TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.599915 %AT, 1044432 nt, 7850 terms. Intergenic: 0.660464 %AT, H2T: 126971 nt, 729 terms; T2T: 29457 nt, 403 terms; H2H: 57089 nt, 640 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|89897807|ref|NC_007899.1| Chlamydophila felis Fe/C-56, complete genome (length 1166239) TERM 1 522 - 534 + G 70 -9.1 -3.25823 | opp_overlap 518 TCTATAGGAGAGTTG GGTGG AGC CCACC TTGCTATGGAAAGCG TERM 2 1698 - 1681 - g 70 -2.7 -5.07941 | AAAATTACAGAAAAA TAGCGAT AGAC ATGGCTA AAGAGGTAATTAGAT CF0001 216 - 1808 + | hypothetical protein CF0002 1890 - 2144 + | hypothetical protein ispA 3125 - 2253 - | geranylgeranyl pyrophosphate synthase TERM 3 2716 - 2738 + g 71 -7 -4.05875 | TAGGCAAAATCTACT TCTCGGGG ATCTACA CCCTGAGA TTTGAGTTTTTTAGC glmU 3765 - 3151 - | UDP-GlcNAc pyrophosphorylase ompR 4537 - 3839 - | two-component system regulator llrA TERM 4 4715 - 4695 - H 74 -5.6 -4.67173 | overlap 4706 CAAGTTAAAAAACAA TTAAAAAC AAGCG GTTTTTAA CAAAGCCGGTAGGGG TERM 5 5067 - 5081 + G 70 -2.8 -5.11063 | overlap 5068 GAGTTGATCGGCGGA CGCATT CTT AATGCC TTTTTCTTAGATAAT TERM 6 6311 - 6326 + G 74 -4 -5.00895 | opp_overlap 6302 AGAAATTGCCAACTT TTTAGC AGAC GCTGAA TTTTTATATGCTCAG CF0006 4737 - 6581 + | hypothetical protein TERM 7 7562 - 7540 - g 71 -5 -4.57073 | GATTGTGTGCAAAAA TTTTCCAA GGCTATA TTGGAAAA ACAAACAATTCCCTT TERM 8 8095 - 8074 - g 100 -10.9 -5.67967 | AGGATCATAAAAAAA CCCCACAAG TATA CTTATGGGG TAAAATAAACAGCTT recD1 6616 - 8103 + | ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V alpha CF0008 8969 - 8127 - | hypothetical protein rpsT 9297 - 9001 - | 30S ribosomal protein S20 pkaA 9615 - 9346 - | protein kinase A anchoring protein 9 TERM 9 9498 - 9479 - GH 72 -4.4 -4.68132 | overlap 9480 GAAGAGATAAATAAA CTTTTATG CGAA CATAAAAA AAATAGAATTAATCG CF0010 9589 - 10794 + | hypothetical protein TERM 10 11054 - 11081 + G 70 -7.8 -3.63367 | gap 1, opp_overlap 11058 11072, overlap 11056 11072 TCCAATGTCATTCGA CA-CACCTGAACA AAT TGATCAGGTGCTG ATTTTTCTTGCGGGA TERM 11 11056 - 11078 + G 76 -10.6 -2.62714 | opp_overlap 11058 11072, overlap 11054 11072 CAATGTCATTCGACA CACCTGAACA AAT TGATCAGGTG CTGATTTTTCTTGCG TERM 12 11072 - 11082 + G 81 -5.4 -5.06414 | opp_overlap 11058 11072, overlap 11056 11054 ACCTGAACAAATTGA TCAG GTG CTGA TTTTTCTTGCGGGAA TERM 13 11881 - 11866 - g 72 -3.2 -5.05153 | opp_overlap 11867, overlap 11867 AGGCCAAAAAAGAAA TGGTTG AGTC CAACCT CCGTTTAGTGATTTC TERM 14 11915 - 11927 + G 70 -7.7 -3.74101 | opp_overlap 11914 11915 AGCTAAAAAATATAC CAACC GAG GGTTG TCTTTCTTAGATTTG rpoD 10911 - 12623 + | RNA polymerase sigma factor folB 12692 - 13033 + | dihydroneopterin aldolase TERM 15 14102 - 14076 - g 95 -13.9 -3.78775 | opp_overlap 14069 GGCTTTAGGATTAAA CCTGGATCAAA TTATT TTTGATCCAGG CATAGGCTTTGGGAC folP 13030 - 14373 + | folate synthesis bifunctional protein TERM 16 14437 - 14419 - gf 71 -7.4 -3.59979 | opp_overlap 14430 TGGGGTGATTGGAAA CCAAGGAA AGT TGCCTTGG AGCTATTCTAAGGAC folA 14366 - 14854 + | dihydrofolate reductase oxr1 14826 - 15560 + | oxidoreductase pqqC 15577 - 16281 + | coenzyme PQQ synthesis protein C recA 17391 - 16339 - | recombinase A ygfA 18347 - 17805 - | formyltetrahydrofolate cycloligase TERM 17 17880 - 17907 + g 80 -2.1 -5.60993 | opp_overlap 17880 17881 TTTTTGTTCTTTAAA TCC-CACACCTAT GGTG ATGGG-GTGCGGA TTTTTTTCTAACCAA pi4K 19627 - 18350 - | phophatidylinositol-4-phosphate 5-kinase TERM 18 18977 - 18991 + g 71 -5 -4.61231 | overlap 18968 18979 ACGTTCTTCATAGCG TATGGA TAT TCCATG TTTTTCACCGTCTAA CF0021 20202 - 19618 - | hypothetical protein CF0022 21596 - 20199 - | hypothetical protein TERM 19 21250 - 21260 + g 75 -8.2 -4.12841 | ATCCATAAAGTTACT GGGG TTT CCCC TTTCTCATTCCTTTT TERM 20 21345 - 21357 + g 100 -3.5 -6.47325 | TAAATCTGTTAAAGC TATTT TTA AAATA TTTTTTTTATTTTTT ylmG 21694 - 21990 + | integral membrane protein TERM 21 22838 - 22806 - g 85 -11.5 -3.31415 | opp_overlap 22803 22811, overlap 22811 TACTATCAAAGTGAA GCAAAGTTTCTTTGT GAA ACAAGAAAACTTTGC GGACATTATCTCATA oxr3 21969 - 22988 + | dehydrogenases topA 25552 - 22964 - | fused DNA topoisomerase I/SWI domain-containing protein TERM 22 24180 - 24230 + g 73 -8.4 -3.77157 | overlap 24181 TTATCTAAAATATCT TGAGCGTGTAGCTGAGGAAGAGAG GGG TTTTCTTCTTCGGCTACATCATCG TCTATTTTTTCTTCG TERM 23 24181 - 24229 + g 71 -9.7 -2.84667 | overlap 24180 TATCTAAAATATCTT GAGCGTGTAGCTGAGGAAGAGAG GGG TTTTCTTCTTCGGCTACATCATC GTCTATTTTTTCTTC TERM 24 26030 - 26044 + H 70 -3.6 -4.87318 | GCAAGAAAACTTTAA TAAGAA TCT TTCTTG TTTTTGAATTTTGGA TERM 25 26350 - 26371 + G 83 -7.3 -4.8048 | overlap 26352 GATTCTCCTACCGAT TTTCCTGCG CGAT TGCAGGAGA TTTTTGATATCAACC CF0026 26191 - 26988 + | hypothetical protein rpoN 28277 - 27009 - | RNA polymerase factor sigma-54 TERM 26 27577 - 27587 + g 81 -5.4 -5.15634 | CTAATTTGAATTTCC CAAC CCT GTTG TTTTTTAGTGACATA uvrD 30190 - 28280 - | DNA/RNA helicase TERM 27 30240 - 30228 - H 84 -5.5 -5.47218 | TCCGACTGAAAAAAA TCAGG ATC CCCGA AGCTAAAATAATCTA TERM 28 30422 - 30409 - g 73 -8.1 -3.89614 | GGGAATTTTTACAAA CCGAG TATT CTCGG ACAACAGTTTATCCC TERM 29 30894 - 30908 + G 93 -7 -5.39221 | CATCCTTCTCCTTTA GCAGCG CAC CGCGGC TTTTTTGGTTGTTCT ung 30303 - 30992 + | uracil-DNA glycosylase CF0030 30989 - 31222 + | hypothetical protein TERM 30 31217 - 31203 - T 79 -8.6 -3.87641 | opp_overlap 31196 31204 31212 AACATTCGTTAGAAA CTCTAG TTC CTAGAG ACTAGATGTTTTTCC hamA 31825 - 31205 - | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 31 32063 - 32079 + G 70 -2.9 -5.17786 | overlap 32064 GGTAGATCAGTGTTA TGAGAGT TAT ACGCTCG TTTTTAATTTTATTA TERM 32 32362 - 32333 - g 77 -9.9 -3.53012 | opp_overlap 32336 CGGCTCCTGCTGAAA CCCCCGGATTTGC TCCC GCCATTCCGGGAG GGCGTGCGGTATCCT TERM 33 33247 - 33226 - g 82 -3.7 -5.40072 | TGGCCGTTAAAAAAA TTGTGCCTC GATG GAAGAACAA AATTTCAAAATATAC CF0032 32062 - 33303 + | hypothetical protein TERM 34 34035 - 34061 + G 70 -3.1 -4.85918 | gap 1, opp_overlap 34024, overlap 34037 CGCATCCAGAGACTA TGGAAGTCATCT ATGA GGATG-CTTCTA TTTTATTGTGTAATC TERM 35 34092 - 34110 + G 70 -3.2 -5.00616 | AGAAACTATCCTGTT TGAATCAA TCG TTTATTCA TTTTTTAGACCAAAC TERM 36 34160 - 34181 + G 95 -13.1 -3.69083 | opp_overlap 34155 CCTCTAATTATTATT GCTGAGGAT TTTG ATCCTCAGC TTCTATCTATATTAA TERM 37 34641 - 34657 + G 75 -10.1 -3.02324 | overlap 34647 CATTTAAAGAAGGTT GTCTCCC AGG GGGAGGC TCTGCTTTAGCTCGC groEL 33407 - 35041 + | chaperonin GroEL ahpC 35248 - 35865 + | thio-specific antioxidant peroxidase CF0035 36260 - 35862 - | hypothetical protein ami2 36974 - 36360 - | N-acetylmuramoyl-L-alanine amidase TERM 38 36438 - 36451 + g 72 -4.5 -4.82128 | ATTAAGTTTTTTTAA TTCCG CGAC CGGGA TTTTATATTTCGTAG omp01 37539 - 36964 - | outer membrane protein tolB 38863 - 37550 - | translocation protein TolB exbF 39608 - 38853 - | energy transducer exbD 40018 - 39611 - | energy transducer TERM 39 39735 - 39717 - G 70 -5.9 -4.44667 | overlap 39718 TCTTGCAATAACAAA GGCACCC TATTT GGGTGCT GCTGATGTAAAAGAG TERM 40 39734 - 39718 - G 73 -9.4 -3.26318 | overlap 39717 CTTGCAATAACAAAG GCACCC TATTT GGGTGC TGCTGATGTAAAAGA tolQ 40713 - 40015 - | biopolymer transport proteins trxA1 40843 - 43026 + | thioredoxin TERM 41 43055 - 43080 + F 100 -14.9 -5.33866 | ACTCGTCTTATTTTT GGGGTGTATTT GTAT AAATACACCCC TTTTTTGTCCCTTTG TERM 42 43119 - 43108 - f 76 -4.4 -5.1356 | opp_overlap 43108 TTGTATTAAGAAAAA CTTC CCTC GAAG TCGATTCTTTTGAAG yabD 43197 - 43997 + | deoxyribonuclease TERM 43 44207 - 44234 + G 71 -6.4 -4.20953 | TTACGTTGTTTCTCT GCGAGCATAT ATTTACTA ATATGCTTGC TTCTTCTTATTTTAA TERM 44 44737 - 44747 + G 72 -3.2 -5.11389 | overlap 44723 CTTCTTACATCTAAT GTAG GGA CTGC TTTTCTTTATATTGT sdhC 44092 - 44985 + | subunit of succinate dehydrogenase sdhA 44990 - 46873 + | succinate dehydrogenase flavoprotein subunit TERM 45 47600 - 47566 - g 93 -10.8 -5.02074 | GTATGTCCTAAAAAA CTTCCCTTAACAGAAA GTA TTTCTGCAATGGGAAG AGATGTGGCCAAATA sdhB 46888 - 47679 + | succinate dehydrogenase iron-sulfur subunit CF0047 50567 - 47676 - | hypothetical protein TERM 46 50984 - 51002 + G 73 -6.7 -4.26076 | TTGATTTTCATTGGT TTGGCGG CAACC TCGCCAA TTTTCGTGACCATCA CF0048 50846 - 51157 + | hypothetical protein rsbU 52963 - 51143 - | regulator of sigma subunit rbsU 54867 - 52960 - | sigma regulatory RsbW antagonist TERM 47 54813 - 54782 - G 71 -9.6 -2.82015 | opp_overlap 54788, overlap 54792 54811 CTGATATTGAGTAGA GCGATATTAATCCC TAAA GGAATTAATATTGC AGCTACGCATGCTAG TERM 48 54836 - 54848 + g 80 -6.3 -4.82901 | opp_overlap 54836 CATGCTAGCCATAAA CGATA GCC TATCG TTTTTGTAAAAGGAA TERM 49 55120 - 55084 - R 77 -6.1 -4.70659 | gap 1, overlap 55089 TTGTATAGGGAAAAA GATAATCGCTTTCTAG GAGTAA CTAGAAAGCGA-TATA AAAGCGACTCTATTC TERM 50 55116 - 55089 - R 100 -12.9 -4.09353 | overlap 55084 TAGGGAAAAAGATAA TCGCTTTCTAG GAGTAA CTAGAAAGCGA TATAAAAGCGACTCT eno 56404 - 55130 - | phosphopyruvate hydratase TERM 51 55622 - 55635 + g 87 -5.3 -5.52079 | TTGTTCTTGATAGCT CTTAC CCTC GTAAG TTTTTGTTTTGGTAT uvrB 58539 - 56569 - | excinuclease ABC subunit B TERM 52 57625 - 57642 + g 72 -8.5 -3.5627 | TTTTGTAAAGTGTCG GGAATAG TTTT CTATTCC TTTACAAAATCCTGT trpS 59590 - 58553 - | tryptophanyl-tRNA synthetase TERM 53 58751 - 58735 - G 70 -7.9 -3.75686 | TTAAGAAAAGGATAA GCTCCTC AGC GAGGCGC GCCTTTACTTCAATG ebp01 60157 - 59603 - | hypothetical protein TERM 54 60007 - 59993 - G 70 -2.9 -5.06451 | opp_overlap 59993 GAGCATTTCAAAAAA GAAAT TCGCG ATTTC TTGTTGGCCATTAGA gp6D 60912 - 60160 - | chlamydial plasmid protein pGP6-D-related protein parA 61684 - 60917 - | chromosome partitioning ATPase TERM 55 61015 - 61001 - G 70 -5.6 -4.37092 | opp_overlap 60991, overlap 61003 AGGTGCTGTAGAAAA TACGGG TTT CCCGTG AATGGCGGCTTCAGA TERM 56 61013 - 61003 - G 73 -8.2 -3.79419 | opp_overlap 60991, overlap 61001 GTGCTGTAGAAAATA CGGG TTT CCCG TGAATGGCGGCTTCA thrS 63621 - 61714 - | threonyl-tRNA synthetase TERM 57 61883 - 61895 + g 83 -3.3 -5.63103 | TTTACTTGCATATTT TGCGC GTT GCGGA TTTTTTTACTTACGG rhaT1 63828 - 64736 + | cationic amino acid transporter TERM 58 64784 - 64762 - T 93 -7.7 -5.71712 | opp_overlap 64761 64762, overlap 64763 CTTTACATAAAAAAA GCCCAACAC AACTA GTGTTGGGA CCTTCTTAGCTTTTA TERM 59 64783 - 64763 - T 93 -11.2 -4.01943 | opp_overlap 64762 64761, overlap 64762 TTTACATAAAAAAAG CCCAACAC AACTA GTGTTGGG ACCTTCTTAGCTTTT srpA2 66135 - 64816 - | wall surface anchor family protein TERM 60 65415 - 65429 + g 70 -5.6 -4.41348 | opp_overlap 65405, overlap 65417 65424 AACTAGCTGCAGACC CGGCAG CAC CTGCGG TTTCTTTCGCAAAAG srpA3 67644 - 66163 - | wall surface anchor family protein TERM 61 66524 - 66547 + g 84 -8.2 -4.66609 | GCAAGCGCTTTTTGT CCTGTCTGGA AAAT TTTAGACAGG TTTTTCGATAAGGTC TERM 62 66774 - 66803 + g 82 -11.4 -3.2614 | overlap 66755 CTGCCGTTGCGGCGG CGGCAGCTGCTG TAGCTC CAGCGGCTGCGG TTCCTATAAGACCTA CF0061 68067 - 67684 - | hypothetical protein lcrH1 68774 - 68091 - | type III secretion chaperone low calcium response protein H TERM 63 70387 - 70400 + G 82 -3.8 -5.35815 | ATGTTTAGAGGTTAC TCCC CAAGAA GGGA TTTTTCTTTCGTCTC mutL 69002 - 70744 + | DNA mismatch repair protein pepP 70748 - 71818 + | aminopeptidase P TERM 64 71902 - 71914 + F 75 -4.9 -4.91473 | TTTTTTCTCTAATCG GTTAT CTT ATAAC TTTATTTTTGGCTTG TERM 65 72081 - 72109 + G 71 -9.5 -2.89743 | opp_overlap 72080 72070, overlap 72070 72094 GAAACCAAAGATATT CCCCCAAATAGGG GAC CTCTCTTCGGGGG TCTGGTCTCTGGATT CF0065 71938 - 73251 + | hypothetical protein TERM 66 73350 - 73371 + G 71 -7.3 -3.88137 | TTCAGAAAAAGCCGC CTCCTTGGA AAAC TCCAAAGAG TTTATAGACAGTTCT TERM 67 74426 - 74444 + G 70 -8.8 -3.3095 | opp_overlap 74425 74422, overlap 74429 TTGCTGGTAAAGATG GAGGGGGG GTG CCCTCTTC TTCTGCGGAATCTAT gspD 73252 - 75519 + | general secretion pathway protein D gspE 75506 - 77002 + | general secretion pathway protein E TERM 68 77142 - 77156 + G 72 -10 -2.62983 | GCTTTTATCCATTCG CGAGGT AGC ACCTCG TCGTGTGCGAGTAAA gspF 77014 - 78189 + | general secretion pathway protein F omp02 78195 - 78587 + | outer membrane protein CF0070 78596 - 79033 + | hypothetical protein CF0071 79018 - 79569 + | hypothetical protein TERM 69 79769 - 79751 - g 75 -3 -5.28315 | opp_overlap 79751, overlap 79753 AGAAAAGTCAAAAAA GATCTCCG CTA CGGAGAAG ATTTCTAGAGATAAG TERM 70 79767 - 79753 - g 89 -10 -4.24654 | opp_overlap 79751, overlap 79751 AAAAGTCAAAAAAGA TCTCCG CTA CGGAGA AGATTTCTAGAGATA TERM 71 80118 - 80130 + G 73 -7.7 -3.90318 | overlap 80113 ACTTTGCCATCTCGA GAAGC CGA GCTTC TTTATACCATGCTAC TERM 72 80197 - 80177 - g 70 -7.7 -3.74747 | CCAATCCTTATTAAA TTTCCTTCA CTA TGAAGAAAA ACCCCAAGGGTTGAT TERM 73 80519 - 80543 + G 75 -10.1 -3.04443 | overlap 80517 TATTTATCTCATTGA TCCAGAAACAG GAT CTGTTTCTCGA TGTCGTTGTTCTCCA CF0072 79572 - 80576 + | hypothetical protein TERM 74 80589 - 80604 + F 89 -3.4 -5.89827 | TAGTTAAAAATTTCT TATTTA TCTT TAAATA TTTTTTTTGATAATT TERM 75 80711 - 80696 - g 71 -4 -4.92385 | GACACCGAAAGAAAA CTCTTC TTCA AAAGAG TCGTCCTCTCAGTTT CF0073 80670 - 81119 + | hypothetical protein TERM 76 81144 - 81165 + T 100 -10.9 -5.60689 | gap 1, opp_overlap 81144 GGTTTTAACGAAAAA GGCTGCCATG TTT CA-GGCAGCC TTTTTTCTTCTCTGC TERM 77 81165 - 81144 - T 100 -10.9 -4.8622 | gap 1, opp_overlap 81144 GGTTTTAACGAAAAA GGCTGCCATG TTT CA-GGCAGCC TTTTTTCTTCTCTGC fliR 82070 - 81201 - | type III secretion flagellar biosynthesis inner membrane protein fliQ 82361 - 82077 - | type III secretion flagellar biosynthesis inner membrane protein fliP 83288 - 82371 - | type III secretion system protein TERM 78 83099 - 83128 + g 76 -4.3 -5.07523 | CATCATCAGCAGTTA CCCGTTCTCGA AATGATGG TTGAGGATGGG TTTTCTTTATCTCTG fliO 83992 - 83303 - | type III secretion system protein CF0078 84992 - 84159 - | hypothetical protein fliF1 85984 - 84992 - | type III secretion flagellar biosynthesis M-ring protein lipA 87127 - 86189 - | lipoyl synthase TERM 79 86806 - 86820 + g 90 -8.6 -5.04987 | TAAGCTGAAGAGCTT TTGCAG ATT CTGCAA TTTTTTGAGGCTCTT lpdA 88512 - 87124 - | dihydrolipoamide dehydrogenase CF0082 88773 - 89237 + | hypothetical protein snf1 92880 - 89260 - | SWF/SNF family helicase TERM 80 90516 - 90498 - G 73 -2.4 -5.26875 | overlap 90500 90501 CGTGGAATGAAAAAA TACTTACC GTG GGTAAATG CGTCGCTAATGTGTG TERM 81 90901 - 90876 - G 74 -4.9 -4.74103 | gap 1, opp_overlap 90876 90879, overlap 90878 90879 CGTCTAACTTAAAAA TATCTGTAACTG TAG CAATTACAG-TA TTTTCAGGAATCTGA TERM 82 90983 - 91002 + g 100 -5 -6.04324 | opp_overlap 90983 AAATTTAAAAATCCA GCTTTTGT AAAG GCGAAAGC TTTTTTATTTTTTAA brnQ 94144 - 92915 - | branched-chain amino acid transport system carrier protein TERM 83 93022 - 92967 - G 79 -5.5 -4.96996 | gap 1 GTTAAATAAAACAAA GCTTGGACGTGTCGGAAGTTCCAC AACTTATGA GCGATACTTCCG-CAAGTCAAAGC GATTAATGCAGGATA TERM 84 93761 - 93771 + g 75 -5.4 -4.75174 | AACAGGCAAAGTGGG CAGT AAC ACTG TTTTTGAATTCGATA TERM 85 93935 - 93908 - G 83 -3.6 -5.62219 | gap 1 AATAGAGGAAAAAAA GCTCTTATAATTC CCA GAA-TATAATAGC ATACTAAACAGGCCT nth 94950 - 94312 - | enodnuclease III trmE 96271 - 94940 - | tRNA modification GTPase TrmE psdD 96430 - 97329 + | phosphatidylserine decarboxylase CF0088 97395 - 98720 + | hypothetical protein TERM 86 98797 - 98810 + F 76 -6.7 -4.64676 | opp_overlap 98796 98797 AAGCATATAAGAGAG GGAAC TTTT GTTCC TTTTATTCACCATAA TERM 87 100501 - 100515 + G 73 -8.6 -3.71873 | TGTTTTGCAGGTTCC CACGTT TAA AACGTG TTTACGTATAGATCA secA 98906 - 101815 + | preprotein translocase subunit SecA TERM 88 101828 - 101854 + T 76 -4.2 -5.10877 | overlap 101829 TAAAAAGTACTTATA GGGCTGGGCTAG CTT CCAGCCTTTCCC TTTTTAATTTATTAT TERM 89 101829 - 101848 + T 73 -7.1 -4.02315 | overlap 101828 AAAAAGTACTTATAG GGCTGGG CTAGCT TCCAGCC TTTCCCTTTTTAATT CF0090 102401 - 101871 - | hypothetical protein TERM 90 102212 - 102224 + g 74 -9.1 -3.58269 | opp_overlap 102211 102210 CACTAATATAGAATT GGCGT ATA ACGCC TTTAAGGATGGATTC TERM 91 102433 - 102456 + r 93 -7 -5.42198 | opp_overlap 102455 AAATAATTAATTTGT TATTATTATT TTTT AATAATAATA TTTTGTTTTTTAAAC engA 103902 - 102475 - | GTP-binding protein EngA TERM 92 102788 - 102798 + g 89 -5.4 -5.40072 | GATGAGAAAATATGG CGTA AAT TACG TTTTTTTGCCGCAGA pcnB1 105257 - 104025 - | poly (A) polymerase TERM 93 104870 - 104880 + g 73 -5.4 -4.63218 | opp_overlap 104870 104872 104877 TTCTTCCTTCAACAA GATC AAA GATC TTTTCTTCGAAGGGA TERM 94 104927 - 104939 + g 83 -9.1 -4.10437 | opp_overlap 104926 TTATTGTAAAATCAC GACGC AGA GCGTC TTCTTTCATTGATGA clpX 106552 - 105287 - | ATP-dependent protease ATP-binding subunit TERM 95 105456 - 105466 + g 81 -5.4 -5.1287 | CTAGCGCCAGTTTTT GCTA GCT TAGC TTTTTTCGCTATAGC clpP 107173 - 106562 - | ATP-dependent Clp protease proteolytic subunit tig 108678 - 107353 - | trigger factor TERM 96 107873 - 107889 + g 72 -4.4 -4.77036 | opp_overlap 107870 TCTTCTAAAGATTCG GCTTGT AGCTG ACGAGC TTTTTCGTCATCGAG TERM 97 109884 - 109874 - g 71 -4 -4.8543 | CAATCTGGAGAAAAA GAAA GTT TTTC TGGGATGTTCTGTGG TERM 98 110796 - 110784 - g 75 -7.7 -4.10429 | opp_overlap 110787 110795, overlap 110795 AAGGACGCGTCAAAA CCTCT CGA AGAGG TAGGTCTGCGGGTTC TERM 99 110862 - 110904 + G 70 -5.8 -4.3739 | AAAAAATCTCTCCAG TCATTCAAATCTTTAATG AAATAGG CTTTAAAGTTTTGGATGA TTTTGTAGAAAAGTG TERM 100 111562 - 111550 - g 74 -4.9 -4.67608 | opp_overlap 111550 TACTCCAATAGAAAA TTCTT TAG AAGAA TTATGGAGTTTGTTC snf2 108974 - 112471 + | SWF/SNF family helicase mreB 112476 - 113576 + | HSP70 class molecular chaperones TERM 101 114882 - 114906 + G 70 -8.6 -3.38812 | gap 1, opp_overlap 114882 114885, overlap 114880 TTACTATTGGAGCAA GCATGTCGTCG GCAA CGACGGCA-GC TATTGTTGGCGAACA pckA 113573 - 115375 + | phosphoenolpyruvate carboxykinase TERM 102 115818 - 115803 - g 71 -7.6 -3.84451 | opp_overlap 115803 115802 TCTTGGAAATCCAAA TCTTGC TGCA GCAAGA CTTTTTATAGAAGGG TERM 103 116893 - 116881 - g 76 -3.3 -5.2189 | TTAATGACTAAAAAA GCTTC CAT GGAGC CTGAGAGTTTGAATT CF0099 115498 - 117738 + | hypothetical protein CF0100 117747 - 118913 + | hypothetical protein omp03 119944 - 118910 - | outer membrane protein ompB gpsA 121081 - 120077 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase uap 122460 - 121078 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 104 121366 - 121384 + g 76 -2.4 -5.40072 | opp_overlap 121362 121367, overlap 121367 TAGATCAAAAATAAA TTCTTCGA ATT TCCAAGAG TTTTTTTCAGAGGAA TERM 105 121938 - 121912 - G 79 -3.1 -5.40474 | gap 1, overlap 121913 AGGCTGGCAAAAAAA GTCCA-CTTGAT TGGG ATCAAGATGGAA ATAATCGTTGGATTC CF0104 122839 - 122480 - | hypothetical protein fliI2 124136 - 122832 - | type III secretion system ATPase fliH 124678 - 124133 - | type III secretory flagellar biosynthesis fliF2 125721 - 124708 - | type III secretion system protein TERM 106 125673 - 125698 + g 70 -2.5 -5.055 | opp_overlap 125679 CCAAAAGGCCTAAAG GAGAGATGCCT AACG AAGCAACTTTC TTTTTTAGGAATTGA nifU 126644 - 125823 - | NifU-related protein TERM 107 125997 - 125959 - G 71 -4.1 -4.95155 | gap 1, opp_overlap 125971, overlap 125968 125971 CCTATAGCAGAAAAA CATCCAGAACAATTTCCT GCAT AGGAAATTGTTAC-AATG TTTTCTTCAAGACTT TERM 108 125989 - 125968 - G 79 -10.3 -3.48994 | opp_overlap 125971, overlap 125959 125971 GAAAAACATCCAGAA CAATTTCCT GCAT AGGAAATTG TTACAATGTTTTCTT TERM 109 126119 - 126109 - G 70 -5.4 -4.33928 | opp_overlap 126109, overlap 126111 GATTCCAAAGATAAA GCTT CCC AAGC TTCTTGAGTATAAGG nifS1 127798 - 126641 - | cysteine desulfurase pgmA 128436 - 127753 - | phosphoglyceromutase rsuB 128571 - 129290 + | ribosomal large subunit pseudouridine synthase B TERM 110 129560 - 129570 + G 82 -4 -5.40072 | opp_overlap 129560 TCAGCATCATAAGAT TTCT TGG AGAA TTTTTTTAAAACACA CF0112 129333 - 129860 + | hypothetical protein birA 130406 - 129828 - | biotin--protein ligase rodA 130443 - 131582 + | cell division related rod shape-determining membrane protein zntA 133558 - 131585 - | cadmium/zinc cation transporting ATPase CF0116 134317 - 133574 - | hypothetical protein TERM 111 133961 - 133979 + g 70 -3.1 -4.91194 | opp_overlap 133947, overlap 133947 GGCTTTGAGTTCTAA GCGTTCT TGCTC AGGATGC TTTTCTATTTCTTCT TERM 112 134142 - 134096 - G 82 -11.1 -3.52539 | TAATCCTAATGAGAA TAGCATTTCTGCTTGCGATCC ATGAG AAATCGGAAGAAGAAATGCTA GGGTCCTGATGAAAA serS 135660 - 134380 - | seryl-tRNA synthetase ribD 135704 - 136837 + | riboflavin biosynthesis protein TERM 113 137287 - 137301 + G 72 -3.5 -5.03715 | CAGCCCTGAGGATTT TGTCC GTCCG GGGCA TTTTTTCCCCCTAGT ribA 136895 - 138154 + | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein ribH 138167 - 138631 + | riboflavin synthase subunit beta TERM 114 138662 - 138639 - T 75 -9.6 -2.66435 | opp_overlap 138632, overlap 138636 AGTTGTAGTAGAGTA GCGTTGCACT TTAT AGTGTAACGC TCACAGAACCATTTA CF0121 140016 - 138649 - | hypothetical protein TERM 115 140233 - 140248 + H 72 -4.8 -4.74084 | overlap 140237 TTTTAATGCATTTGT GTTATA ATAG TATAAC TTTTAATTTTAATTT TERM 116 140326 - 140352 + G 87 -12.4 -3.35679 | TCTGATATTGCTCTT GAGTTTGAGTAG TTG CTGCTCGAACTC TTATGGATCAAAGCA TERM 117 140660 - 140672 + G 71 -6.3 -4.18494 | GAACTTCATCCCCTA GCTTT ATT AAAGC TTTTAGCTGAGAATC ebp02 140276 - 140920 + | hypothetical protein TERM 118 140966 - 140936 - f 90 -12 -3.44146 | overlap 140961 GCTCTCTATAACGAA GCTTCCTTTCCC CTAATCC AGGAAAGGAAGC CACGAGCTAATTTTC dagA1 141027 - 142403 + | D-alanine/glycine permease CF0124 142417 - 142869 + | hypothetical protein set 143533 - 142874 - | SET domain-containing protein phnP1 144318 - 143530 - | beta-lactamase superfamily metal dependent hydrolase ftsK 146740 - 144323 - | cell division related stage III sporulation protein E TERM 119 145064 - 145086 + g 70 -5.6 -4.41348 | opp_overlap 145070, overlap 145066 145078 GAGCCCCAGGAATCT TAGAATTTCG TAA CGAAGTTCCA TTTCTTTAACAAGCC TERM 120 145930 - 145943 + g 74 -5.3 -4.73635 | CTAGAAAAAGAGTCG CTCTT TCTG AAGAG TTTTGTTGGGTTATA TERM 121 146261 - 146234 - G 70 -3.4 -4.95484 | CAGTATGAAAGAAAA GATCAGGCCTGT GCCC ACAGAACCAATC AAATGCTTTAAACAG TERM 122 146317 - 146307 - G 76 -3.2 -5.23765 | TAAAGAATATAAAAA GGAA TTC CTCC TAAATAAGAAACTGG TERM 123 146956 - 146938 - R 72 -4.7 -4.6821 | opp_overlap 146938 AATCTTAAGAGAAAA TATTATC TCGAT GATAATA TTTATCCAAGACAAA CF0128 147493 - 147212 - | hypothetical protein TERM 124 147398 - 147380 - G 83 -7.6 -4.8277 | AAACAGAAAAAAGAA GAATTTTT CAA AAAAATTC AAAAGAGATTTTTCT TERM 125 147663 - 147679 + H 70 -7.3 -3.82528 | overlap 147668 TAAAAAATGCTTGTT CGGGTTT TTA AAATCCG TTAGTTTTTAAAATT TERM 126 147668 - 147692 + H 77 -3 -5.49579 | overlap 147663 AATGCTTGTTCGGGT TTTTAAAATC CGTTA GTTTTTAAAA TTTTATTTTTTCTGA TERM 127 149236 - 149217 - H 72 -9.2 -2.65808 | opp_overlap 149232, overlap 149213 149214 AGTCGTAACAAGGTA GCCCTACC GGAA GGTGGGGC TGGATCACCTCCTTT TERM 128 150011 - 149999 - H 78 -7.7 -4.2354 | GAAAGGTGAAAAGAA CCCTT GTT AAGGG AGTGAAATAGAACCT TERM 129 152573 - 152558 - H 70 -4.6 -4.78149 | GTGATAATGGAAAAA GGGACA CACC TGACCC CATTCCGAACTCAGA TERM 130 152710 - 152691 - H 77 -9.4 -3.30243 | opp_overlap 152691 ACTGAGTTTTTATAA GGAGAATA GAAA TATTCTCC TTTTTTTTTGTCTCT TERM 131 152691 - 152710 + H 100 -9.4 -6.32216 | opp_overlap 152691 ACTGAGTTTTTATAA GGAGAATA GAAA TATTCTCC TTTTTTTTTGTCTCT TERM 132 152747 - 152789 + H 89 -6.5 -5.63504 | opp_overlap 152747 TTGTTGTTTTTTAAA TACATCTTTTCACTTAGCA AAAAA TTTTAGGTGCAAAGATGTA TTTTTTTCTCAAGTT TERM 133 153420 - 153432 + G 88 -4.1 -5.75342 | ATAATGATGGAGAAT GGAGA TCT TCTTC TTTTTTTTGCAGAAA TERM 134 154810 - 154834 + G 93 -13 -3.37499 | GGTGTTTAGTTTTCT CGCCATGATA ATATA TATCATGGCG TTAATTCGAATGTTG CF0129 152984 - 154870 + | hypothetical protein nqrF 156180 - 154885 - | Na(+)-translocating NADH-quinone reductase subunit F TERM 135 155134 - 155161 + g 71 -9.4 -2.80779 | opp_overlap 155138, overlap 155132 155138 155142 CACTAAATGGTAGTG GAAATTAGGAAA ATCC TTTTCTAATTTC TCGTATTCCTCTTGA TERM 136 155425 - 155403 - G 70 -9.2 -3.15407 | opp_overlap 155404, overlap 155392 155393 155401 TATAGGAGGAACAGA CTCCCCAA GGGATAT TTGGGGAG GGAGCATTATTAATA TERM 137 155865 - 155915 + g 93 -9.9 -4.74504 | gap 1, opp_overlap 155873 155875 GTTCTAGCTGCCTCT TAGAAAAAGTCGCACGATCTGTCT CTAG AGGCTGATC-TGCGCCTTTTACTA TTTTTACCTTGCACT yajC 156652 - 156299 - | preprotein translocase subunit YajC TERM 138 156549 - 156529 - G 74 -4.7 -4.99312 | overlap 156531 AATAGAAGAACAAAA TAGCAATGC CTA GCATTACTG CAGGTTGAGCAAAAG TERM 139 156547 - 156531 - G 73 -7.3 -4.08992 | overlap 156529 TAGAAGAACAAAATA GCAATGC CTA GCATTAC TGCAGGTTGAGCAAA rrm1 157928 - 156723 - | tRNA/rRNA methyltransferase TERM 140 158127 - 158098 - R 93 -8.1 -5.61913 | gap 1 AAGAAAGAGAAAAAA GAGGGCAAGTTATA AAA TATAA-TTACCCTC TAAAAAACCAAGACA hctA 158532 - 158152 - | histone H1-like protein Hc1 CF0134 158932 - 158684 - | hypothetical protein TERM 141 159183 - 159161 - g 100 -16.4 -3.60234 | opp_overlap 159161 CTAGAGATTGGGAAA CTGTCGCGTT ATT AACGCGACAG TATGTCCAGGTCAGA TERM 142 159161 - 159183 + G 100 -16.4 -2.88544 | opp_overlap 159161 CTAGAGATTGGGAAA CTGTCGCGTT ATT AACGCGACAG TATGTCCAGGTCAGA CF0135 158938 - 161445 + | hypothetical protein hemY 162684 - 161416 - | protoporphyrinogen oxidase TERM 143 162030 - 162013 - G 70 -5.6 -4.34947 | opp_overlap 162013, overlap 162004 162007 AACAGAGGAGGAAAA CTTCCA TGTTGC TGGAAG TTTTTTTACTAGAGT TERM 144 162013 - 162030 + g 93 -5.6 -5.52986 | opp_overlap 162004 162007 162013 AACAGAGGAGGAAAA CTTCCA TGTTGC TGGAAG TTTTTTTACTAGAGT TERM 145 162225 - 162182 - G 76 -8.9 -3.67588 | GAAAGGGTAGGGAAA GCCATATGTGCAGAAAGTA CATCGC TACGTCCTGCACGAATGGC CGTAACAATAGGATT hemN1 164057 - 162681 - | coproporphyrinogen III oxidase TERM 146 162999 - 163009 + gr 70 -5.4 -4.371 | opp_overlap 162999 AATAGTGGCTAGAGA TCCT GAA AGGA TTTTCGTATGGTAAG TERM 147 163952 - 163942 - GR 71 -6.8 -4.09739 | TGAAGGCGTTCAAAA GCGT GAT ACGC AGGAGCTGCATTGGA hemE 165031 - 164030 - | uroporphyrinogen decarboxylase mfd 168295 - 165041 - | transcription-repair coupling factor TERM 148 166714 - 166724 + gr 71 -6.8 -4.13282 | AACGCTGAGCTTCGA GCTG AAG CAGC TTTTCAGCGTATAAT TERM 149 167023 - 167041 + gr 76 -4.6 -5.1523 | CTTCCTCAGTAGTTA CAGAAAAA TAA TTTCTCTG TTTTTGTCTTCTCAG alaS 170892 - 168265 - | alanyl-tRNA synthetase TERM 150 168651 - 168665 + gH 72 -4.3 -4.78981 | AATGGATAAGTTTCG TCTCT AGTTC AGAGA TTTGTTTTGCTTGCT TERM 151 170570 - 170547 - GH 71 -3 -5.1166 | overlap 170548 170551 GATCAAAATTAAAAA CTGACAGGGA AACT TCCCAGGCAA AAGCAATCGCTTGTT tkt 171152 - 173149 + | transketolase amn 174018 - 173143 - | AMP nucleosidase efp2 174224 - 174796 + | elongation factor P CF0144 174854 - 175075 + | hypothetical protein pph2 176006 - 175125 - | phosphohydrolase groL2 177945 - 176419 - | heat shock protein HSP60 subunit murF 178327 - 179673 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 152 179718 - 179730 + G 82 -6.3 -4.9218 | TTTTCTTATCTTAAT GAATC TTT GATTC TTTTTCTGGTAACTG TERM 153 180202 - 180214 + G 75 -2.7 -5.27938 | GATCTTCTATTTTAG CAAAG CTT TTTTG TTTTTCTTTGGCAAT TERM 154 180573 - 180555 - g 75 -9.6 -3.28712 | GTGTTCGTTGCAGAA GCAGGATC TGT AATCCTGC AAGTTGCTAGTTGCC mraY 179691 - 180737 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 155 180799 - 180789 - g 70 -5.4 -4.34402 | opp_overlap 180789 180784 GGTGTTACAGGAAAA TCTG CAG CAGA GTTTCTTCATAAAAA murD 180741 - 182000 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 156 182505 - 182473 - g 70 -8.5 -3.28119 | overlap 182476 ACTTATGCAGATCAA TGACCTATCTTCCAC TCA GTTAAAGATAGGGCA AATATTGAGAGTTCC nlpD 181997 - 182725 + | cell wall binding muramidase TERM 157 183227 - 183237 + GF 70 -3.2 -4.90266 | GACAATGGGTCTGCA GCTG TAA TAGC TTTTTCATTAATCCC ftsW 182744 - 183898 + | cell division related rod shape-determining membrane protein TERM 158 184089 - 184106 + GF 71 -7.7 -3.56821 | CTTATTGCTTTTGGT CCCGATG TGGT CATTGGG TTTGGGAGCTATCAT murG 183810 - 184883 + | N-acetylglucosaminyl transferase mudD 184891 - 187326 + | MurC/ddl bifunctional enzyme TERM 159 187322 - 187350 + T 87 -12.6 -3.04799 | opp_overlap 187313 187322, overlap 187330 CATTAATCGCGAAGA GCTAAAAACTCC GCAAA GGGGTTTTTAGC TATTGCCAAATTCTG TERM 160 187350 - 187322 - T 80 -10.4 -3.06737 | opp_overlap 187322 187330, overlap 187313 CATTAATCGCGAAGA GCTAAAAACTCC GCAAA GGGGTTTTTAGC TATTGCCAAATTCTG nab1 187822 - 187394 - | nucleic acid binding protein cutA 188263 - 187931 - | periplasmic divalent cation tolerance protein CutA1 CF0156 189048 - 188260 - | hypothetical protein TERM 161 188328 - 188353 + g 72 -9.8 -3.05471 | opp_overlap 188328, overlap 188325 188321 TTTGCTGAGAGTCAA TCACTGTGCT ATTTTG AGCACGGTGA TAATTCTTTAGTCCT TERM 162 189190 - 189212 + G 79 -4.9 -5.08824 | GGGGCCCTGGATGCT GTTTCTGTT CCCCA AGCAGAAGC TTTTTTAGATAAGAA rsbV2 189124 - 189456 + | anti-sigma F factor antagonist miaA 189468 - 190496 + | tRNA delta(2)-isopentenylpyrophosphate transferase oxr4 191548 - 190487 - | hypothetical protein mhcA1 191637 - 193301 + | myosin heavy chain CF0161 193298 - 193936 + | hypothetical protein ybeB 193995 - 194354 + | chloroplast development gene iojap superfamily protein TERM 163 194398 - 194384 - g 78 -2.8 -5.5112 | TTTATGAATAAAAAA CGTG TAGTAGT CACG GGATTGGGAGTAGTT fabF 194372 - 195622 + | 3-oxoacyl-(acyl carrier protein) synthase II mutT 195625 - 196074 + | NTP pyrophosphohydrolase including oxidative damage repair enzymes TERM 164 196111 - 196084 - T 87 -11.4 -3.18268 | opp_overlap 196089, overlap 196089 CGCTAAGTAAAAGGA TAAAAGGAGAGG GGAA CCTCTCCTTTTC TTAAGCCTTTATTGT TERM 165 196106 - 196089 - T 100 -11.3 -4.68539 | opp_overlap 196089, overlap 196084 AGTAAAAGGATAAAA GGAGAGG GGAA CCTCTCC TTTTCTTAAGCCTTT TERM 166 196089 - 196106 + T 100 -11.3 -4.6635 | opp_overlap 196089 196084 AGTAAAAGGATAAAA GGAGAGG GGAA CCTCTCC TTTTCTTAAGCCTTT ppa 196758 - 196120 - | inorganic pyrophosphatase TERM 167 197369 - 197386 + G 79 -5.5 -4.87665 | opp_overlap 197371, overlap 197371 GGTGATCCTTCAATT TACACCG CGCA CGGTGTC TTTTTATGCATAAAA TERM 168 197371 - 197384 + G 75 -8.1 -4.06182 | opp_overlap 197371, overlap 197369 TGATCCTTCAATTTA CACCG CGCA CGGTG TCTTTTTATGCATAA TERM 169 197735 - 197722 - g 80 -8.1 -4.44915 | opp_overlap 197721 TAACCAGTTAGAAAA CGCCT CTTT AGGCG CTGTGCTGCAAGCTC gdhA 196922 - 197971 + | glutamate/leucine dehydrogenase cysQ 198948 - 197968 - | sulfite synthesis/inositol-1-monophosphatase TERM 170 198075 - 198093 + g 74 -9 -3.51137 | CTAAAATTATGGGGT GATTTTCT AAT AGAAAATC TTCTCTGCGGTAATT TERM 171 198175 - 198163 - G 70 -3.3 -4.8622 | opp_overlap 198168 198173, overlap 198164 TTCCTCAACTAAAAA GGCTC CAG GAGCA TGATCCCAAGCTTTT TERM 172 199321 - 199347 + G 70 -8.7 -3.28712 | opp_overlap 199320 GATGGTTCTTAAATT CTGTTGGAGCG ATACC CGTGCCAACAG TTATCCCCGGAAGAG sga 199056 - 199817 + | sn-glycerol-3-p acyltransferase TERM 173 200720 - 200744 + G 73 -8.5 -3.75738 | overlap 200721 AAAAAACAGGGGTCT TCGCTAAGCTC CTT GCGCTTGGCGG TTATTGGTGGTGATG TERM 174 200721 - 200743 + G 71 -9.8 -2.84961 | overlap 200720 AAAAACAGGGGTCTT CGCTAAGCTC CTT GCGCTTGGCG GTTATTGGTGGTGAT TERM 175 201166 - 201185 + G 77 -10.8 -2.75229 | overlap 201170 CGAAATGATTAGTCT GCAAGCTT TAGA AAGCTTGC TCATTGAAGGTTTTG aas 199832 - 201454 + | long chain fatty acid--[acyl-carrier-protein] ligase priA 204792 - 202543 - | primosome assembly protein PriA bioF1 201505 - 202611 + | 8-amino-7-oxononanoate synthase TERM 176 202616 - 202627 + gT 80 -4.4 -5.27335 | opp_overlap 202616 TTTGCCGATAACAAA GCTT CATG AAGC TTTTTATTTACCGGA TERM 177 202900 - 202886 - GT 73 -4.2 -4.91109 | opp_overlap 202887 202897, overlap 202887 202895 TCTTGATTATAAAAA GCAGGA TAA TCCTGT TGCATGGCACAACGG TERM 178 202899 - 202887 - GT 71 -7.7 -3.54183 | opp_overlap 202887 202897, overlap 202886 202895 CTTGATTATAAAAAG CAGGA TAA TCCTG TTGCATGGCACAACG CF0172 205457 - 204744 - | hypothetical protein dsbD1 205630 - 206139 + | thioredoxin/thiol-disulfide isomerase TERM 179 206154 - 206192 + F 100 -17 -5.18643 | opp_overlap 206156 206159, overlap 206148 206144 206156 GCAAATCTCTTCTTA AAGAACTTTAGAGAGGAG GTC TTCCTCTCTAAAGTTCTC TTTTCTTTTAATTAA TERM 180 206156 - 206190 + F 100 -19.6 -4.20163 | opp_overlap 206156 206159, overlap 206148 206144 206154 AAATCTCTTCTTAAA GAACTTTAGAGAGGAG GTC TTCCTCTCTAAAGTTC TCTTTTCTTTTAATT TERM 181 206190 - 206156 - f 100 -18.9 -3.5394 | opp_overlap 206148 206144 206156 206154, overlap 206159 AAATCTCTTCTTAAA GAACTTTAGAGAGGA GGTCT TCCTCTCTAAAGTTC TCTTTTCTTTTAATT TERM 182 206187 - 206159 - f 100 -14.8 -3.90744 | opp_overlap 206144 206156 206154, overlap 206156 TCTCTTCTTAAAGAA CTTTAGAGAGGA GGTCT TCCTCTCTAAAG TTCTCTTTTCTTTTA lysS 206366 - 207946 + | lysyl-tRNA synthetase cysS 209373 - 207943 - | cysteinyl-tRNA synthetase TERM 183 207987 - 208006 + g 81 -12.2 -2.62983 | TGGAATCCTCGATCA GGTAGCCT AAAG AGGCTACC TGATCTCGAAATGCA CF0176 209741 - 209580 - | hypothetical protein rnpA 211209 - 210790 - | ribonuclease P dsbD2 209802 - 210848 + | thioredoxin/thiol-disulfide isomerase rpmH 211360 - 211223 - | 50S ribosomal protein L34 TERM 184 211678 - 211696 + G 70 -8.2 -3.71848 | GATAAGCTTGTTCGT CGTAAAGG GCG CCTTTATG TTATTAATAAAAAGG rpmJ 211621 - 211758 + | 50S ribosomal protein L36 rpsN 211784 - 212089 + | 30S ribosomal protein S14 TERM 185 212124 - 212173 + T 85 -9.5 -4.00124 | overlap 212127 212138 ACCTACTCTTGGTAA TGCGGCGTTAAAGGTTTTTAAGT GTTT ACTTAAGAGTTTTTAGCGCCTCG TTTAGTTCTGGGATG TERM 186 212127 - 212170 + T 85 -12 -3.04864 | overlap 212124 212138 TACTCTTGGTAATGC GGCGTTAAAGGTTTTTAAGT GTTT ACTTAAGAGTTTTTAGCGCC TCGTTTAGTTCTGGG CF0182 212658 - 212149 - | hypothetical protein TERM 187 212417 - 212400 - G 79 -8.5 -4.0825 | opp_overlap 212402 GGGGGAACGAAATAA CAGAAGA GTCT TCTTCTG ACAGAGAGTGAAAAA ebp03 212749 - 213237 + | hypothetical protein uvrC 215060 - 213246 - | excinuclease ABC subunit C TERM 188 214919 - 214896 - G 83 -7.5 -4.72272 | opp_overlap 214896 TTTTTTCATTAAAAA GGGAATTCT TTCTCT AGAATCCCC CTGTTTCTGAAAATA mutS 217543 - 215063 - | DNA mismatch repair protein TERM 189 215743 - 215757 + g 71 -7.2 -3.85817 | TGGGGATAAAAGTTC CTCTAT CTA ATAGAG TTTGTGCAACAGGAT TERM 190 217483 - 217471 - G 73 -7.7 -3.82946 | opp_overlap 217468 CCATGCGAAAGAGAA GGAGA GAC TCTCC GGCTTGCTCCTTACA TERM 191 219038 - 219026 - g 87 -4.8 -5.4387 | opp_overlap 219026 ACACAAATTAAAAAA TGGG GGAAT CCCA TTGTTGTGTACGAAC TERM 192 219445 - 219462 + G 72 -8.5 -3.54459 | TACTGATTGTCTGGA GACTGTA TTTA TACAGTC TTTACAAAAGCTTGC dnaG 217847 - 219637 + | DNA primase TERM 193 219863 - 219877 + G 73 -7.8 -3.8165 | GCTATGGGATTAGCT GCCGCA CGT TGTGGC TCTTCTTTTGTTGAA CF0187 219746 - 220015 + | hypothetical protein CF0188 220176 - 220670 + | hypothetical protein CF0189 220891 - 221406 + | hypothetical protein CF0190 221522 - 221968 + | hypothetical protein glyQ 225072 - 222049 - | glycyl tRNA synthetase TERM 194 223233 - 223243 + g 77 -8.2 -4.18018 | ACTTGTTGGTGATCT CGCC AGA GGCG TTTTGCGTGGGGAAG pgsA2 225342 - 225968 + | CDP-diacylglycerol/glycerol-3-P phosphatydyltransferase glgA 227377 - 225950 - | glycogen synthase TERM 195 226529 - 226541 + g 74 -4.1 -5.08731 | CCCTAATTTTTCATA CAAGG CTA CTTTG TTTTCTTCTTTCTTC TERM 196 226688 - 226672 - G 82 -8 -4.62904 | opp_overlap 226671 226674 AAATACCTCTAAAAA CATGGC GTCTA GCCATG ATAGCGTCATGCATT rpl25 227867 - 228424 + | 50S ribosomal protein L25/general stress protein Ctc pth 228432 - 228983 + | peptidyl-tRNA hydrolase rpsF 229060 - 229398 + | 30S ribosomal protein S6 rpsR 229416 - 229664 + | 30S ribosomal protein S18 rplI 229685 - 230206 + | 50S ribosomal protein L9 TERM 197 230221 - 230233 + F 74 -9.1 -3.12351 | opp_overlap 230210 GACATCCTTGGGTGA GGAGC TTT GCTCC TTGCCTATACAACAA TERM 198 230334 - 230312 - g 80 -6.3 -4.66163 | overlap 230314 AGCTTCACGGAAAAA CTTCTCATG GTTTT CATGAGATG ACCACTCAGTATCAA TERM 199 230541 - 230569 + G 79 -8.7 -4.13654 | opp_overlap 230556 230557, overlap 230542 CGGAGCTGGTGTGGG AGGCGGTAGCAGC AAC GCTGCAACAGCCC TTTATGCTTTAAACG TERM 200 230542 - 230568 + G 82 -12.2 -3.0771 | opp_overlap 230556 230557, overlap 230541 GGAGCTGGTGTGGGA GGCGGTAGCAGC AAC GCTGCAACAGCC CTTTATGCTTTAAAC ispE 230257 - 231129 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase CF0200 231336 - 231109 - | hypothetical protein TERM 201 231762 - 231803 + G 71 -7.5 -3.96216 | gap 1, overlap 231763 GGCGGCTCCTCTATT TTTATGGTTTCTCTAT-TCC GAG GGATATAGAGTGACCATGAG TTATTTCAATAGCAG TERM 202 231936 - 231920 - g 72 -4.4 -4.6856 | overlap 231895 231922 231930 CAAATATTGCAAAAA TAGGGA AACAG TCCCCA CGATGCTGGTGGTGG CF0201 231532 - 232884 + | hypothetical protein ide1 233770 - 232892 - | insulinase family metalloproteinase ide2 235708 - 233936 - | insulinase family metalloproteinase TERM 203 234854 - 234872 + g 70 -9.6 -2.51725 | overlap 234853 234850 GTAGATTTGTATACT TGCTGTGG GTT CTACAGCA GTGTTAATATAAAGT TERM 204 235456 - 235488 + g 100 -12.1 -4.77036 | opp_overlap 235463 TTAAGTGTGCTAGTC CAGGAAATTCCTGAG GAT CTGAGGAATTCCCTG TTTTTACTGCTAAAG plsB 236712 - 235711 - | glycerol-3-P acyltransferase TERM 205 235876 - 235854 - G 70 -2.8 -5.08483 | gap 1, opp_overlap 235854, overlap 235849 CAAAACTAAAGAAAA TCGGAGCAA AGAAAA TTGCTC-GA TATTCCCCAATAGTA TERM 206 236536 - 236522 - G 88 -8.6 -4.82128 | opp_overlap 236522 GGAGGAAAGATAAAA GGATCT TTA AGATCC TCTATGATAATTTTC cafE 238247 - 236715 - | ribonuclease G/E TERM 207 239008 - 238987 - g 82 -8.1 -4.55383 | gap 1, opp_overlap 238987 238992, overlap 238992 238999 AAGGTAGAAAAAGAA TCAAA-GGGG AAA CCCCTTTTGA TAAGTTATAAAAGGT TERM 208 238987 - 239008 + G 70 -9.5 -2.5955 | opp_overlap 238987 238992 238999, overlap 238992 AAGGTAGAAAAAGAA TCAAAGGGG AAAC CCCTTTTGA TAAGTTATAAAAGGT TERM 209 239002 - 238992 - g 77 -8.2 -4.2711 | opp_overlap 238987 238992, overlap 238987 238999 AGAAAAAGAATCAAA GGGG AAA CCCC TTTTGATAAGTTATA TERM 210 238992 - 239002 + G 80 -8.2 -4.32049 | opp_overlap 238992 238987 238999, overlap 238987 AGAAAAAGAATCAAA GGGG AAA CCCC TTTTGATAAGTTATA CF0206 238557 - 239018 + | hypothetical protein TERM 211 239113 - 239100 - g 76 -4.5 -5.06451 | gap 1, opp_overlap 239100 CACGATGCGAAAAAA GCGCGC CAT GCG-GC TGTCTGCAACAATTG rpmF 239031 - 239213 + | 50S ribosomal protein L32 TERM 212 239254 - 239283 + G 79 -10.1 -3.56092 | overlap 239257 AAATTGGCATAGATC TAATGGGAGGGGA TCAC TCTCCTCTCGTTA TTTGGGAAGTGCTGA TERM 213 239257 - 239280 + G 71 -7.4 -3.91716 | overlap 239254 TTGGCATAGATCTAA TGGGAGGGGA TCAC TCTCCTCTCG TTATTTGGGAAGTGC plsX 239229 - 240179 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 214 240510 - 240498 - g 80 -6.3 -4.7064 | overlap 240500 AAGAAAAAAGAGAAA TCTTC TGA GAAGA AAAATCCTAAAAAAG TERM 215 243608 - 243590 - g 73 -9.6 -3.14132 | TTCGTTTGTTACTAA CGATGATG GCT CATCACCG TTACCACCACAAATT pmp01 240285 - 244895 + | polymorphic outer membrane protein D TERM 216 244949 - 244925 - T 89 -8.6 -4.3208 | opp_overlap 244905 244903 244926, overlap 244926 TTCGAGAATCGAAAA GGCGTTGTGT TGTTT ACACAACGCT TTTTTTAGATAGAAG TERM 217 244948 - 244926 - T 89 -12.1 -3.18766 | opp_overlap 244905 244903 244926, overlap 244925 TCGAGAATCGAAAAG GCGTTGTGT TGTTT ACACAACGC TTTTTTTAGATAGAA TERM 218 244926 - 244948 + T 100 -12.1 -5.47218 | opp_overlap 244925 244926, overlap 244905 244903 TCGAGAATCGAAAAG GCGTTGTGT TGTTT ACACAACGC TTTTTTTAGATAGAA CF0210 246269 - 244971 - | hypothetical protein TERM 219 245888 - 245908 + g 72 -3.4 -5.09426 | overlap 245889 TCTGAAGAATCTCGC TTTTTGTT TTTTC AACAAAAG TTTTTTGGAGTTCGG TERM 220 246598 - 246563 - g 93 -8.4 -5.24129 | CCCTGGGACAAAAAA CTAAAGCGACATAACC TTGA AGTTATGAGGCTTTAG AGATGTAGGAGATTC CF0211 246446 - 246598 + | hypothetical protein CF0212 248598 - 246637 - | hypothetical protein TERM 221 247876 - 247888 + g 75 -5.5 -4.70659 | TTCTTTCCCCTCCAG GTCTG GAT CGGAC TTTTTCACTATCACA CF0213 249687 - 248698 - | hypothetical protein CF0214 250966 - 249707 - | hypothetical protein TERM 222 250193 - 250213 + g 71 -6.1 -4.28115 | opp_overlap 250193, overlap 250190 CTGTACACAAAATAG GACATGGTT GAT ACCCGTGTC TTGTTTGTTATAGAT TERM 223 250874 - 250893 + g 75 -5.7 -4.66535 | ATGATACCGAATGCT CTCTGCA TATGTC TGCAGGG TTTGTTTTAAAGATT TERM 224 251284 - 251294 + H 93 -8.2 -5.54894 | opp_overlap 251284 251283 AGTCGTTCTAAAAAT GGCC TCG GGCC TTTTTTTAATAAATT TERM 225 251294 - 251284 - H 72 -8.2 -3.33922 | opp_overlap 251284, overlap 251283 AGTCGTTCTAAAAAT GGCC TCG GGCC TTTTTTTAATAAATT TERM 226 251938 - 251920 - g 88 -8.9 -4.62302 | opp_overlap 251922 GAATATTCTCAAAAA GATCCTG CTTAT CAGGATC TTGAGGATAAATTGG TERM 227 252416 - 252387 - g 79 -10.1 -3.60884 | overlap 252379 TTTAAAAGAGGAGAA GTCTCATCCACCT TGTG ATATGGATGAGAC TAGGGTAACGGCTGA CF0215 251506 - 252609 + | hypothetical protein CF0216 252823 - 253941 + | hypothetical protein mhcB1 254123 - 256693 + | myosin heavy chain form B TERM 228 256709 - 256745 + F 74 -6.7 -4.3587 | opp_overlap 256714, overlap 256710 ATTTTCTTATTTTGA TTAAAGATCCTCCTT ATGTTTC ATGGGGGATCTTTAG TTTCTATTATTCATA TERM 229 256710 - 256744 + F 70 -8 -3.20437 | opp_overlap 256714, overlap 256709 TTTTCTTATTTTGAT TAAAGATCCTCCTT ATGTTTC ATGGGGGATCTTTA GTTTCTATTATTCAT TERM 230 257757 - 257745 - g 80 -6.3 -4.66625 | ATAGAGAGAAATAAA GAACT CAA AGTTC AGAAAGCAGCGCTTG mhcB2 257034 - 258179 + | myosin heavy chain form B TERM 231 258252 - 258284 + F 100 -10 -4.46615 | overlap 258255 258257 TTAATATTATAAGTT CTATTGACCCTATT GAGTA AATAGGGTCGATTG TTTTCATTACTACTC TERM 232 258255 - 258281 + F 100 -10.3 -4.34008 | overlap 258252 258257 ATATTATAAGTTCTA TTGACCCTATT GAGTA AATAGGGTCGA TTGTTTTCATTACTA TERM 233 258257 - 258279 + F 80 -10.7 -2.50508 | overlap 258255 258252 ATTATAAGTTCTATT GACCCTATT GAGTA AATAGGGTC GATTGTTTTCATTAC CF0219 258821 - 259543 + | hypothetical protein TERM 234 259562 - 259598 + F 81 -7.5 -4.38322 | gap 1, opp_overlap 259567, overlap 259567 GCAACATAAAGATGT TAAAACAGGCTTCTCA CCATTA TGAGA-GCCTGTTTTC TTGTTTTATAATTGA TERM 235 259567 - 259593 + F 88 -7.4 -5.12916 | gap 1, opp_overlap 259567, overlap 259562 ATAAAGATGTTAAAA CAGGCTTCTCA CCATTA TGAGA-GCCTG TTTTCTTGTTTTATA TERM 236 259593 - 259567 - f 81 -8.1 -4.2243 | gap 1, opp_overlap 259567 259562 ATAAAGATGTTAAAA CAGGCTTCTCAC CATT ATGAG-AGCCTG TTTTCTTGTTTTATA TERM 237 260347 - 260331 - g 87 -12.3 -3.36581 | TAAACTTCGAACTAA CGTGGAG CTA CTCCACG CAGAATCTATAATAG mhcA3 259747 - 260808 + | myosin heavy chain-like protein lpxB 262720 - 260843 - | lipid-A-disaccharide synthase TERM 238 261886 - 261857 - G 81 -2.9 -5.63857 | overlap 261860 AAAAATCGAAAAAAA GACTTCCAAAAAT CCTG ATACTTGGAACTC TTCCATGTGAATGAG TERM 239 262214 - 262188 - G 80 -8.1 -4.45517 | opp_overlap 262179, overlap 262179 AAACCACCGATAAAA CTTACCAGC CAAAATAAC GCTGGTAAG GTAGAGCGGTTATTT pcnB2 264017 - 262734 - | Poly (A) polymerase CF0223 264262 - 264471 + | hypothetical protein mrsA1 264659 - 266035 + | phosphoglucomutase/phosphomannomutase glmS 266044 - 267873 + | D-fructose-6-phosphate amidotransferase TERM 240 268656 - 268676 + G 75 -5.4 -4.77165 | TTGGGAAGGTTTAGT TCTAGGGG TAGTT CCCTTGGA TTTTCTTATGAAAGC tyrP 267946 - 269133 + | tyrosine transport yccA 269189 - 269905 + | transport permease ftsY 270777 - 269920 - | cell division related signal recognition particle GTPase sucC 270848 - 272014 + | succinyl-CoA synthetase subunit beta sucD 272023 - 272898 + | succinyl-CoA synthetase subunit alpha htrA 273236 - 274702 + | DO serine protease TERM 241 274717 - 274704 - T 71 -5.3 -4.54323 | AACCAGAAGAATAAA CTGAA ATTT TTCAG CAGGTTTATCTTATA TERM 242 274736 - 274754 + T 100 -11.8 -5.77632 | opp_overlap 274736 GTTTATCTTATAAAA GCACTCTT TTC AAGAGTGC TTTTTTTATGCTTTT TERM 243 274754 - 274736 - T 100 -11.8 -4.4009 | opp_overlap 274736 GTTTATCTTATAAAA GCACTCTT TTC AAGAGTGC TTTTTTTATGCTTTT dapE 276124 - 274760 - | N-succinyl-diaminopimelate deacylase TERM 244 275030 - 275014 - G 71 -9.5 -2.75268 | overlap 275013 275022 275023 GAACCACGGGTAAAT TTGGAGA ACT TCTCCAA CCCGGAGAGCCGTCA TERM 245 276458 - 276468 + G 71 -6.8 -4.10657 | TCAAACTTCTAACGG CGTG GCT CACG TTTTAGAGCATATGG TERM 246 276852 - 276870 + G 71 -7.4 -3.90286 | GGAGTGAATTCTGGA GGAGATCC TAA GGATATCC TTTCGCTTTCTCATG TERM 247 276923 - 276935 + G 85 -5.5 -5.26119 | GAGCCAATATACTTT TGGGC GTT GCCTA TTTTATTTTTACGGA ide3 276273 - 279197 + | insulinase family metalloproteinase rmuC 280441 - 279200 - | DNA recombination protein TERM 248 279995 - 280008 + g 70 -3.1 -4.88293 | ATGTTTTAAGATGTC CGTAA GAGC TTGCG TTTCTTTTTCAAGTT pssA 281244 - 280438 - | phosphatidylserine synthase TERM 249 281001 - 281015 + g 76 -7.1 -4.15841 | opp_overlap 280982 281012, overlap 281008 AGAGAGAGTCGAACT GCGCT CCGAA AGCGC TTTCTGCTTTCATAA TERM 250 281355 - 281343 - H 79 -5.5 -5.09426 | TCTAAGTTGAAAAAA GCTCC TCA GAAGC ACATTTTTTTCCGGA CF0236 281373 - 281552 + | hypothetical protein nrdA 281619 - 284756 + | ribonucleotide-diphosphate reductase subunit alpha TERM 251 285543 - 285514 - g 74 -3.7 -5.02606 | gap 1, opp_overlap 285529 TATTAAAGAAGAAAA TCCTGAAGTATGGT CTC AACA-ACTTCAAGA CGAAATCGTTGATCT TERM 252 285731 - 285718 - g 74 -5.3 -4.6902 | CTATAATTCTAAAAA TCCAT TCCC ATGGA TGAGTGAAACTATAG nrdB 284771 - 285820 + | ribonucleotide-diphosphate reductase subunit beta TERM 253 285845 - 285884 + F 79 -9.5 -3.3579 | gap 1, opp_overlap 285844 285848, overlap 285843 285846 AGTTATTTCTATAAG TGATTGA-CGACTTTCAG AGTTC CTGAATGTCGTTCAATCG TATTTGGAAAACTTT TERM 254 285846 - 285883 + F 81 -10.8 -2.60992 | gap 1, opp_overlap 285844 285848, overlap 285845 285843 GTTATTTCTATAAGT GATTGA-CGACTTTCAG AGTTC CTGAATGTCGTTCAATC GTATTTGGAAAACTT TERM 255 286297 - 286318 + G 90 -8.8 -4.89009 | opp_overlap 286297 286296, overlap 286270 TACTAACCTGAGAAT TGTTTGCG GTGATG CGCAAACA TTTTTCCTTCACTAT trmB 285992 - 286666 + | tRNA (guanine-N(7))-methyltransferase rrm3 286780 - 287373 + | tRNA/rRNA methyltransferase murB 288241 - 287351 - | UDP-N-acetylenolpyruvoylglucosamine reductase nusB 288772 - 288308 - | transcription antitermination protein NusB TERM 256 289029 - 289012 - H 80 -6.3 -4.68994 | ATGACGAGGTAAAAA GTTGGCT ACTA AACCAAC AGACAATGGGATTTC infC 289189 - 289749 + | translation initiation factor IF-3 rpmI 289727 - 289921 + | 50S ribosomal protein L35 rplT 289942 - 290307 + | 50S ribosomal protein L20 TERM 257 290896 - 290869 - g 71 -7.6 -3.81259 | opp_overlap 290892 AGAGAACTTAGCAAA GGGCAACCTCCC ATAA AGGTTGTTGCCC CCGGCCTCTGTTTCC pheS 290320 - 291345 + | phenylalanyl-tRNA synthetase subunit alpha TERM 258 292459 - 292473 + G 76 -3.6 -5.20222 | TAAGAAAGATAATCT TCGTTA TTT TAATGA TTTTCTTTATTTCCT TERM 259 293599 - 293587 - g 75 -2.7 -5.24129 | TTGTCTGAGAAAAAA TAGAC AAA ATCTA TCTAACCTTAAACCT cef 291653 - 293680 + | calcium binding EF-hand protein precursor CF0248 294770 - 293667 - | hypothetical protein TERM 260 294074 - 294058 - G 71 -3.7 -4.90296 | AAAATCTTAGAAAAA GGATTGT CAT AGAATCC GAACTCAATTTCAGG CF0249 295844 - 294771 - | hypothetical protein TERM 261 295377 - 295394 + g 100 -5.7 -5.94713 | opp_overlap 295377 295376 GTGGTCAACAGTAAT GAAAATA CGGT TATTTTC TTTTTTTTGTAGCGT TERM 262 296535 - 296521 - g 70 -5.7 -4.41114 | opp_overlap 296521, overlap 296517 TCATGATATAACAAA TACCG ATGAA CGGTA TTTACGTGCTAGAAT mesJ 295958 - 296911 + | PP-loop superfamily ATPase TERM 263 299169 - 299137 - g 93 -7.7 -5.47159 | opp_overlap 299140, overlap 299140 CTGAAGAAAGAAAAA CGACAGCATATCATG AAT CAGGACATGCCGTTG TGGGGCTTTGTGTTC ftsH 297087 - 299828 + | cell division related ATP-dependent zinc proteinase Clp TERM 264 299854 - 299885 + T 72 -8.3 -3.38812 | gap 1, opp_overlap 299861, overlap 299861 ATCTAGAGTTGATAC TAAAAAA-GCCACA AATAC TGTGGCTTTTTTTA TCTTATTACAAAAAA TERM 265 299877 - 299861 - T 95 -8.7 -5.21709 | opp_overlap 299861 299854 GTTGATACTAAAAAA GCCACAA ATA CTGTGGC TTTTTTTATCTTATT TERM 266 299861 - 299877 + T 100 -8 -5.86465 | opp_overlap 299861, overlap 299854 GTTGATACTAAAAAA GCCACA AATAC TGTGGC TTTTTTTATCTTATT pnp 302017 - 299933 - | polynucleotide phosphorylase/polyadenylase TERM 267 300091 - 300073 - G 70 -9.6 -2.74604 | overlap 300072 300081 AGAACTCAGAAATAT GGCAAAGA CCT TCCTTGCC GGGGAGGATCTCAAC TERM 268 301207 - 301228 + g 100 -6.7 -5.5762 | gap 1, overlap 301223 TATCATTTTCTAGTT GCTTT-GAAG CTG CTTCGAAAGC TTTTTTCTCTTTAAT rpsO 302333 - 302064 - | 30S ribosomal protein S15 yfhC 302578 - 303051 + | cytosine/adenosine deaminases CF0255 303048 - 303278 + | hypothetical protein CF0256 303982 - 303275 - | hypothetical protein TERM 269 303977 - 303987 + g 73 -6.8 -4.25566 | opp_overlap 303976 303977 ATCTGGGAAGATAAC CCTC ATG GAGG TTTTACCTGATTCTT CF0257 304597 - 304067 - | hypothetical protein CF0258 305135 - 304617 - | hypothetical protein CF0259 305689 - 305186 - | hypothetical protein TERM 270 305850 - 305864 + H 70 -7.2 -3.86015 | opp_overlap 305858, overlap 305843 TAAAAAAGTTTTGGT CTCTAA AAT TTAGAG TTTCTAAAGAAAATA CF0260 305930 - 306142 + | hypothetical protein TERM 271 306474 - 306497 + G 82 -6 -4.90381 | gap 1 GTTCTTCATTGTTTT GGGCTTTAGGA CTG TCC-ACAGCCC TTTTATTATCTTGGG TERM 272 307012 - 307002 - g 72 -3.2 -5.14163 | AGCTACTAAGAAAAA GCCT AGA AGAC ATGTGTAATAGTCTT TERM 273 307302 - 307282 - g 70 -9.1 -3.13403 | opp_overlap 307274 307297, overlap 307280 307297 307301 GGTTCGTGAGGAATA TCTTGCCTT GCA AAAGCAAGA GGAGAATTCCTCTAA mhcA2 306170 - 307432 + | myosin heavy chain map 308264 - 307389 - | methionine aminopeptidase TERM 274 308154 - 308168 + g 75 -2.8 -5.29445 | AATAATATCGTATTG CGATGC ATA GTATTG TTTTTGTTGTTCCCA CF0263 308885 - 308274 - | multiple antibiotic resistance protein CF0264 309506 - 308898 - | multiple antibiotic resistance protein yzeB 312033 - 310165 - | ABC transporter adk1 309606 - 310256 + | adenylate kinase TERM 275 310325 - 310339 + gF 76 -7.2 -4.254 | opp_overlap 310327 TAGCGCTGTGCTATA GACTTT AGT AAAGTC TTTGTTAGATCTTCA fumC 312050 - 313432 + | fumarate hydratase ychM 315129 - 313429 - | sulfate transporter CF0269 315198 - 315368 + | hypothetical protein TERM 276 315588 - 315599 + G 86 -2.2 -5.97979 | AAGAAATTGCTGATA TGGC TCAA GTCA TTTTTTTCTTGTTCT TERM 277 316023 - 316011 - g 86 -4.7 -5.42259 | TCATGCTTAAAAAAA GAGCC TCA GGCGC GATTGCTAAGGAACT TERM 278 316298 - 316311 + G 71 -3.9 -4.9934 | GGCATTTTACTGGCT GTTAA TGCT TTAAC TTTTTCTAATGTTCT nhaD 315407 - 316669 + | sodium/proton antiporter TERM 279 316675 - 316692 + F 76 -4.3 -5.03747 | ATTTTTTTGAGTTGG TTTTTTT GGTT AAAAAAA TTTTTTAAAAACTTT TERM 280 316703 - 316693 - f 76 -2.6 -5.40072 | opp_overlap 316693 TTTTGGTTAAAAAAA TTTT TTA AAAA CTTTGTTTTAATAAA TERM 281 317407 - 317424 + G 77 -8.5 -3.87149 | TAAGTGGCGTCATAC TCCTGAA CATA TTCAGGA