TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.776283 %AT, 220426 nt, 2445 terms. Intergenic: 0.769473 %AT, H2T: 19159 nt, 253 terms; T2T: 2822 nt, 127 terms; H2H: 7673 nt, 208 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|161833634|ref|NC_010118.1| Candidatus Sulcia muelleri GWSS, complete genome (length 245530) TERM 1 108 - 85 - g 79 -7 -4.72643 | opp_overlap 84, overlap 104 TATCAAAAAAAAATA TTTAATATTA TAAT TAATATTAAA ATCTATAATAGATTT TERM 2 234 - 216 - g 81 -6.2 -5.01497 | opp_overlap 215 228, overlap 228 AGGATCATATAAAAA TTTATTAT TGA ATAATAAA AATATTATAATTTAT TERM 3 670 - 649 - g 85 -3.2 -6.3578 | opp_overlap 635, overlap 635 631 ATTTTAAAAAAAAAA TTAATTTT TTATTT AAAATTAA ATTTATCTAATTTCT lipB 1 - 687 + | lipoyl-[acyl-carrier-protein]-protein-N-lipoyltransferase TERM 4 2746 - 2702 - g 74 -5.5 -4.83759 | overlap 2694 2729 2730 AATCAAATTCAAAAA TTTTAAATAAAAAAATAAT AAATAAA ACTATTTTTTTTTTTAAAA AAATAATAAAATTAT TERM 5 2752 - 2729 - g 73 -4.8 -5.20331 | opp_overlap 2750, overlap 2702 2730 2750 AAATAATAAATAAAA CTATTTTTTT TTTT AAAAAAATAA TAAAATTATTTCATC TERM 6 3176 - 3164 - g 95 -3.5 -6.82322 | opp_overlap 3164 AAATAAAAAAAAAAA TTTTT ATA AAAAA AATGTTTTTAAAAAA TERM 7 3310 - 3288 - g 74 -5.8 -4.74132 | opp_overlap 3279 AGATTGTATTAAAAA TATTTTTCTT CTT AAAAAAAATA TAAATGAATTTTAAA valS 712 - 3324 + | valyl-tRNA synthetase TERM 8 3356 - 3380 + G 73 -4.5 -5.18158 | opp_overlap 3345 3352 3351 3353, overlap 3353 AGAATTAAAACTTTT TTTAAAAAAAT AAT ATTTTTTTTAA TTATTTTTTTTTGTT TERM 9 3884 - 3863 - g 78 -6.1 -4.74084 | opp_overlap 3862 AAATCAAAAGCAAAA TTATATTAT TATA ATAATATAA CATTTAAAGATGTCG TERM 10 3959 - 3936 - g 77 -5.4 -5.02645 | AAGAAATAAAAGAAA TAGTAGATTT TTTA AAATCTCCTA ATAAATATACTAAAT TERM 11 4460 - 4479 + G 82 -8 -4.60797 | opp_overlap 4447 4459 AAGAAAATAAAATTT TCTAAATC TATT GATTTAGA TTTTATATCTAGACA ftsH 3326 - 5200 + | putative ATP-dependent metalloprotease TERM 12 5346 - 5334 - g 100 -3.5 -6.91736 | AATAAAAAAAAAAAA TATAT TAA ATATA ACAGTCTCTGATTTA dnaN 5212 - 6312 + | DNA polymerase III, beta subunit TERM 13 6457 - 6437 - g 86 -4.9 -5.91981 | AAAAGTTAAAAAAAA TTTCTTTTT CAG AAAAAAAAA ATGAAAAATTAATTA TERM 14 6488 - 6466 - g 71 -3.6 -5.34208 | overlap 6470 AAAAAAAATGAAAAA TTAATTATTT GTA AAATAATAAA ATATGAAAATAATAA TERM 15 6537 - 6514 - g 70 -7 -3.73725 | opp_overlap 6516 AATAATAATTTTAAA TATTTTTTTA TTTT TAAAAAAATA AAATATAAAAAAATT TERM 16 6556 - 6541 - g 74 -3.4 -5.55855 | opp_overlap 6516 6541 TTTAAAAAAATAAAA TATAAA AAAA TTTATA ATATTATTTATAATT TERM 17 6570 - 6594 + G 74 -8.9 -2.90309 | opp_overlap 6570 6583, overlap 6567 TAATATTATTTATAA TTTTTTTTTAA AAT TTAAAAAAAAA TACTCTTCTTTAAAA TERM 18 6594 - 6570 - g 78 -8.9 -3.39482 | opp_overlap 6570 6567, overlap 6583 TAATATTATTTATAA TTTTTTTTTAA AAT TTAAAAAAAAA TACTCTTCTTTAAAA TERM 19 6617 - 6595 - g 100 -6.4 -6.17292 | opp_overlap 6567 6595 6598 6616, overlap 6583 6598 6610 6615 6616 AAATTTAAAAAAAAA TACTCTTCTT TAA AAGAAGACTA TTTAATAGAATTAAA TERM 20 6614 - 6598 - g 72 -8.1 -3.3979 | opp_overlap 6598 6595, overlap 6583 6595 6610 TTTAAAAAAAAATAC TCTTCTT TAA AAGAAGA CTATTTAATAGAATT TERM 21 6747 - 6761 + G 71 -3.6 -5.45802 | overlap 6756 TTTACCACCTGTTTA TCTTTT TAA GAAAGA TTTTTCTTTTAAAAA TERM 22 6822 - 6808 - g 89 -5.8 -5.64873 | opp_overlap 6808 6817 6818 6819 6821, overlap 6817 6819 TTTAATAATAAAAAA TGTATA AGA TATACA TATACTACTATATGT TERM 23 7022 - 6990 - g 70 -8.1 -3.13323 | opp_overlap 6988 6996, overlap 6988 6986 7009 AGATAAAATCATAGA TTTTTTTTTTAAAAT AAA ATTTTCAAAAAAAAA ACTTAAATTTAAATT TERM 24 7479 - 7457 - g 100 -5 -6.67286 | opp_overlap 7462 7471 7478, overlap 7471 TAAATAAAAAAAAAA TTAAAGAAAT ATT ATTTCTTTTA GAAATTTCTATATTA TERM 25 7774 - 7744 - g 95 -8.7 -5.12987 | TTAAATAAAAATAAA TATATAAATTATT TTAAT AATAATTTATATA AAAAAATAAATATAT TERM 26 7936 - 7915 - g 81 -6.1 -5.03145 | opp_overlap 7915 GAATGGGGTAAAAAA TATTTTTTT TATA AAAAAAATA TTATAGAAAACAAAA TERM 27 8110 - 8122 + G 74 -3.5 -5.55695 | GGTGTATCATTTTAT TATAA GAA TTATA TTTTTTGTATTATTG TERM 28 8365 - 8339 - g 100 -6.1 -5.77856 | opp_overlap 8326, overlap 8331 AAGAAATTAAAAAAA TTTCTTTTTCT ATAAA AGAAAAAAAAA TAATAAAAATCTGTT TERM 29 8385 - 8366 - g 87 -2.3 -6.55664 | TAAAAGAAAAAAAAA TAATAAA AATCTG TTTATTA GATGAATATAAATCA TERM 30 8421 - 8406 - g 75 -6.2 -4.6575 | ATATAAATCACAAAA TTTACC TTTT GGTAAA AAATCTTATACTATA TERM 31 8426 - 8438 + G 82 -4.9 -5.63517 | opp_overlap 8426 CTTTTGGTAAAAAAT CTTAT ACT ATAAG TTTTTTCTTTAAAGA pheT 6325 - 8547 + | phenylalanyl-tRNA synthetase beta subunit TERM 32 8651 - 8637 - g 73 -4.4 -5.243 | opp_overlap 8641, overlap 8629 8640 TAAATTATTAAAAAA TTATTT TTT AAATAA AAATTTTTTTTCAAA TERM 33 8641 - 8654 + G 72 -2.5 -5.75342 | opp_overlap 8629 8637 8640, overlap 8653 TTATTAAAAAATTAT TTTTT AAAT AAAAA TTTTTTTTCAAAAAA TERM 34 8671 - 8655 - g 76 -5.3 -5.27335 | opp_overlap 8655 8653, overlap 8640 TTTTTTAAATAAAAA TTTTTTT TCA AAAAAAA TAATTTTATTAGATA TERM 35 8682 - 8672 - g 72 -2.6 -5.75342 | opp_overlap 8653 TTTTTTCAAAAAAAA TAAT TTT ATTA GATATAAATACAAAA aroB 8581 - 9657 + | 3-dehydroquinate synthase TERM 36 11492 - 11470 - g 84 -9.4 -4.15197 | opp_overlap 11476 11488, overlap 11473 11476 11488 TAAATATTATATAAA TAATCATTAT GTA ATAATGATTA CAAAATCTGGTATAA TERM 37 11489 - 11473 - g 73 -6.7 -4.17416 | opp_overlap 11476 11488, overlap 11470 11476 11488 ATATTATATAAATAA TCATTAT GTA ATAATGA TTACAAAATCTGGTA gyrA 9644 - 12106 + | type IV DNA gyrase A subunit SMGWSS_009 12106 - 12624 + | putative methyltransferase TERM 38 12642 - 12662 + F 71 -8.5 -3.10597 | opp_overlap 12642 12644 12646, overlap 12641 12644 TATTTTAATTATATA TATATTCAT TAA ATGAATATA ATTTTCAATAAAAAA TERM 39 12662 - 12642 - f 71 -8.5 -3.00774 | opp_overlap 12642 12641 12644, overlap 12644 12646 TATTTTAATTATATA TATATTCAT TAA ATGAATATA ATTTTCAATAAAAAA TERM 40 14464 - 14446 - g 75 -6.2 -4.64766 | TCCATACTGGAAAAA TTATAAAA TTT TTTTATAA AGGAGCTATAATTAA rpsA 12654 - 14498 + | putative ribosomal protein S1 TERM 41 14991 - 14974 - g 81 -5.7 -5.18726 | opp_overlap 14958 14968 14967 TTCTTATAAGAAAAA GAAAAAA TTTT TTTTTTC GTTTAGCTAAAGTCA SMGWSS_011 14754 - 16028 + | putative type II NADH dehydrogenase rho 17183 - 16020 - | transcription termination factor Rho TERM 42 16796 - 16780 - G 86 -8.1 -4.81357 | opp_overlap 16776, overlap 16787 ATAGGAGAAAATAAA TCTACAA TTC TTGTAGA AATAGTTACTTTTTT TERM 43 17038 - 17024 - G 70 -7.2 -3.7108 | overlap 17026 ATCGTGATACGTAAA CATCAT CAT ATGATG ATAAATAATTATAAT prfA 17237 - 18304 + | peptide chain release factor 1 TERM 44 18555 - 18565 + G 84 -4 -6.22802 | opp_overlap 18552 18555 AAAAAAAATAAATAA TCTT GCT AAGA TTTTTTTTTATCAAA aroD 18433 - 18861 + | 3-dehydroquinate dehydratase fabF 20121 - 18865 - | putative 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 45 18954 - 18974 + g 73 -8.5 -3.15013 | opp_overlap 18959, overlap 18948 18951 18959 TTTTTTGTGCTTTAT TTAAAGTTA AAT TAACTTTAA TATCTATTCTAGAAT acpP 20353 - 20102 - | acyl carrier protein TERM 46 20313 - 20326 + g 70 -3.9 -5.3104 | TCTACCCCTAATTTT TCTAT TATA ATAGA TTTTATTTTTGATAA TERM 47 20387 - 20375 - R 72 -4.9 -5.07486 | opp_overlap 20375 20378, overlap 20378 TATTTTTAATAAAAA CTATA TAT TATAG TTAATATATTTTTTT TERM 48 20378 - 20395 + r 86 -4.3 -5.82388 | opp_overlap 20375 20378, overlap 20375 TTTTAATAAAAACTA TATATTA TAGT TAATATA TTTTTTTTAAAATTT atpC 20664 - 20365 - | putative ATP synthase F1, epsilon subunit TERM 49 20470 - 20489 + g 100 -6.6 -6.41805 | opp_overlap 20461, overlap 20451 ATTATATGATATATT TATATCAT TATT ATGATATA TTTTTTTTTTAATAA atpD 22166 - 20664 - | F0F1 ATP synthase subunit beta TERM 50 21254 - 21238 - G 70 -7.3 -3.63805 | ATTTCAGATGCTAAA GTAGGTT GAT AACCCAC AGCTGAAGGCATTCT TERM 51 22366 - 22346 - g 100 -9.9 -5.39905 | ATTAAATAATAAAAA TCTATTTCT TCT AGAAATAGA TAAAAAATATGTTGA TERM 52 22420 - 22432 + G 71 -3.5 -5.37593 | opp_overlap 22418 22420, overlap 22427 TTATAAAAAATAATA TTTTT AAT AAAAA TTTTTTAATTTGGAA TERM 53 22749 - 22770 + G 70 -4.5 -5.08601 | opp_overlap 22748 22751 22769, overlap 22751 TTAAAAAGAAAAGAT AATCTTCTT ATTA AAGAAGATA TTTTTATTAAAATAG TERM 54 22751 - 22768 + G 76 -7.1 -4.16909 | opp_overlap 22751 22748, overlap 22749 AAAAAGAAAAGATAA TCTTCTT ATTA AAGAAGA TATTTTTATTAAAAT TERM 55 22768 - 22751 - g 76 -7.1 -4.1922 | opp_overlap 22749 22751, overlap 22748 AAAAAGAAAAGATAA TCTTCTT ATTA AAGAAGA TATTTTTATTAAAAT ksgA 22188 - 22943 + | dimethyladenosine transferase TERM 56 22948 - 22968 + F 70 -7.1 -3.82789 | opp_overlap 22948, overlap 22941 CTAGCTTTTAAAAAA TTTTTTTTT TTA AAAAAAAAA TTGTATATTTATATT TERM 57 22968 - 22948 - f 83 -7.1 -5.02074 | opp_overlap 22941 22948 CTAGCTTTTAAAAAA TTTTTTTTT TTA AAAAAAAAA TTGTATATTTATATT TERM 58 23264 - 23247 - g 73 -4.3 -5.4251 | GGGATATAGAAAAAA TAATAAT TAGT ATTATTA GAACAATATTAATTG TERM 59 23285 - 23318 + G 80 -9.9 -3.08494 | overlap 23283 23283 ATATTAATTGTAATT TTTTTTATCTATTTC TATA GAAATAGAAAAAAAA TAATTTATAATTATT TERM 60 23331 - 23319 - g 83 -3.5 -6.15717 | opp_overlap 23283 23283 GAAATAGAAAAAAAA TAATT TAT AATTA TTTAAAAATTTCAAT TERM 61 23374 - 23388 + G 79 -3.6 -6.00086 | overlap 23358 TGCTGGTTCTATTAG CAATTT ATT AGATTG TTTTTTTTATGGTGT SMGWSS_021 23063 - 23644 + | putative signal peptidase TERM 62 23849 - 23818 - T 80 -6.8 -5.055 | opp_overlap 23797 23818 23823 23826, overlap 23839 GTAATTTTTAAAAAA TAACATAACTAGTT GGAA AACTAGTTGTATTA TTAAATACACTAAAA TERM 63 23879 - 23889 + T 80 -2.6 -6.09196 | ATTAATTTTTTTTGA TATA TCA TATA TTTTTTTATTTTAAA glnS 25538 - 23895 - | glutaminyl-tRNA synthetase TERM 64 24569 - 24584 + g 74 -6.2 -4.43012 | opp_overlap 24568 CTAGAATAGATATAT CGATAT GATT ATATCG TTTTGATATTCCAAT TERM 65 24771 - 24789 + g 79 -2.4 -6.28967 | overlap 24756 24773 TCTAGAAAATTCATA TTGTCTAG GTG TTAGACTA TTTTTTTTATTTATA TERM 66 24773 - 24787 + g 70 -5 -4.74858 | overlap 24756 24771 TAGAAAATTCATATT GTCTAG GTG TTAGAC TATTTTTTTTATTTA TERM 67 25293 - 25313 + g 79 -2.7 -6.22691 | overlap 25297 TAACCAAAAAATATC TTTTTTTAT ATA ATAAATAAA TTTTTTTTCTTCTTC gidA 27379 - 25544 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 68 25970 - 25952 - G 86 -7.6 -5.10029 | opp_overlap 25952 ATTAATTTTAAAAAA TAAAAAAC ATT GTTTTTTA TTTTTATTTTTATTT TERM 69 25952 - 25970 + g 100 -7.6 -5.77734 | opp_overlap 25952 ATTAATTTTAAAAAA TAAAAAAC ATT GTTTTTTA TTTTTATTTTTATTT TERM 70 27325 - 27306 - G 88 -12.2 -2.63596 | opp_overlap 27309, overlap 27288 27309 TTTGATCCTAGATTA GAAGCAGC TAAA GCTGCTTC TGATCCAGAATGTCC TERM 71 27309 - 27322 + g 72 -8.1 -3.4072 | opp_overlap 27306 27288 27309 GATCCTAGATTAGAA GCAGC TAAA GCTGC TTCTGATCCAGAATG TERM 72 27322 - 27309 - G 72 -8.1 -3.47078 | opp_overlap 27309, overlap 27306 27288 GATCCTAGATTAGAA GCAGC TAAA GCTGC TTCTGATCCAGAATG TERM 73 27366 - 27378 + g 70 -4.9 -4.82685 | opp_overlap 27365 ACAATTACATCATAT TGTTT AAC AAACA TATTTTTTTTTTAAA SMGWSS_025 27794 - 27369 - | hypothetical protein TERM 