TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.601017 %AT, 1029564 nt, 8252 terms. Intergenic: 0.656555 %AT, H2T: 138977 nt, 991 terms; T2T: 26232 nt, 440 terms; H2H: 48598 nt, 536 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|29839769|ref|NC_003361.3| Chlamydophila caviae GPIC, complete genome (length 1173390) TERM 1 126 - 136 + G 73 -6.8 -4.15044 | ATCCGAGATTTGGTG GCTG AAA CAGC TTTATTACCCCAAGA hemB 57 - 1052 + | delta-aminolevulinic acid dehydratase TERM 2 1053 - 1066 + T 74 -5.3 -4.66814 | overlap 1037 TCTTCGAAATTCTAG GTTCT TCGA AGAAC TTTATTCTTTATCTT nqrA 2480 - 1068 - | Na(+)-translocating NADH-quinone reductase subunit A CCA00003 2936 - 2502 - | hypothetical protein TERM 3 2773 - 2785 + g 79 -3.4 -5.52096 | TCTTGAGAACGCTTA TCCA ATTCC TGGA TTTTTTCTTGGGTTT TERM 4 4245 - 4224 - g 82 -8.8 -4.2461 | opp_overlap 4224 ATGTTGATCAAGAAA CATTCTCC AGTTTG GGAGAATG TTTTTATGAAGATCT TERM 5 4224 - 4245 + G 90 -8.8 -4.84761 | opp_overlap 4224 ATGTTGATCAAGAAA CATTCTCC AGTTTG GGAGAATG TTTTTATGAAGATCT TERM 6 4357 - 4339 - g 76 -2.4 -5.44119 | CTTATCGTAAAAAAA TCGAGAAA AAA CTTCTTGA ATGTGCTGAACATCC TERM 7 4586 - 4606 + G 71 -7.6 -3.90922 | opp_overlap 4590 4592 AGCTGTTCGTAATAT GATAGAGG GGGCG CCTCTGTC TTATTTAAAAGAGAT greA 3048 - 5201 + | fused transcript cleavage factor/uncharacterized domain-containing protein TERM 8 5499 - 5517 + G 73 -2.3 -5.20328 | overlap 5501 ATATGGTGGTTTTTC TAGCGTC CGTAA GGCGCAA TTTCTTTTTTTAGAA TERM 9 5807 - 5818 + G 72 -4.4 -4.7373 | opp_overlap 5798 5807 ATTATAGCTCAGAAA GCAA AAGT TTGC TTTTTGATGAGATGC TERM 10 6370 - 6381 + G 73 -2.2 -5.32944 | TTTGACTTTATCTTG TCTC AGAA GGGA TTTTTTGGTTATCCC CCA00005 5353 - 6543 + | aromatic amino acid aminotransferase TERM 11 6614 - 6638 + F 100 -9.4 -5.67711 | gap 1, opp_overlap 6613 6611 6616, overlap 6616 TTTTACTATGAATAT CA-GCGCAGAT ATCC ATCTGCGCCTG TTTTTGTTTTGTTTC TERM 12 6616 - 6635 + F 89 -12.2 -3.21407 | opp_overlap 6613 6611 6616, overlap 6614 TTACTATGAATATCA GCGCAGAT ATCC ATCTGCGC CTGTTTTTGTTTTGT TERM 13 6635 - 6616 - f 84 -12.2 -2.78495 | opp_overlap 6616 6614, overlap 6613 6611 TTACTATGAATATCA GCGCAGAT ATCC ATCTGCGC CTGTTTTTGTTTTGT TERM 14 6924 - 6939 + G 85 -7.6 -4.84761 | GTGTTATTTTGTGTT GGTCTT TACC AAGACC TTTTTATGAAAATAT TERM 15 7269 - 7249 - g 88 -2.5 -5.9667 | opp_overlap 7248 AAAAATACAAAAAAA TTCTCCG GTGTTGT CGGGGAA GGTTCTTGTTGGTCT TERM 16 7764 - 7751 - g 71 -6.7 -4.02581 | TCTTATAAAATAGAA GCCAA GTCG TTGGC CGAAGACTTAACAAA CCA00006 6839 - 7861 + | hypothetical protein recB 10958 - 7821 - | exodeoxyribonuclease V, beta subunit TERM 17 7999 - 8013 + g 87 -8.6 -4.58236 | opp_overlap 7996 7999 TGGGTATAAATAGCA CCTTGA TAA TCAAGG TTTTGCTCTTTTATA TERM 18 9154 - 9164 + g 70 -3.2 -4.84146 | overlap 9139 GAAAAGAAATAGGTC GAGT AGA GCTC TTTCTTTTCTATAGT recC 14010 - 10945 - | exodeoxyribonuclease V, gamma subunit TERM 19 11194 - 11208 + gH 71 -5 -4.58395 | TTGATATACCTGTAA TACCTG ATT TAGGTA TTTTTCAGGACTAGA TERM 20 11700 - 11746 + gH 83 -7.4 -4.65584 | opp_overlap 11700 11701 11718, overlap 11704 11718 11738 CTGACGTGTTTGAAA GCTGTTTTTCCCAAAAAAGCAG AAC CTGCTTTTTTGTTGGGAAAAGC TTTTCTCTAGTTTCT TERM 21 11704 - 11744 + gH 72 -9.4 -2.6155 | gap 2, opp_overlap 11700 11701 11718, overlap 11700 11718 11738 CGTGTTTGAAAGCTG TTTTTCC--CAAAAAAGCAG AAC CTGCTTTTTTGTTGGGAAAA GCTTTTCTCTAGTTT TERM 22 11728 - 11718 - GH 84 -6.8 -5.00616 | opp_overlap 11704 11700 11718, overlap 11700 11701 GTTTTTCCCAAAAAA GCAG AAC CTGC TTTTTTGTTGGGAAA TERM 23 11718 - 11728 + gH 93 -6.8 -5.4505 | opp_overlap 11700 11701 11718, overlap 11704 11700 GTTTTTCCCAAAAAA GCAG AAC CTGC TTTTTTGTTGGGAAA TERM 24 13251 - 13227 - GH 91 -12.9 -2.95298 | overlap 13229 GGGATTTATGAGAGA GATTGGCAAGC AAG GCTTGCCTATC AGCTAAAACATAATG TERM 25 13249 - 13229 - GH 77 -9.7 -3.02947 | overlap 13227 GATTTATGAGAGAGA TTGGCAAGC AAG GCTTGCCTA TCAGCTAAAACATAA TERM 26 14393 - 14379 - gR 73 -5.6 -4.56597 | opp_overlap 14386, overlap 14380 TTGGTCCTGCAAAAA TGGGGA TTC TCCCCG AGATGTTGCCTTTAG TERM 27 14392 - 14380 - gR 79 -9.1 -3.33744 | opp_overlap 14386, overlap 14379 TGGTCCTGCAAAAAT GGGGA TTC TCCCC GAGATGTTGCCTTTA TERM 28 14636 - 14625 - gR 71 -3 -5.09225 | ACCGTAGTCAAAAAA TTAC TTAC GTAA GCTTTAAAGATCTTT TERM 29 14667 - 14637 - gR 71 -8.5 -3.09208 | opp_overlap 14645, overlap 14645 14666 AAATTACTTACGTAA GCTTTAAAGATCT TTGGG AGATCTTTAAAGA TACGCGTTACGTACA TERM 30 15740 - 15684 - gR 77 -5.3 -4.85599 | opp_overlap 15684, overlap 15686 15688 15691 CTTACCGGAGAAAAA TATATGATTTATCCCTGAGCCAAGC AGAAGAG GCTTAGCTCAAGGAAAAATTAGAAA TTTTAATGAGAGCAG TERM 31 15738 - 15686 - gR 76 -7.9 -4.05067 | opp_overlap 15684, overlap 15684 15688 15691 TACCGGAGAAAAATA TATGATTTATCCCTGAGCCAAGC AGAAGAG GCTTAGCTCAAGGAAAAATTAGA AATTTTAATGAGAGC TERM 32 15736 - 15688 - gR 86 -10.5 -3.61001 | opp_overlap 15684, overlap 15686 15684 15691 CCGGAGAAAAATATA TGATTTATCCCTGAGCCAAGC AGAAGAG GCTTAGCTCAAGGAAAAATTA GAAATTTTAATGAGA TERM 33 15733 - 15691 - gR 84 -12.2 -2.91239 | opp_overlap 15684, overlap 15688 15686 15684 GAGAAAAATATATGA TTTATCCCTGAGCCAAGC AGAAGAG GCTTAGCTCAAGGAAAAA TTAGAAATTTTAATG CCA00009 14009 - 15721 + | efflux protein, putative CCA00010 16738 - 15743 - | hypothetical protein TERM 34 16169 - 16155 - G 73 -7.2 -4.10453 | TAAACTTCTTTAAAA CCTTTT TCT AAAAGG AGAGAAGAGTACAGC TERM 35 16444 - 16456 + g 70 -7.7 -3.63895 | opp_overlap 16444 CTACGTCGCAACCAA GAGCT ACA AGCTC TTTACGATACTTCAC rpsD 16965 - 17594 + | 30S ribosomal protein S4 TERM 36 17645 - 17616 - T 80 -9.3 -3.63744 | opp_overlap 17619, overlap 17614 17618 17619 TTTTCTTCCAAAAGA GAGGCGCCAACTA AGCC TAGTTGGCGCTTT TAATTTCTTCGCTCT TERM 37 17643 - 17618 - T 90 -11.9 -3.39908 | opp_overlap 17619, overlap 17616 17614 17619 TTCTTCCAAAAGAGA GGCGCCAACTA AGCC TAGTTGGCGCT TTTAATTTCTTCGCT TERM 38 17619 - 17642 + T 100 -15.4 -4.67942 | opp_overlap 17619 17618 17616 17614 TCTTCCAAAAGAGAG GCGCCAACTA AGCC TAGTTGGCGC TTTTAATTTCTTCGC TERM 39 17642 - 17619 - T 100 -15.4 -2.63623 | opp_overlap 17619, overlap 17618 17616 17614 TCTTCCAAAAGAGAG GCGCCAACTA AGCC TAGTTGGCGC TTTTAATTTCTTCGC nfo 18528 - 17659 - | endonuclease IV TERM 40 18714 - 18733 + G 70 -3.4 -4.90917 | GCAGCCTATTTTGGA GCCGATTC TTTA GTAGCGGC TTTTTGGTTAGCTTT TERM 41 18784 - 18798 + G 72 -10 -2.71693 | overlap 18780 GAAAAATCCTTGGAG GGCCTA TTT TAGGCC TGGCTTTCATTCCTC TERM 42 19277 - 19291 + G 73 -8.6 -3.6869 | TAGCATAAAAGCTTT GATAGC CCC GCTATC TTTAGGATTGCTCTC TERM 43 20064 - 20080 + G 85 -5.7 -5.24129 | opp_overlap 20075, overlap 20075 20076 20078 TCTCTAGCGTCTTTT GTAGCGC AAA GCGCCGC TTTTTTCTCAGAAAG CCA00013 18594 - 20237 + | hypothetical protein CCA00014 20346 - 21614 + | hypothetical protein TERM 44 21672 - 21641 - f 83 -7.4 -4.66264 | opp_overlap 21643, overlap 21631 21643 TAAAATCTTTAAAAA GAGCTCACATCT AATTAAAA AGATGTGAGCTT TTTTTTTATGTTTTA TERM 45 21670 - 21643 - f 87 -10 -3.9318 | opp_overlap 21643, overlap 21641 AAATCTTTAAAAAGA GCTCACATCT AATTAAAA AGATGTGAGC TTTTTTTTTATGTTT TERM 46 21643 - 21670 + F 100 -10 -6.38655 | opp_overlap 21643 21641 AAATCTTTAAAAAGA GCTCACATCT AATTAAAA AGATGTGAGC TTTTTTTTTATGTTT TERM 47 21861 - 21840 - g 70 -8.7 -3.42621 | AAGCTCAATCGATAA CCGGAATTG CAGG CAAGTCCGG GTCATCGCAGCCTTC TERM 48 22033 - 22023 - g 71 -6.8 -4.13728 | CAGAGAGTGCGAAAA CTGC GCT GCAG AGTGCGACTACTTAT TERM 49 23426 - 23411 - g 76 -7.6 -4.26832 | overlap 23417 GAAGAAGAAATCAAA CAGAAG CTCA CTTCTG AGGTTACGAAAGCTC CCA00015 21725 - 23635 + | hypothetical protein TERM 50 23667 - 23702 + T 86 -12.7 -2.95448 | opp_overlap 23672, overlap 23672 GGATTTACTGTCAAA AAAAAGCCCGCTTTG CATTTT CAAGGCGGGCTTTTC TATGGTTCAATTTAG TERM 51 23672 - 23697 + T 100 -12.6 -4.614 | opp_overlap 23672, overlap 23667 TACTGTCAAAAAAAA GCCCGCTTTG CATTTT CAAGGCGGGC TTTTCTATGGTTCAA TERM 52 23697 - 23672 - T 100 -10.4 -5.76949 | opp_overlap 23667 23672 TACTGTCAAAAAAAA GCCCGCTTTG CATTTT CAAGGCGGGC TTTTCTATGGTTCAA TERM 53 23809 - 23786 - T 100 -12.4 -3.93782 | opp_overlap 23787, overlap 23787 GGATGGAATAGGAAA GCGGGGAACC AAGA GGTTCCCCGT TTTAATTAGGTTAAT TERM 54 23787 - 23808 + T 100 -15.9 -4.45664 | opp_overlap 23787 23786 GATGGAATAGGAAAG CGGGGAACC AAGA GGTTCCCCG TTTTAATTAGGTTAA TERM 55 23808 - 23787 - T 100 -15.9 -2.95787 | opp_overlap 23787, overlap 23786 GATGGAATAGGAAAG CGGGGAACC AAGA GGTTCCCCG TTTTAATTAGGTTAA CCA00016 26432 - 23820 - | hypothetical protein TERM 56 25602 - 25586 - G 75 -10.1 -3.14132 | CGTGCTCTTTATTAA CGGCCTC TGT AAGGCCG TTAAAGGTAGCCTGA TERM 57 26462 - 26478 + H 83 -2.3 -5.84432 | overlap 26463 AATTTTTTATTTTAT TTTCTTA TTT TAAGAAC TTTTTTTCTATTCTG CCA00017 26634 - 29150 + | hypothetical protein CCA00018 29189 - 29419 + | hypothetical protein CCA00019 30138 - 29416 - | ABC transporter, ATP-binding protein TERM 58 29915 - 29927 + g 93 -5.5 -5.52986 | ATACCTAATCGCGCT CGGTG GTC CATCG TTTTTTTAGTAACAT CCA00020 30629 - 30144 - | hypothetical protein kdsA 31435 - 30626 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 59 30986 - 30937 - G 76 -8.9 -3.63805 | opp_overlap 30942, overlap 30940 30942 30979 AGCGCATATCTGAAA CAAGATTATTGTAACCGAAAGAG CAGC CTCTTTCTGTTAAAATAATTTTA TTATTTCCGGTAGAG TERM 60 30983 - 30940 - G 77 -8.4 -3.95378 | opp_overlap 30942, overlap 30937 30942 30979 GCATATCTGAAACAA GATTATTGTAACCGAAAGAG CAGC CTCTTTCTGTTAAAATAATT TTATTATTTCCGGTA TERM 61 30942 - 30981 + g 93 -11 -5.00196 | opp_overlap 30940 30937 30942 30979 ATATCTGAAACAAGA TTATTGTAACCGAAAGAG CAGC CTCTTTCTGTTAAAATAA TTTTATTATTTCCGG TERM 62 30981 - 30942 - G 82 -11 -3.56347 | opp_overlap 30942, overlap 30940 30937 30979 ATATCTGAAACAAGA TTATTGTAACCGAAAGAG CAGC CTCTTTCTGTTAAAATAA TTTTATTATTTCCGG TERM 63 31613 - 31644 + r 70 -8 -3.20348 | TGAATTATCCTTATG CCTGGGCTGAGG TGACAAGC CCTTAGCCAAGG TTAAATATTCCTCCA TERM 64 31778 - 31816 + r 88 -13.2 -3.06815 | opp_overlap 31766, overlap 31766 ATACAAGCAGGTTGC TTCTTCTTTGCCTGCGGA GGC TCCGCAGGCTAAACAGAA TATATTGGAGAGGAT CCA00022 32111 - 31875 - | hypothetical protein TERM 65 33151 - 33168 + r 82 -8.5 -3.91084 | opp_overlap 33150 TAACTAAGAACTTAT CTAATCG ATCG CGATTAG TTTCATTAACAATAA TERM 66 33260 - 33247 - R 80 -6.7 -4.67651 | ACATTTTAAAATAAA GAACC TTAT GGTTC TAGAGAAAGCTATTG TERM 67 33283 - 33269 - R 73 -7.2 -4.03413 | opp_overlap 33269 ATGGTTCTAGAGAAA GCTATT GAA AATAGC TTTAATAAGTCCTTA TERM 68 33269 - 33283 + r 70 -7.2 -3.7791 | opp_overlap 33269 ATGGTTCTAGAGAAA GCTATT GAA AATAGC TTTAATAAGTCCTTA TERM 69 33289 - 33310 + r 93 -10.3 -3.98683 | opp_overlap 33292, overlap 33292 TGAAAATAGCTTTAA TAAGTCCTT AGTT AAGGACTTA TTTCATTAATCTAGT TERM 70 33307 - 33292 - R 71 -7.6 -3.65603 | opp_overlap 33289 33292 AAATAGCTTTAATAA GTCCTT AGTT AAGGAC TTATTTCATTAATCT TERM 71 33292 - 33307 + r 78 -7.6 -4.11039 | opp_overlap 33292, overlap 33289 AAATAGCTTTAATAA GTCCTT AGTT AAGGAC TTATTTCATTAATCT CCA00024 33753 - 33445 - | hypothetical protein CCA00025 34048 - 33755 - | hypothetical protein CCA00026 35600 - 34161 - | DNA topoisomerase IV subunit A CCA00027 37412 - 35604 - | DNA topoisomerase IV subunit B TERM 72 36029 - 36045 + g 74 -5.1 -4.75967 | opp_overlap 36031, overlap 36031 GGATAATTTTATTAT AACGCAA GTG TTGCGTA TTGTTTTTTGTAATT TERM 73 36031 - 36043 + g 73 -7.7 -3.96386 | opp_overlap 36031, overlap 36029 ATAATTTTATTATAA CGCAA GTG TTGCG TATTGTTTTTTGTAA TERM 74 36270 - 36235 - G 72 -8.4 -3.50488 | overlap 36231 36229 ACAAAAATAGACGAA GCCTCACCATAAAGAG AGCG CTCGTTATAGTGAAAC TTACAATCACGAAGT TERM 75 37037 - 37066 + g 72 -9.5 -3.06515 | gap 1, opp_overlap 37037, overlap 37036 TGCGTACAGAACGCA CTGTAAATGTCTCT GAA AGGG-CATTTACAG CTTTTAACCCTACAC TERM 76 37402 - 37413 + g 75 -3 -5.21506 | ACACTAGCTTCAGTA TATG TTGC CATA TTTTTCTATTCTTCT TERM 77 37517 - 37493 - H 76 -10.1 -2.8304 | opp_overlap 37494, overlap 37490 37486 TAAACAACTTAATGA TTACTCATAGC AAT GCTATGAGTAT TTCTCAACAACAGCT TERM 78 37494 - 37516 + H 100 -13.6 -3.85698 | opp_overlap 37493 37490 37486 AAACAACTTAATGAT TACTCATAGC AAT GCTATGAGTA TTTCTCAACAACAGC TERM 79 37866 - 37854 - H 72 -4.9 -4.64992 | opp_overlap 37854 TTTAAAAAAGATAAA TAGAT GGC ATCTA ATTTTGTCTTGGGCT hemA 37967 - 38983 + | glutamyl-tRNA reductase TERM 80 39033 - 39052 + F 73 -7.2 -4.04474 | AAAATACTCTAGGCT TTCATCGT CAAT GCGATGAA TTTGTATGCAAGTGT CCA00029 39330 - 39734 + | hypothetical protein TERM 81 40173 - 40161 - g 87 -6.3 -5.28414 | GAAGAAAGAGAAAAA GTCTT CAC AAGAC AGTGGAAAAAAATCT TERM 82 40271 - 40243 - g 77 -8.2 -4.30253 | overlap 40240 40244 GATAAAGACAAAGAA CTTGCTGAAGCT TTCTT AGCTTCTGCAAA GACAGGAAAGAAAGC TERM 83 40270 - 40244 - g 73 -9.5 -3.16525 | overlap 40243 40240 ATAAAGACAAAGAAC TTGCTGAAGCT TTCTT AGCTTCTGCAA AGACAGGAAAGAAAG TERM 84 40358 - 40345 - g 100 -6.7 -6.07374 | ATAAAAAAGAAAAAA TCTCC ATTA GGAGA TATAAAAAATACTGA TERM 85 40382 - 40368 - g 78 -2.8 -5.43414 | overlap 40370 AGGAGATATAAAAAA TACTGA AAC CCAGCA TACTACTATGGAAGA TERM 86 40642 - 40631 - g 76 -4.4 -5.1471 | AGGATAAAAAAGAAA CTTC CGAG GAAG TAGCGGATGATAAAG TERM 87 41326 - 41301 - g 74 -4.7 -5.00467 | gap 1, overlap 41302 GGAAGAAGAAGAAAA GCGTAAGC-GAG CTA CTCTGCCTACGG GATCTTTCATTCTCA TERM 88 41667 - 41657 - g 75 -5.4 -4.72272 | overlap 41642 TCTTGTTATCAAAAA GAAC AGA GTTC AAAGGTGTCAGTATG TERM 89 41685 - 41703 + G 71 -7.4 -3.96148 | AGGTGTCAGTATGCA CTCTCCAG AAC CTGGACAG TTTGTGATCACAGGA CCA00030 39754 - 42231 + | FHA domain-containing protein CCA00031 42278 - 42529 + | hypothetical protein CCA00032 42553 - 42813 + | hypothetical protein CCA00033 42832 - 43281 + | hypothetical protein TERM 90 43628 - 43601 - g 70 -5.7 -4.40311 | gap 1, overlap 43604 ATAAACAACCTAAAA GAGC-GTTTGTG GGACG CACAAACAACTC TAAACCAAGATCAAA TERM 91 43931 - 43913 - g 83 -11.8 -3.20227 | opp_overlap 43912 43917, overlap 43911 43917 GTGCAACGAGCAACA CAAAGAGC AGA GCTCTTTG CTAGTATCGTAGGAA TERM 92 43927 - 43917 - g 73 -6.8 -4.25347 | opp_overlap 43912 43917, overlap 43913 43911 AACGAGCAACACAAA GAGC AGA GCTC TTTGCTAGTATCGTA CCA00034 43325 - 43993 + | hypothetical protein TERM 93 44667 - 44655 - g 75 -7.7 -4.04141 | opp_overlap 44655 GAAGAAGGAATGAAA CGATC GGT GATCG TCGTTTCTACATCCG TERM 94 45110 - 45094 - g 75 -9.5 -3.36749 | opp_overlap 45078 GATTGCTAACAGCAA TTGTTCC TGA GGAACAA AGACGCATCATAGGA sctN 43995 - 45323 + | type III secretion system ATPase CCA00036 45344 - 45862 + | hypothetical protein TERM 95 46560 - 46583 + G 72 -9.6 -2.94695 | opp_overlap 46564 ACAATTGCCAACTAT TGAAGAGGTG CAAA CACCTCTACA TATGATTGCTGCTAC TERM 96 46579 - 46564 - g 70 -9 -3.13164 | opp_overlap 46560 TTGCCAACTATTGAA GAGGTG CAAA CACCTC TACATATGATTGCTG CCA00037 45853 - 46701 + | hypothetical protein TERM 97 46787 - 46812 + G 95 -13.3 -3.74251 | opp_overlap 46787 GTTCTTTAGTAAAAA CGGAAGAAGGG GTTT CCCTTCCTCCG TTTCCTGAAGATCTA TERM 98 46812 - 46787 - g 100 -15.5 -4.72272 | opp_overlap 46787 GTTCTTTAGTAAAAA CGGAAGAAGGG GTTT CCCTTCCTCCG TTTCCTGAAGATCTA TERM 99 47238 - 47258 + G 71 -6.1 -4.19735 | overlap 47234 47239 CACTTTTGGGTTAGA TGGAAACTC TAT GCGTTTCCG TTTACTTTTCCCAGA sctQ 46714 - 47829 + | type III secretion system protein TERM 100 48347 - 48358 + G 70 -5.8 -4.32857 | opp_overlap 48347 AAGTTCTATAGATAA GGAC GCTC GTCC TTTATATTTAGGAAC TERM 101 48413 - 48434 + G 75 -10.3 -3.25539 | opp_overlap 48413 48433, overlap 48411 ACGTCAGGGAGATAA GATTTCTGA ACTT TCAGAAATC TATTCCTTAGGCTTA TERM 102 48434 - 48413 - g 79 -10.3 -3.52102 | opp_overlap 48413 48411, overlap 48433 ACGTCAGGGAGATAA GATTTCTGA ACTT TCAGAAATC TATTCCTTAGGCTTA TERM 103 49074 - 49059 - g 78 -2.6 -5.40072 | gap 1, overlap 49062 TTCCGGTTAAAAAAA CAAGGAA AGG TTCCT-G AGATTTTTACTACTT TERM 104 49072 - 49062 - g 75 -5.4 -4.79949 | overlap 49059 CGGTTAAAAAAACAA GGAA AGG TTCC TGAGATTTTTACTAC pkn5 47847 - 49352 + | serine/threonine-protein kinase TERM 105 50792 - 50774 - g 80 -8.2 -4.38129 | overlap 50719 50776 ATACAACTACTAAAA TCTCTGGA TAT TCCAGAAA TGGCACATACATTAG sctC 49349 - 52078 + | type III secretion protein SctC TERM 106 52154 - 52196 + T 93 -7.2 -5.4505 | gap 1, opp_overlap 52154 TACTTCAGGGGGAAA GCCAAGAAAACATC-GTCG GCCGTA TGATTGTTGTTTTCTTGGC TTTTTTATTCCCCCA TERM 107 52339 - 52325 - T 76 -4.4 -5.10077 | AAACATGGTAAAAAA TATTTT CAG AAAATA AAAAGAACACTTTCC TERM 108 52405 - 52426 + T 85 -8.9 -4.10188 | TAAAGAGTACGATCA TCTCATAAT AGCG ATTATGAGA TTTGGTGTTTTGCTT CCA00041 53783 - 52707 - | ATP:guanido phosphotransferase CCA00042 54285 - 53767 - | hypothetical protein frr 55233 - 54691 - | ribosome recycling factor pyrH 55957 - 55235 - | uridylate kinase tsf 56821 - 55973 - | elongation factor Ts TERM 109 56178 - 56191 + g 73 -2.4 -5.24799 | TTTCCTTGTACTTGA GAAG AAATTA CTTC TTTTTCTCTTTCTAA TERM 110 56345 - 56317 - G 71 -9.6 -2.77135 | opp_overlap 56329, overlap 56316 56314 CTCCAGAAAGAACAG TCACGGAAACAG CTTTC CCGTTGCCGTGA GAGTAAATTCCCACA rpsB 57651 - 56821 - | 30S ribosomal protein S2 TERM 111 56948 - 56975 + g 77 -10.7 -2.8333 | opp_overlap 56947, overlap 56943 56937 56952 ATTGGGGAAACAATT TCAACGCCAAG TTTTTT CTTGGTGTTGA TGATGTTATCCTTAA TERM 112 57989 - 57962 - R 100 -11.4 -5.63517 | GCTTTAAATAAAAAA TCAGAACCCAGA CGCT CCTAGGTTCTGA TAGCGGGACAAAAAG ompA 59197 - 58028 - | major outer membrane protein, porin TERM 113 60689 - 60716 + G 100 -17.2 -3.26449 | opp_overlap 60678, overlap 60682 GGTATTAGTGCAATT GCTGCAACTTCT GGAA AGAAGTTGCAGC TTACATTATCTACAG TERM 114 60792 - 60774 - g 79 -8.9 -3.81951 | overlap 60777 TTTTAGATCATGAAA GAACGGA GCATT TCCGTTC GGCACAATCATTAAA TERM 115 61759 - 61773 + G 76 -7.2 -4.13995 | TCGTTGTTACCTTGA TACGTT TTT AACGTA TTTACTTTCTGGACA pbp2 59801 - 63076 + | PBP2-transglycolase/transpeptidase TERM 116 63066 - 63053 - f 74 -2.4 -5.43514 | opp_overlap 63046 63053, overlap 63046 AAAATAAGGAAAAAA GAAG GTTTTT CTTC TAATTTGTAAGGGCT TERM 117 63881 - 63892 + G 81 -5.8 -5.09762 | opp_overlap 63881 63879 TTTAAATGAAGAAGA TGCG GATG CGCA TTTTTATGTTGGGCT TERM 118 63966 - 63936 - g 79 -9.7 -3.75718 | opp_overlap 63934 63939, overlap 63939 CTTAAGCAAAACCAA CAAGCGTCCGATG CTTTC CATCGTGCGCTTG GAATTAATTTAGAAC CCA00049 63144 - 64151 + | type III secretion chaperone, putative TERM 119 64292 - 64302 + F 100 -4.6 -6.95634 | GGTTTTGTGTTTCAA GGCC ATA GGTC TTTTTTTTTTTTTGA TERM 120 64703 - 64719 + G 72 -10.1 -2.62024 | overlap 64700 GAAAAAATTGCAGGA GCCTGGC TGG GCTAGGC TAAATTATAATCCTA TERM 121 65023 - 65047 + G 77 -7.9 -4.17089 | overlap 65019 65025 AAAAATATTTAGGCA CAGTTGTCTCT CAT AGGGACAACTA TTTTGCAGCTTTAAA TERM 122 65025 - 65045 + G 80 -10.5 -3.68071 | overlap 65019 65023 AAATATTTAGGCACA GTTGTCTCT CAT AGGGACAAC TATTTTGCAGCTTTA TERM 123 65253 - 65268 + G 72 -9 -3.31792 | opp_overlap 65253 65252 65255 TCATTTTCTTCAAAT CAGCTG CATG CAGCTG TTGTAGAGCTCGTAG CCA00050 64506 - 65960 + | cysteine desulfurase activator complex subunit SufB CCA00051 65964 - 66731 + | ABC transporter, ATP-binding protein TERM 124 67466 - 67450 - g 79 -10.9 -3.14404 | opp_overlap 67453, overlap 67453 ATAGCAACTATTGAA GAACAGG GGG CCTGTTC TATAACCCAATATCT CCA00052 66733 - 68007 + | hypothetical protein b1680 67997 - 69217 + | aminotransferase, class V CCA00054 69999 - 69220 - | hypothetical protein CCA00055 70846 - 70193 - | hypothetical protein TERM 125 70267 - 70247 - G 77 -9.9 -3.49475 | TCCATCCTTATAGAA TTGTTCAAA CTC TTTGAACAA TGGCAGGGTTTTGAG TERM 126 70686 - 70672 - G 91 -10 -4.59853 | opp_overlap 70672 TGAACCCTTGAAAAA CTGCAG CTT CTGCAG TTTTTGTAAGAAGAA TERM 127 70672 - 70686 + g 93 -10 -4.82901 | opp_overlap 70672 TGAACCCTTGAAAAA CTGCAG CTT CTGCAG TTTTTGTAAGAAGAA parB 71087 - 71920 + | ParB family chromosome partioning protein TERM 128 71927 - 71951 + T 100 -13.1 -3.95435 | opp_overlap 71931 71934, overlap 71931 AAAGCCTAGTTTTTA TAAAGAAGATC TTA GATCTTCTTTA TTATCTTTTAAAGAA TERM 129 71931 - 71947 + T 93 -9.5 -4.57063 | opp_overlap 71931 71934, overlap 71927 CCTAGTTTTTATAAA GAAGATC TTA GATCTTC TTTATTATCTTTTAA TERM 130 71947 - 71931 - T 81 -9.5 -3.86897 | opp_overlap 71931 71927, overlap 71934 CCTAGTTTTTATAAA GAAGATC TTA GATCTTC TTTATTATCTTTTAA dppF 72927 - 71959 - | peptide ABC transporter, ATP-binding protein TERM 131 72015 - 72026 + g 73 -2.2 -5.31456 | GTTCTGGAATAGGTC CTTG AAGG CAGG TTTTTTGTCGCTTAG TERM 132 72831 - 72851 + g 89 -5.5 -5.40072 | AAAAAGAAACATTAT CAATAGC TCTTGTT GCTATTG TTTTTTTCCAAAACC CCA00058 73882 - 72920 - | peptide ABC transporter, ATP-binding protein TERM 133 73244 - 73228 - G 83 -10.9 -3.72027 | AGGTTTCAGCAACAA CACCCAT ATT ATGGGTG ATGATGAGCAAGCTC TERM 134 73617 - 73603 - G 76 -7.2 -4.20797 | GGAAAATCATAGAAA TTTTCG TTC CGAAAA TCGATCTTAGGATTC CCA00059 73936 - 74610 + | hypothetical protein TERM 135 74843 - 74861 + G 77 -9.6 -3.60104 | overlap 74842 74846 CTGTTTCCGATCCGT TGATCGCC TCT GGCGATTA TATTTATGGTATGAC TERM 136 74846 - 74858 + G 79 -9.1 -3.92485 | overlap 74843 74842 TTTCCGATCCGTTGA TCGCC TCT GGCGA TTATATTTATGGTAT CCA00060 74617 - 75897 + | phosphate permease family protein TERM 137 76346 - 76359 + G 70 -3.1 -4.99035 | TTTGCTGCTGAACTT TCTTC TTAT GGAGA TTTTTATGTGAATGA pgk 75935 - 77146 + | phosphoglycerate kinase TERM 138 77210 - 77156 - f 100 -15.3 -3.28637 | gap 1, opp_overlap 77155 77171, overlap 77157 77171 GATTAAGATTATTAA GCGGTTAGCATTATATCAGGGGCTCT ATAT AGAGCCCCTGATATAATGA-AAGCGT ACGTATATAATGACT TERM 139 77209 - 77157 - f 100 -18.8 -2.567 | gap 1, opp_overlap 77155 77171, overlap 77156 77171 ATTAAGATTATTAAG CGGTTAGCATTATATCAGGGGCTCT ATAT AGAGCCCCTGATATAATGA-AAGCG TACGTATATAATGAC TERM 140 77171 - 77196 + F 100 -17.7 -2.78596 | opp_overlap 77171 77157 77156, overlap 77155 GCGGTTAGCATTATA TCAGGGGCTCT ATAT AGAGCCCCTGA TATAATGAAAGCGTA TERM 141 77196 - 77171 - f 100 -17.7 -2.82516 | opp_overlap 77155 77171, overlap 77157 77156 GCGGTTAGCATTATA TCAGGGGCTCT ATAT AGAGCCCCTGA TATAATGAAAGCGTA CCA00062 77599 - 78990 + | hypothetical protein CCA00063 79009 - 80226 + | hypothetical protein TERM 142 80394 - 80376 - g 72 -10.3 -2.70932 | opp_overlap 80373 80370 CGTGTTGTCGAATTA GCGATCC GTGAT GGATCGC GCGCTCTTGTCTATA TERM 143 80514 - 80526 + G 75 -7.7 -3.97812 | ATTCAGGAGATTTTT TCACG TTC CGTGA TTTCCTATTCCTTAT CCA00064 80322 - 81476 + | hypothetical protein CCA00065 81600 - 82715 + | Nol1/Nop2/Sun family protein CCA00066 83110 - 82721 - | hypothetical protein CCA00067 84462 - 83161 - | D-alanyl-D-alanine carboxypeptidase TERM 144 83795 - 83816 + g 77 -6.5 -4.56607 | overlap 83790 TTTAAAACTCTCTCT TGGCTGAGA TTTG TCGCGGCCA TTTTATAATTGGTAG CCA00068 84573 - 84995 + | hypothetical protein CCA00069 85440 - 84982 - | rsbW protein, putative CCA00070 86008 - 85409 - | hypothetical protein CCA00071 86981 - 86025 - | TPR domain-containing protein TERM 145 87098 - 87127 + H 84 -6 -5.24129 | opp_overlap 87098 87120 TTGTTTGATAAAACA CTTTTTTATTTA GTAAAA TAAATAAAAAGG TTTTTTATGAAAAAG TERM 146 87134 - 87120 - H 70 -4.4 -4.7261 | opp_overlap 87098 87128, overlap 87098 87128 ATTTAGTAAAATAAA TAAAAA GGT TTTTTA TGAAAAAGTTAGTTT CCA00072 87134 - 88018 + | hypothetical protein dnaE 91743 - 88015 - | DNA polymerase III subunit alpha uhpC 93136 - 91769 - | sugar phosphate sensor protein UhpC TERM 147 91952 - 91969 + g 91 -7.7 -5.26316 | gap 1, opp_overlap 91942 91941 91951 CCAACCTGCGAAACC GCTAGCGG TAC CCGC-AGC TTTTTTATGGGATAA CCA00075 93368 - 93586 + | hypothetical protein TERM 148 94787 - 94771 - gf 73 -7.3 -3.94868 | overlap 94765 CATAAGAAATTGAAA GCTGCTT TAA AAACAGC AGATACAGAGAAAGT hisS 93655 - 94947 + | histidyl-tRNA synthetase TERM 149 95475 - 95496 + G 93 -9.5 -5.04325 | overlap 95446 GAGATTACCTTGTTC CTTCTAGGA TATA TCCTGGAAG TTTTTATGCTTTACC aspS 94922 - 96676 + | aspartyl-tRNA synthetase TERM 150 97107 - 97085 - g 89 -7 -5.24129 | GTTTTCGAGAAAAAA GCGAAGGAAA ATC TCTCCTTGGC AGAAAGATTCCTACA TERM 151 97481 - 97464 - g 73 -8.5 -3.78409 | TCAATTTAATCGAAA CTACAGA TGAT TCTGTAG CAGCACAAAACACAG mip 96752 - 97519 + | peptidyl-prolyl cis-trans isomerase Mip TERM 152 97569 - 97536 - g 75 -9.8 -3.2963 | gap 1 AGTAGTTCTTTATAA TCCTGATATTCCCCA GAACA CGGGGAATAT-AGGA AGAACGTGTATAGCT CCA00079 97516 - 97986 + | RNA methyltransferase trx 98291 - 97983 - | thioredoxin CCA00081 98417 - 98515 + | hypothetical protein CCA00082 98701 - 98856 + | hypothetical protein CCA00083 99311 - 100027 + | hypothetical protein CCA00084 100006 - 100467 + | hypothetical protein dnaQ-1 100477 - 101226 + | DNA polymerase III subunit epsilon TERM 153 101369 - 101380 + F 70 -4.4 -4.81083 | opp_overlap 101355 AGGAAGCGCTGTCTC TTCC CGAG GGAA TTTTTAATGCTTAAG TERM 154 101483 - 101470 - g 73 -8.1 -3.8613 | opp_overlap 101469 101467 TCTAAATACCAATAA CACCG TATT CGGTG GTCTATTAATGAGTT CCA00086 101387 - 101857 + | cytosolic acyl-CoA thioester hydrolase family protein TERM 155 103137 - 103125 - g 74 -9.1 -3.46169 | opp_overlap 103125, overlap 103119 103118 AATTATAAGCGAGAA GGAGC AAA GCTCC TTGTCAACCTAACCA TERM 156 103125 - 103137 + G 72 -9.1 -3.31144 | opp_overlap 103125 103119 103118 AATTATAAGCGAGAA GGAGC AAA GCTCC TTGTCAACCTAACCA TERM 157 103331 - 103341 + G 71 -6.8 -4.13728 | opp_overlap 103331 103330 GCGTTATAGAAAAGC CTCC CCA GGAG TTTTACAAGTATCTC lnt 101865 - 103490 + | apolipoprotein N-acyltransferase TERM 158 103833 - 103821 - g 79 -9.1 -3.93782 | overlap 103814 GTAGTGAAGAGGAAA TCCCC ATA GGGGA CGGAAGCTCTCACGT TERM 159 104058 - 104089 + G 73 -8 -3.91597 | opp_overlap 104058 104057, overlap 104082 TTATTACGGAAGAAT CTTTCCGTAAGGAG ATCG CTCCTTGCAGAACG TTTGCTCTGTATAAT lpxC 103505 - 104362 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase fabZ 104377 - 104841 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 160 105098 - 105083 - g 78 -7.6 -4.3898 | ATCAGGGGGAGAAAA CCTATG TTAC CATAGG AGAAAATTGCGAGAT TERM 161 105247 - 105268 + G 70 -8.7 -3.40899 | opp_overlap 105247 105246 105249 GTGATTTTAAGTAAT CATGCACAG TTAG CTGGGCATG TTGTCGTCGAGGATT TERM 162 105516 - 105499 - g 79 -4.9 -5.03747 | gap 1 AAAGTGTTTAAAAAA GTCTATCG TTC CGA-AGAC AGCTTCTCTGAATCT lpxA 104851 - 105690 + | UDP-N-acetylglucosamine acyltransferase fmt 105677 - 106642 + | methionyl-tRNA formyltransferase CCA00092 106758 - 107732 + | hypothetical protein TERM 163 107767 - 107791 + F 100 -13.7 -6.08342 | AAGGCAATGCTGAAG TCGCTTCTAGG TTT TCTAGAAGCGA TTTTTTTATTTATTA TERM 164 107918 - 107929 + F 79 -4.4 -5.26119 | opp_overlap 107897, overlap 107919 CCTTTATTTTCTTAA GGAA AAGG TTCC TTTTCTTTTTAGGGA TERM 165 107919 - 107934 + F 74 -6.2 -4.60255 | opp_overlap 107897, overlap 107918 CTTTATTTTCTTAAG GAAAAG GTTC CTTTTC TTTTTAGGGAATTCT TERM 166 107978 - 108007 + F 81 -9.3 -3.71998 | opp_overlap 108005 CTAAAACGATTTGCC TGGTTGCTCTCAC CTGA GTGTGAACAACCA TTGTGTTAATGGGTA TERM 167 108161 - 108151 - g 79 -5.4 -4.90778 | GTTACTCAAATAAAA GTTG ATT CAAC TGATGGTTACAATGC rplC 108028 - 108693 + | 50S ribosomal protein L3 TERM 168 108722 - 108732 + G 71 -4 -4.84359 | CTAATGGTTTTATTG TCAA AGT TTGA TTTTTCTGGGAATAA TERM 169 109349 - 109337 - g 73 -5.5 -4.58395 | GTGATTTCCGAAAAA GCCCT GAA AGGAC TCGCTGGGCATCTTA rplD 108710 - 109384 + | 50S ribosomal protein L4 TERM 170 109512 - 109500 - g 70 -3.3 -4.87389 | overlap 109501 GAGGGTAAAAAGAAA GGCAG TTT CTGCA AGCATCCAAAGTATA rplW 109401 - 109736 + | 50S ribosomal protein L23 TERM 171 110144 - 110127 - g 86 -9.9 -4.08693 | overlap 110125 AAAGGCATAAAAAGA GGAGATG AAGT CATCTCC GGAGAAGGTAGCCCG rplB 109758 - 110612 + | 50S ribosomal protein L2 rpsS 110618 - 110884 + | 30S ribosomal protein S19 TERM 172 110994 - 111009 + G 70 -3.2 -4.85599 | overlap 110995 TAAGTGTTATGGAAG CTCAGC AGCA GCTGAA TTTTTCTCAGCTAAA rplV 110903 - 111238 + | 50S ribosomal protein L22 TERM 173 111398 - 111385 - g 84 -2.4 -5.8187 | CATTTAAGAAAAAAA CCTT CTTGTC AAGG GGCTGCGGGCTTTAT TERM 174 111907 - 111890 - g 70 -9.1 -3.09968 | CAGCTAATGCTAATA CTGGCGC TACG GCACCAG CTGCACAATAGTTGT rpsC 111247 - 111918 + | 30S ribosomal protein S3 rplP 111945 - 112361 + | 50S ribosomal protein L16 TERM 175 112546 - 112531 - g 76 -3.3 -5.20333 | TATGTACAAGAAAAA CATAG CTCGAT CTATG ACGGTCATGCAAGAA rpmC 112367 - 112585 + | 50S ribosomal protein L29 rpsQ 112578 - 112829 + | 30S ribosomal protein S17 rplN 112864 - 113232 + | 50S ribosomal protein L14 rplX 113247 - 113588 + | 50S ribosomal protein L24 TERM 176 113797 - 113782 - g 83 -7.6 -4.83169 | ATTTCCGGACAAAAA CCTTTG GTAA CAAAGG CTAGAAATTCTATCG TERM 177 113922 - 113936 + G 71 -4.9 -4.65895 | opp_overlap 113922, overlap 113923 AGTCTCTCCTAGAAT TCGCG ACTTC CGCGG TTTTTCAATGAAAGG rplE 113590 - 114132 + | 50S ribosomal protein L5 TERM 178 114201 - 114218 + G 71 -6.3 -4.15664 | opp_overlap 114201 AACACGAATCCGAAA TGCTTTG AAAG CAGAGCA TTTGTATGTGGATTT TERM 179 114447 - 114466 + G 77 -9.4 -3.61239 | AATCCCTTATGTTTT CGGAAATA TGGG TATTTCCG TTCTCTCTACATCTC rpsH 114151 - 114552 + | 30S ribosomal protein S8 rplF 114584 - 115135 + | 50S ribosomal protein L6 rplR 115158 - 115529 + | 50S ribosomal protein L18 rpsE 115545 - 116042 + | 30S ribosomal protein S5 rplO 116035 - 116469 + | 50S ribosomal protein L15 TERM 180 117586 - 117570 - g 71 -3.8 -4.98531 | TTCTGAAATGAAAAA GAATAA CGCCT TTATTC CTGGAATTCGACAAG secY 116494 - 117867 + | preprotein translocase subunit SecY rpsM 117923 - 118291 + | 30S ribosomal protein S13 rpsK 118312 - 118710 + | 30S