TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.593904 %AT, 979811 nt, 7107 terms. Intergenic: 0.645511 %AT, H2T: 137611 nt, 868 terms; T2T: 35527 nt, 510 terms; H2H: 53008 nt, 701 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|62184647|ref|NC_004552.2| Chlamydophila abortus S26/3, complete genome (length 1144377) hemB 148 - 1143 + | delta-aminolevulinic acid dehydratase CAB002 2577 - 1159 - | Na(+)-translocating NADH-quinone reductase subunit A TERM 1 1453 - 1464 + g 75 -3 -5.26119 | GTTGGTATCCGGATC CATA TATG TATG TTTTCTTTTTAAAAA CAB003 3034 - 2600 - | hypothetical protein TERM 2 2714 - 2724 + g 85 -5.4 -5.19003 | GGTCACTTCACTAAT CAGA GCT TCTG TTTCTTTTTTATATT TERM 3 4106 - 4095 - g 73 -5.8 -4.57304 | AGTGAATTAAAGAAA CCTG AAAA CAGG GAAATCATACTGAAG TERM 4 4287 - 4300 + G 76 -6.7 -4.33755 | GACATTTCTATAGCC GCCTT ACAG AAGGC TTTCTTAATGTTAAT TERM 5 4383 - 4396 + G 73 -6.7 -4.1964 | overlap 4380 ACAACGTTTCCAGCC CTCAG AGAG CTGAG TTTTAAAGTATTAAA TERM 6 4482 - 4499 + G 70 -2.7 -5.10208 | CATCCTATGATGTAT CCAGA GGTTTTTG TCTGG TTTTTCTTAAAGTTC TERM 7 4829 - 4817 - g 72 -3.3 -5.08601 | TGATCTGAAGAAAAA CACTG TAG CTGTG AAAGAAGATATTCTT CAB004 3147 - 5300 + | fused transcript cleavage factor/uncharacterized domain-containing protein TERM 8 6465 - 6481 + G 83 -5.1 -5.26875 | ATTCTTTTGATTTTA TCCTATC TCA GAAAGGA TTTTTTGGTTACCCA CAB005 5450 - 6643 + | aromatic amino acid aminotransferase TERM 9 6701 - 6725 + F 88 -8 -4.87893 | gap 1, opp_overlap 6703, overlap 6702 6703 ATCTACTCATAATGA TA-GCGCAGAT GCAT ATCTGCGCGTA TTTTTCATTCACATT TERM 10 6702 - 6723 + F 81 -8.7 -4.05402 | opp_overlap 6703, overlap 6701 6703 TCTACTCATAATGAT AGCGCAGAT GCAT ATCTGCGCG TATTTTTCATTCACA TERM 11 6703 - 6722 + F 85 -12.2 -3.02518 | opp_overlap 6703, overlap 6702 6701 CTACTCATAATGATA GCGCAGAT GCAT ATCTGCGC GTATTTTTCATTCAC TERM 12 6722 - 6703 - f 85 -12.2 -2.97245 | opp_overlap 6703 6702 6701 CTACTCATAATGATA GCGCAGAT GCAT ATCTGCGC GTATTTTTCATTCAC TERM 13 7271 - 7286 + G 83 -9 -3.97307 | TGATTTACCGAGATC CTTCCC ACTG GGGAAG TTCTTGTTGGGTAGA TERM 14 7353 - 7332 - g 84 -2.2 -5.80248 | opp_overlap 7332 7342 TAACATACAAAAAAA CTCCTCAG TACTTT CTGGGAAG GTTCTTATCGGTCTT CAB006 6841 - 7944 + | hypothetical protein CAB007 11041 - 7904 - | putative UvrD/REP helicase TERM 15 9016 - 8994 - G 74 -9.3 -3.61398 | overlap 8997 GTGTCTTCGGAATAA GAAGAAAAC GACAG GTTTTCTTC CCAACGTCCCGTTTC TERM 16 9127 - 9138 + g 75 -5.8 -4.73388 | overlap 9126 CTTGGAAAGTCAGGT CTCC TTGA GGAG TTTTTAGTAAAGCTT TERM 17 9873 - 9858 - G 82 -6.2 -4.90455 | opp_overlap 9816 9857 9858 9860, overlap 9815 AGAGATCCAGAAAAA TCTTTG TGCG CAAAGA GTTTGGCAAAAATAT TERM 18 10028 - 10043 + g 72 -3.2 -5.09225 | TTCATCTGGAGATAG CCACCA AGTG TAGTGG TTTTTTAAATACACT CAB008 14096 - 11028 - | hypothetical protein TERM 19 11446 - 11456 + gH 78 -4 -5.18643 | ATGTCAGCAGGGTTC TCTA GAA TAGA TTTTGTTTTCCTTAC TERM 20 13334 - 13310 - GH 100 -12.9 -3.86897 | opp_overlap 13312 GCGATTTGTGAGAAA GATTGGCAAGC AAG GCTTGCCTATC CGTTAAAACATAGTG TERM 21 13312 - 13332 + gH 73 -9.7 -2.52896 | opp_overlap 13310 GATTTGTGAGAAAGA TTGGCAAGC AAG GCTTGCCTA TCCGTTAAAACATAG TERM 22 14190 - 14213 + Gr 72 -8.3 -3.53444 | opp_overlap 14179 TAAGTTTCTTTTAGT CTTTTTCCT GCTTGA AGGAAAAAG TTTAACAGAGAATGC CAB009 14095 - 15807 + | hypothetical protein CAB010 16812 - 15832 - | hypothetical protein TERM 23 16243 - 16229 - G 73 -7.2 -4.09243 | TACACTTCTTTAAAA CCTTTT TCT AAAAGG AGGGAAGAGTACAAT rpsD 17032 - 17661 + | 30S ribosomal protein S4 TERM 24 17676 - 17664 - T 78 -6.3 -4.76963 | overlap 17659 TCATAGAACATAAAA GAAAG TTT CTTTC TTCCAAAAAGAGAGG TERM 25 17685 - 17724 + T 81 -2.9 -5.72622 | opp_overlap 17688 17690 17691, overlap 17691 TTCTTTCTTCCAAAA AGAGAGGCGTCAACTAT TCTTTT ATAGTTGGCGCTTTTGG TTTTTTATTTCTGAA TERM 26 17691 - 17718 + T 100 -10.7 -4.9251 | opp_overlap 17691 17690 17688, overlap 17685 CTTCCAAAAAGAGAG GCGTCAACTAT TCTTTT ATAGTTGGCGC TTTTGGTTTTTTATT CAB012 18598 - 17729 - | endonuclease IV TERM 27 17870 - 17896 + g 82 -8.6 -4.25104 | overlap 17872 17891 CCCTATATCTCCTTC CCCAAGGGGCGC GTG GCGATCCTTGTG TTTTCCTAGAGGAAA TERM 28 17872 - 17894 + g 79 -9.8 -3.73042 | overlap 17870 17891 CTATATCTCCTTCCC CAAGGGGCGC GTG GCGATCCTTG TGTTTTCCTAGAGGA TERM 29 18304 - 18321 + g 78 -4.1 -5.28826 | AATCTTGGATCTCTT GCTGTAT ACAG ATGCGGC TTTTTTCTAGGATTT TERM 30 18855 - 18845 - g 81 -5.4 -5.06414 | TCTTTTTAAGAAAAA TCCT CGG AGGA CCCGTTTTAGGGCTA TERM 31 20137 - 20150 + G 79 -3.1 -5.36441 | gap 1 TTGTCATCTTTTGTA GC-GCA AAG TGCCGC TTTTTTCTCTGAAAG CAB013 18664 - 20307 + | hypothetical protein TERM 32 21185 - 21165 - g 81 -7.5 -4.59109 | overlap 21146 21170 CAGACCCTGCAAAAA CAGCAGCAG GAC CTGTCGCTG CAAATCTGAAATATA TERM 33 21582 - 21594 + G 74 -6.3 -4.32857 | ATCTGTTTATGTATG GAATC ACA GATTC TTTATCTTTCAGAGC CAB014 20414 - 21700 + | hypothetical protein TERM 34 21730 - 21756 + F 100 -7.4 -6.38655 | opp_overlap 21730 AAATCTTTAAAAAGG GCTCATATCT AATTAAA AGATGTGAGC TTTTTTTTTATCTTT TERM 35 22395 - 22382 - g 77 -8.1 -4.27467 | opp_overlap 22380 22382 GTAGAAGTTAACAAA GCTGC TGCG GCAGC TCTTATTGAAGAGTT CAB015 21806 - 23725 + | hypothetical protein TERM 36 23764 - 23788 + T 100 -11.5 -5.71983 | opp_overlap 23764 23763 AGACTGCTTCAAAAG CCTGTTCTGTA TGG TGCAGAGCAGG TTTTTTTATGCTTAG TERM 37 23875 - 23902 + T 88 -12.8 -3.11173 | opp_overlap 23875 23878, overlap 23875 23878 23883 GGAATATGGGAAAAA GAAGGGAACTTC TTCT GAAGTTCCCTAC TTCAATAAGTTATCT TERM 38 23902 - 23875 - T 100 -12.8 -4.66953 | opp_overlap 23875 23875 23878 23883, overlap 23878 GGAATATGGGAAAAA GAAGGGAACTTC TTCT GAAGTTCCCTAC TTCAATAAGTTATCT TERM 39 23878 - 23899 + T 90 -13.1 -2.76189 | opp_overlap 23875 23878, overlap 23875 23875 23883 ATATGGGAAAAAGAA GGGAACTTC TTCT GAAGTTCCC TACTTCAATAAGTTA TERM 40 23899 - 23878 - T 100 -13.1 -4.43351 | opp_overlap 23875 23878 23875 23883, overlap 23875 ATATGGGAAAAAGAA GGGAACTTC TTCT GAAGTTCCC TACTTCAATAAGTTA CAB016 26516 - 23916 - | hypothetical protein TERM 41 25715 - 25731 + g 83 -9.5 -3.86653 | GTAGCATGAGCATCC CATTCAC ATT GTGAATG TTGTCTTTAGTCGGT TERM 42 25815 - 25833 + g 73 -7.4 -4.11216 | TCCACCAATGGTAGA GCGGTACG TCA TGTACTGC TTTTCAACATGAGCA TERM 43 26516 - 26540 + g 78 -3.8 -5.33124 | TATAAAAAGAAGACA TAGAAATTAT TTTTT ATAATTTTTA TTTTATTTTCTTATT TERM 44 26575 - 26585 + H 70 -2.6 -5.22006 | AAACTTTTTTTCTAT TAAA TTT TTTA TTTTTCTTATAGTCC TERM 45 26609 - 26627 + H 78 -5.4 -4.96773 | overlap 26611 ATAGTCCTGTTATTT TTGTTTTT AAG AAAAACGA TTTATTTTTGATTAA TERM 46 27638 - 27620 - g 83 -6.1 -5.15167 | TACGACCAAGAAAAA TTTGATC TTATC GATCAAA TCGGAGACGAATTAG CAB017 26660 - 29317 + | hypothetical protein CAB018 29348 - 29578 + | hypothetical protein CAB019 30297 - 29575 - | putative ABC transporter ATP-binding protein dsk1 30790 - 30305 - | putative lipoprotein kdsA 31596 - 30787 - | 2-dehydro-3-deoxyphosphooctonate aldolase CAB022 32277 - 32041 - | hypothetical protein rluD 33373 - 32396 - | putative pseudouridine synthase TERM 47 33150 - 33160 + g 81 -5.4 -5.11063 | TCGGGTAACAGTTCT GAAG GCT CTTC TTTTTCTTCAATAGT CAB024 33880 - 33572 - | hypothetical protein CAB025 34175 - 33882 - | hypothetical protein CAB026 35727 - 34288 - | DNA topoisomerase IV subunit A TERM 48 34417 - 34449 + g 79 -3.3 -5.47431 | overlap 34407 34420 GATGGTGAACTTTTT CATGTTGCTGAGATC TTT GTTTACAGCAGCTTG TTTTTTCTCTATTGC gyrB_2 37539 - 35731 - | DNA topoisomerase IV subunit B TERM 49 36153 - 36175 + g 76 -3.4 -5.31877 | opp_overlap 36158, overlap 36156 36158 CAAGGATGATTTTGT TATAACGCAA GTG TTGCGTGCTA TTTTTTGTAATACCT TERM 50 36814 - 36803 - G 89 -4.4 -5.62288 | TTAACAAAAGAAAAA TACC GCTC GGTA TGCGTGTCTAAATGT TERM 51 37529 - 37540 + g 75 -3 -5.21506 | ACACTAGCTTCAGTA TATG TTGC CATA TTTTTCTATTCTTCT hemA 38121 - 39137 + | glutamyl-tRNA reductase CAB029 39246 - 39389 + | hypothetical protein CAB030 39486 - 39887 + | hypothetical protein CAB031 39907 - 42288 + | hypothetical protein CAB032 42314 - 42595 + | hypothetical protein CAB033 42611 - 42865 + | hypothetical protein CAB034 42884 - 43333 + | hypothetical protein TERM 52 43444 - 43429 - g 71 -7.6 -3.88703 | opp_overlap 43429 43428, overlap 43427 TCCGAGAAAGAAACA GCTTCT ATAC AGAAGC CTTTAGGAACTCCTT CAB035 43378 - 44046 + | hypothetical protein TERM 53 45163 - 45147 - g 73 -9.5 -3.2614 | opp_overlap 45131 GATTGCTGACAGCAA TTGTTCC TGA GGAACAA CGACGCATCATAGGA TERM 54 45352 - 45334 - g 93 -9.6 -5.0917 | TCATGAAAAAACAAA TTACGAGG AAG CCTCGCAA CAGCTTCGGGCTATT CAB036 44048 - 45376 + | type III secretion system ATPase TERM 55 45587 - 45563 - g 70 -5.7 -4.45485 | opp_overlap 45568, overlap 45554 45565 ACTATATGCAGAAAA TTCAGCAACTC AGA GAGTTGTTGGA TGAAGGCACAACCAG CAB037 45397 - 45915 + | hypothetical protein CAB038 45906 - 46751 + | hypothetical protein TERM 56 47011 - 47030 + G 79 -3.4 -5.38054 | overlap 47012 AGTCTTTCTTGGCCC AGCCCCTG ACAT CAGGGACG TTTTTCTTTGTCACC CAB039 46764 - 47879 + | type III secretion system protein TERM 57 49125 - 49115 - g 75 -5.4 -4.79949 | TGGTTAAAAAAACAA GGAA AGG TTCC CCAGAATTTTACTAC CAB040 47897 - 49405 + | putative serine/threonine-protein kinase TERM 58 49818 - 49806 - g 72 -3.3 -5.07053 | AACTACTGCAAAAAA GACCC CTA GGTTC CTCTCTAAACAAGAA TERM 59 51053 - 51035 - g 70 -9 -3.15346 | opp_overlap 51034 51037, overlap 51033 AAGATTTCATCAACA CATTGAAT AGT ATTCAATG GTTAGATGTGAACAA CAB041 49402 - 52128 + | putative general secretion protein TERM 60 52204 - 52246 + T 88 -5 -5.64873 | gap 1 TATTTCAGGGGGAAA GCCAAGAAAGCATC-GTCG GCCGTA TGATTGTTGTTTTCTTGGC TTTTTTGTTCTTCAA TERM 61 52389 - 52376 - T 70 -2.5 -5.10077 | AAACATGGTAAAAAA TATTT ACAA AAATA AAACAAATGCTTACC TERM 62 52489 - 52473 - T 70 -8.1 -3.32963 | opp_overlap 52472 52473 AGGCCCATTCCATAA TGTGAAT CAA ATTCACA CCTTCTTTGTTTTAC CAB042 53847 - 52771 - | ATP:guanido phosphotransferase CAB043 54349 - 53831 - | hypothetical protein frr 55296 - 54754 - | ribosome recycling factor pyrH 56020 - 55280 - | uridylate kinase tsf 56884 - 56036 - | elongation factor Ts TERM 63 56678 - 56688 + g 81 -6.8 -4.7373 | AACGACAGCAGTGCC GCGA GAA TCGC TTTTTGCTGCGATAA rpsB 57714 - 56884 - | 30S ribosomal protein S2 TERM 64 58056 - 58029 - R 100 -11.4 -5.90981 | TGAGAGCAAAAAAAA TCAGAACCCAGA GATT CCTAGGTTCTGA TAGCGGGACAAAAAG ompA 59264 - 58095 - | major outer membrane protein precursor TERM 65 59507 - 59494 - H 76 -2.3 -5.58179 | overlap 59487 GACGATAAGAAAAAA GACTG TTTT CAGGC ACAGATTTCAAGCAA TERM 66 60862 - 60845 - g 91 -7.7 -5.20216 | TAGATCATGAAAAAA CCGAACA ATTT CGTTCGG CACAGTCTTTGAAAA TERM 67 62610 - 62577 - g 84 -12.6 -3.01791 | AGCGGTTCCTCAAGA TGTGGCGTATAATC GTTCGG GATTGTACGCCACA GCTATAGGGCAGCAT CAB049 59869 - 63141 + | putative penicillin-binding protein TERM 68 63128 - 63118 - f 90 -4 -5.94214 | overlap 63126 AATATAAGAAAAAAA GAAA AAT TTTC AGCTATGAACTGAGG CAB050 63209 - 64216 + | hypothetical protein TERM 69 64416 - 64450 + F 76 -6.4 -4.53349 | opp_overlap 64416 TTCTTTTCTAAACAA GTGTGAAAGTTAAAGC TTT GCTTTTTCCTTCACGC TTTCTTTAATGCTTC TERM 70 64756 - 64802 + G 77 -5.2 -4.91109 | overlap 64758 64800 TTACAAGAGCCTATA TGGGCTAGACTGTCCTATCCTA CGA TAGATTATGACAGTATAGTCTA TTTTTCTGCTCCAAA TERM 71 64803 - 64826 + G 80 -11.2 -2.91888 | overlap 64800 TGACAGTATAGTCTA TTTTTCTGCT CCAA AGCAGAAAAA TCCTTTAGGGCGTTT TERM 72 65299 - 65314 + G 72 -9 -3.37464 | opp_overlap 65301 TCGTATTCTTCACAT CAGCTG CATG CAGCTG TTGTAGAATTAGTGG CAB051 64552 - 66006 + | cysteine desulfurase activator complex subunit SufB CAB052 66010 - 66777 + | ABC transporter ATP-binding protein CAB053 66792 - 68018 + | putative ABC transport protein TERM 73 68802 - 68778 - g 70 -5.6 -4.38712 | opp_overlap 68796 GGCATTGTTAGAAAA GCTTCCTCCT GTAGA AGGTGGAGGC GATATGGTCTCCATT CAB054 68050 - 69270 + | putative cysteine desulfurase CAB055 70062 - 69274 - | hypothetical protein CAB056 70909 - 70256 - | hypothetical protein TERM 74 70330 - 70310 - G 77 -9.9 -3.49475 | opp_overlap 70307 TCCATCTTTATAGAA TTGTTCAAA TTC TTTGAACAA TGGCAGGGCTTTGAG CAB057 71150 - 71989 + | putative chromosome partitioning protein CAB058 72996 - 72028 - | putative peptide ABC transport ATP-binding protein TERM 75 72084 - 72095 + g 89 -5.8 -5.42265 | GTTCTGGGATAGGTC CCTG AAGG CAGG TTTTTTGTCGTTTAG dppD 73951 - 72989 - | putative peptide ABC transport ATP-binding protein TERM 76 73686 - 73672 - G 76 -7.2 -4.23207 | GAAAAATCATAGAAA TCTTTG TTC CAAAGA TAGAACGTAAGATAC CAB060 74005 - 74679 + | hypothetical protein TERM 77 75718 - 75728 + G 70 -3.2 -4.98522 | ATTACAGAACTCACA CCTT CAA GAGG TTTTTCTGTGGGGTT CAB061 74686 - 75966 + | putative phosphate permease TERM 78 76416 - 76428 + G 70 -3.3 -4.99035 | overlap 76417 TTGCTGCAGAACTTT CCTCC TAC GGAGA TTTTTATGTGAATGA pgk 76004 - 77215 + | phosphoglycerate kinase TERM 79 77293 - 77268 - f 100 -14.9 -3.02043 | opp_overlap 77263 77275 77291, overlap 77275 AATGGCTTTTTAATA GCATAAAGCTG AATC CAGCTTTATGC TGAAATCTTCATCAG TERM 80 77574 - 77586 + F 76 -3.5 -5.3472 | opp_overlap 77574 TCTATTTATTATTAA TTAAT TAT ATTAA TTTTGTTTCTTTTTT TERM 81 78820 - 78831 + G 72 -4.4 -4.82756 | opp_overlap 78806 AGGGCCGAAGTTAGG TCCT GACG AGGA TTTTGTTAATTATGT CAB063 77681 - 79186 + | hypothetical protein CAB064 79200 - 80372 + | hypothetical protein TERM 82 81397 - 81429 + G 77 -10.7 -2.85351 | opp_overlap 81389 81395 81407 GAAGGAAGCAAACGC TGCTCAAGGATTTCT TGC AGAAATCCTTCGGCG TATCATATCAGAAGA CAB065 80525 - 81679 + | hypothetical protein TERM 83 82852 - 82862 + T 76 -2.4 -5.44119 | opp_overlap 82852 CCCTTGCGCCAGAAA GCGG AGA CGGC TTTTTTTCGGCTCAC CAB068 83283 - 82921 - | hypothetical protein CAB069 84667 - 83366 - | putative D-alanyl-d-alanine carboxypeptidase CAB071 85624 - 85199 - | putative sigma regulatory factor-histidine kinase CAB072 86210 - 85611 - | putative lipoprotein CAB073 87183 - 86227 - | putative lipoprotein TERM 84 86334 - 86344 + g 70 -3.2 -4.91511 | AGATACTCGCTGCAT GAGG CTT CTTC TTTTTCTCGTAAAAT TERM 85 87176 - 87166 - G 79 -5.4 -4.89605 | opp_overlap 87166, overlap 87174 TAAAAAAACAACAAA CTGT AAA ACAG ATTTCATAAATCCGG TERM 86 87286 - 87299 + H 93 -3.9 -5.99154 | overlap 87283 AAAATATAATTTTTT TGTTT GATA AAACA TTTTTTTATTTAGTA TERM 87 87336 - 87322 - H 71 -4.4 -4.7261 | opp_overlap 87302 87301 87300 87330 87331, overlap 87300 87330 ATTTAGTAAAATAAA TAAAAA GGT TTTTTA TGAAAAAGTTAGTTT TERM 88 87353 - 87364 + G 72 -4.4 -4.70772 | GAAAAAGTTAGTTTT GTAC TTTG GTAC TTTTGTTGCATCTCT CAB074 87336 - 88220 + | putative outer membrane protein dnaE 91963 - 88217 - | DNA polymerase III subunit alpha TERM 89 88712 - 88692 - G 71 -6.9 -4.07647 | opp_overlap 88693, overlap 88693 88695 ATAGCGTAAATTAAA CGATCTTCT TCT AGAAGATCT TGCTGCTCAGCATAC TERM 90 88711 - 88693 - G 75 -10.4 -3.03865 | opp_overlap 88693, overlap 88692 88695 TAGCGTAAATTAAAC GATCTTCT TCT AGAAGATC TTGCTGCTCAGCATA TERM 91 88693 - 88711 + g 75 -10.4 -3.21416 | opp_overlap 88693 88692 88695 TAGCGTAAATTAAAC GATCTTCT TCT AGAAGATC TTGCTGCTCAGCATA TERM 92 91684 - 91698 + g 90 -3.4 -5.90231 | overlap 91686 ACAACAGAATGAGGT GATGGG CAA CCCGGC TTTTTTTCTCTTTCT CAB076 93337 - 91970 - | putative hexose phosphate transport protein TERM 93 92260 - 92248 - G 76 -3.3 -5.30348 | AGCCAATAACAAAAA GAAGG GAG CCATC TAACCACCACATATC TERM 94 93249 - 93262 + g 74 -3.9 -5.12617 | AAGATGCGGATTCTC CAATA CTTG TATTG TTTTTTGACTAATTC TERM 95 93440 - 93420 - H 74 -2.5 -5.30155 | TGAGCAATGAAAAAA CAAGAAGGT AAT AACATCTTG TAGTACCTGTAAACA CAB077 93583 - 93783 + | hypothetical protein TERM 96 94871 - 94887 + GF 100 -8 -5.67711 | CGTTTGATCCCGGTG GAGTCG CAGGC CGACTC TTTTTGTTTTGTTTG hisS 93851 - 95143 + | histidyl-tRNA synthetase TERM 97 95552 - 95574 + GF 72 -9.2 -2.65774 | overlap 95551 TTTAGATCGATTGGT CCATCGTCAT AAA GTGATGATGG CTTGTCGTCAGTATA aspS 95118 - 96872 + | aspartyl-tRNA synthetase TERM 98 97034 - 97018 - g 71 -9.5 -2.78384 | CTGCCTGTGATCAGA GTTCTCA CAA TGAGAAC ACGAAAACACAAGTT TERM 99 97572 - 97554 - g 71 -7.4 -3.93556 | opp_overlap 97557 97558, overlap 97557 ATGCAGGGAATGAAA GAAGGCGA AAC TCGCATTC TCTACATTCATCCCG mip 96948 - 97715 + | putative macrophage infectivity potentiator lipoprotein CAB081 97712 - 98182 + | putative rRNA methylase trxA 98487 - 98179 - | putative thioredoxin CAB083 99612 - 100334 + | hypothetical protein CAB084 100313 - 100774 + | hypothetical protein TERM 100 101496 - 101538 + G 73 -2.1 -5.18371 | opp_overlap 101490 101507, overlap 101507 101531 GACAAAAAGGCATAG GTTTTACGCAAGTCAATAA CCCAT TTATTGGCTTGTAAAACAC TTTTATTTTATAGAA dnaF 100784 - 101533 + | DNA polymerase III subunit epsilon TERM 101 101674 - 101684 + F 86 -6.8 -5.2189 | opp_overlap 101657 101658, overlap 101671 101673 AGAGAGCGTTGTCTC TCCC TAG GGGA TTTTTTAATGCTTAA CAB086 101692 - 102162 + | putative acyl-CoA thioester hydrolase TERM 102 102220 - 102238 + G 75 -3 -5.28414 | overlap 102218 102221 TCTCATAGCTTTCGC TCAGCCCG ATT TGAGCTGG TTTTTCTCTTTATTA TERM 103 103645 - 103634 - g 70 -5.8 -4.37092 | opp_overlap 103636, overlap 103636 ACCTGTTCTAGAAAA GCCT CCCC AGGC GTGTTACAAGTCGCT lnt 102170 - 103795 + | apolipoprotein N-acyltransferase TERM 104 104138 - 104126 - g 88 -9.1 -4.48713 | overlap 104128 GTGATGAAGAAGAAA TCCCC ATC GGGGA TGGAAGTTCTCATGT TERM 105 104340 - 104361 + G 70 -8.1 -3.73042 | overlap 104327 104339 AGGGACGCAGTACCG TTCTTTCGT TATA ACGGAAGAA TCTTTTCGTAAGGAA lpxC 103810 - 104667 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 106 105009 - 104982 - g 70 -9.1 -3.10705 | opp_overlap 104982, overlap 104981 ATACACAAAGCAAAG TTTCGCCAGGC AGTTAA GCCCGGCGACA TTCTTACATTGAGCG fabZ 104682 - 105146 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 107 105823 - 105835 + G 77 -7.7 -4.16016 | overlap 105816 ATCGTTCTGAAGACG GCTTC TTT GAAGC TTTATTAGAAGCTCA lpxA 105156 - 105995 + | UDP-N-acetylglucosamine acyltransferase fmt 105985 - 106950 + | methionyl-tRNA formyltransferase TERM 108 107970 - 107990 + G 77 -8.3 -3.88787 | CAGTTCGATTGGCTG TGACATCAG GAG CTGTTGTCA TTTCTAGCGGTATCG CAB092 107060 - 108034 + | hypothetical protein TERM 109 108065 - 108097 + F 100 -16.6 -4.1552 | opp_overlap 108069, overlap 108069 ATTTCGCCAATATTG TAAATCGCTTCTAG AAAAC CTAGAAGCGATTTA TTTATTAGCGAACTA TERM 110 108069 - 108093 + F 100 -13 -4.67607 | opp_overlap 108069, overlap 108065 CGCCAATATTGTAAA TCGCTTCTAG AAAAC CTAGAAGCGA TTTATTTATTAGCGA TERM 111 108093 - 108069 - f 100 -13.7 -3.66803 | opp_overlap 108069 108065 CGCCAATATTGTAAA TCGCTTCTAGA AAA CCTAGAAGCGA TTTATTTATTAGCGA TERM 112 108217 - 108232 + F 76 -6.2 -4.60255 | opp_overlap 108195 CTTTATTTTCTTAAG GAAAAG GCTC CTTTTC TTTTTAGGGAATTCT TERM 113 108276 - 108305 + F 84 -9.9 -3.71998 | CTATCACGATTTGCC TGGTTGCCCTCGC TTGA GCGCGGACAGCCA TTGTATTAGTGGGTA TERM 114 108461 - 108451 - g 73 -5.4 -4.55287 | GTTACTCAGATAAAA GTTG ATT CAAC AGATGGTTACAACGC rplC 108328 - 108993 + | 50S ribosomal protein L3 TERM 115 109022 - 109032 + G 82 -4 -5.42259 | CTAATGGTTTTATTA TCAA AGT TTGA TTTTTTTGGGAATAA rplD 109010 - 109684 + | 50S ribosomal protein L4 rplW 109701 - 110036 + | 50S ribosomal protein L23 rplB 110058 - 110912 + | 50S ribosomal protein L2 rpsS 110918 - 111184 + | 30S ribosomal protein S19 TERM 116 111294 - 111309 + G 79 -5.4 -4.91712 | TAAGTGTTACGGAAG CTCAGC AACA GTTGAG TTTTTCTCAGTTGAA rplV 111203 - 111538 + | 50S ribosomal protein L22 TERM 117 111698 - 111685 - g 84 -2.4 -5.7946 | TTCTTAAGAAAAAAA CCTT CTTGTC AAGG GGCTGCGGGCTTTGT TERM 118 112011 - 111998 - g 71 -6.7 -4.09685 | CTGTAGGTGTGAAAA TCCAG GTTT CTGGA AGATTAGCAGGAGCT rpsC 111547 - 112218 + | 30S ribosomal protein S3 rplP 112248 - 112661 + | 50S ribosomal protein L16 TERM 119 112727 - 112711 - g 76 -2.3 -5.37043 | AGCTTAGACAAAAAA GTCTA GTTGAGT TAGAC GCGTTTATCCATGAA rpmC 112668 - 112886 + | 50S ribosomal protein L29 rpsQ 112879 - 113130 + | 30S ribosomal protein S17 rplN 113165 - 113533 + | 50S ribosomal protein L14 rplX 113548 - 113889 + | 50S ribosomal protein L24 TERM 120 114098 - 114083 - g 83 -7.6 -4.83169 | ATTTCTGGACAAAAA CCTTTG GTCA CAAAGG CTAGAAATTCTATCG TERM 121 114223 - 114237 + G 73 -7.8 -3.89346 | opp_overlap 114222 114223, overlap 114224 TGTCTCTCCTAGAAT TCGCGA CTT TCGCGG TTTCTCAAGTAAAGG rplE 113891 - 114433 + | 50S ribosomal protein L5 rpsH 114452 - 114853 + | 30S ribosomal protein S8 rplF 114885 - 115436 + | 50S ribosomal protein L6 rplR 115459 - 115830 + | 50S ribosomal protein L18 rpsE 115846 - 116343 + | 30S ribosomal protein S5 rplO 116336 - 116770 + | 50S ribosomal protein L15 TERM 122 117887 - 117871 - g 71 -3.8 -4.98531 | TTCTGAAATGAAAAA GAATAA TGCCT TTATTC CTGGAATTCGACAAG secY 116795 - 118168 + | preprotein translocase subunit SecY rpsM 118224 - 118592 + | 30S ribosomal protein S13 rpsK 118613 - 119011 + | 30S ribosomal protein S11 rpoA 119032 - 120162 + | DNA-directed RNA polymerase subunit alpha rplQ 120171 - 120599 + | 50S ribosomal protein L17 TERM 123 121110 - 121121 + G 72 -4.4 -4.69656 | CAAATTGTCTCGCTC CCTT AGCT AAGG TTTTATTGGATAGTT gapA 120638 - 121645 + | glyceraldehyde-3-phosphate dehydrogenase CAB116 121658 - 122479 + | hypothetical protein CAB117 122987 - 123889 + | hypothetical protein TERM 124 124258 - 124270 + G 85 -9.1 -4.2231 | overlap 124255 AAGTTAGGCATGGGA CGAGG AGT CCTCG TTTTAGCTGCTGCTT ruvC 123997 - 124503 + | Holliday junction resolvase TERM 125 124975 - 124956 - g 74 -6.5 -4.3534 | TGGGAACCAGCAAAA CCTTCTT GTATGG AAGAAGG AATACAAGCTTTAGC ruvA 124503 - 125126 + | Holliday junction DNA helicase motor protein ndk 125197 - 125622 + | nucleoside diphosphate kinase CAB121 126336 - 125635 - | hypothetical protein gidA 128158 - 126323 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA dnaB 130065 - 128620 - | replicative DNA helicase TERM 126 130846 - 130865 + G 77 -10.8 -2.81207 | opp_overlap 130850, overlap 130836 130834 130845 130850 TCTTGCTCGTCGCTA CAAAGCGA CTAG TCGCTTTG GTTCTATGTTGGATC CAB124 130703 - 131209 + | putative alcohol phosphatidyltransferase TERM 127 131707 - 131725 + G 100 -10.3 -5.5604 | opp_overlap 131707 131706 GGTTGGTTAAGTAAT CGGTGTC CAAGA GACACCG TTTTTTATTCCTTCA TERM 128 131725 - 131707 - g 76 -11 -2.60075 | opp_overlap 131707, overlap 131706 GGTTGGTTAAGTAAT CGGTGTCC