74 27974 - 27949 - g 74 -2.9 -5.79595 | gap 1, opp_overlap 27952 27954 27956, overlap 27952 27959 TTTTAAAATAAAAAA TA-ATATATTAT CAT ATAATATATATA ATGAACATAAAATTA TERM 75 27970 - 27952 - g 81 -6.2 -4.94109 | opp_overlap 27952 27954 27956, overlap 27949 27959 TAAAATAAAAAATAA TATATTAT CAT ATAATATA TATAATGAACATAAA TERM 76 28254 - 28239 - g 100 -7.6 -5.99318 | AAAAAAAAATAAAAA CTCTCT GTAA AGAGAG TAGAACAATAATTAT TERM 77 28353 - 28340 - g 70 -3.9 -5.14985 | opp_overlap 28332, overlap 28332 28346 GGAAATATAGAAAAA CAAAT TTCT ATTTG TAGAGAAATTTCTAA TERM 78 28393 - 28409 + G 95 -3.8 -6.79027 | opp_overlap 28407 ACAAACTATTATAGG GAATAT AAATG ATATTC TTTTTTTTTTTTCAA SMGWSS_026 27806 - 28501 + | S-adenosyl-L-methionine dependent methyltransferase TERM 79 28594 - 28611 + F 90 -4.3 -6.30182 | opp_overlap 28594 TAAAAAGTAATATAT TTAATTA TATA TAATTAA TTTTTTTTTATATGA TERM 80 28948 - 28935 - g 76 -8.1 -3.87454 | AAAGAAAAAAACAGA GCTCC TATT GGAGC AAAATTAGTATCTAA TERM 81 29488 - 29476 - g 73 -4.9 -4.96028 | opp_overlap 29485 29486, overlap 29486 TTTCAAAAAAAATAA CAATT TTA AATTG TGCGAAACTTTTTGC prsA 28623 - 29534 + | ribose-phosphate pyrophosphokinase TERM 82 29577 - 29567 - g 79 -2.6 -6.20267 | GGAAAAACAAAAAAA TTTT TAA AAAA GATAAATAATCGTGA rplY 29531 - 30097 + | ribosomal protein L25 TERM 83 30238 - 30208 - g 100 -10 -5.75342 | overlap 30212 TTTTTTTAAAAAAAA TTTATTCTATCTAT TCA ATAGATAGAAAAAA AATAGATAATTTAAT TERM 84 30234 - 30212 - g 83 -10.8 -3.05327 | overlap 30208 TTTAAAAAAAATTTA TTCTATCTAT TCA ATAGATAGAA AAAAAATAGATAATT TERM 85 30490 - 30506 + G 73 -5.3 -5.00895 | opp_overlap 30479 ATAATAGAAAAATTC TAAAAAA AAA TTTTTTA TTTTTATGTGATAAA lgt 30171 - 30917 + | prolipoprotein diacylglyceryl transferase atpG 31725 - 30868 - | ATP synthase F1, gamma subunit atpA 33305 - 31725 - | ATP synthase F1, alpha subunit atpH 33615 - 33283 - | highly suspect ATP synthase F1, delta subunit TERM 86 33379 - 33353 - G 71 -8.8 -2.64331 | overlap 33352 33350 GTAAAATTACAATAT TGATATTCTCCT TTT AGGAGAAAACCA CCAATAAGATTATTA TERM 87 33504 - 33494 - G 73 -4 -5.39407 | opp_overlap 33494 GATAAAAAAAATAAA TCTA TTA TAGA TAATTTTTGTTTTAA TERM 88 33607 - 33556 - G 73 -6.4 -4.21184 | opp_overlap 33549 33572, overlap 33549 AATATATATAAAGAA TAATTCTCTATTATCATTAATTAA CAAT TTAATTAATTTTAATAAAAAATTA GATATCATTAATCTT atpF 34297 - 33623 - | ATP synthase F0 subunit b TERM 89 33965 - 33981 + g 73 -4.5 -5.18297 | overlap 33966 TATTTTTTTTTTATT TTCAATT AAT AATTGAG TTTTATTTATTATTA TERM 90 34072 - 34083 + g 71 -3 -5.53079 | opp_overlap 34060 34072, overlap 34061 34060 AAGCTTCATTTATAA TGAA ATAT TTCA TTTTTTCTGTATTTT TERM 91 34093 - 34106 + g 87 -2.5 -6.60575 | ATTTCATTTTTTCTG TATTT TTTA AAATA TTTTTTTTTTTAAGT TERM 92 34158 - 34176 + g 70 -7.6 -3.55528 | overlap 34156 34154 TTTGCTTTTTCTGCA TTATTGAT TGA ATCAATAA TATATTTTTCACGTT atpE 34555 - 34331 - | ATP synthase F0 subunit c atpB 35612 - 34560 - | ATP synthase F0 subunit a TERM 93 34928 - 34910 - G 78 -7.6 -4.29153 | overlap 34908 TTATTAGAAAAAATA TTATCATT GAT AATGATAA AGTAACGCTAATATT TERM 94 35588 - 35559 - G 100 -5.3 -6.50278 | opp_overlap 35559 AAACCAAAAAAAAAA TATAAATAAAAAA CTTA TTTTTTTTTTATA TTTATATTTATATTT lysC 37035 - 35794 - | putative aspartate kinase TERM 95 35835 - 35849 + g 82 -4.4 -5.75342 | opp_overlap 35841, overlap 35841 CAGAATTAATTTGTC TTAAAA TTA TTTTAA TTTTTTTTAAAAAAA TERM 96 35875 - 35841 - G 82 -9 -4.08692 | opp_overlap 35835 35841 TAATTTGTCTTAAAA TTATTTTAATTTTTTT TAA AAAAAAATTAACATAA TTTACATTATAATGT TERM 97 35841 - 35875 + g 82 -9 -3.82484 | opp_overlap 35841, overlap 35835 TAATTTGTCTTAAAA TTATTTTAATTTTTTT TAA AAAAAAATTAACATAA TTTACATTATAATGT TERM 98 35912 - 35938 + g 84 -5.4 -5.46129 | opp_overlap 35912 35923, overlap 35902 GTATATAAATACACA TTATTTAATAAT TTT ATTATAAAATAA TTTTTTAATTTATTA TERM 99 36139 - 36157 + g 70 -7.6 -3.49677 | overlap 36138 ATGATTTTTTTTTAC TATAAAAC AAG GTTTTATA ATTTCTTTATTTATT TERM 100 36861 - 36879 + g 74 -6.2 -4.54253 | ATATTTTTATCTCTG TATTTTTT TTA AAAAAATA TTTATTTACTACTTT TERM 101 36987 - 36997 + g 77 -5.4 -5.00616 | TATATAAATTTTTTA CTCT TTT AGAG TTTTTTACAGAAGAG TERM 102 37163 - 37111 - R 80 -6.1 -5.26875 | opp_overlap 37083 37080 37118 37118 37120 37124 37135 37145, overlap 37080 37115 37135 37137 37145 TTTTCAAGTAAAAAA TAAATACTATTAATATAAATTATAT ATA ATATTATTAATATTAATAATATTAA ATTCTTATTAAACAA TERM 103 37159 - 37115 - R 83 -6.9 -5.12785 | opp_overlap 37080 37118 37118 37120 37124 37135 37145, overlap 37080 37111 37135 37137 37145 CAAGTAAAAAATAAA TACTATTAATATAAATTATAT ATA ATATTATTAATATTAATAATA TTAAATTCTTATTAA SMGWSS_039 37740 - 37171 - | MarC family integral membrane protein leuB 38871 - 37816 - | 3-isopropylmalate dehydrogenase TERM 104 37849 - 37873 + g 73 -5 -5.06735 | opp_overlap 37847 37849 ATTAATTAAAAAATC TCCTACTTCT TTAGT GGAAGAAGGA TTTTTATAATTTATG TERM 105 38399 - 38417 + g 70 -4.6 -5.09245 | opp_overlap 38399 38402, overlap 38377 38402 TCTTTTTTATTATAA GAACATAT ATC ATATGCTC TTTTTCTACTTTTAG TERM 106 38599 - 38617 + g 90 -7.5 -5.2166 | opp_overlap 38601 TTTTCTAAGTTTTAA TAGACCT TGTTC AGGTCTA TTTTTTAAATTATTA TERM 107 38871 - 38886 + g 87 -3.4 -6.34424 | CTATATTTTTTTCCA TATTTA ATTA TAAATA TTTTTTTTTTCAAAA leuD 39461 - 38874 - | 3-isopropylmalate dehydratase small subunit TERM 108 39071 - 39093 + g 79 -8 -4.21792 | opp_overlap 39070 39089, overlap 39060 GATTTAAAAAAATTT TTTTATAAAT TAA ATTTATAAAA TCTTTTTTAAGTTCT TERM 109 39275 - 39291 + g 87 -2.4 -6.60239 | overlap 39280 TTCCAGAATATTTTT TTTTAT TTAAT ATAAAA TTTTTTTTTATTTTT leuC 40854 - 39469 - | 3-isopropylmalate dehydratase large subunit TERM 110 40848 - 40864 + g 76 -6.7 -4.37871 | TCTCAAAAAGGGTTT TATTCAT TTT ATGAATA TTTAATTTTCTTTAA leuA 42013 - 40856 - | 2-isopropylmalate synthase TERM 111 41279 - 41297 + g 75 -9 -3.11955 | TTTAATTATCATTAC TACTTCTT CTA AAGAAGTA TTACCTGCTCGTTCT SMGWSS_044 42427 - 42065 - | hypothetical protein TERM 112 42126 - 42150 + g 73 -8.9 -2.64134 | opp_overlap 42126 42129, overlap 42122 42129 AGTTTTGAAATTAAA TAATTAATAAT TAT ATTATTAATTA TAAATTCATTTGATA TERM 113 42150 - 42126 - G 82 -8.9 -4.06055 | opp_overlap 42126 42122 42129, overlap 42129 AGTTTTGAAATTAAA TAATTAATAAT TAT ATTATTAATTA TAAATTCATTTGATA TERM 114 42332 - 42316 - G 71 -2.3 -5.84381 | opp_overlap 42316 TTACGAATAAAAAAA CATATAA TTT TAATATG TTTATATCATCATTA TERM 115 42500 - 42480 - H 72 -8.5 -3.27511 | opp_overlap 42479 42478 42480, overlap 42478 ATAATTTAATTAATA TCATTTTTT TAT AAAAAATGA ATAATTTTAATTTAA TERM 116 42777 - 42791 + G 79 -4.4 -5.63517 | opp_overlap 42776 42777 42790, overlap 42776 TAAAAAAAAAAGAAT TATTAT ATA ATAATA TTTTTTATTTAAAAA TERM 117 43308 - 43295 - g 72 -2.5 -5.71638 | opp_overlap 43295 GAACAAGCAAAAAAA TATAT TAAA ATATA TACTTTTCTTAAAAA TERM 118 43521 - 43494 - g 81 -8.8 -4.28187 | opp_overlap 43498 43512 43516, overlap 43498 43512 AAATAATAAACGAAA TAAATAAAAATT ATAT AATTTTTATTTA TAAAAATATTCCTCA tyrS 42497 - 43798 + | tyrosyl-tRNA synthetase TERM 119 43895 - 43881 - f 76 -4.4 -5.27335 | opp_overlap 43881 43881, overlap 43860 43875 43866 TTTTTTAAATAAAAA TTTTTT ATA AAAAAA AATATTATATATTAA TERM 120 44615 - 44594 - g 89 -6.1 -5.41746 | AATGGTTTAAAAAAA TTAAATTTT ACTG AAAATTTAA AAAAATCTCAAATAT TERM 121 45780 - 45765 - g 71 -3.4 -5.35222 | opp_overlap 45765 AAAAGCTACAAAAAA TTAATA TAGA TATTAA ATTTATTAAAAATAA TERM 122 46173 - 46163 - g 75 -4 -5.69976 | opp_overlap 46163 ATAAAAAAAATAAAA TCTA ATA TAGA ATCTTTTTCTTTTAA TERM 123 46499 - 46482 - g 70 -4.3 -5.17054 | opp_overlap 46492, overlap 46484 46492 ATAATATTGAAAAAA TTTTATT AAAT AATAAAA ATACTATTTATTATT leuS 43913 - 46579 + | leucyl-tRNA synthetase TERM 124 46762 - 46752 - g 71 -6.8 -4.14345 | opp_overlap 46758 TAATAGTAAAGTAAA CTGG TGT CCAG GATGTGGAAATTTTT TERM 125 47259 - 47249 - g 91 -5.4 -5.85178 | opp_overlap 47236, overlap 47236 AACATTTAAAAAAAA TGCT TAT AGCA AGTAATAACCATATA TERM 126 47361 - 47322 - g 90 -11 -3.65201 | opp_overlap 47325 TAACATTTTTAATAA TGGTGTATTTGACTCTTT TACG AAAGAGTCAAATACATTA TATCTTGAGCAAAAA TERM 127 47325 - 47358 + G 100 -17.1 -3.68024 | opp_overlap 47322 CATTTTTAATAATGG TGTATTTGACTCTTT TACG AAAGAGTCAAATACA TTATATCTTGAGCAA TERM 128 47406 - 47380 - g 76 -3.8 -5.86061 | opp_overlap 47381, overlap 47381 CTTGAGCAAAAAAAA CCATTATCTTTT GGA AAAAGAAAATGT ATATTATTATATAAT TERM 129 47405 - 47381 - g 74 -7.3 -4.10552 | opp_overlap 47381, overlap 47380 TTGAGCAAAAAAAAC CATTATCTTTT GGA AAAAGAAAATG TATATTATTATATAA korB 46732 - 47616 + | 2-oxoglutarate ferredoxin oxidoreductase beta subunit TERM 130 47749 - 47739 - g 78 -4 -5.79635 | opp_overlap 47739 47741, overlap 47740 47741 AAAAAAAAAATAAAA TCTA AAT TAGA TAATTTAATTTATTA TERM 131 47951 - 47937 - g 77 -5.8 -5.03945 | opp_overlap 47948, overlap 47945 47947 GAAGAAGTACAAAAA GAAAAA AAT TTTTTC TATAAAGAAATTCTT TERM 132 47977 - 47945 - g 82 -2.9 -6.23317 | opp_overlap 47948, overlap 47937 47947 47963 ACAAAAAGAAAAAAA TTTTTTCTATAAAGA AAT TCTTTATAAAAGAGA AATTATTAATAATTA serS 47610 - 48854 + | seryl-tRNA synthetase rpmB 48858 - 49091 + | 50S ribosomal subunit protein L28 TERM 133 49194 - 49179 - g 82 -2.6 -6.47325 | opp_overlap 49193, overlap 49193 AAAAAATAAAAAAAA TAATCC AGAA AGATTA GAATTAAAAAAATAT TERM 134 49228 - 49212 - g 73 -6.7 -4.28925 | opp_overlap 49193, overlap 49195 49193 ATTAAAAAAATATAA TTCTATT TTA AATAGAA AAACAATTCATAAAG rpmG 49072 - 49254 + | 50S ribosomal protein L33 SMGWSS_052 49261 - 49383 + | hypothetical protein rluD 50499 - 49486 - | ribosomal large subunit pseudouridine synthase D TERM 135 49617 - 49639 + gF 95 -3.6 -6.67286 | AAGCTTGATATTTCA TATTAATAAA TAA TTTTTTAATA TTTTTTTTTTCTTTA TERM 136 50223 - 50246 + gF 78 -7.6 -4.22009 | opp_overlap 50223 TTTCAGGTATAATAT TTTTTTTTCC TTCA GGAAGAAAAA TTTCTATTACATCAT TERM 137 50406 - 50418 + gF 85 -3.5 -6.26417 | TTAAGTTTTCTTTTT TTTTT ACT AAAAA TTTTTTTTTATCATA TERM 138 50549 - 50531 - gR 93 -2.5 -6.56554 | overlap 50518 50533 50548 AATACAAAAAAAAAA TATTTCT GTACA AGAAACA ATAGAAAACTGTTTA TERM 139 50685 - 50671 - gR 95 -5.8 -6.15828 | opp_overlap 50670 50671 50681, overlap 50681 TTTATGAAAAAAAAA TTCTAT TAT ATAGAA ATTTTCTATTTAAAT TERM 140 50886 - 50874 - gR 77 -3.5 -5.79635 | overlap 50880 AAAAAAAAAATAAAA TTAAA TCC TTTAA ATAAAGGTGCAAAAA truA 50463 - 51215 + | tRNA pseudouridine synthase A rpoC 55730 - 51207 - | DNA-directed RNA polymerase beta' subunit TERM 141 51298 - 51311 + g 82 -5.3 -5.52986 | opp_overlap 51297, overlap 51297 TCACCAATTATAATT TCTTC ATAA GAAGA TTTTTTTAATCCAGT TERM 142 52885 - 52907 + g 86 -7.8 -4.98522 | overlap 52870 52884 52886 GTAAGAGGAGATCTT ACTTCAATAG TAT CTATTGAAGC TTTTTCTATAAGATT TERM 143 52886 - 52906 + g 90 -11.3 -3.58029 | overlap 52884 52885 TAAGAGGAGATCTTA CTTCAATAG TAT CTATTGAAG CTTTTTCTATAAGAT TERM 144 53150 - 53161 + g 71 -5.8 -4.57837 | opp_overlap 53149 GTCTTGTTAAATATC CAGC ATCT GCTG TTTTTAAAGCAGTAT TERM 145 53547 - 53561 + g 87 -3.6 -6.34616 | overlap 53546 TACTTTTTCAATAGC TCTTTT TAC AAGAGA TTTTTTTTCTTTTGG TERM 146 54146 - 54130 - G 76 -7.3 -4.26076 | TGATCTCCATCAAAA TCAGCAT TAA ATGCCGA ACAAACTAATGGATG TERM 147 54639 - 54657 + g 76 -9 -3.23466 | opp_overlap 54638 54641, overlap 54636 54632 TTCATTACGTAATAT TATTTCAG GAG CTGAAATA TGTATTAATCTTTTT TERM 148 55181 - 55154 - G 76 -7.2 -4.31835 | AACGTTCATAATAAA TTATCATATCAA GTTG TTGAGATGATAA TCCTAAAATAGAACC TERM 149 55603 - 55621 + g 71 -6.2 -4.323 | overlap 55601 TGTTTTTTACTCATT TTATTAAT AAA ATTAATAA TTTTCAATATTTGAA TERM 150 55633 - 55654 + g 71 -6.7 -4.14454 | overlap 55624 ATAATTTTCAATATT TGAATTTGA TTCC TCAGATTCA TTGGTTTTTTTATTT rpoB 59727 - 55741 - | DNA-directed RNA polymerase beta subunit TERM 151 55975 - 55988 + g 73 -6.7 -4.24606 | overlap 55965 AGGTATTCCTGGATT GGGAA TTGT TTCCC TTTTAACTATAGCTT TERM 152 56549 - 56561 + g 74 -6.3 -4.41206 | ATTCCTTTATTTCCA TGTCT TCC AGACA TTTTATCACCTACTT TERM 153 57119 - 57132 + g 83 -6.7 -5.06103 | overlap 57109 AAGTTTTCTTCTGAA GAAGG ATAT CCTTC TTTTTTAGGAGTTAT TERM 154 58226 - 58238 + g 75 -6.3 -4.65494 | opp_overlap 58226 CCCCCAGGACCTAAA GAAGA TAT TCTTC TTTTATGTGTCATTT TERM 155 58852 - 58869 + g 71 -2.1 -5.81622 | overlap 58844 58842 58844 TATCTTATAATAAAG TATTATA TCTA TATGATA TTTTTTTAATTTTAT TERM 156 58955 - 58969 + g 84 -7.2 -5.05228 | opp_overlap 58955 ATTCTAGCTGCAAGA GTTCTT CCT AAGAAC TTTTTATAATTTACT rplL 60168 - 59737 - | 50S ribosomal subunit protein L7/L12 TERM 157 60184 - 60199 + r 83 -3.4 -6.09888 | opp_overlap 60195 60196 60198, overlap 60175 60192 60196 GGTTTTTAAATTTTT TATAAT ATTA ATTATA TTTTTTTTATTAAAA rplJ 60634 - 60209 - | 50S ribosomal subunit protein L10 rplA 61266 - 60631 - | 50S ribosomal subunit protein L1 rplK 61696 - 61274 - | 50S ribosomal subunit protein L11 TERM 158 61664 - 61674 + g 75 -2.6 -6.04378 | TCCACCTTTTATTTG TAAT TTT ATTA TTTTTTTTATAGTTT tufA 63131 - 61944 - | elongation factor Tu TERM 159 63985 - 63975 - g 72 -2.6 -5.8096 | opp_overlap 63975 63983, overlap 63983 TATAAAAAATAAAAA TAAT GAA ATTA TTATACAGAATAATA TERM 160 64743 - 64725 - g 73 -4.6 -5.1287 | opp_overlap 64725 64727, overlap 64727 TGGATATGTAAAAAA TATGGATA AAA TATCCATG TTTAATGATTTTACT TERM 161 64741 - 64727 - g 76 -7.2 -4.19215 | opp_overlap 64727 64725, overlap 64725 GATATGTAAAAAATA TGGATA AAA TATCCA TGTTTAATGATTTTA SMGWSS_068 63607 - 64899 + | cytochrome c TERM 162 65275 - 65259 - g 71 -3.8 -5.41787 | TAAAAAAGAGAAAAA TATCTT GGAAA AAGATA GATAAAATTATAATT TERM 163 66021 - 66009 - g 73 -4.9 -5.00616 | opp_overlap 66016, overlap 66016 GTTTTTTTGAAAAAA TTGAT AAT ATCAA AGATATTCCATTAAC TERM 164 66461 - 66448 - g 75 -3.9 -5.57765 | AAAAAAAAAAATAAA TAAGT TTGA ACTTA GGTTATATACTAAGG TERM 165 66998 - 66988 - g 72 -2.6 -5.84011 | AATAAAAAATAAAAA TAAT AAA ATTA ATGGTAATAAAATTA TERM 166 67093 - 67079 - g 79 -7.2 -4.46514 | opp_overlap 67079 67090 ATTGATTTAAATAAA TGTACA GGA TGTACA TCATGTATAATTGCT SMGWSS_069 64916 - 67849 + | molybdopterin oxidoreductase, iron-sulfur binding subunit TERM 167 68430 - 68417 - g 70 -3.9 -5.1417 | overlap 68411 68410 TGATAAAACTAAAAA TCTTT TAAA AAAGA AAATATATAAAATAT TERM 168 68620 - 68631 + G 73 -4.4 -5.15117 | TTCCCCCATATTTTG TAGC TGGA GCTA TTTTTTCAGGTTTTG SMGWSS_070 67851 - 69209 + | molybdopterin oxidoredutase membrane subunit TERM 169 69293 - 69275 - g 82 -4.6 -5.71983 | overlap 69279 TTAAGTATAAAAAAA TTAATCCA TTA TGGAATAA AAATTAATGAAATTT SMGWSS_071 69206 - 69733 + | hypothetical protein TERM 170 69786 - 69800 + G 82 -4.4 -5.75342 | opp_overlap 69786 69788, overlap 69780 ATATGTTGATAATTA TATTAT GTA ATAATA TTTTTTTTCCGAGAA TERM 171 70058 - 70038 - g 77 -5.5 -4.94243 | CGAAAAAAATTAAAA TTTCTCCTC TAA AAGGAAAAA GAACCTCTATACTTA SMGWSS_072 69773 - 70324 + | hypothetical protein TERM 172 70330 - 70320 - f 70 -2.6 -5.47399 | TGAATTTGAAAAAAA TATA ATT TATA TGAGTAATTTTTATA TERM 173 70972 - 70943 - g 79 -10.3 -2.83487 | opp_overlap 70943 70971, overlap 70942 70940 70945 70948 AATAAAATTAAATAT TACAACAGAATAT ACAA ATATTCTGTTATA TTTATAATAATATAT TERM 174 70943 - 70972 + G 77 -8.1 -4.01184 | opp_overlap 70943 70942 70940 70945 70948, overlap 70971 AATAAAATTAAATAT TACAACAGAATAT ACAA ATATTCTGTTATA TTTATAATAATATAT TERM 175 70970 - 70945 - g 72 -8.5 -2.93992 | opp_overlap 70943, overlap 70943 70942 70940 70948 TAAAATTAAATATTA CAACAGAATAT ACAA ATATTCTGTTA TATTTATAATAATAT TERM 176 70967 - 70948 - g 74 -8 -3.58511 | opp_overlap 70943, overlap 70945 70943 70942 70940 AATTAAATATTACAA CAGAATAT ACAA ATATTCTG TTATATTTATAATAA SMGWSS_073 70361 - 71566 + | hypothetical protein sufE 71977 - 71558 - | cysteine desulfurase SufE subunit TERM 177 71599 - 71585 - G 71 -5.8 -4.67943 | opp_overlap 71592, overlap 71580 TTTTAATACATAAAA CTTAAT TTT ATTAAG AATGATTAATAATCC TERM 178 71853 - 71905 + g 73 -4.8 -5.18726 | gap 1, opp_overlap 71871 TATTTATCAATAAGA TATTTTTTATTTAATAAAGGTAG AAGTTTAC CTATTTTTATTAAA-AAAAAATA TTTTTCTTCTAAAGA ispB 72973 - 71993 - | polyprenyl synthetase TERM 179 72979 - 73005 + H 73 -3.2 -5.45802 | opp_overlap 72979, overlap 72979 72977 GAATTAACATAATTA TTATTATAAATA ATG TATTTGGAATAA TTTTTATTTTAAAAA TERM 180 73046 - 73024 - H 79 -3.6 -5.78622 | opp_overlap 73024 73026 73033, overlap 73026 73043 TTATTTTAAAAAAAA GATATTATTT ATT AAATAATATA TTATATTTTTAATAT TERM 181 73044 - 73026 - H 72 -6.2 -4.53853 | opp_overlap 73024 73026 73033, overlap 73024 73043 ATTTTAAAAAAAAGA TATTATTT ATT AAATAATA TATTATATTTTTAAT TERM 182 73162 - 73178 + H 81 -5.3 -5.40474 | TAACAATTGTTGTGT TAAATAA GAT TTATTTA TTTTTTTAAAAAGGT TERM 183 73701 - 73688 - H 75 -3.9 -5.5353 | TATATGAATAAAAAA TTCTA ATTA TAGAA ATAATTGAAGGTAAT TERM 184 74757 - 74738 - H 75 -9.2 -2.65808 | overlap 74734 74735 AGTCGTAACAAGGTA GCCGTACC GGAA GGTGCGGC TGGAACATTTCTGTT TERM 185 74824 - 74802 - H 70 -3.4 -5.40072 | overlap 74805 CCTTTTTTAAAAAAA TAAGAGGCTT TTA AAGTCTCGTA GCTCAGTTGGTTAGA TERM 186 74821 - 74805 - H 70 -5.1 -4.79949 | overlap 74802 TTTTTAAAAAAATAA GAGGCTT TTA AAGTCTC GTAGCTCAGTTGGTT TERM 187 75242 - 75259 + H 73 -7.1 -4.04394 | GAATAGGGGAACTTG CTGAATA TTTA TATTCAG TTTCATTAATTTGAA TERM 188 75629 - 75617 - H 70 -6.3 -4.2354 | GAAAGGTGAAAAGAA CTTCT AAT AGAAG AGTGAAATAGATCCT TERM 189 76414 - 76396 - H 79 -8.9 -3.57798 | TATAAGTAACGATAA TGCAGGT GAGAA ACCTGCA CACCGAAAGACTAAG TERM 190 76836 - 76857 + H 74 -5.9 -4.56597 | opp_overlap 76828 76839 76847 76848 AAATAGACCTGTAAC TTAGGGAAA AAGG TTGCCCTAA TTTTTAGGGCCGCAG sucC 78159 - 79334 + | succinyl-CoA synthetase beta subunit SMGWSS_082 79658 - 79491 - | putative Sec-independent tatA/E protein translocase TERM 191 79750 - 79740 - g 81 -4 -6.00814 | AATAATTAAAAAAAA TGAA TTA TTCA ATTGAATTTAAAAAA TERM 192 80106 - 80126 + G 81 -7.6 -4.70353 | opp_overlap 80106 CTATATGTACAGGAA TAGCTGCT TCTAT GGCAGCTA TTTTACTTTGTTCTG clpP 79739 - 80398 + | ATP-dependent Clp protease, proteolytic subunit TERM 193 81181 - 81166 - g 73 -7.6 -3.82098 | opp_overlap 81164 81166 TATAACTAATTTAAA CTCTCT TGAG AGAGAG TCTTTAAAAAGAATA clpX 80411 - 81442 + | ATP-dependent protease ATP-binding subunit TERM 194 82805 - 82833 + G 100 -9.9 -5.61596 | opp_overlap 82805 ACTGGAATCAAAAAA CTAAAAATATTAT TTA ATAATATTTTTGG TTTTTTTATAGAAGT TERM 195 82833 - 82805 - g 90 -7.7 -5.27477 | opp_overlap 82805 ACTGGAATCAAAAAA CTAAAAATATTAT TTA ATAATATTTTTGG TTTTTTTATAGAAGT TERM 196 82979 - 82958 - g 71 -5.9 -4.29436 | opp_overlap 82956, overlap 82956 CATGAAATAAAAATA CTTTCTTCT AAAG AGAAGATAG AATCTATAGAAAATA TERM 197 83701 - 83688 - g 78 -3.9 -5.75342 | opp_overlap 83688 83700 TTTCTGTAAAAAAAA TAGAT GATA ATCTA ATTTTTACAAGAAAA mutS 81443 - 83998 + | DNA mismatch repair protein MutS TERM 198 84031 - 84015 - T 75 -9.5 -2.62616 | TCATTTGGTAGAGTA CTACCTT GCC AAGGTAG TGGTAGCGGGTTCGA rpsB 84827 - 84159 - | 30S ribosomal subunit protein S2 TERM 199 84381 - 84393 + g 91 -4.9 -6.28631 | AGAATTCATTTTAGA TATAG ATC CTATA TTTTTTTTTAATTTA rpsI 85214 - 84834 - | 30S ribosomal subunit protein S9 rplM 85671 - 85219 - | 50S ribosomal protein L13 TERM 200 85947 - 85957 + G 73 -4 -5.47159 | overlap 85935 AGCTGTTACTAATCC TAGT AAA ACTA TTTTTTCTATTAAAC dnaK 85762 - 87654 + | molecular chaperone DnaK TERM 201 88075 - 88065 - g 73 -4 -5.34381 | opp_overlap 88065 AAATCTAAAGAAAAA GTAA AAT TTAC AATTTTTTTTAAAGG infC 87687 - 88235 + | translation initiation factor 3 rpmI 88241 - 88438 + | 50S ribosomal subunit protein L35 TERM 202 88743 - 88759 + G 72 -8.1 -3.54741 | opp_overlap 88753 TAGCAGATTTAGCTA TGAAGAA TAA TTCTTCA TTTAAGAAAATGATA rplT 88445 - 88807 + | 50S ribosomal subunit protein L20 def 89352 - 88783 - | peptide deformylase TERM 203 88834 - 88858 + g 74 -8.9 -2.9732 | opp_overlap 88819 88832 88837, overlap 88820 88831 88837 TTTATATAATTTAGA TAATTTATATA ATT TATATAAATTA TAATTTAAATTAAAA TERM 204 89022 - 89032 + g 75 -2.6 -5.98675 | CATCATAATATTCTA TAAT TAT ATTA TTTTTTCTTTTTATA SMGWSS_096 89774 - 89358 - | Holliday junction resolvase-like protein dapD 89814 - 90644 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 205 91638 - 91658 + G 73 -8.5 -3.13773 | opp_overlap 91636 91638, overlap 91637 TATGAAAAAAGAATA TCTTTTTTT TTA AAAAAAAGA CTTTTAGATATACAA TERM 206 91658 - 91638 - g 79 -8.5 -3.93875 | opp_overlap 91638 91637, overlap 91636 TATGAAAAAAGAATA TCTTTTTTT TTA AAAAAAAGA CTTTTAGATATACAA ilvE 90672 - 91718 + | branched-chain amino acid aminotransferase SMGWSS_099 93052 - 91715 - | tRNA nucleotidyltransferase TERM 207 91887 - 91897 + g 91 -2.4 -6.87161 | opp_overlap 91875 91887 TGATCACCTGATATA GGGG ACA CCCA TTTTTTTTTTTTATC TERM 208 92506 - 92523 + g 79 -7.1 -4.40993 | opp_overlap 92499 92506, overlap 92499 TAAATTCATATAAAA TTCTTTC TATA GAAAGAA TTTTCATAATTTGTA TERM 209 92523 - 92506 - G 79 -7.1 -4.59081 | opp_overlap 92506 92499, overlap 92499 TAAATTCATATAAAA TTCTTTC TATA GAAAGAA TTTTCATAATTTGTA TERM 210 92616 - 92626 + g 73 -4 -5.43329 | opp_overlap 92616 AGAGAATCATATGAA TCTA TAG TAGA TTTTATTTTATTTTT trmU 94202 - 93060 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 211 93575 - 93593 + g 84 -6.2 -5.27023 | opp_overlap 93588, overlap 93571 93588 TTTCTGCTAATTTTT TTTTTAAA AAA TTTAAAAA TTTTATTTTTCCAAT dnaJ 95320 - 94199 - | chaperone protein dnaJ TERM 212 94671 - 94699 + g 100 -6.1 -6.34424 | opp_overlap 94678 CCTTCAGTTACTCCA GGAGGAATAGTAA TAC TTACTAATTCTTC TTTTTTTTTTAAACC grpE 95866 - 95333 - | heat shock protein GrpE (Hsp-70 cofactor) TERM 213 95527 - 95581 + g 79 -2.7 -6.11392 | gap 2, opp_overlap 95534 95536 95552 95554, overlap 95538 TATTTTTTAATATTT TATAA-AATTTTTCTTTAA-TCAAAGA TAT TCCTTGAATTAAAGGAACATTATTATA TTTTTTTATTTCTTT TERM 214 96380 - 96344 - g 100 -10.5 -5.19879 | opp_overlap 96351, overlap 96338 CTTTAAAGATAAAAA TACTATTTCTATTTTAG ATT CTAAAATAGAGATAATA AAATTTACTTATGCT lpdA 95982 - 97379 + | dihydrolipoamide dehydrogenase TERM 215 98254 - 98236 - g 71 -6.2 -4.21438 | TACGTGAACAAATAA TTTTTATT