ribosomal protein S11 TERM 181 118863 - 118877 + GF 71 -8.6 -3.12402 | opp_overlap 118863, overlap 118872 GAGCCTCTAGAGAGA GGTATG GGT CATACC TTAGGTAATGCTTTG TERM 182 118877 - 118863 - gf 71 -8.6 -2.9914 | opp_overlap 118863 118872 GAGCCTCTAGAGAGA GGTATG GGT CATACC TTAGGTAATGCTTTG rpoA 118680 - 119861 + | DNA-directed RNA polymerase subunit alpha TERM 183 119998 - 119976 - g 76 -7 -4.44099 | opp_overlap 119976, overlap 119972 AAGAAAGAATAGAAA CTACTTTGCC TAA GGCAAAAGAG TTGCGTCGTTGTGCT rplQ 119870 - 120298 + | 50S ribosomal protein L17 TERM 184 120288 - 120302 + F 84 -5.7 -5.42259 | GTATTATAGAATTTT TAGCC GACTA GGCTA TTTTTTTGCGAATAC gap 120337 - 121344 + | glyceraldehyde-3-phosphate dehydrogenase CCA00117 121357 - 122199 + | hypothetical protein CCA00118 122709 - 123674 + | hypothetical protein TERM 185 123740 - 123750 + F 74 -5.4 -4.65078 | AACGCTACACACTCC GTTC GGG GAAC TTTTCTTAAGCCTGT ruvC 123780 - 124286 + | Holliday junction resolvase ruvA 124286 - 124909 + | Holliday junction DNA helicase motor protein ndk 124974 - 125399 + | nucleoside diphosphate kinase CCA00122 126117 - 125413 - | lipoate-protein ligase A-related protein gidA 127939 - 126104 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA dnaB 129752 - 128334 - | replicative DNA helicase TERM 186 128986 - 128975 - G 86 -4.4 -5.36441 | TCTCTAGAGAAAAAA TTCC TATA GGAA GCCGACTTTGAAAAC TERM 187 129488 - 129501 + g 79 -6.7 -4.53047 | AGCCAGGGCCCCCAA TCACC GTAA GGTGA TTTCTTCTCTTTAGT TERM 188 130758 - 130774 + G 73 -5.9 -4.64598 | ATATGATTACCGAGC TCTTTTC TTT GGAAAGA TTTTTACAGTGGTTC CCA00125 130414 - 130920 + | CDP-alcohol phosphatidyltransferase TERM 189 131417 - 131435 + G 100 -10.3 -5.59655 | opp_overlap 131415 GGTTGGCTAAGTAGT CGGTGTC CTAGA GACACCG TTTTTTATTCCTTTA tlc-1 131156 - 132796 + | ADP, ATP carrier protein TERM 190 132792 - 132827 + F 80 -2.6 -5.66989 | opp_overlap 132803, overlap 132803 AAGAAGTTGCTACGC TATAGTTTAAAGGGCT TTAT AGCCCTTTTTATCATA TTTTTTTGATCTTTA TERM 191 132816 - 132803 - f 73 -8.1 -3.63805 | opp_overlap 132792 132803 ACGCTATAGTTTAAA GGGCT TTAT AGCCC TTTTTATCATATTTT TERM 192 132803 - 132816 + F 90 -8.1 -5.02201 | opp_overlap 132803, overlap 132792 ACGCTATAGTTTAAA GGGCT TTAT AGCCC TTTTTATCATATTTT CCA00127 132894 - 133892 + | protease IV, putative TERM 193 134595 - 134564 - g 74 -6 -4.40358 | gap 1, opp_overlap 134564 AGGTATTTTAGAAAA TCTTGATGAGTTGAC AGG ATCTACTCA-CAAGA TGCTTTCGGAGCAAA polA 133923 - 136532 + | DNA polymerase I TERM 194 136688 - 136703 + G 73 -7.6 -4.00445 | opp_overlap 136687 CGTCGCGTTATAGAT CTTCTG GGAC CAGAAG TTGTTGTTGATAATG coaE 136526 - 137134 + | dephospho-CoA kinase TERM 195 137414 - 137401 - g 71 -5.3 -4.55128 | opp_overlap 137408 ATTGTGAAAGCAAAA TCTGA GCGT TCAGA CGAGCTTTTGATTGG TERM 196 138173 - 138157 - g 83 -9.5 -3.85817 | AGTGCTCTGCATAAA CCAAAGA AAT TCTTTGG CGCCGCTAGAAATAT rho 137131 - 138525 + | transcription termination factor Rho TERM 197 138576 - 138608 + T 78 -7.1 -4.40963 | opp_overlap 138570 138578 138579, overlap 138571 138578 138579 CTTTGATAAGTAAGA AACCTACGGTCTTAA TTA TTAAGACTGTAGATC TTATTTTTCACGCGT TERM 198 138578 - 138606 + T 83 -9.7 -3.80746 | opp_overlap 138570 138578 138579, overlap 138576 138571 138579 TTGATAAGTAAGAAA CCTACGGTCTTAA TTA TTAAGACTGTAGA TCTTATTTTTCACGC TERM 199 138606 - 138578 - T 100 -9.7 -4.36596 | opp_overlap 138578 138576 138571 138579, overlap 138570 138579 TTGATAAGTAAGAAA CCTACGGTCTTAA TTA TTAAGACTGTAGA TCTTATTTTTCACGC TERM 200 138605 - 138579 - T 86 -11 -3.21235 | opp_overlap 138578 138576 138571 138579, overlap 138570 138578 TGATAAGTAAGAAAC CTACGGTCTTAA TTA TTAAGACTGTAG ATCTTATTTTTCACG TERM 201 138579 - 138605 + T 87 -13.2 -2.87725 | opp_overlap 138570 138579 138578, overlap 138578 138576 138571 TGATAAGTAAGAAAC CTACGGTCTTAA TTA TTAAGACTGTAG ATCTTATTTTTCACG TERM 202 138661 - 138671 + T 77 -5.4 -4.91712 | TTTAGCAAAGCTCGA GATC ATG GATC TTTTTATCACTTCAC CCA00131 139045 - 138785 - | hypothetical protein TERM 203 139058 - 139039 - G 73 -8 -3.90489 | opp_overlap 139042, overlap 139042 CAAAAAATAAACGAA TAAGCATA TCCT TATGCTTA TAATGAGAGTTTTTG pyrE 139107 - 139727 + | orotate phosphoribosyltransferase glgC 139864 - 141192 + | glucose-1-phosphate adenylyltransferase CCA00134 141307 - 142050 + | hypothetical protein CCA00135 142047 - 142616 + | hypothetical protein TERM 204 142700 - 142710 + F 73 -4 -5.08088 | AGCTTTTTAGCCATT CTTT CAA AAAG TTTTTGTTCAGAGTT CCA00136 142809 - 143561 + | periplasmic amino acid-binding protein, putative hemH 144522 - 143566 - | ferrochelatase CCA00138 144619 - 145626 + | hypothetical protein TERM 205 145787 - 145804 + G 81 -5.6 -5.01811 | opp_overlap 145787 GTACGCGTTATGAAA TAGCCA GTGCCG TGGCTA TTTTTGGTTTAGTCC CCA00139 145681 - 146022 + | hypothetical protein CCA00140 146094 - 146300 + | hypothetical protein CCA00141 146811 - 146975 + | hypothetical protein TERM 206 146997 - 147020 + F 100 -15.4 -4.08557 | opp_overlap 147001, overlap 147001 TTCTCTTGTGTTGAG GAAACAGGGG ATAA CCCCTGTTTC TTGTTGTTTAAAACA TERM 207 147016 - 147001 - f 87 -10.4 -3.72576 | opp_overlap 147001 146997 CTTGTGTTGAGGAAA CAGGGG ATAA CCCCTG TTTCTTGTTGTTTAA TERM 208 147001 - 147016 + F 100 -10.4 -4.62803 | opp_overlap 147001, overlap 146997 CTTGTGTTGAGGAAA CAGGGG ATAA CCCCTG TTTCTTGTTGTTTAA TERM 209 147716 - 147726 + F 71 -5.4 -4.55287 | TGTAGTAGTCTTTGG CAGA GGA TCTG TTTTATATGAATAAA CCA00142 147733 - 149850 + | peptide ABC transporter, periplasmic peptide-binding protein, putative TERM 210 150835 - 150846 + G 72 -4.4 -4.7373 | ACAGTGGCCTCCAGT CTTC TCCG GAAG TTTTTAATCAGCTGA CCA00143 149832 - 151313 + | peptide ABC transporter, permease protein, putative TERM 211 151470 - 151482 + G 71 -4.1 -4.88295 | TATTTTAGTGAAGTG GGAAG GCT CTTTC TTTTTCCCTTTATTT CCA00144 151318 - 153051 + | peptide ABC transporter, permease protein, putative ada 153575 - 153048 - | DNA methyltransferase CCA00146 154561 - 153590 - | hypothetical protein TERM 212 154465 - 154447 - G 71 -7.5 -3.88232 | opp_overlap 154446 154462 TTCCTGATACAATAA TTCCGTA GTTGT TACGGAA GGTTTCCTTCATAAC pheT 156942 - 154561 - | phenylalanyl-tRNA synthetase subunit beta TERM 213 157163 - 157175 + Gr 71 -4.9 -4.52703 | TCGAAAGGATATTTA TAAAC TAC GTTTA TTTTCTGGTCCTTTA TERM 214 157327 - 157348 + Gr 72 -9.5 -2.65815 | overlap 157330 TAAAGTTATGGGCGT TGAGTGTGG CCAT CCACACTTA TGATGTGGATGTGGG TERM 215 157330 - 157345 + Gr 75 -9 -3.47841 | overlap 157327 AGTTATGGGCGTTGA GTGTGG CCAT CCACAC TTATGATGTGGATGT CCA00149 158376 - 158065 - | hypothetical protein CCA00148 157050 - 158141 + | LysM domain-containing protein CCA00150 159160 - 158366 - | hypothetical protein CCA00151 159440 - 160030 + | hypothetical protein recO 160729 - 160022 - | DNA repair protein RecO TERM 216 160399 - 160412 + g 72 -4.5 -4.68705 | opp_overlap 160399 160392 AAAATAAGGAAAAGA GCTCT TGAG AGGGC TTTTCTTGCCATTGT TERM 217 160489 - 160502 + g 72 -3.1 -5.1287 | AAAGAGAGGATTTTA TCTCT GAAA AGGGA TTTTTTACCTCTGCG CCA00153 161309 - 160734 - | hypothetical protein TERM 218 160800 - 160819 + gr 100 -12.2 -4.45771 | AGAGTAGCTGGGCAG CCCTGGAT AAAA ATCCAGGG TTTGTGTTTTGGGAT CCA00154 161946 - 161263 - | hypothetical protein TERM 219 161301 - 161320 + g 70 -2.8 -5.01553 | overlap 161302 161305 CGATGGTAGGTTCGA TGAGGACA TAAT TGTCGTCG TTTTGTTTATAGATT TERM 220 161639 - 161654 + gr 78 -2.5 -5.40072 | ATTTTCTGATGTTTA TTCGC TAAGGT GCGGA TTTTTTTAAAGGCGG TERM 221 162021 - 162007 - R 74 -2.1 -5.47914 | AAAAATCAGAAAAAA GGAAA GAGAT TCTCC TATCTGTATTATAAG CCA00155 163408 - 162248 - | sigma-54 dependent response regulator TERM 222 162375 - 162387 + g 71 -4.1 -4.88388 | opp_overlap 162364 AGAGCAGAACGTGCG CTTTC TGA GAGAG TTTTTATAGGCTTAT TERM 223 162795 - 162779 - G 78 -3.7 -5.1861 | opp_overlap 162785 TTCATGACCAAAAAA CTCTG ACTCTAA CAGAG TTTCGGGAATAGCTG TERM 224 162841 - 162851 + g 79 -5.4 -4.87665 | TGTAGGGTTGGCAAG CTCT AGG AGAG TTTTTATGAATGAAA TERM 225 162885 - 162869 - G 84 -6.6 -4.90266 | TTTATGAATGAAAAA GGAAAG GACTT CTTTCC CACATCCAGATTCCC TERM 226 163404 - 163422 + g 72 -4.6 -4.74504 | AGCACTCTTTCTATA TTCATGAG GCG CTTGTGAA TTTTTAAGTTAAGAT CCA00156 163591 - 166611 + | hypothetical protein CCA00157 167679 - 166621 - | sensor histidine kinase TERM 227 166793 - 166782 - G 72 -4.4 -4.74132 | overlap 166783 ACAGCTTATCAAAAA TCTC TTGA GAGA GCTGTCCAGGATTGG TERM 228 167135 - 167148 + g 71 -6.7 -4.07568 | overlap 167134 CGCTGGTGGCGTGGG GAGGA GAGC TCCTC TTTTAACAAAGAGGC TERM 229 167374 - 167387 + g 71 -5.3 -4.57073 | opp_overlap 167374 ATCATTTTTCGATAA CGTTA GTCG TAACG TTTTTGGGGAGGATA CCA00158 167986 - 167660 - | hypothetical protein TERM 230 167926 - 167948 + g 87 -3.4 -5.75342 | opp_overlap 167926 TTTCCGTGAGATCAA GAATGGCT AGGAAAA AGCCTTTC TTTTTTTTAAGGAGA CCA00159 168922 - 168215 - | hypothetical protein TERM 231 169670 - 169692 + G 75 -7.8 -3.97331 | opp_overlap 169663 CACGAAGACTTCTGT GAGAAGGAAT TCC ATTACTTCTC TTCTTTCAATGAATT CCA00160 169049 - 169741 + | HAD family hydrolase TERM 232 170428 - 170453 + T 81 -9.7 -3.40371 | overlap 170429 AGAGAGATCGTTAGG TTGCCTTTGCC AGCC GGCATAGGCAG TTCCTTGATAGGCTA TERM 233 170429 - 170452 + T 81 -11 -2.63901 | overlap 170428 GAGAGATCGTTAGGT TGCCTTTGCC AGCC GGCATAGGCA GTTCCTTGATAGGCT ispD 171131 - 170487 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CCA00163 172089 - 171115 - | hypothetical protein TERM 234 171270 - 171251 - G 77 -9.4 -3.53444 | opp_overlap 171250 171249 171251 TGACCTCGCGCTAAA TCTGGATT TTCT AATCCAGA GATTTTGTTCATAAT TERM 235 171251 - 171270 + g 70 -9.4 -2.65344 | opp_overlap 171251, overlap 171250 171249 TGACCTCGCGCTAAA TCTGGATT TTCT AATCCAGA GATTTTGTTCATAAT TERM 236 171954 - 171969 + g 70 -2.5 -5.01732 | GAACAATGCGCAACC CATGC AAGTGG GCGTG TTTTTTAGGCAGCTT CCA00164 172424 - 172161 - | BAF60b domain-containing protein TERM 237 172394 - 172410 + gH 76 -2.3 -5.49729 | TATTGACGGGGTTCA TAAAAGC AGA GTTTTTG TTTTTTTGACTCATT TERM 238 172442 - 172475 + GH 80 -2.4 -5.56264 | opp_overlap 172442, overlap 172444 GTTACTCCTAGTAAA GGTGGTATGAAGAG ACGGAG CTCTTCATCGCAAC TTTTTTATCTTTCAA CCA00165 172424 - 172555 + | hypothetical protein TERM 239 172905 - 172923 + G 79 -3.1 -5.4833 | opp_overlap 172905 ATGAAGAATTCAAAA GTAAGGT AGATA ACCTGAC TTTTTTCTTAAATGA prfB 172781 - 173794 + | peptide chain release factor 2 yhhY 173791 - 174303 + | acetyltransferase CCA00168 174344 - 174898 + | hypothetical protein CCA00169 174882 - 175598 + | hypothetical protein TERM 240 175630 - 175591 - T 70 -8 -3.30918 | opp_overlap 175592 175593 175594, overlap 175589 175592 AGGTATATCACAATA TGGCTTAAGGCTTTTCTA TACT TAGAAAAGCCTTAAGAGT TTTGCTTAGGAGTGT TERM 241 175592 - 175629 + T 100 -11.5 -4.41494 | opp_overlap 175591 175589 175592, overlap 175593 175594 GGTATATCACAATAT GGCTTAAGGCTTTTCTA TACT TAGAAAAGCCTTAAGAG TTTTGCTTAGGAGTG TERM 242 175629 - 175592 - T 82 -11.5 -2.58069 | opp_overlap 175592 175593 175594, overlap 175591 175589 GGTATATCACAATAT GGCTTAAGGCTTTTCTA TACT TAGAAAAGCCTTAAGAG TTTTGCTTAGGAGTG TERM 243 175593 - 175628 + T 95 -15 -3.24414 | opp_overlap 175592 175591 175589, overlap 175592 175594 GTATATCACAATATG GCTTAAGGCTTTTCTA TACT TAGAAAAGCCTTAAGA GTTTTGCTTAGGAGT TERM 244 175594 - 175627 + T 100 -18.5 -2.54166 | opp_overlap 175592 175591 175589, overlap 175593 175592 TATATCACAATATGG CTTAAGGCTTTTCTA TACT TAGAAAAGCCTTAAG AGTTTTGCTTAGGAG CCA00170 178278 - 175636 - | hypothetical protein TERM 245 178317 - 178301 - H 78 -2.3 -5.72053 | opp_overlap 178302 178313, overlap 178302 CAACTAAATAAAAAA CTCTAAT TTA ATTAGAT TGTAAAACAAACTAT murA 178511 - 179845 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase argS 181542 - 179848 - | arginyl-tRNA synthetase TERM 246 180703 - 180693 - G 81 -6.8 -4.7254 | opp_overlap 180693 AGCCCTCATGAAAAA CGCA TTT TGCG TTATCAGAAATCGTA TERM 247 180903 - 180918 + g 85 -5.4 -5.1925 | opp_overlap 180897 180903 CTTGTAAAGCAACGA CGTTCG TTTG TGAACG TTTTTTAAATTCTGC TERM 248 180946 - 180957 + g 79 -3.6 -5.39721 | TGCATCCTCAGCAAA GCGT GCAT GCGC TTTTTTATATAATAC CCA00173 182189 - 181542 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative TERM 249 181919 - 181903 - G 71 -6.5 -4.21827 | TTAAAGAGTTCAAAA GCAGCCT TAA ATGCTGC AGAATTTCCCCCACC cmk 182836 - 182186 - | cytidylate kinase TERM 250 182323 - 182347 + g 71 -7.1 -3.90744 | TATCGGCTTCATCAC GCTTCACAAGC TCA GCATGTAAAGC TTCTTTCGAAAGAGA TERM 251 182726 - 182743 + g 82 -11.3 -3.09557 | GTGTGTGTAGGCTAA GGTGCGA TACA TCGCACC TGTATTGCAATAGTT CCA00175 183753 - 182833 - | phosphatidate cytidylyltransferase TERM 252 183294 - 183271 - G 80 -6 -4.72846 | CCACACACCTAAAAA GGGTTCATCC GTGT GGATAAATCC ATAAAGAATGTGTAG uppS 184508 - 183756 - | undecaprenyl diphosphate synthase TERM 253 184002 - 184022 + g 76 -4.7 -5.08824 | AGAAGATATTTTTTG CTCTACCAA ATC TTGATGGAG TTTTTTAAATGCACG CCA00177 185126 - 186229 + | hypothetical protein TERM 254 186343 - 186326 - f 73 -7.1 -4.0162 | GTCCTAGATCATAAA TACAATC TTAG GATTGTA GTGACGACTTCATAA TERM 255 186905 - 186918 + G 74 -3.9 -5.14682 | opp_overlap 186905 ACTACCGCTTTAACA GAAAA AGAC TTTTC TTTTGTTTCTTATAA TERM 256 188130 - 188154 + G 77 -6.3 -4.65078 | overlap 188122 ATCAGCAGCGTGTAC GCGCTGCTGTG CCT CACCGAAGTGC TTTTGTTGAAAATCT CCA00178 186476 - 190690 + | bifunctional preprotein translocase subunit SecD/SecF TERM 257 190680 - 190708 + F 83 -9.7 -3.72576 | opp_overlap 190681, overlap 190681 190683 GTAAAGAGGAAAGAA ACAGGCAATAATT ACA AGTTATTGCCTGC TTTGGTACAGAAGGA TERM 258 190707 - 190681 - f 100 -11 -4.59293 | opp_overlap 190680 190681 190683 TAAAGAGGAAAGAAA CAGGCAATAATT ACA AGTTATTGCCTG CTTTGGTACAGAAGG TERM 259 190681 - 190707 + F 87 -13.2 -2.83403 | opp_overlap 190681, overlap 190680 190683 TAAAGAGGAAAGAAA CAGGCAATAATT ACA AGTTATTGCCTG CTTTGGTACAGAAGG TERM 260 190683 - 190705 + F 77 -10 -2.96695 | opp_overlap 190681, overlap 190681 190680 AAGAGGAAAGAAACA GGCAATAATT ACA AGTTATTGCC TGCTTTGGTACAGAA recJ 190778 - 192550 + | single-stranded-DNA-specific exonuclease RecJ TERM 261 192587 - 192600 + F 79 -3.9 -5.52096 | ACCCCCACCATCGCA GTATT TTCT AATAC TTTTTTCTTGAGTTT TERM 262 192975 - 192993 + F 74 -6.8 -4.27316 | TCCACTTTTAACTCC CATATTTG CAG CAGATATG TTTTCAGTTCCCCAA CCA00180 192991 - 194145 + | hypothetical protein TERM 263 195259 - 195270 + G 79 -5.8 -5.00616 | ACCCTACAGCTACTC CAGC AGAT GCTG TTTTTTCGGGAACCG CCA00181 194760 - 195305 + | DNA binding domain-containing protein TERM 264 195436 - 195463 + F 86 -5.6 -5.63517 | AAATTTCCATAGAAG CTCTGTAGCTTT TACT AGGGATACAGAG TTTTTTCTTTGCCCG TERM 265 196257 - 196271 + G 70 -5.7 -4.4078 | TACTCCTAAACACCT GCTTC TTTAC GAAGC TTTTGGTTGGGAACC TERM 266 196941 - 196927 - g 80 -7.8 -4.44448 | opp_overlap 196927 ATTACTGGAAAGAAA CAGGGA TTA CCCCTG TTTGACTCTATGGAG gltX 195577 - 197094 + | glutamyl-tRNA synthetase CCA00183 197325 - 197137 - | hypothetical protein TERM 267 197323 - 197312 - G 70 -3 -5.1287 | opp_overlap 197312 GCCATATGTAAAAAA GAAA ATCT TTTC ATTTCCAACTTCCTA TERM 268 197711 - 197659 - H 71 -7.4 -3.60098 | opp_overlap 197658 ATTGTTCATGGGAAA GCGCTTTATTAATTATTAAAAA TTGAAAGGG TTTTTAATAAACAATCAAGCGC GTTAAGTTTTCTAAT omcA 197747 - 198013 + | OmcA TERM 269 198048 - 198084 + F 87 -10.3 -3.87815 | TACTTAAATTGGTTA GGTAGTTAGGAGGTAAA TTA TTTCCCTGTTAACTACC TTTATGAAAATAAAC TERM 270 198276 - 198288 + G 71 -6.3 -4.27441 | CGCTGCTGCAGAGTC TCTTG CTA CAAGA TTTATTGCTAGTGCT omcB 198178 - 199854 + | 60 kDa outer membrane protein TERM 271 199877 - 199932 + F 100 -16.6 -2.81727 | gap 1, opp_overlap 199845 199877 199891 199892, overlap 199892 AAATTCTTTAAAAGA TCTTAAAC-GAAAAAGCCGTCCTAGAT TGC ATCTAGGGCGGTTTTTTTTGTTTCAGA CTTCTTGAAATTCTT TERM 272 199932 - 199877 - f 82 -10 -3.65832 | gap 1, opp_overlap 199877 199892, overlap 199845 199891 199892 AAATTCTTTAAAAGA TCTTAAACGAAAAA-GCCGTCCTAGAT TGC ATCTAGGGCGGTTTTTTTTGTTTCAGA CTTCTTGAAATTCTT TERM 273 199917 - 199891 - f 100 -9.4 -4.99134 | opp_overlap 199877 199892, overlap 199877 199892 ATCTTAAACGAAAAA GCCGTCCTAGAT TGC ATCTAGGGCGGT TTTTTTTGTTTCAGA TERM 274 199892 - 199916 + F 100 -15.1 -6.23545 | opp_overlap 199891 199877 199892, overlap 199877 TCTTAAACGAAAAAG CCGTCCTAGAT TGC ATCTAGGGCGG TTTTTTTTGTTTCAG TERM 275 199916 - 199892 - f 95 -12.9 -3.58396 | opp_overlap 199892 199877, overlap 199891 199877 TCTTAAACGAAAAAG CCGTCCTAGAT TGC ATCTAGGGCGG TTTTTTTTGTTTCAG TERM 276 200011 - 199989 - f 84 -3.6 -5.61824 | opp_overlap 199994 TAAAATCTAAAAAAA TTAAATTAAA AAT TTTAATTAAA TAATGGAGTTGGTTA srp 200065 - 200547 + | hypothetical protein TERM 277 200611 - 200589 - T 84 -12.1 -2.87881 | TAATGTTTTGAGACA TTAGGAGGC GTTTA GCCTCCTAA AGAAATAGCCGCCTT CCA00187 202555 - 200600 - | tail-specific protease precursor, putative TERM 278 202660 - 202644 - R 93 -4.5 -6.06723 | GTCTCCAAAAAAAAA CTATTTA GAA TAAACAG GTTGGTAAAAAAAAT CCA00188 202961 - 202683 - | hypothetical protein TERM 279 202878 - 202863 - G 70 -3.2 -5.00339 | overlap 202865 202868 AGCAAGAATCAAAAA TACAGC CGCC GCCGCA GTCATCACAATATTG TERM 280 203453 - 203431 - g 86 -9.8 -4.11484 | opp_overlap 203433, overlap 203433 TTCAATTCTCCAAAA CATGCGGAGC ATG GCCCCGCATT TAATGAGTTGGATCA TERM 281 203451 - 203433 - g 90 -12.4 -3.6543 | opp_overlap 203433, overlap 203431 CAATTCTCCAAAACA TGCGGAGC ATG GCCCCGCA TTTAATGAGTTGGAT TERM 282 203433 - 203451 + G 84 -10.2 -3.79668 | opp_overlap 203431 203433 CAATTCTCCAAAACA TGCGGAGC ATG GCCCCGCA TTTAATGAGTTGGAT CCA00189 203065 - 204015 + | hypothetical protein rpsL 204212 - 204583 + | 30S ribosomal protein S12 rpsG 204627 - 205100 + | 30S ribosomal protein S7 fusA 205142 - 207226 + | elongation factor G rpsJ 207234 - 207551 + | 30S ribosomal protein S10 TERM 283 208475 - 208463 - g 75 -7.7 -4.09187 | AGAAAAGAAAGAGAA CTCGT TTT ACGAG CATGCGAAGAGGGAG CCA00194 207563 - 208618 + | oxidoreductase ispF 209145 - 208615 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CCA00196 209465 - 209917 + | hypothetical protein TERM 284 210168 - 210148 - f 76 -9.9 -2.81291 | opp_overlap 210148, overlap 210147 TTTATAATTTCAAAG TTTGCTAAA GTA TTTAGCAAA TCTATTGAGTCCTAA TERM 285 210148 - 210168 + F 77 -9.9 -3.11316 | opp_overlap 210148 210147 TTTATAATTTCAAAG TTTGCTAAA GTA TTTAGCAAA TCTATTGAGTCCTAA rplU 210216 - 210536 + | 50S ribosomal protein L21 rpmA 210564 - 210812 + | 50S ribosomal protein L27 TERM 286 210884 - 210853 - Tf 73 -8.8 -3.16881 | opp_overlap 210853 CATTTATCTTAGGAA GCTCTATTTTTTGC TCAC GCATAAAATGGAGC TTTTCTGTTTTTAAC TERM 287 210853 - 210884 + TF 100 -11 -4.98672 | opp_overlap 210853 CATTTATCTTAGGAA GCTCTATTTTTTGC TCAC GCATAAAATGGAGC TTTTCTGTTTTTAAC TERM 288 211611 - 211624 + GT 71 -5.3 -4.57341 | CACATCAAAATCGTG GTCTA GGAT TAGAC TTTTTAAGACACATT CCA00200 212727 - 211834 - | metal ABC transporter, permease protein obgE 210929 - 211936 + | GTPase ObgE TERM 289 212602 - 212582 - GT 82 -9.7 -3.63922 | overlap 212568 212580 212584 ATCCCTCCTAAAATA GAGTGGGAG ATA CTCCCACTA ATAGAAACGATGCGT TERM 290 212600 - 212584 - GT 93 -12.3 -3.39908 | overlap 212568 212582 212580 CCCTCCTAAAATAGA GTGGGAG ATA CTCCCAC TAATAGAAACGATGC CCA00201 213443 - 212724 - | ABC transporter, ATP-binding protein TERM 291 213262 - 213272 + g 70 -5.4 -4.33165 | AATGTTTTTAGAGTT CCTA GTG TAGG TTTTAATAACTTTAG TERM 292 213378 - 213338 - G 100 -19.3 -2.52623 | opp_overlap 213345, overlap 213345 TGGGGCCTATAATAC CGACAAAGTCTCCTTCATG AAT CATGAAGGAGACTTTATTG ATGATCCAGGGGCTT TERM 293 213345 - 213371 + g 100 -18.2 -4.2704 | opp_overlap 213338 213345 TATAATACCGACAAA GTCTCCTTCATG AAT CATGAAGGAGAC TTTATTGATGATCCA TERM 294 213371 - 213345 - G 100 -18.2 -3.98842 | opp_overlap 213345, overlap 213338 TATAATACCGACAAA GTCTCCTTCATG AAT CATGAAGGAGAC TTTATTGATGATCCA CCA00202 214276 - 213440 - | ABC transporter, periplasmic solute-binding protein TERM 295 214633 - 214653 + H 75 -7 -4.13341 | TCCTTTTCTATTTTT TATTCTTG TATAT CAAGAATA TTTGCTTTAATGTGT TERM 296 214784 - 214810 + H 70 -8.2 -3.21822 | overlap 214783 214786 AGTTGTGTTCATTTC TGTTCTTAAAGA TTT TCTTTAGGAATA TGTTAACTTCTTCTC TERM 297 214786 - 214808 + H 73 -8.6 -3.16049 | overlap 214784 214783 TTGTGTTCATTTCTG TTCTTAAAGA TTT TCTTTAGGAA TATGTTAACTTCTTC thiE 214863 - 215501 + | thiamine-phosphate pyrophosphorylase TERM 298 215925 - 215895 - g 74 -4.8 -4.83169 | gap 1, overlap 215897 ATCTTTCTATAAAAA CACGTGGTG-TAG ATTCTG CTAACACCACGCA TGATGCTAAAGAAAC TERM 299 215923 - 215897 - g 73 -7.4 -4.03995 | gap 1, overlap 215895 CTTTCTATAAAAACA CGTGGTG-TAG ATTCTG CTAACACCACG CATGATGCTAAAGAA thiM 215495 - 216283 + | hydroxyethylthiazole kinase TERM 300 216329 - 216377 + T 95 -13.6 -3.48395 | gap 1, opp_overlap 216345 216352, overlap 216330 ATTCTCGTTCTATCT TTAGTTTTGTAATTG-AGAACCT ATGT AGGTTCTACAATTACAAAACAAG TTATCTAGAACAAAT TERM 301 216330 - 216376 + T 95 -14.9 -2.68823 | gap 1, opp_overlap 216345 216352, overlap 216329 TTCTCGTTCTATCTT TAGTTTTGTAATTG-AGAACCT ATGT AGGTTCTACAATTACAAAACAA GTTATCTAGAACAAA CCA00205 221796 - 216409 - | polymorphic outer membrane protein B/C family protein/autotransporter, putative TERM 302 217580 - 217597 + g 71 -6.3 -4.25283 | AACTCAATTTGACGA TCTTGAC CTAA GTCAGGA TTTTGGTAGAAGACT TERM 303 218232 - 218222 - G 84 -6.8 -4.95155 | opp_overlap 218222, overlap 218216 GCTATACTACAAAAA GACG TGG CGTC TTGCTGTGCTGTAGG TERM 304 218748 - 218768 + g 72 -9.7 -3.01422 | opp_overlap 218744, overlap 218745 TTCCTGCAATAGCCC CACCAAAGG TTC CCTTTGGAG TGATTTGTAGAGCTG TERM 305 219813 - 219837 + g 83 -9.5 -3.85698 | opp_overlap 219813 219812 TTATCAAACAAAAGC TCTCTAAATTT GAT AAGTTTAGAGA TTTCTCCGCAGCGAG TERM 306 220673 - 220692 + g 77 -4.9 -4.88217 | overlap 220688 CTGGAAACTTTAGGA GCCGCTG GCGTTG CAGCAGC TTTTGCTTTTTTCGT TERM 307 220688 - 220698 + g 79 -3.2 -5.4148 | overlap 220673 GCCGCTGGCGTTGCA GCAG CTT TTGC TTTTTTCGTTGTTTC TERM 308 221783 - 221772 - G 75 -5.8 -4.7373 | opp_overlap 221777 GCACGGCAGCAAAAA CAGC TGTA GCTG ATAGCCACTTCATAG CCA00206 224801 - 221997 - | polymorphic outer membrane protein A family protein/autotransporter, putative TERM 309 224264 - 224252 - G 70 -3.3 -4.87892 | overlap 224254 TCTTAATAAAAGAAA TAGCG CCA CGCTG CTCACTAAATCTCAT TERM 310 224401 - 224412 + g 70 -5.8 -4.34789 | GAGGTAAACACTCCT CCAG AACT CTGG TTATTTTCTACGTTG CCA00207 225326 - 225024 - | hypothetical protein CCA00208 225704 - 225351 - | hypothetical protein TERM 311 225826 - 225845 + r 85 -12.2 -3.02364 | opp_overlap 225826 CTATAAAAAAGAAAA TCCCCAAC AGGC GTTGGGGA TATGTGCTTGATAAT TERM 312 225845 - 225826 - R 100 -12.2 -5.49579 | opp_overlap 225826 CTATAAAAAAGAAAA TCCCCAAC AGGC GTTGGGGA TATGTGCTTGATAAT CCA00209 227258 - 225903 - | sodium/alanine symporter family protein lspA 227826 - 227329 - | lipoprotein signal peptidase TERM 313 227721 - 227685 - G 77 -9.6 -3.51847 | gap 1, overlap 227683 AAATACAAAAAATTA GCTTACCCCA-ACTATA CTGG TATAGTATGGGGCGAGC GTCGGGTAAATTCCC CCA00211 228206 - 227832 - | transcriptional regulator, putative TERM 314 228125 - 228164 + g 79 -8.9 -3.8323 | gap 1, overlap 228134 CTTCTTGAGCGTTCC CTTCTAGGGTATGAGATA GCTTA TATTTCAT-CTCTAGAAG TCTTTGTTTAAAATT CCA00212 228695 - 228237 - | transcriptional regulator NrdR TERM 315 228758 - 228778 + H 91 -4.7 -5.88471 | opp_overlap 228760, overlap 228760 AACGCAGGATAAATC TATGCGACT ATA AGTTGCAAA TTTTTTTTCCTAATC ribE 228915 - 229520 + | riboflavin synthase subunit alpha TERM 316 229969 - 229959 - g 82 -4 -5.40474 | opp_overlap 229959, overlap 229960 ATGGGCGCAAAAAAA TGTT GCG AACA ACGCTTTGTCTGAAA CCA00214 229522 - 230346 + | hypothetical protein CCA00215 230334 - 231131 + | spoU rRNA methylase family protein TERM 317 231511 - 231529 + G 77 -6 -4.63486 | overlap 231501 231513 GTTCTCCTGCATTGC AAGCTTTC GTC GAAAGCTA TTTTGTTCAGCCCCT TERM 318 231513 - 231527 + G 77 -8.6 -3.93367 | overlap 231511 TCTCCTGCATTGCAA GCTTTC GTC GAAAGC TATTTTGTTCAGCCC lpxK 231383 - 232486 + | tetraacyldisaccharide 4'-kinase TERM 319 233027 - 233013 - g 72 -8.6 -3.5394 | opp_overlap 233022 233022 233025 AAAGTTTTTCTGAAA TCATGC TCC GCATGA TCAACATGATCATGG TERM 320 233022 - 233043 + G 71 -6.7 -4.10657 | gap 1, opp_overlap 233013, overlap 233022 233025 233042 CTGAAATCATGCTCC G-CATGATCA ACA TGATCATGGC TTTTGCACCCTATGG CCA00217 232490 - 233737 + | sodium:dicarboxylate symporter family protein TERM 321 234030 - 233999 - g 89 -11.8 -3.67597 | opp_overlap 233999 234002, overlap 234002 TCGGGTATGCAAGAA GAAGTTTTAGAAGA AGCC TCTTCTAAGACTTC TTGTTCTCATTCTCA TERM 322 233999 - 234030 + G 100 -14 -3.91357 | opp_overlap 233999 234002, overlap 234002 TCGGGTATGCAAGAA GAAGTTTTAGAAGA AGCC TCTTCTAAGACTTC TTGTTCTCATTCTCA TERM 323 234027 - 234002 - g 75 -7.7 -3.97307 | opp_overlap 233999 234002, overlap 233999 GGTATGCAAGAAGAA GTTTTAGAAGA AGCC TCTTCTAAGAC TTCTTGTTCTCATTC TERM 324 234002 - 234027 + G 86 -9.9 -4.06611 | opp_overlap 234002 233999, overlap 233999 GGTATGCAAGAAGAA GTTTTAGAAGA AGCC TCTTCTAAGAC TTCTTGTTCTCATTC TERM 325 234245 - 234229 - g 74 -5.1 -4.76802 | opp_overlap 234229 TCCAAAAACAACAAA TGCGAAT GAA AATCGCA TTCCTATGTCTCCAC TERM 326 234843 - 234816 - g 71 -5 -4.62783 | gap 1, opp_overlap 234823 TAGCTATCCGAAAAA TGGTC-TATGTTA CGC TAACATTTGACCA TAGAGTGCTTGACGG CCA00218 233750 - 234922 + | branched-chain alpha-keto acid dehydrogenase subunit E2 CCA00219 234953 - 235942 + | carbohydrate isomerase KpsF/GutQ family protein TERM 327 236255 - 236269 + T 79 -10 -3.21696 | overlap 236253 GTAGCCTTACGGCCC CTGGAG TTT CTCCAG TATCTCTTCTTATGA CCA00220 237121 - 236357 - | hypothetical protein TERM 328 236698 - 236711 + g 71 -5.3 -4.56961 | AGATTTCTTTTTCAA TAGCA AAGC TGCTA TTTTCTGTAGATGTT TERM 329 237049 - 237069 + g 70 -5.4 -4.3467 | TCTGATGCTCTTTTT TGACTCGC ATTAA GCGAATCA TTTTAATATCGAGCT TERM 330 237552 - 237583 + r 88 -7.3 -5.1356 | TTTTATTTGATGTTA GAGGAGAGATTTC TTAATT GATAACTCTCCTC TTTTTCTTAGTCCCA CCA00221 238695 - 237601 - | hypothetical protein TERM 331 237940 - 237954 + g 81 -2.8 -5.69262 | ACCTCGGATATGCCC TATACG TTC CGGATA TTTTTCTTTTTCTAA CCA00222 239138 - 238767 - | hypothetical protein TERM 332 239138 - 239158 + r 72 -2.7 -5.31275 | AGCTTAAAAGCAGCA CAATTTT ACTCCCA AAAATTG TTTTTTGTCATCAGC TERM 333 239177 - 239210 + r 85 -10.5 -3.49076 | gap 1, opp_overlap 239185 TTTGTCATCAGCTTT CCA-TAGAACTCCTTT CTT AAAGGAGTTCTCCTGG TTGATTATAAATTTT TERM 334 239201 - 239185 - R 79 -9.5 -3.48593 | opp_overlap 239177 CAGCTTTCCATAGAA CTCCTTT CTT AAAGGAG TTCTCCTGGTTGATT hemD 239834 - 239193 - | uroporphyrinogen-III synthase TERM 335 241025 - 241057 + G 74 -6.3 -4.3208 | opp_overlap 241031, overlap 241026 241030 241031 TCACTACGACAACGC ATAAAACTCTACGAG GAC CTCGTGGAGGTTTGG TTTTAGCTTCTAAAG TERM 336 241026 - 241056 + G 73 -9.8 -3.18766 | opp_overlap 241031, overlap 241025 241030 241031 CACTACGACAACGCA TAAAACTCTACGAG GAC CTCGTGGAGGTTTG GTTTTAGCTTCTAAA TERM 337 241030 - 241052 + G 82 -8.4 -4.23528 | opp_overlap 241031, overlap 241026 241025 241031 ACGACAACGCATAAA ACTCTACGAG GAC CTCGTGGAGG TTTGGTTTTAGCTTC TERM 338 241051 - 241031 - g 91 -9.7 -4.49337 | opp_overlap 241030 241026 241025 241031 CGACAACGCATAAAA CTCTACGAG GAC CTCGTGGAG GTTTGGTTTTAGCTT TERM 339 241031 - 241051 + G 83 -11.9 -3.13033 | opp_overlap 241031, overlap 241030 241026 241025 CGACAACGCATAAAA CTCTACGAG GAC CTCGTGGAG GTTTGGTTTTAGCTT TERM 340 241611 - 241621 + G 75 -8.2 -3.9712 | overlap 241610 CGCAGACTTATTATC GCGG TTC CCGC TTTATCCTGAAATCG glyA 240163 - 241656 + | serine hydroxymethyltransferase TERM 341 241915 - 241902 - gf 72 -3.1 -5.00895 | opp_overlap 241914 GGGATCAGATAAAAA TGATG ACTT CACCA GTGACTACTGTGGTT clpP-2 241676 - 242251 + | ATP-dependent Clp protease proteolytic subunit TERM 342 242336 - 242371 + GF 100 -14.3 -3.37493 | opp_overlap 242340, overlap 242340 242343 CTCAGCTCTGTGTAA GGAAGAACAAGTAGA TGGATT TTTACTTGTTCTTCC TTCATCTGTTGCCGA TERM 343 242868 - 242888 + GF 93 -13.3 -3.3676 | ACAGCCGCAGCCCTT GTCGTAGCG AAA CGCTACGGC TTATCAAATATTCAA dapF 242220 - 243002 + | diaminopimelate epimerase TERM 344 243764 - 243746 - g 77 -9.6 -3.56568 | overlap 243759 243760 TAATGAGGCTTTAAA TCCTCGTC CTA AACGAGGA CGCCCTCCGAAGCAA CCA00227 243153 - 244142 + | hypothetical protein ubiE 244840 - 244148 - | ubiquinone/menaquinone biosynthesis methyltransferase CCA00229 245597 - 244815 - | hypothetical protein CCA00230 246685 - 245570 - | hypothetical protein CCA00231 246872 - 246651 - | hypothetical protein CCA00232 248765 - 246903 - | hypothetical protein TERM 345 246995 - 246985 - G 70 -5.4 -4.33151 | opp_overlap 246985, overlap 246975 TAGTAGAATGCAAAA GGAA TTT TTCC TTTAGGATCCTTAAG TERM 346 247093 - 247114 + g 82 -6.5 -4.91873 | overlap 247090 GTTTTGATCACTTCC CCGTTGCGG ATAA TCTCAACGG TTTTTAGTTGATCTG TERM 347 247431 - 247407 - G 82 -8.7 -4.24342 | opp_overlap 247414, overlap 247414 GCCTCCAGCAACAAA GCCAAAACGTA GGT TACGTTTTAAC GCTTCTATTAATGTT TERM 348 247424 - 247414 - G 70 -5.4 -4.42851 | opp_overlap 247414, overlap 247407 GCAACAAAGCCAAAA CGTA GGT TACG TTTTAACGCTTCTAT rsbV_1 249176 - 248826 - | anti-anti-sigma factor CCA00234 250404 - 249292 - | CBS domain-containing protein CCA00235 250882 - 250406 - | hypothetical protein TERM 349 250551 - 250580 + g 70 -8.7 -3.34517 | opp_overlap 250564 TAACGAGAGATCTCT TCGTATAGAAGAT CAGA ATCTTCTGCACGA TCTTTCAAAAAACGT CCA00236 251063 - 250902 - | hypothetical protein CCA00237 251242 - 251081 - | hypothetical protein TERM 350 251113 - 251123 + g 79 -5.4 -5.00642 | TAAAAACACTTTCAT TGCT TAC AGCA TTTTTATGTGCCTTA TERM 351 251175 - 251192 + g 81 -5.6 -5.05782 | opp_overlap 251174 TTTGGATGAGTAATT GCGTAA ACTGGC TTACGC TTTTTTGGACTCACT CCA00238 252025 - 251363 - | hypothetical protein TERM 352 252177 - 252190 + r 91 -2.4 -6.22802 | GGTTAATTTTTGTTA GCAT TTTTCC ATGC TTTTTTTTTCTAAAG CCA00239 252783 - 252211 - | DNA-3-methyladenine glycosylase CCA00240 254819 - 252783 - | VacB/Rnb family exoribonuclease TERM 353 253648 - 253674 + g 70 -8.8 -3.28924 | opp_overlap 253655 253658, overlap 253649 253655 AGCGTTTGTCGTGTT TCTATAAGAGCT ACA GGCTCTTGTAGG TTGTCGAGAGCCATA TERM 354 253649 - 253673 + g 72 -10.1 -2.57211 | opp_overlap 253655 253658, overlap 253648 253655 GCGTTTGTCGTGTTT CTATAAGAGCT ACA GGCTCTTGTAG GTTGTCGAGAGCCAT TERM 355 254949 - 254921 - R 100 -9.8 -5.26119 | gap 1 GGGTTAAAAAGAAAA TTCCCTA-TTCTC CGGA GAGAAATAGGGAA TAAAAGATAAGTTTT dnaK 256967 - 254973 - | molecular chaperone DnaK TERM 356 255468 - 255478 + g 72 -3.2 -5.14563 | TAATCCTGAACTTGC TTCG ATG CGGA TTTTTTGCTCACGAC grpE 257561 - 256998 - | heat shock protein GrpE TERM 357 257113 - 257126 + g 88 -8.1 -5.08731 | opp_overlap 257113 AATTCTTCCACGATA GTCCC TTCG GGGAC TTTTGTTGTTTCTTC TERM 358 257466 - 257476 + g 70 -5.4 -4.45068 | overlap 257456 TTTTAGCTCTGCTTT TAGC GTG GCTA TTTCTTGTTGGAGAT hrcA 258718 - 257558 - | heat-inducible transcription repressor TERM 359 258130 - 258118 - G 73 -7.7 -3.90744 | opp_overlap 258118 CTTTTTGTGAAAGAA TCTCC ATG GGAGA TTGCTTACGAACATA proS 260560 - 258827 - | prolyl-tRNA synthetase TERM 360 261051 - 261070 + G 89 -12.2 -3.65199 | opp_overlap 261049 GCCAGTGAGATTATG GCTGTAGG TGTA CCTACAGC TTTACCTCCAACATT TERM 361 261087 - 261100 + G 71 -5.2 -4.63486 | opp_overlap 261087 TTACCTCCAACATTA CCCG AAGCTG CGGG TTTTGTTGAAGAAGT CCA00245 260829 - 262043 + | hypothetical protein CCA00246 262152 - 263093 + | hypothetical protein TERM 362 263249 - 263219 - g 100 -12.7 -4.32046 | opp_overlap 263214 263208 TCCCGAAAAAGGAAA GGCTAACGAAGCA GTGAT TGCTTTGTTAGCC AAAACTTTATCTCTT CCA00247 263097 - 263375 + | hypothetical protein CCA00248 264415 - 263372 - | hypothetical protein TERM 363 263986 - 264014 + g 70 -3.2 -5.00234 | AACAACATTGGTTGA TATCTAGGGTAT CGTTA ACACCATAGATA TTTGTTTGTTTTTTC CCA00249 265608 - 264421 - | L,L-diaminopimelate aminotransferase TERM 364 264762 - 264740 - G 80 -7.7 -4.4448 | opp_overlap 264743, overlap 264753 264754 AAATTTGGAAATAAA GAAGCCCCA GTAAT TGCGGCTTC TTGAACGGGTAAAGA TERM 365 265458 - 265473 + g 75 -10.4 -3.12606 | TAAAGGTGTCCATGA CCGCTG TGTG CAGCGG TTGGGTCGTATCTCC TERM 366 265955 - 265943 - g 77 -6.3 -4.52143 | overlap 265948 CCTAAAGACAATAAA GAAGA TCC TCTTC GCGGCGTAGGGGAAG CCA00250 265877 - 266767 + | hypothetical protein TERM 367 266829 - 266808 - f 77 -8.7 -3.64716 | opp_overlap 266808, overlap 266806 TCATTTTGTAAAACA GCTGCATCT TAAA AGATGCGGC TTTTTTTATATAAAA TERM 368 266808 - 266829 + F 100 -10.9 -5.71712 | opp_overlap 266808 266806 TCATTTTGTAAAACA GCTGCATCT TAAA AGATGCGGC TTTTTTTATATAAAA TERM 369 266878 - 266846 - f 100 -12.2 -4.96848 | gap 1 TTTTTTATATAAAAA TCCCACCCAGTTCAC TGGA GT-AACTGGATGGGA AAGGGAAAGTTTTCT CCA00251 266873 - 266971 + | hypothetical protein CCA00252 267287 - 268528 + | hypothetical protein CCA00253 270614 - 268530 - | hypothetical protein TERM 370 269239 - 269264 + g 77 -9.9 -3.57119 | gap 1 CCTGTATTTTCCCCA CGACGTTTTACA TAT TGTAAAACG-CG TTTAGAGACTCTATC TERM 371 269543 - 269561 + g 78 -3.8 -5.34555 | overlap 269546 CTATGTATTCTTGAA GATTCTCA GGC TGGGATTC TTTTTTATCGTATAG TERM 372 270497 - 270481 - G 73 -5.8 -4.56914 | TTAGGTAAATGAAAA CCCAAG AAGTA CTCGGG GATATTTAGTATTTC TERM 373 270707 - 270688 - H 72 -5 -4.65078 | AGATTTTTAAGAAAA CGGAAAGA AGCG TCTTTGCG ATTGAGAATTATTTT TERM 374 270896 - 270910 + G 75 -10 -3.00498 | opp_overlap 270886 270896 CGAAATCCTGAGAAA CTCGCA GAA TGCGAG TATGTATGCGATGTC TERM 375 270910 - 270896 - g 84 -10 -3.91072 | opp_overlap 270896, overlap 270886 CGAAATCCTGAGAAA CTCGCA GAA TGCGAG TATGTATGCGATGTC CCA00254 270755 - 271633 + | hypothetical protein CCA00255 271630 - 271962 + | HIT family protein TERM 376 272595 - 272565 - g 72 -9.6 -3.07113 | overlap 272574 GAGGAGCGTAGGGAA GCGTGGAAAGCCTC TTT GATGCTTACCCCGC AACTGCTCACAGGAT TERM 377 272813 - 272793 - g 73 -6.8 -4.2528 | TGTGAATCTAAGAAA GTGGCGGA TCAGG TGCGCCAC ATCGCACAAACATCA TERM 378 273571 - 273600 + G 88 -8.5 -4.76213 | gap 1, opp_overlap 273571 GCTGCTATCACGAAA CCCCTTCG-CTACG TTG CGCAGCCGCAGGGG TTTTATTCGCTTTAT TERM 379 273600 - 273571 - g 83 -10.7 -3.78775 | gap 1, opp_overlap 273571 GCTGCTATCACGAAA CCCCTTC-GCTACG TTG CGCAGCCGCAGGGG TTTTATTCGCTTTAT CCA00256 271986 - 273623 + | hypothetical protein CCA00257 273875 - 273612 - | hypothetical protein TERM 380 274417 - 274437 + G 79 -11.2 -2.73474 | overlap 274416 GTGGGGTCTTACTTG GTGCTGCT GAGGA AGCAGCAC GTTATGGTTATGCGG TERM 381 274677 - 274698 + G 72 -3.1 -5.09225 | gap 1, overlap 274678 274679 TTCAACGTTTTGCCC TA-TGGTAAG TAC CTTACCGCTA TTTTTTGGATAACGT TERM 382 275230 - 275242 + G 71 -6.3 -4.1958 | TCCCTCAGATATCTT CGATA AAC TATCG TTATTTGATTTGTAT CCA00258 274233 - 275567 + | sodium/pantothenate symporter, putative TERM 383 275619 - 275657 + T 72 -9.1 -2.64705 | gap 1, opp_overlap 275626, overlap 275618 275620 CCATAGATATTCTCT GA-ATTCACCTTCTTGTT AGAA AACAAGAAGGTGAGGGTC GTTAATTAAGTTATC TERM 384 275649 - 275626 - T 86 -12.6 -2.52676 | opp_overlap 275620 275619 275618 TATTCTCTGAATTCA CCTTCTTGTT AGAA AACAAGAAGG TGAGGGTCGTTAATT CCA00259 275862 - 275668 - | hypothetical protein TERM 385 275942 - 275967 + r 100 -10.7 -5.04222 | opp_overlap 275944 275948 AACAAAACTTTTCAA TACAAATCTTT TTAA AAAGATTTGTA TTTTTAATTTAATTA TERM 386 275965 - 275944 - R 71 -8.9 -3.06009 | opp_overlap 275942, overlap 275948 CAAAACTTTTCAATA CAAATCTTT TTAA AAAGATTTG TATTTTTAATTTAAT aroG 276925 - 276074 - | 3-deoxy-7-phosphoheptulonate synthase TERM 387 276520 - 276536 + g 71 -9.5 -2.80512 | overlap 276519 276517 GACTAGCTTCCTGAA GCAAAAC AAA GTTTTGC ATATTTCTTGCCCCT CCA00261 280075 - 276941 - | hypothetical protein TERM 388 278273 - 278287 + g 93 -10 -4.8622 | opp_overlap 278275 TAGGGCAACCTCAAT CAGGCT GCC AGCCTG TTTTTGCTTCCAGGA artJ 280211 - 280990 + | amino acid ABC transporter, periplasmic amino acid-binding protein TERM 389 281003 - 281036 + F 71 -7.6 -3.58552 | opp_overlap 281006 281012, overlap 280994 280995 281006 281009 TAACATTTCTTTTAT TAAGAAGAATCTTC CTATTA GAAGATACTTCTTG TCTATTTTTGCATTT TERM 390 281006 - 281033 + F 70 -7.1 -3.89448 | opp_overlap 281006 281012, overlap 280994 280995 281003 281009 CATTTCTTTTATTAA GAAGAATCTTC CTATTA GAAGATACTTC TTGTCTATTTTTGCA CCA00263 281198 - 281902 + | hypothetical protein TERM 391 282084 - 282116 + G 77 -4.9 -4.92757 | overlap 282110 GATCCGGCGTTTGCG TTCTTCCGTGCTTAT TGC ATGGGCAGGAAAGAA TTTTCTTATTGATGC CCA00264 281935 - 282768 + | metal-dependent hydrolase, putative TERM 392 282821 - 282833 + G 81 -5.5 -5.1244 | overlap 282831 AGAGTCGAGAGAGTG CGCTA GGA TGGCG TTTTTCTCTTCCTCG CCA00265 282778 - 284154 + | GTP-binding protein HflX, putative TERM 393 285354 - 285340 - g 70 -5.6 -4.41616 | ATGTTGCCAAAGAAA TCGCCC GTA GGGAGA TGGCACAGCGTATAG CCA00266 284277 - 285542 + | MiaB-like tRNA modifying enzyme TERM 394 285606 - 285628 + G 91 -12.1 -3.80858 | TTATGCCTATTCCAG GATCTGAGC TTTAT GCTCAGATC TTTCCTACATTATGG TERM 395 286506 - 286542 + G 73 -5.4 -4.4891 | gap 1, opp_overlap 286499 286506 286509, overlap 286509 AGATAAAAGCAGGAA CTA-CGTATTTATGGGA TTGT TTCCATAAATAAGATAG TTTTCTGATGGTCGA CCA00267 285539 - 286537 + | hypothetical protein TERM 396 287596 - 287628 + G 73 -8.6 -3.65827 | gap 1, opp_overlap 287620 ATCTTTTGATGGAGA GGCTCTTTATGAGTC TGTA GAC-CATAAAGACCC TTTACATCCCCATTG glgB 286550 - 288709 + | glycogen branching enzyme TERM 397 289739 - 289729 - g 71 -4 -5.00616 | TCCGGGGTTAAAAAA CATT CGT AATG AAGATATTGCAGCAA CCA00269 288857 - 290617 + | hypothetical protein TERM 398 292385 - 292356 - g 73 -8.5 -3.73224 | opp_overlap 292361 GGATTCCTTATGAAA GTGATGGTGGGGA TACA CCCCCACCTTTAC CGGGAAATCATCCTA TERM 399 292361 - 292380 + G 82 -10.7 -3.53444 | opp_overlap 292356 CCTTATGAAAGTGAT GGTGGGG ATACAC CCCCACC TTTACCGGGAAATCA TERM 400 292592 - 292608 + G 83 -9.4 -3.80625 | ACACCTCCGCCTTTA CCGGGA AATCA TCCCGG TTTAGATTCTACAGA TERM 401 292918 - 292936 + G 77 -9.6 -3.59087 | TCTATCAGGATCTGC TCTTGGAG TGA CTCCAGGA TTTGGAAATGGTGTT CCA00270 290822 - 293167 + | hypothetical protein TERM 402 293177 - 293204 + T 100 -13 -4.65263 | opp_overlap 293180 CAATAAGATGTTAAT TAAGGCTATAAA TCTC TTTATAGCCTTA TTTCTTTTAAAAGGT TERM 403 293201 - 293180 - T 85 -10.3 -3.37499 | opp_overlap 293177 TAAGATGTTAATTAA GGCTATAAA TCTC TTTATAGCC TTATTTCTTTTAAAA CCA00271 296021 - 293211 - | polymorphic outer membrane protein E/F family protein/autotransporter, putative TERM 404 293381 - 293398 + g 70 -8.5 -3.3785 | ATGAGTGCCAAGTTC CACTACT TGCC AGTAGTG TTGTCGCTACCTTAG TERM 405 294900 - 294918 + g 86 -9.6 -4.06491 | TTTTAAAGTTGTTCC TGCTGTGC AAT GCATAGCA TTTCTATACAATTGG TERM 406 295013 - 295031 + g 79 -8.8 -3.97659 | opp_overlap 295016 AGCCATTATTTTTAA TGAGGAGG GCG CCTCCCCA TTTACTTCGGTTATT TERM 407 295836 - 295846 + g 71 -6.8 -4.06582 | TGTTGAACGTGTAAG CCCT TCA AGGG TGTTTTGTTCTTCAA CCA00272 298869 - 296044 - | polymorphic outer membrane protein E/F family protein/autotransporter, putative TERM 408 298867 - 298857 - G 70 -5.4 -4.31433 | TACTGGGATAACAAA GATC TGA GATC ACACTAGCTGCCCCT CCA00273 301825 - 299033 - | polymorphic outer membrane protein E/F family protein/autotransporter, putative TERM 409 300928 - 300956 + g 72 -8.9 -3.29829 | opp_overlap 300930, overlap 300931 300955 ATACCGCGCCTTTAA TAGCTCCTCCTCG ATA TGAGGAAGAGTTA TTGTGGAACGATATG TERM 410 300931 - 300953 + g 77 -8.4 -3.79113 | opp_overlap 300930, overlap 300928 CCGCGCCTTTAATAG CTCCTCCTCG ATA TGAGGAAGAG TTATTGTGGAACGAT TERM 411 301291 - 301313 + g 71 -7.6 -3.86524 | CTCCTGACATGATCG CGCCACCTTT TGA ATAGGCGGCG TTTCTAAGGAAATAT CCA00274 304635 - 301852 - | polymorphic outer membrane protein E/F family protein/autotransporter, putative TERM 412 302179 - 302166 - G 71 -6.7 -4.06491 | GCAAGGTGAGAGAAA CCAAC GGAT GTTGG TTAGAGAATTTTCTA TERM 413 304745 - 304768 + r 100 -11.2 -4.16279 | opp_overlap 304745 GTGATAAATGAAAAA GGTTTGTTTT GAAT AAAACAAACC TTTTAGGGTGATGTA TERM 414 304768 - 304745 - R 100 -11.2 -5.04601 | opp_overlap 304745 GTGATAAATGAAAAA GGTTTGTTTT GAAT AAAACAAACC TTTTAGGGTGATGTA CCA00275 305981 - 304845 - | polymorphic outer membrane protein E/F family protein, putative CCA00276 306052 - 306147 + | hypothetical protein TERM 415 306371 - 306332 - T 95 -3.7 -6.17268 | overlap 306334 GGAGAAGAAAAAAAA GAGAGAGAAATTTCCCT AGGGCA AAGAAAATTTCTCTCAA CAGGCGTTTAAAATC TERM 416 306369 - 306334 - T 100 -10.7 -4.71468 | overlap 306332 AGAAGAAAAAAAAGA GAGAGAAATTTCCCT AGGGCA AAGAAAATTTCTCTC AACAGGCGTTTAAAA CCA00277 309324 - 306379 - | polymorphic outer membrane protein H family protein TERM 417 306528 - 306542 + g 87 -6.4 -5.33866 | overlap 306539 GACGAGGGATTTGTG CTCCTG TGA TAGGAG TTTTTTCTCCGTTTG TERM 418 306755 - 306745 - G 76 -6.8 -4.37092 | ACCTTGTTCAGAAAA GGCA TTT TGCC ATCCACCCATAAACT TERM 419 309329 - 309318 - G 70 -5.8 -4.4572 | AAGATCTTAAAGAAA GAGG CATG CCTC AACCCTATCGTTAGT CCA00278 312385 - 309350 - | polymorphic outer membrane protein G family protein/autotransporter TERM 420 309684 - 309697 + g 73 -2.3 -5.27335 | opp_overlap 309675 GAAGAACAGAAGGAG CGTGC TTCT GCAAG TTTTTCTTTAAACGA TERM 421 310285 - 310305 + g 79 -5.5 -4.89852 | AAGATGCTTGACGCT CAGGATT AGGAGTG AATCCTG TTTTTGTCCATGTAG TERM 422 310714 - 310728 + g 80 -10 -3.73953 | CGCCTCCGCCACCCC CACCAG CTG CTGGTG TTTGATGGGAATGCT TERM 423 312606 - 312555 - R 77 -9.2 -3.31184 | gap 1, opp_overlap 312565, overlap 312556 312565 312590 ATAGGACAATCAAGA CTCGAAGAAATTCAGAAATTTTTTT TTA AAAATATTTTCTGAATTTCTT-AAG AAAGCCATGTTTTTT TERM 424 312597 - 312565 - R 71 -6.5 -4.20749 | opp_overlap 312565, overlap 312555 312556 312590 CAAGACTCGAAGAAA TTCAGAAATTTTTTT TTA AAAATATTTTCTGAA TTTCTTAAGAAAGCC TERM 425 312565 - 312597 + r 71 -6.5 -4.15044 | opp_overlap 312565 312555 312556 312590 CAAGACTCGAAGAAA TTCAGAAATTTTTTT TTA AAAATATTTTCTGAA TTTCTTAAGAAAGCC CCA00279 315240 - 312634 - | polymorphic outer membrane protein G family protein TERM 426 314294 - 314268 - G 83 -9.5 -3.85817 | opp_overlap 314260 314262, overlap 314254 AGTCTTTCGCAGAAA GGACAACGC TGCCTTTAT GCGTTGTCC CATCGGTAAGTTGGT TERM 427 315481 - 315494 + r 72 -9.5 -2.73875 | TGAGGAGGCGTGTTT GGGGG AAGT CCCCC TGCTCTTAAAGAGCA CCA00280 318056 - 315525 - | polymorphic outer membrane protein G family protein/autotransporter, putative TERM 428 316645 - 316671 + g 75 -5.8 -4.7254 | overlap 316646 TCTATGGACCATTTC CCTTGGTACCCA CTA TGGGAATCAAGA TTTTTCCTAACCGCT TERM 429 316646 - 316670 + g 72 -9.3 -3.43042 | overlap 316645 CTATGGACCATTTCC CTTGGTACCCA CTA TGGGAATCAAG ATTTTTCCTAACCGC TERM 430 318151 - 318093 - R 85 -12.1 -3.13308 | gap 2, opp_overlap 318083 318095, overlap 318092 TATAGGAAAAAATAT TTTCTGCTTTTTAGGAGTGGGCATAACCT TAA AGGTTATGCCTACT-CGAAAAAGCAGAT- AGGTTCGGTATCCCA TERM 431 318095 - 318150 + r 100 -23.8 -2.56095 | gap 1, opp_overlap 318092 318093, overlap 318083 TAGGAAAAAATATTT TCTGCTTTTTAGGAGTGGGCATAACCT TAA AGGTTATGCCTACT-CGAAAAAGCAGA TAGGTTCGGTATCCC TERM 432 318177 - 318207 + r 74 -9.1 -3.04144 | gap 1 TCCCAGGGTGCTTAT GCGTAAGCTCCCTG CAAG CAGGGAG-TTACAC TGTTAAAAATGCACC CCA00281 320741 - 318210 - | polymorphic outer membrane protein G family protein/autotransporter, putative TERM 433 319360 - 319339 - G 77 -10.1 -3.31461 | opp_overlap 319339 CATTTACCTTGATAA CCGCGATGG GTTT CCATCGTGG TTATCGGGATTAGAG TERM 434 319339 - 319360 + g 87 -12.3 -3.33261 | opp_overlap 319339 CATTTACCTTGATAA CCGCGATGG GTTT CCATCGTGG TTATCGGGATTAGAG TERM 435 320306 - 320331 + g 100 -13.5 -3.93985 | opp_overlap 320303 TTTGCTGAATCAGCA TGGAGCTATTT GAAT AAATAGCTCCA TTTCCTATGTCTTCT TERM 436 320400 - 320366 - G 76 -2.1 -5.4492 | opp_overlap 320371, overlap 320369 GAGACATATAAAAAA TCAGACTCAGACATC CCGAT AATGTCAGGGTCTTA GCATCTGCTGTGGTG TERM 437 320809 - 320799 - R 77 -5.4 -4.84219 | opp_overlap 320795 320793 320799 AAATCAGAAAATAAA GCAA GAG TTGC TGTATATTGATGTAG TERM 438 320843 - 320832 - R 72 -5.8 -4.33182 | opp_overlap 320831, overlap 320838 TGATGTAGAAAATAA GGAG AAGA CTCC CTGTGTAAATTCAGC TERM 439 320866 - 320838 - R 82 -9.7 -3.69319 | gap 1, opp_overlap 320831, overlap 320832 AGAAAATAAGGAGAA GACTCCCTG-TG TAAATT CAGCAGGGAGTC TACAAAAATCTTAGA CCA00282 323705 - 320877 - | polymorphic outer membrane protein G family protein/autotransporter, putative TERM 440 323781 - 323810 + r 72 -9.1 -2.75481 | AAGGGGATTGACAGG GAGCCCCTGCCCC GGAT GGGGCAGGGGAGG TGGTTGGAATTAGAA CCA00283 326420 - 323820 - | polymorphic outer membrane protein G family protein/autotransporter TERM 441 325713 - 325733 + g 70 -2.5 -5.05782 | opp_overlap 325704, overlap 325715 AGAGAATAGGGTTGG CCCTCCA GAGATGA TGGAGAG TTTTTTCGCATAAAT TERM 442 326534 - 326511 - R 81 -8.1 -4.20868 | opp_overlap 326492, overlap 326494 326512 TTCTGAAAAGAAGAA GCCCTGCTC TGGGAT GAGCAGGGG GGTGCTTGTTAGAAA TERM 443 326533 - 326512 - R 84 -11.6 -3.11798 | opp_overlap 326492, overlap 326511 TCTGAAAAGAAGAAG CCCTGCTC TGGGAT GAGCAGGG GGGTGCTTGTTAGAA CCA00284 329323 - 326543 - | polymorphic outer membrane protein G family protein/autotransporter TERM 444 327948 - 327964 + g 89 -9.5 -4.26019 | AAAATTAGAGAGCCC GCTGTTT GCG AAACAGC TTTTGCCTCTACTTC TERM 445 328610 - 328582 - G 79 -11.1 -3.14132 | opp_overlap 328568 328582, overlap 328600 CTGTTGTTCCAGTAA CAGCATTGTTGTT AAA AACAACAGCGCTG TTTCCTGCAATAGTC TERM 446 328582 - 328610 + g 83 -11.1 -3.75169 | opp_overlap 328582 328600, overlap 328568 CTGTTGTTCCAGTAA CAGCATTGTTGTT AAA AACAACAGCGCTG TTTCCTGCAATAGTC TERM 447 332650 - 332665 + r 81 -7.6 -4.39828 | opp_overlap 332649 TGAATCTGAAGAATC TCCTGA ACCA TCAGGA TTTTCTGGAGGTGTT TERM 448 333855 - 333884 + r 86 -12.3 -2.56747 | opp_overlap 333860, overlap 333860 GGGAAACAAAAATAC AAAAAGCCACATG AAAT CATGTGGCTTTTG ATGTTCTCGTCGATA TERM 449 333860 - 333879 + r 100 -12.2 -4.47259 | opp_overlap 333860, overlap 333855 ACAAAAATACAAAAA GCCACATG AAAT CATGTGGC TTTTGATGTTCTCGT TERM 450 333879 - 333860 - R 100 -12.2 -5.38398 | opp_overlap 333855 333860 ACAAAAATACAAAAA GCCACATG AAAT CATGTGGC TTTTGATGTTCTCGT CCA00286 334233 - 333958 - | hypothetical protein gatC 334432 - 334734 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 451 337324 - 337341 + G 72 -9.9 -3.06837 | opp_overlap 337324 337323, overlap 337323 AGGACGTTGTAAAAC GCAAGGT AAGA ACCTTGC CTTTTCAGGGATTCT TERM 452 337341 - 337324 - g 72 -9.9 -3.05775 | opp_overlap 337323 337324, overlap 337323 AGGACGTTGTAAAAC GCAAGGT AAGA ACCTTGC CTTTTCAGGGATTCT gatB 336230 - 337693 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 453 337783 - 337748 - T 100 -12 -5.16572 | opp_overlap 337749, overlap 337749 337772 ATCTAAGGGAAAAAA TGGCTCTTTTGAAGTT GAAA AACATCAAAAGAGCCT TTTTATTTCTATCTA TERM 454 337749 - 337782 + T 100 -15.5 -5.4433 | opp_overlap 337749 337748 337772 TCTAAGGGAAAAAAT GGCTCTTTTGAAGTT GAAA AACATCAAAAGAGCC TTTTTATTTCTATCT TERM 455 337782 - 337749 - T 100 -15.5 -3.68859 | opp_overlap 337749, overlap 337748 337772 TCTAAGGGAAAAAAT GGCTCTTTTGAAGTT GAAA AACATCAAAAGAGCC TTTTTATTTCTATCT TERM 456 337813 - 337829 + T 100 -9.5 -4.81843 | AGATTTCTTTTAGAG GAAAAGC CTA GCTTTTC TTTCTTTTCCTTCTT CCA00290 338965 - 337820 - | hypothetical protein CCA00291 339764 - 339246 - | hypothetical protein CCA00292 340842 - 339892 - | hypothetical protein rnhC 341969 - 341067 - | ribonuclease HIII TERM 457 341316 - 341331 + g 76 -3.2 -5.1963 | opp_overlap 341318, overlap 341318 ACGTACTTTTTGAAT GACCGA AATA TCGGTA TTTTTCTTCCTTAAA TERM 458 341376 - 341360 - G 71 -6.5 -4.25848 | opp_overlap 341347, overlap 341347 AAGCGTTGAGTAAAA CGCTTTC TGA GGAAGCG AATTGATCGGAAATA TERM 459 342160 - 342145 - RH 71 -7.6 -3.68726 | AAGACCTGAACATAA GGAGAA ATTT TTCTCC CAGGTTGAGGTTGGG CCA00294 342249 - 342124 - | hypothetical protein CCA00295 342232 - 342663 + | hypothetical protein TERM 460 342682 - 342711 + Tr 91 -13.1 -3.26546 | gap 1 TAACCCGAGATGCAT GTAGAGAAGG-CAA AGC TTGACCTTCTCTAC TTCCTAAGTTTCTCG CCA00296 344079 - 342733 - | hypothetical protein TERM 461 342963 - 342977 + g 79 -5.6 -4.93877 | GAATATCAGGGTCTA GAGGGC GAG GACCTC TTTTCTTTGGTCCAA CCA00297 345705 - 344368 - | hypothetical protein CCA00298 347629 - 346028 - | hypothetical protein TERM 462 347970 - 347989 + H 78 -2.2 -5.61689 | opp_overlap 347983, overlap 347974 347983 GGGGAAGTTTTTTGA GATTTTTT ATGA ATAAAATC TTTTTTATTGATTTT CCA00299 348049 - 348915 + | hypothetical protein TERM 463 348933 - 348980 + F 100 -8.5 -5.88476 | gap 1, opp_overlap 348935, overlap 348934 348935 TTATTTATCCGAAAC AAGCCTTACAGCATCCTCTCTG TCCCC CTGAGAGGATGCT-TAGGGCCC TTTTTTATTTCTTTT TERM 464 348934 - 348979 + F 95 -12 -4.07595 | gap 1, opp_overlap 348935, overlap 348933 348935 TATTTATCCGAAACA AGCCTTACAGCATCCTCTCTG TCCCC CTGAGAGGATGCT-TAGGGCC CTTTTTTATTTCTTT TERM 465 348935 - 348978 + F 100 -15.5 -3.00897 | gap 1, opp_overlap 348935, overlap 348934 348933 ATTTATCCGAAACAA GCCTTACAGCATCCTCTCTG TCCCC CTGAGAGGATGCT-TAGGGC CCTTTTTTATTTCTT TERM 466 348978 - 348935 - f 100 -13.3 -3.94188 | gap 1, opp_overlap 348935 348934 348933 ATTTATCCGAAACAA GCCTTACAGCATCCTCTCTG TCCCC CTGAGAGGATGCT-TAGGGC CCTTTTTTATTTCTT CCA00300 349093 - 349911 + | hypothetical protein TERM 467 352305 - 352291 - g 77 -10 -3.2827 | opp_overlap 352290 352293, overlap 352284 352294 TTAGCTAACGATCAA GATCGC GAA GCGATC CTATCCTGCTTCGCG TERM 468 352309 - 352323 + G 77 -7.8 -4.24413 | opp_overlap 352294, overlap 352307 CGCGAAGCGATCCTA TCCTGC TTC GCGGGA TTATTTCTTCCTCAA CCA00301 350419 - 352521 + | hypothetical protein CCA00302 352633 - 353715 + | hypothetical protein ksgA 353724 - 354560 + | dimethyladenosine transferase dxs 356939 - 355005 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 469 356748 - 356727 - G 71 -3.7 -4.94262 | overlap 356728 356731 GACATCAAAAATAAA CTTATCCTC AGTA GAGGAAAAA ACATAATGCAAAGCT CCA00305 357187 - 356936 - | hypothetical protein TERM 470 357159 - 357147 - G 72 -3.4 -5.02074 | overlap 357149 TGATTTTGTAAAAAA CTCA GCTTT TGAG CTAGGGAATCCAAAT xseB 357429 - 357202 - | exodeoxyribonuclease VII small subunit xseA 359100 - 357433 - | exodeoxyribonuclease VII large subunit TERM 471 357629 - 357656 + g 71 -5 -4.58663 | gap 1 AGGGTAAGTTGCTTA GAAACC-TGAGAA TAT TTTTCGCGGTTTC TTTTTACAAGGTGGT TERM 472 358732 - 358749 + g 75 -2.6 -5.27399 | opp_overlap 358732, overlap 358734 CTCTATAGCAAAATA CCCCTC AGCAGC GAGGCG TTTTTTCGTCTCTTC tpiA 359233 - 359997 + | triosephosphate isomerase TERM 473 360563 - 360533 - g 85 -6.8 -5.09895 | CATTTAGGGAAAAAA GCTCAAGAGCTGCC TAC GAAAGCTCTAGAAC AAGTTGCTCCGGATG secG 360287 - 360601 + | preprotein translocase subunit SecG CCA00310 360659 - 360805 + | hypothetical protein TERM 474 360851 - 360863 + G 71 -6.3 -4.18018 | opp_overlap 360850 360851 AGAGAATTAGAATAT TATGG CAG CCATA TTTTACGTAGAAAGG TERM 475 360927 - 360889 - g 70 -9.7 -2.70215 | opp_overlap 360900, overlap 360897 360900 AAAGGCTGATATAAT TCCTGAAATTACTGACG CGACT CGTCAGTTAGTTCAAGA TATGTATGAAACTAT def 360830 - 361390 + | peptide deformylase CCA00312 363548 - 361452 - | hypothetical protein TERM 476 362717 - 362707 - G 76 -3.2 -5.19879 | overlap 362699 TGCGAAAGAGAAAAA TCCC CAT GGAA ACGATAGCGGTCTCG TERM 477 362737 - 362773 + g 74 -6.5 -4.4261 | overlap 362738 TAGCGGTCTCGAGGT TCTGCCATGTCAATCGC TAA GCGATGGGCATAGTAGC TTTTCATGTTGAAGA TERM 478 362738 - 362772 + g 75 -10 -3.25084 | overlap 362737 AGCGGTCTCGAGGTT CTGCCATGTCAATCGC TAA GCGATGGGCATAGTAG CTTTTCATGTTGAAG CCA00313 365265 - 363559 - | hypothetical protein TERM 479 363965 - 363981 + g 71 -7.3 -3.84304 | opp_overlap 363963, overlap 363964 GCCAAAAAGGTAATC GCTTTAG AAG CTAGAGC TGTTTTCTGACTTAA TERM 480 364267 - 364294 + g 70 -3.4 -4.93696 | opp_overlap 364265 364269, overlap 364269 TAAATGTATCAAAGC TAGCGCAGCA TTTAATTT TGCTTCGCTG TTTTTCGTATTTAAA TERM 481 364480 - 364492 + g 87 -6.3 -5.32882 | TAGATCAGGATCATT TCTCT TTG AGAGA TTTTTTATCGTGGTA TERM 482 364736 - 364725 - G 86 -4.4 -5.47399 | CTAATCTTAAAAAAA TTGC TGTA GCAA GACATTGTATTTCTT maf 365837 - 365247 - | Maf-like protein TERM 483 365858 - 365880 + r 84 -12 -2.95884 | opp_overlap 365856 365855 365864, overlap 365863 CTCAGTAAAACATCT CCCAAACTGC CAC GCAGCTTGGG TCTATAACTTGCTGC CCA00315 367507 - 365882 - | ABC transporter, ATP-binding protein TERM 484 367417 - 367400 - G 81 -11.3 -3.05463 | overlap 367402 ATTTCCTGGATTGAA GACGACG GAAA CGTCGTC GAACAGTACGCGTGT xerC 368462 - 367524 - | site-specific tyrosine recombinase XerC TERM 485 367877 - 367889 + g 76 -3.4 -5.2696 | CATGAGGAGTCATAG GAAC AAGAC GTTC TTTTTTCCCTTTTCC TERM 486 368270 - 368300 + g 85 -8.4 -4.42386 | opp_overlap 368272, overlap 368272 368279 TATCTTTCGTAAATA AAGAGAAAGGAAGC TCT GTTTCTTTTCTCTC TTTTGTAAGTAAGCA TERM 487 368272 - 368298 + g 86 -11 -3.82117 | opp_overlap 368272, overlap 368270 368279 TCTTTCGTAAATAAA GAGAAAGGAAGC TCT GTTTCTTTTCTC TCTTTTGTAAGTAAG TERM 488 368298 - 368272 - G 76 -6.6 -4.41348 | opp_overlap 368272 368270 368279 TCTTTCGTAAATAAA GAGAAAGGAAGC TCT GTTTCTTTTCTC TCTTTTGTAAGTAAG CCA00317 369425 - 368505 - | ribonuclease Z TERM 489 368636 - 368666 + g 72 -9.6 -3.0894 | overlap 368656 CAGAAAAGTGTGTGA GCACGAGCTGCTGG GCT CCAGCAGCCAATGC TTGAGTGGCTGCTTG TERM 490 368656 - 368678 + g 75 -7.7 -3.99315 | overlap 368636 AGCTGCTGGGCTCCA GCAGCCAAT GCTTG AGTGGCTGC TTGTTTCGCTGTCAT CCA00318 370230 - 369529 - | hypothetical protein TERM 491 370355 - 370319 - R 79 -8.1 -3.9461 | opp_overlap 370318 370316 370319 TTTTTCTAAGAAGAA TTTAGAGCCGTTAATTT ATA AAGAAAACGGCTCTAAA CTATATTATAAGAGT TERM 492 370319 - 370355 + r 77 -10.3 -2.50252 | opp_overlap 370319, overlap 370318 370316 TTTTTCTAAGAAGAA TTTAGAGCCGTTAATTT ATA AAGAAAACGGCTCTAAA CTATATTATAAGAGT lon 372826 - 370370 - | ATP-dependent protease La TERM 493 372026 - 372040 + g 73 -5.8 -4.51654 | overlap 372031 372032 GATCGTTTTTAGCTG TTCTTT TAA AAAGAA TTCTTTTTGGCTTTT TERM 494 372523 - 372538 + g 76 -7.6 -4.16943 | opp_overlap 372523 CACCTACGCGATAGA GTTGGT TAAA ACCAAC TTTTAAAATGTCAGC TERM 495 372664 - 372646 - G 70 -8.8 -3.32844 | opp_overlap 372650 GTCCTGATTCTATAA GGATTGGC GCT GCCATTCC TGGGAAAAAGGGGCG CCA00320 372994 - 373128 + | hypothetical protein CCA00321 373479 - 374120 + | hypothetical protein rpsU 374317 - 374493 + | 30S ribosomal protein S21 TERM 496 375668 - 375638 - g 74 -4.8 -4.72556 | opp_overlap 375643 GGAAAAAGCAGAAAA TTTCCCCAAGAAAC GTG GTTTTTTGGATAAA ATAAAGGGTTTTTTT TERM 497 375643 - 375655 + G 72 -3.3 -5.09225 | opp_overlap 375638 AAGCAGAAAATTTCC CCAAG AAA CGTGG TTTTTTGGATAAAAT dnaJ 374523 - 375701 + | dnaJ protein TERM 498 375848 - 375864 + G 73 -8.7 -3.7821 | CCCGACAGAGTGATT CTGGAGG AAC CTTCCAG TTGTCTTGTGCTGGT pdhA/pdhB 375736 - 377772 + | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit CCA00325 378806 - 377769 - | hypothetical protein TERM 499 378948 - 378928 - H 90 -11.2 -3.53343 | opp_overlap 378926 AATTCTTCTTCCAAA GGTCTAGC GTATA GCTAGACC ACATTCTGAATCTCA TERM 500 380795 - 380805 + G 73 -6.8 -4.15044 | CGTTGTGGATTTCAA GGAG GAC CTCC TTTATTGGAAACAGA CCA00327 380447 - 381238 + | hypothetical protein ptsH 381228 - 381566 + | phosphocarrier protein HPr ptsI 381567 - 383267 + | phosphoenolpyruvate-protein phosphotransferase CCA00330 383554 - 383264 - | hypothetical protein dnaZ 384897 - 383557 - | DNA polymerase III subunits gamma and tau CCA00332 385236 - 385361 + | hypothetical protein TERM 501 385760 - 385744 - g 87 -5.1 -5.40072 | overlap 385746 GCTGGTTGAAAAAAA CTCAAGA TTT TCTTGGG GCTGTAGGGTTTATA TERM 502 386176 - 386190 + G 78 -2.8 -5.52384 | TATTTTCTTGTCGTG GAGCTT TCG GAGTTC TTTTTTTAGTCGCCG TERM 503 387277 - 387225 - g 88 -8.5 -4.72497 | opp_overlap 387236 387237 387276, overlap 387226 TATCCAGGAAGAAAA CCCTCCTCTAAAGAATCTACAATTA TTA TGATTGCAGATTCATTTGAGGCGGC GGCACGTTCCTTAGA TERM 504 387276 - 387226 - g 86 -12 -3.42775 | opp_overlap 387236 387237, overlap 387225 ATCCAGGAAGAAAAC CCTCCTCTAAAGAATCTACAATTA TTA TGATTGCAGATTCATTTGAGGCGG CGGCACGTTCCTTAG CCA00333 385392 - 387488 + | hypothetical protein CCA00334 387971 - 387507 - | hypothetical protein TERM 505 388168 - 388206 + r 100 -17.9 -2.90763 | opp_overlap 388162 388172, overlap 388170 388172 TGTATCTAAGTTTGA TACATTAGGAGTATTTT GTTGA AAAATACTCCTAATGTA TATGTCAGGTGTCAC TERM 506 388170 - 388204 + r 100 -16.1 -3.00498 | opp_overlap 388162 388172, overlap 388168 388172 TATCTAAGTTTGATA CATTAGGAGTATTTT GTTGA AAAATACTCCTAATG TATATGTCAGGTGTC TERM 507 388202 - 388172 - R 87 -12.9 -2.89742 | opp_overlap 388172 388170 388168, overlap 388162 TCTAAGTTTGATACA TTAGGAGTATTTT GTTGA AAAATACTCCTAA TGTATATGTCAGGTG TERM 508 388172 - 388202 + r 88 -12.9 -3.05498 | opp_overlap 388162 388172, overlap 388170 388168 TCTAAGTTTGATACA TTAGGAGTATTTT GTTGA AAAATACTCCTAA TGTATATGTCAGGTG CCA00335 388655 - 388218 - | hypothetical protein TERM 509 388690 - 388715 + r 84 -3.9 -5.65678 | overlap 388691 388692 AAAAATTGATTTAAG GTGACCTAAGC TGGT GCTTAGGACGA TTTTTTCTCTTTTAT TERM 510 388691 - 388714 + r 76 -7.4 -3.95747 | overlap 388690 388692 AAAATTGATTTAAGG TGACCTAAGC TGGT GCTTAGGACG ATTTTTTCTCTTTTA TERM 511 388898 - 388883 - R 89 -9 -4.53419 | TACTATAATAAGAAA GGGAGT TAAA ACTCCC ATCCCTCCTAAAACC TERM 512 388975 - 389020 + r 79 -9.9 -3.16689 | opp_overlap 388981, overlap 388973 TTTTCATTCAGGTTT GATAGATTGGGGGGCATTTTT ATTG AAAAATGTCCCCCAATGTAGA TGTTGCTGAGGTTTT TERM 513 389014 - 388981 - R 100 -15.5 -2.87931 | opp_overlap 388975 388973 TTCAGGTTTGATAGA TTGGGGGGCATTTTT ATTG AAAAATGTCCCCCAA TGTAGATGTTGCTGA CCA00336 389488 - 389048 - | hypothetical protein TERM 514 389815 - 389792 - R 84 -11.2 -3.10512 | opp_overlap 389792 389814, overlap 389789 AGGCGCAATAAATTA GGAGTATTTT CTTA AAAATACTCC TCTAATTTAGATGTT TERM 515 389792 - 389815 + r 84 -11.2 -3.03439 | opp_overlap 389792 389789, overlap 389814 AGGCGCAATAAATTA GGAGTATTTT CTTA AAAATACTCC TCTAATTTAGATGTT CCA00337 390294 - 389842 - | hypothetical protein TERM 516 390141 - 390131 - G 70 -5.4 -4.36596 | GGCACAACCAATAAA CCTA TAA TAGG AGTGCAAGAAGCGAT TERM 517 390331 - 390355 + r 80 -2.8 -5.61913 | gap 1, opp_overlap 390331 390332, overlap 390333 390344 AAATTGATTATCAAA TGGCC-TAGGC TTGT GCCTAAGGCGG TTTTTTCTCTTTATT TERM 518 390437 - 390408 - R 93 -9.3 -4.56775 | opp_overlap 390417 ATTTGCTGGGAAAAA GTGAGTAAGCGCA TTTT TGCGTATACTCAC ATAAAAACGCAAATT TERM 519 390588 - 390633 + r 87 -11.6 -3.17797 | gap 1, opp_overlap 390593 390595 TTTTGCATTCAGGCT CA-ATAGATTAGGAGTATTTT CTTAA AAAATACTCCTAATCTAGATG TTGAGTGTATATGGG TERM 520 390627 - 390593 - R 100 -16.8 -3.04461 | opp_overlap 390588, overlap 390595 CATTCAGGCTCAATA GATTAGGAGTATTTTC TTA AAAAATACTCCTAATC