AAG AGACACCG TTTTTTATTCCTTCA npt2 131446 - 133095 + | putative nucleoside triphosphate transport protein 2 TERM 129 133102 - 133115 + F 100 -9.5 -5.19251 | opp_overlap 133102 ATACTATGATTTAAA GGGCG TTTA CGCCC TTTTTATTCATATTC TERM 130 133115 - 133102 - f 81 -9.5 -3.6959 | opp_overlap 133102 ATACTATGATTTAAA GGGCG TTTA CGCCC TTTTTATTCATATTC TERM 131 133440 - 133414 - g 72 -10.2 -2.71497 | overlap 133413 133416 GTATTGGAAATGAAG GATGTGATTGCT TCT AGCAAACACACC GCAAAAATCATTCAA sohB 133198 - 134205 + | putative exported protease polA 134233 - 136842 + | DNA polymerase I coaE 136827 - 137444 + | dephospho-CoA kinase TERM 132 138047 - 138059 + G 70 -9.1 -3.15503 | opp_overlap 138043, overlap 138044 ATGGGGAAGGAGCAC CTCGC TGA GCGAG TGTTAGATCTTACGG rho 137441 - 138835 + | transcription termination factor Rho TERM 133 138899 - 138926 + T 80 -10 -3.4997 | overlap 138898 138900 CTGAGAATCCTGAAG CCTACAGTCTTA ACCA TAAGACTGTAGA TCTTGTTCTCCATAT TERM 134 138900 - 138925 + T 88 -13.5 -2.69259 | overlap 138899 138898 TGAGAATCCTGAAGC CTACAGTCTTA ACCA TAAGACTGTAG ATCTTGTTCTCCATA CAB130 139361 - 139101 - | hypothetical protein TERM 135 139142 - 139158 + g 71 -6.6 -4.08644 | opp_overlap 139134 139133 139141 AAACTAGTAGGGAAG TCTCTC CCCCA GAGAGA TATTTTTCTGGTAAT pyrE 139423 - 140043 + | putative orotate phosphoribosyltransferase TERM 136 140560 - 140590 + G 74 -4.8 -4.70046 | overlap 140562 140568 140571 CTATTCGTCAAAATC TTCTCTATCTCG AAGATAC TGAGATAGAGTA TTTTCTAGTTTTGTC TERM 137 140562 - 140588 + G 71 -7.4 -3.9392 | overlap 140560 140568 140571 ATTCGTCAAAATCTT CTCTATCTCG AAGATAC TGAGATAGAG TATTTTCTAGTTTTG glgC 140157 - 141509 + | putative glucose-1-phosphate adenyltransferase CAB133 141624 - 142367 + | hypothetical protein CAB134 142364 - 142927 + | hypothetical protein TERM 138 142980 - 142997 + F 76 -4.9 -5.055 | overlap 142981 ACAGCTAGTATGTTT TCTGTTT TGAT AAACAGG TTTTTTAGCCCTTAA TERM 139 143019 - 143029 + F 74 -4 -5.08088 | AGCCCTTAAGCCATT CTTT CGA AAAG TTTTTATTCAAAATT CAB135 143128 - 143880 + | putative transport lipoprotein hemH 144841 - 143885 - | ferrochelatase TERM 140 145063 - 145073 + G 76 -3.2 -5.29742 | AATGAGTGTGGAGTT GGGA GTC TTCC TTTATTTTTTTCTGT TERM 141 145178 - 145191 + G 76 -2.3 -5.42862 | opp_overlap 145187 145190 CGTTTGTACATACTG TCCGG AAAA CCAGA TTTTTTTGAAAATCT TERM 142 145339 - 145322 - g 70 -8.5 -3.2697 | opp_overlap 145325, overlap 145321 145330 145332 ATAGATTTACAAAAT CAAGAGT ACAC ACTCTTG TCGAGTATGCTAAAT CAB137 144935 - 145942 + | hypothetical protein TERM 143 146102 - 146119 + G 73 -7 -4.2535 | opp_overlap 146102 GCACACGTTATGAAA TCGCCA GCGCCG TGGCGA TTTTCGGTCTGATAT CAB138 145996 - 146319 + | hypothetical protein TERM 144 147704 - 147694 - g 79 -5.4 -4.8743 | CTGAAAACAAAGAAA GTGA GAA TCAC ACTGTCAAGCATCAT CAB139 147525 - 147725 + | putative lipoprotein TERM 145 147741 - 147771 + F 82 -11.3 -3.3197 | gap 1, opp_overlap 147749, overlap 147745 147749 GAGTTCTACTTGTGT TGATGAAACAGGGG GATG CCCCTGTTTC-TCG TTGTGAACATCCTCT TERM 146 147745 - 147768 + F 100 -15.4 -2.83271 | opp_overlap 147749, overlap 147741 147749 TCTACTTGTGTTGAT GAAACAGGGG GATG CCCCTGTTTC TCGTTGTGAACATCC TERM 147 147749 - 147764 + F 89 -10.4 -4.1021 | opp_overlap 147749, overlap 147745 147741 CTTGTGTTGATGAAA CAGGGG GATG CCCCTG TTTCTCGTTGTGAAC TERM 148 147764 - 147749 - f 86 -10.4 -3.72576 | opp_overlap 147749 147745 147741 CTTGTGTTGATGAAA CAGGGG GATG CCCCTG TTTCTCGTTGTGAAC TERM 149 148642 - 148652 + F 73 -5.4 -4.55287 | TGCTGTAGTCTTTGG CAGA GGA TCTG TTTTATATGAATAAA TERM 150 149659 - 149672 + G 73 -2.3 -5.35224 | CTATGAACTATATTG TGAGC TGCG GCGCA TTTTATTTTTCTGGA TERM 151 150617 - 150628 + G 86 -4.4 -5.35815 | TCCTTATGCTTTCTT GTAC TCCC GTAC TTTTTCTTTACTCTA CAB140 148659 - 150776 + | putative transport protein TERM 152 151043 - 151065 + G 93 -10.7 -4.91712 | opp_overlap 151034, overlap 151034 ATAGAAGAAATCGTC GATTGCTTC ATCAA GAAGCAATC TTTTTCTAAATTAAA CAB141 150758 - 152227 + | putative transport protein TERM 153 152535 - 152515 - g 72 -9.7 -3.03159 | opp_overlap 152496 152509 152518, overlap 152518 GCAAGCTCTTTAAGA GAAGAGCTC GTA GGGCTCTTC TTGGGATTTTAACTC TERM 154 152518 - 152532 + G 70 -7.8 -3.73106 | opp_overlap 152518 152515, overlap 152496 152509 AGCTCTTTAAGAGAA GAGCTC GTA GGGCTC TTCTTGGGATTTTAA CAB142 152229 - 153962 + | putative transport protein ada 154486 - 153959 - | putative DNA methyltransferase TERM 155 154344 - 154328 - G 76 -4.4 -5.10765 | overlap 154339 AAATAAACAAGAAAA TACCGG AGATA CCGATA ACTCAGTTTTTACAA CAB144 155469 - 154498 - | lipoprotein pheT 157850 - 155466 - | phenylalanyl-tRNA synthetase subunit beta TERM 156 158010 - 158024 + Gr 90 -3.6 -5.81622 | CTTTAGTTTTAAGCG CAGTAT TAA ATATTG TTTTTTTACTTTTGT CAB147 159278 - 158967 - | hypothetical protein CAB146 157958 - 159043 + | hypothetical protein CAB148 160062 - 159268 - | hypothetical protein CAB149 160344 - 160934 + | putative lipoprotein recO 161633 - 160908 - | DNA repair protein RecO CAB151 162222 - 161638 - | hypothetical protein CAB152 162850 - 162167 - | hypothetical protein TERM 157 162205 - 162224 + g 70 -2.8 -5.01553 | overlap 162206 162209 CGATAATTGGTTCGA TGAGGACA TAAT TGTCATCG TTTTGTTTGTGGATT TERM 158 162923 - 162909 - R 74 -3.6 -5.1286 | GAAAAATCAGAAAAA GAAAAA GAG TTTCTC CTATCTGTTATTATA CAB153 164310 - 163150 - | putative sigma-54 dependent response regulator TERM 159 163275 - 163289 + g 71 -5 -4.53774 | overlap 163283 GAAGAGCAGATTTGG CGCTTT CCG AAAGTG TTTTCATTGGTTTAT TERM 160 165014 - 165044 + G 83 -9.8 -3.89614 | opp_overlap 165024, overlap 165015 165017 165024 GTTTCTTATCTTCTG GCACAGAAAACAGG TAC CCTGTTTTATGTGA TTTATCCGCATTCCG TERM 161 165015 - 165043 + G 91 -13.3 -2.93447 | opp_overlap 165024, overlap 165014 165017 165024 TTTCTTATCTTCTGG CACAGAAAACAGG TAC CCTGTTTTATGTG ATTTATCCGCATTCC TERM 162 165017 - 165041 + G 75 -10.1 -3.0169 | opp_overlap 165024, overlap 165015 165014 165024 TCTTATCTTCTGGCA CAGAAAACAGG TAC CCTGTTTTATG TGATTTATCCGCATT TERM 163 165034 - 165024 - g 79 -6.8 -4.52589 | opp_overlap 165017 165015 165014 165024 TTCTGGCACAGAAAA CAGG TAC CCTG TTTTATGTGATTTAT TERM 164 165024 - 165034 + G 79 -6.8 -4.65584 | opp_overlap 165024, overlap 165017 165015 165014 TTCTGGCACAGAAAA CAGG TAC CCTG TTTTATGTGATTTAT TERM 165 165411 - 165421 + G 70 -5.4 -4.46112 | GCTTTCTCTGATTTA TGAG GCA CTCA TTTCTTTAGCTAAGC CAB154 164494 - 167532 + | hypothetical protein atoS 168600 - 167548 - | putative 2-component regulatory system-sensor histidine kinase TERM 166 167782 - 167794 + g 72 -3.4 -5.03145 | overlap 167761 167780 GATCGGAGATTCCGT TGCT TCTGC AGCA TTTTTTACAAGATTC CAB156 168970 - 168581 - | hypothetical protein CAB157 169804 - 169139 - | hypothetical protein TERM 167 170249 - 170263 + Gr 76 -4.2 -5.10029 | AGTTCCTCCGTTACT TCCTGG TGT CGAGGA TTTTTTACGGTTCCT TERM 168 170326 - 170338 + Gr 79 -5.5 -4.84761 | overlap 170327 CAAATTCTTCCTATG TGCTG ACG CAGCG TTTTTGTGAGGCTAT TERM 169 170436 - 170446 + Gr 79 -6.8 -4.63218 | opp_overlap 170435, overlap 170418 GACAGCTATCAATAT GCCT ATC AGGC TTTTGTTCAAGAAGG TERM 170 170520 - 170532 + Gr 72 -9.1 -3.28416 | opp_overlap 170496, overlap 170515 GCTCTTGCAGGCATT CCAGC CAC GCTGG TTGCTGTGAATGCTA truA 171406 - 170600 - | tRNA pseudouridine synthase A CAB158 169965 - 170654 + | hypothetical protein ispD 172056 - 171403 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 171 171682 - 171658 - GTR 82 -11.5 -2.85351 | opp_overlap 171658 171653 171651, overlap 171663 TTGTTTGATAGTATA GGGAACGTTAG AAA CTAACGTTGCC GCTCCTGTTTGGTAT TERM 172 171677 - 171663 - GTR 71 -8.6 -3.1544 | opp_overlap 171658 171653 171651, overlap 171658 TGATAGTATAGGGAA CGTTAG AAA CTAACG TTGCCGCTCCTGTTT CAB161 173005 - 172031 - | hypothetical protein TERM 173 172186 - 172167 - GR 78 -9.4 -3.53012 | opp_overlap 172166 172165 172167 TGGCCTCGCGCTAAA TCAGGATT TTCT AATCCTGA AGTTTTATTCATTAT TERM 174 172167 - 172186 + gr 72 -9.4 -2.67732 | opp_overlap 172167, overlap 172166 172165 TGGCCTCGCGCTAAA TCAGGATT TTCT AATCCTGA AGTTTTATTCATTAT TERM 175 172811 - 172801 - GR 70 -5.4 -4.43208 | opp_overlap 172801 ACAGCTTTAAAGAAA CCTT TTT AAGG AATTTTTTTGGAACA CAB162 173340 - 173077 - | hypothetical protein TERM 176 173310 - 173326 + g 76 -2.3 -5.48825 | TATTGACAGGGTTCA TAAAAGC AGA GTTTTTG TTTTTTTGACTCATC prfB 173622 - 174729 + | peptide chain release factor 2 CAB164 174726 - 175238 + | putative transferase TERM 177 175594 - 175608 + F 71 -4.2 -4.72201 | CACCGTTCTTTAGAT CGTGAT GAT ATCCCG TTATTTTTTATGCAA TERM 178 175674 - 175690 + F 100 -9.5 -4.72272 | overlap 175663 TCCTCGTGAGTATTC TCGTTCT GGA AGAACGA TTTTTCATGGGAAGA CAB166 175817 - 176533 + | hypothetical protein TERM 179 176529 - 176563 + T 100 -16 -3.04269 | opp_overlap 176526 176527 176524, overlap 176534 TATACCATAATATGG CCTAAGGCTTTTCT AGATTAG AGAAAAGCCTTAGG TATCTATAGTCTACG TERM 180 176534 - 176558 + T 71 -8.7 -3.18065 | opp_overlap 176526 176527 176524, overlap 176529 CATAATATGGCCTAA GGCTTTTCT AGATTAG AGAAAAGCC TTAGGTATCTATAGT CAB167 179186 - 176574 - | hypothetical protein TERM 181 176791 - 176816 + g 79 -9.7 -3.72405 | overlap 176809 176812 TGTATAACATTTCCA GCTGCTTCGGG AATG CCTGAAGGAGC TTCTCCTTTTGTCAA TERM 182 176812 - 176822 + g 76 -6.8 -4.4017 | overlap 176791 176809 TCGGGAATGCCTGAA GGAG CTT CTCC TTTTGTCAACGTTGC TERM 183 180690 - 180654 - g 79 -5.9 -4.86621 | opp_overlap 180661, overlap 180656 ATCCTTAATCAAAAA CACCCAGTTGTTAGATC GGG GATATTACAATTGGGTA GACAAACTGAACTCT CAB168 179419 - 180753 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase argS 182444 - 180756 - | arginyl-tRNA synthetase TERM 184 181607 - 181632 + g 81 -2.5 -5.54907 | gap 1, overlap 181611 CATGAAAAACACATT TCGCCTCATCGG AAA CCG-TGATGAGA TTTTTCTTTTCTAAG CAB170 183092 - 182445 - | hypothetical protein TERM 185 182822 - 182806 - G 83 -10.9 -3.66666 | TTTAAAATTTCGAAA GCAGCTT TAC AAGCTGC AGCATTTCCCCCCCC cmk 183739 - 183089 - | cytidylate kinase TERM 186 183544 - 183522 - G 71 -4.1 -5.00616 | TTTCCTTCTAAAAAA GCTTCCAAG GGCTG CCCGGAAAC AAAGGAAAAAGAAAA CAB172 184656 - 183736 - | hypothetical protein CAB173 185411 - 184659 - | putative peptidoglycan synthetasis protein TERM 187 185768 - 185792 + H 91 -4.4 -5.86976 | opp_overlap 185768 TCATTTGTCAACATA TTCCCTAA AACAGACGG TTAGGGAA TTTTTTGTTTTCTAC CAB174 185994 - 187106 + | hypothetical protein TERM 188 187103 - 187140 + F 84 -5.1 -5.28826 | gap 1, opp_overlap 187107 CTGGTGTCATGTGAT TTAATCTACCCTAA-AGA CAC TCTCTTGAGGTAGATTGA TTTTTTATGAAATTT TERM 189 187784 - 187797 + G 71 -3.9 -4.93877 | opp_overlap 187784 ACTACGGCTTTAACA GAAAA TGAT TTTTC TTTTGTTTCCTACAA TERM 190 189294 - 189308 + G 73 -7.2 -4.12198 | opp_overlap 189294 CTGGATCTACCAAAA TTTCCT CCG AGGAAA TTTTAGGAACTTCTC TERM 191 189308 - 189294 - g 76 -7.2 -4.2828 | opp_overlap 189294 CTGGATCTACCAAAA TTTCCT CCG AGGAAA TTTTAGGAACTTCTC TERM 192 190987 - 191013 + G 85 -7.4 -4.99134 | GGGAATCGATATCTC TTCTGAAAGTCT CAA AGATGTTCAGAA TTTTTGGTTTAAAGT CAB175 187355 - 191569 + | bifunctional preprotein translocase subunit SecD/SecF TERM 193 191591 - 191556 - f 86 -10 -4.00532 | opp_overlap 191561, overlap 191561 TTCGTAAAGAGGAAA GAAAACAACAATAACC CTCA AGTTATTGTTGTTTTT GGTTCAGAAGGATGA TERM 194 191586 - 191561 - f 100 -9.9 -5.00923 | opp_overlap 191561, overlap 191556 AAAGAGGAAAGAAAA CAACAATAACC CTCA AGTTATTGTTG TTTTTGGTTCAGAAG TERM 195 191561 - 191586 + F 100 -9.2 -4.8622 | opp_overlap 191561 191556 AAAGAGGAAAGAAAA CAACAATAAC CCTCAA GTTATTGTTG TTTTTGGTTCAGAAG TERM 196 191614 - 191641 + F 78 -6.5 -4.56597 | opp_overlap 191614 AAGGATGAGAAAATG CTCTTTAGAAA GATAGA TTTTTAAAGAG TTTTTACGACGCGAA CAB176 191662 - 193434 + | putative exonuclease CAB177 193885 - 195033 + | hypothetical protein CAB178 195654 - 196196 + | hypothetical protein TERM 197 197497 - 197511 + G 70 -2.8 -5.08088 | opp_overlap 197491 AAACTAAAAGATTGG CTAATC AAT GATGAG TTTTTCTTGAAAATT gltX 196465 - 197982 + | glutamyl-tRNA synthetase TERM 198 198809 - 198792 - g 73 -7.7 -3.82963 | overlap 198790 TGGCAACAAGAAAGA CAAAGGC TGTA GCCCTTG TGGTACTTATACACC omlA 198658 - 198921 + | outer membrane lipoprotein TERM 199 198956 - 198992 + F 91 -11.7 -3.86897 | TACTTAAATTGGTTA GGTAGTTAGGAGGTAAA GTA TTTCCCTGCTAACTGCC TTTATGAAAAATAAA cmcB 199087 - 200760 + | membrane protein TERM 200 200830 - 200803 - f 100 -8.4 -5.37593 | opp_overlap 200804, overlap 200804 TTGTAAACGAAAAAA GGCCGTCCTAGA GTTG TCTAGGATGGCT TTTTTGTTTCTCTTT TERM 201 200829 - 200804 - f 93 -11.9 -3.81472 | opp_overlap 200804, overlap 200803 TGTAAACGAAAAAAG GCCGTCCTAGA GTTG TCTAGGATGGC TTTTTTGTTTCTCTT TERM 202 200804 - 200829 + F 100 -14.1 -5.7827 | opp_overlap 200804 200803 TGTAAACGAAAAAAG GCCGTCCTAGA GTTG TCTAGGATGGC TTTTTTGTTTCTCTT srp 200971 - 201453 + | putative sulfur-rich membrane protein TERM 203 201517 - 201489 - T 78 -9 -3.66803 | opp_overlap 201480, overlap 201491 TTTTAATATTTTAAA TATTTAGGAGGT GTTTA ACCTCCTAAAGA CACAGCCGCTTTACG TERM 204 201515 - 201491 - T 85 -11.6 -3.41302 | overlap 201489 TTAATATTTTAAATA TTTAGGAGGT GTTTA ACCTCCTAAA GACACAGCCGCTTTA CAB183 203458 - 201503 - | putative exported protease CAB184 203864 - 203586 - | hypothetical protein CAB185 203965 - 204915 + | hypothetical protein rpsL 205111 - 205482 + | 30S ribosomal protein S12 rpsG 205526 - 205999 + | 30S ribosomal protein S7 TERM 205 206869 - 206854 - g 74 -4.7 -4.85782 | opp_overlap 206854 GCCTTTAAAAACAAA GGAGT GCAACA ACTCC TTAATGTTATCGTCA TERM 206 207251 - 207234 - g 81 -7.1 -4.63486 | ACTTTGCGAAGAAAA TCAAGAA ATTG TTCTTGA ACGTATCGAAATCCC CAB188 206041 - 208125 + | elongation factor G rpsJ 208133 - 208450 + | 30S ribosomal protein S10 TERM 207 208993 - 209015 + G 77 -4.9 -4.96501 | gap 1, opp_overlap 208993 TATTCTGGAGAATAT GAGCA-ACGC TACG GTGTCTGCTC TTTCTTTTTGTGCAG TERM 208 209491 - 209469 - g 71 -7 -4.12603 | TCTAGGAAAGAATAA GCTCTCCC AATTAAA GGAAGAGC ACCGTTATGTCGCTG CAB190 208468 - 209517 + | putative oxidoreductase ispF 210044 - 209514 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase rplU 211069 - 211389 + | 50S ribosomal protein L21 rpmA 211420 - 211668 + | 50S ribosomal protein L27 TERM 209 211707 - 211738 + TF 100 -8.8 -4.98672 | opp_overlap 211707, overlap 211694 AAGTTTGTCTAGCAA GCTCTATTTTTTGC TTAT GCATAAAATGGGGC TTTTCTATTTTTAAC TERM 210 212051 - 212023 - gT 75 -8.9 -3.53761 | opp_overlap 212029 212048, overlap 212011 212026 TAACCGCTCGGGAAA GAACGGTAAAGAC CTC GTCTTAATCGTTC CCGAAGGAACTTTAC CAB195 213582 - 212689 - | putative transport protein obgE 211784 - 212791 + | GTPase ObgE CAB196 214298 - 213579 - | putative ATP-binding ABC transport protein TERM 211 214226 - 214200 - G 82 -8.8 -4.21989 | opp_overlap 214200 214199 214196 TATAATGCCAATAAA GTCCCCTTCA TGAACGG TGAAGGAGAC GTTATTGATAATCCA CAB197 215131 - 214295 - | putative transport poprotein TERM 212 214588 - 214606 + g 75 -10.2 -3.11162 | opp_overlap 214587 214588, overlap 214585 214585 GCGCAACTAAAATAT GCCGCTGC TTA GCAGCTGC TGTGATTTCTTGAAT TERM 213 214606 - 214588 - G 73 -10.2 -2.88268 | opp_overlap 214588 214585 214585, overlap 214587 GCGCAACTAAAATAT GCCGCTGC TTA GCAGCTGC TGTGATTTCTTGAAT TERM 214 215494 - 215514 + H 76 -7.7 -4.11275 | TCCCTACGTATTTTT TATTCTTGT ATA ACAAGGATA TTTACTTTAACTTAT TERM 215 215602 - 215592 - H 81 -5.4 -5.21709 | GTTTAGATGAAAAAA GTTC TTA GAAC CTGCTCGAGTTAATA thiE 215725 - 216363 + | putative thiamine-phosphate pyrophosphorylase thiM 216357 - 217145 + | putative hydroxyethylthiazole kinase TERM 216 217179 - 217225 + T 76 -10.5 -2.69151 | gap 1, overlap 217176 AACTGAATCTTGTTG AGTTGTGTAATTGTAGAACCTA AATC TAGATTCT-CAATTACACAACA TGGTCTCTACAAAAA pmp1B 222631 - 217265 - | polymorphic outer membrane protein TERM 217 218060 - 218083 + g 78 -7.5 -4.36508 | opp_overlap 218045 218060 CCCTCGGCTATGATA GGAGAAGGA CCTGGA TTCTTCTCC TTGTTCTTTTTGTAA TERM 218 218617 - 218574 - G 78 -11 -3.01712 | opp_overlap 218574 218577, overlap 218577 TTGTTTCTGGCAACA TGAGCTCTAGCTCCTGCTGC TGCC GCTGCAGGAGCTACACCTAA TTTTAACGCAGGAGG TERM 219 218574 - 218617 + g 88 -11 -4.07568 | opp_overlap 218574 218577, overlap 218577 TTGTTTCTGGCAACA TGAGCTCTAGCTCCTGCTGC TGCC GCTGCAGGAGCTACACCTAA TTTTAACGCAGGAGG TERM 220 218614 - 218577 - G 83 -12.7 -2.73875 | opp_overlap 218574 218577, overlap 218574 TTTCTGGCAACATGA GCTCTAGCTCCTGCTGC TGCC GCTGCAGGAGCTACACC TAATTTTAACGCAGG TERM 221 218577 - 218614 + g 84 -12.7 -3.08032 | opp_overlap 218577 218574, overlap 218574 TTTCTGGCAACATGA GCTCTAGCTCCTGCTGC TGCC GCTGCAGGAGCTACACC TAATTTTAACGCAGG TERM 222 221770 - 221736 - G 75 -7.8 -3.97042 | opp_overlap 221745 221746 TTAGGAGGAACTAAA CCACCAACTCCAGCTC CAG GAGCTGATTTTGCTGG TAGAACGGGAACCAG TERM 223 221745 - 221761 + g 71 -6.5 -4.30576 | opp_overlap 221736, overlap 221746 ACTAAACCACCAACT CCAGCTC CAG GAGCTGA TTTTGCTGGTAGAAC TERM 224 221746 - 221760 + g 75 -10 -3.18024 | opp_overlap 221736, overlap 221745 CTAAACCACCAACTC CAGCTC CAG GAGCTG ATTTTGCTGGTAGAA TERM 225 222618 - 222607 - G 75 -5.8 -4.7373 | opp_overlap 222612 GTACGGCAGCAAAAA CAGC TGTA GCTG ATAGCCACTTCATAG pmp2A 225634 - 222833 - | polymorphic outer membrane protein TERM 226 224316 - 224304 - G 76 -9.1 -3.68351 | overlap 224308 TCTTGACGATCTAAA GGGAG TTT CTCCC CAGAGAAAATCACAG CAB202 226157 - 225855 - | hypothetical protein TERM 227 225888 - 225902 + g 73 -7.2 -4.00683 | GATCATTGCTTTTGT GAAATC CTT GATTTC TTTAGTTAGATTTTT CAB203 226535 - 226182 - | hypothetical protein TERM 228 226676 - 226657 - R 100 -9.4 -5.27476 | TCGAAGAAAAGAAAA TCCCTAAT AAGA ATTAGGGA TATGAGGTTGGTAAT CAB204 228085 - 226736 - | hypothetical protein lspA 228648 - 228151 - | lipoprotein signal peptidase CAB206 229028 - 228654 - | hypothetical protein CAB207 229517 - 229059 - | transcriptional regulator NrdR ribC 229735 - 230328 + | riboflavin synthase subunit alpha CAB209 230341 - 231165 + | hypothetical protein CAB210 231153 - 231950 + | hypothetical protein TERM 229 232048 - 232061 + F 85 -2.5 -5.85011 | opp_overlap 232057, overlap 232057 AAAAATATATGTGAT TTTTA TATA TAAAA TTTTTTTAATTTTTC lpxK 232181 - 233302 + | tetraacyldisaccharide 4'-kinase TERM 230 233435 - 233446 + G 72 -4.4 -4.69053 | TTGAGCATGGTTGTC TACC CTCT GGTA TTTTGTTCCATGGTG TERM 231 233671 - 233684 + G 71 -3.9 -4.87291 | TACGTATTTCTTGTC TTTGA TTTC TCAAA TTTTTCCTTCAAATC CAB212 233306 - 234556 + | putative symport protein CAB214 234569 - 235738 + | branched-chain alpha-keto acid dehydrogenase subunit E2 CAB215 235769 - 236758 + | hypothetical protein TERM 232 236825 - 236815 - T 73 -5.4 -4.56629 | opp_overlap 236807, overlap 236805 TACAAGATGAGAAAA CTCA TCT TGAG GGCAACCATTCATCT TERM 233 237072 - 237086 + T 80 -10 -3.58542 | overlap 237070 GTAGCCTTACGGCCC CTGGAG TTT CTCCAG TATCTTTTCTTATGA CAB216 237940 - 237176 - | hypothetical protein TERM 234 237868 - 237888 + g 70 -5.4 -4.3467 | TCTGATGCTCTTTCT TGACTCGC ATTAA GCGAATCA TTTTAATATCGAGCT TERM 235 238093 - 238083 - R 75 -5.4 -4.87892 | TTTCAATAAAAGAAA TTCC TAA GGAA CAGCAACTTAAGAAG TERM 236 238356 - 238386 + r 71 -4.6 -4.85129 | opp_overlap 238356 TGTATTTACATAGAA GAGGAGAGGATCCT GAT AGGGAAGTCTCCTC TTTTTACTCTCTACT CAB217 239472 - 238402 - | hypothetical protein TERM 237 239197 - 239176 - G 70 -9.5 -2.71144 | GAGTGTTCTGAAGGA TTGGTCTAG AGCT CCAGACCAA TCCCCATCGGCTTTT CAB218 239880 - 239539 - | hypothetical protein TERM 238 239595 - 239583 - G 70 -7.7 -3.78034 | TAGTTATATTAAGAA GCTGA TTT TCAGC GGGATAAACCCGAAG hemD 240612 - 239947 - | uroporphyrinogen-III synthase TERM 239 241247 - 241269 + G 76 -7 -4.36914 | opp_overlap 241250, overlap 241250 GTGGAAACGGCTAAA GAACTTTTCG GAG CGGAAAGTGC TTTTGTACAACCACA TERM 240 241805 - 241815 + G 73 -6.8 -4.20806 | overlap 241794 AAGACTTTGCGAGGA CCTC GTG GAGG TTTAGTTTTAGCATC TERM 241 242374 - 242384 + G 75 -8.2 -3.9712 | overlap 242373 CGCAGGCTTATTATC GCGG TTC CCGC TTTATCCTGAAATCG glyA 240926 - 242419 + | serine hydroxymethyltransferase TERM 242 242498 - 242510 + GF 93 -5.5 -5.61596 | GAGAAAAATCTTAGA TGCCC GTC GGGTA TTTTTTTCTGAGCCT TERM 243 242965 - 242977 + GF 71 -6.3 -4.20783 | opp_overlap 242964 242965 TGACAGCAGACGAAG CCAAA GAT TTTGG TTTATTAGATGGCAT clpP1 242439 - 243017 + | ATP-dependent Clp protease proteolytic subunit dapF 242986 - 243768 + | diaminopimelate epimerase TERM 244 243826 - 243816 - f 75 -5.4 -4.75356 | overlap 243806 243817 AAATAGATTCAAAAA TCCT TAA AGGA AGGAAAGGGATTGGA TERM 245 244722 - 244744 + G 77 -10 -3.33815 | overlap 244727 GATCAGTTAAATCTT GCAAATCTTT CTG AGAGATTTGC TTCGTTGAAAGAACT TERM 246 244744 - 244769 + G 70 -9.1 -3.24245 | TTTCTGAGAGATTTG CTTCGTTGAAA GAAC TTTCGGCGAAG TTGGGTTATGACTCC CAB224 243900 - 244892 + | hypothetical protein ubiE 245589 - 244897 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 247 244932 - 244947 + g 90 -7.6 -5.32565 | overlap 244928 AAATAGTCGCGGCTC CGAAAG CGAG CTTTCG TTTTTTCCTTACTTG CAB226 246346 - 245570 - | hypothetical protein CAB227 247431 - 246319 - | hypothetical protein TERM 248 247187 - 247175 - GR 84 -7.7 -4.56597 | GGCTTCGCGTAAAAA GCACA AAA TGTGC AGTTAAATTCACAGA CAB228 249513 - 247651 - | hypothetical protein TERM 249 247743 - 247733 - G 70 -5.4 -4.35874 | opp_overlap 247733 TAATAGAAGGCAAAA GGAA TCT TTCC TTTAGGATCTTTAAG TERM 250 248224 - 248244 + g 83 -4.8 -5.23765 | gap 1, overlap 248210 248228 248229 AGAATCACTTCCTTT GATAGGGAA AAGA TTCCCT-TC TTTTTCTGTTCTTTC TERM 251 248228 - 248241 + g 79 -6.7 -4.65219 | overlap 248210 248224 248229 TCACTTCCTTTGATA GGGAA AAGA TTCCC TTCTTTTTCTGTTCT TERM 252 248982 - 248992 + g 74 -4 -5.02074 | AGCGTACGGTAATAT CAAA ACG TTTG TTTTTTACAACGTAG CAB229 249948 - 249580 - | putative regulatory protein TERM 253 250053 - 250064 + r 76 -2.2 -5.46657 | GTAGGGGTTTACGAA GGAG ATAA CTTC TTTTTTCTTGGGGTG CAB230 251170 - 250046 - | hypothetical protein CAB231 251648 - 251172 - | hypothetical protein CAB232 251828 - 251667 - | hypothetical protein CAB233 252007 - 251846 - | hypothetical protein TERM 254 251875 - 251888 + g 74 -3.8 -5.06585 | GAATAAAAACACTTT CGCT GTTTAA AGCG TTTTTGTGTGCTTTA CAB234 252790 - 252146 - | hypothetical protein TERM 255 252949 - 252967 + r 76 -3.2 -5.27769 | overlap 252953 252959 TTTAACTATTTGCCG