4 -4.55295 | opp_overlap 734463 734460, overlap 734468 734469 TATGACATTATTTGC TCCAAAAAAA GGT TTTTTTGGGA TTTGTTTATGGAAAA TERM 1033 734774 - 734786 + r 72 -4.9 -5.00388 | opp_overlap 734760 734774 ATTTAAAATAAAAAT TGTTT TAA AAACA TTTGTTTTTCGTTTG oppF 735783 - 735322 - | ABC-type dipeptide/oligopeptide transport system, ATPase component TERM 1034 735832 - 735844 + r 73 -2.7 -5.79595 | AATCTGGGGAGATGA TGTTT TTT AGACA TTTTTTGTTTTAAAA TERM 1035 736402 - 736429 + r 71 -5.8 -4.69559 | GCTTTGTGGGACATG CTGATTAAAAAG CCTT TTTTTTAATTAG TTTATTTTGCACTTT TERM 1036 737464 - 737487 + r 76 -2.5 -5.85011 | gap 2, overlap 737467 AAGGTTTATGCTTTA TCT--GAGCCC TTGA GGGCTCTTAGA TTTTTTTCATTTTTG TERM 1037 737467 - 737482 + r 91 -10.4 -3.5915 | overlap 737464 GTTTATGCTTTATCT GAGCCC TTGA GGGCTC TTAGATTTTTTTCAT PAa_0721 738355 - 737750 - | hypothetical protein TERM 1038 738181 - 738208 + g 78 -8.4 -3.81926 | gap 1, overlap 738178 GAATTTGATTTTTGG GGCGGTAGTTCGC TTC GCGA-TAACCGCC TTCGTTTTTAGAGTG PAa_0722 739296 - 738721 - | Putative methylase TERM 1039 739360 - 739382 + H 91 -7 -5.60993 | TTAAAAATTCTTTAA GACTGACTTA TTT TTAGTCGGTC TTTTTTTGTACCCAA fliA 739459 - 740133 + | DNA-directed RNA polymerase specialized sigma subunit PAa_0724 740133 - 740444 + | Single-strand DNA-binding protein of phage TERM 1040 740527 - 740544 + F 73 -6.9 -4.32857 | opp_overlap 740527 ATCAAAATTTCACAA GGTCCGT GCTA GCGGGCC TTTCTCTTTAACGAA TERM 1041 741042 - 740997 - f 89 -8.7 -4.71828 | gap 1, opp_overlap 741005 ATTTTATTAATAAAA TTGTATAATGGTGATAAGTGAT ATG ATTAATTATCACCATTAT-CAA GAAAGGTAAATAAAT TERM 1042 741005 - 741035 + F 80 -9.2 -3.28924 | opp_overlap 740997 AATAAAATTGTATAA TGGTGATAAGTGAT ATG ATTAATTATCACCA TTATCAAGAAAGGTA TERM 1043 741627 - 741615 - f 79 -4.9 -5.52347 | AATAAAATCAAAAAA TTTCA AGA TGAAA AACAAAAAATAATTG TERM 1044 742104 - 742086 - g 83 -7.6 -4.63542 | opp_overlap 742085 742095 742097, overlap 742094 742095 GATAATTTGGAAAAA CAAAAAAA CTA TTTTTTTG AATTATTTATCAAAA TERM 1045 742125 - 742094 - g 95 -4 -6.20267 | opp_overlap 742085 742095 742097 742123, overlap 742086 742095 742123 GGAAAAACAAAAAAA CTATTTTTTTGA ATTATTTA TCAAAAAAATAA TTATAAAATTAATGT TERM 1046 742136 - 742123 - g 71 -2.5 -5.53991 | opp_overlap 742095 742123, overlap 742095 742094 TATTTATCAAAAAAA TAATT ATAA AATTA ATGTTTATAGAAATT PAa_0726 741861 - 742166 + | hypothetical protein TERM 1047 743786 - 743807 + F 75 -3.7 -5.60993 | TTTTAATCTAATTTA GACCCTT TTTTTACT AGGGGTC TTTTTTTATACCCAA TERM 1048 744702 - 744668 - g 70 -8.7 -2.6704 | overlap 744665 744664 CAAACGGCAAACTTA CACCATTGAAGATTT ATTGA AACTCTCCAATGGCG CCAAAAACATCTATC PAa_0728 743892 - 745298 + | hypothetical protein TERM 1049 745305 - 745322 + F 100 -9.9 -6.20267 | opp_overlap 745305 ATTAATTGATATTAA GACCTTC TAAT GAAGGTC TTTTTTTATTTTTGC TERM 1050 745322 - 745305 - f 87 -9.9 -3.30006 | opp_overlap 745305 ATTAATTGATATTAA GACCTTC TAAT GAAGGTC TTTTTTTATTTTTGC TERM 1051 745700 - 745680 - f 83 -11.2 -2.58812 | opp_overlap 745680 TTTAAACCTAATTTA TACCCCCT AAACA AGGGGGTA TTTTTTTCACTTTTT TERM 1052 745680 - 745700 + F 100 -11.2 -5.63857 | opp_overlap 745680 TTTAAACCTAATTTA TACCCCCT AAACA AGGGGGTA TTTTTTTCACTTTTT TERM 1053 745981 - 745940 - g 100 -12.5 -4.19735 | opp_overlap 745942, overlap 745942 745955 GTGGGTAAAACTAAA CACCAATTCAAAAAAGCCC TCCA AGGCTGTTTTGAATTGGTT TGTGATGAGTAATGA TERM 1054 745942 - 745979 + G 100 -14.4 -3.98214 | opp_overlap 745940 745942 745955 GGGTAAAACTAAACA CCAATTCAAAAAAGCC CTCCAA GGCTGTTTTGAATTGG TTTGTGATGAGTAAT TERM 1055 745979 - 745942 - g 100 -15.1 -3.695 | opp_overlap 745942, overlap 745940 745955 GGGTAAAACTAAACA CCAATTCAAAAAAGCCC TCCA AGGCTGTTTTGAATTGG TTTGTGATGAGTAAT PAa_0729 745782 - 746000 + | hypothetical protein PAa_0730 746280 - 746486 + | Putative phage associated protein PAa_0731 746750 - 747103 + | hypothetical protein TERM 1056 747380 - 747358 - f 100 -16.3 -3.43965 | opp_overlap 747358 AAACCTAATTTATAA CCCCCCCTC AACTA GAGGGGGGG TTTTTTTTATTTCTT TERM 1057 747358 - 747380 + F 100 -16.3 -6.32017 | opp_overlap 747358 AAACCTAATTTATAA CCCCCCCTC AACTA GAGGGGGGG TTTTTTTTATTTCTT TERM 1058 747605 - 747641 + F 100 -10.5 -5.71712 | opp_overlap 747597 747605 747633 AGAACAACAAATTTA TCCAAATTGTTTATT AATTAAA AATAAACAGTTTGGA TTTTTTTGTATCCAA TERM 1059 747660 - 747633 - f 91 -8.6 -4.96773 | opp_overlap 747605, overlap 747605 747597 TTAATTAAAAATAAA CAGTTTGGAT TTTTTTGT ATCCAAACTG AGAAAAAGGAGTTTG PAa_0732 747680 - 748963 + | Replicative DNA helicase, prophage tmk 749608 - 750255 + | Thymidylate kinase PAa_0736 750275 - 750451 + | hypothetical protein huP 750882 - 751199 + | DNA-binding protein HU TERM 1060 751759 - 751772 + G 70 -5.3 -4.53777 | opp_overlap 751759 751757 TAGTCTTCCCAAAGA CGTTT TTGA AAACG TTGTTTTTCATTCAG PAa_0739 751223 - 751900 + | Putative N6 adenine-specific DNA methyltransferase TERM 1061 752205 - 752191 - g 91 -7.2 -5.21459 | AAAAACAAAAAGAAA TCGTTT AAA AAACGA AGAAAAGTTATTAAA PAa_0740 752041 - 752229 + | hypothetical protein PAa_0741 752245 - 752685 + | hypothetical protein TERM 1062 752748 - 752766 + G 77 -6.2 -4.72029 | CTTTAATGTTTATCA TTAAAAAA ATC TTTTTTAA