TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.582829 %AT, 924835 nt, 7731 terms. Intergenic: 0.619793 %AT, H2T: 110970 nt, 789 terms; T2T: 27970 nt, 362 terms; H2H: 45661 nt, 682 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|76788711|ref|NC_007429.1| Chlamydia trachomatis A/HAR-13, complete genome (length 1044459) CTA_0001 1 - 1770 + | hypothetical protein TERM 1 1841 - 1803 - T 91 -9.6 -5.14563 | opp_overlap 1804 1807 1826 1834, overlap 1807 GTTTGTAGCAAAAAA CTAAGCCCACCAAGAAGA AAT TCTCTTTGGTGGGCTTCT TTTTTTATTCAAAAA TERM 2 1804 - 1840 + T 100 -13.1 -5.7946 | opp_overlap 1803 1807, overlap 1807 1826 1834 TTTGTAGCAAAAAAC TAAGCCCACCAAGAAGA AAT TCTCTTTGGTGGGCTTC TTTTTTTATTCAAAA TERM 3 1807 - 1837 + T 100 -14.8 -4.96435 | opp_overlap 1803 1807, overlap 1804 1826 1834 GTAGCAAAAAACTAA GCCCACCAAGAAGA AAT TCTCTTTGGTGGGC TTCTTTTTTTATTCA TERM 4 1837 - 1807 - T 100 -14.8 -3.96447 | opp_overlap 1807 1804 1826 1834, overlap 1803 GTAGCAAAAAACTAA GCCCACCAAGAAGA AAT TCTCTTTGGTGGGC TTCTTTTTTTATTCA TERM 5 1834 - 1865 + T 76 -9.7 -3.07233 | gap 1, opp_overlap 1807 1803, overlap 1807 1804 1826 GAAATTCTCTTTGGT GGGC-TTCTTTTTT TATTC AAAAAAGAAAGCCC TCTTCAAGATTATAC CTA_0002 2187 - 1915 - | hypothetical protein gatC 2388 - 2690 + | aspartyl/glutamyl-tRNA amidotransferase subunit C gatA 2702 - 4177 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 6 5397 - 5419 + G 73 -8.5 -3.69216 | overlap 5396 GATAGAATGGTCTCT TCTTTTGGG GAAAG CCCAGAAGA TATTTTGCGTAGACA gatB 4179 - 5645 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 7 5715 - 5675 - T 88 -9.2 -4.58242 | gap 1, opp_overlap 5678 5680, overlap 5680 5683 AAAAAAGGCATAAAA GAGAAGAACCCTCTTCATA AAAC TATGGAGAGGGTTCT-CTT TTTAAAAGGCTTTAT TERM 8 5678 - 5713 + T 100 -14.2 -4.58685 | opp_overlap 5675 5680 5683, overlap 5680 AAAGGCATAAAAGAG AAGAACCCTCTTCATA AAAC TATGGAGAGGGTTCTC TTTTTAAAAGGCTTT TERM 9 5680 - 5711 + T 100 -16.8 -3.90316 | opp_overlap 5680 5675 5683, overlap 5678 AGGCATAAAAGAGAA GAACCCTCTTCATA AAAC TATGGAGAGGGTTC TCTTTTTAAAAGGCT TERM 10 5711 - 5680 - T 100 -14.6 -4.03183 | opp_overlap 5678 5680, overlap 5675 5683 AGGCATAAAAGAGAA GAACCCTCTTCATA AAAC TATGGAGAGGGTTC TCTTTTTAAAAGGCT TERM 11 5708 - 5683 - T 85 -10.5 -4.12066 | opp_overlap 5680 5678, overlap 5680 5675 CATAAAAGAGAAGAA CCCTCTTCATA AAAC TATGGAGAGGG TTCTCTTTTTAAAAG CTA_0006 6835 - 5744 - | hypothetical protein TERM 12 5800 - 5778 - G 89 -12 -3.25823 | opp_overlap 5780 5793, overlap 5790 TTCTTTTGAGATGAA TCGGATGAGG AAT CCTCTTCCGA AGATTCGCTGCTGTC TERM 13 5881 - 5895 + g 74 -7.8 -4.07568 | TGCGAGAGAGCTTTA CGACGC GGC GTGTCG TTTTCGGAGAAGAAG CTA_0007 7532 - 6963 - | hypothetical protein CTA_0008 7846 - 8796 + | hypothetical protein rnhC 9714 - 8812 - | ribonuclease HIII yfgA 9968 - 10399 + | sigma-54 interaction/ATP-binding protein htrB 11753 - 10386 - | lipid A biosynthesis lauroyl acyltransferase CTA_0012 13140 - 11884 - | hypothetical protein ybbP 13932 - 13318 - | hypothetical protein TERM 14 13833 - 13813 - G 73 -7.5 -4.13421 | AAGAAAAGACAACAA GCCAAAGAC GAG GTCCATGGC GCCTGTTCCCCAGAA TERM 15 14006 - 13984 - H 85 -9.2 -4.26076 | TTATTTTCAGCAAAA CAAGAAGCTG TAC CAACTCCTTG AAACTTATTACGGAT TERM 16 14610 - 14625 + G 82 -6.8 -4.8384 | GTATGGTTGCGCTCG GCGCTC ACAT GAGTGC TTTTTGGATTGTTTG TERM 17 15122 - 15108 - g 71 -4.2 -4.81851 | overlap 15109 ACCGAAATGCAAAAA CTCCTG TTA CAGGAC TGGATCAGTTCCCTA TERM 18 15266 - 15251 - g 82 -3.3 -5.55769 | GTGTATAAGAAAAAA TCTTG GAGCTG CAAGA AGGGGATCTTATGGA TERM 19 15353 - 15365 + G 74 -7.7 -4.02253 | ACAGAGGTAGGGCGT CAACC TTG GGTTG TTTATGGCTTATTAA cydA 14207 - 15547 + | cytochrome d ubiquinol oxidase subunit I TERM 20 15778 - 15808 + G 84 -9.8 -3.85184 | overlap 15770 15798 TTTGCTGGATTGTTT GCAGGGTTCC CGACCGCTTAT GGAACCCTGC TTTCCATCTTTTACA cydB 15559 - 16620 + | cytochrome d ubiquinol oxidase subunit II TERM 21 16630 - 16661 + T 100 -14.6 -3.28712 | opp_overlap 16637, overlap 16637 TACTAATTGCAGTAG GGTACAAGGCTCTT GAAA AGGAGCCTTGTATC TTGTGCAAACAAAAG TERM 22 16637 - 16654 + T 72 -7.7 -3.72788 | opp_overlap 16637, overlap 16630 TGCAGTAGGGTACAA GGCTCTT GAAA AGGAGCC TTGTATCTTGTGCAA TERM 23 16746 - 16726 - T 79 -8.3 -4.06633 | opp_overlap 16728 GAGAAAGTTAAAGAA TAGTTGCAG CAG CTGCAGCTA GTTCGGAACGTTCCG phoH 18022 - 16718 - | hypothetical protein CTA_0017 18231 - 18959 + | hypothetical protein CTA_0018 19145 - 20446 + | hypothetical protein TERM 24 20454 - 20493 + T 100 -10.2 -6.04324 | opp_overlap 20459 20462, overlap 20457 20460 GGGCATAAGCAAGTT CAATAGGAGTCTTGTTAC TTAG GTAACAAGACTCTTCTTC TTTTTTCTTTTTTGC TERM 25 20457 - 20490 + T 100 -11.9 -4.97159 | opp_overlap 20459 20462, overlap 20454 20460 CATAAGCAAGTTCAA TAGGAGTCTTGTTAC TTAG GTAACAAGACTCTTC TTCTTTTTTCTTTTT TERM 26 20488 - 20459 - T 87 -12.3 -3.11178 | opp_overlap 20457 20454 20460, overlap 20462 TAAGCAAGTTCAATA GGAGTCTTGTTAC TTAG GTAACAAGACTCT TCTTCTTTTTTCTTT TERM 27 20460 - 20487 + T 100 -15.8 -4.4634 | opp_overlap 20459 20462, overlap 20457 20454 AAGCAAGTTCAATAG GAGTCTTGTTAC TTAG GTAACAAGACTC TTCTTCTTTTTTCTT TERM 28 20485 - 20462 - T 90 -12.6 -2.76046 | opp_overlap 20460 20457 20454, overlap 20459 GCAAGTTCAATAGGA GTCTTGTTAC TTAG GTAACAAGAC TCTTCTTCTTTTTTC CTA_0019 20981 - 20508 - | hypothetical protein TERM 29 21484 - 21494 + H 71 -8.2 -3.40597 | opp_overlap 21483 GGAGCTTGCGAACAC CGGG TCA CCCG TATTTAGGTAACAAC TERM 30 21961 - 21949 - H 72 -7.7 -3.72893 | overlap 21958 TACCTGTTTAGGAAA GCAGT TAA ACTGC AAACTTTGTAAGCAG TERM 31 22126 - 22139 + G 89 -3.7 -5.69262 | opp_overlap 22126 ACTTTAGACAATCGA GAGGG CTGC CCCAC TTTTTCTTTTTATGA TERM 32 23307 - 23288 - g 72 -9.4 -3.11302 | overlap 23287 GTAAGATGTTAAAAG CCAATGAA TCCA TTCATTGG ACTCCTGGGCATATC TERM 33 24740 - 24766 + G 76 -6.6 -4.46112 | TGCACAAAGGGCAGA TGGTTGTTTCTC TAG GAGAAGAGACCA TTTCTTTAGATAAAG TERM 34 24827 - 24839 + G 79 -7.7 -4.3898 | overlap 24823 AAGGATTTGTAGCGA GAAGC TCA GCTTC TTTTGTAGCAGTACT ileS 22027 - 25137 + | isoleucyl-tRNA synthetase TERM 35 25162 - 25182 + T 100 -9.8 -6.63964 | opp_overlap 25162 CATTGAGCAAAAAAA GAGGTCTT ATTAA AAGACCTC TTTTTTTTTTTGCTC TERM 36 25182 - 25162 - T 100 -9.8 -5.53991 | opp_overlap 25162 CATTGAGCAAAAAAA GAGGTCTT ATTAA AAGACCTC TTTTTTTTTTTGCTC lepB 27084 - 25198 - | signal peptidase I TERM 37 25266 - 25256 - G 79 -6.8 -4.68384 | ATGCAGTCAAGAAAA GCTC CTA GAGC CAATCCATTTACGAG TERM 38 26855 - 26867 + g 76 -2.7 -5.38951 | GTAGCTCGGAGTTTG GATTT AGG GAATC TTTTTTGTATGGCTT TERM 39 26915 - 26901 - G 100 -10 -4.72272 | opp_overlap 26899 26901 CTTGCTTAGCAAAAA GGGAAG CAT CTTCCC TATTCTGATCCAAAA TERM 40 26901 - 26915 + g 76 -10 -3.27475 | opp_overlap 26901, overlap 26899 CTTGCTTAGCAAAAA GGGAAG CAT CTTCCC TATTCTGATCCAAAA CTA_0023 28013 - 27270 - | hypothetical protein TERM 41 27975 - 27965 - G 86 -2.6 -5.80364 | ATGCCAAGAAAAAAA TAAA AAC TTTA AGAAGGTTTTGAGGG TERM 42 28114 - 28100 - g 100 -5 -6.02546 | overlap 28102 TCAAATGAAAAAAAA CACTCA TCC TGAGTA CAGACAAGTTCTGTT TERM 43 28112 - 28102 - g 73 -5.4 -4.63519 | overlap 28100 AAATGAAAAAAAACA CTCA TCC TGAG TACAGACAAGTTCTG TERM 44 28381 - 28354 - g 70 -7.8 -3.60792 | gap 1 CTCCTAAGCCTGAAA CCGTTGTGGAAGA TGT TCTTCC-CAAGGG TAAGAGGAAATCTCC rpmE2 28089 - 28415 + | 50S ribosomal protein L31 type B TERM 45 28465 - 28448 - f 89 -10.5 -4.55287 | opp_overlap 28448 GTTATCTAGAGAAAA GCGGGGC GAAC ACCCCGC TTTTTTTGTTTTAAT TERM 46 28448 - 28465 + F 100 -9.8 -6.11229 | opp_overlap 28448 GTTATCTAGAGAAAA GCGGGG CGAACA CCCCGC TTTTTTTGTTTTAAT prfA 28603 - 29682 + | peptide chain release factor 1 CTA_0026 29666 - 30538 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase ffh 30535 - 31881 + | signal recognition particle, subunit FFH/SRP54 TERM 47 32181 - 32167 - g 86 -5.7 -5.36441 | TCGTTAGACAAAAAA GACGA GCTTA TCGTC AGCGTCTTGCTGCAA rpsP 31872 - 32222 + | 30S ribosomal protein S16 TERM 48 32429 - 32443 + G 73 -10 -3.02511 | GCTTTTGATGGCAGA GCCTGT GGT ACAGGC TATTAGAAGCATAAG trmD 32238 - 33296 + | fused tRNA (guanine-N(1)-)-methyltransferase/uncharacterized domain-containing protein rplS 33322 - 33687 + | 50S ribosomal protein L19 TERM 49 33861 - 33877 + G 76 -9.4 -3.44284 | opp_overlap 33851, overlap 33859 GACGAGGCTGGGAGA GGGCCT CTTGC AGGCCC TGTTGTTGCTGGAGC TERM 50 34068 - 34093 + G 80 -10.5 -3.53444 | opp_overlap 34067 34070, overlap 34053 34071 TTGGAGGCTACCAAG GAGGCTATGGT TCAA GCCATAGCTTC TTTGCAAAGCACTCC TERM 51 34071 - 34090 + G 75 -8.6 -3.90744 | opp_overlap 34070 34067, overlap 34068 34053 GAGGCTACCAAGGAG GCTATGGT TCAA GCCATAGC TTCTTTGCAAAGCAC rnhB 33750 - 34403 + | ribonuclease HII TERM 52 34440 - 34451 + G 74 -4.4 -4.98255 | AAGACGGGGTTCAAT GCTT TCCC AAGC TTTTTATCATTAGCG gmk 34394 - 35011 + | guanylate kinase CTA_0033 35004 - 35306 + | hypothetical protein metG 35306 - 36958 + | methionyl-tRNA synthetase TERM 53 36988 - 37013 + T 100 -8.3 -6.22802 | opp_overlap 36988 CTTCACGGAGAGAAA GAGGGGTTTCA TTTA TAGAACCCCTC TTTTTTTTTGTGCAA TERM 54 37013 - 36988 - T 79 -8.3 -4.0641 | opp_overlap 36988 CTTCACGGAGAGAAA GAGGGGTTTCA TTTA TAGAACCCCTC TTTTTTTTTGTGCAA recD_1 39338 - 37098 - | exodeoxyribonuclease V alpha chain TERM 55 37677 - 37694 + g 70 -2.7 -5.00616 | opp_overlap 37675 37690 AAGGACTTGAATATC TTCGGTA AAGA TACCAAA TTTTTTAGGAACAAA TERM 56 38318 - 38336 + g 75 -2.4 -5.25772 | TTTGTGAAGAGCTAG CATGAAGA GCT TCTTTTTG TTTTTCTTCTAATTT ytfF 40611 - 39586 - | drug/metabolite exporter family protein TERM 57 40513 - 40492 - G 78 -8.7 -3.74872 | ATCTAGGTCAGCAAA GTTCCCTAG CATA CTAGGGATC ACGAAAACCATTCCC TERM 58 41410 - 41424 + G 91 -8.6 -4.7254 | TCGCTGATTTTCCTG GAGAGA GTT TCTCTC TTTTTAATGGGGGAT CTA_0037 40950 - 41723 + | biotin--protein ligase CTA_0038 42899 - 41688 - | hypothetical protein CTA_0039 43262 - 42906 - | hypothetical protein TERM 59 43019 - 43031 + g 79 -3.3 -5.32699 | opp_overlap 43020, overlap 43020 CGCCTCGGACAGTAT ACTCC CTT GGAGC TTTTTTAGTATTTGG CTA_0041 43811 - 43461 - | hypothetical protein TERM 60 43496 - 43507 + g 78 -4.4 -5.16237 | TCGTTTTTTGAGAGT TCTG GAAG CAGA TTTTTTCATAACCTT dcd 44399 - 43827 - | deoxycytidine triphosphate deaminase TERM 61 44473 - 44460 - H 90 -2.4 -5.96219 | TAGTTAGAAAAAAAA GAGA TAAAAC TCTC AACACTACAGCATGT TERM 62 44521 - 44534 + G 95 -3.1 -5.96894 | CGCAACTTTTTAATG CCTTT GTGC AGAGG TTTTTTTCTTTAAAT CTA_0043 44487 - 44639 + | hypothetical protein ruvB 44681 - 45685 + | Holliday junction DNA helicase B TERM 63 46003 - 46013 + GT 74 -6.8 -4.28713 | AACCTCTTGATGGAG CAGC CTC GCTG TTTGTTGATGGTATT CTA_0045 45639 - 46499 + | hypothetical protein TERM 64 46520 - 46565 + T 91 -13.5 -2.52464 | opp_overlap 46531, overlap 46531 TATCCCAAGAAGCTT GGTAGCAAAAAGACCCATCTC TAAT GAGCTGGGTCTTTTTTTTATC TAGATTCCAAGGAGG TERM 65 46531 - 46554 + T 100 -11 -6.02914 | opp_overlap 46531, overlap 46520 GCTTGGTAGCAAAAA GACCCATCTC TAAT GAGCTGGGTC TTTTTTTTATCTAGA TERM 66 46554 - 46531 - T 91 -11 -4.72272 | opp_overlap 46531 46520 GCTTGGTAGCAAAAA GACCCATCTC TAAT GAGCTGGGTC TTTTTTTTATCTAGA glgX 48561 - 46561 - | isoamylase TERM 67 48661 - 48629 - R 95 -12.9 -3.5525 | opp_overlap 48631 48636 48655, overlap 48631 48636 AGAGAGGGGCTTAAA CACAAAAGGAAGAGA GAC CCTCTTCCTTTTGTT GTATGATAGCAAAAC TERM 68 48659 - 48631 - R 100 -15.5 -3.35224 | opp_overlap 48631 48636 48655, overlap 48629 48636 AGAGGGGCTTAAACA CAAAAGGAAGAGA GAC CCTCTTCCTTTTG TTGTATGATAGCAAA TERM 69 48631 - 48659 + r 100 -14.8 -3.54475 | opp_overlap 48631 48629 48636, overlap 48636 48655 AGAGGGGCTTAAACA CAAAAGGAAGAG AGACC CTCTTCCTTTTG TTGTATGATAGCAAA TERM 70 48636 - 48654 + r 91 -8.9 -4.85918 | opp_overlap 48631 48629 48636, overlap 48631 GGCTTAAACACAAAA GGAAGAG AGACC CTCTTCC TTTTGTTGTATGATA TERM 71 48654 - 48636 - R 90 -9.6 -4.78848 | opp_overlap 48636 48631, overlap 48631 48629 GGCTTAAACACAAAA GGAAGAGA GAC CCTCTTCC TTTTGTTGTATGATA CTA_0047 49182 - 48679 - | hypothetical protein TERM 72 49572 - 49590 + H 74 -5.2 -4.86731 | opp_overlap 49572 49575, overlap 49575 TTCTCTGAAGATAAA GAGGTTCC GAA GGGACGTC TTTTATTTGAAAAAG ssb 49647 - 50120 + | single-strand DNA-binding protein TERM 73 50680 - 50665 - g 77 -6.2 -4.59027 | opp_overlap 50665 AATGATCACACAAAA GAACAA AAAA TTGTTC TTCTTGGTCTAGGGA TERM 74 51320 - 51346 + G 84 -3.6 -5.42265 | overlap 51313 51322 CCATGAAGGAAGACA TGGCTGGAGCGG CTA CCGTTCTAGGAA TTTTTTCTGCTTTAG pepA 50461 - 51960 + | leucyl aminopeptidase TERM 75 51991 - 52024 + F 100 -15.7 -5.4756 | ATTAAATAATGTGTG TGGTTAGTTTTTAAT AAAA ATTAAAAACTAACCA TTTTTTATTAAAGTT hctB 52097 - 52708 + | histone-like protein 2 TERM 76 52739 - 52765 + F 100 -10.3 -5.61913 | gap 1, opp_overlap 52738 TGATTTTCTAAGTAG CCGGGAATAAGA ATTC TCTT-TTCCCGG TTTTTTGTATTTATT CTA_0051 52863 - 53807 + | hypothetical protein yraL 53902 - 54615 + | tetrapyrrole (corrin/porphyrin) methylase family protein TERM 77 55548 - 55530 - g 82 -8.2 -4.33785 | AGATTTACAAAATAA TGCTCCTT CGG AAGGAACA GGTTCAGATACAGGT TERM 78 55785 - 55810 + G 82 -8.3 -4.27519 | CAAAAAGGATAACGG GACTTATTCGC TTTT GCGAAGAGGTC TTTATCTTATCACCT CTA_0053 54706 - 56178 + | hypothetical protein TERM 79 56186 - 56212 + T 100 -12.4 -4.4767 | opp_overlap 56192, overlap 56187 GTTATTAACTATTTG AGTTAAGGGAGA GAA TCTCCCTTAACA TTTTATACTGAATCG TERM 80 56187 - 56211 + T 100 -15.9 -3.2812 | opp_overlap 56192, overlap 56186 TTATTAACTATTTGA GTTAAGGGAGA GAA TCTCCCTTAAC ATTTTATACTGAATC TERM 81 56206 - 56192 - T 76 -10 -3.07291 | opp_overlap 56187 56186 AACTATTTGAGTTAA GGGAGA GAA TCTCCC TTAACATTTTATACT CTA_0054 57985 - 56237 - | hypothetical protein TERM 82 57025 - 57039 + g 83 -9.2 -3.98913 | opp_overlap 57021 TTGGGAGATCAGTGC CCTCGG CAG CCGGGG TTATTTCGGTATCAG TERM 83 57691 - 57707 + g 78 -9.5 -3.67792 | opp_overlap 57691 57694, overlap 57694 TTTGCTTGTACATCA CAATGTC GGT GACATTG TTTCCCTGCATGTCA CTA_0055 59651 - 58089 - | hypothetical protein TERM 84 58796 - 58810 + g 73 -5.7 -4.4261 | CTGCATAGTTGCTTT CTCCT TCCAC AGGAG TTTTGATATTGGCGA TERM 85 58931 - 58943 + g 74 -7.7 -3.95183 | opp_overlap 58931 58930, overlap 58930 CGTCATAAGATAAAG GAGGA GAT TCCTC TTCTTCTGTATCTGC TERM 86 59656 - 59674 + r 81 -3.2 -5.61689 | overlap 59657 TTTTTATTCATTTTT TCAATTAA AAA TTAATCGA TTTTTTATTGGTTTT TERM 87 59688 - 59701 + r 76 -2.5 -5.45802 | GATTTTTTATTGGTT TTAAT ATAG ATTAA TTTTTATTTTGAAAA hemN_1 60841 - 59705 - | coproporphyrinogen III oxidase TERM 88 60649 - 60633 - G 80 -8.7 -3.91084 | overlap 60636 GCAGGGGGAACTAAA GAAGGAG TCC CTCCTCC AAAGAATACTGTATC TERM 89 60646 - 60636 - G 71 -6.8 -4.0825 | overlap 60633 GGGGGAACTAAAGAA GGAG TCC CTCC TCCAAAGAATACTGT TERM 90 60709 - 60685 - G 80 -11.5 -2.69073 | opp_overlap 60685, overlap 60682 60681 AGTGAGAACAACGTA GAGGGGCTA GTTTTTT TAGCCCCTC TTTAATGACAGCTTC TERM 91 60685 - 60709 + g 93 -12.2 -3.737 | opp_overlap 60685 60682 60681 AGTGAGAACAACGTA GAGGGGCTAG TTTTT TTAGCCCCTC TTTAATGACAGCTTC CTA_0057 61277 - 60831 - | hypothetical protein TERM 92 61526 - 61536 + H 83 -5.4 -5.41143 | opp_overlap 61526 ATACTTAAAAAAAAA GCAA AGT TTGC TTTTTTTGAAAAATA TERM 93 61536 - 61526 - H 100 -5.4 -6.13 | opp_overlap 61526 ATACTTAAAAAAAAA GCAA AGT TTGC TTTTTTTGAAAAATA TERM 94 63816 - 63835 + G 76 -10.8 -2.66842 | opp_overlap 63792 63815 63819, overlap 63815 63813 TCTGCGGGAGCATAC GAAGAGAG ACCT CTCTCTTC CTCTTATCATTTTTT TERM 95 63916 - 63926 + G 71 -6.8 -4.15044 | opp_overlap 63912 63916 TTTGGAATGAAGGGA GGCT TCA AGCC TTTCTTGGAAGACGA kgd 61609 - 64320 + | alpha-ketoglutarate decarboxylase sucB_1 64324 - 65421 + | dihydrolipoamide acetyltransferase CTA_0060 66208 - 65450 - | hypothetical protein gcpE 67998 - 66190 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 96 67868 - 67904 + g 70 -6 -4.2717 | gap 1 TGTCTAACCGTTCCA TCCACATCTGTGGTGGC TGTA GTCGTCATAGAT-TGGA TTTTGATGGAATGCT TERM 97 67962 - 67975 + g 76 -6.7 -4.52857 | TTACTGGGAGGGTTT TGCGT CGAA ACGCA TTTTGTATACAGGGT CTA_0062 69252 - 68149 - | hypothetical protein fer 69607 - 69332 - | ferredoxin TERM 98 70391 - 70372 - g 82 -5 -5.40072 | opp_overlap 70373, overlap 70373 CGTCTGTTAAAAAAA GCTCTCTT TTAG AAGAGAGT GATTACTTCTCCGCC TERM 99 70390 - 70373 - g 75 -8.5 -3.83561 | opp_overlap 70373, overlap 70372 GTCTGTTAAAAAAAG CTCTCTT TTAG AAGAGAG TGATTACTTCTCCGC TERM 100 71127 - 71142 + G 71 -4 -4.89477 | CTTCCGTTAAAAATA TCAGAG AATT CTTTGA TTTTCTTATTGAGAG flhA 69789 - 71606 + | type III secretion system protein TERM 101 71944 - 71954 + G 82 -6.8 -4.91109 | AAGCAAGCGATTCGA GAGC TAT GCTC TTTTTATCATAAAAG fliA 71714 - 72475 + | RNA polymerase sigma factor sigma-28 tyrS 72634 - 73872 + | tyrosyl-tRNA synthetase TERM 102 74142 - 74170 + G 70 -9.7 -2.56747 | gap 1, opp_overlap 74138 74136 74135, overlap 74141 74139 TGATGAAATGATTGC CTCCCTGCTTCC TTTCTT GGAAG-AGGGAG ATATTCTCATCGATG gnd 73882 - 75324 + | 6-phosphogluconate dehydrogenase TERM 103 75359 - 75327 - T 72 -6.3 -4.50976 | opp_overlap 75333, overlap 75330 75333 TTTTAGAGTATAAAA CAAGAAGGCCCAGTA AAC TACTGGGTCTTTTTT ATGAAGCAATATAGC TERM 104 75356 - 75330 - T 80 -8 -4.36649 | opp_overlap 75333, overlap 75327 75333 TAGAGTATAAAACAA GAAGGCCCAGTA AAC TACTGGGTCTTT TTTATGAAGCAATAT TERM 105 75333 - 75353 + T 100 -11.9 -5.24129 | opp_overlap 75330 75327 75333 AGTATAAAACAAGAA GGCCCAGTA AAC TACTGGGTC TTTTTTATGAAGCAA TERM 106 75353 - 75333 - T 86 -9.7 -4.27842 | opp_overlap 75333, overlap 75330 75327 AGTATAAAACAAGAA GGCCCAGTA AAC TACTGGGTC TTTTTTATGAAGCAA lepA 77193 - 75385 - | GTP-binding protein LepA TERM 107 75419 - 75441 + g 71 -7 -4.12947 | overlap 75438 GCAACAAACGCCGTG TTCGGAATGG ATA CTTTTCCGAA TTCTTTCATTCGTTT TERM 108 75621 - 75643 + g 74 -10.6 -2.71188 | opp_overlap 75621, overlap 75620 75614 75623 75637 GCTGAGGAGGGATAA CATCTACGAG TTT CTCGCAGATG CTTCTGCCTTTTGAT TERM 109 75643 - 75621 - G 100 -12.8 -3.37796 | opp_overlap 75620 75614 75621 75623 75637 GCTGAGGAGGGATAA CATCTACGAG TTT CTCGCAGATG CTTCTGCCTTTTGAT TERM 110 77123 - 77111 - G 76 -7.7 -4.16016 | opp_overlap 77111 77114 GTACTTTCTAACAAA CGATC TGC GATCG TAGATTTCCCGTGGT TERM 111 77322 - 77351 + r 83 -7.8 -4.61527 | opp_overlap 77325, overlap 77325 TTTAAAGACAAAAGA AAAGCCCCGTCC GAGATA GAACGGGGCTTC TTTTTAGAGAATTTT TERM 112 77348 - 77325 - R 100 -11.7 -5.2894 | opp_overlap 77322 77325 AAAGACAAAAGAAAA GCCCCGTCC GAGATA GAACGGGGC TTCTTTTTAGAGAAT TERM 113 77325 - 77348 + r 86 -9.5 -4.40963 | opp_overlap 77325, overlap 77322 AAAGACAAAAGAAAA GCCCCGTCC GAGATA GAACGGGGC TTCTTTTTAGAGAAT CTA_0070 78959 - 77379 - | ADP,ATP carrier protein TERM 114 78415 - 78427 + g 72 -6.3 -4.39989 | AGAGCGTAGAAACGT TTAGC TTC GCTAA TTTTAGTAATTTCAT TERM 115 78999 - 79023 + r 84 -10.9 -3.71174 | TTTATTGTTAAGTTT TCTTTGTTGAT CAA ATCAACGAAGA TTTAAAGTATTTCTT TERM 116 79071 - 79045 - R 77 -6.7 -4.57569 | GTATTTCTTTAAAAA GTCGTGAAA AAATTTTGA TTTCACGAC TCCCTATTCCGGCTG CTA_0071 79786 - 79310 - | hypothetical protein TERM 117 79533 - 79549 + g 70 -7.9 -3.58343 | opp_overlap 79533 CTGCGCTTTTTAGAA CCTCGAG GAG CTCGTGG TTTAGGGCTAATGGA TERM 118 79815 - 79827 + H 71 -3.4 -5.09521 | GTGGGTAGTCTAGTT CTAC AGATG GTAG TTTTTGCTTTATTAA TERM 119 79954 - 79967 + H 84 -2.4 -5.72207 | TTGCTTTTTTCGCAA TCTC ATTTTA GAGA TTTTTTTGATTTGGA TERM 120 80300 - 80312 + H 73 -2.7 -5.18726 | CAGGAGGCTTGTATC CTTTA AAA TAGAG TTTTTCTTATGACCC ytgA 80445 - 81425 + | manganese-binding protein TERM 121 81598 - 81630 + GF 76 -7.9 -4.09864 | gap 1, overlap 81600 GGACTGATTCGTGCT TCTTCTGGCCAAAG CTTGTT CTTTGGTCAG-AGA TTTTCCAAGGTACAT TERM 122 81600 - 81629 + GF 74 -9.4 -3.05597 | overlap 81598 ACTGATTCGTGCTTC TTCTGGCCAAAG CTTGTT CTTTGGTCAGAG ATTTTCCAAGGTACA TERM 123 81840 - 81866 + GF 84 -6.5 -5.0133 | opp_overlap 81840 TCGTCAAATAGGTAA GCTCTCTGGAG GACAA CAACAGAGAGC TTTTTTAGCGCGGTC ytgB 81343 - 82197 + | hypothetical protein TERM 124 83191 - 83175 - g 75 -5.2 -4.81212 | TTTACGAGAACAAAA TACCTA TCAAG TAGGTA TGAGAGATTTTGTTC ytgC 82198 - 83553 + | MntB TERM 125 83559 - 83573 + G 74 -10 -3.18433 | overlap 83557 TGGTTGCTAGTATTT CTCCGT ACT ACGGAG TATCATTTTTAGAGT TERM 126 83859 - 83877 + G 75 -6 -4.65078 | TCTCAACAACTTTAC TGACTGGA GCA TCCATTCA TTTTATTCGGAATGT ytgD 83543 - 84499 + | ABC transporter ATP-binding protein dxr 84526 - 85665 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase CTA_0078 88644 - 87667 - | esterase yaeL 85861 - 87720 + | M50 family membrane endopeptidase TERM 127 87863 - 87881 + gT 70 -8.2 -3.37761 | TCTTCTGGGACTTGG GTAAGAGC AGA GCTTTTAC TTCCGTTTCTTAGGA TERM 128 88782 - 88763 - TR 72 -5.1 -4.78266 | opp_overlap 88763, overlap 88751 AAATAAAACAACAAA GTTTGTT TCAATT AACAAAC AGTTTTTGCGAAGGA recF 89899 - 88802 - | recombination protein F TERM 129 88983 - 88965 - G 91 -11.8 -3.51924 | TGTTGATCTAGACAA GCATGGAT GTC ATCCATGC ACAGAATAGGATGGA TERM 130 89805 - 89839 + g 81 -10.8 -3.28924 | opp_overlap 89809 89816 GTCTTTCCTTGTGCA TTAAGACCGAAGATGG AAT TCATCTCCGGTCCTAA TTCTAAACGAAGATC TERM 131 89835 - 89809 - G 95 -13.1 -3.14132 | opp_overlap 89805, overlap 89816 TTCCTTGTGCATTAA GACCGAAGATG GAATT CATCTCCGGTC CTAATTCTAAACGAA dnaN 91149 - 89899 - | DNA polymerase III subunit beta smpB 91279 - 91734 + | SsrA-binding protein apbE 92662 - 91712 - | thiamine biosynthesis lipoprotein ApbE precursor TERM 132 92031 - 92052 + gT 77 -6.5 -4.63479 | overlap 92028 ACAGCCCAAGATCTT CCGGAAGGA TGTT TCCCTCTGG TTTTGATTTCTCCTC TERM 133 92483 - 92463 - GT 82 -8.4 -4.3534 | opp_overlap 92475 TTCCAATTATTAAAA GTTTGATC GATAT GATCAAAC ACTCGATCAATTTCC folD 93495 - 92632 - | methenyltetrahydrofolate cyclohydrolase CTA_0084 94056 - 93613 - | hypothetical protein ltuB 94333 - 94626 + | late transcription unit B protein TERM 134 94762 - 94716 - g 100 -17.6 -3.54129 | overlap 94718 94733 TATATTGGTCTCAAA GACCGCCCAGTAATAAAGATCT CCA AAATCTTTATCACTGAGCGGTT AGGCATGAGTGCCTG TERM 135 94760 - 94718 - g 100 -20.2 -3.34715 | overlap 94716 94733 TATTGGTCTCAAAGA CCGCCCAGTAATAAAGATCT CCA AAATCTTTATCACTGAGCGG TTAGGCATGAGTGCC TERM 136 94853 - 94873 + G 100 -12.6 -5.93809 | TTTTTTGGTTTTTTT CGCAAGGC CCATA GCCTTGCG TTTTTTTTGTCCAAA CTA_0086 94683 - 94979 + | hypothetical protein TERM 137 96442 - 96420 - g 80 -9.8 -3.68261 | opp_overlap 96419 96416 96420, overlap 96413 GTAGAACATCGTAAA GGTCCTGGAG GAC CTCCAGACCC ATTGATTTATCAATA CTA_0087 94989 - 96671 + | hypothetical protein CTA_0088 96668 - 97150 + | hypothetical protein TERM 138 97165 - 97175 + T 95 -5.4 -5.81412 | ATCTTGCAATCCAAT CAAG CAG CTTG TTTTTTTTCGCTAGG CTA_0089 98249 - 97164 - | phosphatidylcholine-hydrolyzing phospholipase D (PLD) family protein TERM 139 97838 - 97849 + g 75 -3 -5.1675 | AAGCGAGTTCTCCAT CTAT TGCC ATAG TTTTTTGATGCATGA CTA_0090 100158 - 98419 - | putative quinone decarboxylase TERM 140 98481 - 98499 + g 73 -8.2 -3.73072 | CCTCATCAGCTTCGA CTTCCTTA GGA TAAGGAGG TTTCATGAGGGCATT TERM 141 99679 - 99661 - G 70 -9.6 -2.85351 | overlap 99663 GCGCTGCATACGATA CATCCCTA AAT TAGGGACG CCATTCTCAGGAGAT TERM 142 100278 - 100238 - R 72 -9.1 -3.23332 | overlap 100236 CAGGGAGACAATAGA TATACGCATGCTGAGGGAA AAT CTTTCTCAGCATGCACATA GGAGACTAAAAACCC rpmB 100553 - 100284 - | 50S ribosomal protein L28 malQ 102285 - 100702 - | 4-alpha-glucanotransferase TERM 143 101896 - 101879 - G 81 -4.1 -5.41143 | opp_overlap 101879 TACTCTTGAAAAAAA TCTCTCT TCAT AGAGCGA ACTTTTTCATAATGT sycE 102729 - 102289 - | secretion chaperone lcrE 104032 - 102767 - | low calcium response protein E lcrD 106176 - 104050 - | low calcium response protein D sctU 107258 - 106176 - | type III secretion system protein TERM 144 107484 - 107472 - H 79 -4.8 -5.29445 | CCTTAATAATAAAAA GGCT GTGTT AGCC TTAAGAAAAAGCTGT ychF 107515 - 108615 + | translation-associated GTPase ribF 109529 - 108624 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 145 109484 - 109462 - GT 73 -2.7 -5.09895 | CACCCATCGAAAAAA CCTATAGTA ACAGA TTCTACAGG ATTAGAGGACGGGAG truB_1 109743 - 109486 - | tRNA pseudouridine synthase B truB_2 110212 - 109796 - | tRNA pseudouridine synthase B rbfA 110621 - 110250 - | ribosome-binding factor A infB 113306 - 110628 - | translation initiation factor IF-2 TERM 146 111215 - 111235 + gr 70 -2.6 -4.97957 | AACCTTGAACATCTG CTTTGATA ATCAG TTTCAAAG TTTTCTTGTTCTGTA TERM 147 111278 - 111293 + gr 70 -7.6 -3.6761 | AGTTTGGTCGTTTTT TCTGCA AAGC TGCAGA TCTTTGTTGGCCAGC TERM 148 112301 - 112322 + gr 76 -7.3 -4.33808 | opp_overlap 112299 112301, overlap 112317 TGCCATGAATAAAGA GCTTCTGAA TAAG TTCTGAAGC TTTTAGCTTCATTTC TERM 149 112322 - 112301 - GR 70 -7.3 -3.72374 | opp_overlap 112301 112317, overlap 112299 TGCCATGAATAAAGA GCTTCTGAA TAAG TTCTGAAGC TTTTAGCTTCATTTC TERM 150 112317 - 112333 + gr 77 -9.5 -3.53091 | opp_overlap 112301 112299, overlap 112301 CTTCTGAATAAGTTC TGAAGCT TTT AGCTTCA TTTCAGCAGCAAGAT TERM 151 112550 - 112560 + gr 79 -8.2 -4.15654 | GATCTCGTTCAGATC CGCG CTT CGCG TTATTATTGTTGTTC TERM 152 113056 - 113084 + gr 100 -12.5 -3.65812 | opp_overlap 113052 113053 GCAAATGAAGAGCGA TCTTTTGCGCGAA TTC TTCGCGCAGTAGA TTCTGTTGCGCCCGA TERM 153 113268 - 113280 + gr 71 -4.1 -4.75404 | CTGTGCGTTCTTAAT CTTCA ACT TGAGG TTTTTCGTCAACTTT nusA 114567 - 113263 - | transcription elongation factor NusA TERM 154 113790 - 113804 + gr 76 -10 -3.14344 | GAATGATATTTTTGA TGCGAG ATC CTCGCA TTCCTACAAAAGCTC TERM 155 114620 - 114643 + r 100 -12.5 -3.90045 | opp_overlap 114612 114622, overlap 114615 AAAATAATGCTAACG GAGCAGAGC CCTAGA GCTCTGCTC TTATGTTTGCTCTTC TERM 156 114641 - 114622 - R 73 -10 -2.55818 | opp_overlap 114620 114615, overlap 114612 AATAATGCTAACGGA GCAGAGCC CTAG AGCTCTGC TCTTATGTTTGCTCT rpsA 116394 - 114685 - | 30S ribosomal protein S1 TERM 157 115595 - 115610 + g 70 -7.6 -3.61178 | overlap 115587 ATGACTTCCAATTCT TGGTTG AGTT CAACCA TTTCGGATGGGTGAC trxB 116639 - 117712 + | thioredoxin reductase acpS 117700 - 118059 + | 4'-phosphopantetheinyl transferase CTA_0107 118521 - 118060 - | hypothetical protein TERM 158 118271 - 118252 - G 70 -7.2 -3.79113 | ACGTTTGGATAAGAA GGACCTTT TAAT AAAAGTCC ACGGGGAAATTTTTT TERM 159 118553 - 118601 + H 91 -12.8 -3.16564 | gap 1, opp_overlap 118574, overlap 118559 GAAAAGAGGGAGTAT GCCAAAGCTTATTGATT-AGAAC AAGG GCTCTTGATTAATAAGCTTTGGC TTCGTAGGATGAGGG TERM 160 119072 - 119055 - g 95 -5.5 -5.89827 | AAGGATCAAAAAAAA CCTTCGA CTCC TCGAGGG GAGATGCTTTCAGGT CTA_0108 118656 - 119117 + | hypothetical protein CTA_0109 119152 - 120048 + | HAD family phosphatase/phosphatase fabI 120934 - 120038 - | enoyl-(acyl carrier protein) reductase CTA_0111 121172 - 121552 + | hypothetical protein TERM 161 121694 - 121710 + G 81 -9.5 -3.78436 | opp_overlap 121685 CTAATAGGCGATGCC GTTGATG GAA CATCAAC TTCTTCATCTCCATT CTA_0112 121598 - 123142 + | hypothetical protein TERM 162 123239 - 123200 - T 79 -10 -3.48593 | gap 1, opp_overlap 123201, overlap 123201 123203 GAGGGCTTTATATAA TGAGACCGAGCTTCC-CAT TCT AAGCGGAGGCTCGGTCTCT TTTTTGTATCGGATT TERM 163 123238 - 123201 - T 91 -13.5 -2.68942 | gap 1, opp_overlap 123201, overlap 123200 123203 AGGGCTTTATATAAT GAGACCGAGCTTCC-CAT TCT AAGCGGAGGCTCGGTCTC TTTTTTGTATCGGAT TERM 164 123201 - 123238 + T 100 -15.7 -5.37043 | gap 1, opp_overlap 123200 123201 123203 AGGGCTTTATATAAT GAGACCGAGCTTCC-CAT TCT AAGCGGAGGCTCGGTCTC TTTTTTGTATCGGAT TERM 165 123236 - 123203 - T 76 -10.3 -2.88822 | gap 1, opp_overlap 123201, overlap 123201 123200 GGCTTTATATAATGA GACCGAGCTTCC-CAT TCT AAGCGGAGGCTCGGTC TCTTTTTTGTATCGG yceC 124166 - 123342 - | tRNA pseudouridine synthase A TERM 166 124597 - 124619 + G 80 -11.4 -2.71712 | opp_overlap 124597, overlap 124596 124602 ATTGGGTCTTATACA GCAAATGCGA TCC TTGCATTTGC ATTTAAGCAAAAAAA TERM 167 124619 - 124597 - g 70 -9.2 -2.87211 | opp_overlap 124597 124596 124602 ATTGGGTCTTATACA GCAAATGCGA TCC TTGCATTTGC ATTTAAGCAAAAAAA mutY 124213 - 125319 + | A/G-specific adenine DNA glycosylase TERM 168 125349 - 125363 + F 85 -2.8 -5.71712 | overlap 125350 TAGTCTTTTTTCGAC TCTTTG CAG CAGAGG TTTTTTTATATGAAC ybgI 125373 - 126128 + | NIF3-related protein CTA_0116 126929 - 126141 - | hypothetical protein TERM 169 126192 - 126209 + g 87 -4.9 -5.47218 | gap 1, overlap 126196 TTCATTGGTAAGATT CGAAGGAA ATG TTCCT-CG TTTTTTTAGATAAGA TERM 170 127025 - 127001 - R 100 -12.2 -5.86332 | GGAATCTAAAAAAAA GCCTCGTTCC TTTTG GAAACGAGGC TCGAAGAATCTATTT groEL 128691 - 127057 - | chaperonin GroEL groES 129037 - 128729 - | co-chaperonin GroES pepF 131035 - 129209 - | oligoendopeptidase F TERM 171 130620 - 130642 + g 100 -13.6 -3.14132 | TCCTGAAGTTCGGGA GAGGCTAATA GCA TATTAGCCTC TTGCTGAGGGAGGGC TERM 172 133044 - 133058 + G 75 -8.6 -3.76373 | opp_overlap 133043 133039 133044 GTCTTTAGAAGAAAG GGTTGT CGG ACAACC TTTCGCTATTGCCGC TERM 173 133176 - 133198 + G 82 -5.7 -4.93877 | gap 1, opp_overlap 133176 GGTAGGGAAAACTGA GCT-TGCTAA AGCA TTAGCAGAGC TTTTATTTAATAAGG clpB 131338 - 133941 + | ClpB TERM 174 134258 - 134285 + G 76 -7.8 -4.08939 | opp_overlap 134257, overlap 134279 AAATCGGAGGAAGAG CTCTTTGCAAAA TTGA TTTTGCCAAGGG TTTCTCTAGGTGTTC TERM 175 134299 - 134313 + G 71 -8.6 -3.54307 | GGTTTCTCTAGGTGT TCATCG GGA CGATGA TTTAGCGAGAGTGTT TERM 176 134334 - 134370 + G 74 -10.3 -2.59133 | gap 1, overlap 134333 134331 134328 134337 CGAGAGTGTTGGTGT TAGCGGAGCCTTCTGC GGAAGA GCAGAAGGCTC-GATA CTATTCATTGTATCT CTA_0121 133967 - 135427 + | hypothetical protein TERM 177 135469 - 135502 + F 80 -9.8 -3.6796 | gap 1, opp_overlap 135469 TATTTTAACAATTTA GATTCTTCAAAGCTC AGCGA GGGCTT-GAAGAATC TTGTTCAGGTGTATT incD 135613 - 136068 + | inclusion membrane protein D incE 136151 - 136549 + | inclusion membrane protein E incF 136554 - 136868 + | inclusion membrane protein F incG 136955 - 137458 + | inclusion membrane protein G TERM 178 137478 - 137513 + T 100 -15 -4.42788 | opp_overlap 137487, overlap 137487 GACATGTGATTCGCG TAGGAAAAAGAGGAGG GAGA CCTCCTCTTTTTTTTA TTTTGTAGAGTTCCG TERM 179 137487 - 137504 + T 100 -11.3 -6.37666 | opp_overlap 137487, overlap 137478 TTCGCGTAGGAAAAA GAGGAGG GAGA CCTCCTC TTTTTTTTATTTTGT TERM 180 137504 - 137487 - T 91 -11.3 -4.72272 | opp_overlap 137487 137478 TTCGCGTAGGAAAAA GAGGAGG GAGA CCTCCTC TTTTTTTTATTTTGT TERM 181 137614 - 137631 + T 91 -9.9 -4.83615 | opp_overlap 137614 TTTGCATTGCAAAAA GCTCCTA AGAC TAGGAGC TTTTTGTAGAGGGTG TERM 182 137631 - 137614 - T 89 -9.9 -4.62069 | opp_overlap 137614 TTTGCATTGCAAAAA GCTCCTA AGAC TAGGAGC TTTTTGTAGAGGGTG incA 138445 - 137624 - | inclusion membrane protein A TERM 183 137931 - 137949 + g 70 -6 -4.39329 | TCTGCTATGATTTCT TGCGAAAA AAG TTTGCGCA TTTCTTCTGTAGAGT CTA_0127 138763 - 138566 - | hypothetical protein TERM 184 138748 - 138730 - G 71 -9.6 -3.00544 | GAAAAGGAGGATAGA GGGAAACT CTT AGTTCCCC AAAAATAATTGCCAT araD 138847 - 139548 + | ribulose-phosphate 3-epimerase TERM 185 139656 - 139631 - g 93 -9.1 -4.49556 | overlap 139632 GTCTCAGGAAACAAA GGGGATACTTT TATT AAAGTATCCCT GCAGGCCGCTGGATC TERM 186 139655 - 139632 - g 95 -12.6 -3.29252 | overlap 139631 TCTCAGGAAACAAAG GGGATACTTT TATT AAAGTATCCC TGCAGGCCGCTGGAT TERM 187 139733 - 139721 - g 74 -7.7 -3.96449 | CAAGAGGTCAAAGAA GCTCA GTT TGAGC CAAGAAATTTAGAGT TERM 188 139875 - 139892 + G 79 -3.4 -5.37043 | overlap 139877 TTACCGTCTTTGCTT TAGTGC ATCAAG GCACTG TTTTTTCTATGGAGT efp_1 139535 - 140092 + | elongation factor P TERM 189 140232 - 140254 + G 72 -7.8 -3.84284 | overlap 140223 CAAGTATTCAGGAGC CAGTCTTTTA TGA TAACAGACTG TTTGCTGGATTTTCC accB 140105 - 140599 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 190 141574 - 141560 - g 70 -2.8 -4.91712 | overlap 141561 GCTAAGGGAGAAAAA CTGCCT TGG AAGCAA AAGAATATAGAGTTT accC 140603 - 141976 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 191 141956 - 141979 + F 100 -2.4 -6.19302 | opp_overlap 141958 141959, overlap 141958 141959 GGTAGCACCTTTTTA AATTTAGCTG ATGG CAGCTAACTA TTTTTTTTATTATGT TERM 192 141958 - 141977 + F 72 -5 -4.71468 | opp_overlap 141958 141959, overlap 141956 141959 TAGCACCTTTTTAAA TTTAGCTG ATGG CAGCTAAC TATTTTTTTTATTAT TERM 193 141959 - 141976 + F 71 -8.5 -3.39221 | opp_overlap 141959 141958, overlap 141958 141956 AGCACCTTTTTAAAT TTAGCTG ATGG CAGCTAA CTATTTTTTTTATTA rplM 142199 - 142651 + | 50S ribosomal protein L13 rpsI 142677 - 143066 + | 30S ribosomal protein S9 TERM 194 143099 - 143132 + T 100 -14.1 -4.56597 | opp_overlap 143106 143123, overlap 143093 143101 143106 TATTGGAGTGCGTTT CAGAAAAGCCTTCTT TCAA AAGAAGGCTTTTCTA TTTTTAGGAACGCCA TERM 195 143101 - 143130 + T 100 -16.7 -3.90048 | opp_overlap 143106 143123, overlap 143093 143099 143106 TTGGAGTGCGTTTCA GAAAAGCCTTCTT TCAA AAGAAGGCTTTTC TATTTTTAGGAACGC TERM 196 143125 - 143106 - T 90 -10.8 -4.36914 | opp_overlap 143093 143101 143099 143106, overlap 143123 GTGCGTTTCAGAAAA GCCTTCTT TCAA AAGAAGGC TTTTCTATTTTTAGG TERM 197 143106 - 143125 + T 93 -10.8 -4.98672 | opp_overlap 143106 143123, overlap 143093 143101 143099 GTGCGTTTCAGAAAA GCCTTCTT TCAA AAGAAGGC TTTTCTATTTTTAGG ydhO 143965 - 143114 - | chitinase TERM 198 143247 - 143277 + g 79 -7.7 -4.30844 | gap 1 ACTTTCCCTATTTTT TC-CGCAGCATGAA TGAA TTCATGCTCCGAGA TTTTCATCATAACAT TERM 199 143556 - 143544 - G 72 -6.3 -4.27211 | overlap 143539 GCGAAAGAAACTAAA TCTCT TAG AGAGA ATGAAGAATTTAAAA TERM 200 144021 - 143994 - R 71 -6.4 -4.05389 | opp_overlap 143996, overlap 143996 TAGAGACATCACAAA GAGGACTAAAAA GAGG TTCTTAGTCCTT GTTGAACACGACTAT TERM 201 144019 - 143996 - R 74 -9 -3.61175 | opp_overlap 143996, overlap 143994 GAGACATCACAAAGA GGACTAAAAA GAGG TTCTTAGTCC TTGTTGAACACGACT adk 144798 - 144061 - | adenylate kinase glnP 145004 - 145648 + | GlnP glnQ 145645 - 146346 + | hypothetical protein TERM 202 146378 - 146366 - T 72 -7.7 -3.85817 | ATTCTGTTTCAGAAA CTTCC CAC GGAAG AGGAGAGACTGTTTG CTA_0138 149765 - 146349 - | hypothetical protein TERM 203 147520 - 147532 + g 91 -4.8 -5.71712 | opp_overlap 147518 147520 GATAATAGAGAGAGA CAGG AATAG CCTG TTTTTTTATCTAAGC TERM 204 147674 - 147698 + g 75 -7.2 -4.24342 | ATTGTAATGATCCAT GAGTTTTCTC AGTCA GAGACAACTC TTTATTCATAACAAA TERM 205 147726 - 147715 - G 78 -5.8 -4.79352 | opp_overlap 147715 TTATTCATAACAAAA CGGA AGTC TCCG GTAAGAGCATCCGTT CTA_0139 151039 - 149762 - | hypothetical protein TERM 206 149949 - 149965 + g 72 -6.5 -4.33258 | opp_overlap 149952, overlap 149952 TTCGCAATGTTATGA GAAGGCT TAT AGCCCTC TTTGTATTTAAGAAT TERM 207 150498 - 150486 - G 95 -7.7 -4.94962 | ACAATGTAAATAAAA GCCAT GGA ATGGC TGAAACTAAATAGTT CTA_0140 151920 - 151117 - | metallothionein family protein TERM 208 151185 - 151155 - G 95 -7.6 -5.06472 | opp_overlap 151163 AGATAAACAAGAAAA GCGGAAACTCCTTG CGA CAAAGATTTTCTGC TCGAGCCCTCTTCCC TERM 209 151194 - 151206 + g 74 -4.1 -5.00884 | overlap 151192 151194 TTTCTGCTCGAGCCC TCTTC CCT GAGGA TTTTTTAGGGGAGAT CTA_0141 152375 - 152788 + | hypothetical protein TERM 210 152971 - 152986 + G 76 -6.8 -4.48449 | TAACACCAGTGGTAT GCTCTC CAAT GGGAGC TTTCTGTTTTGCTCA TERM 211 153524 - 153542 + G 84 -5.2 -5.33405 | overlap 153526 CTGTGCTTTATTAGC TTCTGCGG TAA TCGCAGCA TTTTTCTTTGGTGCA CTA_0142 152847 - 153749 + | hypothetical protein CTA_0143 154019 - 154738 + | carboxylesterase ywlC 154757 - 155602 + | sua5/YciO/YrdC/YwlC family protein TERM 212 155736 - 155753 + G 74 -4.2 -4.93877 | TGCACCACATTAGAT GAACAA AACCAA TTGTTC TTTTCTTTAATAGAG CTA_0145 155580 - 156527 + | microsomal dipeptidase oppA_1 157804 - 156524 - | hypothetical protein TERM 213 157561 - 157551 - G 75 -3.2 -5.1244 | TTACGAATACAAAAA CGAT AAA ACCG CCCGTCTTCCGAAAT ypdP 157981 - 158667 + | hypothetical protein secA_1 158851 - 159297 + | preprotein translocase subunit-like protein TERM 214 159571 - 159588 + F 100 -9.1 -5.67967 | TCGATTATTTGCGAA GCTTGGG TGCT CCCAGGC TTTTTTTATGCTCGT TERM 215 159843 - 159825 - g 71 -6.8 -4.17316 | opp_overlap 159825 ATTTCCGCAAAAGAA TCCTTTTC TGT GAAAAGAA ATGTTGATGTGAATG TERM 216 160488 - 160510 + G 100 -12.1 -4.45771 | opp_overlap 160487 AAGGGCGGAGACTAT GTGGACAAG TCCGC CTTGTCCAC TTTATATTTTGGAGT CTA_0151 159696 - 160553 + | hypothetical protein CTA_0152 160555 - 161397 + | hypothetical protein CTA_0153 161397 - 162254 + | hypothetical protein TERM 217 162276 - 162301 + F 83 -9.8 -3.88001 | CCTTTTCTATTTACA CCGCTTAGCT TGCTTT AGTTAAGCGG TTCCTTTTTATCAAA CTA_0154 162440 - 164284 + | serine/threonine-protein kinase PKN1 TERM 218 166127 - 166112 - g 76 -10.4 -2.94705 | overlap 166107 GAGAACGCAAGCAGA GGAGCG TATC CGCTCC CTAGGGGGGAAAGTG TERM 219 166167 - 166140 - g 71 -8.4 -3.55444 | overlap 166141 166144 TCCCTAGGGGGGAAA GTGAGCTCTTCG GTAT CGAAGAGCACAT ATGCCGTCATAGCGG TERM 220 166166 - 166141 - g 83 -11.9 -2.73124 | overlap 166140 166144 CCCTAGGGGGGAAAG TGAGCTCTTCG GTAT CGAAGAGCACA TATGCCGTCATAGCG TERM 221 166163 - 166144 - g 83 -12.2 -2.64472 | overlap 166141 166140 TAGGGGGGAAAGTGA GCTCTTCG GTAT CGAAGAGC ACATATGCCGTCATA ligA 164295 - 166286 + | NAD-dependent DNA ligase LigA TERM 222 167501 - 167490 - g 82 -3 -5.49568 | AATCCAAAACAAAAA TCTT GATC AAGA CTCTCTACGAAAACT TERM 223 168494 - 168475 - g 74 -6.4 -4.43911 | opp_overlap 168478, overlap 168478 AAAGTTCAAGCAAAA GAAGCCTC GTTA GAGGCTTT AACAAAGGGCGAACA TERM 224 168491 - 168478 - g 79 -8.1 -4.32402 | opp_overlap 168478, overlap 168475 GTTCAAGCAAAAGAA GCCTC GTTA GAGGC TTTAACAAAGGGCGA TERM 225 169240 - 169250 + G 71 -6.8 -4.183 | GCAGAATTACGGGTA GCTG AAT CAGC TTTATTAGGAGTTCA TERM 226 169867 - 169855 - g 71 -4.1 -4.82678 | CTACAAAAAGTAAAA GCTCT GCT AGAAC TAAATATGTGTTTAG CTA_0156 166384 - 170733 + | hypothetical protein TERM 227 170759 - 170739 - T 100 -8.2 -6.01369 | opp_overlap 170740, overlap 170740 GAAAGAATAAAAAAA GGGGGGCT GCTAA AGCCCCCT TTTTAGTTAGGATAC TERM 228 170740 - 170758 + T 100 -11.7 -4.87291 | opp_overlap 170739 170740 AAAGAATAAAAAAAG GGGGGCT GCTAA AGCCCCC TTTTTAGTTAGGATA TERM 229 170758 - 170740 - T 90 -11.7 -4.17161 | opp_overlap 170740, overlap 170739 AAAGAATAAAAAAAG GGGGGCT GCTAA AGCCCCC TTTTTAGTTAGGATA mhpA 172319 - 170796 - | FAD-dependent monooxygenase TERM 230 171171 - 171222 + g 80 -11.6 -2.71681 | gap 1 ATCACTAGCTTCATA TTTCGATGC-GCGGTGGGAGGGATA GTA TAGCTCTCCTTCCGCAGCATCGAGC TGCTTACACCCCTTA TERM 231 172503 - 172482 - R 100 -14.5 -4.7033 | opp_overlap 172486 TAATGGAAGAGAAAA GAGAGGCTG AACC CAGCCTCTC TACGAAAACAAACTA CTA_0158 173466 - 172519 - | alpha/beta hydrolase family protein TERM 232 173509 - 173495 - H 86 -8.6 -4.57569 | opp_overlap 173495 173494 TTATTTTTTCAAAAA GCTTCT AAA AGAAGC GTTGATTTCTGCATA rpmG 173865 - 174023 + | 50S ribosomal protein L33 TERM 233 174123 - 174105 - g 71 -4.6 -4.67234 | ATCTAATTCCAAAAA GAAAAAGA CTC TCCTCTTC CATAGTTTCTGCTTT TERM 234 175081 - 175096 + G 70 -2.6 -5.04385 | TTGGGAAATCTCTTC CTTATA TGAT TATGAG TTTTTTAAGCCTATC TERM 235 175366 - 175350 - g 72 -9.5 -3.15544 | opp_overlap 175350 175349 TTTTAGCTGCATTAA CCCTAAA AAA TTTAGGG GTTTTGACGCATTGG TERM 236 175350 - 175366 + G 71 -9.5 -3.06569 | opp_overlap 175350, overlap 175349 TTTTAGCTGCATTAA CCCTAAA AAA TTTAGGG GTTTTGACGCATTGG CTA_0160 174059 - 175570 + | lipoprotein release inner membrane protein TERM 237 176233 - 176201 - g 100 -14.9 -4.17023 | opp_overlap 176200 GGAACTAGCTGAAAA GTGCCACCGAGAAGA GAT TCTCCGCGATGGCAC CTTAATGCAGCGACA CTA_0161 175575 - 176252 + | lipoprotein release atp-binding protein CTA_0162 178835 - 176403 - | MAC/perforin family protein TERM 238 178525 - 178535 + g 71 -6.8 -4.18042 | ATTTCTTCTAGGAGC TCCG CAT CGGA TTTCATTTGTATAGA CTA_0163 180034 - 179021 - | phosphatidylcholine-hydrolyzing phospholipase D (PLD) family protein TERM 239 179369 - 179344 - G 80 -10.5 -3.53012 | opp_overlap 179323 179350 TTTTTCTTTCGTAAA GAGGAAGTTGG ATAC CCAACTTGCTC AGTAGTTTGCATGTA TERM 240 180549 - 180573 + r 100 -15.1 -3.59979 | opp_overlap 180554, overlap 180554 TAGATGCTTTCCTCT GAGAAGGCAGG AAA CTTGCCTTCTC TTTCGACTACAAAAC TERM 241 180554 - 180568 + r 72 -7.8 -3.82946 | opp_overlap 180554, overlap 180549 GCTTTCCTCTGAGAA GGCAGG AAA CTTGCC TTCTCTTTCGACTAC CTA_0164 181535 - 180597 - | phosphatidylcholine-hydrolyzing phospholipase D (PLD) family protein CTA_0165 181756 - 181415 - | phosphatidylcholine-hydrolyzing phospholipase D (PLD) family protein CTA_0166 183260 - 182049 - | phosphatidylcholine-hydrolyzing phospholipase D (PLD) family protein CTA_0167 184100 - 183384 - | phosphatidylcholine-hydrolyzing phospholipase D (PLD) family protein TERM 242 183551 - 183527 - GR 84 -10.1 -3.75053 | opp_overlap 183519 GATAGATGAAGATAA GGTCTTCTATA TTG TATTGAAGACC TCGGACAGTCCAGTT CTA_0168 184894 - 184043 - | hypothetical protein TERM 243 185111 - 185089 - R 82 -9.2 -4.04206 | overlap 185092 CTATTGTGAGAGAAA GAGGCAGA GGGATGG TCTGCCTC CGCGAGAACTTAGAA CTA_0169 185624 - 185121 - | hypothetical protein TERM 244 185234 - 185247 + g 78 -5.3 -5.00467 | TTTCTTTAGCTATAT CTTGA CAGA TCAAG TTTTCTTCTTCTTGA CTA_0170 186363 - 185617 - | hypothetical protein TERM 245 186430 - 186440 + r 79 -8.2 -4.07687 | opp_overlap 186419, overlap 186419 GAAAGCGACCTTAGC CGCG TTT CGCG TTTTAACAAAACGAT CTA_0171 186750 - 186511 - | hypothetical protein CTA_0172 186980 - 187507 + | hypothetical protein TERM 246 187566 - 187576 + G 73 -8.2 -3.62723 | overlap 187568 TCATATTTTTTCTAT GCGC AAA GCGC TTGCTTATTTAGATA CTA_0173 187564 - 188619 + | hypothetical protein CTA_0174 188672 - 188932 + | hypothetical protein CTA_0175 189402 - 189905 + | adherence factor CTA_0176 190142 - 191194 + | adherence factor CTA_0177 191198 - 191488 + | adherence factor CTA_0178 191517 - 192641 + | adherence factor CTA_0179 192673 - 193533 + | adherence factor CTA_0180 193542 - 194117 + | adherence factor CTA_0181 194126 - 194485 + | adherence factor trpR 194541 - 194825 + | Trp operon repressor TERM 247 194960 - 194944 - g 78 -9.5 -3.6608 | opp_overlap 194944 AGCATGCCATGCAAA TCAGCTT TTC AAGCTGA TTGCTTCCAAGATAT TERM 248 194944 - 194960 + G 74 -9.5 -3.34522 | opp_overlap 194944 AGCATGCCATGCAAA TCAGCTT TTC AAGCTGA TTGCTTCCAAGATAT TERM 249 194999 - 195027 + G 73 -8.2 -3.59946 | gap 1 TCATCCTCTTACAGC GTGCCTGGCTTTC TTTT GAAAGCT-GGCGC TTATCTACTTGGCGA CTA_0183 194866 - 195045 + | hypothetical protein TERM 250 195078 - 195103 + F 76 -5.5 -5.00884 | TTTATTTGATTAAGA GATGTTCTTAT AGAA GTAAGAGCGTC TTTTTTGCGCAGGAT TERM 251 195192 - 195173 - f 72 -5.8 -4.42653 | opp_overlap 195173 ATTTTATGGAGAAAA GATGTTCA AACA TAAACATC CTTTTGGGGGAGCGT trpB_2 195174 - 195362 + | tryptophan synthase beta chain trpB_1 195405 - 196352 + | tryptophan synthase subunit beta TERM 252 196473 - 196487 + G 70 -2.8 -4.93898 | AGGTGTCGATATTCT GGAACT AGG ATTTCC TTTTTCTGATCCTGT TERM 253 196738 - 196751 + G 71 -6.7 -4.16146 | opp_overlap 196737 196747 GCACCTTTATCACAC GGAGA AAAA TCTCC TTTTGAAGATCTTTT TERM 254 196772 - 196786 + G 81 -7.2 -4.64613 | AAGATCTTTTAGCTG TAGGAT TGG ATCCTA TTTTGCTTATTTCTG trpA 196345 - 196896 + | tryptophan synthase alpha chain TERM 255 197110 - 197145 + T 80 -9.8 -3.65314 | opp_overlap 197111 197117, overlap 197111 197113 CTGGATAATTTATGA ATATGAAGCCCAGATA TCGA TGCCTGGGCTTCATAG TTGTCTGTATAGATT TERM 256 197111 - 197144 + T 93 -13.3 -2.78465 | opp_overlap 197111 197117, overlap 197110 197113 TGGATAATTTATGAA TATGAAGCCCAGATA TCGA TGCCTGGGCTTCATA GTTGTCTGTATAGAT TERM 257 197144 - 197111 - T 100 -13.3 -3.23711 | opp_overlap 197111 197110 197113, overlap 197117 TGGATAATTTATGAA TATGAAGCCCAGATA TCGA TGCCTGGGCTTCATA GTTGTCTGTATAGAT TERM 258 197113 - 197142 + T 82 -11.5 -2.93455 | opp_overlap 197111 197117, overlap 197111 197110 GATAATTTATGAATA TGAAGCCCAGATA TCGA TGCCTGGGCTTCA TAGTTGTCTGTATAG TERM 259 197240 - 197227 - T 77 -5.9 -4.82901 | opp_overlap 197227 GTTTTTTTATAAAAA GCCCC TTAC GAGGC TTCTCTTTTCGAACA CTA_0187 197841 - 197332 - | hypothetical protein TERM 260 197571 - 197584 + g 72 -8.1 -3.90048 | overlap 197574 ATAACGTCATTGCTT GCTCG GCTT CGAGC TGTTTTTGCAACAAA TERM 261 197574 - 197586 + g 70 -5.5 -4.56597 | overlap 197571 ACGTCATTGCTTGCT CGGCT TCG AGCTG TTTTTGCAACAAAGC CTA_0188 198038 - 197847 - | hypothetical protein CTA_0189 198378 - 198106 - | hypothetical protein CTA_0190 198920 - 198465 - | hypothetical protein TERM 262 198803 - 198785 - G 77 -3.8 -5.18371 | overlap 198787 TCTCAGAAAAGAAAA TATGCCCA GAC TGAGCAGA AGTTACTTTTATTTG TERM 263 199908 - 199918 + G 82 -6.8 -4.86731 | TAGTTGGGTTACCCT GGAG CTC CTCC TTTTCTTTAGAAGAA TERM 264 199953 - 199942 - g 71 -4.4 -4.79953 | AGAAGAACAAAGAAA TCTC CCTA GAGA AAAATTATTTGATTA oppA_2 199115 - 200704 + | hypothetical protein dsbB 201138 - 200731 - | putative disulfide oxidoreductase dsbG 201851 - 201135 - | disulfide bond chaperone TERM 265 201335 - 201352 + g 73 -7.1 -4.19177 | AATTTATGCACTGTA TTAATCC TTTG GGATTAA TTTCTCTTCCGGAAT CTA_0194 201997 - 203211 + | hypothetical protein CTA_0195 203725 - 203213 - | hypothetical protein tauB 204561 - 203869 - | ABC transporter ATP-binding protein CTA_0199 205579 - 204869 - | hypothetical protein TERM 266 205622 - 205633 + H 89 -5.8 -5.55769 | opp_overlap 205622 GTTACTTTATGATAA CCTC GCAT GAGG TTTTTTGTTATAAGA TERM 267 206499 - 206512 + G 70 -5.3 -4.431 | CATATTGGTGTTTAT GCTTT TAGA AAAGC TTTTCTAAGTGAATA kdsB 205947 - 206711 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 268 208197 - 208207 + G 71 -4 -4.8543 | TGCTTGGCGTACAGT TTCA TCC TGAA TTTTTATCAAAATTA pyrG 206687 - 208306 + | CTP synthetase yqgF 208293 - 208739 + | Holliday junction resolvase-like protein TERM 269 208747 - 208761 + F 89 -10 -4.36914 | TATACTAGGATCCCT CATGGC AAA GCCATG TTTTATGAGAGAGAA zwf 208856 - 210379 + | glucose-6-phosphate 1-dehydrogenase devB 210404 - 211174 + | 6-phosphogluconolactonase dnaX_1 212043 - 211171 - | DNA polymerase III subunit delta' tdk 212668 - 212057 - | thymidylate kinase gyrA_1 215180 - 212670 - | DNA gyrase subunit A gyrB 217609 - 215195 - | DNA gyrase subunit B TERM 270 215747 - 215721 - G 100 -11.6 -4.2586 | GGATAGTAATACAAA GGATAAGCTCCG TCT CGGAACATATCC AAGAATTCAGAAAAT TERM 271 216509 - 216494 - G 71 -3.2 -5.00884 | opp_overlap 216495, overlap 216495 ATTTTCTTCAAAAAA TGTGGT TAAC ACCTCA CCACTAATTTGCTGA TERM 272 216998 - 216979 - G 71 -5 -4.59773 | opp_overlap 216982, overlap 216982 GGTCATCTTCAAAAA CAATCGTG ACTC CACGATTT AAAAATGCTAATTCT TERM 273 216995 - 216982 - G 76 -6.7 -4.41633 | opp_overlap 216982, overlap 216979 CATCTTCAAAAACAA TCGTG ACTC CACGA TTTAAAAATGCTAAT CTA_0209 217962 - 217612 - | hypothetical protein CTA_0210 218680 - 218108 - | hypothetical protein TERM 274 218324 - 218347 + g 71 -8.2 -3.54543 | opp_overlap 218323 218326 TTTGACTAATTCAAC TACATGGCTG CCCA CAGCGATGTA TTTAGGAGCATGACT tgt 220024 - 218906 - | queuine tRNA-ribosyltransferase TERM 275 219649 - 219674 + g 74 -7.7 -3.98747 | overlap 219652 ATTTAAAGTGTACCC CGTCATCATTA ACTT TAATGATGGTG TTTCCTCCTTTTTTC TERM 276 219974 - 219985 + g 86 -3 -5.65513 | CTCTATCCGACCTAC TCTA GCCC TAGA TTTTTTTGATTGATG TERM 277 220143 - 220117 - R 93 -10.2 -5.14477 | opp_overlap 220120 GACATAGTGAAAAAA GCCCGAAGAAAA CCT TTGTCTTCGGAC TCACCCACTATTTGA mgtE 221563 - 220151 - | Mg2+ transporter TERM 278 221128 - 221114 - G 81 -4.3 -5.30575 | TAAAAAGGCAAAAAA CTCAT TGGTC ATGAG TCGCCCAGCCGTATT TERM 279 221763 - 221752 - R 75 -4.4 -5.09245 | opp_overlap 221752 221760, overlap 221727 221725 CGAAAACGACAAAAA GTCT TCCG AGAC TCTTAAACAAGAGTC TERM 280 221976 - 221994 + r 81 -10.4 -3.57144 | opp_overlap 221969 221967 GCAAAATCGCTTTAC CTGCTAAA AAC TTTAGCAG TTTAAAACTAAAAGC CTA_0213 223093 - 222002 - | hypothetical protein CTA_0214 223318 - 223638 + | putative transport protein gcp 223714 - 224730 + | O-sialoglycoprotein endopeptidase TERM 281 224919 - 224908 - gf 70 -5.8 -4.31433 | opp_overlap 224911 GATTGGTACAAGAAA CTCC TTCT GGAG AAGTCTTCCCTGCTT TERM 282 226158 - 226136 - gf 78 -5.6 -4.87328 | overlap 226129 CATAGAAAGACAAAA CGTCATAGAA CCC CTCTATCACG ACGTGTTCCATTATA oppA_3 224694 - 226250 + | hypothetical protein oppB_1 226409 - 227350 + | hypothetical protein oppC_1 227382 - 228227 + | hypothetical protein oppD 228220 - 229053 + | OppD oppF 229068 - 229811 + | hypothetical protein TERM 283 230658 - 230676 + G 82 -4.6 -5.36965 | overlap 230660 230669 GTTGCTTCCATTTGC GCTCTTTA TCC TAAAGAAC TTTTTTATCCTATTA CTA_0221 230118 - 230873 + | hypothetical protein TERM 284 232168 - 232186 + G 75 -8.8 -3.61609 | opp_overlap 232165 232168 AGGACTCACACACTA CGGATCTG GTC CAGCTCCG TTATACTTTGGATCC ybhI 230903 - 232318 + | 2-oxoglutarate/malate translocator TERM 285 232389 - 232410 + GF 78 -10.9 -2.64293 | overlap 232388 232385 232391 ACGCCTTCTTTGTGT CGGGAGCTT CAAA AAGCTCCTG CTCTTCTATTAACAG TERM 286 232391 - 232408 + GF 74 -9.9 -2.85947 | overlap 232389 232388 232385 GCCTTCTTTGTGTCG GGAGCTT CAAA AAGCTCC TGCTCTTCTATTAAC TERM 287 233891 - 233920 + GF 73 -5.7 -4.4352 | ACAAATACATTCTCC GGAGGATGCTCAT TCTG ATGATTTTCCTCC TTTAATTTTGTTTTT pfkA_1 232338 - 233999 + | diphosphate--fructose-6-phosphate 1-phosphotransferase CTA_0224 233948 - 234856 + | alpha/beta hydrolase pfkA_2 234838 - 236484 + | diphosphate--fructose-6-phosphate 1-phosphotransferase gseA 238025 - 236730 - | 3-deoxy-D-manno-octulosonic-acid transferase leuS 240481 - 238022 - | leucyl-tRNA synthetase TERM 288 238537 - 238524 - G 75 -5.3 -4.86001 | ACCATTTCATAAAAA CGATT CAAA AATCG TCTGCAACCAGCAAC TERM 289 238554 - 238570 + g 70 -2.9 -5.01422 | overlap 238556 CTGCAACCAGCAACT CCTTGGT TAG ACCAGAG TTTATTTTTATCTAA TERM 290 238921 - 238891 - G 80 -9 -3.91473 | overlap 238895 AGAAACGCGCATAAA GTAAGTGCAGTACA GCA TGTTCTGCACCTCC AATATACAGATCTAC TERM 291 238917 - 238895 - G 82 -10.6 -3.60798 | overlap 238891 ACGCGCATAAAGTAA GTGCAGTACA GCA TGTTCTGCAC CTCCAATATACAGAT TERM 292 240784 - 240795 + G 82 -5.8 -4.93318 | CTATAGTAGCTCGTG CCTC TAAA GAGG TTTTTGTAGATTCTC TERM 293 241547 - 241531 - g 70 -3.7 -4.87291 | opp_overlap 241531, overlap 241533 CACCCGAAGGAAAAA TCTTCCA AGC TGGAACA CTTTCAGGAAATCCT TERM 294 241710 - 241724 + G 75 -2.1 -5.27335 | ACATTGGTGCGATAT GGAAG CCTCT TTTCC TTTTTCTTTAACCCA hemL 240678 - 241946 + | glutamate-1-semialdehyde aminotransferase CTA_0231 242507 - 241938 - | hypothetical protein TERM 295 242007 - 241984 - G 73 -6 -4.51197 | overlap 241985 GATAACGAAGCAAAA CGCCCTCCAA GATG TTGGAGAACA TCGGACCACATTCTT TERM 296 242199 - 242188 - G 85 -4.4 -5.50723 | overlap 242190 CCAGCAAAAGAAAAA TCTC CTCC GAGA AATACGGACGGACAA CTA_0232 242972 - 242526 - | hypothetical protein rpiA 243690 - 242962 - | ribose-5-phosphate isomerase A CTA_0234 245431 - 243785 - | hypothetical protein TERM 297 243949 - 243961 + g 100 -6.3 -5.9873 | opp_overlap 243940 243949 AAAATGTAGAGAGAA CTCTT TCT AAGAG TTTTTTTTCTGATGA TERM 298 244627 - 244652 + g 71 -9.1 -3.35798 | overlap 244629 TGTCTTTCAAGTCTT TACTCACCAAA ATCC TTTGGTGAGTC TTCTCAATCAAAGAT TERM 299 244629 - 244650 + g 86 -11.7 -3.24924 | overlap 244627 TCTTTCAAGTCTTTA CTCACCAAA ATCC TTTGGTGAG TCTTCTCAATCAAAG TERM 300 245124 - 245108 - G 73 -7.3 -4.12456 | AGATGACTCCGAAAA GTGATCT TGC AGACCAC TACTCAAGAATTTAA TERM 301 245309 - 245291 - G 85 -9.6 -4.12474 | overlap 245278 AAGCAACAATAATAA TGCTGCAG CTG CTACAGCA GAGACTAACCCTATA TERM 302 245822 - 245807 - g 91 -4.7 -5.60993 | opp_overlap 245807 TGTGTTATAAAAAAA GAAGC TTTAAC GCTTC CTTCTGGAGACCTCG TERM 303 245834 - 245846 + G 86 -7.7 -4.58395 | CTTCCTTCTGGAGAC CTCGT ATC ACGAG TTTTTGCAGAATCAG dhnA 245735 - 246781 + | fructose-bisphosphate aldolase TERM 304 247962 - 247950 - g 73 -5.5 -4.64676 | opp_overlap 247955 GTACTCCGAATAAAA GAGCC TAA AGCTC AAAGACTTTATTCTG xasA 246795 - 248195 + | glutamate/gamma-aminobutyrate antiporter TERM 305 248689 - 248673 - g 72 -7.9 -3.74077 | TTTGATACAGCTAAA GCGGTAG GAG CGACCGC TGTCGCATTCGGACA ydaO 248289 - 249053 + | TtcA surE 249184 - 250035 + | stationary phase survival protein SurE TERM 306 250042 - 250067 + F 93 -10.6 -5.00616 | CTGGCTTAGTTATCT GTACGTTGAA ACGAAC TTCAACGTAC TTTTTTCAGCAAGAA ubiA 250147 - 251055 + | prenyltransferase ubiX 251052 - 251630 + | aromatic acid decarboxylase TERM 307 251616 - 251642 + T 80 -8 -4.50193 | opp_overlap 251614 251611 CTTATAAAAAGATGG GAGAACCCCC GCTAATA GGAGGTTCTC TTTTCGTTGATTACT yqfU 252523 - 251627 - | hypothetical protein TERM 308 252254 - 252233 - G 82 -6.7 -4.75219 | opp_overlap 252238 TAACCAGCAAGAAAA GATAATAAC CGCA GTTATCATC TGTACAACGAAGCAC CTA_0244 253368 - 252979 - | LAGLI-DADG endonuclease TERM 309 253495 - 253476 - R 100 -12.2 -6.08563 | opp_overlap 253476 AAGAGAGAAAAAAAA GCCTCTTC ATAA GAAGAGGC TTTTGCTCGGCAAAC TERM 310 253476 - 253495 + r 95 -12.2 -4.25104 | opp_overlap 253476 AAGAGAGAAAAAAAA GCCTCTTC ATAA GAAGAGGC TTTTGCTCGGCAAAC CTA_0245 254322 - 253510 - | hypothetical protein CTA_0246 255156 - 254713 - | hypothetical protein CTA_0247 255615 - 255247 - | hypothetical protein CTA_0248 256205 - 255714 - | hypothetical protein TERM 311 256441 - 256429 - R 74 -7.7 -4.01115 | overlap 256427 ATTTAGAAGAAAATA GACTC GAA GAGTC AGAACTAGCCAAAAT CTA_0249 256757 - 256488 - | hypothetical protein TERM 312 256644 - 256634 - G 78 -5.4 -4.98616 | TTAAAATAGCAAAAA TTCC TAA GGAA ACGGCAAATTCTATA TERM 313 257053 - 257069 + r 70 -2.9 -5.0925 | opp_overlap 257027 257055, overlap 257027 257044 257055 TGGTTAGCGTCTATA GATGCTT TAA GAGCAGC TTTTTCCTTTTCAGC CTA_0250 257618 - 257028 - | hypothetical protein TERM 314 257704 - 257690 - R 71 -6.4 -4.04209 | GCAAATCATTATAAA TCCGCA ACA TGCAGA ACTAAAGCGCCGTAA CTA_0251 258415 - 257768 - | hypothetical protein TERM 315 259857 - 259841 - g 84 -3.7 -5.5604 | overlap 259843 GTAATTAATAAAAAA TTTTCTG AAA CAGAAGA TCTCCCGCCCTGCTC CTA_0252 258641 - 259888 + | proton/sodium-glutamate symport protein TERM 316 261136 - 261119 - g 73 -8.5 -3.69447 | opp_overlap 261133 261133, overlap 261117 GCATCAAAAAACATA TTGCAGA ATCT TCTGCAA CCATTGCTGCGTTTC CTA_0253 260071 - 261543 + | sodium-dependent amino acid transporter TERM 317 261598 - 261622 + F 75 -6.4 -4.3953 | overlap 261589 261614 CTCCTTGGCCGATCG GGGCCTTCTA