TGCTTTTT TCT AAAAAACA TTTTTAATTTTTTAT CAB235 253543 - 252971 - | putative 3-methyladenine DNA glycosylase CAB236 255591 - 253543 - | putative ribonuclease TERM 256 255339 - 255351 + g 87 -4.8 -5.49579 | overlap 255338 CTCGAGAGATGACTT GGTG AATAC CACC TTTTCTTTTTTCTCC TERM 257 255468 - 255495 + g 72 -3.4 -5.0538 | gap 1 AAGGATATTCTTCTG GGTGGTCGGGTGT TAC AAACCCGAA-ACC TTTTTTCGCATGAAC TERM 258 255721 - 255693 - R 100 -13.3 -4.35327 | GGATTAAAAAGGAAA TTCCCTATCCCTC TTA GAGAAATAGGGAA CCAAAGATAAGATTT dnaK 257724 - 255745 - | molecular chaperone DnaK TERM 259 256225 - 256235 + g 81 -5.4 -5.14563 | TAATCCAGAGCTTGC TTCG ATA CGAA TTTTTTGCTCACGGC grpE 258325 - 257750 - | GrpE protein(hsp-70 cofactor) hrcA 259482 - 258322 - | heat-inducible transcription repressor proS 261324 - 259591 - | prolyl-tRNA synthetase CAB241 261590 - 262786 + | hypothetical protein CAB242 262893 - 263837 + | putative lipoprotein TERM 260 263999 - 263959 - g 79 -5.4 -4.83615 | opp_overlap 263959 263974 263982, overlap 263964 GAGGTCCCAGAAAAA GGTAAGGCTAACGAAGCA GTTAT TGCTTTGTTAGCCAAAGC ATTGTCTTTGCCTAA TERM 261 263994 - 263964 - g 90 -12.7 -3.49077 | opp_overlap 263959 263974 263982, overlap 263959 CCCAGAAAAAGGTAA GGCTAACGAAGCA GTTAT TGCTTTGTTAGCC AAAGCATTGTCTTTG TERM 262 263982 - 264000 + G 71 -7.5 -3.84185 | opp_overlap 263964 263959, overlap 263974 263959 TAACGAAGCAGTTAT TGCTTTG TTAGC CAAAGCA TTGTCTTTGCCTAAG CAB243 263842 - 264132 + | hypothetical protein CAB244 265160 - 264117 - | hypothetical protein CAB245 266353 - 265157 - | L,L-diaminopimelate aminotransferase TERM 263 266140 - 266154 + g 82 -8.6 -4.25074 | ACCCCAATTCTGGAC CGTATC CAC GATACG TTTTCGGATTTCCTA CAB246 266618 - 267382 + | hypothetical protein TERM 264 267423 - 267448 + F 100 -7.7 -6.10295 | gap 1, opp_overlap 267423, overlap 267411 TTTTGCAGAGAAGAA CTGCATCTT-CA TAT TGTAAGGTGCAG TTTTTTTTATATTAA CAB247 267808 - 269052 + | hypothetical protein CAB248 271137 - 269053 - | hypothetical protein TERM 265 271228 - 271209 - H 71 -5 -4.65078 | overlap 271210 AGATTTTTAAGAAAA TGCAAAGA AATG TCTTTGCG ATTGAGAATTATTTT TERM 266 271227 - 271210 - H 70 -8.5 -3.38324 | overlap 271209 GATTTTTAAGAAAAT GCAAAGA AATG TCTTTGC GATTGAGAATTATTT CAB249 271285 - 272154 + | hypothetical protein TERM 267 272451 - 272483 + G 100 -4.1 -6.21477 | TTACATATTCATCTT TTAGGTGGAAGCTCT TTG GGGGCTATTGCCTAA TTTTTTTTTACTCTT CAB250 272151 - 272483 + | hypothetical protein TERM 268 274092 - 274121 + G 76 -10.7 -2.59361 | gap 1, opp_overlap 274092, overlap 274091 274108 274110 GTTGTTCCCATGAAA CCCCTTC-GCTGCG TTG TGCAGCCGCAGGGG CTGTATTTGCTCTAT TERM 269 274121 - 274092 - g 80 -10 -3.72576 | gap 1, opp_overlap 274092 274091 274108 274110 GTTGTTCCCATGAAA CCCCTTC-GCTGC GTTGT GCAGCCGCAGGGG CTGTATTTGCTCTAT TERM 270 274108 - 274126 + G 71 -6.7 -3.97308 | opp_overlap 274092, overlap 274092 274091 274110 CCCTTCGCTGCGTTG TGCAGCC GCAGG GGCTGTA TTTGCTCTATTTAAG CAB251 272528 - 274144 + | hypothetical protein TERM 271 274420 - 274442 + F 79 -5 -5.13521 | overlap 274421 TATTTTGTTTGTTAG TTTCTTTTTA AAA TAAAAAGGAG TTTTTTCAATAATTT TERM 272 275516 - 275527 + G 74 -4.4 -4.99568 | overlap 275511 CAGCCATCCTTGCCG GGAT CGTC ATCC TTTTGTTTAATCTTA CAB252 274747 - 276081 + | putative sodium symporter TERM 273 276132 - 276161 + T 100 -18.1 -3.76402 | CACATGTTGTCTGTG CTCACCTTCTTGT TTGC ACAAGAAGGTGAG TTTCGTCGCTAAGGT CAB253 276370 - 276170 - | putative inner membrane protein CAB255 280766 - 277449 - | hypothetical protein CAB256 280899 - 281663 + | membrane transport protein, solute binding component CAB257 281837 - 282508 + | putative inner membrane protein TERM 274 282519 - 282529 + F 76 -6.8 -4.40123 | TCTGAACTTATTCCC GCAG AAT CTGC TTCTTCTTTTTCTTA CAB258 282595 - 283416 + | putative hydrolase TERM 275 283611 - 283625 + G 70 -8.6 -3.27786 | opp_overlap 283610 ATCTTGTGAGATTAC CGTGTT AGA AACACG TTCATGGATTTTGCG CAB259 283420 - 284808 + | putative GTP-binding protein TERM 276 285708 - 285720 + G 76 -3.3 -5.20154 | opp_overlap 285700 285709, overlap 285709 GGATGAACCGGAAGT ACTCC CGG GGAGA TTTTTTAGATTGTGT CAB260 284918 - 286183 + | hypothetical protein TERM 277 286699 - 286685 - g 93 -2.1 -6.32017 | AAGAAAGAAAAAAAA CAGAA ATTTA CTCTG CGCTATCTTCGTTAT CAB261 286180 - 287178 + | hypothetical protein TERM 278 288810 - 288791 - g 75 -2.8 -5.24129 | gap 1, overlap 288776 288793 GCCTTTTACAAAAAA TGCCC-GGC GAT ACCTGGACA AAGTTTGCTCATATG TERM 279 288861 - 288871 + G 75 -5.4 -4.82901 | CATATGCCAACCAGG GAAG AAA CTTC TTTTTATGGGCGGGG glgB 287191 - 289356 + | glycogen branching enzyme CAB263 289494 - 291275 + | putative inner membrane protein TERM 280 291784 - 291768 - g 84 -6.6 -4.87803 | overlap 291779 TATTCGGAAAGAAAA CACAGA AGGAA TCTGTG ACAGAGATTTCTGGT TERM 281 292908 - 292920 + G 77 -6.3 -4.63218 | opp_overlap 292908 TGGTGTATGAGGAGA TTCCT GTG AGGAA TTTTCTTCCAAGAAC CAB264 291461 - 293500 + | hypothetical protein TERM 282 293509 - 293537 + T 100 -11.1 -4.84918 | opp_overlap 293509 293512 TAAATAAGGACTTAA CAAGGCTATAGAG TTG TTCTACAGCCTTG TTTTCTATTTCTAAA TERM 283 293537 - 293509 - T 90 -12.6 -3.17492 | opp_overlap 293509, overlap 293512 TAAATAAGGACTTAA CAAGGCTATAGA GTTGT TCTACAGCCTTG TTTTCTATTTCTAAA TERM 284 293534 - 293512 - T 74 -8.5 -3.71255 | opp_overlap 293509, overlap 293509 ATAAGGACTTAACAA GGCTATAGA GTTGT TCTACAGCC TTGTTTTCTATTTCT pmp3E 296514 - 293548 - | polymorphic outer membrane lipoprotein TERM 285 294860 - 294873 + g 71 -3.7 -4.84359 | opp_overlap 294849 TAAATCCAAATTTTT GGAGC TTTA GCACC TTTTTGTAAAAGTGA TERM 286 295329 - 295339 + g 74 -4 -5.06414 | TAGGGTCATAGAACT TTAC AGC GTAA TTTTTCTTGGCGCCA TERM 287 295673 - 295649 - G 72 -9.3 -3.31322 | opp_overlap 295649 295653 295655 295663, overlap 295653 TTTAAGTCTGTACAA GTAACGGCTCC TCC GGAGCTATTAC TCCCTTTAGTGTCAT TERM 288 295655 - 295667 + g 70 -9.1 -3.18776 | opp_overlap 295653 295649, overlap 295653 295649 295663 TCTGTACAAGTAACG GCTCC TCC GGAGC TATTACTCCCTTTAG TERM 289 295963 - 295953 - G 73 -6.8 -4.18488 | opp_overlap 295953 ATTCATCTGAAGAAA TGGC CCC GCCA TTCATTTGTGCTATA pmp4E 299397 - 296536 - | polymorphic outer membrane protein TERM 290 298961 - 298971 + g 70 -5.4 -4.43576 | opp_overlap 298943 298961 GCATTATTGATAAAG CAAC ACC GTTG TTTATTCTCTGTAAT TERM 291 299550 - 299608 + r 100 -12 -4.56791 | opp_overlap 299568 299602, overlap 299568 TCATTTGAGATAGCG TGCCGGCAGAATAAAAAAGTTTGTTT TGGGAAC AAACAAACTTTTTTAGACAGCCTGCA TTTATATTTTTCAAT TERM 292 299586 - 299568 - R 91 -6.1 -5.55769 | opp_overlap 299550 299568 CGGCAGAATAAAAAA GTTTGTT TTGGG AACAAAC AAACTTTTTTAGACA TERM 293 299568 - 299590 + r 76 -5 -5.00884 | opp_overlap 299568, overlap 299550 CGGCAGAATAAAAAA GTTTGTTT TGGGAAC AAACAAAC TTTTTTAGACAGCCT pmp5E 300743 - 299664 - | polymorphic outer membrane protein TERM 294 300885 - 300895 + r 70 -2.6 -5.14682 | opp_overlap 300885 AACATTTTGGGAATA TATA GAT TATA TTTTGTTTATTCTCA TERM 295 301187 - 301150 - R 79 -5 -5.12617 | overlap 301151 GAAGGAGTGAAAAAA GGAGAGAAATTCCCCT AGGGCA AAGAAAATTTCTCTCG GTAGTAGATTTAGAA TERM 296 301186 - 301151 - R 74 -8.5 -3.66486 | overlap 301150 AAGGAGTGAAAAAAG GAGAGAAATTCCCCT AGGGCA AAGAAAATTTCTCTC GGTAGTAGATTTAGA pmp6H 304139 - 301197 - | polymorphic outer membrane protein TERM 297 301544 - 301534 - G 79 -6.8 -4.57569 | opp_overlap 301533 CGACCTCGGGAAAAA CTCC TTG GGAG ATATCCTTGTTCTGC TERM 298 302766 - 302782 + g 73 -7.3 -4.02736 | TGCAGGATTTAACTT CTCTGAT ATG GTCAGAG TTTCTGATGTAAATT TERM 299 303164 - 303186 + g 74 -4.8 -4.79826 | opp_overlap 303161, overlap 303182 CTTTGGCACAAATGG CTCCACCA TTTTCTT TGGCGGAG TTTTTCGTGATATAT TERM 300 303673 - 303658 - G 70 -3.3 -4.89852 | GCAGAGCCACAAAAA CAGTT TACCGT AACTG AAGTAGGCACAGATT TERM 301 304144 - 304133 - G 70 -5.8 -4.4572 | AAGATCTTAAAGAAA GAGG CATG CCTC AACCCTATCGTTAGT pmp7G 307239 - 304165 - | polymorphic outer membrane protein TERM 302 305595 - 305573 - G 95 -14.2 -3.25896 | overlap 305571 GCAGCAGTCACAACA GAGGCAGCTG CTG CAACTGCCTC ACTAGAAGTAGCATA TERM 303 307026 - 307009 - G 75 -5.6 -4.74504 | AGCGGAATTGAAAAA GCAACT TGAAGG AGTTGC CGCCATGGAGTTGTC TERM 304 307544 - 307530 - R 74 -5 -4.72007 | opp_overlap 307532, overlap 307532 GCGCATCAAAATAAA CATTGG CTA CCAATA TCTCCTGAATAGTAT TERM 305 309906 - 309918 + r 76 -6.3 -4.66537 | AGAGTTGGAGGGTGT TGTAG CTG CTACA TTTTGTATTAGAACG TERM 306 310068 - 310031 - R 82 -11.5 -2.85668 | gap 1, overlap 310043 310045 TATCCGCAGAGGAGA GTGTTTTTAACACAGCAG CAT CTGCTGTGGC-AAAACAC ATATAGGACATAGCA TERM 307 310057 - 310043 - R 76 -10 -3.02263 | overlap 310031 310045 AGAGTGTTTTTAACA CAGCAG CAT CTGCTG TGGCAAAACACATAT TERM 308 310739 - 310761 + r 79 -7.1 -4.38116 | gap 1, opp_overlap 310735, overlap 310740 ACTTTTACAAATGGC G-TGGCCTTT TGCA AAAGGCCATC TTTACTTTTTATAGG TERM 309 310740 - 310759 + r 88 -10.8 -3.7798 | opp_overlap 310735, overlap 310739 CTTTTACAAATGGCG TGGCCTTT TGCA AAAGGCCA TCTTTACTTTTTATA TERM 310 311363 - 311386 + r 88 -8.2 -4.54727 | GGAATGTACCCTAAG GGTTGCCAAT TTAA ATTCGCAACC TTTTCATTTCCAGAG TERM 311 313081 - 313052 - R 75 -9.3 -3.14132 | opp_overlap 313033 TGGCTGCTTTAGCAA CTGCGGATGTTAC AGAG GTAGCATCCGGAG ACGAATCAGCGAATA pmp10G 315806 - 313284 - | polymorphic outer membrane protein TERM 312 313770 - 313786 + g 78 -3 -5.37171 | gap 1 AGCTACGGAGTAATT CGACCAG TTGC CTG-TCG TTTTTGTTTGATCTT TERM 313 314062 - 314034 - G 70 -5.4 -4.43221 | gap 1, opp_overlap 314032 314030 314034 314035, overlap 314035 AAAGAGTTGAGAAAA TGCTG-CAGAAAA TACA TTTTCTGACAGCG TATGTTTATTTATGC TERM 314 314061 - 314035 - G 70 -8.9 -3.24848 | gap 1, opp_overlap 314035 314034 314032 314030, overlap 314034 AAGAGTTGAGAAAAT GCTG-CAGAAAA TACA TTTTCTGACAGC GTATGTTTATTTATG TERM 315 314404 - 314430 + g 84 -8 -4.66938 | TCTATAGTCCAACTG CCTTGATATCCA CGA TGGGCGTCAAGG TTTTCTCTTACAGAT TERM 316 315925 - 315959 + r 100 -13.6 -3.04144 | TAGTTGCTATTCCTC ATGGACACCCCTGCCT TAG AGGTAGGGGTGTACAC TGTTAAAAATGCACC pmp11G 318511 - 315962 - | polymorphic outer membrane protein TERM 317 316030 - 316007 - G 70 -8.8 -3.32946 | overlap 316005 GTTGTAACTATAAGA GGAACGGCGG AATT CCACAGTTCC TTGCGCAAAGATATT TERM 318 318564 - 318554 - R 75 -5.4 -4.79053 | opp_overlap 318554 318550 318548 AAAGAGGAAAATAAA GCAA GAG TTGC TGTATCTTGATGAGG TERM 319 318838 - 318809 - R 70 -8.5 -3.36968 | overlap 318810 GAGTCAAGGTTATAA GGCCCTACCCCGT GGGA ACGGGGTAGGAGA GGTGGATGAGATTAG TERM 320 318837 - 318810 - R 83 -12 -2.6186 | overlap 318809 AGTCAAGGTTATAAG GCCCTACCCCGT GGGA ACGGGGTAGGAG AGGTGGATGAGATTA TERM 321 320882 - 320895 + r 80 -6.7 -4.82901 | GGATAGCCCCACCTT CTGCT GTTG AGCAG TTTTTATGGAAGACA TERM 322 321031 - 321004 - R 75 -5.6 -4.75288 | opp_overlap 321010 GCACATGAAAATAAA GAAAATCCTGAG ATGC CTAAGGTTTTTC CTTGACCTTGAACAT TERM 323 321490 - 321461 - R 83 -12.1 -2.74244 | overlap 321458 GAGTAGACAAAGGGA GGCCCTGCTCCGT GTCT ACGGAGCAGGGGA GGTGGATGAGATTAG pmp13G 324045 - 321502 - | polymorphic outer membrane protein TERM 324 324036 - 324025 - G 75 -5.8 -4.82667 | opp_overlap 324025 324024 CGAGGATATTAAAAA CCAG TAAA CTGG ATGTTTCATAAATTC TERM 325 324158 - 324137 - R 100 -15.9 -3.63276 | CTAGAATAAGGAGAA CCCTGCCCA GAGC TGGGCAGGG GGGAGCTTTTTAGAA pmp14G 326948 - 324168 - | polymorphic outer membrane protein TERM 326 324426 - 324440 + g 86 -10 -3.98009 | ATCATAAGCACTTCT CTCTCC ATA GGAGAG TTTCTCAAATTTTAT TERM 327 325154 - 325174 + g 87 -8.3 -4.64676 | GCGGAGCACGACGTT CAGGATTTG GAA CATATCCTG TTTTATTCCAGGTAA pmp15G 331228 - 327092 - | polymorphic outer membrane protein TERM 328 328642 - 328614 - G 79 -11.2 -2.65264 | gap 1 GCAGGAGTCACATTA GTGAT-GATGGAG GTTC CTCCATCCATCAC GATTAAAGAGCCTTC TERM 329 329544 - 329554 + g 79 -5.4 -4.86033 | AAACAGGGATCAGGA GAAG GTT CTTC TTTTTGTGCGACTTT TERM 330 330421 - 330456 + g 81 -7.6 -4.54727 | gap 1, overlap 330397 AACTTTTGTTAGTTT CACCATTGGCTTGCGAT GCT ACCGC-AGTCGGTGGTG TTTTGGTTTCAGGAC TERM 331 331351 - 331316 - R 100 -9.2 -4.99134 | gap 1, opp_overlap 331318, overlap 331318 ATTGGAAATGAAAAA TATCAAAAGCTACG-GA AAA TCTCGCAGCTTTTGATT TTTCTCTTTAACTTC TERM 332 331318 - 331349 + r 100 -9.6 -5.20783 | gap 1, opp_overlap 331318 331316 TGGAAATGAAAAATA TCAAAAGCTACG-GA AAA TCTCGCAGCTTTTGA TTTTTCTCTTTAACT TERM 333 331349 - 331318 - R 91 -11.8 -4.11472 | gap 1, opp_overlap 331318, overlap 331316 TGGAAATGAAAAATA TCAAAAGCTACG-GA AAA TCTCGCAGCTTTTGA TTTTTCTCTTTAACT CAB284 331698 - 331423 - | putative inner membrane protein gatC 331899 - 332201 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 334 332932 - 332942 + G 81 -5.4 -5.02476 | opp_overlap 332923 332932 ATGATAGAGATGCAA CTTC TCA GAAG TTTTTTACAGGATCT gatA 332223 - 333698 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 335 334199 - 334218 + G 73 -7.8 -3.90574 | TTTTGTGCTGATGAT GCTGTTGC TTAT GCCACAGC TTTGGTATCCTTATT gatB 333698 - 335161 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 336 335251 - 335212 - T 77 -10.2 -3.19192 | gap 1, opp_overlap 335214 335217, overlap 335216 GCGTATCTAAGGGAA CGGAGGCTCTTTTGACGTT TTT AACGTCAAAAGAG-CTCTT TTATTTTGCCTACGT TERM 337 335214 - 335249 + T 100 -17.2 -5.10933 | gap 1, opp_overlap 335212 335216, overlap 335217 GTATCTAAGGGAACG GAGGCTCTTTTGACGTT TTT AACGTCAAAAGAG-CTC TTTTATTTTGCCTAC TERM 338 335248 - 335216 - T 100 -16.5 -2.57192 | opp_overlap 335214 335217, overlap 335212 ATCTAAGGGAACGGA GGCTCTTTTGACGTT TTT AACGTCAAAAGAGCT CTTTTATTTTGCCTA TERM 339 335217 - 335247 + T 100 -20 -4.17301 | opp_overlap 335216 335212, overlap 335214 TCTAAGGGAACGGAG GCTCTTTTGACGTT TTT AACGTCAAAAGAGC TCTTTTATTTTGCCT CAB288 336508 - 335282 - | putative inner membrane protein TERM 340 335710 - 335720 + g 79 -6.8 -4.54449 | ATGTATGATGCAGCA CTCC TTG GGAG TTTTGTCTGACGTAT TERM 341 336660 - 336650 - R 72 -4 -4.92757 | opp_overlap 336650 CTAGTAAGAACAAAA TGAA AAA TTCA ATATTTTCGTTTTCT CAB289 337244 - 336681 - | putative inner membrane protein CAB290 338355 - 337405 - | hypothetical protein rnhC 339475 - 338573 - | ribonuclease HIII TERM 342 338805 - 338838 + g 100 -3.8 -6.13503 | ACGATATCTTGCTCA GCACGGACTTTTTG AATTAC CGAGATATCCGTGC TTTTTTTTCTTAGTG TERM 343 339699 - 339716 + H 74 -8.5 -3.72363 | opp_overlap 339697 339699 AATAAGGCGAGAAGA CTCTAGA AAGA TCTAGAG TTTAGCATTTAGGTA CAB292 339749 - 340180 + | hypothetical protein CAB293 341578 - 340250 - | hypothetical protein TERM 344 341609 - 341634 + r 75 -9.1 -3.50853 | opp_overlap 341616, overlap 341616 ATAATAAAAGAGGGG GAGCTAAGATG CTTA CATCTTATCTC TTGTGATTAAAACAG CAB294 343205 - 341877 - | hypothetical protein TERM 345 342573 - 342585 + g 80 -6.3 -4.75063 | opp_overlap 342573, overlap 342566 TGAGATGTTGATAGA CTCTT CTA AAGAG TTTTTCACATTTTCT CAB295 343745 - 343521 - | hypothetical protein TERM 346 344562 - 344574 + G 70 -2.7 -5.17576 | overlap 344570 ACGAGAATGTATAGA TTTGG GGA TCAAA TTTTTTGGCTTAGTA CAB296 343864 - 344730 + | hypothetical protein TERM 347 344750 - 344793 + F 75 -9.7 -2.90208 | gap 1, opp_overlap 344750 344761, overlap 344749 344781 ATTTACTTGAAACAA GCCTTATAGTATCCTCTCTG TCCCC CTGAGAGGGTGCT-TAGGGC CCTTTTTTAGTTTTA TERM 348 344781 - 344795 + F 79 -3.4 -5.46698 | opp_overlap 344761 344750, overlap 344750 344749 TCTGTCCCCCTGAGA GGGTGC TTA GGGCCC TTTTTTAGTTTTACG TERM 349 345085 - 345063 - g 72 -8.4 -3.53012 | opp_overlap 345066 345068 345076, overlap 345067 345068 CTCGTCTTCCCTAAA CAAATGCTGG GAA CCAGCTCTTG GTTTAACGAGCGTTT TERM 350 345081 - 345067 - g 70 -5.6 -4.41348 | opp_overlap 345066 345068 345076, overlap 345063 345068 TCTTCCCTAAACAAA TGCTGG GAA CCAGCT CTTGGTTTAACGAGC TERM 351 345080 - 345068 - g 70 -9.1 -3.24488 | opp_overlap 345066 345068 345076, overlap 345067 345063 CTTCCCTAAACAAAT GCTGG GAA CCAGC TCTTGGTTTAACGAG TERM 352 345068 - 345080 + G 72 -9.1 -3.33151 | opp_overlap 345068 345067 345063, overlap 345066 345076 CTTCCCTAAACAAAT GCTGG GAA CCAGC TCTTGGTTTAACGAG CAB297 344865 - 345734 + | hypothetical protein TERM 353 345792 - 345747 - f 70 -3.5 -5.06451 | gap 2, opp_overlap 345758, overlap 345748 345758 TAGCATCTTAAAAAA GTTAGGGAA-AAGCCCT-TAG AATAGA CTACAGGGCTGATTCCCTAAA ATTGCATTCTTTCAA TERM 354 348115 - 348129 + G 80 -10 -3.72027 | opp_overlap 348112 CGTGAGAAAATTTTA TCCTGC TTA GCAGGA TTGTTCCTGCCCCAT CAB298 346225 - 348327 + | hypothetical protein CAB299 348439 - 349524 + | hypothetical protein ksgA 349533 - 350369 + | dimethyladenosine transferase dxs 352762 - 350828 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 355 352226 - 352252 + g 70 -8.2 -3.66999 | opp_overlap 352219, overlap 352221 352227 TTTAGAAATCGACAT GTTATTGTCATT TAA AATGACAATAAA TTTAGATAGATCCGT TERM 356 352227 - 352251 + g 81 -11.7 -2.79878 | opp_overlap 352219, overlap 352221 352226 TTAGAAATCGACATG TTATTGTCATT TAA AATGACAATAA ATTTAGATAGATCCG CAB302 353013 - 352759 - | hypothetical protein TERM 357 352901 - 352886 - G 76 -9 -3.66646 | AAGATCTCATCTAAA CCCTGA TGTA TCAGGG AAAACATTTTTTCAT xseB 353255 - 353028 - | exodeoxyribonuclease VII small subunit TERM 358 353199 - 353213 + g 70 -8.6 -3.39936 | CGAAGGTTGATTCAT GAGATC TAC GATCTC TTCTAACCTTTCCAT xseA 354926 - 353259 - | exodeoxyribonuclease VII large subunit tpiA 355057 - 355821 + | triosephosphate isomerase secG 356095 - 356409 + | preprotein translocase subunit SecG TERM 359 356396 - 356425 + F 73 -8.7 -3.42366 | opp_overlap 356396 356397, overlap 356389 356397 CAGATGGAGAAGAAA TCTCTAGCGAA TAGAAAGC TTCGCTAGAGG TTATCGACTTTTACC TERM 360 356425 - 356396 - f 73 -6.5 -4.34488 | opp_overlap 356396 356389 356397, overlap 356397 CAGATGGAGAAGAAA TCTCTAGCGAA TAGAAAGC TTCGCTAGAGG TTATCGACTTTTACC TERM 361 356424 - 356397 - f 77 -10 -3.1997 | opp_overlap 356396 356389 356397, overlap 356396 AGATGGAGAAGAAAT CTCTAGCGAA TAGAAAGC TTCGCTAGAG GTTATCGACTTTTAC TERM 362 356397 - 356424 + F 74 -10 -2.64938 | opp_overlap 356397 356396, overlap 356396 356389 AGATGGAGAAGAAAT CTCTAGCGAA TAGAAAGC TTCGCTAGAG GTTATCGACTTTTAC def 356666 - 357220 + | peptide deformylase CAB308 359393 - 357297 - | putative lipoprotein TERM 363 357343 - 357364 + g 87 -8.7 -4.50976 | opp_overlap 357345 357348, overlap 357345 AGTTTCAGGTAAAAG AAGAAGCGG TTAT CCGCTTCTC TTTTCTCATATACCG TERM 364 357345 - 357362 + g 90 -11.3 -3.8637 | opp_overlap 357345 357348, overlap 357343 TTTCAGGTAAAAGAA GAAGCGG TTAT CCGCTTC TCTTTTCTCATATAC TERM 365 357362 - 357345 - G 93 -11.3 -4.21812 | opp_overlap 357343 357345, overlap 357348 TTTCAGGTAAAAGAA GAAGCGG TTAT CCGCTTC TCTTTTCTCATATAC TERM 366 357359 - 357348 - G 76 -7.2 -4.22475 | opp_overlap 357345 357343, overlap 357345 CAGGTAAAAGAAGAA GCGG TTAT CCGC TTCTCTTTTCTCATA TERM 367 359288 - 359298 + g 85 -5.4 -5.27938 | CTTTAAAATGGCTGA GGTA GGA TACC TTTTTCTTTGCAGCT CAB309 361110 - 359404 - | hypothetical protein TERM 368 359827 - 359803 - G 87 -8.5 -4.60255 | opp_overlap 359802 359803, overlap 359808 AGAATGGGCTAAAAA CGAGATGGCTT TGG AAGCCAGCGCG GTTTTCTGACTTAAG TERM 369 359803 - 359827 + g 70 -8.5 -3.27808 | opp_overlap 359803 359808, overlap 359802 AGAATGGGCTAAAAA CGAGATGGCTT TGG AAGCCAGCGCG GTTTTCTGACTTAAG TERM 370 360442 - 360453 + g 85 -5.8 -5.19251 | TAAATGCCGGAGTGT CGGT AAGA ACCG TTTTTGTTGGTATTC maf 361682 - 361092 - | Maf-like protein CAB311 363325 - 361724 - | putative ABC transporter, ATP-binding component TERM 371 363109 - 363121 + g 77 -7.7 -4.20516 | TATCTATATTTTGGC GTAGG ATT CCTAC TTTCTTAGGTAAAGA xerC 364304 - 363366 - | site-specific tyrosine recombinase XerC TERM 372 363719 - 363731 + g 87 -3.4 -5.72207 | CATGAGGAGTTATAG GAAC AAGAC GTTC TTTTTTTCCTTTCCC TERM 373 363992 - 364015 + g 74 -6 -4.45544 | CAGGGAGAATACGCT GTTTCACACA ATAC TGTGAGAAGC TTTTAATTGCTGAAA TERM 374 364120 - 364134 + g 75 -10 -3.12162 | opp_overlap 364120, overlap 364118 364116 364112 GTGAGTAGAGAAAAA GGAAGC TCA GCTTCC TGTCGTTCTTTTGTG TERM 375 364134 - 364120 - G 93 -10 -5.00895 | opp_overlap 364120 364118 364116 364112 GTGAGTAGAGAAAAA GGAAGC TCA GCTTCC TGTCGTTCTTTTGTG TERM 376 364334 - 364347 + r 76 -6.7 -4.41348 | opp_overlap 364333 CTTTTTCCGAAGTAT TCCCT ATAT AGGGA TTTATTTAGAAGAAG CAB313 365269 - 364349 - | ribonuclease Z CAB314 366043 - 365372 - | putative serine rich exported protein TERM 377 366130 - 366173 + r 89 -12.1 -3.30619 | opp_overlap 366135, overlap 366135 TTTTTTTTGTGTGAT GATAATTTAGAGCCGTT AATTGAAAAA AACGGTTCTAAATTATC TTGTGAGAGCTAATT CAB315 368639 - 366183 - | putative serine protease TERM 378 366467 - 366446 - G 89 -9.5 -4.20797 | CTAAAAGCAGAGAAA GCAACGATG TGAC CATCGTTAC ACCTGCTGAAGGGCC TERM 379 366778 - 366767 - G 76 -4.4 -5.0538 | GGTCACTGGAAAAAA TAGG CTTG CCTA GGTAGTCCTGAAGGT TERM 380 368469 - 368443 - G 88 -11.6 -3.63837 | overlap 368444 AGAACTTCGTAATAA GGGCCCGATTCT ATA AGAATCGGAGCC GCCATACCCGGGAAA TERM 381 368469 - 368444 - G 83 -12.7 -2.7782 | gap 1, overlap 368443 GAACTTCGTAATAAG GGC-CCGATTCT ATA AGAATCGGAGCC GCCATACCCGGGAAA CAB316 369284 - 369925 + | hypothetical protein rpsU 370125 - 370301 + | 30S ribosomal protein S21 TERM 382 371473 - 371443 - g 74 -4.8 -4.72556 | opp_overlap 371452 GGAAAAAGCAGAAAA TTTCCCTAAGAAAC GCA GTTTCTTGGATAAA ATTAAGGGTTTTTTT dnaJ 370331 - 371506 + | molecular chaperone protein CAB319 371541 - 373577 + | putative oxidoreductase TERM 383 374634 - 374650 + TF 70 -6.7 -4.07568 | GATGGAATACGGCTA CTTTATT TAT AATAAAG TTTTGACAGGCAGCA CAB322 376146 - 374848 - | membrane protein TERM 384 376677 - 376687 + GH 72 -3.2 -5.01535 | AATTGCGCGTCTTTA GGGA TTT TTCC TTTTTGTGGTTATGA CAB323 376116 - 376907 + | hypothetical protein CAB324 376900 - 377241 + | putative phosphotransferase system, phosphocarrier protein CAB325 377242 - 378942 + | putative phosphoenolpyruvate-protein phosphotransferase CAB326 379229 - 378939 - | hypothetical protein dnaX 380565 - 379234 - | DNA polymerase III subunits gamma and tau TERM 385 380177 - 380189 + g 74 -4.9 -4.76193 | AGCATATGGACTTCA TCTAT GAT ATAGA TTTTATATTGTGATT TERM 386 381432 - 381416 - g 100 -5.1 -5.75342 | opp_overlap 381416, overlap 381418 GGTGGTTAAAAAAAA CTCAAGA TTT TCTTGGG TCTGTAGGATTTATA TERM 387 382336 - 382362 + G 76 -7.2 -4.19024 | overlap 382327 GTTGCCTCTATCACG GCTTTCCGTGCA GAT TGCTTGGGGAGC TTTGTCTATAGTTTA CAB328 381064 - 383160 + | putative inner membrane protein CAB329 383634 - 383143 - | putative inner