TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.669717 %AT, 847479 nt, 5534 terms. Intergenic: 0.753581 %AT, H2T: 104277 nt, 865 terms; T2T: 50978 nt, 935 terms; H2H: 40249 nt, 723 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|148244169|ref|NC_009465.1| Candidatus Vesicomyosocius okutanii HA, complete genome (length 1022154) dnaA 1 - 1293 + | chromosomal replication initiator protein DnaA dnaN 1507 - 2610 + | DNA polymerase III beta subunit TERM 1 3570 - 3559 - g 72 -5.8 -4.42062 | opp_overlap 3559, overlap 3547 TATCCCTCAAAGAAA TGGG GGTT CCCA TTTAGCTGGATTTAG TERM 2 3887 - 3852 - g 79 -4 -5.55664 | TTATTATTAAAAAAA TTTTAGATGCTTCACG TGCA CGTAATGCAGCTAGAA AAGCAAGAGAAATAA gyrB 2711 - 5128 + | DNA gyrase subunit B GyrB TERM 3 5999 - 6040 + G 86 -10.6 -3.52787 | opp_overlap 5996 5994 5993 6029 6032, overlap 6032 CAATGGAAATTATTC TATATCCTATTATTAAAA AAATGA TTTAAATAATAGGATATA TTATACTATTAACTA prkB 5149 - 6027 + | phosphoribulokinase leuS 8531 - 6084 - | leucyl-tRNA synthetase TERM 4 8434 - 8465 + g 95 -5.5 -6.23545 | gap 1 AGGCAATAATATTTT TCTTTTGAA-TAAT CCTCT ATTACTTCAAAAGA TTTTTTTTCTTTCCA pyrD 9505 - 8528 - | dihydroorotase dehydrogenase TERM 5 8874 - 8884 + g 82 -5.4 -5.33848 | CCACCTTGATTGTTA CCAA TGA TTGG TTTTTTAGTTGTAAT bioD 9545 - 10195 + | dethiobiotin synthase sspB 10522 - 10184 - | stringent starvation protein B TERM 6 10278 - 10260 - G 71 -7.6 -3.52906 | TCACTTGCATAAATA CTATTAAT TGC ATTAATAG GCACAAAGATATTAA sspA 11154 - 10519 - | stringent starvation protein A TERM 7 10843 - 10869 + g 77 -6.1 -4.66609 | gap 1, opp_overlap 10843 AGGTGCTCTAGTAAA TCTGAAAATAAG TAAT CTT-TTTTCAGA TTTTTCAATAGGGTC petC 11879 - 11193 - | ubiquinol-cytochrome c reductase cytochrome c1 subunit petB 13107 - 11884 - | ubiquinol-cytochrome c reductase cytochrome b subunit petA 13717 - 13121 - | ubiquinol-cytochrome c reductase iron-sulfur subunit COSY_0013 14131 - 13826 - | hypothetical protein TERM 8 13895 - 13908 + g 70 -3.9 -4.87389 | overlap 13894 13898 TTGTATCAAAATTTC TAGTA ATTT TACTA TTTGTTTTTGAGCTC TERM 9 15552 - 15541 - g 72 -5.8 -4.4017 | opp_overlap 15541 CTAATTGTCAGAAAA CTGG ACAG CCAG TTTTGGTAGGAACGA secA 14184 - 16877 + | preprotein translocase SecA subunit pyrC 17357 - 18385 + | dihydroorotase TERM 10 18797 - 18816 + T 73 -4.4 -5.13527 | gap 1, opp_overlap 18797, overlap 18801 AGTCCAAAAAAAAAT TTAG-CGTT TTT AACGTCTAA TTTTATTTGTTCCTT ribF 19680 - 18778 - | bifunctional riboflavin biosynthesis protein RibF TERM 11 19964 - 19950 - R 71 -7.2 -3.94067 | opp_overlap 19959, overlap 19953 CAGGATAGATAATAA TGACTA AAT TAGTCA AACTATTTTAGTAGT metA 21054 - 19999 - | homoserine O-succinyltransferase TERM 12 20247 - 20273 + g 83 -2.3 -5.81412 | CGGTTAAATAATGTT CAGGGAATGGT GGATA GTTATTCCTTG TTTTTTTTAAATAGG COSY_0018 21890 - 21054 - | hypothetical protein TERM 13 21578 - 21589 + g 77 -5.8 -4.72272 | ATGTACCACCTAGTT CAGG ATTG CCTG TTTTTCCTAAAAAAG COSY_0019 23105 - 21918 - | aminotransferase fkpA 23462 - 23136 - | peptidyl-prolyl cis-trans isomerase COSY_0021 24274 - 23474 - | hypothetical protein TERM 14 23571 - 23586 + g 79 -5.4 -5.07107 | opp_overlap 23571 ATACCTTGTAAAATA CCCTTA ATTT TAGGGG TTTTTTCAAAATTTA purC 25155 - 24280 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 15 25558 - 25536 - g 73 -9.2 -2.84229 | opp_overlap 25535 25534, overlap 25535 AGATTCTTATTAAAT TGGTTCGTAA AAG TTACGATCCA GCTTTATATGAGTAC COSY_0023 25265 - 25882 + | hypothetical protein COSY_0024 27014 - 25842 - | hypothetical protein dxr 28140 - 26989 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase cdsA 28937 - 28137 - | phosphatidate cytidylyltransferase uppS 29649 - 28948 - | undecaprenyl diphosphate synthase TERM 16 29205 - 29219 + g 71 -8.6 -2.98145 | opp_overlap 29205, overlap 29204 29207 TTATGTCTCCAGCAA CAGCTA CTT TAGCTG CTTTAATTGCTGCTT TERM 17 29219 - 29205 - G 71 -8.6 -3.14564 | opp_overlap 29205 29204 29207 TTATGTCTCCAGCAA CAGCTA CTT TAGCTG CTTTAATTGCTGCTT TERM 18 30398 - 30420 + G 74 -9.2 -3.06528 | opp_overlap 30398, overlap 30396 30395 30411 GGTGTGCTACAAGGA GCTGCTGATG CAG TATTAGCAGC TAGTATTTTTCATTT TERM 19 30411 - 30425 + G 73 -3.6 -5.1166 | opp_overlap 30398, overlap 30398 30396 30395 GAGCTGCTGATGCAG TATTAG CAG CTAGTA TTTTTCATTTTGGTG hisF 29735 - 30502 + | imidazole glycerol phosphate synthase subunit HisF COSY_0029 30571 - 31107 + | hypothetical protein cyoE 31120 - 32013 + | protoheme IX farnesyltransferase COSY_0031 32014 - 32205 + | hypothetical protein COSY_0032 33288 - 32314 - | cytochrome c oxidase assembly protein COSY_0033 34216 - 33389 - | hypothetical protein TERM 20 34372 - 34397 + H 91 -10.7 -3.65068 | opp_overlap 34372, overlap 34365 34366 TATCATAAGTATAAA TTTTCAATACA CTAG TGTATTGAAAA TTATAGTATTTTTAT TERM 21 34397 - 34372 - H 95 -10.7 -4.11281 | opp_overlap 34372 34365 34366 TATCATAAGTATAAA TTTTCAATACA CTAG TGTATTGAAAA TTATAGTATTTTTAT coxB 34428 - 35537 + | cytochrome c oxidase subunit II coxA 35563 - 37164 + | cytochrome c oxidase subunit I TERM 22 37217 - 37185 - f 79 -8.6 -4.06335 | gap 1 AATAAAAATCAACAA GGTG-TGGTAATTAC TGTA GTAATTACCAGCGCC ATTGCAGTAGGTGTG TERM 23 37298 - 37286 - g 72 -4.9 -4.79949 | TTCGGAAAAAAATAA CAAAA ACA TTTTG GATAAAATTAATTTT TERM 24 37756 - 37766 + G 76 -2.6 -5.47399 | ATTAAAGACGTGAGC TTAT CTT ATAA TTTTTTTAAGATTAA COSY_0036 37255 - 37788 + | cytochrome c oxidase assembly protein coxC 37806 - 38690 + | cytochrome c oxidase subunit III COSY_0038 38756 - 38983 + | hypothetical protein COSY_0039 38980 - 39681 + | hypothetical protein TERM 25 39691 - 39678 - f 93 -3.9 -6.4275 | GAAAAATAAAAAAAA TTGAT CTAT ATCAA AAGAGCATGATGTGG TERM 26 40457 - 40433 - g 70 -8 -3.28712 | gap 1, opp_overlap 40432 GTGGTGGGGTCATAA TGCTGTT-GGA TTTT TCCTAACAGCA GGCTTTTTAGGTATT ccoN 39798 - 41216 + | cbb3-type cytochrome c oxidase subunit I ccoO 41231 - 41962 + | cbb3-type cytochrome c oxidase subunit II ccoQ 41962 - 42102 + | cbb3-type cytochrome c oxidase subunit IV ccoP 42121 - 43023 + | cbb3-type cytochrome c oxidase subunit III COSY_0044 44001 - 43633 - | hypothetical protein TERM 27 43715 - 43674 - G 74 -9.1 -3.08046 | opp_overlap 43667 43674 43681, overlap 43673 43676 GGTTTAGTTCAAAAG CATTTGATTCAATATTT GGATTAAT AATTATTGAATCAAATG TTAGTAAAATTGTTT TERM 28 43674 - 43715 + g 79 -9.8 -3.20769 | opp_overlap 43674 43673 43676, overlap 43667 43681 GGTTTAGTTCAAAAG CATTTGATTCAATATTTG GATTAA TAATTATTGAATCAAATG TTAGTAAAATTGTTT COSY_0045 44201 - 44001 - | hypothetical protein ftsK 46470 - 44194 - | cell division protein FtsK TERM 29 45863 - 45881 + g 74 -2.4 -5.40474 | TTTATAGTTTTAACT TGTGTTCT AAT ATAACGCA TTTTTTTAAGAAGAT TERM 30 46142 - 46156 + g 73 -3.6 -5.10767 | AAACGAATAGCAATT GTTAAG TAT TTTAAC TTTTTCTGTTCAGTG TERM 31 46385 - 46368 - G 82 -3.5 -5.61596 | gap 1 ATGCGGATAAAAAAA TAAG-ACC TAT GGTACTTA AAAAAATAAATAGTA TERM 32 46408 - 46396 - G 72 -2.7 -5.21683 | ACTTAAAAAAATAAA TAGTA TTT CACTA GCTATTTTAGTACGA trxB 46519 - 47463 + | thioredoxin-disulfide reductase pyrB 49033 - 48071 - | aspartate carbamoyltransferase catalytic chain COSY_0050 49442 - 49014 - | hypothetical protein TERM 33 49482 - 49460 - R 72 -7.8 -3.61715 | TAGTTGTTGTAATAA TTGATAGCCA ACA TAGCCATCAA TCGGTAATTTATTTG COSY_0051 49720 - 49439 - | hypothetical protein COSY_0052 50515 - 49850 - | hypothetical protein apbE 50634 - 51548 + | thiamin biosynthesis lipoprotein ApbE TERM 34 51596 - 51626 + F 71 -6.5 -4.05245 | ACTAAGATTTGTCAG TATTTTTTTGTTT GATTA AAATAAAAAAATA TTTAGTTATATGCTA TERM 35 52603 - 52615 + G 76 -2.7 -5.46129 | CCGGCATAGGAGTGA TATTG GGC CGATA TTTTTTGATTTCTTA COSY_0054 52239 - 52631 + | hypothetical protein gshB 53590 - 52628 - | glutathione synthetase TERM 36 53742 - 53714 - H 93 -13.5 -2.76263 | opp_overlap 53714, overlap 53711 GCTACCAGTTAAGTA CTTTTTTATTAAC TAG GTTAATAAAAAAG TTGATTAAGACCCCA TERM 37 53714 - 53742 + H 100 -13.5 -3.33696 | opp_overlap 53714 53711 GCTACCAGTTAAGTA CTTTTTTATTAAC TAG GTTAATAAAAAAG TTGATTAAGACCCCA TERM 38 53753 - 53767 + H 78 -4.2 -5.56673 | opp_overlap 53753 AAAAGTTGATTAAGA CCCC ATTTATA GGGG TTTTTTGTTATGCAT COSY_0057 53808 - 54269 + | hypothetical protein nusA 54310 - 55785 + | transcription termination factor NusA TERM 39 56151 - 56167 + G 81 -10.9 -2.95116 | opp_overlap 56150 56149, overlap 56148 GTTGCTAACGAAATG GCTAGAG CTG CTCTAGC TGCTTTGGATGCTGG TERM 40 57308 - 57254 - g 93 -14.4 -2.78816 | overlap 57303 GGATGCTTTATTAGA TGCTATTTCACTCACTGCCGAGATTT TAG AATTCTCGGCAGTGAGTGAAGGTCCA GCGCATGGCACTGTA infB 55839 - 58286 + | translation initiation factor IF-2 TERM 41 58502 - 58524 + G 86 -5.7 -5.58454 | gap 1, opp_overlap 58502 AAAAAAATGATTGAA CCACTA-CTT GATA AAGCTAGTGG TTTTTTTCGTATACA rbfA 58301 - 58645 + | ribosome-binding factor A truB 58668 - 59576 + | tRNA pseudouridine synthase B TERM 42 60555 - 60569 + G 70 -7.2 -3.89501 | opp_overlap 60554 60558 AAATTTTTCAATCAG TAATGG ATA CCATTA TTTATCCAACTGTTA purD 59816 - 61099 + | phosphoribosylamine--glycine ligase TERM 43 61095 - 61119 + T 100 -10.3 -4.55004 | opp_overlap 61100, overlap 61115 AAAGACTATATTCTA TTTAAGTATTA TTC TAATACTTAAA TTTATCTTTTCTCTT COSY_0063 62363 - 61656 - | hypothetical protein TERM 44 62114 - 62128 + g 70 -4.3 -4.77165 | GTGTTGTTACTTCTC CAGTA ATGAG TACTG TTTTGTTATAAACCA COSY_0064 62682 - 63512 + | methyltransferase coaE 64357 - 63752 - | dephospho-CoA kinase TERM 45 64101 - 64120 + g 93 -3 -5.9873 | gap 1, overlap 64105 GGATGTAGTATTGCT TC-AATCAA TTT TTGATTAGA TTTTTTTTCTAATAA TERM 46 64485 - 64469 - R 75 -9.5 -2.62396 | opp_overlap 64462, overlap 64471 CAGCTGGTTAGAGCA CAGCATT CAT AATGCTG GGGTCGGTGGTTCAA COSY_0067 65623 - 65198 - | nuclease TERM 47 66361 - 66375 + r 78 -5.8 -5.12707 | opp_overlap 66374 TAAAAAGAGAGTTGA TCTTTA AAA TAAAGA TTTTTTAGGGTTTAA TERM 48 66402 - 66374 - R 74 -6.1 -4.65933 | opp_overlap 66361 66376 66378, overlap 66376 66399 GATCTTTAAAATAAA GATTTTTTAGGGT TTA ACCCTAAAATATT ACTACAAGGAATATA TERM 49 66376 - 66400 + r 75 -8.7 -3.14344 | opp_overlap 66374 66376 66399, overlap 66378 TCTTTAAAATAAAGA TTTTTTAGGGT TTA ACCCTAAAATA TTACTACAAGGAATA TERM 50 66400 - 66376 - R 81 -8.7 -3.93868 | opp_overlap 66376 66378, overlap 66374 66399 TCTTTAAAATAAAGA TTTTTTAGGGT TTA ACCCTAAAATA TTACTACAAGGAATA TERM 51 66378 - 66398 + r 90 -11.3 -3.13403 | opp_overlap 66376 66374, overlap 66376 TTTAAAATAAAGATT TTTTAGGGT TTA ACCCTAAAA TATTACTACAAGGAA COSY_0068 66692 - 66489 - | hypothetical protein COSY_0069 68479 - 68273 - | hypothetical protein tktA 69410 - 71395 + | transketolase gapA 71501 - 72496 + | glyceraldehyde-3-phosphate dehydrogenase pgk 72944 - 74122 + | 3-phosphoglycerate kinase TERM 52 75363 - 75379 + G 70 -2.2 -5.26316 | AAGGCTACGCTTTAT CGGGGA GTTCA TCCTTG TTTTTTATCCACTAA COSY_0073 74115 - 75557 + | pyruvate kinase fbaA 75633 - 76694 + | fructose-bisphosphate aldolase, class II TERM 53 76713 - 76745 + F 100 -19.5 -4.10953 | opp_overlap 76713 76717, overlap 76717 TATAACAATTAATAA TAAATAAGGCTCGTT TCT AACGAGCCTTATTTA TTTGATTTGATAAAT TERM 54 76745 - 76713 - f 100 -19.5 -3.91564 | opp_overlap 76713 76717, overlap 76717 TATAACAATTAATAA TAAATAAGGCTCGTT TCT AACGAGCCTTATTTA TTTGATTTGATAAAT TERM 55 76717 - 76741 + F 100 -15.9 -4.63675 | opp_overlap 76717 76713, overlap 76713 ACAATTAATAATAAA TAAGGCTCGTT TCT AACGAGCCTTA TTTATTTGATTTGAT TERM 56 76741 - 76717 - f 100 -15.9 -4.52897 | opp_overlap 76713 76717, overlap 76713 ACAATTAATAATAAA TAAGGCTCGTT TCT AACGAGCCTTA TTTATTTGATTTGAT gidA 76761 - 78626 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA COSY_0076 78995 - 79795 + | hypothetical protein tatD 79802 - 80572 + | Mg-dependent deoxyribonuclease rluC 80569 - 81480 + | ribosomal large subunit pseudouridine synthase C ubiA 81477 - 82346 + | 4-hydroxybenzoate octaprenyltransferase dapD 83680 - 82865 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 57 83942 - 83918 - g 93 -9.3 -4.57755 | ACCTAGGAGACAAAA CCATTCATGCA AAA CGCATGAAGGG AAAATTCCGTAATTT COSY_0081 83842 - 85236 + | ferredoxin COSY_0082 85236 - 85715 + | hypothetical protein TERM 58 85993 - 85947 - T 100 -13.4 -3.76168 | opp_overlap 85958 85962 ATGATAACTCAATAA TTCTTTCAATAGCAACAATTTT ATT AAGATTGTTGCTATTGAAAATA AATACAACTAAAATA TERM 59 85958 - 85982 + T 87 -10.9 -3.04461 | opp_overlap 85947, overlap 85962 ATAATTCTTTCAATA GCAACAATTTT ATT AAGATTGTTGC TATTGAAAATAAATA znuC 86826 - 86107 - | zinc ABC transporter ATP-binding protein TERM 60 89459 - 89435 - g 76 -4.3 -5.20216 | GATATCATTAAAAAA TCCATGTTTGA TGT TTACACATGGA TTGGACAAGATAATC polA 86918 - 89647 + | DNA polymerase I TERM 61 90189 - 90210 + F 73 -6.7 -4.27316 | opp_overlap 90189 90186 90190, overlap 90190 AGATAAAAAAGATAA TTATCATTC ACAA GAATGATAG TTTTACGTTAAAGAA TERM 62 92080 - 92105 + G 100 -9.9 -4.75372 | overlap 92081 AATTAGCTGGCTATT TTCACAGTTAT TATA ATAACTGTGAG TTTTTGGTAGATGAT TERM 63 92081 - 92104 + G 89 -11.2 -3.445 | overlap 92080 ATTAGCTGGCTATTT TCACAGTTAT TATA ATAACTGTGA GTTTTTGGTAGATGA argS 90504 - 92222 + | arginyl-tRNA synthetase COSY_0086 92219 - 95389 + | ATP-dependent DNA helicase thiE 96841 - 96260 - | thiamine-phosphate pyrophosphorylase COSY_0088 96753 - 97796 + | hypothetical protein sat 98093 - 99301 + | ATP sulfurylase aprM 99516 - 100385 + | adenylylsulfate reductase membrane anchor aprB 100417 - 100896 + | adenylylsulfate reductase beta subunit aprA 100896 - 102779 + | adenylylsulfate reductase TERM 64 102812 - 102833 + F 100 -8.1 -5.82036 | opp_overlap 102812 TGATTTTAATAAGAA GACCAATAT TTAT ATGTTGGTC TTTTTTATTTATTGT COSY_0093 102845 - 103240 + | hypothetical protein TERM 65 103452 - 103477 + G 76 -4.1 -5.1356 | gap 1, overlap 103458 TGATGTAGATAAACT CTATGGGATTCG TGA CGAATCTT-TAG TTTTTATTGATAAAA TERM 66 103458 - 103472 + G 89 -8.6 -4.43037 | overlap 103452 AGATAAACTCTATGG GATTCG TGA CGAATC TTTAGTTTTTATTGA COSY_0094 103246 - 103752 + | peptidyl-prolyl cis-trans isomerase COSY_0095 103755 - 104108 + | hypothetical protein TERM 67 104162 - 104139 - T 75 -4 -5.49809 | gap 1, opp_overlap 104146 104146 104148, overlap 104109 104146 104148 TAAATTTTAAAAAAA GACATACTACA TAC TAT-GTATGTC TTTTTTAGGAAAATT hppA 106183 - 104183 - | membrane-bound proton-translocating pyrophosphatase TERM 68 106309 - 106265 - R 91 -10.5 -3.74077 | opp_overlap 106268 106271 TCCTATATAGTGAAA TGATAATTAAAATAATTTTAT AGA ATTAACTTATTTTAATTATCA TCTAGAGTGTTAACA adk 107339 - 106680 - | adenylate kinase pfkA 108693 - 107449 - | 6-phosphofructokinase COSY_0099 109228 - 108746 - | hypothetical protein cysS 111304 - 109916 - | cysteinyl-tRNA synthetase TERM 69 110574 - 110559 - G 82 -7.6 -4.46155 | CAGATATTCACAAAA GTGCAA TTAT TTGCAC CTTCAGATTGGGCAA ahpC 111445 - 112044 + | peroxiredoxin rubA 112092 - 112262 + | rubredoxin leuB 112298 - 113368 + | 3-isopropylmalate dehydrogenase COSY_0104 115339 - 114386 - | hypothetical protein TERM 70 115861 - 115842 - g 72 -8 -3.44622 | opp_overlap 115839 TATTGCTACAACTAA TTTCTTCA ATAT TGAAGAAA TGGATATTAAGTTCT nudE 115792 - 116337 + | ADP-ribose diphosphatase NudE lysA 117062 - 118303 + | diaminopimelate decarboxylase COSY_0107 118296 - 118598 + | hypothetical protein TERM 71 118792 - 118811 + GF 70 -4.4 -4.68908 | GTTTTAGTGAAATCT TAAAGAAG TTAC CTTTTTTA TTTATTTTGCGTAAA lpxB 118605 - 119690 + | lipid-A-disaccharide synthase nadC 119641 - 120504 + | nicotinate-nucleotide pyrophosphorylase (carboxylating) cysQ 121272 - 120490 - | sulfite synthesis pathway protein CysQ TERM 72 120579 - 120589 + g 74 -6.8 -4.40358 | opp_overlap 120579 120573 120578 120576 TCTGATTAACAACAC TGCC TCC GGCA TTTTGTAGAATACAT TERM 73 120770 - 120807 + g 72 -9.3 -2.69489 | gap 1, opp_overlap 120773 120777, overlap 120780 120783 TTGTGTGATGACCAA TGACC-AATCACAACTCT TAA AGGGTTGTGATTAGGACG TACATTTAATGGTTG TERM 74 120803 - 120773 - G 84 -12 -2.80016 | opp_overlap 120770 120780 120783, overlap 120777 TGTGATGACCAATGA CCAATCACAACTCT TAA AGGGTTGTGATTAG GACGTACATTTAATG TERM 75 120799 - 120777 - G 77 -9.2 -3.29364 | opp_overlap 120770 120780 120783, overlap 120773 ATGACCAATGACCAA TCACAACTCT TAA AGGGTTGTGA TTAGGACGTACATTT TERM 76 120822 - 120832 + g 70 -4 -5.011 | GTACATTTAATGGTT GAAT AAT ATTC TTTTGTTGTTTGAAT TERM 77 120901 - 120919 + g 74 -6 -4.50122 | opp_overlap 120900 120901 120905, overlap 120905 TGGCGGTGCGTAAAT CATACCAA ATA TTGGTTTG TGTTTTTTTATATAA TERM 78 120905 - 120915 + g 74 -5.4 -4.74406 | opp_overlap 120901 120900 120905, overlap 120901 GGTGCGTAAATCATA CCAA ATA TTGG TTTGTGTTTTTTTAT rpoD 123545 - 121734 - | DNA-directed RNA polymerase sigma-70 factor TERM 79 122527 - 122544 + g 76 -2.7 -5.42259 | overlap 122528 GTGAGTTGCATTTCC TCTTCGA ACTG TTGAAGG TTTTTTTGAGCATAG TERM 80 123286 - 123299 + g 72 -8.1 -3.42574 | opp_overlap 123275 123277, overlap 123275 123277 TCAAGAGCTGCTAGC GCTGC TATT GCAGC TTCTGCTGAAGTTGA TERM 81 123468 - 123479 + g 70 -2.2 -5.30616 | ATTAATTTCAGAGTA GGTT AAGT AGCC TTTTTCTTTCCCTAC prsA 124598 - 123645 - | ribose-phosphate pyrophosphokinase ispE 125579 - 124722 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase orn 126117 - 125572 - | oligoribonuclease COSY_0117 127149 - 126130 - | anthranilate phosphoribosyltransferase pepP 128371 - 127154 - | X-Pro aminopeptidase COSY_0119 128425 - 129141 + | hypothetical protein COSY_0120 130185 - 129127 - | hypothetical protein TERM 82 129532 - 129514 - G 76 -7.6 -4.05788 | GTGTTTGAAATTAAA TGATATTA TGT TAATATCA GTATGAATTTTAAAG proC 131287 - 130460 - | pyrroline-5-carboxylate reductase TERM 83 130843 - 130855 + g 83 -4.9 -5.5454 | CAGAATTTAGTATGT TTTCT GCT AGAAA TTTTTGTTTGTTTGA gph 131363 - 132031 + | phosphoglycolate phosphatase TERM 84 132103 - 132084 - g 77 -9.4 -3.21064 | opp_overlap 132083, overlap 132076 132082 TTGACAACCAACATA TTTGGCAT CCAT ATGCCAAA ATTCCTAACGAAGTT bioA 132059 - 133297 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 85 133762 - 133772 + T 75 -5.4 -5.08255 | TTTGCTATTTTAGTT TGTG AAT CACA TTTTATTTTAAAACT priA 136240 - 134198 - | primosomal protein N' TERM 86 136242 - 136215 - G 77 -10.2 -2.54467 | opp_overlap 136213, overlap 136214 136217 136226 GACAAAGTAATAGAG TATTGATAAAAT AAAT ATTTTATCAATA AATATCATTCAATCT COSY_0125 136268 - 136705 + | hypothetical protein mesJ 137931 - 136759 - | cell cycle protein MesJ TERM 87 137498 - 137511 + g 74 -3.1 -5.27938 | GGACGATAGTGAATA CCTTT TCCT AGAGG TTTTTCTTTAGGCAT accA 138880 - 137912 - | acetyl-CoA carboxylase carboxyl transferase subunit alpha TERM 88 138505 - 138517 + g 71 -3.3 -5.06816 | ATTTTATTTTTTCTT GGGTG GTT CGTCC TTTTTGTTGACCAAT TERM 89 139323 - 139313 - g 72 -2.6 -5.28778 | AGCACCTATAAAAAA TATT AAA AATA AGGTTGACAATTCGT COSY_0128 139149 - 139346 + | cbb3-type cytochrome oxidase maturation protein TERM 90 139929 - 139907 - g 100 -15 -4.44974 | opp_overlap 139907 GTAAATCTGATAAAA TTCAGCACGA AAT TCGTGCTGAA TTATTTCCGCTAGAA TERM 91 139907 - 139929 + G 100 -15 -3.9392 | opp_overlap 139907 GTAAATCTGATAAAA TTCAGCACGA AAT TCGTGCTGAA TTATTTCCGCTAGAA COSY_0129 139384 - 140061 + | hypothetical protein pitA 140073 - 141353 + | Na(+):phosphate symporter COSY_0131 141357 - 141587 + | hypothetical protein TERM 92 141579 - 141593 + F 76 -4.2 -5.27709 | opp_overlap 141579 141581, overlap 141581 CGTACACCAGAAGAA GACACC TAA GGTGTA TTTATTTTTTTATAA TERM 93 141581 - 141591 + F 73 -6.8 -4.23106 | opp_overlap 141581 141579, overlap 141579 TACACCAGAAGAAGA CACC TAA GGTG TATTTATTTTTTTAT TERM 94 142412 - 142388 - g 75 -8 -3.73435 | AAAGCAATAAAGCAA TGGATTCATC CTGTT GATAAATCCA AGAAACATGCATTAT TERM 95 142610 - 142600 - g 71 -5.4 -4.64766 | GTTAGACTTTAAAAA TCAC GAA GTGA ACGTATTAGTGGCAA rhlE 141728 - 142996 + | ATP-dependent RNA helicase RhlE COSY_0133 143007 - 143252 + | hypothetical protein TERM 96 143334 - 143312 - T 71 -6.4 -4.16842 | opp_overlap 143312 TTTATTTTTAATAAA TATATCAATG ATT CGTTGATATA TTATTGTGATTATAT