ATTCA TTGAAGGCTC TTTATTGTGATTCAC TERM 318 261810 - 261820 + G 71 -3.2 -4.92757 | ATCGTTACAGTTTGT GGAG GGT TTCC TTTTCTTCTTGCTGC incB 261648 - 261995 + | inclusion membrane protein B TERM 319 262215 - 262227 + G 82 -10.5 -3.7104 | TAATTTCTCTACATG GGGGC CAG GCCCC TTCTTCACTGTCCCT incC 262072 - 262608 + | inclusion membrane protein C TERM 320 265360 - 265374 + G 80 -6.4 -4.82819 | AAAGAAGAGCTTTCT CTTTGC GAT GCAGAG TTTTCTTCTGCTCTA CTA_0256 262666 - 265452 + | ADP,ATP carrier protein CTA_0257 265481 - 265894 + | Crp family transcriptional regulator TERM 321 265930 - 265900 - T 100 -12.6 -5.85737 | AGATCAATAAAAAAA CCCACAGTTACCTT TGG ATGGGAACTGTGGG CCTAAACTCTTTGTT TERM 322 265932 - 265958 + T 73 -7.4 -4.14472 | opp_overlap 265938, overlap 265938 ATGGGAACTGTGGGC CTAAACTCTTTG TTG CAGAGATTTTAG TTTTGACGCTCTTGG TERM 323 265938 - 265952 + T 70 -5 -4.67038 | opp_overlap 265938, overlap 265932 ACTGTGGGCCTAAAC TCTTTG TTG CAGAGA TTTTAGTTTTGACGC acpP 266188 - 265955 - | acyl carrier protein TERM 324 266326 - 266305 - R 100 -6.7 -5.90981 | CTATAGCAAAAAAAA TCTAGCTTT AAAT AAAACTAGA GTAACCAATCCCTAC fabG 267303 - 266557 - | 3-ketoacyl-(acyl-carrier-protein) reductase fabD 268226 - 267300 - | acyl-carrier-protein S-malonyltransferase fabH 269226 - 268243 - | 3-oxoacyl-(acyl carrier protein) synthase III recR 269364 - 269966 + | recombination protein RecR TERM 325 270053 - 270095 + F 76 -7.3 -4.21787 | gap 3, overlap 270082 TTTTGCTAGTGACCA GCAACCCCTCT-G-A-GTTC TCCCCC GAACCTGCCAGAGGGGTTGC TTTTCGGGCTTTTTT TERM 326 270082 - 270104 + F 89 -4 -5.73672 | overlap 270053 TTCTCCCCCGAACCT GCCAGAGGGG TTG CTTTTCGGGC TTTTTTTCGTTGTTT TERM 327 272070 - 272046 - g 82 -4.9 -5.40072 | overlap 272047 GTTTGCGCAAAAAAA CGTCCAGCTCT AAT AGACCCGGACC AGATTTAGACAGTAA TERM 328 272069 - 272047 - g 75 -8.4 -3.83561 | overlap 272046 TTTGCGCAAAAAAAC GTCCAGCTCT AAT AGACCCGGAC CAGATTTAGACAGTA TERM 329 272378 - 272388 + G 75 -5.4 -4.89477 | opp_overlap 272367 GAAACCACTGTTCGC GGTT ACA AACC TTTTATTATTGGACC yaeT 270341 - 272719 + | outer membrane protein/Omp85 analog TERM 330 272757 - 272723 - f 85 -12.3 -2.60212 | opp_overlap 272723 272729, overlap 272729 GGAGTATTCTAGAAT CCGAAAGGAGAAGGA GAGCA TCCTTCTCCTTTCAC CTATTGGTTATATTT TERM 331 272729 - 272751 + F 90 -12.1 -3.67918 | opp_overlap 272723 272729, overlap 272723 TTCTAGAATCCGAAA GGAGAAGGA GAGCA TCCTTCTCC TTTCACCTATTGGTT TERM 332 272751 - 272729 - f 90 -12.1 -3.69354 | opp_overlap 272729 272723, overlap 272723 TTCTAGAATCCGAAA GGAGAAGGA GAGCA TCCTTCTCC TTTCACCTATTGGTT CTA_0264 272788 - 273309 + | OmpH lpxD 273337 - 274401 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CTA_0266 275593 - 274403 - | hypothetical protein TERM 333 275179 - 275165 - G 74 -4.3 -4.9725 | opp_overlap 275165 AGGCGTATAGAAAAA CAGTT GTGCT AACTG TTGTCTAAAAAACTT TERM 334 275700 - 275713 + H 73 -8.1 -3.66908 | TTATATTTGCGAAGG CCGGA CCTT TCCGG TTACTTTTCCGCGCC TERM 335 276016 - 276032 + G 71 -8.7 -3.23853 | opp_overlap 276016, overlap 276014 TATATCGGTCAAGAA GCTGTTG CTA CAGCAGC TATTGCTTGCACAGG pdhA_1 275815 - 276837 + | pyruvate dehydrogenase E1 component alpha subunit TERM 336 277395 - 277372 - g 71 -8.2 -3.49858 | TGAATTAGACTACAA TCTTAAGGGA GAGG TCCCTTCAGA AGAATACCTGATCCC pdhB 276830 - 277816 + | pyruvate dehydrogenase E1 component beta subunit TERM 337 278082 - 278106 + G 73 -8.5 -3.63515 | opp_overlap 278082 278104 CAATATGATTTAAAA CAGCTCCTACC TTT GGAAGGAACTG TTGTTACAGATGCAG TERM 338 278106 - 278082 - g 93 -10.7 -4.23723 | opp_overlap 278082, overlap 278104 CAATATGATTTAAAA CAGCTCCTACC TTT GGAAGGAACTG TTGTTACAGATGCAG pdhC 277821 - 279110 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 339 279112 - 279130 + T 93 -11.8 -4.30987 | opp_overlap 279112 279115, overlap 279122 TACTTCTCAATTAAA GAAGGGAA TGT TTCCCTTC TTTCTTCTAAGAAGT TERM 340 279130 - 279112 - T 90 -11.8 -3.90588 | opp_overlap 279112 279122, overlap 279115 TACTTCTCAATTAAA GAAGGGAA TGT TTCCCTTC TTTCTTCTAAGAAGT TERM 341 279127 - 279115 - T 75 -7.7 -4.0825 | opp_overlap 279112 279122, overlap 279112 TTCTCAATTAAAGAA GGGAA TGT TTCCC TTCTTTCTTCTAAGA glgP 281581 - 279137 - | glycogen phosphorylase CTA_0271 281737 - 282087 + | hypothetical protein TERM 342 282135 - 282111 - T 75 -9.3 -3.31322 | gap 1 CCGAACGGTGTACAA GGAGGC-GGC GCAATT GCCTGCCTCC TACCTCTAGTCTTCT dnaA 283511 - 282141 - | chromosomal replication initiation protein TERM 343 283206 - 283236 + g 73 -5.4 -4.72497 | opp_overlap 283205, overlap 283208 CATGTTCGGATCAAT GTCCCCATACTTCA TAG TGAAGTATGCAGTC TTTTCTTGCTGGATC CTA_0273 285951 - 283588 - | putative inner membrane protein translocase component YidC TERM 344 285898 - 285885 - G 73 -5.3 -4.73635 | GATAACCGAAGAAAA TTTGG CAGC CCAAA AATGCCGCGCTTACC TERM 345 286037 - 286026 - R 80 -3 -5.63103 | CCCTAATCAAAAAAA CTTT GCAG AAAG ACAAAACCTCTCCAC TERM 346 286187 - 286213 + r 71 -9.6 -2.6583 | overlap 286184 ATAACCATCCCCCCT CTCTACATCAAA AAG TTTAATGTAGAG TCGCTTTCAGATGTG lgt 287079 - 286261 - | prolipoprotein diacylglyceryl transferase TERM 347 287126 - 287109 - H 81 -3.5 -5.61881 | overlap 287103 TCTCAAAAAGAAAAA CTTTTCT AAAT AAAAAAG ACTATGCCAAAAATT TERM 348 287165 - 287140 - H 83 -7.7 -4.63928 | AGACTATGCCAAAAA TTTTTTGCTAG CAAT CTTGCAAAAAA GATCTTCGCACGGTT CTA_0275 287330 - 287977 + | hypothetical protein TERM 349 288696 - 288676 - g 73 -8.9 -3.4252 | opp_overlap 288679, overlap 288680 CTTTATTTACGAGAA GGTACGGCA TAT TGCCGCTCC TGTGACCCTACATAT CTA_0276 287981 - 288751 + | CAAX amino protease CTA_0277 289342 - 288959 - | hypothetical protein CTA_0278 289531 - 290775 + | CBS domain-containing protein TERM 350 290795 - 290807 + G 71 -4.8 -4.60808 | CCCTTTTTCTGGTTA GGAG TGAAC CTCC TTTGTATTTTTGTCC TERM 351 291884 - 291863 - g 83 -8.8 -4.15453 | CAACTCATGTTAAAA CTTCTGGA TACTCC TCCAGAAG TAGGCGCCTCTATCA CTA_0279 290765 - 291979 + | hypothetical protein yfhO_1 293107 - 291983 - | hypothetical protein TERM 352 292966 - 292977 + g 71 -4.4 -4.86731 | overlap 292949 TTGAAGTTTCTTTAA CCAA TTTT TTGG TTTTCTTTCCAAAAC CTA_0281 293859 - 293113 - | protein phosphatase 2C CTA_0282 294181 - 294672 + | hypothetical protein dnaQ_1 294681 - 295379 + | DNA polymerase III subunit epsilon CTA_0284 295376 - 296146 + | hypothetical protein TERM 353 296667 - 296657 - g 74 -4 -5.02476 | AGACTTCTTAAAAAA TAAC AAA GTTA AGCTCTCTCAAAAAT CTA_0285 296139 - 296729 + | hypothetical protein msbA 298690 - 296750 - | ABC transporter, ATP-binding protein accA 299630 - 298656 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 354 298904 - 298914 + gr 76 -6.8 -4.43351 | overlap 298901 TTTTTAACATGGCAG CAGC ATC GCTG TTCTTTTTAGGATCT TERM 355 299535 - 299559 + gr 93 -2.9 -5.95539 | opp_overlap 299539, overlap 299539 TTTTTGAATCTCTGA AGAAGAAAGCA GGC TGTTTTCTTTA TTTTTTTCTTTAAAC TERM 356 299539 - 299555 + gr 86 -5.9 -5.36181 | opp_overlap 299539, overlap 299535 TGAATCTCTGAAGAA GAAAGCA GGC TGTTTTC TTTATTTTTTTCTTT CTA_0288 300944 - 299763 - | hypothetical protein ihfA 301364 - 301062 - | integration host factor alpha-subunit amiA 302363 - 301584 - | N-acetylmuramoyl-L-alanine amidase TERM 357 301724 - 301712 - GR 83 -9.1 -4.2231 | opp_overlap 301699 301712, overlap 301699 AACGAGCATCTAAAA GAGCG GCT CGCTC TTTAGAATTGGAAAG TERM 358 301712 - 301724 + gr 75 -9.1 -3.66178 | opp_overlap 301699 301712, overlap 301699 AACGAGCATCTAAAA GAGCG GCT CGCTC TTTAGAATTGGAAAG TERM 359 301758 - 301743 - GR 70 -5.4 -4.46835 | overlap 301739 AGAATTGGAAAGAAA CCCTGT TTCC ACAAGG ACCGCAGGCATGGTT murE 303729 - 302278 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase pbp3 305995 - 304052 - | penicillin-binding protein TERM 360 304675 - 304685 + g 74 -4.6 -4.83169 | overlap 304684 TCGATAAAGACCATT CGGG AGA TCCG TTTTTATGGAAACGT TERM 361 304897 - 304911 + g 70 -2.8 -5.06451 | ATCGATTACTGACAA TGTCTT TTA GAGGCA TTTTTTGCCGTCCTG TERM 362 305342 - 305369 + g 100 -12.8 -4.21936 | opp_overlap 305334 305343 305349, overlap 305343 GTCTAAACGGTTTAA AGGAGAACGCAA CAAC TTGCGTTCTCCA TTTTCCCCTTCTAAC TERM 363 305368 - 305343 - G 100 -16.3 -3.5936 | opp_overlap 305343 305342, overlap 305334 305349 TCTAAACGGTTTAAA GGAGAACGCAA CAAC TTGCGTTCTCC ATTTTCCCCTTCTAA TERM 364 305343 - 305368 + g 100 -16.3 -3.1268 | opp_overlap 305334 305343 305349, overlap 305342 TCTAAACGGTTTAAA GGAGAACGCAA CAAC TTGCGTTCTCC ATTTTCCCCTTCTAA CTA_0293 306269 - 305982 - | hypothetical protein mraW 307171 - 306269 - | S-adenosyl-methyltransferase MraW CTA_0295 307449 - 308015 + | hypothetical protein CTA_0296 308022 - 308441 + | TPR repeat-containing protein TERM 365 308497 - 308513 + F 78 -3.1 -5.4182 | GAGATTCTCCTTCTA TTATTGA GTA TTAATAA TTTTTGTTTCTGATT TERM 366 309034 - 309048 + G 72 -7.2 -3.91084 | overlap 309019 TAAGCTTAATGGAGC TTATCG TTT CGATAA TTTCATTGAAGGTCC dnaA 308684 - 310051 + | chromosomal replication initiation protein CTA_0298 310090 - 310674 + | hypothetical protein CTA_0299 311305 - 310646 - | hypothetical protein TERM 367 311648 - 311664 + G 75 -5.2 -4.89852 | TATAGGATCCGTCCT TTTTGC TGGAT GCAAAA TTTTTCTCCCTCTCC TERM 368 311704 - 311718 + G 89 -7.2 -4.93316 | GCTATGCTGTAGGAG GAACTT GCG AAGTTC TTTTTGCTATTATTC nqrB 311307 - 312818 + | Na(+)-translocating NADH-quinone reductase subunit B TERM 369 313336 - 313350 + G 70 -7.2 -3.7732 | opp_overlap 313336 313335 313344 CGAAAAATCCAACAG CTATAG AAT CTATAG TTCTTCCTATAGAAG TERM 370 313602 - 313630 + G 90 -11.7 -3.67597 | AAAGGATCTGTATCT GCAGCATTAGGAG ACT CACCTAAAGCTGC TTCTTCCATCGACGG nqrC 312822 - 313772 + | Na(+)-translocating NADH-quinone reductase subunit C nqrD 313762 - 314403 + | Na(+)-translocating NADH-quinone reductase subunit D nqrE 314409 - 315143 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 371 315146 - 315162 + T 81 -10.1 -3.77206 | opp_overlap 315145 315146, overlap 315161 CAAGGCTTCATAAAT GGCGGTT AAT AGCCGCC TTTGCTAGGGTTCTA gcsH 315520 - 315167 - | glycine cleavage system protein H CTA_0305 317636 - 315540 - | hypothetical protein TERM 372 316882 - 316899 + g 80 -2.7 -5.56568 | CGAGCTTCTTTTAAG GAAGG CATCCCAA CCTTC TTTTTTTGCTCATCT TERM 373 316950 - 316926 - G 74 -7.9 -4.03183 | opp_overlap 316926 316928 ATCTATAAAACATAA CATTGCCTCTG TAA CAGAAGAAATG TACTTATCCCCAAAC TERM 374 317252 - 317230 - G 73 -2.7 -5.09762 | gap 1, overlap 317231 TCTGAAGAAATAAAA GGAGCATCGA ATCG CCGATAC-CC TTCGTAACTCCTCTC TERM 375 317796 - 317763 - R 81 -10.3 -3.5511 | opp_overlap 317764, overlap 317761 317768 TTTCATGGACAAAGA CCGAAGGGAGGATCT GTAC AGATCCTCCCTCCCT ATTAGAAGAGTTAAG TERM 376 317764 - 317795 + r 82 -11.6 -3.03159 | opp_overlap 317763 317761 317768 TTCATGGACAAAGAC CGAAGGGAGGATCT GTAC AGATCCTCCCTCCC TATTAGAAGAGTTAA TERM 377 317791 - 317768 - R 100 -15.4 -3.26719 | opp_overlap 317764, overlap 317763 317761 TGGACAAAGACCGAA GGGAGGATCT GTAC AGATCCTCCC TCCCTATTAGAAGAG CTA_0306 319231 - 317807 - | phospholipase D lplA_1 319956 - 319237 - | lipoate-protein ligase A TERM 378 320830 - 320852 + G 76 -9.9 -3.29511 | gap 1, opp_overlap 320824 320828, overlap 320851 ATGTTTAAAGAATCG CGCCTCGATC CAGT GATCG-GGCG TTCTGCAGAAGTCGA clpC 320221 - 322785 + | negative regulator of genetic competence trmU 323842 - 322766 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 379 323047 - 323023 - G 84 -10.1 -3.85698 | overlap 323028 GCTCTTGTCGATAAA GTAAAGGATGA TCT TCACCCCTTAC AATGTAAACAATATT TERM 380 324381 - 324367 - g 78 -2.1 -5.54338 | overlap 324361 CAACGAAAACAAAAA CAACT AAAAG AGTCG CTTCCGTTAGATAAT TERM 381 325182 - 325168 - g 73 -5.8 -4.42619 | opp_overlap 325174 GAAGATTTGACAAAA CAATAT GAT ATATTG AACGCAGCCTTTAAT CTA_0310 324073 - 325764 + | hypothetical protein TERM 382 325822 - 325788 - T 100 -13.1 -5.06735 | opp_overlap 325794, overlap 325794 CATAAATGACAAAAA GAAAAAGGAGAGC TGTTGCTGT GCTCTCCTTTTTC TCTAAATATTCCTGA TERM 383 325794 - 325816 + T 79 -6.3 -4.99638 | opp_overlap 325788 325794 TGACAAAAAGAAAAA GGAGAGC TGTTGCTGT GCTCTCC TTTTTCTCTAAATAT TERM 384 325816 - 325794 - T 100 -6.3 -5.69262 | opp_overlap 325794, overlap 325788 TGACAAAAAGAAAAA GGAGAGC TGTTGCTGT GCTCTCC TTTTTCTCTAAATAT CTA_0311 326990 - 325851 - | hypothetical protein TERM 385 326449 - 326465 + g 73 -8.7 -3.49475 | opp_overlap 326444 GAAAGAGAAGCTCGA GCAGCAG CTA TTGCTGC TTCTGTAGGACTCAA TERM 386 326513 - 326529 + g 70 -3.7 -4.77047 | overlap 326523 GAGAAGTATTTACAG GCTTTTT CTT GAGAAGC TTTCTTTCTCTTTTA TERM 387 326733 - 326716 - G 73 -3.5 -4.94168 | overlap 326718 ATACAAGAAAAGAAA TCCTTTT TCTT AAAAGAA GCCTTACATGCAGAT ptsN_1 327725 - 327048 - | nitrogen regulatory IIA protein TERM 388 327288 - 327266 - G 74 -4.8 -4.84311 | overlap 327267 TTTGAGATAAGAAAA CGGGAACAAT AAT ATCGTACCCA ACGTTAATCAAGAAG ptsN_2 328204 - 327728 - | PTS system, nitrogen regulatory IIA component dut 328643 - 328206 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 389 328677 - 328638 - G 74 -4.3 -5.00642 | opp_overlap 328640, overlap 328639 328640 CAATTTACAGAAAAA TTTCATAGAAGGCCCTC TTTTTG AAGAGCCTCCTATGATC TTTTATTCGTTATCA TERM 390 328676 - 328639 - G 70 -7.8 -3.59301 | opp_overlap 328640, overlap 328638 328640 AATTTACAGAAAAAT TTCATAGAAGGCCCTC TTTTTG AAGAGCCTCCTATGAT CTTTTATTCGTTATC TERM 391 328675 - 328640 - G 81 -11.3 -2.74496 | opp_overlap 328640, overlap 328639 328638 ATTTACAGAAAAATT TCATAGAAGGCCCTC TTTTTG AAGAGCCTCCTATGA TCTTTTATTCGTTAT accD 329606 - 328680 - | acetyl-CoA carboxylase subunit beta sodM 330298 - 329678 - | superoxide dismutase mrsA_1 332211 - 330430 - | phosphoglucomutase TERM 392 330873 - 330861 - G 74 -7.7 -3.91858 | opp_overlap 330860 CATAGACCTCATAAA GCTCT AAC AGAGC ATCTCGTAACGTACA dcrA 332830 - 332363 - | hypothetical protein TERM 393 333597 - 333581 - g 75 -5.1 -4.8487 | GGATCAAAAAAAGAA GCAGAAA AAC TTGCTGC TAAACAGGCGTTATC rnc 332939 - 333634 + | ribonuclease III TERM 394 334485 - 334471 - g 80 -2.8 -5.55769 | overlap 334472 TTCTACAAGAAAAAA TTGTAG AAA CTACAG GCTCTACCATTATCC radA 333618 - 334982 + | DNA repair protein RadA hemC 334960 - 335685 + | porphobilinogen deaminase CTA_0322 336078 - 336425 + | hypothetical protein TERM 395 336458 - 336434 - T 100 -14.4 -4.75776 | opp_overlap 336434 AATCTAAGCCAAAAA GCCCTTTCCT TTATG AGGAAAGGGC TTTTTATTTCTTTAT TERM 396 336434 - 336458 + T 100 -15.1 -5.56573 | opp_overlap 336434 AATCTAAGCCAAAAA GCCCTTTCCTT TAT GAGGAAAGGGC TTTTTATTTCTTTAT pknD 339282 - 336478 - | serine/threonine-protein kinase valS 342116 - 339297 - | valyl-tRNA synthetase CTA_0325 342758 - 342243 - | hypothetical protein atpK 343104 - 342679 - | V-type ATP synthase subunit K TERM 397 343119 - 343131 + r 75 -2 -5.40072 | TATATTTCCTCTCAC TAGA CATTT TCTA TTTTTTTCAAAAAAA atpI 345116 - 343167 - | V-type ATP synthase subunit I TERM 398 343824 - 343834 + g 71 -3.2 -4.95302 | overlap 343817 343815 TTGGGCTAGAAGAAA CTCT TTA GGAG TTTTCTTCTCTTTAA TERM 399 344208 - 344176 - G 90 -4.2 -5.62552 | gap 1, opp_overlap 344184, overlap 344178 344184 AAAAAAACGAAAAAA GAGAAAAAGACCCAT AATG AAGGGTCTTTATC-C GTTGATGCAGGAGTA TERM 400 344207 - 344178 - G 79 -7.9 -4.37346 | opp_overlap 344184, overlap 344176 344184 AAAAACGAAAAAAGA GAAAAAGACCCAT AATG AAGGGTCTTTATC CGTTGATGCAGGAGT TERM 401 344201 - 344184 - G 87 -5.5 -5.41787 | opp_overlap 344184, overlap 344178 344176 GAAAAAAGAGAAAAA GACCCAT AATG AAGGGTC TTTATCCGTTGATGC atpD 345733 - 345122 - | V-type ATP synthase subunit D atpB 347034 - 345718 - | V-type ATP synthase subunit B atpA 348812 - 347037 - | V-type ATP synthase subunit A TERM 402 347349 - 347325 - G 86 -8 -4.62069 | opp_overlap 347324 347327 CTCTGATTTCAAAAA GATTTCCATG TCTTC CATAGAAATC CCTTCTTCCCCTACG CTA_0331 349606 - 348806 - | hypothetical protein TERM 403 349286 - 349296 + g 74 -6.8 -4.36914 | opp_overlap 349285 GAAATGAGTTAAACG CTCC TGA GGAG TTTTATAGCGCAACA TERM 404 349426 - 349412 - G 82 -5.7 -5.07652 | GGTCCCAAAAGAAAA GGGAA TCGAT TTCCC TGCCCAGAAAAAAGC TERM 405 349706 - 349691 - R 100 -6.1 -5.72616 | opp_overlap 349690 ACGCATACAAAAAAA CTCCG AGTTTG CGGAG CTTCCATCGTCAACG atpE 350399 - 349773 - | V-type ATP synthase subunit E CTA_0333 350508 - 351218 + | hypothetical protein CTA_0334 351597 - 351226 - | ferredoxin tal 352625 - 351642 - | transaldolase B TERM 406 352354 - 352325 - G 100 -9.3 -4.72007 | CTGTATTAAAAGAAA GCCGGGCATCAAT TTCT AATGATACCCGAC CAGGAACATGCTTTA TERM 407 352707 - 352686 - R 74 -9.5 -3.12378 | gap 1, opp_overlap 352684 352684 352687 AACGATACTATTCAA GGGGGTTATG ACT CAT-ACCCCC TCTCTTTCTCTAGTT TERM 408 352687 - 352707 + r 79 -9.7 -3.39968 | opp_overlap 352686, overlap 352684 352684 ACGATACTATTCAAG GGGGTTATG ACT CATACCCCC TCTCTTTCTCTAGTT rpoC 356927 - 352737 - | DNA-directed RNA polymerase subunit beta' TERM 409 355903 - 355914 + g 78 -5.8 -4.81249 | CCTAACAAATTCTGT CGGA AACG TCCG TTTTTCCCTTTCAAC TERM 410 356670 - 356642 - G 100 -13.9 -3.89346 | opp_overlap 356626 GTCGCACTTTAGAAA GTGTGACCTCTAC TCC GCAGCGGTCACAC ACAATTCCTTTATGT rpoB 360710 - 356952 - | DNA-directed RNA polymerase subunit beta TERM 411 359907 - 359921 + g 88 -10 -4.13945 | CAAAGATTGGACTCC CGCATC TAA GATGCG TTTTAGCATAGCAGT TERM 412 360653 - 360671 + g 77 -4.6 -4.92756 | CTTCGACAAGATTAG GAAGATCT AAA ATATCTTC TTTCTTTTTGATGCT TERM 413 360938 - 360907 - R 83 -3.8 -5.5112 | gap 1, opp_overlap 360916, overlap 360908 TCCATTAAGAAAAAA CCATTGC-AACAGAA ATA TTCTGTTTGCGATGC CAAACACTAAAAGTT TERM 414 360937 - 360908 - R 72 -7.3 -3.89587 | gap 1, opp_overlap 360916, overlap 360907 CCATTAAGAAAAAAC CATTGC-AACAGAA ATA TTCTGTTTGCGATG CCAAACACTAAAAGT rplL 361463 - 361071 - | 50S ribosomal protein L7/L12 rplJ 362013 - 361495 - | 50S ribosomal protein L10 rplA 362733 - 362035 - | 50S ribosomal protein L1 rplK 363181 - 362756 - | 50S ribosomal protein L11 nusG 363835 - 363287 - | transcription antitermination protein NusG secE 364087 - 363839 - | preprotein translocase subunit SecE TERM 415 364214 - 364193 - R 90 -12.3 -3.74345 | AGCTACACACCCAAA GGCAAGGCT TTTC AGCCTCGCC AACACATCACTTAAT tuf 365414 - 364230 - | elongation factor Tu infA 365983 - 365762 - | translation initiation factor IF-1 TERM 416 366301 - 366278 - H 82 -8.2 -4.35116 | opp_overlap 366296 366298, overlap 366298 TACTTCACAGTAAAA CTCCCCATTC TTCC GAATGAGAAG CTTCGCTTCTGTTTT TERM 417 366298 - 366310 + H 70 -7.7 -3.63744 | opp_overlap 366278 366298, overlap 366296 CATTCTTCCGAATGA GAAGC TTC GCTTC TGTTTTAGAAAAACA CTA_0348 366395 - 367306 + | hypothetical protein CTA_0349 367303 - 367749 + | hypothetical protein TERM 418 367787 - 367745 - T 100 -11.4 -4.56775 | opp_overlap 367755 367757, overlap 367750 367753 ATCTGGCTCGAAAAA CCTAATGAGATAGCCAATGA TTC TCATTGGCTATCTCCTCCTG CTCACAAGACTACTT TERM 419 367782 - 367750 - T 100 -16.5 -3.45031 | opp_overlap 367755 367757, overlap 367745 367753 GCTCGAAAAACCTAA TGAGATAGCCAATGA TTC TCATTGGCTATCTCC TCCTGCTCACAAGAC TERM 420 367779 - 367753 - T 100 -16.8 -2.86773 | opp_overlap 367755 367757, overlap 367750 367745 CGAAAAACCTAATGA GATAGCCAATGA TTC TCATTGGCTATC TCCTCCTGCTCACAA TERM 421 367755 - 367777 + T 93 -13.6 -2.83715 | opp_overlap 367753 367750 367745, overlap 367757 AAAAACCTAATGAGA TAGCCAATGA TTC TCATTGGCTA TCTCCTCCTGCTCAC TERM 422 367757 - 367775 + T 82 -11.8 -2.96692 | opp_overlap 367753 367750 367745, overlap 367755 AAACCTAATGAGATA GCCAATGA TTC TCATTGGC TATCTCCTCCTGCTC CTA_0350 369603 - 367801 - | hypothetical protein TERM 423 369136 - 369118 - G 79 -3.1 -5.252 | overlap 369121 TACTGTTACAAAAAA TGATGGA TTAAT TCCAACA ACCCGAATACGAGCA TERM 424 369928 - 369895 - R 100 -19.1 -5.81412 | opp_overlap 369895 TCGAGTCAAAAAAAA GCTCTTTGCTAGACC TTTA GGTCTAACAAAGAGC TTTATCACCGTTCGC TERM 425 369895 - 369928 + r 100 -16.9 -3.89614 | opp_overlap 369895 TCGAGTCAAAAAAAA GCTCTTTGCTAGACC TTTA GGTCTAACAAAGAGC TTTATCACCGTTCGC CTA_0351 370148 - 369966 - | hypothetical protein CTA_0352 370535 - 370329 - | hypothetical protein TERM 426 370397 - 370377 - G 100 -9 -4.59773 | opp_overlap 370368 370377 GCCCATGTCTAAAAA GCCCTCTG TAGAC CAGAAGGC TTGCTTTGACTTTGT trpC 371495 - 370869 - | N-(5'-phosphoribosyl)anthranilate isomerase TERM 427 372107 - 372097 - g 76 -6.8 -4.57569 | GTACTTGCTGAAAAA GCTG CTG CAGC TATCCATAGTGGAAT tpiA 371692 - 372516 + | triosephosphate isomerase xseA 372530 - 374080 + | exodeoxyribonuclease VII large subunit xseB 374064 - 374282 + | exodeoxyribonuclease VII small subunit TERM 428 374364 - 374339 - g 100 -14.8 -2.89191 | opp_overlap 374331 GGACACCGTTATACA GCGCCTTCTG GTTTTA CAGAAGGCGC TTGAGGACTGTCATT CTA_0358 374289 - 374561 + | hypothetical protein TERM 429 374914 - 374924 + G 87 -8.2 -4.53439 | TTTCTCTGGTCATGC GGGC AAT GCCC TTTCTTTAGCTTTAG dxs 374558 - 376480 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 430 376477 - 376463 - f 70 -8.6 -3.06183 | CCCATTCCTATCGAA CGCTTT TTT AAAGCG TAGCGATTGCGGTTG pykF 376577 - 378034 + | pyruvate kinase TERM 431 378494 - 378463 - g 80 -3.8 -5.31059 | gap 1, overlap 378451 ACAGTAAGGAAAAAA TCCTTTCTGAAATAG CTG CCATTCCAGAT-GGA ACTCAACTGACTTTG TERM 432 379198 - 379186 - g 76 -2.7 -5.28826 | AAATTGGAGAAAAAA TTCGA TTT TCAAA TAAGCCTGCTCGCTA TERM 433 379330 - 379340 + G 70 -5.4 -4.45807 | ACTTTCAACAAATGT CTCT TCA AGAG TTATTTATTTTCCTG TERM 434 380961 - 380973 + G 72 -7.7 -3.90045 | GGTCCATCCGCTTCC GGGAA ACA TTCCC TTGTATTTGATATTC TERM 435 381131 - 381121 - g 89 -6.8 -5.36441 | TCGCGATAGAAAAAA CGAG CGC CTCG AGAAATTCCAATCAT TERM 436 381316 - 381335 + G 73 -2.8 -5.1523 | overlap 381327 TAACGATTACTGTTC CTTTCCCT AAAG AGGAAGAG TTTTTCTCTTATACG uvrA 378057 - 383417 + | excinuclease ABC subunit A dnaX_2 383635 - 385035 + | DNA polymerase III subunits gamma and tau CTA_0363 385028 - 385318 + | hypothetical protein ptsI 387043 - 385328 - | phosphoenolpyruvate-protein phosphotransferase TERM 437 385517 - 385494 - G 73 -8.9 -3.54256 | opp_overlap 385493, overlap 385492 AGTCCTAAAAACATA GGCAGAAGA GCAGGG TCTCCTGCC ATCTCTCCACATACA ptsH 387372 - 387043 - | phosphocarrier protein HPr CTA_0366 387970 - 387509 - | hypothetical protein CTA_0368 388293 - 388027 - | putative cytoplasmic protein TERM 438 388308 - 388323 + Gr 70 -7.6 -3.57246 | overlap 388307 TTACATCGCCTATCT GCCTTA CGGA TAAGGC TATTTAGTTCCTGCT CTA_0367 388254 - 389783 + | hypothetical protein TERM 439 389827 - 389802 - TR 100 -9.8 -6.06723 | gap 1, opp_overlap 389802 TGTTCTAAAAAAAAA GCGCTCCT-GT TTATC ACTAGGAGCGC TTTTTGTTGGAAATG TERM 440 389802 - 389827 + Tr 93 -9.8 -5.07486 | gap 1, opp_overlap 389802 TGTTCTAAAAAAAAA GCGCTCCT-GT TTATC ACTAGGAGCGC TTTTTGTTGGAAATG pdhA_2 391892 - 389856 - | 2-oxoisovalerate dehydrogenase alpha subunit TERM 441 389902 - 389916 + g 79 -8.6 -4.15453 | AAGATTTTTTCTTTT TGAGGT AGC ACCTCA TTTTCCAATACCTTA TERM 442 389965 - 389939 - G 73 -10.2 -2.56177 | overlap 389942 389944 389955 ATACCTTAGAGTAAG GAACAGGAGCAT GCA ACGCTCCTATCC GCTTGATAGGAGCGT TERM 443 389962 - 389942 - G 71 -8.3 -3.43071 | overlap 389939 389944 389955 CCTTAGAGTAAGGAA CAGGAGCAT GCA ACGCTCCTA TCCGCTTGATAGGAG TERM 444 389960 - 389944 - G 71 -8.7 -3.28487 | overlap 389942 389939 389955 TTAGAGTAAGGAACA GGAGCAT GCA ACGCTCC TATCCGCTTGATAGG TERM 445 389979 - 389955 - G 100 -14.4 -3.11459 | overlap 389944 389942 389939 AACAGGAGCATGCAA CGCTCCTATC CGCTT GATAGGAGCG TCAAGATATCTGTAA dnaJ 393105 - 391927 - | hypothetical protein TERM 446 391960 - 391990 + g 85 -9.2 -4.16251 | AAAAAAACCTTTGAT TTTGTCTAAGAAAC TCC GTTTCTTAGGGAAA TTTTCAGCCTTCTCT TERM 447 393033 - 393045 + g 80 -6.3 -4.86861 | GGTACTTTACAGCGA GCTTA CGG TAAGC TTTCTTTATTTCTTC rpsU 393310 - 393134 - | 30S ribosomal protein S21 CTA_0372 394139 - 393507 - | O-sialoglycoprotein endopeptidase TERM 448 394110 - 394098 - G 73 -5.5 -4.65838 | GACATAGGCCAAAAA CGGCT GAG AACCG GAAGTGTCTACAATA TERM 449 396267 - 396257 - g 78 -4 -5.16206 | overlap 396251 AAACCAAGAGAAAAA TCTT TCC AAGA AGTCGCGGTTTACAA lon 394449 - 396908 + | ATP-dependent protease La TERM 450 396913 - 396942 + F 86 -11.5 -3.78442 | opp_overlap 396911 396910, overlap 396914 396936 396936 CTGGGGTTTAAATCG CGTTCTCTGAGCT GTAA GGCTCAGAGAACC TTCTCTCTTATTCTC TERM 451 396914 - 396941 + F 100 -15 -2.8598 | opp_overlap 396911 396910, overlap 396913 396936 396936 TGGGGTTTAAATCGC GTTCTCTGAGCT GTAA GGCTCAGAGAAC CTTCTCTCTTATTCT TERM 452 397220 - 397235 + G 70 -5.4 -4.5493 | TTAATCTCTTTAGCC GTAGGT TCCT GCCTAC TTGTTTTGTTTCCAT CTA_0374 397010 - 397375 + | hypothetical protein TERM 453 397660 - 397638 - f 82 -9.2 -4.16943 | CCCTACATTCCAAAA CCTCTTACCT TGC AAGCAAGAGG AAGTCGCTTGTTAGG elaC 397725 - 398639 + | ribonuclease Z TERM 454 399286 - 399274 - g 95 -7.7 -5.22039 | GGGAAAGGGAAAAAA GAACG AAT CGTTC CTATGACAAAGGTAG xerC 398701 - 399648 + | site-specific tyrosine recombinase XerC yjjK 399702 - 401288 + | ABC transporter ATP-binding protein maf 401324 - 401914 + | Maf-like protein TERM 455 402363 - 402376 + G 73 -5.3 -4.73973 | opp_overlap 402363 TATGAAAAATAGCAA GGTAA GTGA TTACC TTTATTCTTTTATCT TERM 456 403574 - 403554 - g 77 -4.7 -4.92783 | opp_overlap 403556 403559, overlap 403556 AACCCATTACAAAAA TATCCCGAT CTT ATCAGGATT GTTAATGAGAATAGT TERM 457 403572 - 403556 - g 73 -7.3 -4.08042 | opp_overlap 403556 403559, overlap 403554 CCCATTACAAAAATA TCCCGAT CTT ATCAGGA TTGTTAATGAGAATA CTA_0379 401896 - 403596 + | hypothetical protein TERM 458 403833 - 403849 + G 73 -8.7 -3.45033 | opp_overlap 403832 403833, overlap 403835 TTGTGGGATCAAAAT CGTTGCT CAT GGCAACG TTATGGTCAATTATC TERM 459 404665 - 404647 - g 77 -8.2 -4.00411 | opp_overlap 404647 404650, overlap 404650 CAAAATGTTAAACAA GAATTGCC TCA AGCAATTC TTCATCACCGACCAG CTA_0380 403603 - 405696 + | hypothetical protein TERM 460 405706 - 405732 + F 100 -8.1 -6.41881 | opp_overlap 405706 GGATAACAAAAAAAA CCAAACTAGTT TGTCC AACCAGTTTGG TTTTTTTTTCTTATC TERM 461 405732 - 405706 - f 100 -10.3 -6.17268 | opp_overlap 405706 GGATAACAAAAAAAA CCAAACTAGTT TGTCC AACCAGTTTGG TTTTTTTTTCTTATC CTA_0381 405860 - 406165 + | hypothetical protein def 406780 - 406235 - | peptide deformylase ksgA 407888 - 407055 - | dimethyladenosine transferase CTA_0384 408965 - 407904 - | hypothetical protein yyaL 411384 - 409270 - | hypothetical protein TERM 462 410424 - 410408 - G 88 -6.6 -5.24799 | opp_overlap 410410 TCAGAAAGATAAAAA GATCCT GATTT AGGATC CGTTAGCTCTTTAAT CTA_0388 411989 - 411702 - | putative cytoplasmic protein TERM 463 411729 - 411743 + gH 77 -3.5 -5.15634 | TTTTACCTTTATTAG GCGTG GTAAA TACGC TTTTTTGGTAAAATG TERM 464 411759 - 411796 + gH 79 -10.7 -3.16055 | gap 1, opp_overlap 411758 411761, overlap 411762 411772 411795 TTTTTTGGTAAAATG GAG-GGGTTTGGAGGAAG AGA CTTCTTCTAATCCCTCTC TTCCTAAAGAATTTA TERM 465 411762 - 411792 + gH 80 -11.2 -3.12895 | opp_overlap 411761 411758, overlap 411759 411772 TTTGGTAAAATGGAG GGGTTTGGAGGAAG AGA CTTCTTCTAATCCC TCTCTTCCTAAAGAA CTA_0387 411841 - 412173 + | hypothetical protein TERM 466 412559 - 