TAGATGTTGAGTGTA TERM 521 390625 - 390595 - R 90 -13.6 -3.07895 | opp_overlap 390588, overlap 390593 TTCAGGCTCAATAGA TTAGGAGTATTTTC TTA AAAAATACTCCTAA TCTAGATGTTGAGTG CCA00338 391092 - 390676 - | hypothetical protein TERM 522 391128 - 391152 + r 86 -5 -5.61913 | gap 1, opp_overlap 391128 391129, overlap 391130 AAAATTGATTTCAAA TGGCC-TAGGC TTGT GCCTAAGGCGA TTTTTTCTCTTTATT CCA00339 391631 - 391167 - | hypothetical protein CCA00340 392488 - 391760 - | porphobilinogen deaminase radA 393827 - 392466 - | DNA repair protein RadA TERM 523 392947 - 392984 + gr 73 -8.7 -3.28712 | gap 1, opp_overlap 392954, overlap 392954 GATCCTTCAATAATA GGAATAATTACAG-AACC TGT GGTTTCTGTAATTTTTTC TTGTAGGAAGAGGCC TERM 524 392977 - 392954 - GR 73 -7.6 -3.85878 | gap 1, opp_overlap 392947 392954 CAATAATAGGAATAA TTACAG-AACC TGT GGTTTCTGTAA TTTTTTCTTGTAGGA TERM 525 392954 - 392977 + gr 100 -7.6 -5.55769 | gap 1, opp_overlap 392954, overlap 392947 CAATAATAGGAATAA TTACAG-AACC TGT GGTTTCTGTAA TTTTTTCTTGTAGGA rnc 394506 - 393793 - | ribonuclease III CCA00343 394626 - 395090 + | hypothetical protein TERM 526 396524 - 396514 - g 70 -3.2 -4.98531 | GCTTTAAAGCAAAAA CTCC AAG GGAA AACTCTTCGAGAGGC CCA00344 395188 - 396990 + | phosphoglucomutase/phosphomannomutase family protein sod 397180 - 397797 + | superoxide dismutase accD 397874 - 398800 + | acetyl-CoA carboxylase subunit beta dut 398843 - 399286 + | deoxyuridine 5'-triphosphate nucleotidohydrolase ptsN_1 399288 - 399764 + | PTS system,IIA component CCA00349 399770 - 400450 + | DNA binding protein/PTS system, IIA component TERM 527 401150 - 401128 - g 85 -7.1 -4.92385 | GATAGCGAAACAAAA GCTTCTTCA GAAAA TAAAGAAGC CATTCAAGTTGTTCA CCA00350 400549 - 401805 + | hypothetical protein TERM 528 401867 - 401840 - f 79 -8.5 -3.78775 | opp_overlap 401842, overlap 401842 TGCTCTAGTATGAAA GAGACAGAACC TTAAGG GGTTCTGTCTT TTTTTTTATGTCGAT TERM 529 401865 - 401842 - f 87 -11.1 -3.48024 | opp_overlap 401842, overlap 401840 CTCTAGTATGAAAGA GACAGAACC TTAAGG GGTTCTGTC TTTTTTTTTATGTCG TERM 530 401842 - 401865 + F 100 -11.8 -6.30182 | opp_overlap 401842 401840 CTCTAGTATGAAAGA GACAGAACCT TAAG GGGTTCTGTC TTTTTTTTTATGTCG CCA00351 401993 - 403744 + | hypothetical protein TERM 531 403755 - 403780 + T 77 -3.3 -5.52096 | ACTAACGCATAGAGA GCTCTTCTA CTATTTCT TGGGAGAGC TTTTTTGTTCAATTT CCA00352 404357 - 403764 - | hypothetical protein TERM 532 403991 - 404016 + g 77 -9.9 -3.58343 | TGTTTAAGTCCCGCA TATGCGGAATA AACG TATTCCGTATA TTTCCAAATGCTACG CCA00353 404929 - 404369 - | hypothetical protein TERM 533 405397 - 405417 + G 73 -8.3 -3.67611 | GGGGGAGATTTCCTA GCGACAG GTCATTA CTGTCGC TTATCTTCAGCTGCC TERM 534 406040 - 406053 + G 76 -6.7 -4.46212 | opp_overlap 406031 AGGCAATTACCCCAG GGCAA ACAA TTGCC TTTTATGATGGGGAG trmU 405034 - 406116 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase clpC 408640 - 406100 - | ATP-dependent Clp protease, ATP-binding subunit TERM 535 406191 - 406207 + g 82 -10.9 -3.61398 | opp_overlap 406186 406188 406191 TCTTCAGAAAGACGA GCACGAA GTT TTCGTGC TTCTTGACGACAAGA TERM 536 406207 - 406191 - G 77 -10.9 -2.89797 | opp_overlap 406191, overlap 406186 406188 TCTTCAGAAAGACGA GCACGAA GTT TTCGTGC TTCTTGACGACAAGA TERM 537 408165 - 408153 - G 75 -7.7 -4.03888 | overlap 408150 408159 GATTTAGAAGAAGAA GAGGA ACT TCCTC GAGGATTAGAAGAAG CCA00356 408844 - 409560 + | hypothetical protein CCA00357 409557 - 410981 + | phospholipase D family protein TERM 538 411003 - 411031 + F 100 -14.8 -3.87075 | opp_overlap 411010, overlap 411010 GAATAAAATTTTGCA CAGAAAAGAGAG AACGC CTCTCTTTTCTG TTTCTCAGGGATCCT TERM 539 411024 - 411010 - f 76 -6.4 -4.52857 | opp_overlap 411010 411003 ATTTTGCACAGAAAA GAGAGA ACG CCTCTC TTTTCTGTTTCTCAG TERM 540 411010 - 411024 + F 77 -5.7 -4.84918 | opp_overlap 411010, overlap 411003 ATTTTGCACAGAAAA GAGAG AACGC CTCTC TTTTCTGTTTCTCAG CCA00358 411111 - 413180 + | hypothetical protein CCA00359 413180 - 413521 + | glycine cleavage system protein H CCA00360 413645 - 413938 + | hypothetical protein CCA00361 413960 - 414292 + | hypothetical protein nqrE 415088 - 414294 - | Na(+)-translocating NADH-quinone reductase subunit E nqrD 415734 - 415093 - | Na(+)-translocating NADH-quinone reductase subunit D nqrC 416680 - 415721 - | Na(+)-translocating NADH-quinone reductase subunit C nqrB 418196 - 416685 - | Na(+)-translocating NADH-quinone reductase subunit B TERM 541 417472 - 417482 + g 70 -5.4 -4.33274 | opp_overlap 417472 GATTGTGAGAAGCCA TCGA TAA TCGA TTTTCCTGCTGTAGA TERM 542 418744 - 418764 + r 78 -10.5 -2.63113 | opp_overlap 418744, overlap 418743 418741 418762 GTAATTTAAAGAAAA CTATAGGCT CTG GGCCTATAG GTATTCTATCTACTT TERM 543 418764 - 418744 - R 100 -9.8 -4.94058 | opp_overlap 418744 418743 418741 418762 GTAATTTAAAGAAAA CTATAGGC TCTGG GCCTATAG GTATTCTATCTACTT CCA00367 419433 - 418843 - | hypothetical protein dnaA 420802 - 419450 - | chromosomal replication initiation protein TERM 544 420042 - 420060 + g 72 -4.6 -4.7923 | AGTTGTCCTGGGGGT TTGTCACT CGT AATGACAA TTTGTTTATTTAAAT TERM 545 420511 - 420541 + g 76 -2 -5.42514 | gap 3, overlap 420500 420514 CAGGGCTCTCTTGGG GCTCTCTAGGCGCAA TGGG TTGCG-C-AG-GAGC TTTTTTGATTTCTGC CCA00369 420818 - 420982 + | hypothetical protein CCA00370 421430 - 420999 - | type III secretion chaperone, putative CCA00371 421982 - 421434 - | hypothetical protein TERM 546 421776 - 421794 + g 79 -9.6 -3.78436 | opp_overlap 421776 421780 ATTAGGAGGTGAAAA GAAAGCCC AAT GGGTTTTC TTATTCGTCTGCATT TERM 547 421794 - 421776 - G 76 -7.4 -4.15833 | opp_overlap 421776, overlap 421780 ATTAGGAGGTGAAAA GAAAGCCC AAT GGGTTTTC TTATTCGTCTGCATT TERM 548 422203 - 422229 + G 70 -8.1 -3.65604 | overlap 422202 GTAAATGAGTGTTTG TCTTGGTTTTC TGATC GAAATCCAAGA TCTTTCTGTGATGTT mraW 422155 - 423048 + | S-adenosyl-methyltransferase MraW CCA00373 423048 - 423335 + | hypothetical protein TERM 549 424241 - 424255 + G 73 -5.7 -4.57341 | opp_overlap 424241 AACATACAAAAGTGA CGTCA ATAAG TGACG TTTTTGAACCAGGTT TERM 550 424585 - 424568 - g 77 -4.9 -4.86731 | gap 1, opp_overlap 424581 424582, overlap 424582 GCTTTGGAAAGAAAA CGGG-AAT AGA ATTACCCG GAGAAGCTGCGGGAT pbp3 423322 - 425271 + | penicillin-binding protein CCA00375 425717 - 425274 - | hypothetical protein TERM 551 425918 - 425930 + H 82 -3.3 -5.76633 | ATTTATGACGCATGA GCGTG AGC CAGGC TTTTTTTCTGTATGC TERM 552 426209 - 426228 + GH 79 -8.6 -3.82946 | opp_overlap 426209 426208 CTTGCTATTGAAAAC GGCGCTAT TGCT ATAGCGTC TTCTATTTACAATCC TERM 553 426423 - 426449 + GH 79 -8 -4.07568 | overlap 426426 GTTGCAATAAGCCTT CGGGCTTGATAG GAA CTATCGAGCATG TTTTAGGGAACAACC TERM 554 426426 - 426446 + GH 79 -10.5 -2.78032 | overlap 426423 GCAATAAGCCTTCGG GCTTGATAG GAA CTATCGAGC ATGTTTTAGGGAACA TERM 555 427331 - 427306 - gH 79 -5.5 -4.85782 | overlap 427307 GTTTGTAAAAAGAAA TTTTTCTATCG AAAT CGACAGAAAAC AAGCAATTACATATG TERM 556 427330 - 427307 - gH 75 -9 -3.50746 | overlap 427306 TTTGTAAAAAGAAAT TTTTCTATCG AAAT CGACAGAAAA CAAGCAATTACATAT murE 426032 - 427483 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 557 427802 - 427785 - gf 70 -4.1 -4.82998 | GCAAATCAAAACAAA GCTGATA TTTT TGTCAGC ATCCACTGTAATTAT CCA00377 427398 - 428195 + | N-acetylmuramoyl-L-alanine amidase TERM 558 428786 - 428776 - g 79 -5.4 -4.99043 | overlap 428782 428783 428785 GTTGTAGAAAGAAAA CCTA AAG TAGG GCGCAACCCTAAAAA CCA00378 428599 - 428901 + | integration host factor beta-subunit, putative TERM 559 428929 - 428973 + F 93 -7.3 -5.70522 | opp_overlap 428931 428936, overlap 428930 428931 CTCTTTTATCTAATT TATCAGAGTCAAGTTTTTAGG ATG CTTAGAGACTTGACTCTAAAG TTTTTTGTTATTATT TERM 560 428930 - 428972 + F 82 -8.6 -3.98653 | opp_overlap 428931 428936, overlap 428929 428931 TCTTTTATCTAATTT ATCAGAGTCAAGTTTTTAGG ATG CTTAGAGACTTGACTCTAAA GTTTTTTGTTATTAT TERM 561 428931 - 428971 + F 85 -12.1 -2.96752 | opp_overlap 428931 428936, overlap 428930 428929 CTTTTATCTAATTTA TCAGAGTCAAGTTTTTAGG ATG CTTAGAGACTTGACTCTAA AGTTTTTTGTTATTA CCA00379 429029 - 430210 + | hypothetical protein TERM 562 430208 - 430220 + F 71 -3.5 -5.03145 | TTTGAAAAATGCAAT TAATA GTT TATTA TTTTTTGAAAAATTC accA 430316 - 431290 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 563 431349 - 431361 + GT 83 -3.4 -5.65927 | GGACTCACGGTATCT TCTC AAGCA GAGA TTTTTTCTTTAAGTA TERM 564 432202 - 432212 + GT 75 -5.4 -4.82855 | opp_overlap 432202 CACTATTGCATACGA TAGC CTC GCTA TTTTTCGCTTTCGTG TERM 565 432728 - 432750 + GT 74 -9.2 -3.14344 | opp_overlap 432731 CGATACTATTTGGAA TAACCTTACC TGC GGTAAGGATA TTCCTGAAGACGATG TERM 566 432747 - 432731 - gT 89 -10.9 -3.63991 | opp_overlap 432728 TACTATTTGGAATAA CCTTACC TGC GGTAAGG ATATTCCTGAAGACG CCA00381 431256 - 433217 + | ABC transporter, ATP-binding protein CCA00382 433879 - 433226 - | hypothetical protein TERM 567 433497 - 433483 - G 79 -8.6 -4.00038 | GAGCATGAGCAGAAA CCAAAG AGG CTTTGG GAAGATTAGGAAGCG CCA00383 434633 - 433860 - | hypothetical protein dnaQ-2 435316 - 434630 - | DNA polymerase III subunit epsilon TERM 568 434717 - 434739 + g 70 -9.9 -2.50821 | opp_overlap 434714 434715, overlap 434717 434715 434722 434729 TTGGATATAAGATGC GGGAACCTC AGTGA GAGGTTTCC CTCTGTATTTGCCAA TERM 569 434776 - 434807 + g 72 -10.2 -2.62184 | opp_overlap 434758 TTTTAAAAGCTTTAG GATGCTGGCTCT CTTCCATT AGAGCCAGCACC TGCTCTGCAGAGAGA TERM 570 435005 - 435023 + g 100 -13.2 -4.15565 | opp_overlap 435009 GGATAAAGGTTCCAA GGAATGCC TAC GGCATTCC TTTTCAAGTAGTGGG CCA00385 435804 - 435331 - | hypothetical protein CCA00386 436342 - 435836 - | hypothetical protein TERM 571 436819 - 436840 + G 72 -3.1 -5.06414 | gap 1, overlap 436822 436823 ATTCTGGATGGCAGA TATTCTTCCT TAC AGGAAG-GTA TTTTTCTTACGCGCG TERM 572 436822 - 436838 + G 76 -7.3 -4.16307 | overlap 436819 436823 CTGGATGGCAGATAT TCTTCCT TAC AGGAAGG TATTTTTCTTACGCG CCA00387 436707 - 437594 + | HAD family phosphatase , putative fabI 438480 - 437581 - | enoyl-(acyl carrier protein) reductase TERM 573 439980 - 439990 + G 76 -6.8 -4.34912 | opp_overlap 439978 439980 ATTAGAAGACAAATA CAGC TCT GCTG TTGTTTTAATTGCTT CCA00389 438745 - 440925 + | hypothetical protein TERM 574 440976 - 440942 - f 76 -6.7 -4.46493 | gap 1, opp_overlap 440954, overlap 440943 440945 TTAAATACATCAAAA CGATTATCAAAATAGC CAAG GCTATTTTGATGAT-G AACATCCGAGCGTGT TERM 575 440974 - 440945 - f 77 -9.5 -3.17875 | opp_overlap 440954, overlap 440942 440943 AATACATCAAAACGA TTATCAAAATAGC CAAG GCTATTTTGATGA TGAACATCCGAGCGT CCA00390 441052 - 443748 + | hypothetical protein TERM 576 444080 - 444092 + F 77 -10.5 -2.53015 | opp_overlap 444077 444075 TTCCAAAAATTACAG CGCCG CAA CGGCG TGACTTGGGAGCTGT TERM 577 444667 - 444655 - g 75 -2.7 -5.18561 | GAAAGAGCGAAAAAA TTTCC TGT AGAAA AGTTAAAACAATGGT TERM 578 444848 - 444829 - g 77 -9.4 -3.54475 | TTTCCGACTATAGAA TCTTTAGC CACA GCTAAAGA AGAAGATGTCATTAA mutY 444619 - 445728 + | adenine glycosylase CCA00393 445733 - 446119 + | mazG protein, putative CCA00394 447079 - 446303 - | hypothetical protein TERM 579 446541 - 446528 - G 71 -5.3 -4.58395 | TTTATTTTTTAAAAA GGTTT GTAA AAACC CTCTGAAGAATATCT CCA00395 447727 - 447083 - | hypothetical protein CCA00396 448063 - 447932 - | hypothetical protein TERM 580 448436 - 448410 - R 100 -13.1 -5.37593 | gap 1, opp_overlap 448415 TTTGAAATGAAAAAA GGAACCACGGAC GTAT GTCCG-GGTTCC TTGCAATGTTTAAGA CCA00397 448833 - 448468 - | hypothetical protein CCA00398 450029 - 448899 - | hypothetical protein CCA00399 450320 - 451069 + | serine/threonine protein phosphatase, putative TERM 581 451715 - 451731 + G 70 -3 -5.03715 | TTATCTCTCCAAGAG TGAAGG TATCC CCTTTA TTTTTTGGAGGTGGT CCA00400 451093 - 452208 + | nifS protein, putative TERM 582 452205 - 452183 - T 77 -9.2 -3.17901 | opp_overlap 452187 AGATCGTCAAGGTAA CCACGCATTT AAA AAATGCTTGG TAGAGCTATGAGAGT hly3 453425 - 452211 - | CBS domain-containing protein tlyC_1 454653 - 453418 - | CBS domain-containing protein TERM 583 453709 - 453723 + g 73 -8.6 -3.70853 | opp_overlap 453709 453708 453711 AATTTCTCCAGAAAC GATCTC AAA GAGATC TTCTTGAGTGATTAA CCA00403 454992 - 454663 - | hypothetical protein TERM 584 454798 - 454826 + g 75 -2.5 -5.25803 | overlap 454800 AATATGCAGTCGAAG TTCTTTTTGCT CTTCTTC AGCATAAAGGA TTTTTTCTCGAAGTT dcd 455574 - 455002 - | deoxycytidine triphosphate deaminase CCA00405 455826 - 455671 - | hypothetical protein ruvB 456177 - 457190 + | Holliday junction DNA helicase B CCA00407 457187 - 458002 + | hypothetical protein CCA00408 459983 - 457995 - | glycosyl hydrolase family protein TERM 585 458813 - 458787 - G 74 -5.1 -4.66163 | opp_overlap 458793 ATCCCCATTTAAAAA GGACTTTATCG TATCG CGATATTGTCC ATTCCATTCGCTCCA CCA00409 460116 - 460622 + | hypothetical protein ssb 461294 - 461779 + | single-strand DNA-binding protein TERM 586 462486 - 462470 - g 70 -8.1 -3.66803 | overlap 462473 TGTGAAGATTTTAAA TAAGGAT GCT ATCCTTA AAGAAAAAATGGGTC TERM 587 462519 - 462541 + G 81 -5.6 -5.093 | opp_overlap 462522, overlap 462500 462498 462522 TTAGCTGCAGTGGCT AAAGGATCTG CTG TAGATCCTTG TTTTATTGTTTTGAC TERM 588 462522 - 462538 + G 81 -7.3 -4.59946 | opp_overlap 462522, overlap 462500 462498 462519 GCTGCAGTGGCTAAA GGATCTG CTG TAGATCC TTGTTTTATTGTTTT pepA 461817 - 463316 + | leucyl aminopeptidase TERM 589 463337 - 463394 + F 72 -2.6 -5.25805 | gap 2, opp_overlap 463346 463347 463364, overlap 463346 463347 TTTAAACTTCTTTTG ATTTAGTAA--TGCGTATTTGTTTTTAA ATTA TTAAAAATAAATACGCGTTTTATTAAAG TTTTTTCAATTTCTT TERM 590 463383 - 463346 - f 73 -8.7 -3.18264 | opp_overlap 463337 463346 463347, overlap 463347 463364 CTTTTGATTTAGTAA TGCGTATTTGTTTTTAA ATTA TTAAAAATAAATACGCG TTTTATTAAAGTTTT TERM 591 463346 - 463383 + F 100 -13.1 -4.70613 | opp_overlap 463346 463347 463364, overlap 463337 463347 CTTTTGATTTAGTAA TGCGTATTTGTTTTTAA ATTA TTAAAAATAAATACGCG TTTTATTAAAGTTTT TERM 592 463347 - 463382 + F 100 -14.4 -3.40741 | opp_overlap 463346 463347 463364, overlap 463346 463337 TTTTGATTTAGTAAT GCGTATTTGTTTTTAA ATTA TTAAAAATAAATACGC GTTTTATTAAAGTTT TERM 593 463382 - 463347 - f 84 -12.2 -2.50816 | opp_overlap 463347 463346 463337, overlap 463346 463364 TTTTGATTTAGTAAT GCGTATTTGTTTTTAA ATTA TTAAAAATAAATACGC GTTTTATTAAAGTTT TERM 594 463509 - 463495 - g 75 -5.7 -4.73613 | opp_overlap 463495, overlap 463480 GTAGCAGCAAGAAAA CAGCT ACCAA AGCTG TTCGTAAACCTGCTA hctB 463458 - 463916 + | Hc2 nucleoprotein TERM 595 463944 - 463972 + F 86 -2.6 -5.85178 | gap 2, overlap 463952 TTAGACGAGGGTGAA CGGTAAG--GCTTT ATA AAAGTTTCTTACCG TTTTTTTTGCCTGTT CCA00413 464066 - 465001 + | hypothetical protein CCA00414 464998 - 465708 + | tetrapyrrole methylase family protein TERM 596 465739 - 465725 - T 73 -7.2 -4.03234 | opp_overlap 465725 CTCTTGTGAGAGAAA CCTTTA TGT TAAAGG TTTCTCATGAATATC TERM 597 465725 - 465739 + T 73 -7.2 -3.98661 | opp_overlap 465725 CTCTTGTGAGAGAAA CCTTTA TGT TAAAGG TTTCTCATGAATATC CCA00415 465961 - 465728 - | hypothetical protein TERM 598 467241 - 467223 - g 72 -9.6 -3.06528 | overlap 467221 467220 AAACGAAAAATACTA CCTATCCA AAT TGGACAGG AATGGATGTGCCGTT CCA00416 466367 - 467674 + | hypothetical protein TERM 599 467712 - 467687 - T 87 -10.6 -3.71924 | opp_overlap 467687 467690, overlap 467690 TAAATTATGGAATAA TAAGGCTAAG AATAAA CTTAGCCTTA TTTTAAGAATCTATG TERM 600 467687 - 467712 + T 100 -10.6 -4.13728 | opp_overlap 467687 467690, overlap 467690 TAAATTATGGAATAA TAAGGCTAAG AATAAA CTTAGCCTTA TTTTAAGAATCTATG TERM 601 467690 - 467709 + T 78 -7.9 -4.18908 | opp_overlap 467687 467690, overlap 467687 ATTATGGAATAATAA GGCTAAG AATAAA CTTAGCC TTATTTTAAGAATCT TERM 602 467709 - 467690 - T 76 -7.9 -3.97709 | opp_overlap 467690 467687, overlap 467687 ATTATGGAATAATAA GGCTAAG AATAAA CTTAGCC TTATTTTAAGAATCT CCA00417 469258 - 467723 - | hypothetical protein CCA00418 470447 - 469320 - | coproporphyrinogen III oxidase CCA00419 470883 - 470437 - | hypothetical protein TERM 603 471658 - 471668 + G 70 -5.4 -4.39277 | CTTAATTCCTATGCT TGAG CAT CTCA TTTATTATGGTGTTA TERM 604 473691 - 473676 - g 71 -7.6 -3.79849 | TAAGCAGACCAAGAA GTAGCT CGAC AGCTAC AGGATCTGCACGTCT kgd 471038 - 473764 + | alpha-ketoglutarate decarboxylase TERM 605 474103 - 474091 - g 70 -9.1 -3.2048 | TCTAAAGCTCACGAA CCTCC TGC GGAGG GGAAAACTTTTGTTC TERM 606 474606 - 474622 + G 70 -9.5 -2.62439 | opp_overlap 474603, overlap 474605 474603 AGAAGGAGGAAGCTT CACCATT ACT AATGGTG GTGTTTACGGCTCTT sucB 473761 - 474858 + | dihydrolipoamide acetyltransferase TERM 607 474880 - 474899 + T 95 -8.6 -5.5353 | opp_overlap 474880 474883 ATCTAGGAAGAAGAA GAACAGCG GTAA CGTTGTTC TTTTTTATTGGTGTA CCA00422 475603 - 474863 - | hypothetical protein TERM 608 475315 - 475298 - G 70 -5.5 -4.46212 | TTCGGGATCATAAAA GATGGCC GGTT GGCAATC AGAATGGCGGATATG TERM 609 475363 - 475386 + g 72 -8.8 -3.52102 | opp_overlap 475362 475361 475365 CCTCGGTATACAATC CATCTGCAGG GCAT CCTGCAGGGG TTGTATACGTAGCGT gcpE 477439 - 475619 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase CCA00424 478974 - 477772 - | hypothetical protein CCA00425 480048 - 479074 - | hypothetical protein TERM 610 479762 - 479748 - G 73 -5.6 -4.62783 | CATCCACTTCAAAAA GGAAGG ACG CCCCCC TAGGAATAGATTTCA TERM 611 479766 - 479786 + g 71 -7 -4.13711 | opp_overlap 479769, overlap 479769 AGGACGCCCCCCTAG GAATAGAT TTCAT ATCTATTC TTTCTGCTATTTTAG TERM 612 480402 - 480361 - R 79 -9.7 -3.18446 | gap 1, opp_overlap 480361 480362, overlap 480359 480358 480362 AAGGGGATAAAACTA TCATGCACCTCAA-ATTAAG ATT CCTAATGTTGAGATGCATGG TTTTCTTATATTTTT TERM 613 480361 - 480402 + r 88 -7.5 -5.0095 | gap 1, opp_overlap 480359 480358 480361 480362, overlap 480362 AAGGGGATAAAACTA TCATGCACCTCAA-ATTAAG ATT CCTAATGTTGAGATGCATGG TTTTCTTATATTTTT TERM 614 480401 - 480362 - R 87 -13.2 -2.50345 | gap 1, opp_overlap 480361 480362, overlap 480361 480359 480358 AGGGGATAAAACTAT CATGCACCTCAA-ATTAAG ATT CCTAATGTTGAGATGCATG GTTTTCTTATATTTT TERM 615 480362 - 480401 + r 77 -8.8 -3.5691 | gap 1, opp_overlap 480362 480361 480359 480358, overlap 480361 AGGGGATAAAACTAT CATGCACCTCAA-ATTAAG ATT CCTAATGTTGAGATGCATG GTTTTCTTATATTTT CCA00426 481561 - 480422 - | hypothetical protein TERM 616 481422 - 481408 - G 72 -10 -2.64803 | overlap 481405 481404 TGATGGCTAAAGCTA GGGTTG TCA CAACCC AGACAAGGGACAAAG TERM 617 481773 - 481731 - R 79 -5.2 -5.09762 | gap 1, opp_overlap 481731 ATTCTAAGATAAAAA GATCAAGATATTT-ACAAT AAGTGA AACGTTAAATATCTTGATC TTTTTCAGGATTTAA fer4 482060 - 481785 - | ferredoxin TERM 618 481877 - 481899 + g 78 -4 -5.19998 | overlap 481893 CAAGAAAATCTTTTT CCTCATCGGT GAA GTCGGAGAGG TTTTCTTTTCCTTCT flhA 482340 - 484097 + | type III secretion system protein TERM 619 484211 - 484196 - f 86 -6.2 -5.4833 | TTACTGAAGAAAAAA TTTGTG AAAA CACAAA ACACGCAAAACATTT CCA00429 484199 - 484972 + | RNA polymerase sigma factor sigma-28 CCA00430 485247 - 484969 - | hypothetical protein TERM 620 485274 - 485295 + H 81 -6 -4.94222 | opp_overlap 485274 485272 485292, overlap 485292 AAAAAGAAAAAACGA TCCATTTT AATCTA AAAATGGA TTTTTCTCCATTATT tyrS 485409 - 486647 + | tyrosyl-tRNA synthetase gnd 486664 - 488109 + | 6-phosphogluconate dehydrogenase TERM 621 488157 - 488171 + T 71 -8.6 -3.0263 | overlap 488143 488159 ATGGTCGAATCTTTT GACAAG TTT CTTGTC TCTTCCAGGGGTGCT TERM 622 488176 - 488199 + T 71 -3 -5.06472 | overlap 488180 AGTTTCTTGTCTCTT CCAGGGGTGC TTCG GCACCCTTTC TTTTATTGTTTATCT TERM 623 488180 - 488195 + T 100 -10.4 -4.98461 | overlap 488176 TCTTGTCTCTTCCAG GGGTGC TTCG GCACCC TTTCTTTTATTGTTT lepA 490139 - 488331 - | GTP-binding protein LepA TERM 624 490843 - 490853 + G 70 -5.4 -4.44797 | opp_overlap 490843, overlap 490821 TCACAACTAAGGGAA GCTA TCA TAGC TTTTGGTGTTGATAA CCA00434 490384 - 491739 + | hypothetical protein TERM 625 491784 - 491743 - T 87 -11.1 -3.45231 | opp_overlap 491752, overlap 491752 GCAGATATTTAAAGA CAAAAAAAATCCTCACTTG TAAA CAGGTGAGGATTTCTTCTA CTAAAATCTCTACTT TERM 626 491752 - 491775 + T 100 -11.8 -4.35483 | opp_overlap 491752 491743 TAAAGACAAAAAAAA TCCTCACTTG TAAA CAGGTGAGGA TTTCTTCTACTAAAA TERM 627 491775 - 491752 - T 100 -9.6 -6.15717 | opp_overlap 491752, overlap 491743 TAAAGACAAAAAAAA TCCTCACTTG TAAA CAGGTGAGGA TTTCTTCTACTAAAA tlc-2 493404 - 491803 - | ADP, ATP carrier protein TERM 628 492860 - 492872 + g 74 -6.3 -4.39989 | AAAGCGTAGAAACGT TTAGC TTC GCTAA TTTTGGTAATTTCAT CCA00436 494131 - 493628 - | hypothetical protein CCA00437 494620 - 495585 + | ABC transporter, periplasmic substrate-binding protein, putative TERM 629 495663 - 495683 + G 85 -11.3 -3.34894 | overlap 495661 GTTTTATGCCATGTT TCCTTTTCT TTA AGAAAAGGA TCTTTAACAGCAGTT TERM 630 496037 - 495997 - g 93 -11.2 -4.27886 | opp_overlap 495999 496004, overlap 495999 496027 TGGCAAATAGACAAA TAGGAAAGCTCTCTGGAG GACAA CAACAGAGAGCTTTCCTT GCTCGAGCTCTTATG TERM 631 495999 - 496035 + G 93 -13.8 -3.16668 | opp_overlap 495997 495999 496027, overlap 496004 GCAAATAGACAAATA GGAAAGCTCTCTGGAG GACAA CAACAGAGAGCTTTCC TTGCTCGAGCTCTTA TERM 632 496035 - 495999 - g 95 -13.8 -3.73323 | opp_overlap 495999 496004, overlap 495997 496027 GCAAATAGACAAATA GGAAAGCTCTCTGGAG GACAA CAACAGAGAGCTTTCC TTGCTCGAGCTCTTA CCA00438 495582 - 496361 + | ABC transporter, ATP-binding protein CCA00439 496362 - 497711 + | ABC transporter, permease protein, putative CCA00440 497708 - 498691 + | ABC transporter, permease protein, putative TERM 633 499243 - 499232 - g 75 -3 -5.26875 | opp_overlap 499232 TTCTGAAGTAAAAAA GTTA GTAT TAAC TGCTTCTGGAGGTCC dxr 498732 - 499871 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 634 501159 - 501145 - g 70 -8.6 -3.27994 | TTAATTCCATAGGAA GTACTC AAG GAGTAC GAGAGTCAGGTCAGT CCA00442 499884 - 501752 + | zinc protease CCA00443 502683 - 501703 - | hypothetical protein TERM 635 501791 - 501838 + g 71 -7.2 -3.83502 | gap 1, opp_overlap 501796 501803 501807, overlap 501793 501794 501796 501803 501807 TAGAGATTGTAAGGA TGAGAGCCAAAACAATGGATAAC ATA GATATCC-TTGTTTTTGCTCGTA TTTAGTCTAGAGCTC TERM 636 501794 - 501835 + g 76 -11.1 -2.69871 | gap 1, opp_overlap 501796 501803 501807, overlap 501793 501791 501796 501803 501807 AGATTGTAAGGATGA GAGCCAAAACAATGGATAAC ATA GATATCC-TTGTTTTTGCTC GTATTTAGTCTAGAG TERM 637 501807 - 501823 + g 71 -5.1 -4.49314 | opp_overlap 501807 501803 501796, overlap 501803 501796 501794 501793 501791 GAGAGCCAAAACAAT GGATAAC ATA GATATCC TTGTTTTTGCTCGTA TERM 638 502548 - 502537 - G 75 -5.8 -4.66953 | GTAAGATCTTAAAAA TGCG TGAA CGCA GATTACAGATTCTTT recF 503895 - 502792 - | recombination protein F TERM 639 503211 - 503223 + g 75 -7.7 -4.10437 | overlap 503207 CAATAATAGCTTCTT GGGAA AGA TTCCC TTGTTTAATTAGTGA TERM 640 503576 - 503556 - G 71 -6.9 -4.0865 | opp_overlap 503559 503569 503570, overlap 503557 503570 TGGAAGAAAATAGAA CGATAGGCA CCA TACCTATCA ATTGCGATAGGGTTT dnaN 504995 - 503895 - | DNA polymerase III subunit beta smpB 505234 - 505686 + | SsrA-binding protein apbE 506614 - 505667 - | thiamine biosynthesis lipoprotein TERM 641 506494 - 506517 + gT 100 -9.7 -5.28176 | ACAGATATTTCCCTA TGACAATGC GGTAAG GCATTGTCA TTTTTTCTCCCTCCA folD 507447 - 506584 - | methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase TERM 642 507049 - 507030 - GR 90 -12.2 -3.39749 | opp_overlap 507043 GCAATAACTCTATAA TCCCTGCA GGTG TGCAGGGA GCAAAACCTCCCAGC TERM 643 507429 - 507414 - GR 71 -9 -3.09327 | TGATTTTATTTAAGA CCCGTT CGGC AACGGG GGCTCCTTTTAATAA CCA00449 507953 - 507438 - | hypothetical protein ltuB 508155 - 508445 + | LtuB protein TERM 644 508539 - 508583 + F 79 -9 -3.73775 | gap 2, opp_overlap 508539 508538 TTTGCGCTCCAGAAG CTG-CC-GCAATATTAAGAT CTCCACA ATCTTAATATTGCTGGACAG TTTGGTACGAGTACC TERM 645 508583 - 508539 - f 75 -9.7 -2.57132 | gap 2, opp_overlap 508539, overlap 508538 TTTGCGCTCCAGAAG CTG-CC-GCAATATTAAGATC TCCAC AATCTTAATATTGCTGGACAG TTTGGTACGAGTACC TERM 646 508675 - 508696 + F 100 -14.5 -6.60239 | ATTTTTAAGTTTTTT CGCAAGGTG CCGC CACCTTGCG TTTTTTTTTGTTTTT TERM 647 510329 - 510305 - g 95 -12.1 -4.27519 | opp_overlap 510301 510305 AGTTGAGAAGAGAAA GGGGCCTGGAG CAC CTCCAGATCCC TTAATTTATCAATAC TERM 648 510305 - 510329 + G 89 -12.1 -3.61988 | opp_overlap 510305, overlap 510301 AGTTGAGAAGAGAAA GGGGCCTGGAG CAC CTCCAGATCCC TTAATTTATCAATAC CCA00451 508818 - 510557 + | hypothetical protein TERM 649 510940 - 510977 + G 80 -10.7 -3.30203 | gap 1, overlap 510950 CCTGTGAAGATAGGG GCATCTGCAGC-TCAG GCTATTG CTGATGCTGCAGAGGC TTGGGTTATTGCTCG CCA00452 510568 - 511053 + | hypothetical protein CCA00453 512105 - 511050 - | phospholipase D family protein TERM 650 511711 - 511734 + g 71 -6 -4.23213 | TGTTTGTCATCTATT GCTAGTGCTT TTTG ATGCATTAGC TTTCTTCCCTCTGCA CCA00454 513956 - 512211 - | hypothetical protein TERM 651 513458 - 513472 + g 73 -7.2 -4.11216 | opp_overlap 513458 TTTGCATGCGATACA TTCCTA AGT TAGGAA TTTTAGAACTAGGAG rpmB 514244 - 513975 - | 50S ribosomal protein L28 malQ 516006 - 514414 - | 4-alpha-glucanotransferase TERM 652 515213 - 515199 - G 72 -10 -2.62613 | overlap 515198 515196 CTGTATTGTAAATAT CTGGAG GGG CTCCAG CAGATCCTGAAGAGG sycE 516503 - 516063 - | type III secretion chaperone copN 517712 - 516519 - | copN protein TERM 653 517432 - 517442 + g 71 -6.8 -4.053 | opp_overlap 517432 TACTTATCCGCAAGA TCCG CGT CGGA TTTATCTCCCGTGCT sctV 519872 - 517743 - | type III secretion inner membrane protein SctV TERM 654 518809 - 518855 + g 70 -2.8 -5.01732 | overlap 518811 518852 518854 TCGCCAGCTGTTGCT GCTCCATCGGCAGCAGCCCCCA CCG TTGTTGTTGCTCCCGATGCACC TTTTTTAGAGGCGTT CCA00460 520954 - 519872 - | type III secretion system protein TERM 655 520551 - 520561 + g 78 -4 -5.29846 | overlap 520556 AACTCGATTAAAGTC TTCA CCT TGAA TTTTTGTTTCAAGTT TERM 656 520907 - 520934 + g 79 -4.8 -5.06052 | gap 1 CTGGCCTTTTTTCCT GGCG-TCTCTAAG ACG CTTCGGGGTCGCC TTTTCTGTTTTTTCA CCA00461 521317 - 522411 + | translation-associated GTPase ribF 523303 - 522389 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 657 522467 - 522481 + g 100 -5 -6.09888 | opp_overlap 522466 AGCTTTTGATAAATC TTCTCT GGA AGGGAA TTTTTTTTCTTCACG TERM 658 523432 - 523417 - R 71 -7.6 -3.54459 | CGAAGTTCTTCCAAA TAGGCT CCAC AGCCTA GCATATTTCCTAGTT rbfA 524397 - 524035 - | ribosome-binding factor A TERM 659 524110 - 524100 - G 78 -4 -5.31275 | CCTGAGGAGAAAAAA TATC TTC GATA TAAAAATGTATCTCA infB 527067 - 524404 - | translation initiation factor IF-2 TERM 660 525400 - 525416 + gr 73 -7.3 -4.02022 | AAGTTCTAAAACTTC TGCTTGT AGG GCAAGCA TTTCTAGTAGTTCAG TERM 661 526091 - 526105 + gr 71 -8.6 -2.97475 | opp_overlap 526075 526074, overlap 526075 526074 526090 TTCTGAATAAGCTCA GAAGCT TTT AGCTTC ATTTCTGCTGCAAGA TERM 662 526195 - 526209 + gr 81 -2.8 -5.63504 | TTCGTAGTGTTTTTT CGTTTT TTG AACACG TTTTTTTCTCCACTT TERM 663 526313 - 526323 + gr 81 -5.4 -5.0133 | opp_overlap 526313 GCACGATCTCTGAAA TCAG ATC CTGA TTTTTTAGACACATC TERM 664 526929 - 526943 + gr 71 -5 -4.61873 | GAACCTTAGTTGAAG GCTTTT CTG AAGAGC TTTTCGTTTCTGAAG nusA 528328 - 527024 - | transcription elongation factor NusA rpsA 530166 - 528421 - | 30S ribosomal protein S1 TERM 665 528783 - 528797 + g 100 -5 -5.73563 | TCGAACTTAATTGTT TGACTC CAA GAGTTA TTTTTTTACTTTCCT trxB 530335 - 531270 + | thioredoxin reductase acpS 531630 - 531262 - | 4'-phosphopantetheinyl transferase CCA00470 532092 - 531646 - | hypothetical protein TERM 666 531750 - 531739 - G 80 -4.4 -5.26316 | opp_overlap 531739 GGAGCGGATAAAAAA GAGA GTGG TCTC ATTATGAATGTATCT TERM 667 532348 - 532338 - g 85 -4 -5.6473 | overlap 532330 AGAAGATGAAAAAAA CTTT TCT AAAG AACAGCTTAGTGGAG TERM 668 532684 - 532667 - g 74 -6.3 -4.34737 | overlap 532669 TTATGAATCAAGAAA TCGTAGG AAAA CCTACAA GCTTGCCCTGGGGAA lgt 532162 - 533052 + | prolipoprotein diacylglyceryl transferase TERM 669 534336 - 534319 - g 75 -9.9 -3.37056 | ATGACCTATGGATAA CTTCAGG GATT CCTGAAG TTGAAATAATGTCTA TERM 670 534429 - 534445 + G 79 -9.5 -3.64822 | opp_overlap 534428 GTGAAATTACCTAAG GCTAAAG ATC CTTTAGC TTTGCGTAGCGGAGT TERM 671 534830 - 534845 + G 71 -4.8 -4.60487 | TTTTGCAGCTTTACT TTTCAT CATT ATGAAA TTTTTCAGAATGATA CCA00472 533148 - 535532 + | putative inner membrane protein translocase component YidC TERM 672 536013 - 535992 - g 79 -10.8 -3.22884 | opp_overlap 535992 GCAGGAATTTACCAA GCCCGCGG AAGATA CCGCAGGC TTTCCATTTAATCCC TERM 673 535992 - 536013 + G 77 -8.6 -3.87149 | opp_overlap 535992 GCAGGAATTTACCAA GCCCGCGG AAGATA CCGCAGGC TTTCCATTTAATCCC TERM 674 536362 - 536375 + G 73 -6.7 -4.18197 | opp_overlap 536362 AAGGCTATGGAAGAA CGACT CATC AGTCG TTTTGAATGGGGAGT dnaA 535600 - 536982 + | chromosomal replication initiation protein CCA00474 537374 - 536979 - | hypothetical protein glgP 537530 - 539980 + | glycogen phosphorylase TERM 675 540024 - 539986 - T 100 -12.6 -5.43866 | opp_overlap 539986 TAAGTCTTAAAAAAA GCATTTCTATTTCAGGAG AGA CTCCCTTAATAGAAATGC TTTTGACTATGAAAA TERM 676 539986 - 540024 + T 100 -10.4 -4.2349 | opp_overlap 539986 TAAGTCTTAAAAAAA GCATTTCTATTTCAGGAG AGA CTCCCTTAATAGAAATGC TTTTGACTATGAAAA pdhC 541340 - 540054 - | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 677 540123 - 540155 + g 79 -10.7 -3.20841 | opp_overlap 540126, overlap 540121 540124 540126 AAACATCGCTGCAGG ATATCCATCGATCAC ACG GTGATCTATGGATAA TGTTAATATGCATGT TERM 678 