GCT AATAAAAA GAATTTATCCTTTCA SMGWSS_104 97467 - 98462 + | M42 family metalloprotease SMGWSS_105 98754 - 98449 - | putative ribosome-binding factor A TERM 216 99018 - 99032 + G 74 -2.2 -5.95539 | ATAAAAAGCAAATTA TTGATA AGG TATTAA TTTTTTTATTTAAAA TERM 217 99449 - 99437 - g 71 -3.5 -5.3671 | overlap 99426 AATATAATTAAAAAA TTAAA AAC TTTAA TAAGATCATTTAAAA TERM 218 99797 - 99785 - g 79 -4.9 -5.44119 | opp_overlap 99770, overlap 99791 TTTATTTTAAAAAAA GTAAA ATC TTTAC AAGAAAAATACCCTA TERM 219 99843 - 99822 - g 100 -6.1 -6.3578 | opp_overlap 99822 99824, overlap 99838 ACCCTAAAAAAAAAA TATTTATTA TTAT TAATAAATA TGATTTAATTAAAAA TERM 220 99898 - 99888 - g 72 -2.6 -5.71983 | opp_overlap 99888 TTAATTATAAAAAAA TATT TAA AATA TCTGCTAAATATGGA trmE 98831 - 100195 + | tRNA modification GTPase TrmE TERM 221 101005 - 100988 - g 84 -4.3 -6.28401 | opp_overlap 100993, overlap 100993 CAAAAAACAAAAAAA TAAAATT AAAA AATTTTA ATATTGAAAATAAAT TERM 222 102554 - 102538 - g 70 -5.3 -4.77719 | overlap 102530 102548 GAAAATGTAATAAAA TTAAAAA AAA TTTTTAA AGAAAAAAAAACTTT TERM 223 102561 - 102548 - g 75 -2.5 -6.07969 | overlap 102538 TAAAATTAAAAAAAA TTTTT AAAG AAAAA AAAACTTTACAGTCT TERM 224 104054 - 104042 - g 84 -4.9 -5.82036 | ATAATAAAGAAAAAA TTCTT GGA AAGAA AATTAATATATGTGG TERM 225 104296 - 104282 - g 70 -4.4 -4.98616 | opp_overlap 104273, overlap 104273 104291 TTAAAATATTAAAAA TATTAA ATA TTAATA AAGTATTAAAACTAT TERM 226 104386 - 104374 - g 76 -3.5 -5.8187 | opp_overlap 104374 GATTTAATAAAAAAA TTAAA AAA TTTAA TTTTCAAAAATTTAG TERM 227 104479 - 104452 - g 100 -7.3 -5.79635 | AAAAAAAAAAGAAAA TATTTATCAAA ACAATA TTTGATAAATA TAAATCATAATTTGT SMGWSS_108 100318 - 104553 + | putative DNA polymerase III, alpha subunit (dnaE)/DNA polymerase III, epsilon subunit (dnaQ) fusion TERM 228 105129 - 105112 - g 75 -4.3 -5.5319 | TAAAAAAAAAAGAAA TTTAAAT AATT ATTTAAA TAAAGGAGATAAAAT SMGWSS_109 104576 - 106318 + | putative argininosuccinate synthase (argG)/acetyltransferase activity of N-acetylglutamate synthase (argA) TERM 229 106637 - 106622 - g 71 -3.4 -5.50774 | opp_overlap 106609 106626 106630 TAGAATAAATAAAAA TTTTTT CTTT AAAAAA AGAATTTTTAATTAT TERM 230 106626 - 106641 + G 70 -4.8 -4.95876 | opp_overlap 106622, overlap 106609 106630 ATAAATAAAAATTTT TTCTTT AAAA AAAGAA TTTTTAATTATGGTT TERM 231 107151 - 107130 - g 80 -7.5 -4.37337 | opp_overlap 107134 ATAAATACCAATAAA TGTATTTTA AATT TAAAATACA TTAAAAATAAACTAA argC 106311 - 107288 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 232 108290 - 108272 - g 100 -6.2 -5.72207 | overlap 108282 TTTAAAGTAAAAAAA TTAATAAA TAT TTTATTAA AAAAAGAAAAAATTT argD 107288 - 108433 + | acetylornithine aminotransferase TERM 233 108673 - 108657 - g 74 -2.3 -5.9667 | opp_overlap 108657 108660 AAAAATATAAAAAAA TTTTTTG AAT CAAATAA TATTCATGTTTCTGG carA 108423 - 109499 + | carbamoyl phosphate synthase small subunit TERM 234 110414 - 110433 + G 76 -6.4 -4.43844 | opp_overlap 110397 110414 GCGTTAGCTTCTAAA GCTACAGG ATAT CCTTTAGC TTTTATAGCTGCTAA carB 109496 - 112684 + | carbamyl phosphate synthase large subunit argF 112684 - 113640 + | putative ornithine carbamoyltransferase TERM 235 114372 - 114358 - g 77 -5.8 -5.07011 | opp_overlap 114357 TATATAAAGTAAAAA TATCTA ATA TAGATA ATCCTTTAAATAAAT argB 113637 - 114416 + | acetylglutamate kinase TERM 236 115074 - 115058 - g 79 -3.7 -6.06723 | overlap 115060 GTTTTTAAAAAAAAA TCCCCTA TAT TAGGAAA TATAAAATTAACAGT SMGWSS_116 114407 - 115474 + | putative acetylornithine deacetylase (argE)/succinyl-diaminopimelate desuccinylase (dapE) TERM 237 116089 - 116103 + G 85 -2.9 -6.48081 | AATTTTATTTGTGAT TCTTT GAGTA AAAGA TTTTTTTTTTATAAA aroK 115708 - 116193 + | shikimate kinase TERM 238 116261 - 116243 - g 100 -6.2 -5.73978 | overlap 116232 116229 ATTATAAATAAAAAA TTTTATTT AAA AAATAAAA AAATATATGTATCAG TERM 239 116465 - 116449 - g 70 -5.3 -4.81249 | opp_overlap 116449 GTTTAAATCTAAAAA TTTTAAT CCA ATTAAAA GTAATTTTTCAATTC TERM 240 117158 - 117125 - g 70 -7.1 -3.57783 | opp_overlap 117131 117133, overlap 117133 117152 GTAGTAGAATTAGAA TATAATAATTTTTTT TTTA AAAAAAAATATTATA TACATAATATAGATA TERM 241 117167 - 117152 - g 79 -3.4 -6.06723 | opp_overlap 117131, overlap 117125 TTTTTTAAAAAAAAA TATTAT ATAC ATAATA TAGATACTATCAAAA TERM 242 117223 - 117199 - g 79 -10.3 -2.87132 | TCCTTTTTTTATATA TTTTTTTCTTT CAG AAAGAAAAAAA AAAGAATCATCTACA tilS 116201 - 117511 + | putative tRNA(Ile)-lysidine synthetase trpA 118256 - 117501 - | tryptophan synthase subunit alpha TERM 243 118203 - 118215 + g 95 -3.5 -6.82322 | opp_overlap 118203 GCCAGCAGTGAAATA TATAT TTA ATATA TTTTTTTTTTTATTT SMGWSS_122 120036 - 118249 - | bifunctional phosphoribosylanthranilate isomerase/tryptophan synthase subunit beta TERM 244 118317 - 118330 + g 78 -3.9 -5.81412 | opp_overlap 118328 TCCCAGACATATTTA TGATT ACCA AATCA TTTTTTTTAAATGAA TERM 245 118947 - 118961 + g 76 -7.2 -4.34345 | opp_overlap 118940 TATTAACAGCTATTA TGTTAG CCC CTAACA TTTTCATCCTATATA TERM 246 119601 - 119616 + g 71 -3.4 -5.44119 | opp_overlap 119601, overlap 119601 AGTTATAATTATAAA TTTTTT CCCA AAAAAA TTTTTTTCCACTACC TERM 247 119909 - 119928 + g 77 -6.5 -4.56775 | opp_overlap 119909 119907 GGAGCTAAAAAATTA TCTCCTA CAAATC TAGGAGA TTTTTCAAAAAAAAT TERM 248 120025 - 120042 + g 81 -4.3 -5.94713 | opp_overlap 120034 120036 TATTTTTATTTTTCT TTTTTTA AACA TAAAAAA TTTTTTTTATAAAAT trpC 120820 - 120029 - | indole-3-glycerol phosphate synthase activity of trpC TERM 249 120255 - 120235 - G 82 -9.9 -3.50335 | opp_overlap 120234 120229, overlap 120229 TTTTAGAAAGATTAA TATCTACAT TAA ATGTAGATA AATCTCTATTATTTA TERM 250 120696 - 120726 + g 95 -4.2 -6.79027 | opp_overlap 120691, overlap 120692 120698 TTATATTTAATTCTT TTTTTTAAAGAAAG ACA TTTTCTTTTAAAGA TTTTTTTTTTTTCAA trpG 121806 - 120820 - | anthranilate phosphoribosyltransferase TERM 251 121035 - 121052 + g 79 -3.5 -5.93809 | overlap 121030 TATTTTTACCTCCTT TTAATTC TAAA GGATTAA TTTTTTTTATACCAA TERM 252 121109 - 121084 - G 74 -6.1 -4.38154 | opp_overlap 121083 121084, overlap 121086 ATATTCTGGAGAAAA GATATGTTCCC CTTG GGGATCATAAC ATTTTAAATCAGATG TERM 253 121107 - 121086 - G 71 -7.3 -3.79687 | opp_overlap 121084 121083, overlap 121084 ATTCTGGAGAAAAGA TATGTTCCC CTTG GGGATCATA ACATTTTAAATCAGA trpD 122375 - 121803 - | anthranilate synthase component II TERM 254 122223 - 122274 + g 74 -7.2 -4.06892 | gap 1, opp_overlap 122231 122234 122264, overlap 122234 122248 GACACCTGGTCCAGG TGATAAAAT-AATTTTATTAAAATT TTC AATTTTATTTAAATTGATTTTATCA TTTCTGTAAACTTCT trpE 123786 - 122377 - | anthranilate synthase component I TERM 255 123962 - 123927 - g 74 -5.6 -4.82901 | GTTTGGGTATAAAAA CTAGGTCTATTCTTGA ATAT TCAAGAATAAATATAG CAAATATATTAAATG TERM 256 124224 - 124213 - g 71 -3 -5.59502 | GAAAAAATTAAAAAA GAAT AATA ATTC ACCTATTTTAGTAAG iscS 123800 - 124939 + | cysteine desulfurase proS 126411 - 124942 - | prolyl-tRNA synthetase TERM 257 126280 - 126300 + g 79 -6.9 -4.65916 | opp_overlap 126296 AAACTTAATTTTTTC CCATATAGA AAA TCCATATGG TTTTATTACCATACA TERM 258 126541 - 126517 - g 76 -3.7 -5.89947 | overlap 126523 TAAATCTAAAAAAAA TAATTATTCAT ATT ATGAATCATCA GATTTTAAACCTTTA TERM 259 126581 - 126597 + G 70 -8.1 -3.08278 | opp_overlap 126581 126571, overlap 126583 TATAATAGAATTAAA TATTCTG TTA CAGAATA TATATATCTACTTAC TERM 260 126597 - 126581 - g 77 -8.1 -4.09827 | opp_overlap 126581 126583, overlap 126571 TATAATAGAATTAAA TATTCTG TTA CAGAATA TATATATCTACTTAC TERM 261 127365 - 127351 - g 93 -7.2 -5.41359 | opp_overlap 127351 127349 127361 AATTAAATTAAAAAA CGATAT TCA ATATCG TGTTAGATATGATAT TERM 262 127683 - 127671 - g 84 -6.3 -5.24531 | opp_overlap 127671 127669 127675 ACCGTGCACAAAAAA TCCTT GAT AAGGA TCATTTTGGAATTGA SMGWSS_129 126467 - 129034 + | ATP-dependent protease TERM 263 129319 - 129330 + G 71 -5.8 -4.55295 | opp_overlap 129317 129319 AAGAAATTATATATA CACC TAAT GGTG TTTCTTTATCAGAAA TERM 264 129469 - 129451 - g 73 -7.4 -3.90241 | overlap 129453 TAGGAATTAGAATAA CACCCAAT ATT ATTGGGGG TGGAAATAAAAAAAT TERM 265 129467 - 129453 - g 75 -8.6 -3.52995 | overlap 129451 GGAATTAGAATAACA CCCAAT ATT ATTGGG GGTGGAAATAAAAAA lysA 129045 - 130244 + | diaminopimelate decarboxylase TERM 266 130727 - 130753 + G 81 -10.2 -3.21747 | GGGGAGGGAGATCTT CTGCACGAGAAA CAG TATCTCGTGTAG TTGCTGGTGCAATAG TERM 267 130813 - 130830 + G 74 -8.5 -3.29324 | opp_overlap 130809 130808 TTTATAAAAGCCTAT GTTTCCT CTAT AGGAAAC TTAAATTTCAGTGAA TERM 268 131305 - 131295 - g 71 -5.4 -4.58283 | overlap 131300 TAATTTTTTTAAAAA CCAA ATT TTGG TAAAAGGTCGTCATG aroC 130348 - 131418 + | chorismate synthase TERM 269 132076 - 132060 - g 74 -7.3 -4.08651 | overlap 132064 ACGTGAAGTAAATAA CCCATAC CCG ATATGGG TAAAAAATCCAATAA TERM 270 132922 - 132912 - g 75 -2.6 -6.09133 | overlap 132897 TATTTTAAAAAAAAA TATT GAC AATA ATAAATTTCTAATAA TERM 271 133150 - 133140 - g 78 -4 -5.82388 | opp_overlap 133140 AAATCTTAAAAAAAA TCTT ATA AAGA ATTCATTACATTTGA htpG 131425 - 133245 + | heat shock protein 90 TERM 272 133263 - 133251 - T 74 -4.9 -5.093 | opp_overlap 133251 133259, overlap 133246 133259 133261 TTCAAAATAAGAAAA TCATA TCA TATGA TTTTACAAATCATAT TERM 273 133259 - 133277 + T 72 -7.6 -3.5627 | opp_overlap 133251 133246 133259 133261, overlap 133251 AAGAAAATCATATCA TATGATTT TAC AAATCATA TTTCCACAATCATCT SMGWSS_134 134545 - 133256 - | putative MiaB-like protein TERM 274 133475 - 133485 + g 70 -4 -5.28281 | opp_overlap 133475, overlap 133480 TTTTTCTTTTGAAAG TCTT ATA AAGA TTTTATTTCTTTTAT TERM 275 134181 - 134208 + g 76 -3.6 -5.82316 | opp_overlap 134172 134187, overlap 134172 TAAATATTCTTATCT TTTAAAGAAAGA AATT TCTTTTTATAAA TTTTTTTTAAATGAT secA 137614 - 134558 - | translocase TERM 276 134641 - 134631 - G 72 -2.6 -5.82388 | opp_overlap 134631, overlap 134634 AAATTGTAAAAAAAA TTAT TAA ATAA TTTAAAAGCTTTTAT TERM 277 134748 - 134772 + g 77 -2.9 -6.07627 | overlap 134751 ATATGGGTTTTCCAT TTATCATCTAT AAA ATAGAGGATTA TTTTTTTTTCAAGAT TERM 278 134751 - 134769 + g 70 -4.6 -5.09685 | overlap 134748 TGGGTTTTCCATTTA TCATCTAT AAA ATAGAGGA TTATTTTTTTTTCAA TERM 279 134860 - 134874 + g 89 -4.4 -6.20267 | CATTTATAGAATATG TAAAAT ATG ATTTTA TTTTTTTGTTTTTAC TERM 280 134878 - 134896 + g 76 -4.7 -5.43487 | AATATGATTTTATTT TTTTGTT TTTAC AACAAAA TTTTTTATATGATTT TERM 281 134970 - 134980 + g 87 -2.6 -6.53504 | overlap 134965 TAATATTTATTTATT TTAT AAT ATAA TTTTTTTTTTATATC TERM 282 135161 - 135143 - G 83 -10.4 -3.15236 | opp_overlap 135143 135138 135134 TAAATTTATATTTAA TGCATTTC TGC GAAATGCA TATATAAATTTTCTT TERM 283 135143 - 135161 + g 83 -10.4 -3.0246 | opp_overlap 135143, overlap 135138 135134 TAAATTTATATTTAA TGCATTTC TGC GAAATGCA TATATAAATTTTCTT TERM 284 135740 - 135754 + g 82 -4.4 -5.77571 | AAAAATTATTTCATT TATAAT TGC ATTATA TTTTTCTTTTTTAGT TERM 285 136574 - 136588 + g 76 -3.6 -5.75822 | opp_overlap 136575, overlap 136575 ATTTAAAAAATAAAG TTGTTT CTT AAACAG TTTTTTTACTTTGTC TERM 