TERM 97 143312 - 143334 + T 78 -8.6 -3.91959 | opp_overlap 143312 TTTATTTTTAATAAA TATATCAATG ATT CGTTGATATA TTATTGTGATTATAT tyrS 145204 - 144020 - | tyrosyl-tRNA synthetase TERM 98 144908 - 144919 + g 70 -4.4 -4.79949 | GGTGTAGCTTTTGGC GTTC TCTT GAAC TTGTTTTTTTGAAAG proA 146469 - 145210 - | gamma-glutamyl phosphate reductase TERM 99 146127 - 146103 - G 71 -6.4 -4.10188 | TAGATTCATAAATAA CGCCTATCAC ACCAA GTGACACGCG CATTTTGCCAACTTG holA 147476 - 146457 - | DNA polymerase III delta subunit COSY_0137 147912 - 147466 - | hypothetical protein ftsH 148068 - 149990 + | cell division protein FtsH folP 150026 - 150829 + | dihydropteroate synthase TERM 100 151027 - 151074 + G 91 -12.8 -3.24021 | overlap 151022 AGGCAGGATTTTTAT CTGCTGGTGTTGATGTGGGTTT GTTA GGACCTATGCCAACGCCAGCAG TTGCATATTTAACAC glmM 150831 - 152156 + | phosphoglucosamine mutase TERM 101 153169 - 153187 + F 73 -9 -2.78015 | opp_overlap 153171 153180, overlap 153168 153171 TCTCATAATTTATGA TACTACTA AGA TAGTAGTA GTTTACACTAGTTAA COSY_0141 153232 - 153975 + | hypothetical protein rnfA 154174 - 154749 + | electron transport complex protein RnfA TERM 102 154988 - 154972 - g 95 -12.3 -3.54177 | overlap 154968 GCGAAAATTAATCAA TGCCCAC CTG GTGGGCA AGAAGTAGCTGATGC rnfB 154756 - 155301 + | electron transport complex protein RnfB TERM 103 155723 - 155737 + G 71 -8.6 -3.06492 | AGGAATGGGTGGTGC TGGGTT TCC AACCCA TGTTAAGATAAATAA rnfC 155304 - 156794 + | electron transport complex protein RnfC rnfD 156791 - 157735 + | electron transport complex protein RnfD TERM 104 157773 - 157794 + G 85 -4.5 -5.67283 | overlap 157775 AGGGGCGCTATTGTT TGTATTCAC AGTA GTGAGTATA TTTTTTGTTTCGCTT rnfG 157738 - 158343 + | electron transport complex protein RnfG TERM 105 158453 - 158467 + G 76 -2.8 -5.47218 | opp_overlap 158448, overlap 158448 CATAGATATACAATT TAACCA AAT TGGTGA TTTTTTTCAATCAGG queA 158334 - 159356 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 106 159542 - 159517 - T 82 -9.3 -3.38339 | opp_overlap 159516 159511 AGCAGTTAATATTAA GTTATTTTTAT GTAG ATAAAAATAAC ATTAGATATTTTATA COSY_0148 160576 - 159806 - | hypothetical protein sucD 161442 - 160573 - | succinyl-CoA synthetase alpha subunit TERM 107 160616 - 160638 + g 74 -5.5 -4.6635 | overlap 160596 CCAATACTTGTGGGT GTTGGCGCA ATTGC TACGCCGAC TTTTCTTAAAGCTTT sucC 162599 - 161439 - | succinyl-CoA synthetase beta subunit efp 163299 - 163862 + | translation elongation factor EF-P genX 163913 - 164797 + | lysyl-tRNA synthetase, class II TERM 108 164822 - 164812 - f 70 -2.6 -5.49729 | opp_overlap 164812 AATTAGTTAAAAAAA TAAA AAA TTTA TGATTAAATTTATCT COSY_0153 164822 - 166204 + | hypothetical protein TERM 109 167196 - 167218 + G 74 -5.6 -4.83032 | ATTTATATTGAAGAT TTACGTGAAG AGT TTGCACGTAA TTTTGTATTTCCTAT TERM 110 167770 - 167757 - g 74 -5.9 -4.49906 | opp_overlap 167757, overlap 167758 GAAGATTTAAATAAA CGCGC AGGT GCGCA TGGTATTGGTCGTGA TERM 111 167907 - 167925 + G 90 -11.8 -3.37354 | CTTGATCGTGCAGCT GCTCATCT AAA AGATGAGC TTATGCCTAAATATG argG 166998 - 168209 + | argininosuccinate synthase TERM 112 168435 - 168451 + T 75 -9.5 -2.62616 | TCGAACTCGCGACAT TCACGTT GGC AACGTGA TGCTCTACCAACTGA pgsA 169116 - 168538 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase murF 170562 - 169282 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase murE 172462 - 171068 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase soxB 172596 - 174485 + | sulfur oxidation protein SoxB TERM 113 175066 - 175056 - T 75 -4 -5.46657 | TATTCTAATAAAAAA GTAA AAG TTAC AATTGATTCAAGTTT TERM 114 175276 - 175254 - T 87 -10.8 -3.1637 | opp_overlap 175254, overlap 175244 AGATATCTCTATTAA TTTATTCAAC TAA GTTGAATAAA TGATTAAAAACCTTA TERM 115 175254 - 175276 + T 81 -10.8 -2.71681 | opp_overlap 175254 175244 AGATATCTCTATTAA TTTATTCAAC TAA GTTGAATAAA TGATTAAAAACCTTA COSY_0163 176515 - 175535 - | polysialic acid capsule expression protein TERM 116 176607 - 176620 + H 73 -3.1 -5.55698 | GTATAATATTTTTCG CTTGC CAAT GTAAG TTTTTTTAGATTATA TERM 117 176819 - 176809 - H 70 -4 -5.14563 | overlap 176811 TTTTTTATTAAAAAA GTTT GTT AAAC AATCTCCGTAAATCT rpsL 176960 - 177334 + | 30S ribosomal protein S12 rpsG 177367 - 177834 + | 30S ribosomal protein S7 TERM 118 178264 - 178274 + G 74 -5.4 -4.71828 | opp_overlap 178264 AATAAATACAACGTA CCAA GAA TTGG TTTTGTTAATAAAAT TERM 119 178297 - 178307 + G 71 -3.2 -5.18561 | AATAAAATGGATCGT TCTG GTG CGGA TTTTTTACGTGTTTG fusA 177859 - 179961 + | translation elongation factor EF-G tufA 179972 - 181162 + | elongation factor Tu rpsJ 181250 - 181561 + | 30S ribosomal protein S10 rplC 181590 - 182315 + | 50S ribosomal protein L3 rplD 182329 - 182943 + | 50S ribosomal protein L4 rplW 182940 - 183230 + | 50S ribosomal protein L23 TERM 120 183282 - 183265 - g 71 -3.4 -5.18643 | overlap 183266 GTAATTAAAAGAAAA CCTACC TCACCT GGTAGA AGATTTGTTGTTAGT rplB 183241 - 184071 + | 50S ribosomal protein L2 rpsS 184076 - 184345 + | 30S ribosomal protein S19 rplV 184366 - 184698 + | 50S ribosomal protein L22 rpsC 184706 - 185398 + | 30S ribosomal protein S3 rplP 185415 - 185825 + | 50S ribosomal protein L16 rpmC 185825 - 186013 + | 50S ribosomal protein L29 rpsQ 186010 - 186276 + | 30S ribosomal protein S17 rplN 186305 - 186673 + | 50S ribosomal protein L14 rplX 186673 - 186984 + | 50S ribosomal protein L24 rplE 187014 - 187553 + | 50S ribosomal protein L5 rpsN 187559 - 187864 + | 30S ribosomal protein S14 rpsH 187876 - 188271 + | 30S ribosomal protein S8 rplF 188287 - 188832 + | 50S ribosomal protein L6 rplR 188850 - 189197 + | 50S ribosomal protein L18 rpsE 189240 - 189755 + | 30S ribosomal protein S5 rpmD 189755 - 189997 + | 50S ribosomal protein L30 rplO 190011 - 190445 + | 50S ribosomal protein L15 secY 190446 - 191747 + | preprotein translocase SecY subunit rpmJ 191762 - 191875 + | 50S ribosomal protein L36 TERM 121 192084 - 192098 + G 72 -5 -4.81551 | ATAAACATATTGTGA TTGGCT TAC AGTCAA TTTTTGGTATAGGTG TERM 122 192227 - 192251 + G 77 -9.3 -3.28912 | opp_overlap 192227 ATTGCTAAGTATGAA GTTGAAGGCGA TCT TCGTCGTCAAC TTGCTATGGATATCA rpsM 192035 - 192388 + | 30S ribosomal protein S13 rpsK 192407 - 192793 + | 30S ribosomal protein S11 rpsD 192803 - 193429 + | 30S ribosomal protein S4 rpoA 193440 - 194420 + | DNA-directed RNA polymerase alpha subunit TERM 123 194756 - 194728 - g 71 -6.8 -4.13945 | gap 1 ATTCGTATTTTAAAA GCTGGTTT-TCGC ACTG GCGATAAAGCAGC AATGGCAATTGTTCA rplQ 194431 - 194826 + | 50S ribosomal protein L17 rpsU 194838 - 195053 + | 30S ribosomal protein S21 cca 195605 - 196669 + | tRNA nucleotidyltransferase (CCA-adding enzyme) COSY_0198 199305 - 196825 - | hypothetical protein engB 199888 - 199289 - | GTP-binding protein TERM 124 199422 - 199434 + g 85 -4.1 -5.59564 | ACTTTAAAATACGTA TTGCT GGC AGCGA TTTTTTTGAGTTTGT COSY_0200 199963 - 200253 + | hypothetical protein COSY_0201 200362 - 201003 + | cytochrome c, class I TERM 125 201065 - 201049 - f 77 -6.5 -4.70887 | opp_overlap 201049 TGATTAATAAATAAA GGGTAGT TAT ACTGCCC TTTTTCATTGTCTGT TERM 126 201049 - 201065 + F 100 -8.7 -4.9755 | opp_overlap 201049 TGATTAATAAATAAA GGGTAGT TAT ACTGCCC TTTTTCATTGTCTGT TERM 127 202326 - 202316 - g 70 -4 -4.91084 | opp_overlap 202316 GATCCAACAAGAAAA TCAA GTA TTGA GTTATTAGTAGTTGA tig 201131 - 202420 + | trigger factor TERM 128 202566 - 202584 + GF 82 -4.6 -5.45726 | overlap 202554 GATTACATGGCGAAT GTAGTTGT TGC GCAATTAC TTTTTTTAGAGTCTG clpP 202425 - 203021 + | ATP-dependent Clp protease proteolytic subunit ClpP clpX 202996 - 204291 + | ATP-dependent protease ATP-binding subunit lon 204729 - 207065 + | ATP-dependent protease La COSY_0206 207485 - 207072 - | hypothetical protein TERM 129 207468 - 207478 + g 70 -4 -4.90477 | AAGTATTGTAATACT GAAT AAT ATTC TTTTCATTTTTTCTC TERM 130 208674 - 208661 - g 73 -8.1 -3.55444 | TTGGCAGTTTCTAAA GGCTC GAGC GAGCC ACCCAAACTAATTAG pepA 208001 - 209440 + | leucyl aminopeptidase TERM 131 210317 - 210363 + T 100 -14.8 -4.31397 | opp_overlap 210324 210333, overlap 210311 210319 210322 210333 AGTAGGTTATTAATT TTTAATATTCAAAAAACCGTCT TTT AGGCGGTTTTTTGAATATGATA TTGTTTTCTAAAAAT TERM 132 210319 - 210361 + T 100 -17.4 -3.75581 | opp_overlap 210324 210333, overlap 210311 210317 210322 210333 TAGGTTATTAATTTT TAATATTCAAAAAACCGTCT TTT AGGCGGTTTTTTGAATATGA TATTGTTTTCTAAAA TERM 133 210322 - 210358 + T 100 -19.1 -2.95962 | opp_overlap 210324 210333, overlap 210319 210317 210333 GTTATTAATTTTTAA TATTCAAAAAACCGTCT TTT AGGCGGTTTTTTGAATA TGATATTGTTTTCTA TERM 134 210356 - 210324 - T 100 -15.1 -3.06737 | opp_overlap 210322 210319 210317 210333, overlap 210333 TATTAATTTTTAATA TTCAAAAAACCGTCT TTT AGGCGGTTTTTTGAA TATGATATTGTTTTC TERM 135 210347 - 210333 - T 78 -5.6 -5.1615 | opp_overlap 210322 210319 210317 210333, overlap 210324 TTAATATTCAAAAAA CCGTCT TTT AGGCGG TTTTTTGAATATGAT TERM 136 210333 - 210347 + T 93 -7.8 -5.13473 | opp_overlap 210333 210324, overlap 210322 210319 210317 TTAATATTCAAAAAA CCGTCT TTT AGGCGG TTTTTTGAATATGAT COSY_0208 210991 - 210371 - | hypothetical protein COSY_0209 211500 - 211096 - | hypothetical protein COSY_0210 211850 - 211500 - | nitrogen regulatory protein PII COSY_0211 212599 - 211859 - | hypothetical protein COSY_0212 213327 - 212596 - | hypothetical protein TERM 137 213307 - 213317 + g 84 -5.4 -5.52384 | opp_overlap 213307 TAGATTTTTAGTAAA CTGT TGA ACAG TTTTTTTCATAAAGA pabC 213433 - 214320 + | 4-amino-4-deoxychorismate lyase tmk 214675 - 215292 + | thymidylate kinase TERM 138 215743 - 215720 - g 74 -3.2 -5.26316 | overlap 215722 GGAGCCTAGAAAAAA TACGCTAA TTATTATT TTAGCGCA TCATGTTGAAAACTT holB 215289 - 216317 + | DNA polymerase III delta prime subunit hemL 216332 - 217618 + | glutamate-1-semialdehyde 2,1-aminomutase TERM 139 217959 - 217948 - f 73 -4.4 -5.10461 | TGGAGGTAATAAAAA CACT AATC AGTG TTAAGAAAATGTAAT COSY_0217 217973 - 218626 + | HAD family hydrolase TERM 140 218690 - 218677 - T 70 -4.5 -5.06735 | opp_overlap 218680, overlap 218679 TAGAAAGCACAAAAA CCTCC TTTT AGAGG AAAGGTTTTTGTTGA TERM 141 218680 - 218695 + T 70 -4 -5.14163 | opp_overlap 218677 218679 AAAGCACAAAAACCT CCTTTT AGAG GAAAGG TTTTTGTTGATGGGT COSY_0218 219237 - 218722 - | hypothetical protein COSY_0219 219490 - 219266 - | hypothetical protein rpiA 220999 - 220337 - | ribose 5-phosphate isomerase TERM 142 221499 - 221513 + G 72 -2.8 -5.36441 | TAGGTAATAATGGTT TTGGTT ATG ACCCAA TTTTTTATGTGCCAA COSY_0221 221042 - 221632 + | xanthosine triphosphate pyrophosphatase TERM 143 222691 - 222716 + G 71 -3.3 -5.13521 | overlap 222692 TTGGATGGCAAGCTG GCGAAACCT AGTAAAAA AGGTTTCGA TTTTTTGAATGATTT hemN 221632 - 222750 + | oxygen-independent coproporphyrinogen III oxidase argB 223648 - 224577 + | acetylglutamate kinase TERM 144 224608 - 224645 + G 81 -7.9 -4.40173 | gap 1, opp_overlap 224610 224611, overlap 224604 224611 224613 GGTTTGTGATTGTCA AATTTTGGCTCATTCTCG GTT CGAGAATGAG-CAATATA TTTTAACTTTATCAT TERM 145 224643 - 224610 - g 86 -10.5 -3.57144 | gap 1, opp_overlap 224604 224608 224611 224613, overlap 224611 TTTGTGATTGTCAAA TTTTGGCTCATTCTCG GTT CGAGAATGAG-CAATA TATTTTAACTTTATC TERM 146 224611 - 224643 + G 91 -12.1 -3.79633 | opp_overlap 224610 224611, overlap 224604 224608 224613 TTGTGATTGTCAAAT TTTGGCTCATTCTCG GTT CGAGAATGAGCAATA TATTTTAACTTTATC TERM 147 224643 - 224611 - g 84 -12.1 -2.74144 | opp_overlap 224604 224611 224608 224613, overlap 224610 TTGTGATTGTCAAAT TTTGGCTCATTCTCG GTT CGAGAATGAGCAATA TATTTTAACTTTATC TERM 148 224613 - 224641 + G 100 -14.7 -3.46399 | opp_overlap 224610 224611, overlap 224604 224611 224608 GTGATTGTCAAATTT TGGCTCATTCTCG GTT CGAGAATGAGCAA TATATTTTAACTTTA pyrK 224564 - 225421 + | dihydroorotate dehydrogenase electron transfer subunit COSY_0225 225418 - 226056 + | hypothetical protein TERM 149 226453 - 226436 - g 71 -5.6 -4.59773 | overlap 226448 GTTGATTGTGAAAAA GTGTCA GGAAAG TGACAC AAGCCATATTTTAAT COSY_0226 226236 - 226721 + | L-asparaginase TERM 150 226845 - 226862 + F 72 -8.5 -3.23026 | opp_overlap 226845 226844 226840, overlap 226844 ATTTTTTAAATATAC TTAGTCC TGTT GGACTAA CTTTATGTTTAATTG TERM 151 227029 - 227006 - f 70 -6.2 -4.33755 | opp_overlap 227006 ATCAATATCAATAAA TAACTCATTT GTAA AAATAAGTTA TAATTTCTTAAGGTC TERM 152 227161 - 227176 + G 81 -6.2 -4.89393 | TTTTCGCTCATTATT GTACTA ATAG TAGTAC TTTTTGTAACATTTC TERM 153 229525 - 229499 - g 74 -5.2 -4.81359 | AATTTAAATATAAAA TAACAGGTCCAT GGA ATAAGCCTGTTA TTGAGAAGATATCAA COSY_0227 227077 - 229551 + | hypothetical protein tldD 229548 - 230975 + | PmbA/TldD family DNA gyrase modulator TERM 154 231202 - 231188 - g 86 -2.8 -5.9003 | opp_overlap 231188 231186 231190, overlap 231190 AAATGAAGAAAAAAA TACTCA ATT TGAGTG TGGTTTTCCTGCCTT TERM 155 231200 - 231190 - g 71 -5.4 -4.55661 | opp_overlap 231190 231188 231186, overlap 231188 ATGAAGAAAAAAATA CTCA ATT TGAG TGTGGTTTTCCTGCC TERM 156 231326 - 231338 + G 81 -7.7 -4.35361 | GGCGGTAGTTCAGTC CCAAC TTG GTTGG TTTGGTTTTGTTGTA nuoA 231072 - 231428 + | NADH dehydrogenase I chain A nuoB 231432 - 231911 + | NADH dehydrogenase I chain B nuoC 231911 - 232525 + | NADH dehydrogenase I chain C TERM 157 232628 - 232641 + G 72 -9.5 -2.51969 | overlap 232627 232625 232620 TGGTGAGGTTATTGA GCGGG CTGA CCCGC ATATTGGCTTGTTAC nuoD 232527 - 233780 + | NADH dehydrogenase subunit D nuoE 233777 - 234250 + | NADH dehydrogenase I chain E nuoF 234247 - 235515 + | NADH dehydrogenase I chain F TERM 158 235970 - 235986 + G 78 -7.3 -4.43012 | overlap 235971 ACACGTTGTATTCAT TGTACAC GTT GTGTACG TTTTGGTGTTGAAAT TERM 159 235971 - 235985 + G 73 -8.6 -3.25084 | overlap 235970 CACGTTGTATTCATT GTACAC GTT GTGTAC GTTTTGGTGTTGAAA nuoG 235520 - 237781 + | NADH dehydrogenase I chain G nuoH 237781 - 238854 + | NADH dehydrogenase I chain H nuoI 238868 - 239359 + | NADH dehydrogenase subunit I nuoJ 239369 - 239980 + | NADH dehydrogenase I chain J nuoK 239981 - 240286 + | NADH dehydrogenase I chain K TERM 160 241455 - 241472 + G 70 -4.1 -4.66264 | TATTGGCACATTGGC CCTGG TTGGCTTT CCAGG TTTTTCAGGCTTTTA TERM 161 241592 - 241602 + G 93 -4 -5.9663 | TTACTTCTTTTTATT CATT AAG AATG TTTTTTTTGGTATTT nuoL 240289 - 242250 + | NADH dehydrogenase I chain L TERM 162 242282 - 242292 + G 82 -5.4 -5.35459 | ACTTAGTTTACTAAT TTGG TTG CCAA TTTTTTCTGGTGTAT TERM 163 242331 - 242347 + G 83 -10.9 -3.09193 | TTTATTGGTAACGGT CGTGCTA ATA TAGCACG TTGGGTAAGTCTGAT nuoM 242253 - 243758 + | NADH dehydrogenase I chain M nuoN 243769 - 245223 + | NADH dehydrogenase I chain N TERM 164 245364 - 245382 + T 78 -7.6 -4.34285 | opp_overlap 245364 245368, overlap 245361 TATTGGGTTTCAAGA GTAATATT GGC AATATTAC TTGTTTGTTTCCATG bioC 246136 - 245348 - | biotin biosynthesis protein BioC COSY_0244 247002 - 246124 - | zinc ABC transporter substrate-binding protein TERM 165 247221 - 247240 + r 75 -6.6 -4.49981 | opp_overlap 247221 247224 TGTATTTTTTAATGA TAAGAAAT AAAT ATTTCTTA TTTTATCATAGTATC COSY_0245 248283 - 247900 - | hypothetical protein frr 248970 - 248413 - | ribosome recycling factor TERM 166 248612 - 248624 + g 80 -6.3 -4.81083 | TTGGCTTTTTCCGCT TCATC TTT GATGA TTTTTACTAGTTCAC pyrH 249687 - 248974 - | uridylate kinase TERM 167 250457 - 250437 - g 93 -10.5 -4.02022 | opp_overlap 250436 250437 CTGAATCATTAGAAA CTGCACTTA ATT TAAGCGCAG GTTTGGTACGCATTG uvrA 249770 - 252586 + | excinuclease ABC subunit A purN 253657 - 253046 - | phosphoribosylglycinamide formyltransferase purM 254674 - 253673 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 168 254825 - 254835 + G 79 -4 -5.45652 | GTCAATATTTTTTAG CAAT GGT ATTG TTTTTTGTTGCAGGT TERM 169 254980 - 255007 + G 83 -5 -5.49729 | opp_overlap 254984 TTATATGTGATTAGA TTAATACCATTA TGGT TATTGGTATTGA TTTTTTTACGTGATT COSY_0251 254728 - 255294 + | hypothetical protein COSY_0252 255291 - 255965 + | DnaA family protein COSY_0253 256369 - 255962 - | hypothetical protein TERM 170 256003 - 256020 + g 74 -2.1 -5.45726 | GTTCAATTTTAGGCA TTAGTTT TGAA AAATTAA TTTTTTTGAAATCTA cysG 256466 - 257866 + | siroheme synthase COSY_0255 258105 - 257902 - | hypothetical protein serB 258304 - 259113 + | phosphoserine phosphatase TERM 171 260040 - 260051 + G 70 -3.6 -4.88786 | overlap 260040 TTCATTTGCTACTGA CCCT GATA GGGG TTTATTTGTTTTGAT ccmF 259120 - 261027 + | cytochrome c-type biogenesis protein CcmF TERM 172 261317 - 261266 - g 93 -12.9 -3.38158 | opp_overlap 261265 261263 261266 261268 261298, overlap 261275 261295 261304 ACTAAAACAAGCGAA TAGTATTAATACTAGTACTAATA ATAACA TATTAATAATAGTATTAATACTA GTATTGTTACCTGTC TERM 173 261266 - 261317 + G 81 -10.7 -2.65586 | opp_overlap 261266 261275 261295 261304, overlap 261265 261263 261268 261298 ACTAAAACAAGCGAA TAGTATTAATACTAGTACTAATA ATAACA TATTAATAATAGTATTAATACTA GTATTGTTACCTGTC COSY_0259 261024 - 262190 + | hypothetical protein dapE 262195 - 263325 + | succinyl-diaminopimelate desuccinylase trmD 263329 - 264003 + | tRNA (guanine-N1-)-methyltransferase TERM 174 264094 - 264108 + F 70 -4.4 -4.95155 | ACTATAGATTGTTGT TTATTT GCT AAATAA TTTTTATAATCTGAC glnK 264163 - 264501 + | nitrogen regulatory protein PII TERM 175 264630 - 264643 + G 74 -6.7 -4.35644 | opp_overlap 264629, overlap 264588 TGTTATTGATGACAT TGCCA GGTT TGGCA TTATTTTATGGTGGT amtB 264491 - 265786 + | ammonium transporter TERM 176 266408 - 266454 + G 100 -11.1 -5.05505 | opp_overlap 266420 TTAAAGATGCAACGG GTAATTTGAACATTGCACAAT CATTA ATTGAGCAATGTTCGGATGAC TTTTTGCTTTATAGT dapA 265930 - 266790 + | dihydrodipicolinate synthase TERM 177 267572 - 267547 - g 82 -3.3 -5.63517 | overlap 267549 TTGCTAAAGAAAAAA TTCTTGCTGCT AGAG AGCAACAAATA TTAACTGTTGTAGTT COSY_0265 266793 - 267926 + | hypothetical protein lig 267941 - 269839 + | DNA ligase (NAD+) COSY_0267 270118 - 270465 + | nitrogen regulatory protein PII TERM 178 270512 - 270482 - f 70 -7.2 -3.69094 | opp_overlap 270481 270474 270491, overlap 270483 270485 270491 AAGGGAGCATTGAAA TTATATAAATAAAT GTA ATTTATTTATATAG ATATCTAATGATTTT TERM 179 270511 - 270483 - f 82 -10.7 -2.80975 | opp_overlap 270481 270474 270491, overlap 270482 270485 270491 AGGGAGCATTGAAAT TATATAAATAAAT GTA ATTTATTTATATA GATATCTAATGATTT TERM 180 270509 - 270485 - f 74 -8.9 -2.95116 | opp_overlap 270481 270474 270491, overlap 270483 270482 270491 GGAGCATTGAAATTA TATAAATAAAT GTA ATTTATTTATA TAGATATCTAATGAT TERM 181 270916 - 270896 - g 86 -2.7 -5.92337 | opp_overlap 270898 270898 270901, overlap 270898 AGATATGAAAAAAAA TATAATAAT ATT ATTATTATG CTTAATTTCAATATT TERM 182 270914 - 270898 - g 71 -5.3 -4.59226 | opp_overlap 270898 270898 270901, overlap 270896 ATATGAAAAAAAATA TAATAAT ATT ATTATTA TGCTTAATTTCAATA TERM 183 271463 - 271475 + G 71 -6.3 -4.1711 | TTATAAAGGATTGGA CCTTA CAT TAAGG TTTGTTAAGAATAAT COSY_0268 270885 - 271547 + | hypothetical protein COSY_0269 271639 - 272079 + | hypothetical protein nasT 272076 - 272663 + | response regulator NasT tatC 273503 - 272682 - | sec-independent protein translocase protein TatC TERM 184 273039 - 273026 - G 74 -5.3 -4.74598 | CAAAGGCAAAAGAAA CTTTG AGAA CAAAG TCTAGATAGTATTGA TERM 185 273178 - 273161 - G 77 -4.9 -5.18371 | opp_overlap 273176, overlap 273163 CTGCATAAAACAAAA TAGTTGT TGAG ACAACCA ATGGTAAAATCATTT COSY_0272 273784 - 273503 - | hypothetical protein TERM 186 273564 - 273577 + g 76 -3.9 -5.28176 | GTTTCATCAATAACT TCTAA AATA TTAGA TTTTTTATCCATAGA COSY_0273 273997 - 273788 - | hypothetical protein TERM 187 273875 - 273889 + g 79 -8.6 -3.76492 | TGTTGATTCCTTCAT GGCTTT TTT AAAGCC TTTAATGGCATTGCC hisE 274332 - 274015 - | phosphoribosyl-ATP pyrophosphohydrolase COSY_0275 274705 - 274325 - | phosphoribosyl-AMP cyclohydrolase TERM 188 274526 - 274536 + g 73 -4 -5.06451 | TCCAGACTCTTCGCC TTTG AAC CAAA TTTTTTGACGTGATC gor 276160 - 274829 - | glutathione oxidoreductase TERM 189 276039 - 276024 - G 71 -9 -3.07816 | TTTTTAGGCACGCAA CCTGTG TTAA CACAGG TACCACCAATCGTTT TERM 