540124 - 540154 + g 93 -14.2 -2.52023 | opp_overlap 540126, overlap 540123 540121 540126 AACATCGCTGCAGGA TATCCATCGATCAC ACG GTGATCTATGGATA ATGTTAATATGCATG TERM 679 540152 - 540126 - G 83 -12.4 -2.78596 | opp_overlap 540124 540123 540121 540126 CATCGCTGCAGGATA TCCATCGATCAC ACG GTGATCTATGGA TAATGTTAATATGCA TERM 680 540126 - 540152 + g 83 -12.4 -2.79321 | opp_overlap 540126, overlap 540124 540123 540121 CATCGCTGCAGGATA TCCATCGATCAC ACG GTGATCTATGGA TAATGTTAATATGCA pdhB 542331 - 541345 - | pyruvate dehydrogenase, E1 component, beta subunit pdhA 543349 - 542324 - | pyruvate dehydrogenase, E1 component, alpha subunit TERM 681 544382 - 544360 - R 73 -4.2 -4.93696 | TGGAAATATCAAAAA CACAATTAAA ACA TTAAATTGCG GAGTTGAGTGTTTTA lpxD 545628 - 544549 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CCA00481 546195 - 545656 - | cationic outer membrane protein OmpH, putative CCA00482 548676 - 546304 - | outer membrane protein, putative TERM 682 547081 - 547095 + g 71 -6.4 -4.27474 | opp_overlap 547081 AGTCTCAACAGAATA GTCCTT AGA AAGGGC TTTGTTGATAGATTT TERM 683 548245 - 548257 + g 71 -4.9 -4.61199 | opp_overlap 548245 TCTGAGTTCATCAAA GTTTT TTA AAAAC TTTTCTCTATCGAAT recR 549450 - 548848 - | recombination protein RecR TERM 684 549099 - 549117 + g 75 -10.4 -3.1372 | overlap 549098 CATCAATATGTTTTC CTGTTATC GGG GATAACAG TGTTCCTAAGACATA fabH 549571 - 550578 + | 3-oxoacyl-(acyl carrier protein) synthase III fabD 550582 - 551508 + | acyl-carrier-protein S-malonyltransferase fabG 551513 - 552259 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 552371 - 552604 + | acyl carrier protein CCA00488 553142 - 552723 - | cyclic nucleotide-binding protein TERM 685 552878 - 552895 + g 71 -7.1 -3.83026 | overlap 552856 CGTTATATTCTCGAA GCTTATT GCTG AATAAGC TTTCCTCTCCGAAAC CCA00489 555934 - 553157 - | hypothetical protein TERM 686 553673 - 553653 - G 73 -8.5 -3.66288 | opp_overlap 553653 553652 GATTTTTGAATATAA TTTTTATGA TAA TCATAAAAA ATTGCTTTCAGGGCC TERM 687 554458 - 554472 + g 77 -10 -3.30605 | overlap 554462 TCTCCATAGTTTTTA GCTTGC TAG GCAAGC TTAGCTTATTCATAT TERM 688 555689 - 555699 + g 79 -3.2 -5.47821 | TAAAAATAGTGTTTT GGGT GAA ACTC TTTTTTTGAATAAAT TERM 689 556016 - 556031 + r 74 -3.4 -5.21709 | opp_overlap 556009 556016 AGATTAAATAAACAA TAAATT CGTA AATTTA TTTTTTAATGTCCGG incC 556596 - 556036 - | inclusion membrane protein C incB 557229 - 556633 - | inclusion membrane protein B TERM 690 557288 - 557266 - R 80 -6.4 -4.76802 | overlap 557267 557281 GGGAAAAATAATAAA GCTTAAGATA CGA TATCTTAAGG AAGAGAATATATCAA TERM 691 557287 - 557267 - R 81 -9.9 -3.44454 | overlap 557266 557281 GGAAAAATAATAAAG CTTAAGATA CGA TATCTTAAG GAAGAGAATATATCA CCA00492 558796 - 557315 - | sodium-dependent transporter, putative aaaT 560022 - 558802 - | sodium:dicarboxylate symporter family protein TERM 692 560120 - 560110 - H 76 -4 -5.34857 | TGAAATAAAATAAAA CTTT TTA AAAG TGTAACATGTCTTGT TERM 693 560904 - 560922 + G 75 -3 -5.31456 | overlap 560905 GCTCCTTTTTACGGC ACGGCATC GAT GATGACGG TTTTTTATGGGTTGC CCA00494 560127 - 561293 + | hypothetical protein CCA00495 561576 - 563708 + | hypothetical protein mgtE 563735 - 565147 + | magnesium transporter TERM 694 566653 - 566673 + G 71 -4.1 -4.87133 | opp_overlap 566631 566629 566626, overlap 566626 566624 TAACCAGCGTTATTT CTTCTAA CTCTTTC TTAGAAG TTTTATTTCCCAACT CCA00497 565287 - 566702 + | hypothetical protein TERM 695 566804 - 566775 - T 100 -11.7 -4.19879 | gap 1, opp_overlap 566775 AGAAAATGGGGAAAA GCAG-TCCTTAAAA TAT TTTTAAGGAGCTGC TTTTATTAGACTTAT TERM 696 566775 - 566804 + T 100 -11.7 -4.68705 | gap 1, opp_overlap 566775 AGAAAATGGGGAAAA GCAG-TCCTTAAAA TAT TTTTAAGGAGCTGC TTTTATTAGACTTAT xasA 568216 - 566816 - | amino acid antiporter fbaB 569283 - 568234 - | fructose-bisphosphate aldolase TERM 697 568800 - 568784 - G 71 -6.6 -3.99559 | GAACCAAAATAAATA GTTGCT CCTAC AGCAAC AGCACCCATATTATA TERM 698 569574 - 569591 + G 74 -4.7 -4.89477 | TTGTCAGCTTAATCT CGGCAGT AGTC GCAGCCG TTTTATTATTGACAA CCA00500 569450 - 571327 + | hypothetical protein TERM 699 571360 - 571395 + F 89 -7.1 -5.28983 | overlap 571356 CGTTAAGTGAGTCCC GTGAATAGGGATT TTTATAATTT AATCTCTATTCAC TTTTTATATTTTAAA TERM 700 571606 - 571619 + G 74 -5.3 -4.70626 | TATCTCCTTTTCAGT TTTCC CCGG GGAAA TTTTTGGAATTATTG TERM 701 571752 - 571775 + G 82 -11 -3.60035 | opp_overlap 571751 571750, overlap 571754 571768 CAGACAAAACCAATT CTCGCTTAGC CTTT GCTAAGCGTG TTGCTTATATTTCTC TERM 702 571754 - 571773 + G 86 -12.2 -3.35816 | opp_overlap 571751 571750, overlap 571752 571768 GACAAAACCAATTCT CGCTTAGC CTTT GCTAAGCG TGTTGCTTATATTTC CCA00501 571514 - 572539 + | ABC transporter, ATP-binding protein CCA00502 572552 - 573217 + | ABC transporter, permease protein CCA00503 573214 - 574017 + | YaeC family lipoprotein CCA00504 574069 - 574161 + | hypothetical protein CCA00505 574511 - 574861 + | hypothetical protein gyrB 574865 - 577285 + | DNA gyrase subunit B TERM 703 577571 - 577596 + G 70 -8.3 -3.34043 | TACCCTACATTGGTG CGTATGGCTCA AAAT TGGGCTATGCG TTATCCACTGGTAGA TERM 704 577945 - 577967 + G 86 -10.6 -3.87815 | AGTCATGCCTGGTCC TGATTTCCCC ACA GGGGGGATCA TTTGTGGCGGTGAAG gyrA 577301 - 579793 + | DNA gyrase subunit A tdk 579805 - 580428 + | thymidylate kinase CCA00509 580419 - 581285 + | DNA polymerase III subunit delta' CCA00510 582004 - 581282 - | serine esterase, putative CCA00511 582317 - 583174 + | Sua5/YciO/YrdC family protein CCA00512 583179 - 584153 + | dipeptidase, putative TERM 705 584159 - 584180 + T 88 -5.8 -5.76949 | opp_overlap 584159 AGATATATAAAAAAA GCCCGAAG CATATA CTTCGAGC TTTTTTTTAAAGATA TERM 706 584180 - 584159 - T 100 -8.7 -5.77988 | opp_overlap 584159 AGATATATAAAAAAA GCCCGAAGC ATAT ACTTCGAGC TTTTTTTTAAAGATA CCA00513 585340 - 584219 - | hypothetical protein TERM 707 585538 - 585520 - R 78 -7.6 -4.1552 | GAGCTCTCTAATAAA GTTTTAAT GCC ATTAAAAC TAAAGAGTTATCAAG CCA00514 586735 - 585596 - | hypothetical protein TERM 708 586914 - 586887 - H 78 -10.6 -2.63929 | opp_overlap 586882 586888, overlap 586886 AAAAGAGAGAGTAAG GCTAACCCCACA GAGG TGCGGGGTTAGT TTTCAATTTTTGATT TERM 709 586888 - 586913 + H 100 -11.9 -4.49644 | opp_overlap 586887 586886, overlap 586882 AAAGAGAGAGTAAGG CTAACCCCACA GAGG TGCGGGGTTAG TTTTCAATTTTTGAT ubiA 587725 - 588615 + | prenyltransferase CCA00517 588631 - 589209 + | aromatic acid decarboxylase CCA00518 590099 - 589206 - | hypothetical protein TERM 710 590152 - 590168 + r 75 -10.1 -2.62933 | TTGAACCCGCAACTT CCGCCTT GAC AGGGCGG TGCTCTAACCAATTG TERM 711 590391 - 590414 + r 100 -9.6 -4.43221 | AGAATGATTTTTTTG TCCCCAAAGA TAAG TCTTAGGGGA TTTTCTAGAATATTT TERM 712 590484 - 590462 - R 100 -12.8 -4.31293 | TTATATATTAAGAAA TTAGGGCCAG AAA CTGACCCTAA AAAATGAGAGTTAGG surE 591449 - 590502 - | stationary phase survival protein SurE surE 592530 - 591691 - | stationary phase survival protein SurE TERM 713 591842 - 591826 - G 73 -9.5 -3.11727 | opp_overlap 591822, overlap 591824 AACAACGGTAATATA GTTGTCT AAA AGACAAC GGCATTCCTCAGAAA TERM 714 592574 - 592550 - R 93 -8.7 -4.67048 | opp_overlap 592549 592546 TTACCGGAAAATAAA TCTTGCTATAA AGA TTTTAGCAAGA ATGATTTATAAAAAC CCA00521 593337 - 592594 - | hypothetical protein TERM 715 592862 - 592848 - G 71 -6.4 -4.24948 | overlap 592851 GTACCATATCTAAAA CAGGCA GCA TACCTG CAAACTCTGCTTTAT TERM 716 592944 - 592931 - G 71 -6.7 -4.08216 | CGATGGTGTCCAAAA GCTAC CGCA GTAGC ACCAAGCTCTTTTGC TERM 717 593207 - 593187 - G 70 -5.5 -4.3534 | CCTTAAGCATTAAAA GTAAAGAAA GGC TGTCTTTAC CACCGCTAAGAGCCA CCA00522 593465 - 593950 + | protein translocase subunit, putative TERM 718 594238 - 594248 + F 76 -2.6 -5.44119 | opp_overlap 594230 594238 TTACCAATTTAATTA TTAA AAG TTAA TTTTTTTAAAATAAG CCA00523 594340 - 595182 + | hypothetical protein CCA00524 595185 - 596048 + | hypothetical protein TERM 719 596831 - 596845 + G 70 -2.8 -5.0538 | overlap 596818 596832 TTCGTTTTCTTGGAA CGTAGT TCA ACTACC TTTTTTGAAATAAAC CCA00525 596055 - 596858 + | hypothetical protein TERM 720 596878 - 596902 + T 71 -8.5 -3.0287 | overlap 596877 TTGAACTACAGCTTC GCCCGGTAAAT TTT ATTCTCCGGGC ACTTTTTTTATTACG CCA00526 598272 - 596890 - | MiaB-like tRNA modifying enzyme YliG TERM 721 598212 - 598225 + g 70 -2.5 -5.09426 | opp_overlap 598212 AGCAACCCAAACTAA TAAAA TGAA TTTTA TTTTTTGAAGTTGCC rpmG 598372 - 598530 + | 50S ribosomal protein L33 CCA00528 598579 - 600090 + | permease, putative CCA00529 600093 - 600764 + | ABC transporter, ATP-binding protein CCA00530 602041 - 600767 - | hypothetical protein TERM 722 602131 - 602117 - R 73 -4.2 -5.02074 | opp_overlap 602118, overlap 602105 602118 TTAGGGCTGAAAAAA CCCTAG AAT CTAGGT GTCTGTAAGCACACG TERM 723 602130 - 602118 - R 71 -7.7 -3.60762 | opp_overlap 602118, overlap 602105 602117 TAGGGCTGAAAAAAC CCTAG AAT CTAGG TGTCTGTAAGCACAC CCA00531 602387 - 602238 - | hypothetical protein TERM 724 602290 - 602272 - G 74 -4.6 -4.86385 | opp_overlap 602272 602270 ATTCTTAAAAAGAAA GAAAAGAG TAG CTGTTTTC TAATTTTGTAAAATA rplM 602542 - 602994 + | 50S ribosomal protein L13 TERM 725 603300 - 603289 - g 70 -3 -5.00884 | AGCTTTGTTAAAAAA GAAT GTTG ATTC AAAACAAGAATTAAA rpsI 603008 - 603412 + | 30S ribosomal protein S9 TERM 726 603439 - 603474 + T 91 -5.5 -5.79595 | gap 1, opp_overlap 603439 TTTTACCTATTCAAA GCAAGCG-AAGGAGTT TTTAC AACTCAGTCCGCTTGC TTTTTTATTTTCCAA TERM 727 603474 - 603439 - T 71 -7.7 -3.6682 | gap 1, opp_overlap 603439 TTTTACCTATTCAAA GCAAGCGAA-GGAGTT TTTAC AACTCAGTCCGCTTGC TTTTTTATTTTCCAA CCA00534 604366 - 603515 - | NLP/P60 family protein TERM 728 604015 - 604027 + g 87 -6.3 -5.2166 | opp_overlap 604014 604015, overlap 604001 CTTCCTTATCAAAAG GGAAT TTC ATTCC TTTTTTAACTTCTTC TERM 729 604037 - 604067 + g 84 -12.6 -2.92463 | CATTCCTTTTTTAAC TTCTTCGGGGAGGG TTA CCCTCCCTCGAGAA TCTATCGATAATGGC adk 605044 - 604400 - | adenylate kinase CCA00536 605339 - 606463 + | hypothetical protein CCA00537 606518 - 606940 + | hypothetical protein TERM 730 607898 - 607882 - g 73 -7.3 -4.13728 | TATATATGGCCAAAA GACAACA AAC TGCTGTC GCACATTTAAATACT CCA00538 607059 - 608180 + | hypothetical protein pgl 609020 - 608244 - | 6-phosphogluconolactonase TERM 731 608813 - 608829 + g 74 -3.7 -5.12707 | overlap 608807 608806 608827 AGATCTTAGTAGGAT CGGAGAT CTT ATCTTTG TTTTTTACAATTTCC zwf 610579 - 609044 - | glucose-6-phosphate 1-dehydrogenase TERM 732 609818 - 609784 - G 80 -6.5 -4.68124 | TTAATAGACATAAAA GCTGCATCATATGGT TTTGC ACCATATCACGAAGC ATTCCAGATTTTTCA TERM 733 610851 - 610825 - R 86 -11 -3.21218 | opp_overlap 610818 610830, overlap 610826 610830 ATGCCGCAGGATTAA GGTAATCTGCAT GGC ATGCAGATTACT CATAGACTCTCTATT TERM 734 610850 - 610826 - R 95 -14.5 -2.52516 | opp_overlap 610818 610830, overlap 610825 610830 TGCCGCAGGATTAAG GTAATCTGCAT GGC ATGCAGATTAC TCATAGACTCTCTAT TERM 735 610846 - 610830 - R 77 -9.5 -3.21695 | opp_overlap 610818 610830, overlap 610826 610825 GCAGGATTAAGGTAA TCTGCAT GGC ATGCAGA TTACTCATAGACTCT TERM 736 610830 - 610846 + r 77 -9.5 -3.21925 | opp_overlap 610830 610826 610825, overlap 610818 GCAGGATTAAGGTAA TCTGCAT GGC ATGCAGA TTACTCATAGACTCT CCA00541 612464 - 610878 - | peptide ABC transporter, periplasmic peptide-binding protein, putative TERM 737 611375 - 611400 + gr 70 -4.1 -4.67353 | gap 1 TTGATGTGATATTCA GCTCTTCTAAAG ATT CTTGA-AAGAGC TTTTTCGCTAGATGC TERM 738 611825 - 611835 + gr 85 -6.8 -5.06223 | opp_overlap 611824 GATTTTTCTCAAGAC GCAG CCA CTGC TTTTGTTTAATTTGT gcp_2 613444 - 612410 - | O-sialoglycoprotein endopeptidase argR 613527 - 613970 + | arginine repressor glnP 614016 - 614669 + | amino acid ABC transporter, permease protein glnQ 614659 - 615339 + | amino acid ABC transporter, ATP-binding protein TERM 739 615351 - 615368 + T 84 -11.3 -3.137 | opp_overlap 615351, overlap 615343 615341 ATAGATATTTGTAAA CAGCTGC GTAT GCAGCTG TTCCCTAATGTTAGT TERM 740 615368 - 615351 - T 90 -11.3 -3.60502 | opp_overlap 615351 615343 615341 ATAGATATTTGTAAA CAGCTGC GTAT GCAGCTG TTCCCTAATGTTAGT CCA00546 616752 - 615379 - | hypothetical protein CCA00547 620286 - 616837 - | hypothetical protein TERM 741 619477 - 619462 - G 79 -9 -3.87815 | TTGTAGTTCTATAAA TGAGGG GCTG CCCTCA ACTATGTAAAATATA TERM 742 619912 - 619923 + g 81 -5.8 -5.04175 | TCCTGGATCGAGATG CCCT ACCG AGGG TTTTTCTATAGTTGA CCA00548 621575 - 620283 - | ribonuclease BN family protein TERM 743 620886 - 620910 + g 71 -7 -4.07687 | overlap 620889 620890 GAGAGTTCCTGCTGT GAGCGCCGCG ATTAA CGCGGCTGTC TTTTGCACAGAAACT TERM 744 620890 - 620906 + g 80 -10.8 -3.39908 | overlap 620889 620886 GTTCCTGCTGTGAGC GCCGCG ATTAA CGCGGC TGTCTTTTGCACAGA CCA00549 622467 - 621655 - | methyltransferase, putative TERM 745 622522 - 622501 - R 95 -5.9 -6.32216 | gap 1, opp_overlap 622501 AGAGATAAAAAAAAA GGCA-AGAGA AAC TCTCCATGCC TTTTTATTACTAAAG TERM 746 622501 - 622522 + r 73 -3.7 -5.1356 | gap 1, opp_overlap 622501 AGAGATAAAAAAAAA GGCA-AGAGA AAC TCTCCATGCC TTTTTATTACTAAAG incA 623688 - 622621 - | inclusion membrane protein A TERM 747 623859 - 623878 + H 89 -9.4 -4.17048 | opp_overlap 623858 623856 TTTTTATAAAAATGC TCTCTCAA AGAT TTGAGAGA TTATTTTGAACAAAA rpe 624086 - 624781 + | ribulose-phosphate 3-epimerase CCA00552 624768 - 625325 + | elongation factor P TERM 748 625608 - 625618 + G 75 -5.4 -4.70169 | opp_overlap 625608, overlap 625598 625614 GCCGACTCCCAACAA TCTC CGG GAGA TTTTATTAGCTCTCC accB 625356 - 625856 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 749 626315 - 626304 - g 76 -4.4 -5.03747 | AAATCGCTGAAAAAA TAGG CTTC CCTA TAGTGATTAAGGCTG accC 625856 - 627211 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 750 627229 - 627257 + F 100 -10.4 -5.00234 | overlap 627231 GTTCTTTGTAATTCT CGTGTCTAGAGA TTCGT TCTCTAGACAGG TTTGTTTCTTTTTTA TERM 751 627231 - 627255 + F 83 -11.6 -2.70228 | overlap 627229 TCTTTGTAATTCTCG TGTCTAGAGA TTCGT TCTCTAGACA GGTTTGTTTCTTTTT TERM 752 627956 - 627972 + G 71 -7.3 -3.88787 | CCTGAGGATCTGCAG TGCTCTA TAA TGGAGCA TTTATGGAACTGTAC CCA00555 627383 - 628837 + | hypothetical protein TERM 753 628887 - 628921 + F 77 -9.4 -3.20349 | gap 1, opp_overlap 628882, overlap 628885 TGTAATATGATGTCA GCCGCTTA-ACCTCA ATAGAA TGAGGAATAAGCGGC TATTAAATTTAAAAC TERM 754 629399 - 629388 - g 76 -4.4 -5.02074 | CCACGTGTCAAAAAA TAGC CTAC GCTA CCAAATTTAGAACTA TERM 755 630035 - 630047 + G 88 -7.7 -5.09225 | CAAGGAGAAACTGCG GCGAA TCT TTCGC TTTTTTCAGTGCAAT CCA00556 629042 - 630688 + | hypothetical protein TERM 756 630741 - 630773 + T 100 -17.1 -5.14477 | opp_overlap 630743, overlap 630743 CTGTATTGTATAGAT AACAGTATGCGCCCT TTT AGGGCGCGTACTGTC TTTTTTCACTATATA TERM 757 630771 - 630743 - T 100 -17.5 -3.59698 | opp_overlap 630743 630741 GTATTGTATAGATAA CAGTATGCGCCCT TTT AGGGCGCGTACTG TCTTTTTTCACTATA TERM 758 630743 - 630771 + T 100 -19.7 -4.19215 | opp_overlap 630743, overlap 630741 GTATTGTATAGATAA CAGTATGCGCCCT TTT AGGGCGCGTACTG TCTTTTTTCACTATA CCA00557 631788 - 630802 - | hypothetical protein TERM 759 631561 - 631549 - G 71 -4.1 -4.87291 | overlap 631532 631530 631551 CACTGCAATCAAAAA TGCAC TGA ATGCA ATGGCTCCAAGAACG TERM 760 632195 - 632183 - H 72 -2.7 -5.36965 | GAACATTATAAAAAA TACAT CGT ATGCA TTCGGGTTATGACTC TERM 761 632234 - 632223 - g 73 -2.2 -5.24129 | CTCTTCCAGAAAAAA CAAC TTCT GTCG CCTCTTCGGCTCAGA TERM 762 633648 - 633658 + G 79 -3.2 -5.42514 | AAAACATGATCACTT CTCA GGA TGGG TTTTTTAATTTCTGC TERM 763 634226 - 634204 - g 88 -2.7 -5.9873 | CGAGGACAAAAAAAA GCTCAAAGA GTTAA TCCCTGAAC TTGAGAAGCTACATA TERM 764 639889 - 639863 - g 87 -6.5 -5.19261 | opp_overlap 639863 AAATGGATGAAAAAA TACCTCTGGTG GTTTG CTCCCGAGGTA TCCATCACTCAACAA TERM 765 639982 - 639966 - g 72 -9.5 -2.97017 | AACCTGACAAGCATA GCGAATT AGA AATTCGC GCTCAGGAAGAATTC TERM 766 640532 - 640520 - g 84 -10.5 -3.88498 | opp_overlap 640517 GCGGGACATATCAAA GGCGC TAT GCGCC ATCTACATTGGAAAA TERM 767 642147 - 642131 - g 73 -8.7 -3.67775 | overlap 642128 ATTGCTACGGAAGAA GACCGTA GTC TACGGCC TAACTCACAAGTACT CCA00558 632204 - 642244 + | putative cytotoxin TERM 768 642341 - 642330 - f 82 -3 -5.61596 | opp_overlap 642330, overlap 642337 ACTGTCAGAAAAAAA GTTA CAAC TAAC TATTGCTAGAATGTT TERM 769 643571 - 643549 - g 72 -8.4 -3.57561 | overlap 643551 GTCGAATCTGGGAAA CATGCGGCAA GAT TTGCCACAGG GAAGCCTGGCGTGGT TERM 770 643569 - 643551 - g 75 -9.6 -3.36569 | overlap 643549 CGAATCTGGGAAACA TGCGGCAA GAT TTGCCACA GGGAAGCCTGGCGTG trpB-1 642703 - 643941 + | tryptophan synthase subunit beta TERM 771 643974 - 644017 + F 88 -7.7 -5.0133 | opp_overlap 643975 643977 644015, overlap 643975 643977 TCTTGTAACCAGAAA ACATTTCCATCTTTGTATT TTCCTC AGTACAAAGATGGAAATAC TTTTTTCAAAAAATA TERM 772 644016 - 643975 - f 100 -11.2 -4.5442 | opp_overlap 643975 643974 643977, overlap 643977 644015 CTTGTAACCAGAAAA CATTTCCATCTTTGTATT TTCCTC AGTACAAAGATGGAAATA CTTTTTTCAAAAAAT TERM 773 643975 - 644016 + F 90 -11.2 -3.60316 | opp_overlap 643975 643977 644015, overlap 643974 643977 CTTGTAACCAGAAAA CATTTCCATCTTTGTATT TTCCTC AGTACAAAGATGGAAATA CTTTTTTCAAAAAAT TERM 774 643977 - 644014 + F 95 -13.8 -3.37655 | opp_overlap 643975 643977, overlap 643975 643974 TGTAACCAGAAAACA TTTCCATCTTTGTATT TTCCTC AGTACAAAGATGGAAA TACTTTTTTCAAAAA TERM 775 644014 - 643977 - f 90 -11.6 -3.8823 | opp_overlap 643977 643975 643974, overlap 643975 TGTAACCAGAAAACA TTTCCATCTTTGTATT TTCCTC AGTACAAAGATGGAAA TACTTTTTTCAAAAA TERM 776 644555 - 644517 - f 80 -9.4 -3.65522 | overlap 644524 TAGCTATGCCAACAA GGGGAAATAGGGAAAGCC ATA GGCTACCCCCCCCCCCCC AACGCGAGGAAAGCC TERM 777 645756 - 645777 + F 84 -6.7 -5.13648 | gap 1, opp_overlap 645761, overlap 645761 TTTCAAATTTCATTA GAGAATGGCT GAG AGCCATT-TC TTTTGTTTATGTTTC TERM 778 645761 - 645773 + F 88 -7.7 -5.00611 | opp_overlap 645761, overlap 645756 AATTTCATTAGAGAA TGGCT GAG AGCCA TTTCTTTTGTTTATG TERM 779 645773 - 645761 - f 71 -7.7 -3.55219 | opp_overlap 645761 645756 AATTTCATTAGAGAA TGGCT GAG AGCCA TTTCTTTTGTTTATG TERM 780 646160 - 646186 + G 84 -8 -4.66163 | opp_overlap 646159 646160 CGAGTTCTATATAAT TCCGGAAGAGGT CTC ACATCTTCAGGA TTTTTAAATCGACGT TERM 781 646644 - 646659 + G 71 -6.1 -4.25104 | CCCTAATACAAATGG GCTCG GACATG CGAGC TTTTGCTCAAGCAGA TERM 782 647238 - 647260 + G 70 -9.8 -2.57344 | overlap 647237 GCGGAATTGCTACAG CTCTGCCCAC CAT GTGTGCAGGG GTTGTCGCGGGACTA CCA00561 645812 - 647533 + | hypothetical protein TERM 783 647571 - 647548 - f 81 -8.2 -4.13814 | overlap 647549 AAAAGTGACAAATAA CCTGTAATGC TGTA GCATTACAGC AAATCAAGGGAAAAG TERM 784 647570 - 647549 - f 84 -11.7 -3.06662 | overlap 647548 AAAGTGACAAATAAC CTGTAATGC TGTA GCATTACAG CAAATCAAGGGAAAA TERM 785 647703 - 647722 + G 87 -6.4 -5.32944 | overlap 647686 CTTACTTTTGGAGAG CGAGAATC TATG GCTTCTCG TTTTTTAATTGTCCA TERM 786 647844 - 647812 - g 89 -12.1 -3.64915 | opp_overlap 647811 647810 647814, overlap 647806 647814 647822 TCGCACAAATTACAA GAGGATCAAACGCTT TGA AAGCGATTGATCCTA AATTTAAAGAATTTT TERM 787 647814 - 647842 + G 95 -14.7 -2.64651 | opp_overlap 647812 647806 647814 647822, overlap 647811 647810 GCACAAATTACAAGA GGATCAAACGCTT TGA AAGCGATTGATCC TAAATTTAAAGAATT TERM 788 647842 - 647814 - g 100 -14.7 -3.39897 | opp_overlap 647814 647811 647810, overlap 647812 647806 647822 GCACAAATTACAAGA GGATCAAACGCTT TGA AAGCGATTGATCC TAAATTTAAAGAATT TERM 789 647834 - 647822 - g 73 -7.7 -3.8572 | opp_overlap 647814 647811 647810, overlap 647814 647812 647806 TACAAGAGGATCAAA CGCTT TGA AAGCG ATTGATCCTAAATTT trpR 647589 - 647894 + | Trp operon repressor TERM 790 648632 - 648620 - g 74 -6.3 -4.34402 | opp_overlap 648612 GCTCCTATACGAAAA GGAAT GAA ATTCC CTTCCGTATTTAACA TERM 791 648970 - 648950 - g 70 -2.5 -5.03314 | TGCATTCTGAAAAAA GCTTTCATG GGT CAACAAAGC GCTATTGCTGACGCT trpD 648125 - 649156 + | anthranilate phosphoribosyltransferase TERM 792 649297 - 649279 - g 74 -4.5 -4.89339 | AATCACTTACAAAAA GAGCAGT TTGCC ACAGCTC TAAAGGAACCGGGTT trpC 649147 - 649968 + | indole-3-glycerol phosphate synthase trpF 649958 - 650578 + | N-(5'-phosphoribosyl)anthranilate isomerase TERM 793 651553 - 651563 + G 73 -5.4 -4.65032 | opp_overlap 651550 GCAACAGACAAGGCT GCTT TAG AAGC TTTCTTTCTGCTTTC trpB-2 650575 - 651750 + | tryptophan synthase subunit beta trpA 651743 - 652516 + | tryptophan synthase subunit alpha kynU 652528 - 653805 + | kynureninase TERM 794 654251 - 654275 + G 77 -10.9 -2.87132 | opp_overlap 654251 CTTACACTGCCAACA GCTTTTTGTAG ACA CTATAAAAAGC TGTATAAGCCAAGAC TERM 795 654398 - 654381 - g 70 -2.7 -5.14563 | GCTGTGATTAAAAAA GAACG TCTAAATT CGTTC GAAGTGAGCATGCAA TERM 796 654539 - 654549 + G 72 -3.2 -5.15167 | AATCATTGCTACGGT GACT CAT GGTC TTTTTGTTGGTGATG prsA 653802 - 654707 + | ribose-phosphate pyrophosphokinase CCA00570 655821 - 654997 - | hypothetical protein TERM 797 655697 - 655680 - G 80 -6.3 -4.6955 | opp_overlap 655682, overlap 655682 TATCAATATACAAAA CACGAGA TCTA TCTCGTA ATTGAAGTAACCTAT TERM 798 655822 - 655811 - G 84 -2.2 -5.86061 | GCTGATGAAAAAAAA CACG AAAT CATG AATTCAAGTAGGGAA CCA00571 655845 - 655997 + | hypothetical protein CCA00572 657451 - 656084 - | adenosine/AMP deaminase, putative TERM 799 656772 - 656747 - G 73 -8.3 -3.68073 | opp_overlap 656766 GAGGTTAGGGAAGAA CGACTCGGCTT CATC AAGCCAACTCG CAGCCTCTTCTGAGC TERM 800 657399 - 657365 - G 76 -7.2 -4.17556 | opp_overlap 657397 GAGATCTTTAATAAA CTGACTCGTACAAGGA GTG TCATCGTACAACTCAG ATGTCAACTGTGACA guaA 659019 - 657481 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 801 657771 - 657781 + g 75 -5.4 -4.7889 | opp_overlap 657771 GTTCTTCAATAAAAA TGCT GTC AGCA TTTTTCACTATTTCT TERM 802 657781 - 657771 - G 81 -5.4 -5.06414 | opp_overlap 657771 GTTCTTCAATAAAAA TGCT GTC AGCA TTTTTCACTATTTCT TERM 803 658111 - 658089 - G 73 -10 -2.89191 | CGAGATTTCTAGATA CTTCATCGAA AAC TTCGATAAAG GCGGCTCCTATGACT CCA00574 660108 - 659035 - | inosine-5'-monophosphate dehydrogenase, putative CCA00575 661319 - 660435 - | hypothetical protein CCA00576 661718 - 662230 + | hypothetical protein CCA00577 662231 - 662323 + | hypothetical protein CCA00578 662455 - 663297 + | hypothetical protein TERM 804 663331 - 663352 + F 100 -10.9 -5.37593 | opp_overlap 663331 ATACTTGTTACAAAA CCTCGCAAA TATT TTTGCGGGG TTTTTTCATTTCAAC TERM 805 663352 - 663331 - f 89 -8.7 -4.38154 | opp_overlap 663331 ATACTTGTTACAAAA CCTCGCAAA TATT TTTGCGGGG TTTTTTCATTTCAAC CCA00579 663541 - 663987 + | hypothetical protein CCA00580 664251 - 664922 + | hypothetical protein TERM 806 665703 - 665717 + G 70 -5.7 -4.4261 | opp_overlap 665703 TCAGTTTGTTGAAGA CCATC CTTTC GATGG TTTTGCTATTGGAGG tgt 665038 - 666156 + | queuine tRNA-ribosyltransferase CCA00582 666407 - 666853 + | hypothetical protein CCA00583 667360 - 667827 + | hypothetical protein CCA00584 668009 - 668836 + | hypothetical protein CCA00585 669071 - 668961 - | hypothetical protein TERM 807 669217 - 669266 + G 81 -7.4 -4.63932 | gap 1, opp_overlap 669216 669213 669217, overlap 669219 AGATATCAAAACAAT CGGGATTTCATTAATGCGACAAA ATATG TTTGTC-CTTTATTGAAATCCAG TTTTGTTCGCGGATC CCA00586 669190 - 669741 + | hypothetical protein dsbB 670334 - 669924 - | putative disulfide oxidoreductase CCA00588 671025 - 670327 - | hypothetical protein TERM 808 670557 - 670514 - G 72 -9 -3.30771 | overlap 670518 670520 TCATACTGCTGAGAA TCAACACATTGCATTAATCC CTTA GGATTAATGCTACGCCCTGA ATGCGTTTTCAAATT TERM 809 670551 - 670520 - G 80 -11 -3.29325 | overlap 670518 670514 TGCTGAGAATCAACA CATTGCATTAATCC CTTA GGATTAATGCTACG CCCTGAATGCGTTTT CCA00589 671130 - 671252 + | hypothetical protein TERM 810 672088 - 672108 + G 86 -9.7 -4.07885 | AGATTCATTGTTTTG GGAAGAACG TAC CGTCCTTCC TTTTACAAAAGCATG CCA00590 671234 - 672460 + | hypothetical protein CCA00591 673176 - 672469 - | hypothetical protein TERM 811 672974 - 672961 - G 73 -2.3 -5.22258 | overlap 672962 TAAAGCAAAAGAAAA TCCCT CTAG AGGGT ACCCAACTAACATAG TERM 812 673181 - 673153 - G 71 -9.5 -2.8352 | opp_overlap 673152 673149, overlap 673152 CTCTAAGTTAACAAG CGGAAGGGTCATG TTG CAAGACACTCCCG AATGTTCTCTATAAG CCA00592 673868 - 673161 - | ABC transporter, ATP-binding protein CCA00593 675039 - 674146 - | 5'-methylthioadenosine nucleosidase-related protein CCA00594 675011 - 675235 + | hypothetical protein CCA00595 675901 - 675212 - | hypothetical protein TERM 813 675409 - 675387 - G 79 -8.6 -4.09511 | opp_overlap 675380, overlap 675389 AACATCCCTCTAAAA TAGATATCTT CAC AAGATATCCA AAATTCTAAAGCTTT TERM 814 675407 - 675389 - G 76 -9 -3.6422 | opp_overlap 675380, overlap 675387 CATCCCTCTAAAATA GATATCTT CAC AAGATATC CAAAATTCTAAAGCT TERM 815 675472 - 675460 - G 70 -3.3 -4.99043 | overlap 675461 CCTGCATAAATAAAA CCTGA GAC TCTGG AAGGGCCTGCAGCAT TERM 816 676055 - 676041 - H 76 -2.9 -5.40072 | opp_overlap 676041 CTGCTTGTAAAAAAA TCTTA GAAAT TAAGA GTTATAGCGCTTATG TERM 817 676087 - 676076 - g 72 -4.4 -4.7254 | AGCGCTTATGAAAAA GCAA GTAT TTGC TAGTAAAAAGGTTGG kdsB 676068 - 676832 + | 3-deoxy-manno-octulosonate cytidylyltransferase pyrG 676808 - 678421 + | CTP synthetase TERM 818 678466 - 678502 + G 85 -12.4 -3.14134 | opp_overlap 678472, overlap 678465 678462 TAGGTATAGACTATG GACAGAGGC-GCATAGGC CTT GCCTATGCCGCCTC-GCC TCTGTTCATCAGTCT TERM 819 678497 - 678472 - g 95 -14.1 -2.9294 | gap 1, opp_overlap 678466 678465 678462 TAGACTATGGACAGA GGC-GCATAGGC CTT GCCTATGCCGCC TCGCCTCTGTTCATC CCA00598 678414 - 678905 + | Holliday junction resolvase-like protein CCA00599 679139 - 680476 + | peptide ABC transporter, periplasmic binding protein TERM 820 680530 - 680508 - f 80 -6.4 -4.7629 | GTAGGAAGTGAAAAA TCTTAGCT TTTATGG AGCTAAGA TTGGAAATTATTTTT CCA00600 680595 - 682202 + | peptide ABC transporter, periplasmic binding protein, putative TERM 821 682369 - 682357 - g 82 -4.1 -5.44119 | opp_overlap 682346 CTGAGCGTAAAAAAA CGCTT TTT AAACG TATGACAAGAAAATT TERM 822 682627 - 682578 - g 75 -10.1 -3.17688 | opp_overlap 682594, overlap 682579 682593 CAAGCACTTTACGAA GGCCTTGTTAGAGAACGTTCAGG AAAT CCTGAACTTGCTCTAACAAAGTG CTACACCATATCTGA TERM 823 682626 - 682579 - g 91 -13.6 -2.50291 | opp_overlap 682594, overlap 682578 682593 AAGCACTTTACGAAG GCCTTGTTAGAGAACGTTCAGG AAAT CCTGAACTTGCTCTAACAAAGT GCTACACCATATCTG TERM 824 682594 - 682611 + G 73 -9.9 -3.25942 | opp_overlap 682593 682579 682578 GCCTTGTTAGAGAAC GTTCAGG AAAT CCTGAAC TTGCTCTAACAAAGT oppA 682338 - 683975 + | peptide ABC transporter, periplasmic binding protein CCA00602 684202 - 685185 + | peptide ABC transporter, permease protein oppC_1 685193 - 686101 + | peptide ABC transporter, permease protein oppD 686094 - 686960 + | peptide ABC transporter, ATP-binding protein TERM 825 687018 - 687004 - g 70 -5.8 -4.35042 | GCTATTAGAAAACAA GTTATT CTC AATAAC ATCAACCTTCAATTG TERM 826 687188 - 687173 - g 70 -2.6 -5.1166 | gap 1, overlap 687178 CACCAAAAGCAAAAA CAGTACA GAT TGT-CTG GCAAGACGTGCACTC CCA00605 686953 - 687738 + | peptide ABC transporter, ATP-binding protein CCA00606 688027 - 688782 + | hypothetical protein TERM 827 688983 - 689003 + G 73 -8.3 -3.71991 | opp_overlap 688979, overlap 688986 TTATCCTACAACCCG TGCCTATGG GAG CCATAGTCA TTATTGGGATTTCTA CCA00607 688829 - 690241 + | sodium:sulfate symporter family protein TERM 828 690272 - 690286 + F 89 -8.6 -4.61747 | opp_overlap 690272 ACAACGAGAATACAA CCTTCT GCC AGAAGG TTTTCTCATTGTTGA TERM 829 690286 - 690272 - f 79 -8.6 -3.80597 | opp_overlap 690272 ACAACGAGAATACAA CCTTCT GCC AGAAGG TTTTCTCATTGTTGA TERM 830 690659 - 690670 + G 72 -4.4 -4.66163 | ATCCATCCTGATAGC TCCT TAAT AGGA TTTTTAGATAACGGT CCA00608 690350 - 692005 + | diphosphate--fructose-6-phosphate 1-phosphotransferase CCA00609 692128 - 692940 + | dienelactone hydrolase family protein TERM 831 693668 - 693658 - g 71 -4 -4.91712 | overlap 693662 GGGAATTTAGAAAAA GATA CTT TATC CATAAAGAAGTACCA CCA00610 692950 - 694569 + | diphosphate--fructose-6-phosphate 1-phosphotransferase kdtA 696143 - 694839 - | 3-deoxy-D-manno-octulosonic-acid transferase leuS 698602 - 696140 - | leucyl-tRNA synthetase TERM 832 696735 - 696716 - G 73 -7.2 -4.08692 | overlap 696734 TAAGGGTCCTGAAAA CATTGCAT ACAT ACGCAATG CATCTGCACCAAATT TERM 833 698719 - 698709 - g 78 -2.6 -5.36314 | CAAAAGATTAAAAAA TTTT ATA AAAA CACAACTTGTGCTAT TERM 834 698730 - 698720 - g 79 -5.4 -4.90296 | AAAATTTTATAAAAA CACA ACT TGTG CTATAATCTTGCCCC CCA00613 698658 - 698783 + | hypothetical protein CCA00614 698834 - 699781 + | hypothetical protein TERM 835 700772 - 700785 + G 73 -6.7 -4.23794 | overlap 700760 TTTGTTGGTAGCCTA GCCAA CAAC TTGGC TTTCTCTTACCTTAC TERM 836 701315 - 701305 - g 74 -4 -5.02606 | opp_overlap 701305 TACTAAAGAACAAAA GATT GCT AATC TTTATCATGCAAATC CCA00615 699929 - 701449 + | hypothetical protein TERM 837 701492 - 701455 - T 86 -10.9 -3.22789 | opp_overlap 701452, overlap 701450 701470 AGTAGATTAAGGGAA TACTGTATCTGAAAA TTTCTGGC TTTCCAGATACAGTA GACTCGCTTTCCTAT CCA00616 705884 - 701508 - | hypothetical protein TERM 838 701996 - 702014 + g 83 -6 -5.01497 | opp_overlap 701999, overlap 701999 702004 CAGTATTGAGACCAA CAATCTCT TGA AGAGAGTG TTTTTCTCTCATCAT TERM 839 703921 - 703905 - G 76 -10.9 -2.63073 | opp_overlap 703913, overlap 703904 703902 CGCCTGTAATAACAT GGACTTC CCT GAAGTCC CCTCAGCTTGTATTC ligA 708033 - 706045 - | NAD-dependent DNA ligase