TTTAGCTTTGATCGC TERM 282 318304 - 318325 + G 77 -6.5 -4.65933 | TCTCATTGTGGGAAC TCCTACAGC AGGG GCTGGGGGA TTTGTTTTCAACGTA CF0271 316781 - 318571 + | hypothetical protein TERM 283 318638 - 318671 + F 100 -12.7 -5.42259 | opp_overlap 318638 CTGTTATATTAATAA CCCTTAGAAAAAG TAAAAAAT CTTTTTCTAAGGG TTTTTTTAAGCATCA TERM 284 318671 - 318638 - f 95 -12.7 -3.7732 | opp_overlap 318638 CTGTTATATTAATAA CCCTTAGAAAAAG TAAAAAAT CTTTTTCTAAGGG TTTTTTTAAGCATCA ispH 318711 - 319640 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 285 320044 - 320065 + GT 88 -3.7 -5.75945 | overlap 320045 TCTCGTATACACCGC TTGTTGTCT TTAC AGACGGCAG TTTTTTTTAAAGAAT TERM 286 320098 - 320120 + GT 77 -4.8 -4.99861 | opp_overlap 320098, overlap 320100 320102 TTTTATGAAACACAA TTGTCACAAG CTT CTTGTGTCTA TTTTTATGGTTCCTC TERM 287 320100 - 320118 + GT 78 -7.4 -4.11322 | opp_overlap 320098, overlap 320098 320102 TTATGAAACACAATT GTCACAAG CTT CTTGTGTC TATTTTTATGGTTCC TERM 288 320102 - 320116 + GT 77 -8.6 -3.63511 | opp_overlap 320098, overlap 320100 320098 ATGAAACACAATTGT CACAAG CTT CTTGTG TCTATTTTTATGGTT CF0273 319603 - 320325 + | hypothetical protein CF0274 321811 - 320333 - | hypothetical protein TERM 289 321225 - 321235 + g 79 -5.4 -4.91357 | CTAGCAGAATCTTTA GAAC AGT GTTC TTTTATTGTCTGTTT CF0275 323346 - 321832 - | hypothetical protein TERM 290 323149 - 323159 + g 79 -5.4 -4.86001 | opp_overlap 323149 CTTATTTGAAAAAGT CTGT TCC ACAG TTTTTGTGGAATAAT lcrH2 323889 - 323371 - | type III secretion chaperone low calcium response protein H TERM 291 323731 - 323754 + g 81 -6.8 -4.76041 | overlap 323734 ATAAACACGCTCTAA CTCTTCAGAA GAAA TTCTGAATAG TTTTTGATAGGTGTC CF0277 325337 - 323889 - | hypothetical protein CF0278 325702 - 325989 + | hypothetical protein xerD 326882 - 325986 - | site-specific tyrosine recombinase XerD TERM 292 326326 - 326356 + g 100 -16.3 -4.26079 | gap 1, overlap 326320 326328 GCATCGATAGTCTTA CA-GGCTCGTTCCC CTAG GGGAACGAGCCGTG TTTTAGATCCTTTCC TERM 293 326328 - 326353 + g 100 -19.1 -2.82324 | overlap 326320 326326 ATCGATAGTCTTACA GGCTCGTTCCC CTAG GGGAACGAGCC GTGTTTTAGATCCTT pgi 326955 - 328562 + | glucose-6-phosphate isomerase TERM 294 328824 - 328839 + G 86 -7.6 -5.14525 | TACAGATTTTCCCAA GAAACC ACGT GGTTTC TTTTGTCTTTTTTTT ltuA 328640 - 328921 + | late transcription unit A protein mdhC 329140 - 330126 + | malate dehydrogenase CF0283 330148 - 330972 + | hypothetical protein dadA 332002 - 330962 - | glycine dehyrogenase TERM 295 331096 - 331054 - G 91 -12 -3.89501 | opp_overlap 331059, overlap 331059 TAAGACCGTGATAAA GTAGACCTTTGGATCCTAGG CCT CCTAGGAACCAGAGGTTTTC TTTTATTCTGCTAAT TERM 296 331059 - 331091 + g 100 -17.1 -5.31091 | opp_overlap 331059 331054 CCGTGATAAAGTAGA CCTTTGGATCCTAGG CCT CCTAGGAACCAGAGG TTTTCTTTTATTCTG TERM 297 331091 - 331059 - G 100 -14.9 -3.05997 | opp_overlap 331059, overlap 331054 CCGTGATAAAGTAGA CCTTTGGATCCTAGG CCT CCTAGGAACCAGAGG TTTTCTTTTATTCTG TERM 298 331815 - 331834 + g 74 -6.4 -4.38712 | opp_overlap 331815 ATAATCCCCAAGTCA GCAAGCGG TGGT TTGCTTGC TTTTCTCCCGGTAAA TERM 299 332148 - 332125 - R 100 -15.4 -5.74086 | opp_overlap 332131 332144, overlap 332133 AAATTAAAGAAAAAA GAGAGAGACC TAGA GGTCTCTCTC CAAGGGTGATTAGGG arcD 333626 - 332166 - | amino acid permease ebp04 334223 - 333636 - | hypothetical protein CF0287 335591 - 334257 - | hypothetical protein TERM 300 335230 - 335243 + g 76 -4.5 -5.0538 | opp_overlap 335230 TGCTTTTCATCAACA GTTGC TAGG GCAGC TTTTTTAGGATAAAA TERM 301 335294 - 335306 + g 70 -3.4 -4.9792 | AATCCACAGATATTT GAGA GTTGG TCTC TTTTTCTATCGAGTG omp04 336547 - 335693 - | outer membrane protein aroDE 337970 - 336537 - | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein aroB 339090 - 337951 - | 3-dehydroquinate synthase TERM 302 338083 - 338095 + g 88 -2.7 -5.9873 | GACCATCCTTAAAGC TTTGT TCG ACAGA TTTTTTTTGTCATAA aroC 340166 - 339087 - | chorismate synthase aroK 340684 - 340163 - | shikimate kinase aroA 341957 - 340620 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 303 340936 - 340951 + gr 72 -4.7 -4.73432 | opp_overlap 340936 AGCTCTTCGGTAATA GCGAT AATGCG ATCGC TTTCTTTATCTTTAG TERM 304 341251 - 341219 - GR 76 -7.8 -3.91897 | GGGGTGATTTAGAAA GTAGCGCAGC CGCAGCAAGAAAT GCTGCGCTAC TAAAGTCTCCTCCAA TERM 305 341434 - 341416 - GR 79 -3.1 -5.46706 | overlap 341418 ATGGTAAAAGAAAAA GGTCCTT CAGCT AAGGAGC ATGCCATAGCAAGAG ebp05 342700 - 342041 - | hypothetical protein bioA 343959 - 342682 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 306 342931 - 342962 + g 93 -11.2 -4.16767 | gap 1, opp_overlap 342940 TAGAGAACCGTACTG TGATTGA-AATTGTC TAT GACAATTCTCAATCA TTTCTCGTTGTTGTT bioD 344576 - 343950 - | dethiobiotin synthetase bioF2 345709 - 344561 - | 8-amino-7-oxononanoate synthase bioB 346683 - 345688 - | biotin synthase fabG2 347776 - 346931 - | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 307 347476 - 347488 + g 78 -4.1 -5.31275 | GAATAGGGCGATTAA GTTCT TTG AGAGC TTTTTTATAATCAGA CF0300 348870 - 347755 - | hypothetical protein CF0301 349619 - 348960 - | hypothetical protein phhA 350439 - 349600 - | phenylalanine 4-monooxygenase dapB 350651 - 351391 + | dihydrodipicolinate reductase asd 351575 - 352576 + | aspartate-semialdehyde dehydrogenase TERM 308 353263 - 353238 - g 72 -8.3 -3.48738 | opp_overlap 353239, overlap 353236 353239 TAGGATTATTAAAGA TGCTCAACTCA TTCC CGAGTTGAGCT TTGAGGAAATGCAAA TERM 309 353239 - 353262 + G 82 -11.1 -3.54424 | opp_overlap 353239 353238 353236 AGGATTATTAAAGAT GCTCAACTC ATTCCC GAGTTGAGC TTTGAGGAAATGCAA TERM 310 353262 - 353239 - g 81 -11.8 -2.68761 | opp_overlap 353239, overlap 353238 353236 AGGATTATTAAAGAT GCTCAACTCA TTCC CGAGTTGAGC TTTGAGGAAATGCAA lysC 352564 - 353886 + | aspartate kinase dapA 353899 - 354771 + | dihydrodipicolinate synthase TERM 311 355133 - 355145 + G 70 -5.5 -4.43844 | overlap 355134 TATATATCGATTTCT TGCGT TTT ACGCG TTTTATGCATGCTCC CF0307 354902 - 355210 + | hypothetical protein CF0308 355409 - 355834 + | hypothetical protein TERM 312 356048 - 356072 + F 100 -13 -6.09196 | opp_overlap 356048 GGCGAGTTTGTAAAA GTATCTGCGA TTTTT TCGCAGATAC TTTTTTTGTTTTGAG TERM 313 356072 - 356048 - f 100 -13 -4.09685 | opp_overlap 356048 GGCGAGTTTGTAAAA GTATCTGCGA TTTTT TCGCAGATAC TTTTTTTGTTTTGAG TERM 314 356559 - 356536 - f 72 -8.2 -3.36054 | opp_overlap 356533 356536, overlap 356534 TAAAGCTACAGAATA TTCCCTTGAT GGTC ATCAAGGGTA ATGATTAATTAGGAG bioY 356579 - 357169 + | biotin synthase TERM 315 357189 - 357223 + T 89 -11.1 -3.67296 | gap 1, opp_overlap 357186 357197, overlap 357197 TATTAAAAATTATTT TAGAAAAAGGTTCTAC ATAA GTAGAACCTTTTT-TA TTTAGATGCATGATC TERM 316 357216 - 357197 - T 100 -10.8 -4.86001 | opp_overlap 357189 357197 ATTATTTTAGAAAAA GGTTCTAC ATAA GTAGAACC TTTTTTATTTAGATG TERM 317 357197 - 357216 + T 100 -10.8 -5.65927 | opp_overlap 357197, overlap 357189 ATTATTTTAGAAAAA GGTTCTAC ATAA GTAGAACC TTTTTTATTTAGATG CF0310 358128 - 357661 - | hypothetical protein CF0311 359086 - 358112 - | hypothetical protein infA 359386 - 359607 + | translation initiation factor IF-1 TERM 318 359847 - 359830 - g 71 -6.3 -4.2528 | TTTCAACGTAATAAA CCCCATA TCAA TATAGGG ACCATTGGACACGTT TERM 319 360304 - 360289 - g 80 -4.6 -5.18726 | CTTCTAGAAGAAAAA GGCTAC AAAG GTTGCC CTATCATCCGTGGTT tufA 359800 - 360984 + | elongation factor Tu TERM 320 360977 - 360993 + F 72 -5.9 -4.3898 | opp_overlap 360977 CGATTTCAAAAATTA TTGCCTA GTT TAGGTAA TTTTATAAGCATGAT TERM 321 361002 - 361031 + F 100 -12.3 -4.26188 | opp_overlap 361002 TAGGTAATTTTATAA GCATGATTAGGGC GTCG GTCTTAATCATGC TTTTGGGTGTGTAGC secE 361143 - 361388 + | preprotein translocase subunit SecE nusG 361393 - 361941 + | transcription antitermination protein NusG rplK 362048 - 362473 + | 50S ribosomal protein L11 rplA 362496 - 363194 + | 50S ribosomal protein L1 TERM 322 363232 - 363222 - g 81 -5.4 -5.03961 | overlap 363227 363229 AATGAAAGAAGAAAA GAAG TTA CTTC TTCAAGAGGTAGAAG rplJ 363208 - 363720 + | 50S ribosomal protein L10 CF0319 364231 - 363743 - | hypothetical protein TERM 323 364084 - 364073 - G 74 -4.4 -4.87803 | GACTGTTAAAGAAAA GACT TCTA AGTC TGATGCTGAAGATAC TERM 324 364192 - 364156 - G 79 -11.2 -2.52795 | opp_overlap 364158, overlap 364163 AAGGCTTGTAATTTA TAGAAAAGAAAAATCT ATGAG AGATTTTTCTTTTCTT TTTTTTATCATGTAT TERM 325 364158 - 364190 + g 100 -13.8 -6.00086 | opp_overlap 364156 364163 GGCTTGTAATTTATA GAAAAGAAAAATCT ATGAG AGATTTTTCTTTTC TTTTTTTTATCATGT TERM 326 364185 - 364163 - G 82 -7.9 -4.57474 | opp_overlap 364158, overlap 364156 GTAATTTATAGAAAA GAAAAATCT ATGAG AGATTTTTC TTTTCTTTTTTTTAT TERM 327 364353 - 364333 - g 95 -4.7 -5.76949 | TAGCGTCAAAAAAAA GGAAGACAT CTT AGATCTTCC AAATCTTATTGAAAT TERM 328 367370 - 367358 - g 91 -7.7 -5.26119 | GCTTCAAAAAGAAAA CTCCA GGT TGGAG ATAAAATGGCAGGAC rpoB 364295 - 368053 + | DNA-directed RNA polymerase subunit beta TERM 329 372226 - 372209 - g 70 -3.5 -4.91459 | gap 1, opp_overlap 372210 372212, overlap 372212 CAATACTTAGAAAAA GAACAAGA GGA TCTTGT-C TTTGACTTTGTAAGC TERM 330 372224 - 372212 - g 77 -6.3 -4.5448 | opp_overlap 372212 372210, overlap 372209 TACTTAGAAAAAGAA CAAGA GGA TCTTG TCTTTGACTTTGTAA rpoC 368081 - 372262 + | DNA-directed RNA polymerase subunit beta' talA 372380 - 373363 + | transaldolase B TERM 331 373624 - 373602 - g 82 -11.4 -3.25169 | opp_overlap 373598 373616, overlap 373617 CTAAGAATTTATGAA GCATCTCCTA TAC TAGGAAATGC TGCCGTTTCCGTATC fer1 373404 - 373799 + | ferredoxin CF0324 374547 - 373804 - | hypothetical protein TERM 332 374019 - 374004 - G 85 -5.4 -5.26875 | opp_overlap 374004 374005 374012, overlap 374005 CTTGTAAGCAAAAAA CCTTCC CCCA GGAAGA ATTTTTTTCTGTTTT TERM 333 374637 - 374627 - H 86 -2.6 -5.87688 | opp_overlap 374627 ATAATCGAAAAAAAA TTTA AGA TAAA CTCTGTTTTCTCATG atpE 374664 - 375290 + | V-type ATP synthase subunit E CF0326 375338 - 376138 + | hypothetical protein atpA 376132 - 377898 + | V-type ATP synthase subunit A atpB 377913 - 379229 + | V-type ATP synthase subunit B TERM 334 379678 - 379691 + G 71 -5.3 -4.56597 | opp_overlap 379668 ATTAAGAAACGTTTC GATTC GCGT GAATC TTTTTGAGAAAAAAC TERM 335 379717 - 379706 - g 80 -4.4 -5.24129 | opp_overlap 379696 379711 CTTTTTGAGAAAAAA CTCA TTCC TGAG ACTACTCGGATGATT atpD 379214 - 379840 + | V-type ATP synthase subunit D atpI 379831 - 381780 + | V-type ATP synthase subunit I atpK 381915 - 382340 + | V-type ATP synthase subunit K CF0332 382291 - 382779 + | hypothetical protein valS 382835 - 385657 + | valyl-tRNA synthetase TERM 336 388153 - 388143 - g 70 -3.2 -4.94902 | GAAGGATGAGAAAAA GGTC TAT AACC TTTTGTGCAATAACT pknD 385678 - 388479 + | serine/threonine-protein kinase uvrA 393897 - 388474 - | excinuclease ABC subunit A TERM 337 389495 - 389517 + g 74 -6.2 -4.40237 | opp_overlap 389488 389484, overlap 389498 GAAAGGTACCCTCCT TGAGGACCTG ATC CCGGTCCTAA TTTTACTGTATGATC TERM 338 389570 - 389552 - G 73 -9.6 -3.09581 | opp_overlap 389562 TAAAGCTGTAATACA TCGCTACG ATC CGTAGCAA TCACGGTATTATTGT TERM 339 392435 - 392455 + g 80 -11.2 -2.78384 | overlap 392439 GCTCCCAGATGCTTG GCAAGAGC TGTAC GCTCTTGC TCTCCTCCAGAGAGC TERM 340 395382 - 395397 + G 78 -4 -5.27938 | gap 1, opp_overlap 395382, overlap 395384 395385 395385 ATTGTTTATACGGAA TCTGGAG GAT CTCC-GA TTTTTCTTTCCAAAT pyk 394233 - 395678 + | pyruvate kinase TERM 341 395662 - 395688 + T 79 -9.5 -3.36276 | opp_overlap 395664, overlap 395660 395664 TAAATGACATCATTA CAGCATCAGCT AAATA AGCTGATGCTC TCTTACTTCTTATAA TERM 342 395686 - 395664 - T 84 -12.1 -2.85378 | opp_overlap 395662 395660 395664 AATGACATCATTACA GCATCAGCT AAATA AGCTGATGC TCTCTTACTTCTTAT TERM 343 395664 - 395686 + T 89 -12.1 -3.23854 | opp_overlap 395664, overlap 395662 395660 AATGACATCATTACA GCATCAGCT AAATA AGCTGATGC TCTCTTACTTCTTAT CF0337 396033 - 395698 - | hypothetical protein TERM 344 396061 - 396080 + r 79 -3.6 -5.40072 | AAAAATCAAAAAATT TCTTAAGC GATA GTTTGAGA TTTTTTTGAGACAGA htrB 397421 - 396063 - | lipid A biosynthesis lauroyl acyltransferase TERM 345 396967 - 396957 - G 73 -6.8 -4.21343 | opp_overlap 396956 GGTAATATACAGAAA GGGA AGT TCCC AATTTGCCTGATGAC CF0339 398916 - 397633 - | hypothetical protein CF0340 399692 - 398898 - | hypothetical protein TERM 346 400295 - 400310 + G 72 -4.6 -4.69664 | overlap 400297 GTATGGTGGCTGTGG GAGCTC ATAT GAGCGC TTTTTGGATAGTATG cydA 399892 - 401232 + | cytochrome D ubiquinol oxidase subunit I cydB 401235 - 402296 + | cytochrome D oxidase subunit II TERM 347 402389 - 402364 - T 72 -9.1 -2.74322 | opp_overlap 402357 402368 402382, overlap 402363 GGTAATTGCCTAAAG GGGATTTCTAC AATT GTAGAAATCTC TGAAAGGTTTCTTTA TERM 348 402497 - 402487 - T 79 -5.4 -5.14477 | TAGACACTCAAAAAA TTCG AAA CGAA CTTAGAAATAGTCTA awa2 403739 - 402510 - | cell wall-associated hydrolases CF0344 404625 - 403888 - | hypothetical protein TERM 349 404735 - 404763 + H 84 -5.3 -5.5454 | overlap 404737 TTGATTGCTAGTTTC TAGCTTAACCTCT TGA AGGTGTTAAGCAA TTTTTCTTTGTTTGG phoH 404974 - 406266 + | ATPase CF0346 406728 - 406279 - | hypothetical protein TERM 350 407529 - 407514 - g 72 -9 -3.35371 | overlap 407518 CAGAGGGTGAAGGAA GCAAGG AAAG CCTTGC TAACCGAGAAGAAAA TERM 351 407597 - 407572 - g 71 -4.2 -4.89567 | opp_overlap 407554, overlap 407551 407574 TTGGAAAACACAAAA TATTTTTCAA AAATCG TTGAAAAACA GAGAAGGGAAAACCC ileS 407492 - 410623 + | isoleucyl-tRNA synthetase TERM 352 410654 - 410680 + T 86 -5.9 -5.54403 | gap 1, opp_overlap 410654 AGTAAGTGTGAAAAA GAAGACTCCTAG TTAA CAAGG-GTCTTC TTTTTATTGTTTTTT TERM 353 410680 - 410654 - T 74 -5.9 -4.62872 | gap 1, opp_overlap 410654 AGTAAGTGTGAAAAA GAAGACTCCTAG TTAA CAAGG-GTCTTC TTTTTATTGTTTTTT lepB 412576 - 410684 - | signal peptidase I TERM 354 412318 - 412305 - G 74 -4.5 -4.89477 | TGGCGAATAAGAAAA GCTAC AACA GCAGC AAAAAGAATGGCTTT TERM 355 412399 - 412416 + g 74 -6.3 -4.35663 | overlap 412393 412400 ATTGTTGCGCTTGTT TTGCAAG TTGG CTTGCAG TTTCTTGATCTTGTT CF0349 413645 - 412896 - | hypothetical protein rpmE2 413729 - 414049 + | 50S ribosomal protein L31 type B TERM 356 414508 - 414522 + G 74 -5 -4.78107 | opp_overlap 414508 AAGTGGAAGTTAAGA TTTCTG ATC CGGAAA TTTTTAATAATCCTA prfA 414453 - 415538 + | peptide chain release factor 1 TERM 357 415915 - 415927 + G 75 -7.7 -4.09628 | GTAAAAAAATATTGT CCTGA GAT TCAGG TTGTTCTTTCAGATA rrm4 415516 - 416367 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 358 416674 - 416697 + G 81 -7.4 -4.64383 | opp_overlap 416674 416677, overlap 416677 GTGAAGCTGATTTAA CGACTTCAGG AAAC CCTGGAGTGG TTTTGCTTTGTGGTT TERM 359 416861 - 416843 - g 70 -5.4 -4.35339 | overlap 416839 AGATCAATTAAGAAA TTTGATTT CAA AAACCAAA GCAGAGCTGTATAAT ffh 416394 - 417740 + | signal recognition particle GTPase rpsP 417731 - 418090 + | 30S ribosomal protein S16 trmD 418107 - 419174 + | fused tRNA (guanine-N(1)-)-methyltransferase/uncharacterized domain-containing protein rplS 419199 - 419567 + | 50S ribosomal protein L19 TERM 360 419829 - 419813 - g 76 -7.3 -4.3078 | AATGATAGCAAGAAA CTTTCCC CCA AGGAAAG AGGCAGAATGCGCGA rnhB 419621 - 420250 + | ribonuclease HII gmk 420262 - 420876 + | guanylate kinase ebp06 420873 - 421169 + | hypothetical protein TERM 361 421291 - 421301 + G 76 -6.8 -4.42513 | TCGTAGGTTATTAGG GGAC GAC GTCC TTTATATTTGTGGTT metG 421169 - 422824 + | methionyl-tRNA synthetase recD2 425041 - 422831 - | ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V alpha TERM 362 422931 - 422944 + g 100 -5.3 -5.84381 | TTATCGTTTCTTGTA GCTAT AGCA ATAGC TTTTTTTGTTCCTAC TERM 363 423884 - 423914 + g 79 -11.3 -2.50791 | overlap 423883 423882 423881 AATTTCTGTCATGCG TTTAGCTGCTTTC CCTGT GGGAGCAGCTAAA ATGATTTTATAGGTA TERM 364 425417 - 425429 + r 76 -2.7 -5.44119 | overlap 425408 TGAAGCTAAATTTTT TATTC GAT GAGTA TTTTTTTAGGATGAG TERM 365 425555 - 425585 + r 76 -2.6 -5.4756 | opp_overlap 425564, overlap 425559 425561 AGCTTGATTAGTCCG CAGAGGGAAGAATC TTG GATTCTTCTGTTTC TTTTTTGTTCGACTT TERM 366 425559 - 425581 + r 79 -5.6 -5.20735 | opp_overlap 425564, overlap 425555 425561 TGATTAGTCCGCAGA GGGAAGAATC TTG GATTCTTCTG TTTCTTTTTTGTTCG TERM 367 425561 - 425579 + r 100 -10.4 -4.1934 | opp_overlap 425564, overlap 425559 425555 ATTAGTCCGCAGAGG GAAGAATC TTG GATTCTTC TGTTTCTTTTTTGTT rhaT2 426566 - 425547 - | transporter TERM 368 426740 - 426750 + G 71 -6.8 -4.08557 | overlap 426739 GTTTACTCTGATGAG GGAG TTT CTCC TTATTATTTGCGCCA TERM 369 427028 - 427041 + G 76 -4.5 -5.1244 | overlap 427016 AGCTTGGGTTTTAAT GAGCC CGAT GGTTC TTTTTATGTTGCTGA bal 426707 - 427480 + | biotin apo-protein ligase-related protein CF0364 428615 - 427815 - | hypothetical protein TERM 370 428233 - 428247 + g 74 -5 -4.68593 | opp_overlap 428216 AAAGTATTTTCCTGA CTTTGC GGA GTAAAG TTTTTCCATAGTAAC TERM 371 428602 - 428592 - G 70 -2.6 -5.17507 | AAAAGCTAATAAAAA TAAA TTC TTTA AAAGTTTAATCATGC TERM 372 428682 - 428718 + r 87 -11.7 -3.31144 | opp_overlap 428682, overlap 428678 TTAGAAAATAGAAAA GGTCTCCTTTCTTTTTT GAG ATAGATGAAAGGAGACC TTATAACGATAGAGA TERM 373 428718 - 428682 - R 100 -9.5 -4.94487 | opp_overlap 428678 428682 TTAGAAAATAGAAAA GGTCTCCTTTCTTTTTT GAG ATAGATGAAAGGAGACC TTATAACGATAGAGA groEL 430389 - 428755 - | chaperonin GroEL TERM 374 429267 - 429297 + g 91 -6.3 -5.40464 | gap 1, opp_overlap 429276 GGATTACAGCAACGC CTCC-AGAAAGTTT TGCT AAACGTTCTTGGAG TTTTTCTTTGTCGTA TERM 375 429314 - 429332 + g 74 -6 -4.3623 | overlap 429310 TTTTCTTTGTCGTAA TCGGAGGT GCT ATCTTCGA TTTGCTTTTTAATAT TERM 376 429353 - 429367 + g 73 -8.6 -3.75911 | overlap 429352 TTTTTAATATTTTCG CATCGA GCT TCGATG TCTTCTTTGTTTCCA TERM 377 429742 - 429769 + g 74 -6.4 -4.32177 | opp_overlap 429750, overlap 429744 AAGAACAAGAGATTC TTCTAAAACACA CTCT TGTGTTTCAGGA TTTGTTGTGAAGTAG groES 430746 - 430438 - | co-chaperonin GroES TERM 378 430834 - 430858 + r 100 -8.7 -6.00814 | TTTTGGCAATGATTT TAGCACTTAAT AAT ATCAAGTGCTA TTTTTTTTAGTTGTT pepF 432700 - 430874 - | oligopeptidase F/B TERM 379 431039 - 431052 + g 71 -3.9 -5.00616 | GCTAAGGACATTATC TTCTT TAGA AAGAA TTTTTTCCGCAAAGC CF0368 433544 - 432789 - | hypothetical protein TERM 380 434527 - 434491 - g 89 -11.7 -3.53224 | opp_overlap 434494, overlap 434493 434494 GACTTGGGTCCTAAA GAGTTTCCAGAGGCAAA AAA TTTGCCTCCGGAAATTT ACTGGATGTCTCGTA TERM 381 434525 - 434493 - g 100 -14.3 -3.34398 | opp_overlap 434494, overlap 434491 434494 CTTGGGTCCTAAAGA GTTTCCAGAGGCAAA AAA TTTGCCTCCGGAAAT TTACTGGATGTCTCG TERM 382 434524 - 434494 - g 100 -17.8 -2.60496 | opp_overlap 434494, overlap 434493 434491 TTGGGTCCTAAAGAG TTTCCAGAGGCAAA AAA TTTGCCTCCGGAAA TTTACTGGATGTCTC TERM 383 434494 - 434524 + G 100 -15.6 -3.78736 | opp_overlap 434493 434491 434494 TTGGGTCCTAAAGAG TTTCCAGAGGCAAA AAA TTTGCCTCCGGAAA TTTACTGGATGTCTC CF0369 433891 - 435147 + | hypothetical protein CF0370 435552 - 435824 + | hypothetical protein TERM 384 436316 - 436327 + G 73 -2.2 -5.24531 | AATTTAAGAAAGAAT TCTC GAGG GGGA TTTTTTATCACCAAT rpiA 435821 - 436522 + | ribose-5-phosphate isomerase A CF0372 436519 - 436959 + | hypothetical protein TERM 385 436981 - 436962 - f 73 -4.4 -4.92757 | opp_overlap 436980 TTATGAAGAATAAAA TAAAATAC CACG GTATCTTA TGGAAAAAATTCCCT yqgE 436981 - 437550 + | hypothetical protein TERM 386 438359 - 438385 + G 79 -11 -3.25088 | overlap 438362 TGTGCCGGCGTTATT CAGCTTTATCCA TTA TGGATGAAGTTG TTACTGGATTTCGCA TERM 387 438362 - 438382 + G 76 -9.1 -3.76176 | overlap 438359 GCCGGCGTTATTCAG CTTTATCCA TTA TGGATGAAG TTGTTACTGGATTTC gsa 437644 - 438957 + | glutamate-1-semialdehyde aminotransferase TERM 388 439243 - 439257 + G 80 -2.1 -5.55769 | GGAATTCATGGCTTA TCCTG CGCTA TAGGA TTTTTTGTTGTAAAA TERM 389 439330 - 439347 + G 79 -6.9 -4.57073 | opp_overlap 439330 CTTTCGGGAAGAGTA GGGGGAG CAAT CTCCGCC TTTTTAGGCACCATG abc1 438994 - 439779 + | ABC transporter TERM 390 439960 - 439974 + G 73 -10 -2.82742 | opp_overlap 439959, overlap 439956 TCTTCGTCATATTAT GGGACT AGA AGTCCC TGATTCTGGAAAGGT abc2 439790 - 440563 + | ABC transporter CF0377 440563 - 441366 + | hypothetical protein TERM 391 442745 - 442723 - g 81 -7 -4.75063 | ATAAAACGTGAAAAA GCTCCTTCAT ATC AAGAAGAAGC GGAGGCTATGCAGCA TERM 392 443094 - 443107 + G 71 -6.7 -4.09511 | opp_overlap 443087 443101, overlap 443089 GTTAGAAGGCGAAGC CGAGA AGCT TCTCG TTTTAGAAGAGTCTT TERM 393 443775 - 443793 + G 72 -8.8 -3.61517 | TGTCGGTATTCAGAT GCGTAGAG TGG CTCAACGC TTGTTAGAAAGACGT clpB1 441427 - 444021 + | ATP-dependent Clp endopeptidase ATP-binding chain B TERM 394 444055 - 444093 + T 84 -3.9 -5.71983 | gap 1 GTTACTGTGATTCTA GATCCTCTTGCTCAAGTA TTTT TTTTAGAGCA-GAGGGTC TTTTTTTATGCTTCA TERM 395 444166 - 444140 - T 74 -9.3 -3.0122 | AAAGAAACTGAGAGA GGCCCTGCCCC GGGAT GGGGCAGGGGA GGTGGATGAGACTAG pmp02 445788 - 444178 - | polymorphic outer membrane protein TERM 396 444865 - 444880 + g 70 -5.4 -4.4521 | GTAATAGATAGAACC TGCGTA GATA TGCGCA TTGTTTTTGGCTACT pmp03 446720 - 445791 - | polymorphic outer membrane protein TERM 397 446866 - 446889 + H 78 -6.9 -4.34947 | opp_overlap 446865 446870 CTTTTAGAAGATCAT GAAATAGTA ACTATC TACTATTTC TTTTCATGATCTATT CF0381 446998 - 448503 + | hypothetical protein CF0382 448584 - 449036 + | hypothetical protein CF0383 449051 - 449446 + | hypothetical protein TERM 398 449495 - 449525 + F 100 -7.7 -5.93809 | GAGCGTTGTAAGAAA CCGTTCTATAATC TCCAT GGTTGTAGAATGG TTTTTTTTATGAGAA CF0384 449709 - 450005 + | hypothetical protein CF0385 450588 - 450956 + | hypothetical protein TERM 399 452225 - 452201 - g 82 -11.5 -3.1739 | overlap 452203 AGATGAGGCCATGAA TACTTCCGTAG ATT CTACGGAAGAA GTCATCAGAGAAGAT TERM 400 452223 - 452203 - g 95 -14.1 -3.1478 | overlap 452201 ATGAGGCCATGAATA CTTCCGTAG ATT CTACGGAAG AAGTCATCAGAGAAG pkn2 451200 - 453056 + | serine/threonine protein kinase TERM 401 453402 - 453371 - g 79 -6.7 -4.52589 | CCCGTGTAGAGAAAA CTTTAGGGTATAC CCCTAC ATATACCCTAGAG CTAAAAATTGACGGT TERM 402 453664 - 453685 + G 77 -6.5 -4.52589 | opp_overlap 453664 GCTAATCCCCGAAAT GCTGCAGGG GGTA CTCTGAAGC TTTTATCTGCCAAAG ligA 453064 - 455052 + | NAD-dependent DNA ligase LigA TERM 403 456993 - 456975 - g 72 -9.6 -3.08088 | overlap 456964 456977 AAATTGTGGAAGACA CACCACAG GGC CTGTGATG TAGAAACTTTTATAG TERM 404 458353 - 458329 - g 86 -7.2 -5.17488 | AAGAGGAAAATAAAA TCGTAGCTTA TCGTT TACGCTACGA TAATGAGGTATTGCG mhcA4 455217 - 459662 + | myosin heavy chain major plasmodial mhpA 461241 - 459721 - | pentachlorophenol 4-monooxygenase CF0390 462337 - 461390 - | hypothetical protein TERM 405 462743 - 462773 + G 70 -3.2 -4.90471 | overlap 462729 462745 TTATACCGCCACGGA TATTGTCGCTCGCT ATA AGCGAGCTAAAGGA TTTTCTGTTTTACAT leuS 462567 - 465029 + | leucyl-tRNA synthetase kdtA1 465026 - 466330 + | 3-deoxy-D-manno-octulosonic-acid transferase pfkA1 468213 - 466591 - | diphosphate--fructose-6-phosphate 1-phosphotransferase TERM 406 467167 - 467178 + g 86 -4.4 -5.52023 | opp_overlap 467155 467167, overlap 467155 AAATGTCTTCAGAGA CTCT GGAG AGAG TTTTTTATTAATAAT TERM 407 467735 - 467747 + g 87 -3.3 -5.72254 | opp_overlap 467735 AGCTTTTTTACAGTA GCAAG AAT CGTGC TTTTTTGTTCTTTGG hhl 469032 - 468223 - | acyltransferase pfkA2 470811 - 469156 - | diphosphate--fructose-6-phosphate 1-phosphotransferase TERM 408 470869 - 470901 + r 70 -8 -3.28487 | gap 1, opp_overlap 470877, overlap 470877 TTTTTTTATCGACAA TGAGA-AAACCTTCT TTTC AGAAGGTTTATTTCA TGTTCATTGCTATCA TERM 409 470877 - 470892 + r 82 -7.6 -4.56883 | opp_overlap 470877, overlap 470869 TCGACAATGAGAAAA CCTTCT TTTC AGAAGG TTTATTTCATGTTCA TERM 410 470892 - 470877 - R 82 -7.6 -4.58466 | opp_overlap 470877 470869 TCGACAATGAGAAAA CCTTCT TTTC AGAAGG TTTATTTCATGTTCA ybhI 472334 - 470922 - | dicarboxylase translocator TERM 411 472180 - 472160 - G 70 -8.3 -3.32819 | overlap 472163 TAGAGATCCCGATAA TGACTATGG CTC CCATAGGCA CCGGTTGTAGGATAA CF0397 473129 - 472380 - | hypothetical protein CF0398 473367 - 473179 - | hypothetical protein TERM 412 473442 - 473427 - R 71 -7.6 -3.59979 | opp_overlap 473410 473410 TTTGTTTAGGTTAAA CAAGAG CTTT CTCTTG AGGAACATAAGTTTG oppF 474207 - 473422 - | ABC transporter of peptides oppD 475066 - 474200 - | ABC transporter of peptides TERM 413 474443 - 474458 + g 71 -4 -4.99645 | opp_overlap 474443 ATTATGGGTCACCAA CAACAT TGCT GTGTTG TTTTCTTTATGCACT TERM 414 474850 - 474866 + g 75 -8.1 -4.00526 | opp_overlap 474860 TGGTTTTCAAGTCTT TATCTTC AAA GAAGATA TTTCCTTCTAGGATT oppC2 475913 - 475059 - | ABC transporter of peptides oppB2 476955 - 475984 - | ABC transporter of peptides oppA2 478796 - 477180 - | ABC transporter/periplasmic oligopeptide binding lipoprotein component TERM 415 478530 - 478516 - G 77 -10 -3.34962 | TCGGATACGGTATAA CGCTCT GTC AGAGCG AGCTCAGGATGGTTA TERM 416 478798 - 478786 - G 75 -7.7 -4.13014 | opp_overlap 478786 GTCATATGTTTAAAA GCATG TCT CATGC TTGCTCGAGGTGTTT oppA5 480545 - 478932 - | ABC transporter/periplasmic oligopeptide binding lipoprotein component TERM 417 479171 - 479185 + g 71 -4.2 -4.8743 | TATGGTTCCACTTCC CTAGCT GGT GGCTGG TTTCTTTATTTTCGG TERM 418 479679 - 479693 + g 83 -6.4 -5.09762 | opp_overlap 479679 TATAGAAGTTGAACA CACGGA ATA TTCGTG TTTTATTTCTTGAGG oppA4 481975 - 480662 - | ABC transporter/periplasmic oligopeptide binding lipoprotein component TERM 419 481509 - 481493 - G 70 -8 -3.76815 | ATTGAAAATGGCAAA TGCTGG