412547 - g 71 -9.1 -3.40403 | opp_overlap 412544 412547 GTCTCCTCACTAGAA CGCCA GTC TGGCG TCATCTTTATAGAAG CTA_0389 412199 - 412735 + | hypothetical protein bioY 413385 - 412795 - | hypothetical protein CTA_0391 413694 - 413440 - | hypothetical protein TERM 467 413538 - 413505 - GR 79 -3.1 -5.35354 | gap 1, overlap 413508 413509 TACAGAAGGAAAAAA GCAGCCGCACCATAAT ATA AATATGGCGCGAA-GC TTTCTGGAAACGATC CTA_0392 414263 - 413637 - | hypothetical protein TERM 468 414339 - 414304 - R 100 -12.1 -5.08178 | ATATAGACACAAAAA CCCTTTATTACCTCT GTAAAA AGACGTAATAAAGGG CACAGTTCATCTCAT TERM 469 414386 - 414362 - R 82 -10.8 -3.33162 | CATCTCATTTTAGAA GACAGATAGG CTTTT CCTATCTGCC AAAATCAAACTTATT dapA 415285 - 414425 - | dihydrodipicolinate synthase TERM 470 414799 - 414784 - G 74 -4.7 -4.7497 | overlap 414792 CTGACTCAGCAAAAA GCTCA CAAGCC TGAGC AGACCCTCCAGAATC lysC 416590 - 415295 - | aspartate kinase TERM 471 415439 - 415396 - G 73 -5.4 -4.67608 | gap 1, overlap 415397 GACTCCAACATAAAA CTGGAGTTCTGTGTAGAGCCT CAA AGACTCTAGACATA-CTCCAT GAAGCTAGCTTCGCT TERM 472 415438 - 415397 - G 71 -8.9 -3.39842 | gap 1, overlap 415396 ACTCCAACATAAAAC TGGAGTTCTGTGTAGAGCCT CAA AGACTCTAGACATA-CTCCA TGAAGCTAGCTTCGC TERM 473 415650 - 415627 - G 86 -9 -4.34267 | gap 1, opp_overlap 415626 415622, overlap 415629 415647 GTACACAACCCAAAA CATCCTCTAGT CTC ACTAGAGGA-G AATTGTATTCTACAA TERM 474 415649 - 415629 - G 100 -12.7 -3.76769 | opp_overlap 415626 415622, overlap 415627 415647 ACACAACCCAAAACA TCCTCTAGT CTC ACTAGAGGA GAATTGTATTCTACA asd 417587 - 416583 - | aspartate-semialdehyde dehydrogenase dapB 418358 - 417597 - | dihydrodipicolinate reductase TERM 475 417991 - 417968 - G 75 -5.2 -4.83593 | opp_overlap 417970, overlap 417958 417970 AAGAAGTACTAAAAA GTTTTGCAGC AAAA GCTGCTAATC GCTTTTGTACATACG CTA_0397 420262 - 418535 - | hypothetical protein TERM 476 419250 - 419234 - G 83 -9.5 -3.99374 | TGCTAGCAATAATAA TCCTGAT AAA ATCAGGA TCCGCTGTTGTTTCT TERM 477 419688 - 419704 + g 78 -2.2 -5.47218 | opp_overlap 419688 TCTTCTGGAGTAAGA GCTTCA CCCGA TGCAGC TTTTTTTGACTGGAA TERM 478 420020 - 419997 - G 73 -5.3 -4.60924 | GAAATTCCTGAAAAA GCAATCGCT AAAACA ATCGATTGC GGAACTCCAGGAGCT TERM 479 421505 - 421486 - gH 80 -4.9 -5.10029 | overlap 421487 ATGAATTGCAAAAAA TGGGTGG TTCTGT CCACCCT ACTCGTGACGGTCTA TERM 480 421504 - 421487 - gH 73 -8.4 -3.64933 | overlap 421486 TGAATTGCAAAAAAT GGGTGG TTCTGT CCACCC TACTCGTGACGGTCT aroA 420432 - 421754 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroL 421696 - 422250 + | shikimate kinase TERM 481 422923 - 422965 + G 84 -10.7 -3.59979 | TGGAAAGCTTCCAGC TCTTTTAGCTGCAGCCATG ATGAG CATCCCTGCGGCTAAAGGA TTTGAAATAGGAGCC aroC 422243 - 423316 + | chorismate synthase TERM 482 423940 - 423925 - g 80 -2.6 -5.41746 | gap 1, opp_overlap 423926 423928, overlap 423928 AATGCTTTAAAAAAA GAAGACA AGC TGTCT-C TTCTTATCAAAAAGA TERM 483 423938 - 423928 - g 75 -5.4 -4.79949 | opp_overlap 423928 423926, overlap 423925 GCTTTAAAAAAAGAA GACA AGC TGTC TCTTCTTATCAAAAA aroB 423313 - 424434 + | 3-dehydroquinate synthase aroDE 424415 - 425851 + | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein TERM 484 426546 - 426528 - g 95 -3.1 -5.95539 | opp_overlap 426530, overlap 426530 CTGTAAACAAAAAAA CATCCCT TATCT AGGGATT GTCTATACTGCCTCT TERM 485 426544 - 426530 - g 75 -5.7 -4.61687 | opp_overlap 426530, overlap 426528 GTAAACAAAAAAACA TCCCT TATCT AGGGA TTGTCTATACTGCCT CTA_0403 425893 - 426678 + | hypothetical protein TERM 486 427422 - 427449 + G 70 -9.3 -2.89564 | gap 1, opp_overlap 427420 427419 TTCCCAAATGAACGG GTGAGT-CTGAC AATTG GTCAGTACTCAC TCTATGCGATAGACG CTA_0404 426819 - 428147 + | hypothetical protein TERM 487 428355 - 428343 - g 70 -2.7 -4.94972 | TATTACAAGCAAAAA TCGAA AAC TTCAA TATCGTCCCCTACAC CTA_0405 428216 - 428803 + | hypothetical protein TERM 488 428974 - 428987 + G 74 -6.7 -4.25873 | GTTAGCGTGGATGCT TTCCG GAAT CGGAA TATTTTTTATAGCAA arcD_3 428819 - 429226 + | arginine/ornithine antiporter arcD_2 429235 - 429843 + | arginine/ornithine antiporter TERM 489 430177 - 430160 - g 73 -7.1 -4.17417 | opp_overlap 430163, overlap 430163 430171 GGAATCAGACATAAA CAAGAAA AAAC TTTCTTG AATCGTAAAGAAATC arcD_1 430061 - 430267 + | arginine/ornithine antiporter TERM 490 430315 - 430345 + F 100 -12.8 -4.40333 | opp_overlap 430314 430315 TTATCTTTTCAAAAG GAACTGGTTCTTTT TCA AAGAGAATCAGTTC TTTCTATTCTTTAAA TERM 491 430963 - 430978 + G 70 -5.4 -4.47328 | overlap 430964 GCTGATCGATGACAT TTCAGC AATC GCTGAG TTTTATGATCACATT CTA_0409 430439 - 431497 + | D-amino acid oxidase family protein TERM 492 431498 - 431530 + T 79 -4.8 -5.26875 | overlap 431485 431499 431500 GAGGGAGCAGCCTAA CTCTCCCCTCTCTT CTTAA AAAAGAGGGGAGCC TTTTTTCCTTACAAA TERM 493 431499 - 431529 + T 75 -8.3 -3.75402 | overlap 431485 431498 431500 AGGGAGCAGCCTAAC TCTCCCCTCTCTT CTTAA AAAAGAGGGGAGC CTTTTTTCCTTACAA TERM 494 431500 - 431528 + T 81 -11.8 -2.84518 | overlap 431485 431499 431498 GGGAGCAGCCTAACT CTCCCCTCTCTT CTTAA AAAAGAGGGGAG CCTTTTTTCCTTACA mdhC 432519 - 431539 - | malate dehydrogenase TERM 495 431624 - 431608 - G 74 -7.9 -3.91897 | opp_overlap 431608 431612, overlap 431609 431612 TTTCCCACGGATAAA GGCATCC CAA GGAAGCC TTGGAATCACTTCAT TERM 496 432060 - 432019 - G 76 -9.7 -3.32844 | gap 1, opp_overlap 432016 TGCTCTATGCGATAA CATGCTATGCATACGATT CTGGTCC AATCGTA-GCATCGCATG AAAGTTCTTTCTCAA TERM 497 432635 - 432617 - R 72 -6 -4.46212 | opp_overlap 432616 GTTTGGATGATAAAA GAATCAAG TAC CTAGATTC CTTAGTAAAAGCTTT TERM 498 432688 - 432663 - R 100 -13.5 -5.75342 | opp_overlap 432646 432660, overlap 432646 TTTTGGCAAAAAAAA GCTCATCTATT TTTC AATAGATGAGC CGACTTTAACTGAAT ltuA 432850 - 432710 - | late transcription unit A protein pgi 434542 - 432965 - | glucose-6-phosphate isomerase TERM 499 434570 - 434584 + r 74 -5 -4.94972 | GAGGAAATGTGATAC GAGAGA CCT TCTTTC TTTTTACTTGTACTA hlfX 435998 - 434655 - | GTP-binding protein TERM 500 435546 - 435535 - G 73 -7.2 -4.20367 | CGTGGTAATAAATAA CGCG CTTG CGCG AGCTCTACCTGTAAT phnP 436811 - 436011 - | metal-dependent hydrolase TERM 501 436643 - 436659 + g 77 -3.7 -5.09895 | TTCTAAGATCTGGAC CTGTATC AAT GATAAAG TTTTTTCCCTGACTC TERM 502 436773 - 436740 - G 86 -10.4 -3.87364 | gap 1, opp_overlap 436749, overlap 436741 CTCACAAGAACAGAA GGGCACAGG-GATTC CTTCC GAATCTCCTGTGCCT AAAAAAACAATCTTC TERM 503 436772 - 436741 - G 100 -13.9 -2.91696 | gap 1, opp_overlap 436749, overlap 436740 TCACAAGAACAGAAG GGCACAGG-GATTC CTTCC GAATCTCCTGTGCC TAAAAAAACAATCTT TERM 504 436796 - 436784 - G 80 -6.3 -4.79949 | opp_overlap 436784 TGCCTAAAAAAACAA TCTTC CCC GAAGA AGATGTTTCTTCCAT artJ 437613 - 436840 - | arginine-binding protein aroG 438517 - 437681 - | 3-deoxy-7-phosphoheptulonate synthase TERM 505 438643 - 438615 - R 100 -14.7 -5.63103 | opp_overlap 438615 TTTCAATGAAAAAAA CGCCCTCTTCTCT TGA AGAGAAGAGAACG TTTAATGATGCTATT TERM 506 438615 - 438643 + r 83 -10.3 -3.81689 | opp_overlap 438615 TTTCAATGAAAAAAA CGCCCTCTTCTCT TGA AGAGAAGAGAACG TTTAATGATGCTATT CTA_0417 438845 - 438654 - | hypothetical protein TERM 507 438940 - 438911 - H 75 -2.3 -5.42198 | overlap 438931 TCTTAAAAAATAAAA TTAAATTCAAATG AAAA CAATTTAATTTAA AACCATTAAATTCAT TERM 508 438990 - 438966 - H 70 -5.9 -4.21607 | opp_overlap 438973, overlap 438951 TTCATTGAAGACAAA GAAAAACTTTT GTT AAAATTTTTTC GCTATACCGCAAAAT TERM 509 438973 - 438983 + H 70 -2.6 -5.1287 | opp_overlap 438966 AAGACAAAGAAAAAC TTTT GTT AAAA TTTTTTCGCTATACC CTA_0418 439004 - 439759 + | hypothetical protein CTA_0419 441389 - 439770 - | hypothetical protein TERM 510 439992 - 439981 - G 71 -3 -5.00616 | overlap 439954 TCGCGTTGCAAAAAA GAAA GAGC TTTC TCTAAGGCAAACGCA ycfF 441739 - 441404 - | hit family protein CTA_0421 442650 - 441736 - | MYG1 protein TERM 511 444796 - 444782 - g 75 -2.1 -5.28942 | gap 1 TACTGGAAAGAAAAA GT-GGC CCAC GCCTAC GAGATCAACCTCAAA CTA_0422 442892 - 444967 + | hypothetical protein CTA_0423 445283 - 444981 - | hypothetical protein TERM 512 446203 - 446214 + G 78 -4.4 -5.24531 | CCAGAAGCTTGCATG GTCA ACTC TGAC TTTTTTGTCGCCGCT TERM 513 446348 - 446378 + G 70 -5.4 -4.42238 | AAAAACGTTATAATC GAAGCGATGAAGCC GTC GATTTCTTTGCTTC TTTTCGTTACACTCC CTA_0424 445510 - 446736 + | hypothetical protein TERM 514 446772 - 446786 + F 83 -8.6 -4.20368 | opp_overlap 446774 AAATTACGCTGGACA GATGAG AGT CTCATC TTTATATTACCGTCC TERM 515 447851 - 447867 + G 73 -3.7 -4.93595 | opp_overlap 447851 447853, overlap 447853 ACCCACTCAAGCGAA CATCTCT GAT AGAGATC TTTTTGACTTTTTCT aspC 446844 - 448028 + | L,L-diaminopimelate aminotransferase CTA_0426 448036 - 449043 + | ABC transporter substrate-binding protein yprS 450182 - 449049 - | hypothetical protein TERM 516 450808 - 450792 - g 70 -7.3 -3.84825 | TCCACCTATACCAAA TCGGAAC CAA ATTCCGA GATGAAATCCGACCT TERM 517 451175 - 451186 + G 74 -4.4 -5.00884 | opp_overlap 451175 ATTCGAACAATTGAA GACT TAGA AGTC TTTTTTAACACCCCT TERM 518 452102 - 452080 - g 100 -10 -4.56597 | TTGGTGCTCTAAAAA TCTTCCTTGT CAT ACAAGAAAGA TCCCCCCACTCCAAG proS 450383 - 452128 + | prolyl-tRNA synthetase hrcA 452197 - 453375 + | heat-inducible transcription repressor grpE 453372 - 453944 + | HSP-70 cofactor dnaK 453970 - 455952 + | molecular chaperone DnaK TERM 519 455973 - 456008 + F 100 -6.8 -5.75945 | opp_overlap 455980, overlap 455974 455975 TTTATTTATCTTCCT TAAGCAAGAGCCTCTT GAAA AAGGGGCTCTTGCAAC TTTTTTTTAAAAAAT TERM 520 455974 - 456007 + F 85 -10.3 -4.04482 | opp_overlap 455980, overlap 455973 455975 TTATTTATCTTCCTT AAGCAAGAGCCTCTT GAAA AAGGGGCTCTTGCAA CTTTTTTTTAAAAAA TERM 521 455975 - 456006 + F 95 -13.8 -3.01966 | opp_overlap 455980, overlap 455974 455973 TATTTATCTTCCTTA AGCAAGAGCCTCTT GAAA AAGGGGCTCTTGCA ACTTTTTTTTAAAAA TERM 522 456001 - 455980 - f 72 -8.7 -3.33815 | opp_overlap 455975 455974 455973 ATCTTCCTTAAGCAA GAGCCTCTT GAAA AAGGGGCTC TTGCAACTTTTTTTT TERM 523 456288 - 456272 - g 77 -3.8 -5.21459 | AAAAACAAAAAGAAA TTTCTA AAAAA TAGAAA GCAAGTTCTGGTTCC vacB 456245 - 458329 + | exoribonuclease II CTA_0433 458585 - 459349 + | hypothetical protein TERM 524 459377 - 459388 + T 74 -5.8 -4.57073 | opp_overlap 459375 459384 459385 AAGAGTAAGGCAACC GCTG AAAC CAGC TTTTTAAAAAAGATG TERM 525 459550 - 459532 - T 74 -6.1 -4.61633 | overlap 459549 AGACAGGCTGAAAAA TCTTACT TTAGG AGTAAGA GCTGCTAGGGAGACC TERM 526 459551 - 459573 + T 70 -8.5 -3.29263 | gap 1, opp_overlap 459549 459551 459552, overlap 459551 ACTTTAGGAGTAAGA G-CTGCTAGG GAGA CCTAGCAGAC TTGTAAACCCCATCT TERM 527 459572 - 459551 - T 70 -8.7 -3.17229 | opp_overlap 459551 459551, overlap 459549 459552 ACTTTAGGAGTAAGA GCTGCTAGG GAGA CCTAGCAGA CTTGTAAACCCCATC TERM 528 459571 - 459552 - T 85 -12.2 -2.50016 | opp_overlap 459551 459551, overlap 459551 459549 CTTTAGGAGTAAGAG CTGCTAGG GAGA CCTAGCAG ACTTGTAAACCCCAT TERM 529 459625 - 459604 - T 73 -3.8 -5.1485 | opp_overlap 459604 GAAGCAAGAGAAAAA GTTATTTG TTTCTG CAAACAAC CTTTCTAACGAAAGG TERM 530 459640 - 459625 - T 74 -7.6 -3.90744 | TGTTTCTGCAAACAA CCTTTC TAAC GAAAGG CACAGGCTTTTTCAT TERM 531 459752 - 459763 + T 100 -5.8 -5.89921 | overlap 459749 GAATCCGGCTTACTC GCTC TTCC GAGC TTTTTTTATTATAAT yrbH 460758 - 459772 - | carbohydrate isomerase KpsF/GutQ family protein sucB_2 461956 - 460790 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 532 462190 - 462169 - R 93 -10.9 -4.91429 | opp_overlap 462173 AAACCTTAAAGAAAA CGAAGAGAG AAAA CCCTCTTCG TTAAAAGATCTCTAA gltT 463440 - 462202 - | proton/sodium-glutamate symport protein lpxK 464697 - 463741 - | tetraacyldisaccharide 4'-kinase TERM 533 463953 - 463971 + g 72 -7.4 -4.07568 | TTGCCAATCTTTCTG GGAAGTCT CGA AGTCTTCC TTTTGGGAAAAACGA TERM 534 464619 - 464592 - G 71 -4.8 -4.64144 | AACAACCTGCAAAAA CTATGACAACCC TAAA GGGTTGAGACAG ACTCTTCGTCCTCTT TERM 535 464711 - 464694 - G 89 -7.1 -4.99972 | overlap 464698 ATAAAACATTAAAAA TCAAGTT TCAA AACTTGA ATCATAAAAGATTTC yjfH 465522 - 464713 - | 23S rRNA methyltransferase TERM 536 464795 - 464817 + g 71 -9.2 -3.06815 | opp_overlap 464793 AGGTTTAATGAATCT GCTTTCCCTA ACA TAGGTAAAGC TATGTTACAAAAACT CTA_0439 466337 - 465510 - | N6-adenine-specific DNA methylase ribC 466933 - 466334 - | riboflavin synthase subunit alpha CTA_0441 467326 - 467790 + | transcriptional regulator NrdR TERM 537 467925 - 467909 - g 73 -2.9 -5.09173 | overlap 467899 CAAGAGGTCAAAAAA CCTAATG AGG CAACAGG CTATTCTCAGCACCA TERM 538 468173 - 468149 - g 75 -2.2 -5.25772 | AAATCACAAGAAAAA TTCGAAAAAG GCCTT CTTTCTGGAA ACTAGTTACAATGCC dksA 467804 - 468178 + | dnaK suppressor protein lspA 468184 - 468687 + | lipoprotein signal peptidase CTA_0444 468789 - 470150 + | Na(+)-linked D-alanine glycine permease TERM 539 471057 - 471090 + G 71 -8.9 -3.30771 | opp_overlap 471078 TGAAAAGCTCTCAAC CTCGAGTCTTTGAAG AAAT CATCAAAGTCTTGAG TTCTGGGGAGTCTAC pcnB_1 470366 - 471643 + | polyA polymerase TERM 540 472155 - 472165 + G 73 -5.4 -4.7373 | TCGGATTGACGATCT TCTC ATT GAGA TTTTTCATCCAGTGG TERM 541 473450 - 473440 - g 70 -5.4 -4.45545 | AGAAAAACAAAAAGA CTCT TGC AGAG ATGTGTATCAAGCAA lpxB 471704 - 473527 + | lipid-A-disaccharide synthase TERM 542 475610 - 475585 - g 84 -2.6 -5.69793 | overlap 475587 475591 ATACTAAACAAAAAA TATTAAGAGC TTCTTG GCTCCCAACA GGAGAATATGTCCTT pmpA 473634 - 476561 + | polymorphic outer membrane protein TERM 543 476609 - 476642 + F 100 -19.9 -4.6575 | opp_overlap 476614 CTCTGTATCTTCCTA GTAAATTAGGCAAGG AATA CCTTGCCTAATTTAC TTTTCTGATTTATCT TERM 544 476637 - 476614 - f 100 -14 -3.72893 | opp_overlap 476609 TATCTTCCTAGTAAA TTAGGCAAGG AATA CCTTGCCTAA TTTACTTTTCTGATT TERM 545 477858 - 477898 + G 100 -13.4 -3.29947 | opp_overlap 477850 477861 477885, overlap 477860 477861 AAAATCACTTTACCA AAAGCTCAAGCATCTGCA GGAAA TGCAGATGCTTGGGCCTC TTCCTCTCCTCAATC TERM 546 477860 - 477896 + G 100 -16 -3.214 | opp_overlap 477850 477861 477885, overlap 477858 477861 AATCACTTTACCAAA AGCTCAAGCATCTGCA GGAAA TGCAGATGCTTGGGCC TCTTCCTCTCCTCAA TERM 547 477861 - 477895 + G 100 -19.5 -2.52519 | opp_overlap 477861 477885, overlap 477860 477858 ATCACTTTACCAAAA GCTCAAGCATCTGCA GGAAA TGCAGATGCTTGGGC CTCTTCCTCTCCTCA TERM 548 477895 - 477861 - g 100 -17.3 -4.2717 | opp_overlap 477861 477860 477858, overlap 477885 ATCACTTTACCAAAA GCTCAAGCATCTGCA GGAAA TGCAGATGCTTGGGC CTCTTCCTCTCCTCA TERM 549 479139 - 479116 - g 84 -11 -3.63991 | opp_overlap 479115 479112 479129 CAGGAGTCGCAACAA CAGCTTCAGC ACCT GCTGCAGCTG CTGCTTCCCTACAAG TERM 550 480253 - 480243 - g 78 -4 -5.0916 | opp_overlap 480243 GGTTCAACACAAAAA GTTT ATG AAAC TTTAGATATTAATAA pmpB 476700 - 481955 + | polymorphic outer membrane protein TERM 551 481964 - 481988 + F 100 -14.3 -3.66883 | CTTCTAATTCTTTTT GGCCAGCCTCT TCA AAAGGCTGGCC TTTACGATCTCTTAA TERM 552 484645 - 484628 - g 72 -6.3 -4.27117 | GTTCTACAACAGAAA CTCCTAC TTTA ATAGGAG GAGGTGCTATCTATG TERM 553 485704 - 485684 - g 77 -8.4 -3.93695 | opp_overlap 485696 485702 CTGAGGATTCAGAAA CTGTAAAC TCTGC GTTTACAG GAACGATTCTGTTCT pmpC 482131 - 487485 + | polymorphic outer membrane protein TERM 554 487532 - 487491 - f 72 -6 -4.45117 | gap 2, opp_overlap 487502, overlap 487493 GACATTCTAAATAAA TATCCTGGAAAGGCAGCTCT CGCA AGGGCTGCC-TTCTAGGA-A TCCCTGCCTCCAGAA TERM 555 487531 - 487493 - f 84 -11.1 -3.82628 | gap 1, opp_overlap 487502, overlap 487491 CATTCTAAATAAATA TCCTGGAAAGGCAGCTCT CGCA AGGGCTGCC-TTCTAGGA ATCCCTGCCTCCAGA TERM 556 487502 - 487523 + F 89 -12.3 -3.31461 | opp_overlap 487493 487491 TAAATATCCTGGAAA GGCAGCTCT CGCA AGGGCTGCC TTCTAGGAATCCCTG TERM 557 487639 - 487599 - f 100 -6.1 -6.34616 | TCAAAACAAAAAAAA GACACACTTGCAGAGGTGA GGG CCACGCGAGCAAATGTGTC AGACGGAGAGAGAGG TERM 558 488526 - 488542 + G 82 -8.1 -4.53119 | opp_overlap 488526 ACAGTCTCAACTAGA TCTTTTG GAT CAAAAGA TTTCTTCTATTATTT yebL 488038 - 488868 + | metal transport system, metal-binding protein TERM 559 489093 - 489109 + G 80 -6.5 -4.82667 | overlap 489094 CGCCCTCTATCCATA GGTTGGG TTC CCCAACA TTTTTCCTATGATGC TERM 560 489094 - 489108 + G 78 -10 -3.48877 | overlap 489093 GCCCTCTATCCATAG GTTGGG TTC CCCAAC ATTTTTCCTATGATG CTA_0452 488865 - 489575 + | metal transport system ATP-binding protein TERM 561 489938 - 489951 + GT 84 -5.3 -5.26119 | CTCCCTTCCTTTAAC TCAGA GCTC TCTGA TTTTCTTTTTGGCAA TERM 562 489967 - 489992 + GT 70 -4.7 -4.56702 | opp_overlap 489969, overlap 489969 TTTTCTTTTTGGCAA TATCTTATGGG TCAC CCCACAAGATC TTTATTTCCTTGGGA TERM 563 489969 - 489990 + GT 72 -7.3 -3.88884 | opp_overlap 489969, overlap 489967 TTCTTTTTGGCAATA TCTTATGGG TCAC CCCACAAGA TCTTTATTTCCTTGG TERM 564 489990 - 489969 - gT 73 -9.5 -3.01712 | opp_overlap 489967 489969 TTCTTTTTGGCAATA TCTTATGGG TCAC CCCACAAGA TCTTTATTTCCTTGG obgE 491370 - 490363 - | GTPase ObgE CTA_0453 489566 - 490447 + | metal transport system permease protein TERM 565 490932 - 490949 + gT 81 -11.3 -2.84841 | opp_overlap 490929, overlap 490929 490928 CAACCAAGCGAATTT CTCCAGG TTTA CCTGGAG TAGCTTTTGTTGGAG TERM 566 491428 - 491397 - TR 100 -6.7 -6.08342 | GAACAAACAAAAAAA GCCCTATTTTTAC ACGTAG GCAAAAACAGAGC TTGAACAAACTGAAT rpmA 491711 - 491460 - | 50S ribosomal protein L27 rplU 492065 - 491742 - | 50S ribosomal protein L21 TERM 567 492347 - 492317 - H 100 -10.7 -5.60993 | TCTGTCACAAAAAAA TTTAGAGAGTTCT CCGTC AAAACTCTCTAAA CGCCATTAGCGGACA CTA_0458 492615 - 493316 + | hypothetical protein TERM 568 493423 - 493442 + F 72 -2.1 -5.2853 | opp_overlap 493425 493429, overlap 493405 493425 TTCTGTTCCTTTCAT AAGCAAC AGCAGA GTTGCTA TTTTCTTTTTAAATC CTA_0459 493486 - 493662 + | hypothetical protein CTA_0460 493679 - 493840 + | hypothetical protein TERM 569 493897 - 493951 + G 73 -5.3 -4.59773 | opp_overlap 493901 493919, overlap 493898 AATTTTTATTTCTAA C-GAACAACAAGATGTTAGCATAGATT TAC AATCTGCTC-AGCGTCTTGTTGTTCTG TTTTTGGAACTACAA TERM 570 493898 - 493949 + G 80 -9 -3.91506 | gap 1, opp_overlap 493901 493919, overlap 493897 ATTTTTATTTCTAAC GAACAACAAGATGTTAGCATAGATT TAC AATCTGCTC-AGCGTCTTGTTGTTC TGTTTTTGGAACTAC CTA_0461 493853 - 494338 + | metal-binding protein corC 494471 - 495580 + | hypothetical protein rsbV 495769 - 496119 + | anti-sigma F factor antagonist TERM 571 496739 - 496723 - g 78 -9.5 -3.68827 | GACCCATCAGGGAAA GGATCTT TTG AAGATCC CGATATCTTCACAAT CTA_0464 496297 - 498162 + | hypothetical protein CTA_0465 498175 - 498390 + | hypothetical protein CTA_0466 498359 - 499468 + | hypothetical protein CTA_0467 499441 - 500262 + | hypothetical protein ubiE 500198 - 500887 + | ubiquinone/menaquinone biosynthesis methyltransferase CTA_0469 501902 - 500913 - | hypothetical protein TERM 572 501110 - 501131 + g 83 -8.7 -4.0847 | overlap 501111 501126 501126 CTTCCAGACGCCCTC CTCCTCGCA AGTG TGCGAGGAA TTCTTCTTCTGTATC TERM 573 501111 - 501130 + g 86 -12.2 -3.03998 | overlap 501110 501126 501126 TTCCAGACGCCCTCC TCCTCGCA AGTG TGCGAGGA ATTCTTCTTCTGTAT TERM 574 501284 - 501295 + g 73 -5.8 -4.56775 | overlap 501291 TTGCCGACTGTTTAG GAGG TCGC CCTC TTTTTGGACGAGGGT dapF 502790 - 501963 - | diaminopimelate epimerase TERM 575 502573 - 502533 - GR 75 -9 -3.66356 | gap 1, overlap 502536 ATCTTCAAGTCCAAA GCACTGGGCTAC-GTGCGC CATT GCGCACCGCAACCCATTCC CGCACATAGATGCGA TERM 576 502570 - 502536 - GR 73 -9.3 -2.94412 | gap 1, overlap 502533 TTCAAGTCCAAAGCA CTGGGCTAC-GTGCGC CATT GCGCACCGCAACCCAT TCCCGCACATAGATG clpP_1 503337 - 502759 - | ATP-dependent Clp protease proteolytic subunit glyA 504842 - 503349 - | serine hydroxymethyltransferase TERM 577 504338 - 504353 + g 86 -9 -4.36411 | GGCCTAGGCATTTGT GCTGAG CCAT CTCAGC TTTTAATGCTTCGTA TERM 578 504970 - 504956 - H 70 -7.2 -3.74749 | ATGAGAAAGTCTAAA CTTTCT AGG AGAAAG AGGATTTATTTTAAC TERM 579 505015 - 505003 - H 76 -4.1 -5.24416 | TAACTATAAGAAAAA GAAAC GAT GCTTC CAAGACCATTACCAA hemD 505206 - 505877 + | uroporphyrinogen-III synthase TERM 580 505906 - 505933 + F 72 -8.6 -3.28785 | opp_overlap 505906, overlap 505902 ATTTATTTTAATGAA GATCTCTTCA AGAAGTTG TGAAGAGATC TTACCTCTTTTAGAG TERM 581 505933 - 505906 - f 72 -8.6 -3.35992 | opp_overlap 505902 505906 ATTTATTTTAATGAA GATCTCTTCA AGAAGTTG TGAAGAGATC TTACCTCTTTTAGAG ispF 505980 - 506516 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase cysJ 507565 - 506513 - | NADPH-cytochrome P450 reductase TERM 582 507545 - 507507 - G 100 -14.9 -3.63515 | gap 1, opp_overlap 507506 507511, overlap 507511 TCCGATGTGGAAGAA CAAAGCTCACGTGAATGT AAAA ACATCCAC-TGAGCTTTG AATTTAGAAAATAAA TERM 583 507541 - 507511 - G 100 -9.9 -4.45068 | gap 1, opp_overlap 507511 507506, overlap 507507 ATGTGGAAGAACAAA GCTCACGTGAATGT AAAA ACATCCAC-TGAGC TTTGAATTTAGAAAA TERM 584 507511 - 507541 + g 72 -7.7 -3.84451 | gap 1, opp_overlap 507507 507511, overlap 507506 ATGTGGAAGAACAAA GCTCACGTGAATGT AAAA ACATCCAC-TGAGC TTTGAATTTAGAAAA rpsJ 507899 - 507582 - | 30S ribosomal protein S10 TERM 585 507869 - 507880 + g 71 -3 -4.92756 | CAAAACCTTTCAAGC GAAT CCGA ATTC TTTGTTTTTGCTGCT fusA 509991 - 507907 - | elongation factor G rpsG 510506 - 510033 - | 30S ribosomal protein S7 rpsL 510927 - 510556 - | 30S ribosomal protein S12 CTA_0480 511187 - 511525 + | hypothetical protein TERM 586 511557 - 511501 - f 73 -7 -4.19177 | overlap 511517 ATTTTCCAATATAAA TTTTCTTGTCACAAAAGAAAAATAAC CCTCC GTTACCTTTCCTTTCTGAGAAAAAAA AGTTTTTTTTCAGAG TERM 587 512114 - 512103 - g 81 -4.4 -5.28778 | ACTATTGAGAAAAAA CCAA GCGC TTGG GCTTCTTCAATTGAA TERM 588 512667 - 512657 - g 70 -5.4 -4.41422 | opp_overlap 512657, overlap 512654 CCACAGACAAAATAA TGAC CAC GTCA TTCAGTTACGTCGTG TERM 589 513492 - 513482 - g 81 -4 -5.40474 | ACGTCTTGAAAAAAA CAAA AAC TTTG AGATTTTTGTCCAAC TERM 590 513543 - 513520 - g 78 -2.4 -5.46629 | AACACTTGAAAAAAA CAAACAAACA GGAT CGATCGTTTG GAAGCAACGATCTGC tsp 511683 - 513617 + | carboxy-terminal processing protease precursor TERM 591 513638 - 513662 + T 80 -10 -3.67296 | opp_overlap 513637 513636 AGCTCAATAAAATCT GGGAGGAGAA CTCTT TCCTCCTCCC TTTCCATACATCATC crpA 514197 - 513739 - | sulfur-rich protein TERM 592 514349 - 514326 - R 100 -16 -6.19302 | AGATAACAAAAAAAA GCCGCCCAGG AATC CCTGGACGGC ACCTACACATCGATA omcB 516036 - 514375 - | 60kD cysteine-rich outer membrane protein TERM 593 516109 - 516154 + r 100 -13.5 -3.36505 | opp_overlap 516115, overlap 516111 516114 ACATTTTCTTGTTAG CCGAAATAGTTAGTAAGGAAG CCAA CTTCCTTACTAACTACATCTG TTGTGGGTAGGCTCT TERM 594 516111 - 516152 + r 100 -14.7 -3.25102 | opp_overlap 516115, overlap 516109 516114 ATTTTCTTGTTAGCC GAAATAGTTAGTAAGGAAG CCAA CTTCCTTACTAACTACATC TGTTGTGGGTAGGCT TERM 595 516114 - 516149 + r 100 -15 -2.51045 | opp_overlap 516115, overlap 516111 516109 TTCTTGTTAGCCGAA ATAGTTAGTAAGGAAG CCAA CTTCCTTACTAACTAC ATCTGTTGTGGGTAG TERM 596 516148 - 516115 - R 100 -18.5 -3.59979 | opp_overlap 516114 516111 516109 TCTTGTTAGCCGAAA TAGTTAGTAAGGAAG CCAA CTTCCTTACTAACTA CATCTGTTGTGGGTA omcA 516449 - 516183 - | cysteine-rich outer membrane protein 3 precursor TERM 597 516452 - 516486 + H 79 -6.5 -4.7878 | opp_overlap 516452 CAGTTTTTTTCATAA CTTCCAGACTCCTTT CTAGA AAAGGGCTCTTGAAG TTTCTTTTATCGATA CTA_0485 516786 - 517010 + | hypothetical protein gltX 518527 - 517007 - | glutamyl-tRNA synthetase TERM 598 518578 - 518588 + r 70 -8.2 -3.31269 | opp_overlap 518578 518577 518575, overlap 518584 TTATGAAATGAACAC CCCG TCC CGGG TTCCTGTCCTATGAA TERM 599 518756 - 518729 - R 100 -14.8 -6.36459 | opp_overlap 518748, overlap 518731 TTCAACAAAAAAAAA GCCCCCCTCCGG AATT CCGGAGGAGGCC CAAGCTCTCCCCTGC TERM 600 518754 - 518731 - R 100 -16 -3.21221 | opp_overlap 518748, overlap 518729 CAACAAAAAAAAAGC CCCCCTCCGG AATT CCGGAGGAGG CCCAAGCTCTCCCCT euo 519350 - 518799 - | euo protein recJ 521509 - 519755 - | hypothetical protein TERM 601 520908 - 520925 + g 73 -3.5 -5.06585 | overlap 520915 CCTACTCCTGTAAGC TCTTTAT TTGG ATAAGGA TTTTTATCTAATTTA TERM 602 521572 - 521544 - R 100 -14 -5.75342 | gap 1 TCCTGTTAAAAAAAA GCTCCTT-CCTCC TTTA GGAGGAAAGGAGC CCCATAATCATCCCA secF 523321 - 521627 - | hypothetical protein TERM 603 522818 - 522830 + g 74 -4.8 -4.86001 | opp_overlap 522818 ATTAGAGTCAAAAAT GGCA CTGAA TGCC TTTTTATAACCTGCT secD 525828 - 523306 - | SecD TERM 604 526253 - 526224 - R 71 -6.5 -4.03885 | opp_overlap 526233 TTCTAAAAAAATCAA CAGCAAACTGTTT CTCA AAACTGCTTACTG AATAGGCGCTTCAGA CTA_0491 526580 - 526248 - | hypothetical protein uppS 527043 - 527804 + | undecaprenyl pyrophosphate synthetase cdsA 527810 - 528727 + | phosphatidate cytidylyltransferase cmk 528724 - 529374 + | cytidylate kinase plsC 529371 - 530021 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase argS 530036 - 531727 + | arginyl-tRNA synthetase TERM 605 531775 - 531732 - T 95 -14.2 -3.08073 | gap 1, overlap 531736 531738 531774 ATCACCTGTAACATA TGAATATTTAAGGGAAG-CTC TTC GAGTCTTCCCTTAAACATACA CAGATACTGAGTCTC TERM 606 531771 - 531736 - T 100 -13.6 -3.37493 | gap 1, overlap 531732 531738 CCTGTAACATATGAA TATTTAAGGGAAG-CTC TTC GAGTCTTCCCTTAAACA TACACAGATACTGAG TERM 607 531769 - 531738 - T 100 -14 -3.25475 | gap 1, overlap 531736 531732 TGTAACATATGAATA TTTAAGGGAAG-CTC TTC GAGTCTTCCCTTAAA CATACACAGATACTG murA 533099 - 531765 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 608 532779 - 532769 - G 75 -3.2 -5.20606 | AAATAGGAACAAAAA TCCC ATA AGGA CAACGACGTAACAAC TERM 609 533383 - 533402 + G 74 -7.8 -3.95183 | overlap 533398 ACTTCGGCATCAGGT GCTTCCGG ATCT CTGGGAGC TTCTTCTGTATCTAC TERM 610 534151 - 534122 - g 70 -7.1 -3.79419 | opp_overlap 534122 534131, overlap 534120 534123 GTGGCCCAGAAAATA CGAGTGGTGGTGC AGCA GCAGCAGCACTCA ATTCTCTAAGAGGCT TERM 611 534658 - 534686 + G 83 -8.9 -4.10855 | TCTGATCATACACCT TCTGCTTGGAGAC GTG GTCATCAAGTAGA TTTTGGAGGAATTTT TERM 612 535698 - 535656 - g 84 -9.8 -3.83705 | opp_overlap 535663, overlap 535685 AAAATTATCAGGAAA TACAGGAGCTGGGGATGACG ATC CAACAACCACAGCTGCTGTA GGTAATGGAGCGGAA CTA_0498 533311 - 536631 + | tarp protein TERM 613 536677 - 536648 - T 83 -10.8 -3.39384 | overlap 536646 536650 AAGCAAAGGAGAACA GACGAGCAGAAC AGATAA GTTCTGCTCGTG AATGCCTAAGCCATA TERM 614 536675 - 536650 - T 100 -13.4 -3.25207 | overlap 536648 536646 GCAAAGGAGAACAGA CGAGCAGAAC AGATAA GTTCTGCTCG TGAATGCCTAAGCCA CTA_0499 537399 - 536683 - | hypothetical protein yhhY 538087 - 537584 - | ribosomal-protein-alanine acetyltransferase prfB 539191 - 538084 - | peptide chain release factor 2 CTA_0503 539511 - 539771 + | SwiB complex protein TERM 615 539788 - 539818 + F 76 -9 -3.78633 | overlap 539791 ATAGAAATTGACTCA CGTGTTCCTCGTCT TTA AGATGAGGAACTAG TTCATTCTTTTTGTT TERM 616 539791 - 539815 + F 95 -13.7 -2.94669 | overlap 539788 GAAATTGACTCACGT GTTCCTCGTCT TTA AGATGAGGAAC TAGTTCATTCTTTTT TERM 617 540217 - 540239 + G 73 -10.6 -2.50443 | overlap 540216 ATTACGCCACCTACG TATCCCGTGA TAT TCACGGGAAA ATTAATACCATCTCA yaeI 539829 - 540818 + | metallo-phosphoesterase ispD 540808 - 541467 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 618 541499 - 541489 - g 100 -4 -5.9873 | CCATGACAAAAAAAA TTGT TTT ACAA ATCGCTTATCAAGGA