190 276929 - 276981 + r 100 -17.6 -4.01088 | opp_overlap 276934, overlap 276923 276934 TTTTTTATCTTTACT CTAAATGGTTTGTTAAAATATTTG TTAGT TAAATAATTTAACAAACCATTTAG TTATCTTTTGGTATC TERM 191 276976 - 276934 - R 95 -11 -3.60296 | opp_overlap 276929 276934 TATCTTTACTCTAAA TGGTTTGTTAAAATATTT GTTAGTT AAATAATTTAACAAACCA TTTAGTTATCTTTTG TERM 192 276934 - 276976 + r 100 -11.7 -4.13911 | opp_overlap 276934, overlap 276929 TATCTTTACTCTAAA TGGTTTGTTAAAATATTTG TTAGT TAAATAATTTAACAAACCA TTTAGTTATCTTTTG TERM 193 277003 - 277016 + r 70 -2.5 -5.48213 | overlap 277002 TTTGGTATCAAGAGT TATTA CTAA TAATA TTTTTATTTTCCCTC COSY_0277 277422 - 277039 - | hypothetical protein TERM 194 277345 - 277321 - G 79 -8 -4.00843 | opp_overlap 277320, overlap 277319 TGGAAAGATAAAATA TGGTCTAAAA CCTTT TTCTAGACCA ATAACTTCTGTAAAG TERM 195 277462 - 277452 - R 75 -5.4 -5.06816 | ATTCTTTAATAAAAA CCTA TGT TAGG ATATAAAATATGTTT prfB 278691 - 277597 - | peptide chain release factor RF-2 TERM 196 278261 - 278274 + g 73 -8.1 -3.66784 | CGTAACACCATTTCT GCCCA ATCT TGGGC TTCTGTTCCGCCTGA rpsO 279023 - 278763 - | 30S ribosomal protein S15 htrB 279974 - 279078 - | lipid A biosynthesis lauroyl acyltransferase TERM 197 279606 - 279620 + g 70 -2.2 -5.36441 | AAAATGTCCTACTAG TAAAAT AAT ATTTTG TTTTTTATCTAGGGC TERM 198 279776 - 279794 + g 74 -6.8 -4.43189 | overlap 279782 TCTTTACTTGATCTT TGTTTTTC TCA GGAAAACA TTTTGTGAGATTAAT dnaG 280007 - 281791 + | DNA primase TERM 199 281781 - 281791 + T 75 -4 -5.5762 | opp_overlap 281781 CAAGAAAAGGCAAAC CTAA AAG TTAG TTTTTTATGTTTAAT mraW 282943 - 282020 - | S-adenosyl-methyltransferase TERM 200 282154 - 282165 + g 74 -3 -5.31877 | opp_overlap 282147 282154, overlap 282158 CAATAATAGGCAAAC CTTT TGGC AAAG TTTTTTGTCGTGAAT COSY_0283 283358 - 282933 - | hypothetical protein TERM 201 283072 - 283089 + g 71 -8.5 -3.04944 | opp_overlap 283069, overlap 283070 283067 TTACCTATGATAGTT TTCCCAT CTAC ATGGGAA TAATGTTTTATTGTT TERM 202 283678 - 283707 + H 75 -8.1 -3.53531 | overlap 283676 283673 283680 TTAAGAAGTTTTTTT GACTTTCAATAAT ATTT ATTATTGAAAGTA TTGTAATCTTCATAA TERM 203 283680 - 283705 + H 90 -10.7 -3.3375 | overlap 283676 283673 283678 AAGAAGTTTTTTTGA CTTTCAATAAT ATTT ATTATTGAAAG TATTGTAATCTTCAT TERM 204 285870 - 285847 - g 100 -9.6 -4.44797 | opp_overlap 285847 285851 285867 CCATTAACAGGAAAA TTAAGCCCCC CTTT AGGGGCTCAA TTTATTGATATTATA TERM 205 285847 - 285870 + G 74 -6.7 -4.34759 | opp_overlap 285847, overlap 285851 285867 CCATTAACAGGAAAA TTAAGCCCC CCTTTA GGGGCTCAA TTTATTGATATTATA parC 284122 - 286359 + | DNA topoisomerase IV subunit A ptpS 286461 - 286838 + | 6-pyruvoyltetrahydropterin synthase TERM 206 286959 - 286973 + G 75 -8.6 -3.5032 | opp_overlap 286959, overlap 286957 GTGATGGTAATAAAA TGCCTA CGA TAGGCA TGTTTACTATGACAG TERM 207 286973 - 286959 - g 93 -8.6 -4.65916 | opp_overlap 286959 286957 GTGATGGTAATAAAA TGCCTA CGA TAGGCA TGTTTACTATGACAG COSY_0286 286835 - 287629 + | putative GTP cyclohydrolase aroG 287623 - 288690 + | phospho-2-dehydro-3-deoxyheptonate aldolase gyrA 288802 - 291387 + | DNA gyrase subunit A GyrA prfC 293054 - 291483 - | peptide chain release factor RF-3 COSY_0290 293497 - 293051 - | deoxycytidylate deaminase mraY 294585 - 293500 - | phospho-N-acetylmuramoyl-pentapeptide- transferase TERM 208 295085 - 295101 + H 72 -3.7 -5.31456 | opp_overlap 295087, overlap 295087 TAAACCCACAAAATT AATCACT TTT AGTGATG TTTTTTCTAACTTAA TERM 209 295087 - 295099 + H 70 -6.3 -4.28383 | opp_overlap 295087, overlap 295085 AACCCACAAAATTAA TCACT TTT AGTGA TGTTTTTTCTAACTT TERM 210 295468 - 295509 + G 81 -8.1 -4.10744 | overlap 295473 TACAGAATGTAAGGG TCATTTTGACGAGCCTCAA TGTG TTGAGGTTTGTCCAGTTGA TTGTTGTTTGCCTGA COSY_0292 295340 - 295573 + | 4Fe-4S ferredoxin COSY_0293 296882 - 295767 - | aminotransferase, class V glcD 296934 - 298364 + | glycolate oxidase subunit GlcD COSY_0295 298364 - 298897 + | hypothetical protein TERM 211 299455 - 299432 - g 78 -7.4 -4.18119 | ATGAAACTATAGAAA CCCCACAAAA ACAA TGTTGCGGGG CTATTGACCAACATT glcF 298897 - 300021 + | glycolate oxidase iron-sulfur subunit GlcF rumA 300047 - 301366 + | RNA methyltransferase COSY_0300 302211 - 302492 + | hypothetical protein uvrD 304960 - 302807 - | DNA helicase II / ATP-dependent DNA helicase PcrA COSY_0302 305080 - 305265 + | hypothetical protein kamA 305270 - 306214 + | lysine 2,3-aminomutase COSY_0304 306781 - 306206 - | thioredoxin arsC 306794 - 307141 + | arsenate reductase gst 307830 - 307171 - | glutathione S-transferase nadD 308647 - 308015 - | nicotinate-nucleotide adenylyltransferase COSY_0308 309373 - 308651 - | hypothetical protein TERM 212 309510 - 309494 - R 83 -10.9 -2.62616 | TCAGTTGGGAGAGCA CGACACT GGC AGTGTCG GGGTCAGCGGTTCGA COSY_0311 310214 - 309885 - | hypothetical protein TERM 213 310752 - 310787 + H 100 -12.2 -4.76423 | opp_overlap 310755, overlap 310755 GATTCTACATTGATA AAATAGTATGGTTTTT TATA AAAAACCATACTATTC TTTTGTCTGTTTGTA TERM 214 310755 - 310784 + H 100 -13.9 -4.45187 | opp_overlap 310755, overlap 310752 TCTACATTGATAAAA TAGTATGGTTTTT TATA AAAAACCATACTA TTCTTTTGTCTGTTT TERM 215 310784 - 310755 - H 100 -13.9 -4.45083 | opp_overlap 310755 310752 TCTACATTGATAAAA TAGTATGGTTTTT TATA AAAAACCATACTA TTCTTTTGTCTGTTT TERM 216 311174 - 311162 - g 83 -4.8 -5.48054 | ATTAAAACTAAAAAA GCCA ATTCG TGGC TAGCAGAAGATGCCG rluD 310955 - 311899 + | ribosomal large subunit pseudouridine synthase D COSY_0313 312367 - 311951 - | hypothetical protein mutM 313164 - 312355 - | formamidopyrimidine-DNA glycosylase TERM 217 312744 - 312758 + g 83 -7.2 -4.7497 | opp_overlap 312743 TTTGATATAAATATC CATCAT AGA ATGATG TTTTTAATGGCTCAA COSY_0315 313220 - 313816 + | hypothetical protein TERM 218 314167 - 314147 - g 83 -10.5 -3.24709 | opp_overlap 314147 314149 314150 GAAAACAGTTATTAA TTGCTGCTG TTG CAGCAACAA TGTCAGTAGCTGCTA TERM 219 314150 - 314188 + G 81 -11 -2.64144 | opp_overlap 314147, overlap 314149 314147 AACAGTTATTAATTG CTGCTGTTGCAGCAAC AATGTCA GTAGCTGCTACAGCGG ATATTTCGATCACGG TERM 220 314918 - 314935 + G 75 -9.9 -2.54344 | overlap 314918 314917 314916 314920 CTGCTCGGGGTGGTA CAGCAAC TGCT GTTGCTG ATGTTAGTCATTTTA COSY_0316 314128 - 315183 + | hypothetical protein TERM 221 315233 - 315204 - f 85 -8.1 -4.57837 | opp_overlap 315179 315204 ATAGTGGTGTAAAAA CTAGATTAAATTT TTAA AAGTTTAATCTAG TTAGTTCTAGAACCC TERM 222 315204 - 315233 + F 90 -10.3 -3.44146 | opp_overlap 315204, overlap 315179 ATAGTGGTGTAAAAA CTAGATTAAATTT TTAA AAGTTTAATCTAG TTAGTTCTAGAACCC TERM 223 315246 - 315272 + F 100 -16 -5.50774 | opp_overlap 315246 TAGTTAGTTCTAGAA CCCCTAGTCTTA TTT TAAGGCTAGGGG TTTTTATTTCTTGTA TERM 224 315272 - 315246 - f 100 -13.8 -3.31461 | opp_overlap 315246 TAGTTAGTTCTAGAA CCCCTAGTCTTA TTT TAAGGCTAGGGG TTTTTATTTCTTGTA COSY_0317 315362 - 316033 + | hypothetical protein TERM 225 316486 - 316512 + GF 82 -10.2 -3.04461 | opp_overlap 316486 316489 TTGCTGATAATTTAA CTACAGCACTTA TTA TGGGTGCTGTGG TATTAGCAGTAGGTG TERM 226 316648 - 316661 + GF 77 -3.1 -5.48163 | GGCAAAATGGTATTG TTGGG TTTG CTCAA TTTTTTAGTTTGTTT TERM 227 316706 - 316720 + GF 76 -4.3 -5.0916 | TAACTTCGTTGTACC TGCAT CTATT ATGCA TTTTTCTATTAAAAA nhaD 315999 - 317396 + | Na+:H+ antiporter NhaD COSY_0319 317368 - 318087 + | Baf family transcriptional regulator trpS 318119 - 319315 + | tryptophanyl-tRNA synthetase COSY_0321 319318 - 320043 + | ribosomal large subunit pseudouridine synthase B TERM 228 320036 - 320066 + F 91 -8.6 -5.05228 | opp_overlap 320044, overlap 320040 TATTATTTAATGCTG TGGAGTAATATTAA TTT TTAATATTACTTTA TTTTTATACTTTAAT TERM 229 320040 - 320062 + F 100 -9.4 -5.00267 | opp_overlap 320044, overlap 320036 ATTTAATGCTGTGGA GTAATATTAA TTT TTAATATTAC TTTATTTTTATACTT ileS 320193 - 323060 + | isoleucyl-tRNA synthetase aroB 323061 - 324143 + | 3-dehydroquinate synthase COSY_0324 324150 - 324740 + | hypothetical protein TERM 230 324920 - 324941 + G 75 -8.1 -3.85698 | overlap 324923 CCATTACATATGTTC CAACGTCTT AGAG AAGATGTTG TTTCTGAGAAAGAGC gatC 324743 - 325030 + | glutamyl-tRNA (Gln) amidotransferase subunit C gatA 325032 - 326474 + | glutamyl-tRNA (Gln) amidotransferase subunit A gatB 326476 - 327906 + | glutamyl-tRNA (Gln) amidotransferase subunit B TERM 231 328109 - 328143 + T 75 -9.6 -2.61306 | opp_overlap 328113 328116, overlap 328116 TTTAAAGGTGTAGGA TAAACATTTATTCATA TAA TATGAATGATTGTTTA ATATTGTACTTATCT COSY_0328 329358 - 328729 - | hypothetical protein proS 329393 - 331075 + | prolyl-tRNA synthetase psd 331082 - 331894 + | phosphatidylserine decarboxylase COSY_0331 333128 - 331869 - | magnesium/cobalt efflux protein eno 334451 - 333165 - | enolase TERM 232 334840 - 334817 - H 70 -7.6 -3.45032 | opp_overlap 334820, overlap 334810 334820 CAACAAGAGTTAGAA CAATTCAAAC AATG GTTTGAATTA TCAAGCAATACCGAT TERM 233 334837 - 334820 - H 71 -7.1 -3.84639 | opp_overlap 334820, overlap 334810 334817 CAAGAGTTAGAACAA TTCAAAC AATG GTTTGAA TTATCAAGCAATACC COSY_0333 335016 - 335279 + | hypothetical protein COSY_0334 338957 - 335919 - | cation/multidrug efflux pump bipA 340847 - 339045 - | GTP-binding elongation factor family protein TERM 234 339609 - 339637 + g 73 -8.9 -3.1855 | opp_overlap 339607 339610, overlap 339600 TTTTTTCATCATAGT ACCTTGATGTTGA ATT TCTACATCAAGGC TTAAATCTTCGAACG TERM 235 339636 - 339610 - G 86 -12.4 -2.66316 | opp_overlap 339600 339609, overlap 339607 TTTTTCATCATAGTA CCTTGATGTTGA ATT TCTACATCAAGG CTTAAATCTTCGAAC TERM 236 339850 - 339866 + g 73 -9.5 -2.84732 | opp_overlap 339847 339850 TCTTTATCTAAACGA TCACGAA TAT TTCGTGA TGTGATAAATTTACC TERM 237 339866 - 339850 - G 73 -9.5 -2.94144 | opp_overlap 339850, overlap 339847 TCTTTATCTAAACGA TCACGAA TAT TTCGTGA TGTGATAAATTTACC ftsJ 340918 - 341550 + | cell division protein methyltransferase FtsJ ispB 341601 - 342572 + | octaprenyl-diphosphate synthase TERM 238 343281 - 343306 + G 73 -8.5 -3.19656 | gap 1 TTTAGCTGATCTTAG CA-CTGGTAATA CCG TATTACCAGATG TTAGTAAATCAATTT dinG 342577 - 344637 + | ATP-dependent DNA helicase DinG TERM 239 344679 - 344663 - T 70 -5.1 -4.7657 | TAAAAACGCCAAAAA GCTTTGT GTA ACAATGC CATTAAGGTTAATAT trkH 346095 - 344647 - | Trk system, membrane component trkA 347481 - 346108 - | potassium transporter peripheral membrane component COSY_0341 348063 - 347488 - | two-component response regulator COSY_0342 350238 - 348076 - | two-component sensor histidine kinase ppa 350851 - 351381 + | inorganic pyrophosphatase COSY_0344 351311 - 351952 + | methyltransferase coaD 351965 - 352441 + | pantetheine-phosphate adenylyltransferase TERM 240 353274 - 353259 - g 73 -4 -5.06451 | GATGAGTTTAAAAAA GACCAA GGTG TTGATC TAACCAATGATCCTA dnaK 352518 - 354422 + | chaperone protein DnaK dnaJ 354494 - 355591 + | chaperone protein DnaJ ruvA 356588 - 355980 - | holliday junction DNA helicase RuvA leuD 357193 - 356579 - | 3-isopropylmalate dehydratase small subunit leuC 358594 - 357194 - | 3-isopropylmalate dehydratase large subunit TERM 241 360080 - 360111 + G 82 -9.6 -3.59315 | gap 1, opp_overlap 360080 360079, overlap 360079 TTTATGGATTATAAG CTTGTTGAACATGCT TTG AGCATG-TCACCAAG TTTGAAAATGCTTAA TERM 242 360111 - 360080 - g 75 -9.6 -2.65298 | gap 1, opp_overlap 360079 360080, overlap 360079 TTTATGGATTATAAG CTTGTTGAACATGCT TTG AGCATG-TCACCAAG TTTGAAAATGCTTAA TERM 243 360228 - 360238 + G 70 -4 -4.89729 | CGGCACTCAAATATG TTCA AGG TGAA TTTTTAGATTTTATG asnB 358649 - 360421 + | asparagine synthetase (glutamine-hydrolyzing) rnhA 360411 - 360857 + | ribonuclease H COSY_0353 361415 - 360984 - | oligoketide cyclase/lipid transport protein TERM 244 361767 - 361748 - g 78 -7.8 -4.09818 | overlap 361749 AAGATTAATCAGAAA GGCGCTAC TATT GTAGCGCT TAAGCTTTATTGGAT TERM 245 361766 - 361749 - g 84 -11.3 -3.04806 | overlap 361748 AGATTAATCAGAAAG GCGCTAC TATT GTAGCGC TTAAGCTTTATTGGA smpB 361430 - 361915 + | SsrA-binding protein ndk 362435 - 362860 + | nucleoside diphosphate kinase COSY_0356 362910 - 363980 + | Fe-S-cluster redox enzyme TERM 246 364031 - 364057 + G 76 -3.8 -5.32699 | TAAAATGCTGGTTGT TACTTATTTTAG TTT CTAACGTAGGTA TTTTTTGGTATTTAA COSY_0357 363964 - 364272 + | hypothetical protein TERM 247 364801 - 364821 + G 73 -4.1 -4.90455 | opp_overlap 364801 TTGATAATTTTAAGA TTTCACT CAAGGCC AGTGAAA TTTTTATGACTGTGT TERM 248 365317 - 365303 - g 77 -8.6 -3.60818 | TGAAAATTTGGTAAA TGAGCT TGA AGCTCA GGTTAGGAATAGTCT ispG 364269 - 365345 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase COSY_0359 365826 - 365332 - | hypothetical protein dxs 367625 - 365823 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 249 366078 - 366056 - G 77 -10 -2.97297 | overlap 366055 ACTCAGTAATCAAAT CTTTGTCAAG TGG CTTAACAAAG CGCATATCAACTACA COSY_0361 369043 - 367688 - | U32 family peptidase TERM 250 369096 - 369077 - H 82 -9.4 -3.46088 | opp_overlap 369076, overlap 369075 ACAGTTTATTAAATA CCCTTATT GTAT AATAAGGG GTGATATGTTTACAA COSY_0362 369102 - 369689 + | hypothetical protein TERM 251 369964 - 369937 - g 71 -7.8 -3.61922 | opp_overlap 369937 AAGAGGTATTTCAAA GTTTGCCAACTT TTGC AAATTGGCCAAC TTTCCCTCAAATTTA COSY_0363 369759 - 370088 + | glutaredoxin-related protein purL 373984 - 370160 - | phosphoribosylformylglycinamidine synthase TERM 252 371845 - 371812 - G 79 -9.7 -3.14931 | overlap 371842 TCCAGTTTGCACTAA GGTTGATATGTTGAA TATC TTCAACATAACCACC AAGCATATTAGTGAG COSY_0365 374861 - 374121 - | hypothetical protein nadA 375840 - 374890 - | quinolinate synthetase aspS 377601 - 375847 - | aspartyl-tRNA synthetase COSY_0368 378209 - 377598 - | hypothetical protein TERM 253 377857 - 377869 + g 76 -7.7 -4.07568 | opp_overlap 377856 TATTCAACTAATACT GCTTC TTT GAAGC TTTTACCAGAAGGGC TERM 254 378248 - 378236 - R 70 -6.3 -4.26924 | opp_overlap 378223, overlap 378223 AATAGCAATAAAGAA TGCTA TTT TAGCA TAGTCATTATATTAT map 379045 - 378266 - | methionine aminopeptidase COSY_0370 380064 - 379036 - | hypothetical protein COSY_0371 380813 - 380205 - | hypothetical protein TERM 255 381521 - 381536 + r 70 -3.4 -5.40072 | opp_overlap 381521, overlap 381502 TGTTAAAGTATTAAA TAATAA TTAA TTATTA TTTTTTTGAAAAAAC TERM 256 381580 - 381570 - R 71 -5.4 -4.59653 | AATTAAAAATATAAA TCCT AAT AGGA TGGGGCGAGAAACGG TERM 257 381713 - 381727 + r 70 -7.8 -3.322 | TGAACGTGTGACCTA CGGCTT AGA AGGCCG TTGCTCTATCCAGCT dnaQ 383181 - 382510 - | DNA polymerase III epsilon subunit rpoZ 383251 - 383583 + | DNA-directed RNA polymerase omega subunit COSY_0377 386118 - 385459 - | hypothetical protein hemB 387146 - 386160 - | delta-aminolevulinic acid dehydratase TERM 258 386869 - 386885 + g 73 -3.7 -5.14563 | overlap 386872 TCTGGATTAAATGCC TCTTTAG CAT CTAATGA TTTTTTGATAGGCGG TERM 259 387701 - 387689 - g 81 -7.7 -4.34263 | TGGCAAGAATATAAA GACCA AAT TGGTC AGAAAAAAGGCGAGA TERM 260 388513 - 388525 + G 78 -7.7 -4.11751 | opp_overlap 388512 ACAGCTAGAAGAATG TGGTG AAG CACCA TTTTACACACTTGGT thiC 387191 - 389059 + | thiamine biosynthesis protein ThiC kdtA 390445 - 389195 - | 3-deoxy-D-manno-octulosonic-acid transferase obg 390499 - 391503 + | GTP1/Obg family GTP-binding protein proB 391500 - 392270 + | glutamate 5-kinase TERM 261 392335 - 392323 - g 71 -3.4 -5.1517 | opp_overlap 392323 AAAACAAATTAAAAA TGCA TTGAT TGCA CTTAATTATACTAAA folK 392264 - 392737 + | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase TERM 262 392904 - 392892 - g 75 -4.9 -4.87786 | TCAAGGTGACAAAAA TACAT TGG ATGTA AGTATGAGTGATATG panB 392734 - 393516 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 263 393861 - 393880 + G 83 -5 -5.52986 | ATTGGGCGCATTTTA TGCGGT AAAACTAG ACCGCA TTTTTTTAATGGGAT panC 393516 - 394364 + | pantothenate synthetase TERM 264 394466 - 394453 - g 70 -8.1 -3.15231 | overlap 394452 GTAGATATTGAAAAG GCAGG CACA CCTGC TGCTACAGTTATTTT COSY_0386 394357 - 394935 + | hypothetical protein COSY_0387 394980 - 395489 + | hypothetical protein thiL 395489 - 396418 + | thiamin-monophosphate kinase dksA 396865 - 396455 - | DnaK suppressor protein DksA TERM 265 397308 - 397292 - g 100 -10.9 -4.69656 | AATGAGGCAAGAAAA GCCAATC TTA GATTGGC AATTGCCACAACGAC COSY_0390 396956 - 397717 + | HAD family hydrolase COSY_0391 397701 - 398678 + | threonine dehydratase TERM 266 399291 - 399259 - f 78 -9.5 -3.07192 | opp_overlap 399270 AATTGGTTCAATAGA TTAGTTATATATATT TTT AATATATGTAACTAA GATAGACCAGTAATA TERM 267 399700 - 399667 - f 75 -8.5 -3.56246 | opp_overlap 399667, overlap 399663 CAAAAACAATATTAA TATGGTAATAATT AATCACAA AATTATTACCATA TTTTGTATCTTAAAT TERM 268 399667 - 399700 + F 85 -8.5 -4.68545 | opp_overlap 399663 399667 CAAAAACAATATTAA TATGGTAATAATT AATCACAA AATTATTACCATA TTTTGTATCTTAAAT TERM 269 399900 - 399878 - f 100 -12.2 -4.21827 | opp_overlap 399864 399881 399896 GTAAATATGCTAAAA TTATGCAGTT TCT AACTGCATAA TTACCCTATTTATGA TERM 270 399881 - 399897 + F 76 -9.5 -2.76249 | opp_overlap 399878, overlap 399864 399896 AATATGCTAAAATTA TGCAGTT TCT AACTGCA TAATTACCCTATTTA icd 399912 - 401159 + | isocitrate dehydrogenase COSY_0393 401846 - 402370 + | hypothetical protein TERM 271 402400 - 402420 + F 80 -8.3 -4.36595 | opp_overlap 402400 402403 TTAAGAATCAATAAA GATCATCCT TGT AGGGTGGTC TTTTGCGTTTGAGTA TERM 272 403829 - 403806 - g 71 -5.4 -4.63486 | ATTGTGGGAATAAAA TCAATATTGA ACAA TCAATATGGA AGAGTATATCAATAG COSY_0395 403766 - 405025 + | hypothetical protein aspB 406247 - 405069 - | aspartate aminotransferase TERM 273 405357 - 405334 - G 71 -6.8 -4.09805 | GCATCAACAATGAAA TCATGCCTTT TTTT AAAAGCACGA ACCATTATGTTGATA TERM 274 406408 - 406422 + H 71 -8.6 -2.99596 | TGATGGTGATAAGTT CCAAGT ATT ACTTGG TGTAATTGGTTTAGG TERM 275 407034 - 407058 + G 87 -10.2 -3.85092 | TAGAAACTAGTGGTA GCATTAACAT ACAAG ATGTTAATGC TTTAGTATCAATAGT COSY_0397 406724 - 407365 + | organic radical activating enzyme COSY_0398 407890 - 407366 - | hypothetical protein aroC 409234 - 408137 - | chorismate synthase TERM 276 409760 - 409774 + H 70 -7.8 -3.322 | opp_overlap 409756 TGAACACACGACCTA CCGCTT AGG AGGCGG TTACTCTATCCAGCT pyrF 410000 - 410695 + | orotidine-5'-phosphate decarboxylase TERM 277 411761 - 411742 - g 87 -10.8 -3.34043 | TTGATTATGGTAGAA CATTGGCA TTAT TGCCAATG GTAGGTAATGTTTCG COSY_0403 411117 - 412310 + | hypothetical protein pdxH 412310 - 412948 + | pyridoxamine-phosphate oxidase aroE 413740 - 412937 - | shikimate 5-dehydrogenase TERM 278 413686 - 413650 - G 100 -18.3 -3.12351 | opp_overlap 413650 413651 413658, overlap 413658 TTTTGTCATAGCTAA TTTCAAAACCAGTTTGC TTA GCAAACTGGTTTTGAAT ATTTGGCGATAAACT TERM 279 413650 - 413687 + g 100 -16.7 -3.57462 | gap 1, opp_overlap 413650 413658, overlap 413651 413658 TTTTGTCATAGCTAA T-TTCAAAACCAGTTTGC TTA GCAAACTGGTTTTGAATA TTTGGCGATAAACTA TERM 280 413651 - 413685 + g 100 -21.8 -3.36515 | opp_overlap 413650 413658, overlap 413650 413658 TTTGTCATAGCTAAT TTCAAAACCAGTTTGC TTA GCAAACTGGTTTTGAA TATTTGGCGATAAAC TERM 281 413678 - 413658 - G 100 -14.1 -4.19953 | opp_overlap 413651 413650 413658, overlap 413650 TAGCTAATTTCAAAA CCAGTTTGC TTA GCAAACTGG TTTTGAATATTTGGC TERM 282 413658 - 413678 + g 100 -14.1 -4.323 | opp_overlap 413658 413650, overlap 413651 413650 TAGCTAATTTCAAAA CCAGTTTGC TTA GCAAACTGG TTTTGAATATTTGGC COSY_0406 415484 - 413763 - | hypothetical protein TERM 283 414723 - 414707 - G 73 -8.1 -3.54307 | overlap 414697 AAGAGTGTTCTGAAA CATCAAA AAA TTTGATG CGATCTAAGTAGTGT TERM 284 415358 - 415370 + g 79 -4.1 -5.33124 | GAGAGATCTTGCCTC GGTAA ATA TTGCC TTTTGTTTTCTTATT COSY_0407 416543 - 415824 - | oxidoreductase COSY_0408 416531 - 417652 + | hypothetical protein bacA 417670 - 418464 + | undecaprenol kinase lpxC 420095 - 421006 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 285 421334 - 421310 - g 77 -9.4 -3.21099 | opp_overlap 421310 GCCTGGTATTACCAA TGCAGTTACA GGTAT TGCAACTGCA TATATGGATTCTATT TERM 286 421795 - 421826 + G 70 -8.1 -3.19442 | AAACATTGATGGGCT TGGGTGCTTATCC AGCTAC GGATAAGCAATCA TTAGGTATGTTAGGT TERM 