GAATG CCAGCA ATTGAAGTAGCTTGG TERM 420 482230 - 482215 - R 77 -4.8 -5.06451 | opp_overlap 482215 TAGTATGGTAAAAAA TCAATT TGAT AATTGA TTTTGGGAGGGGTTA CF0406 482700 - 482248 - | Holliday junction resolvase-like protein TERM 421 482650 - 482621 - G 91 -13.7 -2.77148 | gap 1, overlap 482616 482614 482623 CTGATGAATAGAGGA GAGGCTGCATAGGC AAG GCCTATAC-GCCTC TGACCGTAGTCTACA TERM 422 482648 - 482623 - G 75 -10.5 -2.92889 | gap 1, overlap 482621 482616 482614 GATGAATAGAGGAGA GGCTGCATAGGC AAG GCCTATAC-GCC TCTGACCGTAGTCTA pyrG 484306 - 482687 - | CTP synthetase kdtA2 485046 - 484282 - | 3-deoxy-manno-octulosonate cytidylyltransferase CF0409 485213 - 485905 + | hypothetical protein mta 486078 - 486962 + | bifunctional nucleosidase TERM 423 487658 - 487644 - g 79 -5.7 -4.98255 | opp_overlap 487646 487656 TCTGAAGGACAAAAA CAGAG GGTAT CTCTG GCTTGCCAGTGTCTC tauB 487242 - 487949 + | nitrate/iron ABC transporter TERM 424 488136 - 488149 + G 76 -3.1 -5.31091 | CTATTTTGACAGGAT TTCCT CTTG AGGGA TTTTCTTTTGTTCTA TERM 425 488381 - 488400 + G 76 -3.5 -5.29716 | GAATCTCAGGTTTTC CTCTCCG AGTATA CGAAGAG TTTTTCTTATGTTAC TERM 426 488607 - 488584 - g 72 -9 -3.41979 | gap 1, overlap 488582 GGAAGAAAGAATAGA GCAGAAGCAAG CAC CTT-CTTCTGC CGTTAGCTCTATGCT CF0412 487946 - 488629 + | hypothetical protein CF0413 489866 - 488640 - | hypothetical protein TERM 427 489012 - 488992 - G 70 -5.4 -4.3739 | CATGCTTTTATAAAA GGAAGTAC TGTGC GTTCTTCC CAAAATAGAGAATCT TERM 428 489056 - 489071 + g 81 -5.4 -5.03314 | opp_overlap 489056, overlap 489057 ATCCAAAAAACGACA TGCGAA TCAG TTCGCG TTTTTTCCCAATAAA TERM 429 489872 - 489891 + H 79 -8 -3.92373 | opp_overlap 489872 CTTTGTCCATAAAAA GAAAAATC CTTG GATTTTTC TTTCTAAATAGAATG TERM 430 489891 - 489872 - H 86 -8 -4.82901 | opp_overlap 489872 CTTTGTCCATAAAAA GAAAAATC CTTG GATTTTTC TTTCTAAATAGAATG dsbG 490138 - 490776 + | disulfide bond chaperone dsbB 490769 - 491179 + | putative disulfide oxidoreductase CF0416 491991 - 491293 - | hypothetical protein CF0417 492643 - 492176 - | hypothetical protein CF0418 493255 - 492800 - | hypothetical protein tgt 494607 - 493489 - | queuine tRNA-ribosyltransferase CF0420 495480 - 494794 - | hypothetical protein CF0421 496205 - 495774 - | hypothetical protein CF0422 496922 - 496503 - | hypothetical protein CF0423 497780 - 497385 - | hypothetical protein TERM 431 497968 - 497990 + r 78 -7.7 -4.23615 | opp_overlap 497968 GTTTGTATAAAAAAA CCCCGCAAA GTGGA TTTGCGAGG TTTCTTAGCTGTAGT TERM 432 497990 - 497968 - R 100 -9.9 -5.60993 | opp_overlap 497968 GTTTGTATAAAAAAA CCCCGCAAA GTGGA TTTGCGAGG TTTCTTAGCTGTAGT CF0424 498808 - 498023 - | hypothetical protein CF0425 499541 - 499047 - | hypothetical protein CF0426 499872 - 500696 + | hypothetical protein TERM 433 501890 - 501904 + G 86 -10 -4.08216 | CGCCATGAAAAGGGG TAGCGC TGA GCGCTA TTTTCAAGAACATAA imdH 501087 - 502163 + | inosine-5'-monophosphate dehydrogenase TERM 434 502485 - 502498 + G 78 -3.9 -5.24129 | AGAGAATGAGTTTGG CTATA CCCC TATAG TTTTTTATCCGGGAA guaA 502180 - 503718 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 435 504200 - 504188 - g 71 -6.3 -4.23486 | opp_overlap 504187, overlap 504185 AATTATTTAAAACAA TGTCT AAA AGACA ATATCATTTACACTG CF0429 503741 - 505120 + | hypothetical protein TERM 436 505260 - 505288 + F 93 -8.2 -5.49568 | overlap 505262 TAAGCAATAGCTTGT GCCTGGAGTTTG TGTAT TAAACTCCAGTC TTTTTATTTTGAATT TERM 437 505262 - 505286 + F 93 -9.4 -4.3613 | overlap 505260 AGCAATAGCTTGTGC CTGGAGTTTG TGTAT TAAACTCCAG TCTTTTTATTTTGAA CF0430 505331 - 506125 + | hypothetical protein CF0431 506260 - 507144 + | hypothetical protein TERM 438 507261 - 507284 + F 70 -8.3 -3.19653 | opp_overlap 507265, overlap 507265 ATAGCTTTATTGGGA TTAATCCGT GTCTAA ACGGATTAA TTAATAGAATTATCG CF0432 507356 - 508231 + | hypothetical protein kprS 509240 - 508335 - | ribose-phosphate pyrophosphokinase TERM 439 508503 - 508493 - G 72 -3.2 -5.1356 | CGTCACCAACAAAAA GACC ATG AGTC ACCGTAGCAATAATT TERM 440 508507 - 508529 + g 70 -3.4 -4.88407 | overlap 508510 AGACCATGAGTCACC GTAGCAATAA TTT TTTTTGCTCC TTTTTGCTTACATAA TERM 441 508644 - 508661 + g 70 -2.7 -5.14563 | TTTCATGCGTACTTC GAACG AATTTAGA CGTTC TTTTTTAATCACAGC TERM 442 508791 - 508767 - G 90 -13.1 -2.87132 | opp_overlap 508767 GTCTTGGCTTATATA GCTTTTTATAG TGT CTATAAAAAGC TGTTGGCAGTGCAAG TERM 443 508767 - 508791 + g 91 -13.1 -3.04144 | opp_overlap 508767 GTCTTGGCTTATATA GCTTTTTATAG TGT CTATAAAAAGC TGTTGGCAGTGCAAG kynU 510514 - 509237 - | kynureninase trpA 511299 - 510526 - | tryptophan synthase subunit alpha trpB1 512467 - 511292 - | tryptophan synthase subunit beta TERM 444 511489 - 511479 - G 75 -5.4 -4.82212 | opp_overlap 511479 511484 GAAAGAAGAAAGAAA GCTT CTA AAGC AGCTTTGTCTGTTGC TERM 445 512281 - 512291 + g 74 -4 -5.01042 | overlap 512278 GCGGTCCATGGATTG CTTT GGC AAAG TTTTTAATTTCGGTT trpF 513084 - 512464 - | N-(5'-phosphoribosyl)anthranilate isomerase trpC 513895 - 513074 - | indole-3-glycerol phosphate synthase trpD 514917 - 513886 - | anthranilate phosphoribosyltransferase TERM 446 514409 - 514422 + g 76 -6.7 -4.34402 | ATATTAAATGTGGAA GGGAT TTTC ATCCC TTTTCGTATAGGAGC TERM 447 515089 - 515068 - R 77 -5.1 -5.20222 | overlap 515072 AGGAAATAAAGAAAA TTATTGGGC GAAT GCCCACCAA AGAGAAAAGAAGAAG trpR 515479 - 515174 - | Trp operon repressor CF0441 517290 - 515536 - | hypothetical protein TERM 448 516559 - 516549 - G 77 -8.2 -4.17316 | opp_overlap 516553 ATCCGGGTAAAATAA GGCC TTC GGCC CCAGCGGAATATCCT TERM 449 516829 - 516814 - G 87 -3.2 -5.71983 | TGAATGAGAAAAAAA GGAGTT TAAA ACCTCC AATAAAGCAACGCAT TERM 450 517346 - 517326 - R 83 -6.1 -5.13648 | opp_overlap 517326 517330 CAAACATAAACAAAA GAAATGGCC CTC AGCCATATC TCTGATGCAAATTCA TERM 451 517382 - 517370 - R 70 -4.1 -4.68528 | AAATTCAAAAAACAA TCCCT AAA AGAGA AAAATAGACAGGAGA lifA 527733 - 517837 - | adherence factor TERM 452 518050 - 518065 + g 71 -7.6 -3.83744 | TTCATCTATTTTCTT CACTGT GAGA ACAGTG TCTTTATTTACATCA TERM 453 523119 - 523137 + g 71 -3.8 -4.88918 | overlap 523121 CGTCAGACCAAGTTA GTGGTAGA CGT TCTATCTC TTTTGTTTGAAATAG TERM 454 524064 - 524078 + g 82 -6.4 -4.96762 | opp_overlap 524064 CTGCTTCATCATAAT CTTCTC CCA GAGAGG TTTTTATAATGTCTA TERM 455 527999 - 527983 - H 73 -8.1 -3.57867 | opp_overlap 527982 527980 527983 527985 TAATAAAAAACTTAA GAGATAT TTA ATATCTC ATGTTTTAATATAAG TERM 456 528099 - 528088 - H 89 -3 -5.86061 | TGTTATTAAAAAAAA TACA ATAC TGTA GTAGCCGTAGTCATT TERM 457 528193 - 528203 + G 70 -8.2 -3.66654 | TTTAATCCCCGCTTA GGGC GCT GCCC TTTACCGTTAGACTC TERM 458 529005 - 528989 - g 79 -5.1 -5.06052 | TTAAAAAATACAAAA GAGAAGC CAA GATTCTC ATTAATAAAATCACT TERM 459 530071 - 530033 - g 73 -6.8 -4.27211 | opp_overlap 530035, overlap 530035 GTGAAAGAAAGGAAA GAGCAGTATTTACTTCAG GGG CTAACGTAAATACAGCTT GGTTTACCTTAGAAG TERM 460 530069 - 530035 - g 79 -9.4 -3.72091 | opp_overlap 530035, overlap 530033 GAAAGAAAGGAAAGA GCAGTATTTACTTCAG GGG CTAACGTAAATACAGC TTGGTTTACCTTAGA pplD2 528133 - 530574 + | phospholipase D endonuclease CF0444 530654 - 530854 + | hypothetical protein mac 530829 - 531329 + | MAC/perforin family protein trpB2 531504 - 531313 - | tryptophan synthase beta chain trpB3 531666 - 531544 - | tryptophan synthase beta chain TERM 461 532486 - 532476 - g 72 -4.6 -4.76213 | AGAAAGTGAAGAAAA GCCC TCA AGGC GATCCTTCCGATTTT TERM 462 532654 - 532630 - g 78 -2.7 -5.49809 | opp_overlap 532631, overlap 532631 TAAATCTCAAAAAAA TGCAGACGGTA CAA TACAGACTGCT ATTCCTCTAGGCCGC CF0448 531944 - 532852 + | hypothetical protein TERM 463 533090 - 533113 + G 70 -5.4 -4.33105 | opp_overlap 533090 533088 AGATATGTGTAAATA TTATCGGAAT CTCT ATTCCCATAA TTTTCGTGGTGCTTG CF0449 532987 - 533292 + | hypothetical protein CF0450 533638 - 534600 + | hypothetical protein CF0451 535062 - 536081 + | hypothetical protein CF0452 537847 - 536183 - | hypothetical protein CF0453 539002 - 537998 - | hypothetical protein TERM 464 539144 - 539116 - R 100 -11.9 -4.49556 | overlap 539119 TTGCGAGCAAAGAAA TAAGTCTAGAGAT AAA ATCTCTAGACGTA TGAAGAATCTTAAAA TERM 465 539141 - 539119 - R 100 -13.6 -4.35958 | overlap 539116 CGAGCAAAGAAATAA GTCTAGAGAT AAA ATCTCTAGAC GTATGAAGAATCTTA accC 540509 - 539154 - | acetyl-CoA carboxylase biotin carboxylase subunit accB 541009 - 540509 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit efp1 541598 - 541041 - | elongation factor P TERM 466 541490 - 541506 + g 70 -8.1 -3.62864 | opp_overlap 541484, overlap 541479 TTAATGAAGCCTTGA TAAAGGT CTC ACCTTTA TTTCCCGTGACTTTA rpe 542280 - 541585 - | ribulose-phosphate 3-epimerase TERM 467 541761 - 541771 + g 73 -6.8 -4.27911 | opp_overlap 541751 AACAAGAATCTTCAA GACC CAT GGTC TTTATTGCCTGTTTT TERM 468 542070 - 542083 + g 71 -6.7 -3.97602 | overlap 542072 AGATCATAGCGTGCA CCTCT AAAA AGAGG TTTGTAGATCTATTG incA1 542659 - 543702 + | inclusion membrane protein TERM 469 543786 - 543806 + F 95 -5.3 -6.30182 | opp_overlap 543786 TTTTTAATCGCAAAA GGCTGGAGG GTT TCTCTTGCC TTTTTTTTTATCTCC CF0459 543838 - 544653 + | hypothetical protein TERM 470 544673 - 544663 - f 70 -4 -4.88795 | ATTTAATAAAATAAA GTTT ATA AAAC TTGGCGTCAAAAAGC TERM 471 545150 - 545171 + G 73 -5.9 -4.60258 | AGAACTGGATGGACC CCAATATCT ATTC AGAGATTGG TTTCTTATTTGATCA rbn 544730 - 546022 + | tRNA-processing ribonuclease BN CF0461 546019 - 549444 + | hypothetical protein TERM 472 549642 - 549631 - g 76 -4.4 -5.1101 | CTATGATTCAAAAAA CCAT AACT ATGG TGGAAAGGATCCAAG CF0462 549558 - 550922 + | hypothetical protein TERM 473 550929 - 550955 + T 85 -10.3 -3.45634 | gap 1, opp_overlap 550927 550925, overlap 550930 CGTTATTAAGACAGG C-CACAGCTGTA TTCT TACAGCTGTGTG TTCTAACTATTGTTT TERM 474 550930 - 550953 + T 95 -14 -3.28582 | opp_overlap 550927 550925, overlap 550929 GTTATTAAGACAGGC CACAGCTGTA TTCT TACAGCTGTG TGTTCTAACTATTGT glnQ 551645 - 550962 - | ABC transporter of amino acids glnP 552288 - 551635 - | ABC transporter of amino acids TERM 475 552060 - 552020 - G 72 -10.3 -2.54732 | opp_overlap 552022 552030, overlap 551991 551990 552019 552031 CTTAAAGCTATTAAT CCCGCCATCAACGGCGTTG GAT CCACGCCGATGATTGAAGG TAGCCCGAAATAAAA TERM 476 552049 - 552031 - G 75 -10.2 -3.14881 | opp_overlap 552022 552030, overlap 552020 552019 TAATCCCGCCATCAA CGGCGTTG GAT CCACGCCG ATGATTGAAGGTAGC argR 552778 - 552335 - | transciption factor/arginine operon repressor TERM 477 552717 - 552727 + g 70 -5.4 -4.4784 | ATTTCTTCCTGGGTT GAAG CTC CTTC TTTGTTTAAAATTTC TERM 478 553587 - 553606 + GH 74 -6.4 -4.4017 | AAAAACAATATTGCA GCCTCTTT CCAA AAAGCGGC TTTTATGACAATTGC gcp2 552861 - 553895 + | O-sialoglycoprotein endopeptidase oppA3 553841 - 555433 + | ABC transporter/periplasmic oligopeptide binding lipoprotein component zwf 555639 - 557180 + | glucose-6-phosphate 1-dehydrogenase devB 557198 - 557980 + | 6-phosphogluconolactonase CF0470 559177 - 558032 - | hypothetical protein TERM 479 558620 - 558652 + g 79 -11.3 -2.53995 | AACGGCTTTTGATTT GGCTTTTTCCTGGCT GTC AGCCTGGAAAGAGGC TACATTCAAGTAGAT CF0471 559711 - 559307 - | hypothetical protein CF0472 560258 - 559737 - | hypothetical protein CF0473 560894 - 560337 - | hypothetical protein TERM 480 560408 - 560389 - G 72 -8.6 -3.56558 | overlap 560390 GCAGAAGCTATATAA CCACCCTT TTTA AAGGGTGA GATATGACTATTTTT TERM 481 560407 - 560390 - G 70 -9.9 -2.73453 | overlap 560389 CAGAAGCTATATAAC CACCCTT TTTA AAGGGTG AGATATGACTATTTT TERM 482 560420 - 560437 + g 87 -3.5 -5.84432 | overlap 560422 GTGAGATATGACTAT TTTTAAG AAGG CTTAAGA TTTTTTTCTCTTGTC TERM 483 560696 - 560684 - G 71 -4.8 -4.56597 | GTCTTTCTGGAAAAA GAGG AGCAG CCTC GGATAAGAAGATCCC TERM 484 560859 - 560849 - G 95 -4.6 -5.75342 | TGGTGTCAAAAAAAA CCAG GAC CCGG CTATTAGAATGAAGA adk 561164 - 561805 + | adenylate kinase TERM 485 562086 - 562105 + G 76 -4.4 -5.0133 | gap 1, overlap 562090 ATTTCACCTAACGCT GCAGTCAAA TCT TTTGA-TGC TTTTTTAGAACCCTG TERM 486 562484 - 562496 + G 82 -7.7 -4.55887 | TAGTTTTGGAAGTCT TCCTC CAG GAGGA TTTGTCTTTTTACAA ydhO 561861 - 562712 + | polysaccharide hydrolase-invasin repeat-containing protein TERM 487 562714 - 562701 - T 74 -2.4 -5.42605 | overlap 562702 CCAAGAAAAAGAAAA GTCT TCTTCT AGAC GAAAGACAAACTAGA rpsI 563221 - 562820 - | 30S ribosomal protein S9 rplM 563687 - 563235 - | 50S ribosomal protein L13 CF0478 563849 - 564025 + | hypothetical protein CF0479 564194 - 565468 + | hypothetical protein ycfV 566144 - 565473 - | ABC transporter of lipoproteins abc1 567658 - 566147 - | ABC transporter TERM 488 568829 - 568812 - g 71 -4.1 -5.00616 | opp_overlap 568802, overlap 568815 TCGGGTCTTAAAAAA GATGTTG AGAA CAACGTC TAAAGAGCAAATTCT CF0482 567964 - 569346 + | hypothetical protein CF0483 570192 - 569374 - | hypothetical protein CF0484 571055 - 570198 - | hypothetical protein CF0485 571885 - 571058 - | hypothetical protein secA2 572721 - 572236 - | preprotein translocase secA subunit ydaO 572849 - 573592 + | PP-loop type ATPase surE 573699 - 574523 + | stationary phase survival protein SurE TERM 489 574655 - 574667 + F 72 -2.7 -5.24531 | AAGTTGGGTGGTGTT TTCTT TAA AAGGA TTTTTTATAAAAGGT TERM 490 575213 - 575197 - f 75 -10.1 -2.62933 | CAATTGGTTAGAGCA CCGCCCT GTC AAGGCGG AAGTTGCGGGTTCAA CF0489 575266 - 576159 + | hypothetical protein ubiD 576734 - 576156 - | aromatic acid decarboxylase ubiA 577641 - 576751 - | prenyltransferase TERM 491 576986 - 576999 + g 74 -5.3 -4.72272 | opp_overlap 576976 ATTAAGCATGCCGAA GCAAT GCGA ATTGC TTTTTCCTCACCAAA TERM 492 577086 - 577109 + g 75 -10.4 -3.15544 | opp_overlap 577077 577082 577085, overlap 577088 CATAAATAATATCAT TAGCAGCAAT GATC ATTGCTGCTG TTAGTCCCCATAAAG TERM 493 577088 - 577107 + g 79 -10.8 -3.14051 | opp_overlap 577082 577085, overlap 577086 TAAATAATATCATTA GCAGCAAT GATC ATTGCTGC TGTTAGTCCCCATAA CF0492 577832 - 578545 + | hypothetical protein TERM 494 578591 - 578627 + F 77 -6.1 -4.74767 | overlap 578594 578596 ACAGATTTCTCCCTC TATTTCTCTTTTTTTTA AAT TAAAAAAAAGAGTGTTA TTTTGTATTCGTTAT TERM 495 578594 - 578624 + F 81 -7.8 -4.45115 | overlap 578591 578596 GATTTCTCCCTCTAT TTCTCTTTTTTTTA AAT TAAAAAAAAGAGTG TTATTTTGTATTCGT TERM 496 578596 - 578622 + F 95 -12.6 -3.81271 | overlap 578594 578591 TTTCTCCCTCTATTT CTCTTTTTTTTA AAT TAAAAAAAAGAG TGTTATTTTGTATTC TERM 497 579222 - 579187 - g 71 -7 -4.11394 | gap 1, opp_overlap 579190, overlap 579190 ATTGTATGGGGAAAA CAAGAACTATTATCGCC ATG GGAGA-AATTGTTCTTG GTATAGGTTGTATAG CF0493 578745 - 579884 + | hypothetical protein zip 580136 - 581221 + | synaptonemal complex protein dpp 582212 - 581238 - | zinc-dependent dipeptidase ywlC 583110 - 582241 - | translation factor SUA5 family protein TERM 498 582537 - 582516 - G 82 -11.7 -3.01712 | opp_overlap 582515 582514 582511, overlap 582536 TCTTTTCTCCTAAGA CCTCTTCAA TATG TTGAAGAGG AATTATTCCTTCACG TERM 499 582676 - 582644 - G 88 -8.6 -4.82901 | gap 1, opp_overlap 582651 TCTTCTTTAGAAAAA TCC-TCAATTACCTC TTCA GAGGTAATTGCTGGA GGAAAACTAGAAATG TERM 500 582776 - 582793 + g 71 -4.1 -4.91109 | CTGAATCCCAATTTT TCCTGGG TAAA TCTAGGA TTTTTATGATCAACA lyp 583411 - 583644 + | lysophospholipase esterase ses 583548 - 584132 + | serine esterase esterase dnaX1 584996 - 584124 - | DNA polymerase III subunit delta' tdk 585610 - 584987 - | thymidylate kinase gyrA2 588116 - 585624 - | DNA gyrase subunit A TERM 501 587330 - 587352 + g 80 -11.4 -2.90508 | overlap 587327 587318 CATTGTAGGGCATCT CTGTGAGAAT AAT ATTCTCACGG TGCTTATCTGCATTC gyrB 590552 - 588132 - | DNA gyrase subunit B TERM 502 589339 - 589352 + g 83 -3.1 -5.58074 | overlap 589335 GCACTCTTGCGTAGA GTTAG CTCT CTAGC TTTTTTTGCTGCTTC TERM 503 590256 - 590279 + g 76 -3.1 -5.23016 | CGTAAGAACAACTTC CAGGGCAGA AACATC TCTACCTTG TTTTTTGGATTCTTT CF0503 590906 - 590556 - | hypothetical protein CF0504 591560 - 591096 - | hypothetical protein TERM 504 591228 - 591242 + g 73 -5.8 -4.64676 | TTTTTTTAAAACGTC CAAATT AAT AATTTG TTTTCTTGGCAGTCG omp05 592634 - 591831 - | outer membrane protein TERM 505 592401 - 592387 - G 72 -3.6 -5.02074 | overlap 592389 TCATCTTTTAAAAAA TCTTCA TGT TGAAAA TAGTTTGCTTCTATT app 593296 - 592631 - | ABC transporter TERM 506 593141 - 593131 - G 73 -6.8 -4.17263 | opp_overlap 593136 593139 TAAGAATGACAGAAA CCAC CGA GTGG AGACTCTTCATAGGT dppF2 594333 - 593311 - | ABC transporter of dipeptides CF0508 596378 - 594492 - | hypothetical protein TERM 507 595397 - 595381 - G 70 -3.6 -4.88407 | overlap 595382 TCATGCAACCAAAAA GCTCCC CAAGT GGGAGA AGAAAATATTGCTTT TERM 508 595777 - 595763 - G 89 -10 -4.24397 | AGAATTCAAGAGAAA GAGGAG TAT CTCCTC TGGAGACTGCCTCAG TERM 509 596647 - 596660 + G 71 -3.9 -4.93318 | opp_overlap 596647 CCTCCCCTCACCAGA CTTTA TCGA TAAAG TTTTTGTCAATTCTG TERM 510 597027 - 597047 + G 75 -5.4 -4.80487 | CTTACGATATGGGTG CTGTTGCT GTCGG AGCCACAG TTTATTTTGGTTCTG dhnA 596546 - 597595 + | fructose-bisphosphate aldolase TERM 511 597750 - 597762 + G 70 -5.5 -4.46926 | TTTTCTTTTATGCTC TAGCC GTG GGCTG TTTTATGATCCCCTA TERM 512 598784 - 598772 - g 76 -9.1 -3.72695 | ATTTTGCGTATTAAA GAGCC AAA GGCTC AACGTCTCTATTCTG xasA 597614 - 599014 + | amino acid antiporter TERM 513 599072 - 599028 - T 100 -11.7 -4.53705 | opp_overlap 599028 599030 599035, overlap 599030 599061 AAGCCTGATAGAAAA CATCGAAGCAGTTCCTTAAAA ATC TTTTAAGAAGCTGCTTTGATA TTCTTCAAAAAAGCA TERM 514 599028 - 599072 + T 90 -11.7 -3.61398 | opp_overlap 599028 599030 599061, overlap 599030 599035 AAGCCTGATAGAAAA CATCGAAGCAGTTCCTTAAAA ATC TTTTAAGAAGCTGCTTTGATA TTCTTCAAAAAAGCA TERM 515 599070 - 599030 - T 91 -12.1 -3.87627 | opp_overlap 599028 599030 599035, overlap 599028 599061 GCCTGATAGAAAACA TCGAAGCAGTTCCTTAAAA ATC TTTTAAGAAGCTGCTTTGA TATTCTTCAAAAAAG TERM 516 599030 - 599070 + T 100 -14.3 -3.38812 | opp_overlap 599030 599028 599061, overlap 599028 599035 GCCTGATAGAAAACA TCGAAGCAGTTCCTTAAAA ATC TTTTAAGAAGCTGCTTTGA TATTCTTCAAAAAAG TERM 517 599035 - 599065 + T 93 -10.6 -4.01135 | opp_overlap 599030 599028 599061, overlap 599030 599028 ATAGAAAACATCGAA GCAGTTCCTTAAAA ATC TTTTAAGAAGCTGC TTTGATATTCTTCAA mgtE 600673 - 599198 - | Mg++ transporter TERM 518 599442 - 599425 - GT 75 -2.7 -5.24129 | CCCCTCCAGAAAAAA GATTCAT TCCC AAGAATC CCATAAGATAAACAA TERM 519 600175 - 600161 - GT 72 -4.3 -4.70626 | opp_overlap 600161, overlap 600153 TAAGAAGGCGAAAAA CTCAT TCGTC ATGAG TCTTCCAGCAGTATT CF0512 602769 - 600637 - | hypothetical protein CF0513 604205 - 603045 - | hypothetical protein TERM 520 604212 - 604222 + H 76 -4 -5.34857 | ACAAGACATGTTACA CTTT TAA AAAG TTTTATTTTATTTCA aaaT 604310 - 605536 + | proton:sodium-glutamate symport protein sdt 605536 - 607017 + | sodium-dependent transporter incB 607102 - 607698 + | inclusion membrane protein incC 607747 - 608298 + | inclusion membrane protein TERM 521 609883 - 609861 - g 85 -9.2 -4.29106 | overlap 609862 TCCCATATGAATAAA CTTAGCCTGC CCA GCAAGCTAAA AACTATGGAAATGTT TERM 522 609882 - 609862 - g 75 -10.5 -3.16982 | overlap 609861 CCCATATGAATAAAC TTAGCCTGC CCA GCAAGCTAA AAACTATGGAAATGT TERM 523 611026 - 611003 - g 70 -9 -3.11103 | opp_overlap 611003, overlap 610994 AAAAGAGTTATTGAA TATGATGGAA AACT CTCCATCATA TTTAAGTAAACTTAC TERM 524 611003 - 611026 + G 73 -8.3 -3.66874 | opp_overlap 611003 610994 AAAAGAGTTATTGAA TATGATGGA AAACTC TCCATCATA TTTAAGTAAACTTAC CF0518 608403 - 611180 + | hypothetical protein TERM 525 611459 - 611442 - g 76 -7.1 -4.30719 | GTTTTGGAGAAGAAA GCTTATT CAGC AATAAGC ATCGAGAATATAACG cpkR 611195 - 611614 + | cAMP-dependent protein kinase regulatory chain acpP 611964 - 611728 - | acyl carrier protein fabG 612801 - 612055 - | 3-ketoacyl-(acyl-carrier-protein) reductase fabD 613730 - 612804 - | malonyl acyl carrier transcyclase fabH 614739 - 613738 - | 3-oxoacyl-(acyl carrier protein) synthase III recR 614869 - 615471 + | recombination protein RecR TERM 526 617480 - 617455 - g 71 -6.2 -4.29977 | AAATAACCCAAGAAA TCCCACTACA GGAGTA CGTAGTGGAA TAAACTTCGAAGTTT omp06 615647 - 618025 + | outer membrane protein omp07 618133 - 618672 + | outer membrane protein/ompH lpxD 618700 - 619779 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase CF0528 620816 - 619785 - | hypothetical protein TERM 527 620335 - 620316 - G 86 -7.2 -5.03227 | ATATGATAAATAAAA CTGTAAAC TATG GCTTACAG AGCATCCTAAAAGTA TERM 528 620677 - 620691 + g 85 -2.9 -5.86332 | GCAACAACCCTTTTA GTTAT AGTTA ATAAC TTTTTTTTAAGTTCA pdhA 620984 - 622009 + | pyruvate dehydrogenase E1 alpha chain pdhB 622002 - 622988 + | pyruvate dehydrogenase E1 beta chain TERM 529 623981 - 623966 - g 79 -3.2 -5.38054 | overlap 623967 CCGCAGAAATAAAAA GCTTAG CATC CAAAGC TAAGTCTCAATCTTT pdhC 622993 - 624279 + | branched-chain alpha-keto acid dehydrogenase subunit E2 glgP 626809 - 624359 - | glycogen phosphorylase TERM 530 624562 - 624548 - G 91 -10 -4.65263 | ATCTGCCAAAACAAA GAAGGG GTC CCCTTC ATAAAGCAATCTATG TERM 531 625371 - 625358 - G 70 -8.1 -3.67597 | TGTCTGATCTAACAA CGCGT TTAA ACGCG GATTACATAATGCTA TERM 532 627039 - 627027 - H 70 -4.1 -4.66163 | ATTTTGATGTAAAAA CAGCA ACG TGCTA GATTTTCTAAGTATT CF0533 627073 - 627420 + | hypothetical protein dnaA1 628816 - 627434 - | chromosomal replication initiation protein TERM 533 628848 - 628868 + r 91 -4.1 -5.87688 | overlap 628849 AATAGTTTTCTTATA TCTTTTTTA GTA TAAAAAAGC TTTTTTTTCAGTTGT TERM 534 628849 - 628867 + r 78 -7.6 -4.10173 | overlap 628848 ATAGTTTTCTTATAT CTTTTTTA GTA TAAAAAAG CTTTTTTTTCAGTTG imp1 631267 - 628883 - | putative inner membrane protein translocase component YidC TERM 535 630079 - 630096 + g 75 -9.9 -3.37622 | TGGACATAATCTCTA CTTCTGG AATT CCAGAAG TTATCCATAAGTCTT TERM 536 630365 - 630353 - G 70 -7.7 -3.67597 | overlap 630338 CCCCCTACGCAATAA GGGAT AAT ATCCC CCTACAGAGTCAGGA TERM 537 631234 - 631224 - G 72 -3.2 -5.07567 | TGACATCCCAAAAAA GCTG CGC CAAC TAAAGAAACAAACAA lgt 632252 - 631362 - | prolipoprotein diacylglyceryl transferase TERM 538 632293 - 632277 - H 83 -2.3 -5.9362 | CAAAATAGAAAAAAA TCTAAAT TCC ATATAGA ATGGCTAAATTGCAC TERM 539 632472 - 632495 + G 89 -6.8 -5.29445 | gap 1 GCTATGGGAGCATGG GTGGTAGCTTC TTT GAAG-TACCGC TTTTTATTGTTAAAA CF0537 632322 - 632768 + | hypothetical protein TERM 540 633123 - 633142 + G 81 -12.2 -2.85351 | opp_overlap 633106 633104 633103 633122 CATAGCCGCGAATAC GCTACAGC CATG GCTGTAGC TCTAGTCTAAAAAAC acpS 632784 - 633152 + | 4'-phosphopantetheinyl transferase trxB 634079 - 633144 - | thioredoxin reductase TERM 541 635630 - 635616 - g 85 -2.8 -5.77856 | AAGAAAGTAAAAAAA TCACTC TTG GAGTCA AACAACTAAGTTCCA TERM 542 635687 - 635670 - g 85 -5.5 -5.22943 | ATGAAATTGAAAAAA TGTTCCC CACA GGGAGCA ACATCTCTGGTGTGG TERM 543 635896 - 635873 - g 75 -2.6 -5.31275 | gap 1, opp_overlap 635881 CCTGATCACAAAAAA GTATCTCTTTC TGT AAAAGA-ATAC CTTGCTGACAAACAA rpsA 634247 - 635992 + | 30S ribosomal protein S1 nusA 636085 - 637389 + | transcription elongation factor NusA infB 637346 - 639991 + | translation initiation factor IF-2 TERM 544 640082 - 640070 - g 71 -6.3 -4.14511 | AATGTGATCTTAAAA GATGT AAA ACATC CTAAAATTTCCAATC rbfA 639998 - 640360 + | ribosome-binding factor A truB 640400 - 641107 + | tRNA pseudouridine synthase B ribF 641091 - 642005 + | bifunctional riboflavin kinase/FMN adenylyltransferase ychF 643077 - 641983 - | translation-associated GTPase TERM 545 642451 - 642478 + g 77 -8.6 -3.92324 | gap 1, overlap 642466 TTCTAAAGAATCCTC GCCTATG-TTTGC TAT GTAAAGCATAGGC TTTGCTGTTAAAAAG TERM 546 643167 - 643128 - H 100 -10.8 -4.21974 | TTAGCAGGCAAGAAA TCCCACAAACATTAGAGT CATT ACCCCTACGCTTGTGGGA GTGTACCGAATTCTT TERM 547 643846 - 643836 - g 78 -4 -5.29846 | AACCTCAAACAAAAA TTCA AGA TGAA GACTTTGATTGAATT yscU 643443 - 644525 + | type III secretion system protein TERM 548 645536 - 645526 - g 81 -5.4 -5.06414 | TCTCGCTAAGAAAAA TAGC ACA GCTA AAAAGGGGGCTTCCG TERM 549 645955 - 645934 - g 74 -4.3 -4.88736 | opp_overlap 645934 CATTACGTATAAAAA TGCTGCAGG CTTA CCTTCTGCA TGGGTTAGTGAGGAT lcrD 644525 - 646654 + | type III secretory flagellar biosynthesis TERM 550 646883 - 646870 - g 84 -2.4 -5.86965 | ACGCACCAAAAAAAA GGAA GAAAAA TTCC AAACCCTAGAATCTA lcrE 646682 - 647878 + | low calcium response protein E sycE 647894 - 648334 + | chaperone for secretion TERM 551 648462 - 648477 + G 74 -9 -3.58522 | overlap 648460 GGAAAATACTGGGAA CCATGC CAAA GCATGG TATTTGTACTCCCTT TERM 552 649551 - 649523 - g 73 -6.7 -4.26903 | opp_overlap 649526, overlap 649526 CGTACTTTAGTAAAA CTAGGAATATGTG GAA CACGCATTCCTCG TTGGGAGCGCAACTG malQ 648389 - 649981 + | 4-alpha-glucanotransferase rpmB 650157 - 650426 + | 50S ribosomal protein L28 oxr2 650452 - 652188 + | oxidoreductase TERM 553 653155 - 653142 - g 73 -2.3 -5.27399 | overlap 653144 TAATAGATCAAAAAA TCCTG ATAG CTGGA TCAGTAAACTGGTCG pplD1 652295 - 653350 + | phospholipase D CF0555 653832 - 653347 - | hypothetical protein CF0556 655588 - 653843 - | hypothetical protein TERM 554 654075 - 654097 + g 90 -9.8 -4.3767 | opp_overlap 654075 TATTGATAAATCAAA GGATCTGGAG GTG CTCCAGGACC TTTCTTATCCTCTAC TERM 555 654097 - 654075 - G 76 -7.6 -4.15066 | opp_overlap 654075 TATTGATAAATCAAA GGATCTGGAG GTG CTCCAGGACC TTTCTTATCCTCTAC TERM 556 654584 - 654569 - G 72 -10.4 -2.65354 | overlap 654566 654565 TCCAGCCCAAACGGA TGCCCC TATA GGGGCA TAAACAGAAGCAGAA TERM 557 655732 - 655711 - R 100 -14.5 -5.82388 | AAATGGCAAAAAAAA CGCAAGGTG GCGG CACCTTGCG AAAAAAACTAGGATA ltuB 656247 - 655957 - | late transcription unit B protein TERM 558 656205 - 656216 + g 80 -4.4 -5.28281 | TTTTTTGAATCAACC GAGA CAAA TCTC TTTTATTTCTTTTCT mreD 656421 - 656969 + | cell division related rod shape-determining membrane protein folD 656960 - 657823 + | bifunctional protein yojL 657793 - 658737 + | thiamine biosynthesis lipoprotein apbE precursor smpB 659170 - 658718 - | SsrA-binding protein TERM 559 659359 - 659343 - H 71 -8.7 -3.05816 | opp_overlap 659342 659351, overlap 659345 GGAGGCTCCAGCGAA GAGATCC CGA GGATCCC CCTATTCTCTTAGGG dnaN 659413 - 660513 + | DNA polymerase III subunit beta TERM 560 660849 - 660835 - g 70 -8.6 -3.44146 | opp_overlap 660832 660835 660837 CCCTGTCACAATTAA TAGGCA TGG TGCCTA TAGTTCTATTTTCCT recF 660513 - 661616 + | recombination protein F omp08 661727 - 662656 + | outer membrane protein yaeL 664520 - 662658 - | membrane-associated Zn-dependent proteases TERM 561 664196 - 664180 - G 86 -8.1 -4.89562 | CCAAAAGCAACAAAA GCTAATA AAA TATTAGC TATAGGACCTGCGGC yaeM 665672 - 664533 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 562 664714 - 664727 + g 72 -3.1 -5.04249 | gap 1, opp_overlap 664714, overlap 664714 GCAGCATTAAAAAAT GG-TCC CGA GGATCC TTTATTTTTTAACAC ytgD 666696 - 665713 - | ABC transporter of metals TERM 563 665947 - 665937 - G 76 -3.2 -5.32699 | TCAAAGACCAAAAAA GCAT TCC ACGC ACAGAAACAACAAAA TERM 564 666495 - 666509 + g 79 -5.7 -4.87803 | opp_overlap 666491 666494 TATGAGAAACAGCAT TGGCA TACAT TGCCA TTTTCTTTAAAACTA ytgC 668042 - 666693 - | ABC transporter of metals TERM 565 666978 - 666964 - G 70 -2.8 -5.02074 | overlap 666965 CTATGCTTTAAAAAA CCCTGA CGC TCAAGA AGCCAAAGTCTAAAT TERM 566 667794 - 667781 - G 87 -5.3 -5.40072 | opp_overlap 667760 TTTTTTCTAAAAAAA CTATG ATTC CATAG CCTAAAATAGCTGCA ytgB1 668822 - 668043 - | ABC transporter of metals CF0571 669780 - 668815 - | hypothetical protein TERM 567 669832 - 669822 - gH 70 -3.2 -4.87052 | GAGAAATTAATAAAA GTCG GAA CAAC GAAAGGCATAAGGTA adhS1 669768 - 670055 + | ABC transporter/periplasmic Mn/Zn-binding protein TERM 568 670534 - 670518 - g 71 -6.5 -4.30014 | GCCATTAATCCAAAA CCTCGAG CAC CTAGAGG GTCTAAAAAACGAAG CF0572 670281 - 670784 + | hypothetical protein TERM 569 671546 - 671534 - g 74 -6.3 -4.39989 | ATGAAATTACCAAAA TTAGC GAA GCTAA ACGTTTCTATGCCTT adt1 671002 - 672594 + | ADP/ATP translocase TERM 570 672623 - 672646 + T 100 -11.8 -6.17292 | opp_overlap 672623 ATCTTATAGTAGAAA TCCTCACTTG GAAA CAGGTGAGGA TTTTTTTTTGCCTTT TERM 571 672646 - 672623 - T 87 -9.6 -4.01888 | opp_overlap 672623 ATCTTATAGTAGAAA TCCTCACTTG GAAA CAGGTGAGGA TTTTTTTTTGCCTTT CF0574 673993 - 672674 - | hypothetical protein TERM 572 673198 - 673234 + g 76 -4.6 -5.04222 | gap 1, opp_overlap 673200, overlap 673200 CCTGGTGATCCCAAG TATTATTCCTGGCGTGA GTCA TCAAG-CAGGAATAATC TTTTTCATTTAATTC TERM 573 673200 - 673232 + g 73 -7.2 -4.12375 | gap 1, opp_overlap 673200, overlap 673198 TGGTGATCCCAAGTA TTATTCCTGGCGTGA GTCA TCAAG-CAGGAATAA TCTTTTTCATTTAAT TERM 574 674804 - 674816 + G 70 -3.5 -4.87893 | opp_overlap 674804 CCTCAAGAAACTGAA TTAAA AGC TTTAA TTTTTGATTCCCATT TERM 575 675546 - 675534 - g 73 -5.5 -4.59773 | overlap 675535 GTGTATGCTTAAAAA CCGAG ATG CTCGA TCAACATAGGCTAGT TERM 576 675618 - 675642 + G 73 -5.7 -4.53685 | opp_overlap 675591 675620 675623, overlap 675620 TTAATGACAAGTTAA AATCAGTAACC AAG GGTTACGGATC TTTTGATTATCGTTT TERM 577 675620 - 675640 + G 77 -8.3 -3.85899 | opp_overlap 675591 675620 675623, overlap 675618 AATGACAAGTTAAAA TCAGTAACC AAG GGTTACGGA TCTTTTGATTATCGT TERM 578 675640 - 675620 - g 85 -8.3 -4.33754 | opp_overlap 675618 675620, overlap 675591 675623 AATGACAAGTTAAAA TCAGTAACC AAG GGTTACGGA TCTTTTGATTATCGT TERM 579 675996 - 675974 - g 83 -9.2 -4.01158 | opp_overlap 675970 AAGCGTATGAAAGAA TTTGGGAAAG TCT CTATCCCAAA TACAGCTTTTATTGA lepA 674222 - 676030 + | GTP-binding protein LepA TERM 580 676166 - 676151 - T 84 -4 -5.60993 | CCGGGGAGAAAAAAA GGATAT CGAA ATACCC CCAAAGAAATACCTA gnd 677662 - 676217 - | 6-phosphogluconate dehydrogenase tyrS 678962 - 677679 - | tyrosyl-tRNA synthetase TERM 581 678223 - 678204 - G 72 -9.4 -2.9796 | overlap 678214 CAACTCATAAGGAGA GGTTAGAT TAGG ATCTAACC AAATAGTTCCCGTCT TERM 582 679037 - 679055 + r 82 -5.4 -5.26875 | opp_overlap 679026 GAAGTTAATTCAATT TTGATTTA AAA TAGATCAA TTTTTTACTTAAAGG CF0578 679315 - 679064 - | hypothetical protein rpoF 680117 - 679344 - | RNA polymerase sigma factor sigma-28 TERM 583 680105 - 680120 + g 95 -6.2 -5.60689 | AAATGTTTTGCGTAT TTTGTG TTTT CACAAA TTTTTTCTTATGTAA flhA 681975 - 680221 - | type III secretion system protein TERM 584 680732 - 680759 + g 85 -11.4 -3.32294 | opp_overlap 680734, overlap 680757 ATAATTTCGTCAACG GAGATGCCCAAA ATAT TTTGCGCATCTC TTATAAGAGCTTTAA TERM 585 681695 - 681683 - G 82 -6.3 -4.87892 | overlap 681665 CCTGAAGAAAAGAAA TTTCC TAA GGAAA AAATCATAGGAGATG TERM 586 682057 - 682073 + H 70 -8.1 -3.25789 | overlap 682056 AAAACTCTTATGTCC GAAAATC GCT GATTTTC ATTTATGTTTATCTT fer2 682258 - 682533 + | ferredoxin [2Fe-2S] IV TERM 587 682561 - 682601 + F 100 -13 -4.68124 | opp_overlap 682561 TAGAAGAATGAGAAA GATTAAGATATTTACATT TGCAT AGTGTAAATATCTTGATC TTTTCTATCTCTTAA TERM 588 682601 - 682561 - f 85 -8.6 -4.15864 | opp_overlap 682561 TAGAAGAATGAGAAA GATTAAGATATTTACATT TGCAT AGTGTAAATATCTTGATC TTTTCTATCTCTTAA TERM 589 682633 - 682652 + F 87 -2.1 -6.09196 | opp_overlap 682619 682633, overlap 682636 TCAAAAAACAAAAAT TCCCC CCTCTTCTCT GGGGA TTTTTTTCTTTTGCG lam 682967 - 683968 + | ATPase associated with chromosome architecture TERM 590 683993 - 684037 + F 100 -13.8 -3.90588 | opp_overlap 683988 683995, overlap 683994 TACATTAAAATAGGA AAGCTTGGCGCATAAAATAA GTGTA TTATTTTATGCGCCAGGCAA TTTGCTTCAAACCTC TERM 591 683994 - 684036 + F 100 -17.3 -2.94032 | opp_overlap 683988 683995, overlap 683993 ACATTAAAATAGGAA AGCTTGGCGCATAAAATAA GTGTA TTATTTTATGCGCCAGGCA ATTTGCTTCAAACCT TERM 592 684035 - 683995 - f 100 -18.6 -4.09285 | opp_overlap 683994 683993, overlap 683988 CATTAAAATAGGAAA GCTTGGCGCATAAAATAA GTGTA TTATTTTATGCGCCAGGC AATTTGCTTCAAACC CF0583 684482 - 685501 + | hypothetical protein TERM 593 685571 - 685546 - f 73 -9.1 -2.88544 | gap 1 TCCCACCCTTAGAGA TTGGTCCGAAGA AAA TCC-CGGACCAA TCTAAACCCATAAAC TERM 594 685961 - 685912 - g 85 -6.6 -5.12971 | opp_overlap 685918, overlap 685913 AACATTCAATAAAAA TGCAATCTATGACAACAACA-CCG ACCT CGGATGTTGATGCCACAG-TTGCT CAGATTTGCTCCTTA TERM 595 685960 - 685913 - g 80 -10.1 -3.66156 | opp_overlap 685918, overlap 685912 ACATTCAATAAAAAT GCAATCTATGACAACAACA-CCG ACCT CGGATGTTGATGCCACAG-TTGC TCAGATTTGCTCCTT TERM 596 686796 - 686779 - g 70 -2.7 -5.10601 | gap 1, opp_overlap 686781 686782, overlap 686773 686782 AGAAAATTACAAAAA CA-ACCCC ATG GGGATCTG TTTATGGAGTATTTA TERM 597 686911 - 686898 - g 76 -4.5 -5.10029 | opp_overlap 686905 ACTAACGGGAAAAAA GATGC CACT GCACC CGAAGGCGTAGTTAT gcpE 685815 - 687635 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 598 688371 - 688352 - g 76 -2.1 -5.46657 | CACTCCAATAAAAAA GAACAAC GTTACT GCCGTTC TTCTTCTTCCTAGAG CF0585 687648 - 688391 + | hypothetical protein sucB1 689491 - 688394 - | dihydrolipoamide acetyltransferase kgd 692214 - 689488 - | alpha-ketoglutarate decarboxylase TERM 599 690850 - 690864 + g 85 -4.2 -5.5353 | ATACTTCCTATAAAT CTCACG AAT TGTGGG TTTTTTCTTAATCTC TERM 600 692122 - 692108 - G 78 -2.8 -5.41143 | overlap 692110 TACCCTTCAAAAAAA TACTTC CAT GAAGAA TCCAGGGTTTCATGA TERM 601 692120 - 692110 - G 70 -5.4 -4.34482 | overlap 692108 CCCTTCAAAAAAATA CTTC CAT GAAG AATCCAGGGTTTCAT TERM 602 692513 - 692498 - g 76 -3.3 -5.18371 | CTTTAGAAAACAAAA TCCTT GAGGAG AAGGA GCGTTTACAACTACT CF0588 692368 - 692814 + | hypothetical protein TERM 603 693073 - 693051 - g 74 -6.3 -4.36063 | ATAATATCATTAAAA TTCTTGCGC CTCAT GCTCAAGAA ATCACTCTAGAGGCT hemN2 692798 - 693925 + | coproporphyrinogen III oxidase TERM 604 694347 - 694323 - g 86 -9.3 -4.3453 | opp_overlap 694323 AATTCCAAATACAAA TGGAGCCAACG GCA CATTGGATCCA TCATCTGCAGCGACT CF0590 693985 - 695472 + | hypothetical protein TERM 605 695510 - 695485 - T 100 -10.6 -4.18494 | opp_overlap 695470 695485 695488 695508, overlap 695488 TAGTTTTATCTAAAA TAAGGCTAAG TTTATT CTTAGCCTTA TTCCATAATTTAATA TERM 606 695485 - 695510 + T 83 -10.6 -3.17054 | opp_overlap 695485 695488, overlap 695470 695488 695508 TAGTTTTATCTAAAA TAAGGCTAAG TTTATT CTTAGCCTTA TTCCATAATTTAATA TERM 607 695488 - 695507 + T 73 -7.9 -3.71924 | opp_overlap 695485 695488, overlap 695470 695485 TTTTATCTAAAATAA GGCTAAG TTTATT CTTAGCC TTATTCCATAATTTA TERM 608 695507 - 695488 - T 78 -7.9 -4.21812 | opp_overlap 695470 695488 695485, overlap 695485 TTTTATCTAAAATAA GGCTAAG TTTATT CTTAGCC TTATTCCATAATTTA awa1 696809 - 695520 - | cell wall associated hydrolases TERM 609 696879 - 696869 - H 86 -2.6 -5.94214 | overlap 696861 696870 AATAGAATAAAAAAA TTTT TTT AAAA ACAAAAACTAAATTA CF0592 696965 - 697441 + | hypothetical protein rrm6 698210 - 697500 - | tRNA/rRNA methyltransferase CF0594 699145 - 698207 - | hypothetical protein TERM 610 698560 - 698574 + g 70 -5.7 -4.32046 | opp_overlap 698559 CGAAACTTTCAATAT CGCTA TATTC TAGCG TTTGCTTTTTCCCCA TERM 611 698636 - 698650 + g 81 -5.7 -5.1675 | AAGATTATGCATTTC TTCCC CTTGA GGGAA TTTTTTAATAAATGC TERM 612 699276 - 699252 - RH 100 -8 -6.30182 | gap 1 GGAGACAAAAAAAAA CGGTAAG-AGA AGCA TCTTCTTACCG TTCACCATCGCCTAA esp 699921 - 699304 - | eggshell protein p48 TERM 613 699347 - 699362 + gH 71 -6.8 -4.07885 | TGACGCCAGCCATGA GCTGTG CGAA CACGGC TTTTAGAACCACATC TERM 614 699637 - 699651 + Gg 74 -4.2 -5.02074 | overlap 699638 TTTTCTCACAGCAGG CTTGCG AGT CGCAAC TTTTTTAGCAACTGG TERM 615 699870 - 699884 + Gg 75 -5.7 -4.73613 | overlap 699878 TAGCAGGTTTTCGAA CAGCT TTAGT AGCTG TTTTCTTGCTGCTAC hctB 699434 - 699940 + | histone H1-like protein Hc2 TERM 616 700033 - 699996 - TR 80 -6.5 -4.70613 | opp_overlap 699996 AAAACTTTAATAAAA CTCGAATTTATTTTTAA TAAT TTAAAAACAAAAACGAG TTATTAAACAGAAAG pepA 701565 - 700063 - | leucyl aminopeptidase ssb 702080 - 701604 - | single-strand DNA-binding protein TERM 617 702339 - 702293 - R 72 -8.2 -3.36655 | overlap 702309 CCATACACACACCAA GAATGTACTGAGAAAATCACGC TAC GCGCAATCTTATCAATAGATTC AAACTTCCCCCTGGA CF0599 703271 - 702768 - | hypothetical protein glgX 703404 - 705392 + | glycogen hydrolase CF0601 706158 - 705385 - | hypothetical protein ruvB 707210 - 706197 - | Holliday junction DNA helicase B TERM 618 707628 - 707609 - H 75 -7.2 -4.16301 | CACATTACATACAAA GTCCTTCT CTTT AGAAAGAC CGGGTATTTTGCTTC dcd 707811 - 708383 + | deoxycytidine triphosphate deaminase CF0604 708393 - 708722 + | hypothetical protein tlyC1 708732 - 709967 + | hemolysin TERM 619 710009 - 710019 + G 70 -3.2 -4.85918 | ATTTTCTATGTATTG TCCT TCA GGGA TTTTATTCTATGATG TERM 620 710450 - 710439 - g 73 -2.2 -5.24515 | AATAAAGAAAGAAAA GCTG AACT CAAC ATTAAGTCGTGATGA tlyC2 709960 - 711174 + | hemolysin nifS2 712293 - 711178 - | cysteine desulfurase pp2C 713066 - 712317 - | PP2C-like serine/threonine phosphatase TERM 621 712921 - 712904 - G 74 -4.1 -5.01811 | overlap 712906 CCATTAAACTAAAAA TGGCTTC ATGA GAAGCAA CGTCTCCTCCCGAGC CF0609 713359 - 714492 + | hypothetical protein CF0610 714570 - 714932 + | hypothetical protein TERM 622 714959 - 714997 + F 82 -8.9 -3.90738 | opp_overlap 714959 714952 AAATCAAATTGAGAA TAGCAGGGAATCTGAGA TCTTC TCTCCGGCTCCTTGCTA TTTCATGATTCTTTG CF0611 715221 - 715733 + | hypothetical protein TERM 623 715737 - 715755 + T 82 -3.2 -5.75538 | GATATCGACTAGGTT CTTAGA GACACCG TCTAAG TTTTTCTTTTTTGCC TERM 624 715767 - 715785 + T 87 -11.7 -3.22877 | TAAGTTTTTCTTTTT TGCCCGC CCCCA GCGGGCA TTCCCTATTCCTTTA CF0612 716041 - 715790 - | hypothetical protein TERM 625 716656 - 716645 - g 75 -3 -5.21709 | opp_overlap 716645 TGTTAGAGCAAAAAA TATC ACAA GATA TGTCTGGTCAAGACT CF0613 716221 - 716907 + | hypothetical protein CF0614 716911 - 717687 + | hypothetical protein CF0615 718260 - 717874 - | hypothetical protein TERM 626 718179 - 718204 + g 82 -11.9 -2.96611 | opp_overlap 718196 718198, overlap 718193 718193 TAGAATCGAAATCCT GGCTGTCTGTC CAAG GACAGACACCC TCTGTCACCTTTTTT mutY 719374 - 718265 - | adenine/guanine glycosylase rsuC 719421 - 720245 + | ribosomal large subunit pseudouridine synthase C CF0618 722692 - 720242 - | hypothetical protein TERM 627 720867 - 720855 - G 70 -7.7 -3.65902 | GTCATTGTACCTAAA GCACA TGG TGTGC GGTGACCACGTGGCA CF0619 725183 - 722970 - | hypothetical protein TERM 628 724608 - 724624 + g 72 -4.5 -4.71234 | TAACTGAGTGCGCAA TACAGAA GTG TTTTGTA TTTTCTCTTCCGTTT TERM 629 726081 - 726065 - g 79 -5.1 -5.01546 | overlap 726067 AAAGTGATACAAAAA TGCTTGC TTG GGAAGCA GGAAGAAAATGGGGA fabI 725452 - 726351 + | enoyl-(acyl carrier protein) reductase had 727225 - 726338 - | HAD superfamily hydrolase TERM 630 727113 - 727092 - G 73 -2.3 -5.18726 | overlap 727094 727095 TTCGCATAAGAAAAA TACCTTCCC GTAA GGAAAAATA ACTTCCATCCAGAAT CF0622 727599 - 728105 + | hypothetical protein CF0623 728137 - 728610 + | hypothetical protein TERM 631 728862 - 728889 + G 85 -9.2 -4.30448 | opp_overlap 728862 728861 TTTGTGGAAATGAAG CTGTCCTTGTTG CACA CAACAACGACGG TTTTGACTTCCCTTT TERM 632 728932 - 728914 - g 73 -7.4 -4.13767 | opp_overlap 728897 728918 CCCTTTACTTGAAAA GGAATGTC GTC GGCATTCC TTGGAACCTTTAACC TERM 633 729188 - 729177 - g 70 -5.8 -4.35581 | overlap 729168 CTAAAACATTTAAAA TGCC TTTT GGCA AATACAAAGGCAAAC dnaQ1 728621 - 729307 + | DNA polymerase III subunit epsilon CF0625 729304 - 730077 + | hypothetical protein CF0626 730058 - 730720 + | hypothetical protein msbA 732691 - 730724 - | ABC transporter for multidrug TERM 634 731689 - 731677 - GT 89 -9.1 -4.12066 | opp_overlap 731675 CACAAAATACAATAA GCTCC TCG GGAGC AATATTAAACTTATA TERM 635 732598 - 732586 - GT 72 -3.4 -5.08824 | GCCCTAGGGAAAAAA TCTC TGCTT GAGA AGATACGGTTAATCC accA 733631 - 732657 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 636 733744 - 733728 - R 74 -2.3 -5.41143 | opp_overlap 733705 733728 GATTTTTCAAAAAAA CAATAAA CTA TTAATTG CATTTTTCAAAACCA CF0629 734916 - 733738 - | hypothetical protein himD 735347 - 735045 - | DNA-binding protein HU TERM 637 735160 - 735170 + g 79 -5.4 -4.99043 | TTTTTAGGGTTGCGA CCTA CTT TAGG TTTTCTTTCTACAAC ami1 736468 - 735749 - | N-acetylmuramoyl-L-alanine amidase murE 737918 - 736461 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 638 736613 - 736638 + g 79 -5.5 -4.85782 | overlap 736614 CATATGTAATTGCTT GTTTTCTGTCG ATTT CGATAGAAAAA TTTCTTTTTACAAAG TERM 639 736614 - 736637 + g 74 -9 -3.50746 | overlap 736613 ATATGTAATTGCTTG TTTTCTGTCG ATTT CGATAGAAAA ATTTCTTTTTACAAA CF0633 738391 - 738173 - | hypothetical protein ftsI2 740312 - 738363 - | cell division related penicillin-binding protein TERM 640 739733 - 739750 + gr 77 -6.3 -4.60713 | overlap 739734 CTTCTAAGCCACCTG TGGGAAA AGCT TTTCCCG TTTTCTCATCTTTTA CF0635 740586 - 740299 - | hypothetical protein mraW 741479 - 740583 - | S-adenosyl-methyltransferase MraW TERM 641 741795 - 741775 - g 80 -10.5 -3.6682 | overlap 741786 CGCGATGTAGCCAAA CATGCCCAA ATT TTGGACATG ATGCCAAAGCCCTCG ebp07 741652 - 742203 + | hypothetical protein CF0638 742207 - 742638 + | hypothetical protein TERM 642 742671 - 742661 - f 72 -8.2 -3.44848 | opp_overlap 742660, overlap 742659 CTCTCGCATTAAAGA GCGC TTA GCGC CTAGTTTATAATAAT TERM 643 742750 - 742730 - f 83 -7 -4.82901 | overlap 742748 TTTTTTTCAGAAAAA CTATTGAT TGCTT ATCAATAG CAATGGTACATTGGC dnaA 742836 - 744188 + | chromosomal replication initiation protein CF0640 744205 - 744792 + | hypothetical protein CF0641 745354 - 744761 - | hypothetical protein TERM 644 746023 - 746039 + G 74 -5.1 -4.82162 | opp_overlap 746023, overlap 746020 AATATTCTCAATCCA GCCCT ATCGGGA AGGGC TTTTCTATTCTTCTC TERM 645 746294 - 746280 - g 81 -7.2 -4.52589 | opp_overlap 746280 746279 TGTCCCTACACAAAA TGTGAT ACA ATCACA ATTTTCAATATGGAC nqrB 745435 - 746946 + | Na(+)-translocating NADH-quinone reductase subunit B nqrC 746950 - 747909 + | Na(+)-translocating NADH-quinone reductase subunit C TERM 646 748120 - 748135 + G 71 -6.2 -4.16837 | overlap 748099 ACGTATGATTACGCA GCTAAT TATC ATTAGC TTATTTGTAATTGTA nqrD 747896 - 748537 + | Na(+)-translocating NADH-quinone reductase subunit D nqrE 748542 - 749333 + | Na(+)-translocating NADH-quinone reductase subunit E CF0646 749664 - 749338 - | hypothetical protein TERM 647 749462 - 749442 - G 74 -3.9 -5.03713 | overlap 749432 749443 AACAAGCAAAGAAAA TTGCGGTAT ATA ATGCCGCAG GAGTAATTACTTGGG CF0647 749979 - 749683 - | hypothetical protein gcsH 750446 - 750105 - | glycine cleavage system protein H CF0649 752479 - 750446 - | hypothetical protein TERM 648 752556 - 752544 - R 76 -2.7 -5.44198 | opp_overlap 752547 AATAAACAATAAAAA GCTTA GTG TAAAC TATTGATCGGAAAAA pplD3 754068 - 752647 - | phospholipase D proteinase TERM 649 753838 - 753821 - G 72 -9.9 -3.00994 | opp_overlap 753820 GGAACCTCAGACATA CGAGCAT CCAA ATGCTCG ATAATCTCGGTTAAT lplA2 754781 - 754065 - | lipoate protein ligase A clpB2 754972 - 757512 + | ATP-dependent Clp endopeptidase ATP-binding chain B trmU 758575 - 757490 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 650 758490 - 758504 + g 81 -5.8 -5.02074 | overlap 758468 AAAAGTCCCAGGACC TTATAC GAA GTATAA TTTTTTAAAAGATAG TERM 651 758838 - 758816 - R 100 -14.2 -5.78622 | opp_overlap 758811 TCATTTGAAAAAAAA GGCTCCCTAT AAA ACAGGGAGCC TTAGAATTATGATTT CF0654 760614 - 758896 - | hypothetical protein TERM 652 759437 - 759452 + g 81 -2.6 -5.56673 | gap 1, overlap 759440 TGAGCAAATTGTGCG TCAGTTG CTT CAAC-GA TTTTTTGTTCTAAGT TERM 653 760513 - 760529 + g 71 -6.5 -4.24726 | opp_overlap 760513 760512 GACAATTCCCACAAC CTGCAAG GCT CTAGCAG TTTTCGGATTGTTAT TERM 654 760723 - 760760 + G 89 -5.6 -5.51353 | opp_overlap 760728, overlap 760725 760728 AAAGTTTTCATCAAA AAAAAGAGACAGAACC CTATAA GGCTCTGTCTCTTATG TTTTTCTTCTTTTTC TERM 655 760725 - 760758 + G 80 -8.2 -4.32946 | opp_overlap 760728, overlap 760723 760728 AGTTTTCATCAAAAA AAAGAGACAGAACC CTATAA GGCTCTGTCTCTTA TGTTTTTCTTCTTTT TERM 656 760728 - 760755 + G 89 -9.9 -4.20092 | opp_overlap 760728, overlap 760725 760723 TTTCATCAAAAAAAA GAGACAGAACC CTATAA GGCTCTGTCTC TTATGTTTTTCTTCT TERM 657 760755 - 760728 - g 100 -12.8 -5.86061 | opp_overlap 760725 760723 760728 TTTCATCAAAAAAAA GAGACAGAACCC TATA AGGCTCTGTCTC TTATGTTTTTCTTCT CF0655 760632 - 760790 + | hypothetical protein CF0656 762268 - 760787 - | hypothetical protein TERM 658 761460 - 761481 + g 70 -5.9 -4.3487 | overlap 761475 CGCACAACTTGATTT TCTTCTTTG CTTT CAGAGAGGA TTTTAGCTTCTCTAT TERM 659 761767 - 761782 + g 74 -3.9 -5.1615 | TTACAACAGCATTTT GCTCG CAACCA CGGGC TTTTTTGCATCTTCG TERM 660 761932 - 761952 + g 71 -4 -4.86385 | CTTCCCTCAGACGGC GTTTCTCT AAAAA AGAGAGGC TTTGTTTTTGACGCT ptsN1 763047 - 762367 - | phosphotransferase system mannitol/fructose-specific Pts IIA TERM 661 762754 - 762769 + g 73 -7.6 -4.00756 | AGAAGATGCGTATTG CAAAGC TTCA GCTTTG TTATTTACTGAAATG ptsN2 763529 - 763053 - | phosphotransferase system mannitol/fructose-specific Pts IIA TERM 662 763288 - 763278 - G 70 -3.2 -4.91873 | TATAGCAATGAAAAA GTCG GAA CAAC TATTCAATTTACCGT dut 763974 - 763531 - | deoxyuridine 5'-triphosphate nucleotidohydrolase accD 764943 - 764017 - | acetyl-CoA carboxylase subunit beta sodM 765636 - 765019 - | Mn superoxide dismutase TERM 663 765195 - 765219 + g 70 -3.5 -5.00616 | overlap 765197 765199 GGGGATCCTGGTTTA CCGTTGCTTGT AAC ATAAGCATCTG TTTTTTGGGACAAAA mrsA2 767617 - 765815 - | phosphoglucomutase/phosphomannomutase TERM 664 767038 - 767015 - G 71 -9.6 -2.8805 | opp_overlap 767015 767014 767018 AGGATGTTTCATAGA GTCGACGAGA AAAA TCTCGTCTAC GTTTGCCAATTCTTG TERM 665 767015 - 767038 + g 71 -9.6 -2.77947 | opp_overlap 767015, overlap 767014 767018 AGGATGTTTCATAGA GTCGACGAGA AAAA TCTCGTCTAC GTTTGCCAATTCTTG TERM 666 767018 - 767035 + g 70 -9.9 -2.65279 | opp_overlap 767015, overlap 767015 767014 ATGTTTCATAGAGTC GACGAGA AAAA TCTCGTC TACGTTTGCCAATTC CF0663 768181 - 767717 - | hypothetical protein rnc 768301 - 769014 + | ribonuclease III TERM 667 769013 - 768999 - gf 73 -2.1 -5.24799 | CTACAAAGATAAAAA CACAG TGGAC CTGTA ATGAGTGTGGGGCTA radA 768980 - 770341 + | DNA repair protein RadA TERM 668 770664 - 770676 + G 80 -7.7 -4.39166 | ATAACCCAAGGTTTA GATCC TGC GGATC TTTTAGTATATGGGA TERM 669 770735 - 770723 - g 83 -6.3 -5.00884 | ACGTTTTCCAAAAAA TCCTA AAC TAGGA AGCTCTTCTTTGCGT TERM 670 770998 - 770972 - g 72 -3.1 -5.15634 | overlap 770974 TACCGCAGCAAAAAA CATAGAATCTT GGAAA AAGCTTCTATA CCCTTTGAACACTTC hemC 770319 - 771050 + | porphobilinogen deaminase TERM 671 771496 - 771526 + G 72 -9 -3.41527 | overlap 771497 771499 GTAACTACCGGGATT TTAGGGGGAATAGG AGC CCTAATTCCCCTAC TTGTCCTCGGAATTG TERM 672 771497 - 771525 + G 83 -12.5 -2.64595 | overlap 771496 771499 TAACTACCGGGATTT TAGGGGGAATAGG AGC CCTAATTCCCCTA CTTGTCCTCGGAATT TERM 673 771499 - 771523 + G 77 -10.7 -2.86271 | overlap 771497 771496 ACTACCGGGATTTTA GGGGGAATAGG AGC CCTAATTCCCC TACTTGTCCTCGGAA CF0667 771190 - 771591 + | hypothetical protein TERM 674 771968 - 771944 - g 72 -4.3 -4.72272 | overlap 771965 TTCCTCTATCAAAAA CATTGTGTGAT GAA ATCACAATATG CCAAATTAGCATATG CF0668 771743 - 772144 + | hypothetical protein CF0669 772541 - 772987 + | hypothetical protein imp2 775093 - 773009 - | inner membrane protein TERM 675 774737 - 774753 + g 100 -5.9 -5.77853 | TATAAATCCTACAGC CTTAAGA AAA TCTTGAG TTTTTTTTAGCCATT TERM 676 775984 - 775972 - g 74 -4.9 -4.6821 | AATCGCAATATAAAA TCTAT ATC ATAGA TGAAGTGCACATGTT TERM 677 776854 - 776841 - g 72 -3.1 -5.09895 | opp_overlap 776841 776853, overlap 776846 GACCTACCTAAAAAA GAAGC TTCC ACTTC TTTAGTGGGATCGGC dnaX2 775596 - 776933 + | DNA polymerase III subunits gamma and tau ebp 776938 - 777228 + | hypothetical protein ptsI 778928 - 777225 - | phosphoenolpyruvate-protein phosphotransferase ptsH 779273 - 778929 - | phosphotransferase system histidine-containing protein HPr CF0676 780054 - 779263 - | hypothetical protein TERM 678 779493 - 779483 - GH 85 -6.8 -5.01535 | overlap 779490 779492 TCATAACCATAAAAA GGGA AAA TCCC TAAAGATGTGCAGTT TERM 679 780722 - 780739 + GH 70 -2.7 -5.09685 | ATTAGCCCATATATT TGCTATT TCTG GATGGCA TTTTTCTCTATGTTC CF0675 780027 - 781490 + | hypothetical protein CF0677 781581 - 782738 + | hypothetical protein TERM 680 782744 - 782776 + F 79 -8.5 -3.88331 | CGAATCTTAAATACA GGGTTCTCTAGATCT CTG AGGTTTGGAGAACAC TTCCTTTTATTTGAA TERM 681 783099 - 783110 + G 84 -2.2 -5.71638 | CCTTTCCCCTACTTA TTGC AGGA GCAG TTTTTTTAGTTCTTA TERM 682 783561 - 783545 - g 74 -5.1 -4.67942 | opp_overlap 783545 GTCAATAAATCAAAA GAAACAG CAC CGGTTTC TCATCTAATCTTTAT CF0678 782903 - 783940 + | hypothetical protein pdhAB 785977 - 783941 - | oxoisovalerate dehydrogenase alpha-beta fusion TERM 683 784412 - 784390 - G 77 -6.2 -4.59109 | opp_overlap 784393, overlap 784392 GACAGGCGCTAAAAA TCCGGCGTTG ATA CAACGCCTTA TGCTCTAAAAAAACC TERM 684 784393 - 784409 + g 90 -12.3 -3.46602 | opp_overlap 784392 784390 AGGCGCTAAAAATCC GGCGTTG ATA CAACGCC TTATGCTCTAAAAAA TERM 685 784724 - 784701 - G 75 -10.4 -3.02511 | gap 1, opp_overlap 784692 TGGATTTCTGCAACA GGCTTGTGGAT ACC ATCCAC-AGCC ATACCAATAGCTGTT dnaJ 787188 - 786013 - | heat shock protein dnaJ TERM 686 786047 - 786076 + g 78 -7.3 -4.31329 | gap 1, opp_overlap 786055, overlap 786071 AAAAAACCTTTTATT TTATCC-AAGAAGC CTC GCTTCTTAGGAAAA TTTTCCGCTTTTTCC TERM 687 786274 - 786293 + g 79 -5 -5.12785 | AAGACGGCAAGTTCC TTCCTTCA ATAA TGTAGGAA TTTCTTTTTTCATTC TERM 688 786425 - 786408 - G 71 -6.9 -4.05495 | opp_overlap 786407 786417 CAATAAAAACGTAAA GGTCTCC TGAG GGAGCCC CGTTTTGACCAGCAT TERM 689 787013 - 787031 + g 72 -10.4 -2.50994 | overlap 787012 TCGTAAGATTCGCGC TTTTGAGC ATC GCTCAAAA CTTCATAAGCTTCCG rpsU 787394 - 787218 - | 30S ribosomal protein S21 gcp1 788234 - 787593 - | o-sialoglycoprotein endopeptidase TERM 690 787707 - 787717 + g 79 -5.4 -4.86731 | AGAAGGCGCAACCTT TTCG ATA CGAA TTTTCTTTGAAAAAC CF0683 788333 - 788599 + | hypothetical protein TERM 691 789550 - 789530 - g 70 -9.1 -3.10796 | TGCTACCAGGGAAGA GCTTCAAGA AGT TCTTGAAAC AACAAACATGCATGA lon 788889 - 791345 + | lon/ATP-dependent protease La TERM 692 791360 - 791396 + F 76 -7.6 -3.9461 | gap 1, opp_overlap 791359 791360, overlap 791357 791362 ACCCTTACAACACAG TTTAGAGCTGGTTTATT TATA AATAAAC-AGCTCTATA TTCTTCTTGCAAAAA TERM 693 791362 - 791394 + F 86 -10.2 -3.56318 | gap 1, opp_overlap 791360 791359, overlap 791357 791360 CCTTACAACACAGTT TAGAGCTGGTTTATT TATA AATAAAC-AGCTCTA TATTCTTCTTGCAAA CF0685 791487 - 792131 + | hypothetical protein atsA 792262 - 793182 + | ribonuclease Z xerC 793225 - 794163 + | site-specific tyrosine recombinase XerC yjjK 794204 - 795805 + | ABC transporter CF0689 795850 - 796440 + | Maf-like protein TERM 694 797996 - 797980 - g 77 -8.7 -3.9009 | opp_overlap 797980 AAGTTACTCCAGAAA CACGAGC AAA GCTCATG TTAGATATCCTAGAA omp09 796422 - 798128 + | outer membrane protein TERM 695 798970 - 798980 + G 76 -3.2 -5.19879 | overlap 798977 CGAGATCGCTATCGT TTCC ATG GGGA TTTTTCTCTTTCGCA TERM 696 800173 - 800184 + G 90 -7.2 -5.20333 | opp_overlap 800168 800173 TATGAGAAAAGAGAA