286 137436 - 137409 - G 75 -8.6 -3.53091 | opp_overlap 137409 AGTTTTTTTTGTAAA CCAAATTTCTTT TCAT AAAGAGATTTGG TTTTTTTTTTTATTC TERM 287 137409 - 137436 + g 100 -10.8 -6.77747 | opp_overlap 137409 AGTTTTTTTTGTAAA CCAAATTTCTTT TCAT AAAGAGATTTGG TTTTTTTTTTTATTC TERM 288 137529 - 137541 + g 76 -4.9 -5.25735 | opp_overlap 137524, overlap 137513 137533 AAAAAAAAATTTATT TTGTT TAA AACAA TTTTTAATTTTTTAA TERM 289 137533 - 137548 + g 71 -3.4 -5.4387 | opp_overlap 137524, overlap 137529 AAAAATTTATTTTGT TTAAAA CAAT TTTTAA TTTTTTAATTTCTAT TERM 290 137568 - 137588 + g 70 -7.1 -3.59079 | overlap 137564 137559 TTAATTTCTATTTTA TTTTTTTTT TTA AAAAAAAAA TTAATTATATTATTT rplS 137710 - 137997 + | 50S ribosomal subunit protein L19 SMGWSS_137 138001 - 138261 + | ferredoxin (4Fe-4S) TERM 291 138330 - 138350 + G 78 -6.3 -4.81551 | TATTAAGTTCTTTTA TTTCTTTTT CAG AAAAAGGAA TTTTTAATATAAATA TERM 292 138474 - 138457 - g 71 -7.1 -3.78699 | TAAAAATATAGATAA GAAATCA TGTA TGATTTC TAAAAAGAAAATGAT TERM 293 138498 - 138520 + G 71 -6.5 -4.05747 | opp_overlap 138497 AAATGATAATAGCAT TGATAATAT TTAGT ATATTATCA TTTATATCGCATATG TERM 294 138980 - 139009 + G 73 -7.5 -3.78124 | opp_overlap 138963 138978 138980 138988, overlap 138988 139008 TATGTATTTATAACA TATAAAAGTATAT ATCA ATATATTTTTATA TTATTAATAATTCCT menA 138245 - 139141 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase thrC 140440 - 139136 - | threonine synthase TERM 295 139223 - 139239 + g 86 -6.7 -5.27399 | TAGAAGCTTTATTAC TTTCTTT TCT AAAGAAA TTTTTTGATCTATTC TERM 296 139295 - 139319 + g 100 -6.7 -6.4275 | CACTGGAGCAGCTGT TGATAAAAAAA TAT TTTTTTTATTA TTTTTTTTATTTTTA thrB 141376 - 140444 - | homoserine kinase thrA 143825 - 141378 - | aspartokinase/homoserine dehydrogenase TERM 297 142531 - 142508 - G 71 -8.3 -3.28712 | overlap 142511 CTGGTTTTTTTATAA CAACTGAAA TATTTT TTTCAGTTG AGCCTTGAGCAATAG TERM 298 143180 - 143164 - G 86 -9.5 -4.17556 | CATATTTCTAATAAA TCTGCTT TTA AAGCAGA AGCAACAATACATGC TERM 299 143276 - 143296 + g 73 -8.5 -3.11289 | overlap 143274 143274 TAATATATTGTGATT TTTCTTTTT TAA AAAAAGAAA TAATTTTAGAATTAC maeA 145420 - 144137 - | putative NAD(P)-dependent malic enzyme TERM 300 145014 - 145042 + g 82 -8.3 -4.62102 | opp_overlap 145014 145018, overlap 145016 TTAATATCTTCTAAA TTTATTCCACCAA AAG TTGGTGCAATAGA TTTTACTATTTTTAT TERM 301 145016 - 145040 + g 71 -8.7 -2.59266 | opp_overlap 145014 145018, overlap 145014 AATATCTTCTAAATT TATTCCACCAA AAG TTGGTGCAATA GATTTTACTATTTTT TERM 302 145425 - 145439 + r 86 -4.4 -5.9873 | opp_overlap 145425 AATTTATTCATAAAA TATTAT TTA ATAATA TTTTTTTTATACTAA SMGWSS_146 145981 - 145529 - | hypothetical protein ccoP 146773 - 145985 - | putative cytochrome c oxidase, cbb3-type, ccoP subunit TERM 303 146580 - 146596 + g 95 -3.8 -6.69613 | ATTAAATTATTTTCA TCTAAA CTATT TTTAGA TTTTTTTTTTTCTAA TERM 304 146771 - 146754 - G 77 -8.5 -3.74519 | AATATTTTTATTAAA GCTCTAT GCTT ATAGAGC AAGAGCACTTAAAGT TERM 305 146884 - 146872 - R 70 -3.5 -5.40873 | opp_overlap 146872 146883, overlap 146883 AATATAAAAATAAAA TATAT AAA ATATA TTAATAATATTATAT SMGWSS_148 149168 - 146958 - | bifunctional; cytochrome c oxidase, cbb3-type, ccoN subunit/ccoO subunit TERM 306 147044 - 147056 + g 76 -3.5 -5.81032 | TTAAAGGTATAAATT TATTA CCA TAATA TTTTTTTTGAAATTC TERM 307 149132 - 149150 + g 81 -6.2 -5.10064 | opp_overlap 149132 AAAATGCTTTTACAA TTTTATTA TCA TAATAAAA TTTTTCTATATTGGC SMGWSS_149 149298 - 149173 - | hypothetical protein SMGWSS_150 151709 - 149322 - | cation transport ATPase, E1-E2 family protein TERM 308 149764 - 149774 + g 79 -2.6 -6.28967 | opp_overlap 149764, overlap 149760 TTAGATGGTAATAAA TATT TTA AATA TTTTTTTTCTTTATC TERM 309 149824 - 149852 + g 79 -4.7 -5.60993 | opp_overlap 149833, overlap 149822 AATAATTTATATTCT TTACTTAAAGTTT TTA AAACTTTTCGTAA TTTTTTTCTAAAAAA TERM 310 149854 - 149868 + g 76 -4.4 -5.37593 | overlap 149853 149861 AAAACTTTTCGTAAT TTTTTT CTA AAAAAA TTTTTTACTTTAAAA TERM 311 149885 - 149869 - G 79 -5.3 -5.40072 | opp_overlap 149861 TTTTTTCTAAAAAAA TTTTTTA CTT TAAAAAA ACCAATTGTCTTTTT TERM 312 150154 - 150183 + g 79 -8.1 -4.15669 | opp_overlap 150156, overlap 150152 TTTAGTTTTTTATCA TATCCAATATGTT CTCC AAAATATTGGATA TTTGATTTATCAATT TERM 313 150978 - 150999 + g 73 -7.5 -3.85835 | opp_overlap 150976 150974, overlap 150976 150974 150994 TAATACTAAAATTCC TATAGAAAT AGGT ATTTCTATA TTTAGATATTTATTT TERM 314 151477 - 151489 + g 76 -3.5 -5.76633 | overlap 151466 GTAATTTTATTATCA TAATA AGA TATTA TTTTTTTATATATAG TERM 315 151580 - 151600 + g 76 -7.1 -4.34789 | opp_overlap 151579 TTAATTCATAATATT TTAATAAAT TAT ATTTATTAA TTATTTTATAAATTG TERM 316 151676 - 151694 + g 85 -10.4 -3.22886 | opp_overlap 151674, overlap 151674 151672 151689 TATTAGTAATACATT TGTTACCA CAA TGGTAACA TGTCTTATGTAACAT engA 153344 - 152043 - | GTP-binding protein EngA TERM 317 152814 - 152826 + g 86 -4.9 -6.08563 | ACGTCCTACTATAGC TATTC TAG GAATA TTTTTTTTATATATT lipA 154201 - 153341 - | lipoyl synthase rpmH 154337 - 154173 - | 50S ribosomal subunit protein L34 TERM 318 154204 - 154214 + gH 88 -4 -6.32976 | TGTTTTTTTTCATCA CTTA CAG TAAG TTTTTTTCTTTTTTT TERM 319 154644 - 154658 + G 70 -7.2 -3.68836 | TTGTTCCACCTATGT TTGCAT ATG ATGCAA TTATTGAATCAATAT TERM 320 154754 - 154744 - g 75 -2.6 -5.93252 | GCTAAAAATAAAAAA TATT ATT AATA AAAAAAAAAATTGTA sucD 154415 - 155290 + | succinyl-CoA synthetase, alpha subunit SMGWSS_155 155917 - 155303 - | CAAX amino terminal protease family protein TERM 321 155501 - 155520 + g 71 -6.6 -4.15044 | opp_overlap 155501 TAATAATACATTTAA TATTATTC CTCT GAATAATA TTTCTTCACAGAAGG korA 157946 - 156195 - | putative 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit TERM 322 156512 - 156536 + g 89 -4.5 -6.17669 | CTTTTTTTTTTCCTA TATTTATTTTT TGA AAAGGTAAATA TTTTTTTATTTTATT SMGWSS_159 158728 - 157949 - | Mrp/Nbp35 family ATP-binding protein TERM 323 158533 - 158547 + g 93 -5.8 -6.09196 | opp_overlap 158533 TTTTATTATTATCAA TTTCTA TTA TAGAAA TTTTTTTATTTTCAA TERM 324 158696 - 158708 + g 74 -3.5 -5.55695 | opp_overlap 158704, overlap 158699 158704 CCCTTTTCCAGAGGC TATTA CAA TAATA TTTTTTATATTATTA trpS 159680 - 158721 - | tryptophanyl-tRNA synthetase TERM 325 158840 - 158852 + g 79 -3.5 -5.99154 | TTTTTTTATTTTTTA TATAA AAT TTATA TTTTTTTCTTTCATA TERM 326 158919 - 158949 + g 76 -6.4 -4.43879 | overlap 158921 158922 TTTTGCTTTTTTATA TGTTTTTTTTTTTT TTA AAGAAAAAAAATCA TTTTCATTAGCTAAT TERM 327 159579 - 159595 + g 74 -8.1 -3.71527 | opp_overlap 159572 AATAAATACACTTTC TAGTGAA TTA TTCACTA TTTCAATAATTGGAA TERM 328 160148 - 160169 + r 74 -6.1 -4.68103 | AATTATAAAGGCTTT TTTTATTTT AAAA AAAATAAAA TTTTATTAAAATTAA TERM 329 160180 - 160170 - R 73 -2.6 -5.66926 | overlap 160171 TTAAAAAAAATAAAA TTTT ATT AAAA TTAACAAATTATTTT TERM 330 160884 - 160869 - R 77 -3.4 -5.71712 | opp_overlap 160869, overlap 160880 TTTTAGATAAAAAAA TTATAA AAAA TTATAA TATTTATATGAATAG TERM 331 161958 - 161978 + r 70 -7.1 -3.77302 | opp_overlap 161957, overlap 161957 161953 TCTCTTTTATTAGAT TTTTTTTTT TTA AAAAAAAAA TTGATTTTATCATCA TERM 332 162363 - 162373 + r 86 -2.6 -6.36459 | opp_overlap 162359 TTTTAATATTATTTA TTTT AAA AAAA TTTTTTTTTATTAAA TERM 333 162759 - 162773 + r 82 -4.4 -5.68489 | opp_overlap 162759 TATTATTAATATTAA TTATTA TTA TAATAA TTTTTTCTTCTTATA TERM 334 162885 - 162916 + r 70 -2.7 -5.47964 | gap 1 TATTAAATTATATGG TAATTAT-ATTAAT TTCGT ATTAATCATAATTA TTTTTATTCTTTTAT SMGWSS_162 166394 - 162978 - | putative outer membrane protein TERM 335 163777 - 163788 + g 77 -3 -6.01369 | opp_overlap 163777 ATTTGATTATAATCA TCAT ATTT ATGA TTTTTTTCTTCTTTA TERM 336 164024 - 164035 + g 82 -3 -6.22802 | TATCAATTTTAAATT CTAA ATTG TTAG TTTTTTTTTCTAAAA TERM 337 164476 - 164495 + g 76 -5.2 -5.1848 | opp_overlap 164478 TTATTACCTTGATAG TATATATT TCCT AATATATA TTTTTTACCTTCATT TERM 338 164662 - 164678 + g 77 -3.1 -6.02914 | overlap 164663 TTAATTTCTATTTTA TTTAAAA CTT TTTTAAG TTTTTTTTCTGTAAA TERM 339 165485 - 165497 + g 76 -3.4 -5.81032 | opp_overlap 165485, overlap 165491 ACCCATTTTCATTAA TCTC TGTTT GAGA TTTTTTTTCAAATTC TERM 340 166479 - 166453 - H 77 -6.9 -4.66625 | opp_overlap 166463, overlap 166439 166467 166470 ATATATATAAATAAA TATATATAAAT AAATA ATTTATATATA AATAAATATATATAA TERM 341 166625 - 166611 - H 73 -4.4 -5.22481 | TATAAATAAATAAAA TAATTA AAA TAATTA ATATATAATTGATGA asnS 166637 - 168019 + | asparaginyl-tRNA synthetase TERM 342 168056 - 168072 + F 80 -9.5 -3.18514 | opp_overlap 168071, overlap 168054 GAGAGGTTTAAGGCG CATGCTT GGA AAGCATG TATATCTTGTATATA TERM 343 168476 - 168466 - g 70 -4 -5.16969 | GAGATAAAAAACAAA TTTG TTT CAAA TCAAAAAAACGAAAA rplU 168246 - 168560 + | 50S ribosomal subunit protein L21 TERM 344 168575 - 168565 - f 70 -4 -5.09426 | TTGAATTTTAAAAAA TATG GCT CATA AAAAAGGTGTAGGAA rpmA 168566 - 168820 + | 50S ribosomal protein L27 TERM 345 169083 - 169115 + F 71 -6.6 -4.08485 | opp_overlap 169082 ATAAAGCAAAATATT TTTTTATTTTCTCT TTCTT ACAGAAAATAAAAA TTTACTTTAAGTAAG TERM 346 169160 - 169136 - f 72 -8.7 -2.68947 | opp_overlap 169140, overlap 169135 169133 169140 169155 TTTAAGTAAGAATAG GAAAGATTGAG GTT CTAAATCTTTC TAAGAAGTTACAAGA rpsF 169323 - 169649 + | 30S ribosomal subunit protein S6 TERM 347 170101 - 170087 - g 74 -7.2 -4.04719 | overlap 170083 ATGAGAGAGGAGAAA TTCTTC CTA GAAGAA TTACAGGAACTTCTA rpsR 169660 - 170202 + | 30S ribosomal subunit protein S18 SMGWSS_172 170781 - 170371 - | hypothetical protein TERM 348 170409 - 170428 + g 78 -2.2 -6.2845 | opp_overlap 170409, overlap 170410 170415 170418 TTTTATCGAAAATTA GTTTTTTT TTAA AAAAAATC TTTTTTTTTATAATT TERM 349 170410 - 170426 + g 70 -5.3 -4.76409 | opp_overlap 170409, overlap 170409 170415 170418 TTTATCGAAAATTAG TTTTTTT TTA AAAAAAA TCTTTTTTTTTATAA TERM 350 170415 - 170441 + g 91 -5.4 -5.75478 | opp_overlap 170409, overlap 170410 170409 170418 CGAAAATTAGTTTTT TTTTAAAAAAAA TCT TTTTTTTTATAA TTTTTTTATATAATT TERM 351 170418 - 170438 + g 70 -7.1 -3.58446 | opp_overlap 170409, overlap 170410 170409 170415 AAATTAGTTTTTTTT TAAAAAAAA TCT TTTTTTTTA TAATTTTTTTATATA TERM 352 170521 - 170556 + g 86 -8.5 -4.62441 | opp_overlap 170532 170545, overlap 170522 170541 AAATTCCTTTTTCTC TTTCTTAAGAAGCTT CTTTAT AAGCTTCTTCAGAAG TTTATTTATATAAAC TERM 353 170522 - 170555 + g 79 -9.8 -3.36742 | opp_overlap 170532 170545, overlap 170521 170541 AATTCCTTTTTCTCT TTCTTAAGAAGCTT CTTTAT AAGCTTCTTCAGAA GTTTATTTATATAAA TERM 354 170898 - 170919 + r 85 -6.1 -5.54192 | opp_overlap 170897 170898 AATCCAAACTAAAAG TATAAAAAA GTAT TTTTTTATA TTTTTTTAAATTCAT SMGWSS_173 171892 - 170915 - | hypothetical protein TERM 355 170976 - 171020 + g 82 -9.1 -3.9093 | opp_overlap 170985 170988 170994 171003, overlap 170976 170979 170982 170991 TTATTATTATTATTA TTATTATAATTATTATAATTA TTA TAATTATTATAATTATTATAA TTATTATCTAATAAA TERM 356 170979 - 171011 + g 76 -8.1 -3.92963 | opp_overlap 170985 170988 170994 171003, overlap 170976 170976 