TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.582304 %AT, 903043 nt, 7558 terms. Intergenic: 0.615858 %AT, H2T: 108778 nt, 850 terms; T2T: 30890 nt, 432 terms; H2H: 45328 nt, 724 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|166153973|ref|NC_010287.1| Chlamydia trachomatis 434/Bu, complete genome (length 1038842) hemB 1 - 1017 + | delta-aminolevulinic acid dehydratase TERM 1 1063 - 1087 + T 95 -12.3 -3.92542 | opp_overlap 1062, overlap 1047 AGGAGGTTACCACAT TCTCTTTTGCG TAG CGTAAAAGAGA TTCTTTGACGATAGA nqrA 2440 - 1043 - | Na(+)-translocating NADH-quinone reductase subunit A TERM 2 2013 - 1999 - G 73 -2.8 -5.13741 | opp_overlap 2001, overlap 2001 CTAAGTTAATAAAAA CATCTC GAG GAGATT GTGTTGGAAGAGCTG TERM 3 2366 - 2354 - G 71 -9.1 -3.27676 | overlap 2352 2350 ATCCACGGAAACATA GGTGG GGT CCACC TTACCGCAAAAACCC CTL0003 2896 - 2462 - | hypothetical protein TERM 4 2546 - 2566 + g 80 -9.1 -4.00756 | AGATTTGTGGGATGA GTGACCAAT ATC ATTGGTTAC TTCTTTGATAAGCTC TERM 5 2733 - 2745 + g 76 -2.7 -5.28755 | TCCTGCGATCTTTTG TCTAA TTC TTGGA TTTTTTCCTGTGTTT TERM 6 2857 - 2871 + g 82 -5.8 -5.00884 | TAGAGAGAATTTGTT TTATAG AAT CTATAA TTTTTTGAGCGGAAT TERM 7 2913 - 2930 + H 84 -4.3 -5.54403 | ACAAAAATCTCGATG TTTTATT TAAT AATAAAA TTTTTCTTGTTTTTT TERM 8 3816 - 3840 + G 75 -2.1 -5.3689 | overlap 3834 TGCGTCTTCTAAAGA TCCTTATGTAT TCG ATCCGAAAGGA TTTTCTTTTGTTTCT TERM 9 3834 - 3845 + G 71 -3 -5.01553 | overlap 3816 TTATGTATTCGATCC GAAA GGAT TTTC TTTTGTTTCTCAATT TERM 10 4332 - 4345 + G 79 -3.1 -5.39681 | overlap 4323 GATTGAGCAGCCTTT GCTTT ATCC AGAGC TTTTTGTTTGGTTAT TERM 11 4774 - 4744 - g 74 -4.1 -4.91852 | CGTATGAAAAACAAA CTACAATCTCT GGTAGGGAA AGAGATGGTAG AGAATGCTAAGGAAA TERM 12 5057 - 5040 - g 70 -5.7 -4.2679 | TAATCCGGATGAAAA GATTTTA TCAC TAAAATC TAAACTGGCCCAAGA greA 3010 - 5157 + | transcript cleavage factor/unknown domain fusion protein aspC 5345 - 6547 + | aromatic amino acid aminotransferase TERM 13 6681 - 6699 + GT 84 -11 -3.61715 | CTTCCATTTCGGCAA GGGTCTGA TTC TCAGGCCC TTGTTGAAGAAACTC CTL0006 6522 - 7532 + | exported protein recB 10628 - 7548 - | exodeoxyribonuclease V beta chain TERM 14 9493 - 9510 + g 74 -9.9 -3.10464 | overlap 9495 TTAGAAAAGATCTGC CACTGAC GTTT GTCAGTG TCTTGGAATTCATCG TERM 15 10317 - 10331 + g 73 -3.6 -4.99043 | ATTACGGATCTTCAT GTAAAG CTG TTTTAC TTTTGTTTCTGAGGA TERM 16 10591 - 10581 - G 74 -4 -5.06816 | AGCTTCTAAGAAAAA TTTC CCA GAAA CAGAAGCTGTTGGTG recC 13650 - 10630 - | exodeoxyribonuclease V gamma chain TERM 17 12392 - 12407 + g 70 -2.5 -4.96762 | TAGTGCGTAAGTTTA TGGGT AAGGAA GCCCA TTTTTGTAGTCTCTA TERM 18 13740 - 13756 + G 80 -3.7 -5.37865 | TATAAATGACAATCT CTATAAG TTT CTTTTAG TTTTTTCCTTGTTAG CTL0009 13663 - 15342 + | putative membrane efflux protein CTL0010 16177 - 15362 - | hypothetical protein TERM 19 15687 - 15665 - G 71 -2.1 -5.19819 | gap 1, overlap 15671 AAATAAAACGAAAAA CAGAAAGAAA TGCG TTTCTC-CTG CTGATCGGAACAGGG TERM 20 16475 - 16488 + H 71 -6.7 -4.15788 | opp_overlap 16475, overlap 16477 16478 GTCTTTCACCTATAA GCTCT TTTG AGAGC TTTCTTGGAAAGCTT TERM 21 17030 - 17009 - H 75 -3.1 -5.19328 | opp_overlap 17009 17010, overlap 17010 ATCGTATAAGAAAAA GTTTTTTTT TTTA AAAAAAAGC TTTTGTGCGAGAGAC TERM 22 19525 - 19514 - g 74 -4.4 -4.91873 | TATATTAAGGAAAAA GGAT TGCA ATCC CCTCAAAATAAAAAA TERM 23 19631 - 19616 - g 73 -2.6 -5.08824 | GCGCTATCTAAAAAA TTAAGC GCGC ACTTAA TCAAGGAAGAGTAGG topA 17072 - 19645 + | DNA topoisomerase I/SWI domain fusion protein CTL0012 20679 - 19675 - | putative oxidoreductase CTL0013 20954 - 20658 - | integral membrane protein TERM 24 21452 - 21435 - g 73 -9.9 -2.93335 | opp_overlap 21434, overlap 21434 TGTTACAAAGACAAT CTGTTGC GTTA GCAACAG CTCTCTTGGAGGAGA CTL0014 21059 - 22438 + | hypothetical protein TERM 25 22634 - 22614 - g 88 -11.1 -3.83844 | GGTAGCAATCAAGAA TGCGCGGCT GAA AGCAGCGCA TAAACAAGCGAGTTT CTL0015 22438 - 23016 + | hypothetical protein TERM 26 23602 - 23620 + G 80 -6.1 -4.82901 | opp_overlap 23602 23616 TCACCGAAGAAGGAA GTTTGTT AAAGA AACAAAC TTTTTGTAAAGGGCA TERM 27 23975 - 23965 - g 74 -4 -4.93318 | GAGAAGGTAGAAAAA TGTT ATT AACA TGGTCCCAAGGCATT CTL0016 23007 - 24281 + | hypothetical protein TERM 28 24367 - 24390 + G 70 -3.8 -4.77165 | opp_overlap 24367 24371 24372 TGTCCAGCGCAGAGA TGAAGCAGCT CGTG AGCTGATGCA TTTTGTTATGCAGAC CTL0017 24284 - 24820 + | hypothetical protein TERM 29 25043 - 25013 - f 76 -9.1 -3.74872 | opp_overlap 25020 25036, overlap 25015 25018 ACTGACGCCACGAAA TATAAGAGGTCGC AGATG GCAACCTCTTAAA GTAGAGTCTTCTAGA TERM 30 25041 - 25015 - f 85 -11.7 -3.4582 | opp_overlap 25020 25036, overlap 25013 25018 TGACGCCACGAAATA TAAGAGGTCGC AGATG GCAACCTCTTA AAGTAGAGTCTTCTA TERM 31 25038 - 25018 - f 76 -9 -3.86252 | opp_overlap 25020 25036, overlap 25015 25013 CGCCACGAAATATAA GAGGTCGC AGATG GCAACCTC TTAAAGTAGAGTCTT recA 25080 - 26138 + | recombinase A TERM 32 26160 - 26199 + F 100 -12.5 -4.77173 | gap 1, opp_overlap 26168 26174, overlap 26164 26165 TATTCCCTATCGATT CTAATCAAGGAAAAGAAG TTTTT CTTCTTTTCCTTGGT-AG TTTCTTTTCTCCCCC TERM 33 26164 - 26196 + F 100 -14.4 -3.28878 | opp_overlap 26168 26174, overlap 26160 26165 CCCTATCGATTCTAA TCAAGGAAAAGAAG TTTTT CTTCTTTTCCTTGG TAGTTTCTTTTCTCC TERM 34 26165 - 26195 + F 100 -15.7 -2.56242 | opp_overlap 26168 26174, overlap 26164 26160 CCTATCGATTCTAAT CAAGGAAAAGAAG TTTTT CTTCTTTTCCTTG GTAGTTTCTTTTCTC TERM 35 26192 - 26168 - f 84 -11.6 -3.35992 | opp_overlap 26165 26164 26160, overlap 26174 ATCGATTCTAATCAA GGAAAAGAAG TTTTT CTTCTTTTCC TTGGTAGTTTCTTTT TERM 36 26818 - 26832 + G 80 -2.8 -5.42198 | overlap 26809 TAGAAAGGGTATCTG GATCAG AAG CTCATC TTTTATTTTTTAAAG TERM 37 27219 - 27245 + G 93 -8.9 -4.56597 | gap 1, opp_overlap 27219 CAGAAGCAAATGAAA GGTTTTG-ATGC GGGA GCATACAAAACC TTTTTCCCAGAAAGC TERM 38 27245 - 27219 - g 83 -8.9 -4.16205 | gap 1, opp_overlap 27219 CAGAAGCAAATGAAA GGTTTTG-ATGC GGGA GCATACAAAACC TTTTTCCCAGAAAGC TERM 39 27969 - 28002 + G 73 -2.5 -5.24129 | gap 1 CTAGCTAGCGATGCC GAAATTGCGAAT-TGT TTA GCAGATGCGCAATATC TTTTTTCTAAAGGCG TERM 40 28157 - 28119 - g 70 -5.5 -4.50988 | gap 1, opp_overlap 28124 28151, overlap 28121 28123 28124 28148 GTAGAGCAAAAAGAA TACACGGAAGCTTTGGAA GTAT TTCAAAAGCTTCC-TTTA GGGGAGGATGCTTGG TERM 41 28154 - 28123 - g 73 -8.8 -3.48772 | opp_overlap 28124 28151, overlap 28121 28119 28124 28148 AGCAAAAAGAATACA CGGAAGCTTTGGAA GTAT TTCAAAAGCTTCCT TTAGGGGAGGATGCT TERM 42 28153 - 28124 - g 88 -12.3 -2.67636 | opp_overlap 28124 28151, overlap 28123 28121 28119 28148 GCAAAAAGAATACAC GGAAGCTTTGGAA GTAT TTCAAAAGCTTCC TTTAGGGGAGGATGC TERM 43 28124 - 28153 + G 100 -12.3 -3.53444 | opp_overlap 28124 28123 28121 28119 28148, overlap 28151 GCAAAAAGAATACAC GGAAGCTTTGGAA GTAT TTCAAAAGCTTCC TTTAGGGGAGGATGC CTL0019 26424 - 28250 + | putative exported lipoprotein TERM 44 28674 - 28647 - g 72 -9.2 -3.0782 | overlap 28667 28672 TAATTTTTGAAGAGA TTGCTCTGCTCT CAGA AGAGCAGAACCA GGTACTGAAAACTGT TERM 45 29327 - 29343 + G 73 -2.9 -5.09426 | overlap 29329 GCTTTGACTCCGATG CGCCAAG GAC TTTGGGG TTTTTTGCAGTTGAA TERM 46 29503 - 29535 + G 83 -9.2 -3.95324 | opp_overlap 29503, overlap 29505 29512 ATTGCGTTTCATGAA TGGGGAGATTCTGC ATCAA GCAGATTTTCCCTA TTATTCTTACAACTA TERM 47 29505 - 29533 + G 76 -9.6 -3.56318 | opp_overlap 29503, overlap 29503 29512 TGCGTTTCATGAATG GGGAGATTCTGC ATCAA GCAGATTTTCCC TATTATTCTTACAAC TERM 48 29512 - 29526 + G 70 -5.7 -4.32048 | opp_overlap 29503, overlap 29505 29503 CATGAATGGGGAGAT TCTGC ATCAA GCAGA TTTTCCCTATTATTC recD 28247 - 29737 + | exodeoxyribonuclease V alpha chain CTL0021 29803 - 29982 + | hypothetical protein TERM 49 30033 - 30055 + T 100 -15.6 -3.28712 | opp_overlap 30033 GGTTTCTATTATTAA GACCTGGGCG TTG TGCCCAGGTC TTGTGAAAAACGGGA TERM 50 30055 - 30033 - T 100 -14.9 -3.21099 | opp_overlap 30033 GGTTTCTATTATTAA GACCTGGGC GTTGT GCCCAGGTC TTGTGAAAAACGGGA CTL0022 30802 - 30083 - | ABC transporter ATP-binding protein CTL0023 31299 - 30811 - | hypothetical protein kdsA 32105 - 31296 - | 2-dehydro-3-deoxyphosphooctonate aldolase CTL0025 32591 - 32884 + | hypothetical protein CTL0026 32884 - 33201 + | hypothetical protein TERM 51 33505 - 33524 + G 70 -7.9 -3.72576 | opp_overlap 33503 33508 33511, overlap 33508 GAAGTGGAATTGATA GAAGAGG AAGAAC CCTCTTC TTTAATCCCGGAAGA TERM 52 34069 - 34092 + G 93 -12.4 -3.01188 | overlap 34053 34052 GGCACACCGATTCTC GGAGATCCCG TTTA CGGGATCCCC TCTATAAATTTTCGT sfhB 33283 - 34290 + | ribosomal large subunit pseudouridine synthase D CTL0028 34390 - 34626 + | hypothetical protein TERM 53 34643 - 34620 - T 74 -9.6 -3.14454 | opp_overlap 34620, overlap 34618 AGAAATTATGGAAGA GCGGTAAACG TATA CGTTTACAGC TTTTTGAGTCATTGT TERM 54 34620 - 34643 + T 90 -9.6 -4.71382 | opp_overlap 34620 34618 AGAAATTATGGAAGA GCGGTAAACG TATA CGTTTACAGC TTTTTGAGTCATTGT gyrA2 36237 - 34765 - | DNA topoisomerase IV subunit A TERM 55 36052 - 36026 - G 70 -9.3 -2.78935 | AGAGCTTCCACGATA GGCGCATCACC ATGCG GGTGCAGCGCC ATCGTACGTCCTGCG TERM 56 36135 - 36113 - G 72 -10 -2.82142 | overlap 36112 36123 TCCATACGGAATAAG GTCCAAAGAA GCC TTCTTTGAAC AGGCTTGAGGCCATC gyrB 38069 - 36252 - | DNA topoisomerase IV subunit B TERM 57 36625 - 36610 - G 72 -6.2 -4.24342 | GTTTTTAGGAAGAAA GTAATC ATAA GATTAC GAATATGCATACCAT TERM 58 37034 - 37059 + g 70 -5.5 -4.56597 | gap 1, opp_overlap 37057 GTTTGATTTTCTCTT GGATCCGTTCCG CGC TGGAA-GGATTC TTTTTCAAAGAAGAG TERM 59 38838 - 38867 + G 100 -12.3 -4.78848 | opp_overlap 38834 38833 38844, overlap 38840 CTATTTACAAGCTGC TAGAGAGCAAAAG CTTT CTTTTGCTCTCCA TTTTCTCTTTCAAAA TERM 60 38840 - 38865 + G 100 -14.9 -2.67228 | opp_overlap 38834 38833 38844, overlap 38838 ATTTACAAGCTGCTA GAGAGCAAAAG CTTT CTTTTGCTCTC CATTTTCTCTTTCAA hemA 38449 - 39456 + | glutamyl-tRNA reductase TERM 61 39953 - 39941 - f 83 -7.7 -4.61873 | CTTTAGAAATCAAAA GAACG AGT CGTTC GTGCCCGATTTTTTT sycE 40168 - 40569 + | Type III secretion system chaperone TERM 62 42711 - 42727 + G 77 -10.9 -2.78211 | overlap 42710 GAACGTTCATGTGTC CTTCACC AAT GGTGAAG CTGTTTTGACAGGAT TERM 63 42805 - 42790 - g 70 -7.6 -3.61517 | ACGGTTGTGCAAGAA CTGCAA GATA TTGCAG GGATTCGTGCGGTGA CTL0033 40573 - 43062 + | phosphopeptide binding protein ( to be a TTSS protein) CTL0034 43106 - 43357 + | hypothetical protein CTL0035 43384 - 43635 + | hypothetical protein CTL0036 43654 - 44103 + | hypothetical protein TERM 64 44423 - 44400 - g 77 -6.1 -4.58395 | gap 1, overlap 44401 44402 TCCATTTGTTAAAAA GTCGTTTGTG GGATG CACAAACG-C AGATGCAAATGCAAG TERM 65 44422 - 44402 - g 71 -9.8 -2.60508 | overlap 44400 44401 CATTTGTTAAAAAGT CGTTTGTG GGATG CACAAACG CAGATGCAAATGCAA CTL0037 44123 - 44794 + | hypothetical protein sctN 44796 - 46124 + | type III secretion system ATPase TERM 66 46460 - 46443 - g 74 -4.1 -5.04733 | overlap 46445 TAAGCAGAAAGAAAA TGTGCTG GCAG CAGCAAA GGAGCTGGAAAGGGC CTL0039 46147 - 46653 + | hypothetical protein CTL0040 46657 - 47508 + | hypothetical protein TERM 67 48083 - 48104 + G 70 -9.5 -2.76696 | gap 1, opp_overlap 48083, overlap 48082 TCTTAGTGCCTGAAA CTACAG-CGC AGA GCGCCTGTAG ATTCTTAGAAGAGAA TERM 68 48104 - 48083 - g 76 -9.5 -3.54424 | gap 1, opp_overlap 48083 48082 TCTTAGTGCCTGAAA CTACAG-CGC AGA GCGCCTGTAG ATTCTTAGAAGAGAA TERM 69 48214 - 48233 + G 81 -4.3 -5.27476 | gap 1, overlap 48214 48216 TCAGAAGAAGATTGG C-ACCAGG TTGTT CCTGGTAG TTTTATTTTGTTAGA sctQ 47518 - 48639 + | type III secretion system protein TERM 70 49731 - 49706 - g 93 -12 -3.59262 | GCTTACATCTGGAAA CGTAGCAGAA TTTTGG TTCTGCTACG CTCCAGGAAACTGTA pkn5 48774 - 50246 + | putative serine/threonine-protein kinase (TTSS effector protein) TERM 71 50468 - 50451 - g 70 -7.1 -3.90048 | overlap 50449 CTTGCCCTAAAAATA TTGCTAA GAAT TTAGCAA AGAAAAGCTCTCCAG TERM 72 50880 - 50859 - g 73 -5.2 -4.73094 | overlap 50854 50860 AAGAGCAACAGAAAA CCATTTCC AATCCA GGAAATGA CCAGACTCTTCCTGG TERM 73 52000 - 51971 - g 77 -10.8 -2.75844 | opp_overlap 51974 51982, overlap 51970 GTTGTCATTGGAAAT CAAGCTAACGTC GATAAG GTCGTTAGCTTG CTAAATGGGTTGGAC CTL0043 50243 - 53008 + | Type III secretion structural protein (outer membrane ring) TERM 74 53085 - 53127 + T 91 -9.3 -4.87786 | gap 1 GTACACAGGGGGGAA GTCAAGATGGACTGGAGTTA GCCG TATCTCCGGTTC-TCTTGGC TTTTTATGGAGTTAG aspC 54392 - 53322 - | ATP:guanido phosphotransferase CTL0045 54903 - 54382 - | hypothetical protein TERM 75 55177 - 55200 + r 83 -3.8 -5.61596 | CGATGGGGCCAGGAC GGGTCTAATG TTAT CACTAAACCC TTTTTTTCTGCAACT rrf 55813 - 55274 - | ribosome recycling factor pyrH 56547 - 55810 - | uridylate kinase TERM 76 55898 - 55880 - G 75 -8.2 -3.90744 | opp_overlap 55880 55878 55868 GCCTCCTCTAAAGAA TGTCTAGC AAA GCTAAACA TCTTTATGGGGATTC tsf 57408 - 56560 - | elongation factor Ts TERM 77 56637 - 56661 + g 70 -7.9 -3.737 | opp_overlap 56637 56639, overlap 56659 CAGCTCTATCAATCA GACCTTGAATT GTG ACTTCAGGGTC TTTAATGAAGGCTTG TERM 78 56692 - 56671 - G 74 -9.5 -3.33815 | opp_overlap 56659 56671 56690, overlap 56690 AGGGTCTTTAATGAA GGCTTGTTC TAAT AAACAAGCC TCTTGGAAAAAGGCT TERM 79 56706 - 56690 - G 73 -7.3 -4.20367 | opp_overlap 56671 56690, overlap 56671 TGTTCTAATAAACAA GCCTCTT GGA AAAAGGC TTTAAATTTCCCTTG rpsB 58253 - 57405 - | 30S ribosomal protein S2 TERM 80 57772 - 57807 + g 70 -7.6 -3.64283 | gap 1, opp_overlap 57765 57783 ATTACAATCAGAAGC CCTGGGAGAGAGTTCAT ATG ACGAACGC-CTTCCAGG TTGTTGAGCAATTTG TERM 81 58536 - 58524 - R 75 -3.5 -5.3321 | overlap 58518 AAGTAAGAACAAAAA TTTTT GCA AAAAA AACTGGACCCGACCG TERM 82 58564 - 58539 - R 100 -13.3 -5.75342 | TTTTTGCAAAAAAAA CTGGACCCGAC CGAA GTCGAGCCCAG AAACACGGATAGTGT ompA 59821 - 58637 - | major outer membrane protein TERM 83 60163 - 60143 - H 78 -3.3 -5.40072 | overlap 60145 TTTTTGCGAAAAAAA TCGCTCT GAAACCG AGAGCAA AAGCCATGTTGGCAA TERM 84 60176 - 60166 - H 75 -6.8 -4.37534 | opp_overlap 60165 60168 AAACCGAGAGCAAAA GCCA TGT TGGC AATATGTTGATTGTT TERM 85 62098 - 62052 - g 82 -8.1 -4.51097 | opp_overlap 62050 62048 62052 62054, overlap 62053 62054 CCAACTACGATAAAA TTCTATTTCTGGATCTATTGC GTACG GCAGTAGATCCAGAAAAAGTC TCTATCTCTTTATTA TERM 86 62052 - 62098 + G 77 -10.3 -3.19051 | opp_overlap 62052 62053 62054, overlap 62050 62048 62054 CCAACTACGATAAAA TTCTATTTCTGGATCTATTGC GTACG GCAGTAGATCCAGAAAAAGTC TCTATCTCTTTATTA TERM 87 62097 - 62053 - g 86 -11.6 -3.29935 | opp_overlap 62052 62050 62048 62054, overlap 62052 62054 CAACTACGATAAAAT TCTATTTCTGGATCTATTGC GTACG GCAGTAGATCCAGAAAAAGT CTCTATCTCTTTATT TERM 88 62054 - 62096 + G 100 -17.3 -3.13685 | opp_overlap 62053 62052 62054, overlap 62052 62050 62048 AACTACGATAAAATT CTATTTCTGGATCTATTGC GTACG GCAGTAGATCCAGAAAAAG TCTCTATCTCTTTAT TERM 89 62096 - 62054 - g 100 -15.1 -2.57238 | opp_overlap 62054 62052 62050 62048, overlap 62053 62052 AACTACGATAAAATT CTATTTCTGGATCTATTGC GTACG GCAGTAGATCCAGAAAAAG TCTCTATCTCTTTAT TERM 90 63116 - 63153 + G 83 -11.4 -3.02144 | opp_overlap 63107, overlap 63119 GGAAGAGTGCCTATC GATGTCGCATATAACC GTTCGG GGTTATATGCGACTGC TATTGGGCAACATAC TERM 91 63119 - 63150 + G 100 -16.1 -2.73875 | opp_overlap 63107, overlap 63116 AGAGTGCCTATCGAT GTCGCATATAACC GTTCGG GGTTATATGCGAC TGCTATTGGGCAACA pbpB 60428 - 63670 + | penicillin-binding protein TERM 92 63992 - 64037 + G 70 -9.2 -2.88579 | gap 1, opp_overlap 64001 64002, overlap 63986 64000 64001 TGTTATGGCGTGGCT TTAGATAAAG-CCGATCGCTT AGAAG AAGCGATCGGGCATTATCAAG TGTATGCAGAGTTAC TERM 93 64001 - 64028 + G 76 -10.7 -2.61239 | gap 1, opp_overlap 64001 64002, overlap 63986 64000 63992 GTGGCTTTAGATAAA G-CCGATCGCTT AGAAG AAGCGATCGGGC ATTATCAAGTGTATG TERM 94 64027 - 64001 - g 90 -10.9 -4.03234 | opp_overlap 63986 64000 63992 64001, overlap 64002 GTGGCTTTAGATAAA GCCGATCGCTT AGAAG AAGCGATCGGG CATTATCAAGTGTAT TERM 95 64026 - 64002 - g 100 -14.4 -3.01726 | opp_overlap 63986 64001 64000 63992, overlap 64001 TGGCTTTAGATAAAG CCGATCGCTT AGAAG AAGCGATCGG GCATTATCAAGTGTA TERM 96 64471 - 64482 + G 82 -5.8 -4.98522 | opp_overlap 64469 64471 GTTAAATGCAGAAGA TGCG GATG CGCA TTTTTATATAGGATT CTL0052 63734 - 64741 + | TPR repeat-containing protein TERM 97 64872 - 64888 + F 79 -8.7 -3.94746 | AAGTTTTTTTCTTAA GGGCTGT TTG ACAGTCC TTTCCTTGGGTCTAG TERM 98 64896 - 64930 + F 79 -7.9 -4.26495 | overlap 64898 64905 GACAGTCCTTTCCTT GGGTCTAGGGAGAGA CATCC TCTTTCCCTAGGCTG TCTTTCTTTTTTTTC TERM 99 64898 - 64928 + F 95 -12.7 -3.65523 | overlap 64896 64905 CAGTCCTTTCCTTGG GTCTAGGGAGAGA CATCC TCTTTCCCTAGGC TGTCTTTCTTTTTTT TERM 100 64905 - 64936 + F 93 -5.2 -5.75342 | overlap 64898 64896 TTCCTTGGGTCTAGG GAGAGACATCCT CTTTCCCT AGGCTGTCTTTC TTTTTTTTCAAAAAG TERM 101 65422 - 65410 - g 75 -3.3 -5.14477 | opp_overlap 65410 GAGACATTTAAAAAA TTGGG CAT CCCTA TTGATGAGCAAAAAA CTL0053 65083 - 66534 + | cysteine desulfurase activator complex subunit SufB CTL0054 66537 - 67304 + | ABC transporter ATP-binding protein TERM 102 67584 - 67600 + G 81 -4.3 -5.40072 | overlap 67585 67587 ATCATCGTGGCCCCT TTACGCG AAG CGCGTGC TTTTTTTCAGAAGCA TERM 103 67585 - 67599 + G 72 -7.8 -3.83561 | overlap 67584 67587 TCATCGTGGCCCCTT TACGCG AAG CGCGTG CTTTTTTTCAGAAGC TERM 104 67587 - 67597 + G 71 -8.2 -3.49966 | overlap 67585 67584 ATCGTGGCCCCTTTA CGCG AAG CGCG TGCTTTTTTTCAGAA TERM 105 67897 - 67867 - g 87 -8.3 -4.56775 | opp_overlap 67868, overlap 67868 ATCTTTTTGGAAAAA CGCTCTGTTTCCT AGGCG AGGAAGCAGAGCT TGTTTTGACCATGAA TERM 106 67868 - 67896 + G 100 -14 -4.18506 | opp_overlap 67868 67867 TCTTTTTGGAAAAAC GCTCTGTTTCCT AGGCG AGGAAGCAGAGC TTGTTTTGACCATGA TERM 107 67896 - 67868 - g 89 -11.8 -3.33744 | opp_overlap 67868, overlap 67867 TCTTTTTGGAAAAAC GCTCTGTTTCCT AGGCG AGGAAGCAGAGC TTGTTTTGACCATGA TERM 108 68412 - 68426 + G 75 -5.7 -4.67234 | opp_overlap 68412 68411 ATAGAAGCCAAACAG GCTCT ACAAA AGAGC TTTTTGACGTTAGAT CTL0055 67308 - 68495 + | hypothetical protein TERM 109 69199 - 69227 + G 100 -15.4 -2.84192 | overlap 69195 69225 AAAGAACTTTTGGAA TCGCTTCCTCCT GTTGA AGGAGGAGGCGA TATGGTGATCGTATA sufS 68488 - 69693 + | cysteine desulfurase parB 69829 - 70674 + | putative chromosome partitioning protein dppF 71496 - 70666 - | ABC transport protein, ATPase component TERM 110 70753 - 70728 - G 73 -10.5 -2.53911 | GTAATTGTGAATGGA GCAGCATTCGT GTGT AGGAATGCTGC GGATTACAAAAGATT dppD 72454 - 71489 - | ABC transport protein, ATPase component TERM 111 72283 - 72241 - G 100 -12.8 -4.72272 | overlap 72243 TCTCTTTATTAAAAA GAGCCTCTCCTGAAAGAGAA AAG CTCTCTTCCGGGAGAAGCTG CATAAGAGATTGTGC TERM 112 72281 - 72243 - G 100 -15.4 -3.98256 | overlap 72241 TCTTTATTAAAAAGA GCCTCTCCTGAAAGAGAA AAG CTCTCTTCCGGGAGAAGC TGCATAAGAGATTGT TERM 113 72525 - 72514 - H 80 -3 -5.63504 | opp_overlap 72514 AATCTTAGAAAAAAA CAAA AAAT TTTG GTTCTTAGTACATTC CTL0060 72615 - 73289 + | hypothetical protein TERM 114 73812 - 73828 + G 100 -10.1 -4.83615 | ATCCCGTCTCTGCTA TGGTGCG TAT CGCGCCA TTTTTATCGGCGATC TERM 115 73994 - 74006 + G 70 -7.7 -3.72027 | TTTAAACTTGCGATT CTTCC TCA GGAAG TTCTTCCTGGAACAT CTL0061 73292 - 74572 + | low-affinity inorganic phosphate transporter TERM 116 75005 - 75029 + G 100 -11.4 -3.99324 | opp_overlap 75005, overlap 74992 GATTGTATAGGAGAA GTCGCGCGAC AGGCG GTCGCGCAAC TTTCTCCTGGTAGAG TERM 117 75029 - 75005 - g 100 -13.6 -3.47078 | opp_overlap 74992 75005 GATTGTATAGGAGAA GTCGCGCGAC AGGCG GTCGCGCAAC TTTCTCCTGGTAGAG pgk 74711 - 75922 + | phosphoglycerate kinase TERM 118 75955 - 75971 + F 100 -7.2 -6.23545 | opp_overlap 75955 CTTTGTTAATGAAAA GCCCTG TTTAT CGGGGC TTTTTTTTGTTTAAA CTL0063 76182 - 77150 + | hypothetical protein TERM 119 77773 - 77791 + G 75 -8.8 -3.66256 | GGTGGGTTTGCTTTT GCGTATGG CTA CCTTACGC TCTTTTGAACATGTC TERM 120 78045 - 78035 - g 75 -5.4 -4.82901 | GTTCGTTTAGAAAAA GAAG ACC CTTC TTCAGACTATTCTCA TERM 121 78335 - 78345 + G 78 -5.4 -5.05606 | opp_overlap 78332, overlap 78332 CGTATGATCGAAGGT TTGG TAA CCAA TTTCTTTTTCTTACC CTL0064 77201 - 78397 + | hypothetical protein TERM 122 78877 - 78897 + G 79 -8.3 -4.08767 | opp_overlap 78876, overlap 78879 GGCCTGTTAAGAAGG TCGAATCGG TTG CCGATTCTA TTTTACAGAGATCAA TERM 123 78879 - 78895 + G 84 -10.9 -3.6422 | opp_overlap 78876, overlap 78877 CCTGTTAAGAAGGTC GAATCGG TTG CCGATTC TATTTTACAGAGATC TERM 124 78924 - 78937 + G 71 -6.7 -4.12456 | TCAAAAGGAAATTTT TCGTC TTGG GACGA TTTTACACATGATGT TERM 125 79091 - 79108 + G 89 -7.1 -5.00616 | opp_overlap 79099 79100 GTACCTCTCTGTAAG TTTCGAA ATTC TTCGAAA TTTTTTAGAAGAGAA TERM 126 79379 - 79414 + G 73 -8.4 -3.64822 | gap 1, opp_overlap 79383, overlap 79380 79382 79383 GCAAGCATTTTTAGC AGAA-GTTGTGTTGCAC GTG GTGCAACACCACATTCA TTTAAATGCAAAGGT TERM 127 79380 - 79413 + G 83 -11.9 -2.78679 | gap 1, opp_overlap 79383, overlap 79379 79382 79383 CAAGCATTTTTAGCA GAA-GTTGTGTTGCAC GTG GTGCAACACCACATTC ATTTAAATGCAAAGG TERM 128 79382 - 79410 + G 80 -10.3 -3.54408 | opp_overlap 79383, overlap 79380 79379 79383 AGCATTTTTAGCAGA AGTTGTGTTGCAC GTG GTGCAACACCACA TTCATTTAAATGCAA TERM 129 79383 - 79409 + G 95 -13.8 -2.72324 | opp_overlap 79383, overlap 79382 79380 79379 GCATTTTTAGCAGAA GTTGTGTTGCAC GTG GTGCAACACCAC ATTCATTTAAATGCA TERM 130 79409 - 79383 - g 100 -13.8 -3.41051 | opp_overlap 79383 79382 79380 79379 GCATTTTTAGCAGAA GTTGTGTTGCAC GTG GTGCAACACCAC ATTCATTTAAATGCA TERM 131 79628 - 79612 - g 76 -9.5 -3.53012 | CGCCTTTTTGGCAAA TGATTCC CTC GGAATCA GGAGATGGAACTTTC CTL0065 78483 - 79661 + | hypothetical protein nth 80293 - 79658 - | endonuclease III TERM 132 79925 - 79909 - G 78 -2.3 -5.4477 | AAATGCTTAAAAAAA CAGAA GCTGTTT TTCTG CCTACTCCTGGAAGA trmE 81634 - 80300 - | tRNA modification GTPase TrmE TERM 133 82166 - 82176 + G 90 -4 -5.60993 | CTGCACGACTACGCG TCAT TTA ATGA TTTTTTTGTACGAAA psdD 81902 - 82807 + | phosphatidylserine decarboxylase TERM 134 83068 - 83055 - g 77 -4.5 -5.03314 | CCGATCCTGAAAAAA CGTCA ATAT CGACG TAAATATTTATTCGA TERM 135 83207 - 83236 + G 81 -5.1 -5.23765 | gap 2 ACATAAGGCTTTCCG GCATG-GC-GCCT ATAAAG AGGCTGCACATGC TTTTTCTCTTCTTTC TERM 136 83534 - 83547 + G 71 -6.7 -4.09685 | TGTCGATGCTGGGAT GCTCT TTAG AGAGC TTTTAGGGGATCCGG CTL0069 82872 - 84197 + | hypothetical protein TERM 137 84184 - 84199 + F 71 -3.2 -5.12474 | overlap 84185 TAGAGGTTTCTTTAC TGCTAG CTGC CTAGCC TTTTTCTCTCTTGTA TERM 138 84238 - 84258 + F 89 -3.9 -5.70761 | CAATATAAGATCTTA GCCCTCG TATTGCT CGAGTGC TTTTTGTTTTCTTTT TERM 139 85495 - 85514 + G 72 -9.4 -3.2059 | opp_overlap 85491, overlap 85493 85491 85497 ATAAAGAGGAATGTC TAGAGAAG CTCT CTTCTCTA TATATTGTAGTCGAT TERM 140 85740 - 85725 - g 71 -3.2 -4.92385 | overlap 85727 GATACGCAAAGAAAA GCCC GAGCTCAT GGGC TACGGCAGCTGTTAA TERM 141 86187 - 86163 - g 71 -10.1 -2.71924 | overlap 86162 CATCGTTCCGGAAAG CCGATTCTG ATCGGGA CAGAATCGG TGGAGGTGTCTGAGA secA 84456 - 87365 + | preprotein translocase subunit SecA TERM 142 87382 - 87407 + T 100 -13.4 -4.78848 | opp_overlap 87379 87382 AGGCTTGTCAAACTA GGCAATCTCC TTAATT GGAGATTGCC TTTTCTATTTAGAGA TERM 143 87407 - 87382 - T 95 -13.4 -2.90615 | opp_overlap 87382, overlap 87379 AGGCTTGTCAAACTA GGCAATCTCC TTAATT GGAGATTGCC TTTTCTATTTAGAGA CTL0071 87986 - 87459 - | hypothetical protein TERM 144 88038 - 88050 + r 78 -3.5 -5.43866 | overlap 88023 88022 TTTTATTATTTCTAA TAAAA GAT TTTTA TTTTTTTACAAATTA engA 89535 - 88063 - | GTP-binding protein EngA TERM 145 89310 - 89280 - G 89 -11.3 -3.43492 | gap 2, opp_overlap 89274, overlap 89283 89289 GGATATCTACTACAA GCAGCAGAACAGAGG CTT CCTCTG--CTGCTGC TAAAGCTTGTTGATG TERM 146 89310 - 89283 - G 81 -11.4 -2.86747 | gap 1, opp_overlap 89274, overlap 89280 89289 TATCTACTACAAGCA GCAG-AACAGAGG CTT CCTCTGCTGCTGC TAAAGCTTGTTGATG TERM 147 89303 - 89289 - G 78 -10 -3.48684 | opp_overlap 89274, overlap 89280 89283 CTACAAGCAGCAGAA CAGAGG CTT CCTCTG CTGCTGCTAAAGCTT pcnB 90883 - 89651 - | polyA polymerase TERM 148 90066 - 90076 + g 71 -3.2 -4.96646 | overlap 90060 CGTAAGCGAGAGAAG GCTT CTA GAGC TTTTTCCTTGTCTAC TERM 149 90909 - 90939 + r 77 -6.2 -4.84146 | opp_overlap 90906 90902, overlap 90906 AAAGTTAAGCAATCG CCTCTGGTGATT TCTGAAT AATGACCGGAGG TTTATTTTGTGTGAT clpX 92157 - 90898 - | ATP-dependent protease ATP-binding subunit clpP 92778 - 92167 - | ATP-dependent Clp protease proteolytic subunit tig 94273 - 92945 - | trigger factor TERM 150 95962 - 95981 + G 70 -2.8 -4.98531 | gap 1, opp_overlap 95967, overlap 95966 TTAGCTATTTGGATG GAGAACTCG AGG CGAGA-CTC TTTTTCCTTTACGAC CTL0077 94632 - 98123 + | putative helicase TERM 151 98631 - 98610 - g 74 -10.1 -3.09175 | AATTCTGATTGAAGA GCCTATGGC AGCA GCCATTGGC GTCGATCTCCCTGTA mreB 98128 - 99228 + | cell shape determining protein TERM 152 99532 - 99551 + G 93 -12.2 -3.62224 | opp_overlap 99532 GAGATCCTCAAGAGA TGCGTGCA GAGC TGCACGCA TTATTCCGAGGGTGT TERM 153 99551 - 99532 - g 86 -12.2 -3.08371 | opp_overlap 99532 GAGATCCTCAAGAGA TGCGTGCA GAGC TGCACGCA TTATTCCGAGGGTGT TERM 154 100148 - 100160 + G 74 -4.1 -5.0538 | opp_overlap 100148 ATTATACGCAGTGAA TCCAG AAT TTGGA TTTTTTGGAGTGGCA pckA 99225 - 101024 + | phosphoenolpyruvate carboxykinase TERM 155 101063 - 101119 + F 86 -9.2 -4.44245 | opp_overlap 101063, overlap 101075 101080 ATTCTAGTTTAGATA CTATTGTTTTTCTGTTTTAAAAAACA TTTTT TATTTTTAAAATTAGAAAAACAATAG TTTTCTGGATGATCT TERM 156 101119 - 101063 - f 73 -9.2 -2.89683 | opp_overlap 101063 101075 101080 ATTCTAGTTTAGATA CTATTGTTTTTCTGTTTTAAAAAACA TTTTT TATTTTTAAAATTAGAAAAACAATAG TTTTCTGGATGATCT TERM 157 101075 - 101088 + F 93 -3.9 -5.93252 | opp_overlap 101063, overlap 101063 101080 ATACTATTGTTTTTC TGTTT TAAA AAACA TTTTTTATTTTTAAA TERM 158 102150 - 102166 + G 72 -7.3 -3.91027 | opp_overlap 102150 AATGAACAGGTCAAA CTCAACG GTC TGTTGAG TTTAGTATATGCTTA CTL0080 101136 - 103439 + | hypothetical protein TERM 159 103463 - 103442 - f 79 -5.9 -4.92385 | opp_overlap 103429 103442, overlap 103437 TAGATTTAAATAAAA TCGTTTTAG AGGG CAAAAACGA TTATGAGAAACCATC CTL0081 103466 - 104638 + | hypothetical protein TERM 160 104691 - 104652 - T 100 -16.7 -3.88062 | opp_overlap 104643 AGACATGAGAGGAAA TCTTCTCTTAATCTCCC TTGAGG GGGAGGTTAAGAGAAGA GGGTTCGGGGGGTTA ompB 105726 - 104704 - | outer membrane protein B gpdA 106864 - 105860 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase CTL0084 108228 - 106861 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 161 107892 - 107878 - G 71 -9.2 -2.98881 | overlap 107873 107880 AGAGGAAACAGGATA GAGCCC TTT GGGCCC ATCAAATTTTAATCG CTL0085 108605 - 108240 - | hypothetical protein TERM 162 108437 - 108406 - G 75 -8.8 -3.5936 | opp_overlap 108399 TGTAAATGTTCTAAA TGTTGGTCATATTC ATGG GTATATGACCGACA TAGGAATTGTTTGTG TERM 163 108573 - 108560 - G 71 -6.7 -4.07885 | opp_overlap 108559 TACGTTTCTTGAAAA GCTCA ATAG TGAGC AGTTTAGACAGATCT fliI 109902 - 108598 - | type III secretion system ATPase CTL0087 110500 - 109976 - | hypothetical protein TERM 164 110242 - 110272 + g 74 -6.2 -4.56597 | overlap 110243 TTAGGAGAGCAAGTT CTTCTGTACAGGCA AGC TTTCTGTACAGAAA TTTTTCACAGACGAG TERM 165 110243 - 110271 + g 76 -9.7 -3.33744 | overlap 110242 TAGGAGAGCAAGTTC TTCTGTACAGGCA AGC TTTCTGTACAGAA ATTTTTCACAGACGA fliF 111509 - 110505 - | type III secretion system protein TERM 166 111620 - 111609 - R 73 -4.4 -4.86773 | opp_overlap 111609, overlap 111603 111613 111614 GAAAAGGATGAAAAA GAAG GCTT CTTC TTGTGAACAAGAAGA TERM 167 111659 - 111640 - R 75 -2.2 -5.3798 | gap 1, overlap 111643 111644 GAACAAGAAGAAAAA TTAG-CATC CGG GATGACCAA GAAGCTCAAAAGGGG TERM 168 111672 - 111693 + r 81 -7.3 -4.76963 | opp_overlap 111671 111660 111672 CAAGAAGCTCAAAAG GGGCTCT CAATTAAA AGAGCCC TTTTGTCTTCTGTAA CTL0089 112565 - 111783 - | hypothetical protein CTL0090 113716 - 112562 - | cysteine desulfurase TERM 169 113547 - 113566 + gr 89 -12.2 -3.32963 | overlap 113547 CCTGTGAGTTTGCGG GCAGAAGC TTCA GCTTCTGC TTGTAAAGTCAGAAT pgmA 114351 - 113671 - | phosphoglyceromutase TERM 170 114409 - 114420 + H 73 -3 -5.1925 | overlap 114398 CTTGTTTGCGGATTA TCTT TGCA AAGA TTTTTTACCTTATAA CTL0092 114646 - 115371 + | ribosomal large subunit pseudouridine synthase B TERM 171 115430 - 115399 - f 81 -10.3 -3.61398 | opp_overlap 115405, overlap 115383 115405 TTTGGTCCTTAAGAA CAAAAAGAGGGAG GTCTTT CTCCCTCTTTTTT TTGTTTAGAGGTACA TERM 172 115405 - 115424 + F 100 -10 -6.23545 | opp_overlap 115399 115405 CCTTAAGAACAAAAA GAGGGAGG TCTT TCTCCCTC TTTTTTTTGTTTAGA TERM 173 115424 - 115405 - f 100 -9.3 -5.29445 | opp_overlap 115405, overlap 115399 CCTTAAGAACAAAAA GAGGGAG GTCTTT CTCCCTC TTTTTTTTGTTTAGA TERM 174 115863 - 115876 + G 71 -3.1 -5.07652 | TGGAAGAACTACTTG CGTAT GAGA ATGCG TTTTCTTTTGAGGCC CTL0093 115490 - 116014 + | hypothetical protein birA 116041 - 116595 + | biotin--protein ligase CTL0095 117741 - 116602 - | cell cycle protein TERM 175 117712 - 117726 + g 80 -2.8 -5.57888 | overlap 117714 AAAGACCCACAAGTT CACTTG ACG CAAGTA TTTTGTTTTTTTCAT TERM 176 117759 - 117782 + r 82 -11 -3.27771 | overlap 117758 CAGGGATGTTATTCG CGTCCTTCCC GCAA GGGAAGGAAG TCTTGCTGTTCTGCC CTL0096 119812 - 117833 - | cation transporting ATPase TERM 177 118183 - 118208 + g 95 -12.7 -3.30124 | opp_overlap 118186, overlap 118186 TCTGCCGTGATTTAG CAAGCTCTTGA ATTT TCGAGAGCTTG TTATCAGGAGTCAGG TERM 178 118186 - 118205 + g 75 -8.6 -3.7941 | opp_overlap 118186, overlap 118183 GCCGTGATTTAGCAA GCTCTTGA ATTT TCGAGAGC TTGTTATCAGGAGTC TERM 179 119575 - 119562 - G 71 -9.5 -2.92936 | AAGGATTTAATGAGA GCGGG AGTT CCCGC TAAGAAAAAAGTAAG CTL0097 120582 - 119836 - | putative integral membrane protein TERM 180 120356 - 120336 - G 80 -4.8 -5.24531 | gap 1, overlap 120338 AGCTGGTATAAAAAA TC-CAACTG ATCC CAGTTGCGA ATAGGATTTTTCCAT serS 121905 - 120619 - | seryl-tRNA synthetase ribD 121947 - 123074 + | riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) TERM 181 123645 - 123679 + GF 71 -4.3 -4.77157 | gap 1, overlap 123647 123648 123652 CGAAGCTGCTATGGA TCTCATGCGGCTTGCA GGTA TGCA-GCCGTGTGGTA TTTTTGCTGAGTTAG TERM 182 123647 - 123677 + GF 72 -6.9 -3.9993 | gap 1, overlap 123645 123648 123652 AAGCTGCTATGGATC TCATGCGGCTTGCA GGTA TGCA-GCCGTGTGG TATTTTTGCTGAGTT ribA 123184 - 124458 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein ribH 124427 - 124900 + | riboflavin synthase subunit beta TERM 183 124946 - 124916 - T 91 -9.8 -4.84017 | opp_overlap 124922, overlap 124919 124922 AACGGTGTAGAAAAA GAAGAACGCCTGAT CAA ATCAGGCGTTTTTT TTGATTATAAATGGA TERM 184 124943 - 124919 - T 100 -11.5 -4.52873 | opp_overlap 124922, overlap 124916 124922 GGTGTAGAAAAAGAA GAACGCCTGAT CAA ATCAGGCGTTT TTTTTGATTATAAAT TERM 185 124940 - 124922 - T 100 -13.2 -4.36508 | opp_overlap 124922, overlap 124919 124916 GTAGAAAAAGAAGAA CGCCTGAT CAA ATCAGGCG TTTTTTTTGATTATA TERM 186 124922 - 124940 + T 100 -13.2 -5.98781 | opp_overlap 124919 124916 124922 GTAGAAAAAGAAGAA CGCCTGAT CAA ATCAGGCG TTTTTTTTGATTATA CTL0102 126297 - 124951 - | hypothetical protein TERM 187 125584 - 125568 - G 76 -7.9 -4.23758 | overlap 125570 AGTCCAGAGCTAAAA GAGCTCG TTG CGAGCGC CCAGCAGACAGAAGC TERM 188 125582 - 125570 - G 75 -9.1 -3.71913 | overlap 125568 TCCAGAGCTAAAAGA GCTCG TTG CGAGC GCCCAGCAGACAGAA TERM 189 126494 - 126507 + H 83 -5.3 -5.4505 | GAGATTCTACCGGCT TCATG CTAA CATGA TTTTTTGTTAGGGGC TERM 190 126846 - 126834 - g 78 -10.5 -3.29829 | TATACTTCGCGAGAA GCCGG ATG CCGGC TGTAAAAAGAAATCT CTL0103 126682 - 127347 + | putative lipoprotein TERM 191 127357 - 127397 + F 95 -12.6 -3.71291 | opp_overlap 127349 127361 127362, overlap 127362 ATATAAAGGCCATTC TAAAGGCCCCCTTCCCCC GGATA GGAGAAAGGGGGCTTTTG TATTTTCCGCTTATT TERM 192 127393 - 127361 - f 100 -13.4 -3.61371 | opp_overlap 127357 127362, overlap 127349 127362 AAAGGCCATTCTAAA GGCCCCCTTCCCCC GGATA GGAGAAAGGGGGCT TTTGTATTTTCCGCT TERM 193 127362 - 127392 + F 100 -12.5 -4.89567 | opp_overlap 127362 127361 127349, overlap 127357 AAGGCCATTCTAAAG GCCCCCTTCCCCC GGATA GGAGAAAGGGGGC TTTTGTATTTTCCGC TERM 194 127392 - 127362 - f 100 -16.9 -2.7634 | opp_overlap 127357 127362, overlap 127361 127349 AAGGCCATTCTAAAG GCCCCCTTCCCCC GGATA GGAGAAAGGGGGC TTTTGTATTTTCCGC TERM 195 127880 - 127896 + G 73 -8.7 -3.43774 | AGGATATAAAATGGG CAGCCGA TTC TTGGCTG TTGCCTTTTGTGTCG dagA 127452 - 128819 + | Na(+)-linked D-alanine glycine permease TERM 196 128857 - 128828 - f 100 -14.4 -3.86266 | ACAGTAGTACAAGAA TAGGGCCACGCT TTACAG AGCATGGCCCTA AATACAGGAGACCTC TERM 197 128941 - 128961 + G 73 -8.2 -3.62607 | overlap 128939 AGTATTCGTGTCAGG GCGTTGGG ATCTC CCCACCGC TGTCTTTTTCTGATG CTL0105 128877 - 129329 + | hypothetical protein CTL0106 129997 - 129338 - | SET domain-containing protein CTL0107 130782 - 129994 - | Zn-dependent hydrolase ftsK 133185 - 130786 - | cell division protein TERM 198 132120 - 132135 + g 73 -2.6 -5.12785 | gap 1, opp_overlap 132092, overlap 132119 132118 AGCTAGCCAATGTTT GCTG-TA AAA TAGCAGC TTTCTTTTTTAATTC TERM 199 133490 - 133449 - R 74 -8.9 -3.57144 | gap 2, opp_overlap 133463, overlap 133450 TTCGCCATGGTGAAA CTCCCCAACTAGCAGAGCG TGCAGG CGCTCTAC--GTTGGGGAA AGAGAAGTATAATGA TERM 200 133489 - 133450 - R 74 -10.2 -2.74144 | gap 2, opp_overlap 133463, overlap 133449 TCGCCATGGTGAAAC TCCCCAACTAGCAGAGCG TGCAGG CGCTCTAC--GTTGGGGA AAGAGAAGTATAATG TERM 201 134603 - 134587 - R 78 -10.1 -3.35597 | overlap 134585 GTTAGTTGTCAAAGA TCGGGGC TCA ACCCCGA GTCGGCATCTAATAC TERM 202 135504 - 135485 - R 71 -9.2 -2.65808 | opp_overlap 135500, overlap 135481 135482 AGTCGTAACAAGGTA GCCCTACC GGAA GGTGGGGC TGGATCACCTCCTTT TERM 203 136301 - 136289 - R 79 -7.7 -4.2354 | GAAAGGCGAAAAGAA CCCTT GTT AAGGG AGTGAAATAGAACCT TERM 204 139014 - 138975 - R 100 -17.2 -4.84527 | opp_overlap 138976 138981, overlap 138976 138981 GTCATAGACTAAAAA GGAGAAGGGGGTAGCCGC TAAC GCAGCTACCCCCTTTTCT TTTCTCTAAAATACC TERM 205 138976 - 139013 + r 100 -20.7 -4.54047 | opp_overlap 138975 138976 138981, overlap 138981 TCATAGACTAAAAAG GAGAAGGGGGTAGCCGC TAAC GCAGCTACCCCCTTTTC TTTTCTCTAAAATAC TERM 206 139013 - 138976 - R 100 -20.7 -3.49993 | opp_overlap 138976 138981, overlap 138975 138981 TCATAGACTAAAAAG GAGAAGGGGGTAGCCGC TAAC GCAGCTACCCCCTTTTC TTTTCTCTAAAATAC TERM 207 139008 - 138981 - R 100 -19.2 -3.77111 | opp_overlap 138976 138981, overlap 138976 138975 GACTAAAAAGGAGAA GGGGGTAGCCGC TAAC GCAGCTACCCCC TTTTCTTTTCTCTAA TERM 208 138981 - 139008 + r 100 -17 -5.23292 | opp_overlap 138981 138976 138975, overlap 138976 GACTAAAAAGGAGAA GGGGGTAGCCGC TAAC GCAGCTACCCCC TTTTCTTTTCTCTAA dmpP 140752 - 139457 - | Na(+)-translocating NADH-quinone reductase subunit F TERM 209 140542 - 140514 - G 70 -9.5 -2.8294 | opp_overlap 140513, overlap 140511 CATTGCTTACAAGCA GCTTTCCCTCCAC AAG GAGAAGGGATAGC GATTCCTGAATCTAA TERM 210 140878 - 140853 - R 100 -14.1 -3.47322 | opp_overlap 140858, overlap 140858 TTTTATTACAAGGAA GCAAAGCCCAA GGAC CTGGGCTTTGC TGAAAGGAGCTCGTT CTL0110 141239 - 140895 - | preprotein translocase subunit YajC TERM 211 141332 - 141354 + r 86 -11.4 -3.85698 | opp_overlap 141332 CAGCATTAGGAATAA GGCTTTCTTG TTT TAAGAAAGCC TTTCTAAGAGCACAA TERM 212 141354 - 141332 - R 83 -10.7 -3.75738 | opp_overlap 141332 CAGCATTAGGAATAA GGCTTTCTT GTTTT AAGAAAGCC TTTCTAAGAGCACAA CTL0111 142534 - 141344 - | rRNA methyltransferase TERM 213 142273 - 142305 + g 80 -3.6 -5.28176 | overlap 142274 TAATTGGGATTCCTT TTTTAGGTTTTGAT GGAGA AATAAAACCTAAAG TTTTTTCTCCATCAA TERM 214 142430 - 142441 + g 86 -5.8 -5.26119 | opp_overlap 142429 TGCAAATAAATTATG GAGC GCAA GCTC TTTTGTTTTTAAAGA TERM 215 142695 - 142669 - R 78 -9.4 -3.70469 | opp_overlap 142671 AATGAGAAGGGGAAA GAGGGCCCTGTT GAT AAAAGTGCCCTC TATAAAAAAGAGAAA hctA 143099 - 142722 - | histone H1--like developmental protein TERM 216 143775 - 143794 + G 70 -2.8 -4.92385 | AACAAGAGTTATGCT CGGAGCTT GTAA AACCTCTG TTTTCTTTAGCTGTA TERM 217 144338 - 144326 - g 72 -7.7 -3.90588 | CATGCGTTAAGTAAA CTTCC ATG GGAAG AGACTCTTGGAGAAC TERM 218 144884 - 144894 + G 87 -5.4 -5.46629 | opp_overlap 144862 144863 144884, overlap 144872 CCTGAGCCAGGGAAA GAAG GCT CTTC TTTTTTTAAGGTATT CTL0113 143495 - 145963 + | hypothetical protein hemG 147229 - 145955 - | protoporphyrinogen oxidase hemN 148599 - 147226 - | coproporphyrinogen III oxidase TERM 219 147654 - 147635 - GR 72 -5.8 -4.39166 | gap 1, overlap 147639 147644 GCCGATATACCAAAA CCTAGAAGA TCT TCTTC-AGG AGGAAGAGAGTACCC TERM 220 148482 - 148455 - GR 71 -4.8 -4.62622 | overlap 148451 148476 GGAAGTATAAAGAAA GAGGATCTTGCT CCTG AGCAAGCCTCTC CAAGGCCGTATAGCC hemE 149582 - 148572 - | uroporphyrinogen decarboxylase TERM 221 149462 - 149452 - GR 100 -4 -6.11644 | GTATCCAAAAAAAAA TCTT TCA AAGA ACGGTTTCTTTTCAG mfd 152834 - 149595 - | transcription-repair coupling factor TERM 222 150013 - 150023 + g 71 -2.4 -5.13521 | TGTTTATGCTTCAGG GCAG CCA CAGC TTTTTTCAGTAATTT alaS 155437 - 152810 - | alanyl-tRNA synthetase TERM 223 153208 - 153190 - G 82 -10.4 -3.61398 | opp_overlap 153174 153188 CTTGTTGCTGAACAA GCTGATTT TCC AAATCAGC AACTTGTTTGGCTAA TERM 224 156647 - 156631 - H 78 -10.1 -3.35597 | overlap 156629 GTTAGTTGTCAAAGA TCGGGGC TCA ACCCCGA GTCGGCATCTAATAC TERM 225 157548 - 157529 - H 71 -9.2 -2.65808 | opp_overlap 157544, overlap 157525 157526 AGTCGTAACAAGGTA GCCCTACC GGAA GGTGGGGC TGGATCACCTCCTTT TERM 226 158345 - 158333 - H 79 -7.7 -4.2354 | GAAAGGCGAAAAGAA CCCTT GTT AAGGG AGTGAAATAGAACCT TERM 227 161058 - 161019 - H 100 -17.2 -4.84527 | opp_overlap 161020 161025, overlap 161020 161025 GTCATAGACTAAAAA GGAGAAGGGGGTAGCCGC TAAC GCAGCTACCCCCTTTTCT TTTCTCTAAAATACC TERM 228 161057 - 161020 - H 100 -20.7 -3.49993 | opp_overlap 161020 161025, overlap 161019 161025 TCATAGACTAAAAAG GAGAAGGGGGTAGCCGC TAAC GCAGCTACCCCCTTTTC TTTTCTCTAAAATAC TERM 229 161020 - 161057 + H 100 -20.7 -4.54047 | opp_overlap 161019 161020 161025, overlap 161025 TCATAGACTAAAAAG GAGAAGGGGGTAGCCGC TAAC GCAGCTACCCCCTTTTC TTTTCTCTAAAATAC TERM 230 161052 - 161025 - H 100 -19.2 -3.77111 | opp_overlap 161025 161020, overlap 161020 161019 GACTAAAAAGGAGAA GGGGGTAGCCGC TAAC GCAGCTACCCCC TTTTCTTTTCTCTAA TERM 231 161025 - 161052 + H 100 -17 -5.23292 | opp_overlap 161020 161019 161025, overlap 161020 GACTAAAAAGGAGAA GGGGGTAGCCGC TAAC GCAGCTACCCCC TTTTCTTTTCTCTAA TERM 232 162874 - 162837 - g 70 -9.3 -2.80077 | gap 1, overlap 162834 162833 TCTCGACAAAATCTA CCTACTCTTAAAGAGACG AAA CGT-TCTTTCAGAGAAGG AGTAAGAAAGGGTGC TERM 233 163173 - 163139 - g 91 -12.2 -3.51934 | opp_overlap 163138 163137 163141, overlap 163137 GGGTTGGTACAAATA CATCGGTAGCAATGGC TTA GCCATTGCCATGGATG GGTTTGGAATGTCCG tktB 161262 - 163262 + | transketolase amn 164128 - 163259 - | AMP nucleosidase TERM 234 163307 - 163336 + g 91 -7.2 -5.28831 | gap 1 AGAAAGAGAATCATC GGCTTGCC-CAAA CTCCA TGTGCGGCAAGCC TTTTGTTTTCTTGAT efp 164384 - 164920 + | elongation factor P TERM 235 164950 - 164924 - T 91 -7.2 -5.50723 | opp_overlap 164930, overlap 164925 164927 GTATCAAAATAAAAA TTAGAAGGGGCA TTA CGCCCCTTCTTC AAGAAGGCGTTCCGC TERM 236 164949 - 164925 - T 85 -10.7 -3.88807 | opp_overlap 164930, overlap 164924 164927 TATCAAAATAAAAAT TAGAAGGGGCA TTA CGCCCCTTCTT CAAGAAGGCGTTCCG TERM 237 164947 - 164927 - T 100 -13.3 -3.50051 | opp_overlap 164930, overlap 164925 164924 TCAAAATAAAAATTA GAAGGGGCA TTA CGCCCCTTC TTCAAGAAGGCGTTC TERM 238 164930 - 164944 + T 73 -8.5 -3.61398 | opp_overlap 164927 164925 164924 AAATAAAAATTAGAA GGGGC ATTAC GCCCC TTCTTCAAGAAGGCG TERM 239 164966 - 164956 - T 73 -8.2 -3.61398 | opp_overlap 164955 CCCCTTCTTCAAGAA GGCG TTC CGCC ACTTTCCGAAATAAT CTL0122 165160 - 164936 - | hypothetical protein CTL0123 166079 - 165207 - | hypothetical protein groEL 167698 - 166160 - | 60 kDa chaperonin GroEL TERM 240 166997 - 167008 + g 75 -3 -5.08824 | GATCAGAGGAGTTTG TTCT TCGG AGAA TTTTTTGAGTAAGGG TERM 241 167587 - 167577 - G 74 -4 -5.00616 | CTCCCTTTGAAAAAA TCTT TCG AAGA AGAGGAGTACGCGGG TERM 242 168164 - 168177 + G 70 -5.3 -4.47456 | CGCCCTATTTTGTTG GAAGA ATGG TCTTC TTTGTTATTAGGTAT TERM 243 168852 - 168862 + G 75 -2.4 -5.38839 | opp_overlap 168848 CAAAAAAGAATTCTG CAGC AGA GCGG TTTTCTTTTTCTATG TERM 244 169447 - 169470 + G 76 -7.6 -4.19336 | gap 1, opp_overlap 169446 TGTGTTGTTAAAAGG GTCTCGTAGTT TAG AACTA-GAGAC TTTATTACCATGCTT murF 168146 - 169498 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 245 169807 - 169830 + G 89 -3.8 -5.63236 | opp_overlap 169808, overlap 169808 ATAAAGACAAAGCAT ATATCCCTAC AGCT GGAGGGATAG TTTTTGTTTTTGCAT TERM 246 169808 - 169829 + G 72 -7.3 -3.95502 | opp_overlap 169808, overlap 169807 TAAAGACAAAGCATA TATCCCTAC AGCT GGAGGGATA GTTTTTGTTTTTGCA TERM 247 170295 - 170317 + G 95 -11.4 -3.76383 | TTCATTTGTTGTGTT CTTCTAGCTA CCT TAGCTGGAAG TTGTCTTGGATTTTT mraY 169644 - 170654 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 248 171044 - 171081 + G 80 -9.9 -3.71075 | overlap 171043 TTATTCAAACGGTCT GGGATTCCTGCTTTCGC TATG GGGAATGTAGGAATTCC TATTTTAGATGGTAT TERM 249 171646 - 171684 + G 75 -10.2 -2.82015 | TAAGGGATGCACGTT CTCTTCGCTTCTTCCCGC TTT GCGAAAAGCTGCGAAGAG TGTAGTCGCTATGGG murD 170666 - 171916 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase nlpD 171913 - 172650 + | muramidase TERM 250 172683 - 172699 + GF 79 -3 -5.36441 | GAAATGGTTCCTGAT TTCCTG TTTAT TAGGAA TTTTTTCTCTCGGAC TERM 251 172759 - 172784 + GF 74 -9.9 -2.78463 | gap 1, overlap 172746 GAGGTTTTGGATCGA GCTTTGTCGTGT AGT ACAC-ACAAAGC TCTGATCCGGCAGAT TERM 252 173538 - 173548 + GF 76 -6.8 -4.52589 | GTATGTCATTGCAAT GCGA GCC TCGC TTTTATCTGGAGCGG ftsW 172666 - 173823 + | cell division protein murG 173732 - 174790 + | N-acetylglucosaminyl transferase TERM 253 176980 - 176990 + G 79 -3.2 -5.28176 | TAGGGAAAGGGTCGT GTCG TAT TGAC TTTTTTGTAGATGAA murC 174795 - 177206 + | UDP-N-acetylmuramate--alanine ligase CTL0132 177662 - 177243 - | hypothetical protein TERM 254 177423 - 177448 + g 84 -2.5 -5.626 | overlap 177425 TGTGAGAGAGCCGTT TTCAGGTTGAG CAAG CTCAACAAGGA TTTTTTTCTGCAATC CTL0133 178626 - 177820 - | hypothetical protein TERM 255 178179 - 178156 - G 77 -3.8 -5.12617 | opp_overlap 178156 TAAGGATTGAAAAAA GGGCAAAGCT GGGA AGGTTTGTCC TTCATAACCTATGAA rbsV 178780 - 179112 + | anti-sigma F factor antagonist TERM 256 179210 - 179232 + G 91 -12.8 -2.78384 | TTAAGCGGACAGTGA TTCTGTTGGC TGG GCCAACAGGA TCTGGTAAAACAGCG miaA 179116 - 180135 + | tRNA delta(2)-isopentenylpyrophosphate transferase CTL0136 181192 - 180140 - | hypothetical protein TERM 257 180402 - 180385 - G 100 -8.5 -5.49729 | AATTATCTAAAAAAA TTCTTGC CACC GCAAGAA TGCGGTAATAGAGTT TERM 258 181870 - 181902 + G 71 -10.1 -2.6518 | opp_overlap 181868, overlap 181869 CGCTGGTTAGGAAGT TTCTCTTCTCAAATT ATC AATTTGAGAAAAGAG CTTATGAATATTAGC CTL0137 181282 - 182964 + | hypothetical protein TERM 259 182993 - 183021 + F 100 -9 -5.87688 | opp_overlap 182992 182993 AGGAGTAAAAACAAG TAGTCAAAAGGT GAAGA GCCTTTTGGCTA TTTTTTTTAAATTGT CTL0138 183418 - 183777 + | hypothetical protein fabF 183788 - 185044 + | 3-oxoacyl-(acyl carrier protein) synthase II CTL0140 185041 - 185493 + | hypothetical protein TERM 260 185523 - 185560 + T 100 -12.8 -5.01546 | opp_overlap 185527, overlap 185528 AAAAAAACTTGGTTA GGAAGGGCCGTTGTGG AATCTC CCACAACAGCCTTTTC TTTTTCTGTCGATTT TERM 261 185556 - 185527 - T 78 -10.7 -3.1506 | opp_overlap 185523 185528 AAACTTGGTTAGGAA GGGCCGTTGTGGA ATCT CCCACAACAGCCT TTTCTTTTTCTGTCG TERM 262 185528 - 185555 + T 100 -11.3 -5.38839 | opp_overlap 185527, overlap 185523 AACTTGGTTAGGAAG GGCCGTTGTGG AATCTC CCACAACAGCC TTTTCTTTTTCTGTC ppa 186203 - 185574 - | inorganic pyrophosphatase ldh 186451 - 187491 + | leucine dehydrogenase cysQ 188485 - 187457 - | 3'(2'),5'-bisphosphate nucleotidase TERM 263 187657 - 187644 - G 70 -3.8 -4.91109 | overlap 187645 187648 TTTGGATTAGAAAAA GGGA GAGGAT TCCC CGATATATCTGTAAC TERM 264 188703 - 188683 - H 86 -9.9 -4.30719 | overlap 188695 CTTTTTGATAATAAA TGAAAAGAA TAG TTCTTTTCA GAATGCAAACCTGTT CTL0144 188783 - 189544 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 265 190842 - 190852 + G 74 -6.8 -4.4017 | opp_overlap 190842 TTATTCTTAAAAGGA CGAC TCA GTCG TTTTGTGAAGATTGG aas 189552 - 191165 + | long chain fatty acid--[acyl-carrier-protein] ligase TERM 266 191351 - 191408 + GT 93 -12.1 -3.73775 | gap 1, opp_overlap 191403 AGGTTATGGAGGTTC GCGCGCTATTTTAGGCTCTTCCTCG-CT GTT AGATGGGGTAGAGCATCAAATAGCGCAC TTTCATGGCGCTCCA TERM 267 192030 - 192010 - gT 70 -8.3 -3.31799 | opp_overlap 192009 192012 GAGAACTTGCGAGAA CACGATTAC GTC GTATTCGTG ACTATTTTGCTCAAA priA 194521 - 192260 - | primosome assembly protein PriA bioF 191208 - 192341 + | 8-amino-7-oxononanoate synthase TERM 268 193993 - 194004 + gT 74 -4.4 -4.91511 | CATCCAAAGTTTTTG CAGA TACC TCTG TTTTTCTCATCAGCT CTL0148 195165 - 194476 - | hypothetical protein TERM 269 194793 - 194772 - GH 89 -7.4 -4.9448 | opp_overlap 194775 AGCGATTAAAGAAAA GAATCTCA TGTTCC TGAGATTC ATGGACAAAAATGCC CTL0149 195321 - 195815 + | protein disulfide isomerase TERM 270 195889 - 195852 - f 76 -4.1 -5.2015 | opp_overlap 195823 195875 195877 195881, overlap 195881 TTAATAAGAGAAAAA CGTGTTCCCATTCTCGG ATTT CTAAGAAAGAGAAAACG ATCCAGTTTTCTCTT TERM 271 195875 - 195908 + F 85 -9.8 -4.07568 | opp_overlap 195852 195881, overlap 195877 195881 CATTCTCGGATTTCT AAGAAAGAGAAAAC GATCCA GTTTTCTCTTTCTA TTTTGGAGAAAGCAA TERM 272 195877 - 195906 + F 90 -12.4 -3.63744 | opp_overlap 195852 195881, overlap 195875 195881 TTCTCGGATTTCTAA GAAAGAGAAAAC GATCCA GTTTTCTCTTTC TATTTTGGAGAAAGC TERM 273 195881 - 195902 + F 78 -7.4 -4.45168 | opp_overlap 195852 195881, overlap 195877 195875 CGGATTTCTAAGAAA GAGAAAAC GATCCA GTTTTCTC TTTCTATTTTGGAGA TERM 274 195902 - 195881 - f 73 -7.4 -4.16842 | opp_overlap 195877 195875 195881, overlap 195852 CGGATTTCTAAGAAA GAGAAAAC GATCCA GTTTTCTC TTTCTATTTTGGAGA TERM 275 196821 - 196809 - g 77 -4.8 -5.00884 | ATTGCTTTGAAAAAA CTCC TTGTT GGAG GAATGTCCCGAGTTT TERM 276 197574 - 197585 + G 70 -3.6 -4.76312 | overlap 197566 GACGCTGCATCCATT CGGG ATGT CCTG TTTTTCCCTGTTATG lysS 196047 - 197627 + | lysyl-tRNA synthetase TERM 277 197645 - 197622 - T 85 -2.5 -5.69379 | opp_overlap 197639 ATAGAAGCAAAAAAA GATTAAAGT TTTTTC ACTTTCATC CCGGTTTTGCCATCT cysS 199117 - 197624 - | cysteinyl-tRNA synthetase TERM 278 198101 - 198080 - G 73 -5.9 -4.56367 | CAGCCTACAAATAAA GTCTCTTAA GCGT TTAAGTGAC TGGCGAGAAGCATGC TERM 279 198442 - 198459 + g 71 -8.5 -3.53563 | opp_overlap 198457 AATGCCATCCCGGGC GTCCTTT CCCA AAAGGAC TTTCCCAAAAAATCT CTL0152 199370 - 200419 + | hypothetical protein TERM 280 200448 - 200476 + T 100 -11.1 -5.82388 | ATCTAGTATTCCTCC CCATTCCATGC CTCTATA GCGTGGAATGG TTTTTTTTAGGATTT rnpA 200859 - 200497 - | ribonuclease P rnpA 201009 - 200872 - | 50S ribosomal protein L34 TERM 281 201313 - 201332 + H 71 -3.6 -4.94972 | AGAGAGCAGAGATCA CTGTAAGA AAAC TTTTACGG TTTTTAGTTGTGCTG rpmJ 201486 - 201623 + | 50S ribosomal protein L36 TERM 282 201788 - 201774 - g 74 -6.4 -4.46976 | AGGAAGAAAGAGAAA GAGCTC GGG AAGCTC TCAATAAAATGAGAA rpsN 201647 - 201952 + | 30S ribosomal protein S14 TERM 283 201965 - 201980 + T 100 -10.4 -5.56568 | TAGGACTTGTGTTGA GCCCCT TGAA AGGGGC TTTTTTTACTCGTCT CTL0156 202486 - 201986 - | hypothetical protein TERM 284 202075 - 202088 + g 76 -8.1 -4.08394 | overlap 202084 ATACCCATAATTCTT GGGGA TCGA TCCCC TTTTCAGGAGAGTGT CTL0157 202859 - 202608 - | putative integral membrane protein CTL0158 203139 - 203633 + | hypothetical protein TERM 285 203656 - 203631 - T 76 -9.1 -3.78234 | opp_overlap 203636, overlap 203636 ATTCAAACTGAAGAA TAAAAGGCTCT GTAT AGAGCCTTTTT TTTGGTTAGGATCCT TERM 286 203636 - 203651 + T 100 -9 -5.95166 | opp_overlap 203631 203636 AACTGAAGAATAAAA GGCTCT GTAT AGAGCC TTTTTTTTGGTTAGG TERM 287 203651 - 203636 - T 91 -9 -4.91987 | opp_overlap 203636, overlap 203631 AACTGAAGAATAAAA GGCTCT GTAT AGAGCC TTTTTTTTGGTTAGG uvrC 205418 - 203679 - | excinuclease ABC subunit C TERM 288 205320 - 205371 + g 71 -4.7 -4.67234 | gap 1, overlap 205317 205325 TAAAAAAGGGATGCG TTCACGGGAATCGCCTTTCTTT TGAAGATAT GAAGAAAGTCGATTCC-GTAAA TTTTTCGCCTTACCT mutS 207962 - 205500 - | DNA mismatch repair protein TERM 289 206389 - 206356 - G 83 -11.9 -2.78816 | opp_overlap 206354 206353, overlap 206358 206362 206366 CGATGTTCTACGATA TAGAAACAAAGCTCC TTAA AGAGCTTGGTTTCTA AAGTTTGTAGCTTAT TERM 290 206387 - 206358 - G 73 -10.1 -2.94218 | opp_overlap 206354 206353, overlap 206356 206362 206366 ATGTTCTACGATATA GAAACAAAGCTCC TTAA AGAGCTTGGTTTC TAAAGTTTGTAGCTT TERM 291 206379 - 206366 - G 71 -4.5 -4.65722 | opp_overlap 206354 206353, overlap 206362 206358 206356 CGATATAGAAACAAA GCTCC TTAA AGAGC TTGGTTTCTAAAGTT TERM 292 207406 - 207429 + g 87 -4.6 -5.52986 | ATACGTAAATGCTGT TGGAGTTGTT TAAT AACAGCTGCA TTTTTTTGATAAAAT dnaG 208295 - 210082 + | DNA primase CTL0163 210167 - 210454 + | hypothetical protein TERM 293 210477 - 210494 + F 100 -7.7 -5.72207 | opp_overlap 210477 TCAAGAGTCTATAGA CTGGGAA TTTC TTCCCGG TTTTTTTAATTTAAG CTL0164 210580 - 211071 + | hypothetical protein TERM 294 211123 - 211096 - T 100 -11.4 -5.93809 | opp_overlap 211097, overlap 211097 CCTTTATAAAAAAAA GGCCTTCTCTTT GTGA AAAGAGAAGGCT TTCTTTTTGTCTGGA TERM 295 211097 - 211122 + T 100 -14.9 -5.01422 | opp_overlap 211096 211097 CTTTATAAAAAAAAG GCCTTCTCTTT GTGA AAAGAGAAGGC TTTCTTTTTGTCTGG TERM 296 211122 - 211097 - T 100 -14.9 -4.15201 | opp_overlap 211097, overlap 211096 CTTTATAAAAAAAAG GCCTTCTCTTT GTGA AAAGAGAAGGC TTTCTTTTTGTCTGG glyQ 214165 - 211154 - | glycyl-tRNA synthetase TERM 297 214266 - 214247 - H 75 -9.4 -3.28712 | opp_overlap 214246 214250, overlap 214250 CCGGGCTCTGCAGAA CAAGGATT AAGA AATCCTTG ATATTCCTAGAGGAA TERM 298 214829 - 214801 - g 86 -10.4 -3.89055 | opp_overlap 214801 ATATATTGCGAGAAA GTTTTCCCAGGT AACAG ATCTGGGAAAAC TTCTAGATCCCATGG TERM 299 214801 - 214829 + G 95 -12.6 -3.36327 | opp_overlap 214801 ATATATTGCGAGAAA GTTTTCCCAGGT AACAG ATCTGGGAAAAC TTCTAGATCCCATGG TERM 300 215008 - 215041 + G 74 -4.7 -4.86773 | TGCTAGGATGAGTGG GAAGTTAAAAGCT ATTCTTCA AGCTATTAGCTTC TTTTTCATCATTTTC pgsA 214619 - 215227 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 301 215224 - 215203 - T 100 -14.5 -5.00895 | CTTATTACAGAAAAA TGACTCGCC GGAT GGCGAGTCA TAGGGAAGTTTATTG glgA 216658 - 215234 - | glycogen synthase TERM 302 215543 - 215527 - G 76 -9.5 -3.56109 | CAAACATAGAAGGAA TGCAGAT CAT ATCTGCA GCGGCGAAAATTTGT rplY 217235 - 217792 + | 50S ribosomal protein L25/general stress protein Ctc pth 217800 - 218339 + | peptidyl-tRNA hydrolase TERM 303 218751 - 218737 - g 73 -8.6 -3.6959 | opp_overlap 218736 218737 AGAGTATCATTTAAA CGAAGA TCT TCTTCG ATTCATGACTCTTAA rpsF 218477 - 218815 + | 30S ribosomal protein S6 rpsR 218832 - 219077 + | 30S ribosomal protein S18 rplI 219098 - 219601 + | 50S ribosomal protein L9 TERM 304 219613 - 219643 + F 74 -5.5 -4.77908 | gap 1, overlap 219613 219616 219616 TTAAACTTTTTGTTT GTTGGGGGAAGAGA TTCT TTTCTTCCCC-ACC TCTTTTTTTTATTTT TERM 305 219613 - 219645 + F 100 -3.4 -6.47325 | gap 1, overlap 219613 219616 219616 TTAAACTTTTTGTTT GTTG-GGGGAAGAGA TTCT TTTCTTCCCCACCTC TTTTTTTTATTTTTT TERM 306 219616 - 219642 + F 71 -8.1 -3.41254 | gap 1, overlap 219616 219613 219613 AACTTTTTGTTTGTT G-GGGGAAGAGA TTCT TTTCTTCCCCAC CTCTTTTTTTTATTT TERM 307 219964 - 219982 + G 77 -8.2 -4.05788 | opp_overlap 219967, overlap 219967 TGCAGGAGGGAGTAG TAATGCAG CAA CTGCATTG TTTGCTTTAAACCAA TERM 308 219967 - 219979 + G 76 -7.7 -4.15396 | opp_overlap 219967, overlap 219964 AGGAGGGAGTAGTAA TGCAG CAA CTGCA TTGTTTGCTTTAAAC ispE 219665 - 220531 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 309 220800 - 220782 - T 75 -6.7 -4.50122 | opp_overlap 220781, overlap 220799 CGATAGAAAAAAACA GCTCTGC CCCCT ACAGAGC CCTTTTAAAGGGGGA CTL0174 222186 - 220834 - | putative integral membrane protein TERM 310 222351 - 222311 - R 83 -11.3 -3.39742 | opp_overlap 222309, overlap 222309 222305 222312 CATAAAGAAGCAAGA GGTTTTTCTCGGATGAAGA ACC TCTTCATCCGAGAAAATGT AAGTACAAGAATGTT TERM 311 222350 - 222312 - R 100 -14.8 -2.62761 | opp_overlap 222309, overlap 222309 222305 222311 ATAAAGAAGCAAGAG GTTTTTCTCGGATGAAGA ACC TCTTCATCCGAGAAAATG TAAGTACAAGAATGT ptr 225235 - 222365 - | exported insulinase/protease TERM 312 224273 - 224263 - G 70 -5.4 -4.53648 | TAGATAAAATAGAAA TCAG TGA CTGA GCCCATCCTTGTAAG plsB 226288 - 225287 - | glycerol-3-phosphate acyltransferase TERM 313 225407 - 225397 - G 76 -6.8 -4.44667 | CTTCGGAAGAACAAA GCTC ATC GAGC AACAGTTCGTCTCCA TERM 314 226151 - 226174 + g 75 -3.1 -5.08824 | gap 1, opp_overlap 226152, overlap 226152 226154 CCATTGAGAACAAAG AGCTTCCGCT TTCTC AGCGG-AGCA TTTTTTAGATGCAGC cafE 227839 - 226301 - | ribonuclease E TERM 315 227585 - 227602 + g 78 -4.1 -5.11033 | opp_overlap 227584, overlap 227586 227600 TGCATCAGAATCTAT ATCGAAC ATCT GTTCGAA TTTTTTAGAATTCTC TERM 316 227586 - 227601 + g 70 -7.6 -3.65535 | opp_overlap 227584, overlap 227585 227600 GCATCAGAATCTATA TCGAAC ATCT GTTCGA ATTTTTTAGAATTCT TERM 317 227977 - 227953 - H 70 -2.9 -5.1101 | opp_overlap 227953 CGATTAGGTAAAAAA TTCTACAAAAA TGC TTGTTGTTGAA TAGTTTAATTTAGAA TERM 318 228704 - 228690 - g 75 -5.8 -4.74132 | AGAGTTTATCAAAAA CTTTTT GAA AAAAAG GCGGGACGTAACTCT CTL0178 228403 - 228723 + | hypothetical protein TERM 319 228859 - 228897 + GF 91 -8.2 -4.68593 | overlap 228828 228826 228824 TGTCCCTTGTCTGTC GCGGTATATTTTGGGGAG TCG TTCCACAAAATGCATCGC TTTTTGAATCCTGGG CTL0179 228663 - 228989 + | hypothetical protein rpmF 228973 - 229152 + | 50S ribosomal protein L32 TERM 320 229329 - 229370 + G 100 -9.3 -4.64844 | opp_overlap 229329, overlap 229331 CCACCAATTAATGAA TTCTCCGCTGTCTCGTTCC GTTC GGATCGTGACCGCAGAGGA TTTTGTCTCTATGGA TERM 321 229370 - 229329 - g 76 -9.3 -3.46824 | opp_overlap 229329 229331 CCACCAATTAATGAA TTCTCCGCTGTCTCGTTCC GTTC GGATCGTGACCGCAGAGGA TTTTGTCTCTATGGA TERM 322 229331 - 229368 + G 71 -9.7 -2.62187 | opp_overlap 229329, overlap 229329 ACCAATTAATGAATT CTCCGCTGTCTCGTTCC GTTC GGATCGTGACCGCAGAG GATTTTGTCTCTATG plsX 229174 - 230139 