membrane protein CAB330 384426 - 383995 - | putative inner membrane protein CAB331 384988 - 384587 - | putative inner membrane protein CAB332 385822 - 385073 - | porphobilinogen deaminase radA 387167 - 385800 - | DNA repair protein RadA TERM 388 386188 - 386175 - GR 83 -5.3 -5.19251 | TAAGAGTAATAAAAA TCGAT TTTG ATCGA ATCCTGAGGTTTTCC TERM 389 387128 - 387142 + gr 70 -2.9 -5.1244 | GAGTGCCGCATTCAT TACAA GTCCA TTGTA TTTTTATCTTCGTAG rnc 387840 - 387127 - | ribonuclease III CAB335 387960 - 388424 + | hypothetical protein TERM 390 389240 - 389218 - g 77 -10.6 -2.79749 | opp_overlap 389207, overlap 389217 TATCCCGAAGATAAT CGGATTTCTG GAC CAGCAATCCG TGTCAGCTATTCTCC TERM 391 389347 - 389335 - g 71 -4.8 -4.57341 | AACCTTGTCGAAAAA CAGG CGATT CCTG ATGGCGATTTCCCTA TERM 392 389862 - 389872 + G 73 -6.8 -4.23007 | CCAAGGAAAAACTCT TCGC GAT GCGA TTTTAGACTTATATG TERM 393 389950 - 389915 - g 83 -7.1 -4.71828 | gap 1, opp_overlap 389917, overlap 389917 ATTTCATGAATAAAA CACTTTCGTTGTCCTT TGAAC AAGGACAA-GAAAGTC TCATGAAGTCTCATA TERM 394 389948 - 389917 - g 86 -9.7 -3.97413 | gap 1, opp_overlap 389917, overlap 389915 TTCATGAATAAAACA CTTTCGTTGTCCTT TGAAC AAGGACAA-GAAAG TCTCATGAAGTCTCA TERM 395 389917 - 389948 + G 71 -9.7 -2.80443 | gap 1, opp_overlap 389915 389917 TTCATGAATAAAACA CTTTCGTTGTCCTT TGAAC AAGGACAA-GAAAG TCTCATGAAGTCTCA CAB336 388519 - 390324 + | putative phosphomannomutase CAB337 390444 - 391067 + | superoxide dismutase CAB338 391148 - 392074 + | acetyl-CoA carboxylase subunit beta TERM 396 392188 - 392164 - g 70 -9.3 -3.21395 | overlap 392162 ATCTCTTCCAGAATA TGCTACCGAAG GGG CTTCAGGAGCA GACCTTCGAGCGAAT dut 392117 - 392560 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 397 392655 - 392644 - g 73 -5.8 -4.63218 | overlap 392654 TGTTTTTGAATAAAA CCTC ACGA GAGG AGATTCTCCAAGATC CAB339 392562 - 393038 + | PTS system, IIA component CAB340 393043 - 393723 + | PTS system, IIA component CAB341 393822 - 395228 + | hypothetical protein TERM 398 395260 - 395287 + F 91 -5.6 -5.92337 | opp_overlap 395260 395262, overlap 395262 CAGGTATAGACGTAA GAGACAGAACTT CATT GGGTTCTGTCTA TTTTTTTTCGTCTAT TERM 399 395262 - 395285 + F 88 -8.2 -4.59226 | opp_overlap 395262 395260, overlap 395260 GGTATAGACGTAAGA GACAGAACTT CATT GGGTTCTGTC TATTTTTTTTCGTCT TERM 400 395363 - 395384 + F 74 -3.9 -5.098 | TTAATTCCGGTTGGA TAATTAGTT ATAT AATTAATTA TTTCTTTTATTTTTA TERM 401 396432 - 396420 - g 75 -7.7 -4.03174 | AAACCGATCAAAGAA TGACC TTG GGTCA TAAAGATTTTTATGA CAB342 395408 - 397138 + | putative inner membrane protein TERM 402 397154 - 397178 + T 70 -5.7 -4.48713 | AGCATGAGAAAGAAA GTATCCTGTTA GTG TACCGGGGTAC TTTGTTGTTCGTAAG CAB343 397776 - 397162 - | putative inner membrane protein CAB344 398390 - 397773 - | putative inner membrane protein TERM 403 398956 - 398944 - g 70 -3.3 -4.95155 | GTGACATGACAAAAA GAGAG GTA CGCTC CATAGCTGCCCAAGC trmU 398427 - 399515 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase clpC 402030 - 399493 - | negative regulator of genetic competence clpc/mecb TERM 404 401409 - 401390 - G 71 -6.4 -4.26292 | AAGATTAAAATCAAA CGTTCAAC TTCC GTAGAACG GCCAATCACAGGATC TERM 405 402428 - 402443 + G 79 -5.4 -4.92756 | gap 1 GGATGCCGCTATCCG CCCTACC GGA GG-AGGG TTTGTTTTTCATCAT CAB347 402198 - 402932 + | hypothetical protein CAB348 402923 - 404353 + | exported protein CAB349 404474 - 406546 + | putative inner membrane protein CAB350 406546 - 406887 + | glycine cleavage system protein H TERM 406 406915 - 406925 + F 70 -2.6 -5.09426 | TTCAAAAAAATATTG TATA GTT TATA TTTTTTGAACTTGGA TERM 407 406989 - 406975 - f 75 -7.2 -4.3534 | TTTGAAGGAGTAAAA TCTTTC CCT GAAAGA TAAAAAAAACAAGTT CAB351 407009 - 407323 + | putative inner membrane protein TERM 408 407557 - 407586 + G 75 -10.1 -3.24161 | overlap 407555 407558 CTTGCTGTACCCTTG TGTGTATCGCTAT GTTT ATAGCGAAACACG TGTTATGCCAATTTC TERM 409 407558 - 407585 + G 79 -11.4 -2.54015 | overlap 407557 407555 TTGCTGTACCCTTGT GTGTATCGCTAT GTTT ATAGCGAAACAC GTGTTATGCCAATTT CAB351A 407313 - 407645 + | putative inner membrane protein nqrE 408440 - 407646 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 410 407692 - 407714 + g 95 -6.2 -5.68039 | GTTTTGGTCTTACCA GTACGCTGCG GAG CTGAGCGTAC TTTTTTTATAGGTTT nqrD 409086 - 408445 - | Na(+)-translocating NADH-quinone reductase subunit D nqrC 410035 - 409073 - | Na(+)-translocating NADH-quinone reductase subunit C nqrB 411550 - 410039 - | Na(+)-translocating NADH-quinone reductase subunit B TERM 411 412186 - 412199 + r 76 -3.1 -5.38054 | overlap 412165 TGCTCCACAGCCAGC GATTC TTAT GAGTC TTTTTCTTTCTGAGA CAB357 412784 - 412191 - | hypothetical protein dnaA 414153 - 412801 - | chromosomal replication initiation protein TERM 412 414034 - 414070 + g 88 -11.1 -4.08064 | TAAACGGATCTTTTC CTGGGTTTCTTCTAT AATTTGA ATAGGAGAAATCCAG TTTTCAAAAGCCGTT TERM 413 414237 - 414257 + r 74 -4.8 -4.82901 | GCCAATGTACCATTG CTGTTGAT AAGCA ATCAATAG TTTTTCTGCAAAAAA CAB359 414777 - 414346 - | hypothetical protein CAB360 415326 - 414781 - | hypothetical protein mraW 415500 - 416396 + | S-adenosyl-methyltransferase MraW CAB361A 416393 - 416680 + | hypothetical protein TERM 414 417043 - 417030 - g 76 -3.1 -5.252 | opp_overlap 417040 GAGTTTGATAAAAAA TCTCG CTAT CGAAA GTTATTTCTTTGGTT CAB362 416667 - 418616 + | penicillin-binding protein TERM 415 418885 - 418895 + F 85 -4 -5.64873 | GTGCGGGCAAGAGTT TCTA AAA TAGA TTTTTTATTATTCAA TERM 416 420672 - 420647 - g 79 -5.5 -4.85782 | overlap 420648 CTTTTTAAAAAGAAA TTTTTCTATCG AAAT CGACAGAAAAC AAGCAATTACATATG TERM 417 420671 - 420648 - g 74 -9 -3.50746 | overlap 420647 TTTTTAAAAAGAAAT TTTTCTATCG AAAT CGACAGAAAA CAAGCAATTACATAT murE 419373 - 420824 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase CAB364 420817 - 421536 + | N-acetylmuramoyl-L-alanine amidase ihfA 421924 - 422226 + | integration host factor alpha-subunit TERM 418 422931 - 422945 + G 71 -4.2 -5.0065 | opp_overlap 422926 422931 TTGGATGCAACGAAC GCGG TCGGCAT CCGC TTTTGTTTCTGGATC TERM 419 423500 - 423511 + G 70 -5.8 -4.40963 | TTCCCTATCAAGACG CCGA GGTC TCGG TTGTTTTTGAAAAAT CAB366 422353 - 423537 + | hypothetical protein accA 423642 - 424616 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 420 424630 - 424620 - gT 70 -3.2 -4.87665 | CCTGAGGCATAAAAA GCAT CTC ACGC TATTAGGTTTTTCTT TERM 421 424675 - 424687 + GT 79 -3.4 -5.38047 | opp_overlap 424684 GGATTGACCGTGTCG TCTC AAGCA GAGA TTTTTTCTCTAGGTA TERM 422 426027 - 426005 - gT 73 -9.2 -2.88999 | opp_overlap 426005 426019 CTTTGAGAGATCATA TGGGTTGTGT CTT ACAAAACCCA TTTTTGTTTTATGAC TERM 423 426005 - 426027 + GT 100 -9.2 -5.54907 | opp_overlap 426005, overlap 426019 CTTTGAGAGATCATA TGGGTTGTGT CTT ACAAAACCCA TTTTTGTTTTATGAC CAB368 424582 - 426549 + | ABC transporter, ATP-binding component CAB369 427213 - 426563 - | hypothetical protein CAB370 427967 - 427194 - | hypothetical protein dnaQ 428650 - 427964 - | DNA polymerase III subunit epsilon TERM 424 428340 - 428356 + g 74 -5.1 -4.67353 | opp_overlap 428343, overlap 428343 GATAAAGGTTCTAAG GCATGTC GGC GACATTC TTTTTCCATGAGTGG TERM 425 428343 - 428353 + g 70 -5.4 -4.44608 | opp_overlap 428343, overlap 428340 AAAGGTTCTAAGGCA TGTC GGC GACA TTCTTTTTCCATGAG CAB372 429139 - 428666 - | hypothetical protein CAB373 429677 - 429171 - | putative inner membrane protein TERM 426 430833 - 430882 + G 75 -10.1 -3.03124 | gap 1, overlap 430841 ATGATTGCAGATTTT CTTGCCTCCCCAGC-GAAAGAG CTAGGTA TTCTTTCGGCATGGGAGGCAGG TGTTGCACAATACCA CAB374 430029 - 430916 + | hypothetical protein CAB375 431802 - 430903 - | enoyl-(acyl carrier protein) reductase TERM 427 431173 - 431189 + g 79 -5.1 -5.01546 | GCCCCACTTTCTTCC TGCTTCC CAT GCAAGCA TTTTTGTATCACTTT TERM 428 432459 - 432478 + G 87 -5 -5.41143 | GAAGTGATGACGCGC TCTGTTTC ACTT GGAGCAGA TTTTTTTGCAAGATC TERM 429 433310 - 433296 - g 74 -4.2 -5.06089 | opp_overlap 433298, overlap 433298 AAACTAGAAACAAAA TACAGC TCG GCTGTT GTTTTAGTCGCTTTA TERM 430 433308 - 433298 - g 71 -6.8 -4.12652 | opp_overlap 433298, overlap 433296 ACTAGAAACAAAATA CAGC TCG GCTG TTGTTTTAGTCGCTT TERM 431 433298 - 433308 + G 73 -6.8 -4.2693 | opp_overlap 433298 433296 ACTAGAAACAAAATA CAGC TCG GCTG TTGTTTTAGTCGCTT TERM 432 434181 - 434163 - g 78 -3 -5.52384 | opp_overlap 434168, overlap 434139 434168 TTGGTATTAAAAAAA CCAGACCA GCA CGGCATGG ATGTTGTGGACCAAC CAB376 432069 - 434267 + | hypothetical protein TERM 433 434305 - 434287 - T 73 -2.4 -5.40474 | ATTTTTTGAAAAAAA TCACATCC CGA GCATGTAA TCATTCAGCTCAATC rluC 437530 - 436706 - | ribosomal large subunit pseudouridine synthase C mutY 437579 - 438688 + | putative A/G-specific adenine glycosylase CAB381 438685 - 439080 + | hypothetical protein CAB382 440040 - 439261 - | hypothetical protein CAB383 440736 - 440044 - | hypothetical protein TERM 434 441205 - 441160 - R 90 -12.5 -3.17941 | opp_overlap 441166 441168 441169, overlap 441162 AGGAGATTTGATGAA GAGATACTCCCCCTACCCGCA ATTT TGCGGACAGGGGATGTTTCGC AAACAACTCCACAGT TERM 435 441203 - 441162 - R 100 -13.7 -3.15078 | opp_overlap 441166 441168 441169, overlap 441160 GAGATTTGATGAAGA GATACTCCCCCTACCCGCA ATTT TGCGGACAGGGGATGTTTC GCAAACAACTCCACA TERM 436 441169 - 441196 + r 78 -11.2 -2.60496 | opp_overlap 441162 441160, overlap 441168 441166 GATGAAGAGATACTC CCCCTACCCGCA ATTT TGCGGACAGGGG ATGTTTCGCAAACAA TERM 437 441953 - 441978 + r 90 -11.9 -3.56892 | opp_overlap 441954, overlap 441949 441947 441954 CTTGATGACAAAAAA AGAACCCAGAC GCTT GTCTGGGTTCA TTCATCTTTCTTGTT TERM 438 441977 - 441954 - R 100 -15.4 -5.67063 | opp_overlap 441953 441949 441947 441954 TTGATGACAAAAAAA GAACCCAGAC GCTT GTCTGGGTTC ATTCATCTTTCTTGT TERM 439 441954 - 441977 + r 100 -15.4 -2.72508 | opp_overlap 441954, overlap 441953 441949 441947 TTGATGACAAAAAAA GAACCCAGAC GCTT GTCTGGGTTC ATTCATCTTTCTTGT CAB385 443528 - 442479 - | hypothetical protein TERM 440 442597 - 442610 + g 77 -8.1 -4.24204 | AGGGCGACTACGCGA GCAGC TTTT GCTGC TTTTAGATATGGATG CAB386 443928 - 444677 + | putative phosphatase TERM 441 444722 - 444746 + G 74 -6.3 -4.4595 | TATTTGGATAATAAC GCTATGGCTTC TTT GGAGCCGGGGC TTTTAGATTTTCTAC TERM 442 445398 - 445408 + G 70 -3.2 -4.89567 | AAAATCTCTGGGGTA TAGC TTC GCTG TTTTATATTTTCACC CAB387 444701 - 445816 + | putative cysteine desulfurase CAB388 447034 - 445820 - | putative membrane transport protein TERM 443 446665 - 446653 - G 72 -9.1 -3.43722 | overlap 446651 GGGAGTAATATAAGA TGGGG GCA CCCCA AAGCGCTAATCTCTC TERM 444 446985 - 446975 - G 75 -5.4 -4.69053 | CATCATGGAATAAAA TCCT TGA AGGA CAATGCATAGAAAAT CAB389 448262 - 447027 - | putative membrane transport protein TERM 445 447781 - 447793 + g 74 -6.3 -4.36914 | TTCAACTCTTGAGGC TGGAT AAT ATCCA TTTTCTGAGACGAAA CAB390 448601 - 448272 - | hypothetical protein TERM 446 448634 - 448621 - R 70 -3.1 -4.91429 | AAACTTTAAACAAAA GGAAC TGTA ATTCC CTGCTGTTTTTGATA dcd 449183 - 448611 - | deoxycytidine triphosphate deaminase TERM 447 449354 - 449331 - H 73 -3.2 -5.18561 | CAAATACCTAAAAAA TTCAAAGGTC TTTT AACTTTTGAA ACAACATATCTAGTC TERM 448 449440 - 449464 + H 78 -5.9 -4.74215 | opp_overlap 449439 449440 ACCATAGGAAAAAGG CAAATCTTA TTTTTCT TAAGATTTG TTTTATTGCTAATAT TERM 449 449679 - 449669 - H 90 -4 -5.82388 | AAATTCGAAAAAAAA CATA AGC TATG CTGTGCTTCGATCTG ruvB 449788 - 450801 + | Holliday junction DNA helicase B CAB393 450798 - 451613 + | hypothetical protein CAB394 453601 - 451610 - | putative glycosyl hydrolase CAB395 453733 - 454233 + | hypothetical protein TERM 450 454253 - 454263 + F 81 -4.6 -5.4251 | overlap 454250 454261 TAATTTCATCCAGGG TGCG TCA CGCG TTTTTTCTATATGGC CAB396 454886 - 455362 + | single-strand DNA-binding protein TERM 451 456010 - 455994 - g 82 -8.1 -4.58395 | overlap 456004 GTCACTCCCGAAAAA TTAGCAA ATA TTGCTAA AGGATTAGCTAAGCA CAB397 455400 - 456902 + | leucyl aminopeptidase CAB398 457044 - 457508 + | histone-like protein TERM 452 457536 - 457569 + F 93 -3.3 -6.13503 | gap 1 TTAGGCGATGGTGAA CGGTAAGAGGATAT AAAAAAA AGAT-CTCTTACCG TTTTTTTTGTTGATA TERM 453 458014 - 458042 + G 71 -7.4 -3.93867 | overlap 458016 458017 AGTCGTTTTTCCAGT CTTTGCGGAAGG AGCTC CCTTCTGCAGTG TTCTTATCGTTATTT TERM 454 458016 - 458040 + G 72 -8.6 -3.53597 | overlap 458014 458017 TCGTTTTTCCAGTCT TTGCGGAAGG AGCTC CCTTCTGCAG TGTTCTTATCGTTAT TERM 455 458017 - 458039 + G 70 -9.9 -2.71074 | overlap 458016 458014 CGTTTTTCCAGTCTT TGCGGAAGG AGCTC CCTTCTGCA GTGTTCTTATCGTTA CAB399 457674 - 458609 + | hypothetical protein CAB400 458606 - 459316 + | hypothetical protein TERM 456 459359 - 459335 - T 100 -11.6 -5.38958 | ATGGAGAAATAAAAA GAGGAATCTT TGTGC AAGATTCCTC AATACCTGTTTTCTA CAB401 459854 - 459372 - | membrane protein TERM 457 460684 - 460670 - g 83 -6.4 -5.0538 | TGGGATTTCAAAAAA GTGAAC AAA GCTCAC CAACGGCCCCAGAAC TERM 458 460758 - 460740 - g 73 -2.4 -5.20154 | AGACAATCCAAAAAA TAAAACAG CGG CTGCCCTA GGAGCGATTTCTACA TERM 459 461001 - 460989 - g 73 -7.7 -3.82208 | opp_overlap 460989 GACTAAAGATGGAAA TAGCG TGA CGCTA TTGCGTAGAGGCATC CAB402 459997 - 461358 + | hypothetical protein TERM 460 461393 - 461367 - T 80 -10.3 -3.34227 | opp_overlap 461370, overlap 461370 TTATTAAATTATGAA CAAGGCTAAGT CATGC ACTTAGCCTTA TTTTAGCCACAGAAA TERM 461 461390 - 461370 - T 84 -9.8 -3.79909 | opp_overlap 461370, overlap 461367 TTAAATTATGAACAA GGCTAAGT CATGC ACTTAGCC TTATTTTAGCCACAG TERM 462 461370 - 461390 + T 86 -9.8 -4.17048 | opp_overlap 461370 461367 TTAAATTATGAACAA GGCTAAGT CATGC ACTTAGCC TTATTTTAGCCACAG CAB403 462794 - 461409 - | hypothetical protein TERM 463 462558 - 462540 - G 72 -8.8 -3.48395 | opp_overlap 462556, overlap 462543 462553 ACCTTTTGTAGATAA GTACCCTG AAT CAGGGTCC GACTTGGACACATAG CAB404 463982 - 462861 - | coproporphyrinogen III oxidase CAB405 464418 - 463972 - | hypothetical protein TERM 464 464086 - 464108 + g 100 -13.6 -3.95219 | TGCAGCGCCTTCTTC TCGATCTTCA TCA TGAAGATCGA TTTCTACGGTTTCAC TERM 465 464463 - 464499 + H 81 -5.3 -5.09685 | opp_overlap 464462 464485, overlap 464464 GCAGATGTAATGTAT CCTTTGCTTTTTTTCAA CTA TAGAAAAAAAACAAAGA TTGTTTTTTTTTGAA TERM 466 464464 - 464498 + H 75 -8.8 -3.63371 | opp_overlap 464462 464485, overlap 464463 CAGATGTAATGTATC CTTTGCTTTTTTTCAA CTA TAGAAAAAAAACAAAG ATTGTTTTTTTTTGA TERM 467 465321 - 465337 + G 79 -9.5 -3.64236 | opp_overlap 465332, overlap 465332 AAGTTTTTATGGAGT TTGAGGA TAA TCCTCAA TTTCGAGGTTTAGAT TERM 468 466082 - 466070 - g 71 -6.3 -4.2649 | opp_overlap 466070 466069, overlap 466066 GAAGAAAATCATAAA CTCTT TAA AAGAG ATTGTCGTCATTGCG kgd 464573 - 467299 + | alpha-ketoglutarate decarboxylase sucB 467296 - 468393 + | dihydrolipoamide acetyltransferase TERM 469 468421 - 468440 + T 81 -4.3 -5.29782 | opp_overlap 468421 ATCTAGGAAGAAGCA GAACAGC AGTGAC GTTGTTC TTTTTTATAGGTGTA CAB408 469147 - 468404 - | hypothetical protein TERM 470 468854 - 468841 - G 79 -6.7 -4.57353 | CGGGATCATAGAAAA TTGCC GGTT GGCAA TCAGAATGTCGGATG CAB409 470981 - 469161 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 471 470007 - 470017 + g 76 -6.8 -4.43571 | overlap 470004 470005 ACCATAGACCGATCC CCAC GGG GTGG TTTTCGTGATTTTCT CAB410 472470 - 471289 - | putative inner membrane protein CAB411 473588 - 472566 - | putative inner membrane protein TERM 472 472879 - 472892 + g 70 -3.1 -5.00339 | opp_overlap 472868 472880, overlap 472880 ATGATGCCTAGGAAA TTAGG CAAC CCTAG TTTTTGCTTGTTGCT TERM 473 473903 - 473950 + r 75 -10 -2.85947 | opp_overlap 473903 473901 473906, overlap 473900 CTTGGTGTTATAAGA TGATGCCGTGGATCTATAACAC ATAC GTGTTGTAGATCCATGACAAGA TGATCTTATGTTAGC TERM 474 473947 - 473906 - R 100 -13.9 -2.80074 | opp_overlap 473903 473900, overlap 473903 473901 GGTGTTATAAGATGA TGCCGTGGATCTATAACAC ATAC GTGTTGTAGATCCATGACA AGATGATCTTATGTT CAB412 475139 - 473961 - | putative inner membrane protein CAB413 475604 - 475329 - | ferredoxin, root r-b2 TERM 475 475399 - 475415 + g 77 -5.1 -4.9181 | overlap 475409 TCATTAGAGTCTTCA GACTCTC CAA GAAAGTC TTTTTCCTCTTCTGT TERM 476 476164 - 476177 + G 90 -3.1 -5.95166 | overlap 476166 GCATCACCTATGATT TTCTC TTTG GGGAA TTTTTTTTCCTTAGG TERM 477 476936 - 476956 + G 76 -3.4 -5.31275 | gap 1 ATGAAACAGGCGTAT TCTTGCATC AAGA GATG-AAGA TTTTTTATCGTGACA flhA 475882 - 477639 + | type III secretion system protein TERM 478 477756 - 477741 - f 91 -6.2 -5.65927 | TACTGAAAGAAAAAA TTTGTG AAAA CACAAA ATACGCAAAACATTT CAB415 477744 - 478517 + | RNA polymerase sigma factor sigma-28 CAB416 478807 - 478514 - | hypothetical protein tyrS 478968 - 480206 + | tyrosyl-tRNA synthetase gnd 480220 - 481674 + | 6-phosphogluconate dehydrogenase lepA 483673 - 481865 - | GTP-binding protein LepA TERM 479 485109 - 485097 - g 76 -3.4 -5.30155 | TGATGAATCAAAAAA CAAG TCAAG CTTG GAAGACTATATGCTA CAB420 483905 - 485212 + | putative inner membrane protein TERM 480 485245 - 485268 + T 100 -11.8 -5.06816 | opp_overlap 485245 CAAGACAAAAAAAAA TCCTCACTTG GAAA CAGGTGAGGA TTTTTGTTAAGACCT TERM 481 485268 - 485245 - T 100 -9.6 -6.35605 | opp_overlap 485245 CAAGACAAAAAAAAA TCCTCACTTG GAAA CAGGTGAGGA TTTTTGTTAAGACCT CAB421 486893 - 485295 - | ADP/ATP carrier protein CAB422 487626 - 487114 - | hypothetical protein TERM 482 487364 - 487380 + g 71 -6.5 -4.30014 | CTGCGTTTTTTAGAG CCTCTAG GAG CTCGAGG TTTTGGGTTAATGGC CAB423 488113 - 489078 + | ABC transporter, substrate binding lipoprotein CAB424 489075 - 489854 + | ABC transporter, ATP-binding component TERM 483 490143 - 490162 + G 82 -8 -4.6265 | AAAACTCTGAGAGTC CATAAAGA TGCT TCTTTATG TTTTGTGCTTGTTGT TERM 484 490269 - 490306 + G 100 -10 -5.44638 | TATTTATATGGTCAG GCAGCGACTTTAGGTT ATGTAG AAGCTAAACTCGCTGC TTTTGTTTTTGTTCT CAB425 489855 - 491204 + | ABC transporter, membrane permease TERM 485 491215 - 491233 + G 71 -7.4 -3.82551 | overlap 491217 TATGATAGGCGCGTT TTCCCCAT ATC ATGGGGTA TCTTTTGTGCAATTT TERM 486 491217 - 491231 + G 79 -10 -3.48517 | overlap 491215 TGATAGGCGCGTTTT CCCCAT ATC ATGGGG TATCTTTTGTGCAAT TERM 487 491575 - 491587 + G 78 -4.1 -5.20331 | opp_overlap 491575 TTCAGAAGAAGCAAG TACCG CTT TGGTA TTTTCTTTGTTGTTT CAB426 491201 - 492184 + | ABC transporter, membrane permease TERM 488 492829 - 492811 - g 73 -10.4 -2.75712 | overlap 492808 GGATGTATTGAAGCA TCCCATAT GGA ATATGGGA GCTAAGATTACCGTA dxr 492224 - 493363 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase CAB428 493376 - 495244 + | putative metalloprotease CAB429 496181 - 495195 - | hypothetical protein TERM 489 496040 - 496029 - G 75 -5.8 -4.66953 | opp_overlap 496031 GTAAGATCTTAAAAA TGCG TGAA CGCA GATTACGGATTCTTT recF 497390 - 496287 - | recombination protein F TERM 490 497064 - 497083 + g 74 -5 -4.83169 | overlap 497054 497065 GACTATAGGGATCAT GCCTATCA ATTG TGATAGGG TTTTTATAGGAGACT TERM 491 497065 - 497082 + g 72 -8.5 -3.49419 | overlap 497054 497064 ACTATAGGGATCATG CCTATCA ATTG TGATAGG GTTTTTATAGGAGAC dnaN 498490 - 497390 - | DNA polymerase III subunit beta smpB 498730 - 499182 + | SsrA-binding protein apbE 500107 - 499163 - | thiamine biosynthesis lipoprotein CAB434 500940 - 500077 - | putative hydrolase TERM 492 500948 - 500974 + r 70 -8.1 -3.43049 | opp_overlap 500940 500938 500943, overlap 500967 AATAACATGAGCGAC TCCTTAAGAAG CCTCT CATCTTAAGGA TTCCTTGAGTTATTG CAB435 501446 - 500931 - | putative inner membrane protein TERM 493 500967 - 500983 + g 71 -7.3 -3.7941 | opp_overlap 500943, overlap 500948 TAAGAAGCCTCTCAT CTTAAGG ATT CCTTGAG TTATTGTACACGGTA TERM 494 501855 - 501870 + G 80 -6.2 -4.78661 | TTAGATAAGCAATTT CATGAT TCTA ATCATG TTTTAATTTTTAACT CAB436 501657 - 501947 + | late transcription unit B protein TERM 495 502083 - 502040 - f 70 -8.5 -3.29144 | gap 1, opp_overlap 502041, overlap 502041 TTATGCGCTCCAGAA GCTGTAGCAATATTCAGATC TCCAC AATCTGAATATTGCTAGA-C AGTTTGGTAGAATTA TERM 496 502041 - 502085 + F 72 -7.6 -3.76492 | gap 2, opp_overlap 502040 502041 TATGCGCTCCAGAAG CTGT--AGCAATATTCAGAT CTCCACA ATCTGAATATTGCTAGACAG TTTGGTAGAATTACC TERM 497 502175 - 502197 + F 100 -13.5 -6.34616 | TTCTTTAGGTTTTTT CGCAAGGTG TTACC CACCTTGCG TTTTTTTTCTTTTAA TERM 498 503708 - 503730 + G 83 -10.7 -3.67877 | overlap 503706 TAAGTTCTGCGTATT TATTCCCTG CGCAT CAGGGAATA TCTTTGTTAGCACCT TERM 499 503793 - 503816 + G 77 -8.2 -4.15066 | gap 1, opp_overlap 503789 AGTAGAAAAGCGCAA GGGTCCTGGAG CAC CTCCA-GATCC TTTAATTTATCAATA CAB437 502309 - 504048 + | hypothetical protein CAB438 504050 - 504511 + | hypothetical protein CAB439 505566 - 504508 - | hypothetical protein CAB440 507417 - 505672 - | hypothetical protein rpmB 507712 - 507443 - | 50S ribosomal protein L28 TERM 500 507783 - 507773 - R 81 -4 -5.55698 | opp_overlap 507773 TATAATTGAAAAAAA TCTA TGT TAGA CATTTTCTGATATAT malQ 509477 - 507885 - | 4-alpha-glucanotransferase scc 509955 - 509515 - | putative Type III secretion chaperone CAB444 511167 - 509971 - | hypothetical protein TERM 501 510480 - 510458 - G 70 -3.4 -4.89477 | opp_overlap 510474 510477, overlap 510441 CCTTTAAGAATAAAA GAAGATACAG TTC CCATTTCTTC ATAGTTGTAGCGTGT CAB445 513321 - 511192 - | putative membrane transport protein CAB446 514403 - 513321 - | type III secretion system protein TERM 502 514675 - 514716 + H 78 -8.9 -3.69395 | gap 1, opp_overlap 514674, overlap 514676 514679 514689 CGAACCGAATGCAAG CTCCCACAAGCAT-CGAATC AAC GATTCTTATGTTTGTGGGAA TTCTTCCCTAGTAAA TERM 503 514676 - 514715 + H 84 -12.4 -2.81316 | gap 1, opp_overlap 514674, overlap 514675 514679 514689 GAACCGAATGCAAGC TCCCACAAGCAT-CGAATC AAC GATTCTTATGTTTGTGGGA ATTCTTCCCTAGTAA CAB447 514765 - 515859 + | translation-associated GTPase ribF 516751 - 515837 - | bifunctional riboflavin kinase/FMN adenylyltransferase truB 517442 - 516735 - | tRNA pseudouridine synthase B TERM 504 517007 - 517044 + g 70 -2.7 -5.16572 | CCGTAGATTGGCGAC GTTCTATGGATAACCCC TTTC GGGCATATTCATAAAGC TTTTTTCCGTTAACT rbfA 517845 - 517483 - | ribosome-binding factor A TERM 505 517578 - 517548 - G 87 -6.3 -5.24129 | gap 1, opp_overlap 517548, overlap 517550 CCTGCGGAGAAAAAA TATCCTCGAGATAA AAAT TTATCTCG-GGAAA ATACTTAAGTACGAC TERM 506 517576 - 517550 - G 85 -8.9 -4.25873 | gap 1, opp_overlap 517548, overlap 517548 TGCGGAGAAAAAATA TCCTCGAGATAA AAAT TTATCTCG-GGA AAATACTTAAGTACG infB 520476 - 517852 - | translation initiation factor IF-2 TERM 507 