truA 541476 - 542279 + | tRNA pseudouridine synthase A CTA_0507 542905 - 542231 - | HAD superfamily hydrolase CTA_0508 542998 - 543639 + | hypothetical protein CTA_0510 543933 - 544262 + | hypothetical protein TERM 619 544889 - 544877 - g 73 -2.7 -5.10064 | overlap 544871 TTGAATATACAAAAA TTCAA CCT CTGAA CCTTCGTTCTATAGA atoS 544240 - 545298 + | AtoS TERM 620 546377 - 546351 - g 80 -8.8 -4.03167 | TAAGATGAATAATAA GCCTCCAAAAAC ATT GTCTTTAGAAGC GCAAAGAAATCTTTT atoC 545341 - 546501 + | 2-component regulatory system-ATPase CTA_0514 546728 - 547264 + | hypothetical protein recO 547234 - 547965 + | DNA repair protein RecO CTA_0516 548564 - 547962 - | hypothetical protein CTA_0518 549029 - 549823 + | hypothetical protein CTA_0520 551092 - 550082 - | hypothetical protein CTA_0519 549829 - 550143 + | hypothetical protein TERM 621 550314 - 550287 - Gf 70 -5.6 -4.386 | gap 1, opp_overlap 550309, overlap 550309 TAAGCTTTCAGAAAA CAGCG-CCTCTGA TGA TCAGAAATCGCCG TTTGACGATTTTCTA pheT 551099 - 553471 + | phenylalanyl-tRNA synthetase subunit beta CTA_0522 553468 - 554433 + | hypothetical protein ada 554452 - 554964 + | o6-methylguanine-DNA methyltransferase oppC_2 556697 - 554961 - | hypothetical protein TERM 622 555163 - 555148 - G 78 -4 -5.09426 | gap 1 CCTAACCCTAAAAAA GTG-AGC CCT GCTTCAC AGCTAATCATAGCCA TERM 623 555985 - 556001 + g 79 -8 -4.36729 | opp_overlap 555985, overlap 555979 CCCCATCCTTCAAAA CCTTCC GGATA GGAAGG TTTTAACTTGTTGAT TERM 624 556001 - 555985 - G 76 -8 -4.09685 | opp_overlap 555979 555985 CCCCATCCTTCAAAA CCTTCC GGATA GGAAGG TTTTAACTTGTTGAT TERM 625 556488 - 556473 - G 76 -2.6 -5.27399 | TAAGACATTAAAAAA TAAATC GATA GACTTA GTGTAAAAACCTGGG oppB_2 558177 - 556699 - | hypothetical protein TERM 626 557458 - 557439 - G 84 -10 -3.90318 | opp_overlap 557439 TGATCACTTCAGAAA CGACCGTC TTAT GACAGTCG TTGCGTAACGTTCCA oppA_4 560249 - 558159 - | hypothetical protein TERM 627 559973 - 559954 - G 71 -5 -4.63218 | CCTTTCGGAACAAAA CCTTCCTT TAAC AACGAAGG GACCACTTTTTCAAC TERM 628 560466 - 560487 + r 90 -11.7 -4.07885 | opp_overlap 560466 TTTAAGAAAAAAAAA GAGAGTTGA AAAT TCAACTCTC TTTTAGAAAAAACTA TERM 629 560487 - 560466 - R 100 -11.7 -6.36459 | opp_overlap 560466 TTTAAGAAAAAAAAA GAGAGTTGA AAAT TCAACTCTC TTTTAGAAAAAACTA CTA_0527 560664 - 560500 - | hypothetical protein TERM 630 560594 - 560565 - G 80 -8.8 -3.97331 | opp_overlap 560565 560570, overlap 560570 AAGCTAGGGAAACAA CTAAAGAAGAAA CTTCTT TTTCTTCTTCAG TCTCATCAGCGTAAA TERM 631 560570 - 560580 + g 84 -5.4 -5.30348 | opp_overlap 560570 560565, overlap 560565 AGGGAAACAACTAAA GAAG AAA CTTC TTTTTCTTCTTCAGT CTA_0528 561588 - 560857 - | hypothetical protein CTA_0529 562403 - 561750 - | hypothetical protein TERM 632 563115 - 563126 + G 78 -2.2 -5.42131 | TCTCTATTCGCCCTT TGGC GACA GCTA TTTTTTCTGTGATTG CTA_0530 562871 - 563236 + | hypothetical protein CTA_0531 564213 - 563215 - | hypothetical protein TERM 633 563829 - 563817 - G 80 -2.7 -5.43621 | ATAAATTACAAAAAA CAAAA TAC TCTTG ATTTTGCATTACCAG hemH 565314 - 564370 - | ferrochelatase TERM 634 564849 - 564820 - G 86 -11.5 -3.35597 | overlap 564818 CTGAGCGGCTAAACA GTCTCGAATATGC TGTT GCATACACGAGAC AAACTCAGGATGCAC TERM 635 565127 - 565110 - G 77 -6.3 -4.59773 | CTGTATCTTGAAAAA TAGGAGA TCCC CCTCCTA AATAAGCGTATTGTC fliY 566121 - 565336 - | glutamine-binding protein yhhF 566739 - 566167 - | methyltransferase TERM 636 566707 - 566696 - G 74 -4.4 -4.9218 | opp_overlap 566696 GAGGGATTAGAAAAA GTCT TTAA AGAC TTCCCTTTGAATTTA CTA_0535 567470 - 566736 - | phosphohydrolase glgC 568884 - 567559 - | glucose-1-phosphate adenylyltransferase TERM 637 568500 - 568475 - G 76 -2.7 -5.30189 | gap 1, overlap 568477 568478 GACAAGATTAAAAAA TACTCTACACGA GAA TCTTGTAGA-TA AAGAAGATTTTGGCG CTA_0537 569077 - 569328 + | hypothetical protein rho 570732 - 569338 - | transcription termination factor Rho TERM 638 570583 - 570608 + g 71 -4.7 -4.70921 | CTGTAGTTTAGCAAT CTTCGTAACTG CTAC TGGTTGCGAGG TTTCTTTCTCTTCTG coaE 571337 - 570729 - | dephospho-CoA kinase polA 573931 - 571331 - | DNA polymerase I TERM 639 572973 - 572961 - G 80 -9.1 -3.92542 | TGTAGCTGCAAAGAA GGGAG ATG CTCCC CAGTATAAGCCGCAC sohB 574943 - 573948 - | protease IV TERM 640 574842 - 574817 - G 71 -3.3 -4.99645 | gap 1 AGTTGACAAACAAAA CTCCGTCTCCCG CCC CAAGA-ACAGAG GCCGATAGGACAAAA TERM 641 575072 - 575036 - R 100 -8.1 -5.27938 | opp_overlap 575041 575042, overlap 575042 ATTTTTAAATAAAAA TTAAAAGACCTGGAATA CTA TACTCCAGGTCCTTTTC TTCTCAAGACTATAA TERM 642 575041 - 575067 + r 84 -8 -4.77165 | opp_overlap 575036 575042, overlap 575042 TAAATAAAAATTAAA AGACCTGGAATA CTA TACTCCAGGTCC TTTTCTTCTCAAGAC TERM 643 575066 - 575042 - R 100 -13.7 -4.88326 | opp_overlap 575042 575041, overlap 575036 AAATAAAAATTAAAA GACCTGGAATA CTA TACTCCAGGTC CTTTTCTTCTCAAGA TERM 644 575042 - 575066 + r 85 -11.5 -3.45817 | opp_overlap 575036 575042, overlap 575041 AAATAAAAATTAAAA GACCTGGAATA CTA TACTCCAGGTC CTTTTCTTCTCAAGA CTA_0542 576704 - 575082 - | ADP,ATP carrier protein pgsA_1 577422 - 576916 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 645 577073 - 577063 - G 78 -4 -5.11937 | AACAACTGTAAAAAA CTTT CCA AAAG ACAATGCTCTGTAAT TERM 646 578702 - 578713 + G 81 -4.4 -5.26875 | GTTTTGATAGCCGGC TTCC TGTA GGAA TTTTTTCATTAGAGA dnaB_1 577936 - 579354 + | replicative DNA helicase TERM 647 579438 - 579477 + F 87 -12.2 -3.11103 | opp_overlap 579440, overlap 579450 ACACTTTGAGAAAAA AACCTATGAGGATCGGGT GCTT GCCCGATTCTCATAGGCA TTAGCTGAGTCTTTT TERM 648 579475 - 579440 - f 100 -16.3 -5.61596 | opp_overlap 579438 579450 ACTTTGAGAAAAAAA CCTATGAGGATCGGG TGCTTG CCCGATTCTCATAGG CATTAGCTGAGTCTT gidA 579649 - 581481 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA lplA_2 581471 - 582172 + | lipoate-protein ligase A TERM 649 582210 - 582180 - T 100 -17.6 -6.22802 | overlap 582182 TCCTATAAAAAAAAA CACCCCCCTCTGCA CGG TGCAGAGGGGGGCT TGCACAATCTCAAAA TERM 650 582208 - 582182 - T 100 -22.4 -4.76409 | overlap 582180 CTATAAAAAAAAACA CCCCCCTCTGCA CGG TGCAGAGGGGGG CTTGCACAATCTCAA ndk 582654 - 582229 - | nucleoside diphosphate kinase ruvA 583416 - 582814 - | Holliday junction DNA helicase motor protein TERM 651 583042 - 583055 + g 84 -3.8 -5.50499 | TTTAAGATCCACCAT CAGC TTTTCT GCTG TTTTTTTCCCTATCC TERM 652 583390 - 583373 - G 75 -8.5 -3.79995 | TCAATCACAACATAA GACTCAT TAAT ATGAGTC AAAGTGCCTTTAATA ruvC 583948 - 583436 - | Holliday junction resolvase CTA_0551 584610 - 584056 - | hypothetical protein TERM 653 584810 - 584783 - R 100 -12 -4.7373 | overlap 584784 CCATCTGAGCAAAAA CGACGAGGACCC TAAA GAGTCCTCGCCA CAGCTTTACAAGAAG TERM 654 584809 - 584784 - R 100 -13.3 -3.43756 | overlap 584783 CATCTGAGCAAAAAC GACGAGGACCC TAAA GAGTCCTCGCC ACAGCTTTACAAGAA CTA_0553 585763 - 584897 - | hypothetical protein gapA 586778 - 585774 - | glyceraldehyde-3-phosphate dehydrogenase TERM 655 586830 - 586813 - R 79 -7.1 -4.56775 | AGTGTTTTCGAAAAA TTAGCAT CACT ATGCTAA AAATTCTATAATACA rplQ 587247 - 586822 - | 50S ribosomal protein L17 rpoA 588389 - 587256 - | DNA-directed RNA polymerase subunit alpha rpsK 588808 - 588410 - | 30S ribosomal protein S11 rpsM 589198 - 588830 - | 30S ribosomal protein S13 secY 590627 - 589254 - | preprotein translocase subunit SecY rplO 591084 - 590650 - | 50S ribosomal protein L15 TERM 656 591036 - 591058 + g 72 -9.2 -3.22102 | overlap 591035 GGCCCAAGAGTTTCG TTCTTCGCTT ACG AGGCGAAGGA TCTTGTAAACACTCT rpsE 591574 - 591077 - | 30S ribosomal protein S5 rplR 591960 - 591589 - | 50S ribosomal protein L18 rplF 592533 - 591982 - | 50S ribosomal protein L6 rpsH 592962 - 592561 - | 30S ribosomal protein S8 TERM 657 592717 - 592697 - G 73 -9.1 -3.51934 | opp_overlap 592701, overlap 592701 TTTGCTGCAGAAACA TAAACCCTC CTA GAAGGTTTA GACACACGCTTAAGA TERM 658 592765 - 592795 + g 75 -3.4 -5.10656 | gap 1, opp_overlap 592774, overlap 592766 GCGATCTTCTCCGTA CCGCAAAAAGACT CTCATT AGTCTTTT-GCGA TTTTCTTCTTTTACT rplE 593522 - 592980 - | 50S ribosomal protein L5 rplX 593859 - 593524 - | 50S ribosomal protein L24 TERM 659 593840 - 593828 - G 70 -7.7 -3.66117 | overlap 593826 GCAAGCACATAAACA GTGTC ACC GACAC AAACACTACGTCTCT rplN 594240 - 593872 - | 50S ribosomal protein L14 rpsQ 594508 - 594257 - | 30S ribosomal protein S17 rpmC 594719 - 594501 - | 50S ribosomal protein L29 rplP 595137 - 594721 - | 50S ribosomal protein L16 TERM 660 594850 - 594836 - G 74 -7.8 -3.93768 | overlap 594834 594837 ACTTCGAATAAAATA CGTCCG GGA CGGACA ACAACTACCCAGTGA rpsC 595844 - 595170 - | 30S ribosomal protein S3 rplV 596189 - 595854 - | 50S ribosomal protein L22 rpsS 596474 - 596208 - | 30S ribosomal protein S19 rplB 597334 - 596480 - | 50S ribosomal protein L2 TERM 661 597185 - 597206 + g 75 -2.3 -5.27335 | ATCTCGTCCTCCAGA GCTCTTTTT GAAA AAAGAAAGC TTTTTATTTGGACGA rplW 597693 - 597358 - | 50S ribosomal protein L23 TERM 662 597582 - 597594 + g 71 -3.3 -4.91473 | overlap 597583 TGTACTTAGGATCTT TGCAG AAA CTGCC TTTCTTTTTACCTTC rplD 598377 - 597709 - | 50S ribosomal protein L4 TERM 663 598158 - 598174 + g 70 -9.4 -2.74094 | overlap 598157 598156 598160 CTGCCAAGCAACCTT GACGGG CATTC CCCGTC CCTTTTTGTCTAAAA TERM 664 598365 - 598355 - G 71 -4 -4.82901 | TCTTTTCCAGAAAAA TCAA ATT TTGA TAATAGAACCATTAG rplC 599051 - 598386 - | 50S ribosomal protein L3 TERM 665 598997 - 599019 + g 74 -4.8 -4.74706 | opp_overlap 599001 599003, overlap 598998 GATTTCCATTCTTAT CGAAGACATG CAT CATGCCTTCC TTTTTCCCTATTAGG TERM 666 598998 - 599018 + g 71 -8.3 -3.441 | opp_overlap 599001 599003, overlap 598997 ATTTCCATTCTTATC GAAGACATG CAT CATGCCTTC CTTTTTCCCTATTAG TERM 667 599435 - 599458 + r 100 -14 -5.06816 | opp_overlap 599435 TTTGTAGATAAAAAA GGCTGTTTCT TTTT AGAAACAGCC TTTTTCTTAAGAAAT TERM 668 599458 - 599435 - R 100 -14 -5.36441 | opp_overlap 599435 TTTGTAGATAAAAAA GGCTGTTTCT TTTT AGAAACAGCC TTTTTCTTAAGAAAT CTA_0578 600382 - 599486 - | hypothetical protein fmt 601498 - 600548 - | methionyl-tRNA formyltransferase TERM 669 600597 - 600610 + g 70 -5.3 -4.50058 | TTAAAAAAATCTTTT GCTTT CATC AAAGC TTTTCCTTCTGGCTG lpxA 602330 - 601488 - | UDP-N-acetylglucosamine acyltransferase fabZ 602803 - 602342 - | (3R)-hydroxymyristoyl-ACP dehydratase lpxC 603660 - 602800 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase lnt 605389 - 603761 - | apolipoprotein N-acyltransferase yciA 605935 - 605453 - | acyl-CoA hydrolase dnaQ_2 606823 - 606071 - | DNA polymerase III subunit epsilon yjeE 607300 - 606827 - | ATP/GTP hydrolase CTA_0587 607995 - 607279 - | hypothetical protein TERM 670 607945 - 607965 + g 76 -2.6 -5.34309 | overlap 607951 TTCTGGGGATTTTTG CTTTTTCA AAAAC TGGAGAAG TTTTTGTTTGATACT trxA 608717 - 609025 + | thioredoxin TERM 671 609064 - 609046 - T 100 -14.6 -4.36914 | opp_overlap 609040 CTCTTCTCTAGAAAA GGCCGAGA AAT TCTCGGCC TTAACATGATTCAAA yibK 609530 - 609075 - | rRNA methylase TERM 672 609314 - 609338 + g 72 -8 -3.7941 | gap 1, opp_overlap 609312 609313 609337 TTAGACAAAAAATGC GCTC-TTTAGG CACC CCTAAAAGAGC TTCTTCTAAAGAATC TERM 673 609462 - 609427 - G 89 -6.9 -5.27335 | overlap 609428 609432 TCTGCTAAAGAAAAA CCTAAGGGCCGAACT AATATA AGTTCAGCCCCCAAA GCCACACATGTCCTA TERM 674 609461 - 609428 - G 75 -8.2 -3.75678 | overlap 609427 609432 CTGCTAAAGAAAAAC CTAAGGGCCGAACT AATATA AGTTCAGCCCCCAA AGCCACACATGTCCT TERM 675 609457 - 609432 - G 83 -11.2 -3.54768 | overlap 609428 609427 TAAAGAAAAACCTAA GGGCCGAACT AATATA AGTTCAGCCC CCAAAGCCACACATG mip 610277 - 609546 - | peptidyl-prolyl cis-trans isomerase aspS 612162 - 610414 - | aspartyl-tRNA synthetase hisS 613429 - 612143 - | histidyl-tRNA synthetase TERM 676 613416 - 613405 - G 73 -3.6 -5.02231 | opp_overlap 613415, overlap 613399 GAAAAATATCAAAAA CGCC TTTT GGCA ATGCATTACTCATTG TERM 677 615032 - 615052 + G 71 -8.2 -3.56568 | opp_overlap 615032 TTGTCTCATAAAAAA GCAGCTGG AACGG CCAGCGGC TTTACAGGATGGTTC TERM 678 615052 - 615032 - g 100 -8.2 -5.24129 | opp_overlap 615032 TTGTCTCATAAAAAA GCAGCTGG AACGG CCAGCGGC TTTACAGGATGGTTC uhpC 613865 - 615235 + | sugar phosphate permease TERM 679 615381 - 615341 - g 86 -11.9 -3.0873 | opp_overlap 615342 615346, overlap 615346 CAAAGCAGTGGAATA TCAAATTCCCGCGCTCGCT CTT ACCGATCACGGGAATTTGT TTGGCGCGGTCGAAT TERM 680 615342 - 615380 + G 100 -13.2 -3.54424 | opp_overlap 615341 615346, overlap 615346 AAAGCAGTGGAATAT CAAATTCCCGCGCTCGCT CTT ACCGATCACGGGAATTTG TTTGGCGCGGTCGAA TERM 681 615346 - 615376 + G 87 -8.2 -4.41616 | opp_overlap 615341 615346, overlap 615342 CAGTGGAATATCAAA TTCCCGCGCTCGCT CTT ACCGATCACGGGAA TTTGTTTGGCGCGGT TERM 682 615376 - 615346 - g 89 -10.4 -3.93038 | opp_overlap 615346 615342, overlap 615341 CAGTGGAATATCAAA TTCCCGCGCTCGCT CTT ACCGATCACGGGAA TTTGTTTGGCGCGGT TERM 683 617389 - 617409 + G 70 -7.7 -3.60151 | opp_overlap 617389 CTCTCATGGAACCTA TTCTAAAAG AAA CTTTTGGAA TTATGGTTTACCAAG TERM 684 617525 - 617508 - g 82 -5.6 -5.03314 | GCTATGGGGAAAAAA GACCAT GAACAG ATGGTC AAGGAACGAGAGAAA TERM 685 618404 - 618382 - g 79 -7.8 -4.31692 | opp_overlap 618382 AAGTCACTACTAAAA TTTCCTCTGC AGA GCAGAAAAAA TTTGCACTTTTACAA dnaE 615249 - 618962 + | DNA polymerase III subunit alpha TERM 686 619091 - 619140 + T 74 -10.1 -2.87211 | gap 1, opp_overlap 619104 619105, overlap 619104 619105 CTAAAAAATTTTGAG GCTCTCTAGCAAACGAAGGCGGAG CTA CTCCACCTTCATTT-CAAGAGAGA TCTATGAAAAAAGCT TERM 687 619128 - 619104 - T 95 -12.9 -3.72695 | opp_overlap 619091 619104 619105, overlap 619105 AGGCTCTCTAGCAAA CGAAGGCGGAG CTA CTCCACCTTCA TTTCAAGAGAGATCT TERM 688 619104 - 619128 + T 71 -8.5 -3.53563 | opp_overlap 619104 619105, overlap 619091 619105 AGGCTCTCTAGCAAA CGAAGGCGGAG CTA CTCCACCTTCA TTTCAAGAGAGATCT TERM 689 619127 - 619105 - T 95 -14.2 -2.83403 | opp_overlap 619105 619104 619091, overlap 619104 GGCTCTCTAGCAAAC GAAGGCGGAG CTA CTCCACCTTC ATTTCAAGAGAGATC TERM 690 619105 - 619127 + T 85 -12 -2.71924 | opp_overlap 619104 619105, overlap 619104 619091 GGCTCTCTAGCAAAC GAAGGCGGAG CTA CTCCACCTTC ATTTCAAGAGAGATC CTA_0596 620060 - 619191 - | hypothetical protein TERM 691 620011 - 619999 - G 70 -7.7 -3.65224 | ATTCTATGTGAATAA GGGAT CTT ATCCC AAAACACAATAGAAC TERM 692 620144 - 620161 + H 85 -2.7 -5.8096 | opp_overlap 620144 AAACAAAAGCTATAA GAGATTT GACA AATTCTC TTTTTCTTTTTTATG TERM 693 620636 - 620622 - g 73 -10 -2.96839 | opp_overlap 620621, overlap 620621 620619 AAAGCGTAAAAATAT CCTTCC TTT GGAAGG GTTCCCTAAGTTGTT CTA_0597 620212 - 621168 + | TPR repeat-containing protein CTA_0598 621193 - 621777 + | hypothetical protein rsbW 621764 - 622204 + | sigma regulatory factor-histidine kinase TERM 694 622224 - 622249 + T 70 -2.5 -5.05601 | gap 1, overlap 622227 622229 ATCTATCCATCTATT GAA-GGCGGGCG TAA TGCCCGTAATTC TTTTTCTGTATCCTG TERM 695 622229 - 622243 + T 75 -9.2 -3.21909 | overlap 622227 622224 TCCATCTATTGAAGG CGGGCG TAA TGCCCG TAATTCTTTTTCTGT CTA_0600 622636 - 622211 - | hypothetical protein TERM 696 623539 - 623510 - g 73 -3.6 -4.99861 | overlap 623501 623511 CAGGAACTACAAAAA GTGCAGGGAAAA ATATCA TTTTCGCTGCAG AAAAGAACAATCGCT TERM 697 623827 - 623799 - g 75 -8.2 -3.75766 | opp_overlap 623799, overlap 623792 CCTAGAACCCAATAA GATCTCTTTCCC CATTC GGAAAGGAGATC TTCTAGGCCATTGGA dacC 622744 - 624057 + | D-alanyl-D-alanine carboxypeptidase TERM 698 624080 - 624096 + F 79 -5.1 -5.28826 | TCTAAGAAATCTTTA GCGGA CTTTTTT TCCGC TTTTTTCTAAGATTT CTA_0602 624191 - 624598 + | hypothetical protein fmu 624595 - 625701 + | 16S rRNA m(5)C 967 methyltransferase brnQ 625851 - 627086 + | branched-chain amino acid transport system carrier protein TERM 699 627113 - 627139 + F 100 -13.9 -4.17048 | opp_overlap 627115 GCAATTGTTTGAAGC CATCCCTTACT GAATA AGTAAGGGATG TTCTTTTGCCCGGAA TERM 700 627137 - 627115 - f 76 -10.7 -2.52795 | opp_overlap 627113 AATTGTTTGAAGCCA TCCCTTACT GAATA AGTAAGGGA TGTTCTTTTGCCCGG TERM 701 627183 - 627169 - f 73 -2.8 -5.1848 | overlap 627170 AAGCAACCCAAAAAA CGCCTT TAG AAGACA CCTATCTACTCCTAA TERM 702 629981 - 629963 - g 73 -3.8 -5.03994 | overlap 629965 629979 GTTCACACATAAAAA TGCATCCG AAA CAGATGAA GATATTATTTCTTCT TERM 703 630308 - 630290 - g 78 -5.3 -5.04175 | TGAATCATACAAAAA CCATTCC TCTGG GAAATGG GCTGCTTTTGTGAAA CTA_0605 627261 - 630860 + | SWF/SNF family helicase CTA_0606 631038 - 631517 + | hypothetical protein lpdA 631726 - 633123 + | dihydrolipoamide dehydrogenase TERM 704 633270 - 633243 - g 95 -7.8 -4.92756 | gap 1, opp_overlap 633243 633244, overlap 633244 ACTATCAAAAATAAA GGGCTTCCT-ACA GTC TGTGAGGAAGCCT CTTGTCCGAATCGCA TERM 705 633244 - 633269 + G 84 -11.3 -3.22475 | gap 1, opp_overlap 633244 633243, overlap 633243 CTATCAAAAATAAAG GGCTTCCT-ACA GTC TGTGAGGAAGCC TCTTGTCCGAATCGC TERM 706 633269 - 633244 - g 89 -11.3 -3.54027 | gap 1, opp_overlap 633243 633244, overlap 633243 CTATCAAAAATAAAG GGCTTCCT-ACA GTC TGTGAGGAAGCC TCTTGTCCGAATCGC TERM 707 633449 - 633415 - g 70 -5.9 -4.25566 | opp_overlap 633415 633415, overlap 633416 AAGAAGGAGCTAAAA TTGCT-GAGTCCGCAAA AGC TTTG-GGACTCAAGCAC ATTGTCATCACTATG TERM 708 633448 - 633416 - g 72 -9.4 -3.14255 | opp_overlap 633415 633415, overlap 633415 AGAAGGAGCTAAAAT TGCT-GAGTCCGCAAA AGC TTTG-GGACTCAAGCA CATTGTCATCACTAT TERM 709 633930 - 633944 + G 75 -5.7 -4.59342 | TATCGCTCGGTAGGA GAGTC GTTAG GACTC TTTATTTATGCTGGC lipA 633120 - 634055 + | lipoyl synthase TERM 710 635054 - 635025 - g 72 -7.9 -3.8211 | gap 1, overlap 635029 635042 TTTCACTCAGAATAA GCCAGCTCCAAAAG AAA CTCCTGGAGC-AGC AGAAGGTGCAGAAGC TERM 711 635051 - 635029 - g 74 -10.6 -2.69073 | overlap 635025 635042 ACTCAGAATAAGCCA GCTCCAAAAG AAA CTCCTGGAGC AGCAGAAGGTGCAGA sctJ 634159 - 635139 + | SctJ CTA_0610 635140 - 635976 + | hypothetical protein sctL 636252 - 636923 + | type III secretion system protein sctR 636936 - 637856 + | type III secretion system protein sctS 637868 - 638152 + | SctS sctT 638159 - 639028 + | SctT TERM 712 639067 - 639041 - T 100 -13.1 -6.30182 | opp_overlap 639044 TGATATAAAAAAAAA GAACTCCCTCC AAAAA AGAGGGAGTTC TTCACACCACGTAAG TERM 713 639044 - 639064 + T 73 -8.3 -3.61517 | opp_overlap 639041 TATAAAAAAAAAGAA CTCCCTC CAAAAAA GAGGGAG TTCTTCACACCACGT CTA_0615 639550 - 639107 - | hypothetical protein TERM 714 639461 - 639475 + g 80 -2.8 -5.45802 | overlap 639458 GACCTTTGGATTTGT GTGC AAATCAC GCAC TTTTTGTTTTAGAGA CTA_0616 640633 - 639641 - | hypothetical protein TERM 715 640003 - 640016 + g 71 -2.4 -5.1244 | ACAATAAATTCAACC TACC CTGATT GGTA TTTTTCTCTTCATAG CTA_0617 641163 - 640639 - | hypothetical protein CTA_0618 641603 - 641148 - | hypothetical protein gspG 641916 - 641587 - | general secretion pathway protein G gspF 643153 - 641978 - | general secretion pathway protein F gspE 644670 - 643165 - | general secretion pathway protein E TERM 716 644527 - 644537 + g 91 -6.8 -5.44119 | opp_overlap 644526 CACCTCATCCAAAGC CTCC AAA GGAG TTTTTTTCAAATGCC gspD_1 646936 - 644654 - | general secretion pathway protein D TERM 717 644973 - 644951 - G 91 -8.4 -4.58283 | opp_overlap 644951 CAACTCTCCTAAAAA TGGAATCCCG TCA CGAGAATCCA TAGTTTGATTACAAC CTA_0623 648166 - 646937 - | hypothetical protein TERM 718 647134 - 647158 + g 73 -10.1 -3.06384 | overlap 647131 647137 647139 CTAAAAGAGGGCTCC GAAGCTTACCT GAT AGGTAATCTTC TAATTGTCTTTTTGA TERM 719 648288 - 648241 - R 100 -7.5 -5.18371 | opp_overlap 648249, overlap 648244 648249 TTTTACAAAAGAAAA TAAGAAAAGCCG-TTTTTTTGTT AAAA AACAAAAAAATCGGCTTTTA-TA TGAAATTAAATGATA TERM 720 648286 - 648244 - R 100 -11.7 -4.66746 | gap 1, opp_overlap 648249, overlap 648241 648249 TACAAAAGAAAATAA GAAAAGCCG-TTTTTTTGTT AAAA AACAAAAAAATCGGCTTTTA TATGAAATTAAATGA TERM 721 648281 - 648249 - R 100 -11.6 -5.14949 | gap 1, opp_overlap 648249, overlap 648244 648241 AAGAAAATAAGAAAA GCCG-TTTTTTTGTT AAAA AACAAAAAAATCGGC TTTTATATGAAATTA TERM 722 648249 - 648281 + r 100 -11.6 -4.55118 | gap 1, opp_overlap 648249 648244 648241 AAGAAAATAAGAAAA GCCG-TTTTTTTGTT AAAA AACAAAAAAATCGGC TTTTATATGAAATTA pepP 649364 - 648294 - | Xaa-Pro dipeptidase TERM 723 649024 - 648996 - G 76 -9.7 -3.26449 | overlap 648991 TTTCACACAACGTAA CTTCTCCGCAA CTAAACT TTGCGGAGAAA ATGCATACCCGCTGT mutL 651105 - 649375 - | DNA mismatch repair protein TERM 724 651191 - 651208 + H 75 -9.9 -3.02461 | CAAGCCTTTCGCGCA GGAGGTA ACGG TACCTCC TGTTAAAAAAAATTG TERM 725 651231 - 651221 - H 95 -5.4 -5.75342 | TCCTGTTAAAAAAAA TTGC AAG GCAA CGACACACGCTGCTG TERM 726 651547 - 651523 - g 82 -5.7 -5.07486 | overlap 651525 GATTTGGAACAAAAA TATCCTGTTCC TAC GGAAGAGGAGA CAAAACAAGTTCTCA TERM 727 651545 - 651525 - g 79 -8.3 -4.16307 | overlap 651523 TTTGGAACAAAAATA TCCTGTTCC TAC GGAAGAGGA GACAAAACAAGTTCT lcrH_1 651400 - 652098 + | type III secretion chaperone/low calcium response protein H CTA_0627 652115 - 652474 + | hypothetical protein TERM 728 653630 - 653620 - g 73 -5.4 -4.66609 | CAGCGCAGGGAAAAA TGCT GTT AGCA AATCGTTCCCTAAAC CTA_0628 652511 - 653974 + | hypothetical protein TERM 729 653971 - 653981 + F 70 -2.6 -5.14965 | CTTAGCCGCCGCAGC TTAA CTA TTAA TTTTTTGATGGAGAT CTA_0629 654005 - 655324 + | hypothetical protein TERM 730 655367 - 655394 + T 91 -7 -5.35815 | gap 1, opp_overlap 655367 AACTCAGCTTCAGAA CCGTAGGCATCCT AAA AGGGC-CCTACGG TTTTTCTTTACTCTG CTA_0630 656355 - 655402 - | hypothetical protein TERM 731 656400 - 656388 - H 70 -9.1 -3.21416 | opp_overlap 656393 656398 GACCGCCACCATGAA CCGTG TCG CACGG ATCTGCGATCCGTTC TERM 732 656398 - 656412 + H 79 -10 -3.48276 | opp_overlap 656388, overlap 656393 ATGAACCGTGTCGCA CGGATC TGC GATCCG TTCTATAGAACAACC TERM 733 656647 - 656667 + H 85 -2.5 -5.72622 | overlap 656664 AAAAAGAGACGATTC TTTGCAGCG GTT TGCAGTAAA TTTTTTATTTATGGA TERM 734 657406 - 657394 - g 86 -3.3 -5.71638 | opp_overlap 657394 GAAGAAGCAAAAAAA CGCGA CCA TCGAG TTCTTGGAACAAAGT TERM 735 658197 - 658208 + G 73 -5.8 -4.48902 | AAGTACACCTATTAT GCTC CATA GAGC TTTGTTTGGATCTAT thrS 656689 - 658596 + | threonyl-tRNA synthetase TERM 736 658602 - 658634 + F 100 -12.1 -4.43397 | opp_overlap 658600 658599, overlap 658599 658603 TTCCTTATAGAAGGC CGGGCTTGCATAG ATTCTGC CTATGCAAGCCCA TTATTTCTTTTCACA TERM 737 658603 - 658633 + F 100 -15.6 -3.24954 | opp_overlap 658600 658599, overlap 658602 658599 TCCTTATAGAAGGCC GGGCTTGCATAG ATTCTGC CTATGCAAGCCC ATTATTTCTTTTCAC minD 659047 - 659814 + | ParaA family ATPase TERM 738 660547 - 660536 - gf 71 -3 -4.98758 | opp_overlap 660536 AAAAAGTTACAAAAA GTTA CAAC TAAC CTTCTTTCTAACACT gp6D 659819 - 660610 + | virulence plasmid protein pGP6-D-related protein CTA_0634 660576 - 661127 + | hypothetical protein TERM 739 661598 - 661620 + G 95 -7.9 -5.12617 | GCAATCGGCTATCCC TGAGATTTA TGAAT TAAATCTCA TTTTTTCCATGCTTA trpS 661326 - 662366 + | tryptophanyl-tRNA synthetase TERM 740 662803 - 662787 - g 72 -9.5 -3.13403 | overlap 662785 CGCCTTTCAGCAACA CGTTCTA TCT TAGAACG CCGAGATACTCTTAT TERM 741 664380 - 664356 - g 84 -3.5 -5.54894 | overlap 664358 664359 AATGCAGCAAAAAAA CAGCTCCTCTT TCA AAAAGGAGAAG AAGAAAATGGGGACT uvrB 662391 - 664397 + | excinuclease ABC subunit B eno 664559 - 665833 + | phosphopyruvate hydratase rbsU 665960 - 667912 + | sigma regulatory family protein-PP2C phosphatase TERM 742 668381 - 668395 + G 71 -4.2 -4.82756 | opp_overlap 668381, overlap 668373 TAGCATCCGTACAAA GAATCC TCG GGATCC TTTTGTTCGTTATAT CTA_0639 668037 - 669845 + | hypothetical protein CTA_0640 672724 - 669860 - | hypothetical protein TERM 743 672101 - 672081 - G 74 -6.2 -4.43208 | opp_overlap 672081 ATAGGCTTAAATAAA TCTCCTAC ACACG GTAGAAGA TTGATCGGAACGGAA TERM 744 672575 - 672590 + g 95 -3.2 -6.15828 | overlap 672576 ATAACTGGCTAACTT CCTTGC AATA GCAAGA TTTTTTTTTGCTAAA TERM 745 672576 - 672589 + g 74 -6.7 -4.2787 | overlap 672575 TAACTGGCTAACTTC CTTGC AATA GCAAG ATTTTTTTTTGCTAA TERM 746 672779 - 672769 - R 74 -5.4 -4.69053 | opp_overlap 672769 TACCATGGAATAAAA TTGC GAT GCAA TCTTCGAAACTTAAG sdhB 673519 - 672821 - | succinate dehydrogenase iron-sulfur subunit sdhA 675478 - 673598 - | succinate dehydrogenase flavoprotein subunit sdhC 676044 - 675475 - | succinate dehydrogenase cytochrome b558 subunit CTA_0644 676261 - 676070 - | succinate dehydrogenase cytochrome b558 subunit TERM 747 676279 - 676263 - R 74 -8.7 -3.41025 | overlap 676261 676259 AATAAAGTAAACACA CATCCCG ATA CGGAATG AATACATCATATAAT ycfH 677274 - 676483 - | PHP superfamily hydrolase dsdD 679437 - 677359 - | DsbD TERM 748 677688 - 677678 - G 71 -4 -4.82901 | TTTTCGGGAGAAAAA GATT GCC AATC AGAGCTATGTGCAGG TERM 749 679086 - 679061 - G 81 -12 -2.53263 | overlap 679083 679084 TTTATCTCCAATGGA CGCGTTTCTA TCTCTT TAGAAACGCG AATATCCGCAACCAC TERM 750 679475 - 679488 + H 79 -2.4 -5.61881 | opp_overlap 679475 TAGCAAATCATCAAA CAAC AGAAGA GTTG TTTTTGTTTTTGCAA exbB 679590 - 680288 + | component of a macromolecule transport system exbD 680285 - 680692 + | ExbD/TolR family protein TERM 751 681056 - 681040 - g 78 -5.2 -5.03314 | overlap 681044 GCTACTCTCAAAAAA TTAGCT CAACT AGCTAA TCAGCTGGCCGAAGA CTA_0649 680695 - 681402 + | histone H1-I TERM 752 682085 - 682069 - g 91 -6.5 -5.47218 | overlap 682070 CTGCAGGGAAAAAAA TCCTTGC TAT GCAAGGG AATCAGTTTATGCCG TERM 753 682084 - 682070 - g 84 -10 -3.87608 | overlap 682069 TGCAGGGAAAAAAAT CCTTGC TAT GCAAGG GAATCAGTTTATGCC TERM 754 682261 - 682278 + G 76 -2.7 -5.38054 | gap 1 ACCCTTCCTTTAGCC CTG-ACGG CAC CCGTTTAG TTTTTGTTTCTAACA TERM 755 682528 - 682516 - g 77 -6.2 -4.68511 | CTGAACATAAAGAAA GCCC TTCTT GGGC TGCGGATAGTAACCA tolB 681402 - 682697 + | translocation protein TolB TERM 756 682873 - 682854 - g 79 -8 -4.2461 | opp_overlap 682854 682853 ACTCCGATGAAGAAA TTCAACAA GCTT TTGTTGAA GATTTTGATTCCAAA pal 682694 - 683260 + | peptidoglycan-associated lipoprotein papQ 683250 - 683852 + | soluble lytic murein transglycosylase and related regulatory proteins TERM 757 684051 - 684065 + G 74 -10 -3.21593 | overlap 684049 GCCCTCAGGTATTTC GCTTGC TGT GCAAGC TATTATGCAGGGATA CTA_0653 683923 - 684315 + | hypothetical protein ahpC 684923 - 684312 - | thioredoxin peroxidase groEL_2 686708 - 685203 - | chaperonin ybbC 688014 - 686785 - | hypothetical protein TERM 758 687898 - 687912 + g 75 -2.2 -5.29445 | AACCCGCTTGCCACG TATTTT CTC AAGATA TTTTTCTTCTTGAAA TERM 759 688647 - 688669 + G 70 -9.2 -2.83299 | overlap 688643 688642 688646 GAAGGAACGATTGCG TTTGAGGAAC GCG GTTCCTCAGG GTTTGGATATGATCC TERM 760 688674 - 688684 + G 70 -5.4 -4.55295 | GGTTCCTCAGGGTTT GGAT ATG ATCC TTTGTTTGTAAAACA CTA_0658 688212 - 688841 + | putative deoxyribonucleotide triphosphate pyrophosphatase CTA_0659 689054 - 688815 - | hypothetical protein ung 689728 - 689039 - | uracil-DNA glycosylase TERM 761 690223 - 690207 - g 80 -6.5 -4.8543 | opp_overlap 690206 690210 GAACCTCGATAAAAA GCTTTGC AAT GCAATGC AATTTACTATCTCTC TERM 762 691056 - 691036 - g 71 -3.3 -5.03715 | ATTAGCCTGAAAAAA TGCGGTA TTGGAGC TACCACA TTAGCCGCTCTTATG uvrD 689809 - 691713 + | DNA helicase TERM 763 691870 - 691886 + G 