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 323 230761 - 230783 + G 95 -7.8 -5.1615 | ACGAGCAGCAACCTT GATTCTCC CCGTGAC GGAGAATC TTTTTTAGGTATTGC TERM 324 231509 - 231492 - g 87 -8.5 -4.57073 | opp_overlap 231481 CATTTTTGGCAAAAA TTGTCAG ATTT CTGACAA CGAGGGGCCAGTGGT TERM 325 231936 - 231946 + G 73 -5.4 -4.64861 | opp_overlap 231936 GGAAATTACCAATAA TTCC GGA GGAA TTTCTTTTACAGGAA TERM 326 232806 - 232816 + G 79 -6.8 -4.63542 | CTTCTCTGATATTTA TGGC GGC GCCA TTTTTACAGGTTCTC TERM 327 234487 - 234506 + G 73 -3.5 -5.04325 | overlap 234490 GAATACCGAAGTTTA GTTGGTC CTGTGA GACCTAC TTTTTATGCTTTGCA TERM 328 234620 - 234583 - g 84 -9.9 -3.88232 | opp_overlap 234594 GGCTTTACAGAACAA GGAAGAGAAGCGCGTTC TTTT GAAGACGCTTCCCTTAC CAATATCACCATTCC pmpD 230359 - 234951 + | polymorphic outer membrane protein TERM 329 234983 - 235010 + F 100 -12.9 -6.11243 | ACAGCAACCATTCTA TCCCTAATCTC CCATCA GAGATTAGGGA TTTTTTTTATTAGCT TERM 330 235041 - 235058 + F 100 -2.1 -6.11644 | gap 1 AGTCAATAAGTTGAG GAGAAGAT AGA ATCTT-TC TTTTTTTTTCGCTAG TERM 331 235927 - 235911 - g 82 -2.2 -5.61881 | opp_overlap 235923, overlap 235913 235915 235923 TTCGAAAAAGAAAAA CATGGT ATCAA ACCAGG AAGACGTGGTTCGAT CTL0184 235152 - 235946 + | hypothetical protein TERM 332 235954 - 235968 + T 71 -4.3 -4.8487 | opp_overlap 235954 CGATATAGAAGAAGA CGAAT GTCTA ATTCG TTGTTTTTTTAATAG TERM 333 235984 - 236014 + T 91 -3.3 -5.86332 | gap 1, opp_overlap 235986, overlap 235986 TTGTTTTTTTAATAG AAGCCTGGCCTGTA GTAA TA-AGACCAGGCTA TTTTTTTTGGATTCG TERM 334 235986 - 236012 + T 74 -5.9 -4.56715 | gap 1, opp_overlap 235986, overlap 235984 GTTTTTTTAATAGAA GCCTGGCCTGTA GTAA TA-AGACCAGGC TATTTTTTTTGGATT TERM 335 236012 - 235986 - T 73 -8.1 -3.65812 | gap 1, opp_overlap 235986 235984 GTTTTTTTAATAGAA GCCTGGCCTGTA GTAA TA-AGACCAGGC TATTTTTTTTGGATT CTL0185 236329 - 236030 - | hypothetical protein CTL0186 236712 - 236350 - | hypothetical protein TERM 336 236513 - 236523 + g 70 -2.6 -5.03314 | opp_overlap 236513 TTCTTGCGTAACCAA TTTA GAA TAAA TTTTTTGCCAATCAA TERM 337 236736 - 236726 - H 100 -2.6 -6.23317 | opp_overlap 236726 ATAAAAACAAAAAAA TAAA TCA TTTA GTTTTCGATAATTAT TERM 338 237217 - 237186 - g 72 -7.2 -4.04206 | opp_overlap 237176, overlap 237187 CTATGGGGATAGAAA CCCTGATGTTGGGA CCTA TCCCTACCCCAGGA GTGGCATTTATTACT CTL0187 236957 - 238333 + | phosphoglucosamine mutase TERM 339 239820 - 239803 - g 71 -4.2 -4.86613 | TAAAATTAAAAGAAA TTGCTT ACGTAG AAGCAA ATGCTTACCCTGCAG glmS 238344 - 240164 + | D-fructose-6-phosphate amidotransferase TERM 340 240154 - 240173 + F 89 -6.5 -5.47431 | overlap 240159 TGGCTAAATCTGTTA CTGTAGA GTAAAA TCTACAG TTTTTTCTCTCTTGA TERM 341 240664 - 240692 + G 83 -11.9 -2.6063 | overlap 240659 TAGTATTTTTTGCTT TGTTTTCCCCATT ATT AATGGCGAAAACA TCCATTATCGATCAA TERM 342 240979 - 240993 + G 71 -5 -4.67607 | GGGAAGCCATTGTGT TAGGAG CCG TTCCTA TTTCTTTCTTAGAAC tyrP 240267 - 241463 + | tyrosine-specific transport protein TERM 343 241485 - 241514 + F 85 -10.7 -4.03413 | CACTTCAAGTCTCAA GCTCGCATTCAGG ATTT CCTTTATGCGAGC TTTCTGTAAACAGAT TERM 344 242558 - 242580 + G 80 -6.3 -4.78157 | GATATTTTTAAATGG GATGCTCGT AAGAA ACGGGTATC TTTGTTCTTTTTAGT CTL0190 241646 - 242839 + | tyrosine-specific transport protein CTL0191 242881 - 243597 + | putative membrane transport protein TERM 345 243633 - 243659 + T 100 -12.5 -5.28176 | opp_overlap 243633 TTCTAGGAAAAAAAA GAGGTATTTAG AGTTC CTAAATACCTC TTTTTTATGGGTGAA TERM 346 243659 - 243633 - T 100 -13.2 -5.86061 | opp_overlap 243633 TTCTAGGAAAAAAAA GAGGTATTTAGA GTT CCTAAATACCTC TTTTTTATGGGTGAA ftsY 244549 - 243695 - | cell division protein TERM 347 244379 - 244358 - G 71 -8.8 -3.32066 | opp_overlap 244362, overlap 244348 244362 AATAATCTTTGATAA GAAAGAGC GAATAA GCTCTTTC ACTGCCCGTTCATCA TERM 348 245051 - 245035 - g 93 -10.1 -4.4017 | opp_overlap 245038 GGAAGTCGCAGAAAA GCAGCCG GAT CAGCTGC TTAAAATGACACTAC sucC 244619 - 245779 + | succinyl-CoA synthetase subunit beta sucD 245794 - 246669 + | succinyl-CoA synthetase subunit alpha TERM 349 248107 - 248158 + G 84 -10.8 -3.66784 | gap 1 GGGATTCTGGTAGTT GCTGTGGAGGCAGGCTCGCCTGCAG CTT CTGCAGGCGTCGCT-CCTGGACAGC TTATCTTAGCGGTGA htrA 246808 - 248301 + | serine protease TERM 350 248338 - 248355 + F 100 -11.3 -6.41805 | AGCTAGTCTAGTATG GGGACTC AATC GAGTCCC TTTTTTTTTTAATAA TERM 351 249386 - 249400 + G 75 -8.6 -3.79071 | overlap 249381 TTCAATTTTTGATCA GCAAGA TCT TCTTGC TTTACATGTTCTGGA TERM 352 250372 - 250336 - g 81 -11.8 -2.52464 | opp_overlap 250328, overlap 250340 250342 TCTCTTCTCAAGCTA CAGATACTGATCGA CTCTCACCC TCGATCAGTATCCG TGGTAAGGCTTTGAT CTL0196 248502 - 251426 + | metalloprotease-insulinase rmuC 252723 - 251440 - | DNA recombination protein pssA 253518 - 252727 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 353 254657 - 254635 - g 72 -10 -2.89602 | opp_overlap 254638, overlap 254634 TGTGCGAGAGGAAAT CAATGCTTTG ACG CAAAACATTG TCGCGGAAATAGAAG nrdA 254153 - 257296 + | ribonucleotide-diphosphate reductase subunit alpha TERM 354 257817 - 257798 - g 76 -9.4 -3.41936 | overlap 257796 GATTAAGGCCAAAGA TGATTTCC AGAT GGAAATCA CTGGCAAGGTATTAG TERM 355 258005 - 257966 - g 81 -7.5 -4.60797 | gap 1, opp_overlap 257971, overlap 257999 CTTCCACAGACAAAA TAAGATG-ATTGGTATTG GAGAA CAATATCAATACATCTTA AGAGATGAGACAATC nrdB 257334 - 258374 + | ribonucleotide-diphosphate reductase subunit beta TERM 356 258398 - 258419 + F 100 -10.2 -5.9873 | opp_overlap 258398 TCAAAATAGGAGAAA GCCTCAAC CATAGA GTTGAGGC TTTTTTTTGTCATAC TERM 357 258419 - 258398 - f 86 -10.9 -4.13711 | opp_overlap 258398 TCAAAATAGGAGAAA GCCTCAACC ATAG AGTTGAGGC TTTTTTTTGTCATAC trmB 258634 - 259308 + | tRNA (guanine-N(7))-methyltransferase CTL0202 259424 - 260008 + | putative SAM-dependent methyltransferase murB 260880 - 260005 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 358 260912 - 260956 + r 100 -13.6 -3.3568 | gap 1, opp_overlap 260926, overlap 260941 AAGTTGACTGTTCAA GGGAAGCGACACAAGCCCAAG ATAT CTTGGACG-GAGTCGCTTCCC TTACTCTGTCATTCT TERM 359 260943 - 260926 - R 70 -7.7 -3.55368 | opp_overlap 260912 260941 AGGGAAGCGACACAA GCCCAAG ATAT CTTGGAC GGAGTCGCTTCCCTT nusB 261519 - 261013 - | transcription antitermination protein NusB infC 261951 - 262511 + | translation initiation factor IF-3 rpmI 262498 - 262683 + | 50S ribosomal protein L35 TERM 360 262736 - 262750 + G 72 -7.1 -4.07568 | CAGTAGCTTCTAGAT CGCGT CGTAA ACGCG TTTTAAAACAAGCAA rplT 262702 - 263073 + | 50S ribosomal protein L20 pheS 263080 - 264108 + | phenylalanyl-tRNA synthetase subunit alpha TERM 361 264159 - 264149 - f 71 -6.8 -4.07885 | overlap 264136 264154 CACCTGTCTTGAAAA CAGG AGA CCTG AAAGGGTCCGGGGGT TERM 362 264212 - 264249 + F 100 -6.3 -6.22691 | TCCTTTTTACGAGAA CCTTTTGGGGTAAGAGT TGAG GCTCTTCCTCTGAAGGG TTTTTTTTGTTCTTA TERM 363 264274 - 264298 + F 70 -3 -5.12987 | TTCTTAGTTATTTTG TTATAAGC AAAATAAGC GCTTATAA TTTCTTTTTATTTAG TERM 364 265280 - 265256 - g 70 -3.6 -4.8622 | overlap 265258 CTTTTGAATGAAAAA GATCTTCTTG ATTTA CAAGAAAAAC ATTCGAAATCACTAG CTL0209 264419 - 266395 + | hypothetical protein CTL0210 267492 - 266392 - | putative membrane transport protein CTL0211 268559 - 267495 - | putative membrane transport protein TERM 365 268082 - 268104 + g 82 -3.4 -5.49579 | overlap 268085 TTTTCCCACAGTGAT CTATCGCA ATGAATA TGCGATCG TTTTCTTTTTTCTGC tilS 268657 - 269622 + | tRNA(Ile)-lysidine synthase TERM 366 271529 - 271539 + G 71 -6.8 -4.12456 | overlap 271533 271536 GACAAGGCTTTGTTG CGTC CAG GACG TTTTGACCGTCGTGT TERM 367 271865 - 271833 - g 95 -5.5 -5.80817 | overlap 271838 CTCAAGAGAAAAAAA CAACGGCATACCACG AGT CAGGGCATGCTATTG TAGGGCTTTGTGTTG ftsH 269783 - 272524 + | cell division protein TERM 368 272547 - 272570 + T 100 -12.5 -6.06529 | opp_overlap 272549 272551 TCTGGAGGTTTAGGA GAGAGCCCT TTTATT AGGGCTCTC TTTTTTTTGTGTGTG TERM 369 272568 - 272549 - T 72 -9.3 -2.79183 | opp_overlap 272547, overlap 272551 TGGAGGTTTAGGAGA GAGCCCT TTTATT AGGGCTC TCTTTTTTTTGTGTG TERM 370 272683 - 272712 + T 90 -10.9 -4.57569 | opp_overlap 272686, overlap 272686 TTACAAGACAATAAA AAAGGCTAAGAAA AACC TTTCTTAGCCTTG TTTTTCAACGAATCG TERM 371 272709 - 272686 - T 100 -12.6 -5.64304 | opp_overlap 272683 272686 CAAGACAATAAAAAA GGCTAAGAAA AACC TTTCTTAGCC TTGTTTTTCAACGAA TERM 372 272686 - 272709 + T 100 -12.6 -4.40561 | opp_overlap 272686, overlap 272683 CAAGACAATAAAAAA GGCTAAGAAA AACC TTTCTTAGCC TTGTTTTTCAACGAA pnp 274826 - 272739 - | polynucleotide phosphorylase/polyadenylase TERM 373 272824 - 272842 + g 71 -8.2 -3.42297 | overlap 272823 272827 272829 GCAAGCTTGTCTCCT TCTTTGAC AAA GTCAGAGA TATTGTCTACTTTTT TERM 374 274628 - 274602 - G 78 -8.7 -3.86897 | opp_overlap 274609 274612 274624 TTCACGTTTTAGAAA TCCTCCAGAGG TTCTT CCTGCGGAGGA AAACTTCTCTTGATA rpsO 275124 - 274855 - | 30S ribosomal protein S15 CTL0216 275350 - 275841 + | cytosine deaminase CTL0217 275873 - 276091 + | hypothetical protein CTL0218 276767 - 276063 - | putative integral membrane protein TERM 375 276864 - 276899 + r 80 -11.2 -3.13403 | overlap 276864 TCTCGCAAGGTTTGT TATTTGGGTGCATAGG AAAA CCTGTGCACCCCAAGA TATTAGTCCGAAGGA CTL0219 277420 - 276902 - | hypothetical protein TERM 376 276996 - 277018 + g 74 -4.8 -4.90013 | overlap 277015 AGAATTTTCATAGAT TCTGTGGATG TGG CGTTCACCGA TTTTTGGTTAGCTTG TERM 377 277298 - 277325 + g 73 -2.6 -5.17744 | overlap 277300 GGAGAGTTTCAGCAT GACTGCAATGCA GAAA TACATAGCAGAC TTTTTGTTAATCTCT CTL0220 277939 - 277433 - | hypothetical protein CTL0221 278446 - 277967 - | hypothetical protein TERM 378 278450 - 278466 + H 93 -4.5 -5.84011 | TGGTGCTGACATATT CTAAAAA ATT TTTTTGG TTTTTATTTTTTATT TERM 379 278702 - 278725 + H 81 -10.4 -3.40597 | overlap 278700 ATCAAGTGTTTAAGG TTTTTCGCAG AAGG CTGCGAGAAA TGTTTAAATGAAACC CTL0222 278763 - 278951 + | hypothetical protein TERM 380 279766 - 279752 - g 73 -5.7 -4.4261 | CTGTGAAGAGGAAAA TAGCG GGAAG CGCTA TGCTGAGGAGTGCTT TERM 381 280021 - 279999 - g 70 -2.7 -5.00616 | gap 1, opp_overlap 280003 TCCTTTCTGAAAAAA GCT-AGACGC GAAC GCTTCTTAGC TCAAGAGCAACTTTT CTL0223 278970 - 280187 + | putative integral membrane protein map 281019 - 280144 - | methionine aminopeptidase TERM 382 280244 - 280272 + g 74 -6.1 -4.42464 | overlap 280247 280248 CATGTTCGTGCCTCC CAATGGTTTATTG GGT CAATAAACCCTTC TTTCTTTCCGACATT TERM 383 280247 - 280269 + g 79 -7.8 -4.32678 | overlap 280244 280248 GTTCGTGCCTCCCAA TGGTTTATTG GGT CAATAAACCC TTCTTTCTTTCCGAC TERM 384 280248 - 280268 + g 84 -11.3 -3.18884 | overlap 280247 280244 TTCGTGCCTCCCAAT GGTTTATTG GGT CAATAAACC CTTCTTTCTTTCCGA CTL0225 281693 - 281052 - | putative integral membrane protein CTL0226 282309 - 281710 - | putative integral membrane protein CTL0227 284273 - 282504 - | ABC transporter permease TERM 385 283507 - 283528 + g 71 -2.3 -5.1925 | overlap 283503 283508 283523 GCAAAGACCCATTTT TTCCCAAAA GATC TTTTGGAAG TTTTTTCCATTCTAA TERM 386 284225 - 284194 - G 76 -6.6 -4.41177 | overlap 284188 284187 CATATAAAGCCAAAA CTCGGATAGTTTTG AGCA CAAAACTCCCAGAG TCCAATCAAGGGAAG CTL0231 287503 - 285800 - | sulfate transporter TERM 387 287317 - 287300 - G 73 -5.5 -4.64766 | overlap 287289 GGCAGAGGCTAAAAA GCCTCCA ATAA TTGAGGC CAATAGTCCTTGTAA CTL0231A 287895 - 287734 - | hypothetical protein CTL0231B 288144 - 287935 - | hypothetical protein TERM 388 288559 - 288573 + G 71 -2.1 -5.14819 | overlap 288541 GAAGCGTGCTGCTTT GGGTA TTACT TATCC TTTCTTTTTTCCTTT TERM 389 288981 - 288991 + G 74 -6.8 -4.39002 | overlap 288987 TGGAAAGCTGTATTA GGAG TTC CTCC TTTTATGGGGGCTTT CTL0232 288258 - 289523 + | putative membrane transport protein TERM 390 289727 - 289739 + G 70 -2.7 -5.03747 | overlap 289728 TTTGCAAGAATGCTC TTCAA GAT TTGAG TTTTTTAGAGCATTT TERM 391 289825 - 289843 + G 72 -9.6 -3.14132 | CTTGTTCAAAGCTCC GTTTCTGC ACA GCAGAAGC TTCGTACACAAGAAA TERM 392 290122 - 290141 + G 78 -10 -3.54307 | opp_overlap 290105 AATCACAAAGGGACT GCAGCTGA AGAG TCGGCTGC TTTAAGAACACTATT TERM 393 290603 - 290581 - g 83 -9.2 -3.9777 | opp_overlap 290580 GGTAAGAGCCATAAA GTAGGATTTC TAA GAATTCCTAC ATATAGTTGGCAGGA TERM 394 291079 - 291099 + G 74 -4.7 -4.81212 | overlap 291091 TCTAAACCGATTTGT GTTTTGATC AAT GAGCAAGAC TTTTCTTGTGCTGAC TERM 395 291312 - 291345 + G 76 -10.5 -3.06087 | gap 1 ACCGCATATCGATCT GCCTTTTACAGCGAAT GAT ATTCGCTATA-AAGGC TATTCCGAGTATCTT cpa 289633 - 291438 + | putative exported protease TERM 396 291465 - 291494 + F 95 -12.3 -4.03586 | gap 1, opp_overlap 291464 291463 GTTCATAGTAAGAGG GGGCTTTGCGGATT TAT AGTCC-CAAAGCCC TTGTTGTGTTTAAAC ispH 291533 - 292456 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 397 292489 - 292465 - T 95 -13 -3.63046 | opp_overlap 292463 292462 ATTATAATTAGAGAA GTCAGATGAG TTTAT CTCATCTGAC GGAATTTTTCTCACT copD2 293989 - 292508 - | hypothetical protein TERM 398 293278 - 293289 + g 71 -4.4 -4.87389 | overlap 293277 CGTGTAAGAGTCCTT CTCT CGCG AGAG TTTCTTTTTGGGCTG TERM 399 293856 - 293879 + g 81 -11.1 -3.34468 | opp_overlap 293854, overlap 293854 293852 AGGCTCCGAAGGATT GCTGCTTGA CCTGGT TCAAGCAGC TGTATTTCATTGGAG TERM 400 293887 - 293937 + g 83 -11.2 -3.52162 | overlap 293886 293891 293892 CAAGCAGCTGTATTT CATTGGAGAGGGCAGAGGCTTCTT CAC AAGAAGTCTCTGTCTGCTCTCCTG TTGCTATTGTTTGTA TERM 401 293891 - 293935 + g 100 -14.6 -3.31565 | gap 2, overlap 293887 293886 293892 CAGCTGTATTTCATT GGAGAG--GGCAGAGGCTTCTT CAC AAGAAGTCTCTGTCTGCTCTCC TGTTGCTATTGTTTG TERM 402 293892 - 293932 + g 100 -16.3 -2.81181 | overlap 293891 293887 293886 AGCTGTATTTCATTG GAGAGGGCAGAGGCTTCTT CAC AAGAAGTCTCTGTCTGCTC TCCTGTTGCTATTGT copB2 295521 - 294001 - | putative type III secretion translocator TERM 403 294143 - 294158 + g 70 -7.6 -3.6502 | opp_overlap 294142 294143, overlap 294149 TCCCAATTTATTAAT TCGATG CGTG CATCGA TTTGAGTACAGCGTG TERM 404 294159 - 294179 + g 73 -2.5 -5.12617 | overlap 294149 CGATGCGTGCATCGA TTTGAGTAC AGC GTGCACGAA TTTTTTGACTGCTTG TERM 405 294711 - 294723 + g 70 -7.7 -3.72893 | opp_overlap 294697 AGGCAGAAAAATCTG CAAGG ATA CCTTG TTTAGTGAGAAGGTA lcrH 296145 - 295549 - | type III secretion chaperone CTL0238 297515 - 296067 - | hypothetical protein TERM 406 296268 - 296294 + gr 73 -2.9 -5.17576 | overlap 296269 TTCCTCAGACCAGTC GTAGGAGTCTC CAATT GGGACGCCTAG TTTTTTAGCTTGATC TERM 407 296865 - 296850 - GR 91 -7.6 -4.77165 | TGTTTGAGAAGAAAA TTCCCA TTCC TGGGAA GAAAGTTGAGCCGTT TERM 408 297143 - 297131 - GR 74 -7.7 -3.87694 | overlap 297126 297125 AAGAAAATATGGAAA CCTTC CCA GAAGG TGCTGGAGGTGTTTG xerD 299277 - 298375 - | site-specific tyrosine recombinase XerD TERM 409 298623 - 298660 + g 100 -4.9 -6.50115 | AACGATCGAGTTTTT TCCCTCTGATAGACA AAAATACA TGTTCTTCAGAGGGA TTTTTTTTTTGTAGT TERM 410 299798 - 299814 + G 86 -8 -4.68512 | TATACGCGTTCTATA GCGGAT TTGCC ATCCGC TTCTTTTTATTCTGG TERM 411 299905 - 299891 - g 74 -4.3 -4.9645 | opp_overlap 299886 299891, overlap 299886 ATTAGAAGAAGAAAA GATCT TAAAG AGATC CTTCCTTTCCTATTC TERM 412 300154 - 300197 + G 78 -5.5 -5.06414 | gap 2, overlap 300156 AGGGAATGAGGCTGT TCCTTTTTCATTACTGAGAGC TGCA GCTCTCAGT-ATGC-GGAGGA TTTTTATTCAAGAGA CTL0244 299525 - 300514 + | hypothetical protein TERM 413 301334 - 301305 - g 80 -11.6 -2.72558 | opp_overlap 301309 301311, overlap 301309 ACAACCTTTGAATTA TAAAGAGCTAGC AGATCA GCTAGCTCTCTA TTGCAAGCAGATGCA TERM 414 301330 - 301309 - g 89 -10.2 -4.05446 | opp_overlap 301309 301311, overlap 301305 CCTTTGAATTATAAA GAGCTAGC AGATCA GCTAGCTC TCTATTGCAAGCAGA TERM 415 301309 - 301330 + G 76 -10.2 -3.06696 | opp_overlap 301309 301305, overlap 301311 CCTTTGAATTATAAA GAGCTAGC AGATCA GCTAGCTC TCTATTGCAAGCAGA TERM 416 301498 - 301479 - g 79 -10.8 -2.9039 | opp_overlap 301473, overlap 301481 ACAGTATTTTATAGA TACCATGC ATCA GCATGGTA TCGGGGTGATTTTAG glgB 300529 - 302745 + | glycogen branching enzyme CTL0246 303775 - 302756 - | hypothetical protein TERM 417 303858 - 303868 + r 73 -2.6 -5.24551 | opp_overlap 303858 AATCAAAAACAAACA TTTT ATA AAAA TTTTTATTAATTTCA CTL0247 305203 - 303998 - | hypothetical protein TERM 418 305352 - 305374 + r 70 -8.5 -3.27022 | gap 1, opp_overlap 305355, overlap 305353 305355 TAGACGGGAAGAGGA TA-AGGGGGC CGGA GCCCCCTCTA TTACTCTAGAATCGC TERM 419 305353 - 305372 + r 74 -9.2 -3.20078 | opp_overlap 305355, overlap 305352 305355 AGACGGGAAGAGGAT AAGGGGGC CGGA GCCCCCTC TATTACTCTAGAATC TERM 420 305370 - 305355 - R 85 -11.8 -3.52341 | opp_overlap 305353 305352 305355 ACGGGAAGAGGATAA GGGGGC CGGA GCCCCC TCTATTACTCTAGAA TERM 421 305355 - 305370 + r 83 -11.8 -3.16071 | opp_overlap 305355, overlap 305353 305352 ACGGGAAGAGGATAA GGGGGC CGGA GCCCCC TCTATTACTCTAGAA pmpE 308277 - 305380 - | polymorphic outer membrane protein TERM 422 305644 - 305664 + g 73 -8.3 -3.65902 | GGCTTGAGGTCTTTG GGTAGCATT CAT AAAGCTACC TTTAACTCCAATAGG TERM 423 306914 - 306896 - G 75 -6 -4.64844 | TCGATACATAGAAAA CCATTACT GAG AGTAAGGG GTGCAGGTGTTTTTG TERM 424 308052 - 308066 + g 80 -3.5 -5.26316 | TTATTGTGACAGCAG CTCCT TCATT GGGAG TTTTTTGTAGAATAG pmpF 311378 - 308280 - | polymorphic outer membrane protein TERM 425 310512 - 310528 + g 76 -9.5 -3.54488 | opp_overlap 310509, overlap 310510 TGCATGAGTAGATTT GTTCCAT CCT ATGGAAC TATTGTTTGAAAAAA pmpG 311543 - 314581 + | polymorphic outer membrane protein TERM 426 316414 - 316431 + G 86 -7.7 -4.66987 | TAATCCGCTTTTTGT GGGATCG CTGA CGATTCC TTTTGTTACCCTATC TERM 427 316556 - 316578 + G 70 -9.2 -2.81464 | opp_overlap 316554 316553 GATTGGACGAAACCT CCCTTAGC TCCTGAT GCTAAGGG TATGGTGCCTCCTAA TERM 428 316872 - 316905 + G 83 -8.9 -4.09243 | AGGCGACTGCTGCCT GCCATTACGAAAATG GGTC CATATTCGGAGTGGC TTTTGGACAACTATA pmpH 314612 - 317632 + | polymorphic outer membrane protein TERM 429 317625 - 317638 + F 79 -3.9 -5.45802 | opp_overlap 317625 TGGGCTTGAATAGAA TCTTT TAAT AAAGA TTTTTCTTTTCAGAA TERM 430 317775 - 317811 + F 93 -3.7 -5.86061 | opp_overlap 317754 CTAGAATTTTAGAGA GCAGGATCTTTTGTTTG ATT CAAACAAAAGGATGAGC TTTTTTTTCATAAAA CTL0252 318047 - 318643 + | hypothetical protein TERM 431 318705 - 318670 - T 100 -12.8 -5.626 | opp_overlap 318676, overlap 318671 GACGTGAGAAAAAAA TGAAAAGTCTTAGAGA AGGG CCTCTAAGACTTTTCT CAAGCTCTAAAACGC TERM 432 318704 - 318671 - T 100 -16.3 -3.96475 | opp_overlap 318676, overlap 318670 ACGTGAGAAAAAAAT GAAAAGTCTTAGAGA AGGG CCTCTAAGACTTTTC TCAAGCTCTAAAACG TERM 433 318676 - 318699 + T 89 -9.7 -4.39426 | opp_overlap 318671 318670 AGAAAAAAATGAAAA GTCTTAGAG AAGGGC CTCTAAGAC TTTTCTCAAGCTCTA pmpI 321374 - 318738 - | polymorphic outer membrane protein TERM 434 319924 - 319939 + g 75 -3.2 -5.14477 | ATAGAAAGATTAGGG GCGTGG ATAG TTACGC TTTTTTCAGTATCTA TERM 435 321432 - 321421 - H 85 -3 -5.78622 | TTATGTCAAAAAAAA GTAA TAAT TTAC AGACTTTTTCCTCAA TERM 436 321585 - 321619 + H 84 -4.6 -5.56372 | opp_overlap 321611, overlap 321586 321589 321610 321611 TTATATTTATTATCG ATTTTTTTAATTTTAA TTT TTAAAATTAAAATAAG TTTTTATTTTAGTTT TERM 437 321586 - 321618 + H 77 -8.1 -3.90163 | opp_overlap 321611, overlap 321585 321589 321610 321611 TATATTTATTATCGA TTTTTTTAATTTTAA TTT TTAAAATTAAAATAA GTTTTTATTTTAGTT TERM 438 321589 - 321615 + H 75 -9.8 -2.98404 | opp_overlap 321611, overlap 321586 321585 321610 321611 ATTTATTATCGATTT TTTTAATTTTAA TTT TTAAAATTAAAA TAAGTTTTTATTTTA CTL0255 321649 - 323421 + | hypothetical protein TERM 439 323492 - 323454 - T 91 -9.6 -5.14563 | opp_overlap 323455 323458 323477 323485, overlap 323458 GTTTGTATCAAAAAA CTAAGCCCACCAAGAAGA AAT TCTCTTTGGTGGGCTTCT TTTTTTATTCAAAAA TERM 440 323455 - 323491 + T 100 -13.1 -5.7946 | opp_overlap 323454 323458, overlap 323458 323477 323485 TTTGTATCAAAAAAC TAAGCCCACCAAGAAGA AAT TCTCTTTGGTGGGCTTC TTTTTTTATTCAAAA TERM 441 323488 - 323458 - T 100 -14.8 -3.96447 | opp_overlap 323455 323458 323477 323485, overlap 323454 GTATCAAAAAACTAA GCCCACCAAGAAGA AAT TCTCTTTGGTGGGC TTCTTTTTTTATTCA TERM 442 323458 - 323488 + T 100 -14.8 -4.96435 | opp_overlap 323458 323454, overlap 323455 323477 323485 GTATCAAAAAACTAA GCCCACCAAGAAGA AAT TCTCTTTGGTGGGC TTCTTTTTTTATTCA TERM 443 323485 - 323516 + T 76 -9.7 -3.07233 | gap 1, opp_overlap 323458 323454, overlap 323458 323455 323477 GAAATTCTCTTTGGT GGGC-TTCTTTTTT TATTC AAAAAAGAAAGCCC TCTTCAAGATTATAC CTL0256 323838 - 323566 - | hypothetical protein gatC 324039 - 324341 + | aspartyl/glutamyl-tRNA amidotransferase subunit C gatA 324353 - 325828 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 444 327048 - 327070 + G 73 -8.5 -3.69216 | overlap 327047 GATAGAATGGTCTCT TCTTTTGGG GAAAG CCCAGAAGA TATTTTGCGTAGACA gatB 325830 - 327296 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 445 327366 - 327326 - T 88 -9.2 -4.58242 | gap 1, opp_overlap 327329 327331, overlap 327331 327334 AAAAAAGGCATAAAA GAGAAGAACCCTCTTCATA AAAC TATGGAGAGGGTTCT-CTT TTTAAAAGGCTTTAT TERM 446 327329 - 327364 + T 100 -14.2 -4.58685 | opp_overlap 327326 327331 327334, overlap 327331 AAAGGCATAAAAGAG AAGAACCCTCTTCATA AAAC TATGGAGAGGGTTCTC TTTTTAAAAGGCTTT TERM 447 327331 - 327362 + T 100 -16.8 -3.90316 | opp_overlap 327326 327331 327334, overlap 327329 AGGCATAAAAGAGAA GAACCCTCTTCATA AAAC TATGGAGAGGGTTC TCTTTTTAAAAGGCT TERM 448 327362 - 327331 - T 100 -14.6 -4.03183 | opp_overlap 327331 327329, overlap 327326 327334 AGGCATAAAAGAGAA GAACCCTCTTCATA AAAC TATGGAGAGGGTTC TCTTTTTAAAAGGCT TERM 449 327359 - 327334 - T 85 -10.5 -4.12066 | opp_overlap 327331 327329, overlap 327331 327326 CATAAAAGAGAAGAA CCCTCTTCATA AAAC TATGGAGAGGG TTCTCTTTTTAAAAG CTL0260 328486 - 327395 - | hypothetical protein TERM 450 327451 - 327429 - G 89 -12 -3.25823 | opp_overlap 327412 TTCTTTTGAGATGAA TCGGAAGAGG ATT CCTCATCCGA AGATTCGCTGCTGTC TERM 451 327532 - 327546 + g 74 -7.8 -4.07568 | TGCGAGAGAGCTTTA CGACGC GGC GTGTCG TTTTCGGAGAAGAAG CTL0261 329183 - 328614 - | hypothetical protein CTL0262 329497 - 330447 + | hypothetical protein rnhC 331365 - 330463 - | ribonuclease HIII CTL0264 331621 - 332052 + | hypothetical protein htrB 333406 - 332039 - | lipid A biosynthesis lauroyl acyltransferase CTL0266 334794 - 333538 - | hypothetical protein CTL0267 335585 - 334791 - | putative integral membrane protein TERM 452 334993 - 335017 + g 72 -9.9 -2.74537 | overlap 334992 334985 CCGAGTGCTGCACGA TGACGCGTTCC CAT GGATCGCGACA GTTGTGTGGTATCAT TERM 453 335486 - 335466 - G 73 -7.5 -4.13421 | AAGAAAAGACAACAA GCCAAAGAC GAG GTCCATGGC GCCTGTTCCCCAGAA TERM 454 335659 - 335637 - H 85 -9.2 -4.26076 | TTATTTTCAGCAAAA CAAGAAGCTG TAC CAACTCCTTG AAACTTATTACGGAT TERM 455 336263 - 336278 + G 82 -6.8 -4.8384 | GTATGGTTGCGCTCG GCGCTC ACAT GAGTGC TTTTTGGATTGTTTG TERM 456 336775 - 336761 - g 71 -4.2 -4.81851 | overlap 336762 ACCGAAATGCAAAAA CTCCTG TTA CAGGAC TGGATCAGTTCCCTA TERM 457 336919 - 336904 - g 82 -3.3 -5.55769 | GTGTATAAGAAAAAA TCTTG GAGCTG CAAGA AGGGGATCTTATGGA TERM 458 337006 - 337018 + G 74 -7.7 -4.02253 | ACAGAGGTAGGGCGT CAACC TTG GGTTG TTTATGGCTTATTAA cydA 335860 - 337200 + | cytochrome d ubiquinol oxidase subunit I TERM 459 337431 - 337461 + G 84 -9.8 -3.85184 | overlap 337423 337451 TTTGCTGGATTGTTT GCAGGGTTCC CGACCGCTTAT GGAACCCTGC TTTCCATCTTTTACA cydB 337212 - 338273 + | cytochrome d ubiquinol oxidase subunit II TERM 460 338283 - 338314 + T 100 -14.6 -3.28712 | opp_overlap 338290, overlap 338290 TACTAATTGCAGTAG GGTACAAGGCTCTT GAAA AGGAGCCTTGTATC TTGTGCAAACAAAAG TERM 461 338290 - 338307 + T 72 -7.7 -3.72788 | opp_overlap 338290, overlap 338283 TGCAGTAGGGTACAA GGCTCTT GAAA AGGAGCC TTGTATCTTGTGCAA TERM 462 338399 - 338379 - T 79 -8.3 -4.06633 | opp_overlap 338381 GAGAAAGTTAAAGAA TAGTTGCAG CAG CTGCAGCTA GTTCGGAACGTTCCG CTL0270 339675 - 338371 - | hypothetical protein CTL0271 339884 - 340612 + | hypothetical protein CTL0272 340798 - 342099 + | hypothetical protein TERM 463 342107 - 342146 + T 100 -10.2 -6.04324 | opp_overlap 342112 342115, overlap 342110 342113 GGGCATAAGCAAGTT CAATAGGAGTCTTGTTAC TTAG GTAACAAGACTCTTCTTC TTTTTTCTTTTTTGC TERM 464 342110 - 342143 + T 100 -11.9 -4.97159 | opp_overlap 342112 342115, overlap 342107 342113 CATAAGCAAGTTCAA TAGGAGTCTTGTTAC TTAG GTAACAAGACTCTTC TTCTTTTTTCTTTTT TERM 465 342141 - 342112 - T 87 -12.3 -3.11178 | opp_overlap 342110 342107 342113, overlap 342115 TAAGCAAGTTCAATA GGAGTCTTGTTAC TTAG GTAACAAGACTCT TCTTCTTTTTTCTTT TERM 466 342113 - 342140 + T 100 -15.8 -4.4634 | opp_overlap 342112 342115, overlap 342110 342107 AAGCAAGTTCAATAG GAGTCTTGTTAC TTAG GTAACAAGACTC TTCTTCTTTTTTCTT TERM 467 342138 - 342115 - T 90 -12.6 -2.76046 | opp_overlap 342113 342110 342107, overlap 342112 GCAAGTTCAATAGGA GTCTTGTTAC TTAG GTAACAAGAC TCTTCTTCTTTTTTC CTL0273 342634 - 342161 - | hypothetical protein TERM 468 342768 - 342752 - H 70 -2.9 -5.10767 | overlap 342755 GACGTAAGAGAAAAA TCACTGA AAG CCAGAGA GACATTCTAACAGAA TERM 469 343137 - 343147 + H 71 -8.2 -3.40597 | opp_overlap 343100 343136 GGAGCTCGCGAACAC CGGG TCA CCCG TATTTAGGTAACAAC TERM 470 343614 - 343602 - H 72 -7.7 -3.72893 | overlap 343611 TACCTGTTTAGGAAA GCAGT TAA ACTGC AAACTTTGTAAGCAG TERM 471 343779 - 343792 + G 89 -3.7 -5.69262 | opp_overlap 343779 ACTTTAGACAATCGA GAGGG CTGC CCCAC TTTTTCTTTTTATGA TERM 472 344196 - 344212 + G 100 -8.7 -4.83169 | GGACTTGTGTATGAG GGGACCA AAG TGGTTCC TTTTTCTACCAAGCT TERM 473 344960 - 344941 - g 72 -9.4 -3.11302 | overlap 344940 GTAAGATGTTAAAAG CCAATGAA TCCA TTCATTGG ACTCCTGGGCATATC TERM 474 346393 - 346419 + G 76 -6.6 -4.46112 | TGCACAAAGGGCAGA TGGTTGTTTCTC TAG GAGAAGAGACCA TTTCTTTAGATAAAG TERM 475 346480 - 346492 + G 79 -7.7 -4.3898 | overlap 346476 AAGGATTTGTAGCGA GAAGC TCA GCTTC TTTTGTAGCAGTACT ileS 343680 - 346790 + | isoleucyl-tRNA synthetase TERM 476 346815 - 346835 + T 100 -6.2 -5.94597 | opp_overlap 346815 CATTGAGCAAAAAAA GAGGTCTT ATTAA AAGATCTC TTTTTTTTGCTCTTA TERM 477 346835 - 346815 - T 83 -4 -5.53991 | opp_overlap 346815 CATTGAGCAAAAAAA GAGGTCTT ATTAA AAGATCTC TTTTTTTTGCTCTTA lepB 348734 - 346848 - | signal peptidase I TERM 478 346916 - 346906 - G 86 -6.8 -4.9448 | ATGCAGTAAAGAAAA GCTC CTA GAGC CAATCCATTTACGAG TERM 479 348505 - 348517 + g 76 -2.7 -5.38951 | GTAGCTCGGAGTTTG GATTT AGG GAATC TTTTTTGTATGGCTT TERM 480 348551 - 348565 + g 76 -10 -3.27475 | opp_overlap 348551, overlap 348549 CTTGCTTAGCAAAAA GGGAAG CAT CTTCCC TATTCTGATCCAAAA TERM 481 348565 - 348551 - G 100 -10 -4.72272 | opp_overlap 348549 348551 CTTGCTTAGCAAAAA GGGAAG CAT CTTCCC TATTCTGATCCAAAA CTL0276 349663 - 348920 - | hypothetical protein TERM 482 349625 - 349615 - G 86 -2.6 -5.80364 | ATGCCAAGAAAAAAA TAAA AAC TTTA AGAAGGTTTTGAGGG TERM 483 349764 - 349750 - g 100 -5 -6.02546 | overlap 349752 TCAAATGAAAAAAAA CACTCA TCC TGAGTA TAGACAAGTTCTGTT TERM 484 349762 - 349752 - g 73 -5.4 -4.63519 | overlap 349750 AAATGAAAAAAAACA CTCA TCC TGAG TATAGACAAGTTCTG TERM 485 350031 - 350004 - g 70 -7.8 -3.60792 | gap 1, overlap 350017 CTCCTAAGCCTGAAA CCGTTGTGGAAGA TGT TCTTCC-CAAGGG TAAGAAGAAATCTCC rpmE 349739 - 350065 + | 50S ribosomal