TTTTGTTCCATTGCC PAa_0742 752678 - 752914 + | hypothetical protein TERM 1063 753899 - 753881 - T 73 -6.8 -4.29621 | overlap 753884 753897 GATAAACAAATTAAA CAACTTCA AAA TGAAATTG AAGCAATCAAAAACC TERM 1064 755530 - 755500 - T 78 -8.6 -3.96449 | CAACACCCCAAATAA TTCAAAATTTAAAT ACC ATTTCAATTTTGAA TAACAACAAACATAT TERM 1065 757558 - 757540 - T 100 -7.5 -5.31545 | AACAACATGAAAAAA CTTTGGA AGAAA TCCAAAG ACAAATTACAAATTA PAa_0748 759173 - 758967 - | hypothetical protein TERM 1066 759157 - 759195 + g 70 -7.7 -3.4178 | gap 1, overlap 759162 GTAGTTAAAACATGG TTTGGTC-GGTAATGCAA TTTT TTGCATTACCAGATTAGA TTATGATACAATGAT TERM 1067 759162 - 759190 + g 83 -9.8 -3.25072 | gap 1, overlap 759157 TAAAACATGGTTTGG TC-GGTAATGCAA TTTT TTGCATTACCAGA TTAGATTATGATACA TERM 1068 760023 - 760007 - g 70 -5.1 -4.72272 | GCCGTTTATGAAAAA CCCTTTT GAC AAATGGG AAGTAAAAGATAACA PAa_0749 759249 - 760328 + | hypothetical protein TERM 1069 761598 - 761616 + F 74 -8.1 -3.34364 | opp_overlap 761598, overlap 761597 TAATTAAAACTATAA GCCCTTC ATAAC GGAGGGC ATTTTGTGTAGGTTT TERM 1070 761676 - 761653 - f 73 -2.4 -5.79526 | AGACCTCAAAAAAAA GGTGTTTTAA AAAA CCATAACACC CCTTAAAACTCAATA TERM 1071 761835 - 761857 + F 73 -5.8 -4.87626 | overlap 761837 ATTTTTAGATTATTA TGTAAAAAAA TTA TTTTTTTATA TTTTTAGTATTGACA TERM 1072 761963 - 761909 - f 100 -17.8 -3.66139 | opp_overlap 761911 761917 761921 761925, overlap 761911 761917 761921 761925 CATATATATGGTAAA TATATAAAGAAAGAAATAAAAACTTT TGA ACAGTTTTTATTTCTTTCTTTATATT ACATATACATATATT TERM 1073 761911 - 761961 + F 100 -20.4 -3.14026 | opp_overlap 761911 761909 761917 761921 761925, overlap 761917 761921 761925 TATATATGGTAAATA TATAAAGAAAGAAATAAAAACTTT TGA ACAGTTTTTATTTCTTTCTTTATA TTACATATACATATA TERM 1074 761961 - 761911 - f 100 -20.4 -3.40558 | opp_overlap 761911 761917 761921 761925, overlap 761909 761917 761921 761925 TATATATGGTAAATA TATAAAGAAAGAAATAAAAACTTT TGA ACAGTTTTTATTTCTTTCTTTATA TTACATATACATATA TERM 1075 761955 - 761917 - f 100 -15 -4.27886 | opp_overlap 761911 761917 761921 761925, overlap 761911 761909 761921 761925 TGGTAAATATATAAA GAAAGAAATAAAAACTTT TGA ACAGTTTTTATTTCTTTC TTTATATTACATATA TERM 1076 761917 - 761955 + F 100 -15 -4.22678 | opp_overlap 761917 761911 761909 761921 761925, overlap 761911 761921 761925 TGGTAAATATATAAA GAAAGAAATAAAAACTTT TGA ACAGTTTTTATTTCTTTC TTTATATTACATATA TERM 1077 761951 - 761921 - f 100 -10 -4.69487 | opp_overlap 761921 761917 761911 761925, overlap 761917 761911 761909 761925 AAATATATAAAGAAA GAAATAAAAACTTT TGA ACAGTTTTTATTTC TTTCTTTATATTACA TERM 1078 761921 - 761951 + F 100 -10 -4.68511 | opp_overlap 761917 761911 761909 761921 761925, overlap 761917 761911 761925 AAATATATAAAGAAA GAAATAAAAACTTT TGA ACAGTTTTTATTTC TTTCTTTATATTACA TERM 1079 761925 - 761947 + F 70 -5 -4.84602 | opp_overlap 761921 761917 761911 761909 761925, overlap 761921 761917 761911 ATATAAAGAAAGAAA TAAAAACTTT TGA ACAGTTTTTA TTTCTTTCTTTATAT TERM 1080 761947 - 761925 - f 70 -5 -4.84602 | opp_overlap 761925 761921 761917 761911, overlap 761921 761917 761911 761909 ATATAAAGAAAGAAA TAAAAACTTT TGA ACAGTTTTTA TTTCTTTCTTTATAT TERM 1081 762056 - 762042 - f 72 -5 -5.00616 | TTTTTCTTCAAAAAA CCAATT AAA AACTGG TACTGGTTGAGAACA TERM 1082 762624 - 762614 - g 76 -4 -5.4833 | TTATTTAATAAAAAA CTTT CAT AAAG AAATTGAATATAAAA TERM 1083 764342 - 764330 - g 74 -2.7 -5.6473 | ACAATATCAAAAAAA GATTC ATG AAATC AAAGAATTACAACAA TERM 1084 764607 - 764595 - g 72 -6.3 -4.30977 | AACAAAGAAACGAAA GCAAT TTT ATTGC AACAAGATAAATTGA TERM 1085 764996 - 764984 - g 90 -3.5 -6.09888 | opp_overlap 764984 TTTGAATAAAAAAAA TATTT TTA AAATA TTTTACCAAAAAAAA PAa_0752 762246 - 765239 + | hypothetical protein TERM 1086 765224 - 765214 - f 72 -4 -5.33921 | AAATTAAGCAAAAAA TTCA ATT TGAA AAAAGTATTTCTTAA TERM 1087 766227 - 766212 - g 73 -3.2 -5.48514 | opp_overlap 766212, overlap 766214 AGCAACAAAGAAAAA CGTTGC TTAC GCAAAG ATTTGCAAATTATTT PAa_0753 765927 - 766904 + | ABC-type peptide/nickel transport system ATP-binding protein TERM 1088 766896 - 766886 - f 71 -5.4 -4.63089 | CAGTTTAAAAAATAA TTCC AAA GGAA AGGCTTAAAGATGAA PAa_0754 766907 - 767695 + | ABC-type peptide/nickel transport system ATP-binding protein TERM 1089 768299 - 768256 - f 79 -8.5 -4.13767 | gap 1, opp_overlap 768256, overlap 768259 TTTTTTATTTTAAAA CAAGTAAAACGCT-CAAAAA TATTT TTTTAATAGCGTTTTACTTG TTTTTTTTTTTTTTT TERM 1090 768256 - 768299 + F 100 -6.9 -7.14698 | opp_overlap 768256 768259 TTTTTTATTTTAAAA CAAGTAAAACGCTCAAAAA TATTTT TTTAATAGCGTTTTACTTG TTTTTTTTTTTTTTT PAa_0755 768393 - 769952 + | ABC-type peptide/nickel transport system substrate-binding protein TERM 1091 770089 - 770103 + F 91 -5 -6.02546 | ATAAAATGAACTGTT GCTTTT TTG AAAGGC TTTTTTTTGATTTAA TERM 1092 770291 - 770274 - g 75 -5.7 -4.81644 | GAAAGAAAATTAAAA TGAATTT AGCT AAATTCA AGGCTTTTTGTTCTA TERM 1093 771800 - 771828 + G 71 -8.3 -3.16093 | opp_overlap 771798, overlap 771798 771798 ACTTCCAAACACATT GAAAAAGGATTTG AAA CAGATGCTTTTTC TAATTTTGAATTTAC PAa_0756 770273 - 771865 + | ABC-type peptide/nickel transport system substrate-binding protein PAa_0757 772078 - 773010 + | ABC-type peptide/nickel transport