TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.31887 %AT, 5044813 nt, 41674 terms. Intergenic: 0.372188 %AT, H2T: 493093 nt, 5256 terms; T2T: 178212 nt, 3747 terms; H2H: 217545 nt, 4502 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|167621562|ref|NC_010333.1| Caulobacter sp. K31 plasmid pCAUL02, complete sequence (length 177878) Caul_5292 1859 - 285 - | PAS/PAC sensor hybrid histidine kinase Caul_5293 2218 - 2018 - | transposase (class III) TERM 1 2728 - 2700 - H 70 -11.7 -3.16039 | AAGCAGTTGGAGCAA GCTCAGGTGATGA CTG CCATCACCCGTGC CGCGACCGCCATCGC Caul_5294 2709 - 3515 + | integrase family protein Caul_5295 3990 - 3496 - | hypothetical protein Caul_5296 5673 - 4405 - | cytochrome P450 Caul_5297 7359 - 5701 - | FAD dependent oxidoreductase TERM 2 6345 - 6385 + g 75 -9.8 -4.08692 | opp_overlap 6340, overlap 6342 GCTCAAGGGACGGGC GCTTGACCCCGAA-CGGGTG CGG CGGCTGCTTCGGGG-CAAGC TTTTCGGCGAGCTTC Caul_5298 8974 - 7364 - | acyl-CoA synthetase TERM 3 8581 - 8559 - G 73 -10.4 -3.86015 | TATCGCTCCGAGAAA GGCGCCGGCG GAT CGTCGTCGCC GATCTCAATGAACGT Caul_5299 10074 - 8986 - | acyl-CoA dehydrogenase domain-containing protein Caul_5300 11282 - 10074 - | acyl-CoA dehydrogenase domain-containing protein TERM 4 10671 - 10699 + g 72 -6.5 -4.25104 | GTGCCCGGTCATGGT CACCAGGGGGCGA ACC TCGATCCCCGGCG TTTTCATCGAAAAGA Caul_5301 11763 - 11332 - | hypothetical protein TERM 5 11587 - 11562 - G 77 -11.1 -3.92324 | gap 1 CGGTCCAAGAGTAAA GGCTGCCGGTCC CGC GGACTGGC-GCC CAGGCGAAATCTGGA Caul_5302 12935 - 11769 - | putative nonspecific lipid-transfer protein Caul_5303 14086 - 12992 - | alcohol dehydrogenase Caul_5304 14233 - 14808 + | carboxymuconolactone decarboxylase TERM 6 15225 - 15176 - g 82 -13.6 -3.80625 | gap 3, opp_overlap 15176 15180 CTGGGACAAGGGAAA GGCTGCCGTTCTGGGCGTCGAGGGC GTG GCCCGCGACGC-C-G-ACGGCGACC TTTTCCGGACCCACG TERM 7 15176 - 15225 + G 90 -13.6 -4.07568 | gap 3, opp_overlap 15176, overlap 15180 CTGGGACAAGGGAAA GGCTGCCGTTCTGGGCGTCGAGGGC GTG GCCCGCGACGC-C-G-ACGGCGACC TTTTCCGGACCCACG Caul_5305 14838 - 15689 + | 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase Caul_5306 15698 - 17734 + | NADH:flavin oxidoreductase/NADH oxidase Caul_5307 17757 - 18524 + | IclR family transcriptional regulator Caul_5308 18982 - 18539 - | thioesterase superfamily protein Caul_5309 20143 - 19001 - | 2-nitropropane dioxygenase NPD Caul_5310 21002 - 20193 - | enoyl-CoA hydratase/isomerase Caul_5311 21168 - 22025 + | alpha/beta hydrolase fold TERM 8 22492 - 22502 + G 70 -8.2 -3.88946 | TGAACCAGACTGTTT GCGC ACG GCGC TTCTTCTATGGCGTC Caul_5312 22446 - 22859 + | integrase/recombinase Caul_5313 23230 - 22877 - | response regulator receiver protein Caul_5314 23696 - 23376 - | type IV pilus assembly PilZ Caul_5315 24267 - 23833 - | response regulator receiver protein Caul_5316 27463 - 24254 - | multi-sensor hybrid histidine kinase TERM 9 26761 - 26739 - G 73 -7.6 -4.11394 | AGTTGAGCTTCAAAA GAGCCCTTGG CGG CCACGGCCTC CCTGACGCAGGCCGT Caul_5317 28803 - 27883 - | integrase catalytic region TERM 10 29266 - 29242 - g 78 -6.3 -4.56597 | overlap 29243 29245 29259 GCGGTTCGCCAAAAA GCAGCAGATGC AAT GGAGCCGCTGC GGCGCCCACCTGCTC Caul_5318 28970 - 29395 + | hypothetical protein Caul_5319 29942 - 29529 - | response regulator receiver protein Caul_5320 32643 - 29932 - | multi-sensor hybrid histidine kinase TERM 11 31080 - 31135 + g 78 -8.2 -4.2828 | gap 2, overlap 31081 GAAACTCCGCCTTCA CCCCCGCAGCGGCTTCGGCTTCGGCT CGCGCT AGCCGAAGCCGG-GCCTC-GAGGAGC TTTTGGTCGGTCACG Caul_5321 33238 - 32984 - | putative sensory transduction regulatory protein Caul_5322 33469 - 33762 + | hypothetical protein Caul_5324 35120 - 34800 - | hypothetical protein Caul_5325 35258 - 35851 + | hypothetical protein Caul_5326 35963 - 36910 + | beta-lactamase domain-containing protein TERM 12 36936 - 36956 + F 76 -12.5 -3.53091 | CATGACCTGAGGGGG GCGGGCCGT CAT AAGGCCCGC TTTCCCACGCCCGAT Caul_5327 37119 - 37520 + | hypothetical protein Caul_5328 37510 - 37761 + | hypothetical protein Caul_5329 37901 - 39124 + | hypothetical protein Caul_5330 40083 - 39121 - | P-type conjugative transfer ATPase TrbB Caul_5331 42113 - 40137 - | TRAG family protein TERM 13 40784 - 40794 + g 72 -8.2 -4.07568 | overlap 40777 CGTAGCCGGCCATTT CGCC CAT GGCG TTTTCCAGGAAGGGC Caul_5332 43624 - 42128 - | MobA/MobL protein TERM 14 42433 - 42469 + g 71 -11.3 -3.64703 | opp_overlap 42415 CGGCGGCGGCTTCCA GGCCGGGCTGCCGGCGC GCC GCGACGAACGCCTGGCC TTTCGGTGAGCGGAC Caul_5333 43884 - 44570 + | hypothetical protein Caul_5334 45469 - 44567 - | hypothetical protein TERM 15 44990 - 44939 - G 85 -15.9 -3.53811 | opp_overlap 44948 44962 TGGAGCGCCGCCAAA GTTCGTCA-GGCCCGGCGACACCGC GCCC GCGGCTTC-CCGGGCCGCGACGATC CGGGCGTTCTGGAAG TERM 16 45123 - 45094 - G 82 -15 -3.53012 | GCTGGGCCTCCGAAA CGGGCGGCAGAT TGCGCC AGCTGCCGCCCG CCCGCATCACCGGCT Caul_5335 46008 - 45469 - | conjugal transfer protein TraF TERM 17 46074 - 46086 + r 91 -9.1 -4.46514 | GCGCACTGGGAGACC GCGCA GGA TGCGC TTTCTTTGAGTGCCT TERM 18 46264 - 46217 - R 100 -17.2 -3.64822 | gap 2 AGCCGGTCACTGAAA CCCCGACGATCCGCCGAGTTGC CAATTC GCAACTCGGC-GATGG-CGGGG GAGCGCCAGGGAGCC Caul_5336 47349 - 46318 - | parB-like partition protein Caul_5337 48567 - 47362 - | cobyrinic acid ac-diamide synthase TERM 19 48577 - 48615 + r 75 -4 -4.7373 | gap 1, opp_overlap 48586 48587 TGCCATGGCCCTCTC CTTTGCAAATCTCCAAC GAGATG GCTGGA-ATTTGCCAAG TTTTTGGTCGGATGC Caul_5338 49841 - 48876 - | plasmid replication initiator protein-like protein Caul_5339 50456 - 50088 - | single-strand binding protein TERM 20 51048 - 51076 + r 84 -16 -3.07443 | gap 1, overlap 51051 CTTAGGAGAGATGCT CGGCCCCGCCCGG TTCG CCGGGCG-GGCTG TTGGCTAAAATCTCG TERM 21 51051 - 51074 + r 81 -15.2 -3.09505 | overlap 51048 AGGAGAGATGCTCGG CCCCGCCCGG TTCG CCGGGCGGGC TGTTGGCTAAAATCT TERM 22 51249 - 51274 + r 71 -13.9 -2.62192 | overlap 51248 GGAAGGGCAGGGGGA ACGGCGCCCGT CGAA GCGGGCGCCGA GTTAGTTCAGTGCCG Caul_5340 51502 - 51281 - | hypothetical protein TERM 23 51894 - 51882 - R 74 -10.5 -3.75629 | opp_overlap 51890 51893 CATCCTCAAGGTAAA CGGCG CAG CGCCG GGCCTGCCGCCTGGA Caul_5341 53092 - 52160 - | hypothetical protein Caul_5342 53686 - 54027 + | XRE family transcriptional regulator Caul_5343 54176 - 54508 + | XRE family transcriptional regulator TERM 24 54621 - 54635 + G 73 -7 -4.18018 | opp_overlap 54608 CATCCCGCCTGGTTG GCGGAC GCG GCCCGC TTTTCACTGGAGCCC Caul_5344 54501 - 55748 + | HipA domain-containing protein Caul_5345 56109 - 55855 - | hypothetical protein Caul_5346 57014 - 56253 - | DNA repair protein RadC TERM 25 56856 - 56892 + g 71 -11.3 -3.53811 | GTCGCTCAGGCTCGC CAGGCCGCCGGTCGCGG CCC TCGCGCCCAGCGTCCCG TTTGAGGGGGCTGGA Caul_5347 57561 - 57157 - | antirestriction protein-like protein Caul_5348 58556 - 57564 - | integrase family protein TERM 26 58535 - 58521 - G 71 -11.4 -3.62597 | opp_overlap 58532 CCGATCGGTGAAGAA GCGCTG GAT CAGCGC GGGCAAGGCGGCGGC Caul_5349 59494 - 58553 - | integrase family protein TERM 27 58926 - 58888 - G 77 -15.4 -3.13403 | gap 1, opp_overlap 58923, overlap 58886 TGTCGGTGACGAACA TCG-GCGTGACCGGATG GCCGAT CAGCCGGTCACGCTCGA CACGATAGTCGATCA Caul_5350 60702 - 59491 - | integrase family protein TERM 28 60329 - 60345 + g 70 -9.3 -3.9122 | opp_overlap 60326 GAGTGCGGAATACTG CGCGGAC TGA GGCCGCG TTGTTTGGCGAGATA Caul_5351 61424 - 60762 - | hypothetical protein TERM 29 61563 - 61536 - R 84 -11.2 -4.21194 | opp_overlap 61537, overlap 61537 GCGCATCACGCAAAA GGAGCCGCAGGC GCAA GCCCACGGCTCT TGATGACCTCTACGC TERM 30 61562 - 61537 - R 80 -14.7 -3.12395 | opp_overlap 61537, overlap 61536 CGCATCACGCAAAAG GAGCCGCAGGC GCAA GCCCACGGCTC TTGATGACCTCTACG Caul_5352 65838 - 61573 - | methylase/helicase TERM 31 65941 - 65951 + r 73 -8.2 -4.09243 | TCAGCGGCTGATCAG CGGG GAA CCCG TTTTAGCCGGCTATC Caul_5353 66361 - 65981 - | hypothetical protein TERM 32 66068 - 66078 + g 70 -8.2 -3.92178 | GTGCAGGTCGTAGCC CGGC CAG GCCG TTTCGTTCACCTCGT Caul_5354 66634 - 66368 - | prevent-host-death family protein TERM 33 66751 - 66723 - R 100 -16 -4.81359 | overlap 66740 AAGCCAAATAGAAAA GGACCCCGCCGG AATTA CCAGCGAGGTCC CCCTGGCAGCCAAGG Caul_5355 68855 - 66798 - | hypothetical protein Caul_5356 69872 - 68979 - | hypothetical protein TERM 34 69253 - 69208 - G 86 -12.6 -4.13767 | gap 1, overlap 69209 CCGGGCAGGCTAAAA CGTTCGGTGGCCGAGAGCGTG GTGAA CACCCCCTCGGCCACC-AGCA TCTCCGGCGCCGCCG TERM 35 70449 - 70431 - g 75 -10.2 -4.07568 | opp_overlap 70431 70430 70426, overlap 70432 70434 GGCCCGCCGCGAAAA CCAGGGCC GAT GGCCCCGA CTTCCTGATCTACGC Caul_5357 70328 - 70663 + | hypothetical protein Caul_5358 70795 - 71916 + | transposase IS116/IS110/IS902 family protein Caul_5359 72407 - 72802 + | hypothetical protein Caul_5360 73299 - 72799 - | hypothetical protein TERM 36 73042 - 73027 - G 83 -8.2 -4.62069 | overlap 73030 GTCGTATCGGAAAAA CAGGCG AAAG CGCCCG CCGCCGAACTTGGCG Caul_5361 73623 - 73303 - | AbrB family transcriptional regulator TERM 37 73484 - 73451 - G 90 -12.4 -4.43189 | gap 1 AGGAATTCCAGAAAA GCGCCCAG-CGCCGG GTCTT CCGGCGTCTCGACGC GGTGAAGACTCACCC TERM 38 73665 - 73648 - R 73 -8.5 -4.00042 | opp_overlap 73647 73648, overlap 73661 TCCTTCACCAAATAA GTAAGGA AAAA TCCTTAC CTTTGCAAGCGCCGA Caul_5362 74375 - 73782 - | mobile mystery protein B TERM 39 73861 - 73821 - G 70 -9 -3.83026 | gap 2 CGGTTTCAGATCAAA CCCATCGGCCGCCTTGATCG CGG CGATGTAGGCGGCC--CGGG TCTCGCCGGCGTGGA TERM 40 74247 - 74215 - G 75 -8.2 -4.15565 | opp_overlap 74214, overlap 74189 TCGAGGACGTCAAAA CGGCCCCGGCGCGC CCAGC GCAGGCCGGCGGCG ATGTTGGCGCGTTCC Caul_5363 74836 - 74372 - | mobile mystery protein A Caul_5364 76353 - 74947 - | hypothetical protein TERM 41 75822 - 75854 + g 70 -12 -3.29704 | gap 1, overlap 75821 75821 75818 GGTTCTTCTGGGACT GT-TCTAGGCGCCGG GATT CCGGCGCCTGGGCGC TATATTTCATCGGGA TERM 42 76530 - 76541 + r 72 -7.2 -4.17657 | opp_overlap 76512, overlap 76512 76505 TCCAGCGCCAACTGG CGGC TTTC GCCG TTTTAGGGTCTCGTC TERM 43 76822 - 76858 + r 72 -8 -4.12456 | gap 1, opp_overlap 76829, overlap 76829 AGCTTGATCGAATTT C-ACGAGAGCCCTCGAT TGCC GTCGGGGGCTTTCGCCG TTTTGGGCCTCATCT TERM 44 76829 - 76850 + r 70 -10.1 -3.66666 | opp_overlap 76829, overlap 76822 TCGAATTTCACGAGA GCCCTCGAT TGCC GTCGGGGGC TTTCGCCGTTTTGGG Caul_5365 77324 - 77070 - | hypothetical protein Caul_5366 77664 - 77326 - | hypothetical protein Caul_5367 78931 - 77675 - | conjugation TrbI family protein TERM 45 78517 - 78473 - G 71 -10.7 -3.61398 | gap 3, overlap 78474 GGCGCCGCCGAAGAA CGGGCTGGCCGAGCGAGC-GGC CAGC GCCTGCTCGCGCG-CC-GCCTG AACGGCGGGATCAAC Caul_5368 79972 - 78935 - | P-type conjugative transfer protein TrbG Caul_5369 80652 - 79969 - | conjugal transfer protein Caul_5370 81992 - 80679 - | P-type conjugative transfer protein TrbL TERM 46 82034 - 82051 + r 78 -6.9 -4.65916 | AGAGGCTGTCACGAT CGGGGAG GCGG CTACCCG TTTTATTGAAATAGA TERM 47 82241 - 82256 + r 78 -4.6 -4.72272 | GAAATCCGTGATGTT GGGGAG CGAG CTGCCC TTTTTGGTGAACGCA Caul_5371 82942 - 82220 - | P-type conjugative transfer protein TrbJ TERM 48 83172 - 83151 - R 85 -5.7 -5.07486 | overlap 83153 83154 GAGCGCCAAGAAAAA CAGCCGGCG ACGG CGACGGTTG GCGACCCACGCCAGG TERM 49 83164 - 83153 - R 72 -7.2 -4.16307 | overlap 83151 83154 GCGCCAAGAAAAACA GCCG GCGA CGGC GACGGTTGGCGACCC Caul_5372 85774 - 83300 - | CagE TrbE VirB component of type IV transporter system Caul_5373 86138 - 85872 - | type IV secretory pathway VirB3 family protein Caul_5374 86496 - 86140 - | conjugal transfer protein TrbC Caul_5375 86885 - 86568 - | hypothetical protein TERM 50 86780 - 86811 + g 73 -12.2 -3.53012 | gap 1, opp_overlap 86765 86766, overlap 86788 GGCGCTCAGCCGCAT CGAGCGAGGCC-GCG TCG CGCAGGCCAAGCTCG TTTACGAGCACGCGG Caul_5376 87076 - 86885 - | hypothetical protein Caul_5379 89837 - 88389 - | RND efflux system outer membrane lipoprotein Caul_5380 90015 - 90608 + | TetR family transcriptional regulator Caul_5381 90598 - 91692 + | RND family efflux transporter MFP subunit TERM 51 94007 - 94020 + G 75 -9.5 -4.03234 | opp_overlap 94005, overlap 93989 94013 CGACAGGGAAAAGGC CGCCC TCTC GGGCG TTTCTGTGGCGCAGA TERM 52 94192 - 94161 - g 70 -3.6 -4.4009 | opp_overlap 94191, overlap 94163 GTCGATCCGACAAAA CTGGACGGCCTGTT CGTG AACAACACGTCCGG TCAGCCCGTGGCCTT Caul_5382 91689 - 94976 + | acriflavin resistance protein TERM 53 95427 - 95410 - g 73 -10.5 -3.9392 | CGTCAGTCGAAAGAA GCCCACC GCCA GGCGGGC GCGGAGTCACGAGTC Caul_5383 95221 - 95691 + | late embryogenesis abundant protein TERM 54 96050 - 96017 - g 75 -8.2 -4.1673 | gap 1, overlap 96018 GAAGCCGCCAACAAA GCTTCTGAAGCTGCC GGGGA GGCAGC-CCAGAAGG CCGAGGAAGCAGTCC Caul_5384 95747 - 96223 + | hypothetical protein Caul_5385 97254 - 96706 - | ATP-dependent transcription regulator LuxR TERM 55 96923 - 96906 - G 70 -3.3 -4.39954 | overlap 96907 96908 TAAGAACAATAGAAA TCTCGCC GCTT GGCGAAC GAACGTTACGGTCGC Caul_5386 97523 - 97870 + | transposase IS3/IS911 family protein Caul_5387 97867 - 98214 + | IS66 Orf2 family protein Caul_5388 98285 - 99973 + | transposase IS66 Caul_5389 100792 - 99989 - | regulatory protein, LuxR TERM 56 100133 - 100113 - G 77 -3.2 -4.73682 | overlap 100114 100120 GCCGAGAATATAAAA TCGACAAC GCCAT GCTGTCGC ACAAATTCAAGAATG TERM 57 100776 - 100748 - G 73 -7.3 -4.16279 | overlap 100740 GACAGGAGCGGAAAA GCTGCCTCCGC GCAACAG GGGGGGGCAGC TCAGACCTCGCGTCA Caul_5390 101603 - 101034 - | TetR family transcriptional regulator Caul_5391 101710 - 102090 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_5392 102130 - 102813 + | anti-ECFsigma factor, ChrR Caul_5393 103228 - 102944 - | hypothetical protein Caul_5394 105273 - 103516 - | putative methyl-accepting chemotaxis sensory transducer TERM 58 105635 - 105604 - H 81 -3.7 -5.04385 | overlap 105606 CAGAGCCCCAAAAAA TGGTCGGCGAC-GCG TGTC CGCCGTCAGCG-CCA ATGAGACAGATTGAG Caul_5395 105703 - 106002 + | transposase IS3/IS911 family protein TERM 59 106814 - 106798 - T 100 -13.7 -4.33417 | TGCACCTACAAGAAA GCGCCCA TGC TGGGCGC ACAAACAAAAAGGGC TERM 60 106826 - 106851 + T 76 -12.5 -3.39895 | opp_overlap 106826 106828 GCGCACAAACAAAAA GGGCGACCCGG TTGC CCGGATCGCTC TTCCTTCATCCGAAA TERM 61 106851 - 106826 - T 100 -12.5 -5.38054 | opp_overlap 106826, overlap 106828 GCGCACAAACAAAAA GGGCGACCCGG TTGC CCGGATCGCTC TTCCTTCATCCGAAA TERM 62 106849 - 106828 - T 74 -13.7 -2.87964 | opp_overlap 106826, overlap 106826 GCACAAACAAAAAGG GCGACCCGG TTGC CCGGATCGC TCTTCCTTCATCCGA Caul_5396 109432 - 106916 - | TonB-dependent receptor Caul_5397 110076 - 110201 + | transposase IS3/IS911 family protein Caul_5398 112494 - 110878 - | hypothetical protein TERM 63 112967 - 112935 - R 71 -12.7 -3.10071 | opp_overlap 112935, overlap 112924 112923 AAACGGCACGCAATA GGGACCCCCTATCGG CGC CCAATAGGGACCCCC TTTCCGAGTTCGAGC Caul_5399 113836 - 113108 - | IstB ATP binding domain-containing protein Caul_5400 115331 - 113823 - | integrase catalytic region Caul_5401 115582 - 116364 + | IclR family transcriptional regulator Caul_5402 117214 - 118074 + | alpha/beta hydrolase fold TERM 64 118420 - 118446 + T 100 -16.6 -4.67904 | GGCGCGGTATACTTA GGCGGCGCAG CAACCAA CTGCGCCGCC TTTTTACACTTAATG TERM 65 118480 - 118492 + T 82 -3.4 -5.14965 | CAAGCGTTAGAATGT TGGA TTGAT TCCA TTTTTTGGTGGACAT Caul_5403 120373 - 118760 - | EmrB/QacA family drug resistance transporter TERM 66 119371 - 119338 - G 76 -3 -4.75308 | overlap 119330 119364 ACGAATAGGCAAAAA TCGCCATGCCCGCC CCGATC AGCAATCCTGGCGA CAGCCGGTCGCTCAT Caul_5404 121334 - 120360 - | secretion protein HlyD family protein TERM 67 120871 - 120919 + g 74 -11.5 -3.72576 | overlap 120872 CCCGTCTGGGTAACC TCGGCGCCCGCCTTTGCGCCG GAGATGG CGGCGCGGGCGCGGACGGCGG TTTGCTCGGCGGCCC TERM 68 121161 - 121139 - G 74 -14.8 -3.01712 | opp_overlap 121133 121158 TTTGCTGGGCCAACA GCTGCGCGCG CTG CGCGCGCAGA TTGGCGATGTTGGCG Caul_5405 121916 - 121488 - | MarR family transcriptional regulator Caul_5406 122724 - 122146 - | yecA family protein Caul_5409 124717 - 124364 - | IS66 Orf2 family protein Caul_5410 125055 - 124714 - | transposase IS3/IS911 family protein Caul_5411 125213 - 125052 - | hypothetical protein Caul_5412 126039 - 125281 - | IstB ATP binding domain-containing protein Caul_5413 127217 - 126060 - | integrase catalytic region TERM 69 127254 - 127240 - R 71 -5.6 -4.36914 | overlap 127243 127244 CCTCGCTCGATAAAA CGAGGG TCT CCCTAG CCCGGTCAGACTGTC Caul_5414 128128 - 127451 - | hypothetical protein Caul_5415 129072 - 128263 - | transposase Caul_5416 129548 - 129069 - | putative transposase Caul_5417 129904 - 129704 - | IS30 family transposase Caul_5418 131364 - 129973 - | RND efflux system outer membrane lipoprotein TERM 70 130623 - 130593 - G 71 -11.1 -3.55563 | overlap 130594 AGGTGAGGCTCGAAA TGGCTCCCCGG GGAACAGGT CCGGGGAGCCC CCCCAGCAGCAGGCG TERM 71 130622 - 130594 - G 70 -14.6 -2.73124 | overlap 130593 GGTGAGGCTCGAAAT GGCTCCCCGG GGAACAGGT CCGGGGAGCC CCCCCAGCAGCAGGC Caul_5419 132521 - 131364 - | secretion protein HlyD family protein Caul_5420 134270 - 132549 - | transporter, putative TERM 72 133859 - 133842 - G 82 -9.1 -4.4009 | gap 1 GGCGACGCCAGAAAA GGCG-CGC ACG GCGACGCC CGTTGGGAAGCTATG Caul_5421 134815 - 134267 - | TetR family transcriptional regulator Caul_5422 135200 - 134856 - | hypothetical protein Caul_5423 136605 - 135505 - | putative transposase Caul_5424 137229 - 136633 - | major facilitator family transporter Caul_5425 138434 - 137295 - | MobA/MobL protein Caul_5426 139081 - 138389 - | hypothetical protein TERM 73 138465 - 138479 + gr 78 -5.7 -4.57073 | GTCGATCCGCTCCAG CGTTC CGAGC GAACG TTTTTCACGCCCATG Caul_5427 139623 - 139117 - | hypothetical protein Caul_5428 139750 - 140229 + | hypothetical protein TERM 74 141635 - 141660 + F 72 -7.5 -4.11216 | CTATGTGCTGCAACG GGTCGAGGAGG GCAT CTTCCTGGGCC TTTTCAAGGTCGAGG TERM 75 142377 - 142355 - g 73 -10.4 -3.91897 | opp_overlap 142365 142367, overlap 142356 GTGCTGACGCACAAA CCGCCGCGCG GAG CCCGCGGCGT GGCCAGCCGGCTCTT TERM 76 142884 - 142856 - g 83 -14.5 -3.61715 | overlap 142824 GATGCGCGCGAACAA CGGCGCGTCAACG CCG CCTGGACGCGCCG GCGGCGTCTGGGCAA Caul_5430 142172 - 143086 + | hypothetical protein Caul_5431 144306 - 143083 - | 8-amino-7-oxononanoate synthase Caul_5432 144560 - 144309 - | acyl carrier protein, putative Caul_5433 145729 - 145034 - | plasmid pRiA4b ORF-3 family protein Caul_5434 146148 - 145783 - | transposase, mutator type TERM 77 146388 - 146360 - H 71 -13.2 -3.09492 | gap 1 CCTGGAACTGGAAGA CCCTGC-GCCAGG AGGC CCTGGCCGCAGAG GCGGCATGACGACGC Caul_5435 146394 - 146558 + | hypothetical protein TERM 78 146648 - 146665 + T 71 -14.1 -2.64416 | opp_overlap 146632, overlap 146647 CATCGGCGTCGCGCC GCGCGCC TTGC GGCGCGC ATTCTGCTCCAGGTC Caul_5436 150036 - 147361 - | ATP-dependent transcription regulator LuxR TERM 79 147809 - 147789 - G 71 -11.1 -3.66908 | overlap 147785 TCCCCGCAAAAGCAA CGGCGTTGC AGA GTAACGCCG CAACCTCCAAACTGC TERM 80 148771 - 148755 - G 76 -2.1 -4.72272 | opp_overlap 148770, overlap 148756 GGTCGTGACTAAAAA TCTGGGC CCA GGCCAGG CCAAGGGCGATTGTT TERM 81 148943 - 148954 + g 76 -2.2 -4.79451 | AGATTGATGCTTTCG CGAC TGTT GTTG TTTTGTCTTTGCCAT TERM 82 149857 - 149873 + g 71 -3 -4.66163 | gap 1, opp_overlap 149857 ATGCTCTGCCCAATA CTG-TGC CATC GCAACAG TTTTTCCGTAGCCCT Caul_5437 151071 - 150169 - | tISRso5; ISRSO5-transposase protein Caul_5438 152503 - 151265 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Caul_5439 152721 - 153932 + | alkane 1-monooxygenase TERM 83 153984 - 153934 - f 100 -24.3 -2.78384 | gap 2 CGGCGGCCGAGTAGA CGCCACTGCTAGCCGAGGAGGCTCG TTC CGAGC-TC-TCGGCTAGCAGTGGGG CGGGCCGGGATAGCG Caul_5440 154085 - 154303 + | rubredoxin-type Fe(Cys)4 protein Caul_5441 154300 - 154518 + | rubredoxin-type Fe(Cys)4 protein Caul_5442 154583 - 156043 + | aldehyde dehydrogenase TERM 84 156659 - 156685 + G 75 -5.7 -4.41348 | gap 1, opp_overlap 156659 GTCACCCAGCACAAA GGCCGGCGCTGG AGTT CC-GCGCGCGCC TTTCTTTCCAAGGCC Caul_5443 156092 - 157720 + | glucose-methanol-choline oxidoreductase Caul_5444 157811 - 158494 + | OmpW family protein Caul_5445 158550 - 160184 + | AMP-dependent synthetase and ligase Caul_5446 161682 - 160651 - | integrase catalytic region TERM 85 161030 - 161047 + g 77 -3.3 -4.78107 | overlap 161031 161032 CCGGCCATGATGCCC GTCGAGC TGCG GCTCGGG TTTTTGATCATGATC Caul_5447 162256 - 161945 - | XRE family transcriptional regulator Caul_5448 162579 - 162253 - | hypothetical protein Caul_5449 165115 - 162668 - | type III restriction protein res subunit Caul_5450 165675 - 165121 - | resolvase domain-containing protein Caul_5451 166675 - 165749 - | hypothetical protein Caul_5452 166795 - 168171 + | integrase catalytic region Caul_5453 168149 - 168907 + | IstB ATP binding domain-containing protein Caul_5454 169612 - 169109 - | TniB Caul_5455 169986 - 169579 - | hypothetical protein Caul_5456 171623 - 169980 - | integrase catalytic region TERM 86 171388 - 171363 - G 80 -16.1 -3.14344 | CACGGTCTCGATCAA GGCCGGGACGC GGCT GCGTCCCGGGC ACCATCCCCGCGCTC TERM 87 171613 - 171629 + g 71 -9.5 -3.72576 | GGACGCATATCCGGG TCATCGA CCA TCGATGA TTTCCTGGCGAGCGG Caul_5457 172128 - 172715 + | hypothetical protein TERM 88 173184 - 173205 + G 71 -2.2 -4.56597 | gap 1, opp_overlap 173183, overlap 173183 AACCTATGAGAGAAC CGTCC-GCG GACTG CGTAGGGCG TTTTTCGAGGCGGCG Caul_5458 172831 - 173496 + | DSBA oxidoreductase Caul_5459 174185 - 173613 - | resolvase domain-containing protein Caul_5460 175124 - 174258 - | hypothetical protein TERM 89 174551 - 174588 + g 72 -13.3 -3.16564 | ACAGGACATTGCGGC GAGACCGGACGCTCTGC CCCT GCAGGGCGTCCAGCCCC TTGATCGGCTCGGAG Caul_5461 176194 - 175301 - | TniB family protein TERM 90 175749 - 175703 - G 73 -13 -3.50869 | gap 2, overlap 175704 CAGCATGTTAGACAA CCGGCGCAAG-GCGG-CCAGCG TCTTG CGCTGGGCCGCGCCCGTGCCGA TCATCAGGTTGTTGG Caul_5462 177846 - 176188 - | transposase SEQUENCE gi|167621728|ref|NC_010335.1| Caulobacter sp. K31 plasmid pCAUL01, complete sequence (length 233649) TERM 1 1264 - 1234 - g 78 -8.3 -4.3739 | gap 1, opp_overlap 1253, overlap 1235 1238 GACCCGTCTACAAAA GGACTGACCCAGGC GCAC GCCTGGGCCA-TCG ACCAGGTGCTTGGCC Caul_5080 184 - 1437 + | peptidase S10 serine carboxypeptidase Caul_5081 1415 - 2725 + | peptidase S10 serine carboxypeptidase Caul_5082 3930 - 2722 - | aminotransferase class V Caul_5083 4415 - 3942 - | endoribonuclease L-PSP Caul_5084 5914 - 4412 - | peptidase S10 serine carboxypeptidase TERM 2 5784 - 5758 - G 70 -12.2 -3.34398 | overlap 5756 5759 GCGCGCCGCCAAAGA CGCCCTCGCCCG TCA CGGTCGAGGACA GGCTGGCGACGTCGG Caul_5085 6217 - 6987 + | aspartyl/asparaginyl beta-hydroxylase Caul_5086 7211 - 7642 + | OsmC family protein Caul_5087 8247 - 7657 - | TetR family transcriptional regulator Caul_5088 8339 - 9496 + | acetyl-CoA acetyltransferase Caul_5089 9517 - 10014 + | thioesterase superfamily protein Caul_5090 10437 - 10099 - | hypothetical protein TERM 3 10588 - 10578 - R 73 -8.2 -4.07885 | CACCCTTCTCTAAAA GCCG TTG CGGC TAAGCACGCCCACCT Caul_5091 11076 - 10603 - | hypothetical protein TERM 4 11166 - 11133 - R 100 -21.7 -3.01924 | opp_overlap 11135 GATGTCGGGCGAAGA GCGGCCGGACCGGGC CATC GCCCGATCCGGCCTC TATAGCGATCGCTCC TERM 5 11135 - 11164 + r 93 -20.7 -2.88663 | opp_overlap 11133 TGTCGGGCGAAGAGC GGCCGGACCGGGC CATC GCCCGATCCGGCC TCTATAGCGATCGCT Caul_5092 11960 - 11205 - | short-chain dehydrogenase/reductase SDR TERM 6 11670 - 11643 - G 75 -5.4 -4.59773 | opp_overlap 11646, overlap 11645 GGTGACTTCTAAAAA GGGCGCCGGG TTGTTGGC CCCGGCGTTC TGCACCGCCAAGGCT TERM 7 12029 - 12006 - R 71 -13.8 -2.52516 | overlap 12005 GCGCGCACGATGAAC GGGCCGGCGA CGCG TCGCCGGCCA TCAGCCTCACGCCAC Caul_5093 13373 - 12036 - | NtaA/SnaA/SoxA family monooxygenase Caul_5094 13954 - 13562 - | hypothetical protein TERM 8 14106 - 14050 - R 83 -6.3 -4.83169 | gap 1, opp_overlap 14052 14054, overlap 14051 14052 14054 ATCGCTCCAGAAAAA TTGAGCC-CCGTCGCGGGCGCGTCGG AAAGGG CCGACGCGCCGGCTGCAGAGGATCTG TTCAGGCCTTGATAT TERM 9 14052 - 14104 + r 71 -13.3 -3.04501 | gap 1, opp_overlap 14051 14050 14052 14054, overlap 14054 CGCTCCAGAAAAATT GAGCC-CCGTCGCGGGCGCGTCGG AAAGGG CCGACGCGCCGGCTGCAGAGGATC TGTTCAGGCCTTGAT TERM 10 14101 - 14054 - R 70 -12.5 -2.88667 | opp_overlap 14052 14054, overlap 14052 14051 14050 CTCCAGAAAAATTGA GCCCCGTCGCGGGCGCGTCGG AAAGGG CCGACGCGCCGGCTGCAGAGG ATCTGTTCAGGCCTT Caul_5095 14332 - 14108 - | hypothetical protein TERM 11 14366 - 14351 - R 76 -6 -4.56597 | opp_overlap 14357 14360, overlap 14352 GGTCTTCCTCAAAAA GGGGCC GCTT GGCCCG GGAGAGCTCGGCGCG Caul_5096 14715 - 14404 - | hypothetical protein Caul_5097 15532 - 14933 - | TetR family transcriptional regulator TERM 12 15560 - 15575 + H 71 -6.2 -4.33417 | opp_overlap 15559 15562 CTTGCTTGACGTAAT CATAGA GGTC TCTATG TTTATTGTCCATCGG TERM 13 15808 - 15791 - H 75 -14.1 -3.05384 | GTGCGCCCCAGCCAA CGCGCGC GATC GCGCGCG CCTGGCGGGCCGGTC TERM 14 16346 - 16378 + G 71 -11.2 -3.62096 | gap 1, overlap 16358 CTGGGTAATTGGGCC GGCTGGAGAGCGCCC TTCT GGGCGATCACC-GCC TTTGGCCTGCTGGCC Caul_5098 15884 - 17020 + | major facilitator transporter Caul_5099 17435 - 17052 - | hypothetical protein TERM 15 17111 - 17149 + g 76 -7.4 -4.26903 | gap 1 GGCAGGTGGAATAGT CGTCCGGCTCGCT-TGG CAGCAT CCACAGCGGATCGGGCG TTTTGCTGACATCGG Caul_5100 17857 - 17483 - | hypothetical protein Caul_5101 18285 - 17905 - | HxlR family transcriptional regulator Caul_5102 18980 - 18369 - | TetR family transcriptional regulator TERM 16 18559 - 18507 - G 72 -9 -3.96148 | gap 2, overlap 18508 18511 18536 CGCGCTGACCAGAAA GCGA-GCCGCGGCCGGCG-CGTCG AGACCAA CGTCGACGCCGCCCTCGGCCTGGC CGTCGCGAATGGCGT Caul_5103 20646 - 19138 - | RND efflux system outer membrane lipoprotein TERM 17 20553 - 20540 - G 71 -9.5 -3.72576 | GCTTGCCCCATGAAA GCGGC CGGC GCCGC CAAGGTCGGTCGAAC Caul_5104 20733 - 21350 + | TetR family transcriptional regulator Caul_5105 21425 - 22471 + | RND family efflux transporter MFP subunit TERM 18 24026 - 24067 + G 77 -15.1 -3.17051 | gap 1, opp_overlap 24039 24040, overlap 24025 GCTTGATCAGCGGCG CCGTCCACCACAAGGGCGTC GTG GTCGCCGTGGTGGTGG-CGG TCTTCGTCGTCGCCG TERM 19 24361 - 24345 - g 76 -2.1 -4.72272 | CGTGCTGACCAAAAA CCCCAAG GCC CGCGAGG AGCTCAAGCACCGCG TERM 20 24412 - 24372 - g 70 -14.5 -2.74012 | CGAGGAGCTCAAGCA CCGCGTGCGCCACGCCGTC GCC GCCGGCTTGGCGCCCGAAG CCAAGGTCCGCGCCA Caul_5106 22468 - 25617 + | acriflavin resistance protein TERM 21 25621 - 25666 + F 82 -11 -4.07568 | gap 1, overlap 25622 GCCGCGATCTAGGTG CGCCAACGGCCCGGCCGTCGC CTCGA GCGGCGGCCGGGCT-TCGACC TTTTAGAGGGGGAAC TERM 22 25622 - 25665 + F 78 -14.5 -3.04398 | gap 1, overlap 25621 CCGCGATCTAGGTGC GCCAACGGCCCGGCCGTCGC CTCGA GCGGCGGCCGGGCT-TCGAC CTTTTAGAGGGGGAA Caul_5107 25718 - 26395 + | TetR family transcriptional regulator Caul_5108 27353 - 26403 - | AraC family transcriptional regulator TERM 23 26467 - 26450 - G 100 -14.1 -4.56597 | GGCTGGCGCCAAAAA CGCGCGC AAAG GCGCGCG TAAAGTGCGGTTGGT TERM 24 27427 - 27450 + r 84 -16.7 -3.07443 | ATGGGCGGACAGGTG CGGGCGCGG TCTCAC CCGCGCCCG TTGGATCGGGTCTAA Caul_5109 27791 - 27462 - | hypothetical protein TERM 25 27832 - 27843 + H 76 -7.2 -4.2558 | CCGCCTCGATCCTCG CCGG TCAG CCGG TTTTGATAGAGACTA Caul_5110 28094 - 28711 + | TetR family transcriptional regulator Caul_5111 28986 - 28708 - | hypothetical protein Caul_5112 30246 - 29128 - | NADH:flavin oxidoreductase/NADH oxidase TERM 26 30166 - 30193 + g 75 -5.5 -4.62069 | overlap 30152 GTTTTCGGCACGGCC CCGGGTCATCG GGGCCA TGACGATCCGG TTTTTCAGCTCAAGA Caul_5113 31290 - 30316 - | alcohol dehydrogenase Caul_5114 31892 - 31293 - | NADP oxidoreductase coenzyme F420-dependent Caul_5115 32929 - 31916 - | alcohol dehydrogenase TERM 27 33155 - 33171 + H 71 -13.7 -2.64293 | opp_overlap 33140 33152, overlap 33154 33153 GCATACTAATCAGTA CGCTCGC CCC GCGAGCG GTATTCTATTCCGGA Caul_5116 33249 - 33872 + | TetR family transcriptional regulator Caul_5117 34000 - 34746 + | short-chain dehydrogenase/reductase SDR TERM 28 34802 - 34772 - f 82 -14.7 -3.29471 | gap 1, overlap 34774 TGTCGATCAGACCAA CAGGCCCGGTCGCG CTCG CGCGATCGGGCC-G CCGCCGCTTGAGGCC TERM 29 34801 - 34774 - f 91 -18.4 -3.214 | overlap 34772 TCGATCAGACCAACA GGCCCGGTCGCG CTCG CGCGATCGGGCC GCCGCCGCTTGAGGC TERM 30 36094 - 36124 + G 72 -8.3 -4.08767 | overlap 36092 36085 36084 GCGGGCGTGCTGATC GGCCAAGCGGC CGGTTCGGT GCTGTTTGGCC TTTTGGCGACCTGCG Caul_5118 34819 - 36180 + | multi anti extrusion protein MatE Caul_5119 37094 - 36177 - | LysR family transcriptional regulator TERM 31 36775 - 36759 - G 72 -6.5 -4.24602 | ATAGAGCGAAAAGAA CGCCG GCAGCAG CGGCG AAAGCGCCTGCAGAA Caul_5120 38086 - 37187 - | LysR family transcriptional regulator TERM 32 39340 - 39359 + G 75 -8.5 -4.13767 | overlap 39326 TCCCGGTGCGGATCG GCCTGGC CGACGA GCCGGGC TTTTCGCGTCAGGGC Caul_5121 38595 - 39785 + | RND family efflux transporter MFP subunit Caul_5122 39812 - 43030 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 33 43315 - 43364 + G 77 -11.3 -3.9226 | opp_overlap 43308, overlap 43334 GCCAATCAGGACGTG GCCGC-CGCCGCGGCCCGGGTCG AGCAGG CG-CGCGGGCTTCAGCGCGCGGC TTTGTCGGATCTCTT Caul_5123 43042 - 44574 + | RND efflux system outer membrane lipoprotein Caul_5124 44571 - 45551 + | luciferase family protein TERM 34 45560 - 45586 + T 100 -25.2 -3.04144 | GACCTAGAGGCTTTA GGGCCGCGAGGC AAA GCCTCGCGGCCC TGTTGCGGGTCAGGC Caul_5125 46513 - 45596 - | alpha/beta hydrolase domain-containing protein TERM 35 46840 - 46803 - g 72 -14.1 -3.19192 | gap 1, opp_overlap 46839 GTTCAGCGAATTCAA GCGCAGCCTGGGC-CTGG CCA CCAACACCCTGGCCGCGC GCCTCAAGGCGATGG Caul_5126 46675 - 47133 + | HxlR family transcriptional regulator Caul_5127 47198 - 47623 + | BadM/Rrf2 family transcriptional regulator TERM 36 47660 - 47642 - f 71 -6 -4.37886 | opp_overlap 47642 TTATTTGGCATAAAA TGTTGGAA TTA TTCCGACA TTATTTAGAGGAGTA TERM 37 47642 - 47660 + F 71 -8.2 -3.9122 | opp_overlap 47642 TTATTTGGCATAAAA TGTTGGAA TTA TTCCGACA TTATTTAGAGGAGTA Caul_5128 47680 - 48795 + | NADH:flavin oxidoreductase/NADH oxidase Caul_5129 48843 - 49235 + | 4-oxalocrotonate tautomerase TERM 38 49295 - 49237 - T 74 -12.4 -3.53444 | gap 3, opp_overlap 49286, overlap 49238 TGACTCTGGCCTAAA GTCG-GATCGGCC--AAGGCCGGCCGGGC GAGC GCCCGGCCGGCCCTCAGGCCTTCCCCGAG CGCTCGGACAAGTGG TERM 39 49294 - 49238 - T 78 -15.9 -2.71924 | gap 3, opp_overlap 49286, overlap 49237 GACTCTGGCCTAAAG TCG-GATCGGCC--AAGGCCGGCCGGGC GAGC GCCCGGCCGGCCCTCAGGCCTTCCCCGA GCGCTCGGACAAGTG Caul_5130 49891 - 49280 - | TetR family transcriptional regulator TERM 40 49610 - 49589 - G 82 -17.3 -2.98942 | ATCGGGGGACAGATA GCTGGCGGC GATC GCCGCCAGC CCTCCATGCTGAACT Caul_5131 51105 - 49897 - | major facilitator transporter TERM 41 51082 - 51060 - G 79 -7.7 -4.49389 | opp_overlap 51075, overlap 51061 AGGTCAGAACGAAAA GCGCGAG CGGCAGTGC CTCGCGC GGTTGAGGTTTGGAC Caul_5132 52151 - 51243 - | LysR family transcriptional regulator Caul_5133 52298 - 53422 + | NADH:flavin oxidoreductase/NADH oxidase Caul_5134 53506 - 54777 + | epocide hydrolase domain-containing protein Caul_5135 54795 - 55994 + | major facilitator transporter TERM 42 56008 - 56044 + F 91 -16.5 -3.60412 | opp_overlap 56009, overlap 56009 AGATCCGGCCGAGAC ACCTCCAGGCCTCGACC GGG GGGCCAGGCCTGGAGGA TTGTCTGTGGGGTTA TERM 43 56043 - 56009 - f 93 -20 -2.87344 | opp_overlap 56008 56009 GATCCGGCCGAGACA CCTCCAGGCCTCGACC GGG GGGCCAGGCCTGGAGG ATTGTCTGTGGGGTT TERM 44 56009 - 56043 + F 90 -20 -2.75765 | opp_overlap 56009, overlap 56008 GATCCGGCCGAGACA CCTCCAGGCCTCGACC GGG GGGCCAGGCCTGGAGG ATTGTCTGTGGGGTT TERM 45 56136 - 56152 + F 95 -10.8 -4.56775 | opp_overlap 56118 56113 CAAGCTTGGCGGCGA GGCGCG CCGAC CGCGCC TTTTTCCAGCACAGT Caul_5136 56313 - 57077 + | short-chain dehydrogenase/reductase SDR TERM 46 57779 - 57810 + G 74 -13.6 -3.30474 | gap 1, overlap 57771 TCTCGATCGCTCGCG CCG-CCGCCCCGGCC CTA GCCCGGCGCGGTCGG TTGATCCTTGTCGGG Caul_5137 57415 - 58128 + | short-chain dehydrogenase/reductase SDR Caul_5138 58183 - 58692 + | hypothetical protein Caul_5139 59643 - 58741 - | LysR family transcriptional regulator TERM 47 58819 - 58772 - G 93 -8.3 -5.14563 | overlap 58780 GTCTCGACCAAAAAA TCCACGAAGGCGCGGGTGC-GCG CGGG CGCTGCGGCCGCGCCGCCA-GGA AACACCGCGTAGAAG TERM 48 58812 - 58780 - G 70 -12.6 -3.3158 | gap 1, overlap 58772 CAAAAAATCCACGAA GGCGCGGGTGC-GCG CGGG CGCTGCGGCCGCGCC GCCAGGAAACACCGC TERM 49 60167 - 60190 + G 70 -3.7 -4.46212 | opp_overlap 60167, overlap 60176 CGCCGGCCAAGGAGA GCGATCCCA GGATCA TGGGTCCGC TTTTCTACTCGGACC Caul_5140 59740 - 60822 + | hypothetical protein TERM 50 61512 - 61527 + G 77 -11.8 -3.9461 | GCTAGCCCTGGAGCG GGCGCC GTCG GGCGCC TTCTTCTTCGCCGAA Caul_5141 60874 - 61773 + | NAD-dependent epimerase/dehydratase Caul_5142 61807 - 63606 + | methyl-accepting chemotaxis sensory transducer Caul_5143 63669 - 63851 + | hypothetical protein TERM 51 64486 - 64497 + G 72 -5.8 -4.25104 | CTATGAGCGAGGCCG TCCC ATGG GGGA TTTTGGTGAAGCGGC TERM 52 64744 - 64783 + G 70 -12.1 -3.36452 | overlap 64768 GGACGGCACCATCAC GGCCGCCAGCGCC-TCTGC CAAC GCCGATGGCGC-GGCCGCC TTGCTGTTGACCCGT Caul_5144 64004 - 65206 + | acetyl-CoA acetyltransferase Caul_5145 65239 - 66252 + | luciferase family protein TERM 53 66526 - 66548 + G 70 -12.7 -3.25719 | gap 1 GCGGCTGGATCCGCG CCG-CGCCGG GCGG CCGGCGGCGG TTCATCCTCTGCTCG Caul_5146 66252 - 66734 + | hypothetical protein Caul_5147 67409 - 66768 - | metal dependent phosphohydrolase TERM 54 67799 - 67838 + G 73 -12 -3.53343 | gap 1, opp_overlap 67796 67792, overlap 67803 67807 67807 67808 GCCGAGAAGGCATGG CTGCGCC-TGGCCGCGGGC AAG GCGCGCCGCCATGGCTCGG TTTGCAGCGGCGCTT TERM 55 67807 - 67851 + G 72 -5.6 -4.46212 | opp_overlap 67796 67792, overlap 67803 67799 67807 67808 GGCATGGCTGCGCCT G-GCCGCGGGCAAGGCGCGCCG CCA TGGCTCGGTTTGCA-GCGGCGC TTTTCTGCTGGCCCA Caul_5148 67514 - 68500 + | AraC family transcriptional regulator Caul_5149 68925 - 68497 - | BadM/Rrf2 family transcriptional regulator Caul_5150 69546 - 68932 - | TetR family transcriptional regulator Caul_5151 69959 - 69663 - | hypothetical protein TERM 56 70004 - 69978 - R 100 -17.2 -4.07687 | overlap 69979 AGGTCTCCTTCAAAA GCCCCGCGCGGC CAG ACCGCGCGGGGA CGAGCGGGCTGAAAT TERM 57 70003 - 69979 - R 93 -20.7 -3.04398 | overlap 69978 GGTCTCCTTCAAAAG CCCCGCGCGGC CAG ACCGCGCGGGG ACGAGCGGGCTGAAA Caul_5152 71227 - 70019 - | NADH:flavin oxidoreductase/NADH oxidase TERM 58 71203 - 71172 - G 93 -15.8 -3.9444 | overlap 71173 GAAAGGCGAAGGAAA GCGGCGGCGCCC TTGGGGGT GGGCGCCGCCGT CGAAGCGGTGGGCCG TERM 59 71202 - 71173 - G 82 -19.3 -2.95941 | overlap 71172 AAAGGCGAAGGAAAG CGGCGGCGCCC TTGGGGGT GGGCGCCGCCG TCGAAGCGGTGGGCC Caul_5153 71982 - 71251 - | short-chain dehydrogenase/reductase SDR TERM 60 71593 - 71620 + g 72 -9 -4.09685 | CTTGACGATGATCGA GGCGCCGTCGCT GAGC AGCGGCAGGGCC TTTTGCACGCTAAAC TERM 61 72068 - 72041 - R 100 -25.6 -3.64259 | overlap 72016 AATGACGGGGAAGAA CGGCGCCGGCCC GCAT GGGCCGGCGCCG CGGCGGACTACTGGC Caul_5154 72729 - 72076 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Caul_5155 72843 - 73739 + | LysR family transcriptional regulator Caul_5156 74091 - 73747 - | hypothetical protein Caul_5157 74194 - 74505 + | hypothetical protein Caul_5158 74502 - 74945 + | hypothetical protein Caul_5159 75919 - 74963 - | P-type conjugative transfer ATPase TrbB TERM 62 75625 - 75591 - G 75 -5.5 -4.65895 | opp_overlap 75619, overlap 75594 75619 TTCCGGATCGAAAAA CACGGCGCGGCGGCG ACTGG CGGCAACACGCCTTG AAAGCGTTCTCCGCT Caul_5160 77838 - 75922 - | TRAG family protein Caul_5161 77945 - 78343 + | hypothetical protein Caul_5162 79853 - 78357 - | MobA/MobL protein Caul_5163 80121 - 80678 + | hypothetical protein TERM 63 80685 - 80670 - T 100 -11.8 -5.00884 | opp_overlap 80670 ACGCGGCGCAAAAAA GGGGGC TGAC GCCCCC TTCCCTACCCGCACG Caul_5164 81022 - 80690 - | hypothetical protein TERM 64 81416 - 81401 - R 100 -11.8 -5.06451 | CACCAGCGCAAAAAA GGGGCC CGAA GGCCCC TGCGTCAGCGGCGGA Caul_5165 81642 - 81421 - | hypothetical protein TERM 65 81989 - 81959 - R 86 -16.1 -3.14344 | gap 1, opp_overlap 81962 CAGCTTCCCCAGTAA GGCCGCCGCGCGCC GGCA GGCCCGCGG-GGCC GCCCGGCCCAGGACA Caul_5166 82813 - 82061 - | cell wall hydrolase SleB Caul_5167 83340 - 82810 - | putative conjugal transfer protein TERM 66 83296 - 83259 - G 90 -9.7 -4.71426 | gap 1 TGTTGATCAACAAAA GCGGCTCGGGGCGCGCGA TTG CCGCG-GCCGCCAGCGGC GCGGGGGTCAGGGCC TERM 67 83439 - 83490 + r 75 -11.6 -3.60098 | gap 1, opp_overlap 83455, overlap 83412 83410 83408 83440 83452 CGGGTCCGCGTTTGC TGGAGCCGGGGGAA-CAGGGCCA TCTCTTC TGGCCCTGGTTTTCCCGGCGGCG TTTCAGCTGCGCCGT Caul_5168 85158 - 84190 - | plasmid replication initiator protein-like protein TERM 68 84998 - 85010 + g 72 -4.7 -4.4767 | overlap 84999 ACCTTCACCGAGACC TCGCC GTC GGCGC TTTTGTACTCGATGG Caul_5169 85723 - 85244 - | hypothetical protein TERM 69 85518 - 85541 + g 100 -16 -4.07568 | gap 1 ACCGGCGGCGCGGCG GCC-GCCGCGC GGG GCGCGGCCGGC TTTTCAGCGGCGGGC TERM 70 85631 - 85670 + g 74 -16.4 -2.71364 | opp_overlap 85630 CTTGGCGCGATCAAC CGGCTTGGGCTTGGGCGC GAAC GCGTCCAGGTCCAGCCCG TCGTTGAGCCCGTCG TERM 71 85678 - 85697 + g 77 -3.4 -4.67904 | overlap 85679 85688 CCAGCCCGTCGTTGA GCCCGTCG AAGC CGAAGGGG TTTTTGGCCTTGGTC Caul_5170 86505 - 85723 - | ParA protein, putative TERM 72 86318 - 86289 - G 73 -12.1 -3.53012 | CGGCGTTGCGGGAAA TCATGTCGGCGGC CTCG GCGGCCGACTTGA CGCGCGAACGCGAGG TERM 73 87202 - 87177 - R 100 -23.3 -3.5936 | CTCAAAGGCGCGAAA CCCGCCCCGGC GGTG GCCGGGGCGGG CGTCTCAGGCGTCAG Caul_5171 87579 - 87214 - | single-strand binding protein TERM 74 88353 - 88318 - R 100 -15.4 -4.72272 | gap 1, overlap 88324 GTTCCGCAGCAAAAA GACAATCGGCGGCGAGC AGG GC-CGCCGCCGTTCGCC GCTAGCCGCGAAGCC TERM 75 88347 - 88324 - R 84 -16 -3.05531 | gap 1, overlap 88318 CAGCAAAAAGACAAT CGGCGGCGAGC AGG GC-CGCCGCCG TTCGCCGCTAGCCGC Caul_5172 89287 - 88355 - | hypothetical protein Caul_5173 90033 - 89467 - | GcrA cell cycle regulator Caul_5174 90401 - 91333 + | HEPN domain-containing protein Caul_5175 91330 - 92229 + | exonuclease RNase T and DNA polymerase III Caul_5176 92353 - 92958 + | hypothetical protein TERM 76 93050 - 93018 - f 88 -16.1 -3.28791 | overlap 93020 ACCCGCCTGGGACAA GACCCGGCCGTCCCG AGG CGGGGCGGGCGGGGC TTGGGGCGGCCCGCC TERM 77 93048 - 93020 - f 89 -17.3 -3.21276 | overlap 93018 CCGCCTGGGACAAGA CCCGGCCGTCCCG AGG CGGGGCGGGCGGG GCTTGGGGCGGCCCG Caul_5177 93104 - 93688 + | hypothetical protein Caul_5178 93765 - 94343 + | hypothetical protein TERM 78 94995 - 95041 + G 79 -10.9 -4.03413 | gap 3 GCTGGAGCTTCTCGA GCCGG--CGCCGCG-CGAGCGC TCGGAC GCGTTCGGCGCGGCCATCCGGC TTTATGTGGAAAACT TERM 79 95201 - 95166 - g 100 -13.2 -4.59773 | gap 1, overlap 95168 CGCGATCCTCAAAAA GCGCCGCGCGGCCGCCG CCG CGACGGCCAGG-GACGC GCCGCCCGCGCATAA Caul_5179 94375 - 95295 + | hypothetical protein Caul_5180 95873 - 95319 - | hypothetical protein Caul_5181 96631 - 95936 - | hypothetical protein TERM 80 96502 - 96473 - G 74 -13.5 -3.32844 | overlap 96474 CTGGGGACTGGAGAA CGCGCGCAGGGTC GCCG GACCCTGCTCGCC CGGCCAGGGCAGGCA TERM 81 96501 - 96474 - G 77 -17 -2.59564 | overlap 96473 TGGGGACTGGAGAAC GCGCGCAGGGTC GCCG GACCCTGCTCGC CCGGCCAGGGCAGGC TERM 82 96548 - 96571 + g 70 -12.4 -3.27022 | overlap 96549 GCCCTCCAGCCACGC CCCGATCGCC TCCA GGCGATCGGC TTGGTCTCCGGTCGC TERM 83 96549 - 96570 + g 73 -15.9 -2.55999 | overlap 96548 CCCTCCAGCCACGCC CCGATCGCC TCCA GGCGATCGG CTTGGTCTCCGGTCG Caul_5182 97598 - 97320 - | histone family protein DNA-binding protein Caul_5183 98025 - 97705 - | hypothetical protein Caul_5184 102014 - 98022 - | XRE family transcriptional regulator TERM 84 98648 - 98595 - G 73 -12.4 -3.53012 | gap 2, opp_overlap 98576 98631 GTTTGCCGGGCGAAA GCCGCGTTCCTCGGCCGCGGCGGCCC GCTC GACCCGCCGCCG--GAAGAACTCGGC GGTTTCGAACGGAAA TERM 85 99467 - 99436 - G 79 -11.4 -4.07568 | GGCCCGCTGGGAAAA GCGGCCAGGACCTC GCGG GCGGCCTCGGCCGC GCCGTTGCGGCCATG TERM 86 99873 - 99912 + g 70 -12 -3.28712 | gap 1 GCGACCGTCCCACTG GGTCTCGTCGC-GGGCCAG CCG CAGGCCCAGCGCCAAGGCC TTCTGCGAGAAGACC TERM 87 101113 - 101088 - G 79 -5.4 -4.72272 | gap 1, overlap 101089 101090 TGTGCCGAGCAAAAA CCGCACGCG TGTCCGGGG CGCG-GCGG CGCCCGCGCGCTCGG TERM 88 101489 - 101447 - G 95 -24.9 -2.62184 | gap 1 CCTTGTCCCACAGCA CCCAGCCC-GCCGCCGCGAC CGCG GCCGCGGCGGCGGGGCTGGC GGTTCGGCTCAAGGC Caul_5185 102103 - 103017 + | restriction endonuclease Caul_5186 104690 - 103014 - | hypothetical protein TERM 89 103989 - 104007 + g 71 -10.2 -3.73068 | CACAGCCTGGCGATT GGGCTTGC CGG GCACGCCC TTCTTGCCTTCGCGG Caul_5187 105081 - 105632 + | ECF subfamily RNA polymerase sigma-24 factor Caul_5188 105649 - 106596 + | putative FecR TERM 90 106597 - 106619 + F 95 -12.7 -4.27192 | gap 1 CGCGTCACCACCTGA CG-CGCGCCC CGCC GGGCGCGACG TTTTCGTGAAAGTTT TERM 91 106679 - 106697 + F 72 -11.7 -3.27525 | opp_overlap 106681, overlap 106672 GAGGCCCCCCGAACG GACCGCG AAAGG CGCGGTC TTCGGTTTAGGGGGC TERM 92 107556 - 107528 - g 71 -10.9 -3.53811 | opp_overlap 107554, overlap 107529 107546 TCGACGGCCTTGAAA CCCGTCTGCGCTA CAC CAGCGCCGACGGC GACGCTCGCGAGGCC TERM 93 109627 - 109611 - g 73 -7.9 -4.12188 | CTATGACGGCGAAAA GGCCGAC CCC ACCGGCC GCCGCATCGGCCTCG Caul_5189 106717 - 109662 + | TonB-dependent receptor Caul_5190 109659 - 111701 + | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein Caul_5191 113392 - 111653 - | asparagine synthase Caul_5192 114051 - 113392 - | hypothetical protein TERM 94 114285 - 114257 - R 95 -18.2 -3.53091 | opp_overlap 114251, overlap 114258 AGTGGCGGGGTGAAA CGTGGAGGCGCG ACGGG CGCGCCTCCACA AAAGGCTAGTCTTCC TERM 95 114284 - 114258 - R 90 -19.5 -2.71712 | opp_overlap 114251, overlap 114257 GTGGCGGGGTGAAAC GTGGAGGCGCG ACGGG CGCGCCTCCAC AAAAGGCTAGTCTTC Caul_5193 114425 - 114291 - | hypothetical protein Caul_5194 114641 - 114507 - | hypothetical protein Caul_5195 115507 - 114752 - | GntR family transcriptional regulator Caul_5196 115769 - 115539 - | hypothetical protein Caul_5197 115820 - 116188 + | hypothetical protein Caul_5198 116453 - 116229 - | hypothetical protein TERM 96 116583 - 116627 + H 74 -10 -3.77196 | gap 1, overlap 116584 GGCTCAGACGCTGCC TATCCGGGGAGGGT-GAAGCG ACGT CGCTTCTGCCCTTCCTGGGCG TTTCCTCCCTAATGA TERM 97 116641 - 116671 + H 100 -10.4 -5.00884 | gap 1, opp_overlap 116643, overlap 116645 CGTTTCCTCCCTAAT GACTGGCCCGGCC CGCAAA GGCCGGGCCT-TC TTTTTTGGCGCGGAT TERM 98 116645 - 116668 + H 100 -16.7 -4.61482 | opp_overlap 116643, overlap 116641 TCCTCCCTAATGACT GGCCCGGCC CGCAAA GGCCGGGCC TTCTTTTTTGGCGCG Caul_5199 116769 - 117308 + | redoxin domain-containing protein Caul_5200 117902 - 117312 - | 2OG-Fe(II) oxygenase Caul_5201 121077 - 117916 - | DNA polymerase III, alpha subunit TERM 99 118573 - 118536 - G 91 -20.7 -3.29144 | gap 1, overlap 118507 CCAGCCGGCCCAGAA CG-CCAGGTTTGGCGCCG GAC CGGCGCCAAACCTCGTCG ATCGAACGATAGGGC TERM 100 120806 - 120789 - G 70 -9.1 -3.90586 | gap 1, overlap 120780 AGAGCAGGCGACAAA GC-CGGCC GTA GGCCGCGC GATCGGTGGGAAGGA TERM 101 121029 - 121019 - G 82 -6.8 -4.68593 | overlap 121021 CGCAGCAGCGAAAAA TGCG AAG CGCA CTGCAGTTCGACGTA Caul_5202 122498 - 121074 - | hypothetical protein TERM 102 121374 - 121356 - G 82 -3.7 -5.00616 | overlap 121358 GGGGCGGGCAAAAAA CCGGTCG GGCCG CGGCCAG TCCATCGGCCAGGAA TERM 103 122417 - 122454 + g 82 -16.9 -3.2614 | TGGCGTGAGCGACGG CCTGGCCGACCCGCAGG CCCG CCTGGGCGGCGGCCAGG TTCATGTGCGCGATG Caul_5203 123285 - 122512 - | hypothetical protein TERM 104 123531 - 123486 - H 86 -16.1 -3.20207 | AAGATCACCGATGAA CGCCCAGCCGATCGCTCGC ATTGGCTA GCGGGGGACCGGCTAGGCG CCGTCGCGGCCTGCC Caul_5204 123576 - 124349 + | hypothetical protein Caul_5205 125017 - 124346 - | DNA repair protein RadC Caul_5206 129427 - 125183 - | putative methylase/helicase TERM 105 127715 - 127702 - G 71 -2.4 -4.56597 | GGGCTTCGTCAAAAA CGAT CACCCC ATCG AAATCCGCCCCCAGC TERM 106 129031 - 128981 - G 77 -14.7 -3.17219 | GAGAACCGCCAGCAA GCCC-GTCCCGGCCGAGGGCTCAAG CAC CTTGT-CGCTCGGCCGGATCTGGGC GGCGAGGACGGCCAG TERM 107 129576 - 129554 - R 78 -14.8 -3.01791 | ACCTGCGCGCCAAGA GCCCCCGCCC GGA AGGCGAGGGC TCCCAGAGGAACTGG Caul_5207 131699 - 129597 - | hypothetical protein TERM 108 130145 - 130177 + g 84 -16.9 -3.53091 | opp_overlap 130139 130135 TGAAAGCGATCGGTC GCTGGCCCGAGGCCT TGT AGGCCGCGCGCCGGC TTTCGAGGCGCGCGT TERM 109 131106 - 131090 - G 72 -9.3 -4.08767 | opp_overlap 131090 GGTAGTCCTGCAAAA GGCCGTC GAG GGCGGCC TGGGCCAGCTCGTCC TERM 110 131875 - 131835 - H 74 -12 -3.53012 | gap 1 CCCGGGTGGGGCAAA TCGGCAACATTC-CACCCG GCAT CGCGCGCGAATGTTACCGA TCGGTCTCGCAAATC TERM 111 132519 - 132559 + G 84 -19.9 -2.83343 | overlap 132483 GCCGCCGTCGGCCTG GCGG-CTTGCGCCGCGGTC TTTGT GAC-GCGGCGCAAGCCCGC TCTAGTCCTGGCTGT Caul_5208 131934 - 132659 + | SNARE associated Golgi protein Caul_5209 133579 - 132683 - | virulence-associated protein E TERM 112 132914 - 132903 - G 76 -7.2 -4.31433 | overlap 132904 GACGTCGACAACAAA GCCC AGGC GGGC AGGGCGAAGCGCGCT TERM 113 133289 - 133310 + g 88 -12.9 -4.27316 | overlap 133290 CCCCTCGCCCCACAG CCGGCGCGC GACC GCGCGCCGC TTTTCGATTCCGGCG TERM 114 133290 - 133309 + g 80 -16.4 -3.16068 | overlap 133289 CCCTCGCCCCACAGC CGGCGCGC GACC GCGCGCCG CTTTTCGATTCCGGC Caul_5210 134696 - 133710 - | hypothetical protein Caul_5211 135955 - 134696 - | KAP P-loop domain-containing protein TERM 115 134787 - 134838 + g 72 -8.5 -4.05788 | opp_overlap 134777 AGCAAGGCGTCCAGC CGGGCGCGGAGG-GCGGCGGACACC GCAG GGTCGCGGCCGCGCCGCCG-GCCAG TTTCCTTTACGGCGA TERM 116 135340 - 135322 - G 76 -3 -4.7629 | overlap 135324 GCACCAAGCGAAAAA CCTCCCGA GCC TCGGCACG TTCCAGGCGATCGAC Caul_5212 137269 - 136028 - | replication protein C TERM 117 137314 - 137327 + r 93 -9.5 -4.74103 | opp_overlap 137305 CACACAGGTTCCCGT CGCGC GAAC GCGCG TTTTTGGATTGCAGC TERM 118 137424 - 137447 + r 100 -11.6 -4.9792 | opp_overlap 137415 137424 137423 GAATGACCTGGAAAG CCCGGCGCGT TTCG GCGAGCCGGG TTTTTCTATGCGCTC Caul_5213 137764 - 137453 - | hypothetical protein TERM 119 137756 - 137735 - G 76 -7.2 -4.32951 | overlap 137736 ACCCGAACTAATAAA GGTGAGCC GGGCCA GGCTCGCC TCGCGCAATAAAGCT Caul_5214 139046 - 137820 - | conjugation TrbI family protein Caul_5215 140110 - 139043 - | P-type conjugative transfer protein TrbG TERM 120 139978 - 139962 - G 70 -9.3 -3.91897 | GGCCGGACCGACAAA GCCGGGG GAG CCGCGGC CGGACCTTGCACCTC Caul_5216 140793 - 140107 - | conjugal transfer protein Caul_5217 142086 - 140806 - | P-type conjugative transfer protein TrbL TERM 121 141012 - 140998 - G 70 -3.5 -4.46212 | gap 1 GGGCGGAGGAGAAAA CGACGC CTTG GCG-CG GGAGACGACATCGGA Caul_5218 142312 - 142097 - | hypothetical protein Caul_5219 143025 - 142312 - | putative conjugal transfer protein TrbJ TERM 122 142728 - 142759 + g 82 -18 -3.01924 | opp_overlap 142749, overlap 142750 CGAACCCTTCGGTGA TGCTCGTGGCCTGG TAAC CCAGGCCACGGGCC TGTTGCAGGAGGCTG Caul_5220 143291 - 143025 - | hypothetical protein Caul_5221 145758 - 143299 - | CagE TrbE VirB component of type IV transporter system TERM 123 144258 - 144283 + g 70 -12.5 -3.30441 | opp_overlap 144241 144242 CGCCCCCCACCAGGA GGGTCGCGGCG CGAC TGCTGCGGCCC TTATCGAAGATGATG TERM 124 145443 - 145421 - G 77 -17 -2.52464 | overlap 145405 CGGGTCTCGAAGTGA GCGGCCTCCG CCT CGAAGGCCGC GCGACGCTCCTCGTC Caul_5222 146025 - 145762 - | conjugal transfer protein Caul_5223 146372 - 146025 - | conjugal transfer protein TrbC TERM 125 146206 - 146154 - G 78 -14.3 -3.63627 | gap 3 CTCGGAGATCGCAAA GCCCAGACCGGTCAAGGCGAT-GGCG ATGA CGCCGATCGCCTTGGCCA-CC-GGGC CGGTGATGGAGTCGG TERM 126 146507 - 146561 + r 83 -12.8 -3.87373 | gap 2, overlap 146508 AAGCTTGATGGCCCC GGCTGCTGGCCC-CGCCGC-GCGGAG CCCTA CTCCGCAGCGGCGCGGGCCAATGGGA TTTCTCCACGCTGTA TERM 127 146508 - 146560 + r 83 -16.3 -2.92102 | gap 2, overlap 146507 AGCTTGATGGCCCCG GCTGCTGGCCC-CGCCGC-GCGGAG CCCTA CTCCGCAGCGGCGCGGGCCAATGGG ATTTCTCCACGCTGT Caul_5224 146757 - 146533 - | LuxR family transcriptional regulator Caul_5225 147486 - 147064 - | XRE family transcriptional regulator Caul_5226 150191 - 147630 - | hypothetical protein TERM 128 148790 - 148824 + g 74 -12.8 -3.61398 | opp_overlap 148813, overlap 148791 GGTCGTCAGCGCCGA ACGCCGCGCCGATG GGCGCAA CATCGGCGCGGCCA TTCTTCAGCCGCGGC TERM 129 148791 - 148823 + g 74 -16.3 -2.76696 | opp_overlap 148813, overlap 148790 GTCGTCAGCGCCGAA CGCCGCGCCGATG GGCGCAA CATCGGCGCGGCC ATTCTTCAGCCGCGG Caul_5227 151045 - 150191 - | hypothetical protein Caul_5228 152586 - 151048 - | hypothetical protein Caul_5229 153998 - 152742 - | AAA ATPase Caul_5230 158029 - 154022 - | hypothetical protein TERM 130 155344 - 155326 - G 79 -11.7 -4.07568 | GGGCCGTGTCCAAAA GCGCCTC GACCT GAGGCGC GCCGAACTTTTCCTC TERM 131 157606 - 157637 + g 75 -15.8 -2.83964 | overlap 157603 157601 TCTGACGCGTCAGCG GCGTCAGCCGCAGC TCCA GCGGCGGCTGACGG TAATCTTCTGTGATA Caul_5231 158225 - 159319 + | hypothetical protein Caul_5232 162869 - 159348 - | hypothetical protein TERM 132 159671 - 159657 - G 73 -7.8 -4.19735 | CTTTTGAAAATGAAA CGCCAG GTC CTGACG GCCGGTCTGCGTATC Caul_5233 167198 - 162873 - | hypothetical protein TERM 133 163472 - 163442 - G 86 -12.4 -4.19238 | CCCGCAACTCCAAAA CGGCCGCACTGGGC GTC GCCCAGAGCGGAAG CCACGGCACGTCATC TERM 134 164316 - 164303 - G 73 -9.5 -3.84451 | opp_overlap 164303 164300 GTCCCCAAAGCGAAA GGCGC AGGC GCGCC TCGTTGATCACGCTG TERM 135 164436 - 164414 - G 71 -11.2 -3.55444 | GGTCGAGTTCGGAAA GCGCGAGGGC GTC ACCCTCGAGC CCGCGTGTCAAATGG TERM 136 165763 - 165789 + g 70 -15.2 -2.75535 | opp_overlap 165763, overlap 165754 165753 ACGTCGCTGAATGGA CCGGCTTGGC GCTTTCG GCCAAGCCGG TGCTTCCAATCTTCG TERM 137 166807 - 166821 + g 84 -7 -4.731 | opp_overlap 166787 ATGCCTAGGTCTTCG CCGGCG CGC CGCAGG TTTTGTTGGTCAGTT TERM 138 167150 - 167178 + g 71 -2.4 -4.57353 | gap 1 GGACGTTGACGGCCA GATCGAGA-GGCG AGGG CGCGGTCTTGGTC TTTTCTGTGCTAACA Caul_5234 167288 - 168007 + | hypothetical protein Caul_5235 168867 - 168034 - | hypothetical protein Caul_5236 169132 - 169491 + | XRE family transcriptional regulator Caul_5237 169488 - 169781 + | hypothetical protein Caul_5238 169953 - 171251 + | integrase catalytic region Caul_5239 171330 - 171806 + | hypothetical protein TERM 139 172272 - 172257 - g 91 -4.6 -5.42259 | TCACGCTCAAAAAAA GTCGGC GCAC GCGGAC GAACAGAACCGTCCC Caul_5240 171911 - 172297 + | ISSpo6, transposase orf A TERM 140 172658 - 172622 - g 72 -6.6 -4.36914 | gap 2, opp_overlap 172622 172652 TGGCCGCCCACAAAA GCGCCG-CCG-CCCGA ACCGCCA TCGAGACAGCCGGCGC TCGGTTGCTGTTCCT Caul_5241 172351 - 172857 + | putative transposase of insertion sequence Caul_5242 173623 - 174288 + | hypothetical protein Caul_5243 174803 - 175678 + | putative esterase Caul_5244 175668 - 176603 + | tryptophan 23-dioxygenase Caul_5245 176608 - 177843 + | kynureninase Caul_5246 177923 - 180211 + | TonB-dependent receptor TERM 141 180234 - 180257 + T 100 -15.3 -4.67982 | CTTCGATCCACTTTG GGCGGTCGC ATTCCA GCGACCGCC TTTTCTTGCGTGGGG Caul_5247 180933 - 180283 - | hypothetical protein Caul_5248 181871 - 180936 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 142 181876 - 181933 + r 71 -14.1 -2.52464 | gap 1, opp_overlap 181919 CGATAGATCATGACT GT-TCTCCGACGCCGTTTTCAGGCGCCG CGC CGGCGCGCGAAGACGGCTGCGCAGAGAC TAACTTGCGCGGAAA Caul_5249 182539 - 182039 - | AsnC family transcriptional regulator TERM 143 182573 - 182585 + H 74 -9.1 -3.88001 | opp_overlap 182559 ACCTCGGCGACGTTT TCCGC CGC GCGGA TTGGTTTTTCTCCAC TERM 144 182654 - 182620 - H 73 -6.5 -4.34402 | gap 1, overlap 182622 CCCCGCAGAGGAAAA TCTGTC-CAGCCCAGC GAAG GATGGGCTACGACAAA AGCCAGATCGTCCAC Caul_5250 182741 - 183862 + | cupin 2 domain-containing protein Caul_5251 183881 - 184792 + | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase TERM 145 184896 - 184939 + G 85 -10.9 -4.33274 | gap 2, overlap 184871 184907 GGCGCTGCATAGCGC CGGCCCCACCTTGCTGGCGGC CTAC GCCGCCAGC--GGCCTGGCCG TTTTCATGATCTGCC TERM 146 185108 - 185121 + G 71 -2.3 -4.58773 | opp_overlap 185099, overlap 185100 185077 AGATCACCGCCGCCG GCGTG TTCA TGCGC TTTTGGTTTCCTGAC TERM 147 185959 - 186000 + G 83 -12.9 -4.00038 | gap 1 GCGCCCGGCGCCTTC GCCATGCCGGGCGGCG-TCG GGG CGAACGTCGCCACGCTTGGC TTTCTGGTGCTCGTG Caul_5252 184789 - 186120 + | amino acid permease-associated region Caul_5253 187006 - 186446 - | hypothetical protein TERM 148 187125 - 187113 - R 91 -3.3 -5.52096 | AAATGGAATAAAAAA GGCGT CAG ACCCC GTAAGGCGTCGCTTT Caul_5254 189263 - 187524 - | integral membrane sensor hybrid histidine kinase TERM 149 187907 - 187944 + g 74 -15.5 -3.02144 | CGACGAGGATTTCAA GGCCGGCCAGCGTGATG GCGC CGTCCCGCTGCTCGGCC TCTTGAACAGCCTCG Caul_5255 189449 - 189739 + | neutral trehalase-like protein TERM 150 189963 - 189928 - T 71 -11.1 -3.53012 | overlap 189929 CTCTGGCCGTCCAAA TCCGGCATGCCGAAC GGTCTT GTCTGGCATGCCGGG CCAGGCGGAGCACCG TERM 151 189962 - 189929 - T 75 -14.6 -2.71712 | overlap 189928 TCTGGCCGTCCAAAT CCGGCATGCCGAAC GGTCTT GTCTGGCATGCCGG GCCAGGCGGAGCACC Caul_5256 192185 - 189990 - | TonB-dependent receptor Caul_5257 192986 - 192345 - | DSBA oxidoreductase Caul_5258 193726 - 192983 - | short-chain dehydrogenase/reductase SDR Caul_5259 194741 - 193752 - | 2-nitropropane dioxygenase NPD Caul_5260 194866 - 195360 + | MarR family transcriptional regulator TERM 152 195342 - 195397 + T 74 -10.3 -3.81022 | gap 2, opp_overlap 195381 GGCCTGCGACCGGAC GGCCCGGCCGGT-CGGCT-GACCCTCA GCCC TGGGGAACCAGCCGCGCCCGCAGGGCC TTCTTGTCGACCTTT Caul_5261 197010 - 195364 - | AMP-dependent synthetase and ligase TERM 153 195945 - 195983 + g 84 -16 -3.52896 | gap 1 CGACATCATGGTCCT GCCCCTGCGGCGGGAGC GGGTTG GC-CGTGCCGCAGGGGC TTGTCTCGGTCATCC TERM 154 196066 - 196052 - G 73 -7 -4.1552 | TACTCGGTCAACAAA GCCCGC GGC GCGGCC GAGCCGGCTACCAAG TERM 155 196112 - 196102 - G 72 -8.2 -4.09685 | opp_overlap 196102 196097 GCGCAGGGTCGAAAA CCGG GCG CCGG TGTCCTTCATATGCT Caul_5262 198838 - 197066 - | acyl-CoA dehydrogenase domain-containing protein Caul_5263 200152 - 199307 - | hypothetical protein TERM 156 200107 - 200050 - G 100 -12.2 -5.0133 | gap 3, opp_overlap 200055, overlap 200052 200055 CATCCCGCCAAAAAA GACTAGCTAGGCCCATGCGGTAGGGCGGA CGT TCCGCCCTACCGCATGGAG--ACCC-GTC AAAGCTCTCGTTGCA TERM 157 200109 - 200052 - G 100 -18.5 -4.13561 | gap 1, opp_overlap 200055, overlap 200050 200055 TCCCGCCAAAAAAGA CTAGCTAGGC-CCATGCGGTAGGGCGGA CGT TCCGCCCTACCGCATGGAGACCCGTCAA AGCTCTCGTTGCATG TERM 158 200106 - 200055 - G 87 -20.2 -3.08977 | gap 1, opp_overlap 200055, overlap 200050 200052 CGCCAAAAAAGACTA GCTAGGC-CCATGCGGTAGGGCGGA CGT TCCGCCCTACCGCATGGAGACCCGT CAAAGCTCTCGTTGC Caul_5264 200164 - 200772 + | hypothetical protein TERM 159 200757 - 200787 + F 88 -17.6 -3.04144 | overlap 200754 GCGCCCCCTGCTCCA GCGGATCGCGGGTT GAT GGCTCGCGATCCGC TCTTGAGCCTGACAA TERM 160 201194 - 201218 + G 73 -7.2 -4.18983 | opp_overlap 201207, overlap 201204 201214 CGGCTGGGCTTTGGA GGTCGATG ACCAAGATC CATCGACC TTGTTGTTTGTGTAC TERM 161 201823 - 201776 - g 72 -6.4 -4.25104 | gap 3, overlap 201778 201782 CGCTCTGCAGGAAAA GATCA--ATGCGG-CGCCGTCGG CCGGT CCAGCGGCGTCCGCATAGCGATC TGCCCCACCAGGATG TERM 162 201815 - 201782 - g 74 -12.4 -3.55966 | gap 1, overlap 201778 201776 GCAGGAAAAGATCAA TGCGG-CGCCGTCGG CCGGT CCAGCGGCGTCCGCA TAGCGATCTGCCCCA Caul_5265 200772 - 201818 + | hypothetical protein TERM 163 201973 - 201995 + F 71 -12.6 -3.05384 | opp_overlap 201970 CAAAATAAGCGAGAG CCTCCGGCCG ATA CCGCCGGGGG TTGACTGGAGCGCGA TERM 164 202143 - 202128 - g 77 -3.2 -4.70659 | overlap 202129 202138 CTGCAGACCCAAAAA CCTCAG GACA CCGAGA AGATGTCGGAGCTTG Caul_5266 202050 - 202319 + | hypothetical protein Caul_5267 202307 - 203341 + | hypothetical protein Caul_5268 203949 - 203344 - | hypothetical protein TERM 165 203525 - 203509 - G 78 -5.8 -4.57569 | gap 1, opp_overlap 203508 GGACTCCGCGAAAAA CGCCAGC ACGG GC-GGCG GATCTTTCTGGTTGG TERM 166 203627 - 203637 + g 71 -2.4 -4.57073 | overlap 203606 GCGCCCAGAGCGATG GCCG CCT CGGA TTTTTGAACGACCTC TERM 167 204482 - 204522 + r 91 -16.2 -3.55563 | gap 1, opp_overlap 204482 CCCCCGCCACATGAA CTTGATCGAGCCCCGTCAC GCCA GCGACGGGGCTCG-TCACG TTTGAGCGCTCACGT TERM 168 204522 - 204482 - R 93 -18.4 -3.25823 | gap 1, opp_overlap 204482 CCCCCGCCACATGAA CTTGATCGAGCCCCGTCAC GCCA GCGACGGGGCTCG-TCACG TTTGAGCGCTCACGT Caul_5269 209936 - 204546 - | hypothetical protein TERM 169 206014 - 205991 - G 74 -15.2 -3.01712 | TCGCCCGTTGTAAGA TGGCGCGCGC CCAC GCGCGCGCCT CACCCGCGTCGGGCT TERM 170 206126 - 206114 - G 81 -7.7 -4.57073 | overlap 206117 CAGGCGCGGTAAAAA GATCG GCC CGATC CAGCTCGCGCGCCGC TERM 171 208394 - 208347 - G 77 -15.6 -3.16742 | CCCAAGCTCGATCAA GGCGCGT-CGCCGCCGCAGGGC TTGGGC GCCCT-CGGCGTCGAACCCGCC GCGCCGCCACCAATG Caul_5270 210048 - 211229 + | hypothetical protein TERM 172 211233 - 211252 + T 72 -12.1 -3.29511 | GCGACGCCGTGAGGC CGGCGGC GCCAAG GCCGCCG TTCTCAAGACGTCGC Caul_5271 211629 - 211288 - | ethyl tert-butyl ether degradation EthD TERM 173 211803 - 211825 + H 73 -8.4 -4.07568 | overlap 211810 211813 CATTCGACCTTGGCG CTCAACCCGC ACC GTGCGTTGAG TTTTCAACACAGGGG TERM 174 212029 - 211983 - g 77 -4.3 -4.72272 | gap 2, overlap 211984 211985 CTTCCCTATCAAAAA CCGCACGCCCGGCCGGATCAGTG GGT CACCCACCTGGTCGGAC--GCGG CCTGATCGTCCCGGA TERM 175 212328 - 212361 + G 71 -11.7 -3.53811 | TTCGCCTCGCCGGAG GCGCGGCGCGAAG CGCTTGAC CTTCTTGCCGCGC TTTACAAGAAGTCCA TERM 176 212663 - 212634 - g 71 -2.8 -4.56597 | gap 1, overlap 212637 CGCGCCTTCCAAAAA CAGCCCAGGCG CCTGACCTC CGCCGGGG-TG CCGGCCGCCCAGCAC Caul_5272 211959 - 212816 + | Abi family protein Caul_5273 213604 - 212822 - | 3-ketoacyl-(acyl-carrier-protein) reductase Caul_5274 214804 - 213701 - | glycosidase PH1107-related TERM 177 214777 - 214763 - G 72 -9.2 -4.07568 | overlap 214764 TTGGGGTGGCGAAAA CGGGCC GAT GGCCCA ATCTGGCACGGTCGC Caul_5275 215703 - 214810 - | ROK family protein Caul_5276 217217 - 215700 - | major facilitator transporter TERM 178 217152 - 217133 - G 70 -12.8 -3.26947 | CAAGTTTGAGACCAA GCCGCAGC TTGG GCCGCGGC GAAATCGTCTCGCCC TERM 179 218052 - 218080 + G 71 -11 -3.65351 | gap 1 CAAGAGCGTGCGCGG CCGGCTGCTGTGG GAAC CCTCAG-AGCCGG TTTCGGTCAACCTGA Caul_5277 217360 - 219627 + | TonB-dependent receptor TERM 180 220450 - 220411 - g 71 -11.3 -3.59979 | opp_overlap 220442 CTGGGCGACTTCAAA CGCGGGTTCCCCCCTAC CCTACT GCAGGCGGGCACCCGTG AGGTGCTGTTGAGCG Caul_5278 219679 - 220629 + | alpha/beta hydrolase domain-containing protein Caul_5279 220676 - 221311 + | TetR family transcriptional regulator TERM 181 221694 - 221708 + G 74 -12.8 -3.59979 | GTGCCGCGCTGGTTC GCCGCC CGG GGCGGC TTTGAGGTCGCCGAC Caul_5280 221322 - 222557 + | glycoside hydrolase family protein Caul_5281 222557 - 223783 + | beta-lactamase Caul_5282 223863 - 224588 + | hypothetical protein Caul_5283 224692 - 225540 + | aldo/keto reductase Caul_5284 225989 - 225552 - | HxlR family transcriptional regulator Caul_5285 227298 - 226057 - | hypothetical protein TERM 182 227500 - 227490 - g 72 -8.2 -3.97368 | overlap 227491 CGCGCAATTCAGAAA GGCC GGC GGCC GAGCGACTGGTCGCG Caul_5286 227471 - 228061 + | TetR family transcriptional regulator TERM 183 228114 - 228099 - T 78 -11.8 -3.72576 | TTGGTTTCGATCAAA CCGCCG CGGC CGGCGG GCCAAGGTCGAAAGC Caul_5287 229332 - 228094 - | hypothetical protein TERM 184 228813 - 228777 - G 74 -13.7 -3.28712 | gap 2 TCTTCTGCGTCAGAA GCCGGGCGCGACGCTGC TCGAT GC-GCG-CGCGCACGGC CATGGCCACCTGCGC Caul_5288 229489 - 230430 + | luciferase family protein Caul_5289 230656 - 231564 + | LysR family transcriptional regulator Caul_5290 232713 - 231571 - | aminotransferase class V TERM 185 231721 - 231678 - G 72 -5.9 -4.26076 | gap 3, opp_overlap 231707, overlap 231679 GGACGCTGACGAAAA CGCCGGCCGCGTTCAGCGGTTC GAC GAGCCGC-GC-CGCG-CGGGCG GACCCGAAACTCACG Caul_5291 233636 - 232824 - | aspartate dehydrogenase TERM 186 233066 - 233028 - G 71 -10.3 -3.72576 | gap 1, opp_overlap 233055 CTCGGTCTGATCAAA GCCAAGTCCGGCAAGCGC CACC GCGGCCGCCAGA-TTGGC GTTTCTCGGGTAAAG TERM 187 233055 - 233067 + g 70 -9.1 -3.89346 | opp_overlap 233028 AAGCGCCACCGCGGC CGCCA GAT TGGCG TTTCTCGGGTAAAGC SEQUENCE gi|167643973|ref|NC_010338.1| Caulobacter sp. K31, complete genome (length 5477872) Caul_0001 389 - 1852 + | chromosomal replication initiator protein DnaA TERM 1 1900 - 1878 - T 80 -14.8 -3.21912 | opp_overlap 1878 GTTTGAAGTGATCAA GGGCCGTCCT GAT AGGGCGGCCC TTTTTCGTTAATGCC TERM 2 1878 - 1900 + T 100 -17 -4.90266 | opp_overlap 1878 GTTTGAAGTGATCAA GGGCCGTCCT GAT AGGGCGGCCC TTTTTCGTTAATGCC Caul_0002 2654 - 2016 - | 2OG-Fe(II) oxygenase TERM 3 2972 - 2943 - g 74 -13.7 -3.31144 | gap 1, overlap 2969 CCCCGACGCCGACAA GCTGACCTTCACCG CCT CGGTGAAGATC-GC CATCGACGTGGTCAA Caul_0003 2749 - 5409 + | peptidase M1 membrane alanine aminopeptidase TERM 4 5525 - 5488 - f 74 -14.9 -2.56596 | gap 1, opp_overlap 5493, overlap 5484 TTCGCGATCAATCTA GCCCATAGGCCGCGCTCG ATC CGAGCGCGGCCTATTT-C GTCGCAGGCCACGAT TERM 5 5493 - 5521 + F 100 -24.7 -3.72576 | opp_overlap 5488 5484 GATCAATCTAGCCCA TAGGCCGCGCTCG ATC CGAGCGCGGCCTA TTTCGTCGCAGGCCA Caul_0004 5803 - 7698 + | chaperone protein DnaK TERM 6 7706 - 7734 + F 100 -19.5 -3.62046 | overlap 7692 CGGCGTGATGTCGCA GGGGGGCGCGCGC CTT GTGCGCGGCCCCC TTGTTCCCCAAATAA Caul_0005 7890 - 8351 + | hypothetical protein Caul_0006 8388 - 9536 + | chaperone protein DnaJ Caul_0007 10543 - 9533 - | putative DNA-binding protein TERM 7 11569 - 11538 - g 95 -15.2 -4.08216 | gap 1 CGATCGCGCCCAAAA TGGCGACC-GAAGCG GCT CGCTCCTGGCCGCCA TCGACCGCACCGTCA Caul_0008 10642 - 13356 + | DNA mismatch repair protein TERM 8 15146 - 15097 - g 84 -16.3 -3.40403 | gap 1 GGGCGGCCAGGAGAA GGCCGGGGCCCGCAGCGCCCGCAG CGC CTGCGAGCGCCT-GGGCGTCGACC GGCTGAAGGTCGAGC TERM 9 15871 - 15817 - g 70 -12.7 -3.28712 | gap 2, overlap 15818 CCTGGGGTGCGAGAA CCCG-CGCGTCCTGC-GCCGCCTGGCC GAC GCCCTGGAGGCGGCCGGACGCGGCGAA CCCCTGGTCATCGAG TERM 10 15991 - 15955 - g 79 -14.6 -3.35679 | overlap 15970 CGTGGTGATCGACAA CGAGGCCTCCAACGA-GG CCA CCGTCGTC-GAGGCCTCG GGCCGCGACCGTCCC Caul_0009 13433 - 16258 + | PII uridylyl-transferase Caul_0010 17726 - 17391 - | hypothetical protein TERM 11 17752 - 17716 - G 75 -9.3 -4.20106 | overlap 17717 AAACGGTATTCAAAA CTGCAAATCATCCGGGC GAG GCCCGGGCGCTTCGCAC CCTTCCCAAACTCTC TERM 12 17892 - 17857 - H 72 -14 -2.72344 | gap 1, opp_overlap 17838, overlap 17885 17888 GCGGAGCCTCAAGCA CGAGGGC-TCTTCCCCC TTT GGGGGAAGACGACCGCG AAGCGGTCCGTAGGG TERM 13 19052 - 19017 - g 71 -11.2 -3.6106 | gap 1, overlap 19009 GGCAAGACGCGCAAA GCGCCATGGACCAGG CCATCAC CCTGG-CCATGGCCC TGACCATTCCCGCCG Caul_0011 18125 - 19681 + | integral membrane protein MviN Caul_0012 20020 - 21054 + | tryptophanyl-tRNA synthetase Caul_0013 21498 - 21091 - | ferric uptake regulator family protein Caul_0014 21988 - 21545 - | ribosomal-protein-alanine acetyltransferase Caul_0015 22626 - 21985 - | peptidase M22 glycoprotease Caul_0016 23276 - 22623 - | hypothetical protein Caul_0017 23934 - 23281 - | hypothetical protein TERM 14 24049 - 24094 + r 72 -12 -3.25896 | gap 3, opp_overlap 24038 24020, overlap 24047 GAAACGCGGCGCTCA GGC-GTCGGTCCCGGATAGCGGC TGC GCCGCT-TCCGGGAT-GACAGGC TCTTCTAGATGATCC Caul_0018 24686 - 24099 - | hypothetical protein Caul_0019 25415 - 24846 - | scaffold protein Nfu/NifU TERM 15 26775 - 26797 + G 78 -9 -4.25388 | GGGCTATGAGAGCTT GCCGGTTCGG ATC CCGACGCGGC TTTGATTTTCGTCTC Caul_0020 25534 - 26802 + | cytochrome P450 Caul_0021 26966 - 28318 + | RNA modification protein Caul_0022 28315 - 29259 + | PhoH family protein Caul_0023 29260 - 29748 + | hypothetical protein TERM 16 29785 - 29825 + G 100 -22.6 -3.61715 | gap 1, opp_overlap 29779 ACGACCAGAGTTCCG CGCCCGC-CGGTCCGGCTC GATT GAGCCGGGGCGTGCGGGCG TTCTTCCGCAAGATG Caul_0024 29760 - 30674 + | CBS domain-containing protein Caul_0025 30671 - 32257 + | apolipoprotein N-acyltransferase Caul_0026 32306 - 32740 + | XRE family transcriptional regulator TERM 17 33517 - 33490 - g 73 -10.6 -3.85864 | gap 1, overlap 33493 GCACCAGCACAAGAA GAAGATCGACGGC AAG GCCG-CGACCTCC AAGCGCGTGCTCGAC TERM 18 33514 - 33493 - g 72 -8.7 -4.05004 | gap 1, overlap 33490 CCAGCACAAGAAGAA GATCGACGGC AAG GCCG-CGACC TCCAAGCGCGTGCTC TERM 19 33688 - 33712 + G 89 -18.5 -3.28791 | opp_overlap 33669 CGACACCTACGGCGG CGCGGCGCCGC ACG GCGGCGGCGCG TTCTCGGGCAAGGAT Caul_0027 32867 - 34090 + | S-adenosylmethionine synthetase TERM 20 34113 - 34148 + F 90 -19.8 -2.7464 | opp_overlap 34111 34108, overlap 34117 CCTTCCAGAACTATC GGAGCGGGCCTCGATC ATCC GATCGGGGCCCGTTTC ATTTGAGCGTCCATT TERM 21 34117 - 34144 + F 100 -19.2 -4.06502 | opp_overlap 34111 34108, overlap 34113 CCAGAACTATCGGAG CGGGCCTCGATC ATCC GATCGGGGCCCG TTTCATTTGAGCGTC Caul_0028 34182 - 34862 + | tRNA (guanine-N(7))-methyltransferase TERM 22 34871 - 34898 + T 100 -19.8 -4.11484 | opp_overlap 34871 GATCTGAACGAAAAA GGCCGGCGCCGC TTTC GCGACGCCGGCC TTTTCGAAGCTTAGA TERM 23 34898 - 34871 - T 100 -22 -4.87291 | opp_overlap 34871 GATCTGAACGAAAAA GGCCGGCGCCGC TTTC GCGACGCCGGCC TTTTCGAAGCTTAGA Caul_0029 35458 - 34925 - | inorganic diphosphatase TERM 24 35698 - 35720 + H 100 -14.1 -5.27335 | TGATAGCGCTTTCGA GCGGCGGCC CGAAA GGCTGCCGC TTTTTCTTTGGCCGC TERM 25 36287 - 36264 - g 72 -13.8 -3.22884 | overlap 36279 CGATCAACTGATGAA GCGGGGCGCT GAAC AGCGCGCCGC TCGCGTCGGCGCCGA Caul_0030 35779 - 36378 + | hypothetical protein TERM 26 37710 - 37659 - g 90 -17.2 -3.44146 | gap 1 TTCCTCGACAAGGAA GC-CGCCGCCCTCGACGCCAAGCGC GTC GAGTTGGGCGTCGAGGACGGCCTGC TCGAGATCGAAGGCG Caul_0031 36381 - 38087 + | transcription elongation factor NusA TERM 27 38097 - 38126 + F 82 -14.9 -3.34398 | opp_overlap 38114, overlap 38095 GACTGATCCTGAGCC CCGCGCCTCCTTC GAAA GTCGGAGGCGCGG TCTTTCGCGAGCCGC TERM 28 38436 - 38396 - g 73 -7.3 -4.1891 | overlap 38397 CTCGGCCAAGACAAA GCTGATCGCCCCGGCCGAC CTG GCCGACCAGGTGGAGCGGC TGCTGGCCAAGCGGG Caul_0032 38142 - 38807 + | hypothetical protein TERM 29 38896 - 38880 - f 71 -9.4 -3.68222 | opp_overlap 38880 CTGGAACTTGAACAA GGAGCG TGATC CGCTCC TGAGTTGAGGGTCGG TERM 30 40360 - 40346 - g 100 -7 -5.27023 | opp_overlap 40351, overlap 40347 40348 ACGTGAAAAAGAAAA GCGCCG CGG CGGCCC CGCCGATGTGGTCAA Caul_0033 39009 - 42146 + | translation initiation factor IF-2 TERM 31 42168 - 42205 + F 90 -19.9 -2.57132 | opp_overlap 42174, overlap 42174 TCGGAGCTTTGAAGA GACAGAGGGCGCGGGCC GCGA GGTCCGCGCCCTTTTTC CTTCTCCCGCAAGGG TERM 32 42199 - 42174 - f 88 -17.5 -3.10493 | opp_overlap 42168 42174 CTTTGAAGAGACAGA GGGCGCGGGCC GCGA GGTCCGCGCCC TTTTTCCTTCTCCCG TERM 33 42174 - 42199 + F 100 -19.7 -4.93365 | opp_overlap 42174, overlap 42168 CTTTGAAGAGACAGA GGGCGCGGGCC GCGA GGTCCGCGCCC TTTTTCCTTCTCCCG Caul_0034 42282 - 42797 + | hypothetical protein Caul_0035 42821 - 43375 + | hypothetical protein Caul_0036 43559 - 45103 + | TPR repeat-containing protein TERM 34 45143 - 45114 - f 78 -9.9 -4.08767 | gap 1 CTTAGGGGCGCAAAA GGCCCACGGCGCAA CGT CCGCGCCG-GGTCC CGTCCTGCCATCTGC Caul_0037 45328 - 46116 + | dienelactone hydrolase Caul_0038 46237 - 46731 + | ribosome-binding factor A Caul_0039 46734 - 47666 + | tRNA pseudouridine synthase B Caul_0040 47681 - 47950 + | ribosomal protein S15 TERM 35 47957 - 47997 + F 100 -20.6 -3.87994 | gap 1, overlap 47940 47938 47958 47962 47979 CGCCGCTAGTTTTGG CGCGATTTCGCCGCCCTGC TCAC GCAGGGCGGCGAAAT-GCA TTTCTAGCCCTCCGT TERM 36 47958 - 47996 + F 100 -24.1 -2.92475 | gap 1, overlap 47940 47938 47957 47962 47979 GCCGCTAGTTTTGGC GCGATTTCGCCGCCCTGC TCAC GCAGGGCGGCGAAAT-GC ATTTCTAGCCCTCCG TERM 37 47962 - 47993 + F 100 -24.6 -2.70532 | overlap 47958 47957 47979 CTAGTTTTGGCGCGA TTTCGCCGCCCTGC TCAC GCAGGGCGGCGAAA TGCATTTCTAGCCCT TERM 38 48971 - 48938 - g 71 -9.5 -3.73068 | gap 1, overlap 48939 GGCCGAAGTGAAGAA GGCCGTCGGCGCCGAC CTG GCCGACGCCTACA-CC ATCCGCGCCAAGGGC Caul_0041 48198 - 50348 + | polynucleotide phosphorylase/polyadenylase TERM 39 50410 - 50383 - T 72 -14 -2.71731 | opp_overlap 50384, overlap 50399 GTGAGGCTTCAAGCA GCGGGCGGCTCC GAAA GGGGCCGCCCGT TTTGCGTTTGGGGGT TERM 40 50384 - 50409 + T 100 -19.7 -4.35524 | opp_overlap 50383 50399 TGAGGCTTCAAGCAG CGGGCGGCTCC GAAA GGGGCCGCCCG TTTTGCGTTTGGGGG Caul_0042 51743 - 51024 - | ribonuclease T2 Caul_0043 52573 - 51941 - | lysine exporter protein LysE/YggA TERM 41 53106 - 53096 - H 73 -8.2 -4.08064 | opp_overlap 53097, overlap 53097 AAGGCTTCTGGAAAA CGCG CCA CGCG AAGCGCTCGTCTTCG TERM 42 53176 - 53140 - H 79 -9.3 -4.20106 | overlap 53141 AAACGGTACTCAAAA CTGCAAATCATCCGGGC GAG GCCCGGGCGCTTCGCAC CCTTCCCAAACGCTC TERM 43 53175 - 53141 - H 73 -12.8 -3.11341 | overlap 53140 AACGGTACTCAAAAC TGCAAATCATCCGGGC GAG GCCCGGGCGCTTCGCA CCCTTCCCAAACGCT Caul_0044 53347 - 55731 + | TonB-dependent siderophore receptor Caul_0045 55826 - 56509 + | putative hydroxylase TERM 44 58960 - 58939 - g 73 -12.3 -3.40403 | overlap 58948 GGTGGTCGAGGACAA CGCCACCAA CCGC CTGGTGGCG CGCCGCATCCTCGAG Caul_0046 56597 - 59302 + | PAS/PAC sensor hybrid histidine kinase Caul_0047 59376 - 61037 + | general substrate transporter Caul_0048 61941 - 61063 - | siroheme synthase TERM 45 62628 - 62608 - g 72 -9 -4.0127 | gap 1, overlap 62596 62609 AGATCGACAACGAAA TCGCCGCCG CCTC CGGC-GCGA CCGGCCGCGGAGGGG Caul_0049 62085 - 62651 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Caul_0050 62648 - 64834 + | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 46 64885 - 64927 + F 95 -20.1 -3.15544 | opp_overlap 64897, overlap 64887 GCGAAATTCGATGTG CATTTGACCTAACGCGCCT CGCCA AGGCGCGTTAGGTCAAGTC TTGCTGGACGTGAGG TERM 47 64887 - 64925 + F 100 -22.7 -3.14051 | opp_overlap 64897, overlap 64885 GAAATTCGATGTGCA TTTGACCTAACGCGCCT CGCCA AGGCGCGTTAGGTCAAG TCTTGCTGGACGTGA Caul_0051 64928 - 65671 + | LuxR family transcriptional regulator Caul_0052 65746 - 66093 + | hypothetical protein Caul_0053 66155 - 66373 + | hypothetical protein Caul_0054 66437 - 66868 + | hypothetical protein Caul_0055 67497 - 66892 - | hypothetical protein TERM 48 67927 - 67895 - g 78 -17.8 -2.79456 | gap 1, overlap 67892 67887 AACGGAACCCAACTA GCCCAG-CACGCCAG CGAC CTGGCGCGGCTGGGC GTGAAGCGGATCAAC Caul_0056 67526 - 68572 + | molybdenum cofactor biosynthesis protein A Caul_0057 68575 - 68814 + | molybdopterin converting factor, subunit 1 TERM 49 68842 - 68831 - g 72 -5.8 -4.2803 | CACCCTAACCGAAAA GGCT TTCG AGCC GGGCGAGATCCTGAC Caul_0058 68811 - 69251 + | molybdopterin biosynthesis MoaE protein Caul_0059 69263 - 69817 + | molybdenum cofactor biosynthesis protein B Caul_0060 69814 - 70284 + | molybdenum cofactor biosynthesis protein C Caul_0061 71303 - 70290 - | hypothetical protein TERM 50 71632 - 71676 + G 89 -19.1 -3.34715 | overlap 71622 71633 ACCTTGTCGGCGGCC CGCGCCGACCGCGGCCCCGAC TTC GTCGAGGCCGAGGCTCGCGCG TCTTTGCGCCGCCTG TERM 51 71633 - 71678 + G 74 -12.6 -3.53811 | gap 3, overlap 71622 71632 CCTTGTCGGCGGCCC G-CGC-CGA-CCGCGGCCCCGAC TTC GTCGAGGCCGAGGCTCGCGCGTC TTTGCGCCGCCTGGG Caul_0062 71398 - 72273 + | aldo/keto reductase Caul_0063 72339 - 73043 + | acylneuraminate cytidylyltransferase Caul_0064 74267 - 73155 - | alanine dehydrogenase Caul_0065 74388 - 74861 + | AsnC family transcriptional regulator Caul_0066 74945 - 75772 + | carbonic anhydrase TERM 52 77909 - 77959 + G 78 -16.1 -3.01712 | gap 2 TGAACCTGGCCACCA CCGAGGCCGGCGACACCG-C-CCAG CCG CTGGTGGCGGCGGTGACGGCCTCGG TGTTCGAGCCCGGCG Caul_0067 75991 - 81039 + | alpha-2-macroglobulin domain-containing protein TERM 53 82189 - 82142 - g 74 -16.8 -2.77899 | gap 1, overlap 82139 CGTGCGGATCAAGGA CCGCGCCGTGCGCGCCCTGGTCG GCT CGGCC-GGACGCGAGCGGCCCGG CGGCTGGATCGACCT Caul_0068 81219 - 83261 + | penicillin-binding protein 1C Caul_0069 83519 - 84340 + | flagellin domain-containing protein TERM 54 84392 - 84371 - T 73 -11.5 -3.54741 | opp_overlap 84371 GACGAGTGTCGGAAA GGGCGGGTC CTCG GATCCGCCC TTTTTCGCGTCGTCG TERM 55 84371 - 84392 + T 100 -13.7 -4.63527 | opp_overlap 84371 GACGAGTGTCGGAAA GGGCGGGTC CTCG GATCCGCCC TTTTTCGCGTCGTCG Caul_0070 85106 - 84480 - | carbonate dehydratase Caul_0071 85752 - 85099 - | maleylacetoacetate isomerase Caul_0072 86429 - 85752 - | fumarylacetoacetate (FAA) hydrolase Caul_0073 86658 - 87536 + | ABC transporter related Caul_0074 87536 - 91186 + | hypothetical protein TERM 56 91206 - 91254 + G 75 -10.3 -4.03234 | gap 1, opp_overlap 91206 CGGCGCGCCCAATGA CGCATTCAGCGACGCACTTCTC AGGCTC GACGCG-GCGGCGCTGAATGCG TTTCTGTCGAAGGCC Caul_0075 91183 - 91635 + | thioesterase superfamily protein Caul_0076 92324 - 91725 - | hypothetical protein Caul_0077 92446 - 93642 + | L-carnitine dehydratase/bile acid-inducible protein F Caul_0078 93642 - 94061 + | glutathione-dependent formaldehyde-activating GFA Caul_0079 96032 - 94113 - | signal transduction histidine kinase TERM 57 94561 - 94602 + g 74 -11.5 -3.71517 | gap 1 GGCGTCTCGACCAGG GCGTCGGCGGCGGCGTGG ATCATCG CCGTGACGCCGCTG-CGC TTGTATTCGATCTTG Caul_0080 96222 - 96608 + | hypothetical protein TERM 58 96601 - 96587 - f 71 -11.4 -3.53012 | GCTGCTGGCCGGAAA TCGCGG CGG CCGCGA CAAGTGATCTTCGAA TERM 59 96678 - 96621 - g 71 -11.8 -3.64716 | gap 2, overlap 96619 96622 TGATCTTCGAAAAGA CCCTGACGACCCTGGCGGCGGCCGCGGC GATC GCCGCGGCCGCCGCTGTGAGCGT--GGT CGCCGCCGCCTTCGC TERM 60 96677 - 96622 - g 70 -15.3 -2.78508 | gap 2, overlap 96619 96621 GATCTTCGAAAAGAC CCTGACGACCCTGGCGGCGGCCGCGGC GATC GCCGCGGCCGCCGCTGTGAGCGT--GG TCGCCGCCGCCTTCG Caul_0081 96605 - 97000 + | hypothetical protein Caul_0082 97093 - 97710 + | superoxide dismutase TERM 61 97746 - 97767 + T 100 -17.3 -4.4078 | CGTCTAGACGTTCAA CGGCGCGAC CTCG GTCGCGCCG TTTTCGTTCGAGCGG Caul_0083 98594 - 97734 - | metallophosphoesterase Caul_0084 99457 - 98591 - | diacylglycerol kinase catalytic region Caul_0085 99577 - 99918 + | 17 kDa surface antigen TERM 62 99944 - 99967 + F 100 -16 -4.07568 | opp_overlap 99944 GCCTGAAACCGGAAA GGCGGCCGAT TCGC GTCGGCCGCC TTTTGCGCGCCGCGG TERM 63 99967 - 99944 - f 90 -15.3 -3.71649 | opp_overlap 99944 GCCTGAAACCGGAAA GGCGGCCGA TTCGCG TCGGCCGCC TTTTGCGCGCCGCGG Caul_0086 100001 - 100471 + | OmpA/MotB domain-containing protein TERM 64 100539 - 100517 - f 76 -11.3 -3.73068 | gap 1, opp_overlap 100533 CTTGGAAGCGAACAA GGCGGATCCC GAGT GGG-TCCGCC TGAAGGACTTTCAGG TERM 65 100653 - 100664 + F 100 -7.2 -5.46629 | overlap 100661 CCCAACTGCGGTTCC CGCC CCTC GGCG TTTTTTTCGCCTGTT Caul_0087 100797 - 101009 + | hypothetical protein Caul_0088 101020 - 101271 + | hypothetical protein TERM 66 101301 - 101336 + T 100 -17.6 -3.55444 | opp_overlap 101308 GCTGCGTCACGTCCA CGAAAAAGGCCCCGGT GCGA ACCGGGGCCTTGATCG TTTCAGGCCTGGAGA TERM 67 101329 - 101308 - T 100 -17.3 -4.72986 | opp_overlap 101301 CACGTCCACGAAAAA GGCCCCGGT GCGA ACCGGGGCC TTGATCGTTTCAGGC Caul_0089 102160 - 101360 - | two-component response regulator TERM 68 102227 - 102196 - H 100 -7.9 -5.7946 | gap 1 TTCGGAACAAAAAAA GCCCA-CGGCGCGG TGAAG CTGCGCCGTTCGGC TATCGGTACCTAAAC Caul_0090 102405 - 102590 + | hypothetical protein Caul_0091 102593 - 103198 + | ECF subfamily RNA polymerase sigma-24 factor TERM 69 103213 - 103263 + G 86 -13.9 -3.88291 | gap 1, overlap 103214 103217 AAGTCTCTCCTCGGC CGAGGAGCCGGCGCGGTCGGATCC ATTC GGGTCCGGCTG-GCCGGCGCTCTG TTTCTCGCGCTCCTG TERM 70 103214 - 103261 + G 82 -14.9 -3.52906 | gap 2, overlap 103213 103217 AGTCTCTCCTCGGCC GAGGAGCCGGCGCGGTCGGATCC ATTC GGGTCCGGCTG-GCCGGCG-CTC TGTTTCTCGCGCTCC TERM 71 103217 - 103259 + G 87 -17.7 -3.33798 | gap 1, overlap 103214 103213 CTCTCCTCGGCCGAG GAGCCGGCGCGGTCGGATCC ATTC GGGTCCGGCTG-GCCGGCGC TCTGTTTCTCGCGCT TERM 72 103904 - 103932 + G 79 -11.6 -4.07568 | opp_overlap 103884, overlap 103930 CGACCCTGTGGTCGG GTCGCGACGCCG ACGAC CGTCGCCGCGAC TTTTCCGCCGCGCCC Caul_0092 103195 - 104907 + | signal transduction histidine kinase Caul_0093 104974 - 105108 + | entericidin EcnAB TERM 73 105179 - 105156 - f 91 -18.2 -3.16564 | opp_overlap 105156 TCGGGATTCGATCAA GCCCGCCGAT TTCG ATCGGCGGGC TTTTTCGTATCACGA TERM 74 105156 - 105179 + F 100 -18.2 -4.8048 | opp_overlap 105156 TCGGGATTCGATCAA GCCCGCCGAT TTCG ATCGGCGGGC TTTTTCGTATCACGA TERM 75 106283 - 106326 + G 75 -16.8 -2.87564 | gap 1, opp_overlap 106260 GATGATCGAGACCCT GGATCTGGGCGCGGCCCTG ACGGCCC CAGGGCCG-GTCCAGACCC TCTATCGCAAGCTGA Caul_0094 105378 - 106439 + | hypothetical protein Caul_0095 107285 - 106458 - | MCP methyltransferase, CheR-type TERM 76 106531 - 106497 - G 93 -17 -3.61398 | overlap 106498 GTCGCGGGTGAACAA TCCGGCCGGTCCGGCC GCG GGCCGGACCGCCCCGG TGATCCCGGCCAGGG TERM 77 106530 - 106498 - G 83 -20.5 -2.76696 | overlap 106497 TCGCGGGTGAACAAT CCGGCCGGTCCGGCC GCG GGCCGGACCGCCCCG GTGATCCCGGCCAGG Caul_0096 107647 - 107282 - | response regulator receiver protein Caul_0097 108427 - 107735 - | hypothetical protein Caul_0098 108507 - 108692 + | hypothetical protein TERM 78 109035 - 109082 + G 70 -15.5 -2.70932 | gap 1, overlap 109037 GGCCTGATCGATCGG GGCGTC-CCGGTGGCCGGCGCG ATCTG CGCCCCCGCCACCGGCGAGGTC TGGTTCACCAGCGGC TERM 79 109037 - 109080 + G 72 -14.5 -2.90075 | gap 1, overlap 109035 CCTGATCGATCGGGG CGTC-CCGGTGGCCGGCGCG ATCTG CGCCCCCGCCACCGGCGAGG TCTGGTTCACCAGCG Caul_0099 108693 - 109469 + | 3'(2'),5'-bisphosphate nucleotidase TERM 80 109597 - 109625 + T 78 -12.4 -3.74747 | gap 1, opp_overlap 109598, overlap 109598 GGACCAGACATGGAA ACGGCCGC-TCCC TTTA GGGAAGCGGCCGC TTTGGTGGAGCTTAG TERM 81 109624 - 109598 - T 100 -17.3 -3.74792 | opp_overlap 109597 109598 GACCAGACATGGAAA CGGCCGCTCCC TTTAG GGAAGCGGCCG CTTTGGTGGAGCTTA TERM 82 109598 - 109624 + T 79 -15.9 -2.84527 | gap 1, opp_overlap 109598, overlap 109597 GACCAGACATGGAAA CGGCCGC-TCCC TTTA GGGAAGCGGCCG CTTTGGTGGAGCTTA TERM 83 109793 - 109832 + T 86 -6.4 -5.00616 | opp_overlap 109796, overlap 109794 GAAGAGGCGCGGAAC CTATGCCGGGAGGATT TTTGGATC AACCCTCCCGGCAAAC TTTTTTCGGAAAAAA TERM 84 109794 - 109831 + T 70 -9.9 -3.60048 | opp_overlap 109796, overlap 109793 AAGAGGCGCGGAACC TATGCCGGGAGGATT TTTGGATC AACCCTCCCGGCAAA CTTTTTTCGGAAAAA TERM 85 109829 - 109796 - T 74 -14.7 -2.52676 | opp_overlap 109794 109793 GAGGCGCGGAACCTA TGCCGGGAGGATT TTTGGATC AACCCTCCCGGCA AACTTTTTTCGGAAA TERM 86 109879 - 109848 - T 81 -4.4 -5.00616 | gap 1, overlap 109850 TTTTTTCGGAAAAAA TTCGCGAC-CCTCGT TCG ACGAGTCGTCACGGA ATCTTCCCCGGGCTC Caul_0100 110375 - 109905 - | hypothetical protein Caul_0101 110491 - 111810 + | 3-phosphoshikimate 1-carboxyvinyltransferase Caul_0102 111814 - 112464 + | cytidylate kinase TERM 87 112605 - 112589 - f 71 -8.7 -3.88731 | CAACACGAGACTAAA CATCAGC ATG GCTGACG ATATGAGCTTCAACC TERM 88 112866 - 112856 - g 72 -8.2 -4.09739 | GGAACGCCTGGAAAA CGCC CTG GGCG AAGCGGTCATCAGCC Caul_0103 112596 - 114305 + | 30S ribosomal protein S1 TERM 89 114346 - 114371 + F 100 -18.3 -4.87133 | opp_overlap 114340 TTCAGAAACGGGGAG CGGCGGCCGGA GCGA TCCGGTCGCCG TTTTCTTTGCGCGCT Caul_0104 114606 - 114890 + | integration host factor, beta subunit TERM 90 115420 - 115363 - g 73 -7.7 -4.16016 | gap 3 CGACGCCGGAAGAAA GGCTGCTCACCGAGATCCGTGACCTGCT GGCCA AGCCGGCGACGG-TCACGGCG-GC-GCC CAAGGCGGCTGCTGC Caul_0105 114987 - 115472 + | large conductance mechanosensitive channel protein TERM 91 115482 - 115502 + T 85 -10.4 -4.36914 | GCCTGACCGCGTCAA GCTTCCCC CACTA GGGGAGGC TTTTCTAGACCCCCG Caul_0106 116328 - 115507 - | hypothetical protein TERM 92 116394 - 116367 - R 79 -16.4 -2.52464 | opp_overlap 116354, overlap 116375 CGGTTCGCCAACGGA TGAGGACATGCC CATG GGCATGTCCCCA AGACGTGCGCGGCCT Caul_0107 119274 - 116410 - | peptidase M16 domain-containing protein TERM 93 116872 - 116843 - G 77 -11.3 -3.86524 | ACATTGGCCGAGAAA CCGCCGATCGCCG CGCG CGGCGACAGGCTG GAGCCGGCGCCATAG Caul_0108 120999 - 119347 - | saccharopine dehydrogenase Caul_0109 121433 - 120996 - | putative thiol-disulphide oxidoreductase DCC Caul_0110 121984 - 121430 - | cyclase/dehydrase Caul_0111 124126 - 122186 - | acetyl-CoA synthetase Caul_0112 124317 - 125066 + | creatininase TERM 94 125164 - 125107 - T 81 -15.3 -3.05384 | opp_overlap 125125 125161, overlap 125083 CCCGGGCGTAGCGAA GCGCAGACCCGGGACCGACGCCTGAGC GCAT GCGTTTTCGGCGGTCCCGGATCCGCGC GCTACGCGCTTGTCC Caul_0113 125998 - 125216 - | hypothetical protein TERM 95 125524 - 125513 - G 73 -7.2 -4.11216 | CTCGTAGGTCGAAAA GCCC TTGC GGGC GGTCATCGAGCGGAA Caul_0114 126466 - 126098 - | Rieske (2Fe-2S) domain-containing protein TERM 96 126278 - 126251 - G 80 -16.3 -3.14132 | CTCGCGGGTCAGGAA CCGGCCGCTGG GTCCGG CCAGCGGCCAG CCGGCGTGCGGGCAG TERM 97 126394 - 126374 - G 78 -12.5 -3.70902 | opp_overlap 126372 GGCGCGATAGCGAAA GCCTCGCGC GCC GGGCGAGGC GATCTCGTCCAGAAG TERM 98 126489 - 126534 + r 91 -15.5 -3.86524 | gap 1, opp_overlap 126489 TCATTGACCCATAAA GGTTGTCATCCCGGCTCTTCGC CGC GCTTGGGGC-GGGATGACAACC TTTGTGGGGACGTGT TERM 99 126534 - 126489 - R 79 -11.1 -3.92869 | gap 1, opp_overlap 126489 TCATTGACCCATAAA GGTTGTCATCCCGGCTC-TTCG CCG CGCTTGGGGCGGGATGACAACC TTTGTGGGGACGTGT Caul_0115 126831 - 126550 - | YCII-related TERM 100 126720 - 126730 + g 79 -2.4 -4.93316 | CCAGCAGGGCGCCGG CCAG CTT CAGG TTTTTGCTGTTGTTC TERM 101 126958 - 126922 - R 77 -13 -3.62046 | overlap 126950 GCACGGCCTGAACAA TCGCCCTCATCCTGAG CCTGT CGAAGGACGAGGGCGA CGCGCGGCGCCTCAA Caul_0116 127965 - 126970 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase Caul_0117 129092 - 127962 - | glycoprotease family metalloendopeptidase Caul_0118 129164 - 130120 + | porphobilinogen deaminase Caul_0119 130129 - 130833 + | uroporphyrinogen III synthase HEM4 Caul_0120 130877 - 131818 + | hypothetical protein Caul_0121 131815 - 133362 + | HemY domain-containing protein Caul_0122 133988 - 134512 + | hypothetical protein Caul_0123 134539 - 136551 + | TonB-dependent receptor plug TERM 102 136556 - 136587 + T 74 -13 -3.34895 | opp_overlap 136542, overlap 136558 AGGCCTGGTGATCCC AAGCGGCTTCGTCC TCCG GGACGAGGCTGCTG TTACTTCGGGATCCC TERM 103 136558 - 136585 + T 83 -15.6 -3.24329 | opp_overlap 136542, overlap 136556 GCCTGGTGATCCCAA GCGGCTTCGTCC TCCG GGACGAGGCTGC TGTTACTTCGGGATC TERM 104 136659 - 136680 + T 100 -15.1 -4.7416 | opp_overlap 136653 CTCCCAACACCTCAT GGCCCCGCC GAAA GGCGGGGTC TTTTTCGCGTTTTAG Caul_0124 137315 - 136692 - | hypothetical protein TERM 105 137478 - 137501 + r 95 -21 -3.19175 | opp_overlap 137478 CGGCTCGAACGAAAA GGGCCCGGCG TCGC CGCCGGGCCC TTCCGTGTGTTCAGG TERM 106 137501 - 137478 - R 100 -21 -4.4078 | opp_overlap 137478 CGGCTCGAACGAAAA GGGCCCGGCG TCGC CGCCGGGCCC TTCCGTGTGTTCAGG Caul_0125 139725 - 137527 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 107 138555 - 138580 + g 72 -4.6 -4.46615 | AGTCGGCGGTCGGGT GGATCAGGGC CAGGAT GCCCTCACCC TTTTCCTTGGTCATC TERM 108 139074 - 139090 + g 74 -13.7 -3.36273 | overlap 139089 CCTTCTTGTCCCACG GGGCGAC GGC GTCGCCC TTGGTCTTGACCCAG Caul_0126 141058 - 139853 - | acetyl-CoA acetyltransferase Caul_0127 141140 - 142072 + | hypothetical protein Caul_0128 142656 - 142282 - | hypothetical protein Caul_0129 143045 - 142656 - | hypothetical protein Caul_0130 144210 - 143047 - | acyl-CoA dehydrogenase domain-containing protein Caul_0131 146003 - 144213 - | acyl-CoA dehydrogenase domain-containing protein Caul_0132 146576 - 146094 - | MerR family transcriptional regulator TERM 109 146500 - 146490 - G 72 -8.2 -4.07568 | opp_overlap 146492, overlap 146491 CTTGTCCTCGTAAAA GCGC AAC GCGC GCGGCGTGGCTTTGA Caul_0133 146748 - 147407 + | putative phage repressor Caul_0134 147637 - 147428 - | hypothetical protein Caul_0135 148769 - 147774 - | NAD-dependent epimerase/dehydratase TERM 110 148996 - 148968 - R 71 -5.2 -4.46212 | opp_overlap 148968 148969 148980, overlap 148969 GGGTTCAGTAGAAAA CCTCATCCTGAG CTTGT CGAAGGACGAGG TTTTCGGGCCGGAGC Caul_0136 149993 - 149019 - | UDP-glucose 4-epimerase TERM 111 149091 - 149112 + g 70 -12.3 -3.28712 | overlap 149076 149080 GCGCGGCGACCAGCC CAGCAGGGC GGCG GCCTTGCTG TTGTCGGCGACCAGG TERM 112 149422 - 149442 + g 75 -9.7 -4.09685 | ATCGCCAGCGGAATC GCATGAGTC TCC GGCTCGTGC TTTTCGCCGATGCGG Caul_0137 151764 - 150106 - | lysyl-tRNA synthetase Caul_0138 151893 - 152516 + | hypothetical protein TERM 113 153315 - 153279 - f 79 -9.3 -4.20106 | overlap 153280 AAACGGTACTCAAAA CTGCAAATCATCCGGGC GAG GCCCGGGCGCTTCGCAC CCTTCCCATACGCTC TERM 114 153314 - 153280 - f 73 -12.8 -3.11341 | overlap 153279 AACGGTACTCAAAAC TGCAAATCATCCGGGC GAG GCCCGGGCGCTTCGCA CCCTTCCCATACGCT TERM 115 153431 - 153444 + F 86 -6.7 -4.98531 | CCCCAATCGCGAACC TGACG CGGT CGTCA TTTTTAATTTGACCC Caul_0139 153547 - 154671 + | hypothetical protein TERM 116 154692 - 154721 + F 100 -26.5 -3.84451 | TCCGTCCGACCCTCA GCGCCCCGCCAGG GAAC CCTGGCGGGGCGC TTTGCGTTTGAGACG TERM 117 154828 - 154866 + G 72 -5.7 -4.36914 | overlap 154825 GCGACCCAGGCCCTG GCGGGCGCCCAGCCGCC GGCCA GGCCGATCGCCGCCAGC TTTTATGCCGGCAAG Caul_0140 154759 - 155292 + | Lipocalin family protein TERM 118 155394 - 155350 - f 81 -4.5 -5.07652 | gap 4, overlap 155354 TGCGTCAAAACAAAA CCTAGAGC----CCCGGCCTGAT ATA ATCAGGTCGGGACACGCTCTAGG CGCGTAAGGCCAACA TERM 119 155386 - 155354 - f 74 -14.1 -2.92168 | overlap 155350 TCAAAACAAAACCTA GAGCCCCGGCCTGAT ATA ATCAGGTCGGGACAC GCTCTAGGCGCGTAA TERM 120 155426 - 155413 - f 75 -3.7 -4.68103 | overlap 155414 GTAAGGCCAACAAAA TCGCG TTGT CGCGC TGTGGGTTTGCAGGT TERM 121 155535 - 155558 + F 76 -11 -3.73647 | AACGGCCTGAACCGG CGCTATCGGC CGGC GCTGATGGCG TTCTTCATGCGTCGC Caul_0141 155553 - 155999 + | ECF subfamily RNA polymerase sigma-24 factor TERM 122 156496 - 156462 - g 78 -17.1 -2.80935 | gap 1, opp_overlap 156457 156457 156490 AGGTCAGGTACGAGA GCGGCCGCCG-CCGGC TGTG GCTGGACAGCGGCCGC GCCAAGTTCTCGGTC TERM 123 156685 - 156655 - g 82 -15.5 -3.40403 | GGTGCTGGACGACAA GACCGGC-CGCGCCG ACA CGGC-CGTGCCGGTC AAGATCGGCGGCGCG Caul_0142 155996 - 157075 + | anti-FecI sigma factor, FecR Caul_0143 157133 - 159727 + | TonB-dependent receptor plug TERM 124 159763 - 159799 + F 84 -10.8 -4.21402 | overlap 159763 CCTGGCGACTCTCCT GCGGCGGATCGGGTTT CCATC GGACCCGATCCGCGCC TTTCTCGTTTTGAGT TERM 125 159763 - 159798 + F 76 -14.1 -3.11757 | gap 1, overlap 159763 CCTGGCGACTCTCCT GCGGCGGATCGGGTTT CCATC GGACCCGATCCGC-GC CTTTCTCGTTTTGAG Caul_0144 159878 - 161485 + | Alpha,alpha-trehalase Caul_0145 161590 - 162456 + | dienelactone hydrolase TERM 126 163525 - 163501 - g 73 -12.1 -3.42996 | GATCATGGAGGAGAA CCCCAAGGCGA CGA TCGCCCTGGTG CGCCCGTTCCTGGAC Caul_0146 162632 - 163552 + | alpha/beta hydrolase fold Caul_0147 163564 - 164037 + | hypothetical protein TERM 127 164156 - 164207 + F 71 -8.4 -3.90588 | opp_overlap 164138 164179, overlap 164158 164160 GCGCCATCCGCAAGC TTCAGCGGCGCCGCGCATATAGAC GCGT GGCTAGACGCGCGGCGCCGGCGTC TTTGATTGACCCGTC TERM 128 164158 - 164205 + F 86 -15.4 -3.54146 | opp_overlap 164138 164179, overlap 164156 164160 GCCATCCGCAAGCTT CAGCGGCGCCGCGCATATAGAC GCGT GGCTAGACGCGCGGCGCCGGCG TCTTTGATTGACCCG TERM 129 164160 - 164204 + F 81 -16.4 -2.72166 | gap 1, opp_overlap 164138 164179, overlap 164158 164156 CATCCGCAAGCTTCA GC-GGCGCCGCGCATATAGAC GCGT GGCTAGACGCGCGGCGCCGGC GTCTTTGATTGACCC Caul_0148 164271 - 165866 + | amine oxidase Caul_0149 167196 - 165940 - | ROK family protein Caul_0150 167331 - 168269 + | ROK family protein TERM 130 169073 - 169101 + F 72 -13.8 -2.69528 | gap 1, opp_overlap 169062 169067, overlap 169072 169071 GGAACACCAGCACCG CGCCCGCGCGCCG ACGG CGGCGAGCGG-CG TCCATTTAAATTTCG TERM 131 169256 - 169221 - f 74 -12.4 -3.53012 | opp_overlap 169223, overlap 169222 CGGGGGCTCTCCAAA CTCCGGCGCGACGACG TTCT CCCCGTCGCGCCGGTT TTTTGCCGCGCAATT TERM 132 169255 - 169222 - f 78 -15.9 -2.71712 | opp_overlap 169223, overlap 169221 GGGGGCTCTCCAAAC TCCGGCGCGACGACG TTCT CCCCGTCGCGCCGGT TTTTTGCCGCGCAAT TERM 133 169223 - 169254 + F 100 -17.2 -5.00616 | opp_overlap 169222 169221 GGGGCTCTCCAAACT CCGGCGCGACGACG TTCT CCCCGTCGCGCCGG TTTTTTGCCGCGCAA TERM 134 169588 - 169539 - g 85 -10.8 -4.2558 | GAGCCTTGAGGAAAA GGTCGGCCAG-ACCATCCAGGGCG ACAT CGCC-TCGATAACGCCGGCCGACC TCGAAAAGTACCCGC Caul_0152 169318 - 171798 + | glycoside hydrolase family 3 protein Caul_0153 171937 - 172410 + | ybaK/ebsC protein Caul_0154 173528 - 172554 - | MarR family transcriptional regulator TERM 135 174583 - 174553 - g 83 -15.5 -3.54459 | opp_overlap 174553 TCAAGCCTCTGGAAA CGGCG-GCGGCGATC CGC GA-CGCCGCGCGCCG TTATCGCAACTGCCT TERM 136 174553 - 174583 + G 79 -15.5 -3.30243 | opp_overlap 174553 TCAAGCCTCTGGAAA CGGCG-GCGGCGATC CGC GA-CGCCGCGCGCCG TTATCGCAACTGCCT Caul_0155 173892 - 174908 + | hypothetical protein Caul_0156 175037 - 175600 + | Ricin B lectin TERM 137 175611 - 175645 + T 93 -16.5 -3.75629 | overlap 175613 AGTAGGGCGCCTCGA TTCCGCTCATCCCGA GAAGA TCGGGATGAGCGGTG TTTGAGTTAGACGTC TERM 138 175613 - 175643 + T 100 -21.3 -3.46068 | overlap 175611 TAGGGCGCCTCGATT CCGCTCATCCCGA GAAGA TCGGGATGAGCGG TGTTTGAGTTAGACG Caul_0157 178144 - 175652 - | DNA gyrase subunit B TERM 139 177187 - 177203 + g 78 -12.3 -3.71848 | AAAGGTGCGTGCCGC CATCCCG CTG CGGGATG TTGTTGGTGAAGCAC Caul_0158 179319 - 178141 - | recombination protein F TERM 140 178279 - 178289 + g 75 -8.2 -4.13945 | GATTTCGTCGGCCAG GGCG GCT CGCC TTTTCAGGTCGAGGT TERM 141 178909 - 178873 - G 74 -12.1 -3.61715 | overlap 178860 178903 178905 CAGGCGGTCGAAGAA CCGGCGGCGCTCGGAGG CGG CCTCCAGGAACAGCCGG TCCTGGGCCGGGGTT Caul_0159 180280 - 179531 - | short-chain dehydrogenase/reductase SDR Caul_0160 180734 - 180360 - | hypothetical protein Caul_0161 181931 - 181173 - | hypothetical protein TERM 142 181816 - 181801 - G 75 -8.2 -4.14874 | opp_overlap 181800 181801, overlap 181790 AGAACAGCGTCAAAA GGCGCC TCGC GACGCC GTTCTTCAACTAAGA Caul_0162 183133 - 182015 - | DNA polymerase III subunit beta TERM 143 183243 - 183276 + r 83 -15.3 -3.1634 | gap 1, opp_overlap 183235, overlap 183236 GGGAAGAGGGGGCGC GCCACGGGGTGCGGCG AAA TGC-GCGTCCCGTGGC TTCGATCGTTTCGAG Caul_0163 183925 - 183407 - | methionine sulfoxide reductase A TERM 144 183599 - 183614 + g 83 -4.6 -4.84359 | GTCGACGTCCTCGAT GGTCTC CTGG GCGACC TTTTTCTGCGCGTCG Caul_0164 184402 - 184034 - | hypothetical protein TERM 145 184415 - 184473 + r 74 -14.5 -2.55351 | gap 1, opp_overlap 184418 184421 184439, overlap 184417 CATGGGCTTCTCCCA ATAGGAT-GTCGCGGCCCCGCGAAACGG CGAA CCGTCTCGCGGGGCCGGGACGATCAGGC CTTGGTGTCGAACGA TERM 146 184470 - 184418 - R 100 -25 -3.01712 | gap 1, opp_overlap 184415 184417, overlap 184421 184439 GGGCTTCTCCCAATA GGAT-GTCGCGGCCCCGCGAAACGG CGAA CCGTCTCGCGGGGCCGGGACGATCA GGCCTTGGTGTCGAA TERM 147 184466 - 184421 - R 100 -26.9 -2.73875 | opp_overlap 184415 184417, overlap 184418 184439 CTTCTCCCAATAGGA TGTCGCGGCCCCGCGAAACGG CGAA CCGTCTCGCGGGGCCGGGACG ATCAGGCCTTGGTGT Caul_0165 185085 - 184468 - | GrpE protein Caul_0166 186173 - 185097 - | heat-inducible transcription repressor Caul_0167 186297 - 187025 + | ribonuclease PH Caul_0168 187390 - 187160 - | XRE family transcriptional regulator Caul_0169 187944 - 187411 - | hypothetical protein Caul_0170 188201 - 188022 - | hypothetical protein Caul_0171 188886 - 188284 - | glutathione S-transferase domain-containing protein Caul_0172 188914 - 189519 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 148 190720 - 190703 - g 73 -7 -4.19238 | opp_overlap 190703 CGCCTAAGGTGAAAA GTCTGG TCGAGG CCAGAC TTCTCGTTGACGATC Caul_0173 189643 - 190806 + | oxygen-independent coproporphyrinogen III oxidase Caul_0174 190887 - 191771 + | uroporphyrin-III C/tetrapyrrole methyltransferase Caul_0175 191768 - 192187 + | hypothetical protein Caul_0176 192184 - 192999 + | hypothetical protein Caul_0177 193091 - 193591 + | TspO and MBR like protein Caul_0178 193794 - 194747 + | glutathione synthetase TERM 149 195389 - 195424 + G 74 -12.4 -3.54424 | GGCCAGATCCTGTCG GCTCCCGCGCCCGGTC CGGT GACCGAGGGCGAGGGC TTTCGCGACCTGCGC Caul_0179 194870 - 196420 + | Mg chelatase, subunit ChlI Caul_0180 196417 - 196878 + | GCN5-related N-acetyltransferase TERM 150 196902 - 196930 + T 100 -20.3 -3.65314 | overlap 196903 CCCTGGCATGGCGGG ACCCAGCCGGCTC CGG GAGCCGGCTGGGG TTGTTCGAAGTTCCA TERM 151 196903 - 196929 + T 100 -23.8 -2.78867 | overlap 196902 CCTGGCATGGCGGGA CCCAGCCGGCTC CGG GAGCCGGCTGGG GTTGTTCGAAGTTCC Caul_0181 197751 - 197077 - | OmpA/MotB domain-containing protein TERM 152 197726 - 197738 + g 79 -4.7 -4.73613 | overlap 197723 197727 GCGCCCATCATGGCC ACGCC GAT GGCGG TTTTCTTGATCATGG Caul_0182 197970 - 198905 + | 2OG-Fe(II) oxygenase TERM 153 199016 - 198992 - T 100 -19.3 -5.63517 | opp_overlap 198992 CCGCCAAAGAAAAAA GCCCCGGAGCA CGA CGCTCCGGGGC TTTTCCTTGGCCGAT TERM 154 198992 - 199016 + T 100 -18.6 -4.41047 | opp_overlap 198992 CCGCCAAAGAAAAAA GCCCCGGAGC ACGAC GCTCCGGGGC TTTTCCTTGGCCGAT Caul_0183 200728 - 199040 - | Flp pilus assembly protein TadG TERM 155 200818 - 200776 - R 75 -13.5 -3.04144 | gap 1, opp_overlap 200777, overlap 200785 CCGGGACGGTGAACA GGCCGCAAACGACGATGGTG AATC CGCCATCGTCGCTTG-GGCT TTAGTCTCGGACCTC TERM 156 200777 - 200817 + r 100 -17 -3.83205 | gap 1, opp_overlap 200776 200785 CGGGACGGTGAACAG GCCGCAAACGACGATGGTG AATC CGCCATCGTCGCTTG-GGC TTTAGTCTCGGACCT TERM 157 200810 - 200785 - R 77 -13.3 -3.57615 | opp_overlap 200777, overlap 200776 TGAACAGGCCGCAAA CGACGATGGTG AATC CGCCATCGTCG CTTGGGCTTTAGTCT Caul_0184 202662 - 200833 - | peptidyl-dipeptidase A TERM 158 202786 - 202773 - H 81 -3.7 -5.00616 | GTCCTTTTGAAAAAA GCCGC GAGA GCTGC TATAGGCTCGCCTCG Caul_0185 202834 - 204048 + | radical SAM protein TERM 159 204051 - 204107 + G 80 -16.7 -3.14132 | gap 4 GGCGGCGGCCTGATG CCGGACC-GCGCCTCGCCGGACGCCGCCA TGA TGGCGG-GTCC--CGAGGCGCTGGCGCGG TTCCTGGAAACGGCC Caul_0186 204048 - 204464 + | hypothetical protein Caul_0187 204991 - 204494 - | hypothetical protein TERM 160 205036 - 205014 - H 76 -9.8 -3.83026 | TCCCCTTAGACGAAA GCCCCATCCG CCC CGGATGGATC ACGCCTTAAAGCCTT TERM 161 205137 - 205179 + H 71 -10.7 -3.40522 | gap 1, opp_overlap 205133 205132, overlap 205138 TTTCCGGAAAGGCGC CT-TTCTTGAACCCTCGCCC GGAG GGGAGAGGGTTCAAGAGCAC TTATGCTCGGCGGAT TERM 162 205138 - 205178 + H 74 -14.2 -2.64099 | gap 1, opp_overlap 205133 205132, overlap 205137 TTCCGGAAAGGCGCC T-TTCTTGAACCCTCGCCC GGAG GGGAGAGGGTTCAAGAGCA CTTATGCTCGGCGGA TERM 163 205300 - 205325 + H 74 -5.3 -4.63527 | gap 1, overlap 205302 TGAAAGCACGGGGAG GGGCGTC-GGCC GGC GACCTGACGCGC TTTTTGGGGTGGTCG TERM 164 205715 - 205699 - H 72 -13.7 -2.71712 | opp_overlap 205698, overlap 205698 CGCGCGTCCGCAAAG CCTCCCC TGT GGGGAGG GTTGCCTCAGTCGCA Caul_0188 205820 - 206248 + | hypothetical protein Caul_0189 206271 - 207110 + | hypothetical protein Caul_0190 208984 - 207254 - | major facilitator transporter Caul_0191 210614 - 209019 - | histidine kinase TERM 165 209324 - 209286 - G 79 -15.3 -3.30441 | gap 2 GATCAGGTCGTAGAA GCC-GC-GCGACAGGGCCG AGA CGGCCTCGTCGCCGCTGGC GATGCGGTCGACCTT Caul_0192 211201 - 210668 - | GCN5-related N-acetyltransferase TERM 166 211007 - 210952 - G 74 -16.8 -2.75825 | overlap 210949 210948 210992 GCGTGAAGAAACCGA GCACCCCGACGGGACCTTCGTCCTCG AGAT CGATCACGAAGGTGGCGTCGCGGCGC CGGTCCTGGGCCTGG TERM 167 211302 - 211341 + r 93 -17.8 -3.322 | opp_overlap 211307, overlap 211307 211339 CGAGCGCGGACAAAA CAAAAGCGGGGAGCCCGG CGTT CCGGACTCCCCGCTTCGG TTCGTCTGTCCGGAT TERM 168 211307 - 211336 + r 95 -20.7 -3.23235 | opp_overlap 211307, overlap 211302 GCGGACAAAACAAAA GCGGGGAGCCCGG CGTT CCGGACTCCCCGC TTCGGTTCGTCTGTC TERM 169 211336 - 211307 - R 100 -22.9 -5.18371 | opp_overlap 211307 211302 GCGGACAAAACAAAA GCGGGGAGCCCGG CGTT CCGGACTCCCCGC TTCGGTTCGTCTGTC Caul_0193 211674 - 211402 - | 50S ribosomal protein L27 Caul_0194 212269 - 211754 - | ribosomal protein L21 TERM 170 212316 - 212289 - H 81 -9.8 -4.1552 | TAGCGCCTTAAGAAA CGTGCGTTCGCA AAAT TGGGAACGCCCG CCAGGAAACCCAGCG TERM 171 213028 - 213067 + G 70 -8.4 -3.86346 | opp_overlap 213016 ATACGAGGAGCTCAT CCTCGGCGCGGCGCTGAT CGTC ATCGGCGCGGCGGTGGCG TTTCTGAAGACGTAG Caul_0195 212456 - 213082 + | hypothetical protein TERM 172 213577 - 213549 - g 76 -2.3 -4.68506 | opp_overlap 213568, overlap 213550 AATGAAGCGCAAAAA CGGATTCGACG CCATCAT CGTCGAGACCA CCGGCCTGGCCGACC Caul_0196 213274 - 214368 + | cobalamin synthesis protein P47K TERM 173 214551 - 214515 - T 85 -15.2 -3.53012 | opp_overlap 214518 214521, overlap 214479 214517 214518 214521 CCGCGCCGCCCCAAA CAGGAAGGCCCGGAAC GGAAA GTTCCGGGCCTTCTTC AATTCGGGCTCAGTG TERM 174 214549 - 214517 - T 93 -17.8 -3.34398 | opp_overlap 214518 214521, overlap 214479 214515 214518 214521 GCGCCGCCCCAAACA GGAAGGCCCGGAAC GGAAA GTTCCGGGCCTTCT TCAATTCGGGCTCAG TERM 175 214518 - 214548 + T 100 -21.3 -3.17723 | opp_overlap 214479 214517 214515 214518 214521, overlap 214521 CGCCGCCCCAAACAG GAAGGCCCGGAAC GGAAA GTTCCGGGCCTTC TTCAATTCGGGCTCA TERM 176 214548 - 214518 - T 100 -21.3 -2.60496 | opp_overlap 214518 214521, overlap 214479 214517 214515 214521 CGCCGCCCCAAACAG GAAGGCCCGGAAC GGAAA GTTCCGGGCCTTC TTCAATTCGGGCTCA TERM 177 214521 - 214545 + T 100 -17.2 -3.73068 | opp_overlap 214521 214518 214517 214515, overlap 214518 CGCCCCAAACAGGAA GGCCCGGAAC GGAAA GTTCCGGGCC TTCTTCAATTCGGGC TERM 178 214545 - 214521 - T 93 -17.2 -3.45571 | opp_overlap 214518 214521, overlap 214518 214517 214515 CGCCCCAAACAGGAA GGCCCGGAAC GGAAA GTTCCGGGCC TTCTTCAATTCGGGC Caul_0197 214998 - 214561 - | biopolymer transport protein ExbD/TolR TERM 179 215091 - 215124 + r 86 -12.3 -4.15565 | opp_overlap 215095, overlap 215094 GGGCCGAAGGCACGA AAAAGGGGCCGGACG CTGG CGTCCGGCCCCCTGA TTTTCGCGTGATCGC TERM 180 215094 - 215121 + r 90 -18.4 -3.10098 | opp_overlap 215095, overlap 215091 CCGAAGGCACGAAAA AGGGGCCGGACG CTGG CGTCCGGCCCCC TGATTTTCGCGTGAT TERM 181 215120 - 215095 - R 100 -21.9 -4.77157 | opp_overlap 215094 215091 CGAAGGCACGAAAAA GGGGCCGGACG CTGG CGTCCGGCCCC CTGATTTTCGCGTGA Caul_0198 215599 - 215150 - | biopolymer transport protein ExbD/TolR Caul_0199 215835 - 216857 + | WD-40 repeat-containing protein Caul_0200 217606 - 216929 - | nitroreductase Caul_0201 217700 - 218377 + | monofunctional biosynthetic peptidoglycan transglycosylase Caul_0202 218389 - 218934 + | GCN5-related N-acetyltransferase Caul_0203 219146 - 218946 - | hypothetical protein Caul_0204 219312 - 219716 + | membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG) TERM 182 219712 - 219753 + F 100 -8.1 -5.26875 | gap 1, overlap 219701 219702 219713 TCCTGGCGGTCGGCG CCTAGGCCGTCCGA-CTGAT TGC ATCAGGTCGGATGCTCTAGA TTTTTTGGTTGACGC TERM 183 219713 - 219752 + F 78 -11.6 -3.75402 | gap 1, overlap 219701 219702 219712 CCTGGCGGTCGGCGC CTAGGCCGTCCGA-CTGAT TGC ATCAGGTCGGATGCTCTAG ATTTTTTGGTTGACG TERM 184 220040 - 220082 + G 85 -16.9 -3.62096 | CTGGTTCGCCTGTTC GGCCTTGGGGCTGGGGGCG CTGAT CGTCGCCTTCCCCAAGGCC TTTCACCTGCTGGCC Caul_0205 219807 - 220493 + | lysine exporter protein LysE/YggA Caul_0206 220606 - 221217 + | hypothetical protein TERM 185 221232 - 221273 + T 74 -9.3 -3.85817 | opp_overlap 221238, overlap 221236 221238 AAGCCTGACCTGACA AAAAAAGGCCGCCTTCCCC AGCC GGAGGAGGCGGCCTCTTCG TTTCTAGGGCGCCCT TERM 186 221236 - 221269 + T 85 -14.5 -3.6053 | opp_overlap 221238, overlap 221232 221238 CTGACCTGACAAAAA AAGGCCGCCTTCCCC AGCC GGAGGAGGCGGCCTC TTCGTTTCTAGGGCG TERM 187 221238 - 221267 + T 91 -17.1 -3.37915 | opp_overlap 221238, overlap 221236 221232 GACCTGACAAAAAAA GGCCGCCTTCCCC AGCC GGAGGAGGCGGCC TCTTCGTTTCTAGGG TERM 188 221267 - 221238 - T 100 -17.1 -5.626 | opp_overlap 221238 221236 221232 GACCTGACAAAAAAA GGCCGCCTTCCCC AGCC GGAGGAGGCGGCC TCTTCGTTTCTAGGG Caul_0207 222072 - 221290 - | short-chain dehydrogenase/reductase SDR Caul_0208 222127 - 222549 + | hypothetical protein Caul_0209 222542 - 223174 + | YhhN family protein Caul_0210 223345 - 223833 + | GCN5-related N-acetyltransferase Caul_0211 223940 - 226045 + | catalase Caul_0212 227815 - 226196 - | AMP-dependent synthetase and ligase Caul_0213 228933 - 227881 - | 3-isopropylmalate dehydrogenase Caul_0214 229248 - 228946 - | antibiotic biosynthesis monooxygenase TERM 189 229302 - 229320 + r 71 -8.8 -3.87994 | GCTCGCCTTTGGCTC GCACCTCA GGA TGAGGAGC TTTGTGCAACTGAAT Caul_0215 229993 - 229385 - | 3-isopropylmalate dehydratase, small subunit Caul_0216 231435 - 229993 - | isopropylmalate isomerase large subunit TERM 190 230070 - 230033 - G 71 -9.7 -3.78022 | CGCACATCGACCAAA TGGCCCGCGATCGCCGC CGCC GCGGCCATGGCCGGCGA GACCAGGTGGGTGCG TERM 191 231572 - 231625 + r 100 -20.5 -3.54424 | gap 1, opp_overlap 231585, overlap 231580 GCGCATGTTTCTTGC CCGGAAAACGA-AAGAGGGCGCGCTG TCG TGGCGCGCCCTCGTGTCGTTTTTTGG TTTCGAGACCTGAGG TERM 192 231580 - 231617 + r 100 -14.9 -5.37593 | gap 1, opp_overlap 231585, overlap 231572 TTCTTGCCCGGAAAA CGA-AAGAGGGCGCGCTG TCG TGGCGCGCCCTCGTGTCG TTTTTTGGTTTCGAG TERM 193 231611 - 231585 - R 100 -16.6 -4.19735 | opp_overlap 231580 231572 GCCCGGAAAACGAAA GAGGGCGCGC TGTCGTG GCGCGCCCTC GTGTCGTTTTTTGGT TERM 194 231823 - 231800 - R 100 -17.4 -5.27938 | opp_overlap 231796 231820 ACCGCCAAAGAAAAA GGCCCCGGCG TTTC CGCCAGGGCC TCGATCCTTCGCAAG Caul_0217 232243 - 231848 - | 50S ribosomal protein L19 Caul_0218 232985 - 232248 - | tRNA (guanine-N1)-methyltransferase TERM 195 232454 - 232477 + g 76 -7.5 -4.258 | gap 1 TCGTGTACTGCGGAT GCT-CGAGGA GACCG TCCTCGAAGC TTTCTTCCTGCGTGC TERM 196 232736 - 232787 + g 71 -11.5 -3.65351 | gap 2, opp_overlap 232736 CGCTCATGTACAAAA GCGGCCGTCCACCGACCTCCACGCT GTCC AGCGCGGCGG-CGATG-ACGTCCGC TTTGAGTACCGCTCC TERM 197 232787 - 232736 - G 100 -15.9 -4.42386 | gap 2, opp_overlap 232736 CGCTCATGTACAAAA GCGGCCGTCCACCGACCTCCACGCT GTCC AGCGCGGCGG-CGATG-ACGTCCGC TTTGAGTACCGCTCC TERM 198 233100 - 233144 + r 75 -12.1 -3.55548 | opp_overlap 233140, overlap 233073 233138 233141 GGCTAAATTTCGACG CCGCGTCAGTCGGCAACCTCA TCC TGAGCTTGTCGAAGGACGAGG TTTCCACGCCTCTTG Caul_0219 233355 - 233161 - | hypothetical protein TERM 199 233400 - 233420 + H 72 -4 -4.58395 | opp_overlap 233408, overlap 233409 GTCCAAACCAAAGCC CGGGAA GAGGGGAGG TTCCCG TTTTTCGACCGTGGC Caul_0220 233648 - 234451 + | hypothetical protein TERM 200 237329 - 237364 + G 71 -11 -3.65351 | overlap 237330 TCGACGTCGCCCGTG AGGTCATGCAGGGCGC CGCC GCGCCCGCCGTGACCA TTTCGGTGCCGCTGA TERM 201 237330 - 237363 + G 70 -14.5 -2.78996 | overlap 237329 CGACGTCGCCCGTGA GGTCATGCAGGGCGC CGCC GCGCCCGCCGTGACC ATTTCGGTGCCGCTG Caul_0221 234502 - 237423 + | DNA polymerase I TERM 202 238328 - 238348 + G 71 -10.3 -3.7732 | opp_overlap 238293 ATCGCCATGACCATC GCCATCGCC CTG GGCGGCGGC TTGTTGCTGTCGGGC Caul_0222 237725 - 239653 + | methyl-accepting chemotaxis sensory transducer TERM 203 239709 - 239684 - T 78 -11.7 -3.7282 | opp_overlap 239684 CGATCGGATGAAGAA GGGCTCTCCGG GCGA CCGGGGGGCCC TTTTGTCGTCTAGTA TERM 204 239684 - 239709 + T 100 -16.1 -4.52047 | opp_overlap 239684 CGATCGGATGAAGAA GGGCTCTCCGG GCGA CCGGGGGGCCC TTTTGTCGTCTAGTA Caul_0223 240510 - 239719 - | response regulator receiver protein Caul_0224 240598 - 241155 + | hypothetical protein Caul_0225 241236 - 241958 + | TetR family transcriptional regulator Caul_0226 242157 - 244394 + | TonB-dependent receptor TERM 205 244417 - 244448 + F 100 -21.6 -4.56367 | TCGACTTCAACTCTC CGGCGACGGCTTGC TTGC GCGGGCCGTCGCCG TTTCTTTGTCCACTC Caul_0227 244486 - 245802 + | major facilitator transporter TERM 206 246857 - 246833 - g 100 -19.3 -3.95324 | GACGCTGAACAAGAA CGGCAAGCCCG CCT CGGGCTCGCCG GCCACCTTCCACGAG TERM 207 247328 - 247311 - g 70 -8.3 -3.87815 | opp_overlap 247314 CGCTATGGCCAGAAA CCGGGCC TGGT GGCCCTG ACCTTCGATGACGGC Caul_0228 245883 - 249257 + | polysaccharide deacetylase TERM 208 249297 - 249308 + F 88 -4.4 -5.252 | TTCCGCATTGCGACT GGTA GCGG TACC TTTTTTATCGCGCTC TERM 209 249777 - 249755 - g 79 -14.8 -3.37513 | AGACGTCAAGACCAA CGCCGCCGAG ATG CTCGGCCGCG TGCTGGTGACCCACC Caul_0229 249510 - 250709 + | succinyl-CoA synthetase subunit beta Caul_0230 250715 - 251599 + | succinyl-CoA synthetase, alpha subunit TERM 210 251705 - 251669 - f 83 -5 -5.06451 | opp_overlap 251673 GACGATCCGAAAAAA TCACCTGGGTCCCG TTCGTTAGG CGGGCGCCCGGTGA TTGAGAGACTATATT Caul_0231 251769 - 254732 + | alpha-ketoglutarate decarboxylase TERM 211 254899 - 254885 - g 78 -10 -4.1673 | GAAGCGGTGAAGAAA GACGAG GTC CTCGTC GAACTCGAAACCGAC TERM 212 255532 - 255496 - g 70 -12.3 -3.30771 | opp_overlap 255499 255502, overlap 255486 255499 GGACATCTTCGAGAA GAAGCACGGCGTGAAGC TGG GCTTCATGTCGTTCTTC ACCAAGGCGGTCGTC TERM 213 255502 - 255526 + G 74 -12.9 -3.61398 | opp_overlap 255499 255496, overlap 255499 CTTCGAGAAGAAGCA CGGCGTGAAGC TGG GCTTCATGTCG TTCTTCACCAAGGCG TERM 214 255745 - 255710 - g 79 -5.4 -4.70659 | gap 1, overlap 255733 255734 GCCGAGATCGAAAAA GCCATCG-GCGCCCT GGGCAAG AAGGCCCGCGACGGC CAACTGGCCATCGAG Caul_0232 254792 - 256036 + | dihydrolipoamide acetyltransferase TERM 215 256066 - 256085 + F 100 -12.8 -4.98531 | GATTGAATGCGGAAT GGGGTCGC GAAA GCGGCCCC TTTTTCGTTTCGGCG Caul_0233 256162 - 256431 + | SpoVT/AbrB domain-containing protein TERM 216 256436 - 256454 + G 77 -11 -3.95787 | opp_overlap 256451 CCTTCTGGTGACCCT GGCGTTGG ACA CCAACGTC TTTGTCGATCTGATC Caul_0234 256428 - 256838 + | PilT domain-containing protein Caul_0235 257068 - 258468 + | dihydrolipoamide dehydrogenase TERM 217 258495 - 258524 + T 91 -15.7 -3.93288 | opp_overlap 258512 CAGGGATCAAGATCG CGGCGGGGTTTCG GAAA CGAGGCCTCGCCG TTTCCTTGCCTGGCC TERM 218 258621 - 258596 - T 100 -19 -4.48987 | opp_overlap 258596 GGTCTACAAGGAAAA GCCCCGCCGG GGCGAA CCGGCGGGGC TTCCTAAGTCCTCGA TERM 219 258596 - 258621 + T 93 -19 -3.19463 | opp_overlap 258596 GGTCTACAAGGAAAA GCCCCGCCGG GGCGAA CCGGCGGGGC TTCCTAAGTCCTCGA Caul_0236 260668 - 258686 - | methyl-accepting chemotaxis sensory transducer Caul_0237 260923 - 262947 + | sulfatase Caul_0238 263896 - 262976 - | site-specific tyrosine recombinase XerC TERM 220 263936 - 263915 - R 70 -10.2 -3.53811 | overlap 263934 CTCACCCTTCCCAAA CGCTTGTC ATCCCG GACAAGCG CGCAGCGCGCCGATC TERM 221 263943 - 264000 + r 93 -18.9 -3.17075 | opp_overlap 263934 GGACAAGCGCGCAGC GCGCCGATCCGGGACCGCCGGAAGCGC ATGC GCTCAGGCGTCGGTCCCGGGTCTGCGC TTCGCTTCGCCCGGG TERM 222 264062 - 264041 - R 70 -10.1 -3.6106 | TTGAACACGTGGAAA TCCTCCGCC GCTC GGGGGAGGA GAAAGGTCACAGGAT Caul_0239 264749 - 264069 - | hypothetical protein Caul_0240 264904 - 267078 + | primosome assembly protein PriA Caul_0241 268665 - 267094 - | EmrB/QacA family drug resistance transporter Caul_0242 269685 - 268909 - | integral membrane protein TerC Caul_0243 269804 - 270901 + | acyltransferase 3 Caul_0244 270969 - 271661 + | CHAP domain-containing protein Caul_0245 271713 - 272672 + | Mg2 transporter protein CorA family protein Caul_0246 272743 - 273981 + | pentapeptide repeat-containing protein Caul_0247 274156 - 274998 + | phytanoyl-CoA dioxygenase TERM 223 275824 - 275795 - g 76 -2.9 -4.7373 | gap 2, overlap 275797 275798 275801 CTATTTCATCAAAAA CAG-C-AACCCGC GGCAGG GCGGGCTGGGCTG AGGCTTCTCGATACC Caul_0248 274995 - 275825 + | dTDP-6-deoxy-L-hexose 3-O-methyltransferase Caul_0249 276767 - 275907 - | enoyl-CoA hydratase/isomerase Caul_0250 276866 - 277657 + | 17 kDa surface antigen TERM 224 277702 - 277678 - T 81 -15.7 -3.07816 | opp_overlap 277680 277698, overlap 277680 GGCTGAGCGACCGAA CACTTGCCCCC GTA GGGGGCGAGTG TTCGCCGTGCGAGGC TERM 225 277680 - 277700 + T 78 -14.7 -3.04144 | opp_overlap 277680 277678, overlap 277698 CTGAGCGACCGAACA CTTGCCCCC GTA GGGGGCGAG TGTTCGCCGTGCGAG TERM 226 277700 - 277680 - T 71 -12.5 -3.09878 | opp_overlap 277680 277698, overlap 277678 CTGAGCGACCGAACA CTTGCCCCC GTA GGGGGCGAG TGTTCGCCGTGCGAG Caul_0251 278170 - 277724 - | hypothetical protein TERM 227 277774 - 277802 + g 100 -16.8 -4.25104 | gap 1, overlap 277778 TGATCTCATCCGCCA CGATCGCCCGGTG GCAG CACCGGGCG-TCG TTTTCGTAGCAAAGC TERM 228 277778 - 277799 + g 85 -17.3 -3.13504 | overlap 277774 CTCATCCGCCACGAT CGCCCGGTG GCAG CACCGGGCG TCGTTTTCGTAGCAA TERM 229 278059 - 278033 - G 79 -11.5 -4.07885 | gap 1 CATGGTCTTGGAAAA GCCG-GGCCGGC GCGA GGCGGCCACGGC GCGGACATCGACGAC Caul_0252 278244 - 279161 + | alpha/beta hydrolase fold TERM 230 279395 - 279415 + G 79 -5.3 -4.72188 | CCAGACTCCTTTGCC GACCTTGCG CGT CGCGGCGTC TTTGTTTTCGATTGG Caul_0253 279158 - 279601 + | hypothetical protein Caul_0254 280548 - 279598 - | hypothetical protein Caul_0255 281219 - 280734 - | ferric uptake regulator family protein TERM 231 281132 - 281181 + g 82 -14.9 -3.45023 | gap 1 CCGCGCCGCAGCGGG CCTCGGCGGCGGCGAGTTCGGC TTCGAGC GCCGAGC-CGGCGACGCCGTGG TTGTGGTGATCGTGA TERM 232 281307 - 281335 + r 74 -5.2 -4.62069 | opp_overlap 281307, overlap 281324 CGTCGCGACCGAAAT CCTCGTCCTTCG GCAGG CTCAGGATGAGG TTTTTCCAATGCCGA Caul_0256 282148 - 281387 - | acid phosphatase TERM 233 282017 - 281990 - G 81 -7.7 -4.56597 | gap 1 GCGGGTGGCCAAAAA GGTCGCGCGATC CTGTT GATCG-GCGGCC GATCCGGCGACGGGC TERM 234 282151 - 282184 + r 74 -9.5 -3.87075 | opp_overlap 282155, overlap 282152 282155 282159 ATTGAACGCGCATGA AAAAGGGTCCCCGAA GCAC TTCGGGGACCCTGCA TTTCTCGGGGCTGAT TERM 235 282152 - 282183 + r 70 -13 -2.91924 | opp_overlap 282155, overlap 282151 282155 282159 TTGAACGCGCATGAA AAAGGGTCCCCGAA GCAC TTCGGGGACCCTGC ATTTCTCGGGGCTGA TERM 236 282155 - 282180 + r 87 -19.1 -2.70354 | opp_overlap 282155, overlap 282152 282151 282159 AACGCGCATGAAAAA GGGTCCCCGAA GCAC TTCGGGGACCC TGCATTTCTCGGGGC TERM 237 282180 - 282155 - R 100 -19.1 -4.73388 | opp_overlap 282152 282151 282155 282159 AACGCGCATGAAAAA GGGTCCCCGAA GCAC TTCGGGGACCC TGCATTTCTCGGGGC TERM 238 282279 - 282263 - R 71 -8.7 -3.83026 | overlap 282264 GGGGCCCAGATGAAA CCCAGAG AAG CTCTGGA TGAATCTGGATCCCG Caul_0257 283407 - 282355 - | deoxyhypusine synthase-like protein Caul_0258 285078 - 283816 - | Orn/DAP/Arg decarboxylase 2 Caul_0259 285325 - 286137 + | phosphonate ABC transporter, ATPase subunit Caul_0260 286134 - 287168 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein Caul_0261 287190 - 288005 + | phosphonate ABC transporter, inner membrane subunit Caul_0262 288368 - 289624 + | phosphate-selective porin O and P TERM 239 289671 - 289627 - f 81 -15.6 -3.04144 | gap 1, opp_overlap 289627 289628, overlap 289653 289654 GCTGGACTTCTAAGA CCCTCCGGACCGGCCTCCCGC GCAA ACGGGGGGCCGGTCCGG-GCC CTTTTCAAAGCTCTC TERM 240 289627 - 289672 + F 100 -16 -4.10657 | opp_overlap 289627 289653 289654, overlap 289628 GCTGGACTTCTAAGA CCCTCCGGACCGGCCTCCCG CGCAAA CGGGGGGCCGGTCCGGGCCC TTTTCAAAGCTCTCG TERM 241 289628 - 289671 + F 93 -19.5 -3.06073 | opp_overlap 289627 289653 289654, overlap 289627 CTGGACTTCTAAGAC CCTCCGGACCGGCCTCCCG CGCAAA CGGGGGGCCGGTCCGGGCC CTTTTCAAAGCTCTC Caul_0263 289707 - 290750 + | phosphate ABC transporter, periplasmic phosphate-binding protein PstS, putative TERM 242 290807 - 290771 - f 81 -10 -4.18908 | gap 1, opp_overlap 290776 ACACCGTTAAAACAA GGCGACGCCGCGGTCCC CAGT GGG-CCGCGGCGTTTTC TTTTGTATAGTGGGC TERM 243 290776 - 290802 + F 100 -18.7 -5.23292 | opp_overlap 290771 GTTAAAACAAGGCGA CGCCGCGGTCC CCAGT GGGCCGCGGCG TTTTCTTTTGTATAG Caul_0264 290863 - 292161 + | hypothetical protein Caul_0265 292842 - 293627 + | putative aspartyl protease Caul_0266 294715 - 293624 - | glycosyl transferase group 1 Caul_0267 295545 - 294715 - | metallophosphoesterase Caul_0268 295823 - 296452 + | TetR family transcriptional regulator TERM 244 297164 - 297144 - g 71 -3.1 -4.60797 | overlap 297146 297147 GCGTCATACACAAAA TACCCACGA CCG CCGGGGGTG GGCGGGTCGCGGTGC TERM 245 297522 - 297498 - g 70 -3.4 -4.45083 | opp_overlap 297498 CCTACAGCGACAAAA GCGGGGGCGT GGTCA ACGCCCGTAC TCCTTTCTCCTTCAC Caul_0269 296819 - 297808 + | TonB family protein TERM 246 298019 - 298003 - T 78 -15.1 -2.70932 | opp_overlap 298008 298014 CGTCTGGCCGAAGGA CGGCCCC GCT GGGGCCG CCGCGGCGCGGCCGG Caul_0270 299297 - 298830 - | AsnC family transcriptional regulator Caul_0271 299420 - 299677 + | hypothetical protein TERM 247 299747 - 299731 - f 84 -15.1 -3.30124 | overlap 299712 TGTCATCCCGGACAA GCCCGGC AAC GCCGGGC GCCGATCCGGGACCG TERM 248 299751 - 299797 + F 73 -13.1 -3.21218 | gap 2 GCAACGCCGGGCGCC GATCCGGGACCG-C-CGGAAGCT CAG AGTTCACGCGTCGGTCCCGGATC TTCGTGCTGCGCGCT Caul_0272 299982 - 301418 + | amino acid permease-associated region TERM 249 302167 - 302149 - g 73 -12.4 -3.50853 | overlap 302152 GTCCGGCAACGAGAA CCAGGCCG ATC CAGCCTGG CCGGCCCGCTACGCC Caul_0273 301454 - 303718 + | peptidase S8 and S53 subtilisin kexin sedolisin Caul_0274 303789 - 304937 + | acyl-CoA dehydrogenase domain-containing protein TERM 250 305014 - 304956 - T 90 -19.7 -2.54204 | gap 2, opp_overlap 304958, overlap 304954 304955 304993 CCAAAACGCAAAACG CCCCCGCCGGCTCTAGCCGGAACATCCCC TGT AAGGATGCTCCGGCG-GAGCCAGCGGAG- GCGTGTTTAAGATCC Caul_0275 305375 - 305064 - | hypothetical protein TERM 251 307499 - 307466 - g 85 -10.9 -4.2828 | overlap 307467 GGTCACCCAGCAAAA CGCGGCGATGGTCGA GCAG TCGACCGCCGCCACC CACTCGCTGAAGGGC TERM 252 307498 - 307467 - g 72 -14.4 -3.16647 | overlap 307466 GTCACCCAGCAAAAC GCGGCGATGGTCGA GCAG TCGACCGCCGCCAC CCACTCGCTGAAGGG Caul_0276 305763 - 307736 + | methyl-accepting chemotaxis sensory transducer Caul_0277 307736 - 308023 + | CheX protein Caul_0278 308020 - 308385 + | response regulator receiver protein Caul_0279 308434 - 310689 + | CheA signal transduction histidine kinase Caul_0280 310694 - 311161 + | CheW protein Caul_0281 311162 - 312040 + | MCP methyltransferase, CheR-type TERM 253 312495 - 312447 - g 85 -17.3 -3.14132 | overlap 312399 312459 312485 CTCGGTCCGCACCAA GCCCGACGACAAGCCGGCCGTGC GCC GCAAGGACTACATGCCGTCGGGC GACATCGTGGCGATC Caul_0282 312040 - 313065 + | chemotaxis-specific methylesterase Caul_0283 313070 - 313459 + | response regulator receiver protein TERM 254 313984 - 314014 + G 72 -4.6 -4.52047 | gap 1, opp_overlap 313947 CCCACCCCGGCCGTC GCGCC-GACCGCC AACAGC GGCGATCTGGAGC TTTTCTGATCTCATG Caul_0284 313456 - 314022 + | hypothetical protein TERM 255 314077 - 314093 + G 78 -13.7 -3.60627 | CGCCACCTCGGGGCA GCTCCCC CTG GGGGAGC TTTCGCGTCGGCTGG Caul_0285 314027 - 314413 + | CheU protein Caul_0286 314417 - 315001 + | response regulator receiver protein Caul_0287 314998 - 315468 + | CheE protein TERM 256 