81 -5.2 -5.18355 | GATCTCGATAGCTTA GATTCT CCTCC AGAATC TTTTTCGTTTTTCCC rpoN 691717 - 693027 + | RNA polymerase factor sigma-54 TERM 764 693112 - 693085 - T 100 -14.3 -5.34381 | opp_overlap 693108 AAATGGAAATAAAAA GCCCAGAACAA CTTCTC TTGTTCTGGGC TGACAGAAGCTGTCA TERM 765 693108 - 693132 + T 85 -9.3 -4.28361 | opp_overlap 693085 CAACTTCTCTTGTTC TGGGCTGACAG AAG CTGTCAGATCA TTTTAATAAGATTGA pqqC 693830 - 693135 - | hypothetical protein TERM 766 693241 - 693272 + g 75 -3.1 -5.24796 | gap 2 TCTAACACTTTATCA GCGTCATCTTTGAGA AGCT TCTCAATGA-G-CGC TTTTTCTTCTCTAGC CTA_0664 694558 - 693827 - | hypothetical protein TERM 767 693965 - 693978 + gr 75 -8.1 -3.84514 | overlap 693969 AGGTGCCTGCTCTAT CACCG CTAA CGGTG TTTGCTCATTCCCCT TERM 768 694302 - 694321 + gr 82 -5 -5.28481 | opp_overlap 694294 TCATCAATCCCTGCA GAAGGAAT CAAA ATACCTTC TTTTTTCGTTAGATA TERM 769 694470 - 694500 + gr 78 -10.6 -3.06815 | gap 1, opp_overlap 694464 694459 ACTACCACACTCCGT TCTTGC-AGAGGC GGCAAA GCCTCTTGCAAGA TCTCTTGAAGCGAAT folA 695009 - 694530 - | dihydrofolate reductase TERM 770 694872 - 694893 + gr 78 -9.5 -3.65754 | AGACTCCCAAGTCTT TCGTCCCAT AATG ATGGGATGA TTTCGAATGGTTTCT folP 696358 - 695006 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 771 695981 - 695967 - G 70 -2.8 -5.06472 | overlap 695962 ATAGAAAGAAGAAAA GGTCTT TCT AATACC TTAGGATGTGGGATT folX 696729 - 696355 - | dihydroneopterin aldolase rpoD 698463 - 696748 - | RNA polymerase sigma factor TERM 772 696994 - 696966 - G 100 -11.1 -4.45945 | opp_overlap 696971 696989, overlap 696971 ACCGATGAATCAAAA CAAAACGCTCACG GTC CGTAAGCGTTTTC AAAACTTCTTTCATT TERM 773 696971 - 696989 + g 83 -8.8 -4.12599 | opp_overlap 696971 696966 TGAATCAAAACAAAA CGCTCACG GTC CGTAAGCG TTTTCAAAACTTCTT TERM 774 696989 - 696971 - G 100 -11 -5.18643 | opp_overlap 696971, overlap 696966 TGAATCAAAACAAAA CGCTCACG GTC CGTAAGCG TTTTCAAAACTTCTT CTA_0669 699901 - 698612 - | hypothetical protein TERM 775 699287 - 699306 + g 74 -6.4 -4.44448 | overlap 699263 699289 ATATTCATCATGCAG CTCTTGCT GATA AGCAAGCG TTTCTTTGAGCTCCT TERM 776 699796 - 699807 + g 86 -3 -5.63517 | opp_overlap 699796 GAAAGTATCGCGAAA TACA ATAG TGTA TTTTTTGTTTGGCAG TERM 777 700288 - 700268 - H 73 -8.3 -3.57462 | opp_overlap 700263 700284, overlap 700269 CATGTCATGCCGAAA GTCACAGCA GAT TGCTGTGAG GTGTCGCGTTTGTTC TERM 778 700287 - 700269 - H 81 -11.8 -2.74263 | opp_overlap 700263 700284, overlap 700268 ATGTCATGCCGAAAG TCACAGCA GAT TGCTGTGA GGTGTCGCGTTTGTT TERM 779 700413 - 700392 - g 73 -5.1 -4.62069 | opp_overlap 700392, overlap 700394 GTCGGACCTCAAAAA CGCCCTTCT GCAG AGAAGAGAG TTATCACTTCTAAGA rpsT 700350 - 700646 + | 30S ribosomal protein S20 CTA_0671 700878 - 701678 + | hypothetical protein TERM 780 701704 - 701727 + T 100 -13.2 -5.95166 | CACTACATCCTTGAA GCTCGCAGGT ATAT ATCTGCGAGC TTTTTTTTAATTAGA CTA_0672 704367 - 701734 - | hypothetical protein TERM 781 703794 - 703815 + g 84 -5.2 -5.40014 | ACTGAGCTGTAATAC GAGCTTTA CCTTCT TGAAGCTC TTTTTCTTGTTCTTT TERM 782 704379 - 704398 + H 71 -3.7 -5.00196 | opp_overlap 704379 ACATAAAAACAAAAC TAAAAAC TTTTAT GTTTTTA TTTTCTTATTTAAAA CTA_0673 704482 - 706998 + | hypothetical protein TERM 783 707008 - 707037 + T 90 -12.4 -3.65827 | opp_overlap 707008 GGTTAGACAAATAAA GCAGCTTAAAAA CAAAAA TTTTTAAGCTGC TTTCCCTCACGATTA TERM 784 707037 - 707008 - T 100 -13.1 -4.62441 | opp_overlap 707008 GGTTAGACAAATAAA GCAGCTTAAAAAC AAAA ATTTTTAAGCTGC TTTCCCTCACGATTA CTA_0674 709560 - 707062 - | hypothetical protein TERM 785 709758 - 709730 - R 100 -17.7 -5.79595 | opp_overlap 709726 TTTGAAAAGAAAAAA GAGCCAAAAAAGA AAT TCTTTTTTGGCTC CCCCTCAATTCACAA CTA_0675 711743 - 709788 - | CHLPN 76 kD protein-like TERM 786 711825 - 711798 - R 100 -8.4 -5.83226 | opp_overlap 711798 AAGGCAATAAAAAAA GCCCACATCC GTTATTTT GGGTGTGGGC TCTTAAAAGACTATC TERM 787 711798 - 711825 + r 79 -11.3 -3.02829 | opp_overlap 711798 AAGGCAATAAAAAAA GCCCACATCCG TTATTT TGGGTGTGGGC TCTTAAAAGACTATC CTA_0676 713191 - 711851 - | CHLPN 76 kD protein-like TERM 788 712584 - 712563 - G 72 -9.5 -3.20028 | overlap 712561 712564 TTCACGACAAAAGGA CCACCATGA ACAA TCATGGTGA AAGGAAGTTTCTCAC TERM 789 712583 - 712564 - G 76 -10.8 -2.51535 | overlap 712563 712561 TCACGACAAAAGGAC CACCATGA ACAA TCATGGTG AAAGGAAGTTTCTCA TERM 790 713409 - 713367 - R 89 -7.8 -5.0916 | opp_overlap 713381, overlap 713369 TTCTTAAGAGAAAAA GATGTCCTAAGAGACTAGCT TAC AGCTAGTTTCTTAGGATAGA CTGATGCCCTTTCCA TERM 791 713407 - 713369 - R 100 -14.8 -4.17211 | opp_overlap 713381, overlap 713367 CTTAAGAGAAAAAGA TGTCCTAAGAGACTAGCT TAC AGCTAGTTTCTTAGGATA GACTGATGCCCTTTC TERM 792 713381 - 713395 + r 79 -8.6 -4.1822 | opp_overlap 713369 713367 AGATGTCCTAAGAGA CTAGCT TAC AGCTAG TTTCTTAGGATAGAC mviN 715002 - 713392 - | hypothetical protein TERM 793 714468 - 714450 - G 82 -6.8 -4.75174 | opp_overlap 714452 CAGCTAATCCAAAAA TACGATTC CTC GAATCATA ATTCCGTGCTAAAAA nfo 715175 - 716041 + | endonuclease IV TERM 794 716104 - 716087 - T 100 -12.7 -6.15828 | TTTATGAAAAAAAAA GCCTCGC AAAA GCGAGGC TTCAAAGAACATATG rpsD 716767 - 716138 - | 30S ribosomal protein S4 TERM 795 716994 - 717005 + H 76 -3 -5.48514 | GTTTAGAAAGATACT GAAA AAGG TTTC TTTTTATTTCTTCAT TERM 796 717096 - 717108 + H 80 -7.7 -4.43012 | TTTTAAACAAACTTT TCGAG CTT CTCGA TTTTAATCTTAAGAT TERM 797 717492 - 717471 - g 78 -5.9 -4.84311 | GTCGATACAACAAAA CAAGGAAAA CACA TTTCCCCTG AAGAGTGGCATGAAA yceA 717150 - 718133 + | hypothetical protein TERM 798 718165 - 718139 - T 100 -11.6 -5.67967 | opp_overlap 718141 ACCAGCATAAAAAAA GAGACGCCCA TGTTCTG TGGGCGCCTC TTCCAAAGTCTTCTG ispA 719080 - 718205 - | dimethylallyltransferase TERM 799 719109 - 719131 + r 100 -13.6 -4.258 | opp_overlap 719112 CCTTCTTTTTCTCAT CAACCTTTGT TTG ACAAAGGTTG TTTCTTAGTAAATGG TERM 800 719128 - 719112 - R 74 -9.5 -3.14132 | opp_overlap 719109 TCTTTTTCTCATCAA CCTTTGT TTG ACAAAGG TTGTTTCTTAGTAAA glmU 719753 - 719136 - | glucosamine-1-phosphate acetyltransferase cpxR 720489 - 719806 - | CpxR CTA_0684 720668 - 720922 + | hypothetical protein CTA_0686 722692 - 721103 - | hypothetical protein TERM 801 722774 - 722746 - H 77 -8.3 -3.87694 | opp_overlap 722746 AACAAAACACTCAAA GTTTTTCAGCAAA AAG CTTGTTGAAAAAC TTGTTGACCACCTGT TERM 802 722746 - 722774 + H 80 -9.8 -3.62224 | opp_overlap 722746 AACAAAACACTCAAA GTTTTTCAGCAA AAAGC TTGTTGAAAAAC TTGTTGACCACCTGT hemB 722990 - 724006 + | delta-aminolevulinic acid dehydratase TERM 803 724052 - 724076 + T 95 -12.3 -3.92542 | opp_overlap 724051, overlap 724036 AGGAGGTTACCACAT TCTCTTTTGCG TAG CGTAAAAGAGA TTCTTTGACGATAGA CTA_0688 725429 - 724032 - | Na(+)-translocating NADH-quinone reductase subunit A TERM 804 725002 - 724988 - G 73 -2.8 -5.13741 | opp_overlap 724990, overlap 724990 CTAAGTTAATAAAAA CATCTC GAG GAGATT GTGTTGGAAGAGCTG TERM 805 725355 - 725343 - G 71 -9.1 -3.27676 | overlap 725341 725339 ATCCACGGAAACATA GGTGG GGT CCACC TTACCGCAAAAACCC CTA_0689 725885 - 725451 - | hypothetical protein TERM 806 725535 - 725555 + g 80 -9.1 -4.00756 | AGATTTGTGGGATGA GTGACCAAT ATC ATTGGTTAC TTCTTTGATAAGCTC TERM 807 725722 - 725734 + g 76 -2.7 -5.28755 | TCCTGCGATCTTTTG TCTAA TTC TTGGA TTTTTTCCTGTGTTT TERM 808 725846 - 725860 + g 82 -5.8 -5.00884 | TAGAGAGAATTTGTT TTATAG AAT CTATAA TTTTTTGAGCGGAAT TERM 809 725902 - 725919 + H 84 -4.3 -5.54403 | ACAAAAATCTCGATC TTTTATT TAAT AATAAAA TTTTTCTTGTTTTTT TERM 810 726805 - 726829 + G 75 -2.1 -5.3689 | overlap 726823 TGCGTCTTCTAAAGA TCCTTATGTAT TCG ATCCGAAAGGA TTTTCTTTTGTTTCT TERM 811 726823 - 726834 + G 71 -3 -5.01553 | overlap 726805 TTATGTATTCGATCC GAAA GGAT TTTC TTTTGTTTCTCAATT TERM 812 727321 - 727334 + G 79 -3.1 -5.39681 | overlap 727312 GATTGAGCAGCCTTT GCTTT GTCC AGAGC TTTTTGTTTGGTTAT TERM 813 727763 - 727733 - g 74 -4.1 -4.91852 | CGTATGAAAAACAAA CTACAATCTCT GGTAGGGAA AGAGATGGTAG AGAATGCTAAGGAAA TERM 814 728046 - 728029 - g 70 -5.7 -4.2679 | TAATCCGGATGAAAA GATTTTA TCAC TAAAATC TAAACTGGCCCAAGA greA 725999 - 728146 + | fused transcript cleavage factor/uncharacterized domain-containing protein tyrB 728334 - 729536 + | aromatic amino acid aminotransferase CTA_0693 729511 - 730521 + | cell shape-determining protein recB 733617 - 730537 - | exodeoxyribonuclease V beta chain TERM 815 732482 - 732499 + g 74 -9.9 -3.10464 | overlap 732484 TTAGAAAAGATCTGC CACTGAC GTTT GTCAGTG TCTTGGAATTCATCG TERM 816 732868 - 732854 - G 82 -8.5 -4.37658 | AATTGTTGCACAAAA GCGGG GAGTT CCCGC TCGATAGAGAGATCG TERM 817 733306 - 733320 + g 73 -3.6 -4.99043 | ATTACGGATCTTCAT GTAAAG CTG TTTTAC TTTTGTTTCTGAGGA TERM 818 733580 - 733570 - G 74 -4 -5.06816 | overlap 733556 AGCTTCTAAGAAAAA TTTC CCA GAAA CAGAAGCTGTTGGTG recC 736639 - 733619 - | exodeoxyribonuclease V gamma chain TERM 819 735159 - 735139 - G 71 -4.1 -4.77079 | overlap 735134 735141 TAGAGAGGAAGAAAA TATTTTCTA AAG TAGAAAAGA TAAGACGAGAGTGCT TERM 820 735381 - 735396 + g 70 -2.5 -4.96762 | TAGTGCGTAAGTTTA TGGGT AAGGAA GCCCA TTTTTGTAGTCTCTA TERM 821 735906 - 735886 - G 74 -9.8 -3.14931 | opp_overlap 735884 GCGATTTGTGAGCAA GGTTAGCA AGTAA TGCTAACC GATCCGTTAATACAT TERM 822 736729 - 736745 + G 80 -3.7 -5.37865 | TATAAATGACAATCT CTATAAG TTT CTTTTAG TTTTTTCCTTGTTAG ygeD 736652 - 738331 + | macrolide-efflux protein CTA_0697 739166 - 738351 - | hypothetical protein TERM 823 738676 - 738654 - G 78 -4.3 -5.19819 | gap 1, opp_overlap 738660 AAATAAAACGAAAAA CAGAAAGAAA TGCG TTTCTT-CTG CTGATCGGAACAGGG TERM 824 739464 - 739477 + H 71 -6.7 -4.15788 | opp_overlap 739464, overlap 739466 739467 GTCTTTCACATATAA GCTCT TTTG AGAGC TTTCTTGGAAAGCTT TERM 825 740019 - 739998 - H 75 -3.1 -5.19328 | opp_overlap 739999, overlap 739999 740000 ATCGTATAAGAAAAA GGTTTTTTT TTTA AAAAAAAGC TTTTGTGCGAGAGAC TERM 826 739999 - 740019 + H 72 -6.3 -4.36914 | opp_overlap 739998 739999 740000 TCGTATAAGAAAAAG GTTTTTTTT TTA AAAAAAAGC TTTTGTGCGAGAGAC TERM 827 742514 - 742503 - g 74 -4.4 -4.91873 | TATATTAAGGAAAAA GGAT TGCA ATCC CCTCAAAATAAAAAA TERM 828 742620 - 742605 - g 73 -2.6 -5.08824 | GCGCTATCTAAAAAA TTAAGC GCGC ACTTAA TCAAGGAAGAGTAGG topA 740061 - 742634 + | fused DNA topoisomerase I/SWI domain-containing protein yohI 743668 - 742664 - | oxidoreductase CTA_0700 743943 - 743647 - | integral membrane protein TERM 829 744437 - 744420 - g 73 -9.9 -2.93335 | opp_overlap 744419, overlap 744419 TGTTACAAAGACAAT CTGTTGC GTTA GCAACAG CTCTCTTAGAGGAGA CTA_0701 744044 - 745423 + | hypothetical protein TERM 830 745619 - 745599 - g 88 -11.1 -3.83844 | GGTAGCAATCAAGAA TGCGCGGCT GAA AGCAGCGCA TAAACAAGCGAGTTT CTA_0702 745423 - 746001 + | hypothetical protein TERM 831 746587 - 746605 + G 80 -6.1 -4.82901 | opp_overlap 746587 746601 TCACCGAAGAAGGAA GTTTGTT AAAGA AACAAAC TTTTTGTAAAGGGCA TERM 832 746960 - 746950 - g 74 -4 -4.93318 | GAGAAGGTAGAAAAA TGTT ATT AACA TGGTCCCAAGGTATT CTA_0703 745992 - 747266 + | hypothetical protein TERM 833 747352 - 747375 + G 70 -3.8 -4.77165 | opp_overlap 747352 747356 747357 TGTCCAGCGCAGAGA TGAAGCAGCT CGTG AGCTGATGCA TTTTGTTATGCAGAC ygfA 747269 - 747805 + | 5-formyltetrahydrofolate cyclo-ligase TERM 834 748029 - 747999 - f 76 -9.1 -3.74872 | opp_overlap 748006 748022, overlap 748001 748004 ACTGACGCCACGAAA TATAAGAGGTCGC AGATG GCAACCTCTTAAA GTAGAGTCTTCTAGA TERM 835 748027 - 748001 - f 85 -11.7 -3.4582 | opp_overlap 748006 748022, overlap 747999 748004 TGACGCCACGAAATA TAAGAGGTCGC AGATG GCAACCTCTTA AAGTAGAGTCTTCTA TERM 836 748024 - 748004 - f 76 -9 -3.86252 | opp_overlap 748006 748022, overlap 748001 747999 CGCCACGAAATATAA GAGGTCGC AGATG GCAACCTC TTAAAGTAGAGTCTT TERM 837 749020 - 749003 - g 79 -8.5 -4.16279 | opp_overlap 749015 GAGAGGAGTTGAAAA GGAACAA AGAG TTGTTCC ACGAGTTGGAACGCT recA 748066 - 749124 + | recombinase A TERM 838 749147 - 749185 + F 100 -12.7 -5.18726 | opp_overlap 749150 749154 749160, overlap 749148 749150 TATTCTTTATAGATC TAATCAAGGAAAAGAAG TTTTT CTTCTTTTCCTTGATGG TTTTTCTTCTCCCCA TERM 839 749148 - 749184 + F 100 -14 -3.70512 | opp_overlap 749150 749154 749160, overlap 749147 749150 ATTCTTTATAGATCT AATCAAGGAAAAGAAG TTTTT CTTCTTTTCCTTGATG GTTTTTCTTCTCCCC TERM 840 749150 - 749182 + F 100 -16.6 -3.42342 | opp_overlap 749150 749154 749160, overlap 749148 749147 TCTTTATAGATCTAA TCAAGGAAAAGAAG TTTTT CTTCTTTTCCTTGA TGGTTTTTCTTCTCC TERM 841 749182 - 749150 - f 100 -16.6 -3.15999 | opp_overlap 749150 749148 749147, overlap 749154 749160 TCTTTATAGATCTAA TCAAGGAAAAGAAG TTTTT CTTCTTTTCCTTGA TGGTTTTTCTTCTCC TERM 842 749178 - 749154 - f 85 -11.6 -3.39856 | opp_overlap 749150 749148 749147, overlap 749150 749160 TATAGATCTAATCAA GGAAAAGAAG TTTTT CTTCTTTTCC TTGATGGTTTTTCTT TERM 843 750231 - 750205 - g 83 -8.9 -4.16205 | gap 1, opp_overlap 750205 CAGAAGCAAATGAAA GGTTTTG-ATGC GGTA GCATACAAAACC TTTTTCCCAGAAAGC TERM 844 750205 - 750231 + G 93 -8.9 -4.56597 | gap 1, opp_overlap 750205 CAGAAGCAAATGAAA GGTTTTG-ATGC GGTA GCATACAAAACC TTTTTCCCAGAAAGC TERM 845 751119 - 751139 + G 100 -12.7 -3.53444 | opp_overlap 751110 751109, overlap 751137 ATACACGGAAGCTTT GGAAGTCTT TCA AAGACTTCC TTTAGGGGAGGATAC CTA_0706 749410 - 751236 + | hypothetical protein TERM 846 752489 - 752521 + G 83 -9.2 -3.95324 | opp_overlap 752489, overlap 752491 752498 ATTGCGTTTCACGAA TGGGGAGATTCTGC ATCAA GCAGATTTTCCCTA TTATTCTTACAACTA TERM 847 752491 - 752519 + G 76 -9.6 -3.56318 | opp_overlap 752489, overlap 752489 752498 TGCGTTTCACGAATG GGGAGATTCTGC ATCAA GCAGATTTTCCC TATTATTCTTACAAC TERM 848 752498 - 752512 + G 70 -5.7 -4.32048 | opp_overlap 752489, overlap 752491 752489 CACGAATGGGGAGAT TCTGC ATCAA GCAGA TTTTCCCTATTATTC recD_2 751233 - 752723 + | exodeoxyribonuclease V alpha chain CTA_0708 752789 - 752968 + | hypothetical protein TERM 849 753019 - 753041 + T 100 -15.6 -3.28712 | opp_overlap 753019 GGTTTCTATTATTAA GACCTGGGCG TTG TGCCCAGGTC TTGTGAAAAACGGGA TERM 850 753041 - 753019 - T 100 -14.9 -3.21099 | opp_overlap 753019 GGTTTCTATTATTAA GACCTGGGC GTTGT GCCCAGGTC TTGTGAAAAACGGGA yhbG 753788 - 753069 - | ABC transporter ATP-binding protein CTA_0710 754285 - 753797 - | hypothetical protein kdsA 755091 - 754282 - | 2-dehydro-3-deoxyphosphooctonate aldolase CTA_0713 755577 - 755870 + | hypothetical protein TERM 851 755887 - 755923 + G 73 -10.4 -2.52516 | gap 2, overlap 755886 GGAGATTCGCTACTT CTTAGCACGACCTCTTCT CGA AGAAGAGGT-GTGC-AGG CTTGCTAATAACAGG CTA_0714 755870 - 756187 + | hypothetical protein TERM 852 756491 - 756510 + G 70 -7.9 -3.72576 | opp_overlap 756489 756494 756497, overlap 756494 GAAGTGGAATTGATA GAAGAGG AAGAAC CCTCTTC TTTAATCCCGGAAGA TERM 853 757055 - 757078 + G 93 -12.4 -3.01188 | overlap 757039 757038 GGCACACCGATTCTC GGAGATCCCG TTTA CGGGATCCCC TCTATAAATTTTCGT sfhB 756269 - 757276 + | ribosomal large subunit pseudouridine synthase D CTA_0716 757376 - 757612 + | hypothetical protein TERM 854 757606 - 757629 + T 90 -9.6 -4.71382 | opp_overlap 757604 757606 AGAAATTATGGAAGA GCGGTAAACG TATA CGTTTACAGC TTTTTGAGTCATTGT TERM 855 757629 - 757606 - T 74 -9.6 -3.14454 | opp_overlap 757606, overlap 757604 AGAAATTATGGAAGA GCGGTAAACG TATA CGTTTACAGC TTTTTGAGTCATTGT gyrA_2 759223 - 757751 - | DNA topoisomerase IV subunit A TERM 856 759038 - 759012 - G 70 -9.3 -2.78935 | AGAGCTTCCACGATA GGCGCATCACC ATGCG GGTGCAGCGCC ATCGTACGTCCTGCG TERM 857 759121 - 759099 - G 72 -10 -2.82142 | overlap 759098 759109 TCCATACGGAATAAG GTCCAAAGAA GCC TTCTTTGAAC AGGCTTGAGGCCATC gyrB_2 761055 - 759238 - | DNA topoisomerase IV subunit B TERM 858 759611 - 759596 - G 72 -6.2 -4.24342 | GTTTTTAGGAAGAAA GTAATC ATAA GATTAC GAATATGCATACCAT TERM 859 760020 - 760045 + g 70 -5.5 -4.56597 | gap 1, opp_overlap 760043 GTTTGATTTTCTCTT GGATCCGTTCCG CGC TGGAA-GGATTC TTTTTCAAAGAAGAG TERM 860 761555 - 761600 + G 73 -5.5 -4.68384 | overlap 761559 ATTTTACAACAAGCA CAGGGGTCTTTTCGTCTTGAA GTCT TTCAAGAAGAGAAGGACTATG TTTTATTGGCTACGT TERM 861 761824 - 761853 + G 100 -12.3 -4.78848 | opp_overlap 761820 761819 761830, overlap 761826 CTATTTACAAGCTGC TAGAGAGCAAAAG CTTT CTTTTGCTCTCCA TTTTCTCTTTCAAAA TERM 862 761826 - 761851 + G 100 -14.9 -2.67228 | opp_overlap 761820 761819 761830, overlap 761824 ATTTACAAGCTGCTA GAGAGCAAAAG CTTT CTTTTGCTCTC CATTTTCTCTTTCAA hemA 761435 - 762442 + | glutamyl-tRNA reductase TERM 863 762946 - 762934 - f 83 -7.7 -4.61873 | CTTTAGAAATCAAAA GAACG AGT CGTTC GTGCCCGATTTTTTT CTA_0720 763161 - 763562 + | hypothetical protein TERM 864 765704 - 765720 + G 77 -10.9 -2.78211 | overlap 765703 GAACGTTCATGTGTC CTTCACC AAT GGTGAAG CTGTTTTGACAGGAT TERM 865 765798 - 765783 - g 70 -7.6 -3.61517 | ACGGTTGTGCAAGAA CTGCAA GATA TTGCAG GGATTCGTGCGGTGA CTA_0721 763566 - 766055 + | phosphopeptide binding protein CTA_0722 766099 - 766350 + | hypothetical protein CTA_0723 766377 - 766628 + | hypothetical protein CTA_0724 766647 - 767096 + | hypothetical protein TERM 866 767416 - 767393 - g 77 -6.1 -4.58395 | gap 1, overlap 767394 767395 TCCATTTGTTAAAAA GTCGTTTGTG GGATG CACAAACG-C AGATGCAAATGCAAG TERM 867 767415 - 767395 - g 71 -9.8 -2.60508 | overlap 767393 767394 CATTTGTTAAAAAGT CGTTTGTG GGATG CACAAACG CAGATGCAAATGCAA CTA_0725 767116 - 767787 + | hypothetical protein sctN 767789 - 769117 + | type III secretion system ATPase TERM 868 769453 - 769436 - g 74 -4.1 -5.02323 | overlap 769438 TGAGCAGAAAGAAAA TGTGCTG GCAG CAGCAAA GGAGCTGGAAAGGGC CTA_0727 769140 - 769646 + | hypothetical protein CTA_0728 769650 - 770501 + | hypothetical protein TERM 869 771076 - 771097 + G 70 -9.5 -2.76696 | gap 1, opp_overlap 771076, overlap 771075 TCTTAGTGCCTGAAA CTACAG-CGC AGA GCGCCTGTAG ATTCTTAGAAGAGAA TERM 870 771097 - 771076 - g 76 -9.5 -3.54424 | gap 1, opp_overlap 771076 771075 TCTTAGTGCCTGAAA CTACAG-CGC AGA GCGCCTGTAG ATTCTTAGAAGAGAA TERM 871 771207 - 771226 + G 81 -4.3 -5.27476 | gap 1, overlap 771207 771209 TCAGAAGAAGATTGG C-ACCAGG TTGTT CCTGGTAG TTTTATTTTGTTAGA sctQ 770511 - 771632 + | type III secretion system protein TERM 872 772724 - 772699 - g 93 -12 -3.59262 | GCTTACATCTGGAAA CGTAGCAGAA TTTTGG TTCTGCTACG CTCCAGGAAACTGTA pkn5 771767 - 773239 + | putative serine/threonine-protein kinase PAR-1 TERM 873 773461 - 773444 - g 70 -7.1 -3.90048 | overlap 773442 CTTGTCCTAAAAATA TTGCTAA GAAT TTAGCAA AGAAAAGCTCTCCGG TERM 874 773873 - 773852 - g 73 -5.2 -4.73094 | overlap 773847 773853 AAGAGCAACAGAAAA CCATTTCC AATCCA GGAAATGA CCAGACTCTTCCTGG TERM 875 774993 - 774964 - g 77 -10.8 -2.75844 | opp_overlap 774967 774975, overlap 774963 GTTGTCATTGGAAAT CAAGCTAACGTC GATAAG GTCGTTAGCTTG CTAAATGGGTTGGAC gspD_2 773236 - 776001 + | general secretion pathway protein D TERM 876 776078 - 776120 + T 91 -9.3 -4.87786 | gap 1 GTACACAGGGGGGAA GTCAAGATGGACTGGAGTTA GCCG TATCTCCGGTTC-TCTTGGC TTTTTATGGAGTTAG karG 777387 - 776317 - | ATP:guanido phosphotransferase CTA_0734 777898 - 777377 - | hypothetical protein TERM 877 778163 - 778186 + r 83 -3.8 -5.61596 | CGATGGGGCCAGGAC GGGTCTAATG TTAT CACTAAACCC TTTTTTTCTGCAACT frr 778799 - 778260 - | ribosome recycling factor TERM 878 778703 - 778715 + g 72 -6.2 -4.28049 | TAACCGTTTCTACCA GCGC TGGGT GCGC TTTTCCAGTTTTGAA pyrH 779533 - 778796 - | uridylate kinase TERM 879 778884 - 778866 - G 75 -8.2 -3.90744 | opp_overlap 778864 778866 GCCTCTTCTAAAGAA TGTCTAGC AAA GCTAAACA TCTTTATGGGGATTC tsf 780394 - 779546 - | elongation factor Ts TERM 880 779623 - 779647 + g 70 -7.9 -3.737 | opp_overlap 779623 779625, overlap 779645 CAGCTCTATCAATCA GACCTTGAATT GTG ACTTCAGGGTC TTTAATAAAGGCTTG TERM 881 779678 - 779657 - G 85 -9.5 -4.15222 | opp_overlap 779645 779657, overlap 779673 779676 AGGGTCTTTAATAAA GGCTTGTTC TAAC AAACAAGCC TCTTGGAAAAAGGCC TERM 882 779692 - 779676 - G 73 -7.3 -4.20367 | opp_overlap 779657, overlap 779657 779673 TGTTCTAACAAACAA GCCTCTT GGA AAAAGGC CTTAAATTTCCCTTG rpsB 781239 - 780391 - | 30S ribosomal protein S2 TERM 883 780453 - 780437 - G 77 -3.7 -5.21709 | opp_overlap 780437 780438, overlap 780438 780449 GCCCAGAGTAAAAAA CCTTCTT TAG AAGAAGC TTCATCTTGAGCTTC TERM 884 780471 - 780497 + g 75 -10.3 -2.77013 | gap 1, overlap 780470 CATCTTGAGCTTCAC CTGTTGGAAGAG GCAA CTCTTCC-ACAG CTTCTTCCGCAGGTC TERM 885 780758 - 780793 + g 70 -7.6 -3.64283 | gap 1, opp_overlap 780751 780769 ATTACAATCAGAAGC CCTGGGAGAGAGTTCAT ATG ACGAACGC-CTTCCAGG TTGTTGAGCAATTTG TERM 886 781540 - 781515 - R 100 -11.1 -5.63504 | AAGTTTATAAAAAAA CTGGACCCGAC CGAA GCCGAGCCCAG AAACACGGATAGCGT ompA 782807 - 781617 - | major outer membrane protein TERM 887 783150 - 783130 - H 78 -3.3 -5.40072 | overlap 783132 TTTTTGCGAAAAAAA TCGCTCT GAAACCG AGAGCAA AAGCCATGTTGGCAA TERM 888 783163 - 783153 - H 75 -6.8 -4.37534 | AAACCGAGAGCAAAA GCCA TGT TGGC AAGATGTTGATTGTT TERM 889 785084 - 785039 - g 74 -6.4 -4.51097 | gap 1, opp_overlap 785037 785035 785034 785041, overlap 785040 785041 CCAACTACGATAAAA TTCTATTTCTGGATCTATTGC GTACG GCAGTAGATCCAGAAA-AAAT CTCTATCTCTTTATT TERM 890 785083 - 785040 - g 76 -9.9 -3.29935 | gap 1, opp_overlap 785037 785035 785034 785041, overlap 785039 785041 CAACTACGATAAAAT TCTATTTCTGGATCTATTGC GTACG GCAGTAGATCCAGAAA-AAA TCTCTATCTCTTTAT TERM 891 785041 - 785083 + G 84 -11.5 -3.13685 | opp_overlap 785040 785041 785039, overlap 785037 785035 785034 AACTACGATAAAATT CTATTTCTGGATCTATTGC GTACG GCAGTAGATCCAGAAAAAA TCTCTATCTCTTTAT TERM 892 785083 - 785041 - g 80 -11.5 -2.57238 | opp_overlap 785037 785035 785034 785041, overlap 785040 785039 AACTACGATAAAATT CTATTTCTGGATCTATTGC GTACG GCAGTAGATCCAGAAAAAA TCTCTATCTCTTTAT TERM 893 786103 - 786140 + G 83 -11.4 -3.02144 | opp_overlap 786094, overlap 786106 GGAAGAGTGCCTATC GATGTCGCATATAACC GTTCGG GGTTATATGCGACTGC TATTGGGCAACATAC TERM 894 786106 - 786137 + G 100 -16.1 -2.73875 | opp_overlap 786094, overlap 786103 AGAGTGCCTATCGAT GTCGCATATAACC GTTCGG GGTTATATGCGAC TGCTATTGGGCAACA pbpB 783415 - 786657 + | penicillin-binding protein TERM 895 786979 - 787024 + G 70 -9.2 -2.88579 | gap 1, opp_overlap 786988 786989, overlap 786973 786987 786988 TGTTATGGCGTGGCT TTAGATAAAG-CCGATCGCTT AGAAG AAGCGATCGGGCATTATCAAG TGTATACAGAGTTAC TERM 896 786988 - 787015 + G 76 -10.7 -2.61239 | gap 1, opp_overlap 786988 786989, overlap 786973 786987 786979 GTGGCTTTAGATAAA G-CCGATCGCTT AGAAG AAGCGATCGGGC ATTATCAAGTGTATA TERM 897 787014 - 786988 - g 90 -10.9 -4.03234 | opp_overlap 786973 786987 786979 786988, overlap 786989 GTGGCTTTAGATAAA GCCGATCGCTT AGAAG AAGCGATCGGG CATTATCAAGTGTAT TERM 898 787013 - 786989 - g 100 -14.4 -3.01726 | opp_overlap 786973 786988 786987 786979, overlap 786988 TGGCTTTAGATAAAG CCGATCGCTT AGAAG AAGCGATCGG GCATTATCAAGTGTA TERM 899 787458 - 787469 + G 82 -5.8 -4.98522 | opp_overlap 787458 787456 GTTAAATGCAGAAGA TGCG GATG CGCA TTTTTATATAGGATT CTA_0744 786721 - 787728 + | TPR repeat-containing protein TERM 900 787859 - 787875 + F 79 -8.7 -3.94746 | AAGTTTTTTTCTTAA GGGCTGT TTG ACAGTCC TTTCCTTGGGTCTAG TERM 901 787883 - 787917 + F 79 -7.9 -4.29546 | overlap 787885 787892 GACAGTCCTTTCCTT GGGTCTAGGGAGAGA CATCC TCTTTCCCTAGGCTG TCTTTCTTTTTTTTT TERM 902 787885 - 787915 + F 95 -12.7 -3.65523 | overlap 787883 787892 CAGTCCTTTCCTTGG GTCTAGGGAGAGA CATCC TCTTTCCCTAGGC TGTCTTTCTTTTTTT TERM 903 787892 - 787923 + F 100 -5.2 -6.06723 | overlap 787885 787883 TTCCTTGGGTCTAGG GAGAGACATCCT CTTTCCCT AGGCTGTCTTTC TTTTTTTTTCAAGAA CTA_0745 788071 - 789522 + | cysteine desulfurase activator complex subunit SufB TERM 904 789862 - 789828 - g 76 -7.9 -4.17316 | gap 1, opp_overlap 789827 ATTTTCTTAAAAGAA GCTTGTAATGCCTGCC GAAA GGCACGCAAT-CAAGC AGTTTTAGATGATGC CTA_0746 789525 - 790292 + | ABC transporter ATP-binding protein TERM 905 790574 - 790588 + G 76 -2.7 -5.40072 | opp_overlap 790584, overlap 790575 CATCGTGGCCCCTTT ACGCG AAGCA CGCGC TTTTTTTCAGAAGCG TERM 906 790885 - 790855 - g 87 -8.3 -4.56775 | opp_overlap 790856, overlap 790856 ATCTTTTGGGAAAAA CGCTCTGTTTCCT AGGCG AGGAAGCAGAGCT TGTTTTGACCATGAA TERM 907 790856 - 790884 + G 100 -14 -4.18506 | opp_overlap 790855 790856 TCTTTTGGGAAAAAC GCTCTGTTTCCT AGGCG AGGAAGCAGAGC TTGTTTTGACCATGA TERM 908 790884 - 790856 - g 89 -11.8 -3.33744 | opp_overlap 790856, overlap 790855 TCTTTTGGGAAAAAC GCTCTGTTTCCT AGGCG AGGAAGCAGAGC TTGTTTTGACCATGA TERM 909 791400 - 791414 + G 75 -5.7 -4.67234 | opp_overlap 791399 791400 ATAGAAGCCAAACAG GCTCT ACAAA AGAGC TTTTTGACATTAGAT CTA_0747 790296 - 791483 + | ABC transporter-associated protein TERM 910 792100 - 792117 + G 82 -7.7 -4.4891 | AATCTTTCTGAATGG GGCGTAG ATTT CTATGCC TTTTCTGGTCATAAG TERM 911 792187 - 792215 + G 100 -15.4 -2.84192 | overlap 792183 792213 AAAGAACTTTTGGAA TCGCTTCCTCCT GTTGA AGGAGGAGGCGA TATGGTGATCGTATA yfhO_2 791476 - 792681 + | cysteine desulfurase TERM 912 793472 - 793456 - g 71 -9.5 -3.00017 | opp_overlap 793454, overlap 793453 793468 GTGAAAGGTAAAGGA GCTTCTT TGA AAGAAGC CAGTTCTTCACAACC parB 792817 - 793662 + | hypothetical protein dppF 794484 - 793654 - | ABC transport ATPase TERM 913 793741 - 793716 - G 73 -10.5 -2.53911 | GTAATTGTGAATGGA GCAGCATTCGT GTGT AGGAATGCTGC GGATTACAAAAGATT dppD 795442 - 794477 - | ABC transport ATPase TERM 914 795271 - 795229 - G 100 -17.2 -4.72272 | opp_overlap 795215 795222, overlap 795231 TCTCTTTATTAAAAA GAGCTTCTCCTGAAAGAGAA AAG TTCTCTTCCGGGAGAAGCTG CATAAGAGATTGTGC TERM 915 795269 - 795231 - G 100 -19.8 -3.98256 | opp_overlap 795222, overlap 795229 TCTTTATTAAAAAGA GCTTCTCCTGAAAGAGAA AAG TTCTCTTCCGGGAGAAGC TGCATAAGAGATTGT TERM 916 795513 - 795502 - H 80 -3 -5.63504 | opp_overlap 795502 AATCTTAGAAAAAAA CAAA AAGT TTTG GTTCTTAGTACATTC CTA_0752 795603 - 796277 + | hypothetical protein TERM 917 796800 - 796816 + G 100 -10.1 -4.83615 | ATCCCGTCTCTGCTA TGGTGCG TAT CGCGCCA TTTTTATCGGCGATC TERM 918 796982 - 796994 + G 70 -7.7 -3.72027 | TTTAAACTTGCGATT CTTCC TCA GGAAG TTCTTCCTGGAACAT CTA_0753 796280 - 797560 + | low-affinity inorganic phosphate transporter TERM 919 798006 - 797982 - g 100 -13.6 -3.47078 | opp_overlap 797969 797982 GATTGTATAGGAGAA GTCGCGCGAC AGGCG GTCGCGCAAC TTTCTCCTGGTAGAG TERM 920 797982 - 798006 + G 100 -11.4 -3.99324 | opp_overlap 797982, overlap 797969 GATTGTATAGGAGAA GTCGCGCGAC AGGCG GTCGCGCAAC TTTCTCCTGGTAGAG pgk 797688 - 798899 + | phosphoglycerate kinase TERM 921 798948 - 798932 - f 86 -9.4 -4.4078 | opp_overlap 798932 CTTTGTTAATGAAAA GCCCTG TTTAT CAGGGC TTTTTTTTTGTTTAA TERM 922 798932 - 798948 + F 100 -9.4 -6.4753 | opp_overlap 798932 CTTTGTTAATGAAAA GCCCTG TTTAT CAGGGC TTTTTTTTTGTTTAA CTA_0755 799158 - 800129 + | hypothetical protein TERM 923 800752 - 800770 + G 75 -8.8 -3.66256 | GGTGGGTTTGCTTTT GCGTATGG CTA CCTTACGC TCTTTTGAACATGTC TERM 924 801024 - 801014 - g 75 -5.4 -4.82901 | GTTCGTTTAGAAAAA GAAG ACC CTTC TTCAGACTATTCTCA TERM 925 801314 - 801324 + G 78 -5.4 -5.05606 | opp_overlap 801311, overlap 801311 CGTATGATCGAAGGT TTGG TAA CCAA TTTCTTTTTCTTACC CTA_0756 800180 - 801376 + | hypothetical protein TERM 926 801903 - 801916 + G 71 -6.7 -4.12456 | TCAAAAGGAAATTTT