LigA CCA00618 709897 - 708041 - | protein kinase, putative TERM 840 709900 - 709914 + r 74 -5.7 -4.75063 | overlap 709898 GCTCACCTTCCATGG GGCAA ACTCC TTGCC TTTTTGAGATTTTCT TERM 841 710034 - 709993 - R 71 -6.7 -4.09374 | opp_overlap 709993 AATATACAAGAATAA CAAAAAAGGACTCCGGG AAAATTCG CCTAAAGTCCTTCTTTG TTTAAAAAGTAAATG CCA00619 710515 - 710150 - | hypothetical protein TERM 842 710301 - 710273 - G 74 -3.8 -5.1167 | overlap 710275 AACCCAAGATAAAAA GAGGATACCCAA AACAA TTGCGCATCCAC CTGCCAACACTGAAG TERM 843 710657 - 710624 - R 100 -10.3 -4.6951 | opp_overlap 710627, overlap 710627 ATTACCGAAAAGAAA TAATCTTGCGGCGGA TAAT CCCGCTGCAAGATTT TGTTTATTTAAATGA TERM 844 710654 - 710627 - R 100 -12 -4.44301 | opp_overlap 710627, overlap 710624 ACCGAAAAGAAATAA TCTTGCGGCGGA TAAT CCCGCTGCAAGA TTTTGTTTATTTAAA TERM 845 710627 - 710654 + r 100 -13.5 -5.18866 | opp_overlap 710627 710624 ACCGAAAAGAAATAA TCTTGCGGCGG ATAATC CCGCTGCAAGA TTTTGTTTATTTAAA CCA00620 711157 - 710789 - | hypothetical protein TERM 846 711240 - 711275 + r 73 -9 -3.28924 | gap 1, opp_overlap 711240 711231, overlap 711251 ATATAACTTGACAAA GCGCCT-CACAGGCTTG AAA CTAGCTTGTGAAGGCAC TTGTAAAAGACAGTC TERM 847 711275 - 711240 - R 82 -9 -3.94381 | gap 1, opp_overlap 711240 711251, overlap 711231 ATATAACTTGACAAA GCGCC-TCACAGGCTTG AAA CTAGCTTGTGAAGGCAC TTGTAAAAGACAGTC TERM 848 711443 - 711410 - R 100 -9.7 -5.25803 | gap 1, opp_overlap 711410 AATTTCCATAAAAAA GCCGCTCTTATGACCT TAA AGATCAC-AGAACGGC TGTTAATCACTTGTG TERM 849 711527 - 711541 + r 80 -7.2 -4.4715 | AACATCCTGACTATT TCTGAT CAG ATCAGA TTTTCTAGCTTGGAA CCA00621 711835 - 711509 - | hypothetical protein TERM 850 711565 - 711542 - G 80 -11.2 -2.87468 | TCTGATCAGATCAGA TTTTCTAGCT TGGA AGCTAGAAAA TACACCATAGCTCCA CCA00622 712356 - 711925 - | hypothetical protein TERM 851 712136 - 712126 - G 79 -6.8 -4.54047 | TGATCCCAGAGAAAA TGCC AAA GGCA TCAGGCATATACAGC CCA00623 713944 - 712436 - | hypothetical protein TERM 852 713381 - 713371 - G 78 -4 -5.24129 | CCTCTTCATAAAAAA GAAT CGT ATTC AGAGCTTCTATCGTT TERM 853 714866 - 714846 - g 70 -2.5 -5.05782 | opp_overlap 714862, overlap 714848 ATTTATGCGAAAAAA CTCTCCA TCATCTC TGGAGGG CCAACCCTATTCTCT CCA00624 714234 - 716759 + | polymorphic outer membrane protein G family protein/autotransporter TERM 854 716771 - 716796 + T 79 -10.3 -2.82623 | opp_overlap 716769 CTAATTCCAACCACC TCCCCTGCCCC ATCC GGGGCAGGGCC TACTTATGCCCCACA TERM 855 716859 - 716834 - T 100 -8.3 -6.36459 | CGCAATAAAAAAAAA GACCCTCTATC ATAT GAGAGAGGATC TAAAACAATAGATAA clpB 719489 - 716895 - | ATP-dependent Clp protease, subunit B TERM 856 717827 - 717812 - G 76 -7.6 -4.17316 | opp_overlap 717800 717812 ACTCTTCTAAAACAA GAAGCT TTTC AGCTTC TCCTTCCAACATCTT TERM 857 718032 - 718062 + g 100 -7.1 -5.67711 | AACACGTTCTGCTTC TTCTTCAGAAAAT TTCAT ATTTTCTAAAGAA TTTTTCTTTTCTTTA TERM 858 718721 - 718709 - G 70 -7.7 -3.64487 | opp_overlap 718708 CCACATCTTTAAGAA CGCTT TTT AAGCG CTCTTCAAATTCCCC TERM 859 718844 - 718855 + g 73 -5.8 -4.57073 | GCAGAGCTAATCCCT CAGC AATT GCTG TTTTTCCCACGCCTG CCA00626 720341 - 719541 - | ABC transporter, periplasmic substrate-binding protein, putative CCA00627 721117 - 720371 - | ABC transporter, ATP-binding protein TERM 860 720854 - 720834 - G 70 -2.5 -5.10033 | CGAACAGAAAGAAAA TCAAAAAGG GCG CCACCTTGA AATACCATACCAATG CCA00628 721917 - 721126 - | ABC transporter, permease protein, putative hemL 723261 - 721948 - | glutamate-1-semialdehyde aminotransferase CCA00630 723922 - 723353 - | hypothetical protein TERM 861 723762 - 723751 - G 70 -3 -5.1166 | opp_overlap 723751, overlap 723745 TATCAAAAGTAAAAA TATC ATCA GATA TTTCTAAACCTAATG TERM 862 723815 - 723790 - G 85 -9.1 -4.18197 | gap 1, opp_overlap 723793, overlap 723793 ATGTCTTATTTAAAA TGAGCCCGAACG AAC CGTTCAGGCT-A TGCTCACATAATAAA TERM 863 723813 - 723793 - G 91 -13.3 -3.11208 | opp_overlap 723793, overlap 723790 TCTTATTTAAAATGA GCCCGAACG AAC CGTTCAGGC TATGCTCACATAATA TERM 864 723793 - 723813 + g 77 -11.1 -2.80113 | opp_overlap 723793 723790 TCTTATTTAAAATGA GCCCGAACG AAC CGTTCAGGC TATGCTCACATAATA CCA00631 724379 - 723939 - | hypothetical protein rpiA 725077 - 724376 - | ribose-5-phosphate isomerase A TERM 865 724583 - 724571 - G 85 -5.5 -5.24531 | opp_overlap 724571 ATTGGTGATAAAAAA TCCCC CAC GAGGA TTCTTTCTTAAATTT CCA00633 726362 - 725268 - | hypothetical protein CCA00634 727776 - 726526 - | hypothetical protein CCA00635 727793 - 727885 + | hypothetical protein CCA00636 729226 - 727991 - | hypothetical protein CCA00637 729451 - 729329 - | hypothetical protein CCA00638 729924 - 729643 - | hypothetical protein CCA00639 732019 - 730349 - | hypothetical protein TERM 866 731497 - 731481 - G 73 -6.7 -4.24075 | ATTGAGGAAGATAAA TTAAATG CAG CATTTAA AATAGAAGTCGATTC TERM 867 732874 - 732860 - g 70 -5.6 -4.386 | CAATCCCCTATAAAA GCTCAG GCG CTGGGC GGCCCACAAACCATC CCA00640 732383 - 733138 + | hypothetical protein TERM 868 733178 - 733199 + F 74 -3 -5.32699 | overlap 733186 CTTGGCTTTTTCTTA GAACTTCC CTTATA GTAAGTTC TTTTTTGCTATTTCA pepF 733232 - 735061 + | oligoendopeptidase F TERM 869 735103 - 735077 - f 79 -5.2 -5.03713 | overlap 735078 AACAACTAAAGAAAA GTAGCACTTGAT ATT ATTAAGTGCTAA AATCATTGCCAAAAA TERM 870 735102 - 735078 - f 77 -8.7 -3.59787 | overlap 735077 ACAACTAAAGAAAAG TAGCACTTGAT ATT ATTAAGTGCTA AAATCATTGCCAAAA groES 735193 - 735501 + | co-chaperonin GroES TERM 871 736674 - 736644 - g 82 -4.1 -5.40464 | gap 1, opp_overlap 736654 TACGACAAAGAAAAA CTCCAAGAACGTTT AGCT AAACTTTCC-GGAG GCGTAGCTGTAATCC groEL 735552 - 737186 + | chaperonin GroEL TERM 872 737223 - 737258 + F 100 -9.8 -5.86976 | gap 1, opp_overlap 737223 737248, overlap 737245 TCTCTAATATTATAA GGTCTCCTTTCATC-CA TCT TGAGAAGAAAGGGGGCC TTTTTTATTTTCTAA TERM 873 737341 - 737351 + G 70 -2.6 -5.11112 | GCATGTTTAAACTTT TAAA GAA TTTA TTTTTATTAGCATTT TERM 874 737910 - 737889 - g 74 -5.2 -4.69415 | AGCAATATAAACAAA CAAGGTTC TCTACC AAACCTTG CAACAGCGCTAACCT CCA00644 737328 - 738131 + | hypothetical protein TERM 875 738159 - 738135 - Tf 72 -5.1 -4.72272 | TTTTTTCATTAAAAA GAACAAATAAT AAA ATTCTTTGTCC CCCTTCCCACCTCAT CCA00646 738714 - 738595 - | hypothetical protein CCA00645 738381 - 738779 + | hypothetical protein CCA00647 738878 - 739687 + | hypothetical protein CCA00648 740615 - 739842 - | biotin apo-protein ligase-related protein TERM 876 740179 - 740168 - G 73 -2.2 -5.31456 | gap 1, overlap 740169 740172 TTAAGTTAGAAAAAA CCAGC GGC GC-GG CGCGAACCCCTACCG TERM 877 740901 - 740914 + G 90 -5.3 -5.63645 | overlap 740913 CGTCTTAACCCGTTA TACCA TTTT TGGTA TTTTTTCTCTTTTCC CCA00649 740749 - 741765 + | hypothetical protein TERM 878 742376 - 742362 - g 73 -8.6 -3.78934 | CTGCGCGCATAAGAA TACCCT ATA AGGGTA CGGTCATCGTTATCA TERM 879 742474 - 742462 - g 74 -6.3 -4.41844 | overlap 742472 AAAATGGTCAGAAAA TCCTA ATT TAGGA AAATACTTCCAAGTC TERM 880 742856 - 742825 - g 72 -9.5 -3.06009 | opp_overlap 742820 GAAAATCTGTGAAGA TCCCTTCCTTCTC GCTAGA GAGATGGAAGGAA TAGGATTTAAAACTG TERM 881 743879 - 743858 - g 85 -8.7 -4.40561 | opp_overlap 743872 TTTTTCCAAAAAGAA GATCCTCAG GAAG CTGTGGATC ACATTGTCCAACTAG CCA00650 742283 - 744490 + | RecD/TraA family helicase metG 746156 - 744504 - | methionyl-tRNA synthetase TERM 882 744742 - 744728 - G 83 -5 -5.30686 | AACACGCACAAAAAA GTATAG CCT CTACAC GATGCGCGAATCCTT CCA00652 746452 - 746156 - | hypothetical protein gmk 747063 - 746449 - | guanylate kinase rnhB 747708 - 747070 - | ribonuclease HII TERM 883 747596 - 747576 - G 70 -8.2 -3.61894 | opp_overlap 747578, overlap 747578 AAGCTCCTGCAACAA CAGGCCCC GCTAA GGGGCCTC TTCCGACCTCATCTA TERM 884 747578 - 747594 + g 78 -10.8 -3.03441 | opp_overlap 747576 747578 GCTCCTGCAACAACA GGCCCC GCTAA GGGGCC TCTTCCGACCTCATC TERM 885 747594 - 747578 - G 80 -10.8 -3.38812 | opp_overlap 747578, overlap 747576 GCTCCTGCAACAACA GGCCCC GCTAA GGGGCC TCTTCCGACCTCATC rplS 748131 - 747766 - | 50S ribosomal protein L19 trmD 749222 - 748155 - | fused tRNA (guanine-N(1)-)-methyltransferase/uncharacterized domain-containing protein TERM 886 748351 - 748372 + g 79 -9.5 -3.62224 | overlap 748352 TTTAACCCTACTTCT TGCAAATGG AGAA CCATTTGCG TTCTTCCAGGGATCT TERM 887 748352 - 748371 + g 77 -10.8 -2.77013 | overlap 748351 TTAACCCTACTTCTT GCAAATGG AGAA CCATTTGC GTTCTTCCAGGGATC rpsP 749596 - 749237 - | 30S ribosomal protein S16 ffh 750930 - 749587 - | signal recognition particle TERM 888 750573 - 750596 + g 72 -4.5 -4.68506 | opp_overlap 750569 750573 CCTCTAGAGCATAAG CGGCGAGCT TAGCGC AGGTCGTCG TTTTTCCCGTTCCTT TERM 889 750653 - 750630 - G 77 -6 -4.55128 | opp_overlap 750630 750633, overlap 750633 AGCCGCAAAGTAAAA TGACTCCAGG ATTC CCTGAAGTAA TTAAATCGGCCTTAC hemK 751808 - 750957 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase prfA 752871 - 751786 - | peptide chain release factor 1 rpmE2 753619 - 753293 - | 50S ribosomal protein L31 type B TERM 890 754056 - 754045 - g 78 -3 -5.52384 | opp_overlap 754040 754045 TCTCTATCAAAAAAA GATA TTGA TATC TTTTGTTTGAACCCA CCA00662 753703 - 754452 + | hypothetical protein TERM 891 756278 - 756268 - g 70 -5.4 -4.47007 | overlap 756272 GAAAAAGCAAAACAA GAAG CCT CTTC AGAAGACCGGCCTTA CCA00663 754762 - 756651 + | signal peptidase I, putative TERM 892 756688 - 756645 - T 100 -13.6 -5.1286 | gap 1, opp_overlap 756653 756656 756687, overlap 756649 GAAAAATGACAAAAA GAAATAAAGAAGATTCTCTAT TTT ACAGAGAATCTTCTTTATC-C ATGAAGAAATGGTAT TERM 893 756685 - 756649 - T 100 -17.7 -5.00267 | opp_overlap 756653 756656, overlap 756645 AATGACAAAAAGAAA TAAAGAAGATTCTCTAT TTT ACAGAGAATCTTCTTTA TCCATGAAGAAATGG TERM 894 756653 - 756681 + T 95 -11.9 -3.91897 | opp_overlap 756649 756645, overlap 756656 ACAAAAAGAAATAAA GAAGATTCTCTAT TTT ACAGAGAATCTTC TTTATCCATGAAGAA TERM 895 756656 - 756678 + T 78 -7.8 -4.09117 | opp_overlap 756649 756645, overlap 756653 AAAAGAAATAAAGAA GATTCTCTAT TTT ACAGAGAATC TTCTTTATCCATGAA ileS 759838 - 756707 - | isoleucyl-tRNA synthetase TERM 896 758311 - 758323 + g 74 -6.3 -4.45259 | CATAGGGAACTCGTT GGAAA GTC TTTCC TTCTTTTTCAACTTT TERM 897 760456 - 760472 + H 70 -3.7 -4.85782 | opp_overlap 760447, overlap 760458 CAATTATTAGACGCT GTCTTAA AAC TTAAGCC TTTCTTTTTCAAGAA CCA00665 760599 - 761096 + | hypothetical protein CCA00666 762392 - 761100 - | phoH family protein TERM 898 762458 - 762444 - H 77 -5.8 -4.68479 | ATAAAATAATGAAAA TACTTA AAA TAAGTA CTCAAAAAATCTGTA TERM 899 762655 - 762643 - g 82 -4.1 -5.43866 | CAATTGTCAAAAAAA CAGAG CTG CTCTA CAATGACGTTAAGCA CCA00667 762619 - 763440 + | hypothetical protein CCA00668 763587 - 764816 + | hypothetical protein TERM 900 765090 - 765062 - T 100 -14.8 -3.87815 | overlap 765089 CTCTACTCTTAGAAA GGTTTGTAAGCT GAAGA AGCTTACAAACC TAAAACAGGAAGCGT cydB 766191 - 765130 - | cytochrome d oxidase, subunit II TERM 901 765348 - 765330 - G 73 -10.4 -2.75863 | overlap 765327 GGAAAATCAAAGTCA CTGTTGAT AAT ATCAACAG AAGTAAATGCAACGA cydA 767534 - 766194 - | cytochrome d oxidase, subunit I TERM 902 767246 - 767229 - G 81 -5.5 -5.08601 | overlap 767230 CGATTCCAAGAAAAA GGCGAAG ATAC CTTCGCT CCCTAAAAGGGTTCC TERM 903 767245 - 767230 - G 76 -9 -3.64438 | overlap 767229 GATTCCAAGAAAAAG GCGAAG ATAC CTTCGC TCCCTAAAAGGGTTC TERM 904 768026 - 768042 + G 77 -8.1 -4.1552 | opp_overlap 768039 GGAGGAAGTTTGTTA TTGATCT ACA AGATCAA TTTATTGAACACCTC TERM 905 768348 - 768367 + G 71 -7.2 -3.81089 | opp_overlap 768348 GGCTCTAGGAGCAAG TCAACGTA CCGA TGCGTTGA TTATTACTGTATCTG CCA00671 767734 - 768528 + | hypothetical protein CCA00672 768510 - 769793 + | hypothetical protein CCA00673 769998 - 771344 + | lipid A biosynthesis lauroyl acyltransferase TERM 906 771352 - 771366 + F 83 -2.2 -5.77853 | AATCTTAAAGGGAAG TAAAAA ATT TTTTTG TTTTTTTTCCCAATT CCA00674 771398 - 771727 + | hypothetical protein TERM 907 771736 - 771758 + T 84 -12.1 -2.85378 | opp_overlap 771736 TATTTAAAATGAGAA GCATCAGCT TATTT AGCTGATGC TGTGATGATATCATT TERM 908 771758 - 771736 - T 91 -12.1 -3.6943 | opp_overlap 771736 TATTTAAAATGAGAA GCATCAGCT TATTT AGCTGATGC TGTGATGATATCATT pyk 773189 - 771744 - | pyruvate kinase TERM 909 777991 - 778011 + G 72 -9.1 -3.33708 | overlap 777992 778008 ATCATAAAAAAGTTT TCTCTAAAG ACA CTTTAGAGG TTCGTCTCTCGATTC TERM 910 777992 - 778010 + G 72 -10.4 -2.59743 | overlap 777991 778008 TCATAAAAAAGTTTT CTCTAAAG ACA CTTTAGAG GTTCGTCTCTCGATT uvrA 773526 - 778946 + | excinuclease ABC subunit A pknD 781733 - 778941 - | serine/threonine-protein kinase TERM 911 780600 - 780589 - G 72 -4.4 -4.66163 | overlap 780595 780596 ATGTGCAGCCAAAAA CCAT AACC ATGG TAAAAATCCCCATGA TERM 912 781632 - 781619 - G 71 -6.7 -3.99592 | opp_overlap 781618 ACTCATTATCAGAAA GATCC TCAC GGATC CTCTTAAGAGCAACC valS 784576 - 781754 - | valyl-tRNA synthetase TERM 913 782645 - 782628 - G 76 -7.1 -4.28067 | opp_overlap 782628, overlap 782622 782644 TCAAGAATATAGAAA TCTTCTA ACCC TAGAAGA TCCTTATCTATACCA CCA00679 785123 - 784635 - | hypothetical protein atpK 785499 - 785074 - | V-type ATP synthase subunit K atpI 787585 - 785630 - | V-type ATP synthase subunit I CCA00682 788202 - 787576 - | V-type ATP synthase subunit D atpB 789503 - 788187 - | V-type ATP synthase subunit B atpA 791283 - 789508 - | V-type ATP synthase subunit A TERM 914 790208 - 790188 - G 72 -10.5 -2.70022 | overlap 790164 790187 TTGATGCTAGATAAG CTGGAAAAG CTT CTTCTCCAG GAATCTCTTCTAATC TERM 915 790400 - 790380 - G 71 -7 -3.99062 | opp_overlap 790370, overlap 790383 AAGAGGTATTACAAA TAATGCAT GTTCT ATGCATTA AAGACTCCCCTGTAT CCA00685 792077 - 791277 - | hypothetical protein CCA00686 792751 - 792125 - | V-type ATP synthase subunit E TERM 916 792907 - 792929 + G 72 -9.2 -3.28712 | TTTCTGATTGCTAGT TTTTCGCTCG CAG CAAGCGAAAA TTCTCAAACACAAAG CCA00687 792868 - 793626 + | hypothetical protein CCA00688 794049 - 793639 - | hypothetical protein tal 795054 - 794071 - | transaldolase B rpoC 799355 - 795174 - | DNA-directed RNA polymerase subunit beta' TERM 917 795209 - 795227 + g 74 -4.6 -4.91459 | opp_overlap 795212, overlap 795212 CGCTTTCAAAGTCGA AAACAAGA TCC TCTTGTTC TTTTTCTAAGTATTG TERM 918 795212 - 795224 + g 77 -6.3 -4.5448 | opp_overlap 795212, overlap 795209 TTTCAAAGTCGAAAA CAAGA TCC TCTTG TTCTTTTTCTAAGTA TERM 919 795224 - 795212 - G 71 -6.3 -4.24002 | opp_overlap 795212 795209 TTTCAAAGTCGAAAA CAAGA TCC TCTTG TTCTTTTTCTAAGTA rpoB 803141 - 799383 - | DNA-directed RNA polymerase subunit beta TERM 920 800047 - 800059 + g 71 -4.8 -4.53705 | ACACCTTTGTTTCCA TGGC GTCCA GCCA TTTTATCTCCAACTT TERM 921 800065 - 800079 + g 71 -4.2 -4.85782 | overlap 800066 CGTCCAGCCATTTTA TCTCCA ACT TGGAGC TTTCTTTTTGAAGCA TERM 922 803083 - 803103 + g 95 -4.7 -5.76949 | ATTTCAATAAGATTT GGAAGATCT AAG ATGTCTTCC TTTTTTTTGACGCTA TERM 923 803272 - 803242 - R 100 -13.6 -5.35459 | opp_overlap 803247, overlap 803247 ATACATGATAAAAAA GAAAAGAAAAATCT TAT AGATTTTTCTTTCC CATAGATTACAAGCC TERM 924 803267 - 803247 - R 100 -9.9 -5.49579 | opp_overlap 803247, overlap 803242 TGATAAAAAAGAAAA GAAAAATCT TAT AGATTTTTC TTTCCCATAGATTAC TERM 925 803247 - 803267 + r 82 -9.9 -3.6215 | opp_overlap 803247 803242 TGATAAAAAAGAAAA GAAAAATCT TAT AGATTTTTC TTTCCCATAGATTAC rplL 803671 - 803279 - | 50S ribosomal protein L7/L12 TERM 926 803346 - 803357 + g 74 -4.4 -4.88405 | GTATCTTCAGCATCA GACT TAGA AGTC TTTTCTTTAACAGTT rplJ 804225 - 803713 - | 50S ribosomal protein L10 TERM 927 804035 - 804062 + g 87 -5 -5.49729 | overlap 804050 TCTATCTCAAAACCT GAATTTTCTATA GCTT TGAAGAAAATTC TTTTTTTCAATACTT rplA 804937 - 804239 - | 50S ribosomal protein L1 rplK 805385 - 804960 - | 50S ribosomal protein L11 nusG 806040 - 805492 - | transcription antitermination protein NusG secE 806290 - 806045 - | preprotein translocase subunit SecE TERM 928 806212 - 806241 + g 73 -10.1 -2.81191 | opp_overlap 806219, overlap 806211 806219 TTTTTTTAATTTCAT CTAGAAAGCCAGC TCTC GCTTGCTTTTTAG CTTTAGAGATTTTTT TERM 929 806219 - 806234 + g 72 -4.6 -4.81249 | opp_overlap 806219, overlap 806212 806211 AATTTCATCTAGAAA GCCAGC TCTC GCTTGC TTTTTAGCTTTAGAG TERM 930 806433 - 806403 - R 100 -11.3 -4.26188 | opp_overlap 806403 GCTACACACCCAAAA GCATGACTAAGAC GGGGT GTCTCAATCATGC TTATAAAATTACCTA TERM 931 806458 - 806442 - R 72 -5.9 -4.3898 | opp_overlap 806442 ATCATGCTTATAAAA TTACCTA TAT TAGGCAA TGATTTTTGAGATTG tuf 807635 - 806451 - | elongation factor Tu TERM 932 807588 - 807605 + g 71 -6.3 -4.2528 | AACGTGTCCAATGGT CCCTATA TTGA TATGGGG TTTATTACGTTGAAA infA 808049 - 807828 - | translation initiation factor IF-1 CCA00700 808350 - 809336 + | hypothetical protein CCA00701 809339 - 809788 + | hypothetical protein TERM 933 811093 - 811080 - g 73 -6.7 -4.26076 | GCATCTTCAGCAAAA GATGG CAGA CCATC AGAGAGCTTCACAAA TERM 934 811323 - 811303 - g 86 -10.5 -4.07133 | overlap 811306 GAGGGCTACAAACAA CAACTAGAG CAA CTCCAGTTG AAAATAACAGCTCTT TERM 935 811320 - 811306 - g 71 -6.4 -4.15703 | overlap 811303 GGCTACAAACAACAA CTAGAG CAA CTCCAG TTGAAAATAACAGCT TERM 936 811805 - 811783 - g 73 -2.1 -5.24129 | gap 2, overlap 811785 GCGTTTGATAAAAAA GCTCTCAAGAA AAC TTCT-G-GAGC CGACGTAGACGCAGT CCA00702 810214 - 811950 + | hypothetical protein TERM 937 811959 - 811982 + T 93 -8.1 -5.55769 | AAAATAAACCCCCAA GGCCTCGCA CACATT TGTGGGGCC TTTTTTATTATAAAG CCA00703 812350 - 812129 - | hypothetical protein CCA00704 812576 - 812397 - | hypothetical protein TERM 938 812853 - 812823 - g 70 -5.5 -4.43911 | opp_overlap 812823, overlap 812851 AAATCTTAATTAAAA GAGGTTCCTATCA TGTTT TTATAGCAACCTC TTTCGGCAAAAGAAC CCA00705 812747 - 812896 + | hypothetical protein CCA00706 813481 - 812882 - | hypothetical protein TERM 939 813583 - 813564 - H 89 -7.2 -5.26875 | overlap 813566 TTCTGAATTAAAAAA TACATCCT CTTT AGGATGCA CAAAGGAAACTTAAC TERM 940 813581 - 813566 - H 78 -7.6 -4.26777 | overlap 813564 CTGAATTAAAAAATA CATCCT CTTT AGGATG CACAAAGGAAACTTA CCA00707 813864 - 815729 + | hypothetical protein TERM 941 815744 - 815730 - T 71 -8.6 -3.09933 | TGGCAACCCACCTAA TCTCAG ATT CTGAGA ACAACTTTACTTAGG CCA00708 816233 - 815883 - | hypothetical protein CCA00709 817976 - 816306 - | hypothetical protein TERM 942 818287 - 818262 - R 91 -2.6 -6.12328 | opp_overlap 818262 AGAACATAAAAAAAA GTATCTGTAA AGAAAA TCGCAGATAC TTCTATAAGATCGCC CCA00710 818848 - 818318 - | hypothetical protein TERM 943 818391 - 818411 + g 73 -6.9 -4.20888 | overlap 818392 TCCTTATCTGTTTTC TCTTTTTGC CAA GCAAGAAGG TCTTTTTTAAATTCC CCA00711 819466 - 819152 - | hypothetical protein dapA 820467 - 819598 - | dihydrodipicolinate synthase lysC 821800 - 820478 - | aspartate kinase TERM 944 821024 - 821014 - G 70 -3.2 -4.85599 | TGGAGGTTACAAAAA TAGG AAT CCCA GCACGCACACACGGA TERM 945 821673 - 821657 - G 71 -3.7 -4.88495 | opp_overlap 821657 AGAGACACAACAAAA CATATCT AAT AGATCTG TAATTCCCGCTACAG asd 822792 - 821788 - | aspartate-semialdehyde dehydrogenase TERM 946 822021 - 822060 + g 100 -22.6 -3.1355 | opp_overlap 822025 822050, overlap 822025 GCTTATATGTCCCTG GAAATTCTTCATTCCTAC GATG GTAGGAATGAAGAATTTC TTCAATATCCATAGA TERM 947 822025 - 822056 + g 100 -17.6 -4.23213 | opp_overlap 822025 822050, overlap 822021 ATATGTCCCTGGAAA TTCTTCATTCCTAC GATG GTAGGAATGAAGAA TTTCTTCAATATCCA TERM 948 822056 - 822025 - G 100 -17.6 -3.53563 | opp_overlap 822025 822021, overlap 822050 ATATGTCCCTGGAAA TTCTTCATTCCTAC GATG GTAGGAATGAAGAA TTTCTTCAATATCCA dapB 823718 - 822978 - | dihydrodipicolinate reductase TERM 949 824213 - 824230 + G 84 -6.9 -4.98672 | opp_overlap 824209, overlap 824212 GCTACACAAATGCGC GCCGTAG ATGA CGACGGC TTTTCTATTTTTCCC TERM 950 824410 - 824421 + G 74 -4.4 -4.99134 | overlap 824415 TAGTAACGCTCTCGC CATC TCAA GATG TTTTTGGTTTACCGT phhA 823928 - 824761 + | phenylalanine 4-monooxygenase CCA00717 824742 - 825413 + | integral membrane protein TERM 951 826414 - 826404 - g 73 -5.4 -4.56775 | opp_overlap 826404 ACTCCTGTGCAAAAA GATG GTT CATC TTGTGGGATGTGGGT CCA00718 825501 - 826580 + | hypothetical protein CCA00719 826588 - 827436 + | short chain dehydrogenase, putative TERM 952 827661 - 827700 + T 72 -9.5 -2.75069 | gap 1, opp_overlap 827670, overlap 827660 827658 TTTAATTGGTATCAC CTGGCATAATTGCACATC AAGTA GA-GTGCAATTACGCTAG CTCTTCTTTCCTAAA CCA00721 828081 - 827692 - | hypothetical protein CCA00722 828549 - 828196 - | hypothetical protein TERM 953 828415 - 828471 + g 100 -22.5 -3.24924 | opp_overlap 828417, overlap 828415 828417 GCAACGATACGACCA CACCTTCGCACTCCCATGCACAAGCAC TTC GTTCTTATGCATGGGAGTGCGAAAGTA TGTTATGCGTGCAGC TERM 954 828415 - 828473 + g 100 -16.3 -3.35996 | gap 2, opp_overlap 828417, overlap 828415 828417 GCAACGATACGACCA C--ACCTTCGCACTCCCATGCACAAGCAC TTC GTTCTTATGCATGGGAGTGCGAAAGTATG TTATGCGTGCAGCTG TERM 955 828417 - 828469 + g 100 -25.1 -3.18945 | opp_overlap 828417, overlap 828415 828415 AACGATACGACCACA CCTTCGCACTCCCATGCACAAGCAC TTC GTTCTTATGCATGGGAGTGCGAAAG TATGTTATGCGTGCA TERM 956 828469 - 828417 - G 100 -29.5 -2.85378 | opp_overlap 828417 828415 828415 AACGATACGACCACA CCTTCGCACTCCCATGCACAAGCAC TTC GTTCTTATGCATGGGAGTGCGAAAG TATGTTATGCGTGCA TERM 957 828623 - 828601 - H 83 -4.9 -5.45802 | opp_overlap 828604 TTTGTAAAATAAAAA TAAGTTAGC CAAAT GCTTACTTA TAAGATCTCTCCCTC TERM 958 829921 - 829946 + G 79 -11.1 -3.21622 | TGGACTACCGGCAGT GGGCAAGACCT TATT GGGTCGTGCCC TTGCTAACTATCTAT aroA 828613 - 829953 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroK 829889 - 830410 + | shikimate kinase aroC 830407 - 831486 + | chorismate synthase aroB 831483 - 832622 + | 3-dehydroquinate synthase TERM 959 832894 - 832863 - g 72 -9 -3.39327 | gap 1, opp_overlap 832851, overlap 832876 TCTGGATATTGATAA GGAT-TTTCCTAAAG AAG CTTTAAGAAAGATCC GAAACCAATATCCTA aroDE 832603 - 834036 + | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein CCA00728 834088 - 834879 + | hypothetical protein TERM 960 835536 - 835508 - g 78 -7.4 -4.386 | overlap 835509 CAACTCTGCACAAAA TGCCAACAATGC TATAG GCATTGCCGGCG AGATCAACGATTACA TERM 961 835535 - 835509 - g 79 -10.9 -3.22678 | overlap 835508 AACTCTGCACAAAAT GCCAACAATGC TATAG GCATTGCCGGC GAGATCAACGATTAC CCA00729 834984 - 836339 + | hypothetical protein CCA00730 836367 - 836954 + | hypothetical protein arcD 836964 - 838424 + | amino acid permease TERM 962 838442 - 838467 + F 100 -13.3 -5.72053 | opp_overlap 838428 838437 ATCCCAATCACCCTT TGGGAGGGGCC TTCG GGTCCCTCTCA TTTTTTCTTTAGTTC TERM 963 838772 - 838756 - g 72 -3.6 -5.0538 | TTTTACTGGAAAAAA GGCGAG TAAAC CTCCCC TTGCGGACTTAGGAA TERM 964 839532 - 839500 - g 100 -15 -5.31091 | opp_overlap 839500 CAGAATAAAAGAAAA CCTTTGGTTCCTAG GAGCT CTAGGATCCAAAGG TCTACTGTATCACGG TERM 965 839500 - 839532 + G 95 -15.7 -2.88999 | opp_overlap 839500 CAGAATAAAAGAAAA CCTTTGGTTCCTAGG AGC TCTAGGATCCAAAGG TCTACTGTATCACGG CCA00732 838589 - 839629 + | DadA family oxidoreductase CCA00733 840443 - 839619 - | hypothetical protein TERM 966 840079 - 840069 - G 71 -4 -4.8384 | CAAAGAACCCAAAAA TACT GAG AGTA AAATTACCGTGCTTA mdh 841458 - 840466 - | malate dehydrogenase TERM 967 841766 - 841751 - R 86 -6.2 -5.41787 | opp_overlap 841751 841760, overlap 841758 CAAAAAAGATAAAAA GAAACA TTTC TGTTTC TTTCAGAACAGTTAT CCA00735 841953 - 841810 - | hypothetical protein TERM 968 842094 - 842082 - R 82 -7.7 -4.62302 | opp_overlap 842082, overlap 842072 TAATATTGTTAAAAA GCCTT AAC AAGGC TTCTGCTTCAAGAAG pgi 843642 - 842059 - | glucose-6-phosphate isomerase xerD 843715 - 844611 + | site-specific tyrosine recombinase XerD CCA00738 844895 - 844608 - | hypothetical protein TERM 969 846214 - 846182 - g 70 -8.5 -3.37016 | opp_overlap 846189 846191, overlap 846189 AGAAAAAACATTTAA GAAGAAAGCGCAATC TCC GATGGCACTTTTTTC TGCTCCAACTCCTCC TERM 970 846189 - 846207 + G 75 -3 -5.31275 | opp_overlap 846182 846189, overlap 846191 ACATTTAAGAAGAAA GCGCAATC TCC GATGGCAC TTTTTTCTGCTCCAA TERM 971 846537 - 846525 - g 81 -2.7 -5.55695 | overlap 846526 GAAGAAGAGAAAAAA CTTCT AAA AGAAA ATATTCAGATGCGTA CCA00739 845259 - 846701 + | hypothetical protein CCA00740 846701 - 847219 + | type III secretion chaperone CCA00741 847244 - 848758 + | hypothetical protein TERM 972 849367 - 849357 - g 79 -6.8 -4.64076 | AAGCAAACCATAAAA GAGC ACA GCTC GAAAGATACTGGGAG CCA00742 848778 - 850262 + | hypothetical protein CCA00743 850992 - 850270 - | hypothetical protein TERM 973 850889 - 850907 + gT 82 -9 -3.90761 | opp_overlap 850887 850883 850889 850903 AAGGATAAATAGATA TATTCTCT AAT AGAGAATA TTATTCTATGCATTC TERM 974 850907 - 850889 - GT 73 -9 -3.25009 | opp_overlap 850889, overlap 850887 850883 850903 AAGGATAAATAGATA TATTCTCT AAT AGAGAATA TTATTCTATGCATTC ispH 851884 - 850955 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 975 851924 - 851957 + r 95 -14.9 -3.24747 | opp_overlap 851924, overlap 851925 CAATGCTAAAAAAAA CCTTTAGAAAAAGAT TTTT GTCTTTTTCTAAAGG TTACTAATATAACAG TERM 976 851957 - 851924 - R 100 -14.2 -5.81032 | opp_overlap 851924 851925 CAATGCTAAAAAAAA CCTTTAGAAAAAGA TTTTTG TCTTTTTCTAAAGG TTACTAATATAACAG CCA00745 853775 - 851994 - | hypothetical protein TERM 977 852316 - 852304 - G 77 -7.7 -4.20783 | opp_overlap 852296 852310 ATCGCAGGGAATAAA TCTCC GCA GGAGA AATCTTCCTGATTGA CCA00746 855152 - 853890 - | Na+/H+ antiporter, putative TERM 978 854261 - 854248 - G 74 -5.3 -4.67556 | AGAACATTGGAAAAA GTCAA AGCA TTGAC AGCAAGCAAGATACC TERM 979 854849 - 854837 - G 84 -7.7 -4.79953 | ATAAGAAGAAAGAAA GTGCT ATA AGCAC CCAAAGGAGTAAGGT TERM 980 857045 - 856998 - g 91 -6.5 -5.48825 | opp_overlap 856998 CAGGAGTGAAAAAAA CACCGCTAAGC-GATCTCAAACG CTAT CATTTG-GATGAGCTTATCGGTG TTGATCATATCTTCT CCA00747 855428 - 857128 + | sulfate transporter family protein fumC 858507 - 857125 - | fumarate hydratase CCA00749 858560 - 860392 + | ABC transporter, permease protein, putative TERM 981 861597 - 861560 - g 81 -5.7 -5.07652 | gap 1, overlap 861555 TGGGGGAAAAGAAAA GACCAAGCCACTTCTTGC TAT ACAAACAGTA-CTTGGTC TTTTTGCGACAATTG CCA00750 861051 - 861659 + | hypothetical protein TERM 982 861724 - 861738 + G 86 -7.1 -5.05079 | TACTCTTTGACGCTC CGGGA TCTGT TCCCG TTTTTGTGTCCTTGT TERM 983 861841 - 861860 + G 89 -9.4 -4.19678 | TACTTTTTGTTACCT TTGGAAGA AAAT TCTTCCAA TTTCTTGACATCTCC TERM 984 861893 - 861903 + G 72 -3.2 -5.093 | ATATGCATTTCAATT CATC GGT GGTG TTTTGTTATTTTCAG CCA00751 861672 - 862280 + | hypothetical protein TERM 985 862405 - 862389 - g 75 -5.9 -4.72127 | GAACAACAAAAACAA TATTACG CGT CGCAATA CGATATTATTTTAAA TERM 986 862695 - 862673 - g 76 -9.2 -3.62522 | opp_overlap 862673 CAATCCTTTGAAGAA CGGCGATATT ATG AATATCGACG TTTCTTGCATTGTTG TERM 987 862673 - 862695 + G 85 -9.2 -4.29073 | opp_overlap 862673 CAATCCTTTGAAGAA CGGCGATATT ATG AATATCGACG TTTCTTGCATTGTTG map 862290 - 863165 + | methionine aminopeptidase CCA00753 864399 - 863122 - | hypothetical protein TERM 988 863252 - 863272 + g 79 -11.3 -2.73994 | overlap 863240 CTCGAGGTGATTTCC TCTTGCTTT TGT AAAGCAAGA TACTCTTCACGAACT TERM 989 864079 - 864058 - G 83 -5.1 -5.29716 | CCAAGATAATAAAAA GGCTGTAGA TAGC CCTAAAGCC CACAATAATGAAGAA CCA00754 864597 - 864412 - | hypothetical protein TERM 990 864688 - 864674 - H 70 -7.2 -3.86015 | TATTTTCTTTAGAAA CTCTAA ACC TTAGAG ATCAAAACTTTTTTA CCA00755 864851 - 865354 + | hypothetical protein CCA00756 865405 - 865923 + | hypothetical protein CCA00757 865943 - 866473 + | hypothetical protein TERM 991 866562 - 866552 - f 71 -6.8 -4.25566 | opp_overlap 866552 866551 AAGAATCAGGTAAAA CCTC CAT GAGG GTTATCTTCCCAGAT TERM 992 867190 - 867205 + G 75 -5.4 -4.69962 | opp_overlap 867190, overlap 867191 TTCGGATCGATATTA TCCCTA ATGT TAGGGG TTCTTTTTTGCTATA CCA00758 866557 - 867264 + | hypothetical protein CCA00759 867491 - 867261 - | hypothetical protein CCA00760 867954 - 867481 - | cytidine/deoxycytidylate deaminase family protein rpsO 868198 - 868467 + | 30S ribosomal protein S15 TERM 993 869008 - 868990 - g 72 -8.9 -3.38812 | overlap 868988 GCTTTGTCAACAATA GTTGGGT AGTTA ACCCAAC AAAAGCCGAAATGGA TERM 994 869441 - 869455 + G 70 -8.6 -3.40403 | GCGTGCTTTGATACG CGAACA AAG TGTTCG TTCTGATGGACGGGC pnpA 868515 - 870599 + | polynucleotide phosphorylase/polyadenylase TERM 995 870665 - 870624 - T 82 -9.8 -3.53811 | gap 1, opp_overlap 870624 870635, overlap 870635 TCCATCTGTTTGAAA GATA-AAAAAAAGCCACAT GATTT ATGTGGCTTTTTTTATGTC GTTACTAAATTCAGA TERM 996 870624 - 870665 + T 86 -12.7 -2.52933 | gap 1, opp_overlap 870624 870635, overlap 870635 TCCATCTGTTTGAAA GATA-AAAAAAAGCCACATG ATT TATGTGGCTTTTTTTATGTC GTTACTAAATTCAGA TERM 997 870653 - 870635 - T 100 -8.9 -6.15717 | opp_overlap 870624 870635, overlap 870624 GAAAGATAAAAAAAA GCCACAT GATTT ATGTGGC TTTTTTTATGTCGTT TERM 998 870635 - 870653 + T 100 -9.6 -5.75478 | opp_overlap 870635 870624, overlap 870624 GAAAGATAAAAAAAA GCCACATG ATT TATGTGGC TTTTTTTATGTCGTT CCA00763 873429 - 870688 - | cell division protein FtsH, putative TERM 999 871347 - 871379 + g 100 -9.9 -5.47159 | opp_overlap 871350, overlap 871350 GCACGCAAAGACCTA CAACAGCATGTCCTG ATT CATGATATGCTGTAG TTTTTCTTTCTTCAG TERM 1000 871350 - 871376 + g 79 -10.2 -3.48897 | opp_overlap 871350, overlap 871347 CGCAAAGACCTACAA CAGCATGTCCTG ATT CATGATATGCTG TAGTTTTTCTTTCTT TERM 1001 872062 - 872089 + g 70 -2.6 -5.02476 | overlap 872082 GCCTTTAGGGATTCT TCCCCCTAAGCT CGTG AACTTTGTGGGA TTTTTTAGAAAATCT