315472 - 315489 + F 75 -14.1 -3.10905 | overlap 315463 GACGACGCCTGATCG GCGCGGC CTGA GCCGCGC TTGGCTGGATTGTGA TERM 257 317074 - 317056 - g 71 -10.3 -3.78034 | CACCGACATGAAGAA GCCGAAG CTGGC CTTCGGC ACCAGCATCAGCGAC Caul_0288 315749 - 318538 + | TonB-dependent receptor TERM 258 318567 - 318600 + T 100 -21.9 -3.54424 | opp_overlap 318573, overlap 318573 CGACCAGGCTCAGAC GAGAAAGGCCGCCAG CTCG CTGGCGGCCTTTTTC TTTGGCGCGGTCGAG TERM 259 318594 - 318573 - T 100 -17.3 -4.0162 | opp_overlap 318567 318573 GGCTCAGACGAGAAA GGCCGCCAG CTCG CTGGCGGCC TTTTTCTTTGGCGCG TERM 260 318573 - 318594 + T 100 -17.3 -5.27335 | opp_overlap 318573, overlap 318567 GGCTCAGACGAGAAA GGCCGCCAG CTCG CTGGCGGCC TTTTTCTTTGGCGCG Caul_0289 319765 - 318626 - | N-acetylglucosamine-6-phosphate deacetylase Caul_0290 320856 - 319765 - | glutamine--fructose-6-phosphate transaminase (isomerizing) Caul_0291 321693 - 320944 - | GntR family transcriptional regulator Caul_0292 321946 - 324729 + | TonB-dependent receptor TERM 261 324738 - 324769 + F 90 -18 -2.84098 | overlap 324735 GTTCTAGCCGCCTAC CGGGACCTTCGGCG TCCG CGCCGGAGGTCCCA TCCTTCCTTCCGAGA TERM 262 324878 - 324904 + F 84 -15.1 -3.34984 | opp_overlap 324871, overlap 324878 324879 TGCAAGCACGGAGCT GGGGCGGAGCG GTCAA CGCTCCGCCCG CTTTTTGCCGCCTGT TERM 263 324878 - 324905 + F 100 -14.9 -4.59109 | gap 1, opp_overlap 324871, overlap 324878 324879 TGCAAGCACGGAGCT G-GGGCGGAGCG GTCAA CGCTCCGCCCGC TTTTTGCCGCCTGTC TERM 264 324879 - 324903 + F 87 -18.6 -2.60508 | opp_overlap 324871, overlap 324878 324878 GCAAGCACGGAGCTG GGGCGGAGCG GTCAA CGCTCCGCCC GCTTTTTGCCGCCTG Caul_0293 324940 - 327285 + | Beta-N-acetylhexosaminidase TERM 265 328168 - 328200 + G 79 -14.7 -3.25823 | CGCGGGGTGATGGCG GCGCCGGGCCTCGCC ATC GGCCAGGCCGTGCGC TTCGTCTCCGCCGAC Caul_0294 327313 - 329835 + | phosphoenolpyruvate-protein phosphotransferase TERM 266 331089 - 331121 + G 70 -8.4 -3.86015 | gap 1, overlap 331120 CTGATCGTCGAGGCC GTCGCCCCCAGCG CGGGCGGA CGC-GGGGCCGAC TTTCTCGCCGCCCTG Caul_0295 329841 - 331646 + | PTS system, N-acetylglucosamine-specific IIBC subunit Caul_0296 331678 - 333252 + | tryptophan halogenase TERM 267 334849 - 334799 - g 74 -13.9 -3.36273 | gap 2, overlap 334795 334801 334802 CGGCTTCAAGACCAA GACCCCCGACGCCG-C-CTCGGCGG AGG CCGCCGAGGGGCTGCGCCGGTGAGC GATCCGGCGCGCGAT TERM 268 334847 - 334801 - g 77 -15.1 -3.25073 | gap 2, overlap 334795 334799 334802 GCTTCAAGACCAAGA CCCCCGACGCCG-C-CTCGGCGG AGG CCGCCGAGGGGCTGCGCCGGTGA GCGATCCGGCGCGCG TERM 269 334846 - 334802 - g 73 -16.4 -2.54723 | gap 2, overlap 334795 334801 334799 CTTCAAGACCAAGAC CCCCGACGCCG-C-CTCGGCGG AGG CCGCCGAGGGGCTGCGCCGGTG AGCGATCCGGCGCGC Caul_0297 333249 - 334847 + | tryptophan halogenase Caul_0298 334844 - 335596 + | hypothetical protein TERM 270 335834 - 335792 - g 73 -12 -3.53012 | gap 1 GGCCGGTCGGCCAAA CCGAGGGCGCGTCGCGACG CGTCAT CGTCACCA-GCGGCCTCGG CCTGGCCCTGATGGC Caul_0299 335734 - 336765 + | alpha/beta hydrolase fold TERM 271 336781 - 336820 + F 100 -24.4 -3.53761 | overlap 336788 GCTCGGCTGCACTTA CGTTGAAGGGCGTCCGCC ACCC GGCGGACGCCCTTTGGCG TTTGGAAGGCGCTTG TERM 272 336788 - 336813 + F 100 -21.9 -3.71649 | overlap 336781 TGCACTTACGTTGAA GGGCGTCCGCC ACCC GGCGGACGCCC TTTGGCGTTTGGAAG TERM 273 336930 - 336951 + GF 81 -7.2 -4.42386 | CTTGGCCTGGGGCCT GGGGACCG CGTCGA CGGTCGCC TTTTATCGCTGGAGG TERM 274 337033 - 337050 + GF 72 -14.1 -2.71364 | GTGTTTCTGGCGCTC GGCGCCG TGCC CGGCGCC TGGTTGGCCGGGTCG Caul_0300 336868 - 337638 + | prolipoprotein diacylglyceryl transferase TERM 275 338696 - 338686 - gf 86 -6.8 -4.87786 | opp_overlap 338686 GGAACTGCAGAAAAA GGTC TTC GACC TGCTGTCGCTATCGA Caul_0301 337544 - 338989 + | radical SAM domain-containing protein TERM 276 339171 - 339186 + G 72 -4.6 -4.4078 | overlap 339162 CGGCGTGCCGATTGG GGTCGG CTTT CTGGCC TTTTGGTTCGGACGG Caul_0302 338986 - 339228 + | hypothetical protein Caul_0303 340888 - 339215 - | alpha amylase catalytic region Caul_0304 341940 - 340981 - | inosine/uridine-preferring nucleoside hydrolase Caul_0305 342587 - 341937 - | hypothetical protein TERM 277 342801 - 342839 + G 72 -14.5 -2.87344 | gap 2, overlap 342811 TGTTGATGCGCCAGG GCGCGGGCGACGCCTGGCC CAG GGCC-GGCGGCGCG-GCGC TCTATGCCGGGGGTG TERM 278 343475 - 343517 + G 82 -16.9 -3.28712 | gap 1, overlap 343476 GCGCGGGACGGTTCG GCGCGCACGGCGGCCGAGGC GGGC GTCGCGGCTGCGG-GCGCGC TTCTGGCGGCGAGGG TERM 279 343476 - 343534 + G 79 -10.7 -4.07885 | gap 1, overlap 343475 CGCGGGACGGTTCGG CGCGCACGGCGGCCGAGGCGGGCGTCGC GGCT GCGG-GCGCGCTTCTGGCGGCGAGGGCG TTTTCGAGCGAAGTG Caul_0306 342698 - 343606 + | ribokinase-like domain-containing protein TERM 280 343602 - 343588 - T 75 -3.4 -4.86731 | overlap 343589 TGCGTCGAAACAAAA GCCTAG AGC CCCGGC CTGATGCAATCAGGT Caul_0307 344888 - 343629 - | Na+ dependent nucleoside transporter Caul_0308 345170 - 347545 + | TonB-dependent receptor TERM 281 347591 - 347619 + F 100 -15.9 -4.15044 | overlap 347592 GTCCGGCGCCCTCGA CAGGGGCGGGTCC GCA GGACCCGCCCCGC TTTCTTGACGGCGGA TERM 282 347592 - 347618 + F 91 -19.4 -3.08812 | overlap 347591 TCCGGCGCCCTCGAC AGGGGCGGGTCC GCA GGACCCGCCCCG CTTTCTTGACGGCGG Caul_0309 347677 - 348705 + | LacI family transcription regulator Caul_0310 348777 - 349814 + | hypothetical protein TERM 283 349870 - 349903 + T 91 -16.8 -3.5944 | gap 1, overlap 349874 CCCATGATCACCGGC GGCGGGCAGGACGCC GCGCG GGCGTCCTGC-CGTC TTTGCCCCTATCGGT TERM 284 349874 - 349900 + T 90 -19.5 -2.62171 | overlap 349870 TGATCACCGGCGGCG GGCAGGACGCC GCGCG GGCGTCCTGCC GTCTTTGCCCCTATC Caul_0311 351008 - 349911 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 285 351077 - 351054 - H 100 -15.2 -5.14563 | GCGGCCATCAAAAAA GCCGCCCGGG GAAC CCCTGGCGGC TGGTGAAGACATTGA TERM 286 351174 - 351162 - H 74 -4.8 -4.55826 | GCTAAAATACCAAAA CAGC TGTTG GCTG GCGGCGAGGATCATG Caul_0312 351521 - 352315 + | DeoR family transcriptional regulator Caul_0313 354231 - 352321 - | Alpha-galactosidase Caul_0314 355355 - 354246 - | amidohydrolase 2 TERM 287 355579 - 355629 + G 70 -12.3 -3.27525 | CGCTTGGCGCGAGCC GGGCGTGGGCCGCGGTGTCCGTG GCGCG CGTGGGCGACGCGGCCCTGACCC TTGAGTTTGACGCCG Caul_0315 355491 - 357575 + | glycoside hydrolase clan GH-D Caul_0316 357572 - 358477 + | hypothetical protein TERM 288 358499 - 358528 + F 100 -20.1 -5.05782 | overlap 358487 CCTCCACTCCCCCCT GGAGCGGTCGTTG CCTG CAGCGACCGCTCC TTTTTTCGAGTGGGT Caul_0317 358649 - 359947 + | D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit Caul_0318 359940 - 361103 + | sugar isomerase (SIS) Caul_0319 361103 - 362080 + | ATPase BadF/BadG/BcrA/BcrD type Caul_0320 362073 - 362798 + | HAD family hydrolase Caul_0321 363036 - 365840 + | TonB-dependent receptor TERM 289 365945 - 365898 - f 77 -2.1 -5.07652 | gap 3, overlap 365900 365905 365936 TGCGTCAAAACAAAA GACTAGAGC-T--CCCGGCCTGAT GCA ATCAGGTCGGGAAACGCTCTAGAG GCGCGCCGCCGCCGG TERM 290 365943 - 365900 - f 79 -9.1 -4.16397 | gap 3, overlap 365898 365905 365936 CGTCAAAACAAAAGA CTAGAGC-T--CCCGGCCTGAT GCA ATCAGGTCGGGAAACGCTCTAG AGGCGCGCCGCCGCC TERM 291 365948 - 365992 + F 100 -20.7 -3.66654 | gap 1, opp_overlap 365936 AAACGCTCTAGAGGC GCG-CCGCCGCCGGTCCCGC CATCCA GCGGCGCCGGCGGCGGATGC TTTCCAGTTCACATA Caul_0322 366020 - 367459 + | hypothetical protein TERM 292 367880 - 367863 - T 72 -7.7 -4.14739 | TCACTTATCCGAAAA TGGAACG AAGT CGCTCCA ATCACCCTCCAACAG Caul_0323 369329 - 367848 - | hypothetical protein TERM 293 368376 - 368360 - G 83 -8.7 -4.62069 | GGTTTATTTCAAAAA GGTCAGA ACT TCCGACC AATTGAAGGCCTTCT TERM 294 368645 - 368674 + g 71 -10.7 -3.53811 | opp_overlap 368643 368645 368646, overlap 368646 CGGCCTGCTGAAATA GTTCGACCGCTCG ATTG CGAGCGGTCAAAA TTTCACGGAAATGGG TERM 295 368674 - 368645 - G 70 -12.9 -3.34398 | opp_overlap 368645 368646, overlap 368643 368646 CGGCCTGCTGAAATA GTTCGACCGCTCG ATTG CGAGCGGTCAAAA TTTCACGGAAATGGG TERM 296 368673 - 368646 - G 73 -16.4 -2.60496 | opp_overlap 368645 368646, overlap 368645 368643 GGCCTGCTGAAATAG TTCGACCGCTCG ATTG CGAGCGGTCAAA ATTTCACGGAAATGG Caul_0324 371281 - 369308 - | N-6 DNA methylase TERM 297 370193 - 370212 + g 72 -5 -4.42653 | GTCGCCTTTCCACTT TTCGAGTT CTGC AACCCGAA TTTTCTCGATGACGT Caul_0325 372277 - 371588 - | hypothetical protein Caul_0326 375145 - 372287 - | Ti-type conjugative transfer relaxase TraA Caul_0327 375317 - 375583 + | putative conjugal transfert protein, TraC Caul_0328 375567 - 375875 + | conjugal transfer TraD family protein Caul_0329 376411 - 375896 - | XRE family transcriptional regulator Caul_0330 376484 - 376759 + | hypothetical protein Caul_0331 377898 - 377404 - | hypothetical protein Caul_0332 378232 - 377891 - | ECF subfamily RNA polymerase sigma-24 factor Caul_0333 378693 - 378232 - | hypothetical protein Caul_0334 379187 - 378690 - | hypothetical protein TERM 298 379272 - 379257 - g 77 -3.3 -4.73864 | overlap 379241 CGAAGCAACAGAAAA TGTTC TCTTCG GAACA TGAAATGTTCAATAT Caul_0335 379256 - 379525 + | DNA-binding protein Caul_0336 379731 - 379931 + | phage transcriptional regulator, AlpA Caul_0337 380566 - 379976 - | hypothetical protein Caul_0338 381031 - 380570 - | DNA binding domain-containing protein TERM 299 381144 - 381178 + H 76 -8.5 -4.14739 | gap 1 GAGGCAGACCCTGCT CGCCG-CTTGCGGCGG CGGT CCGCCAGAAGTTGGCG TTTTCGAGTGGATCG TERM 300 381252 - 381236 - H 73 -6.5 -4.2828 | opp_overlap 381236 381221 TGCCATTTATGAAAA GCGATGC GGC GCATGGC CTTTCACAAGGCGCA TERM 301 381482 - 381534 + G 100 -25.6 -2.8547 | gap 1, opp_overlap 381474 381517 TCCAATACGGGACGC GGGCGACGGGGCCGGCGC-GGCG CCCCCACA CGCAAGCGCCGGCCCCGTCGCCG TCTGATCTGGCCGCT TERM 302 381635 - 381613 - g 91 -3.3 -5.45726 | gap 1 GACATCCTAAAAAAA GCCGCGCTCA TCTT CG-GAGCGGC CTCCCGATGAAGTTC Caul_0339 381331 - 381645 + | transposase IS3/IS911 family protein TERM 303 382204 - 382194 - g 75 -4.6 -4.56775 | opp_overlap 382175 ATCGCGCGCCAAAAA CCCG CGC CAGG CCTTATTCATCATTC Caul_0340 381642 - 382502 + | integrase catalytic region Caul_0341 383934 - 382624 - | integrase family protein Caul_0342 384772 - 384311 - | thioesterase superfamily protein Caul_0343 385706 - 384864 - | beta-lactamase domain-containing protein Caul_0344 386551 - 385805 - | hypothetical protein Caul_0345 387702 - 386647 - | RluA family pseudouridine synthase Caul_0346 387801 - 390311 + | TonB-dependent receptor TERM 304 390357 - 390322 - T 78 -15.4 -2.71731 | GGTAGGGTGGAAGCA TGACTGGGGACACGCG CATG CGCGTGTCCCCATCCG TGGTCGCTATCCCTC Caul_0347 390666 - 390364 - | hypothetical protein TERM 305 390620 - 390630 + g 72 -3.2 -4.56597 | TGCTGGGTCAGCGTC TTGC CGC GCAG TTTTTCGCGCGGAAC Caul_0348 390744 - 392468 + | alkaline phosphatase Caul_0349 393149 - 392520 - | lysine exporter protein LysE/YggA Caul_0350 393995 - 393189 - | hypothetical protein TERM 306 393855 - 393816 - G 78 -8.6 -4.2828 | gap 1 CGTCATCCAGGAAAA CAGCACCAAGCCG-TGG ATATGGA CCAGCGGCTCGGCCCTG AACCGGCCCTGGGCC Caul_0351 394557 - 394153 - | phosphoribosyl-AMP cyclohydrolase Caul_0352 394940 - 394647 - | transcriptional modulator of MazE/toxin, MazF Caul_0353 395227 - 394958 - | transcriptional regulator/antitoxin, MazE Caul_0354 396800 - 395262 - | UbiD family decarboxylase TERM 307 398397 - 398423 + G 74 -14.4 -3.2794 | GCGGTTGCCTATCCG GCGGGGTCGCCT GCG ACGCGACCCTGC TTGATGTCACTGGCG Caul_0355 396932 - 398686 + | hypothetical protein Caul_0356 400608 - 398818 - | ABC transporter related Caul_0357 400901 - 400629 - | hypothetical protein Caul_0358 401850 - 401617 - | hypothetical protein TERM 308 401900 - 401940 + H 81 -13.1 -3.75535 | opp_overlap 401900 CCGCGCTGGAGGAGA CGGCGGCCCTCGTCGGGTC CAC GAACCAGCGGGGATCGCCG TTTCGCTGTGTGTGA TERM 309 401973 - 401991 + H 95 -10.4 -4.56597 | ATGAGCCTCGGCGGG CGATCAAT CCA ATTGATCG TTTTTCGGAACAAGA TERM 310 402471 - 402529 + G 72 -13.8 -3.14344 | gap 1 TGATCCTGCTGTGCC TGGGTTGGCTGGCGATCGGGCTGGGCG TGCTGT CGCTGGGCCTGGTCGCC-GCCTATCCG TTCATGAAGCGCATC Caul_0359 402074 - 403012 + | 4-hydroxybenzoate polyprenyl transferase Caul_0360 403521 - 403168 - | hypothetical protein TERM 311 404557 - 404527 - g 90 -18.2 -3.53012 | opp_overlap 404523 TCTGTCGGTGCTAAA GGCGGCGTCCAGCA AGG CGCCGGCCGCCGCC CAAATTTAGCAGGCC Caul_0361 403574 - 404566 + | fatty acid desaturase Caul_0362 405003 - 404572 - | translation initiation factor 2, gamma subunit, GTPase Caul_0363 405103 - 405774 + | hypothetical protein Caul_0364 405818 - 406162 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_0365 406244 - 406765 + | hypothetical protein Caul_0366 407750 - 406866 - | NAD-dependent epimerase/dehydratase Caul_0367 407797 - 408138 + | hypothetical protein TERM 312 408462 - 408422 - g 70 -15.4 -2.80699 | gap 2, opp_overlap 408419 408420, overlap 408417 408419 TCGCAACGAACAGGA CGTCGGCGCGGCCCTGGCGG CCA CCGGC-GTGCCGCGC-GACG AGATCTTCCTGACCA Caul_0368 408255 - 409094 + | aldo/keto reductase Caul_0369 409859 - 409098 - | hypothetical protein TERM 313 409800 - 409835 + g 72 -13.2 -3.24188 | CGCCTGCCTCTGCAG GCTGATCAGCGCGACC TGGA GGTCGCGTAGCTCGGC TTCGTAGTCATCTGA Caul_0370 409906 - 410622 + | hypothetical protein Caul_0371 411823 - 410630 - | hypothetical protein TERM 314 413335 - 413315 - g 72 -3.2 -4.57073 | gap 1, overlap 413330 GAGGGGGCTGAAAAA CCG-CGCCC ACAT GAACGGCGG GTTCCTCGACGAGAC TERM 315 413404 - 413454 + G 75 -10.2 -4.09739 | overlap 413405 GGATCACGCCTGCCG AGCGCCTGCTGGCGCTCTACCACG GCG CGTGGAAGGGCGACATCAGCCGGG TTTTCGAAGACTTCG Caul_0372 412119 - 413477 + | glutamate--cysteine ligase Caul_0373 414320 - 413763 - | hypothetical protein Caul_0374 414507 - 416390 + | amino acid/peptide transporter Caul_0375 416478 - 416858 + | putative transposase of insertion sequence ISRm2011-2, orfA protein Caul_0376 416920 - 417423 + | transposase and inactivated derivatives-like protein TERM 316 417463 - 417484 + T 100 -17.3 -5.1861 | opp_overlap 417463 GCCCACGACGCAAAA GGCCCCGGA GCGA TCCGGGGCC TTTTTTGATGGTCGC TERM 317 417484 - 417463 - T 100 -17.3 -4.21194 | opp_overlap 417463 GCCCACGACGCAAAA GGCCCCGGA GCGA TCCGGGGCC TTTTTTGATGGTCGC Caul_0377 417983 - 417519 - | hypothetical protein Caul_0378 418726 - 417980 - | hydroxyacylglutathione hydrolase Caul_0379 418808 - 419641 + | methyltransferase type 11 Caul_0380 419656 - 420000 + | nitrogen regulatory protein P-II Caul_0381 421561 - 420005 - | major facilitator transporter TERM 318 420339 - 420373 + g 71 -9.8 -3.78775 | overlap 420340 ACGCCGGCCACGCCC AGGGCGCTGACGCCGA TCA TCGTGGCCAGCGCCCA TTTGGTGCTCCAGCG Caul_0383 423919 - 423119 - | endonuclease/exonuclease/phosphatase Caul_0382 421654 - 423186 + | phospholipase D/transphosphatidylase Caul_0384 424584 - 423916 - | methionine biosynthesis protein MetW Caul_0385 425801 - 424650 - | homoserine O-acetyltransferase Caul_0386 425879 - 426391 + | putative phosphohistidine phosphatase, SixA Caul_0387 426388 - 426732 + | hypothetical protein Caul_0388 426729 - 427793 + | dihydroorotate dehydrogenase 2 Caul_0389 427790 - 428527 + | SNARE associated Golgi protein Caul_0390 428537 - 430045 + | integral membrane sensor signal transduction histidine kinase TERM 319 430096 - 430056 - T 100 -17 -3.55622 | gap 1, overlap 430060 CTTAACCGCTTCAAA TCAACC-GCTCATCCCGGC GTTC GCCGAGATGAGCGGGTTGC CCTACAGCCCCTTCG TERM 320 430091 - 430060 - T 100 -22.4 -3.51411 | overlap 430056 ACCGCTTCAAATCAA CCGCTCATCCCGGC GTTC GCCGAGATGAGCGG GTTGCCCTACAGCCC Caul_0391 431816 - 430098 - | gamma-glutamyltransferase Caul_0392 432277 - 432585 + | hypothetical protein Caul_0393 432971 - 433300 + | hypothetical protein Caul_0394 433398 - 434720 + | DNA-cytosine methyltransferase TERM 321 435297 - 435284 - g 100 -8.1 -5.57729 | opp_overlap 435283 AAATAAGAGAAAAAA CCTCG TTGG CGAGG GATTTGAAGATGTCC Caul_0395 434724 - 435803 + | hypothetical protein Caul_0396 436316 - 435816 - | hypothetical protein Caul_0397 437443 - 436316 - | hypothetical protein Caul_0398 437644 - 438492 + | cobyrinic acid ac-diamide synthase TERM 322 439230 - 439204 - T 83 -7.3 -4.55118 | gap 1, opp_overlap 439204 439205 439207, overlap 439205 TAAGGCGAGATAAAA GGACA-GGGACC TAGC GGTCCCATGTCA TTGATGGTGCTGGGG Caul_0399 440060 - 439824 - | XRE family transcriptional regulator TERM 323 440081 - 440111 + H 76 -11.2 -3.71378 | opp_overlap 440076 440081 440085 TGCTCCACAAGTGAA CGAATTCCGTTGAC TAA GTCACCGTAATTCG TTTGAATGTAGCCTC Caul_0400 440192 - 440710 + | hypothetical protein Caul_0401 440747 - 440998 + | hypothetical protein Caul_0402 442504 - 440987 - | hypothetical protein Caul_0403 444131 - 442839 - | HipA domain-containing protein Caul_0404 444504 - 444124 - | XRE family transcriptional regulator TERM 324 444621 - 444578 - H 100 -17 -4.38712 | opp_overlap 444578 444600, overlap 444600 444602 CGCATGTCTACAAAA TCCGTAATTCCGGATACGTA AAGA CATATATCCGGAATTACGGA TATGTGTGCTTTGGG TERM 325 444578 - 444621 + H 84 -16.3 -3.08344 | opp_overlap 444578 444600 444602, overlap 444600 CGCATGTCTACAAAA TCCGTAATTCCGGATACGT AAAGAC ATATATCCGGAATTACGGA TATGTGTGCTTTGGG TERM 326 444799 - 444816 + G 78 -6.9 -4.57569 | AGTTCAGCGCTTCTT GGGCCAC GTCC GTGCCCC TTTTTCGCGACGTCG TERM 327 444848 - 444870 + G 81 -9.8 -4.34789 | overlap 444831 GGCTGGTTACTTCCG GCGCATTGTC GGC GTCGATGCGC TTCTTTTCTACGTTG Caul_0405 444627 - 445010 + | hypothetical protein TERM 328 445331 - 445345 + G 75 -10 -3.96148 | opp_overlap 445342 CAGTCCAGTCACACC GCCCTT GAA AAGGGC TTTGTCCTCACCGCA TERM 329 445924 - 445905 - g 72 -3.4 -4.60041 | ATCGAGCCGTAAAAA CGGGCCGC ATTG ACGAGCCG CTGCCGATCGACGCC Caul_0406 445310 - 446287 + | nuclease Caul_0407 447268 - 446357 - | AraC family transcriptional regulator TERM 330 447658 - 447685 + r 86 -17.8 -2.70932 | gap 1, opp_overlap 447647, overlap 447660 CAAATGGGTCGATGC GACGTGGACCGCC GCG GGCGG-CCACGTC TACTTCGCGGCCAAG TERM 331 447660 - 447683 + r 77 -14.6 -2.90075 | gap 1, opp_overlap 447647, overlap 447658 AATGGGTCGATGCGA CGTGGACCGCC GCG GGCGG-CCACG TCTACTTCGCGGCCA Caul_0408 448379 - 448173 - | hypothetical protein Caul_0409 448627 - 449271 + | TetR family transcriptional regulator Caul_0410 449396 - 450157 + | MltA-interacting MipA family protein TERM 332 450270 - 450213 - T 87 -17 -2.89177 | gap 1, opp_overlap 450222 450227, overlap 450218 ATCCGAGAGATGACA GCGAACCAGGGCAAGAGGCGGTCGCGC GGCGG GC-CGGCCGCCTCTTGCCTTGCTCCTC CGGCCTGACGGCGAT TERM 333 450265 - 450218 - T 86 -16.3 -3.15708 | gap 1, opp_overlap 450222 450227, overlap 450213 AGAGATGACAGCGAA CCAGGGCAAGAGGCGGTCGCGC GGCGG GC-CGGCCGCCTCTTGCCTTGC TCCTCCGGCCTGACG TERM 334 450222 - 450261 + T 100 -22.3 -3.21218 | gap 1, opp_overlap 450218 450213, overlap 450227 ATGACAGCGAACCAG GGCAAGAGGCGGTCGCGC GGCGG GC-CGGCCGCCTCTTGCC TTGCTCCTCCGGCCT TERM 335 450227 - 450256 + T 76 -13.6 -3.21695 | gap 1, opp_overlap 450218 450213, overlap 450222 AGCGAACCAGGGCAA GAGGCGGTCGCGC GGCGG GC-CGGCCGCCTC TTGCCTTGCTCCTCC Caul_0411 451021 - 450512 - | MerR family transcriptional regulator TERM 336 452799 - 452830 + G 73 -10 -3.95073 | opp_overlap 452799 CGGACGGTGACGAAA TCCTGCTGCGCGCG ACCG CTCGGGCGGCGGGA TTTGTCGATATCGGA Caul_0412 451568 - 452893 + | fumarylacetoacetase TERM 337 453227 - 453213 - g 73 -7 -4.11692 | CACCCAGGCGCAAAA GGCCGC CTG GCTGCC GGGGATGGCGTCGGG Caul_0413 452896 - 454044 + | acyl-CoA dehydrogenase domain-containing protein TERM 338 454142 - 454175 + T 72 -12.3 -3.34398 | opp_overlap 454102 454146, overlap 454140 CTCTTCGGCGACAAA GAAATGGCCGCGACG TCGC CGTCGCGGCCAAGGC TGTTTCCGGGAGGAA TERM 339 454171 - 454146 - T 100 -20.5 -4.55295 | opp_overlap 454142 454140, overlap 454102 TCGGCGACAAAGAAA TGGCCGCGACG TCGC CGTCGCGGCCA AGGCTGTTTCCGGGA TERM 340 454204 - 454192 - T 71 -9.1 -3.72576 | GTTTCCGGGAGGAAA TCGCC TAA GGCGA TGAGAACGATTACAC Caul_0414 454701 - 454321 - | cytochrome c class I Caul_0415 455841 - 454834 - | LacI family transcription regulator Caul_0416 456994 - 455945 - | LacI family transcription regulator TERM 341 457121 - 457085 - R 74 -13 -3.33261 | gap 1, opp_overlap 457085 CCCTAACCGTCAGAA GACG-GCTGACCGCGTC CGTG GACGCGGCCAGATCGCC TTTGCGATCAGTCCA TERM 342 457085 - 457121 + r 73 -10.8 -3.61178 | gap 1, opp_overlap 457085 CCCTAACCGTCAGAA GACGG-CTGACCGCGTC CGTG GACGCGGCCAGATCGCC TTTGCGATCAGTCCA Caul_0417 457911 - 457129 - | cyclase family protein Caul_0418 458879 - 457914 - | fumarylacetoacetate (FAA) hydrolase Caul_0419 460620 - 458929 - | glucose-methanol-choline oxidoreductase Caul_0420 461195 - 460617 - | hypothetical protein Caul_0421 461512 - 461892 + | hypothetical protein Caul_0422 461924 - 462925 + | xylose isomerase domain-containing protein TERM 343 462984 - 462952 - f 80 -14.8 -3.21099 | gap 1, opp_overlap 462951, overlap 462954 462955 TTCGGCGATCATCAA CAGCCGC-CCGCGCC CCTG GGCGCGGCGCGGGCG AGGGATCTCATGTCA TERM 344 462986 - 462954 - f 76 -14 -3.17051 | opp_overlap 462951, overlap 462952 462955 CGGCGATCATCAACA GCCGCCCGCGCCCC TGGGC GCGGCGCGGGCGAG GGATCTCATGTCAGA TERM 345 462985 - 462955 - f 83 -17.5 -2.50016 | opp_overlap 462951, overlap 462952 462954 GGCGATCATCAACAG CCGCCCGCGCCCC TGGGC GCGGCGCGGGCGA GGGATCTCATGTCAG Caul_0423 462994 - 464523 + | acyl-CoA synthetase Caul_0424 464523 - 465125 + | TetR family transcriptional regulator TERM 346 465143 - 465163 + F 74 -10.3 -3.72073 | overlap 465144 465144 CCAAGCCTTCGCCAT CGCCGGCCG TCT TGGCCGGCC TTCCTTTTCCTAGCT TERM 347 465144 - 465162 + F 72 -13.8 -2.82521 | overlap 465143 465144 CAAGCCTTCGCCATC GCCGGCCG TCT TGGCCGGC CTTCCTTTTCCTAGC TERM 348 465666 - 465622 - g 70 -8.4 -3.92641 | gap 2, overlap 465609 465623 AAGGCCATCGAGAAA GGCGCCGACGGCCTCATCGCCG TCG CGGCGG-GAG-CCGGCGGCCAC GCCGGCACCCTGTCG Caul_0425 465196 - 466197 + | 2-nitropropane dioxygenase NPD TERM 349 466878 - 466823 - g 75 -8.9 -4.2349 | gap 3, opp_overlap 466852 TCGCGATATCGAAAA CACCGGCGCCAAACAGGCGGCCTGG-CG CGC CGACCCGGCC-CA-GTCCGGGGCCGGCG GTTGCATCGCCGACA Caul_0426 466296 - 467444 + | oxidoreductase domain-containing protein Caul_0427 467441 - 468466 + | xylose isomerase domain-containing protein TERM 350 468865 - 468882 + G 74 -12.7 -3.63515 | opp_overlap 468860 GCGGTCAACACCCAT GGCCTGC CGCC GCAGGCC TTGTTGGGCGTGGCC TERM 351 469322 - 469338 + G 73 -12.3 -3.44325 | opp_overlap 469322 469321 TAGTGATTGGCAAAT GCCTTCG CAT CGAAGGC TTCATTGTCGGCAAT Caul_0428 468517 - 469521 + | alcohol dehydrogenase TERM 352 470104 - 470068 - g 80 -16.5 -3.23216 | opp_overlap 470058 CGTGACGAGCACCAA CGCCACCGAGACCGGCG AGC CGGCCGTCTCGGTGTCG ATGGACGGGGTGTTC Caul_0429 469757 - 471973 + | TonB-dependent receptor TERM 353 472030 - 472058 + F 100 -18.1 -5.30155 | overlap 472032 CGGTTGTCCTCCTGC GCCCCGGGCCGAC TTT GTCGGTCCGGGCC TTTTTTCGTTCATCG TERM 354 472032 - 472056 + F 91 -19.3 -2.85121 | overlap 472030 GTTGTCCTCCTGCGC CCCGGGCCGAC TTT GTCGGTCCGGG CCTTTTTTCGTTCAT TERM 355 473336 - 473318 - g 88 -14.6 -3.78934 | GCGCTTTGACAAGAA GGCGACGA TCA TCGTCGCC TCGGTGGTCCAAGCC TERM 356 473824 - 473786 - g 74 -13.6 -3.25719 | GTATGAGACCACCAA GGCGGCCCTGGCCGCGCG CGG CGCGCAGACCGCCCCGCC ATCGACGCCGCGCGC Caul_0430 472374 - 473885 + | major facilitator transporter Caul_0431 473975 - 474955 + | xylose isomerase domain-containing protein Caul_0432 474952 - 475431 + | hypothetical protein Caul_0433 476197 - 475775 - | hypothetical protein Caul_0434 477247 - 476228 - | alcohol dehydrogenase TERM 357 477284 - 477321 + H 95 -20 -3.32844 | overlap 477285 TTATGTATTGCTCTT CCGGAGCACTGATCCG TATATT CGGATCAGTGCTCCGC TTGTCAAGTGGACAC TERM 358 477285 - 477320 + H 100 -23.5 -2.59564 | overlap 477284 TATGTATTGCTCTTC CGGAGCACTGATCCG TATATT CGGATCAGTGCTCCG CTTGTCAAGTGGACA TERM 359 477654 - 477627 - g 80 -17.8 -2.96274 | gap 1, overlap 477622 TCGCGCACAATTACA GCGGCG-CCATCG AGT CGATGGTCGCCGC TATCGCCGACCCGGA Caul_0435 477338 - 477892 + | TetR family transcriptional regulator Caul_0436 479597 - 478305 - | major facilitator transporter Caul_0437 479801 - 481000 + | major facilitator transporter Caul_0438 481038 - 482441 + | aldehyde dehydrogenase Caul_0439 483068 - 482469 - | TetR family transcriptional regulator Caul_0440 483395 - 484222 + | short-chain dehydrogenase/reductase SDR Caul_0441 484381 - 485763 + | carotenoid oxygenase Caul_0442 486704 - 485937 - | enoyl-CoA hydratase/isomerase TERM 360 486535 - 486514 - G 71 -2.1 -4.56597 | overlap 486516 GCGCCGGCGCAAAAA TGCGGGCCC GTGG AGGCCAGGA CGCTGGCATAGACCC Caul_0443 488172 - 486739 - | aldehyde dehydrogenase TERM 361 487239 - 487222 - G 75 -8.3 -4.1552 | CAGGGGGCCAACAAA GGCCTCG CCTT CGGGGCC GACCTTCAGCGCGCC Caul_0444 489545 - 488322 - | iron-containing alcohol dehydrogenase TERM 362 489307 - 489254 - G 82 -15.9 -3.31144 | overlap 489225 489299 CGCCGACCGCGACAA TGGCGTCGATCTTGGCCTCGCGGGC CTGG GCGACCGCGGCCAACACCGACGCCA ACGGCGCGTGGCGTT Caul_0445 490759 - 489542 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 363 490905 - 490889 - R 75 -13.7 -3.03124 | opp_overlap 490889 490887 490887 TTCCACGCCGGAATA GCGTCCG ACG CGGACGC TAGAGCGTCCGCGCG Caul_0446 492047 - 490905 - | acyl-CoA dehydrogenase domain-containing protein TERM 364 491901 - 491915 + g 73 -12.8 -3.53224 | opp_overlap 491900 491897 GCTGACGCAAAGCAT GCCGGC CTG GCCGGC TTTCAGCCAGGCCTC Caul_0447 492590 - 492165 - | dehydratase TERM 365 492559 - 492530 - G 71 -2.6 -4.57569 | TCACGGGGCCAAAAA CCAGATCGGGCG CGACAT CGCCTGGGCCGG ACGGCGGGCCTTGGA Caul_0448 493099 - 492587 - | hypothetical protein TERM 366 493116 - 493136 + r 71 -9 -3.81414 | gap 1, overlap 493116 CCTTGCTCCCCCGAC GG-CGCGCT GACG AGCGCGGCC TTCTTGCTTGCCGAT Caul_0449 494118 - 493165 - | LysR family transcriptional regulator TERM 367 493982 - 494015 + g 85 -10.9 -4.2558 | opp_overlap 493980 GTTCGCTCGAAGATG GCGTATCCGACCTCG CGCT CCAGGTCGGCGACGC TTTTGGTCACCGCTG Caul_0450 494265 - 495455 + | lipid-transfer protein Caul_0451 495753 - 495433 - | hypothetical protein Caul_0452 496760 - 495900 - | integrase catalytic region TERM 368 496198 - 496208 + g 75 -4.6 -4.56775 | opp_overlap 496196 GAATGATGAATAAGG CCTG GCG CGGG TTTTTGGCGCGCGAT TERM 369 496767 - 496789 + r 91 -3.3 -5.45726 | gap 1 GAACTTCATCGGGAG GCCGCTC-CG AAGA TGAGCGCGGC TTTTTTTAGGATGTC Caul_0453 497071 - 496757 - | transposase IS3/IS911 family protein TERM 370 496920 - 496868 - G 100 -25.6 -2.8547 | gap 1, opp_overlap 496870 496894 AGCGGCCAGATCAGA CGGCGACGGGGCCGGCGCTTGCG TGTGGGGG CGCC-GCGCCGGCCCCGTCGCCC GCGTCCCGTATTGGA Caul_0454 497368 - 497099 - | DoxX family protein Caul_0455 497533 - 498465 + | LysR family transcriptional regulator TERM 371 498701 - 498668 - f 100 -9.7 -4.9138 | gap 1 ACCACCTAAATAAAA CACTAGATCGGAGC TGAAGAT GC-CCGATCCAGTG AGCCTGTCTCGGGTC Caul_0456 498687 - 499322 + | flavodoxin/nitric oxide synthase Caul_0457 499355 - 500824 + | aldehyde dehydrogenase TERM 372 500831 - 500858 + F 100 -18.4 -3.70902 | opp_overlap 500827 GCGGAATAGTATCTA GGGCTCGCGCCG TGGT CGGCGCGGGTCC TTTCCATGTCCACCA TERM 373 500874 - 500895 + F 72 -7.3 -4.11394 | TTTCCATGTCCACCA TGTGCCG TTCTGGTC CGGCACA TTTTGAGGATCGAGT TERM 374 502659 - 502634 - g 71 -11.1 -3.6502 | gap 1, opp_overlap 502638 502651 GACGGCTCATCGAAA CCGACG-GCGGC GTG GCCGCGCGTTGG TATCCCAACGCCGCT Caul_0461 502147 - 502932 + | hypothetical protein Caul_0462 503233 - 504057 + | hypothetical protein TERM 375 504934 - 504910 - gf 71 -11.3 -3.494 | CAAGCTGGGACAGAA GCCGATCGCCG TAA CGCCGGTCGGC GAGCTCCTCGTGATG Caul_0463 504029 - 505936 + | hypothetical protein TERM 376 506008 - 505952 - f 73 -11.3 -3.53811 | gap 2, opp_overlap 505958 505959 505961 505970, overlap 505963 GCTACCGCCCGCAAA GCCTTGATATACGGAGAACCGTATAAT TTGAG ATTATACGGTTCTCCGTATG--AAGGT GCTGGGTGCTCGTTG TERM 377 505999 - 505963 - f 93 -21.2 -2.89055 | opp_overlap 505961 505959 505958 505970, overlap 505952 CAAAGCCTTGATATA CGGAGAACCGTATAAT TTGAG ATTATACGGTTCTCCG TATGAAGGTGCTGGG Caul_0464 506087 - 506386 + | helix-turn-helix domain-containing protein TERM 378 506706 - 506742 + G 75 -9.4 -4.15044 | CCCCCTTGACCGGCT GGCCCTGGTCG-GACGGC ACG GCCGTGGCG-CCATGGCC TTTCTTCCCGACACG Caul_0465 506383 - 507642 + | HipA domain-containing protein Caul_0466 508475 - 507786 - | hypothetical protein TERM 379 507881 - 507899 + g 73 -10.2 -3.86015 | CGCCTTCGACGGGAA CGGTGACG ACC CGACACCG TTTGTCGGCCGGATG Caul_0467 509016 - 508468 - | hypothetical protein Caul_0468 509905 - 509033 - | hypothetical protein Caul_0469 510407 - 510655 + | DNA binding domain-containing protein TERM 380 510635 - 510671 + T 71 -11.4 -3.51934 | opp_overlap 510608, overlap 510633 CATGGGATGCGGCCC CGCAGGGCCTGCCGGC GATAG GTCGGGTGACCCTGCG TATTTGTCGACAACC TERM 381 510678 - 510691 + T 74 -2.4 -4.83615 | GACCCTGCGTATTTG TCGA CAACCT TCGA TTTTTGTCGACGATC Caul_0470 511151 - 510750 - | response regulator receiver protein Caul_0471 512206 - 511157 - | signal transduction histidine kinase TERM 382 512341 - 512366 + r 89 -13.3 -4.15044 | gap 1 CGGCTTGGTTGCGGG CGGCC-GGTCGA ACC TCGGCCTGGCCG TTTCTTCGCCGAGAA Caul_0472 513115 - 512513 - | hypothetical protein Caul_0473 514438 - 513311 - | DNA-directed DNA polymerase Caul_0474 516032 - 514704 - | integrase family protein TERM 383 515475 - 515499 + g 70 -3.4 -4.45544 | gap 1 CCGCAGGGTCCGCAT CGCGCCGTTGC CAGC GCT-CGGCCCG TTTTCCTTGGTCAGA TERM 384 515721 - 515748 + g 74 -14 -3.32946 | overlap 515719 515725 CACTGGGGTTTGCAT GGCCGCAGCCGC CGCG GCGGCCTCGGCC TCTTCTCGTTGCAAC Caul_0475 516255 - 516626 + | hypothetical protein Caul_0476 516708 - 517181 + | XRE family transcriptional regulator TERM 385 517204 - 517231 + G 85 -17 -3.21416 | gap 1, overlap 517224 517229 GTTCATATCGACTTC GCG-GCCGGCCCG CGC CGGGTCGGCACGC TTCATCGTCAGGCTC Caul_0477 517174 - 518421 + | HipA domain-containing protein TERM 386 519221 - 519200 - g 72 -13.7 -3.13403 | overlap 519198 CGGCGGTGATGAAGA TCGCCGGCG ACGG CACCGGCGA CACGCGCTGGAAGGT Caul_0478 518674 - 519879 + | hypothetical protein TERM 387 519911 - 519964 + T 100 -22.5 -3.54424 | opp_overlap 519911, overlap 519915 519917 CCGCAGATCCGGAAA TTCGTAGAGCCGTGGAGCCGCAGAC CCTG GTCGGCGGCTCCACGGCTCTGTTCA TTTCCCCAGATCCGC TERM 388 519964 - 519911 - T 100 -18.1 -3.59262 | opp_overlap 519911 519915 519917 CCGCAGATCCGGAAA TTCGTAGAGCCGTGGAGCCGCAGAC CCTG GTCGGCGGCTCCACGGCTCTGTTCA TTTCCCCAGATCCGC TERM 389 519915 - 519960 + T 100 -29.9 -3.51411 | opp_overlap 519911, overlap 519911 519917 AGATCCGGAAATTCG TAGAGCCGTGGAGCCGCAGAC CCTG GTCGGCGGCTCCACGGCTCTG TTCATTTCCCCAGAT TERM 390 519917 - 519958 + T 100 -30.3 -3.33151 | opp_overlap 519911, overlap 519915 519911 ATCCGGAAATTCGTA GAGCCGTGGAGCCGCAGAC CCTG GTCGGCGGCTCCACGGCTC TGTTCATTTCCCCAG Caul_0479 521793 - 520198 - | TRAG family protein Caul_0480 522501 - 522091 - | nuclease TERM 391 522281 - 522265 - G 86 -13.7 -3.86346 | opp_overlap 522275, overlap 522269 GCACCGGCCCACAAA GCGACCG TAG CGGTCGC GATCGACCACGCGGC TERM 392 522377 - 522353 - G 95 -18.5 -3.63627 | GCCTCATAGGCGAAA GGCTCGGCCGG TGT CCGGCCGCGCC GAACCTCCGGCGCAT Caul_0481 522783 - 522511 - | hypothetical protein Caul_0482 523479 - 522844 - | hypothetical protein TERM 393 523405 - 523425 + g 74 -14.7 -3.05384 | opp_overlap 523402 523405 GCCGTCGTAATAGGA TCGCGCGCC GTC GGCGCGTGA TTGCATCACCCGCAC Caul_0483 524753 - 523584 - | DNA binding domain-containing protein Caul_0484 524875 - 527046 + | TonB-dependent receptor Caul_0485 527073 - 528389 + | CitMHS family citrate/H+ symporter Caul_0486 528389 - 529843 + | hypothetical protein TERM 394 529889 - 529901 + G 75 -4.8 -4.58663 | CGGCCCGTTCTGGGT GACG ATCGA CGTC TTTTTCGACGGTCCT Caul_0487 529827 - 530135 + | hypothetical protein TERM 395 530167 - 530211 + T 86 -12 -4.11216 | overlap 530171 CGACCCTGGACCGGG CGCTTGGGCCTTCCGACCGG ATTGG CCGATCGGAAGGCCGCGTCG TTTTCGGCGTCAGCG TERM 396 530171 - 530208 + T 78 -14.2 -3.09004 | gap 1, overlap 530167 CCTGGACCGGGCGCT TG-GGCCTTCCGACCGG ATTGG CCGATCGGAAGGCCGCG TCGTTTTCGGCGTCA TERM 397 530241 - 530260 + T 80 -15 -3.22858 | overlap 530239 530253 530255 GATCGATCTGGTCCT CGTCGGCG ATAA CGCCGACG TCTTGGTGTCGTTGG Caul_0488 531499 - 530393 - | aldo/keto reductase TERM 398 532021 - 532035 + G 74 -12.8 -3.61178 | GCGGCGCGGCTTCGA CGCCGG CAT CCGGCG TTTGCCGTCGCTCGA TERM 399 532313 - 532348 + G 86 -13.3 -3.89346 | gap 1, overlap 532303 532313 GCGATCGCCGGCCTT GGG-GTCGCCTGCGTG ATTGA CACCCAGGCGGCTCCC TTTCTGGCGTCCGGA TERM 400 532313 - 532347 + G 72 -15.7 -2.93393 | overlap 532303 532313 GCGATCGCCGGCCTT GGGGTCGCCTGCGTG ATTGA CACCCAGGCGGCTCC CTTTCTGGCGTCCGG Caul_0489 531596 - 532531 + | LysR family transcriptional regulator Caul_0490 533425 - 532574 - | alpha/beta hydrolase fold Caul_0491 534430 - 533465 - | alpha/beta hydrolase fold TERM 401 533549 - 533567 + g 79 -14.6 -3.29511 | GAGATGATCGCCGGT CGTGGTCG CGC CGACCACG TTGTCAGCCCATCGC TERM 402 534365 - 534345 - G 90 -12.5 -4.42464 | overlap 534348 AATCCGGGAAAGAAA GGAGGCGAC GCC GTCGCCGCC GCCGATCCGGCCGGG TERM 403 534403 - 534348 - G 77 -15.3 -3.18452 | overlap 534345 CCGGGAAAGAAAGGA GGCGACGCCGTCGCCG-CCGCCGATCC GGCC GGGGCGACCGCCAGCG-CGGCGCCGCC GACGAGCATGATCCT Caul_0492 535378 - 534437 - | alpha/beta hydrolase fold TERM 404 535513 - 535546 + G 78 -8.2 -4.30719 | opp_overlap 535506 535527 GCCGCAAATCGACGT TCGATCGCGATG AAGCGCTTGG CATCGCGCTCGA TTTGTTCTGGCGCCA Caul_0493 535452 - 536072 + | TetR family transcriptional regulator TERM 405 536235 - 536208 - T 75 -14 -3.02144 | TCAGCGCCGCCAAGA GCGGGGTGGCGC CGTC GCGCCTACCCGC TGCGACAAGCATATC Caul_0494 537364 - 536249 - | saccharopine dehydrogenase TERM 406 536953 - 536969 + g 72 -5.8 -4.26076 | gap 1, overlap 536945 536953 CGCTGACCAGGCATC GG-CCGG TTGT CCGGGCC TTTTGATCCAGATCG Caul_0495 539204 - 537543 - | AMP-dependent synthetase and ligase Caul_0496 539642 - 541027 + | MmgE/PrpD family protein Caul_0497 541031 - 542179 + | hypothetical protein Caul_0498 542867 - 542172 - | GntR family transcriptional regulator Caul_0499 542985 - 543527 + | hypothetical protein Caul_0500 543655 - 544641 + | alcohol dehydrogenase Caul_0501 544695 - 545447 + | IgiC, putative TERM 407 545647 - 545609 - g 71 -9.7 -3.71848 | gap 1, opp_overlap 545611, overlap 545606 GGCGCTGACCAACAA TCGCAGG-GTCGGC TTTCCCATGCCT GCCGACGCCTGCGA CTGCCACACGCATGT TERM 408 546018 - 545986 - g 70 -15.5 -2.80994 | CGGAAGTTCACGAGA TGCTCGCCACCGCGG AGG CCCAGGCGGCGAGCA AGGGCTGGCACATTC Caul_0502 545511 - 546488 + | amidohydrolase 2 TERM 409 546529 - 546541 + T 74 -9.1 -3.83026 | TCTTGTGGGGCGTCC CGCCA CGC TGGCG TTTCGTCTGACCCCC Caul_0503 547543 - 546743 - | class II aldolase/adducin family protein Caul_0504 547691 - 550024 + | TonB-dependent receptor TERM 410 550037 - 550062 + TF 70 -11.8 -3.1247 | overlap 550051 TGATGTCTTGACCCG GCCTGGCGCC CTCCCC GGCGCCAAGC TTGCCTGTCCCCGGT TERM 411 550068 - 550099 + TF 88 -16.6 -3.38294 | overlap 550051 550066 550064 550069 GGCGCCAAGCTTGCC TGTCCCCGGTTTCG CTCG CGAGACCGGGGACC TCTGTTTATGTCGCG TERM 412 550069 - 550098 + TF 90 -20.1 -2.62495 | overlap 550051 550068 550066 550064 GCGCCAAGCTTGCCT GTCCCCGGTTTCG CTCG CGAGACCGGGGAC CTCTGTTTATGTCGC Caul_0506 552365 - 551433 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Caul_0505 550144 - 551493 + | major facilitator transporter Caul_0507 552524 - 553969 + | isopropylmalate isomerase large subunit Caul_0508 553966 - 554589 + | isopropylmalate isomerase small subunit TERM 413 555018 - 554995 - g 74 -15.2 -3.01791 | AGTTCCTGTCCAAGA TCCGGGCGGC CGTG GCCGCCCGGC GCGATCCCGACCTGC Caul_0509 554586 - 555455 + | carboxyvinyl-carboxyphosphonate phosphorylmutase Caul_0510 556384 - 555434 - | NAD-dependent epimerase/dehydratase TERM 414 555827 - 555797 - G 73 -9.7 -3.87373 | gap 1 CAGATCCGGCAGAAA GACC-CACTGGTGG CCGA CCCCCAGTGTGGCC GGATTGCGGACGACG TERM 415 555970 - 555998 + g 71 -10.1 -3.71848 | overlap 555979 555988 CGGCGCGGCTGATCC GGGCCTCCATCTC CAC GCGAAGGCGGCCC TTCTTCGTGCGCGGA Caul_0511 556475 - 557356 + | LysR family transcriptional regulator TERM 416 557680 - 557700 + T 79 -14 -3.53012 | CACCTCACCCCCGGC GCGCCACC GCTCA GGTGGCGC TTTGCAGAAGGACGC Caul_0512 558617 - 557808 - | short-chain dehydrogenase/reductase SDR Caul_0513 559992 - 559000 - | AraC family transcriptional regulator TERM 417 559119 - 559105 - G 82 -11.4 -4.13767 | opp_overlap 559103 TCTGCGATCGGAAAA GCCGAG ATC CTCGGC GATGTCGTCCATGCT TERM 418 559165 - 559153 - G 72 -3.3 -4.56775 | overlap 559154 ATCCGTCGCCAAAAA CGAGC GCA GCTTG TCTAACCTGTGCTCT Caul_0514 560388 - 561521 + | saccharopine dehydrogenase TERM 419 561545 - 561591 + F 100 -22.2 -2.62184 | opp_overlap 561537 561551, overlap 561547 CGCAACAGCGGCCGC GACGAAGCGCTCGACCCGCGGC CCC GGCGCGGGTCGAGCGCACGGTC TGCTCTCCAGCCAGG TERM 420 561547 - 561589 + F 91 -19 -2.85351 | opp_overlap 561537 561551, overlap 561545 CAACAGCGGCCGCGA CGAAGCGCTCGACCCGCGGC CCC GGCGCGGGTCGAGCGCACGG TCTGCTCTCCAGCCA TERM 421 561585 - 561551 - f 100 -27.2 -3.14211 | opp_overlap 561547 561545, overlap 561537 AGCGGCCGCGACGAA GCGCTCGACCCGCGGC CCC GGCGCGGGTCGAGCGC ACGGTCTGCTCTCCA Caul_0515 561747 - 562778 + | alpha/beta hydrolase fold TERM 422 562810 - 562783 - T 83 -4.6 -5.0538 | overlap 562786 CCGGAGCTTAAAAAA GAAGGGCCGCCC AACC GGACGGCCCAAG GTTGCCCGCCGAAGC TERM 423 562807 - 562786 - T 100 -15.1 -4.63089 | overlap 562783 GAGCTTAAAAAAGAA GGGCCGCCC AACC GGACGGCCC AAGGTTGCCCGCCGA Caul_0516 565193 - 562872 - | TonB-dependent receptor TERM 424 564719 - 564729 + g 82 -8.2 -4.42386 | overlap 564717 TGTAGTTGATCGCGC CGCC CGT GGCG TTTTGTCCATAAAGG Caul_0517 565552 - 566967 + | major facilitator transporter Caul_0518 568362 - 566989 - | L-serine dehydratase 1 TERM 425 567488 - 567462 - G 73 -15.8 -2.53876 | opp_overlap 567460 567486, overlap 567477 TGTCATGGTAACGTA GCACCGCGGGAA CAA TGCCCGCGGCGC CGTTGGTCGGCGCGG TERM 426 567486 - 567526 + g 82 -15.3 -3.47227 | opp_overlap 567462 567477, overlap 567460 GAACAATGCCCGCGG CGCCGTTGGTCGGCGCG GTGACCA CGCGCCCTCCGGCGGCG TTCTCCTCATTGACC Caul_0519 569991 - 568393 - | gamma-glutamyltransferase Caul_0520 570398 - 570000 - | glyoxalase/bleomycin resistance protein/dioxygenase Caul_0521 571180 - 570881 - | chorismate mutase Caul_0522 572048 - 571389 - | TetR family transcriptional regulator TERM 427 572333 - 572276 - R 77 -12.9 -3.55622 | gap 4, overlap 572253 CCGAAGCGCGGTAAA GCTCCGCGCGCGCGCTTGAGCCGTTCAGC CCGT GCTG--CAGATCAAA-GCGCGCGCGG-GC TTGAACGACGTCGGC Caul_0523 572663 - 572256 - | HxlR family transcriptional regulator Caul_0524 573825 - 572983 - | LysR family transcriptional regulator Caul_0525 573940 - 574950 + | bile acid:sodium symporter Caul_0526 576230 - 575205 - | aldo/keto reductase TERM 428 576745 - 576702 - g 81 -9.6 -4.25104 | opp_overlap 576735 CCTGTCCGAGGAAAA GACCACTGAGCGCGC-CGCC GAACTG GGCGCGGGCGCCCA-CGGTC GTCGATGCGATGTCG Caul_0527 576571 - 577404 + | short-chain dehydrogenase/reductase SDR TERM 429 577429 - 577455 + T 75 -14.5 -2.70932 | overlap 577412 577431 GGGTTGGCTTTGGGA GAGCCATCGTC GTTTA GGCGATGGCTC TCCTTCCGAAAGACC Caul_0528 578306 - 577728 - | TetR family transcriptional regulator Caul_0529 578377 - 579291 + | NmrA family protein TERM 430 579569 - 579589 + F 72 -4 -4.56597 | gap 1 CCCGCCGCGAGATCT GACC-TGCA TCCC TGCGCGGTC TTTTTGGCAGGCGAC TERM 431 579827 - 579804 - g 73 -7.4 -4.11183 | overlap 579809 GCCTATGACAAACAA GCAAAGCCAT GAGG ATGGCGTCGC GTCGAACGCGGAAAT Caul_0530 579781 - 580794 + | NADH:flavin oxidoreductase/NADH oxidase TERM 432 581574 - 581584 + G 75 -6.8 -4.41616 | opp_overlap 581573 TCTGAGGTAGAGCAG CGCA TTT TGCG TTTCTTTGGGGCGAT Caul_0531 581136 - 581792 + | TetR family transcriptional regulator Caul_0532 581863 - 582774 + | hypothetical protein TERM 433 583117 - 583151 + G 74 -14.2 -3.28791 | GTGTGCGGGCACGAT GTGGGGGCCAGGGTGG CGC TCGCCCTGGCCGTCGC TTATCGCGGCGCAGT Caul_0533 582811 - 583665 + | alpha/beta hydrolase fold Caul_0534 583677 - 584687 + | alpha/beta hydrolase fold Caul_0535 584768 - 585301 + | hypothetical protein TERM 434 585283 - 585317 + F 80 -14.3 -3.13522 | gap 1, overlap 585281 TCCAGCCTACCGTAC GCTG-AGCCCGGACGC CTAG GCGTCCCGGCTGCGGC TCTTGGTCGGGCAGT Caul_0536 585396 - 585941 + | hypothetical protein Caul_0537 586827 - 586144 - | glutathione S-transferase domain-containing protein Caul_0538 587876 - 586824 - | aldo/keto reductase TERM 435 587315 - 587270 - G 82 -16.2 -3.26471 | gap 2, opp_overlap 587265 CGACGCCGAGACCAA GT-GCACGCCCGGCCGAG-AGG AGCT CCTGCTCGGCCGTGCGAGCGAC GAGGCTGTGCTCGAC TERM 436 588076 - 588057 - g 72 -4.8 -4.4078 | opp_overlap 588057 588073, overlap 588058 588069 TGTTTCCAAGGAAAA GGCCGCGG AGAA CCGCGTCG CTCTGCTGCGAGCGG TERM 437 588561 - 588549 - g 71 -2.6 -4.56775 | ACGCGCGGTCAAAAA GGCA AACGA CGCC TTGGCGGATGAGGTG Caul_0539 588037 - 588642 + | TetR family transcriptional regulator TERM 438 588659 - 588623 - T 76 -11.3 -3.71649 | overlap 588626 CCCGCAAAGTCGAAA CATCCGGGCGCCGGCGC TAG GCGCGGTCGCCCGCCCG CAGGGCGAAGCTCAG TERM 439 588656 - 588626 - T 71 -13.8 -2.6587 | overlap 588623 GCAAAGTCGAAACAT CCGGGCGCCGGCGC TAG GCGCGGTCGCCCGC CCGCAGGGCGAAGCT Caul_0540 589444 - 588929 - | MarR family transcriptional regulator TERM 440 589591 - 589610 + G 71 -11.4 -3.62096 | CTCTGGCCTGCGATC TGCGGCGC CGCG GCGTCGCA TTTCGACTGATCGAG TERM 441 589666 - 589629 - g 73 -9.8 -3.92869 | overlap 589630 CGACTGATCGAGAAA CTGCCCTCGCCGCTGG TCGGCT CCAAGGGCAAGGGCAT CCAGCCGCGATCCCT TERM 442 590565 - 590549 - g 72 -13.7 -3.14211 | AGGCTGGGTCATCAA GGGCGTC TCC GACGCCC GCCTGCTGGACACTT Caul_0541 589533 - 591071 + | hypothetical protein Caul_0542 591068 - 591742 + | hypothetical protein Caul_0543 592821 - 591892 - | LysR family transcriptional regulator Caul_0544 593036 - 593620 + | putative thermostable hemolysin Caul_0545 593617 - 595071 + | AMP-dependent synthetase and ligase Caul_0546 595083 - 595754 + | hypothetical protein Caul_0547 595744 - 596499 + | short-chain dehydrogenase/reductase SDR TERM 443 597828 - 597814 - g 79 -2.7 -4.83615 | opp_overlap 597826 GATCGGCGAGAAAAA GCCTG ACGTG CCGGC GAAGCTGGACCAAGC Caul_0548 596996 - 598129 + | putative lipoprotein Caul_0549 599392 - 598250 - | monooxygenase FAD-binding TERM 444 598858 - 598868 + g 71 -2.4 -4.56597 | TGTAGTCCGCCTCGG GGCC GAA GACC TTTTTGCGGACCGAC Caul_0550 599423 - 600112 + | TetR family transcriptional regulator TERM 445 601399 - 601415 + T 93 -7.2 -4.98531 | opp_overlap 601385, overlap 601397 AGTCCGGCCTGGTGC CGGTCG GCGGG CGGCCG TTTTTGCTTTCAGCG TERM 446 601488 - 601528 + T 86 -12.8 -4.03586 | opp_overlap 601488, overlap 601521 CATGAGCAGCTAATA TCGTTGTCGCTCACAA TCACCCTAT TTATGAGCGACAACGA TTGTTGTCTTTAAGG TERM 447 601528 - 601488 - T 89 -17.1 -3.11272 | opp_overlap 601488 601521 CATGAGCAGCTAATA TCGTTGTCGCTCACAATCA CCC TATTTATGAGCGACAACGA TTGTTGTCTTTAAGG Caul_0552 602465 - 601605 - | integrase catalytic region TERM 448 601903 - 601913 + g 75 -4.6 -4.56775 | opp_overlap 601901 GAATGATGAATAAGG CCTG GCG CGGG TTTTTGGCGCGCGAT TERM 449 602472 - 602494 + r 91 -3.3 -5.45726 | gap 1 GAACTTCATCGGGAG GCCGCTC-CG AAGA TGAGCGCGGC TTTTTTTAGGATGTC TERM 450 602625 - 602573 - R 100 -25.6 -2.8547 | gap 1, opp_overlap 602575 602592 602599 602600 AGCGGCCAGATCAGA CGGCGACGGGGCCGGCGCTTGCG TGTGGGGG CGCC-GCGCCGGCCCCGTCGCCC GCGTCCCGTATTGGA Caul_0553 603514 - 602786 - | IstB ATP binding domain-containing protein Caul_0554 605006 - 603501 - | integrase catalytic region Caul_0555 606378 - 605239 - | histone deacetylase superfamily protein Caul_0556 607427 - 606741 - | TetR family transcriptional regulator Caul_0557 607542 - 608702 + | amine dehydrogenase Caul_0558 608702 - 609190 + | hypothetical protein Caul_0559 609187 - 609780 + | redoxin domain-containing protein Caul_0560 609777 - 610310 + | amine dehydrogenase Caul_0561 610307 - 610780 + | cytochrome c class I Caul_0562 610777 - 611247 + | cytochrome c, class I Caul_0563 611271 - 613484 + | TonB-dependent receptor Caul_0564 614445 - 613588 - | AraC family transcriptional regulator Caul_0565 615361 - 614633 - | IstB ATP binding domain-containing protein Caul_0566 616853 - 615348 - | integrase catalytic region Caul_0567 617126 - 616905 - | hypothetical protein Caul_0568 618158 - 617676 - | hypothetical protein Caul_0569 618326 - 618418 + | hypothetical protein Caul_0570 619804 - 618488 - | beta-lactamase Caul_0571 621318 - 620098 - | beta-lactamase Caul_0572 623608 - 621332 - | TonB-dependent receptor TERM 451 622000 - 622034 + g 73 -7.7 -4.16016 | CGCTTTGAACCGTTT CCTTGGCCACCGGCG CCGTT TGCAGGGTGCCAAGG TTTATTGCCGCGTCC TERM 452 623685 - 623697 + r 74 -9.1 -3.87815 | GGATCACCCATGGCG CGGTC GAG GACCG TTTCTGCCGCTGGGG Caul_0573 624577 - 623795 - | short-chain dehydrogenase/reductase SDR Caul_0574 624677 - 625582 + | LysR family transcriptional regulator TERM 453 625791 - 625757 - T 75 -13.4 -3.04144 | opp_overlap 625776 GGTCTATCCTTAAGA TCCGAGCCGCCGCAAC GGG GCGGCGCCGGCGCGGA TCGAACACCGGCGAG Caul_0575 626715 - 625900 - | shikimate dehydrogenase substrate binding subunit Caul_0576 628076 - 626940 - | hypothetical protein Caul_0577 629041 - 628301 - | short-chain dehydrogenase/reductase SDR TERM 454 629319 - 629354 + G 77 -15.5 -3.14026 | gap 2, opp_overlap 629283, overlap 629344 GTCCTCCAGGCCGTT G-CCCGCGCGGGCA-GC AGCG GCGTGTCCGCGCGGGAC TTGAGTCTGGATCTC Caul_0578 629193 - 630005 + | IclR family transcriptional regulator Caul_0579 630437 - 632002 + | AMP-dependent synthetase and ligase Caul_0580 633496 - 632054 - | succinic semialdehyde dehydrogenase TERM 455 633302 - 633359 + g 78 -17 -2.70932 | gap 2, overlap 633304 CGAACGCTGCGCCGC GGTGCGGCCGCGCCAGCCGGGCAGCGCG GCAT CG-GCTGCCTGGATGGC-CTGCTGCGTC TCGTTCGCCCCACAA TERM 456 633304 - 633357 + g 75 -16 -2.90075 | gap 2, overlap 633302 AACGCTGCGCCGCGG TGCGGCCGCGCCAGCCGGGCAGCGCG GCAT CG-GCTGCCTGGATGGC-CTGCTGCG TCTCGTTCGCCCCAC Caul_0581 634763 - 633516 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase Caul_0582 636925 - 634781 - | dehydrogenase E1 component Caul_0583 638512 - 637112 - | citrate transporter TERM 457 637877 - 637890 + g 71 -2.3 -4.59853 | GTGGCCCTCGCCATA GCCCT CGTC ACGGC TTTTTGCGCGCTTGC Caul_0584 640257 - 638674 - | carboxylesterase type B TERM 458 639604 - 639624 + g 73 -16.1 -2.57132 | overlap 639588 639606 GGTGACGTTGTTGAT GTCGCCGCC GAA GGCGGCGGC GTTATCGCGAACCCA TERM 459 639606 - 639625 + g 82 -16.4 -3.28791 | overlap 639604 639588 TGACGTTGTTGATGT CGCCGCCG AAGG CGGCGGCG TTATCGCGAACCCAT Caul_0585 641901 - 640273 - | major facilitator transporter Caul_0586 642218 - 641898 - | NIPSNAP family protein TERM 460 642029 - 642045 + g 70 -12.3 -3.28712 | CGGCTCTGCGGCGTT CTCGGTC CTC GACCGAG TTGTAGGCCCACAGG Caul_0587 644257 - 642215 - | dehydrogenase E1 component TERM 461 643937 - 643896 - G 77 -11.4 -3.90112 | gap 1, overlap 643919 TTCTCGCCAATGAAA CGGGTGTGCGGGG-CCATC ATATA GGCGGACCCCGCGCGCCCG CCGTTCAAGCCGGTC Caul_0588 645723 - 644893 - | TetR family transcriptional regulator TERM 462 645284 - 645302 + g 86 -3.8 -5.15969 | opp_overlap 645267 645262, overlap 645264 645282 AGGTGCAGCGCCACC TGATCGTA GGT TTCGGTCA TTTTTTGGGTTCCCC TERM 463 645802 - 645843 + H 86 -8.7 -4.56597 | gap 1, overlap 645807 GACCCGCGGAGGGGC TTGCTCGGGGGATGTCGGCG TAA CGCCTACGTCCCCA-ATCAA TTTTTGGCCCCAGGG Caul_0589 646375 - 647691 + | beta-lactamase TERM 464 647903 - 647872 - f 100 -14.4 -4.25104 | opp_overlap 647874, overlap 647873 647876 CTCTGCCCACCAAAA CTGACCCGGAACGC GCAA GCGTTCCGGGTCTT CTTCATTGTACGGCG TERM 465 647902 - 647873 - f 91 -17.9 -3.14848 | opp_overlap 647874, overlap 647872 647876 TCTGCCCACCAAAAC TGACCCGGAACGC GCAA GCGTTCCGGGTCT TCTTCATTGTACGGC TERM 466 647874 - 647901 + F 100 -21.4 -3.8591 | opp_overlap 647873 647872 647876 CTGCCCACCAAAACT GACCCGGAACGC GCAA GCGTTCCGGGTC TTCTTCATTGTACGG TERM 467 647899 - 647876 - f 86 -18.2 -2.77781 | opp_overlap 647874, overlap 647873 647872 GCCCACCAAAACTGA CCCGGAACGC GCAA GCGTTCCGGG TCTTCTTCATTGTAC Caul_0590 648327 - 649685 + | beta-lactamase TERM 468 649882 - 649866 - f 70 -7.9 -4.09321 | overlap 649867 CAGGGAAGGAAACAA GTCGCGC AGC GCGCGAG GGCTTTGAGGCCTTA TERM 469 650154 - 650178 + G 75 -10.6 -4.09739 | AGGAAGTCGTGGTGA CCGGTTCGCG GATCG CGCGCGCCGG TTTTGACACGCTTGA TERM 470 650594 - 650569 - g 71 -2.4 -4.57073 | overlap 650572 CATCCTGCGCAAAAA GTACGACGGC GCCATG GCCAACGTTC AGGCCGGCGTCACCG Caul_0591 650054 - 653152 + | TonB-dependent receptor TERM 471 653186 - 653157 - f 71 -13.5 -2.53015 | opp_overlap 653159 ACACCTTCTAACCGA TGGGCGCGCCAGA TCTC TCTGGCGCGCCTC TTGACCCGCCGGCCA TERM 472 653159 - 653184 + F 93 -20.5 -3.01712 | opp_overlap 653157 ACCTTCTAACCGATG GGCGCGCCAGA TCTC TCTGGCGCGCC TCTTGACCCGCCGGC Caul_0592 653273 - 654202 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 473 655196 - 655227 + G 75 -5 -4.59853 | gap 1, overlap 655197 TGTTCGGGCCATCGT CGGCGGGCCCCGC ACGCGCG GCG-GGCGCGCCA TTTTTCCCGGCTTCG Caul_0593 654195 - 655853 + | feruloyl esterase Caul_0594 656380 - 656144 - | transposase, IS4 Caul_0595 656533 - 657108 + | protein tyrosine phosphatase-like protein Caul_0596 658665 - 657118 - | integrase family protein Caul_0597 659079 - 659387 + | hypothetical protein Caul_0598 660200 - 661522 + | DNA-cytosine methyltransferase TERM 474 662099 - 662086 - g 100 -8.1 -5.57729 | opp_overlap 662085 AAATAAGAGAAAAAA CCTCG TTGG CGAGG GATTTGAAGATGTCC Caul_0599 661526 - 662605 + | hypothetical protein Caul_0600 663118 - 662618 - | hypothetical protein Caul_0601 664245 - 663118 - | hypothetical protein Caul_0602 664446 - 665294 + | cobyrinic acid ac-diamide synthase TERM 475 666032 - 666006 - T 83 -7.3 -4.55118 | gap 1, opp_overlap 666006 666007 666009, overlap 666007 TAAGGCGAGATAAAA GGACA-GGGACC TAGC GGTCCCATGTCA TTGATGGTGCTGGGG Caul_0603 666862 - 666626 - | XRE family transcriptional regulator TERM 476 666883 - 666913 + H 76 -11.2 -3.71378 | opp_overlap 666878 666883 666887 TGCTCCACAAGTGAA CGAATTCCGTTGAC TAA GTCACCGTAATTCG TTTGAATGTAGCCTC Caul_0604 666994 - 667512 + | hypothetical protein Caul_0605 667549 - 667800 + | hypothetical protein Caul_0606 669306 - 667789 - | hypothetical protein TERM 477 669516 - 669546 + r 74 -10.5 -3.73072 | opp_overlap 669493 GGCGAGGCGAGGCCT CCCCCGACTAG CGATGCGTT TTAGTCGGGGG TTTAGTCAGGGGATT Caul_0607 670762 - 670289 - | resolvase domain-containing protein Caul_0608 671152 - 672333 + | two component transcriptional regulator Caul_0609 672419 - 672799 + | hypothetical protein Caul_0610 673277 - 673603 + | sulfate transporter/antisigma-factor antagonist STAS Caul_0611 673600 - 673965 + | response regulator receiver protein Caul_0612 673962 - 675920 + | CheA signal transduction histidine kinase Caul_0613 675920 - 676447 + | CheW protein Caul_0614 676464 - 678146 + | methyl-accepting chemotaxis sensory transducer TERM 478 678930 - 678908 - g 72 -14.2 -3.21099 | CGTGGTCACCAGCAA CGACGAGATC AAG GACCTCGTCG ACATCGTCAACCGGA Caul_0615 678195 - 679994 + | methyl-accepting chemotaxis sensory transducer Caul_0616 679994 - 680485 + | CheW protein Caul_0617 680528 - 681385 + | MCP methyltransferase, CheR-type Caul_0618 681390 - 682505 + | response regulator receiver modulated CheB methylesterase Caul_0619 684327 - 682588 - | hypothetical protein TERM 479 682871 - 682901 + g 78 -13.3 -3.53811 | gap 1 ATGTCGACCACCTCG GCGCCCTGG-CGAG CGGC CTCGGCCAGGTCGC TTTCCGCGCCGTCGC Caul_0620 686313 - 684376 - | PAS/PAC sensor hybrid histidine kinase TERM 480 685869 - 685879 + g 78 -6.8 -4.59773 | opp_overlap 685864 CGAGGACATAGCGGC CGTC CCC GACG TTTTTCACCGTCAGC Caul_0621 687159 - 686521 - | two component LuxR family transcriptional regulator Caul_0622 690202 - 687161 - | histidine kinase TERM 481 688943 - 688973 + g 93 -13.2 -4.18018 | overlap 688946 CGGGGAAACCCCGCG CGGCCTGGCGCCCT CCA AGGGAGCCAGGGTG TTTTCCGTGCCGAGC TERM 482 688946 - 688970 + g 70 -15.7 -2.81208 | overlap 688943 GGAAACCCCGCGCGG CCTGGCGCCCT CCA AGGGAGCCAGG GTGTTTTCCGTGCCG Caul_0623 690364 - 690717 + | hypothetical protein Caul_0624 690822 - 691721 + | AraC family transcriptional regulator Caul_0625 692747 - 691725 - | gluconolactonase TERM 483 693101 - 693111 + r 73 -8.2 -4.08064 | opp_overlap 693095 693092 693090, overlap 693095 CGAAGACGAGCGCTC CGCG CGG CGCG TTTTCCAGAAGCCTT TERM 484 693648 - 693668 + r 93 -16.9 -3.53012 | CGAGCGCGGGTCCCT CCCTCTCCC CCC GGGAGAGGG TTTCAGAACGCGCCA Caul_0626 694781 - 693630 - | L-carnitine dehydratase/bile acid-inducible protein F Caul_0627 695941 - 694778 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 485 696012 - 696028 + H 71 -11.5 -3.51924 | overlap 695995 CGACGTTGGGGAAGG GCGCCTG TTT CGGGCGC TTGTCTAGGTGGGGC TERM 486 696507 - 696545 + G 75 -5.1 -4.56597 | gap 1, opp_overlap 696503 696505 ACGGTGACCAACACC GGGGCCG-AGCCGATGCC GGCG GGCCTGGGCTTCCACCCC TTTTTCCCGGCCCGC Caul_0628 696090 - 696938 + | aldose 1-epimerase Caul_0629 697816 - 697169 - | transcriptional regulator FixK Caul_0630 698566 - 697952 - | response regulator FixJ Caul_0631 700064 - 698559 - | multi-sensor signal transduction histidine kinase Caul_0632 701783 - 700071 - | ABC transporter related TERM 487 701687 - 701738 + g 85 -16.6 -3.62096 | gap 3, overlap 701701 GCAGCACCGAGGCGG CGCCGACGACGGCGGCCGAGACGGC GGCCA GCCG-CA-GGCCGCCGGCGT-GGCG TTTCCGCTGCTCGCG TERM 488 701701 - 701737 + g 78 -17.1 -2.77043 | overlap 701687 GCGCCGACGACGGCG GCCGAGACGGCGGCCAG CCG CAGGCCGCCGGCGTGGC GTTTCCGCTGCTCGC Caul_0633 703423 - 701780 - | cysteine ABC transporter permease/ATP-binding protein TERM 489 703837 - 703858 + G 71 -9.5 -3.71848 | gap 1, overlap 703844 CTTCGGCGCGCCCCT GGCCATCGAG GGC CT-GATGGCC TTCTTCCTCGAAGCC Caul_0634 703547 - 705127 + | cytochrome bd ubiquinol oxidase subunit I Caul_0635 705140 - 706285 + | cytochrome d ubiquinol oxidase, subunit II Caul_0636 706298 - 706420 + | cyd operon protein YbgT TERM 490 706702 - 706725 + F 72 -4.4 -4.58395 | opp_overlap 706700 706704, overlap 706682 706704 GTTCGACGCGAAACC GACTTTCGGC CTTC GCCGGACGCC TTTTTCGAGCCTCGG Caul_0637 706750 - 707202 + | CheW protein TERM 491 707256 - 707223 - T 100 -19.7 -3.41013 | opp_overlap 707229, overlap 707229 CAACTAGAGCGATAA CGAAAAGGGCGGACC ATCA GGTCCGCCCTTTTTG ATTCCAACCCCGCCG TERM 492 707229 - 707250 + T 100 -17.3 -4.8622 | opp_overlap 707223 707229 GAGCGATAACGAAAA GGGCGGACC ATCA GGTCCGCCC TTTTTGATTCCAACC TERM 493 707250 - 707229 - T 100 -17.3 -4.50058 | opp_overlap 707229, overlap 707223 GAGCGATAACGAAAA GGGCGGACC ATCA GGTCCGCCC TTTTTGATTCCAACC Caul_0638 707923 - 707426 - | hypothetical protein Caul_0639 708808 - 708164 - | GTPase EngB Caul_0640 710700 - 708808 - | putative inner membrane protein translocase component YidC TERM 494 710653 - 710677 + g 82 -3.4 -5.08601 | GATCAGGATCGCGAA CGCGCAGACG AGGAA CATCAGCGTG TTTTTGTTGGAGTCG Caul_0641 711154 - 710708 - | ribonuclease P protein component TERM 495 711162 - 711210 + r 73 -12.5 -3.11459 | gap 2, opp_overlap 711162 TGGGTCATGAAAAAA GCCGCCCTTTC--CGGCGCAGGC GCGGA GCCTGGTTCGAGGAAAGGGCGGC TTCCATCATGGTCTT TERM 496 711210 - 711162 - R 100 -10.3 -5.14563 | gap 2, opp_overlap 711162 TGGGTCATGAAAAAA GCCGCCCTTTC--CGGCGCAGGC GCGGA GCCTGGTTCGAGGAAAGGGCGGC TTCCATCATGGTCTT Caul_0642 711405 - 711271 - | ribosomal protein L34 Caul_0643 711588 - 712130 + | hypothetical protein Caul_0644 713122 - 712127 - | alcohol dehydrogenase Caul_0645 714316 - 713267 - | alpha/beta hydrolase domain-containing protein Caul_0646 715075 - 714434 - | TetR family transcriptional regulator Caul_0647 716665 - 715283 - | flavin-containing monooxygenase FMO Caul_0648 717064 - 716756 - | hypothetical protein Caul_0649 718139 - 717234 - | LysR family transcriptional regulator Caul_0650 718229 - 719242 + | NAD-dependent epimerase/dehydratase TERM 497 719337 - 719357 + T 100 -16.9 -4.25104 | TTCGCCTGGGCCCCT CCCTCTCCC CCT GGGAGAGGG TTTTGGTGAAGCCGC Caul_0651 720131 - 719373 - | hypothetical protein TERM 498 720235 - 720285 + H 70 -9.9 -3.55761 | gap 1, overlap 720237 TGTCTTTGGGCTGGC CATACGGCGTTGCCGTATTTCAAT CTTG ATTTGA-TGCGGCATTGCCGTATG TTTGGAGGCTAGATG TERM 499 720237 - 720251 + H 74 -10 -3.79505 | overlap 720235 TCTTTGGGCTGGCCA TACGGC GTT GCCGTA TTTCAATCTTGATTT Caul_0652 720298 - 720666 + | RelE-like cytotoxic translational repressor of toxin-antitoxin stability system Caul_0653 720671 - 720970 + | XRE family transcriptional regulator Caul_0654 722406 - 721018 - | L-serine dehydratase 1 TERM 500 722538 - 722482 - R 86 -16.3 -3.23274 | opp_overlap 722489, overlap 722460 722477 TCCCGGACAAGCGAA GCGCCGATCCGGGACCGCCGGAAGCGC GGC GCTCAGACGTCGGTCCCGGATCTTCGC GCTGCGCGCTCGTCC TERM 501 722489 - 722531 + r 71 -13.2 -3.04144 | opp_overlap 722460 722477 722482 CAAGCGAAGCGCCGA TCCGGGACCGCCGGAAGCGC GGC GCTCAGACGTCGGTCCCGGA TCTTCGCGCTGCGCG Caul_0655 724228 - 722576 - | peptidase M28 TERM 502 723413 - 723428 + g 78 -6.8 -4.57569 | gap 1, opp_overlap 723380, overlap 723369 723415 CACCGGCTTGAAGTC GC-GGCC CTG GGCCTGC TTTTTCAGGAGGTCG TERM 503 723619 - 723646 + g 70 -12.7 -3.25729 | gap 1, opp_overlap 723593, overlap 723610 TCTCGTGGACGATCA GCACGCCCGCCG CGCCC TGGCGGGCG-GC TTCCTCGTACTTGTA Caul_0656 725391 - 724414 - | pyridoxal-5'-phosphate-dependent protein beta subunit TERM 504 725518 - 725565 + G 73 -9.6 -3.88787 | gap 1 CTGTTCGCCGCCGCG GCCTGCGCC-GCCGTGGCCGTCG CCG CGCCCGCCTTGGCCGGCGAAGCC TTTGTCGGCGTCTAC Caul_0657 725491 - 726099 + | hypothetical protein TERM 505 726667 - 726636 - g 76 -13.7 -3.44051 | gap 1 GGCCTACGAGGACAA GGTCGGCCGCCGCG CCATC CGCGTCG-CCGACC TGGCCGATCCCGAAG Caul_0658 726220 - 727506 + | adenylosuccinate synthetase TERM 506 727558 - 727589 + F 93 -14.4 -4.08767 | gap 1, opp_overlap 727548 727547, overlap 727558 TAAACGCTTCGTGAA C-CCGCCGCGCCTAG AAG CTGGGCGCGACGGCG TTTTCACGGAGTACG TERM 507 727558 - 727588 + F 78 -14.6 -3.05046 | opp_overlap 727548 727547, overlap 727558 TAAACGCTTCGTGAA CCCGCCGCGCCTAG AAG CTGGGCGCGACGGC GTTTTCACGGAGTAC Caul_0659 727609 - 729321 + | integral membrane sensor hybrid histidine kinase TERM 508 729948 - 729994 + G 77 -14.8 -3.21276 | overlap 729947 GGCCTATCGCGACGC GGGCCGGGTCGTGGCTGGCGCC CAT GCCGCCCGCCTGGTCGCGGCCC TGTTGTCGACCGACG Caul_0660 729346 - 730521 + | hypothetical protein Caul_0661 730611 - 731405 + | response regulator receiver protein TERM 509 731461 - 731436 - T 100 -18.3 -4.30978 | opp_overlap 731429 TCCAATCCATGAAAA CGCCCCGGACC TTGC GATCCGGGGCG GCTCCAGTCTCTCAG Caul_0662 732376 - 731489 - | RNA polymerase factor sigma-32 Caul_0663 732648 - 732367 - | hypothetical protein Caul_0664 732683 - 733039 + | membrane protein of unknown function Caul_0665 733803 - 733069 - | tetratricopeptide TPR_4 Caul_0666 734499 - 733873 - | peptidyl-tRNA hydrolase TERM 510 734591 - 734623 + r 74 -10.5 -3.72695 | opp_overlap 734556 734555, overlap 734556 GAGGCCGCATTCGAG GCCCTCATCCCGAGA TTG TCGAAGGATGAGGGC TTTCGTGGCGAGGCT TERM 511 734655 - 734678 + r 91 -16.7 -3.61178 | opp_overlap 734655 CAGCCAAACGAAAAA CGGGCGGGC CGTGAA GCCCGCCCG TTTCAGGTAACTCGG TERM 512 734678 - 734655 - R 100 -17.4 -5.00138 | opp_overlap 734655 CAGCCAAACGAAAAA CGGGCGGGCC GTGA AGCCCGCCCG TTTCAGGTAACTCGG Caul_0667 735316 - 734717 - | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 513 735360 - 735395 + r 76 -6 -4.66163 | gap 1, opp_overlap 735352 735359 735360 CTCGAAATGCGAAAC CGCCGCACAGGACTGGA TTG TCCCGCCCGGT-CGGTG TTTTTGGGTCGCGCT TERM 514 735448 - 735423 - R 100 -19 -3.64198 | overlap 735439 GCTCCATACACAGAA CGGCCGCCCG ATGCAA CGGGCGGCCG CCTGAGGTGCGTCGA Caul_0668 736006 - 735503 - | transposase and inactivated derivatives-like protein Caul_0669 736448 - 736068 - | putative transposase of insertion sequence ISRm2011-2, orfA protein Caul_0670 737636 - 736536 - | hypothetical protein TERM 515 737000 - 737041 + g 87 -19.5 -3.05844 | gap 1, opp_overlap 736984 CCTGCTGCAGGGCCG CCATGTCGGCGCTGTC-GGC CAG GCCGGGCGTCGCCGACATGG TCTTGGCGTAGGCCA Caul_0671 738720 - 737782 - | ribose-phosphate pyrophosphokinase Caul_0672 739607 - 738822 - | hypothetical protein TERM 516 738941 - 738900 - G 72 -8.6 -4.07568 | opp_overlap 738903, overlap 738903 TCGGCGGTTGGAAAA GAACAGGTCCGCCTCGGC GCGGGT GTCGCGGCCGACCCATTC GCTGGCGCCCACGCC Caul_0673 740812 - 739604 - | hypothetical protein TERM 517 740515 - 740489 - G 70 -8.7 -3.85698 | gap 1 GGCGGCGTTCAGAAA CT-CGGGCAGCA GCCG CGCCGCCCGCAG GACGTCGGAGATCAG Caul_0674 741707 - 740799 - | prolipoprotein diacylglyceryl transferase Caul_0675 741823 - 742089 + | hypothetical protein Caul_0676 742216 - 742722 + | hypothetical protein TERM 518 742754 - 742730 - f 78 -10 -3.99678 | overlap 742731 742753 ACGCTTAGAATCAAA CCCTTCTCCC CTTGT GGGAGAAGGT GTCAGCGAAGCTGAC TERM 519 742753 - 742731 - f 75 -13.5 -2.99325 | overlap 742730 CGCTTAGAATCAAAC CCTTCTCCC CTTGT GGGAGAAGG TGTCAGCGAAGCTGA Caul_0677 742905 - 743687 + | pyrroline-5-carboxylate reductase TERM 520 743695 - 743715 + F 81 -13.3 -3.81146 | opp_overlap 743694 743693 743689 GCGGATAGAGGAAGG CCTTCTCCC CAC GGGAGAGGG TTCTTGCTTCGCGAC Caul_0678 743719 - 744297 + | TetR family transcriptional regulator TERM 521 744357 - 744319 - T 100 -22.7 -3.53012 | gap 1, opp_overlap 744325, overlap 744325 CGCTTCCGCCGCAAA GAAA-AAGCCCGCCGGGA TCAC TCCCGGCGGGCTTCTTTC GTCAGGCTGCGCGCC TERM 522 744325 - 744350 + T 100 -21.9 -4.0031 | opp_overlap 744319 744325 CGCCGCAAAGAAAAA GCCCGCCGGGA TCAC TCCCGGCGGGC TTCTTTCGTCAGGCT TERM 523 744350 - 744325 - T 100 -21.9 -5.27335 | opp_overlap 744325, overlap 744319 CGCCGCAAAGAAAAA GCCCGCCGGGA TCAC TCCCGGCGGGC TTCTTTCGTCAGGCT Caul_0679 745716 - 744376 - | hypothetical protein TERM 524 745257 - 745279 + g 82 -16.2 -3.39327 | opp_overlap 745246 AATAGGCGTTCTTGG CGCCGGCGCC GAT GGCGCGGGCG TTCTGGATGTCGCAG Caul_0680 745862 - 746959 + | beta-lactamase domain-containing protein TERM 525 746995 - 746956 - T 83 -14.2 -3.53012 | opp_overlap 746977, overlap 746959 CCGGGCGGTCGGAAA CTAGGACGGGGACAGGCG CATG CGCCTGTCCCCGATCGAA CCTAGGCCGACAGGC TERM 526 746992 - 746959 - T 90 -18.1 -2.90496 | opp_overlap 746977, overlap 746956 GGCGGTCGGAAACTA GGACGGGGACAGGCG CATG CGCCTGTCCCCGATC GAACCTAGGCCGACA TERM 527 746977 - 747012 + T 71 -5.4 -4.4261 | gap 1, opp_overlap 746959 746956 CGGGGACAGGCGCAT GCGCCTGTC-CCCGA TCGAACC TAGGCCGACAGGCGC TTTTCGTATTCGGCC Caul_0681 747530 - 746997 - | activator of Hsp90 ATPase 1 family protein TERM 528 747062 - 747079 + g 78 -6.9 -4.63218 | opp_overlap 747054, overlap 747065 CCCAGAAGGACGCCG TCTGCGG CTTG CCGCTGA TTTTGTTGACCAGGA Caul_0682 747895 - 747527 - | ArsR family transcriptional regulator TERM 529 747904 - 747887 - G 70 -8.5 -3.92542 | opp_overlap 747887 CTGAGGGGTAAATAA TTCAACC ATGT GGTTGAA TGTGTAGGGCGGCTT Caul_0683 748008 - 748448 + | MarR family transcriptional regulator Caul_0684 748445 - 749215 + | enoyl-CoA hydratase/isomerase Caul_0685 749217 - 749630 + | hypothetical protein Caul_0686 749666 - 750640 + | oxidoreductase TERM 530 750687 - 750717 + G 90 -17.6 -3.48593 | CTTCGCCGCCGTCCT CGGCGGGCTGATCG ACC TGATCGGCCCGCTG TTCTATCCGCACCTG Caul_0687 750637 - 751158 + | hypothetical protein Caul_0688 751155 - 752012 + | short chain dehydrogenase Caul_0689 752417 - 752157 - | TfoX domain-containing protein Caul_0690 752491 - 752970 + | GCN5-related N-acetyltransferase Caul_0691 754406 - 753120 - | major facilitator transporter TERM 531 755006 - 754978 - g 70 -14.5 -2.74012 | CGACGAGCGCAAGCA CGGCCTGGGCCAG GCC CTGGTCGAGGCCG CCTGCGAGGCGGCCG Caul_0692 754673 - 755206 + | GCN5-related N-acetyltransferase Caul_0693 755261 - 755854 + | hypothetical protein Caul_0694 755851 - 756495 + | NUDIX hydrolase Caul_0695 756610 - 757863 + | polynucleotide adenylyltransferase region TERM 532 758260 - 758246 - g 73 -12.8 -3.53012 | TCGGCCTGCTCGAAA CCGGCG AAC CGCCGG AAGCCCTGCAACCGA Caul_0696 758224 - 758919 + | glutamine amidotransferase class-I Caul_0697 758979 - 759626 + | hypothetical protein Caul_0698 760386 - 759631 - | abortive infection protein Caul_0699 761255 - 760383 - | coproporphyrinogen III oxidase Caul_0700 761777 - 761307 - | tRNA/rRNA methyltransferase (SpoU) TERM 533 761916 - 761927 + H 76 -7.2 -4.36914 | GGTCCAGACTGTATG CGCC GACA GGCG TTTTCTCCAGGCCGG TERM 534 762014 - 762047 + G 73 -10.1 -3.84825 | opp_overlap 762015 762033, overlap 762015 TGGGCGCAACAACTG ATCCGGCGCATGGGG AAGA CCCCAGCCGCCGGGA TTTCATCTACATCGC TERM 535 762333 - 762303 - g 75 -9 -4.12902 | gap 1 GAAGGATCCGGAAAA GGACGCCGCCCGG GTGAAG CCGGGCAA-GTCC CAGTGGCTGATCGTC Caul_0701 761974 - 762534 + | ubiquinol-cytochrome c reductase, iron-sulfur subunit TERM 536 763704 - 763720 + G 71 -2.1 -4.59944 | overlap 763688 CTCAGCCGGGTGGCC GCGCTGT ACT ACTTCGC TTTCTTTGTCGTCGT Caul_0702 762540 - 763859 + | cytochrome b/b6 domain-containing protein Caul_0703 763865 - 764719 + | cytochrome c1 TERM 537 764783 - 764760 - T 78 -15.2 -2.7535 | opp_overlap 764760, overlap 764757 GGCCTGAAGAGATCA GGGCTCGGCG GAAA CGCCGGGCCC TTTTTCTTTGGGCGT TERM 538 764760 - 764783 + T 100 -17.4 -5.27938 | opp_overlap 764757 764760 GGCCTGAAGAGATCA GGGCTCGGCG GAAA CGCCGGGCCC TTTTTCTTTGGGCGT Caul_0704 765551 - 764757 - | hypothetical protein TERM 539 765505 - 765471 - G 70 -14.9 -2.70932 | gap 1 GCCGTTCTCGAACCA GCAGGCGGTCTGGCCG GCCA CGGCCGGGCCGCC-GC TCGCCGCCAGCAGGC TERM 540 765647 - 765631 - R 75 -3.6 -4.88067 | overlap 765633 765636 ATTGACTGAGAAAAA CAGCAG CTGGC CTGCGG CGGGCGCGATCCCGC Caul_0705 766350 - 765667 - | dienelactone hydrolase Caul_0706 767036 - 766356 - | dienelactone hydrolase Caul_0707 767598 - 767062 - | hypothetical protein Caul_0708 768703 - 767603 - | translation-associated GTPase Caul_0709 769194 - 768955 - | hypothetical protein Caul_0710 770404 - 769298 - | hypothetical protein TERM 541 769514 - 769541 + g 73 -7.7 -4.16921 | opp_overlap 769525, overlap 769537 GAGGATGACCCTGCC GCCGTTGAAGA GCGCCG TCATCAGCGGC TTTTCCGCCTTGTTC TERM 542 770194 - 770252 + g 81 -18.6 -2.70932 | AGGCTTGCGCGCCCA TGGCCCCGCTGGCGGTCGCGCCCGCGCC GCC GACCTGGGCGCGAACGCCGGCCAGGTCG TGGTTCGGACCGAAC Caul_0711 771501 - 770494 - | cobalt chelatase, pCobS small subunit TERM 543 771539 - 771549 + r 76 -8.2 -4.14392 | GTGGGGGAGGGGAAG GGGC GAG GCCC TTTTCCGGCTTGAAA TERM 544 771605 - 771567 - R 100 -18.3 -4.56597 | gap 1, overlap 771569 771573 TTCCGGCTTGAAAAA TGCAAACGCCCCGGACGT GGAA ACGTCCGGGGCGCTCG-A TCAAGGGTTTGGGGC TERM 545 771604 - 771569 - R 100 -23.4 -2.60032 | overlap 771567 771573 CCGGCTTGAAAAATG CAAACGCCCCGGACGT GGAA ACGTCCGGGGCGCTCG ATCAAGGGTTTGGGG TERM 546 771600 - 771573 - R 100 -22.8 -3.99805 | overlap 771569 771567 CTTGAAAAATGCAAA CGCCCCGGACGT GGAA ACGTCCGGGGCG CTCGATCAAGGGTTT Caul_0712 772031 - 771633 - | putative secreted protein Caul_0713 772252 - 773016 + | phosphoesterase PA-phosphatase related Caul_0714 773680 - 773030 - | heat shock protein DnaJ domain-containing protein TERM 547 773339 - 773385 + g 82 -8.4 -4.49311 | overlap 773299 773299 773340 773343 GGCGGCGGCCTCGCG CGAGCGGCCGTCGGCCTTCATG CTC CAGGTCGGCCGGCCGCCGGTCA TTTTCTCCTGCTCCT Caul_0715 773740 - 774012 + | BolA family protein Caul_0716 774118 - 774546 + | cytidine deaminase Caul_0717 775093 - 774725 - | response regulator receiver protein Caul_0718 776639 - 775353 - | hypothetical protein Caul_0719 776923 - 777285 + | response regulator receiver protein Caul_0720 777436 - 780084 + | multi-sensor hybrid histidine kinase Caul_0721 781272 - 780163 - | 3-dehydroquinate synthase Caul_0722 781865 - 781269 - | shikimate kinase Caul_0723 781987 - 783462 + | hypothetical protein Caul_0724 783488 - 784414 + | integrase family protein TERM 548 784504 - 784447 - f 93 -19.7 -3.05384 | overlap 784452 CCCGGGCGTAGCGAA GCGAAGACCCGGGACCGCCGCAAGCGC ATGC GTTCACGCGTCGGTCCCGGATCTGCGC GCTGCGCGCCGGGAT TERM 549 784499 - 784452 - f 83 -15.4 -3.19192 | overlap 784447 GCGTAGCGAAGCGAA GACCCGGGACCGCCGCAAGCGC ATGC GTTCACGCGTCGGTCCCGGATC TGCGCGCTGCGCGCC Caul_0725 784579 - 784800 + | PhnA protein TERM 550 784852 - 784815 - T 93 -17.7 -3.28712 | opp_overlap 784815 784816, overlap 784795 784816 GGGCTCTCTCCACAA GCGCCGCTCATCCCGGC ATTC GCCGGGATGAGCGGAAA TTAGTTGTCCCCCTC TERM 551 784815 - 784852 + T 85 -15.5 -3.44622 | opp_overlap 784795 784815 784816, overlap 784816 GGGCTCTCTCCACAA GCGCCGCTCATCCCGGC ATTC GCCGGGATGAGCGGAAA TTAGTTGTCCCCCTC TERM 552 784851 - 784816 - T 91 -21.2 -2.57132 | opp_overlap 784815 784816, overlap 784815 GGCTCTCTCCACAAG CGCCGCTCATCCCGGC ATTC GCCGGGATGAGCGGAA ATTAGTTGTCCCCCT TERM 553 784816 - 784851 + T 87 -19 -2.66452 | opp_overlap 784816 784815, overlap 784815 GGCTCTCTCCACAAG CGCCGCTCATCCCGGC ATTC GCCGGGATGAGCGGAA ATTAGTTGTCCCCCT Caul_0726 785332 - 784853 - | 3-demethylubiquinone-9 3-methyltransferase TERM 554 786483 - 786516 + G 71 -10.9 -3.53811 | gap 1, overlap 786484 786494 GCGAGACCCTGCTGC GCGACACC-GGCGTGG CCA CCGCGCCAGGCGTCGA TTTCGACCCGGTCGA Caul_0727 785495 - 786643 + | aminotransferase class I and II Caul_0728 786838 - 787839 + | aldo/keto reductase Caul_0731 789041 - 790090 + | HpcH/HpaI aldolase Caul_0732 790647 - 790234 - | OsmC family protein Caul_0733 791066 - 790842 - | hypothetical protein TERM 555 791199 - 791187 - H 70 -7.7 -4.09685 | overlap 791189 TCCCAGGTTTTAAAA CAGGA CTC TCCTG GGGGTGAATCCCCCG Caul_0734 791326 - 792288 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha Caul_0735 792368 - 792625 + | prevent-host-death family protein Caul_0736 792622 - 793002 + | PilT domain-containing protein TERM 556 793203 - 793248 + G 79 -14.8 -3.35996 | gap 1 GATCGACGCCCGCCT GGTGCACCTGGTCAAGCTGCG CGCCT CGCAGCTGAACCAG-TGCGCC TTCTGCGTGAAGATG Caul_0737 793093 - 793527 + | alkylhydroperoxidase Caul_0738 793799 - 794776 + | 2-nitropropane dioxygenase NPD Caul_0739 794929 - 797136 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Caul_0740 797229 - 797657 + | resolvase domain-containing protein Caul_0741 797823 - 798947 + | NADH:flavin oxidoreductase/NADH oxidase Caul_0742 800064 - 799045 - | threonine aldolase TERM 557 799522 - 799569 + g 78 -14 -3.66178 | gap 1 GATGTCGAAGCCGGC GGCCACGGCGTTGGCCAGG-CGG GCG CCGTCCAGGTGCACGCCGTAGCC TTTGGCCTTGGCCGG Caul_0743 801379 - 800279 - | alcohol dehydrogenase TERM 558 801539 - 801487 - R 82 -14.4 -3.28712 | gap 2, opp_overlap 801487 CTCGTCCTTCGACAA GCTCAGGATGAGGACGAGAGATGCGC CGA GCCCAA-T-TCATCCTCATCCTGAGC TTGTCGAAGGACGCG TERM 559 801487 - 801539 + r 72 -12.2 -3.28712 | gap 2, opp_overlap 801487 CTCGTCCTTCGACAA GCTCAGGATGAGGACGAGAGATGCGC CGA GCCCAA-T-TCATCCTCATCCTGAGC TTGTCGAAGGACGCG Caul_0744 802035 - 801568 - | CheW protein Caul_0745 802266 - 802694 + | hypothetical protein TERM 560 802712 - 802747 + T 100 -19.8 -3.60971 | opp_overlap 802716 802718, overlap 802718 GCTGAGCGCTAGAGA CGAAGACGCCCCGGGT TCGC GCCCGGGGCGTTTTTG TTTGGGCCTTAGGCT TERM 561 802743 - 802716 - T 77 -14.1 -3.322 | opp_overlap 802712 802718, overlap 802718 AGCGCTAGAGACGAA GACGCCCCGGG TTCGCG CCCGGGGCGTT TTTGTTTGGGCCTTA TERM 562 802718 - 802741 + T 100 -17.4 -5.27938 | opp_overlap 802716 802718, overlap 802712 CGCTAGAGACGAAGA CGCCCCGGGT TCGC GCCCGGGGCG TTTTTGTTTGGGCCT TERM 563 802741 - 802718 - T 86 -16.7 -3.22777 | opp_overlap 802718 802712, overlap 802716 CGCTAGAGACGAAGA CGCCCCGGG TTCGCG CCCGGGGCG TTTTTGTTTGGGCCT Caul_0746 803556 - 802756 - | inositol-phosphate phosphatase Caul_0747 803927 - 804319 + | hypothetical protein Caul_0748 804316 - 805182 + | RNA polymerase sigma factor SigJ Caul_0749 805626 - 805207 - | hypothetical protein Caul_0750 806363 - 805704 - | thiamine-phosphate pyrophosphorylase TERM 564 805833 - 805854 + g 74 -13.7 -3.30441 | gap 1, opp_overlap 805824 CAGGAAGTCGGCCCC CGCCGC-GGC CAA GCCGGCGGCG TTGTCGGCGGTGATG Caul_0751 806535 - 806720 + | BFD/(2Fe-2S)-binding domain-containing protein Caul_0752 806864 - 807343 + | bacterioferritin TERM 565 807575 - 807614 + G 73 -16.3 -2.51547 | overlap 807574 807573 CCCGATGACCGCCGG CGCCCAGCTCGCCCTCG GCCTGG CGGTGGCGGGCGGGGCG ATCTTGATCTCGAGC Caul_0753 807477 - 808067 + | TspO and MBR like protein TERM 566 808175 - 808124 - f 100 -18.2 -4.65263 | gap 1, opp_overlap 808122, overlap 808125 808126 ATGTGTTAAAACAAA TGGCTAGAGCGTTTCCCGGCCTGAT GCA ATCCGGTCGGGAAACGCTCTAGG-A TAACGTCGGTTCATC TERM 567 808175 - 808125 - f 95 -19.8 -3.38435 | opp_overlap 808122, overlap 808124 808126 TGTGTTAAAACAAAT GGCTAGAGCGTTTCCCGGCCTGAT GCA ATCCGGTCGGGAAACGCTCTAGGA TAACGTCGGTTCATC TERM 568 808174 - 808126 - f 100 -23.3 -2.62579 | opp_overlap 808122, overlap 808124 808125 GTGTTAAAACAAATG GCTAGAGCGTTTCCCGGCCTGAT GCA ATCCGGTCGGGAAACGCTCTAGG ATAACGTCGGTTCAT TERM 569 808422 - 808448 + G 77 -10.9 -3.90744 | gap 2, opp_overlap 808388 808389 CAAGGCCTGCGCCAA GGC-CGGCGT-GG TCC CCGACGCCGCGCC TTATTTCGCCGCCCG Caul_0754 808249 - 808884 + | hypothetical protein Caul_0755 809370 - 808906 - | DoxX family protein Caul_0756 810146 - 809367 - | hypothetical protein Caul_0757 810973 - 810143 - | hypothetical protein TERM 570 811106 - 811093 - R 74 -2.3 -4.89852 | overlap 811094 811096 811097 GGAGACGGAGAAAAA GGAGG GCGT CGTCC GGGCGGCGGGGGGAT Caul_0758 811440 - 811150 - | hypothetical protein Caul_0759 811666 - 812208 + | ECF subfamily RNA polymerase sigma-24 factor Caul_0760 812189 - 812836 + | hypothetical protein TERM 571 812820 - 812842 + T 71 -11.3 -3.45832 | CGGTGATCGGGAAGT GGGCGCTTA GGTGG TGAGCGCCC TTCCTTCTCCCCTTG Caul_0761 813575 - 813009 - | elongation factor P TERM 572 813685 - 813710 + H 72 -11.9 -3.30124 | overlap 813686 CGTCCCGGAGCCTTT AGCCTCACGTT GGAT AACGTGAGGCG TTCTAAAGGCTCCGA TERM 573 813686 - 813709 + H 77 -15.4 -2.57931 | overlap 813685 GTCCCGGAGCCTTTA GCCTCACGTT GGAT AACGTGAGGC GTTCTAAAGGCTCCG TERM 574 814004 - 814046 + G 85 -11.2 -4.25104 | gap 1, opp_overlap 813965 CGCCGCCCTGACGAT CTCGGGCGAGCGCGCGCCG CTCTAC CTGCACAC-CTCGCCCGAG TTTTCCTGCAAGAAG Caul_0762 813798 - 814847 + | lysine--tRNA ligase TERM 575 815751 - 815794 + G 75 -8.8 -4.10657 | GCCATCTGCGCACCA GC-GTCGAGGACGGCCGCGC CCTGAT GCGCG-CCATCCGCGGCCGC TTTTCGGGCCTGTGC Caul_0763 814898 - 815941 + | lysine 2,3-aminomutase YodO family protein Caul_0764 816400 - 816002 - | AtsE TERM 576 816499 - 816474 - R 100 -18.3 -3.67976 | opp_overlap 816474 CCGAGGAACGCGAAA GGCCTCCCCGG TCGC CCAGGGAGGCC TTGTTTCACGCGAAG TERM 577 816474 - 816499 + r 95 -16.1 -3.90744 | opp_overlap 816474 CCGAGGAACGCGAAA GGCCTCCCCGG TCGC CCAGGGAGGCC TTGTTTCACGCGAAG Caul_0765 817630 - 816539 - | fructose-1,6-bisphosphate aldolase TERM 578 817716 - 817760 + r 71 -10.8 -3.53761 | opp_overlap 817723 817740 817741, overlap 817723 817740 TTTGCCCGGGTCGTG CGTGAAATCCTCGTCCTTCG ACAAG CTCAGGATGAGGATTTCAAG TTTGGCGCCGCGTTC Caul_0766 819029 - 817839 - | phosphoglycerate kinase TERM 579 819203 - 819178 - R 100 -16.9 -4.47217 | opp_overlap 819178 819177 AATCAGCAAGGAAAA CCCCCACCCTT GGGA AAGGGCGGGGG CTTGGTAGGCTTTAC TERM 580 819178 - 819203 + r 74 -14.7 -2.51966 | opp_overlap 819178, overlap 819177 AATCAGCAAGGAAAA CCCCCACCCTT GGGA AAGGGCGGGGG CTTGGTAGGCTTTAC Caul_0767 820222 - 819215 - | glyceraldehyde-3-phosphate dehydrogenase, type I Caul_0768 820389 - 820877 + | hypothetical protein Caul_0769 820881 - 821207 + | hypothetical protein Caul_0770 821267 - 821605 + | hypothetical protein Caul_0771 822753 - 821575 - | GntR family transcriptional regulator TERM 581 821691 - 821705 + g 71 -10 -3.79906 | CCTCGGGCTCCGCCA GGCTGA AGT TCAGCC TTATTGTCGGGCTCG Caul_0772 822827 - 823267 + | MarR family transcriptional regulator Caul_0773 823535 - 823275 - | plasmid stabilization system protein Caul_0774 823856 - 823662 - | CopG/Arc/MetJ family addiction module antidote protein TERM 582 824609 - 824646 + G 73 -12.5 -3.49618 | TGACCGCGCGCTGGA GGCCCTGCGCGCCCGCC GCGA GGTGTTCGTGCTGGGCC TTGGTTATGTGGGCC Caul_0775 824142 - 824753 + | 5-formyltetrahydrofolate cyclo-ligase Caul_0776 824758 - 825579 + | metallophosphoesterase Caul_0777 826369 - 825710 - | peroxidase Caul_0778 826553 - 826966 + | OsmC family protein Caul_0779 827385 - 827083 - | hypothetical protein Caul_0780 827494 - 828249 + | hypothetical protein TERM 583 828291 - 828268 - f 78 -6.7 -4.63218 | overlap 828288 828289 CGGCTTCCAACAAAA GCGGTTGTC ATCCCG GACAAGCGC ACGGCGCGAAGATCC Caul_0781 828484 - 829122 + | hypothetical protein Caul_0782 829190 - 830125 + | inosine/uridine-preferring nucleoside hydrolase Caul_0783 830634 - 830122 - | hypothetical protein TERM 584 830415 - 830362 - G 71 -10.9 -3.54146 | gap 1, overlap 830360 GGCCGGAATGAAATA GGCGGAGAGGCCCAGATTGGCCAACA GGA TGTTGGCCA-CCAGGATCGCCACGCC CTCGCCGCCGCTGGC Caul_0784 830778 - 831287 + | crossover junction endodeoxyribonuclease RuvC Caul_0785 831284 - 831898 + | DNA recombination protein RuvA TERM 585 832182 - 832221 + G 74 -14.2 -3.34398 | gap 1, overlap 832180 CGCATCTTCATCGAG GCGGC-CAAGGGCCGGGGC GAG GCCCTGGACCATGTGCTGC TGTTTGGCCCGCCGG Caul_0786 832044 - 833090 + | Holliday junction DNA helicase B Caul_0787 833140 - 833586 + | tol-pal system-associated acyl-CoA thioesterase Caul_0788 835013 - 833646 - | histidine triad (HIT) protein TERM 586 835747 - 835728 - g 79 -7.8 -4.42238 | GTACGCCAAGGAAAA CGACAAGC TGAA GCTGGTCG GTGGCATCCTGGGTC Caul_0789 835429 - 835947 + | ribosomal protein L10 TERM 587 836098 - 836076 - g 75 -4.6 -4.63218 | overlap 836077 836078 GCTGCTGGAAGAAAA GTGGGGCGTC TCG GCCGCCGCTC CGGTCGCCGCCGCCG Caul_0790 835990 - 836370 + | ribosomal protein L7/L12 TERM 588 836448 - 836475 + F 100 -24.2 -4.87133 | TGACGCTCGAGTTGA CGGCCCCGGAGG GAAA CCTCCGGGGCCG TTTTCTTTGGGCGAT Caul_0791 836613 - 837302 + | ThiJ/PfpI domain-containing protein Caul_0792 838085 - 837411 - | diguanylate phosphodiesterase TERM 589 837951 - 837932 - G 84 -16.4 -3.4252 | overlap 837917 CCTGAGCCAGGACAA GGCCGGCG CCTT CGCCGGCC GCGCCGCGCACCAGG TERM 590 838119 - 838104 - H 83 -4.6 -5.03314 | GTCACCTTCAAAAAA CTGGTC GAAC GCCCAG AATGACGCGATAAGC TERM 591 838293 - 838311 + G 83 -4.5 -4.81551 | GTTTCACATTGCCGT GGCCATC ACCAA GATCGCC TTTTTCGTCTGCCTG Caul_0793 838216 - 838374 + | hypothetical protein TERM 592 839071 - 839061 - g 82 -8.2 -4.49364 | AAACCGAAGAAGAAA CCGG CGC CCGG TCCGTCAAGGACATC Caul_0794 838718 - 842800 + | DNA-directed RNA polymerase subunit beta Caul_0795 842919 - 847103 + | DNA-directed RNA polymerase subunit beta' TERM 593 847160 - 847125 - T 93 -16.3 -3.68351 | gap 2, opp_overlap 847130, overlap 847130 CTTCGAGGACTGAAA CGG--AACGGCCCGGGA GCGA TCCCGGGCCGTTTTCCG TTCCAACCTTCCGCT TERM 594 847130 - 847153 + T 100 -19.6 -4.27316 | opp_overlap 847125 847130 AGGACTGAAACGGAA CGGCCCGGGA GCGA TCCCGGGCCG TTTTCCGTTCCAACC TERM 595 847153 - 847130 - T 95 -19.6 -3.29591 | opp_overlap 847130, overlap 847125 AGGACTGAAACGGAA CGGCCCGGGA GCGA TCCCGGGCCG TTTTCCGTTCCAACC TERM 596 847167 - 847206 + T 100 -17.2 -3.62096 | CGTTTTCCGTTCCAA CCTTCCGCTCATGCCGAC GAAA GTCGGGATGAGCGGAGAG TTTGGGGTGCTACCG Caul_0796 848109 - 847216 - | LysR family transcriptional regulator Caul_0797 848217 - 848834 + | glutathione S-transferase domain-containing protein Caul_0798 848836 - 849759 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Caul_0799 850568 - 849783 - | hypothetical protein Caul_0800 851410 - 850664 - | hypothetical protein TERM 597 851648 - 851616 - H 82 -14.8 -3.36327 | opp_overlap 851617, overlap 851617 TTACCCGACGGATAA GCCCGCCGGAACGC TACCC GCGTCCCGGCGAGT TTCGTGTTTATCAGG TERM 598 851647 - 851617 - H 86 -18.3 -2.61582 | opp_overlap 851617, overlap 851616 TACCCGACGGATAAG CCCGCCGGAACGC TACCC GCGTCCCGGCGAG TTTCGTGTTTATCAG TERM 599 851617 - 851647 + H 90 -13.9 -4.04579 | opp_overlap 851617 851616 TACCCGACGGATAAG CCCGCCGGAACGC TACCC GCGTCCCGGCGAG TTTCGTGTTTATCAG Caul_0801 851757 - 852128 + | 30S ribosomal protein S12 Caul_0802 852141 - 852614 + | 30S ribosomal protein S7 TERM 600 852632 - 852675 + F 100 -18.2 -3.70902 | gap 1, opp_overlap 852661 TTTCTTACCAGCACT CTTTCAGGCGCGGGCGGTTTG AGA TAAACCGCCCGCGCC-GCACG TTTAAATGTCCCCGC Caul_0803 852729 - 854807 + | elongation factor G TERM 601 855107 - 855097 - g 71 -2.4 -4.63218 | overlap 855098 GGCGCCGGAAGAAAA GGCC CGC GGCA TCACGATCAACACCG Caul_0804 854927 - 856117 + | elongation factor Tu TERM 602 856186 - 856150 - f 100 -17.4 -3.65351 | gap 1, opp_overlap 856155, overlap 856155 CTAGGCTGACCTAAA GC-GAAGGCCCCGGAGA GCAA TCTCCGGGGCCTTTTGC TGTCTAAAGCCTGCC TERM 603 856180 - 856155 - f 95 -20.5 -3.29324 | opp_overlap 856155, overlap 856150 CTGACCTAAAGCGAA GGCCCCGGAGA GCAA TCTCCGGGGCC TTTTGCTGTCTAAAG TERM 604 856155 - 856180 + F 100 -20.5 -4.39166 | opp_overlap 856155 856150 CTGACCTAAAGCGAA GGCCCCGGAGA GCAA TCTCCGGGGCC TTTTGCTGTCTAAAG TERM 605 856218 - 856195 - f 71 -11 -3.53012 | gap 1, opp_overlap 856199 CTTTTGCTGTCTAAA GCCTGCCCCCC CAC AGGGGG-AGGC TTGGCTGGCGGGGCG Caul_0805 856298 - 856792 + | hypothetical protein Caul_0806 860053 - 856925 - | acriflavin resistance protein TERM 606 859510 - 859520 + g 75 -8.2 -4.19238 | CGACCCGGGCCACCT GGGC CAC GCCC TTTTCGCCTTGCAGG Caul_0807 861129 - 860053 - | RND family efflux transporter MFP subunit TERM 607 860952 - 860972 + g 76 -13.9 -3.53012 | opp_overlap 860934 GGCCGGACGCCTCGA CCCCGCCGC CCA GCGGCCGGG TTTCGACCGAGCCGA Caul_0808 862634 - 861126 - | RND efflux system outer membrane lipoprotein TERM 608 861420 - 861435 + g 81 -10.4 -4.25104 | CTCGGCTTCGCCATA GGCGGT CTGG ACCGCC TTTTCGTAGGCGACA TERM 609 862652 - 862641 - R 73 -3.6 -4.7497 | opp_overlap 862649 TTCAGTCATCAAAAA CACC TGCA GGCG CGACCGAAGGGGGAG Caul_0809 863145 - 862684 - | MarR family transcriptional regulator Caul_0810 864832 - 863519 - | TetR family transcriptional regulator TERM 610 864123 - 864155 + g 70 -12 -3.35088 | overlap 864113 864123 864125 864151 TCGGGCAGGGGATGC GG-CGCCCAGGGGCCG CCC CGGCCC-TCGGCGTCC TTGCTTCCCGAGTTT TERM 611 864707 - 864725 + g 75 -10.2 -3.96469 | GAGGATCGCGGTCGC GGCGGCGA GTA TCGCCTCC TTCTTCTTCGCGTAT Caul_0811 866994 - 865009 - | PAS/PAC sensor hybrid histidine kinase TERM 612 867107 - 867089 - H 70 -10.2 -3.54382 | overlap 867085 867083 867090 GCCAAGAAACAGCAA GCCGTCCG CGC CGGACGGT CGAAGGAGGGACGTC TERM 613 867106 - 867090 - H 72 -13.7 -2.71906 | overlap 867089 867085 867083 CCAAGAAACAGCAAG CCGTCCG CGC CGGACGG TCGAAGGAGGGACGT Caul_0812 867126 - 868352 + | beta-lactamase TERM 614 868427 - 868477 + F 83 -9.7 -4.36914 | gap 2, opp_overlap 868448, overlap 868431 ACGTGTGGACTCAGC GCTTCCGGCGGTCCCGGATAACGGC TGC GCCGTT-TCCGGGAT-GACAGGTGC TTTTGTGACGCAGGG TERM 615 868431 - 868474 + F 70 -12.4 -3.1733 | gap 1, opp_overlap 868448, overlap 868427 GTGGACTCAGCGCTT CCGGCGGTCCCGGATAACGGC TGC GCCGTT-TCCGGGATGACAGG TGCTTTTGTGACGCA TERM 616 868542 - 868515 - f 83 -12.6 -3.85698 | overlap 868516 GGCGCCCGCGAGAAA GTGGCGCGGGAG AGGG CTCCCGCGCCGA GTGCGCTTCACCTCG TERM 617 868541 - 868516 - f 83 -16.1 -2.91276 | overlap 868515 GCGCCCGCGAGAAAG TGGCGCGGGAG AGGG CTCCCGCGCCG AGTGCGCTTCACCTC TERM 618 869249 - 869202 - g 73 -7.8 -4.23723 | gap 4, overlap 869203 GAACACCATCGAAAA CTCGCCCAAGC-CGGTGATCGCGG CCAT CCACGG-CACCGTGCT-GGGCG-G CGGGCTGGAGGTGGC TERM 619 870034 - 870024 - g 75 -8.2 -4.12188 | GGACGACGTCGAAAA GCGC ATG GCGC TGCTGACGCCCTCGA Caul_0813 868936 - 871014 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding Caul_0814 871141 - 872694 + | AMP-dependent synthetase and ligase Caul_0815 872826 - 873812 + | DegT/DnrJ/EryC1/StrS aminotransferase Caul_0816 874946 - 873927 - | adenosine deaminase TERM 620 875563 - 875583 + H 72 -13.9 -2.80816 | opp_overlap 875553 AAAAGGGGATGGAGC CGCCGGGGC TTC GCCCGGGCG TATCCTCGGTCGCGC Caul_0817 875620 - 876006 + | hypothetical protein TERM 621 876031 - 876067 + T 75 -11.6 -3.54424 | CGCCCGCCGGCTCGG TGGTCCTCGTCCTTCG ACAGG CTCAGGATGAGGACCA TTTCACAGGCTAAGA TERM 622 876122 - 876094 - T 91 -5.2 -5.28561 | opp_overlap 876094, overlap 876095 AAGACATAAGAAAAA CCTCATCCTGAG CCTGT CGAAGGACGAGG TTTTCGCCCCAGCCT Caul_0818 877042 - 876152 - | pirin domain-containing protein TERM 623 877220 - 877187 - R 100 -18.1 -4.54727 | TCTCTCAAACGAAAA CCACCGCGACCGGCC TCTC GGCTGATCGCGGCGG TCGATGTCCATCGAC Caul_0819 877834 - 877292 - | AsnC family transcriptional regulator TERM 624 880146 - 880201 + G 73 -12.4 -3.53012 | gap 1 ACCGTGGCCTCGATC CTGGCCATGGCCGCCCACGTCGACGGC CGG GCCGGCAGCGTGGTCGAC-ATGACCGG TTTGGCCCAGAAGGG Caul_0820 877932 - 881363 + | indolepyruvate ferredoxin oxidoreductase Caul_0821 882701 - 881523 - | hypothetical protein Caul_0822 882870 - 883169 + | hypothetical protein TERM 625 883441 - 883470 + G 70 -8.5 -3.85698 | CTGAAGGCGCGGCTT TGCGTCGAGGGGC GGCG GCTGCTCTACGCA TTTCTCGACAAGCAC Caul_0823 883237 - 884352 + | FAD dependent oxidoreductase TERM 626 884473 - 884518 + G 82 -11.3 -4.16016 | gap 4, overlap 884478 GGCGGGGCTGATCAT GGCGG-C-C-GCCATCGCCGCCG TGGC CGG-GGCGATGGCGGTGTTCGCC TTTCTTAGCCAGTGG TERM 627 884478 - 884510 + G 93 -21.4 -3.15197 | gap 1, overlap 884473 GGCTGATCATGGCGG CCGCCATCGCCGCCG TGGC CGG-GGCGATGGCGG TGTTCGCCTTTCTTA Caul_0824 884411 - 884782 + | hypothetical protein Caul_0825 886105 - 884888 - | glucose sorbosone dehydrogenase TERM 628 886272 - 886286 + H 73 -12.8 -3.14931 | GGTTCCGGATCTTCA CCCGGC CGC GCCGGG TTCGTCCGGGATGAC Caul_0826 886373 - 887425 + | glycosyl transferase group 1 Caul_0827 887755 - 887627 - | hypothetical protein Caul_0828 887961 - 888356 + | DGPFAETKE family protein TERM 629 888391 - 888430 + G 72 -13.4 -3.19449 | gap 1, opp_overlap 888372, overlap 888382 CGCGGCCTGGATCGA CGCGGCC-CTGACCTCGGC CCG GCCGCGGGCGGTGGCGGCG TTGCTGCGCTATTTC Caul_0829 888353 - 889609 + | RNA polymerase ECF-subfamily sigma factor Caul_0830 889890 - 890312 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_0831 890368 - 890895 + | hypothetical protein Caul_0832 891911 - 890916 - | glucokinase TERM 630 891939 - 891952 + H 71 -5.9 -4.3739 | overlap 891931 891949 TGTTCCTCGCGCGGG CCGGT CTGC GCCGG TTTTGTCGAACAGTA Caul_0833 892123 - 892476 + | type IV pilus assembly PilZ TERM 631 892484 - 892527 + T 91 -21 -2.76737 | opp_overlap 892485, overlap 892485 CCAGCTGATCCCAAA ATGCGATCGAGCCCCGGCGA GGGC TCGCCGGGGCTCGAACGGAC ATTTCACGCTTCGTA TERM 632 892526 - 892485 - T 100 -24.5 -4.14243 | opp_overlap 892484 892485 CAGCTGATCCCAAAA TGCGATCGAGCCCCGGCGA GGGC TCGCCGGGGCTCGAACGGA CATTTCACGCTTCGT TERM 633 892485 - 892528 + T 100 -18.3 -3.61764 | gap 2, opp_overlap 892485, overlap 892484 CAGCTGATCCCAAAA TG--CGATCGAGCCCCGGCGA GGGC TCGCCGGGGCTCGAACGGACA TTTCACGCTTCGTAG Caul_0834 892983 - 892546 - | XRE family transcriptional regulator TERM 634 892689 - 892720 + g 83 -12.2 -4.08216 | TCAGGAATTCCTGCA CGATGCGTTCGGCC TGTT GGCCGATCTCGTCG TTTTCCGAGCCGTCC Caul_0835 893278 - 893607 + | hypothetical protein Caul_0836 893697 - 895685 + | methylmalonyl-CoA mutase, large subunit Caul_0837 895750 - 895944 + | hypothetical protein Caul_0838 895941 - 896336 + | PilT domain-containing protein Caul_0839 897225 - 896380 - | hypothetical protein Caul_0840 898116 - 897256 - | integrase catalytic region TERM 635 897554 - 897564 + g 75 -4.6 -4.56775 | opp_overlap 897552 GAATGATGAATAAGG CCTG GCG CGGG TTTTTGGCGCGCGAT TERM 636 898123 - 898145 + r 91 -3.3 -5.45726 | gap 1 GAACTTCATCGGGAG GCCGCTC-CG AAGA TGAGCGCGGC TTTTTTTAGGATGTC Caul_0841 898427 - 898113 - | transposase IS3/IS911 family protein TERM 637 898276 - 898224 - G 100 -25.6 -2.8547 | gap 1, opp_overlap 898226 898250 AGCGGCCAGATCAGA CGGCGACGGGGCCGGCGCTTGCG TGTGGGGG CGCC-GCGCCGGCCCCGTCGCCC GCGTCCCGTATTGGA Caul_0842 898712 - 898455 - | hypothetical protein Caul_0843 899118 - 898834 - | plasmid stabilization system protein TERM 638 899092 - 899136 + g 77 -10.8 -3.86346 | gap 3, opp_overlap 899088 GAGGCGATCAAGCCT GGCGGACGCGGTCCAGCGGAC CTTCAC GTCC-C-GG-CCTCGTCCGCC TTTCTCAGCAGGTCA Caul_0844 899408 - 899115 - | hypothetical protein Caul_0845 899533 - 899823 + | DNA polymerase beta subunit Caul_0846 899816 - 900160 + | hypothetical protein Caul_0847 901533 - 900157 - | major facilitator transporter Caul_0848 901657 - 902409 + | extensin family protein Caul_0849 902901 - 902419 - | activator of Hsp90 ATPase 1 family protein Caul_0850 903451 - 902984 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 639 903525 - 903561 + H 93 -14.3 -4.01939 | ATCCAGGTCAATCCG CGCGGCGCCGGCGCG ACTTGAC CCCGTCTGCGCCGCG TTTCATTGTGCATTC Caul_0851 903606 - 904370 + | short-chain dehydrogenase/reductase SDR TERM 640 906736 - 906767 + G 70 -3.6 -4.46212 | gap 1, overlap 906741 ATCCTGGTGGAGAGC CGCGTGGGCGAGGGT TCG ACCTTCACCC-TGAG TTTTCTGGTCGACGC Caul_0852 904702 - 907281 + | integral membrane sensor hybrid histidine kinase Caul_0853 907333 - 907743 + | hypothetical protein TERM 641 907806 - 907823 + T 93 -14.1 -4.13654 | CCGTTTCCGTGAATG GGGCCGG GAAA CCGGCCC TTTGTCATTTCGGCA Caul_0854 908283 - 907828 - | BadM/Rrf2 family transcriptional regulator Caul_0855 908406 - 909080 + | hypothetical protein Caul_0856 909121 - 910350 + | nitric oxide dioxygenase Caul_0857 911613 - 910462 - | hypothetical protein Caul_0858 911774 - 913372 + | transporter, putative Caul_0859 913372 - 914448 + | secretion protein HlyD family protein Caul_0860 914524 - 914781 + | transglycosylase-associated protein TERM 642 914863 - 914888 + T 100 -19.7 -3.99592 | opp_overlap 914863, overlap 914885 TTCGCCCACGAAAAA GCCCGCCGTCC CTTG GGGCGGCGGGC TTTCTGGTCGTGGCT TERM 643 914888 - 914863 - T 100 -18.3 -4.72272 | gap 1, opp_overlap 914863 914885 TTCGCCCACGAAAAA GCCCGCCGTCCC TTG GGG-CGGCGGGC TTTCTGGTCGTGGCT Caul_0861 916755 - 914923 - | GTP-binding protein TypA TERM 644 916085 - 916102 + g 75 -8.4 -4.18018 | CGGCCGGTCAGCAGG CGACCC AGGAAG GGGTCG TTTTCGATCAGCACG TERM 645 916795 - 916817 + r 78 -10.5 -4.08767 | overlap 916797 916798 ATAAAGGGATTTGAC GCTGTGCGC GTCAG GCGCGCGGC TTTTACGCGACTGCG TERM 646 916895 - 916912 + r 72 -7.7 -4.11751 | opp_overlap 916895 GGTGTCAGCCGCAAA CCCCTTA ATTG TAGGGGG TTTTGGAAAGTTGCT TERM 647 917170 - 917189 + r 100 -15 -5.75342 | opp_overlap 917169 917168, overlap 917145 CCTCCCTAATGAACT GCCCGGCT TTCG AGCCGGGC TTTTTTTTGGCCCGC Caul_0862 918259 - 917300 - | N-formylglutamate amidohydrolase TERM 648 917982 - 917936 - G 80 -17.9 -2.88544 | gap 1, opp_overlap 917955 GTTGAGGTCGATATA GGCCCGGGCCAGGCGCGCGCGG ATCA CCGC-CACGCCCAGGCCGGGCG CGCCGGCGATCAGTT Caul_0863 918438 - 918794 + | response regulator receiver protein TERM 649 919008 - 919024 + G 72 -6.5 -4.36914 | opp_overlap 919008 CATCGCCAGAGACCA CGCCG CGTTCGT CGGCG TTTTGTCGGCGCGCC Caul_0864 918823 - 919098 + | hypothetical protein TERM 650 919358 - 919381 + F 77 -2.3 -4.96848 | CGCGACAAAAGAGGT GGATGTGGC CAATGA GACACACCC TTTTTCTGTCCCGGC Caul_0865 919461 - 920690 + | OmpA/MotB domain-containing protein TERM 651 920741 - 920718 - T 100 -19.6 -3.49475 | opp_overlap 920718 CCGATCCTGAGAGAA GGGTCCGGCC GCAA GGCCGGACCC TTTTTCTTTGCGCGT TERM 652 920718 - 920741 + T 100 -19.6 -5.27938 | opp_overlap 920718 CCGATCCTGAGAGAA GGGTCCGGCC GCAA GGCCGGACCC TTTTTCTTTGCGCGT TERM 653 920799 - 920827 + T 75 -14.5 -2.70932 | opp_overlap 920800 GGACCCATAAAAGAA AGACGCCCCCGAC CGG GTCGGGAGCGTCA TCGTTCCGGAAACCC TERM 654 920826 - 920800 - T 100 -20.2 -4.7878 | opp_overlap 920799 GACCCATAAAAGAAA GACGCCCCCGAC CGG GTCGGGAGCGTC ATCGTTCCGGAAACC Caul_0866 922839 - 921034 - | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC TERM 655 921090 - 921067 - G 76 -7.4 -4.2558 | gap 1 GACGCGCGACGAAAA TCG-CCCGGGT TCG ACCAGGGCCGA CAGGGGGCGGGGCAA TERM 656 921218 - 921170 - G 70 -8.8 -3.91897 | gap 2, overlap 921127 921171 921199 GGCGCCAGGCAGAAA CCGCGGCCGC-CCAGG-CCGCC TAGCACG AACAGTCCCGGCGCGGCCCCGG GAACCGCGCCGGCCA TERM 657 921236 - 921199 - G 72 -14.1 -3.21099 | gap 1, overlap 921170 921171 GCCGCCTAGCACGAA CAGT-CCCGGCGCGGCCC CGG GAACCGCGCCGGCCACCG GCAGGTGGTCGGCGG TERM 658 922914 - 922887 - R 100 -19.2 -3.79882 | opp_overlap 922885 922883, overlap 922890 AGAAGAGCCATGAAA GAAGGGCCGCCC TCGC GGACGGCCCTTC CGGTCTTGTCGAAGC TERM 659 922911 - 922890 - R 95 -15.1 -4.01902 | opp_overlap 922885 922883, overlap 922887 AGAGCCATGAAAGAA GGGCCGCCC TCGC GGACGGCCC TTCCGGTCTTGTCGA Caul_0867 924269 - 923400 - | flagellar motor protein MotA TERM 660 924390 - 924406 + H 71 -11.5 -3.53012 | opp_overlap 924390 TGATCCTGGACTGAA CGGGCCG TCA CGGTCCG TTTCCCCGGCGAAGG TERM 661 924771 - 924741 - g 74 -12.4 -3.53563 | ACACCGCCCTTCAAA CCGTCCTGCCCGCC ATT GGCCGCCAGGTCGG CATTCCCGACGTGCT Caul_0868 924629 - 925957 + | major facilitator transporter TERM 662 925989 - 926003 + T 86 -7 -5.07652 | opp_overlap 925959 ACCTGAGTGCATCAG GCCGGG GCT CCAGGC TTTTGTTTTAACGCA Caul_0869 926418 - 926071 - | hypothetical protein Caul_0870 926699 - 926415 - | hypothetical protein Caul_0871 928042 - 926753 - | lytic murein transglycosylase TERM 663 927125 - 927179 + g 100 -22.1 -3.17075 | gap 2 CAGGATCAGGCCGGC GGGCGAG-GCGGCGTCGGCGGCC-GTC CAG GGCAGGCCGTCGGCGCGGCGCACGCCC TTGGCTTCCCACCAG Caul_0872 928743 - 928099 - | methyltransferase type 12 Caul_0873 928921 - 929046 + | ribosomal protein L36 TERM 664 929141 - 929166 + G 83 -14.7 -3.63627 | opp_overlap 929145 CGCGAAGATCTTCAA GGAACCGGCCG ATCT CGACCGGTTCC TTTCGCGTGTCGGGA Caul_0874 929046 - 929663 + | HAD family hydrolase TERM 665 929804 - 929828 + F 70 -10 -3.55801 | overlap 929785 929805 CGGCCTTCGGCCGCC ACCTTCTCCC GCAGG GGGAGAAGGA TTTCAGGAGCTTCCT TERM 666 929805 - 929827 + F 72 -13.5 -2.73159 | overlap 929804 GGCCTTCGGCCGCCA CCTTCTCCC GCAGG GGGAGAAGG ATTTCAGGAGCTTCC Caul_0875 929845 - 930714 + | 6-phosphogluconate dehydrogenase NAD-binding TERM 667 930738 - 930723 - f 93 -2.5 -5.63517 | gap 1, overlap 930725 GCGCTAAAGAAAAAA GAGCGG GGAAT CCGC-C TTCCACTCCGGGCCT TERM 668 930737 - 930725 - f 74 -6.2 -4.45696 | overlap 930723 GCTAAAGAAAAAAGA GCGG GGAAT CCGC CTTCCACTCCGGGCC Caul_0876 930807 - 931076 + | hypothetical protein Caul_0877 931222 - 931569 + | hypothetical protein TERM 669 931795 - 931778 - f 83 -9.1 -4.36914 | gap 1 TGGCGCCGTAGAAAA CGGCTGCC GCG GGC-GCCG CGATCCCGTGAGCGC Caul_0878 931842 - 932306 + | hypothetical protein Caul_0879 934122 - 932653 - | two component, sigma54 specific, Fis family transcriptional regulator Caul_0880 934683 - 934285 - | hypothetical protein Caul_0881 935178 - 934774 - | hypothetical protein Caul_0882 935323 - 937149 + | pepF/M3 family oligoendopeptidase Caul_0883 937324 - 938691 + | hypothetical protein Caul_0884 938814 - 939674 + | pirin domain-containing protein TERM 670 939759 - 939805 + T 76 -7.3 -4.3208 | CCGCGCTGGCCCAGT CCCCTG-GGTCCCGGATAGCCTC TGC GAGGCT-TCCGGGATGACAACGG TTTTAGGTTGTCGGG Caul_0885 940428 - 939832 - | hypothetical protein Caul_0886 940930 - 940418 - | ECF subfamily RNA polymerase sigma-24 factor Caul_0887 941051 - 941524 + | thioesterase superfamily protein Caul_0888 941528 - 942451 + | alpha/beta hydrolase fold TERM 671 942481 - 942455 - f 72 -13.8 -2.70932 | opp_overlap 942446 942444 GGGTGGGGGTAAGGA TTTCCCTCTCTC TTG GAGAGAGGGAAT CTACGCGGCCGCGAC TERM 672 943102 - 943055 - g 70 -8.2 -3.86015 | CACCGGCTGGACAAA CTGGCGGCCTTCGAGGCCCTGC ACGG GTTGAGCGTCGACAGCCGCGAG CCGACCCTGCTGCTC Caul_0889 942611 - 943645 + | glycosyl transferase family protein TERM 673 943651 - 943678 + F 100 -9.8 -5.26875 | gap 1, overlap 943652 GGCGACTTGAGCCCA AGCCCCGCACGTT GTA AGCG-GCGGGGCG TTTTTTAATTCGACC TERM 674 943652 - 943677 + F 81 -13.3 -3.75402 | gap 1, overlap 943651 GCGACTTGAGCCCAA GCCCCGCACGTT GTA AGCG-GCGGGGC GTTTTTTAATTCGAC Caul_0890 943706 - 943936 + | aa3 type cytochrome c oxidase subunit IV Caul_0891 944063 - 945199 + | NAD(P)(+) transhydrogenase (AB-specific) TERM 675 945245 - 945284 + F 91 -17.2 -3.28712 | AGCTCAGGATGAGGT GTTCAGGGAGAGGGCGGA CCAT TCCGTCCTCATCCTGAGC TTGTCGAAGGACGAG Caul_0892 945331 - 945669 + | NAD(P) transhydrogenase, alpha2 subunit Caul_0893 945666 - 946685 + | hypothetical protein TERM 676 947509 - 947540 + G 70 -9.2 -3.92324 | opp_overlap 947527 947528 GCCTTCGGGCCATCC GCCACGGTTCGGCG TAAA CGCCGCGCCGCCGC TTTCCTCTTCGCCGC Caul_0894 946688 - 947575 + | hypothetical protein Caul_0895 947577 - 948995 + | NAD(P)(+) transhydrogenase (AB-specific) TERM 677 949052 - 949019 - T 100 -16.7 -4.33417 | opp_overlap 949023, overlap 949023 GTCATCGACAAGAAA GCAAGGCCCCGGACG TTTC CGTCCGGGGCCTTTG TTTCGCGATATCAGT TERM 678 949023 - 949048 + T 100 -21.9 -4.43208 | opp_overlap 949019 949023 TCGACAAGAAAGCAA GGCCCCGGACG TTTC CGTCCGGGGCC TTTGTTTCGCGATAT TERM 679 949048 - 949023 - T 100 -21.9 -3.72784 | opp_overlap 949023, overlap 949019 TCGACAAGAAAGCAA GGCCCCGGACG TTTC CGTCCGGGGCC TTTGTTTCGCGATAT Caul_0896 949359 - 949078 - | hypothetical protein TERM 680 949431 - 949470 + H 90 -13.6 -3.96483 | gap 1, overlap 949425 ATTTTCGGCCAACGC GGCGTGGTTCGTG-GCGAT CCA GTCGCTCACCAGCCGCGCC TTGTTTGACTGCGCT TERM 681 949566 - 949603 + G 100 -19.9 -3.52896 | opp_overlap 949572, overlap 949571 949572 TGTCACGCTCAAAAA GGAAAAGGCCCCGGACG TTCC CGTCCGGGGCCATTTGC TTGTCTGGGTCATGC TERM 682 949571 - 949598 + G 100 -18.4 -4.04576 | opp_overlap 949572, overlap 949566 949572 CGCTCAAAAAGGAAA AGGCCCCGGACG TTCC CGTCCGGGGCCA TTTGCTTGTCTGGGT TERM 683 949572 - 949597 + G 91 -21.9 -3.02023 | opp_overlap 949572, overlap 949571 949566 GCTCAAAAAGGAAAA GGCCCCGGACG TTCC CGTCCGGGGCC ATTTGCTTGTCTGGG TERM 684 949597 - 949572 - g 100 -21.9 -4.77757 | opp_overlap 949571 949566 949572 GCTCAAAAAGGAAAA GGCCCCGGACG TTCC CGTCCGGGGCC ATTTGCTTGTCTGGG Caul_0897 949475 - 949996 + | hypothetical protein Caul_0898 950309 - 951103 + | peptidase M23B Caul_0899 951157 - 952119 + | hypothetical protein TERM 685 952303 - 952268 - T 100 -20.6 -4.0371 | opp_overlap 952273, overlap 952273 CACCCGCCAGACAAA GAAAAGCCCGCGTGGA TCGC TCCACGCGGGCTTTTG ACTTTCGCTCGGAAA TERM 686 952273 - 952298 + T 100 -20.5 -4.36595 | opp_overlap 952268 952273 GCCAGACAAAGAAAA GCCCGCGTGGA TCGC TCCACGCGGGC TTTTGACTTTCGCTC TERM 687 952298 - 952273 - T 100 -20.5 -5.05113 | opp_overlap 952273, overlap 952268 GCCAGACAAAGAAAA GCCCGCGTGGA TCGC TCCACGCGGGC TTTTGACTTTCGCTC Caul_0900 952595 - 952326 - | 30S ribosomal protein S21 TERM 688 952665 - 952645 - H 86 -12.6 -3.98009 | ACAAAACCTGATAAA CCCGGAAG GGGGG CTTCCGGG AAACGAGGGGCGGCT Caul_0901 952746 - 953402 + | rpsU-divergently transcribed protein TERM 689 953855 - 953822 - T 70 -10.1 -3.57263 | opp_overlap 953825 ACCTGCACCTGCAAA GGTGTGCCGCCCACC CAAA GGTGAGCGGCCCTTC CTAACTCACCGCGCG TERM 690 953825 - 953852 + T 73 -12.6 -3.18264 | opp_overlap 953822 TGCACCTGCAAAGGT GTGCCGCCCACC CAAA GGTGAGCGGCCC TTCCTAACTCACCGC TERM 691 953981 - 953951 - T 70 -7.4 -4.08394 | overlap 953953 ACATGGCCCGGAAAA GATCGTTAGCCGGT TGA ACCGGCCTTCGAGC AAAGCCCTTGGACGC TERM 692 953981 - 954012 + T 81 -16 -2.71364 | opp_overlap 953985, overlap 953985 GAACCGGCCTTCGAG CAAAGCCCTTGGAC GCAA GTCTGAGGGCTTTG TGCTTCAGAACGTAA TERM 693 953985 - 954008 + T 82 -11 -4.05446 | opp_overlap 953985, overlap 953981 CGGCCTTCGAGCAAA GCCCTTGGAC GCAA GTCTGAGGGC TTTGTGCTTCAGAAC Caul_0902 954829 - 954128 - | aspartate racemase Caul_0903 955991 - 954897 - | phosphoribosylaminoimidazole carboxylase ATPase subunit Caul_0904 956494 - 955991 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit TERM 694 956660 - 956679 + H 71 -13.6 -2.68282 | opp_overlap 956669, overlap 956659 CCCTAGCCGCGACGC GGCGACAC AGGG GTGTCGCC ATTGTCATGGTTAAT Caul_0905 956747 - 957466 + | diguanylate cyclase Caul_0906 957584 - 957961 + | response regulator receiver protein Caul_0907 958037 - 958510 + | OsmC family protein TERM 695 958562 - 958577 + T 74 -6 -4.41047 | overlap 958564 958569 TCTGTTTCCGCTCAT CCCGGC GTTC GCCGAG TTTTGGTTGGCGGAT Caul_0908 958956 - 958735 - | hypothetical protein Caul_0909 959500 - 959039 - | hypothetical protein Caul_0910 960135 - 959524 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Caul_0911 960265 - 960438 + | hypothetical protein TERM 696 960490 - 960539 + T 100 -24.5 -3.45832 | opp_overlap 960497 960501, overlap 960495 960496 960497 960501 CCCACAGAGGCGGCC GAAAATAGAAAGGCCCGCTCCGT TCCG ACGGGGCGGGCCTTTCGCTTTTC TTCCTTCTCCCCTTG TERM 697 960495 - 960534 + T 100 -18.6 -4.81852 | opp_overlap 960497 960501, overlap 960490 960496 960497 960501 AGAGGCGGCCGAAAA TAGAAAGGCCCGCTCCGT TCCG ACGGGGCGGGCCTTTCGC TTTTCTTCCTTCTCC TERM 698 960496 - 960533 + T 100 -22.1 -3.48027 | opp_overlap 960497 960501, overlap 960495 960490 960497 960501 GAGGCGGCCGAAAAT AGAAAGGCCCGCTCCGT TCCG ACGGGGCGGGCCTTTCG CTTTTCTTCCTTCTC TERM 699 960532 - 960497 - T 100 -23.4 -3.63922 | opp_overlap 960496 960495 960490 960497 960501, overlap 960501 AGGCGGCCGAAAATA GAAAGGCCCGCTCCGT TCCG ACGGGGCGGGCCTTTC GCTTTTCTTCCTTCT TERM 700 960497 - 960532 + T 100 -25.6 -2.67732 | opp_overlap 960497 960501, overlap 960496 960495 960490 960501 AGGCGGCCGAAAATA GAAAGGCCCGCTCCGT TCCG ACGGGGCGGGCCTTTC GCTTTTCTTCCTTCT TERM 701 960528 - 960501 - T 100 -18.4 -4.45168 | opp_overlap 960497 960496 960495 960490 960501, overlap 960497 GGCCGAAAATAGAAA GGCCCGCTCCGT TCCG ACGGGGCGGGCC TTTCGCTTTTCTTCC TERM 702 960501 - 960528 + T 100 -20.6 -3.99986 | opp_overlap 960501 960497, overlap 960497 960496 960495 960490 GGCCGAAAATAGAAA GGCCCGCTCCGT TCCG ACGGGGCGGGCC TTTCGCTTTTCTTCC Caul_0912 961415 - 960696 - | hypothetical protein Caul_0913 962539 - 961553 - | PIG3 family NAD(P)H quinone oxidoreductase Caul_0914 962628 - 962834 + | hypothetical protein Caul_0915 962997 - 963503 + | hypothetical protein TERM 703 963566 - 963531 - f 100 -8.3 -5.32699 | gap 1, opp_overlap 963534 TCAAAGATCAAAAAA GCTCGTCATCCCCCGA CGTGT TCGGGGGACC-CAAGC CGAGCTTGCCGCATC Caul_0916 963721 - 964008 + | excinuclease ABC subunit C TERM 704 964221 - 964197 - T 100 -13.6 -5.28983 | gap 1, opp_overlap 964197 CCCAAAACAGAAAAA GCCGG-TCCGC GAAC GCGGAGCCGGC TTTTCGTCGCCTTAC TERM 705 964197 - 964221 + T 100 -13.6 -4.28361 | gap 1, opp_overlap 964197 CCCAAAACAGAAAAA GCCGG-TCCGC GAAC GCGGAGCCGGC TTTTCGTCGCCTTAC Caul_0917 964495 - 964256 - | 50S ribosomal protein L31 Caul_0918 964601 - 966451 + | lipid ABC transporter ATPase/inner membrane protein TERM 706 966479 - 966457 - T 75 -13.5 -2.98823 | opp_overlap 966445 GGCGGCGTAGAGACA CCTTCTCCC GCAAG GGGAGAAGG CAAGGCGTCTTAGCT Caul_0919 966797 - 966489 - | hypothetical protein TERM 707 966975 - 966919 - R 74 -5.1 -4.65895 | gap 3, overlap 966949 CCTGCCACCCAAAAA TCCTGTCA-TCCCGG-TCAA-GCCCGGC GAAA GTCGGGCGCCGATCCGGGACCGCCGGGA GCGCTGAGGTCACGC Caul_0920 967759 - 967052 - | ArsR family transcriptional regulator TERM 708 967121 - 967155 + g 73 -16.5 -2.64616 | gap 2 CAGCGCCTCGCGCCC CGGCGTGGTCAGCCGCG CCG CGCGGCTG-CCG-GCCG TCGTCTCGATCCAGC Caul_0921 967893 - 969260 + | major facilitator transporter TERM 709 969412 - 969439 + T 93 -19.8 -3.05844 | opp_overlap 969412 AAGGTCATAGAAAAA CGCCCGCCCCGG CTTC CCGGGACGGGCG TCTTCAAATCACCAA TERM 710 969439 - 969412 - T 100 -22 -4.98522 | opp_overlap 969412 AAGGTCATAGAAAAA CGCCCGCCCCGG CTTC CCGGGACGGGCG TCTTCAAATCACCAA Caul_0922 972230 - 969465 - | preprotein translocase subunit SecA TERM 711 970781 - 970821 + g 71 -10.3 -3.73336 | overlap 970786 CGGCTTCCTGCTCGT GGAAGCGGGCGTTCAGCAC CTG GTGCGGGATGCCCGTGTGC TTCTTGCCTTCCCAT TERM 712 970786 - 970816 + g 74 -15.4 -3.02861 | overlap 970781 TCCTGCTCGTGGAAG CGGGCGTTCAGCAC CTG GTGCGGGATGCCCG TGTGCTTCTTGCCTT TERM 713 972188 - 972210 + g 72 -4.1 -4.56597 | TCGCCTTGACCTTGC GTTCGTTGG AAGAG CCGAAGAAC TTTTTGGCGAAGCCG Caul_0923 972756 - 973748 + | PpiC-type peptidyl-prolyl cis-trans isomerase Caul_0924 973745 - 975280 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein TERM 714 975322 - 975306 - f 73 -2.9 -4.78848 | CCGCTAAATATAAAA CACCG CTCATCC CGGCG AATGCCGGGACCCAG Caul_0925 975456 - 975920 + | hypothetical protein Caul_0926 976574 - 975921 - | glutathione S-transferase domain-containing protein Caul_0927 977079 - 976726 - | hypothetical protein Caul_0928 977466 - 977116 - | hypothetical protein Caul_0929 977829 - 978590 + | ABC transporter related TERM 715 979431 - 979488 + G 77 -17.7 -2.56596 | gap 2, opp_overlap 979431, overlap 979464 CCACCCAGGGCAAGA CCGG-GGCGCGGCCG-GCCAAGGCGAG CGGCGC CTCGGCTCGGCGCGGCTTCGCCGCCGG TCCGTTCCTGGCCAC TERM 716 979488 - 979431 - g 82 -17.7 -3.06492 | gap 2, opp_overlap 979431 979464 CCACCCAGGGCAAGA CCGG-GGCGCGGCCG-GCCAAGGCGAG CGGCGC CTCGGCTCGGCGCGGCTTCGCCGCCGG TCCGTTCCTGGCCAC Caul_0930 978587 - 980140 + | hypothetical protein Caul_0931 980232 - 980444 + | hypothetical protein TERM 717 980512 - 980465 - T 76 -9 -4.09739 | gap 1, opp_overlap 980498 CGAATCTCCTCAAAA CTTGTC-ATCCCGGACACGCGCG CAG CGCGCCGATCCGGGACCGACGCG TGAACTCAGCGCTTC TERM 718 980547 - 980563 + T 83 -15.1 -3.14931 | GGTCCCGGATCTTCA CCCCGGC TGC GCCGGGG TTCGTCCGGGATGAC Caul_0932 982874 - 980595 - | signal transduction histidine kinase TERM 719 980732 - 980746 + g 74 -12.8 -3.65351 | GGTGGGGCGGCGAGA CGGGCG GCC CGCCCG TTTCGGTCCAGGTCA TERM 720 982980 - 983018 + r 100 -18.8 -4.45664 | opp_overlap 982982, overlap 982982 CCTCGTCCAACGAAA AACGGCCGTTCCCGCCCC TCG GGGGCGAAAACGGCCGTC TTTTCATTCCGTTGC TERM 721 983016 - 982982 - R 100 -25.8 -4.8622 | opp_overlap 982980 982982 TCGTCCAACGAAAAA CGGCCGTTCCCGCCCC TCG GGGGCGAAAACGGCCG TCTTTTCATTCCGTT TERM 722 982982 - 983016 + r 100 -21.4 -3.82923 | opp_overlap 982982, overlap 982980 TCGTCCAACGAAAAA CGGCCGTTCCCGCCCC TCG GGGGCGAAAACGGCCG TCTTTTCATTCCGTT Caul_0933 984504 - 983065 - | DEAD/DEAH box helicase domain-containing protein TERM 723 983341 - 983371 + g 70 -8.8 -3.8917 | CTCCGGCGGCGCCAG CTTGTCGGCCACGG CCG CGGCGGCCGCCAGG TTCTTGTCGTTGCGA TERM 724 984730 - 984747 + r 74 -6.2 -4.39828 | overlap 984729 GTGCGAAGTCAAGGG CCGCCT GGGATG GGGCGG TTTTGTCACGCTGTT Caul_0934 985227 - 984883 - | PRC-barrel domain-containing protein Caul_0935 985407 - 986690 + | major facilitator transporter TERM 725 987248 - 987214 - g 72 -14.3 -3.13403 | opp_overlap 987208, overlap 987212 987217 CGTGGCCCAGGAATA CGACGCCGCCGC-CCAG GCG CTGGTGGGGCGGCG-CG TGAACATCTTCCCCG TERM 726 987246 - 987217 - g 70 -15.7 -2.77523 | gap 1, opp_overlap 987208, overlap 987214 987212 GGCCCAGGAATACGA CGCCGCCGC-CCAG GCG CTGGTGGGGCGGCG CGTGAACATCTTCCC Caul_0936 986693 - 988333 + | Alpha-N-arabinofuranosidase TERM 727 988366 - 988344 - f 88 -16.4 -3.33261 | GGTGAAGCGCCAGAA TCCCTCTCTC AAA GAGAGAGGGA TTCACGGTTGCCAAG Caul_0937 988410 - 988814 + | mutator MutT protein Caul_0938 990086 - 989172 - | methyltransferase type 11 TERM 728 990078 - 990125 + g 75 -9.8 -4.07568 | gap 1 GAAGAGCAGGGGAGC GGTGGTCATGTCCGCGCAAGATG GGG CTTCTCGCGCGG-CATGGAAACC TTTTGCGCAACCGCC Caul_0939 990229 - 990876 + | phosphoribosyltransferase Caul_0940 990908 - 991162 + | glutaredoxin 3 Caul_0941 991159 - 991995 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Caul_0942 992011 - 992445 + | hypothetical protein TERM 729 992522 - 992489 - T 79 -15.3 -2.87132 | opp_overlap 992493, overlap 992496 GCCCTGCTCCAGACA CGAAAAAGGGGACGG TTGC CCGTCCCCCTGTCCG TTCGCCGCAGAGTTC TERM 730 992515 - 992496 - T 100 -15 -4.84527 | opp_overlap 992493, overlap 992489 TCCAGACACGAAAAA GGGGACGG TTGC CCGTCCCC CTGTCCGTTCGCCGC Caul_0943 992855 - 992541 - | 17 kDa surface antigen Caul_0944 994027 - 992987 - | 17 kDa surface antigen TERM 731 993340 - 993353 + g 75 -9.5 -4.0156 | GGGCGCCGATCACGC CGCCG GCCA CGGCG TTCTTCTTGGTGTCG Caul_0945 994531 - 994139 - | PilT domain-containing protein Caul_0946 994902 - 994528 - | hypothetical protein Caul_0947 995671 - 994913 - | 3-demethylubiquinone-9 3-methyltransferase Caul_0949 996571 - 996050 - | hypothetical protein Caul_0950 996777 - 998024 + | aspartate kinase TERM 732 998043 - 998088 + F 73 -6.9 -4.27886 | overlap 998045 998056 TGGTTAGTCAGCACT TGGTTGCAGAAGATTGTCGCT ATCT GGCGGCGATTTTCTGGAGCTG TTTGTCTCTTTCAAG TERM 733 998045 - 998086 + F 71 -9.5 -3.73323 | overlap 998043 998056 GTTAGTCAGCACTTG GTTGCAGAAGATTGTCGCT ATCT GGCGGCGATTTTCTGGAGC TGTTTGTCTCTTTCA TERM 734 998379 - 998397 + F 90 -2.4 -5.44119 | overlap 998348 CCGTTAGGTGCGGAT GAGACG GGTGTGA TGTCTC TTTTTTTGACGTCAA TERM 735 999036 - 999082 + G 86 -10.1 -4.54047 | overlap 999037 999080 CCAAGCAGTTGGTCG AGGCGGTCAAT-GCGCCGCTGGC CCT GCCAG-GGCACGGCTGACCGCCA TTTTATCTCCGCTCA TERM 736 999037 - 999081 + G 74 -13.6 -3.31946 | overlap 999036 999080 CAAGCAGTTGGTCGA GGCGGTCAAT-GCGCCGCTGGC CCT GCCAG-GGCACGGCTGACCGCC ATTTTATCTCCGCTC Caul_0951 998615 - 999076 + | hypothetical protein TERM 737 999080 - 999131 + F 100 -11.7 -4.70659 | gap 2, overlap 999037 999036 999090 GGGCACGGCTGACCG CCATTTTATCTCCGCTCATCCCGGC ATTC GCCGGGATGAGCGGATTTGG--TGG TTTTTCGCTATGCCA TERM 738 999090 - 999123 + F 100 -26.9 -3.96337 | overlap 999080 GACCGCCATTTTATC TCCGCTCATCCCGGC ATTC GCCGGGATGAGCGGA TTTGGTGGTTTTTCG Caul_0952 999125 - 1000111 + | hypothetical protein Caul_0953 1000358 - 1000846 + | hypothetical protein TERM 739 1000870 - 1000895 + F 100 -19.7 -4.77759 | overlap 1000847 TCGCCTGAACGGTCC GGCGCCGTCCC TTCG GGGGCGGCGCC TTTTTCGTGAGTTAT Caul_0954 1001111 - 1003312 + | phosphoenolpyruvate-protein phosphotransferase PtsP Caul_0955 1003472 - 1004545 + | hypothetical protein Caul_0956 1005651 - 1004851 - | hypothetical protein TERM 740 1005143 - 1005090 - G 73 -16.5 -2.62184 | gap 1, opp_overlap 1005096 CGCCGTTCCAGACCA GCACCGCC-TTGCCCCGGGCCGCCGC CTC GGGGTGGACCTGGGCGAGGGCGGCGC GGACGCGGGGATTCT Caul_0957 1005773 - 1006912 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 741 1007065 - 1007027 - T 91 -20.4 -2.70932 | overlap 1007064 CTTTGCTTTGAAGCA CTTCTTCCAGCGAGACGG TGG CCGCCTCGCTGGAAAATG CCCTAGTGATCCAGG Caul_0958 1008780 - 1007068 - | SSS family solute/sodium (Na+) symporter TERM 742 1008256 - 1008240 - G 70 -12.3 -3.38224 | overlap 1008238 AGGGGAGGCCAAACA GCAGCTG GAT CAGCTGC CCGGCCCCGACCATC Caul_0959 1009100 - 1008777 - | hypothetical protein Caul_0960 1009375 - 1010475 + | alpha/beta hydrolase domain-containing protein Caul_0961 1010497 - 1011816 + | GDSL family lipase TERM 743 1013231 - 1013176 - g 72 -13.3 -3.12668 | gap 2, opp_overlap 1013187, overlap 1013181 GAGCGTGACAGCGAA GACTATCTGCCAGCCGAGGCGCTCACC GAGC GGTGAGCGCCTCGGCCTGT-G-TCGCC GGCGCCTCAGGGCGT TERM 744 1013227 - 1013181 - g 70 -15.1 -2.76964 | gap 1, opp_overlap 1013187, overlap 1013176 TGACAGCGAAGACTA TCTGCCAGCCGAGGCGCTCACC GAGC GGTGAGCGCCTCGGCCTGT-GT CGCCGGCGCCTCAGG Caul_0962 1011964 - 1013211 + | major facilitator transporter TERM 745 1013187 - 1013222 + T 100 -24.8 -2.87132 | opp_overlap 1013181 1013176 CGAAGACTATCTGCC AGCCGAGGCGCTCACC GAGC GGTGAGCGCCTCGGCC TGTGTCGCCGGCGCC Caul_0963 1014290 - 1013238 - | alpha/beta hydrolase domain-containing protein TERM 746 1014317 - 1014343 + H 95 -19.5 -3.14931 | CCATGTTGAGCGCCT GGCTTGGCGCG CAGGC CGCGCCAAGCC TTGATCGGGGCTGGC Caul_0964 1014911 - 1016068 + | levansucrase Caul_0965 1016071 - 1016976 + | ROK family protein Caul_0966 1017032 - 1018381 + | hypothetical protein TERM 747 1019166 - 1019140 - g 78 -13.6 -3.54424 | opp_overlap 1019140 1019139 CGCGAGGCCCTGAAA GCCGCCGGCGAC GGG GTGGCCGGCGCC CTTCTGCCCGTGCAC Caul_0967 1018474 - 1019532 + | LacI family transcription regulator TERM 748 1020349 - 1020337 - g 78 -10.5 -4.18018 | opp_overlap 1020331 CGCCGTCACGCAAAA CGGCG ACT CGCCG CTCGGCTACTATCTC Caul_0968 1019990 - 1022119 + | TonB-dependent receptor TERM 749 1022213 - 1022186 - T 100 -21.4 -2.78816 | opp_overlap 1022186, overlap 1022189 CGAGGTCGCATGAGA TAAGCCCGCCGC CCCC GCGGCGGGCTTA TTTTGCTTTCGAGGT TERM 750 1022186 - 1022213 + T 100 -21.4 -4.55128 | opp_overlap 1022186 1022189 CGAGGTCGCATGAGA TAAGCCCGCCGC CCCC GCGGCGGGCTTA TTTTGCTTTCGAGGT TERM 751 1022210 - 1022189 - T 100 -18.7 -3.54475 | opp_overlap 1022186, overlap 1022186 GGTCGCATGAGATAA GCCCGCCGC CCCC GCGGCGGGC TTATTTTGCTTTCGA Caul_0969 1024331 - 1022337 - | metallophosphoesterase TERM 752 1022653 - 1022707 + g 78 -17.8 -2.80816 | ATGGTCAGCTGGCGT TGCAGGGTGAAGGGGTCCGAATAGGC GGA GCCGGTCCGGATCCCTTCGCCGCGCA TCTCCTGGGTGCGGG TERM 753 1025790 - 1025765 - g 73 -12.6 -3.51329 | gap 1, overlap 1025777 CAGCCTGAACTACAA CCGCGCC-ACC AAGCA GGTCGGCGCGG AAACCGGCGGCACCA Caul_0970 1024674 - 1027649 + | TonB-dependent receptor TERM 754 1027656 - 1027701 + F 84 -15.4 -3.28791 | overlap 1027659 GCCTTCTAGCGACGC GCGCGTCCCTCGGCCGTG CTCCTTCCCC CGCGGCCGGGGGACGTCC TTCTGAACCGGGACT TERM 755 1027659 - 1027698 + F 86 -17.9 -2.82623 | overlap 1027656 TTCTAGCGACGCGCG CGTCCCTCGGCCGTG CTCCTTCCCC CGCGGCCGGGGGACG TCCTTCTGAACCGGG Caul_0971 1027783 - 1028538 + | DeoR family transcriptional regulator Caul_0972 1029919 - 1028588 - | hypothetical protein TERM 756 1030080 - 1030055 - g 86 -6.7 -4.89063 | opp_overlap 1030077, overlap 1030062 TGACTGAAAAAGAAA GACGAACGCCC AGGC AGGCGCGCGCC GAGGCCACGGTCGAG Caul_0973 1030039 - 1030638 + | TetR family transcriptional regulator Caul_0974 1031063 - 1030677 - | OsmC family protein Caul_0975 1032534 - 1031152 - | transcriptional regulator Caul_0976 1032633 - 1033310 + | lysine exporter protein LysE/YggA Caul_0977 1033626 - 1034504 + | PE-PGRS family protein Caul_0978 1034699 - 1035178 + | hypothetical protein Caul_0979 1035812 - 1035300 - | hypothetical protein TERM 757 1035725 - 1035735 + g 72 -8.2 -4.07885 | overlap 1035720 CCTGGGCCTTGGCGT GGGC CTC GCCC TTTTCGAGCAGGCTC TERM 758 1035856 - 1035831 - H 71 -8.9 -3.90291 | AGGCTCCGAAGGAAA GGCGCGGCC TGGGGGAT GGCGGCGCC GCGAGCGGGAGATGG Caul_0980 1036049 - 1037053 + | peptide chain release factor 1 Caul_0981 1037379 - 1038950 + | hypothetical protein Caul_0982 1039593 - 1039063 - | GCN5-related N-acetyltransferase TERM 759 1039252 - 1039281 + g 83 -14.9 -3.62096 | TCCCACGGCGTGGGC CTCGGCGCGGGCC AGGA GGGCGGCGCCGAG TTTGCGGTCCTGGAG TERM 760 1039640 - 1039666 + r 100 -11.7 -4.42386 | gap 1, overlap 1039643 TGAACCCCACCTTTT CATCCGCTCATC CCGG GATGAGCGG-TG TTTTATAGGTCCGCG TERM 761 1039643 - 1039664 + r 88 -14.5 -3.82117 | overlap 1039640 ACCCCACCTTTTCAT CCGCTCATC CCGG GATGAGCGG TGTTTTATAGGTCCG Caul_0983 1040913 - 1039669 - | ribonuclease BN TERM 762 1040925 - 1040968 + H 70 -12.4 -3.11218 | gap 1, opp_overlap 1040937 TCATGGTCTGGCCCT