TCGTC TTGG GACGA TTTTACACATGATGT TERM 927 802070 - 802087 + G 89 -7.1 -5.00616 | opp_overlap 802078 802079 GTACCTCTCTGTAAG TTTCGAA ATTC TTCGAAA TTTTTTAGAAGAGAA TERM 928 802358 - 802393 + G 73 -8.4 -3.64822 | gap 1, opp_overlap 802362, overlap 802359 802361 802362 GCAAGCATTTTTAGC AGAA-GTTGTGTTGCAC GTG GTGCAACACCACATTCA TTTAAATGCAAAGGT TERM 929 802359 - 802392 + G 83 -11.9 -2.78679 | gap 1, opp_overlap 802362, overlap 802358 802361 802362 CAAGCATTTTTAGCA GAA-GTTGTGTTGCAC GTG GTGCAACACCACATTC ATTTAAATGCAAAGG TERM 930 802361 - 802389 + G 80 -10.3 -3.54408 | opp_overlap 802362, overlap 802359 802358 802362 AGCATTTTTAGCAGA AGTTGTGTTGCAC GTG GTGCAACACCACA TTCATTTAAATGCAA TERM 931 802362 - 802388 + G 95 -13.8 -2.72324 | opp_overlap 802362, overlap 802361 802359 802358 GCATTTTTAGCAGAA GTTGTGTTGCAC GTG GTGCAACACCAC ATTCATTTAAATGCA TERM 932 802388 - 802362 - g 100 -13.8 -3.41051 | opp_overlap 802362 802361 802359 802358 GCATTTTTAGCAGAA GTTGTGTTGCAC GTG GTGCAACACCAC ATTCATTTAAATGCA TERM 933 802607 - 802591 - g 76 -9.5 -3.53012 | CGCCTTTTTGGCAAA TGATTCC CTC GGAATCA GGAGATGGAACTTTC CTA_0757 801462 - 802640 + | hypothetical protein nth 803272 - 802637 - | endonuclease III TERM 934 802904 - 802888 - G 78 -2.3 -5.4477 | AAATGCTTAAAAAAA CAGAA GCTGTTT TTCTG CCTACTCCTGGAAGA trmE 804613 - 803279 - | tRNA modification GTPase TrmE TERM 935 805144 - 805154 + G 90 -4 -5.60993 | CTGCACGACTACGCG TCAT TTA ATGA TTTTTTTGTACGAAA psdD 804880 - 805785 + | phosphatidylserine decarboxylase TERM 936 806046 - 806033 - g 77 -4.5 -5.03314 | CCGATCCTGAAAAAA CGTCA ATAT CGACG TAAATATTTATTCGA TERM 937 806185 - 806214 + G 81 -5.1 -5.23765 | gap 2 ACATAAGGCTTTCCG GCATG-GC-GCCT ATAAAG AGGCTGCACATGC TTTTTCTCTTCTTTC CTA_0761 805850 - 807175 + | TPR repeat-containing protein TERM 938 807162 - 807177 + F 71 -3.2 -5.12474 | overlap 807163 TAGAGGTTTCTTTAC TGCTAG CTGC CTAGCC TTTTTCTCTCTTGTA TERM 939 807216 - 807236 + F 89 -3.9 -5.70761 | CAATATAAGATCTTA GCCCTCG TATTGCT CGAGTGC TTTTTGTTTTCTTTT TERM 940 808473 - 808492 + G 72 -9.4 -3.2059 | opp_overlap 808466 808465, overlap 808471 808469 808475 ATAAAGAGCAATGTC TAGAGAAG CTCT CTTCTCTA TATATTGTAGTCGAT TERM 941 808718 - 808703 - g 71 -3.2 -4.92385 | overlap 808705 GATACGCAAAGAAAA GCCC GAGCTCAT GGGC TACGGCAGCTGTTAA TERM 942 809165 - 809141 - g 71 -10.1 -2.71924 | overlap 809140 CATCGTTCCGGAAAG CCGATTCTG ATCGGGA CAGAATCGG TGGAGGTGTCTGAGA secA 807434 - 810343 + | preprotein translocase subunit SecA TERM 943 810360 - 810385 + T 100 -13.4 -4.78848 | opp_overlap 810357 810360 AGGCTTGTCAAACTA GGCAATCTCC TTAATT GGAGATTGCC TTTTCTATTTAGAGA TERM 944 810385 - 810360 - T 95 -13.4 -2.90615 | opp_overlap 810360, overlap 810357 AGGCTTGTCAAACTA GGCAATCTCC TTAATT GGAGATTGCC TTTTCTATTTAGAGA CTA_0763 810964 - 810437 - | hypothetical protein TERM 945 811016 - 811028 + r 78 -3.5 -5.43866 | overlap 811001 811000 TTTTATTATTTCTAA TAAAA GAT TTTTA TTTTTTTACAAATTA engA 812513 - 811041 - | GTP-binding protein EngA TERM 946 812288 - 812258 - G 89 -11.3 -3.43492 | gap 2, opp_overlap 812252, overlap 812261 812267 GGATATCTACTACAA GCAGCAGAACAGAGG CTT CCTCTG--CTGCTGC TAAAGCTTGTTGATG TERM 947 812288 - 812261 - G 81 -11.4 -2.86747 | gap 1, opp_overlap 812252, overlap 812258 812267 TATCTACTACAAGCA GCAG-AACAGAGG CTT CCTCTGCTGCTGC TAAAGCTTGTTGATG TERM 948 812281 - 812267 - G 78 -10 -3.48684 | opp_overlap 812252, overlap 812258 812261 CTACAAGCAGCAGAA CAGAGG CTT CCTCTG CTGCTGCTAAAGCTT pcnB_2 813861 - 812629 - | polyA polymerase TERM 949 813044 - 813054 + g 71 -3.2 -4.96646 | overlap 813038 CGTAAGCGAGAGAAG GCTT CTA GAGC TTTTTCCTTGTCTAC TERM 950 813887 - 813917 + r 77 -6.2 -4.84146 | opp_overlap 813884 813880, overlap 813884 AAAGTTAAGCAATCG CCTCTGGTGATT TCTGAAT AATGACCGGAGG TTTATTTTGTGTGAT clpX 815135 - 813876 - | ATP-dependent protease ATP-binding subunit clpP 815756 - 815145 - | ATP-dependent Clp protease proteolytic subunit tig 817251 - 815923 - | trigger factor TERM 951 817440 - 817429 - H 90 -3 -5.93809 | opp_overlap 817429 GTTTTACAAAAAAAA CTTT GGAA AAAG GTTTTTTGAGAAGGT TERM 952 818939 - 818958 + G 70 -2.8 -4.98531 | gap 1, opp_overlap 818944, overlap 818943 TTAGCTATTTGGATG GAGAACTCG AGG CGAGA-CTC TTTTTCCTTTACGAC CTA_0770 817609 - 821100 + | SWF/SNF family helicase TERM 953 821608 - 821587 - g 74 -10.1 -3.09175 | AATTCTGATTGAAGA GCCTATGGC AGCA GCCATTGGC GTCGATCTCCCTGTA mreB 821105 - 822205 + | hypothetical protein TERM 954 822528 - 822509 - g 86 -12.2 -3.08371 | opp_overlap 822509 GAGATCCTCAAGAGA TGCGTGCA GAGC TGCACGCA TTATTCCGAGGGTGT TERM 955 822509 - 822528 + G 93 -12.2 -3.62224 | opp_overlap 822509 GAGATCCTCAAGAGA TGCGTGCA GAGC TGCACGCA TTATTCCGAGGGTGT TERM 956 823125 - 823137 + G 74 -4.1 -5.0538 | opp_overlap 823125 ATTATACGCAGTGAA TCCAG AAT TTGGA TTTTTTGGAGTGGCA pckA 822202 - 824001 + | phosphoenolpyruvate carboxykinase TERM 957 824096 - 824040 - f 73 -9.2 -2.89683 | opp_overlap 824040 824052 824057 ATTCTAGTTTAGATA CTATTGTTTTTCTGTTTTAAAAAACA TTTTT TATTTTTAAAATTAGAAAAACAATAG TTTTCTGGATGATCT TERM 958 824040 - 824096 + F 86 -9.2 -4.44245 | opp_overlap 824040, overlap 824052 824057 ATTCTAGTTTAGATA CTATTGTTTTTCTGTTTTAAAAAACA TTTTT TATTTTTAAAATTAGAAAAACAATAG TTTTCTGGATGATCT TERM 959 824052 - 824065 + F 93 -3.9 -5.93252 | opp_overlap 824040, overlap 824040 824057 ATACTATTGTTTTTC TGTTT TAAA AAACA TTTTTTATTTTTAAA TERM 960 825127 - 825143 + G 72 -7.3 -3.91027 | opp_overlap 825127 AATGAACAGGTCAAA CTCAACG GTC TGTTGAG TTTAGTATATGCTTA CTA_0773 824113 - 826416 + | hypothetical protein TERM 961 826440 - 826419 - f 79 -5.9 -4.92385 | opp_overlap 826406 826419, overlap 826414 TAGATTTAAATAAAA TCGTTTTAG AGGG CAAAAACGA TTATGAGAAACTATC CTA_0774 826443 - 827615 + | hypothetical protein ompB 828663 - 827641 - | outer membrane protein B gpsA 829800 - 828796 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase CTA_0777 831164 - 829797 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 962 830828 - 830814 - G 71 -9.2 -2.98881 | overlap 830809 830816 AGAGGAAACAGGATA GAGCCC TTT GGGCCC ATCAAATTTTAATCG CTA_0778 831541 - 831176 - | hypothetical protein TERM 963 831373 - 831342 - G 75 -8.8 -3.5936 | opp_overlap 831335 TGTAAATGTTCTAAA TGTTGGTCATATTC ATGG GTATATGACCGACA TAGGAATTGTTTGTG TERM 964 831509 - 831496 - G 71 -6.7 -4.07885 | opp_overlap 831495 TACGTTTCTTGAAAA GCTCA ATAG TGAGC AGTTTAGACAGATCT fliI 832838 - 831534 - | type III secretion system ATPase CTA_0780 833436 - 832912 - | hypothetical protein TERM 965 833178 - 833208 + g 74 -6.2 -4.56597 | overlap 833179 TTAGGAGAGCAAGTT CTTCTGTACAGGCA AGC TTTCTGTACAGAAA TTTTTCACAGACGAG TERM 966 833179 - 833207 + g 76 -9.7 -3.33744 | overlap 833178 TAGGAGAGCAAGTTC TTCTGTACAGGCA AGC TTTCTGTACAGAA ATTTTTCACAGACGA TERM 967 833352 - 833319 - G 80 -9.7 -3.68302 | opp_overlap 833325 833350, overlap 833325 GGAACACCTGAATAA GAGAAAGAAGCTC ATGGGAGA GAGCTTCTTGCTC AAAGAGAGGTGTTTC TERM 968 833346 - 833325 - G 70 -5.9 -4.34263 | opp_overlap 833325, overlap 833319 CCTGAATAAGAGAAA GAAGCTC ATGGGAGA GAGCTTC TTGCTCAAAGAGAGG fliF 834445 - 833441 - | type III secretion system protein TERM 969 834556 - 834545 - R 73 -4.4 -4.86773 | opp_overlap 834545, overlap 834539 834549 834550 GAAAAGGATGAAAAA GAAG GCTT CTTC TTGTGAACAAGAAGA CTA_0782 835500 - 834718 - | hypothetical protein yfhO_3 836651 - 835497 - | NifS-related protein TERM 970 836482 - 836501 + gr 89 -12.2 -3.32963 | overlap 836482 CCTGTGAGTTTGCGG GCAGAAGC TTCA GCTTCTGC TTGTAAAGTCAGAAT pgmA 837286 - 836606 - | phosphoglyceromutase TERM 971 837344 - 837355 + H 73 -3 -5.1925 | overlap 837333 CTTGTTTGCGGATTA TCTT TGCA AAGA TTTTTTACCTTATAA yjbC 837582 - 838307 + | ribosomal large subunit pseudouridine synthase B TERM 972 838366 - 838335 - f 81 -10.3 -3.61398 | opp_overlap 838341, overlap 838319 838341 TTTGGTCCTTAAGAA CAAAAAGAGGGAG GTCTTT CTCCCTCTTTTTT TTATTTAGAGGTACA TERM 973 838360 - 838341 - f 100 -9.3 -5.29445 | opp_overlap 838341, overlap 838335 CCTTAAGAACAAAAA GAGGGAG GTCTTT CTCCCTC TTTTTTTTATTTAGA TERM 974 838341 - 838360 + F 100 -10 -6.23545 | opp_overlap 838341 838335 CCTTAAGAACAAAAA GAGGGAGG TCTT TCTCCCTC TTTTTTTTATTTAGA TERM 975 838799 - 838812 + G 71 -3.1 -5.07652 | TGGAAGAACTACTTG CGTAT GAGA ATGCG TTTTCTTTTGAGGCC CTA_0786 838426 - 838950 + | hypothetical protein birA 838977 - 839531 + | biotin--protein ligase rodA 840677 - 839538 - | RodA TERM 976 840648 - 840662 + g 80 -2.8 -5.57888 | overlap 840650 AAAGACCCACAAGTT CACTTG ACG CAAGTA TTTTGTTTTTTTCAT TERM 977 840695 - 840718 + r 82 -11 -3.27771 | overlap 840694 CAGGGATGTTATTCG CGTCCTTCCC GCAA GGGAAGGAAG TCTTGCTGTTCTGCC zntA 842748 - 840769 - | lead, cadmium, zinc and mercury transporting ATPase TERM 978 841119 - 841144 + g 71 -9.1 -3.30124 | overlap 841122 TCTGCCGTGATTTAG CAAGTTCTTGA ATTT TCGAGAGCTTG TTATCAGGAGTCAGG TERM 979 842511 - 842498 - G 71 -9.5 -2.92936 | AAGGATTTAATGAGA GCGGG AGTT CCCGC TAAGAAAAAAGTAAG CTA_0790 843518 - 842772 - | hypothetical protein TERM 980 843292 - 843272 - G 80 -4.8 -5.24531 | gap 1, overlap 843274 AGCTGGTATAAAAAA TC-CAACTG ATCC CAGTTGCGA ATAGGATTTTTCCAT serS 844841 - 843555 - | seryl-tRNA synthetase ribD 844883 - 846010 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase TERM 981 846581 - 846615 + GF 71 -4.3 -4.77157 | gap 1, overlap 846583 846584 846588 CGAAGCTGCTATGGA TCTCATGCGGCTTGCA GGTA TGCA-GCCGTGTGGTA TTTTTGCTGAGTTAG TERM 982 846583 - 846613 + GF 72 -6.9 -3.9993 | gap 1, overlap 846581 846584 846588 AAGCTGCTATGGATC TCATGCGGCTTGCA GGTA TGCA-GCCGTGTGG TATTTTTGCTGAGTT ribA 846120 - 847394 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein ribH 847363 - 847836 + | riboflavin synthase subunit beta TERM 983 847847 - 847885 + T 78 -11.2 -2.61912 | opp_overlap 847851 847854 847857, overlap 847857 AATAAAACGGTGAGA AAAAGAAGAACGCCTGAT CAA ATCGGGCGTTTTTTTTTG ATTATAAATGGATAC TERM 984 847881 - 847851 - T 76 -5.4 -4.86033 | opp_overlap 847847 847857, overlap 847854 847857 AAACGGTGAGAAAAA GAAGAACGCCTGAT CAA ATCGGGCGTTTTTT TTTGATTATAAATGG TERM 985 847878 - 847854 - T 79 -7.1 -4.52873 | opp_overlap 847847 847857, overlap 847851 847857 CGGTGAGAAAAAGAA GAACGCCTGAT CAA ATCGGGCGTTT TTTTTTGATTATAAA TERM 986 847875 - 847857 - T 84 -8.8 -4.36508 | opp_overlap 847847 847857, overlap 847854 847851 TGAGAAAAAGAAGAA CGCCTGAT CAA ATCGGGCG TTTTTTTTTGATTAT TERM 987 847857 - 847875 + T 100 -11 -6.25242 | opp_overlap 847857 847854 847851, overlap 847847 TGAGAAAAAGAAGAA CGCCTGAT CAA ATCGGGCG TTTTTTTTTGATTAT CTA_0795 849233 - 847887 - | hypothetical protein TERM 988 848520 - 848504 - G 76 -7.9 -4.23758 | overlap 848506 AGTCCAGAGCTAAAA GAGCTCG TTG CGAGCGC CCAGCAGACAGAAGC TERM 989 848518 - 848506 - G 75 -9.1 -3.71913 | overlap 848504 TCCAGAGCTAAAAGA GCTCG TTG CGAGC GCCCAGCAGACAGAA TERM 990 849430 - 849443 + H 83 -5.3 -5.4505 | GAGATTCTACCGGCT TCATG CTAA CATGA TTTTTTGTTAGGGGC TERM 991 849782 - 849770 - g 78 -10.5 -3.29829 | TACACTTCGCGAGAA GCCGG ATG CCGGC TGTAAAAAGAAATCT CTA_0796 849618 - 850283 + | hypothetical protein TERM 992 850341 - 850285 - f 72 -7.2 -4.03413 | opp_overlap 850293 850298, overlap 850297 850298 ACCCTGCTATATAAA GGCCATTCTAAAGGCCCCCTTTCCCC GGATA GGAGAAAGGGGGCTTTTGTATTTTCC GCTTATTTGCCTCCG TERM 993 850293 - 850333 + F 100 -17 -3.71291 | opp_overlap 850285 850297 850298, overlap 850298 ATATAAAGGCCATTC TAAAGGCCCCCTTTCCCC GGATA GGAGAAAGGGGGCTTTTG TATTTTCCGCTTATT TERM 994 850329 - 850297 - f 100 -15.6 -3.61371 | opp_overlap 850293 850298, overlap 850285 850298 AAAGGCCATTCTAAA GGCCCCCTTTCCCC GGATA GGAGAAAGGGGGCT TTTGTATTTTCCGCT TERM 995 850328 - 850298 - f 100 -19.1 -2.7634 | opp_overlap 850293 850298, overlap 850297 850285 AAGGCCATTCTAAAG GCCCCCTTTCCCC GGATA GGAGAAAGGGGGC TTTTGTATTTTCCGC TERM 996 850298 - 850328 + F 100 -16.9 -4.89567 | opp_overlap 850298 850297 850285, overlap 850293 AAGGCCATTCTAAAG GCCCCCTTTCCCC GGATA GGAGAAAGGGGGC TTTTGTATTTTCCGC TERM 997 850816 - 850832 + G 73 -8.7 -3.43774 | AGGATATAAAATGGG CAGCCGA TTC TTGGCTG TTGCCTTTTGTGTCG dagA 850388 - 851755 + | Na(+)-linked D-alanine glycine permease TERM 998 851793 - 851764 - f 100 -14.4 -3.86266 | ACAGTAGTACAAGAA TAGGGCCACGCT TTACAG AGCATGGCCCTA AATACAGGAGACCTC TERM 999 851877 - 851897 + G 73 -8.2 -3.62607 | overlap 851875 AGTATTCGTGTCAGG GCGTTGGG ATCTC CCCACCGC TGTCTTTTTCTGATG ybcL 851813 - 852265 + | ATP/GTP binding protein CTA_0799 852933 - 852274 - | SET domain-containing protein yycJ 853718 - 852930 - | Zn-dependent hydrolase ftsK 856121 - 853722 - | hypothetical protein TERM 1000 855056 - 855071 + g 73 -2.6 -5.12785 | gap 1, opp_overlap 855028, overlap 855055 855054 AGCTAGCCAATGTTT GCTG-TA AAA TAGCAGC TTTCTTTTTTAATTC CTA_0803 856675 - 856463 - | hypothetical protein TERM 1001 857506 - 857490 - R 78 -10.1 -3.35597 | overlap 857488 GTTAGTTGTCAAAGA TCGGGGC TCA ACCCCGA GTCGGCATCTAATAC TERM 1002 858407 - 858388 - R 71 -9.2 -2.65808 | opp_overlap 858403, overlap 858384 858385 AGTCGTAACAAGGTA GCCCTACC GGAA GGTGGGGC TGGATCACCTCCTTT TERM 1003 859204 - 859192 - R 79 -7.7 -4.2354 | GAAAGGCGAAAAGAA CCCTT GTT AAGGG AGTGAAATAGAACCT TERM 1004 861917 - 861878 - R 100 -11.4 -4.84527 | opp_overlap 861879 861884, overlap 861879 861884 GTCACAGACTAAAAA GGAGAAGGGGGTAGCCGC TAAC GCAGTTACCCCCTTTTCT TTTCTCTAAAATACC TERM 1005 861879 - 861916 + r 100 -17.1 -4.54047 | opp_overlap 861879 861878 861884, overlap 861884 TCACAGACTAAAAAG GAGAAGGGGGTAGCCGC TAAC GCAGTTACCCCCTTTTC TTTTCTCTAAAATAC TERM 1006 861916 - 861879 - R 100 -14.9 -3.49993 | opp_overlap 861879 861884, overlap 861878 861884 TCACAGACTAAAAAG GAGAAGGGGGTAGCCGC TAAC GCAGTTACCCCCTTTTC TTTTCTCTAAAATAC TERM 1007 861884 - 861911 + r 100 -13.4 -5.23292 | opp_overlap 861879 861878 861884, overlap 861879 GACTAAAAAGGAGAA GGGGGTAGCCGC TAAC GCAGTTACCCCC TTTTCTTTTCTCTAA TERM 1008 861911 - 861884 - R 100 -13.4 -3.77111 | opp_overlap 861884 861879, overlap 861879 861878 GACTAAAAAGGAGAA GGGGGTAGCCGC TAAC GCAGTTACCCCC TTTTCTTTTCTCTAA dmpP 863656 - 862361 - | Na(+)-translocating NADH-quinone reductase subunit F TERM 1009 863446 - 863418 - G 70 -9.5 -2.8294 | opp_overlap 863417, overlap 863415 CATTGCTTACAAGCA GCTTTCCCTCCAC AAG GAGAAGGGATAGC GATTCCTGAATCTAA TERM 1010 863782 - 863757 - R 100 -14.1 -3.47322 | opp_overlap 863762, overlap 863762 TTTTATTACAAGGAA GCAAAGCCCAA GGAC CTGGGCTTTGC TGAAAGGAGCTCGTT yajC 864143 - 863799 - | preprotein translocase subunit YajC TERM 1011 864236 - 864258 + r 86 -11.4 -3.85698 | opp_overlap 864236 CAGCATTAGGAATAA GGCTTTCTTG TTT TAAGAAAGCC TTTCTAAGAGAACAA TERM 1012 864258 - 864236 - R 83 -10.7 -3.75738 | opp_overlap 864236 CAGCATTAGGAATAA GGCTTTCTT GTTTT AAGAAAGCC TTTCTAAGAGAACAA ygcA 865438 - 864248 - | rRNA methyltransferase TERM 1013 865177 - 865209 + g 80 -3.6 -5.28176 | overlap 865178 TAATTGGGATTCCTT TTTTAGGTTTTGAT GGAGA AATAAAACCTAAAG TTTTTTCTCCATCAA TERM 1014 865334 - 865345 + g 86 -5.8 -5.26119 | opp_overlap 865333 TGCAAATAAATTATG GAGC GCAA GCTC TTTTGTTTTTAAAGA TERM 1015 865599 - 865573 - R 81 -9.4 -3.98762 | opp_overlap 865575 AATGAGAAGAGGAAA GAGGGCCCTGTT GAT AAAAGTGCCCTC TATAAAAAAGAGAAA hctA 866003 - 865626 - | histone-like developmental protein TERM 1016 866679 - 866698 + G 70 -2.8 -4.92385 | AACAAGAGTTATGCT CGGAGCTT GTAA AACCTCTG TTTTCTTTAGCTGTA TERM 1017 867242 - 867230 - g 72 -7.7 -3.90588 | CATGCGTTAAGTAAA CTTCC ATG GGAAG AGACTCTTGGAGAAC TERM 1018 867788 - 867798 + G 87 -5.4 -5.46629 | opp_overlap 867766 867767 867788, overlap 867776 CCTGAGCCAGGGAAA GAAG GCT CTTC TTTTTTTAAGGTATT CTA_0810 866399 - 868867 + | phosphoprotein hemG 870133 - 868859 - | protoporphyrinogen oxidase hemN_2 871503 - 870130 - | coproporphyrinogen III oxidase TERM 1019 870558 - 870539 - GR 72 -5.8 -4.39166 | gap 1, overlap 870543 870548 GCCGATATACCAAAA CCTAGAAGA TCT TCTTC-AGG AGGAAGAGAGTACCC TERM 1020 871386 - 871359 - GR 71 -4.8 -4.62622 | overlap 871355 871380 GGAAGTATAAAGAAA GAGGATCTTGCT CCTG AGCAAGCCTCTC CAAGGCCGTATAGCC hemE 872486 - 871476 - | uroporphyrinogen decarboxylase TERM 1021 872366 - 872356 - GR 100 -4 -6.11644 | GTATCCAAAAAAAAA TCTT TCA AAGA ACGGTTTCTTTTCAG mfd 875738 - 872499 - | transcription-repair coupling factor TERM 1022 872917 - 872927 + g 71 -2.4 -5.13521 | TGTTTATGCTTCAGG GCAG CCA CAGC TTTTTTCAGTAATTT alaS 878341 - 875714 - | alanyl-tRNA synthetase TERM 1023 876112 - 876094 - G 82 -10.4 -3.61398 | opp_overlap 876078 876092 CTTGTTGCTGAACAA GCTGATTT TCC AAATCAGC AACTTGTTTGGCTAA CTA_0816 878721 - 878491 - | hypothetical protein TERM 1024 879552 - 879536 - H 78 -10.1 -3.35597 | overlap 879534 GTTAGTTGTCAAAGA TCGGGGC TCA ACCCCGA GTCGGCATCTAATAC TERM 1025 880453 - 880434 - H 71 -9.2 -2.65808 | opp_overlap 880449, overlap 880430 880431 AGTCGTAACAAGGTA GCCCTACC GGAA GGTGGGGC TGGATCACCTCCTTT TERM 1026 881250 - 881238 - H 79 -7.7 -4.2354 | GAAAGGCGAAAAGAA CCCTT GTT AAGGG AGTGAAATAGAACCT TERM 1027 883963 - 883924 - H 100 -11.4 -4.84527 | opp_overlap 883925 883930, overlap 883925 883930 GTCACAGACTAAAAA GGAGAAGGGGGTAGCCGC TAAC GCAGTTACCCCCTTTTCT TTTCTCTAAAATACC TERM 1028 883925 - 883962 + H 100 -17.1 -4.54047 | opp_overlap 883924 883925 883930, overlap 883930 TCACAGACTAAAAAG GAGAAGGGGGTAGCCGC TAAC GCAGTTACCCCCTTTTC TTTTCTCTAAAATAC TERM 1029 883962 - 883925 - H 100 -14.9 -3.49993 | opp_overlap 883925 883930, overlap 883924 883930 TCACAGACTAAAAAG GAGAAGGGGGTAGCCGC TAAC GCAGTTACCCCCTTTTC TTTTCTCTAAAATAC TERM 1030 883957 - 883930 - H 100 -13.4 -3.77111 | opp_overlap 883925 883930, overlap 883925 883924 GACTAAAAAGGAGAA GGGGGTAGCCGC TAAC GCAGTTACCCCC TTTTCTTTTCTCTAA TERM 1031 883930 - 883957 + H 100 -13.4 -5.23292 | opp_overlap 883930 883925 883924, overlap 883925 GACTAAAAAGGAGAA GGGGGTAGCCGC TAAC GCAGTTACCCCC TTTTCTTTTCTCTAA TERM 1032 884719 - 884753 + G 83 -8.8 -4.07885 | opp_overlap 884722, overlap 884722 TTCTTTAGGCTTGGA TAATCTCGTTTTGATT TAT GATCATAATGAGATTA TTTTAGACGGGACTC TERM 1033 885780 - 885743 - g 70 -9.3 -2.80077 | gap 1, overlap 885740 885739 TCTCGACAAAATCTA CCTACTCTTAAAGAGACG AAA CGT-TCTTTCAGAGAAGG AGTAAGAAAGGGTGC TERM 1034 886079 - 886045 - g 91 -12.2 -3.51934 | opp_overlap 886044 886043 886047, overlap 886043 GGGTTGGTACAAATA CATCGGTAGCAATGGC TTA GCCATTGCCATAGATG GGTTTGGAATGTCCG tktB 884168 - 886168 + | transketolase amn 887034 - 886165 - | AMP nucleosidase TERM 1035 886213 - 886242 + g 91 -7.2 -5.28831 | gap 1 AGAAAGAGAATCATC GGCTTGCC-CAAA CTCCA TGTGCGGCAAGCC TTTTGTTTTCTTGAT efp_2 887254 - 887826 + | elongation factor P TERM 1036 887856 - 887830 - T 91 -7.2 -5.50723 | opp_overlap 887836, overlap 887831 887833 GTATCAAAATAAAAA TTAGAAGGGGCA TTA CGCCCCTTCTTC AAGAAGGCGTTCCGC TERM 1037 887855 - 887831 - T 85 -10.7 -3.88807 | opp_overlap 887836, overlap 887830 887833 TATCAAAATAAAAAT TAGAAGGGGCA TTA CGCCCCTTCTT CAAGAAGGCGTTCCG TERM 1038 887853 - 887833 - T 100 -13.3 -3.50051 | opp_overlap 887836, overlap 887831 887830 TCAAAATAAAAATTA GAAGGGGCA TTA CGCCCCTTC TTCAAGAAGGCGTTC TERM 1039 887836 - 887850 + T 73 -8.5 -3.61398 | opp_overlap 887833 887831 887830 AAATAAAAATTAGAA GGGGC ATTAC GCCCC TTCTTCAAGAAGGCG TERM 1040 887872 - 887862 - T 73 -8.2 -3.61398 | opp_overlap 887861 CCCCTTCTTCAAGAA GGCG TTC CGCC ACTTTCCGAAATAAT CTA_0822 888066 - 887842 - | hypothetical protein icc 888985 - 888113 - | Icc family phosphohydrolase groEL_3 890604 - 889066 - | 60 kDa chaperonin GroEL TERM 1041 890493 - 890483 - G 74 -4 -5.00616 | CTCCCTTTGAAAAAA TCTT TCG AAGA AGAGGAGTACGCGGG TERM 1042 891070 - 891083 + G 70 -5.3 -4.47456 | CGCCCTATTTTGTTG GAAGA ATGG TCTTC TTTGTTATTAGGTAT TERM 1043 892353 - 892376 + G 76 -7.6 -4.19336 | gap 1, opp_overlap 892352 TGTGTTGTTAAAAGG GTCTCGTAGTT TAG AACTA-GAGAC TTTATTACCATGCTT murF 891052 - 892404 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 1044 892713 - 892736 + G 89 -3.8 -5.63236 | opp_overlap 892714, overlap 892714 ATAAAGACAAAGCAT ATATCCCTAC AGCT GGAGGGATAG TTTTTGTTTTTGCAT TERM 1045 892714 - 892735 + G 72 -7.3 -3.95502 | opp_overlap 892714, overlap 892713 TAAAGACAAAGCATA TATCCCTAC AGCT GGAGGGATA GTTTTTGTTTTTGCA TERM 1046 893201 - 893223 + G 95 -11.4 -3.76383 | TTCATTTGTTGTGTT CTTCTAGCTA CCT TAGCTGGAAG TTGTCTTGGATTTTT mraY 892550 - 893560 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 1047 893950 - 893987 + G 80 -9.9 -3.71075 | overlap 893949 TTATTCAAACGGTCT GGGATTCCTGCTTTCGC TATG GGGAATGTAGGAATTCC TATTTTAGATGGTAT TERM 1048 894552 - 894590 + G 75 -10.2 -2.82015 | TAAGGGATGCACGTT CTCTTCGCTTCTTCCCGC TTT GCGAAAAGCTGCGAAGAG TGTAGTCGCTATGGG murD 893572 - 894822 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase nlpD 894819 - 895556 + | muramidase TERM 1049 895589 - 895605 + GF 79 -3 -5.36441 | GAAATGGTTCCTGAT TTCCTG TTTAT TAGGAA TTTTTTCTCTCGGGC TERM 1050 895665 - 895690 + GF 74 -9.9 -2.78463 | gap 1, overlap 895652 GAGGTTTTGGATCGA GCTTTGTCGTGT AGT ACAC-ACAAAGC TCTGATCCGGCAGAT ftsW 895572 - 896729 + | hypothetical protein murG 896638 - 897696 + | N-acetylglucosaminyl transferase TERM 1051 899886 - 899896 + G 79 -3.2 -5.28176 | TAGGGAAAGGGTCGT GTCG TAT TGAC TTTTTTGTAGATGAA murC-ddlA 897701 - 900112 + | D-alanine--D-alanine ligase CTA_0833 900568 - 900149 - | hypothetical protein TERM 1052 900329 - 900354 + g 84 -2.5 -5.626 | overlap 900331 TGTGAGAGAGCCGTT TTCAGGTTGAG CAAG CTCAACAAGGA TTTTTTTCTGCAATC CTA_0834 901532 - 900726 - | hypothetical protein TERM 1053 901085 - 901062 - G 77 -3.8 -5.12617 | opp_overlap 901062 TAAGGATTGAAAAAA GGGCAAAGCT GGGA AGGTTTGTCC TTCATAACCTATGAA rbsV 901686 - 902018 + | anti-sigma F factor antagonist TERM 1054 902116 - 902138 + G 91 -12.8 -2.78384 | TTAAGCGGACAGTGA TTCTGTTGGC TGG GCCAACAGGA TCTGGTAAAACAGCG miaA 902022 - 903041 + | tRNA delta(2)-isopentenylpyrophosphate transferase CTA_0837 904098 - 903046 - | hypothetical protein TERM 1055 903308 - 903291 - G 100 -8.5 -5.49729 | AATTATCTAAAAAAA TTCTTGC CACC GCAAGAA TGCGGTAATAGAGTT TERM 1056 904776 - 904808 + G 71 -10.1 -2.6518 | opp_overlap 904774, overlap 904775 CGTTGGTTAGGAAGT TTCTCTTCTCAAATT ATC AATTTGAGAAAAGAG CTTATGAATATTAGC CTA_0838 904188 - 905876 + | hypothetical protein TERM 1057 905905 - 905933 + F 100 -9 -5.87688 | opp_overlap 905905 905904 905907 AGGAGTAAGAACAAG TAGTCAAAAGGT GAAGA GCCTTTTGGCTA TTTTTTTTAAATTGT ybeB 906330 - 906689 + | iojap superfamily protein fabF 906700 - 907956 + | 3-oxoacyl-(acyl carrier protein) synthase II CTA_0841 907953 - 908405 + | phosphohydrolase (MutT/nudix family protein) TERM 1058 908435 - 908472 + T 100 -12.8 -5.01546 | opp_overlap 908439, overlap 908440 AAAAAAACTTGGTTA GGAAGGGCCGTTGTGG AATCTC CCACAACAGCCTTTTC TTTTTCTGTCGATTT TERM 1059 908468 - 908439 - T 78 -10.7 -3.1506 | opp_overlap 908435 908440 AAACTTGGTTAGGAA GGGCCGTTGTGGA ATCT CCCACAACAGCCT TTTCTTTTTCTGTCG TERM 1060 908440 - 908467 + T 100 -11.3 -5.38839 | opp_overlap 908439, overlap 908435 AACTTGGTTAGGAAG GGCCGTTGTGG AATCTC CCACAACAGCC TTTTCTTTTTCTGTC ppa 909115 - 908486 - | inorganic pyrophosphatase ldh 909363 - 910403 + | leucine dehydrogenase cysQ 911397 - 910369 - | 3'(2'),5'-bisphosphate nucleotidase TERM 1061 910569 - 910556 - G 70 -3.8 -4.91109 | overlap 910557 910560 TTTGGATTAGAAAAA GGGA GAGGAT TCCC CGATATATCTGTAAC TERM 1062 911615 - 911595 - H 86 -9.9 -4.30719 | overlap 911607 CTTTTTGATAATAAA TGAAAAGAA TAG TTCTTTTCA GAATGCAAACCTGTT CTA_0845 911696 - 912457 + | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 1063 913755 - 913765 + G 74 -6.8 -4.4017 | opp_overlap 913755 TTATTCTTAAAAGGA CGAC TCA GTCG TTTTGTGAAGATTGG aas 912465 - 914078 + | long chain fatty acid--[acyl-carrier-protein] ligase TERM 1064 914264 - 914321 + GT 93 -12.1 -3.73775 | gap 1 AGGTTATGGAGGTTC GCGCGCTATTTTAGGCTCTTCCTCG-CT GTT AGATGGGGTAGAGCATCAAATAGCGCAC TTTCATGGAGCTCCA TERM 1065 914943 - 914923 - gT 70 -8.3 -3.31799 | opp_overlap 914922 914925 GAGAACTTGCGAGAA CACGATTAC GTC GTATTCGTG ACTATTTTGCTCAAA CTA_0848 917434 - 915173 - | primosome assembly protein PriA bioF 914121 - 915254 + | 8-amino-7-oxononanoate synthase TERM 1066 916906 - 916917 + gT 74 -4.4 -4.91511 | CATCCAAAGTTTTTG CAGA TACC TCTG TTTTTCTCATCAGCT CTA_0849 918078 - 917389 - | hypothetical protein TERM 1067 917706 - 917685 - GH 89 -7.4 -4.9448 | opp_overlap 917688 AGCGATTAAAGAAAA GAATCTCA TGTTCC TGAGATTC ATGGACAAAAATGCC CTA_0850 918234 - 918728 + | protein disulfide isomerase TERM 1068 918802 - 918765 - f 100 -9.9 -5.2015 | opp_overlap 918736 918788 918790 918794, overlap 918794 TTAATAAGAGAAAAA CGTGTTCCCATTCTCGG ATTT CCAAGAAAGAGAAAACG ACCCAGTTTTCTCTT TERM 1069 918788 - 918821 + F 85 -9.8 -4.07568 | opp_overlap 918765 918794, overlap 918790 918794 CATTCTCGGATTTCC AAGAAAGAGAAAAC GACCCA GTTTTCTCTTTCTA TTTTGGAGAAAGCAA TERM 1070 918790 - 918819 + F 90 -12.4 -3.63744 | opp_overlap 918765 918794, overlap 918788 918794 TTCTCGGATTTCCAA GAAAGAGAAAAC GACCCA GTTTTCTCTTTC TATTTTGGAGAAAGC TERM 1071 918794 - 918815 + F 78 -7.4 -4.45168 | opp_overlap 918765 918794, overlap 918790 918788 CGGATTTCCAAGAAA GAGAAAAC GACCCA GTTTTCTC TTTCTATTTTGGAGA TERM 1072 918815 - 918794 - f 73 -7.4 -4.16842 | opp_overlap 918790 918788 918794, overlap 918765 CGGATTTCCAAGAAA GAGAAAAC GACCCA GTTTTCTC TTTCTATTTTGGAGA TERM 1073 919734 - 919722 - g 77 -4.8 -5.00884 | ATTGCTTTGAAAAAA CTCC TTGTT GGAG GAATGTCCCGAGTTT TERM 1074 920487 - 920498 + G 70 -3.6 -4.76312 | overlap 920479 GACGCCGCATCCATT CGGG ATGT CCTG TTTTTCCCTGTTATG lysS 918960 - 920540 + | lysyl-tRNA synthetase TERM 1075 920558 - 920535 - T 85 -2.5 -5.69379 | opp_overlap 920552 ATAGAAGCAAAAAAA GATTAAAGT TTTTTC ACTTTCATC CCGGTTTTGCCATCT cysS 922030 - 920537 - | cysteinyl-tRNA synthetase TERM 1076 921014 - 920993 - G 73 -5.9 -4.56367 | CAGCCTACAAATAAA GTCTCTTAA GCGT TTAAGTGAC TGGCGAGAAGCATGC TERM 1077 921355 - 921372 + g 71 -8.5 -3.53563 | opp_overlap 921370 AATGCCATCCCGGGC GTCCTTT CCCA AAAGGAC TTTCCCAAAAAATCT CTA_0853 922285 - 923334 + | protein disulfide isomerase TERM 1078 923363 - 923391 + T 100 -11.1 -5.82388 | ATCTAGTATTCCTCC CCATTCCATGC CTCTATA GCGTGGAATGG TTTTTTTTAGGATTT rnpA 923774 - 923412 - | ribonuclease P rpmH 923924 - 923787 - | 50S ribosomal protein L34 TERM 1079 924228 - 924247 + H 71 -3.6 -4.94972 | AGAGAGCAGAGATCA CTGTAAGA AAAC TTTTACGG TTTTTAGTTGTGCTG rpmJ 924401 - 924538 + | 50S ribosomal protein L36 TERM 1080 924703 - 924689 - g 74 -6.4 -4.46976 | AGGAAGAAAGAGAAA GAGCTC GGG AAGCTC TCAATAAAATGAGAA rpsN 924562 - 924867 + | 30S ribosomal protein S14 TERM 1081 924880 - 924895 + T 100 -10.4 -5.56568 | TAGGACTTGTGTTGA GCCCCT TGAA AGGGGC TTTTTTTACTCGTCT CTA_0858 925401 - 924901 - | hypothetical protein TERM 1082 924991 - 925002 + g 73 -5.8 -4.57073 | TACCCATAATTCTTG GGGA TCGA TCCC TTTTTCAGGAGAGTG CTA_0859 925774 - 925523 - | hypothetical protein CTA_0860 926053 - 926547 + | hypothetical