287 422450 - 422434 - g 73 -9.5 -2.82082 | opp_overlap 422432, overlap 422449 AGGAATTATCAACTA TGTTGCA ATA TGCAACA CCTGTTAAGATTATT ilvI 421071 - 422804 + | acetolactate synthase large subunit ilvH 422801 - 423298 + | acetolactate synthase small subunit ilvC 423322 - 424326 + | ketol-acid reductoisomerase TERM 288 425005 - 425019 + G 79 -4.2 -5.28281 | TTATTGTTATTATTT TAGAGC CTA GCGCTA TTTTATTTGTTTTCT pssA 424377 - 425123 + | phosphatidylserine synthase TERM 289 425228 - 425209 - f 90 -10.8 -3.40403 | opp_overlap 425209 TTGTTTTTATTATAA CTATTGCC ATAT GGCAATAG TTATCTGCGCACTAT TERM 290 425209 - 425228 + F 91 -10.8 -3.49102 | opp_overlap 425209 TTGTTTTTATTATAA CTATTGCC ATAT GGCAATAG TTATCTGCGCACTAT TERM 291 426572 - 426561 - g 70 -2.2 -5.3658 | ATGATAAAAAGAAAA CAGC AACG GCTA ATACTTCAGGTGCAG leuA 425300 - 426835 + | 2-isopropylmalate synthase TERM 292 426932 - 426906 - g 70 -2.4 -5.28481 | opp_overlap 426877, overlap 426912 TATTCAAGCAAAAAA TCAAGATTTAAA TGT TTTAAAAATTGA TATAAAATGTTTAGT COSY_0416 426832 - 427251 + | hypothetical protein TERM 293 427363 - 427389 + G 71 -5.2 -4.47611 | AAATTATGGAAGCTT TAGCAGTATCAA ATA TTGACACTACTA TCTTTTTTTATAATC COSY_0417 427239 - 427931 + | hypothetical protein argF 428827 - 427928 - | ornithine carbamoyltransferase TERM 294 428670 - 428659 - G 77 -5.8 -4.65933 | CAGCTTCAAAAGAAA CACG CGTT CGTG TAGAAGATTTATCAA TERM 295 428877 - 428849 - R 73 -9.1 -2.91276 | overlap 428848 428851 CTCCTGCCTATAAAG TATTGATCAAGTT ACT AACTTTATCAATA AGAATATCAGCATCA argD 429998 - 428841 - | acetylornithine aminotransferase TERM 296 429036 - 429054 + g 77 -5.4 -4.88295 | ACCTTTTGAGCGAAT TTCAAATA CTT TGTTTGAA TTTTTAAGTTTGTTT COSY_0420 430269 - 430066 - | hypothetical protein TERM 297 430315 - 430333 + H 75 -5.4 -5.0916 | opp_overlap 430315 CGTCAGTATTATACA CTTTAAAT AAG ATTTAAGG TTTTTGTCTTAAAAG TERM 298 430365 - 430399 + H 89 -9 -4.57341 | opp_overlap 430368, overlap 430353 GTATAAATTACCTTA TAATTTATATTAAAAT TTT ACTTTAATATAAATTA TTTTTCAAAGAAATT TERM 299 430396 - 430368 - H 74 -8.5 -3.3573 | opp_overlap 430353 430365 TAAATTACCTTATAA TTTATATTAAAAT TTT ACTTTAATATAAA TTATTTTTCAAAGAA COSY_0421 430426 - 430734 + | sigma-54 modulation protein mgtE 430781 - 432112 + | magnesium transporter MgtE COSY_0423 433805 - 432432 - | phosphomannomutase rseC 433862 - 434230 + | sigma-E factor regulatory protein RseC TERM 300 436022 - 436032 + G 70 -8.2 -3.29144 | opp_overlap 435995 TCTGATTGGATTGCA GCCG CCA CGGC TTATGCAACGCATAA aceE 434291 - 436942 + | pyruvate dehydrogenase subunit E1 pnp 439124 - 437037 - | polynucleotide phosphorylase/polyadenylase TERM 301 437741 - 437719 - G 73 -7 -3.90112 | opp_overlap 437719 437717 437723 TTTTCTTTAACTAAA CCCATAGCAA TGC CTGCTATTGG TGCTTTTATTGGTAC guaB 441299 - 439839 - | IMP dehydrogenase TERM 302 440247 - 440231 - G 71 -8.7 -3.06492 | GCATTGAGCCTAACA TGACGCA GTA TGCGCCA GCAGCTAATGCCTTT TERM 303 440729 - 440772 + g 77 -9.8 -3.10098 | opp_overlap 440734 440739, overlap 440728 440739 CATTAATCATACCTT TAAGATTGAACGTATCATCA GTTA TGATGATACGTTCAATACGA TGCTTTTGCAATAAT TERM 304 440767 - 440734 - G 100 -18.5 -3.05521 | opp_overlap 440729 440728 440739, overlap 440739 ATCATACCTTTAAGA TTGAACGTATCATCA GTTA TGATGATACGTTCAA TACGATGCTTTTGCA TERM 305 440762 - 440739 - G 91 -12.6 -3.18728 | opp_overlap 440729 440728 440739, overlap 440734 ACCTTTAAGATTGAA CGTATCATCA GTTA TGATGATACG TTCAATACGATGCTT TERM 306 440739 - 440762 + g 87 -12.6 -3.07291 | opp_overlap 440739 440734, overlap 440729 440728 ACCTTTAAGATTGAA CGTATCATCA GTTA TGATGATACG TTCAATACGATGCTT COSY_0428 441958 - 441299 - | hypothetical protein valS 444702 - 441955 - | valyl-tRNA synthetase TERM 307 442377 - 442358 - G 80 -9.4 -3.61178 | opp_overlap 442360 GGTAGCCATTTTAAA GGTGAAAT ATTC ATTTCACC ACGAATTTGTCGAAT TERM 308 442729 - 442748 + g 70 -2.2 -5.32599 | AATACGATAGTCAGA TAAATGCT TTTC AACATTTA TTTTTGTATTTTGTA TERM 309 444591 - 444601 + g 74 -5.4 -4.78107 | opp_overlap 444591, overlap 444585 GTGGTGGTAGCATAA TGCA ATA TGCA TTTTTGCTAGTGGTG COSY_0430 445450 - 445145 - | hypothetical protein dnaX 447014 - 445443 - | DNA polymerase III tau and gamma subunit TERM 310 445852 - 445868 + g 83 -2.3 -5.86332 | AGTATTTTTGGTTTT GTAATAT CTG ATATTTC TTTTTTTTCAATTAG TERM 311 446172 - 446145 - G 71 -8.6 -3.07622 | opp_overlap 446148, overlap 446148 AGATATTTTATGGAA CAATGAACTTAA ATCT TTAAGTGCATTG TTAAGGTTTTCGCCA TERM 312 447729 - 447705 - R 90 -11.7 -3.03441 | opp_overlap 447711, overlap 447707 447711 447716 TAGTATGTTTTAAGA CATTAATTGAA TAA TTCAATTAATG CCAAACCTTAGATGC TERM 313 447727 - 447707 - R 71 -8.5 -3.07344 | opp_overlap 447711, overlap 447705 447711 447716 GTATGTTTTAAGACA TTAATTGAA TAA TTCAATTAA TGCCAAACCTTAGAT COSY_0432 449113 - 448280 - | aminotransferase, class IV COSY_0433 450240 - 449113 - | D-alanyl-D-alanine carboxypeptidase rodA 451913 - 450774 - | rod shape-determining protein RodA COSY_0435 452308 - 451910 - | hypothetical protein COSY_0436 452355 - 452804 + | hypothetical protein gltX 452817 - 454184 + | glutamyl-tRNA synthetase glnD 454200 - 456719 + | [protein-PII] uridylyltransferase TERM 314 457035 - 457045 + G 71 -5.4 -4.62085 | opp_overlap 457018 457015 457008, overlap 457011 GAATTCGTGGCATTC CAAC TAT GTTG TTATTTTTTGAGGGT trxA 456806 - 457132 + | thioredoxin 1 rho 457248 - 458510 + | transcription termination factor Rho COSY_0441 458647 - 459720 + | hypothetical protein folE 459862 - 460260 + | GTP cyclohydrolase I TERM 315 461099 - 461113 + G 85 -4.2 -5.71983 | overlap 461100 TGTATTTTTATGGCA GGCTCA AAA TGAGCG TTTTTTTGTGATTAA TERM 316 461100 - 461112 + G 76 -7.7 -4.01563 | overlap 461099 GTATTTTTATGGCAG GCTCA AAA TGAGC GTTTTTTTGTGATTA pcnB 460269 - 461420 + | poly(A) polymerase xseB 461790 - 462014 + | exodeoxyribonuclease VII small subunit TERM 317 462645 - 462655 + G 72 -2.6 -5.252 | overlap 462654 CAATAAGGATCAGAC TATT TTA AATA TTTTTTCTAAAGATA ispA 462064 - 462918 + | geranyltranstransferase fabH 463859 - 462915 - | 3-oxoacyl-[acyl-carrier-protein] synthase III plsX 464871 - 463852 - | fatty acid/phospholipid synthesis protein PlsX TERM 318 464823 - 464804 - G 71 -8.6 -3.04322 | TTTAATGCTTTAATA CCTGCTAC AATA GTAACAGG TATGCCATAATCTCC rpmF 465074 - 464877 - | 50S ribosomal protein L32 COSY_0449 465592 - 465098 - | hypothetical protein plsC 466506 - 465805 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 319 467391 - 467426 + G 82 -9.8 -3.66288 | opp_overlap 467394, overlap 467394 GTTTTGGTAGGGCAA TAACACTTGACCTTGC TAAA GCAGGTGCAAGTGTTA TTATGTTAGGGCGTG TERM 320 467394 - 467423 + G 73 -7.1 -3.9644 | opp_overlap 467394, overlap 467391 TTGGTAGGGCAATAA CACTTGACCTTGC TAAA GCAGGTGCAAGTG TTATTATGTTAGGGC COSY_0451 467297 - 468049 + | oxidoreductase suhB 468966 - 468163 - | myo-inositol-1(or 4)-monophosphatase TERM 321 469003 - 468989 - g 76 -2.8 -5.54079 | opp_overlap 468989, overlap 469000 GGAAAAATGAAAAAA GGAATA AAT TATACC TTTGATAAGGTACGT COSY_0453 468980 - 469723 + | RNA methyltransferase TERM 322 469760 - 469706 - T 75 -7.5 -4.01135 | opp_overlap 469706 469706 469709 469715, overlap 469707 469716 CTTAAGAATATCAAA CCTTTTAAAAGGTTATAAAATCC CCATTTTCT GGTTTTTATAACCCTTTAAATGA TTAATTGATCAGCTT TERM 323 469759 - 469707 - T 74 -8.8 -2.99958 | opp_overlap 469706 469706 469709 469715, overlap 469706 469716 TTAAGAATATCAAAC CTTTTAAAAGGTTATAAAATCC CCATTTTCT GGTTTTTATAACCCTTTAAATG ATTAATTGATCAGCT htpG 471611 - 469761 - | heat shock protein 90 TERM 324 472075 - 472103 + H 87 -10.5 -3.16267 | overlap 472084 TCATAATTTATGTTT TACTAAAGAGTTC TTA GGACTTTTTAGTA TTAAATCTAATTAAA COSY_0455 472193 - 472729 + | hypothetical protein hemF 472726 - 473652 + | coproporphyrinogen III oxidase COSY_0457 473642 - 473866 + | hypothetical protein TERM 325 474376 - 474394 + G 84 -5.3 -5.5762 | TGGTGATACCGCATA TTTTGGC AATGA GCCAGAA TTTTTTATCTTTGAT TERM 326 475367 - 475352 - g 73 -4 -5.10163 | opp_overlap 475361, overlap 475360 AATCTTAAAATAAAA GAAGTA ACTG CACTTC GTGCTTCTCCTCATC glnA 473999 - 475414 + | glutamine synthetase TERM 327 475461 - 475434 - f 87 -11.4 -3.02211 | opp_overlap 475439, overlap 475439 TAATTTTAAATGAGA TAAAAGCCGTGT ATTT ACACGGCTTTTT TAAAATTTGAATTAA TERM 328 475439 - 475456 + F 100 -11.3 -5.12707 | opp_overlap 475434 475439 TTAAATGAGATAAAA GCCGTGT ATTT ACACGGC TTTTTTAAAATTTGA TERM 329 475456 - 475439 - f 100 -11.3 -4.6468 | opp_overlap 475439, overlap 475434 TTAAATGAGATAAAA GCCGTGT ATTT ACACGGC TTTTTTAAAATTTGA bioB 475512 - 476480 + | biotin synthetase murG 477465 - 476443 - | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 330 477451 - 477469 + g 76 -3.8 -5.28942 | overlap 477453 AATAAGGATTTTTTT AGCTGTGT TAA ACACAGTG TTTTTGTTTAGAATA TERM 331 477453 - 477467 + g 85 -8.6 -4.27026 | overlap 477451 TAAGGATTTTTTTAG CTGTGT TAA ACACAG TGTTTTTGTTTAGAA COSY_0461 478303 - 479916 + | ABC transporter ATP-binding protein COSY_0462 480049 - 480654 + | riboflavin synthase subunit alpha ribAB 480638 - 481711 + | bifunctional riboflavin biosynthesis protein RibBA ribH 481722 - 482225 + | riboflavin synthase beta chain nusB 482228 - 482653 + | N utilization substance protein B metH 486469 - 482789 - | 5-methyltetrahydrofolate--homocysteine methyltransferase TERM 332 482938 - 482897 - G 73 -8.1 -3.6692 | gap 1, overlap 482895 482898 482919 TGCCACGCCAAAATA TCTAGCATCAG-GGTTCGCA AAA TACCAACCGCTGACGCTAGC AGTTGGTAGCATGGC TERM 333 482937 - 482898 - G 83 -11.6 -2.79831 | gap 1, overlap 482897 482895 482919 GCCACGCCAAAATAT CTAGCATCAG-GGTTCGCA AAA TACCAACCGCTGACGCTAG CAGTTGGTAGCATGG TERM 334 482946 - 482919 - G 93 -10.7 -4.08216 | opp_overlap 482938, overlap 482898 482897 482895 TCAGGGTTCGCAAAA TACCAACCGCT GACGCT AGCAGTTGGTA GCATGGCATACGAGC TERM 335 486388 - 486430 + g 77 -5.9 -4.71186 | opp_overlap 486402, overlap 486392 TTCCCATAGCACCAT CAAGTACTAAAATTCTTTT ATTTA AAAGGGATTTTAATATTTG TTTTATATTCATAAT COSY_0467 486758 - 487144 + | hypothetical protein TERM 336 487162 - 487191 + T 100 -15.3 -3.19293 | opp_overlap 487152 487169, overlap 487169 TTGAATTATGATTCA TAAAAAACCAGCA CTAG TGCTGGTTTTTTA TTGCCTATTCCCGTT TERM 337 487184 - 487169 - T 100 -9 -5.28778 | opp_overlap 487169 487162 ATGATTCATAAAAAA CCAGCA CTAG TGCTGG TTTTTTATTGCCTAT TERM 338 487169 - 487184 + T 100 -9 -5.49234 | opp_overlap 487169, overlap 487162 ATGATTCATAAAAAA CCAGCA CTAG TGCTGG TTTTTTATTGCCTAT ssb 487705 - 487208 - | single-strand DNA binding protein COSY_0469 488895 - 487720 - | major facilitator family transporter TERM 339 488025 - 488046 + g 80 -10.3 -3.10715 | ATGAAGTGTATGTGA GTTCTGTTT GATA AAACAGAAC TTGGCTAATAATCAA TERM 340 488190 - 488200 + g 73 -4 -5.07652 | opp_overlap 488196 488198 AACTATCTTTAATGT CAAT AAT ATTG TTTTCTTTTAAAACA comL 489681 - 488914 - | competence lipoprotein ComL spoT 489779 - 491881 + | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase COSY_0472 491956 - 492150 + | hypothetical protein TERM 341 492225 - 492249 + G 71 -6.5 -4.22276 | opp_overlap 492225 492230, overlap 492222 492230 GTCACTATTTTCAAA CAGGAGGAAAA TAC TTTTCCTATTG TTATTTCTGATTTTT tolB 492147 - 493421 + | biopolymer transport protein TolB pal 493433 - 494002 + | peptidoglycan-associated lipoprotein TERM 342 494130 - 494112 - g 79 -4.6 -5.33848 | ATCATAATCAAAAAA TTAAGCGA TTG TTGCTTAA AAATAAAATTTTAAT COSY_0475 494009 - 494674 + | hypothetical protein COSY_0476 494687 - 495976 + | hypothetical protein nadE 497723 - 496092 - | NAD+ synthase (glutamine-hydrolysing) TERM 343 496675 - 496705 + g 73 -7.8 -3.80733 | opp_overlap 496675 CTGTCTACTATGATA TGAATGTTGATT TCATGAT AGTCAACATTCA TTGTTGTAGCCTGAA hemH 498452 - 499435 + | ferrochelatase TERM 344 499511 - 499466 - f 83 -7.9 -4.57482 | opp_overlap 499474, overlap 499468 TTATCTATAAATAAA TTGTAAAATACGCTATTTTTA TCTA TAAATATATCGTATTTTACGA GCATTATTATGTAGT TERM 345 499509 - 499468 - f 81 -10.5 -2.59537 | opp_overlap 499474, overlap 499466 ATCTATAAATAAATT GTAAAATACGCTATTTTTA TCTA TAAATATATCGTATTTTAC GAGCATTATTATGTA nrdA 499543 - 501819 + | ribonucleotide-diphosphate reductase subunit alpha nrdB 501835 - 502971 + | ribonucleotide-diphosphate reductase subunit beta COSY_0481 502980 - 503243 + | hypothetical protein TERM 346 503403 - 503387 - T 71 -6.7 -4.16814 | opp_overlap 503387 503386 503390, overlap 503390 CTATTATATAAATAA TAAGTAT GAT ATACTTA CTTTGATTCTAATAA COSY_0482 504097 - 503429 - | hypothetical protein rnt 504951 - 504370 - | ribonuclease T COSY_0484 505366 - 504941 - | hypothetical protein TERM 347 505676 - 505659 - g 77 -8.5 -3.5594 | overlap 505646 AACGCAGGTGGTAAA GGTGTTA TCTT TAACACC ATTACCATATCAGAT TERM 348 506235 - 506257 + G 83 -10.6 -3.16619 | opp_overlap 506233, overlap 506231 506225 ATCACTGTAATTATT GCATTGGGTG GCT CAACCAATGC TGTATTGCATTTAAT ilvD 505443 - 507107 + | dihydroxy-acid dehydratase vacB 509290 - 507173 - | ribonuclease R TERM 349 507893 - 507879 - G 72 -2.8 -5.37043 | opp_overlap 507882 ATTCGATATAAAAAA TCTTCA TTG TGATGA TTTAAAAATTTTGCT TERM 350 509184 - 509200 + g 88 -5.9 -5.75342 | opp_overlap 509184 AATAAATCATATAAT TCATGTA GTG TACGTGA TTTTTTTTCAAAAAA purA 510610 - 509294 - | adenylosuccinate synthetase TERM 351 509963 - 509985 + g 84 -5.6 -5.48063 | overlap 509964 AAATAGTATATTTTC ATCATTAGCA ATA TGCTGATGAA TTTTTTCTGTTACAT TERM 352 509964 - 509984 + g 81 -9.1 -3.87211 | overlap 509963 AATAGTATATTTTCA TCATTAGCA ATA TGCTGATGA ATTTTTTCTGTTACA hisZ 511587 - 510637 - | ATP phosphoribosyltransferase regulatory subunit hflC 512457 - 511600 - | membrane protease subunit HflC TERM 353 511637 - 511625 - G 71 -7.7 -3.56704 | opp_overlap 511625 511623 TGTGGATTAAAGTAA CGGAA GAA TTCCG TGTTTGGATTAAGAA hflK 513626 - 512457 - | membrane protease subunit HflK TERM 354 513496 - 513530 + g 73 -4.5 -4.94262 | TTAGGTGTAATTGTA TTTGATGATTTCTTA CCATT TAAAAAACCATCAAA TTTATTTTTCATATC TERM 355 515741 - 515720 - g 70 -8.1 -3.1552 | opp_overlap 515719 515710 515708, overlap 515723 GCTTATCCATTAACA CAACAAACA CATG TGTTTGCTG GTATTAATGGATCTA COSY_0491 513749 - 515980 + | hypothetical protein COSY_0492 515970 - 516863 + | hypothetical protein COSY_0493 516864 - 517607 + | RNA methyltransferase TERM 356 517847 - 517861 + T 76 -4.2 -5.41941 | opp_overlap 517842 517847, overlap 517842 TTTAATTGAATACGA TGTCCC CAT GGTACA TTTTTATTTCCTTTA COSY_0494 519018 - 517828 - | hypothetical protein TERM 357 517976 - 517944 - G 100 -12.2 -4.11623 | opp_overlap 517950 CATCAGTAAAGTAAA TTAACACGCTAGAA GCAAT TTCTTGCGTGTTAA CATGATCAAATACAG TERM 358 518768 - 518755 - G 76 -6.7 -4.49311 | ACCACGACGAGAAAA GTGCA TTAG TGCAC AATGTAGGACTTCAT COSY_0495 520133 - 519093 - | hypothetical protein COSY_0496 520197 - 520475 + | hypothetical protein lipB 520482 - 521096 + | lipoate-protein ligase B TERM 359 521237 - 521225 - g 75 -4.7 -4.90266 | TTGATCAACTAAAAA GCACG CTT CGGGC GCAGAAATTATTTAC TERM 360 521561 - 521542 - g 83 -8 -4.39287 | overlap 521549 TTAAGTACACCAAAA GTTAAGAT TGAA ATCTTAAC TCCAGATTTCAAAGG lipA 521074 - 522021 + | lipoyl synthase TERM 361 522058 - 522034 - T 100 -10.3 -4.9218 | opp_overlap 522034 522029 522028 522037 522040 TAGTGATTATAAAAA GAATAATTTAT ATC ATAAATTATTC TTATCTGTTTTCTTT TERM 362 522034 - 522058 + T 95 -10.3 -3.90424 | opp_overlap 522034, overlap 522029 522028 522037 522040 TAGTGATTATAAAAA GAATAATTTAT ATC ATAAATTATTC TTATCTGTTTTCTTT COSY_0499 525492 - 522046 - | multidrug efflux system TERM 363 523616 - 523634 + g 82 -7.4 -4.55118 | overlap 523618 ACGACTTCTGGTACA TTGCGCAA TAC TTGCGCCA TTTTATGTAAAGTTG TERM 364 523618 - 523632 + g 75 -10 -2.58686 | overlap 523616 GACTTCTGGTACATT GCGCAA TAC TTGCGC CATTTTATGTAAAGT TERM 365 524024 - 524005 - G 75 -10 -2.62175 | opp_overlap 524005, overlap 524004 GCCTAATATAGGAAT TGGAGCCA TATA TGGCCCCA TCATTCCACTAACTG TERM 366 525415 - 525404 - G 70 -4.4 -4.71776 | opp_overlap 525404, overlap 525399 GAAGAGGTAATAAAA GCTT TAGT AAGC TTTCCAGCAATACCC COSY_0500 526674 - 525499 - | multidrug efflux system TERM 367 525722 - 525705 - G 83 -11.3 -2.79023 | opp_overlap 525704 525703 525703, overlap 525702 CAATTTCAGGAATGA CTGGCGT TAAT ACGCCAG AATCTGTTTCAAAAA pdxA 526875 - 527873 + | 4-hydroxythreonine-4-phosphate dehydrogenase ksgA 527854 - 528618 + | dimethyladenosine transferase apaG 528602 - 528973 + | ApaG TERM 368 529049 - 529068 + G 86 -5 -5.75945 | AAAAAATTAAATTCT CAAGCGAT AAAG ATCGATTG TTTTTTTTAGGAGAT apaH 528973 - 529770 + | diadenosine tetraphosphatase dapF 530582 - 529767 - | diaminopimelate epimerase TERM 369 530847 - 530810 - H 79 -5.1 -5.46629 | gap 1, opp_overlap 530815 530823, overlap 530814 530815 AATATGCTAAAAAAA CACATCGTAAGAATTCAA CTT TTGAATTCTCACACT-TG TCGAGGGGGTGGTAT TERM 370 530844 - 530814 - H 70 -7 -3.76885 | opp_overlap 530815 530823, overlap 530810 530815 TGCTAAAAAAACACA TCGTAAGAATTCAA CTT TTGAATTCTCACAC TTGTCGAGGGGGTGG TERM 371 530843 - 530815 - H 82 -10.5 -2.85047 | opp_overlap 530815 530823, overlap 530814 530810 GCTAAAAAAACACAT CGTAAGAATTCAA CTT TTGAATTCTCACA CTTGTCGAGGGGGTG TERM 372 531518 - 531538 + H 75 -5.4 -5.08169 | gap 1, opp_overlap 531493, overlap 531534 531536 TGAAAAAATTTCAAC CTC-GCCCC TAAT GGGGTAGAG TTTTTTCAAATCTCT COSY_0506 532101 - 533438 + | membrane-associated Zn-dependent protease TERM 373 534683 - 534664 - g 73 -4.4 -4.8622 | TTTCTGAAGTAAAAA TTCAAGTT TCAA AACTTAAA GACATTGAAGATAAA TERM 374 535045 - 535029 - g 75 -5.1 -4.92757 | opp_overlap 535029 GTACCAATAACAAAA GCAACAA GAA TTGGTGC TAACTTAAGAGCTTC COSY_0507 533454 - 535745 + | surface antigen family protein TERM 375 535956 - 535979 + G 73 -8.4 -3.62572 | overlap 535957 AAGCTGGTGTTGTTA TTCTTAATAA AGAT TTATTAAGAA TTTGCCCTACTAATG lpxD 535784 - 536782 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase fabZ 536784 - 537227 + | 3R-hydroxymyristoyl ACP dehydrase lpxA 537253 - 538044 + | UDP-N-acetylglucosamine acyltransferase TERM 376 538544 - 538556 + G 71 -7.7 -3.57309 | CATTTATAATCATTT TGCAG TAC CTGCA TTTACACCAGTTTTA TERM 377 538660 - 538674 + G 73 -4.2 -4.88918 | GGGGAGTATTTTTTG GTGGTG TTG CACAAC TTTTATTTCAAATAC mviN 538062 - 539588 + | virulence factor MviN COSY_0512 539588 - 539857 + | hypothetical protein gmk 539850 - 540461 + | guanylate kinase rpoH 540511 - 541344 + | DNA-directed RNA polymerase sigma-32 factor TERM 378 541431 - 541444 + G 70 -8.1 -3.16564 | TATTCGCCCCCTTCA CGACC GTGT GGTCG TTCGTAGAGTAGAAG TERM 379 541481 - 541469 - g 89 -7.7 -5.31091 | opp_overlap 541469 TAGAAGAAAAGAAAA CCACT TCC AGTGG TTTAATTATTCCTGA TERM 380 541469 - 541481 + G 78 -7.7 -4.09805 | opp_overlap 541469 TAGAAGAAAAGAAAA CCACT TCC AGTGG TTTAATTATTCCTGA TERM 381 541578 - 541557 - g 91 -4.5 -5.81032 | gap 1, overlap 541560 TAATGGTAAAAAAAA TGACAATGGC GAT ACCATTG-CA TTAGACGTAACAATC groES 541411 - 541698 + | chaperonin GroES groEL 541711 - 543354 + | chaperonin GroEL TERM 382 543418 - 543360 - f 100 -27.5 -3.55122 | gap 1, opp_overlap 543381, overlap 543362 543381 TATGATGTAAATCAA CATTGCTCTATTATAAAAAAAGCCCCAT CTTT ATGGGGCTTTTTTTATAATAGAGCAAT- CTCCCAATGGAGAGT TERM 383 543417 - 543362 - f 100 -32.6 -3.34609 | opp_overlap 543381, overlap 543360 543381 TGATGTAAATCAACA TTGCTCTATTATAAAAAAAGCCCCAT CTTT ATGGGGCTTTTTTTATAATAGAGCAA TCTCCCAATGGAGAG TERM 384 543398 - 543381 - f 100 -11.3 -5.67063 | opp_overlap 543381, overlap 543362 543360 TCTATTATAAAAAAA GCCCCAT CTTT ATGGGGC TTTTTTTATAATAGA TERM 385 543381 - 543398 + F 100 -11.3 -5.67063 | opp_overlap 543362 543360 543381 TCTATTATAAAAAAA GCCCCAT CTTT ATGGGGC TTTTTTTATAATAGA TERM 386 543465 - 543438 - f 85 -10.2 -3.21288 | opp_overlap 543440 543441, overlap 543436 543449 CAATGGAGAGTAACA TAGTTTAATAAT TTAA ATTATTAAACTA TCTAAAAGATTTTAA TERM 387 543722 - 543737 + G 74 -3.2 -5.26316 | opp_overlap 543722 AGCACAGCATTAAAA GACCCT ATTC ATGGTC TTTTTTATGGCGTGG TERM 388 543893 - 543877 - g 100 -10.9 -4.67234 | opp_overlap 543877 ACTTAATGCTAAAAA