CCGGGGGA-GGAACACCGCGG GCG CCGCCCTGTTCCGTCCGCTGG TCTTACCCTGTTTCG Caul_0984 1041024 - 1041785 + | MOSC domain-containing protein Caul_0985 1042078 - 1041782 - | plasmid stabilization system protein Caul_0986 1042326 - 1042075 - | CopG/Arc/MetJ family addiction module antidote protein Caul_0987 1042410 - 1043267 + | protein-(glutamine-N5) methyltransferase, release factor-specific Caul_0988 1043549 - 1044670 + | hypothetical protein TERM 763 1044700 - 1044749 + F 71 -11.5 -3.53224 | gap 1, opp_overlap 1044701, overlap 1044702 CTCACGACCCCAATG ACGGTT-TCATCCCGGATAAACGC TTC GCGCTTGTCCGGGATGACAGCCTA TTTGCGCCGCGGCTG TERM 764 1044702 - 1044747 + F 93 -18.5 -3.34398 | gap 1, opp_overlap 1044701, overlap 1044700 CACGACCCCAATGAC GGTT-TCATCCCGGATAAACGC TTC GCGCTTGTCCGGGATGACAGCC TATTTGCGCCGCGGC TERM 765 1045024 - 1044980 - g 72 -13.6 -3.19602 | gap 1, overlap 1044978 TGGTCGAGATCAACA CCACCGCTTCGGTCGGCAG TTGCACGG CCGCCG-CCGAGGCGATGG GCGCGCGGCTGAAGG Caul_0989 1044832 - 1046262 + | hypothetical protein TERM 766 1046815 - 1046766 - g 74 -14.4 -3.31248 | overlap 1046756 GAAGATCGTCGACAA CGACGAC-CAGCTGGCCGCCGTGA TCGG TCACGA-GGCCGGCCACGTCGTCG CCCACCACGCGGCCG Caul_0990 1046425 - 1047168 + | peptidase M48 Ste24p Caul_0991 1047263 - 1049857 + | ATP-dependent chaperone ClpB TERM 767 1049884 - 1049906 + F 100 -20.6 -5.05601 | CCTCGAATCCCCCAT GGGCGCGTCC GTC GGACGCGCCC TTTTTCTGTCTGGTA Caul_0992 1050185 - 1050757 + | OmpA/MotB domain-containing protein Caul_0993 1051577 - 1050837 - | short-chain dehydrogenase/reductase SDR Caul_0994 1051716 - 1052594 + | LysR family transcriptional regulator Caul_0995 1053280 - 1052639 - | glutathione S-transferase domain-containing protein Caul_0996 1056019 - 1053521 - | multi-sensor hybrid histidine kinase TERM 768 1055947 - 1055961 + g 75 -8.5 -4.13014 | overlap 1055924 CGACCGCGGCGATCA CGGCG AGCAA CGCCG TTTTCAGAATGTCAC TERM 769 1056121 - 1056149 + r 74 -10.1 -3.68988 | overlap 1056122 TGCGGCGCGGCCCAT CGCCGCGCCCTCA GGT TGCGGGCGCCGCC TTATGTTGCGTAACC TERM 770 1056122 - 1056148 + r 72 -13.6 -2.81072 | overlap 1056121 GCGGCGCGGCCCATC GCCGCGCCCTCA GGT TGCGGGCGCCGC CTTATGTTGCGTAAC Caul_0997 1057064 - 1056150 - | Beta-lactamase Caul_0998 1057160 - 1058032 + | LysR family transcriptional regulator Caul_0999 1058340 - 1058071 - | hypothetical protein Caul_1000 1058422 - 1059027 + | hypothetical protein TERM 771 1059122 - 1059080 - T 71 -13.2 -3.06261 | overlap 1059045 CGCGAAGCGCGAAGA TCCGGGACCGACGCGTGAGC TCA GCGCTTCCGGCGGTCCCGGA TCTGCGCCCGGCTTC Caul_1001 1060374 - 1059172 - | acetyl-CoA acetyltransferase TERM 772 1060581 - 1060527 - H 100 -17.3 -4.08064 | gap 1, overlap 1060528 AATGCCGTTTGAAAA GCGGGAGCGCGATAGCCGCC-TAAAC CGGA ATTCACGGCGGCCATCACGCTCCCAG TGGGCAACCGAGAGA TERM 773 1060580 - 1060528 - H 93 -20.8 -3.04517 | gap 1, overlap 1060527 ATGCCGTTTGAAAAG CGGGAGCGCGATAGCCGCC-TAAAC CGGA ATTCACGGCGGCCATCACGCTCCCA GTGGGCAACCGAGAG TERM 774 1060628 - 1060615 - H 85 -3.1 -5.25803 | AATTGCTATAAAAAA CCTAC TCGC GTAAG TCTGCAAAAGCAACC Caul_1002 1060680 - 1061183 + | HxlR family transcriptional regulator Caul_1003 1061373 - 1061930 + | sugar transferase Caul_1004 1062061 - 1061927 - | hypothetical protein TERM 775 1062153 - 1062169 + r 75 -3.5 -4.84527 | overlap 1062154 1062156 AAAGTTTCGCATGTC ACTCGCC TAA GGCGTGA TTTTTCATCTCTACC TERM 776 1062384 - 1062357 - R 100 -10.4 -4.81083 | GCGAATCAGGAAAAA GCCGGCCCGGCC GTCC GACCGGCGCGGC CCTAGAGCCCCGCCC Caul_1005 1063615 - 1062386 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Caul_1006 1064593 - 1063670 - | flagellin, putative TERM 777 1064290 - 1064324 + g 74 -14.2 -3.36327 | GGGTCTCGGCGCTGC CGGCCGCGATGGCGTT GGC GACGGCGTCGCGGGCG TTCTGGGTGGCGTCC Caul_1007 1066717 - 1064603 - | flagellar hook-associated protein FlgK Caul_1008 1067119 - 1068795 + | flagellar hook-length control protein Caul_1009 1068807 - 1069505 + | flagellar hook capping protein Caul_1010 1069627 - 1071297 + | hypothetical protein Caul_1011 1071467 - 1071748 + | hypothetical protein TERM 778 1071848 - 1071811 - f 93 -19.9 -3.05844 | gap 1, opp_overlap 1071811, overlap 1071813 1071816 CGGTCCAGTCGAACA GATCAGCGGCCACGTCCC CCT GGGGCGTGGCCGC-GACC TTTTGGCGCCCCTCC TERM 779 1071811 - 1071848 + F 100 -19.9 -4.08216 | gap 1, opp_overlap 1071811 1071813 1071816 CGGTCCAGTCGAACA GATCAGCGGCCACGTCCC CCT GGGGCGTGGCCGC-GACC TTTTGGCGCCCCTCC TERM 780 1071846 - 1071813 - f 91 -18.9 -3.08813 | gap 1, opp_overlap 1071811, overlap 1071811 1071816 GTCCAGTCGAACAGA TCAGCGGCCACGTCCC CCT GGGGCGTGGCCGC-GA CCTTTTGGCGCCCCT TERM 781 1071844 - 1071816 - f 100 -21.7 -2.75826 | opp_overlap 1071811, overlap 1071813 1071811 CAGTCGAACAGATCA GCGGCCACGTCCC CCT GGGGCGTGGCCGC GACCTTTTGGCGCCC Caul_1012 1071994 - 1073637 + | flagellar MS-ring protein Caul_1013 1073637 - 1074656 + | flagellar motor switch protein G Caul_1014 1074669 - 1075316 + | flagellar assembly protein H Caul_1015 1075322 - 1075657 + | flagellar motor switch protein TERM 782 1075704 - 1075663 - f 79 -11.1 -3.90112 | gap 1, opp_overlap 1075678 1075679, overlap 1075664 1075678 CGCCGGCTAACGAAA CTCGTCCTTCGACAAGCTCA GGA TGAGGTT-TCGAAGGACAAA CAAGTAGCCCTCATC TERM 783 1076772 - 1076724 - g 83 -14.5 -3.62046 | overlap 1076727 1076754 GCACTTCGTGAAGAA GTACTCGGCCGCCAACGGCTT GCCGGAA AAGCCGATCGCGGCCGAGGCC AAGCGCCGGCTGATC TERM 784 1076769 - 1076727 - g 82 -19.2 -2.93073 | overlap 1076724 1076754 CTTCGTGAAGAAGTA CTCGGCCGCCAACGGCTT GCCGGAA AAGCCGATCGCGGCCGAG GCCAAGCGCCGGCTG Caul_1016 1075801 - 1077168 + | two component, sigma54 specific, Fis family transcriptional regulator TERM 785 1077174 - 1077216 + F 75 -14.1 -2.9732 | opp_overlap 1077159, overlap 1077171 CGCGGCCTGACCGGG GCCGAG-CCGGGGCCGCGACC ATC GGTC-CGGCGCCGGACATGGC TAATTTCGATTAAGC Caul_1017 1077295 - 1079406 + | flagellar biosynthesis protein FlhA Caul_1018 1079686 - 1080225 + | hypothetical protein Caul_1019 1080353 - 1080763 + | hypothetical protein Caul_1020 1080886 - 1081335 + | XRE family transcriptional regulator Caul_1021 1082504 - 1081338 - | endo-1,4-beta-xylanase Caul_1022 1082913 - 1082494 - | FliJ protein Caul_1023 1084250 - 1082913 - | flagellum-specific ATP synthase TERM 786 1084385 - 1084432 + r 85 -14.8 -3.57144 | overlap 1084390 1084392 TATGTCTTGAGCCTC ACTACTATCCGCCCTTCCCGGC CTTC GCCGGGAAGAGCGGATCTTGGG TTTAGGGCTGGCCCA TERM 787 1084390 - 1084427 + r 95 -19.9 -3.28001 | overlap 1084385 1084392 CTTGAGCCTCACTAC TATCCGCCCTTCCCGGC CTTC GCCGGGAAGAGCGGATC TTGGGTTTAGGGCTG TERM 788 1084392 - 1084425 + r 100 -22.5 -3.20349 | overlap 1084390 1084385 TGAGCCTCACTACTA TCCGCCCTTCCCGGC CTTC GCCGGGAAGAGCGGA TCTTGGGTTTAGGGC Caul_1024 1085426 - 1084434 - | hypothetical protein Caul_1025 1085554 - 1086348 + | response regulator receiver protein Caul_1026 1086755 - 1087450 + | two component transcriptional regulator TERM 789 1087481 - 1087504 + F 100 -16 -5.42198 | opp_overlap 1087480 1087477 GGCTTTGAAATTGAG CGCCCGCCTC CCTG GAGGTGGGCG TTTTCTTTTTTAAAG Caul_1027 1087680 - 1089074 + | peptidase M23B TERM 790 1090509 - 1090481 - g 81 -7.3 -4.56597 | overlap 1090485 GGGCTGGGCCAAAAA CGAACCCTCTCTC ATG GAGAGAGGGAGGG ACCCGCCGCGTAGCG TERM 791 1090505 - 1090485 - g 88 -15.5 -3.80855 | overlap 1090481 TGGGCCAAAAACGAA CCCTCTCTC ATG GAGAGAGGG AGGGACCCGCCGCGT Caul_1028 1089407 - 1090522 + | acyltransferase 3 Caul_1029 1090650 - 1090943 + | hypothetical protein Caul_1030 1091276 - 1090971 - | hypothetical protein TERM 792 1091495 - 1091547 + G 100 -25.6 -2.8547 | gap 1, opp_overlap 1091487 1091530 TCCAATACGGGACGC GGGCGACGGGGCCGGCGC-GGCG CCCCCACA CGCAAGCGCCGGCCCCGTCGCCG TCTGATCTGGCCGCT TERM 793 1091648 - 1091626 - g 91 -3.3 -5.45726 | gap 1 GACATCCTAAAAAAA GCCGCGCTCA TCTT CG-GAGCGGC CTCCCGATGAAGTTC Caul_1031 1091344 - 1091658 + | transposase IS3/IS911 family protein TERM 794 1092217 - 1092207 - g 75 -4.6 -4.56775 | opp_overlap 1092189 ATCGCGCGCCAAAAA CCCG CGC CAGG CCTTATTCATCATTC Caul_1032 1091655 - 1092515 + | integrase catalytic region Caul_1033 1093278 - 1092583 - | hydrolase Caul_1034 1093506 - 1093339 - | hypothetical protein Caul_1035 1093743 - 1093609 - | hypothetical protein TERM 795 1093915 - 1093871 - R 79 -8.5 -4.27316 | opp_overlap 1093871 1093888 CCCTGGAAGCGAAAA CCTCGTCCTTCGACAAGCTCA GGA TGAGGTTTTCGACTGTCGAGG CTCGCAAAATGGTCC TERM 796 1093961 - 1093925 - R 83 -11.6 -4.08767 | overlap 1093953 TCGAGGCTCGCAAAA TGGTCCTCATCCTGAG CCTGT CGAAGGACGAGGACCA CGCACCGCTCAGACG Caul_1036 1094275 - 1093979 - | hypothetical protein TERM 797 1094471 - 1094497 + H 100 -12.9 -4.57569 | opp_overlap 1094456, overlap 1094449 CGCCGCCGTTTGCGC GGCGGGTGGGG TTACT CCCGGCCCGCC TTTTTGCGACAATGA Caul_1037 1094552 - 1095718 + | carbamoyl phosphate synthase small subunit TERM 798 1097280 - 1097296 + G 79 -2.1 -4.82901 | overlap 1097280 ATGAGGACAAGCTTC GTCTCGC TGA GCCTGAC TTTTTCTAGCGACCA Caul_1038 1095857 - 1097305 + | hypothetical protein Caul_1039 1098926 - 1097322 - | carboxylesterase type B TERM 799 1097657 - 1097687 + g 77 -14.7 -3.23395 | gap 1, overlap 1097658 GCCAGTCCAGCTGGT AG-GCCCAGGCCGG AGCG CCGGCCTGGGCGCG TTCCTCGTCCTGGAT TERM 800 1097658 - 1097686 + g 77 -18.2 -2.53715 | gap 1, overlap 1097657 CCAGTCCAGCTGGTA G-GCCCAGGCCGG AGCG CCGGCCTGGGCGC GTTCCTCGTCCTGGA TERM 801 1099419 - 1099451 + r 75 -4 -4.7254 | gap 1, overlap 1099420 TTTGTACGTCCAATC CTCGGTGC-GTCGCG CTTC CGCGCCAGCGTCGAA TTTTTGCTGCCCAAT Caul_1040 1101290 - 1099968 - | mannanase, putative TERM 802 1100991 - 1101015 + g 70 -12.1 -3.28712 | overlap 1101008 CCCGCGGAAGGTGGG GTCGATGGCCA CCT TGGCCGGCGAC TTCTCGCCCGAACCC Caul_1041 1101437 - 1101775 + | MarR family transcriptional regulator Caul_1042 1101772 - 1102209 + | activator of Hsp90 ATPase 1 family protein Caul_1043 1102206 - 1102844 + | glutathione S-transferase domain-containing protein TERM 803 1103086 - 1103047 - T 88 -15 -3.76641 | opp_overlap 1103050, overlap 1103050 AGGTGAAGATCGAAA CCATCGGCCATGGGCGAA GAAT CTCGCCCATGGCCGGTAT CGTCAAGGTCAGAGA TERM 804 1103050 - 1103083 + T 91 -20.4 -2.79183 | opp_overlap 1103047 1103050 TGAAGATCGAAACCA TCGGCCATGGGCGA AGAATC TCGCCCATGGCCGG TATCGTCAAGGTCAG TERM 805 1103083 - 1103050 - T 91 -18.9 -2.974 | opp_overlap 1103050, overlap 1103047 TGAAGATCGAAACCA TCGGCCATGGGCGAA GAAT CTCGCCCATGGCCGG TATCGTCAAGGTCAG Caul_1044 1106187 - 1103095 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 806 1105494 - 1105513 + g 85 -16.4 -3.62522 | TGACCGACACGCCGT GGCCGGCC TCGG GGCCGGCC TTGTTCGACAGCTTG TERM 807 1105723 - 1105753 + g 82 -13.3 -3.72027 | gap 1 GCCGACGGCGGCGCG GATCACCGGCTCGC CCAG GCG-GCCGGCGATC TTCTTGATGAACCCT TERM 808 1106233 - 1106245 + H 81 -7.7 -4.49556 | overlap 1106226 1106224 TATCGCCGCCTTGTT CGAAG GTG CTTCG TTTGTTTGCTGGCAG TERM 809 1106646 - 1106664 + H 72 -3.8 -4.58085 | overlap 1106656 ATCGAGGGTATAGTC GCGCCT GAACCGA AGGTGC TTTGTTTGTCGATAT Caul_1045 1106713 - 1107180 + | AsnC family transcriptional regulator TERM 810 1107258 - 1107237 - T 100 -17.3 -5.35815 | opp_overlap 1107230 1107237 GAGACCAAAGAAAAA GGCCCGGGA TCGC TCCCGGGCC TTCTCAATTTCGCCC TERM 811 1107237 - 1107258 + T 93 -17.3 -3.47349 | opp_overlap 1107237, overlap 1107230 GAGACCAAAGAAAAA GGCCCGGGA TCGC TCCCGGGCC TTCTCAATTTCGCCC Caul_1046 1108242 - 1107301 - | electron transfer flavoprotein alpha subunit Caul_1047 1108988 - 1108242 - | electron transfer flavoprotein alpha/beta-subunit TERM 812 1108344 - 1108397 + g 72 -4.5 -4.4634 | overlap 1108348 1108360 GACCTTGACGACCTT GAGG-CGCGGGGCGATGTCGACGCC ATAGTC GGCGACGGTCTTGCT-CGCGATCTC TTTCTTCTTGGCCTT Caul_1048 1109234 - 1109503 + | hypothetical protein TERM 813 1109545 - 1109579 + T 91 -15.7 -3.84451 | gap 1, opp_overlap 1109565 1109566, overlap 1109546 GGTTGAAAGACATTG ACGCCGCGATCGGGCC GAAA GGCC-GGTCGCGGCGG TTTGCGTTTGAGAGA TERM 814 1109546 - 1109578 + T 91 -19.2 -2.90349 | gap 1, opp_overlap 1109565 1109566, overlap 1109545 GTTGAAAGACATTGA CGCCGCGATCGGGCC GAAA GGCC-GGTCGCGGCG GTTTGCGTTTGAGAG Caul_1049 1110233 - 1109655 - | ATP--cobalamin adenosyltransferase TERM 815 1110408 - 1110444 + r 100 -18 -4.33105 | GCGTATGCGTTCCAG CGCGACGGTCGTCCAG TCCCC CCGGATGGCCGTCGCG TTTTAGTGCTGCTTC Caul_1050 1110644 - 1110447 - | hypothetical protein TERM 816 1111164 - 1111150 - g 73 -7 -4.19953 | CATTGAATTCGAAAA GCGGGC CGA GGCCGC GCTTGCCCGCCTGGA Caul_1051 1110965 - 1111192 + | hypothetical protein TERM 817 1111743 - 1111753 + G 78 -6.8 -4.58395 | opp_overlap 1111743 GTATGTCGCCAACTA TCGC CGG GCGA TTTTTGACGCCTGGA Caul_1052 1111189 - 1111836 + | TetR family transcriptional regulator TERM 818 1111889 - 1111839 - f 100 -19.9 -4.08767 | gap 1, opp_overlap 1111845 1111850, overlap 1111846 CGCACGCGCTTAAAA TTCAGAACCGTGGGCGGGCGCTCT TTGA AGAGCGTCCGCCCACGGAT-TAAA TACGCCAGCTATCCG TERM 819 1111845 - 1111884 + F 100 -25.8 -3.05463 | opp_overlap 1111839 1111846, overlap 1111850 CGCTTAAAATTCAGA ACCGTGGGCGGGCGCTCT TTGA AGAGCGTCCGCCCACGGA TTAAATACGCCAGCT TERM 820 1111883 - 1111846 - f 100 -27.1 -3.52113 | opp_overlap 1111845 1111850, overlap 1111839 GCTTAAAATTCAGAA CCGTGGGCGGGCGCTCT TTGA AGAGCGTCCGCCCACGG ATTAAATACGCCAGC TERM 821 1111975 - 1111941 - g 76 -2.7 -4.79826 | gap 1, opp_overlap 1111967, overlap 1111944 AGAGACGATCAAAAA CAGGCGACGCGCGAGA AGGT CCTCGAG-GCCGCGCG CGACCTGTTCAACGA Caul_1053 1111917 - 1112519 + | TetR family transcriptional regulator TERM 822 1112756 - 1112707 - T 100 -19.4 -4.67048 | opp_overlap 1112719, overlap 1112709 CGATGTGAAAACAAA GACCTAGAGAAAGCCGTGCGAT TCCTAT ATCGCGCGGCTTGCTCTAGGAC AGCGCCCGGATCAGG TERM 823 1112754 - 1112709 - T 100 -20.6 -3.94471 | opp_overlap 1112719, overlap 1112707 ATGTGAAAACAAAGA CCTAGAGAAAGCCGTGCGAT TCCTAT ATCGCGCGGCTTGCTCTAGG ACAGCGCCCGGATCA TERM 824 1112719 - 1112744 + T 74 -12.6 -3.25823 | opp_overlap 1112709 1112707 AAAGACCTAGAGAAA GCCGTGCGAT TCCTAT ATCGCGCGGC TTGCTCTAGGACAGC Caul_1054 1112944 - 1112750 - | hypothetical protein TERM 825 1113006 - 1113029 + r 70 -12.4 -3.16564 | GCGGTGCGCCCCTCT CCCTTGGCCC GCAA GGGGCAAGGG TTCGTCGAGTCCCCC Caul_1055 1114687 - 1113044 - | beta-lactamase Caul_1056 1115814 - 1114825 - | hypothetical protein TERM 826 1116200 - 1116215 + G 82 -8.2 -4.41206 | GATCGCCAAGGACCT CGCGGC CATG GTCGCG TTTTATGAACTCGTT Caul_1057 1116162 - 1116563 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_1058 1117373 - 1117756 + | hypothetical protein Caul_1059 1119615 - 1117906 - | acyl-CoA dehydrogenase domain-containing protein Caul_1060 1119735 - 1120361 + | glutathione S-transferase domain-containing protein TERM 827 1120369 - 1120395 + T 72 -12.2 -3.32022 | opp_overlap 1120350 1120349 1120362, overlap 1120370 GGGAGTAAGGCTTTG ACACCCTCTCCC CCT GGGAGAGGGCGC TTAGTGTCTACGCCA TERM 828 1120370 - 1120394 + T 77 -15.7 -2.58999 | opp_overlap 1120350 1120349 1120362, overlap 1120369 GGAGTAAGGCTTTGA CACCCTCTCCC CCT GGGAGAGGGCG CTTAGTGTCTACGCC Caul_1061 1120672 - 1120403 - | hypothetical protein Caul_1062 1120833 - 1121414 + | SH3 type 3 domain-containing protein TERM 829 1121459 - 1121491 + T 85 -15.6 -3.46285 | overlap 1121462 AAGGCCCCAGTACGG CGAGCCCGTCTGTC CCCCC GGCAGGCGGGCTTG TTGCTGTTTGCGATG TERM 830 1121462 - 1121488 + T 86 -13.7 -3.8613 | overlap 1121459 GCCCCAGTACGGCGA GCCCGTCTGTC CCCCC GGCAGGCGGGC TTGTTGCTGTTTGCG TERM 831 1121653 - 1121601 - T 70 -10.4 -3.57144 | overlap 1121577 TCCTCCACCGTGAAA CGGGG-GAGGTGGCGGCGAAGCCGCC GGA GGGGGCGTC-CTGCAGCCTCACCCCG CCGCCGACGCGAAGC Caul_1063 1123461 - 1121695 - | 67 kDa myosin-cross-reactive antigen family protein Caul_1064 1125025 - 1123862 - | Rieske (2Fe-2S) domain-containing protein Caul_1065 1126675 - 1125203 - | hypothetical protein TERM 832 1125604 - 1125620 + g 73 -12.3 -3.50853 | TGATCCACGCTTCGG CGTCCTG CGG CAGGACG TTCTCCTTGGGCGAG TERM 833 1126756 - 1126778 + H 71 -12.7 -3.02144 | AATACAGGGTTCGGT TGGCGGCGA ACACC TCGCCGCCG TCTTCCCGGCCCTCA Caul_1066 1126997 - 1127962 + | NAD-dependent epimerase/dehydratase TERM 834 1128087 - 1128037 - T 71 -11.1 -3.40403 | gap 2, opp_overlap 1127998 1127997, overlap 1128039 1128040 TGCGGGTGAGGAGAA GATCGGCGCGGTTCTCCTCCCCCGT GAA ACGGGGGAGGAGG-C-GCGTCGCTA GCAGCGACGTGACGG TERM 835 1128085 - 1128039 - T 77 -13.7 -3.27475 | gap 2, opp_overlap 1127998 1127997, overlap 1128037 1128040 CGGGTGAGGAGAAGA TCGGCGCGGTTCTCCTCCCCCGT GAA ACGGGGGAGGAGG-C-GCGTCGC TAGCAGCGACGTGAC TERM 836 1128084 - 1128040 - T 83 -17.2 -2.56271 | gap 2, opp_overlap 1127998 1127997, overlap 1128039 1128037 GGGTGAGGAGAAGAT CGGCGCGGTTCTCCTCCCCCGT GAA ACGGGGGAGGAGG-C-GCGTCG CTAGCAGCGACGTGA Caul_1067 1129392 - 1128118 - | crotonyl-CoA reductase TERM 837 1128207 - 1128226 + g 73 -12.2 -3.40403 | CCATGTTGCCGGGCA GATGCTGG TTGG CCAGCATC TTCTCGTGGGCGGCG TERM 838 1130481 - 1130508 + G 77 -15.6 -3.14132 | gap 1, opp_overlap 1130462 1130461, overlap 1130500 GGCCCTGGTCGCCAG CGCCGACCATCGC GAG GCGGTGG-CGGCG TTCATGGCCAAGCGC Caul_1068 1129816 - 1130547 + | enoyl-CoA hydratase/isomerase Caul_1069 1130829 - 1130936 + | hypothetical protein Caul_1070 1130974 - 1131099 + | hypothetical protein Caul_1071 1131128 - 1131460 + | hypothetical protein Caul_1072 1131474 - 1131722 + | hypothetical protein Caul_1073 1131719 - 1132024 + | hypothetical protein TERM 839 1132058 - 1132072 + T 78 -3.4 -5.07652 | opp_overlap 1132036, overlap 1132028 ACCTGATTGCATCAG GCCGGG GCT CTAGGC TTTTGTTTTAACGCA Caul_1074 1133576 - 1132131 - | signal transduction histidine kinase Caul_1075 1134391 - 1133927 - | ferric uptake regulator family protein TERM 840 1134353 - 1134324 - G 74 -12.8 -3.5393 | gap 1 AGCAGGCGCGGCAAA GGGCCGTGGCCGG GCAGG CCGGCC-CGGCGC AGCGCCTCGCGAAAC Caul_1076 1136719 - 1134506 - | catalase/peroxidase HPI TERM 841 1136021 - 1136078 + g 74 -13.4 -3.31144 | gap 1, opp_overlap 1136053 CAGCGGGTCGGGCTT GCCGTTGGG-GCCTTCCGGATTGACGT AGATC AGGCCCATCTGGACGGCGCCCAGCGGC TTGTCCAGCTCGCGC TERM 842 1136847 - 1136797 - H 70 -11.7 -3.21099 | opp_overlap 1136823 1136843 GGCGTCTAGGACGAA GGCGCCGGCCAGGGACGCGCC CGATGGGGC GGCAAGTCCTTGGCTGGCGAC GCGCGCCAAGCGCTG TERM 843 1137861 - 1137906 + G 81 -18.9 -2.74792 | gap 1, overlap 1137867 GGTGGGCGAGGTCAT CGCCGCCCGCCTGCGCGGCTTC GCC GAGGGCGCGGCGGCGGG-GGCG GTTTAGGGCTCCTAA TERM 844 1137867 - 1137907 + G 93 -18.1 -3.58343 | overlap 1137861 CGAGGTCATCGCCGC CCGCCTGCGCGGCTTCGCC GAG GGCGCGGCGGCGGGGGCGG TTTAGGGCTCCTAAA Caul_1077 1137007 - 1137912 + | LysR family transcriptional regulator TERM 845 1137917 - 1137963 + T 83 -15.9 -3.14132 | gap 1, opp_overlap 1137923 1137962 GGGCGGTTTAGGGCT CCT-AAATCCGCTCATCCCGGC CTTC GCCGGGATGAGCGGAGACGAGG TTACTGCCCCGGCGC TERM 846 1137956 - 1137923 - T 100 -26.9 -3.53811 | opp_overlap 1137917 TTTAGGGCTCCTAAA TCCGCTCATCCCGGC CTTC GCCGGGATGAGCGGA GACGAGGTTACTGCC Caul_1078 1140147 - 1137964 - | 1A family penicillin-binding protein Caul_1079 1141982 - 1140444 - | CBS sensor hybrid histidine kinase TERM 847 1140645 - 1140684 + g 79 -15 -3.2794 | gap 1 GCCGGGCAGTTCGCG GATGGCGCGGGTGG-CGGC GAC GCCGTCCATGCGCGGCATC TTGATGTCCATCAGG TERM 848 1141869 - 1141829 - G 72 -13.9 -3.13403 | overlap 1141827 TCTGGCCCAGGAACA CGTCGCGATAGACCAGCCC CAC GGGCTTGCCCGCCACGACG ACGGCCACGGCGGCG TERM 849 1142106 - 1142083 - R 100 -19.6 -5.07486 | opp_overlap 1142083 1142098 GACCTCGAACAAAAA GGGCGGCGGA TCGC TCCGCCGCCC TCTCTGGTTCCGCGG TERM 850 1142083 - 1142106 + r 93 -19.6 -3.00298 | opp_overlap 1142083, overlap 1142098 GACCTCGAACAAAAA GGGCGGCGGA TCGC TCCGCCGCCC TCTCTGGTTCCGCGG Caul_1080 1144948 - 1142135 - | TonB-dependent receptor TERM 851 1142282 - 1142294 + g 72 -6.2 -4.28254 | GGCGTCGATCTGCAG GCCC CACTC GGGC TTTTCGATCTTCAGG TERM 852 1144591 - 1144616 + g 71 -11.1 -3.63515 | gap 1, overlap 1144592 CGTGGACGCCGACGC CGCCGTCGGTCG AGA CG-CCGACGGCC TTGTTGCCGATGCCC TERM 853 1144592 - 1144615 + g 70 -14.6 -2.77895 | gap 1, overlap 1144591 GTGGACGCCGACGCC GCCGTCGGTCG AGA CG-CCGACGGC CTTGTTGCCGATGCC Caul_1081 1145428 - 1146180 + | exsB protein Caul_1082 1146334 - 1146966 + | hypothetical protein Caul_1083 1147040 - 1147405 + | queuosine biosynthesis protein QueD Caul_1084 1148389 - 1147451 - | transposase IS116/IS110/IS902 family protein Caul_1085 1149057 - 1148689 - | hypothetical protein Caul_1086 1150936 - 1149488 - | RND efflux system outer membrane lipoprotein Caul_1087 1154115 - 1150936 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein Caul_1088 1155507 - 1154329 - | RND family efflux transporter MFP subunit TERM 854 1155093 - 1155109 + g 81 -10.1 -4.2828 | AAAGCCGGTCGAATT CGCTCTG GGC CAGGGCG TTTTGCTCGATCAGC Caul_1089 1155923 - 1156561 + | TetR family transcriptional regulator Caul_1090 1157077 - 1157304 + | hypothetical protein Caul_1091 1158330 - 1157362 - | magnesium and cobalt transport protein CorA Caul_1092 1158495 - 1160171 + | major facilitator transporter TERM 855 1160189 - 1160238 + T 70 -12.1 -3.14132 | gap 1, overlap 1160191 1160207 GTGCGGGCTCCTTTC AG-TCGTCATCCCGGATCTGCGCG CCA CGCGCTTGTCCGGGATGACAATCC TTGATGGCCGAAAGG TERM 856 1160191 - 1160235 + T 87 -19.3 -2.77899 | overlap 1160189 1160207 GCGGGCTCCTTTCAG TCGTCATCCCGGATCTGCGCG CCA CGCGCTTGTCCGGGATGACAA TCCTTGATGGCCGAA TERM 857 1160283 - 1160256 - T 74 -14.2 -2.64472 | gap 1, overlap 1160253 1160252 GATGGCCGAAAGGCA GGACGCCGAGGGC CGC GCCCTCAG-GTCC CGGTCAGCAGGCCGT Caul_1093 1160782 - 1160276 - | hypothetical protein TERM 858 1160528 - 1160571 + g 74 -13.1 -3.57144 | overlap 1160528 GCCGACCGCGGCCAT C-CGCCGGGCGCGGCGCAGGG CCGC CTCGGCGTCGCGCT-GGCGAG TTTCAGCCTCGCGCA TERM 859 1161783 - 1161803 + G 75 -9.6 -4.00348 | overlap 1161779 TGCGGGCCATGGGCG CGGCGCCG CCGCC CAGCGCCG TTTCCTTCCTTCGCC Caul_1094 1161119 - 1162243 + | AraC family transcriptional regulator Caul_1095 1162749 - 1162246 - | GCN5-related N-acetyltransferase Caul_1096 1162866 - 1163156 + | hypothetical protein TERM 860 1163175 - 1163226 + T 76 -10.1 -3.85817 | gap 2, opp_overlap 1163162 1163182, overlap 1163165 1163175 CACGCGGCGGCTTCC G-GAACGAGG-GCGCGGCCATTTCC GGGA GGAAACGGCCGCGCTCCAAGTCCAC TTTCTCCGACGCGAT TERM 861 1163217 - 1163182 - T 91 -21.2 -2.70932 | opp_overlap 1163165 1163175 1163175 CGGCTTCCGGAACGA GGGCGCGGCCATTTCC GGGA GGAAACGGCCGCGCTC CAAGTCCACTTTCTC Caul_1097 1163825 - 1163280 - | tail collar domain-containing protein Caul_1098 1164409 - 1163858 - | tail collar domain-containing protein Caul_1099 1164986 - 1164447 - | tail collar domain-containing protein TERM 862 1165161 - 1165145 - H 91 -12.3 -4.27117 | opp_overlap 1165130 GCTGCACAACAGAAA GGCGAAC GAT GTTCGCC GATTAGCGTGCTGCT TERM 863 1166363 - 1166335 - g 72 -8.7 -4.07568 | opp_overlap 1166321 1166316 CGGCGGCGCGGAAAA CGGCGTCAGCCTG TTC CGGGTCAACGCCG GCGGTTCGCTGACGG TERM 864 1172135 - 1172185 + G 85 -18 -3.21416 | opp_overlap 1172130 1172133 GGTAACGACATCATC CGCGGCGGTGTCGGCCCCGACCGG ATG CAGGGCGGGGCCGGCGACGACACG TTCGTCATCGGGGTC Caul_1100 1165427 - 1172464 + | hemolysin-type calcium-binding region Caul_1101 1172681 - 1172520 - | putative transposase TERM 865 1173287 - 1173257 - g 78 -6.6 -4.57569 | overlap 1173258 1173259 GCACGCCGGCAAAAA GGGGGGCTCATGCC CAG GGCCTGGGCCGCTC CCGCGGCGGGCTGAG Caul_1102 1172915 - 1173301 + | putative transposase Caul_1103 1173343 - 1173597 + | ISCc1, transposase OrfB TERM 866 1173776 - 1173828 + G 100 -25.6 -2.8547 | gap 1, opp_overlap 1173768 1173811 TCCAATACGGGACGC GGGCGACGGGGCCGGCGC-GGCG CCCCCACA CGCAAGCGCCGGCCCCGTCGCCG TCTGATCTGGCCGCT TERM 867 1173929 - 1173907 - g 91 -3.3 -5.45726 | gap 1 GACATCCTAAAAAAA GCCGCGCTCA TCTT CG-GAGCGGC CTCCCGATGAAGTTC Caul_1104 1173625 - 1173939 + | transposase IS3/IS911 family protein Caul_1105 1173936 - 1174796 + | integrase catalytic region Caul_1106 1175065 - 1175445 + | putative transposase of insertion sequence ISRm2011-2, orfA protein Caul_1107 1175507 - 1176010 + | transposase and inactivated derivatives-like protein TERM 868 1176011 - 1176038 + T 80 -15 -3.14931 | GGCTATGCCGCCTAA TCTCAACACGCT CTAG GGCGTGTTGAGA TTCATCGCGAGTGAA Caul_1108 1176426 - 1176040 - | transposase IS4 family protein Caul_1109 1176791 - 1176423 - | transposase and inactivated derivative Caul_1110 1177757 - 1176846 - | formyltetrahydrofolate deformylase TERM 869 1177814 - 1177783 - R 100 -16.6 -4.25104 | opp_overlap 1177783 GGGCTTTCACGAAAA CGGGCCGCGACCAC CGAC ATGATCGCGACCCG TGCTTCAAGCCGGTC Caul_1111 1180271 - 1178007 - | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor Caul_1112 1180434 - 1180613 + | hypothetical protein Caul_1113 1180613 - 1181230 + | hypothetical protein TERM 870 1181684 - 1181658 - g 74 -10.9 -3.78778 | gap 2, overlap 1181661 CCACGACACCAACAA GGA-CGG-CGCGG TCA CCGCGGCCGATCC GGTGGCGGAAGACAC Caul_1114 1181245 - 1181706 + | hypothetical protein TERM 871 1181743 - 1181709 - f 100 -20.9 -4.48333 | gap 1, opp_overlap 1181700 1181700, overlap 1181711 AGACACGAACTAAAA TACCGCTCATCCCGGC GAAT GCCGGGATGAGCGG-A TCACATTAGCAACTA TERM 872 1181742 - 1181711 - f 100 -26 -3.84039 | opp_overlap 1181700 1181700, overlap 1181709 ACACGAACTAAAATA CCGCTCATCCCGGC GAAT GCCGGGATGAGCGG ATCACATTAGCAACT TERM 873 1181882 - 1181837 - g 78 -9.6 -4.1899 | gap 1 CGATCGTATCGAAAA GACCGTCGAGCTGAACGCGCC GATCG AGCGCGTCTGGCGCG-CGGTC AGCGACCACAGGGAA Caul_1115 1181817 - 1182263 + | activator of Hsp90 ATPase 1 family protein Caul_1116 1182250 - 1182603 + | ArsR family transcriptional regulator TERM 874 1182638 - 1182680 + T 71 -13.2 -3.01924 | opp_overlap 1182603 1182599 1182622 CGCGTAGCGCGCCGA TCCGGGACCGACGCCTGAGC GCA GCGCTTCCGGCGGTCCCGGA TCTTCACCCCGGCTA Caul_1117 1183421 - 1182732 - | glyoxalase/bleomycin resistance protein/dioxygenase Caul_1118 1183541 - 1184683 + | alpha/beta hydrolase fold Caul_1119 1186657 - 1184735 - | peptidase M61 domain-containing protein TERM 875 1186820 - 1186789 - R 81 -6.4 -4.77036 | opp_overlap 1186790 1186794 1186819, overlap 1186794 GGGGATGACGAAAAA TGAAAGGGGCAGGG ATGA CCCTGCCCCTCGGT TGGCTACAGCCCGCT TERM 876 1186815 - 1186794 - R 100 -17.3 -4.35327 | opp_overlap 1186790 1186794, overlap 1186789 TGACGAAAAATGAAA GGGGCAGGG ATGA CCCTGCCCC TCGGTTGGCTACAGC TERM 877 1186794 - 1186815 + r 83 -17.3 -2.54896 | opp_overlap 1186794 1186789, overlap 1186790 TGACGAAAAATGAAA GGGGCAGGG ATGA CCCTGCCCC TCGGTTGGCTACAGC Caul_1120 1189652 - 1186824 - | TonB-dependent receptor TERM 878 1188949 - 1188960 + g 79 -7.2 -4.4078 | ATGTCGCGGTCATAG GCCC AGAG GGGC TTTTGATTGACGAAC Caul_1121 1189947 - 1190969 + | peptidase S51 dipeptidase E TERM 879 1191469 - 1191438 - g 71 -2.1 -4.65895 | gap 1, opp_overlap 1191453, overlap 1191439 GCGGTGATGGAAAAA TCACCG-CACGTGC TGCTG GCCCGCGACGGCGC TGATCAGTTCTCCAA Caul_1122 1191009 - 1192025 + | peptidase T2 asparaginase 2 Caul_1123 1192058 - 1192504 + | AsnC family transcriptional regulator Caul_1124 1192904 - 1192518 - | transposase IS4 family protein Caul_1125 1193254 - 1192901 - | transposase and inactivated derivative Caul_1126 1193469 - 1193804 + | AsnC family transcriptional regulator Caul_1127 1193902 - 1194924 + | hypothetical protein Caul_1128 1194924 - 1195958 + | mandelate racemase/muconate lactonizing protein Caul_1129 1196436 - 1195930 - | AsnC family transcriptional regulator TERM 880 1196799 - 1196763 - g 79 -18.8 -2.53263 | gap 1, opp_overlap 1196763 1196764 TCGATGGCGAACGCA TCGCC-GGCGTCGGCGT CCTG ACGCCCACGCCGGGCGA AAGGGTGATCGACGC Caul_1130 1196651 - 1198150 + | N-acyl-D-glutamate deacylase Caul_1131 1199481 - 1198246 - | putative 3-hydroxyphenylpropionic transporter MhpT TERM 881 1199409 - 1199395 - G 77 -11.4 -3.83026 | overlap 1199406 GGCCTGCAGATCAAA GCCCTC GAA GAGGGC CAGGGCGCAGCAGGC Caul_1132 1200420 - 1199590 - | p-hydroxycinnamoyl CoA hydratase/lyase Caul_1133 1201900 - 1200440 - | aldehyde dehydrogenase TERM 882 1201787 - 1201733 - G 90 -19.9 -3.17212 | gap 2, overlap 1201734 CGACCAGGCGACGAA GGCCGCCGCC-GCCGCGTCGAC-CGCG GCC CGCGCGTCGCCGGGGCTGGCGGCCGCG GCGCGGGTGGCGACC TERM 883 1201786 - 1201734 - G 95 -23.4 -2.50113 | gap 2, overlap 1201733 GACCAGGCGACGAAG GCCGCCGCC-GCCGCGTCGAC-CGCG GCC CGCGCGTCGCCGGGGCTGGCGGCCGC GGCGCGGGTGGCGAC TERM 884 1201957 - 1201975 + H 83 -4.6 -5.04597 | GGGTCCGGTTGATGA TTGATATG TGC CATAACAA TTTTTGTGTGTCACT Caul_1134 1202058 - 1202522 + | MarR family transcriptional regulator Caul_1135 1202642 - 1204195 + | AMP-dependent synthetase and ligase TERM 885 1204231 - 1204196 - T 100 -25.4 -3.32963 | overlap 1204199 AGCCCGACCTCATAA GATGGCCGGCGGCCCG AAGG CGGGCCGCCGGCCTCC ATACAGTTCAGGCCT TERM 886 1204228 - 1204199 - T 100 -27.9 -2.53822 | overlap 1204196 CCGACCTCATAAGAT GGCCGGCGGCCCG AAGG CGGGCCGCCGGCC TCCATACAGTTCAGG Caul_1136 1206547 - 1204250 - | TonB-dependent receptor Caul_1137 1206797 - 1207849 + | vanillate monooxygenase TERM 887 1208145 - 1208135 - g 83 -8.2 -4.56597 | CTCGCGGCCGAAAAA GGCG TGT CGCC GGAACGGCTGGCGGG Caul_1138 1207853 - 1208581 + | GntR family transcriptional regulator Caul_1139 1208594 - 1209598 + | oxidoreductase FAD/NAD(P)-binding subunit TERM 888 1209635 - 1209586 - T 82 -14.2 -3.36289 | opp_overlap 1209547 1209576, overlap 1209631 GACGACGCCAAGCAA GGCGTTTGGCTGAGCGGGGGGC GCGTGA ACCCCGATCTCAGCCAAGCGCC GCGCGTCGTCCTGGC Caul_1140 1210021 - 1209623 - | putative PAS/PAC sensor protein TERM 889 1211555 - 1211522 - g 90 -17.4 -3.4252 | overlap 1211541 GGTGACGCAGCAGAA CGCCGCGATGGTCG AAGAAG CGACCGCCGCGGCG TCCAACCTCAAGAGC Caul_1141 1210257 - 1211762 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 890 1213162 - 1213148 - g 81 -4.2 -4.84359 | CGATCTGGATAAAAA GGTTTG GGT CATACC GGCGACGCGCATGAA Caul_1142 1212375 - 1213574 + | integrase family protein Caul_1143 1213818 - 1213612 - | phage transcriptional regulator, AlpA TERM 891 1214286 - 1214240 - H 76 -7.5 -4.38712 | gap 1, opp_overlap 1214249, overlap 1214244 1214249 TTCATCGTCAGAAAA TTGACATAACCGATATCGCTTA TATA TAAGCGGTATCGGTTATGG-AG GCAATCATGCGATCT TERM 892 1214283 - 1214244 - H 90 -19.6 -2.80077 | opp_overlap 1214249, overlap 1214240 1214249 TCGTCAGAAAATTGA CATAACCGATATCGCTTA TATA TAAGCGGTATCGGTTATG GAGGCAATCATGCGA TERM 893 1214278 - 1214249 - H 81 -13.7 -3.60587 | opp_overlap 1214249, overlap 1214244 1214240 AGAAAATTGACATAA CCGATATCGCTTA TATA TAAGCGGTATCGG TTATGGAGGCAATCA TERM 894 1214249 - 1214278 + H 84 -15.9 -3.29144 | opp_overlap 1214244 1214240 1214249 AGAAAATTGACATAA CCGATATCGCTTA TATA TAAGCGGTATCGG TTATGGAGGCAATCA Caul_1144 1214293 - 1214811 + | hypothetical protein Caul_1145 1214808 - 1215269 + | hypothetical protein Caul_1146 1215269 - 1215610 + | ECF subfamily RNA polymerase sigma-24 factor Caul_1147 1215603 - 1216097 + | hypothetical protein Caul_1148 1216633 - 1216385 - | hypothetical protein TERM 895 1216466 - 1216434 - G 72 -4.8 -4.46212 | opp_overlap 1216460 CCGGTCAGCAGAAAA GCGTCATAGCC-GGCG TCA CGCCAAGCCTTG-CGC TGCACGTGGGTTGTC Caul_1149 1216857 - 1217219 + | XRE family transcriptional regulator TERM 896 1217232 - 1217272 + T 100 -17.6 -4.11216 | opp_overlap 1217214 1217225 TGAGGCAAGGCTCAG CGGTCCTCCGAGGCTGAG TGGGC CTCAGCCTCGAAGGCTCG TTTTCCGCCTCGCCG Caul_1150 1217458 - 1217228 - | conjugal transfer TraD family protein Caul_1151 1217798 - 1217532 - | hypothetical protein TERM 897 1218616 - 1218589 - g 74 -13.4 -3.27653 | gap 1, overlap 1218560 1218557 1218587 AGCCGCAGCACAAGA TCGGCCCGGCCGC TGG GCG-CAGGGCCGA CGAAGGCCTGGAGGC TERM 898 1218811 - 1218868 + G 70 -14.6 -2.71712 | opp_overlap 1218792 1218791, overlap 1218811 ACCGCGCCATGGGCG CGGTGCAGGCCTCGCCCGAACTTGTC GCTCTG GGCCAGGACGGGCGCGGCCAGGACCG CTTTACCAGCCGCGA Caul_1152 1217970 - 1220828 + | Ti-type conjugative transfer relaxase TraA Caul_1153 1220838 - 1221539 + | hypothetical protein Caul_1154 1221685 - 1222278 + | hypothetical protein Caul_1155 1222275 - 1223102 + | putative transcriptional regulator Caul_1156 1223105 - 1224013 + | hypothetical protein Caul_1157 1224350 - 1224030 - | XRE family transcriptional regulator TERM 899 1224416 - 1224380 - H 100 -25.3 -3.51329 | opp_overlap 1224374 TACGCTGAATCACAA TGGCCAGCAGCGCCC CGGGTTC GGGCGCTGCTGGCCA GCATACGATTTCGTA Caul_1158 1224518 - 1224739 + | hypothetical protein TERM 900 1224772 - 1224741 - f 71 -11.4 -3.53012 | opp_overlap 1224746, overlap 1224742 CTCCCCGTGGCTAAA TCGGGCGGGTCGCC CAGG GGCGACCCGTCCTT CACACCAGCGAGAAC TERM 901 1224771 - 1224742 - f 75 -14.9 -2.71712 | opp_overlap 1224746, overlap 1224741 TCCCCGTGGCTAAAT CGGGCGGGTCGCC CAGG GGCGACCCGTCCT TCACACCAGCGAGAA TERM 902 1224746 - 1224767 + F 84 -17.3 -2.70932 | opp_overlap 1224742 1224741 CGTGGCTAAATCGGG CGGGTCGCC CAGG GGCGACCCG TCCTTCACACCAGCG Caul_1159 1224793 - 1225701 + | hypothetical protein Caul_1160 1225841 - 1226329 + | hypothetical protein Caul_1161 1227498 - 1226587 - | hypothetical protein Caul_1162 1228108 - 1227539 - | adenylate kinase-like protein Caul_1163 1228527 - 1228105 - | hypothetical protein Caul_1164 1229560 - 1228505 - | hypothetical protein TERM 903 1229914 - 1229898 - H 73 -10.9 -3.64822 | AGGCTTTCACCTAAA CACGCTT TCC AAGCGTG CGCCATCAACCACTC Caul_1165 1230189 - 1230536 + | hypothetical protein Caul_1166 1231370 - 1230594 - | hypothetical protein Caul_1167 1232879 - 1231428 - | major facilitator transporter TERM 904 1232954 - 1232977 + r 93 -19.6 -3.0094 | GCCATGCGAGCGATT GGGACGCGCG CTAG CGCGCGTCCC TGTATGTCGCTAGAG Caul_1168 1233142 - 1232987 - | hypothetical protein Caul_1169 1233660 - 1233262 - | hypothetical protein Caul_1170 1234093 - 1233959 - | entericidin EcnAB TERM 905 1234264 - 1234220 - R 76 -8.5 -4.13767 | opp_overlap 1234220 1234236 1234263 CGCGGCATTCGAAAA CCTCGTCCTTCGACAAGCTCA GGA TGAGGTTTTCGAATGCCGGGG CCTGTAGATGGTCCT Caul_1171 1236442 - 1234337 - | glutaryl-7-aminocephalosporanic-acid acylase TERM 906 1236581 - 1236540 - R 79 -8.6 -4.25283 | overlap 1236522 AGGCTTGCACGAAAA CGGCG-AGCCAGCGCTGGGC GTCA GCCCT-CGCCGTCCGCGCCG CCGAATCCGTTCGCG Caul_1172 1236808 - 1236560 - | hypothetical protein Caul_1173 1237150 - 1237872 + | signal transduction histidine kinase Caul_1174 1238688 - 1238119 - | hypothetical protein Caul_1175 1238928 - 1238758 - | hypothetical protein TERM 907 1239102 - 1239056 - g 83 -20.2 -2.73468 | opp_overlap 1239078 CAAGACCTGGAACGA GGCCGAGCATGACCTGGTGGTC GGC GACTACCTGGTCATGCTCGACA AGGCGATGACCGGTC TERM 908 1239335 - 1239373 + G 72 -13.7 -3.21276 | gap 1, opp_overlap 1239332, overlap 1239333 CGCGCTCAAGGATTT GGCCCAGCCGC-CGGCCC TGCT GGGCCGCGCCGCCGCGCC TGTTCTGGCCGAGGG Caul_1176 1238943 - 1239851 + | hypothetical protein Caul_1177 1240512 - 1239889 - | glutathione S-transferase domain-containing protein TERM 909 1240654 - 1240664 + G 72 -8.2 -3.96216 | opp_overlap 1240647, overlap 1240626 GCCGACAAGGCGTGA CGCG GGC CGCG TTGTTTGGCTCGACG Caul_1178 1240587 - 1240883 + | DNA polymerase beta subunit Caul_1179 1240864 - 1241253 + | hypothetical protein Caul_1180 1242889 - 1241264 - | FAD dependent oxidoreductase TERM 910 1241364 - 1241388 + g 74 -14.9 -3.05343 | GCATAGCCCGCGCCC TCGCCGGCCGG GAA CAGGCCGGCGG TGTTGAGGCTCTGGA Caul_1181 1244721 - 1242913 - | GTP-binding protein LepA TERM 911 1243891 - 1243914 + g 73 -12.4 -3.43071 | CTCGTCGGTGATGGT GTCGCCGACG GCGG CGTCGGCCAC TTCCTTGATCTGGGC Caul_1182 1244876 - 1245481 + | hypothetical protein TERM 912 1245657 - 1245679 + T 71 -5.4 -4.53163 | opp_overlap 1245649, overlap 1245659 CGGAAAGGGCCGCGG AGCGCCGGAC GAC GTCCGGAGTG TTTTCTAATGTGTAC TERM 913 1245659 - 1245677 + T 76 -10.2 -3.86973 | opp_overlap 1245649, overlap 1245657 GAAAGGGCCGCGGAG CGCCGGAC GAC GTCCGGAG TGTTTTCTAATGTGT Caul_1183 1247408 - 1246635 - | transglutaminase domain-containing protein Caul_1184 1248118 - 1247507 - | peptide methionine sulfoxide reductase Caul_1185 1248431 - 1248177 - | hypothetical protein Caul_1186 1248724 - 1248428 - | hypothetical protein TERM 914 1248813 - 1248790 - R 100 -11.7 -4.80882 | opp_overlap 1248789 1248790 ACCGCACAGCAAAAA CCCCGCTCC TGGTGG GAAGCGGGG CTTTGCGGATCTTGC Caul_1187 1248997 - 1248851 - | hypothetical protein TERM 915 1248877 - 1248894 + g 88 -11.3 -4.43012 | CGCGCCTGTGCTGCC CCGTTCG CACA CGAACGG TTTTAATCTTGGCCT TERM 916 1249207 - 1249171 - R 71 -11.5 -3.53012 | TCGTCTTCCCCCAAA GGGGGAAGAGCCTTC CGCGCGC GAGGGCTCCGCCCCC TATGGGGGCGGACAG Caul_1188 1251699 - 1249261 - | phenylalanyl-tRNA synthetase subunit beta Caul_1189 1251958 - 1251731 - | hypothetical protein Caul_1190 1253046 - 1251958 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 917 1252798 - 1252825 + g 76 -13.4 -3.50853 | overlap 1252794 1252793 1252801 GGCCAGGCGCGCGTC GAGGGCGGCGGT TTCC AGCGCCGCCTTC TTGTCGTTCAGCGCC TERM 918 1252801 - 1252822 + g 77 -11.5 -3.8917 | overlap 1252794 1252793 1252798 CAGGCGCGCGTCGAG GGCGGCGGT TTCC AGCGCCGCC TTCTTGTCGTTCAGC TERM 919 1253105 - 1253128 + r 90 -18.2 -3.05963 | opp_overlap 1253105 AGCGCGCAGCAAAAA GCCCTCCGGT TCGC ACCGGAGGGC TCTTCAGATCGCAAT TERM 920 1253128 - 1253105 - R 100 -18.2 -4.7254 | opp_overlap 1253105 AGCGCGCAGCAAAAA GCCCTCCGGT TCGC ACCGGAGGGC TCTTCAGATCGCAAT Caul_1191 1253526 - 1253167 - | 50S ribosomal protein L20 Caul_1192 1253740 - 1253540 - | 50S ribosomal protein L35 TERM 921 1253657 - 1253671 + g 73 -12.8 -3.53091 | opp_overlap 1253646, overlap 1253659 CAGACGGTGACGCTT GCCGGC GAC GCCGGC TTTCAGCAGGCCCGT TERM 922 1253863 - 1253896 + r 73 -8.1 -4.07885 | gap 1, opp_overlap 1253847, overlap 1253847 1253866 1253869 GCGGGGGGAAAGCAA GAGCGACCC-CCGCGC CTA GTTCGGCGGGTTGTTC TTTTCCAGGAAGGTG Caul_1193 1255806 - 1253878 - | peptidase S9 prolyl oligopeptidase Caul_1194 1257114 - 1255864 - | major facilitator transporter Caul_1195 1259136 - 1257199 - | peptidase S9 prolyl oligopeptidase TERM 923 1258716 - 1258744 + g 71 -11 -3.61398 | opp_overlap 1258700, overlap 1258700 GCACATCCGGGGTCT CCAGGATGACGT TCATC GCGTCTTCCTGG TTCTTGAGCAGCGGA TERM 924 1259121 - 1259102 - G 75 -9.2 -4.13767 | opp_overlap 1259100 CCGGCCATGGCAAAA CTCGCCGC CACG GCGGCCAG AATGGTTCTCAACAC TERM 925 1259340 - 1259305 - R 93 -19.8 -2.95192 | opp_overlap 1259310 1259311, overlap 1259311 CCCAACGCCAGAAAC GAAAAACGCCCCGCCT GTGA AGGCGGGGCGCTTTGC ATCGCGGGGCTGGAG TERM 926 1259310 - 1259335 + r 91 -16.1 -3.64703 | opp_overlap 1259305 1259311, overlap 1259311 CGCCAGAAACGAAAA ACGCCCCGCCT GTGA AGGCGGGGCGC TTTGCATCGCGGGGC TERM 927 1259334 - 1259311 - R 100 -19.6 -5.04601 | opp_overlap 1259311 1259310, overlap 1259305 GCCAGAAACGAAAAA CGCCCCGCCT GTGA AGGCGGGGCG CTTTGCATCGCGGGG TERM 928 1259311 - 1259334 + r 90 -19.6 -2.78679 | opp_overlap 1259305 1259311, overlap 1259310 GCCAGAAACGAAAAA CGCCCCGCCT GTGA AGGCGGGGCG CTTTGCATCGCGGGG Caul_1196 1259888 - 1259367 - | translation initiation factor IF-3 Caul_1197 1261188 - 1260217 - | glycosyl transferase family protein Caul_1198 1262351 - 1261185 - | glycosyl transferase group 1 TERM 929 1261779 - 1261769 - G 72 -8.2 -4.07568 | GGTCCTCGGGCAAAA CGCC CCA GGCG TCGCGCAGCGCCTTG Caul_1199 1262408 - 1263280 + | alpha/beta hydrolase fold Caul_1200 1264465 - 1263581 - | NAD-dependent epimerase/dehydratase TERM 930 1264524 - 1264542 + H 74 -10.2 -3.72576 | opp_overlap 1264511 1264486, overlap 1264525 CAGGCGTTCGCGCAA CCCCCTCC GCC GGAGGGGC TTTCATCCCCAGCAA TERM 931 1264525 - 1264541 + H 74 -13.7 -2.83403 | opp_overlap 1264511 1264486, overlap 1264524 AGGCGTTCGCGCAAC CCCCTCC GCC GGAGGGG CTTTCATCCCCAGCA Caul_1201 1264970 - 1265575 + | hypothetical protein Caul_1202 1265652 - 1267406 + | hypothetical protein TERM 932 1267431 - 1267420 - f 86 -7.2 -4.80882 | AGTGTACAGCAAAAA GGCC TCGA GGCC TCCATGCCCGTTTGG Caul_1203 1267599 - 1267985 + | hypothetical protein Caul_1204 1267982 - 1268695 + | hypothetical protein Caul_1205 1269235 - 1268783 - | hypothetical protein TERM 933 1268824 - 1268849 + g 73 -7.6 -4.18018 | gap 1 CGCGCATCTGGTCGT GGCC-GGACTT GACCG AGGTCCAGGCC TTTTCGATCGCGGCG Caul_1206 1269632 - 1269300 - | hypothetical protein TERM 934 1269596 - 1269579 - G 70 -12.7 -3.30771 | GGACAGGCTGGACAA CAGGCCC TGCC GGGCCTG GGCGGGCGTGCCGTA TERM 935 1269727 - 1269748 + r 83 -14.4 -3.53012 | opp_overlap 1269727 GCCAGTCACGAAAAA GGCCGGGG ATCGCG CCCCGGCC TTTCCGCGCCCAGGC TERM 936 1269748 - 1269727 - R 100 -14.4 -4.7497 | opp_overlap 1269727 GCCAGTCACGAAAAA GGCCGGGG ATCGCG CCCCGGCC TTTCCGCGCCCAGGC Caul_1207 1271269 - 1269773 - | phosphoglucomutase/phosphomannomutase alpha/beta/subunit Caul_1208 1272340 - 1271369 - | KpsF/GutQ family protein TERM 937 1271409 - 1271423 + g 72 -3.4 -4.63218 | opp_overlap 1271410 1271411, overlap 1271410 1271411 TCGTGCACGTGCAGA ATGCCC ACC GGGCGG TTTTGTTCGACCACG Caul_1209 1272573 - 1272337 - | hypothetical protein Caul_1210 1272719 - 1273432 + | phosphoglycerate mutase 1 family protein Caul_1211 1273555 - 1274814 + | pentapeptide repeat-containing protein TERM 938 1275424 - 1275440 + G 74 -12.3 -3.54741 | CAGTTCGCCGGCGTC TCGGCCT TCA AGGCCGA TTTCAGCGACTGCTC Caul_1212 1274932 - 1276194 + | pentapeptide repeat-containing protein Caul_1213 1276282 - 1277379 + | hypothetical protein TERM 939 1277455 - 1277432 - T 100 -21 -3.9461 | GTCGCCCAAGAAGAA GGGCGGCGCG TCGC CGCGCCGCCC TGAAGAGGCTGGAGG Caul_1214 1277958 - 1277491 - | heat shock protein Hsp20 TERM 940 1277706 - 1277752 + g 75 -5.7 -4.42238 | overlap 1277707 1277734 CGCGATGGAGGTAGC GCTTGGCCTCGTCATTGGCCG GCTTG CGGCCGGTGACGGTGAGAAGG TTTTCCTTCACCTCG Caul_1215 1278195 - 1279037 + | hypothetical protein TERM 941 1279570 - 1279615 + G 73 -9.5 -3.87373 | CACCGCCTTCGGGCC CAGCAGCGGCCCGGTGGCGCC GGCC GGTTCCGCCGACCTGGTGCTG TTTCTGCGCAATCTG Caul_1216 1279145 - 1280011 + | hypothetical protein TERM 942 1280308 - 1280251 - g 70 -15.6 -2.72144 | gap 3, overlap 1280250 CGACCGGCGTGAAAG CGACGCTGGTCGAGGCGAACGGC-GCGCG CAC CGCGCTGCCGATCGAC--GACCAGGGCCG CTTCGAGCGCCTGCC Caul_1217 1280034 - 1280705 + | hypothetical protein Caul_1218 1280797 - 1281105 + | sterol-binding domain-containing protein TERM 943 1281182 - 1281212 + G 100 -20.5 -4.67048 | gap 1 AGGCTGAATGGTTCA GCGGCGCGGACGGG GCGA CCC-TCCGCGCCGC TTTCTTTTCGCCTGA TERM 944 1281542 - 1281554 + G 71 -2.6 -4.56775 | TGCTGGCCCTGGCCA TGGG CGAGA CCCG TTTTTCCGCCGCGGT Caul_1219 1281109 - 1282071 + | alpha/beta hydrolase fold TERM 945 1282106 - 1282073 - T 85 -15.3 -3.53012 | opp_overlap 1282062 1282073 GCGGTGTTCTCTAAA TCCGCTCATGCTGGC GAAC GCCGGGATGAGCGGA TCTATAGGGCGGCCT TERM 946 1282073 - 1282106 + T 87 -17.5 -2.87211 | opp_overlap 1282073, overlap 1282062 GCGGTGTTCTCTAAA TCCGCTCATGCTGGC GAAC GCCGGGATGAGCGGA TCTATAGGGCGGCCT Caul_1220 1282957 - 1282121 - | histidinol-phosphate phosphatase Caul_1221 1283398 - 1283015 - | XRE family transcriptional regulator Caul_1222 1283540 - 1284466 + | lipid A biosynthesis acyltransferase Caul_1223 1285030 - 1284527 - | response regulator receiver protein TERM 947 1285023 - 1285005 - G 70 -4.4 -4.4891 | overlap 1285006 1285009 TCCACCAGCAGAAAA CGCAGCTG CTC CAGCGCCG CAGACATGCAGGCCG Caul_1224 1285830 - 1285132 - | peptidase M23B Caul_1225 1286192 - 1285971 - | hypothetical protein Caul_1226 1287859 - 1286273 - | exodeoxyribonuclease VII, large subunit TERM 948 1288002 - 1287982 - H 71 -12.5 -3.02649 | opp_overlap 1287983 ACCTCACGAGACAGA TGCTCCCCC TCT GGGGGAGCT GTCTCGGAGCGACTG TERM 949 1287983 - 1288001 + H 83 -16 -2.87211 | opp_overlap 1287982 CCTCACGAGACAGAT GCTCCCCC TCT GGGGGAGC TGTCTCGGAGCGACT Caul_1227 1289264 - 1289629 + | hypothetical protein TERM 950 1289783 - 1289795 + T 91 -9.1 -4.52589 | opp_overlap 1289781 GGTGGACTTAACAGG GCGGT GAT ACCGC TTTTGTCTCAGGAAC TERM 951 1289910 - 1289886 - T 71 -4.9 -4.42653 | overlap 1289903 AGGCCAGGGAGAAAA GCGACCTGTCC GAC GAAGAGGTAGC CTCCGCGTCACATTT TERM 952 1290214 - 1290177 - T 100 -22.9 -3.06696 | opp_overlap 1290182, overlap 1290180 CCCCGGCTCAACACA CAAGATCCCGGACAGCC TCTC GGCCATCCGGGATCTTG CAGGTCTCGCCGTCG TERM 953 1290211 - 1290180 - T 100 -18.8 -3.68024 | opp_overlap 1290182, overlap 1290177 CGGCTCAACACACAA GATCCCGGACAGCC TCTC GGCCATCCGGGATC TTGCAGGTCTCGCCG Caul_1228 1290861 - 1290343 - | GcrA cell cycle regulator TERM 954 1290921 - 1290886 - H 93 -7.4 -5.00616 | TCCGCCTCTAAAAAA GGACTCTGGCGTGTCT CCCC AGACTCGCCCTAGACC CCACATCTGGTATAC Caul_1229 1291109 - 1291930 + | ABC-2 type transporter Caul_1230 1292253 - 1292930 + | periplasmic protein-like protein TERM 955 1293045 - 1293075 + F 89 -11 -4.32046 | opp_overlap 1293034, overlap 1293048 ACAACGCTGGGCCTT CCGGTCCCCGCGCT TCC AGCGCGGGGGCTTC TTTCCTTTTTGGGAG TERM 956 1293048 - 1293072 + F 100 -19.3 -4.26386 | opp_overlap 1293034, overlap 1293045 ACGCTGGGCCTTCCG GTCCCCGCGCT TCC AGCGCGGGGGC TTCTTTCCTTTTTGG TERM 957 1294325 - 1294279 - g 81 -7.8 -4.62471 | opp_overlap 1294278 1294279, overlap 1294281 GCCAAGCTGGAAAAA GCTTGCGAGGCTGCTCGGGCCA AGG CGGCCTGAGGATACCCGCAACC GTTTCCTCGCCCTTC Caul_1231 1293097 - 1294311 + | acetylornithine and succinylornithine aminotransferase Caul_1232 1294433 - 1295368 + | ornithine carbamoyltransferase TERM 958 1295439 - 1295411 - g 72 -5.1 -4.46072 | opp_overlap 1295422, overlap 1295405 TTCAACAAACAGAAA CGCGACGCCTTGC TCG ACAAGCTGACGCG CTATCTGGACCGCGA Caul_1233 1295381 - 1295620 + | hypothetical protein Caul_1234 1295796 - 1296713 + | Hsp33-like chaperonin Caul_1235 1297777 - 1296839 - | rhodanese domain-containing protein Caul_1236 1298582 - 1298157 - | Fe-S metabolism associated SufE Caul_1237 1299485 - 1298622 - | histidine kinase TERM 959 1300400 - 1300345 - g 72 -13.8 -3.15544 | gap 1, overlap 1300357 GGTGATCTCGAGCAA TGGCC-GGATCAAGACCGTGCGCGGCG CCG CGCCGCGCGGCGTCGCGACCCTGGCCC TGACCAGCGAAGGCC TERM 960 1300399 - 1300357 - g 77 -15.5 -3.14881 | gap 2, overlap 1300345 CAATGGCCGGATCAA GACC-GTG-CGCGGCGCCGCG CCG CGCGGCGTCGCGACCCTGGCC CTGACCAGCGAAGGC TERM 961 1300501 - 1300450 - g 79 -15 -3.31144 | gap 1, opp_overlap 1300456 CGGCGACCGTCAGAA GGTCAGCGCCGCCCTGGTCGCCGCC CTC GACGGCGGCGAGGCCAGCG-TGTCC TTCGCCCCCCTGCTG TERM 962 1300456 - 1300496 + G 72 -14.5 -2.90075 | opp_overlap 1300450 CCGTCAGAAGGTCAG CGCCGCCCTGGTCGCCGCC CTC GACGGCGGCGAGGCCAGCG TGTCCTTCGCCCCCC Caul_1238 1299695 - 1301434 + | multi-sensor signal transduction histidine kinase Caul_1239 1302337 - 1301474 - | hypothetical protein TERM 963 1302340 - 1302353 + H 76 -8.1 -4.18934 | GCCACCGCGCCATCC GACCC CCAA GGGTC TTTCTTGACGTCATC Caul_1240 1302437 - 1302778 + | hypothetical protein Caul_1241 1304833 - 1302938 - | signal transduction histidine kinase TERM 964 1303191 - 1303215 + g 71 -11.3 -3.55622 | overlap 1303192 CCGGTCGGCCCGATC ACCTGGGCGCC CGC GGCGGCCAGGA TTTGGGCCAGTTCCA TERM 965 1303192 - 1303214 + g 70 -14.8 -2.73159 | overlap 1303191 CGGTCGGCCCGATCA CCTGGGCGCC CGC GGCGGCCAGG ATTTGGGCCAGTTCC Caul_1242 1305754 - 1305014 - | hypothetical protein Caul_1243 1305957 - 1306337 + | hypothetical protein Caul_1244 1306524 - 1306378 - | hypothetical protein Caul_1245 1306754 - 1308355 + | peptide chain release factor 3 Caul_1246 1308490 - 1309680 + | hypothetical protein Caul_1247 1309677 - 1310246 + | hypothetical protein Caul_1248 1310321 - 1310701 + | methylglyoxal synthase Caul_1249 1311460 - 1310714 - | hypothetical protein TERM 966 1311209 - 1311239 + g 72 -4.7 -4.41348 | gap 2 GTTCTTGCCGTCGAT GGTGTCGAGCGGAAC CTG GTT-CGCCCG-CGCC TTTCTTTCGGCCCGA Caul_1250 1312593 - 1311478 - | hypothetical protein Caul_1251 1313181 - 1312711 - | hypothetical protein Caul_1252 1313203 - 1313745 + | hypothetical protein TERM 967 1314473 - 1314437 - g 77 -10.8 -3.88618 | gap 2, opp_overlap 1314441, overlap 1314426 AACACAAGCATGAAA GCCTG-GCCGCC-GCCCG CTG CGAGCAGGCGACGCTGGC CGTGCTGGGCGCCGA TERM 968 1315488 - 1315460 - g 78 -13.2 -3.53811 | gap 1 CTCAGGGGTTGCAAA GGGTCAAGCAGGC GCAC GCC-GCCTGACCC AGAATGAAACGGGCC Caul_1253 1314109 - 1315485 + | hypothetical protein Caul_1254 1315547 - 1315849 + | hypothetical protein Caul_1255 1316398 - 1315856 - | hypothetical protein TERM 969 1316365 - 1316376 + g 73 -7.2 -4.18465 | TCGCGACGACGCCGA CGGC CAAG GCCG TTCTATTTTTTGACA Caul_1256 1316824 - 1316687 - | hypothetical protein Caul_1257 1317186 - 1316827 - | hypothetical protein Caul_1258 1318357 - 1317266 - | hypothetical protein Caul_1259 1319088 - 1318354 - | hypothetical protein Caul_1260 1319940 - 1319182 - | binding-protein-dependent transport systems inner membrane component TERM 970 1319754 - 1319716 - G 85 -18.1 -3.21416 | gap 1, opp_overlap 1319748 GAGGCTGACCAGCAA GGCCAGGCCGCAGGCCAG GGCG CTGGCCAG-GGCCAGGCC GACCAGGGCGGTCGA Caul_1261 1320754 - 1319981 - | ABC transporter related TERM 971 1320807 - 1320758 - R 73 -2.8 -4.72272 | gap 3, opp_overlap 1320786, overlap 1320759 1320760 1320793 GGGGCGGAGCAAAAA CGGCTGTCA-TCCCGGACGAGCGCG TAG CGCGAAGATCCGGGACCGAC-GC-G TGAACTCGGCGCTTC TERM 972 1320786 - 1320842 + r 83 -12.7 -3.90112 | opp_overlap 1320760 1320758 1320759 1320793 GGACGAGCGCGTAGC GCGAAGATCCGGGACCGACGCGTGAAC TCG GCGCTTCCGGCGGTCCCGGACCTGCGC TTTGCTTGCCCGGGA Caul_1262 1321865 - 1320885 - | NMT1/THI5-like domain-containing protein Caul_1263 1324148 - 1322085 - | integral membrane sensor hybrid histidine kinase Caul_1264 1325535 - 1324258 - | sodium/hydrogen exchanger TERM 973 1325602 - 1325585 - H 71 -12.7 -3.05463 | opp_overlap 1325584 1325583 1325593 ACGCCGTCGACCGAA CCCAGCG GCGG CGCTGGG CGTTGTGTTCCCGAG Caul_1265 1325630 - 1326118 + | hypothetical protein Caul_1266 1326599 - 1326288 - | hypothetical protein Caul_1267 1326725 - 1326937 + | hypothetical protein Caul_1268 1326969 - 1327982 + | mandelate racemase/muconate lactonizing protein Caul_1269 1329052 - 1328096 - | HxlR family transcriptional regulator Caul_1270 1329189 - 1330409 + | acetyl-CoA acetyltransferase Caul_1271 1330590 - 1331378 + | hypothetical protein TERM 974 1331415 - 1331471 + T 89 -17.4 -3.20723 | gap 2, opp_overlap 1331406, overlap 1331420 1331438 GGACAAGCGCGTAGC GCGCCGATCCGGGACCGACCCCCGAG CTCAGCA CTTTGGGG-CGGTCCCGGATCT-CGC TTCGCTTCGTCCGGG TERM 975 1331420 - 1331467 + T 90 -20 -2.57489 | gap 1, overlap 1331415 1331438 AGCGCGTAGCGCGCC GATCCGGGACCGACCCCCGAG CTCAGCA CTTTGGGG-CGGTCCCGGATC TCGCTTCGCTTCGTC Caul_1272 1332958 - 1331495 - | carotenoid oxygenase TERM 976 1333060 - 1333043 - H 74 -10.5 -3.68619 | opp_overlap 1333042 1333043 TGCAAGTGACGGAAA GGCGCGC GGAC GCGCACC GGCGCCGTTCTTCCG TERM 977 1333994 - 1333948 - g 82 -17.3 -3.02511 | gap 1 GCGACCTGTTCAACA GCTCGGTCGCGGTGGCGGCCGA TCGC TCGGCCACCACCCCGGCCAA-C AGCCAGGACAAGACC TERM 978 1334028 - 1334006 - g 82 -14.8 -3.44206 | CAACAGCCAGGACAA GACCCCGGCC ACC GGCTGGGGTC TGAACGGCGCCCTGC Caul_1273 1333128 - 1335125 + | TonB-dependent receptor Caul_1274 1336359 - 1335247 - | ErfK/YbiS/YcfS/YnhG family protein TERM 979 1336250 - 1336270 + g 81 -10.3 -4.25104 | GGGGCTGGAGCCGCC GCCGGCTTC GAC GCGGCCGGC TTTTCCTGGGGGGGC TERM 980 1337111 - 1337149 + Gr 82 -3.7 -5.07107 | gap 1, overlap 1337112 1337112 TGGTCGCCGAGGCCA AGG-CGGCGGGCGTGG TGCGCGAT CCGCGCGCGCTGACCA TTTTTTCCGGCTTTC Caul_1276 1340017 - 1337501 - | hypothetical protein Caul_1275 1336453 - 1337607 + | peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin TERM 981 1339298 - 1339268 - GT 86 -16.1 -3.14344 | gap 1 CAGCTGGTCGATCAA CCGCCGCG-CGCCG GGCG CGGCGTCGAGGCGG TCGCGGGCTTCGAGG Caul_1277 1340721 - 1340017 - | ABC transporter related Caul_1278 1340779 - 1341450 + | GDSL family lipase Caul_1279 1342552 - 1341443 - | hypothetical protein TERM 982 1342634 - 1342656 + r 93 -16.3 -3.76125 | opp_overlap 1342634 CAAGCCAAAAATAAA CCCCTCGCC GCTGG GGCGAGGGG TTTGGCTTAGCGTCG TERM 983 1342656 - 1342634 - R 100 -16.3 -4.91473 | opp_overlap 1342634 CAAGCCAAAAATAAA CCCCTCGCC GCTGG GGCGAGGGG TTTGGCTTAGCGTCG Caul_1280 1345801 - 1342688 - | acriflavin resistance protein TERM 984 1344798 - 1344825 + g 70 -12.1 -3.27489 | overlap 1344796 CCCAGTCCCAGGGCC TCGAGCGAAGC GTAGTA GCTTTGCTCGA TATATTTCACGTTCG Caul_1281 1346971 - 1345811 - | RND family efflux transporter MFP subunit Caul_1282 1348214 - 1347156 - | aldo/keto reductase Caul_1283 1349402 - 1348404 - | glycoside hydrolase family protein Caul_1284 1350311 - 1349487 - | GntR domain-containing protein TERM 985 1350354 - 1350329 - R 100 -18.3 -4.00934 | opp_overlap 1350328 ATGTCAAAGACGAAA CCCCGCCACGG CGGA CCGTGACGGGG CTCGGTTCAGGCGCG Caul_1285 1351960 - 1350392 - | SSS family solute/sodium (Na+) symporter Caul_1286 1352638 - 1352009 - | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase TERM 986 1352607 - 1352618 + g 73 -7.2 -4.19704 | overlap 1352606 AGGATCGCGACGATG GGCG GAGC CGCC TTTTGACTGGGGTTA Caul_1287 1353581 - 1352631 - | 2-dehydro-3-deoxygalactonokinase Caul_1288 1355317 - 1353581 - | dihydroxy-acid dehydratase TERM 987 1355731 - 1355699 - g 81 -12.6 -3.92542 | CTCAGGCGCAAACAA CCGCGCCGGCGTCG TCGGC CGACACCGTCGAGG AAGTCGTCGTCACCG Caul_1289 1355602 - 1358538 + | TonB-dependent receptor TERM 988 1358563 - 1358607 + F 100 -20.7 -4.91109 | CGCGAGCCTTGAGCA GGTCCTCGTTCCGGCCCGG CCCCAAA CCGGGTCGGGGCGGGGGCC TTTTTGTCGTCGCGC Caul_1290 1358678 - 1360189 + | tryptophan halogenase Caul_1291 1360330 - 1361994 + | glycoside hydrolase family protein TERM 989 1362084 - 1362073 - f 73 -3.6 -4.77165 | GCGCCCACAACAAAA CCCA CTGA CGGG GACTATTCGATGCAC TERM 990 1362711 - 1362687 - g 73 -7.9 -4.17048 | gap 1, opp_overlap 1362686, overlap 1362666 TCTCTGGGAAAACAA CGGGATCACC CGCTTC GGTGA-CCCG ACGCCCTATGACCTC TERM 991 1364123 - 1364107 - g 71 -11.5 -3.57213 | overlap 1364108 TACACCAACAAGGAA CCGGCCC ACT GGGCCGA ATGGCAGGAGCTGAA Caul_1292 1362094 - 1364928 + | glycoside hydrolase family protein TERM 992 1364972 - 1364952 - T 81 -12.5 -3.75332 | overlap 1364953 ATTGGCCAATCGAAA GCCTCCCCC TGT GGGGGAGGT GTCGGCGAAGCCGAC TERM 993 1364971 - 1364953 - T 83 -16 -2.84878 | overlap 1364952 TTGGCCAATCGAAAG CCTCCCCC TGT GGGGGAGG TGTCGGCGAAGCCGA TERM 994 1365066 - 1365086 + T 100 -18.3 -3.96624 | GATCGCTTCGCGATC GCCTCCCCC ACA GGGGGAGGC TTTGTCCTAAGCCTG Caul_1293 1365758 - 1365093 - | peptidase M23B Caul_1294 1366475 - 1365891 - | hypothetical protein TERM 995 1366476 - 1366486 + r 72 -2.4 -4.68593 | TCTCAGGACACGCAT GGCG GGG CGGC TTTTTGCATCATGAC Caul_1295 1368304 - 1366640 - | urocanate hydratase Caul_1296 1369241 - 1368429 - | N-formylglutamate amidohydrolase Caul_1297 1370907 - 1369372 - | histidine ammonia-lyase Caul_1298 1372113 - 1370908 - | imidazolonepropionase TERM 996 1371489 - 1371463 - G 79 -10.8 -4.07568 | overlap 1371481 CTGGGCGCGGGAAAA GCCGATGCCCTC GCA GAAGGCGTCGAC CGCGTCGGCCAGGCC Caul_1299 1372200 - 1373675 + | N-formimino-L-glutamate deiminase Caul_1300 1373672 - 1374385 + | histidine utilization repressor Caul_1301 1374580 - 1374389 - | hypothetical protein TERM 997 1374657 - 1374636 - R 75 -12.3 -3.61178 | CTCATGGACCGCAAA CTTGCCACC ACCT GGCGGCAAG GGGTTACACCAAACC Caul_1302 1376283 - 1374661 - | glycoside hydrolase family alpha-L-fucosidase TERM 998 1376405 - 1376369 - H 71 -12.9 -2.99471 | GGACGCCGAGATAGA CGCGGCCGAACCGGC TGGGGTC GCCGGTCAGGGCGCG CGGTTCGGCGAAGCC Caul_1303 1376672 - 1379152 + | glycoside hydrolase family 3 protein TERM 999 1379251 - 1379197 - f 73 -12.8 -3.1355 | GGGACCCAGATGGAA TGGCTTTGAGGCTGACGCCAAGGGCT TTG AGCCCTTCAAATCAGCCTCCCCGCCA TGGGATCTGGGTCCA Caul_1304 1379308 - 1381239 + | protein of unknown function DUF303 acetylesterase putative Caul_1305 1381338 - 1381523 + | hypothetical protein Caul_1306 1381953 - 1381504 - | MarR family transcriptional regulator TERM 1000 1381925 - 1381890 - G 73 -9.7 -3.91352 | gap 1, opp_overlap 1381880 AGAGGGCGAAGCAAA GC-TGACGGTCGAGGC GCAGG GCCTCGACCGTGTCGC TGCTGGCTGTGTTGG Caul_1307 1382366 - 1381950 - | OsmC family protein TERM 1001 1382470 - 1382511 + r 76 -15.4 -2.52543 | gap 2 GATCTTTTTCTCCAC G--CAGTCATCCCGGACGAG CGCG CTTGTCCGGGATGACTGGAC TGGGTTAGGCGACCT Caul_1308 1382992 - 1382516 - | hypothetical protein TERM 1002 1383193 - 1383161 - R 76 -9.8 -3.90316 | opp_overlap 1383164, overlap 1383159 1383187 ACCGCCGCAAAAATA GCCCTCATCCTGAG CTTGT CGAAGGACGAGGGC GGCTCCTCGGCGATC Caul_1309 1383933 - 1383232 - | heat shock protein DnaJ domain-containing protein TERM 1003 1383952 - 1383912 - G 82 -16 -3.39327 | opp_overlap 1383912 CGTGGAGACTGAGAA CGGGGGAAGCGCCGGCGG TCATG CCGCCGACCCTGCCGCCG TTTGGTCAACGAGGC TERM 1004 1383912 - 1383952 + g 88 -14.5 -3.72576 | opp_overlap 1383912 CGTGGAGACTGAGAA CGGGGGAAGCGCCGGCGGT CAT GCCGCCGACCCTGCCGCCG TTTGGTCAACGAGGC Caul_1310 1384335 - 1383994 - | hypothetical protein TERM 1005 1384665 - 1384706 + G 76 -7.3 -4.27117 | gap 1 GCCAACGGCCTGCCG GACTCGCGCAT-GGTGCT GCTCAAG AGCGTCGATGCGCGGGGC TTTGTCTTCTACACC Caul_1311 1384428 - 1385129 + | pyridoxamine 5'-phosphate oxidase Caul_1312 1385750 - 1385130 - | TetR family transcriptional regulator TERM 1006 1385478 - 1385427 - G 74 -12.8 -3.62096 | gap 1, overlap 1385429 GGTGACCATCCGAAA CATCGCCCGGGCCGCCGGCCGCGCC ATG AACGCGGTATA-GGCCCGGGCGAAG GCCGTCAGGCGGGCG TERM 1007 1385476 - 1385429 - G 74 -14 -3.39018 | gap 1, overlap 1385427 TGACCATCCGAAACA TCGCCCGGGCCGCCGGCCGCGCC ATG AACGCGGTATA-GGCCCGGGCGA AGGCCGTCAGGCGGG Caul_1313 1385893 - 1387392 + | hypothetical protein Caul_1314 1389239 - 1387518 - | integral membrane sensor hybrid histidine kinase TERM 1008 1390201 - 1390222 + G 70 -12.3 -3.28791 | gap 1 GGTGCCGATGTTCCA CGCCAACGCC TGG GGCG-TGGCG TTCTCGGCGCCCGGT Caul_1315 1389485 - 1392382 + | AMP-dependent synthetase and ligase Caul_1316 1393287 - 1392394 - | beta-lactamase domain-containing protein TERM 1009 1392777 - 1392793 + g 77 -4.4 -4.78572 | gap 1 AGCCCATGACGTGGT CGCCGCT GAAC AG-GGCG TTTTCTTCCTTCAGG Caul_1317 1393365 - 1393517 + | hypothetical protein Caul_1318 1393940 - 1393530 - | hypothetical protein TERM 1010 1394067 - 1394051 - H 72 -7.9 -4.10855 | AAAATGTGTCGAAAA TCCGCGC AGA GAGCGGA GAGATATCCTCCAAT Caul_1319 1394550 - 1397750 + | TonB-dependent receptor plug TERM 1011 1397778 - 1397801 + T 100 -19.6 -5.27335 | opp_overlap 1397775 GAATAGACGGAATGG CGGCGGGCTC CTCG GAGCCCGCCG TTTTTCTTTGGGCGC TERM 1012 1398319 - 1398295 - T 76 -6.4 -4.53163 | gap 2, overlap 1398299 GTACACACTACAAAA GCTACTCCGGGC GAG GCCCGG-GC-GC TTCGCACCCTTCCCA TERM 1013 1398404 - 1398384 - T 76 -12.5 -3.53012 | overlap 1398385 CCGTGTGTCCGTAAA GCCTCCCCC TGT GGGGGAGGT GTCGCCTGACGGGCG TERM 1014 1398403 - 1398385 - T 81 -16 -2.71712 | overlap 1398384 CGTGTGTCCGTAAAG CCTCCCCC TGT GGGGGAGG TGTCGCCTGACGGGC TERM 1015 1398581 - 1398564 - T 77 -14.1 -3.30124 | overlap 1398548 TGTCATCCCGGACAA CCCCGGC GAAA GCCGGGG GCAGATCCGGGACCG Caul_1320 1400516 - 1398729 - | signal peptide peptidase SppA, 67K type TERM 1016 1398903 - 1398927 + g 71 -9.9 -3.68222 | overlap 1398906 CTTCTCCAGGGCGTC GAACGGCGAGT TGG ACGCGCCGATC TTCTTGAGCTTCACC Caul_1321 1401072 - 1402838 + | hypothetical protein Caul_1322 1403329 - 1404987 + | hypothetical protein Caul_1323 1405052 - 1406281 + | hypothetical protein TERM 1017 1406378 - 1406325 - T 86 -16.8 -3.12351 | opp_overlap 1406334 1406369, overlap 1406362 TCCGTGCAGATGCAA CGCCAGCGGGGCCTTGATCGCG-TGG CCCT CCAACG-GATCGAGGCCTTGCTGGCG CAAGTCCTATGAGCT TERM 1018 1406713 - 1406744 + T 74 -5.8 -4.52857 | gap 1, opp_overlap 1406700 AGCCTGACCGGCGAA GGGCTGGACCGGG AGACTAA CCCCG-CCAGCTC TTTTCTATCGGCCAT TERM 1019 1407017 - 1406988 - T 74 -13.5 -2.85585 | overlap 1406985 1406981 GGCCAAAACAGATGA CCCCCGGAGGG CCGCAACT CCCGCCGGGGG CGCTGTGGGCGTCGA Caul_1324 1407392 - 1407135 - | helix-turn-helix domain-containing protein TERM 1020 1407672 - 1407693 + G 72 -4.4 -4.62069 | opp_overlap 1407670, overlap 1407673 AGACATCAGCGAAGG C-GGCGCTGC GAAG GC-GCGCCTG TTTTTCCCGTCGCCG Caul_1325 1407559 - 1408038 + | hypothetical protein Caul_1326 1408630 - 1408088 - | resolvase domain-containing protein TERM 1021 1408716 - 1408699 - R 76 -12.7 -3.41636 | AATCAACCTAATTAA GACGCCC GCCG GGGCGTC GGCGCGTATCGCGTT Caul_1327 1409940 - 1409326 - | TetR family transcriptional regulator Caul_1328 1410727 - 1409957 - | ABC transporter related Caul_1329 1411536 - 1410724 - | hypothetical protein TERM 1022 1411450 - 1411396 - G 70 -14.8 -2.77899 | overlap 1411393 1411437 CTGGCCCAGGAACCA CGGCGGGGTCAGGGCGGCGACGGTTC CGC GCACGGCGAACACCCCAACCCCGCCG ACCATGCGCACGGCG Caul_1330 1412044 - 1411538 - | hypothetical protein Caul_1331 1412732 - 1412079 - | toluene tolerance family protein Caul_1332 1413508 - 1412729 - | VacJ family lipoprotein TERM 1023 1413685 - 1413645 - R 85 -14.9 -3.58533 | gap 1, opp_overlap 1413652, overlap 1413647 1413652 CGACAAGCGGGGAAA GAGGAAAGGCGCACCGAT AGGGGA AT-GGTGCGCCTTTCCAC CGTGACACCCGGGTG TERM 1024 1413683 - 1413647 - R 88 -16.1 -3.36837 | gap 1, opp_overlap 1413652, overlap 1413645 1413652 ACAAGCGGGGAAAGA GGAAAGGCGCACCGAT AGGGGA AT-GGTGCGCCTTTCC ACCGTGACACCCGGG TERM 1025 1413678 - 1413652 - R 73 -8.8 -4.00532 | gap 1, opp_overlap 1413652, overlap 1413647 1413645 CGGGGAAAGAGGAAA GGCGCACCGAT AGGGGA AT-GGTGCGCC TTTCCACCGTGACAC TERM 1026 1413652 - 1413678 + r 70 -10.1 -3.55444 | opp_overlap 1413647 1413645 1413652 CGGGGAAAGAGGAAA GGCGCACCGAT AGGGG AATGGTGCGCC TTTCCACCGTGACAC Caul_1333 1414537 - 1413932 - | TetR family transcriptional regulator TERM 1027 1414505 - 1414536 + g 70 -3.6 -4.52047 | gap 1, overlap 1414507 CTCATTTCGCTCTTC TTG-CCGCGCGACAG CTT CTGGCGTGTGGACCA TTTTCTGCTCTCCTC Caul_1334 1415222 - 1414617 - | TetR family transcriptional regulator TERM 1028 1415317 - 1415302 - H 100 -6.2 -5.44119 | opp_overlap 1415302 TCTACGTCAAAAAAA GAATGA TCGT TCATTC TTTTGATGTCAATTG TERM 1029 1415302 - 1415317 + H 71 -6.2 -4.36931 | opp_overlap 1415302 TCTACGTCAAAAAAA GAATGA TCGT TCATTC TTTTGATGTCAATTG Caul_1335 1415350 - 1416507 + | RND family efflux transporter MFP subunit TERM 1030 1418833 - 1418823 - g 71 -2.4 -4.56597 | CGGCCGGGTCAAAAA GGTC TAT GTCC AGGCCGACGCACCGT Caul_1336 1416520 - 1419663 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 1031 1419766 - 1419739 - g 70 -15.6 -2.71144 | gap 1 CATGGCCCCGAAGTA CG-AGCGACCGGC CCT GCCGGTCGCCACG ACCTGGCCCACGGCT Caul_1337 1419665 - 1421080 + | RND efflux system outer membrane lipoprotein Caul_1338 1421828 - 1421439 - | hypothetical protein TERM 1032 1421827 - 1421816 - G 72 -3.6 -4.59109 | TAGAGCGGGTAAAAA CGCG GCGA CGCA TACTGGGATGCAGCG Caul_1339 1422319 - 1421879 - | hypothetical protein TERM 1033 1423708 - 1423743 + G 77 -3.8 -4.78848 | overlap 1423729 CGGAGTACGTGCGAT TCGCTACCGAGGGCGC TCAC GCGGCCTGGCTGCCGA TTTTCTATTTCGCGA Caul_1340 1422573 - 1424132 + | putative transcriptional regulator Caul_1341 1424901 - 1425329 + | MucR family transcriptional regulator TERM 1034 1425354 - 1425387 + T 100 -17.5 -4.61231 | opp_overlap 1425360, overlap 1425360 TCAAGGTCGAGAGAT GCAGAACCCCCGCTG GAAA CAGCGGGGGTTTTTC TTTTTGGCCGTCTCC TERM 1035 1425381 - 1425360 - T 93 -17.3 -3.41125 | opp_overlap 1425354 1425360 TCGAGAGATGCAGAA CCCCCGCTG GAAA CAGCGGGGG TTTTTCTTTTTGGCC TERM 1036 1425360 - 1425381 + T 100 -17.3 -5.61881 | opp_overlap 1425360, overlap 1425354 TCGAGAGATGCAGAA CCCCCGCTG GAAA CAGCGGGGG TTTTTCTTTTTGGCC Caul_1342 1426049 - 1425492 - | GCN5-related N-acetyltransferase Caul_1343 1428151 - 1426046 - | oligopeptidase B Caul_1344 1428349 - 1429203 + | hypothetical protein Caul_1345 1429276 - 1429458 + | CsbD family protein TERM 1037 1429513 - 1429480 - T 91 -21.1 -2.62263 | opp_overlap 1429480 1429485, overlap 1429485 ACGTCGTCTAGACGA GCAAACGGCCGCGGA GTGA TCCGCGGCCGTTTTC TTTTGAGCACGAAAA TERM 1038 1429480 - 1429513 + T 100 -21.1 -4.07568 | opp_overlap 1429480 1429485, overlap 1429485 ACGTCGTCTAGACGA GCAAACGGCCGCGGA GTGA TCCGCGGCCGTTTTC TTTTGAGCACGAAAA TERM 1039 1429508 - 1429485 - T 100 -19.6 -3.81951 | opp_overlap 1429480 1429485, overlap 1429480 GTCTAGACGAGCAAA CGGCCGCGGA GTGA TCCGCGGCCG TTTTCTTTTGAGCAC TERM 1040 1429485 - 1429508 + T 100 -19.6 -5.07652 | opp_overlap 1429485 1429480, overlap 1429480 GTCTAGACGAGCAAA CGGCCGCGGA GTGA TCCGCGGCCG TTTTCTTTTGAGCAC Caul_1346 1430072 - 1429626 - | dehydratase Caul_1347 1431937 - 1430399 - | acyl-CoA synthetase Caul_1348 1433604 - 1431937 - | glucose-methanol-choline oxidoreductase TERM 1041 1432974 - 1432996 + g 70 -8.3 -3.8211 | opp_overlap 1432969 1432985, overlap 1432982 GGTGCAGATAGGCCA CGGCCGACG AACAG CGCTGGCCG TTCTTCTGGGTGACC Caul_1349 1433768 - 1434652 + | enoyl-CoA hydratase TERM 1042 1434666 - 1434692 + F 86 -15.2 -3.63569 | opp_overlap 1434653, overlap 1434658 1434669 GAGCGACGGGGCCTA GACCCCTCTCTC CAA GAGAGAGGGCTC TTGTTCCGAACTTCC TERM 1043 1434669 - 1434689 + F 77 -15.5 -2.63252 | opp_overlap 1434653, overlap 1434658 1434666 CGACGGGGCCTAGAC CCCTCTCTC CAA GAGAGAGGG CTCTTGTTCCGAACT Caul_1350 1434762 - 1435256 + | GAF domain-containing protein Caul_1351 1435345 - 1436475 + | hypothetical protein Caul_1352 1436500 - 1437420 + | glycosyl transferase family protein TERM 1044 1437522 - 1437473 - g 82 -16.6 -3.28712 | opp_overlap 1437465 1437487 CTTCGGCCGGGAGAA CCTCGTCTTCCAACA-CGGCCTGC ACCA GC-GGCCGATGTTCGACGACGAGG GCCTGGCGCGGCTGC Caul_1353 1437417 - 1438334 + | hypothetical protein TERM 1045 1438415 - 1438378 - T 88 -16.3 -3.30124 | gap 1, opp_overlap 1438387 1438392 1438395 TGTCATCCCGGACAA GCGCGCAGCGCGCCGATC CGG GACCGACGC-CTGAGCGC CGCATTTCCGGCGGT Caul_1354 1439019 - 1438597 - | hypothetical protein Caul_1355 1439290 - 1440774 + | methyl-accepting chemotaxis sensory transducer Caul_1356 1440903 - 1442123 + | hypothetical protein Caul_1357 1442340 - 1442765 + | MucR family transcriptional regulator Caul_1358 1443801 - 1442779 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Caul_1359 1444260 - 1444757 + | hypothetical protein Caul_1360 1447334 - 1444902 - | TonB-dependent receptor Caul_1361 1448646 - 1447444 - | acyl-CoA dehydrogenase domain-containing protein Caul_1362 1448739 - 1449512 + | LuxR family transcriptional regulator Caul_1363 1450431 - 1449520 - | ribokinase-like domain-containing protein TERM 1046 1450256 - 1450313 + g 83 -20.6 -2.71712 | overlap 1450256 TCCTCCTTGCCGACC GCGCCCATCAGGCGGGTCG-GGGCGCCC ATGC GGGCGGCCGCGACG-GCCTGGTTGGCGC CTTTGCCGCCGGGGA TERM 1047 1450256 - 1450314 + g 82 -14.6 -3.53012 | gap 3, overlap 1450256 TCCTCCTTGCCGACC G-CGCCCATCAGGCGGGTCG-GGGCGCCC ATGC GGGCGGCCGCGACG-GCCTGGTTGGCGCC TTTGCCGCCGGGGAA Caul_1364 1451398 - 1450598 - | flagellar biosynthesis protein FliP Caul_1365 1451709 - 1451398 - | fliO protein TERM 1048 1451752 - 1451727 - H 70 -10.4 -3.57144 | gap 1, overlap 1451728 1451730 CGCCTGACGTGCAAA GGAGGCGCGGC GCACG GCCGCACC-CC AGGTGTGCCCCAAGG TERM 1049 1452162 - 1452201 + G 72 -8.5 -4.08216 | gap 1, opp_overlap 1452164 GGACCAGATGCTCAA GATGACCGACGCG-CGGA TGAAC TACGACGCGGCGGTCAGC TTTTACCAGAAATCC Caul_1366 1451839 - 1452258 + | flagellar basal body rod protein FlgB Caul_1367 1452271 - 1452693 + | flagellar basal body rod protein FlgC Caul_1368 1452705 - 1453013 + | flagellar hook-basal body protein FliE Caul_1369 1453118 - 1453420 + | ArsR family transcriptional regulator Caul_1370 1453454 - 1454269 + | short-chain dehydrogenase/reductase SDR Caul_1371 1454966 - 1454460 - | GCN5-related N-acetyltransferase Caul_1372 1455262 - 1454963 - | hypothetical protein TERM 1050 1455310 - 1455322 + H 70 -10.5 -3.60792 | opp_overlap 1455310 TGCCGTGCAATTCAA GGCGG TCG CCGCC TTTGGCGGTTCGAGA TERM 1051 1455343 - 1455354 + H 78 -3.6 -5.00616 | CGGTTCGAGAATGAG GGGC GCAC GCTC TTTTTTCGACGGGCA Caul_1373 1455454 - 1456521 + | ribosome small subunit-dependent GTPase A TERM 1052 1456654 - 1456626 - T 80 -5.2 -4.84359 | opp_overlap 1456584 1456626 1456638, overlap 1456584 1456627 GGAGTCGTAGAAAAA CCTCATCCTGAG CTTGT CGAAGGACGAGG TTTTCGCCCCATACG Caul_1374 1456920 - 1456687 - | hypothetical protein Caul_1375 1457083 - 1457847 + | ABC transporter related TERM 1053 1458857 - 1458799 - g 82 -14.5 -3.50853 | overlap 1458796 1458800 GGGCCGCAAGGACAA CCCCGGCCGCGCCGCC-GTGCTCGACG GCCTGCG CGCCGAGCTCAGGCGCCGCGAC-GGCG TGGTGCTGCTGGCGC TERM 1054 1458857 - 1458800 - g 70 -14.7 -2.70298 | gap 1, overlap 1458796 1458799 GGCCGCAAGGACAAC CCCGGCCGCGCCGCC-GTGCTCGACG GCCTGCG CGCCGAGCTCAGGCGCCGCGACGGCG TGGTGCTGCTGGCGC Caul_1376 1457840 - 1459387 + | substrate-binding region of ABC-type glycine betaine transport system Caul_1377 1459610 - 1461298 + | type I phosphodiesterase/nucleotide pyrophosphatase TERM 1055 1461374 - 1461412 + F 70 -12.2 -3.14602 | opp_overlap 1461370 1461375, overlap 1461372 GCTAGGATCAAGCCA AGCCGGGGCGCTTCCGCG TCA CGCCTGATCGCCCCGGCC TCTTGGTCCGGTAAC TERM 1056 1461411 - 1461375 - f 76 -13.5 -3.21695 | opp_overlap 1461374 1461372, overlap 1461370 CTAGGATCAAGCCAA GCCGGGGCGCTTCCGCG TCA CGCCTGATCGCCCCGGC CTCTTGGTCCGGTAA TERM 1057 1461568 - 1461551 - f 83 -6.9 -4.82901 | overlap 1461554 CGCGCTGCACAAAAA GCATGGC GGGC GCCGTGC AATGGGGCGCCGACA Caul_1378 1461778 - 1464396 + | TonB-dependent receptor TERM 1058 1464447 - 1464413 - f 70 -12.1 -3.17075 | gap 1, opp_overlap 1464418, overlap 1464417 TCGCCGCCAATCCAA GC-GAGGAGCCGGGCG GCGA CGCCCGGCTCTTTTGC TTTGGCGCACCAGCG TERM 1059 1464442 - 1464417 - f 80 -16.1 -2.57013 | opp_overlap 1464418, overlap 1464413 CGCCAATCCAAGCGA GGAGCCGGGCG GCGA CGCCCGGCTCT TTTGCTTTGGCGCAC TERM 1060 1464418 - 1464441 + F 100 -19.6 -4.54727 | opp_overlap 1464417 1464413 GCCAATCCAAGCGAG GAGCCGGGCG GCGA CGCCCGGCTC TTTTGCTTTGGCGCA TERM 1061 1464699 - 1464724 + G 90 -8.1 -5.0133 | overlap 1464675 1464698 CGTCCTCAATGGGGG CCGGCGGCGTG TTGA CGCGGCGGCGG TTTTTTGAGGGCCTG Caul_1379 1464692 - 1466278 + | L-amino-acid oxidase Caul_1380 1466320 - 1466721 + | cytochrome c class I TERM 1062 1466732 - 1466771 + F 95 -20.8 -3.21099 | opp_overlap 1466733 1466736, overlap 1466736 ACTGAGTTTAGAAAG ATAACCGCTCATCCCGGC GTTC GCCGGGATGAGCGGTCAG TTGGTAGTCAAAGCC TERM 1063 1466770 - 1466733 - f 100 -26.5 -3.53733 | opp_overlap 1466732 1466736, overlap 1466736 CTGAGTTTAGAAAGA TAACCGCTCATCCCGGC GTTC GCCGGGATGAGCGGTCA GTTGGTAGTCAAAGC TERM 1064 1466736 - 1466767 + F 100 -26 -2.57795 | opp_overlap 1466733 1466736, overlap 1466732 AGTTTAGAAAGATAA CCGCTCATCCCGGC GTTC GCCGGGATGAGCGG TCAGTTGGTAGTCAA TERM 1065 1466767 - 1466736 - f 100 -26 -3.90097 | opp_overlap 1466736 1466732, overlap 1466733 AGTTTAGAAAGATAA CCGCTCATCCCGGC GTTC GCCGGGATGAGCGG TCAGTTGGTAGTCAA Caul_1381 1466815 - 1467312 + | endoribonuclease L-PSP Caul_1382 1467589 - 1467852 + | flagellar biosynthesis protein FliQ Caul_1383 1467864 - 1468619 + | flagellar biosynthesis protein FliR TERM 1066 1468689 - 1468668 - g 72 -8.7 -4.00323 | TCAAAGACAGAAGAA CCAACAGCC AAGA AGCTGTCGG ACGCGCGCGCCAAGG Caul_1384 1468629 - 1469711 + | flagellar biosynthesis protein FlhB Caul_1385 1469920 - 1472007 + | integral membrane sensor hybrid histidine kinase Caul_1386 1473380 - 1472043 - | hypothetical protein TERM 1067 1473340 - 1473317 - G 74 -11.6 -3.72695 | ACGCGGCCGAGGAAA CGTCCGCCGC CTGC GCGACGGTCG AAAGTCCGCCGAACG TERM 1068 1473484 - 1473446 - R 72 -7.8 -4.19746 | overlap 1473447 1473449 GCTAGGTGAAAACAA TGAGGGGCGCGGCGGCCG ACG CGGCTATCGCGCCGCGCG CGGCGGATGGTCGGC TERM 1069 1473481 - 1473449 - R 71 -12.5 -3.10981 | overlap 1473447 1473446 AGGTGAAAACAATGA GGGGCGCGGCGGCCG ACG CGGCTATCGCGCCGC GCGCGGCGGATGGTC Caul_1387 1475346 - 1473499 - | methyl-accepting chemotaxis sensory transducer Caul_1388 1476344 - 1475814 - | GCN5-related N-acetyltransferase TERM 1070 1476103 - 1476082 - G 74 -12.3 -3.64822 | ATCCCGCGATGGAAA TCGGCGAAG CCGA CCTCGCCGA CATAGCGGCCCGTCG Caul_1389 1476437 - 1476814 + | hypothetical protein TERM 1071 1477672 - 1477647 - g 72 -6 -4.34008 | overlap 1477649 1477650 GACCAAGGAAAAGAA CATCCCCGGC GACTGG GCCGGCGAGG CGAGCAAGATCTACG Caul_1390 1476940 - 1478769 + | hypothetical protein TERM 1072 1478835 - 1478877 + T 84 -17.2 -2.71791 | gap 1, opp_overlap 1478835 1478841, overlap 1478841 TGAGGGGTTGAAGAA CAGAAACGCCGCGA-CAGC CTCAAA GCTGGTCGCGGCGTTTGTG GTTTGAGAGACCCCT TERM 1073 1478877 - 1478835 - T 100 -17.9 -3.62046 | gap 1, opp_overlap 1478835 1478841, overlap 1478841 TGAGGGGTTGAAGAA CAGAAACGCCGCGA-CAGCC TCAA AGCTGGTCGCGGCGTTTGTG GTTTGAGAGACCCCT TERM 1074 1478841 - 1478871 + T 100 -14.8 -4.13654 | gap 1, opp_overlap 1478835 1478841, overlap 1478835 GTTGAAGAACAGAAA CGCCGCGA-CAGC CTCAAA GCTGGTCGCGGCG TTTGTGGTTTGAGAG TERM 1075 1478871 - 1478841 - T 100 -15.5 -4.34263 | gap 1, opp_overlap 1478841 1478835, overlap 1478835 GTTGAAGAACAGAAA CGCCGCGA-CAGCC TCAA AGCTGGTCGCGGCG TTTGTGGTTTGAGAG Caul_1391 1480553 - 1478949 - | diguanylate phosphodiesterase TERM 1076 1480415 - 1480397 - G 78 -16 -3.01712 | CGGCGGCGGTGAACA GGTCGCGC CAG GCGCGACC CATCAGGGTGCGCTC Caul_1392 1480838 - 1481908 + | recombinase A TERM 1077 1482030 - 1482061 + F 86 -13 -3.97042 | overlap 1482031 GGCCGGCCGCGATCC CCGGACGCCTGG ACCCCATG CCAGGCGTCCGA TTTCGTTGGTGCTCC TERM 1078 1482031 - 1482060 + F 84 -16.5 -2.97743 | overlap 1482030 GCCGGCCGCGATCCC CGGACGCCTGG ACCCCATG CCAGGCGTCCG ATTTCGTTGGTGCTC Caul_1393 1482358 - 1483146 + | hypothetical protein TERM 1079 1485206 - 1485189 - g 72 -9.1 -3.98282 | CGCAGACCAAGGAAA TGGCCCC GCAG GAGGCCA TCGAGGCTGGCGCCG Caul_1394 1483301 - 1485952 + | alanyl-tRNA synthetase Caul_1395 1486963 - 1486058 - | AraC family transcriptional regulator TERM 1080 1486881 - 1486847 - G 74 -12.1 -3.66288 | gap 1, overlap 1486844 GACGGCGCAATAGAA GGGCCGCCCGTCG-TC GTCC GAGCGGCGGACAGCCC AGGGACCCGATCCCA Caul_1396 1487054 - 1487797 + | short-chain dehydrogenase/reductase SDR Caul_1397 1487973 - 1488083 + | alanyl-tRNA synthetase TERM 1081 1489469 - 1489479 + G 75 -4.6 -4.66833 | CGGAACAGGGCACGG CGGC GGA GCTG TTTTTGCCGTTGAAG Caul_1398 1488607 - 1489497 + | AraC family transcriptional regulator TERM 1082 1489820 - 1489808 - g 71 -10.5 -3.77196 | opp_overlap 1489814 1489816, overlap 1489809 TCATGAGCCAGGAAA CCGCC GGC GGCGG CGTCAGCTACGAGAC Caul_1399 1489795 - 1491288 + | amino acid permease-associated region TERM 1083 1491321 - 1491293 - T 100 -21.7 -3.19091 | overlap 1491281 1491269 1491294 AGACGCACTGACGAA GGTCGGCGCGCCG GGG CGGCGCGCCGACA CCTACCCCCCGAAGG TERM 1084 1491320 - 1491294 - T 100 -25.2 -2.51133 | overlap 1491281 1491269 1491293 GACGCACTGACGAAG GTCGGCGCGCCG GGG CGGCGCGCCGAC ACCTACCCCCCGAAG Caul_1400 1491964 - 1491323 - | hypothetical protein Caul_1401 1492386 - 1491973 - | hypothetical protein TERM 1085 1492435 - 1492403 - R 70 -7.7 -4.08767 | gap 1 TTTAGTCCCCCAAAA GCCCTAGGC-CCGG AATTCG CCGACGCCCAAGGC CACGCCGATCATGAT Caul_1402 1493059 - 1492406 - | hypothetical protein Caul_1403 1493236 - 1493673 + | hypothetical protein TERM 1086 1494351 - 1494317 - g 79 -11.5 -3.96624 | GACCTCGACGAGAAA CTGCGCCTGGCC-GGCA TCC TGCCCGGCCAGTC-CAG CGCCGACGACGTCCT Caul_1404 1493705 - 1494430 + | phage shock protein A, PspA TERM 1087 1494603 - 1494569 - f 71 -8.5 -3.85698 | GCCGGCGCGCAGAAA CGTCCTCGTCCTTCG ACAGG CTCAGGATGAGGACG AATTCAACGACGGTT Caul_1405 1494850 - 1496007 + | glutathionylspermidine synthase Caul_1406 1496123 - 1496827 + | hypothetical protein Caul_1407 1496885 - 1497475 + | CDP-alcohol phosphatidyltransferase TERM 1088 1497608 - 1497631 + F 70 -10.2 -3.56092 | gap 1, opp_overlap 1497600 GAAAGCACGGGGAGG GCGTCGGCCGG CGA CCGGACG-CGC TTTCGGGGGTGGTCG Caul_1408 1498173 - 1498694 + | flavin reductase domain-containing protein Caul_1409 1498790 - 1500286 + | methylmalonate-semialdehyde dehydrogenase Caul_1410 1500328 - 1501311 + | peptidase M15D vanX D-ala-D-ala dipeptidase Caul_1411 1502023 - 1501286 - | hypothetical protein Caul_1412 1502802 - 1502074 - | HhH-GPD family protein Caul_1413 1503480 - 1502908 - | NUDIX hydrolase Caul_1414 1504466 - 1503477 - | phosphate transporter TERM 1089 1503538 - 1503507 - G 72 -8.6 -3.96534 | gap 1 CCCAAAATAATAGAA CGCCGCC-GCGACCA GGC CGGCCGCGGGCAGGG TGACGATCCAGGCGG Caul_1415 1505122 - 1504478 - | hypothetical protein TERM 1090 1505275 - 1505252 - H 74 -13.2 -3.29511 | gap 1, opp_overlap 1505250 1505248 GTGACGGTTTTATAA CGGT-CTCGCC TCT GGCGAGGACCG TCTGGCTTTGGCACT Caul_1416 1505321 - 1505785 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein Caul_1417 1505788 - 1507971 + | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 1091 1507972 - 1508000 + F 71 -6 -4.29738 | gap 1, overlap 1507965 GACCAACTGGCCTGA GGCGTGGCTTTGA TCGC TCAAC-CCGCGCC TTTTCCTCCGTCTAC TERM 1092 1509139 - 1509169 + G 75 -9.7 -4.05446 | opp_overlap 1509107, overlap 1509122 1509141 CGGCCATGGCGCCGA TGGGCGAGGCCAG CTGCC TTGGCCTCGACTA TTTCTGCTTCGAGGG Caul_1418 1508190 - 1509542 + | FAD dependent oxidoreductase Caul_1419 1509706 - 1509539 - | hypothetical protein Caul_1420 1509880 - 1511283 + | major facilitator transporter TERM 1093 1511342 - 1511302 - f 91 -16.9 -3.34013 | opp_overlap 1511311, overlap 1511304 1511311 GAGGCTTCCAAGCAA GATGGAAGAGCCCGGGCGT TTC ACGCCCGGGCTTTTTCATG CCTGCCGGTCCTGCC TERM 1094 1511340 - 1511304 - f 95 -19.5 -3.23853 | opp_overlap 1511311, overlap 1511302 1511311 GGCTTCCAAGCAAGA TGGAAGAGCCCGGGCGT TTC ACGCCCGGGCTTTTTCA TGCCTGCCGGTCCTG TERM 1095 1511311 - 1511333 + F 100 -20.6 -4.7497 | opp_overlap 1511304 1511302 1511311 AAGCAAGATGGAAGA GCCCGGGCGT TTC ACGCCCGGGC TTTTTCATGCCTGCC TERM 1096 1511333 - 1511311 - f 95 -20.6 -3.16618 | opp_overlap 1511311, overlap 1511304 1511302 AAGCAAGATGGAAGA GCCCGGGCGT TTC ACGCCCGGGC TTTTTCATGCCTGCC Caul_1421 1511511 - 1512047 + | hemerythrin HHE cation binding region protein TERM 1097 1512053 - 1512079 + F 81 -13.1 -3.72576 | gap 1, opp_overlap 1512061, overlap 1512057 GCCGAACTGACCTTG GGAGGGAAGGCC TCCG GGCCTTCC-TCC TTTCCTGGAGGACCC TERM 1098 1512057 - 1512076 + F 74 -13.6 -2.96695 | opp_overlap 1512061, overlap 1512053 AACTGACCTTGGGAG GGAAGGCC TCCG GGCCTTCC TCCTTTCCTGGAGGA Caul_1422 1512095 - 1512610 + | CinA domain-containing protein TERM 1099 1512650 - 1512625 - T 100 -19.7 -4.72272 | opp_overlap 1512625 GCGGCCCACGAAAAA GCGCCCCCGGC TGAA GCCGGAGGCGC TGTTCCGATCCAATG TERM 1100 1512625 - 1512650 + T 88 -17.5 -3.06162 | opp_overlap 1512625 GCGGCCCACGAAAAA GCGCCCCCGGC TGAA GCCGGAGGCGC TGTTCCGATCCAATG Caul_1423 1512935 - 1512678 - | transglycosylase-associated protein TERM 1101 1512824 - 1512807 - G 72 -8.3 -3.97307 | CTGATTGAACAAGAA GCCGCCG ACCA CGGCGCC GACGATCCCCAGCAC Caul_1424 1513204 - 1513085 - | hypothetical protein Caul_1425 1514715 - 1513375 - | NHL repeat-containing protein Caul_1426 1515844 - 1515083 - | GntR domain-containing protein Caul_1427 1515994 - 1517205 + | mandelate racemase/muconate lactonizing protein Caul_1428 1517795 - 1517283 - | hypothetical protein Caul_1429 1518619 - 1517903 - | flagellar basal body L-ring protein Caul_1430 1519377 - 1518634 - | flagellar basal body P-ring formation protein FlgA Caul_1431 1520170 - 1519382 - | flagellar basal body rod protein FlgG Caul_1432 1520921 - 1520184 - | flagellar basal body rod protein TERM 1102 1521216 - 1521166 - g 78 -14.1 -3.66497 | gap 2, overlap 1521158 1521167 1521170 CAAGAAACCCCCAAA GGAAGCTCCCGCCCCCGAAGGCG AAGAGGG CGCCGTCGAGGGC-GAAGCT-CC AGCCAAGAAGAAGCC TERM 1103 1521216 - 1521167 - g 74 -16.5 -2.79175 | gap 1, overlap 1521158 1521166 1521170 AAGAAACCCCCAAAG GAAGCTCCCGCCCCCGAAGGCG AAGAGGG CGCCGTCGAGGGC-GAAGCTCC AGCCAAGAAGAAGCC TERM 1104 1521213 - 1521170 - g 82 -14.6 -3.5332 | gap 1, overlap 1521166 1521167 AAACCCCCAAAGGAA GCTCCCGCCCCCGAAGGCG AAGAGGG CGCCGTCGAGGGC-GAAGC TCCAGCCAAGAAGAA TERM 1105 1521255 - 1521229 - g 79 -11.7 -3.97307 | gap 1, opp_overlap 1521254 TCCAGCCAAGAAGAA GCCGCCGATGAT GATC ATCATC-GCGGC CGCGGCGGCCGTCGT Caul_1433 1521146 - 1521757 + | flagellar basal body-associated protein FliL TERM 1106 1521867 - 1521841 - g 79 -11.5 -4.07687 | gap 1 ATGGGCCTCGGAAAA CCCGC-CCGCCG AAGG CGGCGGCGTGGG CGACAACCAGTTCGG TERM 1107 1522614 - 1522602 - g 73 -7.7 -4.1196 | opp_overlap 1522604 AACCCATCCGGAAAA TGCTG CTG CAGCA GTTCATGGGCGAGAA Caul_1434 1521788 - 1522921 + | flagellar motor switch protein FliM Caul_1435 1522918 - 1523511 + | hypothetical protein TERM 1108 1524251 - 1524203 - g 79 -15.1 -3.28712 | GGCCGCCGCCGACAA GCCGGCCGCCGACGCGAACGC CCAAGCC GCGGCCGCGCCATTGGCCGGC GCGACTCCGGCCGGC Caul_1436 1523508 - 1524284 + | hypothetical protein TERM 1109 1525183 - 1525146 - g 82 -14.9 -3.40403 | gap 1, opp_overlap 1525169, overlap 1525124 GGCCCGCGACGACAA CGCCAGCC-CCGCGAC CCTGACC GCCACGGTGGCTGGCG CGACCAAGGTGATCT TERM 1110 1526829 - 1526802 - g 70 -12 -3.39327 | gap 1, overlap 1526803 GGTCGAGAGCGACAA GGGGCGGGACGTC GAG GACGT-CCGCGCC GACATCGCCTGGAAG Caul_1437 1524307 - 1527186 + | tetratricopeptide TPR_4 TERM 1111 1527347 - 1527389 + F 100 -23.4 -3.20723 | opp_overlap 1527375 TTAGACGCCGCGCGC GCGGTCCCGTCGGGGTCTCG CCA CGAGACGCCGGAGGGGCCGC TTGCATTGCTCCGAC Caul_1438 1527442 - 1528905 + | glucose-6-phosphate 1-dehydrogenase Caul_1439 1528917 - 1529624 + | 6-phosphogluconolactonase Caul_1440 1529629 - 1531455 + | phosphogluconate dehydratase Caul_1441 1531469 - 1532458 + | glucokinase Caul_1442 1532719 - 1533744 + | LacI family transcription regulator Caul_1443 1533967 - 1535397 + | pyruvate kinase TERM 1112 1535425 - 1535473 + T 78 -12.3 -3.737 | opp_overlap 1535423 1535424 1535471, overlap 1535426 CTTAGATTCAAAACT GGTTGTCATCCCGGACGAGCGCG CAG CGCGAAGATCCGGGATGACAGCG TTTCCTGGCGGCTTA TERM 1113 1535426 - 1535472 + T 79 -15.8 -2.83899 | opp_overlap 1535423 1535424 1535471, overlap 1535425 TTAGATTCAAAACTG GTTGTCATCCCGGACGAGCGCG CAG CGCGAAGATCCGGGATGACAGC GTTTCCTGGCGGCTT Caul_1444 1536247 - 1535552 - | Crp/FNR family transcriptional regulator Caul_1445 1537829 - 1536696 - | acyl-CoA dehydrogenase domain-containing protein TERM 1114 1537447 - 1537486 + g 74 -15 -3.01712 | gap 1 GCATGGTGCGAGCCC TCGTCGACCGCCAAGGTCG CCA CGACCTCGCCGG-CGGCGA TCTTCGGCAGCCACG Caul_1446 1538442 - 1537831 - | DSBA oxidoreductase Caul_1447 1539666 - 1538461 - | acyl-CoA dehydrogenase domain-containing protein Caul_1448 1539870 - 1541543 + | hypothetical protein Caul_1449 1541715 - 1541503 - | hypothetical protein TERM 1115 1542670 - 1542695 + G 71 -11.9 -3.53811 | gap 1 GAATCCCGCACCGCC GAGGCGCTGCAG GCC CTG-GGCGCCTC TTTCACCGCCCTGGA Caul_1450 1541929 - 1544922 + | peptidoglycan binding domain-containing protein Caul_1451 1545086 - 1545565 + | hypothetical protein TERM 1116 1545580 - 1545635 + T 82 -11 -4.07568 | gap 1 GGCCGACGCTTCGAC CTATCGC-GTGATGGCGACTGTGGCGG TCG CCGCCGCGTCCACCGCCACGGCGGTAG TTTTGGCCGGCGCGG Caul_1452 1546065 - 1545580 - | hypothetical protein Caul_1453 1546861 - 1546148 - | hypothetical protein Caul_1454 1549349 - 1546875 - | DEAD/DEAH box helicase domain-containing protein TERM 1117 1549006 - 1549030 + g 71 -11.3 -3.5627 | overlap 1549009 TGGCGAGCCTTGCGG GCCTCGCCGGT GTC GCCGGTGCGGC TTTCGGCGATGATCT TERM 1118 1549394 - 1549409 + r 72 -3.9 -4.56775 | overlap 1549387 GTTTCCATGCGGCTA CCCGG CGCCTT TCGGG TTTTTGACAAAAGGT Caul_1455 1550232 - 1549465 - | hypothetical protein TERM 1119 1553073 - 1553129 + G 95 -10 -4.82901 | overlap 1553074 1553075 TTCTCCAGCTTGCCG GACGGCGTGAC-CATCGAGCGCCTCGGC CTT GTCGAGGCGATCGAGGCGAC-CGCCGCA TTTTTGTCGAAAGCC TERM 1120 1553074 - 1553128 + G 76 -13.5 -3.49419 | overlap 1553073 1553075 TCTCCAGCTTGCCGG ACGGCGTGAC-CATCGAGCGCCTCGGC CTT GTCGAGGCGATCGAGGCGAC-CGCCGC ATTTTTGTCGAAAGC TERM 1121 1553075 - 1553127 + G 78 -17 -2.6933 | overlap 1553074 1553073 CTCCAGCTTGCCGGA CGGCGTGAC-CATCGAGCGCCTCGGC CTT GTCGAGGCGATCGAGGCGAC-CGCCG CATTTTTGTCGAAAG Caul_1456 1550259 - 1553147 + | helicase c2 Caul_1457 1553384 - 1553650 + | hypothetical protein Caul_1458 1553696 - 1554280 + | hexapaptide repeat-containing transferase Caul_1459 1554882 - 1554337 - | MOSC domain-containing protein Caul_1460 1557301 - 1554887 - | UvrD/REP helicase Caul_1461 1557425 - 1557625 + | hypothetical protein Caul_1462 1557628 - 1557864 + | hypothetical protein Caul_1463 1558143 - 1557868 - | hypothetical protein TERM 1122 1558194 - 1558182 - H 78 -3.4 -5.08601 | opp_overlap 1558182, overlap 1558170 CCACTTGAATAAAAA TGAC GCAAT GTCA TCTTTATCAGGTTCA Caul_1464 1558225 - 1559007 + | putative uncharacterized protein involved in ubiquinone biosynthesis TERM 1123 1559808 - 1559798 - g 70 -8.2 -3.83026 | overlap 1559799 GCGCCGGAGACGAAA GGCG TTC CGCC CGGCATGAGCCAGGC Caul_1465 1559135 - 1560061 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1124 1560087 - 1560059 - T 72 -3.8 -4.59773 | opp_overlap 1560081, overlap 1560061 GCGGATCCGGAAAAA TAGCCGCTCG-CGA TCG CCGGCG-GCGGCTT CACCGCTTTTCCCAC TERM 1125 1560385 - 1560363 - T 82 -6.1 -4.9218 | CAGGGATGACAAAAA GGGGCGTCC ATTGA GGCCGGCCC CTACGCCTCCCGATA Caul_1466 1561303 - 1560386 - | LysR family transcriptional regulator TERM 1126 1560867 - 1560828 - G 71 -9.9 -3.80461 | gap 1 GAAGGGATCAGGAAA TGCGCCTCCAGCCCCGGC CAGTC GCCGGATCCGGCG-CGCA GGGCCAGGTCGAAGG TERM 1127 1561370 - 1561358 - H 71 -9.1 -3.72695 | ATCTCGGGCATGAAA GCCGA ATT TCGGC TCACGAAAAGCCATG Caul_1467 1561390 - 1561569 + | hypothetical protein TERM 1128 1561623 - 1561591 - T 70 -9.8 -3.53811 | gap 1 TTGAGCGTTCCTAAA CGCCGTCATGCCGGA CAAG TGCGGCGTG-CGGCG CGACCTAGACCGCGG Caul_1468 1561891 - 1561715 - | hypothetical protein Caul_1469 1562872 - 1561895 - | hypothetical protein Caul_1470 1563078 - 1563314 + | hypothetical protein Caul_1471 1563381 - 1564022 + | glutathione S-transferase domain-containing protein Caul_1472 1565664 - 1564159 - | PepSY-associated TM helix domain-containing protein TERM 1129 1564447 - 1564489 + g 72 -8.3 -4.07568 | gap 1, opp_overlap 1564400 1564435 1564476 AAGGACCGCCGACAG GGCCAGGGTCGCGGTCGAGC CCCA GAT-GATCGCCGCCCAGGCC TTTTCCAGACGCGGG Caul_1473 1566277 - 1565675 - | hypothetical protein Caul_1474 1568428 - 1566281 - | TonB-dependent siderophore receptor Caul_1475 1569115 - 1568537 - | SCP-like extracellular Caul_1476 1570281 - 1569208 - | signal transduction histidine kinase Caul_1477 1570563 - 1570393 - | hypothetical protein Caul_1478 1570955 - 1570695 - | hypothetical protein TERM 1130 1571136 - 1571175 + r 76 -5.6 -4.56597 | gap 1, opp_overlap 1571167, overlap 1571137 TGTCGCAGACGTGCG ACGCGGACCGTT-AGCGCG GTT CGCGCTGAAAGGGTTGCGA TTTTTGCGACCCAGG Caul_1479 1572485 - 1571283 - | aspartate aminotransferase TERM 1131 1572662 - 1572689 + r 76 -15.6 -2.52464 | AAAGCTTCCACATTC CGTTTTCCCGGC CTTC GCCGGGGAGACG TAGATTGGAGAGACG Caul_1480 1573250 - 1572711 - | NADPH-dependent FMN reductase Caul_1481 1573982 - 1573311 - | cobyrinic acid ac-diamide synthase Caul_1482 1574829 - 1574164 - | ParA family protein Caul_1483 1575094 - 1575834 + | SNARE associated Golgi protein Caul_1484 1577655 - 1575841 - | hypothetical protein Caul_1485 1578108 - 1579682 + | 2-isopropylmalate synthase TERM 1132 1579693 - 1579741 + T 81 -7.4 -4.42788 | gap 2, opp_overlap 1579692 1579693 TCTAGGCTCAACAAC GGCTGTCATCCCGGA-C-GAGCGC CCA GCGCGAAGATCCGCGATGACAACC TTTTGTGGGCTTAGC Caul_1486 1580229 - 1579756 - | hypothetical protein Caul_1487 1580357 - 1580932 + | O-methyltransferase family protein TERM 1133 1581072 - 1581126 + G 89 -18.4 -3.39327 | overlap 1581075 GTTCGCCACCCTGTT CGCCGGTGTCGCCTGGGCGGTGACGC CCG GCGCCAGCGCCCACGCGACGTCGTGG TTCTGGCTGTCCAGC TERM 1134 1581075 - 1581123 + G 89 -23.1 -2.85712 | overlap 1581072 CGCCACCCTGTTCGC CGGTGTCGCCTGGGCGGTGACGC CCG GCGCCAGCGCCCACGCGACGTCG TGGTTCTGGCTGTCC Caul_1488 1580929 - 1581807 + | hypothetical protein Caul_1489 1582160 - 1583203 + | cell shape determining protein MreB TERM 1135 1583199 - 1583254 + F 80 -14.9 -3.20078 | gap 3, opp_overlap 1583193, overlap 1583198 TTGAATCGACTCTCG CCTAGAGCGCGATC---CGCCGAAGTGG ACG CCGGTTCGGCGATAGATCGCGCTCCAGG TATTAGTCTGAAGTC TERM 1136 1584463 - 1584429 - g 74 -14.9 -3.01924 | CAGCCGCGCCCAAGA CGCCGTCGCCGACGC CCGCC GCCCCGGCGACGGCC GGGGCTCAGCCTGGC Caul_1490 1583345 - 1584490 + | rod shape-determining protein MreC Caul_1491 1584493 - 1585002 + | hypothetical protein Caul_1492 1585007 - 1587019 + | penicillin-binding protein 2 Caul_1493 1587016 - 1588173 + | rod shape-determining protein RodA Caul_1494 1589575 - 1588319 - | DNA polymerase IV TERM 1137 1589105 - 1589140 + g 74 -15.4 -3.05384 | gap 1 CTCGCGCTGGACCTT TGCCAGCATGGCG-GCC GGC GGCGCGCCGTGCAGGCG TTCGGTGCCCGACAG TERM 1138 1589377 - 1589419 + g 70 -8.5 -3.85698 | gap 2, overlap 1589375 CGCCGCGCTTGCCGC CGCCGACGATCACCGGCTTGT CGC GCAAGGAGG-GATCGTC-GCG TTTCTCGACCGAGGC Caul_1495 1590219 - 1589572 - | hypothetical protein Caul_1496 1590327 - 1590710 + | response regulator receiver protein Caul_1497 1590715 - 1592079 + | response regulator PleD TERM 1139 1592074 - 1592095 + T 74 -12.3 -3.51924 | GTGGTGGGGAGGGCG GCTTAGGGC TTTC GCCCTGAGC TTATCTCAATCCCCC Caul_1498 1593024 - 1592254 - | glutamine cyclotransferase TERM 1140 1593073 - 1593098 + r 76 -12.5 -3.46602 | opp_overlap 1593075, overlap 1593075 AATGGCCCAAAGAAA AACGCCCGGCT TCGC GGCCGGGCGTC TTGTCATGTCGAAAA TERM 1141 1593075 - 1593096 + r 84 -15.1 -3.30651 | opp_overlap 1593075, overlap 1593073 TGGCCCAAAGAAAAA CGCCCGGCT TCGC GGCCGGGCG TCTTGTCATGTCGAA TERM 1142 1593096 - 1593075 - R 100 -14.4 -5.27335 | opp_overlap 1593075 1593073 TGGCCCAAAGAAAAA CGCCCGGC TTCGCG GCCGGGCG TCTTGTCATGTCGAA Caul_1499 1593293 - 1593126 - | 50S ribosomal protein L33 Caul_1500 1594151 - 1593423 - | NUDIX hydrolase TERM 1143 1593789 - 1593744 - G 85 -17.4 -3.14132 | opp_overlap 1593754 1593783 GCCCTGGGCCAGGAA GGGCCGCCAGGCCCCCGCGC CGGGCC GCGCGGGGGCTTGCTGGGCC AGCAGCAGGCCAGTC TERM 1144 1593754 - 1593779 + g 86 -19 -3.14132 | opp_overlap 1593744 AGGAAGGGCCGCCAG GCCCCCGCGC CGGGCC GCGCGGGGGC TTGCTGGGCCAGCAG Caul_1501 1594435 - 1595730 + | amidohydrolase TERM 1145 1595751 - 1595731 - T 100 -16.9 -3.92542 | TTGAGCCGCAAATAA CCCTCTCCC ATG GGGAGAGGG AGGGGCCCAAGCGAA TERM 1146 1595851 - 1595828 - T 79 -8.1 -4.36914 | overlap 1595829 GCGTTCGTGAGAAAA CGGTGAGGG CGTAAT CCCTCACCC TCCCACGACTTCGTC TERM 1147 1595850 - 1595829 - T 70 -11.6 -3.21934 | overlap 1595828 CGTTCGTGAGAAAAC GGTGAGGG CGTAAT CCCTCACC CTCCCACGACTTCGT Caul_1502 1598244 - 1595911 - | ribonuclease R TERM 1148 1597646 - 1597670 + g 86 -14.3 -3.93369 | TCCTTGAGGTCCTTG GCCTCCTGCTC GTT GAGCAGCAGGC TTTCCTTGGACTTGC Caul_1503 1599427 - 1598306 - | hypothetical protein TERM 1149 1599617 - 1599593 - R 85 -15.7 -3.53091 | opp_overlap 1599581 ACGCTTCCGGCGAAA GCCCGCATCCG CCC CGGATGCGGCC GCGCCCTAAAGTCTT TERM 1150 1599714 - 1599754 + r 89 -13.1 -4.18506 | opp_overlap 1599713, overlap 1599715 ACCCCTAGTACAGAT CCTCGATCCGCTGCGGCGG GGT CTGCGGCGGCGGTTCGGGC TTCTTTTCGGGCTCG TERM 1151 1599715 - 1599753 + r 84 -16.6 -3.10622 | opp_overlap 1599713, overlap 1599714 CCCCTAGTACAGATC CTCGATCCGCTGCGGCGG GGT CTGCGGCGGCGGTTCGGG CTTCTTTTCGGGCTC Caul_1504 1600065 - 1599703 - | hypothetical protein Caul_1505 1602788 - 1600098 - | DNA topoisomerase I TERM 1152 1600124 - 1600144 + g 78 -6.8 -4.63218 | overlap 1600123 1600122 CTTTGGCCTTCTTCG CGGCGG GCTTCTTCG CCGCCG TTTTCTTGGCGCCAG TERM 1153 1601427 - 1601459 + g 72 -13.3 -3.19463 | overlap 1601455 GGTGAAGTGCTGGTC GGCGCGGGCGTCGAG CAC CTTGGCGGCGGCGCC TTCCTCGATCATCGG Caul_1506 1603263 - 1602943 - | XRE family transcriptional regulator Caul_1507 1603555 - 1603274 - | hypothetical protein Caul_1508 1604708 - 1603608 - | DNA protecting protein DprA TERM 1154 1604718 - 1604741 + r 75 -11.6 -3.63515 | opp_overlap 1604712, overlap 1604721 CGTCATCAACCGGCG GGAGGCGGCG CTTG CGCCGCCGTC TTCTTGCCGATGCGG TERM 1155 1604721 - 1604738 + r 71 -14.1 -2.63549 | opp_overlap 1604712, overlap 1604718 CATCAACCGGCGGGA GGCGGCG CTTG CGCCGCC GTCTTCTTGCCGATG Caul_1509 1605355 - 1604708 - | hypothetical protein TERM 1156 1605420 - 1605431 + r 76 -7.2 -4.37092 | opp_overlap 1605420 1605419, overlap 1605410 1605413 GGCAAGGGCGAAAAC GCCG GTTT CGGC TTTTATAGCGGCGCT Caul_1510 1605778 - 1605497 - | plasmid stabilization system protein Caul_1511 1606013 - 1605768 - | CopG/Arc/MetJ family addiction module antidote protein Caul_1512 1606836 - 1606168 - | hypothetical protein TERM 1157 1606542 - 1606532 - G 79 -4.6 -4.67123 | overlap 1606533 GGAAAAGAAGCAAAA CGGC CCT GCCA AAGATAGCCGGTCCA Caul_1513 1607362 - 1606970 - | hypothetical protein Caul_1514 1607934 - 1607449 - | hypothetical protein Caul_1515 1608614 - 1607931 - | HlyD family secretion protein Caul_1516 1609973 - 1608669 - | dihydroorotase, multifunctional complex type Caul_1517 1611135 - 1610128 - | aspartate carbamoyltransferase catalytic subunit TERM 1158 1611087 - 1611067 - G 70 -3.9 -4.4078 | overlap 1611070 CCGGGGGAAGGAAAA GATGCGCTC GAG GATCGGATC GATCGCTCTCGCGGG Caul_1518 1611737 - 1611243 - | Holliday junction resolvase YqgF Caul_1519 1611819 - 1612106 + | glutamyl-tRNA(Gln) amidotransferase, C subunit Caul_1520 1612106 - 1613578 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 1159 1613629 - 1613606 - T 100 -17.4 -4.60041 | opp_overlap 1613606 AGCGATCCGGAAAAA GGGCGGCCCC GCGA GGAGCCGCCC TTTCTTTTTACGCTA TERM 1160 1613606 - 1613629 + T 100 -15.2 -4.87389 | opp_overlap 1613606 AGCGATCCGGAAAAA GGGCGGCCCC GCGA GGAGCCGCCC TTTCTTTTTACGCTA Caul_1521 1614269 - 1613676 - | hypothetical protein Caul_1522 1614475 - 1614903 + | hypothetical protein Caul_1523 1614900 - 1616399 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1161 1616561 - 1616525 - T 86 -18.2 -2.68223 | gap 1, opp_overlap 1616532 1616533, overlap 1616527 1616532 CAGGGAGACCACAAC GACAAAAGGCCCGCCGC TCGC GCGACGGGCCTTTT-TC ACGTCCGGAGCGTCG TERM 1162 1616560 - 1616527 - T 87 -17.5 -2.88069 | opp_overlap 1616532 1616533, overlap 1616525 1616532 GGGAGACCACAACGA CAAAAGGCCCGCCGC TCGC GCGACGGGCCTTTTT CACGTCCGGAGCGTC TERM 1163 1616532 - 1616555 + T 100 -15.2 -4.62069 | opp_overlap 1616527 1616525 1616532, overlap 1616533 ACCACAACGACAAAA GGCCCGCCGC TCGC GCGACGGGCC TTTTTCACGTCCGGA TERM 1164 1616555 - 1616532 - T 100 -17.4 -4.59069 | opp_overlap 1616532 1616533, overlap 1616527 1616525 ACCACAACGACAAAA GGCCCGCCGC TCGC GCGACGGGCC TTTTTCACGTCCGGA Caul_1524 1616936 - 1616580 - | proteophosphoglycan 5 Caul_1525 1617631 - 1617116 - | hypothetical protein Caul_1526 1617837 - 1618562 + | glutathione S-transferase domain-containing protein Caul_1527 1618742 - 1619017 + | hypothetical protein TERM 1165 1619082 - 1619061 - T 70 -10.2 -3.54424 | opp_overlap 1619056 1619060 CCTGATCGCGTGAAA GGCTTCAG TTTCCG CTGAAGCC GTTGATCGCGTAGCT Caul_1528 1619805 - 1619065 - | polysaccharide export protein TERM 1166 1619646 - 1619635 - G 76 -7.2 -4.36914 | GTCGCCCGGATAAAA CCGG TAGT CCGG CTCCTGGTCCGACCA TERM 1167 1621249 - 1621237 - g 72 -3.3 -4.62302 | overlap 1621227 CAAGAGCCTGAAAAA GCCGA TCA TCGTC CTGGCCTTCCTGTTC Caul_1529 1619891 - 1621390 + | lipopolysaccharide biosynthesis protein TERM 1168 1621711 - 1621669 - g 74 -12.4 -3.60971 | opp_overlap 1621669, overlap 1621670 ATTTGAACGTGGAAA TGGCCGAGCTGTGGGGAGCC CTG GGCGCCCCCGCGCCCGGCCG CGCCCACATCGTCCA TERM 1169 1621710 - 1621670 - g 74 -15.9 -2.76261 | opp_overlap 1621669, overlap 1621669 TTTGAACGTGGAAAT GGCCGAGCTGTGGGGAGCC CTG GGCGCCCCCGCGCCCGGCC GCGCCCACATCGTCC Caul_1530 1621647 - 1622348 + | hypothetical protein Caul_1531 1622345 - 1623604 + | O-antigen polymerase Caul_1532 1623812 - 1624144 + | hypothetical protein Caul_1533 1624250 - 1624663 + | LuxR family transcriptional regulator Caul_1534 1624791 - 1625330 + | hypothetical protein Caul_1535 1625667 - 1625527 - | hypothetical protein TERM 1170 1625757 - 1625728 - R 74 -4.9 -4.57569 | opp_overlap 1625756, overlap 1625729 1625755 GGAGCGGGTTAAAAA TCCGCGATCCGAA GGCT TCCGGATAACGGT CCACGCGAAGCGCTT Caul_1536 1626787 - 1626014 - | polysaccharide deacetylase Caul_1537 1627725 - 1626787 - | glycosyl transferase family protein Caul_1538 1629164 - 1627722 - | polysaccharide biosynthesis protein Caul_1539 1630694 - 1629174 - | undecaprenyl-phosphate glucose phosphotransferase Caul_1540 1632078 - 1631068 - | alcohol dehydrogenase Caul_1541 1633764 - 1632214 - | Alpha-L-fucosidase TERM 1171 1634536 - 1634502 - g 70 -9.3 -3.88787 | opp_overlap 1634501, overlap 1634507 GGATATCTTCAGAAA TCGAAGGCGACCG ACCGCTATA CGGTCGCCTACAA GCTTCTCGACCTCGC TERM 1172 1634723 - 1634771 + G 82 -11.8 -4.13767 | gap 1 TGCGCTGAAGGTCGG CGCCCAGATCGACATCGTCGGAA GCTG TTCCGGCCAGGTC-ATCTTGGCG TTTTCGAATGACCAG Caul_1542 1634313 - 1635095 + | IclR family transcriptional regulator Caul_1543 1635507 - 1635151 - | hypothetical protein TERM 1173 1635584 - 1635594 + r 73 -8.2 -4.07885 | opp_overlap 1635584 CGATTGCCGGAACGA GGCG CGT CGCC TTTTCGAAGACCATC Caul_1544 1636491 - 1635757 - | short-chain dehydrogenase/reductase SDR Caul_1545 1637709 - 1636498 - | Altronate dehydratase TERM 1174 1636945 - 1636987 + g 79 -4.7 -4.72497 | gap 1, overlap 1636947 CGGCTTGAGGATGCC GACGATCGGCGCCGA-ACCG GACT TGGAATAGGCGCCCATCGAC TTTTCTTCCTGGGTG TERM 1175 1637218 - 1637172 - G 78 -16.5 -3.01712 | gap 1 CGGTCTCCTCGAAGA CGCAGGCCGCGCCCTCG-GCGC CCAG GCGGTCGAAGGCGCGACCGACG GCGGGGTTGGCGGTG Caul_1546 1638008 - 1637712 - | D-galactarate dehydratase/altronate hydrolase-like protein Caul_1547 1639065 - 1638019 - | pyridoxal 4-dehydrogenase Caul_1548 1639832 - 1639062 - | IclR family transcriptional regulator TERM 1176 1639777 - 1639813 + g 82 -11.6 -4.16842 | TCCAGGACGTCCAGA CCCTTTTCAAGGGCCG GAGCA CGGTACTTGGAGAGGG TTTCTTCGGACTCGA Caul_1549 1640664 - 1639837 - | amidohydrolase 2 Caul_1550 1640756 - 1640658 - | hypothetical protein Caul_1551 1642064 - 1640760 - | L-fucose transporter TERM 1177 1642044 - 1642054 + g 86 -2.4 -5.1101 | CGCGAACGTGGTCCT TCCC TGC GGGC TTTTTTCCATGGTGC Caul_1552 1642343 - 1642753 + | hypothetical protein Caul_1553 1643418 - 1642780 - | anti-ECFsigma factor, ChrR Caul_1554 1644044 - 1643415 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1178 1643826 - 1643856 + g 77 -14.6 -3.14132 | GGCGTCCTGGGCGAA GTCTTCGGCCGCGC TAG GCGCGGCCCCGGAC TTGATCAGCCAGGCC TERM 1179 1645471 - 1645437 - g 100 -15.8 -4.07568 | gap 1, opp_overlap 1645457 CTGGGCCGTCGAAAA CGAGAGCGGGCG-CA TTCATC TGTCGCCCGCTCCCG CGCGCGCGATGGAGG Caul_1555 1644160 - 1645497 + | amine oxidase Caul_1556 1645494 - 1646297 + | hypothetical protein Caul_1557 1646617 - 1647126 + | hypothetical protein Caul_1558 1647184 - 1648023 + | hypothetical protein Caul_1559 1648526 - 1649203 + | hypothetical protein TERM 1180 1649415 - 1649426 + G 84 -7.2 -4.72272 | opp_overlap 1649397 ACCGACCTGGCCAAC GCCG TCTA CGGC TTTTTCCTCAACGGC Caul_1560 1649205 - 1650422 + | tail sheath protein Caul_1561 1650459 - 1650923 + | phage tail protein Caul_1562 1650927 - 1652249 + | hypothetical protein TERM 1181 1652316 - 1652356 + G 72 -14 -3.14344 | gap 2, opp_overlap 1652305 1652306 AGAACCTCGAAGCGC GCCGCACCGCCGGCCTGAGG ACC CGTCAGGGCGGCGG--CGGC TTCCTGACCGGCGTG TERM 1182 1652580 - 1652599 + G 70 -12.8 -3.25823 | opp_overlap 1652557 CCGCCGACGGCTTCG CCGCGCCG CCGA CGGTGCGG TTCATCTGGGGCAAA Caul_1563 1652237 - 1653013 + | hypothetical protein Caul_1564 1653010 - 1654524 + | hypothetical protein Caul_1565 1654527 - 1654871 + | hypothetical protein Caul_1566 1654874 - 1655311 + | GPW/gp25 family protein Caul_1567 1655311 - 1657842 + | hypothetical protein TERM 1183 1657939 - 1657882 - g 73 -12.7 -3.53012 | gap 1, overlap 1657910 1657911 GCTTGCTCCCGGAAA TCTATCA-GGCCGCCGTCACGCCGAACA ATC CGCTCGGCGCGACGCTGGCGGTGATGGA GTCGCTGCAGGCGCC Caul_1568 1657845 - 1658387 + | hypothetical protein Caul_1569 1658412 - 1659794 + | PASTA domain-containing protein Caul_1570 1659853 - 1660905 + | PASTA domain-containing protein Caul_1571 1660959 - 1661936 + | hypothetical protein Caul_1572 1661946 - 1662557 + | hypothetical protein Caul_1573 1663298 - 1662561 - | hypothetical protein Caul_1574 1663560 - 1664513 + | VacJ family lipoprotein Caul_1575 1664510 - 1665181 + | toluene tolerance family protein Caul_1576 1665237 - 1665755 + | hypothetical protein TERM 1184 1665920 - 1665939 + G 81 -4.2 -4.87665 | gap 1 CCAGTCAGTTCCTGC GCCAGCTGG TCG CCATC-GGC TTTTTCTCGCTGCCG Caul_1577 1665757 - 1666563 + | hypothetical protein Caul_1578 1666560 - 1667342 + | ABC transporter related Caul_1579 1667369 - 1667809 + | hypothetical protein Caul_1580 1667904 - 1668608 + | glutathione S-transferase domain-containing protein Caul_1581 1668784 - 1670955 + | methyltransferase Caul_1582 1671242 - 1671033 - | hypothetical protein Caul_1583 1671419 - 1671252 - | hypothetical protein Caul_1584 1671535 - 1672206 + | hypothetical protein Caul_1585 1672998 - 1672207 - | hypothetical protein Caul_1586 1674570 - 1673086 - | integral membrane sensor signal transduction histidine kinase Caul_1587 1675352 - 1674567 - | two component transcriptional regulator Caul_1588 1676181 - 1675468 - | beta-lactamase domain-containing protein TERM 1185 1676244 - 1676217 - R 100 -19.2 -4.55128 | ATCTCCAAACGAAAA CGGGCGGAGATC CGAA GACCTCCGCCCG TTCGAACTAAGGCTT Caul_1589 1677891 - 1676272 - | amino acid permease-associated region TERM 1186 1677923 - 1677906 - H 74 -14.1 -2.87344 | TATTTCCTCCAGAGA CCCGGGG CTCC CCCCGGG GCGCCCGCATAGACA Caul_1590 1678131 - 1680608 + | ATP-dependent helicase HrpB Caul_1591 1680971 - 1681114 + | hypothetical protein Caul_1592 1683121 - 1681310 - | peptidase M24 TERM 1187 1682930 - 1682899 - G 72 -13.6 -3.1552 | opp_overlap 1682899, overlap 1682897 GGCCATCGACGAACA CGGCGGCGCGGTCC TTGA GGATCACGCCGGCG CCCGCCGAGCCGGTG Caul_1593 1683598 - 1683164 - | hypothetical protein Caul_1594 1684530 - 1683664 - | ribosomal L11 methyltransferase Caul_1595 1685951 - 1684548 - | O-antigen polymerase Caul_1596 1686529 - 1686059 - | hypothetical protein Caul_1598 1688774 - 1687785 - | proline iminopeptidase Caul_1599 1688892 - 1689140 + | hypothetical protein Caul_1600 1689429 - 1690367 + | transposase IS116/IS110/IS902 family protein Caul_1601 1691391 - 1690405 - | alpha/beta hydrolase fold TERM 1188 1691523 - 1691502 - H 71 -5.7 -4.26634 | AAAACAAGCGTAAAA GCGCCGCCA TGAC CGACGCCGC CCAGCCCGTTCCCGC Caul_1602 1691510 - 1692736 + | Bcr/CflA subfamily drug resistance transporter TERM 1189 1692783 - 1692829 + T 73 -13.1 -3.19371 | gap 2 AGCGCGCAGCGCGCT GATCCGGGACCGACGCGTGAACT CAG AGCTTCCG-G-CGGTCCCGGATC TTCGCTTCGCTACGT Caul_1603 1693249 - 1692869 - | hypothetical protein Caul_1604 1693986 - 1693246 - | integral membrane protein TerC Caul_1605 1695737 - 1694028 - | hypothetical protein Caul_1606 1696662 - 1695826 - | RNA methyltransferase TERM 1190 1696695 - 1696751 + H 100 -10 -4.93177 | gap 1 TTTGGGGCCCCGAGG GTTTCCACGAG-CCAGGGCGGCGCTGC TTTA GCATCGTCTCACGGGTCTCGAGGAAGC TTTTGTTCCTTTTTC Caul_1607 1697121 - 1698311 + | elongation factor Tu TERM 1191 1698380 - 1698344 - T 100 -17.4 -3.65351 | gap 1, opp_overlap 1698349, overlap 1698349 CTAGGCTGACCTAAA GC-GAAGGCCCCGGAGA GCAA TCTCCGGGGCCTTTTGC TTTGGAGCTCGCCCC TERM 1192 1698374 - 1698349 - T 95 -20.5 -3.29324 | opp_overlap 1698349, overlap 1698344 CTGACCTAAAGCGAA GGCCCCGGAGA GCAA TCTCCGGGGCC TTTTGCTTTGGAGCT TERM 1193 1698349 - 1698374 + T 100 -20.5 -4.55128 | opp_overlap 1698349 1698344 CTGACCTAAAGCGAA GGCCCCGGAGA GCAA TCTCCGGGGCC TTTTGCTTTGGAGCT TERM 1194 1698481 - 1698438 - T 72 -4.4 -4.56597 | gap 1, opp_overlap 1698467, overlap 1698460 TTTGCTGCGGAAAAA TCTGTCA-TCCCGGACAAGCG AAG CGCAGATCCGGGACCGCCGGA AGCGCCGAGTTCGCG TERM 1195 1698516 - 1698460 - T 76 -13.5 -3.23274 | opp_overlap 1698467, overlap 1698438 TCCCGGACAAGCGAA GCGCAGATCCGGGACCGCCGGAAGCGC CGA GTTCGCGCGTCGGTCCCGGATCTTCAC GCTGCGCGCTCGTCC Caul_1608 1700253 - 1698589 - | cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase Caul_1609 1700377 - 1701192 + | formate dehydrogenase family accessory protein FdhD Caul_1610 1701192 - 1703483 + | oxidoreductase alpha (molybdopterin) subunit Caul_1611 1703742 - 1704584 + | hypothetical protein TERM 1196 1704643 - 1704606 - T 100 -17.7 -4.13246 | opp_overlap 1704608 1704612, overlap 1704612 CACGCTATATATAAA GTGAAACGCCCCGGAGC CTGA GCTCCGGGGCGTTCCTG TGTCCGCGTAGGGCG TERM 1197 1704608 - 1704641 + T 100 -22.5 -2.88544 | opp_overlap 1704606 1704612, overlap 1704612 CGCTATATATAAAGT GAAACGCCCCGGAGC CTGA GCTCCGGGGCGTTCC TGTGTCCGCGTAGGG TERM 1198 1704612 - 1704637 + T 100 -21.9 -3.322 | opp_overlap 1704612 1704606, overlap 1704608 ATATATAAAGTGAAA CGCCCCGGAGC CTGA GCTCCGGGGCG TTCCTGTGTCCGCGT TERM 1199 1704637 - 1704612 - T 100 -21.9 -3.92005 | opp_overlap 1704608 1704612, overlap 1704606 ATATATAAAGTGAAA CGCCCCGGAGC CTGA GCTCCGGGGCG TTCCTGTGTCCGCGT Caul_1612 1705433 - 1704672 - | hypothetical protein TERM 1200 1705178 - 1705192 + g 74 -11.4 -3.76402 | opp_overlap 1705177 TGGTCAGGTGAACAG CCGTCG AGG CGACGG TTTCGTCGCTCAGGT TERM 1201 1705489 - 1705515 + H 74 -9.3 -3.89614 | overlap 1705490 GGTCGTTTGGGGAGG GCCGCCCGTCC GTCGA GGAGGGGCGGA TTTATGGAGCTTCGC TERM 1202 1705490 - 1705514 + H 70 -12.8 -2.93447 | overlap 1705489 GTCGTTTGGGGAGGG CCGCCCGTCC GTCGA GGAGGGGCGG ATTTATGGAGCTTCG TERM 1203 1705738 - 1705705 - H 93 -21.1 -3.01791 | ATGGGGTCTTCAATA TCCGCTCATCCCGGC GAAA GGCGGGATGAGCGGA GAAAGAGGGGAGGGC TERM 1204 1705918 - 1705947 + H 78 -6.9 -4.64861 | overlap 1705919 1705920 CGCAGTTTTCAGTCA CCGGCCCTTGCGG GAGA CCGCTGGGGCCAA TTTGTTTTGCGGACG TERM 1205 1705920 - 1705945 + H 71 -13.9 -2.62579 | overlap 1705919 1705918 CAGTTTTCAGTCACC GGCCCTTGCGG GAGA CCGCTGGGGCC AATTTGTTTTGCGGA Caul_1613 1706047 - 1706355 + | 30S ribosomal protein S10 TERM 1206 1707027 - 1707015 - g 71 -10.5 -3.7282 | TGACGCGATCAAGAA GGCCG CTC CGGCC GACCTGCCGCGTCCG Caul_1614 1706371 - 1707141 + | 50S ribosomal protein L3 Caul_1615 1707141 - 1707779 + | 50S ribosomal protein L4 TERM 1207 1708032 - 1708022 - g 82 -3.2 -5.0538 | TCCGATGTCAAAAAA GCCA TCG TGAC CCTGGCCGAAGGCCA Caul_1616 1707779 - 1708075 + | 50S ribosomal protein L23 Caul_1617 1708080 - 1708919 + | 50S ribosomal protein L2 TERM 1208 1709000 - 1708976 - g 74 -12.8 -3.62046 | GTACCTCCTGAAGAA GGCCGACGCC GCTCT GGCGTCGGGC CGCAAGGATGTGATC Caul_1618 1708923 - 1709201 + | ribosomal protein S19 Caul_1619 1709205 - 1709585 + | 50S ribosomal protein L22 TERM 1209 1709965 - 1709916 - g 93 -17.2 -3.60792 | gap 1, opp_overlap 1709961 TCCGCAAGCCCGAAA CCGACGCCC-AGCTGGTGGCCGA GTCCA TCGCCCAGCAGCTCGAGCGCCGG ATCGCCTTCCGTCGC Caul_1620 1709585 - 1710334 + | 30S ribosomal protein S3 Caul_1621 1710347 - 1710787 + | 50S ribosomal protein L16 Caul_1622 1710784 - 1710978 + | ribosomal protein L29 TERM 1210 1711189 - 1711224 + G 79 -14.8 -3.26319 | opp_overlap 1711197 CGCTCCGAAGTCCAA GCTGAAGACCTGGGAA GTCC TTCCCAAGGCTTCAGC TTAATCTGGAAGGTT Caul_1623 1710989 - 1711228 + | ribosomal protein S17 Caul_1624 1711246 - 1711614 + | ribosomal protein L14 Caul_1625 1711614 - 1711928 + | ribosomal protein L24 Caul_1626 1711921 - 1712478 + | 50S ribosomal protein L5 TERM 1211 1712545 - 1712513 - g 89 -7 -4.88918 | gap 1, opp_overlap 1712513, overlap 1712515 CCATGGCAAAGAAAA GCGCCGTTAACCGCA ATCT CGCGGTCAA-GGCCC TCGTTAAGCAGTATG Caul_1627 1712500 - 1712805 + | ribosomal protein S14 Caul_1628 1712816 - 1713214 + | ribosomal protein S8 TERM 1212 1713513 - 1713554 + G 77 -11.5 -3.85817 | gap 1, opp_overlap 1713528 GGTGGGCGTTGGTTA CCGCGCCGCGATGAAGGGCG ATG CGCTCTCCATC-CAGCTCGG TTTCTCCCACGACGT TERM 1213 1713732 - 1713674 - g 75 -9.5 -4.08394 | gap 2, opp_overlap 1713663 1713684 AGATTGCCGCGAAAA TTCGCC-GCAT-TCGTCCGCCCGAGCCCT ACA AGGGCAAAGGCGTGCGGTATGCTGGCGAA AAGGTTCGCCGCAAG Caul_1629 1713232 - 1713765 + | 50S ribosomal protein L6 Caul_1630 1713769 - 1714125 + | ribosomal protein L18 TERM 1214 1714197 - 1714177 - g 72 -8.9 -4.10007 | overlap 1714167 1714166 1714178 AGAAGGCGGCCAAAA CCGCGGCCG TCG CGACCGCAA CGCCCCCGAAGAGCG Caul_1631 1714136 - 1714741 + | 30S ribosomal protein S5 Caul_1632 1714745 - 1714936 + | ribosomal protein L30 TERM 1215 1714961 - 1714984 + F 100 -16 -4.56914 | opp_overlap 1714959 1714958 GAGACGTCGAAATCG CCACCCCGGT GAAA GCCGGGGTGG TTTTCGTTTAGGTCC Caul_1633 1715063 - 1715548 + | ribosomal protein L15 TERM 1216 1715687 - 1715649 - f 100 -22.7 -3.54653 | gap 1, opp_overlap 1715650, overlap 1715651 ATCGGGATGACAGAA TA-GTGAGGCTCGCCGTG ACAT CACGGCGAGCCTCACCTA TGTACGGCTCCGTAC TERM 1217 1715650 - 1715685 + F 100 -23.4 -2.88663 | opp_overlap 1715649 1715651 TCGGGATGACAGAAT AGTGAGGCTCGCCGTG ACAT CACGGCGAGCCTCACC TATGTACGGCTCCGT TERM 1218 1715684 - 1715651 - f 100 -26.9 -3.34902 | opp_overlap 1715650, overlap 1715649 CGGGATGACAGAATA GTGAGGCTCGCCGTG ACAT CACGGCGAGCCTCAC CTATGTACGGCTCCG Caul_1634 1715816 - 1717174 + | preprotein translocase subunit SecY TERM 1219 1717238 - 1717204 - f 100 -17.2 -3.73068 | opp_overlap 1717205 1717206, overlap 1717205 1717227 TGCGTAAGGCAAGAA CGCGGAAGCCGGTTTG TCA CAAACCGGCTTCCGTT TTTATCGAACCCACT TERM 1220 1717237 - 1717205 - f 93 -20.7 -2.8352 | opp_overlap 1717205 1717206, overlap 1717204 1717227 GCGTAAGGCAAGAAC GCGGAAGCCGGTTTG TCA CAAACCGGCTTCCGT TTTTATCGAACCCAC TERM 1221 1717206 - 1717236 + F 100 -24.2 -4.82901 | opp_overlap 1717205 1717204 1717227, overlap 1717205 CGTAAGGCAAGAACG CGGAAGCCGGTTTG TCA CAAACCGGCTTCCG TTTTTATCGAACCCA Caul_1635 1717308 - 1717877 + | adenylate kinase TERM 1222 1717964 - 1718022 + F 78 -12.4 -3.767 | gap 3, opp_overlap 1717963 1717962 1717996 1717999, overlap 1717965 CGCTTCCGCGAAAGG G-CGCGATCTGTGCGCGCCGGACTGGGTC GAAA GACCGGG-CCGG-GCGCGCCGTTCGCGTC TTTAGTGCGTGACTA TERM 1223 1717965 - 1718020 + F 89 -16.1 -3.46647 | gap 2, opp_overlap 1717963 1717962 1717996 1717999, overlap 1717964 GCTTCCGCGAAAGGG CGCGATCTGTGCGCGCCGGACTGGGTC GAAA GACCGGG-CCGG-GCGCGCCGTTCGCG TCTTTAGTGCGTGAC Caul_1636 1718052 - 1718420 + | 30S ribosomal protein S13 Caul_1637 1718434 - 1718823 + | 30S ribosomal protein S11 TERM 1224 1719790 - 1719753 - g 74 -13.5 -3.36327 | gap 1 CGACCTGATCCAGAA GACCGAAGC-CGAGATGC TCC GCACCCCGAACTTCGGCC GCAAGTCCTTGAACG Caul_1638 1718899 - 1719915 + | DNA-directed RNA polymerase subunit alpha TERM 1225 1719941 - 1719975 + F 78 -10.6 -4.07568 | opp_overlap 1719964, overlap 1719942 1719964 CCGAGTACCGCGCTT AATCCGGGCCGCTCTT TCA GAGAGCGGCCTGGGCC TTTTGAAGCCGCAAC TERM 1226 1719942 - 1719974 + F 75 -14.1 -3.04398 | opp_overlap 1719964, overlap 1719941 1719964 CGAGTACCGCGCTTA ATCCGGGCCGCTCTT TCA GAGAGCGGCCTGGGC CTTTTGAAGCCGCAA Caul_1639 1720105 - 1720518 + | 50S ribosomal protein L17 TERM 1227 1720566 - 1720545 - f 100 -17.3 -4.18018 | opp_overlap 1720545 TCGGCTGACGGAAAA GGCCCCGGA GCGA TCCGGGGCC TTTTTTGCGTCTTCG TERM 1228 1720545 - 1720566 + F 100 -17.3 -5.1615 | opp_overlap 1720545 TCGGCTGACGGAAAA GGCCCCGGA GCGA TCCGGGGCC TTTTTTGCGTCTTCG Caul_1640 1720686 - 1722488 + | methyl-accepting chemotaxis sensory transducer Caul_1641 1723314 - 1722499 - | hypothetical protein Caul_1642 1724209 - 1723304 - | ABC transporter related TERM 1229 1723798 - 1723778 - G 71 -2.3 -4.56597 | opp_overlap 1723781 1723784, overlap 1723780 GGGGCGGGTGAAAAA CGCCGCCGC CAG GCCCAGGCG CTGTTTCATGCCGAC Caul_1643 1724367 - 1725602 + | nucleotide diphosphatase TERM 1230 1725662 - 1725704 + F 81 -15.7 -3.04144 | gap 2, opp_overlap 1725645, overlap 1725649 CCGCGGGGCCGCCGA TCCGGGACCGCCG-GC-AGCT CTG AGTTCGCGCGTCGGTCCCGGA TCTTCGCCCTGCGCG Caul_1644 1725801 - 1726253 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_1645 1726250 - 1726618 + | hypothetical protein Caul_1646 1726615 - 1726959 + | ArsR family transcriptional regulator Caul_1647 1726956 - 1727459 + | activator of HSP90 ATPase 1 family protein TERM 1231 1728231 - 1728217 - g 73 -7.8 -4.1822 | opp_overlap 1728229 TTTGACTGGAAGAAA GCCAAC CCC GTCGGC TCGCTGAACCTGCTT Caul_1648 1727596 - 1728843 + | major facilitator transporter TERM 1232 1730070 - 1730030 - g 72 -14 -3.14344 | overlap 1730050 CACGGTGCTGATCAA CCGCGGCG-GCAGGGAGCAG ACC CTGA-CCCTGCGCGCCGAGG CCGCGCCGGAGAGCC Caul_1649 1728972 - 1730396 + | protease Do TERM 1233 1730628 - 1730575 - g 74 -10.7 -3.7732 | gap 1, opp_overlap 1730587 CGCCGACACTAACAA GGTCGGAGCCGCCCCCCGTGGCCGCG CCC CGCGACGCCGGTGGTTGGCTC-GCCC GGTCCTATGTCGAGC Caul_1650 1730487 - 1731869 + | TPR repeat-containing protein Caul_1651 1731952 - 1733253 + | recombination factor protein RarA TERM 1234 1733530 - 1733563 + G 73 -13.1 -3.53343 | gap 1 GCCTGACCCTGGCCG CGTGC-GCCGGGGTCG TCG CGACTCTGGCCGCCCG TTTCGGCGCACGGTT Caul_1652 1733250 - 1734032 + | hypothetical protein Caul_1653 1734093 - 1734317 + | hypothetical protein Caul_1654 1734399 - 1735259 + | pseudouridine synthase Caul_1655 1735279 - 1735776 + | hypothetical protein Caul_1656 1737073 - 1735799 - | hypothetical protein TERM 1235 1737592 - 1737619 + G 86 -2.7 -5.1287 | gap 1, overlap 1737585 1737594 TCCGTGGCGGCCATT TTC-GCGGGC CTCTTGATC GCCCGCAGGA TTTTTTCCGTATGAG Caul_1657 1737247 - 1737633 + | CrcB protein Caul_1658 1737630 - 1738619 + | RluA family pseudouridine synthase TERM 1236 1738659 - 1738706 + F 81 -13.5 -3.5936 | overlap 1738660 1738663 TGAGCACGCCTCAGG GCTGTGACATGCTCCTTCCTC AACCTC GAGGGAGGCGCATGTCATGGG TTTCGCGACTTTCAC TERM 1237 1738660 - 1738705 + F 84 -17 -2.75294 | overlap 1738659 1738663 GAGCACGCCTCAGGG CTGTGACATGCTCCTTCCTC AACCTC GAGGGAGGCGCATGTCATGG GTTTCGCGACTTTCA TERM 1238 1738663 - 1738702 + F 83 -17.3 -2.64651 | overlap 1738660 1738659 CACGCCTCAGGGCTG TGACATGCTCCTTCCTC AACCTC GAGGGAGGCGCATGTCA TGGGTTTCGCGACTT Caul_1659 1738702 - 1738908 + | hypothetical protein TERM 1239 1738935 - 1738883 - T 77 -15.5 -2.56596 | gap 1, opp_overlap 1738887, overlap 1738842 1738879 1738896 TGGTCGACGAAGTGA CCCGCCGGATG-AACGCGGCCGGT TAGTTC ACCCGCCGCGCCGCGCCCGGCAGG TGCAGCGAGAATTCG TERM 1240 1738921 - 1738896 - T 70 -11.8 -3.14344 | opp_overlap 1738887, overlap 1738879 1738883 GACCCGCCGGATGAA CGCGGCCGGT TAGTTC ACCCGCCGCG CCGCGCCCGGCAGGT Caul_1660 1739369 - 1738905 - | ApaG Caul_1661 1740534 - 1739350 - | O-succinylhomoserine sulfhydrylase Caul_1662 1740701 - 1741720 + | 2'-deoxycytidine 5'-triphosphate deaminase Caul_1663 1741791 - 1742666 + | hypothetical protein TERM 1241 1742774 - 1742760 - f 78 -10 -4.07568 | overlap 1742763 TCCTTGTCGGCAAAA CGACTC ACC GAGTCG GCGACAACAGTGGAG Caul_1664 1742798 - 1743100 + | hypothetical