protein TERM 1083 926570 - 926545 - T 76 -9.1 -3.78234 | opp_overlap 926550, overlap 926550 ATTCAAACTGAAGAA TAAAAGGCTCT GTAT AGAGCCTTTTT TTGGTTAGGATCCTC TERM 1084 926550 - 926565 + T 100 -9 -5.63103 | opp_overlap 926545 926550 AACTGAAGAATAAAA GGCTCT GTAT AGAGCC TTTTTTTGGTTAGGA TERM 1085 926565 - 926550 - T 91 -9 -4.91987 | opp_overlap 926550, overlap 926545 AACTGAAGAATAAAA GGCTCT GTAT AGAGCC TTTTTTTGGTTAGGA uvrC 928388 - 926592 - | excinuclease ABC subunit C TERM 1086 928233 - 928284 + g 100 -9.1 -4.67234 | gap 1, overlap 928230 TAAAAAAGGGATGCG TTTACGGGAATCGCCTTTCTTT TGAAGATAT GAAGAAAGTCGATTCC-GTAAA TTTTTCGCCTTACCT mutS 930875 - 928413 - | DNA mismatch repair protein TERM 1087 929302 - 929269 - G 83 -11.9 -2.78816 | opp_overlap 929267 929266, overlap 929271 929275 929279 CGATGTTCTACGATA TAGAAACAAAGCTCC TTAA AGAGCTTGGTTTCTA AAGTTTGTAGCTTAT TERM 1088 929300 - 929271 - G 73 -10.1 -2.94218 | opp_overlap 929267 929266, overlap 929269 929275 929279 ATGTTCTACGATATA GAAACAAAGCTCC TTAA AGAGCTTGGTTTC TAAAGTTTGTAGCTT TERM 1089 929292 - 929279 - G 71 -4.5 -4.65722 | opp_overlap 929267 929266, overlap 929275 929271 929269 CGATATAGAAACAAA GCTCC TTAA AGAGC TTGGTTTCTAAAGTT TERM 1090 930319 - 930342 + g 91 -6.8 -5.52986 | ATACGTAAATGCTGT TGGAGTTGTT TAAT AACAGCTTCA TTTTTTTGATAAAAT CTA_0863 930938 - 931207 + | hypothetical protein dnaG 931209 - 932996 + | DNA primase CTA_0865 933081 - 933368 + | hypothetical protein TERM 1091 933391 - 933408 + F 100 -7.7 -6.02546 | opp_overlap 933391 TCAAGAGTCTATAGA CTGGGAA TTTC TTCCCGG TTTTTTTTAATTTAA CTA_0866 933495 - 933986 + | hypothetical protein TERM 1092 934037 - 934010 - T 100 -11.4 -5.61596 | opp_overlap 934011, overlap 934011 ACCTTTATAAAAAAA GGCCTTCTCTTT GTGA AAAGAGAAGGCT TTCTTTTTGTCTGGA TERM 1093 934011 - 934036 + T 100 -14.9 -5.01422 | opp_overlap 934010 934011 CCTTTATAAAAAAAG GCCTTCTCTTT GTGA AAAGAGAAGGC TTTCTTTTTGTCTGG TERM 1094 934036 - 934011 - T 100 -14.9 -3.95873 | opp_overlap 934011, overlap 934010 CCTTTATAAAAAAAG GCCTTCTCTTT GTGA AAAGAGAAGGC TTTCTTTTTGTCTGG glyQ 937079 - 934068 - | glycyl-tRNA synthetase TERM 1095 937180 - 937161 - H 75 -9.4 -3.28712 | opp_overlap 937160 937164, overlap 937164 CCGGGCTCTGCAGAA CAAGGATT AAGA AATCCTTG ATATTCCTAGAGGAA TERM 1096 937723 - 937751 + G 95 -12.6 -3.36327 | opp_overlap 937723 ATATATTGCGAGAAA GTTTTCCCAGGT AACAG ATCTGGGAAAAC TTCTAGATCCCATGG TERM 1097 937751 - 937723 - g 86 -10.4 -3.89055 | opp_overlap 937723 ATATATTGCGAGAAA GTTTTCCCAGGT AACAG ATCTGGGAAAAC TTCTAGATCCCATGG TERM 1098 937930 - 937963 + G 74 -4.7 -4.86773 | TGCTAGGATGAGTGG GAAGTTAAAAGCT ATTCTTCA AGCTATTAGCTTC TTTTTCATCATTTTC pgsA_2 937541 - 938149 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1099 938146 - 938125 - T 100 -14.5 -5.00895 | CTTATTACAGAAAAA TGACTCGCC GGAT GGCGAGTCA TAGGGAAGTTTATTG glgA 939580 - 938156 - | glycogen synthase TERM 1100 938465 - 938449 - G 76 -9.5 -3.56109 | CAAACATAGAAGGAA TGCAGAT CAT ATCTGCA GCGGCGAAAATTTGT rplY 940157 - 940714 + | 50S ribosomal protein L25/general stress protein Ctc pth 940722 - 941261 + | peptidyl-tRNA hydrolase TERM 1101 941673 - 941659 - g 73 -8.6 -3.6959 | opp_overlap 941659 941658 AGAGTATCATTTAAA CGAAGA TCT TCTTCG ATTCATGACTCTTAA rpsF 941399 - 941737 + | 30S ribosomal protein S6 rpsR 941754 - 941999 + | 30S ribosomal protein S18 rplI 942020 - 942523 + | 50S ribosomal protein L9 TERM 1102 942535 - 942565 + F 74 -5.5 -4.77908 | gap 1, overlap 942535 942538 942538 TTAAACTTTTTGTTT GTTGGGGGAAGAGA TTCT TTTCTTCCCC-ACC TCTTTTTTTTATTTT TERM 1103 942535 - 942567 + F 100 -3.4 -6.47325 | gap 1, overlap 942535 942538 942538 TTAAACTTTTTGTTT GTTG-GGGGAAGAGA TTCT TTTCTTCCCCACCTC TTTTTTTTATTTTTT TERM 1104 942538 - 942564 + F 71 -8.1 -3.41254 | gap 1, overlap 942535 942535 942538 AACTTTTTGTTTGTT G-GGGGAAGAGA TTCT TTTCTTCCCCAC CTCTTTTTTTTATTT TERM 1105 942886 - 942904 + G 77 -8.2 -4.05788 | opp_overlap 942889, overlap 942889 TGCAGGAGGGAGTAG TAATGCAG CAA CTGCATTG TTTGCTTTAAACCAA TERM 1106 942889 - 942901 + G 76 -7.7 -4.15396 | opp_overlap 942889, overlap 942886 AGGAGGGAGTAGTAA TGCAG CAA CTGCA TTGTTTGCTTTAAAC TERM 1107 942974 - 942987 + G 85 -2.3 -5.86976 | TTAGCCGAACAGCTT GGCGT GGAT ACTCC TTTTTTCTTTTCTAC ispE 942587 - 943453 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 1108 943722 - 943704 - T 75 -6.7 -4.50122 | opp_overlap 943703, overlap 943721 CGATAGAAAAAAACA GCTCTGC CCCCT ACAGAGC CCTTTTAAAGGGGGA CTA_0877 945108 - 943756 - | hypothetical protein TERM 1109 945272 - 945234 - R 76 -10.4 -2.62761 | opp_overlap 945231, overlap 945233 ATAAAGAAGCAAGAG GTTTTTCTCGGATGAGGA ACC TCTTCATCCGAGAAAATG TAAGTACAAGAATGT ptr 948157 - 945287 - | insulin-degrading enzyme TERM 1110 947195 - 947185 - G 70 -5.4 -4.53648 | TAGATAAAATAGAAA TCAG TGA CTGA GCCCATCCTTGTAAG plsB 949209 - 948214 - | glycerol-3-phosphate acyltransferase TERM 1111 948328 - 948318 - G 76 -6.8 -4.44667 | CTTCGGAAGAACAAA GCTC ATC GAGC AACAGTTCGTCTCCA TERM 1112 949072 - 949095 + g 75 -3.1 -5.08824 | gap 1, opp_overlap 949073, overlap 949073 949075 CCATTGAGAACAAAG AGCTTCCGCT TTCTC AGCGG-AGCA TTTTTTAGATGCAGC cafE 950760 - 949222 - | ribonuclease E TERM 1113 950127 - 950158 + g 74 -9.6 -3.32268 | opp_overlap 950126 950127 CTGGAGAATAAAATT TCTCTAGGATACTT TGCC AAGTATTCAAGAGA TTCTGAGCCTCGTTA TERM 1114 950506 - 950523 + g 78 -4.1 -5.11033 | opp_overlap 950505, overlap 950507 950521 TGCATCAGAATCTAT ATCGAAC ATCT GTTCGAA TTTTTTAGAATTCTC TERM 1115 950507 - 950522 + g 70 -7.6 -3.65535 | opp_overlap 950505, overlap 950506 950521 GCATCAGAATCTATA TCGAAC ATCT GTTCGA ATTTTTTAGAATTCT TERM 1116 950898 - 950874 - H 70 -2.9 -5.1101 | opp_overlap 950874 CGATTAGGTAAAAAA TTCTACAAAAA TGC TTGTTGTTGAA TAGTTTAATTTAGAA CTA_0881 951324 - 951635 + | hypothetical protein TERM 1117 951747 - 951786 + F 74 -8.6 -3.64716 | gap 1, opp_overlap 951760, overlap 951745 951749 951781 CCTGGTATACGTTTT CACTGCGA-AGAGAGGGGG TGT CCCCTTGTCTGTCGCGGTA TATTTTGGGGAGTCG TERM 1118 951749 - 951784 + F 83 -11.2 -3.40175 | gap 1, opp_overlap 951760, overlap 951747 951745 951781 TGGTATACGTTTTCA CTGCGA-AGAGAGGGGG TGT CCCCTTGTCTGTCGCGG TATATTTTGGGGAGT TERM 1119 951781 - 951819 + F 71 -8.2 -3.42395 | overlap 951749 951747 951745 GTCCCCTTGTCTGTC GCGGTATATTTTGGGGAG TCG TTCCACAAAATGCATCGC TCTTTGAATCCTGGG rpmF 951895 - 952074 + | 50S ribosomal protein L32 TERM 1120 952252 - 952293 + G 100 -9.3 -4.64844 | opp_overlap 952252, overlap 952254 CCACCAATTAATGAA TTCTCCGCTGTCTCGTTCC GTTC GGATCGTGACCGCAGAGGA TTTTGTCTCTATGGA TERM 1121 952293 - 952252 - g 76 -9.3 -3.46824 | opp_overlap 952252 952254 CCACCAATTAATGAA TTCTCCGCTGTCTCGTTCC GTTC GGATCGTGACCGCAGAGGA TTTTGTCTCTATGGA TERM 1122 952254 - 952291 + G 71 -9.7 -2.62187 | opp_overlap 952252, overlap 952252 ACCAATTAATGAATT CTCCGCTGTCTCGTTCC GTTC GGATCGTGACCGCAGAG GATTTTGTCTCTATG plsX 952097 - 953062 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 1123 953685 - 953707 + G 95 -7.8 -5.1615 | ACGAGCAGCAACCTT GATTCTCC TCGTGAC GGAGAATC TTTTTTAGGTATTGC TERM 1124 954433 - 954416 - g 87 -8.5 -4.57073 | opp_overlap 954405 CATTTTTGGCAAAAA TTGTCAG ATTT CTGACAA CGAGGGGCCAGTGGT TERM 1125 954860 - 954870 + G 73 -5.4 -4.64861 | opp_overlap 954860 GGAAATTACCAATAA TTCC GAA GGAA TTTCTTTTACAGGAA TERM 1126 955730 - 955740 + G 79 -6.8 -4.63542 | CTTCTCTGATATTTA TGGC GGC GCCA TTTTTACAGGTTCTC TERM 1127 957414 - 957433 + G 73 -3.5 -5.04325 | overlap 957417 GAATACCGAAGTTTA GTTGGTC CTGTGA GACCTAC TTTTTATGCTTTGCA TERM 1128 957547 - 957510 - g 84 -9.9 -3.88232 | opp_overlap 957521 GGCTTTACAGAACAA GGAAGAGAAGCGCGTTC TTTT GAAGACGCTTCCCTTAC CAATATCACCATTCC pmpD 953283 - 957878 + | polymorphic outer membrane protein TERM 1129 957910 - 957937 + F 100 -12.9 -5.90981 | ACAGCAACCATTCTA TCCCTAATCTC CCATCA GAGATTAGGGA TTTTTTTTACTCTGA TERM 1130 958011 - 958030 + F 85 -2.9 -5.81412 | AGTCAATAAGTTGAG GAGAAGA TAGAAT TTTTCTC TTTTTTTTCGCTAGG TERM 1131 958897 - 958881 - g 82 -2.2 -5.61881 | opp_overlap 958893, overlap 958883 958885 958893 TTCGAAAAAGAAAAA CATGGT ATCAA ACCAGG AAGACGTGGTTCGAT CTA_0885 958122 - 958916 + | hypothetical protein TERM 1132 958924 - 958938 + T 71 -4.3 -4.8487 | opp_overlap 958924 CGATATAGAAGAAGA CGAAT GTCTA ATTCG TTGTTTTTTTAATAG TERM 1133 958954 - 958984 + T 100 -5.5 -5.86332 | gap 1, opp_overlap 958956, overlap 958956 TTGTTTTTTTAATAG AAGCCTGG-CTTGT AGTA ATAAGACCAGGCTA TTTTTTTTGGATTCG TERM 1134 958956 - 958982 + T 86 -8.1 -4.56715 | gap 1, opp_overlap 958956, overlap 958954 GTTTTTTTAATAGAA GCCTGG-CTTGT AGTA ATAAGACCAGGC TATTTTTTTTGGATT CTA_0886 959353 - 959000 - | hypothetical protein CTA_0887 959682 - 959320 - | hypothetical protein TERM 1135 959483 - 959493 + gH 70 -2.6 -5.03314 | opp_overlap 959483 TTCTTGCGTAACCAA TTTA GAA TAAA TTTTTTCCCAATCAA TERM 1136 959707 - 959697 - H 100 -2.6 -6.4275 | opp_overlap 959697 TAAAAACAAAAAAAA TAAA TCA TTTA GTTTTCGATAATTAT TERM 1137 960188 - 960157 - g 72 -7.2 -4.04206 | opp_overlap 960147, overlap 960158 CTATGGGGATAGAAA CCCTGATGTTGGGA CCTA TCCCTACCCCAGGA GTGGCATTTATTACT mrsA_2 959928 - 961304 + | phosphoglucosamine mutase TERM 1138 962791 - 962774 - g 71 -4.2 -4.86613 | TAAAATTAAAAGAAA TTGCTT ACGTAG AAGCAA ATGCTTACCCTGCAG glmS 961315 - 963135 + | D-fructose-6-phosphate amidotransferase TERM 1139 963125 - 963144 + F 89 -6.5 -5.47431 | overlap 963130 TGGCTAAATCTGTTA CTGTAGA GTAAAA TCTACAG TTTTTTCTCTCTTGA TERM 1140 963635 - 963663 + G 83 -11.9 -2.6063 | overlap 963630 TAGTATTTTTTGCTT TGTTTTCCCCATT ATT AATGGCGAAAACA TCCATTATCGATCAA TERM 1141 963950 - 963964 + G 71 -5 -4.67607 | GGGAAGCCATTGTGT TAGGAG CCG TTCCTA TTTCTTTCTTAGAAC tyrP_1 963238 - 964434 + | tyrosine-specific transport protein TERM 1142 964456 - 964484 + F 81 -7.4 -4.83169 | CACTTCAAGTCTCAA GCTCGCATTCAG ATTTC CTTTATGCGAGC TTTTTGTAAACAGAT tyrP_2.1 964616 - 964873 + | tyrosine-specific transport protein TERM 1143 965518 - 965540 + G 80 -6.3 -4.78157 | GATATTTTTAAATGG GATGCTCGT AAGAA ACGGGTATC TTTGTTCTTTTTAGT typP_2.2 964858 - 965799 + | tyrosine-specific transport protein yccA 965841 - 966557 + | transporter TERM 1144 966619 - 966593 - T 100 -13.2 -5.86061 | opp_overlap 966593 TTCTAGGAAAAAAAA GAGGTATTTAGA GTT CCTAAATACCTC TTTTTTATGGGTGAA TERM 1145 966593 - 966619 + T 100 -12.5 -5.28176 | opp_overlap 966593 TTCTAGGAAAAAAAA GAGGTATTTAG AGTTC CTAAATACCTC TTTTTTATGGGTGAA ftsY 967509 - 966655 - | hypothetical protein TERM 1146 967339 - 967318 - G 71 -8.8 -3.32066 | opp_overlap 967322, overlap 967308 967322 AATAATCTTTGATAA GAAAGAGC GAATAA GCTCTTTC ACTGCCCGTTCATCA TERM 1147 968011 - 967995 - g 93 -10.1 -4.4017 | opp_overlap 967998 GGAAGTCGCAGAAAA GCAGCCG GAT CAGCTGC TTAAAATGACACTAC sucC 967579 - 968739 + | succinyl-CoA synthetase subunit beta sucD 968754 - 969629 + | succinyl-CoA synthetase subunit alpha TERM 1148 971067 - 971118 + G 84 -10.8 -3.66784 | gap 1 GGGATTCTGGTAGTT GCTGTGGAGGCAGGCTCGCCTGCAG CTT CTGCAGGCGTCGCT-CCTGGACAGC TTATCTTAGCGGTGA htrA 969768 - 971261 + | DO serine protease TERM 1149 971299 - 971314 + F 100 -9 -5.86061 | GCTAGTCTAGTATGG GGACTC AATC GAGTCC TTTTTTTTAATAAGA TERM 1150 972343 - 972357 + G 75 -8.6 -3.79071 | overlap 972338 TTCAATTTTTGATCA GCAAGA TCT TCTTGC TTTACATGTTCTGGA TERM 1151 973329 - 973293 - g 81 -11.8 -2.52464 | opp_overlap 973285, overlap 973297 973299 TCTCTTCTCAAGCTA CAGATACTGATCGA CTCTCACCC TCGATCAGTATCCG TGGTAAGGCTTTGAT CTA_0898 971459 - 974383 + | insulinase family metalloprotease CTA_0899 975680 - 974397 - | RmuC family protein pssA 976475 - 975684 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 1152 977615 - 977593 - g 72 -10 -2.89602 | opp_overlap 977596, overlap 977592 TGTGCGAGAGGAAAT CAATGCTTTG ACG CAAAACATTG TCGCGGAAATAGAAG nrdA 977111 - 980254 + | ribonucleotide-diphosphate reductase subunit alpha TERM 1153 980775 - 980756 - g 76 -9.4 -3.41936 | overlap 980754 GATTAAGGCCAAAGA TGATTTCC AGAT GGAAATCA CTGGCAAGGTATTGG TERM 1154 980963 - 980924 - g 81 -7.5 -4.60797 | gap 1, opp_overlap 980929, overlap 980957 CTTCCACAGACAAAA TAAGATG-ATTGGTATTG GAGAA CAATATCAATACATCTTA AGAGATGAGACAATC nrdB 980292 - 981332 + | ribonucleotide-diphosphate reductase subunit beta TERM 1155 981377 - 981356 - f 86 -10.9 -4.13711 | opp_overlap 981356 TCAAAATAGGAGAAA GCCTCAACC ATAG AGTTGAGGC TTTTTTTTGTCATAC TERM 1156 981356 - 981377 + F 100 -10.2 -5.9873 | opp_overlap 981356 TCAAAATAGGAGAAA GCCTCAAC CATAGA GTTGAGGC TTTTTTTTGTCATAC trmB 981592 - 982266 + | tRNA (guanine-N(7))-methyltransferase ygtB 982382 - 982966 + | SAM-dependent methyltransferase murB 983838 - 982963 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 1157 983870 - 983914 + r 100 -13.6 -3.3568 | gap 1, opp_overlap 983884, overlap 983899 AAGTTGACTGTTCAA GGGAAGCGACACAAGCCCAAG ATAT CTTGGACG-GAGTCGCTTCCC TTACTCTGTCATTCT TERM 1158 983901 - 983884 - R 70 -7.7 -3.55368 | opp_overlap 983870 983899 AGGGAAGCGACACAA GCCCAAG ATAT CTTGGAC GGAGTCGCTTCCCTT nusB 984477 - 983971 - | transcription antitermination protein NusB infC 984909 - 985436 + | translation initiation factor IF-3 rpmI 985447 - 985641 + | 50S ribosomal protein L35 TERM 1159 985694 - 985708 + G 72 -7.1 -4.07568 | CAGTAGCTTCTAGAT CGCGT CGTAA ACGCG TTTTAAAACAAGCAA rplT 985660 - 986031 + | 50S ribosomal protein L20 pheS 986038 - 987066 + | phenylalanyl-tRNA synthetase subunit alpha TERM 1160 987117 - 987107 - f 71 -6.8 -4.07885 | overlap 987094 987112 CACCTGTCTTGAAAA CAGG AGA CCTG AAAGGGTCCGGGGGT TERM 1161 987197 - 987209 + F 100 -5.5 -5.95946 | overlap 987170 987169 AGAGTTGAGGCTCTT CCTCT GAA AGGGG TTTTTTTGTTCTTAG TERM 1162 988238 - 988214 - g 70 -3.6 -4.86621 | overlap 988216 ATTTTGAATGAAAAA GATCTTCTTG ATTTA CAAGAAAAAC ATTCGAAATCACTAG CTA_0913 987377 - 989353 + | hypothetical protein CTA_0914 990450 - 989350 - | hypothetical protein CTA_0915 991517 - 990453 - | permease TERM 1163 991040 - 991062 + g 82 -3.4 -5.49579 | overlap 991043 TTTTCCCACAGTGAT CTATCGCA ATGAATA TGCGATCG TTTTCTTTTTTCTGC tilS 991615 - 992580 + | TilS TERM 1164 994487 - 994497 + G 74 -6.8 -4.32436 | overlap 994491 994494 GACAAGGCTTTATTG CGTC CAG GACG TTTTGATCGTCGTGT TERM 1165 994823 - 994791 - g 95 -5.5 -5.80817 | overlap 994796 CTCAAGAGAAAAAAA CAACGGCATACCACG AGT CAGGGCATGCTATTG TAGGGCTTTGTGTTG ftsH 992741 - 995482 + | hypothetical protein TERM 1166 995498 - 995521 + T 100 -6.7 -6.06529 | overlap 995500 CTTCCCTTCTGGAGG TAGAGCCCT TTTATT AGGGCTCTC TTTTTTTTGTGTGTG TERM 1167 995500 - 995519 + T 88 -9.3 -4.65669 | overlap 995498 TCCCTTCTGGAGGTA GAGCCCT TTTATT AGGGCTC TCTTTTTTTTGTGTG TERM 1168 995660 - 995637 - T 100 -12.6 -5.64304 | opp_overlap 995637 CAAGACAATAAAAAA GGCTAAGAAA AACC TTTCTTAGCC TTGTTTCTCAACGAA TERM 1169 995637 - 995660 + T 100 -12.6 -4.06419 | opp_overlap 995637 CAAGACAATAAAAAA GGCTAAGAAA AACC TTTCTTAGCC TTGTTTCTCAACGAA pnp 997777 - 995690 - | polynucleotide phosphorylase/polyadenylase TERM 1170 995775 - 995793 + g 71 -8.2 -3.42297 | overlap 995774 995778 995780 GCAAGCTTGTCTCCT TCTTTGAC AAA GTCAGAGA TATTGTCTACTTTTT TERM 1171 997579 - 997553 - G 78 -8.7 -3.86897 | opp_overlap 997560 997563 997575 TTCACGTTTTAGAAA TCCTCCAGAGG TTCTT CCTGCGGAGGA AAACTTCTCTTGATA rpsO 998075 - 997806 - | 30S ribosomal protein S15 yfhC 998301 - 998792 + | tRNA-specific adenosine deaminase CTA_0921 998824 - 999042 + | hypothetical protein CTA_0922 999718 - 999014 - | hypothetical protein TERM 1172 999815 - 999850 + r 80 -11.2 -3.13403 | overlap 999815 TCTCGCAAAGTTTGT TATTTGGGTGCATAGG AAAA CCTGTGCACCCCAAGA TATTAGTCCGAAGGA CTA_0923 1000371 - 999853 - | hypothetical protein TERM 1173 999947 - 999969 + g 74 -4.8 -4.90013 | overlap 999966 AGAATTTTCATAGAT TCTGTGGATG TGG CGTTCACCGA TTTTTGGTTAGCTTG CTA_0924 1000893 - 1000387 - | hypothetical protein CTA_0925 1001400 - 1000921 - | hypothetical protein TERM 1174 1001404 - 1001420 + H 100 -4.5 -6.28401 | TGCTGCTGACATATT CTAAAAA ATT TTTTTGG TTTTTTTATTTTTTA TERM 1175 1001658 - 1001681 + H 81 -10.4 -3.40597 | overlap 1001656 ATCAAGTGTTTAAGG TTTTTCGCAG AAGG CTGCGAGAAA TGTTTAAATGAAACC CTA_0926 1001719 - 1001907 + | hypothetical protein TERM 1176 1002722 - 1002708 - g 73 -5.7 -4.4261 | CTGTGAAGAGGAAAA TAGCG GGAAG CGCTA TGCTGAGGAGTGCTT TERM 1177 1002977 - 1002955 - g 70 -2.7 -5.00616 | gap 1, opp_overlap 1002959 TCCTTTCTGAAAAAA GCT-AGACGC GAAC GCTTCTTAGC TCAAGAGCAACTTTT CTA_0927 1001926 - 1003143 + | hypothetical protein map 1003975 - 1003100 - | methionine aminopeptidase TERM 1178 1003200 - 1003228 + g 74 -6.1 -4.42464 | overlap 1003203 1003204 CATGTTCGTGCCTCC CAATGGTTTATTG GGT CAATAAACCCTTC TTTCTTTCCGACATT TERM 1179 1003203 - 1003225 + g 79 -7.8 -4.32678 | overlap 1003200 1003204 GTTCGTGCCTCCCAA TGGTTTATTG GGT CAATAAACCC TTCTTTCTTTCCGAC TERM 1180 1003204 - 1003224 + g 84 -11.3 -3.18884 | overlap 1003203 1003200 TTCGTGCCTCCCAAT GGTTTATTG GGT CAATAAACC CTTCTTTCTTTCCGA yghN 1004647 - 1004033 - | YghN family protein CTA_0930 1005264 - 1004665 - | hypothetical protein CTA_0931 1007228 - 1005459 - | ABC transporter permease protein TERM 1181 1006462 - 1006483 + g 71 -2.3 -5.1925 | overlap 1006458 1006463 1006478 GCAAAGACCCATTTT TTCCCAAAA GATC TTTTGGAAG TTTTTTCCATTCTAA TERM 1182 1007180 - 1007149 - G 76 -6.6 -4.41177 | overlap 1007143 1007142 CATATAAAGCCAAAA CTCGGATAGTTTTG AGCA CAAAACTCCCAGAG TCCAATCAAGGGAAG TERM 1183 1007858 - 1007871 + G 70 -5.3 -4.45485 | opp_overlap 1007858 ATGCAGTTCCAATGA CTCTT GGGC AAGAG TTTTCTGGGTATAGT fumC 1007281 - 1008672 + | fumarate hydratase ychM 1010456 - 1008753 - | sulfate transporter TERM 1184 1010270 - 1010253 - G 73 -5.5 -4.64766 | overlap 1010242 GGCAGAGGCTAAAAA GCCTCCA ATAA TTGAGGC CAATAGTCCTTGTAA CTA_0934 1010973 - 1010644 - | hypothetical protein TERM 1185 1011388 - 1011402 + G 85 -5.7 -5.14819 | overlap 1011370 GAAGCGTGCTGCTTT GGGTA TTACT TACCC TTTCTTTTTTCCTTT TERM 1186 1011810 - 1011820 + G 74 -6.8 -4.39002 | overlap 1011816 TGGAAAGCTGTATTA GGAG TTC CTCC TTTTATGGGGGCTTT CTA_0935 1011087 - 1012352 + | Na+/H+ antiporter TERM 1187 1012560 - 1012572 + G 70 -2.7 -5.03747 | overlap 1012561 TTTGCAAGAATGCTC TTCAA GAT TTGAG TTTTTTAGAGCATTT TERM 1188 1012658 - 1012676 + G 72 -9.6 -3.14132 | CTTGTTCAAAGCTCC GTTTCTGC ACA GCAGAAGC TTCGTACACAAGAAA TERM 1189 1012955 - 1012974 + G 78 -10 -3.54307 | opp_overlap 1012938 AATCACAAAGGGACT GCAGCTGA AGAG TCGGCTGC TTTAAGAACACTATT TERM 1190 1013436 - 1013414 - g 83 -9.2 -3.9777 | opp_overlap 1013413 GGTAAGAGCCATAAA GTAGGATTTC TAA GAATTCCTAC ATATAGTTGGCAGGA TERM 1191 1013912 - 1013932 + G 74 -4.7 -4.81212 | overlap 1013924 TCTAAACCGATTTGT GTTTTGATC AAT GAGCAAGAC TTTTCTTGTGCTGAC TERM 1192 1014145 - 1014178 + G 76 -10.5 -3.06087 | gap 1 ACCGCATATCGATCT GCCTTTTACAGCGAAT GAT ATTCGCTATA-AAGGC TATTCCGAGTATCTT cpa 1012466 - 1014271 + | periplasmic protease TERM 1193 1014298 - 1014327 + F 83 -10.1 -4.03586 | gap 1, opp_overlap 1014297 GTTCATAGTAAGAGG GGGCTTTGCGGATT TAT GGTCC-CAAAGCCC TTGTTGTATTTAAAC ispH 1014366 - 1015289 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 1194 1015322 - 1015298 - T 95 -13 -3.63046 | opp_overlap 1015296 1015295 ATTATAATTAGAGAA GTCAGATGAG TTTAT CTCATCTGAC GGAATTTTTCTCACT CTA_0938 1016822 - 1015341 - | hypothetical protein TERM 1195 1016111 - 1016122 + g 71 -4.4 -4.87389 | overlap 1016110 CGTGTAAGAGTCCTT CTCT CGCG AGAG TTTCTTTTTGGGCTG TERM 1196 1016689 - 1016712 + g 81 -11.1 -3.34468 | opp_overlap 1016687, overlap 1016687 1016685 AGGCTCCGAAGGATT GCTGCTTGA CCTGGT TCAAGCAGC TGTATTTCATTGGAG TERM 1197 1016720 - 1016770 + g 73 -9 -3.52162 | overlap 1016724 1016725 CAAGCAGCTGTATTT CATTGGAGAGGGCAGAGGCTTCTT CAC AAGAAGTCTCTACCTGCTCTCCTG TTGCTATTGTTTGTA TERM 1198 1016724 - 1016768 + g 95 -12.4 -3.31565 | gap 2, overlap 1016720 1016725 CAGCTGTATTTCATT GGAGAG--GGCAGAGGCTTCTT CAC AAGAAGTCTCTACCTGCTCTCC TGTTGCTATTGTTTG TERM 1199 1016725 - 1016765 + g 95 -14.1 -2.81181 | overlap 1016724 1016720 AGCTGTATTTCATTG GAGAGGGCAGAGGCTTCTT CAC AAGAAGTCTCTACCTGCTC TCCTGTTGCTATTGT CTA_0939 1018354 - 1016834 - | hypothetical protein TERM 1200 1016976 - 1016991 + g 70 -7.6 -3.6502 | opp_overlap 1016976 1016975 TCCCAATTTATTAAT TCGATG CGTG CATCGA TTTGAGTACAGCATG TERM 1201 1017544 - 1017556 + g 70 -7.7 -3.72893 | opp_overlap 1017530 AGGCAGAAAAATCTG CAAGG ATA CCTTG TTTAGTGAGAAGGTA lcrH_2 1018977 - 1018381 - | type III secretion chaperone CTA_0941 1020347 - 1018899 - | hypothetical protein TERM 1202 1019100 - 1019126 + gH 73 -2.9 -5.17576 | overlap 1019101 TTCCTCAGACCAGTC GTAGGAGTCTC CAATT GGGACGCCTAG TTTTTTAGCTTGATC TERM 1203 1019697 - 1019682 - GH 91 -7.6 -4.77165 | TGTTTGAGAAGAAAA TTCCCA TTCC TGGGAA GAAAGTTGAGCCGTT CTA_0943 1020906 - 1021211 + | hypothetical protein xerD 1022110 - 1021208 - | site-specific tyrosine recombinase XerD TERM 1204 1021456 - 1021493 + g 100 -4.9 -6.50115 | AACGATCGAGTTTTT TCCCTCTGATAGACA AAAATACA TGTTCTTCAGAGGGA TTTTTTTTTTGTAAT TERM 1205 1022632 - 1022648 + G 86 -8 -4.68512 | TATACGCGTTCTATA GCGGAT TTGCC ATCCGC TTCTTTTTATTCTGG TERM 1206 1022739 - 1022725 - g 74 -4.3 -4.9645 | opp_overlap 1022725 1022720, overlap 1022720 ATTAGAAGAAGAAAA GATCT TAAAG AGATC CTTCCTTTCCTATTC TERM 1207 1022988 - 1023031 + G 78 -5.5 -5.06414 | gap 2, overlap 1022990 AGGGAATGAGGCTGT TCCTTTTTCATTACTGAGAGC TGCA GCTCTCAGT-ATGC-GGAGGA TTTTTATTCAAGAGA CTA_0945 1022359 - 1023348 + | hypothetical protein TERM 1208 1024168 - 1024139 - g 100 -15.2 -2.72558 | opp_overlap 1024141 1024143 1024145, overlap 1024141 1024143 1024145 ACAACCTTTGAATTA TAGAGAGCTAGC AGATCA GCTAGCTCTCTA TTGCAAGCAGATGCA TERM 1209 1024166 - 1024141 - g 100 -13.4 -2.90571 | opp_overlap 1024141 1024143 1024145, overlap 1024139 1024143 1024145 AACCTTTGAATTATA GAGAGCTAGC AGATCA GCTAGCTCTC TATTGCAAGCAGATG TERM 1210 1024141 - 1024166 + G 100 -13.4 -3.01924 | opp_overlap 1024141 1024139 1024143 1024145, overlap 1024143 1024145 AACCTTTGAATTATA GAGAGCTAGC AGATCA GCTAGCTCTC TATTGCAAGCAGATG TERM 1211 1024143 - 1024164 + G 76 -10.2 -3.06696 | opp_overlap 1024141 1024139 1024143 1024145, overlap 1024141 1024145 CCTTTGAATTATAGA GAGCTAGC AGATCA GCTAGCTC TCTATTGCAAGCAGA TERM 1212 1024164 - 1024143 - g 76 -10.2 -3.00298 | opp_overlap 1024143 1024141 1024145, overlap 1024141 1024139 1024145 CCTTTGAATTATAGA GAGCTAGC AGATCA GCTAGCTC TCTATTGCAAGCAGA TERM 1213 1024332 - 1024313 - g 79 -10.8 -2.9039 | opp_overlap 1024307, overlap 1024315 ACAGTATTTTATAGA TACCATGC ATCA GCATGGTA TCGGGGTGATTTTAG glgB 1023363 - 1025579 + | glycogen branching enzyme CTA_0947 1026609 - 1025590 - | hypothetical protein TERM 1214 1026678 - 1026640 - R 72 -7 -4.03204 | opp_overlap 1026643, overlap 1026636 1026643 TATTAAACGGACAAA TAATTATATCTGAAAAAT GGG ATTTTCCAGTTAAAATTA ATCAAAAACAAACGT TERM 1215 1026693 - 1026703 + r 73 -2.6 -5.24551 | opp_overlap 1026693 AATCAAAAACAAACG TTTT ATA AAAA TTTTTATTAATTTCA TERM 1216 1026800 - 1026775 - R 79 -7.5 -4.26924 | opp_overlap 1026777 1026779, overlap 1026772 1026777 AATAGTAAGAAATAA GAGCGGCCATC TCTC GATGGCCTCTT ATTTAAAAAGATTTT TERM 1217 1026798 - 1026777 - R 81 -10.1 -3.71448 | opp_overlap 1026777 1026779, overlap 1026775 1026772 TAGTAAGAAATAAGA GCGGCCATC TCTC GATGGCCTC TTATTTAAAAAGATT TERM 1218 1026777 - 1026798 + r 83 -10.1 -3.91488 | opp_overlap 1026777 1026775 1026772, overlap 1026779 TAGTAAGAAATAAGA GCGGCCATC TCTC GATGGCCTC TTATTTAAAAAGATT TERM 1219 1026779 - 1026796 + r 83 -11.3 -3.54488 | opp_overlap 1026777 1026775 1026772, overlap 1026777 GTAAGAAATAAGAGC GGCCATC TCTC GATGGCC TCTTATTTAAAAAGA CTA_0948 1028076 - 1026820 - | hypothetical protein TERM 1220 1028243 - 1028230 - R 82 -9.5 -4.06384 | opp_overlap 1028230 1028226 CGGGAAGAGGATAAA GGGGC CGGA GCCCC CTCTATTACTCTAGA pmpE 1031142 - 1028254 - | polymorphic outer membrane protein TERM 1221 1028518 - 1028538 + g 73 -8.3 -3.65902 | GGCTTGAGGTCTTTG GGTAGCATT CAT AAAGCTACC TTTAACTCCAATAGG TERM 1222 1030917 - 1030931 + g 80 -3.5 -5.26316 | TTATTGTGACAGCAG CTCCT TCATT GGGAG TTTTTTGTAGAATAG TERM 1223 1031140 - 1031125 - G 77 -4.8 -4.93365 | TCCGATAAGGAAAAA GAAAAA CGCT TTTTTC ATAATTAAAAGACCA pmpF 1034249 - 1031145 - | polymorphic outer membrane protein pmpG 1034416 - 1037457 + | polymorphic outer membrane protein TERM 1224 1038249 - 1038235 - g 80 -11.4 -2.64877 | opp_overlap 1038231, overlap 1038231 TTCACAGATAACGTA GCCTCC TGT GGAGGC GGAGTAGTCTACAAA TERM 1225 1039468 - 1039490 + G 70 -9.2 -2.81464 | opp_overlap 1039466 1039465 GATTGGACGAAACCT CCCTTAGC TCCTGAT GCTAAGGG TATGGTGCCTCCTAA pmpH 1037488 - 1040544 + | polymorphic outer membrane protein TERM 1226 1040537 - 1040550 + F 79 -3.9 -5.45802 | opp_overlap 1040537 TGGGCTTGAATAGAA TCTTT TAAT AAAGA TTTTTCTTTTCAGAA TERM 1227 1040687 - 1040723 + F 93 -3.7 -5.86061 | opp_overlap 1040666 CTAGAATTTTAGAGA GCAGGATCTTTTGTTTG ATT CAAACAAAAGGATGAGC TTTTTTTTCATAAAA CTA_0953 1040959 - 1041453 + | hypothetical protein TERM 1228 1041516 - 1041481 - T 100 -12.8 -5.94713 | opp_overlap 1041487, overlap 1041482 ACGTGAGAAAAAAAA TGAAAAGTCTTAGAGA GAGA TCCCTAAGACTTTTCT CAAGCTCTAAAACGC TERM 1229 1041515 - 1041482 - T 100 -16.3 -4.15201 | opp_overlap 1041487, overlap 1041481 CGTGAGAAAAAAAAT GAAAAGTCTTAGAGA GAGA TCCCTAAGACTTTTC TCAAGCTCTAAAACG TERM 1230 1041487 - 1041510 + T 83 -8.2 -4.39426 | opp_overlap 1041482 1041481 GAAAAAAAATGAAAA GTCTTAGAGA GAGA TCCCTAAGAC TTTTCTCAAGCTCTA pmpI 1044185 - 1041549 - | polymorphic outer membrane protein TERM 1231 1042735 - 1042750 + g 75 -3.2 -5.14477 | ATAGAAAGGTTAGGG GCGTGG ATAG TTACGC TTTTTTCAGTATCTA SEQUENCE gi|76789623|ref|NC_007430.1| Chlamydia trachomatis A/HAR-13 plasmid pCTA, complete sequence (length 7510) pCTA_0001 942 - 25 - | virulence plasmid integrase pGP7-D TERM 1 177 - 191 + g 80 -2.8 -5.50723 | opp_overlap 177, overlap 178 AAGCGCTTGCACGAA GTACTC TGG GAGTAA TTTTTATTTTCATAG TERM 2 665 - 655 - G 74 -4 -5.00642 | CAATCTATACAAAAA CTTT GTG AAAG ATATGTAGCATGCCG TERM 3 1170 - 1190 + r 78 -6.9 -4.41047 | opp_overlap 1170 1169 1172 AATAAATATATATAT GAGCTGA CGGAGGA TCAGCTC TTTTGCTTAAAAAGT pCTA_0002 1927 - 1184 - | virulence plasmid protein pGP6-D pCTA_0003 2655 - 1924 - | virulence plasmid ParA family protein pGP5-D pCTA_0004 3054 - 2746 - | virulence plasmid protein pGP4-D pCTA_0005 3918 - 3124 - | virulence plasmid protein pGP3-D TERM 4 3436 - 3446 + g 71 -6.8 -4.24204 | opp_overlap 3436 3435 TGAGACTAAGAACAT GCTC CCA GAGC TTTTGGGTGTGACTG TERM 5 3496 - 3533 + g 74 -5 -4.75219 | gap 1, overlap 3486 TCCTCCTAATAAAGT TTCAATGCTACTGGG AGTGAATAA CCC-GTTGCATTGAA TTTTATTAGTGATTG pCTA_0006 5044 - 3980 - | virulence plasmid protein pGP2-D TERM 6 4352 - 4368 + g 84 -3.7 -5.48514 | overlap 4341 GTAAGCATACTTTGA TGCATTT GGG AAACGCA TTTTTATTTCTTGGT dnaB_2 6393 - 5038 - | replicative DNA helicase pCTA_0008 6492 - 7484 + | virulence plasmid integrase pGP8-D