system permease protein PAa_0758 773043 - 773903 + | ABC-type peptide/nickel transport system permease protein TERM 1094 773920 - 773944 + F 100 -8 -6.02345 | opp_overlap 773920 773911 TGAAAACAAACATAA CTGTTTATTG TTGAC CGATAAACAG TTTTTTTTATAGTTC TERM 1095 774030 - 774040 + F 87 -4 -6.20267 | ATTTGTTATTTTTGA GTTT AGA AAAC TTTTTTTATTTTTAA TERM 1096 774067 - 774090 + F 87 -6 -5.67063 | TTAAGAAAAATTTGG GACTGACTTA TTTT TTAGTCGGTC TTTTTTTGTACTCAA PAa_0759 774153 - 774314 + | hypothetical protein groES 774690 - 775016 + | Chaperonin GroES (Hsp10) TERM 1097 775247 - 775230 - g 74 -4.1 -5.29385 | AATTGAATTAAAAAA CCCTTAT CAAA ATATGGG CGCTAAATTAGTTTA TERM 1098 775912 - 775931 + G 72 -5 -4.99043 | opp_overlap 775911, overlap 775914 775922 ACCTTACAAGATATT GCTGCTTT AACT AAAGCAAC TTTTGTTTCTAAAGA TERM 1099 776239 - 776212 - g 80 -4.2 -5.56264 | TTGAAAGATAAAAAA TTACGTTTAGAA GACG CTCTTAACGCAA CCAAAGCGGCTGTGA groL 775042 - 776652 + | Chaperonin GroEL (Hsp60) PAa_0762 776972 - 777418 + | Immunodominant membrane protein precursor, fragment TERM 1100 777462 - 777480 + F 100 -8.2 -5.66338 | opp_overlap 777462, overlap 777446 TTTTTCTATGAAAAA GCTAGGTT TTT AATCTAGC TTTTTTCTTATCTTT TERM 1101 777480 - 777462 - f 74 -6 -4.72272 | opp_overlap 777446 777462 TTTTTCTATGAAAAA GCTAGGTT TTT AATCTAGC TTTTTTCTTATCTTT TERM 1102 778006 - 777996 - g 71 -4 -5.02323 | TCAGTATAAATAAAA TTCT TCA AGAA AGCAAAGCTCTTTTT TERM 1103 778241 - 778221 - g 75 -5.5 -4.98672 | TCCAAAAAGATAAAA TTTTGGGTA TAA TACCTAAAA AAACCATCCCTAATT TERM 1104 778445 - 778463 + G 75 -5.4 -4.97461 | overlap 778460 AGTGATTTAATGGCT TTAAATGG CGC TCATTTAA TTTTTAATCTTTCTT TERM 1105 778953 - 778937 - g 70 -6.7 -3.89212 | GATTTAGATACCAAA GTTATTT TAG AAATAAC CGAAAACATAAATGA nadE 777905 - 779671 + | NAD(+) synthetase TERM 1106 780041 - 780022 - f 71 -6.6 -4.16943 | TGCTATATTTCAAAA TTTTTTGA AAAA TCAAAAAA ATACAAACACATTTT TERM 1107 780266 - 780239 - f 86 -9.4 -3.96148 | opp_overlap 780233 780232 CTTCCTTATCATAAA GTTAAGAAATAA TTTT TTATTCCTTAAC TTGAGGGTTGTTTTT TERM 1108 780384 - 780404 + F 93 -11.3 -3.32963 | AAGTGCTGTTTCTTT CTTGCTTTT AAA AAAAGCAAG TTATGAAGTAGAAGT TERM 1109 781582 - 781606 + G 70 -2.9 -5.1925 | overlap 781597 TACCAGCTCAAAAAG GTTCTATTAAA AGA TTGGATGGAAC TTTTTTGACTTATCA trmU 780909 - 782036 + | tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase TERM 1110 783454 - 783434 - g 72 -6.3 -4.3586 | opp_overlap 783438 TTATCGATATCAAAA CTAATAAAA ATA TTTTATCAG TTAACAAAGACTGGT TERM 1111 783538 - 783526 - g 75 -3.4 -5.40072 | overlap 783511 TCTTTTTTAAAAAAA CTTC AAAAA GAAG AAGATTTATTAGCGA relA 782074 - 784251 + | GTP pyrophosphokinase TERM 1112 784784 - 784774 - T 70 -4 -5.25805 | opp_overlap 784774 784768 AATAAAGTGAAAAAA TTGT TTA ACAA TTTTTAATATTTTGT TERM 1113 784815 - 784794 - T 74 -8.9 -3.07947 | TAACAATTTTTAATA TTTTGTTCA TTTT TGAACAAAA TGAAAAACCAAAAAA TERM 1114 784858 - 784848 - T 76 -2.6 -5.95539 | CGTTAAACAAAAAAA TATT ATT AATA AAAAACTCTACTTTT TERM 1115 785303 - 785284 - T 100 -8.6 -6.4275 | opp_overlap 785286 CAAAAATAAAAAAAA GACCGACT AAAA AGTCGATC TTACAGAATTTTTAA citS 786809 - 785343 - | Putative malate/citrate symporter TERM 1116 785998 - 786011 + g 71 -3.9 -5.1861 | TTGCCACTTAATTTG CTTTT TTGA AAAAG TTTTTTAATAATACC sfcA 787978 - 786806 - | Malate dehydrogenase TERM 1117 787591 - 787611 + g 71 -2.5 -5.42862 | opp_overlap 787587 787591 TGTCTTCTAAATTGA TTGCACC AAAAACA GGAGCAA TTTTTTTCACAATGT TERM 1118 788314 - 788294 - H 71 -7.1 -3.90315 | AGAAAAGATTAAGAA TTTTTTTAA GTT TTAAAAAAA GGATGGATGTCTAAT TERM 1119 788501 - 788511 + H 79 -4 -5.79595 | opp_overlap 788494 788501, overlap 788494 ACAAAATATTAAAAA TTGT TAA ACAA TTTTTTATTTTGAAA TERM 1120 789294 - 789284 - g 91 -2.6 -6.35605 | overlap 789289 TAATAGAAAAAAAAA TAAA AGA TTTA ACAAACCAACTTAAT TERM 1121 789301 - 789289 - g 78 -2.7 -5.7506 | overlap 789284 GAAAAAAAAATAAAA GATTT AAC AAACC AACTTAATGAAGCTA TERM 1122 790539 - 790527 - g 71 -4.1 -5.1356 | overlap 790528 CTGTATTAACAAAAA CTGCT TGG AGCAA AAAATTCAAAAATTA TERM 1123 791118 - 791104 - g 90 -3.6 -5.96894 | overlap 791105 AGCCAAATAAAAAAA CTTTTG ATT CAAAAA GGAGCCATTATTAAT TERM 1124 791139 - 791119 - g 77 -6.1 -4.65895 | opp_overlap 791119 CTTTTGATTCAAAAA GGAGCCATT ATT AATGACGCC CTTTCTTCACAAACA ligA 789253 - 791265 + | NAD-dependent DNA ligase PAa_0771 791292 - 792251 + | Conserved hypothetical protein DUF199 TERM 1125 792629 - 792651 + F 100 -9.3 -5.76633 | TTGCATGTTTTTTTA TACCAAACA TCTCC TGTTTGGTA TTTTTTTATGTCTAA TERM 1126 792739 - 792761 + F 100 -7 -6.32976 | TTTAAAAAATTTTGG GACTGACTTA TTT TTAGTCGGTC TTTTTTTCTTTTTTT TERM 1127 792955 - 792934 - f 74 -6.1 -4.56597 | opp_overlap 792933 TTTTGTTTTGAAAAA TATTTTTTA AAGA TAAAAAATA AATAATTTTATTTTT TERM 1128 792979 - 792958 - f 70 -3.9 -5.19003 | AAGATAAAAAATAAA TAATTTTAT TTTT ATAAAACTA ACGAAATTAATTAAA TERM 1129 793393 - 793383 - g 76 -4 -5.40072 | overlap 793385 CTTGCCTCAAAAAAA CATT GCA AATG GTAGATTGCAAACAA PAa_0772 793369 - 793836 + | hypothetical protein PAa_0773 793934 - 794257 + | hypothetical protein PAa_0774 794660 - 794403 - | hypothetical protein TERM 1130 795226 - 795212 - R 