protein TERM 1242 1743213 - 1743177 - f 79 -13.8 -3.48395 | opp_overlap 1743179 1743182, overlap 1743182 1743198 ATTGCGGCGATATAA GACAAGCTTCCTTGTC ACAAA GACGAGGAGGCTTGTC ATGTCCGAAGATGTC TERM 1243 1743179 - 1743211 + F 74 -15 -2.62396 | opp_overlap 1743177 1743182 1743198, overlap 1743182 TGCGGCGATATAAGA CAAGCTTCCTTGTC ACAAA GACGAGGAGGCTTG TCATGTCCGAAGATG TERM 1244 1743182 - 1743208 + F 71 -10.9 -3.46602 | opp_overlap 1743177 1743182 1743198, overlap 1743179 GGCGATATAAGACAA GCTTCCTTGTC ACAAA GACGAGGAGGC TTGTCATGTCCGAAG TERM 1245 1743269 - 1743252 - g 75 -4.8 -4.57341 | gap 1, opp_overlap 1743252 1743252 AAGCGGGCTGAAAAA GCTGGCG CTGTT CGCC-GC CTTCATCCTGGCCAT Caul_1665 1743214 - 1743795 + | hypothetical protein Caul_1666 1743809 - 1744003 + | XRE family transcriptional regulator Caul_1667 1744057 - 1744974 + | alpha/beta hydrolase fold Caul_1668 1745017 - 1745901 + | GumN family protein Caul_1669 1746525 - 1745911 - | hypothetical protein TERM 1246 1752877 - 1752911 + G 75 -9.1 -4.19704 | gap 1, overlap 1752871 TGGCCCAGTCGGTCG GCGGCG-GCGGCGGCG GCGG CGGCGACGCCCGCGGC TTTTCGCTGAGCTTC Caul_1670 1746951 - 1756091 + | outer membrane autotransporter TERM 1247 1756148 - 1756190 + F 100 -22.1 -3.54424 | gap 1 TGATACTTCGACGCT TCGCG-CGACGGGGCGGGCT TGTG AGCCCGTCCCGTCGTCGCCA TTTCGGCGCCTAGCC Caul_1671 1756216 - 1756986 + | nucleotidyltransferase family protein TERM 1248 1757219 - 1757247 + F 86 -8.8 -4.66833 | GGTGCTTGAGGATGT CGTTCGCAAGGC GAATA GCTCTGCGGACG TTTTTGCGATTCGAG TERM 1249 1758005 - 1757995 - g 70 -8.2 -3.95324 | overlap 1757996 CACGCCGAAGAAGAA CGCC ATG GGCG GCTTCGACGAAAAGG Caul_1672 1757297 - 1759582 + | TonB-dependent receptor TERM 1250 1759639 - 1759582 - T 95 -19.1 -3.41222 | gap 1, opp_overlap 1759583 1759584, overlap 1759580 1759583 CGCGAAGCTGAAATA GGTGTGGAGCCGCCCTCGATCGTTCCGG CGT CCGGAGCGGTCGAGGGCGG-TCCTCATG CGGTTCTTGGCGCGT TERM 1251 1759583 - 1759641 + T 90 -19.7 -2.77344 | gap 2, opp_overlap 1759580 1759582 1759583, overlap 1759584 GCGAAGCTGAAATAG -GTGTG-GAGCCGCCCTCGATCGTTCCGG CGT CCGGAGCGGTCGAGGGCGGTCCTCATGCG GTTCTTGGCGCGTCA TERM 1252 1759638 - 1759583 - T 100 -22.6 -2.64412 | gap 1, opp_overlap 1759583 1759584, overlap 1759580 1759582 GCGAAGCTGAAATAG GTGTGGAGCCGCCCTCGATCGTTCCGG CGT CCGGAGCGGTCGAGGGCGG-TCCTCAT GCGGTTCTTGGCGCG TERM 1253 1759584 - 1759642 + T 73 -11.2 -3.62597 | gap 4, opp_overlap 1759580 1759583 1759582, overlap 1759583 CGAAGCTGAAATAGG -TGTG-GA-G-CCGCCCTCGATCGTTCCGG CGT CCGGAGCGGTCGAGGGCGGTCCTCATGCGG TTCTTGGCGCGTCAG Caul_1673 1761255 - 1759654 - | hypothetical protein TERM 1254 1759997 - 1760030 + g 71 -2.1 -4.58395 | overlap 1759983 1759982 1759998 1759999 ACGGAGTCGGTGTCT TGGCCGCCGACCCGG ATTT CCAGGCCGGTGGGAG TTTTTCCCGCCTCGA Caul_1674 1763521 - 1761257 - | hypothetical protein Caul_1675 1764120 - 1763665 - | hypothetical protein Caul_1676 1764975 - 1764190 - | hypothetical protein TERM 1255 1764738 - 1764790 + g 71 -11.2 -3.54029 | overlap 1764769 CGGCGGCGGAGGGCA GGCACTGGAGGCTGGCCC-GGATGTT CTC GGCCGCCAGGGCC-GCTTCCAGAGCC TTGTCGTTGGTCGAG Caul_1677 1766131 - 1764980 - | hypothetical protein Caul_1678 1767196 - 1766132 - | permease YjgP/YjgQ family protein TERM 1256 1767014 - 1766973 - G 93 -15.9 -3.86897 | gap 1, overlap 1766978 1766981 GCCAGCTGGGAGAAA GCAAACAG-GCCGCCGGCCA GGG TGGCCAGCGGCGCCACCTGC TCGACCAGGCGCGGC TERM 1257 1767009 - 1766978 - G 86 -13 -4.13995 | gap 1, overlap 1766973 1766981 CTGGGAGAAAGCAAA CAG-GCCGCCGGCCA GGG TGGCCAGCGGCGCCA CCTGCTCGACCAGGC TERM 1258 1767005 - 1766981 - G 81 -19.3 -2.79117 | overlap 1766978 1766973 GGAGAAAGCAAACAG GCCGCCGGCCA GGG TGGCCAGCGGC GCCACCTGCTCGACC Caul_1679 1768422 - 1767193 - | permease YjgP/YjgQ family protein Caul_1680 1768856 - 1768419 - | hypothetical protein Caul_1681 1769945 - 1769022 - | metallophosphoesterase Caul_1682 1770102 - 1771166 + | hypothetical protein Caul_1683 1771166 - 1772083 + | diacylglycerol kinase catalytic region Caul_1684 1772080 - 1773006 + | hypothetical protein TERM 1259 1773210 - 1773189 - T 100 -17.3 -4.72272 | opp_overlap 1773181 1773177 CTGCGCCAGCAAAAA GGCCCGAGG TTTC CCTCGGGCC CTTGGCATTGCATTT Caul_1685 1774462 - 1773245 - | 8-amino-7-oxononanoate synthase Caul_1686 1774717 - 1774466 - | phosphopantetheine-binding TERM 1260 1774776 - 1774809 + r 84 -2.3 -5.37345 | opp_overlap 1774785 1774787, overlap 1774777 1774785 1774787 TGTAACAGCAGTCCT GCCAGAAAATCGCCG TATT CGGCTATTTTCGAGA TTTTTTATCCTTCAA Caul_1687 1775766 - 1774798 - | NAD-dependent epimerase/dehydratase TERM 1261 1775257 - 1775242 - G 83 -8.2 -4.66264 | opp_overlap 1775242 1775241 CAAAACCGGCAAAAA GGCCCC TTCC GAGGCC ATTTTGAACAGTCTG TERM 1262 1775743 - 1775713 - G 73 -10.4 -3.85698 | gap 1 GCGTCGGCCCAGAAA GCCCGTGG-CGCC CGTCAC GGCGACCACCGGC CCGGTCCGGACCCCG Caul_1688 1777475 - 1775769 - | acyl-CoA synthetase Caul_1689 1778833 - 1777475 - | polysaccharide biosynthesis protein TERM 1263 1778586 - 1778615 + g 74 -15.7 -3.01924 | gap 1, opp_overlap 1778603 1778607 TGCTGGAAGCGTGGC CGGTCGCCGGTCAG CAA CGGACCGGCG-CCG TATTGCAGCACCGTC Caul_1690 1779999 - 1778830 - | hypothetical protein Caul_1691 1780616 - 1779996 - | hypothetical protein Caul_1692 1781491 - 1780724 - | pseudouridine synthase TERM 1264 1781153 - 1781169 + g 71 -10.8 -3.57144 | CAGCTTGTTCTCGAA GCCCGG GATGA CCGGGC TTTGGCCGTAGAGCG Caul_1693 1781646 - 1782101 + | hypothetical protein TERM 1265 1782114 - 1782086 - T 72 -12.4 -3.26546 | GGAGAAAGCGATCAA GGCGGCGCGGAA GTAGG TTCCGCACCTCC CACCGTCGTCGTCCC Caul_1694 1783724 - 1782150 - | carboxylesterase type B Caul_1695 1784338 - 1783721 - | peptidyl-prolyl cis-trans isomerase cyclophilin type Caul_1696 1785607 - 1784405 - | beta-ketoadipyl CoA thiolase Caul_1697 1785720 - 1786151 + | GCN5-related N-acetyltransferase Caul_1698 1787835 - 1786192 - | hypothetical protein TERM 1266 1788252 - 1788211 - H 91 -18.7 -3.01712 | opp_overlap 1788217, overlap 1788214 TCCTGTTGGGGAACA GGACGACGGCCCCGGGTCA GCAA TGACCCGGGGCCGTTTTCA TGTTCCGATACCGGT TERM 1267 1788249 - 1788214 - H 87 -19 -2.73875 | opp_overlap 1788217, overlap 1788211 TGTTGGGGAACAGGA CGACGGCCCCGGGTCA GCAA TGACCCGGGGCCGTTT TCATGTTCCGATACC TERM 1268 1788217 - 1788246 + H 100 -25.1 -4.43012 | opp_overlap 1788214 1788211 TGGGGAACAGGACGA CGGCCCCGGGTCA GCAA TGACCCGGGGCCG TTTTCATGTTCCGAT Caul_1699 1788360 - 1788530 + | hypothetical protein Caul_1700 1788642 - 1789661 + | signal transduction histidine kinase Caul_1701 1789735 - 1791615 + | 1A family penicillin-binding protein TERM 1269 1791701 - 1791719 + F 95 -10.2 -4.56775 | TGCCAACCCAACGCC GCGACCCA GAA TGGGACGC TTTTTGGCCGCCCGT Caul_1702 1791850 - 1792788 + | articulin, putative Caul_1703 1792921 - 1793121 + | hypothetical protein TERM 1270 1793301 - 1793328 + F 76 -10.4 -3.94 | opp_overlap 1793271, overlap 1793284 1793285 GGCTGGGCCGCACGT CGCGCCCGCCGC TCTT GCCTTGGGCGCG TTGTTTGCCCATTCA Caul_1704 1793393 - 1794145 + | ATP12 ATPase Caul_1705 1794268 - 1795800 + | carboxyl transferase TERM 1271 1795967 - 1795987 + T 100 -16.9 -4.17023 | ACGCGGCGGGCCCCT CCCTCTCCC GCC GGGAGAGGG TTTTCCCCTACTTCA Caul_1706 1796846 - 1795995 - | hypothetical protein TERM 1272 1797455 - 1797485 + G 72 -8.8 -4.10161 | TTCGTTGCGCGCCGA GCTGACGGCCCGCG CCG CCCACGCCGTCGGC TTTTCGGGCCTGATC Caul_1707 1797012 - 1797923 + | polyprenyl synthetase Caul_1708 1797920 - 1798891 + | ABC transporter related TERM 1273 1799783 - 1799823 + G 82 -16.2 -3.28912 | gap 2 TGTGGCTGCCGACCA CCCTGGCGGCCAGCGCCTGC GCG GCGGG-GCTGGCC-CTGGGG TTGGTCTCGGTCTGC Caul_1709 1798888 - 1800111 + | ABC-2 type transporter Caul_1710 1800133 - 1800606 + | fatty acid hydroxylase Caul_1711 1801773 - 1800844 - | squalene/phytoene synthase Caul_1712 1803284 - 1801770 - | phytoene desaturase TERM 1274 1803142 - 1803156 + g 70 -12.8 -3.29144 | opp_overlap 1803141 TCATGCCAGACATAG GCCCGG CCG CCGGGC TTCTCGCGGCCCTCG Caul_1713 1804468 - 1803281 - | lycopene cyclase TERM 1275 1805410 - 1805364 - g 79 -10.7 -4.02051 | gap 1, overlap 1805355 GACGAAGCGAAAGAA GTCGCCGGCGCCATCAC-CCCG GTGC CGGGCGGGGTGGGGCCGATGAC CATCGCCATGCTGCT Caul_1714 1804578 - 1805474 + | methylenetetrahydrofolate dehydrogenase (NADP(+)) Caul_1715 1805474 - 1805836 + | hypothetical protein Caul_1716 1805856 - 1807256 + | FAD-linked oxidoreductase Caul_1717 1808103 - 1807261 - | methyltransferase TERM 1276 1808186 - 1808153 - R 71 -13.9 -2.52464 | opp_overlap 1808158 1808160, overlap 1808160 GTGCCGCTCAAGCCA GAAAAAAGGCCCCGG CGAA CCGGGACCTCTTGTC GATCGGGTGAATGTC TERM 1277 1808179 - 1808160 - R 100 -12.8 -5.31456 | opp_overlap 1808160 1808158, overlap 1808153 TCAAGCCAGAAAAAA GGCCCCGG CGAA CCGGGACC TCTTGTCGATCGGGT Caul_1718 1808692 - 1808210 - | hypothetical protein Caul_1719 1809636 - 1808812 - | inorganic polyphosphate/ATP-NAD kinase TERM 1278 1808875 - 1808838 - G 72 -8.3 -4.07687 | ATTGCTCCGTCAAAA CCCGCTCCTCGAGGCTG CGGC CGGCGTCGAAGAGCATG GAAAGACTGGCGCTG Caul_1720 1810764 - 1809649 - | hypothetical protein Caul_1721 1810919 - 1812409 + | glycerol kinase Caul_1722 1813136 - 1812459 - | uracil-DNA glycosylase superfamily protein Caul_1723 1813763 - 1813140 - | hypothetical protein Caul_1724 1813820 - 1814314 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1279 1815040 - 1815007 - g 77 -14.6 -3.17688 | overlap 1814995 CAAGGACGCGATGAA GGCGATCCGGGCCA AGTACG TGGCCCATATCGCC AAGATCCTGGCCTTG Caul_1725 1814402 - 1816450 + | endothelin-converting protein 1 TERM 1280 1816622 - 1816643 + T 100 -18.7 -4.7254 | opp_overlap 1816622 TCAGCGTTGACGAGA GGCCCCGCC CGAA GGCGGGGCC TTTTTCATACCGGCT TERM 1281 1816643 - 1816622 - T 87 -18.7 -2.78816 | opp_overlap 1816622 TCAGCGTTGACGAGA GGCCCCGCC CGAA GGCGGGGCC TTTTTCATACCGGCT Caul_1726 1817031 - 1816648 - | hypothetical protein Caul_1727 1817270 - 1817629 + | DNA-directed RNA polymerase subunit omega TERM 1282 1817685 - 1817736 + F 100 -23 -2.88861 | opp_overlap 1817691, overlap 1817691 CGCCGCCGCTCTATC CGAACACGCGCCCGGCGCTCCTCC CAAC GGAGGGGAATCGGGCGCGTTTTCG TCTCTACCGGTCGTC TERM 1283 1817691 - 1817730 + F 100 -19.2 -4.39166 | opp_overlap 1817691, overlap 1817685 CGCTCTATCCGAACA CGCGCCCGGCGCTCCTCC CAAC GGAGGGGAATCGGGCGCG TTTTCGTCTCTACCG TERM 1284 1817730 - 1817691 - f 88 -17 -3.05844 | opp_overlap 1817691 1817685 CGCTCTATCCGAACA CGCGCCCGGCGCTCCTCC CAAC GGAGGGGAATCGGGCGCG TTTTCGTCTCTACCG Caul_1728 1817866 - 1819983 + | (p)ppGpp synthetase I, SpoT/RelA Caul_1729 1821060 - 1820209 - | 2-dehydro-3-deoxyphosphooctonate aldolase Caul_1730 1821529 - 1821116 - | NUDIX hydrolase Caul_1731 1821729 - 1821490 - | hypothetical protein Caul_1732 1822004 - 1822588 + | orotate phosphoribosyltransferase Caul_1733 1822594 - 1823349 + | pyridoxal phosphate biosynthetic protein PdxJ Caul_1734 1823346 - 1823747 + | 4'-phosphopantetheinyl transferase Caul_1735 1823838 - 1824014 + | hypothetical protein Caul_1736 1824141 - 1824989 + | signal peptidase I Caul_1737 1825139 - 1825837 + | ribonuclease III Caul_1738 1825846 - 1826835 + | GTP-binding protein Era TERM 1285 1827821 - 1827774 - g 72 -9 -3.99374 | gap 1, overlap 1827775 TGCGATGAAGAACAA CCGC-CTGACCCACCGCGACGCC GCC GGCGTCCTGGTCGAGCAGCGCGA CCTGTCGGTCGACGA Caul_1739 1827058 - 1827933 + | arylamine N-acetyltransferase Caul_1740 1828090 - 1828821 + | DNA repair protein RecO Caul_1741 1829280 - 1828825 - | MarR family transcriptional regulator Caul_1742 1829371 - 1829745 + | hypothetical protein TERM 1286 1831110 - 1831151 + G 77 -15.7 -3.14564 | opp_overlap 1831092, overlap 1831147 GCCGGCGAGCTGCAG CTGGACGGCGCCCATCCGG ACGC CCGGCCGGTCGCCGTCGAG TTCGTCACCACCTCG Caul_1743 1829814 - 1831403 + | alkaline phosphatase Caul_1744 1831687 - 1833966 + | DNA topoisomerase IV subunit A TERM 1287 1834056 - 1834001 - f 83 -15.4 -3.20723 | gap 1, opp_overlap 1834034 CCCGGACGAAGCCAA GCGTGCATCGGAGACCG-CCGGAAGCG CCG CGCTTCGGGTCGGTCTCGGATCGGCGC GCTGCGCGCCAATCC TERM 1288 1834034 - 1834083 + F 85 -14.3 -3.59979 | gap 1, opp_overlap 1834001 CGGAAGCGCCGCGCT TCGGGTCGGTCTCGGATCGGCGCG CTG CGCGCCAATCCGGGAT-GACAGGA TTTAAGATGACCAAG Caul_1745 1834090 - 1835454 + | beta-lactamase TERM 1289 1835712 - 1835734 + G 73 -12 -3.53012 | TGTCGTGCTGGCCAC GATCCCGGTC GGC GACCTGGATC TTTCCCGCCCCGACG Caul_1746 1835584 - 1835928 + | hypothetical protein TERM 1290 1836376 - 1836401 + F 74 -13.4 -2.84325 | overlap 1836345 1836374 1836371 TGGCGCCTGACGCTA TCCTTCTCCC GCAAGG GGGAGAAGGA TCATGTTTACGGGGA TERM 1291 1836916 - 1836959 + F 100 -16 -4.07246 | gap 1, opp_overlap 1836926 1836927 AAGCGGCCAAGCCGT GCGCC-CATAAGGCCTCCCCT ACA GGGGGAGGCTCTAGGCGGCGC TTTCGTTTCCGGTCC TERM 1292 1836947 - 1836927 - f 71 -14 -2.57132 | opp_overlap 1836916, overlap 1836926 CCGTGCGCCCATAAG GCCTCCCC TACAG GGGGAGGC TCTAGGCGGCGCTTT Caul_1747 1837019 - 1838728 + | methionyl-tRNA synthetase Caul_1748 1838904 - 1840097 + | major facilitator transporter Caul_1749 1842168 - 1840240 - | bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein Caul_1750 1843155 - 1842169 - | sulfate adenylyltransferase subunit 2 TERM 1293 1842529 - 1842562 + g 79 -15.3 -3.33261 | opp_overlap 1842531 GTTGGAGATCGGGAA CACCCGCAGGCTTTC GCCG GGATGCTTGCGGGTG TTGTAGAGCTTCCAC TERM 1294 1843192 - 1843164 - H 71 -5.8 -4.35524 | overlap 1843166 TCCGCAAATGGAAAA CTCCGCCCACGC ACGAG GCGCGGATGGGG CAATGATCCTGTGCG TERM 1295 1844022 - 1844001 - g 76 -14.4 -3.53012 | opp_overlap 1844002 1844019 CGCCCGCGCCGGAAA CGCCGCGC GCCAAT GCGCGGCG CGGCTTCTTCGCGAG TERM 1296 1844002 - 1844026 + G 71 -10.7 -3.61398 | gap 1, opp_overlap 1844001, overlap 1844019 GCCCGCGCCGGAAAC GCCGCG-CGC CAATGC GCGGCGCGGC TTCTTCGCGAGCGCG TERM 1297 1846189 - 1846219 + G 78 -16.9 -3.02144 | gap 2, overlap 1846207 CCGCTCGGTGTTCGA CGCCGCGGGCGGTCG CAC CG-CCGCCC-CGGCG TCTTCGGCCCCGTCC Caul_1751 1843748 - 1846669 + | hypothetical protein Caul_1752 1846686 - 1847246 + | sugar transferase Caul_1753 1848826 - 1847369 - | mannitol dehydrogenase domain-containing protein Caul_1754 1850367 - 1848823 - | Altronate dehydratase TERM 1298 1849429 - 1849447 + g 71 -11.6 -3.58533 | overlap 1849440 GGGGATCTCGGTCAG CACCGGCG TAC CGCCGGCG TTTGAGACCTTGTCG TERM 1299 1851520 - 1851478 - g 79 -11.3 -4.07885 | gap 1 CATCGCCGCCGAAAA GCTGATCGGCGCCGCGGTTC GCGA GAAGCGCGACCCCAA-CAGC ACCATTCCCTATCTT Caul_1755 1850492 - 1851574 + | LacI family transcription regulator TERM 1300 1852137 - 1852147 + G 70 -8.2 -3.9243 | overlap 1852123 CCACCGAGGCCTTCC GGCC CCG GGCC TTGTTTGACCGCTTC Caul_1756 1851680 - 1853146 + | glucuronate isomerase Caul_1757 1853162 - 1854013 + | 5-keto-4-deoxyuronate isomerase TERM 1301 1854065 - 1854118 + F 74 -12.4 -3.53012 | opp_overlap 1854069, overlap 1854066 1854099 CCGGCCGTAGCGAAG CGAAGAGCCGGGACCGCCG-GACACG CATG CGT-TCGCGGCGGTCCCGGATCGGCC TTTAAGGCCGCCCGG TERM 1302 1854066 - 1854117 + F 78 -15.9 -2.71712 | opp_overlap 1854069, overlap 1854065 1854099 CGGCCGTAGCGAAGC GAAGAGCCGGGACCGCCG-GACACG CATG CGT-TCGCGGCGGTCCCGGATCGGC CTTTAAGGCCGCCCG TERM 1303 1854114 - 1854069 - f 95 -21.1 -3.19192 | opp_overlap 1854066 1854065 1854099 CCGTAGCGAAGCGAA GAGCCGGGACCGCCGGACACG CATG CGTTCGCGGCGGTCCCGGATC GGCCTTTAAGGCCGC Caul_1758 1854164 - 1854931 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1304 1856623 - 1856633 + G 72 -6.8 -4.25104 | CTTGTCGGACATCCT CGAG CCG CTCG TTTTGCTCAAGCAGG Caul_1759 1855115 - 1857832 + | phosphoenolpyruvate carboxylase TERM 1305 1858132 - 1858099 - f 71 -10.9 -3.53012 | opp_overlap 1858100 1858101, overlap 1858100 TCGCTCCTGCGCAAA CTTCGGGCGTCGGGC TTCG GCTCGACGCCCAATA TTTTGAGAACCGCGC TERM 1306 1858100 - 1858132 + F 78 -10.6 -4.07568 | gap 1, opp_overlap 1858100 1858099, overlap 1858101 CGCTCCTGCGCAAAC T-TCGGGCGTCGGGC TTCG GCTCGACGCCCAATA TTTTGAGAACCGCGC TERM 1307 1858101 - 1858130 + F 86 -15.7 -3.63744 | opp_overlap 1858100 1858099, overlap 1858100 GCTCCTGCGCAAACT TCGGGCGTCGGGC TTCG GCTCGACGCCCAA TATTTTGAGAACCGC Caul_1760 1858357 - 1859031 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase Caul_1761 1859032 - 1860138 + | ribokinase-like domain-containing protein TERM 1308 1860168 - 1860191 + F 100 -13.1 -4.78107 | opp_overlap 1860168 1860160 CACCGAACGCACATA GCCCCCGGT CGCAAA GCCGGGGGC TTTTTGCTGCTCGTG TERM 1309 1860456 - 1860477 + F 70 -7.9 -3.97947 | gap 1 GGGGAGGGGTGCGGA GC-GCCGGGC TGG GCCCGGAAGC TTTGTAGTGAATACC Caul_1762 1861123 - 1861314 + | hypothetical protein TERM 1310 1861408 - 1861464 + F 89 -17.1 -3.23274 | opp_overlap 1861381 1861380 1861415 GGACGAGCGCGCGGC GCGAAGATCCGGGACCGACGCCTGAGC TCA GTGCTTCCGGCGGTCCCGGATCTGCGC TTGGCTTGTCCGGGA Caul_1763 1861755 - 1863731 + | penicillin-binding protein 2 Caul_1764 1864349 - 1863867 - | hypothetical protein Caul_1765 1865383 - 1864346 - | oxidoreductase domain-containing protein TERM 1311 1865437 - 1865414 - R 100 -16 -4.72272 | opp_overlap 1865411 1865414 TCTCCCCACGAAAAA GCCCCCGATC TCGC GACCGGGGGC TGGTTCTTCAGGCGC TERM 1312 1865414 - 1865437 + r 74 -13.8 -2.93073 | opp_overlap 1865414, overlap 1865411 TCTCCCCACGAAAAA GCCCCCGATC TCGC GACCGGGGGC TGGTTCTTCAGGCGC Caul_1766 1866739 - 1865465 - | major facilitator transporter Caul_1767 1867617 - 1866802 - | 2-keto-4-pentenoate hydratase, putative TERM 1313 1867717 - 1867684 - H 74 -10.4 -3.80625 | gap 1, overlap 1867712 CGTCCATAATGGAAA CCGGTGTCA-TTGAC AATCG GCCAAGCGACACCGG TGGCAGGGGATTGTC Caul_1768 1867765 - 1868172 + | hypothetical protein Caul_1769 1868191 - 1870947 + | ATP-dependent DNA ligase Caul_1770 1870979 - 1871719 + | virulence factor family protein Caul_1771 1871806 - 1872594 + | HAD family hydrolase Caul_1772 1872591 - 1874033 + | Alpha,alpha-trehalose-phosphate synthase (UDP-forming) TERM 1314 1875005 - 1875049 + G 89 -2.6 -5.29385 | opp_overlap 1874984 1874985 1874999 1875020 GGCCAAGAAGGCCCC GGCGGCCAAGAAGACGGCGT CGCGC AAGAAGGCTTCCTGACCGCC TTTTTTCCTTGCCTT Caul_1773 1874193 - 1875044 + | Ku protein Caul_1774 1875115 - 1876023 + | hypothetical protein Caul_1775 1877020 - 1876028 - | acyltransferase 3 TERM 1315 1876967 - 1877007 + g 70 -4.4 -4.4767 | overlap 1876967 CAGCACCCCCAGCGC CGCCACGGCCCGCAGGCC GTCCA GGGCGGCGAGGCGTTGTG TTTTCTCCTCCATCA TERM 1316 1877206 - 1877178 - R 71 -5.2 -4.51378 | opp_overlap 1877178 1877179 1877190, overlap 1877179 1877202 ACGGACAGTAGAAAA CCTCATCCTGAG CTTGT CGAAGGACGAGG TTTCGCCCCCGGAGC Caul_1776 1877663 - 1877238 - | PilT domain-containing protein Caul_1777 1877911 - 1877660 - | prevent-host-death family protein Caul_1778 1879821 - 1878025 - | glycoside hydrolase 15-related Caul_1779 1882133 - 1879971 - | Amylo-alpha-16-glucosidase TERM 1317 1882161 - 1882203 + r 91 -17.7 -3.14211 | gap 1, opp_overlap 1882167 1882168 TTGCGCTGAGGTCCC TCGAAAGCCCGCCGCGCCGC GGAT GCGGCG-GGCGGGTTCCCGA TTCCTAAAACCCGAT TERM 1318 1882193 - 1882167 - R 93 -17.2 -3.53444 | opp_overlap 1882161, overlap 1882168 TGAGGTCCCTCGAAA GCCCGCCGCGCC GCG GATGCGGCGGGC GGGTTCCCGATTCCT TERM 1319 1882196 - 1882168 - R 90 -19.6 -2.71924 | gap 1, opp_overlap 1882161, overlap 1882167 GAGGTCCCTCGAAAG CCCGCCGCGCCGC GGAT GCGGCG-GGCGGG TTCCCGATTCCTAAA Caul_1780 1883319 - 1882255 - | glycosyl transferase group 1 TERM 1320 1883497 - 1883528 + H 81 -10 -4.12188 | CATTTGAGGGCGCGC GGACTGGCCGCGCG CGAG TGTGCGGCGAGACC TTTTGACGGTGATCA TERM 1321 1885020 - 1884988 - g 74 -14.1 -3.29144 | CTATGGCTGGGATAA GGTGCTGGTGCAGCG TAT CGCCGCAGGAGCACC CAGCGCAGCTTGACC Caul_1781 1883531 - 1885033 + | peptidoglycan binding domain-containing protein Caul_1782 1885210 - 1885887 + | hypothetical protein Caul_1783 1885916 - 1886263 + | hypothetical protein TERM 1322 1886289 - 1886312 + T 100 -19.6 -3.70863 | opp_overlap 1886289 GAGGGGAATGAAAAA CGGCCCCGGA TGGC TCCGGGGCCG TTTCCATGGTCTCTG TERM 1323 1886312 - 1886289 - T 100 -19.6 -4.87291 | opp_overlap 1886289 GAGGGGAATGAAAAA CGGCCCCGGA TGGC TCCGGGGCCG TTTCCATGGTCTCTG Caul_1784 1887379 - 1886339 - | phosphate ABC transporter, periplasmic phosphate-binding protein PstS, putative Caul_1785 1887939 - 1887514 - | arsenate reductase Caul_1786 1889016 - 1887943 - | arsenical-resistance protein Caul_1787 1889683 - 1889144 - | protein tyrosine phosphatase Caul_1788 1890051 - 1889680 - | ArsR family transcriptional regulator Caul_1789 1890112 - 1890828 + | arsenical resistance protein ArsH TERM 1324 1892115 - 1892087 - g 73 -12.3 -3.41745 | opp_overlap 1892107 CTTCTACAACACCAA CGCCGCCCACGTC CTG GACGCTGGCGTCG GCGCGACCAAGCTGT Caul_1790 1891092 - 1893542 + | TonB-dependent receptor Caul_1791 1893621 - 1894919 + | major facilitator transporter Caul_1792 1894933 - 1895997 + | luciferase family protein Caul_1793 1896003 - 1896650 + | isochorismatase hydrolase TERM 1325 1897439 - 1897457 + G 78 -10.2 -4.14243 | CCCCCGACTACGCCA TCGCCGCC GAG GGCTGCGA TTTTGGCCTGACCTG Caul_1794 1896805 - 1898190 + | hypothetical protein Caul_1795 1898192 - 1898686 + | flavin reductase domain-containing protein Caul_1796 1898699 - 1899511 + | taurine dioxygenase TERM 1326 1899554 - 1899601 + F 80 -14.9 -3.19192 | gap 1, opp_overlap 1899541 AGCGCGTAGCGCGCC GATCCGGGACCGACCCG-AAGC GCCGA GTTCACGCGTCGGTCCCGGGTC TTCGCTTCGCTACGC Caul_1797 1899630 - 1900451 + | NAD-dependent epimerase/dehydratase TERM 1327 1900499 - 1900464 - T 100 -19 -3.88787 | overlap 1900465 TGACATCCCCACAAA CTCCGCTCATCCCGGC ATTC GCCGGGGTGAGCGGAT GAAATGTGGCCGCTA TERM 1328 1900498 - 1900465 - T 100 -22.5 -2.92951 | overlap 1900464 GACATCCCCACAAAC TCCGCTCATCCCGGC ATTC GCCGGGGTGAGCGGA TGAAATGTGGCCGCT Caul_1798 1900997 - 1900512 - | glyoxalase/bleomycin resistance protein/dioxygenase Caul_1799 1901945 - 1901124 - | short-chain dehydrogenase/reductase SDR Caul_1800 1902975 - 1902112 - | taurine catabolism dioxygenase TauD/TfdA TERM 1329 1903084 - 1903104 + H 74 -6.1 -4.39386 | TCCTGCAAAGTTCGC GATGCGC TGGCCTT GCGCGTC TTTTGCTCATTTCCG Caul_1801 1903246 - 1904451 + | Rieske (2Fe-2S) domain-containing protein TERM 1330 1904765 - 1904724 - g 76 -13.7 -3.53012 | gap 1 GCGGCGCGGGTGAAA GACCTGCTGGCCCCCCAGCC GGT GG-TGCTGGACCAGCAGGCC TGGGGCCTGGACCAC Caul_1802 1904448 - 1905245 + | extradiol ring-cleavage dioxygenase class III protein subunit B Caul_1803 1905260 - 1906336 + | acetamidase/formamidase Caul_1804 1906513 - 1907463 + | AraC family transcriptional regulator Caul_1805 1908758 - 1907601 - | aldose 1-epimerase TERM 1331 1908776 - 1908788 + r 71 -9.1 -3.78934 | opp_overlap 1908775 1908774 CTTCTTCCCAAAATC GCTCG CGC CGAGC TTGTTGTGGAAACCG Caul_1806 1909323 - 1909045 - | histone family protein DNA-binding protein TERM 1332 1910202 - 1910151 - g 77 -15.1 -3.15544 | gap 2 GGCGACGCCCACGAA CGCCACGCCGACGCGGTGGCCGACC GGGT GGCCAGCGGCCG-ATCGGCG-GGCG ACCTGCTGCAGCAAT Caul_1807 1909773 - 1910861 + | hypothetical protein TERM 1333 1911299 - 1911265 - g 85 -18 -3.19157 | overlap 1911266 1911292 CACCAACGGCATGAA CCAGCGGCATTTCCAT CGG ATGGAAAAGCCGCTGA TCAACGCGCTCGACG TERM 1334 1911298 - 1911266 - g 79 -19.3 -2.51173 | overlap 1911265 1911292 ACCAACGGCATGAAC CAGCGGCATTTCCAT CGG ATGGAAAAGCCGCTG ATCAACGCGCTCGAC TERM 1335 1911334 - 1911292 - g 73 -7.7 -4.1899 | overlap 1911266 1911265 CCATCGGATGGAAAA GCCGCTGATCAACG-CGCTCG ACG CGGGCGGCGA-GATCAACAGC TACAAGGTCTACGCC Caul_1808 1910858 - 1911535 + | hypothetical protein TERM 1336 1912777 - 1912797 + G 72 -13.3 -3.14344 | opp_overlap 1912777 GAGCTCTGGGAGCAA CTGGTCGAG ATC CTCGACCGG TTCGTCGACAACGTC Caul_1809 1911532 - 1913106 + | TPR repeat-containing protein Caul_1810 1916012 - 1913109 - | hypothetical protein TERM 1337 1913938 - 1913889 - G 70 -12.9 -3.28712 | gap 3, opp_overlap 1913928 GCGCTCGGCCGAGAA CGCCACCTGGGGC-GGCGAGC-CG GAGGG CGTGGTCGCCAGCCCCAGG-GCCG GGGTCTTGCCCGTGG TERM 1338 1915959 - 1915922 - G 72 -8.4 -4.08216 | CGATGGTCTGCAAAA TGTCGGTCAGGGCG CGAAGCGGGT CGCCCTGGCCGATA TCGGCCTGACGGAAC Caul_1811 1921243 - 1916009 - | kelch repeat-containing protein TERM 1339 1918034 - 1918015 - G 81 -10.6 -4.25104 | TGTCGGTCAGCAAAA CCGCGCCG TGGC CGGCCCGG GGCGCCAATAGGTCG TERM 1340 1918964 - 1918999 + g 71 -2.5 -4.58395 | gap 3, overlap 1918948 1918989 GGCCTGGGTCAGCTT GGCGCC--GGCC-TGCGG ACC CCGGACGGCCTCGGCCCC TTTTTCCGGGATCGG TERM 1341 1919408 - 1919395 - G 73 -8.1 -4.11216 | GCTCGATCTGGAAAA GCTGG GGCA CCAGC TGGCCCGCGAGCGCC TERM 1342 1919527 - 1919555 + g 100 -13.1 -4.82901 | opp_overlap 1919521 CGAAGACGACGGTCT GACCCAGGGCGGG CTT TTCGCCCTCGGTC TTTTTGTCCCAGGGG Caul_1812 1923564 - 1921243 - | hypothetical protein TERM 1343 1921924 - 1921878 - G 85 -18.7 -3.01712 | gap 2 CGGTGGCCGCGAACA GCCGGGCGGCGGCCGCCGACTCC GGC GGGGTCGGCG-CGGCCG-CCAGC GGATTGAGCACGGTG Caul_1813 1923929 - 1923561 - | hypothetical protein Caul_1814 1924536 - 1923937 - | hypothetical protein Caul_1815 1925706 - 1924552 - | hypothetical protein Caul_1816 1926113 - 1925709 - | hypothetical protein Caul_1817 1926770 - 1926117 - | putative signal peptide Caul_1818 1926979 - 1926767 - | hypothetical protein Caul_1819 1928964 - 1926976 - | ATPase central domain-containing protein TERM 1344 1928217 - 1928239 + g 72 -13.4 -3.18912 | opp_overlap 1928172 GCTGCCACAGCCGGC CGACGGCGAC CAC GTCGGCGTCG TTGATCAGTCGGTCG Caul_1820 1930190 - 1928961 - | hypothetical protein Caul_1821 1932040 - 1930187 - | hypothetical protein TERM 1345 1931871 - 1931860 - G 71 -2.2 -4.56597 | TTTCGGCTTCAAAAA CGAT TCGG ACCG GCGGGTGAGGTGGGG Caul_1822 1932765 - 1932037 - | hypothetical protein Caul_1823 1933295 - 1932780 - | phage tail protein Caul_1824 1935379 - 1933307 - | tail sheath protein Caul_1825 1935527 - 1936114 + | hypothetical protein Caul_1826 1936223 - 1936591 + | hypothetical protein TERM 1346 1936607 - 1936638 + F 70 -7.9 -4.07246 | gap 1, opp_overlap 1936595 1936594, overlap 1936632 AACTCGCGTCCGGTC GGC-GGCGCGTCCG CCGGC CGGGTTCGCCCGCC TTTGATTTCAGATCG Caul_1827 1936683 - 1937057 + | hypothetical protein Caul_1828 1937076 - 1937468 + | hypothetical protein Caul_1829 1937807 - 1937604 - | hypothetical protein TERM 1347 1937848 - 1937819 - R 82 -14.9 -3.34344 | overlap 1937820 CCATGGGCTAAGCAA CGCCCCCGGAGCG CGTC CGCTCCGGGGTCT CCAAGCTAAATCGAG TERM 1348 1937847 - 1937820 - R 86 -18.4 -2.60392 | overlap 1937819 CATGGGCTAAGCAAC GCCCCCGGAGCG CGTC CGCTCCGGGGTC TCCAAGCTAAATCGA Caul_1830 1937963 - 1937811 - | hypothetical protein Caul_1831 1939291 - 1938035 - | GDSL family lipase Caul_1832 1939481 - 1941907 + | glycoside hydrolase family 3 protein Caul_1833 1942031 - 1944892 + | hypothetical protein Caul_1834 1945725 - 1944973 - | GntR domain-containing protein Caul_1835 1947077 - 1945866 - | mandelate racemase/muconate lactonizing protein Caul_1836 1947274 - 1949403 + | Alpha-glucuronidase TERM 1349 1949478 - 1949516 + F 100 -11.7 -4.86621 | gap 1, opp_overlap 1949476 GCGAACGAATTGAGG CCGCCAGCGATCGATCCT CTCG GGGGCCG-TTGCTGGCGG TTTTTCGTTGCCCAT Caul_1837 1949672 - 1950436 + | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 1350 1950506 - 1950483 - T 100 -18.2 -5.42259 | overlap 1950501 TGACTCGCAAAAAAA GCGGCGTGTC CGAA GACACGCCGC TGGGGGAACGCGAGG Caul_1838 1953480 - 1950541 - | TonB-dependent receptor TERM 1351 1951029 - 1951054 + g 74 -11.8 -3.72324 | overlap 1951044 GTTGGCTGACCGTCA CCGTCGCGGC GCTGGG GCCGCCACGG TTATTGATGGCGGTC Caul_1839 1955404 - 1953899 - | tryptophan halogenase Caul_1840 1956933 - 1955413 - | tryptophan halogenase Caul_1841 1958375 - 1956930 - | tryptophan halogenase TERM 1352 1957789 - 1957757 - G 77 -15.6 -3.13403 | gap 1, overlap 1957755 TGGTGTCGATGAACA GGTCGGCC-GCGACG CGCT CGCCGCTGGCCAACC GCACGGTGTCGAGGC TERM 1353 1958326 - 1958353 + g 75 -10.4 -4.08216 | GCGGTCATCCAGCCG GCGACGCCGCCG CCCA CGATGGCGACGC TTTTCAAGGACCTGC Caul_1842 1959889 - 1958372 - | tryptophan halogenase TERM 1354 1960258 - 1960246 - g 81 -7.7 -4.56914 | GGAGGCAAACGAAAA TGGAC TAT GTCCA AGGCGCGTCCGCGCG Caul_1843 1960245 - 1963496 + | TonB-dependent receptor TERM 1355 1963509 - 1963536 + F 81 -15.6 -3.01924 | opp_overlap 1963507 1963505 TAGATTCCAAAGACG GCTCGGTCGGAC ACCC GTCCGGTCGAGC TGTTGAGGGCGCATA TERM 1356 1963643 - 1963607 - f 72 -7.7 -4.13767 | opp_overlap 1963610, overlap 1963608 GCTTCTACCCCAAAA CTTCGCCGCGCGGCGTC CCT GATGCCGCGCGGTGTTC TTGAAAGGTCATCGC TERM 1357 1963610 - 1963640 + F 100 -22.6 -3.62775 | opp_overlap 1963608 1963607 TCTACCCCAAAACTT CGCCGCGCGGCGTC CCT GATGCCGCGCGGTG TTCTTGAAAGGTCAT Caul_1844 1963661 - 1964821 + | glycoside hydrolase family protein Caul_1845 1965111 - 1966115 + | transcription factor jumonji domain-containing protein Caul_1846 1966205 - 1967140 + | polysaccharide deacetylase TERM 1358 1968206 - 1968260 + G 100 -13.5 -4.62069 | opp_overlap 1968224 CGATCCCGCCGCCCC GGCCAGCGCCGCCGACAAGCC-GCTGA TGA TCGGCTGGCTTGACAGCGAAGC-GGCC TTTTTCGCCTGGACG Caul_1847 1967178 - 1968848 + | carboxylesterase type B Caul_1848 1968987 - 1969367 + | putative transposase of insertion sequence ISRm2011-2, orfA protein Caul_1849 1969429 - 1969932 + | transposase and inactivated derivatives-like protein TERM 1359 1970108 - 1970072 - f 100 -13 -5.05782 | gap 1, overlap 1970073 ATCGACGCTAAAAAA GGCG-GGGACCGTCATC TCAG GATGGCGGTCCCGCGCA GGCTGTACGGGCGGA TERM 1360 1970107 - 1970073 - f 91 -16.5 -3.62746 | gap 1, overlap 1970072 TCGACGCTAAAAAAG GCG-GGGACCGTCATC TCAG GATGGCGGTCCCGCGC AGGCTGTACGGGCGG TERM 1361 1970320 - 1970307 - f 74 -5.2 -4.56597 | opp_overlap 1970299 1970310, overlap 1970309 CGTTTGCGTCAAAAA GGCG GCGGTT CGCC TATCTGGCTTGGGTT TERM 1362 1970659 - 1970643 - g 71 -10.1 -3.77588 | AGCTCAGACGAACAA CGACAGC CAG GCCGTCG AGGAGGTTGTCGTCA TERM 1363 1973399 - 1973385 - g 70 -8.5 -3.8512 | GATCTACGAGAAGAA CGGGC TCTCG GCCCG CGTGGCCTACAACTG Caul_1850 1970548 - 1973655 + | TonB-dependent receptor TERM 1364 1973701 - 1973730 + F 89 -16.5 -3.50393 | overlap 1973705 CTCGACCTAGGTCGG GGAAGGGTCGCTG TTCG CAGCGGCCCTTTC TTCTCTACAGTAGCC TERM 1365 1973705 - 1973726 + F 100 -13.7 -4.39329 | overlap 1973701 ACCTAGGTCGGGGAA GGGTCGCTG TTCG CAGCGGCCC TTTCTTCTCTACAGT Caul_1851 1973803 - 1974531 + | SapC family protein Caul_1852 1974569 - 1975600 + | transcription factor jumonji domain-containing protein TERM 1366 1976795 - 1976809 + G 73 -7.1 -4.17023 | TATAAACTGACCGAG CGGAC CGACA GTCCG TTTTGGGATCGTTGC Caul_1853 1975622 - 1977115 + | tryptophan halogenase TERM 1367 1977647 - 1977670 + G 76 -3 -4.7497 | gap 1, overlap 1977647 1977648 CTGACCAGGCCGGTT G-GCGCGGCGA TCA TCGCGGCGGGC TTTTTGATGGATGAG Caul_1854 1977137 - 1977760 + | methyltransferase type 11 Caul_1855 1978242 - 1980419 + | sulfotransferase Caul_1856 1980503 - 1981585 + | hypothetical protein TERM 1368 1990218 - 1990202 - g 71 -10.8 -3.54543 | opp_overlap 1990188 1990187 ACCGATCCCGCTAAA CGCCGC GCTTG GCGGCG TCGCATTCTCGAGCA Caul_1857 1981842 - 1990388 + | outer membrane autotransporter Caul_1858 1991581 - 1990553 - | hypothetical protein TERM 1369 1991643 - 1991608 - R 100 -20.4 -4.54727 | overlap 1991609 1991610 TCGCGGAAAGGAAAA GGCGGATCGGCGCGCG CGGA CGCGCGCCGATCCGTG AGGTGAGGGCGGCCG TERM 1370 1991642 - 1991609 - R 100 -23.9 -3.32354 | overlap 1991608 1991610 CGCGGAAAGGAAAAG GCGGATCGGCGCGCG CGGA CGCGCGCCGATCCGT GAGGTGAGGGCGGCC TERM 1371 1991641 - 1991610 - R 100 -27.4 -2.5893 | overlap 1991609 1991608 GCGGAAAGGAAAAGG CGGATCGGCGCGCG CGGA CGCGCGCCGATCCG TGAGGTGAGGGCGGC TERM 1372 1991650 - 1991673 + r 71 -10.9 -3.53091 | CGATCCGTGAGGTGA GGGCGGCCG ATGCGG CGACCGCCC TTTCGGGGGAGAGGT Caul_1859 1994354 - 1991688 - | TonB-dependent receptor Caul_1860 1995480 - 1994482 - | anti-FecI sigma factor, FecR Caul_1861 1996063 - 1995470 - | ECF subfamily RNA polymerase sigma-24 factor Caul_1862 1998894 - 1996051 - | TonB-dependent receptor plug Caul_1863 1999170 - 1998943 - | hypothetical protein Caul_1864 1999892 - 1999614 - | hypothetical protein Caul_1865 2000015 - 2001736 + | TonB-dependent receptor TERM 1373 2001752 - 2001787 + F 100 -12.4 -5.42259 | gap 1, overlap 2001754 TCTAGCTTCATCCCC CTGCGGCCCGCCC-CTC CCT GCGTGGGCGGGCCGCTC TTTTTTTCAAGGTGG TERM 1374 2001754 - 2001785 + F 100 -19.4 -4.35085 | gap 1, overlap 2001752 TAGCTTCATCCCCCT GCGGCCCGCCC-CTC CCT GCGTGGGCGGGCCGC TCTTTTTTTCAAGGT Caul_1866 2001808 - 2003313 + | tryptophan halogenase Caul_1867 2004152 - 2003574 - | hypothetical protein Caul_1868 2004313 - 2004792 + | AsnC family transcriptional regulator Caul_1869 2005360 - 2004890 - | AsnC family transcriptional regulator Caul_1870 2005527 - 2006756 + | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) Caul_1871 2006761 - 2007774 + | transketolase central region Caul_1872 2007778 - 2009052 + | dehydrogenase catalytic domain-containing protein Caul_1873 2009057 - 2010460 + | dihydrolipoamide dehydrogenase Caul_1874 2010478 - 2011641 + | acyl-CoA dehydrogenase domain-containing protein Caul_1875 2011638 - 2013254 + | propionyl-CoA carboxylase Caul_1876 2013260 - 2015125 + | carbamoyl-phosphate synthase L chain ATP-binding Caul_1877 2015125 - 2015574 + | dehydratase Caul_1878 2015571 - 2016410 + | HpcH/HpaI aldolase TERM 1375 2016964 - 2016950 - g 79 -11.4 -3.97368 | opp_overlap 2016952 TGCGGAAGTCATAAA GGCCTG GTT CAGGCC CGGGTTTCGCCTGGC Caul_1879 2016543 - 2017751 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Caul_1880 2017861 - 2018700 + | hypothetical protein Caul_1881 2019196 - 2018744 - | thioesterase superfamily protein Caul_1882 2019360 - 2020184 + | IclR family transcriptional regulator Caul_1883 2020612 - 2020199 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1376 2020546 - 2020489 - G 82 -17 -2.98823 | overlap 2020487 GGCCGCCGACATAGA GCCAGGCGC-CCCCGACGCCGAAGTCCG GCCG CGGAC-CCGGCGTGAGGCCGAGCCTGGC GTAGAAGTCGAGCGT TERM 1377 2021203 - 2021227 + G 77 -14.9 -3.15861 | overlap 2021209 CTGGCATGTCCATGA CTGGGCCGGCG CGG CGCCGGGCCGG TTCATCCCGCTGATG Caul_1884 2020784 - 2022118 + | amidohydrolase 2 TERM 1378 2022171 - 2022132 - T 84 -16.4 -3.07236 | opp_overlap 2022135 2022138, overlap 2022121 2022120 2022156 AAATCGACCCGAAGA TCGCAACGCCTGCCGGGT CAAA ACCCGGCGGGCGTTGTCA TGTCCGCTGGCCTCG TERM 1379 2022135 - 2022168 + T 100 -24.7 -2.63596 | opp_overlap 2022120 2022132 2022156, overlap 2022138 TCGACCCGAAGATCG CAACGCCTGCCGGGT CAAA ACCCGGCGGGCGTTG TCATGTCCGCTGGCC TERM 1380 2022138 - 2022165 + T 100 -20.6 -3.47078 | opp_overlap 2022120 2022132 2022156, overlap 2022135 ACCCGAAGATCGCAA CGCCTGCCGGGT CAAA ACCCGGCGGGCG TTGTCATGTCCGCTG Caul_1885 2023233 - 2022169 - | aminoglycoside phosphotransferase Caul_1886 2024528 - 2023230 - | acyl-CoA dehydrogenase domain-containing protein Caul_1887 2025284 - 2024553 - | short-chain dehydrogenase/reductase SDR Caul_1888 2025351 - 2025965 + | TetR family transcriptional regulator TERM 1381 2026698 - 2026659 - g 74 -12.8 -3.61398 | opp_overlap 2026631 GTTCTTCGGCAAGAA CAGCCCGGCCGGAGTGAT CTCG ATCACCACGGCCGACCCG ACCTCGACGTTCGAA TERM 1382 2026872 - 2026848 - g 79 -14.9 -3.28712 | overlap 2026850 CGGTTGGCGCGACAA CACCGCCGACG CGG CGGCGGCGGCG GCAAATGCGATCCGG TERM 1383 2026873 - 2026850 - g 77 -15.2 -3.21276 | overlap 2026848 GTTGGCGCGACAACA CCGCCGACGC GGCG GCGGCGGCGG CAAATGCGATCCGGC Caul_1889 2026183 - 2028636 + | TonB-dependent receptor TERM 1384 2028658 - 2028697 + F 100 -20 -5.00616 | gap 1, overlap 2028659 2028662 GCGCTGCTTGAGTTG AGACCGCCGC-GTCCGGCC CGA GGCCGGACCGCGGCGATCG TTTTTTGAACCGGCC TERM 1385 2028659 - 2028696 + F 100 -23.5 -3.60048 | gap 1, overlap 2028658 2028662 CGCTGCTTGAGTTGA GACCGCCGC-GTCCGGCC CGA GGCCGGACCGCGGCGATC GTTTTTTGAACCGGC TERM 1386 2028662 - 2028693 + F 100 -23.8 -2.62111 | gap 1, overlap 2028659 2028658 TGCTTGAGTTGAGAC CGCCGC-GTCCGGCC CGA GGCCGGACCGCGGCG ATCGTTTTTTGAACC Caul_1890 2028742 - 2029725 + | fumarylacetoacetate (FAA) hydrolase Caul_1891 2030501 - 2029722 - | short-chain dehydrogenase/reductase SDR Caul_1892 2031658 - 2030522 - | acyl-CoA dehydrogenase domain-containing protein TERM 1387 2030555 - 2030612 + g 70 -15.5 -2.76468 | gap 1, overlap 2030602 GATTTCCTTCATGAT C-TCGGAGGTGCCGGCGTAGATGCGGGC GAC GCGCGCATCGACCCAGGCGCGTCCGACG TCGTATTCGCTCATA Caul_1893 2032465 - 2031665 - | enoyl-CoA hydratase Caul_1894 2033478 - 2032465 - | acyl-CoA dehydrogenase domain-containing protein TERM 1388 2032783 - 2032753 - G 72 -13.8 -3.21099 | overlap 2032726 CGCCGCCATCAGGAA GGCGGCCTCCGACG CGG CGACGGCCGCCGCC GCCTGCGTGGCCAGA Caul_1895 2034629 - 2033478 - | acyl-CoA dehydrogenase domain-containing protein TERM 1389 2035077 - 2035063 - g 78 -12.8 -3.74747 | GCAAGGTCGACGAAA CGGCCG CCG CGGCCG CGCTGGCGGGGCTAA Caul_1896 2034885 - 2035775 + | 3-hydroxybutyryl-CoA dehydrogenase Caul_1897 2035772 - 2036959 + | acetyl-CoA acetyltransferase Caul_1898 2037051 - 2037719 + | short-chain dehydrogenase/reductase SDR Caul_1899 2038706 - 2037732 - | hypothetical protein Caul_1900 2039224 - 2038703 - | carboxymuconolactone decarboxylase Caul_1901 2040195 - 2039227 - | hypothetical protein TERM 1390 2039951 - 2039933 - G 73 -7.4 -4.1196 | AACGGACCTTGAAAA TCCTCCAG GCT CTTGAGGA ACCCCGGGAACATCG Caul_1902 2041435 - 2040245 - | hypothetical protein TERM 1391 2041082 - 2041100 + g 78 -6.7 -4.59773 | gap 1 GCTGGACTCGGTGAT CGTGC-GG AAGA CCAGCACG TTTTTCGCCATGCCC Caul_1903 2041833 - 2041435 - | hypothetical protein Caul_1904 2042663 - 2041869 - | enoyl-CoA hydratase/isomerase Caul_1905 2044014 - 2042734 - | major facilitator transporter TERM 1392 2044411 - 2044425 + G 83 -12.8 -4.07568 | opp_overlap 2044405 2044404 GACAAATACCAGCTG CGGCCG CCC CGGCCG TTTTCGCCCGGCAGC Caul_1906 2044252 - 2045274 + | alcohol dehydrogenase Caul_1907 2045486 - 2047117 + | AMP-dependent synthetase and ligase Caul_1908 2047294 - 2049561 + | TonB-dependent receptor plug Caul_1909 2049666 - 2050547 + | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase Caul_1910 2051323 - 2050550 - | short-chain dehydrogenase/reductase SDR Caul_1911 2051569 - 2054022 + | TonB-dependent receptor TERM 1393 2054084 - 2054053 - T 100 -17.2 -4.07885 | opp_overlap 2054055, overlap 2054054 TACCTCGGTCTAAAA CTGGCCGCCGACCG TCAC CGGTCGGCGGCCTT TTCTTGCGCCGAGCG TERM 1394 2054083 - 2054054 - T 93 -20.7 -3.04517 | opp_overlap 2054055, overlap 2054053 ACCTCGGTCTAAAAC TGGCCGCCGACCG TCAC CGGTCGGCGGCCT TTTCTTGCGCCGAGC TERM 1395 2054055 - 2054082 + T 100 -24.2 -4.63218 | opp_overlap 2054054 2054053 CCTCGGTCTAAAACT GGCCGCCGACCG TCAC CGGTCGGCGGCC TTTTCTTGCGCCGAG TERM 1396 2054134 - 2054156 + T 100 -19.2 -4.11216 | opp_overlap 2054134 GGCGGACGGGAAAAA GGCCTCCGTC GGT GACGGAGGCC TTTTCCAAATCAGCG TERM 1397 2054156 - 2054134 - T 100 -19.2 -4.62069 | opp_overlap 2054134 GGCGGACGGGAAAAA GGCCTCCGTC GGT GACGGAGGCC TTTTCCAAATCAGCG Caul_1912 2055486 - 2054206 - | cytochrome P450 Caul_1913 2055989 - 2055591 - | limonene-12-epoxide hydrolase Caul_1914 2056109 - 2056657 + | glutathione peroxidase Caul_1915 2057631 - 2056705 - | alcohol dehydrogenase TERM 1398 2057703 - 2057665 - R 91 -18.9 -3.01416 | gap 1 TATCACTGAGACATA GGTCGGCCG-CGACCCGG CGGA CCGGGCCGACAACCGACC TGATGGAGCGTCAAT Caul_1916 2058300 - 2057719 - | aromatic-ring-hydroxylating dioxygenase beta subunit Caul_1917 2059708 - 2058332 - | Rieske (2Fe-2S) domain-containing protein TERM 1399 2059256 - 2059280 + g 79 -7.2 -4.4078 | gap 2 GCCGCCGTAGAGATG GCTGCGCGCCTG GGT CAGGC-CG-AGC TTTTCCTTGGGCAAA Caul_1918 2059858 - 2060076 + | hypothetical protein Caul_1919 2060073 - 2061458 + | major facilitator transporter Caul_1920 2061455 - 2062213 + | short-chain dehydrogenase/reductase SDR TERM 1400 2062638 - 2062654 + G 71 -11.5 -3.56643 | opp_overlap 2062613 2062612 ACTCGTTCGTGCCCG GCCGTCG CCA CGGCGGC TTTAACACCTATGGC Caul_1921 2062241 - 2063155 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_1922 2063155 - 2063967 + | short-chain dehydrogenase/reductase SDR Caul_1923 2063991 - 2064818 + | short-chain dehydrogenase/reductase SDR TERM 1401 2064807 - 2064797 - f 73 -8.2 -3.9712 | CGACGGCATGAGAAA GGCC CCT GGCC AATGGAGCTGAGTGG TERM 1402 2064842 - 2064828 - g 71 -2.8 -4.62336 | overlap 2064830 AGCTGAGTGGAAAAA CCGT CGTCCTC ACGG GCGCCTCGGCGGGGA Caul_1924 2064809 - 2065522 + | short-chain dehydrogenase/reductase SDR Caul_1925 2066385 - 2065519 - | short-chain dehydrogenase/reductase SDR Caul_1926 2066549 - 2067223 + | TetR family transcriptional regulator Caul_1927 2068077 - 2067232 - | fumarylacetoacetate (FAA) hydrolase Caul_1928 2068542 - 2068099 - | hypothetical protein Caul_1929 2069690 - 2068614 - | amidohydrolase 2 Caul_1930 2069979 - 2071334 + | major facilitator transporter Caul_1931 2072384 - 2071356 - | amidohydrolase 2 Caul_1932 2072491 - 2073708 + | major facilitator transporter TERM 1403 2074059 - 2074082 + G 83 -4.6 -4.91109 | gap 1 GCCTGGGACCGCGTG CTGCGCAT-CA ATC TGTATTCGCAG TTTTTCTGGTCCAAG Caul_1933 2073738 - 2074505 + | short-chain dehydrogenase/reductase SDR Caul_1934 2074633 - 2075121 + | UspA domain-containing protein Caul_1935 2076674 - 2075109 - | FAD dependent oxidoreductase TERM 1404 2075570 - 2075538 - G 79 -14.7 -3.39327 | overlap 2075540 2075555 CGGCGACAGGGAGAA GACCGGCGCCGACGG AAC CTGTCCGCGCCGGGC ATGGACCAGCGCCTG TERM 1405 2075568 - 2075540 - G 82 -15.9 -3.26722 | overlap 2075538 2075555 GCGACAGGGAGAAGA CCGGCGCCGACGG AAC CTGTCCGCGCCGG GCATGGACCAGCGCC Caul_1936 2077027 - 2076671 - | hypothetical protein Caul_1937 2078058 - 2077024 - | hypothetical protein Caul_1938 2079434 - 2078103 - | major facilitator transporter Caul_1939 2080234 - 2079434 - | short-chain dehydrogenase/reductase SDR Caul_1940 2081090 - 2080263 - | short-chain dehydrogenase/reductase SDR TERM 1406 2081161 - 2081130 - R 100 -17.2 -5.00616 | overlap 2081131 2081132 CCGTCTTTCAAAAAA GCCCGCCCCCGACG AGAT CGTCGGGGGCGGTA GGCGGGGTGGTTGGA TERM 1407 2081160 - 2081131 - R 100 -20.7 -3.60048 | overlap 2081130 2081132 CGTCTTTCAAAAAAG CCCGCCCCCGACG AGAT CGTCGGGGGCGGT AGGCGGGGTGGTTGG TERM 1408 2081159 - 2081132 - R 100 -24.2 -2.75708 | overlap 2081131 2081130 GTCTTTCAAAAAAGC CCGCCCCCGACG AGAT CGTCGGGGGCGG TAGGCGGGGTGGTTG Caul_1941 2083208 - 2081178 - | TonB-dependent receptor TERM 1409 2081315 - 2081337 + g 83 -14.8 -3.65224 | TGACGTAGACGCCCA GGTCGACGGC GCT GCCGCCGACC TTCTTCCAGTCCAGT Caul_1942 2083752 - 2083438 - | carbonate dehydratase Caul_1943 2084643 - 2083783 - | integrase catalytic region TERM 1410 2084650 - 2084672 + r 91 -3.3 -5.45726 | gap 1 GAACTTCATCGGGAG GCCGCTC-CG AAGA TGAGCGCGGC TTTTTTTAAGATGTC Caul_1944 2084954 - 2084640 - | transposase IS3/IS911 family protein Caul_1945 2086042 - 2085365 - | TetR family transcriptional regulator Caul_1946 2086196 - 2086924 + | acetoacetyl-CoA reductase Caul_1947 2087011 - 2087433 + | hypothetical protein TERM 1411 2087473 - 2087505 + G 75 -8.4 -4.18908 | gap 2, overlap 2087473 TGATTAAATTCGCAT CCG-G-CGGCGCTCTG GAC CAGGGCGGCGGCGCGG TTCTTTTCGCCGTGT TERM 1412 2088354 - 2088398 + G 100 -20.8 -5.20216 | opp_overlap 2088379 ATCGCCGCCGAGCAC CGCC-TGCGGGCGGCCGGCG CCAATAT CGCCG-CCGCCCGCGCGGCG TTTTTTCCTAATATC Caul_1948 2087433 - 2088920 + | RND efflux system outer membrane lipoprotein Caul_1949 2088917 - 2089987 + | secretion protein HlyD family protein TERM 1413 2091583 - 2091624 + G 100 -28.1 -3.78775 | gap 1 CCCCCCAGCGACACG GTCGCTCAGCC-GCCGCGCC CGG GGCGCGGCTGGCTGGGCGGC TTTAGTCCTCGGCGG TERM 1414 2092583 - 2092610 + G 72 -4.8 -4.39426 | overlap 2092571 2092578 2092586 2092587 AGGGAGCCGGGGCGG TCATTGGTCGCG TCTT CCCGACCAGTCA TTTTGTCACCATCTG Caul_1950 2089984 - 2092749 + | ABC transporter related TERM 1415 2093797 - 2093818 + G 75 -8.7 -4.11183 | gap 1 GCCGCAGTTTCTGGC CATCGCGGCC ATT GGC-GCGGTG TTCTTTGTCGTGGCC Caul_1951 2092751 - 2093872 + | ABC-2 type transporter TERM 1416 2093891 - 2093917 + F 71 -10.7 -3.40175 | opp_overlap 2093892, overlap 2093889 2093890 2093892 GGGATGGGCCAGTCA AGGCGGGGCGC GATCG GCGCGCCGCCC TCTATTTTCCGCCGT TERM 1417 2093892 - 2093916 + F 74 -14.2 -2.63623 | opp_overlap 2093892, overlap 2093891 2093889 2093890 GGATGGGCCAGTCAA GGCGGGGCGC GATCG GCGCGCCGCC CTCTATTTTCCGCCG TERM 1418 2093916 - 2093892 - f 78 -14.2 -3.05816 | opp_overlap 2093892 2093891 2093889 2093890 GGATGGGCCAGTCAA GGCGGGGCGC GATCG GCGCGCCGCC CTCTATTTTCCGCCG Caul_1952 2093970 - 2094410 + | hypothetical protein TERM 1419 2094456 - 2094420 - T 72 -13.5 -2.73364 | opp_overlap 2094416 2094415 2094433 CGCTGAGCTCAAGGA CGCGCCCGTGACGGCCC AAG GGGGCTTTGCGGGCGCG CCAAATTTTCAAGCG Caul_1953 2095652 - 2094465 - | acetyl-CoA acetyltransferase Caul_1954 2096987 - 2095785 - | acetate kinase Caul_1955 2098407 - 2096989 - | bifunctional enoyl-CoA hydratase/phosphate acetyltransferase TERM 1420 2097230 - 2097244 + g 79 -7.1 -4.4078 | opp_overlap 2097207 GCCCGCCCGGCGACC GGGGA GACGA TCCCC TTTTCCTTGGCGGCC Caul_1956 2100171 - 2098411 - | poly-beta-hydroxybutyrate polymerase domain-containing protein TERM 1421 2100237 - 2100265 + H 74 -9.6 -3.92373 | gap 1 CCCATCCTTGCAGCC GTTGAGGACGACC CGGC GG-CGCCCTCAAC TTTCTAGCTGACGTC Caul_1957 2100430 - 2101494 + | hypothetical protein Caul_1958 2102352 - 2101597 - | short-chain dehydrogenase/reductase SDR TERM 1422 2102369 - 2102409 + r 86 -18.4 -2.52464 | gap 1 ATTGATCTCCTTGAT C-ATCCGCGCGATCGAGGC TCAA GCTCCGATCGCGCGGATAG TCCCTTGCAACCCCG Caul_1959 2102985 - 2102428 - | hypothetical protein Caul_1960 2103486 - 2103025 - | hypothetical protein Caul_1961 2104467 - 2103871 - | ECF subfamily RNA polymerase sigma-24 factor Caul_1962 2105871 - 2104660 - | patatin TERM 1423 2105891 - 2105923 + r 76 -13.5 -3.12351 | TAACCTCTTGGCAAT GGCGTTGGAGGCAAT CTG ATTGTCGCCAACGTC TTGGATGTGACGAGG Caul_1963 2106766 - 2106128 - | hypothetical protein Caul_1964 2107263 - 2106907 - | hypothetical protein Caul_1965 2108019 - 2107744 - | hypothetical protein Caul_1967 2111319 - 2108530 - | TonB-dependent receptor plug Caul_1966 2108034 - 2108615 + | hypothetical protein Caul_1968 2112356 - 2111346 - | anti-FecI sigma factor, FecR Caul_1969 2112923 - 2112360 - | ECF subfamily RNA polymerase sigma-24 factor Caul_1970 2113133 - 2116063 + | TonB-dependent receptor Caul_1971 2116125 - 2117072 + | glycerophosphoryl diester phosphodiesterase TERM 1424 2117106 - 2117077 - f 100 -19.3 -4.46212 | overlap 2117079 TCGGTCACTAGAAAA GGTGAGGGCCGGC GAAA GCCGGCCCTCAGC GCATCATCATGAAAT TERM 1425 2117104 - 2117079 - f 91 -20.5 -2.56122 | overlap 2117077 GGTCACTAGAAAAGG TGAGGGCCGGC GAAA GCCGGCCCTCA GCGCATCATCATGAA Caul_1972 2117115 - 2117831 + | phosphoglycerate mutase TERM 1426 2117949 - 2118007 + F 78 -6.6 -4.57073 | gap 1, overlap 2117950 GGCGGGGGTCTTGAG TCCGCTGATGGCTTCACCGCAGGCTCG CGCCGT CTGGCCTG-GCTGCGACCGTCAGCGGG TTTTTACACAGCCTC TERM 1427 2118823 - 2118853 + F 76 -10.5 -3.87815 | gap 1, opp_overlap 2118840 CGAAGCCGCCATGTC GCCG-TCCGGGA ATGAAGGA TCCCGGATCGGC TTTCTGGCCATAGAA TERM 1428 2120320 - 2120351 + G 70 -4.4 -4.42806 | gap 1, overlap 2120334 GACGACCATCTTCGC TTGATGGCCTGGCGG CCG CC-TCAGGTCGGCAA TTTCTTTCCCAATGG TERM 1429 2120688 - 2120660 - g 70 -14.5 -2.78463 | opp_overlap 2120658 2120668, overlap 2120646 2120643 2120641 AGGCCCTCTACGAGA CGGGCCGGCCC GCCAACT GGCCCGGCCCG GGTCATGTCGGTGAA Caul_1974 2119372 - 2120775 + | Rieske (2Fe-2S) domain-containing protein Caul_1975 2120818 - 2121387 + | aromatic-ring-hydroxylating dioxygenase beta subunit Caul_1976 2121410 - 2122723 + | amidohydrolase 2 Caul_1977 2123001 - 2124605 + | histidine kinase Caul_1978 2125051 - 2126298 + | hypothetical protein TERM 1430 2126764 - 2126798 + G 72 -8.4 -4.08394 | overlap 2126766 GGTTGAATTTGTCCA GAGCGACGCCCAGACC GCC GATCTGGGCGAGGCTG TTTTCGACGCGGTGT TERM 1431 2126766 - 2126796 + G 71 -11 -3.63922 | overlap 2126764 TTGAATTTGTCCAGA GCGACGCCCAGACC GCC GATCTGGGCGAGGC TGTTTTCGACGCGGT Caul_1979 2126588 - 2127310 + | methyltransferase type 11 Caul_1980 2127800 - 2127528 - | hypothetical protein TERM 1432 2128396 - 2128411 + G 70 -8.2 -3.8822 | CCACGGCGATGTTCT GGCCGG CCCG TCGGCC TTTCGCTTTCATGTA TERM 1433 2128676 - 2128729 + G 81 -12.4 -3.83026 | opp_overlap 2128702 ATGCGCATGCGCGTC CAGCGTCTGGT-GCGGGCGGCCGAAC AGGC GGT-GGCCGGCGGCTACCGGGCGCTG TTTGGTCTGCGCCGG Caul_1981 2127986 - 2128807 + | hypothetical protein Caul_1982 2129847 - 2129368 - | helix-turn-helix domain-containing protein TERM 1434 2129945 - 2129931 - H 82 -5.6 -4.82901 | opp_overlap 2129930 GTGTCGTTAGAAAAA GTACCC GTT GGGGAC CGTTTCGCGCGCGGC TERM 1435 2129950 - 2129990 + H 76 -10.2 -3.92542 | overlap 2129955 2129958 CCGTTGGGGACCGTT TCGCGCGCGGCGCGGCGG GGGTG TCGCCTCACGGCGCGCCA TTGTTTGGGAATGGC Caul_1983 2130182 - 2130841 + | GntR family transcriptional regulator Caul_1984 2130910 - 2131029 + | hypothetical protein TERM 1436 2131072 - 2131093 + F 78 -12.3 -3.78953 | overlap 2131064 GGCCGCGGGTTCGCC GTCGCCGAC CTCT GTTGGCGAC TTTCATCATCGCGGT TERM 1437 2131273 - 2131306 + F 79 -13.7 -3.53091 | overlap 2131275 CTGGCCCTAAGGGCC GAGCCCGTCGCCGGT CCGC GCCGGCGGCGGGGCC TTTGCCGGAGCAGAT TERM 1438 2131275 - 2131305 + F 75 -14.7 -2.71712 | gap 1, overlap 2131273 GGCCCTAAGGGCCGA GC-CCGTCGCCGGT CCGC GCCGGCGGCGGGGC CTTTGCCGGAGCAGA Caul_1985 2131323 - 2131961 + | hypothetical protein Caul_1986 2131961 - 2133712 + | asparagine synthase Caul_1987 2136148 - 2133707 - | peptidase S9 prolyl oligopeptidase TERM 1439 2136211 - 2136177 - R 81 -9.8 -4.2237 | overlap 2136178 AAATGAAGGTGAAAA GGCGGGCCGGACCCGG CTA CCAGGTCCGGGTCAGC TGCAGCGTCACGACG Caul_1988 2139255 - 2136193 - | TonB-dependent receptor Caul_1989 2140512 - 2139478 - | anti-FecI sigma factor, FecR Caul_1990 2141062 - 2140526 - | ECF subfamily RNA polymerase sigma-24 factor Caul_1991 2141204 - 2141413 + | XRE family transcriptional regulator Caul_1992 2141505 - 2141729 + | XRE family transcriptional regulator TERM 1440 2141774 - 2141717 - T 70 -12.5 -2.84325 | gap 1 CCGTCGGAAAGACCA GCAGGCAGGGTAGGGCG-TCTCGCGCGC TGC GCGCGCGACCGCGCTCTACGGCGCCGGC CGCGGCAAGCCGCGC Caul_1993 2143010 - 2142090 - | hypothetical protein Caul_1994 2143518 - 2143015 - | XRE family transcriptional regulator TERM 1441 2143449 - 2143437 - G 95 -6.2 -5.46706 | opp_overlap 2143437 ACTCGAAAAGAAAAA GCGG CGGCC CCGC TTCGATGTCGATGTC Caul_1995 2144163 - 2143531 - | hypothetical protein Caul_1996 2144382 - 2144167 - | transcriptional regulator Caul_1997 2144538 - 2144957 + | hypothetical protein Caul_1998 2144957 - 2145361 + | hypothetical protein Caul_1999 2145364 - 2146776 + | UBA/THIF-type NAD/FAD binding protein Caul_2000 2146773 - 2147132 + | hypothetical protein Caul_2002 2149113 - 2148253 - | integrase catalytic region Caul_2001 2147215 - 2148318 + | thymidylate synthase TERM 1442 2149120 - 2149142 + Tr 91 -3.3 -5.45726 | gap 1 GAACTTCATCGGGAG GCCGCTC-CG AAGA TGAGCGCGGC TTTTTTTAAGATGTC Caul_2003 2149424 - 2149110 - | transposase IS3/IS911 family protein Caul_2004 2150082 - 2149372 - | methyltransferase type 11 TERM 1443 2150209 - 2150231 + H 91 -15.6 -3.91488 | opp_overlap 2150206 CCGATGACCTAAGCG GTCATCGCGC TTC GCGCGATGGC TTCTTTGAAGGCCTT Caul_2005 2150449 - 2151225 + | hypothetical protein TERM 1444 2151658 - 2151642 - g 70 -9.3 -3.9122 | opp_overlap 2151639 TATCTCGCCAAACAA CGCGGCC TCA GTCCGCG CAGTATTCCGCACTC Caul_2006 2151285 - 2152496 + | integrase family protein TERM 1445 2153061 - 2153099 + G 77 -15.4 -3.13403 | gap 1, opp_overlap 2153049, overlap 2153059 TGATCGACTATCGTG TCGAGCGTGACCGGCTG ATCGGC CATCCGGTCACGC-CGA TGTTCGTCACCGACA Caul_2007 2152493 - 2153434 + | integrase family protein TERM 1446 2153452 - 2153466 + G 71 -11.4 -3.62597 | opp_overlap 2153435 GCCGCCGCCTTGCCC GCGCTG ATC CAGCGC TTCTTCACCGATCGG Caul_2008 2153431 - 2154423 + | integrase family protein Caul_2009 2154426 - 2154869 + | antirestriction protein-like protein Caul_2010 2154866 - 2155240 + | hypothetical protein TERM 1447 2155294 - 2155263 - f 85 -14.4 -3.57144 | gap 1, overlap 2155264 CTTCCGATCCTGAAA TTCCGCGCGCCGGGG AAA CCCCGACGC-CGGAT GACCGCGCCAATCCC TERM 1448 2155293 - 2155264 - f 86 -17.9 -2.74144 | gap 1, overlap 2155263 TTCCGATCCTGAAAT TCCGCGCGCCGGGG AAA CCCCGACGC-CGGA TGACCGCGCCAATCC TERM 1449 2156389 - 2156334 - g 70 -12.4 -3.34895 | overlap 2156335 TTGACCGCCAAGGAA GCCCGGCGCGCCCAGGCCGC-CGCCG TCAAGG CGGCGCGCGGCGAGGGCG-GCGACGC CGATCCGAAGACGGA Caul_2011 2155392 - 2157218 + | nuclease TERM 1450 2157243 - 2157268 + T 100 -18.3 -4.56597 | CCCGGCTTGAACCTT GCCCCTGGGTC TTGC GGCCCAGGGGC TTTTTCGCGGCGAGG Caul_2012 2157736 - 2157386 - | hypothetical protein TERM 1451 2157885 - 2157871 - H 77 -2.7 -5.00616 | opp_overlap 2157872, overlap 2157872 CTTCGCTCCAAAAAA GCCCG TCGCT CGGGT CCTTCGCTGCCGCTA Caul_2013 2158009 - 2158335 + | hypothetical protein TERM 1452 2158384 - 2158332 - f 71 -13.2 -3.06261 | gap 1 CTGGAACGCCGAAGA CTGATCGGCCCAC-GCCCCCGCGCC ACCC GGCGCGGGGGCCACCGCCCGCCCTG GAAAGGCCGAAAGGA Caul_2014 2158522 - 2158791 + | hypothetical protein Caul_2015 2158784 - 2159305 + | conjugal transfer protein TraF Caul_2016 2159293 - 2159925 + | lytic transglycosylase catalytic Caul_2017 2160178 - 2162166 + | hypothetical protein TERM 1453 2162272 - 2162250 - T 80 -15 -3.19642 | opp_overlap 2162250 ATCAGCATCTAGCAA TTGTGCAGCA GCC TGCTGCACAA TTGCTAGATCGCACA TERM 1454 2162250 - 2162272 + T 80 -15 -3.18264 | opp_overlap 2162250 ATCAGCATCTAGCAA TTGTGCAGCA GCC TGCTGCACAA TTGCTAGATCGCACA Caul_2018 2162777 - 2162340 - | PilT domain-containing protein TERM 1455 2162432 - 2162478 + g 70 -8.8 -3.8917 | gap 4, opp_overlap 2162375, overlap 2162420 TGCGCGTGACGACGA CCAG-GC--CGTGGACCCTGGCGG TGG CGGCCAGGG-CCGCGTCGCGCTGG TTCTTGTCCTTGGCC Caul_2019 2163424 - 2162774 - | hypothetical protein Caul_2020 2164809 - 2163946 - | S1/P1 nuclease Caul_2021 2164943 - 2165278 + | hypothetical protein Caul_2022 2165286 - 2166176 + | DNA polymerase III subunit epsilon Caul_2023 2166245 - 2166469 + | hypothetical protein Caul_2024 2167739 - 2166618 - | DNA-directed DNA polymerase TERM 1456 2168729 - 2168712 - g 82 -4.1 -5.03314 | CGCACTGGGAAAAAA CCAGC CACAGTCT GCTGG TCGGCGCGATCCTCC TERM 1457 2168785 - 2168770 - g 72 -6.1 -4.30576 | CGCCGAGGAGGAAAA GACCC TCGCAC GGGTC GCCACCTTCCTCTCC TERM 1458 2169370 - 2169337 - g 82 -13.3 -3.79906 | gap 1, opp_overlap 2169337 CTACGGCGAGAACAA CGCGATCCTGGACA ATTGCCA TGTCC-GGATCGCG TTCTCCTCCAACGAC TERM 1459 2169337 - 2169370 + G 76 -13.3 -3.40403 | gap 1, opp_overlap 2169337 CTACGGCGAGAACAA CGCGATCCTGGACA ATTGCCA TGTCC-GGATCGCG TTCTCCTCCAACGAC Caul_2025 2167970 - 2170006 + | TRAG family protein Caul_2026 2170019 - 2170429 + | CopG/DNA-binding domain-containing protein Caul_2027 2170426 - 2171427 + | P-type conjugative transfer ATPase TrbB Caul_2028 2171427 - 2171768 + | conjugal transfer protein TrbC Caul_2029 2171765 - 2172049 + | putative conjugal transfer TrbD transmembrane protein TERM 1460 2172975 - 2172945 - g 81 -18.3 -2.80016 | overlap 2172942 GGTGATCAGCAACGA GCCCGCGCCGCTG ACCGA CAGCGACGCGGAC AACCAGCTGGCCGAC Caul_2030 2172043 - 2174484 + | CagE TrbE VirB component of type IV transporter system TERM 1461 2174637 - 2174606 - g 73 -7.2 -4.12902 | gap 1 CAACTACGTGCAAAA CCTGCTGACGGCGGC GCG GAC-CCTCCAGCAGG TCAACAACCAGATCC Caul_2031 2174481 - 2175209 + | P-type conjugative transfer protein TrbJ Caul_2032 2175247 - 2176596 + | P-type conjugative transfer protein TrbL Caul_2033 2176600 - 2177385 + | conjugal transfer protein TERM 1462 2178047 - 2178017 - g 100 -16 -4.09685 | opp_overlap 2178036, overlap 2178018 GCTGAGGCGGCAAAA CGCGGCCGCCGCAG CCG CCGCGCCGGCCGCC GACAATGTCGCCGTC TERM 1463 2178046 - 2178018 - g 87 -19.5 -3.05597 | opp_overlap 2178036, overlap 2178017 CTGAGGCGGCAAAAC GCGGCCGCCGCAG CCG CCGCGCCGGCCGC CGACAATGTCGCCGT Caul_2034 2177382 - 2178365 + | P-type conjugative transfer protein TrbG TERM 1464 2178960 - 2178950 - g 70 -8.2 -3.85698 | overlap 2178951 GCCTTTGTCGAGAAA GCCG GCC CGGC CGAGATCCATAACGC Caul_2035 2178362 - 2179561 + | conjugation TrbI family protein Caul_2036 2179575 - 2179796 + | hypothetical protein TERM 1465 2180152 - 2180120 - g 73 -10.6 -3.92659 | gap 1 TCGGTAAAACCCAAA GGCGGCCAACTATCG CTGG CG-CAGTCGGCCACC GCCGATACTCACGGC Caul_2037 2179799 - 2180200 + | hypothetical protein Caul_2038 2180274 - 2180555 + | hypothetical protein Caul_2039 2181223 - 2180552 - | phospholipase/carboxylesterase Caul_2040 2181380 - 2181769 + | hypothetical protein Caul_2041 2182034 - 2182918 + | hypothetical protein Caul_2042 2183977 - 2182925 - | integrase family protein TERM 1466 2184652 - 2184634 - g 81 -8 -4.54727 | opp_overlap 2184651, overlap 2184635 2184636 GTCGCCAAAGGAAAA CCGCGACG TGC CGCCGCTG GACTATCCGTTGGTC Caul_2043 2184131 - 2185108 + | tRNA-dihydrouridine synthase A Caul_2044 2185613 - 2185113 - | hypothetical protein Caul_2045 2185890 - 2186249 + | hypothetical protein Caul_2046 2186486 - 2186256 - | hypothetical protein TERM 1467 2186306 - 2186326 + g 88 -14.7 -3.79747 | CCGGGCGATGGGGCA GGGCGGCCA TGA TGGTCGCCC TTTCCTCGTCGCTGA Caul_2047 2186568 - 2187446 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Caul_2048 2187581 - 2188795 + | acyl-CoA dehydrogenase domain-containing protein Caul_2049 2189005 - 2190162 + | acyl-CoA dehydrogenase domain-containing protein TERM 1468 2190204 - 2190244 + F 100 -22 -3.85698 | opp_overlap 2190193 2190211, overlap 2190211 CAACCGTCGATTGAA GACGAAACCGCCCGCGAC ATGCC GTCGCGGGCGGTTTTTTC TTTGTGAAGCAAGGC TERM 1469 2190237 - 2190211 - f 100 -21.6 -3.93782 | opp_overlap 2190204 2190211 CGATTGAAGACGAAA CCGCCCGCGACA TGC CGTCGCGGGCGG TTTTTTCTTTGTGAA TERM 1470 2190211 - 2190237 + F 100 -20.9 -5.72622 | opp_overlap 2190211, overlap 2190204 CGATTGAAGACGAAA CCGCCCGCGAC ATGCC GTCGCGGGCGG TTTTTTCTTTGTGAA TERM 1471 2190300 - 2190319 + F 73 -2.8 -4.75309 | CGTCCGTGGGCGGAA TTCGTCAG GGTT CGGATGAA TTTTCTTGCGTTTCG Caul_2050 2190443 - 2190565 + | hypothetical protein TERM 1472 2190584 - 2190618 + T 100 -16.4 -4.06562 | opp_overlap 2190588, overlap 2190588 AGGGAGCAGGCAGAA AAAAGGGGCGGTCCGT CTG GCGGACCGCCCCTTGC TTTCTGGTTCGAGTT TERM 1473 2190588 - 2190614 + T 100 -21.6 -3.65415 | opp_overlap 2190588, overlap 2190584 AGCAGGCAGAAAAAA GGGGCGGTCCGT CTG GCGGACCGCCCC TTGCTTTCTGGTTCG TERM 1474 2190614 - 2190588 - T 100 -20.9 -5.28778 | opp_overlap 2190584 2190588 AGCAGGCAGAAAAAA GGGGCGGTCCG TCTGG CGGACCGCCCC TTGCTTTCTGGTTCG Caul_2051 2190948 - 2190649 - | hypothetical protein Caul_2052 2191639 - 2191019 - | hypothetical protein TERM 1475 2191085 - 2191106 + g 72 -8.6 -4.07568 | overlap 2191076 CAGCCAGGCCAGCAC GGCGGGCG TGATGT CGCCGGCC TTTTCCACCACCCGC TERM 1476 2191695 - 2191664 - H 78 -5.1 -4.72007 | overlap 2191666 2191688 CTCCAGGAAAATAAA CAGCGC-GCCGGTCC TTGT GGACAAGCTGCGC-G CGCAGCACGTGAACA TERM 1477 2191694 - 2191666 - H 73 -8.8 -3.97149 | gap 1, overlap 2191664 2191688 CCAGGAAAATAAACA GCGC-GCCGGTCC TTGT GGACAAGCTGCGC GCGCAGCACGTGAAC Caul_2053 2191756 - 2192574 + | hypothetical protein Caul_2054 2192580 - 2194439 + | ABC transporter related Caul_2055 2194495 - 2194677 + | hypothetical protein Caul_2056 2194773 - 2195210 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_2057 2195742 - 2195308 - | hypothetical protein Caul_2058 2196926 - 2195850 - | NADH:flavin oxidoreductase/NADH oxidase Caul_2059 2197171 - 2198112 + | hypothetical protein TERM 1478 2198123 - 2198100 - T 75 -12.4 -3.61715 | opp_overlap 2198093 GATCCCGCGCAAGAA GGCGGCGC ACTGATCG GCGCCGCC CCATCGCTTTCGTCG Caul_2060 2198730 - 2198143 - | ECF subfamily RNA polymerase sigma-24 factor Caul_2061 2199460 - 2198813 - | DSBA oxidoreductase TERM 1479 2199830 - 2199818 - g 75 -5.5 -4.59773 | CTTGACGCTCAAAAA GCCGA CTA TCGAC GATGTTGCTCGGCTT Caul_2062 2199804 - 2200850 + | LacI family transcription regulator TERM 1480 2200990 - 2200966 - f 100 -7.2 -5.36965 | gap 2 TAAGATCAGAAAAAA GCGC-GC-CTTC CTC GAAGAGCCGCGC AAACAAAATTGGGGA Caul_2063 2201013 - 2203850 + | TonB-dependent receptor Caul_2064 2204006 - 2205508 + | tryptophan halogenase Caul_2065 2206533 - 2205517 - | PASs1-related protein TERM 1481 2206427 - 2206475 + g 73 -16.6 -2.67515 | gap 1, opp_overlap 2206384, overlap 2206425 GCGGCGCGCACGATC GGCCAGTCGGCCACGACGGCCTT CAGC ACGGCCGGCGCGCCCG-CTGGCC TGATCTCCTGGTGAA Caul_2066 2206587 - 2207282 + | hypothetical protein Caul_2067 2207303 - 2208745 + | glycoside hydrolase family protein Caul_2068 2209096 - 2208839 - | LuxR family transcriptional regulator Caul_2069 2209453 - 2210130 + | GntR domain-containing protein Caul_2070 2210643 - 2210119 - | carbohydrate kinase Caul_2071 2210873 - 2213884 + | SMP-30/gluconolaconase/LRE domain-containing protein TERM 1482 2213967 - 2213991 + F 100 -7 -5.49809 | opp_overlap 2213969, overlap 2213968 2213969 CCTTCTACCCCAGAC TAGTCCCGGC CTCGC GCCGGGACGC TTTTTTTGAGGTTTG TERM 1483 2213968 - 2213990 + F 76 -10.5 -3.88259 | opp_overlap 2213969, overlap 2213967 2213969 CTTCTACCCCAGACT AGTCCCGGC CTCGC GCCGGGACG CTTTTTTTGAGGTTT TERM 1484 2213989 - 2213969 - f 71 -14 -2.63596 | opp_overlap 2213968 2213967 2213969 TTCTACCCCAGACTA GTCCCGGC CTCGC GCCGGGAC GCTTTTTTTGAGGTT TERM 1485 2213969 - 2213989 + F 74 -14 -2.91328 | opp_overlap 2213969, overlap 2213968 2213967 TTCTACCCCAGACTA GTCCCGGC CTCGC GCCGGGAC GCTTTTTTTGAGGTT TERM 1486 2214186 - 2214215 + G 90 -17.1 -3.46509 | gap 1, opp_overlap 2214163, overlap 2214179 2214199 CTCCAGAGCGCGATC GACGCCGCCGCGGC CAA GCCG-GGCGGCGGC TTGGTGTTCTTGCCC TERM 1487 2214199 - 2214219 + G 73 -12.6 -3.40611 | opp_overlap 2214163, overlap 2214186 2214179 TCGACGCCGCCGCGG CCAAGCCG GGCGG CGGCTTGG TGTTCTTGCCCTCGG Caul_2072 2214033 - 2217044 + | SMP-30/gluconolaconase/LRE domain-containing protein TERM 1488 2217078 - 2217046 - f 81 -15.5 -3.06696 | overlap 2217073 TGCGGCGCCAATAGA TCCAGGCCCCCCGGC GTC GCCGAGAGACCTGGG CGAGCGCGTCGGCGC Caul_2073 2217229 - 2220231 + | TonB-dependent receptor TERM 1489 2220310 - 2220286 - f 75 -14.3 -2.71364 | opp_overlap 2220306 GGATCGCGGCAAGGA CGACCGATCGA GGA TCGAGCGGTCG CCGCCTCATCACCGC TERM 1490 2221144 - 2221120 - g 70 -15.7 -2.77899 | overlap 2221117 CTTCGCCAGCAACGA CGACATGGCCG CCG CGGCCGTGTCG GTGGCCCACCGTCGG Caul_2074 2220431 - 2221444 + | LacI family transcription regulator Caul_2075 2221437 - 2222744 + | major facilitator transporter TERM 1491 2223172 - 2223213 + G 74 -11.6 -3.67976 | gap 2 GGTGGCCAGGCTTTT GGGCGGAG--GAGCGAGGCG CCGG CGCATCGGTCGGCTCCGCCC TTTGACCTTCGTCGG Caul_2076 2223082 - 2224032 + | FkbM family methyltransferase Caul_2077 2224718 - 2224056 - | ABC transporter related TERM 1492 2226196 - 2226223 + G 74 -14 -3.35679 | overlap 2226197 GCGCGCCCGCCTGAG CGCGGCCGGGCG GGAA CGCGCGGCCGCC TTCTCCATGGCGGCG TERM 1493 2226197 - 2226222 + G 77 -17.5 -2.61264 | overlap 2226196 CGCGCCCGCCTGAGC GCGGCCGGGCG GGAA CGCGCGGCCGC CTTCTCCATGGCGGC Caul_2078 2224958 - 2226352 + | glycosyl transferase group 1 Caul_2079 2226349 - 2227533 + | polysaccharide export protein Caul_2080 2228530 - 2227541 - | methyltransferase type 12 Caul_2081 2230992 - 2228539 - | glycosyl transferase group 1 TERM 1494 2228885 - 2228870 - G 70 -3.2 -4.46212 | GTCTTGACGACAAAA CCGC AGCGTTGA GCGG GTAGCCCCTGCAGGT TERM 1495 2229872 - 2229851 - G 75 -5.9 -4.48713 | gap 1 TTCACGAAGAAGAAA TCGGCATGCT CGA AG-ACGCCGA TCGCCCAGGAGATGA Caul_2082 2232248 - 2231025 - | capsule polysaccharide export-like protein Caul_2083 2233107 - 2232292 - | ABC-2 type transporter Caul_2084 2234366 - 2233104 - | glycosyl transferase group 1 Caul_2085 2235524 - 2234403 - | capsule polysaccharide biosynthesis protein TERM 1496 2235268 - 2235292 + g 71 -9.9 -3.70902 | TCGATGCAGACCAGG GGCACGCCCAG CGC CTGGGCCTGGC TTTCGATGTCGGCGG Caul_2086 2235851 - 2236468 + | outer membrane chaperone Skp (OmpH) Caul_2087 2236468 - 2236833 + | hypothetical protein Caul_2088 2236830 - 2237063 + | LuxR family transcriptional regulator Caul_2089 2237252 - 2238931 + | general secretory pathway protein E Caul_2090 2238937 - 2240145 + | type II secretion system protein TERM 1497 2240170 - 2240207 + G 79 -7.6 -4.45544 | gap 1 CCGGAGATTCCCACG GTCGGCGCCGCCCCTCG GCTCG CGACGGGCG-CGATGGC TTTTCATTGCTGGAA Caul_2091 2240142 - 2240600 + | general secretion pathway protein G TERM 1498 2240868 - 2240892 + G 86 -10 -4.56597 | overlap 2240871 GCGCGGACTGATGCT GC-GGCCGGCCG GAA CGG-CGGCCAGC TTTTTCCCGGACGGC Caul_2092 2240584 - 2241003 + | putative general secretion pathway protein H Caul_2093 2241000 - 2241383 + | hypothetical protein TERM 1499 2241655 - 2241696 + G 81 -12.7 -3.83502 | CGGTTGATCTTCCTG GCGCCGCCGGCCGCGCGGG ACGG CCCGGGCGCGCTACGGCGC TTTCGTCTCGAACTG Caul_2094 2241388 - 2242029 + | hypothetical protein Caul_2095 2242026 - 2243063 + | fimbrial assembly family protein TERM 1500 2243095 - 2243135 + G 72 -6.8 -4.3534 | gap 2, overlap 2243097 2243099 CGAACGCCGCCTGGT GGCGGTCGGCGTCCTGGTCG GCG CGATCGGG--GCCGGCTGGC TTTTGGTGGTTGGAC TERM 1501 2243273 - 2243221 - g 81 -19.2 -2.74012 | gap 2 GCACGAGCGCAATCA GCGCCTGCTGG-CCGGCGTCTC-CGC CCT GCGCGAGACGCGGGTCCAGCAGCGGC GATCTGGCGCGGCGT Caul_2096 2243060 - 2243617 + | hypothetical protein Caul_2097 2243595 - 2244098 + | hypothetical protein TERM 1502 2245962 - 2245930 - g 72 -8.4 -4.02817 | gap 1, opp_overlap 2245931 2245945, overlap 2245931 TCGCGACAACAACAA GCGGCTGCGCAACGG GGTG CCGTTCCTCAGC-GC GGTGCCTGTGCTGGG Caul_2098 2244095 - 2246140 + | general secretion pathway protein D Caul_2099 2246137 - 2246991 + | hypothetical protein Caul_2100 2247054 - 2247884 + | hypothetical protein Caul_2101 2248173 - 2248688 + | TonB family protein TERM 1503 2249342 - 2249315 - g 90 -4.8 -5.28942 | gap 1, opp_overlap 2249326, overlap 2249317 TATTGGAAAGAAAAA GATCGGTTTTCGC GTC GCGAAT-CCGAGC GCTAATTGTCTCTAG TERM 1504 2249340 - 2249317 - g 72 -6 -4.27026 | gap 1, opp_overlap 2249326, overlap 2249315 TTGGAAAGAAAAAGA TCGGTTTTCGC GTC GCGAAT-CCGA GCGCTAATTGTCTCT Caul_2102 2248811 - 2249347 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1505 2249792 - 2249832 + G 74 -10.9 -3.76125 | opp_overlap 2249791 CTCGAACTATCATAC CGGCGTCGGCGAGCGGCGC ACG GCGAGACTCGCCGACGGGG TTTCGCTTGACCTCA Caul_2103 2249412 - 2250392 + | anti-FecI sigma factor, FecR TERM 1506 2250401 - 2250417 + F 71 -10.8 -3.53012 | GCGCTGACGCCTGGC CCGGCG AGCGC CGCCGG TTTCGACGCAAAAAG Caul_2104 2250770 - 2252386 + | polypeptide-transport-associated domain-containing protein Caul_2105 2252424 - 2254181 + | MotA/TolQ/ExbB proton channel Caul_2106 2254206 - 2254613 + | biopolymer transport protein ExbD/TolR Caul_2107 2254622 - 2255296 + | TonB-like protein Caul_2108 2255293 - 2257140 + | hypothetical protein Caul_2109 2257143 - 2257790 + | hypothetical protein TERM 1507 2258140 - 2258166 + G 77 -15 -3.14132 | opp_overlap 2258095 2258094 GCCCAGCAGGCCCAG GTCGCCGGCCGC CAG GCGGCCAGCGCC TTGATCAGCAAGGCG TERM 1508 2258213 - 2258178 - g 72 -13.2 -3.21099 | gap 1, opp_overlap 2258204 CGCCTTGATCAGCAA GGCGCCCAACGGCCTGG TCG CC-GGCGGCTTGGCGCC CGCGACCGACGCCGC TERM 1509 2261214 - 2261188 - g 74 -15.8 -2.78384 | TTCTCCCTGACCACA CCCGCCATCGCC TTC GGCGACGGCGTG GCCAGCACCGGCACG TERM 1510 2262130 - 2262158 + G 72 -15.3 -2.88249 | GTTCAGGGTTCTGAC TTCATCGCCGCGC CGG GCGCGGCGGTCAA TCTGTCGGGGGTCTC TERM 1511 2265903 - 2265934 + G 82 -17.2 -3.01712 | opp_overlap 2265900 CGTGGTCAACTATCG CCAGGTCGCCGCCG ACAC CGGCGGCGCGCTGG TGTTGCGCGCGCCGG TERM 1512 2268865 - 2268847 - g 73 -8 -4.13767 | opp_overlap 2268850, overlap 2268800 2268851 2268852 CTGTCGACGCCAAAA CAGACCCG GAT CGGGGCCG GCCGGGATATCGTCA Caul_2110 2257831 - 2270490 + | filamentous haemagglutinin outer membrane protein Caul_2111 2270601 - 2271689 + | peptidase M23B Caul_2112 2273582 - 2271708 - | sulfotransferase TERM 1513 2273631 - 2273610 - R 73 -11.5 -3.63569 | GGAACGGTCGAAGAA GCGGCCGAG CCCC CTCCGCCGC ATCCGCCTCGATCAT Caul_2113 2275309 - 2273828 - | hypothetical protein TERM 1514 2275484 - 2275461 - R 100 -9.4 -5.40072 | TTGGCCGCAAAAAAA GGGGGCCGGC TTTC GCCGGGGCCC CGCCTCGTGGGATCA Caul_2114 2277221 - 2275515 - | hypothetical protein TERM 1515 2276591 - 2276607 + g 79 -2.1 -4.82901 | overlap 2276592 AGCTCGTGATCGTGC CGTCGGC CTG GCGGACC TTTTTGTAAACCGGG TERM 1516 2277327 - 2277304 - R 100 -19.6 -4.67353 | CGACCCATCGAAAAA GGACCCCGGC TTTC GCCGGGGTCC CGCCTCGTGGGATCA Caul_2115 2279054 - 2277357 - | hypothetical protein TERM 1517 2277758 - 2277780 + g 79 -15.6 -3.32769 | overlap 2277751 AGCCGTTGGCCGTGA CACTGGGGTC GTA GACCCCGGTG TTGGTGCTTTCCGGC TERM 1518 2279094 - 2279081 - R 73 -8.1 -4.07568 | overlap 2279084 TTGTCCGTCTGAAAA GAGCC CGCG GGCTC GCGATACCGACGGCG TERM 1519 2279104 - 2279128 + r 83 -9.2 -4.28548 | gap 1, overlap 2279105 GGGCTCGCGATACCG ACGGCG-CCGC CCGT GCGGACGCCGC TTTTCGTAGGTCAGT TERM 1520 2279105 - 2279127 + r 73 -12.7 -3.16647 | gap 1, overlap 2279104 GGCTCGCGATACCGA CGGCG-CCGC CCGT GCGGACGCCG CTTTTCGTAGGTCAG Caul_2116 2280139 - 2279390 - | LuxR family transcriptional regulator Caul_2117 2280772 - 2281161 + | AraC family transcriptional regulator TERM 1521 2282416 - 2282444 + G 72 -13.8 -3.14931 | gap 1 GACCGCGATCCGACA CGGTCGCCGCGCC CAAG GGCGCGCCG-CCG TTCGTCAGGAATCCG Caul_2118 2281158 - 2282489 + | capsule polysaccharide biosynthesis protein Caul_2119 2282486 - 2283748 + | glycosyl transferase group 1 Caul_2120 2283801 - 2284535 + | LuxR family transcriptional regulator TERM 1522 2284617 - 2284583 - T 100 -21.5 -3.69373 | gap 1 GAAATATGGGAAGAA GTCGCCGCCGCGCGCC GAAA GACGCGCGGCGG-GAC GGCCGGTTAGCCGTG Caul_2121 2285730 - 2284624 - | hemolysin-type calcium-binding region TERM 1523 2284929 - 2284903 - G 73 -7.3 -4.1891 | gap 1 GCTGTTGAAGACAAA GTCG-GAACCGT CCGA ACGGGTCACGAC CACCGGATCCACGGC Caul_2122 2286659 - 2285892 - | peptidase A24A domain-containing protein TERM 1524 2286771 - 2286789 + H 89 -11 -4.31412 | CGCCGGAGTGGAGCC TCCCGGAC ATT GTTCGGGA TTTTGGTGGGTATTT TERM 1525 2287123 - 2287140 + H 71 -12.7 -3.05384 | opp_overlap 2287102 2287123 TCCCGATACGAAAAA TCCGGCC AAGG GGCCGGA TTCCCTCAGAACCGG TERM 1526 2287140 - 2287123 - H 100 -12.7 -4.8048 | opp_overlap 2287123, overlap 2287102 TCCCGATACGAAAAA TCCGGCC AAGG GGCCGGA TTCCCTCAGAACCGG TERM 1527 2287196 - 2287222 + H 84 -16.6 -3.02144 | TTCGAATTCTGCGCC GCGCGCCCAG TCGGGAT CTGGGCGCGC TGTTCGAGCAAATCC Caul_2123 2287471 - 2290248 + | TonB-dependent receptor Caul_2124 2290341 - 2290829 + | ECF subfamily RNA polymerase sigma-24 factor Caul_2125 2290914 - 2291915 + | anti-FecI sigma factor, FecR TERM 1528 2293780 - 2293817 + G 86 -13.3 -3.89614 | gap 1, overlap 2293781 2293797 2293797 GACGGCTTCGACCGC CTGGTGGCCGACC-GGCC GCC GGCCTGGACGGCCGCCGA TTTCTCGGCCTTCCG TERM 1529 2293781 - 2293816 + G 75 -16.8 -2.93447 | gap 1, overlap 2293780 2293797 2293797 ACGGCTTCGACCGCC TGGTGGCCGACC-GGCC GCC GGCCTGGACGGCCGCCG ATTTCTCGGCCTTCC Caul_2126 2292028 - 2294988 + | TonB-dependent receptor Caul_2127 2295509 - 2295162 - | putative transposase of insertion sequence TERM 1530 2295472 - 2295523 + g 93 -20.8 -3.21099 | gap 1, overlap 2295474 2295512 TGCCCGTGCGGCCAC GCTGGAGCGCAGGCCATGGCCGCGC GGG GCGCGGCCATGGCG-GCGGGCCATC TTGGTGGTGGCGCCC TERM 1531 2295474 - 2295521 + g 100 -22 -3.17051 | gap 1, overlap 2295472 2295512 CCCGTGCGGCCACGC TGGAGCGCAGGCCATGGCCGCGC GGG GCGCGGCCATGGCG-GCGGGCCA TCTTGGTGGTGGCGC TERM 1532 2295634 - 2295649 + r 100 -4.6 -5.40072 | AGGACGGCTTTGCTC GTCCGC GTGC GCCGAC TTTTTTTGAGCGCGA Caul_2128 2295995 - 2295609 - | ISSpo6, transposase orf A TERM 1533 2295927 - 2295909 - G 71 -11.6 -3.62096 | overlap 2295910 CGCGATGACCCCAAA CCGCGCCG CCG CCGCGCGG CACGACAGCCCACCA TERM 1534 2296356 - 2296368 + G 72 -6.9 -4.30576 | ATCATCTCTACGCTC GCGGC TCT GTCGC TTTTGATGGTCGCGG Caul_2129 2296299 - 2297522 + | Alpha-galactosidase Caul_2130 2297651 - 2298574 + | ROK family protein Caul_2131 2298558 - 2299727 + | mannose-6-phosphate isomerase Caul_2132 2299715 - 2301220 + | carboxylesterase type B TERM 1535 2301256 - 2301241 - f 72 -7.5 -4.18303 | overlap 2301242 2301253 ACGACAAACGACAAA GCGGC GACAAA GCCGC GCGGAGGAAAGACCA TERM 1536 2304183 - 2304153 - g 71 -11 -3.62046 | overlap 2304154 GGAGCTGGTCAATAA CGGCCTGACGCCGA TCG CCGGCGCCAGCCTG CGGGCCCGGGTCGTG Caul_2133 2301271 - 2304705 + | glycoside hydrolase family protein Caul_2134 2304705 - 2305451 + | GDSL family lipase Caul_2135 2306656 - 2305448 - | ROK family protein TERM 1537 2306261 - 2306249 - G 75 -4.7 -4.57569 | overlap 2306251 2306257 GGACGCCTCGAAAAA GGCCG AAA CGTCC TCGGGGCTGGCGAAG Caul_2136 2308069 - 2306726 - | sugar transporter Caul_2137 2308396 - 2311437 + | TonB-dependent receptor TERM 1538 2311453 - 2311488 + F 100 -12.4 -4.59773 | gap 1, overlap 2311455 TCTAGCTTCATCCCC CTGCGGCCCGCCC-CTC CCT GCGTGGGCGGGCCGCTC TTTTTCAAGGTGGGA TERM 1539 2311455 - 2311486 + F 100 -19.4 -3.91506 | gap 1, overlap 2311453 TAGCTTCATCCCCCT GCGGCCCGCCC-CTC CCT GCGTGGGCGGGCCGC TCTTTTTCAAGGTGG Caul_2138 2311507 - 2313012 + | tryptophan halogenase Caul_2139 2313644 - 2312979 - | hypothetical protein TERM 1540 2313852 - 2313830 - R 100 -16.3 -5.40474 | ATTCGGTCAAAAAAA CAGCCCGGC TTGGG GCCGGGCTG TGGAAAGTGAGCGAT Caul_2140 2316199 - 2313953 - | Beta-glucosidase TERM 1541 2314687 - 2314706 + g 75 -10 -4.09685 | CTGAGGCGACGGCGT CGATCAGG GCGT CCTGGTCG TTTTCCAGAGTCAGC TERM 1542 2316264 - 2316282 + r 71 -13.8 -2.52464 | AGGCGTTGGCTTTAC CCGGCCCT GAC GGGGCCGG TGGATTCGCGGACGA Caul_2141 2317282 - 2316260 - | LacI family transcription regulator TERM 1543 2317889 - 2317861 - H 86 -12.3 -4.10744 | overlap 2317862 2317864 CGAGCGAAAGAAGAA GCAGCCCCGTCGA AAA TCGGCGGGGCCGA GAACGGCCATAAAAA TERM 1544 2317888 - 2317862 - H 81 -15.8 -3.05723 | overlap 2317861 2317864 GAGCGAAAGAAGAAG CAGCCCCGTCGA AAA TCGGCGGGGCCG AGAACGGCCATAAAA TERM 1545 2317886 - 2317864 - H 78 -14.8 -3.07355 | overlap 2317862 2317861 GCGAAAGAAGAAGCA GCCCCGTCGA AAA TCGGCGGGGC CGAGAACGGCCATAA TERM 1546 2320001 - 2319989 - g 81 -10.5 -4.3255 | CCTTGAAGGAACAAA GCGCC TAC GGCGC GGCCAACTTCGAGAT Caul_2142 2317924 - 2321028 + | TonB-dependent receptor TERM 1547 2321050 - 2321080 + F 100 -14.1 -4.56597 | gap 1, opp_overlap 2321041, overlap 2321052 GTCAAACCTCCCTGC G-GGCCGCTGTGAC CCCT GTCACAGCGGCTTC TTTTTCCGAGCAGGG TERM 1548 2321052 - 2321077 + F 100 -19.1 -4.40561 | overlap 2321050 CAAACCTCCCTGCGG GCCGCTGTGAC CCCT GTCACAGCGGC TTCTTTTTCCGAGCA Caul_2143 2321138 - 2322676 + | tryptophan halogenase Caul_2144 2322695 - 2324209 + | tryptophan halogenase Caul_2145 2324462 - 2324232 - | hypothetical protein TERM 1549 2324912 - 2324876 - g 75 -4.9 -4.57073 | opp_overlap 2324884 2324885 TACGGGCTCGAAAAA GACGCTGACGACGGCCA ACC TCGCCGCCCTGGGCGCC GAGCGCCTGGCCGAT Caul_2146 2324853 - 2326232 + | hypothetical protein TERM 1550 2326351 - 2326333 - f 72 -4.5 -4.5442 | GTCGCAACGACAAAA GCCTCGA TTGCC TAGAGGC GAGCGGCGGACCTAT TERM 1551 2326930 - 2326962 + G 70 -9 -3.92659 | overlap 2326927 TTCGACGCCACGCCG CCGCTGCTCGCCGG TTTCT CCGTCGAACAGGGG TTTGCATTTTAGCGA Caul_2147 2326402 - 2326974 + | hypothetical protein Caul_2148 2327114 - 2328607 + | TolC family type I secretion outer membrane protein Caul_2149 2328724 - 2329263 + | hypothetical protein TERM 1552 2329426 - 2329405 - f 89 -17.3 -3.25088 | opp_overlap 2329405, overlap 2329397 CGCGAAATCCAGGAA GGCGGTCGC TCCG GCGACCGCC TTTTTCCGTCCTAAA TERM 1553 2329405 - 2329426 + F 100 -17.3 -4.68593 | opp_overlap 2329405 2329397 CGCGAAATCCAGGAA GGCGGTCGC TCCG GCGACCGCC TTTTTCCGTCCTAAA TERM 1554 2331923 - 2331970 + G 77 -15.4 -3.21099 | gap 1 CTGACCCTGGCGCGC CTGGACAGCGCCCG-CGAGGCCG ACT CGGTCCCGACCGGCGCGGTCCCG TTCGTGCTGGGCGAG TERM 1555 2332074 - 2332056 - g 73 -10.2 -3.90588 | overlap 2332037 2332036 GACTTGCGAAGGAAA TCGCCGGC CAC GCAGGCGA GATCGAAAAGACCGC TERM 1556 2332199 - 2332150 - g 78 -8.3 -4.25104 | gap 1, opp_overlap 2332164, overlap 2332135 GGTGGTCGAGGAAAA CCGCGAGC-GCCTGGCCGAGGCCG AAG CGGCCAAGGCCAAGCTGGAAGCAG CCTTGGCGCGCCTGG Caul_2150 2329505 - 2332228 + | valyl-tRNA synthetase Caul_2151 2332632 - 2332276 - | hypothetical protein Caul_2152 2334001 - 2332772 - | beta-lactamase TERM 1557 2333122 - 2333097 - G 74 -11.1 -3.72695 | ACCGTCTCCAGCAAA GTCAGCACGTC GCCG GCCGTGCCGAC CATTCCCGCGCCGCC TERM 1558 2334684 - 2334668 - g 78 -13.7 -3.62046 | CCAGGGCGTCAAGAA GGGCGAC CGG GTCGCCC TGATCATGCGCAACC Caul_2153 2334351 - 2336126 + | AMP-dependent synthetase and ligase TERM 1559 2336160 - 2336141 - T 100 -15 -4.11216 | GGCGGACCGCCAAAA GCCTCCCC CGTG GGGGAGGC GATCGCGTATGACCA TERM 1560 2336208 - 2336264 + T 95 -20.7 -3.23274 | opp_overlap 2336181 2336182 2336215 GGACGAGCGCGTAGC GCGAAGATCCGGGACCGACGCCTGAGC TCA GCGCTTCCGGCGGTCCCGGATCTGCGC TTCGCTTGTCCGGGA TERM 1561 2336257 - 2336215 - T 71 -13.2 -3.04144 | opp_overlap 2336208, overlap 2336181 2336182 CGCGTAGCGCGAAGA TCCGGGACCGACGCCTGAGC TCA GCGCTTCCGGCGGTCCCGGA TCTGCGCTTCGCTTG Caul_2154 2337850 - 2336339 - | amidase Caul_2155 2337953 - 2338696 + | hemolysin A TERM 1562 2338773 - 2338750 - T 100 -19.6 -4.19735 | GGCGCCAAAAGGAAA GCCGCCGACC CGAA GGTCGGCGGC TCCAAGATGATCGAA Caul_2156 2339440 - 2338805 - | hypothetical protein TERM 1563 2339679 - 2339655 - H 78 -6.5 -4.63527 | gap 1, opp_overlap 2339672, overlap 2339656 2339657 GCATGACTGTAAAAA GCTCGGAACC GGTCAA GGTTCCGA-C GGACGAACGGAACTG Caul_2157 2339701 - 2340927 + | (Uracil-5)-methyltransferase Caul_2158 2340956 - 2342047 + | methyltransferase type 11 TERM 1564 2342053 - 2342038 - T 70 -7.5 -4.07568 | opp_overlap 2342040 GCTGCTGCTCGAAAA GCCGC TCTGAC GCGGC GCGTTTCTTCGCTTG TERM 1565 2342040 - 2342056 + T 71 -5.7 -4.2528 | opp_overlap 2342038 TGCTGCTCGAAAAGC CGCTCTG ACG CGGCGCG TTTCTTCGCTTGGAC Caul_2159 2343254 - 2342277 - | PDZ/DHR/GLGF domain-containing protein TERM 1566 2343501 - 2343450 - R 80 -14.6 -3.17075 | gap 3, opp_overlap 2343450, overlap 2343432 2343452 CGCCGCCCAAGGGAA GATGGAGCCATCGCGCCCAGCGTCC TTGGC GGACGC-GG-CGCGATGGCTCG-CC GATTCGTCAGGCGTC TERM 1567 2343500 - 2343452 - R 86 -16.1 -3.14878 | gap 2, opp_overlap 2343450, overlap 2343432 2343450 CCGCCCAAGGGAAGA TGGAGCCATCGCGCCCAGCGTCC TTGGC GGACGC-GG-CGCGATGGCTCGC CGATTCGTCAGGCGT Caul_2160 2343663 - 2343508 - | hypothetical protein Caul_2161 2343848 - 2344969 + | radical SAM domain-containing protein TERM 1568 2345041 - 2345027 - T 78 -3.4 -5.07652 | opp_overlap 2345033, overlap 2345028 TGGGTTAAAACAAAA GCCTAG AGC CCCGGC CTGATGCAATCAGGT Caul_2162 2345920 - 2345270 - | HAD family hydrolase Caul_2163 2345993 - 2346475 + | hypothetical protein Caul_2164 2346773 - 2347711 + | transposase IS116/IS110/IS902 family protein Caul_2165 2349254 - 2347755 - | lytic transglycosylase catalytic TERM 1569 2349293 - 2349281 - R 71 -4.7 -4.4017 | overlap 2349270 CGAAGGCCGAGAAAA CGGCC AGA GGGCG AGCTAGAAGCTGCAA Caul_2166 2350195 - 2349377 - | phage SPO1 DNA polymerase-related protein Caul_2167 2350360 - 2352033 + | electron-transferring-flavoprotein dehydrogenase TERM 1570 2352068 - 2352095 + F 100 -19.2 -5.06414 | opp_overlap 2352048 2352047 ATATCGGCTGTACGG GGCGCGGTTCGA ATGC TCGGACCGCGCC TTTTTCTTGCGGCGC TERM 1571 2353251 - 2353197 - g 74 -16.4 -2.80816 | gap 1, overlap 2353210 CCTGGAGCTATCAGA GCGGCGGCGACAAGCC-CAAGGCCA TCGCCC TGGCCCAGCAGGTCGCCGCCGCCGC GCCCAAGGACCGCGA Caul_2168 2352137 - 2353858 + | TPR repeat-containing protein Caul_2169 2353922 - 2354803 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase TERM 1572 2354947 - 2354975 + T 100 -18.9 -4.17048 | opp_overlap 2354948, overlap 2354948 GACACCCATGGAAAA AGGCCCGGAAGCT TTA AGCTTCCGGGCCC TTCTTTTAGACCGAA TERM 1573 2354974 - 2354948 - T 100 -22.4 -4.67755 | opp_overlap 2354947 2354948 ACACCCATGGAAAAA GGCCCGGAAGCT TTA AGCTTCCGGGCC CTTCTTTTAGACCGA TERM 1574 2354948 - 2354974 + T 100 -22.4 -3.09908 | opp_overlap 2354948, overlap 2354947 ACACCCATGGAAAAA GGCCCGGAAGCT TTA AGCTTCCGGGCC CTTCTTTTAGACCGA Caul_2170 2356542 - 2355004 - | ammonium transporter TERM 1575 2356398 - 2356449 + g 72 -14.9 -2.94099 | gap 1, overlap 2356401 CGGCGGCGGCGGCGG GCG-CGGCGGGAGCCGGCGCGGCC TCGGC GGGCGCGGCGGCGGCCGGCGCCGC TGTGTCCTGAGCGAA TERM 1576 2356401 - 2356451 + g 70 -14.6 -2.78384 | overlap 2356398 CGGCGGCGGCGGGCG CGGCGGGAGCCGGC-GCGGCCTCG GCGGG CGCGGCGGCGGCCGGCGCC-GCTG TGTCCTGAGCGAAGG Caul_2171 2356908 - 2356570 - | nitrogen regulatory protein P-II Caul_2172 2357231 - 2357581 + | hypothetical protein Caul_2173 2357665 - 2358048 + | hypothetical protein TERM 1577 2358108 - 2358083 - f 83 -16.1 -2.84325 | opp_overlap 2358083, overlap 2358080 2358078 CGGCTTGAAACACCA GTCGGCGGGCC GTAG GGTCCGCCGAC TTTTTTCTGGCCCTG TERM 1578 2358083 - 2358108 + F 100 -18.3 -5.252 | opp_overlap 2358080 2358078 2358083 CGGCTTGAAACACCA GTCGGCGGGCC GTAG GGTCCGCCGAC TTTTTTCTGGCCCTG Caul_2174 2358135 - 2359043 + | glycyl-tRNA synthetase subunit alpha Caul_2175 2359049 - 2361235 + | glycyl-tRNA synthetase subunit beta TERM 1579 2361814 - 2361794 - T 86 -12.5 -4.07568 | overlap 2361795 GCCGTGCGCCCAAAA GCCTCCCCC TGT GGGGGAGGG ACTGGGTGGTCGCCG TERM 1580 2361813 - 2361795 - T 84 -16 -3.04398 | overlap 2361794 CCGTGCGCCCAAAAG CCTCCCCC TGT GGGGGAGG GACTGGGTGGTCGCC Caul_2176 2363510 - 2361831 - | cyclohexanone monooxygenase Caul_2177 2365390 - 2363582 - | methyl-accepting chemotaxis sensory transducer Caul_2178 2365570 - 2366760 + | carbohydrate-selective porin OprB TERM 1581 2367731 - 2367712 - g 73 -12.8 -3.47941 | GATCAAGGATTACAA GGGCGCCG TGCG CGACGCCC TGGGCAAGCCCTTCC Caul_2179 2367128 - 2369815 + | pyruvate phosphate dikinase Caul_2180 2371047 - 2369845 - | integrase catalytic region Caul_2181 2371515 - 2371174 - | excinuclease ABC subunit C Caul_2182 2372882 - 2371539 - | hypothetical protein Caul_2183 2373392 - 2374582 + | hypothetical protein TERM 1582 2374701 - 2374742 + T 73 -10.8 -3.64882 | overlap 2374706 CCCCATCCGACCCCT TCGGGGCCACCTTCCCCC CATCAA GGGGGAAGGTGACTTAGG TTCTACTTCTTCTTG TERM 1583 2374706 - 2374737 + T 84 -15.9 -3.26932 | overlap 2374701 TCCGACCCCTTCGGG GCCACCTTCCCCC CATCAA GGGGGAAGGTGAC TTAGGTTCTACTTCT Caul_2184 2377075 - 2374745 - | DEAD/DEAH box helicase domain-containing protein Caul_2185 2377407 - 2377946 + | hypothetical protein Caul_2186 2378593 - 2379408 + | peptidyl-prolyl cis-trans isomerase cyclophilin type Caul_2187 2379408 - 2380259 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 1584 2380287 - 2380309 + F 70 -9.8 -3.60792 | opp_overlap 2380302 ACCGTGACTCTTCAT CCGCTCGG GATTCAA CCGGGCGG TTTCCCCGTTGGGGA TERM 1585 2380485 - 2380446 - g 86 -19.4 -3.21099 | gap 1 GCCTGTCACGATCAA GATGCGCCCCGACCTGGCC CCC GGCCACGTCGAG-CGCATC AAGGAACTGGTCCGC Caul_2188 2380384 - 2380851 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 1586 2380893 - 2380874 - T 76 -10.6 -3.93038 | opp_overlap 2380874 GATTTGAAGACCAAA GGCCTCGG GAAA CCGGGGCC TTTTCATTATCGCGA TERM 1587 2380874 - 2380893 + T 100 -12.8 -4.48987 | opp_overlap 2380874 GATTTGAAGACCAAA GGCCTCGG GAAA CCGGGGCC TTTTCATTATCGCGA Caul_2189 2381874 - 2380900 - | endonuclease/exonuclease/phosphatase TERM 1588 2381737 - 2381707 - G 72 -13.9 -3.21099 | CGCGCCCAGGACCAA GCCGACCAGGCCG CAGCC CAGCCAGGCCGGC GCCAGATGAGTCAGG TERM 1589 2381902 - 2381916 + H 74 -4.9 -4.60041 | opp_overlap 2381889 2381891, overlap 2381900 CACAGCCGCATGACC GTCGC GCCTG GCGGC TTTTTGCGCGTCGAT TERM 1590 2383025 - 2383045 + G 74 -11.1 -3.73982 | opp_overlap 2383010 GCGGCCTATGAGCAC GCGATCGCC GCC GGCTATCGC TTCTATTCCTATGGC Caul_2190 2381996 - 2383117 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase Caul_2191 2383117 - 2384232 + | queuine tRNA-ribosyltransferase Caul_2192 2384952 - 2384239 - | hypothetical protein TERM 1591 2385357 - 2385378 + H 81 -4.3 -4.98522 | overlap 2385358 AAGCTCGCCGCGACC GTGCGTTCC CACC GGATCGCAG TTTTTCTGTAACCTT Caul_2193 2385545 - 2386414 + | sulfate ABC transporter, inner membrane subunit CysT Caul_2194 2386414 - 2387274 + | sulfate ABC transporter, inner membrane subunit CysW TERM 1592 2388046 - 2388104 + G 82 -13.7 -3.72576 | gap 2, overlap 2388047 GTGTCGGGCGGACGG TTCACGGCCGGGCCGGTGACGCTGCCGGC GCC GCAGGCCGC--CAACGGCGCGGCCGTGGC TTTCGTGCGGCCCCA TERM 1593 2388047 - 2388103 + G 80 -17.2 -2.83403 | gap 2, overlap 2388046 TGTCGGGCGGACGGT TCACGGCCGGGCCGGTGACGCTGCCGGC GCC GCAGGCCGC--CAACGGCGCGGCCGTGG CTTTCGTGCGGCCCC Caul_2195 2387293 - 2388312 + | sulfate ABC transporter, ATPase subunit Caul_2196 2389305 - 2388325 - | transglutaminase domain-containing protein Caul_2197 2390274 - 2389333 - | hypothetical protein Caul_2198 2391828 - 2390305 - | hypothetical protein Caul_2199 2392071 - 2393858 + | surface antigen (D15) Caul_2200 2393855 - 2398045 + | hypothetical protein Caul_2201 2398254 - 2399510 + | hypothetical protein Caul_2202 2399513 - 2400517 + | arginine/ornithine succinyltransferase subunit TERM 1594 2400608 - 2400665 + G 95 -29.1 -2.73124 | gap 1, overlap 2400608 GCGAGGTGATCTGGC GCCAGGC-GACGGCCTCGACCGCCGAGG TGG CCGCGGCGGTCGAGGCCGCCCGCAAGGC CTTTCCGGCCTGGGC TERM 1595 2400608 - 2400666 + G 100 -23.1 -3.55444 | gap 2, overlap 2400608 GCGAGGTGATCTGGC -GCCAGGC-GACGGCCTCGACCGCCGAGG TGG CCGCGGCGGTCGAGGCCGCCCGCAAGGCC TTTCCGGCCTGGGCC Caul_2203 2400514 - 2401968 + | succinylglutamic semialdehyde dehydrogenase Caul_2204 2401965 - 2403308 + | succinylarginine dihydrolase Caul_2205 2403311 - 2403823 + | GCN5-related N-acetyltransferase Caul_2206 2404623 - 2403820 - | response regulator receiver protein Caul_2207 2404831 - 2404950 + | hypothetical protein Caul_2208 2405836 - 2404955 - | phenylalanine 4-monooxygenase Caul_2209 2406247 - 2405918 - | hemimethylated DNA binding protein TERM 1596 2407494 - 2407473 - g 81 -12.9 -3.85864 | CGATCAGCAGAAGAA GCCGCGCCG ACGT CGGCGAGGC GGCTCCGGTCGGGCG Caul_2210 2406409 - 2407536 + | Ppx/GppA phosphatase TERM 1597 2407798 - 2407769 - g 75 -4.9 -4.56597 | gap 1, overlap 2407771 CCGGTTCTTCAAAAA GGGC-GCTAAGGTC ATC GACCTCGGCTGCGC GCCGGGCGGCTGGCT Caul_2211 2407533 - 2408240 + | ribosomal RNA methyltransferase RrmJ/FtsJ Caul_2212 2408237 - 2409280 + | TrkA domain-containing protein Caul_2213 2409355 - 2410818 + | inosine-5'-monophosphate dehydrogenase TERM 1598 2410970 - 2411001 + G 79 -10.8 -4.08064 | gap 1, overlap 2410971 GTGACGCTGACGGGC ATGGCGG-GGCGCCT CGA ACGCGCCTCCGCCAA TTTTCGCGAGACCTT Caul_2214 2410829 - 2411218 + | hypothetical protein Caul_2215 2411225 - 2412496 + | Fmu (Sun) domain-containing protein TERM 1599 2412926 - 2412954 + G 73 -16.8 -2.62735 | overlap 2412913 CGAGTTGGGCGTGCC GCTGCTGGCCGT CTGCT ATGGCCAGCAGC TGCTGTGCGACCTGT Caul_2216 2412657 - 2414243 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1600 2414412 - 2414440 + F 100 -14.7 -5.4833 | opp_overlap 2414425 AGGGCGAGCGGCTGA TACCGTCAGGC AAGTCAG GCCTGACGGTA TTTTTTCTTACATCA TERM 1601 2414630 - 2414605 - g 83 -8.3 -4.64024 | gap 1, opp_overlap 2414605 2414603 2414622 AAACCAAAGAAGAAA CCGTACAAGGTC GCG GACCGTG-ACGG TATTTACGTCGTGGT Caul_2217 2414560 - 2415816 + | integrase family protein Caul_2218 2416173 - 2415874 - | phage transcriptional regulator, AlpA TERM 1602 2416323 - 2416265 - R 84 -13.7 -3.79506 | opp_overlap 2416272 2416310 2416312 AATCAAAGGCAACAA GACGGCGGGGCGACACGACCGCGATCC GTTCG GGACCTGGGTCGCGTCGCCGTATCGTC AGCCGTTGACGGCGT Caul_2219 2416600 - 2416322 - | histone family protein DNA-binding protein Caul_2220 2417123 - 2416704 - | hypothetical protein TERM 1603 2417219 - 2417179 - R 77 -13.1 -3.60627 | overlap 2417180 CGATCGGAGGTCAAA GGTCGCGAGGGCTGGGCGC CTC GCGCGCAACGCGCGCGACT GGGCTCTACGGCGTC TERM 1604 2417218 - 2417180 - R 81 -16.6 -2.76162 | overlap 2417179 GATCGGAGGTCAAAG GTCGCGAGGGCTGGGCGC CTC GCGCGCAACGCGCGCGAC TGGGCTCTACGGCGT Caul_2221 2417498 - 2417310 - | hypothetical protein Caul_2222 2418198 - 2417551 - | 2OG-Fe(II) oxygenase Caul_2223 2418569 - 2418195 - | hypothetical protein Caul_2224 2418882 - 2418562 - | hypothetical protein TERM 1605 2419660 - 2419671 + G 76 -7.2 -4.25104 | opp_overlap 2419657 TGTTTGAGACCATTC CCGC TGGC GCGG TTTTCGTGCGCGCCC TERM 1606 2420046 - 2420022 - g 76 -2.7 -4.75372 | overlap 2420023 ATCAGCCACGAAAAA GGACGCTCTCA CGT CGAGTATGTCC CCACCCAGGTGGTCA Caul_2225 2419029 - 2420888 + | RES domain-containing protein Caul_2226 2421640 - 2420885 - | XRE family transcriptional regulator TERM 1607 2421040 - 2421056 + g 75 -9.3 -4.11394 | AAATGACCTTGATGC CGCGCGC CAG GAGCGCG TTTTCGGCCTGCACT TERM 1608 2421649 - 2421683 + r 86 -13.6 -3.88583 | opp_overlap 2421643, overlap 2421648 2421678 CTAACATCAGCCCCT CCACGCAAGGTGTAGA TGT TCCACGCGTTGCGTGG TTTGTCCACGCTTTG TERM 1609 2421678 - 2421694 + r 74 -9.4 -3.85698 | opp_overlap 2421643, overlap 2421649 GATGTTCCACGCGTT GCGTGG TTTGT CCACGC TTTGTGGGGGCGAGA TERM 1610 2421793 - 2421769 - R 72 -12.1 -3.28712 | opp_overlap 2421770, overlap 2421770 CTTTGGCCCGCATAA GGCCATCGCGC TGT GCGCGATGACT CTCTTGAAGATCCTT TERM 1611 2421792 - 2421770 - R 77 -15.6 -2.57132 | opp_overlap 2421770, overlap 2421769 TTTGGCCCGCATAAG GCCATCGCGC TGT GCGCGATGAC TCTCTTGAAGATCCT TERM 1612 2421770 - 2421792 + r 75 -13.4 -3.08073 | opp_overlap 2421770 2421769 TTTGGCCCGCATAAG GCCATCGCGC TGT GCGCGATGAC TCTCTTGAAGATCCT TERM 1613 2422155 - 2422137 - R 87 -17.4 -2.94912 | overlap 2422148 2422149 CGGTGAAGCCAGAGA CCCGCCGG AAA CCGGCGGG GAAGCCGAGCCCGAG TERM 1614 2422533 - 2422501 - R 80 -14.8 -3.21595 | opp_overlap 2422501, overlap 2422502 AAGGCCGAGCAGGAA CGCGCCGCGCGC GAGGGCGAG GCGCCCGGCGCG GTGCCGTTCCTCAAG TERM 1615 2422537 - 2422502 - R 74 -14.6 -2.52635 | gap 1, opp_overlap 2422501, overlap 2422501 AGGCCGAGCAGGAAC GCGCCGCGCGCGAGGGC GAG GCGCCCG-GCGCGGTGC CGTTCCTCAAGCGCT TERM 1616 2422655 - 2422673 + r 81 -10.2 -4.13767 | ACGTCGAGGCCTTGA TCGCCGCG ACC CGCGCCGA TTTTCGGATCGGCGG Caul_2228 2423872 - 2422880 - | integrase family protein TERM 1617 2423851 - 2423837 - G 71 -11.4 -3.62597 | opp_overlap 2423848 CCGATCGGTGAAGAA GCGCTG GAT CAGCGC GGGCAAGGCGGCGGC Caul_2229 2424810 - 2423869 - | integrase family protein TERM 1618 2424242 - 2424204 - G 77 -15.4 -3.13403 | gap 1, opp_overlap 2424239, overlap 2424202 TGTCGGTGACGAACA TCG-GCGTGACCGGATG GCCGAT CAGCCGGTCACGCTCGA CACGATAGTCGATCA Caul_2230 2426018 - 2424807 - | integrase family protein TERM 1619 2425645 - 2425661 + g 70 -9.3 -3.9122 | opp_overlap 2425642 GAGTGCGGAATACTG CGCGGAC TGA GGCCGCG TTGTTTGGCGAGATA Caul_2231 2426244 - 2426483 + | hypothetical protein Caul_2232 2426630 - 2428507 + | nuclease TERM 1620 2428536 - 2428557 + F 100 -18.7 -4.62054 | GGCGCCTGCCTTCAG GCCCCCGCG CTCG CGCGGGGGC TTTTCCTTTGGTTCC TERM 1621 2428669 - 2428644 - f 93 -17.5 -3.53444 | TGACTGGCGGCCAAA GCCCCCGCGCC TTGC GGCGTGGGGGC GCGTGGACCTTAGCC Caul_2233 2429283 - 2429609 + | hypothetical protein TERM 1622 2429619 - 2429644 + T 100 -21.9 -3.54424 | opp_overlap 2429611 2429610 GACTAAGGTCCGCGC GCCCCCACGCC GCAA GGCGTGGGGGC TTTGGCGCGCTCAGG Caul_2234 2430076 - 2429699 - | hypothetical protein TERM 1623 2430359 - 2430404 + H 100 -21.9 -3.16742 | gap 1, overlap 2430361 GGGCGCGGCCGGTCG CGGCGGCCCGGAACGACGGT CTCCCCC GCCGTCGC-CCGGGCCGCCG TTCCTGGCGCTTCCC Caul_2235 2430445 - 2430780 + | hypothetical protein Caul_2236 2431319 - 2430795 - | helix-turn-helix domain-containing protein TERM 1624 2431005 - 2430960 - G 70 -13.1 -3.33708 | gap 1, overlap 2430962 2430963 GAAGCCAGACACCAA CAGCGCCGAGGGCA-CCCGCGC CAA GCGCGGCCCGACCTCGGCGAAG AGGTCGCGGATCAGG TERM 1625 2431003 - 2430962 - G 72 -14.3 -3.23045 | gap 1, overlap 2430960 2430963 AGCCAGACACCAACA GCGCCGAGGGCA-CCCGCGC CAA GCGCGGCCCGACCTCGGCGA AGAGGTCGCGGATCA TERM 1626 2431002 - 2430963 - G 77 -17.8 -2.53345 | gap 1, overlap 2430962 2430960 GCCAGACACCAACAG CGCCGAGGGCA-CCCGCGC CAA GCGCGGCCCGACCTCGGCG AAGAGGTCGCGGATC TERM 1627 2431212 - 2431202 - G 70 -8.2 -3.90291 | opp_overlap 2431206 AGGTCCGCAAGGAAA CGCC CAT GGCG ACGGCGGTCTCCGCG TERM 1628 2431544 - 2431501 - H 74 -12.6 -3.30619 | AAGCATCGCGCACAA GACACGCAACGATCCG GGAGCAAGGGGT CGGATCGTTGCGCATC GAATCAGTTCTCCAC TERM 1629 2431555 - 2431593 + H 71 -9.4 -3.72576 | overlap 2431556 GCATCGAATCAGTTC TCCACAGGCATCTGGCGC ATG GGGCCGGCTGTCTGAGGG TTTGGTCGACGCGGA Caul_2237 2431655 - 2432251 + | GntR family transcriptional regulator TERM 1630 2432294 - 2432308 + F 71 -8.5 -3.92522 | GCGCCTCCTTGTGAG GCCGC GACTA GCGGC TTTCTAGCCTTAGAG Caul_2238 2432333 - 2432449 + | hypothetical protein Caul_2239 2432593 - 2432703 + | hypothetical protein TERM 1631 2432711 - 2432742 + F 100 -26.6 -4.35524 | GGGACTGACAGCGGC GCGCGGTCGGCGGC CCAA GCCGCCGGCCGCGC TTTTCGGTTTGGAAA Caul_2240 2432781 - 2433458 + | hypothetical protein TERM 1632 2434782 - 2434764 - g 77 -17.4 -2.52464 | overlap 2434747 CCGTTTTCGAAGCCA GCCGCCGC GGC GCGGCGGC CCACCTCGTCCACCC Caul_2241 2433455 - 2435161 + | asparagine synthase Caul_2242 2437581 - 2435158 - | peptidase S9 prolyl oligopeptidase TERM 1633 2435555 - 2435532 - G 74 -11 -3.68351 | gap 1, overlap 2435533 CGGCGATCAGGGAAA CCTGGGGCGGC ACC GCCGCCC-AGA AGCTGGCGAGGTCAG TERM 1634 2437281 - 2437258 - G 70 -13.1 -3.31144 | overlap 2437233 TCCCGAGGGCGAGAA GGGGCCGGC GATGTA GCCGACCCC CCGCTCAGTCGGCAG Caul_2243 2440599 - 2437597 - | TonB-dependent receptor Caul_2244 2441726 - 2440725 - | anti-FecI sigma factor, FecR TERM 1635 2441690 - 2441709 + g 70 -8.6 -3.82208 | gap 1, overlap 2441679 AGTCAGCGGCCTCGC GAGTCGCGC GCG GCGC-ACTC TTTCGGTCTTTGATC Caul_2245 2442242 - 2441739 - | ECF subfamily RNA polymerase sigma-24 factor Caul_2246 2442379 - 2442732 + | XRE family transcriptional regulator TERM 1636 2442822 - 2442834 + F 83 -9.1 -4.28994 | ACCCTTCGATATTTT GCCGA AAC TCGGC TTTTCGTGCCTGCTC Caul_2247 2442898 - 2443644 + | hypothetical protein Caul_2248 2443765 - 2444052 + | hypothetical protein Caul_2249 2444045 - 2444524 + | hypothetical protein Caul_2250 2444521 - 2445039 + | Type IV secretory pathway protease TraF-like protein Caul_2251 2445036 - 2445866 + | lytic transglycosylase catalytic TERM 1637 2445983 - 2445957 - f 86 -7.3 -4.67608 | gap 1, opp_overlap 2445957 2445958 2445960, overlap 2445958 TAGGGCAAGATAAAA GGACA-GGGACC CTCG GGTCCCATGTCA TTGATGGTGTTGAGG TERM 1638 2445982 - 2445958 - f 71 -10.8 -3.39842 | gap 1, opp_overlap 2445957 2445958 2445960, overlap 2445957 AGGGCAAGATAAAAG GACA-GGGACC CTCG GGTCCCATGTC ATTGATGGTGTTGAG Caul_2252 2446096 - 2447817 + | hypothetical protein Caul_2253 2447829 - 2448164 + | Type IV secretory pathway VirD4 protein-like protein Caul_2254 2449004 - 2448276 - | IstB ATP binding domain-containing protein Caul_2255 2450499 - 2448991 - | integrase catalytic region Caul_2256 2450624 - 2452345 + | TRAG family protein TERM 1639 2452566 - 2452576 + G 78 -8.2 -4.25283 | opp_overlap 2452556 2452566, overlap 2452558 CACAATCGCCAACGA GGCC GTC GGCC TTTTCGTGAAGACCT Caul_2257 2452342 - 2452758 + | hypothetical protein Caul_2258 2454823 - 2453084 - | hypothetical protein TERM 1640 2453995 - 2454007 + g 82 -9.1 -4.48221 | TCATGTGCTGATTGA CGCCA GGG TGGCG TTTTATCGCTTCCTC Caul_2259 2455599 - 2454862 - | hypothetical protein Caul_2260 2456452 - 2455592 - | hypothetical protein Caul_2261 2457596 - 2456433 - | DNA-cytosine methyltransferase Caul_2262 2457801 - 2457589 - | hypothetical protein Caul_2263 2458278 - 2457892 - | hypothetical protein TERM 1641 2458642 - 2458623 - H 70 -10.6 -3.55444 | TTTCGACTGTTGAAA GCCGGTGG GACC CCGCCGGC AAAGCGTTCGTCCCG Caul_2264 2458677 - 2460050 + | hypothetical protein TERM 1642 2460235 - 2460205 - g 83 -9 -4.59773 | gap 1 TGTTACTGCCAAAAA CCCAACCCCGTGC AGCACG GC-CGGGCTTGGG ACATCGAGCATGTGA TERM 1643 2460478 - 2460464 - g 75 -4.9 -4.58395 | TCTATGCGCCAAAAA CGGCA AAGGG CGCCG AGACCCTCAGAGTGT Caul_2265 2460040 - 2460663 + | hypothetical protein TERM 1644 2462563 - 2462585 + G 72 -3.3 -4.62471 | gap 1, overlap 2462564 2462580 CGGGAGGGATTTCTG GCGCC-TGCG GGTG CGCGTGGCGA TTTTTCGCAATTCAA Caul_2266 2460853 - 2464380 + | superfamily I DNA/RNA helicase Caul_2267 2464377 - 2466131 + | phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein Caul_2268 2466388 - 2467365 + | P-type conjugative transfer ATPase TrbB Caul_2269 2467365 - 2467736 + | conjugal transfer protein TrbC Caul_2270 2467736 - 2468002 + | conjugal transfer protein TrbD Caul_2271 2468005 - 2470443 + | putative conjugal transfer protein TrbE Caul_2272 2470440 - 2471171 + | P-type conjugative transfer protein TrbJ TERM 1645 2471352 - 2471383 + F 70 -10.2 -3.61398 | gap 2, opp_overlap 2471348 AGGGCGATGAAGCCT GC-CGCGCG-GCCT GGGCGG AGGCGCGCGCGCGC TTCTTCGGGCGGCCG TERM 1646 2471784 - 2471802 + G 75 -5.2 -4.57073 | overlap 2471772 GCAGGCGGCCAGCGA GCTGGG CGGCTTT CCCGGC TTTTTCGAAAACATC TERM 1647 2472044 - 2472058 + G 72 -5.6 -4.4017 | TGGCGGTCATCGTCG GGATCG GCT CGAGCC TTTTCTCGGAATTCA Caul_2273 2471404 - 2472660 + | P-type conjugative transfer protein TrbL Caul_2274 2472660 - 2473346 + | conjugal transfer protein Caul_2275 2473343 - 2474143 + | P-type conjugative transfer protein TrbG Caul_2276 2474140 - 2475294 + | conjugation TrbI family protein Caul_2277 2475291 - 2475515 + | hypothetical protein Caul_2278 2475930 - 2475520 - | XRE family transcriptional regulator Caul_2279 2476432 - 2476049 - | hypothetical protein Caul_2280 2477529 - 2476780 - | hypothetical protein TERM 1648 2476952 - 2476928 - G 78 -8.6 -4.30014 | gap 1, overlap 2476932 CGCAGGAACCCAAAA TCGACGTCGTG CTCG CACG-CGCCGA CGAAGAGGAAATAGA Caul_2281 2478230 - 2477541 - | hypothetical protein Caul_2282 2479105 - 2478452 - | stress protein TERM 1649 2479313 - 2479365 + G 70 -12.6 -3.26471 | gap 1 CCGACAACATCTTTC CGGT-ACGGTCGCCGGCCCGAGACG CGTG CGTCTGGGGGCAGCGTCCTTCACCG TTGATGTCGGCGTGC TERM 1650 2479620 - 2479592 - g 72 -4.4 -4.56597 | gap 1, overlap 2479593 2479595 GGCGCCGTTCAAAAA GGAGGCCGGCCGC CTGT GCA-CCGGCCACT GCGTCGCCCATACCC Caul_2283 2479281 - 2479763 + | hypothetical protein TERM 1651 2480329 - 2480343 + G 78 -12.8 -3.76224 | opp_overlap 2480325 GTCGGACGAGACCGT GCGCGC CTC GCGCGC TTTGGTCGATGCGGG TERM 1652 2480645 - 2480603 - g 73 -12.1 -3.52539 | overlap 2480630 GAAGCCGAACGAGAA GCAGCGG-CCAAGCGCGTTCG GAT CGAACGCATTCGGGCCG-TGC CGGACGTGACCGTCT Caul_2284 2479826 - 2481088 + | outer membrane efflux protein Caul_2285 2481088 - 2482260 + | RND family efflux transporter MFP subunit Caul_2286 2482292 - 2485534 + | CzcA family heavy metal efflux protein TERM 1653 2485540 - 2485578 + F 74 -12.4 -3.45571 | overlap 2485533 2485541 GACGACCTGAGCCGG GGCGCCGGCGTGGT CCCGTCCCCCA GCCACGCCGGCGCG TTCCTCTTTCCAAAG TERM 1654 2485541 - 2485577 + F 77 -15.9 -2.67021 | overlap 2485540 2485533 ACGACCTGAGCCGGG GCGCCGGCGTGGT CCCGTCCCCCA GCCACGCCGGCGC GTTCCTCTTTCCAAA Caul_2287 2485602 - 2486924 + | sodium/calcium exchanger membrane region Caul_2288 2486926 - 2487186 + | hypothetical protein Caul_2289 2487208 - 2487558 + | hypothetical protein TERM 1655 2488061 - 2488042 - g 70 -12.1 -3.30441 | CAGCACTGGCCAGAA GCGCGGC CGCCAC GCCGCGC ACGACCACGCCCATA TERM 1656 2489431 - 2489413 - g 76 -8.1 -4.26076 | gap 1 CGATGGCGAGGAAAA GCTGGGCC AGGC GGCCC-GC CTGAAGGCCGAGGGC Caul_2290 2487575 - 2490196 + | heavy metal translocating P-type ATPase Caul_2291 2490879 - 2491346 + | activator of Hsp90 ATPase 1 family protein Caul_2292 2491393 - 2491737 + | hypothetical protein Caul_2293 2492113 - 2492484 + | hypothetical protein Caul_2294 2492541 - 2493770 + | outer membrane efflux protein TERM 1657 2494743 - 2494781 + G 86 -13 -4.12532 | opp_overlap 2494720 TGGCCAAGCGGTCCG CGTTCGGATCACGCCGCG CGG CGCAGCCAGCTCCGAACG TTTCTCTGTGCCCGA Caul_2295 2493781 - 2495004 + | RND family efflux transporter MFP subunit TERM 1658 2495376 - 2495355 - g 78 -9.5 -4.11216 | gap 1 TTCCGACCCTGAAAA TCGA-ACGCG TGG CGCGTGTCGA TGTGACCTACAGCCC Caul_2296 2494994 - 2495431 + | hypothetical protein TERM 1659 2496762 - 2496747 - g 72 -9 -4.10161 | overlap 2496749 GATCATTGTCGAAAA CAGCCT GCGT AGGCTG GCCGAGCGGCAGCAC TERM 1660 2497888 - 2497935 + G 78 -8.8 -4.30576 | overlap 2497885 ATGTTGCCGGAACGG GCCGGCGGCGGCGCGCGCCTGT CGGT GCCGTTGCGCGACGTGGCCCGC TTTTCCTACTCGGAA TERM 1661 2498235 - 2498262 + G 78 -13.4 -3.66921 | GGCGGTGTTCTCGGC CATCCCGCTGGC CCTC GCTGGCGGGGTG TTTGGCCTTGCGCTT Caul_2297 2495428 - 2498670 + | CzcA family heavy metal efflux protein TERM 1662 2498732 - 2498719 - g 72 -5.9 -4.29738 | opp_overlap 2498728 CTACACCGACGAAAA CGCCA TGAC CGGCG ATCGCCGCTTCTTCG Caul_2298 2498672 - 2499013 + | hypothetical protein TERM 1663 2499022 - 2499049 + T 100 -21.3 -3.33696 | TTACTAGGCCATAGG CGGCGCGCCGG CTGCAA CCGGCGCGCCG TTCGTTCAACACCCG Caul_2299 2500482 - 2499385 - | acyltransferase 3 Caul_2300 2501031 - 2500627 - | MerR family transcriptional regulator Caul_2301 2501099 - 2501755 + | cation efflux protein TERM 1664 2502736 - 2502697 - g 84 -15.8 -3.40522 | gap 1, opp_overlap 2502725, overlap 2502669 AGTGGCCCACCAGAA GCTGGCCGCCAGCCTCA AGGCCTA TGAGGCCGGCGACC-GC AAGGCCGCCGCCGAC TERM 1665 2503012 - 2503025 + G 72 -5.9 -4.32034 | overlap 2502989 TATCCTGCTGCGCGA GGGTC TGGA GGCCC TTTTGATCGTGGTCG Caul_2302 2501807 - 2503765 + | iron permease FTR1 TERM 1666 2504878 - 2504894 + G 79 -15.1 -3.29144 | opp_overlap 2504866 CGATCGCCATCATTG GCCCGCC CGA GGCGGGC TTCTGGCGCGCGTGG TERM 1667 2505014 - 2505026 + G 71 -10.5 -3.71649 | opp_overlap 2505014 2505013 GCTGCGCCTCGAAAC CGCCG CCT CGGCG TTTGGGCTTTCCAGC Caul_2303 2504529 - 2505284 + | AraC family transcriptional regulator Caul_2304 2506132 - 2505236 - | fatty acid hydroxylase Caul_2305 2506726 - 2506223 - | putative integral membrane protein Caul_2306 2507062 - 2507631 + | TetR family transcriptional regulator Caul_2307 2509999 - 2507648 - | copper-translocating P-type ATPase TERM 1668 2508260 - 2508300 + g 85 -18.4 -3.05463 | gap 2, opp_overlap 2508250 GAAGACGGCGGTCGT CC-CG-TCCTGGCGCAGGGC TTC GGCCTGCGCCAGGAGCGCGG TTAGGTCGACACCCT TERM 1669 2509479 - 2509466 - G 71 -9.5 -3.71848 | GCCGCGCACGAAGAA GGGCC AGCC GGCCC AGAGCACGACAGGCG TERM 1670 2510177 - 2510137 - R 89 -14.8 -3.8512 | gap 1, overlap 2510169 2510170 GATCCAGGACAAGAA GCCAGGCCGTTCA-GTCGC CTGA GCCACATGAAGGGCCTGGC GCGCGCCGCGGCCGG Caul_2308 2511511 - 2510237 - | hypothetical protein Caul_2309 2511767 - 2511501 - | hypothetical protein Caul_2310 2512285 - 2512001 - | hypothetical protein TERM 1671 2512096 - 2512069 - G 81 -7.6 -4.57569 | overlap 2512072 2512084 CCAGGGCCCCAAAAA CCAGCGACCAGC AAAG GCCCGTCGCCAG GGCCGCCACCGATCC Caul_2311 2514338 - 2512416 - | multicopper oxidase type 3 TERM 1672 2513767 - 2513737 - G 78 -10.2 -4.19258 | ACATTGGACGGAAAA GCCAGGGCGAAGCC GGC GACGACGCCCAGGC TCATCACGCCCCAGA Caul_2312 2514518 - 2515798 + | hypothetical protein Caul_2313 2516373 - 2515795 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1673 2516107 - 2516086 - G 71 -3 -4.62783 | gap 1, overlap 2516090 GACGGACCCGAAAAA GAAG-CGGC GCACG GCCATCTTC CGCCCGCGGTCTCGC Caul_2314 2516810 - 2516370 - | protein of unknown function, Spy-related Caul_2315 2517100 - 2516807 - | hypothetical protein TERM 1674 2517185 - 2517216 + r 79 -10.8 -3.85698 | gap 1, opp_overlap 2517186, overlap 2517186 GGAACGCGCGCGAAA ATGACGCGCGGCGCA AGG TGCGCCG-GCGCCAG TTTCTACAGGCAGCC TERM 1675 2517186 - 2517215 + r 77 -14.3 -2.91276 | gap 1, opp_overlap 2517186, overlap 2517185 GAACGCGCGCGAAAA TGACGCGCGGCGCA AGG TGCGCCG-GCGCCA GTTTCTACAGGCAGC TERM 1676 2517215 - 2517186 - R 100 -16.5 -4.08692 | gap 1, opp_overlap 2517185 2517186 GAACGCGCGCGAAAA TGACGCGCGGCGCA AGG TGCGCCG-GCGCCA GTTTCTACAGGCAGC Caul_2316 2517623 - 2517231 - | hypothetical protein TERM 1677 2520290 - 2520311 + G 71 -10.9 -3.56092 | gap 1, overlap 2520257 2520286 GCGGCGGGCGCGCTC GCGAC-GACC TTT GGTCTGTCGC TTTCGCCGATGGTGG Caul_2317 2517947 - 2520436 + | heavy metal translocating P-type ATPase Caul_2318 2520433 - 2520864 + | MerR family transcriptional regulator Caul_2319 2520861 - 2521292 + | hypothetical protein Caul_2320 2521663 - 2521319 - | hypothetical protein Caul_2321 2521804 - 2522031 + | hypothetical protein TERM 1678 2522088 - 2522070 - T 70 -11.6 -3.21099 | GGCGTGGACGACCAA GTCGGCCG GGG CGGCCGTC ACGCCTGCAAGGCGA Caul_2322 2522506 - 2522087 - | MerR family transcriptional regulator TERM 1679 2522611 - 2522601 - H 73 -6.8 -4.32436 | overlap 2522602 2522605 ATATGACGACCAAAA GCGA TCC TCGC CCCGAGATCGGCGAC TERM 1680 2522877 - 2522921 + H 73 -8.6 -4.05004 | gap 4 GAGACTGCGCTGACC GCG-CGCCGTCGC-G-GCTGGC GATCG GCCTGCTCAGCG-CGGCGACGC TTCTTGTTCTCCTCG Caul_2323 2522998 - 2523222 + | hypothetical protein Caul_2324 2526376 - 2523227 - | CzcA family heavy metal efflux protein Caul_2325 2527914 - 2526373 - | RND family efflux transporter MFP subunit TERM 1681 2527629 - 2527604 - G 76 -13.3 -3.53012 | gap 1 TCGGCGCGGGCCAAA CGCAG-GCCCAG GGT CTGGGCGCCGCG CGGATCGACGGCCAC TERM 1682 2527801 - 2527770 - G 78 -13.6 -3.56987 | gap 1 CATACCAGTAGAGAA CCTTGCGGCCGGGCG CAT CGCCCG-CCGCCGGG ACGGGCGCCTTGCGC Caul_2326 2529134 - 2527911 - | outer membrane efflux protein TERM 1683 2528651 - 2528678 + g 70 -8.4 -3.85698 | gap 1, opp_overlap 2528647, overlap 2528627 CCGTCAAGGCAGCCG GCG-TCGTGTCGC GCA GCGGCGTGATCGC TTTCTCGACCGCGGC Caul_2327 2529527 - 2529282 - | hypothetical protein Caul_2328 2530022 - 2529651 - | hypothetical protein Caul_2329 2531160 - 2530057 - | acyltransferase 3 TERM 1684 2531544 - 2531523 - H 72 -4.5 -4.59109 | gap 1 GAGATCCTCGAAAAA TACGC-GATG TGA CATCTACGTA TTCAGACCCGGGACC Caul_2330 2531639 - 2531989 + | hypothetical protein Caul_2331 2532128 - 2532589 + | MerR family transcriptional regulator Caul_2332 2532600 - 2532827 + | hypothetical protein Caul_2333 2532890 - 2533225 + | hypothetical protein TERM 1685 2534078 - 2534050 - g 72 -6.6 -4.26079 | gap 1, overlap 2534051 GGAAACGACCGAAAA GCCGCCGC-GCCG GCTC CGGCCGCGACAGT CGCTCCAGGCGGGGC TERM 1686 2534191 - 2534156 - g 71 -9.6 -3.73068 | opp_overlap 2534167, overlap 2534114 CGCGCAAGCCAAGAA GCTGGACCGGCGCG TTGCGAGT CGCGCAGATCCTGC GCGAAACGCCGACCA Caul_2334 2533249 - 2535258 + | oxidoreductase FAD-binding subunit Caul_2335 2535258 - 2535986 + | hypothetical protein TERM 1687 2536220 - 2536194 - g 72 -5.8 -4.34402 | gap 1, opp_overlap 2536194 2536193 GCGTGGAGACGAAAA CCTGCCTGAGC TGCCAT GC-CGGGCAGG ATTTCGGCGGCAAGC Caul_2336 2535983 - 2536699 + | hypothetical protein Caul_2337 2536686 - 2537153 + | hypothetical protein TERM 1688 2537368 - 2537349 - g 82 -16.4 -3.30771 | GCATAGCCTGGAGAA GGGCGGCG CCCA CGCCGCCC CGGGCCATATCGCGA Caul_2338 2537167 - 2537598 + | hypothetical protein Caul_2339 2537777 - 2538142 + | hypothetical protein TERM 1689 2538166 - 2538192 + F 88 -8.7 -4.67982 | gap 2, opp_overlap 2538165 2538166, overlap 2538161 TGATGAGGAGGAAAG GCCCGC--CCCGG TGA TCGGGATGCGGGC TTTTCTTAAGTCAAG Caul_2340 2538297 - 2539817 + | aldehyde dehydrogenase TERM 1690 2539986 - 2540016 + G 73 -7.6 -4.15222 | gap 1 TCTGCACGCCGCGCA GGGC-GATTGGCC GGTCAA GCCCAATCCGCCC TTTATTCCAGGCCAT TERM 1691 2540196 - 2540181 - g 72 -6.1 -4.28361 | CGAACTGCAGCAAAA CACCG GATATT CGGTG AACGGCAGCTTCGCT Caul_2341 2539837 - 2540883 + | alcohol dehydrogenase Caul_2342 2540906 - 2541400 + | hypothetical protein Caul_2343 2541832 - 2541416 - | response regulator receiver protein Caul_2344 2542536 - 2541910 - | two component LuxR family transcriptional regulator Caul_2345 2544062 - 2542533 - | PAS/PAC sensor signal transduction histidine kinase TERM 1692 2542952 - 2542917 - G 87 -8.8 -4.67234 | opp_overlap 2542951, overlap 2542951 ATCGAACCTGAAAAA GCTCCTGACGCCGCGC TCTC GCGCACCGACCAGAGC CAGATTGCCGGCTTC Caul_2346 2545335 - 2544418 - | copper resistance D domain-containing protein TERM 1693 2544777 - 2544757 - G 72 -8.9 -4.09864 | overlap 2544747 ACCCACCCCGGAAAA CCCCTCCAG GGC CTGGTGGAG TTCGCGCAACGACGT TERM 1694 2545289 - 2545261 - G 100 -13.8 -4.64844 | overlap 2545263 GCCATAGAGACAAAA GAGCGGCGATCC GAACA GGACCGCCGCGC CGATGTACTGGACCA TERM 1695 2545287 - 2545263 - G 91 -15 -3.9328 | overlap 2545261 CATAGAGACAAAAGA GCGGCGATCC GAACA GGACCGCCGC GCCGATGTACTGGAC Caul_2347 2545708 - 2545340 - | copper resistance protein CopC Caul_2348 2546299 - 2545817 - | hypothetical protein Caul_2349 2546952 - 2546341 - | cytochrome c family protein Caul_2350 2547558 - 2547067 - | hypothetical protein Caul_2351 2548788 - 2547592 - | copper resistance B precursor TERM 1696 2548638 - 2548656 + g 82 -4.4 -5.00616 | opp_overlap 2548638 CCTTCTTCTTGACAA CCGGCTTC TGG GCAGGCGG TTTTTTGGCAACCGG Caul_2352 2550620 - 2548785 - | CopA family copper resistance protein TERM 1697 2549142 - 2549175 + g 70 -4.3 -4.52589 | CCCGGTCAGCCGGAT CTCCAGCGCCCGCGT CGGC GCGCGCACGTCGGGG TTTTGTGTCAAGGCG Caul_2353 2550854 - 2552023 + | acyltransferase 3 Caul_2354 2553232 - 2552087 - | hypothetical protein TERM 1698 2553379 - 2553351 - H 76 -6.1 -4.67038 | opp_overlap 2553356 GCTGTAAAAGTAAAA TTCAACATTCCCA TGA TTGGAATGTTTAA ATGCTCGTACATCTG TERM 1699 2555212 - 2555179 - g 76 -2.3 -4.78572 | gap 1, overlap 2555181 CGGCAACGAACAAAA GAGCGTCACCGCCGAT GTC ACCGGC-ACGCTGCTC AGCCTGCCGGCCGGC TERM 1700 2555219 - 2555247 + G 75 -16 -2.88999 | gap 1, overlap 2555224 ACGCTGCTCAGCCTG CCGGCCGGCCGCC TGGC GGTGGCCG-CCGG TGTCGTCTATCGCCA Caul_2355 2553791 - 2556484 + | TonB-dependent receptor TERM 1701 2556493 - 2556527 + F 100 -21.4 -3.65902 | opp_overlap 2556484, overlap 2556494 CAACTAGTCCGTCTC CGCGCCTGGCTGGCCT CGC GGGCCGGCCAGGCGCC TTTCGATCAGGTGAA TERM 1702 2556494 - 2556526 + F 100 -24.9 -2.79327 | opp_overlap 2556484, overlap 2556493 AACTAGTCCGTCTCC GCGCCTGGCTGGCCT CGC GGGCCGGCCAGGCGC CTTTCGATCAGGTGA Caul_2356 2556547 - 2557251 + | hypothetical protein Caul_2357 2557259 - 2557975 + | PepSY-associated TM helix Caul_2358 2558032 - 2558766 + | histidine utilization repressor Caul_2359 2559061 - 2558870 - | hypothetical protein Caul_2360 2560350 - 2559190 - | hypothetical protein Caul_2361 2561772 - 2560933 - | formyltetrahydrofolate deformylase Caul_2362 2563080 - 2561839 - | amidohydrolase TERM 1703 2562467 - 2562511 + g 72 -13.7 -3.16564 | gap 1, overlap 2562468 2562471 GAAAACTGGTTCATC CAT-ATGGGATCGGTCGGGG ACATCA CCCCGCCCGATCCCATGATC TTGATGCAATGGGCG TERM 1704 2562468 - 2562509 + g 80 -16.6 -3.14602 | overlap 2562467 2562471 AAAACTGGTTCATCC ATATGGGATCGGTCGGGG ACATCA CCCCGCCCGATCCCATGA TCTTGATGCAATGGG TERM 1705 2562471 - 2562506 + g 83 -20.5 -2.77701 | overlap 2562468 2562467 ACTGGTTCATCCATA TGGGATCGGTCGGGG ACATCA CCCCGCCCGATCCCA TGATCTTGATGCAAT TERM 1706 2562715 - 2562703 - G 84 -4.7 -4.96848 | overlap 2562704 2562705 GCCGGCATAGAAAAA GCGCG GCC CGCGG ATCAGGCCGTCGACA Caul_2363 2563635 - 2563174 - | sarcosine oxidase gamma subunit Caul_2364 2566624 - 2563670 - | sarcosine oxidase alpha subunit family protein TERM 1707 2564204 - 2564170 - G 72 -3.5 -4.62069 | overlap 2564172 2564183 CTCCCAGCTCAAAAA GTCGGCGCACCA-AGGC GTC GCCTGCGCTG-GCCGGC ACGCAAAGCTCGTAG TERM 1708 2565410 - 2565382 - G 70 -13.1 -3.34344 | overlap 2565405 CCAGGTTGGAACCAA GCCCGATGGCTGG GTT CCAACCACCGGCC ATCGCGACGAGATCG TERM 1709 2566300 - 2566262 - G 72 -5.9 -4.25104 | gap 2, opp_overlap 2566278, overlap 2566247 2566276 GGTCTTGTAGTAAAA CCCCGCGACCAGAAGCGGC GCG GCCGC--CTGGTTGAGGGC CAGGAGGTCGAAGCG Caul_2365 2566914 - 2566621 - | sarcosine oxidase delta subunit heterotetrameric TERM 1710 2566909 - 2566922 + g 72 -5.2 -4.45544 | overlap 2566895 AGTGAAGGTTCGGTT GGGC ACCTTC GCCC TTTTCATTGATGAGC Caul_2366 2568145 - 2566892 - | sarcosine oxidase beta subunit family protein Caul_2367 2568263 - 2569198 + | AraC family transcriptional regulator TERM 1711 2571470 - 2571444 - g 79 -7.8 -4.46926 | opp_overlap 2571450, overlap 2571446 TATTCGACGAGAAAA CCCCGATCGTCC CGG GGCCGTTCGGCG CGATCTTCCAGGACA Caul_2368 2569397 - 2571535 + | TonB-dependent receptor TERM 1712 2571547 - 2571581 + F 100 -22.9 -3.95424 | CTGAGGCGAGGCTGG CCGCGCCGCGCGATC ATGGG GATCGCGCGGAGCGG TTTGCTCTTGCTGAT Caul_2369 2571651 - 2572994 + | major facilitator transporter TERM 1713 2573475 - 2573504 + G 78 -8.5 -4.33417 | opp_overlap 2573486 GGGGTTCCGGAAGGC GGCGAGCAGAAGG CCGA CCATTTGCTGGCC TTTCTTATCGATGAG Caul_2370 2573079 - 2573975 + | putative esterase Caul_2371 2574026 - 2576098 + | prolyl oligopeptidase Caul_2372 2576185 - 2577801 + | gamma-glutamyltransferase Caul_2373 2577858 - 2579558 + | hypothetical protein Caul_2374 2579555 - 2580484 + | hypothetical protein TERM 1714 2580494 - 2580531 + T 71 -8.4 -3.85165 | gap 1, overlap 2580516 GCCTAAACGTCCGCT CAAGCCCATCCGCGGCT CAGCC GGCCGCGGCTGC-CTTG TTTGGCTTTGACGTG Caul_2375 2582084 - 2580567 - | aldehyde dehydrogenase Caul_2376 2583400 - 2582117 - | FAD dependent oxidoreductase Caul_2377 2583510 - 2584406 + | LysR family transcriptional regulator Caul_2378 2584725 - 2585060 + | hypothetical protein Caul_2379 2585053 - 2585544 + | hypothetical protein Caul_2380 2588544 - 2585521 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 1715 2588861 - 2588843 - H 77 -13.1 -3.61764 | CGAGCAATGCCTAAA GCGGCGG CGCAC CCGCCGC TGGAACCGCTCCATG Caul_2381 2588874 - 2589461 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1716 2589827 - 2589876 + G 74 -14.1 -3.29144 | gap 1 CGGAATCGGCGCGGT CGCGATCCTGGGCGGCGGCGTCGC CAC GCG-CGCCTTCGCCCGCCAGCGCG TTGTCACCGGCGTGG Caul_2382 2589567 - 2590481 + | regulatory protein PupR, putative TERM 1717 2591296 - 2591284 - g 73 -10.5 -3.8211 | opp_overlap 2591291 CGTGATCCAGAACAA GGCCG GTC CGGCC CCCGATTGGTCGGTG Caul_2383 2590565 - 2593345 + | TonB-dependent receptor Caul_2384 2593361 - 2594485 + | glycerophosphoryl diester phosphodiesterase Caul_2385 2595501 - 2594632 - | LysR family transcriptional regulator Caul_2386 2595606 - 2596610 + | alcohol dehydrogenase TERM 1718 2597165 - 2597185 + G 74 -15.4 -3.05384 | opp_overlap 2597139 AGGCGCCGGCGGCCT GGCGGCGC GACCA GCGCCGCC TTGGCTCGGACGCGG Caul_2387 2596591 - 2597220 + | AraC family transcriptional regulator TERM 1719 2597274 - 2597236 - T 100 -21.8 -3.78934 | CTCGCGGCAGAATAA GCCAGGGCGCACTGATCA GAG CGATCAACGCGCCCCGGC GGGTCTAGGCCGATT Caul_2388 2597626 - 2597279 - | alkylhydroperoxidase Caul_2389 