protein L31 type B TERM 486 350098 - 350115 + F 100 -9.8 -6.11229 | opp_overlap 350098 GTTATCTAGAGAAAA GCGGGG CGAACA CCCCGC TTTTTTTGTTTTAAT TERM 487 350115 - 350098 - f 89 -10.5 -4.55287 | opp_overlap 350098 GTTATCTAGAGAAAA GCGGGGC GAAC ACCCCGC TTTTTTTGTTTTAAT prfA 350253 - 351332 + | peptide chain release factor 1 CTL0279 351316 - 352188 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase ffh 352185 - 353531 + | signal recognition particle, subunit FFH/SRP54 TERM 488 353831 - 353817 - g 86 -5.7 -5.36441 | TCGTTAGACAAAAAA GACGA GCTTA TCGTC AGCGTCTTGCTGCAA rpsP 353522 - 353872 + | 30S ribosomal protein S16 TERM 489 354079 - 354093 + G 73 -10 -3.02511 | GCTTTTGATGGCAGA GCCTGT GGT ACAGGC TATTAGAAGCATAAG trmD 353888 - 354946 + | tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein rplS 354972 - 355337 + | 50S ribosomal protein L19 TERM 490 355512 - 355528 + G 76 -9.4 -3.44284 | opp_overlap 355502, overlap 355510 GACGAGGCTGGGAGA GGGCCT CTTGC AGGCCC TGTTGTTGCTGGAGC TERM 491 355704 - 355762 + G 91 -7 -5.5604 | gap 3, opp_overlap 355718 355721, overlap 355704 355719 355722 GATGAGATCAATATT TT-GGAG-GCTAC-CAAGGAGGCTATGGT TCAA GCCATAGCTTCTTTGCGAAGCACTCCCGA TTTTTTATTGGTTGA TERM 492 355704 - 355761 + G 77 -8.6 -3.91997 | gap 2, opp_overlap 355718 355721, overlap 355704 355719 355722 GATGAGATCAATATT TTGGAG-GCTAC-CAAGGAGGCTATGGT TCAA GCCATAGCTTCTTTGCGAAGCACTCCCG ATTTTTTATTGGTTG TERM 493 355719 - 355744 + G 80 -10.5 -3.53444 | opp_overlap 355718 355721, overlap 355704 355704 355722 TTGGAGGCTACCAAG GAGGCTATGGT TCAA GCCATAGCTTC TTTGCGAAGCACTCC TERM 494 355722 - 355741 + G 75 -8.6 -3.90744 | opp_overlap 355721 355718, overlap 355719 355704 355704 GAGGCTACCAAGGAG GCTATGGT TCAA GCCATAGC TTCTTTGCGAAGCAC rnhB 355401 - 356054 + | ribonuclease HII TERM 495 356091 - 356102 + G 74 -4.4 -4.98255 | AAGACGGGGTTCAAT GCTT TCCC AAGC TTTTTATCATTAGCG gmk 356045 - 356662 + | guanylate kinase CTL0286 356655 - 356957 + | hypothetical protein metG 356957 - 358609 + | methionyl-tRNA synthetase TERM 496 358664 - 358639 - T 79 -8.3 -4.0641 | opp_overlap 358639 CTTCACGGAGAGAAA GAGGGGTTTCA TTTA TAGAACCCCTC TTTTTTTTGTGCAAA TERM 497 358639 - 358664 + T 100 -8.3 -5.93809 | opp_overlap 358639 CTTCACGGAGAGAAA GAGGGGTTTCA TTTA TAGAACCCCTC TTTTTTTTGTGCAAA recD 360988 - 358748 - | exodeoxyribonuclease V alpha chain TERM 498 359327 - 359344 + g 89 -7.1 -5.00616 | opp_overlap 359325 359340 AAGGACTTGAATATC TTTGGTA AAGA TACCAAA TTTTTTAGGAACAAA TERM 499 359968 - 359986 + g 71 -2.4 -5.11112 | TTTGTGAAGAGCTGG CATGAAGA GCT TCTTTTTG TTTTTCTTCCAATTT CTL0289 362216 - 361236 - | putative membrane transport/efflux protein TERM 500 361418 - 361397 - G 73 -7.3 -4.24285 | TACATAGGTAAGAAA GAATCCATC CAAA GATGGGTTC AAAGATAAGAAGAGC TERM 501 362163 - 362142 - G 78 -8.7 -3.74872 | ATCTAGGTCAGCAAA GTTCCCTAG CATA CTAGGGATC ACGAAAACCATTCCC TERM 502 363059 - 363073 + G 91 -8.6 -4.7254 | TCGCTGATTTTCCTG GAGAGA GTT TCTCTC TTTTTAATGGGGGAT CTL0290 362599 - 363372 + | putative protein ligase CTL0291 364494 - 363337 - | hypothetical protein TERM 503 364668 - 364680 + r 71 -3.3 -5.12707 | opp_overlap 364669, overlap 364669 CGCCTCGGACAGTAT ACTCC CTT GGAGC TTTTTTAGCATTTGG CTL0293 365384 - 365040 - | hypothetical protein TERM 504 365075 - 365086 + g 78 -4.4 -5.16237 | TCGTTTTTTGAGAGT TCTG GAAG CAGA TTTTTTCATAACCTT dcd 365978 - 365406 - | deoxycytidine triphosphate deaminase TERM 505 366051 - 366038 - H 79 -2.4 -5.64274 | TTAGTTAGAAAAAAA GAGA TAAAAC TCTC AACACTACAGCATGT TERM 506 366099 - 366112 + G 95 -3.1 -5.96894 | CGCAACTTTTTAATG CCTTT GTGC AGAGG TTTTTTTCTTTAAAT CTL0295 366065 - 366217 + | hypothetical protein ruvB 366259 - 367263 + | Holliday junction DNA helicase B TERM 507 367581 - 367591 + G 74 -6.8 -4.28713 | AACCTCTTGATGGAG CAGC CTC GCTG TTTGTTAATGGTATT CTL0297 367265 - 368077 + | hypothetical protein TERM 508 368109 - 368132 + T 100 -11 -5.72616 | opp_overlap 368109 GCTTGGTAGCAAAAA GACCCATCTC TAAT GAGCTGGGTC TTTTTTTATCTAGAT TERM 509 368132 - 368109 - T 91 -11 -4.72272 | opp_overlap 368109 GCTTGGTAGCAAAAA GACCCATCTC TAAT GAGCTGGGTC TTTTTTTATCTAGAT CTL0298 370138 - 368138 - | putative glycosyl hydrolase TERM 510 370241 - 370209 - R 95 -12.9 -3.53012 | opp_overlap 370211 370216 370235, overlap 370211 370216 GGGGGGGGGCTTAAA CACAAAAGGAAGAGA GAC CCTCTTCCTTTTGTT GTATGATAGCAAAAC TERM 511 370239 - 370211 - R 100 -15.5 -3.34398 | opp_overlap 370211 370216 370235, overlap 370209 370216 GGGGGGGCTTAAACA CAAAAGGAAGAGA GAC CCTCTTCCTTTTG TTGTATGATAGCAAA TERM 512 370211 - 370239 + r 100 -14.8 -3.54475 | opp_overlap 370209 370211 370216, overlap 370216 370235 GGGGGGGCTTAAACA CAAAAGGAAGAG AGACC CTCTTCCTTTTG TTGTATGATAGCAAA TERM 513 370234 - 370216 - R 90 -9.6 -4.78848 | opp_overlap 370211 370216, overlap 370211 370209 GGCTTAAACACAAAA GGAAGAGA GAC CCTCTTCC TTTTGTTGTATGATA TERM 514 370216 - 370234 + r 91 -8.9 -4.85918 | opp_overlap 370216 370211 370209, overlap 370211 GGCTTAAACACAAAA GGAAGAG AGACC CTCTTCC TTTTGTTGTATGATA CTL0299 370762 - 370259 - | putative type III secretion system chaperone TERM 515 371152 - 371170 + H 74 -5.2 -4.86731 | opp_overlap 371152 371155, overlap 371155 TTCTCTGAAGATAAA GAGGTTCC GAA GGGACGTC TTTTATTTGAAAAAG ssb 371228 - 371701 + | single-strand DNA-binding protein TERM 516 372263 - 372248 - g 77 -6.2 -4.59027 | opp_overlap 372248 AATGATCACACAAAA GAACAA AAAA TTGTTC TTCTTGGTCTAGGGA TERM 517 372903 - 372929 + G 84 -3.6 -5.42265 | overlap 372896 372905 CCATGAAGGAAGACA TGGCTGGAGCGG CTA CCGTTCTAGGAA TTTTTTCTGCTTTAG CTL0301 372044 - 373543 + | leucyl aminopeptidase TERM 518 373574 - 373608 + F 100 -12.5 -5.4756 | opp_overlap 373594 ATTAAATAATATGTG TGGTTAGTTTTTAAT AAAAA GTTAAAAACTAACCA TTTTTTATTAAAGTT TERM 519 373606 - 373594 - f 70 -2.7 -5.06816 | opp_overlap 373574 AGTTTTTAATAAAAA GTTAA AAA CTAAC CATTTTTTATTAAAG hct2 373681 - 374352 + | histone-like protein 2 TERM 520 374383 - 374409 + F 100 -10.3 -5.61913 | gap 1, opp_overlap 374382 TGATTTTCTAAGTAG CCGGGAATAAGA ATTC TCTT-TTCCCGG TTTTTTGTATTTATT CTL0303 374507 - 375451 + | hypothetical protein CTL0304 375546 - 376259 + | hypothetical protein TERM 521 377192 - 377174 - g 82 -8.2 -4.33785 | AGATTTACAAAATAA TGCTCCTT CGG AAGGAACA GGTTCACATACAGGT TERM 522 377429 - 377454 + G 82 -8.3 -4.27519 | CAAAAAGGATAACGG GACTTATTCGC TTTT GCGAAGAGGTC TTTATCTTATCACCT CTL0305 376350 - 377822 + | hypothetical protein TERM 523 377830 - 377856 + T 100 -12.4 -4.4767 | opp_overlap 377836, overlap 377831 GTTATTAACTATTTG AGTTAAGGGAGA GAA TCTCCCTTAACA TTTTATACTGAATCG TERM 524 377831 - 377855 + T 100 -15.9 -3.2812 | opp_overlap 377836, overlap 377830 TTATTAACTATTTGA GTTAAGGGAGA GAA TCTCCCTTAAC ATTTTATACTGAATC TERM 525 377850 - 377836 - T 76 -10 -3.07291 | opp_overlap 377831 377830 AACTATTTGAGTTAA GGGAGA GAA TCTCCC TTAACATTTTATACT CTL0306 379548 - 377881 - | hypothetical protein TERM 526 378678 - 378692 + g 83 -9.2 -3.98913 | opp_overlap 378674 TTGGGAGATCAGTGC CCTCGG CAG CCGGGG TTATTTCGGTATCAG TERM 527 379254 - 379270 + g 78 -9.5 -3.67792 | opp_overlap 379254 379257, overlap 379257 TTTGCTTGTACATCA CAATGTC GGT GACATTG TTTCCCTGCATGTCA CTL0307 381275 - 379584 - | hypothetical protein TERM 528 381280 - 381298 + r 81 -3.2 -5.61689 | overlap 381281 TTTTTATTCATTTTT TCAATTAA AAA TTAATCGA TTTTTTATTGGTTTT TERM 529 381312 - 381325 + r 90 -2.5 -5.93252 | GATTTTTTATTGGTT TTAAT ATCG ATTAA TTTTTTATTTTTAAA hemN 382466 - 381336 - | coproporphyrinogen III oxidase TERM 530 382274 - 382258 - G 80 -8.7 -3.91084 | overlap 382261 GCAGGGGGAACTAAA GAAGGAG TCC CTCCTCC AAAGAATACTGTATC TERM 531 382271 - 382261 - G 71 -6.8 -4.0825 | overlap 382258 GGGGGAACTAAAGAA GGAG TCC CTCC TCCAAAGAATACTGT TERM 532 382334 - 382310 - G 80 -11.5 -2.69073 | opp_overlap 382310, overlap 382307 382306 AGTGAGAACAACGTA GAGGGGCTA GTTTTTT TAGCCCCTC TTTAATGACAGCTTC TERM 533 382310 - 382334 + g 93 -12.2 -3.737 | opp_overlap 382310 382307 382306 AGTGAGAACAACGTA GAGGGGCTAG TTTTT TTAGCCCCTC TTTAATGACAGCTTC CTL0309 382902 - 382456 - | hypothetical protein TERM 534 383151 - 383161 + H 83 -5.4 -5.41143 | opp_overlap 383151 ATACTTAAAAAAAAA GCAA AGT TTGC TTTTTTTGAAAAATA TERM 535 383161 - 383151 - H 100 -5.4 -6.13 | opp_overlap 383151 ATACTTAAAAAAAAA GCAA AGT TTGC TTTTTTTGAAAAATA TERM 536 385441 - 385460 + G 76 -10.8 -2.66842 | opp_overlap 385417 385440 385444, overlap 385440 385438 TCTGCGGGAGCATAC GAAGAGAG ACCT CTCTCTTC CTCTTATCATTTTTT TERM 537 385541 - 385551 + G 71 -6.8 -4.15044 | opp_overlap 385537 385541 TTTGGAATGAAGGGA GGCT TCA AGCC TTTCTTGGAAGACGA sucA 383234 - 385945 + | alpha-ketoglutarate decarboxylase sucB 385949 - 387046 + | dihydrolipoamide acetyltransferase CTL0312 387806 - 387075 - | hypothetical protein gcpE 389623 - 387815 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 538 389493 - 389529 + g 70 -6 -4.2717 | gap 1 TGTCTAACCGTTCCA TCCACATCTGTGGTGGC TGTA GTCGTCATAGAT-TGGA TTTTGATGGAGTGCT TERM 539 389587 - 389600 + g 76 -6.7 -4.52857 | TTACTGGGAGGGTTT TGCGT CGAA ACGCA TTTTGTATACAGGGT TERM 540 389768 - 389731 - R 100 -13.7 -3.26947 | opp_overlap 389730 389737 389750, overlap 389737 TAAGCTTTAGATCAA TTTAAAGGAAGGTCTCC ATGG AGAAACCTCCCTTTAAA AATTGTTTATAAATT TERM 541 389762 - 389737 - R 75 -8.3 -3.79787 | opp_overlap 389730 389737 389750, overlap 389731 TTAGATCAATTTAAA GGAAGGTCTCC ATGG AGAAACCTCCC TTTAAAAATTGTTTA CTL0314 390866 - 389775 - | hypothetical protein fer 391221 - 390946 - | ferredoxin TERM 542 392005 - 391986 - g 82 -5 -5.40072 | opp_overlap 391987, overlap 391987 CGTCTGTTAAAAAAA GCTCTCTT TTAG AAGAGAGT GATTATTTCTCCGCC TERM 543 392004 - 391987 - g 75 -8.5 -3.83561 | opp_overlap 391987, overlap 391986 GTCTGTTAAAAAAAG CTCTCTT TTAG AAGAGAG TGATTATTTCTCCGC TERM 544 392741 - 392756 + G 71 -4 -4.89477 | CTTCCGTTAAAAATA TCAGAG AATT CTTTGA TTTTCTTATTGAGAG flhA 391403 - 393220 + | type III secretion system protein TERM 545 393558 - 393568 + G 82 -6.8 -4.91109 | AAGCAAGCGATTCGA GAGC TAT GCTC TTTTTATCATAAAAG fliA 393328 - 394089 + | RNA polymerase sigma factor sigma-28 tyrS 394248 - 395486 + | tyrosyl-tRNA synthetase TERM 546 395756 - 395784 + G 71 -9.7 -2.60161 | gap 1, opp_overlap 395752 395750 395749, overlap 395755 395753 TGATGAAATGATTGC CTCCCTGCTTCC TTTCTT GGAAG-AGGGAG ATATTCTCATTGATG TERM 547 396803 - 396814 + G 73 -5.8 -4.48713 | TGATGGATATCGTAC GGTG GATT CACC TTTATTCTTAGTGCA gnd 395496 - 396938 + | 6-phosphogluconate dehydrogenase TERM 548 396973 - 396941 - T 72 -6.3 -4.50976 | opp_overlap 396947, overlap 396944 396947 TTTTAGAGCATAAAA CAAGAAGGCCCAGTA AAC TACTGGGTCTTTTTT ATGAAGCAATATAGC TERM 549 396970 - 396944 - T 80 -8 -4.36649 | opp_overlap 396947, overlap 396941 396947 TAGAGCATAAAACAA GAAGGCCCAGTA AAC TACTGGGTCTTT TTTATGAAGCAATAT TERM 550 396947 - 396967 + T 100 -11.9 -5.24129 | opp_overlap 396947 396944 396941 AGCATAAAACAAGAA GGCCCAGTA AAC TACTGGGTC TTTTTTATGAAGCAA TERM 551 396967 - 396947 - T 86 -9.7 -4.27842 | opp_overlap 396947, overlap 396944 396941 AGCATAAAACAAGAA GGCCCAGTA AAC TACTGGGTC TTTTTTATGAAGCAA lepA 398807 - 396999 - | GTP-binding protein LepA TERM 552 397033 - 397055 + g 71 -7 -4.12947 | overlap 397052 TCAACAAACGCCGTG TTCGGAATGG ATA CTTTTCCGAA TTCTTTCATTCGTTT TERM 553 397257 - 397235 - G 100 -12.8 -3.37796 | opp_overlap 397234 397228 397235 397237 397251 GCTGAGGAGGGATAA CATCTACGAG TTT CTCGCAGATG CTTCTGCCTTTTGAT TERM 554 397235 - 397257 + g 74 -10.6 -2.71188 | opp_overlap 397235, overlap 397234 397228 397237 397251 GCTGAGGAGGGATAA CATCTACGAG TTT CTCGCAGATG CTTCTGCCTTTTGAT TERM 555 398737 - 398725 - G 76 -7.7 -4.16016 | opp_overlap 398725 398728 GTACTTTCTAACAAA CGATC TGC GATCG TAGATTTCCCGTGGT TERM 556 398936 - 398965 + r 83 -7.8 -4.61527 | opp_overlap 398939, overlap 398939 TTTGAACACAAAAGA AAAGCCCCGTCC GAGATA GAACGGGGCTTC TTTTTAGAGAATTTT TERM 557 398962 - 398939 - R 100 -11.7 -5.26907 | opp_overlap 398939 398936 GAACACAAAAGAAAA GCCCCGTCC GAGATA GAACGGGGC TTCTTTTTAGAGAAT TERM 558 398939 - 398962 + r 86 -9.5 -4.40963 | opp_overlap 398939, overlap 398936 GAACACAAAAGAAAA GCCCCGTCC GAGATA GAACGGGGC TTCTTTTTAGAGAAT CTL0321 400579 - 398993 - | ADP,ATP carrier protein TERM 559 399077 - 399109 + g 75 -5.6 -4.63675 | gap 1 AGCTTCTGCTAATTC CTGTTCTTTAGCAGC GGAT GCAGCCAA-GAACAG TTTGTTTAGTTTAGT TERM 560 400035 - 400047 + g 72 -6.3 -4.39989 | AGAGCGTAGAAACGT TTAGC TTC GCTAA TTTTAGTAATTTCAT TERM 561 400619 - 400643 + r 84 -10.9 -3.71174 | TTTATTGTTAAGTTT TCTTTGTTGAT CAA ATCAACGAAGA TTTAAAGTATTTCTT TERM 562 400691 - 400665 - R 77 -6.7 -4.57569 | GTATTTCTTTAAAAA GTCGTGAAA AAATTTTGA TTTCACGAC TCCCTATTTCGGCTG CTL0322 401406 - 400930 - | hypothetical protein TERM 563 401153 - 401169 + g 70 -7.9 -3.58343 | opp_overlap 401153 CTGCGCTTTTTAGAA CCTCGAG GAG CTCGTGG TTTAGGGCTAATGGA TERM 564 401435 - 401447 + H 71 -3.4 -5.09521 | GTGGGTAGTCTAGTT CTAC AGATG GTAG TTTTTGCTTTATTAA TERM 565 401574 - 401587 + H 75 -2.4 -5.37593 | TTGCTTTTTTCGCAA TCTC ATTTTA GAGA TTTTTTGATTTGGAC TERM 566 401623 - 401612 - H 73 -3 -5.18371 | opp_overlap 401612 TTGGACAAAAGAAAA TGAA GTAC TTCA GATTGTTTTCTAAGT TERM 567 401862 - 401878 + H 74 -5.8 -4.52873 | TCCTGTTAAAAGTAT CTTCGC GATAA GCGAGG TTCTTTTTGTGGAGG TERM 568 401921 - 401933 + H 73 -2.7 -5.18726 | CAGGAGGCTTGTATC CTTTA AAA TAGAG TTTTTCTTATGACCC CTL0323 402067 - 403047 + | ABC transport protein, solute binding component TERM 569 403220 - 403252 + G 76 -7.9 -4.07687 | gap 1, overlap 403222 GGACTGATTCGTGCT TCTTCTGGCCAAAG CTTGTT CTTTGGTCAG-AGA TTTTCCAAGGCACAT TERM 570 403222 - 403251 + G 71 -9.4 -3.04398 | overlap 403220 ACTGATTCGTGCTTC TTCTGGCCAAAG CTTGTT CTTTGGTCAGAG ATTTTCCAAGGCACA TERM 571 403462 - 403488 + G 84 -6.5 -5.0133 | opp_overlap 403462 TCGTCAAATAGGTAA GCTCTCTGGAG GACAA CAACAGAGAGC TTTTTTAGCGCGGTC CTL0324 403040 - 403819 + | ABC transport protein, ATP-binding component TERM 572 404716 - 404734 + G 82 -8.2 -4.26938 | AGGGTGGATCACTCG CTATTTCC GAA GGAAATGG TTCTTATTTTCTCGA CTL0325 403820 - 405175 + | ABC transport protein, membrane permease TERM 573 405181 - 405195 + G 74 -10 -3.18433 | overlap 405179 TGGTTGCTAGTATTT CTCCGT ACT ACGGAG TATCATTTTTAGAGT CTL0326 405165 - 406121 + | ABC transport protein, membrane permease dxr 406148 - 407287 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase CTL0329 410266 - 409289 - | exported protein CTL0328 407483 - 409342 + | putative protease TERM 574 410404 - 410385 - TR 72 -5.1 -4.78266 | opp_overlap 410385, overlap 410373 AAATAAAACAACAAA GTTTGTT TCAATT AACAAAC AGTTTTTGCGAAGGA recF 411521 - 410424 - | recombination protein F TERM 575 410605 - 410587 - G 91 -11.8 -3.51924 | TGTTGATCTAGACAA GCATGGAT GTC ATCCATGC ACAGAAGAGGATGGA TERM 576 411427 - 411461 + g 81 -10.8 -3.28924 | opp_overlap 411431 411438 GTCTTTCCTTGTGCA TTAAGACCGAAGATGG AAT TCATCTCCGGTCCTAA TTCTAAACGAAGATC TERM 577 411457 - 411431 - G 95 -13.1 -3.14132 | opp_overlap 411427, overlap 411438 TTCCTTGTGCATTAA GACCGAAGATG GAATT CATCTCCGGTC CTAATTCTAAACGAA dnaN 412771 - 411521 - | DNA polymerase III subunit beta smpB 412901 - 413356 + | SsrA-binding protein apbE 414284 - 413334 - | thiamine biosynthesis lipoprotein TERM 578 413653 - 413674 + gT 77 -6.5 -4.63479 | overlap 413650 ACAGCCCAAGATCTT CCGGAAGGA TGTT TCCCTCTGG TTTTGATTTCTCCTC TERM 579 414105 - 414085 - GT 82 -8.4 -4.3534 | opp_overlap 414097 TTCCAATTATTAAAA GTTTGATC GATAT GATCAAAC ACTCGATCAATTTCC folD 415117 - 414254 - | methylenetetrahydrofolate dehydrogenase (NADP+) CTL0335 415630 - 415235 - | putative integral membrane protein ltuB 415955 - 416248 + | late transcription unit B protein TERM 580 416384 - 416338 - g 100 -17.6 -3.54129 | overlap 416340 416355 TATATTGGTCTCAAA GACCGCCCAGTAATAAAGATCT CCA AAATCTTTATCACTGAGCGGTT AGGCATGAGTGCCTG TERM 581 416382 - 416340 - g 100 -20.2 -3.34715 | overlap 416338 416355 TATTGGTCTCAAAGA CCGCCCAGTAATAAAGATCT CCA AAATCTTTATCACTGAGCGG TTAGGCATGAGTGCC TERM 582 416475 - 416495 + G 100 -12.6 -5.93809 | TTTTTTGGTTTTTTT CGCAAGGC CCAGA GCCTTGCG TTTTTTTTGTCCAAA CTL0337 416281 - 416601 + | hypothetical protein TERM 583 418064 - 418042 - g 80 -9.8 -3.68261 | opp_overlap 418041 418038 418042, overlap 418035 GTAGAACATCGTAAA GGTCCTGGAG GAC CTCCAGACCC ATTGATTTATCAATA CTL0338 416611 - 418293 + | hypothetical protein CTL0338A 418290 - 418772 + | hypothetical protein TERM 584 418787 - 418797 + T 95 -5.4 -5.81412 | ATCTTGCAATCCAAT CAAG CAG CTTG TTTTTTTTCGCTAGG CTL0339 419871 - 418786 - | phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein TERM 585 419460 - 419471 + g 75 -3 -5.1675 | AAGCGAGTTCTCCAT CTAT TGCC ATAG TTTTTTGATGCATGA CTL0340 421781 - 420042 - | putative decarboxylase TERM 586 420104 - 420122 + g 73 -8.2 -3.73072 | CCTCATCAGCTTCGA CTTCCTTA GGA TAAGGAGG TTTCATGAGGGCATT TERM 587 421302 - 421284 - G 70 -9.6 -2.85351 | overlap 421286 GCGCTGCATACGATA CATCCCTA AAT TAGGGACG CCATTCTCAGGAGAT rpmB 422170 - 421901 - | 50S ribosomal protein L28 malQ 423902 - 422319 - | 4-alpha-glucanotransferase TERM 588 423513 - 423496 - G 81 -4.1 -5.41143 | opp_overlap 423496 TACTCTTGAAAAAAA TCTCTCT TCAT AGAGCGA ACTTTTTCATAATGT scc1 424346 - 423906 - | type III secretion chaperone copN 425649 - 424384 - | low calcium response protein E (TTSS effector protein) lcrD 427793 - 425667 - | low calcium response protein D ( to be part of the TTSS apparatus) sctU 428875 - 427793 - | type III secretion system protein TERM 589 428828 - 428855 + g 70 -2.6 -5.06052 | gap 1, overlap 428829 CTGCCCCTTTTTTCT AGCG-TCCCGAAG ACG CTTGGGGGTCGCC TTTTCTGTTTTTTCG TERM 590 429101 - 429089 - H 79 -4.8 -5.29445 | CCTTAATAATAAAAA GGCT GTGTT AGCC TTAAGAAAAAGCTGT CTL0347 429132 - 430232 + | translation-associated GTPase ribF 431146 - 430241 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 591 431101 - 431079 - GT 80 -4.9 -5.09895 | CACCCATCGAAAAAA CCTATAGTA ACAGA TTCTATAGG ATTAGAGGACGGGAG truB 431828 - 431103 - | tRNA pseudouridine synthase B rbfA 432237 - 431866 - | ribosome-binding factor A infA 434934 - 432244 - | translation initiation factor IF-2 TERM 592 432831 - 432851 + gr 70 -2.6 -4.97957 | AACCTTGAACATCTG CTTTGATA ATCAG TTTCAAAG TTTTCTTGTTCTGTA TERM 593 432894 - 432909 + gr 70 -7.6 -3.6761 | AGTTTGGTCGTTTTT TCTGCA AAGC TGCAGA TCTTTGTTGGCCAGC TERM 594 433917 - 433938 + gr 76 -7.3 -4.33808 | opp_overlap 433917 433915, overlap 433933 TGCCATGAATAAAGA GCTTCTGAA TAAG TTCTGAAGC TTTTAGCTTCATTTC TERM 595 433938 - 433917 - GR 70 -7.3 -3.72374 | opp_overlap 433917 433933, overlap 433915 TGCCATGAATAAAGA GCTTCTGAA TAAG TTCTGAAGC TTTTAGCTTCATTTC TERM 596 433933 - 433949 + gr 77 -9.5 -3.53091 | opp_overlap 433917 433915, overlap 433917 CTTCTGAATAAGTTC TGAAGCT TTT AGCTTCA TTTCAGCAGCAAGAT TERM 597 434166 - 434176 + gr 79 -8.2 -4.15654 | GATCTCGTTCAGATC CGCG CTT CGCG TTGTTATTATTGTTG TERM 598 434475 - 434505 + gr 78 -5.5 -4.96427 | gap 1, opp_overlap 434489 CTTCAATACGCTCCG GAGTC-TCTGGAGA AGTC TCTTCTGAAGACTC TTTCTTTTCTTCTTG TERM 599 434684 - 434712 + gr 100 -12.5 -3.65812 | opp_overlap 434680 434681 GCAAATGAAGAGCGA TCTTTTGCGCGAA TTC TTCGCGCAGTAGA TTCTGTTGCGCCCAA TERM 600 434896 - 434908 + gr 71 -4.1 -4.75404 | CTGTGCGTTCTTAAT CTTCA ACT TGAGG TTTTTCGTCAACTTT nusA 436195 - 434891 - | transcription elongation factor NusA TERM 601 435418 - 435432 + gr 76 -10 -3.14344 | GAATGATATTTTTGA TGCGAG ATC CTCGCA TTCCTACAAAAGCTC TERM 602 436248 - 436271 + r 100 -12.5 -3.90045 | opp_overlap 436240 436250, overlap 436243 AAAATAATGCTAACG GAGCAGAGC CCTAGA GCTCTGCTC TTATGTTTGCTCTTC TERM 603 436269 - 436250 - R 73 -10 -2.55818 | opp_overlap 436248 436243, overlap 436240 AATAATGCTAACGGA GCAGAGCC CTAG AGCTCTGC TCTTATGTTTGCTCT rpsA 438022 - 436313 - | 30S ribosomal protein S1 TERM 604 437223 - 437238 + g 70 -7.6 -3.61178 | overlap 437215 ATGACTTCCAATTCT TGGTTG AGTT CAACCA TTTCGGATGGGTGAC trxB 438267 - 439322 + | thioredoxin reductase acpS 439328 - 439687 + | 4'-phosphopantetheinyl transferase CTL0356 440149 - 439688 - | hypothetical protein TERM 605 439899 - 439880 - G 70 -7.2 -3.885 | ACGTTTAGATAAGAA GGACCTTT TAAT AAAAGTCC ACGGGGAAATTTCTT TERM 606 440182 - 440230 + H 91 -12.8 -3.16564 | gap 1, opp_overlap 440203, overlap 440188 AAAAAGAGGGAGTAT GCCAAAGCTTATTGATT-AGAAC AAGG GCTCTTGATTAATAAGCTTTGGC TTCGTAGGATGAGGG TERM 607 440701 - 440684 - g 95 -5.5 -5.89827 | opp_overlap 440693 AAGGATCAAAAAAAA CCTTCGA CTTC TCGAGGG GAGATGCTTTCAGGT CTL0357 440285 - 440746 + | hypothetical protein CTL0358 440781 - 441677 + | hypothetical protein fabI 442563 - 441667 - | enoyl-(acyl carrier protein) reductase TERM 608 443397 - 443413 + G 81 -9.5 -3.78436 | opp_overlap 443388 CTAATAGGCGATGCC GTTGATG GAA CATCAAC TTCTTCATCTCCATT CTL0360 442875 - 444845 + | hypothetical protein TERM 609 444942 - 444903 - T 79 -10 -3.48593 | gap 1, opp_overlap 444904, overlap 444904 444906 GAGGGCTTTATATAA TGAGACCGAGCTTCC-CAT TCT AAGCGGAGGCTCGGTCTCT TTTTTGTATCGGATT TERM 610 444904 - 444941 + T 100 -15.7 -5.37043 | gap 1, opp_overlap 444903 444904 444906 AGGGCTTTATATAAT GAGACCGAGCTTCC-CAT TCT AAGCGGAGGCTCGGTCTC TTTTTTGTATCGGAT TERM 611 444941 - 444904 - T 91 -13.5 -2.68942 | gap 1, opp_overlap 444904, overlap 444903 444906 AGGGCTTTATATAAT GAGACCGAGCTTCC-CAT TCT AAGCGGAGGCTCGGTCTC TTTTTTGTATCGGAT TERM 612 444939 - 444906 - T 76 -10.3 -2.88822 | gap 1, opp_overlap 444904, overlap 444904 444903 GGCTTTATATAATGA GACCGAGCTTCC-CAT TCT AAGCGGAGGCTCGGTC TCTTTTTTGTATCGG CTL0361 445869 - 445045 - | tRNA pseudouridine synthase A TERM 613 446322 - 446300 - g 70 -9.2 -2.87211 | opp_overlap 446299 446300 ATTGGGTCTTATACA GCAAATGCTA TCC TTGCATTTGC ATTTAAGCAAAAAAA CTL0362 445916 - 447022 + | putative DNA glycosylase TERM 614 447052 - 447066 + F 85 -2.8 -5.71712 | overlap 447053 TAGTCTTTTTTCGAC TCTTTG CAG CAGAGG TTTTTTTATATGAAC CTL0363 447076 - 447831 + | hypothetical protein CTL0364 448632 - 447844 - | hypothetical protein TERM 615 448413 - 448391 - G 76 -9.2 -3.40878 | opp_overlap 448389, overlap 448389 ATCATGGTAACAATA GAGTACTTGA GAC TCACGTACTC AATTTCTACCGCATA TERM 616 448729 - 448704 - R 100 -11.2 -5.86332 | GGAATCTAAAAAAAA GCCTCGTTCC TTTTGG GAAACGAGGC TCGAAGAATCTATTT hsp60_1 450395 - 448761 - | chaperonin GroEL groES 450742 - 450434 - | co-chaperonin GroES TERM 617 450878 - 450902 + r 88 -9.4 -4.6526 | TTTTTGCAACTGGTT TAGCAGTTGG CATGA TCAACTGCTA TTTTTAAAAATTTAT pepF 452740 - 450914 - | oligoendopeptidase F TERM 618 452325 - 452347 + g 72 -9.2 -3.14132 | TCCTGAAGTTCGGGA GAGGCTAATA GCA TATTAGCCAC TTGCTGAGGGAGGGC TERM 619 454748 - 454762 + G 75 -8.6 -3.76373 | opp_overlap 454748 454747 454743 GTCTTTAGAAGAAAG GGTTGT CGG ACAACC TTTCGCTATTGCCGC TERM 620 454880 - 454902 + G 82 -5.7 -4.93877 | gap 1, opp_overlap 454880 AGTAGGGAAAACTGA GCT-TGCTAA AGCA TTAGCAGAGC TTTTATTTAATAAGG clpB 453042 - 455645 + | chaperone-protease ClpB TERM 621 455962 - 455989 + G 76 -7.8 -4.08939 | opp_overlap 455961, overlap 455983 AAATCGGAGGAAGAG CTCTTTGCAAAA TTGA TTTTGCCAAGGG TTTCTCTAGGTGTTC TERM 622 456003 - 456017 + G 71 -8.6 -3.54307 | GGTTTCTCTAGGTGT TCATCG GGA CGATGA TTTAGCGAGAGTGTT CTL0369 455671 - 457131 + | hypothetical protein incD 457317 - 457799 + | inclusion membrane protein D incE 457866 - 458264 + | inclusion membrane protein E incF 458269 - 458583 + | inclusion membrane protein F incG 458670 - 459173 + | inclusion membrane protein G TERM 623 459219 - 459202 - T 91 -11.3 -4.72272 | opp_overlap 459202 TTCGCGTAGGAAAAA GAGGAGG GAGA CCTCCTC TTTTTTTTTATTTTG TERM 624 459202 - 459219 + T 100 -11.3 -6.55664 | opp_overlap 459202 TTCGCGTAGGAAAAA GAGGAGG GAGA CCTCCTC TTTTTTTTTATTTTG TERM 625 459347 - 459330 - T 89 -9.9 -4.62069 | opp_overlap 459330 TTTGCATTGCAAAAA GCTCCTA AGAC TAGGAGC TTTTTGTAGAGGGTG TERM 626 459330 - 459347 + T 91 -9.9 -4.83615 | opp_overlap 459330 TTTGCATTGCAAAAA GCTCCTA AGAC TAGGAGC TTTTTGTAGAGGGTG incA 460080 - 459340 - | inclusion membrane protein A TERM 627 459647 - 459665 + g 70 -6 -4.39329 | TCTGCTATGATTTCT TGCGAAAA GAG TTTGCGCA TTTCTTCTGTAGAGT CTL0375 460482 - 460207 - | hypothetical protein TERM 628 460467 - 460449 - G 71 -9.6 -3.00544 | GAAAAGGAGGATAGA GGGAAACT CTT AGTTCCCC AAAAATAATTGCCAT araD 460581 - 461267 + | ribulose-phosphate 3-epimerase TERM 629 461375 - 461350 - g 93 -9.1 -4.49556 | overlap 461351 GTCTCAGGAAACAAA GGGGATACTTT TATT AAAGTATCCCT GCAGGCCGCTGGATC TERM 630 461374 - 461351 - g 95 -12.6 -3.29252 | overlap 461350 TCTCAGGAAACAAAG GGGATACTTT TATT AAAGTATCCC TGCAGGCCGCTGGAT TERM 631 461453 - 461439 - g 78 -10 -3.41302 | overlap 461437 GCAAGAGGTCAAAGA GGCTCA GTT TGAGCC AAGAAATTTAGAGTA TERM 632 461594 - 461611 + G 79 -3.4 -5.37043 | overlap 461596 TTACCGTCTTTGCTT TAGTGC ATGAAG GCACTG TTTTTTCTATGGAGT efp 461254 - 461811 + | elongation factor P TERM 633 461951 - 461973 + G 72 -7.8 -3.84284 | overlap 461942 CAAGTATTCAGGAGC CAGTCTTTTA TGA TAACAGACTG TTTGCTGGATTTTCC accB 461824 - 462318 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 634 463293 - 463279 - g 70 -2.8 -4.91712 | overlap 463280 GCTAAGGGAGAAAAA CTGCCT TGG AAGCAA AAGAATATAGAGTTT accC 462322 - 463695 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 635 463675 - 463698 + F 100 -2.4 -6.19302 | opp_overlap 463677 463678, overlap 463677 463678 GGTAGCACCTTTTTA AATTTAGCTG ATGG CAGCTAACTA TTTTTTTTATTATGT TERM 636 463677 - 463696 + F 72 -5 -4.71468 | opp_overlap 463677 463678, overlap 463675 463678 TAGCACCTTTTTAAA TTTAGCTG ATGG CAGCTAAC TATTTTTTTTATTAT TERM 637 463678 - 463695 + F 71 -8.5 -3.39221 | opp_overlap 463677 463678, overlap 463677 463675 AGCACCTTTTTAAAT TTAGCTG ATGG CAGCTAA CTATTTTTTTTATTA rplM 463918 - 464370 + | 50S ribosomal protein L13 rpsI 464396 - 464785 + | 30S ribosomal protein S9 TERM 638 464818 - 464851 + T 100 -14.1 -4.56597 | opp_overlap 464825 464842, overlap 464812 464820 464825 TATTGGAGTGCGTTT CAGAAAAGCCTTCTT TCAA AAGAAGGCTTTTCTA TTTTTAGGAACGCCA TERM 639 464820 - 464849 + T 100 -16.7 -3.90048 | opp_overlap 464825 464842, overlap 464812 464818 464825 TTGGAGTGCGTTTCA GAAAAGCCTTCTT TCAA AAGAAGGCTTTTC TATTTTTAGGAACGC TERM 640 464844 - 464825 - T 90 -10.8 -4.36914 | opp_overlap 464812 464820 464818 464825, overlap 464842 GTGCGTTTCAGAAAA GCCTTCTT TCAA AAGAAGGC TTTTCTATTTTTAGG TERM 641 464825 - 464844 + T 93 -10.8 -4.98672 | opp_overlap 464825 464842, overlap 464812 464820 464818 GTGCGTTTCAGAAAA GCCTTCTT TCAA AAGAAGGC TTTTCTATTTTTAGG CTL0382 465684 - 464833 - | chitinase TERM 642 464966 - 464996 + g 79 -7.7 -4.30844 | gap 1 ACTTTCCCTATTTTT TC-CGCAGCATGAA TGAA TTCATGCTCCGAGA TTTTCATCATAACAT TERM 643 465275 - 465263 - G 72 -6.3 -4.27211 | overlap 465258 GCGAAAGAAACTAAA TCTCT TAG AGAGA ATGAAGAATTTAAAA TERM 644 465740 - 465713 - R 71 -6.4 -4.05389 | opp_overlap 465715, overlap 465715 TAGAGACATCACAAA GAGGACTAAAAA GAGG TTCTTAGTCCTT GTTGAACGCGACTAT TERM 645 465738 - 465715 - R 74 -9 -3.61175 | opp_overlap 465715, overlap 465713 GAGACATCACAAAGA GGACTAAAAA GAGG TTCTTAGTCC TTGTTGAACGCGACT adk 466517 - 465780 - | adenylate kinase CTL0384 466724 - 467368 + | putative ABC-membrane transport protein, inner membrane component CTL0385 467365 - 468066 + | ABC transporter, ATP-binding component TERM 646 468098 - 468086 - T 72 -7.7 -3.85817 | ATTCTGTTTCAGAAA CTTCC CAC GGAAG AGGAGAGACTGTTTG CTL0386 471485 - 468069 - | hypothetical protein TERM 647 469240 - 469252 + g 91 -4.8 -5.71712 | opp_overlap 469238 469240 GATAATAGAGAGAGA CAGG AATAG CCTG TTTTTTTATCTAAGC TERM 648 469394 - 469418 + g 75 -7.2 -4.24342 | ATTGTAATGATCCAT GAGTTTTCTC AGTCA GAGACAACTC TTTATTCATAACAAA TERM 649 469446 - 469435 - G 78 -5.8 -4.79352 | opp_overlap 469435 TTATTCATAACAAAA CGGA AGTC TCCG GTAAGAGCATCCGTT TERM 650 471255 - 471280 + g 80 -2.5 -5.4477 | AGCAAATATTTCAGA TTCGGAGTCGA TTCC TCGGATGCGAA TTTTTTTAGCCGTTT CTL0387 472759 - 471482 - | hypothetical protein TERM 651 471669 - 471685 + g 72 -6.5 -4.33258 | opp_overlap 471672, overlap 471672 TTCGCAATGTTATGA GAAGGCT TAT AGCCCTC TTTGTATTTAAGAAT TERM 652 472218 - 472206 - G 95 -7.7 -5.11389 | ACAATATAAATAAAA GCCAT GGA ATGGC TGAAACTAAATAGTT CTL0388 473641 - 472838 - | putative methyltransferase TERM 653 472906 - 472876 - G 95 -7.6 -5.06472 | opp_overlap 472884 AGATAAACAAGAAAA GCGGAAACTCCTTG CGA CAAAGATTTTCTGC TCGAGCCCTCTTCCC TERM 654 472915 - 472927 + g 74 -4.1 -5.00884 | overlap 472913 472915 TTTCTGCTCGAGCCC TCTTC CCT GAGGA TTTTTTAGGGGAGAT CTL0389 474097 - 474510 + | hypothetical protein TERM 655 474692 - 474707 + G 76 -6.8 -4.48449 | TAACACCAGTGGTAT GCTCTC CAAT GGGAGC TTTCTGTTTTGCTCA TERM 656 475245 - 475263 + G 81 -5.2 -5.10461 | overlap 475247 CTGTGCTTTATTAGC TTCTGCGG TAA TCGCAGCA TTTTTCTTAGGTGCA CTL0390 474568 - 475650 + | hypothetical protein CTL0391 475740 - 476459 + | putative phospholipase-carboxylesterase family protein CTL0392 476478 - 477323 + | hypothetical protein TERM 657 477457 - 477474 + G 74 -4.2 -4.93877 | TGCACCACATTAGAT GAACAA AACCAA TTGTTC TTTTCTTTAATAGAG CTL0393 477301 - 478248 + | microsomal dipeptidase oppA 479525 - 478245 - | oligopeptide transport system binding protein TERM 658 479282 - 479272 - G 75 -3.2 -5.1244 | TTACGAATACAAAAA CGAT AAA ACCG CCCGTCTTCCGAAAT TERM 659 479663 - 479627 - H 79 -8.9 -3.8917 | opp_overlap 479626 479624 479659, overlap 479628 GCGGAAGTATAATAA CTTTCGGAGAAAAATAC ACA GTATTTTTCGCTGAAAA GAATGCTTTTCTCGT TERM 660 479662 - 479628 - H 75 -10.2 -2.9302 | opp_overlap 479626 479624 479659, overlap 479627 CGGAAGTATAATAAC TTTCGGAGAAAAATAC ACA GTATTTTTCGCTGAAA AGAATGCTTTTCTCG CTL0395 479701 - 480387 + | exported protein CTL0396 480571 - 481017 + | protein translocase TERM 661 481293 - 481310 + F 100 -9.1 -5.70829 | TCGGTTGTTTGCGAA GCTTGGG TTCT CCCAGGC TTTTTTTATGCTCTT TERM 662 481564 - 481546 - g 71 -6.8 -4.17316 | opp_overlap 481548 ATTTCCGCAAAAGAA TCCTTTTC TGT GAAAAGAA AGGTTGATGTGAATG TERM 663 482209 - 482231 + G 100 -12.1 -4.45771 | opp_overlap 482208 AAGGGCGGAGACTAT GTGGACAAG TCCGC CTTGTCCAC TTTATATTTTGGAGT CTL0397 481417 - 482274 + | hypothetical protein CTL0398 482276 - 483118 + | hypothetical protein CTL0399 483118 - 483984 + | hypothetical protein TERM 664 484006 - 484031 + F 83 -9.8 -3.88001 | TCTTTTCTATTTACA CCGCTTAGCT TGCTTT AGTTAAGCGG TTCCTTTTTATCAAA pkn1 484170 - 486014 + | serine-threonine-protein kinase TERM 665 487857 - 487842 - g 76 -10.4 -2.94705 | overlap 487837 GAGAACGCAAGCAGA GGAGCG TATC CGCTCC CTAGGGGGGAAAGTG TERM 666 487897 - 487870 - g 71 -8.4 -3.55444 | overlap 487871 487874 TCCCTAGGGGGGAAA GTGAGCTCTTCG GTAT CGAAGAGCACAT ATGCCGTCATAGCGG TERM 667 487896 - 487871 - g 83 -11.9 -2.73124 | overlap 487870 487874 CCCTAGGGGGGAAAG TGAGCTCTTCG GTAT CGAAGAGCACA TATGCCGTCATAGCG TERM 668 487893 - 487874 - g 83 -12.2 -2.64472 | overlap 487871 487870 TAGGGGGGAAAGTGA GCTCTTCG GTAT CGAAGAGC ACATATGCCGTCATA dnlJ 486025 - 488016 + | NAD-dependent DNA ligase LigA TERM 669 489231 - 489220 - g 82 -3 -5.49568 | AATCCAAAACAAAAA TCTT GATC AAGA CTCTCTACGAAAACT TERM 670 490231 - 490209 - g 71 -4.2 -4.78077 | opp_overlap 490209 TTCAAGCAAAAGAAA CCTTGTTAGA GGC TTTAACAAAG GGCGAACAGCCTTCT TERM 671 490970 - 490980 + G 71 -6.8 -4.183 | GCAGAATTACGGGTA GCTG AAG CAGC TTTATTAGGAGTTCA TERM 672 491597 - 491585 - g 71 -4.1 -4.82678 | CTACAAAAAGTAAAA GCTCT GCT AGAAC TAAATATGTGTTTAG TERM 673 491687 - 491652 - g 71 -8.4 -3.4149 | gap 1 ATTCAAGGCTAAAGA GAGAGGTTTTCGAAGCA TCT TGCT-CTAACACCTCTC AGCAACTTCTTCAAT CTL0402 488114 - 492463 + | putative integral membrane protein TERM 674 492488 - 492469 - T 100 -5.7 -6.01369 | gap 1, opp_overlap 492470 492472, overlap 492470 GAAAGAATAAAAAAA GGAGGGCT GCTAA AGCCC-CC TTTTTAGTTAGGATA TERM 675 492488 - 492470 - T 79 -8.1 -4.17161 | opp_overlap 492470 492472, overlap 492469 AAAGAATAAAAAAAG GAGGGCT GCTAA AGCCCCC TTTTTAGTTAGGATA TERM 676 492470 - 492488 + T 79 -5.9 -4.87291 | opp_overlap 492469 492470, overlap 492472 AAAGAATAAAAAAAG GAGGGCT GCTAA AGCCCCC TTTTTAGTTAGGATA mhpA 494049 - 492526 - | FAD-dependent monooxygenase TERM 677 492901 - 492952 + g 80 -11.6 -2.71681 | gap 1 ATCACTAGCTTCATA TTTCGATGC-GCGGTGGGAGGGATA GTA TAGCTCTCCTTCCGCAGCATCGAGC TGCTTACACCCCTTA TERM 678 494233 - 494212 - R 100 -14.5 -4.7033 | opp_overlap 494216 TAATGGAAGAGAAAA GAGAGGCTG AACC CAGCCTCTC TACGAAAACAAACTA CTL0404 495196 - 494249 - | hypothetical protein TERM 679 495239 - 495225 - H 86 -8.6 -4.57569 | opp_overlap 495225 495224 TTATTTTTTCAAAAA GCTTCT AAA AGAAGC GTTGATTTCTGCATA rpmG 495595 - 495753 + | 50S ribosomal protein L33 TERM 680 495853 - 495835 - g 71 -4.6 -4.67234 | ATCTAATTCCAAAAA GAAAAAGA CTT TCCTCTTC CATAGTTTCTGCTTT TERM 681 496811 - 496826 + G 70 -2.6 -5.04385 | TTGGGAAATCTCTTC CTTATA TGAT TATGAG TTTTTTAAGCCTATC TERM 682 497096 - 497080 - g 72 -9.5 -3.15544 | opp_overlap 497079 497080 TTTTAGCTGCATTAA CCCTAAA AAA TTTAGGG GTTTTGACGCATTGG TERM 683 497080 - 497096 + G 71 -9.5 -3.06569 | opp_overlap 497080, overlap 497079 TTTTAGCTGCATTAA CCCTAAA AAA TTTAGGG GTTTTGACGCATTGG CTL0406 495789 - 497300 + | lipoprotein releasing systen, inner membrane component TERM 684 497963 - 497931 - g 100 -14.9 -4.17023 | opp_overlap 497930 GGAACTAGCTGAAAA GTGCCACCGAGAAGA GAT TCTCCGCGATGGCAC CTTAATGCAGCGACA CTL0407 497305 - 497982 + | lipoprotein release ATP-binding component CTL0408 500565 - 498133 - | MAC/perforin family protein TERM 685 500255 - 500265 + g 71 -6.8 -4.18042 | ATTTCTTCTAGGAGC TCCG CAT CGGA TTTCATTTGTATAGA TERM 686 502254 - 502278 + r 100 -15.1 -3.59979 | opp_overlap 502259, overlap 502259 TAGATGCTTTCCTCT GAGAAGGCAGG AAA CTTGCCTTCTC TTTCGACTACAAAAC TERM 687 502259 - 502273 + r 72 -7.8 -3.82946 | opp_overlap 502259, overlap 502254 GCTTTCCTCTGAGAA GGCAGG AAA CTTGCC TTCTCTTTCGACTAC CTL0411 503240 - 502302 - | phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein CTL0413 504959 - 503754 - | phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein TERM 688 505249 - 505225 - R 81 -10.1 -3.71998 | opp_overlap 505217 GATGGATGAAGATAA GGTCTTCTATA TTG TATTGAAGACC TCGGACAGTCCAGTT TERM 689 506801 - 506779 - R 82 -9.2 -4.04206 | CTATTGTGAGAGAAA GAGGCAGA GGGATGG TCTGCCTC CGAGAGAACTTAGAA TERM 690 506923 - 506936 + r 76 -5.3 -5.00467 | TTTCTTTAGCTATAT CTTGA CAGA TCAAG TTTTCTTCTTCTTGA CTL0417 508052 - 507306 - | hypothetical protein TERM 691 508111 - 508121 + H 79 -8.2 -4.07687 | opp_overlap 508100, overlap 508100 GAAAGCGACCTTAGC CGCG TTT CGCG TTTTAACAAAACGAT CTL0419 508663 - 510192 + | hypothetical protein CTL0419A 510245 - 510505 + | hypothetical protein trpR 511407 - 511691 + | Trp operon repressor TERM 692 511826 - 511810 - f 78 -9.5 -3.6608 | opp_overlap 511810 AGCATGCCATGCAAA TCAGCTT TTC AAGCTGA TTGCTTCCAAGATAT TERM 693 511810 - 511826 + F 75 -9.5 -3.34522 | opp_overlap 511810 AGCATGCCATGCAAA TCAGCTT TTC AAGCTGA TTGCTTCCAAGATAT TERM 694 511865 - 511893 + F 73 -8.2 -3.59946 | gap 1 TCATCCTCTTACAGC GTGCCTGGCTTTC TTTT GAAAGCT-GGCGC TTATCTACTTGGCGA TERM 695 511944 - 511969 + F 76 -5.5 -5.00884 | TTTATTTGATTAAGA GATGTTCTTAT AGAA GTAAGAGCGTC TTTTTTGCGCAGGAT TERM 696 512058 - 512039 - f 72 -5.8 -4.42653 | opp_overlap 512039 ATTTTATGGAGAAAA GATGTTCA AACA TAAACATC CTTTTGGGGGAGCGT trpB 512040 - 513218 + | tryptophan synthase subunit beta TERM 697 513339 - 513353 + G 70 -2.8 -4.93898 | AGGTGTTGATATTCT GGAACT AGG ATTTCC TTTTTCTGATCCTGT TERM 698 513603 - 513618 + G 71 -3.2 -5.04987 | opp_overlap 513603 513613, overlap 513604 AGCACCTTTATCACA CGGAGA AAAA TCTCCA TTTTTTGAAGATCTT TERM 699 513641 - 513655 + G 81 -7.2 -4.64613 | AAGATCTTTTAGCTG TAGGAT TGG ATCCTA TTTTGCTTATTTCTG trpA 513211 - 513972 + | tryptophan synthase subunit alpha TERM 700 513986 - 514021 + T 80 -9.8 -3.65314 | opp_overlap 513987 513993, overlap 513987 513989 AATTTATGAATATGA ATATGAAGCCCAGGCA TCGA TATCTGGGCTTCATAG TTGTCTGTATAGATT TERM 701 514020 - 513987 - T 100 -13.3 -3.39717 | opp_overlap 513987 513986 513989, overlap 513993 ATTTATGAATATGAA TATGAAGCCCAGGCA TCGA TATCTGGGCTTCATA GTTGTCTGTATAGAT TERM 702 513987 - 514020 + T 93 -13.3 -2.78465 | opp_overlap 513987 513993, overlap 513986 513989 ATTTATGAATATGAA TATGAAGCCCAGGCA TCGA TATCTGGGCTTCATA GTTGTCTGTATAGAT TERM 703 513989 - 514018 + T 82 -11.5 -2.93455 | opp_overlap 513987 513993, overlap 513987 513986 TTATGAATATGAATA TGAAGCCCAGGCA TCGA TATCTGGGCTTCA TAGTTGTCTGTATAG TERM 704 514115 - 514102 - T 77 -5.9 -4.82901 | opp_overlap 514102 TGTTTTTTATAAAAA GCCCC TTAC GAGGC TTCTCTTTTCGAACA CTL0425 514684 - 514163 - | hypothetical protein TERM 705 514447 - 514460 + g 72 -8.1 -3.90048 | overlap 514450 ATAACGTCATTGCTT GCTCG GCTT CGAGC TGTTTTTGCAACAAA TERM 706 514450 - 514462 + g 70 -5.5 -4.56597 | overlap 514447 ACGTCATTGCTTGCT CGGCT TCG AGCTG TTTTTGCAACAAAGC CTL0426 514916 - 514761 - | hypothetical protein TERM 707 516086 - 516096 + G 82 -6.8 -4.86731 | TAGTTGGGTTACCCT GGAG CTC CTCC TTTTCTTTAGAAGAA TERM 708 516131 - 516120 - g 71 -4.4 -4.79953 | AGAAGAACAAAGAAA TCTC CCTA GAGA AAAATTATTTGATTA oppA2 515293 - 516882 + | oligopeptide transport system binding protein dsbB 517316 - 516909 - | putative disulfide oxidoreductase dsbG 518029 - 517313 - | disulfide bond chaperone CTL0430 518175 - 519389 + | putative integral membrane protein CTL0431 519903 - 519391 - | hypothetical protein CTL0432 520739 - 520047 - | ABC transporter, ATP-binding protein CTL0433 521757 - 521047 - | hypothetical protein TERM 709 521800 - 521811 + H 89 -5.8 -5.55769 | opp_overlap 521800 GTTACTTTATGATAA CCTC GCAT GAGG TTTTTTGTTATAAGA TERM 710 522677 - 522690 + G 70 -5.3 -4.431 | CATATTGGTGTTTAT GCTTT TAGA AAAGC TTTTCTAAGTGAATA kdsB 522125 - 522889 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 711 524375 - 524385 + G 71 -4 -4.8543 | TGCTTGGCGTACAGT TTCA TCC TGAA TTTTTATCAAAATTA pyrG 522865 - 524484 + | CTP synthetase CTL0436 524471 - 524917 + | Holliday junction resolvase-like protein TERM 712 524925 - 524939 + F 89 -10 -4.36914 | TATACTAGGACCCCT CATGGC AAA GCCATG TTTTATGAGAGAGAA zwf 525034 - 526557 + | glucose-6-phosphate 1-dehydrogenase devB 526582 - 527352 + | 6-phosphogluconolactonase dnaX 528221 - 527349 - | DNA polymerase III subunit delta' tdk 528846 - 528235 - | thymidylate kinase TERM 713 528791 - 528779 - G 70 -7.7 -3.72576 | opp_overlap 528779 528778 CCTTCTTCTATTAAA CGCTT AGA AAGCG CTTGTATAAACTGAG gyrA 531358 - 528848 - | DNA gyrase subunit A gyrB2 533787 - 531373 - | DNA gyrase subunit B TERM 714 531925 - 531899 - G 100 -11.6 -4.2586 | GGATAGTAATACAAA GGATAAGCTCCG TCT CGGAACATATCC AAGAATTCAGAAAAT TERM 715 532687 - 532672 - G 71 -3.2 -5.00884 | opp_overlap 532673, overlap 532673 ATTTTCTTCAAAAAA TGTGGT TAAC ACCTCA CCACTAATTTGCTGA TERM 716 533176 - 533157 - G 71 -5 -4.59773 | opp_overlap 533160, overlap 533160 GGTCATCTTCAAAAA CAATCGTG GCTC CACGATTT AAAAATGCTAATTCT TERM 717 533173 - 533160 - G 76 -6.7 -4.41633 | opp_overlap 533160, overlap 533157 CATCTTCAAAAACAA TCGTG GCTC CACGA TTTAAAAATGCTAAT CTL0443 534140 - 533790 - | hypothetical protein CTL0444 534982 - 534287 - | hypothetical protein TERM 718 534503 - 534526 + g 71 -8.2 -3.54543 | opp_overlap 534505 534507 TTTGACTAGTTCAAC TACATGGCTG CCCA CAGCGATGTA TTTAGGAACATGACT TERM 719 534876 - 534862 - G 72 -6.4 -4.32048 | overlap 534863 CAACAATAGCCAAAA CTGTGC CCA GCACAA ATAAAGCTAACGAGA tgt 536204 - 535086 - | queuine tRNA-ribosyltransferase TERM 720 535829 - 535854 + g 74 -7.7 -3.98747 | overlap 535832 ATTTAAAGTGTACCC CGTCATCATTA ACTT TAATGATGGTG TTTCCTCCTTTTTTC TERM 721 536154 - 536165 + g 86 -3 -5.65513 | CTCTATCCGACCTAC TCTA GCCC TAGA TTTTTTTGATTGATG TERM 722 536323 - 536297 - R 93 -10.2 -5.14477 | opp_overlap 536300 GACATAGTGAAAAAA GCCCGAAGAAAA CCT TTGTCTTCGGAC TCACCCACTATTTGA mgtE 537743 - 536331 - | magnesium transport protein TERM 723 537308 - 537294 - G 81 -4.3 -5.30575 | TAAAAAGGCAAAAAA CTCAT TGGTC ATGAG TCGCCCAGCTGTATT TERM 724 537943 - 537932 - R 75 -4.4 -5.09245 | opp_overlap 537932 537940 CGAAAACGACAAAAA GTCT TCCG AGAC TCTTAAACAAGAGTC TERM 725 538157 - 538175 + r 81 -10.4 -3.57144 | opp_overlap 538150 538148 GCAAAATCGCTTTAC CTGCTAAA AAC TTTAGCAG TTTAAAACTAAAAGC CTL0447 539274 - 538183 - | putative integral membrane protein CTL0448 539500 - 539820 + | hypothetical protein gcp 539896 - 540912 + | O-sialoglycoprotein endopeptidase TERM 726 541101 - 541090 - gf 70 -5.8 -4.31433 | opp_overlap 541093 GATTGGTACAAGAAA CTCC TTCT GGAG AAGTCTTCCCTGCTT TERM 727 542340 - 542318 - gf 78 -5.6 -4.87328 | overlap 542311 CATAGAAAGACAAAA CGTCATAGAA CCC CTCTATCACG ACGTGTTCCATTATA oppA3 540876 - 542432 + | oligopeptide transport system binding protein oppB 542591 - 543532 + | oligopeptide transport system membrane permease oppC 543564 - 544409 + | oligopeptide transport system membrane permease oppD 544402 - 545235 + | oligopeptide transport system ATP-binding protein oppF 545250 - 545993 + | oligopeptide transport system ATP-binding protein TERM 728 546839 - 546857 + G 82 -4.6 -5.36965 | overlap 546841 546850 GTTGCTTCCATTTGC GCTCTTTA TCC TAAAGAAC TTTTTTATCCTATTA CTL0455 546305 - 547054 + | hypothetical protein TERM 729 548349 - 548367 + G 75 -8.8 -3.61609 | opp_overlap 548346 548349 AGGACTCACACACTA CGGATCTG GTC CAGCTCCG TTATACTTTGGATCC CTL0456 547084 - 548499 + | sodium:sulfate symporter TERM 730 548570 - 548591 + G 76 -10.9 -2.64293 | overlap 548569 548566 548572 ACGCCTTCTTTGTGT CGGGAGCTT CAAA AAGCTCCTG CTCTTCTATTAACAG TERM 731 548572 - 548589 + G 72 -9.9 -2.85947 | overlap 548570 548569 548566 GCCTTCTTTGTGTCG GGAGCTT CAAA AAGCTCC TGCTCTTCTATTAAC TERM 732 550072 - 550101 + G 73 -5.7 -4.4352 | ACAAATACATTCTCC GGAGGATGCTCAT TCTG ATGATTTTCCTCC TTTAATTTTGTTTTT pfkA 548519 - 550180 + | diphosphate--fructose-6-phosphate 1-phosphotransferase CTL0458 550189 - 551037 + | hypothetical protein pfkA_2 551019 - 552665 + | diphosphate--fructose-6-phosphate 1-phosphotransferase TERM 733 552686 - 552671 - T 74 -5.4 -4.70613 | AAAATTCTAAGAAAA CAACAG GAAA CTGTCG GTGAAAGCTAGAAGA gseA 554206 - 552911 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 734 553155 - 553172 + g 72 -9.9 -2.83905 | opp_overlap 553153 553152 CCAAACATAAGAGGC GCCTCTT TTTG AAGAGGC TCTAATAAATTATGC leuS 556662 - 554203 - | leucyl-tRNA synthetase TERM 735 554718 - 554705 - G 75 -5.3 -4.86001 | ACCATTTCATAAAAA CGATT CAAA AATCG TCTGCAACCAGCAAC TERM 736 554735 - 554751 + g 70 -2.9 -5.01422 | overlap 554737 CTGCAACCAGCAACT CCTTGGT TAG ACCAGAG TTTATTTTTATCTAA TERM 737 555102 - 555072 - G 80 -9 -3.91473 | overlap 555076 AGAAACGCGCATAAA GTAAGTGCAGTACA GCA TGTTCTGCACCTCC AATATACAGATCTAC TERM 738 555098 - 555076 - G 82 -10.6 -3.60798 | overlap 555072 ACGCGCATAAAGTAA GTGCAGTACA GCA TGTTCTGCAC CTCCAATATACAGAT TERM 739 556965 - 556976 + G 82 -5.8 -4.93318 | CTATAGTAGCTCGTG CCTC TAAA GAGG TTTTTATAGATTCTC TERM 740 557728 - 557712 - g 70 -3.7 -4.87291 | opp_overlap 557712, overlap 557714 CACCCGAAGGAAAAA TCTTCCA AGC TGGAACA CTTTCAGGAAATCCT TERM 741 557891 - 557905 + G 75 -2.1 -5.27335 | ACATTGGTGCGATAT GGAAG CCTCT TTTCC TTTTTCTTTAACCCA hemL 556859 - 558127 + | glutamate-1-semialdehyde aminotransferase CTL0463 558688 - 558119 - | hypothetical protein TERM 742 558188 - 558165 - G 73 -6 -4.51197 | overlap 558166 GATAACGAAGCAAAA CGCCCTCCAA GATG TTGGAGAACA TCGGACCACATTCTT TERM 743 558380 - 558369 - G 85 -4.4 -5.50723 | overlap 558371 CCAGCAAAAGAAAAA TCTC CTCC GAGA AATACGGACGGACAA CTL0464 559154 - 558708 - | hypothetical protein rpiA 559872 - 559144 - | ribose-5-phosphate isomerase A CTL0466 561610 - 559967 - | hypothetical protein TERM 744 560808 - 560829 + g 71 -8.8 -3.24924 | overlap 560806 TCTTTCAAGTCTTTA CTCACCAA AATCCC TTGGTGAG TCTTCTCAATCAAAG TERM 745 561303 - 561287 - G 73 -7.3 -4.11394 | AGGTGACTCCGAAAA GTGATCT TGC AGACCAC TACTCAAGAATTTAA TERM 746 561488 - 561470 - G 85 -9.6 -4.12474 | overlap 561457 AAGCAACAATAATAA TGCTGCAG CTG CTACAGCA GAGACTAACCCTATA TERM 747 561840 - 561871 + H 79 -5.1 -5.2696 | gap 1, overlap 561841 AGACAATCTGCCATG TCGCATC-CGCTCT GACGG AGAGCGTGTTGCGC TTTTTTGGGTTTTCA TERM 748 561841 - 561870 + H 76 -8.6 -3.74549 | gap 1, overlap 561840 GACAATCTGCCATGT CGCATC-CGCTCT GACGG AGAGCGTGTTGCG CTTTTTTGGGTTTTC TERM 749 562001 - 561986 - g 91 -4.7 -5.60993 | opp_overlap 561986 TGTGTTATAAAAAAA GAAGC TTTAAC GCTTC CTTCTGGAGACTTCG dhnA 561914 - 562960 + | fructose-bisphosphate aldolase TERM 750 564141 - 564129 - g 73 -5.5 -4.64676 | opp_overlap 564134 GTACTCCGAATAAAA GAGCC TAA AGCTC AAAGACTTTATTCTG xasA 562974 - 564374 + | glutamate/gamma-aminobutyrate antiporter TERM 751 564388 - 564416 + F 79 -9 -3.89614 | overlap 564393 AAATTCTTTTGCACA GAAAAGGGCTTT GTAAA GAAGCTCTTTTC TTTCTAAGACTTACC TERM 752 564868 - 564852 - g 72 -7.9 -3.74077 | TTTGATACAGCTAAA GCGGTAG GAG CGACCGC TGTCGCATTCGGACA CTL0469 564468 - 565232 + | hypothetical protein surE 565363 - 566214 + | stationary phase survival protein SurE TERM 753 566221 - 566246 + F 83 -7 -5.00616 | CTGGCTTAGTTATCT GTATGTTGAA ACGAAC TTCAACGTAC TTTTTTCAGCAAGAA ubiA 566326 - 567234 + | prenyltransferase CTL0472 567231 - 567809 + | aromatic acid decarboxylase TERM 754 567795 - 567821 + T 86 -9.5 -4.50193 | gap 1, opp_overlap 567793 567790 567800 CTTATAAAAAGATGG GAGAACC-CCCG CTAA TGGGAGGTTCTC TTTTCGTTGATTACT CTL0473 568702 - 567806 - | hypothetical protein TERM 755 568433 - 568412 - G 82 -6.7 -4.75219 | opp_overlap 568417 TAACCAGCAAGAAAA GATAATAAC CGCA GTTATCATC TGTACAACGAAGTAC TERM 756 568585 - 568553 - G 80 -9.9 -3.61902 | overlap 568561 TGCTATCATAGATAA CCCAACGATCCCACC ATC GATTAAATCGTTGGG AGCGAGAATCATATG TERM 757 568756 - 568772 + r 74 -10.1 -2.62933 | TCGAACCCGCAACTT CCGCCTT GAC AGGGCGG TGCTCTAACCAGTTG CTL0474 569132 - 568992 - | hypothetical protein CTL0475 569545 - 569159 - | hypothetical protein TERM 758 569672 - 569653 - R 100 -12.2 -6.08563 | opp_overlap 569653 AAGAGAGAAAAAAAA GCCTCTTC ATAA GAAGAGGC TTTTGCTCGGCAAAC TERM 759 569653 - 569672 + r 95 -12.2 -4.25104 | opp_overlap 569653 AAGAGAGAAAAAAAA GCCTCTTC ATAA GAAGAGGC TTTTGCTCGGCAAAC CTL0476 570493 - 569687 - | hypothetical protein CTL0477 571328 - 570885 - | hypothetical protein TERM 760 571393 - 571372 - R 72 -7.4 -3.99481 | opp_overlap 571371, overlap 571367 GTTATCAAAAGAGAA GCTTTTCT CTAAAT AGAAAAGC GTATCGTCAACTCTT CTL0477A 571804 - 571436 - | hypothetical protein CTL0478 572418 - 571903 - | hypothetical protein CTL0479 572948 - 572547 - | hypothetical protein TERM 761 572835 - 572825 - G 78 -5.4 -4.98616 | TTAAAATAGCAAAAA TTCC TAA GGAA ACGGCAAATTCTATA TERM 762 573254 - 573270 + r 70 -2.9 -5.0925 | opp_overlap 573228 573256, overlap 573228 573245 573256 TGGTTAGCGTCTATA GATGCTT TAA GAGCAGC TTTTTCCTTTTCAGC CTL0480 573819 - 573229 - | hypothetical protein TERM 763 573480 - 573455 - G 72 -7.5 -3.95852 | opp_overlap 573455 573460 ATCTTATTAATGAAA GAGACGGAGGC CAAA GCGTCCTTCTC TTCTGAAAGATTACG TERM 764 573905 - 573891 - R 71 -6.4 -4.04209 | GCAAATCACTATAAA TCCGCA ACA TGCAGA ACTAAAGCGCCGTAA CTL0481 574616 - 573969 - | hypothetical protein TERM 765 576058 - 576042 - g 84 -3.7 -5.5604 | overlap 576044 GTAATTAATAAAAAA TTTTCTG AAA CAGAAGA TCTCCCGCCCTGCTC CTL0482 574842 - 576089 + | putative sodium:dicarboxylate symport protein TERM 766 577338 - 577321 - g 73 -8.5 -3.69447 | opp_overlap 577335 577335, overlap 577319 GCATCAAAAAACATA TTGCAGA ATCT TCTGCAA CCATTGCTGCGTTTC CTL0483 576273 - 577745 + | sodium-dependent amino acid transporter TERM 767 578012 - 578022 + G 71 -3.2 -4.92757 | ATCGTTACAGTTTGT GGAG GGT TTCC TTTTCTTCTTGCTGC incB 577850 - 578197 + | inclusion membrane protein B TERM 768 578417 - 578429 + G 82 -10.5 -3.7104 | TAATTTCTCTACATG GGGGC CAG GCCCC TTCTTCACTGTCCCT incC 578274 - 578810 + | inclusion membrane protein C CTL0486 578868 - 581654 + | putative membrane transport protein CTL0487 581683 - 582096 + | Crp family transcriptional regulator TERM 769 582132 - 582102 - T 100 -12.6 -5.85737 | AGATCAATAAAAAAA CCCACAGTTACCTT TGG ATGGGAACTGTGGG CCTAAACTCTTTGTT TERM 770 582134 - 582160 + T 76 -7.4 -4.35461 | opp_overlap 582140, overlap 582140 ATGGGAACTGTGGGC CTAAACTCTTTG TTG CAGAGATTTTAG TTTTGATGCTCTTGG TERM 771 582140 - 582154 + T 72 -5 -4.70319 | opp_overlap 582140, overlap 582134 ACTGTGGGCCTAAAC TCTTTG TTG CAGAGA TTTTAGTTTTGATGC acpP 582390 - 582157 - | acyl carrier protein TERM 772 582528 - 582507 - R 100 -6.7 -5.90981 | CTATAGCAAAAAAAA TCTAGCTTT AAAT AAAACTAGA GTAACCAATCCCTAC fabG 583505 - 582759 - | 3-ketoacyl-(acyl-carrier-protein) reductase fabD 584428 - 583502 - | malonyl-CoA-[acyl-carrier-protein] transacylase fabH 585428 - 584445 - | 3-oxoacyl-(acyl carrier protein) synthase III recR 585566 - 586168 + | recombination protein RecR TERM 773 588579 - 588589 + G 75 -5.4 -4.89477 | opp_overlap 588568 GAAACCACTGTTCGC GGTT ACA AACC TTTTATTATTGGACC CTL0493 586542 - 588920 + | outer membrane protein (variable surface antigen) TERM 774 588958 - 588924 - f 85 -12.3 -2.60212 | opp_overlap 588921 588924 588930, overlap 588930 GGAGTATTCTAGAAT CCGAAAGGAGAAGGA GAGCA TCCTTCTCCTTTCAC CTATTGGTATTTTTT TERM 775 588952 - 588930 - f 90 -12.1 -3.69354 | opp_overlap 588930 588921 588924, overlap 588924 TTCTAGAATCCGAAA GGAGAAGGA GAGCA TCCTTCTCC TTTCACCTATTGGTA TERM 776 588930 - 588952 + F 90 -12.1 -3.67517 | opp_overlap 588924 588930, overlap 588921 588924 TTCTAGAATCCGAAA GGAGAAGGA GAGCA TCCTTCTCC TTTCACCTATTGGTA ompH 588987 - 589508 + | Outer membrane protein lpxD 589536 - 590600 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CTL0496 591793 - 590597 - | hypothetical protein TERM 777 591379 - 591365 - G 74 -4.3 -4.9725 | opp_overlap 591365 AGGCGTATAGAAAAA CAGTT GTGCT AACTG TTGTCTAAAAGACTT TERM 778 591676 - 591660 - G 73 -5.9 -4.54205 | opp_overlap 591675, overlap 591675 AGGATACCAAAGAAA GAATTCA CTA TGAACTC CACACAAATAAAATT TERM 779 591900 - 591913 + H 75 -8.1 -3.80855 | TTATATTTGCGAAGG CCGGA CCTT TCCGG TTACTTTTTCGCGCC TERM 780 592216 - 592232 + G 71 -8.7 -3.23853 | opp_overlap 592216, overlap 592214 TATATCGGTCAAGAA GCTGTTG CTA CAGCAGC TATTGCTTGCACAGG pdhA 592015 - 593037 + | pyruvate dehydrogenase E1 component alpha subunit TERM 781 593595 - 593572 - g 71 -8.2 -3.49858 | TGAATTAGACTACAA TCTTAAGGGA GAGG TCCCTTCAGA AGAATACCTGATCCC pdhB 593030 - 594016 + | pyruvate dehydrogenase E1 component beta subunit TERM 782 594306 - 594282 - g 73 -7.1 -4.23723 | opp_overlap 594282, overlap 594304 CAATATGATTTAAAA CAGCTCCTACC TTT GGAAGAAACTG TTGTTACAGATGCAG pdhC 594021 - 595310 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 783 595312 - 595330 + T 93 -11.8 -4.30987 | opp_overlap 595312 595315 595316 595320 TACTTCTCAATTAAA GAAGGGAA TGT TTCCCTTC TTTCTTCTAAGAAGT TERM 784 595330 - 595312 - T 90 -11.8 -3.90588 | opp_overlap 595312, overlap 595315 595316 595320 TACTTCTCAATTAAA GAAGGGAA TGT TTCCCTTC TTTCTTCTAAGAAGT TERM 785 595327 - 595315 - T 75 -7.7 -4.0825 | opp_overlap 595312, overlap 595312 595316 595320 TTCTCAATTAAAGAA GGGAA TGT TTCCC TTCTTTCTTCTAAGA TERM 786 595362 - 595316 - T 73 -9.4 -3.04468 | opp_overlap 595312, overlap 595315 595312 595320 TCTCAATTAAAGAAG GGAATGTTTCCCTTCTTTCTTC TAA GAAGTTGGTCGGGAAACATTCC AAATATTCGATGCAT glgP 597781 - 595337 - | glycogen phosphorylase CTL0500A 597937 - 598287 + | hypothetical protein TERM 787 598335 - 598311 - T 75 -9.3 -3.31322 | gap 1 CCGAACGGTGTACAA GGAGGC-GGC GCAATT GCCTGCCTCC TACCTCTAGTCTTCT dnaA 599711 - 598341 - | chromosomal replication initiation protein TERM 788 599181 - 599200 + g 73 -5.8 -4.57341 | gap 1, opp_overlap 599181 599180 GTGTTCCGTAAATAG CTCTG-ATG TAA CATACAGAG TTTTTACACCAGCTT TERM 789 599406 - 599436 + g 73 -5.4 -4.72497 | opp_overlap 599405, overlap 599408 CATGTTCGGATCAAT GTCCCCATACTTCA TAG TGAAGTATGCAGTC TTTTCTTGCTGGATC oxaA 602151 - 599788 - | putative inner membrane protein translocase component YidC TERM 790 602098 - 602085 - G 73 -5.3 -4.73635 | GATAACCGAAGAAAA TTTGG CAGC CCAAA AATGCCGCGCTTACC TERM 791 602237 - 602226 - R 80 -3 -5.63103 | CCCTAATCAAAAAAA CTTT GCAG AAAG ACAAAACCTCTCCAA TERM 792 602387 - 602413 + r 71 -9.6 -2.6583 | overlap 602384 ATAACCATCCCCCCT CTCTACATCAAA AAG TTTAATGTAGAG TCGCTTTCAGATGTG lgt 603279 - 602461 - | prolipoprotein diacylglyceryl transferase TERM 793 603326 - 603309 - H 81 -3.5 -5.61881 | overlap 603303 TCTCAAAAAGAAAAA CTTTTCT AAAT AAAAAAG ACTATGCCAAAAATT TERM 794 603365 - 603340 - H 83 -7.7 -4.63928 | AGACTATGCCAAAAA TTTTTTGCTAG CAAT CTTGCAAAAAA GATCTTCGCACGGTT CTL0505 603530 - 604177 + | putative lipoprotein CTL0506 604181 - 604951 + | inner membrane protein CTL0507 605542 - 605159 - | hypothetical protein CTL0508 605731 - 606975 + | putative membrane transport protein TERM 795 606995 - 607007 + G 71 -4.8 -4.60808 | CCCTTTTTCTGGTTA GGAG TGAAC CTCC TTTGTATTTTTGTCC TERM 796 607863 - 607836 - g 73 -7.1 -4.14874 | AGAATAGTTCTAAAA TCGCCATTGTT TTAAAT AATAATGGCGA GCCTATGGGAGTTTT TERM 797 608084 - 608063 - g 83 -8.8 -4.15453 | CAACTCATGTTAAAA CTTCTGGA TACTCC TCCAGAAG TAGGCGCCTCTATCA CTL0509 606965 - 608179 + | hypothetical protein CTL0510 609307 - 608183 - | putative cysteine desulfurase TERM 798 609166 - 609177 + g 71 -4.4 -4.86731 | overlap 609149 TTGAAGTTTCTTTAA CCAA TTTT TTGG TTTTCTTTCCAAAAC CTL0511 610059 - 609313 - | protein phosphatase 2C CTL0512 610378 - 610869 + | hypothetical protein dnaQ 610878 - 611576 + | DNA polymerase III subunit epsilon CTL0514 611573 - 612343 + | hypothetical protein CTL0515 612336 - 612926 + | hypothetical protein CTL0516 614887 - 612947 - | ABC transporter, ATP-binding