518028 - 518040 + g 72 -3.4 -5.05505 | overlap 518025 GAACTTCATTATTGC GTAC AACAC GTAC TTTTTGATTTCTAGT TERM 508 518502 - 518514 + g 71 -6.3 -4.1891 | AATTAGGACGTTTCT TTTGC AAA GCAAA TTTCTGTTGGCCAGC TERM 509 518848 - 518864 + g 71 -7.3 -3.86897 | TAACTCTAAAACTTC TGCTTGT AGA GCAAGCA TTTCTAAAAGCTCAG TERM 510 520371 - 520385 + g 79 -5 -5.03994 | GAACCTTAGTCGTAG GCTTTT CTG AAGAGC TTTTTGTGTCTGAAG nusA 521770 - 520466 - | transcription elongation factor NusA TERM 511 521842 - 521821 - R 79 -10.3 -3.26596 | opp_overlap 521816 521816, overlap 521816 GCTAAACCAAGGCAA GCTTATGTT ATAC AACATAAGC TCAACCTTTTAAGTA rpsA 523606 - 521861 - | 30S ribosomal protein S1 TERM 512 522223 - 522237 + g 85 -2.8 -5.77856 | TTGAACTTAGCTGTT TGACTC CTA GAGTGA TTTTTTTACTTTCTT trxB 523775 - 524710 + | thioredoxin reductase acpS 525070 - 524702 - | 4'-phosphopantetheinyl transferase CAB456 525532 - 525086 - | putative inner membrane protein TERM 513 525857 - 525867 + G 75 -2.6 -5.18371 | CATTCCTGGATCACG TATA GCT TATA TTTTATTTTATGGAG lgt 525603 - 526493 + | prolipoprotein diacylglyceryl transferase TERM 514 527777 - 527760 - g 75 -9.9 -3.32521 | opp_overlap 527755 ACGATATGTGGATAA CTTCAGG TGTC CCTGAAG TTGAAATTATGTCCA TERM 515 528108 - 528081 - g 73 -7.9 -3.83205 | gap 1 ATCCGGGATATGAAA CCTTACTTCCTT TACCC AAGGAAG-AAGG CACGTATCGTTTTCT TERM 516 528774 - 528758 - g 75 -2.9 -5.24129 | overlap 528759 GCTTTGCAGAAAAAA GGACCTG TTA CAGATCA ACAAAGACAACAGGA CAB458 526589 - 528973 + | putative inner membrane protein translocase component YidC TERM 517 529008 - 528988 - f 90 -4.1 -5.87688 | overlap 528989 ACAACTGAAAAAAAA GCTTTTTTA TAC TAAAAAAGA TATAAGAAAACTATT TERM 518 529007 - 528989 - f 76 -7.6 -4.10173 | overlap 528988 CAACTGAAAAAAAAG CTTTTTTA TAC TAAAAAAG ATATAAGAAAACTAT TERM 519 529339 - 529320 - g 73 -2.1 -5.1861 | opp_overlap 529309 TGCAGCAGGAAAAAA CTGCCTA TTTTAC TATGCAG TATGGCAATGTCAAT dnaA 529040 - 530422 + | chromosomal replication initiation protein CAB460 530780 - 530424 - | putative lipoprotein glgP 530995 - 533493 + | glycogen phosphorylase TERM 520 533543 - 533562 + T 73 -5.7 -4.58773 | GTACTAGCAACGCTT GTTGTGG AAAAAC CCGCAAC TTTTAATTTAATAAA pdhC 534854 - 533565 - | branched-chain alpha-keto acid dehydrogenase subunit E2 pdhB 535845 - 534859 - | pyruvate dehydrogenase E1 component, beta subunit pdhA 536863 - 535838 - | pyruvate dehydrogenase e1 component, alpha subunit TERM 521 536646 - 536659 + g 70 -8.1 -3.63073 | opp_overlap 536642 GTATTAGCCAATGCT GCGGT AGCA ACCGC TTCTTGACCACTATA CAB465 537028 - 538059 + | hypothetical protein lpxD 539144 - 538065 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CAB467 539711 - 539172 - | hypothetical protein TERM 522 539405 - 539415 + g 93 -5.4 -5.57396 | opp_overlap 539405 TGTATTCTGCGGAAA GTTC CTC GAAC TTTTTTCTTAATTCT CAB468 542190 - 539818 - | hypothetical protein recR 542964 - 542362 - | recombination protein RecR TERM 523 543342 - 543352 + G 71 -6.8 -3.99228 | ATTATTTTTTCTACA TCGG CCC CCGA TTATATTTTCCCTTC fabH 543078 - 544091 + | 3-oxoacyl-(acyl carrier protein) synthase III fabD 544092 - 545018 + | acyl-carrier-protein S-malonyltransferase TERM 524 545685 - 545697 + G 74 -6.3 -4.3255 | TCCTGAAGAAATTGC TAACG CAG CGTTA TTTCTTGCTTCACCC fabG 545023 - 545769 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 545881 - 546117 + | acyl carrier protein CAB474 546675 - 546253 - | Crp/Fnr family transcriptional regulator CAB475 549464 - 546687 - | putative lipoprotein TERM 525 546864 - 546841 - G 70 -8.2 -3.66874 | opp_overlap 546841 GTAAGTTTACTTAAA TATGAAGGAG AATT CTCCATCATA TTCAATAACTCTTTT TERM 526 547960 - 547944 - G 73 -6.6 -4.29106 | opp_overlap 547944 547942 547940, overlap 547929 CTCTAGAGTAAGAAA GTCTCT TGCCC AGAGAC TATTCTTTAGCATTT incC 550122 - 549568 - | inclusion membrane protein C incB 550767 - 550159 - | inclusion membrane protein B CAB478 552334 - 550853 - | sodium symporter family membrane transport protein TERM 527 551678 - 551701 + g 73 -7.6 -3.98826 | gap 1, overlap 551662 TGTATCCCAGGCATT TTG-GGTTAGA GCT TCTAACCACAA TTTGTAGCTTGATAA CAB479 553560 - 552340 - | sodium symporter family membrane transport protein TERM 528 552984 - 552974 - G 89 -6.8 -5.18995 | AAGAGAATAGAAAAA GCCA TGG TGGC TGGGATCAGTAATTT TERM 529 553655 - 553643 - H 76 -3.5 -5.34857 | overlap 553648 TGAAATAAAATAAAA TAAAA CTT TTTTA AAGTGCAGCATGTCG TERM 530 553658 - 553648 - H 78 -4 -5.40279 | overlap 553643 TAAAATAAAATAAAA CTTT TTT AAAG TGCAGCATGTCGTGT CAB481 553665 - 554843 + | putative inner membrane protein CAB482 555105 - 557237 + | hypothetical protein TERM 531 557699 - 557713 + G 89 -4.3 -5.59502 | AATACAGCAGGGCGG CTCAT GACGA ATGAG TTTTTTGCTTTTTTG TERM 532 558432 - 558449 + G 90 -7.1 -5.24129 | TTGTGTATCTTATGG GATTCAT AGGG ATGAATC TTTTTTCTGGAGGGG CAB483 557264 - 558676 + | putative magnesium transporter TERM 533 558979 - 559002 + G 70 -9 -3.21747 | opp_overlap 558985, overlap 558982 558985 TTTTAAACGCAGAGC GGAGAATCTT TCCC AAGATTCTTC TTCCTAATGAAATAG TERM 534 560170 - 560185 + G 70 -2.6 -5.08011 | overlap 560171 GAGATTTGATCTCGG TGATTT CTTC AAATCG TTTTTTAGAAGTTTT CAB484 558816 - 560231 + | hypothetical protein TERM 535 560273 - 560331 + T 73 -8.7 -3.338 | gap 3, opp_overlap 560255 560279 560287, overlap 560275 560279 560287 GGATTTTCTGTGATT GAGAA-ACACAAAAAGCAGT-CCTTAAA AGAGTA TTTAAGGTACTGCT-TTTGTGTATCCTC TTAGATTTACTTAAT TERM 536 560275 - 560328 + T 80 -11.5 -2.53004 | opp_overlap 560255 560279 560287, overlap 560273 560279 560287 ATTTTCTGTGATTGA GAAACACAAAAAGCAGT-CCTTAAA AGAGTA TTTAAGGTACTGCT-TTTGTGTATC CTCTTAGATTTACTT TERM 537 560324 - 560279 - T 89 -10.9 -3.91897 | opp_overlap 560279 560275 560273 560287, overlap 560255 560287 TCTGTGATTGAGAAA CACAAAAAGCAGT-CCTTAAA AGAGTA TTTAAGGTACTGCT-TTTGTG TATCCTCTTAGATTT TERM 538 560279 - 560324 + T 79 -10.9 -2.93637 | opp_overlap 560255 560279 560287, overlap 560275 560273 560287 TCTGTGATTGAGAAA CACAAAAAGCAGT-CCTTAAA AGAGTA TTTAAGGTACTGCT-TTTGTG TATCCTCTTAGATTT TERM 539 560317 - 560287 - T 93 -7.8 -5.24799 | gap 1, opp_overlap 560287 560279 560275 560273, overlap 560255 560279 TGAGAAACACAAAAA GCAGT-CCTTAAA AGAGTA TTTAAGGTACTGC TTTTGTGTATCCTCT TERM 540 560287 - 560317 + T 84 -7.8 -4.63586 | gap 1, opp_overlap 560255 560279 560287, overlap 560279 560275 560273 TGAGAAACACAAAAA GCAGT-CCTTAAA AGAGTA TTTAAGGTACTGC TTTTGTGTATCCTCT CAB485 561738 - 560338 - | putative amino acid permease fbaB 562804 - 561755 - | fructose-bisphosphate aldolase TERM 541 564897 - 564886 - g 74 -4.4 -4.91712 | opp_overlap 564886, overlap 564880 TGGAATCTAGAAAAA TAGC GGGG GCTA TTCTTCCTCAGCTTT CAB487 562974 - 564920 + | putative inner membrane protein TERM 542 565551 - 565525 - g 86 -4.5 -5.42975 | gap 1, opp_overlap 565532, overlap 565528 565529 GGACAGAAACAAAAA GTAG-CAATTGC TATA GCAATTGTCTCC GATCCTAGGGTTTTG TERM 543 565585 - 565613 + G 70 -8.9 -3.25668 | opp_overlap 565583, overlap 565583 565603 TGTGACGAAATCACT TCTGCTTTGGATC CGA GATCCACAGAAGA TGTTGTGGATAAATT CAB488 565063 - 566088 + | ABC transporter, ATP-binding component CAB489 566102 - 566767 + | putative ABC transport integral membrane subunit TERM 544 567161 - 567138 - g 75 -9.6 -3.28765 | opp_overlap 567142, overlap 567142 AGAGCTTAAAGTCAA GGAACAGCTA CGTA TAGCGGTTCC TATAGATAGAACAAA CAB490 566764 - 567567 + | putative lipoprotein CAB491 567663 - 568217 + | hypothetical protein CAB492 568471 - 568821 + | hypothetical protein TERM 545 570065 - 570050 - g 74 -6.1 -4.42238 | TGACGTTAAGGAAAA GCGCT TTAGAC AGCGC ACGACTTCCTGGAAA gyrB 568825 - 571245 + | DNA gyrase subunit B TERM 546 571611 - 571653 + G 70 -9.9 -2.50016 | gap 1, overlap 571610 571609 TGACGGGGATCCTGC CGCTGCTATGCGTTATACGG AAGC CCGCTTAACCCATAGC-GCG ATCTTCCTCATGGAA TERM 547 571910 - 571923 + G 70 -8.1 -3.6363 | opp_overlap 571908 TGCCAGGACCAGATT TCCCC ACAG GGGGA TTGATTTGTGGTAGT gyrA 571261 - 573753 + | DNA gyrase subunit A tdk 573766 - 574401 + | thymidylate kinase TERM 548 575161 - 575151 - g 72 -3.2 -5.00895 | GTGATTATAGAAAAA GCCT ATC AAGC TTTGGATAATTCTTC CAB496 574467 - 575267 + | DNA polymerase III subunit delta' CAB497 575966 - 575244 - | putative hydrolase TERM 549 576589 - 576562 - g 71 -4.2 -4.91109 | gap 1, opp_overlap 576563, overlap 576563 CGTTGACCATAAAAA CCCTAGATTTCAC CAA GAGAAA-CTAGGA TTTAGGATTCTTTCT CAB498 576242 - 577129 + | hypothetical protein CAB499 577126 - 578109 + | hypothetical protein TERM 550 578136 - 578116 - T 100 -14.7 -6.06529 | opp_overlap 578116 GATATATAAAAAAAA CCCGAGGCA TTG TGCCCCGGG TTTGTGACGAGAGAG TERM 551 578116 - 578136 + T 95 -12.5 -3.85698 | opp_overlap 578116 GATATATAAAAAAAA CCCGAGGCA TTG TGCCCCGGG TTTGTGACGAGAGAG CAB500 579273 - 578173 - | putative inner membrane protein CAB501 580553 - 579453 - | putative inner membrane protein CAB502 581432 - 580752 - | hypothetical protein ubiA 581625 - 582524 + | prenyltransferase TERM 552 582789 - 582807 + G 71 -9.6 -2.8655 | overlap 582773 GTCCTGTCGTGTTGA TGGGACGA TTA TCGTTCCA TGTAGTATGGCTACA CAB504 582538 - 583116 + | aromatic acid decarboxylase CAB505 584006 - 583113 - | putative lipoprotein TERM 553 584059 - 584075 + r 74 -10.1 -2.62933 | TTGAACCCGCAACTT CCGCCTT GAC AGGGCGG TGCTCTAACCAATTG TERM 554 584502 - 584525 + r 72 -7.5 -3.73042 | opp_overlap 584502 584500, overlap 584500 AATCTATAGAATAGA TCGGTAGAG ATCGTG TTCTACCGA TATTTTCATAGGGAA surE 585399 - 584563 - | stationary phase survival protein SurE TERM 555 585445 - 585421 - R 78 -5.9 -4.7923 | opp_overlap 585421, overlap 585413 ACCGAAATAAATAAA TCTTACTAT AATTAAA ATAGTAAGA TTAATCTATAAAAAT CAB507 586210 - 585446 - | hypothetical protein TERM 556 586080 - 586060 - G 76 -6.9 -4.3534 | overlap 586044 586069 CTTTAAGCATTAAAA GCAAAGAAA GGC TATCTTTGC CTCCACTAAGAGCTA CAB508 586338 - 586811 + | hypothetical protein CAB509 587186 - 588019 + | hypothetical protein CAB510 588022 - 588867 + | hypothetical protein CAB511 588871 - 589692 + | hypothetical protein CAB512 591099 - 589717 - | hypothetical protein TERM 557 590234 - 590251 + g 79 -4.9 -5.14563 | AAAATTTGTTCTCGA GATGTTG TTCT TAACATC TTTTTTAATACCCGA TERM 558 591039 - 591052 + g 70 -2.5 -5.09426 | opp_overlap 591039, overlap 591050 AGCAGCCTAAACTAA TAAAA TGAA TTTTA TTTTTTGAAGTTGCC rpmG 591198 - 591356 + | 50S ribosomal protein L33 TERM 559 592614 - 592627 + G 77 -5.3 -4.96106 | GGGGACTTCTTCTCG TAGCT TAAA AGCTA TTTTTGGTCTTTGTG lolC 591406 - 592917 + | lipoprotein releasing system transmembrane protein lolD 592920 - 593591 + | lipoprotein releasing system ATP-binding protein TERM 560 594951 - 594940 - f 76 -2.2 -5.50499 | overlap 594928 594926 TTAGAGTTAAAAAAA CCCT ATAA AGAG ACATCTGTAAGCACA rplM 595365 - 595817 + | 50S ribosomal protein L13 TERM 561 596120 - 596109 - g 70 -3 -5.14965 | AGCTTTATTAAAAAA GAAT GTTG ATTC TAAACAAGAATTAAA rpsI 595831 - 596232 + | 30S ribosomal protein S9 TERM 562 596270 - 596303 + T 70 -2.6 -5.1166 | gap 2 AAGATTTTATCAAAA GCAAGCG--AGAGTCT TATC AGATTTTGTCGCTTGC TTTTTCATTTTCGTC CAB520 597209 - 596358 - | hypothetical protein adk 597905 - 597264 - | adenylate kinase CAB522 598187 - 599320 + | putative inner membrane protein TERM 563 599589 - 599575 - g 90 -7.2 -5.27335 | opp_overlap 599581, overlap 599581 TTGGGGAAATAAAAA CAGAAA TGC TTTCTG AGCACTTGGTTCTTA CAB523 599337 - 599750 + | putative inner membrane protein CAB524 599869 - 601005 + | putative inner membrane protein pgl 601817 - 601041 - | 6-phosphogluconolactonase TERM 564 601610 - 601622 + g 77 -6.3 -4.55697 | opp_overlap 601609 AGATCTTTGAAGGAT GAGAA ATT TTCTC TTTATTTATCACGAT zwf 603406 - 601841 - | glucose-6-phosphate 1-dehydrogenase CAB527 605173 - 603587 - | membrane transport protein, solute-binding component TERM 565 603901 - 603876 - GR 70 -3.3 -4.93898 | gap 1, overlap 603878 ATAGGATCAGAAAAA TCGGCAAACCAG CCT CCAGT-TGCCAA AGAGAAATGCCCCGA CAB528 606153 - 605119 - | O-sialoglycoprotein endopeptidase CAB530 606725 - 607372 + | ABC transporter, membrane permease CAB531 607369 - 608049 + | ABC transporter, ATP-binding component TERM 566 608080 - 608062 - T 90 -13.2 -2.87344 | opp_overlap 608062 608069, overlap 608064 TAGTCGCGGGATATA CAGCTGCT CAT AGCAGCTG TTGCATGATTTAATA TERM 567 608062 - 608080 + T 95 -13.2 -3.17054 | opp_overlap 608062 608064, overlap 608069 TAGTCGCGGGATATA CAGCTGCT CAT AGCAGCTG TTGCATGATTTAATA TERM 568 608078 - 608064 - T 76 -10 -2.98823 | opp_overlap 608062 608069, overlap 608062 GTCGCGGGATATACA GCTGCT CAT AGCAGC TGTTGCATGATTTAA CAB532 609452 - 608106 - | hypothetical protein TERM 569 608894 - 608912 + g 73 -6.8 -4.31164 | overlap 608895 CATGATTTTTGACCT TTTCATGA GTT TCATGAAG TTTATCTTCTATAGG CAB533 612990 - 609571 - | hypothetical protein TERM 570 612947 - 612929 - G 85 -3.8 -5.5762 | overlap 612930 AGGAAATAGAAAAAA GTTAGGAA AAT TCCCAAAC TGATGCTTATCCCTA CAB534 614279 - 612987 - | putative inner membrane protein CAB535 615237 - 614359 - | hypothetical protein TERM 571 615226 - 615206 - G 90 -3.9 -5.90231 | overlap 615207 AGAAAGACAAAAAAA GGCAAGAAG AAG CTCTCTGCC TTTTTTTGCATCATG incA 616396 - 615254 - | inclusion membrane protein TERM 572 616220 - 616204 - G 71 -6.5 -4.26019 | TAATGAGATGGAAAA TGCGCTG AAG CAGCGAA ACCCTAACCTCAGGA CAB537 616790 - 617485 + | ribulose-phosphate 3-epimerase CAB538 617472 - 618029 + | elongation factor P CAB539 618061 - 618561 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit accC 618561 - 619916 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 573 622340 - 622326 - T 74 -4.2 -5.04385 | opp_overlap 622326 TACATTTGTAAAAAA CGTTCT AGA AGCACG CTATTTAGAAAAAAG TERM 574 622366 - 622355 - T 73 -2.2 -5.28176 | opp_overlap 622364 GCTATTTAGAAAAAA GAGA TAGC TCCC ATATATCTTGGCCTA TERM 575 623226 - 623200 - T 100 -8.1 -5.78622 | opp_overlap 623200, overlap 623202 GTATTCTAAAAAAAA TAGGTATCCTG GTTAA CAGAATACCCA TGCTTCGCTATAGAG TERM 576 623224 - 623202 - T 88 -8.5 -4.53853 | opp_overlap 623200, overlap 623200 ATTCTAAAAAAAATA GGTATCCTG GTTAA CAGAATACC CATGCTTCGCTATAG CAB545 624252 - 623263 - | hypothetical protein CAB546 625427 - 624804 - | hypothetical protein CAB547 625704 - 625420 - | hypothetical protein CAB548 626617 - 625937 - | hypothetical protein TERM 577 626762 - 626778 + r 78 -6.7 -4.63486 | opp_overlap 626753 626761 AAAGATCAAAAGATT TTTTGTT GAG AACAAAA TTTTATTCGAAAAAT CAB549 628488 - 626920 - | hypothetical protein TERM 578 627699 - 627674 - G 73 -9.7 -3.16475 | gap 1 TATGCAGACAGGGAA CCCCGAGATTGC CAA GCT-TCTCGGGG AAGAGGACATAGTAA CAB550 628794 - 628495 - | hypothetical protein TERM 579 629773 - 629763 - R 70 -5.4 -4.50257 | ACAGAAGAGAACAAA CAAG TTT CTTG TGGAAGTACTTCAGA TERM 580 630020 - 630006 - R 83 -7.2 -4.79667 | opp_overlap 629996 AAAATGGAGTAAAAA TTCCTT AAT AAGGAA GTCCGGTAGATGTCT TERM 581 630155 - 630131 - R 95 -13 -3.98114 | opp_overlap 630129 AATTCAACAGAATAA CTGAGAGCTT ATAAA AAGCTCTCAG AATACATTGAGATGA CAB553 631030 - 630197 - | putative lipoprotein CAB554 631498 - 631965 + | hypothetical protein TERM 582 632101 - 632091 - f 80 -6.8 -4.77036 | TCTCATGATTAAAAA TCCC TAT GGGA TCACTATCTGAACAG TERM 583 633038 - 633054 + F 72 -3.6 -4.91285 | overlap 633033 CTAGTTGTTGAAAAA CCTTGC TACCC GCGGGG TTTTGTTGTATTGAT CAB557 633304 - 633768 + | hypothetical protein CAB558 634193 - 634864 + | hypothetical protein CAB559 635042 - 636160 + | queuine tRNA-ribosyltransferase TERM 584 636263 - 636209 - f 100 -19.2 -3.13343 | opp_overlap 636209 ACTCGAAGTATTTAA GATGAGTTTACATAAAAAACAAAT AAGAGAA ATTTGATTTTTATGTAAACTCATC TTAAATTGCTTCTCT TERM 585 636209 - 636263 + F 100 -19.2 -3.25758 | opp_overlap 636209 ACTCGAAGTATTTAA GATGAGTTTACATAAAAAACAAAT AAGAGAA ATTTGATTTTTATGTAAACTCATC TTAAATTGCTTCTCT CAB560 636396 - 636842 + | hypothetical protein CAB560A 637249 - 637713 + | hypothetical protein CAB562 639195 - 638785 - | putative disulfide oxidoreductase CAB563 639886 - 639188 - | hypothetical protein CAB564 640014 - 641312 + | hypothetical protein CAB565 642030 - 641326 - | hypothetical protein CAB566 642722 - 642015 - | ABC transporter, ATP-binding component TERM 586 642957 - 642944 - R 85 -3.9 -5.77571 | ATCAAAAAAGAAAAA GTTAT CTTA ATAAC TAAGGGATTTAACCT TERM 587 643847 - 643825 - R 72 -7.8 -3.69216 | overlap 643823 TTCTCACTGAAAATA TCTATAGAAG ATG CTTCTAAAGA GATAAGGGAACAACA TERM 588 644022 - 643974 - R 79 -10.6 -3.21465 | opp_overlap 643972 643976, overlap 643955 643972 AAGCTAAAGTGAAGA TAGCTCTTTCGAACCTAG AGGTAGCGAAAAA CTAGACTCGAAAGAGCTA ATCTTCGATGCATTT CAB568 644761 - 644069 - | hypothetical protein TERM 589 644262 - 644248 - G 70 -5.8 -4.41348 | TTCCCCTGAAATAAA TATCTT CAC AAGATA TCCAAAATTCTAAAG TERM 590 644912 - 644898 - H 70 -2.8 -5.09426 | overlap 644899 CCCAACTGTAAAAAA TCTTAG ACA CTAAGG AGTTTCTGCGGCTTA CAB569 644927 - 645691 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 591 646164 - 646183 + G 80 -10.8 -3.27022 | ATTCCGTTATGAGCA TGCTGAAG ACTG CTTCAGCA TTCATATGACCTACG ctrA 645667 - 647280 + | CTP synthetase ruvX 647273 - 647725 + | Holliday junction resolvase-like protein CAB572 647973 - 649313 + | putative ABC transporter peptide periplasmic binding lipoprotein TERM 592 650371 - 650350 - g 76 -6.7 -4.46212 | overlap 650354 GCCTGTACTACAAAA TAAAGCTCT AAGG AAAGCTTTA GCCTATGCTATTGAC TERM 593 650421 - 650433 + G 72 -3.4 -5.08824 | TACTCAATGCAGCCA GAGT TGCCC ACTC TTTTTTACCTCCGGA CAB573 649430 - 651037 + | putative ABC transporter peptide periplasmic-binding lipoprotein CAB574 651242 - 652834 + | putative peptide ABC transporter substrate-binding component TERM 594 654012 - 654000 - g 76 -3.3 -5.27923 | overlap 654001 GAAGCTGATAAAAAA GTGAG TTT CTCTC AAGAAAGTGAACATC CAB575 653061 - 654032 + | putative peptide ABC transport system permease protein CAB576 654092 - 654958 + | putative peptide ABC transport system permease protein TERM 595 655689 - 655657 - g 70 -9.9 -2.7169 | opp_overlap 655668, overlap 655656 655668 AACTTGTAGAAACAG GCAGTGTAAAAGAGA TCT TCTCTTCTCCACAGC ACCCTTATACAAAAC CAB577 654951 - 655817 + | putative peptide ABC transporter CAB578 655810 - 656595 + | putative peptide ATP-binding component of ABC transporter TERM 596 656767 - 656799 + F 78 -10.8 -2.74263 | opp_overlap 656762, overlap 656766 656769 CACCTAAAGATCTAC GACTCAATAACG TAGGAAAAC CGTTATTGAGTC CTTTAGGCATGACGT CAB579 656884 - 657639 + | hypothetical protein TERM 597 657840 - 657860 + G 70 -8.3 -3.35774 | overlap 657843 TTATCCTGCAGCCCG TGCCTATGG GAG CCATAGTCA TTATCGGGATTTCTA TERM 598 658491 - 658502 + G 70 -3 -5.04222 | opp_overlap 658491, overlap 658484 AAAAAGGAGAAAAGA TCAT CTTG ATGA TTTTTACTTTGCTTG CAB580 657686 - 659098 + | putative sodium:sulfate symporter TERM 599 659149 - 659124 - f 100 -13.5 -3.99957 | opp_overlap 659124 659129, overlap 659129 659143 659144 TCAAACAGCGAGAAA GAAAACCTTCT AACC AGAAGGTTTTC TTTTATTCGATAAAG TERM 600 659124 - 659149 + F 100 -13.5 -4.67982 | opp_overlap 659124 659129 659143 659144, overlap 659129 TCAAACAGCGAGAAA GAAAACCTTCT AACC AGAAGGTTTTC TTTTATTCGATAAAG TERM 601 659129 - 659144 + F 95 -7.6 -5.27476 | opp_overlap 659124 659129 659143, overlap 659124 CAGCGAGAAAGAAAA CCTTCT AACC AGAAGG TTTTCTTTTATTCGA TERM 602 659144 - 659129 - f 89 -7.6 -5.0065 | opp_overlap 659129 659124, overlap 659124 659143 CAGCGAGAAAGAAAA CCTTCT AACC AGAAGG TTTTCTTTTATTCGA TERM 603 659764 - 659750 - g 70 -8.6 -3.37493 | opp_overlap 659749, overlap 659744 GTTCGAATACAGCAA CTGCTA TCC TAGCAG AATACTTTTCTCAGC TERM 604 660269 - 660257 - g 71 -4.1 -4.88129 | AAAAATTACTAAAAA GCTTC CCG GAAAC TATCGCTAAACAACT CAB581 659209 - 660867 + | diphosphate--fructose-6-phosphate 1-phosphotransferase CAB582 661026 - 661802 + | putative ester hydrolase CAB583 661812 - 663437 + | diphosphate--fructose-6-phosphate 1-phosphotransferase gseA 664946 - 663711 - | 3-deoxy-D-manno-octulosonic-acid transferase leuS 667471 - 665009 - | leucyl-tRNA synthetase TERM 605 665904 - 665882 - G 70 -8.5 -3.40191 | overlap 665874 GCGAGAATATAGTAA GTGCAAAAC CGCGT GTTCTGCAC CTCCAATATACAGAT TERM 606 667920 - 667942 + G 71 -4.1 -4.9448 | CGTGACTCCTATGCC TGAAGGTGG TTATC CTACCATCA TTTTATTTCATGGCT TERM 607 668276 - 668290 + G 74 -4.3 -4.86731 | overlap 668269 GCCTTTGGGCTCCAG TTGCT GATGG AGCAA TTTTATTTAAAGAAA CAB586 667702 - 668649 + | hypothetical protein CAB587 668791 - 670311 + | putative monooxygenase CAB588 674828 - 670416 - | putative transmembrane protein ligA 676959 - 674977 - | NAD-dependent DNA ligase LigA CAB590 678823 - 676967 - | putative serine/threonine protein kinase TERM 608 677692 - 677704 + g 75 -5.5 -4.72127 | CTGTGAATAAGGGTT GGGGT TTC ACCTC TTCTTTTTCTTCTTC TERM 609 678961 - 678920 - R 100 -13.3 -4.09374 | gap 1, opp_overlap 678920 678924 AATATACAAGAATAA CACAGAAGGACTTT-GGAAA GAT TCTCCTAAAGTCCTTCTTTG TTCTTAAGAATAAAC TERM 610 678920 - 678961 + r 84 -11.1 -3.63515 | gap 1, opp_overlap 678920, overlap 678924 AATATACAAGAATAA CACAGAAGGACTTT-GGAAA GAT TCTCCTAAAGTCCTTCTTTG TTCTTAAGAATAAAC TERM 611 678924 - 678957 + r 95 -10.5 -4.45068 | gap 1, opp_overlap 678920, overlap 678920 TACAAGAATAACACA GAAGGACTTT-GGAAA GAT TCTCCTAAAGTCCTTC TTTGTTCTTAAGAAT CAB591 679447 - 679055 - | putative transmembrane protein TERM 612 679529 - 679515 - H 71 -8.6 -3.24735 | overlap 679510 GATGCAAACATTCAA TCAGAG ATT CTCTGA TCATAAAAATAATGA TERM 613 679674 - 679662 - H 70 -2.7 -5.20216 | TACATTATGAAAAAA GAAAA AAC CTTTC CTATACATCGAGAAA CAB592 679860 - 680231 + | hypothetical protein TERM 614 680580 - 680551 - T 100 -8.7 -5.626 | opp_overlap 680551 TATCGCATAAAAAAA CCGTTCTATCATC TTTG AATTATAGAACGG TTTTCAACAAACTTG TERM 615 680551 - 680580 + T 76 -8 -4.08692 | opp_overlap 680551 TATCGCATAAAAAAA CCGTTCTATCAT CTTTGA ATTATAGAACGG TTTTCAACAAACTTG CAB593 680967 - 680641 - | putative transmembrane protein CAB594 681485 - 681081 - | hypothetical protein TERM 616 681573 - 681583 + r 77 -2.6 -5.4477 | TTAATATTAAGGTGC TATT AAA AATA TTTTTTTGCGAATTT CAB595 683066 - 681564 - | hypothetical protein TERM 617 681849 - 681867 + g 76 -4.4 -5.02476 | AGATTCACAACATTT GGGTGAGC GTT GCACAGCC TTTTTTAACGCCTCT TERM 618 683605 - 683587 - H 78 -6 -4.86731 | CTCCTCTAAATAAAA GTTGTTTC TCA GAAACTAC