2598256 - 2597795 - | hypothetical protein TERM 1720 2598382 - 2598431 + H 85 -14.5 -3.53811 | gap 5, overlap 2598405 GTGAAGCCTTGTGAA GGCCG-GC-CGTGCGCTAGGCCCTGG CGG CCAGG-CCT-GCGC-CGCGCGCGGCC TTTGCGACGCCTAAC Caul_2390 2598521 - 2599111 + | AraC family transcriptional regulator TERM 1721 2599099 - 2599121 + F 75 -11.9 -3.53811 | GCAAGCGTCGGGTCA GGCGGCGTC ATGAA GCCGCCGCC TTTCCCCCACGTGCG TERM 1722 2600606 - 2600636 + G 71 -9.7 -3.76373 | opp_overlap 2600568, overlap 2600613 AGCCACGACCTGCTG GGCGAGCGC-GACCG GCG CGTTCTGCGC-CGCC TTTCGCTGTTCACAG TERM 1723 2600877 - 2600850 - g 78 -12 -3.76224 | gap 1 CGCGGAGCCAGGAAA CCGACGTGATCGC TGA GCG-CCACGCCGG GCAAGTTCTCGCGCG Caul_2391 2599403 - 2602267 + | transcriptional regulator Caul_2392 2602459 - 2603781 + | aldehyde dehydrogenase TERM 1724 2604028 - 2604049 + G 100 -13.7 -4.57569 | gap 1 GCGGTCATCACGGCC GCCGCGG-CG ATG CGTCCGCGGC TTTTTCACGCGCTGG Caul_2393 2603785 - 2604507 + | alpha/beta hydrolase fold TERM 1725 2604559 - 2604524 - f 71 -5.5 -4.36914 | gap 3, overlap 2604525 2604526 GTGTTGGGCAGAAAA TGC--CGCAT-GGCGCCG CTC CGGGGCCGATGCGATGCA AATATAGACCACCCA Caul_2394 2604676 - 2605104 + | hypothetical protein TERM 1726 2605203 - 2605154 - T 81 -12.7 -3.75665 | TCAGACCTGACGAAA GGTCGGCTCGTCGCCCCCGTC TGGGGAGG GTTGAGGGCGACGAGCCTTCC GAAGCCCCGGACTCC Caul_2395 2606213 - 2605272 - | beta-lactamase domain-containing protein Caul_2396 2607024 - 2606647 - | hypothetical protein TERM 1727 2606921 - 2606900 - G 81 -7.2 -4.60797 | overlap 2606916 CGCCGAGACACAAAA CCGGGCTG ACATAG CAGCCAGG CGTCAACGTCGGCGT TERM 1728 2607149 - 2607192 + r 71 -9.4 -3.74158 | gap 1, overlap 2607151 AGCGGTCTGGATGCT CGGCGGCGCCAGCG-TGGCGA CTA TCGACGGCGCTGGCGCAAGCG TTTCACTCTGGTTCG Caul_2397 2607743 - 2607195 - | hypothetical protein Caul_2398 2608574 - 2607831 - | short-chain dehydrogenase/reductase SDR Caul_2399 2608709 - 2609680 + | AraC family transcriptional regulator Caul_2400 2612691 - 2609677 - | TonB-dependent receptor TERM 1729 2612725 - 2612709 - R 71 -10.8 -3.53012 | opp_overlap 2612708 2612707 CTGTCCCTCCCTAAA GCGCCG TTGGC CGGCGC GATTTGACGCTTCTC Caul_2401 2614155 - 2613199 - | LacI family transcription regulator TERM 1730 2613506 - 2613483 - G 75 -10.2 -4.07568 | gap 1, overlap 2613484 CGTTGCTGGCGAAAA TCGCGGTCGGC GGC GCCG-CCGCGT CGAGCAGTTGCTCTG TERM 1731 2614443 - 2614491 + r 77 -3.8 -4.91459 | gap 2, overlap 2614444 CTTTTCACATTCAGC GCTGGCGGCG-CGGGCCGGAT-GA GCG TCGATCCTGCTCGCCGCTGATAGA TTTTTCTCCGTCTTG TERM 1732 2614616 - 2614594 - R 76 -13.6 -3.1203 | opp_overlap 2614597, overlap 2614592 2614582 2614597 TAATGACCTAATAGA GAAGATCTGT TGG ACAGATCTTC TGGAATCGGTCGCAG TERM 1733 2614613 - 2614597 - R 71 -9.5 -3.69482 | opp_overlap 2614597, overlap 2614594 2614592 2614582 TGACCTAATAGAGAA GATCTGT TGG ACAGATC TTCTGGAATCGGTCG TERM 1734 2614680 - 2614729 + r 100 -13.5 -4.42619 | gap 2, opp_overlap 2614671, overlap 2614682 2614683 CCCAAATCCTGGGCG GTCTCGCCCGGACCCGGAGCGGC TTCATC GCC-C-CCGGGTCCGGGCGCCTC TTTTATGAAATGTTC TERM 1735 2614682 - 2614727 + r 88 -14.7 -3.81279 | gap 2, opp_overlap 2614671, overlap 2614680 2614683 CAAATCCTGGGCGGT CTCGCCCGGACCCGGAGCGGC TTCATC GCC-C-CCGGGTCCGGGCGCC TCTTTTATGAAATGT TERM 1736 2614683 - 2614726 + r 90 -18.2 -2.88044 | gap 2, opp_overlap 2614671, overlap 2614682 2614680 AAATCCTGGGCGGTC TCGCCCGGACCCGGAGCGGC TTCATC GCC-C-CCGGGTCCGGGCGC CTCTTTTATGAAATG TERM 1737 2614851 - 2614821 - R 76 -12.6 -3.53012 | gap 1, overlap 2614823 TGGCTTTCGGCGAAA GATCGCCGCCCGC GCTGGG GCGAGCGGCGA-C TATGGCCTGTCGGCA TERM 1738 2614850 - 2614823 - R 88 -16.3 -3.34398 | overlap 2614821 GCTTTCGGCGAAAGA TCGCCGCCCGC GCTGGG GCGAGCGGCGA CTATGGCCTGTCGGC Caul_2402 2615892 - 2614933 - | hypothetical protein Caul_2403 2617886 - 2615952 - | protein of unknown function DUF303 acetylesterase putative TERM 1739 2617398 - 2617420 + g 78 -16.2 -3.01712 | GATGGTTTGAGGCGT CGCCGCCGTC CAG GCCGGCGGCG TATTGAAGCCAACCA TERM 1740 2617650 - 2617598 - G 95 -13.4 -4.2828 | overlap 2617625 GGTCATCGACGAAAA GCTGACCGCTCGGAGCG-GACACCAG AAG CTGGTGTGGCCCGCCG-GCGGGCAGC GCCTGCAACGTCAAC Caul_2404 2620696 - 2618000 - | Beta-glucosidase Caul_2405 2622915 - 2620747 - | hypothetical protein TERM 1741 2622829 - 2622859 + g 70 -12.4 -3.37344 | CAAGGCGCGCGCGGC GGCCCCTCCGCGCG CGG TGCGCGACGGGGTC TTGGTTCCATCGGCG Caul_2406 2624456 - 2622912 - | tryptophan halogenase TERM 1742 2624513 - 2624472 - R 93 -16.6 -3.81488 | overlap 2624474 TGGTCTCAAACAGAA GATCGGCTGGGAAGGTCG GGCGGT CGACCCTCCCAGCCGAAG GGGGAAGGGGACTAG TERM 1743 2624511 - 2624474 - R 100 -23.6 -3.49232 | overlap 2624472 GTCTCAAACAGAAGA TCGGCTGGGAAGGTCG GGCGGT CGACCCTCCCAGCCGA AGGGGGAAGGGGACT Caul_2407 2627479 - 2624525 - | TonB-dependent receptor TERM 1744 2627314 - 2627331 + g 78 -12.7 -3.69395 | overlap 2627306 CGCCGGTTGGCGCGG CGACGGC CGCG GCCGTCG TTATTGGCTCCTCGG TERM 1745 2627758 - 2627740 - H 71 -5.2 -4.45544 | overlap 2627742 2627743 CTTGATCAATGAAAA CAGCGC CCGGTCC GCGCCG ACCGCGCCAAACGAG Caul_2408 2627783 - 2628460 + | SapC family protein TERM 1746 2629348 - 2629330 - g 71 -11.6 -3.61398 | opp_overlap 2629331, overlap 2629331 CGTCCCTTGGAAGAA CGGCGCGC GTG GCGCGCCT TCTTCGACCACTACG TERM 1747 2629331 - 2629347 + G 83 -15.1 -3.62046 | opp_overlap 2629330 2629331 GTCCCTTGGAAGAAC GGCGCGC GTG GCGCGCC TTCTTCGACCACTAC TERM 1748 2629347 - 2629331 - g 70 -15.1 -2.76696 | opp_overlap 2629331, overlap 2629330 GTCCCTTGGAAGAAC GGCGCGC GTG GCGCGCC TTCTTCGACCACTAC Caul_2409 2628457 - 2629491 + | hypothetical protein Caul_2410 2631601 - 2629526 - | Alpha-N-arabinofuranosidase TERM 1749 2630366 - 2630387 + g 78 -5.7 -4.61873 | GGTGCCGAACTTCGG CGCGACGCT CTCG ATCGACGCG TTTTCCTTTGTACCG TERM 1750 2630599 - 2630636 + g 100 -20.5 -3.76373 | GTGGATGGCCATTGG CGGCTCGGCGCGCGCCC CAGG GGGTGCTGGCCGAGCCG TTTAGATATTCCACC Caul_2411 2631861 - 2632967 + | putative esterase TERM 1751 2634699 - 2634715 + G 78 -12.3 -3.80018 | ACTCCGCCGAGGATC GGTCACG GCC CGTGACC TTCTTCGTCTATGGC Caul_2412 2633003 - 2634898 + | Alpha-galactosidase Caul_2413 2634996 - 2636561 + | glycoside hydrolase family protein Caul_2414 2637337 - 2636576 - | GntR domain-containing protein TERM 1752 2636749 - 2636786 + g 82 -16.3 -3.35679 | gap 1, overlap 2636751 TCGTCCAGCTGACCG CTGCGCTGATGCTGGCGC TGA GCGCCATCATC-GCGCTG TTGTGGGTGGCGCGC TERM 1753 2636751 - 2636784 + g 85 -17.5 -3.24924 | gap 1, overlap 2636749 GTCCAGCTGACCGCT GCGCTGATGCTGGCGC TGA GCGCCATCATC-GCGC TGTTGTGGGTGGCGC Caul_2415 2639065 - 2637476 - | Alpha-N-arabinofuranosidase Caul_2416 2639352 - 2640575 + | hypothetical protein Caul_2417 2640575 - 2641696 + | glycosyl transferase group 1 Caul_2418 2641704 - 2642681 + | acid phosphatase Caul_2419 2643343 - 2642777 - | cytochrome B561 TERM 1754 2643422 - 2643450 + r 95 -20.3 -3.17075 | overlap 2643438 GTCCTGGCGACGCGA CCGCCTCGGCCAG ATG CTGGCCGAGGCGC TTGAATTACCGGCCG Caul_2420 2643923 - 2643456 - | rubrerythrin TERM 1755 2644026 - 2643988 - H 83 -9.7 -4.25104 | gap 1, opp_overlap 2643988 GCGGCCTGACGAAAA CCTGACAGACCC-GCT GATCCGAA AGCCAGGTCCGTCAGG TTTTCGTCAGGCGGC Caul_2421 2644097 - 2644375 + | hypothetical protein Caul_2422 2644382 - 2644996 + | cytochrome B561 TERM 1756 2645688 - 2645642 - gf 91 -19.3 -3.05816 | CTACGCGTTATTGAA CGCGCCGAGCACGGCTCCCGC GCATG GCTGAGGCCGCACCCGGCGCG GCGCGTCGACAAAGT Caul_2423 2644968 - 2645672 + | two component transcriptional regulator TERM 1757 2646991 - 2646978 - g 75 -9.5 -4.09685 | opp_overlap 2646976 2646988 CGTGACTGCCCAAAA CGCCG ACGG CGGCG GCGCGCTCTTTACCT Caul_2424 2645665 - 2647089 + | integral membrane sensor signal transduction histidine kinase Caul_2425 2647086 - 2647781 + | hypothetical protein Caul_2426 2650224 - 2647810 - | TonB-dependent receptor plug TERM 1758 2650252 - 2650230 - R 76 -9.8 -3.90588 | CAGCTCGCAATGAAA CGCCCTCCGA CTT TCAGACGGCG TTACCGTAGTTCGAT Caul_2427 2651227 - 2650253 - | anti-FecI sigma factor, FecR Caul_2428 2651939 - 2651328 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1759 2651586 - 2651623 + g 88 -15.5 -3.77831 | gap 1 GGCGCTAGGGCCGCC GGCGC-CGCGCCACTGGG CGT CCCGCTGGCCCGCGCGCC TTTGGGTCTTGATCC Caul_2429 2652028 - 2652750 + | hypothetical protein TERM 1760 2654157 - 2654135 - g 71 -10.4 -3.75105 | opp_overlap 2654136, overlap 2654132 2654136 CGAACTCACCAACAA CGGCCGCCCG CGT CGGGCGGTCC TGCTGTCGCGTCACC Caul_2430 2652747 - 2654198 + | AMP-dependent synthetase and ligase Caul_2431 2654211 - 2654873 + | hypothetical protein Caul_2432 2654866 - 2655618 + | short-chain dehydrogenase/reductase SDR Caul_2433 2655638 - 2656297 + | hypothetical protein TERM 1761 2656354 - 2656377 + F 75 -11.6 -3.56325 | overlap 2656351 GCGCATCTTTCAGGC GTGCGGCGGC GCTC GCTGCCGCCC TTGTGCTTGTCGCCG TERM 1762 2656603 - 2656629 + G 83 -12.2 -4.08216 | overlap 2656604 GCTGGGCCGTCGCGC TGGTGGCGGCGA TGG TCGCGGCCGCCG TTTTCGCGCCCATCC Caul_2434 2656431 - 2657153 + | phosphoesterase PA-phosphatase related TERM 1763 2658767 - 2658718 - g 84 -16.4 -3.4252 | gap 2 GGTTACCCAGCAGAA CGCCGCGATGGTCGAGCAGGCCAC CGCC GCGGCC-GC-CAACCTGCGCGGCG AGGCCGGTCAACTGC Caul_2435 2657357 - 2658880 + | methyl-accepting chemotaxis sensory transducer Caul_2436 2659310 - 2659035 - | hypothetical protein TERM 1764 2659362 - 2659375 + H 71 -5.3 -4.4017 | GGTCGGCATTTGGCT TTGAC CCAA GTCAA TTTTCTCAAGCTTCG Caul_2437 2659428 - 2661071 + | cytochrome c oxidase, cbb3-type, subunit I Caul_2438 2661082 - 2661825 + | cytochrome c oxidase, cbb3-type, subunit II Caul_2439 2661830 - 2661988 + | Cbb3-type cytochrome oxidase component Caul_2440 2661988 - 2662854 + | cytochrome c oxidase, cbb3-type, subunit III TERM 1765 2662943 - 2662886 - g 90 -17.4 -3.42459 | opp_overlap 2662894, overlap 2662882 2662883 GATCGACAACACCAA GCCCAAGCCCGACGCGCGGTCGGCGG TTTCCG CCGCCGCCCGCGCCAAGGGACGGGGC GACGCCAAGGGCGGC TERM 1766 2663125 - 2663135 + G 72 -8.2 -3.97444 | CCCTGGTCGATTTCA CCGG CCG CCGG TTCTATTTCTTCGAT TERM 1767 2663700 - 2663682 - g 72 -5.8 -4.30719 | opp_overlap 2663685, overlap 2663683 2663684 GGGGCCCACAAGAAA GGCCAGCC CTG GGAGGGCC GGGGCGATTGCATCG Caul_2441 2662860 - 2664365 + | cytochrome c oxidase accessory protein CcoG Caul_2442 2664362 - 2664844 + | FixH family protein TERM 1768 2665179 - 2665234 + G 70 -12.6 -3.34398 | gap 2, overlap 2665143 2665178 CACCGCCCTGGGGGT GGCCGGCTTCGGCGCGGGCAATGTGA TGATGT TCACGGTGCCCGC-CTG-GGCCGGGC TGTTTGGCCAGGAAC TERM 1769 2666048 - 2666089 + G 100 -18.7 -4.07568 | GTCCCTGCGCGCTAG GTCTGGCGGTGCCGGCGGT GCAG ATCGCCGCCAGCGCCAGGC TTTTCCGCAAGGGCG Caul_2443 2664841 - 2667006 + | heavy metal translocating P-type ATPase TERM 1770 2667045 - 2667065 + G 90 -13.9 -4.0371 | TGTTCGCTGGCGCTG GGCGCCCTG GGC CTGGGCGCC TTTCTGTGGACCATG Caul_2444 2667003 - 2667167 + | cytochrome oxidase maturation protein, cbb3-type TERM 1771 2667311 - 2667284 - f 77 -2.7 -5.07652 | gap 1, overlap 2667287 TCCCCTAAAAGAAAA GAACGCAGCCGC TACTG ACGG-TGCGTTG CGATGGAATGGGGAT TERM 1772 2667308 - 2667287 - f 72 -4.4 -4.6313 | gap 1, overlap 2667284 CCTAAAAGAAAAGAA CGCAGCCGC TACTG ACGG-TGCG TTGCGATGGAATGGG TERM 1773 2667821 - 2667772 - g 70 -8.6 -3.8917 | CGGCAAGGACAAGAA CGGCTT-CAAGGTGAAGCTCGACG ACGG CTTCG-GCTACGCCCTGCAAGCCG GCGTGGACGTGGCGG Caul_2445 2667332 - 2667976 + | OmpW family protein TERM 1774 2668003 - 2668017 + F 78 -3.4 -5.07652 | overlap 2667975 2667974 ACCTGATTGCATCAG GCCGGG GTC CTAGGC TTTTGTTTTAACGCA TERM 1775 2668094 - 2668139 + F 81 -16.7 -2.78547 | gap 1, opp_overlap 2668072 2668071, overlap 2668089 GCGCCGAGTTCCAGG CGTCGCCGAGAGCGGACGCGGC CTG GCCGCGTCCGCCGACGG-GTCG TGGTTGGTCAGGTCA TERM 1776 2668773 - 2668801 + G 74 -15.9 -2.78384 | GGCGATGAGCGGGTC GCCGCCGCCGCCG CCG TGGCGGTCGCGGC TCTACTGGCGGGCAA TERM 1777 2669048 - 2669072 + G 74 -15 -3.01924 | overlap 2669045 2669050 2669069 GCGTGGCGCCTTGCT GGCCAGCGCG GCTGG CGCGCTGGTC TCTTCGACGGCGGTG Caul_2446 2668431 - 2669681 + | hypothetical protein TERM 1778 2669883 - 2669933 + G 83 -14.5 -3.54543 | gap 1, opp_overlap 2669882 2669879 TCTTGGATGAAGCAG CTTGGCCGG-ACCGATGCGCCGCC ACCC GGCGTCGCCGCGGAACCGGCCGGG TTTCCAAAAGTGCGT TERM 1779 2670345 - 2670372 + G 76 -14.1 -3.51934 | overlap 2670343 TTGCTGGAGGCCGTC GGCGCGGCCCA CCTCGC TGGGCGGCGCC TCTTTGTCGCCACCG Caul_2447 2669859 - 2670986 + | patatin TERM 1780 2671114 - 2671134 + F 86 -16.1 -3.23216 | opp_overlap 2671109 AGGCGGAAGATGGCC GGCGCGCCT GCC GGGCGCGCC TTCATCCTGATGGAG Caul_2448 2671158 - 2671286 + | hypothetical protein TERM 1781 2671980 - 2672029 + G 73 -16.3 -2.62184 | gap 1 CCTGTTCGCGCCGAT CGGCG-CGCTCGTGCCGCTCGCCT TGC GGGCGGTCCGCAAGGGCGGCGCCG TGGTGTGCGCGGGAA Caul_2449 2671288 - 2672283 + | zinc-binding alcohol dehydrogenase family protein Caul_2450 2672988 - 2672389 - | NAD(P)H dehydrogenase (quinone) Caul_2451 2673115 - 2673561 + | hypothetical protein Caul_2452 2673640 - 2675283 + | beta-lactamase domain-containing protein Caul_2453 2675360 - 2675689 + | hypothetical protein TERM 1782 2675689 - 2675704 + F 76 -10.4 -3.83026 | overlap 2675684 CGCCCGCGACGCATA GGGAGC CCAG GCTCCC TTTGATGTGGCCGAA TERM 1783 2675778 - 2675828 + F 81 -15.3 -3.01712 | gap 1, opp_overlap 2675759 CCCTGACGGGGGAAT CCGCGCCGGTCCAG-CGCGCGCCG GGAT CGGCGGGCGGTTCCACCGGCGCGA TCTTCGCCGGCACGC Caul_2454 2675981 - 2676856 + | UspA domain-containing protein Caul_2455 2677374 - 2676886 - | NUDIX hydrolase Caul_2456 2677941 - 2677426 - | pyridoxamine 5'-phosphate oxidase-related FMN-binding Caul_2457 2678596 - 2677982 - | Crp/FNR family transcriptional regulator Caul_2458 2681453 - 2678772 - | CoA-binding domain-containing protein Caul_2459 2681543 - 2681767 + | response regulator receiver protein Caul_2460 2681849 - 2682244 + | response regulator receiver protein TERM 1784 2683085 - 2683052 - g 83 -12.3 -3.99678 | overlap 2683053 ACCTGCAGAAGGAAA TCGGCGGCGCCCAAG GCGT CCTGGTCACCGCCGT GTCGCCCATCGCCTT TERM 1785 2683084 - 2683053 - g 78 -15.8 -2.99325 | overlap 2683052 CCTGCAGAAGGAAAT CGGCGGCGCCCAAG GCGT CCTGGTCACCGCCG TGTCGCCCATCGCCT Caul_2461 2682358 - 2683392 + | alcohol dehydrogenase Caul_2462 2683404 - 2683808 + | cytochrome c class I Caul_2463 2683943 - 2684098 + | hypothetical protein Caul_2464 2684269 - 2684826 + | hypothetical protein TERM 1786 2685415 - 2685425 + G 72 -8.2 -3.96148 | TCGACGCCAAGGGTT GCCG GAT CGGC TTTGTCGTGGCCGCC Caul_2465 2685219 - 2685506 + | hypothetical protein Caul_2466 2686006 - 2685590 - | cytochrome c class I Caul_2467 2686443 - 2686003 - | hypothetical protein TERM 1787 2686930 - 2686907 - g 75 -8.8 -4.13767 | gap 1, overlap 2686908 TCGCCTATTTGAAAA GC-CTGGAGCC AGA GGCTCCGGTGC GGGCTCCCCAGCCGT Caul_2468 2686567 - 2686947 + | cytochrome c class I Caul_2469 2687838 - 2687077 - | hypothetical protein Caul_2470 2688785 - 2687838 - | beta-lactamase domain-containing protein Caul_2471 2688861 - 2689634 + | hypothetical protein Caul_2472 2690009 - 2689650 - | ArsR family transcriptional regulator Caul_2473 2693230 - 2690030 - | acriflavin resistance protein Caul_2474 2694261 - 2693227 - | RND family efflux transporter MFP subunit Caul_2475 2694624 - 2694298 - | rhodanese domain-containing protein Caul_2476 2694956 - 2694624 - | ArsR family transcriptional regulator Caul_2477 2695076 - 2696356 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Caul_2478 2696373 - 2696834 + | thioredoxin domain-containing protein Caul_2479 2696837 - 2697040 + | hypothetical protein TERM 1788 2697079 - 2697046 - T 81 -16 -2.82516 | gap 1, opp_overlap 2697036 GTTCCGATGACCACA CGGCGCGCGCTGTCC CTGTT GGCCAGCGC-CGCCG CCTAGACCCCTTTCG Caul_2480 2698133 - 2697081 - | histidine kinase TERM 1789 2697900 - 2697878 - G 72 -9.1 -4.07568 | gap 1 CTTCGCCGGCCAAAA GGCC-CCGCA GACC CGCGGCGGCC TCGGCGGCGCCCCGA Caul_2481 2698618 - 2698178 - | peptidase M15A TERM 1790 2698416 - 2698371 - G 78 -8.2 -4.3586 | gap 2, overlap 2698347 CCATCGACATGAAAA TCGGCGGCATG--GCCCAGGGC GTGG GCCGAGGTCGGCACGCCGCCGA CCGCGGCGTTGACCT TERM 1791 2699086 - 2699122 + G 73 -12.9 -3.53343 | overlap 2699087 GCAATAATCCTCATG TCCTGCAGGGCGGCGAG GGC CTTGACGCCCTGAAGGC TTTCCAGCGAGACTT TERM 1792 2699087 - 2699121 + G 74 -16.4 -2.71791 | overlap 2699086 CAATAATCCTCATGT CCTGCAGGGCGGCGAG GGC CTTGACGCCCTGAAGG CTTTCCAGCGAGACT Caul_2482 2698770 - 2699339 + | 2'-5' RNA ligase TERM 1793 2699432 - 2699454 + T 100 -17 -4.78572 | CTTGATTTGAACTTG CCCCGGAGCG CGC TGCTCCGGGG TTTTCTTCATTCAGA Caul_2483 2700877 - 2699465 - | transcriptional regulator TERM 1794 2700735 - 2700753 + g 74 -12.4 -3.53811 | overlap 2700736 TCACCGGGCTGCAAC TCGCCGTC GCG GACGGCGG TTTCAAGAGCATCGA Caul_2484 2700913 - 2701311 + | hypothetical protein Caul_2485 2702132 - 2701395 - | protein of unknown function DUF899 thioredoxin family protein TERM 1795 2702018 - 2702053 + g 100 -13.2 -4.46669 | gap 1 TGACCCACGGCAGGG CCATGC-GCGCGGCGGC GTT GCGGTCGCGCAGCTTGG TTTCTTCCTTTTCCT Caul_2486 2702209 - 2702655 + | MarR family transcriptional regulator Caul_2487 2702773 - 2703129 + | arsenate reductase and related Caul_2488 2703130 - 2703789 + | HAD family hydrolase TERM 1796 2703819 - 2703800 - f 74 -9.2 -3.87075 | ACTAGTCTTCAGAAA CGGCGCGA AGGA TCGCGTCG ATCTGGAGATGAGAT Caul_2489 2703833 - 2704024 + | hypothetical protein TERM 1797 2704048 - 2704032 - f 76 -13.7 -3.1355 | CTCACTGACACTCAA GGCGCGT CGG ACGCGCC CCTGGAGACAAGACC Caul_2490 2704064 - 2704489 + | hypothetical protein Caul_2491 2704489 - 2705004 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1798 2705128 - 2705166 + G 73 -15.9 -2.62983 | AGTTGGGCGTGAAGC TGGTCTCGGCGGCCGCG ACCGC CGTGGCCGCCGGCGCCG TGCTCTGGGCCTGCG Caul_2492 2705001 - 2705300 + | hypothetical protein TERM 1799 2705445 - 2705423 - f 76 -12.6 -3.51924 | CTCTTACCTACAGAA GGCGAAGGCG AGA CGCCGCCGCC AAGCAATTCGAGGGG Caul_2493 2705469 - 2705861 + | hypothetical protein Caul_2494 2705893 - 2706480 + | ECF subfamily RNA polymerase sigma-24 factor Caul_2495 2706932 - 2707768 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1800 2707812 - 2707762 - f 75 -11.8 -3.66018 | gap 2 CTACTACGCCAAGAA GGGCTAGGACCGGCCGGCAGGACC TTAGG GGGCCTGGCG-CCGGTTCC-GCCC CGTTGCGGCTGATCC TERM 1801 2708149 - 2708119 - g 77 -11 -3.93148 | opp_overlap 2708120, overlap 2708112 2708120 GAACCAAACCAACAA GGCCAGCGAGGCCT ATC AGGCGGCGCTGGTC AGCGCCGGCAAGATC Caul_2496 2707955 - 2708719 + | TPR repeat-containing protein Caul_2497 2708716 - 2710143 + | Pyrrolo-quinoline quinone TERM 1802 2710180 - 2710220 + F 100 -16.2 -4.4648 | gap 1, opp_overlap 2710178 2710172 2710181, overlap 2710181 2710183 2710187 ACCAAAATTCAAACC ACG-CGAACCCGGGTTGGC CCTA GCCAGCCCGGGTTTGTCGC TTTTGTCCTCGAAAT TERM 1803 2710219 - 2710181 - f 81 -15.3 -3.02204 | gap 1, opp_overlap 2710180 2710181 2710183 2710187, overlap 2710178 2710172 CCAAAATTCAAACCA CG-CGAACCCGGGTTGGC CCTA GCCAGCCCGGGTTTGTCG CTTTTGTCCTCGAAA TERM 1804 2710181 - 2710219 + F 95 -19.7 -3.27406 | gap 1, opp_overlap 2710181 2710178 2710172, overlap 2710180 2710183 2710187 CCAAAATTCAAACCA CG-CGAACCCGGGTTGGC CCTA GCCAGCCCGGGTTTGTCG CTTTTGTCCTCGAAA TERM 1805 2710183 - 2710216 + F 91 -21.1 -2.81535 | opp_overlap 2710181 2710178 2710172, overlap 2710181 2710180 2710187 AAAATTCAAACCACG CGAACCCGGGTTGGC CCTA GCCAGCCCGGGTTTG TCGCTTTTGTCCTCG TERM 1806 2710187 - 2710212 + F 100 -18.3 -4.07786 | opp_overlap 2710181 2710178 2710172, overlap 2710183 2710181 2710180 TTCAAACCACGCGAA CCCGGGTTGGC CCTA GCCAGCCCGGG TTTGTCGCTTTTGTC TERM 1807 2710478 - 2710451 - g 74 -11.2 -3.76402 | ATGTCACCGACGAAA GCCTGGAAGCGC GGAT GCGCGCCCAGAC CGAGTTGGCGATCGA TERM 1808 2710657 - 2710623 - g 72 -13.4 -3.18199 | overlap 2710611 CAAGTCCGAAGGCAA GGCCGGCGACCACGGC GCG GCCGAGGCCAACAGCC TGGGCCTGGGCGAGC TERM 1809 2712019 - 2712000 - g 71 -11.4 -3.66178 | gap 1 GTCGTCAACGCCAAA GCG-GCCGG TGG CCGGCGCGC GCACCGTTCGGGGCA Caul_2498 2710252 - 2712060 + | GTP-binding protein EngA Caul_2499 2712959 - 2712057 - | thioredoxin-disulfide reductase Caul_2500 2713844 - 2713092 - | short-chain dehydrogenase/reductase SDR Caul_2501 2714860 - 2713886 - | bile acid:sodium symporter Caul_2502 2716510 - 2715008 - | amidophosphoribosyltransferase Caul_2503 2717130 - 2716507 - | colicin V production protein TERM 1810 2716598 - 2716638 + g 90 -13.4 -4.07568 | TCGGACGGTTTGTCG CTGGCG-CCGTCATGGACGG CGT CC-TCAATGGCGGGCGCCAG TTTTCCGGCCAGGCC Caul_2504 2718509 - 2717127 - | DNA repair protein RadA TERM 1811 2717862 - 2717891 + g 88 -11.3 -4.44667 | overlap 2717864 2717879 CTGGCCGTCCTTGGT GACGTGGCCGACC AGCA GGATGGCCACGCC TTTCTTCTTGGCCAG Caul_2505 2718682 - 2719869 + | hypothetical protein Caul_2506 2721024 - 2719942 - | alanine racemase Caul_2507 2721774 - 2721091 - | multiple antibiotic resistance (MarC)-related protein Caul_2508 2723358 - 2721877 - | replicative DNA helicase TERM 1812 2723545 - 2723522 - R 100 -19.6 -4.19817 | opp_overlap 2723522 CGGACGTAGGCAAAA GGCGCGGGGA TCGC TCCCCGCGCC TTGTCCAGCTTGACC TERM 1813 2723522 - 2723545 + r 95 -19.6 -3.33261 | opp_overlap 2723522 CGGACGTAGGCAAAA GGCGCGGGGA TCGC TCCCCGCGCC TTGTCCAGCTTGACC Caul_2509 2725982 - 2723571 - | TonB-dependent receptor TERM 1814 2726011 - 2726022 + r 76 -7.2 -4.25104 | CGCTTGTCTCCCGGG GGCG TTGA CGCC TTTTGGTCCGGAAGC TERM 1815 2726117 - 2726157 + r 100 -12 -4.66609 | gap 1, opp_overlap 2726127, overlap 2726121 2726124 2726127 TTCTAGATCATGGCG CAGAAAAAAACGGCGCGGA TTTC TCCGCGCCGTTCTTCT-TG TTTTTCAGTGCGCTA TERM 1816 2726121 - 2726154 + r 100 -13.9 -4.44608 | opp_overlap 2726127, overlap 2726117 2726124 2726127 AGATCATGGCGCAGA AAAAAACGGCGCGGA TTTC TCCGCGCCGTTCTTC TTGTTTTTCAGTGCG TERM 1817 2726124 - 2726151 + r 100 -15.6 -4.32491 | opp_overlap 2726127, overlap 2726121 2726117 2726127 TCATGGCGCAGAAAA AAACGGCGCGGA TTTC TCCGCGCCGTTC TTCTTGTTTTTCAGT TERM 1818 2726127 - 2726148 + r 100 -17.3 -4.24569 | opp_overlap 2726127, overlap 2726124 2726121 2726117 TGGCGCAGAAAAAAA CGGCGCGGA TTTC TCCGCGCCG TTCTTCTTGTTTTTC TERM 1819 2726148 - 2726127 - R 100 -17.3 -5.60993 | opp_overlap 2726124 2726121 2726117 2726127 TGGCGCAGAAAAAAA CGGCGCGGA TTTC TCCGCGCCG TTCTTCTTGTTTTTC Caul_2510 2726765 - 2726181 - | 50S ribosomal protein L9 TERM 1820 2726223 - 2726264 + g 71 -10.7 -3.63515 | gap 1, opp_overlap 2726212, overlap 2726221 CGAACCGGCGCCGCC GGCCGCCATGTCCGAAGCCG CTT CGGCCTCGGCCGCG-CGGTC TTCTTCGAACTGAGC Caul_2511 2727057 - 2726779 - | 30S ribosomal protein S18 TERM 1821 2727031 - 2726992 - G 71 -11.2 -3.67597 | gap 1 GCGGCGACGGAAGAA CGG-GCGGCGGGCGCCGCC AGC GGCGGCGGCGGGAGCGCCG GCTTCGGGAGCAGTG Caul_2512 2727453 - 2727073 - | ribosomal protein S6 TERM 1822 2727339 - 2727355 + g 78 -6.5 -4.63218 | CCCAGTATTCGATCT TGGCGAT GTG ACCGCCA TTTTCTTCCAGGAGA TERM 1823 2727753 - 2727725 - g 90 -13.2 -4.07562 | opp_overlap 2727722 2727734 TAAATGTCATACAAA TTCCGCGGCCAA GCTCT TTGGCCGCGCAA GGGCTTGTGCTATCC TERM 1824 2728073 - 2728042 - g 100 -23.8 -3.41527 | GAAGCCCGACGACAA CGCCCAGGCCAACC GCAC GGTCGGCCTGGGCG CGTCGTGGAACGCCC Caul_2513 2727713 - 2728432 + | hypothetical protein Caul_2514 2729239 - 2728436 - | fatty acid hydroxylase TERM 1825 2729274 - 2729245 - R 73 -10.7 -3.6608 | ACGACGGCATTGAAA CTTCCTCGGATGG ATGA CGGTCCGAGGAAG GGCGCCGGGCGCGGC Caul_2515 2730432 - 2729311 - | AraC family transcriptional regulator TERM 1826 2730347 - 2730313 - G 73 -9.9 -3.96068 | gap 1, overlap 2730314 GCAGGCGAAGAACAA TCCGCCGACCCAGCGC ACGG GCG-TGGGCCGCCGGT CCATCACCAGGGCCA Caul_2516 2731074 - 2730523 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1827 2730972 - 2730946 - G 75 -5.6 -4.55798 | overlap 2730948 CAGGCTAAAGGAAAA GTCCTTGCCGCC CAG AGCGGCGGGGGC GGTGAAGTCGGGGGC Caul_2517 2731302 - 2732246 + | malonyl CoA-acyl carrier protein transacylase TERM 1828 2732254 - 2732312 + F 74 -13.2 -3.35073 | gap 2, overlap 2732254 2732263 2732284 CGCTGTAGCTTTCAT C-GCCGCGG-GTCGGCCCTCGTCCTTCG ACAGG CTCAGGATGAGGGCTGATTTCGCGGCGG TTCATTCGAGATCCT TERM 1829 2732254 - 2732311 + F 87 -19.2 -2.60723 | gap 1, overlap 2732254 2732263 2732284 CGCTGTAGCTTTCAT CGCCGCGG-GTCGGCCCTCGTCCTTCG ACAGG CTCAGGATGAGGGCTGATTTCGCGGCG GTTCATTCGAGATCC TERM 1830 2732263 - 2732301 + F 75 -11.7 -3.54459 | overlap 2732254 2732254 2732284 TTTCATCGCCGCGGG TCGGCCCTCGTCCTTCG ACAGG CTCAGGATGAGGGCTGA TTTCGCGGCGGTTCA Caul_2518 2732390 - 2733130 + | 3-oxoacyl-(acyl-carrier-protein) reductase TERM 1831 2733331 - 2733317 - f 76 -7.2 -4.29396 | AACGAGGGACTAAAA GAATGT CCG ACATTC TCGAGCGCGTGCGTA Caul_2519 2733319 - 2733558 + | acyl carrier protein TERM 1832 2733598 - 2733638 + F 100 -17.7 -4.39166 | gap 3, opp_overlap 2733598 GAACAGGACTATCAA CCGCCGCGTCGCACG--GGC TCTT GCCATCGTGCG-CGCGGCGG TTTTCGTATGTGGCC TERM 1833 2733638 - 2733598 - f 91 -17.7 -3.24902 | gap 3, opp_overlap 2733598 GAACAGGACTATCAA CCGCCGCGTCGCACG--GGC TCTT GCCATCGTGCG-CGCGGCGG TTTTCGTATGTGGCC TERM 1834 2734428 - 2734458 + G 71 -10.5 -3.78775 | gap 1, opp_overlap 2734416 2734426 2734427, overlap 2734428 ACACGCCTGAAAAGG CC-TCGCGTCCC TACGACGC GGGACGCGACGG TTTCGTGATGGGCGA Caul_2520 2733731 - 2735011 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1835 2735077 - 2735038 - g 100 -17 -4.15044 | CCTCCCGCCAATAAA GGGGCGCCGTCCAGGGCG CCGT CGCCCCGCAAGGCGCCTC GCAAGCCGAGCCCAC Caul_2521 2735008 - 2736126 + | aminodeoxychorismate lyase Caul_2522 2736128 - 2737009 + | hypothetical protein Caul_2523 2736999 - 2737643 + | guanylate kinase Caul_2524 2737685 - 2737960 + | hypothetical protein Caul_2525 2739102 - 2738236 - | dimethyladenosine transferase Caul_2526 2740228 - 2739224 - | 4-hydroxythreonine-4-phosphate dehydrogenase Caul_2527 2741583 - 2740225 - | SurA domain-containing protein Caul_2528 2744110 - 2741660 - | organic solvent tolerance protein TERM 1836 2743532 - 2743568 + g 79 -10.7 -4.07568 | GTTCTTGTCCTGCAC GACCTTGTCGGCCTGGA TGC TCCAGGTCGGCTTGGGC TTTTCGGCGCAAACC Caul_2529 2745242 - 2744139 - | permease YjgP/YjgQ family protein TERM 1837 2744938 - 2744897 - G 75 -9.3 -4.11216 | overlap 2744910 2744937 GGGTCAGGGTCAAAA GGCCCATCACGAAGGCGGC GACG GCGGCCGGCATGATGAACC GCCAGGCCGACACCC Caul_2530 2746375 - 2745239 - | permease YjgP/YjgQ family protein TERM 1838 2746496 - 2746484 - H 76 -6.2 -4.62069 | GTCGGACCGGAAAAA GGCG CTCGC CGCC AGGTCGTTCGATTGG TERM 1839 2747826 - 2747794 - g 75 -5.3 -4.56597 | overlap 2747796 GGCTTGTCGGAAAAA CTTCTCGCGGCGGGC AGG GCCGAGCGCGAGCCG CTGTGGCGCATGCCG Caul_2531 2746612 - 2748093 + | leucyl aminopeptidase Caul_2532 2748096 - 2748557 + | DNA polymerase III subunit chi Caul_2533 2748554 - 2748910 + | hypothetical protein TERM 1840 2749001 - 2748971 - T 70 -11.8 -3.15503 | gap 1, opp_overlap 2748996, overlap 2748969 CTTCAAGACCCAATA GCCCG-CCGGTCC GGTCGG GGGCCGGGCGGGC GGCTCAGTGAGCGTG Caul_2534 2749646 - 2749005 - | hypothetical protein Caul_2535 2750119 - 2749715 - | hypothetical protein TERM 1841 2750070 - 2750103 + g 82 -5.9 -4.7373 | opp_overlap 2750043 GAGGCGGCCGACAGG CCTTCCGGGTTGGCG ACGA TGTGATTCCGGAAGG TTTTTCCTGAAGTCA Caul_2536 2750341 - 2750928 + | hypothetical protein Caul_2537 2752808 - 2750925 - | ABC transporter related Caul_2538 2752910 - 2753329 + | nucleoside-diphosphate kinase TERM 1842 2753380 - 2753357 - T 93 -19.6 -3.06492 | opp_overlap 2753357 TTATCGACGGCAAGA GGCCGGCGGA TCGC TCCGCCGGCC TTTTCCTTGGGCGGA TERM 1843 2753357 - 2753380 + T 100 -19.6 -4.4078 | opp_overlap 2753357 TTATCGACGGCAAGA GGCCGGCGGA TCGC TCCGCCGGCC TTTTCCTTGGGCGGA Caul_2539 2755063 - 2753399 - | integral membrane sensor signal transduction histidine kinase TERM 1844 2754587 - 2754601 + g 74 -12.8 -3.55622 | TTCGAGGTTCAGCCG GCCCGC GGC GCGGGC TTTCGCGGCCTTGGC TERM 1845 2754706 - 2754740 + g 74 -16.4 -2.73364 | opp_overlap 2754709 CCTGCGACGCGTAGA CGACCTGGCCGTCGCG CAT CGCGAAGCTCAGGTCG TGATTGAAATAGCGG TERM 1846 2755287 - 2755252 - g 71 -9.6 -3.7941 | opp_overlap 2755252 2755253, overlap 2755239 2755253 CACCGGCGACAACAA TCGCGGCCGAGGCC TCGCGGCT GACCTGGGCCGCGG AGGTCGGCGCGGTTT Caul_2540 2755197 - 2755880 + | hypothetical protein Caul_2541 2755946 - 2756590 + | hypothetical protein Caul_2542 2757813 - 2756596 - | membrane dipeptidase Caul_2543 2760260 - 2757870 - | TonB-dependent receptor TERM 1847 2760820 - 2760855 + r 70 -7.3 -4.08767 | CGACTTCGCGGCTTG GCGCCAGGCGCCGCG ATCAGG CGCAGCGACCGCCGC TTTTCCCGGCGTCCC Caul_2544 2761488 - 2760907 - | phosphoribosylglycinamide formyltransferase Caul_2545 2762676 - 2761651 - | phosphoribosylaminoimidazole synthetase TERM 1848 2761696 - 2761681 - G 72 -3.2 -4.55295 | CTGCCCACAAACAAA CGCG TCCTCGCC CGCG TTCAGCAGCGCCGCC TERM 1849 2762810 - 2762825 + G 71 -11.8 -3.56161 | GACGATCACCACTAC CGCCGC GCTG GCGGCG TTCTGTAATGAGTTG Caul_2546 2762790 - 2763959 + | ribonuclease D Caul_2547 2766059 - 2763963 - | histidine kinase TERM 1850 2766231 - 2766206 - R 100 -18.3 -5.06816 | opp_overlap 2766204 2766203 2766201 AGCGCGCAAGAAAAA GGGCCGGCTCC TTTC GGAACCGGCCC CCATCTTTCGGCAGT Caul_2548 2769261 - 2766256 - | TonB-dependent receptor TERM 1851 2766527 - 2766558 + g 71 -10.2 -3.72576 | gap 1, overlap 2766522 TTGCCCTTCGGGCAG TCGGT-GCTGCCG TTGGTGT CGGCGGCGACCGA TTTGATCGAACCCAC TERM 1852 2768074 - 2768122 + g 77 -15.7 -3.21747 | GCTGGACGCCAGCGA GGGCGCGCCGCCGAAGGGCTGAG TGG CGCGGACCGCCGTTGGCGCGCCC TTGATGCTGACGTAG Caul_2549 2771221 - 2769734 - | Ppx/GppA phosphatase TERM 1853 2770841 - 2770871 + g 77 -14.7 -3.13403 | gap 1, overlap 2770839 GGCGTCCGGGGTCCC GGCCAGC-ACGCCG ACGG CGGCGTAGCGGGCC TCTTCCTCGCCCGAC Caul_2550 2771779 - 2771318 - | hypothetical protein Caul_2551 2774004 - 2771776 - | polyphosphate kinase TERM 1854 2774234 - 2774188 - R 73 -13.1 -3.19371 | gap 2 ACGTAGCGAAGCGAA GATCCGGGACCGACGCGTGAACT CAG AGCTTCCG-G-CGGTCCCGGATC GGCGGCCCTTCGGGC Caul_2552 2775012 - 2774311 - | DnaA-related protein Caul_2553 2775767 - 2775138 - | hypothetical protein Caul_2554 2776866 - 2775760 - | hypothetical protein TERM 1855 2777691 - 2777713 + G 82 -13.4 -3.71649 | overlap 2777692 AGGGCGGCGCCTTGA ACCCTCTCCC AGC GGGAGAGGGG TTTGGCGTTTAGGGG TERM 1856 2777692 - 2777712 + G 75 -16.9 -2.82668 | overlap 2777691 GGGCGGCGCCTTGAA CCCTCTCCC AGC GGGAGAGGG GTTTGGCGTTTAGGG Caul_2555 2776970 - 2777725 + | hypothetical protein Caul_2556 2778407 - 2778066 - | hypothetical protein Caul_2557 2778447 - 2780276 + | aspartyl-tRNA synthetase TERM 1857 2780331 - 2780304 - T 100 -17 -4.72272 | opp_overlap 2780304 GGCCCCTACGAAAAA GCCCTCCGGTCC CGAT GGATCGGAGGGC TTCTTGGTCTGGAGC TERM 1858 2780304 - 2780331 + T 100 -19.2 -3.7732 | opp_overlap 2780304 GGCCCCTACGAAAAA GCCCTCCGGTCC CGAT GGATCGGAGGGC TTCTTGGTCTGGAGC Caul_2558 2781297 - 2780359 - | pentapeptide repeat-containing protein TERM 1859 2781439 - 2781419 - R 76 -8.2 -4.18197 | AGCCGGCACGGAAAA TCCGCGCG GCAGG CGCGTGGA GCCGTCGCCGCAGGC Caul_2559 2781886 - 2781395 - | pentapeptide repeat-containing protein TERM 1860 2781682 - 2781722 + g 90 -16.7 -3.68222 | TGCGGTTCATCTCGG CCAGGCTGAGGTCGGCCTG ACG CAGGCGGGCCCCGGCCAGG TTCTTGCCCTTCAGC Caul_2560 2784712 - 2781956 - | ribonucleotide reductase-related protein TERM 1861 2782483 - 2782499 + g 73 -12.3 -3.39803 | overlap 2782477 TGTTCATCAGGCTTC GGAAGGC GGC GCCTTCC TTGTGCATGTCGATG TERM 1862 2783018 - 2783055 + g 71 -9.7 -3.68351 | gap 1, overlap 2783019 CTCGCAATCCGACAG GCGGCGCGCGCCCAGGGC ATG GCGCTCGGC-CGCGTCGA TTTCGGTCGTCGAGA TERM 1863 2784523 - 2784488 - G 71 -11.6 -3.61398 | GGCGTCGGCGAACAA GCCGTCGGACAGGCCG GCCT CGGCCAGGCGGTCGGC GTAGCGGGCGGGACC Caul_2561 2784944 - 2785354 + | NADH dehydrogenase Caul_2563 2786629 - 2785976 - | leucyl/phenylalanyl-tRNA--protein transferase Caul_2562 2785356 - 2786039 + | hypothetical protein Caul_2564 2788000 - 2786657 - | acetyl-CoA carboxylase biotin carboxylase subunit Caul_2565 2788521 - 2788006 - | acetyl-CoA carboxylase, biotin carboxyl carrier protein Caul_2566 2789007 - 2788564 - | 3-dehydroquinate dehydratase Caul_2567 2789087 - 2789287 + | thiamine biosynthesis protein ThiS Caul_2568 2789334 - 2790140 + | thiazole synthase Caul_2569 2790498 - 2790148 - | hypothetical protein TERM 1864 2790615 - 2790672 + r 72 -3.9 -4.66833 | gap 1, overlap 2790625 2790653 GAGGCAGGGTTGACC GGGC-AGTTTCTTCCGAGGCGGCGGG ATCCGCA CCTGCCGCCTCGGCGTTGCCTAGACC TTTTTCGCGTTCCCC TERM 1865 2790625 - 2790661 + r 81 -15.1 -3.07575 | overlap 2790615 2790653 TGACCGGGCAGTTTC TTCCGAGGCGGCGGG ATCCGCA CCTGCCGCCTCGGCG TTGCCTAGACCTTTT Caul_2570 2791403 - 2790666 - | DSBA oxidoreductase Caul_2571 2792848 - 2791427 - | peptidase M48 Ste24p TERM 1866 2791504 - 2791541 + g 71 -11.3 -3.62046 | gap 1, opp_overlap 2791504 AAGGATTGGAAGTCA GGACGATGTCGG-TGGCG CGG CGCCATTCGACGCTGTCC TTCTTGAGCAACTCG TERM 1867 2792987 - 2792944 - R 90 -18.2 -2.8805 | gap 1 AGCACCCCGGATATA GGCGTGACGGTCGACGGGACC AGG GGTCCCGCCGACCGTCAT-CA AGACCTATCAGCCTC Caul_2572 2795712 - 2792995 - | ribonuclease TERM 1868 2794173 - 2794210 + g 82 -8.3 -4.41494 | opp_overlap 2794173, overlap 2794175 GCACCGTCACGAACA GGGCGTGGGTCTGCTGC AGGC GCAGCAGATAGGCGCGC TTTTCGTTGAGGATA TERM 1869 2795891 - 2795876 - H 74 -11.8 -3.53012 | TCTGTGTTCCTTAAA CGCGCC GGAA GGCGCG GATCGGATGGAGCGT TERM 1870 2796113 - 2796069 - H 82 -14.4 -3.32022 | gap 2, overlap 2796070 TCCGTGAGATAGGAA CCGCTCACGCTTAGCGCCATGA CGA TCACGGCGCTCAGCGC--GCGG ACCATACTGTAGCAA TERM 1871 2796113 - 2796070 - H 74 -14.6 -2.58999 | gap 1, overlap 2796069 CCGTGAGATAGGAAC CGCTCACGCTTAGCGCCATGA CGA TCACGGCGCTCAGCGCGCG-G ACCATACTGTAGCAA TERM 1872 2796165 - 2796149 - H 85 -5.8 -5.07652 | overlap 2796150 2796163 CGTCGTAAAAGAAAA GCGCTC GACGA AAGCGC CGATCGGCTTCATGC TERM 1873 2797105 - 2797080 - g 75 -5.3 -4.56775 | gap 1, opp_overlap 2797085, overlap 2797081 ACCCTGTCGGAAAAA GGCACCGAGCGC GTG GCGCG-GGTGCT TGAGAAAGACGACTG Caul_2573 2796315 - 2797463 + | N-acetylmuramoyl-L-alanine amidase Caul_2574 2797649 - 2800024 + | 1A family penicillin-binding protein Caul_2575 2800122 - 2801225 + | peptide chain release factor 2 Caul_2576 2801535 - 2801233 - | hypothetical protein TERM 1874 2801436 - 2801399 - G 78 -13.3 -3.55444 | TCGGCATGGCTGAAA CTGGCGCGGCCGTCGGC GTGC GCCGACAGGATCGCCAG ATAGGTCAGGAAGGC Caul_2577 2801626 - 2801997 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_2578 2802502 - 2802026 - | hypothetical protein Caul_2579 2803637 - 2802483 - | peptidase M23B Caul_2580 2804312 - 2803842 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Caul_2581 2805724 - 2804465 - | tyrosyl-tRNA synthetase Caul_2582 2805995 - 2807119 + | anhydro-N-acetylmuramic acid kinase TERM 1875 2807316 - 2807334 + T 70 -10.2 -3.57639 | opp_overlap 2807306 2807305, overlap 2807314 GAAAGGGTCGCGGAG CGCCGGAC ACC GTCCGGAG TGTTTGTAGGTGTTA Caul_2583 2809152 - 2807848 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Caul_2584 2809600 - 2809202 - | 3-demethylubiquinone-9 3-methyltransferase TERM 1876 2809558 - 2809584 + g 73 -13.1 -3.47573 | gap 1, opp_overlap 2809538 2809571 TCGCCGCTTCGGCTT GGCCG-TCCTGA AACA TCAGGAACGGCC TTATGGTCTGGCTCA TERM 1877 2809596 - 2809643 + g 100 -23 -3.50393 | gap 1, overlap 2809604 GGCCTTATGGTCTGG CTCACCGTCATTCTC-CCAGAAC GTT GTTCGGGGGAGGATGACGGTGAG TTGTCTCAGATCGCA Caul_2585 2810331 - 2809678 - | hypothetical protein TERM 1878 2810374 - 2810353 - H 76 -5.7 -4.65895 | opp_overlap 2810357 2810369, overlap 2810355 GTCCCTATCCAAAAA GGGGCGACG GGGT CGTCTCCTC GGCCTAAAAGGGCGA Caul_2586 2810531 - 2811010 + | BadM/Rrf2 family transcriptional regulator Caul_2587 2811007 - 2812140 + | aminotransferase class V Caul_2588 2812140 - 2813609 + | cysteine desulfurase activator complex subunit SufB Caul_2589 2813606 - 2813938 + | hypothetical protein Caul_2590 2813935 - 2814183 + | hypothetical protein TERM 1879 2815170 - 2815120 - g 73 -9.5 -3.86202 | CTGGACTACATCAAA CCCGACCG-CGTCCACGTGCTGGCC GCC GGGCGGATCGTGG-CGTCGGGCGGG CCGGAGCTGGCCTTG Caul_2591 2814484 - 2815230 + | FeS assembly ATPase SufC Caul_2592 2815361 - 2816392 + | SufBD protein TERM 1880 2816634 - 2816616 - g 76 -8.1 -4.26076 | gap 1 GCAGGCCTATGAAAA CGCC-CGG GAAA CCGTGGCG AAGTTCATCAACGCA Caul_2593 2816392 - 2817618 + | SufS subfamily cysteine desulfurase Caul_2594 2817625 - 2817984 + | FeS assembly SUF system protein Caul_2595 2818131 - 2818523 + | iron-sulfur cluster assembly accessory protein Caul_2596 2818523 - 2818723 + | hypothetical protein Caul_2597 2819648 - 2818854 - | phospholipid/glycerol acyltransferase Caul_2598 2820235 - 2819675 - | TetR family transcriptional regulator TERM 1881 2820944 - 2820958 + G 72 -5.6 -4.40561 | overlap 2820946 CGCATCGAGGCGTCC GACCGC AAG GCGGTG TTCTTTTTCGGCCCC TERM 1882 2821154 - 2821123 - g 70 -15.1 -2.70932 | gap 1, opp_overlap 2821115 CGCCGTGGCCAACGA CGCCGGCC-CCGGC CACAT GCTGGCGGCCGGCG GCGCGCCTCTGCTGT Caul_2599 2820332 - 2821324 + | glycosyl transferase family protein Caul_2600 2821325 - 2821720 + | hypothetical protein Caul_2601 2822855 - 2821740 - | hypothetical protein Caul_2602 2823347 - 2822856 - | CinA domain-containing protein Caul_2603 2824605 - 2823454 - | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein TERM 1883 2823592 - 2823612 + g 70 -8.9 -3.92324 | opp_overlap 2823578 ATCGGCCAGGCGCTG CCGCATGGC CGC GCGGTGCGG TTTGATCTTCGGCCG Caul_2604 2824704 - 2825711 + | NifR3 family TIM-barrel protein TERM 1884 2825809 - 2825848 + G 82 -15 -3.53224 | gap 1, overlap 2825782 2825811 GGTCGTCGACCGGGA GGGCGCCTTGGTCGCCGTC AAC GA-GGCGGCCGAGGCGCTG TTTGGCCAGGGCCTG TERM 1885 2825811 - 2825846 + G 91 -19.8 -3.34398 | gap 1, overlap 2825782 2825809 TCGTCGACCGGGAGG GCGCCTTGGTCGCCGTC AAC GA-GGCGGCCGAGGCGC TGTTTGGCCAGGGCC Caul_2605 2825708 - 2826838 + | signal transduction histidine kinase, nitrogen specific, NtrB Caul_2606 2826835 - 2828256 + | nitrogen metabolism transcriptional regulator, NtrC, Fis family Caul_2607 2828399 - 2830642 + | multi-sensor signal transduction histidine kinase Caul_2608 2830639 - 2832027 + | two component, sigma54 specific, Fis family transcriptional regulator Caul_2609 2832194 - 2833057 + | D-amino acid aminotransferase Caul_2610 2833194 - 2833442 + | RNA-binding protein Hfq Caul_2611 2833491 - 2834831 + | GTP-binding proten HflX Caul_2612 2834898 - 2835446 + | glycoside hydrolase family protein Caul_2613 2836220 - 2835465 - | nucleoside triphosphate pyrophosphohydrolase TERM 1886 2835609 - 2835579 - G 72 -5.3 -4.45544 | CTCGATGAAGGAAAA GCGCCGCACGAAC TTGGC GTTGGTGGCGCGC AGGGCGTCCTCGGGC Caul_2614 2837658 - 2836267 - | major facilitator transporter TERM 1887 2836946 - 2836927 - G 77 -11.4 -3.85878 | gap 1, overlap 2836918 2836928 GAAGAACAGGAACAA CGCGCCGGC GAT GCCGG-GCG CCAGGCCCATCAGCA Caul_2615 2838250 - 2837765 - | hypothetical protein TERM 1888 2838045 - 2838067 + g 75 -6.9 -4.4078 | gap 1, overlap 2838047 ACCAGGTTGAGAGTT CCGCCACCCG GACG CGGG-GGCAG TTTTCGTTCGACGGA Caul_2616 2839492 - 2838317 - | Na+/H+ antiporter NhaA Caul_2617 2841166 - 2839706 - | cobyric acid synthase TERM 1889 2841010 - 2841035 + g 78 -13.3 -3.65201 | GGGCTCGCCCGATCT CGCCGCCGT CCTCGGTC ACGGCGGCG TTGTTGGACATGTTC Caul_2618 2841249 - 2841542 + | hypothetical protein TERM 1890 2842087 - 2842130 + G 70 -12.4 -3.36515 | gap 1, overlap 2842085 TGCGCGCCAGCTACG GCGC-CAAGGTCGGCAACGTC GTC GATGTGGCGGACCTGGAGCGC TATTTCGCGATCAAC Caul_2619 2841693 - 2845160 + | transcription-repair coupling factor Caul_2620 2845359 - 2845751 + | hypothetical protein Caul_2621 2845859 - 2846182 + | ArsR family transcriptional regulator Caul_2622 2846179 - 2846646 + | activator of Hsp90 ATPase 1 family protein Caul_2623 2846643 - 2846867 + | hypothetical protein TERM 1891 2847224 - 2847202 - g 70 -4.2 -4.4078 | gap 1 CGGCTCCAAGCAAAA GGATGTGCG CTATCT CG-ACATCC ACGAGGACGCCCCCT Caul_2624 2846873 - 2847304 + | hypothetical protein Caul_2625 2847648 - 2847319 - | hypothetical protein Caul_2626 2847813 - 2848241 + | hypothetical protein TERM 1892 2848249 - 2848231 - f 78 -14.6 -3.09492 | CGCGCAAGGTTAAGA CGCCGTCA TAG TGACGGCG CGCGCCTTTGGCCGT Caul_2627 2848317 - 2849474 + | sulphate transporter Caul_2628 2849649 - 2849882 + | XRE family transcriptional regulator Caul_2629 2850579 - 2849908 - | hypothetical protein Caul_2630 2851726 - 2850785 - | copper resistance B precursor Caul_2631 2853393 - 2851723 - | CopA family copper resistance protein Caul_2632 2853677 - 2853390 - | hypothetical protein Caul_2633 2853741 - 2856104 + | copper-translocating P-type ATPase Caul_2634 2856894 - 2856181 - | N-formylglutamate amidohydrolase TERM 1893 2857777 - 2857801 + G 74 -12.1 -3.53563 | TCCACGCCAAGCCGC GCCCCTCCATG GCA CATGGGCGGGC TTTCCGACCGACTAT Caul_2635 2856968 - 2857903 + | transglutaminase domain-containing protein Caul_2636 2858025 - 2858903 + | transglutaminase domain-containing protein TERM 1894 2861357 - 2861386 + G 77 -15.7 -3.14881 | gap 1, overlap 2861345 2861359 GCCGCGGTGCCCTTG CC-GGGCGAGGGCG AAG CGCCGTCGCCCTGG TTGGTCGACCGATTG TERM 1895 2861359 - 2861383 + G 78 -17.1 -2.77899 | overlap 2861357 2861345 CGCGGTGCCCTTGCC GGGCGAGGGCG AAG CGCCGTCGCCC TGGTTGGTCGACCGA Caul_2637 2859032 - 2862307 + | transglutaminase domain-containing protein TERM 1896 2864825 - 2864792 - g 74 -14.5 -3.07816 | opp_overlap 2864789 2864792 CCTGCAGGGATCCAA CGCCACGCCGACCAA GAAG CTGGGCGGCCTGGCG TGATCTATCAGGTGC Caul_2638 2862297 - 2864828 + | hypothetical protein Caul_2639 2864825 - 2865724 + | transglutaminase domain-containing protein TERM 1897 2866192 - 2866245 + G 73 -15.9 -2.52516 | gap 1, overlap 2866191 2866206 CAACGTTCTCGAATG GCTGACCGAGCGGGCTCGGTCCACGC GGC GCGTGGGCAGCGTTTGCTCGGGC-GC GTTCGTGCTGGCCGC TERM 1898 2866206 - 2866232 + G 71 -10 -3.72695 | overlap 2866192 2866191 GGCTGACCGAGCGGG CTCGGTCCACGC GGC GCGTGGGCAGCG TTTGCTCGGGCGCGT Caul_2640 2865893 - 2866882 + | AraC family transcriptional regulator Caul_2641 2867562 - 2866876 - | ThiJ/PfpI domain-containing protein Caul_2642 2868806 - 2867577 - | di-haem cytochrome c peroxidase Caul_2643 2869258 - 2868803 - | hypothetical protein TERM 1899 2869219 - 2869196 - G 74 -13.1 -3.61715 | overlap 2869197 CACGGCGGCCAACAA CGCCGCGCC TCCAAC GGCGCGGCA GGCGAAAAATCGGCG Caul_2644 2869683 - 2870111 + | hypothetical protein Caul_2645 2870291 - 2871412 + | ThiJ/PfpI domain-containing protein TERM 1900 2871455 - 2871439 - T 70 -7.9 -4.07568 | opp_overlap 2871439 TCTTCCCCCGGAAAA GTGGACG GGG CGTCCGC TTGCTGTAACCGGCC TERM 1901 2871502 - 2871475 - T 100 -17 -3.55622 | overlap 2871476 TGTAACCGGCCGAAA GGGCGACCCCGA CGTG TCGGGGTCGCCG ATCCCGTACTAGAAA TERM 1902 2871501 - 2871476 - T 91 -20.5 -2.73159 | overlap 2871475 GTAACCGGCCGAAAG GGCGACCCCGA CGTG TCGGGGTCGCC GATCCCGTACTAGAA Caul_2646 2873826 - 2871511 - | TonB-dependent receptor plug TERM 1903 2872502 - 2872556 + g 74 -10.7 -3.727 | gap 1 ACATGGCGCCAGGCG GTCAGGTCGCTGGGATTGATGACGCC GGTC GTCG-CATCGGCCTTGGCGACCTGGC TTTCGATATAGTCCG Caul_2647 2876472 - 2873929 - | TonB-dependent receptor Caul_2648 2876748 - 2877320 + | ECF subfamily RNA polymerase sigma-24 factor Caul_2649 2877274 - 2878302 + | anti-FecI sigma factor, FecR TERM 1904 2878316 - 2878358 + T 93 -17.1 -3.53012 | gap 1, opp_overlap 2878324, overlap 2878324 AGACCGGCGAGCCGG CGGAAAAAGGGGCGGACGTC GCGA GACG-CCGCCCCTTTTCGCG TTTCAGAGCGGCGGA TERM 1905 2878350 - 2878324 - T 100 -15.9 -4.57073 | gap 1, opp_overlap 2878316 2878324 GAGCCGGCGGAAAAA GGGGCGGACGTC GCGA GACG-CCGCCCC TTTTCGCGTTTCAGA TERM 1906 2878324 - 2878350 + T 100 -15.9 -4.24002 | gap 1, opp_overlap 2878324, overlap 2878316 GAGCCGGCGGAAAAA GGGGCGGACGTC GCGA GACG-CCGCCCC TTTTCGCGTTTCAGA Caul_2650 2881173 - 2878378 - | hypothetical protein TERM 1907 2879977 - 2880001 + g 71 -9.9 -3.72374 | opp_overlap 2879966, overlap 2879967 2879975 CGAATCCTGGCCCAT GCGCCAGGTGT TGA ACAGCAGGCGC TCTTTGTTGCTGACG Caul_2651 2881383 - 2882864 + | amidohydrolase Caul_2652 2882961 - 2883173 + | hypothetical protein Caul_2653 2883225 - 2884202 + | sodium:dicarboxylate symporter Caul_2654 2884683 - 2885981 + | integrase catalytic region Caul_2655 2887538 - 2887266 - | hypothetical protein TERM 1908 2888373 - 2888358 - R 80 -6.2 -4.68705 | opp_overlap 2888357 2888360 ACAATTCCAAGAAAA TAGGAA CATA TTCCTA CATTTGCCGGCGCGC Caul_2656 2889224 - 2888391 - | LysR family transcriptional regulator Caul_2657 2889368 - 2890177 + | binding-protein-dependent transport systems inner membrane component Caul_2658 2890180 - 2890995 + | ABC transporter related Caul_2659 2890992 - 2892164 + | acyl-CoA dehydrogenase type 2 Caul_2660 2892161 - 2893111 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1909 2893232 - 2893201 - g 73 -12.2 -3.53091 | opp_overlap 2893218, overlap 2893202 ACCGTGCTGCCCAAA TTCGGCTCGCGCGA GCTG CCGCGCCAGCCGAC CCACGAGCAGGAGCG TERM 1910 2893231 - 2893202 - g 70 -15.7 -2.71712 | opp_overlap 2893218, overlap 2893201 CCGTGCTGCCCAAAT TCGGCTCGCGCGA GCTG CCGCGCCAGCCGA CCCACGAGCAGGAGC Caul_2661 2893123 - 2893965 + | class II aldolase/adducin family protein Caul_2662 2893965 - 2894963 + | extracellular solute-binding protein TERM 1911 2896933 - 2896895 - g 70 -8.7 -3.91357 | gap 1, overlap 2896896 TGACAAGTACAAGAA CGCCGGCGGCC-TGGGCG TCGA CGCCGACGGCCACCGCCT GCTGAACTCGCCGCG Caul_2663 2895087 - 2897273 + | TonB-dependent receptor Caul_2664 2897278 - 2897901 + | cysteine dioxygenase type I Caul_2665 2897898 - 2899475 + | rhodanese domain-containing protein Caul_2666 2899487 - 2900140 + | glutathione S-transferase domain-containing protein Caul_2667 2900235 - 2901329 + | alkanesulfonate monooxygenase Caul_2668 2901334 - 2901921 + | flavin reductase domain-containing protein Caul_2669 2902565 - 2901975 - | hypothetical protein Caul_2670 2903744 - 2902650 - | ribonuclease Z Caul_2671 2903852 - 2904760 + | haloalkane dehalogenase Caul_2672 2904774 - 2905190 + | hypothetical protein Caul_2673 2906344 - 2905289 - | hypothetical protein Caul_2674 2908011 - 2906332 - | sulfatase TERM 1912 2906910 - 2906930 + g 79 -15.5 -3.27951 | opp_overlap 2906925, overlap 2906908 TGGCGCCGCCGTTGT CGCTGGTGA AGA TCACCAGCG TGTTCTGGTCGAGTC Caul_2675 2908492 - 2908103 - | hypothetical protein TERM 1913 2908366 - 2908331 - G 81 -7.4 -4.57073 | gap 1, overlap 2908333 CATGCCCGCGAAAAA GCCGGCGACGTCGGCGC GGA GCGTCGCCGTT-CCAGC CAAGCCGTCGCTCGT Caul_2676 2908599 - 2909276 + | DSBA oxidoreductase TERM 1914 2909324 - 2909272 - f 71 -5.5 -4.29176 | gap 3, overlap 2909276 ACATTCAACGGAAAA GCTAGGCTGGCGACGGGGCTTCTGGC CATG GCCCG-AGCCC-GCC-CCAGCACGGC GGCGGTAAAGACTCT Caul_2677 2909504 - 2911783 + | TonB-dependent receptor plug Caul_2678 2911780 - 2912967 + | putative MFS transporter Caul_2679 2913036 - 2913737 + | TetR family transcriptional regulator Caul_2680 2913779 - 2915053 + | FAD-linked oxidoreductase Caul_2681 2915067 - 2916218 + | alanine racemase domain-containing protein Caul_2682 2916846 - 2916229 - | hypothetical protein Caul_2683 2917674 - 2916985 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1915 2917622 - 2917647 + g 75 -4.5 -4.66163 | ACGTGGCCGGAAGCG CTCCAGCGCTC GGAG GTGCGAAGGAG TTTTTCGGTAGGGCT Caul_2684 2918660 - 2918067 - | twin-arginine translocation pathway signal Caul_2685 2919004 - 2919672 + | two component LuxR family transcriptional regulator Caul_2686 2920197 - 2919952 - | hypothetical protein Caul_2687 2921416 - 2920448 - | LysR family transcriptional regulator Caul_2688 2921565 - 2922650 + | secretion protein HlyD family protein Caul_2689 2922647 - 2924182 + | EmrB/QacA family drug resistance transporter Caul_2690 2924166 - 2925623 + | RND efflux system outer membrane lipoprotein TERM 1916 2925879 - 2925909 + G 74 -11.8 -3.72027 | CATCGGCATCCACCA GGTCTCGGCTCG CGAGATT CGCGCCGAGGCC TTCTTCCTGGGCAAT Caul_2691 2925835 - 2926053 + | hypothetical protein Caul_2692 2926050 - 2926232 + | hypothetical protein TERM 1917 2926390 - 2926401 + G 72 -5.8 -4.2828 | overlap 2926384 TCATCACGCCGGCGG GCAC GACC GTGC TTTTGGTCAATGAAG Caul_2693 2926233 - 2926433 + | hypothetical protein Caul_2694 2927194 - 2926487 - | two component transcriptional regulator Caul_2695 2929895 - 2927202 - | osmosensitive K+ channel signal transduction histidine kinase Caul_2696 2930831 - 2930025 - | hypothetical protein Caul_2697 2931622 - 2930828 - | TatD family hydrolase Caul_2698 2932631 - 2931627 - | DNA polymerase III, delta prime subunit Caul_2699 2933260 - 2932634 - | dTMP kinase Caul_2700 2934271 - 2933315 - | rare lipoprotein A TERM 1918 2935561 - 2935524 - g 74 -14.7 -3.01712 | gap 1, opp_overlap 2935522 2935521 CTTCGCCTGCCAAGA CGGCGACCTCGACGCGCG GAT CGCGCTGCGCGG-CGCCG ACCTTTCCGGACCTT Caul_2701 2934574 - 2936199 + | zinc finger SWIM domain-containing protein Caul_2702 2936713 - 2936171 - | hypothetical protein TERM 1919 2937638 - 2937668 + G 71 -9.7 -3.68351 | gap 2, opp_overlap 2937634, overlap 2937640 GCCTTCATCAAGTCG GC-CGCCGC-CATGC TGC GCAAGGGCGGCGTGC TTTGGATCGTCGCCA Caul_2703 2936867 - 2937784 + | methyltransferase small Caul_2704 2937781 - 2938518 + | pseudouridine synthase Caul_2705 2938511 - 2938756 + | SirA family protein Caul_2706 2939720 - 2938728 - | ribonuclease BN TERM 1920 2939780 - 2939751 - R 100 -17.9 -3.66178 | overlap 2939771 2939772 CGCTTCAACGTCAAA GACCCGCCGCTTC AGGG AAAGCGGCGGGCC TCCGCAGGACGAACC TERM 1921 2939905 - 2939890 - R 71 -9 -3.75153 | GCGGCTGAACGGAAA TGACGG TGAG CCGTCA GCAAATACACGCTGT TERM 1922 2939969 - 2939911 - R 100 -19.1 -3.73224 | gap 2, overlap 2939913 2939915 TGAGCCGTCAGCAAA TACACGCTGTCATCCCGGAT-AA-GGCCC AAA GGGCCGCCGATCCGGGATGACAGCGTCGA AAGGGTCTATAGAGC TERM 1923 2939967 - 2939913 - R 100 -21.7 -3.45027 | gap 2, overlap 2939911 2939915 AGCCGTCAGCAAATA CACGCTGTCATCCCGGAT-AA-GGCCC AAA GGGCCGCCGATCCGGGATGACAGCGTC GAAAGGGTCTATAGA TERM 1924 2939965 - 2939915 - R 100 -24.3 -3.29704 | gap 2, overlap 2939913 2939911 CCGTCAGCAAATACA CGCTGTCATCCCGGAT-AA-GGCCC AAA GGGCCGCCGATCCGGGATGACAGCG TCGAAAGGGTCTATA Caul_2707 2941103 - 2939976 - | L-carnitine dehydratase/bile acid-inducible protein F Caul_2708 2941310 - 2942635 + | response regulator receiver protein TERM 1925 2942651 - 2942681 + F 86 -8.3 -4.58395 | opp_overlap 2942651 2942668, overlap 2942668 AGGCGCGGAGCAAAA TCCTCATCCTTCG ACAAG CTCAGGATGAGGA TTTTTGAAGCGTCGG TERM 1926 2942681 - 2942651 - f 79 -8.3 -4.25283 | opp_overlap 2942651 2942668, overlap 2942668 AGGCGCGGAGCAAAA TCCTCATCCTTCG ACAAG CTCAGGATGAGGA TTTTTGAAGCGTCGG Caul_2709 2942785 - 2943429 + | DSBA oxidoreductase Caul_2710 2944222 - 2943527 - | TetR family transcriptional regulator Caul_2711 2946735 - 2944435 - | TonB-dependent receptor Caul_2712 2947011 - 2947817 + | glucose-1-phosphate cytidylyltransferase Caul_2713 2948765 - 2947833 - | N-acylneuraminate-9-phosphate synthase Caul_2714 2948894 - 2949862 + | NAD-dependent epimerase/dehydratase Caul_2715 2950914 - 2949814 - | CDP-glucose 4,6-dehydratase Caul_2716 2951011 - 2952429 + | DegT/DnrJ/EryC1/StrS aminotransferase Caul_2717 2952447 - 2953580 + | glycosyl transferase family protein Caul_2718 2954785 - 2953640 - | FkbM family methyltransferase TERM 1927 2953729 - 2953685 - G 74 -15.2 -3.04248 | gap 3 GAACACCTGCGAATA GTGGGCGA--AGGCCAGGCGC CAGGTC GCGCC-GGCCTCGTCGCCCAC CCGCAGGCGCAGCGC Caul_2719 2955606 - 2954782 - | short-chain dehydrogenase/reductase SDR Caul_2720 2956401 - 2955631 - | short-chain dehydrogenase/reductase SDR Caul_2721 2957240 - 2956398 - | xylose isomerase domain-containing protein TERM 1928 2956547 - 2956497 - G 80 -16.9 -3.23216 | gap 1, overlap 2956532 CTGCAGGATCAGGAA GCCGTCATAGCCGACCGCGTTCAG CAGC CTGAACACCGTCGGC-AGGTCGGC GTCGCCCTGGCCGAG TERM 1929 2956989 - 2956965 - G 70 -12.8 -3.28712 | overlap 2956980 2956983 CGTCGCCTTCCAGAA CGGCGCCTGC ATGAA GCAGTCGCCG GTGATCGACGATACG Caul_2722 2957989 - 2957237 - | short-chain dehydrogenase/reductase SDR TERM 1930 2957850 - 2957831 - G 71 -11.4 -3.5764 | gap 1, overlap 2957813 AATCGTATGGCCAAA CGCCTCGCG CGG CGCG-GGCG AGCGCGCCACCCCGA Caul_2723 2959788 - 2957998 - | thiamine pyrophosphate protein central region Caul_2724 2960751 - 2959975 - | hypothetical protein Caul_2725 2961600 - 2960764 - | glycosyl transferase family protein Caul_2726 2964213 - 2961724 - | TonB-dependent receptor plug TERM 1931 2963161 - 2963136 - G 74 -14.7 -3.01791 | gap 1 AGCTGTCGTTCAACA CGACGGCCAGCG CCG CGC-GGCCGCCG GTGCGGGTCGTACGA Caul_2727 2965262 - 2964285 - | anti-FecI sigma factor, FecR Caul_2728 2965857 - 2965360 - | ECF subfamily RNA polymerase sigma-24 factor TERM 1932 2965995 - 2965942 - H 76 -15.2 -2.52464 | gap 2 CGCGTCCTCAACCTA GGGCGCTGGCGGTCGCCGGTCCAGCG GTCG CGATGG-CGGGCGAACGCC-GCCCCC GGCGACCGCGGACTC Caul_2729 2966103 - 2966570 + | hypothetical protein Caul_2730 2967071 - 2966592 - | hypothetical protein Caul_2731 2967881 - 2967081 - | ModE family transcriptional regulator Caul_2732 2968027 - 2968698 + | molybdate ABC transporter, inner membrane subunit Caul_2733 2969648 - 2968761 - | taurine dioxygenase Caul_2734 2970256 - 2969741 - | adenosylcobinamide kinase TERM 1933 2970363 - 2970335 - H 73 -6.6 -4.37067 | overlap 2970353 2970354 GAAAGAGGATGAAAA GGGAACTCGGGT GTGAA ACCCGGGCTGCC CCCGCAACTGTAAGC Caul_2735 2970604 - 2972529 + | TonB-dependent receptor TERM 1934 2972574 - 2972611 + G 87 -20.5 -3.06501 | gap 1 CACGGCGGCCGCCTC GGCG-CGGCGCGCACGGC CTG GCCGGACGCGCCGACGCC TTGGCTGGACCTGTC Caul_2736 2972532 - 2973518 + | L-threonine-O-3-phosphate decarboxylase Caul_2737 2973515 - 2974120 + | cob(I)alamin adenosyltransferase Caul_2738 2974156 - 2974971 + | periplasmic binding protein Caul_2739 2974968 - 2975951 + | transport system permease protein Caul_2740 2975948 - 2976742 + | ABC transporter related Caul_2741 2976777 - 2977691 + | cobalamin biosynthesis protein CobD TERM 1935 2978045 - 2978093 + G 71 -9.7 -3.72576 | gap 3 CCACGGGCGTGAGAG TCCGGGTGGTCGACGCCGGGGTCG ACGC CGACC-TGCC--CGACCATCCGGA TTTGGTCGCCGCCAA TERM 1936 2978475 - 2978508 + G 73 -10.3 -3.85698 | gap 1, overlap 2978453 CGCCGTGCTCGGCGC GGCGTCGATGCGGCGC GTG GCGTTG-ATCGACGGC TTTATCAGCACGGCG Caul_2742 2977720 - 2978766 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Caul_2743 2978766 - 2979524 + | cobalamin 5'-phosphate synthase Caul_2744 2979521 - 2980033 + | hypothetical protein TERM 1937 2980350 - 2980326 - g 79 -11.3 -4.07568 | GGGCTTCGCTGAAAA GCGGCCGGCCA AGC CGACCCGCCGC CACCTGGCCGCGACC TERM 1938 2981434 - 2981459 + G 79 -14.7 -3.29324 | opp_overlap 2981450, overlap 2981431 GGCGACCTGGCCGCG GCGCTGGCGGT CGAA ACCGCCAGCGA TTGACTTTGGCTGGC Caul_2745 2980111 - 2981463 + | hypothetical protein TERM 1939 2982769 - 2982741 - g 70 -12.4 -3.36492 | gap 1, overlap 2982742 GCGCGAAGGCGACAA GCGCGGCGGCGGT CGTG ACCGC-GCCCCGC GTGGCGGCGACCGCG Caul_2746 2981572 - 2983608 + | DEAD/DEAH box helicase domain-containing protein TERM 1940 2983664 - 2983628 - T 81 -15.7 -3.02511 | opp_overlap 2983631 TCGAGCCGCTCAAGA TCGCGCCCGCCGCTCCA CAC CGGAGCGGCGGGCGTTT TCGTGTCTGGGCGTG TERM 1941 2983631 - 2983661 + T 100 -25.5 -4.39166 | opp_overlap 2983628 AGCCGCTCAAGATCG CGCCCGCCGCTCC ACACC GGAGCGGCGGGCG TTTTCGTGTCTGGGC TERM 1942 2983857 - 2983880 + T 70 -10.2 -3.56092 | gap 1, opp_overlap 2983848 AAAGCACGGGAAGGG GCGTCGGCCGG CGA CCGGACG-CGC TTTCAGGGGTGGTCG Caul_2747 2985820 - 2984288 - | aldehyde dehydrogenase TERM 1943 2986409 - 2986376 - g 70 -3.7 -4.43392 | gap 1, opp_overlap 2986401, overlap 2986378 CCAAAAGGAAAACAA GTCGCTGGAGACCCGC CTG GCGGAA-TCCACCGCC GAGGTCGATCGTCTG Caul_2748 2985921 - 2986979 + | diguanylate cyclase TERM 1944 2986992 - 2987023 + F 71 -5.1 -4.42788 | overlap 2986995 TAGCGTTTCCGAAGC TGATTTCGCCCCC CGTTTC GGCGGCGGAATAA TTTTCTGGCGTTCCC Caul_2749 2987093 - 2987896 + | enoyl-CoA hydratase Caul_2750 2988428 - 2987976 - | cyclase/dehydrase Caul_2751 2989490 - 2988435 - | lipoyl synthase Caul_2752 2989522 - 2990589 + | lysophospholipase L2, putative TERM 1945 2990725 - 2990741 + F 80 -5.8 -4.72272 | gap 1, overlap 2990727 GCTTCCGGGAGGTTT CG-CCGG CATG CCGGTCG TTTTTAATGCGCAGG Caul_2753 2990732 - 2992285 + | AMP-dependent synthetase and ligase Caul_2754 2992415 - 2992810 + | DoxX family protein TERM 1946 2992834 - 2992862 + T 100 -20.3 -3.96469 | opp_overlap 2992834 AGGAGCCAACAGAAA GGACGGCGCTGGG ATC CCGAGCGCCGTCC TTCTTCTTGCCGTCT TERM 1947 2992862 - 2992834 - T 100 -20.3 -4.22009 | opp_overlap 2992834 AGGAGCCAACAGAAA GGACGGCGCTGGG ATC CCGAGCGCCGTCC TTCTTCTTGCCGTCT Caul_2755 2994286 - 2992886 - | dihydrolipoamide dehydrogenase Caul_2756 2994843 - 2994367 - | glutathione peroxidase Caul_2757 2996273 - 2994963 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase TERM 1948 2995704 - 2995761 + g 86 -19.2 -3.14564 | gap 3 GCGCGGCGCGGCGGC GGCCGGTGCGCTAGCGGTCGCCGAGGCCG AGG CGGCCTTGGCGG-CG--GGCGCGCCGCCC TTGGTCGCGGCCTCA Caul_2758 2996723 - 2996286 - | glutathione-dependent formaldehyde-activating GFA Caul_2759 2998143 - 2996779 - | pyruvate dehydrogenase subunit beta Caul_2760 2999171 - 2998140 - | pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit TERM 1949 2999063 - 2999031 - G 70 -12.8 -3.30124 | gap 1, opp_overlap 2999026 GCCCATGCCGTACAA CTGACCCGCGCGCTC TTCG AAGCG-GCGGATCAG CAGCATGTCCTGGTA TERM 1950 2999299 - 2999278 - R 74 -10.1 -3.71649 | overlap 2999271 TTGTCAAACCCGAAA CGGGTCAGG CGCG CCTGATCCG TCGACAGAGCCTAGA Caul_2761 2999633 - 2999337 - | septum formation initiator TERM 1951 2999818 - 2999840 + r 78 -6.8 -4.67038 | TTCGCGGTGTTTTTC GCGGCGCCGC GGC GCGATACCGC TTTTGCTTTTAGAAA TERM 1952 2999970 - 2999935 - R 100 -17 -4.07568 | gap 1, opp_overlap 2999942, overlap 2999920 2999942 TCGTTCGCCGCAAAA CGA-AAAAGGCGGCGCC CGA AGCGCCGCCTTTCGTCG TCTTGATCGTGGATT TERM 1953 2999962 - 2999942 - R 100 -16.1 -5.0925 | opp_overlap 2999942, overlap 2999920 2999935 CCGCAAAACGAAAAA GGCGGCGCC CGA AGCGCCGCC TTTCGTCGTCTTGAT TERM 1954 2999942 - 2999962 + r 91 -15.4 -3.8505 | opp_overlap 2999920 2999942 2999935 CCGCAAAACGAAAAA GGCGGCGC CCGAA GCGCCGCC TTTCGTCGTCTTGAT Caul_2762 3001266 - 2999986 - | phosphopyruvate hydratase Caul_2763 3002408 - 3001380 - | peptidase A2A TERM 1955 3002512 - 3002550 + r 100 -13.9 -4.27117 | gap 1, opp_overlap 3002513 3002519, overlap 3002519 TCGTTAAGACGAAAA GC-GAAAAGGCGGCGGTC CGGG GACCGCCGCCTTTCAGGC TTTGTCTTGTCGCCC TERM 1956 3002548 - 3002513 - R 95 -19.8 -3.25084 | opp_overlap 3002512 3002519, overlap 3002519 CGTTAAGACGAAAAG CGAAAAGGCGGCGGTC CGGG GACCGCCGCCTTTCAG GCTTTGTCTTGTCGC TERM 1957 3002519 - 3002542 + r 100 -19.6 -3.65828 | opp_overlap 3002519 3002513, overlap 3002512 GACGAAAAGCGAAAA GGCGGCGGTC CGGG GACCGCCGCC TTTCAGGCTTTGTCT TERM 1958 3002542 - 3002519 - R 100 -19.6 -4.44277 | opp_overlap 3002512 3002519, overlap 3002513 GACGAAAAGCGAAAA GGCGGCGGTC CGGG GACCGCCGCC TTTCAGGCTTTGTCT Caul_2764 3002745 - 3002605 - | ribosomal protein L32 Caul_2765 3004556 - 3002904 - | CTP synthetase TERM 1959 3003866 - 3003879 + g 72 -5.9 -4.25104 | GCACGTTGCAGAACT GCGCG ATCT TGCGC TTTTCCTCGACCGGG TERM 1960 3004626 - 3004646 + r 90 -14 -4.07568 | opp_overlap 3004624 3004623 CAACAGTAAAATGCG GCCAGCCC TTACT GGGCTGGC TTTTCGGCGGGCGCC Caul_2766 3005143 - 3004634 - | preprotein translocase, SecG subunit Caul_2767 3005297 - 3005815 + | GCN5-related N-acetyltransferase Caul_2768 3006612 - 3007613 + | signal transduction histidine kinase TERM 1961 3007702 - 3007673 - T 72 -13.5 -2.71924 | gap 1, overlap 3007672 GATCCGCCCCCAAAG GCGGACG-CGCGGG GAA CCCGCGTCGCGCGC GGTCGACGCCCCTAC Caul_2769 3008502 - 3007714 - | Triose-phosphate isomerase TERM 1962 3008009 - 3007982 - G 74 -12 -3.57462 | gap 1, overlap 3007983 TAGGCCACGGCGAAA GCCTGGCCCGCCA GGC TGGCGGG-CAGGG ATTCCCGCGCCATGC TERM 1963 3008008 - 3007983 - G 70 -15.5 -2.74263 | gap 1, overlap 3007982 AGGCCACGGCGAAAG CCTGGCCCGCCA GGC TGGCGGG-CAGG GATTCCCGCGCCATG TERM 1964 3008342 - 3008362 + g 74 -13.9 -3.30124 | GCCGGCGGGCAGATC GCCACCCGG GCG CCGGGCGGC TTGTCGGCGATGGCG TERM 1965 3008572 - 3008609 + H 82 -11.3 -4.08064 | gap 1 TACTATACCCGCTGC TCGCGTCCGTTCCGTCGC CCT GCG-TGGAACGCGTGCGA TTTTCGAGGAAGGTT TERM 1966 3009278 - 3009264 - g 72 -9.2 -4.09685 | GGCGACCGTCGAAAA GCCGGC TCC GCCGAC CGACGCCCAGCTCCA Caul_2770 3008635 - 3010602 + | rotamase family protein Caul_2771 3010599 - 3012134 + | anthranilate synthase component I Caul_2772 3012407 - 3012189 - | hypothetical protein Caul_2773 3012874 - 3012434 - | hypothetical protein Caul_2774 3013500 - 3012871 - | hypothetical protein Caul_2775 3014149 - 3013481 - | hypothetical protein Caul_2776 3014280 - 3014876 + | anthranilate synthase component II Caul_2777 3014879 - 3015922 + | anthranilate phosphoribosyltransferase TERM 1967 3016554 - 3016537 - gf 71 -12.7 -3.05384 | opp_overlap 3016521, overlap 3016508 CTGGCCGTCACCGAA CGCCTGG CCGT CCAGGCG CCCAGCGACGCCCTG Caul_2778 3015919 - 3016707 + | indole-3-glycerol-phosphate synthase Caul_2779 3016673 - 3018010 + | beta-lactamase Caul_2780 3018616 - 3018017 - | isoprenylcysteine carboxyl methyltransferase TERM 1968 3018713 - 3018727 + r 78 -3.4 -5.07652 | overlap 3018694 3018693 ACCTGATTGCATCAG GCCGGG GTT CTAGGC TTTTGTTTTAACCCA Caul_2781 3019486 - 3018785 - | hypothetical protein TERM 1969 3019162 - 3019178 + g 72 -4.3 -4.56597 | overlap 3019164 TGGGCGGGTGTCCCG GATGGGT CAG GCCCAGC TTTTTCAGGGCCAGC Caul_2782 3019759 - 3020466 + | LexA repressor TERM 1970 3020511 - 3020543 + T 73 -11.4 -3.53811 | gap 1, opp_overlap 3020511 3020535, overlap 3020499 GACAGCTCCCACAAA GGGGGAGCATCT-GT TCGG ACTAGATCCTCCCCC TTTGGGGGAGGTGGC TERM 1971 3020543 - 3020511 - T 79 -11.4 -3.87373 | gap 1, opp_overlap 3020499 3020511, overlap 3020535 GACAGCTCCCACAAA GGGGGAGCATCT-GT TCGG ACTAGATCCTCCCCC TTTGGGGGAGGTGGC Caul_2783 3020987 - 3020586 - | glutathione-dependent formaldehyde-activating GFA TERM 1972 3020786 - 3020757 - G 74 -13.5 -3.28712 | CTCCGCGGTCCAGAA CACCGATGCGCGG CAGA CCGCGCAGCCGTG GTGCTGGCCGTGCTG Caul_2784 3021681 - 3021019 - | glutathione S-transferase domain-containing protein Caul_2785 3023864 - 3021684 - | ComEC/Rec2-related protein Caul_2786 3023899 - 3025323 + | glutamyl-tRNA synthetase TERM 1973 3025567 - 3025583 + G 72 -5.7 -4.25104 | CAAGATCACCTATAT CGATGGC GAC GCCGGCG TTTTGCTGCACCGCG Caul_2787 3025391 - 3026671 + | citrate synthase I TERM 1974 3026695 - 3026726 + T 86 -15.2 -3.55622 | opp_overlap 3026701, overlap 3026701 GCGCCGCTGAATTGG GAGAGAGGCCTCGC GAAA GCGGGGCCTTTTTC TTTAGCGCCCTTCGG TERM 1975 3026701 - 3026720 + T 100 -12.8 -5.27335 | opp_overlap 3026701, overlap 3026695 CTGAATTGGGAGAGA GGCCTCGC GAAA GCGGGGCC TTTTTCTTTAGCGCC Caul_2788 3027000 - 3026728 - | flhB-related protein Caul_2789 3028622 - 3026997 - | hypothetical protein TERM 1976 3027271 - 3027237 - G 70 -12.6 -3.35996 | overlap 3027238 GACGTCCAGCGAGAA GCGGGCGCGCCAGGTG CGG CCCGAGGCGCGACCGC CCTCCCCGCCCGAGC TERM 1977 3028843 - 3028857 + G 74 -11.4 -3.68619 | TGTCGCTGATGGCCG CGGTCG GTA CGACCG TTTGGCTGGATTGGC Caul_2790 3028749 - 3030527 + | integral membrane sensor hybrid histidine kinase Caul_2791 3031730 - 3030531 - | lipid-A-disaccharide synthase TERM 1978 3030579 - 3030630 + g 82 -16.6 -3.28924 | gap 1 CAGCAGCGCTGTCGC CGCCGCTTCGGAC-GGATCGGGC ATGCCGC GCCCCATCCGGTCCAGGGCGGCG TTCTGGGCGGCGATC Caul_2792 3032578 - 3031727 - | hypothetical protein TERM 1979 3031856 - 3031817 - G 80 -16.4 -3.23395 | gap 1, overlap 3031821 ATCGACGATCAGCAA GC-GACCGGCCTCGCCGAC CAC GCCGGCCAGACCGGCCCGC GCCGCGCGCTGGACG TERM 1980 3031851 - 3031821 - G 73 -16.8 -2.57974 | overlap 3031817 ACGATCAGCAAGCGA CCGGCCTCGCCGAC CAC GCCGGCCAGACCGG CCCGCGCCGCGCGCT Caul_2793 3033372 - 3032578 - | UDP-N-acetylglucosamine acyltransferase Caul_2794 3033860 - 3033369 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Caul_2795 3034879 - 3033857 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase TERM 1981 3034877 - 3034865 - G 75 -4.7 -4.57073 | CAGGTCTTCGAAAAA GCGGG GGT CCGGC ATGGGTCCTCTCGGG TERM 1982 3034890 - 3034927 + r 82 -14.8 -3.29096 | gap 1 GGCATGGGTCCTCTC GGGAG-CGGCCCGGGCG TCATC CGCCCAGGCCGACTCGC TTACTACTTGGTCGG Caul_2796 3035560 - 3034931 - | outer membrane chaperone Skp (OmpH) Caul_2797 3037923 - 3035566 - | outer membrane protein assembly complex, YaeT protein Caul_2798 3039425 - 3037941 - | membrane-associated zinc metalloprotease Caul_2799 3040650 - 3039445 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1983 3040388 - 3040335 - G 70 -15.1 -2.70932 | gap 1 CGGCCGCGCCAACGA TGGCCGACATCACCCAGTCCGC-GCC CAT GGCGGCGGCCTCGGAGACGGCGGCCG GGCCGGCGGCGGCCC Caul_2800 3041513 - 3040647 - | phosphatidate cytidylyltransferase TERM 1984 3040886 - 3040839 - G 72 -3.3 -4.58283 | gap 2, overlap 3040844 CAAGCCGCCGAAAAA CCCA-ACCGCCGCCAGAG-TGGG CCAG CTCAGCCCCGTCGGCGGCATGTG CGCGACCCTCAGGGC Caul_2801 3042270 - 3041491 - | undecaprenyl diphosphate synthase Caul_2802 3042883 - 3042317 - | ribosome recycling factor Caul_2803 3043646 - 3042909 - | uridylate kinase TERM 1985 3043798 - 3043766 - R 100 -24.9 -4.56775 | opp_overlap 3043768 ACCCGGGCGCAAAAA GGGCGCGGCGCGC GCTTGAT GCGCGCCGCGCCC TCGAAGGCGGTCTGG Caul_2804 3044785 - 3043847 - | elongation factor Ts TERM 1986 3044111 - 3044140 + g 70 -9.2 -3.91897 | GGGCTTGCCCGACTC GAGCGCCTGCTC GGTGAA GATCTGGCGCTC TTTCTCGATGGCGGC TERM 1987 3044890 - 3044861 - R 100 -14.3 -4.87133 | overlap 3044862 3044864 ACGCGTGAAACAAAA GTACGACCGGGCT TGAT AGCCCGGTCGCAT GTCAGGTTCGCGAAG TERM 1988 3044889 - 3044862 - R 95 -17.8 -3.51557 | overlap 3044861 3044864 CGCGTGAAACAAAAG TACGACCGGGCT TGAT AGCCCGGTCGCA TGTCAGGTTCGCGAA TERM 1989 3044887 - 3044864 - R 93 -18.2 -3.32684 | overlap 3044862 3044861 CGTGAAACAAAAGTA CGACCGGGCT TGAT AGCCCGGTCG CATGTCAGGTTCGCG TERM 1990 3044933 - 3044907 - R 90 -18 -3.02144 | overlap 3044925 TCAGGTTCGCGAAGA TCGCGCCGGGAT CGA AACCCGGCGCGA TGATCGGAAAATCAG Caul_2805 3045886 - 3044945 - | 30S ribosomal protein S2 Caul_2806 3046224 - 3046874 + | hypothetical protein Caul_2807 3047232 - 3046882 - | glutathione-dependent formaldehyde-activating GFA Caul_2808 3050789 - 3047358 - | DNA polymerase III subunit alpha TERM 1991 3047652 - 3047634 - G 72 -3.7 -4.56597 | overlap 3047636 GTCGTCGCCGAAAAA CCGCACC TCGCC GTCGCGG GCCTTGGCGCGGACC TERM 1992 3050971 - 3050984 + H 84 -4.5 -5.24129 | overlap 3050968 ACGCAAGAGGCCCTC GTTCG ATTG CGAGC TTTTTTGTCGCGGCC Caul_2809 3051066 - 3052025 + | inosine/uridine-preferring nucleoside hydrolase Caul_2810 3052736 - 3052044 - | ABC transporter related Caul_2811 3054003 - 3052729 - | LolC/E family lipoprotein releasing system, transmembrane protein Caul_2812 3055340 - 3054003 - | prolyl-tRNA synthetase TERM 1993 3054768 - 3054725 - G 71 -11.7 -3.54459 | TGAACTCGTGGGAAA GGTCGCCGCCGAT-CGGGCCG GTGT CGGCGCGCATCGGCA-CGGCC TTCAGGCCCATGCGC TERM 1994 3055475 - 3055447 - R 100 -18.9 -4.4078 | opp_overlap 3055450, overlap 3055450 GCCGGCTAACGAAAA GAAGGCCGCGCGA TCG TCGCGCGGCCTTT CAAGTCATCGTCGGG TERM 1995 3055472 - 3055450 - R 100 -20.6 -4.32402 | opp_overlap 3055450, overlap 3055447 GGCTAACGAAAAGAA GGCCGCGCGA TCG TCGCGCGGCC TTTCAAGTCATCGTC TERM 1996 3055450 - 3055472 + r 100 -20.6 -3.62572 | opp_overlap 3055447 3055450 GGCTAACGAAAAGAA GGCCGCGCGA TCG TCGCGCGGCC TTTCAAGTCATCGTC Caul_2813 3055932 - 3055672 - | hypothetical protein Caul_2814 3056348 - 3055932 - | methylmalonyl-CoA epimerase Caul_2815 3057144 - 3056419 - | rhomboid family protein Caul_2816 3058846 - 3057152 - | beta-lactamase domain-containing protein Caul_2817 3059628 - 3058843 - | pantothenate kinase Caul_2818 3060380 - 3059628 - | biotin--acetyl-CoA-carboxylase ligase TERM 1997 3060420 - 3060398 - R 78 -10.4 -4.07885 | overlap 3060399 CACGCGTGGCCAAAA GCCGCCGCGG CGG CCCTGGCGGC GGGGTCCAACCAGAT Caul_2819 3061833 - 3060382 - | NADH dehydrogenase subunit N TERM 1998 3060475 - 3060508 + g 82 -16.7 -3.28712 | opp_overlap 3060468 3060466 3060460 3060482, overlap 3060466 CGAGAACAGCGCCGC GGCGAAACCGACCGC GCGC GCGGTCGGTTGCGGC TTGTCCACCGCGCCG TERM 1999 3060501 - 3060482 - G 82 -15 -3.53091 | opp_overlap 3060466 3060475, overlap 3060468 3060466 3060460 AGCGCCGCGGCGAAA CCGACCGC GCGC GCGGTCGG TTGCGGCTTGTCCAC Caul_2820 3063326 - 3061842 - | NADH dehydrogenase subunit M Caul_2821 3065424 - 3063340 - | NADH dehydrogenase subunit L Caul_2822 3065735 - 3065430 - | NADH dehydrogenase subunit K Caul_2823 3066343 - 3065732 - | NADH dehydrogenase subunit J TERM 2000 3066399 - 3066372 - R 78 -5.4 -4.68539 | overlap 3066375 ATGAAAACCACAAAA CAACGACGGGCC GGAT GGCTCGCCGTCT AGCTCGGAATCGCGC TERM 2001 3066396 - 3066375 - R 91 -9.3 -4.42088 | overlap 3066372 AAAACCACAAAACAA CGACGGGCC GGAT GGCTCGCCG TCTAGCTCGGAATCG Caul_2824 3066917 - 3066423 - | NADH dehydrogenase subunit I TERM 2002 3066464 - 3066495 + g 72 -5.1 -4.51174 | gap 1, opp_overlap 3066478 GATTCTTCGCGATCA GCCGCTC-CCAACG ATCGC CGTTGTCGAGCAGC TTTTCCTTGTCGTAG Caul_2825 3067165 - 3066914 - | hypothetical protein Caul_2826 3068235 - 3067162 - | NADH dehydrogenase subunit H TERM 2003 3068198 - 3068157 - G 73 -12.9 -3.41051 | CCAGGCTCAGCAGAA CCCAGATCACGACCAGCAG GATC CCGCCGGTCGTCAGCAGGG TCCACATGACCGGCG Caul_2827 3070301 - 3068241 - | NADH dehydrogenase subunit G Caul_2828 3071627 - 3070308 - | NADH dehydrogenase I subunit F TERM 2004 3071452 - 3071472 + g 73 -9.6 -3.84271 | CCGAAGCCCGCCCCG CCCCGGCC GCGCA GGCCGGAG TTCTTCATGTTGTCG Caul_2829 3071897 - 3071631 - | hypothetical protein Caul_2830 3072010 - 3071894 - | hypothetical protein TERM 2005 3072020 - 3072037 + r 74 -10.5 -3.73106 | overlap 3072035 GGACATCAGGCGGCG GGCTCCG TCTT CGGGGCC TTCTTGGGCTTTTCG Caul_2831 3072696 - 3072010 - | NADH dehydrogenase subunit E Caul_2832 3073025 - 3072693 - | hypothetical protein Caul_2833 3074272 - 3073022 - | NADH dehydrogenase subunit D Caul_2834 3074920 - 3074276 - | NADH dehydrogenase subunit C Caul_2835 3075507 - 3074917 - | NADH dehydrogenase subunit B Caul_2836 3075881 - 3075504 - | NADH dehydrogenase subunit A Caul_2837 3076829 - 3076524 - | hypothetical protein Caul_2838 3076955 - 3077971 + | luciferase family protein Caul_2839 3079302 - 3078070 - | glycosyl transferase group 1 Caul_2840 3079582 - 3079364 - | hypothetical protein Caul_2841 3080467 - 3079586 - | band 7 protein TERM 2006 3080482 - 3080502 + H 71 -9.1 -3.80858 | opp_overlap 3080482 TGGAGCCCTCCAGAA CTGATGTCA AAG TGATATCAG TTTGATCGCTTCTGG Caul_2842 3080572 - 3081840 + | glycosyl transferase family protein TERM 2007 3081890 - 3081843 - T 76 -8.2 -4.10795 | gap 1 TCAAAAAAACTGAAA CTCGGCGAAGCTGGCTCCCGACC ATG GGCCGGGAGCCCCCGT-GACGCG CGCCGGGCAGCAGAG Caul_2843 3082324 - 3081926 - | hypothetical protein TERM 2008 3082416 - 3082389 - R 100 -19.8 -4.18018 | overlap 3082357 GTCCCGCATGGAAAA GGGCGGGACGCC TCGT GGCGGCCCGCCC TCAAAATCCGGTGAC Caul_2844 3082714 - 3082436 - | histone family protein DNA-binding protein TERM 2009 3082840 - 3082806 - R 95 -17.8 -3.53563 | opp_overlap 3082806 3082810, overlap 3082810 AGACGGCCCGTCAAA CGAAGGCGGCGCGGAA AAT CTCCGCGCCGCCTAAG TTATCAACGATAAGT TERM 2010 3082806 - 3082840 + r 91 -17.1 -3.30243 | opp_overlap 3082806 3082810, overlap 3082810 AGACGGCCCGTCAAA CGAAGGCGGCGCGGA AAATC TCCGCGCCGCCTAAG TTATCAACGATAAGT TERM 2011 3082810 - 3082836 + r 91 -20.9 -2.5955 | opp_overlap 3082806 3082810, overlap 3082806 GGCCCGTCAAACGAA GGCGGCGCGGA AAATC TCCGCGCCGCC TAAGTTATCAACGAT TERM 2012 3082836 - 3082810 - R 100 -21.6 -3.51232 | opp_overlap 3082810 3082806, overlap 3082806 GGCCCGTCAAACGAA GGCGGCGCGGAA AAT CTCCGCGCCGCC TAAGTTATCAACGAT Caul_2845 3085260 - 3082861 - | ATP-dependent protease La TERM 2013 3084876 - 3084919 + g 72 -14.4 -3.19668 | ACTGCTCGACGACGG CGCGCGACAGGGCCTCGGCC TCGG GGCCGACGCCCTGGTCCTCG TTCACTTCGCTGATC TERM 2014 3085621 - 3085593 - R 100 -25.3 -3.65351 | opp_overlap 3085593 CGAGTGTGACGGAAA GGGCGCGCCCGGC AAT GCCGGACGCGCCC TTTCCGACCTTGAAG TERM 2015 3085593 - 3085621 + r 100 -23.1 -3.57561 | opp_overlap 3085593 CGAGTGTGACGGAAA GGGCGCGCCCGGC AAT GCCGGACGCGCCC TTTCCGACCTTGAAG Caul_2846 3086907 - 3085645 - | ATP-dependent protease ATP-binding subunit Caul_2847 3087273 - 3087959 + | HAD family hydrolase TERM 2016 3087983 - 3088020 + T 79 -14.1 -3.53444 | opp_overlap 3087990, overlap 3088019 CCAGCTCTTCCGGCA CGAAAAAGCCGCCAACC CCAA GGTCGGCGGCTCTCTCG TTTCAGCGAAGCTAA TERM 2017 3088013 - 3087990 - T 100 -16 -4.72272 | opp_overlap 3087983 TTCCGGCACGAAAAA GCCGCCAACC CCAA GGTCGGCGGC TCTCTCGTTTCAGCG Caul_2848 3088667 - 3088041 - | endopeptidase Clp TERM 2018 3088797 - 3088822 + r 70 -12.6 -2.96695 | gap 1, opp_overlap 3088797, overlap 3088794 TTGCGCCACGAAAAA GGGCGCGA-CC TTCGC GGATCGCGCCC TGGTTTCGTCGCCGA TERM 2019 3088822 - 3088797 - R 100 -14 -4.72272 | opp_overlap 3088794 3088797 TTGCGCCACGAAAAA GGGCGCGACC TTCGCG GATCGCGCCC TGGTTTCGTCGCCGA Caul_2849 3090210 - 3088846 - | trigger factor TERM 2020 3089937 - 3089956 + g 73 -10 -3.84406 | gap 1 AGGGCTTCAGGTCGG GCTG-GCCC GCC GGGCGCAGC TTGTTGTCGTCCAGC TERM 2021 3090297 - 3090275 - R 86 -12.7 -4.07678 | gap 1, opp_overlap 3090291 3090295, overlap 3090268 GGTCAAAACATCAAA GCCGCCCACG TCAC CG-GGGCGGC GAAAGAGCGCCCTTA Caul_2850 3092219 - 3090762 - | carbohydrate kinase, YjeF related protein Caul_2851 3092801 - 3092232 - | phosphoglycerate mutase Caul_2852 3093307 - 3093645 + | nitrogen regulatory protein P-II TERM 2022 3093748 - 3093726 - g 84 -9.9 -4.45544 | opp_overlap 3093725 3093726, overlap 3093738 CCTGATCAAGGAAAA GGACGTCAA GTACG TCGACGTCC GTTTCACCGACGTTC TERM 2023 3094333 - 3094314 - g 73 -7.8 -4.15106 | overlap 3094305 3094327 CATGAAGCCGGAAAA GCACCACC ACGA AGTGGCGC CCGCCCAGCACGAGC Caul_2853 3093685 - 3095094 + | glutamine synthetase, type I Caul_2854 3098291 - 3095634 - | erythromycin esterase Caul_2855 3098863 - 3098288 - | nitroreductase TERM 2024 3098360 - 3098320 - G 72 -13.2 -3.24747 | overlap 3098322 3098323 TGGCGACACGACGAA TATCGGCGGGCCGCCG GGCCGGTGG CGGCGACCCGCCGTTC GGATAGCCGACGATG TERM 2025 3098358 - 3098322 - G 80 -15.8 -3.18849 | overlap 3098320 3098323 GCGACACGACGAATA TCGGCGGGCCGCCG GGCCGGTGG CGGCGACCCGCCGT TCGGATAGCCGACGA TERM 2026 3098357 - 3098323 - G 79 -19.3 -2.50988 | overlap 3098322 3098320 CGACACGACGAATAT CGGCGGGCCGCCG GGCCGGTGG CGGCGACCCGCCG TTCGGATAGCCGACG Caul_2856 3099156 - 3099923 + | short-chain dehydrogenase/reductase SDR Caul_2857 3100544 - 3100068 - | heat shock protein Hsp20 Caul_2858 3101205 - 3102356 + | AraC family transcriptional regulator Caul_2859 3102719 - 3105427 + | TonB-dependent receptor TERM 2027 3105500 - 3105461 - f 86 -15.1 -3.54459 | CGAACGGCCGCCAAA GT-CCGCGGGAGCTTGCGA GTGA TCGCC-GCTCCCGCGGCAC GGCGCGCCTGACCGC Caul_2860 3105588 - 3107195 + | AMP-dependent synthetase and ligase TERM 2028 3107563 - 3107597 + G 74 -10.7 -3.72576 | gap 2 CTGCCCATTTCGACG CTCGGCGCGGCGCTGTC GCC GG-AGCGCCG-GCCGCG TTTCCTGGGCGCGCA Caul_2861 3107176 - 3108042 + | 3-hydroxybutyryl-CoA dehydrogenase Caul_2862 3108039 - 3109385 + | major facilitator transporter Caul_2863 3109385 - 3111046 + | carboxylesterase type B Caul_2864 3111826 - 3111311 - | cupin 2 domain-containing protein Caul_2865 3112333 - 3111926 - | antibiotic biosynthesis monooxygenase TERM 2029 3112472 - 3112418 - R 72 -11.7 -3.28712 | gap 1, opp_overlap 3112460, overlap 3112460 3112461 CTCGCCCTTCGACAA GCTCAGGATGAGGACCTCCTCATG GGCCTCAG CATTAGAAAA-CCTCATCCTGAGC CTGTCGAAGGACGAG TERM 2030 3112488 - 3112460 - R 71 -5.2 -4.4891 | opp_overlap 3112460, overlap 3112418 3112461 CTCAGCATTAGAAAA CCTCATCCTGAG CCTGT CGAAGGACGAGG TTTTCGCACTGGGGG Caul_2866 3112898 - 3112521 - | proteinase inhibitor I1 Kazal Caul_2867 3113058 - 3115181 + | DNA topoisomerase IV subunit B Caul_2868 3116497 - 3115943 - | TetR family transcriptional regulator Caul_2869 3116676 - 3117428 + | short-chain dehydrogenase/reductase SDR Caul_2870 3118011 - 3117523 - | pantetheine-phosphate adenylyltransferase Caul_2871 3120820 - 3118052 - | DNA gyrase subunit A TERM 2031 3120760 - 3120803 + g 78 -8.6 -4.3129 | gap 1, overlap 3120763 3120764 TATTGATGGGGGTAA CGTC-CCCGCGGGACGCCGGC GAA GCCGGGGACCCGGGGATGGTG TTTTGATCGTCGCTC Caul_2872 3120944 - 3121453 + | superoxide dismutase copper/zinc binding Caul_2873 3122542 - 3121646 - | hypothetical protein TERM 2032 3122441 - 3122465 + g 78 -13.5 -3.61398 | CATCGGCGGCAGCTC CGCCGTCGCCA CCT TGGCCGCGGCG TTGTTGAGGCCCCAG Caul_2874 3123841 - 3122555 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 2033 3122996 - 3122972 - G 76 -14.3 -3.40522 | overlap 3122983 ATCGTCCGACCAGAA CGCCTCGAACA CCC TGGTCGAGGCG ACCGCCGCCGACAGC TERM 2034 3123236 - 3123197 - G 72 -9.2 -4.00042 | gap 1 CGGCGCATGAAACAA CATGCCGCCCGCGCC-CTG GAC CAGCGGCTCGGTCAGGATG GCGGCGATCTCTCCG Caul_2875 3123916 - 3125067 + | 8-amino-7-oxononanoate synthase Caul_2876 3125067 - 3125759 + | dethiobiotin synthase TERM 2035 3125924 - 3125956 + G 80 -16.1 -3.14132 | CTGCACGCCGATCTC GACGCCGCCCTGGCC CGG GGCCTGGACGGCGCC TTCGTCCACGCGGCC Caul_2877 3125756 - 3126649 + | oxidoreductase domain-containing protein Caul_2878 3127786 - 3126692 - | fatty acid desaturase TERM 2036 3128073 - 3128100 + r 76 -12.7 -3.4252 | opp_overlap 3128074, overlap 3128074 TAGGCGGCATGAAAA ACGGCCAGTCC CGCGAA GGACTGGCCGC TTGTCGTCAGTCGAG TERM 2037 3128074 - 3128099 + r 80 -16.2 -2.65298 | opp_overlap 3128074, overlap 3128073 AGGCGGCATGAAAAA CGGCCAGTCC CGCGAA GGACTGGCCG CTTGTCGTCAGTCGA TERM 2038 3128099 - 3128074 - R 100 -16.9 -4.7254 | opp_overlap 3128073 3128074 AGGCGGCATGAAAAA CGGCCAGTCCC GCGA AGGACTGGCCG CTTGTCGTCAGTCGA Caul_2879 3128627 - 3128130 - | single-strand binding protein Caul_2880 3129153 - 3128767 - | hypothetical protein Caul_2881 3129846 - 3129175 - | hypothetical protein Caul_2882 3132791 - 3129939 - | regulatory protein FlaEY TERM 2039 3131195 - 3131220 + g 74 -13.3 -3.35679 | overlap 3131188 CCTGCGAGCCGTTGA CGACGATGCCG GCGA CGGTGTCGTCG TTCTCGCTGCCGAAA Caul_2883 3133426 - 3132872 - | GCN5-related N-acetyltransferase Caul_2884 3134325 - 3133486 - | flagellin domain-containing protein Caul_2885 3134834 - 3134499 - | hypothetical protein TERM 2040 3134806 - 3134820 + g 82 -4.2 -5.00138 | GGCTCTGGCACGGTA GGTTGC AAA GCGATC TTTTTGGTTTCCATA TERM 2041 3134935 - 3134906 - R 85 -14.9 -3.65902 | opp_overlap 3134909 CTTACCGGAGCGAAA GGCGGGGCGGACC CGAG GGTCCGCCCCTTC TCGTTCCTATCGGAA TERM 2042 3134909 - 3134932 + r 100 -19.6 -3.55487 | opp_overlap 3134906 ACCGGAGCGAAAGGC GGGGCGGACC CGAG GGTCCGCCCC TTCTCGTTCCTATCG Caul_2886 3135763 - 3134942 - | flagellin domain-containing protein TERM 2043 3136058 - 3136024 - R 100 -11.5 -5.75342 | gap 1, opp_overlap 3136029, overlap 3136028 3136029 CGGGGCCAAAAAAAA GAAATGCCGGACGGCC CTTG GACCGTCCGGC-TTTG ATCGCTTCTTGAAGC TERM 2044 3136055 - 3136028 - R 100 -14.8 -5.33985 | opp_overlap 3136029, overlap 3136024 3136029 GCCAAAAAAAAGAAA TGCCGGACGGCC CTTG GACCGTCCGGCT TTGATCGCTTCTTGA TERM 2045 3136054 - 3136029 - R 100 -18.3 -3.77951 | opp_overlap 3136029, overlap 3136028 3136024 CCAAAAAAAAGAAAT GCCGGACGGCC CTTG GACCGTCCGGC TTTGATCGCTTCTTG TERM 2046 3136029 - 3136054 + r 100 -16.9 -3.81929 | gap 1, opp_overlap 3136029 3136028 3136024 CCAAAAAAAAGAAAT GCCGGACGG-CC CTT GGACCGTCCGGC TTTGATCGCTTCTTG Caul_2887 3136903 - 3136085 - | flagellin domain-containing protein TERM 2047 3137062 - 3137100 + r 73 -8.7 -4.07687 | opp_overlap 3137066, overlap 3137063 CGTCGCCGCGAACGC AAAACCGCCCGGCGAAT GCAGA ATTCGCCGGGCGGCAGG TTTTACCGGAAAGGT TERM 2048 3137096 - 3137066 - R 100 -22.7 -4.27316 | opp_overlap 3137063 3137062 GCCGCGAACGCAAAA CCGCCCGGCGAAT GCAGA ATTCGCCGGGCGG CAGGTTTTACCGGAA Caul_2888 3137512 - 3137150 - | flagellar biosynthesis regulatory protein FlaF Caul_2889 3137897 - 3137502 - | flagellar biosynthesis repressor FlbT Caul_2890 3138082 - 3139881 + | TPR repeat-containing protein Caul_2891 3139968 - 3140687 + | acylneuraminate cytidylyltransferase Caul_2892 3140684 - 3141277 + | GCN5-related N-acetyltransferase TERM 2049 3141382 - 3141335 - f 100 -26.6 -4.66537 | gap 1, overlap 3141337 TGCGTCAAGACAAAA GACTAGAGCGTTCCCGGCCTGAT GCA ATCAGGTCGGGAACGCTCTAG-C AGCCTTCACCGGAAA TERM 2050 3141381 - 3141337 - f 100 -30.3 -3.94773 | overlap 3141335 CGTCAAGACAAAAGA CTAGAGCGTTCCCGGCCTGAT GCA ATCAGGTCGGGAACGCTCTAG CAGCCTTCACCGGAA TERM 2051 3141434 - 3141464 + F 76 -8.8 -4.14392 | overlap 3141440 3141445 GCGACGGGTTGAATC GGGATCGCGAGGGC GCC GCCCGCGCCTTTCC TTTTCGACCTTGAAG TERM 2052 3141440 - 3141458 + F 70 -11.6 -3.11359 | overlap 3141434 3141445 GGTTGAATCGGGATC GCGAGGGC GCC GCCCGCGC CTTTCCTTTTCGACC TERM 2053 3141445 - 3141459 + F 76 -8.5 -4.20136 | overlap 3141440 3141434 AATCGGGATCGCGAG GGCGC CGCCC GCGCC TTTCCTTTTCGACCT Caul_2893 3141490 - 3141867 + | hypothetical protein TERM 2054 3142643 - 3142661 + G 72 -3.8 -4.63089 | gap 1 ACGAGAAGGAACTGC CGGACGC CTTCCT GCG-CCG TTGTTTTTTCCACTA Caul_2894 3142144 - 3143013 + | ATPase TERM 2055 3143466 - 3143413 - g 77 -14.6 -3.14344 | gap 3, overlap 3143465 GATGCCGGCGATGAA GGC-CGCTCCGC-CGCCGCCCA-CGCC TCC GGCGCTGGGGGGCAAGCCGAGCAAGCC GCGCGGCGAAGGCGC Caul_2895 3143093 - 3143950 + | hypothetical protein Caul_2896 3144467 - 3144096 - | hypothetical protein TERM 2056 3144528 - 3144510 - R 82 -14.6 -3.27994 | opp_overlap 3144512, overlap 3144500 CTAATGCGACAGGAA CAGCGACG GTC CGTCGCTG TTGAGCAGGGTGCGG Caul_2897 3145307 - 3144495 - | UspA domain-containing protein Caul_2898 3145519 - 3146115 + | metal dependent phosphohydrolase Caul_2899 3146112 - 3147119 + | hypothetical protein Caul_2900 3147761 - 3147327 - | hypothetical protein Caul_2901 3148783 - 3147803 - | fatty acid hydroxylase TERM 2057 3148204 - 3148259 + g 74 -11.8 -3.7282 | gap 1, opp_overlap 3148237, overlap 3148207 3148208 GGGCGTTGCGGGCGT GGTGCACCCGGTGGTGCGACGGGGTGT TGA ACACCGCCTCGAACCATCGCG-GCGTC TTGTTGATCGCCTCG TERM 2058 3148208 - 3148257 + g 73 -12.1 -3.44552 | gap 1, opp_overlap 3148237, overlap 3148207 3148204 GTTGCGGGCGTGGTG CACC-CGGTGGTGCGACGGGGTGT TGA ACACCGCCTCGAACCATCGCGGCG TCTTGTTGATCGCCT Caul_2902 3149181 - 3148780 - | hypothetical protein TERM 2059 3149301 - 3149267 - R 100 -16.4 -4.11394 | opp_overlap 3149273, overlap 3149268 AGGTCACCCCGAAAA CGGGAAGCGCGCCTCC GAC GGAGACGCGCTTCCTT CAGGTCCTTGACGCT TERM 2060 3149300 - 3149268 - R 93 -19.9 -3.06515 | opp_overlap 3149273, overlap 3149267 GGTCACCCCGAAAAC GGGAAGCGCGCCTCC GAC GGAGACGCGCTTCCT TCAGGTCCTTGACGC TERM 2061 3149273 - 3149295 + r 82 -14.8 -3.36557 | opp_overlap 3149268 3149267 CCCCGAAAACGGGAA GCGCGCCTCC GAC GGAGACGCGC TTCCTTCAGGTCCTT Caul_2903 3149846 - 3149322 - | hypothetical protein TERM 2062 3150139 - 3150107 - H 77 -14.8 -2.87548 | overlap 3150097 AACAAGATCATGAGA CGCGCCCCGCCACC TTGTC GGTGGGAAGGCGCG CCAGCGTCATCGGGA Caul_2904 3150163 - 3151278 + | 3-oxoacyl-(acyl carrier protein) synthase III Caul_2905 3151696 - 3151286 - | hypothetical protein Caul_2906 3151935 - 3151693 - | hypothetical protein TERM 2063 3151862 - 3151901 + g 78 -18 -2.79831 | gap 1 TCCTCCGTTGAAGTC GCGTGATCGGC-CGCTCGG CGC TTGAGCGCGTCGATCACGC TGTCATCGAGATTGC Caul_2907 3153163 - 3151982 - | peptidase M48 Ste24p TERM 2064 3152697 - 3152683 - G 76 -7.1 -4.32034 | CCAGCACCATCAAAA CGGTG ATGAA CACCG CCGTCAGCCCGCCGC TERM 2065 3153146 - 3153128 - G 80 -17.4 -2.87344 | CAGTTGCGCCAGATA GGCCGCCG TGG CGGCGGCC GGATCGAACAGAGCC Caul_2908 3153337 - 3154134 + | cystine transporter subunit TERM 2066 3154232 - 3154249 + F 77 -14.1 -3.30124 | overlap 3154222 CGGTCCCGGATCTGC GCCCGGC TTTC GCCGGGC TTGTCCGGGATGACA Caul_2909 3154287 - 3154943 + | polar amino acid ABC transporter, inner membrane subunit Caul_2910 3154940 - 3155680 + | ABC transporter related Caul_2911 3155744 - 3156046 + | hypothetical protein Caul_2912 3156199 - 3158274 + | DEAD/DEAH box helicase domain-containing protein Caul_2913 3158308 - 3159285 + | aminoglycoside phosphotransferase Caul_2914 3159282 - 3159647 + | hypothetical protein Caul_2915 3160946 - 3159813 - | hypothetical protein TERM 2067 3160745 - 3160713 - G 71 -9.8 -3.71848 | GGGGTGCACGAAGAA CACGTCGGCCG-CGCC CTT GGCGACGGCCT-CGCG CTGGGGCCGCAACGC Caul_2916 3162200 - 3160998 - | acetyl-CoA acetyltransferase Caul_2917 3163698 - 3162211 - | hypothetical protein Caul_2918 3164904 - 3163903 - | ADP-L-glycero-D-manno-heptose-6-epimerase Caul_2919 3164981 - 3166417 + | deoxyribodipyrimidine photo-lyase Caul_2920 3166505 - 3167740 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 2068 3167932 - 3167875 - g 73 -16.9 -2.64616 | gap 1, opp_overlap 3167912 GCGGCACCTATATCA CCCAGTTCGAGGC-GGAGGCGCCGACCG ACG CGGTCGCCGCCTGGTGCCGCGAGCTGGA GGAAGAACAGCTGCT Caul_2921 3167826 - 3168107 + | hypothetical protein TERM 2069 3168864 - 3168852 - g 78 -9.1 -4.28432 | AACCGGAAGTGAAAA TCGGC CTG GCCGA CCCGCACGGCGCGGC Caul_2922 3168224 - 3169234 + | cysteine synthase A Caul_2923 3169344 - 3169916 + | N-acetylmuramoyl-L-alanine amidase Caul_2924 3170906 - 3169968 - | transposase IS116/IS110/IS902 family protein Caul_2925 3171287 - 3172138 + | rhodanese domain-containing protein Caul_2926 3172386 - 3173552 + | cystathionine beta-lyase Caul_2927 3173760 - 3174302 + | hypothetical protein Caul_2928 3174396 - 3174764 + | CopY family transcriptional regulator TERM 2070 3175639 - 3175591 - g 70 -12.2 -3.34895 | gap 1, opp_overlap 3175610, overlap 3175594 GTCATGCTGAAGGAA CACCGCCAGGGCCG-CGCCCGCC GCCT GGCCGGCGGCGGCGCCGTCGCCG CCCTGGGCCTGGCCG TERM 2071 3175610 - 3175655 + G 82 -19.5 -2.53581 | opp_overlap 3175594 3175591 GCCAGGGCCGCGCCC GCCGCCTGGCCGGCGGCGGCG CCGT CGCCGCCCTGGGCCTGGCCGC TGGCTTCGCCGTCTG Caul_2929 3174754 - 3176526 + | peptidase M56 BlaR1 Caul_2930 3176569 - 3178125 + | glucose-methanol-choline oxidoreductase Caul_2931 3178122 - 3178472 + | hypothetical protein TERM 2072 3178519 - 3178565 + T 93 -18.6 -3.19371 | AGCGCGCAGCGCGCC GATCCGGGACCGACGCTGGAGC TCG GCGCTTCCGGCGGTCCCGGATC TTCGCTTCGCTACGT Caul_2932 3179909 - 3178575 - | hypothetical protein Caul_2933 3180094 - 3181656 + | hypothetical protein Caul_2934 3181653 - 3182696 + | hypothetical protein TERM 2073 3182788 - 3182772 - g 79 -15.1 -3.28924 | CACGCGCGCCGAGAA GCGCCGC GCC GCGGCGC GTCGCGTGGTCGCTA TERM 2074 3182988 - 3182948 - g 71 -11.2 -3.61398 | gap 2 CGGCGTGGTCAACAA CCTGGCCGCCGACGTCACCG ACT CGGTGA--TCGACAGCCTGG CGCCCAGTCGGACCG Caul_2935 3182724 - 3183320 + | hypothetical protein TERM 2075 3183344 - 3183366 + T 93 -14.9 -4.06055 | opp_overlap 3183343 3183342 3183341 CAGAGATCAAAAGCG GGGCCATGC AACCG GCATGGCCC TTTGCTTTGCCACCT Caul_2936 3184361 - 3183423 - | transposase IS116/IS110/IS902 family protein Caul_2937 3186796 - 3184661 - | glucose-methanol-choline oxidoreductase TERM 2076 3187450 - 3187491 + G 71 -9.9 -3.78934 | gap 1, overlap 3187465 GCCGCCCCGGCCGCC GCCGGCCTGGTC-CTCGCCG GCC CCGAGGGCGCCCTGGCCGGC TTCTTCTGGGGCGGA Caul_2938 3186928 - 3187815 + | stearoyl-CoA 9-desaturase Caul_2939 3189414 - 3187801 - | hypothetical protein TERM 2077 3189341 - 3189304 - G 71 -2.5 -4.65895 | gap 1, overlap 3189305 CTCGCGACCGAAAAA TCGCC-CGAAGCGGCGGC GGA GCAGCAGGCTGGCGGCGA AGGAGACGTGGCCGA Caul_2940 3189722 - 3189411 - | phosphopantetheine-binding Caul_2941 3189898 - 3190926 + | fatty acid desaturase Caul_2942 3190923 - 3191444 + | hypothetical protein Caul_2943 3191441 - 3192643 + | aminotransferase class I and II Caul_2944 3192640 - 3193515 + | short-chain dehydrogenase/reductase SDR Caul_2945 3193512 - 3193790 + | phosphopantetheine-binding Caul_2946 3193774 - 3196647 + | aminotransferase class-III Caul_2947 3196644 - 3198839 + | molydopterin dinucleotide-binding region Caul_2948 3198848 - 3200098 + | acyl-CoA dehydrogenase domain-containing protein TERM 2078 3200419 - 3200455 + G 87 -17.2 -3.28712 | opp_overlap 3200419, overlap 3200421 CTCCGGCAAGTACAA CCCCGCCACCGCCCTG ACCGA CGGGGCGCTGGCGGTG TTCTCCAAGGAGCGC TERM 2079 3200455 - 3200419 - g 82 -15 -3.50853 | opp_overlap 3200419 3200421 CTCCGGCAAGTACAA CCCCGCCACCGCCCTG ACCGA CGGGGCGCTGGCGGTG TTCTCCAAGGAGCGC TERM 2080 3200421 - 3200453 + G 86 -18.4 -3.21276 | opp_overlap 3200419, overlap 3200419 CCGGCAAGTACAACC CCGCCACCGCCCTG ACCGA CGGGGCGCTGGCGG TGTTCTCCAAGGAGC Caul_2949 3200144 - 3200521 + | hypothetical protein Caul_2950 3200527 - 3201867 + | amino acid permease-associated region TERM 2081 3202119 - 3202149 + G 75 -16.1 -2.87132 | gap 1, overlap 3202148 ATCGCGTTCCTCGGG GCGGTGCGGGC-CG GGAT CGCGCCCGCCCCGC TCTATCCGCCGCCGC Caul_2951 3201864 - 3203597 + | AMP-dependent synthetase and ligase Caul_2952 3203594 - 3204679 + | fatty acid desaturase Caul_2953 3205552 - 3204791 - | uroporphyrin-III C-methyltransferase Caul_2954 3208250 - 3205545 - | molybdopterin oxidoreductase Caul_2955 3208597 - 3208250 - | nitrite reductase (NAD(P)H), small subunit Caul_2956 3211050 - 3208594 - | nitrite reductase (NAD(P)H), large subunit Caul_2957 3212299 - 3211079 - | major facilitator transporter Caul_2958 3213717 - 3212569 - | nitrate transporter Caul_2959 3214292 - 3213714 - | response regulator receiver/ANTAR domain-containing protein Caul_2960 3214742 - 3215791 + | putrescine carbamoyltransferase Caul_2961 3215795 - 3217240 + | amino acid permease-associated region Caul_2962 3217237 - 3218361 + | agmatine deiminase Caul_2963 3218363 - 3219265 + | carbamate kinase TERM 2082 3219326 - 3219340 + T 78 -3.4 -5.07652 | ACCTGATTGCATCAG GCCGGG GCT CTAGGC TTTTGTTTTAACGCA Caul_2964 3221341 - 3219398 - | PAS/PAC sensor hybrid histidine kinase TERM 2083 3221279 - 3221245 - G 70 -3.4 -4.4261 | opp_overlap 3221256, overlap 3221248 3221249 CGCTGAACATCAAAA CCACGCCACGTTCGTC GGT GACGATGATGGCTTCG GACGAGATTTTTAGA Caul_2965 3221518 - 3221973 + | hypothetical protein Caul_2966 3222319 - 3222053 - | hypothetical protein Caul_2967 3222883 - 3222440 - | response regulator receiver protein Caul_2968 3223567 - 3222944 - | two component LuxR family transcriptional regulator TERM 2084 3223166 - 3223193 + g 74 -14.8 -3.03771 | gap 1 CGCCACCGCGGCGTC CGCCGCCCGGGCG GCG CGCCCGT-CGGCG TCTTCCAGCCTCTCG Caul_2969 3225464 - 3223560 - | multi-sensor signal transduction histidine kinase TERM 2085 3224435 - 3224397 - G 74 -13.1 -3.60296 | opp_overlap 3224400 3224401 CAGTTCCATCGGAAA GGTCGCGCCGTCGCG CTTTAGGCC CACGACGACGCGCCC GATGCCGATGATCCG TERM 2086 3224582 - 3224567 - G 84 -7.5 -4.70659 | overlap 3224569 CCGCATAGCCAAAAA GCCGC TCGGCC GCGGC GCTGAACGACAGGAT Caul_2970 3226732 - 3225704 - | hypothetical protein TERM 2087 3226156 - 3226133 - G 73 -10.3 -3.86015 | gap 1, overlap 3226134 CAGGCGCTCGAGAAA CGCCGGCAGC GGCCG GCTGCCG-CG CCGCCTCAACCATAG Caul_2971 3228500 - 3226716 - | poly-beta-hydroxybutyrate polymerase domain-containing protein TERM 2088 3226912 - 3226959 + g 70 -12.6 -3.28924 | gap 1 GCGGGTCGGGTGCGA CGCCGCCAATGGCGTCCGGGTCG ACC CGGCTCGGA-GACGATGCCGGCG TTATGCCCGCCGCTG TERM 2089 3227058 - 3227029 - G 77 -15.7 -3.18728 | gap 1 ATCTTGAACACCGAA CGCCAGGGCGCGAC GTG GTCGCGCTC-GGCG CCGACCGCGAACACG Caul_2972 3228662 - 3229375 + | hypothetical protein TERM 2090 3230823 - 3230833 + G 72 -6.8 -4.33767 | TGGCGAAGATGGCGA CCAG GGG CTGG TTTTCCTGGGTTTCT TERM 2091 3231184 - 3231159 - g 72 -13.9 -3.16564 | CGGCGACGGGATCAA CGACGCCCCGG CGAT CCGGGCCGCCG ATGTCGGCCTGTCGG TERM 2092 3231861 - 3231892 + G 74 -14.4 -3.27298 | overlap 3231878 CGCCTATCTGCTCTG CGCCGAGGTCTTGA AGCG TCACGCCCTCGGCG TTCCTGGTTAGAGCG Caul_2973 3229372 - 3231903 + | magnesium-translocating P-type ATPase TERM 2093 3232001 - 3231974 - T 100 -14.8 -4.69053 | opp_overlap 3231974 3231964 3231975, overlap 3231975 GAGCATTCAAGAAAA TGGCCGGTCGAG CTTG CCCGACCGGCCC TTGTTCTCGCCTTTC TERM 2094 3231974 - 3232001 + T 83 -12.6 -3.83262 | opp_overlap 3231974 3231975, overlap 3231964 3231975 GAGCATTCAAGAAAA TGGCCGGTCGAG CTTG CCCGACCGGCCC TTGTTCTCGCCTTTC TERM 2095 3232000 - 3231975 - T 95 -18.3 -3.40709 | opp_overlap 3231975 3231974 3231964, overlap 3231974 AGCATTCAAGAAAAT GGCCGGTCGAG CTTG CCCGACCGGCC CTTGTTCTCGCCTTT TERM 2096 3231975 - 3232000 + T 83 -16.1 -2.89234 | opp_overlap 3231974 3231975, overlap 3231974 3231964 AGCATTCAAGAAAAT GGCCGGTCGAG CTTG CCCGACCGGCC CTTGTTCTCGCCTTT Caul_2974 3232845 - 3232045 - | UspA domain-containing protein TERM 2097 3233396 - 3233371 - g 82 -11.1 -4.18018 | gap 1 GTTCGGCATGGAAAA CGGCC-CGGTCC ATC GGACGGCGGCCG AGGCGCTCGGCGACG Caul_2975 3233120 - 3233782 + | Crp/FNR family transcriptional regulator TERM 2098 3233906 - 3233941 + T 100 -28.4 -3.76492 | GTGGAGGATGGCGGA GAGCGCCGCCCGTCCG CACG TGGACGGGCGGCGCTC TTTGCTCCCGTTCGC Caul_2976 3234421 - 3233966 - | hypothetical protein TERM 2099 3234415 - 3234425 + g 70 -3.2 -4.4009 | GTCGGTGATGAATCT TGAC CAT GTCG TTTTCTCCGATGCGC TERM 2100 3234683 - 3234712 + G 74 -12.8 -3.65351 | gap 1, opp_overlap 3234676, overlap 3234683 CCAGCACAGCCCCAG CCC-CTCGGGCCG CCGCC CGGCCCGTGTGGG TTTGGCTGGCCATCG TERM 2101 3235265 - 3235249 - g 70 -9.4 -3.83026 | CTGGCCGACACCAAA GCGGTG CGCGT CACCGC CGACGTCGATGAGCG TERM 2102 3235376 - 3235397 + G 70 -12.9 -3.26031 | opp_overlap 3235373, overlap 3235374 3235371 TCGCCCAGATCACCC CGGCCGGCG ACGC CACCGGCCG TGTGTTTCGCGTCCG Caul_2977 3234496 - 3235701 + | RND family efflux transporter MFP subunit Caul_2978 3235698 - 3236957 + | hypothetical protein Caul_2979 3236954 - 3237634 + | ABC transporter related Caul_2980 3237783 - 3238352 + | nitroreductase TERM 2103 3239817 - 3239852 + G 73 -16.2 -2.62983 | TGCTGGGCTGGGCGG CCATGGCGATCATGGC CCTG GCCACGATCGCCATGC TGATCTGGCGCTAGA Caul_2981 3238595 - 3239866 + | putative manganese transport protein TERM 2104 3239969 - 3239922 - T 100 -20.8 -4.18164 | gap 1, opp_overlap 3239932 3239967, overlap 3239924 3239925 AATGCGTTAAAACAA GAGC-CTAGAACCCCGACCTGAT GCT ATCAGGTCGGGGTTCTAGCGGGC GCGTCGCGCGTCTTT TERM 2105 3239965 - 3239924 - T 100 -25.5 -3.68435 | gap 1, opp_overlap 3239932, overlap 3239922 3239925 TGCGTTAAAACAAGA GCCTAGAACCCCGACCTGAT GCT ATCAGGTCGGGGTTCTAG-C GGGCGCGTCGCGCGT TERM 2106 3239965 - 3239925 - T 100 -25.7 -2.80579 | opp_overlap 3239932, overlap 3239924 3239922 GCGTTAAAACAAGAG CCTAGAACCCCGACCTGAT GCT ATCAGGTCGGGGTTCTAGC GGGCGCGTCGCGCGT TERM 2107 3239932 - 3239958 + T 95 -21 -3.28791 | opp_overlap 3239924 3239925 3239922 AACAAGAGCCTAGAA CCCCGACCTGAT GCT ATCAGGTCGGGG TTCTAGCGGGCGCGT TERM 2108 3239967 - 3239981 + T 71 -9.2 -3.73224 | opp_overlap 3239922 GTCGGGGTTCTAGCG GGCGCG TCG CGCGTC TTTAATGCGAGATCA Caul_2982 3240822 - 3239983 - | UspA domain-containing protein TERM 2109 3240385 - 3240345 - G 72 -13.2 -3.14602 | gap 1, overlap 3240343 TCCAGGCGATCAAGA CCCGCTGGCCGACGGCGGA GATC TCCGCCGTCT-CCGGCGTG ACCAGCACGGGACCG TERM 2110 3241719 - 3241697 - g 82 -11.2 -4.11216 | opp_overlap 3241696 CCGCGACCGCGAAAA CGCCCAGCCG GAA CGGCTAGCCG ATTACCTCCGGCTGC Caul_2983 3241080 - 3241937 + | UspA domain-containing protein TERM 2111 3242519 - 3242473 - g 78 -14.3 -3.54424 | gap 1, opp_overlap 3242453 3242471 3242508, overlap 3242452 CCGGACTGCGCCAAA CCGAGGCGGCGGGCGC-GGCCA AGCT TGGTCTACGCCCCCCGTCCCGG GCGTTGTTTGCGCGC Caul_2984 3241956 - 3242993 + | hypothetical protein Caul_2985 3244359 - 3243034 - | hypothetical protein Caul_2986 3245178 - 3244462 - | GntR family transcriptional regulator Caul_2987 3245363 - 3247489 + | phospholipase C, phosphocholine-specific Caul_2988 3247522 - 3248103 + | hypothetical protein TERM 2112 3248119 - 3248154 + T 83 -15.3 -3.14211 | overlap 3248122 TCCACCGACGACGGC TGTCCCCGCGTCCCC GACCAG GGGGGCGCGGGGTCC TTGCTAGCGAGGCGT TERM 2113 3248122 - 3248151 + T 90 -20 -2.77899 | overlap 3248119 ACCGACGACGGCTGT CCCCGCGTCCCC GACCAG GGGGGCGCGGGG TCCTTGCTAGCGAGG Caul_2989 3248970 - 3248158 - | phosphonoacetaldehyde hydrolase Caul_2990 3250100 - 3248967 - | FAD dependent oxidoreductase Caul_2991 3251080 - 3250106 - | aspartyl/asparaginyl beta-hydroxylase Caul_2992 3252988 - 3251084 - | sulfotransferase TERM 2114 3252996 - 3252969 - G 78 -9.8 -4.24342 | gap 1 GCCTCTAGCAATAAA GCGTCGCGGCCGA TGT TCA-CCGCGCCGC CCCCGTGCGCAGCAA Caul_2993 3253614 - 3252985 - | hypothetical protein Caul_2994 3254249 - 3253611 - | hypothetical protein TERM 2115 3253927 - 3253911 - G 73 -7.9 -4.1891 | overlap 3253915 CGCGCCGAACAGAAA GTGACGC ATC GCGTCGC GCGGCCGCTGCTGGA TERM 2116 3254299 - 3254270 - R 100 -17.1 -4.26589 | opp_overlap 3254268, overlap 3254263 3254271 AGGACACACGGAAAA GGCGCCCCCTCCC GGGA GGGAGGAGGCGCG CAGTCTATCAGGATC TERM 2117 3254298 - 3254271 - R 95 -20.6 -3.15231 | opp_overlap 3254268, overlap 3254263 3254270 GGACACACGGAAAAG GCGCCCCCTCCC GGGA GGGAGGAGGCGC GCAGTCTATCAGGAT Caul_2995 3257123 - 3254322 - | TonB-dependent receptor TERM 2118 3257297 - 3257258 - R 85 -14.2 -3.60475 | gap 1, opp_overlap 3257257, overlap 3257263 AATTGGGACCGTAAA CAGCAGCCGGCCGG-GGCG TTC CCCCGCCGGCGAGCCGCTG TTCGGGTAAGAGCTC TERM 2119 3257288 - 3257263 - R 87 -17.5 -2.85297 | opp_overlap 3257257, overlap 3257258 GGACCGTAAACAGCA GCCGGCCGGGG CGTT CCCCCGCCGGC GAGCCGCTGTTCGGG Caul_2996 3259328 - 3257580 - | acid phosphatase TERM 2120 3258407 - 3258429 + g 78 -6.8 -4.57569 | overlap 3258405 3258402 CGCCGCTGGAGAGCG CGGCGGTGCG CAC CGCCACGTCG TTTTTGCGCGCCTGC Caul_2997 3259583 - 3261697 + | phospholipase C, phosphocholine-specific Caul_2998 3263122 - 3261698 - | XRE family transcriptional regulator Caul_2999 3263261 - 3264793 + | carboxyl transferase Caul_3000 3264802 - 3266811 + | carbamoyl-phosphate synthase L chain ATP-binding Caul_3001 3266808 - 3267317 + | MerR family transcriptional regulator Caul_3002 3267664 - 3269070 + | FAD linked oxidase domain-containing protein TERM 2121 3269835 - 3269891 + G 71 -10.8 -3.66844 | gap 2 GCCGAGATGGCCCTG GGCGACCTGGAGGGCGTCGACCTGATGG TCC TCGTCGGGACAGC-CCCTCC-GGTGGCC TTCTTCGCCTATCCC Caul_3003 3269067 - 3270605 + | hypothetical protein TERM 2122 3270685 - 3270660 - f 72 -11.7 -3.35679 | GGTCTTGAGCCAGAA GGGCCGCCTCG ACGT CGTCGCGGCCC TATCCCGCGCCGCAG Caul_3004 3270739 - 3271278 + | putative lipid carrier protein-like protein Caul_3005 3271278 - 3272270 + | peptidase U32 Caul_3006 3272267 - 3273175 + | peptidase U32 TERM 2123 3274151 - 3274161 + G 70 -8.2 -3.8211 | opp_overlap 3274151, overlap 3274129 TGGGTTGGTCGACAA GCCG CCC CGGC TTCTTCTGGCTGGCG Caul_3007 3273172 - 3274374 + | FAD dependent oxidoreductase Caul_3008 3274883 - 3274578 - | ETC complex I subunit region Caul_3009 3275585 - 3275070 - | hypothetical protein Caul_3010 3276302 - 3275697 - | cold-shock DNA-binding domain-containing protein TERM 2124 3276420 - 3276438 + r 81 -11.7 -3.92075 | opp_overlap 3276413 GCCATCAAGCGGCCT CCGCGAC ATTTC GTCGCGG TTTCTAGATCGAAAT Caul_3011 3278566 - 3276749 - | single-stranded-DNA-specific exonuclease RecJ Caul_3012 3278995 - 3280527 + | hemolysin-type calcium-binding region Caul_3013 3281657 - 3280689 - | fructose-1,6-bisphosphatase Caul_3014 3282658 - 3281705 - | fructose 1,6-bisphosphatase II Caul_3015 3284001 - 3282712 - | homoserine dehydrogenase TERM 2125 3282747 - 3282762 + g 72 -4 -4.66163 | gap 1, overlap 3282750 AAAGGCGGGGACGCT CTAGCAC GGC GTGC-AG TTTTTCGATGCGGCT TERM 2126 3283721 - 3283737 + g 72 -9.4 -4.07885 | TTGCCCAGCTTCAAG GCGGCT TCGAC AGCCGC TTTTGCCGGGCCGTC Caul_3016 3285279 - 3284059 - | aminotransferase Caul_3017 3285853 - 3285389 - | hypothetical protein TERM 2127 3285551 - 3285575 + g 75 -10 -4.07568 | gap 1 GCTGAGGGTCCAGGT GCTGG-GCGCG GTGT CGCGCTTCAGC TTTTCGGCGGCCAGC Caul_3018 3285949 - 3287961 + | poly(R)-hydroxyalkanoic acid synthase, class I Caul_3019 3288014 - 3288223 + | hypothetical protein TERM 2128 3288576 - 3288562 - g 77 -4.2 -4.77036 | overlap 3288565 GTGCAGGACGAAAAA GAAGGC CCT GTCTTC CCGGCCATGGTTAAG Caul_3020 3288208 - 3288747 + | HlyD family secretion protein Caul_3021 3288795 - 3289823 + | hypothetical protein Caul_3022 3289990 - 3290253 + | SpoVT/AbrB domain-containing protein Caul_3023 3290250 - 3290636 + | PilT domain-containing protein Caul_3024 3291597 - 3290650 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 2129 3291668 - 3291629 - R 100 -21.6 -3.87967 | opp_overlap 3291634 3291635, overlap 3291635 AGGACAAGAAGACAA GAAAAAGGGCGCTCCGGT CGAA ACCGAAGCGCCCCTTTCC AAACGCGTGAACGAC TERM 2130 3291634 - 3291663 + r 79 -13.5 -3.53444 | opp_overlap 3291629 3291635, overlap 3291635 AAGAAGACAAGAAAA AGGGCGCTCCGGT CGAA ACCGAAGCGCCCC TTTCCAAACGCGTGA TERM 2131 3291662 - 3291635 - R 100 -19.2 -5.31072 | opp_overlap 3291634 3291635, overlap 3291629 AGAAGACAAGAAAAA GGGCGCTCCGGT CGAA ACCGAAGCGCCC CTTTCCAAACGCGTG TERM 2132 3291635 - 3291662 + r 84 -17 -2.71924 | opp_overlap 3291635 3291629, overlap 3291634 AGAAGACAAGAAAAA GGGCGCTCCGGT CGAA ACCGAAGCGCCC CTTTCCAAACGCGTG Caul_3025 3292161 - 3291688 - | 30S ribosomal protein S9 Caul_3026 3292638 - 3292165 - | 50S ribosomal protein L13 TERM 2133 3292849 - 3292802 - R 75 -14.8 -2.82516 | gap 1, opp_overlap 3292781 3292802, overlap 3292775 TGCGGTATCATGATA CCGCGCGCAATCTCCTCACCCGT GAA ACGGGGGAGGAGAG-GAGCGCGC CCTACTTCGCCGCCT Caul_3027 3294356 - 3292851 - | alkaline phosphatase TERM 2134 3293904 - 3293940 + g 74 -10.7 -3.67843 | overlap 3293893 3293909 GGCCTCGGTGGCGCA GACCTCCGGCTTGGCCG CGC CGGTCAGGCCGATGATC TTGTTGCGGGTTTTC TERM 2135 3294396 - 3294363 - R 73 -11.1 -3.59979 | gap 1, opp_overlap 3294363, overlap 3294375 GCGGGTCACGGGAAA CTCCAGCA-AGAACGT CGC ACGTCCTGTGCTGGCG TTTCGTGACAGTTCT Caul_3028 3295475 - 3294444 - | cytochrome oxidase assembly Caul_3029 3295631 - 3295894 + | transglycosylase-associated protein Caul_3030 3295891 - 3296112 + | hypothetical protein TERM 2136 3296284 - 3296265 - T 100 -16.4 -5.0925 | opp_overlap 3296265 CCTCAAAACGAAAAA GGCCGCCC CGGA GGGCGGCC TTTCCATTCTTCCGG TERM 2137 3296265 - 3296284 + T 95 -16.4 -3.85389 | opp_overlap 3296265 CCTCAAAACGAAAAA GGCCGCCC CGGA GGGCGGCC TTTCCATTCTTCCGG Caul_3031 3296922 - 3296494 - | MerR family transcriptional regulator TERM 2138 3296643 - 3296606 - G 72 -13.3 -3.16564 | gap 1, opp_overlap 3296602 GTCGGAGGCGACGAA TCGGCCGCGC-CGCCGGC CAG GGCGTCGAGCGAGGCCGA GCCGTTGTCGCCCAG Caul_3032 3297239 - 3296937 - | integration host factor, alpha subunit Caul_3033 3298407 - 3297430 - | 3-oxoacyl-(acyl carrier protein) synthase III Caul_3034 3299471 - 3298404 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 2139 3299253 - 3299283 + g 100 -11.1 -4.67982 | gap 2, overlap 3299256 GTTCCACAGGCTGGT GCCCTTGCCCCGGCG CAT CGCCTGGGC--GGGC TTTTCTTCCATCGAG TERM 2140 3299256 - 3299282 + g 76 -13.6 -3.40307 | overlap 3299253 CCACAGGCTGGTGCC CTTGCCCCGGCG CAT CGCCTGGGCGGG CTTTTCTTCCATCGA Caul_3035 3300159 - 3299614 - | hypothetical protein Caul_3036 3300686 - 3300156 - | hypothetical protein Caul_3037 3300807 - 3301295 + | SmpA/OmlA domain-containing protein Caul_3038 3301460 - 3301981 + | response regulator receiver protein Caul_3039 3303775 - 3301991 - | TrkA domain-containing protein TERM 2141 3304135 - 3304100 - g 73 -12.5 -3.40371 | overlap 3304122 CAGCGCATCAACCAA GGCATCCGCACGGGC CAGATC ACCCGTCCGGAGGCC GCCCGCCTGCGCGGC Caul_3040 3303974 - 3304333 + | hypothetical protein TERM 2142 3304346 - 3304399 + T 75 -14.5 -2.79183 | opp_overlap 3304354 3304360, overlap 3304357 TAACGTGCGGTCCGA CTCAGAAATGAAAACGCCCCGGAGG AAAC CCTCCGGGGCGTCGTCATGTCGGGC TCTGATCGAACTCGC TERM 2143 3304391 - 3304354 - T 100 -22.1 -3.91897 | opp_overlap 3304346 3304357, overlap 3304360 GGTCCGACTCAGAAA TGAAAACGCCCCGGAGG AAAC CCTCCGGGGCGTCGTCA TGTCGGGCTCTGATC TERM 2144 3304357 - 3304388 + T 77 -15.8 -2.63301 | opp_overlap 3304354 3304360, overlap 3304346 CCGACTCAGAAATGA AAACGCCCCGGAGG AAAC CCTCCGGGGCGTCG TCATGTCGGGCTCTG TERM 2145 3304385 - 3304360 - T 100 -21.9 -4.62475 | opp_overlap 3304357 3304346, overlap 3304354 ACTCAGAAATGAAAA CGCCCCGGAGG AAAC CCTCCGGGGCG TCGTCATGTCGGGCT Caul_3041 3306700 - 3304562 - | membrane-bound proton-translocating pyrophosphatase TERM 2146 3306007 - 3306050 + g 70 -13 -3.30441 | opp_overlap 3306007, overlap 3306008 3306022 CATAGGTCTCGAACA GGTCGGCGGCCATGCCGGCG CAGT CGCCGACATTGTCGCCCACG TTGTCGGCGATGGTC TERM 2147 3306008 - 3306049 + g 73 -16.5 -2.5805 | opp_overlap 3306007, overlap 3306007 3306022 ATAGGTCTCGAACAG GTCGGCGGCCATGCCGGCG CAGT CGCCGACATTGTCGCCCAC GTTGTCGGCGATGGT TERM 2148 3306646 - 3306627 - G 74 -11.4 -3.72893 | GAGGCCCGTAGCAAA GACGCCGT CTGC ACGGCGCC GTAAAGCACCGCCAG Caul_3042 3307617 - 3307093 - | hypothetical protein Caul_3043 3308743 - 3307670 - | thiamine-monophosphate kinase Caul_3044 3309188 - 3308727 - | transcription antitermination protein NusB Caul_3045 3309646 - 3309185 - | 67-dimethyl-8-ribityllumazine synthase TERM 2149 3309498 - 3309441 - G 71 -9.8 -3.73775 | opp_overlap 3309463 CCCAGCGCCACGAAA CCGTCATAGCGCAC-GCCGACGGGACGG TTGC CCGCCTCTTCGGCCATG-GCGATGGCGG TCGGCAGTTGCATCG Caul_3046 3310238 - 3309765 - | transcriptional regulator NrdR TERM 2150 3310151 - 3310207 + g 78 -13.1 -3.70902 | gap 3, opp_overlap 3310132, overlap 3310157 3310168 CGCATTCGGGGCACA GCCGACGGCGACGGATGGCCGCCCCGTC TTCC GACGGG-CGGCTGTCCTTCACC-T-GGC TTTCCATGTGGCCGC TERM 2151 3310157 - 3310203 + g 77 -17.3 -2.67244 | gap 1, opp_overlap 3310132, overlap 3310151 3310168 CGGGGCACAGCCGAC GGCGACGGATGGCCGCCCCGTC TTCC GACGGG-CGGCTGTCCTTCACC TGGCTTTCCATGTGG Caul_3047 3311574 - 3310270 - | glycine hydroxymethyltransferase Caul_3048 3311775 - 3312206 + | MucR family transcriptional regulator Caul_3049 3313478 - 3312252 - | 5-aminolevulinate synthase Caul_3050 3314555 - 3313659 - | 3-hydroxyisobutyrate dehydrogenase TERM 2152 3314575 - 3314599 + r 77 -13.5 -3.34043 | opp_overlap 3314572, overlap 3314578 3314590 AGGTCTCCCAAATGC GAACCGCGCCT CAT GGGCGCGGCTC TTATGCCGTCGTCAG TERM 2153 3314578 - 3314596 + r 71 -13.8 -2.54 | opp_overlap 3314572, overlap 3314575 3314590 TCTCCCAAATGCGAA CCGCGCCT CAT GGGCGCGG CTCTTATGCCGTCGT Caul_3051 3315529 - 3314726 - | hypothetical protein TERM 2154 3315325 - 3315269 - G 87 -17.2 -3.34715 | opp_overlap 3315297 3315313, overlap 3315257 3315267 GATGCGGGTGAAATA GCCGCCGCCGGGGATCAGGTC-GGCGAC CTT GGCGCCCGGCCTGA-CGCCGGCGAAGGC CAGGGTCTGGCCCGG Caul_3052 3316639 - 3315587 - | enoyl-CoA hydratase/isomerase TERM 2155 3316583 - 3316598 + g 83 -5.4 -4.82901 | gap 1, overlap 3316570 CTGGGGCCGGTTGAG CGTCAGG CGG CC-GACG TTTTTCTGAACGCGG Caul_3053 3317061 - 3316636 - | PilT domain-containing protein TERM 2156 3316698 - 3316664 - G 76 -7 -4.27316 | overlap 3316666 3316667 GCTCTCAAGTCAAAA CACTCGACGCCCGCCA TCT TGGCGACCGTCAACAG GGCCTCGTCGCGCGA Caul_3054 3317333 - 3317058 - | prevent-host-death family protein Caul_3055 3318514 - 3317375 - | acyl-CoA dehydrogenase domain-containing protein Caul_3056 3318725 - 3319156 + | hypothetical protein Caul_3057 3319232 - 3320236 + | delta-aminolevulinic acid dehydratase Caul_3058 3320233 - 3320637 + | NUDIX hydrolase Caul_3059 3320712 - 3320984 + | hypothetical protein TERM 2157 3321512 - 3321494 - T 70 -10.2 -3.57639 | opp_overlap 3321509, overlap 3321492 TAACACCTACAAACA CTCCGGAC GAT GTCCGGCG CTCCGCGACCCTTTC Caul_3060 3322548 - 3321694 - | 6-phosphogluconate dehydrogenase NAD-binding Caul_3061 3322665 - 3323564 + | OmpA/MotB domain-containing protein Caul_3062 3323689 - 3324540 + | arginyl-tRNA-protein transferase Caul_3063 3325319 - 3324549 - | short-chain dehydrogenase/reductase SDR Caul_3064 3326267 - 3325332 - | 2-nitropropane dioxygenase NPD Caul_3065 3327241 - 3326264 - | alcohol dehydrogenase Caul_3066 3328603 - 3327287 - | beta-lactamase TERM 2158 3327701 - 3327731 + g 72 -13.8 -3.24747 | opp_overlap 3327682 3327681 3327700 CGTCGTCGAGACCAG GCCGCCGCCGCCCG AGG CGATCGCCGGCGGC TTGCTGATATCCAGC TERM 2159 3328523 - 3328481 - G 84 -16.4 -3.40403 | gap 2, opp_overlap 3328480 3328479 GCGCTCGGAGGAGAA GCCTTCCGC-ATCC-GGCGC GGCGG GCGCCAGGATCGCGGCAGGC GCTTTGGGCGCACTC Caul_3067 3331649 - 3328938 - | TonB-dependent receptor Caul_3068 3331850 - 3332494 + | TetR family transcriptional regulator Caul_3069 3332734 - 3332510 - | hypothetical protein TERM 2160 3332902 - 3332881 - H 100 -13 -5.47218 | opp_overlap 3332880 3332881 CGCGAGCCAAAAAAA TGCCCGGC GCGAAG GCCGGGCA GTTATTAGGGAGGAA Caul_3070 3333307 - 3333762 + | hypothetical protein Caul_3071 3333759 - 3334181 + | hypothetical protein Caul_3072 3334247 - 3334777 + | GCN5-related N-acetyltransferase Caul_3073 3335286 - 3334774 - | MarR family transcriptional regulator TERM 2161 3335471 - 3335521 + r 74 -4.7 -4.56597 | gap 1, opp_overlap 3335480 3335481 3335482 3335498, overlap 3335476 3335478 3335480 3335481 3335482 GGTAACCATGTGGTT CCAACAAAATG-GGGCTCCGCGAA CAAG TTCGCGGAGCCCGTGTATCTTTCG TTTTTCAACAGAACG TERM 2162 3335476 - 3335516 + r 76 -7.6 -4.32046 | gap 1, opp_overlap 3335480 3335481 3335482 3335498, overlap 3335471 3335478 3335480 3335481 3335482 CCATGTGGTTCCAAC AAAATG-GGGCTCCGCGAA CAAG TTCGCGGAGCCCGTGTATC TTTCGTTTTTCAACA TERM 2163 3335478 - 3335514 + r 74 -10.2 -3.7557 | gap 1, opp_overlap 3335480 3335481 3335482 3335498, overlap 3335476 3335471 3335480 3335481 3335482 ATGTGGTTCCAACAA AATG-GGGCTCCGCGAA CAAG TTCGCGGAGCCCGTGTA TCTTTCGTTTTTCAA TERM 2164 3335480 - 3335512 + r 76 -12.8 -3.44205 | gap 1, opp_overlap 3335480 3335481 3335482 3335498, overlap 3335478 3335476 3335471 3335481 3335482 GTGGTTCCAACAAAA TG-GGGCTCCGCGAA CAAG TTCGCGGAGCCCGTG TATCTTTCGTTTTTC TERM 2165 3335511 - 3335480 - R 100 -14.4 -4.63218 | opp_overlap 3335480 3335478 3335476 3335471 3335481 3335482, overlap 3335481 3335482 3335498 GTGGTTCCAACAAAA TGGGGCTCCGCGAA CAAG TTCGCGGAGCCCGT GTATCTTTCGTTTTT TERM 2166 3335481 - 3335510 + r 93 -17.9 -3.25966 | opp_overlap 3335480 3335481 3335482 3335498, overlap 3335480 3335478 3335476 3335471 3335482 TGGTTCCAACAAAAT GGGGCTCCGCGAA CAAG TTCGCGGAGCCCG TGTATCTTTCGTTTT TERM 2167 3335510 - 3335481 - R 93 -17.9 -3.3761 | opp_overlap 3335481 3335480 3335478 3335476 3335471 3335482, overlap 3335480 3335482 3335498 TGGTTCCAACAAAAT GGGGCTCCGCGAA CAAG TTCGCGGAGCCCG TGTATCTTTCGTTTT TERM 2168 3335509 - 3335482 - R 100 -21.4 -2.62244 | opp_overlap 3335481 3335480 3335478 3335476 3335471 3335482, overlap 3335481 3335480 3335498 GGTTCCAACAAAATG GGGCTCCGCGAA CAAG TTCGCGGAGCCC GTGTATCTTTCGTTT TERM 2169 3335482 - 3335509 + r 100 -21.4 -2.53953 | opp_overlap 3335482 3335481 3335480 3335498, overlap 3335481 3335480 3335478 3335476 3335471 GGTTCCAACAAAATG GGGCTCCGCGAA CAAG TTCGCGGAGCCC GTGTATCTTTCGTTT Caul_3074 3335782 - 3335549 - | hypothetical protein Caul_3075 3336303 - 3335815 - | GcrA cell cycle regulator TERM 2170 3336559 - 3336543 - H 84 -13.7 -3.75115 | opp_overlap 3336554, overlap 3336539 GGGCGAGAAAATGAA TGCGGCG CCG CGCCGCA CAGCTTGCGACATAT Caul_3076 3336595 - 3337092 + | cytochrome c class I Caul_3077 3337111 - 3337473 + | hypothetical protein Caul_3078 3337476 - 3337829 + | hypothetical protein Caul_3079 3340185 - 3337831 - | transketolase central region TERM 2171 3339233 - 3339223 - G 76 -2.4 -4.7373 | overlap 3339224 GTAGGCGATGAAAAA CCGC GGA GCGT CGTCCTGGCTGGCCC Caul_3080 3343338 - 3340201 - | acriflavin resistance protein TERM 2172 3340378 - 3340348 - G 74 -14 -3.30441 | opp_overlap 3340347 3340350 CAGCAGGGTCGAGAA GATCGCGCCGGTGA AGA TCACCGCCCCGATC GTCTTGCGGCTGCCC TERM 2173 3342072 - 3342049 - G 91 -8.8 -5.06451 | gap 1, overlap 3342051 CACGACGGCAAAAAA GACCTGC-CGG GTG CCGCGCAGGGC CGCGACATTGGCCGG TERM 2174 3342070 - 3342051 - G 78 -10 -4.15748 | gap 1, overlap 3342049 CGACGGCAAAAAAGA CCTGC-CGG GTG CCGCGCAGG GCCGCGACATTGGCC Caul_3081 3344453 - 3343338 - | RND family efflux transporter MFP subunit Caul_3082 3345264 - 3344575 - | hypothetical protein TERM 2175 3345298 - 3345354 + r 100 -22.6 -3.57792 | gap 2, opp_overlap 3345311, overlap 3345306 3345309 3345311 GGCGGGGTTGGACAG C-GCGCAAAAGAA-AGCCGTCGCGATCC CGG GGATCGCGACGGCTGTTCGTTTTCGCCG TTTCGGCGTCAATCG TERM 2176 3345306 - 3345345 + r 100 -20.2 -4.17089 | gap 1, opp_overlap 3345311, overlap 3345298 3345309 3345311 TGGACAGCGCGCAAA AGAA-AGCCGTCGCGATCC CGG GGATCGCGACGGCTGTTCG TTTTCGCCGTTTCGG TERM 2177 3345309 - 3345341 + r 100 -22.1 -3.68023 | opp_overlap 3345311, overlap 3345306 3345298 3345311 ACAGCGCGCAAAAGA AAGCCGTCGCGATCC CGG GGATCGCGACGGCTG TTCGTTTTCGCCGTT TERM 2178 3345339 - 3345311 - R 100 -24.7 -4.65263 | opp_overlap 3345311 3345309 3345306 3345298 AGCGCGCAAAAGAAA GCCGTCGCGATCC CGG GGATCGCGACGGC TGTTCGTTTTCGCCG TERM 2179 3345311 - 3345339 + r 100 -24.7 -3.41359 | opp_overlap 3345311, overlap 3345309 3345306 3345298 AGCGCGCAAAAGAAA GCCGTCGCGATCC CGG GGATCGCGACGGC TGTTCGTTTTCGCCG Caul_3083 3346139 - 3345363 - | hypothetical protein Caul_3084 3346270 - 3346941 + | hypothetical protein Caul_3085 3347396 - 3346938 - | SsrA-binding protein Caul_3086 3348376 - 3347396 - | dihydrodipicolinate synthase Caul_3087 3348541 - 3350721 + | lytic transglycosylase catalytic Caul_3088 3351482 - 3350727 - | ABC transporter related Caul_3089 3352465 - 3351479 - | transport system permease protein Caul_3090 3353274 - 3352462 - | iron compound ABC transporter, periplasmic substrate-binding protein TERM 2180 3352815 - 3352792 - G 70 -4.4 -4.52857 | gap 1, overlap 3352793 AGGCGTCAGATAAAA GGCGCTGCGTC CCC GGCCC-GCGCC CGCCGCTCGCGCCAG Caul_3091 3353953 - 3353279 - | TetR family transcriptional regulator TERM 2181 3353503 - 3353522 + g 72 -5.6 -4.41494 | gap 1, overlap 3353506 3353507 AGCAACGGTCGCCCA GCTCGGCGG TGG CCGCCT-GC TTTTCCTTGGAGATC TERM 2182 3353880 - 3353894 + g 72 -4.2 -4.56597 | overlap 3353877 CCCTTGGGCTTGCGC GCCG ACTTGTG CGGC TTTTTCAACGCGACC Caul_3092 3354081 - 3355559 + | hypothetical protein Caul_3093 3355577 - 3356491 + | hypothetical protein Caul_3094 3356494 - 3357282 + | tRNA/rRNA methyltransferase (SpoU) TERM 2183 3357283 - 3357327 + T 82 -15 -3.28924 | gap 1, overlap 3357287 3357325 ACCGTGACCGGCTAG GATG-CGGCTGGGGACAGGCC CACG GGCCTGTCCCCGTCAGTCGTC TTGTCCGGAGACCTA TERM 2184 3357287 - 3357322 + T 81 -16.8 -2.80074 | overlap 3357283 TGACCGGCTAGGATG CGGCTGGGGACAGGCC CACG GGCCTGTCCCCGTCAG TCGTCTTGTCCGGAG Caul_3095 3357771 - 3357340 - | hypothetical protein Caul_3096 3358474 - 3357869 - | exonuclease RNase T and DNA polymerase III Caul_3097 3360967 - 3358589 - | DNA ligase, NAD-dependent TERM 2185 3361129 - 3361165 + H 79 -9.3 -4.20106 | overlap 3361130 GAGCGATTGGGAAGG GTGCGAAGCGCCCGGGC CTC GCCCGGATGATTTGCAG TTTTGAGTACCGTTT TERM 2186 3361130 - 3361164 + H 73 -12.8 -3.11341 | overlap 3361129 AGCGATTGGGAAGGG TGCGAAGCGCCCGGGC CTC GCCCGGATGATTTGCA GTTTTGAGTACCGTT Caul_3098 3361653 - 3362771 + | acyltransferase 3 Caul_3099 3364623 - 3362929 - | DNA repair protein RecN TERM 2187 3363778 - 3363808 + g 81 -12.4 -3.86897 | GGCCTCGACCAGGGC GCGGTCCACCGCCT CGC AGGCGGCGGCCAGC TTTGTGACGGCTGGG TERM 2188 3364742 - 3364716 - R 100 -23.8 -4.54727 | CTTCCGAAACGAAAA CGGGCCGGTCCT CGA AGGACCGGCCCG TCTCAAATCACATTC Caul_3100 3365684 - 3364764 - | outer membrane assembly lipoprotein YfiO TERM 2189 3365105 - 3365121 + g 78 -13.7 -3.66018 | GGAACCGGCCGATGG CGGCCAG GGT CTGGCCG TTCTTCAGATAGTAG Caul_3101 3366779 - 3365883 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 2190 3367316 - 3367345 + G 73 -12.1 -3.53012 | gap 1, overlap 3367317 GGATCGCCAACCTGA AGGCCAGGATGGCG CCG CGCCG-CCTGGCCG TTTCCGAAGGCGGCG TERM 2191 3367317 - 3367344 + G 70 -15.6 -2.71712 | gap 1, overlap 3367316 GATCGCCAACCTGAA GGCCAGGATGGCG CCG CGCCG-CCTGGCC GTTTCCGAAGGCGGC TERM 2192 3367624 - 3367614 - g 71 -2.4 -4.58283 | opp_overlap 3367614 CAAGGGGGCGAAAAA GGCC ACT GGCG TCGTCTTCGACAAGC TERM 2193 3367779 - 3367749 - g 72 -13.2 -3.14132 | overlap 3367776 CGTGGCGCTGATGAA CGGCTTCAACGGCG ACG CGCCGACCAAGCCG TTCGGCGGCGACGAG TERM 2194 3367989 - 3367941 - g 78 -14.3 -3.61715 | overlap 3367928 3367926 GACCTCGGTCAACAA GGCCATGGACTCCCAGCCCGGCG TCT CGCCGGACGGCAAGACCGAGGCC TGGCTGGCCATGAAG Caul_3102 3367069 - 3369171 + | peptidase S9 prolyl oligopeptidase TERM 2195 3369239 - 3369184 - f 79 -11 -3.86822 | TAATGCGCTTATAAA TTGAAGTCGCTCGCCCCCTCCGTTAG TTTG CCTACGGAGGGGGCGGTCATGCTCAA GCTGTTCCAGGCGAT Caul_3103 3369232 - 3370296 + | hypothetical protein Caul_3104 3371121 - 3370381 - | hypothetical protein Caul_3105 3371916 - 3371302 - | hypothetical protein Caul_3106 3372463 - 3372107 - | hypothetical protein Caul_3107 3373413 - 3372463 - | protein-export membrane protein SecF Caul_3108 3375020 - 3373422 - | preprotein translocase subunit SecD TERM 2196 3373675 - 3373626 - G 87 -17.1 -3.28416 | gap 1 CATGATCGAGACCAA CGCCCGGC-GATAGCCGGTGTCGG CCG CCGACATCGGCGATCGGCCCGCCG CCGCCTCGTCGCGCA Caul_3109 3375402 - 3375094 - | preprotein translocase, YajC subunit Caul_3110 3375525 - 3376364 + | hypothetical protein Caul_3111 3376383 - 3376619 + | hypothetical protein TERM 2197 3376726 - 3376691 - T 86 -12.4 -4.13995 | opp_overlap 3376692, overlap 3376692 GTCGCACAAACGAAA GCCGCAGCGACCGGCC CTTC GGCTGATCGCGGCGGT ATCTGTCTTCGCCCC TERM 2198 3376725 - 3376692 - T 81 -15.9 -3.07915 | opp_overlap 3376692, overlap 3376691 TCGCACAAACGAAAG CCGCAGCGACCGGCC CTTC GGCTGATCGCGGCGG TATCTGTCTTCGCCC TERM 2199 3376692 - 3376725 + T 81 -15.9 -3.10493 | opp_overlap 3376691 3376692 TCGCACAAACGAAAG CCGCAGCGACCGGCC CTTC GGCTGATCGCGGCGG TATCTGTCTTCGCCC Caul_3112 3378700 - 3376799 - | peptidase M23B Caul_3113 3379468 - 3378812 - | protein-L-isoaspartate O-methyltransferase Caul_3114 3380277 - 3379468 - | stationary phase survival protein SurE Caul_3115 3381871 - 3380447 - | seryl-tRNA synthetase TERM 2200 3381280 - 3381300 + g 78 -13.3 -3.57144 | opp_overlap 3381263 3381278 GCGGCGGCGAAACCT CGGTGTAGC CGT GCTGCACCG TTTGCAGGTCCAGCA Caul_3116 3382237 - 3382701 + | hypothetical protein TERM 2201 3382810 - 3382780 - T 100 -19.1 -4.34263 | gap 1, opp_overlap 3382780 GTCGAAGAACAGAAA CGCCGCGA-CAGCC GTTG GGCTGGTCGCGGCG TTTGTCGTTTGAGAG TERM 2202 3382780 - 3382810 + T 100 -19.1 -4.13654 | gap 1, opp_overlap 3382780 GTCGAAGAACAGAAA CGCCGCGA-CAGCC GTTG GGCTGGTCGCGGCG TTTGTCGTTTGAGAG Caul_3117 3383786 - 3382884 - | Sec-independent protein translocase, TatC subunit Caul_3118 3384355 - 3383783 - | twin-arginine translocation protein, TatB subunit TERM 2203 3384447 - 3384400 - R 74 -10.5 -3.75153 | gap 1, opp_overlap 3384401, overlap 3384401 GCGCGCGAAGTGAAA CGGCGTCGCGGCCGCTCTCCCC TCCAC GGAAAGAGCGGC-GCGACGAAT CTCCTACGACTTGCG TERM 2204 3384446 - 3384401 - R 74 -14 -2.84878 | gap 1, opp_overlap 3384401, overlap 3384400 CGCGCGAAGTGAAAC GGCGTCGCGGCCGCTCTCCCC TCCAC GGAAAGAGCGGC-GCGACGAA TCTCCTACGACTTGC Caul_3119 3384675 - 3384451 - | twin arginine-targeting protein translocase TERM 2205 3384478 - 3384508 + g 85 -16.1 -3.61398 | gap 1 CAGGTCTTCCTTCTC GGCCTCGGTGCGCG GCAG CGCGC-CCGTGGCC TTGTTGGCGGAGACC Caul_3120 3385442 - 3384792 - | segregation and condensation protein B TERM 2206 3385545 - 3385515 - R 77 -2.5 -5.03314 | opp_overlap 3385475, overlap 3385517 TCGACGCGCAAAAAA TCCTCATCCTGAG CTTGT CGAAGAACGAGGA TTTCTCTCCGGATTT Caul_3121 3386388 - 3385564 - | chromosome segregation and condensation protein ScpA Caul_3122 3387410 - 3386385 - | Beta-N-acetylhexosaminidase TERM 2207 3386651 - 3386689 + g 77 -3.9 -4.71828 | gap 1, opp_overlap 3386660 3386661, overlap 3386661 TCGACAGGTCGTCGC TCATCAG-AAGTCCGTCG AAGC CGATGGATTCGCGGATGA TTTTCTTGATCGCCT TERM 2208 3386953 - 3386929 - G 78 -17.1 -2.78384 | CCGCCGGCCAGCAGA CCCTCGGCCGC CGC GCGGCCCAGGG TGGCCACCTGCTCAG Caul_3123 3388245 - 3387424 - | sporulation domain-containing protein Caul_3124 3389562 - 3388378 - | deoxyguanosinetriphosphate triphosphohydrolase TERM 2209 3389356 - 3389398 + g 70 -3.3 -4.41047 | gap 1, overlap 3389359 CGAATGGGTCAGGCG GGTGCGGAAGTT-GTCGCCC TCGT GGGCGACGAACACCTGGGTC TTTTCCTTGAGCCGT Caul_3125 3389641 - 3389973 + | iron-sulfur cluster assembly accessory protein TERM 2210 3390581 - 3390537 - T 76 -7.8 -4.26189 | gap 2, opp_overlap 3390568 GCACAAACTGCAAAA CCGCCATCGCCGCCGCTCCCCA GGC CAAGG-GC-GCGGCCATGGCCG CCCAGGCGATCGGCT Caul_3126 3390852 - 3390514 - | hypothetical protein Caul_3127 3390888 - 3391676 + | exodeoxyribonuclease III Xth Caul_3128 3391734 - 3392591 + | hypothetical protein Caul_3129 3392654 - 3392992 + | hypothetical protein Caul_3130 3393655 - 3393008 - | lysine exporter protein LysE/YggA TERM 2211 3393553 - 3393518 - G 75 -9.7 -4.09685 | overlap 3393519 CGCCACCGCGTAAAA GCCCGCGC-GCCGGCCA TGAA CGACCGACAGCGCGG-C GAGATAACCCATGTT Caul_3131 3395394 - 3393664 - | dihydroxy-acid dehydratase TERM 2212 3395166 - 3395213 + g 74 -15.5 -3.01712 | overlap 3395209 GCGGGGTGCCGCCGG CCGCCTTGACGCCCTTGGCCA CGGCGT TGGCCTGGCGCATCAGGGCGG TGTTGCAGGGCGCGG TERM 2213 3396867 - 3396903 + G 70 -12.2 -3.26947 | gap 1 GGTCGCCGACGCCCA GGCCTGGGCCACGGCCG ACGG CGGCGGCG-TCCAGGCC TTGGTGTGGGACTTC Caul_3132 3395665 - 3397257 + | xylan 1,4-beta-xylosidase Caul_3133 3398217 - 3397297 - | oxidoreductase domain-containing protein Caul_3134 3398332 - 3399357 + | alcohol dehydrogenase TERM 2214 3399655 - 3399682 + F 76 -11.3 -3.74792 | opp_overlap 3399643 AAAGCGGCGCACCGG CGCGGCAGC CCCTTCCAAT GCTGCCGCG TTTCCATATCTAATC Caul_3135 3399741 - 3400070 + | ATP-dependent Clp protease adaptor protein ClpS TERM 2215 3400652 - 3400639 - g 70 -3.7 -4.42238 | overlap 3400640 3400641 CGACCTCAACGAAAA GGCCC GCCA GGGCA AGGTCGACCCGCTGA TERM 2216 3402363 - 3402352 - g 70 -3.6 -4.40804 | overlap 3402342 GAGCACGCCAGAAAA GCCC GGCA AGGC TCCCAAGGAAGACGA Caul_3136 3400082 - 3402403 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 2217 3402456 - 3402424 - f 78 -14.2 -3.09785 | gap 1, opp_overlap 3402428 TCAGACGGCAAGACA GC-GAGAGGCCCGGA GCGA TCCGGGCCTCTTTGC TTTTGGGCTCGCGAA TERM 2218 3402428 - 3402451 + F 100 -18.2 -4.20806 | opp_overlap 3402424 ACGGCAAGACAGCGA GAGGCCCGGA GCGA TCCGGGCCTC TTTGCTTTTGGGCTC Caul_3137 3402514 - 3402846 + | hypothetical protein Caul_3138 3402897 - 3404540 + | Na+/H+ antiporter Caul_3139 3405017 - 3404586 - | histidine triad (HIT) protein Caul_3140 3405095 - 3405667 + | hypothetical protein Caul_3141 3405720 - 3406205 + | general stress protein TERM 2219 3406246 - 3406278 + T 74 -13.4 -2.92667 | opp_overlap 3406233, overlap 3406233 3406243 AAGCGCTCGTGGACC GCTCTCGTCCTGCG ACAAG CTCAGGACGGGGGC TACTTTGCAGCTTCG Caul_3142 3407506 - 3406346 - | hypothetical protein TERM 2220 3407302 - 3407287 - G 82 -8.2 -4.44046 | opp_overlap 3407296, overlap 3407289 GGGACTTCAAATAAA GCGGCA TGAC CGCCGC CACGCGGCCGGTCTC Caul_3143 3408276 - 3407503 - | glycerophosphoryl diester phosphodiesterase Caul_3144 3408734 - 3408276 - | endoribonuclease L-PSP TERM 2221 3408821 - 3408796 - R 100 -18.3 -5.58179 | opp_overlap 3408785 CAGGACAAGAAAAAA GGCCCGAACCG TTAC CGGCTCGGGCC TTCAAACTGGATCTT Caul_3145 3409293 - 3408859 - | phasin family protein TERM 2222 3409104 - 3409126 + g 72 -13.4 -3.14344 | opp_overlap 3409093 AATAGGCGAACGCTT GGGCGCCCAA GGC TTCGGCGCCC TTGGTGGCGGCGGTC TERM 2223 3409414 - 3409400 - H 75 -4.2 -4.69053 | overlap 3409402 CAGCAGTCAAGAAAA TTGTGC ACC GCACCA TGACCCAGCGGAAAC TERM 2224 3409800 - 3409788 - g 75 -6.9 -4.46212 | TGCTTTACGACAAAA GGGCC GAC AGCCC GCGCTATCCCGCCTC Caul_3146 3409598 - 3410905 + | Serine-type D-Ala-D-Ala carboxypeptidase Caul_3147 3411435 - 3411010 - | heat shock protein DnaJ domain-containing protein Caul_3148 3412303 - 3411467 - | ATPase MipZ Caul_3149 3412486 - 3413358 + | pantoate--beta-alanine ligase TERM 2225 3413473 - 3413435 - T 86 -13.1 -4.08767 | overlap 3413398 3413438 3413464 GCGAGCGGCGTAAAA GTAGCCCTCGTCCTGAG CCTGT CGAAGGACGAGGGCGAC CCCTCCAGCTCTCAG TERM 2226 3413470 - 3413438 - T 75 -13.4 -3.08211 | overlap 3413398 3413435 3413464 AGCGGCGTAAAAGTA GCCCTCGTCCTGAG CCTGT CGAAGGACGAGGGC GACCCCTCCAGCTCT Caul_3150 3413906 - 3413505 - | hypothetical protein Caul_3151 3416058 - 3414085 - | carbamoyl-phosphate synthase L chain ATP-binding TERM 2227 3414662 - 3414614 - G 80 -17.4 -2.87132 | gap 1, opp_overlap 3414655, overlap 3414643 GCGCTGGCCCAGACA TCGGCTCGCGGCTGGTCGGCCTC CATG AAGGCCT-CCAGCCGCTGGCCGA TCGCCGCCAAGGTCG Caul_3152 3417482 - 3416082 - | hypothetical protein Caul_3153 3418340 - 3417501 - | enoyl-CoA hydratase/isomerase Caul_3154 3420060 - 3418453 - | propionyl-CoA carboxylase TERM 2228 3419977 - 3420007 + g 71 -2.4 -4.56597 | opp_overlap 3419989, overlap 3419969 3419979 3419989 GACCCTTTCGCGCAA CGCCTCGACCAA GGCGCGG TTGTGCGCGGCG TTTTTGGCGAAGGAC TERM 2229 3420012 - 3420028 + g 86 -5.8 -4.87665 | overlap 3420013 TGTGCGCGGCGTTTT TGGCGA AGGAC TCGCCG TTTTTGTCGATACCC TERM 2230 3420458 - 3420476 + G 71 -2.2 -4.57073 | CGATTCGGAAATCCT GGCTCTGC CCC GCGCCGCC TTTTTCGAGGCGGTC TERM 2231 3421343 - 3421361 + G 79 -2.2 -4.89852 | overlap 3421326 CGGCGACATCGAGAT CGCCGACC TTT GGCTGCCG TTTTTCTGCGTCTCC Caul_3155 3420153 - 3421952 + | cyclic nucleotide-binding protein Caul_3156 3422706 - 3421930 - | trans-aconitate 2-methyltransferase TERM 2232 3423294 - 3423321 + r 100 -17 -4.35524 | GGCTACGGCGATGGA GGGTCGTCCCGA GCAA TCGGGGCGGCCC TTTTCAATTTGCGGA Caul_3157 3424508 - 3423342 - | acyl-CoA dehydrogenase domain-containing protein TERM 2233 3424545 - 3424517 - R 100 -19.6 -4.01888 | overlap 3424534 ATGGCATAGCACAAA CGCCCGCGGATC AACGA GACCCGCGGGCG CTCATGCTGCGCAGG Caul_3158 3425827 - 3424574 - | glycoside hydrolase family protein Caul_3159 3427514 - 3426045 - | magnesium transporter TERM 2234 3426921 - 3426894 - G 78 -6.9 -4.61633 | overlap 3426897 ATAGACGTCGAAAAA CAGCTCCGGCA GGTGAT CGCCGGAGACG CGCACGTGGTCGATG TERM 2235 3427593 - 3427649 + r 74 -12.4 -3.50869 | gap 2, opp_overlap 3427593 3427594, overlap 3427594 3427615 GCCCTTCCCCGGAAA TGG-TTAGAGCGCCCCTGACGAG-TCGG AAA CCGATTTCGCCAAGCGCGCTCTAAGCCG TTGTCTCACCTGGTG TERM 2236 3427648 - 3427593 - R 76 -12.6 -3.53012 | gap 1, opp_overlap 3427593 3427594 3427615, overlap 3427594 GCCCTTCCCCGGAAA TGGTTAGAGCGCCCCTGACG-AGTCGG AAA CCGATTTCGCCAAGCGCGCTCTAAGCC GTTGTCTCACCTGGT TERM 2237 3427594 - 3427648 + r 72 -13.7 -2.702 | gap 2, opp_overlap 3427593 3427594, overlap 3427593 3427615 CCCTTCCCCGGAAAT GG-TTAGAGCGCCCCTGACGAG-TCGG AAA CCGATTTCGCCAAGCGCGCTCTAAGCC GTTGTCTCACCTGGT TERM 2238 3427647 - 3427594 - R 81 -16.1 -2.71712 | gap 1, opp_overlap 3427594 3427593 3427615, overlap 3427593 CCCTTCCCCGGAAAT GGTTAGAGCGCCCCTGACG-AGTCGG AAA CCGATTTCGCCAAGCGCGCTCTAAGC CGTTGTCTCACCTGG Caul_3160 3428152 - 3427901 - | hypothetical protein TERM 2239 3428197 - 3428174 - H 72 -11.6 -3.38991 | overlap 3428172 AGTCCCTGAAGAACA CGCGCGGCCA TGGT CGGCCGCGTG GCGCCCCTTGCAAGA Caul_3161 3428223 - 3428948 + | lipoyltransferase Caul_3162 3429355 - 3428945 - | hypothetical protein Caul_3163 3431428 - 3429419 - | carbamoyl-phosphate synthase L chain ATP-binding Caul_3164 3431639 - 3432139 + | hypothetical protein Caul_3165 3432723 - 3432148 - | ThiJ/PfpI domain-containing protein TERM 2240 3432262 - 3432292 + g 83 -14.7 -3.63627 | GGGCGCCAGACCCGA GGCGGTGACCAGC TTGCC GTCGGTCACCGCC TTTGGGCTATCGACA Caul_3166 3432849 - 3433340 + | methionine sulfoxide reductase B Caul_3167 3433768 - 3433352 - | hypothetical protein Caul_3168 3433963 - 3433859 - | hypothetical protein Caul_3169 3434391 - 3433960 - | hypothetical protein TERM 2241 3434183 - 3434161 - G 71 -11.3 -3.60627 | gap 1, opp_overlap 3434176, overlap 3434162 3434174 GTAGTTCATGTGAAA GTCGG-GCGG ACAA CCGCGCCGAC GGCGGTATTCGGCGC TERM 2242 3434200 - 3434174 - G 70 -12.3 -3.29043 | opp_overlap 3434176, overlap 3434161 3434162 AAGTCGGGCGGACAA CCGCGCCGA CGGCGGTAT TCGGCGCGG GCCCGCTCGAGCGCG TERM 2243 3434704 - 3434726 + H 74 -9.1 -3.90112 | overlap 3434694 CGACGGATCGCCGAT GGGCGGG CTTACGTCC CCCGCCC TTTGATTAAGCCCCG Caul_3170 3435212 - 3436108 + | alpha/beta hydrolase fold TERM 2244 3436178 - 3436158 - T 82 -11.2 -4.07568 | CCTCGGCGCCCAAAA GCGGACTT TGCCG AAGTCCGC TAAGGGTCCGAGAGC Caul_3171 3437012 - 3436227 - | hypothetical protein TERM 2245 3436607 - 3436549 - G 86 -12.4 -4.17296 | gap 4, opp_overlap 3436582, overlap 3436550 3436563 TCCGACAGATAGAAA CCCGCC-GCCGAGAACGGTCCGCCGCCGGC ATA GCCCGCGTCGG-CCGC-CTGGGCCGGCG-G CAGGGTCGAGGGGTC TERM 2246 3436607 - 3436550 - G 85 -18.4 -3.09896 | gap 3, opp_overlap 3436582, overlap 3436549 3436563 CCGACAGATAGAAAC CCGCC-GCCGAGAACGGTCCGCCGCCGGC ATA GCCCGCGTCGG-CCGC-CTGGGCCGGCGG CAGGGTCGAGGGGTC TERM 2247 3436594 - 3436563 - G 74 -13.6 -3.28791 | gap 1, opp_overlap 3436582, overlap 3436549 3436550 ACCCGCCGCCGAGAA CGGTCCGCCGCCGGC ATA GCCCGCGTCGG-CCG CCTGGGCCGGCGGCA Caul_3172 3437142 - 3437495 + | hypothetical protein Caul_3173 3437898 - 3437545 - | hypothetical protein Caul_3174 3439071 - 3437992 - | hypothetical protein TERM 2248 3439104 - 3439156 + r 89 -17.1 -3.19026 | gap 1, opp_overlap 3439137, overlap 3439106 3439149 GCTTCCACGCTAGGA TCCGCCCG-CCAGCCTGGCCTTGA CGCGCA TCAAGGCCAGGCTGGACGGACCTA TTCCGTCTTCAGATA TERM 2249 3439106 - 3439154 + r 95 -19.7 -3.15503 | gap 1, opp_overlap 3439137, overlap 3439104 3439149 TTCCACGCTAGGATC CGCCCG-CCAGCCTGGCCTTGA CGCGCA TCAAGGCCAGGCTGGACGGACC TATTCCGTCTTCAGA Caul_3175 3440989 - 3439154 - | thiamine biosynthesis protein ThiC Caul_3176 3441276 - 3441794 + | endoribonuclease L-PSP Caul_3177 3442647 - 3441796 - | protein of unknown function zinc metallopeptidase putative TERM 2250 3442736 - 3442721 - R 74 -5.4 -4.64861 | GCGCGCGAAAACAAA GCGTTC CAGA AAACGC TTCAGCGCGCGGGGG Caul_3178 3443130 - 3442738 - | hypothetical protein Caul_3179 3443744 - 3443181 - | TPR repeat-containing protein TERM 2251 3444082 - 3444054 - g 71 -3 -4.63218 | gap 1 GCGGCGGCAACAAAA CCCG-CAAGCTGG AGTT CCTGCTGGGCGAG GCGCTCGCGCAAGGC Caul_3180 3443909 - 3444910 + | D-cysteine desulfhydrase Caul_3181 3444903 - 3445565 + | aspartate racemase Caul_3182 3445575 - 3446243 + | hypothetical protein Caul_3183 3446334 - 3447776 + | M6 family peptidase Caul_3184 3448419 - 3447790 - | uracil phosphoribosyltransferase Caul_3185 3449136 - 3448510 - | TetR family transcriptional regulator Caul_3186 3449198 - 3450706 + | RND efflux system outer membrane lipoprotein Caul_3187 3450759 - 3451886 + | secretion protein HlyD family protein Caul_3188 3451921 - 3453486 + | EmrB/QacA family drug resistance transporter Caul_3189 3453850 - 3454869 + | peptidase S58 DmpA Caul_3190 3455351 - 3454824 - | MarR family transcriptional regulator Caul_3191 3456318 - 3455551 - | hypothetical protein TERM 2252 3455876 - 3455905 + g 76 -13.5 -3.49756 | overlap 3455902 GCGCCGCCGCCGTGC GCCCCGCCATGGC CGTC GTCGTGGCCGGGC TTGTCGTCCTTCTTG Caul_3192 3456713 - 3456447 - | hypothetical protein Caul_3193 3456796 - 3456978 + | hypothetical protein Caul_3194 3457407 - 3456985 - | hypothetical protein Caul_3195 3457667 - 3457413 - | glutathione peroxidase Caul_3196 3457828 - 3458430 + | DedA family protein Caul_3197 3458427 - 3459032 + | hypothetical protein Caul_3198 3459034 - 3459594 + | ubiquinone biosynthesis protein COQ7 TERM 2253 3460327 - 3460350 + G 72 -13.8 -3.14051 | opp_overlap 3460315, overlap 3460325 TCACCGTCCCCGCCC CGCTGTCGGC CCCC GCCGGCGGCG TGTTGGTCGGCGTCG TERM 2254 3461450 - 3461432 - g 71 -3 -4.57569 | TCAGGCCTGGAAAAA GGCCGC GGACGAA GCCGCC AAGAAGGCCGAAGAG Caul_3199 3459669 - 3461498 + | peptidase M1 membrane alanine aminopeptidase Caul_3200 3461659 - 3462198 + | hypothetical protein TERM 2255 3462430 - 3462469 + T 100 -20.9 -5.26119 | gap 1, opp_overlap 3462434 CGACGCTGAGTCGAT GCA-AGCGGGGCTGGAGG CCTAT TCTCCAGCCCCGCTATGC TTTTATTTTTCGGCG TERM 2256 3462464 - 3462434 - T 93 -19.8 -3.06796 | opp_overlap 3462430 GCTGAGTCGATGCAA GCGGGGCTGGAG GCCTATT CTCCAGCCCCGC TATGCTTTTATTTTT Caul_3201 3463103 - 3462543 - | HNH endonuclease Caul_3202 3463765 - 3463280 - | transcription elongation factor regulatory protein TERM 2257 3463937 - 3463912 - R 83 -9.6 -4.26589 | ACCAGACATGCAAAA GCCGCCAACG GGTAAG CGCGGGCGGC TTCGGATAACTTGAA Caul_3203 3464130 - 3464020 - | hypothetical protein TERM 2258 3464429 - 3464459 + G 72 -15.3 -2.82933 | GCTGCGGGCCGTGGC GCGCGAGGCGGGG GTCAG CCCCGCCGCGCCC TATCATCACTTCAAG Caul_3204 3464289 - 3464924 + | TetR family transcriptional regulator Caul_3205 3465018 - 3465857 + | glutamyl-Q tRNA(Asp) synthetase Caul_3206 3465947 - 3467374 + | TAP domain-containing protein TERM 2259 3467886 - 3467861 - T 74 -5.3 -4.63527 | gap 1, overlap 3467863 CGACCACCCCAAAAA GCGCGTCAGGTC GCC GGCC-GACGCCC CTCCCCGTGCTTTCA Caul_3207 3469734 - 3468661 - | beta-lactamase Caul_3208 3471259 - 3470519 - | GCN5-related N-acetyltransferase TERM 2260 3471304 - 3471279 - R 95 -20.5 -3.24747 | opp_overlap 3471279 TCCCTATAGCAGGAA GGCGCCGGTTC GTTG GAACCGGCGCC TTTTTGAATTACCGC TERM 2261 3471279 - 3471304 + r 100 -20.5 -4.74103 | opp_overlap 3471279 TCCCTATAGCAGGAA GGCGCCGGTTC GTTG GAACCGGCGCC TTTTTGAATTACCGC Caul_3209 3471535 - 3471332 - | cold-shock DNA-binding domain-containing protein Caul_3210 3472338 - 3471709 - | redoxin domain-containing protein TERM 2262 3472140 - 3472159 + g 74 -11.4 -3.72695 | overlap 3472152 CCGGGGCGGCGCGCG GCTGGGCG GGCA CGTCCAGC TTTGCTAGGGACGCT TERM 2263 3473478 - 3473451 - g 76 -7.6 -4.28254 | gap 1, opp_overlap 3473455, overlap 3473454 GCCCAACACCGAAAA GATGGCCGCCGCC GCC GGC-GCGGGCTTC TCGACCGCCACGGAC Caul_3211 3472396 - 3473763 + | argininosuccinate lyase Caul_3212 3473760 - 3474065 + | hypothetical protein TERM 2264 3474169 - 3474116 - f 83 -14.5 -3.53012 | gap 1, overlap 3474135 3474156 CGTCTCCCCGGCAAA GGCCGGGGCCCAGATGAAACCCGGCG CCG CTCCGGATGA-ATCTGGATCCCGGCC TCCGCCGGGAAGACG Caul_3213 3474188 - 3475486 + | diaminopimelate decarboxylase Caul_3214 3475594 - 3477192 + | methyl-accepting chemotaxis sensory transducer Caul_3215 3477886 - 3477311 - | phosphoribosyltransferase Caul_3216 3478778 - 3477852 - | Zinc finger-domain-containing protein Caul_3217 3478836 - 3479618 + | cell division ATP-binding protein FtsE Caul_3218 3479615 - 3480508 + | hypothetical protein TERM 2265 3481113 - 3481095 - g 70 -4.4 -4.43477 | overlap 3481096 GGGACCCAAGGAAAA GGCCGGTT CAG AGCCGGCG AAGGAAGCGTCTTGA Caul_3219 3480505 - 3481128 + | hypothetical protein Caul_3220 3481125 - 3481835 + | phospholipid/glycerol acyltransferase Caul_3221 3482557 - 3481976 - | aspartyl/asparaginyl beta-hydroxylase Caul_3222 3482612 - 3483772 + | aspartyl/asparaginyl beta-hydroxylase TERM 2266 3483824 - 3483861 + T 74 -12.7 -3.30124 | gap 1, opp_overlap 3483800 CCACCGGAAGCGCAT GCGTTCA-CGCGTCGGTC CCG GATCGGCGCGCTGCGCGC TTGTCCGGGATGACA Caul_3223 3484456 - 3483878 - | ChaC family protein TERM 2267 3484764 - 3484725 - g 77 -14.8 -3.14132 | CGTGCGCCTGACCAA CGCCCGGGTCGCCGAGCC GTCG GGCTGGGCGTTGCGGGCG CCGGAGCTGACGGGC Caul_3224 3484486 - 3485496 + | hypothetical protein Caul_3225 3485833 - 3485513 - | XRE family plasmid maintenance system antidote protein Caul_3226 3486154 - 3485867 - | plasmid maintenance system killer TERM 2268 3486499 - 3486539 + G 71 -11.8 -3.59979 | gap 1, opp_overlap 3486521 GGGCCGGCCTGGCGC GCGCGGTGGCGGCGGCC AAGCAGGC GGCCGGCGACACCG-GC TTTGGCCTGCGCCCC TERM 2269 3486561 - 3486521 - g 70 -14.6 -2.70932 | gap 1, opp_overlap 3486499 GGCGGCGGCCAAGCA GGCGGCCGGCGACACCGGC TTTG GCCTGCGCC-CCGGCCGCG AGGCCCTGATCGTTC TERM 2270 3486806 - 3486779 - g 74 -13.4 -3.35679 | overlap 3486802 GGTCGCCACCGACAA GGACGCCCTGGC GGCC GCCAAGACGCCC TGGAGCGTCGGCGTC Caul_3227 3486387 - 3487187 + | hypothetical protein Caul_3228 3487393 - 3488520 + | histidinol-phosphate aminotransferase Caul_3229 3488654 - 3489592 + | cyclohexadienyl dehydrogenase Caul_3230 3489692 - 3489991 + | signal transduction protein TERM 2271 3490281 - 3490324 + G 71 -10.3 -3.73224 | overlap 3490275 3490284 GCGGAGTATTTCCGC CAGTTGGGCGAAATTCTGG ACATCA CCAGCATCTCGCCCAATCG TTTCCTAAGCGATGG Caul_3231 3490101 - 3490505 + | ketosteroid isomerase-like protein TERM 2272 3490509 - 3490553 + T 100 -17.9 -4.35926 | opp_overlap 3490519 ATGGCGGCGTGACGG CCTGAAGCAAGTCGCGCGA CATGGGA TCGCGCGGCTCGCTCCAGG TTTTGGCTTTCACAT Caul_3232 3490907 - 3490599 - | hypothetical protein TERM 2273 3490722 - 3490764 + g 78 -9.7 -4.2349 | gap 1, overlap 3490724 CAGGTGATCGATCTT CTCCCCCTCGGGCAAGGGCT CGAC GGCCCG-GCTGGAGGGGGTG TTTTCGGTCTGGAAG TERM 2274 3490724 - 3490762 + g 74 -10.9 -3.71913 | gap 1, overlap 3490722 GGTGATCGATCTTCT CCCCCTCGGGCAAGGGCT CGAC GGCCCG-GCTGGAGGGGG TGTTTTCGGTCTGGA Caul_3233 3491415 - 3491071 - | hypothetical protein TERM 2275 3491305 - 3491339 + g 72 -8.5 -4.09739 | gap 1, opp_overlap 3491304 3491305, overlap 3491305 CGGCCCTGTGGAAAT CGGC-GCCGGAGCCTC CCCC GAGGCTTCGGGAGCGG TTTTGGCCGACTTGC Caul_3234 3491711 - 3493741 + | glucosyltransferase MdoH Caul_3235 3493819 - 3494736 + | hypothetical protein TERM 2276 3494770 - 3494819 + T 75 -4 -4.70659 | opp_overlap 3494761, overlap 3494766 GAGAAGGTGGCCCGC GCAGCGGTTGGGTGAGCGGGTC CGGCAA GCTTCGCTCCACCTTTCGCTGC TTTTTGGCTGTGACG TERM 2277 3494888 - 3494930 + T 100 -23.6 -5.07652 | opp_overlap 3494888 3494890, overlap 3494889 3494890 TGCGACATCCAGAAA TACTAGAGCCCCGACCTGAT TGC ATCAGGTCGGGGCTCTAGGC TTTTGTTTTAGGACA TERM 2278 3494930 - 3494888 - T 100 -23.6 -3.95073 | opp_overlap 3494888 3494889 3494890, overlap 3494890 TGCGACATCCAGAAA TACTAGAGCCCCGACCTGAT TGC ATCAGGTCGGGGCTCTAGGC TTTTGTTTTAGGACA TERM 2279 3494889 - 3494929 + T 100 -27.1 -3.63868 | opp_overlap 3494888 3494890, overlap 3494888 3494890 GCGACATCCAGAAAT ACTAGAGCCCCGACCTGAT TGC ATCAGGTCGGGGCTCTAGG CTTTTGTTTTAGGAC TERM 2280 3494890 - 3494928 + T 100 -30.6 -2.77598 | opp_overlap 3494888 3494890, overlap 3494889 3494888 CGACATCCAGAAATA CTAGAGCCCCGACCTGAT TGC ATCAGGTCGGGGCTCTAG GCTTTTGTTTTAGGA TERM 2281 3494928 - 3494890 - T 100 -30.6 -3.56568 | opp_overlap 3494890 3494889 3494888, overlap 3494888 CGACATCCAGAAATA CTAGAGCCCCGACCTGAT TGC ATCAGGTCGGGGCTCTAG GCTTTTGTTTTAGGA Caul_3236 3496487 - 3494994 - | carboxylesterase type B TERM 2282 3496421 - 3496407 - G 72 -9.2 -3.98172 | opp_overlap 3496412 AGGAAGACCGAGAAA GGCGCG GAC CGCACC CTTGCGGCGGCCCTG Caul_3237 3497313 - 3496489 - | short chain dehydrogenase TERM 2283 3497880 - 3497927 + G 74 -12.7 -3.63744 | overlap 3497878 AAGGATATGGTTGCG GTTCGGCTAGGCGATGACG TTCGCTTCCT CGCCGTCGCCTCGCCGAGC TATTTTGCCGACCAC Caul_3238 3497409 - 3498326 + | LysR family transcriptional regulator TERM 2284 3498511 - 3498539 + T 100 -16 -5.28778 | opp_overlap 3498530 CCTCCCGAATAGTCT GGCCGCGCCC AAGCCAAAG GGGCGCGGCC TTTTTTCTCAGTGGT TERM 2285 3498711 - 3498725 + T 78 -3.4 -5.07652 | opp_overlap 3498689 ACCTGATCGGATCAG GCCAGG GCT CTAGGC TTTTGTTTTAACGCA Caul_3239 3499979 - 3498783 - | acetyl-CoA acetyltransferase TERM 2286 3499710 - 3499752 + g 87 -17.7 -3.28712 | gap 1, overlap 3499690 3499704 3499711 GCCGCGCAACGCCTC GGTGCCGGTGGCGCAGG-CG TTCT CGACCCGCGTCACCGGCACA TTGTGCAGACGAAGG TERM 2287 3499711 - 3499751 + g 85 -21.2 -2.57132 | gap 1, overlap 3499690 3499704 3499710 CCGCGCAACGCCTCG GTGCCGGTGGCGCAGG-CG TTCT CGACCCGCGTCACCGGCAC ATTGTGCAGACGAAG Caul_3240 3501448 - 3499991 - | hypothetical protein TERM 2288 3500971 - 3500915 - G 85 -17.1 -3.14683 | opp_overlap 3500948 3500953 ATAGTGGTCGACGAA GTCCACCGTGACGCTGTGCGCGCCCAG GAA CTCGGCGATCACCGCGTCGCGGCCGAC CAGCATCGCGGCCGC Caul_3241 3502356 - 3501445 - | short-chain dehydrogenase/reductase SDR TERM 2289 3501706 - 3501724 + g 73 -7.3 -4.10657 | overlap 3501707 CGTGAGGGTCTTGAG CCGCGCC ATCGC GGCGCGC TTTTCCGCGCTGTCG Caul_3242 3502507 - 3503412 + | LysR family transcriptional regulator TERM 2290 3503468 - 3503513 + T 100 -14.7 -5.09259 | opp_overlap 3503478, overlap 3503472 TCGACGCCCTTCGCC CCTAGAGCAAGCCGCGCGA TATAAGAC TCGCACGGCTTGCTCCTGG TTTTGTTTTCGCATC TERM 2291 3503472 - 3503509 + T 83 -17.1 -2.62168 | opp_overlap 3503478, overlap 3503468 CGCCCTTCGCCCCTA GAGCAAGCCGCGCGA TATAAGAC TCGCACGGCTTGCTC CTGGTTTTGTTTTCG Caul_3243 3505927 - 3503570 - | TonB-dependent receptor TERM 2292 3505956 - 3505972 + H 78 -6.5 -4.614 | overlap 3505958 CCCGCATTCGGGCCC TGTGGCG TTT CGCCAAA TTTTCTGTGCTTCGG Caul_3244 3506283 - 3507761 + | aldehyde dehydrogenase Caul_3245 3509455 - 3507830 - | glucose-methanol-choline oxidoreductase TERM 2293 3508501 - 3508463 - G 72 -14 -3.14132 | gap 3, opp_overlap 3508461 3508491 TTGGGTGGCCATCAA GCCCTGGCCCGTCAGGCGC CAGC GCGC-TG-C-GGCCAGGGC CACTTTGTCGGCGCG Caul_3246 3510572 - 3509529 - | vanillate monooxygenase TERM 2294 3510677 - 3510697 + H 81 -7.5 -4.46212 | overlap 3510679 TGGCGTCTTCTTTGC GTGATCGCG AAA CGTGATCCC TTTTCTGGTCCCGCG Caul_3247 3511019 - 3512512 + | AMP-dependent synthetase and ligase Caul_3248 3512638 - 3513441 + | enoyl-CoA hydratase/isomerase TERM 2295 3513694 - 3513644 - g 74 -14.7 -3.01791 | gap 2 AGCGCTGGGCCAAGA GCACCGGGTCGACGTCCTGGTCGAG CCT CTCGACCTGGGCGTC--CCGGGCGC GTCCGTCGCGCTGCA Caul_3249 3513489 - 3514265 + | short-chain dehydrogenase/reductase SDR TERM 2296 3514282 - 3514339 + T 100 -26.3 -2.8372 | gap 1, overlap 3514282 GGGGTCCGCCGGGAC GGGCGGCC-CCCTGCCGCAACGGTCCAC CCG GTGGAGCGCTGCGGCAGGGCGGCAGGCC GTTTCGTCGAACGTC TERM 2297 3514282 - 3514340 + T 100 -20.3 -3.73224 | gap 2, overlap 3514282 GGGGTCCGCCGGGAC -GGGCGGCC-CCCTGCCGCAACGGTCCAC CCG GTGGAGCGCTGCGGCAGGGCGGCAGGCCG TTTCGTCGAACGTCG Caul_3250 3515660 - 3514359 - | major facilitator transporter Caul_3251 3517619 - 3515922 - | tannase and feruloyl esterase TERM 2298 3517698 - 3517647 - R 74 -9.2 -3.90112 | gap 1, overlap 3517651 3517652 TGGTTTGGAATGAAA GCAAGGGCGACGCGGACGGCGTCGC GCG GCGAGGCCGCCCCCGTC-CCGGCTC ATCGGCGCTCGCCCC TERM 2299 3517694 - 3517651 - R 86 -15.2 -3.61468 | gap 1, overlap 3517647 3517652 TTGGAATGAAAGCAA GGGCGACGCGGACGGCGTCGC GCG GCGAGGCCGCCCCCGTC-CCG GCTCATCGGCGCTCG TERM 2300 3517693 - 3517652 - R 87 -18.7 -2.76399 | gap 1, overlap 3517651 3517647 TGGAATGAAAGCAAG GGCGACGCGGACGGCGTCGC GCG GCGAGGCCGCCCCCGTC-CC GGCTCATCGGCGCTC Caul_3252 3520093 - 3517697 - | TonB-dependent receptor plug TERM 2301 3519590 - 3519569 - G 71 -11.6 -3.61517 | opp_overlap 3519541 3519571 ACGCTGGTTGAAGAA CAGCACCG CGCCGC CGGTGCTG TTGCGGCCGAAAAGC Caul_3253 3521726 - 3520350 - | MATE efflux family protein TERM 2302 3520973 - 3521004 + g 79 -15.1 -3.28712 | AGCCGACCCGGCGCT GCTCGCGCTCGGC GGCCAG GTCGGGCGCGGGC TTGTCGAACACGCCC TERM 2303 3521712 - 3521675 - G 72 -15.5 -2.88822 | gap 1, opp_overlap 3521709, overlap 3521672 GGTCGGAGACAATGA CGCCGCG-CGGCTGCCCA TTG CGGGGAGCCGGCGCGGCC GCGGAACGCGACATC Caul_3254 3522057 - 3522890 + | flagellin domain-containing protein Caul_3255 3522926 - 3523321 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_3256 3523325 - 3524380 + | hypothetical protein Caul_3257 3524963 - 3524388 - | hypothetical protein Caul_3258 3525307 - 3524960 - | hypothetical protein Caul_3259 3525444 - 3525767 + | hypothetical protein TERM 2304 3525803 - 3525768 - T 70 -11.8 -3.20348 | gap 1, overlap 3525740 3525782 GTGACGAAGACCTAA CCCCGCCTAAGCCA-CG CCG CGACGGCCCAGGCGTGG GCGTCGTGCCGCAGC Caul_3260 3526210 - 3525764 - | NUDIX hydrolase TERM 2305 3526125 - 3526169 + g 82 -15 -3.40403 | gap 2, opp_overlap 3526085 TGGACCAGGGCGATC GCCCCGTT-GG-CGCCCTCGGC GAT GCCGAAGGCGGCCCAGCGGTGC TTGTACTCCAGGCCC Caul_3261 3527262 - 3526216 - | hypothetical protein Caul_3262 3527627 - 3528121 + | 3D domain-containing protein Caul_3263 3528611 - 3528186 - | response regulator receiver protein Caul_3264 3529000 - 3528611 - | hypothetical protein Caul_3265 3529885 - 3529109 - | phosphoadenosine phosphosulfate reductase Caul_3266 3530403 - 3529885 - | hypothetical protein Caul_3267 3532045 - 3530387 - | nitrite/sulfite reductase hemoprotein beta subunit Caul_3268 3532416 - 3532051 - | hypothetical protein Caul_3269 3533366 - 3532413 - | uroporphyrin-III C-methyltransferase TERM 2306 3532470 - 3532517 + g 82 -16.4 -3.28712 | gap 1, opp_overlap 3532505 3532506, overlap 3532454 3532505 CTCGTCCTTCGACAG GCTCAGGATGAGGTCTACTGCGG CGC CCG-AGACAACCTCATCCTGAGC TTGTCGAAGGACGAG TERM 2307 3533482 - 3533446 - H 83 -14.4 -3.53012 | gap 1 CCGGTTGCGCCGAAA GCATTGCGGGGCGAACC CTAG GGTCCGCCCCGCC-CGC GCTCACCGATGAAAA Caul_3270 3533588 - 3534544 + | LysR family transcriptional regulator Caul_3271 3534551 - 3534880 + | chorismate mutase TERM 2308 3534989 - 3534947 - T 85 -14.9 -3.62046 | gap 1, opp_overlap 3534953 3534954, overlap 3534949 3534954 TGAGGGGTTGAAGAA CACAAAAGCCGCGACCGGCC TTTC GGCTTGTCGCGGCTTTCG-G TCTGAGAGACCCCTC TERM 2309 3534988 - 3534949 - T 93 -18.6 -3.38991 | opp_overlap 3534953 3534954, overlap 3534947 3534954 AGGGGTTGAAGAACA CAAAAGCCGCGACCGGCC TTTC GGCTTGTCGCGGCTTTCG GTCTGAGAGACCCCT TERM 2310 3534983 - 3534954 - T 100 -14.9 -4.79752 | opp_overlap 3534953 3534954, overlap 3534949 3534947 TTGAAGAACACAAAA GCCGCGACCGGCC TTTC GGCTTGTCGCGGC TTTCGGTCTGAGAGA TERM 2311 3534954 - 3534983 + T 100 -17.1 -3.70902 | opp_overlap 3534949 3534947 3534954, overlap 3534953 TTGAAGAACACAAAA GCCGCGACCGGCC TTTC GGCTTGTCGCGGC TTTCGGTCTGAGAGA Caul_3272 3535882 - 3535055 - | hypothetical protein Caul_3273 3536464 - 3536126 - | hypothetical protein TERM 2312 3536315 - 3536325 + g 72 -6.8 -4.37886 | overlap 3536312 GACCGCGTCCGACCA GCCA GGA TGGC TTTTGTCGAGCATCG Caul_3274 3537968 - 3537108 - | integrase catalytic region TERM 2313 3537406 - 3537416 + g 75 -4.6 -4.56775 | opp_overlap 3537405 GAATGATGAATAAGG CCTG GCG CGGG TTTTTGGCGCGCGAT TERM 2314 3537975 - 3537997 + r 91 -3.3 -5.45726 | gap 1 GAACTTCATCGGGAG GCCGCTC-CG AAGA TGAGCGCGGC TTTTTTTAGGATGTC Caul_3275 3538279 - 3537965 - | transposase IS3/IS911 family protein TERM 2315 3538128 - 3538076 - G 100 -25.6 -2.8547 | gap 1, opp_overlap 3538078 3538102 AGCGGCCAGATCAGA CGGCGACGGGGCCGGCGCTTGCG TGTGGGGG CGCC-GCGCCGGCCCCGTCGCCC GCGTCCCGTATTGGA Caul_3276 3538344 - 3539549 + | carbohydrate-binding family 6 protein Caul_3277 3539579 - 3542503 + | glycoside hydrolase family protein Caul_3278 3544815 - 3543259 - | tryptophan halogenase Caul_3279 3546937 - 3544868 - | putative lipoprotein TERM 2316 3546997 - 3546962 - R 100 -13.2 -4.59853 | gap 1, overlap 3546937 3546963 3546964 CCAACCGCCCAAAAA TGGGGCGGCGGA-ACGC TTC GCGCGTCCGCCGCCCTG CCTAGTGCCGCACTT TERM 2317 3546996 - 3546963 - R 88 -16.7 -3.3543 | gap 1, overlap 3546937 3546962 3546964 CAACCGCCCAAAAAT GGGGCGGCGGA-ACGC TTC GCGCGTCCGCCGCCCT GCCTAGTGCCGCACT TERM 2318 3546995 - 3546964 - R 90 -20.2 -2.60776 | gap 1, overlap 3546937 3546963 3546962 AACCGCCCAAAAATG GGGCGGCGGA-ACGC TTC GCGCGTCCGCCGCCC TGCCTAGTGCCGCAC Caul_3280 3549783 - 3547012 - | TonB-dependent receptor Caul_3281 3550842 - 3549892 - | anti-FecI sigma factor, FecR Caul_3282 3551401 - 3550817 - | ECF subfamily RNA polymerase sigma-24 factor Caul_3283 3552575 - 3551646 - | esterase/lipase-like protein Caul_3284 3552991 - 3552572 - | signal transduction protein TERM 2319 3553048 - 3553011 - R 71 -14.1 -2.52896 | opp_overlap 3553007 3553013 3553039 GGACTCCGGAAGGCA GCCCGCCGCGCCG TTTGGGGGAGCT CGGCGCGGCGGGT CTGGACGCGTTCGAT Caul_3285 3553470 - 3553063 - | hypothetical protein TERM 2320 3553430 - 3553376 - G 82 -13.4 -3.73775 | overlap 3553342 3553377 TGGACGCTGACGAAA CGGCCGTGCTGGCCGGCCTGGGCG GGCGCGG CGATCATGGCGGCCAGCACCGCCA GGGACGAGAGGCCGG TERM 2321 3553429 - 3553377 - G 72 -14.7 -2.84051 | overlap 3553342 3553376 GGACGCTGACGAAAC GGCCGTGCTGGCCGGCCTGGGCG GGCGCGG CGATCATGGCGGCCAGCACCGCC AGGGACGAGAGGCCG Caul_3286 3553627 - 3554346 + | two component transcriptional regulator TERM 2322 3554796 - 3554831 + G 78 -13.2 -3.61715 | overlap 3554797 GACGGCGAGGTGCTG GTGCTGCGCCGTCGCG CCCC TGAGACGGCGCGGCAA TTCTTCAGCCGGGTC TERM 2323 3554797 - 3554830 + G 74 -16.7 -2.76815 | overlap 3554796 ACGGCGAGGTGCTGG TGCTGCGCCGTCGCG CCCC TGAGACGGCGCGGCA ATTCTTCAGCCGGGT Caul_3287 3554349 - 3555788 + | integral membrane sensor signal transduction histidine kinase TERM 2324 3555880 - 3555857 - T 70 -11.6 -3.14229 | overlap 3555845 3555843 3555855 AGAGCGCGACGAACA CCCCGCGCCG ACGC CGGCGCGACG TCGGGTTAGACCGCC Caul_3288 3558207 - 3556015 - | Beta-glucosidase TERM 2325 3558358 - 3558328 - R 100 -15.4 -5.03715 | overlap 3558330 ACGACGTCGAAAAAA TACCCCGACGGTCA GGC CGACCGTCGGGGCC GCAGGGCGCGTCGGG TERM 2326 3558356 - 3558330 - R 100 -20.2 -4.14633 | overlap 3558328 GACGTCGAAAAAATA CCCCGACGGTCA GGC CGACCGTCGGGG CCGCAGGGCGCGTCG Caul_3289 3561175 - 3558401 - | TonB-dependent receptor TERM 2327 3561280 - 3561263 - R 76 -12.7 -3.53761 | GAAGTCTTCTGGAAA CTGCGGC CTGC GCCGCAG TAAAGTCAGAGCTCT Caul_3290 3563486 - 3561450 - | putative D-(-)-3-hydroxybutyrate oligomer hydrolase Caul_3291 3563805 - 3563479 - | hypothetical protein Caul_3292 3565160 - 3563802 - | hypothetical protein TERM 2328 3563970 - 3564003 + g 78 -17.4 -2.71144 | CGCGGCCTCCGCGCT GGTGCGCGTCCGGG CCACGA CCCTGGCGCGCACC TCGTTGGGCAGGGTG Caul_3293 3566464 - 3565157 - | CitMHS family citrate/H+ symporter TERM 2329 3566166 - 3566199 + g 78 -9.5 -4.11216 | gap 1 GCCAGAAGCGCGGTG CCGACGGTGATACGGC TGG GCCGCAT-GCCGACGG TTTTGAGAATGCGCG Caul_3294 3567494 - 3566610 - | LysR family transcriptional regulator TERM 2330 3566888 - 3566868 - G 81 -12.5 -3.85698 | CCCCGCGGCCAGAAA CGCGCCCTC GAC GAGGTCGCG CACGCTGCTGCCCCG Caul_3295 3568502 - 3567735 - | hypothetical protein TERM 2331 3568449 - 3568467 + g 81 -4.4 -4.87665 | overlap 3568445 3568445 TTGCCCCTCCAGCGC CGGCGGCA AGT TGGCGACG TTTTTGTCGGTCAGG TERM 2332 3568828 - 3568855 + r 73 -12.8 -3.21099 | opp_overlap 3568835, overlap 3568812 3568829 3568835 CGCCTGTGAGAGTTT CCGCAAACTCTC ACGT GAGAGTTTGCGC TTGATCCTCGCGCGG TERM 2333 3568829 - 3568854 + r 79 -16.3 -2.52516 | opp_overlap 3568835, overlap 3568812 3568828 3568835 GCCTGTGAGAGTTTC CGCAAACTCTC ACGT GAGAGTTTGCG CTTGATCCTCGCGCG TERM 2334 3569007 - 3569045 + r 81 -15.3 -3.07994 | gap 1, opp_overlap 3568998 3569009 CCGAAACGGCGGCTA AACGCAGAACGCCCCCTG TCTT CAGGGGGCGTTC-GCGGC TTGACTGGCCTTGGC TERM 2335 3569043 - 3569009 - R 100 -22.3 -3.54935 | gap 1, opp_overlap 3569007, overlap 3568998 GAAACGGCGGCTAAA CGCAGAACGCCCCCTG TCTT CAGGGGGCGTTC-GCG GCTTGACTGGCCTTG Caul_3296 3569320 - 3569063 - | transglycosylase-associated protein Caul_3297 3570611 - 3569529 - | hypothetical protein TERM 2336 3569655 - 3569608 - G 72 -4.1 -4.66537 | gap 3, overlap 3569609 3569610 CGCGGCAACACAAAA CGCGCGGCCAGGCCTT-CGGGTCG CCA CG-CCAGCAACGCCTGGCCCC-CA AGTTGCCGTTCGACG Caul_3298 3573516 - 3570748 - | PAS/PAC sensor hybrid histidine kinase Caul_3299 3574195 - 3573560 - | CheC, inhibitor of MCP methylation Caul_3300 3574575 - 3574192 - | response regulator receiver protein TERM 2337 3574800 - 3574827 + r 71 -11.2 -3.40403 | opp_overlap 3574794 3574808, overlap 3574802 3574803 AGTCGGAAATGCCTT GTAGCAGAGCCG TCAA CGGCTCTGCGTC TTCTACTCGACAGAC TERM 2338 3574802 - 3574825 + r 72 -12.4 -3.27475 | opp_overlap 3574794 3574808, overlap 3574800 3574803 TCGGAAATGCCTTGT AGCAGAGCCG TCAA CGGCTCTGCG TCTTCTACTCGACAG TERM 2339 3574803 - 3574824 + r 77 -15.9 -2.56271 | opp_overlap 3574794 3574808, overlap 3574802 3574800 CGGAAATGCCTTGTA GCAGAGCCG TCAA CGGCTCTGC GTCTTCTACTCGACA Caul_3301 3576803 - 3574881 - | CheA signal transduction histidine kinase Caul_3302 3577624 - 3576800 - | MCP methyltransferase, CheR-type Caul_3303 3578754 - 3577654 - | response regulator receiver modulated CheB methylesterase Caul_3304 3580190 - 3578751 - | CheW protein TERM 2340 3578892 - 3578881 - G 73 -7.2 -4.15044 | overlap 3578882 GCGCGGTCGAACAAA CGGC CGCC GCCG TCCGACAGTTCCGGC TERM 2341 3579739 - 3579709 - G 82 -8.3 -4.46212 | gap 1, opp_overlap 3579717, overlap 3579717 CCGGCCAGGACAAAA CCGAGAAAGGCCGC CTGC GCGGCCTTTG-CGA CCGTCGCACCCGCCA TERM 2342 3579717 - 3579732 + g 71 -11.8 -3.54424 | opp_overlap 3579717 3579709 GACAAAACCGAGAAA GGCCGC CTGC GCGGCC TTTGCGACCGTCGCA TERM 2343 3579732 - 3579717 - G 79 -11.8 -4.07786 | opp_overlap 3579717, overlap 3579709 GACAAAACCGAGAAA GGCCGC CTGC GCGGCC TTTGCGACCGTCGCA Caul_3305 3582120 - 3580192 - | methyl-accepting chemotaxis sensory transducer TERM 2344 3580453 - 3580471 + g 73 -9.5 -3.82191 | overlap 3580447 AGCGACCTGGGCCAG CCGGGCC TCTAT GGCCTGG TTCTTGTCGAGTTCG Caul_3306 3583818 - 3582394 - | RND efflux system outer membrane lipoprotein Caul_3307 3587027 - 3583818 - | acriflavin resistance protein TERM 2345 3585212 - 3585201 - G 73 -7.2 -4.24075 | overlap 3585202 ATTGACGAACAGAAA GCCG CCGC CGGC CCGGGCGCCGCCGGT Caul_3308 3590164 - 3587024 - | acriflavin resistance protein TERM 2346 3588256 - 3588278 + g 72 -6.2 -4.25283 | overlap 3588242 GCACGGCGGCCACGC GGTCGCGCAG CCG CTGCATGATC TTTTCCTGCGAGCCT TERM 2347 3589366 - 3589415 + g 88 -15.5 -3.78934 | CCAGGCGGGTGTTCT CGGCGCTCTGCACCACTTGGGCG ATGT CGCGCAGGCGGATCGGGGCGCCG TTCTTGTAGGAGACG Caul_3309 3591466 - 3590174 - | RND family efflux transporter MFP subunit Caul_3310 3591723 - 3592355 + | glutathione S-transferase domain-containing protein Caul_3311 3592352 - 3593836 + | acetyl-CoA acetyltransferase Caul_3312 3593881 - 3594360 + | hypothetical protein Caul_3313 3594450 - 3595682 + | hypothetical protein Caul_3314 3597573 - 3595657 - | 1-deoxy-D-xylulose-5-phosphate synthase Caul_3315 3598475 - 3597591 - | polyprenyl synthetase Caul_3316 3598822 - 3598472 - | export-related chaperone CsaA Caul_3317 3599064 - 3598822 - | exodeoxyribonuclease VII, small subunit TERM 2348 3599097 - 3599130 + r 76 -13.8 -3.14848 | gap 1, overlap 3599108 CGGCGCACCCTAGTG GCGGGCCGCCGCGCG GGCAA CGC-CGTTGGCCCGC GTTTTGGTGAACAAG TERM 2349 3599108 - 3599131 + r 95 -13.2 -4.25104 | gap 1, overlap 3599097 AGTGGCGGGCCGCCG CGCGGGC-AAC GCC GTTGGCCCGCG TTTTGGTGAACAAGG Caul_3318 3599845 - 3599183 - | phosphoglycerate mutase Caul_3319 3600784 - 3599864 - | histone deacetylase superfamily protein TERM 2350 3599988 - 3599952 - G 74 -12.1 -3.59653 | overlap 3599950 AGCGAGGAAACAATA CGCCCGCCGCAACGGCG GTT CGCCACCGAGGCGATCG CCCGCGTCGCCCAGG TERM 2351 3600414 - 3600387 - G 76 -2.6 -4.76312 | gap 1, overlap 3600388 GAGAACACGCAAAAA CCCATGGCCACGC CCG GCTCGG-CATGGT GGCCCGGCGGCCGCA Caul_3320 3600834 - 3601322 + | GCN5-related N-acetyltransferase Caul_3321 3601507 - 3602685 + | hypothetical protein Caul_3322 3603165 - 3603593 + | hypothetical protein TERM 2352 3603712 - 3603676 - f 86 -11.6 -4.11484 | overlap 3603704 TCGAAGCTCGTAAAA TGGTCCTCATCCTGAG CCTGT CGAAGGACGAGGACCA CGCACGGCGACTACA Caul_3323 3604028 - 3604711 + | TetR family transcriptional regulator Caul_3324 3604844 - 3605719 + | transglutaminase domain-containing protein Caul_3325 3605749 - 3605895 + | hypothetical protein Caul_3326 3606217 - 3605912 - | UvrB/UvrC protein Caul_3327 3606314 - 3607780 + | major facilitator transporter TERM 2353 3607887 - 3607915 + T 100 -24.7 -3.01791 | CGTTTCACGATGGGT CTCGCCCTCTCCC GCT GGGAGAGGGCGAG TCTTGGGGGCGAGCT Caul_3328 3608990 - 3607929 - | Glu/Leu/Phe/Val dehydrogenase dimerisation region TERM 2354 3608177 - 3608208 + g 78 -14.4 -3.61398 | opp_overlap 3608177 TGCCGCGCTCGAACA CCGCCTGGCCGATC GTGC GGTCGGCCAGCTGG TTGTTGGCCCCGCCA Caul_3329 3610246 - 3609215 - | hypothetical protein TERM 2355 3609485 - 3609515 + g 74 -13.2 -3.35679 | opp_overlap 3609477 GAAATAGGCGACCGG GACCTGGACCTTGC CCA GCGAGGCCCAGGCC TTCTCCATCAGCCCG Caul_3330 3610830 - 3610243 - | uracil-DNA glycosylase superfamily protein Caul_3331 3611084 - 3611458 + | response regulator receiver protein Caul_3332 3612109 - 3611477 - | glutathione S-transferase domain-containing protein TERM 2356 3612175 - 3612229 + r 100 -32.5 -3.14344 | gap 1, overlap 3612176 TATTCAAGACTTAGG T-GGCGCTTTGCGTCCTTCGAGGCGC AGCC GAGCCTCGAAGGACGCAAAGCGCCTA TTCCTCGCCGCCCTC TERM 2357 3612176 - 3612227 + r 100 -37.6 -3.13403 | overlap 3612175 ATTCAAGACTTAGGT GGCGCTTTGCGTCCTTCGAGGCGC AGCC GAGCCTCGAAGGACGCAAAGCGCC TATTCCTCGCCGCCC Caul_3333 3612547 - 3612227 - | hypothetical protein Caul_3334 3612662 - 3613111 + | thioesterase superfamily protein TERM 2358 3613159 - 3613215 + T 81 -15.9 -3.05384 | gap 2, opp_overlap 3613150 3613130, overlap 3613164 GGACAAGCGCGTAGC GCGCGGATCCGGGACCG-C-CGGAAGC GCTGA GTTCCCGCGTCGGTCCCGGGTCTTCGC TTCGCTACGCCCGGG TERM 2359 3613164 - 3613210 + T 76 -13.8 -3.19192 | gap 2, opp_overlap 3613130, overlap 3613159 AGCGCGTAGCGCGCG GATCCGGGACCG-C-CGGAAGC GCTGA GTTCCCGCGTCGGTCCCGGGTC TTCGCTTCGCTACGC Caul_3335 3613881 - 3613264 - | glutathione S-transferase domain-containing protein TERM 2360 3613667 - 3613702 + g 73 -12.6 -3.47349 | gap 1, opp_overlap 3613667, overlap 3613664 3613661 3613660 AGGCTTTCCAGATAA CGG-CAGATGGCCACCG ACT CGGTGATCGTCTGGCCG TTGTCCATTTCCAGG TERM 2361 3613976 - 3613950 - R 76 -13.7 -3.14344 | GAGGCCGCTGACTAA GCCCTTCCCCC TTGAT GGGGGAAGGGT TGGGATGGGGGTGAC Caul_3336 3615703 - 3614420 - | Na+ dependent nucleoside transporter TERM 2362 3614714 - 3614728 + g 70 -12.8 -3.33815 | GACGCCCAGCAGGCC GCCGGC GCT GCCGGC TTCCTTCCACGGAAT TERM 2363 3615837 - 3615803 - R 74 -9.9 -3.73775 | opp_overlap 3615802 3615799, overlap 3615804 GGTATGCTTACGAAA CCGCCAGGGTCGAGC TTTCT GCTCGACCTTCGCGC CTGCTGTTCACGCTG TERM 2364 3615836 - 3615804 - R 74 -13.4 -2.84051 | opp_overlap 3615802 3615799, overlap 3615803 GTATGCTTACGAAAC CGCCAGGGTCGAGC TTTCT GCTCGACCTTCGCG CCTGCTGTTCACGCT Caul_3337 3616363 - 3615884 - | calcium-binding EF-hand-containing protein TERM 2365 3617733 - 3617684 - g 70 -9.1 -3.96068 | gap 1, overlap 3617685 CCAGCTGAACAAGAA GGGCGACGGCAAGTTCCGCGCCTG GAC CCGCCA-GGAACTGGCCGACGCCA ATTCCGGAGCCATGC Caul_3338 3616932 - 3618137 + | hypothetical protein TERM 2366 3618542 - 3618502 - g 74 -16.8 -2.71144 | GACGGCCCTGAAGTA CCAGGGCGTCGGCCCG-GGC GAG GCCTCGCGCCG-CGCCCAGG CTGCGCTGGAGGCGG Caul_3339 3618134 - 3618883 + | ABC transporter related TERM 2367 3618955 - 3618969 + G 72 -9.2 -3.99374 | overlap 3618950 ATCGTCTTGCTCGCG GCCGTC GGC GGCGGC TTCTTCTTCATGAAA TERM 2368 3619881 - 3619855 - g 85 -15.8 -3.5394 | overlap 3619843 3619870 AAAGCCGGCGTGAAA CGCGACCAGCCG AAA CCGCCGGTCGCG GGCGGCGAGAAGAAG Caul_3340 3618901 - 3619905 + | secretion protein HlyD family protein Caul_3341 3620092 - 3621000 + | short-chain dehydrogenase/reductase SDR TERM 2369 3621027 - 3621078 + F 100 -18.9 -4.58395 | gap 1, opp_overlap 3621024 GGACCTCATGAATCG GGGCGCGAACAGGACCGACGTATG CTTCC CTTACGTCAGTT-TGTTCGCGCCC TTTTTAGGCAATCAC TERM 2370 3621247 - 3621226 - f 82 -14.4 -3.28912 | TTAGAGCGACAGCAA CCGGCGCC ACCAAG GGCGCCGG AACCTCCTCCCCAGA Caul_3342 3621275 - 3622585 + | membrane protein involved in aromatic hydrocarbon degradation TERM 2371 3622637 - 3622612 - T 83 -17.5 -2.55015 | opp_overlap 3622612, overlap 3622608 AGTTGACGGAATGGA GGCCGTCCGGG GAAA CCCGGGCGGCC TTTTTCTTGTGATCT TERM 2372 3622612 - 3622637 + T 100 -19.7 -5.2291 | opp_overlap 3622608 3622612 AGTTGACGGAATGGA GGCCGTCCGGG GAAA CCCGGGCGGCC TTTTTCTTGTGATCT Caul_3343 3623895 - 3622786 - | hypothetical protein TERM 2373 3623774 - 3623762 - G 71 -10.5 -3.78953 | overlap 3623763 ACCTCCAGCATGAAA CCGGC CCT GCCGG CGCGGACCACCAGGC Caul_3344 3623997 - 3625109 + | HflK protein Caul_3345 3625106 - 3625951 + | HflC protein TERM 2374 3625997 - 3625960 - T 100 -15.5 -4.13767 | opp_overlap 3625961 3625965, overlap 3625936 3625937 3625961 GGGGTGACCTGAAAA CGGGATGGGCCGGCGGA TCGC TCCGCCGGCCCATTTCT GTTCGCTGTCACTCC TERM 2375 3625996 - 3625961 - T 91 -19 -3.08046 | opp_overlap 3625961 3625965, overlap 3625936 3625937 3625960 GGGTGACCTGAAAAC GGGATGGGCCGGCGGA TCGC TCCGCCGGCCCATTTC TGTTCGCTGTCACTC TERM 2376 3625961 - 3625996 + T 100 -23.4 -3.12803 | opp_overlap 3625936 3625937 3625960 3625961, overlap 3625965 GGGTGACCTGAAAAC GGGATGGGCCGGCGGA TCGC TCCGCCGGCCCATTTC TGTTCGCTGTCACTC TERM 2377 3625965 - 3625992 + T 100 -22.8 -4.22678 | opp_overlap 3625936 3625937 3625961 3625960, overlap 3625961 GACCTGAAAACGGGA TGGGCCGGCGGA TCGC TCCGCCGGCCCA TTTCTGTTCGCTGTC Caul_3346 3626977 - 3626312 - | HAD family hydrolase Caul_3347 3627843 - 3626974 - | phosphoserine phosphatase SerB Caul_3348 3628362 - 3627904 - | hypothetical protein Caul_3349 3628420 - 3629349 + | tRNA delta(2)-isopentenylpyrophosphate transferase Caul_3350 3629434 - 3629916 + | CinA domain-containing protein TERM 2378 3630120 - 3630133 + F 100 -8.1 -5.86976 | opp_overlap 3630120 GGTCGCGCGCACAAA GGTCC TTCG GGACC TTTTTTCTTTTCTGC TERM 2379 3630133 - 3630120 - f 71 -8.1 -3.85698 | opp_overlap 3630120 GGTCGCGCGCACAAA GGTCC TTCG GGACC TTTTTTCTTTTCTGC Caul_3351 3630190 - 3631995 + | acetolactate synthase 3 catalytic subunit TERM 2380 3631987 - 3632003 + F 72 -4.3 -4.62772 | overlap 3631984 GCGGCGGGGGCAGGG CTGGTCT AAA AGCCCGG TTTCTTTGCTTTACG TERM 2381 3632657 - 3632635 - g 74 -13.4 -3.31196 | TCAAAGCGAGATCAA CCGCGTGCTG CGC CAGCACGTGG CCAAAGCAGAAAAGA Caul_3352 3632381 - 3632683 + | hypothetical protein Caul_3353 3632684 - 3633232 + | acetolactate synthase 3 regulatory subunit Caul_3354 3633235 - 3634113 + | hypothetical protein Caul_3355 3634194 - 3634634 + | hypothetical protein Caul_3356 3635314 - 3634652 - | major intrinsic protein Caul_3357 3636363 - 3635452 - | AraC family transcriptional regulator Caul_3358 3636567 - 3636875 + | hypothetical protein TERM 2382 3637404 - 3637427 + F 76 -8.1 -4.20918 | overlap 3637380 CGAAGCGCCGCGACG GAGGGGGTC AGCGCC GACGCCCTC TTTCTTAAAATTGAC Caul_3359 3637520 - 3638005 + | hypothetical protein Caul_3360 3638010 - 3638495 + | thioesterase superfamily protein TERM 2383 3638809 - 3638844 + G 80 -18.2 -2.87132 | overlap 3638811 CATGCCGGCCTGCGC GACCTGGCGGCGGGCG CCAC CGCCGGCTGCCTGGTC TATATCACCAGCCAC TERM 2384 3638811 - 3638842 + G 74 -15 -2.98823 | overlap 3638809 TGCCGGCCTGCGCGA CCTGGCGGCGGGCG CCAC CGCCGGCTGCCTGG TCTATATCACCAGCC Caul_3361 3638533 - 3639330 + | peptidase C13, legumain asparaginyl peptidase TERM 2385 3641110 - 3641122 + G 71 -10.5 -3.7941 | CCAGCGCGAGGACGG CCGCG TGT CGCGG TTCTTCTCGCCGATG Caul_3362 3639464 - 3641617 + | beta-lactamase TERM 2386 3641775 - 3641761 - f 73 -3.5 -4.74504 | overlap 3641763 3641764 AGCGGAATCTAAAAA CAGGC ATGCG ACCTG CACCGCCCTCCCCGG Caul_3363 3641815 - 3642204 + | hypothetical protein Caul_3364 3642564 - 3642166 - | endodeoxyribonuclease RusA Caul_3365 3642890 - 3642567 - | hypothetical protein TERM 2387 3643070 - 3643038 - R 71 -13.4 -2.52464 | opp_overlap 3643037 3643036, overlap 3643014 GCCGCTGTGAAGCTA GCCCTCGTCCTGAG CTTGT CGAAGGACGAGGGC GGTTCATTGGCGGCG Caul_3366 3643642 - 3643103 - | hypothetical protein Caul_3367 3643769 - 3645160 + | fumarate hydratase Caul_3368 3645166 - 3645612 + | GCN5-related N-acetyltransferase Caul_3369 3645609 - 3646292 + | phytanoyl-CoA dioxygenase Caul_3370 3646289 - 3647029 + | AAA ATPase Caul_3371 3647061 - 3647303 + | post-segregation antitoxin CcdA Caul_3372 3647300 - 3647614 + | hypothetical protein Caul_3373 3648019 - 3647618 - | hypothetical protein TERM 2388 3648043 - 3648088 + H 100 -22 -5.46706 | opp_overlap 3648053 CCAAAGGGCGAGCGG CCTGGAGCAAGTCGCGCGAT ATAAGA ATCGCCCGCCTTGCTCCAGG TTTTTGTTTTCGCAT TERM 2389 3648277 - 3648248 - H 100 -16.3 -4.93877 | overlap 3648249 GGGCACGAAACAAAA CGCGCCGCGCGCG ATTC CGCGCGCCGCGCC GCCACGAGGACACGA TERM 2390 3648276 - 3648249 - H 100 -19.8 -3.55603 | overlap 3648248 GGCACGAAACAAAAC GCGCCGCGCGCG ATTC CGCGCGCCGCGC CGCCACGAGGACACG Caul_3374 3648292 - 3649146 + | FkbM family methyltransferase TERM 2391 3649236 - 3649284 + T 100 -16.8 -4.14739 | overlap 3649219 3649229 GAAGCGCGGCGCTCA GGC-GTCGGTCCCGGATCGGCGCG CTT CGCGCTTGTCCGGGAT-GACAGCC TTTTGAGCTACCTGA Caul_3375 3649894 - 3649292 - | hypothetical protein Caul_3376 3650862 - 3649894 - | polyprenyl synthetase Caul_3377 3651070 - 3651807 + | methyltransferase small Caul_3378 3652527 - 3651964 - | nucleoside 2-deoxyribosyltransferase TERM 2392 3652913 - 3652945 + G 73 -16.1 -2.66316 | opp_overlap 3652900, overlap 3652911 GACCCCGGAAGGCTT CGGCCCCGCCGCCCG GGT CGGGCTGCTGGCCCG TGATCTGGTCGGCGC Caul_3379 3652578 - 3653402 + | SCP-like extracellular Caul_3380 3653836 - 3653366 - | hypothetical protein TERM 2393 3653783 - 3653771 - G 75 -4.7 -4.58297 | overlap 3653773 GATGAAAAATAGAAA CGTCG ACG CGCCG AAGCCCGCGAGAACG TERM 2394 3653925 - 3653960 + r 91 -15.4 -3.86897 | opp_overlap 3653930 3653931, overlap 3653931 GGCTGTCCCGCAAAC GAAAAGCGGCGGGCTC TCGC GAGCCCGCCGTTCGTC TTTGTCAGCGATAAA TERM 2395 3653955 - 3653930 - R 100 -16.1 -4.54727 | opp_overlap 3653925 3653931, overlap 3653931 TCCCGCAAACGAAAA GCGGCGGGCTC TCGC GAGCCCGCCGT TCGTCTTTGTCAGCG TERM 2396 3653954 - 3653931 - R 95 -19.6 -3.32354 | opp_overlap 3653925 3653931, overlap 3653930 CCCGCAAACGAAAAG CGGCGGGCTC TCGC GAGCCCGCCG TTCGTCTTTGTCAGC TERM 2397 3653931 - 3653954 + r 100 -19.6 -3.50335 | opp_overlap 3653931 3653930, overlap 3653925 CCCGCAAACGAAAAG CGGCGGGCTC TCGC GAGCCCGCCG TTCGTCTTTGTCAGC Caul_3381 3655004 - 3653985 - | ketol-acid reductoisomerase Caul_3382 3656131 - 3655292 - | hypothetical protein TERM 2398 3655722 - 3655748 + g 73 -12.9 -3.40403 | TCGGGGCGGCCCTGA CCGGGGCCGCG ACCGC CGCCGCCCTGG TTCTGGTCGCCGCGA TERM 2399 3656764 - 3656780 + G 70 -9.3 -3.91897 | TGGGCCGCGCCACGA CGCCGGC CGA GCAGGCG TTTCTGGATGAAGGC Caul_3383 3656256 - 3656810 + | hypothetical protein Caul_3384 3656882 - 3657832 + | hypothetical protein TERM 2400 3657876 - 3657857 - f 77 -15 -2.88231 | opp_overlap 3657857, overlap 3657849 ACCACAACGACGAGA CGGCCTCC GGAG GGAGGCCG TTTTGCTGTGGACGA TERM 2401 3657857 - 3657876 + F 100 -15 -4.34402 | opp_overlap 3657849 3657857 ACCACAACGACGAGA CGGCCTCC GGAG GGAGGCCG TTTTGCTGTGGACGA Caul_3385 3657957 - 3658808 + | thymidylate synthase Caul_3386 3658805 - 3659233 + | thioesterase superfamily protein TERM 2402 3659647 - 3659705 + G 70 -3.5 -4.41616 | overlap 3659649 3659693 GGTCTTCGAACTGGC CCTGCCCCGCGCCAAGCGCCTCTACCT GACCG AGGTGCAGGCGCAGGTCGAGGGCGACG TTTATTTCCCCGCCT Caul_3387 3659303 - 3659818 + | dihydrofolate reductase Caul_3388 3659818 - 3660216 + | hypothetical protein Caul_3389 3660371 - 3661282 + | SMP-30/gluconolaconase/LRE domain-containing protein Caul_3390 3661383 - 3662174 + | short-chain dehydrogenase/reductase SDR TERM 2403 3662259 - 3662239 - T 74 -12.5 -3.36839 | overlap 3662237 3662235 3662240 GGATCAAACAACAGA TGCTCCCCC TCT GGGGGAGCT GTCGCGGAGCGACTG TERM 2404 3662258 - 3662240 - T 80 -16 -2.6138 | overlap 3662239 3662237 3662235 GATCAAACAACAGAT GCTCCCCC TCT GGGGGAGC TGTCGCGGAGCGACT TERM 2405 3662276 - 3662298 + T 75 -14.8 -2.7185 | TCGCGGAGCGACTGA GGGGGCCTGC GGC GCAAGCCCCC TCATTGCCGCCTAGT Caul_3391 3663400 - 3662309 - | NADH:flavin oxidoreductase/NADH oxidase Caul_3392 3664814 - 3663603 - | acyl-CoA dehydrogenase domain-containing protein TERM 2406 3663731 - 3663690 - G 76 -13.6 -3.39844 | gap 1, opp_overlap 3663695 3663698, overlap 3663688 GCGATAGCTGAAATA GGCCGGGGCGG-CCGGGCC GGCGT AGTCCGGTCCAGCCCGGCC GTCATTGCTCGCCGC Caul_3393 3665109 - 3664819 - | antibiotic biosynthesis monooxygenase Caul_3394 3665809 - 3665522 - | hypothetical protein Caul_3395 3666619 - 3665924 - | heat shock protein DnaJ domain-containing protein TERM 2407 3667576 - 3667533 - g 75 -8.9 -4.21989 | gap 3, overlap 3667560 TACAACGTCAAGAAA GGCGAGGCT-CCGGC--CTCCG AAG CGAAACCGCCGGAAGCCGCGCC GGCGGACCTGACGCC TERM 2408 3667581 - 3667560 - g 71 -10.1 -3.75153 | overlap 3667533 GCCTCCGAAGCGAAA CCGCCGG AAGCCGCG CCGGCGG ACCTGACGCCGTACG TERM 2409 3667751 - 3667712 - g 83 -14.8 -3.61398 | GCCGGTCGCCAAGAA GACGGCCAGCGCGCCCGC TCCG GAGGCCGCGCCGGTCGCC GAGGCCGAACCCGCC Caul_3396 3666999 - 3667961 + | hypothetical protein Caul_3397 3669414 - 3667966 - | beta-galactosidase TERM 2410 3668676 - 3668713 + g 74 -13.3 -3.29947 | GCAGGTCGCCGCGCG CCGCGCGCAGGGCCTGG ATCG CCAGCCCCTGTCCGAGG TTCATGTGGTGGGTG Caul_3398 3671344 - 3669512 - | hypothetical protein TERM 2411 3670685 - 3670696 + g 73 -7.2 -4.1043 | overlap 3670674 GTCGGCGATCGGCTG GGCG CGGG CGCC TTTCTGCTGTTTCAG Caul_3399 3672463 - 3671375 - | peptidase M48 Ste24p Caul_3400 3673538 - 3672465 - | hypothetical protein Caul_3401 3673685 - 3674308 + | LysR family transcriptional regulator TERM 2412 3674544 - 3674526 - T 100 -6 -5.40072 | overlap 3674527 3674530 GGTCGGTCAAAAAAA CGATCGAT GAC ATCCATCG CATCCGCCAGGCTCG TERM 2413 3674644 - 3674665 + T 76 -12.9 -3.51329 | overlap 3674663 3674664 CGTCTACGCCGCCTC CCCCCGCGC CTTG GCGCCGGGG TTGTAGTTGAGGATC Caul_3402 3677301 - 3674632 - | methionine synthase Caul_3403 3677699 - 3677298 - | hypothetical protein Caul_3404 3678697 - 3677702 - | D-alanine--D-alanine ligase TERM 2414 3677917 - 3677973 + g 70 -15.6 -2.81642 | CGGTCTTGTGGGCCT TCAGCGCGGCCTCCTGCATGGCGGCG TTGAC CGCCGGCGCGAAGGTGGCCGGGCAGA TCTCCTCCGTGGTCT Caul_3405 3679146 - 3678697 - | PilT-like protein TERM 2415 3679075 - 3679087 + g 75 -10.5 -4.07885 | opp_overlap 3679068 TCGCACAACGACTTC GGCCG TCG CGGCC TTTTCGGGCGCCCTG Caul_3406 3679589 - 3679143 - | hypothetical protein Caul_3407 3680729 - 3679653 - | homocysteine S-methyltransferase TERM 2416 3680320 - 3680334 + g 73 -7 -4.12902 | opp_overlap 3680317 3680328, overlap 3680328 GGACCGATCGAACCG GCCACG AAG CGCGGC TTTTCCGGCTCCTTG Caul_3408 3681701 - 3680835 - | Beta-lactamase Caul_3409 3682660 - 3681698 - | 5,10-methylenetetrahydrofolate reductase Caul_3410 3683646 - 3682657 - | ArsR family transcriptional regulator Caul_3411 3684118 - 3683744 - | hypothetical protein Caul_3412 3685108 - 3684149 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Caul_3413 3685343 - 3685756 + | hypothetical protein TERM 2417 3685766 - 3685802 + T 100 -16.5 -4.2558 | opp_overlap 3685770 3685773 AAGTAGGCATAGAGA CGAAGAAGGGGCGGTCC CCG GGACCGCCCCTTCAAAG TTTTCCTGAGAAATA TERM 2418 3685798 - 3685770 - T 100 -24.7 -3.35465 | opp_overlap 3685766, overlap 3685773 AGGCATAGAGACGAA GAAGGGGCGGTCC CCG GGACCGCCCCTTC AAAGTTTTCCTGAGA TERM 2419 3685795 - 3685773 - T 100 -20.6 -3.81089 | opp_overlap 3685766, overlap 3685770 CATAGAGACGAAGAA GGGGCGGTCC CCG GGACCGCCCC TTCAAAGTTTTCCTG Caul_3414 3687491 - 3685824 - | putative ABC transporter ATP-binding protein Caul_3415 3687726 - 3690104 + | TonB-dependent receptor TERM 2420 3690158 - 3690127 - f 95 -20.2 -3.24924 | opp_overlap 3690114 3690128 3690131, overlap 3690128 3690131 GCGTCATCGACAAGA CGAAGGGCCGGAGG GTGA CCTCCGGCCCTTCT GATTTGCCAAGCCCT TERM 2421 3690128 - 3690157 + F 100 -23.7 -2.90496 | opp_overlap 3690127 3690128 3690131, overlap 3690114 3690131 CGTCATCGACAAGAC GAAGGGCCGGAGG GTGA CCTCCGGCCCTTC TGATTTGCCAAGCCC TERM 2422 3690157 - 3690128 - f 100 -23.7 -2.5474 | opp_overlap 3690128 3690114 3690131, overlap 3690127 3690131 CGTCATCGACAAGAC GAAGGGCCGGAGG GTGA CCTCCGGCCCTTC TGATTTGCCAAGCCC TERM 2423 3690154 - 3690131 - f 100 -19.6 -3.42459 | opp_overlap 3690131 3690128 3690114, overlap 3690128 3690127 CATCGACAAGACGAA GGGCCGGAGG GTGA CCTCCGGCCC TTCTGATTTGCCAAG TERM 2424 3690131 - 3690154 + F 100 -19.6 -3.60151 | opp_overlap 3690128 3690127 3690131, overlap 3690128 3690114 CATCGACAAGACGAA GGGCCGGAGG GTGA CCTCCGGCCC TTCTGATTTGCCAAG Caul_3416 3690379 - 3691146 + | signal peptidase I Caul_3417 3691481 - 3691143 - | hypothetical protein TERM 2425 3691558 - 3691539 - H 100 -12.8 -4.85782 | GCGGGCAAAAAGAAA GCCCGGCC AAAG GACCGGGC TTGAAGTCATTGGGG TERM 2426 3693227 - 3693211 - g 76 -7.9 -4.26327 | GATCGAGGAAAACAA GCTGGCC GAA GGCCATC CCTACTGGCCCTACG Caul_3418 3691808 - 3694024 + | peptidase S9B dipeptidylpeptidase IV subunit TERM 2427 3694835 - 3694804 - f 70 -11.6 -3.21924 | gap 1, overlap 3694802 3694807 3694831 3694834 GGAGCCTTCACAACA GAGCGCTCTTCCCCC TGT GGGGGAAGA-CGACC GCGAAGCGGTCCGTA TERM 2428 3694832 - 3694807 - f 71 -14.1 -2.50074 | gap 1, overlap 3694804 3694802 3694831 GCCTTCACAACAGAG CGCTCTTCCCCC TGT GGGGGAAGA-CG ACCGCGAAGCGGTCC Caul_3419 3694936 - 3695718 + | hypothetical protein TERM 2429 3695979 - 3695968 - g 89 -7.2 -4.82901 | CTTCGCCGACAAAAA GGCG ACCA CGCC CGAGGAATTCCTCAA Caul_3420 3695867 - 3697498 + | amidase Caul_3421 3698238 - 3697675 - | hypothetical protein Caul_3422 3699671 - 3698235 - | hypothetical protein Caul_3423 3701176 - 3699668 - | Sel1 domain-containing protein TERM 2430 3701316 - 3701294 - H 76 -7.8 -4.3739 | opp_overlap 3701305 GATCTGTTCACAAAA GGATTCAC GTCCCGG GTGAATCC TCCGGTTTCAAGTCA TERM 2431 3703088 - 3703129 + G 72 -13.5 -3.18681 | GTCACCGCCCTCGCC CAGGGCGCGCGGGGCGAAG ACCC CTACGGCCTGCGCGCCGAG TTCGTGCAGTTGACC Caul_3424 3701396 - 3703174 + | von Willebrand factor type A Caul_3425 3704890 - 3703181 - | hypothetical protein Caul_3426 3706190 - 3704967 - | acyl-CoA dehydrogenase domain-containing protein Caul_3427 3707450 - 3706335 - | acyl-CoA dehydrogenase domain-containing protein Caul_3428 3707598 - 3708167 + | hypothetical protein Caul_3429 3709081 - 3708164 - | abortive infection protein TERM 2432 3711281 - 3711326 + G 71 -11.8 -3.59979 | GCTGCTGCGACCTGC TGGCCGCCGATCCGCACG CTGTCAATGT CGAGCGCATCGTCGGCCA TTTCGAGTCGGCCGC Caul_3430 3709240 - 3711831 + | aminopeptidase N TERM 2433 3711936 - 3711897 - f 81 -6.5 -4.72272 | opp_overlap 3711925 GGTTGCGACTAAAAA GCC-CATCCCCGGCAAAAC CTCG GTTCTGC-GGTGACGCGGC CCTTCCGCGTGCGGT Caul_3431 3712006 - 3714540 + | PAS/PAC sensor signal transduction histidine kinase Caul_3432 3714548 - 3714868 + | low molecular weight phosphotyrosine protein phosphatase Caul_3433 3715380 - 3714865 - | hypothetical protein Caul_3434 3715586 - 3715927 + | ArsR family transcriptional regulator Caul_3435 3715952 - 3716425 + | activator of Hsp90 ATPase 1 family protein TERM 2434 3716475 - 3716442 - f 91 -16.7 -3.55548 | overlap 3716443 GAAGACCGCGCCAAA CGCTGGGGACACGCC CATG GGCGTGTCCCCATCC AATCGATGGAGACCC TERM 2435 3716474 - 3716443 - f 90 -20.2 -2.73007 | overlap 3716442 AAGACCGCGCCAAAC GCTGGGGACACGCC CATG GGCGTGTCCCCATC CAATCGATGGAGACC Caul_3436 3716492 - 3717139 + | glutathione S-transferase domain-containing protein Caul_3437 3717777 - 3717151 - | glutathione S-transferase domain-containing protein TERM 2436 3718906 - 3718918 + G 70 -9.1 -3.93638 | CGAACCGATCGCTAC GCCGA AGC TCGGC TTTATCGCCTTCATT TERM 2437 3719363 - 3719401 + G 74 -10.9 -3.72324 | gap 1, opp_overlap 3719356 3719357, overlap 3719366 GTCCAGAACTCGGTC GAGCCGCGGCGCCG-GGC CACC GCCACGGCCCTGCTGTTC TTCTTCCTCAACCTG TERM 2438 3719366 - 3719398 + G 72 -9 -3.99374 | gap 1, opp_overlap 3719356 3719357, overlap 3719363 CAGAACTCGGTCGAG CCGCGGCGCCG-GGC CACC GCCACGGCCCTGCTG TTCTTCTTCCTCAAC Caul_3438 3718235 - 3719755 + | major facilitator transporter TERM 2439 3719786 - 3719806 + F 70 -12.5 -2.90075 | CCGGCCCTACGGGCC ACCTCCCCC AGA GGGGGAGGA TCTGATTGAGCGCCG TERM 2440 3719853 - 3719833 - f 71 -12.5 -2.98823 | opp_overlap 3719837 GCCGCGCCAGATAGA TGCTCCCCC TCT GGGGGAGCT GTCGCGCAGCGACTG Caul_3439 3720670 - 3721980 + | adenylosuccinate lyase TERM 2441 3722073 - 3722020 - f 74 -13.2 -3.28712 | opp_overlap 3722002 3721999 3722020 3722061, overlap 3722061 CTCGTCCTTCGACAA GCTCAGGATGAGGGCTACTTTTGC GCCATG GCAGTAGGAAACCTCATCCTGAGC TTGTCGAAGGACGAG TERM 2442 3722020 - 3722073 + F 74 -13.2 -3.28712 | opp_overlap 3722020 3722061, overlap 3722002 3721999 3722061 CTCGTCCTTCGACAA GCTCAGGATGAGGGCTACTTTTGC GCCATG GCAGTAGGAAACCTCATCCTGAGC TTGTCGAAGGACGAG Caul_3440 3722114 - 3722614 + | uracil-DNA glycosylase superfamily protein TERM 2443 3722770 - 3722796 + G 73 -7.8 -4.15044 | overlap 3722771 TGATGCGCATTTTCC TGCTGGCCGCCG TCT CGGCGGTCGCCC TTTCTTCCACGGCCC Caul_3441 3722754 - 3724757 + | endothelin-converting protein 1 TERM 2444 3724794 - 3724773 - T 100 -14.4 -4.89567 | opp_overlap 3724773 TCGCAAAAGACAAAA GGGCCGCC TCGAGG GGCGGCCC TTTCTGCATCGAAAG TERM 2445 3724773 - 3724794 + T 91 -15.1 -3.91897 | opp_overlap 3724773 TCGCAAAAGACAAAA GGGCCGCCT CGAG GGGCGGCCC TTTCTGCATCGAAAG Caul_3442 3725138 - 3724821 - | hypothetical protein TERM 2446 3725319 - 3725357 + H 100 -12.3 -4.41348 | overlap 3725325 3725326 TGAGCGGCCTTGAGT CGAACGCCGCGCGCAGC TATCC GCCGCGCGCGCTTTTCG TTTCTTTGGACAAGA TERM 2447 3725325 - 3725351 + H 100 -10.7 -4.72863 | overlap 3725319 3725326 GCCTTGAGTCGAACG CCGCGCGCAGC TATCC GCCGCGCGCGC TTTTCGTTTCTTTGG TERM 2448 3725326 - 3725350 + H 83 -14.2 -3.42091 | overlap 3725325 3725319 CCTTGAGTCGAACGC CGCGCGCAGC TATCC GCCGCGCGCG CTTTTCGTTTCTTTG Caul_3443 3725407 - 3726165 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Caul_3444 3726320 - 3726559 + | phosphoribosylformylglycinamidine synthase, purS Caul_3445 3727201 - 3726575 - | TetR family transcriptional regulator TERM 2449 3727263 - 3727246 - H 95 -10.5 -4.60258 | CTAGCAAATAACAAA GGCGGCC GCAG AGCCGCC CCCGGAGGAGCCAGG Caul_3446 3727288 - 3728562 + | cytochrome P450 Caul_3447 3728570 - 3728746 + | rubredoxin-type Fe(Cys)4 protein Caul_3448 3728833 - 3729318 + | hypothetical protein TERM 2450 3729414 - 3729367 - f 76 -13.5 -3.19371 | gap 2 ACGCAGCGAAGCGAA GATCCGGGACCGCCG-G-AAGCG CCTG CGTTCACGCGTCGGTCCCGGATC GGCGCGCTACGCGAT Caul_3449 3729498 - 3730160 + | phosphoribosylformylglycinamidine synthase I TERM 2451 3731308 - 3731353 + G 70 -8.2 -3.86524 | opp_overlap 3731305 3731306 GGGAGCGATCAAGTT CGGCGCCGACACCGCCCT-GCG GTTT CGCCAGGAC-GTGCTGGCCCCG TTTCTGGCCCACTAT Caul_3450 3730244 - 3732175 + | X-Pro dipeptidyl-peptidase domain-containing protein Caul_3451 3732273 - 3734186 + | peptidase S15 TERM 2452 3734193 - 3734226 + T 100 -17.4 -3.54741 | GCTCAGTAGGGTTCA GCGCCCGGAAGGCT CCCTCC GGCCCTCCGGGCGC TTTGGCGAACTGCTC TERM 2453 3734610 - 3734638 + T 100 -18.2 -3.89215 | overlap 3734604 GGGATACTCGGACGG CGGCCCGCTCTT TTGCC GAGAGCGGGCCG TTTCCGTTTCTGGGC TERM 2454 3734774 - 3734807 + T 83 -4.7 -5.01732 | opp_overlap 3734764 3734774, overlap 3734792 3734793 CGAAATCTGCACCAA TCGCAGAATTCAG TCAGCACC TTCAATTCTGCGA TTTTTTCGCAGAATT Caul_3452 3736219 - 3735617 - | phosphoglycerate mutase TERM 2455 3736301 - 3736276 - R 100 -17.5 -4.56597 | CGGGTTCCCGAAAAA GGGCCGGAGGC TTTC GCCGCCGGCCC TCCCTCACATTCACG Caul_3453 3737181 - 3736585 - | peptidyl-prolyl cis-trans isomerase cyclophilin type Caul_3454 3737576 - 3737178 - | PilT domain-containing protein TERM 2456 3737300 - 3737272 - G 79 -4.7 -4.80882 | opp_overlap 3737275, overlap 3737275 AGCGCATAGGAAAAA CAGTCGC-CGAAG TTCAG CTTCGCGCGA-TG TCGTCCTCTGCCAAA TERM 2457 3737545 - 3737516 - G 71 -2.1 -4.56597 | gap 1, overlap 3737517 3737518 TCGCTTCGGTAAAAA CG-TCGCGATCAAC TTC GTTGAGGACGATCG CCATTAGAGCCGACG TERM 2458 3740002 - 3740042 + G 76 -14.1 -3.42621 | gap 2, opp_overlap 3739980 TCCACGCCAATGTCG CGGGCGCCGTCGGCGGCGA CGACT TCGCC-TCGACGG-GCCTG TTCTCCATTCCCATT Caul_3455 3737904 - 3740117 + | phosphoribosylformylglycinamidine synthase II Caul_3456 3740129 - 3740485 + | putative secreted protein TERM 2459 3740589 - 3740542 - T 100 -14.1 -5.09259 | opp_overlap 3740552, overlap 3740543 GATGCGAAAACAAAA GCCTGGAGCAAGCCGTGCGAT TCCTAC ACCGCGCGGCCTGCTCTAGGG CTTGGCGACCGCCTC TERM 2460 3740588 - 3740543 - T 100 -17.6 -3.64471 | opp_overlap 3740552, overlap 3740542 ATGCGAAAACAAAAG CCTGGAGCAAGCCGTGCGAT TCCTAC ACCGCGCGGCCTGCTCTAGG GCTTGGCGACCGCCT Caul_3457 3740781 - 3740584 - | hypothetical protein TERM 2461 3740673 - 3740699 + g 90 -17.3 -3.53012 | opp_overlap 3740671 AGTGGTTGACGAAGT CGCCCAGCGCG CCCGT CGCGCTGGGTG TTTCCACCAAGGGCG Caul_3458 3742265 - 3740904 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Caul_3459 3742906 - 3742391 - | HxlR family transcriptional regulator Caul_3460 3743023 - 3743832 + | short-chain dehydrogenase/reductase SDR TERM 2462 3743904 - 3743941 + G 80 -17 -2.90723 | gap 1 GTCCGCCGACTGGGA GGCCTGG-CTGGCGGCG CAACC CGCCGACAGTCCGGGCC TGTGGTTGAAGCTAG TERM 2463 3744381 - 3744363 - g 70 -12.4 -3.37796 | CGCCAGGACCGACAA GACCCGCG CGG CGCGGATC GACAAGTTCGTCACG Caul_3461 3743845 - 3744444 + | hypothetical protein Caul_3462 3744498 - 3744695 + | hypothetical protein Caul_3463 3745799 - 3744870 - | peptidase M28 Caul_3464 3745963 - 3746199 + | BolA family protein TERM 2464 3746362 - 3746326 - g 72 -8.6 -4.08767 | gap 1, overlap 3746327 TTCAGCGCTGGAAAA TGGCGTCAACGCCTTCG AATT CGACGGCG-TGTCGCCG GCCCTGATCGAGGGC Caul_3465 3746204 - 3747097 + | hypothetical protein Caul_3466 3747175 - 3747516 + | glutaredoxin-like protein Caul_3467 3747513 - 3747620 + | hypothetical protein Caul_3468 3747659 - 3749374 + | recombinase Caul_3469 3749780 - 3750172 + | hypothetical protein TERM 2465 3750323 - 3750343 + G 72 -6.2 -4.25104 | gap 1 TCCCAGTGATGGAGA CGATCAGCC GAGA GG-TGATCG TTTTCGTCCAGACCG Caul_3470 3750178 - 3750501 + | hypothetical protein Caul_3471 3750517 - 3753201 + | hypothetical protein Caul_3472 3753213 - 3753494 + | hypothetical protein Caul_3473 3753690 - 3753499 - | hypothetical protein TERM 2466 3753972 - 3753949 - g 72 -5.9 -4.27316 | overlap 3753950 GCGCTGAATGCAAAA GGCCCGCTG TTCGTT CAGCGAGCT TGCCGGGCAGTCCAG Caul_3474 3753841 - 3754182 + | hypothetical protein TERM 2467 3754217 - 3754188 - T 100 -20.8 -3.69323 | GGATTATTAGGCAAA GCGAAGCCCCGC CCTCGC GCGGGGCTTCGC CATGACCGGCGCTAA TERM 2468 3754573 - 3754592 + T 88 -7.8 -4.82901 | opp_overlap 3754573 TAGCACTCAAGGAAA TGGCCCTT GCTA GGGGGCCA TTTTTGTCGAGGGGC Caul_3475 3755011 - 3754619 - | hypothetical protein Caul_3476 3755617 - 3755093 - | integrase family protein TERM 2469 3755391 - 3755341 - G 78 -8.3 -4.28548 | gap 2, opp_overlap 3755346 3755349, overlap 3755343 3755344 3755346 AGGCATTCAGGAAAA CA-CGACCCGCGC-GCCCCTGTAGA TGC TCAACAAGGGCAGCGCTGATCTCTG GGGTAACGGGCAAGC TERM 2470 3755388 - 3755343 - G 74 -11.1 -3.745 | gap 1, opp_overlap 3755346 3755349, overlap 3755341 3755344 3755346 GCATTCAGGAAAACA CGACCCGCGC-GCCCCTGTAGA TGC TCAACAAGGGCAGCGCTGATCT CTGGGGTAACGGGCA TERM 2471 3755387 - 3755344 - G 72 -14.6 -2.84218 | gap 1, opp_overlap 3755346 3755349, overlap 3755343 3755341 3755346 CATTCAGGAAAACAC GACCCGCGC-GCCCCTGTAGA TGC TCAACAAGGGCAGCGCTGATC TCTGGGGTAACGGGC Caul_3477 3755779 - 3756288 + | hypothetical protein Caul_3478 3756503 - 3756883 + | hypothetical protein TERM 2472 3757884 - 3757908 + T 70 -7.3 -4.07885 | opp_overlap 3757884 TCCATCAGTCAACCA CTCTTTTCA CCTTATT TGAAAAGAG TTTTCCACCACAATC Caul_3479 3758757 - 3758377 - | hypothetical protein TERM 2473 3759226 - 3759215 - R 75 -3.6 -4.86731 | overlap 3759221 GGGCGGGAAACAAAA CCAG AACG CCGG AGCGGAGTCGAGTCT Caul_3480 3759464 - 3759240 - | hypothetical protein Caul_3481 3759961 - 3759464 - | hypothetical protein Caul_3482 3760053 - 3760595 + | hypothetical protein TERM 2474 3761855 - 3761839 - g 79 -8 -4.39696 | CCCGAAATGAAGAAA TCGCCT GACCG AGGCGA CGCATTTACGCAGGG Caul_3483 3760585 - 3761946 + | hypothetical protein Caul_3484 3761999 - 3763381 + | portal protein Caul_3485 3763420 - 3764154 + | HK97 family phage prohead protease Caul_3486 3764291 - 3765475 + | HK97 family phage major capsid protein TERM 2475 3765503 - 3765525 + F 100 -14.1 -4.614 | opp_overlap 3765503 GTCTCACTCTAGGAA CCCCGGCGG CACGT TCGCCGGGG TTTTCTGTGATTGCG TERM 2476 3765525 - 3765503 - f 76 -13.4 -3.16564 | opp_overlap 3765503 GTCTCACTCTAGGAA CCCCGGCG GCACGTT CGCCGGGG TTTTCTGTGATTGCG Caul_3487 3765621 - 3766247 + | hypothetical protein Caul_3488 3766307 - 3766936 + | hypothetical protein Caul_3489 3766929 - 3767243 + | hypothetical protein Caul_3490 3767240 - 3767587 + | HK97 family phage protein Caul_3491 3767584 - 3767946 + | hypothetical protein Caul_3492 3768008 - 3768463 + | hypothetical protein Caul_3493 3768465 - 3768842 + | hypothetical protein TERM 2477 3769072 - 3769047 - f 81 -11.8 -3.85698 | opp_overlap 3769048, overlap 3769048 3769050 GTCTCTTCGGATAAA CGAGCCGGGC TGCAAG GCCCGGCTCT TCTATGTCGCGCGGT TERM 2478 3769071 - 3769048 - f 79 -15.3 -2.91276 | opp_overlap 3769048, overlap 3769047 3769050 TCTCTTCGGATAAAC GAGCCGGGC TGCAAG GCCCGGCTC TTCTATGTCGCGCGG TERM 2479 3769048 - 3769071 + F 91 -16 -3.58726 | opp_overlap 3769048 3769047 3769050 TCTCTTCGGATAAAC GAGCCGGGCT GCAA GGCCCGGCTC TTCTATGTCGCGCGG Caul_3494 3769126 - 3771684 + | hypothetical protein Caul_3495 3771689 - 3772021 + | hypothetical protein TERM 2480 3772437 - 3772427 - g 72 -4.6 -4.49937 | overlap 3772419 TTAAGAACATCAAAA GCGA TGG CCGC AAGCTCGTCCTAGAA Caul_3496 3772021 - 3772548 + | hypothetical protein Caul_3497 3772545 - 3773336 + | NLP/P60 protein Caul_3498 3773302 - 3776184 + | Phage-related protein tail component-like protein Caul_3499 3776192 - 3778693 + | hypothetical protein Caul_3500 3779149 - 3781848 + | hypothetical protein Caul_3501 3781848 - 3782384 + | hypothetical protein Caul_3502 3782409 - 3782780 + | hypothetical protein Caul_3503 3782800 - 3782991 + | hypothetical protein Caul_3504 3782998 - 3783264 + | hypothetical protein TERM 2481 3783320 - 3783281 - f 79 -9.2 -4.13995 | opp_overlap 3783289 3783293, overlap 3783284 3783289 GTTGCACAAAGGAAA CACGCAAAGGCCTCGTCG GAAA CGGCGAGGCCTTTTCCTT GACGATTAGCTAAGC TERM 2482 3783317 - 3783284 - f 78 -15.3 -2.79117 | opp_overlap 3783289 3783293, overlap 3783281 3783289 GCACAAAGGAAACAC GCAAAGGCCTCGTCG GAAA CGGCGAGGCCTTTTC CTTGACGATTAGCTA TERM 2483 3783289 - 3783312 + F 100 -16 -4.41895 | opp_overlap 3783289 3783284 3783281, overlap 3783293 AAGGAAACACGCAAA GGCCTCGTCG GAAA CGGCGAGGCC TTTTCCTTGACGATT TERM 2484 3783312 - 3783289 - f 86 -13.8 -3.82811 | opp_overlap 3783289 3783293, overlap 3783284 3783281 AAGGAAACACGCAAA GGCCTCGTCG GAAA CGGCGAGGCC TTTTCCTTGACGATT Caul_3505 3783442 - 3784377 + | hypothetical protein TERM 2485 3784407 - 3784382 - T 100 -19.1 -4.1822 | opp_overlap 3784382 CCGTAGCCTAACAAA TGGCCCCAGGA GCGA TCCTGGGGCCA TTATTCGTTCTACTT TERM 2486 3784382 - 3784407 + T 100 -19.1 -3.87584 | opp_overlap 3784382 CCGTAGCCTAACAAA TGGCCCCAGGA GCGA TCCTGGGGCCA TTATTCGTTCTACTT Caul_3506 3785856 - 3784417 - | hypothetical protein TERM 2487 3786488 - 3786469 - H 100 -12.8 -5.1675 | TCAGTCATGAAAAAA CCCCGACG CGAA CGCCGGGG CTGTGGGGCTTGAGC TERM 2488 3786589 - 3786566 - H 100 -9.5 -5.00895 | opp_overlap 3786566, overlap 3786560 CTTATCAGAGAAAAA CCCCGGCGC ATTTAA GCACCGAGG TTTCCCGTGAACTAG TERM 2489 3787081 - 3787064 - g 76 -2.7 -4.79955 | gap 1, opp_overlap 3787065, overlap 3787065 ATACCGAGAACAAAA CCTGCAAT TCC ATCGC-GG TCGTTTTCCCGCTTG Caul_3507 3786745 - 3787437 + | hypothetical protein TERM 2490 3787614 - 3787589 - f 76 -7.5 -4.38927 | opp_overlap 3787589 CCGTGAGACAACAAA CACCTTCTCCT ACAA AGGGGGAGGTG TTTTGTCATATCAGA TERM 2491 3787589 - 3787614 + F 100 -11.9 -4.50976 | opp_overlap 3787589 CCGTGAGACAACAAA CACCTTCTCCT ACAA AGGGGGAGGTG TTTTGTCATATCAGA Caul_3508 3787612 - 3788010 + | hypothetical protein Caul_3509 3788507 - 3788136 - | hypothetical protein Caul_3510 3788584 - 3789726 + | beta-lactamase TERM 2492 3789750 - 3789794 + T 75 -13.6 -3.06183 | CTTGCCTTCCCGGCG CGCGAAGTCCTCGTCCTTCG ACAGG CTCAGGATGAGGACTTCGAG TTCAGTCGCCGTAAA Caul_3511 3790161 - 3789823 - | hypothetical protein Caul_3512 3791240 - 3790311 - | peptidase M48 Ste24p Caul_3513 3791561 - 3791256 - | hypothetical protein TERM 2493 3791793 - 3791772 - R 100 -18.7 -5.10154 | opp_overlap 3791772 ACCGAAAACGAAAAA GGCCCCGGG TTTC CCCGGGGCC TTTCCGATCGTCTTC TERM 2494 3791772 - 3791793 + r 100 -18.7 -3.63782 | opp_overlap 3791772 ACCGAAAACGAAAAA GGCCCCGGG TTTC CCCGGGGCC TTTCCGATCGTCTTC Caul_3514 3792439 - 3791822 - | 30S ribosomal protein S4 Caul_3515 3793926 - 3793090 - | S-formylglutathione hydrolase Caul_3516 3794413 - 3793931 - | hypothetical protein Caul_3517 3795522 - 3794413 - | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase Caul_3518 3795696 - 3796106 + | hypothetical protein Caul_3519 3796110 - 3796325 + | XRE family transcriptional regulator Caul_3520 3797605 - 3796322 - | hypothetical protein TERM 2495 3796615 - 3796565 - G 73 -9.8 -3.9461 | gap 2, overlap 3796607 GTCGGTGAAGAAGAA CTGGCCGTCTTCCG-TCGCC-TCG TACAT CGACAGCGACCAGAAGCCGTCCAG CGGCATGTCGGCCGG Caul_3521 3798155 - 3797742 - | AtsE protein Caul_3522 3799022 - 3798222 - | tRNA/rRNA methyltransferase (SpoU) Caul_3523 3799130 - 3800146 + | Beta-lactamase TERM 2496 3800396 - 3800372 - g 72 -4.9 -4.39568 | overlap 3800373 3800374 AGCGACAGACCAAAA CGGCGAACC GCCCGAT GGTCCGCTG TCGCGGGTCGTGAAA TERM 2497 3800498 - 3800522 + G 71 -9.9 -3.77722 | overlap 3800482 3800491 CGATCAGGCGAAGCT CGCCGCGAGCG GTC TGATCGCGGTG TTCTTCGTCGTTACG Caul_3524 3800316 - 3800738 + | hypothetical protein Caul_3525 3800742 - 3801821 + | hypothetical protein Caul_3526 3804406 - 3801899 - | integral membrane sensor hybrid histidine kinase TERM 2498 3803792 - 3803822 + g 73 -7.4 -4.12188 | overlap 3803793 GAGGAGGGTCATCTC CTCGCCGCTGACGT CGA AGGTCGGCGGCGCC TTTTCGCGGTAGTAC Caul_3527 3804601 - 3805815 + | isocitrate dehydrogenase TERM 2499 3805841 - 3805877 + F 93 -17.4 -3.53343 | gap 1, opp_overlap 3805841, overlap 3805847 CTTTTTCGACGACAA CGC-GAACGCCTCTCCC GCCT GGGGGAGGCGTTTTGCG TTTCAGCGCAGCGTT TERM 2500 3805877 - 3805841 - f 76 -13 -3.40403 | gap 1, opp_overlap 3805841 3805847 CTTTTTCGACGACAA CGC-GAACGCCTCTCCC GCCT GGGGGAGGCGTTTTGCG TTTCAGCGCAGCGTT TERM 2501 3805847 - 3805870 + F 100 -16 -4.35524 | opp_overlap 3805841, overlap 3805841 CGACGACAACGCGAA CGCCTCTCCC GCCT GGGGGAGGCG TTTTGCGTTTCAGCG Caul_3528 3805988 - 3806566 + | hypothetical protein Caul_3529 3806672 - 3807655 + | auxin efflux carrier Caul_3530 3808421 - 3807606 - | ethanolamine ammonia-lyase Caul_3531 3809800 - 3808418 - | ethanolamine ammonia lyase large subunit TERM 2502 3809939 - 3809922 - R 77 -14.1 -3.30124 | overlap 3809904 TGTCATCCCGGACAA GCCCGGC GAAA GCCGGGC GAAGATCCGGGACCG Caul_3532 3810977 - 3810081 - | alpha/beta hydrolase fold TERM 2503 3811512 - 3811469 - g 73 -7.4 -4.1891 | gap 3, overlap 3811470 CGGCTTCAATACAAA TGGGGCGCC-GG-CCGC-TGG CCGCC CCGCGCGGACCAGGCGCCCAA CAACGGCCTGCTCTA Caul_3533 3811118 - 3811990 + | hypothetical protein Caul_3534 3812338 - 3813075 + | hypothetical protein Caul_3535 3813659 - 3813201 - | hypothetical protein Caul_3536 3814018 - 3813662 - | aspartate alpha-decarboxylase Caul_3537 3814231 - 3814935 + | hypothetical protein TERM 2504 3815064 - 3815042 - g 74 -12.6 -3.6106 | overlap 3815034 3815043 CCCAAGACCGCCAAA CCGCCGGCCG CGC CGGGCGGCGA GGTCAAGACCCCAGC Caul_3538 3814940 - 3815872 + | peptidase M23B Caul_3539 3816647 - 3815997 - | lysine exporter protein LysE/YggA Caul_3540 3818457 - 3816667 - | acyl-CoA synthetase Caul_3541 3819445 - 3818504 - | hypothetical protein Caul_3542 3820859 - 3819516 - | phospho-2-dehydro-3-deoxyheptonate aldolase Caul_3543 3822237 - 3820981 - | O-antigen polymerase TERM 2505 3821241 - 3821272 + g 82 -16.6 -3.39327 | GGGCCGCCCCGATCG CGCCCAGTTCCAGC CACA GCTGAAGCTGGGCG TTGTGGGTGTGCAGC TERM 2506 3822100 - 3822047 - G 84 -20.2 -2.83894 | ACCAGGATCAGCAGA GGCGGGGCGGCC-GCGCGGCTCAGCC TCAG GGCGG-GCAGCGCCAGCAGCCCCGCC AGGGCCATCAGCGGC Caul_3544 3823628 - 3822234 - | glutathione-disulfide reductase Caul_3545 3824381 - 3823701 - | ribose 5-phosphate isomerase Caul_3546 3825787 - 3824378 - | UDP-N-acetylglucosamine pyrophosphorylase Caul_3547 3825857 - 3826573 + | phosphoglycolate phosphatase Caul_3548 3826896 - 3832724 + | GAF sensor hybrid histidine kinase Caul_3549 3832726 - 3834834 + | multi-sensor hybrid histidine kinase TERM 2507 3834829 - 3834852 + T 79 -8.1 -4.38712 | overlap 3834830 GCGAAGCGGTTGGGA GGGTGAGGG CTTACA CCCTCACCG TTTTCTCGCGATGCC TERM 2508 3834830 - 3834851 + T 70 -11.6 -3.22906 | overlap 3834829 CGAAGCGGTTGGGAG GGTGAGGG CTTACA CCCTCACC GTTTTCTCGCGATGC Caul_3550 3835666 - 3834941 - | putative glutathione S-transferase Caul_3551 3835806 - 3836522 + | helix-turn-helix type 11 domain-containing protein Caul_3552 3837587 - 3836601 - | hypothetical protein Caul_3553 3838560 - 3837754 - | tRNA/rRNA methyltransferase (SpoU) Caul_3554 3839851 - 3838580 - | major facilitator transporter TERM 2509 3839938 - 3839958 + H 90 -2.4 -5.47218 | opp_overlap 3839926, overlap 3839937 CAAGCCAAGACCGTC GCCAAGAC AACCG GGCGTGGC TTTTTTTGAATCGGG Caul_3555 3840067 - 3841125 + | LacI family transcription regulator Caul_3556 3841817 - 3841320 - | PilT domain-containing protein Caul_3557 3842068 - 3841817 - | prevent-host-death family protein TERM 2510 3842952 - 3843005 + G 72 -14.3 -3.15861 | overlap 3842948 CTGGCGACTTTCGGC GGCGGCCCGGGCGTGGCCGTTCTCG CCAT CGGCGGCGGCCTGGCCTGGGTCGCG TTCGTGACGATCCTC Caul_3558 3842274 - 3843641 + | sodium/hydrogen exchanger Caul_3559 3843729 - 3844109 + | putative transposase of insertion sequence ISRm2011-2, orfA protein Caul_3560 3844171 - 3844674 + | transposase and inactivated derivatives-like protein TERM 2511 3844718 - 3844746 + T 100 -13.8 -5.24129 | overlap 3844719 TCGCTTCCCCGCGAA TGCCCCCGCTTC CCCTC GGAGCGGGGGCC TTTTTTATGCGGCGG TERM 2512 3844719 - 3844745 + T 100 -17.3 -3.73995 | overlap 3844718 CGCTTCCCCGCGAAT GCCCCCGCTTC CCCTC GGAGCGGGGGC CTTTTTTATGCGGCG Caul_3561 3846546 - 3844978 - | tryptophan halogenase Caul_3562 3846678 - 3847007 + | hypothetical protein Caul_3563 3848600 - 3847059 - | glucan biosynthesis protein G TERM 2513 3848829 - 3848793 - H 70 -7.2 -4.07568 | gap 1, opp_overlap 3848793 3848821 GCCGCGGGGCCAAAA GCCGAAGTGCGCGCTGG TGCG CCAACGCG-ACGCCGCC TATGTCTGACGGAAA Caul_3564 3848929 - 3850044 + | hypothetical protein Caul_3565 3850041 - 3850916 + | ABC transporter related TERM 2514 3851842 - 3851800 - g 75 -4.6 -4.64676 | overlap 3851801 CGAGGTGGAACAAAA CCCGCGCGCCTTGGTCAGCA AGC CGCCGGCCAAGGAACTGGAG GTCAAGCCGTGAGCA Caul_3566 3850916 - 3851854 + | hypothetical protein Caul_3567 3851851 - 3852504 + | hypothetical protein Caul_3568 3853030 - 3852470 - | uracil-DNA glycosylase superfamily protein Caul_3569 3853657 - 3853040 - | DNA-3-methyladenine glycosylase Caul_3570 3854514 - 3853750 - | NUDIX hydrolase TERM 2515 3854614 - 3854582 - R 76 -14 -3.19192 | GTTTACCCAAGCGAA GCGCTCCCCGCCGG TCATC CCGGAGAGGCGCGC AGCGCGCAGATCCGG Caul_3571 3855861 - 3854728 - | hypothetical protein Caul_3572 3856019 - 3857824 + | integral membrane sensor hybrid histidine kinase Caul_3573 3857902 - 3859071 + | L-carnitine dehydratase/bile acid-inducible protein F Caul_3574 3860105 - 3859233 - | hypothetical protein Caul_3575 3860303 - 3861025 + | TonB family protein TERM 2516 3861582 - 3861564 - T 70 -10.2 -3.57639 | opp_overlap 3861579, overlap 3861562 TAACACCTACAAACA CTCCGGAC GTC GTCCGGCG CTCCGCGACCCTTTC Caul_3576 3862955 - 3861792 - | acyl-CoA dehydrogenase domain-containing protein TERM 2517 3863033 - 3863013 - R 73 -8.9 -4.08216 | overlap 3863031 TCAGGTCCTCGAAAA GCGTCGCGC GTC GAGCAACGC GGCGTCCGGGCCTGG Caul_3577 3863987 - 3862998 - | FAD dependent oxidoreductase Caul_3578 3864168 - 3864590 + | XRE family transcriptional regulator TERM 2518 3864684 - 3864648 - T 78 -11.6 -3.72027 | opp_overlap 3864655, overlap 3864655 ACGTCCGACCAAGAA CGAAAAAGCCTGGCGC GCGAG GCTCCAGGCTTTTCAG TCTTCCAGCGATGGT TERM 2519 3864655 - 3864677 + T 85 -10.5 -4.28254 | opp_overlap 3864648 3864655 ACCAAGAACGAAAAA GCCTGGCGC GCGAG GCTCCAGGC TTTTCAGTCTTCCAG TERM 2520 3864677 - 3864655 - T 100 -10.5 -5.00339 | opp_overlap 3864655, overlap 3864648 ACCAAGAACGAAAAA GCCTGGCGC GCGAG GCTCCAGGC TTTTCAGTCTTCCAG TERM 2521 3864818 - 3864832 + T 76 -12.8 -3.53012 | opp_overlap 3864818 3864828 CGAGGACCGGATCAA GCGGCG AAA CGCCGC TTTCCACACGAAAAC TERM 2522 3864832 - 3864818 - T 73 -12.8 -3.17212 | opp_overlap 3864818, overlap 3864828 CGAGGACCGGATCAA GCGGCG AAA CGCCGC TTTCCACACGAAAAC TERM 2523 3864843 - 3864877 + T 90 -15.7 -3.73402 | opp_overlap 3864828 3864847, overlap 3864847 GCCGCTTTCCACACG AAAACGCCCCGGAGC GTCGA GCTCCGGGGCGTTCG TTTCCTGGCCCGTCT TERM 2524 3864873 - 3864847 - T 100 -20.9 -4.34402 | opp_overlap 3864843 3864847, overlap 3864828 CTTTCCACACGAAAA CGCCCCGGAGC GTCGA GCTCCGGGGCG TTCGTTTCCTGGCCC TERM 2525 3864847 - 3864873 + T 100 -20.9 -3.56704 | opp_overlap 3864828 3864847, overlap 3864843 CTTTCCACACGAAAA CGCCCCGGAGC GTCGA GCTCCGGGGCG TTCGTTTCCTGGCCC Caul_3579 3865638 - 3864901 - | TonB family protein Caul_3580 3866082 - 3865648 - | biopolymer transport protein ExbD/TolR Caul_3581 3866987 - 3866088 - | MotA/TolQ/ExbB proton channel Caul_3582 3868299 - 3868117 - | hypothetical protein Caul_3583 3869336 - 3868296 - | hypothetical protein Caul_3584 3869938 - 3869333 - | maf protein Caul_3585 3870166 - 3869948 - | translation initiation factor IF-1 Caul_3586 3870718 - 3870263 - | protein tyrosine phosphatase Caul_3587 3871213 - 3870722 - | hypothetical protein Caul_3588 3872572 - 3871232 - | histidinol dehydrogenase TERM 2526 3872604 - 3872584 - H 100 -12.5 -4.57569 | opp_overlap 3872586, overlap 3872585 CCATCGGCTCAAAAA GCCTCCCCC CGT GGGGGAGGT GGTCGCGCAGCGACC TERM 2527 3872603 - 3872585 - H 88 -16 -3.3422 | opp_overlap 3872586, overlap 3872584 CATCGGCTCAAAAAG CCTCCCCC CGT GGGGGAGG TGGTCGCGCAGCGAC TERM 2528 3872698 - 3872718 + H 76 -12.5 -3.53012 | overlap 3872699 GTCGGCTCCGCCGAC ACCTCCCCC ACA GGGGGAGGC TTTACGCACACGCAG TERM 2529 3872699 - 3872717 + H 81 -16 -2.71712 | overlap 3872698 TCGGCTCCGCCGACA CCTCCCCC ACA GGGGGAGG CTTTACGCACACGCA Caul_3589 3873842 - 3874522 + | hypothetical protein Caul_3590 3876043 - 3874571 - | NCS1 nucleoside transporter Caul_3591 3876472 - 3876278 - | hypothetical protein TERM 2530 3876438 - 3876428 - G 75 -4.6 -4.57569 | overlap 3876430 GCACTTGCGGAAAAA CACG GGA CGCG CACGCACACGGGTCG TERM 2531 3876550 - 3876538 - R 74 -5.5 -4.4261 | opp_overlap 3876539, overlap 3876539 CGGTTAACACGAAAA CTCGC CTA ACGAG CGACTTTCCTCGCAT Caul_3592 3878598 - 3876652 - | peptidase M1 membrane alanine aminopeptidase TERM 2532 3878763 - 3878785 + r 80 -14.8 -3.13164 | CGATCGCTTCGCGAT CACCTCCCCC ACA GGGGGAGGCG TTGGCTGGTTCACAG Caul_3593 3879910 - 3878795 - | hypothetical protein TERM 2533 3878903 - 3878935 + g 72 -13.4 -3.19463 | gap 1 GACCATCTTGTCGTA GAGCGCCGGG-GTCC AGCC GGCCGCCTGGCGCTC TTCGTCGCTCATCGC TERM 2534 3879978 - 3879952 - R 83 -16.6 -2.82933 | opp_overlap 3879944 3879945, overlap 3879969 CGTTAAGGTATCAGA CCGCGAGGCGTT TGA AACGCTTCGCGG TCAAGGCGTTGGTTG Caul_3594 3880327 - 3880016 - | ethyl tert-butyl ether degradation EthD Caul_3595 3881025 - 3880423 - | hypothetical protein TERM 2535 3881223 - 3881240 + r 77 -14.1 -3.30124 | overlap 3881205 3881204 CGGTCCCGGATCTGC GCCCGGC TTTC GCCGGGC TTGTCCGGGATGACA Caul_3596 3881755 - 3881303 - | dehydratase Caul_3597 3882325 - 3881864 - | MarR family transcriptional regulator Caul_3598 3882485 - 3883045 + | hypothetical protein TERM 2536 3883074 - 3883102 + T 83 -5.2 -4.99035 | opp_overlap 3883074 3883075 3883091, overlap 3883091 CGCCTGAGACGAAAA CCTCGTCCTTCG ACAAG CTCAGGATGAGG TTTTTCTATCGCTCG Caul_3599 3884085 - 3883225 - | integrase catalytic region TERM 2537 3884092 - 3884114 + r 91 -3.3 -5.45726 | gap 1 GAACTTCATCGGGAG GCCGCTC-CG AAGA TGAGCGCGGC TTTTTTTAGGATGTC Caul_3600 3884396 - 3884082 - | transposase IS3/IS911 family protein TERM 2538 3884245 - 3884193 - G 100 -25.6 -2.8547 | gap 1, opp_overlap 3884195 3884219 AGCGGCCAGATCAGA CGGCGACGGGGCCGGCGCTTGCG TGTGGGGG CGCC-GCGCCGGCCCCGTCGCCC GCGTCCCGTATTGGA Caul_3601 3884932 - 3884495 - | hypothetical protein Caul_3602 3886223 - 3884925 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 2539 3884972 - 3884994 + g 83 -9 -4.63218 | overlap 3884973 CCTTGATCCGGCGCA CCTGGGCTCC GCA GGCGCCCAGC TTTTCTTCCAACCGC TERM 2540 3884973 - 3884993 + g 70 -12.5 -3.3761 | overlap 3884972 CTTGATCCGGCGCAC CTGGGCTCC GCA GGCGCCCAG CTTTTCTTCCAACCG Caul_3603 3886513 - 3886358 - | hypothetical protein TERM 2541 3886462 - 3886480 + g 81 -3.7 -4.93365 | overlap 3886446 GCAGCGCCTGGGCCA GCCTGGC TTCGC GCTCGGC TTTTTCGTTATAGGG Caul_3604 3887015 - 3887440 + | GreA/GreB family elongation factor Caul_3605 3889770 - 3887437 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Caul_3606 3890231 - 3889767 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Caul_3607 3891528 - 3890239 - | gluconate 2-dehydrogenase (acceptor) Caul_3608 3892942 - 3891800 - | L-lactate dehydrogenase TERM 2542 3893160 - 3893134 - H 74 -14.4 -2.53015 | opp_overlap 3893124 AGACTCCGGAAGGCA GGCCTGGCCATC GGG GTTGGCCAAGCC CGGCGGATGGTCTTT Caul_3609 3893237 - 3894100 + | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase Caul_3610 3894479 - 3894135 - | hypothetical protein Caul_3611 3894635 - 3896641 + | hypothetical protein TERM 2543 3896687 - 3896655 - T 73 -12.8 -3.21218 | gap 1, opp_overlap 3896644 AGCGGGGATCAGGAA TCG-GGGGACATGCC CACG GGCATGTCCCCACCA TCGCCGAGCCCTAGT Caul_3612 3898263 - 3896698 - | Alpha-N-arabinofuranosidase Caul_3613 3900253 - 3898451 - | dihydroxy-acid dehydratase Caul_3614 3901313 - 3900561 - | GntR domain-containing protein Caul_3615 3901638 - 3902648 + | hypothetical protein TERM 2544 3903566 - 3903589 + G 77 -15.2 -3.16564 | GACGCCTTCCTGCTG GGCCGGCGCG TCGC CGCCCCGGCC TTCATCGAATAGAGC Caul_3616 3902645 - 3903601 + | galactose 1-dehydrogenase TERM 2545 3904213 - 3904186 - g 74 -13.4 -3.35679 | gap 1, opp_overlap 3904198 CGGCGCGATCGACAA GGCGGTCAAGGCC GCC GGCC-TGCCCGCC GGGGTCTTCGCCATC TERM 2546 3904393 - 3904447 + G 72 -14 -3.16881 | opp_overlap 3904390 3904391 GAGCAGCATCAACCC GGTGGTCCTCATGCCCGCCGCCCTGG CCG CCCGGGCCGAGGCCCTGGGGACGGCC TTCGTCGGCTCGCTG Caul_3617 3903614 - 3905152 + | aldehyde dehydrogenase TERM 2547 3905184 - 3905216 + F 100 -22.8 -4.15044 | GAGCTCGACTTGAGC CGCGCCGTTCCGGA CCTGC TCCGGGACGGCGCG TTTCTTCCGGCCGGG TERM 2548 3905707 - 3905697 - g 70 -8.2 -3.9461 | overlap 3905694 3905698 GGCGCTGAACAACAA CGGC GTC GCCG CCCTGCACGGCGGGG Caul_3618 3905317 - 3906471 + | aldose 1-epimerase Caul_3619 3906654 - 3907892 + | acetyl-CoA acetyltransferase TERM 2549 3907948 - 3907911 - T 76 -11.1 -3.72576 | opp_overlap 3907913, overlap 3907912 CGCGCCTCGACCAAA GTCCGGGCGTTCGCGTC ACCC GCCGCGAATGCCCGGTT TCGGCTTGGCGATGG TERM 2550 3907947 - 3907912 - T 77 -14.6 -2.83403 | opp_overlap 3907913, overlap 3907911 GCGCCTCGACCAAAG TCCGGGCGTTCGCGTC ACCC GCCGCGAATGCCCGGT TTCGGCTTGGCGATG TERM 2551 3907913 - 3907946 + T 100 -20.3 -3.66356 | opp_overlap 3907912 3907911 CGCCTCGACCAAAGT CCGGGCGTTCGCGTC ACCC GCCGCGAATGCCCGG TTTCGGCTTGGCGAT Caul_3620 3909428 - 3908007 - | amidase TERM 2552 3908769 - 3908748 - G 79 -11.5 -4.02733 | CAAAATAGAGAACAA CAGCGCCAG GTCT CGGGCGCTG CGCGCCATTGGGCCG TERM 2553 3909509 - 3909495 - R 75 -3.5 -4.83169 | gap 1, overlap 3909496 AGCGCCCTATAAAAA GGTCCG CCAC CGG-CC GGCTACTCAGGATTT Caul_3621 3909686 - 3909516 - | hypothetical protein Caul_3622 3910163 - 3912409 + | Beta-glucosidase TERM 2554 3912493 - 3912476 - T 77 -14.1 -3.30124 | overlap 3912456 TGTCATCCCGGACAA GCCCGGC GAAA GCCGGGC GCAGATTCGGGACCG TERM 2555 3912526 - 3912576 + T 74 -5.3 -4.62471 | overlap 3912499 3912527 GGAAGCGCTGAGTTC ACGC-GTCGGTCCCGGATCTTCGCG CTG CGCGCTCGTCCGGGA-TGACAGCGA TTTTTGAACGTTGGG Caul_3623 3913645 - 3912593 - | LacI family transcription regulator TERM 2556 3915292 - 3915267 - g 73 -12.5 -3.40403 | gap 1, overlap 3915268 GGTCTCGTACCAGAA CCTGCCGGCGGC GCT GCTGCCGGC-GG AACTGCAGGACGCCA Caul_3624 3913780 - 3915357 + | aldehyde dehydrogenase TERM 2557 3915399 - 3915374 - T 95 -15.5 -4.09685 | gap 1, overlap 3915377 CGCCAGCCCTCAAAA GAC-CCTCCCCC TGT GGGGGAGGTGTC GCCCGAAGGGCGACG TERM 2558 3915395 - 3915377 - T 81 -16 -2.78508 | overlap 3915374 CAGCCCTCAAAAGAC CCTCCCCC TGT GGGGGAGG TGTCGCCCGAAGGGC Caul_3625 3919204 - 3915515 - | 5-oxoprolinase (ATP-hydrolyzing) TERM 2559 3919292 - 3919241 - R 77 -12.8 -3.57144 | gap 1, opp_overlap 3919225 CGGGTGAGGTGGAAA CCGCACCGACCTTCTCCTCCCCCGT GCA ACGGGGGAGGTGGCGG-CGAAGCCG ACGGAGGGGGCGTCC Caul_3626 3919871 - 3919314 - | hypothetical protein TERM 2560 3920223 - 3920167 - R 76 -13.5 -3.20723 | opp_overlap 3920174 CCCGGACGAAGCGAA GCGTAGATCCGGGACCGCCGGATGCGC TGA GCTCAGGGGTCGGTCCCGGATATTCGC GCTACGCGCTCGTCC Caul_3627 3921003 - 3920263 - | hypothetical protein TERM 2561 3920761 - 3920788 + g 74 -16.3 -2.71731 | gap 1 CTCCCAGACGCCGTC GGCGTGCCGGGC CAGCA GCCCGGC-CGCC TGGTTCAGCCATGAA Caul_3628 3922101 - 3921094 - | 2-nitropropane dioxygenase NPD TERM 2562 3921667 - 3921610 - G 80 -16.2 -3.14468 | gap 2, opp_overlap 3921636 3921637 3921660, overlap 3921605 CTGGATCAGAGCGAA CGGCGACAGGGTGCCCGCGTGGCCGCCG GCCC CGGCGGCCAC-CGGG-ATCAGGCCGTCG GCGCCCTTCTCGATG TERM 2563 3922250 - 3922236 - H 81 -4.2 -5.093 | overlap 3922238 GCCAAAACAAGAAAA TGCTGC AGT GCAGGA GAGAGACGTCGTGAC TERM 2564 3923234 - 3923184 - g 72 -13.2 -3.14564 | gap 2, opp_overlap 3923199 3923214 CGACGCCTGGACCAA CCTGCTGCGCCTGACCAGCGCCGG GTTCG CCGGCGC-GGTC-GGCGGGGCCGA CGCCGTCGTATTGGG TERM 2565 3923199 - 3923239 + G 70 -14.5 -2.73994 | opp_overlap 3923184, overlap 3923214 CCTGCTGCGCCTGAC CAGCGCCGGGTTCGCCGGC GCG GTCGGCGGGGCCGACGCCG TCGTATTGGGCGCCT Caul_3629 3922261 - 3923730 + | methylmalonyl-CoA mutase Caul_3630 3923727 - 3925880 + | methylmalonyl-CoA mutase TERM 2566 3925881 - 3925920 + F 74 -11.6 -3.53012 | opp_overlap 3925912 3925915, overlap 3925866 3925884 GGCGAGGCGGCGTAG GGCTCGTCATTGTAATTC AAAT GAATTACAATGACGCCTC TTTCCGAGGAGGCGA TERM 2567 3925884 - 3925917 + F 71 -14.1 -2.60496 | opp_overlap 3925912 3925915, overlap 3925866 3925881 GAGGCGGCGTAGGGC TCGTCATTGTAATTC AAAT GAATTACAATGACGC CTCTTTCCGAGGAGG Caul_3631 3925938 - 3926240 + | addiction module antitoxin Caul_3632 3926243 - 3926533 + | addiction module antitoxin Caul_3633 3926646 - 3927113 + | hypothetical protein Caul_3634 3927599 - 3927135 - | hypothetical protein Caul_3635 3928096 - 3927635 - | hypothetical protein Caul_3636 3928306 - 3928623 + | hypothetical protein TERM 2568 3928718 - 3928685 - T 100 -22.5 -4.15044 | overlap 3928686 GCGGGGTCGAATAAA TCCGCTCATCCCGGC GAAT GCCGGGATGAGCGGC TCAACTATCAGGCGC TERM 2569 3928717 - 3928686 - T 100 -26 -3.08812 | overlap 3928685 CGGGGTCGAATAAAT CCGCTCATCCCGGC GAAT GCCGGGATGAGCGG CTCAACTATCAGGCG Caul_3637 3929430 - 3928726 - | hypothetical protein TERM 2570 3929448 - 3929476 + r 75 -4 -4.74103 | gap 2, opp_overlap 3929449 CGCGGGCTCCAACAA CCGT-TT-TGTTGC AAC GCAGCATAACACGG TTTTTGACTTCGCGA Caul_3638 3930809 - 3929514 - | chromate transporter Caul_3639 3931639 - 3930806 - | hypothetical protein TERM 2571 3932315 - 3932291 - g 75 -4.9 -4.58663 | opp_overlap 3932311 ACCACCCTGCAAAAA CGCCACTTG AAGCTGG CCAGCGGCG GGGCGGTGTTCGAGT Caul_3640 3931784 - 3932794 + | DNA topoisomerase, type I, putative Caul_3641 3933034 - 3933633 + | hypothetical protein Caul_3642 3933633 - 3933881 + | XRE family transcriptional regulator Caul_3643 3933906 - 3934760 + | alpha/beta hydrolase fold Caul_3644 3935737 - 3934757 - | hypothetical protein TERM 2572 3935728 - 3935755 + g 71 -2.7 -4.56597 | gap 1, overlap 3935731 ATCGGGTCGCCTTGT CGTGTCGCATGG CGCAC CTATACGAC-CG TTTTTGACGCAGAGC Caul_3645 3935833 - 3936177 + | hypothetical protein Caul_3646 3936524 - 3937345 + | flagellin domain-containing protein TERM 2573 3937371 - 3937392 + T 100 -17.3 -4.66537 | opp_overlap 3937371 GAGTAGCGTAAGAGA GGGCGGGTC TTCG GACCCGCCC TTTTCTATTGAACGC TERM 2574 3937392 - 3937371 - T 88 -17.3 -3.09289 | opp_overlap 3937371 GAGTAGCGTAAGAGA GGGCGGGTC TTCG GACCCGCCC TTTTCTATTGAACGC Caul_3647 3937959 - 3937411 - | GCN5-related N-acetyltransferase TERM 2575 3938142 - 3938171 + r 100 -14.3 -4.65263 | overlap 3938162 CTCCTATGCGACTTT GGCCGTCTTCTTC TCCT GTAGAAGGCGGCC TTTCTTTTGCGCGCT Caul_3648 3938385 - 3938185 - | hypothetical protein Caul_3649 3938562 - 3938990 + | hypothetical protein TERM 2576 3939116 - 3939068 - T 86 -11.8 -4.20368 | opp_overlap 3939079, overlap 3939070 CGATGCGAAGACAAA GACCTGGAGCAAGCCGTGCGA-GT CCT ACATCGCGCGACCTGCTCTAGG-C GGTGACGATCCGCCC TERM 2577 3939115 - 3939070 - T 90 -15.5 -3.69842 | gap 1, opp_overlap 3939079, overlap 3939068 ATGCGAAGACAAAGA CCTGGAGCAAGCCGTGCGA-GT CCT ACATCGCGCGACCTGCTCTAGG CGGTGACGATCCGCC Caul_3650 3939503 - 3939111 - | Rieske (2Fe-2S) domain-containing protein Caul_3651 3940510 - 3939503 - | fumarylacetoacetate (FAA) hydrolase Caul_3652 3941841 - 3940558 - | homogentisate 1,2-dioxygenase TERM 2578 3941959 - 3941903 - R 91 -18.5 -3.23274 | opp_overlap 3941938 3941956 TCCCGGACAAGCGAA GCGAAGATCCGGGACCGCCGGAAGCGC GGC GCTCAGGCGTCGGTCCCGGATCCGCGC GCTCCGCGCTTGTCC TERM 2579 3941938 - 3941985 + r 71 -9 -3.73775 | gap 1, opp_overlap 3941903, overlap 3941956 GAAGCGCGGCGCTCA GGCGTCGGTCCCGGATCCGCGCG CTC CGCGCTTGTCCGGGAT-GACAAC TTTGATCGGCCTAGG Caul_3653 3943057 - 3941996 - | 4-hydroxyphenylpyruvate dioxygenase Caul_3654 3944353 - 3943232 - | aminotransferase class I and II TERM 2580 3944583 - 3944569 - R 71 -12.8 -3.02511 | CCTAGGGGGCGAACA GGCGGC GAA GCCGCC AGGTGGGCAAGTGGG Caul_3655 3945080 - 3944610 - | AsnC family transcriptional regulator Caul_3656 3945237 - 3945539 + | putative lipoprotein TERM 2581 3945749 - 3945714 - T 86 -15.4 -3.62572 | opp_overlap 3945715 3945720, overlap 3945715 3945720 GACGATCACCGCAAA GCAAAACCCCCGGCGC TCTC GCTCCGGGGGTTTCGT TTACGCTTACTGGTA TERM 2582 3945748 - 3945715 - T 87 -18.9 -2.77222 | opp_overlap 3945715 3945720, overlap 3945714 3945720 ACGATCACCGCAAAG CAAAACCCCCGGCGC TCTC GCTCCGGGGGTTTCG TTTACGCTTACTGGT TERM 2583 3945715 - 3945748 + T 93 -16.7 -3.68244 | opp_overlap 3945715 3945714 3945720, overlap 3945720 ACGATCACCGCAAAG CAAAACCCCCGGCGC TCTC GCTCCGGGGGTTTCG TTTACGCTTACTGGT TERM 2584 3945720 - 3945743 + T 95 -15.2 -4.08317 | opp_overlap 3945720 3945715 3945714, overlap 3945715 CACCGCAAAGCAAAA CCCCCGGCGC TCTC GCTCCGGGGG TTTCGTTTACGCTTA TERM 2585 3945743 - 3945720 - T 100 -15.2 -4.55798 | opp_overlap 3945715 3945720, overlap 3945715 3945714 CACCGCAAAGCAAAA CCCCCGGCGC TCTC GCTCCGGGGG TTTCGTTTACGCTTA Caul_3657 3947302 - 3945788 - | cell division protein FtsZ TERM 2586 3946075 - 3946129 + g 82 -13.5 -3.71848 | gap 1 GGGCCGGCGCGGCTT CCATCACCGGCTCTTCGAAGCGCAGG TCTT CCTGGGCTTCGACGA-CCGGGGCGGG TTCTTCATAGACCGG TERM 2587 3947489 - 3947466 - R 81 -2.4 -5.14965 | overlap 3947479 3947486 AGGGTCAGGAAAAAA CCAGTTATCC AAAG GAATCACTAG GGATTCCTTGGACTC TERM 2588 3947749 - 3947707 - R 88 -6.3 -5.24129 | overlap 3947708 3947710 3947712 TGCGTTCACAAAAAA TTACAGTCACGCGCCA-GAGC CAC GCGCATGGCGCGCGACT-CAG CCAAGCTTCGGCGCG TERM 2589 3947748 - 3947708 - R 74 -9.8 -3.73995 | overlap 3947707 3947710 3947712 GCGTTCACAAAAAAT TACAGTCACGCGCCA-GAGC CAC GCGCATGGCGCGCGACT-CA GCCAAGCTTCGGCGC TERM 2590 3947747 - 3947710 - R 76 -12.7 -3.44801 | gap 1, overlap 3947708 3947707 3947712 GTTCACAAAAAATTA CAGTCACGCGCCA-GAGC CAC GCGCATGGCGCGCGACTC AGCCAAGCTTCGGCG TERM 2591 3947745 - 3947712 - R 84 -15.3 -3.28457 | gap 1, overlap 3947710 3947708 3947707 TCACAAAAAATTACA GTCACGCGCCA-GAGC CAC GCGCATGGCGCGCGAC TCAGCCAAGCTTCGG Caul_3658 3949102 - 3947777 - | cell division protein FtsA Caul_3659 3950045 - 3949134 - | cell division protein FtsQ Caul_3660 3950982 - 3950014 - | D-alanine--D-alanine ligase TERM 2592 3951055 - 3951091 + r 100 -27.5 -3.55444 | opp_overlap 3951055 GCAGGCCTGCCAATA CTCTGCTCATCCCGGCG AAT TGCCGGGATGAGCAGAG TTTAGGAGGTCAAGA TERM 2593 3951091 - 3951055 - R 100 -26.8 -3.02144 | opp_overlap 3951055 GCAGGCCTGCCAATA CTCTGCTCATCCCGGC GAATT GCCGGGATGAGCAGAG TTTAGGAGGTCAAGA Caul_3661 3952513 - 3951107 - | peptidase M28 Caul_3662 3953637 - 3952714 - | UDP-N-acetylenolpyruvoylglucosamine reductase Caul_3663 3955231 - 3953813 - | UDP-N-acetylmuramate--L-alanine ligase TERM 2594 3954324 - 3954359 + g 82 -15.4 -3.40403 | gap 1 TCGACGCCCAGCTCG CGGGC-CACCGCCACGG CGG CCGTGGCGTTGAGCACG TTGTGGTGCCCGGCC Caul_3664 3955351 - 3955893 + | hypothetical protein TERM 2595 3955943 - 3955896 - T 100 -20.6 -3.55444 | gap 1, opp_overlap 3955897 3955903, overlap 3955897 CGCCGAGCCCTGAAA GCCGGA-ACGGCGGCGGCGCGTC CAG AACGCGCCGCCGCCGTCTCTAGT TTAGGCTTGGAAGAG TERM 2596 3955897 - 3955942 + T 100 -23.4 -3.66178 | gap 1, opp_overlap 3955896 3955897, overlap 3955903 GCCGAGCCCTGAAAG CCGGA-ACGGCGGCGGCGCGT CCAGA ACGCGCCGCCGCCGTCTCTAG TTTAGGCTTGGAAGA TERM 2597 3955942 - 3955897 - T 100 -24.1 -2.73124 | gap 1, opp_overlap 3955897 3955903, overlap 3955896 GCCGAGCCCTGAAAG CCGGA-ACGGCGGCGGCGCGTC CAG AACGCGCCGCCGCCGTCTCTAG TTTAGGCTTGGAAGA TERM 2598 3955903 - 3955935 + T 100 -27.8 -3.06037 | opp_overlap 3955897 3955896, overlap 3955897 CCCTGAAAGCCGGAA CGGCGGCGGCGCGT CCAGA ACGCGCCGCCGCCG TCTCTAGTTTAGGCT Caul_3665 3959102 - 3955944 - | endonuclease/exonuclease/phosphatase TERM 2599 3956273 - 3956223 - G 72 -13.6 -3.21416 | opp_overlap 3956221 3956247 3956250 GACCCCGATGACGAA CGTGTCGTCGCCGGCCCCGCCCTG CAT CCGGTCGTGGCCGCCGCCGCCGCG AATGATGTCGTTGCC TERM 2600 3959247 - 3959280 + r 71 -13.8 -2.53213 | gap 1, overlap 3959246 3959235 3959277 CGTTCTGGCGATCGA GGCGGCGCCCGCCGC CCTGA GTTGCGG-CGCCGCC TGGGTTCCGGCGTTG Caul_3666 3960389 - 3959304 - | N-acetylglucosaminyl transferase Caul_3667 3961621 - 3960449 - | cell division protein FtsW Caul_3668 3963653 - 3961692 - | PAS/PAC sensor hybrid histidine kinase TERM 2601 3962386 - 3962350 - G 71 -10.8 -3.67611 | opp_overlap 3962350 3962351 GCCAGCCGAACATAA TCGCC-CGGCGGCAGGCC GCT GGCG-GACGCCGCGGCGA CGGTTTCGTTGGAGG TERM 2602 3963670 - 3963660 - R 72 -2.4 -4.75372 | ATCATCCATCAAAAA GCCC CCC GGCC AAACTCAACGCAACG Caul_3669 3965158 - 3963749 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Caul_3670 3966287 - 3965172 - | phospho-N-acetylmuramoyl-pentapeptide-transferase Caul_3671 3967705 - 3966287 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Caul_3672 3969155 - 3967698 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Caul_3673 3970906 - 3969152 - | peptidoglycan glycosyltransferase Caul_3674 3971349 - 3970903 - | hypothetical protein Caul_3675 3972314 - 3971346 - | S-adenosyl-methyltransferase MraW TERM 2603 3971972 - 3971961 - G 70 -3.6 -4.45544 | GCGCATGAAGGAAAA GCCG CGCT CAGC CTCGTCGAGCTGCAT Caul_3676 3972820 - 3972311 - | hypothetical protein Caul_3677 3973630 - 3973875 + | prevent-host-death family protein Caul_3678 3973973 - 3974257 + | hypothetical protein Caul_3679 3974853 - 3974254 - | FMN-binding negative transcriptional regulator TERM 2604 3974643 - 3974605 - G 75 -16.7 -2.87132 | gap 1 GTCGGGGCTGACATA GGCGTCCGGGCCGGTGGC CAGG GCCAC-GGCGCGGAAGCC CTGGACGACGTGCGG Caul_3680 3975584 - 3974853 - | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Caul_3681 3976474 - 3975581 - | hypothetical protein TERM 2605 3976382 - 3976353 - G 78 -14.3 -3.58343 | gap 1, overlap 3976370 3976372 GCGACGATGGCGAAA CGCACCGCCGC-GT AGA ACAGCGGCGGCACG CCCCAGTGGGCGACC TERM 2606 3976550 - 3976519 - H 95 -10.8 -4.4078 | TGTTTGCAATGAAAA GCCGGGGACATGCA CTCG TGCGTGTCCCCCAC TGAAGCTCAGCACGT Caul_3682 3976714 - 3978195 + | FAD dependent oxidoreductase Caul_3683 3979056 - 3978400 - | hypothetical protein Caul_3684 3979868 - 3979059 - | enoyl-CoA hydratase TERM 2607 3980238 - 3980268 + G 72 -14.8 -2.91695 | opp_overlap 3980237, overlap 3980235 3980243 TCATCGCGATGGAAG TCGAAGCTCTGCTC GGC GAGCAAGGCTTCGA TAGTTTCGACATCGC Caul_3685 3980141 - 3980539 + | response regulator receiver protein Caul_3686 3980594 - 3981205 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 2608 3981269 - 3981243 - T 100 -18.7 -4.32177 | GGAGCCGATAAGAAA CGGCCCCGCCC GATTG GGGCGAGGCCG CTTGAAACACATTCA Caul_3687 3981732 - 3981304 - | TraR/DksA family transcriptional regulator Caul_3688 3982337 - 3981909 - | flagellar assembly regulator FliX Caul_3689 3982570 - 3983685 + | flagellar basal body P-ring protein Caul_3690 3983685 - 3984002 + | chemotactic signal-response protein CheL Caul_3691 3984006 - 3984452 + | flagellar basal-body protein FlbY TERM 2609 3984461 - 3984478 + F 76 -9.1 -4.08216 | GGCTTAGGGGCGGCA GCCACCG GACA TGGTGGC TTTTCGCGGGCCTCA Caul_3692 3984665 - 3985873 + | acyltransferase 3 TERM 2610 3986488 - 3986518 + G 86 -19 -3.23216 | GACCCGGCGCGTGGC CCTGGTCAGCGTCG GGG CGGCGCTGGCCGGG TTGCTGCTGATGGCC Caul_3693 3986099 - 3987907 + | integral membrane sensor hybrid histidine kinase Caul_3694 3988018 - 3988692 + | hypothetical protein Caul_3695 3988952 - 3988770 - | hypothetical protein Caul_3696 3989121 - 3989603 + | hypothetical protein Caul_3697 3989747 - 3992656 + | excinuclease ABC subunit A TERM 2611 3992692 - 3992728 + T 83 -11.6 -4.07568 | opp_overlap 3992713, overlap 3992690 TTGACGCGCCTTGCG TGGTCCTCGTCCTTCG ACAAG CTCAGGATGAGGACCA TTTTGCGGCCCGGAC TERM 2612 3992747 - 3992787 + T 77 -12.6 -3.65812 | opp_overlap 3992752, overlap 3992737 3992752 3992774 TGCGGCCCGGACATT CGAAACCCTCATCCTGAG CGTGT CGAAGGACGAGGGTTTCG TTCTGTTCCGGCGAG Caul_3698 3993745 - 3992825 - | hypothetical protein Caul_3699 3993916 - 3994530 + | glutathione S-transferase domain-containing protein Caul_3700 3995474 - 3994605 - | hypothetical protein Caul_3701 3996271 - 3995471 - | hypothetical protein TERM 2613 3996641 - 3996626 - g 71 -2.4 -4.64676 | overlap 3996628 GTAGGGCCAACAAAA GTGCGC ACCG ACGCCC ATCAGACCGACGGCC TERM 2614 3996803 - 3996820 + G 70 -12.7 -3.28924 | GCCGGCGGCGCCCTG GCCGTCG ACCG CGACGGC TTCTCGGCCGAGGTC Caul_3702 3996464 - 3997906 + | tRNA (uracil-5-)-methyltransferase Gid Caul_3703 3998037 - 3999158 + | MscS mechanosensitive ion channel Caul_3704 3999985 - 3999119 - | hypothetical protein TERM 2615 4000038 - 4000048 + H 73 -8.2 -4.06687 | overlap 4000024 GGCGGACCCGGCCCT GGCG TTC CGCC TTGTTTATAAAGGGT Caul_3705 4000253 - 4001554 + | allantoate amidohydrolase Caul_3706 4001577 - 4002887 + | Serine--pyruvate transaminase Caul_3707 4003018 - 4003935 + | urate catabolism protein TERM 2616 4004013 - 4004032 + F 71 -9.2 -3.75629 | TCGCAGGTGCGGAGG TGTGGCGC GCTG GCGCCCCA TTTCGCTTCACCGTC Caul_3708 4004126 - 4004647 + | hypothetical protein Caul_3709 4004649 - 4005833 + | hypothetical protein Caul_3710 4005830 - 4006510 + | TetR family transcriptional regulator Caul_3711 4007604 - 4006657 - | acetamidase/formamidase TERM 2617 4006867 - 4006915 + g 74 -14.4 -3.28712 | gap 1, opp_overlap 4006864 CAGGGTCAGATAGTG GGTCGGCGTC-TCGGCGCTGGGC CAGC GCCGTGCGCCGACGTCGGCGGCC TTGTGCAGCACGAAG Caul_3712 4007838 - 4008053 + | hypothetical protein TERM 2618 4008791 - 4008844 + G 70 -15.1 -2.70932 | gap 1, overlap 4008830 GCCGCGCCGGCCAGC CCCGGCCTGCAAGCCGGCGCCGACGG CCC CCTTC-GCGTCGGCGTGCTGGGCGGC TGGTTCGCGCAGGGC Caul_3713 4008050 - 4009459 + | amidase Caul_3714 4009456 - 4009857 + | hypothetical protein TERM 2619 4010486 - 4010465 - g 78 -10.1 -4.18018 | opp_overlap 4010464 CGTGGTCATGGAAAA CGTGGTGCT CAAG AGCACCCCG ATCTTCGACGTCCAG TERM 2620 4010771 - 4010757 - g 81 -7 -4.62471 | overlap 4010759 TTCAATGGCGAAAAA GACGCC TTG GGCGGC TATGACGAATACGCC TERM 2621 4010769 - 4010759 - g 70 -8.2 -3.92577 | overlap 4010757 CAATGGCGAAAAAGA CGCC TTG GGCG GCTATGACGAATACG TERM 2622 4011216 - 4011175 - g 74 -10.7 -3.7829 | overlap 4011176 AGTACACGCAGGAAA TCCGCCTCGCCAGCGACGA CGCT TCGCCGCTGACCTGGCAGG TGGGCGCCTACTACT Caul_3715 4010073 - 4012268 + | TonB-dependent receptor TERM 2623 4012321 - 4012358 + F 81 -14.1 -3.56643 | overlap 4012325 AAGGATTGCCATCGT CCCGCCATGCTCCCGGT TCGC GCCGGGAGCATGGTTCG TTTGAGGGGTCTCCC TERM 2624 4012325 - 4012354 + F 100 -20.1 -3.51708 | overlap 4012321 ATTGCCATCGTCCCG CCATGCTCCCGGT TCGC GCCGGGAGCATGG TTCGTTTGAGGGGTC Caul_3716 4012405 - 4013364 + | inosine/uridine-preferring nucleoside hydrolase TERM 2625 4013440 - 4013390 - T 100 -24.9 -3.32844 | opp_overlap 4013389 GTCGCTACGCGACAA CTCCCCCAGAGAGGGAGCATTTG GTGCG CAGATCCTCCCCCTCTGGGGGAG GTGGCCCGAACGGTC Caul_3717 4014755 - 4013466 - | guanine deaminase TERM 2626 4013937 - 4013898 - G 73 -12.1 -3.48924 | CGAGGTCGGACAGAA GGCGATCGCCGCGCC-GGC GTTG GCCAGGCGCTG-GAACGCC TCGCCCTGAAGATGG Caul_3718 4015755 - 4014742 - | xanthine dehydrogenase accessory protein XdhC Caul_3719 4018267 - 4015928 - | xanthine dehydrogenase, molybdopterin binding subunit Caul_3720 4019741 - 4018260 - | xanthine dehydrogenase, small subunit Caul_3721 4020090 - 4019743 - | hydroxyisourate hydrolase TERM 2627 4020066 - 4020021 - G 83 -12.6 -4.07568 | gap 2, opp_overlap 4020040 4020063 CGTTTCGGGCGAAAA CCCGA-ACGACGACC-CCCGCC GCCG GGCGGCCGGCCGCCGTGTCGAG GATATGGGTGGTCAG Caul_3722 4020469 - 4022769 + | malic enzyme TERM 2628 4022831 - 4022886 + T 81 -15.3 -3.09273 | gap 1, opp_overlap 4022831, overlap 4022868 TCGACGCACGAAAAA GGCCCCGCAGAGAACCCTCCCCCGTC TCCAC GACAGGGAAAGGCTC-CAGCGGGGCC TGTGTCTTGGCCGGA TERM 2629 4022886 - 4022831 - T 100 -24.1 -4.7497 | gap 1, opp_overlap 4022831 4022868 TCGACGCACGAAAAA GGCCCCGCAGAGAACCCTCCCCCGTC TCCAC GACAGGGAAAGGCTC-CAGCGGGGCC TGTGTCTTGGCCGGA TERM 2630 4022931 - 4022905 - T 84 -15.8 -3.28712 | opp_overlap 4022905 4022906 4022918, overlap 4022906 GTCTTGGCCGGACAA CCGGCCGAACGC TCC GCGCCCGGCCGA TTTCCGATCCTTAGA TERM 2631 4022930 - 4022906 - T 83 -17.1 -2.57132 | opp_overlap 4022905 4022906 4022918, overlap 4022905 TCTTGGCCGGACAAC CGGCCGAACGC TCC GCGCCCGGCCG ATTTCCGATCCTTAG Caul_3723 4023481 - 4022942 - | cold-shock DNA-binding domain-containing protein TERM 2632 4024010 - 4024040 + H 74 -11.9 -3.48276 | gap 1, opp_overlap 4024007 4024005 CAGCAAAAAGGATGC TGC-CGGCGAGCTT TTTG GGGCTCGCCGAGCA TTGTGTGAAGAAGAC TERM 2633 4025180 - 4025193 + H 75 -4.5 -4.7254 | overlap 4025175 GTCGCCTTGCGGCTT CGCAG AGCC CTGTG TTTTTGATAAACAGT TERM 2634 4028115 - 4028100 - H 71 -9 -3.75153 | GTCCCCGAAGGGAAA GCCTCA TCTC TGAGGC GGTCCGGGCATGTCA TERM 2635 4029741 - 4029756 + H 74 -4.6 -4.58303 | TTGAAGCATCCACCC CGAGTC AACC GCCTCG TTTTCTAATCTTTCA TERM 2636 4029841 - 4029804 - H 86 -4.8 -5.14985 | gap 2, overlap 4029805 GCAAAGAGACAAAAA GGGATCC-GA-GGGCTGC CGAG GCTGCCCGCCTGGATCCT GACCGAGTCGATTGG TERM 2637 4029901 - 4029889 - H 81 -7.7 -4.41616 | overlap 4029875 4029893 AGCTTTCCAAAGAAA GCAAG AGC CTTGC AGCCCCTGCGGTCGC TERM 2638 4030907 - 4030876 - H 90 -13.8 -4.07568 | opp_overlap 4030874 4030882, overlap 4030882 GGGGGCCGGCCAAAA CGAAAATGGCCTCC CGAA GGAGGCCATTCTAG TCTTTGGGTGCGGGG TERM 2639 4030901 - 4030882 - H 100 -13.6 -4.67038 | opp_overlap 4030874 4030882, overlap 4030876 CGGCCAAAACGAAAA TGGCCTCC CGAA GGAGGCCA TTCTAGTCTTTGGGT TERM 2640 4030882 - 4030901 + H 81 -13.6 -3.57239 | opp_overlap 4030882 4030876, overlap 4030874 CGGCCAAAACGAAAA TGGCCTCC CGAA GGAGGCCA TTCTAGTCTTTGGGT TERM 2641 4031206 - 4031236 + H 74 -11.9 -3.48276 | gap 1, opp_overlap 4031203 4031201 CAGCAAAAAGGATGC TGC-CGGCGAGCTT TTTG GGGCTCGCCGAGCA TTGTGTGAAGAAGAC TERM 2642 4032376 - 4032389 + H 75 -4.5 -4.7254 | overlap 4032371 GTCGCCTTGCGGCTT CGCAG AGCC CTGTG TTTTTGATAAACAGT TERM 2643 4035311 - 4035296 - H 71 -9 -3.75153 | GTCCCCGAAGGGAAA GCCTCA TCTC TGAGGC GGTCCGGGCATGTCA TERM 2644 4036921 - 4036872 - H 85 -5.7 -4.98255 | gap 1, opp_overlap 4036886 4036910, overlap 4036874 TTCGAAGGACAAAAA CGCGGCGACGAAGCCCTTGAAGAC AGG GTCTTCGCAAA-TTCGTCACCGAG TCGATTGAAGCTGCG Caul_3724 4037204 - 4037644 + | BadM/Rrf2 family transcriptional regulator TERM 2645 4037716 - 4037660 - T 77 -14.6 -2.8805 | gap 1, opp_overlap 4037677 4037678 4037680, overlap 4037677 4037680 ACGACGCTCTATACA GGGGGCTCTCTATATAATGAGCGTGCC CCCA GG-ACGCTCCTTATATAGAGCGTCCTC AAGAGGCGTCGTCAG Caul_3725 4038159 - 4037728 - | signal-transduction protein Caul_3726 4038384 - 4038854 + | HfaA protein Caul_3727 4038844 - 4039854 + | HfaB protein Caul_3728 4039832 - 4041013 + | hypothetical protein TERM 2646 4041231 - 4041276 + T 72 -13.4 -2.71712 | gap 2, overlap 4041230 CCGCTCCGATGGAGG CCCCCG-ACGG-GCGGAGAGTT GGCT AACTCTCCGGACCGTGCGGGCG ATTTCAGCCCGCACC TERM 2647 4041655 - 4041607 - T 76 -13.1 -3.40403 | gap 2 GGCGGGGGAGGAGAA GGC-CGGCCTCGCC-CTTCCCGC CCTCC GCCCGCAGCGGCGAGGCCGCGCC TTGAAACCTTGATGG TERM 2648 4041796 - 4041819 + T 79 -9.6 -4.13767 | gap 1 AGGTTTTAAGGCGTG GCCC-CATCCG GGG TGGATGCGGGC TTTTCGCATAGCAGA Caul_3729 4042468 - 4041881 - | hypothetical protein Caul_3730 4043555 - 4042695 - | integrase catalytic region TERM 2649 4043562 - 4043584 + r 91 -3.3 -5.45726 | gap 1 GAACTTCATCGGGAG GCCGCTC-CG AAGA TGAGCGCGGC TTTTTTTAGGATGTC Caul_3731 4043866 - 4043552 - | transposase IS3/IS911 family protein TERM 2650 4043715 - 4043663 - G 100 -25.6 -2.8547 | gap 1, opp_overlap 4043665 4043689 AGCGGCCAGATCAGA CGGCGACGGGGCCGGCGCTTGCG TGTGGGGG CGCC-GCGCCGGCCCCGTCGCCC GCGTCCCGTATTGGA Caul_3732 4044568 - 4044978 + | CopY family transcriptional regulator TERM 2651 4045023 - 4045049 + G 77 -15 -3.18264 | opp_overlap 4045010 AAGTCCAGCGTGGTG GCCGGCGCCGGC CTG GCCTGCGCCCGC TTCCTGGCTCAGCGC Caul_3733 4044975 - 4046765 + | peptidase M56 BlaR1 Caul_3734 4046903 - 4049827 + | peptidase M16 domain-containing protein TERM 2652 4049867 - 4049843 - f 71 -5.6 -4.38712 | CCTACGCCCACAAAA CCCGCTCTTC CCGGC GAAGGCCGGG ACCCAGATGGAAAAG Caul_3735 4050195 - 4051130 + | LysR family transcriptional regulator Caul_3736 4051217 - 4051426 + | hypothetical protein Caul_3737 4051692 - 4052378 + | GCN5-related N-acetyltransferase TERM 2653 4052533 - 4052564 + T 74 -10 -3.8186 | opp_overlap 4052535, overlap 4052534 4052537 TGGCCCAAAACAAAA AAGACCCGGAAGGC GCTC GCCCTCCGGGTCCC TTGTTCGTTCAGATC TERM 2654 4052534 - 4052563 + T 74 -13.5 -2.88634 | opp_overlap 4052535, overlap 4052533 4052537 GGCCCAAAACAAAAA AGACCCGGAAGGC GCTC GCCCTCCGGGTCC CTTGTTCGTTCAGAT TERM 2655 4052562 - 4052535 - T 100 -19.2 -5.79595 | opp_overlap 4052534 4052533 4052537 GCCCAAAACAAAAAA GACCCGGAAGGC GCTC GCCCTCCGGGTC CCTTGTTCGTTCAGA TERM 2656 4052537 - 4052560 + T 72 -13.8 -2.68886 | opp_overlap 4052535, overlap 4052534 4052533 CCAAAACAAAAAAGA CCCGGAAGGC GCTC GCCCTCCGGG TCCCTTGTTCGTTCA Caul_3738 4054578 - 4052590 - | OPT family oligopeptide transporter TERM 2657 4054636 - 4054593 - R 76 -9.6 -4.09739 | gap 1, overlap 4054595 4054600 TGAAGGGTCCCAAAA CAGTT-AAGGCGGCCGGACCT TGC ACGTCCGACCGCCCCCAACTC AAGTGGCGTTCCACA TERM 2658 4054634 - 4054595 - R 75 -12.2 -3.64488 | gap 1, overlap 4054593 4054600 AAGGGTCCCAAAACA GTT-AAGGCGGCCGGACCT TGC ACGTCCGACCGCCCCCAAC TCAAGTGGCGTTCCA TERM 2659 4054628 - 4054600 - R 88 -16.7 -3.28785 | overlap 4054595 4054593 TCCCAAAACAGTTAA GGCGGCCGGACCT TGC ACGTCCGACCGCC CCCAACTCAAGTGGC Caul_3739 4055031 - 4054723 - | hypothetical protein Caul_3740 4055435 - 4055130 - | hypothetical protein TERM 2660 4055565 - 4055530 - R 88 -17.6 -3.0976 | opp_overlap 4055530, overlap 4055537 TGGAATATGCGAACA CGAAAAAGGGCCCGGC GTTC GCCGGACCCTTCGTCG TTCTGGATCGTCGTC TERM 2661 4055530 - 4055565 + r 74 -13.2 -3.38272 | opp_overlap 4055530 4055537 TGGAATATGCGAACA CGAAAAAGGGCCCGGC GTTC GCCGGACCCTTCGTCG TTCTGGATCGTCGTC TERM 2662 4055558 - 4055537 - R 100 -15.1 -4.87626 | opp_overlap 4055530, overlap 4055530 TGCGAACACGAAAAA GGGCCCGGC GTTC GCCGGACCC TTCGTCGTTCTGGAT Caul_3741 4056360 - 4055587 - | PhoH family protein TERM 2663 4056411 - 4056388 - H 100 -12.4 -5.1675 | overlap 4056366 TCAGGCATGAAAAAA GGACGTGGCC GAAT GGCGACGTCC CTGAAGTAGATTTGG Caul_3742 4056705 - 4057235 + | transferase family protein TERM 2664 4057724 - 4057692 - g 70 -12.7 -3.28712 | CCGCCGTCTCGACAA CGCTGACGGCGATCG CCT CGATCTGCGTCAACG GCCTGCTGGCCCTCA Caul_3743 4057280 - 4059454 + | integral membrane sensor hybrid histidine kinase Caul_3744 4059489 - 4061153 + | choline dehydrogenase TERM 2665 4061334 - 4061294 - f 100 -21.3 -4.63486 | opp_overlap 4061299 4061301, overlap 4061296 4061320 ATGCGTTGAACAAAA GACTGGAGCCCGACCTGAT GCA ATCAGGTCGGGCTCTAGTG TGAGCCGATCAGCGC TERM 2666 4061332 - 4061296 - f 100 -23.9 -3.93367 | opp_overlap 4061299 4061301, overlap 4061294 4061320 GCGTTGAACAAAAGA CTGGAGCCCGACCTGAT GCA ATCAGGTCGGGCTCTAG TGTGAGCCGATCAGC TERM 2667 4061299 - 4061329 + F 100 -24.2 -2.62396 | opp_overlap 4061296 4061294 4061320, overlap 4061301 TTGAACAAAAGACTG GAGCCCGACCTGAT GCA ATCAGGTCGGGCTC TAGTGTGAGCCGATC TERM 2668 4061301 - 4061327 + F 93 -21 -2.85351 | opp_overlap 4061296 4061294 4061320, overlap 4061299 GAACAAAAGACTGGA GCCCGACCTGAT GCA ATCAGGTCGGGC TCTAGTGTGAGCCGA Caul_3745 4061365 - 4062309 + | aldo/keto reductase TERM 2669 4062554 - 4062510 - T 89 -11.3 -4.36914 | opp_overlap 4062510, overlap 4062511 4062512 CCTGCTCCCAGAAAA CCCCGATGGGAAGGGGTCGCT TCC AGCGCCCCCTTCCCACCTTAC GGCGCGCCCCCTGCC TERM 2670 4062553 - 4062511 - T 80 -14.8 -3.21934 | opp_overlap 4062510, overlap 4062510 4062512 CTGCTCCCAGAAAAC CCCGATGGGAAGGGGTCGCT TCC AGCGCCCCCTTCCCACCTTA CGGCGCGCCCCCTGC