and membrane components accA 615827 - 614853 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 799 615732 - 615756 + gr 93 -2.9 -5.95539 | opp_overlap 615736, overlap 615736 TTTTTGAATCTCTGA AGAAGAAAGCA GGC TGTTTTCTTTA TTTTTTTCTTTAAAC TERM 800 615736 - 615752 + gr 86 -5.9 -5.36181 | opp_overlap 615736, overlap 615732 TGAATCTCTGAAGAA GAAAGCA GGC TGTTTTC TTTATTTTTTTCTTT CTL0518 617141 - 615960 - | hypothetical protein ihfA 617561 - 617259 - | integration host factor alpha-subunit amiA 618560 - 617781 - | N-acetylmuramoyl-L-alanine amidase TERM 801 617909 - 617921 + gr 75 -9.1 -3.66178 | opp_overlap 617896 617909, overlap 617896 AACGAGCATCTAAAA GAGCG GCT CGCTC TTTAGAATTGGAAAG TERM 802 617921 - 617909 - GR 83 -9.1 -4.2231 | opp_overlap 617896 617909, overlap 617896 AACGAGCATCTAAAA GAGCG GCT CGCTC TTTAGAATTGGAAAG TERM 803 617955 - 617940 - GR 70 -5.4 -4.46835 | overlap 617936 AGAATTGGAAAGAAA CCCTGT TTCC ACAAGG ACCGCAGGCATGGTT murE 619926 - 618475 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase pbp 622192 - 620249 - | penicillin-binding protein TERM 804 620872 - 620882 + g 74 -4.6 -4.83169 | overlap 620881 TCGATAAAGACCATT CGGG AGA TCCG TTTTTATGGAAACGT TERM 805 621094 - 621108 + g 70 -2.8 -5.06451 | ATCGATTACTGACAA TGTCTT TTA GAGGCA TTTTTTGCCGTCCTG TERM 806 621539 - 621566 + g 100 -12.8 -4.21936 | opp_overlap 621531 621540 621546, overlap 621540 GTCTAAACGGTTTAA AGGAGAACGCAA CAAC TTGCGTTCTCCA TTTTCCCCTTCTAAC TERM 807 621565 - 621540 - G 100 -16.3 -3.5936 | opp_overlap 621539 621540, overlap 621531 621546 TCTAAACGGTTTAAA GGAGAACGCAA CAAC TTGCGTTCTCC ATTTTCCCCTTCTAA TERM 808 621540 - 621565 + g 100 -16.3 -3.1268 | opp_overlap 621540 621531 621546, overlap 621539 TCTAAACGGTTTAAA GGAGAACGCAA CAAC TTGCGTTCTCC ATTTTCCCCTTCTAA CTL0523 622466 - 622179 - | hypothetical protein mraW 623368 - 622466 - | S-adenosyl-methyltransferase MraW CTL0525 623646 - 624212 + | hypothetical protein CTL0526 624219 - 624638 + | hypothetical protein TERM 809 624694 - 624710 + F 71 -3.1 -5.06089 | GAGATTCTCCTTCTA TTATTGA GTA TTAATAA TTTTGTTTCTGATTT TERM 810 625230 - 625244 + G 72 -7.2 -3.91084 | overlap 625215 TAAGCTTAATGGAGC TTATCG TTT CGATAA TTTCATTGAAGGTCC dnaA2 624880 - 626247 + | chromosomal replication initiation protein CTL0528 626299 - 626883 + | hypothetical protein CTL0529 627514 - 626855 - | hypothetical protein TERM 811 627857 - 627873 + G 75 -5.2 -4.89852 | TATAGGATCCGTCCT TTTTGC TGGAT GCAAAA TTTTTCTCCCTCTCC TERM 812 627913 - 627927 + G 89 -7.2 -4.93316 | GCTATGCTGTAGGAG GAACTT GCG AAGTTC TTTTTGCTATTATTC nqrB 627516 - 629027 + | Na(+)-translocating NADH-quinone reductase subunit B TERM 813 629545 - 629559 + G 70 -7.2 -3.7732 | opp_overlap 629545 629544 629553 CAAAAAATCCAACAG CTATAG AAT CTATAG TTCTTCCTATAGAAG TERM 814 629811 - 629839 + G 90 -11.7 -3.67597 | AAAGGATCTGTATCT GCAGCATTAGGAG ACT CACCTAAAGCTGC TTCTTCCATCGACGG nqrC 629031 - 629981 + | Na(+)-translocating NADH-quinone reductase subunit C nqrD 629971 - 630612 + | Na(+)-translocating NADH-quinone reductase subunit D nqrE 630618 - 631352 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 815 631355 - 631371 + T 81 -10.1 -3.77206 | opp_overlap 631355 631354, overlap 631370 CAAGGCTTCATAAAT GGCGGTT AAT AGCCGCC TTTGCTAGGGTTCTA gcsH 631729 - 631376 - | glycine cleavage system protein H CTL0535 633821 - 631749 - | hypothetical protein TERM 816 632951 - 632930 - G 91 -8.1 -4.84311 | TTTTATATAACAAAA TTTCTCGAT ACAT ACCGAGAAA ATCAGACTCTTCTAC TERM 817 633091 - 633108 + g 80 -2.7 -5.56568 | opp_overlap 633091 CGAGCTTCTTTTAAA GAAGG CATCCCAA CCTTC TTTTTTTGCTCATCT TERM 818 633159 - 633135 - G 74 -7.9 -4.03183 | opp_overlap 633135 633137 ATCTATAAAACATAA CATTGCCTCTG TAA CAGAAGAAATG TACTTATCCCCAAAC TERM 819 633461 - 633439 - G 73 -2.7 -5.09762 | gap 1, overlap 633440 TCTGAAGAAATAAAA GGAGCATCGA ATCG CCGATAC-CC TTCGTAACTCCTCTC TERM 820 634000 - 633977 - R 100 -15.4 -3.26719 | opp_overlap 633973, overlap 633972 TGGACAAAGACCTAA GGGAGGATCT GTAC AGATCCTCCC TCCCTATTAGAAGAG CTL0536 635440 - 634016 - | phospholipase D lplA 636165 - 635446 - | lipoate-protein ligase A TERM 821 637039 - 637061 + G 76 -9.9 -3.29511 | gap 1, opp_overlap 637033 637037, overlap 637060 ATGTTTAAAGAATCG CGCCTCGATC CAGT GATCG-GGCG TTCTGCAGAAGTCGA clpC 636430 - 638994 + | ATP-dependent Clp protease trmU 640051 - 638975 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 822 639065 - 639025 - G 74 -6.2 -4.41348 | gap 2, opp_overlap 639033 639050 CTCCTCCTAAACAAA TGTC-CCCCTGG-TAGAAAG CTA CCGTCTGTCCAGGGGTGACA GCTTTCACAGGGACA TERM 823 639256 - 639232 - G 84 -10.1 -3.85698 | overlap 639237 GCTCTTGTCGATAAA GTAAAGGATGA TCT TCACCCCTTAC AATGTAAACAATATT TERM 824 640600 - 640577 - g 82 -3.2 -5.54338 | gap 1, opp_overlap 640581, overlap 640583 CAACGAAAACAAAAA CAACTAGAAGC GTC GCTTCC-GTTA GATAATGCGACCGAG TERM 825 641246 - 641217 - g 71 -2.2 -5.15381 | gap 2, opp_overlap 641217 641222, overlap 641221 AAGATATTCAAAAAA CCAT-TA-GCCCAG ATGT CTGGGCCTCTATGG TTCATTACCAGCATC TERM 826 641392 - 641378 - g 73 -5.8 -4.42619 | opp_overlap 641384 GAAGATTTGACAAAA CAATAT GAT ATATTG AACGCAGCCTTTAAT CTL0540 640283 - 641977 + | hypothetical protein TERM 827 642035 - 642001 - T 100 -13.1 -5.06735 | opp_overlap 642007, overlap 642007 CATAAATGACAAAAA GAAAAAGGAGAGC TGTTGCTGT GCTCTCCTTTTTC TCTAAATATTCCTGA TERM 828 642007 - 642029 + T 79 -6.3 -4.99638 | opp_overlap 642007 642001 TGACAAAAAGAAAAA GGAGAGC TGTTGCTGT GCTCTCC TTTTTCTCTAAATAT TERM 829 642029 - 642007 - T 100 -6.3 -5.69262 | opp_overlap 642007, overlap 642001 TGACAAAAAGAAAAA GGAGAGC TGTTGCTGT GCTCTCC TTTTTCTCTAAATAT CTL0541 643209 - 642064 - | hypothetical protein TERM 830 642662 - 642678 + g 80 -8.7 -3.92542 | opp_overlap 642657 GAAAGAGAAGCTCGA GCAGCAG CTA TTGCTGC TTCTTTAGGACTCAA TERM 831 642726 - 642742 + g 70 -3.7 -4.81357 | GAGAAGTATTTACAG GCTTTTT CTT GAGAAGC TTTCTTTTATCATCT TERM 832 642952 - 642935 - G 73 -3.5 -4.94168 | overlap 642937 ATACAAGAAAAGAAA TCCTTTT TCTC AAAAGAA GCCTTCCATGCAGAT CTL0542 643944 - 643267 - | PTS family membrane transport protein IIA subunit TERM 833 643507 - 643485 - G 74 -4.8 -4.84311 | overlap 643486 TTTGAGATAAGAAAA CGGGAACAAT AAT ATCGTACCCA ACGTTAATCAAGAAG ptsN_2 644423 - 643947 - | PTS family membrane transport protein IIA subunit dut 644862 - 644425 - | deoxyuridine 5'-triphosphate nucleotidohydrolase accD 645825 - 644899 - | acetyl-CoA carboxylase subunit beta sodM 646516 - 645896 - | superoxide dismutase mrsA 648429 - 646648 - | phosphoglucomutase TERM 834 647091 - 647079 - G 74 -7.7 -3.91858 | opp_overlap 647078 CATAGACCTCATAAA GCTCT AAC AGAGC ATCTCGTAACGTACA CTL0548 649048 - 648581 - | hypothetical protein TERM 835 649815 - 649799 - g 75 -5.1 -4.8487 | GGATCAAAAAAAGAA GCAGAAA AAC TTGCTGC TAAACAGGCGTTATC rnc 649157 - 649852 + | ribonuclease III TERM 836 650703 - 650689 - g 80 -2.8 -5.55769 | overlap 650690 TTCTACAAGAAAAAA TTGTAG AAA CTACAG GCTCTACCATTATCC radA 649836 - 651200 + | DNA repair protein RadA hemC 651244 - 651903 + | porphobilinogen deaminase TERM 837 652678 - 652654 - T 100 -14.4 -4.75776 | opp_overlap 652654 AATCTAAGCCAAAAA GCCCTTTCCT TTATG AGGAAAGGGC TTTTTATTTCTTTAT TERM 838 652654 - 652678 + T 100 -15.1 -5.56573 | opp_overlap 652654 AATCTAAGCCAAAAA GCCCTTTCCTT TAT GAGGAAAGGGC TTTTTATTTCTTTAT pknD 655502 - 652698 - | serine/threonine-protein kinase valS 658336 - 655517 - | valyl-tRNA synthetase CTL0555 658978 - 658463 - | hypothetical protein atpK 659324 - 658899 - | V-type ATP synthase subunit K atpI 661335 - 659386 - | V-type ATP synthase subunit I TERM 839 660043 - 660053 + g 71 -3.2 -4.95302 | overlap 660036 660034 TTGGGCTAGAAGAAA CTCT TTA GGAG TTTTCTTCTCTTTAA TERM 840 660420 - 660403 - G 81 -5.5 -5.1286 | opp_overlap 660403, overlap 660397 GAAAAAGGAGAAAAA GACCCAT AATG AAGGGTC TTTATCCGTTGATGC atpD 661952 - 661341 - | V-type ATP synthase subunit D atpB 663253 - 661937 - | V-type ATP synthase subunit B TERM 841 662790 - 662823 + g 95 -7.6 -5.12707 | CGCATCAACAGCGCA TTATGATTTTCTCC AGAAGA GGAGAAAATCGGAA TTTTTTGAGATTTGA atpA 665031 - 663256 - | V-type ATP synthase subunit A TERM 842 663568 - 663544 - G 86 -8 -4.62069 | opp_overlap 663543 663546 CTCTGATTTCAAAAA GATTTCCATG TCTTC CATAGAAATC CCTTCTTCCCCTACG CTL0561 665825 - 665025 - | hypothetical protein TERM 843 665645 - 665631 - G 82 -5.7 -5.07652 | GGTCCCAAAAGAAAA GGGAA TCGAT TTCCC TGCCCAGAAAAAAGC TERM 844 665926 - 665909 - R 100 -8.4 -5.38951 | opp_overlap 665909 AACGCATACAAAAAA GCTCCG CGAACT CGGAGC TTCTATCGTCAACGA TERM 845 665909 - 665926 + r 71 -8.4 -3.54475 | opp_overlap 665909 AACGCATACAAAAAA GCTCCG CGAACT CGGAGC TTCTATCGTCAACGA atpE 666618 - 665992 - | V-type ATP synthase subunit E TERM 846 666863 - 666841 - g 71 -4.8 -4.65153 | overlap 666836 666857 CGAGAGAAACGAAAA GATCTCCATG TAT CAAGGAAACC CTCTCCTCGTTATGC CTL0563 666727 - 667437 + | hypothetical protein TERM 847 667447 - 667435 - T 80 -7.7 -4.4267 | opp_overlap 667435 667430 CTGCAAAATGGAAAA TAGCG GAA CGCTA TCCTCTATGATACAA CTL0564 667816 - 667445 - | hypothetical protein tal 668844 - 667861 - | transaldolase B TERM 848 668573 - 668544 - G 100 -9.3 -4.72007 | CTGTATTAAAAGAAA GCCGGGCATCAAT TTCT AATGATACCCGAC CAGGAACATGCTTTA TERM 849 668926 - 668905 - R 74 -9.5 -3.12378 | gap 1, opp_overlap 668903 668903 668906 AACGATACTATTCAA GGGGGTTATG ACT CAT-ACCCCC TCTCTTTCTCTAGTT TERM 850 668906 - 668926 + r 79 -9.7 -3.39968 | opp_overlap 668905, overlap 668903 668903 ACGATACTATTCAAG GGGGTTATG ACT CATACCCCC TCTCTTTCTCTAGTT rpoC 673146 - 668956 - | DNA-directed RNA polymerase subunit beta' TERM 851 672636 - 672669 + g 71 -7 -4.1552 | gap 1, opp_overlap 672639, overlap 672639 TACCCCATTTTTCAA CAACTTCTCGAT-AT TTCGC ATCATTGAGAAGTTG TTTCTTCACGAGATC rpoB 676929 - 673171 - | DNA-directed RNA polymerase subunit beta TERM 852 676872 - 676890 + g 74 -4.6 -4.86385 | CTTCGACAAGATTAG GAAGATCT AAA ATATCTTC TTTCTTTTTGACGCT TERM 853 677157 - 677126 - R 83 -3.8 -5.5112 | gap 1, opp_overlap 677135, overlap 677127 TCCATTAAGAAAAAA CCATTGC-AACAGAA ATA TTCTGTTTGCGATGC CAAACACTAAAAGTT TERM 854 677156 - 677127 - R 72 -7.3 -3.89587 | gap 1, opp_overlap 677135, overlap 677126 CCATTAAGAAAAAAC CATTGC-AACAGAA ATA TTCTGTTTGCGATG CCAAACACTAAAAGT rplL 677682 - 677290 - | 50S ribosomal protein L7/L12 rplJ 678232 - 677714 - | 50S ribosomal protein L10 rplA 678952 - 678254 - | 50S ribosomal protein L1 rplK 679400 - 678975 - | 50S ribosomal protein L11 TERM 855 679188 - 679171 - G 71 -8.5 -3.45366 | opp_overlap 679180, overlap 679180 TTTTTAATTAACGAA GAAACAG GAGA CTGTTTC ATTACAAAAGAAAAA nusG 680054 - 679506 - | transcription antitermination protein NusG secE 680306 - 680058 - | preprotein translocase subunit SecE TERM 856 680433 - 680412 - R 90 -12.3 -3.74345 | AGCTACACACCCAAA GGCAAGGCT TTTC AGCCTCGCC AACATATCACTTAAT tufA 681633 - 680449 - | elongation factor Tu infA2 682202 - 681981 - | translation initiation factor IF-1 TERM 857 682521 - 682498 - H 82 -8.2 -4.35116 | opp_overlap 682516 682518, overlap 682518 TACTTCACAGTAAAA CTCCCCATTC TTCC GAATGAGAAG CTTCGCTTCTGTTTT TERM 858 682518 - 682530 + H 70 -7.7 -3.63744 | opp_overlap 682498 682518, overlap 682516 CATTCTTCCGAATGA GAAGC TTC GCTTC TGTTTTAGAAAAACA CTL0576 682615 - 683526 + | hypothetical protein CTL0577 683523 - 683969 + | hypothetical protein TERM 859 684007 - 683965 - T 100 -11.4 -4.56775 | opp_overlap 683975 683977, overlap 683970 683973 ATCTGGCTCGAAAAA CCTAATGAGATAGCCAATGA TTC TCATTGGCTATCTCCTCCTG CTCACAAGACTACTT TERM 860 684002 - 683970 - T 100 -16.5 -3.45031 | opp_overlap 683975 683977, overlap 683965 683973 GCTCGAAAAACCTAA TGAGATAGCCAATGA TTC TCATTGGCTATCTCC TCCTGCTCACAAGAC TERM 861 683999 - 683973 - T 100 -16.8 -2.86773 | opp_overlap 683975 683977, overlap 683970 683965 CGAAAAACCTAATGA GATAGCCAATGA TTC TCATTGGCTATC TCCTCCTGCTCACAA TERM 862 683975 - 683997 + T 93 -13.6 -2.83715 | opp_overlap 683973 683970 683965, overlap 683977 AAAAACCTAATGAGA TAGCCAATGA TTC TCATTGGCTA TCTCCTCCTGCTCAC TERM 863 683977 - 683995 + T 82 -11.8 -2.96692 | opp_overlap 683973 683970 683965, overlap 683975 AAACCTAATGAGATA GCCAATGA TTC TCATTGGC TATCTCCTCCTGCTC TERM 864 685354 - 685336 - T 75 -3.1 -5.252 | overlap 685339 TACTGTTACAAAAAA TGATGGA TTAAT TCCAACA ACCCGAATACGAGCA TERM 865 686143 - 686110 - T 100 -19.1 -5.81412 | opp_overlap 686110 TCGAGTCAAAAAAAA GCTCTTTGCTAGACC TTTA GGTCTAACAAAGAGC TTTATCATCGTTCGC TERM 866 686110 - 686143 + T 100 -16.9 -4.02022 | opp_overlap 686110 TCGAGTCAAAAAAAA GCTCTTTGCTAGACC TTTA GGTCTAACAAAGAGC TTTATCATCGTTCGC CTL0580 686363 - 686181 - | hypothetical protein TERM 867 686612 - 686592 - R 86 -9 -4.59773 | opp_overlap 686592 686583 GCCCATGTCTAAAAA GCCCTCTG TAGAC CAGAAGGC TTGCTTTGACTTTGT trpC 687712 - 687086 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 868 687207 - 687189 - G 86 -11.8 -3.15013 | overlap 687187 687193 ACCCCAGAAGACACA TCAATCCC CCT GGGATTGA GAAGACTGATACCTT TERM 869 688323 - 688313 - g 76 -6.8 -4.57569 | GTACTTGCTGAAAAA GCTG CTG CAGC TATCCATAGTGGAAT tpiS 687908 - 688732 + | triosephosphate isomerase xseA 688746 - 690296 + | exodeoxyribonuclease VII large subunit xseB 690280 - 690498 + | exodeoxyribonuclease VII small subunit TERM 870 690580 - 690555 - g 100 -14.8 -2.89191 | opp_overlap 690547 GGACACCGTTATACA GCGCCTTCTG GTTTTA CAGAAGGCGC TTGAGGACTGTCATT CTL0584 690505 - 690777 + | hypothetical protein TERM 871 691130 - 691140 + G 87 -8.2 -4.53439 | TTTCTCTGGTCATGC GGGC AAT GCCC TTTCTTTAGCTTTAG dxs 690774 - 692696 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 872 692693 - 692679 - f 70 -8.6 -3.06183 | CCCATTCCTATCGAA CGCTTT TTT AAAGCG TAGCGATTGCGGTTG pykF 692793 - 694250 + | pyruvate kinase TERM 873 694710 - 694679 - g 80 -3.8 -5.31059 | gap 1, overlap 694667 ACAGTAAGGAAAAAA TCCTTTCTGAAATAG CTG CCATTCCAGAT-GGA ACTCAACTGACTTTG TERM 874 695414 - 695402 - g 76 -2.7 -5.28826 | AAATTGGAGAAAAAA TTCGA TTT TCAAA TAAGCCTGCTCGCTA TERM 875 695546 - 695556 + G 70 -5.4 -4.45807 | ACTTTCAACAAATGT CTCT TCA AGAG TTATTTATTTTCCTG TERM 876 697177 - 697189 + G 72 -7.7 -3.90045 | GGTCCATCCGCTTCC GGGAA ACA TTCCC TTGTATTTGATATTC TERM 877 697347 - 697337 - g 89 -6.8 -5.36441 | TCGCGATAGAAAAAA CGAG CGC CTCG AGAAATTCCAATCAT TERM 878 697532 - 697551 + G 73 -2.8 -5.1523 | overlap 697543 TAACGATTACTGTTC CTTTCCCT AAAG AGGAAGAG TTTTTCTCTTATACG uvrA 694273 - 699633 + | excinuclease ABC subunit A dnaX 699851 - 701251 + | DNA polymerase III subunits gamma and tau CTL0589 701244 - 701534 + | hypothetical protein ptsI 703259 - 701544 - | phosphoenolpyruvate-protein phosphotransferase TERM 879 701733 - 701710 - G 73 -8.9 -3.54256 | opp_overlap 701709, overlap 701708 AGTCCTAAAAACATA GGCAGAAGA GCAGGA TCTCCTGCC ATCTCTCCACATACA ptsH 703588 - 703259 - | phosphocarrier protein HPr CTL0592 704187 - 703726 - | hypothetical protein TERM 880 704102 - 704090 - G 95 -3.3 -6.02914 | opp_overlap 704091, overlap 704091 TGGATAGAAAAAAAA TGACG ATA CGTCT CATCTCCTAACTTAG TERM 881 704101 - 704091 - G 71 -6.8 -4.20122 | opp_overlap 704091, overlap 704090 GGATAGAAAAAAAAT GACG ATA CGTC TCATCTCCTAACTTA CTL0592A 704426 - 704244 - | hypothetical protein CTL0593 704471 - 706000 + | hypothetical protein TERM 882 706003 - 706058 + T 76 -10.7 -2.64318 | gap 1, opp_overlap 706018, overlap 706018 GATTATTCTCTAAAT CTGTTCTAAAAAAAAGCGCTCCT-GT TTATC ACTAGGAGCGCTTTTTGTTGGAAATG TCACTTGTATAGTCT TERM 883 706043 - 706018 - T 100 -9.8 -5.75342 | gap 1, opp_overlap 706018 706003 CTGTTCTAAAAAAAA GCGCTCCT-GT TTATC ACTAGGAGCGC TTTTTGTTGGAAATG TERM 884 706018 - 706043 + T 93 -9.8 -5.07486 | gap 1, opp_overlap 706018, overlap 706003 CTGTTCTAAAAAAAA GCGCTCCT-GT TTATC ACTAGGAGCGC TTTTTGTTGGAAATG CTL0594 708108 - 706072 - | 2-oxoisovalerate dehydrogenase alpha subunit TERM 885 706118 - 706132 + g 79 -8.6 -4.15453 | AAGATTTTTTCTTTT TGAGGT AGC ACCTCA TTTTCCAATACCTTA TERM 886 706181 - 706155 - G 73 -10.2 -2.56177 | overlap 706158 706160 706171 ATACCTTAGAGTAAG GAACAGGAGCAT GCA ACGCTCCTATCC GCTTGATAGGAGCGT TERM 887 706178 - 706158 - G 71 -8.3 -3.43071 | overlap 706155 706160 706171 CCTTAGAGTAAGGAA CAGGAGCAT GCA ACGCTCCTA TCCGCTTGATAGGAG TERM 888 706176 - 706160 - G 71 -8.7 -3.28487 | overlap 706158 706155 706171 TTAGAGTAAGGAACA GGAGCAT GCA ACGCTCC TATCCGCTTGATAGG TERM 889 706195 - 706171 - G 100 -14.4 -3.11459 | overlap 706160 706158 706155 AACAGGAGCATGCAA CGCTCCTATC CGCTT GATAGGAGCG TCAAGATATCTGTAA dnaJ 709321 - 708143 - | heat shock chaperone protein TERM 890 708176 - 708206 + g 85 -9.2 -4.1585 | AAAAAAACCTTTGAT TTTGTCTAAGAAAC TCC GTTTCTTAGGGAAA TTTTCAGCCTTCTCC TERM 891 709249 - 709261 + g 80 -6.3 -4.86861 | GGTACTTTACAGCGA GCTTA CGG TAAGC TTTCTTTATTTCTTC rpsU 709526 - 709350 - | 30S ribosomal protein S21 CTL0597 710356 - 709724 - | O-sialoglycoprotein endopeptidase TERM 892 710327 - 710315 - G 73 -5.5 -4.65838 | GACATAGGCCAAAAA CGGCT GAG AACCG GAAGTGTCTACAATA lon 710666 - 713125 + | ATP-dependent protease La TERM 893 713130 - 713159 + F 86 -11.5 -3.78442 | opp_overlap 713128 713127, overlap 713131 713153 713153 CTGGGGTTTAAATCG TGTTCTCTGAGCT GTAA GGCTCAGAGAACC TTCTCTCTTATTCTC TERM 894 713131 - 713158 + F 100 -15 -2.8598 | opp_overlap 713128 713127, overlap 713130 713153 713153 TGGGGTTTAAATCGT GTTCTCTGAGCT GTAA GGCTCAGAGAAC CTTCTCTCTTATTCT TERM 895 713437 - 713452 + G 70 -5.4 -4.5493 | TTAATCTCTTTAGCC GTAGGT TCCT GCCTAC TTGTTTTGTTTCCAT CTL0599 713227 - 713592 + | hypothetical protein TERM 896 713870 - 713848 - f 82 -9.2 -4.16943 | CCCTACATTCCAAAA CCTCTTACCT TGC AAGCAAGAGG AAGTCGCTTGTTAGG CTL0600 713935 - 714849 + | ribonuclease Z TERM 897 715496 - 715484 - g 95 -7.7 -5.22039 | GGGAAAGGGAAAAAA GAACG AAT CGTTC CTATGACAAAGGTAG xerC 714911 - 715858 + | site-specific tyrosine recombinase XerC CTL0602 715912 - 717501 + | ABC transporter, ATP-binding component CTL0603 717537 - 718127 + | Maf-like protein TERM 898 718576 - 718589 + G 73 -5.3 -4.73973 | opp_overlap 718576 TATGAAAAATAGCAA GGTAA GTGA TTACC TTTATTCTTTTATCT TERM 899 719787 - 719767 - g 77 -4.7 -4.92783 | opp_overlap 719769 719772, overlap 719769 AACCCATTACAAAAA TATCCCGAT CTT ATCAGGATT GTTAATGAGAATAGT TERM 900 719785 - 719769 - g 73 -7.3 -4.08042 | opp_overlap 719769 719772, overlap 719767 CCCATTACAAAAATA TCCCGAT CTT ATCAGGA TTGTTAATGAGAATA CTL0604 718109 - 719809 + | putative lipoprotein TERM 901 720046 - 720062 + G 73 -8.7 -3.45033 | opp_overlap 720046 720045, overlap 720048 TTGTGGGATCAAAAT CGTTGCT CAT GGCAACG TTATGGTCAATTATC TERM 902 720878 - 720860 - g 77 -8.2 -4.00411 | opp_overlap 720860 720863, overlap 720863 CAAAATGTTAAACAA GAATTGCC TCA AGCAATTC TTCATCACCGACCAG CTL0605 719816 - 721918 + | hypothetical protein TERM 903 721954 - 721928 - T 100 -10.3 -6.17268 | opp_overlap 721928 GGATAACAAAAAAAA CCAAACTAGTT TGTCC AACCAGTTTGG TTTTTTTTCTTATCG TERM 904 721928 - 721954 + T 100 -8.1 -6.17268 | opp_overlap 721928 GGATAACAAAAAAAA CCAAACTAGTT TGTCC AACCAGTTTGG TTTTTTTTCTTATCG secG 722300 - 721992 - | preprotein translocase subunit SecG def 723001 - 722456 - | peptide deformylase ksgA 724109 - 723276 - | dimethyladenosine transferase CTL0609 725186 - 724125 - | hypothetical protein CTL0610 727605 - 725491 - | hypothetical protein TERM 905 726645 - 726629 - G 88 -6.6 -5.24799 | opp_overlap 726631 TCAGAAAGATAAAAA GATCCT GATTT AGGATC CGTTAGCTCTTTAAT TERM 906 727950 - 727964 + H 71 -3.5 -5.15634 | TTTTACCTTTATTAG GCGTG GTAAA TACGC TTTTTTGGTAAAATG TERM 907 727980 - 728017 + H 78 -10.7 -3.16055 | gap 1, opp_overlap 727979 727982, overlap 727983 727993 728016 TTTTTTGGTAAAATG GAG-GGGTTTGGAGGAAG AGA CTTCTTCTAATCCCTCTC TTCCTAAAGAATTTA TERM 908 727983 - 728013 + H 80 -11.2 -3.12895 | opp_overlap 727982 727979, overlap 727980 727993 TTTGGTAAAATGGAG GGGTTTGGAGGAAG AGA CTTCTTCTAATCCC TCTCTTCCTAAAGAA CTL0611A 728062 - 728394 + | hypothetical protein TERM 909 728780 - 728768 - T 74 -9.1 -3.40403 | opp_overlap 728768 728765 GTCTCCTCACTAGAA CGCCA GTC TGGCG TCATCTTTATAGAAG CTL0613 729604 - 729014 - | putative inner membrane protein TERM 910 729757 - 729724 - R 78 -3.1 -5.35354 | gap 1, overlap 729727 729728 TACAGAAGGAAAAAA GCAGCCGCACCATAAT ATA AATATGGCGCGAA-GC TTTCTGGAAACGATC CTL0614 730482 - 729856 - | hypothetical protein TERM 911 730558 - 730523 - R 100 -12.1 -5.08178 | ATATAGACACAAAAA CCCTTTATTACCTCT GTAAAA AGACGTAATAAAGGG CACAGTTCATCTCAT TERM 912 730605 - 730581 - R 82 -10.8 -3.33162 | CATCTCATTTTAGAA GACAGATAGG CTTTT CCTATCTGCC AAAATCAAACTTATT dapA 731504 - 730644 - | dihydrodipicolinate synthase TERM 913 731018 - 731003 - G 74 -4.7 -4.7497 | overlap 731011 CTGACTCAGCAAAAA GCTCA CAAGCC TGAGC AGACCCTCCAGAATC lysC 732809 - 731514 - | aspartate kinase TERM 914 731658 - 731615 - G 73 -5.4 -4.67608 | gap 1, overlap 731616 GACTCCAACATAAAA CTGGAGTTCTGTGTAGAGCCT CAA AGACTCTAGACATA-CTCCAT GAAGCTAGCTTCGCT TERM 915 731657 - 731616 - G 71 -8.9 -3.39842 | gap 1, overlap 731615 ACTCCAACATAAAAC TGGAGTTCTGTGTAGAGCCT CAA AGACTCTAGACATA-CTCCA TGAAGCTAGCTTCGC TERM 916 731869 - 731846 - G 86 -9 -4.34267 | gap 1, opp_overlap 731845 731841, overlap 731848 731866 GTACACAACCCAAAA CATCCTCTAGT CTC ACTAGAGGA-G AATTGTATTCTACAA TERM 917 731868 - 731848 - G 100 -12.7 -3.76769 | opp_overlap 731845 731841, overlap 731846 731866 ACACAACCCAAAACA TCCTCTAGT CTC ACTAGAGGA GAATTGTATTCTACA asd 733806 - 732802 - | aspartate-semialdehyde dehydrogenase dapB 734577 - 733816 - | dihydrodipicolinate reductase TERM 918 734210 - 734187 - G 73 -5.2 -4.64144 | opp_overlap 734189, overlap 734178 734189 AAGAAGTGCTAAAAA GTTTTGCAGC AAAA GCTGCTAATC GCTTTTGTACATACG CTL0619 736481 - 734754 - | putative integral membrane protein TERM 919 735469 - 735453 - G 83 -9.5 -3.99374 | TGCTAGCAATAATAA TCCTGAT AAA ATCAGGA TCCGCTGTTGTTTCT TERM 920 735907 - 735923 + g 78 -2.2 -5.47218 | opp_overlap 735907 TCTTCTGGAGTAAGA GCTTCA CCCGA TGCAGC TTTTTTTGACTGGAA TERM 921 736239 - 736216 - G 73 -5.3 -4.60924 | GAAATTCCTGAAAAA GCAATCGCT AAAACA ATCGATTGC GGAACTCCAGGAGCT TERM 922 737724 - 737705 - gH 80 -4.9 -5.10029 | overlap 737706 ATGAATTGCAAAAAA TGGGTGG TTCTGT CCACCCT ACTCGTGACGGTCTA TERM 923 737723 - 737706 - gH 73 -8.4 -3.64933 | overlap 737705 TGAATTGCAAAAAAT GGGTGG TTCTGT CCACCC TACTCGTGACGGTCT aroA 736651 - 737973 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroL 737915 - 738469 + | shikimate kinase TERM 924 739142 - 739184 + G 100 -16.5 -3.59979 | opp_overlap 739133 739134 TGGAAAGCTTCCAGC TCTTTTAGCTGCAGGCATG ATGAG CATCCCTGCGGCTAAAGGA TTTGAAATAGGAGCC aroC 738462 - 739535 + | chorismate synthase TERM 925 740159 - 740144 - g 80 -2.6 -5.41746 | gap 1, opp_overlap 740145 740147, overlap 740147 AATGCTTTAAAAAAA GAAGACA AGC TGTCT-C TTCTTATCAAAAAGA TERM 926 740157 - 740147 - g 75 -5.4 -4.79949 | opp_overlap 740145 740147, overlap 740144 GCTTTAAAAAAAGAA GACA AGC TGTC TCTTCTTATCAAAAA aroB 739532 - 740653 + | 3-dehydroquinate synthase aroE 740634 - 742076 + | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein TERM 927 742771 - 742753 - g 95 -3.1 -5.95539 | opp_overlap 742755, overlap 742755 CTGTAAACAAAAAAA CATCCCT TATCT AGGGATT GTTTATACTGCCTCT TERM 928 742769 - 742755 - g 75 -5.7 -4.61687 | opp_overlap 742755, overlap 742753 GTAAACAAAAAAACA TCCCT TATCT AGGGA TTGTTTATACTGCCT CTL0625 742118 - 742903 + | hypothetical protein TERM 929 743647 - 743674 + G 70 -9.3 -2.89564 | gap 1, opp_overlap 743645 743644 TTCCCAAATGAACGG GTGAGT-CTGAC AATTG GTCAGTACTCAC TCTATGCAATAGACG TERM 930 744238 - 744271 + G 70 -5.3 -4.46112 | gap 1, opp_overlap 744241, overlap 744241 TACGAAACTGTAATC GA-AGGGTTTGCAACT ATC GGTTGCGGCCCCTATC TTTCTTTCGCTCCAG CTL0626 743044 - 744372 + | hypothetical protein TERM 931 745153 - 745182 + G 73 -9.9 -3.06492 | opp_overlap 745153 GTCTTCCTCAAAATA TGGCGGCCTCTGC AAGT GCGGGGGCGGTCA TGTTAGCGTGGATGC TERM 932 745199 - 745212 + G 74 -6.7 -4.25873 | GTTAGCGTGGATGCT TTCCG GAAT CGGAA TATTTTTTATAGCAA TERM 933 746405 - 746388 - g 73 -7.1 -4.17417 | opp_overlap 746391, overlap 746391 746399 GGAATCAGACATAAA CAAGAAA AAAC TTTCTTG AATCGTAAAGAAATC CTL0628 745044 - 746495 + | arginine/ornithine antiporter TERM 934 746543 - 746573 + F 100 -12.8 -4.40333 | opp_overlap 746542 746543 TTATCTTTTCAAAAG GAACTGGTTCTTTT TCA AAGAGAATCAGTTC TTTCTATTCTTTAAA TERM 935 747191 - 747206 + G 70 -5.4 -4.47328 | overlap 747192 GCTGATCGATGACAT TTCAGC AATC GCTGAG TTTTATGATCACATT CTL0629 746667 - 747725 + | putative oxidoreductase mdhC 748747 - 747767 - | malate dehydrogenase TERM 936 747852 - 747836 - G 74 -7.9 -3.91897 | opp_overlap 747840, overlap 747840 TTTCCCACGGATAAA GGCATCC CAA GGAAGCC CTGGAATCACTTCAT TERM 937 748288 - 748247 - G 76 -9.7 -3.32844 | gap 1, opp_overlap 748244 TGCTCTATGCGATAA CATGCTATGCATACGATT CTGGTCC AATCGTA-GCATCGCATG AAAGTTCTTTCTCAA TERM 938 748863 - 748845 - R 72 -6 -4.46212 | opp_overlap 748844 GTTTGGATGATAAAA GAATCAAG TAC CTAGATTC CTTAGTAAAAGCTTT TERM 939 748916 - 748891 - R 100 -13.5 -5.75342 | opp_overlap 748874 748888, overlap 748874 TTTTGGCAAAAAAAA GCTCATCTATT TTTC AATAGATGAGC CGACTTTAACTGATA ltuA 749077 - 748937 - | late transcription unit A protein pgi 750769 - 749192 - | glucose-6-phosphate isomerase TERM 940 750797 - 750811 + r 74 -5 -4.94972 | GAGGAAATGTGATAC GAGAGA CCT TCTTTC TTTTTACTTGTACTA CTL0634 752225 - 750882 - | putative nucleotide-binding protein TERM 941 751773 - 751762 - G 73 -7.2 -4.20367 | CGTGGTAATAAATAA CGCG CTTG CGCG AGCTCTACCTGTAAT phnP 753038 - 752238 - | metal-dependent hydrolase TERM 942 752870 - 752886 + g 77 -3.7 -5.09895 | TTCTAAGATCTGGAC CTGTATC AAT GATAAAG TTTTTTCCCTGACTC TERM 943 753000 - 752967 - G 70 -7.3 -3.87364 | opp_overlap 752976, overlap 752968 CTCACAAGAACAGAA GGGCACAGGGATTCC TTCC GGATCTCCTGTGCCT AAAAAAACAATCTTC TERM 944 752999 - 752968 - G 79 -10.8 -2.91696 | opp_overlap 752976, overlap 752967 TCACAAGAACAGAAG GGCACAGGGATTCC TTCC GGATCTCCTGTGCC TAAAAAAACAATCTT artJ 753840 - 753067 - | arginine transport substrate-binding protein TERM 945 753626 - 753598 - G 78 -8.9 -3.75437 | AATGAGTGCATCAAA GGAAAACTCCCGA ACG TCAAGCGTTTTCC CCAGCTTGTTACTAA aroG 754745 - 753909 - | 3-deoxy-7-phosphoheptulonate synthase TERM 946 754843 - 754871 + r 83 -10.3 -3.81689 | opp_overlap 754843 TTTCAATGAAAAAAA CGCCCTCTTCTCT TGA AGAGAAGAGAACG TTTAATGATGCTATT TERM 947 754871 - 754843 - R 100 -14.7 -5.63103 | opp_overlap 754843 TTTCAATGAAAAAAA CGCCCTCTTCTCT TGA AGAGAAGAGAACG TTTAATGATGCTATT CTL0638 755073 - 754882 - | hypothetical protein TERM 948 755168 - 755139 - H 75 -2.3 -5.42198 | overlap 755159 TCTTAAAAAATAAAA TTAAATTCAAATG AAAA CAATTTAATTTAA AACCATTAAATTCAT TERM 949 755218 - 755194 - H 70 -5.9 -4.21607 | opp_overlap 