TERM 1002 873018 - 873008 - G 73 -6.8 -4.18676 | GGAGAAATCAAATAA CCTG TTT CAGG GATAGACCATCCTGA CCA00764 874556 - 873603 - | MesJ/Ycf62 family protein TERM 1003 875079 - 875065 - g 85 -8.6 -4.4448 | overlap 875074 AAACCTGTAAAGAAA TTGCCA ACA TGGCAA TGACCTCGCCAACAC TERM 1004 875138 - 875121 - g 79 -3.5 -5.37043 | ACGTTACAGAAAAAA GAAAATA ACCG CATTTTC ATCACTGTGGATCAT CCA00765 874671 - 875744 + | YjgP/YjgQ family protein TERM 1005 876340 - 876320 - g 71 -6.1 -4.22652 | opp_overlap 876314 876322 CTATACGATGGAAAA GTTGGCGTT TAC AACACCATC GCTTCCTATTGGTCT CCA00766 875748 - 876851 + | YjgP/YjgQ family protein CCA00767 878865 - 876838 - | hypothetical protein TERM 1006 876915 - 876931 + g 80 -4.5 -5.24129 | AGAAAGGTTTGAGAT TAGATAA GTT TTGTCTA TTTTTTCTCAGGCAA TERM 1007 878397 - 878382 - G 79 -3.2 -5.4492 | overlap 878384 CAGACATATAAAAAA GCTCGT AGGA ACGATC GCGTTTAACCTCTAC pheS 880210 - 879185 - | phenylalanyl-tRNA synthetase subunit alpha rplT 880588 - 880223 - | 50S ribosomal protein L20 TERM 1008 880352 - 880377 + g 70 -8.5 -3.30243 | gap 1, opp_overlap 880356, overlap 880356 TTTTAAGCCGTTAAT TAAACGG-CTAT AGG ATAGACCGTTTA TTCTAGAAGCTACGT TERM 1009 880433 - 880422 - G 70 -5.8 -4.37067 | opp_overlap 880422 880420 CAAAGACTACGAAAA TCGC CTTT GCGA TCTTTTCTATGCATA rpmI 880801 - 880607 - | 50S ribosomal protein L35 TERM 1010 880683 - 880693 + g 85 -4 -5.54894 | GATAGGTTGCGTTTT TCTT GCG AAGA TTTTTTTGATAACTT infC 881339 - 880779 - | translation initiation factor IF-3 TERM 1011 880882 - 880900 + g 82 -11.8 -3.07192 | overlap 880896 CCATTTAATTTTGGT TCGGATTC CAT GAATCCGA TGTCTTCGAGACCTT TERM 1012 881598 - 881588 - H 89 -3.2 -5.7946 | overlap 881562 CTTTTAATAAAAAAA GCTC TGT AAGC ACGTCTGGAAGTATG TERM 1013 882066 - 882076 + G 79 -6.8 -4.64657 | GGAGAAAAATGTTTT GCGT TTA ACGC TTTTTGAACATTTCC nusB 881761 - 882258 + | transcription antitermination protein NusB TERM 1014 882419 - 882395 - g 88 -11.5 -3.63895 | GCCAATTACTTTAAA GAGGTTCACTC AAC GAGTGAAGCTC AGCGGGTCATTCAAT murB 882290 - 883180 + | UDP-N-acetylenolpyruvoylglucosamine reductase CCA00774 883754 - 883158 - | hypothetical protein trmB 884543 - 883869 - | tRNA (guanine-N(7))-methyltransferase TERM 1015 884238 - 884217 - G 79 -5.2 -5.17353 | ATAGTGACGAAAAAA TGTCTGTG CTTCCC CACAAACA ATCCGCAAATTACTG TERM 1016 884686 - 884661 - R 88 -6.2 -5.76633 | overlap 884662 CTAGATATAAAAAAA TGACTTTCAG AGATTA CTGAAAGTCG TCAAAATATCTATAA TERM 1017 884685 - 884662 - R 87 -9.7 -4.04353 | overlap 884661 TAGATATAAAAAAAT GACTTTCAG AGATTA CTGAAAGTC GTCAAAATATCTATA nrdB 885761 - 884721 - | ribonucleotide-diphosphate reductase subunit beta TERM 1018 885193 - 885163 - G 71 -4.8 -4.51699 | overlap 885164 AGAATCATTACAAAA CCACTATAGAAGAA AAT CCCTTCCATAATGA TGTAGTAGCCTACTA nrdA 888919 - 885785 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1019 889193 - 889180 - H 74 -2.3 -5.40072 | opp_overlap 889183 TTCTCTGGAAAAAAA TCCGC TTCT GAGGA GCATTTTTTCCACTT TERM 1020 889731 - 889743 + G 75 -5.5 -4.72029 | ACCCTGGAGATGCGA CACGG CAT TCGTG TTTTATTGGCTTGCC CCA00778 889295 - 890101 + | glycerol-serine phosphatidyltransferase, putative TERM 1021 890857 - 890869 + G 70 -2.7 -5.1356 | overlap 890847 TTTCATTCTTCCCCA GAATT TGT GATTC TTTTTCTTCCTGGGG CCA00779 890098 - 891336 + | RmuC domain-containing protein CCA00780 894265 - 891341 - | insulinase family metalloprotease TERM 1022 891468 - 891481 + g 71 -6.7 -4.08221 | opp_overlap 891466 891468 TACTTCTCCATAACA GAGCA GATA TGCTC TTTCGTTATATTAAG TERM 1023 892285 - 892298 + g 70 -8.1 -3.63559 | TCAGTGCTTCATTAT GCTGC ATAA GCAGC TCTTTAATTCTTGCT TERM 1024 892371 - 892387 + g 86 -9.5 -4.08767 | opp_overlap 892368 TGGAATAACTTATCA GCTTTAG ATG CTAAAGC TTTTCCACGAATACC TERM 1025 892642 - 892670 + g 71 -7.4 -3.94381 | opp_overlap 892635 892645 892648 892659, overlap 892645 TAAAACAATCGTGAT GAAGAACCTCAC CACAA GAGAGGTTCTCC TTTGTAAGATTGTAT TERM 1026 892833 - 892856 + g 85 -9 -4.18494 | TTCTCTTGTACTTCT TTAAGAAGAG ACTG CTCTTCTTGA TTTTCAATAGAAATC TERM 1027 893683 - 893660 - G 71 -9.6 -2.79501 | opp_overlap 893655 893662, overlap 893662 TATACTGTCATGAGA GAGCGTAAGG ATAT CCTTAGGCTC TCCTCCTGAGTTCAC TERM 1028 893761 - 893747 - G 77 -10 -3.30635 | opp_overlap 893738 893745 TAAAGCTTCTGATAA TCGGGA TTC TCCCGA CATCATTGCGCCTTT CCA00781 894414 - 895778 + | M20/M25/M40 family peptidase TERM 1029 895784 - 895802 + T 77 -8.8 -3.54424 | opp_overlap 895784 AAAAGCATAAAAAAA GCACCCTC TTG GAGAGTGC TTTGACAAAATAAGC TERM 1030 895802 - 895784 - T 100 -11 -5.77632 | opp_overlap 895784 AAAAGCATAAAAAAA GCACCCTC TTG GAGAGTGC TTTGACAAAATAAGC TERM 1031 895836 - 895813 - T 74 -6.8 -4.37092 | opp_overlap 895813 895816 AGTGCTTTGACAAAA TAAGCTTATG AGAA CTTAAGCTTA TTCTTCTGGTTTTAA htrA 897300 - 895834 - | serine protease sucD 898511 - 897636 - | succinyl-CoA synthetase subunit alpha TERM 1032 898320 - 898301 - G 86 -7.2 -5.07486 | CAGGGGGAACAAAAA TCATTGTC GCTT GACAACGA GTAGCCTGTTTTGCT sucC 899686 - 898520 - | succinyl-CoA synthetase subunit beta TERM 1033 900523 - 900562 + G 75 -10 -3.05294 | opp_overlap 900523 900534, overlap 900533 CAAAACAATTGAAAA TCCCCACAAAATTCGTCG GTTA CGGCGAACTTATTGGGGA TCTTGAAGAATTTCA TERM 1034 900562 - 900523 - g 90 -10 -4.41817 | opp_overlap 900523 900533, overlap 900534 CAAAACAATTGAAAA TCCCCACAAAATTCGTCG GTTA CGGCGAACTTATTGGGGA TCTTGAAGAATTTCA TERM 1035 900551 - 900534 - g 70 -5.5 -4.41844 | opp_overlap 900533 900523, overlap 900523 AAAATCCCCACAAAA TTCGTCG GTTA CGGCGAA CTTATTGGGGATCTT ftsY 899757 - 900614 + | signal recognition particle-docking protein FtsY CCA00786 901342 - 900626 - | hypothetical protein CCA00787 902585 - 901398 - | aromatic amino acid transport protein glmS 904483 - 902654 - | D-fructose-6-phosphate amidotransferase TERM 1036 904024 - 904014 - G 75 -5.4 -4.83269 | overlap 904005 904002 AGACCACAGGAAAAA CTTC CCT GAAG TTGCGATAGAGTCCA glmM 905867 - 904491 - | phosphoglucosamine mutase TERM 1037 905558 - 905519 - G 83 -7.2 -4.73682 | CCTCAGAAGAGAAAA TCTTTATCCCATTATCCC AATA AGGATTATGGGATGCAGA AATCATAATTCCCGC CCA00790 906477 - 906307 - | hypothetical protein CCA00791 906507 - 907793 + | poly(A) polymerase family protein TERM 1038 908255 - 908268 + G 73 -2.4 -5.26316 | GTTTAGGTTTATTTA CCTT TTCCTC AAGG TTTTTTATCCAGTGG lpxB 907807 - 909687 + | lipid-A-disaccharide synthase CCA00793 910756 - 909998 - | hypothetical protein CCA00794 911905 - 910784 - | hypothetical protein TERM 1039 911751 - 911713 - G 71 -3.8 -4.95484 | overlap 911716 911721 GAGCACCAAATAAAA CAAGCAAAGCTATGCTAG CTG CTAGCACAGCTAGTCCTA AAATTGTGGCAACGA TERM 1040 911748 - 911716 - G 73 -5.5 -4.56436 | overlap 911713 911721 CACCAAATAAAACAA GCAAAGCTATGCTAG CTG CTAGCACAGCTAGTC CTAAAATTGTGGCAA TERM 1041 911743 - 911721 - G 100 -12.8 -4.24599 | overlap 911716 911713 AATAAAACAAGCAAA GCTATGCTAG CTG CTAGCACAGC TAGTCCTAAAATTGT TERM 1042 912044 - 912031 - R 85 -6.7 -5.35721 | overlap 912033 ATACAACAAGAAAAA GAGCT CCCT AGCTC AGATAAGAAGCCCTC CCA00795 912816 - 912085 - | hypothetical protein TERM 1043 912746 - 912704 - G 100 -16.5 -3.87201 | gap 1 CCAAAGATAATAGAA CTCAAGGCCATCGCTGTGAT ATTT ACAAC-GCGATGGCCTTGAG GTCCATGCACAGTAA CCA00796 913085 - 912990 - | hypothetical protein TERM 1044 913161 - 913134 - R 76 -6.4 -4.60678 | GAAAAAGAGAACAAA GCACCTTATGAA ACAA CTCATAAAATGC GTGGCTATTGAACTA TERM 1045 913212 - 913190 - R 88 -7 -4.8543 | opp_overlap 913208, overlap 913179 913191 913192 TAATGCTTATAAAAA GCGACCCTAT TGA ATAGGGTCAA TAAAACTGACATTAT TERM 1046 913211 - 913191 - R 85 -10.5 -3.50535 | opp_overlap 913208, overlap 913190 913192 AATGCTTATAAAAAG CGACCCTAT TGA ATAGGGTCA ATAAAACTGACATTA TERM 1047 913210 - 913192 - R 84 -11.8 -2.69598 | opp_overlap 913208, overlap 913191 913190 ATGCTTATAAAAAGC GACCCTAT TGA ATAGGGTC AATAAAACTGACATT CCA00797 914112 - 913288 - | hypothetical protein TERM 1048 913726 - 913708 - G 73 -8.8 -3.62522 | opp_overlap 913706 913708 913710 CAACTGTCCTAATAA GGAAGCGC TGC GCTCTTCC TCTTCGATTAATTGA CCA00798 914302 - 914207 - | hypothetical protein TERM 1049 914443 - 914411 - R 78 -7.1 -4.34737 | GCAGTAACTAAGAAA TTAAAGACCCCCTCA CGA TACAGGGATCTTTAA TTAAGATGTGCAATG CCA00799 917077 - 914459 - | hypothetical protein TERM 1050 916099 - 916114 + g 74 -9 -3.56325 | ATAACAATACCCCTA GCTGCA CCTT TGCAGC TTCTAGTTCTAAACA TERM 1051 917208 - 917235 + r 95 -12.9 -3.56092 | opp_overlap 917205 917203 917208 917210 GGACGCGAAATAGGA TAGGCTTCACA ACAAAA TGTGAAGCCTA TTTAGAACATAGTGA TERM 1052 917235 - 917208 - R 87 -12.9 -2.85297 | opp_overlap 917208, overlap 917205 917203 917210 GGACGCGAAATAGGA TAGGCTTCACA ACAAAA TGTGAAGCCTA TTTAGAACATAGTGA TERM 1053 917233 - 917210 - R 83 -11.1 -2.97289 | opp_overlap 917208, overlap 917208 917205 917203 ACGCGAAATAGGATA GGCTTCACA ACAAAA TGTGAAGCC TATTTAGAACATAGT CCA00800 918329 - 917262 - | hypothetical protein TERM 1054 917620 - 917646 + g 70 -5.8 -4.4017 | overlap 917618 917623 GTCAATTCATCGGCG TGTGATGTCACG TGT TGCGACATCTCA TTTTGTAAAAATTCC CCA00801 919587 - 918601 - | hypothetical protein CCA00802 919810 - 919920 + | hypothetical protein CCA00803 920130 - 921410 + | hypothetical protein TERM 1055 921878 - 921860 - g 86 -9 -4.36914 | CTTCTTCCTATAAAA TTAATCCT CTT AGGATTAA GCTGTTGCCCCTGCG TERM 1056 923617 - 923607 - g 71 -6.8 -4.02424 | ACGAACCACTACAAA CTCG TAT CGAG CAAATCGCCCAAAAC CCA00804 921608 - 924373 + | hypothetical protein TERM 1057 924409 - 924447 + F 100 -19.2 -4.1899 | opp_overlap 924416, overlap 924411 CCTATCTCCCACTGA CACTAAAGGGACATAACA CCC TGTTATGTCCCTTTAGTC TTTTACCTCAGATAA TERM 1058 924411 - 924445 + F 100 -21.8 -3.69483 | opp_overlap 924416, overlap 924409 TATCTCCCACTGACA CTAAAGGGACATAACA CCC TGTTATGTCCCTTTAG TCTTTTACCTCAGAT TERM 1059 924440 - 924416 - f 100 -15.9 -3.84825 | opp_overlap 924411 924409 CCCACTGACACTAAA GGGACATAACA CCC TGTTATGTCCC TTTAGTCTTTTACCT TERM 1060 925372 - 925360 - g 77 -7.7 -4.29302 | overlap 925362 TCCACACTAAAAGAA GATGG ATC CCATC CAGACACACATACAT CCA00805 924751 - 926055 + | hypothetical protein TERM 1061 926100 - 926076 - T 100 -8.6 -6.23545 | opp_overlap 926076 TCTAAAGAAAAAAAA GCGTCATGTG ACATG CACACAACGC CTTTTTGGTTTTCAA CCA00806 930747 - 926134 - | polymorphic outer membrane protein D family protein/autotransporter TERM 1062 928390 - 928377 - G 72 -4.5 -4.73388 | AAGCTTTAGCAAAAA TGGCA CCGC CGCCA CTATGATGTCCTGTA TERM 1063 929558 - 929575 + g 72 -8.5 -3.54919 | opp_overlap 929561, overlap 929561 GAGGTGTTTTTGCAA CAATGGA TGCC TCCATTG TTTAAGAAACTAATT plsX 931803 - 930853 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 1064 931772 - 931755 - G 75 -7.7 -4.08557 | CTTCCCAAATAACAA GAGGAGA ATGA TCCCCTC CCATCAGATCTATGC rpmF 932001 - 931819 - | 50S ribosomal protein L32 TERM 1065 931922 - 931932 + g 72 -3.2 -5.06451 | TTGTTGCAGACAGCC GCAT GAC GTGC TTTTTTCGCATGATG TERM 1066 932021 - 932048 + r 79 -5.6 -5.12474 | opp_overlap 932021 932024 932030, overlap 932008 932024 CTCACCTTTTATAAA TTATCAAAAGGG GTTT CCCTTTTGATTC TTTTTCTATCTTCTA TERM 1067 932045 - 932024 - R 84 -11.7 -3.01125 | opp_overlap 932008 932021 932024, overlap 932021 932030 ACCTTTTATAAATTA TCAAAAGGG GTTT CCCTTTTGA TTCTTTTTCTATCTT TERM 1068 932024 - 932045 + r 100 -11.7 -4.62708 | opp_overlap 932024 932021 932030, overlap 932008 932021 ACCTTTTATAAATTA TCAAAAGGG GTTT CCCTTTTGA TTCTTTTTCTATCTT CCA00809 932475 - 932014 - | hypothetical protein TERM 1069 932279 - 932258 - G 83 -9.5 -3.91882 | opp_overlap 932257, overlap 932261 TTATCACAAATACAA CAACGCAAT CCTA ATTGCGTCG ATATACTTAAAGATA TERM 1070 932276 - 932261 - G 73 -7.6 -4.06866 | opp_overlap 932257, overlap 932258 TCACAAATACAACAA CGCAAT CCTA ATTGCG TCGATATACTTAAAG TERM 1071 932500 - 932483 - H 72 -4.9 -4.77165 | gap 1, opp_overlap 932483 TTTCCCATAAGAAAA TCTCAAGC TAT GCTTG-GA TATGCTGTGCATTTT cafA 932779 - 934311 + | ribonuclease G TERM 1072 934490 - 934504 + G 79 -8.6 -4.02719 | overlap 934495 GAAGATTGTCATTGA GGATCT GAA AGATCC TTTCATCTTTCCTCC CCA00811 934320 - 935315 + | glycerol-3-phosphate acyltransferase, putative TERM 1073 935570 - 935538 - g 100 -12.9 -4.77036 | opp_overlap 935540 CTCTAGCAGTAAAAA CAGGAAATTCTTCTG ACC CTAAAGAATTTCCTG GATTAGCGCATTTAA TERM 1074 937409 - 937375 - g 72 -9.5 -2.96031 | opp_overlap 937374 937375, overlap 937374 CGCACTTCAAACAAT GGATTTTGAAGAAGT AGAAA ACTTCTCAAAAATCC TATTTGAACAGCTCC ide 935318 - 938131 + | insulinase family metalloprotease CCA00813 939491 - 938139 - | hypothetical protein TERM 1075 938215 - 938190 - G 77 -6.2 -4.61873 | TCTGAGAAACCAAAA GGTCATCAAT GATATG ATTGATGGCC CTAAGGCAAATAAGA CCA00814 939687 - 939914 + | hypothetical protein ispE 940769 - 939894 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 1076 940781 - 940814 + r 83 -11.1 -3.08298 | opp_overlap 940766 940779 940774 940769 CCATAAAACCAATTT TTTATAGGGGAGAAG TAAA CTTCTCCCCCCTAAA TGTCTAGTTTGATTC rplI 941336 - 940818 - | 50S ribosomal protein L9 rpsR 941605 - 941357 - | 30S ribosomal protein S18 rpsF 941961 - 941623 - | 30S ribosomal protein S6 pth 942591 - 942040 - | peptidyl-tRNA hydrolase CCA00820 943157 - 942600 - | 50S ribosomal protein L25/general stress protein Ctc TERM 1077 943401 - 943390 - H 70 -4.4 -4.68355 | AAAAAAAAGAAATAA CAAG AAAC CTTG GGGTGAAAGGATTCG TERM 1078 944333 - 944349 + G 82 -8 -4.54449 | AATGCACGATGCGAT CATGGC TAGAC GCCATG TTTTCTGTGGGATCT TERM 1079 944615 - 944583 - g 86 -10.7 -3.794 | opp_overlap 944583 944586, overlap 944586 CCTGAATTTATGAAA GCAGCCATTCTCCAT GCT ATGGAAAATGGCTAT GCTTTAGTCATAGTA TERM 1080 944612 - 944586 - g 100 -14.6 -2.98381 | opp_overlap 944583 944586, overlap 944583 GAATTTATGAAAGCA GCCATTCTCCAT GCT ATGGAAAATGGC TATGCTTTAGTCATA TERM 1081 944586 - 944612 + G 84 -12.4 -3.04415 | opp_overlap 944586 944583, overlap 944583 GAATTTATGAAAGCA GCCATTCTCCAT GCT ATGGAAAATGGC TATGCTTTAGTCATA glgA 943644 - 945071 + | glycogen synthase pgsA 945661 - 945053 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1082 945218 - 945202 - G 71 -9.5 -2.87463 | AATCCCCCTCAGAGA TCATTCC TAA GGAATGA GGAATCATAGCAAGT TERM 1083 946689 - 946699 + G 79 -6.8 -4.49937 | opp_overlap 946689, overlap 946684 GACTTTGTTATCAAA GCGT CTC ACGC TTTTAATATTCTTGA glyQS 945963 - 948983 + | glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits TERM 1084 949036 - 949008 - T 93 -4 -6.02345 | gap 2 TAAGCATAAAAAAAA GTGGCTCTATAGAT TCT ATCTAC-G-GCCAC TTTTCTCACTTTTGT CCA00824 949516 - 949070 - | hypothetical protein CCA00825 950143 - 949628 - | hypothetical protein CCA00826 950849 - 950340 - | hypothetical protein TERM 1085 950663 - 950676 + g 76 -6.7 -4.3739 | ATATACAACACTTCC CGCTA TCCT TAGCG TTTTCTAAAGCACTA CCA00827 951272 - 951006 - | hypothetical protein dnaG 953155 - 951380 - | DNA primase TERM 1086 951463 - 951474 + g 70 -3.6 -4.90013 | opp_overlap 951452 GAATGGAGAGTTTCT GTCC CTGG GGGC TTTTTGATTGACTTG TERM 1087 952086 - 952071 - G 90 -9 -4.92757 | opp_overlap 952071 TCACTAACAAGAAAA GTGAGG TAAT CCTCAC TTTGATCTAGTAGCT TERM 1088 952071 - 952086 + g 79 -9 -3.8647 | opp_overlap 952071 TCACTAACAAGAAAA GTGAGG TAAT CCTCAC TTTGATCTAGTAGCT TERM 1089 953518 - 953530 + G 70 -7.7 -3.66784 | opp_overlap 953518 953515 TGTAAGGAGCAAGCA GGAGA GTC TCTCC TTCTCTTCCGCATGG TERM 1090 954440 - 954425 - g 70 -3.3 -4.92756 | opp_overlap 954425 ACGATCAAAAAGAAA TCTTG CTACGT CAAGA TGCTGTGGAGTTTCT TERM 1091 955296 - 955286 - g 81 -5.4 -5.04175 | CCAATGATATAAAAA TGCA TAG TGCA CGGACACGAATGATT mutS 953458 - 955938 + | DNA mismatch repair protein TERM 1092 956465 - 956477 + G 74 -9.1 -3.54436 | opp_overlap 956465 956464 TTTATGAGATGAAAC GGTGC TTA GCACC TTGTGTGCATCTATG TERM 1093 957070 - 957040 - g 88 -11.3 -3.58802 | opp_overlap 957038 GAAACGACTACACAA TCTTCATCTCTAC CTTAT GAAGAGATGAAGA AAATTCTGAAATCTC TERM 1094 957518 - 957504 - g 86 -10 -4.10007 | overlap 957517 ACAATTTTTCCAAAA GCTTCG TGA CGAAGC GCATAGATTCGCCAT uvrC 955942 - 957759 + | excinuclease ABC subunit C CCA00831 958250 - 957768 - | hypothetical protein TERM 1095 957957 - 957970 + g 76 -3.1 -5.34555 | AGAAACTATACATCC CTGAA TTTC TTCGG TTTTTTCTGGTATAG CCA00832 958341 - 958844 + | hypothetical protein rpsN 959208 - 958903 - | 30S ribosomal protein S14 TERM 1096 959125 - 959135 + g 84 -6.8 -4.9041 | overlap 959127 GCTTTTTGCAATATT GCGA AGC TCGC TTCTTTTTTTGTAGT TERM 1097 959127 - 959138 + g 95 -4.4 -5.71983 | overlap 959125 TTTTTGCAATATTGC GAAG CTCG CTTC TTTTTTTGTAGTTCG rpmJ 959371 - 959234 - | 50S ribosomal protein L36 CCA00836 961192 - 960146 - | hypothetical protein rnpA 959785 - 960204 + | ribonuclease P CCA00837 961214 - 961378 + | hypothetical protein TERM 1098 962747 - 962763 + G 72 -4.3 -4.69048 | opp_overlap 962747 962750 AATGATTTAAACATA GCAGCAG CTC TTGCAGC TTTATTTGATTTTAT cysS 961625 - 963055 + | cysteinyl-tRNA synthetase lysS 964629 - 963052 - | lysyl-tRNA synthetase CCA00840 964605 - 964751 + | hypothetical protein CCA00841 964645 - 964794 + | hypothetical protein TERM 1099 964844 - 964806 - T 100 -11.2 -4.73864 | opp_overlap 964808 964811 964812, overlap 964801 964799 964808 964840 TTAATTAAGAGAAAA GAGAACTTCAGAGAGGAA GAT CTCCTCTCTAAAATTCTT CAAGAAGAGATTTAC TERM 1100 964842 - 964808 - T 100 -13.8 -3.97283 | opp_overlap 964808 964811 964812, overlap 964801 964799 964806 964840 AATTAAGAGAAAAGA GAACTTCAGAGAGGAA GAT CTCCTCTCTAAAATTC TTCAAGAAGAGATTT CCA00842 965368 - 964859 - | hypothetical protein TERM 1101 965281 - 965295 + g 80 -6.4 -4.72272 | TCCCGGAGTCCTTTT GATGCT GAG AGCGTC TTTTTGCTGCACAAC CCA00843 965562 - 965455 - | hypothetical protein TERM 1102 965920 - 965931 + GrH 81 -5.8 -4.87665 | opp_overlap 965920 AAACATCTTTGAATA TCCC CTGT GGGA TTTTTGTAGATGAGG CCA00844 965541 - 966263 + | hypothetical protein TERM 1103 967707 - 967722 + GTr 71 -7.6 -3.64599 | opp_overlap 967707 967706 CATCCTGTCCAAAAT GTCATG GAGC CATGAC TTTACAGTATCGTGG TERM 1104 968391 - 968380 - gTR 80 -4.4 -5.27938 | opp_overlap 968380, overlap 968390 ACCTGTAAATAAAAA GCTT CATG AAGC CTTACTATCAGCAAA CCA00846 969502 - 968408 - | 8-amino-7-oxononanoate synthase priA 966215 - 968464 + | primosome assembly protein PriA CCA00847 971172 - 969553 - | long chain fatty acid--[acyl-carrier-protein] ligase TERM 1105 970227 - 970237 + g 81 -5.4 -5.02074 | CTTTTTCAGATTTTG CTCT TAA AGAG TTTTTTAACGCGTCA TERM 1106 970504 - 970489 - G 76 -7.6 -4.27474 | opp_overlap 970489 AAACGGAGGAAGAAA CGACAT CATA ATGTCG TTTTCTGTAGGGTTG TERM 1107 970489 - 970504 + g 81 -7.6 -4.55118 | opp_overlap 970489 AAACGGAGGAAGAAA CGACAT CATA ATGTCG TTTTCTGTAGGGTTG CCA00848 971951 - 971190 - | hypothetical protein TERM 1108 972832 - 972844 + G 84 -7.7 -4.72272 | AAAAACTTGGGATCA TGCTC CCG GAGCA TTTTTAGTCGAGGAA CCA00849 972059 - 973039 + | 3'(2'),5'-biphosphate phosphatase nucleotidase TERM 1109 973018 - 973059 + T 95 -13.4 -3.49114 | gap 1, opp_overlap 973024, overlap 973007 973024 CAACGTTGTTCCTGA GGAAAACTTACTCGCTTAT TAAAT ATAAGCG-GTAAGTTTTTC TTCTACTATACTATC TERM 1110 973024 - 973053 + T 95 -8.8 -5.2291 | gap 1, opp_overlap 973024, overlap 973018 TGTTCCTGAGGAAAA CTTACTCGCTTAT TAAAT ATAAGCG-GTAAG TTTTTCTTCTACTAT TERM 1111 973053 - 973024 - T 85 -8.8 -4.25104 | gap 1, opp_overlap 973018 973024 TGTTCCTGAGGAAAA CTTACTCGCTTAT TAAAT ATAAGCG-GTAAG TTTTTCTTCTACTAT CCA00850 974085 - 973036 - | Glu/Leu/Phe/Val dehydrogenase family protein ppa 974252 - 974902 + | inorganic pyrophosphatase TERM 1112 974906 - 974933 + T 100 -11.4 -4.61566 | opp_overlap 974904 974905 974898, overlap 974908 ACAACGATATAAATG TTTAAGGAGAGG TTTC CCTCTCCTTACA TTTTATAATTTAGGA TERM 1113 974908 - 974931 + T 93 -14 -2.61007 | opp_overlap 974904 974905 974898, overlap 974906 AACGATATAAATGTT TAAGGAGAGG TTTC CCTCTCCTTA CATTTTATAATTTAG CCA00852 975392 - 974943 - | mutT/Nudix family protein fabF 976645 - 975395 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1114 975984 - 976003 + g 72 -10 -2.55999 | opp_overlap 975986, overlap 975983 975986 CTATCCCAAGGACGA GACGCTTC TTGA GGAGCGTC ATTCCTCTCCGATAA TERM 1115 976619 - 976633 + g 78 -2.8 -5.5112 | AACAACGCCCAATCC CGTG ACTACTA CACG TTTTTTATTCATAAA CCA00854 977022 - 976663 - | iojap-related protein CCA00855 977722 - 977081 - | hypothetical protein TERM 1116 977135 - 977145 + g 72 -3.2 -5.15634 | AAGTCTTCCTTTAGG TCGT ACT ACGG TTTTTTCCTCACCTA CCA00856 979383 - 977719 - | hypothetical protein TERM 1117 977996 - 977980 - G 77 -5 -5.00616 | CTGTTCTTCAAAAAA CGCTGC TATAT GCTGCG AGGTTAGATTTAATC TERM 1118 978845 - 978870 + g 79 -6.9 -4.59109 | overlap 978846 CAGACTAAAGAAGCG TGCAAGTCTTT ATAG AAAGTCTTGCG TTTTTCCAAGGTCTG CCA00857 979473 - 980534 + | hypothetical protein miaA 981553 - 980525 - | tRNA delta(2)-isopentenylpyrophosphate transferase CCA00859 981897 - 981565 - | anti-anti-sigma factor CCA00860 981973 - 982761 + | hypothetical protein cutA 982758 - 983090 + | periplasmic divalent cation tolerance protein TERM 1119 983586 - 983567 - g 70 -9.4 -2.67747 | overlap 983566 983570 TGTTCAGAGGATAAG GAAGATTC AGAA GAATCTTC AGCACATCACCAATG CCA00862 983198 - 983626 + | KH domain-containing protein TERM 1120 983671 - 983699 + T 80 -10.4 -3.06737 | opp_overlap 983671 983679, overlap 983663 TAGAGTTTGGCAATA GCTAAAAACCCC TTTGC GGAGTTTTTAGC TCTTCGCGGTTAATA TERM 1121 983699 - 983671 - T 87 -12.6 -3.02829 | opp_overlap 983671 983663, overlap 983679 TAGAGTTTGGCAATA GCTAAAAACCCC TTTGC GGAGTTTTTAGC TCTTCGCGGTTAATA murC/ddlA 986130 - 983695 - | UDP-N-acetylmuramate--alanine ligase/D-alanine--D-alanine ligase TERM 1122 984456 - 984469 + g 70 -8.1 -3.75657 | opp_overlap 984452 984455 984456 AAAAGAGCAACGAAG GCCCT CCAT AGGGC TTATTAGCTATTTCC murG 987214 - 986138 - | N-acetylglucosaminyl transferase ftsW 988277 - 987123 - | cell division protein FtsW TERM 1123 987297 - 987283 - GR 72 -3.5 -5.08824 | CCCTGACTGAAAAAA GGAAG ATTCA CTCCC TTACTCGGCAACAAG CCA00866 989024 - 988296 - | LysM domain-containing protein murD 990280 - 989021 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 1124 989937 - 989927 - G 75 -5.4 -4.76041 | opp_overlap 989927 TAGATGGACTAAAAA CAAC ACT GTTG TTGTTTTCCCTGCCG mraY 991330 - 990284 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 1125 991079 - 991063 - G 90 -12.3 -3.59583 | ATAACCACGTTGAAA GCTTCCC TAA GGGAAGC CAAAGGAAAACAGTC murF 992694 - 991348 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 1126 992321 - 992334 + g 71 -3.9 -4.99312 | opp_overlap 992316 992321, overlap 992316 ACTGAGGAAAGAAAA GTATT TGCA AATAC TTTTGTTGTTGTCTT TERM 1127 992334 - 992321 - G 71 -3.9 -4.9448 | opp_overlap 992321 992316, overlap 992316 ACTGAGGAAAGAAAA GTATT TGCA AATAC TTTTGTTGTTGTCTT CCA00870 993075 - 994595 + | 60 kDa chaperonin, putative TERM 1128 994968 - 994917 - f 74 -3.2 -5.38047 | gap 1, opp_overlap 994924, overlap 994919 994920 TATTGATAGAAAAAA CAGGGAT-GTCTTTTTTTATTAGCT TAT AGCTTTTAAAAATAGACTATCCTTA GGGAAACAGACTATG CCA00871 994981 - 995862 + | hypothetical protein TERM 1129 995929 - 995890 - T 86 -8.1 -4.69622 | gap 1, opp_overlap 995889 995890, overlap 995892 AGACAAGGGCAAAAA TG-GAAGAAATTGTGTAG GGAAA CTACACACCTTCTTCGCA AATTTTTTCTGCAAT TERM 1130 995926 - 995892 - T 81 -10.9 -2.6369 | opp_overlap 995890 995889, overlap 995890 ACAAGGGCAAAAATG GAAGAAATTGTGTAG GGAAA CTACACACCTTCTTC GCAAATTTTTTCTGC CCA00872 996133 - 995912 - | hypothetical protein efp-1 996764 - 996192 - | elongation factor P TERM 1131 996513 - 996527 + g 70 -8.6 -3.2794 | TGTCTCATCATCCAT GAAGGT AGC ACCTTC TTGATCTGAATAAAG CCA00874 996964 - 997839 + | AMP nucleosidase tkt 999830 - 997833 - | transketolase TERM 1132 997904 - 997882 - G 77 -9.8 -3.48807 | overlap 997875 GCAGTAAATCCACAA GCTTCCGCTA CAT CAGCGGGAGC TCCCGAATAGCCAAA TERM 1133 998075 - 998061 - G 77 -8.6 -3.90744 | TTGTTGTTCAAATAA TTCCCA ACA TGGGAA GGAAATGACTCGAAC TERM 1134 1001963 - 1001953 - gH 76 -6.8 -4.46581 | overlap 1001957 GAAAATCCGAGAAAA CCAC CGT GTGG AAACTCGTGAGGCTA TERM 1135 1002335 - 1002321 - gH 72 -4.3 -4.81843 | AACAAGCAAAACAAA TCTCT GAATT AGAGA ATAAGCTGATTCATT alaS 1000094 - 1002721 + | alanyl-tRNA synthetase TERM 1136 1002801 - 1002813 + GF 77 -6.3 -4.56597 | overlap 1002794 TGGAGCTCGCGGATT CTTAG CCG CTAAG TTTTTCCGCGAGAGG TERM 1137 1003966 - 1003948 - gf 76 -4.6 -5.00895 | opp_overlap 1003959 TTGAGGAGACAAAAA CAGAGAAA TTA TTTTTCTG TAACTACCGAAGAAG mfd 1002691 - 1005948 + | transcription-repair coupling factor hemE 1005958 - 1006959 + | uroporphyrinogen decarboxylase hemN 1006932 - 1008308 + | coproporphyrinogen III oxidase TERM 1138 1008903 - 1008889 - g 100 -4.3 -6.09888 | opp_overlap 1008889 TTCGAAGAAAAAAAA TAAGG GAGCT CCTTA TCTTGCCTCGCTACG CCA00880 1008305 - 1009573 + | protoporphyrinogen oxidase CCA00881 1012045 - 1009544 - | hypothetical protein TERM 1139 1009681 - 1009691 + g 76 -3.2 -5.34655 | TATGATCGAGAAGAT GCTG AGC TAGC TTTTCTTTTTCATTC TERM 1140 1010656 - 1010646 - G 79 -5.4 -4.9934 | opp_overlap 1010646 ATAACATGAGAAAAA GATC CAT GATC TTTCTTTACAAACAA TERM 1141 1010646 - 1010656 + g 70 -5.4 -4.41348 | opp_overlap 1010646 ATAACATGAGAAAAA GATC CAT GATC TTTCTTTACAAACAA TERM 1142 1011017 - 1011000 - G 73 -2.1 -5.18357 | gap 1 CAACCTAGGAAAAAA CTATATTC TGG GAA-ATAG GGATGTTCTGAAACA TERM 1143 1012028 - 1012015 - G 73 -6.7 -4.30559 | AATAAAATTGGAAAA CGCAT TTAC ATGCG TATCGACATACTTTC TERM 1144 1012105 - 1012092 - H 93 -3.1 -6.02345 | GAATGATAAAAAAAA TCGAA ACAA CTCGA AAAAAACAAACTCTA hctA 1012462 - 1012839 + | histone H1-like protein HC1 TERM 1145 1012862 - 1012892 + F 76 -2.7 -5.40625 | gap 1, overlap 1012863 CTTATTTCGGGTTTC AGAGGGTAA-TTAT ATTT ATAACTTGCCCTCA TTTTTTCTCTCCTCT CCA00883 1013066 - 1014271 + | RNA methyltransferase yajC 1014342 - 1014695 + | preprotein translocase subunit YajC nqrF 1014815 - 1016110 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 1146 1016262 - 1016274 + F 81 -7.7 -4.38322 | AGGTTCTATTTCACT CCCTT AAC AAGGG TTCTTTTCTCCTTCC TERM 1147 1016306 - 1016320 + F 75 -8.6 -3.48617 | overlap 1016298 1016304 CACAGTACTGGTTCA CTAGTC GTT GACTAG TATTTAGACTTTTTT TERM 1148 1016978 - 1017005 + F 71 -8.5 -3.08464 | CCTGTCGGCAAACTT GTGGGCACTAT CAATTC ATAGTCCCCAC TTCCATGAGTGATAG TERM 1149 1018128 - 1018115 - f 72 -8.1 -3.39936 | opp_overlap 1018115 ACTGAAACCGTATAA GGAGG CTCT CCTCC TGTAATTTCAAAAGC TERM 1150 1019109 - 1019129 + F 76 -6.8 -4.63542 | opp_overlap 1019109 GGGGATCTTGATTAA CTGTGACG GTTAG CGTCCCAG TTTTTGAACGTTGTC TERM 1151 1019652 - 1019625 - f 76 -6.3 -4.46233 | opp_overlap 1019625 1019651, overlap 1019614 CCAATCCTAAAGAAA GGAGCGGAA ACGGTGTAAA TTCCGCCCC TGTTGTAATCACAAA TERM 1152 1019715 - 1019700 - f 82 -7.6 -4.56597 | overlap 1019709 CCGTTCTTCCAAAAA GGGAAA CATT TTTCCC AAAATACTGCTCATA TERM 1153 1019759 - 1019736 - f 82 -5.3 -5.24531 | overlap 1019737 ACTGCTCATAAAAAA TCTTTCCTC CTAAGC GAGGAAGGA AAGGCAACCAACAAT TERM 1154 1019762 - 1019737 - f 70 -7 -3.73995 | gap 1, overlap 1019736 CTGCTCATAAAAAAT CTTTCC-TCCT AAGCG AGGAAGGAAAG GCAACCAACAATGTA TERM 1155 1020537 - 1020518 - f 100 -9.4 -5.76949 | opp_overlap 1020518 TACGGGCAAAAAAAA GGAGAATA TTTC TATTCTCC TTATAAAAAACTCAG TERM 1156 1020518 - 1020537 + F 77 -9.4 -3.29511 | opp_overlap 1020518 TACGGGCAAAAAAAA GGAGAATA TTTC TATTCTCC TTATAAAAAACTCAG TERM 1157 1020656 - 1020671 + F 70 -4.6 -4.78149 | TCTGAGTTCGGAATG GGGTCA GGTG TGTCCC TTTTTCCATTATCAC TERM 1158 1023218 - 1023230 + F 78 -7.7 -4.2354 | AGGTTCTATTTCACT CCCTT AAC AAGGG TTCTTTTCACCTTTC TERM 1159 1023460 - 1023476 + F 76 -7.9 -3.97088 | opp_overlap 1023459 1023458 ATCGACCCTACAACC CCACACC AAA GGCGTGG TTTGGTCTTCTCCCC TERM 1160 1023993 - 1024012 + F 72 -9.2 -2.65808 | opp_overlap 1023981, overlap 1023990 1024005 AAAGGAGGTGATCCA GCCCCACC TTCC GGTAGGGC TACCTTGTTACGACT TERM 1161 1024892 - 1024912 + F 71 -7.5 -3.64371 | overlap 1024893 TAGTATTAGATGCTG GCTTGGGGT TGA GCCCCAAGA TTTAACATCTAACTT TERM 1162 1024893 - 1024911 + F 81 -11 -2.7814 | overlap 1024892 AGTATTAGATGCTGG CTTGGGGT TGA GCCCCAAG ATTTAACATCTAACT TERM 1163 1025564 - 1025548 - f 81 -9.5 -3.85552 | AAATTTAAAAATTAA CGGATTT TAA AAATCCG AACAAGCATTCTTTA TERM 1164 1026124 - 1026143 + F 81 -10.8 -2.76696 | opp_overlap 1026119, overlap 1026123 ATGAAAAATTTCAAT CTGTCGTA TGCA TACGACAG CTTCTTGCAGGAAAA CCA00887 1026516 - 1028933 + | cell division protein FtsK, putative CCA00888 1028938 - 1029726 + | metal dependent hydrolase, putative CCA00889 1029723 - 1030385 + | SET domain-containing protein CCA00890 1030842 - 1030390 - | hypothetical protein CCA00891 1032229 - 1030856 - | sodium/alanine symporter family protein TERM 1165 1032112 - 1032096 - G 84 -8.1 -4.66537 | opp_overlap 1032096 TTTTTTAACATAAAA TTAAAGC CTA GCTTTAA TCCTGTAAATTGCAG CCA00892 1032986 - 1032342 - | hypothetical protein TERM 1166 1032602 - 1032590 - G 71 -6.3 -4.18762 | AATCTTCAGCTAAAA GCTTT AAT AAAGC TAAAGGGTGAAGTTC TERM 1167 1032699 - 1032722 + g 75 -10.4 -3.24425 | opp_overlap 1032691 1032701, overlap 1032690 AGAAGCAGCGTCAAC GACGAAAGAG ATGT CTCTTTTGTC TTGATCCGTTATCTG CCA00893 1033243 - 1034610 + | hypothetical protein TERM 1168 1034593 - 1034625 + T 93 -14.4 -3.10589 | gap 1, opp_overlap 1034586, overlap 1034586 CACTTAAACGGTTCT GT-TAGCGTTGCACT TTAA AGTGCAACGCTACAC