GCGG ACAA CCGC TTTTTCTTCTACCTC TERM 697 800184 - 800173 - g 73 -7.2 -4.04187 | opp_overlap 800173, overlap 800168 TATGAGAAAAGAGAA GCGG ACAA CCGC TTTTTCTTCTACCTC CF0691 798139 - 800235 + | hypothetical protein def 800861 - 800301 - | peptide deformylase secG 801425 - 801111 - | preprotein translocase subunit SecG CF0694 801459 - 801653 + | hypothetical protein tpiA 802479 - 801715 - | triosephosphate isomerase TERM 698 802291 - 802306 + g 90 -7.6 -5.31456 | TTGCGCTCCTAGCCA GATGGA AGAG TCCATC TTTTTTATAGATTCG TERM 699 803992 - 804015 + G 75 -9.7 -3.29043 | opp_overlap 803992 803987 803996, overlap 803996 TGCCAATACAGTAGA CGAACATAG AGAAAA CTATGTTCG TTCTAGGGAAAACTT TERM 700 804015 - 803992 - g 72 -9.7 -2.92175 | opp_overlap 803992 803996, overlap 803987 803996 TGCCAATACAGTAGA CGAACATAG AGAAAA CTATGTTCG TTCTAGGGAAAACTT TERM 701 804211 - 804186 - g 71 -4.8 -4.57569 | overlap 804187 TCATTTCCGCAAAAA GCTTACACAA ACACAG TTGTGTAAGG GTACGACTGCAGGAC TERM 702 804210 - 804187 - g 70 -8.3 -3.3422 | overlap 804186 CATTTCCGCAAAAAG CTTACACAA ACACAG TTGTGTAAG GGTACGACTGCAGGA xseA 802616 - 804283 + | exodeoxyribonuclease VII large subunit xseB 804287 - 804514 + | exodeoxyribonuclease VII small subunit TERM 703 804557 - 804569 + G 72 -3.4 -5.02074 | overlap 804554 ATTTGGATTCCCTAG CTCA AGAGC TGAG TTTTTTACAAAATCA TERM 704 804641 - 804656 + G 74 -9 -3.54307 | ATGAAAAAATGTTTT CCCTGA TACA TCAGGG TTTAAACGAGATCTT CF0698 804529 - 804783 + | hypothetical protein TERM 705 804971 - 804992 + G 71 -3.7 -4.94262 | overlap 804972 804975 AGCTTTGCATTATGT TTTTTCCTC TACT GAGGATAAG TTTATTTTTGATGTC dxs 804780 - 806714 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 706 807102 - 807075 - T 80 -5 -5.252 | opp_overlap 807079 CATTTCTATAAAAAA CAAATTAAAAGC TTAT GCATTTAATTTA TATTTTAAGTTTGCA ksgA 808009 - 807155 - | dimethyladenosine transferase ebp08 809082 - 808000 - | hypothetical protein TERM 707 808941 - 808961 + g 87 -6.1 -5.24129 | opp_overlap 808937 808941, overlap 808943 GATCATGAATAGCAA TTCCTGCAG GAT CTTCAGGGA TTTTTTCTGCAAGAC trxA2 811296 - 809194 - | thioredoxin TERM 708 809409 - 809389 - G 89 -9.7 -4.25458 | opp_overlap 809387, overlap 809392 AACTTGAGGAAGAAA CAATCCTGC AAA GCAGGATAG GATGGCTTCACGGTC TERM 709 809406 - 809392 - G 89 -10 -4.24413 | opp_overlap 809387, overlap 809389 TTGAGGAAGAAACAA TCCTGC AAA GCAGGA TAGGATGGCTTCACG TERM 710 811441 - 811464 + r 71 -6.8 -4.10007 | opp_overlap 811446, overlap 811446 811454 TAATTTCCCCTCCAA CAAAAGAGCT TCCC AGCTCTTTTA TTTTCAACGAGTTGT TERM 711 811446 - 811459 + r 84 -6.7 -5.07652 | opp_overlap 811446, overlap 811441 811454 TCCCCTCCAACAAAA GAGCT TCCC AGCTC TTTTATTTTCAACGA TERM 712 811459 - 811446 - R 76 -6.7 -4.63218 | opp_overlap 811446 811441 811454 TCCCCTCCAACAAAA GAGCT TCCC AGCTC TTTTATTTTCAACGA TERM 713 811735 - 811777 + r 70 -4.3 -4.6759 | gap 1, opp_overlap 811735 811736, overlap 811736 811748 CTACACGATTAAAAA GTAGAGAATACACCCCAC ACTTTATA GTGAGG-GTATTCTCTAA TTTTCTTAAGATATT TERM 714 811777 - 811735 - R 80 -6.5 -4.79223 | gap 1, opp_overlap 811735 811736 811748, overlap 811736 CTACACGATTAAAAA GTAGAGAATACACCCCAC ACTTTATA GTGAGG-GTATTCTCTAA TTTTCTTAAGATATT TERM 715 811776 - 811736 - R 81 -10 -3.46811 | gap 1, opp_overlap 811735 811736 811748, overlap 811735 TACACGATTAAAAAG TAGAGAATACACCCCAC ACTTTATA GTGAGG-GTATTCTCTA ATTTTCTTAAGATAT omp10 812616 - 811798 - | outer membrane protein TERM 716 812390 - 812406 + g 85 -7.3 -4.86385 | opp_overlap 812390 812393 AAGGCTTTTTCAAAG GGATCTG CAA CAGATTC TTTGTTTTTCAAACT TERM 717 812742 - 812728 - R 74 -3.4 -5.24551 | opp_overlap 812730 812740, overlap 812729 812730 GGAAAGGAATAAAAA GGGCCC TAA GCACCC TCTCAGGGGGACAGA TERM 718 812773 - 812730 - R 76 -9.7 -2.82235 | gap 1, opp_overlap 812730 812740, overlap 812728 812729 AAAGGAATAAAAAGG GCCCTA-AGCACCCTCTCAG GGGGA CAGAGAGGATACTATAAGGC TTGTTTCAGATAAAT CF0704 813650 - 812793 - | hypothetical protein CF0705 814081 - 815691 + | hypothetical protein TERM 719 815707 - 815735 + F 70 -8.3 -3.17392 | gap 1, opp_overlap 815709 815711, overlap 815703 TCCTTTCATGTTGAA GAGACCTTCACT TCATGT AG-GAAGGTCTC TTAAATTAAAAAATA TERM 720 816647 - 816637 - g 72 -3.2 -5.15117 | GAAAATGTGAAAAAA TCCC GCG AGGA ATTTACTAGCTCCAA TERM 721 816934 - 816964 + G 88 -9.2 -4.56113 | opp_overlap 816941 TTTGGATTAACTCTT GAAGAATCGAAATA TCG TATTTTGCTTCTTC TTTCTTTACTCTCTT CF0706 816016 - 817359 + | hypothetical protein TERM 722 818525 - 818566 + G 71 -5.1 -4.564 | gap 1, overlap 818529 AAACACCCTATTTAG CCTGTCT-GCCGGAGCAGAG TGT TTCAGCTCTAGCGAAACAGG TTTTGGTTTAACCTT CF0707 817644 - 818918 + | hypothetical protein yfgA 819427 - 818996 - | transcription regulator TERM 723 819479 - 819463 - H 75 -5.1 -5.00138 | CACTGAAATGAAAAA CTCTGGA TTT TCTAGAG ACTTCCTAACCTCAG TERM 724 820253 - 820264 + G 74 -4.4 -4.93696 | AACTTGCTCCACGTC CTTC TGGA GAAG TTTTTGCTATTTCCG TERM 725 820347 - 820332 - g 100 -7.6 -5.77571 | opp_overlap 820334 ATTAAAAAAGAAAAA TACCGA TATT TCGGTA ATTCAAAAAGTACGC rnhB2 819694 - 820596 + | ribonuclease HIII CF0710 820821 - 821771 + | hypothetical protein CF0711 821899 - 822342 + | hypothetical protein TERM 726 822485 - 822469 - g 71 -6.7 -4.07562 | GAAATTTCAGACAAA GAAAATT CAT AATTTTC TATCCCACTGCCACT CF0712 822374 - 822601 + | hypothetical protein TERM 727 822771 - 822803 + G 79 -3.4 -5.40474 | gap 1, overlap 822771 CACGCCACGCACAGG CCC-AGGAAATCGTA TTCT TGCGACTTCCACGGG TTTTTTTGGAAGGCT TERM 728 823343 - 823331 - g 72 -3.4 -5.10064 | CTCAAGAGAGAAAAA GAGA TTTTG TCTC AGATGCGCGACGAGA CF0713 822694 - 823845 + | hypothetical protein TERM 729 823871 - 823858 - T 71 -5.3 -4.58283 | TAAGCTTCTTAAAAA TATCC TTAC GGATA AAAATAAAAGGGCTC TERM 730 823916 - 823881 - T 100 -12 -5.35224 | opp_overlap 823876 823882, overlap 823882 CGGATAAAAATAAAA GGGCTCTTTTGATGTT TTTC AACCTCAAAAGAGCCT TTTCCCTTAGACTGC TERM 731 823915 - 823882 - T 100 -15.5 -3.79508 | opp_overlap 823876 823882, overlap 823881 GGATAAAAATAAAAG GGCTCTTTTGATGTT TTTC AACCTCAAAAGAGCC TTTTCCCTTAGACTG TERM 732 823882 - 823915 + T 100 -15.5 -4.2803 | opp_overlap 823882 823881, overlap 823876 GGATAAAAATAAAAG GGCTCTTTTGATGTT TTTC AACCTCAAAAGAGCC TTTTCCCTTAGACTG gatB 825431 - 823968 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 733 824319 - 824333 + g 84 -10 -3.95435 | opp_overlap 824319, overlap 824314 AAGAATTCCTGAAAA GGCAAG ATT CTTGCC TTGTGTTTTACAGCG TERM 734 824333 - 824319 - G 86 -10 -4.12599 | opp_overlap 824319 824314 AAGAATTCCTGAAAA GGCAAG ATT CTTGCC TTGTGTTTTACAGCG TERM 735 824473 - 824453 - G 74 -6.1 -4.46615 | opp_overlap 824466 824467, overlap 824464 TATCACTAATCAAAA TCGCAGCAA TAT CTTCTGCGA GAGCATACTCACGCA TERM 736 824467 - 824490 + g 80 -11 -3.36195 | opp_overlap 824453 824464, overlap 824466 ATCGCAGCAATATCT TCTGCGAGAG CATA CTCACGCAGA TATCTTTGGTATTTG gatA 826906 - 825431 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 737 825944 - 825924 - G 100 -15.5 -3.33696 | opp_overlap 825920 825919 TGCGCTTCTAAGGAA CGGTATCCG TAA CGGATACCG TCAAATCTTGCTAGA gatC 827233 - 826928 - | aspartyl/glutamyl-tRNA amidotransferase subunit C CF0717 827433 - 827708 + | hypothetical protein TERM 738 827782 - 827817 + F 100 -10.6 -5.06414 | opp_overlap 827784 827790, overlap 827784 AGATATCGACTAGAA AATCAAAAGCCATGTG ATTT TACGTGGCTTTTGATA TTTTTGTTCCCACCC TERM 739 827815 - 827784 - f 100 -10.3 -4.48072 | opp_overlap 827784 827782, overlap 827790 ATATCGACTAGAAAA TCAAAAGCCATGT GATTTT ACGTGGCTTTTGA TATTTTTGTTCCCAC TERM 740 827784 - 827815 + F 100 -13.2 -4.16307 | opp_overlap 827784 827790, overlap 827782 ATATCGACTAGAAAA TCAAAAGCCATGTG ATTT TACGTGGCTTTTGA TATTTTTGTTCCCAC srp40 827939 - 828625 + | nuclear maintenance protein SRP40 TERM 741 829107 - 829094 - g 70 -5.9 -4.45175 | GAGGAAAAAACTAAA GAGGC TTCT GCCCC TGCCACTACTAGCCC TERM 742 830992 - 830972 - g 72 -8.3 -3.59979 | TCCTTCGAGCTTAAA TGGATAGCC TCT GGCTATACA CCTCCTCCTACCCGT omp11 828635 - 831097 + | outer membrane protein TERM 743 831750 - 831714 - g 72 -3.1 -5.055 | overlap 831727 TGAAGTTTGAAAAAA CAAACAAGTACAACATT TAC AATGTCAGCCTTGTTTA TCAACCAGATATCTA omp12 831128 - 831979 + | outer membrane protein TERM 744 832178 - 832143 - g 74 -9.2 -3.48276 | opp_overlap 832143 GCCTTCTTTATATAA GATTTTAATATCGTCA TCTC TGACGATACCAATATC TTTTCACTTCTCGCA TERM 745 833491 - 833476 - g 71 -7.6 -3.81488 | overlap 833483 833485 GGTGTTGAAATAGAA GCGAAA ACAG TTTCGC AAACAGATGGTTCTT TERM 746 833917 - 833897 - g 88 -8.3 -4.68103 | TTAACTGGAATAAAA CAGGATATG TTC CAAATCCTG AACGTCGCGCTTCCC TERM 747 834645 - 834631 - g 72 -10 -2.65339 | overlap 834630 ATAAAATTTGAGAAG CTCTCC TTC GGAGAG AAAACAGCTTACGAT pmp04 832123 - 834903 + | polymorphic outer membrane protein 9 TERM 748 834910 - 834933 + F 85 -8.8 -4.20868 | opp_overlap 834891 834909, overlap 834911 TCTTTCTAAAAGCAT CCCCTGCTCA TCTC TGGGCAGGGC TTCTTCTTTTCAGAA TERM 749 834911 - 834932 + F 87 -12.3 -3.11798 | opp_overlap 834909, overlap 834910 CTTTCTAAAAGCATC CCCTGCTCA TCTC TGGGCAGGG CTTCTTCTTTTCAGA TERM 750 837275 - 837265 - g 84 -6.8 -4.88918 | GGACTTTAAAGAAAA CAGC AGC GCTG AAGGAAGATACTTTG pmp05 835022 - 837622 + | polymorphic outer membrane protein TERM 751 838237 - 838224 - gf 77 -5.3 -4.85599 | opp_overlap 838235 TCTATTTCAGAAAAA CTGTT CCTC AACAG CCGGGGGAGCTGTTA omp13 837739 - 839295 + | outer membrane protein TERM 752 839861 - 839846 - gf 70 -5.4 -4.4521 | AGTAGCCAAAAACAA TGCGCA TATC TACGCA GGTTCTATCTATTAC pmp06 839190 - 840548 + | polymorphic outer membrane protein TERM 753 840560 - 840586 + F 85 -9.3 -3.95986 | overlap 840561 CTAGTCTCATCCACC TCCCCTGCCCC ATCCC GGGGCAGGGCC TTTCATTCCCTTCAA TERM 754 840561 - 840585 + F 87 -12.8 -2.97109 | overlap 840560 TAGTCTCATCCACCT CCCCTGCCCC ATCCC GGGGCAGGGC CTTTCATTCCCTTCA TERM 755 842800 - 842812 + G 74 -6.3 -4.371 | TCTATGCGGGCTCAT TGTTC TTC GAACA TTTTCATATGCTGCA TERM 756 843327 - 843355 + G 73 -8.7 -3.65351 | opp_overlap 843330 TCATTAGTTGTTACA GGAGCTGCTTGGG AAA CCAAAGCTGCACC TTTAGCTAGACATGC pmp07 840669 - 843500 + | polymorphic outer membrane protein G/9 family protein TERM 757 843570 - 843580 + F 74 -5.4 -4.79053 | opp_overlap 843563 CTACATCACTGCATA GCAA CTC TTGC TTTATTTTCCTCTTT TERM 758 844475 - 844489 + G 70 -5.6 -4.3207 | overlap 844472 TTTCTTCAGCTACGT GCTTCC GAA GGACGC TTTATCTATTTCTAT pmp08 843623 - 846175 + | polymorphic outer membrane protein TERM 759 846292 - 846238 - f 89 -10.8 -3.53722 | opp_overlap 846237, overlap 846239 TTGATACCGAGATAA TCTGCTTTTTTGCGTAGGCATAATTT ACA AAGTTATGCCCACGCCCACAAGCAGC AACATTTTTTCCTAT TERM 760 846291 - 846239 - f 93 -14.3 -2.71912 | opp_overlap 846237, overlap 846238 TGATACCGAGATAAT CTGCTTTTTTGCGTAGGCATAATTT ACA AAGTTATGCCCACGCCCACAAGCAG CAACATTTTTTCCTA TERM 761 848817 - 848834 + G 73 -7.1 -4.11394 | ACTACGCTCCTCATC TCATAGT TACA ACTATGA TTTTGGCGCTAAAAT pmp09 846328 - 848859 + | polymorphic outer membrane protein TERM 762 848870 - 848894 + F 100 -9.3 -4.68645 | overlap 848890 TTTAGATCTCCCTTA CTCCCTGTTTC TTA GAAGTGGGGAG TTTTCCTTTTACATC TERM 763 850138 - 850152 + G 71 -4.2 -5.00616 | opp_overlap 850139, overlap 850139 CCTCGCCTAAAACCT ATACGG GTA CCGTAG TTTTTTCAGGGAAAA TERM 764 851021 - 851011 - g 81 -5.4 -5.1675 | GGATTCATGAAAAAA TCCT TTC AGGA TCCCTCTATGCGCAA pmp10 848991 - 851714 + | polymorphic outer membrane protein TERM 765 851748 - 851716 - f 80 -9.2 -3.57792 | opp_overlap 851716 851718 851719 CTATTCACTTCTAAA TGTTTTCCCTGCTC TGTAT GAGCAGGGAAAGTA TTTCATTAAAATTTA TERM 766 851716 - 851748 + F 100 -13.6 -3.9444 | opp_overlap 851716, overlap 851718 851719 CTATTCACTTCTAAA TGTTTTCCCTGCTC TGTAT GAGCAGGGAAAGTA TTTCATTAAAATTTA TERM 767 851718 - 851746 + F 100 -14 -3.55262 | opp_overlap 851716, overlap 851716 851719 ATTCACTTCTAAATG TTTTCCCTGCTC TGTAT GAGCAGGGAAAG TATTTCATTAAAATT TERM 768 851719 - 851745 + F 100 -15.3 -2.72434 | opp_overlap 851716, overlap 851718 851716 TTCACTTCTAAATGT TTTCCCTGCTC TGTAT GAGCAGGGAAA GTATTTCATTAAAAT TERM 769 852282 - 852293 + G 73 -5.8 -4.58395 | TGCAGAAAGCTTTTT CACG ATGT CGTG TTTTTCCCAACTCAA TERM 770 853338 - 853328 - g 70 -5.4 -4.4078 | TCCCCCTAATTAAAA TCGA ATC TCGA GAGTTAACTGACGTA TERM 771 853898 - 853908 + G 81 -5.4 -5.14965 | TGATAAACTGGTCTT TAGG GAA CCTA TTTTTTCATACAGAT TERM 772 854034 - 854051 + G 72 -8.5 -3.48924 | opp_overlap 854030 854048 TTCAGAAATTACTCA TGGGTAT TGGA ATACCCA TTGTGTGGGAGCTGA pmp11 851929 - 854532 + | polymorphic outer membrane protein pmp9 family protein TERM 773 854563 - 854595 + F 77 -8.7 -3.63627 | opp_overlap 854563 TTCCCTCTTCAGAAA TTCAGAAAAATTTTT TCT ACAGATTTTTCTGAA TTTCCCCTATAGAAA pmp12 854768 - 857734 + | polymorphic outer membrane protein G/9 family protein TERM 774 857755 - 857766 + F 72 -5.8 -4.4572 | ATTAACGATAGGGTT GAGG CATG CCTC TTTCTTTAAGGTCTT pmp13 857760 - 860714 + | polymorphic outer membrane protein H family protein TERM 775 860726 - 860761 + F 95 -8.5 -5.36965 | CTAAAACCCTTTACC GAGAGAAATTTTCTT TGCCCT AGGGGAATTTCTCTC TTTTTTCTCGTCTTA pmp14 861182 - 862252 + | polymorphic outer membrane protein TERM 776 862805 - 862793 - gf 85 -5.5 -5.18371 | TCGGAGAAAATAAAA CCGCT CGA AACGG TGGGGCCATTTTTTC TERM 777 864427 - 864398 - g 75 -9.9 -3.39449 | overlap 864399 864426 CTTCATCAATAGCAA GGCCCCCCCCCCC AAGG GGGAGGGAAAACC CCTACATAGCGGCTT TERM 778 864422 - 864399 - g 79 -11.6 -2.63348 | overlap 864398 TTCATCAATAGCAAG GCCCCCCCCC CCAA GGGGGAGGGA AAACCCCTACATAGC pmp15 862471 - 864459 + | polymorphic outer membrane protein omp14 864363 - 865256 + | outer membrane protein TERM 779 865281 - 865295 + F 75 -7.2 -4.23528 | GAACTAAGACAACGC CTTATG AAA CATAAG TTTACTTTTAGCTTC TERM 780 866408 - 866427 + G 90 -9.4 -4.38141 | opp_overlap 866390, overlap 866406 CAATGTGCAATTTGG CGCAAAAA AGAA TTTTTGCG TTCTTTTCTATGACC TERM 781 867380 - 867357 - g 93 -7.4 -5.47218 | overlap 867358 TCGCATGCAAAAAAA CCGGGATTTC GTAT GCAATCCCGA GGGTATTCTGTAGGA TERM 782 867379 - 867358 - g 77 -8.7 -3.87608 | overlap 867357 CGCATGCAAAAAAAC CGGGATTTC GTAT GCAATCCCG AGGGTATTCTGTAGG pmp16 865284 - 868109 + | polymorphic outer membrane protein E family protein TERM 783 869751 - 869792 + G 76 -7.4 -4.28361 | opp_overlap 869756 TGTTATTACTACTAC GCAA-AGTGCTGGCCAACCG ACAA CGGTTGGCT-GTACGCTTGC TTTTACTAAACTTGC pmp17 868303 - 871149 + | polymorphic outer membrane protein E family protein pmp18 871171 - 874020 + | polymorphic outer membrane protein F family protein TERM 784 874060 - 874025 - T 90 -8.4 -5.02074 | overlap 874027 874031 TTACTTTTTAAAAAA GACAAAGCTGTAAAAG TCTC CTTTTACAGCCTTGAA GACGTCTACTTACTA TERM 785 874058 - 874027 - T 100 -15.4 -4.13963 | overlap 874025 874031 ACTTTTTAAAAAAGA CAAAGCTGTAAAAG TCTC CTTTTACAGCCTTG AAGACGTCTACTTAC TERM 786 874054 - 874031 - T 100 -12.6 -4.64992 | overlap 874027 874025 TTTAAAAAAGACAAA GCTGTAAAAG TCTC CTTTTACAGC CTTGAAGACGTCTAC CF0738 876276 - 874066 - | hypothetical protein CF0739 878260 - 876485 - | hypothetical protein TERM 787 878384 - 878367 - R 70 -2.1 -5.28166 | CAAAATCAACAAAAA CAATTTA AAAT TAAATTA AAATGAGATTTTTTA glgB 880562 - 878397 - | glycogen branching enzyme TERM 788 880262 - 880248 - G 75 -2.8 -5.27335 | TTGGTGAAATAAAAA GGAG TCTATCT CTCC CCATAAAGGAGAAAA CF0741 881573 - 880575 - | hypothetical protein TERM 789 880956 - 880936 - G 79 -5.4 -4.95957 | opp_overlap 880936 880941, overlap 880940 880941 CAAAGCAATGAAAAA GGAACCTC TTCTC GAGTTTCC TTTTTTGGAAGCTCA TERM 790 880936 - 880956 + g 81 -5.4 -5.02074 | opp_overlap 880936 880940 880941, overlap 880941 CAAAGCAATGAAAAA GGAACCTC TTCTC GAGTTTCC TTTTTTGGAAGCTCA CF0742 882835 - 881570 - | hypothetical protein TERM 791 882539 - 882529 - G 71 -6.8 -4.11183 | opp_overlap 882528 CTTTATTAGAAACAA GCAG GCA CTGC CTTCCTAAAGAATTA hflX 884313 - 882955 - | GTP-binding protein phnP2 885138 - 884323 - | beta-lactamase superfamily metal dependent hydrolase CF0745 885894 - 885190 - | hypothetical protein TERM 792 886103 - 886059 - R 100 -14.1 -4.27192 | gap 1, opp_overlap 886071 AAACTCGGACCAAAA GATGGTTAAGAAGAATCTTT AGAAGA AAAGATTCTTCTTAAC-ATC AAAGAAAAGCTGCAA artJ 886889 - 886125 - | ABC transporter of amino acids TERM 793 888791 - 888779 - g 73 -2 -5.2197 | GAGAAAAAGCAAAAA TTCT TAATG AGAA GTTACAGGCTTGTTG TERM 794 889719 - 889695 - g 80 -10.1 -3.64371 | opp_overlap 889695, overlap 889686 889698 AACTCATATTGTAAA CAATATTGCCC ATT GGACAACATTG TTCTGGGCGAATCTC CF0747 887023 - 890160 + | hypothetical protein TERM 795 890585 - 890564 - g 73 -6.7 -4.17556 | gap 1, overlap 890567 TATAGGCGCAAGAAA CATGCAAAAC TTT GTTTTGC-TG CAAGAAGCCAGTCAA TERM 796 890583 - 890567 - g 71 -9.5 -2.80512 | overlap 890564 AGGCGCAAGAAACAT GCAAAAC TTT GTTTTGC TGCAAGAAGCCAGTC aroG1 890181 - 891041 + | 3-deoxy-7-phosphoheptulonate synthase TERM 797 891164 - 891151 - f 76 -2.5 -5.54338 | TAATTAAAAGAAAAA TAAAA TCAA TTTTA AAACAATTTATTTCT CF0749 891274 - 891468 + | hypothetical protein TERM 798 891519 - 891478 - T 90 -13.9 -3.11173 | overlap 891483 AGATAACTGAGCTAA CGACACTCACCTTCTTGTT GGAA AACAAGAAGGTGAGCACAG ACGCTATTCTATATT TERM 799 891514 - 891483 - T 100 -19 -2.92371 | overlap 891478 ACTGAGCTAACGACA CTCACCTTCTTGTT GGAA AACAAGAAGGTGAG CACAGACGCTATTCT panF 893049 - 891646 - | sodium/proline, sodium/panthothenate symporters TERM 800 892954 - 892940 - G 77 -6.4 -4.52349 | ACAAATAAACACAAA GCTTGA ACA CCAAGC AAACAACCTAAAAAT CF0751 893331 - 893594 + | hypothetical protein TERM 801 893640 - 893601 - T 100 -10 -5.18866 | gap 1, opp_overlap 893606 893607, overlap 893606 893607 CTTAAATAAAGAAAA TAAAGCCCCTGCCGCTGCG CAA CGCAGCGAG-GGGGTTTCA TGATAGCAACATTCT TERM 802 893606 - 893634 + T 84 -11.8 -2.87051 | gap 2, opp_overlap 893601 893606 893607, overlap 893607 ATAAAGAAAATAAAG CCCCTGCCGCTGCG CAA CGCAGCG--AGGGG GTTTCATGATAGCAA TERM 803 893635 - 893606 - T 91 -12.1 -3.57927 | gap 1, opp_overlap 893606 893607, overlap 893601 893607 ATAAAGAAAATAAAG CCCCTGCCGCTGCG CAA CGCAGCGAG-GGGG TTTCATGATAGCAAC TERM 804 893607 - 893635 + T 95 -12.3 -3.78775 | opp_overlap 893606 893601 893607, overlap 893606 TAAAGAAAATAAAGC CCCTGCCGCTGCG CAA CGCAGCGAGGGGG TTTCATGATAGCAAC TERM 805 893635 - 893607 - T 86 -12.3 -2.72316 | opp_overlap 893606 893607, overlap 893606 893601 TAAAGAAAATAAAGC CCCTGCCGCTGCG CAA CGCAGCGAGGGGG TTTCATGATAGCAAC CF0752 895229 - 893583 - | hypothetical protein ycfF 895579 - 895244 - | bis (5'-nucleosyl)-tetraphosphatase ebp09 896454 - 895576 - | hypothetical protein CF0755 896592 - 898676 + | hypothetical protein TERM 806 898725 - 898695 - T 93 -12.7 -3.43689 | gap 1, overlap 898701 AAAACCGTAGGATAA GCGAAAGCCGTAGT AATT AC-ACGGCTCTCGC ACAAATTGCCCTTCT CF0756 899912 - 898677 - | hypothetical protein TERM 807 900096 - 900080 - H 86 -5.3 -5.72622 | TTGAGAAACAAAAAA TTTAATT ATC AATTAAA ATAAACACAAAACAC TERM 808 900315 - 900351 + H 75 -8 -3.89212 | overlap 900317 900318 AAAGAAAACTTTCCC TTTCCCATCTAGCTAC TCCAT GTAGCTGGATGGGGTC TTTCCTATATGAATA TERM 809 900317 - 900349 + H 100 -15 -3.53018 | overlap 900315 900318 AGAAAACTTTCCCTT TCCCATCTAGCTAC TCCAT GTAGCTGGATGGGG TCTTTCCTATATGAA TERM 810 900318 - 900348 + H 100 -16.3 -2.71329 | overlap 900317 900315 GAAAACTTTCCCTTT CCCATCTAGCTAC TCCAT GTAGCTGGATGGG GTCTTTCCTATATGA TERM 811 900391 - 900373 - H 93 -6 -5.85737 | overlap 900375 ATATGAATAAAAAAA CACGTCTT AAT AAGACGCA GCTCTATTTTTCCCA TERM 812 900389 - 900375 - H 89 -8.6 -4.55661 | overlap 900373 ATGAATAAAAAAACA CGTCTT AAT AAGACG CAGCTCTATTTTTCC TERM 813 900858 - 900872 + G 70 -2.9 -5.03994 | opp_overlap 900858 GCTATCGCGGGAAAG TTTCT CCAGA AGAAA TTTTTATCTCTGACG aspC 900581 - 901777 + | L,L-diaminopimelate aminotransferase TERM 814 902207 - 902171 - g 88 -8.1 -5.04249 | opp_overlap 902182, overlap 902175 TCTCTAAAAAACAAA CAAATATCTATGGTGTC AAT GACACCTTAGATATCAA TCAATGCTGTTTTGC TERM 815 902203 - 902175 - g 100 -13.3 -5.00234 | opp_overlap 902182, overlap 902171 TAAAAAACAAACAAA TATCTATGGTGTC AAT GACACCTTAGATA TCAATCAATGCTGTT TERM 816 902182 - 902196 + G 75 -10 -3.1355 | opp_overlap 902175 902171 CAAACAAATATCTAT GGTGTC AAT GACACC TTAGATATCAATCAA TERM 817 902734 - 902711 - g 74 -4.6 -4.89562 | opp_overlap 902713, overlap 902713 TGAAAATCAACAAAA CAGAACGTAA ACAA TTCCGTTCTA TCATCTTTAAAGATA CF0758 901774 - 902817 + | hypothetical protein CF0759 903011 - 902814 - | hypothetical protein TERM 818 902939 - 902971 + g 79 -9.2 -3.88001 | opp_overlap 902935 902929, overlap 902940 GAAGAGATAAAGTTT TGGCTAACAAAGCA ATAAC TGCTTCGTTAGCCC TTCCTTTTTCTGGAG TERM 819 902940 - 902970 + g 83 -12.7 -2.92077 | opp_overlap 902935 902929, overlap 902939 AAGAGATAAAGTTTT GGCTAACAAAGCA ATAAC TGCTTCGTTAGCC CTTCCTTTTTCTGGA CF0760 904037 - 903096 - | hypothetical protein TERM 820 904001 - 904019 + g 70 -3 -5.17488 | opp_overlap 904005, overlap 904002 GAAATACTAACCCTA AGCACACT AGA AGTGAGCA TTTTCTTTTGATATT CF0761 905356 - 904148 - | hypothetical protein TERM 821 905106 - 905080 - G 71 -5 -4.56597 | TTTCCTCTGCAAAAA CCGCAGCCCCAG TTG CTGGGGATAAAG ATGAGGGAGCTCCCC proS 905619 - 907352 + | prolyl-tRNA synthetase hrcA 907461 - 908621 + | heat-inducible transcription repressor grpE 908618 - 909181 + | heat shock protein HSP70 cofactor TERM 822 910708 - 910698 - g 81 -5.4 -5.14563 | GTCGCGAGCAAAAAA TTCG TAT CGAA GCAAGCTCAGGATTA TERM 823 910805 - 910787 - g 83 -3.1 -5.55695 | gap 1 GAAGAAGATAAAAAA CGCC-GAG AAGC CTCTGACG TAAGAAACGAAGCTG dnaK 909209 - 911203 + | molecular chaperone DnaK TERM 824 911227 - 911256 + F 100 -14.5 -5.2853 | AAATCTTATCCTTTA TTCCCTATTTCTC TTCA GAGAGATAGGGAA TTTTCTTTTTAACTC TERM 825 911393 - 911383 - g 72 -3.2 -5.11881 | AAATAAAAAAAAGAA GACC TAA AGTC TTTAAACGAAGCACT vacB 911361 - 913391 + | ribonuclease R mag 913391 - 913975 + | 3-methyladenine DNA glycosylase CF0768 914133 - 914792 + | hypothetical protein TERM 826 915048 - 915035 - g 88 -8.1 -5.06585 | TAAAGCACATAAAAA CGCTG TAAG CAGCG AAAGTATCTTTATTC CF0769 914916 - 915077 + | hypothetical protein TERM 827 915163 - 915144 - g 71 -5 -4.64383 | opp_overlap 915148 AAGGAGAAACCAAAA GAAACGTT CTTA AGCGTTTC GAGCGCATAGAAGTT CF0770 915095 - 915256 + | hypothetical protein CF0771 915277 - 915753 + | hypothetical protein tlyC3 915734 - 916873 + | hemolysin rsbV1 916989 - 917339 + | anti-sigma F factor antagonist TERM 828 918139 - 918125 - g 93 -8.6 -5.29385 | opp_overlap 918124 AATCCAATTAAAAAA TCTCCT CAC AGGAGA ACTCTTCGTCTCTGC TERM 829 918179 - 918165 - g 78 -7.2 -4.36914 | TCTGCTCCCATAAAA TGTTTC TCC GAAACA GCGCCCAATCTTATG TERM 830 918527 - 918515 - g 70 -7.7 -3.72576 | opp_overlap 918514 918515 CGCCTCCTTATCAAA GCTCT ACA AGAGC ATGTCTTCTCACGAA TERM 831 918684 - 918672 - g 77 -6.3 -4.65219 | opp_overlap 918677, overlap 918677 AGAACAGAAAAAGAA GGAAA TCC TTTCC CCATTAAAGGAGAGG ebp10 917400 - 919262 + | hypothetical protein CF0775 919296 - 919517 + | hypothetical protein TERM 832 920299 - 920289 - gf 76 -6.8 -4.44211 | CGCAACAGAAAATAA TCCC CTA GGGA AAAGACTTCGCAAAA CF0776 919483 - 920598 + | hypothetical protein CF0777 920571 - 921353 + | hypothetical protein TERM 833 921413 - 921391 - g 72 -10 -2.61144 | opp_overlap 921393 921395, overlap 921390 921388 921393 TTAGCTCCTAAATAC GATAGGATAA ACT CTATCCTATC TCTAGGCATGCATCA ubiE 921328 - 922020 + | ubiquinone/menaquinone biosynthesis methyltransferase ebp11 923013 - 922024 - | hypothetical protein TERM 834 922191 - 922169 - G 77 -10 -3.33815 | overlap 922174 AGCTCTTTCAATGAA GCAAATCTTT CTG AAAGATTCGC GAGGTTTAACTGGTC dapF 923973 - 923155 - | diaminopimelate epimerase clpP1 924505 - 923915 - | ATP-dependent Clp protease proteolytic subunit TERM 835 924434 - 924422 - GR 100 -7.7 -5.61596 | AGGCTCAGAAAAAAA TACCC GAC GGGTA TCTAGAATTTTTCTA glyA 926006 - 924513 - | serine hydroxymethyltransferase TERM 836 924558 - 924548 - G 75 -8.2 -3.9712 | overlap 924549 CGATTTCAGGATAAA GCGG GAA CCGC GCCAATAAATCTGCG TERM 837 925127 - 925117 - G 71 -6.8 -3.99275 | opp_overlap 925120, overlap 925118 GTAGATAACATTAAA CCTC CAC GAGG TCCTCGCAGTGTTTT TERM 838 925685 - 925663 - G 76 -7 -4.36914 | opp_overlap 925666, overlap 925666 TGTGGTTGTACAAAA GCACTCTCTG CAC CAAAGAGTTC TTTAGCGGTTTCTGC hemD 926337 - 926981 + | uroporphyrinogen-III synthase CF0784 927003 - 927404 + | hypothetical protein CF0785 927482 - 928579 + | hypothetical protein TERM 839 928587 - 928623 + T 81 -8 -4.13767 | opp_overlap 928592 AACCCTAATTGCGTA CTCAAGGAGAGCATTT GATAA AAATGCCCTCCTCGCG TTTTCAAATAAAAAA TERM 840 928618 - 928592 - T 84 -11.7 -3.06133 | opp_overlap 928587 TAATTGCGTACTCAA GGAGAGCATTT GATAA AAATGCCCTCC TCGCGTTTTCAAATA TERM 841 928723 - 928707 - T 80 -7.3 -4.50976 | opp_overlap 928707 GTTTATAGGAGAAAA GCAATCC TAT GAATTGC GTATTTAGGAAAGAA CF0786 928996 - 928814 - | hypothetical protein TERM 842 929344 - 929320 - g 79 -3.6 -5.40072 | CGGCTGTGAAAAAAA TGGATGAG TTTAACGCT CTCACCCA AGAAATGACAGCTGC TERM 843 929724 - 929745 + G 72 -4.5 -4.66537 | gap 1 AAAGACCGCCTGATT TTCTGCGAGC ATT GTTCG-AGAA TTTTGTATTGGCGAG ebp12 929061 - 929825 + | hypothetical protein TERM 844 929928 - 929914 - T 79 -10 -3.21696 | overlap 929912 TCATAAGAAGAGATA CTGGAG AAA CTCCAG GGGCCGTAAGGCTAC kpsF 931218 - 930229 - | sugar-phosphate isomerase-like protein sucB2 932420 - 931251 - | branched-chain alpha-keto acid dehydrogenase subunit E2 gltT 933681 - 932434 - | glutamate symporter TERM 