CTCCTTC TCT GAAGGAG TTAACTGTATCGCTT TERM 389 543877 - 543893 + G 86 -10.9 -3.16743 | opp_overlap 543877 ACTTAATGCTAAAAA CTCCTTC TCT GAAGGAG TTAACTGTATCGCTT COSY_0517 543491 - 544732 + | hypothetical protein TERM 390 544778 - 544747 - f 100 -8.9 -5.00616 | opp_overlap 544746 544754, overlap 544754 GTTTTTGTTAAAAAA TAAAAAATCCTCG TCTTTT CGAGGATTTTTTG GTATGATACTTGATA TERM 391 544754 - 544771 + F 87 -7 -5.23316 | opp_overlap 544754 544747, overlap 544746 TTAAAAAATAAAAAA TCCTCG TCTTTT CGAGGA TTTTTTGGTATGATA TERM 392 544771 - 544754 - f 100 -7 -6.04324 | opp_overlap 544746 544754, overlap 544747 TTAAAAAATAAAAAA TCCTCG TCTTTT CGAGGA TTTTTTGGTATGATA TERM 393 545223 - 545204 - g 71 -6.4 -4.27192 | overlap 545206 AAATTTGGATCAAAA GAGATGCT AAAG AGCATCAC ATAACATTCTCAAAT TERM 394 545221 - 545206 - g 73 -7.6 -3.7331 | overlap 545204 ATTTGGATCAAAAGA GATGCT AAAG AGCATC ACATAACATTCTCAA TERM 395 546116 - 546136 + G 100 -12.7 -4.23892 | opp_overlap 546112 546116 AAGAGTACCAAGCTA TTTTACCCC TAC GGGGTAAAA TTTTAAATACTTGGG TERM 396 546136 - 546116 - g 86 -12.7 -2.58539 | opp_overlap 546116, overlap 546112 AAGAGTACCAAGCTA TTTTACCCC TAC GGGGTAAAA TTTTAAATACTTGGG parE 544813 - 546693 + | DNA topoisomerase IV subunit B exsB 546686 - 547378 + | trans-regulatory protein ExsB TERM 397 547539 - 547563 + G 72 -4.9 -4.76123 | opp_overlap 547539, overlap 547541 AACAATTGGATGTAA GCGGTGATGTT GAT AACAACGCCTC TTTTGTTGATGATTT acpP 547487 - 547711 + | acyl carrier protein TERM 398 547766 - 547734 - f 100 -20.9 -4.26351 | opp_overlap 547734 547734 547737 TATCAACTTAACAAA TAAGGCGCTTATTTC TTT GAAATAAGCGCCTTA TTATATTTTCCAACA TERM 399 547734 - 547766 + F 100 -20.9 -3.95435 | opp_overlap 547734, overlap 547734 547737 TATCAACTTAACAAA TAAGGCGCTTATTTC TTT GAAATAAGCGCCTTA TTATATTTTCCAACA TERM 400 547737 - 547763 + F 100 -18.2 -4.09656 | opp_overlap 547734, overlap 547734 547734 CAACTTAACAAATAA GGCGCTTATTTC TTT GAAATAAGCGCC TTATTATATTTTCCA fabF 547790 - 549031 + | 3-oxoacyl-[acyl-carrier-protein] synthase I/II COSY_0522 549301 - 549089 - | hypothetical protein prlC 551228 - 549294 - | oligopeptidase A metG 553154 - 551517 - | methionyl-tRNA synthetase TERM 401 552216 - 552192 - G 73 -7.1 -3.9534 | opp_overlap 552197, overlap 552193 ATTTATAGTTAGAAA CCCATGTGCAA AGA TTGCACTTGGT GTACGATAATTCGAA TERM 402 552215 - 552193 - G 80 -10.6 -2.96722 | opp_overlap 552197, overlap 552192 TTTATAGTTAGAAAC CCATGTGCAA AGA TTGCACTTGG TGTACGATAATTCGA TERM 403 552197 - 552211 + g 73 -8.6 -3.272 | opp_overlap 552193 552192 TAGTTAGAAACCCAT GTGCAA AGA TTGCAC TTGGTGTACGATAAT mrp 553236 - 554309 + | Mrp-ATPase fdx 554898 - 554560 - | ferredoxin hscA 556765 - 554921 - | molecular chaperone HscA TERM 404 556320 - 556297 - G 77 -9.6 -2.98122 | overlap 556296 CATCATTGAAATAAG CTGGTGTAGT AATT ACTGCACCAG ATAACACGCCACCTA hscB 557296 - 556781 - | molecular chaperone HscB iscA 557632 - 557309 - | iron-sulfur cluster assembly protein iscU 558016 - 557639 - | scaffold protein TERM 405 557732 - 557747 + g 74 -3.3 -5.24003 | CGGTAGAGATAACTC TTCTG CAATGT CAGAA TTTTTAATTTTTGTT iscS 559298 - 558084 - | cysteine desulfurase iscR 559720 - 559301 - | Fe-S cluster-containing transcription factor cysE 560501 - 559803 - | serine O-acetyltransferase COSY_0535 561430 - 560570 - | lipid A biosynthesis lauroyl acyltransferase COSY_0536 562151 - 561411 - | hypothetical protein COSY_0537 564061 - 562691 - | hypothetical protein aroK 564582 - 564058 - | shikimate kinase I TERM 406 564159 - 564182 + g 76 -2.6 -5.43414 | overlap 564160 GATATAAAGGCCCCC GTTTTAATAA TAAA TTATTAAAAG TTTTTTCTCTGTCAT ilvE 565713 - 564784 - | branched-chain amino acid aminotransferase COSY_0540 566939 - 565716 - | aspartate kinase TERM 407 566851 - 566863 + g 74 -3.5 -5.252 | TGATGGCCTTTCTCT TTAAA TGC TTTAA TTTTTTGTGCAACTG TERM 408 566987 - 567019 + H 95 -10.9 -3.64755 | opp_overlap 566992, overlap 566992 CTAAAACAAGCTTTT TTAAACAGTATTTAA TAC TTAATTACTGTTTAA TTATTAAAGATATAT TERM 409 566992 - 567014 + H 71 -6.4 -4.07618 | opp_overlap 566992, overlap 566987 ACAAGCTTTTTTAAA CAGTATTTAA TAC TTAATTACTG TTTAATTATTAAAGA TERM 410 567758 - 567743 - g 74 -3.3 -5.2291 | ATATTAGAACAAAAA TTTGG GTTTAA CCAAA CAAATATAAAAACTT COSY_0541 567344 - 568591 + | peptidase M48, Ste24p COSY_0542 568654 - 568908 + | hypothetical protein COSY_0543 569023 - 569862 + | hypothetical protein TERM 411 570529 - 570519 - T 71 -5.4 -4.61873 | opp_overlap 570519 TTGGAGAAATTAAAA GCAA ATC TTGC TATACTTAACCAGCC COSY_0544 570871 - 570494 - | hypothetical protein TERM 412 571047 - 571091 + r 85 -8.4 -4.58773 | gap 1, opp_overlap 571047 571053 571061, overlap 571055 TTTGATAAAAATTGA TAATGATGCATATATTAAGAG TTAA CTTTTAATATATG-ATTATTA TTTTCCTTTAATACA TERM 413 571055 - 571084 + r 87 -10.3 -3.14308 | opp_overlap 571053 571047 571061, overlap 571047 AAATTGATAATGATG CATATATTAAGAG TTAA CTTTTAATATATG ATTATTATTTTCCTT COSY_0546 571632 - 571354 - | integration host factor, beta subunit rpsA 573344 - 571665 - | 30S ribosomal protein S1 TERM 414 573451 - 573430 - R 90 -11.7 -3.09933 | overlap 573432 GGTTAATTTATTTAA GAGGCTTAA CCGC TTAAGCCTC AACTAATGCTATCAC TERM 415 573449 - 573432 - R 71 -8.5 -3.1085 | overlap 573430 TTAATTTATTTAAGA GGCTTAA CCGC TTAAGCC TCAACTAATGCTATC cmk 574120 - 573443 - | cytidylate kinase lysS 575884 - 574394 - | lysyl-tRNA synthetase, class II TERM 416 574973 - 574956 - G 83 -4.9 -5.49729 | overlap 574943 AATGACTTAAAAAAA TCAAGAT TGTT ACCTTGA TAATAGACATTAGCG TERM 417 576488 - 576476 - R 70 -7.7 -3.33261 | opp_overlap 576477, overlap 576478 GTGTAACCTTGATAA CACCA CTT TGGTG GGTTAAATTAATAAT TERM 418 576504 - 576535 + r 91 -10.4 -3.53387 | opp_overlap 576503 576500 576504, overlap 576505 576511 GGTTAAATTAATAAT TGCTAAAGATTTAT TTTA ATAAATCTTTAGCC TTAGTTGTATCTATA TERM 419 576535 - 576504 - R 82 -10.4 -2.9313 | opp_overlap 576504 576505 576511, overlap 576503 576500 GGTTAAATTAATAAT TGCTAAAGATTTAT TTTA ATAAATCTTTAGCC TTAGTTGTATCTATA TERM 420 576505 - 576534 + r 100 -13.9 -2.71309 | opp_overlap 576504 576503 576500, overlap 576504 576511 GTTAAATTAATAATT GCTAAAGATTTAT TTTA ATAAATCTTTAGC CTTAGTTGTATCTAT ccmH 576948 - 576514 - | cytochrome c-type biogenesis protein CcmH TERM 421 577356 - 577345 - g 82 -3 -5.59534 | overlap 577354 AAGTACAAGAAAAAA TTGA TCAA TCAA ATAGTTGGCAATATT TERM 422 578023 - 578011 - g 71 -3.3 -5.12707 | overlap 578012 TGAAAGGTGAAAAAA TCGGT ATT ACCGG TAGTAATGGTACAGG uup 576987 - 578603 + | ABC transporter ATP-binding protein COSY_0552 578739 - 579359 + | hypothetical protein COSY_0553 580876 - 581526 + | hypothetical protein TERM 423 582030 - 582010 - g 81 -7.7 -4.44046 | opp_overlap 582009 TTCATTTTAAACAAA TTTCAGTAA CTG CTACTGAAA ATATAATTATGGCAG TERM 424 582382 - 582362 - g 70 -2 -5.28166 | gap 1, overlap 582370 TAAAACTAATAAAAA TTCA-ATCA TCCT TGATATGAA AGGAAAACGACCCAG murA 581526 - 582785 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase hisG 582792 - 583409 + | ATP phosphoribosyltransferase hisD 583406 - 584701 + | histidinol dehydrogenase ffh 586210 - 584810 - | signal recognition particle, subunit SRP54 TERM 425 585231 - 585243 + g 81 -7.7 -4.37092 | opp_overlap 585231 585230, overlap 585240 TCAGATAAATCAAAT TGACC TTT GGTCA TTTTCTGAAAAGACT TERM 426 586748 - 586733 - g 71 -3.4 -5.12068 | TACACGCAAGAAAAA TTAATA GTTT TATTAA TAAACTTCCAGCACT COSY_0558 586273 - 587052 + | cytochrome c assembly family protein lepA 589296 - 587509 - | GTP-binding protein LepA TERM 427 587668 - 587687 + g 74 -9.4 -3.08032 | overlap 587665 ATTCTTTCTGAGTGC TTTCACGT TTGA ACGTGAAA TAATTTTAGAACCAA COSY_0560 589337 - 589786 + | AhpC/TSA family peroxiredoxin TERM 428 590116 - 590104 - g 83 -6.3 -4.88067 | ATTTATGTAGAAAAA TTTGC TAG GCAAA ACACTAAAAAATTTG ubiG 589783 - 590481 + | 3-demethylubiquinone-9 3-methyltransferase COSY_0562 590517 - 590822 + | hypothetical protein acpS 591202 - 590819 - | holo-[acyl-carrier protein] synthase pdxJ 591924 - 591199 - | pyridoxal phosphate biosynthetic protein PdxJ era 593302 - 592352 - | GTP-binding protein Era rnc 593928 - 593263 - | ribonuclease III TERM 429 593768 - 593742 - GH 72 -7.5 -3.60971 | gap 1, opp_overlap 593737 ATCTTAATCGGGAAA GTTTTCCTTCGT CAAC AC-AAGGAAAAC GCTGATAAAGTTCTT COSY_0567 593960 - 594661 + | hypothetical protein thyA 595773 - 594979 - | thymidylate synthetase lgt 596555 - 595770 - | prolipoprotein diacylglyceryl transferase COSY_0571 596978 - 596667 - | ArsR family transcriptional regulator TERM 430 596889 - 596923 + g 72 -9.5 -2.73644 | opp_overlap 596896 596897, overlap 596878 596897 CAATGCACATAGAAT TTTTAAACGCAATGG ATGTG CCATTGCTTTTAAAG CTCTTGTTGCTTTTT TERM 431 596897 - 596915 + g 85 -8.9 -4.14874 | opp_overlap 596897 596896, overlap 596889 596878 ATAGAATTTTTAAAC GCAATGG ATGTG CCATTGC TTTTAAAGCTCTTGT COSY_0572 597569 - 596985 - | hypothetical protein TERM 432 597029 - 597040 + g 71 -3 -5.14965 | CATATCGCCTAACTT TGAT TAGT ATCA TTTTTTGATAAAAGT TERM 433 598840 - 598828 - g 80 -4.8 -5.35815 | opp_overlap 598828 GAGACTAAAGAAAAA GACC TTGAT GGTC ATTTAGAAGTTGAAA COSY_0573 597670 - 599001 + | carboxyl-terminal protease lepB 600336 - 599452 - | signal peptidase I yccK 600392 - 600733 + | sulfite reductase aroA 602743 - 601436 - | 3-phosphoshikimate 1-carboxyvinyltransferase COSY_0577 603602 - 602748 - | prephenate dehydrogenase COSY_0578 603889 - 603599 - | hypothetical protein pheA 605092 - 603992 - | bifunctional protein PheA TERM 434 604994 - 605034 + g 80 -2.8 -5.74122 | gap 1, overlap 604995 604999 605019 TTTCACTTGTGCAAC TTTAGCTACTAATTGTGCA CGAT TAC-CAATTAGTAGTTGGA TTTTTTTATCTAATA serA 606260 - 605103 - | D-3-phosphoglycerate dehydrogenase serC 607339 - 606260 - | phosphoserine aminotransferase TERM 435 606701 - 606679 - G 71 -3.4 -5.02357 | overlap 606681 TATAATCAAATAAAA TAGGCTGGTT AGC AACCACACTA CCCATTAAATCTTCT TERM 436 607615 - 607571 - H 93 -7.5 -5.11613 | opp_overlap 607572 ATATCATTCAAAAAA CCTTATTTATATTAATACTTA TCA CAAGTATTAATATAAATGCAG TTTTAGGACCTATTT TERM 437 607572 - 607615 + H 82 -8.7 -4.11773 | gap 1, opp_overlap 607571 TATCATTCAAAAAAC CT-TATTTATATTAATACTT ATCAC AAGTATTAATATAAATGCAG TTTTAGGACCTATTT TERM 438 608142 - 608124 - H 100 -7.6 -5.43866 | overlap 608141 TAATTGGCAAAAAAA TATATCTA ACA TAGATATA AATACAGGCATACGT TERM 439 608405 - 608389 - H 73 -5.3 -4.89393 | overlap 608379 TAAAGTTTATAAAAA TAAAATT AAA AATTTTA TAGACTATCACTATA TERM 440 609095 - 609081 - g 80 -7.2 -4.5538 | opp_overlap 609081 609080 ATAAAATCCACAAAA CAAAGA CTA TCTTTG CTATTTTTATTATGG COSY_0582 609059 - 609628 + | hypothetical protein cobO 609635 - 610228 + | cob(I)alamin adenosyltransferase glyA 611509 - 610250 - | serine hydroxymethyltransferase TERM 441 610884 - 610852 - G 100 -15.1 -3.24747 | TGGTTACATCAGCAA TTGCAACTGGTGA TGGATAT TCACCAGTTGCAA TCAAACCAGCAACAT TERM 442 611858 - 611876 + r 77 -9 -3.47462 | opp_overlap 611857 611858 611871, overlap 611865 AAATTATTAACGAAT CCATTATT ACC AATAATGG TATTATATTCTACTT TERM 443 611876 - 611858 - R 72 -9 -2.6581 | opp_overlap 611858 611865, overlap 611857 611871 AAATTATTAACGAAT CCATTATT ACC AATAATGG TATTATATTCTACTT moeB 612906 - 612160 - | molybdopterin biosynthesis protein MoeB msrA 613394 - 612903 - | peptide methionine sulfoxide reductase MsrA TERM 444 613516 - 613503 - H 78 -5.3 -5.14819 | opp_overlap 613503 AAAGCAAAAAATAAA GTCTA TTAT TAGAC ATTTTTAATACAAAT COSY_0588 613810 - 614277 + | hypothetical protein himA 614675 - 614346 - | integration host factor, alpha subunit pheT 617041 - 614675 - | phenylalanyl-tRNA synthetase beta subunit TERM 445 615588 - 615604 + g 70 -3.7 -4.84359 | opp_overlap 615588 GAAGTAGAATTAATA TTGGCTT CTA AAGACAA TTTTTGTACAGGTAA pheS 618063 - 617038 - | phenylalanyl-tRNA synthetase alpha subunit TERM 446 617604 - 617587 - G 70 -4.1 -4.70583 | TTTATCAATATAAAA CGTATCA TGCA TGGTACG AGCTGGATGATGTTT rplT 618782 - 618423 - | 50S ribosomal protein L20 rpmI 618992 - 618795 - | 50S ribosomal protein L35 TERM 447 618954 - 618967 + g 70 -8.1 -3.28785 | overlap 618953 GGCAGTTTTTTTGAA GCGCT TTGC AGCGC CTTTATTAGTTTTTA infC 619496 - 619047 - | translation initiation factor IF-3 thrS 621466 - 619556 - | threonyl-tRNA synthetase recJ 623239 - 621521 - | single-stranded-DNA-specific exonuclease RecJ COSY_0597 623780 - 623229 - | hypothetical protein TERM 448 623533 - 623550 + g 79 -9.9 -3.1505 | opp_overlap 623533 TTGCCCCAGTGACAA TGGTGAC TATA GTCACCA TTGCTAACCCCTGAT TERM 449 623550 - 623533 - G 81 -9.9 -3.35679 | opp_overlap 623533 TTGCCCCAGTGACAA TGGTGAC TATA GTCACCA TTGCTAACCCCTGAT COSY_0598 624768 - 623773 - | FAD dependent oxidoreductase lspA 625214 - 624756 - | lipoprotein signal peptidase TERM 450 625812 - 625795 - g 78 -2.1 -5.59357 | overlap 625786 625796 AGGACATTAAAAAAA CTTTTAA AGAA TTAAAAA ACTATTGGGATAATT fabI 625575 - 626357 + | enoyl-[acyl-carrier protein] reductase (NADH) COSY_0601 628589 - 626742 - | peptidyl-prolyl cis-trans isomerase D TERM 451 628554 - 628564 + g 79 -5.4 -5.04733 | opp_overlap 628545 AATTAAGTAGGATAT CCAA CCC TTGG TTTTGTTTCTAATTG TERM 452 628872 - 628888 + r 72 -8.7 -2.62616 | overlap 628865 628840 TTGAACTTGTGACCC TCGCCTT GTA AGGGCGA TGCTCTACCAACTGA hupB 629238 - 628963 - | DNA-binding protein HU-beta dsbE 629896 - 629366 - | thiol:disulfide interchange protein DsbE ccmE 630315 - 629893 - | cytochrome c-type biogenesis protein CcmE ccmC 631227 - 630487 - | heme exporter membrane protein CcmC TERM 453 630928 - 630916 - G 70 -4.1 -4.67234 | AGTTAAGGCTAAAAA GGTAA ATG CTACC CCAATAGGCGCTGAC COSY_0608 631925 - 631266 - | glycoprotease TERM 454 631323 - 631303 - G 95 -12.7 -3.6959 | opp_overlap 631294 631303 631306, overlap 631306 ACATTATTACGTAAA TAAGTTGGC AGT GCCAACTTA TTGCTAAATTTAATA TERM 455 631303 - 631323 + g 91 -12.7 -3.25802 | opp_overlap 631303 631306, overlap 631294 631306 ACATTATTACGTAAA TAAGTTGGC AGT GCCAACTTA TTGCTAAATTTAATA TERM 456 631320 - 631306 - G 87 -10 -3.97674 | opp_overlap 631306 631303 631294, overlap 631303 TTATTACGTAAATAA GTTGGC AGT GCCAAC TTATTGCTAAATTTA TERM 457 631306 - 631320 + g 83 -10 -3.76176 | opp_overlap 631303 631306, overlap 631303 631294 TTATTACGTAAATAA GTTGGC AGT GCCAAC TTATTGCTAAATTTA TERM 458 631405 - 631420 + g 78 -7.6 -4.20783 | opp_overlap 631405 TAAAAATTGGCAAAA CAGGTA TTAA TACCTG TTTGTTGAATGAGCT TERM 459 631420 - 631405 - G 78 -7.6 -4.20883 | opp_overlap 631405 TAAAAATTGGCAAAA CAGGTA TTAA TACCTG TTTGTTGAATGAGCT TERM 460 631661 - 631651 - G 71 -5.4 -4.59853 | TCAAGTGTTGAAAAA CCTA ATG TAGG GATATTATACGCTAA rpsF 632487 - 632828 + | 30S ribosomal protein S6 rpsR 632828 - 633082 + | 30S ribosomal protein S18 rplI 633092 - 633544 + | 50S ribosomal protein L9 TERM 461 633570 - 633597 + F 100 -10.1 -5.03145 | opp_overlap 633570 633577, overlap 633577 633591 CATTGTACGTTAAAA TTAAAAACCCT ATAATG AGGGTTTTTAA TTTTTTAAAAGGTTC TERM 462 633597 - 633570 - f 93 -10.1 -4.14243 | opp_overlap 633570 633577 633591, overlap 633577 CATTGTACGTTAAAA TTAAAAACCCT ATAATG AGGGTTTTTAA TTTTTTAAAAGGTTC TERM 463 633577 - 633590 + F 70 -3.8 -5.25735 | opp_overlap 633570 633577, overlap 633570 CGTTAAAATTAAAAA CCCT ATAATG AGGG TTTTTAATTTTTTAA dnaB 633630 - 635075 + | replicative DNA helicase alr 635084 - 636139 + | alanine racemase COSY_0614 636136 - 636837 + | metallophosphoesterase TERM 464 637608 - 637597 - g 83 -5.8 -5.06816 | opp_overlap 637597 ATTTTTCAAGAAAAA GGCT TGAA AGCC TTTATAGAAAACGAA COSY_0615 637054 - 637977 + | 5'-nucleotidase COSY_0616 638115 - 639053 + | hypothetical protein COSY_0617 639859 - 639500 - | hypothetical protein TERM 465 640447 - 640437 - H 72 -4 -5.3798 | TAACAATAACAAAAA TAGT AAT ACTA AAAGATAGATAACGA hisS 640605 - 641873 + | histidyl-tRNA synthetase TERM 466 642306 - 642296 - g 74 -3.2 -5.37345 | GGTAATTATAAAAAA GCAC TTG ATGC ATTAAATACTGTTCC TERM 467 642329 - 642313 - g 75 -8.1 -3.76402 | opp_overlap 642312 642315 ACTTGATGCATTAAA TACTGTT CCT AACAGTA CATTTAACGGGTTGT COSY_0619 641870 - 642487 + | hypothetical protein TERM 468 643663 - 643643 - g 79 -4.1 -5.27023 | AGGTTAAAAATAAAA TATGTCAAT CAA ACTAACATA TTTCCGCTAACTCTT COSY_0620 642494 - 643891 + | Era/TrmE family GTP-binding protein TERM 469 644052 - 644025 - T 75 -5.8 -5.08088 | opp_overlap 644030 AATCCTTAATAAAAA TACAACATTATT TACT AATAATGTTTTA TAGCTCTTATGTATC TERM 470 644058 - 644092 + T 81 -10.3 -2.67441 | overlap 644055 TAATGTTTTATAGCT CTTATGTATCTTATC GGCTA GATAAGATACATAAC TAACTTTACACTTTT TERM 471 644226 - 644251 + T 75 -6.4 -4.40311 | opp_overlap 644226 644225 ACAACCTACCAATAC TGAATAAATA ACTAAA TATTTATTCA TTTTCCCTTATTTAT pyrG 646250 - 644613 - | CTP synthetase TERM 472 646865 - 646835 - g 84 -11.3 -3.06315 | opp_overlap 646836 TTAACACTTTTAATA CTTTTACCGCTAG TATAT CTAGCGGTAAAAT TTTCCTCTAATCGTA TERM 473 646836 - 646864 + G 100 -14.8 -4.37502 | opp_overlap 646835 TAACACTTTTAATAC TTTTACCGCTAG TATAT CTAGCGGTAAAA TTTTCCTCTAATCGT msbA 646331 - 648052 + | lipid A export ATP-binding/permease protein MsbA COSY_0623 648803 - 648228 - | hypothetical protein COSY_0624 649683 - 648784 - | hypothetical protein TERM 474 648928 - 648915 - G 77 -3.1 -5.43866 | TAAGTTCTAAAAAAA TACAC ACTT GTGCA TTAAAGTCAATCTCA COSY_0625 650489 - 649680 - | hypothetical protein TERM 475 649799 - 649812 + g 93 -3.9 -6.09133 | ACATATTGTCTTTAA TAAAC TGAT GTTTA TTTTTTTTTGAAATA COSY_0626 650967 - 650479 - | hypothetical protein COSY_0627 652348 - 650960 - | hypothetical protein TERM 476 652243 - 652277 + g 75 -8.8 -3.52177 | overlap 652238 AATTTAAGGTTTTTT CCAACTTATTAATAGT TTG ATAATTAATGAGTTGG TTAGATTTTTTAAAA COSY_0628 652811 - 652350 - | hypothetical protein COSY_0629 653920 - 652856 - | glycosyltransferase COSY_0630 654213 - 653917 - | dioxygenase ferredoxin subunit COSY_0631 654827 - 654219 - | hypothetical protein TERM 477 654671 - 654681 + g 70 -4 -4.88067 | ATTGCACATGCATAG GTAT ACC ATAC TTTTTCTCACTAGCT csp 655138 - 654821 - | cold shock protein TERM 478 655027 - 655037 + g 76 -2.6 -5.52384 | CTTTCAAGCGAGATT TATT AAA AATA TTTTTTTGATGAACA TERM 479 656147 - 656175 + G 84 -6.1 -5.21709 | opp_overlap 656147 AGCTCTTTAGCAAAA CTACTTGGTGT TAAAGCC ACACCAACTAG TTTTTTCATCTCAAA COSY_0633 655781 - 656272 + | thioredoxin TERM 480 656293 - 656283 - g 74 -5.4 -4.6955 | TATGAACATACAAAA TTGG CAC CCAA GTATCAAAACATTAC ung 656254 - 656928 + | uracil-DNA glycosylase TERM 481 656990 - 657015 + G 90 -13.5 -3.06183 | opp_overlap 656992, overlap 656992 657006 TAGCCACTTTGGTAA TATCTCTACCA TCGC TGGTAGAGATA TTAACTCCACCTCAG TERM 482 657013 - 656992 - g 84 -11.7 -3.02511 | opp_overlap 656992 656990 657006 GCCACTTTGGTAATA TCTCTACCA TCGC TGGTAGAGA TATTAACTCCACCTC TERM 483 656992 - 657013 + G 84 -11.7 -3.08996 | opp_overlap 656992, overlap 656990 657006 GCCACTTTGGTAATA TCTCTACCA TCGC TGGTAGAGA TATTAACTCCACCTC pdxB 656928 - 657965 + | erythronate-4-phosphate dehyrogenase COSY_0636 660236 - 658536 - | bifunctional serine/threonine kinase and phosphatase TERM 484 658877 - 658850 - G 75 -10.1 -2.58663 | overlap 658849 ATTTATTCTGATAAG GTATATGAGAT GAAAAT ATCTCATATAC AATCACACCTAAACT COSY_0637 661705 - 660239 - | nitrate transporter TERM 485 661043 - 661024 - G 74 -9.4 -3.13636 | overlap 661023 AAGCAAGATACAAAG GTATGTTC ATTA GAACATAC AACCCCAAATCTGAA nirB 664077 - 661708 - | nitrite reductase (NAD(P)H) large subunit TERM 486 663422 - 663437 + g 72 -4.8 -4.73613 | TCCAAAGCTTTTACT TTATTG AATC CAATAA TTTTATTGATAATCA TERM 487 664175 - 664129 - H 100 -8.4 -5.30155 | gap 1 TTATGAAGCAAAAAA GCCAGTTACTACA-TTTATGT GCATAG ACATAAAATACAATAACTGGC TTCAATACCAAATTA TERM 488 664259 - 664222 - H 86 -4.3 -5.86965 | ACTGACGAAAAAAAA CGCTTACTTAATAATTT AATC AAAAAACTAAGTAAACG TCTATGTTCATTGTT moaE 664377 - 664826 + | molybdenum cofactor biosynthesis protein E mobA 665413 - 664829 - | molybdopterin-guanine dinucleotide biosynthesis protein A moeA 