100 -8.6 -5.76633 | opp_overlap 795212 TGAGATATAAAAAAA GTCCTT TTA AAGGAC TTAAATTACTTAAGG TERM 1131 795212 - 795226 + r 72 -8.6 -3.23899 | opp_overlap 795212 TGAGATATAAAAAAA GTCCTT TTA AAGGAC TTAAATTACTTAAGG TERM 1132 795246 - 795270 + r 82 -10.3 -2.87553 | opp_overlap 795244 795246, overlap 795244 795243 795245 795262 795265 ATTACTTAAGGAAGA TTTTTCTAAAA TCA TTTTAGAAAAA ATTTCGAATTTTTCA TERM 1133 795270 - 795246 - R 87 -10.3 -3.25919 | opp_overlap 795244 795243 795246 795245 795262 795265, overlap 795244 ATTACTTAAGGAAGA TTTTTCTAAAA TCA TTTTAGAAAAA ATTTCGAATTTTTCA glnQ 796231 - 795500 - | ABC-type amino acid transport system,ATPase component TERM 1134 795669 - 795679 + g 71 -2.6 -5.51165 | AAAGTTATTTTTTTA TTAT CAG ATAA TTTTTTTAAAATTTT TERM 1135 796524 - 796534 + G 74 -2.6 -5.63504 | AATCAATAGGATTTT TTTA TAT TAAA TTTTTTTATAAAATT mutT 796496 - 797053 + | NUDIX hydrolase TERM 1136 797209 - 797230 + T 73 -2.9 -5.72616 | opp_overlap 797209 TTAAAAATTATTTAA GACTGACTT ATTT AAGCCTGTC TTTTTTTCTATCGCT rsrIR 798045 - 797317 - | Putative restriction endonuclease PAa_0778 798676 - 798047 - | Putative N6 adenine-specific DNA methyltransferase, probably truncated TERM 1137 798140 - 798127 - G 70 -5.3 -4.53777 | opp_overlap 798127 798125 CTGAATGAAAAACAA CGTTT TCAA AAACG TCTTTGGGAAGACTA TERM 1138 798570 - 798556 - G 78 -7.2 -4.58395 | opp_overlap 798556 CGCAGGGGTCAAAAA TCAAAC CAC GTTTGA TTTGAGGTGATAAAA TERM 1139 798634 - 798653 + g 72 -6.6 -4.15029 | TATAAATAGTAGATT TTTTTTCA TTTT TGAAAAAA TTATTTCTATCAACT TERM 1140 798851 - 798863 + r 70 -6.3 -4.29302 | opp_overlap 798851, overlap 798848 GATAATTAATTACAA CCTTT TAA AAAGG TTCTTTTGCTGTACA TERM 1141 799121 - 799103 - R 73 -3.1 -5.46698 | TTTAAAAGCAAAAAA GAGACCC GTAAA AAGTCTC TTTTTTTATATTAAT mgtA 801887 - 799146 - | Cation transport ATPase TERM 1142 800906 - 800920 + g 73 -2.9 -5.47218 | opp_overlap 800917 TAGTAGAACTTAATG TTTCT AAAGA AGAAA TTTTTTTCACTAAAG TERM 1143 801676 - 801666 - G 83 -6.8 -4.88222 | ATTAAAAGCTAAAAA GGCT GCA AGCC ATAATAAACAAGCCA TERM 1144 802176 - 802159 - R 86 -5.5 -5.75342 | opp_overlap 802168 TCTTTTCAAAAAAAA GGCCCCT AACA AGAAGCC TTGATTATTTTTTTT engA 803500 - 802181 - | GTP-binding protein TERM 1145 802246 - 802260 + g 71 -7.2 -3.72695 | opp_overlap 802245 GTTTTTGACGAAATT GGTTTT TTA AAAACC TTTCATAAGAAAAAT TERM 1146 802555 - 802567 + g 77 -4.9 -5.2112 | overlap 802539 TAAATTCTTGGCGAA TTTGA TCT TCAAA TTTTTTCATAGTATT cmk 804162 - 803488 - | Cytidylate kinase TERM 1147 804207 - 804219 + r 70 -3.5 -5.40004 | TTTAGTTTTTATTAG TTAAA ATT TTTAA TTTTTTGATTTCGTG rsuA 804924 - 804193 - | 16S rRNA pseudouridylate synthase truB 805837 - 804983 - | tRNA pseudouridine synthase B trxA 806187 - 805864 - | Thioredoxin TERM 1148 806246 - 806225 - R 72 -7.5 -3.49851 | opp_overlap 806225, overlap 806221 806244 TAAGACTACAATTAA TTATAACTT AAAA AAGTTATAA TTGGATTAAATAAAC PAa_0785 806546 - 806241 - | hypothetical protein, probable fragment TERM 1149 806463 - 806481 + g 70 -6.1 -4.10007 | CATTTTAAGGTTTGC CACTTTT TGGTC AAAAGTG TTTTGCGACAATTGT TERM 1150 806932 - 806913 - R 88 -4.9 -5.96219 | opp_overlap 806913, overlap 806915 TAGGTATAAAAAAAA GACCCCT AGTTAA AGGGGAC TAAATTAGATTAAAA TERM 1151 806930 - 806915 - R 74 -6.1 -4.62054 | opp_overlap 806913, overlap 806913 GGTATAAAAAAAAGA CCCCT AGTTAA AGGGG ACTAAATTAGATTAA TERM 1152 807308 - 807291 - R 100 -9.9 -6.28401 | opp_overlap 807291 GAAAAAATAAAAAAA GACCTTC ATTA GAAGGTC TTAATATCAATTAAT TERM 1153 807291 - 807308 + r 87 -9.9 -3.30006 | opp_overlap 807291 GAAAAAATAAAAAAA GACCTTC ATTA GAAGGTC TTAATATCAATTAAT TERM 1154 808728 - 808740 + r 80 -2.7 -6.09196 | GGTTTGGGGAGATGA TGTTT TTT AGACA TTTTTTTGTTTTAAA TERM 1155 808777 - 808741 - R 73 -9.1 -2.87344 | opp_overlap 808743, overlap 808758 GATGTTTTTTAGACA TTTTTTTGTTTTAAAAA TAT TCTTTAAAACTAAAAAA TAATAGATAATTTCA TERM 1156 809053 - 809029 - R 93 -12.3 -3.15638 | opp_overlap 809028 809027, overlap 809033 AAAATGTACAGTGAA GCAACCTCTTT TTA AAAAAGGTTGC AGTTGATTTTATCAT TERM 1157 809325 - 809337 + r 80 -2.7 -6.09196 | GGCCTGGGGAGATGA TGTTT TTT AGACA TTTTTTTGTTTTAAA TERM 1158 809374 - 809338 - R 73 -9.1 -2.87344 | opp_overlap 809340, overlap 809355 GATGTTTTTTAGACA TTTTTTTGTTTTAAAAA TAT TCTTTAAAACTAAAAAA TAATAGATAATTTCA TERM 1159 809649 - 809625 - R 85 -10.1 -3.15638 | opp_overlap 809624, overlap 809629 AAAATGTACAGTGAA GCAACCTCTCT TTA AAAAAGGTTGC AGTTGATTTTATCAT PAa_0788 810620 - 809676 - | Putative phage integrase TERM 1160 809896 - 809921 + g 72 -4.9 -4.84219 | GCTTTGCTGGACATG CTGATTAAAAG GCCT TTTTTAATTAG TTTATTTTGTACTTT PAa_0789 811845 - 810751 - | Putative methyltransferase TERM 1161 811349 - 811367 + g 71 -3.9 -5.07652 | CCAAATGGAGGGTTT CCGAAAA CGATA TTTTTGG TTTTCTTTTCAGGAA TERM 1162 811422 - 811448 + g 83 -6.7 -4.93877 | gap 1, opp_overlap 811440, overlap 811424 TGTAATTTTTGTTAA T-GTTGGGGTTG AAAT CAACCCCAATTA TTTTATTTGGTGGAA TERM 1163 811424 - 811445 + g 100 -13.1 -4.56436 | opp_overlap 811440, overlap 811422 TAATTTTTGTTAATG TTGGGGTTG AAAT CAACCCCAA TTATTTTATTTGGTG TERM 1164 812079 - 812094 + H 91 -10.4 -3.4968 | overlap 812054 812076 GTTTATGCTTTATCT