845 932706 - 932693 - G 70 -3.1 -4.85599 | CCTACTGCAGAAAAA GTTGC TGCC ACAAC GATTAACAACAAACT TERM 846 933149 - 933128 - G 73 -6.7 -4.29738 | gap 1, overlap 933129 933132 933140 CCATAGGGAGCAAAA GCCATGATCA TAT TGATCATG-C GTAGCATGATCTCAG TERM 847 933189 - 933201 + g 72 -9.1 -3.28712 | opp_overlap 933185 CAATAAACTTAGCCA CAGGG CGT CCCTG TTCTCCAGAAAGACG TERM 848 933552 - 933541 - G 72 -4.4 -4.69656 | AACCATGGAACAAAA TACC AAGG GGTA AACAACCATGCTCAA lpxK 934815 - 933685 - | tetraacyldisaccharide 4'-kinase TERM 849 934661 - 934641 - G 70 -2.5 -5.00884 | overlap 934642 934644 AGGGTGCTGAAAAAA GTAGCTTTC GTC GAAAGCTTG CGGTACGGGCAAATA TERM 850 934658 - 934644 - G 70 -8.6 -3.37655 | overlap 934642 934641 GTGCTGAAAAAAGTA GCTTTC GTC GAAAGC TTGCGGTACGGGCAA rrm10 935839 - 935042 - | tRNA/rRNA methyltransferase rrm11 936651 - 935827 - | tRNA/rRNA methyltransferase ribC 937258 - 936653 - | riboflavin synthase subunit alpha TERM 851 937303 - 937314 + H 71 -3 -5.14563 | opp_overlap 937293, overlap 937297 937293 TAAAACACTCTTACG GTAA GGTG TTAC TTTTTTCGTCAAAAA TERM 852 937414 - 937395 - H 91 -2.8 -6.09133 | opp_overlap 937397, overlap 937397 GATTGGAAAAAAAAA TTTGCAAC TTTA GTCGCATA GATTTATCCTGCGTT CF0795 937477 - 937935 + | transcriptional regulator NrdR dksA 937964 - 938338 + | dnaK suppressor TERM 853 938449 - 938485 + G 73 -7.4 -4.08693 | gap 1, opp_overlap 938466, overlap 938448 GGAAATCTGCCGAAT GCTAACCCCATACTATA CCAA TATAGT-TGGGGGAAGC TATTTTTCTGCATTT lspA 938344 - 938841 + | lipoprotein signal peptidase dagA2 938906 - 940261 + | D-alanine/glycine permease TERM 854 940332 - 940313 - f 84 -12.2 -2.92642 | opp_overlap 940313 ATTATCAGCTACATA TCCCCAAC GCCT GTTGGGGA TTTTATTTTCTATAT TERM 855 940313 - 940332 + F 100 -12.2 -5.24647 | opp_overlap 940313 ATTATCAGCTACATA TCCCCAAC GCCT GTTGGGGA TTTTATTTTCTATAT TERM 856 940654 - 940642 - g 82 -7.7 -4.56775 | opp_overlap 940642 ATTCCTGGGGAAAAA GCTGA TTT TCAGC TGGTTACGCAAGAAA CF0799 940454 - 940807 + | hypothetical protein CF0800 940831 - 941133 + | hypothetical protein TERM 857 941680 - 941694 + G 78 -4.2 -5.28778 | ATTTACAACTGGGAG CTCAAG GAG CTGGAG TTTTTTCTAAGTCGT pmp19 941361 - 944174 + | polymorphic outer membrane protein A family TERM 858 944386 - 944397 + G 75 -5.8 -4.7373 | opp_overlap 944378 CTATGAAGTGGCTAT CAGC TACA GCTG TTTTTGCTGCCGTGC TERM 859 944675 - 944649 - g 77 -5 -4.86731 | overlap 944651 944653 944654 944665 TCTCCTGAAACAAAA GATAGCGCTGCT AAA AGCAGCGAAAGC AGCAATCCAGCAAGC TERM 860 944671 - 944653 - g 72 -8.8 -3.61331 | overlap 944651 944649 944654 944665 CTGAAACAAAAGATA GCGCTGCT AAA AGCAGCGA AAGCAGCAATCCAGC TERM 861 944670 - 944654 - g 83 -12.3 -2.75714 | overlap 944653 944651 944649 944665 TGAAACAAAAGATAG CGCTGCT AAA AGCAGCG AAAGCAGCAATCCAG TERM 862 945414 - 945397 - g 75 -9.9 -3.3197 | overlap 945388 ACATGACCTTCAGAA GGAACTC TGCT GAGTTCC CCGCAATAATTGATA TERM 863 945949 - 945924 - g 70 -9.9 -2.54171 | gap 1, opp_overlap 945926, overlap 945923 ACGGTTAAAAACGAT GAGGGAACGAAT GCA ATT-GTTCCCTC TGTGCAGTCCAAAAT TERM 864 946792 - 946746 - g 86 -10.9 -3.85817 | opp_overlap 946747 ATTTCTTCTCAGAAA TCTGAAGTAGCTGCAGTAGTT TCCGG AGCCCCTGCAGCGACTCCAGA CGATTTAGACTTCAA TERM 865 948326 - 948315 - g 70 -5.8 -4.31293 | CTAGATATCAATAAA CCCA GCAA TGGG AAAACCTCTCAACAG pmp20 944373 - 949994 + | polymorphic outer membrane protein B TERM 866 950067 - 950016 - T 100 -17.6 -3.14463 | opp_overlap 950033 AATTTGTTTCAGGAA GTTTGTTTTGTAATTGAGCACCTG CATG CAGGTGCTCAATTACAAAGCTAAA GACAGAACTCAAAAT TERM 867 950033 - 950050 + T 82 -11.3 -2.52676 | opp_overlap 950016 TTGTTTTGTAATTGA GCACCTG CATG CAGGTGC TCAATTACAAAGCTA thiM 950906 - 950118 - | hydroxyethylthiazole kinase TERM 868 950856 - 950831 - G 73 -7.1 -4.12901 | gap 1, opp_overlap 950825 950830 950855, overlap 950825 GAAAATCCATAGAAA CGTAGTTTGTAA TAT TTA-AAACTACG GGTTGTTCCTGTCTT thiE 951628 - 950900 - | thiamine-phosphate pyrophosphorylase TERM 869 951478 - 951491 + g 79 -3.1 -5.38047 | CAAAATCGACATATT CATCT ACTG GGATG TTTTTTCTATCGGTG TERM 870 951614 - 951589 - G 77 -6.3 -4.5852 | overlap 951583 GAAGGGAAATTAAAA TACTCTTAAAG AAAC CCTTAAGAATA AAAACAACAGCCACT TERM 871 951656 - 951666 + H 82 -5.4 -5.21709 | TATTAACTCGAGCAG GTTC TAA GAAC TTTTTTCATCTAAAC TERM 872 951763 - 951743 - H 83 -7.7 -4.67651 | ATAGGTTAAAACAAA TATCCTTGT TGT ACAAGAATA AAAAGTACACGGAGA TERM 873 952737 - 952713 - g 70 -9.5 -2.67747 | overlap 952712 952724 TGTCGAGATTACAAC TTTTTCCAACA TGT TGTTGAAAAAA ACAATCACACAGATC adhS2 952122 - 952955 + | ABC transporter/periplasmic Mn/Zn-binding protein TERM 874 953024 - 953050 + G 89 -10.2 -4.21989 | opp_overlap 953023 953024 TGGATTATCAATAAT GTCTCCTTCATG GTT CATGAAAGGGAC TTTGTTGGCATTATA TERM 875 953050 - 953024 - g 73 -10.2 -2.84693 | opp_overlap 953024, overlap 953023 TGGATTATCAATAAT GTCTCCTTCATG GTT CATGAAAGGGAC TTTGTTGGCATTATA yebM 952952 - 953671 + | ABC transporter of metals obgE 955466 - 954459 - | GTPase ObgE yebI 953668 - 954561 + | ABC transporter of metals TERM 876 954813 - 954839 + gT 74 -5.1 -4.73388 | opp_overlap 954813 954812 GGCGCCTTCTATAAT CCCCGGAATAT CCGCT ATAATCCAGGG TTTTTGATACAGCTT TERM 877 955541 - 955510 - TR 84 -5.2 -5.45813 | TATTAAAAAAGAAAA GCCCTATTTCATGC GTGA GCAAAAAATAAAGC TTTCTTGACAAACTA rpmA 955832 - 955584 - | 50S ribosomal protein L27 rplU 956183 - 955863 - | 50S ribosomal protein L21 TERM 878 956521 - 956496 - R 71 -3.1 -5.15634 | opp_overlap 956495 956496 956501, overlap 956483 GAGCTTATGAAAAAA GCAGGCCTGCG GATC CGGAGGTTTGC GTTTGTTCTACCCTA CF0811 956937 - 956485 - | hypothetical protein TERM 879 957080 - 957090 + H 73 -4 -5.08178 | CTTCGATTAAAAGTG TTCT TGA AGAA TTTTTATATATGTAT ispF 957245 - 957775 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase cysJ 958821 - 957772 - | sulfite reductase flavoprotein subunit TERM 880 957798 - 957820 + g 70 -9.2 -3.26405 | opp_overlap 957797, overlap 957797 CGACAACGTAACGAC GCTCTTCC TTTAACT GGAAGAGC TGATTTTTCCCTAGG rpsJ 959155 - 958838 - | 30S ribosomal protein S10 fusA 961247 - 959163 - | elongation factor G TERM 881 961051 - 961069 + g 77 -6 -4.49316 | opp_overlap 961053 ACGGTCGTCGCAGCA GAGGTAAT AGT AATACCTC TTTCTTGTTCCTGCT rps7 961762 - 961289 - | 30S ribosomal protein S7 rpsL 962177 - 961806 - | 30S ribosomal protein S12 CF0818 962949 - 963227 + | hypothetical protein TERM 882 963249 - 963265 + F 82 -4.5 -5.46657 | TATTTTTTTACCAAC CTATTTA TTC TGAATAG TTTTTTCTTGAAGTC tsp 963353 - 965308 + | cell division related penicillin-binding proteinase TERM 883 965293 - 965323 + F 75 -8.3 -3.89524 | overlap 965295 TCGTAAAGCTTCGGT TTCTTTAGGAGGC TAACT GCCTCCTAAAGTC TTTATAAAGTGAAAT TERM 884 965295 - 965321 + F 100 -15.3 -3.53733 | overlap 965293 GTAAAGCTTCGGTTT CTTTAGGAGGC TAACT GCCTCCTAAAG TCTTTATAAAGTGAA CF0820 965496 - 965885 + | hypothetical protein TERM 885 965972 - 965998 + T 100 -12.3 -4.98531 | opp_overlap 965972 GAAAACACAAAAAAA GCCGCCCTAGA CTATC TCTAAGGCGGC TTTTTCGTTTACCAA TERM 886 965998 - 965972 - T 100 -14.5 -5.9362 | opp_overlap 965972 GAAAACACAAAAAAA GCCGCCCTAGA CTATC TCTAAGGCGGC TTTTTCGTTTACCAA omp15 967708 - 966032 - | outer membrane protein TERM 887 967610 - 967598 - G 71 -6.3 -4.16842 | GGCACTGGCAATAAA TCTTG TAA CAAGA GACTCTGCAGCAGCT TERM 888 967838 - 967802 - R 90 -11.7 -3.87815 | GTTTATTTTTATAAA GGCAGTTAGCAGGGAAA TAC TTTACCTCCTAACTACC CGATCAATTTAAGTA omp16 968142 - 967873 - | outer membrane protein TERM 889 968380 - 968366 - H 70 -7.2 -3.88985 | AAAACTCTGGATAAA TAGAAC TTT GTTCTA GAAAAGGTTGGAAGG CF0823 968568 - 968747 + | hypothetical protein gltX 970320 - 968803 - | glutamyl-tRNA synthetase TERM 890 969002 - 969013 + g 74 -4.4 -4.91511 | opp_overlap 969002 GCCACATAGAGCAAA GGTA TAAC TACC TTTTTATGATGCACT TERM 891 970469 - 970431 - R 100 -9.8 -5.88061 | opp_overlap 970437 AAAAAACCAAAAAAA TAAAAACTCTGCACCTCT TAT AAAGCTACAGAGTTTCTA TGCAAGTTTACATAC euo2 971136 - 970588 - | HC protease EUO TERM 892 970854 - 970890 + g 71 -6 -4.25056 | CAGAATAGTATCCCT TTTCGTTATCAAAGAG CAGCT CTCCTTGATAAAGAGA TTTCTTCCTCGAATA CF0826 972933 - 971773 - | hypothetical protein recJ 975153 - 973384 - | Mg-dependent 5'-3' ssDNA-specific exonuclease TERM 893 973937 - 973925 - G 70 -7.7 -3.79071 | opp_overlap 973925 CCGAGAAGAGGGAAA GAACC TAT GGTTC TTAATGATCCCTTAC TERM 894 974006 - 973977 - G 73 -7.3 -4.11183 | gap 1, opp_overlap 973985 CCTGATTAGAAATAA TAGCTACAGGCTTA TTA TAGGCCT-TAGCTA GGCGTGCAGAAATAA TERM 895 975250 - 975226 - R 80 -9.3 -3.64703 | opp_overlap 975226 CCTTCCGTACCCAAA CGGCGATAACC TAA AGTTATAGCCG TTGTCTTTCCTCTTT TERM 896 975226 - 975250 + r 82 -8.6 -3.90949 | opp_overlap 975226 CCTTCCGTACCCAAA CGGCGATAAC CTAAA GTTATAGCCG TTGTCTTTCCTCTTT secDF 979456 - 975242 - | bifunctional preprotein translocase subunit SecD/SecF TERM 897 977927 - 977913 - G 73 -10 -2.90615 | overlap 977910 AGGGTTTCTAAACGA TCGCGA ACA TCGCGA ACTTCAAGACTTGCG CF0829 979604 - 979434 - | hypothetical protein TERM 898 979695 - 979659 - R 80 -6.7 -4.7373 | gap 1, opp_overlap 979663, overlap 979663 GCATTTTATCAAAAA TCTATCTTCCCC-GAG GATTAT CTCTGGGGAAGATCAA ATCACGCGGCACCAC TERM 899 979691 - 979663 - R 76 -9.7 -2.86601 | gap 1, opp_overlap 979663, overlap 979659 TTTATCAAAAATCTA TCTTCCCC-GAG GATTAT CTCTGGGGAAGA TCAAATCACGCGGCA CF0830 980801 - 979692 - | hypothetical protein TERM 900 980762 - 980782 + g 70 -9.8 -2.71263 | opp_overlap 980758 TACACATAAATGCGG GTTTTGGG AGGTG CCCAAAAC TCATTCGAGGCAATT TERM 901 980916 - 980896 - H 86 -2.5 -5.85425 | overlap 980897 CAAAGAAATAAAAAA CTGCTAGGA TCT TCCAAACAA AAAATTTTTATCAAT yaeS 981401 - 982153 + | undecaprenyl pyrophosphate synthetase TERM 902 982203 - 982228 + G 70 -7.7 -3.77953 | gap 1 CTATGGGGATCTTTT CCAACGAGTTGT TGT ACA-TTCGTTGG TTCTTACATTCTTGG cdsA 982156 - 983076 + | phosphatidate cytidylyltransferase TERM 903 983586 - 983562 - g 88 -11.5 -3.65046 | TCTCTATCGCAAGAA GCTTTACACGC TGA GCTTGTAAAGC GTGATGAAGCAGACA cmk 983073 - 983723 + | cytidylate kinase TERM 904 983990 - 984006 + G 71 -6.5 -4.21827 | GGCGGGGGAAATTCT GCAGCAT TTA AAGCTGC TTTTGAACTCTTTAA TERM 905 984325 - 984315 - g 70 -5.4 -4.33105 | GAATTATGAGCAAAA TAGC GGA GCTA AAAACTTGGTATGAA plsC 983720 - 984367 + | glycerol-3-P acyltransferase argS 984373 - 986061 + | arginyl-tRNA synthetase murA 987398 - 986064 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 906 986127 - 986163 + g 81 -6.7 -4.66537 | AGAGTTTAACTTCTC TACCCAATTATAATATC CTC GATCTAACAATTGGGTA TTTTCTATTAAGGAG TERM 907 986682 - 986642 - G 71 -3.9 -4.83615 | overlap 986643 CATTTTCTACAAAAA CGCGTCCTCCGGTAAGG ACTGCAG CCATACCAAATGATGCG GCTTCTATCTTATCA ebp13 987631 - 990369 + | hypothetical protein TERM 908 990413 - 990372 - T 77 -5.3 -4.86731 | opp_overlap 990372 990372 990373, overlap 990373 990374 TCTTCCTAAATAAAA CCTTCTAAGGCTTTTTTAT TATT ATAAAAAAGCCTTAGGCCA TGTTGTGATAAACCT TERM 909 990411 - 990374 - T 75 -10.1 -2.70452 | opp_overlap 990373 990372 990372, overlap 990373 990372 TTCCTAAATAAAACC TTCTAAGGCTTTTTTAT TATT ATAAAAAAGCCTTAGGC CATGTTGTGATAAAC CF0838 991122 - 990406 - | hypothetical protein TERM 910 991043 - 991061 + g 77 -6 -4.52047 | overlap 991031 991044 AGTTCTTTTATCGTT CGGGAAAA GAT TTTTCCCC TTTTATGATCTGCTC TERM 911 991044 - 991060 + g 75 -9.5 -3.30505 | overlap 991031 991043 GTTCTTTTATCGTTC GGGAAAA GAT TTTTCCC CTTTTATGATCTGCT CF0839 991660 - 991109 - | hypothetical protein yhhY 992211 - 991699 - | amino group acetyl transferase prfB 993155 - 992208 - | peptide chain release factor 2 TERM 912 993093 - 993078 - GH 86 -2.5 -5.82316 | opp_overlap 993079, overlap 993079 ATCATTTAAAAAAAA GGTCA GGTTAT CGACC TTACTTTTAAAGTTT TERM 913 993284 - 993271 - gH 70 -8.1 -3.27525 | opp_overlap 993259 993271, overlap 993282 CCCGGCTAAAGCCAA GCCTG TAAT CAGGC TCTCTAACCGTTTGT prfB 993134 - 993328 + | peptide chain release factor 2 TERM 914 993612 - 993596 - g 76 -2.3 -5.49729 | AATGAGTCAAAAAAA CAAAAAC TCT GCTTTTA TGAACCCCGTCAATG swiB 993582 - 993845 + | swiB complex protein TERM 915 993893 - 993872 - f 77 -10.1 -3.01712 | GGCTCTTTTTCAAGA TCCTCGTCC TCAA GGGCGAGGA GAAAATGTATTTATA pph1 993917 - 994891 + | phosphohydrolase ispD 994881 - 995519 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ycjU 997065 - 996265 - | phosphoglycolate phosphatase truA 995516 - 996322 + | tRNA pseudouridine synthase A TERM 916 996486 - 996476 - Gf 73 -5.4 -4.63218 | CCTTCTTGAACAAAA GCTT GGT AAGC GTATTGATAACTATC TERM 917 997541 - 997524 - g 89 -9.9 -4.27441 | opp_overlap 997522, overlap 997520 ATTACTATCAACAAA GCATCTC TCTG GAGATGC GGCTATTTTATTTAC CF0848 997084 - 997788 + | hypothetical protein TERM 918 998079 - 998057 - g 87 -3.4 -5.75342 | opp_overlap 998057 TCTCCTTAAAAAAAA GAAAGGCT TTTTCTT AGCCATTC TTGATCTCACAGAAA CF0849 997998 - 998345 + | hypothetical protein TERM 919 999314 - 999362 + G 72 -8.3 -3.61268 | gap 1, overlap 999315 999319 AAATTATGCGTTTGC ATGGAGGTGACATTCGCG-TAG ACAATG CTAATGCGAAAGTCACCTTCAC TTTAAAACTTCCCTA TERM 920 999315 - 999361 + G 81 -11.8 -2.7644 | gap 1, overlap 999314 999319 AATTATGCGTTTGCA TGGAGGTGACATTCGCG-TAG ACAATG CTAATGCGAAAGTCACCTTCA CTTTAAAACTTCCCT TERM 921 999319 - 999357 + G 72 -9 -3.28269 | gap 1, overlap 999315 999314 ATGCGTTTGCATGGA GGTGACATTCGCG-TAG ACAATG CTAATGCGAAAGTCACC TTCACTTTAAAACTT atoS 998326 - 999378 + | nitrogen regulation two-component sensor histidine kinase ntrB incA2 1002432 - 999394 - | inclusion membrane protein TERM 922 1002164 - 1002145 - G 70 -9.4 -2.73875 | overlap 1002147 CCGTGTCGAACAGTA TAGTAACG CACT CGTTACTA GTAAAACGCTACCAA TERM 923 1003102 - 1003091 - g 79 -5.8 -4.84642 | TCTAAAGCAAGAAAA GCTG CTGA CAGC GCGGCAAACATCTTT TERM 924 1003140 - 1003156 + G 93 -9.5 -4.90266 | GAGAATCTGGGTGCG GGAAAGA AGT TCTTTCC TTTTTCATTCATAGG TERM 925 1003541 - 1003574 + G 73 -8.4 -3.67558 | gap 1, opp_overlap 1003559 1003567, overlap 1003553 1003561 AATGTTATCCCTCTC TATCTTCC-TCCTTT AAGAG AGAGGAAGGAAGATA TTCTTCCCCTCTCTC TERM 926 1003553 - 1003591 + G 72 -9.7 -2.93073 | opp_overlap 1003559 1003567, overlap 1003541 1003561 CTCTATCTTCCTCCT TTAAGAGAGAGGAAGGA AGATA TTCTTCCCCTCTCTCAA TACTTCTTAGAAAAG TERM 927 1003589 - 1003559 - g 81 -11.2 -3.01712 | opp_overlap 1003541 1003553 1003561, overlap 1003567 CTTCCTCCTTTAAGA GAGAGGAAGGAAGA TAT TCTTCCCCTCTCTC AATACTTCTTAGAAA TERM 928 1003581 - 1003567 - g 70 -8.6 -3.37895 | opp_overlap 1003541 1003561 1003553, overlap 1003559 TTTAAGAGAGAGGAA GGAAGA TAT TCTTCC CCTCTCTCAATACTT TERM 929 1003652 - 1003638 - g 74 -4.3 -4.84761 | overlap 1003627 1003640 ACAGGCCGATAAAAA CACTT TCGGC AAGTG CCAAAGCCGCGCTGC atoC 1002617 - 1003777 + | nitrogen regulation two-component transcription regulatory protein TERM 930 1004001 - 1004021 + F 77 -4.7 -5.14894 | opp_overlap 1004001 CCCTCCTATAATAAC GAATAGGAG AAT CTCTTTTTC TTTTTCTGATTTTTT TERM 931 1004729 - 1004710 - gf 70 -2.8 -5.01553 | overlap 1004711 1004714 AATCCACAAACAAAA CGACGACA ATTA TGTCCTCA TCGAACCTATTATCT CF0853 1004081 - 1004767 + | hypothetical protein TERM 932 1004915 - 1004941 + GTF 72 -8 -3.38812 | opp_overlap 1004922, overlap 1004913 CTCTTTGATTATTGT GGAAAAAGGGCT CAA AACCCTATTTCC TCTTCTTACACGCAA TERM 933 1004934 - 1004922 - gTf 73 -5.5 -4.58663 | opp_overlap 1004915 1004913 ATTATTGTGGAAAAA GGGCT CAA AACCC TATTTCCTCTTCTTA CF0854 1004721 - 1005293 + | hypothetical protein TERM 934 1005349 - 1005333 - gT 71 -3 -5.16237 | overlap 1005335 AATTGCATTAAAAAA TCTTCC TCTGG GGAAAA ACCACTGTGTAACTA CF0856 1006479 - 1005991 - | hypothetical protein recO 1005298 - 1006041 + | DNA repair protein RecO TERM 935 1006305 - 1006319 + gF 79 -8.6 -3.75465 | CTAACGAAGTCAGCT CAGGAT ACC ATCCTG TTAATTTTGCTCTTA TERM 936 1006411 - 1006427 + gF 70 -7.3 -3.74224 | opp_overlap 1006401, overlap 1006400 GAAATGCACACGCTT TTTACGC TGT GCGTGAA TTTCCATAGTTTCCA CF0857 1006863 - 1007657 + | hypothetical protein lysM 1008973 - 1007882 - | LysM motif-containing protein CF0858 1007647 - 1007958 + | hypothetical protein TERM 937 1008921 - 1008907 - Gf 84 -3.6 -5.69379 | ACAGAAGTAAAAAAA CAATAT TTA ATACTG CACTTAAAATTAATG TERM 938 1009773 - 1009753 - g 79 -6.9 -4.56597 | TTTGCTGTGTAAAAA TTTCTGGAG TAT CTTCAGAAA CCTCTCCCCAAGAGC pheT 1009080 - 1011464 + | phenylalanyl-tRNA synthetase subunit beta CF0861 1011461 - 1012432 + | hypothetical protein ada 1012447 - 1012974 + | methylated-DNA--protein-cysteine S-methyltransferase oppC1 1014704 - 1012971 - | ABC transporter of peptides oppB1 1016186 - 1014708 - | ABC transporter of peptides TERM 939 1015640 - 1015665 + g 73 -5.6 -4.61527 | gap 1, opp_overlap 1015646, overlap 1015644 CTATATCTTCTTCGG CAAGCAGCTTT ACAAG AAAGCTG-TTG TTTTTAGAAACTTTT TERM 940 1015644 - 1015662 + g 78 -7.5 -4.40963 | opp_overlap 1015646, overlap 1015640 ATCTTCTTCGGCAAG CAGCTTT ACAAG AAAGCTG TTGTTTTTAGAAACT oppA1 1018288 - 1016168 - | ABC transporter periplasmic oligopeptide binding lipoprotein component TERM 941 1016805 - 1016827 + g 71 -4 -4.93365 | overlap 1016807 1016808 CGTATAGCTTCTTCC GGGGAGTGGT GCC ACCCCTCTAC TTTTTGATTATAGGC TERM 942 1016888 - 1016861 - G 70 -5.6 -4.32233 | gap 1, overlap 1016854 AGAAAAAGGCGAAAA CGGTC-CGCTGAT TAC ATGAGCACGACCG TCTAGACATTCTTCT TERM 943 1018305 - 1018295 - H 71 -5.4 -4.55287 | TTTATTCATATAAAA CAGA TCC TCTG CCAAAGACTATTAAA CF0866 1018376 - 1018594 + | hypothetical protein TERM 944 1018796 - 1018808 + T 71 -6.3 -4.24963 | opp_overlap 1018795 1018796, overlap 1018799 AATAAAACGAAAAAT CCTTT TGA AAAGG TTTTAAATAATTGTC TERM 945 1019165 - 1019150 - T 93 -10.4 -3.99324 | opp_overlap 1019150 TTTTACGACGAGAAA CAGGGG GGCC CCCCTG TTTCCTCAACACAAG TERM 946 1019150 - 1019165 + T 87 -10.4 -3.72576 | opp_overlap 1019150 TTTTACGACGAGAAA CAGGGG GGCC CCCCTG TTTCCTCAACACAAG TERM 947 1019913 - 1019880 - T 71 -3.3 -5.04325 | gap 1, opp_overlap 1019904 1019909, overlap 1019874 1019895 1019909 TTGAAATCATAAAAA GGATCTTCTTAAAAAC CGT GTATCTAA-AAGACCC TTACAAGAGTCTTTT TERM 948 1020243 - 1020223 - T 95 -12.7 -3.71487 | opp_overlap 1020223 1020226, overlap 1020226 CATTACACTGAATAA GAAGAGTCA CTT TGACTCTTC TTTCTGCTGTGGCAA TERM 949 1020223 - 1020243 + T 100 -12.7 -4.0162 | opp_overlap 1020223 1020226, overlap 1020226 CATTACACTGAATAA GAAGAGTCA CTT TGACTCTTC TTTCTGCTGTGGCAA TERM 950 1020226 - 1020240 + T 85 -8.6 -4.1337 | opp_overlap 1020223 1020226, overlap 1020223 TACACTGAATAAGAA GAGTCA CTT TGACTC TTCTTTCTGCTGTGG TERM 951 1020240 - 1020226 - T 82 -8.6 -3.98378 | opp_overlap 1020226 1020223, overlap 1020223 TACACTGAATAAGAA GAGTCA CTT TGACTC TTCTTTCTGCTGTGG CF0867 1020558 - 1020229 - | hypothetical protein CF0868 1021619 - 1020612 - | hypothetical protein TERM 952 1021376 - 1021363 - G 93 -8.1 -5.42862 | AGATTTTCAAAAAAA TCGGG TTTC CCCGA CAGTATATACATACG TERM 953 1021888 - 1021913 + G 87 -8.3 -4.53765 | GTGTTGCTAAAGTTC TCCCCCAGTAC AACT GTATTGGTGGA TTTTCTCCTATATAT TERM 954 1022354 - 1022331 - g 81 -7.6 -4.60889 | opp_overlap 1022331, overlap 1022321 AAGCATTGTGAAAAA TCTTTCAAAA CAAT TTCTGAAAGA TTACCTAATATAGAA hemH 1021716 - 1022672 + | ferrochelatase fliY 1023429 - 1022677 - | ABC transporter TERM 955 1023582 - 1023560 - R 70 -2 -5.30575 | overlap 1023561 CAAAAAGCGAAAAAA GTGTTTATCA AAA CAAAAAACAC ACCAGCTGTTTAATG rrm12 1024186 - 1023623 - | tRNA/rRNA methyltransferase CF0872 1024926 - 1024183 - | hypothetical protein glgC 1026366 - 1025038 - | glucose-1-phosphate adenylyltransferase TERM 956 1026527 - 1026501 - R 70 -3.8 -4.96845 | opp_overlap 1026526 ATAAAAACAAACAAA TGCAATTACAAA TTT TTTATAAGCGCA GAGGCCATGGCCGCA pyrF 1027126 - 1026506 - | orotate phosphoribosyltransferase TERM 957 1026683 - 1026670 - G 72 -4.5 -4.67982 | opp_overlap 1026658, overlap 1026665 GTCTATCCAAGAAAA CCAAG GATT CTCGG ATATTTAAACCCTCA CF0875 1027188 - 1027448 + | hypothetical protein TERM 958 1027514 - 1027491 - T 83 -11.2 -2.70932 | CCCTTTTCCCAATGA GTTGATAGAT ATCC ATCTATCAAC TCAACAAAAAGAGTA rho 1029101 - 1027707 - | transcription termination factor Rho TERM 959 1028059 - 1028075 + g 73 -7.3 -4.03413 | ATATTTCTGGCGGCT CCGAAGA ATC TCTTTGG TTTATGTAGAGCGCT TERM 960 1028818 - 1028831 + g 79 -6.7 -4.55128 | opp_overlap 1028813 CCAATTAGAAGCTCA TCGGA ACGC TCCGA TTTTGCTTTAACAAT coaE 1029706 - 1029098 - | dephospho-CoA kinase polA 1032309 - 1029700 - | DNA polymerase I TERM 961 1031385 - 1031372 - G 74 -3.8 -5.10767 | overlap 1031366 TACCCAACAGAAAAA GGGA CTTTTT TCCC ATGTAAAGTAGGTAG sppA 1033356 - 1032340 - | periplasmic serine proteases IV TERM 962 1032638 - 1032612 - G 73 -7.4 -4.08064 | overlap 1032613 AACGTGCGCCCAAAA CGCTAACCAA TTTATCT TTGGTTAGCA GCGGTCGATTCGTTA TERM 963 1033430 - 1033443 + r 73 -8.1 -3.63805 | opp_overlap 1033430 1033432 AAATATGAATAAAAA GGGCT TAAA AGCCC TTTAAACTATAGAGT TERM 964 1033443 - 1033430 - R 90 -8.1 -5.20606 | opp_overlap 1033430, overlap 1033432 AAATATGAATAAAAA GGGCT TAAA AGCCC TTTAAACTATAGAGT adt2 1035099 - 1033450 - | ADP/ATP translocase TERM 965 1034633 - 1034616 - G 81 -11.3 -3.03085 | opp_overlap 1034614, overlap 1034610 1034613 GAGTTGAAAGAACTA CGGAGCT CCAA AGCTCCG ACATTACGTAGTAAA pgsA1 1035841 - 1035335 - | CDP-diacylglycerol/glycerol-3-P phosphatidyltransferase TERM 966 1035497 - 1035481 - G 73 -5.9 -4.62783 | GAGCCACTGTAAAAA TCTTTCC AAA GAAAAGA GCTCGGTAATCGTAT TERM 967 1036627 - 1036644 + G 75 -2.7 -5.29716 | opp_overlap 1036627, overlap 1036633 TAATCTAGCAGCAAA TCAGCTT AATG AAGATGA TTTTTATTATCTTGA TERM 968 1037268 - 1037279 + G 86 -4.4 -5.36441 | GCTTTCAAAGCCGAC TTCC TATA GGAA TTTTTTCTCTAGAGA dnaB 1036469 - 1037920 + | replicative DNA helicase TERM 969 1038437 - 1038448 + G 70 -5.8 -4.34402 | overlap 1038424 1038422 GCTGGGCACGCAGGT TGCG AGGC CGCA TTTTGCTCTGCAAAA gidA 1038380 - 1040215 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA lplA1 1040202 - 1040906 + | lipoate protein ligase A ndk 1041344 - 1040919 - | nucleoside diphosphate kinase ruvA 1042037 - 1041414 - | Holliday junction DNA helicase motor protein TERM 970 1041758 - 1041744 - G 71 -7.2 -3.79874 | opp_overlap 1041742 1041741 1041744 CGCTATAGAACATAA TTTGCT AAG AGCAAA TGTATTTAAAATTGC ruvC 1042543 - 1042037 - | Holliday junction resolvase CF0888 1043614 - 1042658 - | hypothetical protein ebp14 1044939 - 1044115 - | hypothetical protein gapA 1045959 - 1044952 - | glyceraldehyde 3-phosphate dehydrogenase rplQ 1046427 - 1045999 - | 50S ribosomal protein L17 TERM 971 1046176 - 1046199 + g 78 -7.5 -4.42974 | overlap 1046174 ATCGCCGGCCTTAGC TTGACGAGC TTCTTT GCTTGTCAA TTTATTGTATCTAAC rpoA 1047566 - 1046436 - | DNA-directed RNA polymerase subunit alpha TERM 972 1046859 - 1046842 - G 74 -4.9 -4.83169 | gap 1, overlap 1046843 1046848 ATTTGTGTAGAAAAA GCC-AAAG CCT CTTTAGGC GATACCCTACCATCT TERM 973 1047420 - 1047434 + g 72 -8.6 -3.5241 | opp_overlap 1047410 1047420, overlap 1047418 CAAAGCATTACCCAA GGTATG ACC CATACC TCTTTCTAGAGGCTC rps11 1047985 - 1047587 - | 30S ribosomal protein S11 rpsM 1048374 - 1048006 - | 30S ribosomal protein S13 secY 1049803 - 1048430 - | preprotein translocase subunit SecY TERM 974 1048711 - 1048727 + g 71 -3.8 -4.98531 | CTTGTCGAATTCCGG GAATAA AGGCG TTATTC TTTTTCATTTCAGAG rplO 1050262 - 1049828 - | 50S ribosomal protein L15 rpsE 1050752 - 1050255 - | 30S ribosomal protein S5 rplR 1051139 - 1050768 - | 50S ribosomal protein L18 rplF 1051713 - 1051162 - | 50S ribosomal protein L6 rpsH 1052146 - 1051745 - | 30S ribosomal protein S8 TERM 975 1052096 - 1052079 - G 71 -6.3 -4.15664 | opp_overlap 1052084 AAATCCACATATAAA TGCTCTG CTTT CAAAGCA TTTCGGATTCGTGTT rplE 1052706 - 1052164 - | 50S ribosomal protein L5 rplX 1053049 - 1052708 - | 50S ribosomal protein L24 rplN 1053432 - 1053064 - | 50S ribosomal protein L14 rpsQ 1053718 - 1053467 - | 30S ribosomal protein S17 rpl29 1053929 - 1053711 - | 50S ribosomal protein L29 TERM 976 1053750 - 1053765 + g 76 -3.3 -5.20333 | TTCTTGTTTGACCGT CATAG ATCGAG CTATG TTTTTCTTATACATA rplP 1054351 - 1053935 - | 50S ribosomal protein L16 rpsC 1055049 - 1054378 - | 30S ribosomal protein S3 rplV 1055393 - 1055058 - | 50S ribosomal protein L22 TERM 977 1055302 - 1055287 - G 70 -3.3 -4.91712 | opp_overlap 1055277 1055274 TTTAATTGAGAAAAA CTCAA TTGCTT TTGAG CTTCCATAACACTTA rpsS 1055678 - 1055412 - | 30S ribosomal protein S19 rplB 1056538 - 1055684 - | 50S ribosomal protein L2 rplW 1056900 - 1056565 - | 50S ribosomal protein L23 rplD 1057591 - 1056917 - | 50S ribosomal protein L4 TERM 978 1057579 - 1057569 - G 82 -4 -5.42259 | TTATTCCCAAAAAAA TCAA ACT TTGA TAATAAAACCATTAG rplC 1058273 - 1057608 - | 50S ribosomal protein L3 TERM 979 1058384 - 1058367 - R 85 -8.5 -4.12198 | opp_overlap 1058377, overlap 1058357 1058373 TAGAATTCCCTAAAA GGAAAAG GAAC CTTTTCC TTAAGAAAATAAAGG TERM 980 1058384 - 1058373 - R 70 -4.4 -4.67038 | opp_overlap 1058377, overlap 1058367 TCCCTAAAAGGAAAA GGAA CCTT TTCC TTAAGAAAATAAAGG TERM 981 1058535 - 1058511 - R 100 -13.7 -6.08342 | opp_overlap 1058511 TAATAAATAAAAAAA TCGCTTCTAGA AAA CCTAGAAGCGA TTTACAAGATTATCT TERM 982 1058511 - 1058535 + r 95 -13 -3.58801 | opp_overlap 1058511 TAATAAATAAAAAAA TCGCTTCTAG AAAAC CTAGAAGCGA TTTACAAGATTATCT CF0914 1059545 - 1058571 - | hypothetical protein fmt 1060662 - 1059655 - | methionyl-tRNA formyltransferase lpxA 1061449 - 1060610 - | UDP-N-acetylglucosamine acyltransferase TERM 983 1060784 - 1060801 + gr 79 -4.9 -5.01732 | gap 1, opp_overlap 1060784 AGCTTCGGAAAAACT GTCT-TCG GAA CGATAGAC TTTTTTAAACACCTT fabZ 1061923 - 1061459 - | (3R)-hydroxymyristoyl-ACP dehydratase lpxC 1062780 - 1061938 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase lnt 1064435 - 1062810 - | apolipoprotein N-acyltransferase yciA 1064913 - 1064443 - | acyl-CoA thioester hydrolase TERM 984 1064487 - 1064499 + g 76 -3.3 -5.19328 | TACGCTGATCAGCTT CATCG TAT CGACG TTTTTCTTCTGGAGT TERM 985 1064931 - 1064920 - R 70 -4.4 -4.81083 | CTTAAGCATTAAAAA TTCC CCCG GGAA GAGATAACACTCCCA dnaQ2 1065821 - 1065072 - | DNA polymerase III subunit epsilon TERM 986 1065333 - 1065350 + g 73 -8.5 -3.72893 | opp_overlap 1065329 ATGTTTGAAAATGTT GATGTTG ATCT CAACATC TTTCATAGCGCGATG CF0922 1066292 - 1065831 - | hypothetical protein ebp15 1066993 - 1066271 - | hypothetical protein TERM 987 1067245 - 1067222 - H 70 -3.8 -5.02074 | gap 1, opp_overlap 1067222 GTATTGTTGAAAAAA TTGC-CCGGGC TAT GCCTAGAGCAA CTTATTCCAGTTTCA TERM 988 1067698 - 1067714 + H 73 -8.1 -3.63707 | TAGACGGGTTTTTCT CTTTTTC TTT GAAAAAG TTTCCGAATTGTGTT trxA3 1067887 - 1068195 + | thioredoxin rrm13 1068662 - 1068192 - | tRNA/rRNA methyltransferase TERM 989 1068609 - 1068642 + g 75 -9.8 -3.29511 | gap 1 AGCTACACAAGTTCT TCCT-ATATTCCCCG TATTC TGGGGAATATCAGGA TTATAAAGAACTACC mip 1069426 - 1068659 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 990 1068697 - 1068714 + g 73 -8.5 -3.78409 | overlap 1068689 1068691 CTGTATTTTTTGTAG CTACAGA ATCT TCTGTAG TTTCAATTAAATTAA TERM 991 1069077 - 1069087 + g 75 -5.4 -4.70353 | AATTTTTCAGCTAGG GAGA GAT TCTC TTTTGCTTTATTCTC aspS 1071256 - 1069502 - | aspartyl-tRNA synthetase TERM 992 1070702 - 1070682 - GR 70 -2.6 -5.04325 | gap 1 GGCAAAGCATAAAAA CTGCCAGGA TATA TCCTAG-AG GGCACAAGGTAATCC hisS 1072523 - 1071231 - | histidyl-tRNA synthetase CF0929 1072792 - 1072592 - | hypothetical protein TERM 993 1072650 - 1072631 - G 71 -5 -4.48877 | opp_overlap 1072633, overlap 1072633 1072645 TAAAGATTCACAAAA GAGAGGTT CTAT AACCTCTT GTCGAGGAAAGCTGC TERM 994 1072648 - 1072633 - G 71 -7.6 -3.83791 | opp_overlap 1072633, overlap 1072631 1072645 AAGATTCACAAAAGA GAGGTT CTAT AACCTC TTGTCGAGGAAAGCT TERM 995 1072937 - 1072957 + H 72 -2.5 -5.26875 | TATTTATGCGTACTA CAGGGGACT ATT ACTCTCTTG TTTTTTCATTGCCCA TERM 996 1073127 - 1073114 - g 74 -3.9 -5.09895 | GAGTTAGTCAAAAAA CAATA CAAG TATTG GAGAATTCGAATCTT TERM 997 1074224 - 1074205 - g 71 -4.2 -4.86001 | gap 1, opp_overlap 1074205 1074216 1074216 1074218, overlap 1074206 ATTATCTCATAAAAA GGCT-GCGG GTA CCGCTAGCG GTTTCGCTGGCTGGT TERM 998 1074216 - 1074238 + G 77 -7.7 -4.20834 | gap 1, opp_overlap 1074206 1074205, overlap 1074205 1074216 1074218 AAAAGGCTGCGGGTA CC-GCTAGCG GTTT CGCTGGCTGG TTTGCTTATTTTGGA TERM 999 1074218 - 1074235 + G 70 -9.1 -3.09562 | opp_overlap 1074206 1074205, overlap 1074205 1074216 1074216 AAGGCTGCGGGTACC GCTAGCG GTTT CGCTGGC TGGTTTGCTTATTTT uhpC 1073036 - 1074406 + | hexosphosphate transport TERM 1000 1074691 - 1074679 - g 70 -3.3 -4.96657 | overlap 1074680 AGAAAGAGAAGAAAA GTCGC GTA GCGAA TCACCTCATTCTTTT TERM 1001 1075004 - 1074979 - g 74 -4 -5.14563 | TGTCCGAGGAAAAAA TAGCCTCTCT AGGTGA AGAATGGCTA AAGCATGAGTATCAC TERM 1002 1076549 - 1076535 - g 71 -7.2 -3.95036 | AAGCATGGTAAAGAA GTCATA ACC TATGAC CACCCGCTTATAGAA TERM 1003 1077434 - 1077448 + G 75 -10 -3.07431 | opp_overlap 1077425 1077434 TATATATCTAACGGA GCATCC TAT GGATGC TGTTAAAGATATTTT TERM 1004 1077448 - 1077434 - g 72 -10 -2.56571 | opp_overlap 1077434, overlap 1077425 TATATATCTAACGGA GCATCC TAT GGATGC TGTTAAAGATATTTT TERM 1005 1078140 - 1078113 - g 87 -8.6 -4.56775 | gap 1, opp_overlap 1078126 AGCGGTCTTCAAAAA GAACTGGAAAGTT CCC AACTTCCC-GTTC GGCTTGTGGCAGTTT dnaE 1074432 - 1078157 + | DNA polymerase III subunit alpha CF0932 1079038 - 1078154 - | hypothetical protein TERM 1006 1079075 - 1079046 - H 78 -2.4 -5.60993 | opp_overlap 1079038 1079050, overlap 1079047 1079048 TTTCTCATAAAAAAA CCTTTTTATTTA TTTTAC TAAATAAAAAAA TGTTTTATCAAACAA TERM 1007 1079089 - 1079076 - H 93 -3.9 -5.99154 | overlap 1079078 TACTAAATAAAAAAA TGTTT TATC AAACA AAAAAAATATATTTT TERM 1008 1079185 - 1079201 + H 72 -5.9 -4.27796 | opp_overlap 1079199, overlap 1079199 GTCATAGCTTCATGC CGGATTT ATG AAATCTG TTTTACAGTTTGTTG TERM 1009 1079199 - 1079209 + G 75 -5.4 -4.72617 | opp_overlap 1079199, overlap 1079185 CCGGATTTATGAAAT CTGT TTT ACAG TTTGTTGTTTTATCA TERM 1010 1080041 - 1080031 - g 79 -5.4 -4.91109 | CTTTTATGAGAAAAA GAAG AAG CTTC ATGCCGCAAGTATTT CF0933 1079192 - 1080148 + | hypothetical protein TERM 1011 1080689 - 1080699 + G 73 -8.2 -3.81 | opp_overlap 1080687 1080689 ATGAGGCTATTAAGA GCGC CTG GCGC TTATTATACGCTCAT CF0934 1080160 - 1080759 + | hypothetical protein rsbW 1080746 - 1081171 + | regulator of sigma subunit-histidine kinase CF0936 1081595 - 1081173 - | hypothetical protein TERM 1012 1082297 - 1082283 - g 75 -10 -3.05596 | opp_overlap 1082272 1082271 1082282 1082281, overlap 1082270 1082271 1082285 CAGCGCGTGATTTAA CACGCA TTA TGCGTG AGTGTTTAAAAGAGC dacF 1081706 - 1083007 + | penicillin-binding protein 5 CF0938 1083086 - 1083448 + | hypothetical protein rrm14 1084572 - 1083457 - | tRNA/rRNA methyltransferase TERM 1013 1084053 - 1084074 + g 71 -7.3 -3.85698 | opp_overlap 1084049 1084072 CGCGATGAAACGCTG CGCTATGCT GCAA AGGATAGCG TTTATCAAAACGCAG TERM 1014 1084414 - 1084402 - G 70 -7.7 -3.63341 | AAGAGTCTCTAACAA TCGTC GGT GACGA AGGATCGCGAAAATA CF0940 1085849 - 1084695 - | hypothetical protein CF0941 1087185 - 1085941 - | hypothetical protein ebp16 1088573 - 1087197 - | hypothetical protein TERM 1015 1089011 - 1088961 - R 83 -7.1 -4.67038 | gap 1, opp_overlap 1088975 1088977, overlap 1088962 1088965 TCTGGAAAAGCAAAA CGCACTTTATTACAGAGAAGCCTT GAAC AGGGATTCTCTGTAATAAAG-ACT TAGAAAATTTTACCC TERM 1016 1089010 - 1088962 - R 85 -10.6 -3.395 | gap 1, opp_overlap 1088975 1088977, overlap 1088961 1088965 CTGGAAAAGCAAAAC GCACTTTATTACAGAGAAGCCTT GAAC AGGGATTCTCTGTAATAAAG-AC TTAGAAAATTTTACC TERM 1017 1089008 - 1088965 - R 100 -15.6 -2.84272 | opp_overlap 1088975 1088977, overlap 1088962 1088961 GAAAAGCAAAACGCA CTTTATTACAGAGAAGCCTT GAAC AGGGATTCTCTGTAATAAAG ACTTAGAAAATTTTA pgk 1090232 - 1089021 - | phosphoglycerate kinase TERM 1018 1089821 - 1089808 - G 74 -4.5 -4.99035 | TCATTCACATAAAAA TCCCC ATAA GAGGA AAGTTCAGCGGCAAA TERM 1019 1089926 - 1089914 - G 73 -7.7 -3.85698 | CGCGTCCTGGAGAAA GCTGT GCA ACAGC CTGGCGCGCAACTTC ygo 1091551 - 1090271 - | phosphate permease ebp17 1092232 - 1091558 - | hypothetical protein dppD 1092286 - 1093245 + | ABC transporter of dipeptides TERM 1020 1093334 - 1093314 - g 72 -3.3 -5.06414 | opp_overlap 1093330 GGTTTCGAAGAAAAA CAATAGC AACCAAA GCCATTG ATAATGTTTCTTTCT dppF1 1093238 - 1094206 + | ABC transporter of dipeptides parB 1095082 - 1094243 - | chromosome partitioning protein TERM 1021 1095498 - 1095484 - g 95 -11.4 -4.82901 | opp_overlap 1095484 TTCTTCTTACAAAAA CGGCAG AGT CTGCCG TTTGTCAAGGTTTCA TERM 1022 1095484 - 1095498 + G 90 -11.4 -3.91072 | opp_overlap 1095484 TTCTTCTTACAAAAA CGGCAG AGT CTGCCG TTTGTCAAGGTTTCA TERM 1023 1095903 - 1095923 + G 74 -9.1 -3.49475 | CTCAAAACTTTGCCT CTGTTCAAG GAA TTTGAACAG TTCTATAAAGATGGA CF0949 1095324 - 1095977 + | hypothetical protein TERM 1024 1096452 - 1096470 + G 100 -13.2 -3.84451 | TCCCTCTTGCACACC GTCTCGCT CCT AGCGAGAC TTTAGCTTTCCAGGA TERM 1025 1096718 - 1096741 + G 76 -2.4 -5.40279 | overlap 1096719 GATCATGTGTGTGAA CGGGTAGT TAAGAAAT ACTACCCC TTTTCTTTTGTTTTG xcd 1096169 - 1096957 + | xylanase/chitin deacetilase csdB 1098181 - 1096961 - | selenocysteine lyase sufB 1099451 - 1098171 - | ABC transporter integral membrane protein sufC 1100220 - 1099453 - | ABC transporter ynhE 1101678 - 1100224 - | cysteine desulfurase activator complex subunit SufB TERM 1026 1100825 - 1100837 + g 74 -4.7 -4.84311 | overlap 1100835 ACAAAATTATATACC CCGCC TTT GCCGG TTTTCTTATCTCCAG TERM 1027 1100900 - 1100879 - G 71 -7.3 -3.80733 | gap 1 TGCACGGTAGAATAA CGCACG-ACG GCT CGTTCATGCG CCACTAATTCTACAA TERM 1028 1100931 - 1100916 - G 72 -9 -3.37464 | opp_overlap 1100915 1100916 1100918 CCACTAATTCTACAA CAGCTG CGTG CAGCTG ATTTGAAGAATATGA TERM 1029 1101817 - 1101773 - R 79 -8.5 -3.84246 | opp_overlap 1101775 1101776, overlap 1101775 1101776 TTTCGAAGCATTAAA GATGGGCGTGAAAGAAAAAGC GAG GCTTGGACTTTCACGCCCGTT TAGAAAAGAATGACA TERM 1030 1101775 - 1101815 + r 95 -13.3 -3.53444 | opp_overlap 1101775 1101773 1101776, overlap 1101776 TCGAAGCATTAAAGA TGGGCGTGAAAGAAAAAGC GAG GCTTGGACTTTCACGCCCG TTTAGAAAAGAATGA TERM 1031 1101815 - 1101775 - R 87 -11.1 -3.50722 | opp_overlap 1101775 1101776, overlap 1101773 1101776 TCGAAGCATTAAAGA TGGGCGTGAAAGAAAAAGC GAG GCTTGGACTTTCACGCCCG TTTAGAAAAGAATGA TERM 1032 1101814 - 1101776 - R 95 -14.6 -2.69951 | opp_overlap 1101775 1101776, overlap 1101775 1101773 CGAAGCATTAAAGAT GGGCGTGAAAGAAAAAGC GAG GCTTGGACTTTCACGCCC GTTTAGAAAAGAATG TERM 1033 1101776 - 1101814 + r 95 -14.6 -2.71924 | opp_overlap 1101776 1101775 1101773, overlap 1101775 CGAAGCATTAAAGAT GGGCGTGAAAGAAAAAGC GAG GCTTGGACTTTCACGCCC GTTTAGAAAAGAATG CF0955 1103030 - 1102023 - | hypothetical protein TERM 1034 1102051 - 1102069 + g 70 -3.1 -5.00616 | opp_overlap 1102053, overlap 1102053 TCCAGCCTACGCTCA AAGTGTC CTGAA GACACTG TTTTTTGCAGCAAAG ftsI1 1106373 - 1103098 - | cell division related penicillin-binding protein TERM 1035 1103661 - 1103630 - G 100 -16.1 -2.64616 | TGCTGACCTATAGCA GTGGCATACAATC CCGAAC GATTGTATGCCAC ATCCTGAGGAATCGC TERM 1036 1105278 - 1105294 + g 70 -8 -3.66844 | GCGGGGATGATGCCA TGGCCA ATATC TGGCCA TTATTAGGATCTAAA CF0957 1106721 - 1106957 + | hypothetical protein omp17 1106966 - 1108144 + | outer membrane protein OmpA TERM 1037 1108183 - 1108209 + F 100 -14.6 -5.95539 | opp_overlap 1108189 CTTTTTGTCCCGCTA TCAGAACCTAGG GCG TCTAGGTTCTGA TTTTTTTATTTCCCC TERM 1038 1108311 - 1108295 - f 70 -4.5 -4.65895 | overlap 1108305 CTCCCTAGCTAAAAA TTTCTAA AAG CTAGAAA GCTAGAGATTACAAT rpsB 1108523 - 1109344 + | 30S ribosomal protein S2 TERM 1039 1109984 - 1109974 - g 78 -4 -5.30616 | opp_overlap 1109974 CTAGCGAAAGAAAAA GAAA TCA TTTC TTCTCAAATACAAGG tsf 1109344 - 1110192 + | elongation factor Ts pyrH 1110208 - 1110930 + | uridylate kinase frr 1110932 - 1111474 + | ribosome recycling factor CF0963 1111882 - 1112400 + | hypothetical protein TERM 1040 1113190 - 1113178 - g 70 -2.7 -5.09225 | AGGGGAGTTAAAAAA TCATA TCT TACGA GCCTTAGGATTACTT karG 1112384 - 1113463 + | ATP:guanido phosphotransferase TERM 1041 1113873 - 1113831 - T 76 -2.8 -5.4833 | gap 1 TGAGGGAATAAAAAA GCCAAGAAAACAACAATCA TACGGC CGAC-GATGTCCTCTTGGC TTTCCCCCTGAAATA yscC 1116675 - 1113949 - | type III secretion general secretion pathway protein D TERM 1042 1115038 - 1115069 + g 70 -8.2 -3.67775 | gap 1, overlap 1115024 CCATTGAATACTATT CAGCGTATTGATGAA GTC TTCATCCATA-GCTG TTGTTACATAGAGAT TERM 1043 1116496 - 1116511 + g 75 -2.6 -5.27335 | gap 1, overlap 1116495 AGCAATTTGATTGTT CTCATCA GCT TGA-GAG TTTTTATTTCGAGGC pkn3 1118177 - 1116672 - | serine/threonine protein kinase TERM 1044 1117592 - 1117609 + g 81 -7.1 -4.614 | opp_overlap 1117592 1117590 AACCCAAAGAATAGA TTTCTGA ATTT TCAGAAA TTTTATCTCCTTGAC fliN 1119310 - 1118195 - | type III secretion system protein TERM 1045 1119233 - 1119213 - G 90 -12.6 -3.64822 | opp_overlap 1119212 1119213 1119213 AGCTCTTTAGGGAAA GGAGGGAG AGAAA CTCCCTCC TCCGTTTTTACTAAA TERM 1046 1119213 - 1119233 + g 83 -12.6 -2.86601 | opp_overlap 1119213, overlap 1119213 1119212 AGCTCTTTAGGGAAA GGAGGGAG AGAAA CTCCCTCC TCCGTTTTTACTAAA ebp18 1120172 - 1119324 - | hypothetical protein TERM 1047 1119932 - 1119952 + g 78 -2.5 -5.45652 | overlap 1119945 CTTCTTGCTCTTCTT CTTTAGAAG ATA CTGCTGAGG TTTTTTCTTCCGCAT CF0969 1120682 - 1120191 - | hypothetical protein fliI1 1122031 - 1120703 - | type III secretion system ATPase TERM 1048 1120916 - 1120932 + g 75 -9.5 -3.36749 | opp_overlap 1120930 TCCTATAATACGTCT TTGTTCC TCA GGAACAA TTGCTGTTAACAATC TERM 1049 1121075 - 1121110 + g 88 -10.6 -4.04206 | gap 1, opp_overlap 1121083 1121084 1121086 GTTCATATCGTCTCC GGCAACAAGCACAGTAT AAA ATGCTGTGATTG-TGCC TTTATCTGAAGCTCC CF0971 1122701 - 1122033 - | hypothetical protein TERM 1050 1122093 - 1122115 + g 82 -10.6 -3.45571 | opp_overlap 1122091 1122094 1122099, overlap 1122094 1122099 AGTTCCTACGATACT AGCAAAGAGC TCA GCTCTTTGCG TTGCTCTTTGAACAG TERM 1051 1122094 - 1122114 + g 93 -14.1 -2.67021 | opp_overlap 1122091 1122094 1122099, overlap 1122093 1122099 GTTCCTACGATACTA GCAAAGAGC TCA GCTCTTTGC GTTGCTCTTTGAACA TERM 1052 1122114 - 1122094 - G 93 -14.1 -2.66316 | opp_overlap 1122094 1122093 1122099, overlap 1122091 1122099 GTTCCTACGATACTA GCAAAGAGC TCA GCTCTTTGC GTTGCTCTTTGAACA CF0972 1123189 - 1122740 - | hypothetical protein TERM 1053 1123047 - 1123067 + g 73 -8.3 -3.74347 | opp_overlap 1123050 AATGCTAATCCCAAT TCATGACCA TAG TGGTCAGGA TTTAAAATTTGTAGA ebp19 1123471 - 1123208 - | hypothetical protein ebp20 1123746 - 1123495 - | hypothetical protein adc 1126318 - 1123793 - | adenylate cyclase TERM 1054 1124325 - 1124365 + g 89 -9.7 -4.15044 | gap 1, opp_overlap 1124321 GTGATCACAAACTCT CCGG-GTTCTGGGGAGTG CATACT CACGCCCTTGAACTCCGG TTTCTTAGACAACAA TERM 1055 1124878 - 1124862 - G 77 -5.1 -4.92756 | opp_overlap 1124862 ATCAGCAAAAATAAA GTTGTTC CTA GAGCAAC AACTTGATTAGAACT TERM 1056 1124899 - 1124913 + g 90 -8.6 -4.99947 | opp_overlap 1124898 1124899 1124901 GATTAGAACTTAAAG TAGAGC TGT GCTCTA TTTTCTTTCCTTCGA TERM 1057 1125711 - 1125724 + g 75 -8.1 -3.97983 | GCGGTAGTTTTTACA TCCCC TAAT GGGGA TTCTGTCTTTTTTTC ebp21 1126784 - 1126338 - | hypothetical protein hemA 1128107 - 1127091 - | glutamyl-tRNA reductase TERM 1058 1127129 - 1127151 + g 81 -2.8 -5.52986 | gap 1, overlap 1127130 GAGAAGTTCGAATCT G-GCTCAAA GATATA TTTGAGCTC TTTTTTTCATAAACT TERM 1059 1127130 - 1127149 + g 74 -6.5 -4.40552 | overlap 1127129 AGAAGTTCGAATCTG GCTCAAA GATATA TTTGAGC TCTTTTTTTCATAAA TERM 1060 1128280 - 1128266 - H 72 -5 -4.7189 | AAAATACAGAGAAAA TAAGAC AAG GCCTTA TCCTAATATTAAGAC TERM 1061 1128477 - 1128458 - H 70 -2.2 -5.36364 | overlap 1128460 1128466 TTAAAAATATAAAAA TCTTAAAC TTTA GTCTAAAA ACTACGTCTATCTTG TERM 1062 1128637 - 1128653 + H 70 -3.7 -4.8622 | opp_overlap 1128640, overlap 1128640 AAACATCGCGCAGTA GAATTCT AAC AGAAGTC TTTTTCCTTAGAACG TERM 1063 1129414 - 1129425 + G 81 -3 -5.62288 | opp_overlap 1129414 ACATGCAGAAACACA TAAC GAAC GTTA TTTTTCTTTTGTTAA TERM 1064 1129478 - 1129452 - g 73 -6.7 -4.183 | gap 1, opp_overlap 1129452 1129473, overlap 1129455 1129457 TTAACGGTCAAGAAA CTA-TAGATGGG GGTA CCCATCTAGCAG CTTTTAAAGAGGCTA TERM 1065 1129474 - 1129455 - g 79 -10.8 -3.10512 | opp_overlap 1129452 1129473, overlap 1129452 1129457 ACGGTCAAGAAACTA TAGATGGG GGTA CCCATCTA GCAGCTTTTAAAGAG TERM 1066 1129472 - 1129457 - g 70 -9 -3.10761 | opp_overlap 1129452, overlap 1129455 1129452 GGTCAAGAAACTATA GATGGG GGTA CCCATC TAGCAGCTTTTAAAG gyrB1 1128689 - 1130497 + | DNA topoisomerase IV subunit B gyrA1 1130501 - 1131940 + | DNA topoisomerase IV subunit A CF0980 1132054 - 1132347 + | hypothetical protein CF0981 1132349 - 1132657 + | hypothetical protein TERM 1067 1132939 - 1132922 - g 77 -8.5 -3.91084 | opp_overlap 1132921 TTATTGTTAATGAAA CTAATCG TGAT CGATTAG ATAAGTTCTTAGTGT TERM 1068 1133053 - 1133041 - g 71 -4.1 -5.0065 | opp_overlap 1133041 CAGGTACAAACAAAA GTTGC TAC ACAAC TAGTTCCTGGAGACT rsuD 1132882 - 1133874 + | ribosomal large subunit pseudouridine synthase D nab2 1133981 - 1134217 + | hypothetical protein TERM 1069 1134268 - 1134317 + F 70 -3.6 -4.92756 | gap 1, overlap 1134270 ATATTTCATCACACT CGATATTCTGTTTCCGCCTGCGG AAGCC CCGCAGGCAAAGA-AGAATAGGG TTTCTTTTTGATCAT CF0984 1134390 - 1134605 + | hypothetical protein aroG2 1134639 - 1135448 + | 2-dehydro-3-deoxyphosphooctonate aldolase CF0986 1135445 - 1135924 + | hypothetical protein TERM 1070 1136005 - 1135986 - g 73 -2 -5.25772 | opp_overlap 1135987 1135989, overlap 1135980 AAAGTATAACAAAAA GCCCGTCA CTAA TGACGTGT CTTTTGAAGTAAATG yhbG 1135939 - 1136661 + | ABC transporter CF0988 1136834 - 1136658 - | hypothetical protein TERM 1071 1136932 - 1136915 - R 74 -5.7 -4.7497 | opp_overlap 1136902 CTGATTTATCAAAAA TCTTATA CTTT TATAAGA AAACTCCTTAACCCA CF0989 1139489 - 1136940 - | hypothetical protein TERM 1072 1139583 - 1139570 - H 80 -2.5 -5.74684 | TAAGAAAAATAAAAA TTTTT AGTT AAAAA GCAGGATAGAAAAAA TERM 1073 1140254 - 1140230 - g 70 -3.6 -4.95806 | gap 1 AAATTATCAGAAAAA CTTCAGTCTGC TGGA GCT-ACTGAAG AAGTTATTAAACAAG CF0990 1139645 - 1142239 + | hypothetical protein TERM 1074 1142254 - 1142276 + T 71 -6.3 -4.19371 | gap 1, opp_overlap 1142247 1142254, overlap 1142257 GATAACTAGTTGAAA TGG-GGAGCC TAAA GGTTCCTCCA TTTCTTCCCCCTTTC TERM 1075 1142449 - 1142475 + T 76 -6.4 -4.56597 | opp_overlap 1142450, overlap 1142450 TCTGAGCATAAAAAA ACCCGCTCTGAG AAA CACAGAACGGGC TTTTTGGAAAACAAA TERM 1076 1142450 - 1142474 + T 81 -9.9 -3.33744 | opp_overlap 1142450, overlap 1142449 CTGAGCATAAAAAAA CCCGCTCTGAG AAA CACAGAACGGG CTTTTTGGAAAACAA TERM 1077 1142474 - 1142450 - T 100 -12.1 -5.67063 | opp_overlap 1142450 1142449 CTGAGCATAAAAAAA CCCGCTCTGAG AAA CACAGAACGGG CTTTTTGGAAAACAA TERM 1078 1142475 - 1142502 + T 76 -6.4 -4.58297 | GAAACACAGAACGGG CTTTTTGGAAAA CAAA TTTTCCTGAAAG TTTCTATTTTTACTG srpA1 1144464 - 1142512 - | wall surface anchor family protein TERM 1079 1142747 - 1142764 + g 70 -5.6 -4.35042 | TTCTGCTTGATTTCT TCCTCA TTCGCC TGAGGA TTATTTTGTAATACG TERM 1080 1144303 - 1144289 - G 70 -2.8 -5.0538 | GCTGAGGCTAAAAAA CTTAAG CGA CCCAAG GTTTTTACCGAAGGT TERM 1081 1144516 - 1144542 + r 84 -6.6 -5.08011 | opp_overlap 1144516 AAAAATAAAAAAAAA GCTCACATCT TTTAATT AGACGTGAGC TTTTTTAAAGATTTT TERM 1082 1144542 - 1144516 - R 100 -8.8 -6.60239 | opp_overlap 1144516 AAAAATAAAAAAAAA GCTCACATCT TTTAATT AGACGTGAGC TTTTTTAAAGATTTT CF0992 1145856 - 1144570 - | hypothetical protein TERM 1083 1145322 - 1145310 - G 73 -7.7 -3.85698 | GTCGGGTTGCATAAA GATGG ATA CCATC AAAATTACTATTAAA nfo 1147612 - 1145966 - | endonuclease IV mviN 1147585 - 1148547 + | endonuclease IV TERM 1084 1148597 - 1148562 - TR 93 -4.6 -5.96894 | opp_overlap 1148565 1148568 1148580 1148595, overlap 1148563 1148565 1148568 AGTGAAAGAAAAAAA TTAGAAGCGCCAGCTA AAGG TAGGCGGCGCCTCTCT TTTTGGAAGAAAGAA TERM 1085 1148596 - 1148563 - TR 81 -8.1 -4.15696 | opp_overlap 1148565 1148568 1148580 1148595, overlap 1148562 1148565 1148568 GTGAAAGAAAAAAAT TAGAAGCGCCAGCTA AAGG TAGGCGGCGCCTCTC TTTTTGGAAGAAAGA TERM 1086 1148594 - 1148565 - TR 89 -10.7 -3.64572 | opp_overlap 1148565 1148568 1148580, overlap 1148563 1148562 1148568 GAAAGAAAAAAATTA GAAGCGCCAGCTA AAGG TAGGCGGCGCCTC TCTTTTTGGAAGAAA TERM 1087 1148591 - 1148568 - TR 79 -8.8 -3.87851 | opp_overlap 1148565 1148568 1148580, overlap 1148565 1148563 1148562 AGAAAAAAATTAGAA GCGCCAGCTA AAGG TAGGCGGCGC CTCTCTTTTTGGAAG rpsD 1149245 - 1148616 - | 30S ribosomal protein S4 CF0996 1149467 - 1150444 + | hypothetical protein TERM 1088 1150469 - 1150510 + TF 78 -10.4 -2.76198 | gap 1, opp_overlap 1150469, overlap 1150465 GGCTGAACAACTAAC TTTA-CCTTGAACTAGGCC TTTTC GGTCTGGTTCAGGGATAAA TGGTATGTGATTTTT recC 1152192 - 1150480 - | ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V gamma TERM 1089 1150532 - 1150560 + gF 93 -9.1 -4.32201 | opp_overlap 1150536 GTGATTTTTTTGCAG GATACTTTCTTAT GTG ATAAGAAAATATC TTTTACATTAATTCC TERM 1090 1151565 - 1151576 + gF 71 -3 -5.09225 | AAAGATCTTTAAAGC TTAC ATAA GTAA TTTTTTGACTGCGAT TERM 1091 1151809 - 1151822 + gF 79 -6.7 -4.56597 | opp_overlap 1151806 TAAAGGCAACATTTC TGGGA GAAT TCCCA TTTTTGCCGGACCAA TERM 1092 1152097 - 1152074 - Gf 77 -9 -3.53444 | GCATTCTCTGTCAAA CTTTTCCCTT CTAG AAGGAAAAAG ACTAAAAGAAACTTG TERM 1093 1152512 - 1152525 + GH 73 -8.1 -3.5241 | opp_overlap 1152510 1152511 1152508 CTACTAAATAACACC CCCTC ACCT GAGGG TATTTCTCAAAGCTC TERM 1094 1152953 - 1152977 + GH 91 -12.9 -2.95298 | opp_overlap 1152957, overlap 1152955 CACTATGTTTTAGCA GATAGGCAAGC CTT GCTTGCCAATC TCTCTCATAAATCCC TERM 1095 1152955 - 1152975 + GH 77 -9.7 -3.02947 | opp_overlap 1152957, overlap 1152953 CTATGTTTTAGCAGA TAGGCAAGC CTT GCTTGCCAA TCTCTCTCATAAATC TERM 1096 1152973 - 1152957 - gH 86 -12.3 -2.94218 | opp_overlap 1152955 1152953 ATGTTTTAGCAGATA GGCAAGC CTT GCTTGCC AATCTCTCTCATAAA TERM 1097 1154024 - 1154049 + GH 73 -7.7 -3.89336 | opp_overlap 1154007 1154041 1154045 CAAGAAGAACTTGTG TTTTCTTCCTC GGAA GATGAAGAAAA TTTCCATTTCCTTCA TERM 1098 1154960 - 1154972 + GH 73 -7.7 -3.89607 | overlap 1154951 TCTCAAGATGCCTTT GAGGA TCT TCCTC TTCCTTTTTCTAATC CF0997 1152191 - 1155259 + | hypothetical protein TERM 1099 1157050 - 1157040 - g 70 -5.4 -4.42974 | opp_overlap 1157029 1157028, overlap 1157029 GTTATAGAGAAGAAA GAGT TCT ACTC TACTTATTTTTTCTC TERM 1100 1157160 - 1157149 - g 75 -5.8 -4.7871 | opp_overlap 1157148 AAGCATTATTAAAAA CTCC ACAA GGAG ATCTTACCTTCCAAG recB 1155246 - 1158383 + | ATP-dependent dsDNA/ssDNA exodeoxyribonuclease V beta mreC 1159410 - 1158343 - | cell division related rod shape-determining membrane protein TERM 1101 1158934 - 1158955 + g 75 -3 -5.20633 | overlap 1158935 AAGACCTACAAGAAC TTTTCCAG ATAACA CTGGAGAG TTTTTCTGTATTTTT TERM 1102 1159364 - 1159350 - G 79 -8.6 -3.96624 | opp_overlap 1159350 TATGTCGACGATAAA CAACAG GAC CTGTTG TTTTTATCGCGGAAC TERM 1103 1159350 - 1159364 + g 88 -8.6 -4.82901 | opp_overlap 1159350 TATGTCGACGATAAA CAACAG GAC CTGTTG TTTTTATCGCGGAAC TERM 1104 1159590 - 1159565 - R 81 -6.1 -5.01845 | opp_overlap 1159568, overlap 1159567 1159568 GATAAGAATTAAAAA CACGCGCAGAC GCCT ATCTGCGCTTA TAATGATCTTTTTTA TERM 1105 1159588 - 1159567 - R 71 -6.5 -4.11092 | opp_overlap 1159568, overlap 1159565 1159568 TAAGAATTAAAAACA CGCGCAGAC GCCT ATCTGCGCT TATAATGATCTTTTT TERM 1106 1159587 - 1159568 - R 77 -10 -3.05029 | opp_overlap 1159568, overlap 1159567 1159565 AAGAATTAAAAACAC GCGCAGAC GCCT ATCTGCGC TTATAATGATCTTTT TERM 1107 1159568 - 1159587 + r 79 -9.3 -3.48981 | opp_overlap 1159568 1159567 1159565 AAGAATTAAAAACAC GCGCAGA CGCCTA TCTGCGC TTATAATGATCTTTT tyrB 1160862 - 1159669 - | aromatic amino acid aminotransferase TERM 1108 1160716 - 1160698 - G 71 -5.3 -4.55887 | TTCTAAAAATAGAAA TTGTGCC TTACG GACACAA GAAAAACCACCGCAA greA 1163164 - 1161011 - | fused transcript cleavage factor/uncharacterized domain-containing protein TERM 1109 1162608 - 1162587 - G 76 -2.4 -5.36441 | gap 1, overlap 1162590 CTTCGAGATAAAAAA TGA-TCCTT ATCTA AAGGAATCA AACTCTTAAAAGCTG ebp22 1163276 - 1163710 + | hypothetical protein TERM 1110 1164117 - 1164105 - g 71 -6.2 -4.20768 | opp_overlap 1164105 ATCTTTAAGAAAGAA GGGC TTTTT GCCC TTTTTAAACAACGTC TERM 1111 1164105 - 1164117 + G 77 -6.2 -4.57073 | opp_overlap 1164105 ATCTTTAAGAAAGAA GGGC TTTTT GCCC TTTTTAAACAACGTC TERM 1112 1164232 - 1164256 + G 73 -7.9 -3.87576 | overlap 1164231 CAGAAAAACATCTCG CCGTCTTTTCT TCC AGAGAAGAAGG TCTTTATGTTTTTAA TERM 1113 1164857 - 1164846 - g 75 -3 -5.26119 | TTCTTAAAAAGAAAA CATA CCTA TATG GATCCAGATACAAAT nqrA 1163733 - 1165148 + | Na(+)-translocating NADH-quinone reductase subunit A hemB 1166159 - 1165164 - | delta-aminolevulinic acid dehydratase SEQUENCE gi|89898813|ref|NC_007900.1| Chlamydophila felis Fe/C-56 plasmid pCfe1, complete sequence (length 7552) TERM 1 383 - 360 - g 81 -6.8 -4.79752 | TTGAACAAGATAAAA TCCTTAACAA GTAC TTGTTCAGGA AAGCCTATTTCTGAG TERM 2 558 - 572 + G 70 -2.8 -5.15634 | GAGTTCATATCTAAG CAAGAG TGG CTGTTG TTTTTTGATGCCCTG pCF01 57 - 1073 + | integrase TERM 3 1129 - 1149 + T 95 -12.7 -3.6715 | opp_overlap 1136 TTAGTTTTATTTTTA GTGGAAATG GAT CATTTCCAC TTTAAGATTAGATAA pCF02 2164 - 1157 - | integrase TERM 4 1545 - 1576 + g 75 -10.4 -3.22924 | opp_overlap 1545 1549, overlap 1548 1556 1560 GTTCCGTTGTCAAAT GAAATTTTATCTGT AGTA ACAGATAAAACTTC TGTTACTCGTTTGGC TERM 5 1576 - 1545 - G 83 -12.6 -2.71712 | opp_overlap 1545 1548 1556 1560, overlap 1549 GTTCCGTTGTCAAAT GAAATTTTATCTGT AGTA ACAGATAAAACTTC TGTTACTCGTTTGGC TERM 6 1572 - 1549 - G 86 -9.8 -4.05788 | opp_overlap 1548 1545 1556 1560, overlap 1545 CGTTGTCAAATGAAA TTTTATCTGT AGTA ACAGATAAAA CTTCTGTTACTCGTT dnaB 2241 - 3644 + | replicative DNA helicase TERM 7 4405 - 4395 - gf 85 -4 -5.68023 | CTACAAGGAAAAAAA TGAA TAG TTCA GGCGTAAAAGAATGG TERM 8 4588 - 4606 + GF 71 -3.9 -4.90778 | GATCCAAGGGAAAAC CATTTCT AAAAA AGAAGTG TTTTATTTAAATAAA pCF04 3617 - 4681 + | hypothetical protein TERM 9 4687 - 4672 - f 74 -6.2 -4.57063 | TCAAAATACAACAAA CAACAA TTAA TTGTTG ATGGGCAAAAAAAAA pCF05 4706 - 5530 + | hypothetical protein pCF06 5485 - 5934 + | hypothetical protein TERM 10 6099 - 6062 - g 90 -8.5 -4.85618 | opp_overlap 6054, overlap 6054 6063 6064 AAATAAGCAAGAAAA GGGTTTTGCTTGTGGAT TTAG ATCCACAAGCAAATCTA ACTACATCCCTTGGT TERM 11 6098 - 6063 - g 89 -12 -3.48931 | opp_overlap 6054, overlap 6054 6062 6064 AATAAGCAAGAAAAG GGTTTTGCTTGTGGAT TTAG ATCCACAAGCAAATCT AACTACATCCCTTGG TERM 12 6097 - 6064 - g 95 -15.5 -2.67732 | opp_overlap 6054, overlap 6054 6063 6062 ATAAGCAAGAAAAGG GTTTTGCTTGTGGAT TTAG ATCCACAAGCAAATC TAACTACATCCCTTG pCF07 5935 - 6744 + | ParA family protein pCF08 6741 - 7481 + | hypothetical protein