TATTACAGCTTTTTG ribH 1035092 - 1034628 - | riboflavin synthase subunit beta TERM 1169 1034870 - 1034897 + g 73 -5.6 -4.53602 | opp_overlap 1034859 1034872 1034877, overlap 1034872 CACACGCTACTATAG CATCATACTTCA CACC TGAAGTAAGAAG TTTCTTTAATGTGCA ribA/B 1036364 - 1035105 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein TERM 1170 1035972 - 1035958 - G 73 -5.7 -4.50159 | GCCAAGGGAAAGAAA TGTCC CGGAC GGACA AAATCTTCGGGACGG TERM 1171 1036347 - 1036332 - G 71 -7.6 -3.80133 | overlap 1036330 TATTGGGACAAAACA TGATGC AGAT GCATCA CCTTCGGATTTCATC ribD 1037556 - 1036450 - | riboflavin biosynthesis protein RibD TERM 1172 1036819 - 1036838 + g 82 -8 -4.65895 | opp_overlap 1036819 GGTCACATAGAGAGA TTTTCCAT GACT ATGGAAAA TTTTTGCCTGAGGGC TERM 1173 1036919 - 1036939 + g 76 -9 -3.7511 | AGTTCTCCGGAAGGT TCCCTTGC CGTTA GCAGGGGA TTATCTTGTAAAACA TERM 1174 1037205 - 1037189 - G 77 -10.9 -2.82453 | opp_overlap 1037201, overlap 1037186 1037184 1037201 AAAACACGAATACCA GCCTCTT TTA AAGAGGC TACCCCTTTACCAGC TERM 1175 1037299 - 1037321 + g 76 -10.6 -2.6186 | overlap 1037298 ATTGACGCAGGGAGG CGTATTGCCA TAA TGGCAACACG GTTCTAAGGTTACAT TERM 1176 1037974 - 1037992 + G 74 -3.8 -5.14626 | opp_overlap 1037974 TCAGGTAATTAAAAG TGTAGGTG CTT TACCAACA TTTTCTTTTACTCCT serS 1037600 - 1038880 + | seryl-tRNA synthetase CCA00898 1038945 - 1039688 + | hypothetical protein cadA 1039704 - 1041677 + | cadmium-translocating P-type ATPase rodA 1042819 - 1041680 - | cell shape-determining protein MrdB TERM 1177 1041851 - 1041832 - G 80 -10.8 -3.28487 | opp_overlap 1041831 1041827, overlap 1041830 TGATATTAATTAACA CGTGCATA GAGA TATGCACG GTGATTCCTGCAGCT TERM 1178 1042110 - 1042132 + g 72 -8.4 -3.54739 | overlap 1042106 1042104 1042112 GCTCGCTGATGGTGA TTCGAAGGGC TTA GCCTTTCGTA TTGGTATTCTTTTAT TERM 1179 1042112 - 1042130 + g 80 -11 -3.32468 | overlap 1042110 1042106 1042104 TCGCTGATGGTGATT CGAAGGGC TTA GCCTTTCG TATTGGTATTCTTTT CCA00901 1042855 - 1043445 + | biotin--protein ligase CCA00902 1043937 - 1043401 - | hypothetical protein TERM 1180 1043456 - 1043443 - G 76 -6.7 -4.33854 | ATCAAGAAAACGAAA TAGCC TAGA GGCTA TCCATAATGACGGAC TERM 1181 1043799 - 1043781 - G 86 -8.9 -4.42513 | opp_overlap 1043781 AACGAGAAAGAGAAA GCAAAGC TTGAC GCTTTGC TATTGCATGGGAAAG TERM 1182 1045272 - 1045252 - gH 74 -6.1 -4.48221 | opp_overlap 1045267, overlap 1045233 1045254 GACGAAGTTATAAAA TCTCGCCTC CTG GAGGAGAAA GTCTCTATGATACGG gpmA 1044828 - 1045511 + | phosphoglyceromutase CCA00905 1045466 - 1046623 + | nifS protein, putative TERM 1183 1047017 - 1047029 + G 70 -7.7 -3.76373 | TACCCTTATACCACT GCATC ATC GATGC TTTAGATATTGCCGC CCA00906 1046620 - 1047441 + | nifU protein, putative TERM 1184 1047593 - 1047568 - g 70 -2.5 -5.055 | opp_overlap 1047574 CCAATTCCTAAAAAA GAAAGTTGCTT CATT AGGCATCTCTC CTTTAGGCCTTTTAG TERM 1185 1047627 - 1047638 + G 73 -5.8 -4.56597 | overlap 1047624 TTTCTGCAGCTTTAG GGAG TGCC CTCC TTTTTGGGAAAAACA TERM 1186 1048008 - 1047985 - g 86 -11.8 -3.33162 | opp_overlap 1047982 1048006 TACCTTATCGGATAA CCTAGGGAAT ACGT ATTCCCCAGG AGAGTTCTCAAACTC TERM 1187 1048008 - 1048025 + G 72 -8.5 -3.53276 | overlap 1047982 1048006 ATACGTATTCCCCAG GAGAGTT CTCA AACTCTC TATTATTATCTGCAT TERM 1188 1048076 - 1048047 - g 72 -8.7 -3.60296 | opp_overlap 1048041 TATCTGCATGTGAAA GTTACTTAGGAAA AATT TTCCCTAAGGAAC ACTTCGCTCTTACCT TERM 1189 1048343 - 1048359 + G 74 -5.1 -4.66833 | opp_overlap 1048335, overlap 1048335 GGAATTATTGCCTTG GCAAGCT TTT ACCTTGC TTTTTACGCTTACGA TERM 1190 1048475 - 1048448 - g 77 -4.9 -4.96762 | gap 1, opp_overlap 1048448 1048456 GAGATACTACAAAAA GAATCTCCC-GA AAAAA TCAGGGTGATTC TCTCGTATTTGGATC CCA00907 1047545 - 1048558 + | type III secretion system protein CCA00908 1048582 - 1049133 + | hypothetical protein CCA00909 1049130 - 1050434 + | type III secretion system ATPase TERM 1191 1050652 - 1050636 - g 70 -5.9 -4.36914 | opp_overlap 1050636 TTTGCTTTTAGAAAA CTTGCAA ACA TTACAAG TATCTATTTATAAAC CCA00910 1050427 - 1050786 + | hypothetical protein TERM 1192 1051199 - 1051223 + G 71 -9.4 -2.87344 | opp_overlap 1051222 ATCAAAAAAAAGCCT CTTTTTCAGC TTGTT GCTGAAAAGG TCTGTGCAGCAAGTA TERM 1193 1051462 - 1051448 - g 73 -10 -2.8585 | opp_overlap 1051447 1051448, overlap 1051447 GGACCTAATGGAAAT GGTTGC TTA GCAACC CTTCTATATACCTCA TERM 1194 1051448 - 1051462 + G 73 -10 -2.75993 | opp_overlap 1051448 1051447, overlap 1051447 GGACCTAATGGAAAT GGTTGC TTA GCAACC CTTCTATATACCTCA TERM 1195 1051871 - 1051911 + G 82 -10.7 -3.46858 | opp_overlap 1051882, overlap 1051876 1051882 TTAGGGCTCTATTCC TCAGAGAAAAATTCTTGGA AAT TCGAAGAATTTATCTTTGA TCTATTTTGCTATAG TERM 1196 1051876 - 1051906 + G 71 -7 -4.00589 | opp_overlap 1051882, overlap 1051871 1051882 GCTCTATTCCTCAGA GAAAAATTCTTGGA AAT TCGAAGAATTTATC TTTGATCTATTTTGC TERM 1197 1051900 - 1051882 - g 74 -4.6 -4.96848 | opp_overlap 1051876 1051871 1051882 TTCCTCAGAGAAAAA TTCTTGGA AAT TCGAAGAA TTTATCTTTGATCTA TERM 1198 1052085 - 1052057 - g 71 -7.5 -3.88583 | overlap 1052046 CAAATTTTCCATAAA GTGACTGGAAAAA AAC TTTCTCCAAACAC AACATTTGAATTAGA CCA00911 1050806 - 1052188 + | UTP--glucose-1-phosphate uridylyltransferase family protein TERM 1199 1052908 - 1052920 + G 73 -7.7 -3.87641 | CTCAACGGTTTGGCA GGTCT TGG AGACC TTTGTACCACGTGTT gpsA 1052185 - 1053189 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 1200 1053208 - 1053193 - f 89 -9 -4.62302 | opp_overlap 1053193 GAATATCTTTAAAAA GGTGGA TATT TCCACC TTTCTCATCTCCTTA TERM 1201 1053193 - 1053208 + F 82 -9 -4.04149 | opp_overlap 1053193 GAATATCTTTAAAAA GGTGGA TATT TCCACC TTTCTCATCTCCTTA CCA00913 1053322 - 1054356 + | major outer membrane protein, putative CCA00914 1055519 - 1054353 - | hypothetical protein TERM 1202 1054831 - 1054843 + g 81 -5.5 -5.07941 | opp_overlap 1054826, overlap 1054826 TTTAACAAAAGCTGA GCGTT TTC AGCGC TTTTTATATCATTTT CCA00915 1057771 - 1055528 - | hypothetical protein TERM 1203 1057837 - 1057824 - R 91 -2.5 -6.09196 | overlap 1057797 TTTAAAATAAAAAAA TATTT CAAA AAATA AAAAATAATTAACTT pckA 1059696 - 1057894 - | phosphoenolpyruvate carboxykinase mreB 1060793 - 1059693 - | cell shape-determining protein MreB helZ 1064298 - 1060798 - | SNF2 family helicase TERM 1204 1062499 - 1062526 + g 73 -5.6 -4.63542 | opp_overlap 1062524 AGTTTTTACATTACG GCCTTTCTTAGG CAAC TCTAGGAAACGC TTTTTAGCACTTATA TERM 1205 1065116 - 1065130 + G 73 -8.6 -3.72396 | opp_overlap 1065116, overlap 1065100 CGTCCTTCTCAAGAA GGAGAT TTC ATCTCC TTATCTCTTCATGTT TERM 1206 1065130 - 1065116 - g 72 -8.6 -3.61398 | opp_overlap 1065100 1065116 CGTCCTTCTCAAGAA GGAGAT TTC ATCTCC TTATCTCTTCATGTT TERM 1207 1065175 - 1065157 - g 71 -3.8 -4.86731 | TGTTTCCAAACAAAA TGAAGAAG GAA CTCCTACA GCAATCTTTGAAAAT TERM 1208 1065520 - 1065549 + G 72 -8.7 -3.58343 | opp_overlap 1065533 1065547, overlap 1065521 AAACATTGTCGATTT TGATCTTCCAACA TCTA TGTTAGAAGATCG TTTAGCCATGCTAAC TERM 1209 1065521 - 1065548 + G 73 -10 -2.74792 | opp_overlap 1065533 1065547, overlap 1065520 AACATTGTCGATTTT GATCTTCCAACA TCTA TGTTAGAAGATC GTTTAGCCATGCTAA TERM 1210 1065722 - 1065697 - g 70 -7.7 -3.72695 | opp_overlap 1065700, overlap 1065700 ATTTTTCTTAGCAAA CAAGATTTTCA CAGA TGAAAAGCTTG TGATCAGCCGTGAAG tig 1064594 - 1065919 + | trigger factor clpP 1066098 - 1066709 + | ATP-dependent Clp protease proteolytic subunit TERM 1211 1066959 - 1066944 - g 75 -2.6 -5.28755 | AAAGAGATCAAAAAA CATATC GATA AATATG TTGTAGGCCAGGAAA clpX 1066719 - 1067984 + | ATP-dependent protease ATP-binding subunit CCA00922 1068014 - 1069246 + | poly(A) polymerase family protein TERM 1212 1070479 - 1070469 - g 70 -5.4 -4.43844 | opp_overlap 1070469 TCAGCAGCGACAAAA CGTA ATC TACG TCATATCTTTTCATC engA 1069368 - 1070792 + | GTP-binding protein EngA TERM 1213 1070835 - 1070811 - f 86 -6 -5.42198 | overlap 1070813 GTTTAAAAAATAAAA TATTATTATT ACAAA AATAATAATA ACAAATTAATTATTT CCA00924 1070867 - 1071397 + | hypothetical protein TERM 1214 1071441 - 1071422 - T 75 -7.1 -4.24002 | TTGGAAAGGGGAAAA GGCTGGA AGCTAG CCCAGCC CTAAAAGCTCTTTCT secA 1074368 - 1071456 - | preprotein translocase subunit SecA TERM 1215 1072154 - 1072169 + g 71 -6.2 -4.16279 | TATTCATAACATCGT CATACT CTAG AGTATG TTTTCGAATCGTGTA TERM 1216 1074477 - 1074464 - R 80 -6.7 -4.67982 | opp_overlap 1074464 1074463 TTCCAGTGAATAAAA GGAAC AAAA GTTCC CTTGCTTGTATTCTT CCA00926 1075881 - 1074556 - | hypothetical protein TERM 1217 1075593 - 1075579 - G 76 -4.3 -5.08088 | opp_overlap 1075579 AATCTCTAATAAAAA TTGAG GGCCT CTCAA ATTTAACTTTTGAGC psd 1076846 - 1075947 - | phosphatidylserine decarboxylase trmE 1077003 - 1078334 + | tRNA modification GTPase TrmE nth 1078324 - 1078968 + | endonuclease III TERM 1218 1079341 - 1079366 + G 90 -3.3 -5.92337 | GGTTTGTTTAGTATG CTATTGTATTC GGGA GACTACAAAAG TTTTTTTTCCTCTAT brnQ 1079131 - 1080360 + | branched-chain amino acid transport system carrier protein BrnQ TERM 1219 1080609 - 1080627 + G 93 -7.4 -5.38047 | CTGATGGGGATTGTT GCGTTCAT TTA ATGACCGC TTTTTTCTCTGCCTA TERM 1220 1081961 - 1081973 + G 77 -6.2 -4.61873 | GAAGAAGAAAATTGC CGCC TATTT GGCG TTTTCCTTTATCGGG TERM 1221 1082279 - 1082266 - g 74 -3.9 -5.02074 | opp_overlap 1082266 GCAGGCGTTAAAAAA CAAAA AGGC TTTTG TTTTCACTAAGGCGG TERM 1222 1082396 - 1082376 - g 73 -8.3 -3.64716 | opp_overlap 1082375, overlap 1082374 TCATCCCTGAAAATA CTGTAATCG CAA CGGTTACAG ATATCTTCAAATTAG CCA00931 1080395 - 1084012 + | Snf2/Rad54 family helicase CCA00932 1084502 - 1084035 - | hypothetical protein TERM 1223 1084228 - 1084244 + g 73 -9.5 -3.09681 | overlap 1084231 TGCTGTAACCAGTTC CAATCTG CTT CAGATTG TTCCGTAGGCTTTTG TERM 1224 1085042 - 1085029 - g 83 -3.1 -5.63517 | GGTCCAAAGAAAAAA CACTG TCAT CAATG GCATACGTCAGGGAT CCA00933 1084766 - 1086154 + | dihydrolipoamide dehydrogenase TERM 1225 1086472 - 1086458 - g 74 -4.2 -5.11937 | AAGAACCTCAAAAAA TTGCAG AAT CAGCAA AAATTCTTCAGCTTA TERM 1226 1086862 - 1086850 - g 71 -6.3 -4.287 | AAACAAACGCTAAAA GATCT TGC AGATC ACGGAGTGAAAATCG lipA 1086151 - 1087089 + | lipoyl synthase TERM 1227 1087095 - 1087079 - f 80 -6.6 -4.7497 | opp_overlap 1087079 1087074 CTGATGTAGCAAAAA TGCAGA ATTAG TCTGCA TTTGCTTTGTTTACA TERM 1228 1087079 - 1087095 + F 71 -6.6 -4.27211 | opp_overlap 1087079, overlap 1087074 CTGATGTAGCAAAAA TGCAGA ATTAG TCTGCA TTTGCTTTGTTTACA sctJ 1087271 - 1088263 + | type III secretion protein SctJ CCA00936 1088263 - 1089096 + | hypothetical protein sctL 1089263 - 1089952 + | type III secretion system protein sctR 1089967 - 1090878 + | type III secretion system protein sctS 1090888 - 1091172 + | type III secretion inner membrane protein SctS TERM 1229 1091889 - 1091905 + G 75 -8 -4.13654 | opp_overlap 1091876, overlap 1091876 1091903 1091904 GATGGCACCACAGGT GCAGGT TATCT ACCTGC TTTCTGCTTTGAAAG sctT 1091179 - 1092048 + | type III secretion inner membrane protein SctT TERM 1230 1092122 - 1092104 - T 100 -11.8 -4.22346 | opp_overlap 1092094 1092104, overlap 1092094 1092093 GAAATGCAGCGAAAA GCTGCTTA AAT TAAGCAGC TTCTTTCGCTAACGT TERM 1231 1092104 - 1092122 + T 95 -11.8 -3.96483 | opp_overlap 1092094 1092104 1092093, overlap 1092094 GAAATGCAGCGAAAA GCTGCTTA AAT TAAGCAGC TTCTTTCGCTAACGT CCA00941 1092597 - 1092148 - | hypothetical protein TERM 1232 1092556 - 1092571 + g 74 -4 -5.16132 | AAACTGAGAGGACGA CTCTTT TGAA GAAGAG TTTTCTTTTGGTGTC TERM 1233 1092652 - 1092635 - R 79 -5.7 -5.08824 | opp_overlap 1092624 TTTTTATTTAAAAAA TACTTAT ATAC ATAAGTA TCAAAAAAATTATTT TERM 1234 1092675 - 1092662 - R 76 -2.5 -5.58074 | overlap 1092666 TAAGTATCAAAAAAA TTATT TTAA AATAA ATAAGAAATTTTTAA CCA00942 1093695 - 1092691 - | hypothetical protein TERM 1235 1092752 - 1092719 - G 77 -8.3 -3.9461 | gap 1, overlap 1092724 1092732 CTCTTTGAAGAACAA CGACATCGAGAAACAG CTC CTGTTTCTGGAT-CCG TGAGATAAATGTAGT TERM 1236 1092748 - 1092724 - G 75 -10.1 -3.0663 | overlap 1092719 1092732 TGAAGAACAACGACA TCGAGAAACAG CTC CTGTTTCTGGA TCCGTGAGATAAATG TERM 1237 1093400 - 1093434 + g 75 -2.9 -5.1861 | gap 1 GAGTTATTTGGTGGT CGTGAAAACGGCACTT TTAA AAG-GCGGTATTTACG TTTTTTCCTAGTCGC CCA00943 1094240 - 1093698 - | hypothetical protein CCA00944 1094662 - 1094225 - | hypothetical protein TERM 1238 1094370 - 1094383 + g 73 -6.7 -4.20084 | opp_overlap 1094370, overlap 1094332 ACAGAATATACATAA GGGAT ACGT ATCCC TTTTCCCTGACTCGT CCA00945 1095048 - 1094671 - | hypothetical protein TERM 1239 1094842 - 1094854 + g 70 -7.7 -3.76492 | overlap 1094841 TTTCTGATCTACGAT CTCTC TTA GAGAG TTTCCTCCAGTTGCG gspF 1096243 - 1095068 - | general secretion pathway protein F TERM 1240 1095287 - 1095301 + g 76 -7 -4.40037 | GCCTAAGGCTAATTT CGGCAC CCA GGGCCG TTTTGCTAATTCTTT gspE 1097751 - 1096258 - | general secretion pathway protein E TERM 1241 1096559 - 1096592 + g 84 -6.8 -4.88736 | gap 1 GCCCGTTCTTGGACA TCTGCTGCGCATTGC TGCTT GCAATGAG-GGCAGA TTTTTCTCACTAATC TERM 1242 1097459 - 1097472 + g 75 -8.1 -4.04927 | TCCTCTTCATTTATT GGCGA GGTA TCGCC TTCTTTCATGCTTAA gspD 1100002 - 1097741 - | general secretion pathway protein D TERM 1243 1099678 - 1099700 + g 78 -10.7 -3.06762 | overlap 1099681 TATCTCCCCTTTCGC GAATCTCTG CTGAC CAGAGATTC TCTATATGCTTAATT TERM 1244 1099956 - 1099934 - G 70 -8.4 -3.30439 | overlap 1099929 AATAGTCAAAGCTAA GCTTGGCACG CAA CACGCCAAAC CTGACAATCCGAAAA CCA00949 1101316 - 1100003 - | hypothetical protein TERM 1245 1101054 - 1101041 - G 87 -3.1 -5.82388 | AAACTCTAAAAAAAA CTTGC CTCC ACAAG CGTCAGGACGCTTAT TERM 1246 1101352 - 1101340 - R 75 -4.9 -4.91473 | TAAGCTAAAAATAAA GTTAT AAG ATAAC CGATTACAGAAAAAA CCA00950 1102507 - 1101437 - | proline dipeptidase TERM 1247 1101980 - 1101968 - G 74 -6.3 -4.40804 | CACGATCGGAGAAAA TGAAG GCC CTTCA GCACCAGCTTTAGCC mutL 1104253 - 1102511 - | DNA mismatch repair protein TERM 1248 1103433 - 1103445 + g 100 -6.3 -5.90981 | opp_overlap 1103433 GGCAAAAGCATGGAA TAAGC CTC GCTTA TTTTTTTTGATATAA TERM 1249 1103906 - 1103875 - G 93 -13.2 -3.35679 | CTCCCCCATGGATAA TTGTCCTAGAGC CTTCTCCC GCTCTAGGACAA GAAAGAATTTCCATT TERM 1250 1104642 - 1104629 - g 71 -5.3 -4.55093 | CTACAGAAGAAGAAA CAAAG AAAG CTTTG TCAGACATCTTACAT TERM 1251 1104863 - 1104893 + G 73 -6.8 -4.25104 | opp_overlap 1104864 1104867, overlap 1104864 ATCAGCTCAAAATGT ACAATGAAGCAGCC TTC GGCTTCTTCCTTGC TTTTGATGCGGAGCC TERM 1252 1104892 - 1104864 - g 73 -10.3 -2.75577 | opp_overlap 1104863 1104864, overlap 1104867 TCAGCTCAAAATGTA CAATGAAGCAGCC TTC GGCTTCTTCCTTG CTTTTGATGCGGAGC TERM 1253 1104864 - 1104892 + G 75 -10.3 -3.14848 | opp_overlap 1104864 1104867, overlap 1104863 TCAGCTCAAAATGTA CAATGAAGCAGCC TTC GGCTTCTTCCTTG CTTTTGATGCGGAGC sycD 1104481 - 1105164 + | type III secretion chaperone SycD CCA00953 1105188 - 1105586 + | hypothetical protein TERM 1254 1106769 - 1106755 - g 80 -6.4 -4.69464 | opp_overlap 1106746, overlap 1106746 1106744 AAAACAGGGCAAAAA GCCCTT TCC AAGAGC TTCCCAAAACTTTCT CCA00954 1105624 - 1107108 + | hypothetical protein TERM 1255 1107340 - 1107330 - g 81 -5.4 -5.055 | overlap 1107319 GGAACTTCTAAAAAA GAAG CGA CTTC GCAAACAACCAAAAG TERM 1256 1107548 - 1107531 - g 75 -2.6 -5.30155 | opp_overlap 1107531 GTAGTAATCAAAAAA GGCATG GGAACT CTTGCC TTATTGGGACTCATT TERM 1257 1107712 - 1107696 - g 80 -10.9 -3.35298 | CAAGCAAATCACCAA GCTTCTG CTA CAGAAGC TCAAGCTAAACAAAG TERM 1258 1107852 - 1107841 - g 73 -5.8 -4.64861 | overlap 1107843 CTTTTGCAAAAGAAA CAGC GGGT GCTG CGGGATCCGCAGCGA CCA00955 1107138 - 1108454 + | hypothetical protein TERM 1259 1108487 - 1108508 + T 72 -5.9 -4.38927 | gap 1, opp_overlap 1108487 TTAAAGTAACGCAAA GGCTCAAACA CTG TGT-TGGGCC TTTCTTATGTAAAGC CCA00956 1109438 - 1108533 - | hypothetical protein TERM 1260 1110377 - 1110365 - g 89 -6.9 -5.2166 | opp_overlap 1110365 GAAGAAGCGAAAAAA CGCGA CCA CCGCG TTTTAGGAGCAAAAC thrS 1109660 - 1111567 + | threonyl-tRNA synthetase TERM 1261 1111765 - 1111781 + G 83 -12.3 -2.70932 | TGATCCCGATTGTTA CGACAGC CTT GCTGTCG TACTTCAGGGAGAAA CCA00958 1111598 - 1112365 + | chromosome partitioning ATPase ParA, putative CCA00959 1112370 - 1113122 + | pGP6-D chromosomal paralog TERM 1262 1113628 - 1113608 - g 81 -2.5 -5.60993 | opp_overlap 1113608, overlap 1113619 TGTGGGAGAAAAAAA TCTTCAAGA AAT TCAAGAAGA TATCATATCCTTGAA CCA00960 1113126 - 1113680 + | hypothetical protein TERM 1263 1114545 - 1114529 - g 73 -2.2 -5.27938 | opp_overlap 1114529 ATGTTGAAATAAAAA CTCGTC TTGCT GAGGAG TTAATCCGCTTCTTA trpS 1113691 - 1114728 + | tryptophanyl-tRNA synthetase uvrB 1114741 - 1116711 + | excinuclease ABC subunit B TERM 1264 1117596 - 1117580 - g 71 -5.1 -4.65895 | opp_overlap 1117565, overlap 1117581 CTTGCTATCGAAAAA GCAGGTT TCC AACCTGG AGAAGACATCTCCCT TERM 1265 1117595 - 1117581 - g 70 -8.6 -3.39216 | opp_overlap 1117565, overlap 1117580 TTGCTATCGAAAAAG CAGGTT TCC AACCTG GAGAAGACATCTCCC eno 1116890 - 1118164 + | phosphopyruvate hydratase TERM 1266 1118172 - 1118210 + F 90 -8.4 -5.18726 | gap 1, opp_overlap 1118178, overlap 1118174 1118178 GAGAATAGAATCGCC TACAGATCGCTTTCTAG AAATAA CTAGAAAGCGAT-TGTC TTTTTATTCTAACAA TERM 1267 1118174 - 1118208 + F 100 -11 -4.22377 | gap 1, opp_overlap 1118178, overlap 1118172 1118178 GAATAGAATCGCCTA CAGATCGCTTTCTAG AAATAA CTAGAAAGCGAT-TG TCTTTTTATTCTAAC TERM 1268 1118178 - 1118205 + F 100 -12.9 -4.20092 | opp_overlap 1118178, overlap 1118174 1118172 AGAATCGCCTACAGA TCGCTTTCTAG AAATAA CTAGAAAGCGA TTGTCTTTTTATTCT TERM 1269 1118205 - 1118178 - f 87 -12.9 -2.88758 | opp_overlap 1118178 1118174 1118172 AGAATCGCCTACAGA TCGCTTTCTAG AAATAA CTAGAAAGCGA TTGTCTTTTTATTCT CCA00964 1118413 - 1120320 + | regulatory protein, putative TERM 1270 1121913 - 1121893 - g 91 -10.5 -4.57073 | opp_overlap 1121893 TAGCCTTTTTAAAAA GACAGGAAA CCT TTTCCCGTC TTGCTTCACCCACTA TERM 1271 1121893 - 1121913 + G 70 -8.3 -3.34013 | opp_overlap 1121893 TAGCCTTTTTAAAAA GACAGGAAA CCT TTTCCCGTC TTGCTTCACCCACTA CCA00965 1120317 - 1122140 + | hypothetical protein TERM 1272 1123172 - 1123188 + G 71 -6.5 -4.28548 | overlap 1123174 TTCACGCACGCCAGG CAGCGCT TAC AGCGCTA TTTTGCTACCTACGT TERM 1273 1123174 - 1123186 + G 76 -9.1 -3.745 | overlap 1123172 CACGCACGCCAGGCA GCGCT TAC AGCGC TATTTTGCTACCTAC TERM 1274 1124878 - 1124859 - g 71 -4.2 -5.00616 | overlap 1124862 TGTTTGGGTAAAAAA CCACCAGG ATTT CCTAGCAG ATACTGTGCTAAATC TERM 1275 1125274 - 1125297 + G 84 -10.4 -3.95435 | opp_overlap 1125271 1125274, overlap 1125269 CATCTTTTTAAAGGA TTGCTGATGG AAAG CTATCAGCAA TTGTATTTTGAAGAA CCA00966 1122718 - 1125609 + | hypothetical protein sdhB 1126397 - 1125606 - | succinate dehydrogenase iron-sulfur subunit TERM 1276 1125686 - 1125719 + g 90 -9.1 -5.00616 | gap 1, overlap 1125687 ATTTAGAAATATCTC TTCCCATTG-CAGAAA TAC TTTCTGTTAATGGGAG TTTTTTAGGGCACAC TERM 1277 1125687 - 1125718 + g 79 -10.4 -3.60048 | gap 1, overlap 1125686 TTTAGAAATATCTCT TCCCATTG-CAGAAA TAC TTTCTGTTAATGGGA GTTTTTTAGGGCACA sdhA 1128295 - 1126412 - | succinate dehydrogenase flavoprotein subunit CCA00969 1129193 - 1128300 - | succinate dehydrogenase, cytochrome b558 subunit, putative TERM 1278 1128914 - 1128898 - G 71 -9.5 -2.83747 | overlap 1128895 GAAGCCCCAGAATTA CTTTTCC CTT GGAAAAG ATAGACAATGCCTAT CCA00970 1130089 - 1129289 - | TatD family deoxyribonuclease TERM 1279 1130230 - 1130207 - R 100 -12.6 -5.88197 | TTAAAGACAAAAAAA GGGTGTATTT ATTC AAATACACCC AACAAAATCCTATCT CCA00971 1132395 - 1130257 - | thiol:disulfide interchange protein DsbD TERM 1280 1131833 - 1131863 + g 74 -9.3 -3.59262 | gap 1, overlap 1131835 AATAGACGGGGTTGA GAT-TGTAGAGTTT GAGC AAACTCTACAGATC TTTCAGGATGTAAGG TERM 1281 1131835 - 1131860 + g 70 -9.9 -2.62171 | overlap 1131833 TAGACGGGGTTGAGA TTGTAGAGTTT GAGC AAACTCTACAG ATCTTTCAGGATGTA CCA00972 1132565 - 1133263 + | MotA/TolQ/ExbB proton channel family protein CCA00973 1133260 - 1133667 + | ExbD/TolR family protein TERM 1282 1133886 - 1133874 - g 82 -4.1 -5.36364 | overlap 1133875 GCAAAAATAGAAAAA CCTCA CGT TGAGA AACCCCCTCAACAAC CCA00974 1133670 - 1134431 + | hypothetical protein tolB 1134451 - 1135734 + | translocation protein TolB CCA00976 1135745 - 1136320 + | peptidoglycan-associated lipoprotein CCA00977 1136310 - 1136927 + | LysM domain-containing protein CCA00978 1137026 - 1137424 + | hypothetical protein CCA00979 1138011 - 1137421 - | anti-oxidant AhpCTSA family protein groEL 1139883 - 1138273 - | chaperonin GroEL TERM 1283 1139485 - 1139499 + g 70 -8.6 -3.27022 | opp_overlap 1139484 ACTTATCTTAACTAC GAGCTT CGC AAGCTC TTCATCTAACATAGC TERM 1284 1139920 - 1139937 + r 70 -8.4 -3.28712 | opp_overlap 1139920 1139919 1139933 AACTTCAGGGATAAG GCGACC CTATAA GGTCGC TTATAGAAACAACAA TERM 1285 1139937 - 1139920 - R 72 -9.1 -2.6176 | opp_overlap 1139920, overlap 1139919 1139933 AACTTCAGGGATAAG GCGACCC TATA AGGTCGC TTATAGAAACAACAA CCA00981 1141226 - 1139994 - | hypothetical protein TERM 1286 1140097 - 1140116 + g 73 -2.2 -5.22006 | ATAATATACCGCTCG TTTTGACA AACA TGTAAAAA TTTTTCTTCTCCTAA TERM 1287 1141031 - 1141012 - G 70 -8 -3.77846 | overlap 1141015 CACAAGATACTCAAA GAACATAA ATCT TTATGTTC GCGAAAAACAGATAG TERM 1288 1141225 - 1141209 - G 70 -2.9 -5.17786 | overlap 1141210 CAATAAAATGAAAAA CGAGCGT ATA ACTCTCA TAACACCTATCTGAC TERM 1289 1141270 - 1141250 - H 72 -2.5 -5.31275 | opp_overlap 1141250 TCTGACTATAAAAAA CAACATTCT GAT AGTTTGTTG TTAGTTAGGTACTGC CCA00982 1141462 - 1142082 + | putative deoxyribonucleotide triphosphate pyrophosphatase CCA00983 1142298 - 1142065 - | hypothetical protein ung 1142984 - 1142295 - | uracil-DNA glycosylase TERM 1290 1142438 - 1142423 - G 73 -7.6 -4.07568 | GTGGCGCTGTTAAAA TCGCAT GTTT ATGCGA GGAATGAAAAAGTAA TERM 1291 1144280 - 1144294 + G 80 -10 -3.74251 | opp_overlap 1144280 ATGTTCTCTGCCAAA TGCGAC GTT GTCGCA TTTGATAGAACTGTA TERM 1292 1144294 - 1144280 - g 79 -10 -3.53091 | opp_overlap 1144280 ATGTTCTCTGCCAAA TGCGAC GTT GTCGCA TTTGATAGAACTGTA pcrA 1143095 - 1145008 + | ATP-dependent helicase PcrA TERM 1293 1145079 - 1145043 - g 75 -8 -4.10855 | gap 1, opp_overlap 1145042 1145069 AAAACTTTCTCAAAA CTACCTTCCCTCGCTGC GTAT GCAGC-AGGGATTGCAG ATGTTGCAATCTCCA CCA00986 1145011 - 1146282 + | RNA polymerase factor sigma-54 CCA00987 1147101 - 1146304 - | hypothetical protein TERM 1294 1146572 - 1146555 - G 74 -9.1 -3.56569 | CGAGAATACAAGCAA GGCCTCC TAAG GGAGACC ATAAACTTAATCCCA TERM 1295 1149119 - 1149062 - g 100 -14.5 -5.5353 | gap 1, opp_overlap 1149062 1149063, overlap 1149066 TATACGAAGAAAAAA TCGATGATGATGTAGCTGAAGAAGAGAA CCT TTCTCTTCCTCAGCTACATGCTCAA-GA TGTTTTAGATAAAGA TERM 1296 1149062 - 1149119 + G 90 -12.3 -3.69216 | gap 1, opp_overlap 1149062 1149066, overlap 1149063 TATACGAAGAAAAAA TCGATGATGATGTAGCTGAAGAAGAGAA CCT TTCTCTTCCTCAGCTACATGCTCAA-GA TGTTTTAGATAAAGA TERM 1297 1149116 - 1149066 - g 100 -20.8 -2.99438 | opp_overlap 1149062 1149063, overlap 1149062 CGAAGAAAAAATCGA TGATGATGTAGCTGAAGAAGAGAA CCT TTCTCTTCCTCAGCTACATGCTCA AGATGTTTTAGATAA topA 1147744 - 1150329 + | fused DNA topoisomerase I/SWI domain-containing protein CCA00989 1151324 - 1150305 - | nifR3 family TIM-barrel protein TERM 1298 1150537 - 1150558 + g 76 -3.1 -5.24989 | gap 1, overlap 1150525 TGTTGAATAAATGCT TGT-TTTCTC GTT GAGAAAGGCA TTTTTTCATATGTCC CCA00990 1151599 - 1151303 - | YGGT family protein TERM 1299 1152311 - 1152292 - g 77 -5 -4.87665 | TTCTATCGAGAAAAA TAGTGAGG ATAT CCTTACTA CACTAGATTACGTAA TERM 1300 1152343 - 1152363 + G 83 -12.7 -2.63631 | opp_overlap 1152334 1152329 AGAAACCTACCCTTC TGTAGAGCT GAC AGCTCTACA TACTGTGCAGCTTCC CCA00991 1151696 - 1153096 + | hypothetical protein CCA00992 1153093 - 1153677 + | hypothetical protein TERM 1301 1153904 - 1153892 - g 70 -3.3 -4.87665 | opp_overlap 1153901 GCGTATGTATAAAAA TACGC TGG GCGAA AACGTTTCGTGTTTA TERM 1302 1154326 - 1154303 - g 77 -8.2 -4.19276 | opp_overlap 1154308 1154319, overlap 1154304 TCAAAACGGGGAAAA GCATAGCGTA TCCA TACGCTATGA TGAGCGTTCTAACAG TERM 1303 1154325 - 1154304 - g 83 -11.7 -3.10843 | opp_overlap 1154308 1154319, overlap 1154303 CAAAACGGGGAAAAG CATAGCGTA TCCA TACGCTATG ATGAGCGTTCTAACA CCA00993 1153668 - 1154945 + | hypothetical protein CCA00994 1154948 - 1155490 + | 5-formyltetrahydrofolate cyclo-ligase, putative recA 1155893 - 1156945 + | recombinase A TERM 1304 1156959 - 1156995 + T 95 -12.5 -3.67976 | AGACTATCCTCTTTG GATTCTCCTTCTCTT ATTTACA AAGAGAAGGAGAACC TTTCAAATTAATGAC CCA00996 1157731 - 1157003 - | coenzyme PQQ synthesis protein c, putative CCA00997 1158482 - 1157748 - | hypothetical protein TERM 1305 1158222 - 1158242 + gr 74 -6.1 -4.33621 | CTCATCAATACCTGC CGAGGGAAT CAA AATCCCTTG TTTCTTAGTTAGATA folA 1158942 - 1158454 - | dihydrofolate reductase folKP 1160278 - 1158935 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate synthase folB 1160616 - 1160275 - | dihydroneopterin aldolase rpoD 1162403 - 1160685 - | RNA polymerase sigma factor TERM 1306 1160923 - 1160906 - G 74 -6.3 -4.47217 | opp_overlap 1160922 AACGATGAATCAAAA CAAATCG CTCA CGATCTG TAAGAGTTTTTAAAA TERM 1307 1161102 - 1161065 - G 85 -8.5 -4.41348 | gap 1, overlap 1161067 1161090 CTGCCTGTAAAGAAA TAGGGTGCTGGGCAATTT TAT AAATCTCCC-GCACCCGA TCAGGAGTTAATCCT TERM 1308 1161100 - 1161067 - G 86 -11.1 -3.81557 | gap 1, overlap 1161065 1161090 GCCTGTAAAGAAATA GGGTGCTGGGCAATTT TAT AAATCTCCC-GCACCC GATCAGGAGTTAATC CCA01002 1163719 - 1162514 - | hypothetical protein TERM 1309 1163212 - 1163179 - G 100 -14.8 -3.15249 | opp_overlap 1163168, overlap 1163182 1163202 GATATTCTTCATTAA GAACTTGCTGATAC GCCAAA GCATCAGCAAGTTC ACGATTAAGCTGCTG TERM 1310 1163209 - 1163182 - G 83 -10.7 -3.72027 | overlap 1163179 1163202 ATTCTTCATTAAGAA CTTGCTGATAC GCCAAA GCATCAGCAAG TTCACGATTAAGCTG TERM 1311 1163807 - 1163826 + H 70 -4.4 -4.66625 | overlap 1163808 TAAGGTTAGTTCTAT TTTTTATG TTCG CATAAAAG TTTATTTATCTCTCT TERM 1312 1164160 - 1164144 - g 73 -2.3 -5.19212 | overlap 1164153 ACTATGATGAAAAAA TTTGAAG CAG CTTTAAA AGCTGGTGATCAATC rpsT 1164009 - 1164305 + | 30S ribosomal protein S20 CCA01004 1164320 - 1165240 + | hypothetical protein TERM 1313 1165257 - 1165247 - T 73 -4 -5.06414 | opp_overlap 1165248, overlap 1165248 GGTTTCTAATAAAAA TCTT CAA AAGA AGCTATTTATTCTAC TERM 1314 1165272 - 1165293 + T 100 -10.9 -5.70829 | AAGCTATTTATTCTA CCCCATAAG TATA CTTGTGGGG TTTTTTTATGATCTT recD 1166769 - 1165264 - | exodeoxyribonuclease V, alpha subunit TERM 1315 1165973 - 1165985 + g 79 -4.9 -5.05712 | opp_overlap 1165973 CCTAGTATAATTAAA TTATC GGC GATAA TTTTTCCTTCTTTGT TERM 1316 1166437 - 1166424 - G 74 -5.3 -4.73677 | opp_overlap 1166424, overlap 1166416 GTGATAACAAAGAAA GCTTT GAAA AAAGC TTTTCTCGAACTGCA CCA01006 1168629 - 1166785 - | hypothetical protein TERM 1317 1167506 - 1167516 + g 73 -5.4 -4.49041 | GTTTGTTGAGCTTTT GTAG TTT CTAC TTCTTTTACTTTTTT TERM 1318 1168299 - 1168285 - G 79 -5 -5.06816 | ATCCTCTAAGAAAAA CGCATT GAG AATACG CCCCCCTAGCACCTC tctD 1168830 - 1169531 + | transcriptional regulator CCA01008 1169603 - 1170217 + | LpxA family transferase TERM 1319 1170818 - 1170792 - g 84 -2.2 -5.84381 | opp_overlap 1170796, overlap 1170795 1170796 TCATCAATAAAAAAA CAGGCGCTCTTT TCG AAATAGCGTGTG TCTCTGGTTGGTTAT ispA 1170233 - 1171114 + | geranyltranstransferase CCA01010 1171477 - 1171223 - | hypothetical protein TERM 1320 1171321 - 1171338 + g 70 -9.9 -2.63858 | overlap 1171320 1171335 TTTCTAAAGAATCCC CTGCAGA TACA TCTGCAG ATTCTAAATCTACTG CCA01011 1173152 - 1171560 - | hypothetical protein TERM 1321 1171790 - 1171770 - G 72 -4.7 -4.71061 | ATTGATATGGAAAAA CCAGCGTAT ATT ATAAGCTAG AGGAACGACATATTG TERM 1322 1173211 - 1173198 - H 70 -3.9 -4.9218 | overlap 1173206 CATGGATTAGAAAAA CAAAA ACGT TTTTG CTTAAAAAATCCTGT CCA01012 1173237 - 1173386 + | hypothetical protein SEQUENCE gi|29839220|ref|NC_004720.1| Chlamydophila caviae GPIC plasmid pCpGP1, complete sequence (length 7966) CCAA00001 675 - 1415 + | virulence protein pGP6-D TERM 1 1439 - 1450 + F 71 -3 -5.07107 | opp_overlap 1433 1439 AGCAGCAAATAAAAA GTAT TAAT ATAC TTTTTTAAGAATTTA TERM 2 1450 - 1439 - f 74 -3 -5.34309 | opp_overlap 1439, overlap 1433 AGCAGCAAATAAAAA GTAT TAAT ATAC TTTTTTAAGAATTTA TERM 3 1912 - 1896 - g 76 -7.3 -4.14392 | opp_overlap 1896, overlap 1899 TCTGAAGCTTCAAAA CAAGCTA GAG CAGCTTG TTATATCTCTTTTAC CCAA00002 1638 - 2561 + | virulence plasmid integrase pGP7-D CCAA00003 3629 - 2622 - | virulence plasmid integrase pGP8-D TERM 4 3444 - 3425 - G 76 -7.2 -4.19238 | TCTCTAATGCTAAAA CAGATCCT TTAT AAGATCTG GCTGTATGATTATTT CCAA00004 3733 - 5109 + | virulence plasmid replicative DNA helicase pGP1-D TERM 5 5918 - 5902 - g 91 -9.5 -4.51238 | opp_overlap 5904 CTGACAAAATAGAAA TAGGGTT TGA AACCCTA TCCTACACCTTAAGG TERM 6 6053 - 6071 + G 71 -3.9 -4.90778 | AATTCAAGGTAAAAC CATTTCT AAAAA AGAAGTG TTTTATTTGAATAAA CCAA00005 5103 - 6146 + | virulence protein pGP2-D TERM 7 6377 - 6354 - g 73 -8.2 -3.94402 | opp_overlap 6355, overlap 6355 ATAACCGCTAAAGAA GGTCTCAAAG TAGA CTTTGAGACT GCAGATAGCAATAAT TERM 8 6376 - 6355 - g 82 -11.7 -2.95918 | opp_overlap 6355, overlap 6354 TAACCGCTAAAGAAG GTCTCAAAG TAGA CTTTGAGAC TGCAGATAGCAATAA CCAA00006 6201 - 6995 + | virulence protein pGP3-D TERM 9 7011 - 6989 - f 80 -6.4 -4.82212 | CAAACAACAAACAAA CGGTTAATAA AAG TTATTAAACG ACCTAATTAAAATAT CCAA00007 7093 - 7401 + | virulence protein pGP4-D