GAGCCC TTGA GGGCTC TTAGATTTTTCTCAT TERM 1165 812436 - 812457 + H 88 -6.6 -5.60993 | TTAAAAATTCTTTAA GACTGACT TATTTT AGTCGGTC TTTTTTTGTACCCAA TERM 1166 812839 - 812825 - g 71 -4.2 -5.15634 | GACCTCATTAAAAAA TGCCAC CAA GCAGCA ATGCCTCGGCAAAAC fliA 812534 - 813205 + | DNA-directed RNA polymerase specialized sigma subunit PAa_0791 813209 - 813520 + | Single-strand DNA-binding protein of phage TERM 1167 813603 - 813620 + F 95 -10.5 -4.32857 | opp_overlap 813603 ATCAAAATTTCACAA GGTCCGC GCTA GCGGGCC TTTCTCTTTAACAAA TERM 1168 813620 - 813603 - f 74 -8.3 -3.42768 | opp_overlap 813603 ATCAAAATTTCACAA GGTCCGC GCTA GCGGGCC TTTCTCTTTAACAAA PAa_0792 813755 - 814552 + | hypothetical protein TERM 1169 814577 - 814547 - f 100 -12.1 -5.46706 | gap 1, opp_overlap 814553, overlap 814553 ATGGGAAAAGAAAAA GAATAAGACCGCTA TTTT TAGCGGTCTT-TTC TTGTAAAACCCCATT TERM 1170 814572 - 814553 - f 100 -12.2 -4.42156 | opp_overlap 814553, overlap 814547 AAAGAAAAAGAATAA GACCGCTA TTTT TAGCGGTC TTTTCTTGTAAAACC TERM 1171 814553 - 814572 + F 100 -12.2 -4.77165 | opp_overlap 814553 814547 AAAGAAAAAGAATAA GACCGCTA TTTT TAGCGGTC TTTTCTTGTAAAACC PAa_0793 814921 - 815202 + | hypothetical protein TERM 1172 815288 - 815278 - f 73 -5.4 -4.79053 | overlap 815283 AAATACCAAAAGAAA GGAA ATG TTCC AAATGAAACAAACGA TERM 1173 815753 - 815729 - g 71 -8.1 -3.28261 | ACAATTTCAGATGAA GATTTAAAAAA CTT TTTTTCAAATC ATAAACTTTTAGAAA gepA 815282 - 815839 + | Uncharacterized phage-associated protein TERM 1174 816291 - 816341 + T 100 -20.4 -3.05819 | opp_overlap 816291 816297 816301 816305, overlap 816293 816297 816301 816305 816338 TATATGTATATGTAA TATAAAGAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTCTTTATA TATTAACCATATATA TERM 1175 816341 - 816291 - T 100 -20.4 -3.14026 | opp_overlap 816291 816293 816297 816301 816305 816338, overlap 816297 816301 816305 TATATGTATATGTAA TATAAAGAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTCTTTATA TATTAACCATATATA TERM 1176 816293 - 816339 + T 100 -18.6 -3.08371 | opp_overlap 816291 816297 816301 816305, overlap 816291 816297 816301 816305 816338 TATGTATATGTAATA TAAAGAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTCTTTA TATATTAACCATATA TERM 1177 816335 - 816297 - T 100 -15 -4.22678 | opp_overlap 816293 816291 816297 816301 816305, overlap 816291 816301 816305 TATATGTAATATAAA GAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTC TTTATATATTAACCA TERM 1178 816297 - 816335 + T 100 -15 -4.2074 | opp_overlap 816297 816291 816301 816305, overlap 816293 816291 816301 816305 TATATGTAATATAAA GAAAGAAATAAAAACTTT TGA ATAGTTTTTATTTCTTTC TTTATATATTAACCA TERM 1179 816331 - 816301 - T 100 -10 -4.68511 | opp_overlap 816297 816293 816291 816301 816305, overlap 816297 816291 816305 TGTAATATAAAGAAA GAAATAAAAACTTT TGA ATAGTTTTTATTTC TTTCTTTATATATTA TERM 1180 816301 - 816331 + T 100 -10 -4.68132 | opp_overlap 816301 816297 816291 816305, overlap 816297 816293 816291 816305 TGTAATATAAAGAAA GAAATAAAAACTTT TGA ATAGTTTTTATTTC TTTCTTTATATATTA TERM 1181 816327 - 816305 - T 70 -5 -4.84602 | opp_overlap 816301 816297 816293 816291 816305, overlap 816301 816297 816291 ATATAAAGAAAGAAA TAAAAACTTT TGA ATAGTTTTTA TTTCTTTCTTTATAT TERM 1182 816305 - 816327 + T 70 -5 -4.84602 | opp_overlap 816305 816301 816297 816291, overlap 816301 816297 816293 816291 ATATAAAGAAAGAAA TAAAAACTTT TGA ATAGTTTTTA TTTCTTTCTTTATAT TERM 1183 816657 - 816637 - T 83 -7.5 -4.59984 | opp_overlap 816632 816638, overlap 816638 AAAACCTACACAAAA TGCCCTCCA TGA TGAAGGGCT TATAGTTTTAATTAT TERM 1184 816638 - 816656 + T 79 -8.8 -3.72152 | opp_overlap 816637 816638, overlap 816632 AAACCTACACAAAAT GCCCTCCA TGA TGAAGGGC TTATAGTTTTAATTA TERM 1185 816656 - 816638 - T 93 -11 -3.34364 | opp_overlap 816638 816632, overlap 816637 AAACCTACACAAAAT GCCCTCCA TGA TGAAGGGC TTATAGTTTTAATTA PAa_0796 817844 - 816672 - | Putative phage integrase TERM 1186 817854 - 817864 + r 70 -4 -5.20328 | GCTCATTTCTGTTTT GTTA ACA TAAC TTTATTTTTTTAAGC TERM 1187 817925 - 817958 + r 95 -10.7 -4.20042 | gap 1, opp_overlap 817925, overlap 817928 817931 GTTTTATAAAAAAAA CAACAATAAAA-CTTT TTA AAAGATTTTATTGTTG TTTTAAAATATTAAT TERM 1188 817958 - 817925 - R 100 -10.7 -5.93809 | gap 1, opp_overlap 817925 817928 817931 GTTTTATAAAAAAAA CAACAATAAAA-CTTT TTA AAAGATTTTATTGTTG TTTTAAAATATTAAT TERM 1189 817928 - 817955 + r 73 -6.6 -4.2142 | gap 1, opp_overlap 817925, overlap 817925 817931 TTATAAAAAAAACAA CAATAAAA-CTTT TTA AAAGATTTTATTG TTGTTTTAAAATATT PAa_0797 819117 - 818026 - | hypothetical protein TERM 1190 818343 - 818359 + g 70 -5.1 -4.72272 | TGCTATCTTTTACTT CCCATTT TTC AAAAGGG TTTTTCATAAACGGC TERM 1191 819205 - 819176 - R 75 -8.8 -3.25072 | gap 1, overlap 819171 TGTATCATAATCTAA TCTGGTAATGCAA AAAAA TTGCATTACC-GA CCAAACCATGTTTTA PAa_0798 822693 - 819199 - | hypothetical protein PAa_0799 824838 - 822721 - | Putative IMP dehydrogenase/GMP reductase TERM 1192 823029 - 823045 + g 70 -5.1 -4.72272 | TGCTATCTTTTACTT CCCATTT TTC AAAAGGG TTTTTCATAAACGGC TERM 1193 824055 - 824073 + g 74 -6.8 -4.29621 | overlap 824045 824052 GGTTTTTGATTGCTT CAATTTCA TTT TGAAGTTG TTTAATTTGTTTATC TERM 