755201, overlap 755179 TTCATTGAAGACAAA GAAAAACTTTT GTT AAAATTTTTTC GCTATACCGCAAAAT TERM 950 755201 - 755211 + H 70 -2.6 -5.1287 | opp_overlap 755194 AAGACAAAGAAAAAC TTTT GTT AAAA TTTTTTCGCTATACC CTL0639 755256 - 755987 + | hypothetical protein CTL0640 757617 - 755998 - | hypothetical protein TERM 951 756220 - 756209 - G 71 -3 -5.00616 | overlap 756182 TCGCGTTGCAAAAAA GAAA GAGC TTTC TCTAAGGCAAACGCA TERM 952 757621 - 757574 - G 71 -4.4 -4.89852 | gap 2, overlap 757578 CGATACTCACAAAAA CGC-ATTCGTTGT-TGGATGGA ATTAGA TCCATCCACACAACACATAACG AGCAGATATACTATG CTL0641 757967 - 757632 - | hypothetical protein CTL0642 758833 - 757964 - | hypothetical protein TERM 953 761024 - 761010 - g 75 -2.1 -5.28942 | gap 1 TACTGGAAAGAAAAA GT-GGC CCAC GCCTAC GAGATCAACCTCAAA CTL0643 759120 - 761195 + | hypothetical protein CTL0644 761556 - 761209 - | hypothetical protein TERM 954 762299 - 762318 + G 70 -3.6 -4.79752 | gap 1 GGAAAACGTGTTGGC TCTGCTACC TTC GGTGG-AGA TTTTATCTTCTTACG TERM 955 762431 - 762442 + G 78 -4.4 -5.24531 | CCAGAAGCTTGCATG GTCA ACTC TGAC TTTTTTGTCGCCGCT TERM 956 762576 - 762606 + G 70 -5.4 -4.42238 | AAAAACGTTATAATC GAAGCGATGAAGCC GTC GATTTCTTTGCTTC TTTTCGTTACACTCC CTL0645 761738 - 762964 + | hypothetical protein TERM 957 763000 - 763014 + F 83 -8.6 -4.20368 | opp_overlap 763002 AAATTACGCTGGACA GATGAG AGT CTCATC TTTATATTACCGTCC TERM 958 764079 - 764095 + G 73 -3.7 -4.93595 | opp_overlap 764079 764081, overlap 764081 ACCCACTCAAGCGAA CATCTCT GAT AGAGATC TTTTTGACTTTTTCT dapL 763072 - 764256 + | L,L-diaminopimelate aminotransferase CTL0647 764264 - 765271 + | ABC transporter substrate-binding component CTL0648 766410 - 765280 - | hypothetical protein TERM 959 767036 - 767020 - g 70 -7.3 -3.84825 | TCCACCTATACCAAA TCGGAAC CAA ATTCCGA GATGAAATCCGACCT TERM 960 767403 - 767414 + G 74 -4.4 -5.00884 | opp_overlap 767403 ATTCGAACAATTGAA GACT TAGA AGTC TTTTTTAACACCCCT TERM 961 767929 - 767919 - g 71 -6.8 -4.13805 | AAAAATGGAGATAAA CAGC TTT GCTG GATGGGGACATATGG TERM 962 768330 - 768308 - g 100 -10 -4.56597 | TTGGTGCTCTAAAAA TCTTCCTTGT CAT ACAAGAAAGA TCCCTCCACTCCGAG proS 766611 - 768356 + | prolyl-tRNA synthetase CTL0650 768425 - 769603 + | heat-inducible transcription repressor grpE 769600 - 770172 + | HSP-70 cofactor dnaK 770198 - 772180 + | molecular chaperone DnaK TERM 963 772201 - 772236 + F 100 -6.8 -5.75945 | opp_overlap 772208, overlap 772202 772203 TTTATTCATCTTCCT TAAGCAAGAGCCTCTT GAAA AAGGGGCTCTTGCAGC TTTTTTTTAAAAAAT TERM 964 772202 - 772235 + F 85 -10.3 -4.04482 | opp_overlap 772208, overlap 772201 772203 TTATTCATCTTCCTT AAGCAAGAGCCTCTT GAAA AAGGGGCTCTTGCAG CTTTTTTTTAAAAAA TERM 965 772203 - 772234 + F 95 -13.8 -3.01966 | opp_overlap 772208, overlap 772202 772201 TATTCATCTTCCTTA AGCAAGAGCCTCTT GAAA AAGGGGCTCTTGCA GCTTTTTTTTAAAAA TERM 966 772229 - 772208 - f 72 -8.7 -3.33815 | opp_overlap 772203 772202 772201 ATCTTCCTTAAGCAA GAGCCTCTT GAAA AAGGGGCTC TTGCAGCTTTTTTTT TERM 967 772516 - 772500 - g 77 -3.8 -5.21459 | overlap 772513 AAAAACAAAAAGAAA TTTCTA AAAAA TAGAAA GCAGGTTCTGGTTCC vacB 772473 - 774557 + | exoribonuclease II CTL0655 774813 - 775577 + | hypothetical protein TERM 968 775605 - 775616 + T 74 -5.8 -4.57073 | opp_overlap 775603 775612 775613 AAGAGTAAGGCAACC GCTG AAAC CAGC TTTTTAAAAAAGATG TERM 969 775778 - 775760 - T 74 -6.1 -4.61633 | overlap 775777 AGACAGGCTGAAAAA TCTTACT TTAGG AGTAAGA GCTGCTAGGGAAACC TERM 970 775800 - 775779 - T 70 -8.7 -3.17229 | opp_overlap 775779 775779, overlap 775777 775780 ACTTTAGGAGTAAGA GCTGCTAGG GAAA CCTAGCAGA CTTGTAAACCCCATC TERM 971 775779 - 775801 + T 70 -8.5 -3.29263 | gap 1, opp_overlap 775777 775779 775780, overlap 775779 ACTTTAGGAGTAAGA G-CTGCTAGG GAAA CCTAGCAGAC TTGTAAACCCCATCT TERM 972 775799 - 775780 - T 85 -12.2 -2.50016 | opp_overlap 775779 775779, overlap 775779 775777 CTTTAGGAGTAAGAG CTGCTAGG GAAA CCTAGCAG ACTTGTAAACCCCAT TERM 973 775853 - 775832 - T 73 -3.8 -5.1485 | opp_overlap 775832 GAAGCAAGAGAAAAA GTTATTTG TTTCTG CAAACAAC CTTTCTAACGAAAGG TERM 974 775868 - 775853 - T 74 -7.6 -3.90744 | TGTTTCTGCAAACAA CCTTTC TAAC GAAAGG CACAGGCTTTTTCAT TERM 975 775980 - 775991 + T 100 -5.8 -5.89921 | overlap 775977 GAATCCGGCTTACTC GCTC TTCC GAGC TTTTTTTATTATAAT CTL0656 776986 - 776000 - | carbohydrate isomerase sucB 778184 - 777018 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 976 778418 - 778397 - R 93 -10.9 -4.91429 | opp_overlap 778401 AAACCTTAAAGAAAA CGAAGAGAG AAAA CCCTCTTCG TTAAAAGATCTCTAA gltT 779668 - 778430 - | Sodium:dicarboxylate symport protein CTL0659 780774 - 779665 - | tetraacyldisaccharide 4'-kinase TERM 977 780180 - 780198 + g 72 -7.4 -4.07568 | TCGCCAATCTTTCTG GGAAGTCT CGA AGTCTTCC TTTTGGGAAAAAAGA TERM 978 780938 - 780921 - R 83 -7.1 -4.99972 | overlap 780925 ATAAAACATTAAAAA TCAAGTT TCAA AACTTGA ATCATAAAAGATTTC CTL0660 781749 - 780940 - | 23S rRNA methyltransferase TERM 979 781022 - 781044 + g 71 -9.2 -3.06815 | opp_overlap 781020 AGGTTTAATGAATCT GCTTTCCCTA ACA TAGGTAAAGC TATGTTACAAAAACT CTL0661 782564 - 781737 - | N6-adenine-specific DNA methylase TERM 980 782071 - 782051 - G 84 -11.3 -3.14132 | TCTTTCCTCGACGAA TTTCCTTCT TCA AGAAGGAAA ACACATCTTCTATAA ribC 783160 - 782561 - | riboflavin synthase subunit alpha CTL0663 783553 - 784017 + | transcriptional regulator NrdR TERM 981 784152 - 784136 - g 73 -2.9 -5.09173 | overlap 784126 CAAGAGGTCAAAAAA CCTAATG AGG CAACAGG CTATTCTCAGCACCA TERM 982 784400 - 784376 - g 75 -2.2 -5.25772 | AAATCACAAGAAAAA TTCGAAAAAG GCCTT CTTTCTGGAA ACTAGTTACAATGCC dksA 784031 - 784405 + | dnaK suppressor protein lspA 784411 - 784914 + | lipoprotein signal peptidase CTL0666 785016 - 786377 + | Sodium/alanine symporter protein pcnB 786593 - 787870 + | polyA polymerase TERM 983 788382 - 788392 + G 73 -5.4 -4.7373 | TCGGATTGACGATCT TCTC ATT GAGA TTTTTCATCCAGTGG TERM 984 789677 - 789667 - g 70 -5.4 -4.45545 | AGAAAAACAAAAAGA CTCT TGC AGAG ATGTGTATCAAGCAA lpxB 787931 - 789754 + | lipid-A-disaccharide synthase TERM 985 791837 - 791812 - g 84 -2.6 -5.69793 | overlap 791814 791818 ATACTAAACAAAAAA TATTAAGAGC TTCTTG GCTCCCAACA GGAGAATATGTCCTT pmpA 789861 - 792788 + | polymorphic outer membrane protein TERM 986 792836 - 792869 + F 100 -19.9 -4.6575 | opp_overlap 792841 CTCTGTATCTTCCTA GTAAATTAGGCAAGG AATA CCTTGCCTAATTTAC TTTTCTGATTTATCT TERM 987 792864 - 792841 - f 100 -14 -3.72893 | opp_overlap 792836 TATCTTCCTAGTAAA TTAGGCAAGG AATA CCTTGCCTAA TTTACTTTTCTGATT TERM 988 794088 - 794128 + G 100 -13.4 -3.29947 | opp_overlap 794091 794115, overlap 794090 794091 ATCACTTTACCTTCA AAAGCTCAAGCATCTGCA GGAAA TGCAGATGCTTGGGCCTC TTCCTCTCCTCAATC TERM 989 794090 - 794126 + G 100 -16 -3.214 | opp_overlap 794091 794115, overlap 794088 794091 CACTTTACCTTCAAA AGCTCAAGCATCTGCA GGAAA TGCAGATGCTTGGGCC TCTTCCTCTCCTCAA TERM 990 794125 - 794091 - g 100 -17.3 -4.11394 | opp_overlap 794091 794090 794088, overlap 794115 ACTTTACCTTCAAAA GCTCAAGCATCTGCA GGAAA TGCAGATGCTTGGGC CTCTTCCTCTCCTCA TERM 991 794091 - 794125 + G 100 -19.5 -2.52519 | opp_overlap 794091 794115, overlap 794090 794088 ACTTTACCTTCAAAA GCTCAAGCATCTGCA GGAAA TGCAGATGCTTGGGC CTCTTCCTCTCCTCA TERM 992 795369 - 795346 - g 84 -11 -3.63991 | opp_overlap 795345 795342 795359 CAGGAGTCGCAACAA CAGCTTCAGC ACCT GCTGCAGCTG CTGCTTCCCTACAAG pmpB 792927 - 798176 + | polymorphic outer membrane protein TERM 993 798185 - 798209 + F 100 -14.3 -3.66883 | CTTCTAATTCTTTTT GGCCAGCCTCT TCA AAAGGCTGGCC TTTACGATCTCTTAA TERM 994 799273 - 799260 - g 75 -5.3 -4.86731 | TCGTCTGAAACAAAA GATAC ACAA GTATC AGAATCACCAGAATC TERM 995 800835 - 800818 - g 72 -6.3 -4.27117 | GTTCTACAACAGAAA CTCCTAC TTTA ATAGGAG GAGGTGCTATCTATG TERM 996 801894 - 801874 - g 77 -8.4 -3.93695 | opp_overlap 801886 801892 CTGAGGATTCAGAAA CTGTAAAC TCTGC GTTTACAG GAACGATTCTGTTCT pmpC 798351 - 803675 + | polymorphic outer membrane protein TERM 997 803722 - 803681 - f 72 -6 -4.45117 | gap 2, opp_overlap 803692, overlap 803683 GATATTCTAAATAAA TATCCTGGAAAGGCAGCTCT CGCA AGGGCTGCC-TTCTAGGA-A TCCCTGCCTCCAGAA TERM 998 803721 - 803683 - f 84 -11.1 -3.82628 | gap 1, opp_overlap 803692, overlap 803681 TATTCTAAATAAATA TCCTGGAAAGGCAGCTCT CGCA AGGGCTGCC-TTCTAGGA ATCCCTGCCTCCAGA TERM 999 803692 - 803713 + F 89 -12.3 -3.31461 | opp_overlap 803683 803681 TAAATATCCTGGAAA GGCAGCTCT CGCA AGGGCTGCC TTCTAGGAATCCCTG TERM 1000 803829 - 803789 - f 100 -6.1 -6.34616 | TCAAAACAAAAAAAA GACACACTTGCAGAGGTGA GGG CCACGCGAGCAAATGTGTC AGACGGAGAGAGAGG TERM 1001 804716 - 804732 + G 82 -8.1 -4.53119 | opp_overlap 804716 ACAGTCTCAACTAGA TCTTTTG GAT CAAAAGA TTTCTTCTATTGTTT CTL0672 804228 - 805058 + | metal transporter, metal-binding component TERM 1002 805283 - 805299 + G 80 -6.5 -4.82667 | overlap 805284 CGCCCTCTATCCATA GGTTGGG TTC CCCAACA TTTTTCCTATGATGC TERM 1003 805284 - 805298 + G 78 -10 -3.48877 | overlap 805283 GCCCTCTATCCATAG GTTGGG TTC CCCAAC ATTTTTCCTATGATG CTL0673 805055 - 805765 + | metal transporter, ATP-binding component TERM 1004 806128 - 806141 + GT 84 -5.3 -5.26119 | CTCCCTTCCTTTAAC TCAGA GCTC TCTGA TTTTCTTTTTGGCAA TERM 1005 806157 - 806182 + GT 70 -4.7 -4.56702 | opp_overlap 806159, overlap 806159 TTTTCTTTTTGGCAA TATCTTATGGG TCAC CCCACAAGATC TTTATTTCCTTGGGA TERM 1006 806180 - 806159 - gT 73 -9.5 -3.01712 | opp_overlap 806157 806159 TTCTTTTTGGCAATA TCTTATGGG TCAC CCCACAAGA TCTTTATTTCCTTGG TERM 1007 806159 - 806180 + GT 72 -7.3 -3.88884 | opp_overlap 806159, overlap 806157 TTCTTTTTGGCAATA TCTTATGGG TCAC CCCACAAGA TCTTTATTTCCTTGG CTL0675 807560 - 806553 - | GTPase ObgE CTL0674 805756 - 806637 + | metal transporter, membrane permease component TERM 1008 807122 - 807139 + gT 81 -11.3 -2.84841 | opp_overlap 807119, overlap 807119 807118 CAACCAAGCGAATTT CTCCAGG TTTA CCTGGAG TAGCTTTTGTTGGAG TERM 1009 807618 - 807587 - TR 100 -6.7 -6.08342 | GAACAAACAAAAAAA GCCCTATTTTTAC GCGTAG GCAAAAACAGAGC TTGAACAAACTGAAT rpmA 807901 - 807650 - | 50S ribosomal protein L27 rplU 808255 - 807932 - | 50S ribosomal protein L21 TERM 1010 808537 - 808507 - H 100 -10.7 -5.60993 | TCTGTCACAAAAAAA TTTAGAGAGTTCT CCGTC AAAACTCTCTAAA CGCCATTAGCGGACA CTL0678 808805 - 809506 + | putative inner membrane protein TERM 1011 809613 - 809632 + F 72 -2.1 -5.2853 | opp_overlap 809615 809619, overlap 809595 809615 TTCTGTTCCTTTCAT AAGCAAC AGCAGA GTTGCTA TTTTCTTTTTAAATC CTL0679 809691 - 809852 + | hypothetical protein CTL0680 809869 - 810030 + | hypothetical protein TERM 1012 810087 - 810141 + G 73 -5.3 -4.59773 | opp_overlap 810091 810109, overlap 810088 AATTTTTATTTCTAA C-GAACAACAAGATGTTAGCATAGATT TAC AATCTGCTC-AGCGTCTTGTTGTTCTG TTTTTGGAACTACAA TERM 1013 810088 - 810139 + G 80 -9 -3.91506 | gap 1, opp_overlap 810091 810109, overlap 810087 ATTTTTATTTCTAAC GAACAACAAGATGTTAGCATAGATT TAC AATCTGCTC-AGCGTCTTGTTGTTC TGTTTTTGGAACTAC CTL0681 810043 - 810528 + | hypothetical protein CTL0682 810661 - 811770 + | putative cation efflux protein rsbV 811959 - 812309 + | anti-sigma F factor antagonist TERM 1014 812929 - 812913 - g 78 -9.5 -3.68827 | GACCCATCAGGGAAA GGATCTT TTG AAGATCC CGATATCTTCACAAT CTL0684 812487 - 814352 + | hypothetical protein CTL0685 814549 - 815658 + | hypothetical protein CTL0686 815631 - 816452 + | hypothetical protein ubiE 816388 - 817077 + | ubiquinone/menaquinone biosynthesis methyltransferase CTL0688 818092 - 817103 - | hypothetical protein TERM 1015 817300 - 817321 + g 83 -8.7 -4.0847 | overlap 817301 817316 817316 CTTCCAGACGCCCTC CTCCTCGCA AGTG TGCGAGGAA TTCTTCTTCTGTATC TERM 1016 817301 - 817320 + g 86 -12.2 -3.03998 | overlap 817300 817316 817316 TTCCAGACGCCCTCC TCCTCGCA AGTG TGCGAGGA ATTCTTCTTCTGTAT TERM 1017 817474 - 817485 + g 73 -5.8 -4.56775 | overlap 817481 TTGCCGACTGTTTAG GAGG TCGC CCTC TTTTTGGACGAGGGT dapF 818980 - 818153 - | diaminopimelate epimerase TERM 1018 818763 - 818723 - GR 75 -9 -3.66356 | gap 1, overlap 818726 ATCTTCAAGTCCAAA GCACTGGGCTAC-GTGCGC CATT GCGCACCGCAACCCATTCC CGCACATAGACGCGA TERM 1019 818760 - 818726 - GR 73 -9.3 -2.94412 | gap 1, overlap 818723 TTCAAGTCCAAAGCA CTGGGCTAC-GTGCGC CATT GCGCACCGCAACCCAT TCCCGCACATAGACG clpP 819527 - 818949 - | ATP-dependent Clp protease proteolytic subunit glyA 821032 - 819539 - | serine hydroxymethyltransferase TERM 1020 820528 - 820543 + g 86 -9 -4.36411 | GGCCTAGGCATTTGT GCTGAG CCAT CTCAGC TTTTAATGCTTCGTA TERM 1021 821160 - 821146 - H 70 -7.2 -3.74749 | ATGAGAAAGTCTAAA CTTTCT AGG AGAAAG AGGATTTATTTTAAC TERM 1022 821205 - 821193 - H 76 -4.1 -5.24416 | TAACTACAAGAAAAA GAAAC GAT GCTTC CAAGACCATTACCAA CTL0692 821396 - 822067 + | uroporphyrinogen-III synthase TERM 1023 822096 - 822123 + F 72 -8.6 -3.28785 | opp_overlap 822096, overlap 822092 ATTTATTTTAATGAA GATCTCTTCA AGAAGTTG TGAAGAGATC TTACCTCTTTTAGAG TERM 1024 822123 - 822096 - f 72 -8.6 -3.35992 | opp_overlap 822096 822092 ATTTATTTTAATGAA GATCTCTTCA AGAAGTTG TGAAGAGATC TTACCTCTTTTAGAG ispF 822170 - 822706 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CTL0694 823755 - 822703 - | putative oxidoreductase TERM 1025 823735 - 823697 - G 100 -14.9 -3.63515 | gap 1, opp_overlap 823696 823701, overlap 823701 TCCGATGTGGAAGAA CAAAGCTCACGTGAATGT AAAA ACATCCAC-TGAGCTTTG AATTTAGAAAATAAA TERM 1026 823731 - 823701 - G 100 -9.9 -4.45068 | gap 1, opp_overlap 823696 823701, overlap 823697 ATGTGGAAGAACAAA GCTCACGTGAATGT AAAA ACATCCAC-TGAGC TTTGAATTTAGAAAA TERM 1027 823701 - 823731 + g 72 -7.7 -3.84451 | gap 1, opp_overlap 823701 823697, overlap 823696 ATGTGGAAGAACAAA GCTCACGTGAATGT AAAA ACATCCAC-TGAGC TTTGAATTTAGAAAA rpsJ 824089 - 823772 - | 30S ribosomal protein S10 TERM 1028 824059 - 824070 + g 71 -3 -4.92756 | CAAAACCTTTCAAGC GAAT CCGA ATTC TTTGTTTTTGCTGCT fusA 826181 - 824097 - | elongation factor G rpsG 826696 - 826223 - | 30S ribosomal protein S7 rpsL 827135 - 826746 - | 30S ribosomal protein S12 CTL0699 827377 - 827715 + | hypothetical protein TERM 1029 827747 - 827691 - f 73 -7 -4.19177 | overlap 827707 ATTTTCCAATATAAA TTTTCTTGTCACAAAAGAAAAATAAC CCTCC GTTACCTTTCCTTTCTGAGAAAAAAA AGTTTTTTTTCAGAG TERM 1030 828304 - 828293 - g 81 -4.4 -5.28778 | ACTATTGAGAAAAAA CCAA GCGC TTGG GCTTCTTCAATTGAA TERM 1031 829682 - 829672 - g 81 -4 -5.40474 | ACGTCTTGAAAAAAA CAAA AAC TTTG AGATTTTTGTCCAAC TERM 1032 829733 - 829710 - g 78 -2.4 -5.46629 | AACACTTGAAAAAAA CAAACAAACA GGAT CGATCGTTTG GAAGCAACGATCTGC tsp 827873 - 829822 + | carboxy-terminal processing protease TERM 1033 829855 - 829825 - T 72 -5.3 -4.65916 | opp_overlap 829828, overlap 829826 829827 TCCAGCTCAATAAAA TCTGGGAGGAGGA CTCTT TCCTCCTCCCTTT CCATACATCATCTGT TERM 1034 829854 - 829826 - T 74 -8.8 -3.39068 | opp_overlap 829828, overlap 829825 829827 CCAGCTCAATAAAAT CTGGGAGGAGGA CTCTT TCCTCCTCCCTT TCCATACATCATCTG TERM 1035 829853 - 829827 - T 85 -12.3 -2.62958 | opp_overlap 829828, overlap 829826 829825 CAGCTCAATAAAATC TGGGAGGAGGA CTCTT TCCTCCTCCCT TTCCATACATCATCT TERM 1036 829828 - 829852 + T 100 -15.8 -3.67296 | opp_overlap 829827 829826 829825 AGCTCAATAAAATCT GGGAGGAGGA CTCTT TCCTCCTCCC TTTCCATACATCATC crpA 830381 - 829929 - | cysteine-rich membrane protein TERM 1037 830533 - 830510 - R 100 -16 -5.9218 | TAGATAACAAAAAAA GCCGCCCAGG AATC CCTGGACGGC ACCTACACATCGATA omcB 832220 - 830559 - | 60kD cysteine-rich outer membrane protein TERM 1038 832293 - 832338 + r 100 -13.5 -3.36505 | opp_overlap 832299, overlap 832295 832298 ACATTTTCTTGTTAG CCGAAATAGTTAGTAAGGAAG CCAA CTTCCTTACTAACTACATCTG TTGTGGGTAGGCTCT TERM 1039 832295 - 832336 + r 100 -14.7 -3.25102 | opp_overlap 832299, overlap 832293 832298 ATTTTCTTGTTAGCC GAAATAGTTAGTAAGGAAG CCAA CTTCCTTACTAACTACATC TGTTGTGGGTAGGCT TERM 1040 832298 - 832333 + r 100 -15 -2.51045 | opp_overlap 832299, overlap 832295 832293 TTCTTGTTAGCCGAA ATAGTTAGTAAGGAAG CCAA CTTCCTTACTAACTAC ATCTGTTGTGGGTAG TERM 1041 832332 - 832299 - R 100 -18.5 -3.59979 | opp_overlap 832298 832295 832293 TCTTGTTAGCCGAAA TAGTTAGTAAGGAAG CCAA CTTCCTTACTAACTA CATCTGTTGTGGGTA omcA 832633 - 832367 - | cysteine-rich outer membrane protein TERM 1042 832636 - 832670 + H 79 -6.5 -4.7878 | opp_overlap 832636 CAGTTTTTTTCATAA CTTCCAGACTCCTTT CTAGA AAAGGGCTCTTGAAG TTTCTTTTATCGATA CTL0704 832970 - 833194 + | putative lipoprotein gltX 834711 - 833191 - | glutamyl-tRNA synthetase TERM 1043 834761 - 834771 + r 70 -8.2 -3.31269 | opp_overlap 834760 834758 834761, overlap 834767 TTATGAAATGAACAC CCCG TCC CGGG TTCCTGTCCTATGAA TERM 1044 834940 - 834911 - R 100 -19.3 -6.09888 | opp_overlap 834931 TTTCAACAAAAAAAA GAGCCCCCTCCGG AATT CCGGAGGAGGCCC AAGCTCTCCCCTGCT euo 835533 - 834982 - | hypothetical protein recJ 837691 - 835937 - | single-stranded-DNA-specific exonuclease TERM 1045 837090 - 837107 + g 73 -3.5 -5.06585 | overlap 837097 CCTACTCCTGTAAGC TCTTTAT TTGG ATAAGGA TTTTTATCTAATTTA TERM 1046 837754 - 837726 - R 100 -7.4 -5.75342 | overlap 837728 TCCTGTTAAAAAAAA GCTCCCTCCTTC TTTAG GAGGAAAGGAGC CCCATAATCATCCCA secF 842011 - 837809 - | bifunctional preprotein translocase subunit SecD/SecF TERM 1047 839000 - 839012 + g 74 -4.8 -4.86001 | opp_overlap 839000 ATTAGAGTCAAAAAT GGCA CTGAA TGCC TTTTTATAACCTGCT TERM 1048 842436 - 842407 - R 71 -6.5 -4.03885 | opp_overlap 842416 TTCTAAAAAAATCAA CAGCAAACTGTTT CTCA AAACTGCTTACTG AATAGGCGCTTCAGA CTL0709 842763 - 842431 - | hypothetical protein uppS 843225 - 843986 + | undecaprenyl pyrophosphate synthetase cdsA 843992 - 844909 + | phosphatidate cytidylyltransferase cmk 844906 - 845556 + | cytidylate kinase plsC 845553 - 846203 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase argS 846218 - 847909 + | arginyl-tRNA synthetase TERM 1049 847957 - 847914 - T 95 -14.2 -3.08073 | gap 1, overlap 847918 847920 847954 847956 ATCACCTGTAACATA TGAATATTTAAGGGAAG-CTC TTC GAGTCTTCCCTTAAACATACA CAGATACTGCGTCTC TERM 1050 847953 - 847918 - T 100 -13.6 -3.37493 | gap 1, overlap 847914 847920 CCTGTAACATATGAA TATTTAAGGGAAG-CTC TTC GAGTCTTCCCTTAAACA TACACAGATACTGCG TERM 1051 847951 - 847920 - T 100 -14 -3.25475 | gap 1, overlap 847918 847914 TGTAACATATGAATA TTTAAGGGAAG-CTC TTC GAGTCTTCCCTTAAA CATACACAGATACTG murA 849281 - 847947 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 1052 848961 - 848951 - G 75 -3.2 -5.20606 | AAATAGGAACAAAAA TCCC ATA AGGA CAACGACGTAACAAC TERM 1053 849413 - 849387 - H 95 -12.6 -3.27984 | overlap 849385 849383 ATTAACAAAGAGACA TTTGTTTGTTTT TAA AAAACAAACAAA AATAAACTTTGTAGC TERM 1054 849566 - 849585 + G 74 -7.8 -3.95183 | overlap 849581 ACTTCGGCATCAGGT GCTTCCGG ATCT CTGGGAGC TTCTTCTGTATCTAC tarp 849494 - 852511 + | translocated actin-recruiting phosphoprotein TERM 1055 852557 - 852528 - T 83 -10.8 -3.39384 | overlap 852526 852530 AAGCAAAGGAGAACA GACGAGCAGAAC AGATAA GTTCTGCTCGTG AATGCCTAAGCCATA TERM 1056 852555 - 852530 - T 100 -13.4 -3.25207 | overlap 852528 852526 GCAAAGGAGAACAGA CGAGCAGAAC AGATAA GTTCTGCTCG TGAATGCCTAAGCCA CTL0717 853279 - 852563 - | hypothetical protein CTL0718 853965 - 853462 - | ribosomal-protein-alanine acetyltransferase prfB 855069 - 853962 - | peptide chain release factor 2 CTL0720 855389 - 855649 + | hypothetical protein TERM 1057 855666 - 855696 + F 76 -9 -3.78633 | overlap 855669 ATAGAAATTGACTCA CGTGTTCCTCGTCT TTA AGATGAGGAACTAG TTCATTCTTTTTGTT TERM 1058 855669 - 855693 + F 95 -13.7 -2.94669 | overlap 855666 GAAATTGACTCACGT GTTCCTCGTCT TTA AGATGAGGAAC TAGTTCATTCTTTTT TERM 1059 856095 - 856117 + G 73 -10.6 -2.50443 | overlap 856094 ATTACGCCACCTACG TATCCCGTGA TAT TCACGGGAAA ATTAATACCATCTCA TERM 1060 856433 - 856463 + G 73 -3.9 -5.00884 | overlap 856436 AATCCCGATACGATT CACCATCTCCAAG ATTAC CCTGGTGATGTTG TTTTTTCCGGGCACT CTL0721 855707 - 856696 + | putative metallo-phosphoesterase ispD 856686 - 857345 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 1061 857377 - 857367 - g 100 -4 -5.9873 | CCATGACAAAAAAAA TTGT TTT ACAA ATCGCTTATCAAGGA truA 857354 - 858157 + | tRNA pseudouridine synthase A CTL0724 858783 - 858109 - | HAD superfamily hydrolase CTL0725 858876 - 859517 + | hypothetical protein TERM 1062 859597 - 859625 + F 79 -9 -4.09864 | AAGGATATTTCCTGT CAGGGGAAGAAA CTCTA TTTCTTCTTCTG TTTTCAGACCTAGAT CTL0726 859811 - 860140 + | hypothetical protein TERM 1063 860767 - 860755 - g 73 -2.7 -5.10064 | overlap 860749 TTGAATATACAAAAA TTCAA CCT CTGAA CCTTCGTTCTATAGA atoS 860118 - 861176 + | two component regulator, histidine kinase TERM 1064 862255 - 862229 - g 80 -8.8 -4.03167 | TAAGATGAATAATAA GCCTCCAAAAAC ATT GTCTTTAGAAGC GCAAAGAAATCTTTT atoC 861219 - 862379 + | two component system response regulator CTL0729 862606 - 863142 + | hypothetical protein recO 863112 - 863843 + | DNA repair protein RecO CTL0731 864442 - 863840 - | hypothetical protein CTL0733 864920 - 865714 + | hypothetical protein CTL0735 866902 - 865973 - | hypothetical protein CTL0734 865720 - 866034 + | hypothetical protein TERM 1065 866205 - 866178 - Gf 70 -5.6 -4.386 | gap 1, opp_overlap 866200, overlap 866200 TAAGCTTTCAGAAAA CAGCG-CCTCTGA TGA TCAGAAATCGCCG TTTGACGATTTTCTA pheT 866990 - 869362 + | phenylalanyl-tRNA synthetase subunit beta CTL0737 869359 - 870324 + | hypothetical protein CTL0738 870343 - 870855 + | putative DNA methyltransferase oppC2 872588 - 870852 - | oligonucleotide transport system permease TERM 1066 871054 - 871039 - G 78 -4 -5.09426 | gap 1 CCTAACCCTAAAAAA GTG-AGC CCT GCTTCAC AGCTAATCATAGCCA TERM 1067 871657 - 871633 - G 79 -10.9 -3.05384 | opp_overlap 871628 871655 TCGGTTTCTATCCAA TTACGCTTATC CAT GATAAACGTAA TCGAATTATTTAAAG TERM 1068 872379 - 872364 - G 76 -2.6 -5.27399 | TAAGACATTAAAAAA TAAATC GATA GACTTA GTGTAAAAACCTGGG oppB2 874005 - 872590 - | oligopeptide transport system membrane permease TERM 1069 873349 - 873330 - G 84 -10 -3.90318 | opp_overlap 873330 TGATCACTTCAGAAA CGACCGTC TTAT GACAGTCG TTGCGTAACGTTCCA oppA4 876140 - 874050 - | oligopeptide transport system, binding protein TERM 1070 875864 - 875845 - G 71 -5 -4.63218 | CCTTTCGGAACAAAA CCTTCCTT TAAC AACGAAGG GACCACTTTTTCAAC TERM 1071 876357 - 876378 + r 90 -11.7 -4.07885 | opp_overlap 876357 TTTAAGAAAAAAAAA GAGAGTTGA AAAT TCAACTCTC TTTTAGAAAAAACTA TERM 1072 876378 - 876357 - R 100 -11.7 -6.36459 | opp_overlap 876357 TTTAAGAAAAAAAAA GAGAGTTGA AAAT TCAACTCTC TTTTAGAAAAAACTA TERM 1073 876401 - 876391 - R 76 -4 -5.24129 | CTCTTTTAGAAAAAA CTAT CGA ATAG GATCTCTAGTTTCTT TERM 1074 876482 - 876453 - R 79 -8.8 -3.97331 | opp_overlap 876453 876458, overlap 876458 AAGCTAGGGAAACAA CTAAAGAAGAAA CTTCTT TTTCTTCTTCAG TCTCATCAGCGTAAA TERM 1075 876458 - 876468 + r 81 -5.4 -5.30348 | opp_overlap 876458 876453, overlap 876453 AGGGAAACAACTAAA GAAG AAA CTTC TTTTTCTTCTTCAGT CTL0742 877477 - 876746 - | hypothetical protein CTL0743 878292 - 877639 - | hypothetical protein TERM 1076 879004 - 879015 + G 78 -2.2 -5.42131 | TCTCTATTCGCCCTT TGGC GACA GCTA TTTTTTCTGTGATTG CTL0744 878760 - 879125 + | hypothetical protein CTL0745 880102 - 879104 - | hypothetical protein TERM 1077 879718 - 879706 - G 80 -2.7 -5.43621 | ATAAATTACAAAAAA CAAAA TAC TCTTG ATTTTGCATTACCAG hemZ 881203 - 880259 - | ferrochelatase TERM 1078 880738 - 880709 - G 86 -11.5 -3.35597 | overlap 880707 CTGAGCGGCTAAACA GTCTCGAATATGC TGTT GCATACACGAGAC AAACTGAGGATGCAC TERM 1079 881016 - 880999 - G 77 -6.3 -4.59773 | CTGTATCTTGAAAAA TAGGAGA TCCC CCTCCTA AATAAGCGTATTGTC fliY 882010 - 881225 - | glutamine-binding protein CTL0748 882628 - 882056 - | methyltransferase TERM 1080 882596 - 882585 - G 74 -4.4 -4.9218 | opp_overlap 882585 GAGGGATTAGAAAAA GTCT TTAA AGAC TTCCCTTTGAATTTA CTL0749 883359 - 882625 - | putative phosphohydrolase glgC 884773 - 883448 - | glucose-1-phosphate adenylyltransferase CTL0751 884965 - 885216 + | hypothetical protein rho 886620 - 885226 - | transcription termination factor Rho TERM 1081 886471 - 886496 + g 71 -4.7 -4.70921 | CTGTAGTTTAGCAAT CTTCGTAACTG CTAC TGGTTGCGAGG TTTCTTTCTCTTCTG CTL0753 887225 - 886617 - | dephospho-CoA kinase polA 889819 - 887219 - | DNA polymerase I TERM 1082 888861 - 888849 - G 80 -9.1 -3.92542 | TGTAGCTGCAAAGAA GGGAG ATG CTCCC CAGTATAAGCCGCAC sohB 890831 - 889836 - | exported protease IV TERM 1083 890730 - 890705 - G 71 -3.3 -5.01553 | gap 1 AATTGACAAACAAAA CTCCGTCTCCCG CCC CAAGA-ACAGAG GCCGATAGGACAAAA TERM 1084 890961 - 890925 - R 100 -10.3 -5.63517 | opp_overlap 890931, overlap 890926 890931 TTTTTAAATAAAAAA TTAAAAGACCTGGAATA CTA TACTCCAGGTCTTTTTC TTCTCAAGACTATAA TERM 1085 890960 - 890926 - R 100 -13.8 -3.97026 | opp_overlap 890931, overlap 890925 890931 TTTTAAATAAAAAAT TAAAAGACCTGGAATA CTA TACTCCAGGTCTTTTT CTTCTCAAGACTATA TERM 1086 890955 - 890931 - R 100 -13.7 -4.9251 | opp_overlap 890931, overlap 890926 890925 AATAAAAAATTAAAA GACCTGGAATA CTA TACTCCAGGTC TTTTTCTTCTCAAGA TERM 1087 890931 - 890955 + r 100 -11.5 -5.18726 | opp_overlap 890931 890926 890925 AATAAAAAATTAAAA GACCTGGAATA CTA TACTCCAGGTC TTTTTCTTCTCAAGA CTL0756 892593 - 890971 - | putative nucleotide transport protein pgsA 893311 - 892805 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1088 892962 - 892952 - G 78 -4 -5.11937 | AACAACTGTAAAAAA CTTT CCA AAAG ACAATGCTCTGTAAT CTL0758 893856 - 893707 - | hypothetical protein TERM 1089 894591 - 894602 + GH 81 -4.4 -5.26875 | GTTTTGATAGCCGGC TTCC TGTA GGAA TTTTTTCATTAGAGA dnaB 893825 - 895243 + | replicative DNA helicase TERM 1090 895364 - 895329 - fH 89 -6.1 -5.61596 | opp_overlap 895327 895339 ACTTTGAGAAAAAAA CCTATGAGGATCGGG TGCTTG CTCGATTCTCCTAGG CATTAGCTGAGTCTT gidA 895538 - 897370 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA lplA 897360 - 898061 + | lipoate-protein ligase A TERM 1091 898099 - 898069 - T 100 -17.6 -6.22802 | overlap 898071 TCCTATAAAAAAAAA CACCCCCCTCTGCA CGG TGCAGAGGGGGGCT TGCACAATCTCAAAA TERM 1092 898097 - 898071 - T 100 -22.4 -4.76409 | overlap 898069 CTATAAAAAAAAACA CCCCCCTCTGCA CGG TGCAGAGGGGGG CTTGCACAATCTCAA ndk 898543 - 898118 - | nucleoside diphosphate kinase ruvA 899305 - 898703 - | Holliday junction DNA helicase motor protein TERM 1093 898931 - 898944 + g 84 -3.8 -5.50499 | TTTAAGATCCACCAT CAGC TTTTCT GCTG TTTTTTTCCCTATCC ruvC 899837 - 899325 - | Holliday junction resolvase CTL0765 900394 - 899945 - | hypothetical protein TERM 1094 900699 - 900672 - R 100 -12 -4.7373 | overlap 900673 CCATCTGAGCAAAAA CGACGAGGACCC TAAA GAGTCCTCGCCA CAGCTTTACAAGAAG TERM 1095 900698 - 900673 - R 100 -13.3 -3.43756 | overlap 900672 CATCTGAGCAAAAAC GACGAGGACCC TAAA GAGTCCTCGCC ACAGCTTTACAAGAA CTL0766 901652 - 900786 - | hypothetical protein gapA 902667 - 901663 - | glyceraldehyde 3-phosphate dehydrogenase TERM 1096 902719 - 902702 - R 79 -7.1 -4.56775 | AGTGTTTTCGAAAAA TTAGCAT CACT ATGCTAA AAATTCTATGATACA rplQ 903136 - 902711 - | 50S ribosomal protein L17 rpoA 904278 - 903145 - | DNA-directed RNA polymerase subunit alpha rpsK 904697 - 904299 - | 30S ribosomal protein S11 rpsM 905087 - 904719 - | 30S ribosomal protein S13 secY 906516 - 905143 - | preprotein translocase subunit SecY rplO 906973 - 906539 - | 50S ribosomal protein L15 TERM 1097 906925 - 906947 + g 72 -9.2 -3.22102 | overlap 906924 GGCCCAAGAGTTTCG TTCTTCGCTT ACG AGGCGAAGGA TCTTGTAAACACTCT rpsE 907463 - 906966 - | 30S ribosomal protein S5 rplR 907849 - 907478 - | 50S ribosomal protein L18 rplF 908422 - 907871 - | 50S ribosomal protein L6 rpsH 908851 - 908450 - | 30S ribosomal protein S8 TERM 1098 908654 - 908684 + g 75 -3.4 -5.10656 | gap 1, opp_overlap 908663, overlap 908655 ACGATCTTCCCCGTA CCGCAAAAAGACT CTCATT AGTCTTTT-GCGA TTTTCTTCTTTTACT rplE 909411 - 908869 - | 50S ribosomal protein L5 rplX 909748 - 909413 - | 50S ribosomal protein L24 TERM 1099 909729 - 909717 - G 70 -7.7 -3.66117 | overlap 909715 GCAAGCACATAAACA GTGTC ACC GACAC AAACACTACGTCTCT rplN 910129 - 909761 - | 50S ribosomal protein L14 rpsQ 910397 - 910146 - | 30S ribosomal protein S17 rpmC 910608 - 910390 - | 50S ribosomal protein L29 rplP 911026 - 910610 - | 50S ribosomal protein L16 TERM 1100 910739 - 910725 - G 74 -7.8 -3.93768 | overlap 910723 910726 ACTTCGAATAAAATA CGTCCG GGA CGGACA ACAGCTACCCAGTGA rpsC 911733 - 911059 - | 30S ribosomal protein S3 rplV 912078 - 911743 - | 50S ribosomal protein L22 rpsS 912363 - 912097 - | 30S ribosomal protein S19 rplB 913223 - 912369 - | 50S ribosomal protein L2 TERM 1101 913074 - 913095 + g 75 -2.3 -5.27335 | ATCTCGCCCTCCAGA GCTCTTTTT GAAA AAAGAAAGC TTTTTATTTGGACGA rplW 913582 - 913247 - | 50S ribosomal protein L23 TERM 1102 913471 - 913483 + g 71 -3.3 -4.91473 | overlap 913472 TGTACTTAGGATCTT TGCAG AAA CTGCC TTTCTTTTTACCTTC rplD 914266 - 913598 - | 50S ribosomal protein L4 TERM 1103 914047 - 914063 + g 70 -9.4 -2.74094 | overlap 914046 914045 914049 CTGCCAAGCAACCCT GACGGG CATTC CCCGTC CCTTTTTGTCTAAAA TERM 1104 914254 - 914244 - G 71 -4 -4.82901 | TCTTTTCCAGAAAAA TCAA ATT TTGA TAATAGAACCATTAG rplC 914940 - 914275 - | 50S ribosomal protein L3 TERM 1105 914886 - 914908 + g 74 -4.8 -4.74706 | opp_overlap 914890 914892, overlap 914887 GATTTCCATTCTTAT CGAAGACATG CAT CATGCCTTCC TTTTTCCCTATTAGG TERM 1106 914887 - 914907 + g 71 -8.3 -3.441 | opp_overlap 914890 914892, overlap 914886 ATTTCCATTCTTATC GAAGACATG CAT CATGCCTTC CTTTTTCCCTATTAG TERM 1107 915324 - 915347 + r 100 -14 -5.06816 | opp_overlap 915324 TTTGTAGATAAAAAA GGCTGTTTCT TTTT AGAAACAGCC TTTTTCTTAAGAAAT TERM 1108 915347 - 915324 - R 100 -14 -5.36441 | opp_overlap 915324 TTTGTAGATAAAAAA GGCTGTTTCT TTTT AGAAACAGCC TTTTTCTTAAGAAAT CTL0791 916271 - 915375 - | hypothetical protein TERM 1109 916037 - 916021 - G 83 -10.9 -3.5594 | AAGGCATTCCCTAAA GCGAGAA CAG TTCTCGC ATCCCCTAATCCTTT fmt 917387 - 916437 - | methionyl-tRNA formyltransferase TERM 1110 916630 - 916655 + g 88 -11.1 -3.76125 | gap 1, opp_overlap 916634, overlap 916634 GATTCCATTCTAGCA GAGAGCACGCCG AGA CGGCGAGC-CTC TTTCCCTTGGGATAG TERM 1111 916652 - 916634 - G 83 -11.6 -2.94747 | opp_overlap 916630 916634 CCATTCTAGCAGAGA GCACGCCG AGA CGGCGAGC CTCTTTCCCTTGGGA TERM 1112 916634 - 916652 + g 80 -11.6 -2.6732 | opp_overlap 916634, overlap 916630 CCATTCTAGCAGAGA GCACGCCG AGA CGGCGAGC CTCTTTCCCTTGGGA lpxA 918219 - 917377 - | UDP-N-acetylglucosamine acyltransferase fabZ 918692 - 918231 - | (3R)-hydroxymyristoyl-ACP dehydratase lpxC 919549 - 918689 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase cutE 921277 - 919649 - | apolipoprotein N-acyltransferase CTL0797 921823 - 921341 - | acyl-CoA hydrolase dnaQ2 922711 - 921959 - | DNA polymerase III subunit epsilon CTL0799 923188 - 922715 - | putative nucleotide-binding protein CTL0800 923883 - 923167 - | hypothetical protein TERM 1113 923833 - 923853 + g 76 -2.6 -5.34309 | overlap 923839 TTCTGGGGATTTTTG CTTTTTCA AAAAC TGGAGAAG TTTTTGTTTGATACT trxA 924605 - 924913 + | thioredoxin TERM 1114 924952 - 924934 - T 100 -14.6 -4.36914 | opp_overlap 924928 CTCTTCTCTAGAAAA GGCCGAGA AAT TCTCGGCC TTAACATGATTCAAA CTL0802 925418 - 924963 - | SpoU family rRNA methylase TERM 1115 925202 - 925226 + g 72 -8 -3.7941 | gap 1, opp_overlap 925200 925201 925225 TTAGACAAAAAATGC GCTC-TTTAGG CACC CCTAAAAGAGC TTCTTCTAAAGAATC TERM 1116 925350 - 925315 - G 100 -9.1 -5.27335 | overlap 925316 925317 925320 TCTGCTAAAGAAAAA CCTAAGGGCCGAACT AATATA AGTTCAGCCCCTAAA GCCACACATGTCCTA TERM 1117 925349 - 925316 - G 86 -10.4 -3.75678 | overlap 925315 925317 925320 CTGCTAAAGAAAAAC CTAAGGGCCGAACT AATATA AGTTCAGCCCCTAA AGCCACACATGTCCT TERM 1118 925348 - 925317 - G 81 -11.7 -2.84684 | overlap 925316 925315 925320 TGCTAAAGAAAAACC TAAGGGCCGAACT AATATA AGTTCAGCCCCTA AAGCCACACATGTCC TERM 1119 925345 - 925320 - G 83 -11.2 -3.54768 | overlap 925317 925316 925315 TAAAGAAAAACCTAA GGGCCGAACT AATATA AGTTCAGCCC CTAAAGCCACACATG mip 926165 - 925434 - | peptidyl-prolyl cis-trans isomerase aspS 928051 - 926303 - | aspartyl-tRNA synthetase hisS 929318 - 928032 - | histidyl-tRNA synthetase TERM 1120 929305 - 929294 - G 73 -3.6 -5.02231 | opp_overlap 929304, overlap 929288 GAAAAATATCAAAAA CGCC TTTT GGCA ATGCATTACTCATTG TERM 1121 930941 - 930921 - g 71 -2.4 -5.24129 | opp_overlap 930921 TTGTCTCATAAAAAA GCAGCTGG AACGG CTAGCGGC TTTACAGGATGGTTC uhpC 929754 - 931124 + | putative sugar phosphate permease TERM 1122 931270 - 931230 - g 86 -11.9 -3.0873 | opp_overlap 931231 931235, overlap 931235 CAAAGCAGTGGAATA TCAAATTCCCGCGCTCGCT CTT ACCGATCACGGGAATTTGT TTGGCGCGGTCGAAT TERM 1123 931231 - 931269 + G 100 -13.2 -3.54424 | opp_overlap 931230 931235, overlap 931235 AAAGCAGTGGAATAT CAAATTCCCGCGCTCGCT CTT ACCGATCACGGGAATTTG TTTGGCGCGGTCGAA TERM 1124 931265 - 931235 - g 89 -10.4 -3.93038 | opp_overlap 931231 931235, overlap 931230 CAGTGGAATATCAAA TTCCCGCGCTCGCT CTT ACCGATCACGGGAA TTTGTTTGGCGCGGT TERM 1125 931235 - 931265 + G 87 -8.2 -4.41616 | opp_overlap 931235 931230, overlap 931231 CAGTGGAATATCAAA TTCCCGCGCTCGCT CTT ACCGATCACGGGAA TTTGTTTGGCGCGGT TERM 1126 933278 - 933298 + G 70 -7.7 -3.60151 | opp_overlap 933278 CTCTCATGGAACCTA TTCTAAAAG AAA CTTTTGGAA TTATGGTTTACCAAG TERM 1127 933414 - 933397 - g 82 -5.6 -5.03314 | GCTATGGGGAAAAAA GACCAT GAACAG ATGGTC AAGGAACGAGAGAAA TERM 1128 934293 - 934271 - g 79 -7.8 -4.31692 | opp_overlap 934271 AAGTCACTACTAAAA TTTCCTCTGC AGA GCAGAAAAAA TTTGCACTTTTACAA dnaE 931138 - 934851 + | DNA polymerase III subunit alpha TERM 1129 934980 - 935029 + T 74 -10.1 -2.87211 | gap 1, opp_overlap 934993 934994, overlap 934993 934994 CTAAAAAATTTTGAG GCTCTCTAGCAAACGAAGGCGGAG CTA CTCCACCTTCATTT-CAAGAGAGA TCTATGAAAAAAGCT TERM 1130 934993 - 935017 + T 71 -8.5 -3.53563 | opp_overlap 934993 934994, overlap 934980 934994 AGGCTCTCTAGCAAA CGAAGGCGGAG CTA CTCCACCTTCA TTTCAAGAGAGATCT TERM 1131 935017 - 934993 - T 95 -12.9 -3.72695 | opp_overlap 934980 934993 934994, overlap 934994 AGGCTCTCTAGCAAA CGAAGGCGGAG CTA CTCCACCTTCA TTTCAAGAGAGATCT TERM 1132 934994 - 935016 + T 85 -12 -2.71924 | opp_overlap 934993 934994, overlap 934993 934980 GGCTCTCTAGCAAAC GAAGGCGGAG CTA CTCCACCTTC ATTTCAAGAGAGATC TERM 1133 935016 - 934994 - T 95 -14.2 -2.83403 | opp_overlap 934994 934993 934980, overlap 934993 GGCTCTCTAGCAAAC GAAGGCGGAG CTA CTCCACCTTC ATTTCAAGAGAGATC CTL0808 935949 - 935080 - | hypothetical protein TERM 1134 935900 - 935888 - G 70 -7.7 -3.65224 | ATTCTATGTGAATAA GGGAT CTT ATCCC AAAACACAATAGAAC TERM 1135 936033 - 936050 + H 85 -2.7 -5.8096 | opp_overlap 936033 AAACAAAAGCTATAA GAGATTT GACA AATTCTC TTTTTCTTTTTTATG CTL0809 936101 - 937057 + | hypothetical protein CTL0810 937082 - 937666 + | hypothetical protein rsbW 937653 - 938093 + | sigma regulatory factor-histidine kinase TERM 1136 938113 - 938138 + T 70 -2.5 -5.05601 | gap 1, overlap 938116 938118 ATCTATCCATCTATT GAA-GGCGGGCG TAA TGCCCGTAATTC TTTTTCTGTATCCTG TERM 1137 938118 - 938132 + T 75 -9.2 -3.21909 | overlap 938116 938113 TCCATCTATTGAAGG CGGGCG TAA TGCCCG TAATTCTTTTTCTGT CTL0812 938525 - 938100 - | hypothetical protein TERM 1138 939428 - 939399 - g 73 -3.6 -4.99861 | overlap 939390 939400 CAGGAACTACAAAAA GTGCAGGGAAAA ATATCA TTTTCGCTGCAG AAAAGAACAATCGCT TERM 1139 939716 - 939688 - g 75 -8.2 -3.75766 | opp_overlap 939688, overlap 939681 CCTAGAACCCAATAA GATCTCTTTCCC CATTC GGAAAGGAGATC TTCTAGGCCATTGGA dacC 938633 - 939946 + | D-alanyl-D-alanine carboxypeptidase CTL0814 940079 - 940486 + | hypothetical protein CTL0815 940483 - 941589 + | putative methyltransferase brnQ 941739 - 942974 + | branched-chain amino acid transport system carrier protein TERM 1140 942998 - 943029 + F 75 -6.7 -4.36914 | gap 1, opp_overlap 943002, overlap 943000 GTCGCAATGTTTGAA G-CCATCCCTTACT GAATA AGTAAGGGATGTTC TTTTGTCCGGAAAGC TERM 1141 943000 - 943026 + F 100 -13.9 -4.30995 | opp_overlap 943002, overlap 942998 CGCAATGTTTGAAGC CATCCCTTACT GAATA AGTAAGGGATG TTCTTTTGTCCGGAA TERM 1142 943024 - 943002 - f 76 -10.7 -2.53213 | opp_overlap 943000 942998 CAATGTTTGAAGCCA TCCCTTACT GAATA AGTAAGGGA TGTTCTTTTGTCCGG TERM 1143 943070 - 943056 - f 73 -2.8 -5.1848 | overlap 943057 AAGCAACCCAAAAAA CGCCTT TAG AAGACA CCTATCTACTCCTAA TERM 1144 945868 - 945850 - g 73 -3.8 -5.03994 | overlap 945852 945866 GTTCACACATAAAAA TGCATCCG AAA CAGATGAA GATATTATTTCTTCT TERM 1145 946195 - 946177 - g 78 -5.3 -5.04175 | TGAATCATACAAAAA CCATTCC TCTGG GAAATGG GCTGCTTTTGTGAAA CTL0818 943148 - 946747 + | helicase CTL0819 946926 - 947405 + | hypothetical protein lpdA 947614 - 949011 + | dihydrolipoamide dehydrogenase TERM 1146 949158 - 949131 - g 95 -7.8 -4.92756 | gap 1, opp_overlap 949131 949132, overlap 949132 ACTATCAAAAATAAA GGGCTTCCT-ACA GTC TGTGAGGAAGCCT CTTGTCCGAATCGCA TERM 1147 949157 - 949132 - g 89 -11.3 -3.54027 | gap 1, opp_overlap 949131 949132, overlap 949131 CTATCAAAAATAAAG GGCTTCCT-ACA GTC TGTGAGGAAGCC TCTTGTCCGAATCGC TERM 1148 949132 - 949157 + G 84 -11.3 -3.22475 | gap 1, opp_overlap 949132 949131, overlap 949131 CTATCAAAAATAAAG GGCTTCCT-ACA GTC TGTGAGGAAGCC TCTTGTCCGAATCGC TERM 1149 949337 - 949303 - g 70 -5.9 -4.25566 | opp_overlap 949303 949303, overlap 949304 AAGAAGGAGCTAAAA TTGCT-GAGTCCGCAAA AGC TTTG-GGACTCAAGCAC ATTGTCATCACTATG TERM 1150 949336 - 949304 - g 72 -9.4 -3.14255 | opp_overlap 949303 949303, overlap 949303 AGAAGGAGCTAAAAT TGCT-GAGTCCGCAAA AGC TTTG-GGACTCAAGCA CATTGTCATCACTAT TERM 1151 949818 - 949832 + G 75 -5.7 -4.59342 | TATCGCTCGGTAGGA GAGTC GTTAG GACTC TTTATTTATGCTGGC lipA 949008 - 949943 + | lipoyl synthase TERM 1152 950501 - 950514 + G 72 -9.5 -3.08197 | opp_overlap 950500 950501 CTGAAGAAGATCAAC GGCCG CTAA CGGCC TCTGTATATATCAAA TERM 1153 950939 - 950910 - g 72 -7.9 -3.8211 | gap 1, overlap 950914 950927 TTTCACTCAGAATAA GCCAGCTCCAAAAG AAA CTCCTGGAGC-AGC AGAAGGTGCAGAAGC TERM 1154 950936 - 950914 - g 74 -10.6 -2.69073 | overlap 950910 950927 ACTCAGAATAAGCCA GCTCCAAAAG AAA CTCCTGGAGC AGCAGAAGGTGCAGA sctJ 950047 - 951024 + | type III secretion system protein, membrane component CTL0823 951025 - 951861 + | hypothetical protein sctL 952137 - 952808 + | type III secretion system protein sctR 952821 - 953741 + | type III secretion system protein sctS 953753 - 954037 + | type III secretion system, membrane protein sctT 954044 - 954913 + | type III secretion system, membrane protein TERM 1155 954952 - 954926 - T 100 -13.1 -6.30182 | opp_overlap 954929 TGATACAAAAAAAAA GAACTCCCTCC AAAAA AGAGGGAGTTC TTCACACCACGTAAG TERM 1156 954929 - 954949 + T 73 -8.3 -3.61517 | opp_overlap 954926 TACAAAAAAAAAGAA CTCCCTC CAAAAAA GAGGGAG TTCTTCACACCACGT CTL0828 955435 - 954992 - | hypothetical protein TERM 1157 955346 - 955360 + g 80 -2.8 -5.45802 | overlap 955343 GACCTTTGGATTTGT GTGC AAATCAC GCAC TTTTTGTTTTAGAGA CTL0829 956517 - 955525 - | hypothetical protein TERM 1158 955887 - 955900 + g 71 -2.4 -5.1244 | ACAATAAATTCAACC TACC CTGATT GGTA TTTTTCTCTTCATAG CTL0830 957047 - 956523 - | hypothetical protein CTL0831 957487 - 957032 - | hypothetical protein gspG 957800 - 957471 - | general secretion pathway protein G gspF 959037 - 957862 - | general secretion pathway protein F gspE 960554 - 959049 - | general secretion pathway protein E TERM 1159 960411 - 960421 + g 82 -3.2 -5.44119 | CACCTCATCCAAAGC CTCT AAA GGAG TTTTTTTCAAATGCC gspD 962820 - 960538 - | general secretion pathway protein D TERM 1160 960857 - 960835 - G 91 -8.4 -4.58283 | opp_overlap 960835 CAACTCTCCTAAAAA TGGAATCCCG TCA CGAGAATCCA TAGTTTGATTACAAC CTL0836 964050 - 962821 - | hypothetical protein TERM 1161 963018 - 963042 + g 73 -10.1 -3.06384 | overlap 963015 963021 963023 CTAAAAGAGGGCTCC GAAGCTTACCT GAT AGGTAATCTTC TAATTGTCTTTTTGA TERM 1162 964173 - 964125 - R 88 -6.5 -5.18371 | opp_overlap 964133, overlap 964128 964133 TTTTACAAAAGAAAA TAAGAAAAGCCG-TTTTTTTGTT AAAAA AACAAAAAAATCGGCTTTTA-TA TGAAATTAAATGATA TERM 1163 964171 - 964128 - R 89 -10.7 -4.66746 | gap 1, opp_overlap 964133, overlap 964125 964133 TACAAAAGAAAATAA GAAAAGCCG-TTTTTTTGTT AAAAA AACAAAAAAATCGGCTTTTA TATGAAATTAAATGA TERM 1164 964166 - 964133 - R 93 -10.6 -5.14949 | gap 1, opp_overlap 964133, overlap 964128 964125 AAGAAAATAAGAAAA GCCG-TTTTTTTGTT AAAAA AACAAAAAAATCGGC TTTTATATGAAATTA TERM 1165 964133 - 964166 + r 89 -10.6 -4.55118 | gap 1, opp_overlap 964128 964125 964133 AAGAAAATAAGAAAA GCCG-TTTTTTTGTT AAAAA AACAAAAAAATCGGC TTTTATATGAAATTA pepP 965249 - 964179 - | proline dipeptidase TERM 1166 964909 - 964881 - G 76 -9.7 -3.26449 | overlap 964876 TTTCACACAACGTAA CTTCTCCGCAA CTAAACT TTGCGGAGAAA ATGCATACCCGCTGT mutL 966990 - 965260 - | DNA mismatch repair protein TERM 1167 967102 - 967092 - H 74 -5.4 -4.75174 | GAGGTAACGGAAAAA TTGC AAG GCAA CGACACACGCTGCTG TERM 1168 967417 - 967393 - g 82 -5.7 -5.07486 | overlap 967395 GATTTGGAACAAAAA TATCCTGTTCC TAC GGAAGAGGAGA CAAAACAAGTTCTCA TERM 1169 967415 - 967395 - g 79 -8.3 -4.16307 | overlap 967393 TTTGGAACAAAAATA TCCTGTTCC TAC GGAAGAGGA GACAAAACAAGTTCT scc2 967270 - 967968 + | type III secretion chaperone (low calcium response protein H) CTL0840 967985 - 968344 + | hypothetical protein TERM 1170 969500 - 969490 - g 73 -5.4 -4.66609 | CAGCGCAGGGAAAAA TGCT GTT AGCA AATCGTTCCCTAAAC copB 968381 - 969844 + | putative type III secretion system membrane protein TERM 1171 969841 - 969851 + F 70 -2.6 -5.14965 | CTTAGCCGCCGCAGC TTAA CTA TTAA TTTTTTGATGGAGAT copD 969875 - 971194 + | putative type III secretion system protein TERM 1172 971237 - 971264 + T 91 -7 -5.35815 | gap 1, opp_overlap 971237 AACTCAGCTTCAGAA CCGTAGGCATCCT AAA AGGGC-CCTACGG TTTTTCTTTACTCTG CTL0843 972255 - 971272 - | putative integral membrane protein TERM 1173 972271 - 972259 - H 70 -9.1 -3.21416 | opp_overlap 972269 GACCGCCACCATGAA CCGTG TCG CACGG ATCTACGATCCGTTC TERM 1174 972269 - 972283 + H 79 -10 -3.48276 | opp_overlap 972259 ATGAACCGTGTCGCA CGGATC TAC GATCCG TTCTATAGAACAACC TERM 1175 972518 - 972538 + H 85 -2.5 -5.72622 | overlap 972535 AAAAAGAGACGATTC TTTGCAGCG GTT TGCAGTAAA TTTTTTATTTATGGA TERM 1176 973277 - 973265 - g 86 -3.3 -5.71638 | opp_overlap 973265 GAAGAAGCAAAAAAA CGCGA CCA TCGAG TTCTTGGAACAAAGT TERM 1177 974068 - 974079 + G 73 -5.8 -4.48902 | AAGTACACCTATTAT GCTC CATA GAGC TTTGTTTGGATCTAT thrS 972560 - 974467 + | threonyl-tRNA synthetase TERM 1178 974473 - 974505 + F 100 -12.1 -4.43397 | opp_overlap 974471 974470, overlap 974470 974474 TTCCTTATAGAAGGC CGGGCTTGCATAG ATTCTGC CTATGCAAGCCCA TTATTTCTTTTCACA TERM 1179 974474 - 974504 + F 100 -15.6 -3.24954 | opp_overlap 974471 974470, overlap 974473 974470 TCCTTATAGAAGGCC GGGCTTGCATAG ATTCTGC CTATGCAAGCCC ATTATTTCTTTTCAC TERM 1180 974892 - 974873 - f 81 -6.4 -4.95957 | gap 1, overlap 974874 TAAAGCAACTAAAAA GGAGCGAGG CTT CCTC-CCCC TACAAGGGCTTCACC minD 974919 - 975686 + | ParA family chromosome partitioning ATPase TERM 1181 975778 - 975791 + GF 76 -6.7 -4.43501 | opp_overlap 975778, overlap 975775 AAAAAGCGTTTAGAA GGAGA GCTT TCTCC TTTTCTAAATGGGTT TERM 1182 976419 - 976408 - gf 71 -3 -4.98758 | opp_overlap 976408 AAAAAGTTACAAAAA GTTA CAAC TAAC CTTCTTTCTAACACT gp6D 975691 - 976482 + | virulence plasmid protein pGP6-D-related protein CTL0847 976448 - 976999 + | hypothetical protein TERM 1183 977450 - 977472 + G 95 -7.9 -5.12617 | GCAATCGGCTATCCC TGAGATTTA TGAAT TAAATCTCA TTTTTTCCATGCTTA trpS 977178 - 978218 + | tryptophanyl-tRNA synthetase TERM 1184 978655 - 978639 - g 72 -9.5 -3.13403 | overlap 978637 CGCCTTTCAGCAACA CGTTCTA TCT TAGAACG CCGAGATACTCTTAT TERM 1185 980232 - 980208 - g 84 -3.5 -5.54894 | overlap 980210 980211 AATGCAGCAAAAAAA CAGCTCCTCTT TCA AAAAGGAGAAG AAGAAAATGGGGACT uvrB 978243 - 980249 + | excinuclease ABC subunit B eno 980411 - 981685 + | phosphopyruvate hydratase rbsU 981813 - 983765 + | sigma regulatory family protein-PP2C phosphatase TERM 1186 984234 - 984248 + G 71 -4.2 -4.82756 | opp_overlap 984234, overlap 984226 TAGCATCCGTACAAA GAATCC TCG GGATCC TTTTGTTCGTTATAT CTL0852 983890 - 985698 + | hypothetical protein CTL0853 988577 - 985713 - | hypothetical protein TERM 1187 987954 - 987934 - G 74 -6.2 -4.43208 | opp_overlap 987934 ATAGGCTTAAATAAA TCTCCTAC ACACG GTAGAAGA TTGATCGGAACGGAA TERM 1188 988428 - 988443 + g 95 -3.2 -6.15828 | overlap 988429 ATAACTGGCTAACTT CCTTGC AATA GCAAGA TTTTTTTTTGCTAAA TERM 1189 988429 - 988442 + g 74 -6.7 -4.2787 | overlap 988428 TAACTGGCTAACTTC CTTGC AATA GCAAG ATTTTTTTTTGCTAA TERM 1190 988632 - 988622 - R 74 -5.4 -4.69053 | opp_overlap 988622 TACCATGGAATAAAA TTGC GAT GCAA TCTTCGAAACTTAAG sdhB 989372 - 988674 - | succinate dehydrogenase iron-sulfur subunit sdhA 991331 - 989451 - | succinate dehydrogenase flavoprotein subunit TERM 1191 992132 - 992116 - R 74 -8.7 -3.41025 | overlap 992114 992112 AATAAAGTAAACACA CATCCCG ATA CGGAATG AATACATCGTATAAT CTL0858 993127 - 992336 - | putative hydrolase dsdD 995290 - 993212 - | thiol:disulfide interchange protein TERM 1192 993541 - 993531 - G 71 -4 -4.82901 | TTTTCGGGAGAAAAA GATT GCC AATC AAAGCTATGTGCAGG TERM 1193 994939 - 994914 - G 81 -12 -2.53263 | overlap 994936 994937 TTTATCTCCAATGGA CGCGTTTCTA TCTCTT TAGAAACGCG AATATCCGCAACCAC TERM 1194 995328 - 995341 + H 79 -2.4 -5.61881 | opp_overlap 995328 TAGCAAATCATCAAA CAAC AGAAGA GTTG TTTTTGTTTTTGCAA exbB 995443 - 996141 + | macromolecule transporter CTL0861 996138 - 996545 + | macromolecule transport protein TERM 1195 996909 - 996893 - g 78 -5.2 -5.03314 | overlap 996897 GCTACTCTCAAAAAA TTAGCT CAACT AGCTAA TCAGCTGGCCGAAGA CTL0861A 996548 - 997255 + | histone H1-I TERM 1196 997938 - 997922 - g 91 -6.5 -5.47218 | overlap 997923 CTGCAGGGAAAAAAA TCCTTGC TAT GCAAGGG AATCAGTTTATGCCG TERM 1197 997937 - 997923 - g 84 -10 -3.87608 | overlap 997922 TGCAGGGAAAAAAAT CCTTGC TAT GCAAGG GAATCAGTTTATGCC TERM 1198 998114 - 998131 + G 76 -2.7 -5.38054 | gap 1 ACCCTTCCTTTAGCC CTG-ACGG CAC CCGTTTAG TTTTTGTTTCTAACA TERM 1199 998381 - 998369 - g 77 -6.2 -4.68511 | CTGAACATAAAGAAA GCCC TTCTT GGGC TGCGGATAGTAACCA tolB 997255 - 998550 + | translocation protein TolB TERM 1200 998726 - 998707 - g 79 -8 -4.2461 | opp_overlap 998707 998706 ACTCCGATGAAGAAA TTCAACAA GCTT TTGTTGAA GATTTTGATTCCAAA pal 998547 - 999113 + | peptidoglycan-associated lipoprotein TERM 1201 999159 - 999177 + G 71 -8.8 -3.36341 | overlap 999157 AAGTTCGTCTGTTTA CGGCGC AGGTAAA GCGCCG TCTTTGCAGGCTATT CTL0864 999103 - 999705 + | putative soluble transglycosylase TERM 1202 999904 - 999918 + G 74 -10 -3.21593 | overlap 999902 GCCCTCAGGTATTTC GCTTGC TGT GCAAGC TATTATGCAGGGATA CTL0865 999776 - 1000168 + | hypothetical protein ahpC 1000752 - 1000165 - | thioredoxin peroxidase groEL2 1002561 - 1000960 - | 60 kDa chaperonin GroEL2 TERM 1203 1002516 - 1002498 - G 71 -9.6 -3.02677 | AAAACATATGAGATA TTACACGC GCG GCGCGTAA GACTGCCTGTAAACC CTL0868 1003867 - 1002641 - | hypothetical protein TERM 1204 1003751 - 1003765 + g 75 -2.2 -5.29445 | AACCCGCTTGCCACG TATTTT CTC AAGATA TTTTTCTTCTTGAAA TERM 1205 1004498 - 1004520 + G 70 -9.2 -2.83299 | overlap 1004494 1004493 1004497 GAAGGAACTATTGCG TTTGAGGAAC GCG GTTCCTCAGG GTTTGGATATGATCC TERM 1206 1004525 - 1004535 + G 70 -5.4 -4.55295 | GGTTCCTCAGGGTTT GGAT ATG ATCC TTTGTTTGTAAAACA CTL0869 1004063 - 1004692 + | putative deoxyribonucleotide triphosphate pyrophosphatase CTL0870 1004905 - 1004666 - | hypothetical protein ung 1005579 - 1004890 - | uracil-DNA glycosylase TERM 1207 1006074 - 1006058 - g 80 -6.5 -4.8543 | opp_overlap 1006057 1006061 GAACCTCGATAAAAA GCTTTGC AAT GCAATGC AATTTACTATCTCTC TERM 1208 1006907 - 1006887 - g 71 -3.3 -5.03715 | ATTAGCCTGAAAAAA TGCGGTA TTGGAGC TACCACA TTAGCCGCTCTTATG uvrD 1005660 - 1007564 + | DNA helicase TERM 1209 1007721 - 1007737 + G 81 -5.2 -5.18355 | GATCTCGATAGCTTA GATTCT CCTCC AGAATC TTTTTCGTTTTTCCC rpoN 1007568 - 1008878 + | RNA polymerase factor sigma-54 TERM 1210 1008963 - 1008936 - T 100 -14.3 -5.34381 | opp_overlap 1008959 AAATGGAAATAAAAA GCCCAGAACAA GAGAAG TTGTTCTGGGC TGACAGAAGCTGTCA TERM 1211 1008959 - 1008983 + T 85 -9.3 -4.28361 | opp_overlap 1008936 CAAGAGAAGTTGTTC TGGGCTGACAG AAG CTGTCAGATCA TTTTAATAAGATTGA CTL0874 1009681 - 1008986 - | hypothetical protein TERM 1212 1009092 - 1009123 + g 75 -3.1 -5.24796 | gap 2 TCTAACACTTTATCA GCGTCATCTTTGAGA AGCA TCTCAATGA-G-CGC TTTTTCTTCTCTAGC CTL0875 1010409 - 1009678 - | hypothetical protein TERM 1213 1009816 - 1009829 + gr 75 -8.1 -3.84514 | overlap 1009820 AGGTGCCTGCTCTAT CACCG CTAA CGGTG TTTGCTCATTCCCCT TERM 1214 1010153 - 1010172 + gr 82 -5 -5.28481 | opp_overlap 1010145 TCATCAATCCCTGCA GAAGGAAT CAAA ATACCTTC TTTTTTCGTTAGATA TERM 1215 1010321 - 1010351 + gr 78 -10.6 -3.06815 | gap 1, opp_overlap 1010315 1010310 ACTACCACACTCCGT TCTTGC-AGAGGC GGCAAA GCCTCTTGCAAGA TCTCTTGAAGCGAAT folA 1010860 - 1010381 - | dihydrofolate reductase TERM 1216 1010723 - 1010744 + gr 78 -9.5 -3.65754 | AGACTCCCAAGTCTT TCGTCCCAT AATG ATGGGATGA TTTCGAATGGTTTCT folP 1012209 - 1010857 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase TERM 1217 1011832 - 1011818 - G 70 -2.8 -5.06472 | overlap 1011806 ATAGAAAGAATAAAA GGTCTT TCT AATACC TTAGGATGTGGGATT folX 1012580 - 1012206 - | dihydroneopterin aldolase rpoD 1014314 - 1012599 - | RNA polymerase sigma factor TERM 1218 1012845 - 1012817 - G 100 -11.1 -4.45945 | opp_overlap 1012822 1012840, overlap 1012822 ACCGATGAATCAAAA CAAAACGCTCACG GTC CGTAAGCGTTTTC AAAACTTCTTTCATT TERM 1219 1012822 - 1012840 + g 83 -8.8 -4.12599 | opp_overlap 1012817 1012822 TGAATCAAAACAAAA CGCTCACG GTC CGTAAGCG TTTTCAAAACTTCTT TERM 1220 1012840 - 1012822 - G 100 -11 -5.18643 | opp_overlap 1012822, overlap 1012817 TGAATCAAAACAAAA CGCTCACG GTC CGTAAGCG TTTTCAAAACTTCTT CTL0880 1015752 - 1014463 - | putative integral membrane protein TERM 1221 1015138 - 1015157 + g 74 -6.4 -4.44448 | overlap 1015114 1015140 ATATTCATCATGCAG CTCTTGCT GATA AGCAAGCG TTTCTTTGAGCTCCT TERM 1222 1015647 - 1015658 + g 86 -3 -5.63517 | opp_overlap 1015647 GAAAGTATCGCGAAA TACA ATAA TGTA TTTTTTGTTTGGCAG TERM 1223 1016138 - 1016120 - H 72 -9.6 -2.74263 | opp_overlap 1016114 1016135, overlap 1016119 ATGTCATGCCGAAAG TCACAGCA GAT CGCTGTGA GGTGTCGCGTTTGTT TERM 1224 1016264 - 1016243 - g 73 -5.1 -4.62069 | opp_overlap 1016243, overlap 1016245 GTCGGACCTCAAAAA CGCCCTTCT GCAG AGAAGAGAG TTATCACTTCTAAGA rpsT 1016201 - 1016497 + | 30S ribosomal protein S20 TERM 1225 1017180 - 1017207 + G 86 -11.4 -3.27565 | CAAACTTTCCCTGTT TACCAGTTGGGT GCAC ACGCAACTGGTA TTGGCTTATCTGCTT CTL0882 1016730 - 1017530 + | hypothetical protein TERM 1226 1017556 - 1017579 + T 100 -13.2 -5.95166 | CACCACATCCTTGAA GCTCGCAGGT ACAT ATCTGCGAGC TTTTTTTTAATTAGA CTL0883 1020213 - 1017586 - | hypothetical protein TERM 1227 1019455 - 1019441 - G 75 -8.6 -3.90744 | TCTTTCGTCAAAGAA TCTGGA ACA TCCAGA CCTAAATTCAAACAC TERM 1228 1020225 - 1020244 + H 71 -3.7 -5.00196 | opp_overlap 1020225 ACATAAAAACAAAAC TAAAAAC TTTTAT GTTTTTA TTTTCTTATTTAAAA CTL0884 1020329 - 1022845 + | hypothetical protein TERM 1229 1022884 - 1022855 - T 100 -12.4 -4.63044 | opp_overlap 1022855 AGTTAGACAAATAAA GCAGCTTAAAAA TTTTTG TTTTTAAGCTGC TTTCCCTCACGATTA TERM 1230 1022855 - 1022884 + T 100 -13.1 -3.65827 | opp_overlap 1022855 AGTTAGACAAATAAA GCAGCTTAAAAAT TTTT GTTTTTAAGCTGC TTTCCCTCACGATTA CTL0885 1025407 - 1022909 - | hypothetical protein TERM 1231 1025605 - 1025577 - R 100 -17.7 -5.79595 | opp_overlap 1025573 TTTGAAAAGAAAAAA GAGCCAAAAAAGA AAT TCTTTTTTGGCTC CCCCTCAATTCACAA CTL0886 1027590 - 1025635 - | hypothetical protein TERM 1232 1027672 - 1027645 - R 100 -14.2 -5.83226 | opp_overlap 1027645 AAGGCAATAAAAAAA GCCCACACCC GTTATTTT GGGTGTGGGC TCTTAAAAGACTATC TERM 1233 1027645 - 1027672 + r 100 -14.9 -3.02829 | opp_overlap 1027645 AAGGCAATAAAAAAA GCCCACACCCG TTATTT TGGGTGTGGGC TCTTAAAAGACTATC CTL0887 1028999 - 1027698 - | hypothetical protein TERM 1234 1029260 - 1029218 - R 89 -7.8 -5.06414 | opp_overlap 1029232, overlap 1029220 TTCTTGGAAGAAAAA GATGTCCTAAGAGACTAGCT TAC AGCTAGTTTCTTAGGATAGA CTGATGCCCTTTCCA TERM 1235 1029258 - 1029220 - R 100 -14.8 -4.16307 | opp_overlap 1029232, overlap 1029218 CTTGGAAGAAAAAGA TGTCCTAAGAGACTAGCT TAC AGCTAGTTTCTTAGGATA GACTGATGCCCTTTC TERM 1236 1029232 - 1029246 + r 79 -8.6 -4.1822 | opp_overlap 1029220 1029218 AGATGTCCTAAGAGA CTAGCT TAC AGCTAG TTTCTTAGGATAGAC mviN 1030826 - 1029243 - | putative virulence protein nfo 1031026 - 1031892 + | endonuclease IV TERM 1237 1031954 - 1031937 - T 100 -12.7 -5.86061 | CTTTATGAAAAAAAA GCCTCGC AAAA GCGAGGC TTCAAAGAACATATA rpsD 1032617 - 1031988 - | 30S ribosomal protein S4 TERM 1238 1032845 - 1032856 + H 76 -3 -5.48514 | GTTTAGAAAGATACT GAAA AAGG TTTC TTTTTATTTCTTCAT TERM 1239 1032947 - 1032959 + H 80 -7.7 -4.43012 | TTTTAAACAAACTTT TCGAG CTT CTCGA TTTTAATCTTAAGAT TERM 1240 1033343 - 1033322 - g 78 -5.9 -4.84311 | GTCGATACAACAAAA CAAGGAAAA CACA TTTCCCCTG AAGAGTGGCATGAAA CTL0891 1033001 - 1033984 + | hypothetical protein TERM 1241 1034017 - 1033991 - T 100 -10.1 -5.9873 | opp_overlap 1033993 1033996 CCAGCATAAAAAAAA GAGACGCCCAC GTTCT GTGGGCTCCTC TTCCAAAGTCTTCTG TERM 1242 1033996 - 1034012 + T 74 -10.1 -2.74192 | opp_overlap 1033991, overlap 1033993 ATAAAAAAAAGAGAC GCCCACG TTC TGTGGGC TCCTCTTCCAAAGTC ispA 1034932 - 1034057 - | dimethylallyltransferase TERM 1243 1034961 - 1034983 + r 100 -13.6 -4.258 | opp_overlap 1034964 CCTTCTTTTTCTCAT CAACCTTTGT TTG ACAAAGGTTG TTTCTTAGTAAATGG TERM 1244 1034980 - 1034964 - R 74 -9.5 -3.14132 | opp_overlap 1034961 TCTTTTTCTCATCAA CCTTTGT TTG ACAAAGG TTGTTTCTTAGTAAA glmU 1035605 - 1034988 - | glucosamine-1-phosphate acetyltransferase CTL0894 1036341 - 1035658 - | transcriptional regulatory protein CTL0895 1036521 - 1036775 + | hypothetical protein CTL0897 1038545 - 1036956 - | hypothetical protein