665492 - 666763 + | molybdopterin biosynthesis protein MoeA TERM 489 666938 - 666920 - g 71 -3.2 -5.03747 | AAACCTTGCAAAAAA TTAAAAAC AAT GATTTTAA AAAAGGTGATGTATT moaC 666760 - 667266 + | molybdenum cofactor biosynthesis protein C moaA 667259 - 668254 + | molybdenum cofactor biosynthesis protein A TERM 490 668516 - 668478 - g 83 -11.2 -2.67662 | opp_overlap 668477 668478 668481 668483, overlap 668477 668473 668480 AGAAAACAGATGAAG TAGCTTTTTATCCACCAG TTA CTGGTGGATAAAATAATA TCTTTAATTTCTTAC TERM 491 668478 - 668516 + G 77 -9 -3.69681 | opp_overlap 668478 668477 668473 668480, overlap 668477 668481 668483 AGAAAACAGATGAAG TAGCTTTTTATCCACCAG TTA CTGGTGGATAAAATAATA TCTTTAATTTCTTAC TERM 492 668514 - 668480 - g 73 -9.4 -2.86477 | opp_overlap 668478 668477 668481 668483, overlap 668478 668477 668473 AAAACAGATGAAGTA GCTTTTTATCCACCAG TTA CTGGTGGATAAAATAA TATCTTTAATTTCTT TERM 493 668481 - 668514 + G 79 -9.1 -3.41025 | gap 1, opp_overlap 668480 668478 668477 668473, overlap 668478 668477 668483 AAACAGATGAAGTAG CT-TTTTATCCACCAG TTA CTGGTGGATAAAATAA TATCTTTAATTTCTT TERM 494 668483 - 668511 + G 100 -17.7 -2.83953 | opp_overlap 668480 668478 668477 668473, overlap 668481 668478 668477 ACAGATGAAGTAGCT TTTTATCCACCAG TTA CTGGTGGATAAAA TAATATCTTTAATTT moaD 668273 - 668509 + | molybdenum cofactor biosynthesis protein D TERM 495 668845 - 668821 - T 83 -7.1 -5.07275 | overlap 668835 668838 TTACACAGATAAAAA GCTACAGCATG TAA CAAGCTACAGC ATGTAACAAGCTAAA COSY_0645 669758 - 669306 - | hypothetical protein TERM 496 669583 - 669594 + g 73 -4.4 -4.99643 | TGATTAATTTTCTCC TCCT CATT AGGA TTATTTTTTTTAATA narI 670445 - 669765 - | respiratory nitrate reductase gamma subunit TERM 497 670283 - 670265 - G 77 -9 -3.66055 | opp_overlap 670264 670268, overlap 670254 670260 670257 CAAAGAATAATAAGA TTATTCCA ATG TGGAATAA ATTACTACCCCATAA narJ 671117 - 670461 - | respiratory nitrate reductase delta subunit narH 672655 - 671114 - | respiratory nitrate reductase beta subunit narG 676386 - 672655 - | respiratory nitrate reductase alpha subunit TERM 498 674439 - 674452 + g 70 -3.9 -4.89729 | overlap 674438 TACGAACATTGCAAT CTATT ATAG AATAG TTTTTCCATTTTGTC TERM 499 675401 - 675413 + g 72 -4.9 -4.79174 | opp_overlap 675401 TGCTTGATATAATTA GTAAA ATA TTTAC TTTTATTGGTTAAAT TERM 500 677504 - 677484 - g 89 -9.1 -4.1552 | GATTTGCTCAACAAA TGCGTAATA TAT CATTACGCA CGGTTCCCACGGCGA moaB 677171 - 677701 + | molybdenum cofactor biosynthesis protein B TERM 501 677716 - 677736 + T 73 -9.1 -2.82834 | opp_overlap 677715 677713 677710 AAAATTTAACTAGAT TTCTTACCT AAT AGGTAAGAG TCTACTAGTGCGATA cbbO 680341 - 678095 - | Rubisco regulator CbbO cbbQ 681166 - 680357 - | Rubisco regulator CbbQ TERM 502 681208 - 681228 + r 100 -12.6 -3.9642 | opp_overlap 681208 AAATTTTATAAAAAA GCCTCTGC ATGTA GCAGAGGC TTTCATTAACTATTT TERM 503 681228 - 681208 - R 100 -12.6 -5.28826 | opp_overlap 681208 AAATTTTATAAAAAA GCCTCTGC ATGTA GCAGAGGC TTTCATTAACTATTT cbbM 682636 - 681254 - | ribulose bisphosphate carboxylase argJ 684841 - 683624 - | bifunctional arginine biosynthesis protein ArgJ TERM 504 684061 - 684096 + g 74 -6.4 -4.30576 | gap 1, opp_overlap 684060, overlap 684066 TCTTAGTTACAGTAT TTAGCGATTGT-TGGAA CTT TTCCATACAATCATTAA TTTTAATACTAGAAA COSY_0656 686545 - 684950 - | iron ABC transporter permease TERM 505 686494 - 686479 - G 73 -4 -5.20333 | overlap 686466 CAGCTACAACAAAAA TTGGCA TAGC TACCAA TAATGCTAAAACACT COSY_0657 687646 - 686627 - | iron ABC transporter substrate-binding protein COSY_0658 688352 - 687702 - | iron ABC transporter ATP-binding protein TERM 506 688131 - 688149 + g 75 -8.2 -3.71255 | TTCTCTTAATTCTGG TGGTACAT TAT GTGTACCA TTGTTAGATAATTGT COSY_0659 690113 - 688419 - | multicopper oxidase TERM 507 689664 - 689650 - G 79 -10 -3.31144 | opp_overlap 689643 TGTTCACCTGTATAA CCCTCA AGA TGAGGG TGATACCATTGAGTT COSY_0660 691082 - 690174 - | hypothetical protein TERM 508 690241 - 690223 - G 70 -4.6 -4.76802 | opp_overlap 690224, overlap 690210 690224 GGGAAAAATAACAAA TCTTTCAA ACT TTGAAAGT TTTTCATCTGCGTCT TERM 509 690240 - 690224 - G 72 -8.1 -3.44454 | opp_overlap 690224, overlap 690210 690223 GGAAAAATAACAAAT CTTTCAA ACT TTGAAAG TTTTTCATCTGCGTC TERM 510 690224 - 690240 + g 86 -8.1 -4.81551 | opp_overlap 690210 690224 690223 GGAAAAATAACAAAT CTTTCAA ACT TTGAAAG TTTTTCATCTGCGTC COSY_0661 692031 - 691066 - | hypothetical protein TERM 511 691150 - 691127 - G 82 -11.2 -2.57069 | opp_overlap 691127 691130, overlap 691125 691130 TCCATTAAAGAAATG TAATAGGCTT TCAT AAGCCTATTA GTTGATTGATATAAA TERM 512 691127 - 691150 + g 83 -11.2 -2.65521 | opp_overlap 691127 691125 691130, overlap 691130 TCCATTAAAGAAATG TAATAGGCTT TCAT AAGCCTATTA GTTGATTGATATAAA TERM 513 691130 - 691147 + g 75 -8.5 -3.47226 | opp_overlap 691130 691127 691125, overlap 691127 ATTAAAGAAATGTAA TAGGCTT TCAT AAGCCTA TTAGTTGATTGATAT TERM 514 691147 - 691130 - G 75 -8.5 -3.4241 | opp_overlap 691127 691130, overlap 691127 691125 ATTAAAGAAATGTAA TAGGCTT TCAT AAGCCTA TTAGTTGATTGATAT COSY_0662 693405 - 692038 - | hypothetical protein TERM 515 692333 - 692312 - G 74 -5.3 -4.68724 | opp_overlap 692312 692315 TCATGTAATAGAAAA TCACTATAT GGAT ATATAGTAA TATTAGGCAATGAAT COSY_0663 694693 - 693383 - | hypothetical protein TERM 516 695041 - 695020 - H 75 -8.1 -3.6217 | opp_overlap 695020 695037, overlap 695018 TGTTAATTAGAAATA TCTACAGAA CTAC TTCTGCAGA TTTGATACCTGCCTG TERM 517 695961 - 695949 - g 81 -7.7 -4.2828 | opp_overlap 695960 TCTGACTTATTAAAA GCCAA TGC TTGGC ATCATCGTTCAGATG COSY_0664 695502 - 696641 + | cation-efflux family protein COSY_0665 696989 - 697348 + | thioredoxin COSY_0666 697681 - 697355 - | arsenate reductase COSY_0667 698310 - 697678 - | hypothetical protein COSY_0668 698727 - 698314 - | hypothetical protein glyS 701181 - 699148 - | glycyl-tRNA synthetase beta subunit TERM 518 701767 - 701741 - R 73 -7.4 -4.04206 | overlap 701743 TCATTCGCAGATAAA TATTATTTCCCA ATT TGGGGAATAACA AGTACATATTATTCT TERM 519 701765 - 701743 - R 72 -7.8 -3.615 | overlap 701741 ATTCGCAGATAAATA TTATTTCCCA ATT TGGGGAATAA CAAGTACATATTATT COSY_0670 702288 - 701896 - | hypothetical protein COSY_0671 703127 - 702288 - | hypothetical protein TERM 520 702347 - 702327 - G 70 -6.9 -3.72893 | opp_overlap 702317, overlap 702331 GATTTGTGCATCAAA TACACTCCT ATC AGGAGCATA TGGTAACGGAGAAGC TERM 521 703098 - 703121 + g 79 -8.4 -4.08221 | opp_overlap 703098 703103 703113, overlap 703094 703109 AACAATCTTAGGTAA TTTAATTTCT TTAA AGAAATTAAA TTTCATTATCTTAAA tolR 703579 - 703127 - | biopolymer transport protein TolR tolQ 704264 - 703572 - | biopolymer transport protein TolQ TERM 522 704120 - 704140 + g 76 -2.5 -5.45813 | opp_overlap 704113 704120 AAAAAAACTTAATAC TCTTGTTAG TAT CAATCAAGA TTTTCTTTTTTGATA ruvB 705685 - 704657 - | Holliday junction DNA helicase B TERM 523 704789 - 704775 - G 73 -7.2 -3.90112 | opp_overlap 704775 704773 CCCTGTTGAATCAAA TATGGT TCT ACCATA TCTTCTAAAGTTCCA TERM 524 707120 - 707091 - g 76 -2.9 -5.40474 | opp_overlap 707092 707096, overlap 707092 707093 AGTGCCTTAAAAAAA CGCAAGCATAAAC CAAT ATTTATGCTTGAT ATTGCCATACCTCGT TERM 525 707118 - 707093 - g 76 -9.9 -2.89655 | opp_overlap 707092 707096, overlap 707092 707091 TGCCTTAAAAAAACG CAAGCATAAAC CAAT ATTTATGCTTG ATATTGCCATACCTC TERM 526 707253 - 707243 - g 100 -6.8 -6.23317 | AGAAAAAGAAAAAAA CCTG GCA CAGG AAATTATAATCAAAC TERM 527 707338 - 707316 - g 73 -7.8 -3.82604 | opp_overlap 707322 TTACCTAATGAACAA TTAGTACGAT CTT ATCGTTCTAA TGCTAACTTAATTAA hemA 706287 - 707537 + | glutamyl-tRNA reductase TERM 528 707827 - 707805 - g 86 -5 -5.63374 | TTAATACCAAAAAAA TTTTAAGTCA GCT TGATTTAAAA CTTAAGAAATCTATC prfA 707537 - 708622 + | peptide chain release factor RF-1 COSY_0677 709844 - 709041 - | zinc ABC transporter permease fur 710242 - 709835 - | negative regulator of ferric iron uptake TERM 529 710584 - 710566 - g 82 -5.3 -5.37043 | opp_overlap 710566 ACTTTATATAAAAAA GACGATA TTCAC TATCGCC TGATATTAAAGTTTA COSY_0679 710308 - 710805 + | hypothetical protein COSY_0680 711832 - 710873 - | peptidase S49 ccmA 711848 - 712444 + | heme exporter ATP-binding protein CcmA TERM 530 712703 - 712688 - g 81 -7.6 -4.30719 | opp_overlap 712688 GTGTTTTAGAACAAA TGGTGA TTTC TCACCA TTCACTACCTTTACT ccmB 712441 - 713106 + | heme exporter membrane protein CcmB metK 713260 - 714393 + | S-adenosylmethionine synthetase ahcY 714418 - 715788 + | S-adenosyl-L-homocysteine hydrolase TERM 531 715841 - 715853 + F 77 -3.5 -5.80727 | opp_overlap 715841 AGATTTTTATAATAA TTTTA CGG TAAAA TTTTTTGTTATTTTT glyQ 715880 - 716803 + | glycyl-tRNA synthetase subunit alpha TERM 532 717241 - 717261 + G 90 -11.3 -3.68351 | overlap 717244 CACTCATTGCACGTG CAACTAGAT ATT ATCTAGTTG TTTCACTAATCAAAG TERM 533 717244 - 717258 + G 73 -7.2 -3.97674 | overlap 717241 TCATTGCACGTGCAA CTAGAT ATT ATCTAG TTGTTTCACTAATCA COSY_0686 716805 - 717377 + | hypothetical protein COSY_0687 717358 - 717843 + | hypothetical protein TERM 534 719088 - 719074 - g 71 -3.5 -5.08169 | ATACAGGTTAAAAAA CAGCG TCTAG CACTG ATACAAAAAACAATA TERM 535 719213 - 719225 + G 78 -7.7 -4.12188 | opp_overlap 719213 719211 GACGTACAGAAAATA TGCGT AAC ACGCA TTTTAAAGGTGATAA TERM 536 719225 - 719213 - g 73 -7.7 -3.88698 | opp_overlap 719213, overlap 719211 GACGTACAGAAAATA TGCGT AAC ACGCA TTTTAAAGGTGATAA miaB 717997 - 719325 + | tRNA-thiotransferase COSY_0689 720406 - 719726 - | hypothetical protein TERM 537 720605 - 720568 - R 93 -8.7 -4.74215 | opp_overlap 720576, overlap 720569 ACACTATTAATAAAA TTAGCATATTCAAATAT AACT ATTTTTGAATATGCTAC AACTATACCATTATT TERM 538 720604 - 720569 - R 95 -12.2 -3.43445 | opp_overlap 720576, overlap 720568 CACTATTAATAAAAT TAGCATATTCAAATAT AACT ATTTTTGAATATGCTA CAACTATACCATTAT COSY_0690 721253 - 720750 - | hypothetical protein TERM 539 721730 - 721705 - H 79 -7.1 -4.58419 | ATAAAATATAATAAA TGTTAATTTCA TCTT TAAAATTAACA ATAAAAGACAATTAG trmU 722294 - 723382 + | tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase COSY_0692 723385 - 723996 + | hypothetical protein rpsT 724084 - 724344 + | 30S ribosomal protein S20 TERM 540 724613 - 724603 - g 77 -3.2 -5.5604 | TTAACTAATAAAAAA GCCT TTA AAGC CTATAACTATATTAC COSY_0694 724501 - 724983 + | hypothetical protein TERM 541 725398 - 725414 + G 89 -9.5 -4.24342 | opp_overlap 725401, overlap 725401 ATTACCTAATACTAT TAACACC ATT GGTGTTA TTTCTTCATCCACAG TERM 542 725401 - 725411 + G 71 -6.8 -4.24413 | opp_overlap 725401, overlap 725398 ACCTAATACTATTAA CACC ATT GGTG TTATTTCTTCATCCA TERM 543 725431 - 725472 + G 75 -9.7 -2.76093 | gap 1, overlap 725429 725428 TTCTTCATCCACAGG T-GCGGTTATTCAAGACATT ATT AAAGTATTGAATAACCGCTA TCCATTTGTTAAAAT xseA 724988 - 726388 + | exodeoxyribonuclease VII large subunit COSY_0696 727340 - 727579 + | hypothetical protein TERM 544 727658 - 727642 - f 76 -4.5 -5.27923 | opp_overlap 727642 CAAGGGTAGAAAAAA CCAAATA ATC TATTTAG ATTTTTTATAATTAT ispD 727955 - 728683 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 728680 - 729150 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase murC 729150 - 730559 + | UDP-N-acetylmuramate--alanine ligase murB 730571 - 731404 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 545 731484 - 731501 + G 78 -7.1 -4.36595 | opp_overlap 731484 731487 TTATCAGACACTCAA CAATCAA AATA TTGATTG TTTTACATTTGACTG ddlB 731401 - 732282 + | D-alanine-D-alanine ligase B TERM 546 732470 - 732452 - T 73 -7.6 -3.79906 | opp_overlap 732468, overlap 732464 732468 TTAGTTTCATAACAA GTATTAAT ACA ATTAATAC TAAAATAGTATTCAT bolA 733780 - 733472 - | cell division protein BolA TERM 547 734126 - 734108 - H 73 -7.4 -4.03141 | ACTATCACTAAATAA GGCTAAAC TCC GTTTCGCC AGCTACTAAAATAAC miaA 734693 - 735610 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 548 735651 - 735680 + T 73 -2.2 -5.69262 | opp_overlap 735656 TACACCTAGCAATAG TCAAAGAAATAG AACAGA CTATCTCTTAGA TTTTTATTTTTCTCA murD 737077 - 735779 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 549 736141 - 736157 + g 74 -2.3 -5.45813 | TAGTAGCTTTTGAAT CATTG TAATAAT CAATG TTTTGTTTTTTAATC TERM 550 736528 - 736512 - G 75 -8.1 -3.78235 | overlap 736503 736521 TTAGAATGAATATAA TACTCAA AAC TTGAGTA TCGATCAAGATGATC TERM 551 737270 - 737280 + G 71 -5.4 -4.48072 | ATGTCTCTAAACCTG CCAA ACT TTGG TTTTCTAATCACTCT TERM 552 737718 - 737728 + G 71 -5.4 -4.54343 | ATTACATTATGGCAA CAGT AAC ACTG TTTATTTCAATTTAT COSY_0705 737138 - 737797 + | carrier/transport protein TERM 553 737825 - 737813 - f 77 -3.5 -5.7946 | opp_overlap 737794 TTTTTAACAAAAAAA TTAAT TGA ATTAA TAGCCGAGGGGATAG TERM 554 738026 - 738016 - f 71 -5.4 -4.59591 | AATAAAATACTAAAA TAGC TAT GCTA CGATTTACTTGATTA TERM 555 739332 - 739310 - g 78 -7.8 -4.12941 | opp_overlap 739309 739310 739328 739329, overlap 739301 739311 AATAAATATTACAAA GTGCAATACT AAT AGTATTGCAA GTATTTTCTACTTGC TERM 556 739331 - 739311 - g 84 -11.3 -3.06138 | opp_overlap 739310 739309 739328 739329, overlap 739301 739310 ATAAATATTACAAAG TGCAATACT AAT AGTATTGCA AGTATTTTCTACTTG thrA 738300 - 739586 + | homoserine dehydrogenase TERM 557 739835 - 739813 - g 90 -10.7 -3.76402 | opp_overlap 739812 739811 739809, overlap 739834 ATGGCAGTTACTAAA GCTTTAGAG TCTGG CTCTAAAGC AATTATTTGCGCTTC thrC 739597 - 740661 + | threonine synthase TERM 558 740693 - 740677 - f 75 -3.7 -5.63103 | opp_overlap 740677, overlap 740686 CTCCAACTAAAAAAA GTTATGA TAT TCAAAAC TATTGAACAAACCAT cysM 740680 - 741567 + | cysteine synthase B TERM 559 741956 - 741971 + G 72 -2.6 -5.22943 | AGGACCTAGTATTCA TATTGG CGGT TCAATA TTTTTTGGATTTAAT TERM 560 742681 - 742713 + G 71 -7.9 -3.65261 | GGACCCCACTTACTT GTACATTTGTCATTT TAG AAATGACAAATACAC TTAATTTACTTATTC COSY_0709 741564 - 742847 + | chloride channel protein COSY_0710 743256 - 742834 - | hypothetical protein TERM 561 742985 - 742973 - G 93 -4.9 -5.96219 | TAGCCACAAAAAAAA TGATA TAC TATCA ACAACATTACTAATA TERM 562 743521 - 743484 - H 100 -10.9 -3.88175 | opp_overlap 743494, overlap 743489 743517 743519 GATATATTATAATAA TGACATTGAATAAACTA ATAT TAGTTTATTCAATAGCA ATAAAATTGCTACCA TERM 563 743516 - 743489 - H 90 -11.6 -3.04845 | opp_overlap 743494, overlap 743484 ATTATAATAATGACA TTGAATAAACTA ATAT TAGTTTATTCAA TAGCAATAAAATTGC TERM 564 743533 - 743517 - H 71 -8.1 -3.07113 | opp_overlap 743530, overlap 743484 743519 743530 TATTAGTTTATTCAA TAGCAAT AAA ATTGCTA CCATAGCTGTATAGT ftsY 743870 - 744829 + | cell division transporter substrate-binding protein FtsY TERM 565 745444 - 745467 + TF 72 -8.4 -3.14745 | opp_overlap 745435 745443 745441 745440, overlap 745441 ACTATAGATAATGAT TTATTATCAA GATC TTGATAATAA TCTGTGTTATAAGAG hemC 746486 - 745572 - | porphobilinogen deaminase COSY_0713 746485 - 746883 + | hypothetical protein argH 746962 - 748404 + | argininosuccinate lyase fmt 748404 - 749372 + | methionyl-tRNA formyltransferase clpB 749621 - 752179 + | ATP-dependent Clp protease ATP-binding subunit ClpB rnfE 752249 - 752890 + | electron transport complex protein RnfE TERM 566 753537 - 753527 - g 77 -5.4 -4.94222 | opp_overlap 753527 AATAAGTGATAAAAA TCCA AAC TGGA ATTTAACCGCAACTG TERM 567 753809 - 753795 - g 78 -7.2 -4.45723 | AATAACATACCAAAA TTTCTC AAT GAGAAA GGCTATCTATTATTA TERM 568 753935 - 753917 - g 84 -3.8 -5.68023 | overlap 753919 CTATAACCAAAAAAA TCGTGCAA TTT TAGCACAA ATTAAACATTAACAA hemK 753135 - 753947 + | protein methyltransferase HemK fumB 756078 - 754588 - | fumarate hydratase, class I mreB 756158 - 757237 + | rod shape-determining protein MreB TERM 569 757665 - 757653 - g 71 -3.5 -5.12785 | GAATTAAAAAACAAA TTATT ATT AATAA AGGTAGTAGTAGTGG mreC 757274 - 758068 + | rod shape-determining protein MreC mreD 758071 - 758541 + | rod shape-determining protein MreD mrdA 758499 - 760379 + | penicillin-binding protein 2 tgt 761798 - 760686 - | queuine tRNA-ribosyltransferase COSY_0725 763581 - 761788 - | ABC transporter ATP-binding protein ribD 764042 - 765091 + | bifunctional riboflavin biosynthesis protein RibD TERM 570 766229 - 766214 - g 95 -6.2 -5.96894 | ATTTAAACAAAAAAA TTGCTA AAAG TAGCAA AAAAAAAGTAGCAAA dfp 765088 - 766281 + | DNA/pantothenate metabolism flavoprotein TERM 571 766761 - 766743 - T 73 -9 -2.91976 | opp_overlap 766741, overlap 766740 TAATAAGTATAATTA TGGTTATT TTT AATAACCA GATATTTATAATCTA dnaE 770318 - 766893 - | DNA polymerase III alpha subunit TERM 572 769148 - 769126 - G 77 -5.6 -4.93296 | CGATCAGTACAAAAA TCAATGTCAA GAT CTGGCATTGA AACTCGCTCTGGATT TERM 573 770279 - 770260 - G 73 -9.4 -2.83701 | opp_overlap 770259 770258 770262, overlap 770262 GAAATACGTACTACA GAGTTTTC AACT GAAAACTC ACTTTGACAATGTAG COSY_0729 770777 - 770460 - | hypothetical protein soxA 771607 - 770792 - | sulfur oxidation protein SoxA soxZ 771937 - 771635 - | sulfur oxidation protein SoxZ soxY 772414 - 771971 - | sulfur oxidation protein SoxY soxX 772772 - 772425 - | sulfur oxidation protein SoxX COSY_0734 774450 - 772996 - | para-aminobenzoate synthetase component I TERM 574 773837 - 773847 + g 76 -4 -5.26875 | TCACTAAAGTGATGA GATT GAT AATC TTTTTTAATTAAAGG TERM 575 773929 - 773915 - G 85 -8.6 -4.11216 | opp_overlap 773915 TGCGCATCTTCAAAA TCCTGT TTA ACAGGA TTAATGTGTGTTATT TERM 576 773915 - 773929 + g 75 -8.6 -3.39569 | opp_overlap 773915 TGCGCATCTTCAAAA TCCTGT TTA ACAGGA TTAATGTGTGTTATT TERM 577 774500 - 774477 - R 88 -6.8 -5.46657 | opp_overlap 774477 774472 TATTGTAATAAAAAA CCACATCAAT TTTA ATTAATGCGG TTTTCCTTTTCTAAA rpoC 778719 - 774538 - | DNA-directed RNA polymerase beta' subunit rpoB 782815 - 778733 - | DNA-directed RNA polymerase beta subunit TERM 578 782930 - 782970 + r 83 -9.2 -3.51032 | opp_overlap 782930 782933 782943, overlap 782933 AATTTAGTCTATAAA TAAGACACTAAAATCCCC TTATC GAGGATTTTGGTATCTTA TTATGCTTAACCAAT TERM 579 782970 - 782930 - R 100 -11.4 -3.9009 | opp_overlap 782930 782933, overlap 782933 782943 AATTTAGTCTATAAA TAAGACACTAAAATCCCC TTATC GAGGATTTTGGTATCTTA TTATGCTTAACCAAT TERM 580 782967 - 782933 - R 82 -8.7 -4.07877 | opp_overlap 782930 782933, overlap 782930 782943 TTAGTCTATAAATAA GACACTAAAATCCCC TTATC GAGGATTTTGGTATC TTATTATGCTTAACC rplL 783359 - 782985 - | 50S ribosomal protein L7/L12 rplJ 783906 - 783382 - | 50S ribosomal protein L10 TERM 581 783960 - 783937 - R 100 -9 -5.2166 | GAACAATTTAAAAAA GAAAGTCATC TCTT GATAACTTTC GCCACAGAGTATTTA rplA 784802 - 784107 - | 50S ribosomal protein L1 rplK 785235 - 784807 - | 50S ribosomal protein L11 TERM 582 785200 - 785222 + g 82 -4.2 -5.4477 | TTCTTGTGCAGCTAC TTGAAGCTTA ATA TAGGATTCAA TTTTTTTGGCCATTT TERM 583 785317 - 785303 - R 71 -7.2 -4.00042 | opp_overlap 785303 CCCCTTATTAAATAA CAACTT TTA AAGTTG TTTGTCGTTTAAGTC TERM 584 785303 - 785317 + r 73 -7.2 -4.14725 | opp_overlap 785303 CCCCTTATTAAATAA CAACTT TTA AAGTTG TTTGTCGTTTAAGTC nusG 785859 - 785326 - | transcription antitermination protein NusG secE 786241 - 785870 - | preprotein translocase SecE subunit TERM 585 786190 - 786211 + g 74 -6 -4.5852 | opp_overlap 786190 786188 CGATCAAAATAGATA CAATCATT CCTAGT AATGATTG TTTTGCTTTAGGTTC tufB 787602 - 786412 - | elongation factor Tu maeB 789221 - 788001 - | malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) TERM 586 789594 - 789642 + r 71 -7.1 -3.88442 | gap 1, opp_overlap 789606, overlap 789590 789589 789595 789596 ATACAGTATTTTTAC CTGCTTAGGTAAGCTTATTTTT AACAAG AAAAATAAGATT-CCTAAGCAC TTTCATACTATTTTA TERM 587 789595 - 789641 + r 82 -10.6 -2.91981 | gap 1, opp_overlap 789606, overlap 789590 789589 789594 789596 TACAGTATTTTTACC TGCTTAGGTAAGCTTATTTTT AACAAG AAAAATAAGATT-CCTAAGCA CTTTCATACTATTTT COSY_0749 790059 - 789721 - | HIT family hydrolase COSY_0750 791690 - 790563 - | sulfide-quinone reductase TERM 588 791156 - 791140 - G 74 -2.3 -5.55664 | overlap 791142 791155 GTAGGAGTAAAAAAA GTTAAAT TAA ATTTATC ACGTCGACCTTCTCG COSY_0751 791950 - 792531 + | hypothetical protein TERM 589 792710 - 792676 - T 79 -4.7 -5.49234 | gap 2, opp_overlap 792676 792680 792692, overlap 792679 792681 AGACTCAACAAAAAA TAACA-T-AGTAAACTA ATT TAGTTTACTAAATGTTA TACATTTCTAAAATA TERM 590 792705 - 792679 - T 76 -6 -4.81306 | opp_overlap 792676 792680 792692, overlap 792676 792681 CTCAACAAAAAATAA CATAGTAAACTA ATT TAGTTTACTAAA TGTTATACATTTCTA TERM 591 792703 - 792681 - T 95 -10.8 -4.00001 | opp_overlap 792680 792676 792692, overlap 792679 792676 CAACAAAAAATAACA TAGTAAACTA ATT TAGTTTACTA AATGTTATACATTTC COSY_0752 792949 - 792701 - | hypothetical protein COSY_0753 793663 - 792965 - | glyoxalase II dapB 794687 - 793944 - | dihydrodipicolinate reductase TERM 592 794041 - 794027 - G 71 -8.6 -3.14211 | opp_overlap 794026 ACTCTGCTGCACGAA TTGCAC CAA GTGCAA ATGTCATTCTTGATG TERM 593 794673 - 794686 + g 71 -5.3 -4.54404 | GTTACTACCTGATAC TGCTA TTTT TAGCA TTTGTTATTCCTTTA kdsA 795670 - 794837 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 594 795971 - 795961 - g 74 -6.8 -4.42619 | opp_overlap 795960 TAATATTCCAGAAAA CCAG ATG CTGG ATGTTGCGTATAAAA TERM 595 796118 - 796102 - g 81 -8.1 -4.13767 | TGTGTTACGTGAAAA TTTCAAC CCT GTTGAAA TAGCCGAAAGCTACG COSY_0756 795875 - 796681 + | indole-3-glycerol-phosphate synthase COSY_0757 796678 - 797091 + | redox protein regulator TERM 596 797143 - 797167 + F 70 -4.3 -4.99645 | overlap 797145 TGATAGACTATCTAC TTTAGCCATTT AAA ATATGGCTATA TTTTCTTTATGGAGT TERM 597 797145 - 797165 + F 71 -6.9 -4.11748 | overlap 797143 ATAGACTATCTACTT TAGCCATTT AAA ATATGGCTA TATTTTCTTTATGGA TERM 598 797759 - 797749 - f 70 -4 -5.24449 | TACAAACGTAAAAAA TACT TAT AGTA CGATTTAAAAGTTTA TERM 599 797797 - 797770 - f 75 -7.3 -4.21908 | opp_overlap 797770, overlap 797784 TAGTACGATTTAAAA GTTTAAAAATT AAATAA AATTTTTAAAC TTTTTTTTCACAGTA TERM 600 797770 - 797797 + F 93 -7.3 -5.76949 | opp_overlap 797770 797784 TAGTACGATTTAAAA GTTTAAAAATT AAATAA AATTTTTAAAC TTTTTTTTCACAGTA thiG 797828 - 798607 + | thiazole synthase bioF 799156 - 800253 + | 8-amino-7-oxononanoate synthase bioH 800243 - 800980 + | biotin biosynthesis protein BioH TERM 601 801381 - 801363 - g 74 -6 -4.58663 | AGCAGGTGCTAAAAA TGCAGGTA TTT TAGCTGCA CAAATTATTGGCAAT purE 800995 - 801483 + | phosphoribosylaminoimidazole carboxylase catalytic subunit purK 801487 - 802566 + | phosphoribosylaminoimidazole carboxylase ATPase subunit COSY_0764 802948 - 802574 - | hypothetical protein folD 803778 - 802945 - | bifunctional protein FolD kdsB 804516 - 803782 - | 3-deoxy-manno-octulosonate cytidylyltransferase COSY_0767 804695 - 804516 - | hypothetical protein lpxK 805639 - 804692 - | tetraacyldisaccharide 4'-kinase TERM 602 804963 - 804982 + g 72 -5 -4.74132 | opp_overlap 804959 CCATGACAATATTCA CCATTGAA ATAA TCCAATGG TTTTTCCTCGCCTGT TERM 603 806897 - 806907 + G 76 -6.8 -4.52347 | ATGTCGCTCATTATT GCAG TTG CTGC TTTTAATATTGTTTC TERM 604 807195 - 807216 + G 73 -3.7 -5.13722 | overlap 807196 TACATATAATAGATA TCGTTAAAG TTAT CTTTGGCGG TTTTATTTTAATAAC lolE 806066 - 807301 + | lipoprotein ABC transporter permease LolE lolD 807294 - 807968 + | lipoprotein ABC transporter ATP-binding protein LolD TERM 605 808223 - 808196 - T 95 -8.6 -5.16681 | opp_overlap 808222 CCAAAAAGAACAAAA TCTATAAGTAAG TAAA CATACTTATAGA TAATAAAAACATGGC TERM 606 808353 - 808339 - T 76 -4.4 -5.44119 | opp_overlap 808342, overlap 808342 TTCATTGTAAAAAAA TATTTT TAT AAAATA TAAAATGTCTAAATA panD 808773 - 808390 - | aspartate 1-decarboxylase TERM 607 808423 - 808438 + g 72 -2.6 -5.29445 | TTTACTCCCTGTACT TATCTT AGTT AGGATA TTTTTATTATTAACA oadB 809913 - 808783 - | oxaloacetate decarboxylase, beta subunit oadA 811700 - 809928 - | pyruvate carboxylase subunit B TERM 608 811999 - 812009 + r 75 -4 -5.59655 | TAAAATCTATTTGTT TCAT ATT ATGA TTTTTTATTAATTTG TERM 609 812080 - 812064 - R 82 -9.5 -3.34344 | TCACCCCCGAAGGAA CTGGATT TTG AATCCAG CGCGTCTACCAATTC infA 812334 - 812116 - | translation initiation factor IF-1 TERM 610 812408 - 812421 + H 75 -6.7 -4.4017 | opp_overlap 812408 GTTAAAAAATCATAA GCTAG ATAT CTAGC TTTTATAGAAATTGA TERM 611 812745 - 812723 - g 74 -2.1 -5.40474 | ATTGGTTTAAAAAAA TCTAATATT ATTGA ATTATTAGA CAAATACAAAGCTAT metF 812501 - 813322 + | 5,10-methylenetetrahydrofolate reductase COSY_0777 813798 - 813334 - | hypothetical protein TERM 612 813574 - 813596 + g 83 -4.8 -5.46276 | opp_overlap 813573 813575, overlap 813575 ACCAGCTTTAAACAT AGCATCAGAT TTT ATCTGTTGCA TTTTTTGTATGTATT TERM 613 813575 - 813595 + g 75 -8.3 -3.85325 | opp_overlap 813575 813573, overlap 813574 CCAGCTTTAAACATA GCATCAGAT TTT ATCTGTTGC ATTTTTTGTATGTAT TERM 614 813595 - 813575 - G 70 -8.3 -3.25204 | opp_overlap 813574 813575, overlap 813573 CCAGCTTTAAACATA GCATCAGAT TTT ATCTGTTGC ATTTTTTGTATGTAT hemD 814562 - 813816 - | uroporphyrinogen-III synthetase TERM 615 814258 - 814271 + g 83 -6.7 -4.85782 | TCAAGTTCTAACAGT GCTTC GCTA GAAGC TTTATTTTTAGGAAA COSY_0779 815159 - 814566 - | hypothetical protein COSY_0780 815220 - 816173 + | Ca2+:Na+ antiporter COSY_0781 816158 - 816625 + | hypothetical protein dsrR 817537 - 817196 - | intracellular sulfur oxidation protein DsrR dsrN 818910 - 817534 - | intracellular sulfur oxidation protein DsrN TERM 616 818795 - 818820 + g 72 -2.7 -5.30616 | opp_overlap 818786, overlap 818797 ATATAATCAGGACCT TTTTTAAAAGT CTGA ACATTTAAAGA TTTTTGTTTAAATGC dsrP 820140 - 818938 - | intracellular sulfur oxidation protein DsrP dsrO 820897 - 820166 - | intracellular sulfur oxidation protein DsrO dsrJ 821277 - 820894 - | intracellular sulfur oxidation protein DsrJ dsrL 823271 - 821307 - | putative glutamate synthase (NADPH) small subunit dsrK 824892 - 823327 - | intracellular sulfur oxidation protein DsrK TERM 617 824027 - 823998 - G 80 -9.3 -3.52472 | opp_overlap 824000, overlap 823994 823999 824013 824015 ACACTTCTAAATCAA GTGCTGCTTTACG AATA CGTAAAGCAGCTT TACGCATGACATCAT TERM 618 824026 - 823999 - G 86 -12.8 -2.71001 | opp_overlap 824000, overlap 823998 823994 824013 824015 CACTTCTAAATCAAG TGCTGCTTTACG AATA CGTAAAGCAGCT TTACGCATGACATCA TERM 619 824000 - 824025 + g 100 -16.3 -3.57462 | opp_overlap 823999 823998 823994 824013 824015 ACTTCTAAATCAAGT GCTGCTTTACG AATA CGTAAAGCAGC TTTACGCATGACATC TERM 620 824033 - 824013 - G 74 -9.1 -3.14132 | opp_overlap 824000, overlap 823999 823998 823994 824015 GTGCTGCTTTACGAA TACGTAAAG CAG CTTTACGCA TGACATCATAAGAAC TERM 621 824031 - 824015 - G 74 -9.5 -3.13403 | opp_overlap 824000, overlap 823999 823998 823994 824013 GCTGCTTTACGAATA CGTAAAG CAG CTTTACG CATGACATCATAAGA dsrM 825667 - 824894 - | intracellular sulfur oxidation protein DsrM TERM 622 825572 - 825588 + g 74 -2.3 -5.42259 | GAGAGGAGCTGGAGT TATACCA AAT TGATATA TTTTTTTCACCATCC dsrC 826067 - 825744 - | intracellular sulfur oxidation protein DsrC dsrH 826390 - 826094 - | intracellular sulfur oxidation protein DsrH dsrF 826806 - 826402 - | intracellular sulfur oxidation protein DsrF dsrE 827211 - 826810 - | intracellular sulfur oxidation protein DsrE dsrB 828297 - 827224 - | intracellular sulfur oxidation protein DsrB TERM 623 828348 - 828324 - R 77 -7.3 -4.5477 | CAATATATTATAAAA TTAGGTGAA ATCTACA TTCACCTAA AAGGTTGTTATTTAA dsrA 829674 - 828373 - | intracellular sulfur oxidation protein DsrA TERM 624 829859 - 829847 - R 74 -4.9 -5.24416 | opp_overlap 829847 CAACTATAATAAAAA CTAAT AGA ATTAG TTAATACCATTGAAA gltD 831340 - 829907 - | glutamate synthase (NADPH) small chain rplS 831491 - 831844 + | 50S ribosomal protein L19 greA 832411 - 831932 - | transcription elongation factor GreA carB 835620 - 832414 - | carbamoyl-phosphate synthase large subunit TERM 625 833510 - 833498 - G 74 -6.3 -4.30416 | overlap 833502 ACTACTAATGGAAAA CCAAT CGC ATTGG CAATATCTTGTGCCT TERM 626 833630 - 833654 + g 71 -5.7 -4.53705 | TCAATAGCATCTGGA GTTGTGCCAAT AAT ATTTGCACCAC TTTTCTCTAAAGCTT TERM 627 834662 - 834681 + g 85 -8.6 -4.26076 | opp_overlap 834635 TTTGCAGCTACTTTA GCAATAGG AAAA CCTGTTGC TTTTGATGCCAATGC vacJ 836329 - 835643 - | surface lipoprotein VacJ carA 837447 - 836326 - | carbamoyl-phosphate synthase small subunit COSY_0802 837558 - 837827 + | hypothetical protein thiS 837824 - 838024 + | thiamine biosynthesis protein ThiS COSY_0804 839588 - 838542 - | hypothetical protein COSY_0805 839956 - 840246 + | intracellular sulfur oxidation protein DsrC TERM 628 840224 - 840241 + T 89 -9.9 -3.53012 | opp_overlap 840214 840235 AATACGGTGGTATGC CACAACC AACA GGTTGTG TTTAACCCAAAAAAA alaS 842872 - 840275 - | alanyl-tRNA synthetase COSY_0807 843535 - 842921 - | Sua5 family translation factor TERM 629 843156 - 843144 - G 78 -7.7 -4.24887 | opp_overlap 843135 AACACATCTAATAAA GCTTG AAC CAAGC CATGATTAGATACTC COSY_0808 844359 - 843529 - | hypothetical protein TERM 630 844798 - 844785 - g 74 -3.1 -5.3321 | AAGCAAGAACAAAAA GCACA AGGC TATGC TTTCACTTCAGATAC TERM 631 845048 - 845058 + G 76 -2.6 -5.40072 | TTTATTAGGTATTAC TAAA AAA TTTA TTTTTTTAGAAGAGG glmS 844437 - 846284 + | glucosamine--fructose-6-phosphate aminotransferase (isomerizing) pgi 846290 - 847528 + | glucose-6-phosphate isomerase TERM 632 848033 - 848009 - g 73 -9.5 -2.8082 | opp_overlap 848009 848011, overlap 848008 848011 TAGCTATCGAAGAAG TACCTATGAAT CAA ATTCATAAGTA TGGTGTGATTGTTGG galU 847525 - 848358 + | UTP--glucose-1-phosphate uridylyltransferase TERM 633 849566 - 849523 - g 70 -4.1 -4.7497 | gap 2 TCGAGCTAGTAAAAA GTGAAGTTCGCCATGAACAAG CATA CTTAT-CACGA-GAACTCCAC AAACAAGATAAATTA COSY_0812 849069 - 849797 + | glycosyltransferase COSY_0813 850417 - 851157 + | hypothetical protein TERM 634 851588 - 851578 - g 71 -6.8 -4.2586 | TTATATCAAGATAAA GCAG GAG CTGC AGCGTATGTATTATA COSY_0814 851158 - 851934 + | glycosyl transferase family protein COSY_0815 851947 - 852984 + | glycosyl transferase family protein TERM 635 853313 - 853303 - f 78 -5.4 -5.24129 | TTTTTGTATAAAAAA GTAG CTT CTAC TGGAATAGTAACCCT TERM 636 854694 - 854706 + G 73 -7.7 -3.89614 | opp_overlap 854693 GTGATGCAATTGAAG GAGTG ACT CACTC TTTATGCACATTAGA glnS 854027 - 855688 + | glutaminyl-tRNA synthetase surE 856884 - 856135 - | acid phosphatase clpA 859129 - 856907 - | ATP-dependent Clp protease ATP-binding subunit ClpA TERM 637 858810 - 858799 - G 74 -3 -5.24129 | opp_overlap 858799 858808, overlap 858777 858808 CCTTTTCAGAAAAAA TACT CACA AGTA TATTCATTGCATATA COSY_0819 860428 - 859346 - | permease guaA 860473 - 862038 + | bifunctional GMP synthase/glutamine amidotransferase protein COSY_0821 862029 - 862490 + | hypothetical protein fabG 863254 - 862508 - | 3-oxoacyl-[acyl-carrier protein] reductase fabD 864183 - 863251 - | [acyl-carrier-protein] S-malonyltransferase TERM 638 864229 - 864243 + r 93 -10 -4.12456 | opp_overlap 864229 TTAATTAATAAAAAA GCGCTT GAA AAGCGC TTTTCAAAATAATCT TERM 639 864243 - 864229 - R 100 -10 -5.5604 | opp_overlap 864229 TTAATTAATAAAAAA GCGCTT GAA AAGCGC TTTTCAAAATAATCT rpmA 864528 - 864271 - | 50S ribosomal protein L27 TERM 640 864421 - 864397 - G 79 -8.7 -3.72695 | opp_overlap 864396 AGTGCCTGGATGAAA TTTAGTACCTC TTT GACGTACTAAA ATATTACCAGCTAGC rplU 864851 - 864540 - | 50S ribosomal protein L21 TERM 641 864708 - 864697 - G 74 -5.8 -4.61199 | ACTTTAGACACAAAA GGTG TTCC CACC TGAATATCATCTCCA ppiB 864977 - 865462 + | peptidyl-prolyl cis-trans isomerase B lpxH 865465 - 866187 + | UDP-2,3-diacylglucosamine hydrolase COSY_0828 867957 - 866152 - | ribonuclease II family protein gcvH 868340 - 867966 - | glycine cleavage system H protein gcvT 869460 - 868384 - | glycine cleavage system aminomethyltransferase T ispZ 870113 - 869460 - | intracellular septation protein TERM 642 869802 - 869815 + g 74 -2.4 -5.42259 | TTCTTTTCCTAACAT CCTT TGTAAT AAGG TTTTTTTACCAATCC TERM 643 870121 - 870075 - G 82 -3.4 -5.74288 | gap 1, opp_overlap 870086 870110 870111 870113 ATAAACAACAAAAAA TAGAATAATAGGAAAAAATTC AAGTAA GAATTTATTCAT-TTATTCTA AATGCTCTTTAGAGC TERM 644 870131 - 870147 + r 70 -5.9 -4.22883 | opp_overlap 870124, overlap 870123 870136 ATTCTAAATGCTCTT TAGAGCA ATA TGCTTTA TTGTTTTGAATAATC COSY_0832 870323 - 870114 - | hypothetical protein TERM 645 870248 - 870258 + g 73 -4 -5.14563 | TAATACGATCAATTG GTTT CCT AAAC TTTTTTAATAACCAA TERM 646 871062 - 871052 - g 73 -4 -5.12617 | overlap 871040 GAACTACCTAAAAAA TCTA TGG TAGA AATAGATGGGGTTAT COSY_0834 870701 - 871108 + | endoribonuclease L-PSP family protein TERM 647 871262 - 871242 - g 72 -2.5 -5.35365 | opp_overlap 871247, overlap 871247 AAAACACAACAAAAA CTAAATGCC ATT GGCATTTTT AATTTGGAGCATTTA TERM 648 871247 - 871257 + G 83 -6.8 -4.98531 | opp_overlap 871242 871247 ACAACAAAAACTAAA TGCC ATT GGCA TTTTTAATTTGGAGC TERM 649 871257 - 871247 - g 74 -6.8 -4.44392 | opp_overlap 871247, overlap 871242 ACAACAAAAACTAAA TGCC ATT GGCA TTTTTAATTTGGAGC TERM 650 873205 - 873182 - g 71 -3.2 -5.07941 | overlap 873186 AAAATTAGACAAAAA CAAGCAACAA ATAC TTATTACTCG TTGGATTACTAATGA recG 871179 - 873245 + | ATP-dependent DNA helicase RecG TERM 651 873458 - 873433 - g 93 -4.9 -5.9873 | gap 1, opp_overlap 873433 TTATCACAAAAAAAA TCTATTCCA-CA TGC TGATGAAATAGA ATTGCTTGATTGGCA TERM 652 873468 - 873480 + G 81 -7.7 -4.30719 | AATAGAATTGCTTGA TTGGC ACA GCCAA TTTGTTGTACGCGAA ubiC 873277 - 873741 + | chorismate--pyruvate lyase TERM 653 874068 - 874057 - f 76 -3 -5.9667 | AAAAATACAAAAAAA TCAA TCGA TTGA AAACATACAAATAAC COSY_0837 874189 - 874776 + | para-aminobenzoate synthetase component II TERM 654 874799 - 874818 + G 73 -8 -3.6106 | AAATATTTGAATTCT TATTTGCT AATG AGCAAATA TTTACAACTATTACG COSY_0838 874780 - 875199 + | rhodanese family protein TERM 655 875364 - 875349 - g 76 -4 -5.26158 | overlap 875351 GAAAGAAAAAACAAA TAGAAC AACC GTTCCA CAAATATTTATTAAT grxC 875206 - 875460 + | glutaredoxin 3 gpsA 875457 - 876440 + | glycerol-3-phosphate dehydrogenase (NAD(P)+) cobC 876437 - 876964 + | alpha-ribazole phosphatase rpsI 877758 - 877363 - | 30S ribosomal protein S9 rplM 878199 - 877771 - | 50S ribosomal protein L13 TERM 656 877948 - 877982 + g 70 -4.4 -4.6821 | opp_overlap 877955, overlap 877952 877974 AAATGCTATTGATTT TAAGTTACCAACATAT CCT GTATGGTGGTAATATA TTTTGTCTTCAAATT TERM 657 877952 - 877978 + g 71 -7.4 -3.55442 | opp_overlap 877955, overlap 877948 877974 GCTATTGATTTTAAG TTACCAACATAT CCT GTATGGTGGTAA TATATTTTGTCTTCA TERM 658 878384 - 878404 + H 89 -9.9 -3.55205 | opp_overlap 878384, overlap 878377 TTAAATTTGTTAAAA TTATACCTA AAT TAGGTATAA TTCTGATCTTCATTT TERM 659 878404 - 878384 - H 93 -9.9 -4.12942 | opp_overlap 878384 878377 TTAAATTTGTTAAAA TTATACCTA AAT TAGGTATAA TTCTGATCTTCATTT TERM 660 879865 - 879850 - g 72 -6.2 -4.39386 | GCTAAACCACTAAAA GGATTT CCGA AAATCC CAATGTGTCGCTATA deaD 878434 - 880260 + | ATP-dependent RNA helicase DeaD TERM 661 880341 - 880331 - f 72 -4 -5.4505 | TTTTTTAATAAAAAA CTTT CTT AAAG CGTATCTAATTGGCA TERM 662 880986 - 880972 - g 80 -7.2 -4.46656 | TCTACAACAGGAAAA GTCAAA TGG TTTGAC GCAAAGAAAGGGTTT cspC 880954 - 881157 + | cold shock protein TERM 663 881175 - 881206 + F 74 -8.9 -3.02568 | opp_overlap 881175 881178 881181, overlap 881178 881181 TATTGCTTATCTAAA TAATAAGCCCAAT TTAATC ACTGGGCTTATTA TCATTTCCTATTACA TERM 664 881206 - 881175 - f 95 -11.1 -3.6502 | opp_overlap 881175 881178 881181, overlap 881178 881181 TATTGCTTATCTAAA TAATAAGCCCAAT TTAATC ACTGGGCTTATTA TCATTTCCTATTACA TERM 665 881203 - 881178 - f 78 -8.4 -3.96216 | opp_overlap 881178 881175 881181, overlap 881175 881181 TGCTTATCTAAATAA TAAGCCCAAT TTAATC ACTGGGCTTA TTATCATTTCCTATT TERM 666 881335 - 881363 + F 79 -4.8 -5.45726 | overlap 881333 TAATTTATCCCTGTT TTAGATATAAAA GTATA TTTTTTATCTAA TTTTTTTAGAATATG TERM 667 881751 - 881784 + F 70 -2.7 -5.52909 | AGGTGTTACATCTAG TTGTTAGTAATAT TCCTGTAT ATATTGTTAACAA TTTTTTTAAATATTA TERM 668 881944 - 881928 - f 75 -8.1 -3.61652 | opp_overlap 881927 881928 881930, overlap 881909 881924 TTCGTAAACAACCAA TACACTA AAC TAGTGTA CTTATGAAAACATTT TERM 669 882196 - 882162 - g 71 -8.8 -2.98982 | opp_overlap 882162, overlap 882156 882155 AGCAAAAAGGAATGA TTGAGCATAAATTTAT TAA AAAAATTCACGCTCAA CTTTCAACTCCAGAT sbcB 881948 - 883369 + | exodeoxyribonuclease I nth 883439 - 884071 + | endonuclease III TERM 670 884534 - 884511 - T 72 -7.6 -3.48861 | opp_overlap 884514, overlap 884510 884514 884532 TTACAGAAAATAAAC TAATTTTGCC AATT GACAAAATTA CTAAGTAACTGCAAC hisH 885127 - 884510 - | amidotransferase HisH COSY_0849 885712 - 885134 - | imidazoleglycerol-phosphate dehydratase COSY_0850 885867 - 885727 - | hypothetical protein asd 886964 - 885942 - | aspartate-semialdehyde dehydrogenase TERM 671 887023 - 886968 - R 100 -11.3 -3.91897 | opp_overlap 886969 886970 886972 886975, overlap 886969 886972 886992 CTTTTTATTCATAAA GTTATAATTTATAAGTTATATAA-ATA ATAT TATATTATATAACTTATAAATTATA-C TTGAGTTTTAATCAA TERM 672 887023 - 886969 - R 90 -11.5 -2.94924 | gap 1, opp_overlap 886969 886970 886972 886975, overlap 886968 886972 886992 TTTTTATTCATAAAG TTATAATTTATAAGTTATATAA-ATA ATAT TATATTATATAACTTATAAATTATAC TTGAGTTTTAATCAA TERM 673 886969 - 887023 + r 95 -11.5 -3.39521 | gap 1, opp_overlap 886968 886969 886972 886992, overlap 886970 886972 886975 TTTTTATTCATAAAG TTATAATTTATAAGTTATATAA-ATA ATAT TATATTATATAACTTATAAATTATAC TTGAGTTTTAATCAA TERM 674 886972 - 887020 + r 93 -13.2 -2.84988 | gap 1, opp_overlap 886968 886969 886972 886992, overlap 886970 886969 886975 TTATTCATAAAGTTA TAATTTATAAGTTATATAA-ATA ATAT TATATTATATAACTTATAAATTA TACTTGAGTTTTAAT TERM 675 887020 - 886972 - R 91 -13.2 -2.71325 | gap 1, opp_overlap 886970 886972 886969 886975, overlap 886968 886969 886992 TTATTCATAAAGTTA TAATTTATAAGTTATATAA-ATA ATAT TATATTATATAACTTATAAATTA TACTTGAGTTTTAAT TERM 676 886975 - 887017 + r 91 -10.5 -3.55783 | gap 1, opp_overlap 886972 886968 886969 886992, overlap 886970 886972 886969 TTCATAAAGTTATAA TTTATAAGTTATATAA-ATA ATAT TATATTATATAACTTATAAA TTATACTTGAGTTTT TERM 677 887070 - 887094 + r 73 -4.4 -5.10765 | AGCAGGTTATTTTTA TCCTATCT CACTGTCCA AGATAGGA TTTTATTATTTATTT COSY_0852 888310 - 887570 - | hypothetical protein hisC 889384 - 888320 - | histidinol-phosphate aminotransferase TERM 678 889290 - 889280 - G 79 -5.4 -5.05113 | GTCAGATAAAGAAAA TGGA GAT TCCA TAGCATCCATTTTTA thiD 890133 - 889381 - | bifunctional thiamine biosynthesis ThiD dsbA 890743 - 890126 - | DsbA family thiol:disulfide interchange protein COSY_0856 891228 - 890746 - | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase folB 891574 - 891221 - | dihydroneopterin aldolase COSY_0858 891630 - 892220 + | hypothetical protein ppk 892320 - 893231 + | polyphosphate kinase COSY_0860 893228 - 893482 + | hypothetical protein COSY_0861 894340 - 893582 - | ABC transporter permease COSY_0862 895257 - 894340 - | ABC transporter ATP-binding protein TERM 679 894728 - 894744 + g 73 -8 -3.6692 | opp_overlap 894728, overlap 894726 AGTTTACTCAAAAAA CGCCAT ATTGA ATGGCG TATTTTAACATCAAC TERM 680 894744 - 894728 - G 90 -8 -5.09225 | opp_overlap 894728 894726 AGTTTACTCAAAAAA CGCCAT ATTGA ATGGCG TATTTTAACATCAAC TERM 681 895011 - 895023 + g 71 -3.5 -5.07053 | TAAATTCTTGCGGCA TTAAT CCA ATTAA TTTTTTCACCTGATT TERM 682 896575 - 896553 - g 80 -2.8 -5.76949 | overlap 896574 GATGTTGAAAAAAAA TCTTTAAC TGATTTG GCTAAAGA ACTTTTTGAAACTTC aceF 895365 - 896888 + | pyruvate dehydrogenase complex E2 component TERM 683 897125 - 897106 - g 72 -8 -3.34895 | opp_overlap 897109 GTTACCTTTAATGAA CCATTAAT TAGC ATTAATGG TATACGTACAAATAA lpdA 896881 - 898287 + | pyruvate dehydrogenase complex E3 component TERM 684 898356 - 898344 - g 87 -10.5 -3.83566 | opp_overlap 898342, overlap 898342 ATTGAACAACAAATA CGCCC TTG GGGCG GCTTGAATTATATTG pcm 898299 - 898952 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 685 900268 - 900300 + G 79 -9.5 -3.47617 | opp_overlap 900279 900288, overlap 900269 AAAATTTGGTAATCA TTTATTAGTAATATT AGT AATATTACTAATAGG TTCTGGATTTGGAAT TERM 686 900269 - 900299 + G 81 -10.8 -2.68088 | opp_overlap 900279 900288, overlap 900268 AAATTTGGTAATCAT