1194 824379 - 824397 + g 72 -6.8 -4.20888 | CATTGATTTGTTCGC GTTGATTT GAT AAATCAGC TATTTTTTGAATTAA PAa_0800 825276 - 825040 - | hypothetical protein TERM 1195 825206 - 825188 - G 77 -6.2 -4.72029 | GGTAATGGAAGAAAA TTAAAAAA GAT TTTTTTAA TGATAAACATTAAAG PAa_0801 825709 - 825269 - | hypothetical protein TERM 1196 825749 - 825763 + r 70 -3.6 -5.21459 | overlap 825751 TTTAATAACTTTTCT TTGTTT TTT AAACGA TTTCTTTTTGTTTTT PAa_0802 825913 - 825725 - | hypothetical protein PAa_0803 826713 - 826036 - | Putative N6 adenine-specific DNA methyltransferase TERM 1197 826177 - 826164 - G 70 -5.3 -4.53777 | opp_overlap 826162 826164 CTGAATGAAAAACAA CGTTT TCAA AAACG TCTTTGGGAAGACTA TERM 1198 826671 - 826690 + g 72 -6.6 -4.15029 | TATAAATAGTAGCTT TTTTTTCA TTTT TGAAAAAA TTATTTCTATCAACT huP 827027 - 826737 - | DNA-binding protein HU PAa_0805 827481 - 827020 - | hypothetical protein PAa_0806 827738 - 827562 - | hypothetical protein tmk 828405 - 827758 - | Thymidylate kinase PAa_0808 829027 - 828395 - | hypothetical protein PAa_0809 830333 - 829050 - | Replicative DNA helicase, prophage TERM 1199 830353 - 830380 + H 91 -8.6 -4.96773 | opp_overlap 830372, overlap 830364 830372 CAAACTCCTTTTTCT CAGTTTGGAT ACAAAAAA ATCCAAACTG TTTATTTTTAATTAA TERM 1200 830408 - 830372 - H 100 -10.5 -5.71712 | opp_overlap 830353 830364 830372 TTGGATACAAAAAAA TCCAAACTGTTTATT TTTAATT AATAAACAATTTGGA TAAATTTGTTGTTCT TERM 1201 831550 - 831525 - g 72 -4.9 -4.84219 | AAAGTACAAAATAAA CTAATTAAAAA AGGC CTTTTAATCAG CATGTCCAGCAAAGC PAa_0811 830826 - 831770 + | Putative phage integrase TERM 1202 831797 - 831821 + T 85 -10.1 -3.15638 | opp_overlap 831796, overlap 831801 ATGATAAAATCAACT GCAACCTTTTT TAA AGAGAGGTTGC TTCACTGTACATTTT TERM 1203 832072 - 832108 + T 73 -9.1 -2.87344 | opp_overlap 832092, overlap 832070 TGAAATTATCTATTA TTTTTTAGTTTTAAAGA ATA TTTTTAAAACAAAAAAA TGTCTAAAAAACATC TERM 1204 832121 - 832109 - T 80 -2.7 -6.09196 | TTTAAAACAAAAAAA TGTCT AAA AAACA TCATCTCCCCAGGTA PAa_0812 832525 - 832319 - | hypothetical protein TERM 1205 832607 - 832637 + r 100 -12.1 -5.46706 | gap 1, opp_overlap 832612, overlap 832612 AATGGGGTTTTACAA GAA-AAGACCGCTA AAAA TAGCGGTCTTATTC TTTTTCTTTTCCCAT TERM 1206 832612 - 832631 + r 100 -12.2 -4.42156 | opp_overlap 832612, overlap 832607 GGTTTTACAAGAAAA GACCGCTA AAAA TAGCGGTC TTATTCTTTTTCTTT TERM 1207 832631 - 832612 - R 100 -12.2 -4.77165 | opp_overlap 832612 832607 GGTTTTACAAGAAAA GACCGCTA AAAA TAGCGGTC TTATTCTTTTTCTTT PAa_0813 833429 - 832632 - | hypothetical protein TERM 1208 833564 - 833581 + r 74 -8.3 -3.42768 | opp_overlap 833564 TTTGTTAAAGAGAAA GGCCCGC TAGC GCGGACC TTGTGAAATTTTGAT TERM 1209 833581 - 833564 - R 95 -10.5 -4.32857 | opp_overlap 833564 TTTGTTAAAGAGAAA GGCCCGC TAGC GCGGACC TTGTGAAATTTTGAT PAa_0814 833975 - 833664 - | Single-strand DNA-binding protein of phage PAa_0815 834650 - 833979 - | DNA-directed RNA polymerase specialized sigma subunit TERM 1210 834748 - 834727 - R 88 -6.6 -5.60993 | TTGGGTACAAAAAAA GACCGACT AAAATA AGTCAGTC TTAAAGAATTTTTAA TERM 1211 835405 - 835383 - R 88 -6.4 -5.59502 | overlap 835388 TAAAAAATTAAAAAA GGATATTAAA TGT TTCAACATCC AATCAAGTCAAAAAA TERM 1212 835445 - 835431 - R 86 -2.9 -6.47325 | AAAAAATAAAAAAAA TTCAA AGTGA TTGAA AAATGAAAATCTACT pgsA 836295 - 835645 - | Phosphatidylglycerophosphate synthase TERM 1213 836192 - 836178 - G 71 -4.4 -4.82901 | CGGCTGCTATAAAAA TAATTT GAA AAATTA AAATGAATTTCCAAT TERM 1214 837029 - 837047 + H 83 -3.9 -5.96894 | AATAAGATATAATGG GTTTTGA GTTCA TCAAAGC TTTTTTTATTTGGGT TERM 1215 837198 - 837213 + H 86 -2.6 -6.47325 | overlap 837211 TTAAACATTGAAGGC TGACTT TTTT AAGTTA TTTTTTTTATTTTTT TERM 1216 837755 - 837741 - H 71 -6.4 -4.18018 | overlap 837742 TTTGTTTATTCAAAA CCCCAA TAT TTGGGA GCATTCGCTATTGGA TERM 1217 838200 - 838188 - H 77 -3.5 -5.69023 | overlap 838180 AAAATATCAAAAAAA TATTT TGC AAATA TACACAAAAGAAACA TERM 1218 838302 - 838281 - H 80 -3 -6.07374 | opp_overlap 838281 ATAAAAAATAAAAAA GCCACA AAAAGCAAAA TGTGGC ATTATTTTTTTGAAA TERM 1219 839243 - 839233 - g 80 -4 -5.57729 | AAATAAGACAAAAAA TGTT AGA AACA CAATTCAATCAAAAA PAa_0817 838920 - 839543 + | hypothetical protein TERM 1220 839571 - 839549 - T 81 -10.7 -2.59079 | opp_overlap 839549 ATTAAATTGAATTGA CCATCACTT TATTT AAGTGATGG TTTTTTTATTGGATA TERM 1221 839549 - 839571 + T 100 -10.7 -5.8187 | opp_overlap 839549 ATTAAATTGAATTGA CCATCACTT TATTT AAGTGATGG TTTTTTTATTGGATA PAa_0818 842364 - 839911 - | hypothetical protein TERM 1222 840443 - 840453 + g 70 -5.4 -4.4773 | opp_overlap 840443 AGTTTTGTAAACCAA CCTT GAG AAGG TTTTAATTGGTCTAA TERM 1223 841340 - 841354 + g 72 -5 -4.93547 | overlap 841341 CTTTTTTCAGCGTCT TTCCAA GTT TTGGAG TTTTTGATTGCTTCA TERM 1224 842692 - 842712 + H 74 -4.9 -5.20735 | TAATTTAATAGAGGT TATAAATAT TTT GTATTTATA TTTGTTTTTTATTAG PAa_0819 842798 - 844462 + | Putative kinase related to dihydroxyacetone kinase TERM 1225 844467 - 844499 + F 79 -8.7 -3.54129 | opp_overlap 844469, overlap 844469 844475 CATTAGAATAAAAAA AATAAAAATGGTCTT CAA AAGATCATTTTTATA TTTACCGCGGGTATG TERM 1226 844469 - 844497 + F 93 -11.3 -3.34715 | opp_overlap 844469, overlap 844467 