TGAAAATCTTTCTTT TERM 619 683853 - 683843 - H 75 -5.4 -4.82901 | TGTCTTCCATAAAAA CTGT TCG ACAG CAGAGGGTGGCGCTA TERM 620 685914 - 685943 + H 83 -12.1 -2.74244 | overlap 685933 CTAATCTCATCCACC TCCCCTGCTCCGT AGAC ACGGAGCAGGGCC TCCCTTTGTCTACTC TERM 621 686373 - 686400 + G 75 -5.6 -4.75288 | opp_overlap 686379 ATGTTCAAGGTCAAG GAAAAACCTTAG GCAT CTCAGGATTTTC TTTATTTTCATGTGC TERM 622 686394 - 686379 - g 70 -3.2 -4.87893 | opp_overlap 686373 AAGGTCAAGGAAAAA CCTTAG GCAT CTCAGG ATTTTCTTTATTTTC TERM 623 686522 - 686509 - g 81 -6.7 -4.82901 | TGTCTTCCATAAAAA CTGCT CAAC AGCAG AAGGTGGGGCTATCC pmp17G 686033 - 688552 + | polymorphic outer membrane protein clpB 691274 - 688680 - | putative ClpB ATPase stress response protein TERM 624 688927 - 688907 - G 78 -11.1 -3.01712 | CTCGTCTTTCTAACA TGCGTTGGG CAA CCCTACGCA TCTGAATGCCGACGA TERM 625 689585 - 689600 + g 70 -3.3 -4.98255 | opp_overlap 689583, overlap 689583 GTTCTTCCAAGGATT CTTCT AAAACA AGAAG TTTTTCTGCTTCACC TERM 626 689817 - 689847 + g 90 -8.5 -5.01858 | AATACGTTCTGCTTC TTCTTCAGAAAAC TTCAT GTTTTCTAAAGAA TTCTTTTTTTCTTTC TERM 627 689950 - 689978 + g 75 -5.9 -4.75063 | opp_overlap 689940 ATAGACTGTTGCATA GCTTCAGCCTCTT CTT GATAGGCAGGAGC TTTTTCGCGTTTTAT CAB600 692137 - 691334 - | putative ABC transporter component CAB601 692913 - 692137 - | putative ABC transporter ATP-binding protein TERM 628 692650 - 692630 - G 72 -4.7 -4.68124 | overlap 692635 CGAACAGAGAGAAAA TCAAAGAGA GCT CCTCCCTGA AACACCATACCAATA CAB602 693707 - 692922 - | putative permease component of ABC transporter TERM 629 693260 - 693238 - G 71 -7.1 -3.84246 | gap 1 GCGGCAATGACCAAA GCAGGCA-TA GCAA TAGTGCCTGC GATAATCCTGGGTAA TERM 630 693458 - 693444 - G 74 -5 -4.77036 | TTTTACTACGAAAAA TCCTAT AGC ACAGGA CAATCCATGGATTCC TERM 631 693685 - 693671 - G 73 -5.8 -4.59653 | overlap 693667 AAGGAAAAACACAAA GTATTT GGA AAATAC GAGCACGTTTTTTTG hemL 695058 - 693745 - | glutamate-1-semialdehyde aminotransferase CAB604 695720 - 695151 - | hypothetical protein CAB605 696182 - 695742 - | hypothetical protein CAB606 696880 - 696179 - | ribose-5-phosphate isomerase A TERM 632 696386 - 696374 - G 78 -4.1 -5.24531 | opp_overlap 696367 ATTGGTGATAAAAAA TCCTC CAT GAGAA TTTTTTCTTAAATTT CAB607 697085 - 696966 - | hypothetical protein CAB610 700136 - 698886 - | putative transmembrane protein TERM 633 698961 - 698938 - G 72 -9 -3.30908 | gap 1, overlap 698936 698932 698941 GAGTAAATAGGAATA TG-AGAGAGAC TGC GTCTCTCTACA AGCCCTTTCGTGCTT TERM 634 698957 - 698941 - G 77 -10.9 -2.8185 | overlap 698936 698938 698932 TAAATAGGAATATGA GAGAGAC TGC GTCTCTC TACAAGCCCTTTCGT CAB611 701875 - 700457 - | hypothetical protein CAB612 702479 - 703234 + | hypothetical protein TERM 635 703274 - 703295 + F 82 -6.7 -4.93696 | overlap 703286 CTTGGCTTTTTCTTA GAACTTATT TTAT AGTAAGTTC TTTTTACTATTTCAA CAB613 703327 - 705153 + | putative peptidase groES 705281 - 705589 + | co-chaperonin GroES TERM 636 706083 - 706069 - g 73 -5.7 -4.59944 | AGCATCACAAAGAAA TCGCT CAAGT AGCGA CGATTTCTGCTAACA groEL 705639 - 707273 + | chaperonin GroEL TERM 637 707310 - 707345 + F 100 -16.3 -5.1417 | opp_overlap 707310 TCTCTATTCTTACAA GGTCTCCCTTCATCT ATCTCA AGAGGAAGGGAGACC TTTTTCATTTTGTAA TERM 638 707345 - 707310 - f 100 -16.3 -3.31144 | opp_overlap 707310 TCTCTATTCTTACAA GGTCTCCCTTCATCT ATCTCA AGAGGAAGGGAGACC TTTTTCATTTTGTAA TERM 639 707427 - 707437 + G 70 -2.6 -5.10208 | GCATGCTTAAACTTT TAAA GAA TTTA TTTTTGTTAGCATTC CAB616 707378 - 708217 + | hypothetical protein CAB617 708480 - 709103 + | hypothetical protein TERM 640 709928 - 709904 - g 78 -7.1 -4.43189 | overlap 709895 AGGAAGCCCAGAAAA CTCCAGGTTCA ATC TGAATCGGGAG CGCTTCATGGAAACA CAB618 709149 - 710054 + | hypothetical protein CAB619 710871 - 710056 - | hypothetical protein CAB620 710968 - 711987 + | putative inner membrane protein TERM 641 712575 - 712561 - g 70 -8.6 -3.4252 | CTGCACGCATGAGAA TACCCT ACA AGGGTA CCATGATCGTTATCA TERM 642 712831 - 712789 - g 76 -2 -5.43487 | AAATTACAGAAAAAA TCATCGAGAAATTCCGAAAT GAC ACCGCAGATATTCTCGATAA TCAACCCGAAAGATT TERM 643 714230 - 714242 + G 75 -7.7 -3.98683 | TCCTAAGCAGGCTAC TCTCC ACG GGAGA TTTCATTCCTATGCT TERM 644 714592 - 714579 - g 83 -5.3 -5.26875 | GTCGGAACGAAAAAA GCTAT TGCT ATAGC CACAAGAAATGATAA CAB621 712482 - 714680 + | putative exodeoxyribonuclease metG 716351 - 714696 - | methionyl-tRNA synthetase CAB623 716647 - 716351 - | hypothetical protein gmk 717258 - 716644 - | guanylate kinase rnhB 717903 - 717265 - | ribonuclease HII rplS 718325 - 717957 - | 50S ribosomal protein L19 trmD 719417 - 718350 - | fused tRNA (guanine-N(1)-)-methyltransferase/uncharacterized domain-containing protein TERM 645 718495 - 718482 - G 83 -3.1 -5.59502 | TAAAAAACTAAAAAA GTCGT CTTT ACAAC CTAGTCGAAGCGACA rpsP 719792 - 719433 - | 30S ribosomal protein S16 ffh 721126 - 719783 - | signal recognition particle protein CAB629 722004 - 721153 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 646 721978 - 721988 + g 71 -4 -4.84642 | opp_overlap 721960 TAAATAAGCAGCAGC TTCT TTA AGAA TTTTCTTCGTTTCCA prfA 723067 - 721982 - | peptide chain release factor 1 TERM 647 723012 - 722998 - G 72 -4.3 -4.72986 | opp_overlap 722998 TAGGGTTATTAAAAA TCTCT GGATT AGAGA TTTCTACTTCCACTT TERM 648 723448 - 723461 + r 73 -2.4 -5.38054 | opp_overlap 723448 CATTGAAACTTAAAA GAAG AAATTA CTTC TTTTTCTTTATGGGA rpmE2 723781 - 723455 - | 50S ribosomal protein L31 type B TERM 649 724526 - 724538 + G 70 -7.7 -3.66288 | opp_overlap 724525 ACAAGTATAGAAACT CCGAA AGG TTCGG TTGTCTTACGCACTA CAB632 723866 - 724621 + | hypothetical protein TERM 650 724835 - 724845 + F 70 -6.8 -4.09864 | opp_overlap 724826 724827 CCACAATTCCGATTA GGGA AAT TCCC TTTTCGAACCTCCAT TERM 651 725120 - 725131 + G 76 -7.2 -4.17048 | opp_overlap 725120 TCAGCAATTCAGCAA GCGG TACC CCGC TTCTTTTGCAAAAAA TERM 652 725178 - 725191 + G 86 -8.1 -4.89477 | overlap 725177 AAAGCCATTCTTTTT GCTGC CCTA GCAGC TTTTCTTATTCGCCA CAB633 724920 - 726812 + | signal peptidase I TERM 653 726817 - 726842 + T 84 -7.6 -4.60797 | opp_overlap 726817, overlap 726812 AGAAAAAATAAAAAA GAAGACCCTC CTAACA GAGGATCTTC TTTTCTCTATGCAGC TERM 654 726842 - 726817 - T 100 -10.5 -6.07374 | opp_overlap 726812 726817 AGAAAAAATAAAAAA GAAGACCCTCC TAAC AGAGGATCTTC TTTTCTCTATGCAGC ileS 730003 - 726872 - | isoleucyl-tRNA synthetase TERM 655 727837 - 727821 - G 71 -5.1 -4.61231 | overlap 727823 GCAGATTCCCAAAAA CGTCG ACGACAA CGACG AATATACCAATTTGT TERM 656 728979 - 728952 - G 72 -10 -2.64144 | gap 1, opp_overlap 728974 728978, overlap 728951 728949 728974 728977 TCCTCAGTGAAACAG CCATGGT-TATCC ACA GGACAGACCATGG GCACGTGGTGCTCTT TERM 657 728978 - 728992 + g 70 -7.8 -3.64703 | opp_overlap 728952 728951 728949 728974 728977, overlap 728974 CACAGGACAGACCAT GGGCAC GTG GTGCTC TTTGCATACAAAGAA CAB635 730770 - 731279 + | hypothetical protein CAB636 732566 - 731274 - | putative phosphate starvation-inducible protein CAB637 732866 - 733648 + | hypothetical protein TERM 658 734806 - 734791 - g 87 -3.2 -5.71295 | AGAGAAAAAGAAAAA GCAAAC TTTT GTTGGC GAGCTTGAAATTTAT TERM 659 734853 - 734839 - g 70 -2.8 -5.02074 | TCATGTCGTAAAAAA CAATCC CGG GGATTT TTTACTTAAAGATAA CAB638 733793 - 735019 + | hypothetical protein CAB639 735902 - 735021 - | hypothetical protein CAB640 737251 - 736190 - | putative cytochrome D ubiquinol oxidase, subunit II TERM 660 736550 - 736572 + g 70 -7.8 -3.64599 | opp_overlap 736549 ACCAGAAAAATGACC TACTTGGAAA GAG TTTCCATGTA TTTGCGGTATCATGG CAB641 738594 - 737254 - | putative cytochrome D ubiquinol oxidase, subunit I TERM 661 737374 - 737364 - G 81 -5.4 -5.04868 | CCAAACTAAATAAAA TCAG AGA CTGA ATGACTTGTTCTCCG TERM 662 737448 - 737436 - G 75 -7.7 -4.02253 | opp_overlap 737436 TCAATAAGCCATAAA CAACC CAA GGTTG TCTTCCCATTTCTGC TERM 663 738327 - 738315 - G 71 -6.3 -4.21194 | CTTCACTACCTAAAA GTGTT CCA AACAC GTTCCCCGTATATTC CAB642 738793 - 739587 + | hypothetical protein CAB643 739569 - 740852 + | hypothetical protein TERM 664 741820 - 741809 - g 73 -5.8 -4.53303 | overlap 741811 TACTCGCATATAAAA CAGG CAAG CCTG TGATCGCCGTATCCA CAB644 741070 - 742437 + | lipid A biosynthesis lauroyl acyltransferase TERM 665 742417 - 742428 + T 85 -3 -5.88061 | opp_overlap 742399 TCAAAAAATGCTGAA CTTT TGAA AAAG TTTTTTTGATTTTTT pyk 744263 - 742818 - | pyruvate kinase TERM 666 746016 - 745996 - g 80 -11.2 -2.79302 | opp_overlap 745988, overlap 746000 ACTATCCGGAGGAGA GCAAGAGC GTACG GCTCTTGC TAAGCACCTTGGTGC TERM 667 747778 - 747753 - g 75 -2.5 -5.24129 | overlap 747756 CTCTCTTAGAAAAAA TCACTCCACAA ACTC TTGTGGCGAAA CTTCTCCATGAATAT TERM 668 749013 - 748999 - g 70 -8.6 -3.29511 | opp_overlap 748993 CGTATCTCTGGACAA TGAGGA ATA TCCTCA AACTCCCTTTAAACA CAB646 744554 - 749974 + | excinuclease ABC subunit A pknD 752770 - 749969 - | serine/threonine-protein kinase valS 755613 - 752791 - | valyl-tRNA synthetase CAB649 756145 - 755669 - | hypothetical protein atpK 756530 - 756105 - | V-type ATP synthase subunit K TERM 669 756369 - 756350 - GR 79 -5 -5.09245 | overlap 756351 GCAAAAGCATAAAAA TCAATCCA TAGA TGGATTGC GAAGAAGGCATTGCA TERM 670 756368 - 756351 - GR 73 -8.5 -3.6392 | overlap 756350 CAAAAGCATAAAAAT CAATCCA TAGA TGGATTG CGAAGAAGGCATTGC atpI 758614 - 756665 - | V-type ATP synthase subunit I atpD 759231 - 758605 - | V-type ATP synthase subunit D atpB 760532 - 759216 - | V-type ATP synthase subunit B atpA 762314 - 760539 - | V-type ATP synthase subunit A CAB655 763108 - 762308 - | hypothetical protein CAB656 763780 - 763154 - | V-type ATP synthase subunit E TERM 671 764585 - 764575 - g 75 -5.4 -4.83169 | AGGCTTTCAGAAAAA GAAG CTA CTTC TGGGGATATGATCCT CAB657 763888 - 764640 + | hypothetical protein CAB658 765035 - 764655 - | hypothetical protein TERM 672 765051 - 765083 + r 90 -7.1 -5.07486 | overlap 765052 CTTATCTTCTTTAAT TTGCCTTACAGTATT ATT AAAACTTTAAGGCAG TTTTTCTTACACATC TERM 673 765052 - 765082 + r 72 -8.4 -3.63768 | overlap 765051 TTATCTTCTTTAATT TGCCTTACAGTATT ATT AAAACTTTAAGGCA GTTTTTCTTACACAT talA 766073 - 765090 - | transaldolase B rpoC 770368 - 766187 - | DNA-directed RNA polymerase subunit beta' rpoB 774154 - 770396 - | DNA-directed RNA polymerase subunit beta TERM 674 772557 - 772578 + g 79 -6.7 -4.56597 | ATGCGATAAGGAGTT TCAATGAAT CCGA ATTCGTTGA TTTTTGCAAAAGAAG TERM 675 772888 - 772905 + g 78 -4.2 -5.1925 | opp_overlap 772888 AGAAATCAAATAAAT TCATTC TTTCTC GAATGA TTTTTTCCATTCTAG TERM 676 773372 - 773386 + g 71 -4.2 -4.84017 | opp_overlap 773374, overlap 773374 GAGCATACGTTTTAA CATAGC TGT GCTAAG TTTTTCTCCAGCCTT TERM 677 773814 - 773800 - G 70 -8.6 -3.30124 | opp_overlap 773793 CTTTATCCGTCATAA TGGGTA TAG TACCCA TATAGACTTCTTCTT TERM 678 774097 - 774115 + g 100 -4.6 -6.07627 | TTTCAATAAGATTTG GAAGATCT AAG ATATCTTC TTTTTTTTTGACGCT TERM 679 774287 - 774256 - R 100 -11.2 -5.35459 | gap 1, opp_overlap 774262, overlap 774257 ATACATGATAAAAAA GGAAAAGAAAAATCT TAC AGATTTTTC-TTTCC TATAAATTACAAGCC TERM 680 774287 - 774257 - R 100 -13.6 -3.79649 | opp_overlap 774262, overlap 774256 TACATGATAAAAAAG GAAAAGAAAAATCT TAC AGATTTTTCTTTCC TATAAATTACAAGCC TERM 681 774262 - 774282 + r 85 -9.9 -3.86283 | opp_overlap 774256 774257 GATAAAAAAGGAAAA GAAAAATCT TAC AGATTTTTC TTTCCTATAAATTAC rplL 774689 - 774294 - | 50S ribosomal protein L7/L12 TERM 682 774361 - 774372 + g 74 -4.4 -4.87133 | GTTTCCTCAGCATCA GACT TAGA AGTC TTTTCTTTAACAACT rplJ 775243 - 774731 - | 50S ribosomal protein L10 rplA 775955 - 775257 - | 50S ribosomal protein L1 rplK 776403 - 775978 - | 50S ribosomal protein L11 nusG 777060 - 776512 - | transcription antitermination protein NusG secE 777310 - 777065 - | preprotein translocase subunit SecE TERM 683 777115 - 777101 - G 73 -8.6 -3.70109 | TATACCACTTAACAA CGTAAG TAG CTTACG AAACACCAAATCTAC TERM 684 777453 - 777423 - R 100 -12.1 -5.14477 | opp_overlap 777423 TACACACCCAAAAAA GCATGATTAAGAC TGATC ATCTTAATCATGC TTATAAAATCACCTG TERM 685 777423 - 777453 + r 85 -11.4 -3.33162 | opp_overlap 777423 TACACACCCAAAAAA GCATGATTAAGA CTGATCA TCTTAATCATGC TTATAAAATCACCTG tuf 778655 - 777471 - | elongation factor Tu infA 779069 - 778848 - | translation initiation factor IF-1 CAB670 779368 - 780354 + | putative transmembrane protein CAB671 780357 - 780806 + | hypothetical protein CAB672 781922 - 781329 - | putative transmembrane protein TERM 686 782768 - 782786 + G 80 -10.4 -3.76125 | ACGGCCATAAATCTC CATTTTGC TAT GCAAAATG TTTGAATTACGCTAG CAB673 782200 - 783669 + | hypothetical protein TERM 687 783794 - 783781 - T 73 -3.1 -5.16841 | overlap 783775 783782 TGAGAGTAAGAAAAA CCAGA TTCT TCTGA AATCGAGGTGTTAAC TERM 688 783888 - 783833 - T 78 -5.7 -4.94058 | gap 3, opp_overlap 783833 783837, overlap 783837 GGAAGGTAAAGAAAA TCATGACTCCTCAGACAGGGTAGCT-AG AAA CTCAGGCAC-CTGTCTGAGGAAGC-TGA TTTGCGCATTTACAA CAB673A 784267 - 783917 - | putative transmembrane protein CAB674 786021 - 784339 - | putative transmembrane protein TERM 689 785350 - 785332 - G 74 -6 -4.40963 | overlap 785329 785334 ACTTGGGAAAAACAA TCCCTCAG CTC CTGAAGAA TAAGCCAGAGTTGTG CAB676 786860 - 786387 - | hypothetical protein dapA 788501 - 787635 - | dihydrodipicolinate synthase lysC 789836 - 788514 - | aspartate kinase TERM 690 789062 - 789050 - G 70 -3.3 -4.85599 | TTGAGGTGACAAAAA TCGGG ATG CCAGA GCGCACACAAGGAGA TERM 691 789123 - 789095 - G 79 -10.4 -3.53444 | opp_overlap 789091 789095 789098, overlap 789098 GCATCGGTGGGTAAA GAATCTTGGCAC CAAAT GTGGCAAGATTC TGCATTTCTTCAAAA TERM 692 789095 - 789123 + g 73 -10.4 -2.75825 | opp_overlap 789095 789098, overlap 789091 789098 GCATCGGTGGGTAAA GAATCTTGGCAC CAAAT GTGGCAAGATTC TGCATTTCTTCAAAA asd 790825 - 789824 - | aspartate-semialdehyde dehydrogenase dapB 791746 - 791006 - | dihydrodipicolinate reductase TERM 693 792291 - 792303 + G 70 -7.7 -3.67597 | TCACGATTTATTTTG CCATG TTC CATGG TTATTGCATCAAGAA phhA 791950 - 792783 + | phenylalanine 4-monooxygenase TERM 694 793056 - 793078 + G 79 -9.2 -3.92324 | opp_overlap 793056 793058 793060 CATCTTCTCCAGATA TAGAGTATGC ATG GCATACCCTA TTTGATATTAGCCCG TERM 695 793078 - 793056 - g 80 -11.4 -2.87344 | opp_overlap 793056, overlap 793058 793060 CATCTTCTCCAGATA TAGAGTATGC ATG GCATACCCTA TTTGATATTAGCCCG TERM 696 793076 - 793058 - g 72 -9.6 -2.98823 | opp_overlap 793056, overlap 793056 793060 TCTTCTCCAGATATA GAGTATGC ATG GCATACCC TATTTGATATTAGCC CAB682 792770 - 793408 + | putative transmembrane transport protein CAB683 793498 - 794631 + | hypothetical protein TERM 697 794894 - 794884 - g 93 -5.4 -5.69473 | CAGATTATAAAAAAA CTCT TAA AGAG CTCAATCGCCCTATT CAB684 794643 - 795434 + | putative monoamine dehydrogenase/reductase TERM 698 796463 - 796485 + G 83 -6.3 -5.05113 | gap 1 TTTCCCCAATCCATG GTACG-CCTG GCCG CAGGACGTGC TTTTCTTTCTGTGGA bioB 795683 - 796678 + | putative biotin synthase TERM 699 796898 - 796884 - g 82 -8.6 -4.15222 | opp_overlap 796883 ATCTCTCCTAATAAA TCGTGT AGA ACACGA CATTGCTGACTATCA bioF 796657 - 797805 + | putative 8-amino-7-oxononanoate synthase bioD 797790 - 798413 + | putative dethiobiotin synthetase bioA 798407 - 799684 + | putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase CAB689 799666 - 800325 + | hypothetical protein TERM 700 801115 - 801142 + GF 75 -9.9 -2.76711 | gap 1, overlap 801114 TCGGGGGTGATTTTA GCAGC-GCTGCG TTCCT TGCAGCTGCTGC CTTACTTTCTCAATC aroA 800409 - 801746 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroM 801682 - 802203 + | shikimate kinase aroC 802200 - 803279 + | chorismate synthase TERM 701 804306 - 804284 - g 72 -3.4 -5.01732 | opp_overlap 804285, overlap 804285 AACCTCTCCAAAAAA GCCATCAGAA TGG TTATGATGGA AGATGCAGGCAAGGC aroB 803276 - 804415 + | 3-dehydroquinate synthase aroDE 804396 - 805829 + | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein TERM 702 806260 - 806241 - g 70 -2.8 -5.0432 | opp_overlap 806248, overlap 806234 AAGAAAAACAGAAAA CCCTGTTT GTTT ATACAGAG CGTAAACATTCCTCA CAB695 805880 - 806674 + | hypothetical protein TERM 703 807090 - 807078 - g 70 -3.4 -4.98522 | AACTCCATAGAAAAA GAGA CGAAC TCTC AAATTTCTGTGGATT TERM 704 807760 - 807744 - g 70 -8 -3.6579 | overlap 807754 AAGGTACCTGAACAA CCTGTG CAAAC CACAGG ATGGTCACTAAACTT CAB696 806781 - 808127 + | hypothetical protein CAB697 808162 - 808749 + | hypothetical protein TERM 705 809739 - 809727 - g 88 -7.7 -5.14563 | TTCTGCAGCAAAAAA TGGGA CAT TCCCA GAGATTTTCGCTATC TERM 706 810132 - 810114 - g 83 -9 -4.11869 | overlap 810124 GAAAAAAGGCAGAAA TGCAAAAA CAT TTTTTGCA AAAAAAGAGGTTACA arcD 808759 - 810219 + | putative amino acid permease TERM 707 810241 - 810266 + F 89 -11.2 -3.96148 | opp_overlap 810233 GATCTAATCACCCTT TGGGAGAGGC CTTTGC GCCTCTCTCA TTTATCCTCAGGGGA TERM 708 811237 - 811279 + G 83 -9.2 -3.97834 | opp_overlap 811242, overlap 811242 ATTAGTAGGGTAAAA GAAAACCTTTGGTTCCTAGG AGG TTTAGGATCCAAAGGTCTAC TTTATCATGGCCTTA TERM 709 811274 - 811242 - g 93 -10.7 -5.09259 | opp_overlap 811242 811237 TAGGGTAAAAGAAAA CCTTTGGTTCCTA GGAGGTT TAGGATCCAAAGG TCTACTTTATCATGG TERM 710 811242 - 811274 + G 82 -12.1 -3.07455 | opp_overlap 811242, overlap 811237 TAGGGTAAAAGAAAA CCTTTGGTTCCTAGG AGG TTTAGGATCCAAAGG TCTACTTTATCATGG CAB699 810331 - 811371 + | putative oxidoreductase CAB700 812185 - 811361 - | putative transmembrane protein CAB701 813199 - 812207 - | malate dehydrogenase TERM 711 813514 - 813503 - R 78 -5.8 -4.7908 | AAAAATACAAAGAAA GACG TTTG CGTC TTAAGAACTGTTGAA CAB702 813688 - 813545 - | late transcription unit A pgi 815382 - 813787 - | glucose-6-phosphate isomerase xerD 815452 - 816351 + | site-specific tyrosine recombinase XerD CAB705 816647 - 816348 - | lipoprotein CAB706 816999 - 818444 + | putative serine-rich protein CAB707 818444 - 818962 + | low calcium response locus protein CAB708 818981 - 820501 + | hypothetical protein CAB709 820521 - 821999 + | putative serine-rich protein CAB710 822729 - 822007 - | hypothetical protein ispH 823621 - 822692 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 712 823689 - 823660 - R 100 -11 -6.09888 | opp_overlap 823660 GCTTAATAAAAAAAA CCTTTAGAAAAA TACGCT TTTTTCTAAAGG TTTCTAAGTATAACT TERM 713 823660 - 823689 + r 89 -11 -3.9534 | opp_overlap 823660 GCTTAATAAAAAAAA CCTTTAGAAAAA TACGCT TTTTTCTAAAGG TTTCTAAGTATAACT CAB712 825542 - 823731 - | hypothetical protein TERM 714 824083 - 824071 - G 77 -7.7 -4.20783 | ATCGCAGGCAATAAA TCTCC ACA GGAGA AATCCTCTTCATTGA TERM 715 824916 - 824899 - G 74 -6.3 -4.3851 | opp_overlap 824914, overlap 824881 GATATCAAAGATAAA TCCCGAA TATG TTCAGGA GTATGACGCCATTTA TERM 716 825605 - 825629 + r 91 -5.9 -5.52384 | opp_overlap 825604 825605 TAGAGGTATAAAGAT TTTATTAAAAC AAA GTTTTAAAAAA TTTTTTTACTCAAAA CAB713 826917 - 825655 - | putative Na+/H+ antiporter TERM 717 825961 - 825945 - G 74 -3.7 -5.10208 | TAAGGCCAATAAAAA TAGCAAC CAC GTTCCTA GAAAATATTCTATCC TERM 718 826741 - 826725 - G 100 -5.1 -6.59152 | overlap 826729 CGAATAAAAAAAAAA TGACCTG AGC CATGTCA GCAATTTCTTCAGCT TERM 719 828811 - 828764 - g 86 -2.3 -5.88471 | opp_overlap 828808, overlap 828766 CAGGAGTAAAAAAAA CACCACTAAG-TGATCTCAAACG TTAT CATTT-AGATGAACTTATTGGTG TTGATCACATCTTTT CAB714 827194 - 828894 + | putative sulfate transporter fumC 830273 - 828891 - | fumarate hydratase TERM 720 832021 - 832039 + Gr 79 -8.2 -4.03234 | opp_overlap 832020, overlap 832022 AGCGCTATCCAAACT TTGAGGAT AAA ATCCTCAG TTTCTCTCCAGAGCA TERM 721 832022 - 832038 + Gr 74 -9.5 -3.01726 | opp_overlap 832020, overlap 832021 GCGCTATCCAAACTT TGAGGAT AAA ATCCTCA GTTTCTCTCCAGAGC CAB717 832716 - 832066 - | hypothetical protein CAB716 830325 - 832157 + | putative ABC transporter permease component CAB718 832807 - 833415 + | putative transmembrane protein TERM 722 833544 - 833558 + G 73 -7.2 -4.06487 | opp_overlap 833543, overlap 833543 AAGGCAACAACGCAT CATTCT CAG AGAATG TATTTTTGCTCTTGT CAB719 833428 - 834036 + | putative transmembrane protein TERM 723 834158 - 834142 - g 75 -5.9 -4.72127 | GAACAACAAAAACAA TATTACG CTT CGCAATA CGATATTATTTTAAA CAB720 834046 - 834918 + | methionine aminopeptidase CAB721 836149 - 834875 - | hypothetical protein TERM 724 834979 - 834998 + g 72 -3.6 -5.06116 | TCTCAATGTCTCTCA TGTCTGTA AAGG TAGAGACA TTTTCTTCTTGTTTT TERM 725 835308 - 835321 + g 79 -5.3 -5.10461 | opp_overlap 835308 CATTGATCTTCTAAA CTCTT CCTT AAGAG TTTTTCTTCGATAAG CAB722 836347 - 836162 - | hypothetical protein TERM 726 836453 - 836439 - H 71 -7.2 -3.86015 | opp_overlap 836431 836446, overlap 836446 TATTTTCTTTAGAAA CTCTAA ATT TTAGAG ATAAAAACTTTTTTA CAB723 836615 - 837118 + | hypothetical protein TERM 727 837123 - 837107 - f 71 -5.1 -4.59212 | AACCAATTAAATAAA CCTCCTT CAT AAGCAGG TAGGGAAACAACTTA CAB724 837170 - 837688 + | hypothetical protein CAB725 837708 - 838238 + | hypothetical protein CAB726 838319 - 839026 + | hypothetical protein CAB727 839253 - 839023 - | hypothetical protein CAB728 839716 - 839243 - | putative cytidine/deoxycytidylate deaminase family protein TERM 728 839818 - 839797 - H 72 -3.7 -4.97461 | AAGAAATAGTAAAAA GTCGTCATA TTAG TTTAACGAC CATTTTTCAATGAGA rpsO 839957 - 840226 + | 30S ribosomal protein S15 TERM 729 840654 - 840670 + G 77 -8.7 -3.87869 | CACTCTTCCTGATCC CATCGCA ATT TGCGGTG TTTCTGCAGCCTTAG TERM 730 840769 - 840747 - g 72 -8.5 -3.61398 | CGGCTTTGTGAACAA TCGTTGGGT AGTTA ACCCAACAA AAGCGGAAATGGACG TERM 731 842199 - 842219 + G 74 -9.1 -3.61601 | overlap 842197 TGTTGAAATTCTCCC TGGTAAAGA AGG TCTTTGCCA TATTTCTGAATTTTC pnpA 840274 - 842358 + | polynucleotide phosphorylase/polyadenylase TERM 732 842432 - 842417 - T 100 -10.4 -6.38655 | opp_overlap 842417 AAAGATAAAAAAAAA GCCCCT AGTT AGGGGC TTTTCACATCAGTAC TERM 733 842417 - 842432 + T 89 -10.4 -4.14739 | opp_overlap 842417 AAAGATAAAAAAAAA GCCCCT AGTT AGGGGC TTTTCACATCAGTAC TERM 734 842439 - 842472 + T 86 -10.5 -3.81879 | opp_overlap 842444 842449 GTTAGGGGCTTTTCA CATCAGTACATAATC TATA GATTATGTAGTGGTG TTATTGAGTTTTAAC CAB731 845201 - 842460 - | putative cell division protein TERM 735 843455 - 843445 - G 76 -6.8 -4.32436 | ACACGACGATCAAAA CGTC CAG GACG CAATAAAGCCTTATC TERM 736 843770 - 843784 + g 70 -3.6 -4.87626 | opp_overlap 843767 843770 CTTCTCCAGAAACAG CTTTAG CTA TTAAAG TTTTTCCTGTTCCAG CAB732 846328 - 845375 - | hypothetical protein CAB733 846442 - 847515 + | hypothetical protein TERM 737 847547 - 847557 + G 70 -5.4 -4.4773 | AACGTTATGTGTTAA CCAA GTT TTGG TTTTCCTTGGTATCA TERM 738 848215 - 848231 + G 71 -3.7 -4.90296 | CCTGAAATTGAATTT GGATTTT ACG ATAATCC TTTTTCTAAAATTTT CAB734 847519 - 848622 + | hypothetical protein CAB735 850639 - 848609 - | hypothetical protein TERM 739 850895 - 850905 + r 70 -6.8 -4.07885 | overlap 850887 850902 ACCCCCGGACCCTTT CAGG TCT CCTG TTTTCAAGACAGGTG pheS 851971 - 850946 - | phenylalanyl-tRNA synthetase subunit alpha rplT 852346 - 851984 - | 50S ribosomal protein L20 rpmI 852562 - 852368 - | 50S ribosomal protein L35 infC 853082 - 852540 - | translation initiation factor IF-3 TERM 740 853258 - 853240 - H 74 -3.8 -5.08255 | ATCCTTAAAAGAAAA GCAATTGA AAT CCCATTGC CCAACAGCTTGTTTG nusB 853495 - 853989 + | transcription antitermination protein NusB murB 854027 - 854917 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 741 855228 - 855238 + T 74 -4 -5.1963 | opp_overlap 855228 GACATCTCTTTAAAT TCTA TAA TAGA TTTTTCTTCATTGGA TERM 742 855297 - 855274 - T 95 -8.2 -4.74285 | opp_overlap 855274 ACGTAGAACACAAAA GAGAAGCCCT CATC AAAGCTTCTC TTTGTACATCATAAG trmB 856272 - 855598 - | tRNA (guanine-N(7))-methyltransferase TERM 743 855991 - 855969 - G 71 -7.1 -3.9392 | opp_overlap 855978, overlap 855966 CTTCACCGCAAACAA TCCTCAAGT TTCTC ACTTGAGAA TTATGCATTTTAGAC TERM 744 856415 - 856391 - R 100 -15.1 -6.00086 | opp_overlap 856394 ATATCAGAAAAAAAA CGACCTTTGGG AAT CCCAAAAGTCG TTAAAGTACGTGTAT CAB744 857498 - 856449 - | ribonucleotide-diphosphate reductase subunit beta TERM 745 856994 - 856984 - G 71 -4 -4.8543 | GAATTCGTAGAAAAA TTAG GGT CTAA AACATCCCCAGTCAA CAB745 860650 - 857513 - | ribonucleotide-diphosphate reductase subunit alpha TERM 746 857627 - 857650 + g 89 -9 -4.83169 | TCTAGGTTGAATTCC TCGTTTATTG ATAT CAGTAAACGA TTTTTCTACAGAGGT TERM 747 857773 - 857794 + g 70 -2.9 -5.1523 | overlap 857774 ATAAATATAAATTGA GGGATTGAC CCAT GTCTATCCA TTTTTGTCTTCTAGA TERM 748 860098 - 860109 + g 75 -3 -5.24129 | TATCTTGTATGACTT CTAT ATCA ATAG TTTTTTCTGGAGAAC TERM 749 860557 - 860573 + g 70 -9.5 -2.65409 | opp_overlap 860556 860553, overlap 860556 TATCACGAAAAGCAG CTTCCAA AGC TTGGAAG ATTCGTTCCTGATTG CAB746 861026 - 861832 + | putative phospholipid biosynthesis-related membrane protein CAB747 861829 - 863067 + | putative DNA recombination protein CAB748 865995 - 863071 - | putative metalloprotease TERM 750 865792 - 865782 - G 71 -6.8 -4.0616 | TACTGGAACCACAAA GCAC CAT GTGC TCTAAAACGTGAGCC CAB749 866145 - 867509 + | putative peptidase TERM 751 867541 - 867507 - T 100 -13.8 -3.1012 | opp_overlap 867515, overlap 867515 AAATTCGCAAAAGCA TAAAAAAAGCACTCTC TTA GAGAGTGCTTTCATTA AAGTTATGGAATGTG TERM 752 867533 - 867515 - T 100 -13.2 -5.77632 | opp_overlap 867515, overlap 867507 AAAAGCATAAAAAAA GCACTCTC TTA GAGAGTGC TTTCATTAAAGTTAT TERM 753 867515 - 867533 + T 100 -13.2 -3.9377 | opp_overlap 867507 867515 AAAAGCATAAAAAAA GCACTCTC TTA GAGAGTGC TTTCATTAAAGTTAT CAB750 869034 - 867568 - | putative heat shock-related exported protease TERM 754 868366 - 868391 + g 72 -8.4 -3.52204 | overlap 868370 CTGAATAAAATCTTC GAAATCGGCT ATATGC AGCTGATTTC TTCCTTTAGCACTAA sucD 870245 - 869370 - | succinyl-CoA synthetase subunit alpha sucC 871420 - 870260 - | succinyl-CoA synthetase subunit beta TERM 755 871228 - 871216 - G 70 -7.7 -3.65201 | opp_overlap 871216 CAACAGCTGCAAGAA TCTCC TCA GGAGA TTTAGCAACAATTAC TERM 756 872285 - 872268 - g 70 -5.5 -4.39828 | opp_overlap 872267 872268, overlap 872258 872255 872250 AAGATCCCTACAAAA TTCGTCG GCTA CGGCGAA CTTATAGGGGATCTT CAB753 871491 - 872351 + | putative cell division protein CAB754 873082 - 872366 - | hypothetical protein CAB755 874324 - 873137 - | putative tyrosine-specific transport protein glmS 876223 - 874394 - | D-fructose-6-phosphate amidotransferase TERM 757 874429 - 874447 + g 76 -4.6 -5.00884 | overlap 874444 TTGCCAAATTCCTAG GGCAAT CTATCTC ATTGCC TTTTTTCAAAGCCAT TERM 758 875764 - 875754 - G 75 -5.4 -4.80882 | AGGCCACACGAAAAA CTTC CCT GAAG TTGAGATAAGGTCCA CAB757 877608 - 876232 - | putative phosphoglucomutase TERM 759 877366 - 877342 - G 71 -6.4 -4.1711 | AGCACGGGTAATAAA CGCCACTCCT GGAGT AGGAATGGGG CCCAACACTAAGGTT TERM 760 877643 - 877655 + H 78 -7.7 -4.26881 | TTCTCAACAGATTCA GAGTG ATG CACTC TTTCGTTTTGTAACA TERM 761 877726 - 877702 - H 73 -9.5 -2.84459 | opp_overlap 877702 AACACTATTAGGATA TTCTTAAACAG CAA CTGTTTAAAAA TTATTGAATTTGAAG CAB758 878219 - 879505 + | putative poly(A) polymerase lpxB 879519 - 881402 + | lipid-A-disaccharide synthase CAB760 882270 - 881695 - | TMH family membrane protein CAB761 883365 - 882295 - | TMH family membrane protein TERM 762 883536 - 883513 - R 84 -4.4 -5.53436 | opp_overlap 883513 883504 ATAGAACACAAAAAA GGCTCCAAAC ATAA GCAAGGAGCC TTTTTTGACATTTTA TERM 763 884651 - 884621 - R 100 -8.4 -5.77853 | opp_overlap 884621 884622, overlap 884622 AATGGCTAAAAAAAA CCTCGACCCTAT TTACCCC ATAGAGTCGAGA TTATACTAATTTAAA TERM 764 884650 - 884622 - R 86 -9.7 -4.05085 | opp_overlap 884621 884622, overlap 884621 ATGGCTAAAAAAAAC CTCGACCCTAT TTACCCC ATAGAGTCGAG ATTATACTAATTTAA CAB764 886109 - 884700 - | TMH family membrane protein TERM 765 886433 - 886399 - R 88 -10.9 -3.72588 | opp_overlap 886403 TAAGCCATAGGGAAA TTAAGGACTTCCAAC TATTT GTGGAAAGTCCTTAA TTAGAATATGAGGTT CAB766 887265 - 886492 - | TMH family membrane protein TERM 766 887606 - 887572 - R 81 -9.5 -3.72588 | opp_overlap 887576 TAAGCCATAGGGAAA TTAAGGACTTTCAAC TATTT GTGGAAAATCCTTAA TTAAAGTATGAGATG TERM 767 889405 - 889415 + r 70 -5.4 -4.51174 | GAGAGTACACGATCT TCTG TCT CAGA TTTTCGTTGTGCTAA TERM 768 890160 - 890133 - R 71 -7.1 -3.90949 | opp_overlap 890136 890146, overlap 890136 AAATACGAAATAGAA TAAGCTTCACA ATTAGG CGTGAAGCCTA TTTATAGAACAAGAT TERM 769 890157 - 890136 - R 70 -6.6 -4.05193 | opp_overlap 890136 890146, overlap 890133 TACGAAATAGAATAA GCTTCACA ATTAGG CGTGAAGC CTATTTATAGAACAA CAB771 891246 - 890185 - | TMH family membrane protein CAB772 892951 - 891524 - | TMH family membrane protein CAB773 893505 - 894779 + | hypothetical protein TERM 770 894812 - 894800 - f 77 -2.7 -5.48303 | AGAATTGCAAAAAAA TCTTC ACA AAAGA CACAAATAATCTTTG TERM 771 895856 - 895836 - g 72 -9.1 -3.41978 | opp_overlap 895836 895839, overlap 895839 GTAGAAGTTAACCAA CAACTCTCT AGT AGAGAATTG TTAAATAGTTTGTAT CAB774 894981 - 897803 + | hypothetical protein TERM 772 898573 - 898561 - g 72 -3.3 -5.09762 | GTTGAAGAAATAAAA CGATC TAT GCTCG GAAATCTAACCCATG CAB775 898177 - 899478 + | hypothetical protein TERM 773 899505 - 899528 + T 100 -7.4 -5.46698 | opp_overlap 899505 TAAACAATAAAAAAA GCGCTGTGAG AGAT TTCACAACGC TTTTTTGCTTTTACA TERM 774 899528 - 899505 - T 100 -8.9 -6.01369 | opp_overlap 899505 TAAACAATAAAAAAA GCGCTGTGA GAGATT TCACAACGC TTTTTTGCTTTTACA pmp18D 904163 - 899562 - | polymorphic outer membrane protein TERM 775 902223 - 902235 + g 76 -3.4 -5.26119 | CCCAAACAAAGCTCC TCCT CCTAA AGGA TTTTCTTTTTGCGCC TERM 776 903587 - 903562 - G 70 -8.3 -3.29263 | opp_overlap 903562 903564 903566, overlap 903564 903566 ACATCTTCTTCAGAA TACACAGCTGC TCCT GCAGCTGTAGA TTTTAAGTTAGTGAA TERM 777 903562 - 903587 + g 71 -6.1 -4.30014 | opp_overlap 903562 903564 903566, overlap 903564 903566 ACATCTTCTTCAGAA TACACAGCTGC TCCT GCAGCTGTAGA TTTTAAGTTAGTGAA TERM 778 903585 - 903564 - G 79 -10.9 -3.21395 | opp_overlap 903562 903564 903566, overlap 903562 903566 ATCTTCTTCAGAATA CACAGCTGC TCCT GCAGCTGTA GATTTTAAGTTAGTG TERM 779 903583 - 903566 - G 82 -11.3 -3.17146 | opp_overlap 903564 903562 903566, overlap 903564 903562 CTTCTTCAGAATACA CAGCTGC TCCT GCAGCTG TAGATTTTAAGTTAG TERM 780 903566 - 903583 + g 80 -11.3 -2.77861 | opp_overlap 903566 903564 903562, overlap 903564 903562 CTTCTTCAGAATACA CAGCTGC TCCT GCAGCTG TAGATTTTAAGTTAG CAB777 905218 - 904268 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 781 905193 - 905164 - G 79 -10.1 -3.56092 | overlap 905167 905168 TTAGCACTTCCCAAA TAACGAGAGGAGA GTGG TCTCCTCCCATCA GATCTATGCCAATTT TERM 782 905190 - 905167 - G 83 -9.6 -3.91716 | overlap 905164 905168 GCACTTCCCAAATAA CGAGAGGAGA GTGG TCTCCTCCCA TCAGATCTATGCCAA TERM 783 905189 - 905168 - G 78 -10.9 -2.94708 | overlap 905167 905164 CACTTCCCAAATAAC GAGAGGAGA GTGG TCTCCTCCC ATCAGATCTATGCCA rpmF 905416 - 905234 - | 50S ribosomal protein L32 TERM 784 905439 - 905460 + r 100 -8.1 -5.08878 | gap 1, opp_overlap 905445, overlap 905445 ACCTTTTATAAATTA TCGAAAGGGG TTT CCCCTTT-GA TTTTCTTTCTATCTT TERM 785 905455 - 905445 - R 74 -8.2 -3.75295 | opp_overlap 905439 905445 TATAAATTATCGAAA GGGG TTT CCCC TTTGATTTTCTTTCT TERM 786 905445 - 905455 + r 86 -8.2 -4.39227 | opp_overlap 905445, overlap 905439 TATAAATTATCGAAA GGGG TTT CCCC TTTGATTTTCTTTCT CAB779 905890 - 905429 - | hypothetical protein CAB780 906201 - 907733 + | putative ribonuclease CAB781 907736 - 908737 + | putative glycerol-3-P acyltransferase TERM 787 911289 - 911303 + G 70 -2.8 -5.04325 | overlap 911281 TGTGGAAGACTTTGG TATGTC AGA GTCATA TTTTTCTGATTTAAA CAB782 908740 - 911550 + | putative exported peptidase CAB783 912907 - 911555 - | hypothetical protein CAB784 914182 - 913307 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 788 914105 - 914127 + g 82 -8.5 -4.13945 | TTGATATAGGGTAGT CATCTCGTG AAAGC CATGAGATG TTTTGCCGTGAAGCT TERM 789 914222 - 914201 - R 75 -10.1 -2.88663 | opp_overlap 914199 914198 914201, overlap 914187 ACCTATTTTTATATA GGCGAGGAG CAGA CTCCCCACC TTGCCTAATTTAATT rplI 914745 - 914227 - | 50S ribosomal protein L9 rpsR 915029 - 914766 - | 30S ribosomal protein S18 TERM 790 914869 - 914882 + g 74 -5.3 -4.68593 | CCTGTAATTCTTCTA GGTAA GATC TTACC TTTTTCCGTGATAAA rpsF 915385 - 915047 - | 30S ribosomal protein S6 pth 916014 - 915463 - | peptidyl-tRNA hydrolase rplY 916580 - 916023 - | 50S ribosomal protein L25/general stress protein Ctc TERM 791 916993 - 916962 - H 81 -9.6 -3.76176 | opp_overlap 916986 916987 916987, overlap 916951 CAAAGTGACTAAGAA TTTCGCCACAAC ATCAAGTG GTTATGGCGAAA AATCGCCCTTTTCGT glgA 917069 - 918496 + | glycogen synthase CAB791 919092 - 918478 - | putative phosphatidylglycerophosphate synthase TERM 792 920118 - 920130 + G 75 -7.7 -4.01737 | opp_overlap 920118 CGATTTTGTTATTAA GGCAT CTC ATGCC TTTAATATTCTTGAT TERM 793 920854 - 920870 + G 79 -5.8 -4.98531 | TTAGTTTCTCTATAT GGGACC TCTGT GGTTCC TTTTTCCTTTGGAAA glyQ 919393 - 922410 + | glycyl-tRNA synthetase alpha chain TERM 794 922452 - 922423 - T 100 -6.6 -6.35605 | gap 2, opp_overlap 922423 TAAGAGAAAAAAAAA GTGGCC-T-GATAG GTGC CTATCTATGGCCAC TTTCTCAATTCTAAA CAB793 922958 - 922479 - | hypothetical protein CAB794 923559 - 923044 - | hypothetical protein TERM 795 923737 - 923706 - R 73 -8.9 -3.42861 | opp_overlap 923706, overlap 923693 AACTTATAATATTAA TTATCAGGCATTT GGAAGT ATATGCCTGATAA TTTTCGACCATAACA TERM 796 923706 - 923737 + r 85 -9.6 -4.09685 | opp_overlap 923693 923706 AACTTATAATATTAA TTATCAGGCATTTG GAAG TATATGCCTGATAA TTTTCGACCATAACA CAB795 924273 - 923761 - | hypothetical protein CAB796 924694 - 924419 - | hypothetical protein dnaG 926574 - 924799 - | DNA primase TERM 797 925395 - 925383 - G 85 -9.1 -4.15703 | opp_overlap 925383 GTTCATAAACAACAA TGGGG TTC CCCCA TTTTTTAATTTGTGT TERM 798 925383 - 925395 + g 95 -9.1 -5.4387 | opp_overlap 925383 GTTCATAAACAACAA TGGGG TTC CCCCA TTTTTTAATTTGTGT TERM 799 926388 - 926368 - G 93 -9.7 -4.75372 | ATGATTCATTAAAAA GCTAATGGC ATC GCCATGAGC TCCGCAGCCAAAACA TERM 800 926908 - 926892 - g 88 -2.9 -5.90981 | overlap 926895 TGACATCAAAAAAAA CTACACC TAT GATGAAG CAATGGCATCAATGT TERM 801 928296 - 928308 + G 72 -9.1 -3.322 | opp_overlap 928268 928266 TTAAAGTTTGTTACT CCCAG GCG CTGGG TTACTATATAGAAGT TERM 802 928934 - 928920 - g 84 -10 -3.89822 | opp_overlap 928919 CATTTATGGTAGAAA TGGCAG AAA CTGCCA ATATCCTACATAATG TERM 803 929082 - 929066 - g 74 -3.7 -5.16572 | ACTGAAGGGAAAAAA GCAAAAA CAC TGTTTGC AACGCACTATAAAGA mutS 926876 - 929356 + | DNA mismatch repair protein TERM 804 929344 - 929333 - f 83 -5.8 -5.10208 | CAACCTCAAGAAAAA GAGC TGCA GCTC ACATTGTTTTAAATC TERM 805 929481 - 929464 - g 91 -6.3 -5.37593 | CGGGAAAGCAAAAAA CTTACGC AATC GCATAAG CACCTACTTTCGCAA TERM 806 930184 - 930214 + G 71 -6.8 -4.08945 | opp_overlap 930194, overlap 930185 ATTAACAATCCGTTC TGGGAAGTTACTCG GAG CGCGTCATTTCCCG TTTTCAGAAAATGCT uvrC 929360 - 931174 + | excinuclease ABC subunit C CAB800 931644 - 931183 - | hypothetical protein CAB801 931762 - 932268 + | hypothetical protein rpsN 932630 - 932325 - | 30S ribosomal protein S14 TERM 807 932490 - 932502 + g 79 -3.4 -5.44638 | TTTCATTTTATTCAG TGCA ACACG TGCA TTTTCTTTTTCTTCT TERM 808 932549 - 932560 + g 95 -4.4 -5.71983 | TTTTTGCAATTTTAC GAAG CTCG CTTC TTTTTTTGTAGTTCG rpmJ 932793 - 932656 - | 50S ribosomal protein L36 CAB805 934615 - 933569 - | hypothetical protein rnpA 933208 - 933627 + | ribonuclease P cysS 935046 - 936476 + | cysteinyl-tRNA synthetase lysS 938053 - 936473 - | lysyl-tRNA synthetase TERM 809 938268 - 938228 - R 100 -9.9 -4.73864 | opp_overlap 938231 938234, overlap 938229 938231 938234 938263 938264 TTAATTAAGAGAAAA TGAGAACTTTAGAGAGGAA AAC CTCCTCTCTAAAATTCTTT AAGAAGAAATTCGCT TERM 810 938267 - 938229 - R 95 -13.4 -3.43234 | opp_overlap 938231 938234, overlap 938228 938231 938234 938263 938264 TAATTAAGAGAAAAT GAGAACTTTAGAGAGGAA AAC CTCCTCTCTAAAATTCTT TAAGAAGAAATTCGC TERM 811 938231 - 938265 + r 100 -13.1 -3.53761 | opp_overlap 938229 938228 938231 938234 938263 938264, overlap 938234 ATTAAGAGAAAATGA GAACTTTAGAGAGGA AAACC TCCTCTCTAAAATTC TTTAAGAAGAAATTC TERM 812 938265 - 938231 - R 100 -16 -3.26743 | opp_overlap 938231 938234, overlap 938229 938228 938234 938263 938264 ATTAAGAGAAAATGA GAACTTTAGAGAGGAA AAC CTCCTCTCTAAAATTC TTTAAGAAGAAATTC TERM 813 938262 - 938234 - R 93 -11.9 -3.74916 | opp_overlap 938234 938231, overlap 938231 938229 938228 AAGAGAAAATGAGAA CTTTAGAGAGGAA AAC CTCCTCTCTAAAA TTCTTTAAGAAGAAA TERM 814 938234 - 938262 + r 80 -9 -3.90744 | opp_overlap 938231 938229 938228 938234, overlap 938231 AAGAGAAAATGAGAA CTTTAGAGAGGA AAACC TCCTCTCTAAAA TTCTTTAAGAAGAAA CAB808 938797 - 938282 - | hypothetical protein TERM 815 938339 - 938355 + g 72 -9.5 -2.93572 | overlap 938338 CTCACCACCGCCGTA CTCGAAT CCC ATTCGAG CTTTCTCGACTCCAT TERM 816 939163 - 939144 - gH 73 -2.2 -5.24129 | GTTGCTGATAAAAAA TTAGACAA GCCT TTATCCAA TCCAGTTCAAGATAG CAB809 938961 - 939674 + | hypothetical protein TERM 817 940234 - 940214 - gT 70 -8.3 -3.28001 | opp_overlap 940213 940217, overlap 940217 GATCTTGAAATTCAA GAAGATCGT CTT ACGTTCTTC CTTCCTGAAGCCCAT TERM 818 940315 - 940328 + GT 77 -5.3 -4.87626 | ATCTTCAGGGAAATT TCAGA CACA TCTGA TTTTTGGTGTTACAG TERM 819 941562 - 941550 - gT 78 -7.7 -4.2704 | opp_overlap 941549 941550 TTTACCACCAAGAAA TCCCT GGG AGGGA ATTGTGCAGCTACCC TERM 820 941781 - 941763 - gT 74 -3.8 -5.08088 | overlap 941764 941767 AATTTTTAATAAAAA GCAAGCAA GTT TTGCCTGT AAATAAAAAACTCCA CAB811 942913 - 941807 - | 8-amino-7-oxononanoate synthase CAB810 939626 - 941875 + | primosome assembly protein PriA TERM 821 942706 - 942696 - GT 72 -4.6 -4.77165 | opp_overlap 942696 CTGTGCACAACAAAA GCAG CCT CCGC TTGATGGAATTGTGC CAB812 944610 - 942964 - | long chain fatty acid--[acyl-carrier-protein] ligase CAB813 945364 - 944603 - | hypothetical protein TERM 822 945035 - 945045 + g 93 -5.4 -5.55698 | ATAGAAATGTTCCAT CTGT TCG ACAG TTTTTTTACATTCTC TERM 823 946246 - 946256 + G 85 -6.8 -5.14563 | opp_overlap 946232 AGAGCGTGGGATCAT GCTC CAG GAGC TTTTTTAGTAGAAGA CAB814 945472 - 946452 + | putative sulfur metabolism-related protein TERM 824 946437 - 946466 + T 86 -6.6 -5.09204 | gap 1, opp_overlap 946437 TGTTTCTGAAGAAAA CTTGCTAGCTTAC TAAAT GTAAGCT-GTAAG TTTTTCTTCCACTAT CAB815 947498 - 946449 - | putative leucine dehydrogenase CAB816 947666 - 948316 + | inorganic pyrophosphatase TERM 825 948328 - 948346 + T 95 -13.2 -3.29013 | overlap 948323 ATAACTCATGTTTCT GGAGAGGA GGC TCCTCTCC TTACATTCTTCAACT CAB817 948810 - 948361 - | hypothetical protein fabF 950063 - 948813 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 826 950037 - 950051 + g 75 -2.8 -5.1861 | AACAACGCCCAATCC CGTG ACAACTA CACG TTTTTTACTCATAAA CAB819 950440 - 950081 - | hypothetical protein CAB821 952800 - 951136 - | hypothetical protein TERM 827 953566 - 953585 + G 73 -5.7 -4.48823 | AAGCTCTCAGGGACG CTCAGGA CGAAAC TCCTGGG TTTTATAGCTTCATT CAB822 952890 - 953951 + | hypothetical protein miaA 954886 - 953942 - | tRNA delta(2)-isopentenylpyrophosphate transferase CAB825 955314 - 954982 - | putative anti sigma factor antagonist CAB826 955390 - 956178 + | hypothetical protein CAB827 956175 - 956519 + | putative divalent cation tolerance protein TERM 828 956559 - 956582 + F 84 -4.6 -5.42862 | CTTTTCAGGAACTTT GAATGATGCA TAAG TGCTTTATTC TTTTTTTCCACATCT CAB828 956616 - 957044 + | hypothetical protein CAB829 959542 - 957110 - | putative bifunctional cell division-related protein (includes: UDP-N-acetylmuramate--L-alanine ligase and D-alanine--D-alanine ligase murG 960627 - 959551 - | N-acetylglucosaminyl transferase CAB831 961690 - 960536 - | putative exported cell division protein CAB832 962437 - 961709 - | hypothetical protein murD 963696 - 962434 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 829 962902 - 962912 + g 70 -5.4 -4.31379 | opp_overlap 962902 962900, overlap 962904 AGCCTGTAAAAACGA TTCC AAA GGAA TTTTGGTCACTTCAT mraY 964743 - 963700 - | phospho-N-acetylmuramoyl-pentapeptide-transferase CAB835 966107 - 964761 - | putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 830 965889 - 965872 - G 70 -7.7 -3.68244 | opp_overlap 965872 ACGATTAATTCTAAA CCAAAGG AATC CCCTTGG TAATCTTTAGACACA TERM 831 966943 - 966962 + G 77 -4.9 -4.84527 | CCAGATTTAACGATT GCCACAG AAATGG CTGAGGC TTTTTCATCTGTCGG CAB836 966499 - 968025 + | putative chaperonin TERM 832 968146 - 968195 + F 70 -6.5 -4.13767 | opp_overlap 968150, overlap 968148 968149 AAAGCTGTTAATAAG AAAATCCCGACTCAGTACTATAA GTCT TTTTAGTACTGAGTCCGGAAATA TTTTAGAATGAGAAC TERM 833 968148 - 968193 + F 78 -9.1 -3.6692 | opp_overlap 968150, overlap 968146 968149 AGCTGTTAATAAGAA AATCCCGACTCAGTACTATAA GTCT TTTTAGTACTGAGTCCGGAAA TATTTTAGAATGAGA TERM 834 968149 - 968192 + F 86 -12.6 -2.79831 | opp_overlap 968150, overlap 968148 968146 GCTGTTAATAAGAAA ATCCCGACTCAGTACTATAA GTCT TTTTAGTACTGAGTCCGGAA ATATTTTAGAATGAG TERM 835 968191 - 968150 - f 100 -16.1 -4.89477 | opp_overlap 968149 968148 968146 CTGTTAATAAGAAAA TCCCGACTCAGTACTATAA GTCT TTTTAGTACTGAGTCCGGA AATATTTTAGAATGA CAB837 968398 - 969279 + | hypothetical protein CAB838 969587 - 969330 - | hypothetical protein efp 970182 - 969610 - | elongation factor P TERM 836 969931 - 969945 + g 70 -8.6 -3.2794 | TGTTTTATCATCCAT GAAGGT AGC ACCTTC TTGATCTGAATAAAG CAB840 970386 - 971261 + | AMP nucleosidase CAB841 973252 - 971255 - | transketolase TERM 837 971326 - 971304 - G 77 -9.8 -3.48807 | overlap 971297 GCAGTAAATCCACAA GCTTCCGCTA CAT CAGCGGGAGC TCCAGAATAACCGAA TERM 838 973333 - 973320 - H 71 -4.5 -4.77438 | ATGCATTACCAAAAA GCAAG ACTA CTCGC AATATAAGATCCCTT TERM 839 973694 - 973678 - gH 72 -4.4 -4.78326 | overlap 973679 TTTTAAACAAAGAAA CCGTGA GCTAT TCACGA GCTACAACGTCTCAA TERM 840 974518 - 974545 + GH 83 -11.4 -3.00994 | overlap 974520 974522 TGGTTGACGCTATGG GAGAGGCGTA TCCCGAAT TACGCCTCTC TGTATCTCAAATTCA TERM 841 975016 - 974992 - gH 72 -4.3 -4.68655 | TAATCTTAAAAGAAA CCCCCTTCT ATGCAGA AAAAGGAGG TCAGGTTGGTGATTC alaS 973518 - 976145 + | alanyl-tRNA synthetase TERM 842 979121 - 979150 + GF 80 -10 -3.61089 | opp_overlap 979109 979114 979117 AAAGAAGAGATGCGC GATCGCTTCGGG CCTCTA CCCGAAGAGGTC TTATGGTTATTCGCA CAB843 976115 - 979372 + | putative transcription-repair coupling factor hemE 979382 - 980383 + | uroporphyrinogen decarboxylase CAB845 980356 - 981732 + | coproporphyrinogen III oxidase CAB846 981729 - 982997 + | protoporphyrinogen oxidase CAB847 985472 - 982968 - | DNA-binding protein TERM 843 985685 - 985664 - H 78 -3.7 -5.40873 | opp_overlap 985664, overlap 985666 AACACAAAAAGAAAA CTCGTACAT GAAA ATGTACAGG CTCTTCTTTAAAAAA CAB848 985885 - 986256 + | putative histone-like protein TERM 844 986279 - 986310 + F 71 -4.6 -4.76874 | gap 1, overlap 986280 CTTGTCTTGGTTTTT AGAGGGTAA-TTATA TTT TATAACTTGCCCTCA TTTTCCTTTTCTCTT TERM 845 986280 - 986309 + F 70 -8.1 -3.43684 | gap 1, overlap 986279 TTGTCTTGGTTTTTA GAGGGTAA-TTATA TTT TATAACTTGCCCTC ATTTTCCTTTTCTCT CAB849 986480 - 987685 + | putative RNA methyltransferase TERM 846 987859 - 987879 + G 76 -4.7 -5.10656 | overlap 987860 CTTTTGCTCAACCCG CTGTAATGC TTG GCATTGCAA TTTTGTTCTTTTACT TERM 847 987860 - 987878 + G 70 -8.2 -3.63953 | overlap 987859 TTTTGCTCAACCCGC TGTAATGC TTG GCATTGCA ATTTTGTTCTTTTAC yajC 987756 - 988109 + | preprotein translocase subunit YajC nqrF 988228 - 989523 + | Na(+)-translocating NADH-quinone reductase subunit F CAB852 991029 - 989566 - | hypothetical protein CAB853 991490 - 991074 - | hypothetical protein TERM 848 991639 - 991623 - H 86 -6.5 -5.10877 | opp_overlap 991625 991637 ATAAGAAACTAAAAA TACCCTG TAA CGGGGTA TCTCAATACATTTAC TERM 849 991682 - 991668 - H 70 -8.6 -2.98356 | opp_overlap 991667 ACCTAAATGGATAGA CTCTTC TTG GAAGAG CGTTTGTACTTATAC TERM 850 991805 - 991786 - H 100 -5 -6.23545 | opp_overlap 991786 CTTAAACAAAAAAAA GGAGAATA TTTC TGTTCTCC TTATAAAAACTCAGT TERM 851 994484 - 994496 + H 78 -7.7 -4.2354 | AGGTTCTATTTCACT CCCTT AAC AAGGG TTCTTTTCACCTTTC TERM 852 994726 - 994742 + H 83 -9.5 -3.97088 | opp_overlap 994725 994724 ATCGACCCTACAACC CCACATT AAA AATGTGG TTTGGTCTTCTCCCC TERM 853 995257 - 995276 + H 72 -9.2 -2.65808 | opp_overlap 995245, overlap 995254 995269 AAAGGAGGTGATCCA GCCCCACC TTCC GGTAGGGC TACCTTGTTACGACT TERM 854 996157 - 996175 + H 79 -11 -2.7814 | overlap 996156 AGTATTAGATGCTGG CTTGGGGT TGA GCCCCAAG ATTTAACATCTAACT TERM 855 996829 - 996812 - H 77 -8.5 -3.85552 | AAATTTAAAAATTAA CGGATTT TTTA AAATCCG AACAAGCATTTTTTT TERM 856 997567 - 997597 + H 71 -7.1 -3.96705 | opp_overlap 997573, overlap 997558 997573 AGGCTTTTTGTCTTG GATAAATATTATC GTCGA GATAATATTTCTC TTTAGCTTTTATAGC CAB855 997772 - 1000195 + | putative