TTATTAGTAATATT AGT AATATTACTAATAG GTTCTGGATTTGGAA TERM 687 900884 - 900867 - g 72 -2.7 -5.27938 | ACTCGCAAATAAAAA CAATTAC TGTG GTATTTG TAATGATTTTTATCA TERM 688 901051 - 901067 + G 86 -10.9 -3.16475 | AATTGCTATTGGTAT TGGCGTT GAT AACGCCA TTCACTATATCCATC COSY_0866 898955 - 901336 + | hypothetical protein nadB 901396 - 902967 + | L-aspartate oxidase TERM 689 903200 - 903185 - g 72 -2.6 -5.30575 | TAAAAATCGAAAAAA TAACTC ACAA AAGTTA CTACAAAAACAACAC def 902964 - 903506 + | polypeptide deformylase TERM 690 904870 - 904847 - g 83 -7.5 -4.82154 | opp_overlap 904847 AACCCACATCAAAAA GCTGCTTTC TATGTT GAAAGCAAC TTATCAGAATCTTGT purH 904190 - 905731 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase dbpA 907534 - 906146 - | ATP-dependent RNA helicase DbpA TERM 691 906937 - 906951 + g 79 -10 -3.1829 | opp_overlap 906932, overlap 906935 TAATAGGAGACCTCA TCACGC GCT GCGTGA TATTGGTAATAGTAT TERM 692 907728 - 907745 + H 81 -7.1 -4.78237 | CTTCAAACTTTCTTC TTGAATC TTAT GATTCAA TTTTCTTGTAACATA COSY_0871 907791 - 908348 + | 5-formyltetrahydrofolate cyclo-ligase COSY_0872 909891 - 908710 - | UbiH/COQ6 monooxygenase family protein TERM 693 908747 - 908776 + g 89 -11.7 -3.41234 | opp_overlap 908752, overlap 908752 CCTGAAGCTTGTTTT TGAAAGTAAGATT TTAA AGTCTTACTTTCA TTAATTAAATTCATA pmbA 911210 - 909891 - | peptide maturation protein PmbA TERM 694 910292 - 910307 + g 76 -2.6 -5.40072 | GAACCTGACCATTCT TAACAA AATA TTGTTG TTTTTTTAGCACGCC TERM 695 910786 - 910757 - G 71 -8.8 -3.04398 | opp_overlap 910757, overlap 910756 CCTTGCCTTGAAAAC TTGATAATTCAG CACCAT CTGAACTATCAA TATATTTTTGTTCTA COSY_0874 911962 - 911264 - | hypothetical protein corC 912810 - 911962 - | magnesium/cobalt efflux protein COSY_0876 913145 - 912849 - | hypothetical protein hisA 913866 - 913135 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase gcp 916201 - 915176 - | O-sialoglycoprotein endopeptidase COSY_0879 916961 - 916239 - | ABC transporter ATP-binding protein TERM 696 917194 - 917184 - R 79 -4 -5.81032 | TAATCCTAAAAAAAA TAAC TCA GTTA CAAATGAAAAATTAA birA 917990 - 917232 - | bifunctional biotin biosynthesis protein BirA TERM 697 918914 - 918902 - g 88 -7.7 -5.04325 | GGTAAAGGAGAAAAA CCCAT TGA ATGGG TGAGAGAGGTTTTGA truA 918269 - 919012 + | tRNA pseudouridine synthase A TERM 698 919099 - 919062 - f 100 -13.9 -4.34947 | opp_overlap 919065 919069 AATATATTACTAAAA CAATCAACATATATTTA TTAA TAAATATATGTTGATTA AATTCGCACAAACAA TERM 699 919065 - 919096 + F 100 -13.4 -3.17075 | opp_overlap 919062, overlap 919069 ATATTACTAAAACAA TCAACATATATTTA TTAA TAAATATATGTTGA TTAAATTCGCACAAA TERM 700 919069 - 919092 + F 74 -8.4 -3.4052 | opp_overlap 919062, overlap 919065 TACTAAAACAATCAA CATATATTTA TTAA TAAATATATG TTGATTAAATTCGCA TERM 701 919228 - 919238 + F 80 -2.6 -6.04419 | TTAGCAATGTTATGA TTAT GGT ATAA TTTTTTTATTATTTT COSY_0882 919277 - 921220 + | sulfur deprivation response regulator TERM 702 921202 - 921214 + F 70 -6.3 -4.20084 | overlap 921177 921201 TGTGATGATGTCAAT GATGA GTA TCATC TTTTAGATAACTACT cynT 921286 - 921876 + | carbonic anhydrase rimM 922321 - 921911 - | 16S rRNA processing protein RimM TERM 703 922066 - 922078 + g 78 -7.7 -4.23045 | opp_overlap 922066 TAAACACTTTACCAA GCACA AAT TGTGC TTTATTAACTACTTC rpsP 922762 - 922472 - | 30S ribosomal protein S16 purB 924203 - 922827 - | adenylosuccinate lyase acnB 924327 - 926903 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 704 926932 - 926913 - T 70 -5.1 -4.81852 | opp_overlap 926913, overlap 926908 GCATAATCAATAAAA GAATTTC AAATAA GAAATTC TTTTTACTAATATTT TERM 705 926913 - 926932 + T 70 -5.1 -4.81734 | opp_overlap 926913 926908 GCATAATCAATAAAA GAATTTC AAATAA GAAATTC TTTTTACTAATATTT rpmG 927115 - 926960 - | 50S ribosomal protein L33 TERM 706 927029 - 927046 + g 77 -5.5 -4.91852 | overlap 927031 TTTTTTAACTTCTAC CTTCTCC GGAT GGAGACG TTTATTTTTAGTGGC rpmB 927360 - 927112 - | 50S ribosomal protein L28 TERM 707 927528 - 927512 - R 72 -8.7 -2.52676 | GAGTGGCTGAATGCA CCGGTCT TGA AAACCGG CAAGGGCTAATACCC pyrE 928689 - 928066 - | orotate phosphoribosyltransferase TERM 708 928818 - 928798 - g 88 -6.9 -4.90477 | GATAAAAAATCAAAA TGCAGAC GTAGTTT GTCTGCA AGAAATCAAGGCAAC xthA 928715 - 929485 + | exodeoxyribonuclease III COSY_0893 930228 - 930911 + | S-adenosylmethionine-dependent methyltransferase COSY_0894 930913 - 931365 + | FxsA protein TERM 709 931929 - 931919 - g 73 -4 -5.06451 | opp_overlap 931919 TATTATGCGAAAAAA TACA CCT TGTA TTTGTGCTGATATTA TERM 710 932156 - 932130 - g 76 -7.4 -3.90906 | AATGAAATTAAAAGA GGCATTAAATAT GTG AAACTTAATGCC AGATTCCAAATAGAA folC 931353 - 932567 + | bifunctional folate biosynthesis protein FolC TERM 711 933068 - 933048 - g 77 -8.5 -3.59109 | opp_overlap 933048 933047 TTAGATATTATAGAA GTATTTATT GAT AATAAATAC ATTCGTATAAGTGTA COSY_0896 932613 - 933464 + | hypothetical protein purF 933475 - 934992 + | amidophosphoribosyltransferase metB 935018 - 936184 + | O-succinylhomoserine sulfhydrylase fabA 936213 - 936722 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 712 937402 - 937370 - g 82 -10 -3.6279 | gap 1, opp_overlap 937370 AAATTCCCTGAACAA GCC-TCTCGTGCTTT TGAC AAAGGACGAGATGGC TTTATAATTTCTGGG TERM 713 937370 - 937402 + G 93 -10 -4.17701 | gap 1, opp_overlap 937370 AAATTCCCTGAACAA GCC-TCTCGTGCTTT TGAC AAAGGACGAGATGGC TTTATAATTTCTGGG fabB 936722 - 937936 + | 3-oxoacyl-[acyl-carrier-protein] synthase I/II TERM 714 938060 - 938080 + T 75 -8.5 -3.48578 | opp_overlap 938048 938060 938064, overlap 938058 938064 CGACTATTTAATAAA TAAACATAT AAT ATATGTTTA TATTCTCTTATATAT TERM 715 938080 - 938060 - T 80 -8.5 -4.21974 | opp_overlap 938060 938058 938064, overlap 938048 938064 CGACTATTTAATAAA TAAACATAT AAT ATATGTTTA TATTCTCTTATATAT secF 939292 - 938378 - | preprotein translocase SecF subunit TERM 716 938727 - 938713 - G 79 -8.6 -3.85518 | AAGAGTAACCAATAA CTGCTA ATA TAGCAG CCAGTACCGTCAAAT secD 941136 - 939289 - | preprotein translocase SecD subunit TERM 717 939987 - 939997 + g 71 -5.4 -4.64144 | TGGTACGCTTCTTAA TGGT TTT ACCA TTTTTAACAATTGTT yajC 941493 - 941152 - | preprotein translocase YajC subunit serS 942804 - 941515 - | seryl-tRNA synthetase COSY_0905 942804 - 943175 + | rhodanese family protein TERM 718 943262 - 943277 + G 76 -7.6 -3.95852 | opp_overlap 943261 AACCATTGATGATAT TGCTAG CACA CTAGCA TTTAATTCATGGCGT TERM 719 943804 - 943793 - g 73 -4.4 -4.8855 | AAAAAATAAAAACAA GATC CCTA GATC CAAACGAAAATCAAT COSY_0906 943209 - 943838 + | hypothetical protein TERM 720 944257 - 944279 + G 77 -6.2 -4.79174 | GAAATAGAACGCATT TCTGGTTCAC TAA GTGCCCCAGA TTTTATTAATTGGGT trxC 943888 - 944310 + | thioredoxin TERM 721 946280 - 946296 + T 86 -9.4 -4.08546 | TTGGACTTCTGGCGA GGGGGT TTTTC ACCCCC TTTATCGTTACTCAT TERM 722 947074 - 947085 + T 75 -7.2 -4.2354 | AGGTTCTATTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 723 947728 - 947765 + T 100 -10.1 -5.38326 | opp_overlap 947735 947739 947749 TTAGTATTTCACCTT GAATTCACAAATTATGA TAAA TCACAATTAGTGAATTC TTTTTATTTCATTGA TERM 724 947872 - 947848 - T 75 -9.5 -2.62442 | opp_overlap 947846, overlap 947847 947851 ATGCAATACACCAAT GAAGACTATTA TGA TAATAATCTTC GCGTTGTTATATTGT TERM 725 947993 - 947957 - T 70 -4.7 -4.91109 | opp_overlap 947952 947957 GGTGCAGTATAAAAA CTTAAACAAAACAAC AATTAAA ATTTTTTTGTTTAAG TTTTCTTTTGCACAA TERM 726 948339 - 948316 - T 70 -4.6 -4.94902 | opp_overlap 948316 948310, overlap 948307 CAATCATCATAAAAA TTACCTCACA TTAG TGTGATGCAA TTCTTATTATCTTTA COSY_0913 950752 - 950273 - | rhodanese family protein narL 951387 - 950758 - | two-component system, nitrate/nitrite response regulator narX 952868 - 951384 - | two-component system, nitrate/nitrite sensor histidine kinase TERM 727 951610 - 951596 - G 70 -4.2 -4.67038 | opp_overlap 951596, overlap 951591 951598 CTGCCAAAAGTAAAA CACGTA CAT TACGAG CTTTAGCATGTTTAC trmE 954252 - 952909 - | tRNA modification GTPase gshA 955814 - 954252 - | glutamate--cysteine ligase TERM 728 956657 - 956628 - g 70 -3.6 -4.93318 | TACAAGCTACAAAAA CCCATCCTAA ACTTCTACCA TTAGGCTGGG ATAACGCTAAAGAAG COSY_0918 956171 - 956785 + | hypothetical protein TERM 729 956866 - 956836 - f 78 -9.3 -3.10589 | opp_overlap 956840 TAAAAATCCTCAATA TACATACATAATA CAACT TATCATGTATGTA TAAGCATTTTACCTA TERM 730 957116 - 957173 + F 70 -5.99999 -4.21792 | opp_overlap 957124 957127 957135, overlap 957124 957135 TAATCAATAATTCTA TCTTAAT-ATGATTTCTAAATGCACCAC TTTC GTGGTGCATTTAGAAA-CATTAATATAA TATTTTTTACGTTAT TERM 731 957124 - 957164 + F 100 -18 -3.34401 | gap 1, opp_overlap 957124 957127 957135, overlap 957116 957135 AATTCTATCTTAATA TGATTTCTAAATGCACCAC TTTC GTGGTGCATTTAGAAA-CA TTAATATAATATTTT TERM 732 957164 - 957124 - f 100 -18 -3.0634 | gap 1, opp_overlap 957124 957116 957135, overlap 957127 957135 AATTCTATCTTAATA TGATTTCTAAATGCACCAC TTTC GTGGTGCATTTAGAAA-CA TTAATATAATATTTT TERM 733 957162 - 957127 - f 100 -20.8 -2.75074 | opp_overlap 957124 957116 957135, overlap 957124 957135 TCTATCTTAATATGA TTTCTAAATGCACCAC TTTC GTGGTGCATTTAGAAA CATTAATATAATATT TERM 734 957154 - 957135 - f 95 -12.2 -3.59087 | opp_overlap 957135 957124 957116, overlap 957127 957124 AATATGATTTCTAAA TGCACCAC TTTC GTGGTGCA TTTAGAAACATTAAT TERM 735 957135 - 957154 + F 95 -12.2 -3.55801 | opp_overlap 957127 957124 957135, overlap 957124 957116 AATATGATTTCTAAA TGCACCAC TTTC GTGGTGCA TTTAGAAACATTAAT TERM 736 959686 - 959674 - g 71 -7.7 -3.61001 | overlap 959672 GTGGAGAAAAACACA TGTGG GAT CCACA AACAATTTCTCACTT TERM 737 960599 - 960613 + G 70 -7.2 -3.77808 | ATTTTCAACTGCACC CCTAAT CAC ATTAGG TTGTATTATGATGCG gltB 957234 - 961754 + | glutamate synthase (NADPH) large chain TERM 738 961805 - 961791 - T 71 -8.6 -3.00601 | opp_overlap 961791 961790 TAAACCATAATGACA GCTTAC TTT GTAAGC ATTAGTATGTATTCC folA 962298 - 961807 - | dihydrofolate reductase TERM 739 962476 - 962464 - g 77 -3.3 -5.5604 | overlap 962465 TGAATCAAGAAAAAA GGGTG AAA CACCT GAGAAATTAGTTTAC maf 962354 - 962959 + | septum formation protein Maf TERM 740 965203 - 965185 - g 70 -2.4 -5.30616 | overlap 965188 GGAGTTAAACAAAAA GAAGCTTT AAA AAAACTAC GAGGACAAAGTGATA mfd 962962 - 966399 + | transcription-repair coupling factor COSY_0923 967355 - 966414 - | carbohydrate kinase TERM 741 966640 - 966653 + g 73 -3.9 -5.12068 | TCTACTTTAACAGGG GTAAT ATTG ATTAC TTTTTCTTCAGTATG TERM 742 967023 - 967007 - G 77 -5.9 -4.78107 | overlap 967014 CACCAGGATGAAAAA CAGTAAT TTG ATTACCG CTCATATCAGTGGTA lytB 968350 - 967424 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 743 967997 - 968017 + g 74 -2 -5.54907 | ACCCTTATGCCCAAT TAAAATTA CCTGA TAATTTTG TTTTTGTTTTCTAGC COSY_0925 968754 - 968347 - | FKBP-type peptidyl-prolyl cis-trans isomerase 2 TERM 744 968463 - 968474 + g 72 -5.8 -4.27316 | opp_overlap 968450 968463 968462 AACCTACATAAGAAT CTCC TATA GGAG TTTTAAATTCAACAA accD 969595 - 968747 - | acetyl-CoA carboxylase carboxyl transferase subunit beta trpA 970412 - 969615 - | tryptophan synthase alpha chain hemE 971451 - 970414 - | uroporphyrinogen decarboxylase TERM 745 971492 - 971521 + r 100 -13.1 -3.45381 | opp_overlap 971492 971499 971500, overlap 971500 CACTATAGTCAGACA TAAAAAAGGCCAC TTTC GTGGCTTTTTTTA TTGAATTTTGTCTTC TERM 746 971521 - 971492 - R 85 -10.9 -2.93858 | opp_overlap 971492 971500, overlap 971499 971500 CACTATAGTCAGACA TAAAAAAGGCCAC TTTC GTGGCTTTTTTTA TTGAATTTTGTCTTC TERM 747 971514 - 971499 - R 76 -4.6 -5.4251 | opp_overlap 971492 971500, overlap 971492 971500 GTCAGACATAAAAAA GGCCAC TTTC GTGGCT TTTTTTATTGAATTT TERM 748 971500 - 971513 + r 100 -8.1 -5.83226 | opp_overlap 971499 971492 971500, overlap 971492 TCAGACATAAAAAAG GCCAC TTTC GTGGC TTTTTTTATTGAATT TERM 749 971513 - 971500 - R 78 -8.1 -3.84422 | opp_overlap 971500 971492, overlap 971499 971492 TCAGACATAAAAAAG GCCAC TTTC GTGGC TTTTTTTATTGAATT rpmE 971749 - 971537 - | 50S ribosomal protein L31 COSY_0930 974236 - 971831 - | cation-transporting P-type ATPase TERM 750 973322 - 973308 - G 83 -10 -3.85505 | overlap 973305 TTATTAATAACATAA GCAACC TTA GGTTGC AACTGCTGCAATGCA COSY_0931 974447 - 975118 + | hypothetical protein TERM 751 975701 - 975691 - g 71 -6.8 -4.21631 | overlap 975693 AATTGACTCAAGAAA CACC CAA GGTG AGCTGTATCTAACTG TERM 752 976416 - 976406 - g 71 -5.4 -4.4891 | opp_overlap 976413, overlap 976410 TCTACCATCACAAAA TCAG TAT CTGA AAATCAGTTAAGTGT glmU 975128 - 976477 + | bifunctional peptidoglycan biosynthesis protein GlmU trpB 978248 - 977043 - | tryptophan synthase subunit beta trpF 978853 - 978245 - | N-(5'-phosphoribosyl)anthranilate isomerase COSY_0935 979561 - 978854 - | hypothetical protein topA 982657 - 980324 - | DNA topoisomerase I TERM 753 981555 - 981567 + g 71 -7.7 -3.53012 | TTAGTTTTTTGTAAC TGAGC ATC GCTCA TTTGACAAGACAAAG TERM 754 982501 - 982535 + g 83 -5.8 -5.07486 | opp_overlap 982500 982501 982503, overlap 982504 CGGTGATTTCATAAG TAGGGGTAAAGTTATT ATC AATATCTATACCCATA TTTTTCTTAGGCATA smg 983148 - 982657 - | Smg protein rpmH 984186 - 984326 + | 50S ribosomal protein L34 rnpA 984336 - 984677 + | ribonuclease P protein component COSY_0940 984677 - 984892 + | hypothetical protein TERM 755 986017 - 986033 + G 83 -8.1 -4.4009 | TTATCATCCTTACTT TGCTAAT CAA ATTAGCA TTTTATAAACTCAGC COSY_0941 984912 - 986537 + | hypothetical protein COSY_0942 986546 - 987406 + | hypothetical protein TERM 756 988201 - 988190 - g 73 -4.4 -4.91109 | CCGTTATGAGAAAAA TTGG TCTG CCAA TCGCTGTTTCGAATG kdsC 987820 - 988353 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase atpC 989383 - 988967 - | F0F1 ATP synthase subunit epsilon atpD 990763 - 989384 - | F0F1 ATP synthase subunit beta TERM 757 990020 - 989999 - G 80 -9.5 -3.70109 | CATACGACCTAATAA TGCAGATAC TTCC GTACCTGCA AGTGTATAACGATAA atpG 991652 - 990786 - | F0F1-type ATP synthase gamma subunit atpA 993207 - 991666 - | F0F1-type ATP synthase alpha subunit TERM 758 992360 - 992373 + g 73 -8.1 -3.53012 | opp_overlap 992354 CCCGGATAAGCCTCA CGTCC TGGA GGACG TTTAAGCAACAAAGA atpH 993785 - 993234 - | F0F1-type ATP synthase delta subunit TERM 759 993263 - 993278 + g 77 -6.1 -4.66987 | opp_overlap 993263 ATAAACGCAAACCTA GCTCG TCCACC CGAGC TTTTATTGAGATATC atpF 994265 - 993792 - | F0F1-type ATP synthase B subunit atpE 994534 - 994301 - | F0F1 ATP synthase subunit C atpB 995416 - 994562 - | F0F1 ATP synthase subunit A TERM 760 994641 - 994622 - G 70 -3.6 -4.97405 | AGTCATAAAAATAAA TGCTTGTA ATAA TACAATCA AAATATGAAAAATTG COSY_0952 995763 - 995416 - | hypothetical protein sqr 995954 - 997240 + | sulfide-quinone reductase COSY_0954 998785 - 997967 - | NAD+ kinase TERM 761 998423 - 998435 + g 74 -3.5 -5.34857 | TGCTAAAAAATTATC TAATA TTC TATTA TTTTGTTTTATTTGA grpE 998909 - 999484 + | molecular chaperone GrpE TERM 762 1001778 - 1001792 + G 80 -6.4 -4.82548 | overlap 1001779 1001780 ATTTACAAGTATTAT TCCAAG ATC CTTGGG TTTTGTCTATTTTTA dsbD 1000568 - 1002799 + | thiol:disulfide interchange protein DsbD TERM 763 1002844 - 1002858 + F 72 -5 -5.0707 | ATCTTGCATAATATT GATGGT AAA ATCATC TTTATTTTTATCTTT aroQ 1002888 - 1003337 + | 3-dehydroquinate dehydratase II accB 1003338 - 1003784 + | acetyl-CoA carboxylase biotin carboxyl carrier protein accC 1003790 - 1005145 + | acetyl CoA carboxylase biotin carboxylase subunit argC 1005142 - 1006164 + | N-acetyl-gamma-glutamyl-phosphate reductase COSY_0961 1006174 - 1006527 + | iron-sulfur cluster insertion protein ErpA TERM 764 1007300 - 1007290 - g 73 -4 -5.04249 | CGCCTAAAAAATAAA CAAA TCA TTTG GGGTATGGGGCATAG gltA 1006531 - 1007667 + | methylcitrate synthase TERM 765 1008033 - 1007991 - g 74 -6.6 -4.37247 | gap 2, opp_overlap 1007991 1007991 AAATTAACTAATAAA GGTATTTTTGGCGTTGAGTT TATAC AACTCAACGC-ACAA-TACC TACCTTTTAAAAATA ubiE 1007670 - 1008410 + | ubiquinone/menaquinone biosynthesis methyltransferase UbiE COSY_0964 1008639 - 1008968 + | hypothetical protein TERM 766 1009247 - 1009231 - g 72 -5.1 -4.68539 | AGCAAAACTACAAAA CAACTGC CCT GCATTTG ACCCAATAAAAGCTA ubiB 1008944 - 1010557 + | ubiquinone biosynthesis protein TERM 767 1010673 - 1010689 + F 87 -3.6 -6.20267 | ATATCTTTTATATAA CGTCGC CCATT GCGGTG TTTTTTTATTTTTGG rplY 1010714 - 1011391 + | 50S ribosomal protein L25 TERM 768 1011537 - 1011527 - g 84 -5.4 -5.49809 | opp_overlap 1011527 GAAATTTTAAAAAAA GAAC TAA GTTC TTTGGTGAAGTCACC pth 1011403 - 1011984 + | peptidyl-tRNA hydrolase TERM 769 1012711 - 1012686 - g 88 -7.1 -5.10665 | gap 1, overlap 1012688 ATCCAACAAAGAAAA TA-CACAAATTG TCA CAATTTGTGCTA AAACAGAAGATGAAA TERM 770 1012708 - 1012688 - g 100 -11.3 -4.16668 | overlap 1012686 CCAACAAAGAAAATA CACAAATTG TCA CAATTTGTG CTAAAACAGAAGATG COSY_0968 1011997 - 1013088 + | GTP-dependent nucleic acid-binding protein EngD TERM 771 1013217 - 1013202 - g 73 -4 -5.07971 | overlap 1013205 TAAAACAACCAAAAA TAATGC TATT GCACTA GCAAATACATCAGTT TERM 772 1014596 - 1014574 - g 75 -8.4 -3.74626 | ATGAAACCAGGGAAA GGCGCATTGT CAG ACATTGCACC AACATTATTAGCAAT gpm 1013131 - 1014669 + | phosphoglyceromutase rpe 1014700 - 1015371 + | ribulose-phosphate 3-epimerase TERM 773 1015691 - 1015722 + G 71 -5.2 -4.59944 | gap 1 TACACTTTGGTCACC GTGC-TCGTTTCTGG CAC CCAAAAATGAAGCGC TTTATTTATGGTACT TERM 774 1016401 - 1016383 - g 74 -2.4 -5.54079 | CCAAAAATTAAAAAA GCACCTGT TGA ACAAATAC TAGTAAAAAAAAGTT rpsB 1015636 - 1016421 + | 30S ribosomal protein S2 TERM 775 1016604 - 1016579 - f 72 -8.5 -3.16785 | opp_overlap 1016567, overlap 1016567 1016577 CATTATACCAATACA TTGTTATATCT TAAA AGATACAACAA AAATAGGAAATTAAT TERM 776 1016794 - 1016774 - g 71 -3.3 -5.03747 | overlap 1016777 AAATCCGCTAAAAAA TTAGATCGT ATT ACAATCGAA GGCTTAGTCAAAATT TERM 777 1017276 - 1017263 - g 77 -3.1 -5.46129 | GAACAAAGCAAAAAA TCTGG AAAA CCAAA TAATATTATTGAAAA tsf 1016621 - 1017493 + | translation elongation factor EF-Ts TERM 778 1017896 - 1017877 - T 80 -8.6 -4.36595 | opp_overlap 1017877 TATGTAAATGTAAAA GACCACCA TAAA TAGTGGTC TTTATTTAATCCTTA TERM 779 1017877 - 1017896 + T 75 -6.4 -4.53349 | opp_overlap 1017877 TATGTAAATGTAAAA GACCACCA TAAA TAGTGGTC TTTATTTAATCCTTA COSY_0973 1018544 - 1017960 - | hypothetical protein TERM 780 1018512 - 1018531 + g 89 -9.4 -4.2349 | opp_overlap 1018512 ATTTAAAAGTATTAA CTCTCTTA TTCT TAAGAGAG TTTTAAGTATCAAAC TERM 781 1018531 - 1018512 - G 79 -9.4 -3.37935 | opp_overlap 1018512 ATTTAAAAGTATTAA CTCTCTTA TTCT TAAGAGAG TTTTAAGTATCAAAC TERM 782 1018806 - 1018828 + r 77 -7.9 -4.13945 | opp_overlap 1018800 AACTAACAATAATTT TATTACTCT ATAAG AGAGTAATA TTTTGAACTAAAAAT COSY_0974 1019588 - 1019178 - | hypothetical protein TERM 783 1019367 - 1019350 - G 76 -2.7 -5.56372 | overlap 1019352 AAAGTAAAAGAAAAA TCGGTTA ACAT CAACCAA TTACTAGGCTTAACC TERM 784 1019973 - 1020021 + r 100 -13.8 -2.57963 | gap 1, opp_overlap 1019973 1019982 1020018, overlap 1019968 1019974 TTTTATTATCCAATA TTTATACTATTGATTTTAATATC AATA GATATTAAAATCAATAG-ATAGA ATTAATACTTCTAAC TERM 785 1020021 - 1019973 - R 90 -11.6 -3.10796 | gap 1, opp_overlap 1019968 1019973 1019974, overlap 1019982 1020018 TTTTATTATCCAATA TTTATACTATTGATTTTAATATC AATA GATATTAAAATCAATAG-ATAGA ATTAATACTTCTAAC TERM 786 1019974 - 1020022 + r 95 -11.6 -3.30474 | gap 1, opp_overlap 1019973 1019982 1020018, overlap 1019968 1019973 TTTATTATCCAATAT TTATA-CTATTGATTTTAATATC AATA GATATTAAAATCAATAGATAGAA TTAATACTTCTAACA TERM 787 1020013 - 1019982 - R 91 -13.4 -2.66787 | opp_overlap 1019968 1019973 1019974, overlap 1019973 CCAATATTTATACTA TTGATTTTAATATC AATA GATATTAAAATCAA TAGATAGAATTAATA TERM 788 1020146 - 1020119 - R 79 -8.6 -4.03167 | opp_overlap 1020119 1020126, overlap 1020126 CCATAATTTAAACAA TGATAAATCGTT ATTA AACGATATATCA TAAATTAAAAACAGT secG 1020753 - 1020382 - | preprotein translocase SecG subunit tpiA 1021499 - 1020753 - | triosephosphate isomerase TERM 789 1021446 - 1021461 + g 71 -7.6 -3.69437 | TACTAATATGTTAGT TGCTTC TTTA GAAGCA TTCATTTTCCAGTTA COSY_0978 1022087 - 1021569 - | hypothetical protein