170982 170991 TTATTATTATTATTA TTATAATTATTATAA TTA TTATAATTATTATAA TTATTATAATTATTA TERM 357 170982 - 171026 + g 74 -9.1 -2.82987 | opp_overlap 170985 170988 170994 171003 171021 171024, overlap 170976 170979 170976 170991 TTATTATTATTATTA TAATTATTATAATTATTATAA TTA TTATAATTATTATAATTATTA TCTAATAAATATTGA TERM 358 170991 - 171023 + g 72 -8.1 -3.55714 | opp_overlap 170988 170985 170994 171003 171021, overlap 170976 170979 170976 170982 TTATTATAATTATTA TAATTATTATAATTA TTA TAATTATTATAATTA TTATCTAATAAATAT TERM 359 171073 - 171088 + g 79 -4.8 -5.54079 | AAATTAAATGAATTT CAATTT TTTT AAATTG TTTTTTAATTTTTGA TERM 360 171439 - 171459 + g 81 -5.6 -5.14985 | TACTATTAGGATAGT TTTTTCTT AAAAA AAGAAAAA TTTTTATATATTTCA TERM 361 171804 - 171817 + g 100 -3.9 -6.95634 | overlap 171812 ATAGGATGATTCATA TTCAT TATT ATGAA TTTTTTTTTTTTTAA TERM 362 171819 - 171839 + g 71 -7.1 -3.77486 | opp_overlap 171818 171819, overlap 171812 TTCATTATTATGAAT TTTTTTTTT TTT AAAAAAAAA TTATATATTCTATTT TERM 363 171953 - 171969 + r 76 -2.4 -5.94713 | opp_overlap 171953, overlap 171954 GTTTTTAACATATTA TTATAT TCAAT ATATAA TTTTTTTTCTAAAGT dapA 172821 - 171931 - | dihydrodipicolinate synthase TERM 364 172475 - 172488 + g 76 -6.7 -4.35483 | opp_overlap 172474 AAATGATTATAAATT CCTTC TTGA GAAGG TTTATTATAATAAGG TERM 365 172745 - 172767 + g 71 -3.5 -5.4505 | opp_overlap 172737 172748 172761, overlap 172746 172764 GAGACTATCTTCTCA AGAGAAATA AAATC TATTTCTCC TTTTTTATTAAAAGG TERM 366 172746 - 172766 + g 71 -7 -3.86307 | opp_overlap 172737 172748 172761, overlap 172745 172764 AGACTATCTTCTCAA GAGAAATA AAATC TATTTCTC CTTTTTTATTAAAAG TERM 367 172764 - 172784 + g 73 -8.4 -3.16191 | opp_overlap 172761, overlap 172746 172745 AAATAAAATCTATTT CTCCTTTT TTATT AAAAGGAG TTACTAAAGCTATAC SMGWSS_175 172885 - 173088 + | hypothetical protein TERM 368 173182 - 173172 - f 73 -2.6 -5.65678 | opp_overlap 173173 173176, overlap 173165 173173 ATAAAATAGAAAAAA TTTT TTC AAAA ATTGAATTTACAAAA TERM 369 173353 - 173343 - g 82 -2.6 -6.34616 | TTAAAATAAAAAAAA TAAA TAG TTTA CAAGGAGACATAATT prfB 173285 - 173929 + | peptide chain release factor RF2 TERM 370 174099 - 174087 - g 79 -4.9 -5.4148 | opp_overlap 174076, overlap 174076 TAAAGAATTAAAAAA TTCTA ATA TAGAA ATGATCATAGAATTT dapB 173965 - 174690 + | dihydrodipicolinate reductase TERM 371 174889 - 174908 + G 81 -2.3 -6.30182 | overlap 174862 174884 TATGGTGGTCTATAT TATTATA TATTCC TATAATA TTTTTTTTTATATAC TERM 372 174998 - 174982 - g 83 -6.7 -5.06052 | GTAAAAAAGATAAAA TGTTATT ATT AATAACA TTGGGAGGGTATATT TERM 373 175144 - 175165 + G 73 -6.7 -4.24342 | gap 1, overlap 175148 AACCTTTTGTAATTC CTACTCCTTC TAT GAAGGA-TAG TTTATTAGTGGGAGA TERM 374 175148 - 175162 + G 73 -8.6 -3.12942 | overlap 175144 TTTTGTAATTCCTAC TCCTTC TAT GAAGGA TAGTTTATTAGTGGG TERM 375 175295 - 175311 + G 72 -8.1 -3.55524 | opp_overlap 175282 175281, overlap 175281 175291 ATCTTATATATCTTA TATAAGG TTA CCTTATA TTCGTTTACCTAGTT TERM 376 175546 - 175556 + G 72 -2.6 -5.75342 | AAATATTAAACCCAT TAAA TAT TTTA TTTTTTTTAAAAAAG TERM 377 175604 - 175590 - g 85 -4.4 -5.95946 | overlap 175595 GGAATAATAAAAAAA TATATT TTT AATATA AAAGAATACGAATTA TERM 378 175648 - 175625 - g 87 -7 -5.31059 | opp_overlap 175628 175635 175637, overlap 175637 ATACGAATTAAAAAA TAATATAAAA AATT TTTTATATTA TAAAAAATATATTTT TERM 379 175655 - 175637 - g 95 -6.2 -5.57729 | opp_overlap 175628 175635 175637, overlap 175625 AAATAATATAAAAAA TTTTTTAT ATT ATAAAAAA TATATTTTACCAAAA TERM 380 176075 - 176049 - g 83 -10.4 -3.06696 | GTTCGTTGGAATAGA TGTTTTACTATC ATA AATAGTAAAACA AAATTAGAAAATAAA TERM 381 176107 - 176124 + G 84 -5.7 -5.45056 | opp_overlap 176096 176093 176102 176100 176107 176110 176113 176119, overlap 176102 176100 176099 176117 ATTATATATATCATA TAATGAT AATT ATCATTA TTTATTTTTTTTTAA lepB 174717 - 176153 + | signal peptidase I TERM 382 176305 - 176295 - g 72 -2.6 -5.77734 | AAAGAAAAAGAAAAA TTTT AAC AAAA GCTAAGTATAGAGAA rpsU 176150 - 176344 + | 30S ribosomal subunit protein S21 TERM 383 176811 - 176824 + G 73 -3.9 -5.46657 | opp_overlap 176787 176785 176806 176811, overlap 176806 TTCAAGAAACCAATA TACAA AATA TTGTA TTTTTTATTCAGATA TERM 384 177039 - 177022 - g 71 -7.1 -3.77171 | opp_overlap 177021 177022 177027, overlap 177033 GGAAAAAAAAAAGGA TCCATTA TTAA TAATGGA ATTAATATGCTTTAT aroE 176356 - 177132 + | putative shikimate 5-dehydrogenase SMGWSS_181 178091 - 177108 - | GTP-binding protein lpdA 179490 - 178093 - | dihydrolipoamide dehydrogenase TERM 385 179167 - 179182 + g 79 -3.4 -5.95166 | opp_overlap 179167 TTTAGCTTCACCATA TAATAT TTTT ATATTA TTTTTTTTCATTAAA SMGWSS_184 179997 - 179620 - | hypothetical protein TERM 386 179890 - 179868 - G 70 -5 -4.91873 | overlap 179872 TATACCAAGTAAAAA TATATCTATT TCC AATAGAAATA ACATTGTCAGCAAAC TERM 387 179962 - 179978 + g 100 -2.3 -7.07835 | opp_overlap 179963, overlap 179963 TAATTCGGTTGAAGA ATTCATT AAA AATGAAA TTTTTTTTTTTTTTC TERM 388 179963 - 179977 + g 74 -5.8 -4.76465 | opp_overlap 179963, overlap 179962 AATTCGGTTGAAGAA TTCATT AAA AATGAA ATTTTTTTTTTTTTT TERM 389 181788 - 181776 - g 74 -3.5 -5.64873 | CCTAAGAATAAAAAA TTTTA TAA TAAAA CTGTAAAATTTTTAA TERM 390 181833 - 181821 - g 100 -4.9 -7.00209 | ATAAAAAAAAAAAAA CTTTT AAA AAAAG AAACTGTAGATTGGG sucA 180132 - 182846 + | 2-oxoglutarate dehydrogenase, E1 component sucB 182851 - 183996 + | 2-oxoglutarate dehydrogenase, E2 component TERM 391 184105 - 184122 + G 73 -4.3 -5.32882 | opp_overlap 184097 184105, overlap 184097 TAATTAATAAAAATT TTATATT TGAT AATATAA TTTTTTATCCTGCTA TERM 392 184248 - 184229 - g 73 -6.6 -4.22883 | opp_overlap 184213 184212 184226 184233, overlap 184211 184213 184203 184233 TATTATTCAAAATAA TAAATTGT TTGG ACAATTTA ATACTTATGTTTTTG TERM 393 184400 - 184372 - g 84 -4.1 -6.25741 | opp_overlap 184372 184378 184399 AAATAATAAAAAAAA TATATATAATATC TTT AATATTATTTATA TTAGGTTTAATATTT TERM 394 184614 - 184587 - g 83 -6.6 -5.04385 | TATATTCTTAAAAAA TTAAATATAATA AATT CATTATATTTAA AAAAATATAGGAAAC tatC 184005 - 184760 + | Sec-independent protein translocase protein TatC TERM 395 184747 - 184766 + T 88 -5.2 -5.88197 | opp_overlap 184749 GTATATTAACTTCAA TATTTTTT AATT AAAAAATA TTTTTTTCTCTTTCA smpB 185197 - 184757 - | SsrA (tmRNA)-binding protein TERM 396 184911 - 184935 + g 70 -4.5 -5.04377 | opp_overlap 184911, overlap 184915 TTTAATTTTAATTCA TTTATTTTATT ATA AATAAAATTAA TTTCTTTTCTTTTAA TERM 397 184960 - 184982 + g 73 -6.4 -4.16842 | TTTTAAGAAGAAGTT TTTTAACCCT TTT AGGATTAAAA TTTATTCCAAGTAAA TERM 398 185020 - 185001 - G 71 -6.6 -4.08651 | ATTCCAAGTAAATAA TTTGATAT ATAC ATATCAAA AACATAAATATTATT TERM 399 185448 - 185424 - g 89 -5.9 -5.47846 | opp_overlap 185424, overlap 185419 185411 AAGTAAAAAATAAAA TTTTTAACATT AAA AATGTTCAAAA TGTAGAAATTATCCT SMGWSS_190 185210 - 185527 + | hypothetical protein TERM 400 185680 - 185667 - g 79 -5.3 -5.47821 | overlap 185673 185675 ATGGATTTAAAAAAA GAGAA ATAC TTCTC TTAACAGAAGAGCAA SMGWSS_191 185576 - 185998 + | hypothetical protein groL 187768 - 186137 - | 60 kDa chaperonin GroEL groS 188055 - 187777 - | 10 kDa chaperonin GroES TERM 401 188242 - 188232 - R 76 -2.6 -5.98675 | opp_overlap 188235 188238, overlap 188235 188238 TAGAAAAATAAAAAA TATT AAT AATA AACATATTATTATAA SMGWSS_194 189654 - 188293 - | RNA modification protein TERM 402 188487 - 188505 + g 73 -6.8 -4.28383 | overlap 188486 188489 TACCAATATATTTTC TATTCCTA TAA TAGGAATG TGTTTTTTGTAAATT TERM 403 188489 - 188503 + g 70 -7.2 -3.72236 | overlap 188487 188486 CCAATATATTTTCTA TTCCTA TAA TAGGAA TGTGTTTTTTGTAAA TERM 404 188999 - 189009 + g 82 -2.6 -6.41805 | TCATTTTTTATTTCT TTTA TTT TAAA TTTTTTTTTTAATCC TERM 405 189820 - 189809 - g 76 -4.4 -5.39755 | opp_overlap 189809 TAGAATCAGAAAAAA TTCC AAAA GGAA TTAATGAAGATATTA TERM 406 190771 - 190761 - g 70 -4 -5.1675 | opp_overlap 190761 TCATTTAGGAAAAAA TACT AAA AGTA CTATTATTTCAAAAG sufB 189724 - 191148 + | FeS assembly protein SufB sufC 191168 - 191908 + | putative FeS assembly ATPase SufC TERM 407 192179 - 192211 + G 71 -5.9 -4.33417 | opp_overlap 192210, overlap 192181 TATAAATGGTTTTTA TGTTTTTAATTTTTT TAA AAAAAATAAAAAATA TTTATTATCAATAAA TERM 408 192243 - 192210 - g 83 -3.6 -6.17033 | gap 1, opp_overlap 192179 192212 192217 192242, overlap 192212 192230 AAAAAAAATAAAAAA TATTTATTATCAATA AATGA TATT-ATAATAAATA ATAAAAATTATTGTA TERM 409 192309 - 192322 + G 72 -2.5 -5.79595 | TCCAATAATGATACT TTAAA TTTA TTTAA TTTTTTATTTTCAAA TERM 410 192406 - 192386 - g 74 -7.1 -4.05788 | opp_overlap 192368 192386 192386 192386 192386 192388 192392, overlap 192368 192392 TTGTTTTAAACCAAA TATATATAT TAT ATATATATA TAATATTAATTATGA TERM 411 192637 - 192619 - g 71 -5.4 -4.68545 | overlap 192620 ATTTAAGAGATAAAA CTTTTTTG ACA CAAAAAAA AAATAGTACTTGTAG TERM 412 192663 - 192641 - g 87 -2 -6.53504 | opp_overlap 192643, overlap 192643 GACACAAAAAAAAAA TAGTACTTGT AGT ATAAGTACTT TTTCATTTGAAGGAA TERM 413 192643 - 192661 + G 83 -6.8 -4.98531 | opp_overlap 192641 192643 CACAAAAAAAAAATA GTACTTGT AGT ATAAGTAC TTTTTCATTTGAAGG sufD 191916 - 193217 + | putative FeS assembly protein SufD TERM 414 193656 - 193638 - g 95 -5.4 -6.36459 | TGTAATAAAAAAAAA GCATTATT AAA AATAATAC CCATAGATTATGATG TERM 415 193983 - 193960 - g 71 -8.2 -3.28765 | overlap 193962 AGATTTTAAATCTAA TACCACCATA TAAA TATGGTGGTG AAATGATAGATAAAG TERM 416 193981 - 193962 - g 85 -10.8 -3.20617 | overlap 193960 ATTTTAAATCTAATA CCACCATA TAAA TATGGTGG TGAAATGATAGATAA sufS 193221 - 194447 + | cysteine desulphurase, SufS TERM 417 194540 - 194524 - g 75 -5.9 -4.62904 | opp_overlap 194524, overlap 194512 194534 AAAGATCCTGAAAAA GATCTTA AAC CAAGATC TCCTGTTGTTACTAT TERM 418 194681 - 194693 + G 73 -4.9 -5.08824 | opp_overlap 194681 TTAAATTTAAAAAAG GTAAT AGT ATTAC TTTTTTAGATACCCC TERM 419 195335 - 195316 - g 87 -7.2 -5.18355 | TTTAAAAATGAAAAA GAAGCTAA ACAA TTAGCCTC AATAAGGAGTAAATT TERM 420 195779 - 195765 - g 71 -5.8 -4.56978 | opp_overlap 195754 TGCTGAAATAATAAA TTTCTT TAA AAGAAA GCAAATAGGAACTAT infB 194458 - 196005 + | translation initiation factor IF-2 SMGWSS_200 197079 - 196009 - | putative phospho-2-dehydro-3-deoxyheptonate aldolase (aroG)/chorismate mutase (pheA) TERM 421 196165 - 196175 + g 79 -2.6 -6.22691 | opp_overlap 196165 AGGTTGAAAAACTAC TAAA TTG TTTA TTTTTTTTATTATTG pheA 197918 - 197097 - | putative prephenate dehydratase TERM 422 197337 - 197353 + gr 88 -5.2 -5.90231 | opp_overlap 197328 197326 197336 AAAATAGAAAGAAGC TTTCTC AAAAA GAGAAA TTTTTTTATATTTAT TERM 423 197522 - 197512 - GR 74 -5.4 -4.78848 | opp_overlap 197512 197515 197516, overlap 197515 TTTTTAAATATAAAA GAAG CGG CTTC TGCTGTATCTACATA TERM 424 197549 - 197574 + gr 95 -9.3 -4.78752 | CATATTCAGATATTT TTATATTTCTA TATT TAGAAATATAA TTTTTACATTGTAAT asd 198894 - 197872 - | aspartate semialdehyde dehydrogenase TERM 425 198260 - 198275 + gr 85 -3.4 -6.25578 | overlap 198270 GCGGTAATTCTTATA TTTTTA TCAT TAAAAA TTTTTTTTGTTTCAT TERM 