844475 TTAGAATAAAAAAAA TAAAAATGGTCTT CAA AAGATCATTTTTA TATTTACCGCGGGTA TERM 1227 844497 - 844469 - f 100 -9.1 -6.17268 | opp_overlap 844469 844467 844475 TTAGAATAAAAAAAA TAAAAATGGTCTT CAA AAGATCATTTTTA TATTTACCGCGGGTA TERM 1228 844475 - 844491 + F 80 -5.9 -5.19879 | opp_overlap 844469, overlap 844469 844467 TAAAAAAAATAAAAA TGGTCTT CAA AAGATCA TTTTTATATTTACCG TERM 1229 844851 - 844809 - f 80 -9.6 -3.12342 | gap 1, opp_overlap 844825, overlap 844800 TTATAATAAAAATAT CAAAAAAAGCAATTCTTCT TTTGAT AAAAG-ATTGCTTTTTTTG ATATTTTTATTTTTA csp 845290 - 845523 + | Cold shock protein, similar to Csp of Bacteriophage bIL312 TERM 1230 845538 - 845565 + T 75 -8.7 -3.24166 | opp_overlap 845538, overlap 845533 ATATTTGCAATTTAA CAAAAAAAAGA TTAATT TCTTTTTTTTG TTGCATTAATTGCAT TERM 1231 845565 - 845538 - T 75 -8.7 -3.17901 | opp_overlap 845538 845533 ATATTTGCAATTTAA CAAAAAAAAGA TTAATT TCTTTTTTTTG TTGCATTAATTGCAT TERM 1232 845868 - 845878 + T 70 -2.6 -5.52384 | TCATACTTGTGATGG TTTT TAA AAAA TTTTTTTAGTCAAAA PAa_0821 847299 - 846475 - | Putative DNA replication protein TERM 1233 847045 - 847055 + g 71 -2.6 -5.51165 | opp_overlap 847045 CAGCTCACTATCAAA TAAA GCA TTTA TTTTTTTACAATTTT TERM 1234 847115 - 847129 + g 95 -4.2 -6.13 | opp_overlap 847113 847116, overlap 847116 GTAGGAACCAAAACA ACCCTT GGA AAGGGC TTTTTTTTTAACTCT TERM 1235 847128 - 847116 - G 78 -7.7 -4.34008 | opp_overlap 847115 847116, overlap 847113 TAGGAACCAAAACAA CCCTT GGA AAGGG CTTTTTTTTTAACTC TERM 1236 847116 - 847128 + g 77 -7.7 -4.2536 | opp_overlap 847116 847113, overlap 847115 TAGGAACCAAAACAA CCCTT GGA AAGGG CTTTTTTTTTAACTC TERM 1237 847316 - 847334 + r 77 -4.7 -5.30448 | opp_overlap 847319 AAAACTTCTCCTTTA TAATTCT TGTTT AGAATTA TTTTTATCTTTATTT dnaB2 849186 - 848017 - | Replication initiation/membrane attachment protein TERM 1238 848423 - 848440 + g 77 -2.1 -5.82388 | ATAATGATTTGTTCT TTATTAT TTTG ATGATAA TTTTTTTTGACATTT TERM 1239 848606 - 848594 - G 74 -4.9 -5.15634 | opp_overlap 848594 GACTCTACTAAAAAA GTTTT TTT AAAAC GTTCTGGCAAGGATG mutM 850018 - 849203 - | Formamidopyrimidine-DNA glycosylase TERM 1240 850165 - 850124 - R 70 -7.1 -3.73042 | gap 1, opp_overlap 850139, overlap 850122 TCTTTTATGAAAACA TTTAATTATTTT-TATTTTG CTT CAAATTATAAAATAATTAAA AAAACAAAAGAAGCA TERM 1241 850267 - 850279 + r 73 -3.5 -5.47218 | opp_overlap 850266 ATCATGCCCACAATG TTTTT TCT AAAAA TTTTTTTAGATAAAA polA 852532 - 850502 - | DNA polymerase I TERM 1242 850713 - 850683 - G 95 -9.2 -5.00616 | opp_overlap 850661 850689 850707, overlap 850662 TTTTTGTCTAAAAAA GGCAAAGAAAAACA AAA TATTTTTCTTTTCC AAAAAGTTTCTAAAT TERM 1243 852593 - 852575 - R 85 -6.1 -5.55664 | opp_overlap 852575 GGATTATGAAAAAAA GAAAGTT GAAAA AACTTTC TTTGAATTGTTATTT ffh 854349 - 852988 - | Signal recognition particle GTPase TERM 1244 854145 - 854163 + g 77 -7.6 -4.21471 | overlap 854144 854157 TAATGTGTTCTTTTG GTTTTAAA CCT TTTAAAAC TTCTTGTTTTAGGCT ftsY 855363 - 854368 - | Signal recognition particle-docking protein TERM 1245 855185 - 855171 - G 86 -5.7 -5.52986 | ACTGCATTAAAAAAA GCGTT GTTTT AACGC CAAAATCACTTTCTA TERM 1246 855491 - 855474 - R 100 -7.1 -6.23317 | opp_overlap 855474 ATAAAAAGAAAAAAA GAAACTT TCAA AAGTTTC TTTTTTTATATTAAT TERM 1247 855474 - 855491 + r 95 -7.1 -5.82172 | opp_overlap 855474 ATAAAAAGAAAAAAA GAAACTT TCAA AAGTTTC TTTTTTTATATTAAT PAa_0828 858328 - 855518 - | hypothetical protein TERM 1248 856034 - 856045 + g 70 -2.2 -5.50313 | CTCTAATTGAACTTG GCTA TCAG TGGC TTTTTTAATTTTATC TERM 1249 856286 - 856316 + g 100 -10.6 -4.73677 | opp_overlap 856289 856290 GTTACTTAATCTAAC TAATCCTAAAACAG CTT CTGTGTTAGGGTTA TTTCTTTGTTCTGGA TERM 1250 856312 - 856290 - G 73 -9.2 -2.63991 | opp_overlap 856286, overlap 856289 CTTAATCTAACTAAT CCTAAAACAG CTT CTGTGTTAGG GTTATTTCTTTGTTC TERM 1251 856517 - 856547 + g 100 -10.6 -4.73677 | opp_overlap 856520 856521 GTTACTTAATCTAAC TAATCCTAAAACAG CTT CTGTGTTAGGGTTA TTTCTTTGTTCTGGA TERM 1252 856543 - 856521 - G 73 -9.2 -2.63991 | opp_overlap 856517, overlap 856520 CTTAATCTAACTAAT CCTAAAACAG CTT CTGTGTTAGG GTTATTTCTTTGTTC TERM 1253 856748 - 856778 + g 100 -10.6 -4.73677 | opp_overlap 856751 856752 GTTACTTAATCTAAC TAATCCTAAAACAG CTT CTGTGTTAGGGTTA TTTCTTTGTTCTGGA TERM 1254 856774 - 856752 - G 73 -9.2 -2.63991 | opp_overlap 856748, overlap 856751 CTTAATCTAACTAAT CCTAAAACAG CTT CTGTGTTAGG GTTATTTCTTTGTTC TERM 1255 856979 - 857009 + g 100 -10.6 -4.73677 | opp_overlap 856982 856983 GTTACTTAATCTAAC TAATCCTAAAACAG CTT CTGTGTTAGGGTTA TTTCTTTGTTCTGGA TERM 1256 857005 - 856983 - G 73 -9.2 -2.63991 | opp_overlap 856979, overlap 856982 CTTAATCTAACTAAT CCTAAAACAG CTT CTGTGTTAGG GTTATTTCTTTGTTC TERM 1257 857210 - 857240 + g 100 -10.6 -4.73677 | opp_overlap 857213 857214 GTTACTTAATCTAAC TAATCCTAAAACAG CTT CTGTGTTAGGGTTA TTTCTTTGTTCTGGA TERM 1258 857236 - 857214 - G 73 -9.2 -2.63991 | opp_overlap 857210, overlap 857213 CTTAATCTAACTAAT CCTAAAACAG CTT CTGTGTTAGG GTTATTTCTTTGTTC TERM 1259 857441 - 857471 + g 100 -10.6 -4.73677 | opp_overlap 857444 857445 GTTACTTAATCTAAC TAATCCTAAAACAG CTT CTGTGTTAGGGTTA TTTCTTTGTTCTGGA TERM 1260 857467 - 857445 - G 73 -9.2 -2.63991 | opp_overlap 857441, overlap 857444 CTTAATCTAACTAAT CCTAAAACAG CTT CTGTGTTAGG GTTATTTCTTTGTTC TERM 1261 857672 - 857702 + g 100 -10.6 -4.73677 | opp_overlap 857675 857676 GTTACTTAATCTAAC TAATCCTAAAACAG CTT CTGTGTTAGGGTTA TTTCTTTGTTCTGGA TERM 1262 857698 - 857676 - G 73 -9.2 -2.63991 | opp_overlap 857672, overlap 857675 CTTAATCTAACTAAT CCTAAAACAG CTT CTGTGTTAGG GTTATTTCTTTGTTC TERM 1263 857903 - 857933 + g 100 -10.6 -4.73677 | opp_overlap 857906 857907 GTTACTTAATCTAAC TAATCCTAAAACAG CTT CTGTGTTAGGGTTA TTTCTTTGTTCTGGA TERM 1264 857929 - 857907 - G 73 -9.2 -2.63991 | opp_overlap 857903, overlap 857906 CTTAATCTAACTAAT CCTAAAACAG CTT CTGTGTTAGG GTTATTTCTTTGTTC TERM 1265 858921 - 858881 - R 100 -13.7 -5.44721 | opp_overlap 858872, overlap 858883 ATGAGTTTAAAAAAA TAGTCTTTTTTAATGTTTC CAA AAAACATTAAAAAAGACTC AAAAAAACCTCTAAA TERM 1266 858919 - 858883 - R 100 -16.3 -4.36089 | opp_overlap 858872, overlap 858881 GAGTTTAAAAAAATA GTCTTTTTTAATGTTTC CAA AAAACATTAAAAAAGAC TCAAAAAAACCTCTA TERM 1267 859006 - 858988 - R 70 -4 -5.23396 | overlap 858982 858990 AACAATTAATAAAAA TCTTTTAA AGG TTAAAAAA AATTGAAAAACTAAA TERM 1268 859294 - 859310 + r 75 -7.3 -4.21322 | opp_overlap 859294, overlap 859289 ATTAAAGAAAAAAAA GTAGCTT TTA AGGCTAC TTTGATTTATATTGG TERM 1269 859310 - 859294 - R 93 -5.1 -6.25578 | opp_overlap 859294 859289 ATTAAAGAAAAAAAA GTAGCTT TTA AGGCTAC TTTGATTTATATTGG TERM 1270 860020 - 860004 - R 72 -8.7 -2.53876 | opp_overlap 860017, overlap 860019 TCGGACTTGAACCGA CACGGCT ATA AGCCATG GGATTTTAAGTCCCA TERM 1271 862881 - 862892 + r 75 -7.2 -4.2354 | AGGATCTATTTCACT CCCC TTTC GGGG TTCTTTTCACCTTTC TERM 1272 863467 - 863483 + r 72 -8.7 -2.62396 | overlap 863469 TTGAACCACCGACCT CACGCTT ATC AGGCGTG TGCTCTAACCAACTG TERM 1273 863549 - 863526 - R 73 -3.2 -5.47399 | opp_overlap 863516, overlap 863527 TTAATCTTAAAAAAA CGAAAAACTT TTTT AAGTCTCTCA AAACTGAAGATGATA PAa_0829 867027 - 866800 - | hypothetical protein TERM 1274 866878 - 866849 - G 77 -9.5 -2.78384 | TCGTTTGGCATTACA CTCCTTTCTAAAA ACAT TTTTAGAAAGGAT ACGAAAGTTATTATT TERM 1275 866942 - 866919 - G 90 -6 -5.64274 | TCAGGTACAAAAAAA GACCGACTAA AAAA TAAGTCAGTC CTAAATTTTTTGAAA PAa_0830 867423 - 867178 - | hypothetical protein PAa_0831 868447 - 867434 - | hypothetical protein fragment TERM 1276 868740 - 868730 - H 90 -5.4 -5.84432 | overlap 868706 TATAACACAAAAAAA CAAG TTT CTTG CTTGGGTTATAATAT TERM 1277 869872 - 869838 - H 100 -7.5 -5.7946 | opp_overlap 869856 TTTTCAACAAAAAAA CAATCAACAATTATT TTTTT AATAATTATTAATTG CATAAAAATGTTATA fic 869925 - 870974 + | Putative regulation factor cAMP TERM 1278 871605 - 871582 - T 87 -6 -5.67063 | TTGAGTACAAAAAAA GACCGACTAA AAAA TAAGTCAGTC TCTAAAGTTTTTTTG PAa_0833 872364 - 871768 - | hypothetical protein fragment PAa_0834 873464 - 872550 - | hypothetical protein TERM 1279 874008 - 874032 + r 78 -5.7 -5.22039 | opp_overlap 874011, overlap 874010 874011 TGAAGGGTATAAAAA AAAGACCCATT AAA AATGGGTCATC TTTTTTGAGTTTAAC TERM 1280 874010 - 874030 + r 80 -8.3 -4.23298 | opp_overlap 874011, overlap 874008 874011 AAGGGTATAAAAAAA AGACCCATT AAA AATGGGTCA TCTTTTTTGAGTTTA TERM 1281 874029 - 874011 - R 100 -11.8 -5.94713 | opp_overlap 874010 874008 874011 AGGGTATAAAAAAAA GACCCATT AAA AATGGGTC ATCTTTTTTGAGTTT TERM 1282 874011 - 874029 + r 93 -11.8 -3.12352 | opp_overlap 874011, overlap 874010 874008 AGGGTATAAAAAAAA GACCCATT AAA AATGGGTC ATCTTTTTTGAGTTT TERM 1283 874333 - 874310 - R 73 -2.3 -5.72207 | opp_overlap 874313, overlap 874311 874313 TTTAAATTAAAAAAA TTAGCCCTC TAGCTT GAGGGCTTT AAGTATTTCAAAAAA TERM 1284 874313 - 874330 + r 76 -8.4 -3.81137 | opp_overlap 874311 874310 874313 AAATTAAAAAAATTA GCCCTC TAGCTT GAGGGC TTTAAGTATTTCAAA TERM 1285 874330 - 874313 - R 75 -8.4 -3.57012 | opp_overlap 874313, overlap 874311 874310 AAATTAAAAAAATTA GCCCTC TAGCTT GAGGGC TTTAAGTATTTCAAA TERM 1286 874366 - 874380 + r 79 -3.6 -5.68023 | overlap 874377 CTTTTTATTAAATTT TTTGTT GTT GACAAA TTTTTTTGGTTATAA TERM 1287 874554 - 874570 + r 86 -9.5 -3.93708 | opp_overlap 874554, overlap 874516 TTTTAAAAGAAAAAA GAGACTT AAA AAGTCTC TTTGGTAGTTTCTTT TERM 1288 874570 - 874554 - R 100 -9.5 -5.79595 | opp_overlap 874516 874554 TTTTAAAAGAAAAAA GAGACTT AAA AAGTCTC TTTGGTAGTTTCTTT nusB 874975 - 874559 - | Transcription termination factor sodA 875579 - 874968 - | Superoxide dismutase nox 876963 - 875623 - | Putative NADH oxidase H2O2-forming TERM 1289 875747 - 875765 + g 73 -4.6 -5.16572 | opp_overlap 875747 875751, overlap 875751 ATTTCGTTTTGAATA CAAACACT TAA AGTGTTTA TTTTTTCAGTTAAAT TERM 1290 875751 - 875761 + g 77 -5.4 -5.08015 | opp_overlap 875751 875747, overlap 875747 CGTTTTGAATACAAA CACT TAA AGTG TTTATTTTTTCAGTT acpS 877448 - 877074 - | Phosphopantetheinyl transferase (holo-ACP synthase) TERM 1291 877161 - 877145 - G 74 -8.1 -3.6682 | opp_overlap 877144 877139 877160 TGTGAGTGATGGAAA GAAAAAC TCT GTTTTTC CATTGTGGGTTTTCT TERM 1292 877689 - 877667 - H 73 -2.9 -5.63857 | gap 1, overlap 877668 877669 AAAAAGTTAAAAAAA TGTTTGCAAA ATAA TTTGCAAA-A TAAGAAAATAATCTG PAa_0839 878471 - 878659 + | hypothetical protein PAa_0840 878885 - 879328 + | hypothetical protein