cell division FtsK-related protein CAB856 1000200 - 1000988 + | hydrolase CAB857 1000985 - 1001647 + | hypothetical protein CAB858 1002104 - 1001652 - | hypothetical protein CAB859 1003494 - 1002118 - | putative transport-related membrane protein TERM 857 1002737 - 1002747 + g 73 -5.4 -4.63218 | TAGCCTTCCAAGCCG GCAA CTG TTGC TTTTATTCCGAAAGC CAB860 1004248 - 1003604 - | putative lipoprotein TERM 858 1004897 - 1004863 - g 81 -11.6 -2.98387 | overlap 1004858 CTGGAGAAAATAGCA TTACCTTTAAGCAGTT CCA AACTGCTCATAGGCAA CTAATGCATTTCTTA CAB861 1004484 - 1005851 + | hypothetical protein ribH 1006333 - 1005869 - | riboflavin synthase subunit beta ribA 1007611 - 1006346 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein ribD 1008800 - 1007694 - | riboflavin biosynthesis protein RibD TERM 859 1009219 - 1009237 + G 74 -3.8 -5.14626 | opp_overlap 1009220, overlap 1009220 CCAGGTAATTAAACA AGTAGGTG CCT TACCTACA TTTTCTTTTACTCCT TERM 860 1009236 - 1009220 - g 71 -6.6 -4.09321 | opp_overlap 1009219 1009220 CAGGTAATTAAACAA GTAGGT GCCTT ACCTAC ATTTTCTTTTACTCC serS 1008845 - 1010119 + | seryl-tRNA synthetase CAB866 1010191 - 1010934 + | hypothetical protein TERM 861 1011187 - 1011200 + G 70 -8.1 -3.75437 | TTTACATTCTTTCTT GCTGG GACT CCAGC TTTGATAAAATCGTT TERM 862 1012776 - 1012763 - g 71 -6.7 -3.98173 | overlap 1012769 GGAAAGCTAAGCAAA CACGA AGGA TCGTG ACCCAAAACTTGGGA CAB867 1010950 - 1012923 + | putative cation transport related membrane protein CAB868 1014066 - 1012927 - | putative rod shape-determining protein TERM 863 1013098 - 1013079 - G 82 -10.8 -3.56558 | overlap 1013094 TAATATTAATTAGAA CGTGCATA GAAA TATGCACG GTAATCCCTGCGGCT TERM 864 1013543 - 1013532 - G 86 -4.4 -5.36441 | TTCCTAGATAAAAAA TTGC CAAA GCAA CGGGACATAGCACTA TERM 865 1013804 - 1013788 - G 82 -3.7 -5.5112 | CGCAGGAACAAAAAA TAAACCT ATC AGGCTCA ACAGCATAAGGATAT TERM 866 1013889 - 1013878 - G 85 -5.8 -5.20333 | CATGCATAAGAAAAA GGCT ACCC AGCC TAAAGCAAAATGGCG TERM 867 1013904 - 1013918 + g 76 -4.3 -5.09762 | CTAAAGCAAAATGGC GTATC TGCAT GATAC TTTTATTTGTTAGCA TERM 868 1014457 - 1014472 + G 70 -9 -3.10091 | overlap 1014453 GCGAAACTCTACCAT CCCAAG GGTA CTTGGG TATCGTTTTAGGAAT birA 1014102 - 1014674 + | biotin--protein ligase CAB870 1015175 - 1014648 - | hypothetical protein TERM 869 1014697 - 1014685 - G 78 -4.1 -5.22039 | GGTAAATCTAAAAAA CGAAA TAC TCTCG AAGCTACCCATAATG rluB 1015916 - 1015218 - | putative 16S pseudouridine synthase CAB872 1016074 - 1016757 + | phosphoglyceromutase CAB873 1016712 - 1017869 + | putative cysteine desulfurase CAB874 1017866 - 1018687 + | putative NifU-related protein TERM 870 1018758 - 1018771 + F 74 -3.9 -5.14965 | ATGTTAATAACTCTA TAATG ATTT CATTA TTTTTTCCTGAGGAT TERM 871 1019147 - 1019135 - g 74 -4.9 -4.82901 | opp_overlap 1019135 CTCCTCTCATAAAAA TGAAA TGT TTTCA TTACCTCTATTGCAA TERM 872 1019323 - 1019298 - g 70 -7.7 -3.65046 | overlap 1019300 TCTGCATGCGAACAA TATTTAGGGAA AATT TTCCCTAAAGA ACACTTTGCTTTAGC TERM 873 1019321 - 1019300 - g 77 -10.3 -3.40611 | overlap 1019298 TGCATGCGAACAATA TTTAGGGAA AATT TTCCCTAAA GAACACTTTGCTTTA CAB875 1018791 - 1019804 + | type III secretion system protein TERM 874 1020164 - 1020182 + G 76 -6.8 -4.46615 | CATACCTCCTTACGA TCTTTATC TCC GGTAAAGA TTTTCCTTCATCCTG CAB876 1019828 - 1020379 + | hypothetical protein TERM 875 1021278 - 1021266 - g 73 -7.7 -3.90922 | opp_overlap 1021271, overlap 1021271 ACGTGCTGGAAATAA CGAAC GCG GTTCG ATAACAGCTCTTTAT CAB877 1020376 - 1021680 + | type III secretion system ATPase TERM 876 1021929 - 1021916 - g 71 -6.7 -4.09117 | TCTATTTATAAACAA CACGA TATC TCGTG TAATCGCCTACAAGA CAB878 1021673 - 1022047 + | hypothetical protein CAB879 1022053 - 1023435 + | putative UDP-N-acetylhexosamine pyrophosphorylase gpsA 1023432 - 1024436 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase CAB881 1024568 - 1025602 + | putative exported outer membrane protein CAB882 1026765 - 1025599 - | hypothetical protein TERM 877 1026033 - 1026046 + g 71 -5.3 -4.64657 | CATCAGTCAGCGTAG CATTC CCCT GAATG TTTTTAGAAATTTGC CAB883 1029014 - 1026774 - | hypothetical protein TERM 878 1029080 - 1029068 - R 100 -3.5 -6.34616 | overlap 1029040 1029036 TTAAAATAAAAAAAA TATTT CAA AAATA AAAAATAATTATCTT CAB884 1030940 - 1029129 - | phosphoenolpyruvate carboxykinase TERM 879 1029812 - 1029826 + g 72 -10 -2.73159 | overlap 1029811 1029814 AATTCGGATGTGCAG CAGGAG CCC CTCCTG GTTTCCAAGGCTTCC CAB885 1031989 - 1030937 - | putative rod shape-determining protein CAB886 1035539 - 1032042 - | putative helicase TERM 880 1032680 - 1032655 - G 70 -5.5 -4.35461 | opp_overlap 1032654 1032655 1032676, overlap 1032673 1032676 TGAATACGATCAAAA CCTTCTTGTTT CACC AAACGAGAAAG CTCTTTCTTCGCTGA TERM 881 1032951 - 1032963 + g 71 -6.3 -4.18494 | opp_overlap 1032951 GAATAAACTCCACAA CTCTT CCA AAGAG TTTTCAATCGGCGTA TERM 882 1036721 - 1036747 + G 70 -9.5 -2.57996 | overlap 1036720 1036717 AACACCAACAGTGCT TTGCTGAGGCA GAAAA TGCCTTGGCAA GTATTATCGATTTCG tig 1035835 - 1037160 + | trigger factor TERM 883 1037463 - 1037445 - g 71 -6 -4.16016 | TGATTGGCCAAGAAA TTACCGAG CCC CTCGCTAA TACCGTCATAGCACA clpP 1037333 - 1037950 + | ATP-dependent Clp protease proteolytic subunit TERM 884 1039056 - 1039046 - g 85 -6.8 -5.1287 | GCTATAGCGAAAAAA GCCA AGC TGGC GAAAACTGGAGCCAG clpX 1037960 - 1039225 + | ATP-dependent protease ATP-binding subunit TERM 885 1040001 - 1040022 + G 70 -3.1 -4.91873 | gap 1, overlap 1040007 TAAAAGACTGAATCC GCTAGATTTC CCT GAAATTT-GC TTTTTACTTCCTCTA CAB890 1039255 - 1040487 + | putative poly A polymerase engA 1040610 - 1042034 + | GTP-binding protein EngA TERM 886 1042294 - 1042282 - T 75 -9.1 -3.58269 | opp_overlap 1042281 1042280 1042282 GAATCGATCCTTAAA GGCGT AAT ACGCC AATTTTACATTAGTG TERM 887 1042682 - 1042663 - T 75 -7.1 -4.29845 | TAACGTAAGGGAAAA GGCTGGA AGCTAG CCCAGCC CTAAAGCTCTTTTTA secA 1045604 - 1042695 - | preprotein translocase subunit SecA TERM 888 1045713 - 1045700 - R 78 -6.7 -4.64676 | opp_overlap 1045699 1045700 TGATGGTGAATAAAA GGAAC AAAA GTTCC CTCTCTTATATTCTT CAB895 1047115 - 1045790 - | hypothetical protein CAB896 1048080 - 1047181 - | phosphatidylserine decarboxylase TERM 889 1048201 - 1048216 + H 83 -6.2 -5.13722 | GGGGAACCTGATATC CTAACT CTCA AGTTAG TTTTATTTTCATCCA trmE 1048237 - 1049568 + | tRNA modification GTPase TrmE CAB898 1049558 - 1050217 + | putative DNA repair protein CAB899 1050371 - 1051600 + | putative branched-chain amino acid transport protein TERM 890 1053302 - 1053292 - g 75 -5.4 -4.67982 | CCCTACCTAAGAAAA TTCC TCC GGAA CAGGTCCCTGATTTT TERM 891 1054560 - 1054548 - g 70 -7.7 -3.77832 | GCGCAAATTCAACAA CTGGA ATC TCCAG AAGAACAAACAGTCA CAB900 1051635 - 1055255 + | putative DNA helicase-related protein CAB901 1055743 - 1055279 - | putative inner membrane protein TERM 892 1055469 - 1055485 + g 73 -9.5 -3.14261 | opp_overlap 1055467, overlap 1055472 TGTTGTAACCAACTC CAATCTG ATT CAGATTG TTCGGTAGGTTTTTG TERM 893 1055622 - 1055604 - G 72 -9.6 -2.98607 | overlap 1055606 GGGAAAGAAATATGA CACGAAGA AAA TCCTCGTG AAGCTATCGGAGGAT TERM 894 1057011 - 1057025 + G 75 -10 -3.09004 | AAATTATGGATTATT CTGCAG TGC CTGCAG TCATTTTCACCCTCC pdhD 1056005 - 1057393 + | dihydrolipoamide dehydrogenase TERM 895 1057454 - 1057429 - g 86 -9.8 -4.10717 | CAAAAACCCAAACAA GGGAAACGTT TTTCAG AACGTCTCCC TCACTGGCTAAGGCA lipA3 1057390 - 1058322 + | lipoyl synthase CAB904 1058534 - 1059526 + | putative type III export protein CAB905 1059526 - 1060359 + | hypothetical protein TERM 896 1060396 - 1060406 + F 86 -5.4 -5.28481 | GAACAAATAATCAGG GAGA CTT TCTC TTTTTTCCTTGCATA TERM 897 1060782 - 1060768 - g 77 -5 -4.87665 | GCCTATTTAGAAAAA GAAACT CAT AGTCTC CGTAATAAAGTTAAA CAB906 1060525 - 1061181 + | type III secretion system protein CAB907 1061196 - 1062113 + | type III secretion system protein CAB908 1062123 - 1062407 + | putative type III export protein CAB909 1062414 - 1063283 + | putative type III export protein CAB910 1063816 - 1063373 - | putative inner membrane protein TERM 898 1063775 - 1063790 + g 74 -4 -5.16132 | AAACTGAGAGGACGA CTCTTT CGAA GAAGAG TTTTCTTTTGGTGTC TERM 899 1063895 - 1063880 - R 88 -3.4 -5.89827 | AATTATCAAAAAAAA TATTTA AAGA TAAATA AGAAATTTTTAATTA CAB911 1064912 - 1063908 - | hypothetical protein CAB912 1065457 - 1064915 - | putative periplasmic protein TERM 900 1065410 - 1065427 + g 70 -2.7 -5.01732 | opp_overlap 1065400 CAACACCTCCATAAG CAGGAAG GACC TTTTCTG TTTTTTAAAAAAGTT CAB913 1065885 - 1065442 - | putative inner membrane protein gspG 1066265 - 1065888 - | putative general secretion pathway protein G (periplasmic) gspF 1067459 - 1066284 - | general secretion pathway protein F gspE 1068963 - 1067470 - | general secretion pathway protein E TERM 901 1068169 - 1068179 + g 75 -5.4 -4.67904 | opp_overlap 1068153 1068169 CTGTATCACACTATA CAAC GTG GTTG TTTTTCCGCTTCCTG TERM 902 1068355 - 1068327 - G 73 -8.1 -3.81022 | overlap 1068329 1068352 AAATCCTCAGAACAA CACGCTCCCCGTG GAT CACAGGAACCGTA CTCACACGCATGTCA TERM 903 1068353 - 1068329 - G 72 -8.5 -3.48378 | overlap 1068327 1068352 ATCCTCAGAACAACA CGCTCCCCGTG GAT CACAGGAACCG TACTCACACGCATGT gspD 1071214 - 1068953 - | general secretion pathway protein D TERM 904 1069485 - 1069501 + g 86 -4.3 -5.38054 | ATAATACCATATTGC GCACGGT TGT ACTGGGC TTTTTCTTTATCCGC CAB918 1072528 - 1071215 - | hypothetical protein TERM 905 1072033 - 1072050 + g 75 -9.9 -3.34715 | overlap 1072030 TCTCTCTTTCTTTAG GAGAGGT AATC ACCTCTC TATTTACACCCAGTA TERM 906 1072318 - 1072297 - G 71 -7.3 -3.90048 | overlap 1072295 TGCTGCCTAAAAACA CCAGCTCTT GTCT AAGATCTGG CAACTTTTCCCTCAG CAB919 1073719 - 1072649 - | putative peptidase TERM 907 1073221 - 1073236 + g 71 -6.2 -4.24786 | opp_overlap 1073221 CCCAAAATATACGAA GAAGTT GTAC AACTTC TTTCTCTGTTATGCC mutL 1075471 - 1073723 - | DNA mismatch repair protein TERM 908 1074080 - 1074067 - G 80 -2.3 -5.58522 | opp_overlap 1074067, overlap 1074068 GAGATAAAAGAAAAA CCCTC TCTT GAGGC GTCACTTCCAAACAT CAB921 1075699 - 1076382 + | putative regulatory protein TERM 909 1076393 - 1076379 - f 90 -2.8 -6.06723 | overlap 1076380 1076383 CTCCGGAAAAAAAAA TTAACC TAG GGTTAG GAGAACTCCAATATG CAB922 1076406 - 1076795 + | hypothetical protein TERM 910 1077012 - 1076997 - g 71 -7.6 -3.84719 | ACGCTGAAATGCAAA GCGATA CTAA TATCGC TGGAACTCAAGGTAA TERM 911 1077116 - 1077159 + G 77 -9.7 -3.56643 | gap 1, opp_overlap 1077106 1077108 1077123 CAAGAGACGGCATCC GCAGAAGCTGCAGCTGGT GCTAACCAA GCC-GCTGGAGCTTCTGC TTTCCAGGCTGTAAA TERM 912 1077390 - 1077434 + G 73 -8.5 -3.69354 | opp_overlap 1077381 1077398, overlap 1077392 AAATCAGCATGGCCC TAGCAAAAGCCATCGCCTCTC TGG GAGAAGCCACGGCTTCTGCTC TTTCCGATTATCAAA TERM 913 1077392 - 1077432 + G 80 -11.1 -3.4268 | opp_overlap 1077381 1077398, overlap 1077390 ATCAGCATGGCCCTA GCAAAAGCCATCGCCTCTC TGG GAGAAGCCACGGCTTCTGC TCTTTCCGATTATCA TERM 914 1077426 - 1077398 - g 95 -11.7 -4.25283 | opp_overlap 1077392 1077390, overlap 1077381 ATGGCCCTAGCAAAA GCCATCGCCTCTC TGG GAGAAGCCACGGC TTCTGCTCTTTCCGA TERM 915 1077713 - 1077678 - g 75 -10.2 -3.25823 | opp_overlap 1077701 TGGGTCTTATAGGAA CTGCGGCTGCTGGAGC CACA GCTGCTGCCGCCGCTG CAACTGCTGGAGCTA CAB923 1076834 - 1078318 + | putative inner membrane protein TERM 916 1078553 - 1078543 - g 81 -5.4 -5.055 | overlap 1078532 GGAACTTCTAAAAAA GAAG CCT CTTC GCAAACATCAAAAAG CAB924 1078348 - 1079670 + | putative inner membrane protein TERM 917 1079666 - 1079676 + T 78 -5.4 -4.90079 | CTTCTGCAATCTTTA GCTA ATA TAGC TTTTCTTCTTCGGAT TERM 918 1079721 - 1079700 - T 100 -13.1 -4.48987 | opp_overlap 1079700 TTCGGATAAGCAAAA GGGCTCAAT GCAT ATTGAGCCC TTGTTTATGTAAATC TERM 919 1079700 - 1079721 + T 100 -13.1 -4.15698 | opp_overlap 1079700 TTCGGATAAGCAAAA GGGCTCAAT GCAT ATTGAGCCC TTGTTTATGTAAATC CAB925 1080648 - 1079746 - | exported membrane protein TERM 920 1079936 - 1079914 - G 88 -11.4 -3.50488 | overlap 1079915 ACAAAAAGACAGGAA CGTTGAGGAA TAT TTCCTCAACA ACTTAGCGTACAAAT TERM 921 1079935 - 1079915 - G 83 -12.7 -2.68666 | overlap 1079914 CAAAAAGACAGGAAC GTTGAGGAA TAT TTCCTCAAC AACTTAGCGTACAAA TERM 922 1080577 - 1080563 - G 73 -5.6 -4.55295 | CCTGTGACAAATAAA GGAGCC GAA GCCTCC ATCGCTAATTTGCTA TERM 923 1080664 - 1080642 - G 83 -3.5 -5.69023 | AAAATACTAAAAAAA TAGACATGA AGAAG TCATTTCTA GAATCGAAAACATCC TERM 924 1082122 - 1082111 - g 79 -5.8 -4.84761 | ACACGTCCAGAAAAA GCCA CAAT TGGC AGTGATGAACTCTGG thrS 1080854 - 1082761 + | threonyl-tRNA synthetase TERM 925 1082959 - 1082975 + G 83 -12.3 -2.72344 | TGATCCCGATTGTTA CGACAGC TTA GCTGTCG TACTTCAGGGTGAAA CAB927 1082792 - 1083559 + | putative chromosome partitioning protein CAB928 1083564 - 1084316 + | hypothetical protein TERM 926 1084469 - 1084483 + G 70 -2.9 -5.06451 | TCTAATGGCCAACAG GAAAT AGCCA ATTTC TTTTTTGAAATGCTC TERM 927 1084821 - 1084801 - g 81 -2.5 -5.67063 | overlap 1084802 1084820 TGTAGGAGAAAAAAA CCTCCTAGA AAT TCAAGAAGA TATCGTATCATTGAA CAB929 1084319 - 1084873 + | hypothetical protein trpS 1084885 - 1085922 + | tryptophanyl-tRNA synthetase TERM 928 1086029 - 1086010 - g 82 -11.4 -3.11732 | overlap 1086001 GCTAAACTCACGCAA GGCGTACG TAAT CGCACGCC ATCTCAGGTGTTGTT TERM 929 1086793 - 1086756 - g 93 -13.7 -3.0263 | AGCATTCTTCCAAGA TCGTCCTATAGAACAAG ATCG CTTATTCCATAGAACGA CTCACGATATCGAAA TERM 930 1087754 - 1087737 - g 70 -2.7 -5.055 | gap 1, overlap 1087738 1087741 GCAAGGGGGAAAAAA GGCAGTGC AAG ACACT-CC GCAAAAACCTTTATC uvrB 1085938 - 1087908 + | excinuclease ABC subunit B TERM 931 1088242 - 1088227 - g 73 -7.6 -3.98282 | overlap 1088223 TCCACAGGAATTAAA GAAGCT TTAG AGCTTC GCGATCAAGATACCT eno 1088083 - 1089357 + | phosphopyruvate hydratase TERM 932 1089363 - 1089401 + F 95 -10.5 -4.69622 | gap 1, opp_overlap 1089357, overlap 1089357 1089366 1089369 TGGAGAATAGCATCG GATCGATCGCTTTCTTGT GATT ACTAGAAAGCGATTG-TC TTTTTCAGCTTCTCT TERM 933 1089366 - 1089399 + F 100 -13.3 -3.95535 | opp_overlap 1089357, overlap 1089357 1089363 1089369 AGAATAGCATCGGAT CGATCGCTTTCTTGT GATT ACTAGAAAGCGATTG TCTTTTTCAGCTTCT TERM 934 1089369 - 1089396 + F 91 -11.4 -4.08349 | opp_overlap 1089357, overlap 1089357 1089366 1089363 ATAGCATCGGATCGA TCGCTTTCTTGT GATT ACTAGAAAGCGA TTGTCTTTTTCAGCT TERM 935 1090768 - 1090758 - g 78 -2.6 -5.40072 | CCTGGCTGAAAAAAA TTAT GAA ATAA AAGAAAGTGCTCAAA CAB933 1089613 - 1091520 + | regulatory protein TERM 936 1093110 - 1093090 - g 88 -9.1 -4.57073 | opp_overlap 1093090 TAGCCTTTTTAAAAA GACAAGAAA CAT TTTCTCGTC TTATTTCGCCCTCCG CAB934 1091517 - 1093337 + | hypothetical protein TERM 937 1093718 - 1093729 + F 71 -4.4 -4.77216 | AACTTCTTGCCGATA CCTT GAGG AAGG TTTTTGACTCTTGTT TERM 938 1094530 - 1094498 - g 73 -7.8 -3.86995 | gap 1, opp_overlap 1094497 1094498 GGAAACTTACAAGAA TCATCGGCACGCGAG AAGT CTC-CGTACCTATGA ATTTGTCAGGCTGCA CAB935 1093897 - 1096788 + | hypothetical protein sdhB 1097576 - 1096785 - | succinate dehydrogenase iron-sulfur subunit TERM 939 1096922 - 1096943 + g 73 -8.7 -3.62495 | opp_overlap 1096923, overlap 1096923 GACACACGCGAACAC AGTTGTGGG CTTG CCCACAACC TTCTATACCTTTTTT TERM 940 1096942 - 1096923 - G 83 -12.2 -3.10053 | opp_overlap 1096922 1096923 ACACACGCGAACACA GTTGTGGG CTTG CCCACAAC CTTCTATACCTTTTT TERM 941 1096923 - 1096942 + g 81 -12.2 -2.7587 | opp_overlap 1096923, overlap 1096922 ACACACGCGAACACA GTTGTGGG CTTG CCCACAAC CTTCTATACCTTTTT TERM 942 1096992 - 1097008 + g 72 -9.5 -3.01924 | GCGCTTCTTAGATTG CTTATCC CCA GGATAAG TGTTAAACAAACGTG sdhA 1099474 - 1097591 - | succinate dehydrogenase flavoprotein subunit TERM 943 1098971 - 1098943 - G 70 -8.9 -3.19178 | opp_overlap 1098949, overlap 1098941 1098946 1098951 ATAAATTCATTAACA CAATACCACAGGC TCT GCCTGCACTATTG GTAATTAATCTTATA sdhC 1100375 - 1099479 - | putative succinate dehydrogenase subunit CAB939 1101267 - 1100467 - | hypothetical protein TERM 944 1101410 - 1101387 - R 100 -9.7 -5.76633 | GTAGAGATAAAAAAA GGGTGTATT GGCACT AATACACCC CAAACAGATTGTGCT dsbD 1103575 - 1101437 - | putative thiol:disulfide interchange protein TERM 945 1102805 - 1102815 + g 72 -3.2 -5.1167 | CTGATTTTTCTGAAC TCCT GAA AGGG TTTTTATCTTCAGTT TERM 946 1104141 - 1104124 - g 75 -9.9 -3.36515 | opp_overlap 1104114 1104121, overlap 1104122 TGTTATGCCGAAATA TCGTGCA CTTA TGCACGA AAATAACTTTATCCC CAB941 1103747 - 1104445 + | putative transport protein TolQ exbD 1104442 - 1104849 + | biopolymer transport protein ExbD CAB943 1104852 - 1105610 + | putative exported TonB protein tolB 1105630 - 1106913 + | translocation protein TolB CAB945 1106924 - 1107499 + | putative peptidoglycan-associated protein (periplasmic) CAB946 1107489 - 1108106 + | putative periplasmic hydrolase TERM 947 1108537 - 1108552 + G 79 -4.8 -5.00884 | opp_overlap 1108537 1108535 TCTTTGTCGAAAATA TAAAAG CTTT CTTTTA TTTTTTGAACAAGAT CAB947 1108205 - 1108603 + | hypothetical protein CAB948 1109190 - 1108600 - | putative alkyl hydroperoxide reductase groEL 1111057 - 1109417 - | chaperonin GroEL TERM 948 1109816 - 1109782 - G 80 -10.7 -3.31144 | gap 1, overlap 1109783 CTGGGATTTTTACAA CGGATGCGGCAC-GCG CTAA CGCTGTGCCACCTCCA GGAAGGCATCCTTCT TERM 949 1109815 - 1109783 - G 81 -12 -2.58544 | gap 1, overlap 1109782 TGGGATTTTTACAAC GGATGCGGCAC-GCG CTAA CGCTGTGCCACCTCC AGGAAGGCATCCTTC TERM 950 1110659 - 1110673 + g 77 -8.6 -3.87373 | ATCTGCCTGAATTGC GAGCTT AGA AAGCTC TTTATCCAGCATGTC TERM 951 1110963 - 1110949 - G 73 -8.6 -3.78934 | overlap 1110954 CTTTTTTGATAACAA CACAAG ACC CTTGTG GACCTAAAGTTGTAA CAB951 1112402 - 1111161 - | hypothetical protein CAB952 1112637 - 1113257 + | putative deoxyribonucleotide triphosphate pyrophosphatase CAB953 1113473 - 1113240 - | hypothetical protein ung 1114159 - 1113470 - | uracil-DNA glycosylase TERM 952 1114222 - 1114234 + H 100 -7.7 -5.47218 | TAGATTATTTTAGCT TCAGG GAT CCTGA TTTTTTTCAGTCAGA uvrD 1114273 - 1116186 + | DNA helicase II, UvrD rpoN 1116189 - 1117460 + | RNA polymerase factor sigma-54 CAB957 1118279 - 1117482 - | hypothetical protein TERM 953 1119874 - 1119894 + Gr 79 -10.5 -3.14211 | overlap 1119876 GATTAATTACTTATA TGCGTACAG ATT CTGTACGTA TTGATCCCGAGGCAT TERM 954 1119876 - 1119892 + Gr 80 -10.9 -3.13403 | overlap 1119874 TTAATTACTTATATG CGTACAG ATT CTGTACG TATTGATCCCGAGGC TERM 955 1120908 - 1120896 - gR 80 -9.1 -3.88498 | opp_overlap 1120895 1120896 GGTGGAGATATGAAA GTCCG CCA CGGAC GTTTTGGCACATTTT TERM 956 1120896 - 1120908 + Gr 70 -9.1 -3.07685 | opp_overlap 1120896, overlap 1120895 GGTGGAGATATGAAA GTCCG CCA CGGAC GTTTTGGCACATTTT TERM 957 1121007 - 1120995 - gR 72 -4.1 -4.99861 | opp_overlap 1121004, overlap 1121003 1121004 GAGGAAGTAGAAAAA GAAGA AAC CCTTC CCTGTCCTGCTGTGG TERM 958 1121213 - 1121193 - gR 78 -2.5 -5.49234 | ACAGGGAAGAAAAAA GCTACTACA AAA TCCAGCAGC AAAACGACGAAAACA CAB959 1122511 - 1121492 - | putative dihydrouridine synthase topA 1118928 - 1121546 + | fused DNA topoisomerase I/SWI domain-containing protein TERM 959 1122455 - 1122443 - GT 71 -4.8 -4.59069 | overlap 1122436 AGGATAATCAGAAAA GCCT GCAAG AGGC GCGTAAACCACAGGA CAB960 1122786 - 1122490 - | inner membrane protein CAB961 1122884 - 1124281 + | putative inner membrane protein CAB962 1124278 - 1124862 + | putative lipoprotein TERM 960 1126008 - 1125993 - g 71 -6.8 -4.07885 | GAGTTGCTTGTAAAA GGCGAA TATT TCCGCC CTGGAGATCGGCACC CAB963 1124853 - 1126130 + | hypothetical protein TERM 961 1126522 - 1126545 + G 71 -7.4 -3.86935 | opp_overlap 1126522 1126525, overlap 1126519 TTTTGATGAGGATAA CTACCGCC TGGGTTAT GGCGGTGG TTGTTATGATCGTTG CAB964 1126133 - 1126675 + | formyltetrahydrofolate cycloligase recA 1127088 - 1128137 + | recombinase A CAB966 1128915 - 1128190 - | hypothetical protein TERM 962 1128477 - 1128494 + g 73 -7.7 -3.87149 | ATCCAGAAATTTTTG TCTCTGC AACT GCAGGGA TTTGGCTTTCATAAG CAB967 1129666 - 1128938 - | hypothetical protein folA 1130126 - 1129638 - | dihydrofolate reductase TERM 963 1129849 - 1129821 - GR 73 -2.4 -5.3167 | overlap 1129816 1129823 1129824 TAAAAATAAAGAAAA CAGTTCTCCTCC GCCAA GAAGAAAAACAG AAGAAAGTTGTTCTA folKP 1131462 - 1130119 - | folate synthesis bifunctional protein TERM 964 1130849 - 1130833 - G 71 -6.6 -4.00042 | CCCTTGAGCAAATAA TTGCTC TGCAT GAGCAA CAGCTTTAGAAGGAT sigA 1133584 - 1131869 - | RNA polymerase sigma factor TERM 965 1133417 - 1133407 - G 70 -5.4 -4.4078 | opp_overlap 1133407, overlap 1133410 1133411 TTCCCGTAAGGAAAA TCAG CAC CTGA TCGATTTGTTCAGGC CAB972 1134900 - 1133695 - | putative inner membrane protein TERM 966 1135335 - 1135319 - g 73 -2.3 -5.19212 | overlap 1135328 ACGATGATGAAAAAA TTTGAAG CAG CTTTAAA AGCTGGTGATCAGAC rpsT 1135184 - 1135480 + | 30S ribosomal protein S20 TERM 967 1136204 - 1136218 + G 77 -6.4 -4.54253 | TTTGGTCGATTTAGT CACGGA AGT TCTGTG TTTGTTTGCTCGTTT CAB974 1135500 - 1136333 + | hypothetical protein TERM 968 1136360 - 1136381 + T 100 -13.1 -5.70829 | opp_overlap 1136356 AAGGAAGACGATCTA CCCCATAAG TATA CTTATGGGG TTTTTTTATGATCTT recD 1137857 - 1136343 - | exodeoxyribonuclease V alpha chain CAB976 1139716 - 1137872 - | hypothetical protein TERM 969 1138856 - 1138840 - G 90 -7.3 -5.31855 | GAGGAACAACAAAAA GATGCTC TAC AAGCATC GAAAACAATTCCTCT TERM 970 1139385 - 1139373 - G 78 -2.7 -5.36441 | TTCTCAGAGAAAAAA GCATT AAG AATAC GCCCTCCTATCACCT CAB977 1139912 - 1140625 + | putative transcriptional regulator CAB978 1140685 - 1141299 + | putative glucosamine-1-phosphate N-acetyltransferase TERM 971 1141454 - 1141429 - g 75 -10.5 -3.21395 | overlap 1141427 AGCCCCTGTAGAATA TGCGTTAACCA GCGG TGGTAAACGCA TTCGCCCTATGTTAG ispA 1141316 - 1142197 + | geranylgeranyl pyrophosphate synthase CAB980 1142556 - 1142302 - | hypothetical protein CAB981 1144231 - 1142639 - | hypothetical protein TERM 972 1142749 - 1142766 + g 74 -4.1 -5.07941 | ACCTGACGACCTCTT TCACCAT GTCT ATGGCGA TTTTTCTATAATTTT TERM 973 1143106 - 1143124 + g 73 -7.4 -4.13648 | opp_overlap 1143107, overlap 1143107 ATCCGAATTCTAGAC ACTCCAAG CCT CTTGGAGA TTTATGTCTACGATT TERM 974 1143123 - 1143107 - G 77 -10.9 -2.91681 | opp_overlap 1143106 1143107 TCCGAATTCTAGACA CTCCAAG CCT CTTGGAG ATTTATGTCTACGAT TERM 975 1143107 - 1143123 + g 78 -10.9 -3.07466 | opp_overlap 1143107, overlap 1143106 TCCGAATTCTAGACA CTCCAAG CCT CTTGGAG ATTTATGTCTACGAT