426 198692 - 198675 - GR 75 -8.5 -3.53811 | CCCATTTTTTTGAAA TTTCTGC ACCA GCAGAAA AAATAGCTATATCAG TERM 427 198727 - 198740 + gr 70 -3.9 -5.14525 | TAAAGAAATTACTTC TTCTA TACT TAGAA TTTTATATTTTTTTT TERM 428 198749 - 198767 + gr 100 -6.2 -5.81032 | CTTAGAATTTTATAT TTTTTTTT TCT AAAAAAAA TTTTTTTTCCAATTG rpsT 199166 - 198927 - | 30S ribosomal subunit protein S20 aroA 200497 - 199256 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 429 199985 - 200001 + g 70 -5.3 -4.79667 | opp_overlap 199985 AGAGATAGAAGTAAT TTTATTT GAT AAATAAA TTTTTAATCCATTTT TERM 430 200120 - 200132 + g 87 -3.4 -6.41805 | overlap 200111 ACCTATTATTCTCAA TGGA GGATA TCCA TTTTTTTTTTCATAA rpsP 200855 - 200517 - | 30S ribosomal subunit protein S16 gyrB 202850 - 200973 - | DNA gyrase B subunit TERM 431 201979 - 202003 + g 73 -4.5 -5.16071 | opp_overlap 201973, overlap 201977 201980 TTTTTAAACCTTCTA TTTTTAGAAAA ATA TTTTTTAAAAG TTTTTGTTAATGCTT TERM 432 202132 - 202161 + g 71 -6.8 -4.01115 | opp_overlap 202130, overlap 202130 AATTCTAAATTTATA TTTTTTTTATTT TTTTTT AAATAAAAAAAA TCTTTTATTCTAGAT TERM 433 202283 - 202264 - G 71 -2.2 -5.75342 | opp_overlap 202247 202264, overlap 202265 TTTTTTGAAAAAAAA TGATTTTT TTTA AAAAATCC AGTTTTATAAATTTT gidB 203611 - 202973 - | glucose-inhibited division protein B TERM 434 203141 - 203156 + g 76 -3.4 -5.82316 | opp_overlap 203150 ATTAATTTTATTTTT TTTTTT AAAT AAAAAA TTTTTTTTAACTAAT TERM 435 203483 - 203508 + g 74 -2.9 -5.7946 | gap 1, opp_overlap 203483 203488, overlap 203488 TTCATAAAAAAAATT TAAACTATTATT AGA AATAATA-TTTA TTTTTTTATTAAAAA TERM 436 203488 - 203504 + g 79 -5.3 -5.33131 | opp_overlap 203488 203483, overlap 203483 AAAAAAAATTTAAAC TATTATT AGA AATAATA TTTATTTTTTTATTA aspC 203679 - 204836 + | putative aspartate aminotransferase TERM 437 204839 - 204825 - f 76 -4.4 -5.3671 | opp_overlap 204825 AATAGAATTAAAAAA TTATTA AAA TAATAA TAAATTATAGATTAA TERM 438 205037 - 205025 - g 74 -3.5 -5.52384 | TTGGTATGAAAAAAA TTTAT TTT ATAAA GGCAAATTATTATTT rpmF 204882 - 205157 + | 50S ribosomal subunit protein L32 acoB 206131 - 205154 - | putative pyruvate dehydrogenase E1 component, beta subunit TERM 439 205333 - 205314 - G 84 -9.4 -3.83318 | TGTTGAATAACATAA GCTATTTC AGAA GAAATAGC AGCAAATGGCCAAGA TERM 440 206168 - 206142 - R 82 -5.4 -5.54907 | opp_overlap 206143 206145, overlap 206165 TTCATAAAAGAAAAA TTTGTTTTTTTT TTA AAAAAAAATAAA CTATATTAATAGTAT TERM 441 206184 - 206165 - R 79 -2.2 -6.06723 | opp_overlap 206145 206143, overlap 206142 206169 TTTTTTAAAAAAAAA TAAACTAT ATTA ATAGTATA AGTATAATTTAATTA TERM 442 206567 - 206527 - R 79 -8.3 -4.18506 | opp_overlap 206532 206540, overlap 206536 206562 TTATTTTTAAAATAA CTTATGTAAGTAGGTAGCG TAA CGCTACTTACATACTTATG TAAGTAGGTAGCGTA TERM 443 206532 - 206562 + r 100 -13.4 -3.524 | opp_overlap 206527 206536, overlap 206540 TTTAAAATAACTTAT GTAAGTAGGTAGCG TAA CGCTACTTACATAC TTATGTAAGTAGGTA TERM 444 206593 - 206536 - R 100 -20.1 -3.12021 | opp_overlap 206532 206540 206567 206575, overlap 206527 206562 206571 206574 AAATAACTTATGTAA GTAGGTAGCGTAACGCTACTTACATAC TTAT GTAAGTAGGTAGCGTAACGCTACTTAC ATACTTATGTAAGTA TERM 445 206540 - 206589 + r 100 -21.7 -3.15677 | opp_overlap 206527 206536 206562 206571 206574, overlap 206532 206567 206575 AACTTATGTAAGTAG GTAGCGTAACGCTACTTACATAC TTAT GTAAGTAGGTAGCGTAACGCTAC TTACATACTTATGTA TERM 446 206567 - 206597 + r 100 -13.4 -3.524 | opp_overlap 206536 206562 206571 206574, overlap 206540 206575 TACTTACATACTTAT GTAAGTAGGTAGCG TAA CGCTACTTACATAC TTATGTAAGTAGGTA TERM 447 206628 - 206571 - R 100 -14.3 -3.09491 | opp_overlap 206540 206567 206575 206610, overlap 206536 206562 206574 206606 206609 TACATACTTATGTAA GTAGGTAGCGTAACGCTACTTACATAC TTAT GTAAGTAGGTAGCGTAACGCTACTTAT GTAAGTAGGTAGCGT TERM 448 206625 - 206574 - R 100 -16 -2.75891 | opp_overlap 206540 206567 206575 206610, overlap 206536 206562 206571 206606 206609 ATACTTATGTAAGTA GGTAGCGTAACGCTACTTACATAC TTAT GTAAGTAGGTAGCGTAACGCTACT TATGTAAGTAGGTAG TERM 449 206575 - 206624 + r 100 -21.7 -3.524 | opp_overlap 206536 206562 206574 206571 206606 206609, overlap 206540 206567 206610 TACTTATGTAAGTAG GTAGCGTAACGCTACTTACATAC TTAT GTAAGTAGGTAGCGTAACGCTAC TTATGTAAGTAGGTA TERM 450 206655 - 206606 - R 78 -9.4 -3.09491 | opp_overlap 206575 206610 206637, overlap 206574 206571 206609 206633 206636 TACATACTTATGTAA GTAGGTAGCGTAACGCTACTTA TGTAAG TAGGTAGCGTAACGCTACTTAT GTAAGTAGGTAGCGT TERM 451 206652 - 206609 - R 83 -11.1 -2.75891 | opp_overlap 206575 206610 206637, overlap 206574 206571 206606 206633 206636 ATACTTATGTAAGTA GGTAGCGTAACGCTACTTA TGTAAG TAGGTAGCGTAACGCTACT TATGTAAGTAGGTAG TERM 452 206610 - 206651 + r 100 -17.5 -3.524 | opp_overlap 206574 206571 206609 206606 206633 206636, overlap 206575 206637 TACTTATGTAAGTAG GTAGCGTAACGCTACTTAT GTAA GTAGGTAGCGTAACGCTAC TTATGTAAGTAGGTA TERM 453 206682 - 206633 - R 78 -9.4 -3.07935 | opp_overlap 206610 206637 206664, overlap 206609 206606 206636 206660 206663 ACGCTACTTATGTAA GTAGGTAGCGTAACGCTACTTA TGTAAG TAGGTAGCGTAACGCTACTTAT GTAAGTAGGTAGCGT TERM 454 206679 - 206636 - R 83 -11.1 -2.75712 | opp_overlap 206610 206637 206664, overlap 206609 206606 206633 206660 206663 CTACTTATGTAAGTA GGTAGCGTAACGCTACTTA TGTAAG TAGGTAGCGTAACGCTACT TATGTAAGTAGGTAG TERM 455 206637 - 206678 + r 100 -17.5 -3.524 | opp_overlap 206609 206606 206636 206633 206660 206663, overlap 206610 206664 TACTTATGTAAGTAG GTAGCGTAACGCTACTTAT GTAA GTAGGTAGCGTAACGCTAC TTATGTAAGTAGGTA TERM 456 206709 - 206660 - R 78 -9.4 -3.07935 | opp_overlap 206637 206664 206691, overlap 206636 206633 206663 206687 206690 ACGCTACTTATGTAA GTAGGTAGCGTAACGCTACTTA TGTAAG TAGGTAGCGTAACGCTACTTAT GTAAGTAGGTAGCGT TERM 457 206706 - 206663 - R 83 -11.1 -2.75712 | opp_overlap 206637 206664 206691, overlap 206636 206633 206660 206687 206690 CTACTTATGTAAGTA GGTAGCGTAACGCTACTTA TGTAAG TAGGTAGCGTAACGCTACT TATGTAAGTAGGTAG TERM 458 206664 - 206705 + r 100 -17.5 -3.524 | opp_overlap 206636 206633 206663 206660 206687 206690, overlap 206637 206691 TACTTATGTAAGTAG GTAGCGTAACGCTACTTAT GTAA GTAGGTAGCGTAACGCTAC TTATGTAAGTAGGTA TERM 459 206736 - 206687 - R 78 -9.4 -3.07935 | opp_overlap 206664 206691 206710, overlap 206663 206660 206690 206714 ACGCTACTTATGTAA GTAGGTAGCGTAACGCTACTTA TGTAAG TAGGTAGCGTAACGCTACTTAT GTAAGTAGGTAGCGT TERM 460 206733 - 206690 - R 83 -11.1 -2.75712 | opp_overlap 206664 206691 206710, overlap 206663 206660 206687 206714 CTACTTATGTAAGTA GGTAGCGTAACGCTACTTA TGTAAG TAGGTAGCGTAACGCTACT TATGTAAGTAGGTAG TERM 461 206691 - 206732 + r 100 -17.5 -3.524 | opp_overlap 206663 206660 206690 206687 206714, overlap 206664 206710 TACTTATGTAAGTAG GTAGCGTAACGCTACTTAT GTAA GTAGGTAGCGTAACGCTAC TTATGTAAGTAGGTA TERM 462 206710 - 206767 + r 100 -20.9 -3.524 | opp_overlap 206690 206687 206714 206741, overlap 206691 206745 206756 206757 206759 CGTAACGCTACTTAT GTAAGTAGGTAGCGTAACGCTACTTAT GTAA GTAGGTAGCGTAACGCTACTTACATAC TTATGTAAGTAGGTA TERM 463 206763 - 206714 - R 100 -15.2 -3.07935 | opp_overlap 206691 206710 206745 206756 206757 206759, overlap 206690 206687 206741 ACGCTACTTATGTAA GTAGGTAGCGTAACGCTACTTA TGTAAG TAGGTAGCGTAACGCTACTTAC ATACTTATGTAAGTA TERM 464 206798 - 206741 - R 100 -20.1 -3.07935 | opp_overlap 206710 206745 206756 206757 206759, overlap 206714 206776 ACGCTACTTATGTAA GTAGGTAGCGTAACGCTACTTACATAC TTAT GTAAGTAGGTAGCGTAACGCTACTTAC ATAAGTATGATAGTA TERM 465 206745 - 206794 + r 100 -21.7 -3.09193 | opp_overlap 206714 206741 206776, overlap 206710 206756 206757 206759 TACTTATGTAAGTAG GTAGCGTAACGCTACTTACATAC TTAT GTAAGTAGGTAGCGTAACGCTAC TTACATAAGTATGAT TERM 466 206756 - 206814 + r 90 -10 -3.81557 | gap 1, opp_overlap 206714 206741 206776, overlap 206710 206745 206757 206759 GTAGGTAGCGTAACG CTACTTACATACTTATGTAAGTAG-GT AGCGTA ACGCTACTTACATAAGTATGATAGTAA TATTTCTTTACGAGA TERM 467 206757 - 206813 + r 93 -13.5 -2.88452 | gap 1, opp_overlap 206714 206741 206776, overlap 206710 206745 206756 206759 TAGGTAGCGTAACGC TACTTACATACTTATGTAAGTAG-GT AGCGTA ACGCTACTTACATAAGTATGATAGTA ATATTTCTTTACGAG TERM 468 206759 - 206811 + r 90 -11.7 -2.98607 | gap 1, opp_overlap 206714 206741 206776, overlap 206710 206745 206757 206756 GGTAGCGTAACGCTA CTTACATACTTATGTAAGTAG-GT AGCGTA ACGCTACTTACATAAGTATGATAG TAATATTTCTTTACG TERM 469 206798 - 206776 - R 85 -10.6 -3.09491 | opp_overlap 206745 206759 206757 206756, overlap 206741 TACATACTTATGTAA GTAGGTAGCG TAA CGCTACTTAC ATAAGTATGATAGTA rpoD 207846 - 206791 - | RNA polymerase sigma factor rpoD TERM 470 206967 - 206981 + g 74 -7.2 -3.98236 | TAATTATTTGAGATT CTCTTT CTG AAAGAG TTTCTAATAAGATTT pnp 210029 - 207843 - | polynucleotide phosphorylase/polyadenylase TERM 471 207891 - 207881 - G 70 -4 -5.30686 | opp_overlap 207886 AATATCGAGAAAAAA TCAT TTT ATGA GATAATTTAATTTTT TERM 472 208102 - 208082 - G 93 -11.3 -3.87815 | opp_overlap 208089 CTTTAGCTTTATAAA TTGTTCCTA CTT TAGGAACAA AAGTAATGTTTTTTA TERM 473 209102 - 209120 + g 79 -4.7 -5.66926 | opp_overlap 209093 TATTAATTACAATGC TTTCATT ATAAA AATGAAA TTTTATTTTTTTTAA TERM 474 209221 - 209189 - G 72 -8.7 -2.90486 | opp_overlap 209185 209183 209189 209196 209198, overlap 209194 AACAACTTTTATAGA TATAATCTATCTCTT CAT AAGAGATAAATTTTA TTTTTTCTTTTATAT TERM 475 209189 - 209221 + g 100 -6.5 -5.8901 | opp_overlap 209189 209194, overlap 209185 209183 209196 209198 AACAACTTTTATAGA TATAATCTATCTCTT CAT AAGAGATAAATTTTA TTTTTTCTTTTATAT TERM 476 209216 - 209194 - G 77 -8.6 -3.64198 | opp_overlap 209185 209183 209189 209196 209198, overlap 209189 CTTTTATAGATATAA TCTATCTCTT CAT AAGAGATAAA TTTTATTTTTTCTTT TERM 477 209196 - 209214 + g 74 -9 -2.89944 | opp_overlap 209194 209189, overlap 209185 209183 209189 209198 TTTATAGATATAATC TATCTCTT CAT AAGAGATA AATTTTATTTTTTCT TERM 478 209278 - 209300 + g 87 -3.6 -6.48081 | opp_overlap 209278 TATTTATAATAATAA TTATACAA TTCAATT TTGTATAA TTTTTTTTTTATAAA TERM 479 209580 - 209544 - G 76 -6.7 -4.49316 | opp_overlap 209552 209554, overlap 209555 209570 AGGATTAATAATAAA TGCATCATTAATTCGTA TTA TACGAACTGTTGATACA GGCCCCTGAAAAGAT rpsO 210281 - 210045 - | 30S ribosomal subunit protein S15 TERM 480 210244 - 210254 + g 82 -2.6 -6.4753 | opp_overlap 210238, overlap 210238 GATAATCCATAATTT TTAA TTA TTAA TTTTTTTTTATTTGA ubiE 211019 - 210291 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 481 210328 - 210362 + g 100 -6.8 -5.54894 | opp_overlap 210342 210358, overlap 210358 GATACAATACCATGA TTTAACTTTAAAAGTT TAA AATTTTTAAAATTAAA TTTTTTTAATAAATT TERM 482 210525 - 210514 - G 79 -4.4 -5.52986 | opp_overlap 210518 210520 ATTTTATTAAAAAAA TCCT TATT AGGA TTAGAAAATTCTAAT TERM 483 210550 - 210534 - G 76 -6.7 -4.49311 | opp_overlap 210520 210518 210534 ATTAGGATTAGAAAA TTCTAAT ATC ATTAGAA TTCCATTATAGTTTA TERM 484 210650 - 210667 + g 77 -5.7 -5.03314 | opp_overlap 210649 CAATATCAAATTTAT TTTTCTT TATA AAGAAAA TTTTTTGACAATCAG TERM 485 210759 - 210783 + g 82 -2.9 -6.25578 | opp_overlap 210761, overlap 210761 AATCATATATTTAGA AATATCTAATC CTA GAATAGATATA TTTTTTTTATTTGCT TERM 486 210761 - 210781 + g 74 -5.5 -4.74858 | opp_overlap 210761, overlap 210759 TCATATATTTAGAAA TATCTAATC CTA GAATAGATA TATTTTTTTTATTTG rpmE 211120 - 211317 + | 50S ribosomal subunit protein L31 rpsL 211388 - 211783 + | 30S ribosomal protein S12 TERM 487 211898 - 211886 - g 79 -4.9 -5.46629 | AAGATGGTAAAAAAA CTATA GCT TATAG GATATTTTATAATTG rpsG 211780 - 212244 + | 30S ribosomal protein S7 fusA 212258 - 214339 + | elongation factor G rpsJ 214359 - 214646 + | 30S ribosomal subunit protein S10 rplC 214652 - 215272 + | 50S ribosomal subunit protein L3 TERM 488 215815 - 215851 + G 76 -4.8 -5.41143 | gap 1, opp_overlap 215816, overlap 215816 TTATCAATTAATGAA TTAAATAGTTATGAATT AGCA AATTCA-GACTATTTAG TTTTTTTCGAAAGTG rplD 215269 - 215892 + | 50S ribosomal subunit protein L4 TERM 489 216048 - 216038 - g 78 -4 -5.83822 | overlap 216046 216047 TATATTTAAAAAAAA TAGT AAA ACTA ACTTTAAAGTTAAAT SMGWSS_224 215895 - 216125 + | hypothetical protein TERM 490 216162 - 216132 - g 79 -3.4 -6.09888 | overlap 216133 216139 TGTCAATAAAAAAAA CTAAACCTATAACT TCT AGTCAAAGATTTAA AGTTATAAATACATT rplB 216116 - 216931 + | 50S ribosomal protein L2 TERM 491 217006 - 216994 - g 83 -3.5 -6.15536 | opp_overlap 216994 AATTAATAAAAAAAA TTATT TTA AATAA TTTGAACTTAAAAAA rpsS 216939 - 217220 + | 30S ribosomal subunit protein S19 rplV 217228 - 217632 + | 50S ribosomal subunit protein L22 TERM 492 217927 - 217908 - g 71 -2.2 -5.76633 | overlap 217883 217918 TTATATATAAAAAAA TTCAAATA AATA TTTTTGAA ATAAAAAAACCAGAA rpsC 217622 - 218302 + | 30S ribosomal subunit protein S3 TERM 493 218471 - 218487 + G 87 -10.9 -3.48276 | CAAATAGAGTCTGCT CGTGTTG CTG CAACACG TTATATGAAAAGACA rplP 218321 - 218731 + | 50S ribosomal protein L16 TERM 494 218883 - 218859 - g 100 -11.7 -6.95634 | opp_overlap 218859 TTAAAAAAAAAAAAA TATTATGTTCA TGA TGAACATAATA TTTCAAATGAAGGTG TERM 495 218859 - 218883 + G 91 -11.7 -3.60296 | opp_overlap 218859 TTAAAAAAAAAAAAA TATTATGTTCA TGA TGAACATAATA TTTCAAATGAAGGTG rpsQ 218724 - 218978 + | 30S ribosomal subunit protein S17 rplN 218982 - 219344 + | 50S ribosomal subunit protein L14 TERM 496 219681 - 219668 - g 87 -2.5 -6.53504 | TATATAAAAAAAAAA TAATT AATA AATTA ATAGAAAAATTTAAT rplE 219625 - 220185 + | 50S ribosomal subunit protein L5 rpsN 220178 - 220447 + | 30S ribosomal subunit protein S14 rpsH 220450 - 220851 + | 30S ribosomal subunit protein S8 TERM 497 220870 - 220858 - f 90 -6.3 -5.86965 | ATTTATTAAAAAAAA TAGAC TAT GTCTA GAATTGGTAATATTC TERM 498 220986 - 221014 + G 72 -7.8 -3.61398 | opp_overlap 220989 221004, overlap 220983 AATTATAGGTGATAT TAATATTATTAT AAATA ATAATAATATTA TTGTTAAAAGAAAAC rplF 220864 - 221412 + | 50S ribosomal subunit protein L6 TERM 499 221448 - 221437 - g 85 -3 -6.43839 | ATATTAAAAAAAAAA TCTA TAAT TAGA AAAAAAATATTTGGT TERM 500 221480 - 221458 - g 77 -6.4 -4.6341 | opp_overlap 221457 221456, overlap 221459 ATTAGAAAAAAAATA TTTGGTTTTT TAG AAAAACCAAG AGTTTCAATATTTAG TERM 501 221479 - 221459 - g 81 -9.9 -3.35606 | opp_overlap 221457 221456, overlap 221458 TTAGAAAAAAAATAT TTGGTTTTT TAG AAAAACCAA GAGTTTCAATATTTA TERM 502 221646 - 221636 - g 71 -5.4 -4.59027 | opp_overlap 221636 AATTATCATATAAAA TAGG AAA CCTA TTAGGTAATATAATT rplR 221419 - 221769 + | 50S ribosomal subunit protein L18 rpsE 221782 - 222297 + | 30S ribosomal subunit protein S5 TERM 503 222585 - 222567 - g 78 -9 -3.41569 | opp_overlap 222570, overlap 222570 222581 AATATAGATACAATA CAAGATTT AAT AAATCTTG GTAAGATAAAAAAAA rplO 222330 - 222749 + | 50S ribosomal subunit protein L15 TERM 504 223130 - 223103 - g 84 -9.4 -3.86322 | opp_overlap 223104 AATAATATTACTAAA GTATTAACGATA TTAA TATCATTAATAC AAGCTCCTGTGTATA TERM 505 223507 - 223491 - g 100 -6.7 -5.75945 | ATTTTGTAAAAAAAA TACATAT ACA ATATGTA AATAAATTTTATTTA TERM 506 223818 - 223833 + G 81 -4 -6.06723 | TTCCAAATAGAAAAC CAGGTA AAGA TACTTG TTTTTTTTTAAAAAA TERM 507 223861 - 223851 - g 78 -4 -5.75342 | opp_overlap 223851 TTTTTTTAAAAAAAA TTGT ATC ACAA ATATATTTGACGGGA secY 222752 - 224053 + | preprotein translocase SecY subunit TERM 508 224124 - 224109 - g 71 -6.2 -4.33153 | opp_overlap 224108 224109, overlap 224101 224111 TGGAATAGTAATAAA TGCATT ACCT AATGCA ATGTTTAAAGTAGAA infA 224065 - 224280 + | translation initiation factor IF-1 rpmJ 224282 - 224398 + | 50S ribosomal subunit protein L36 rpsM 224398 - 224778 + | 30S ribosomal subunit protein S13 rpsK 224779 - 225165 + | 30S ribosomal subunit protein S11 TERM 509 225607 - 225593 - g 71 -5.8 -4.59027 | opp_overlap 225584 AACCAGGAGATAAAA TTTCTT TAA AAGAAA AACATAAACATAAAG rpsD 225178 - 225765 + | 30S ribosomal subunit protein S4 rpoA 225798 - 226517 + | DNA-directed RNA polymerase, alpha subunit TERM 510 226572 - 226594 + G 72 -7.9 -3.41053 | ATCGAATATGGCTTT TTCTCTTAT AAAGA ATAAGAGAA TTATGACTACTTTAG rplQ 226495 - 226893 + | 50S ribosomal subunit protein L17 dapF 227645 - 226860 - | diaminopimelate epimerase TERM 511 227188 - 227205 + g 70 -4.3 -5.27206 | ATTTTTATACCTTTA TTATATA CATT TATATAA TTTTTATTATCTATA TERM 512 227620 - 227638 + g 75 -6.2 -4.66395 | TCATTTCCTGTTGCT TTATATTT TAA AAATATAA TTTTCATATTTTTTT TERM 513 228205 - 228182 - g 91 -4 -6.53504 | opp_overlap 228186 228197 228198, overlap 228186 CATAGAAAAAAAAAA TATATCAAAT CTAC ATTTGATCTA ATCAAGATTTTAAAT TERM 514 228257 - 228245 - g 74 -3.5 -5.57765 | opp_overlap 228245 AAAAAAAAAAATAAA TTTTT ATC AAAAA TATTTCAATCTCTTC TERM 515 228515 - 228492 - g 84 -9.8 -3.85879 | TAGAACCTAGAATAA TTTTTTCTTC TAAA GAAGAAAAAA AAGAAAATAACAGAT mraW 227669 - 228571 + | S-adenosyl-methyltransferase MraW TERM 516 228580 - 228567 - T 80 -2.5 -6.09133 | TAGCGGAAAAAAAAA TATAA CTTA TTATA AATATAAAAACAGAC putA 230164 - 228923 - | putative delta-1-pyrroline-5-carboxylate dehydrogenase TERM 517 230353 - 230331 - g 70 -8 -3.03792 | opp_overlap 230322 230331 230332 230332 230334 230341, overlap 230330 230338 ATTATTTATATAAAT TTATATATAT TAT ATATATATAA TACTATAGGTATATA SMGWSS_250 230211 - 230399 + | hypothetical protein TERM 518 230604 - 230614 + T 70 -4 -5.25805 | ATCCATTTATATTTT TCAT TAA ATGA TTTTTTAAATTTATT mutL 231731 - 230628 - | putative DNA mismatch repair protein MutL TERM 519 231307 - 231327 + g 84 -9.8 -4.06527 | overlap 231303 ATGCTACACCCTTTA TCCATTGC AATTG GCAATGGA TTATATTTTAATTTT TERM 520 232077 - 232067 - g 71 -5.4 -4.7268 | AAATAGGTAAGAAAA TCCA TAG TGGA AGATCTAGAAATGAT argH 231763 - 233103 + | argininosuccinate lyase acoA 233236 - 234234 + | pyruvate dehydrogenase E1 component, alpha subunit TERM 521 234918 - 234896 - g 70 -4.2 -5.19275 | overlap 234908 AGCTATAAAAGAAAA TCCAAAAATA AAT TCTTCTTGGA CAGAAAAAAGTATAT TERM 522 234938 - 234928 - g 73 -4 -5.36441 | opp_overlap 234933, overlap 234929 234931 CTTGGACAGAAAAAA GTAT ATT ATAC CATAATAATATAAAT aceF 234246 - 235361 + | dihydrolipoamide acyltransferase E2 component SMGWSS_256 236063 - 235344 - | TerC family integral membrane protein TERM 523 236198 - 236180 - H 81 -7.6 -4.51378 | ATTTATATTATAAAA TATAACTT AAA AAGTTATA TGAATATAGCGTAAT TERM 524 237160 - 237146 - g 79 -7.2 -4.38141 | overlap 237143 TTGGAGATAAAAGAA CATCAA TAT TTGATG CCAACGCAAGTATTA gapA 236272 - 237276 + | glyceraldehyde 3-phosphate dehydrogenase SMGWSS_258 237710 - 237285 - | hypothetical protein TERM 525 237360 - 237317 - G 72 -2.8 -5.86061 | opp_overlap 237317 237320 237323, overlap 237320 TTTCATTAAAAAAAA TAATAATATTATTTTTAATA TCAA TTTTAAAAATGATATTATTT ATCCAATTAGTTATT TERM 526 237357 - 237320 - G 70 -4.5 -4.99643 | opp_overlap 237317 237320 237323, overlap 237317 CATTAAAAAAAATAA TAATATTATTTTTAATA TCAA TTTTAAAAATGATATTA TTTATCCAATTAGTT TERM 527 237405 - 237385 - G 76 -4.9 -5.1861 | opp_overlap 237370 237385 237389 237395, overlap 237370 GTTATTATTAAAAAA TAACTTTTA ATA TAAAAATTA TATCTCATAATTTGA TERM 528 237911 - 237889 - g 76 -3.6 -5.88565 | opp_overlap 237878, overlap 237893 TTCATAATAAAAAAA TTTATTAATT TTA AATTAAAAAA AATAATAAAATTTTC TERM 529 237955 - 237941 - g 76 -3.6 -5.81412 | CTTATTTAAAAAAAA TTCCAA TTT TTGAAA GATTTAATTTTAAAA trmH 237799 - 238518 + | putative tRNA:rRNA methyltransferase pheS 239499 - 238522 - | phenylalanyl-tRNA synthetase alpha subunit TERM 530 238669 - 238640 - G 75 -5.9 -4.71222 | opp_overlap 238640 238641 238642, overlap 238641 238642 ATACCAAAAGCAAAA CCTGAATATAGAT CAGG ATCTATATTCACA TTTTTTAAAACAATA TERM 531 238641 - 238668 + g 70 -7.2 -3.60316 | opp_overlap 238640 238641 238642, overlap 238640 238642 TACCAAAAGCAAAAC CTGAATATAGAT CAGG ATCTATATTCAC ATTTTTTAAAACAAT TERM 532 238667 - 238642 - G 83 -10.7 -2.63579 | opp_overlap 238641 238640 238642, overlap 238641 238640 ACCAAAAGCAAAACC TGAATATAGAT CAGG ATCTATATTCA CATTTTTTAAAACAA TERM 533 238642 - 238667 + g 83 -10.7 -2.75708 | opp_overlap 238642 238641 238640, overlap 238641 238640 ACCAAAAGCAAAACC TGAATATAGAT CAGG ATCTATATTCA CATTTTTTAAAACAA TERM 534 238823 - 238811 - G 74 -3.5 -5.53991 | opp_overlap 238811 GATTTACCAAAAAAA TTTTT AAT AAAAA AATTAATAGTAGATT TERM 535 239025 - 239047 + g 79 -9.4 -3.24118 | opp_overlap 239024, overlap 239014 239023 TTCTTAATAATTTAT TACTTTTTTT TAT AAAAAAAGTA TCTTGCATTTCTCTA TERM 536 239364 - 239393 + g 93 -11.1 -3.94773 | opp_overlap 239361 239371 239380 239384, overlap 239384 CATTAGAATCAATTT TTTTAAATTCTTT AAAT AAAGAATTTAAAA TTCCTTTTTTACCTA TERM 537 239434 - 239446 + g 71 -6.3 -4.29327 | opp_overlap 239430 TCTAAAAAATTCTAA TTCTG AAG CAGAA TTTATATTAATTATA ilvA 240774 - 239509 - | threonine dehydratase TERM 538 239643 - 239654 + g 76 -4.4 -5.46629 | overlap 239641 TTACAGCTGGACCTT CTTC TTTA GAAG TTTTTTTAGAATATT TERM 539 239779 - 239789 + g 77 -5.4 -5.0809 | TTTTAATCCTTTATA GATC AAA GATC TTTTTCTAATTTCTT TERM 540 239982 - 240000 + g 86 -7.6 -5.04987 | opp_overlap 239981 239982 239995, overlap 239977 TTCCTTCATGTAAAG GTTTTATA TCA TATAAAAC TTTTTTACAAATATT TERM 541 240038 - 240060 + g 73 -6.4 -4.28389 | AATAATCCTACTTTT TTTACAGATG CAC CATCTATAAA TTTATCTATATTTTT ilvC 241883 - 240849 - | ketol-acid reductoisomerase TERM 542 241875 - 241889 + g 76 -4.4 -5.49568 | opp_overlap 241887, overlap 241887 TATATTTCCAAATTT TAATTT CAT AAATTA TTTTTATTTTAAATT TERM 543 241892 - 241915 + r 80 -2.6 -6.13503 | opp_overlap 241887 241903, overlap 241887 ATTTCATAAATTATT TTTATTTTAA ATTA TAAAAATAAA TTTTTTTTATTCCTA ilvN 242144 - 241893 - | putative acetolactate synthase small subunit ilvB 243849 - 242149 - | putative acetolactate synthase large subunit TERM 544 243284 - 243300 + g 81 -6.7 -4.88786 | overlap 243291 CTTTTTCGATTTATA CTTTTTT TAT AAAAAAG TTTATTTATTTTAAT ilvD 245525 - 243849 - | dihydroxy-acid dehydratase TERM 545 243936 - 243949 + g 89 -4.5 -6.18768 | overlap 243931 ATTTACTTTACCTCG CACTC GCAA GGGTG TTTTTTTTCTATTTT TERM 546 244725 - 244746 + g 71 -3.7 -5.33866 | TGTTGATCCTCCTAA TGCTATTGC TAGA GTTATAGCA TTTTTTATAGATTTA