TERM 2671 4062552 - 4062512 - T 79 -16.1 -2.52946 | opp_overlap 4062510, overlap 4062511 4062510 TGCTCCCAGAAAACC CCGATGGGAAGGGGTCGCT TCC AGCGCCCCCTTCCCACCTT ACGGCGCGCCCCCTG Caul_3746 4063167 - 4062619 - | hypothetical protein Caul_3747 4063353 - 4064285 + | hypothetical protein TERM 2672 4064312 - 4064333 + F 86 -13.7 -3.96148 | gap 1, opp_overlap 4064312 ACCCGGACAACAAAA GGGCCG-CCC CAT GGGACGGCCC TTTCTCGTCGCGCCC TERM 2673 4064333 - 4064312 - f 100 -15.1 -4.77567 | opp_overlap 4064312 ACCCGGACAACAAAA GGGCCGCCC CATG GGACGGCCC TTTCTCGTCGCGCCC Caul_3748 4064393 - 4064608 + | hypothetical protein Caul_3749 4064648 - 4065292 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_3750 4065379 - 4065639 + | prevent-host-death family protein Caul_3751 4065643 - 4066077 + | hypothetical protein TERM 2674 4066131 - 4066078 - T 72 -12.4 -3.25823 | opp_overlap 4066081, overlap 4066079 4066092 GCGCGCGGAGAGTAA CCGCCCTAGAGCAAGCCGCGCGAT ATAGGA ACCGCACGCCTTGCTCTAGGGTTT TGATTTCGCATCGCT TERM 2675 4066130 - 4066079 - T 77 -15.9 -2.55351 | opp_overlap 4066081, overlap 4066078 4066092 CGCGCGGAGAGTAAC CGCCCTAGAGCAAGCCGCGCGAT ATAGGA ACCGCACGCCTTGCTCTAGGGTT TTGATTTCGCATCGC TERM 2676 4066081 - 4066128 + T 100 -18.5 -4.55798 | opp_overlap 4066079 4066078 4066092 CGCGGAGAGTAACCG CCCTAGAGCAAGCCGCGCGAT ATAGGA ACCGCACGCCTTGCTCTAGGG TTTTGATTTCGCATC Caul_3752 4067051 - 4066185 - | serine O-acetyltransferase TERM 2677 4066908 - 4066938 + g 74 -14.6 -3.05268 | opp_overlap 4066908 CACAGCGTTGAGCAA CGAGGCCAGGGCCG GCT CGGCCTTGGCGGCG TGTTCGGCCTGGTTG Caul_3753 4067720 - 4067100 - | NUDIX hydrolase TERM 2678 4067857 - 4067836 - H 100 -14.5 -4.89567 | opp_overlap 4067831 4067851 GCGCAAAACAGAAAA CTGGAGACC GCCA GGTCTCCAG CGCGCTTCCTGGAGG Caul_3754 4067878 - 4068495 + | nitroreductase TERM 2679 4069019 - 4069046 + G 70 -8.4 -3.85698 | gap 1 GATTCGCGCCTATGG CGCCGGCAGCATC GCG GA-GCTGATGGCG TTTCTGGAGCCGCAA TERM 2680 4069971 - 4069994 + G 80 -16.7 -3.14344 | AGCGAGACCTCCACC GGCCGCGGC CTGGAC GCCGCGGCC TTCATGGCCGGCGTC Caul_3755 4068771 - 4071608 + | TonB-dependent receptor plug TERM 2681 4071635 - 4071649 + T 78 -3.4 -5.07652 | opp_overlap 4071613, overlap 4071605 ACCTGATTGCATCAG GCCGGG GCT CTAGGC TTTTGTTTTAACGCA TERM 2682 4071782 - 4071826 + T 79 -8.5 -4.27316 | opp_overlap 4071756 4071798 4071799, overlap 4071756 GGACCATTGCAGAGG CCTCGGCAGTCGAAAACCTCA TCC TGAGCTTGTCGAAGGACGAGG TTTTCGCTTCCCGAA Caul_3756 4072306 - 4071851 - | 7-cyano-7-deazaguanine reductase Caul_3757 4072399 - 4073202 + | short-chain dehydrogenase/reductase SDR Caul_3758 4073457 - 4074182 + | hypothetical protein TERM 2683 4074208 - 4074235 + T 100 -24.2 -4.21438 | CTGGAAGTTCGAACG GGCCGCCCCGAC CTTG GTCGGGGCGGCC TTGTTTCTTGGACTA Caul_3759 4075501 - 4074248 - | major facilitator transporter TERM 2684 4075660 - 4075682 + r 71 -13.5 -2.61264 | overlap 4075659 GACCTTCGGCCGCCA CCTTCTCCC GCAAG GGGAGAAGG ATTATGCCTCAGAAC Caul_3760 4078099 - 4075691 - | TonB-dependent receptor TERM 2685 4077494 - 4077524 + g 90 -14.1 -4.05004 | gap 1, opp_overlap 4077493 GTCGGCCGAACCCAG CTTGACCGG-CAGG GCGA CCTGTCCGGTCAGG TTCTTCTTGTCATAG Caul_3761 4079115 - 4078372 - | GntR family transcriptional regulator Caul_3762 4079383 - 4080444 + | signal transduction histidine kinase TERM 2686 4080546 - 4080502 - f 100 -20.2 -5.46706 | opp_overlap 4080507 4080510 ATGCGAAAACAAAAA CTAGAGCATCGCGTGCGA TTCCTTTCG TCGCGCGCGATGCTCTAG GCCTAGGAGCCCTCA Caul_3763 4080561 - 4081061 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Caul_3764 4081855 - 4081058 - | NLPA lipoprotein TERM 2687 4081897 - 4081945 + H 78 -14.6 -3.03441 | opp_overlap 4081919 GGGTTGGGTATTGCC CGCTTCCCGCTGGATCGGGAAA TCAGT TTTCCTGATCCGGCGCGCAGAG TCTTGAACCATCGTC Caul_3765 4082014 - 4082268 + | hypothetical protein Caul_3766 4082661 - 4082299 - | hypothetical protein Caul_3767 4083488 - 4082823 - | binding-protein-dependent transport systems inner membrane component Caul_3768 4084480 - 4083485 - | ABC transporter related Caul_3769 4086727 - 4084595 - | multi-sensor hybrid histidine kinase Caul_3770 4088186 - 4087257 - | amidohydrolase 2 Caul_3771 4088984 - 4088199 - | HpcH/HpaI aldolase Caul_3772 4089904 - 4088984 - | hypothetical protein TERM 2688 4089066 - 4089048 - G 73 -10.2 -3.86897 | TTCATGTCGGAGAAA TCGCGCCG GGG CGGCGAGA AGATATCGACCAGCA Caul_3773 4090380 - 4089934 - | hypothetical protein Caul_3774 4091766 - 4090480 - | major facilitator transporter TERM 2689 4091897 - 4091932 + r 80 -14.6 -3.17075 | GCCCGCCCGGCGACT TGTCCCGGCGGGCGCC GAAA GTTGCCCGCGGGGACG TTGGGTTCAGGCGAA TERM 2690 4091984 - 4091954 - R 71 -11 -3.51825 | overlap 4091955 TCAGGCGAAGTAGAA TCGCAGCGCCGTGT CGG ACAGGGCGCGGCGG GTGGCCAGATCCGGC TERM 2691 4091983 - 4091955 - R 75 -14.5 -2.70774 | overlap 4091954 CAGGCGAAGTAGAAT CGCAGCGCCGTGT CGG ACAGGGCGCGGCG GGTGGCCAGATCCGG Caul_3775 4092784 - 4091939 - | amidohydrolase 2 TERM 2692 4092535 - 4092582 + g 89 -22.1 -2.87963 | gap 2, overlap 4092532 CCGTGTCGGGCGCGA CGATCGCCGTCGCGC-GC-AGGC GCGA GCCGAGCCGCGCGGCGGCGATCG TGTAGTCGTTGTAGA Caul_3776 4093557 - 4092820 - | short-chain dehydrogenase/reductase SDR TERM 2693 4093626 - 4093612 - R 84 -11.4 -4.12188 | GGACGATCGTCAAAA GGCGAC GGC GTCGCC GCCCTTGAGATGCAG Caul_3777 4094541 - 4093606 - | hypothetical protein Caul_3778 4096020 - 4094551 - | aldehyde dehydrogenase TERM 2694 4095393 - 4095352 - G 83 -15.1 -3.54741 | gap 1, opp_overlap 4095388, overlap 4095354 4095355 GACGATGTCGCCAAA CAGCGCCGGCGCGCTGACCA CGA CGCTCAGCACGCCGGC-CGG AATGCCGGCCTCTTG TERM 2695 4095391 - 4095354 - G 82 -16.3 -3.35046 | gap 1, opp_overlap 4095388, overlap 4095352 4095355 CGATGTCGCCAAACA GCGCCGGCGCGCTGACCA CGA CGCTCAGCACGCCGGC-C GGAATGCCGGCCTCT TERM 2696 4095391 - 4095355 - G 73 -16.5 -2.60813 | opp_overlap 4095388, overlap 4095354 4095352 GATGTCGCCAAACAG CGCCGGCGCGCTGACCA CGA CGCTCAGCACGCCGGCC GGAATGCCGGCCTCT TERM 2697 4096240 - 4096203 - R 79 -16.2 -2.52676 | gap 1 TACGCCGCCAAGTCA CGCCGC-CCGGGCGCCG GGCTG CGCCGCGCGGCGCGGCG CCGATTCGGACCGGA Caul_3779 4097219 - 4096200 - | AraC family transcriptional regulator Caul_3780 4098088 - 4097351 - | GntR family transcriptional regulator TERM 2698 4098253 - 4098308 + H 83 -16.1 -2.87564 | gap 2 GCCATTCGTTTCGCA GG-GCGGCGACTGGCGCCGCCG-CGCC GGCC GTCGTCGGCGGTGCAAGTCGCAGTGCC TCTATGAGCAAGTCC Caul_3781 4098346 - 4099539 + | iron-containing alcohol dehydrogenase TERM 2699 4099597 - 4099564 - T 83 -15.9 -3.14132 | gap 1 GGTCTCCGCCAGGAA CCGCGCCGCCGGACGC ACC GCGAT-GGCGGCGCGG CCGCTCCCGCCCCTG Caul_3782 4100188 - 4099640 - | hypothetical protein TERM 2700 4100357 - 4100313 - R 100 -25.1 -5.24129 | CCCGTCCACAAAAAA GTCCCGATGCACGGCCCCGGC AAG GCCAGGACCACACATCGGGAC GCAAGAAGCGCAGCG Caul_3783 4103382 - 4100419 - | TonB-dependent receptor plug TERM 2701 4103726 - 4103698 - H 73 -11 -3.67296 | gap 1 GATCACGGACGCAAA GCCTGCCCGCGAC CATG GTCGCGGT-AGGC ACGAGCGTCAAAATG Caul_3784 4103794 - 4104705 + | hypothetical protein Caul_3785 4104732 - 4105829 + | oxidoreductase domain-containing protein TERM 2702 4105829 - 4105873 + T 71 -11.1 -3.41051 | opp_overlap 4105824 4105823 CACGATCAAGCTGTA GGAGCCGTCGCCCGGCCATGC CAA GCCTGGCCCGCCGCCCGCGCC TTCTGGTGGCGCTCC Caul_3786 4106393 - 4105890 - | hypothetical protein TERM 2703 4106371 - 4106336 - G 85 -18.4 -2.97051 | opp_overlap 4106340 4106342, overlap 4106328 4106340 AGAAATTGGAGAAAT GAAACATGTCGCCCCC ACGC GGGAGCGACATGTGTC TCACGAATCGAGCCC TERM 2704 4106340 - 4106367 + g 72 -15.6 -2.87931 | opp_overlap 4106328 4106340 4106336, overlap 4106342 ATTGGAGAAATGAAA CATGTCGCCCCC ACGC GGGAGCGACATG TGTCTCACGAATCGA TERM 2705 4106367 - 4106340 - G 100 -17.8 -4.14397 | opp_overlap 4106340 4106342, overlap 4106328 4106336 ATTGGAGAAATGAAA CATGTCGCCCCC ACGC GGGAGCGACATG TGTCTCACGAATCGA TERM 2706 4106436 - 4106379 - G 72 -14.1 -3.14344 | gap 1, overlap 4106396 CATGTGTCTCACGAA TCGAGCCC-AGGCCAAGAGCCTCGCGCC TCC GGCGCGAGACCCTCGGCCCCAAAAGCGA TCAGGCGCTCTGGAC TERM 2707 4106418 - 4106396 - R 88 -17 -3.06162 | overlap 4106379 GAGCCCAGGCCAAGA GCCTCGCGCC TCC GGCGCGAGAC CCTCGGCCCCAAAAG Caul_3787 4106778 - 4106437 - | hypothetical protein TERM 2708 4106794 - 4106810 + r 81 -15.1 -3.10796 | TGGACTGTCTCCCCC CGCGCCC CGG GGGCGCG TCTTGGCTGATGACC TERM 2709 4106871 - 4106856 - R 78 -11.8 -3.72576 | GTCTTGGCGATGAAA GGGCGC CGCG GCGCCC GTCGGGTCAGCCGTG Caul_3788 4107353 - 4106997 - | hypothetical protein Caul_3790 4107840 - 4108229 + | XRE family transcriptional regulator Caul_3791 4109044 - 4108280 - | molybdopterin binding domain-containing protein TERM 2710 4109596 - 4109579 - g 71 -11.3 -3.63895 | GCCAAGCACCTGAAA GACCTCG CCGC CGAGGTC GCCAAGGGCGCGCGG Caul_3792 4109096 - 4109809 + | sugar fermentation stimulation protein Caul_3793 4109820 - 4110650 + | methionine aminopeptidase, type I TERM 2711 4110795 - 4110737 - f 71 -8.9 -3.82824 | gap 4, overlap 4110734 4110738 GATCACTGAGAACAA GCGCGCCCGAGCCTGGCGTGGCCGAGCGC CCCAC GCGCGCCGCC-CACCAG-CTCGG-C-CAC CGCGAACGTCTGCGC Caul_3794 4110754 - 4111344 + | DNA repair protein RadC TERM 2712 4111590 - 4111574 - g 95 -10.1 -4.81852 | overlap 4111565 CCAGAAGCAAGAAAA CCTCGCC GAC GGCGAAG GGCGCGGCACCGGCC Caul_3795 4111503 - 4112744 + | integrase family protein Caul_3796 4112741 - 4113160 + | hypothetical protein TERM 2713 4113404 - 4113414 + G 72 -8.2 -4.05788 | CGGCCGATGGCGAGT GGCG AAC CGCC TTTGCTTTCGACCCA Caul_3797 4113202 - 4113567 + | hypothetical protein TERM 2714 4113917 - 4113964 + G 77 -11.3 -3.82604 | gap 1 GCGTCAAGTCGGAGG GCTGGGC-CTCGTCGGAGGATT GCTTG ACTCCTCAGACGATCGCCCGGC TTCTTGCTTCAATGA Caul_3798 4113572 - 4113943 + | helix-turn-helix domain-containing protein Caul_3799 4113940 - 4115259 + | hypothetical protein Caul_3800 4115259 - 4115789 + | hypothetical protein Caul_3801 4115786 - 4117834 + | SMC domain-containing protein Caul_3802 4117831 - 4120149 + | hypothetical protein TERM 2715 4122844 - 4122832 - g 72 -3.3 -4.63928 | opp_overlap 4122833, overlap 4122833 ATATGATCCCAAAAA GGCGT GGA ACGCT TTGAGAGTCGACGGG TERM 2716 4123175 - 4123144 - g 82 -13.8 -3.71873 | gap 1, opp_overlap 4123154, overlap 4123145 CCATCGAGATGCAAA CGTCGCAGAACCCGC TTG GCGGGTTTTGCGA-G ACCATTTCGGTTTGT TERM 2717 4123154 - 4123166 + G 75 -10.5 -4.08064 | opp_overlap 4123144 4123145 GCAAACGTCGCAGAA CCCGC TTG GCGGG TTTTGCGAGACCATT Caul_3803 4120364 - 4123894 + | helicase-like protein Caul_3804 4125441 - 4124317 - | TIR protein Caul_3805 4126110 - 4125487 - | hypothetical protein Caul_3806 4127873 - 4126107 - | DNA helicase II TERM 2718 4126300 - 4126281 - G 71 -2.7 -4.58395 | overlap 4126283 GTTATTCTCGAAAAA CTCCAGC TTGTCG GCCGGCG GACCAGCGTCGATCC Caul_3807 4129941 - 4127866 - | hypothetical protein TERM 2719 4128443 - 4128421 - G 77 -4.1 -4.76312 | gap 1, overlap 4128413 4128422 CAGAAGATCGAAAAA CCGAT-GCGC GTAG GCGCCACCGA CCTCCATTACTGTCA TERM 2720 4128874 - 4128849 - G 82 -8.3 -4.4078 | overlap 4128873 GCTGCCGAATGAAAA CCTCTTGCATC TGCG GATGCAAATGG GCCTCAGGCTCCTCG Caul_3808 4130621 - 4132705 + | nuclease TERM 2721 4132738 - 4132711 - f 79 -14 -3.51924 | opp_overlap 4132712, overlap 4132712 CGCCGAGTGACACAA GGCCGGGGCCGC GTCA GCGGTCCCGGCT TTTCCGCCTCGCATA TERM 2722 4132712 - 4132737 + F 100 -19.7 -4.11394 | opp_overlap 4132711 4132712 GCCGAGTGACACAAG GCCGGGGCCGC GTCA GCGGTCCCGGC TTTTCCGCCTCGCAT TERM 2723 4132737 - 4132712 - f 84 -17.5 -2.7094 | opp_overlap 4132712, overlap 4132711 GCCGAGTGACACAAG GCCGGGGCCGC GTCA GCGGTCCCGGC TTTTCCGCCTCGCAT TERM 2724 4132791 - 4132759 - f 89 -14.8 -3.83026 | GCCTCGCATAGGAAA TTTTCCGGCCGCGC CTCTC GCGCGGCCGGATGA CCTCGACAGACCGAC Caul_3809 4132925 - 4133356 + | hypothetical protein TERM 2725 4133404 - 4133421 + F 70 -12.7 -2.90075 | opp_overlap 4133402 TTCGCATGAGGAAGC CCCGCTC GGGT GAGCGGG TCTCCTTGAGGACAC TERM 2726 4133552 - 4133576 + F 73 -10.7 -3.61517 | GCGTGGGTGTGCGAT GATCGTCCGTG CTG CACGGGTGGTC TTCTTCCAGACAGCT TERM 2727 4133911 - 4133900 - f 100 -7.2 -5.63517 | overlap 4133901 TCGCGAAACAAAAAA GCCG CCGC CGGC CGCCTTACACGTTGT Caul_3810 4134020 - 4134331 + | hypothetical protein TERM 2728 4134371 - 4134350 - f 100 -17.3 -3.66844 | opp_overlap 4134350 CGGACACTTCAAGAA GCCCCGCTC ACCC GAGCGGGGC TTCGTCATGCTCATG TERM 2729 4134350 - 4134371 + F 89 -17.3 -3.23692 | opp_overlap 4134350 CGGACACTTCAAGAA GCCCCGCTC ACCC GAGCGGGGC TTCGTCATGCTCATG TERM 2730 4135475 - 4135489 + G 70 -3.4 -4.52589 | opp_overlap 4135471 GTCGGATCGAAGACG CTGGGC ATC GCCTCG TTTTATCTCCGCGCC Caul_3811 4134716 - 4135906 + | hypothetical protein TERM 2731 4135910 - 4135953 + T 100 -27.7 -4.11484 | opp_overlap 4135917, overlap 4135917 CGCGCCGTCTGACTT CCACAAAGCCGTGCAGCCG CTTTTC CGGTTGCACGGCTTTGTGG TTTTGAGCGCTTACG TERM 2732 4135917 - 4135946 + T 100 -17.2 -4.208 | opp_overlap 4135917, overlap 4135910 TCTGACTTCCACAAA GCCGTGCAGCCG CTTTTC CGGTTGCACGGC TTTGTGGTTTTGAGC TERM 2733 4135946 - 4135917 - T 89 -15 -3.87815 | opp_overlap 4135917 4135910 TCTGACTTCCACAAA GCCGTGCAGCCG CTTTTC CGGTTGCACGGC TTTGTGGTTTTGAGC Caul_3812 4136321 - 4136085 - | XRE family transcriptional regulator TERM 2734 4136380 - 4136334 - H 90 -19.6 -2.62396 | opp_overlap 4136341 4136374, overlap 4136350 CATGGCGGCACATGA GCCTGTATCGGAACTATCGTTC CAG GAACGATAGTTCCGATTCGTGC AGGCCTATGATATGT TERM 2735 4136341 - 4136373 + H 100 -22.3 -3.14683 | opp_overlap 4136334 4136350 GCACATGAGCCTGTA TCGGAACTATCGTTC CAG GAACGATAGTTCCGA TTCGTGCAGGCCTAT Caul_3813 4136508 - 4136771 + | hypothetical protein TERM 2736 4136975 - 4136957 - g 73 -7.3 -4.15066 | opp_overlap 4136956 CATCGATAAATTAAA CCCGGCC GACTT GGCCTGG GAATTTCTACGCCGC Caul_3814 4136898 - 4137098 + | hypothetical protein Caul_3815 4137235 - 4137609 + | hypothetical protein Caul_3816 4137748 - 4138029 + | putative transcriptional regulator Caul_3817 4138041 - 4138925 + | putative plasmid replication protein A TERM 2737 4139057 - 4139071 + F 71 -8.6 -3.85698 | opp_overlap 4139054 4139057 AACTTAACTAACCTA GATTCC TAC GGAATC TTTCTAACGGAACCC TERM 2738 4139078 - 4139088 + F 72 -2.4 -4.7078 | TACGGAATCTTTCTA ACGG AAC CCGC TTTTTGCGTCGTTGC Caul_3818 4139137 - 4139775 + | cobyrinic acid ac-diamide synthase Caul_3819 4139772 - 4140026 + | hypothetical protein Caul_3820 4140023 - 4140544 + | hypothetical protein Caul_3821 4140541 - 4141086 + | putative conjugal transfer protein precursor Caul_3822 4141132 - 4141467 + | hypothetical protein Caul_3823 4141472 - 4142404 + | lytic transglycosylase catalytic TERM 2739 4142521 - 4142503 - f 70 -7.3 -3.9712 | opp_overlap 4142494 4142478 4142505 CGATGGCAGGATAAA GGGGCGC GATGT GCGCCTC TGTCCGGTTGTGTTC TERM 2740 4142710 - 4142720 + G 70 -8.2 -3.85698 | overlap 4142682 CGACCAGCGCGCAAC GGGC GCG GCCC TTTATCGCCCAGGCG TERM 2741 4142738 - 4142766 + G 73 -13.1 -3.53012 | TATCGCCCAGGCGCT TGCCGCCGCCC AACGCGC GGGCGGCAGCA TTTCCCGACAAGGAA TERM 2742 4143584 - 4143558 - g 78 -6.4 -4.58663 | ACTATCTCCGAAAAA GCCGAGGCGACG ATG CGCGAACTCGGC GAACGCGGCGACATC Caul_3824 4142649 - 4144388 + | hypothetical protein TERM 2743 4145179 - 4145162 - g 82 -4.1 -5.03715 | overlap 4145151 4145163 ACCACTGGGAAAAAA CCAGC CACGCGCT GCTGG TCGGCGCGATCCTCC TERM 2744 4145227 - 4145241 + G 70 -12.8 -3.27022 | opp_overlap 4145215 4145220 4145225 4145224 GAAGACAAGACACTC GCCGGC GTC GCCGGC TTCCTCTCCGATCCA Caul_3825 4144420 - 4146420 + | TRAG family protein Caul_3826 4146428 - 4146862 + | hypothetical protein Caul_3827 4147079 - 4148044 + | P-type conjugative transfer ATPase TrbB Caul_3828 4148041 - 4148373 + | conjugal transfer protein TrbC TERM 2745 4148397 - 4148411 + G 73 -7 -4.18494 | ATGGTCGACCATGCG GCCGAG GTG CCCGGC TTTTCCGTGCCCGTC Caul_3829 4148373 - 4148654 + | conjugal transfer protein TrbB TERM 2746 4149002 - 4148982 - g 82 -13.3 -3.77666 | opp_overlap 4148977, overlap 4148997 GATACCGAACGCAAA GCCGACTTC GAG GAAGCCGGC GCGCATTTCGAGTCC Caul_3830 4148667 - 4151123 + | AAA ATPase TERM 2747 4151148 - 4151171 + G 79 -14.6 -3.28712 | gap 1, overlap 4151156 TCTTCTCTCGCTCCC GCACCGCCCGC TTC GCG-GCGGTGC TTCTCGCCGCCCCGA TERM 2748 4151156 - 4151191 + G 72 -8.9 -4.10161 | gap 1, overlap 4151148 CGCTCCCGCACCGCC CGC-TTCGCGGCGGTG CTTCT CGCCGCCCCGATCGCG TTTTCGCCCGTCATG Caul_3831 4151120 - 4151890 + | P-type conjugative transfer protein TrbJ TERM 2749 4152274 - 4152250 - g 71 -11.3 -3.57462 | GATCCCATCCGCAAA GAGGCGATGCC GCT GGCCGCGCCTC AACCCGAGGCTCGGT Caul_3832 4151902 - 4152291 + | hypothetical protein Caul_3833 4152296 - 4153660 + | P-type conjugative transfer protein TrbL Caul_3834 4153660 - 4154343 + | conjugal transfer protein Caul_3835 4154340 - 4155365 + | P-type conjugative transfer protein TrbG Caul_3836 4155362 - 4156597 + | conjugation TrbI family protein Caul_3837 4156597 - 4156821 + | hypothetical protein Caul_3838 4157816 - 4156833 - | LysR family transcriptional regulator Caul_3839 4159020 - 4157917 - | amine oxidase TERM 2750 4158266 - 4158242 - G 79 -7.2 -4.44974 | gap 2 GGAAATCCGACAAAA CCGAAGAGCGCC GCT GG-GC-CTTCGG GCGCGGAAGCATCAT Caul_3840 4159705 - 4159031 - | anti-ECFsigma factor, ChrR TERM 2751 4159814 - 4159840 + r 74 -12.2 -3.53224 | AGCCGTACCGGCGGC GCACGGCGGATG TGT CATCCGCCGCAC TTTGGGCCGACGGTG Caul_3841 4160151 - 4159870 - | hypothetical protein TERM 2752 4160729 - 4160749 + G 72 -3.8 -4.55295 | GTGGTGGAGGCCCAA CGCGACCG CTGGT CGACCGCG TTTCTTTATGACGAA Caul_3842 4160267 - 4161190 + | LysR family transcriptional regulator Caul_3843 4161469 - 4161696 + | hypothetical protein Caul_3844 4161803 - 4161964 + | DNA repair protein RadC Caul_3845 4162932 - 4162039 - | AraC family transcriptional regulator TERM 2753 4162920 - 4162909 - G 79 -2.2 -4.87626 | gap 1 CCCGAAGAGGAAAAA GCTCG GAA CG-GC GGCTCTTTGCATCGA Caul_3846 4163089 - 4164264 + | 4-hydroxybenzoate 3-monooxygenase Caul_3847 4164274 - 4164984 + | 3-oxoacid CoA-transferase, A subunit Caul_3848 4164984 - 4165631 + | 3-oxoacid CoA-transferase, B subunit Caul_3849 4165628 - 4165798 + | hypothetical protein Caul_3850 4165809 - 4166522 + | protocatechuate 3,4-dioxygenase, beta subunit Caul_3851 4166515 - 4167165 + | protocatechuate 3,4-dioxygenase, alpha subunit TERM 2754 4167523 - 4167489 - g 74 -14.2 -3.28712 | CGCCCTGCTCCACAA GGGCGCCACCAGCCAG GAC CTGGCCGACACCGCCC TGATGCTGCAGGCCA Caul_3852 4167187 - 4168341 + | 3-carboxy-cis,cis-muconate cycloisomerase Caul_3853 4168341 - 4169531 + | 3-oxoadipate enol-lactonase Caul_3854 4169708 - 4169995 + | thiamineS protein Caul_3855 4169998 - 4170567 + | molybdenum cofactor biosynthesis protein B Caul_3856 4170564 - 4171751 + | molybdenum cofactor synthesis domain-containing protein Caul_3857 4172384 - 4171785 - | hemerythrin HHE cation binding domain-containing protein Caul_3858 4172571 - 4174805 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 2755 4175513 - 4175571 + G 71 -10.8 -3.53811 | gap 1, opp_overlap 4175480, overlap 4175548 4175550 AACCCGCCGTCTTCG GCCCGGTCGA-TCGCGTCGCCCTGGCC CTGACC GGCCTGGCCGCCGCGACTTGGGCGGCC TTTCCCGACGCTCCG Caul_3859 4174879 - 4176054 + | NnrS family protein Caul_3860 4176239 - 4177216 + | molybdenum cofactor biosynthesis protein A Caul_3861 4177997 - 4177227 - | transcriptional activator FtrB Caul_3862 4178267 - 4179628 + | major facilitator transporter TERM 2756 4180004 - 4180027 + G 82 -14.6 -3.41051 | overlap 4180008 TCGTCGTGCAGCACC CGGAGACGCC CTAC GGCGTCTTCG TTCTCCTGGCCCTGG Caul_3863 4179625 - 4181058 + | major facilitator transporter Caul_3864 4181055 - 4184786 + | nitrate reductase, alpha subunit Caul_3865 4184783 - 4186306 + | nitrate reductase, beta subunit Caul_3866 4186311 - 4187030 + | nitrate reductase molybdenum cofactor assembly chaperone Caul_3867 4187033 - 4187806 + | respiratory nitrate reductase, gamma subunit Caul_3868 4187810 - 4188928 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2757 4188980 - 4189012 + G 85 -17.1 -3.21099 | gap 1 GTGGCCCTCCCCACC CTGGCCCA-GGCCG CCGAGC CGGCCCTGGGCCAG TTCCTGCTGGACGCC Caul_3869 4188935 - 4190122 + | hypothetical protein Caul_3870 4190151 - 4190705 + | hypothetical protein Caul_3871 4190702 - 4191376 + | carbonic anhydrase TERM 2758 4191474 - 4191435 - f 100 -20.2 -5.27335 | gap 1, opp_overlap 4191436 4191441, overlap 4191436 GCGTTGAAACAAAAA CCTAGAGCCCCG-CCTGAT GAA ATCAGGTCGGGGCTCTAGT CTGGTGGCCAGAGCG TERM 2759 4191436 - 4191473 + F 100 -23.7 -2.78384 | gap 1, opp_overlap 4191435 4191436, overlap 4191441 CGTTGAAACAAAAAC CTAGAGCCCCG-CCTGAT GAA ATCAGGTCGGGGCTCTAG TCTGGTGGCCAGAGC TERM 2760 4191473 - 4191436 - f 100 -23.7 -3.75678 | gap 1, opp_overlap 4191436 4191441, overlap 4191435 CGTTGAAACAAAAAC CTAGAGCCCCG-CCTGAT GAA ATCAGGTCGGGGCTCTAG TCTGGTGGCCAGAGC TERM 2761 4191441 - 4191468 + F 83 -16.4 -2.87468 | gap 1, opp_overlap 4191436 4191435, overlap 4191436 AAACAAAAACCTAGA GCCCCG-CCTGAT GAA ATCAGGTCGGGGC TCTAGTCTGGTGGCC Caul_3872 4191553 - 4192965 + | oxygen-independent coproporphyrinogen III oxidase Caul_3873 4194217 - 4192997 - | acyl-CoA dehydrogenase domain-containing protein Caul_3874 4194496 - 4194903 + | hypothetical protein Caul_3875 4194930 - 4196279 + | membrane dipeptidase Caul_3876 4197045 - 4196404 - | putative sulfite oxidase subunit YedZ Caul_3877 4197965 - 4197045 - | putative sulfite oxidase subunit YedY TERM 2762 4197833 - 4197811 - G 70 -8.3 -3.85698 | overlap 4197812 TCGGTGGTCGAGAAA CCCGGGCCG TAGGT CAGCCCGCG CGCGCTGGCCGACCC Caul_3878 4201035 - 4198162 - | (glutamate--ammonia-ligase) adenylyltransferase Caul_3879 4201529 - 4201068 - | GCN5-related N-acetyltransferase Caul_3880 4202723 - 4201581 - | aromatic amino acid beta-eliminating lyase/threonine aldolase Caul_3882 4203710 - 4204078 + | CopY family transcriptional regulator Caul_3883 4204068 - 4204967 + | peptidase M56 BlaR1 Caul_3884 4205070 - 4205633 + | hypothetical protein Caul_3885 4207054 - 4205648 - | integral membrane sensor signal transduction histidine kinase Caul_3886 4207372 - 4207058 - | plasmid stabilization system protein Caul_3887 4207593 - 4207372 - | hypothetical protein Caul_3888 4208321 - 4207650 - | two component transcriptional regulator TERM 2763 4208373 - 4208345 - R 84 -13.9 -3.78022 | opp_overlap 4208338 4208345 CCCAGATGCACGAAA GGGCGTCACCG TGCGAAT CGATGACGCCC TCTGTCGTGTTGTCG TERM 2764 4208418 - 4208439 + r 70 -12.9 -2.86343 | TGGTGACGTGATCCG CGCGCGGGC GAAA GCCCCCGCG TATCGTCGTTAGCCT Caul_3889 4210028 - 4208454 - | protease Do Caul_3890 4210630 - 4210175 - | cytochrome C biogenesis protein Caul_3891 4212780 - 4210804 - | cytochrome c-type biogenesis protein CcmF TERM 2765 4211434 - 4211410 - G 74 -13.5 -3.37796 | GCCGATCAGCCAGAA GCCCAGCGCCA GAC CGGCGCTGGCC AGGGCGCTGCGCGGC TERM 2766 4211872 - 4211847 - G 71 -9.7 -3.71284 | gap 1, overlap 4211848 TGCTCAGCAACAGAA CCCCGCGCGTCG GAT CGACG-GCGAAG GCGTGGACGCTGGTC TERM 2767 4212878 - 4212829 - R 84 -17.1 -2.70932 | opp_overlap 4212873 GTGGCCTGCGAAGCA GGTCGGATGAGGGGTCGCACGGA CAGG TCGGCGAGACCCCTCATCCGTCG CTGCGCGACACCTTC Caul_3892 4213429 - 4212929 - | CcmE/CycJ protein Caul_3893 4214550 - 4213426 - | cytochrome c-type biogenesis protein CcmI TERM 2768 4213942 - 4213900 - G 75 -10.5 -4.07885 | gap 2 CAGGGCTTCGGAAAA GGCGCGCCGGGCGTCGGCG CCAACCT CGCCGTCGCCCT-CG-GCC ACCAAGGCCTGGCCC Caul_3894 4215989 - 4214649 - | hypothetical protein Caul_3895 4217579 - 4216197 - | integral membrane sensor signal transduction histidine kinase Caul_3896 4218423 - 4217743 - | two component transcriptional regulator Caul_3897 4218760 - 4218443 - | peptidase Caul_3898 4219276 - 4218944 - | toxin ChpA Caul_3899 4219539 - 4219276 - | transcriptional regulator/antitoxin, MazE Caul_3900 4220530 - 4219589 - | heat shock protein DnaJ domain-containing protein Caul_3901 4224450 - 4220611 - | gene transfer agent (GTA) orfg15, like protein Caul_3902 4225040 - 4224462 - | NlpC/P60 family phage cell wall peptidase Caul_3903 4225687 - 4225037 - | hypothetical protein TERM 2769 4225519 - 4225493 - G 70 -12.3 -3.28924 | gap 2, opp_overlap 4225484 CATCCCCGGCGAGAA GCCGGC-CG-CCG TTT CGGCCGCGCCGGC GGTCCAACCGCTGGC Caul_3904 4226319 - 4225687 - | hypothetical protein TERM 2770 4225916 - 4225866 - G 85 -17.4 -3.16191 | CGATAGCGGCATCAA CGGCGAAGGCCGCCGGGGCCAGGG CCA CGCCGGCCACCGCGACCTTGACCG TTCCAGCCACCGGCT TERM 2771 4226359 - 4226339 - H 93 -16.9 -3.53444 | TGACTCCGTGTGAAA CCCTCTCCC ATG GGGAGAGGG AGGGGCCCGCGCGAA TERM 2772 4226458 - 4226435 - H 79 -8.1 -4.36914 | overlap 4226436 GGCGCTCGGAGAAAA CGGTGAGGG CGTAAT CCCTCACCC TCCCCACCGCTACGC TERM 2773 4226457 - 4226436 - H 70 -11.6 -3.21934 | overlap 4226435 GCGCTCGGAGAAAAC GGTGAGGG CGTAAT CCCTCACC CTCCCCACCGCTACG Caul_3905 4226608 - 4227066 + | hypothetical protein Caul_3906 4227133 - 4227558 + | excinuclease ABC subunit C Caul_3907 4228105 - 4227575 - | hypothetical protein Caul_3908 4228314 - 4228105 - | hypothetical protein Caul_3909 4228609 - 4228301 - | hypothetical protein TERM 2774 4228615 - 4228648 + r 100 -22.5 -3.04263 | TTCCTCGCATTTTTC CCCGCTCATCCCGGC GAAT GCCGGGATGAGCGGA TCTTGGAGATCAGAT Caul_3910 4229074 - 4228658 - | TP901-1 family phage major tail protein Caul_3911 4229641 - 4229237 - | hypothetical protein Caul_3912 4229907 - 4229638 - | uncharacterized phage protein TERM 2775 4230015 - 4229995 - R 77 -12.5 -3.57144 | overlap 4229996 GGCGTGATCGCGAAA GCCTCCCCC CGT GGGGGAGGT GTCGGCGAAGCCGAC TERM 2776 4230014 - 4229996 - R 81 -16 -2.74144 | overlap 4229995 GCGTGATCGCGAAAG CCTCCCCC CGT GGGGGAGG TGTCGGCGAAGCCGA Caul_3913 4231292 - 4230066 - | HK97 family phage major capsid protein TERM 2777 4231252 - 4231277 + g 75 -8.9 -4.15201 | gap 1 TCGTGCAGCGCCGCG CGGGCCTCCGGC GAA GCC-GCGGCCTG TTTGGTTTCCTTCAT TERM 2778 4231336 - 4231314 - R 77 -13.5 -3.32769 | overlap 4231335 CTCCGAAAGGATGAA CCTTCTCCC CTTGC GGGAGAAGG AGGGACCCGCCGGCC Caul_3914 4231878 - 4231459 - | HK97 family phage prohead protease Caul_3915 4232263 - 4232021 - | hypothetical protein Caul_3916 4233551 - 4232397 - | HK97 family phage portal protein TERM 2779 4234045 - 4234067 + G 91 -14.8 -3.83502 | ACCGGCCCTTCGGGC CACCTCCCCC ACA GGGGGAGGCG TTTGATATCGGAATG Caul_3917 4233672 - 4234136 + | hypothetical protein Caul_3918 4235457 - 4234138 - | hypothetical protein TERM 2780 4235576 - 4235615 + H 71 -9.3 -3.7732 | gap 3, overlap 4235594 CTCCTTCAGGGCGCT GCT-GACG-CGGCGGCTGGC CAG GCCGG-CGCCGGCGACCAGC TTGTTCATCTCGGCG TERM 2781 4235941 - 4235976 + H 83 -9.6 -4.28254 | overlap 4235942 4235966 GCTCATCGATGGAGC GCTGACGTCCGCTCGC CGCC GCTGGCGGGTGTCAGG TTTTGCCTGTTACGC TERM 2782 4235942 - 4235975 + H 73 -13.1 -3.1647 | overlap 4235941 4235966 CTCATCGATGGAGCG CTGACGTCCGCTCGC CGCC GCTGGCGGGTGTCAG GTTTTGCCTGTTACG Caul_3919 4236069 - 4236632 + | hypothetical protein Caul_3920 4237264 - 4236776 - | hypothetical protein Caul_3921 4237332 - 4239470 + | 1A family penicillin-binding protein TERM 2783 4241127 - 4241087 - g 77 -15.4 -3.21684 | opp_overlap 4241086 4241087, overlap 4241085 4241078 4241088 4241120 4241121 GCAGAAGGATGAAGA CGGCAACGTGATGGGCGC CTACT GCGCCCAGAACGTCGCCA ATTTCGGCGACATCC TERM 2784 4241126 - 4241088 - g 73 -16.7 -2.52529 | opp_overlap 4241087 4241086, overlap 4241087 4241085 4241078 4241120 4241121 CAGAAGGATGAAGAC GGCAACGTGATGGGCGC CTACT GCGCCCAGAACGTCGCC AATTTCGGCGACATC Caul_3922 4240152 - 4242998 + | TonB-dependent receptor TERM 2785 4243075 - 4243052 - f 86 -15.2 -3.58343 | opp_overlap 4243052 CCGATGAGGTGGAAA GGGGTCGCCC GAAA GGGCGGCCCC TTTTTCTATTGCGGG TERM 2786 4243052 - 4243075 + F 100 -17.4 -5.0916 | opp_overlap 4243052 CCGATGAGGTGGAAA GGGGTCGCCC GAAA GGGCGGCCCC TTTTTCTATTGCGGG TERM 2787 4243975 - 4243943 - g 75 -6.2 -4.48987 | gap 2 GCTGGAGAAGGAAAA CGCCTG-GCTGG-CGC GCG GCGTCCAGGGCCGGCG GGCTCGCAACGAAGG Caul_3923 4243251 - 4245083 + | ABC transporter related TERM 2788 4245245 - 4245258 + F 76 -8.1 -4.19238 | AAGTGGCGCTTCCGC CGCGA ATTG TCGCG TTTTCGACTTAGGAA Caul_3924 4245340 - 4245549 + | hypothetical protein TERM 2789 4245570 - 4245593 + F 74 -5.1 -4.61231 | opp_overlap 4245570 GCGCCGACGCAACCA GGCCGCCTC TCCCCC GCGACGGCC TTTTTCGCCCTCTAG Caul_3925 4245641 - 4246573 + | hypothetical protein Caul_3926 4248547 - 4246622 - | K potassium transporter TERM 2790 4247088 - 4247057 - G 72 -13.6 -3.16683 | ATCGGAGGTCAGGAA GATCGCCGTGCCGG ACAC CCGGAACGGCGGCC GGGCGGTCAGGCTGG Caul_3927 4248728 - 4248928 + | hypothetical protein Caul_3928 4249598 - 4250503 + | hypothetical protein Caul_3929 4251173 - 4250541 - | TetR family transcriptional regulator TERM 2791 4251337 - 4251394 + H 91 -17.8 -3.23274 | gap 2, opp_overlap 4251344 GGACGAGCGCGCAGC GCGAAGATCCGGGACCGACGCGTGAACG TCGG CGCTT-C-CGGCGGTCCCGGATCTGCGC TTCGCTTGTCCGGGA TERM 2792 4251473 - 4251529 + G 73 -12.9 -3.53012 | opp_overlap 4251458 CCCCCGCCGCGCCGC CCCCGCCCCAGG-CGGTGGAGGCCG TCGCCGTCT CGGCC-CCGCGGGCCAGCGGCGGGG TTTCGGCCACCGGGA Caul_3930 4251421 - 4252479 + | RND family efflux transporter MFP subunit Caul_3931 4252718 - 4255798 + | acriflavin resistance protein Caul_3932 4256597 - 4256058 - | TetR family transcriptional regulator Caul_3933 4256709 - 4257353 + | glutathione S-transferase domain-containing protein TERM 2793 4257380 - 4257360 - f 73 -12.5 -3.12351 | CCGGCTTAGATCCAA GCCTCCCCC TGT GGGGGAGGT GTCGGCGAAGCCGAC Caul_3934 4257557 - 4259206 + | FAD dependent oxidoreductase Caul_3935 4259376 - 4260533 + | Rieske (2Fe-2S) domain-containing protein TERM 2794 4260627 - 4260651 + F 71 -12.8 -3.05816 | opp_overlap 4260628 TGTCACCCCCACCCA ACCCTCCCCC ATCGA GGGGGAGGGC TTCGGTAGACGCTCA TERM 2795 4260650 - 4260628 - f 84 -16.3 -3.06183 | opp_overlap 4260627 GTCACCCCCACCCAA CCCTCCCCC ATCGA GGGGGAGGG CTTCGGTAGACGCTC Caul_3936 4260678 - 4261271 + | TetR family transcriptional regulator Caul_3937 4261268 - 4261801 + | GCN5-related N-acetyltransferase Caul_3938 4262037 - 4261798 - | hypothetical protein TERM 2796 4262300 - 4262275 - R 100 -10.5 -5.46706 | opp_overlap 4262280 ATGCGAAAATAAAAA CTAGAGCATCG CGTG CGATTCTCTAG TGGCGCCAGGCCAGC Caul_3939 4262482 - 4262297 - | hypothetical protein Caul_3940 4263923 - 4262541 - | amino acid permease-associated region TERM 2797 4264069 - 4264113 + r 100 -21.6 -5.09259 | opp_overlap 4264079 GGGGTTTTCGCGGGT CCTAGAGCAAGCCACGCGAT GTCGG ATCGCACGGCTTGCTCTAGG TTTTGTTTTCGCATC Caul_3941 4266548 - 4264170 - | TonB-dependent receptor Caul_3942 4268696 - 4266675 - | sulfotransferase TERM 2798 4267478 - 4267428 - G 77 -15.3 -3.21416 | gap 1, overlap 4267431 4267475 CAGGCCCAGGATGAA GATCGGGTCG-GGCGCGGGGCAGC CCTG GCCGGCCCGCGCCGCGAACAGGTC CGCCGTCAGGACCGC Caul_3943 4270162 - 4268876 - | FAD dependent oxidoreductase TERM 2799 4270045 - 4270079 + g 83 -20 -2.73875 | overlap 4270042 CGCCCAAGCCGGTAT AGCCCGCGCCGACG ATGCAGA CGTCGGCGCGGGCG TCGTGTTCCAGGGCG Caul_3944 4271701 - 4270301 - | glutamate--putrescine ligase Caul_3945 4271736 - 4271984 + | hypothetical protein Caul_3946 4273488 - 4272088 - | putative aminotransferase Caul_3947 4274391 - 4273606 - | peptidase C26 Caul_3948 4275679 - 4274546 - | spermidine/putrescine ABC transporter ATPase subunit Caul_3949 4276672 - 4275809 - | ornithine carbamoyltransferase TERM 2800 4276783 - 4276819 + r 77 -13.6 -3.37796 | overlap 4276804 CGTAGTCACCCCCGC CCCTGGCCCCTCCCCC ATCGA GGGGGAGGGGAAATGG TTGTCGCTCATGCCC Caul_3950 4277714 - 4276827 - | binding-protein-dependent transport systems inner membrane component TERM 2801 4277674 - 4277640 - G 78 -12 -3.75024 | opp_overlap 4277664, overlap 4277642 CGGGACCAGGAAGAA CAGCACCAGCCACACC AGC GGCGCGGCCAGCGCGG TGGCGAAGACCGACT TERM 2802 4277672 - 4277642 - G 76 -13.2 -3.45742 | opp_overlap 4277664, overlap 4277640 GGACCAGGAAGAACA GCACCAGCCACACC AGC GGCGCGGCCAGCGC GGTGGCGAAGACCGA TERM 2803 4277780 - 4277739 - R 74 -5.2 -4.62069 | gap 3, opp_overlap 4277769, overlap 4277740 4277741 4277757 4277762 CCTTCATCCCAAAAA GGCTGTCATCCCGGACAAGCG AAG CGCCGATCCGGGAT--C-GCC GGAAGCGCCGCGCTC TERM 2804 4277818 - 4277762 - R 80 -14.9 -3.23274 | opp_overlap 4277769, overlap 4277739 4277741 4277740 4277757 TCCCGGACAAGCGAA GCGCCGATCCGGGATCGCCGGAAGCGC CGC GCTCTGGCGTCGGTCCCGGATCTTCGC GCTGCGCGCTCGTCC TERM 2805 4277769 - 4277811 + r 75 -14 -3.04144 | opp_overlap 4277739 4277741 4277740 4277757 4277762 CAAGCGAAGCGCCGA TCCGGGATCGCCGGAAGCGC CGC GCTCTGGCGTCGGTCCCGGA TCTTCGCGCTGCGCG Caul_3951 4278960 - 4277860 - | extracellular solute-binding protein TERM 2806 4279042 - 4279013 - R 79 -11.4 -3.88291 | gap 1, overlap 4279014 GATGATGCCTATAAA GCTCCCCTCCCCC TTGAT GGGGGAGGGGT-C GGGGGTGGGGGTGAC Caul_3952 4280569 - 4279190 - | glutamine synthetase catalytic region Caul_3953 4282124 - 4280757 - | aminotransferase Caul_3954 4283760 - 4282315 - | succinic semialdehyde dehydrogenase Caul_3955 4285253 - 4283766 - | aldehyde dehydrogenase TERM 2807 4283911 - 4283946 + g 74 -14.1 -3.28416 | opp_overlap 4283909 4283904 TTAATCCACACCAGG CCG-GCCTTCAGCCGCC GCGC GGCGG-TGAGGGCGCGG TTGATGTCGCTGGTC TERM 2808 4285392 - 4285448 + r 84 -16.4 -3.05844 | gap 1 GGTGGCGCGGCGCGC AGCGGCGCGACGGAGGGGGCGTCCAGC GGCG GCCCG-CGCCCCCTCCGTCACGATGCG TATTCGCATCGCGCC Caul_3956 4286177 - 4285497 - | GntR family transcriptional regulator Caul_3957 4286353 - 4287687 + | beta alanine--pyruvate transaminase TERM 2809 4287803 - 4287753 - f 74 -10.3 -3.77806 | gap 2, overlap 4287751 CGGGAGAGGAAAAGA TCGACGCCGCATCCTCCTCACCCGC ATC GCGGGGGAGGTGG-CGCGCTG-CGA ATACGCAGCGTGACG Caul_3958 4287848 - 4288279 + | hypothetical protein Caul_3959 4288328 - 4289107 + | peptidase M50 Caul_3960 4290207 - 4289104 - | methyl-accepting chemotaxis sensory transducer TERM 2810 4290627 - 4290644 + H 77 -14.1 -3.30124 | overlap 4290579 4290578 CGGTCCCGGATCTGT GCCCGGC TTTC GCCGGGC TTGTCCGGGATGACA Caul_3961 4290654 - 4291919 + | chorismate synthase TERM 2811 4291942 - 4291922 - T 71 -13.3 -3.04144 | overlap 4291940 GCGGCAGGGCTAAGA CCCTCTCCC GCC GGGAAAGGG TGACCCCAAGCCTAC Caul_3962 4292166 - 4291954 - | hypothetical protein TERM 2812 4292333 - 4292353 + H 79 -9.7 -4.11216 | TGGCCGAAGCTTCGC CGTGTTCGT TCA ACGAACCCG TTTTCCGACTGAAAA Caul_3963 4292503 - 4293009 + | response regulator receiver protein TERM 2813 4293020 - 4293052 + F 80 -16.3 -2.62184 | opp_overlap 4293020 4293048, overlap 4292998 CTTGAGTCTCAAGAA TCCGCTCTTCCCGGC GAA GGCGGGAAAAGCGGA TCGTGTGGCCGGCCA TERM 2814 4293052 - 4293020 - f 100 -18.5 -3.63515 | opp_overlap 4292998 4293020, overlap 4293048 CTTGAGTCTCAAGAA TCCGCTCTTCCCGGC GAA GGCGGGAAAAGCGGA TCGTGTGGCCGGCCA Caul_3964 4293144 - 4293374 + | hypothetical protein Caul_3965 4293749 - 4293384 - | DGPFAETKE family protein Caul_3966 4294812 - 4293874 - | transposase IS116/IS110/IS902 family protein Caul_3967 4296529 - 4295366 - | hypothetical protein TERM 2815 4295911 - 4295901 - G 72 -5.4 -4.41348 | TCGCGCTCAAAGAAA TCCT GCC AGGA AGCCTCGCTCCAATT TERM 2816 4296582 - 4296564 - R 70 -7.4 -4.08064 | opp_overlap 4296566 AAGCTTGGCTGAAAA GCGCTG GTGTTCG CAGCGC CAGCTTTCCGCGCTG Caul_3968 4298188 - 4296608 - | integral membrane sensor signal transduction histidine kinase TERM 2817 4298011 - 4298054 + g 73 -12.5 -3.4252 | TCGCCGCCAGGGCCG CGCCCTGGCTG-GCCAGCTCG GCCT CGGTCTGGCGCA-CCAGGGTG TTCTCGTAGGTGCGC Caul_3969 4298916 - 4298185 - | two component transcriptional regulator TERM 2818 4299020 - 4299000 - R 100 -16.9 -4.2349 | GGTGCAGAGCCAAAA CCCTCTCCC GCT GGGAGAGGG TTCAAGAAGAGCCTA Caul_3970 4300049 - 4299033 - | AraC family transcriptional regulator TERM 2819 4300370 - 4300395 + r 100 -18.3 -5.06414 | opp_overlap 4300370 4300367 4300366 GGGGAATCAAACTGA GGGCGGGCCTT GGGG GAGGCCCGCCC TTTTTATTGGCCGCC TERM 2820 4300395 - 4300370 - R 84 -17.6 -2.70979 | opp_overlap 4300370, overlap 4300367 4300366 GGGGAATCAAACTGA GGGCGGGCCT TGGGGG AGGCCCGCCC TTTTTATTGGCCGCC Caul_3971 4301366 - 4300434 - | galactose 1-dehydrogenase Caul_3972 4303875 - 4301584 - | glycoside hydrolase family 3 protein Caul_3973 4303991 - 4304221 + | hypothetical protein Caul_3974 4305251 - 4304358 - | hypothetical protein Caul_3975 4307012 - 4305420 - | acyl-CoA synthetase TERM 2821 4307150 - 4307112 - R 76 -7.3 -4.34402 | gap 2, opp_overlap 4307123 CGGGCTAGAGGAAAA CGCGCGTCTCG--CCGGTC GGA GGCCGGTTCGTGACGCCCG GTTCGGCTAGGTCTT Caul_3976 4307615 - 4307157 - | hypothetical protein TERM 2822 4307691 - 4307665 - R 100 -21.6 -5.03314 | GCCATCCTGAAAAAA GGCCGGCTCCGC GAG GCGAAGCCGGCC CCTCCGGACACTGGA Caul_3977 4308014 - 4307715 - | outer membrane protein Caul_3978 4308206 - 4309939 + | signal transduction histidine kinase Caul_3979 4310089 - 4310790 + | isochorismatase hydrolase Caul_3980 4310914 - 4311303 + | endoribonuclease L-PSP Caul_3981 4311303 - 4312109 + | alpha/beta hydrolase fold Caul_3982 4312263 - 4313327 + | luciferase family protein TERM 2823 4313427 - 4313402 - T 82 -11.1 -4.07687 | gap 1, overlap 4313403 AGCCGCGCCGTAAAA GGCTCCGCCCCC TGT GGGGGCGGA-CA GACCGCGAAGCGGTC TERM 2824 4313426 - 4313403 - T 78 -14.6 -3.04398 | gap 1, overlap 4313402 GCCGCGCCGTAAAAG GCTCCGCCCCC TGT GGGGGCGGA-C AGACCGCGAAGCGGT Caul_3983 4313989 - 4313480 - | peptidylprolyl isomerase FKBP-type Caul_3984 4314147 - 4314722 + | TetR family transcriptional regulator Caul_3985 4314749 - 4315804 + | NAD-dependent epimerase/dehydratase TERM 2825 4315894 - 4315921 + T 71 -14 -2.67245 | opp_overlap 4315895, overlap 4315880 4315893 TGACGGCCAACAAAA AGGCCGCCTGCG TTTC CGCCGGCGGCCC CTTCATTATCCGTGG TERM 2826 4315920 - 4315895 - T 100 -17.5 -5.07486 | opp_overlap 4315880 4315894 4315893 GACGGCCAACAAAAA GGCCGCCTGCG TTTC CGCCGGCGGCC CCTTCATTATCCGTG Caul_3986 4317880 - 4315946 - | peptidase M61 domain-containing protein Caul_3987 4318461 - 4318093 - | response regulator receiver protein TERM 2827 4318238 - 4318267 + g 72 -13.5 -3.16564 | gap 1, overlap 4318253 GCCAGCAGCACGGCC GTCCGCGCGCC-CC GGC GGCGGCGCGTGGCC TTGATCAACTCGCCG Caul_3988 4318636 - 4319322 + | PepSY-associated TM helix domain-containing protein Caul_3989 4319334 - 4319864 + | hypothetical protein Caul_3990 4319894 - 4320781 + | hypothetical protein Caul_3991 4321004 - 4322029 + | ApbE family lipoprotein Caul_3992 4322026 - 4323591 + | flavodoxin/nitric oxide synthase Caul_3993 4324191 - 4323634 - | hypothetical protein Caul_3994 4324774 - 4324196 - | hypothetical protein TERM 2828 4324484 - 4324464 - G 71 -11.1 -3.60296 | TAGGTCGAGGCGAAA TGGCCATGG GTC CCCTGGCCA TTGCCGAAGTACGAC Caul_3995 4324861 - 4325919 + | LacI family transcription regulator Caul_3996 4326889 - 4325933 - | transposase IS116/IS110/IS902 family protein TERM 2829 4327114 - 4327092 - R 72 -12 -3.38118 | opp_overlap 4327081 4327086 4327087 4327092, overlap 4327076 4327081 ACAAGGGATGGAGAA CCCTTCTCTC TAT GAGAGAGGGG TTTTCAAGTCCAATA TERM 2830 4327092 - 4327114 + r 100 -14.2 -4.14243 | opp_overlap 4327076 4327081 4327092, overlap 4327081 4327086 4327087 ACAAGGGATGGAGAA CCCTTCTCTC TAT GAGAGAGGGG TTTTCAAGTCCAATA Caul_3997 4327937 - 4327101 - | XRE family transcriptional regulator Caul_3998 4328036 - 4328926 + | NAD-dependent epimerase/dehydratase Caul_3999 4329440 - 4329063 - | hypothetical protein Caul_4000 4329641 - 4330792 + | hypothetical protein Caul_4001 4330789 - 4331568 + | short-chain dehydrogenase/reductase SDR TERM 2831 4331640 - 4331619 - f 75 -4.4 -4.6902 | overlap 4331638 4331639 GCACAAGGCCAAAAA CGGTTGTC ATCCCG GACAAGCG CGCGGCGTGAAGATC Caul_4002 4331795 - 4332676 + | SMP-30/gluconolaconase/LRE domain-containing protein Caul_4003 4332663 - 4334456 + | dihydroxy-acid dehydratase TERM 2832 4334491 - 4334464 - T 73 -12.6 -3.22476 | opp_overlap 4334466, overlap 4334465 ATCACTGACGATCAA GCGGCCCCCGGA GCGA TCCGGGGGCCTT TTGGTTTGGGACCGT TERM 2833 4334490 - 4334465 - T 79 -16.1 -2.53164 | opp_overlap 4334466, overlap 4334464 TCACTGACGATCAAG CGGCCCCCGGA GCGA TCCGGGGGCCT TTTGGTTTGGGACCG TERM 2834 4334466 - 4334489 + T 100 -19.6 -4.54727 | opp_overlap 4334465 4334464 CACTGACGATCAAGC GGCCCCCGGA GCGA TCCGGGGGCC TTTTGGTTTGGGACC Caul_4004 4335339 - 4334536 - | gluconate 5-dehydrogenase Caul_4005 4336657 - 4335344 - | glycoside hydrolase family protein Caul_4006 4337406 - 4336693 - | TetR family transcriptional regulator TERM 2835 4337186 - 4337198 + g 70 -9.1 -3.90112 | CGCCGCGCCCAGACC GCCTC GTA GAGGC TTTCCTTGCCGGCGA TERM 2836 4337367 - 4337382 + g 79 -2.4 -4.9448 | overlap 4337349 4337347 CCTTGTGGTTTCGTA CCGGCG GGCG CTCTGG TTTTGTTTGATCGGT Caul_4007 4338706 - 4337537 - | TonB-dependent receptor Caul_4008 4339804 - 4338707 - | TonB-dependent receptor plug Caul_4009 4341127 - 4339907 - | hypothetical protein Caul_4010 4342373 - 4341201 - | acetyl-CoA acetyltransferase Caul_4011 4343269 - 4342373 - | short-chain dehydrogenase/reductase SDR Caul_4012 4344976 - 4343369 - | AMP-dependent synthetase and ligase Caul_4013 4346610 - 4344967 - | carboxylesterase type B TERM 2837 4346592 - 4346551 - G 70 -9.3 -3.85698 | gap 1, overlap 4346552 GGCCTGGGCGACAAA CGGCGTCATCGCCAGGACCG AAA CGGCCAGGGCGACGA-GCCT GGGAGTGAACGAAAT TERM 2838 4348197 - 4348211 + G 71 -2.7 -4.56597 | GGCCCCACCTATGTC GGCGC CGCCA GCGAC TTTTTCCGCGCCAGC Caul_4014 4347030 - 4348346 + | major facilitator transporter TERM 2839 4348350 - 4348369 + T 71 -9.2 -3.72695 | overlap 4348351 GGCGAGGCCTAGGGG GTCCCGCC ACAG GGCGGGAG TTTCCTAGCAGGAGT TERM 2840 4348351 - 4348368 + T 70 -12.7 -2.83403 | overlap 4348350 GCGAGGCCTAGGGGG TCCCGCC ACAG GGCGGGA GTTTCCTAGCAGGAG Caul_4015 4349341 - 4348622 - | TetR family transcriptional regulator TERM 2841 4350675 - 4350642 - g 74 -13.8 -3.27298 | overlap 4350643 CGTGCCAATCACCAA CCCGTTCGCGGCCG AGTTCG CCGCCGCGAACGGC ATCGTCGGCGCCCAG TERM 2842 4350674 - 4350643 - g 77 -17.3 -2.56164 | overlap 4350642 GTGCCAATCACCAAC CCGTTCGCGGCCG AGTTCG CCGCCGCGAACGG CATCGTCGGCGCCCA Caul_4016 4349536 - 4352583 + | TonB-dependent receptor TERM 2843 4352597 - 4352626 + T 89 -12.7 -4.11216 | opp_overlap 4352587, overlap 4352598 AATCACCACCTCGCC CCTGGCGGGCGGC TTCG GCCGCCCGCCGCC TTTTCGCGCTCGGAG TERM 2844 4352598 - 4352625 + T 84 -16.2 -3.06515 | opp_overlap 4352587, overlap 4352597 ATCACCACCTCGCCC CTGGCGGGCGGC TTCG GCCGCCCGCCGC CTTTTCGCGCTCGGA Caul_4017 4353737 - 4352676 - | proline imino-peptidase Caul_4018 4354235 - 4353840 - | hypothetical protein Caul_4019 4354480 - 4354232 - | prevent-host-death family protein TERM 2845 4354558 - 4354529 - H 71 -11.5 -3.50572 | opp_overlap 4354535, overlap 4354535 ACGGATTGGACAGAA TGAAAAGGCGACC GCCA AGCCGCCTCTTCA CCCCGCTTGCGTGCT TERM 2846 4354552 - 4354535 - H 76 -6.9 -4.53034 | opp_overlap 4354535, overlap 4354529 TGGACAGAATGAAAA GGCGACC GCCA AGCCGCC TCTTCACCCCGCTTG TERM 2847 4354746 - 4354778 + G 74 -14.2 -3.37245 | gap 1 AACATGGCCTTCATC GCCGCC-ATCGTGGC CGTC GCCACCATCGGCGGC TTCATGTTCGGCTAC Caul_4020 4354671 - 4356113 + | sugar transporter TERM 2848 4356190 - 4356160 - f 100 -18.3 -4.90002 | opp_overlap 4356162, overlap 4356162 CAAGAGACAATAAAA TACGCCCGGGAGG TTCCG CCTCCCGGGCGTT TTCTTGTGCGGTTCC TERM 2849 4356162 - 4356188 + F 100 -21.6 -4.78839 | opp_overlap 4356160 4356162 AGAGACAATAAAATA CGCCCGGGAGGT TCC GCCTCCCGGGCG TTTTCTTGTGCGGTT TERM 2850 4356188 - 4356162 - f 100 -20.9 -4.04697 | opp_overlap 4356162, overlap 4356160 AGAGACAATAAAATA CGCCCGGGAGG TTCCG CCTCCCGGGCG TTTTCTTGTGCGGTT Caul_4021 4356358 - 4357971 + | glycoside hydrolase family protein TERM 2851 4358705 - 4358659 - g 70 -15 -2.69545 | overlap 4358658 CGCAGAGACGAGAAC GCCCCTGGTCGACCTCAATGCT CGC AGCGCCGCGGTCGCCCAGGCGC TGGGAGCGCTGAAGG Caul_4022 4358135 - 4358968 + | GDSL family lipase Caul_4023 4359841 - 4359113 - | YceI family protein TERM 2852 4359698 - 4359734 + g 78 -13.6 -3.61398 | gap 1 CGGAACCTGGGCGGC GGGCGCGGCGGCCGCCG GGGC TGGCGGC-GCCTCGGCC TTCTTGGCGGCGGGC Caul_4024 4360670 - 4360071 - | TetR family transcriptional regulator TERM 2853 4360476 - 4360494 + g 71 -10.2 -3.79906 | GTCCTGAGCGACGAT GGCGGCGA TGA TCGCCTCC TTGTTCTCGAAATAG Caul_4025 4360859 - 4362010 + | RND family efflux transporter MFP subunit Caul_4026 4362023 - 4365172 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Caul_4027 4365174 - 4366577 + | RND efflux system outer membrane lipoprotein TERM 2854 4366643 - 4366692 + T 70 -10.6 -3.67112 | overlap 4366648 CCCCCCCCCGACGCC GCCAAGCCGAAGGGGCGCGC ATCCCCCCCC GCGCGCCCCTTCACCCTTGC TTCTTCACCTATCCT TERM 2855 4366702 - 4366755 + T 86 -15.4 -3.57263 | gap 1, opp_overlap 4366751, overlap 4366704 CCTTGCTTCTTCACC TATCCTTGTCATCCCGGACCGGCGC CCTGT GCGCTTGTCCGGGATGACA-GCAAA TTTCGCCCTACGGCT TERM 2856 4366704 - 4366754 + T 84 -16.9 -2.74144 | opp_overlap 4366751, overlap 4366702 TTGCTTCTTCACCTA TCCTTGTCATCCCGGACCGGCGC CCTGT GCGCTTGTCCGGGATGACAGCAA ATTTCGCCCTACGGC Caul_4028 4367266 - 4366763 - | hypothetical protein Caul_4029 4367356 - 4367934 + | hypothetical protein TERM 2857 4367935 - 4367968 + T 88 -17.3 -3.10975 | opp_overlap 4367930 GAGGGCAAGATTTAG CCCGCCCGCGCCGGC CTTC GCCGGGATGGGCGGG TCTTGAATCGTCACT Caul_4030 4368110 - 4367979 - | hypothetical protein Caul_4031 4368232 - 4369113 + | LysR family transcriptional regulator Caul_4032 4370170 - 4369277 - | LysR family transcriptional regulator TERM 2858 4370404 - 4370420 + G 74 -13.7 -3.31144 | CCCGGCCAACGTGGG GGTCGCC CAG GGCGACC TTCTCGACATCGACG Caul_4033 4370273 - 4371154 + | NmrA family protein Caul_4034 4371191 - 4371670 + | hypothetical protein TERM 2859 4371712 - 4371678 - T 91 -18.4 -3.21099 | overlap 4371679 GCGCCTGACGACCAA GCCGCGCGGCCGCCTC GAT GGGGCGGCCGCGTGGT CCGGCGACGCTCACC TERM 2860 4371711 - 4371679 - T 100 -21.9 -2.52516 | overlap 4371678 CGCCTGACGACCAAG CCGCGCGGCCGCCTC GAT GGGGCGGCCGCGTGG TCCGGCGACGCTCAC Caul_4035 4373126 - 4371738 - | mannosyl-oligosaccharide 1,2-alpha-mannosidase Caul_4036 4373416 - 4374294 + | 3-hydroxybutyryl-CoA dehydrogenase Caul_4037 4374676 - 4374296 - | PilT domain-containing protein TERM 2861 4374447 - 4374396 - G 71 -11.5 -3.5393 | gap 1 ATCAGCCGGTCGAAA GGGTCC-CCATGCTGTCGAGGCAG CCGTC CGGCCGCGACGGCATGACGGACGC CTATCGGCAGCCATG Caul_4038 4374935 - 4374660 - | hypothetical protein Caul_4039 4376850 - 4374973 - | ferrous iron transport protein B TERM 2862 4376639 - 4376590 - G 70 -12 -3.28712 | gap 2, overlap 4376562 CTGTTCGCCCGACAA GCGGCCG-AGCACCG-CGTCGCGG GTGA CCGCCTCGTCGGGGCTGCGGGCGC GCAGGGAATAGGTGC Caul_4040 4377190 - 4376855 - | FeoA family protein Caul_4041 4377354 - 4377530 + | hypothetical protein Caul_4042 4378039 - 4379298 + | diguanylate phosphodiesterase TERM 2863 4379327 - 4379350 + T 100 -13.8 -5.28176 | opp_overlap 4379306 AGCGTCAGGCCACAG GCCCTCCGGT TCGC GCCGGGGGGC TTTTTTGTGGATCGG Caul_4043 4379711 - 4379316 - | hypothetical protein Caul_4044 4379712 - 4380275 + | GCN5-related N-acetyltransferase TERM 2864 4380313 - 4380282 - T 89 -10.8 -4.25283 | opp_overlap 4380282, overlap 4380283 AGCGTGTGAGGAAAA GCTGGGGACACGCG CGGG CGCGTGTCTCCAAG GTCTTCCGAGATCGA TERM 2865 4380312 - 4380283 - T 80 -14.3 -3.14848 | opp_overlap 4380282, overlap 4380282 GCGTGTGAGGAAAAG CTGGGGACACGCG CGGG CGCGTGTCTCCAA GGTCTTCCGAGATCG Caul_4045 4380675 - 4380331 - | hypothetical protein Caul_4046 4381384 - 4380761 - | glutathione S-transferase domain-containing protein Caul_4047 4381503 - 4382120 + | TetR family transcriptional regulator TERM 2866 4382403 - 4382367 - g 77 -10.8 -3.84451 | gap 2, overlap 4382368 4382371 CTGCTCAAACCCAAA CCGACGACGCGCGCGGGG AGG CCCTGCGC-CGCCG-CGA CCGTGACGCCGAGGG Caul_4048 4382345 - 4383070 + | methylated-DNA--protein-cysteine methyltransferase TERM 2867 4383163 - 4383189 + G 73 -13 -3.53224 | opp_overlap 4383161 ACCTGCGCGAAGATC GCCGGCCTCT ACGACCA GGAGGCCGGC TTTCGCAGCCGGGTG Caul_4049 4383067 - 4383753 + | hypothetical protein TERM 2868 4383881 - 4383831 - f 74 -10.3 -3.78775 | gap 2, overlap 4383832 CGGGTGAGGAGGAAA CCGCGCCGACCTTCTCCTCCCCCGT GCA ACGGGGGAGGTGGCG--CGCCGCGA AGCGGCGTGACGGAG Caul_4050 4383984 - 4384844 + | HAD family hydrolase Caul_4051 4384898 - 4385320 + | dehydratase Caul_4052 4385347 - 4386288 + | riboflavin biosynthesis protein RibF Caul_4053 4386382 - 4386582 + | hypothetical protein Caul_4054 4386833 - 4387927 + | peptidase S1 and S6 chymotrypsin/Hap Caul_4055 4388089 - 4388313 + | hypothetical protein TERM 2869 4388415 - 4388431 + F 84 -15.1 -3.30124 | CGGTCCCGGATCTTC GCCCGGC TTC GCCGGGC TTGTCCGGGATGACA Caul_4056 4388461 - 4388853 + | excinuclease ABC subunit C TERM 2870 4388918 - 4388967 + F 73 -10.8 -3.66178 | gap 3, overlap 4388918 GAAGCGCTGAGTTCA C-GC-GTCGGTCCCGGATCGGCGCG CTG CGCGCTTGTCCGGGAT-GACAGCCG TTTGAGATTGAGGGA TERM 2871 4389129 - 4389071 - f 86 -18.2 -2.60194 | gap 3, overlap 4389070 ACCTCGCGAATTAAC CGCCCGGCGTGACGTCGCCGGACGCTCGC GCCA GCGCGCG-CCGGCC-CATCACGCCGGG-A AGACGACCCCGCACC Caul_4057 4389177 - 4392086 + | isoleucyl-tRNA synthetase TERM 2872 4392755 - 4392740 - g 100 -2.4 -5.52384 | GTCGGAGGAAAAAAA GCTGGG CAAT CCCGAC GGCCATGGGCTTTGA Caul_4058 4392261 - 4392770 + | lipoprotein signal peptidase TERM 2873 4392805 - 4392833 + F 80 -5.2 -4.95806 | opp_overlap 4392805, overlap 4392821 4392822 TGGCGGTGGTGAAAA CCTCGTCCTTCG ACAGG CTCAGGATGAGG TTTTTCTGATGCTTT TERM 2874 4393465 - 4393446 - g 83 -9.2 -4.57073 | overlap 4393457 4393458 GATGTTCTGGAAAAA GGGCGACA AGAC CGCCGCCC CGACCGCTTCGGAGA Caul_4059 4393042 - 4393608 + | hypothetical protein TERM 2875 4393636 - 4393661 + T 100 -16.9 -5.07652 | opp_overlap 4393636 TCGAGATTTGAGGAA GGCCCGGAAGT GAAA GCTTCCGGGCC TTTTCTTTTGCCGCA TERM 2876 4393661 - 4393636 - T 86 -16.2 -3.17763 | opp_overlap 4393636 TCGAGATTTGAGGAA GGCCCGGAAG TGAAAG CTTCCGGGCC TTTTCTTTTGCCGCA Caul_4060 4394751 - 4393807 - | GumN family protein Caul_4061 4395933 - 4394884 - | GumN family protein Caul_4062 4396087 - 4398018 + | DNA mismatch repair protein Caul_4063 4399647 - 4398079 - | hypothetical protein TERM 2877 4399878 - 4399856 - H 100 -9.1 -5.07652 | CGCTTCAAAACAAAA CCCCATCCG CCCTC CGGATGCGG CCACGCCTTAAACCC TERM 2878 4400549 - 4400537 - H 78 -10.5 -4.00532 | overlap 4400530 GGCCGAAAGACGAAA CGCGC CAG GCGCG GGCTGAAATCGCCCG TERM 2879 4400662 - 4400652 - H 73 -8.2 -4.08064 | overlap 4400653 AAGGCTTCTGGAAAA CGCG CCG CGCG GAGCGCCTGTGACGT Caul_4064 4400893 - 4401486 + | GTP cyclohydrolase I Caul_4065 4402785 - 4401532 - | hypothetical protein Caul_4066 4404390 - 4402852 - | adenosine/AMP deaminase Caul_4067 4405724 - 4404471 - | hypothetical protein Caul_4068 4407110 - 4405800 - | hypothetical protein TERM 2880 4406915 - 4406937 + g 87 -17 -3.28712 | GGGCCTGCATCTCGA CCGGGTCGAG ACG CTCGGCCCGG TTGTCGACCAGCACG TERM 2881 4407283 - 4407228 - R 73 -11 -3.66178 | gap 1, overlap 4407266 GGCCGCAACGCGAAA GGCCCG-AACCACGGCCGTTCAGGCGA TTT TCGCGGAAACGGCGGCGGTAGCGCGCC CAATTCCCAGGATCC Caul_4069 4407989 - 4407387 - | hypothetical protein Caul_4070 4408210 - 4409187 + | hypothetical protein TERM 2882 4409370 - 4409352 - f 72 -4.5 -4.64844 | overlap 4409355 TTGACAGATAGAAAA CAGGACG GGAAA CGTCATG GACTTCGAAATCTCC Caul_4071 4409368 - 4410675 + | acyl-CoA dehydrogenase domain-containing protein TERM 2883 4410706 - 4410731 + T 100 -20.5 -5.27335 | opp_overlap 4410702 CGCATTGAAGATGGA GGCCTCCCGGA GCAA TCCGGGAGGCC TTTTTGTTTCGCACA TERM 2884 4410830 - 4410773 - T 84 -16.1 -3.09516 | opp_overlap 4410811 4410827, overlap 4410778 TCCCGGACGAGCGAA GCGAAGATCCGGGACCGGCGCCTGAAC GCAT GCGCTTCCGGCGGTCCCGGATCTGCGC GCTCCGCGCTTGTCC TERM 2885 4410825 - 4410778 - T 70 -11.8 -3.19668 | opp_overlap 4410811, overlap 4410773 GACGAGCGAAGCGAA GATCCGGGACCGGCGCCTGAAC GCAT GCGCTTCCGGCGGTCCCGGATC TGCGCGCTCCGCGCT Caul_4072 4411924 - 4410875 - | aspartate-semialdehyde dehydrogenase TERM 2886 4411980 - 4411999 + H 74 -12.1 -3.49653 | CGGTCTGGGAGAGCG GCCCCGC GCATCG GCGGGGC TTCTGTCCGGGTGGT TERM 2887 4412045 - 4412064 + H 81 -10.6 -4.12188 | GCGCACACCCGCAGA CGCCCCGC CGAA GCGGGTCG TTTTGCGAATAATGG Caul_4073 4412209 - 4413726 + | AraC family transcriptional regulator Caul_4074 4413716 - 4414228 + | methylated-DNA--protein-cysteine methyltransferase TERM 2888 4414268 - 4414215 - f 71 -9.6 -3.72576 | gap 2 TGCTGGCGCATGAAA GGGCAGAGCGCTGA--TCCTTCTCCC TTGC GGGAGAAGGACGTCCCCGCGTTGCCC CGCGCCGCACAACCC Caul_4075 4414319 - 4416082 + | chloride channel core Caul_4076 4417683 - 4416223 - | phosphotransferase domain-containing protein TERM 2889 4417124 - 4417106 - G 71 -10.2 -3.73775 | overlap 4417107 4417110 GTGATGGCGATGAAA TCCAGGCC CTG GGCCTGGG CCGCCTGCACCGTGC TERM 2890 4417744 - 4417716 - R 100 -17.4 -5.00616 | overlap 4417717 GTCTGGGCGAAAAAA CGGGCGGCCGGC GCGAA GCCGACCGCCCA GTCGAGGGGATACAG TERM 2891 4417743 - 4417717 - R 100 -18.7 -3.60048 | overlap 4417716 TCTGGGCGAAAAAAC GGGCGGCCGGC GCGAA GCCGACCGCCC AGTCGAGGGGATACA Caul_4077 4420778 - 4417899 - | cyclic nucleotide-binding protein Caul_4078 4421770 - 4420820 - | anti-FecI sigma factor, FecR Caul_4079 4422315 - 4421734 - | ECF subfamily RNA polymerase sigma-24 factor TERM 2892 4421817 - 4421850 + gH 76 -10.3 -3.91144 | gap 1, overlap 4421796 4421818 CGCCCGCGGCCAGGG C-CTTGGTCAAGAGCC GTA GGCCCTTGGCCAGGTG TTTCTCGACTGTAGA TERM 2893 4421818 - 4421848 + gH 81 -14 -3.54447 | overlap 4421817 GCCCGCGGCCAGGGC CTTGGTCAAGAGCC GTA GGCCCTTGGCCAGG TGTTTCTCGACTGTA TERM 2894 4421894 - 4421915 + gH 78 -5.7 -4.57569 | AACCTAACCGCTATC TGCCCGGGC GATA GGCCGTGCA TTTTTCGCAGGGTGA Caul_4081 4423064 - 4423882 + | glycosyl hydrolase 53 protein Caul_4082 4424137 - 4426851 + | TonB-dependent receptor TERM 2895 4427053 - 4427079 + F 100 -22.4 -5.95539 | opp_overlap 4427031 GATGATCCTGCGACT GGGGAGGAAGCG TCT CGCTTCCTCCCC TTTTTTTCTTTCCGC TERM 2896 4428853 - 4428879 + G 74 -13.7 -3.25823 | gap 1 TGGTGGAGCCACGCG GCCGACCGGCCG TGGG TGGCCGG-CGGC TTCATCTGGACCGGC Caul_4083 4427107 - 4429605 + | glycoside hydrolase family protein TERM 2897 4429607 - 4429648 + T 87 -18.8 -2.62616 | TGACGGTGGGATGAG GGGCTGACGGGGACATGC AGATGC GCATGTCCCCGTCAGCGG TCATCTCCGCCCTAC Caul_4084 4430755 - 4429676 - | branched-chain amino acid aminotransferase Caul_4085 4431226 - 4430858 - | type IV pilus assembly PilZ TERM 2898 4431177 - 4431190 + g 75 -5.2 -4.58395 | overlap 4431176 CGCGTCGCCAGGATG CGCG GATGGG CGCG TTTTTCGACAATGCC Caul_4086 4433761 - 4431428 - | glucan 1,4-alpha-glucosidase TERM 2899 4431549 - 4431575 + g 72 -6.4 -4.36914 | overlap 4431545 GTGGCCGAGTCCGTG CCCTCGCCGC GTTCATA GCCGCGCGGG TTTTGTCCGACGCCG Caul_4087 4435349 - 4433805 - | major facilitator transporter TERM 2900 4434199 - 4434255 + g 79 -15 -3.35679 | gap 2 GCGTGGCTGACCTTG CGGC-TGGTGGCCCGGGC-GATCAGCGG GAT CAGCAGGGCCGCCAGGGCCGCCACGCCG TTATAGATGGCGAAC Caul_4088 4435706 - 4436719 + | LacI family transcription regulator Caul_4089 4438484 - 4436862 - | alpha amylase catalytic region Caul_4090 4440325 - 4438481 - | alpha amylase catalytic region Caul_4091 4440617 - 4443376 + | outer membrane insertion C-terminal signal TERM 2901 4443394 - 4443417 + F 100 -16.7 -5.61881 | ACTTCCCCTGCAACT CCCCGCCGG CTCCAA CCGGCGGGG TTTTTCTTTTTGAGA Caul_4092 4443489 - 4444982 + | tryptophan halogenase Caul_4093 4446744 - 4445200 - | outer membrane efflux protein Caul_4094 4446890 - 4447570 + | ABC transporter related TERM 2902 4447658 - 4447687 + G 70 -12.9 -3.34233 | gap 1 CGCTCGCCAGTCTCC GCGCCCAGGGCC AGCGCTC GGCCCTGG-CGC TTCTCGGCATTCTGA Caul_4095 4447567 - 4448787 + | hypothetical protein Caul_4096 4448853 - 4450148 + | secretion protein HlyD family protein TERM 2903 4450190 - 4450165 - T 100 -14.7 -4.7497 | overlap 4450166 CCGACGCACGAAAAA GCCCTGGCGAC CGAA GTCGCCAGGGT CGAGGGGGAGCGCTC TERM 2904 4450189 - 4450166 - T 95 -18.2 -3.445 | overlap 4450165 CGACGCACGAAAAAG CCCTGGCGAC CGAA GTCGCCAGGG TCGAGGGGGAGCGCT Caul_4097 4450705 - 4450250 - | putative activator of alkane oxidation TERM 2905 4451520 - 4451495 - R 100 -14.7 -5.1861 | overlap 4451496 CCGAGCACGAAAAAA GCCCTGGCGAC CGAA GTCGCCAGGGT CGAGGGGAGCGCTCG TERM 2906 4451519 - 4451496 - R 100 -18.2 -3.70443 | overlap 4451495 CGAGCACGAAAAAAG CCCTGGCGAC CGAA GTCGCCAGGG TCGAGGGGAGCGCTC Caul_4098 4452037 - 4451579 - | hypothetical protein Caul_4099 4452827 - 4452285 - | ECF subfamily RNA polymerase sigma-24 factor TERM 2907 4452845 - 4452889 + r 100 -17.8 -3.65529 | gap 1, opp_overlap 4452836 4452854 GACGAACTCCCGACA CGGCAAGGACCGCCCGCCCGG ACCT CCGGGCGGGCG-TCGATGCGG TTTGGATCAGAATCT TERM 2908 4452881 - 4452854 - R 90 -19.8 -2.74563 | opp_overlap 4452845 CCGACACGGCAAGGA CCGCCCGCCCGG ACCT CCGGGCGGGCGT CGATGCGGTTTGGAT Caul_4100 4455853 - 4452896 - | TonB-dependent receptor Caul_4101 4456628 - 4456014 - | TetR family transcriptional regulator Caul_4102 4457382 - 4456768 - | TetR family transcriptional regulator TERM 2909 4457437 - 4457468 + H 73 -10.8 -3.61517 | overlap 4457409 4457408 ATATATTCCGCGTTC GACGGCTTTTCCGA GTGC TCGGAACGGCCGCC TTATTGACAGGCAGT TERM 2910 4458400 - 4458416 + G 81 -4.3 -4.81685 | overlap 4458396 4458402 CCGGGCATGTTGCGC CAGGTGC TGG GCGCCTA TTTTTCATACTTCCT Caul_4103 4457671 - 4458528 + | FF domain-containing protein Caul_4104 4458525 - 4458950 + | hypothetical protein TERM 2911 4459051 - 4459008 - T 100 -12.4 -5.46706 | opp_overlap 4459007, overlap 4459009 4459011 ATGCGAAAACAAAAA CTAGAGCGAGCCGCGCAA TTCCCATG TCGCGCGGCTCGCTCCCT CTGGCTTGGCTCGCG TERM 2912 4459050 - 4459009 - T 91 -15.9 -3.86397 | opp_overlap 4459007, overlap 4459008 4459011 TGCGAAAACAAAAAC TAGAGCGAGCCGCGCAA TTCCCATG TCGCGCGGCTCGCTCCC TCTGGCTTGGCTCGC TERM 2913 4459048 - 4459011 - T 100 -20.7 -3.50051 | opp_overlap 4459007, overlap 4459009 4459008 CGAAAACAAAAACTA GAGCGAGCCGCGCAA TTCCCATG TCGCGCGGCTCGCTC CCTCTGGCTTGGCTC Caul_4105 4459796 - 4459107 - | hypothetical protein Caul_4106 4462282 - 4459880 - | filamentous haemagglutinin outer membrane protein TERM 2914 4461269 - 4461233 - G 74 -16.6 -2.77899 | gap 1, overlap 4461230 4461235 CGGCTCTATCAACCA GATCCCCGCGAC-GCCC GTCG GGGCGGCCGCGGTGATC CCCGCCGTGGAGGCG Caul_4107 4463999 - 4462335 - | polypeptide-transport-associated domain-containing protein TERM 2915 4464218 - 4464246 + H 93 -8.2 -5.04601 | opp_overlap 4464218 4464216 CAAGCCTGTAAAATA GGGAACGGCTAA CGGCC TTATTCGTTCCC TTTTTGATTTCTCGA TERM 2916 4464571 - 4464561 - H 71 -8.2 -3.92996 | CTCGACAGACAACAA CCGC ATG GCGG CCCGGAAGGGACTCG Caul_4108 4464748 - 4466052 + | sodium:dicarboxylate symporter Caul_4109 4466173 - 4467327 + | signal transduction histidine kinase Caul_4110 4467324 - 4467707 + | response regulator receiver protein Caul_4111 4468110 - 4467778 - | glutathione-dependent formaldehyde-activating GFA TERM 2917 4468213 - 4468238 + r 100 -21.9 -4.55287 | opp_overlap 4468213 ACGGAACACGAAAAA CGCCCCCGGAC CGAA GTCCGGGGGCG TTTTCTCTAGCTCGG TERM 2918 4468238 - 4468213 - R 100 -21.9 -4.88228 | opp_overlap 4468213 ACGGAACACGAAAAA CGCCCCCGGAC CGAA GTCCGGGGGCG TTTTCTCTAGCTCGG Caul_4112 4468776 - 4468264 - | CarD family transcriptional regulator Caul_4113 4469419 - 4469078 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 2919 4470785 - 4470818 + G 86 -12.4 -4.18018 | CGCTCTGCAGGACCT GCTGCGCCGGCC CATCGAGCAC GGCGGGCGCAGC TTTTCGGTCAGCGCC Caul_4114 4469664 - 4471742 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Caul_4115 4471843 - 4472445 + | hypothetical protein Caul_4116 4472683 - 4473792 + | beta-lactamase-like protein Caul_4117 4474324 - 4474025 - | RNA-binding S4 domain-containing protein Caul_4118 4476876 - 4474321 - | helicase domain-containing protein TERM 2920 4475256 - 4475314 + g 85 -11.4 -4.25104 | GCCGGGCGATCTCCG GGGTGACGGCCCGCTGGGCGGTGTTGCG CAG CGCCTTCTCCTCCAGCGCGCTGCCACCC TTTTCCTGCACGAAG TERM 2921 4477187 - 4477222 + r 95 -16.3 -3.889 | opp_overlap 4477181 4477187 CTTCCCAAATAGTAA TGGGCGTGAACTGCA ATCACA TGCAATTCACGCCCA TTTAATCTACTTCAA TERM 2922 4477222 - 4477187 - R 95 -18.5 -3.45571 | opp_overlap 4477187, overlap 4477181 CTTCCCAAATAGTAA TGGGCGTGAACTGCA ATCACA TGCAATTCACGCCCA TTTAATCTACTTCAA Caul_4119 4477669 - 4477280 - | hypothetical protein Caul_4120 4478179 - 4478045 - | transposase, IS4 family protein TERM 2923 4478086 - 4478118 + g 82 -8.6 -4.40572 | gap 1, opp_overlap 4478093 TGAGCTGGACCGAGG CCATGAAGAGC-CAA GCAG TTGAGCTCTTGATGG TTTTCTCGAAGTTCT Caul_4121 4478736 - 4479866 + | acyltransferase 3 Caul_4122 4480466 - 4479948 - | hypothetical protein Caul_4123 4480603 - 4480842 + | VapB family protein Caul_4124 4480839 - 4481225 + | PilT domain-containing protein Caul_4125 4482990 - 4481356 - | amidohydrolase 3 Caul_4126 4483246 - 4483818 + | methylated-DNA--protein-cysteine methyltransferase Caul_4127 4484419 - 4483973 - | hypothetical protein TERM 2924 4484104 - 4484117 + g 73 -9.5 -3.8211 | CGTTGGCGGTCACCG GGGCC ACGC GGCCC TTCTTGTCGGTCCAG Caul_4128 4484638 - 4484943 + | ribosomal protein L28 TERM 2925 4484998 - 4484973 - f 100 -21.9 -3.91084 | opp_overlap 4484973 CCAGGCTGAACGAAA GGCCCGCGAGG TTCG CCTCGCGGGCC TTTTCGCGTCTGGAC TERM 2926 4484973 - 4484998 + F 100 -21.9 -4.16943 | opp_overlap 4484973 CCAGGCTGAACGAAA GGCCCGCGAGG TTCG CCTCGCGGGCC TTTTCGCGTCTGGAC TERM 2927 4485121 - 4485083 - f 71 -9.5 -3.7795 | gap 1, opp_overlap 4485083, overlap 4485074 GGAAAGCGCACGAAA CCCCGTGCTG-ACGGTTG GAAC CAACCGCGCCGCCCGAGG CTTTCTCTCCCACTT Caul_4129 4485152 - 4485505 + | hypothetical protein Caul_4130 4485508 - 4486224 + | hypothetical protein Caul_4131 4486467 - 4486243 - | hypothetical protein TERM 2928 4486570 - 4486546 - R 78 -2.8 -5.0133 | opp_overlap 4486551, overlap 4486547 4486549 GATGGCTTCAAAAAA TGAGATTGCG TCCTT CGCAATCTTG CCCGCCAAGCTCAGC Caul_4132 4487297 - 4486776 - | hypothetical protein TERM 2929 4487147 - 4487181 + g 85 -10.9 -4.28361 | overlap 4487150 TGTAGGCAGCATCAT GGGTTTCGAGAACTC TCATT GAGTTTTCGAAATTC TTTTGGTCAAGTTCG TERM 2930 4487150 - 4487178 + g 85 -11.2 -4.25658 | overlap 4487147 AGGCAGCATCATGGG TTTCGAGAACTC TCATT GAGTTTTCGAAA TTCTTTTGGTCAAGT Caul_4133 4487527 - 4487294 - | hypothetical protein TERM 2931 4487874 - 4487853 - R 74 -5.1 -4.57837 | gap 1, overlap 4487841 4487855 AGACGGCTGCAAAAA TTCGGCAGCG GTA CG-TGCCGGA TTGGACCGCTGGCCA Caul_4134 4489100 - 4488096 - | putative transposase TERM 2932 4488130 - 4488170 + g 71 -11 -3.54424 | gap 1 TCGCCTCGACGGCCC GCCGATGCGCTGGACGCGG GTGC CCGTG-CCGGAGCGCCGGC TTTCCGCCGCTGCCA TERM 2933 4489250 - 4489235 - H 88 -7.6 -4.8622 | overlap 4489243 TTTGTCAATCAAAAA GCATCA TATA TGATGC TATAGCTCCATAGGA Caul_4135 4489267 - 4489563 + | hypothetical protein Caul_4136 4489780 - 4489544 - | XRE family transcriptional regulator Caul_4137 4489840 - 4490403 + | hypothetical protein TERM 2934 4490650 - 4490677 + F 73 -11.2 -3.56568 | GATCGTAGCTGCCGT TGCCTCGCTCGG ATCG CTGGGCGCGGCA TTTGCAACCTACTTG TERM 2935 4492274 - 4492260 - g 86 -6.4 -5.04385 | overlap 4492262 GATACTGTGAAAAAA TACCTG ATT CAGGCA GCAACCCGCCCAGGT Caul_4138 4491471 - 4492295 + | hypothetical protein TERM 2936 4492337 - 4492315 - T 74 -2.5 -4.91109 | opp_overlap 4492316 4492335, overlap 4492316 TCGTCAGCATAAAAA TGGCCGCCA CTCGC CGGCGGGCG ACCTACTATGACGCG TERM 2937 4492369 - 4492406 + T 70 -10 -3.57561 | opp_overlap 4492374, overlap 4492374 TTCTTGACTTTAAGC CCAAAGCCTTATAGGA TTCTTT TCCTATAAGGCTTCAG TTTCGACGCTTGCGA TERM 2938 4492401 - 4492374 - T 77 -12.9 -3.66654 | opp_overlap 4492374 4492369 GACTTTAAGCCCAAA GCCTTATAGGA TTCTTT TCCTATAAGGC TTCAGTTTCGACGCT TERM 2939 4492374 - 4492401 + T 74 -12.9 -3.27704 | opp_overlap 4492374, overlap 4492369 GACTTTAAGCCCAAA GCCTTATAGGA TTCTTT TCCTATAAGGC TTCAGTTTCGACGCT Caul_4139 4493234 - 4492938 - | hypothetical protein Caul_4140 4494039 - 4493578 - | hypothetical protein TERM 2940 4494205 - 4494164 - R 78 -11.6 -3.75292 | ATCGACGACGAAGAA CGCCGTCG-CGCCCAGTC GTCCACGG GCCTGGGCGGCG-CGGCG CGCGAGGTCTGACCG TERM 2941 4494287 - 4494264 - R 100 -19.6 -4.72272 | opp_overlap 4494264 CGCGTCCACGAAAAA GCCCTCCCCG TCGC CGGGGAGGGC TTTACGATTCAGCGA TERM 2942 4494264 - 4494287 + r 100 -19.6 -3.66178 | opp_overlap 4494264 CGCGTCCACGAAAAA GCCCTCCCCG TCGC CGGGGAGGGC TTTACGATTCAGCGA Caul_4141 4494644 - 4494354 - | hypothetical protein Caul_4142 4495285 - 4494986 - | hypothetical protein TERM 2943 4495536 - 4495480 - R 100 -22.1 -3.23274 | opp_overlap 4495508 4495514 4495515 TCCCGGACAAGCGAA GCGCAGATCCGGGACCGCCGGAAGCGC GGC GCTCAGGCGTCGGTCCCGGATCGGCGC GCTGCGCGCTTGTCC TERM 2944 4495508 - 4495545 + r 88 -16.3 -3.30124 | gap 1, opp_overlap 4495480, overlap 4495514 4495515 ACCGCCGGAAGCGCG GCGCTCAG-GCGTCGGTC CCG GATCGGCGCGCTGCGCGC TTGTCCGGGATGACA TERM 2945 4495514 - 4495564 + r 100 -13.3 -4.50976 | opp_overlap 4495480, overlap 4495508 4495515 GGAAGCGCGGCGCTC AGGC-GTCGGTCCCGGATCGGCGCG CTG CGCGCTTGTCCGGGAT-GACAGCCA TTTTGTCATATACGA TERM 2946 4495515 - 4495563 + r 88 -16.8 -3.30104 | opp_overlap 4495480, overlap 4495508 4495514 GAAGCGCGGCGCTCA GGC-GTCGGTCCCGGATCGGCGCG CTG CGCGCTTGTCCGGGAT-GACAGCC ATTTTGTCATATACG Caul_4143 4496672 - 4495611 - | hypothetical protein Caul_4144 4498612 - 4496669 - | cobalt chelatase, pCobT subunit TERM 2947 4497068 - 4497089 + g 70 -3.7 -4.4078 | gap 1, opp_overlap 4497073, overlap 4497054 4497053 GCGCTGGTGGGCCCA CATC-AGGGC CTC GCCGTCGATG TTTTCCTTCAGCAGC Caul_4145 4498689 - 4498910 + | hypothetical protein Caul_4146 4500228 - 4499065 - | hypothetical protein TERM 2948 4500357 - 4500308 - R 84 -10.8 -4.13767 | gap 3, overlap 4500327 TCCTTCATTCCAAAA CGCCTGTC-ATCCCGGACAAGCGCG CAG CGCGCCGATCCGGGACCGAC-G-CG TGAACGCATGCGCTT TERM 2949 4500364 - 4500327 - R 74 -12.7 -3.30124 | gap 1, overlap 4500308 TGTCATCCCGGACAA GCGCGCAGCGCGCCGATC CGG GACCGACGCG-TGAACGC ATGCGCTTCCGGCGG TERM 2950 4500392 - 4500409 + r 77 -14.1 -3.30124 | overlap 4500382 CGGTCCCGGATCTGC GCCCGGC TTTC GCCGGGC TTGTCCGGGATGACA Caul_4147 4500771 - 4500457 - | hypothetical protein Caul_4148 4500965 - 4500837 - | hypothetical protein Caul_4149 4501327 - 4501094 - | hypothetical protein TERM 2951 4501414 - 4501451 + r 100 -14.1 -4.42806 | opp_overlap 4501421, overlap 4501415 4501421 TCCGAGTTCGCCCAA GGAAAAAGGGCGGGACC TTTC GGTCCCGCCCTCGTTCA TTTCTTTCAGCCTGG TERM 2952 4501415 - 4501450 + r 89 -17.6 -3.25202 | opp_overlap 4501421, overlap 4501414 4501421 CCGAGTTCGCCCAAG GAAAAAGGGCGGGACC TTTC GGTCCCGCCCTCGTTC ATTTCTTTCAGCCTG TERM 2953 4501444 - 4501421 - R 100 -19.6 -4.8622 | opp_overlap 4501415 4501414 4501421 TCGCCCAAGGAAAAA GGGCGGGACC TTTC GGTCCCGCCC TCGTTCATTTCTTTC TERM 2954 4501421 - 4501444 + r 93 -19.6 -2.96061 | opp_overlap 4501421, overlap 4501415 4501414 TCGCCCAAGGAAAAA GGGCGGGACC TTTC GGTCCCGCCC TCGTTCATTTCTTTC Caul_4150 4503128 - 4501482 - | chaperonin GroEL TERM 2955 4501917 - 4501953 + g 70 -3.6 -4.45664 | gap 1, opp_overlap 4501876, overlap 4501919 TTCTTCCACGGCCGC G-CGGGTCGCGTTGAGG GCGT CGTCGACGCGGTCCTTC TTTTCCTTCACTTCG TERM 2956 4501919 - 4501950 + g 85 -10.8 -4.33004 | opp_overlap 4501876, overlap 4501917 CTTCCACGGCCGCGC GGGTCGCGTTGAGG GCGT CGTCGACGCGGTCC TTCTTTTCCTTCACT Caul_4151 4503476 - 4503186 - | co-chaperonin GroES TERM 2957 4503308 - 4503324 + g 76 -13.7 -3.50853 | CGGCCTTCACGTCCA GGGCGAC GAT GTCGCCC TTGTCGTTGCGGGCG Caul_4152 4503698 - 4504096 + | hypothetical protein Caul_4153 4504096 - 4504521 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_4154 4504544 - 4504996 + | hypothetical protein Caul_4155 4505533 - 4505027 - | hypothetical protein Caul_4156 4505874 - 4506554 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 2958 4506979 - 4507009 + F 86 -8.3 -4.56597 | gap 1 TCACACGCCACGATT TCCGGAAGCAT-GC TGCC GCTGGGCTTCCGGA TTTTTGAGGGCAAAG Caul_4157 4507044 - 4508342 + | integrase family protein TERM 2959 4508660 - 4508646 - T 76 -6.4 -4.44797 | opp_overlap 4508646 TTAGGAACACGAAAA TCAGTG CGG CACCGA TAATCTGACCAACAG Caul_4158 4512324 - 4508728 - | YD repeat-containing protein TERM 2960 4509097 - 4509082 - G 72 -6 -4.36914 | overlap 4509083 CGTTGTCCCATAAAA GGGCGC AAGG GCGCCA GTTACACCGCCAACA TERM 2961 4510085 - 4510126 + g 76 -14.4 -3.51825 | gap 1, opp_overlap 4510069, overlap 4510083 CCGAACGAGGCGCTG CGGCCGG-TGGCGGCGTTG TCGGT CACCCCCGCCAGCTGGCCG TTCTCGTTGCGGTCG Caul_4159 4512851 - 4512321 - | putative transposase TERM 2962 4512858 - 4512880 + r 91 -3.3 -5.45726 | gap 1 GAACTTCATCGGGAG GCCGCTC-CG AAGA TGAGCGCGGC TTTTTTTAGGATGTC Caul_4160 4513162 - 4512848 - | transposase IS3/IS911 family protein TERM 2963 4513011 - 4512959 - G 100 -25.6 -2.8547 | gap 1, opp_overlap 4512961 4512985 AGCGGCCAGATCAGA CGGCGACGGGGCCGGCGCTTGCG TGTGGGGG CGCC-GCGCCGGCCCCGTCGCCC GCGTCCCGTATTGGA Caul_4161 4514163 - 4513597 - | RTX toxin-activating protein C Caul_4162 4528227 - 4514164 - | outer membrane adhesin like proteiin TERM 2964 4515047 - 4515010 - G 72 -14.1 -3.15544 | gap 1 GTCGAGCGCCAGGAA GGCGTCGTCCGCGCCGAC CCA GCCGGTGCGGACGAC-CT GGCCGAAGCCAGCGA TERM 2965 4515959 - 4515944 - G 89 -2.4 -5.24531 | overlap 4515945 ATTTCCCACAAAAAA TCGCCG GATC CAGCGG TGTGGCTCGCGCTCA TERM 2966 4516303 - 4516319 + g 77 -10.8 -3.86346 | opp_overlap 4516293 GAACACCCCCGCCCC GCCGGC GCCAG GCCGGC TTTCTAAAACGCTGA TERM 2967 4517775 - 4517809 + g 71 -10.7 -3.65812 | CCTTTTTCGGGGCGC TGGCGATGACGCCGG CCTCC TCGGCGTTGTGGCCA TTATATTCAACGCCA TERM 2968 4520512 - 4520566 + g 80 -17.8 -2.84794 | overlap 4520511 4520514 GAAGGTCTTTTGGCT GGCCGCGCCGTGCTGGTCGGTGACCT GCA AGGTGATCGATTGGATCGGCGCGGTC TCATTGTCCAGTTGA TERM 2969 4520514 - 4520564 + g 78 -16.8 -2.97017 | overlap 4520512 4520511 AGGTCTTTTGGCTGG CCGCGCCGTGCTGGTCGGTGACCT GCA AGGTGATCGATTGGATCGGCGCGG TCTCATTGTCCAGTT TERM 2970 4524015 - 4524040 + g 72 -14 -3.14344 | opp_overlap 4524000 TCTTGTCGGCTCCGT CGGTGCCGAC GATCCA GTCGGCGCCG TTGGTGCCCAGGATC TERM 2971 4525461 - 4525494 + g 85 -10.9 -4.3739 | gap 1, opp_overlap 4525459 TGGCCGCATCGAAGC CGC-CCGCTCCCGCGA GCG TCGCGAGGACGGCGCG TTTTGTCAGCACATC TERM 2972 4527500 - 4527479 - G 73 -10.2 -3.85817 | ATCTTGTCGTAGAAA TTGGCGTC ATCAGG GACGCCAA GCCTCTTGGCCTCGG TERM 2973 4527873 - 4527883 + g 72 -4 -4.64334 | CACCCATATCGCGGC GAAT TTG ATTC TTTTGTTCCGGAGTT TERM 2974 4528044 - 4528070 + g 72 -8.8 -3.98683 | opp_overlap 4528043 4528046 GCTGCATCTGAATAT TATCTGACTTCG AAT CGAAGTCGAATA TTTGCTTACTATCAT Caul_4163 4529000 - 4528224 - | hypothetical protein TERM 2975 4528822 - 4528791 - G 81 -3.1 -5.04987 | gap 2, overlap 4528792 4528819 AATAGCTTGAAAAAA TGAGTCG-TTC-TCG ATTT CGAAGAATCGACTCT CGCCCTTGACGAGCG Caul_4164 4530406 - 4528997 - | HlyD family type I secretion membrane fusion protein Caul_4165 4532583 - 4530403 - | type I secretion system ATPase TERM 2976 4532556 - 4532516 - G 82 -18.1 -3.07291 | overlap 4532503 AAGCAGGTCAGGGAA GGCGCGCCGAGCGGCGCGG CAT CCTCGCCGGCCGCCGCACC GATCAGCAGATCGCC TERM 2977 4532671 - 4532648 - R 74 -10.2 -3.767 | gap 1, opp_overlap 4532663, overlap 4532661 4532662 CACCCAGCCAGCAAA CGCCGCG-CGG AAA CCGGCGCGTCG CCGCGCCTTGTCGAT TERM 2978 4532663 - 4532678 + r 72 -11.8 -3.35798 | opp_overlap 4532648 4532662 4532661 CGCCGCGCGGAAACC GGCGCG TCGC CGCGCC TTGTCGATACACACT TERM 2979 4532842 - 4532819 - R 73 -11 -3.57263 | opp_overlap 4532839, overlap 4532839 AGTCCGAGTTGGAAA GCCGATTGCC AAAC GGAAATCGGC GCGGGAGGGAACGGG Caul_4166 4533459 - 4532986 - | hypothetical protein Caul_4167 4534193 - 4533468 - | hypothetical protein TERM 2980 4534296 - 4534279 - R 74 -4.8 -4.62336 | opp_overlap 4534236 4534263 4534266, overlap 4534236 ACTGCATTTTAAAAA GCAGCC TTTTTG AGCTGC ATTTCGAAAAGAAGC Caul_4168 4535036 - 4534338 - | hypothetical protein Caul_4169 4535410 - 4535039 - | hypothetical protein TERM 2981 4536002 - 4535963 - R 70 -9.8 -3.59979 | gap 1 CCGCCTGACGCCAAA CCCCGCGAC-GCAGCGCAG ACT CCCCGCCGCCGGCGCGGCG CAGATACGGATGCTG Caul_4170 4536443 - 4536096 - | hypothetical protein TERM 2982 4536728 - 4536718 - R 86 -6.8 -5.05782 | overlap 4536719 4536720 AGCTACTGTAAAAAA TGCG CCC CGCA GCGACATGCCAGCGC Caul_4171 4537184 - 4536825 - | hypothetical protein TERM 2983 4537065 - 4537092 + g 76 -7.6 -4.25104 | gap 1, opp_overlap 4537057 4537063 4537064, overlap 4537063 AGAGATAGGCAAAGC CGCGAGCGCTTTC AGC GACTGCGC-CGCG TTTTGATAGCGCGCG TERM 2984 4537223 - 4537191 - R 71 -12.7 -3.10071 | opp_overlap 4537191, overlap 4537180 4537179 AAACGGCACGCAATA GGGACCCCCTATCGG CGC CCAATAGGGACCCCC TTTCCGAGTTCGAGC Caul_4172 4538092 - 4537364 - | IstB ATP binding domain-containing protein Caul_4173 4539587 - 4538079 - | integrase catalytic region Caul_4174 4540401 - 4539670 - | serine/threonine protein kinase TERM 2985 4540201 - 4540216 + g 84 -4.6 -5.08824 | overlap 4540202 GACCACATTTCGGTG GCTCGC CTTG GCGAGG TTTTTTGCCTCGGCC Caul_4175 4540874 - 4540401 - | hypothetical protein TERM 2986 4540647 - 4540664 + g 78 -8.3 -4.36914 | opp_overlap 4540626 GGTAGCGGACCCTTT GCCTGCG ACCG CGCTGGC TTTTATCACCACGGC TERM 2987 4540676 - 4540689 + g 86 -5.9 -4.97158 | TGGCTTTTATCACCA CGGCG TCAA TGCCG TTTTCTTTGATGTAA Caul_4176 4541869 - 4540946 - | hypothetical protein Caul_4177 4542239 - 4541919 - | XRE family transcriptional regulator TERM 2988 4542930 - 4542904 - R 71 -5.1 -4.53303 | gap 1, opp_overlap 4542904 4542905 4542907, overlap 4542905 TACGGCGAGATAAAA GGACA-GGGACC TGAC GGCCCCATGTCG TTGATGGTGCTCAGT TERM 2989 4542951 - 4542980 + r 100 -16.5 -4.62872 | GGTGCTCAGTATTTT TAGGGACCTGCCC TAGA GGTCAGGTCCCTA TTTTTCCGACTTCCT TERM 2990 4543086 - 4543121 + r 84 -15.6 -3.28712 | opp_overlap 4543079 TTGAGAAAGTTCATA TTTCCGGGACCTTG ACTGAAAA CGAGGTCCCGGAAA TTGTCCAACACCACC Caul_4178 4543707 - 4543285 - | hypothetical protein TERM 2991 4543621 - 4543606 - G 71 -2.4 -4.53163 | overlap 4543607 4543608 CCAGACACCAGAAAA CTGCCG GGTT CGGCCA CTGACCCCTCCGTCT Caul_4179 4544711 - 4544433 - | XRE family transcriptional regulator TERM 2992 4544690 - 4544720 + g 82 -13.4 -3.71378 | opp_overlap 4544685 4544690 4544694 TGCTCCACAAGTGAA CGAATTGCGTTGAC TCA GTCACCGTAATTCG TTTGAATGTAGCCTC Caul_4180 4544801 - 4545322 + | hypothetical protein Caul_4181 4545425 - 4545622 + | hypothetical protein TERM 2993 4546127 - 4546114 - g 70 -3.7 -4.45544 | opp_overlap 4546115, overlap 4546115 GGCCATGAAGGAAAA CGCCC GCCA GGGCT TCTGGAATGGCTCAC Caul_4182 4545638 - 4547377 + | resolvase domain-containing protein Caul_4183 4548866 - 4547550 - | xanthine/uracil/vitamin C permease Caul_4184 4549939 - 4548869 - | purine nucleoside permease Caul_4185 4551160 - 4550198 - | ABC transporter related Caul_4186 4551305 - 4551598 + | hypothetical protein Caul_4187 4551608 - 4552045 + | thioesterase superfamily protein Caul_4188 4553203 - 4552217 - | type II secretion system protein TERM 2994 4552370 - 4552382 + g 75 -6.2 -4.41494 | overlap 4552344 CTCGGCGGCTGAGAG CCGC AGGTC GCGG TTTTCCTTGGCCATC Caul_4189 4554192 - 4553215 - | type II secretion system protein Caul_4190 4555710 - 4554196 - | type II secretion system protein E TERM 2995 4555495 - 4555518 + g 71 -10.9 -3.61894 | overlap 4555500 CACGTTGGTGGTCGG CGGCGCGCC CTGGGC GGCGCGCAG TTGTTCCAGGCCGTT Caul_4191 4557301 - 4555715 - | pilus assembly protein CpaE Caul_4192 4558005 - 4557301 - | pilus biogenesis lipoprotein CpaD Caul_4193 4559653 - 4558016 - | type II and III secretion system protein TERM 2996 4559344 - 4559296 - G 70 -12.4 -3.38812 | gap 2, opp_overlap 4559335, overlap 4559294 CGGCGTCGAAGAACA CCGCGTCGG-TC-ACGCCCTGGCC CAT GCCCAGCACGTAGATCCGGCGCGG GCCGCGCAGCACGGC TERM 2997 4559335 - 4559375 + g 72 -13.4 -3.14344 | gap 3, opp_overlap 4559296 4559294 TGCCCAGCACGTAGA TCCGGCGCG-GGCCG-CGC AGCACG GCGTCGGCCACG-GCCGGA TTGGTCACCAGCATG Caul_4194 4560540 - 4559650 - | Flp pilus assembly protein CpaB Caul_4195 4561251 - 4560739 - | peptidase A24A prepilin type IV TERM 2998 4561371 - 4561400 + r 100 -19.3 -4.56597 | opp_overlap 4561374, overlap 4561374 CGACGCGCAAACAAA AAAGGCCCCGGCG TTTC CGCCGGGGCCTTC TTTTTCGAGCGAGCG TERM 2999 4561374 - 4561397 + r 100 -21 -4.40561 | opp_overlap 4561374, overlap 4561371 CGCGCAAACAAAAAA GGCCCCGGCG TTTC CGCCGGGGCC TTCTTTTTCGAGCGA TERM 3000 4561397 - 4561374 - R 100 -21 -5.63517 | opp_overlap 4561371 4561374 CGCGCAAACAAAAAA GGCCCCGGCG TTTC CGCCGGGGCC TTCTTTTTCGAGCGA Caul_4196 4561605 - 4561420 - | Flp/Fap pilin component Caul_4197 4561916 - 4562311 + | hypothetical protein Caul_4198 4562420 - 4562995 + | TadE family protein Caul_4199 4562986 - 4563552 + | hypothetical protein Caul_4200 4564316 - 4563549 - | aminotransferase class IV Caul_4201 4565701 - 4564313 - | para-aminobenzoate synthase component I TERM 3001 4565014 - 4564994 - G 73 -8.1 -4.13728 | overlap 4564985 CAGATAGGCCGAAAA CGGGGCGGG GCT CTCGGCCCG CAGGCGGGCGAACAG TERM 3002 4565207 - 4565254 + g 90 -17.6 -3.53012 | gap 1 GATCGGGGGCGACGG GGCGTCCAGCCAGGCCAGGGCCG CCT CGGCCCGGGCCTGGGC-GAAGCC TTTCGACCCGCCCCG Caul_4202 4567168 - 4565729 - | hypothetical protein Caul_4203 4568047 - 4567274 - | protein tyrosine/serine phosphatase Caul_4204 4568109 - 4568927 + | alpha/beta hydrolase fold TERM 3003 4568950 - 4568986 + T 78 -11.6 -3.73224 | opp_overlap 4568971, overlap 4568948 GTTGAGCGCCCTGCG TGGTCCTCGTCCTTCG ACAAG CTCAGGATGAGGACCA TTTCATAGACCCTGG Caul_4205 4571043 - 4569079 - | 1A family penicillin-binding protein TERM 3004 4570405 - 4570438 + g 71 -11 -3.65046 | gap 1, opp_overlap 4570393, overlap 4570395 CAACCCGGCCAGCAG GGCCGCCTCGCCGAC CGTCA GTT-GCGAGGCGGGC TTGTTGAAATAGCGC TERM 3005 4572168 - 4572141 - g 75 -5.5 -4.57341 | gap 1, overlap 4572142 4572143 4572145 AAGCTGGCCGAAAAA CTGATCGCCGAG GGCAT CCCGGCGCTC-G CCTACCACGCCGGCC Caul_4206 4571343 - 4573229 + | ATP-dependent DNA helicase RecQ Caul_4207 4573329 - 4573637 + | hypothetical protein Caul_4208 4574109 - 4573651 - | hypothetical protein Caul_4209 4576817 - 4574295 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 3006 4574519 - 4574490 - G 70 -12.8 -3.30124 | CGCGATGGTCCAGAA GGCGCGCCGATG CGGGGC CAGCAGCGCGCC CGACGCCGCGGCGTC TERM 3007 4575825 - 4575849 + g 95 -15.7 -4.18762 | opp_overlap 4575810 4575809 CTCGCCCGCTTTGGT CCAGAGGCGGG CGA CCCGCATCTGG TTTTCGGTCAGGGTT Caul_4210 4577687 - 4576845 - | UspA domain-containing protein Caul_4211 4578978 - 4577782 - | RND family efflux transporter MFP subunit TERM 3008 4578355 - 4578387 + g 74 -13.4 -3.36327 | gap 1, opp_overlap 4578349 4578374 GGTGACATAGCCCGA GGCCGGGGCGCTGAC CGAA GCCA-CGCCCTGGCC TTCTCCCTCGGGTCC TERM 3009 4578475 - 4578493 + g 95 -17.4 -3.78934 | GGCGGCGCGGACGCC GGCGCGCG CGG CGCGCGCC TTGTTCTCGACGGCC Caul_4212 4581350 - 4578981 - | hypothetical protein TERM 3010 4580231 - 4580188 - G 72 -15.2 -2.87211 | gap 1 ACCGTCGGGGACAGA GCCACCACGCGCCGGACCGCC GCC AGCGACCCGGC-CGCGGCCGC TGCCACCGACACCGC Caul_4213 4582084 - 4581347 - | ABC transporter related Caul_4214 4582550 - 4582179 - | hypothetical protein Caul_4215 4583414 - 4582569 - | UspA domain-containing protein Caul_4216 4583574 - 4584614 + | hypothetical protein Caul_4217 4585201 - 4584569 - | HdeD protein Caul_4218 4585393 - 4585713 + | hypothetical protein Caul_4219 4586033 - 4586728 + | GntR family transcriptional regulator Caul_4220 4587075 - 4586731 - | hypothetical protein Caul_4221 4588534 - 4587101 - | PepSY-associated TM helix domain-containing protein TERM 3011 4590187 - 4590205 + H 71 -9.5 -3.73534 | opp_overlap 4590182 CAGCTCATAATGCGG GGCCCCG AAGGA TGGGGCC TTGTTGGTGACGTTG TERM 3012 4591016 - 4590998 - H 72 -4.5 -4.54047 | TTAGGCTATACAAAA GAGCAGA CCGTC TCGGCTC GACGCCTTGCGCGCT Caul_4224 4591124 - 4591399 + | hypothetical protein Caul_4225 4591408 - 4592538 + | high-affinity nickel-transporter Caul_4226 4593194 - 4592769 - | hypothetical protein TERM 3013 4593000 - 4592982 - G 73 -10.2 -3.87815 | GGTCATCGCCAGAAA GCCCCGCG CAC CGCGAAGC TCCGCGATCTCGGCG Caul_4227 4594270 - 4593497 - | hypothetical protein TERM 3014 4594744 - 4594796 + G 100 -25.6 -2.8547 | gap 1, opp_overlap 4594736 4594779 TCCAATACGGGACGC GGGCGACGGGGCCGGCGC-GGCG CCCCCACA CGCAAGCGCCGGCCCCGTCGCCG TCTGATCTGGCCGCT TERM 3015 4594897 - 4594875 - g 91 -3.3 -5.45726 | gap 1 GACATCCTAAAAAAA GCCGCGCTCA TCTT CG-GAGCGGC CTCCCGATGAAGTTC Caul_4228 4594593 - 4594907 + | transposase IS3/IS911 family protein TERM 3016 4595466 - 4595456 - g 75 -4.6 -4.56775 | opp_overlap 4595438 ATCGCGCGCCAAAAA CCCG CGC CAGG CCTTATTCATCATTC Caul_4229 4594904 - 4595764 + | integrase catalytic region Caul_4230 4595840 - 4596157 + | heat shock protein Hsp20 Caul_4231 4597069 - 4596302 - | short-chain dehydrogenase/reductase SDR TERM 3017 4597865 - 4597905 + G 72 -13.2 -3.24747 | overlap 4597867 4597868 CATCGTCGGCTATCC GAACGGCGGGTCGCCG CCACCGGCC CGGCGGCCCGCCGATA TTCGTCGTGTCGCCA TERM 3018 4597867 - 4597903 + G 80 -15.8 -3.18849 | overlap 4597865 4597868 TCGTCGGCTATCCGA ACGGCGGGTCGCCG CCACCGGCC CGGCGGCCCGCCGA TATTCGTCGTGTCGC TERM 3019 4597868 - 4597902 + G 79 -19.3 -2.50988 | overlap 4597867 4597865 CGTCGGCTATCCGAA CGGCGGGTCGCCG CCACCGGCC CGGCGGCCCGCCG ATATTCGTCGTGTCG Caul_4232 4597293 - 4597937 + | nitroreductase Caul_4233 4597934 - 4600591 + | erythromycin esterase TERM 3020 4600928 - 4600951 + T 100 -11.6 -4.72986 | TCTTTCACGCGCCAA CGCCGCATCG AGCT CGGCGCGGCG TTTTTGATCCGGCTC TERM 3021 4601298 - 4601266 - T 100 -24.9 -3.66784 | overlap 4601248 4601244 4601267 GCATTGGCAAGAGAA GGCCGCCTTGCCGCG CGG CGCGGCAAGGCGGCA GGATCGTGCGGCGGG TERM 3022 4601297 - 4601267 - T 100 -28.4 -2.79749 | overlap 4601248 4601244 4601266 CATTGGCAAGAGAAG GCCGCCTTGCCGCG CGG CGCGGCAAGGCGGC AGGATCGTGCGGCGG Caul_4234 4602020 - 4601373 - | transport-associated Caul_4235 4602681 - 4603229 + | hypothetical protein TERM 3023 4604670 - 4604633 - gT 88 -14.7 -3.81447 | opp_overlap 4604633 4604663 4604667, overlap 4604622 GAGAGCCGACAACAA CGGCGAAGGCGGCGTCC TGTC GCTCGCCGCCCTGGCCG AAGCGGCCGTTGGAC TERM 3024 4604663 - 4604700 + GT 82 -3.9 -4.99043 | gap 1, opp_overlap 4604633, overlap 4604667 CCTGTCGCTCGCCGC CCTGGCCGAAGCGGCCGT TGG ACGGC-GCACCGGCTTGA TTTTCTTTCTCGGCG TERM 3025 4604667 - 4604696 + GT 76 -9.9 -3.90741 | gap 1, opp_overlap 4604633, overlap 4604663 TCGCTCGCCGCCCTG GCCGAAGCGGCCGT TGG ACGGC-GCACCGGC TTGATTTTCTTTCTC Caul_4237 4605654 - 4605082 - | putative transmembrane protein TERM 3026 4605167 - 4605141 - Gg 71 -2.3 -4.56597 | gap 1, overlap 4605143 CGGGCGCCTGAAAAA TG-CGGCCAA GAGCCTGA CTGGCCGACA CGATCACCGCCGCGC Caul_4236 4604370 - 4605200 + | K potassium transporter TERM 3027 4605531 - 4605518 - GT 71 -9.5 -3.72576 | TGCTCGGCCAGGAAA GCCGC GAGG GCGGC GGCCGCAACGCCCAA Caul_4238 4606447 - 4605767 - | two component transcriptional regulator Caul_4239 4609137 - 4606453 - | osmosensitive K+ channel signal transduction histidine kinase TERM 3028 4607622 - 4607607 - G 74 -11.8 -3.73107 | CCAGCAAAGTGGAAA CGGCGG CCGC CCGCCG CTGCGAGCCCCGCGC TERM 3029 4607794 - 4607776 - G 100 -17.4 -4.0162 | GTTGTAGACGAGAAA GGCCGCCG TGG CGGCGGCC AGGGCCGGTCGCAGG TERM 3030 4609107 - 4609056 - G 80 -15.9 -3.14051 | gap 2, opp_overlap 4609060 4609062 4609099, overlap 4609054 CCATGCCCAGGAACA CCTTGAGGCGCCCCCGGCCCGCC TTGTTGGC GGC-GGCCAGGAGCGCCTCG-GG ATCCGGGCGTTTGGG TERM 3031 4609130 - 4609149 + g 72 -3.4 -4.59773 | overlap 4609128 4609127 CGTTTGGGTTCCTCG GCCGGCAA GGCC TAGCCGCC TTTTTGGCCATGGGC Caul_4240 4609731 - 4609141 - | potassium-transporting ATPase, C subunit Caul_4241 4611860 - 4609791 - | K+-transporting ATPase, B subunit TERM 3032 4610930 - 4610973 + g 74 -12.5 -3.54029 | gap 3, overlap 4610927 GCAGCAGGGTGTCGA CGTCGCCGGCCGCCTCGACGGC CCG GCC--CGAGGTGGCCAG-GACG TTGTGCTTCATCAAC Caul_4242 4613589 - 4611880 - | potassium-transporting ATPase subunit A TERM 3033 4612039 - 4612002 - G 72 -14.1 -3.14051 | gap 1, overlap 4612000 GCAGGCCGACGAACA GGCCGCCATGGGTCGGCA GCG TGCCGGCCGACGG-GGCC AGCTTGGGCTTGCCC Caul_4243 4614009 - 4613692 - | hypothetical protein Caul_4244 4615161 - 4614775 - | transposase IS4 family protein Caul_4245 4615526 - 4615158 - | transposase and inactivated derivative Caul_4246 4617269 - 4615650 - | hemolysin-type calcium-binding region TERM 3034 4617032 - 4617042 + g 78 -8.2 -4.323 | overlap 4617030 TGTCGTCGGCCTCGC CGCC TAT GGCG TTTTCGATCTTTGCG TERM 3035 4617689 - 4617677 - R 93 -7.7 -5.00616 | TCGCTGCCCAAAAAA TCGAG TTT CTCGA CCCAGTTCGCGCCGG TERM 3036 4617801 - 4617791 - R 71 -4.6 -4.44245 | opp_overlap 4617794, overlap 4617794 ACAGCATTGACAAAA GCAG TCG CCGC GCCGTTTGCCGACCA Caul_4248 4618463 - 4618176 - | hypothetical protein TERM 3037 4618651 - 4618703 + G 100 -25.6 -2.8547 | gap 1, opp_overlap 4618643 4618686 TCCAATACGGGACGC GGGCGACGGGGCCGGCGC-GGCG CCCCCACA CGCAAGCGCCGGCCCCGTCGCCG TCTGATCTGGCCGCT TERM 3038 4618804 - 4618782 - g 91 -3.3 -5.45726 | gap 1 GACATCCTAAAAAAA GCCGCGCTCA TCTT CG-GAGCGGC CTCCCGATGAAGTTC Caul_4249 4618500 - 4618814 + | transposase IS3/IS911 family protein TERM 3039 4619373 - 4619363 - g 75 -4.6 -4.56775 | opp_overlap 4619345 ATCGCGCGCCAAAAA CCCG CGC CAGG CCTTATTCATCATTC Caul_4250 4618811 - 4619671 + | integrase catalytic region Caul_4251 4620408 - 4619932 - | activator of Hsp90 ATPase 1 family protein Caul_4252 4620751 - 4620401 - | ArsR family transcriptional regulator Caul_4253 4620942 - 4623227 + | excinuclease ABC subunit B TERM 3040 4623347 - 4623305 - f 71 -13.2 -3.04144 | opp_overlap 4623343, overlap 4623271 4623272 CGCGTAGCGCGAAGA TCCGGGACCGACGCCTGAGC TCA GCGCTTCCGGCGGTCCCGGA TCTGCCCCCGGCTTT TERM 3041 4623353 - 4623370 + F 77 -14.1 -3.30124 | overlap 4623343 CGGTCCCGGATCTGC CCCCGGC TTTC GCCGGGG TTGTCCGGGATGACA TERM 3042 4623370 - 4623387 + F 76 -5.6 -4.56597 | CCGGCTTTCGCCGGG GTTGTC CGGGAT GACAAC TTTTTCCCCAGCGAA Caul_4254 4623565 - 4623957 + | hypothetical protein TERM 3043 4624487 - 4624500 + G 100 -3.1 -5.69379 | gap 1 GAAGAATACGTGTCT GC-CGA TAT TCGCGC TTTTTTTCATTCTAT Caul_4255 4624046 - 4625722 + | hypothetical protein Caul_4256 4627820 - 4627212 - | hypothetical protein Caul_4257 4627910 - 4628425 + | hypothetical protein TERM 3044 4628468 - 4628426 - f 100 -25 -3.15544 | gap 2, opp_overlap 4628456 GTCTATCCTGAGTAA CGGACCGGCGGCGCGGTGGG GCATT CCCACCGC-CCGCCGG-CCG CGCTAGGCTCGCCGA Caul_4258 4628485 - 4629021 + | hypothetical protein Caul_4259 4629152 - 4629463 + | hypothetical protein Caul_4260 4629529 - 4630611 + | glycerophosphoryl diester phosphodiesterase Caul_4261 4631734 - 4630673 - | hypothetical protein Caul_4262 4631931 - 4632827 + | hypothetical protein TERM 3045 4634088 - 4634062 - g 74 -13.6 -3.31144 | CTTCGACGGCGACAA GGCCGGCCAGCG GGC CGCCAGCCGGGC CATCGACCGCGCCCT TERM 3046 4634750 - 4634800 + G 80 -16.8 -3.15544 | gap 1, opp_overlap 4634706 ACGCGCAAGGGCCTG GGGC-CGCAGCTGGCCGAGGCCG AACGCG TGGCCTCGGCGATCAGCGCGCCC TTCCTCGACGTGAAG Caul_4263 4633112 - 4635037 + | DNA primase Caul_4264 4635506 - 4635219 - | excinuclease ABC subunit C TERM 3047 4636047 - 4636077 + H 85 -14.8 -3.55622 | gap 1 CCACGTACACATTTC TCGAC-GCGCGCC CCGTTT GGCGCGCCGTCGA TTTCGGAGACTTGAA TERM 3048 4636374 - 4636342 - g 71 -11.2 -3.62176 | gap 1 AAGAAGACGCTGAAA CCTCCGAGGGCGGCG AAGT CGTCGCCCGCG-AGG ACAACCAGCAGGTCA TERM 3049 4637047 - 4636994 - g 72 -8.3 -3.97139 | gap 3, opp_overlap 4637006, overlap 4636957 4636991 4636995 4637033 GAAGCTGAACAACAA CCGCATCGAGGCGCTGGTCGAGCAGC TCTAT GC-GATCAACAAGCGCCT-GAT-CGG CCTGGAAGGCCGGCT TERM 3050 4637669 - 4637658 - g 71 -2.2 -4.57073 | gap 1, overlap 4637645 4637659 GAGCTGGCCGAAAAA CTGGC CAT GCC-G CTGGAGAAGGTGCGC Caul_4265 4636092 - 4638041 + | RNA polymerase sigma factor RpoD TERM 3051 4638100 - 4638063 - T 88 -16.9 -3.09968 | opp_overlap 4638068 4638092, overlap 4638068 CAGGGAATTCGAAGA TCAGACGCCCGCCCCGG GGAG CCGGGGCGGGCGTTTTT CTTTGCGCGAGGCCA TERM 3052 4638068 - 4638095 + T 100 -25.6 -5.27335 | opp_overlap 4638063 4638068, overlap 4638092 AATTCGAAGATCAGA CGCCCGCCCCGG GGAG CCGGGGCGGGCG TTTTTCTTTGCGCGA TERM 3053 4638095 - 4638068 - T 100 -25.6 -2.92293 | opp_overlap 4638068 4638092, overlap 4638063 AATTCGAAGATCAGA CGCCCGCCCCGG GGAG CCGGGGCGGGCG TTTTTCTTTGCGCGA TERM 3054 4638155 - 4638134 - T 100 -17.3 -4.56597 | opp_overlap 4638092 GTCTCGCCCCAAAAA GGCGGCTCC ATTC GGAGCCGCC CTGGAGTCCCGACGG Caul_4266 4639026 - 4638181 - | hypothetical protein Caul_4267 4640410 - 4639121 - | peptidase S8 and S53 subtilisin kexin sedolisin Caul_4268 4640542 - 4641042 + | ECF subfamily RNA polymerase sigma-24 factor Caul_4269 4641039 - 4641866 + | putative transmembrane anti-sigma factor TERM 3055 4641886 - 4641846 - T 91 -18.9 -3.0806 | TGGAAACCTGTAAGA GGAGGAGCCGCCCCCCGGT AGA ACCGGAGGGCGGCGGGTCC GAACCCGCGCAGGGG Caul_4270 4642184 - 4641951 - | hypothetical protein Caul_4271 4642543 - 4642343 - | hypothetical protein Caul_4272 4642819 - 4644477 + | peptidase M28 TERM 3056 4644751 - 4644781 + G 76 -14 -3.53091 | gap 1, opp_overlap 4644736 TCGGCATGATCCTGG CCGG-CCTGGCCG GGATCG CGGCCGGGGCCGG TTTCGCCCACGCCCT Caul_4273 4644573 - 4645232 + | hypothetical protein Caul_4274 4645929 - 4645297 - | hypothetical protein Caul_4275 4645978 - 4646274 + | hypothetical protein Caul_4276 4646271 - 4646549 + | plasmid stabilization system protein Caul_4277 4646569 - 4648473 + | excinuclease ABC subunit C Caul_4278 4649762 - 4648596 - | saccharopine dehydrogenase TERM 3057 4649842 - 4649891 + r 100 -22.9 -3.10012 | AACTGTTCGACCCAT CCCTTTGATCCGCTCATCCCGGC CAAA GCCGGGATGAGCGGAATTCAGGG TTGGGTGCTCGGCTT Caul_4279 4651166 - 4649886 - | major facilitator transporter TERM 3058 4650687 - 4650651 - G 76 -2.7 -4.72986 | overlap 4650652 CAGCGCCAGGAAAAA CCCGTTGGCGGCGATGA AGC CCACCGGCGCCCCCAGC TGCGGGAACATGCCA TERM 3059 4650730 - 4650705 - G 71 -11.7 -3.66803 | opp_overlap 4650706, overlap 4650706 CGGGAACATGCCAAA GCGCGCCCGCC AGCC GGGGGGCGCGT TCTCCACCGCCAACA TERM 3060 4650706 - 4650729 + g 79 -15.2 -3.28712 | opp_overlap 4650706 4650705 GGGAACATGCCAAAG CGCGCCCGCC AGCC GGGGGGCGCG TTCTCCACCGCCAAC TERM 3061 4650729 - 4650706 - G 70 -15.2 -2.7976 | opp_overlap 4650706, overlap 4650705 GGGAACATGCCAAAG CGCGCCCGCC AGCC GGGGGGCGCG TTCTCCACCGCCAAC TERM 3062 4650944 - 4650930 - G 71 -11.4 -3.57462 | GACCCGATCCCCAAA GTGGCC GAA GGCCAC GGCTCCAAGAGGCCG TERM 3063 4652022 - 4652043 + G 79 -10.9 -4.04474 | CGGAGAGAACGCATC GCGCCAAGT ACCA ACTTGGTGC TTTATATACCCCTCT Caul_4280 4651408 - 4652454 + | TonB family protein Caul_4281 4652488 - 4653105 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Caul_4282 4653744 - 4653505 - | hypothetical protein TERM 3064 4653539 - 4653559 + g 71 -10.4 -3.72027 | gap 1 GCGGTCTTGCGCTTG GCGGCGGCG GTCG CGCCGC-GC TTCTTGGTGGCCGCT TERM 3065 4653788 - 4653769 - H 100 -10 -4.81249 | opp_overlap 4653767, overlap 4653762 CGGGAAATCGAAAAA CTCTCGCA AGAG CGCGAGAG AATTCACTAACGTTC TERM 3066 4654116 - 4654132 + G 78 -9.3 -4.26344 | CTTCATCCAACCTGA CGACGGC GGC GCCGACG TTTTCGTGCACATCT Caul_4283 4654054 - 4654260 + | cold-shock DNA-binding domain-containing protein TERM 3067 4654287 - 4654312 + F 100 -18.3 -5.27335 | TCACGAGATTTGGAA TGGGTCGGCGC TCAC GCGCCGGCCCA TTTTTCTTTGGGCGA Caul_4284 4654453 - 4655649 + | patatin TERM 3068 4655954 - 4655992 + F 72 -7.3 -4.13767 | gap 1, overlap 4655954 CAAGATGGTCGGCAG CGGGCGCGCGGAGTGCGC GACC GTGT-CTCTGCGCGCGAG TTTTCCAATGCCCAA TERM 3069 4655954 - 4655976 + F 71 -12.6 -2.98823 | overlap 4655954 CAAGATGGTCGGCAG CGGGCGCGCG GAG TGCGCGACCG TGTCTCTGCGCGCGA Caul_4285 4655976 - 4659293 + | carbamoyl phosphate synthase large subunit Caul_4286 4659590 - 4659985 + | hypothetical protein Caul_4287 4661039 - 4660164 - | restriction endonuclease TERM 3070 4660763 - 4660803 + g 79 -14.6 -3.28712 | gap 1, overlap 4660765 4660795 GGGCCGGCGTCAGGG CCGCGCCCAGCGGCGTCAG CCGC CAGACGCCGC-GCGCGCTG TTCTCGACCGCGCCG TERM 3071 4660765 - 4660801 + g 80 -15.8 -3.21276 | gap 1, overlap 4660763 4660795 GCCGGCGTCAGGGCC GCGCCCAGCGGCGTCAG CCGC CAGACGCCGC-GCGCGC TGTTCTCGACCGCGC TERM 3072 4661804 - 4661816 + H 73 -3.4 -4.79174 | opp_overlap 4661804, overlap 4661799 TGTCGGGTCGGAAAA TACG ATCAA CGTA TTTTCTTCATTCCCT Caul_4289 4664272 - 4664724 + | hypothetical protein Caul_4290 4664804 - 4665466 + | glutathione S-transferase domain-containing protein TERM 3073 4665482 - 4665504 + F 80 -14.2 -3.18582 | opp_overlap 4665482 4665501 GCGGCCCTCACTGAA CCCCTCTTTC TTT GAGAGAGGGG TTCGTAAGTCCCCTG TERM 3074 4665727 - 4665758 + G 74 -12.3 -3.56092 | gap 1, overlap 4665722 TGGCCGCCGGCGCCG CGCCG-CGCGATCC CGCCC GGGTCGCGGCGGTG TTTCCGCCCTGGTGG TERM 3075 4665891 - 4665943 + G 74 -14 -3.28712 | gap 1 GGGCCGCGCCTGCGC GCGGC-CGGCGCCTGGCTGCTGC TCGATCCC GCCGCCGCCGGGCGCTGCGCCCC TTCTCCGGAGCCCCG Caul_4291 4665618 - 4665962 + | hypothetical protein Caul_4292 4665962 - 4667569 + | methyl-accepting chemotaxis sensory transducer Caul_4293 4667716 - 4668189 + | transcription elongation factor GreA TERM 3076 4668218 - 4668255 + F 100 -21.3 -3.83026 | gap 1 CCAGGGACATTGCAT GCGACGCGCCGGAC-GGC CTA GCTTGGCCGGCGCGTCGC TTTGCTATGGCCGGG Caul_4294 4668262 - 4669632 + | hypothetical protein Caul_4295 4669662 - 4670393 + | hypothetical protein TERM 3077 4670711 - 4670731 + G 70 -8.2 -3.95435 | GACCCTGGTCTTCGT TGCGCTGC AAGGC GCCGCGCA TTATGTTTTGCGCAA Caul_4296 4670550 - 4670759 + | hypothetical protein Caul_4297 4670762 - 4670857 + | hypothetical protein Caul_4298 4670878 - 4671591 + | acylneuraminate cytidylyltransferase TERM 3078 4672753 - 4672780 + G 80 -16.2 -3.15861 | GGCGGTGTGCGACGG CCGCGGCGCGGC GCGG GTCGCGGCGCGG TTCCTGGCGCTGCTG Caul_4299 4671764 - 4672804 + | flagellin modification protein FlmD TERM 3079 4672876 - 4672823 - f 82 -10.9 -4.08394 | gap 1, opp_overlap 4672859 ACATCCGCCCCAAAA TCGCCTGTC-ATCCCGGACAAGCGCG CAG CGCGCCGATCCGGGACCGACGCGTGA ACTCAGCGCTTCCGG Caul_4300 4673047 - 4673904 + | short-chain dehydrogenase/reductase SDR TERM 3080 4674081 - 4674095 + F 78 -3.4 -5.07652 | opp_overlap 4674059, overlap 4674050 ACCTGATTGCATCAG GCCGGG GCT CTAGGC TTTTGTTTTAACGCA TERM 3081 4675309 - 4675274 - g 78 -14.1 -3.58343 | gap 1, opp_overlap 4675297 4675297 CCGACGAGGCTGAAA CGACGCCG-TCGGC GGACGCCAA GCCGACCGGCGTCG CCGCCCAGGTTCTGG Caul_4301 4674298 - 4675404 + | PHB depolymerase family esterase Caul_4302 4675532 - 4676047 + | hemerythrin HHE cation binding domain-containing protein Caul_4303 4677149 - 4676064 - | N-acetylneuraminate synthase Caul_4304 4677383 - 4678390 + | thioredoxin reductase Caul_4305 4679636 - 4678398 - | cell wall hydrolase SleB Caul_4306 4680132 - 4679653 - | Ferritin Dps family protein TERM 3082 4680236 - 4680223 - g 72 -4.5 -4.45115 | overlap 4680224 ATGAAGACAAAAGAA CCACT CGCA AGCGG TCGCGGGCGCTCGAC TERM 3083 4680434 - 4680460 + G 78 -13.7 -3.65812 | gap 1, overlap 4680451 TGGTCACCCTCTACG CCGGC-TGGCGC TGGG GCGCCGCGCCGG TTCTGTTCGGCACGA Caul_4307 4680208 - 4682628 + | multi-sensor hybrid histidine kinase TERM 3084 4682847 - 4682859 + F 83 -4.7 -5.01732 | GCTGACGAGACGCTC CCCCG TTC CGGCG TTTTTTGAGGCCCTT Caul_4308 4682908 - 4684005 + | quinolinate synthetase TERM 3085 4684033 - 4684007 - f 84 -13.7 -3.68619 | overlap 4684008 TGGAACTGATCTAAA GCCCTTCCCCC TTGAT GGGGGAAGGGT TGGGATGGGGGTGAC TERM 3086 4684032 - 4684008 - f 84 -17.2 -2.8085 | overlap 4684007 GGAACTGATCTAAAG CCCTTCCCCC TTGAT GGGGGAAGGG TTGGGATGGGGGTGA TERM 3087 4684677 - 4684631 - g 73 -7.1 -4.10657 | opp_overlap 4684667 CGAGATCCGCGAAAA CGCCCGCGCGCGCCGCCTGC-TC CAG GACGCGACCGGC-CGCGTGGTCG GGGTGTTGGCCGAGA Caul_4309 4684167 - 4685687 + | L-aspartate oxidase Caul_4310 4685717 - 4686310 + | hypothetical protein Caul_4311 4686307 - 4687164 + | nicotinate-nucleotide pyrophosphorylase TERM 3088 4687373 - 4687392 + G 78 -10 -4.13767 | CAGTCGCTCGACATT CTGGTCGG GGTG CTGACCAG TTTTGGCCTGCGCAA Caul_4312 4687295 - 4687888 + | response regulator receiver protein TERM 3089 4687915 - 4687904 - g 100 -7.2 -5.53288 | opp_overlap 4687903 4687911 GTGAAGTCAAAAAAA GCCG CATG CGGC CTCGTCTCGGCCAGC Caul_4313 4687885 - 4688364 + | hypothetical protein Caul_4314 4689608 - 4688424 - | acyltransferase 3 TERM 3090 4689536 - 4689526 - G 71 -2.4 -4.57569 | opp_overlap 4689494, overlap 4689528 CCATGGGGGGAAAAA CGCG TGG CGTG TTCGGCGACAGGGGT TERM 3091 4689960 - 4689906 - g 79 -15.4 -3.30124 | overlap 4689891 CGCCATCGCCGACAA CGCCTGGAGCCGCGCCTGGGCGCAGC TCG GCCGGGACCTGCCGCGTCCCAAGGCG GTGCTGATGATCAGC Caul_4315 4689841 - 4690614 + | extradiol ring-cleavage dioxygenase class III protein subunit B Caul_4316 4690668 - 4691384 + | glutathione S-transferase-like protein Caul_4317 4692146 - 4691706 - | hypothetical protein TERM 3092 4692299 - 4692241 - R 71 -9.7 -3.81488 | overlap 4692250 TTGGCGCAAACACAA TCTCCAATATTGTCATCCCGGA-AGCCTC GCG GAGGCTCTCCGGGATGACACCCTCAGCG- CATCGAAGCGCGGCT TERM 3093 4692291 - 4692250 - R 93 -21.1 -3.07501 | gap 1, overlap 4692241 ACACAATCTCCAATA TTGTCATCCCGGA-AGCCTC GCG GAGGCTCTCCGGGATGACAC CCTCAGCGCATCGAA Caul_4318 4693011 - 4692313 - | ThiJ/PfpI domain-containing protein Caul_4319 4693100 - 4694074 + | AraC family transcriptional regulator Caul_4320 4694704 - 4694129 - | hypothetical protein Caul_4321 4694852 - 4695031 + | hypothetical protein TERM 3094 4695114 - 4695082 - f 70 -9.8 -3.53811 | overlap 4695049 4695106 GCCACCTCCCCCAAA GGGGGAGGAGCTAC GCCGA GCAGATGCTCCCCC TCTGGGGGAGCTGTC Caul_4322 4695225 - 4696034 + | short chain dehydrogenase Caul_4323 4697121 - 4695994 - | cell wall hydrolase SleB TERM 3095 4696033 - 4696063 + g 72 -13.3 -3.16881 | gap 1, opp_overlap 4696004 CGCCGCTGACGACTT GACCGCGTCGCCCG AGGC CGGG-GACGAGGTC TTGGTGGGGTGCATG TERM 3096 4696155 - 4696104 - G 82 -15.1 -3.53343 | gap 2, overlap 4696091 4696105 AAGCGGGTTCGGAAA CCGCGCCCAGCGGGCCGCCCATGCC GCCG GGCGTGGTCG-CCGGCTGAGCG-GG CGACGAGATCACCAG TERM 3097 4696155 - 4696105 - G 70 -15.3 -2.71791 | gap 1, overlap 4696091 4696104 AGCGGGTTCGGAAAC CGCGCCCAGCGGGCCGCCCATGCC GCCG GGCGTGGTCG-CCGGCTGAGCGGG CGACGAGATCACCAG TERM 3098 4697384 - 4697372 - R 85 -3.3 -5.27477 | overlap 4697373 ATTCCAACGAAAAAA CGCGA CAG TCCCG CAAACCGGCTTCAGG TERM 3099 4697505 - 4697492 - R 78 -6.7 -4.62336 | AGCGGATGCGAAAAA TGTCC GGCA GGACA TAAGGACTGCTCTTC TERM 3100 4697609 - 4697558 - R 74 -14.3 -2.52464 | gap 2 GGGGGCGTTAACCCA GGGGGCGG-GCAG-CGGCCCCCCGG AGCA CCGCGCGGCCGGCTGAACCGCCGCC AAAGCCGCGTTCGCC TERM 3101 4697696 - 4697669 - R 71 -11.2 -3.53091 | gap 1 AGGCCGGGGCGGAAA CGCCGGGC-CGGG CGC CCCGCGCCAGACG CCACAGCTCGCCCGC Caul_4324 4698674 - 4697652 - | hypothetical protein Caul_4325 4699019 - 4698690 - | PadR-like family transcriptional regulator Caul_4326 4699157 - 4700719 + | tetratricopeptide TPR_4 TERM 3102 4700953 - 4700967 + T 78 -3.4 -5.07652 | opp_overlap 4700931, overlap 4700923 ACCTGATTGCATCAG GCCGGG GCT CTAGGC TTTTGTTTTAACGCA Caul_4327 4701479 - 4701048 - | AsnC family transcriptional regulator Caul_4328 4701593 - 4703020 + | D-lactate dehydrogenase (cytochrome) TERM 3103 4703067 - 4703036 - f 100 -26 -3.01924 | GATTGCCCCTTAACA CCGCTCATCCCGGC GAAT GCCGGGATGAGCGG ATCGAGGGAACCATC Caul_4329 4703104 - 4704123 + | hypothetical protein Caul_4330 4704522 - 4704139 - | response regulator receiver protein TERM 3104 4704278 - 4704236 - G 74 -15.7 -3.06492 | gap 1 TGATCCAGGCGAATA CGATCCATCGTCGCCGGCTC CCGC GAGCCGGTGACGA-AGATCA CCTTCGAGCCGACCG TERM 3105 4704309 - 4704328 + g 70 -12.8 -3.32343 | TCTGATAGATTTCCA GGGCGGCG TCGA CGCCGTCC TTGTCGCCCTGTAGC Caul_4331 4706156 - 4704519 - | signal transduction histidine kinase TERM 3106 4706569 - 4706541 - R 100 -18.2 -4.55798 | opp_overlap 4706566 GAGGGGAAACGAAAA CCGGCTGGCTCC GGGGG AGAGCCAGCCGG CCGTCGGCGGCGGGT TERM 3107 4706566 - 4706583 + r 86 -8.3 -4.56597 | opp_overlap 4706541 CCGGGGGAGAGCCAG CCGGCCG TCGG CGGCGGG TTTTTCGGGGGAGAA Caul_4332 4707330 - 4706731 - | flavoprotein WrbA Caul_4333 4708092 - 4707394 - | pirin domain-containing protein Caul_4334 4708297 - 4709205 + | LysR family transcriptional regulator Caul_4335 4709928 - 4709212 - | hypothetical protein TERM 3108 4709921 - 4709896 - G 79 -5.3 -4.78149 | overlap 4709898 TCGATAATTGAAAAA CCTGGCCGC CCGCTTCC ACGGCCCGG CGACCACACCCGACA Caul_4336 4710155 - 4710030 - | hypothetical protein Caul_4337 4711720 - 4710284 - | hypothetical protein TERM 3109 4710554 - 4710517 - G 70 -9 -3.85698 | gap 1 TGTCCTGGCCATAAA GTCCGGCGCGCG-GCCC AGCCA GGGCGCGCGCTTCCGAC GCCTCGCCACAGAAC TERM 3110 4711845 - 4711861 + H 75 -3 -4.8622 | overlap 4711846 ACAGGGCGTTCGGGA TCCTTT AATCC AAAGGG TTTTTCCTTGCCGAG TERM 3111 4711970 - 4711944 - H 100 -13.6 -4.58773 | TGGACCAAATCAAAA GGCGGGGGCGTT GCA AGCGCCCACGCC ATAAAACGAACCGAG TERM 3112 4712848 - 4712826 - g 77 -14.8 -3.21099 | CTCGGCGATCATCAA CGCCCTGGCC GGC GGCAAGGGCG TGGGCGCCTTGACCG Caul_4338 4711993 - 4714587 + | TonB-dependent receptor TERM 3113 4714634 - 4714659 + F 100 -18.3 -4.30014 | opp_overlap 4714634 CGCATGTCGAGACGA GGGCGATCCGG GCAA CCGGGTCGCCC TTTTCCGTTCCTGCC TERM 3114 4714659 - 4714634 - f 80 -16.1 -2.62983 | opp_overlap 4714634 CGCATGTCGAGACGA GGGCGATCCGG GCAA CCGGGTCGCCC TTTTCCGTTCCTGCC TERM 3115 4714672 - 4714697 + F 71 -4.6 -4.4009 | CCCTTTTCCGTTCCT GCCCCGCC TTTTCCGTGC GGCGGCGC TTTTATCGAATCCCG TERM 3116 4715649 - 4715606 - g 70 -15.2 -2.74012 | overlap 4715621 4715622 CGACCACCTGAACCA GGGCAGCCTGCAGAACCTGG GCGA CCAGGCCCTGCCGACCGTCC GGACCCTGGCCGCCA TERM 3117 4716418 - 4716456 + G 78 -16.7 -3.04792 | gap 1 GGGGGGCCTGGACCT TCGCCGGCGTCGGCCTGC TGGA GCCGGCCG-TGCTGGCGA TGTTCGCCGTCCTGG Caul_4339 4714758 - 4717205 + | peptidase M28 TERM 3118 4717244 - 4717203 - T 81 -12.9 -3.70773 | opp_overlap 4717208, overlap 4717205 4717207 4717208 GGGGAGACCCAACAA TAGATCCGCTCATCCCGGC ATTC GCCGGGAGGAGCGGTTGTT GGGTAAAGGTTTGGG TERM 3119 4717242 - 4717205 - T 85 -15.5 -3.43446 | opp_overlap 4717208, overlap 4717203 4717207 4717208 GGAGACCCAACAATA GATCCGCTCATCCCGGC ATTC GCCGGGAGGAGCGGTTG TTGGGTAAAGGTTTG TERM 3120 4717240 - 4717207 - T 93 -18.1 -3.28304 | opp_overlap 4717208, overlap 4717205 4717203 4717208 AGACCCAACAATAGA TCCGCTCATCCCGGC ATTC GCCGGGAGGAGCGGT TGTTGGGTAAAGGTT TERM 3121 4717239 - 4717208 - T 100 -21.6 -2.56259 | opp_overlap 4717208, overlap 4717207 4717205 4717203 GACCCAACAATAGAT CCGCTCATCCCGGC ATTC GCCGGGAGGAGCGG TTGTTGGGTAAAGGT TERM 3122 4717208 - 4717239 + T 100 -21.6 -3.67775 | opp_overlap 4717208 4717207 4717205 4717203 GACCCAACAATAGAT CCGCTCATCCCGGC ATTC GCCGGGAGGAGCGG TTGTTGGGTAAAGGT Caul_4340 4719154 - 4717292 - | acyl-CoA synthetase TERM 3123 4719396 - 4719435 + r 100 -26.6 -3.14211 | overlap 4719431 CGGGTTTTAGGGGAT CACGATTGGGGACAGGCG CATG CGCCTGTCCCCAATCGCG TTACTCCGCCGCGAT Caul_4341 4720875 - 4719436 - | aldehyde dehydrogenase Caul_4342 4721457 - 4720987 - | NUDIX hydrolase Caul_4343 4721833 - 4721468 - | hypothetical protein TERM 3124 4722079 - 4722043 - g 70 -12.2 -3.33315 | gap 2, overlap 4722032 CTAAGACCGTGACAA CGCGCGGCGCGGCCCTGG TCA CCGGCGCCG-GCCGC-CG GATCGGCCGCGCCCT Caul_4344 4722036 - 4722788 + | short chain dehydrogenase Caul_4345 4722799 - 4723230 + | dihydroneopterin aldolase Caul_4346 4723227 - 4723805 + | hypothetical protein Caul_4347 4723895 - 4724272 + | hypothetical protein Caul_4348 4724275 - 4724688 + | hypothetical protein TERM 3125 4724721 - 4724746 + F 72 -11.7 -3.33969 | overlap 4724725 AGCATGGCTGTTTCC CGGGCGCCTGG CGCG CGCGGCGCCCG TTATGGCGTCGCTTC TERM 3126 4725432 - 4725386 - g 74 -14.4 -3.31792 | CGACGATCGCGAGAA GGCCCTGGCCAATCGCGA CCTGGGCGACT TCGCGCGCGGCCAGGGCC GGCTGGACGAGGCCG Caul_4349 4724859 - 4725863 + | TPR repeat-containing protein Caul_4350 4726247 - 4726792 + | MarR family transcriptional regulator Caul_4351 4726789 - 4727490 + | two component transcriptional regulator TERM 3127 4728752 - 4728726 - g 100 -11.4 -4.95876 | AACCAGAACGAAAAA GGCGTCGGCCTG GGC CTGGCCATCGCC CGCGACATGGCGCGG Caul_4352 4727490 - 4728842 + | integral membrane sensor signal transduction histidine kinase TERM 3128 4728968 - 4728985 + T 77 -14.1 -3.30124 | overlap 4728950 CGGTCCCGGATCCGC CCCCGGC TTTC GCCGGGG TTGTCCGGGATGACA Caul_4353 4730605 - 4729064 - | hypothetical protein TERM 3129 4731563 - 4731544 - g 79 -2.8 -4.87318 | TCGAAAACCTAAAAA CTCCGC TCTTTCCG GCGAAG GCCGGGACCCAGATC Caul_4354 4730886 - 4731596 + | YhhN family protein Caul_4355 4731822 - 4732760 + | transposase IS116/IS110/IS902 family protein Caul_4356 4734610 - 4732799 - | feruloyl-CoA synthase TERM 3130 4732866 - 4732843 - G 72 -8.8 -4.09685 | gap 1 GCTCATCGGCGAAAA GCCGCGCCAGC TCG GCCGGC-CGAC GGTCCCGCGCCAGGG Caul_4357 4736133 - 4734799 - | dihydroorotase TERM 3131 4736198 - 4736226 + H 74 -5.2 -4.56775 | opp_overlap 4736198 4736199 4736214 4736215, overlap 4736214 4736215 TGGCTGTGGCGAAAA CCTCGTCCTTCG ACAAG CTCAGGATGAGG TTTTTAGAGCGCCCT Caul_4358 4736427 - 4737512 + | proline iminopeptidase Caul_4359 4738724 - 4737579 - | glycosyl transferase family protein Caul_4360 4738824 - 4739705 + | folate-binding protein YgfZ Caul_4361 4739763 - 4740236 + | hypothetical protein Caul_4362 4740229 - 4740438 + | XRE family transcriptional regulator TERM 3132 4740464 - 4740500 + T 86 -11.6 -4.13945 | opp_overlap 4740485, overlap 4740462 CCTGAACGCCGTGCG TGGTCCTCGTCCTTCG ACAAG CTCAGGATGAGGACCA TTTTGGGCTCGGGAT Caul_4363 4740820 - 4740545 - | excinuclease ABC, C subunit-like protein TERM 3133 4740915 - 4740929 + H 85 -10 -4.30719 | TCAAATCTCATGGCG CGCTTG GCG CAAGCG TTTGTTCTCGAAAAG Caul_4364 4740983 - 4741570 + | DNA-3-methyladenine glycosylase I Caul_4365 4741703 - 4742212 + | hypothetical protein TERM 3134 4742733 - 4742691 - g 72 -13.4 -3.14132 | overlap 4742703 GCCCTGCCCGATCAA GACGGTGATCAAGGGCGACA GCC TGTCGTGCTCGATCGCCGCC GCCTCGATCCTGGCC Caul_4366 4742272 - 4742964 + | ribonuclease H TERM 3135 4743002 - 4742979 - f 72 -11.7 -3.35371 | opp_overlap 4742982, overlap 4742954 4742980 4742982 GACAGGCCCAACCAA CCACCGCCG TTTTCC CGGCGATGG CCGGGGAGACGGGGA TERM 3136 4743019 - 4742980 - f 74 -14.2 -2.60901 | opp_overlap 4742982, overlap 4742954 4742979 4742982 ACAGGCCCAACCAAC CACCGCCGTTTTCCCGGC GATG GCCGGGGAGACGGGGATG TTGCGACCGCTCCAC TERM 3137 4742982 - 4743017 + F 71 -13.2 -3.02144 | opp_overlap 4742979 4742982 4742980 AGGCCCAACCAACCA CCGCCGTTTTCCCGGC GATG GCCGGGGAGACGGGGA TGTTGCGACCGCTCC TERM 3138 4743061 - 4743042 - f 89 -10.8 -4.30995 | overlap 4743039 CGCTCCACAAAATAA TTGAGTCC AATC GGACTCAA AACCCAGGGTTAACC TERM 3139 4743826 - 4743852 + G 72 -13.6 -3.15544 | overlap 4743829 GTTGGCACCACCGGC GCGGCCGCCAAG CGC CTGGGCCGCCGC TTCGTCGGCATCGAG Caul_4367 4743157 - 4744233 + | DNA methylase N-4/N-6 domain-containing protein Caul_4368 4745430 - 4744378 - | A/G-specific adenine glycosylase TERM 3140 4745512 - 4745502 - H 71 -8.2 -3.91897 | opp_overlap 4745507, overlap 4745503 CGGTCCAGTGACAAA GCGC GGC GCGC GGCGCTATATTGAGG TERM 3141 4745618 - 4745589 - H 78 -10 -4.08216 | gap 2, opp_overlap 4745592 4745593 4745594, overlap 4745590 CCATGCCGGTGAAAA GCGCCGCGCGCGCC GTGA AGC-CGCGCG-CGC TGTTGTCGGACACCG TERM 3142 4745592 - 4745620 + H 77 -13.7 -3.28712 | opp_overlap 4745589 4745590, overlap 4745593 4745594 TGCCGGTGAAAAGCG CCGCGCGCGCCGT GAA GCCGCGCGCGCTG TTGTCGGACACCGAG TERM 3143 4745593 - 4745617 + H 74 -14.2 -2.52623 | opp_overlap 4745589 4745590, overlap 4745592 4745594 GCCGGTGAAAAGCGC CGCGCGCGCC GTGAA GCCGCGCGCG CTGTTGTCGGACACC TERM 3144 4745594 - 4745618 + H 80 -14.9 -3.21276 | opp_overlap 4745589 4745590, overlap 4745593 4745592 CCGGTGAAAAGCGCC GCGCGCGCCGT GAA GCCGCGCGCGC TGTTGTCGGACACCG Caul_4369 4745749 - 4746066 + | plasmid stabilization system protein Caul_4370 4746154 - 4746690 + | hypothetical protein Caul_4371 4746846 - 4747481 + | DSBA oxidoreductase TERM 3145 4748014 - 4747996 - g 70 -12.4 -3.31263 | opp_overlap 4747996 AGCCGAGCGCGACAA GGTCGAGG TCA CCCCGACC TTCTTCGTCAACGGC TERM 3146 4747996 - 4748014 + G 71 -10.2 -3.71848 | opp_overlap 4747996 AGCCGAGCGCGACAA GGTCGAGG TCA CCCCGACC TTCTTCGTCAACGGC Caul_4372 4747478 - 4748113 + | DSBA oxidoreductase Caul_4373 4748129 - 4751590 + | chromosome segregation protein SMC Caul_4374 4752514 - 4751720 - | hypothetical protein Caul_4375 4752915 - 4752586 - | hypothetical protein Caul_4376 4753414 - 4753764 + | putative ATP synthase protein I Caul_4377 4753779 - 4754552 + | F0F1 ATP synthase subunit A Caul_4378 4754611 - 4754835 + | H+transporting two-sector ATPase C subunit TERM 3147 4755458 - 4755511 + G 71 -2.1 -4.56597 | gap 1 CAAGGCCGCCTCGGC CGCGGATCTCAAG-GCCGCGACCGCT CTC AGCGGAGGAGCCGCCTGATGCCCGCG TTTTTCGAAGGCGAA Caul_4379 4754904 - 4755503 + | H+transporting two-sector ATPase B/B' subunit Caul_4380 4755503 - 4756018 + | H+transporting two-sector ATPase B/B' subunit TERM 3148 4756074 - 4756039 - T 100 -17.6 -4.07568 | opp_overlap 4756045, overlap 4756045 TCGGTTTGGCGAAAA CATCAAGGGCGCGTCC TCCG GGACGCGCCCTTTTTG CTGTGCGGCGAGCGT TERM 3149 4756045 - 4756068 + T 100 -19.6 -4.8048 | opp_overlap 4756039 4756045 TGGCGAAAACATCAA GGGCGCGTCC TCCG GGACGCGCCC TTTTTGCTGTGCGGC TERM 3150 4756068 - 4756045 - T 100 -19.6 -3.53779 | opp_overlap 4756045, overlap 4756039 TGGCGAAAACATCAA GGGCGCGTCC TCCG GGACGCGCCC TTTTTGCTGTGCGGC Caul_4381 4756705 - 4756262 - | hypothetical protein TERM 3151 4756747 - 4756723 - R 73 -8.4 -4.08767 | overlap 4756738 CCCAGTCTTGGAAAA CTGGCGCCGG AACGA CCGGCGCTTG GCCGACTTGCGCCAG Caul_4382 4757133 - 4756702 - | hypothetical protein TERM 3152 4757206 - 4757245 + r 86 -8.4 -4.66987 | opp_overlap 4757212 4757231, overlap 4757207 CTCACAACGCCGATA TGAGAACGGGGCGCCTTT CCGT AAAGGCGCCTCGCCCCCC TTTTGTTCGACTGTG TERM 3153 4757207 - 4757244 + r 72 -11.9 -3.39469 | opp_overlap 4757212 4757231, overlap 4757206 TCACAACGCCGATAT GAGAACGGGGCGCCTTT CCGT AAAGGCGCCTCGCCCCC CTTTTGTTCGACTGT TERM 3154 4757239 - 4757212 - R 85 -15.6 -3.4678 | opp_overlap 4757207 4757206, overlap 4757231 ACGCCGATATGAGAA CGGGGCGCCTTT CCGT AAAGGCGCCTCG CCCCCCTTTTGTTCG Caul_4383 4758848 - 4757265 - | glycine dehydrogenase subunit 2 Caul_4384 4760206 - 4758845 - | glycine dehydrogenase subunit 1 TERM 3155 4759343 - 4759295 - G 72 -13.8 -3.21416 | opp_overlap 4759320 4759324 CAGGGTCAGGACGAA GCCGCGACGGCCGT-CGGCGTCGA CGG TCT-CGCCGCACAGCCGGCCCGGC GCCTGGCGGACGTAT Caul_4385 4760725 - 4760207 - | hypothetical protein Caul_4386 4761094 - 4760729 - | glycine cleavage system H protein Caul_4387 4762222 - 4761110 - | glycine cleavage system T protein TERM 3156 4762340 - 4762359 + H 72 -12.2 -3.36569 | overlap 4762339 CTTGCTCCTTCGGCG GGCAGTCT TTTC AGACTGCC TCTTTCCAGCGTTCC TERM 3157 4762581 - 4762555 - H 75 -14.6 -2.81173 | AGGAACGTGATTAGA TTTGAGGTCACA ATT TGCGACCTCAAA GAACGGCCATGACGG TERM 3158 4762822 - 4762796 - H 100 -18.2 -3.56092 | opp_overlap 4762796 4762820 TGACGAGTTCGCAAA CTTGAGGTCACA AAA TGTGACCTCAAG TTTGCCGCATGGCGG TERM 3159 4762796 - 4762822 + H 100 -18.2 -3.55444 | opp_overlap 4762796, overlap 4762820 TGACGAGTTCGCAAA CTTGAGGTCACA AAA TGTGACCTCAAG TTTGCCGCATGGCGG TERM 3160 4763365 - 4763419 + G 72 -14.2 -3.14931 | opp_overlap 4763357 4763411, overlap 4763403 4763404 TGGAAACCGGCGGGG GCGAGGGGCTGCTGGCGACGCTCAAG GAC CTTGAGCGTCCCTAGAACCCGTGCGC TTCCTACGGAATCGA Caul_4388 4762812 - 4763408 + | hypothetical protein TERM 3161 4763403 - 4763447 + T 100 -20.1 -5.0925 | opp_overlap 4763411, overlap 4763365 4763404 AAGGACCTTGAGCGT CCCTAGAACCCGTGCGCTTCC TAC GGAATCGAACGGGTTCTAGGA TTTTTGCTTTTACGC TERM 3162 4763404 - 4763446 + T 100 -23.6 -3.64465 | opp_overlap 4763411, overlap 4763365 4763403 AGGACCTTGAGCGTC CCTAGAACCCGTGCGCTTCC TAC GGAATCGAACGGGTTCTAGG ATTTTTGCTTTTACG TERM 3163 4763439 - 4763411 - T 74 -13.1 -3.29144 | opp_overlap 4763365 4763404 4763403 TGAGCGTCCCTAGAA CCCGTGCGCTTCC TAC GGAATCGAACGGG TTCTAGGATTTTTGC Caul_4389 4765355 - 4763514 - | arginyl-tRNA synthetase TERM 3164 4764012 - 4764048 + g 70 -12.3 -3.28924 | gap 2, opp_overlap 4764008 CTCTTGCGAAAGCTC GGCCC-CGAG-GCCAGC TTCGC GCAGGCGCTCGCGGGCC TTCTCGCGGGCCATC TERM 3165 4764636 - 4764648 + g 75 -6.9 -4.42238 | CTGCAGTTCGGCGGT GGCCT TGC GGGCC TTTTCCTTGAACTCG Caul_4390 4766068 - 4765352 - | hypothetical protein Caul_4391 4766264 - 4767235 + | hydroxymethylbutenyl pyrophosphate reductase Caul_4392 4767624 - 4767232 - | death-on-curing family protein Caul_4393 4767848 - 4767621 - | addiction module antidote TERM 3166 4768738 - 4768758 + G 71 -10.3 -3.71848 | overlap 4768742 GCCATCCCGATCCTG GCGCGCGGC GCG GCCATGCGC TTCTTCCTGACCCGC Caul_4394 4767931 - 4768893 + | homoserine kinase Caul_4395 4768890 - 4769354 + | ribonuclease H Caul_4396 4770128 - 4769400 - | cyclic nucleotide-binding protein TERM 3167 4770337 - 4770312 - H 72 -11.9 -3.30124 | gap 1 CCCCACCTTCGAGAA CCGTGATCGCGA AGT CCGCGATC-CGG AACAAGCGTGCCGGG Caul_4397 4770406 - 4770582 + | hypothetical protein Caul_4398 4770802 - 4771602 + | hypothetical protein TERM 3168 4771604 - 4771660 + F 83 -15.8 -3.20382 | gap 1 CCGTGGTCGGCTGAG GCCGGGGCGGCGCGGTCCGCCTGAC CCTGAGCC GTCAGA-GGGCCTCGACGCTCCGGC TTGATCCCTATCAAG Caul_4399 4771773 - 4772204 + | OsmC family protein Caul_4400 4772227 - 4772613 + | hypothetical protein Caul_4401 4772727 - 4773662 + | hypothetical protein Caul_4402 4774152 - 4773727 - | rhodanese domain-containing protein TERM 3169 4775021 - 4775048 + G 74 -13.4 -3.28712 | gap 1 CGCCGCTTCGAGGCC GCCA-CGGGCCTG ACC CCGGCCCGCTGGC TTCTGGCGCAACGCC Caul_4403 4774223 - 4775224 + | transcriptional activator FtrA TERM 3170 4775337 - 4775354 + T 77 -14.1 -3.30124 | overlap 4775290 4775318 CGGTCCCGGATCTGC GCCCGGC TTTC GCCGGGC TTGTCCGGGATGACA TERM 3171 4775433 - 4775403 - T 91 -19.1 -3.01712 | overlap 4775388 4775412 TGGCGCCGCCGAAGA GGGGAGACACGAG GCGGA CCCGTGTCTCCCC GGCGACCGCCTCAGG TERM 3172 4775659 - 4775638 - T 91 -11.6 -4.25104 | CTCCTGGGACGAAAA GGCGGAAC CTGTTC GTTCCGCC TCGAACAGACGCCAG TERM 3173 4775939 - 4775897 - T 83 -7.6 -4.57569 | opp_overlap 4775896 4775902, overlap 4775899 CCAGCGTCCTAAAAA GCGCAGCGTCCGTGCC CCTCCCCCCTC GGCACGGGCGCTGTTC GCGTTTTGGGGGCGG TERM 3174 4775976 - 4775995 + T 70 -10.6 -3.54424 | opp_overlap 4775973, overlap 4775980 4775993 CGAGATCCAGAACGG CCCGGCGC CTGA GCGCCGCG TTTCCGGCGCTCCCG TERM 3175 4775980 - 4776028 + T 72 -11.7 -3.30124 | gap 2, opp_overlap 4775973, overlap 4775976 4775993 4776026 ATCCAGAACGGCCCG GCGCCTGAGCGCCGCGTTTCCGG CGCTC CCGGATCGGCG-CGCT-AGGCGC TTGTCCGGGATGACC Caul_4404 4776704 - 4776063 - | TetR family transcriptional regulator Caul_4405 4776838 - 4778181 + | cytochrome P450 Caul_4406 4778185 - 4779288 + | hypothetical protein TERM 3176 4779532 - 4779587 + G 71 -10.2 -3.75024 | gap 1, overlap 4779563 CCGTCCACGGCCATG CGCCCGTTCC-GCAGGCCATCGCGCTT GAG GAGGACGGCGGCCCGCTGGAGCGGCCG TTCTTCCTGATGGAG Caul_4407 4779285 - 4780307 + | aminoglycoside phosphotransferase Caul_4408 4780370 - 4780801 + | hypothetical protein Caul_4409 4780916 - 4781143 + | hypothetical protein Caul_4410 4781287 - 4782210 + | ABC transporter related Caul_4411 4782207 - 4782968 + | ABC-2 type transporter Caul_4412 4783059 - 4783841 + | short-chain dehydrogenase/reductase SDR Caul_4413 4783976 - 4784113 + | hypothetical protein TERM 3177 4784154 - 4784123 - f 100 -18.8 -4.69053 | GATTAGCCAATAAAA TCCGCTCATCCGGC CTTC GCGGGATGAGCGGA AGCGGGCGCTGCCCT Caul_4414 4784230 - 4785195 + | 2-nitropropane dioxygenase NPD TERM 3178 4785247 - 4785280 + T 74 -12.4 -3.53012 | overlap 4785235 4785234 TCTGTCCGCCCCCAT GGGGGCGGAGCCTT TGGCGC GAGGCTCTTCCCCC TTTGGGGGAGGAGGG Caul_4415 4786093 - 4785338 - | CRP/FNR family transcriptional regulator Caul_4416 4786225 - 4786773 + | hypothetical protein Caul_4417 4787284 - 4787075 - | hypothetical protein Caul_4418 4787460 - 4787900 + | hypothetical protein Caul_4419 4787949 - 4788908 + | band 7 protein Caul_4420 4788914 - 4789369 + | hypothetical protein TERM 3179 4789370 - 4789408 + T 100 -12.5 -4.7373 | gap 1, overlap 4789371 CTGACGGTTCGGTGA GCGACCGGGGA-CATGCA CGCG TGCATGGTCCCCGATCGG TTTTTCCTGGCCTAG TERM 3180 4789371 - 4789407 + T 89 -16 -3.43756 | gap 1, overlap 4789370 TGACGGTTCGGTGAG CGACCGGGGA-CATGCA CGCG TGCATGGTCCCCGATCG GTTTTTCCTGGCCTA Caul_4421 4790199 - 4789420 - | dihydropteroate synthase Caul_4422 4790858 - 4790388 - | hypothetical protein TERM 3181 4790955 - 4790920 - R 100 -20.6 -4.03234 | opp_overlap 4790926, overlap 4790926 CCCGGGCGAGACAAA GAAAAAGCCGGATCGG CGAA CCGATCCGGCTTCTCC AGGCCTTCGAAGGCC TERM 3182 4790926 - 4790949 + r 93 -18.2 -3.30159 | opp_overlap 4790920 4790926 CGAGACAAAGAAAAA GCCGGATCGG CGAA CCGATCCGGC TTCTCCAGGCCTTCG TERM 3183 4790949 - 4790926 - R 100 -18.2 -5.42975 | opp_overlap 4790926, overlap 4790920 CGAGACAAAGAAAAA GCCGGATCGG CGAA CCGATCCGGC TTCTCCAGGCCTTCG Caul_4423 4792857 - 4790977 - | ATP-dependent metalloprotease FtsH TERM 3184 4792040 - 4792097 + g 82 -13.5 -3.76224 | gap 4, overlap 4792047 TGATTCAGCGTCTGC TCG-CGCTCGTCGTTGCCGCCGCCCAGGC CCGC GCCACGGTGGCGGC--CGACG-GCGTCGA TTTCGTCGATGAAGA TERM 3185 4792047 - 4792093 + g 73 -16.5 -2.68279 | gap 1, overlap 4792040 GCGTCTGCTCGCGCT CGTCGTT-GCCGCCGCCCAGGC CCGC GCCACGGTGGCGGCCGACGGCG TCGATTTCGTCGATG Caul_4424 4794301 - 4792934 - | tRNA(Ile)-lysidine synthetase TERM 3186 4793264 - 4793235 - G 78 -12.1 -3.7108 | gap 1, overlap 4793237 ACGGGGAGAGCCAAA TAGCC-CCTCCCCC CGT GGGGGAGGCGGCCC GAAGGGCCGGTGGGG TERM 3187 4793262 - 4793237 - G 84 -16.9 -3.43773 | gap 1, overlap 4793235 GGGGAGAGCCAAATA GCC-CCTCCCCC CGT GGGGGAGGCGGC CCGAAGGGCCGGTGG TERM 3188 4793328 - 4793348 + g 74 -12.5 -3.60098 | overlap 4793329 GTCGGCTGCGCCGAC ACCTCCCCC ACA GGGGGAGGC TTTGACCTGCGGGCT TERM 3189 4793329 - 4793347 + g 74 -16 -2.75844 | overlap 4793328 TCGGCTGCGCCGACA CCTCCCCC ACA GGGGGAGG CTTTGACCTGCGGGC TERM 3190 4793667 - 4793612 - G 95 -22 -3.07816 | gap 1, opp_overlap 4793644, overlap 4793617 4793635 CCCGGACGTAGCGAA GCGAAGATCCGGGACCGTC-GAAAGCA CGG CGCTCCGGGTCGGTCCCGGATCTTCGC GCTGTGCGCTCGTCC TERM 3191 4793662 - 4793617 - G 72 -13.3 -3.19371 | gap 1, opp_overlap 4793644, overlap 4793612 4793635 ACGTAGCGAAGCGAA GATCCGGGACCGTC-GAAAGCA CGG CGCTCCGGGTCGGTCCCGGATC TTCGCGCTGTGCGCT Caul_4425 4795282 - 4794431 - | tol-pal system protein YbgF TERM 3192 4795530 - 4795492 - R 90 -8.7 -4.82667 | opp_overlap 4795491 4795494, overlap 4795493 4795494 4795522 GGATGACAGCAAAAA GGGTGCGCCCTTCCCCG GATCG CGAAGAAGGGCGCTCTA GCTTTTACCGCGCGC TERM 3193 4795529 - 4795493 - R 74 -12.2 -3.48877 | opp_overlap 4795491 4795494, overlap 4795492 4795494 4795522 GATGACAGCAAAAAG GGTGCGCCCTTCCCCG GATCG CGAAGAAGGGCGCTCT AGCTTTTACCGCGCG TERM 3194 4795528 - 4795494 - R 78 -15.7 -2.68603 | opp_overlap 4795491 4795494, overlap 4795493 4795492 4795522 ATGACAGCAAAAAGG GTGCGCCCTTCCCCG GATCG CGAAGAAGGGCGCTC TAGCTTTTACCGCGC Caul_4426 4796092 - 4795535 - | peptidoglycan-associated lipoprotein TERM 3195 4795604 - 4795616 + g 75 -6.2 -4.42238 | CTCTTCGCCCGAACC GCCG TCGAT CGGC TTTTCCTTGCCGTAC TERM 3196 4796289 - 4796243 - R 86 -16 -3.15579 | gap 1, opp_overlap 4796233 TGAACGTCGGATGAA CGACTTTACGGCAACGCGCGG TCATGG CGGCG-GTTGCCGGAAAGTCG CGTGGGTCAATCCAG Caul_4427 4797621 - 4796296 - | translocation protein TolB Caul_4428 4798448 - 4797636 - | hypothetical protein Caul_4429 4799098 - 4798577 - | protein TolR TERM 3197 4799020 - 4799078 + g 81 -18.8 -2.71144 | gap 3 TGATCTCGGACAGGG CGCCCCTGCC-CCGCCGGCCG-CGACGGC GACG GCCG-CGACGGCCGCCGGTGGCGAAGGCG TCGTTGGCGGACATG Caul_4430 4799801 - 4799103 - | protein TolQ Caul_4431 4801207 - 4799978 - | hypothetical protein Caul_4432 4801467 - 4801204 - | hypothetical protein Caul_4433 4801838 - 4801599 - | transcription factor TERM 3198 4801902 - 4801938 + r 91 -18.8 -3.05816 | gap 1, opp_overlap 4801869 4801907, overlap 4801907 AACTCGCGGCCAAAC GCAAAGCGGGCGCTGGA TCGC TCCAGCGCCCGCTC-GC TTGGCTCGGAAGTCG TERM 3199 4801934 - 4801907 - R 100 -22.8 -3.84451 | opp_overlap 4801902 4801907 GCGGCCAAACGCAAA GCGGGCGCTGGA TCGC TCCAGCGCCCGC TCGCTTGGCTCGGAA TERM 3200 4801907 - 4801934 + r 100 -22.8 -2.54896 | opp_overlap 4801907, overlap 4801902 GCGGCCAAACGCAAA GCGGGCGCTGGA TCGC TCCAGCGCCCGC TCGCTTGGCTCGGAA Caul_4434 4802649 - 4801960 - | 50S ribosomal protein L1 TERM 3201 4802382 - 4802413 + g 74 -16.6 -2.70932 | gap 1, overlap 4802381 CGCCGACGTGTTCAG CGCCAGCGGCGGTCG CTT CGGCCGCC-TTGGCG TCCTTGGCGAAGACG Caul_4435 4803085 - 4802654 - | ribosomal protein L11 TERM 3202 4803224 - 4803200 - R 74 -13.5 -2.89447 | overlap 4803197 GGCTAACGACAAGCA CGCCCCGGGAC AGG GTCCTGGAGCG AGGCGCGGCATGTAG TERM 3203 4803348 - 4803304 - R 79 -8.5 -4.3208 | opp_overlap 4803304 4803320 4803321, overlap 4803298 4803297 CCCGAGAAGCGAAAA CCTCGTCCTTCGACAAGCTCA GGA TGAGGTTTTCGACTGCCGAGG CCTGCGCAATGGTCC Caul_4436 4804390 - 4803410 - | short-chain dehydrogenase/reductase SDR TERM 3204 4804483 - 4804442 - H 76 -10.1 -3.83026 | opp_overlap 4804443 4804469, overlap 4804425 4804443 4804467 GTCCGCGAGATTAAA TGGAGGACGGCTCCGGATA TATA TATTCGGAGGCACCCTCCG TTTTTCAAGAGCGCG TERM 3205 4804482 - 4804443 - H 74 -13.6 -2.89602 | opp_overlap 4804443 4804469, overlap 4804425 4804442 4804467 TCCGCGAGATTAAAT GGAGGACGGCTCCGGATA TATA TATTCGGAGGCACCCTCC GTTTTTCAAGAGCGC TERM 3206 4804469 - 4804483 + H 95 -11.4 -4.56597 | opp_overlap 4804443 4804442 4804467, overlap 4804443 CCGGATATATATATT CGGAGG CAC CCTCCG TTTTTCAAGAGCGCG Caul_4437 4804499 - 4805077 + | TetR family transcriptional regulator Caul_4438 4805561 - 4805100 - | GCN5-related N-acetyltransferase Caul_4439 4805913 - 4805608 - | hypothetical protein Caul_4440 4806150 - 4807355 + | saccharopine dehydrogenase Caul_4441 4807363 - 4808535 + | Orn/DAP/Arg decarboxylase 2 TERM 3207 4808613 - 4808576 - T 100 -18.5 -4.11216 | opp_overlap 4808583, overlap 4808577 4808583 GCTCCAGGCCGAAAA GCAAAAACCCCGCGCCG TCGC CGACGCGGGGTTTTCGA AAGCTCGGCGATCAG TERM 3208 4808612 - 4808577 - T 100 -22 -3.06515 | opp_overlap 4808583, overlap 4808576 4808583 CTCCAGGCCGAAAAG CAAAAACCCCGCGCCG TCGC CGACGCGGGGTTTTCG AAAGCTCGGCGATCA TERM 3209 4808583 - 4808606 + T 95 -15.2 -4.08767 | opp_overlap 4808577 4808576 4808583 GCCGAAAAGCAAAAA CCCCGCGCCG TCGC CGACGCGGGG TTTTCGAAAGCTCGG TERM 3210 4808606 - 4808583 - T 100 -17.4 -5.0925 | opp_overlap 4808583, overlap 4808577 4808576 GCCGAAAAGCAAAAA CCCCGCGCCG TCGC CGACGCGGGG TTTTCGAAAGCTCGG Caul_4442 4809196 - 4808639 - | transcription antitermination protein NusG Caul_4443 4809519 - 4809205 - | preprotein translocase, SecE subunit TERM 3211 4809425 - 4809479 + g 80 -16.9 -3.1552 | gap 1, overlap 4809451 GCGGCCGGAGCCTTG GCCGCCGCCGCCTGACCGGCGGGCGC GAGC GCCGCCGCCGTCTTGGCGGCG-CGGC TCTTGATCGCTGACG TERM 3212 4809451 - 4809481 + g 77 -14.6 -3.18264 | overlap 4809425 CTGACCGGCGGGCGC GAGCGCCGCCGCCG TCT TGGCGGCGCGGCTC TTGATCGCTGACGGG TERM 3213 4809747 - 4809708 - R 83 -14.2 -3.44146 | opp_overlap 4809711 4809712, overlap 4809711 CTTTCCGACAATGAA CATCGCGCCGGTAGGCTC TTTG AAGCCCGCCAGCGCGTTG GTCTCATCGCCAGAG TERM 3214 4809711 - 4809744 + r 72 -11.6 -3.29471 | opp_overlap 4809708 4809711, overlap 4809712 TCCGACAATGAACAT CGCGCCGGTAGGCT CTTTGA AGCCCGCCAGCGCG TTGGTCTCATCGCCA TERM 3215 4809744 - 4809711 - R 74 -14.5 -2.57274 | opp_overlap 4809711 4809712, overlap 4809708 TCCGACAATGAACAT CGCGCCGGTAGGCTC TTTG AAGCCCGCCAGCGCG TTGGTCTCATCGCCA TERM 3216 4809784 - 4809812 + r 72 -11.6 -3.33261 | overlap 4809785 4809800 CGTTTAGCAGGGTCG TTCGAGCCGGGC AAGCG GCCCGGCGCGGG TTCTGAACGTTCGGG Caul_4444 4810532 - 4810146 - | hypothetical protein TERM 3217 4810497 - 4810512 + g 71 -11.8 -3.55622 | opp_overlap 4810495 TAACGCTAACAGACT GGCCGC CGCG GCGGCC TTTACGAACCTTACC TERM 3218 4810756 - 4810766 + H 88 -8.2 -4.74103 | overlap 4810755 GTCGCTTCAGGGCCG GGGC GAC GCCC TTTTTGAATTCCGCG Caul_4445 4810816 - 4811667 + | oxidoreductase FAD/NAD(P)-binding subunit Caul_4446 4811958 - 4812422 + | CopG family transcriptional regulator Caul_4447 4812422 - 4813246 + | hypothetical protein Caul_4448 4813252 - 4813878 + | hypothetical protein TERM 3219 4815803 - 4815827 + G 74 -12.7 -3.61398 | opp_overlap 4815782 GACCATCCGCGTCCT GCCCGGCCCGC ACG GCGCGCCGGAC TTCTTCACCCCGGCC TERM 3220 4816238 - 4816258 + G 95 -18.3 -3.5393 | overlap 4816253 CCGACCCTTCGGGTC GCCTCCCCC ACG GGGGGAGGC TTTGAGCCAGGTCAT TERM 3221 4817284 - 4817229 - g 78 -16 -3.05384 | gap 1, opp_overlap 4817254, overlap 4817213 GCCGGCGGCATCGAA GCCTTCCAGACCACGCGCCAGGCCGCC TTC GACG-CCGAGCGCGCCGACTGGGAGGC CAGGGGCGAGTTCGC Caul_4449 4813887 - 4817603 + | urea carboxylase TERM 3222 4818055 - 4818103 + G 74 -14.3 -3.35679 | GGCCTATGTCAGCGG CGGGTCCAGCTCCGGCTCGGCGG TGG CCGTCGCGGCGGGGCTGGTGGCG TTCTCGCTGGGCACC Caul_4450 4817600 - 4819474 + | amidase Caul_4451 4819653 - 4819964 + | hypothetical protein TERM 3223 4819997 - 4820011 + T 78 -3.4 -5.07652 | ACCTGATTGCATCAG GCCGGG GCT CTAGGC TTTTGTTTTAACGCA Caul_4452 4820829 - 4820068 - | ABC transporter related Caul_4453 4821662 - 4820844 - | binding-protein-dependent transport systems inner membrane component Caul_4454 4822906 - 4821797 - | ABC transporter periplasmic binding protein, urea carboxylase region TERM 3224 4822790 - 4822814 + g 83 -14.9 -3.56937 | overlap 4822786 GTCGGTCTTGACGGC GGCGGGCGCCG GCG CGGCGGCCGTC TTGGTTTCGGTCTTG TERM 3225 4823076 - 4823094 + H 76 -9.5 -4.07568 | GTCCCATCACGCCCC GTCGCGC GGCCG GCGCGGC TTTTCAACGCCGCGG Caul_4455 4823363 - 4824598 + | molybdenum cofactor synthesis domain-containing protein Caul_4456 4824637 - 4825182 + | hypothetical protein Caul_4457 4825285 - 4825662 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3226 4826303 - 4826348 + G 85 -17.5 -3.14881 | gap 1 GACCACCGGCGCCAG CGTCACCGACGCGGCGCTCGCC AGC GGCTATCGCAGCGTCGG-GGCG TTCATCGGGGCCTTC Caul_4458 4825659 - 4826408 + | AraC family transcriptional regulator Caul_4459 4826532 - 4828457 + | polysaccharide biosynthesis protein CapD TERM 3227 4830371 - 4830425 + G 89 -18.5 -3.37796 | overlap 4830373 TGACGTCGCCCGCTA CCGGGCCGACGGGGCCGA-CGGCGTGC TGC GCAAGCCGATCGACACCG-CGGCCCTG TTCTCGCTGCTGGCG TERM 3228 4830373 - 4830423 + G 91 -19.7 -3.25896 | overlap 4830371 ACGTCGCCCGCTACC GGGCCGACGGGGCCGA-CGGCGTGC TGC GCAAGCCGATCGACACCG-CGGCCC TGTTCTCGCTGCTGG Caul_4460 4828671 - 4830494 + | integral membrane sensor hybrid histidine kinase Caul_4461 4833946 - 4830593 - | DNA polymerase III, alpha subunit TERM 3229 4831449 - 4831494 + g 74 -14.7 -3.08173 | gap 1, opp_overlap 4831417 4831451 4831469, overlap 4831451 AGCGCGGAGCGCGAA GATCCGGGACCG-CCGGAAACG CGG CGCTCTGGGTCGGTCCCGGATC TTCGCTGCGCTTCGT Caul_4462 4835653 - 4834076 - | hypothetical protein TERM 3230 4835056 - 4835030 - GR 80 -14.4 -3.12351 | overlap 4835015 TTGGCCGACATGGAA CAGGCCCAGGCG CGG CAGCTGGGCCTG GCCCGCCTCGTCCAG TERM 3231 4835540 - 4835560 + gr 100 -18.3 -3.59979 | opp_overlap 4835540 GGGCGGGAGTATAAA GCCTCCCCC ATG GGGGGAGGC TTTGACCTCAGCCGA TERM 3232 4835560 - 4835540 - GR 100 -18.3 -3.96148 | opp_overlap 4835540 GGGCGGGAGTATAAA GCCTCCCCC ATG GGGGGAGGC TTTGACCTCAGCCGA Caul_4463 4836347 - 4835568 - | hypothetical protein Caul_4464 4836467 - 4839670 + | pyruvate carboxylase., methylmalonyl-CoA carboxytransferase TERM 3233 4840176 - 4840230 + G 79 -15 -3.28712 | gap 2 ATCTTCGGGGTGTTC TGC-CGGC-GCTGGGGCGTGCCGCTG ATCGA CGGCGGCACGGTGCGGCTGCCGCGCA TTGTCGGCCAGGGCC Caul_4465 4839795 - 4840553 + | enoyl-CoA hydratase Caul_4466 4841044 - 4840679 - | hypothetical protein TERM 3234 4841258 - 4841225 - R 100 -19.6 -4.4078 | opp_overlap 4841224 4841221 TCGCGGTAACGAAAA CCGCCGCGCCCAGC GGTCAG GCTGGACACGGCGG ATACTTCTTAGAGAC Caul_4467 4842913 - 4841333 - | D-3-phosphoglycerate dehydrogenase TERM 3235 4842957 - 4843008 + r 82 -14.5 -3.28712 | gap 1, overlap 4843004 4843005 CTCGTCCTTCGACAG GCTCAGGATGAGGGCTACCGATGC GTGGG GTTCCGGAA-CCCTCATCCTGAGC TTGTCGCCAAGCACC Caul_4468 4844244 - 4843057 - | phosphoserine aminotransferase TERM 3236 4844106 - 4844143 + g 72 -8.3 -3.97406 | gap 1, overlap 4844107 CCTTGAGGCGCGCCT TGCCGAGCTTGGAACGGT GCG ACCGGCCCA-GCACGGCG TTTCTCAGATTTTCG Caul_4469 4844805 - 4844380 - | hypothetical protein Caul_4470 4845198 - 4844863 - | hypothetical protein Caul_4471 4845369 - 4847252 + | integral membrane sensor hybrid histidine kinase TERM 3237 4847953 - 4847994 + G 74 -12.1 -3.53811 | gap 1, opp_overlap 4847915 GGACCGTTGGGCGCG CGACGG-CCTGAGCCGCGCG GAA CGCGCGGAGCTTGACCGTCG TTTCGACCGCATCAG Caul_4472 4847630 - 4848079 + | hypothetical protein Caul_4473 4848924 - 4848091 - | PhzF family phenazine biosynthesis protein TERM 3238 4848139 - 4848173 + g 74 -12.1 -3.66356 | gap 1, opp_overlap 4848140 4848159, overlap 4848140 CTCGATGATCGTGAA ACCGCGGC-CGCGC AGAAGAAC GCGCGCGCCGCGGC TTTCGCATTCCAGGT TERM 3239 4848172 - 4848140 - G 85 -16.3 -3.58343 | gap 1, opp_overlap 4848139 4848140, overlap 4848159 TCGATGATCGTGAAA CCGCGGC-CGCGCA GAAGAA CGCGCGCGCCGCGG CTTTCGCATTCCAGG TERM 3240 4848140 - 4848172 + g 70 -15.6 -2.79492 | gap 1, opp_overlap 4848140 4848159, overlap 4848139 TCGATGATCGTGAAA CCGCGGC-CGCGC AGAAGAAC GCGCGCGCCGCGG CTTTCGCATTCCAGG TERM 3241 4849047 - 4849030 - R 77 -14.1 -3.30124 | overlap 4849042 TGTCATCCCCGACAA CCCCGGC GAAA GCCGGGG GCAGATCCGGGACCG Caul_4474 4849730 - 4849134 - | hypothetical protein Caul_4475 4850506 - 4849727 - | phosphomethylpyrimidine kinase Caul_4476 4850983 - 4850588 - | PilT domain-containing protein Caul_4477 4851327 - 4850980 - | transcription factor TERM 3242 4851644 - 4851623 - g 71 -2.2 -4.65895 | gap 1, opp_overlap 4851635, overlap 4851624 4851625 4851627 CTGTCGACCGAAAAA CTGACGACG GTGCG CGACGTC-G ATGCGTTTGACGACG Caul_4478 4851350 - 4852747 + | FAD linked oxidase domain-containing protein TERM 3243 4852758 - 4852791 + T 100 -26.9 -3.60475 | opp_overlap 4852787 TCTAGCCTCTTTTGA TCCGCTCTTCCCGGC GAAG GCCGGGAAGAGCGGA TTTGGAATGGCGATT Caul_4479 4853154 - 4852816 - | hypothetical protein Caul_4480 4853257 - 4854024 + | hypothetical protein Caul_4481 4854121 - 4854918 + | 3-hydroxybutyrate dehydrogenase TERM 3244 4855095 - 4855085 - g 86 -6.8 -5.06414 | CCCGTTCAAGAAAAA GTCC AAC GGAC CCAAGCCGATCACCG TERM 3245 4855263 - 4855229 - g 72 -13.4 -3.14132 | GGCCGGGGCGATGAA CGCCGTCTGCCTGGCC CAG GGCCTGATCGACGGCG GCCCCACGGGCGGCC Caul_4482 4855059 - 4856132 + | patatin Caul_4483 4856176 - 4856637 + | NUDIX hydrolase TERM 3246 4856986 - 4857023 + G 88 -11.3 -4.42062 | gap 1, overlap 4856989 4856992 TCATTGGCCTCGCGG GACTGATCGGCACCGTCG TCA CGGCGGTGGCGA-CATTC TTTCTTTGGCGCGTC TERM 3247 4856989 - 4857020 + G 85 -11.6 -4.32678 | gap 1, overlap 4856986 4856992 TTGGCCTCGCGGGAC TGATCGGCACCGTCG TCA CGGCGGTGGCGA-CA TTCTTTCTTTGGCGC Caul_4484 4856940 - 4857653 + | hypothetical protein Caul_4485 4858056 - 4857850 - | hypothetical protein Caul_4486 4859018 - 4858128 - | Sua5/YciO/YrdC/YwlC family protein Caul_4487 4860361 - 4859036 - | YceI family protein TERM 3248 4860453 - 4860397 - R 76 -15.8 -2.52676 | gap 1 TATTTCTGGAATTCA CGCCCCACCACTCTCCGCCTTCCCGGC GAAG GCCGGGGAAACGGAG-GTGGAAAGGCT CAAATCCACAAATCC Caul_4488 4861226 - 4860468 - | YceI family protein Caul_4489 4861271 - 4863016 + | acyl-CoA dehydrogenase domain-containing protein Caul_4490 4863687 - 4863205 - | redoxin domain-containing protein Caul_4491 4863809 - 4864408 + | hypothetical protein TERM 3249 4864415 - 4864433 + F 71 -5.2 -4.40237 | opp_overlap 4864416, overlap 4864416 AGAGCTTGAGTAAAT ACCGGATG AAA TATCCGGG TTTTCCTCTATAATA Caul_4492 4864559 - 4865269 + | uncharacterized membrane-bound protein Caul_4493 4867156 - 4865489 - | diguanylate cyclase/phosphodiesterase Caul_4494 4867778 - 4867200 - | GCN5-related N-acetyltransferase Caul_4495 4868058 - 4868408 + | hypothetical protein TERM 3250 4868588 - 4868621 + T 72 -11.7 -3.29511 | gap 1 GATCTCACGTCTCAA CCGTCATCCCGGGACC GCG GGACC-GCGATGACGG TTCTAAAAAGATGGA Caul_4496 4869411 - 4868743 - | hypothetical protein Caul_4497 4870786 - 4869518 - | peptidase M16 domain-containing protein Caul_4498 4872377 - 4870980 - | threonine synthase Caul_4499 4873066 - 4872377 - | SurF1 family protein Caul_4500 4873436 - 4873059 - | hypothetical protein TERM 3251 4873495 - 4873545 + r 72 -11.8 -3.28712 | opp_overlap 4873479 4873478, overlap 4873478 CTCGTCCTTCGACGA GCTCAGGATGAGGATTTCTACGCG GAC CTCGCATTCGTCCTCATCCTGAGC TTGTCGAAGGACGAG TERM 3252 4873633 - 4873592 - R 100 -23.9 -4.56597 | opp_overlap 4873598, overlap 4873598 GGCGGGCTCCAAAAA CAAAAAGGCCCGGAACACC GCTT GGCGTTCCGGGCCTTCTCG AAGCGGATGATCTAG TERM 3253 4873598 - 4873627 + r 93 -19.3 -3.28924 | opp_overlap 4873592 4873598 CTCCAAAAACAAAAA GGCCCGGAACACC GCTT GGCGTTCCGGGCC TTCTCGAAGCGGATG TERM 3254 4873627 - 4873598 - R 100 -21.5 -5.61881 | opp_overlap 4873598, overlap 4873592 CTCCAAAAACAAAAA GGCCCGGAACACC GCTT GGCGTTCCGGGCC TTCTCGAAGCGGATG Caul_4501 4874520 - 4873645 - | cytochrome c oxidase subunit III Caul_4502 4875342 - 4874653 - | cytochrome C oxidase assembly protein Caul_4503 4875487 - 4875323 - | hypothetical protein Caul_4504 4876521 - 4875484 - | protoheme IX farnesyltransferase TERM 3255 4876549 - 4876595 + r 91 -17.9 -3.16177 | gap 1 TCTTCAGATCTTGAT GGGCGAAGGGCGCGGACTGGAC TTTC GTCCGGCCCGCGCCCC-CGCGC TTGCGTATCTAACGT Caul_4505 4878285 - 4876618 - | cytochrome c oxidase, subunit I Caul_4506 4879224 - 4878310 - | cytochrome c oxidase, subunit II Caul_4507 4879640 - 4879966 + | PadR-like family transcriptional regulator Caul_4508 4879963 - 4880529 + | hypothetical protein Caul_4509 4880540 - 4881352 + | hypothetical protein TERM 3256 4881369 - 4881402 + F 90 -18.3 -2.91593 | opp_overlap 4881374, overlap 4881374 CAGGCCGAGGCTTAT CAAAAGGCCGGAAGC GACA GCTTCCGGCCTTTTC CTTTATGCCCGCCTC TERM 3257 4881374 - 4881397 + F 100 -18.2 -4.61873 | opp_overlap 4881374, overlap 4881369 CGAGGCTTATCAAAA GGCCGGAAGC GACA GCTTCCGGCC TTTTCCTTTATGCCC TERM 3258 4881397 - 4881374 - f 100 -18.2 -4.26076 | opp_overlap 4881374 4881369 CGAGGCTTATCAAAA GGCCGGAAGC GACA GCTTCCGGCC TTTTCCTTTATGCCC Caul_4510 4881596 - 4883026 + | peptidase U62 modulator of DNA gyrase Caul_4511 4883059 - 4883658 + | cation efflux protein Caul_4512 4883824 - 4885863 + | TonB-dependent receptor plug Caul_4513 4886706 - 4885912 - | hypothetical protein TERM 3259 4886835 - 4886792 - R 77 -13 -3.5774 | opp_overlap 4886775, overlap 4886793 ATTCAAGGCTTGAAA GGGTTTCCCCGCCCGCTGGA ATCT TCCAACCGGCGGGGAGTCCT CGTCAAGTCGTCATG TERM 3260 4886834 - 4886793 - R 81 -16.5 -2.74322 | overlap 4886792 TTCAAGGCTTGAAAG GGTTTCCCCGCCCGCTGGA ATCT TCCAACCGGCGGGGAGTCC TCGTCAAGTCGTCAT Caul_4514 4887602 - 4886877 - | acetoacetyl-CoA reductase TERM 3261 4887629 - 4887681 + r 100 -18.5 -3.54424 | gap 1, overlap 4887630 GCTAAGTTTCTTATG GTTGCACG-CGGTGGACGGCGGGG GACAAG CCCCGCCGTCCACCGTCATGGAAA TTTGCCCAACTGGCG TERM 3262 4887630 - 4887680 + r 100 -22 -2.72511 | gap 1, overlap 4887629 CTAAGTTTCTTATGG TTGCACG-CGGTGGACGGCGGGG GACAAG CCCCGCCGTCCACCGTCATGGAA ATTTGCCCAACTGGC Caul_4515 4888889 - 4887714 - | acetyl-CoA acetyltransferase Caul_4516 4889110 - 4889790 + | polyhydroxyalkonate synthesis repressor, PhaR Caul_4517 4889977 - 4890312 + | hypothetical protein Caul_4518 4890632 - 4890309 - | hypothetical protein Caul_4519 4892150 - 4890879 - | acetyl-CoA acetyltransferase Caul_4520 4892790 - 4892365 - | hypothetical protein Caul_4521 4893759 - 4893022 - | glycosyl transferase family protein Caul_4522 4893816 - 4895522 + | glycosyl transferase family protein Caul_4523 4895519 - 4896424 + | pyruvate carboxyltransferase TERM 3263 4896462 - 4896425 - T 95 -16.3 -3.90744 | opp_overlap 4896427, overlap 4896427 TTTCCGGCCAAATAA TATCCGCTCACCCCGGC ATTC GCCGTGATGAGCGGATT TAATGCGATCTAGAT TERM 3264 4896460 - 4896427 - T 100 -18.9 -3.54488 | opp_overlap 4896427, overlap 4896425 TCCGGCCAAATAATA TCCGCTCACCCCGGC ATTC GCCGTGATGAGCGGA TTTAATGCGATCTAG TERM 3265 4896427 - 4896460 + T 93 -16.7 -3.75665 | opp_overlap 4896427 4896425 TCCGGCCAAATAATA TCCGCTCACCCCGGC ATTC GCCGTGATGAGCGGA TTTAATGCGATCTAG Caul_4524 4897398 - 4896472 - | glycosyl transferase family protein TERM 3266 4897357 - 4897335 - G 90 -16.2 -3.69323 | CCATGACCACCGAAA CGCGCGGCCG AAG CGGACGCGCG CCCGAGATGAAGGTC Caul_4525 4899377 - 4897398 - | threonyl-tRNA synthetase Caul_4526 4899628 - 4899374 - | hypothetical protein TERM 3267 4899714 - 4899677 - R 79 -9.7 -4.21462 | opp_overlap 4899679, overlap 4899679 ATCGACTAGCGAAAA GACCCGATCAAGCGGCG CCGA CGCGGCTAGTTCGGGTT TGGGTCGTCCCTGTG TERM 3268 4899712 - 4899679 - R 78 -12.3 -3.70674 | opp_overlap 4899679, overlap 4899677 CGACTAGCGAAAAGA CCCGATCAAGCGGCG CCGA CGCGGCTAGTTCGGG TTTGGGTCGTCCCTG TERM 3269 4899679 - 4899712 + r 78 -12.3 -3.68827 | opp_overlap 4899679 4899677 CGACTAGCGAAAAGA CCCGATCAAGCGGCG CCGA CGCGGCTAGTTCGGG TTTGGGTCGTCCCTG Caul_4527 4900145 - 4899684 - | NifU domain-containing protein Caul_4528 4900612 - 4900142 - | hypothetical protein Caul_4529 4902191 - 4900803 - | cysteinyl-tRNA synthetase TERM 3270 4901427 - 4901472 + g 75 -16.1 -2.87243 | gap 1, opp_overlap 4901438, overlap 4901424 GTTGTGCAGCCAGTA GTTGGCCAAGA-CCGGGGCGCC GTG GGCGCAGCGGCTCTGGGCCAGC TCGTTCTCGTGGTGC TERM 3271 4901586 - 4901616 + g 72 -5.3 -4.4078 | gap 1, overlap 4901590 CCAGCCCGGACGGCC CGCGCCCCAG-GGG CTGT CCCACTCGGGTTCG TTTTCCTTCGAAGGC Caul_4530 4902387 - 4903028 + | GTP cyclohydrolase I Caul_4531 4903265 - 4905094 + | peptidase M14 carboxypeptidase A Caul_4532 4905345 - 4905746 + | hypothetical protein TERM 3272 4906401 - 4906431 + G 74 -14.6 -3.01119 | GGGCTCGCAAGCCGC GCCCGTTCCGGCCG TCT CGGTCGGGGCCGGC TGTCTGTGGGTCGAT Caul_4533 4905877 - 4907658 + | FAD linked oxidase domain-containing protein Caul_4534 4907767 - 4909098 + | peptidase U62 modulator of DNA gyrase Caul_4535 4909095 - 4909880 + | inositol-phosphate phosphatase Caul_4536 4909905 - 4910129 + | hypothetical protein TERM 3273 4910160 - 4910140 - T 77 -12.5 -3.54543 | overlap 4910141 ACTGATCTTCCTAAA GCCTCCCCC TGT GGGGGAGGT GTCGGCGAAGCCGAC TERM 3274 4910159 - 4910141 - T 81 -16 -2.72511 | overlap 4910140 CTGATCTTCCTAAAG CCTCCCCC TGT GGGGGAGG TGTCGGCGAAGCCGA TERM 3275 4910254 - 4910274 + T 100 -18.3 -3.78775 | GATCGCTACGCGATC GCCTCCCCC ACG GGGGGAGGC TTTACTACTCCCGCC Caul_4537 4910944 - 4910279 - | protein tyrosine/serine phosphatase Caul_4538 4911083 - 4912873 + | ABC transporter related Caul_4539 4912870 - 4913586 + | hypothetical protein TERM 3276 4913691 - 4913642 - f 72 -7.2 -4.13014 | gap 3, overlap 4913683 CCCATAGGGGGAAAA GCCTCATGACTCCGGCTCCGCCCCC CAT GGGGGCGGA-C-AGA-CCGCGAAGC GGGCAGGTGGGGGCA Caul_4540 4913767 - 4914807 + | cation diffusion facilitator family transporter Caul_4541 4914822 - 4916072 + | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein Caul_4542 4916069 - 4917076 + | tetraacyldisaccharide 4'-kinase TERM 3277 4917104 - 4917084 - T 89 -12.5 -4.13767 | overlap 4917085 GGCTGTAGCTCAAAA GCCTCCCCC TGT GGGGGAGGT GTCGGCGAAGCCGAC TERM 3278 4917103 - 4917085 - T 84 -16 -3.08046 | overlap 4917084 GCTGTAGCTCAAAAG CCTCCCCC TGT GGGGGAGG TGTCGGCGAAGCCGA TERM 3279 4917199 - 4917219 + T 100 -18.3 -3.78934 | overlap 4917211 GATCGCTTCGCGATC GCCTCCCCC ACA GGGGGAGGC TTGTTCTCAAGCCCC Caul_4543 4918305 - 4917226 - | aminoglycoside phosphotransferase TERM 3280 4918405 - 4918388 - R 77 -14.1 -3.30124 | TGTCATCCCGGACAA GCCCGGC GTCA GCCGGGC GCGGATCCGGGACCG Caul_4544 4919773 - 4918487 - | phosphoribosylamine--glycine ligase TERM 3281 4919904 - 4919892 - H 85 -10.5 -4.27117 | GGCGGAGAAGACAAA GGCGC CCG GCGCC CAACCCCTATGCAAG Caul_4545 4920086 - 4921162 + | acyltransferase 3 TERM 3282 4921400 - 4921438 + T 78 -14.5 -3.04792 | gap 1 GCCACACCGTGCCCC ACGCAGGCAGCCCCGACC TCTC GGCTGGGGCTGCC-GCGA TGTTCAGGCTGATCC Caul_4546 4922150 - 4921458 - | two component transcriptional regulator Caul_4547 4922858 - 4922169 - | phosphate uptake regulator, PhoU Caul_4548 4923865 - 4922957 - | phosphate ABC transporter, ATPase subunit Caul_4549 4925172 - 4923871 - | phosphate ABC transporter, inner membrane subunit PstA Caul_4550 4926607 - 4925165 - | phosphate ABC transporter, inner membrane subunit PstC Caul_4551 4928154 - 4926712 - | histidine kinase Caul_4552 4928331 - 4931624 + | autotransporter beta-domain-containing protein TERM 3283 4931690 - 4931711 + F 100 -18.7 -5.13016 | opp_overlap 4931680 AACGACGATCGACCA GGCCCGCGC TTCG GCGCGGGCC TTTTTCGTTTTGATT Caul_4553 4931867 - 4933312 + | phosphate-selective porin O and P Caul_4554 4933434 - 4934486 + | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 3284 4934510 - 4934554 + F 100 -20.8 -3.6806 | gap 1, opp_overlap 4934489 4934486, overlap 4934511 CGGCCATCGACGCGC GGCGGCGGCGGCGGGAACCTC CCTG GAGGTTTCCGCCGCT-CCGCG TTTAGGTCAATGTCT TERM 3285 4934511 - 4934553 + F 100 -24.3 -2.80354 | gap 1, opp_overlap 4934489 4934486, overlap 4934510 GGCCATCGACGCGCG GCGGCGGCGGCGGGAACCTC CCTG GAGGTTTCCGCCGCT-CCGC GTTTAGGTCAATGTC TERM 3286 4935248 - 4935226 - g 91 -20.6 -3.28712 | GCTGCTGCTGCAGAA CCGCCGGGTC ACC GACCCGGCGG TGAAGGCCTCGCTGC Caul_4555 4934636 - 4935745 + | signal transduction histidine kinase Caul_4556 4935761 - 4936228 + | response regulator Caul_4557 4936246 - 4936506 + | hypothetical protein Caul_4558 4936658 - 4937572 + | acetylglutamate kinase TERM 3287 4937613 - 4937587 - f 73 -8.6 -4.08945 | overlap 4937590 AGGACTGGCGGAAAA GCACCCTCTCCC AGC AGGAGAGGGAGG GGCCCGCGCGAAGCG TERM 3288 4937610 - 4937590 - f 71 -13.3 -3.08211 | overlap 4937587 ACTGGCGGAAAAGCA CCCTCTCCC AGC AGGAGAGGG AGGGGCCCGCGCGAA TERM 3289 4937634 - 4937657 + F 74 -5.9 -4.52857 | overlap 4937635 GCGCGAAGCGTGGGA GGGTGAGGG ATTACG CCCTCGCCG TTTTCTCTCAGCGCT Caul_4559 4937760 - 4938428 + | pyrimidine 5'-nucleotidase Caul_4560 4938425 - 4939285 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Caul_4561 4939835 - 4939380 - | cupin 2 domain-containing protein Caul_4562 4939897 - 4941063 + | succinyl-diaminopimelate desuccinylase Caul_4563 4941063 - 4941500 + | hypothetical protein Caul_4564 4941649 - 4942569 + | glutaminase Caul_4565 4942662 - 4943240 + | NAD(P)H dehydrogenase (quinone) Caul_4566 4943437 - 4943556 + | hypothetical protein Caul_4567 4944309 - 4943560 - | tRNA pseudouridine synthase A Caul_4568 4945247 - 4944309 - | methionyl-tRNA formyltransferase Caul_4569 4945351 - 4945710 + | hypothetical protein Caul_4570 4946354 - 4945833 - | peptide deformylase TERM 3290 4946415 - 4946371 - R 90 -17.7 -3.06302 | opp_overlap 4946405, overlap 4946403 ATGAGTGTCAGGTAA GGGCCGCGCGCCCTGGGGTCA AGG CGACCGAAGGGCGCGGGGGCC TCCCGCCGGCGCTGC Caul_4571 4947855 - 4946560 - | hypothetical protein Caul_4572 4947972 - 4948844 + | hypothetical protein TERM 3291 4948870 - 4948906 + T 78 -11.6 -3.73224 | opp_overlap 4948890, overlap 4948890 GCTCAGCGCCGTGCT TGGTCCTCGTCCTTCG ACAAG CTCAGGATGAGGACCA TTTGATGGGCCATGC TERM 3292 4948944 - 4948890 - T 72 -11.6 -3.28712 | gap 1, opp_overlap 4948870 4948890 4948932, overlap 4948932 CTCGTCCTTCGACAA GCTCAGGATGAGGACCATTTGATGG GCCATG CCGTCGAA-AACCCTCATCCTGAGC TTGTCGAAGGACGAG Caul_4573 4949617 - 4949015 - | recombination protein RecR Caul_4574 4949948 - 4949619 - | hypothetical protein TERM 3293 4950045 - 4949988 - R 70 -12 -3.23274 | gap 2, opp_overlap 4949995 4950024, overlap 4949984 TCCCGGACAAGCGAA GCGCAGATTCGGGACCGCCG-G-AAGCG CCGG CGTTCACGCGTCGGTCCCGGATCTTCGC GCTGCGCGCTCGTCC Caul_4575 4951971 - 4950073 - | DNA polymerase III subunits gamma and tau Caul_4576 4952239 - 4953210 + | NUDIX hydrolase TERM 3294 4953280 - 4953229 - T 100 -11.7 -4.63218 | gap 2, opp_overlap 4953228 4953226 4953242, overlap 4953230 TCTTCTTGAAGAAAA TGGCTGTCATCCCGGATCGACGGCC CTCG AGCCTT-G-TCCGGGATGACAACCG CTCTTGATCGCCCCT TERM 3295 4953279 - 4953230 - T 84 -15.2 -3.3761 | gap 2, opp_overlap 4953228 4953226 4953242, overlap 4953229 CTTCTTGAAGAAAAT GGCTGTCATCCCGGATCGACGGCC CTCG AGCCTT-G-TCCGGGATGACAACC GCTCTTGATCGCCCC Caul_4577 4953710 - 4953294 - | hypothetical protein Caul_4578 4953845 - 4954225 + | putative transposase of insertion sequence ISRm2011-2, orfA protein Caul_4579 4954287 - 4954790 + | transposase and inactivated derivatives-like protein Caul_4580 4955809 - 4954961 - | prephenate dehydratase TERM 3296 4955273 - 4955294 + g 74 -10.9 -3.74526 | CTTGGCGTCGGCGGT CATCACCAG GAAT CTGGTGGTG TTGTTGCGTTCGTCC Caul_4581 4956546 - 4955806 - | 3-deoxy-manno-octulosonate cytidylyltransferase Caul_4582 4956717 - 4957403 + | cytochrome c class I TERM 3297 4957429 - 4957452 + F 100 -18.2 -5.27938 | overlap 4957447 TCCTTTCGAGATCGA GGCCGCGAAG TTCG CTTCGCGGCC TTTTTCTTTGCCGCT Caul_4583 4957572 - 4958102 + | thiol-disulfide isomerase Caul_4584 4959048 - 4958218 - | NLP/P60 protein Caul_4585 4960466 - 4959045 - | leucyl aminopeptidase TERM 3298 4959668 - 4959693 + g 88 -14.7 -3.71848 | TCCGGCCCAGGGCCA GGGCGTGGGCG GCGC CGCCCATGTCC TTCTTCATCAACCGC Caul_4586 4960553 - 4961362 + | TPR repeat-containing protein Caul_4587 4961453 - 4962703 + | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Caul_4588 4963106 - 4962906 - | hypothetical protein Caul_4589 4964093 - 4963431 - | peptidase S16 lon domain-containing protein Caul_4590 4965017 - 4964103 - | thioredoxin TERM 3299 4964814 - 4964826 + g 75 -10.5 -4.07568 | GACCGCCCCGCCCGC GGCGG CAA CCGCC TTTTCCAGGGCGGGG TERM 3300 4964958 - 4964996 + g 83 -9.4 -4.58395 | GCCGTCCTTGATATG CTCGCTCTTGCTCGCGCC GCC GGCGGGAATGGGGGCGGG TTTTTCGCCGATCAG Caul_4591 4965643 - 4965137 - | YbaK/prolyl-tRNA synthetase associated region Caul_4592 4966208 - 4965654 - | hypothetical protein Caul_4593 4966313 - 4967056 + | hypothetical protein Caul_4594 4967188 - 4967469 + | hypothetical protein Caul_4595 4967585 - 4968148 + | hypothetical protein Caul_4596 4968151 - 4968453 + | hypothetical protein TERM 3301 4968467 - 4968497 + T 95 -10.4 -4.56775 | opp_overlap 4968460, overlap 4968470 GATCAACACCCTCCC CAGCCCCCTCCC CGTACGT GGGAGGGGGTTC TTTTTCAGACCGCCT TERM 3302 4968470 - 4968494 + T 100 -14.3 -4.40561 | opp_overlap 4968460, overlap 4968467 CAACACCCTCCCCAG CCCCCTCCC CGTACGT GGGAGGGGG TTCTTTTTCAGACCG Caul_4597 4969848 - 4968502 - | phosphoglucosamine mutase Caul_4598 4970009 - 4971829 + | D-fructose-6-phosphate amidotransferase Caul_4599 4973529 - 4971868 - | carboxylesterase type B Caul_4600 4974854 - 4973526 - | major facilitator transporter TERM 3303 4974307 - 4974297 - G 70 -8.2 -3.86897 | overlap 4974298 GCCAGTGGCCAGAAA GGCG TCG CGCC AGCTGAACGCCGCCG Caul_4601 4976134 - 4974851 - | beta-lactamase TERM 3304 4975605 - 4975643 + g 72 -13.9 -3.14564 | gap 2 TGGGCGAGCGGCAGG CCGCC-GA-GCGCGGCCAG CCA CTGGTCGGGCGTCAGGCGG TTCATCGCCGGATCG Caul_4602 4978911 - 4976284 - | TonB-dependent receptor Caul_4603 4979106 - 4979828 + | TetR family transcriptional regulator Caul_4604 4981327 - 4979849 - | AMP-dependent synthetase and ligase TERM 3305 4981455 - 4981443 - R 71 -4.8 -4.50193 | overlap 4981452 ATGAATGAATGAAAA GCGA AATCA TCGC CGGCCAGCGAGGCCA Caul_4605 4982095 - 4981520 - | hypothetical protein Caul_4606 4983843 - 4982095 - | glucose-methanol-choline oxidoreductase TERM 3306 4983998 - 4983969 - H 72 -7.9 -4.19678 | gap 1 TTACATTGCAAGAAA GCTCGGCG-TTTCG CTG CAAAATCGCCGACC GACAGGGAGGACGAG Caul_4607 4984020 - 4984850 + | hypothetical protein TERM 3307 4984906 - 4984856 - T 93 -18.2 -3.25823 | opp_overlap 4984859, overlap 4984857 GGCGCGTTAGATCAA CTCCTGTCATCCCGGCCAAGCGCG AAG CGCGCCGAGCCGGGATGACAGTTT GAGATAGCCGTGCTC TERM 3308 4984905 - 4984857 - T 100 -21.7 -2.55351 | opp_overlap 4984859, overlap 4984856 GCGCGTTAGATCAAC TCCTGTCATCCCGGCCAAGCGCG AAG CGCGCCGAGCCGGGATGACAGTT TGAGATAGCCGTGCT TERM 3309 4984859 - 4984903 + T 100 -24.3 -3.60296 | opp_overlap 4984857 4984856 GCGTTAGATCAACTC CTGTCATCCCGGCCAAGCGCG AAG CGCGCCGAGCCGGGATGACAG TTTGAGATAGCCGTG Caul_4608 4985285 - 4984923 - | cytochrome c class I Caul_4609 4986367 - 4985312 - | xylose isomerase domain-containing protein Caul_4610 4987506 - 4986364 - | oxidoreductase domain-containing protein Caul_4611 4988483 - 4987506 - | xylose isomerase domain-containing protein Caul_4612 4989763 - 4988513 - | nucleoside:H symporter TERM 3310 4990874 - 4990832 - g 74 -16.2 -2.80935 | AGCCGATGGAGCAGA TCGGCCACGAGGTCGTGCGG CTG CTGCTCGACATCCTGGCCGA CCGGGCCAGCGCGCT Caul_4613 4989946 - 4990953 + | LacI family transcription regulator Caul_4614 4991729 - 4990950 - | hypothetical protein Caul_4615 4993046 - 4991850 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 3311 4992773 - 4992805 + g 78 -16.3 -3.02263 | gap 1 TCCTGGCGCGGGTCA GCGGCGTGCCGCGC TTGGGC GTGCGGC-CGCCGC TCTTGCCAACGATCT TERM 3312 4992995 - 4993024 + g 100 -15.9 -4.08064 | gap 1 AGCCGTTCGGCAGGT GGATGGTC-AGGTC GCC GACCTTGACCATCC TTTTCAGCAGAGCTT TERM 3313 4993047 - 4993076 + r 79 -13.6 -3.53012 | opp_overlap 4993036 4993063 CAGAGCTTCGATCAT GGCCGCGAAGCT AAACCC AGCTTCCCGGCC TTTGACAGACCGAAA Caul_4616 4994145 - 4993150 - | aldo/keto reductase Caul_4617 4994283 - 4995182 + | LysR family transcriptional regulator Caul_4618 4995393 - 4996421 + | aspartate-semialdehyde dehydrogenase TERM 3314 4996463 - 4996426 - f 91 -20.7 -2.62184 | opp_overlap 4996427 4996428, overlap 4996409 4996410 TCCCGGCCTAGACGA CCTTCGTCGTCCTCCGC CGGT GCGGAGGACGACGAAAT TTCCACCTTCGGGAC TERM 3315 4996427 - 4996462 + F 100 -22 -3.60792 | opp_overlap 4996409 4996410 4996426, overlap 4996428 CCCGGCCTAGACGAC CTTCGTCGTCCTCCGC CGGT GCGGAGGACGACGAAA TTTCCACCTTCGGGA TERM 3316 4996428 - 4996461 + F 100 -25.5 -2.76261 | opp_overlap 4996409 4996410 4996426, overlap 4996427 CCGGCCTAGACGACC TTCGTCGTCCTCCGC CGGT GCGGAGGACGACGAA ATTTCCACCTTCGGG Caul_4619 4996557 - 4997474 + | transporter DMT superfamily protein Caul_4620 4997588 - 4999000 + | EmrB/QacA family drug resistance transporter TERM 3317 4999017 - 4998985 - T 77 -14.1 -3.37796 | overlap 4998988 GCTGATGATCGAGAA GAAGCCGGCGCACTG ACG CCGTGCGCCAACCTC AAAGCGCCGAATAGG TERM 3318 4999014 - 4998988 - T 81 -12.2 -3.82824 | overlap 4998985 GATGATCGAGAAGAA GCCGGCGCACTG ACG CCGTGCGCCAAC CTCAAAGCGCCGAAT Caul_4621 5000143 - 4999016 - | beta-lactamase TERM 3319 5000199 - 5000247 + r 84 -15.6 -3.28712 | gap 2, opp_overlap 5000182 5000199, overlap 5000182 CTCGTCCTTCGACAA GCTCAGGATGAGGATTTCCTCGAG CAG CTC-AGTAG-TCCTCATCCTGAGC TTGTCGAAGGACGAG TERM 3320 5000247 - 5000199 - R 77 -13.4 -3.28712 | gap 2, opp_overlap 5000182 5000199, overlap 5000182 CTCGTCCTTCGACAA GCTCAGGATGAGGATTTCCTCGAG CAG CTC-AGTAG-TCCTCATCCTGAGC TTGTCGAAGGACGAG Caul_4622 5001121 - 5000273 - | pyridoxine kinase TERM 3321 5001420 - 5001397 - R 100 -17.4 -4.99134 | ACCCGAAACGAAAAA GCCCGCCGCG TTTC CGCGACGGGC CTCTCGCGCTTCACC Caul_4623 5002839 - 5001448 - | S-adenosyl-L-homocysteine hydrolase Caul_4624 5004486 - 5002954 - | adenylate cyclase Caul_4625 5004610 - 5005632 + | biotin synthase Caul_4626 5006076 - 5005798 - | phosphotransferase system, phosphocarrier protein HPr TERM 3322 5006057 - 5006075 + g 81 -4.4 -4.82901 | overlap 5006058 5006060 ACGATCTCGACCGTG CGCGTCGC CAT GCGACTCA TTTTTCTCCCGCGAG Caul_4627 5006480 - 5006073 - | PTS system fructose subfamily IIA component Caul_4628 5006990 - 5006556 - | HPr kinase TERM 3323 5006885 - 5006871 - G 79 -11.4 -3.99324 | GGCCACCAGCACAAA GCCCTG GTC CAGGGC GCGCACGGCTAGGTC Caul_4629 5008666 - 5006987 - | integral membrane sensor signal transduction histidine kinase Caul_4630 5009381 - 5008674 - | two component transcriptional regulator TERM 3324 5010953 - 5010908 - g 78 -13.2 -3.61398 | gap 1 GGGCGCGGTCAACAA GCGCATGGCC-GCCCGCTGGC TGTCG GCCAACGTCCTGGCCCTGCGC TTCGAGCGCGAACTG Caul_4631 5009634 - 5011343 + | hypothetical protein Caul_4632 5011524 - 5012228 + | hypothetical protein Caul_4633 5013679 - 5012507 - | DegT/DnrJ/EryC1/StrS aminotransferase Caul_4634 5014715 - 5013681 - | polysaccharide biosynthesis protein CapD Caul_4635 5014833 - 5015240 + | hypothetical protein Caul_4636 5015690 - 5015250 - | CMP/dCMP deaminase zinc-binding Caul_4637 5016151 - 5015726 - | PilT domain-containing protein Caul_4638 5016677 - 5016141 - | hypothetical protein Caul_4639 5016808 - 5018313 + | RNA-binding S4 domain-containing protein Caul_4640 5019290 - 5018355 - | abortive infection protein Caul_4641 5019416 - 5020048 + | hypothetical protein TERM 3325 5020244 - 5020260 + G 72 -5.7 -4.29325 | overlap 5020245 TGGGCCTGGAGGCGA TGTCGCG CGG CGCGGCC TTTTGCCTGTTCGTC TERM 3326 5020564 - 5020593 + G 93 -16.4 -3.9461 | GGCTTCGAGCGGCTC GACGCGCGCGAC TATGGC GCCGCGCGCGTC TTCTTCTTCCGCGCG Caul_4642 5020051 - 5020614 + | methyltransferase Caul_4643 5020894 - 5020619 - | hypothetical protein TERM 3327 5020946 - 5020925 - R 74 -13 -3.30243 | ATCGAGGCGTGAGAA CGCTCGCC GTCGCT GGCGAGCG GACGGATCGGGGCCT Caul_4644 5023175 - 5021226 - | AsmA family protein Caul_4645 5023523 - 5023419 - | hypothetical protein Caul_4646 5024043 - 5023600 - | hypothetical protein Caul_4647 5024186 - 5024827 + | HAD family phosphatase Caul_4648 5024857 - 5025147 + | pterin-4-alpha-carbinolamine dehydratase TERM 3328 5025258 - 5025203 - f 73 -6.7 -4.2558 | gap 3, overlap 5025205 5025207 5025208 CACGGGGGAGGAAAA GACATCGC--CGCTTCCTCCTCACCCGC GAA GCGGGGGAGGTGGC-GCGATGCGAAGAC GCGTCGTGACGGAGG TERM 3329 5025629 - 5025607 - g 75 -10.5 -4.08216 | CGAGGTGCTGGAAAA GGCCGCCGA GGCGA TGGGCGGCC TGTCGGTGCTGGTCA Caul_4649 5025362 - 5026147 + | short chain dehydrogenase TERM 3330 5026186 - 5026150 - T 91 -16.6 -3.59979 | overlap 5026153 TTCGGCGATGTGAAA CGAGCCGGC-CCTCCCCC CGT GGGGGAGGTGTCGGC-CG AAGGCCGACGGAGGG TERM 3331 5026184 - 5026153 - T 90 -18 -2.92613 | gap 1, overlap 5026150 GGCGATGTGAAACGA GCCGGC-CCTCCCCC CGT GGGGGAGGTGTCGGC CGAAGGCCGACGGAG TERM 3332 5026266 - 5026303 + T 75 -14.1 -3.05935 | gap 1, overlap 5026300 CCCCCACCGATCGCT GCGCG-ATCGCCTCCCCC ACA GGGGGAGGCCCTATGCGC TTACCTCGGCGCTCT Caul_4650 5026861 - 5026304 - | two component Fis family transcriptional regulator TERM 3333 5026919 - 5026907 - R 70 -7.7 -4.07687 | ACCTGGGCTCGAAAA CGACA TCA TGTCG CCTGATTCCTCTGGA Caul_4651 5028351 - 5026951 - | integral membrane sensor signal transduction histidine kinase Caul_4652 5028407 - 5029000 + | electron transport protein SCO1/SenC TERM 3334 5029022 - 5029004 - f 75 -11.6 -3.61398 | opp_overlap 5028989 5028987, overlap 5028982 GCCGGGCGGTAAGAA GCGCCCCG CGA CGCGGCGC CGCTACCGGAAGGCT Caul_4653 5029092 - 5030348 + | polyhydroxyalkanoate depolymerase, intracellular Caul_4654 5030595 - 5031314 + | hypothetical protein Caul_4655 5031669 - 5032796 + | hemolysin-type calcium-binding region Caul_4656 5032872 - 5033642 + | hypothetical protein Caul_4657 5033769 - 5034458 + | Hly-III family protein Caul_4658 5034466 - 5035782 + | patatin Caul_4659 5036104 - 5035772 - | hypothetical protein Caul_4660 5037169 - 5036174 - | hypothetical protein TERM 3335 5037281 - 5037314 + r 100 -16.7 -4.09511 | opp_overlap 5037285, overlap 5037285 GTTTGTTCCGAACGA AAAACGGCGGCGCGA TCAC TCGCGCCGCCGTTCA TTTTCAGGGAATCTT TERM 3336 5037310 - 5037285 - R 100 -21.9 -4.8622 | opp_overlap 5037281 5037285 GTTCCGAACGAAAAA CGGCGGCGCGA TCAC TCGCGCCGCCG TTCATTTTCAGGGAA TERM 3337 5037285 - 5037310 + r 100 -21.9 -3.66908 | opp_overlap 5037285, overlap 5037281 GTTCCGAACGAAAAA CGGCGGCGCGA TCAC TCGCGCCGCCG TTCATTTTCAGGGAA Caul_4661 5039189 - 5037339 - | ribonucleotide-diphosphate reductase subunit alpha TERM 3338 5039351 - 5039362 + r 100 -5.8 -5.4505 | opp_overlap 5039341 5039346, overlap 5039348 5039347 AACGACGAGATGCGC CTCG CGGG CGAG TTTTTTCTTAACAAG TERM 3339 5039643 - 5039620 - R 100 -21 -5.10933 | GCAGCCAAAAGAAAA GGGCCCGGCG TCGC CGCCGGGCCC TCAACTCAGGTCGTG Caul_4662 5040873 - 5039668 - | OmpA/MotB domain-containing protein TERM 3340 5041183 - 5041148 - R 76 -6 -4.59853 | gap 1, overlap 5041149 GCAAGCGTGCAAAAA TGTCGCAGATGCGCGCG ATC CGCGCGCA-CGACCACC CAGGGGCGCCGGATA Caul_4663 5042373 - 5041201 - | ABC-2 type transporter Caul_4664 5043326 - 5042370 - | ABC transporter related Caul_4665 5044309 - 5043323 - | secretion protein HlyD family protein TERM 3341 5044133 - 5044099 - G 74 -15.7 -3.04144 | gap 1 CGTCCAGGGCGAACA GCGGC-TGGCCAGCGA CGAC CCGCTGGCCCCGCCGC ACCGACACCGTGCTG Caul_4666 5044950 - 5044306 - | TetR family transcriptional regulator TERM 3342 5045035 - 5045018 - H 78 -10.5 -4.08216 | overlap 5045002 CGACGGTTGTCAAAA CCACGCG GCGC CGCGCGG CTGAAAATCCAACTT Caul_4667 5045246 - 5046742 + | beta-lactamase Caul_4668 5048701 - 5046917 - | sodium/hydrogen exchanger Caul_4669 5048988 - 5048737 - | hypothetical protein Caul_4670 5049413 - 5048985 - | hypothetical protein TERM 3343 5049050 - 5049072 + g 73 -9.8 -3.8211 | opp_overlap 5049045 CGACACCGAACCGCT GCGCGACCTT GCC GAAGTCGCGC TTGTTGTAGGTCACG TERM 3344 5049188 - 5049168 - G 90 -12.5 -4.41348 | overlap 5049170 GGGCCGCCAAAGAAA GGCCAGCCG AAC CGGCTGGGC CGTCGCCGCCACGGC TERM 3345 5049275 - 5049237 - G 82 -11 -4.18018 | gap 1, opp_overlap 5049231 GTCGCGGACTGAAAA GCCG-GAGGCCACGCGA TGCTCG TCGCGTGTCATCACGGC TTCGCATTCGATGAA TERM 3346 5049322 - 5049295 - G 76 -7.7 -4.25056 | gap 1 CATTCGATGAACAAA GGCGTCGAGACC AACAA GGTCA-GACGCC GCTCGAGTCCCGCCA Caul_4671 5049739 - 5049476 - | hypothetical protein TERM 3347 5050528 - 5050546 + G 71 -2.4 -4.65168 | gap 1, overlap 5050544 ATTGCCCTGGGCGTA GCGTTCG GCTCGG CGA-CGC TTTTTGGCGTGTCGT TERM 3348 5050927 - 5050905 - g 70 -15.6 -2.70932 | opp_overlap 5050922 GCTGCTGCCCAAGGA CGGCCAGGAC CTG ATCCTGGCCG GGGCCATCCTGTCGA Caul_4672 5049811 - 5051460 + | potassium efflux system protein Caul_4673 5051669 - 5052058 + | hypothetical protein Caul_4674 5052132 - 5054210 + | TonB-dependent receptor TERM 3349 5054510 - 5054458 - g 78 -9.7 -4.2349 | gap 1 CGTCGAGATCGAAAA GGCCGGCGAGAAGGCCAC-GGCCC TCACCT GGACCGGCCGCCTGCCCGACGACC AGTTCGACGACTTCG Caul_4675 5054225 - 5054725 + | nuclear export factor GLE1 Caul_4676 5054742 - 5055248 + | hypothetical protein Caul_4677 5055514 - 5055948 + | hypothetical protein TERM 3350 5056484 - 5056472 - f 74 -4.7 -4.58395 | GCGATCTGCCAAAAA GGCCC AAA GCGCC GGCCATCGCCCCTCC TERM 3351 5056537 - 5056522 - f 70 -7.5 -4.0014 | overlap 5056532 ATGACAAAAAAGTAA GGGGC GAAAAG GCCCC GGGGATGGCCAAGTC Caul_4678 5056542 - 5058710 + | endothelin-converting protein 1 TERM 3352 5058863 - 5058821 - T 70 -9.9 -3.55563 | gap 2, opp_overlap 5058829 5058830, overlap 5058829 5058830 AGGGCATGTCCCAAA CGCAAAAACGGCGGC--CCGC ATC GCGGATGCCGCCATTTTATCG AGTCTGTCAAAAATA TERM 3353 5058829 - 5058855 + T 76 -6.5 -4.4195 | gap 2, opp_overlap 5058821 5058829 5058830, overlap 5058830 TCCCAAACGCAAAAA CGGCGGC--CCGC ATC GCGGATGCCGCCA TTTTATCGAGTCTGT TERM 3354 5058855 - 5058829 - T 88 -8.7 -4.81249 | gap 2, opp_overlap 5058829 5058830, overlap 5058821 5058830 TCCCAAACGCAAAAA CGGCGGC--CCGC ATC GCGGATGCCGCCA TTTTATCGAGTCTGT TERM 3355 5058935 - 5058899 - T 71 -13 -3.00994 | opp_overlap 5058898 5058899, overlap 5058904 CGAACGCCAGATACA CCAAACCCGCCGCG GGGGATAAT CGCGACGGGTCCGG CTATTTCTCGATCAT TERM 3356 5058930 - 5058904 - T 76 -10.1 -3.91196 | opp_overlap 5058899 5058898, overlap 5058899 GCCAGATACACCAAA CCCGCCGCG GGGGATAAT CGCGACGGG TCCGGCTATTTCTCG TERM 3357 5059138 - 5059156 + T 72 -3.9 -4.62471 | gap 1, opp_overlap 5059138 GTGTGGTCAAACTTA TCG-CTGA TCTC TCAGACGA TTTTTGACGGTTCGG Caul_4679 5060144 - 5059149 - | ATP phosphoribosyltransferase Caul_4680 5061283 - 5060141 - | ATP phosphoribosyltransferase regulatory subunit Caul_4681 5062781 - 5061285 - | histidyl-tRNA synthetase TERM 3358 5063164 - 5063184 + H 78 -5.3 -4.8048 | opp_overlap 5063133 5063164 CCCCGCCTACAGGAA GCCCGCC CTCAACT GGCGAGC TTTTTCGTGTCAGCA Caul_4682 5063230 - 5064261 + | hypothetical protein Caul_4683 5064540 - 5064917 + | hypothetical protein Caul_4684 5064974 - 5065501 + | filamentation induced by cAMP protein Fic Caul_4685 5066201 - 5066413 + | hypothetical protein Caul_4686 5066453 - 5066704 + | hypothetical protein Caul_4687 5066856 - 5068904 + | TonB-dependent receptor TERM 3359 5068944 - 5068921 - T 70 -12.4 -3.14132 | opp_overlap 5068909, overlap 5068933 GGGGGCGGGGACGAA GGAGCGAGAC CACG GCCTCGCCCC TTCGACGGACCGGCT Caul_4688 5070583 - 5068964 - | glucose-6-phosphate isomerase TERM 3360 5070679 - 5070698 + H 83 -7.9 -4.56775 | AAACGGATACCGCCA CGTCATG AAGACC CATGACG TTTTTCGCGGGGAGT Caul_4689 5070719 - 5071210 + | hypothetical protein Caul_4690 5071319 - 5072056 + | hypothetical protein TERM 3361 5072102 - 5072125 + T 85 -14.6 -3.66356 | gap 1, overlap 5072102 GCGGCTGCGCCGCCT G-TCCGCCCCC ATA GGGGGCGGAGC TTTGCGCTTCAGGCT TERM 3362 5072102 - 5072124 + T 75 -14.8 -2.79492 | overlap 5072102 GCGGCTGCGCCGCCT GTCCGCCCCC ATA GGGGGCGGAG CTTTGCGCTTCAGGC Caul_4691 5074421 - 5072205 - | cytochrome c biogenesis protein transmembrane region TERM 3363 5073491 - 5073547 + g 79 -19.2 -2.66316 | gap 1, overlap 5073511 GCGAGAGGGTCTTGG CCGCCGC-CGGGGCGCCCAGCCCGCCG GCCC CGGCGGGGATCGCGCCCGGCGTGGCGG TGATCTCGTAAGCCG Caul_4692 5074503 - 5074895 + | hypothetical protein TERM 3364 5074992 - 5075039 + T 86 -6.8 -5.00616 | gap 1, opp_overlap 5074980, overlap 5075010 AAGCGCCTGCGTTCA CGCGTCGGCCCCCGATCGGCGCG CTG CGCGCTTGTCCGGGGT-GACAAG TTTTTTCCCGAGCCC TERM 3365 5075065 - 5075096 + T 83 -15.8 -3.14132 | opp_overlap 5075067, overlap 5075067 AGCCCGAACATAAAA AAGGCGGCGGACCC TTCC GGATCCGCCGCCTC TTCATACGCCCGAAG TERM 3366 5075094 - 5075067 - T 100 -20.6 -5.47159 | opp_overlap 5075065 5075067 CCCGAACATAAAAAA GGCGGCGGACCC TTCC GGATCCGCCGCC TCTTCATACGCCCGA TERM 3367 5075067 - 5075094 + T 91 -18.4 -3.13403 | opp_overlap 5075067, overlap 5075065 CCCGAACATAAAAAA GGCGGCGGACCC TTCC GGATCCGCCGCC TCTTCATACGCCCGA Caul_4693 5075915 - 5075121 - | SapC family protein Caul_4694 5078158 - 5076101 - | TonB-dependent receptor TERM 3368 5078038 - 5078079 + g 78 -13.5 -3.55622 | CGACGGCGGTGGGGC CGTCGGGGCCGTCCGGCGC GGCG GCGTCGGCCGGCGCTGGGG TTTCGGCGGCTTGAG Caul_4695 5078277 - 5079104 + | acid phosphatase Caul_4696 5080102 - 5079224 - | N-carbamoylputrescine amidase Caul_4697 5081109 - 5080099 - | agmatine deiminase TERM 3369 5081159 - 5081143 - R 81 -13.7 -3.5764 | opp_overlap 5081151 AACGGGAGGCGCAAA TGGGCCG AGA CGGCCCA CGGGTCAAGCCGTCC TERM 3370 5081200 - 5081233 + r 100 -15.3 -4.62783 | opp_overlap 5081205, overlap 5081205 GACCTGCGACAAAAG AAAAAGGGCGGTCCG TTTC CGGACCGCCCTTCTA TTTTTGACCTAGATG TERM 3371 5081228 - 5081205 - R 100 -19.6 -5.54907 | opp_overlap 5081205 5081200 GCGACAAAAGAAAAA GGGCGGTCCG TTTC CGGACCGCCC TTCTATTTTTGACCT TERM 3372 5081205 - 5081228 + r 100 -19.6 -4.08349 | opp_overlap 5081205, overlap 5081200 GCGACAAAAGAAAAA GGGCGGTCCG TTTC CGGACCGCCC TTCTATTTTTGACCT Caul_4698 5083753 - 5081267 - | TonB-dependent receptor Caul_4699 5083947 - 5085530 + | hypothetical protein Caul_4700 5086310 - 5085669 - | 3-oxoacid CoA-transferase, B subunit TERM 3373 5086086 - 5086068 - G 72 -14.6 -2.86271 | opp_overlap 5086067 5086065 5086049, overlap 5086065 GGCCGACGAGAAGTA CGAGCTGG AGT CCAGCTCG GTGATTGTCTGCTTG Caul_4701 5087038 - 5086310 - | 3-oxoacid CoA-transferase, A subunit TERM 3374 5086700 - 5086685 - G 71 -11.8 -3.61398 | GGTGCGCGTGAAGAA GGCGGG AATG CCCGCC CCGCCGGCGCGGATG Caul_4702 5087135 - 5087746 + | NAD(P)H dehydrogenase (quinone) Caul_4703 5087802 - 5089718 + | potassium efflux system protein TERM 3375 5089729 - 5089700 - T 80 -14.9 -3.16564 | overlap 5089718 GCGCGAGGCGAGCAA GCGCGAGGGCGCC AACT AGCGCCCCCGCCC TCGATCGGACCTAAC Caul_4704 5091194 - 5089740 - | AMP nucleosidase TERM 3376 5090520 - 5090502 - G 70 -14.6 -2.73875 | overlap 5090499 CCCGCCCGAACACGA CAGCCCCT CGT AGGGGCTG TCCGGAAGCGCCAAC Caul_4705 5091381 - 5092640 + | sodium:dicarboxylate symporter Caul_4706 5092725 - 5093144 + | hypothetical protein TERM 3377 5093182 - 5093155 - T 74 -12 -3.50393 | overlap 5093129 5093156 CTTGAGGTCAGACAA CCAGCCAGCGCC GATC AGCGCTGACTGA CCCTCACCCAGTCGA Caul_4707 5094044 - 5093169 - | glycoside hydrolase family protein TERM 3378 5093854 - 5093880 + g 78 -14.4 -3.61398 | overlap 5093855 5093857 ACCGACACATTGGCT GGAGCGGCGGTG TAG CACTGCCGCTCG TTGTTGCCGCCGCCC TERM 3379 5093855 - 5093879 + g 78 -17.9 -2.76696 | overlap 5093854 5093857 CCGACACATTGGCTG GAGCGGCGGTG TAG CACTGCCGCTC GTTGTTGCCGCCGCC TERM 3380 5093857 - 5093877 + g 72 -14.7 -2.93073 | overlap 5093855 5093854 GACACATTGGCTGGA GCGGCGGTG TAG CACTGCCGC TCGTTGTTGCCGCCG Caul_4708 5095049 - 5094180 - | 2-dehydropantoate 2-reductase TERM 3381 5095095 - 5095072 - R 100 -15.2 -4.62441 | opp_overlap 5095069 CTCCAGACAAAGAAA CGCCGCCCTC TTTC GGGGGCGGCG GCATGATATCCCCTA Caul_4709 5096162 - 5095122 - | ribonucleotide-diphosphate reductase subunit beta TERM 3382 5095264 - 5095302 + g 70 -3.7 -4.45544 | gap 2, opp_overlap 5095254, overlap 5095265 AAGAAGTTGGCGTGC TCCAC-GCCC-GACAGCAG CGA CTGCAGCCAGGGCAGCGGG TTTTCCTTGATGCCG Caul_4710 5096300 - 5096977 + | glutathione S-transferase family protein Caul_4711 5097959 - 5096988 - | hypothetical protein TERM 3383 5097432 - 5097468 + g 71 -10.8 -3.62522 | gap 1 CGATCCCGAACGCTT GACCA-GTTCGTCGGCC GTGC GGCCGTCGGCCATGGTC TTGTTCAGGGCGTTG Caul_4712 5098174 - 5099238 + | GTPase ObgE Caul_4713 5099238 - 5100371 + | gamma-glutamyl kinase Caul_4714 5100372 - 5100788 + | hypothetical protein Caul_4715 5103364 - 5101031 - | alpha-1,2-mannosidase TERM 3384 5103624 - 5103660 + r 79 -9.3 -4.20106 | overlap 5103625 GAGCGATTGGGAAGG GTGCGAAGCGCCCGGGC CTC GCCCGGATGATTTGCAG TTTTGAGTACCGTTT TERM 3385 5103625 - 5103659 + r 73 -12.8 -3.11341 | overlap 5103624 AGCGATTGGGAAGGG TGCGAAGCGCCCGGGC CTC GCCCGGATGATTTGCA GTTTTGAGTACCGTT TERM 3386 5104278 - 5104336 + r 79 -15.1 -2.94365 | gap 1, opp_overlap 5104310, overlap 5104317 CCTCGCCCTTTCCCA TCCGCCCGCAGCGG-CGAGGCCGCGCCT TGAA AGGCGCGGCCCCATCCGGGGTGGATGGA GTTTATGGGCTATCC Caul_4716 5105311 - 5104346 - | hypothetical protein Caul_4717 5105455 - 5106729 + | gamma-glutamyl phosphate reductase TERM 3387 5107249 - 5107282 + G 75 -15.9 -2.87132 | overlap 5107251 GTCCAGCGCCGCGGC GATCCTGGCCGACGC CACG GCGCCGGCCTGGGTC TATCTGACCGGGCCG Caul_4718 5106779 - 5107348 + | nicotinic acid mononucleotide adenylyltransferase Caul_4719 5107419 - 5107919 + | uncharacterized phage-associated protein-like protein Caul_4720 5108014 - 5108340 + | hypothetical protein Caul_4721 5108391 - 5108861 + | iojap-like protein Caul_4722 5108985 - 5109449 + | hypothetical protein TERM 3388 5109458 - 5109489 + F 71 -13.6 -2.53876 | AGATTAGTTTTAGAT CCGCTCTTCCCAGC GAAC GCCGGGGTGAGCGG TGGCTTGGGATGGGC Caul_4723 5109552 - 5110604 + | peptidase M23B Caul_4724 5110719 - 5112110 + | carboxyl-terminal protease TERM 3389 5112116 - 5112160 + T 95 -18.5 -3.53224 | opp_overlap 5112110 GGAGAAGTAGTCAGG CTTGGCGCCGTCACCCTCCGC CCG GAGGGGCATGACGGCGCCAGG TTTCACCGCCGCCTC TERM 3390 5112263 - 5112221 - T 77 -13.4 -3.31144 | overlap 5112223 GGCGCAGCGCGACAA CATGCTGGCCAAGGCCGAAG CGT CTACGGGCTTGGGCAGCACA TCGTCCATACCGGCT Caul_4725 5114041 - 5112197 - | integral membrane sensor hybrid histidine kinase TERM 3391 5112261 - 5112223 - G 80 -16 -3.22475 | overlap 5112221 CGCAGCGCGACAACA TGCTGGCCAAGGCCGAAG CGT CTACGGGCTTGGGCAGCA CATCGTCCATACCGG TERM 3392 5113807 - 5113783 - G 81 -9.9 -4.30576 | overlap 5113785 5113803 GCGCCAGCAGCAAAA GCCGGTCGGCC ATC AACCGACCGCC AAGGGCCGCGCCGAG Caul_4726 5114322 - 5115509 + | protein of unknown function DUF610 YibQ Caul_4727 5115506 - 5116018 + | dinucleoside polyphosphate hydrolase TERM 3393 5116380 - 5116413 + G 71 -10.1 -3.68936 | CGCCCCGGCCTCGCC GGCCGACGCGCGCGG CAAG CCCAGCCTGTCGGCC TTGTTCACCTTCCTC TERM 3394 5116563 - 5116509 - g 78 -14.3 -3.61398 | opp_overlap 5116510, overlap 5116511 5116559 GGGCGTGCTGAACAA GACGCCGCC-CGAACGGCGCGAGGCGA TCT TCGCCAC-CACCGTTCACGACAGCGGC CAGGTGCTGACCGAC TERM 3395 5116561 - 5116511 - g 79 -15.5 -3.38812 | opp_overlap 5116510, overlap 5116509 5116559 GCGTGCTGAACAAGA CGCCGCC-CGAACGGCGCGAGGCGA TCT TCGCCAC-CACCGTTCACGACAGCG GCCAGGTGCTGACCG Caul_4728 5116051 - 5117625 + | arylesterase-related protein Caul_4729 5117670 - 5118419 + | alpha/beta fold family hydrolase Caul_4730 5118521 - 5118901 + | putative transposase of insertion sequence ISRm2011-2, orfA protein Caul_4731 5118963 - 5119466 + | transposase and inactivated derivatives-like protein Caul_4732 5119975 - 5119652 - | small multidrug resistance protein TERM 3396 5120109 - 5120076 - R 100 -10.9 -4.82901 | opp_overlap 5120082, overlap 5120082 GTCCCCGGAGAAAAA GGAAAAGGCGCGGGG TCGT CCCCGCGCCTTTGAT CAGATAGGACCACCA TERM 3397 5120103 - 5120082 - R 100 -18.7 -4.82678 | opp_overlap 5120082, overlap 5120076 GGAGAAAAAGGAAAA GGCGCGGGG TCGT CCCCGCGCC TTTGATCAGATAGGA TERM 3398 5120082 - 5120103 + r 100 -18.7 -3.74693 | opp_overlap 5120082 5120076 GGAGAAAAAGGAAAA GGCGCGGGG TCGT CCCCGCGCC TTTGATCAGATAGGA Caul_4733 5120897 - 5120157 - | hypothetical protein Caul_4734 5122185 - 5121055 - | CBS domain-containing protein TERM 3399 5122318 - 5122279 - R 85 -15.6 -3.53224 | opp_overlap 5122280, overlap 5122283 GAGGTGGGCCCTAAA GCAAGACGGCCCGGACGC TTTC ACGTCCGGGCCGTCAGGT CTTCAAAGATCGCGA TERM 3400 5122280 - 5122317 + r 90 -18.4 -3.03124 | opp_overlap 5122279 5122283 AGGTGGGCCCTAAAG CAAGACGGCCCGGACG CTTTCA CGTCCGGGCCGTCAGG TCTTCAAAGATCGCG TERM 3401 5122314 - 5122283 - R 100 -23.8 -3.51232 | opp_overlap 5122280, overlap 5122279 TGGGCCCTAAAGCAA GACGGCCCGGACGC TTTC ACGTCCGGGCCGTC AGGTCTTCAAAGATC Caul_4735 5122610 - 5122350 - | F0F1 ATP synthase subunit epsilon Caul_4736 5122858 - 5122610 - | hypothetical protein Caul_4737 5124486 - 5122858 - | F0F1 ATP synthase subunit beta Caul_4738 5125428 - 5124544 - | F0F1 ATP synthase subunit gamma Caul_4739 5126065 - 5125436 - | methyltransferase type 11 Caul_4740 5127605 - 5126073 - | F0F1 ATP synthase subunit alpha TERM 3402 5127593 - 5127626 + g 76 -2.3 -4.78848 | gap 1, overlap 5127600 CCGAAATCTCGGCGG CGCGGA-TGTCCATGG CTG TCTTGGGCTCTCTGCG TTTTATCTTTGAGGC Caul_4741 5128243 - 5127653 - | ATP synthase F1, delta subunit TERM 3403 5128178 - 5128156 - G 74 -14.8 -3.04144 | TCGTCAGTTCGAACA GGGACTGCGC ATA GCGCTGTCCC GCATCCGTCGCCTTG Caul_4742 5128656 - 5128420 - | hypothetical protein TERM 3404 5128494 - 5128448 - G 74 -15.1 -3.06815 | ACCCTGCGGAACACA GCCGAGGCCGCCG-CGACCATCG CGC CGTCGGCCGTCCG-GGCCTCGGC CTGGGCGAAGACCAG TERM 3405 5128763 - 5128739 - R 100 -16.4 -5.30616 | CGAGGCAAAGAAAAA GGGCGACGGG ACCAG CCCGCCGCCC CATCAGGCGAATGTT Caul_4743 5129185 - 5128838 - | hypothetical protein TERM 3406 5129340 - 5129369 + r 86 -4.9 -5.14563 | opp_overlap 5129339 5129341, overlap 5129341 TCAGTGTTCAAAAAT AGCGCAAGCGAAA ACTA TTTCGCATGAGCA TTTTTTAATGAAACG TERM 3407 5129368 - 5129341 - R 71 -8.4 -3.90762 | opp_overlap 5129341 5129340, overlap 5129339 CAGTGTTCAAAAATA GCGCAAGCGAAA ACTA TTTCGCATGAGC ATTTTTTAATGAAAC TERM 3408 5129491 - 5129476 - R 81 -7.5 -4.46212 | CGCCTCATCAGAAAA CGGCG GTCAGG CGCCG GCGTAAAGATTGGCG Caul_4744 5130672 - 5129482 - | FAD dependent oxidoreductase Caul_4745 5130892 - 5132184 + | acyl-CoA dehydrogenase domain-containing protein Caul_4746 5132378 - 5133022 + | LemA family protein TERM 3409 5133157 - 5133183 + F 81 -13.6 -3.55219 | overlap 5133175 GTATTCGCCTCGCGC CACCTCCCCCGC TGT GCGGGTGAGGAG TTATGTGCTCGCCTT Caul_4747 5133188 - 5133943 + | hypothetical protein Caul_4748 5133943 - 5134638 + | hypothetical protein TERM 3410 5135408 - 5135368 - g 72 -13.2 -3.14564 | gap 1 GCACTTGGTGATCAA CGGCCTGGGCGCGGCCG GAGCCTGG CGGTCGCGGCC-GGCCG AGGCGGCGGCGCTTG Caul_4749 5134664 - 5135521 + | abortive infection protein Caul_4750 5135559 - 5135981 + | hypothetical protein TERM 3411 5136010 - 5135979 - T 100 -19.4 -4.56597 | overlap 5135981 GGGGCCGCGCAAAAA TAGGGGACGGCCGG CTGC CCGGCCGCCCCCTT GGCCTAAAGATAGAA TERM 3412 5136008 - 5135981 - T 100 -22 -3.90048 | overlap 5135979 GGCCGCGCAAAAATA GGGGACGGCCGG CTGC CCGGCCGCCCCC TTGGCCTAAAGATAG Caul_4751 5138415 - 5136028 - | TonB-dependent receptor TERM 3413 5136960 - 5136976 + g 75 -5.7 -4.42238 | overlap 5136955 TGGCGAACAGGCCGC CCGACGT GAA GCGGCGG TTTTCCTTGAAGTCG TERM 3414 5138672 - 5138686 + H 77 -12.8 -3.65351 | overlap 5138676 TGAGCGGGGCGGTTG GCGGCG CGC CGCCGC TTTACGTGCGCGTGA TERM 3415 5139918 - 5139944 + G 71 -11.4 -3.65201 | overlap 5139919 GTGGTGACCATGTGC ATCGGCGGCGGC ATG GGCGCCGCCGGC TTGTTCGAGATCTTC TERM 3416 5139919 - 5139943 + G 70 -14.9 -2.78639 | overlap 5139918 TGGTGACCATGTGCA TCGGCGGCGGC ATG GGCGCCGCCGG CTTGTTCGAGATCTT Caul_4752 5138775 - 5139962 + | acetyl-CoA acetyltransferase TERM 3417 5140030 - 5139988 - f 74 -11.6 -3.52472 | gap 2, opp_overlap 5139990 5139992 5139996, overlap 5139984 5139996 ATAGGTCGAAACTAA CTAGCCAAGCCCCTGAATTC CACGC GAATTCAGGGGCTTGA-T-G CATTCTCGCCATGGG TERM 3418 5139992 - 5140028 + F 86 -18.2 -2.59748 | opp_overlap 5139988 5139984 5139996, overlap 5139990 5139996 GTCGAAACTAACTAG CCAAGCCCCTGAATTC CACGC GAATTCAGGGGCTTGA TGCATTCTCGCCATG TERM 3419 5140024 - 5139996 - f 89 -17.6 -3.15252 | opp_overlap 5139996 5139992 5139990, overlap 5139988 5139984 AAACTAACTAGCCAA GCCCCTGAATTC CACGC GAATTCAGGGGC TTGATGCATTCTCGC TERM 3420 5139996 - 5140024 + F 89 -17.6 -3.23711 | opp_overlap 5139988 5139984 5139996, overlap 5139992 5139990 AAACTAACTAGCCAA GCCCCTGAATTC CACGC GAATTCAGGGGC TTGATGCATTCTCGC Caul_4753 5140170 - 5140295 + | hypothetical protein Caul_4754 5140461 - 5140601 + | hypothetical protein Caul_4755 5141057 - 5140623 - | hypothetical protein TERM 3421 5141573 - 5141598 + G 70 -8.2 -3.86346 | gap 1 AGGGCTACCGCTTCG GCGCGCTGGAG ATCGA CGCC-GCGCGC TTTGTCCCGCAGTCG TERM 3422 5142163 - 5142196 + G 73 -8 -4.22652 | opp_overlap 5142125 ATCGGCGACGGCGTG GCCGCGCCGGTGGT GCGCTG GCTGTCGGAGCGGC TTTTGACTCCTCTCG Caul_4756 5141119 - 5142246 + | DNA-cytosine methyltransferase Caul_4757 5142326 - 5143312 + | cysteine synthase A Caul_4758 5143344 - 5143817 + | DNA mismatch endonuclease Vsr Caul_4759 5145599 - 5143818 - | integral membrane sensor hybrid histidine kinase Caul_4760 5146062 - 5145772 - | hypothetical protein Caul_4761 5146391 - 5146071 - | protein of unknown function YGGT Caul_4762 5146998 - 5147516 + | hemolysin-type calcium-binding region TERM 3423 5147556 - 5147587 + T 100 -21.6 -4.15044 | opp_overlap 5147558, overlap 5147558 GACCGAGGACAAAAA AAGGGGGCGCGACC AGCC GGTCGCGCCCCCTG TTTCTTGCCCGGGCG TERM 3424 5147585 - 5147558 - T 100 -24.2 -5.67063 | opp_overlap 5147556 5147558 CCGAGGACAAAAAAA GGGGGCGCGACC AGCC GGTCGCGCCCCC TGTTTCTTGCCCGGG TERM 3425 5147558 - 5147585 + T 100 -24.2 -3.6761 | opp_overlap 5147558, overlap 5147556 CCGAGGACAAAAAAA GGGGGCGCGACC AGCC GGTCGCGCCCCC TGTTTCTTGCCCGGG Caul_4763 5148843 - 5147620 - | argininosuccinate synthase TERM 3426 5148908 - 5148871 - R 84 -8.5 -4.40003 | gap 1, opp_overlap 5148861 5148898, overlap 5148878 5148898 5148900 TTCGAGAAACACAAA GTGA-CAAGTGTTTCTCC TTC GGAGAAACACCGGGTCGC CGGGCGTTTAGCGCG TERM 3427 5148900 - 5148878 - R 83 -15 -3.51721 | opp_overlap 5148861 5148898, overlap 5148871 5148898 AACACAAAGTGACAA GTGTTTCTCC TTC GGAGAAACAC CGGGTCGCCGGGCGT Caul_4764 5149313 - 5148954 - | hypothetical protein Caul_4765 5151273 - 5149315 - | K potassium transporter TERM 3428 5150949 - 5150971 + g 74 -11.2 -3.78934 | GGGCCAGGGCCATCA GGGCCAGGGT GCC GCCCTCGCCC TTGTTGTCGGCGCGC TERM 3429 5151203 - 5151181 - G 73 -9.9 -3.89614 | gap 1 CGCAAGCGCCAGAAA GCCATG-CCC TTTC GGGTCATGGC CGGCTTGCGGAGGGA TERM 3430 5151495 - 5151510 + G 75 -10.4 -4.08767 | CGCCCTAGCCTATCT GGCGCA CAAG TGCGCC TTTTCGGCCGATCGC Caul_4766 5151445 - 5151882 + | BadM/Rrf2 family transcriptional regulator Caul_4767 5151910 - 5152503 + | hypothetical protein Caul_4768 5153772 - 5152528 - | major facilitator transporter TERM 3431 5154140 - 5154124 - g 72 -9.3 -4.07568 | CGTCCTGGCCGAAAA GGTCGCC GAA GGCGTCC GCGACGCCGGCCAGA Caul_4769 5154062 - 5154667 + | flavodoxin/nitric oxide synthase TERM 3432 5154729 - 5154766 + F 95 -13.3 -4.28361 | opp_overlap 5154707, overlap 5154730 GCGGCGCTCCGGCGC CGCCGAGGGGGCGCTTG AGCC CGAGCGCCCCCTCCCCC TTTTCATCGCCTTGA TERM 3433 5154730 - 5154765 + F 86 -16.8 -3.16534 | opp_overlap 5154707, overlap 5154729 CGGCGCTCCGGCGCC GCCGAGGGGGCGCTTG AGCC CGAGCGCCCCCTCCCC CTTTTCATCGCCTTG Caul_4770 5154846 - 5155646 + | short-chain dehydrogenase/reductase SDR Caul_4771 5156142 - 5155651 - | RES domain-containing protein Caul_4772 5156633 - 5156154 - | hypothetical protein Caul_4773 5157427 - 5156732 - | multiple antibiotic resistance (MarC)-related protein TERM 3434 5157342 - 5157298 - G 100 -23.6 -2.99649 | gap 1, overlap 5157286 5157284 ACAGGCCGATATAGA CCGCCACCATGCG-GCGGCCG GCGG CGGCCGCGCCCAGGGTGGCGG CGGCGAACAGCGGCA Caul_4774 5157512 - 5158201 + | orotidine 5'-phosphate decarboxylase TERM 3435 5158239 - 5158266 + T 86 -15.6 -3.65827 | AGCCGATCCTCCACG TCGATCGCCGCG ACGC CCCGGCGATCGA TTTCCATCCGCGTTA Caul_4775 5158456 - 5158289 - | filamentation induced by cAMP protein Fic Caul_4776 5159419 - 5158478 - | filamentation induced by cAMP protein Fic TERM 3436 5158765 - 5158790 + g 74 -14.7 -3.02144 | gap 1 GGATCTTTTCGCTGA CGGC-GCGGCCG ATA CGGCCGTTGCCG TCTTCGAACGGGTGA Caul_4777 5159711 - 5159496 - | hypothetical protein TERM 3437 5159758 - 5159747 - H 72 -2.2 -4.77719 | opp_overlap 5159750, overlap 5159750 TAAAATTTAACAAAA CAAC GGTT GTCG AACGCCGCTACCGCT Caul_4778 5159835 - 5160248 + | putative signal peptide protein TERM 3438 5160360 - 5160400 + G 70 -3.8 -4.39571 | gap 2, overlap 5160359 5160361 ATCGACGCGGCCCTG TCG-CGG-CGCGGCGGGCTC GAC GAGGCCGCCTCGGCCAACGC TTTTCGCTTTCTCGA Caul_4779 5160291 - 5161571 + | Fmu (Sun) domain-containing protein TERM 3439 5161696 - 5161661 - f 77 -12.7 -3.57561 | opp_overlap 5161666 5161666, overlap 5161662 5161675 5161676 CTGCAACCCCGCAAA CCCCGGCGCGACAA-CG GGCT CGCTTGTCGCGC-GAGG CCAAGCCCGCTAAGC Caul_4780 5161713 - 5162378 + | ribulose-phosphate 3-epimerase TERM 3440 5162482 - 5162495 + G 75 -4.5 -4.58283 | gap 1, overlap 5162463 5162481 5162483 ATGGTCGCGGCAAGG C-GCCC AAG GGGCTG TTTTTCAAGGCCTTG TERM 3441 5162483 - 5162493 + G 70 -8.2 -3.90316 | overlap 5162463 5162482 5162481 TGGTCGCGGCAAGGC GCCC AAG GGGC TGTTTTTCAAGGCCT TERM 3442 5163916 - 5163881 - g 84 -5.2 -4.96848 | opp_overlap 5163899, overlap 5163882 5163883 GCTCCCAGACAAAAA TGGCGTCTCGCCCCAT GCCG ACGGGCCGCGCCGCTA CCTGCCGTTCATGAT Caul_4781 5162388 - 5164178 + | heparinase II/III family protein Caul_4782 5164375 - 5165964 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Caul_4783 5166083 - 5166844 + | hypothetical protein Caul_4784 5166931 - 5167404 + | hypothetical protein Caul_4785 5167401 - 5167739 + | hypothetical protein TERM 3443 5167778 - 5167732 - T 71 -13.6 -2.64155 | gap 1, overlap 5167729 5167728 CCTTCCTGAAACCTA GGCCGTGACCGCAGCCGTCGC CGGCGC GCGAC-GCAGCGGCATCGGCC CGCGATAGGCCAGCC Caul_4786 5168949 - 5167729 - | hypothetical protein Caul_4787 5174059 - 5169212 - | NAD-glutamate dehydrogenase TERM 3444 5169692 - 5169716 + g 74 -12.8 -3.65812 | opp_overlap 5169692 GCCGTCGGCGATATA GGCCTTGGCC CGCTT GGCCACGGCC TTCTGTTCGAACGGC Caul_4788 5175450 - 5174329 - | hypothetical protein TERM 3445 5176196 - 5176163 - g 71 -10.9 -3.55444 | TGTTGACCCTGCAAA GCCAGGGCGCCGAAA ACTT CTTCGGCGAGCCGGC CCTGAAGCTGACCGA TERM 3446 5176807 - 5176793 - g 70 -12.8 -3.31144 | opp_overlap 5176793 CCCTGATCGCCAGAA GCCCGG TCG CCGGGC TCTATGACCAGACGC TERM 3447 5177002 - 5176956 - g 85 -18.7 -3.09492 | gap 2 CCGTGAACGTGAAGA GGCGGC-GGAGGCCCGC-GCCGC GCC GCGACCGCGCGCCTCCAGCCGTC AGTCCATGGGCGAGG Caul_4789 5175565 - 5177109 + | protein of unknown function DUF853 NPT hydrolase putative Caul_4790 5179542 - 5177119 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3448 5178234 - 5178205 - G 72 -13.5 -3.23216 | CTGCACGACGATGAA TTCGTCGCCGCCC AGAC GGGCGGCGAAGGA CGGGGCGGTCACCGA TERM 3449 5179011 - 5178977 - G 78 -12 -3.73775 | opp_overlap 5178999, overlap 5178978 CCCATGCCGATGAAA TGCAGGCTGCAGACGC CGA GCGTCAGCAGCACGCC GCCGCCGATCTGCTT TERM 3450 5179010 - 5178978 - G 72 -15.5 -2.84051 | opp_overlap 5178999, overlap 5178977 CCATGCCGATGAAAT GCAGGCTGCAGACGC CGA GCGTCAGCAGCACGC CGCCGCCGATCTGCT TERM 3451 5179608 - 5179595 - R 76 -6.7 -4.46233 | TCAATCCCAAAGAAA CGTTG AATG CAACG AGGTCTGAGGATTTC Caul_4791 5180048 - 5179656 - | hypothetical protein Caul_4792 5180557 - 5182383 + | glycoside hydrolase family protein Caul_4793 5183354 - 5182392 - | glycoside hydrolase family protein Caul_4794 5183807 - 5184739 + | NAD-dependent epimerase/dehydratase Caul_4795 5184781 - 5186040 + | hypothetical protein TERM 3452 5186753 - 5186739 - g 70 -9.2 -3.85698 | opp_overlap 5186741 CTGCGGGCCGAGAAA GCCGCG GGC CGCAGC CTGCATCTGGTCACG Caul_4796 5186037 - 5187932 + | hypothetical protein Caul_4797 5187929 - 5189272 + | FAD linked oxidase domain-containing protein Caul_4798 5189265 - 5190032 + | short-chain dehydrogenase/reductase SDR TERM 3453 5190066 - 5190037 - T 100 -9.1 -5.055 | opp_overlap 5190039 5190040, overlap 5190038 5190040 TGAAGCTCTAAAAAA GCAGGGGCCGGTC TCGC GACCGGCCCCATT TGTATCCAGCCTGAG TERM 3454 5190065 - 5190038 - T 77 -12.6 -3.62577 | opp_overlap 5190039 5190040, overlap 5190037 5190040 GAAGCTCTAAAAAAG CAGGGGCCGGTC TCGC GACCGGCCCCAT TTGTATCCAGCCTGA TERM 3455 5190039 - 5190064 + T 100 -16.1 -4.0371 | opp_overlap 5190038 5190037 5190040, overlap 5190040 AAGCTCTAAAAAAGC AGGGGCCGGTC TCGC GACCGGCCCCA TTTGTATCCAGCCTG TERM 3456 5190040 - 5190063 + T 93 -19.6 -3.01905 | opp_overlap 5190038 5190037 5190040, overlap 5190039 AGCTCTAAAAAAGCA GGGGCCGGTC TCGC GACCGGCCCC ATTTGTATCCAGCCT TERM 3457 5190063 - 5190040 - T 95 -19.6 -3.38056 | opp_overlap 5190040 5190039, overlap 5190038 5190037 AGCTCTAAAAAAGCA GGGGCCGGTC TCGC GACCGGCCCC ATTTGTATCCAGCCT Caul_4799 5190295 - 5190083 - | hypothetical protein Caul_4800 5191395 - 5190292 - | hypothetical protein Caul_4801 5191709 - 5193031 + | O-antigen polymerase TERM 3458 5193098 - 5193131 + F 79 -16.7 -2.53213 | gap 1, opp_overlap 5193091, overlap 5193086 AGGTAATACGTTCGA CGACTGACGCGCCCCG GCG CCGGGCGCGTCGG-CG TCGCTTGCCCAATTC TERM 3459 5193209 - 5193226 + F 82 -11.3 -3.97209 | opp_overlap 5193209 5193206 CGGCGTATTGAAGCA GTCGTCC GCCC GGACGAC TTTCCTCTTGGTTGG TERM 3460 5193320 - 5193378 + F 91 -18.6 -2.86291 | opp_overlap 5193343, overlap 5193322 5193347 CGCCCTCCCGCCTCC ACGCCGCGGAGCCGGCTCGAACACCCGC GCC GCGCGCATCCGAGCCGGCTCCGCGCAGG CCTTTTTCTTTGGTG TERM 3461 5193322 - 5193379 + F 84 -13.4 -3.78958 | gap 3, opp_overlap 5193343, overlap 5193320 5193347 CCCTCCCGCCTCCAC GCC-GCG--GAGCCGGCTCGAACACCCGC GCC GCGCGCATCCGAGCCGGCTCCGCGCAGGC CTTTTTCTTTGGTGG TERM 3462 5193347 - 5193380 + F 100 -8.7 -5.33405 | gap 1, opp_overlap 5193343, overlap 5193320 5193322 CGGCTCGAACACCCG CGCC-GCGCGCATCCG AGC CGGCTCCGCGCAGGCC TTTTTCTTTGGTGGC TERM 3463 5193817 - 5193801 - g 70 -9.3 -3.8211 | overlap 5193798 CGGCACCGATAAGAA CGACGCG ATC CGCGGCG GCGGCGGCGGCGACA Caul_4802 5193685 - 5196408 + | glycoside hydrolase family protein TERM 3464 5196504 - 5196465 - T 81 -7 -4.67755 | opp_overlap 5196469 5196470, overlap 5196470 ATAGTCAGGCAAAAA TTGAACCCGCCTGGAAGC TTGC GCTTTCAGGCGGGCTTTT TACAGGTCACAGAGA TERM 3465 5196469 - 5196500 + T 100 -16.6 -4.59773 | opp_overlap 5196465 5196470, overlap 5196470 TCAGGCAAAAATTGA ACCCGCCTGGAAGC TTGC GCTTTCAGGCGGGC TTTTTACAGGTCACA TERM 3466 5196470 - 5196499 + T 95 -20.1 -3.35542 | opp_overlap 5196465 5196470, overlap 5196469 CAGGCAAAAATTGAA CCCGCCTGGAAGC TTGC GCTTTCAGGCGGG CTTTTTACAGGTCAC TERM 3467 5196499 - 5196470 - T 95 -17.9 -3.46102 | opp_overlap 5196470 5196469, overlap 5196465 CAGGCAAAAATTGAA CCCGCCTGGAAGC TTGC GCTTTCAGGCGGG CTTTTTACAGGTCAC Caul_4803 5196843 - 5196511 - | hypothetical protein TERM 3468 5197095 - 5197079 - H 72 -4.4 -4.61147 | TAATATTATACAAAA TGGCTA TCTTC CAGCCA GATCACCGGTCAAAT TERM 3469 5198167 - 5198209 + G 77 -11.2 -3.85698 | gap 1, opp_overlap 5198157 5198196, overlap 5198168 GACAAGCTCTGCTGG ACCGGCTCGCGGCCCTGGC CCGCGA GCAAGGGGC-CGAGCCGGC TTTCTAGAGCGGCCC TERM 3470 5198168 - 5198208 + G 72 -14.7 -2.91276 | gap 1, opp_overlap 5198157 5198196, overlap 5198167 ACAAGCTCTGCTGGA CCGGCTCGCGGCCCTGGC CCGCGA GCAAGGGGC-CGAGCCGG CTTTCTAGAGCGGCC Caul_4804 5197215 - 5198216 + | ExoV-like protein TERM 3471 5198221 - 5198249 + T 100 -18.9 -3.8297 | opp_overlap 5198196 CGGCTTTCTAGAGCG GCCCCGACCTGAT TGC ATCAGGACGGGGC TTTAGGCTTTTTGTT Caul_4805 5199345 - 5198326 - | glycosyl transferase family protein TERM 3472 5198728 - 5198778 + g 82 -14.7 -3.45945 | opp_overlap 5198709, overlap 5198730 CGCCGCGGCCGGCTC GA-GCCAGATCCGGGCGCCCGCCTG GAC CAGTCGGGCGTCCAGTTC-GGCGTC TTCGTTGTGGCTGAA TERM 3473 5198730 - 5198775 + g 77 -17.5 -2.57541 | gap 1, opp_overlap 5198709, overlap 5198728 CCGCGGCCGGCTCGA GCCAGATCCGGGCGCCCGCCTG GAC CAGTCGGGCGTCCAGTTC-GGC GTCTTCGTTGTGGCT TERM 3474 5199320 - 5199330 + g 79 -5.4 -4.68994 | ACGATCAGCACGTCG TCGA AGG TCGA TTTTTGAGTGGTCAT Caul_4806 5200469 - 5199348 - | hypothetical protein TERM 3475 5200187 - 5200136 - G 81 -12.8 -3.92869 | gap 1, overlap 5200139 CCAGGCACTCATAAA CCACCGCCG-CGCGCGGCGCGATCA GCG CGCGCGCGCCGCGCGCCAGGAGCAG GACTTCCAGGTTTCG TERM 3476 5200176 - 5200139 - G 78 -16.2 -3.02745 | gap 1, overlap 5200136 GGCACTCATAAACCA CCGCCGCGCGCG-GCGC GATCA GCGCGCGCGCGCCGCGC GCCAGGAGCAGGACT Caul_4807 5200739 - 5202169 + | polysaccharide biosynthesis protein Caul_4808 5202251 - 5203714 + | membrane bound O-acyl transferase MBOAT family protein Caul_4809 5203721 - 5204830 + | hypothetical protein TERM 3477 5204888 - 5204864 - T 100 -20.1 -5.40072 | opp_overlap 5204864 CTCCGGTCAAAAAAA GGGCTCCGTTC TCG GAACGGAGCCC TTGTCGACACCCCCG TERM 3478 5204864 - 5204888 + T 95 -20.1 -3.28712 | opp_overlap 5204864 CTCCGGTCAAAAAAA GGGCTCCGTTC TCG GAACGGAGCCC TTGTCGACACCCCCG Caul_4810 5205737 - 5204913 - | periplasmic protein-like protein Caul_4811 5206792 - 5205902 - | glycosyl transferase family protein TERM 3479 5207704 - 5207734 + G 77 -15.4 -3.14344 | opp_overlap 5207716, overlap 5207703 5207701 GGAGGCCCATCTGAG CGCGCTGAAGGACG GCG CGGCCTTCATCGCG TTGATCGAGGCCCTG Caul_4812 5206901 - 5207908 + | glycosyl transferase family protein TERM 3480 5207964 - 5207925 - T 85 -15.8 -3.53091 | gap 1, overlap 5207928 ACGCCGCGCCGCAAA CGAT-TTCGGGCGAAGCGG AAA CCGCTTCGCCCGAAGAAAG TTCGCAAAACGAGAA TERM 3481 5207960 - 5207928 - T 100 -22.1 -2.90496 | overlap 5207925 CCGCGCCGCAAACGA TTTCGGGCGAAGCGG AAA CCGCTTCGCCCGAAG AAAGTTCGCAAAACG TERM 3482 5208031 - 5207974 - T 72 -7.8 -4.13343 | gap 1, opp_overlap 5207982, overlap 5207980 5207984 5208025 AGAAAGTTCGCAAAA CGAGAAGCTATGGAACGCGACCGTTTC TCCTC GAAACGATCGCGCTCCAAATCTAGT-G CTCGCGGAACGACCG TERM 3483 5208026 - 5207980 - T 93 -16.7 -3.68359 | opp_overlap 5207982, overlap 5207974 5207984 5208025 TTCGCAAAACGAGAA GCTATGGAACGCGACCGTTTC TCCTC GAAACGATCGCGCTCCAAATC TAGTGCTCGCGGAAC TERM 3484 5207982 - 5208024 + T 72 -13.5 -2.82516 | opp_overlap 5207980 5207974 5207984 CGCAAAACGAGAAGC TATGGAACGCGACCGTTTC TCCTC GAAACGATCGCGCTCCAAA TCTAGTGCTCGCGGA TERM 3485 5208022 - 5207984 - T 91 -20.5 -2.65876 | opp_overlap 5207982, overlap 5207980 5207974 CAAAACGAGAAGCTA TGGAACGCGACCGTTTC TCCTC GAAACGATCGCGCTCCA AATCTAGTGCTCGCG Caul_4813 5209396 - 5208026 - | HlyD family type I secretion membrane fusion protein TERM 3486 5209348 - 5209377 + g 78 -10.5 -4.20783 | overlap 5209361 5209365 TGACCTCGTCCTGGT CCCAACGGGCCGG CAGG CCGGCCCGGACGG TTTGTTCGGTCAGGT Caul_4814 5211168 - 5209393 - | type I secretion system ATPase Caul_4815 5213413 - 5211848 - | hypothetical protein TERM 3487 5212800 - 5212769 - G 79 -11.7 -4.09685 | gap 2, opp_overlap 5212780, overlap 5212770 GGCCAGGGCCGAAAA GCCGCCGAACACCGC GCCG GCGGTGTT-GGCG-C TGAGGAAGGACGCGG Caul_4816 5215667 - 5213415 - | non-specific protein-tyrosine kinase TERM 3488 5215307 - 5215284 - G 72 -6.6 -4.2828 | CTCGACCGACGAAAA CTCGGGATCG TGGA CGAGGCCGAG CCGTCCCACGACTTC Caul_4817 5216973 - 5215699 - | hypothetical protein TERM 3489 5215866 - 5215833 - G 77 -14.7 -3.15999 | gap 1, opp_overlap 5215840, overlap 5215840 TCGCGAGATAGTTAA CGCCAAAGATGGCCGC GGA GCGGTCATCTTT-GCG ATCGATCCGCTGATA TERM 3490 5215840 - 5215860 + g 78 -13.3 -3.61178 | opp_overlap 5215833 5215840 ATAGTTAACGCCAAA GATGGCCGC GGA GCGGTCATC TTTGCGATCGATCCG TERM 3491 5215860 - 5215840 - G 71 -11.1 -3.67417 | opp_overlap 5215840, overlap 5215833 ATAGTTAACGCCAAA GATGGCCGC GGA GCGGTCATC TTTGCGATCGATCCG TERM 3492 5216672 - 5216695 + g 70 -12.4 -3.2614 | overlap 5216673 TTGGCGGTGACGTCG TGCCGCGACC AGTT GGTCGTGGCG TTGATCTCGCCAATC TERM 3493 5217059 - 5217040 - R 71 -5 -4.42386 | overlap 5217043 CCGGGAGCCACAAAA CACCGTAA TTAA TTACGACG CGTTAATTGTAATCA Caul_4818 5217493 - 5217062 - | hypothetical protein Caul_4819 5218169 - 5217567 - | polysaccharide export protein TERM 3494 5218214 - 5218193 - R 85 -15.1 -3.45118 | opp_overlap 5218189 TCACGCTAGAACGAA CCGCGGCGC AGCA GCACCGCGG GGATCGTCTTTAGGA Caul_4820 5218911 - 5218183 - | undecaprenyl-phosphate galactose phosphotransferase Caul_4821 5219147 - 5219416 + | hypothetical protein Caul_4822 5220186 - 5219413 - | bis(5'nucleosyl)-tetraphosphatase, ApaH Caul_4823 5220322 - 5221662 + | TolC family type I secretion outer membrane protein TERM 3495 5222705 - 5222677 - g 71 -10.9 -3.63515 | GGCCATGGCCAACAA GGTCGCCCAGGTC CTG GGCCTGGAGGACC TGACCGGCAAGACCG Caul_4824 5221772 - 5223079 + | nucleotide sugar dehydrogenase Caul_4825 5223082 - 5224056 + | NAD-dependent epimerase/dehydratase Caul_4826 5224976 - 5224053 - | hypothetical protein Caul_4827 5225860 - 5224973 - | short-chain dehydrogenase/reductase SDR TERM 3496 5225551 - 5225597 + g 78 -14.3 -3.61715 | gap 1, overlap 5225544 5225561 TGGCGTCCCAGCCCT CGGCGGTCATGTCGGCCACGCC GTTG GGCGCG-CCGCCGTGGCCGGCG TTGTTGAACAGGATG TERM 3497 5225561 - 5225596 + g 70 -14.6 -2.76815 | overlap 5225551 GCCCTCGGCGGTCAT GTCGGCCACGCCGTTG GGCG CGCCGCCGTGGCCGGC GTTGTTGAACAGGAT Caul_4828 5226169 - 5225972 - | hypothetical protein Caul_4829 5227065 - 5226166 - | WecB/TagA/CpsF family glycosyl transferase Caul_4830 5228263 - 5227265 - | alcohol dehydrogenase Caul_4831 5228333 - 5229211 + | peptidase T2 asparaginase 2 TERM 3498 5229303 - 5229270 - T 74 -11.7 -3.53012 | overlap 5229279 TCGTCTTCCCCCAAA GGGGGAAGAGCCT GAAGGCGA AGGCTCCGCCCCC TCGCCGCGACAGACC Caul_4832 5230474 - 5230052 - | zinc finger SWIM domain-containing protein Caul_4833 5230968 - 5230471 - | hypothetical protein Caul_4834 5231050 - 5233362 + | PAS/PAC sensor signal transduction histidine kinase TERM 3499 5233432 - 5233462 + T 100 -19.1 -4.06384 | gap 1, opp_overlap 5233432 CGCACACACGCAAAA CGCCGCGA-CAGCC GAAG GGCTGGTCGCGGCG TTTCTGGTCTTCAAC TERM 3500 5233462 - 5233432 - T 100 -19.1 -4.26188 | gap 1, opp_overlap 5233432 CGCACACACGCAAAA CGCCGCGA-CAGCC GAAG GGCTGGTCGCGGCG TTTCTGGTCTTCAAC Caul_4835 5233858 - 5233538 - | ferredoxin Caul_4836 5235152 - 5233890 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 3501 5235179 - 5235196 + r 76 -5.5 -4.56775 | opp_overlap 5235179, overlap 5235181 TCCCGTTCGAGCAAA GATGACG GCAG CGTCACC TTTTTGCAAGCCGAT Caul_4837 5236093 - 5235311 - | succinate dehydrogenase iron-sulfur subunit Caul_4838 5237892 - 5236105 - | succinate dehydrogenase flavoprotein subunit Caul_4839 5238299 - 5237892 - | succinate dehydrogenase, hydrophobic membrane anchor protein Caul_4840 5238709 - 5238302 - | succinate dehydrogenase, cytochrome b556 subunit Caul_4841 5238903 - 5239709 + | hypothetical protein TERM 3502 5239833 - 5239797 - T 74 -11.6 -3.53012 | overlap 5239825 TGGCCGGGCGCGAAA TGGTCCTCATCCTGAG CCTGT CGAAGGACGAGGACCA CGCAGGGTGCGTCGA Caul_4842 5240446 - 5239859 - | NUDIX hydrolase Caul_4843 5241588 - 5240470 - | AFG1 family ATPase Caul_4844 5242550 - 5241600 - | LysR family transcriptional regulator Caul_4845 5242674 - 5243432 + | short-chain dehydrogenase/reductase SDR TERM 3503 5243450 - 5243490 + F 91 -18.4 -3.11988 | opp_overlap 5243472, overlap 5243451 5243451 TCCAGGCTCTGACTA G-CGCTCGCCTCCGGCCATG AAA CGTGGCCGGGGGCGA-CGTC GTTTGTTCCCTGACA TERM 3504 5243451 - 5243488 + F 100 -22.1 -3.11702 | gap 1, opp_overlap 5243472, overlap 5243450 5243451 CCAGGCTCTGACTAG CGCTCGCCTCCGGCCATG AAA CGTGGCCGGGGGCGA-CG TCGTTTGTTCCCTGA TERM 3505 5243451 - 5243491 + F 100 -18.4 -4.20516 | gap 2, opp_overlap 5243472, overlap 5243451 5243450 CCAGGCTCTGACTAG CG-C-TCGCCTCCGGCCATG AAA CGTGGCCGGGGGCGACGTCG TTTGTTCCCTGACAC Caul_4846 5243523 - 5243717 + | hypothetical protein Caul_4847 5244248 - 5243721 - | hypothetical protein Caul_4848 5244880 - 5244245 - | hypothetical protein Caul_4849 5245024 - 5245476 + | hypothetical protein Caul_4850 5245466 - 5246557 + | aminoglycoside phosphotransferase Caul_4851 5246554 - 5247273 + | nucleotidyl transferase TERM 3506 5248859 - 5248889 + G 82 -14.7 -3.42996 | gap 1 CGCCGACCTGTGGGC CGGGTCGGCC-GGC GAAT GCCTGGCCGGCCTG TTGTCGTCGCTAATC Caul_4852 5247270 - 5250269 + | double-strand break repair protein AddB TERM 3507 5250311 - 5250291 - f 100 -18.3 -3.90112 | CCCTGCCCAAGCAAA GCCTCCCCC CGT GGGGGAGGC GGCCCGAAGGGCCGG Caul_4853 5250406 - 5253879 + | double-strand break repair helicase AddA Caul_4854 5253997 - 5254332 + | thioredoxin TERM 3508 5254395 - 5254351 - T 100 -22.2 -2.52464 | gap 1, opp_overlap 5254353 5254358 TTTTGCGCCAATCGA GACGC-AGCCGCCCGCCTCGC CGAC GCGAGGCGGGCGGTTTGCGTT TGGGCTACTTCTTGG TERM 3509 5254353 - 5254393 + T 100 -27 -3.6501 | gap 1, opp_overlap 5254351, overlap 5254358 TTGCGCCAATCGAGA CGC-AGCCGCCCGCCTCGC CGAC GCGAGGCGGGCGGTTTGCG TTTGGGCTACTTCTT TERM 3510 5254358 - 5254387 + T 100 -26.5 -3.85165 | opp_overlap 5254351, overlap 5254353 CCAATCGAGACGCAG CCGCCCGCCTCGC CGAC GCGAGGCGGGCGG TTTGCGTTTGGGCTA Caul_4855 5254510 - 5254400 - | hypothetical protein TERM 3511 5254440 - 5254450 + g 78 -8.2 -4.31835 | AACGGCGAGACCGAG GCCG GCG CGGC TTTCTTGTCCGCCTT Caul_4856 5255244 - 5254585 - | TetR family transcriptional regulator Caul_4857 5255337 - 5256002 + | O-methyltransferase family protein TERM 3512 5256087 - 5256047 - T 73 -11.2 -3.54935 | CAAAGCGCCGCGAAA CGAATTCCTCGTCCTTCG ACAAG CTCAGGATGAGGAATTCG AATGCGGAACGTCAT TERM 3513 5256177 - 5256195 + T 100 -13.1 -4.56133 | CCTCATTGCCCCTCA GGCCGCC TTCTT GGCGGCC TTTTCCTTCTTGGGC Caul_4858 5256761 - 5256174 - | MarR family transcriptional regulator Caul_4859 5257525 - 5256860 - | intracellular septation protein A Caul_4860 5258473 - 5257529 - | signal recognition particle-docking protein FtsY TERM 3514 5258433 - 5258446 + g 89 -2.3 -5.31275 | overlap 5258434 AGGCCGGAGGTCAGG CGCTG GAAC CAGCC TTTTTTCTGCTCGGG TERM 3515 5258568 - 5258544 - H 70 -12.9 -2.94912 | opp_overlap 5258550, overlap 5258548 5258550 GCTCCAATTTAGAGA GATAGAGCCTG AGA CAGGCTCTGTC GGGCGTGGCATGAAA Caul_4861 5258589 - 5259221 + | hypothetical protein Caul_4862 5259592 - 5259218 - | helix-turn-helix domain-containing protein Caul_4863 5259885 - 5259592 - | hypothetical protein Caul_4864 5260397 - 5259954 - | glutathione-dependent formaldehyde-activating GFA Caul_4865 5261482 - 5260406 - | endonuclease/exonuclease/phosphatase Caul_4866 5262828 - 5261479 - | MiaB-like tRNA modifying enzyme Caul_4867 5263670 - 5262825 - | short-chain dehydrogenase/reductase SDR TERM 3516 5262909 - 5262930 + g 81 -10.1 -4.25104 | GTTCTCGATGATGTC GCCCATGGC CCAG GCCATGCGC TTTTCGTCGAGCGCG TERM 3517 5263370 - 5263383 + g 71 -9.5 -3.71848 | opp_overlap 5263356 AGGCGTCGCCGCCCC CGCCG ACCC CGGCG TTGTTCATCAGCACG Caul_4868 5264536 - 5263667 - | diaminopimelate epimerase Caul_4869 5264610 - 5265425 + | Ion transport 2 domain-containing protein TERM 3518 5265491 - 5265472 - f 73 -11.4 -3.60098 | opp_overlap 5265463 ACCGTCCAGGTCAAA GGCCCGTC TTCG AACGGGCC ACCTGTCACGACAGC TERM 3519 5266327 - 5266381 + G 93 -17.1 -3.61398 | overlap 5266328 GGCCTCGGCCTACGC CCTGACCGACGCCGACGGCC-GGGTCG TGG CGACCCTGGCCTCCCGCG-CGGTCAGC TTCTTCGAGAGCGAG TERM 3520 5266328 - 5266380 + G 83 -20.6 -2.76696 | overlap 5266327 GCCTCGGCCTACGCC CTGACCGACGCCGACGGCC-GGGTCG TGG CGACCCTGGCCTCCCGCG-CGGTCAG CTTCTTCGAGAGCGA Caul_4870 5265521 - 5267689 + | prolyl oligopeptidase TERM 3521 5267700 - 5267745 + F 100 -21.3 -5.46706 | opp_overlap 5267710 ATTGACGGCCACGCG CCTGGAGCAAGCCGCGTGA CATAGGGC TCGCACGGCTTGCTCCAGG TTTTTGTTTTCGCAT TERM 3522 5267796 - 5267816 + F 86 -8.3 -4.57569 | overlap 5267765 AACCGCTTTTCCGCT CGCTGTTTT AGG GAAACGGCG TTTTTCAGGGCGTAA Caul_4871 5267911 - 5268993 + | hypothetical protein Caul_4872 5269155 - 5269021 - | hypothetical protein Caul_4873 5269631 - 5269284 - | hypothetical protein Caul_4874 5270204 - 5269635 - | PadR-like family transcriptional regulator Caul_4875 5270389 - 5271240 + | glutamate racemase Caul_4876 5271303 - 5271728 + | hypothetical protein TERM 3523 5271841 - 5271856 + F 100 -11.8 -5.02074 | CACGACGTAGATTCA CCCCGC TCCG GCGGGG TTTTTTGCGCCCTAA Caul_4877 5271887 - 5272411 + | activator of HSP90 ATPase 1 family protein TERM 3524 5272451 - 5272430 - T 100 -13 -5.27335 | opp_overlap 5272430 CGGCCCAAACAAAAA TCCCGGGC GCGAAG GCCCGGGA TTGATGCAAAGCCTA TERM 3525 5272430 - 5272451 + T 73 -13 -3.14344 | opp_overlap 5272430 CGGCCCAAACAAAAA TCCCGGGC GCGAAG GCCCGGGA TTGATGCAAAGCCTA Caul_4878 5273869 - 5272481 - | hypothetical protein TERM 3526 5272712 - 5272727 + g 76 -7.5 -4.25104 | GGCGGCGCGTTCCTC GGCGC GCTTGA GCGCC TTTTCGTGGGCCCCG TERM 3527 5273409 - 5273370 - G 72 -9.3 -3.96216 | GCGTCACGCAAAGAA GCCTCCAAGCCG-CCGACC TTGA GGTCGGACTGC-TGCAGGC CGTTGCGCAGGCGGT TERM 3528 5274082 - 5274047 - R 85 -14.6 -3.62591 | overlap 5274039 GCCAGAACGGCGAAA GCCGCCGCGCCGGCCC CGAA AGGCGGACACGACGGC TTCAAAACCCCGTCG Caul_4879 5275711 - 5274122 - | alkyl hydroperoxide reductase, F subunit TERM 3529 5275821 - 5275769 - R 100 -19.1 -3.55622 | gap 1, overlap 5275772 GGGAATTTCTTGAAA GAGGGGCGTCGCCGCCCCGTCCGC GGGCTG GCGGA-GGGGCGGCGACGCGGGCC GAACCCTAGATCTTG TERM 3530 5275818 - 5275772 - R 100 -21.6 -2.60992 | gap 1, overlap 5275769 AATTTCTTGAAAGAG GGGCGTCGCCGCCCCGTCCGC GGGCTG GCGGA-GGGGCGGCGACGCGG GCCGAACCCTAGATC Caul_4880 5276390 - 5275827 - | peroxiredoxin Caul_4881 5276572 - 5277525 + | LysR family transcriptional regulator Caul_4882 5277546 - 5278538 + | GumN family protein Caul_4883 5278672 - 5279178 + | hypothetical protein Caul_4884 5279205 - 5281388 + | serralysin Caul_4885 5281410 - 5281862 + | glyoxalase/bleomycin resistance protein/dioxygenase Caul_4886 5282349 - 5281927 - | cyanovirin containing protein Caul_4887 5282660 - 5284195 + | signal recognition particle protein Caul_4888 5284221 - 5284778 + | ribosomal protein S16 Caul_4889 5284919 - 5285521 + | 16S rRNA processing protein RimM TERM 3531 5285799 - 5285773 - g 93 -18.2 -3.61764 | GGACGAAGTCGCAAA CTTGATGTCGCA AAA TGCGACATCAAG TTGGGGCGGCCGGCG Caul_4890 5285582 - 5286346 + | hypothetical protein Caul_4891 5287203 - 5286343 - | palmitoyl-CoA hydrolase Caul_4892 5287283 - 5288200 + | histone deacetylase superfamily protein Caul_4893 5288334 - 5288236 - | hypothetical protein Caul_4894 5289025 - 5288606 - | thioesterase superfamily protein Caul_4895 5289525 - 5289022 - | thioesterase superfamily protein Caul_4896 5289581 - 5290588 + | putative mRNA 3-end processing factor Caul_4897 5291145 - 5290714 - | thioesterase superfamily protein Caul_4898 5291250 - 5292869 + | ATP-dependent DNA ligase Caul_4899 5294141 - 5292873 - | Bcr/CflA subfamily drug resistance transporter Caul_4900 5295128 - 5294244 - | hypothetical protein Caul_4901 5295901 - 5295128 - | hypothetical protein Caul_4902 5297125 - 5295965 - | DegT/DnrJ/EryC1/StrS aminotransferase Caul_4904 5299359 - 5298184 - | cystathionine gamma-lyase Caul_4903 5297271 - 5298254 + | MscS mechanosensitive ion channel Caul_4905 5299656 - 5299387 - | hypothetical protein Caul_4906 5299968 - 5299696 - | CopG/Arc/MetJ family addiction module antidote protein Caul_4907 5301431 - 5299992 - | pyridoxal-5'-phosphate-dependent protein beta subunit TERM 3532 5300867 - 5300838 - G 72 -13.5 -3.14211 | ATGCTTGGCCATGAA CCGGCCGACACCC GTCA GGGTGCCGCCCGA GCCGACGCCGACCAC TERM 3533 5301242 - 5301297 + g 95 -19 -3.56325 | gap 1, overlap 5301286 5301292 TGAGGCTGCCGTCGG CCTCGGCCGCCTCGATCATCGACCGGG CCA CGCGGTCCTTGATCGAGCCG-CCGGGG TTCTGGTTCTCGAGC Caul_4908 5301808 - 5301575 - | hypothetical protein TERM 3534 5301898 - 5301865 - R 76 -8.7 -4.2349 | opp_overlap 5301866 5301867, overlap 5301870 TTCGCACACGCAAAA TAGAACGACCCCGGA TCGC TCCGGGGTCGCACGT TATTTCGGCAGGAAA TERM 3535 5301866 - 5301897 + r 76 -10 -3.90744 | opp_overlap 5301865 5301870, overlap 5301867 TCGCACACGCAAAAT AGAACGACCCCGGA TCGC TCCGGGGTCGCACG TTATTTCGGCAGGAA TERM 3536 5301867 - 5301896 + r 74 -13.5 -2.94232 | opp_overlap 5301865 5301870, overlap 5301866 CGCACACGCAAAATA GAACGACCCCGGA TCGC TCCGGGGTCGCAC GTTATTTCGGCAGGA TERM 3537 5301893 - 5301870 - R 100 -18.2 -3.98224 | opp_overlap 5301867 5301866, overlap 5301865 ACACGCAAAATAGAA CGACCCCGGA TCGC TCCGGGGTCG CACGTTATTTCGGCA TERM 3538 5301950 - 5301915 - R 91 -11.8 -4.25283 | gap 1 ATTTCGGCAGGAAAA CCGGCCACCACC-GGTC ATC GACCAGGAAGTGGACGG CCTAGAGAATGGACT Caul_4909 5302605 - 5301952 - | putative translaldolase Caul_4910 5303547 - 5302672 - | glucose-1-phosphate thymidylyltransferase Caul_4911 5304386 - 5303544 - | dTDP-4-dehydrorhamnose reductase Caul_4912 5305485 - 5304436 - | dTDP-glucose 4,6-dehydratase TERM 3539 5305574 - 5305553 - R 73 -10.9 -3.65812 | gap 1 TGGTTCGCAAGACAA GATCGC-GCC CAC GGCGGCGATC AACATTGAGATTCCC Caul_4913 5307062 - 5305728 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Caul_4914 5309194 - 5307143 - | NAD synthetase TERM 3540 5307208 - 5307261 + g 72 -3.6 -4.59853 | overlap 5307209 5307210 AGGCTTCGGCCGACG CATCGGACGGCATGCG-CCAGTCGCC GCGC GGCGACAGGGCGCC-GCCGGACGAAA TTTTTGGGCCGTTGG TERM 3541 5309464 - 5309417 - g 85 -11.2 -4.25104 | gap 1, opp_overlap 5309421 5309422 5309424 TTTCGCCCACCAAAA TGGCCGACGCGATCCGCGTCCTT TCC ATGGACGCGGTCCACAA-GGCCA AGTCCGGACACCAGG Caul_4915 5309395 - 5311356 + | transketolase TERM 3542 5311969 - 5311953 - g 78 -9.3 -4.25104 | CTTCCTGCACGAAAA GCCGGCC AAG GGCTGGC GTCTGCAAAATCCCC Caul_4916 5311456 - 5312616 + | mannose-6-phosphate isomerase Caul_4917 5313734 - 5312613 - | hypothetical protein Caul_4918 5314715 - 5313765 - | NAD-dependent epimerase/dehydratase TERM 3543 5314099 - 5314087 - G 84 -4.8 -4.99043 | TCCGCATAAACAAAA TCGC GCTGG GCGA TGCCGCGACCCCAGC Caul_4919 5314878 - 5315807 + | NAD-dependent epimerase/dehydratase Caul_4920 5315819 - 5316814 + | NAD-dependent epimerase/dehydratase TERM 3544 5316984 - 5316964 - g 88 -11.9 -4.44667 | overlap 5316980 CTCGCCAACAAGAAA GCCCATTTC AGC GAAACGGGC CTGGACCGTCGCCTG Caul_4921 5316811 - 5318220 + | nucleotide sugar dehydrogenase Caul_4922 5318217 - 5319296 + | GHMP kinase Caul_4923 5319293 - 5319862 + | dTDP-4-dehydrorhamnose 3,5-epimerase Caul_4924 5320446 - 5319859 - | hexapaptide repeat-containing transferase TERM 3545 5320581 - 5320603 + H 71 -6.2 -4.34402 | opp_overlap 5320581 5320580 5320578 CGTTGGTTGAAAGAT TGGCCCTAGA CGG TCAAGAGCCA TTTTCGTATCCCACC Caul_4925 5320737 - 5321645 + | endonuclease/exonuclease/phosphatase TERM 3546 5321679 - 5321705 + G 71 -10.9 -3.57144 | opp_overlap 5321678 5321677 CAAGCCTCGACAAGT TCACCTCGATC AATCG GATCGCGGTGA TTTCAGACTCCGCGC Caul_4926 5321654 - 5322859 + | hypothetical protein Caul_4927 5322935 - 5325043 + | hypothetical protein TERM 3547 5325854 - 5325905 + G 90 -16.1 -3.73224 | gap 1, overlap 5325855 TTTTCCGTCCCGTGA CTGAGACCTATCTGACCGACCGAC TCGAT GT-GGTCGGTCAGATGAGTCTCAA TTTCGTCGCGGCTCA TERM 3548 5325855 - 5325904 + G 84 -19.6 -2.8372 | gap 1, overlap 5325854 TTTCCGTCCCGTGAC TGAGACCTATCTGACCGACCGAC TCGAT GT-GGTCGGTCAGATGAGTCTCA ATTTCGTCGCGGCTC Caul_4928 5325043 - 5326041 + | FkbM family methyltransferase Caul_4929 5327467 - 5325995 - | TPR repeat-containing protein Caul_4930 5328579 - 5327482 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3549 5328314 - 5328300 - G 83 -9.2 -4.62302 | CAATATCCGCAAAAA CGGGCG TCG CACCCG CGTGCAGAACGATCA Caul_4931 5328893 - 5329543 + | ABC-2 type transporter protein Caul_4932 5329551 - 5330303 + | ABC transporter related Caul_4933 5331528 - 5330323 - | histidinol-phosphate phosphatase family protein Caul_4934 5332672 - 5331554 - | FAD dependent oxidoreductase TERM 3550 5333055 - 5333009 - g 86 -12.9 -4.11216 | gap 1, opp_overlap 5333009 GTCCGACGCCGAAAA GGCCAAGGGCGTCATCG-CGGC CAGC GCCGGCAACCACGCCCAGGGCC TTGCCTATCACGGCG Caul_4935 5332797 - 5334008 + | threonine dehydratase TERM 3551 5334028 - 5334045 + T 76 -12.7 -3.44848 | overlap 5334027 TCAGGTGCGCCGACT GCTCCCC AAAA GGGGAGC TATTTGCTACAGCAG Caul_4936 5334918 - 5334052 - | nucleotidyl transferase TERM 3552 5335202 - 5335184 - g 73 -10.2 -3.82433 | opp_overlap 5335183, overlap 5335170 AGAAGCAGCAGGAAA GCCTGGCC GCC GCCCAGGC CTTCATGGCCCAGAA Caul_4937 5335090 - 5335608 + | peptidylprolyl isomerase FKBP-type Caul_4938 5336242 - 5335610 - | glutathione S-transferase domain-containing protein TERM 3553 5335663 - 5335712 + g 70 -12 -3.30771 | gap 1, opp_overlap 5335616, overlap 5335665 CGCGCTCGCCGATCC GCTGCAGCCAGGCCCGCACCGCC GGCAA GGCGG-GCCGGTCGGGCTGGATC TTCTCCAGCGTCTCC TERM 3554 5335665 - 5335710 + g 72 -13.2 -3.22102 | gap 1, opp_overlap 5335616, overlap 5335663 CGCTCGCCGATCCGC TGCAGCCAGGCCCGCACCGCC GGCAA GGCGG-GCCGGTCGGGCTGGA TCTTCTCCAGCGTCT Caul_4939 5336341 - 5337615 + | acetylornithine deacetylase Caul_4940 5338594 - 5337584 - | glycosyl transferase family protein TERM 3555 5339613 - 5339667 + G 70 -9 -3.85698 | CCTGCTGCTGGCCGA GGCCATGGCCGCCGGCAAGGCCGTGG TGG CGACGGGCTGGTCGGCCAACATGGAC TTTATGGACGCGGAG TERM 3556 5339775 - 5339746 - g 90 -9.9 -4.72272 | overlap 5339772 GGTCTGTACCAAAAA GGCGTCTGGGCCG AGCC CGACACAGAGGCC GCCGGCCGGGCCCTC Caul_4941 5338696 - 5339940 + | glycosyl transferase group 1 Caul_4942 5339937 - 5340509 + | dTDP-4-dehydrorhamnose 3,5-epimerase Caul_4943 5340506 - 5341378 + | alpha/beta hydrolase fold Caul_4944 5342499 - 5341375 - | hypothetical protein TERM 3557 5342042 - 5342059 + g 73 -7.7 -4.18018 | gap 1, overlap 5342026 TGCCAGCCCAGGCCG GCGCGCTG GGC CAGCG-GC TTTTCCATCAGCGGC TERM 3558 5342519 - 5342557 + r 74 -5.1 -4.58395 | opp_overlap 5342540, overlap 5342514 5342522 CTGACCGGTCTGTGG GCCGCCCTCGTCCTTCG ACAAG CTCAGGATGAGGGCTAC TTTTTGCGGCGTCGG Caul_4945 5343343 - 5342645 - | glutathione S-transferase domain-containing protein TERM 3559 5343283 - 5343245 - G 93 -21 -3.16742 | CTGAACCTCGACGAA CGGCAGGCGCTTCTCGCC CAG GGCGAGACGCACCTGGCG CGAGGCCGGGTCCAG TERM 3560 5343346 - 5343372 + r 77 -4.4 -4.86731 | gap 1, overlap 5343347 TGCCCACGCGCATTC AGGCTGCATCG TTCGAT CGATGC-GCCG TTTTGTTTAACAAGA TERM 3561 5343580 - 5343552 - R 74 -5.2 -4.57569 | opp_overlap 5343552 5343563, overlap 5343553 5343576 CGAGCGGTGGAAAAA CCTCATCCTGAG CCTGT CGAAGGACGAGG CTTTCAACCCCGGTG Caul_4946 5345062 - 5343596 - | rfaE bifunctional protein Caul_4947 5346082 - 5345144 - | cation diffusion facilitator family transporter TERM 3562 5345582 - 5345636 + g 82 -14.1 -3.7282 | gap 1 CGACACGGCGTTCGA GGCCAGGTCGGCGGCGTAGT-GGGCG CGGT CGCCCGACACCGCCACCGAGCGGGTC TTCTTGGTCACCTCG TERM 3563 5345709 - 5345736 + g 79 -14.9 -3.28712 | gap 1 ACCATGACCCCGACC CCCAGCGCGCCG TGCTC CGGCG-GCTGGG TTCTGAAGAGAGCGC Caul_4948 5347278 - 5346184 - | citrate synthase 2 Caul_4949 5347471 - 5348619 + | citrate synthase Caul_4950 5353287 - 5348758 - | glutamate synthase (ferredoxin) TERM 3564 5350707 - 5350738 + g 73 -7.9 -4.18018 | GGTTGCGGTCCGAGC GCCAGTCCAGCAG GTCCCG CAGCTGGATCGGC TTTTGGGTGCGCAGG TERM 3565 5351598 - 5351632 + g 74 -12.8 -3.61715 | opp_overlap 5351592 5351590 GCACATAGACGTCGG CCTGGGCCGCGTCCTG GGC CAGGATGTTGCCGAGG TTCTTGAACCGGGTC Caul_4951 5354876 - 5353431 - | putative oxidoreductase Caul_4952 5355155 - 5355964 + | undecaprenol kinase TERM 3566 5356032 - 5356046 + T 78 -7.1 -4.63184 | opp_overlap 5356032, overlap 5356023 5356037 TACCTCGTGCAAAAA GGCCT GGCGG AGGCC TTTTTGAAGTCCATT TERM 3567 5356046 - 5356032 - T 78 -7.1 -4.57073 | opp_overlap 5356032 5356023 5356037 TACCTCGTGCAAAAA GGCCT GGCGG AGGCC TTTTTGAAGTCCATT TERM 3568 5356244 - 5356220 - T 71 -11.4 -3.53444 | overlap 5356221 CTAGCCGTCGCGAAA TCCCTCTCCC CTTGC GGGAGAGGGC GCCCCCACGGAGTGG TERM 3569 5356243 - 5356221 - T 75 -14.9 -2.71924 | overlap 5356220 TAGCCGTCGCGAAAT CCCTCTCCC CTTGC GGGAGAGGG CGCCCCCACGGAGTG TERM 3570 5356289 - 5356318 + T 100 -18.5 -4.04579 | opp_overlap 5356289 TTGAAGAACGCAAAA GCCGCGCCCGGCC TTTC GGCTGGACGCGGC TTTAATGTTTATCGA TERM 3571 5356318 - 5356289 - T 100 -18.5 -4.36127 | opp_overlap 5356289 TTGAAGAACGCAAAA GCCGCGCCCGGCC TTTC GGCTGGACGCGGC TTTAATGTTTATCGA Caul_4953 5357343 - 5356387 - | NADH dehydrogenase Caul_4954 5357808 - 5358425 + | 3'-5' exonuclease Caul_4955 5358436 - 5359074 + | hypothetical protein TERM 3572 5359293 - 5359254 - g 74 -12 -3.61398 | overlap 5359255 CGGCGGCGGCAACAA CTCCAGCGCGCCGGTGGA CATC TCCGCCGACGAGCAGGAA GTGATCACCAGCCAG Caul_4956 5359144 - 5359734 + | OstA family protein Caul_4957 5359741 - 5360511 + | ABC transporter related TERM 3573 5360641 - 5360626 - f 78 -4.6 -4.77165 | overlap 5360627 GGTGGGACAATAAAA GCCGAG ATAT CTCGGG ACGGATGGTCGCAAC Caul_4958 5360746 - 5362254 + | RNA polymerase factor sigma-54 Caul_4959 5362311 - 5362922 + | exopolysaccharide synthesis ExoD TERM 3574 5363390 - 5363436 + G 71 -10.9 -3.65351 | gap 1, opp_overlap 5363428 CGCCGGCGCGCCGGC CGG-CATGATCATCGCCGAGAC CCAG GCCTCGCTGAAGATCATGACCG TTTCCATGGCGGTCA Caul_4960 5362974 - 5363606 + | sigma 54 modulation protein/ribosomal protein S30EA Caul_4961 5363715 - 5364185 + | PTS IIA-like nitrogen-regulatory protein PtsN TERM 3575 5364393 - 5364358 - T 84 -17.6 -2.72227 | AAGATGTGGGAAGCA CGATCGCCACCGGCCA CATC CGGCCGATGGCGATCC AAGACGTCTAGTGCA Caul_4962 5364673 - 5364401 - | hypothetical protein Caul_4963 5365185 - 5364760 - | heat shock protein Hsp20 Caul_4964 5365857 - 5365492 - | hypothetical protein Caul_4965 5366047 - 5365871 - | hypothetical protein Caul_4966 5369363 - 5366082 - | hypothetical protein Caul_4967 5370227 - 5369403 - | dihydrodipicolinate reductase Caul_4968 5370497 - 5372785 + | malic enzyme Caul_4969 5372889 - 5373062 + | hypothetical protein Caul_4970 5375611 - 5374010 - | GSCFA domain-containing protein TERM 3576 5374930 - 5374947 + g 71 -9.9 -3.67775 | TCGCGTCAGGATTGA TCGATCG GATA CGATCGA TTGTTCGCTGCAGGT TERM 3577 5375185 - 5375168 - G 90 -7.7 -5.03314 | GCGACGCTCAAAAAA TCGGTCG AGGC CAACCGA GACGTGGTCCGCCAG TERM 3578 5375903 - 5375955 + G 100 -25.6 -2.8547 | gap 1, opp_overlap 5375895 5375938 TCCAATACGGGACGC GGGCGACGGGGCCGGCGC-GGCG CCCCCACA CGCAAGCGCCGGCCCCGTCGCCG TCTGATCTGGCCGCT TERM 3579 5376056 - 5376034 - g 91 -3.3 -5.45726 | gap 1 GACATCCTAAAAAAA GCCGCGCTCA TCTT CG-GAGCGGC CTCCCGATGAAGTTC Caul_4971 5375752 - 5376066 + | transposase IS3/IS911 family protein TERM 3580 5376625 - 5376615 - g 75 -4.6 -4.56775 | opp_overlap 5376597 ATCGCGCGCCAAAAA CCCG CGC CAGG CCTTATTCATCATTC Caul_4972 5376063 - 5376923 + | integrase catalytic region Caul_4973 5378287 - 5377127 - | hypothetical protein TERM 3581 5378166 - 5378141 - G 73 -8.1 -4.13767 | opp_overlap 5378142, overlap 5378142 5378145 TCCGCCACCGTAAAA GCGACGCGGCA CCTG CGGCGCGGCGC GTTCGTGGACTAAAG Caul_4974 5379654 - 5378683 - | glucokinase TERM 3582 5379763 - 5379814 + G 73 -12.8 -3.46509 | gap 1, opp_overlap 5379751 5379750, overlap 5379753 5379752 GATCTGCGGCCTCTC GACGCTGGACGCGGTGACCGCCGCC GTC GCCGGCGGG-GCCGCGTTCGTCGGC TTCGTGTTCTTCGAG Caul_4975 5379734 - 5380375 + | N-(5'-phosphoribosyl)anthranilate isomerase Caul_4976 5380392 - 5381624 + | tryptophan synthase subunit beta Caul_4977 5381636 - 5382463 + | tryptophan synthase, alpha subunit TERM 3583 5382860 - 5382819 - g 75 -16.5 -2.83747 | gap 1, overlap 5382816 CAAGCCCTACAAGGA GCG-CCTGGCCGCCGCCCGC AAG GCGACCGGCGAGCAGGACGC CATGGCCATCGGCTA Caul_4978 5382475 - 5383401 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit Caul_4979 5383519 - 5384832 + | FolC bifunctional protein Caul_4980 5385104 - 5384829 - | hypothetical protein TERM 3584 5385208 - 5385187 - H 100 -13.7 -5.00616 | GCGCCCGGCAAAAAA GCTCGGCCG TGAG CGGCCGAAC CTGAACGCCAGATGA Caul_4981 5385332 - 5385667 + | 17 kDa surface antigen TERM 3585 5385727 - 5385697 - T 73 -13.3 -3.14878 | gap 1, opp_overlap 5385698, overlap 5385695 5385700 CCGCCGAACTGAAGA GGACCCGGACCGGC GAAA GCCG-TCCGGGTCT TTTGGCGTCAGCGTA TERM 3586 5385698 - 5385726 + T 100 -16.8 -4.13945 | gap 1, opp_overlap 5385697 5385695 5385700 CGCCGAACTGAAGAG GACCCGGACCGGC GAAA GCCG-TCCGGGTC TTTTGGCGTCAGCGT TERM 3587 5385724 - 5385700 - T 72 -13.6 -2.77791 | gap 1, opp_overlap 5385698, overlap 5385697 5385695 CCGAACTGAAGAGGA CCCGGACCGGC GAAA GCCG-TCCGGG TCTTTTGGCGTCAGC Caul_4982 5386247 - 5385735 - | periplasmic protein thiol--disulphide oxidoreductase DsbE Caul_4983 5386411 - 5386244 - | heme exporter protein CcmD Caul_4984 5387134 - 5386415 - | heme exporter protein CcmC Caul_4985 5387779 - 5387210 - | hypothetical protein Caul_4986 5387943 - 5388293 + | hypothetical protein TERM 3588 5388338 - 5388374 + F 74 -11.6 -3.48276 | overlap 5388318 5388358 TCCACGCTCGATGCG TGGTCCTCGTCCTTCG ACAGG CTCAGGATGAGGACCA TTCTATCGGCCCGGA TERM 3589 5388428 - 5388400 - f 71 -5.2 -4.50976 | opp_overlap 5388358 5388400 5388401 5388412, overlap 5388395 5388401 CCGGACAGTAGAAAA CCTCATCCTGAG CTTGT CGAAGGACGAGG TTTTCGTCTCAGACC Caul_4987 5388513 - 5389412 + | hypothetical protein TERM 3590 5389629 - 5389649 + T 83 -9.7 -4.25104 | overlap 5389618 ACGCGGCAGGTCCCT CCCTCTCTC TAA GAGAGAAGG TTTTGGTGGGCGCCG Caul_4988 5390330 - 5389665 - | heme exporter protein CcmB TERM 3591 5390289 - 5390250 - G 79 -14.8 -3.31461 | GACGCAGGCGTAGAA GGCCAGGGCCAGCAGCGG TCCG CCGCCGGCGCCCCAGGCC AGGGCCAGCTCGCGG Caul_4989 5390941 - 5390327 - | heme exporter protein CcmA TERM 3592 5393211 - 5393195 - g 71 -10.1 -3.71848 | CGGTTCGATCAAGAA GACCAGC CCT GCTGGCC AGTACCTGATCGACC Caul_4990 5391135 - 5393822 + | aconitate hydratase TERM 3593 5393858 - 5393890 + F 100 -18.5 -3.76413 | opp_overlap 5393858 5393864, overlap 5393864 CGCAGGTCTGGAAAA GACGAAGCCGGACCC CCT GGGTCCGGCTTTTTC TTTGGCCTTTTCGCG TERM 3594 5393890 - 5393858 - f 100 -16.3 -4.08767 | opp_overlap 5393858 5393864, overlap 5393864 CGCAGGTCTGGAAAA GACGAAGCCGGACCC CCT GGGTCCGGCTTTTTC TTTGGCCTTTTCGCG TERM 3595 5393884 - 5393864 - f 100 -18.3 -3.53779 | opp_overlap 5393864 5393858, overlap 5393858 TCTGGAAAAGACGAA GCCGGACCC CCT GGGTCCGGC TTTTTCTTTGGCCTT TERM 3596 5393864 - 5393884 + F 100 -18.3 -5.29846 | opp_overlap 5393858 5393864, overlap 5393858 TCTGGAAAAGACGAA GCCGGACCC CCT GGGTCCGGC TTTTTCTTTGGCCTT Caul_4991 5393991 - 5394707 + | hypothetical protein TERM 3597 5394826 - 5394796 - f 100 -16.2 -5.28942 | gap 1, opp_overlap 5394825 CACCCCAAAGAAAAA GCCCGCGCAC-CG AGGGGA CGAGTGCGCGGGC CTCTCAGGGGAGGGG TERM 3598 5395066 - 5395037 - f 100 -16.4 -4.34402 | opp_overlap 5395028 5395027 GCGCCCATACGAAAA CCCCGCGTGGAG AGGGGG CGCCACGCGGGG TCTCGAACTGTCTGC TERM 3599 5395382 - 5395404 + G 75 -4.6 -4.63932 | overlap 5395385 GGATTCCCGCCCCCC CATCTCCGGC GTT GCCGGCGTCG TTTTCTTCGAGCGTC Caul_4992 5395359 - 5395697 + | hypothetical protein TERM 3600 5395766 - 5395803 + T 75 -11.9 -3.55444 | opp_overlap 5395773, overlap 5395773 TTCGCGAGGGAGGAA TAAAAAAGCCCCGGCGG TTTC CCGCCGGGGCTTCGTCG TTTCAGACCTCAGGC TERM 3601 5395796 - 5395773 - T 100 -21 -5.5112 | opp_overlap 5395766 5395773 GGGAGGAATAAAAAA GCCCCGGCGG TTTC CCGCCGGGGC TTCGTCGTTTCAGAC TERM 3602 5395773 - 5395796 + T 95 -21 -3.32769 | opp_overlap 5395773, overlap 5395766 GGGAGGAATAAAAAA GCCCCGGCGG TTTC CCGCCGGGGC TTCGTCGTTTCAGAC Caul_4993 5396565 - 5395819 - | hypothetical protein TERM 3603 5396254 - 5396287 + g 80 -16.1 -3.14132 | gap 1, opp_overlap 5396259 CGAGACGATCGACCA GTAGATCACC-CCCGC CGT GCGGGCGGTGATCGAC TTCATCAGGAAGCCC TERM 3604 5396850 - 5396813 - g 77 -14.9 -3.18681 | gap 1, opp_overlap 5396818 GCGGAAGCCCACGAA CAGATGGACTACGCCCTG GGG CAGGGCGT-GACCTTCTG GGACACCGCCGAGAT TERM 3605 5396818 - 5396845 + G 70 -12 -3.28712 | gap 1, opp_overlap 5396813 AGCCCACGAACAGAT GGACTACGCCCTG GGG CAGGGCGT-GACC TTCTGGGACACCGCC Caul_4994 5396711 - 5397763 + | aldo/keto reductase Caul_4995 5397923 - 5398459 + | 2'-5' RNA ligase Caul_4996 5398561 - 5399025 + | hypothetical protein Caul_4997 5399037 - 5400416 + | mercuric reductase TERM 3606 5400474 - 5400423 - T 89 -10.8 -4.28254 | gap 1, opp_overlap 5400456, overlap 5400425 5400426 5400442 CTGGAATAGCCAAAA CAGTTGTC-ATCCCGGACAAGCGCG CAG CGCGCCGATCCGGGATCGACGCGTG AACGCAAGCGCTTCC TERM 3607 5400471 - 5400425 - T 76 -10.9 -3.741 | opp_overlap 5400456, overlap 5400423 5400426 5400442 GGAATAGCCAAAACA GTTGTC-ATCCCGGACAAGCGCG CAG CGCGCCGATCCGGGATCGACG-C GTGAACGCAAGCGCT TERM 3608 5400479 - 5400442 - T 82 -14.9 -3.30124 | gap 1, opp_overlap 5400456, overlap 5400425 5400426 5400423 TGTCATCCCGGACAA GCGCGCAGCGCGCCGATC CGG GATCGACGCG-TGAACGC AAGCGCTTCCGGCGG Caul_4998 5400979 - 5400539 - | leucine-rich repeat-containing protein Caul_4999 5401356 - 5400976 - | hypothetical protein TERM 3609 5401287 - 5401277 - G 72 -8.2 -4.03234 | CCGTTGCGATAGAAA CCGG TCA CCGG GTTGAGCGAGCAGGG Caul_5000 5401497 - 5402375 + | citrate (pro-3S)-lyase Caul_5001 5402397 - 5403446 + | hypothetical protein Caul_5002 5403898 - 5403473 - | histidine triad (HIT) protein Caul_5003 5404940 - 5403891 - | dehydratase TERM 3610 5403932 - 5403966 + g 74 -14.3 -3.29144 | gap 1 AGTAGTCGAAGTCGA GGATGACGCCGGGCGC GTAG GC-CCCGGCCTCGTCC TTGTCGGGGAAGTCG TERM 3611 5405515 - 5405493 - g 75 -6.8 -4.4078 | CCTGCCCAAGGAAAA GGTCATCGGC ATG GCCGGCGTCC TGGACTCGGCGCGCT TERM 3612 5405970 - 5405958 - g 78 -9.1 -4.33105 | CAACGACGAGGAAAA GGCGA TGT TCGCC AAGTCCGTCGAGTCG Caul_5004 5405074 - 5406036 + | malate dehydrogenase TERM 3613 5406058 - 5406093 + T 100 -22 -3.90318 | opp_overlap 5406058 5406064, overlap 5406064 TCGGCCTTCGGAAAT GAGAAAGGGCGGCTCC TCAC GGGGCCGCCCTTTTTC TTTGTGCGATGATCA TERM 3614 5406093 - 5406058 - T 84 -17.6 -2.71712 | opp_overlap 5406058 5406064, overlap 5406064 TCGGCCTTCGGAAAT GAGAAAGGGCGGCTCC TCAC GGGGCCGCCCTTTTTC TTTGTGCGATGATCA TERM 3615 5406064 - 5406087 + T 100 -17.4 -5.38054 | opp_overlap 5406058 5406064, overlap 5406058 TTCGGAAATGAGAAA GGGCGGCTCC TCAC GGGGCCGCCC TTTTTCTTTGTGCGA TERM 3616 5406087 - 5406064 - T 100 -15.2 -4.13654 | opp_overlap 5406064 5406058, overlap 5406058 TTCGGAAATGAGAAA GGGCGGCTCC TCAC GGGGCCGCCC TTTTTCTTTGTGCGA TERM 3617 5406252 - 5406200 - T 70 -12.5 -2.87132 | opp_overlap 5406214, overlap 5406159 5406230 CTGGGGGCGGACAGA CGGCGAAGCCGTCAGGTGGGGGC AAGTAGA GCCGCCGCCTTACTGCGCCGCCG CGTCCGCCGGCTCGG Caul_5005 5406673 - 5406239 - | signal-transduction protein Caul_5006 5406799 - 5407305 + | hypothetical protein TERM 3618 5408320 - 5408337 + F 77 -14.1 -3.30124 | CGGTCCCGGACCTTC CCCCGGC TTTC GCCGGGG TTGTCCGGGATGACA TERM 3619 5409629 - 5409607 - g 77 -15.6 -3.19463 | overlap 5409608 GTCACCATGTACGAA CTGGTGCCGG CCG CCGGCACCAA GACCGCCCGGGTCGT TERM 3620 5409628 - 5409608 - g 73 -16.9 -2.51464 | overlap 5409607 TCACCATGTACGAAC TGGTGCCGG CCG CCGGCACCA AGACCGCCCGGGTCG Caul_5007 5408512 - 5410935 + | cell divisionFtsK/SpoIIIE Caul_5008 5411142 - 5411780 + | outer membrane lipoprotein carrier protein LolA TERM 3621 5411970 - 5411995 + F 100 -16.2 -5.1166 | GAGAGACCCGACTTT CGCCCAGACG CTCTGT CGTCTGGGCG TTTTTCGTTTTGGTC Caul_5009 5412185 - 5412991 + | exodeoxyribonuclease III Xth TERM 3622 5414733 - 5414694 - g 86 -14.3 -3.83026 | CGCGCGGAGATGAAA TCGCATCGGCCGGGCTT GCTGGA AAGCCGGGCCGACGCCA TGAGGCCGTAGGCAA Caul_5010 5414502 - 5414744 + | hypothetical protein Caul_5011 5415634 - 5414918 - | DNA polymerase III, epsilon subunit TERM 3623 5415577 - 5415603 + g 71 -9.5 -3.70902 | overlap 5415572 5415579 5415583 TTTCGACCAGCCGGT CC-CCGGTCTTCG GAT CGAAG-CCGGTGG TTTCCGTATCGAGGA Caul_5012 5416264 - 5415641 - | dephospho-CoA kinase Caul_5013 5417118 - 5416261 - | shikimate 5-dehydrogenase Caul_5014 5417723 - 5417115 - | Maf family protein Caul_5015 5418622 - 5417720 - | hypothetical protein Caul_5016 5419078 - 5420118 + | uroporphyrinogen decarboxylase Caul_5017 5420115 - 5421161 + | ferrochelatase TERM 3624 5421393 - 5421417 + G 70 -8.5 -3.91897 | TGCTGTTGGCCATGG TCGACACCCAG CGC CTGGGTCCCGA TTTCTACCTGCGGCC Caul_5018 5421161 - 5421625 + | hypothetical protein TERM 3625 5421631 - 5421657 + F 74 -12.3 -3.51825 | gap 1 GGGCCACTAGCTTCA GCGGCTCCGCTT GACC AGGCGG-GCCGC TTGTGGTTCCCATCC Caul_5019 5421889 - 5423310 + | transcription termination factor Rho TERM 3626 5423369 - 5423332 - T 77 -13.3 -3.59979 | opp_overlap 5423338 5423350, overlap 5423335 TTGTCGCACGTGAAA CATTGAGGGCGGCGGGA GTGA TCCCGCCGCCCTTTGCG TGGGGGAGGGACATA TERM 3627 5423366 - 5423335 - T 77 -15.8 -2.62613 | opp_overlap 5423338 5423350, overlap 5423332 TCGCACGTGAAACAT TGAGGGCGGCGGGA GTGA TCCCGCCGCCCTTT GCGTGGGGGAGGGAC TERM 3628 5423338 - 5423363 + T 100 -21.9 -3.64703 | opp_overlap 5423335 5423332, overlap 5423350 CACGTGAAACATTGA GGGCGGCGGGA GTGA TCCCGCCGCCC TTTGCGTGGGGGAGG Caul_5020 5424423 - 5423458 - | alcohol dehydrogenase TERM 3629 5424127 - 5424166 + g 70 -12.2 -3.28712 | CACGGCGCGGTCGGC CGGCACG-ACGGCCGCCT CGGCAT AGGCG-CCGAGCGTGCCG TTATAGGCGACGCGA TERM 3630 5424402 - 5424365 - G 74 -15.5 -3.05384 | gap 1, opp_overlap 5424360 5424391 GGCGTGGGGACGGAA CGCTC-GACGGCCTCGAG AAC CTCGGGGCCGCCGGTGCG GGCGGCTTGTATGGC Caul_5021 5425137 - 5424430 - | carboxymethylenebutenolidase Caul_5022 5425252 - 5425509 + | hypothetical protein TERM 3631 5425662 - 5425682 + G 70 -12.5 -3.26433 | CAGCTGACACGGGAT GGCGTCGCC TTG GACGACGCC TTGGTGCTCTGGTTC Caul_5023 5425506 - 5426849 + | tRNA modification GTPase TrmE Caul_5024 5427014 - 5428870 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Caul_5025 5428870 - 5429535 + | methyltransferase GidB Caul_5026 5429519 - 5430331 + | cobyrinic acid ac-diamide synthase Caul_5027 5430418 - 5431311 + | parB-like partition protein Caul_5028 5432667 - 5431615 - | DNA polymerase III subunit delta TERM 3632 5431818 - 5431840 + g 78 -12.6 -3.7941 | opp_overlap 5431803 5431804 CGCCCGAAGCCTTGG CGGCGGCGGC CAG GTCGACGCCG TTCTTGTGCAGGGTC Caul_5029 5433247 - 5432735 - | hypothetical protein TERM 3633 5432977 - 5433000 + g 70 -8.8 -3.90291 | gap 1 TGGCGACGTTGTCGA CGCG-AACGCC GCG GGCGTAGCGCG TTTCGTTGACGCCAT Caul_5030 5435836 - 5433251 - | leucyl-tRNA synthetase TERM 3634 5433901 - 5433947 + g 72 -8.4 -3.97139 | opp_overlap 5433895 5433893, overlap 5433911 TCACGAACAGGCGGG CGGCGTCGACGCCGTAGGCCTC GAA GATGTCCTCGGGGGCGACGACG TTCTTCTTGGACTTC Caul_5031 5436550 - 5436038 - | hypothetical protein Caul_5032 5436827 - 5437243 + | hypothetical protein Caul_5033 5437853 - 5437248 - | thiamine monophosphate synthase TERM 3635 5437497 - 5437443 - G 72 -13.5 -3.24747 | gap 3, overlap 5437427 5437444 CGGCGACACCACCAA GGCG-TCGGCGCCCGCGGC-GGCGGC GGCGAT GCCGCCCGCCGCTT-CGCCGTGCGCC GCCAGGGTGATCAGC TERM 3636 5438206 - 5438232 + G 89 -19.4 -3.35992 | CTGGCCGGCGAGATC CAGGCCCGGGGC AAG GCGCCGGGCCTG TTCGTTCAGGTCAAT Caul_5034 5437879 - 5438523 + | alanine racemase domain-containing protein Caul_5035 5439096 - 5438584 - | hypothetical protein Caul_5036 5439167 - 5439865 + | two component transcriptional regulator TERM 3637 5439911 - 5439894 - T 77 -14.1 -3.30124 | overlap 5439875 TGTCATCCCGGACAA CCCCGGC GCAA GCCGGGG GCAGATCCGGGACCG TERM 3638 5440010 - 5440035 + T 76 -5.9 -4.66537 | opp_overlap 5440010, overlap 5440005 TTTAGGTATGAAAAA GCCCCAACCGC ATCA GCGACCGGGGC TTTTGTCTTCAAACG TERM 3639 5440035 - 5440010 - T 100 -12.5 -4.7497 | opp_overlap 5440010 5440005 TTTAGGTATGAAAAA GCCCCAACCGC ATCA GCGACCGGGGC TTTTGTCTTCAAACG Caul_5037 5440557 - 5440063 - | protein-export protein SecB Caul_5038 5440731 - 5441330 + | import inner membrane translocase subunit Tim44 Caul_5039 5441330 - 5442475 + | MltA domain-containing protein Caul_5040 5442480 - 5443019 + | Smr protein/MutS2 Caul_5041 5443395 - 5443072 - | phosphoribosyl-ATP diphosphatase Caul_5042 5444174 - 5443392 - | imidazoleglycerol phosphate synthase, cyclase subunit TERM 3640 5443537 - 5443490 - G 78 -16.2 -3.09492 | gap 1 CGCCGAAGTGGAAGA TCGAGGCGGCCAGC-ACGGCGGC GGC GTGGCCGTCGCGGGCGGCCTCGA CCAGGTGGTCGGTCG Caul_5043 5444899 - 5444174 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Caul_5044 5445537 - 5444896 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 3641 5445311 - 5445289 - G 73 -9.8 -3.88787 | opp_overlap 5445285 5445303 GCAGATGCCGAGAAA CGGCGCGC CCTTGCC GCGCACCG CCTCGTTCATGGCCT Caul_5045 5446141 - 5445551 - | imidazoleglycerol-phosphate dehydratase TERM 3642 5445874 - 5445902 + g 72 -13.2 -3.16564 | opp_overlap 5445857, overlap 5445878 CGTGGCCGAAGCGCC GGACGCCCTTGA ACCCG TCAAGGGCTTCC TTGATCGCCTGACCC Caul_5046 5447139 - 5446150 - | ribokinase-like domain-containing protein TERM 3643 5446319 - 5446332 + g 78 -6.7 -4.57073 | TGGTCGCCGGCGCCG GTCGT GTCC ACGAC TTTTTCCACCGGATA TERM 3644 5446923 - 5446909 - G 70 -9.2 -3.86015 | GACCTTGCCGATAAA GGCGAC CTT GCCGCC AAAGCTGGCGACGCC Caul_5047 5447364 - 5448107 + | hypothetical protein Caul_5048 5448826 - 5448116 - | endonuclease III Caul_5049 5448892 - 5449368 + | hypothetical protein TERM 3645 5449380 - 5449408 + F 71 -5.2 -4.46212 | opp_overlap 5449380 5449381 5449397, overlap 5449397 CTGAGGGGCCGAAAA CCTCGTCCTTCG ACAAG CTCAGGATGAGG TTTTCTACTCGCCGG Caul_5050 5449533 - 5450414 + | AraC family transcriptional regulator Caul_5051 5450508 - 5451581 + | hypothetical protein Caul_5052 5452866 - 5451571 - | ATP-dependent protease ATP-binding subunit Caul_5053 5453699 - 5452863 - | hypothetical protein Caul_5054 5454336 - 5453773 - | ATP-dependent protease peptidase subunit Caul_5055 5454378 - 5455130 + | UBA/THIF-type NAD/FAD binding protein Caul_5056 5455205 - 5456719 + | succinate CoA transferase Caul_5057 5456801 - 5457196 + | globin Caul_5058 5458202 - 5457216 - | glyoxylate reductase Caul_5059 5458260 - 5458808 + | hypothetical protein Caul_5060 5458901 - 5459416 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 3646 5459595 - 5459573 - g 88 -14.8 -3.75153 | overlap 5459545 CTGCGTGAAGCCAAA TCCGGCGTGG TTT CCGCGCCGGA CTATGCGGAACTGGG Caul_5061 5459483 - 5460697 + | Beta-ketoacyl synthase Caul_5062 5460701 - 5461708 + | hypothetical protein Caul_5063 5461698 - 5462615 + | phytanoyl-CoA dioxygenase Caul_5064 5462782 - 5463597 + | short-chain dehydrogenase/reductase SDR TERM 3647 5463794 - 5463780 - T 78 -3.4 -5.07652 | overlap 5463782 TGCGTTAAAACAAAA GCCTAG AGC CCCGGC CTGATGCAATCAGGT Caul_5065 5464429 - 5463821 - | TetR family transcriptional regulator Caul_5066 5466061 - 5464463 - | EmrB/QacA family drug resistance transporter Caul_5067 5467187 - 5466084 - | secretion protein HlyD family protein TERM 3648 5467273 - 5467258 - R 76 -9 -3.97368 | CCGGCAAGGGATAAA TGGACG CACC CGTCCA AAAATCAAGGGTGGC Caul_5068 5467728 - 5467309 - | GreA/GreB family elongation factor Caul_5069 5468779 - 5468321 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Caul_5070 5469984 - 5468776 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase Caul_5071 5470142 - 5470705 + | hypothetical protein TERM 3649 5470971 - 5470954 - T 77 -14.1 -3.30124 | opp_overlap 5470965 TGTCATCCCGGACAA CCCCGGC GAAA GCCGGGG GCAGATCCGGGACCG Caul_5072 5472688 - 5471186 - | 2-polyprenylphenol 6-hydroxylase Caul_5073 5473352 - 5472906 - | RpiB/LacA/LacB family sugar-phosphate isomerase Caul_5074 5474169 - 5473411 - | ubiquinone/menaquinone biosynthesis methyltransferase Caul_5075 5474338 - 5475201 + | formamidopyrimidine-DNA glycosylase Caul_5076 5476060 - 5475245 - | NAD-dependent epimerase/dehydratase TERM 3650 5476046 - 5476030 - G 70 -12.3 -3.28712 | GGCGCGCGCCCACAA GACCGGT CGT ACCGGTC AGCAGGATCGTCATG Caul_5077 5476518 - 5476057 - | MarR family transcriptional regulator Caul_5078 5476643 - 5477431 + | enoyl-CoA hydratase/isomerase TERM 3651 5477612 - 5477596 - g 75 -8.7 -4.15044 | CCCGGCGCCAAGAAA GCGATCC GCA AGATCGC TCGTCGCACCGAAGT Caul_5079 5477569 - 5477844 + | ribosomal protein S20