TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.585627 %AT, 1066402 nt, 7942 terms. Intergenic: 0.650248 %AT, H2T: 158437 nt, 1077 terms; T2T: 40293 nt, 502 terms; H2H: 54377 nt, 600 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|58021288|ref|NC_002179.2| Chlamydophila pneumoniae AR39, complete genome (length 1229853) CP0001 201 - 1199 + | delta-aminolevulinic acid dehydratase CP0002 2623 - 1220 - | Na(+)-translocating NADH-quinone reductase subunit A CP0003 3122 - 2694 - | hypothetical protein TERM 1 3488 - 3504 + G 71 -2.3 -5.21709 | opp_overlap 3488 TTTTAGATTTGCAAA CATCT AACAGCC AGATG TTTTTTGATATAGCC CP0004 3235 - 5403 + | fused transcript cleavage factor/uncharacterized domain-containing protein TERM 2 6531 - 6544 + G 71 -2.4 -5.18726 | TGCGTAAGGTTGCCG GTCA TACATT TGAC TTTTTATTGTCCCAA TERM 3 6642 - 6620 - g 74 -7.7 -3.9644 | overlap 6622 TTTTTAAGAGAACAA CACGCTGTT TATAC AACAGCGGG AGGAAGAATGAATTT TERM 4 6640 - 6622 - g 73 -8.9 -3.56921 | overlap 6620 TTTAAGAGAACAACA CGCTGTT TATAC AACAGCG GGAGGAAGAATGAAT CP0005 5537 - 6724 + | aromatic amino acid aminotransferase TERM 5 7644 - 7658 + G 100 -10 -4.68908 | GAAGAAAAGCTTATG GAGCTG GAT CAGCTC TTTATTTTACCTCCC CP0006 6714 - 7727 + | hypothetical protein CP0007 10839 - 7687 - | exodeoxyribonuclease V, beta chain, putative TERM 6 7778 - 7765 - G 70 -3.8 -4.81851 | opp_overlap 7765 ATTTAAAGCGAAAAA CCCA TTTCCT TGGG TGTCTATGCCACGGA TERM 7 9273 - 9289 + g 81 -5.1 -5.18715 | opp_overlap 9275, overlap 9275 AGACCAGGACAACCA TATTCCC TAG GGGAATC TTTTGTTCTTTTTGT TERM 8 9275 - 9287 + g 76 -7.7 -4.17151 | opp_overlap 9275, overlap 9273 ACCAGGACAACCATA TTCCC TAG GGGAA TCTTTTGTTCTTTTT TERM 9 10702 - 10739 + g 76 -10 -3.24076 | gap 1, opp_overlap 10683, overlap 10692 10701 10699 10703 TAAGGCATGTTCTAC ATGTGTTAGCGAGCCTT CAATC AAGGCTCGC-AACACGA TCTGTTCTATAGTAA TERM 10 10703 - 10738 + g 91 -13.5 -2.53964 | gap 1, opp_overlap 10683, overlap 10692 10702 10701 10699 AAGGCATGTTCTACA TGTGTTAGCGAGCCTT CAATC AAGGCTCGC-AACACG ATCTGTTCTATAGTA CP0008 13900 - 10826 - | exodeoxyribonuclease V, gamma subunit, putative TERM 11 12865 - 12853 - GH 79 -3.3 -5.28561 | overlap 12842 AAGAGAGAATAAAAA TCTCC TCA GGTGA CACTCCGCGATGCAG TERM 12 13138 - 13166 + gH 82 -3.1 -5.4505 | CAAGAAGTGCTTGCC TGTCTGATAATAC ATA GTGTTCCCAGGCA TTTTTTATTGGGGAG TERM 13 13790 - 13804 + gH 88 -7.2 -4.84527 | opp_overlap 13790 TGCAACAAGAATCCA CCTTTT GGT AAAAGG TTTTTGATGTGTGGA TERM 14 14526 - 14515 - gH 71 -4.4 -4.79451 | opp_overlap 14515, overlap 14510 ATGTGAAACAGAAAA TCAC CTTG GTGA GTTTCAAAGATTTAT TERM 15 15035 - 15052 + GH 80 -2.7 -5.4251 | GGGAAGTAACTTAGG CTTGTCT CCTG AAACAAG TTTTTTCTATATCGG CP0009 13887 - 15596 + | hypothetical protein TERM 16 15768 - 15822 + FH 89 -6.7 -5.58522 | gap 1, opp_overlap 15769, overlap 15744 15769 AGAATTCTATCCTAA ACTTCGTGATCAGAAAATGACTATAT CTAA AGATT-TCAATTTCTGATCACGAAGC TTTTTCTTTTGTCTC TERM 17 15769 - 15821 + FH 93 -10.2 -3.92673 | gap 1, opp_overlap 15769, overlap 15768 GAATTCTATCCTAAA CTTCGTGATCAGAAAATGACTATAT CTAA AGATT-TCAATTTCTGATCACGAAG CTTTTTCTTTTGTCT TERM 18 15821 - 15769 - fH 86 -10.2 -3.61103 | gap 1, opp_overlap 15769 15768 GAATTCTATCCTAAA CTTCGTGATCAGAAAATGACTATAT CTAA AGATT-TCAATTTCTGATCACGAAG CTTTTTCTTTTGTCT CP0011 15917 - 16585 + | uridine kinase CP0012 17641 - 16667 - | hypothetical protein TERM 19 18185 - 18197 + G 75 -9.1 -3.71848 | GCAAAAACAATTTTT GCTGC TCA GCAGC TTGTTGCTCACGGAC rpsD 17858 - 18487 + | 30S ribosomal protein S4 TERM 20 18519 - 18542 + T 100 -7.5 -6.02546 | gap 1, opp_overlap 18519 ATCTTTTCTAGAAAA CGCCA-ACTG TATAT CAGTATGGCG TTTTTTTTGATTTCA TERM 21 18542 - 18519 - T 81 -7.5 -4.37092 | gap 1, opp_overlap 18519 ATCTTTTCTAGAAAA CGCCA-ACTG TATAT CAGTATGGCG TTTTTTTTGATTTCA CP0014 19487 - 18606 - | endonuclease IV TERM 22 18680 - 18697 + g 73 -3.5 -5.00765 | CAGGCCCACCAGGGG TTTCTAA ATAC TTAGGAA TTTTTCTAGTTCGTT CP0015 19998 - 19822 - | hypothetical protein TERM 23 20382 - 20393 + GH 77 -5.8 -4.74215 | TTACTATGATACTCT TGCC CTGT GGCA TTTTCTTAATGATGT TERM 24 20975 - 20999 + GH 93 -10 -4.18494 | TTAGCTTTACCTGGA GTCCGTGTCC TTTAT GAACACGGAC TTTTCCCTCAGAGTG TERM 25 21425 - 21468 + GH 82 -4.7 -5.36441 | gap 1, opp_overlap 21428, overlap 21429 TTAAACCCCCTCACA CCACTTGCTTG-GCCCTTAT CCTCC ATAACGGCTCAAGCAATTGC TTTTTTATCTGAGAG TERM 26 21429 - 21464 + GH 82 -8.5 -4.01646 | gap 1, opp_overlap 21428, overlap 21425 ACCCCCTCACACCAC TTGCTTG-GCCCTTAT CCTCC ATAACGGCTCAAGCAA TTGCTTTTTTATCTG CP0016 19982 - 21625 + | hypothetical protein CP0017 21728 - 22996 + | hypothetical protein TERM 27 23027 - 23051 + F 100 -7.9 -6.60239 | opp_overlap 23026 23027 AATCTTTAAAAACAG GCTCGCATTAA TTA TTAGTGAGAGC TTTTTTTTTATTTTT TERM 28 23582 - 23568 - g 72 -7.8 -3.79747 | overlap 23549 CTACTGATGAGGAAA CCGCAA TCG CTGCGG AGTGGGAAACTAAGA CP0018 23108 - 25063 + | hypothetical protein TERM 29 25142 - 25094 - T 72 -9.1 -2.69151 | gap 1, opp_overlap 25091 25089 25100, overlap 25091 CGTTTGGAGAGATTA TTAT-GTGCTTTGGTAAGGCCT TTGTTG AGGCCTTACCAACACACTAGAA CGATCTTCAATAAAT TERM 30 25386 - 25353 - T 75 -4.7 -4.86902 | gap 1, overlap 25355 TAAAGGAGAAGAAAA GATCCTTTAGGAGCTC TAA AAACTCCTAA-GGATG CAATTAGTTGGAATA TERM 31 25384 - 25355 - T 73 -7.3 -4.03023 | gap 1, overlap 25353 AAGGAGAAGAAAAGA TCCTTTAGGAGCTC TAA AAACTCCTAA-GGA TGCAATTAGTTGGAA CP0019 28008 - 25390 - | hypothetical protein TERM 32 29766 - 29751 - g 73 -3.9 -4.92756 | opp_overlap 29759, overlap 29752 ACTAGCAAAAACAAA CGCCG AATCTA CGGCA CGAAGTTATTTTCGG CP0020 28270 - 30708 + | hypothetical protein CP0021 30774 - 31001 + | hypothetical protein TERM 33 31393 - 31417 + G 70 -2.9 -4.95547 | opp_overlap 31404, overlap 31413 AGAGGAGATGCGTCG TCCTCATAGAA TCC TTTTGTTAGGA TTTTCTTATTGTCAA CP0022 31058 - 31882 + | hypothetical protein CP0023 32601 - 31879 - | ABC transporter, ATP-binding protein TERM 34 32224 - 32193 - G 75 -10.2 -2.87132 | opp_overlap 32182 32191 32194 32222, overlap 32222 GTTCCCCTCCAGATA GGGTTCCTGCCT TTTTATGG AGGCAGGAACCT AGTTGCAAATCATCA TERM 35 32194 - 32223 + g 100 -15.1 -2.72661 | opp_overlap 32193 32222, overlap 32182 32191 32222 TTCCCCTCCAGATAG GGTTCCTGCCTTT TTAT GGAGGCAGGAACC TAGTTGCAAATCATC CP0024 33096 - 32608 - | hypothetical protein TERM 36 32926 - 32938 + g 95 -3.3 -5.93252 | AGAGCAAATTTGTTT GGAGA CAT TCACC TTTTTTATTTTTAAA CP0025 33908 - 33093 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 37 33432 - 33448 + g 73 -3.7 -5.02606 | ACCGAAGCTACACCC TCTTTCT GTA AGTAAGA TTTTGTTATTTCCTG TERM 38 33502 - 33518 + g 84 -3.6 -5.58209 | CCTTCCATATCCCAA GGGGAG AGAAA CTGCCC TTTTTTTAAATTTAC TERM 39 34077 - 34088 + r 82 -4.4 -5.5112 | ACAAGAAAATCTTGT GTCA GAAT TGAC TTTTTTCTTGGTAGA TERM 40 34236 - 34246 + r 74 -6.8 -4.40605 | CAGGTTCGAGTCCTG CTCG GTC CGAG TTTATCTTTATGCGT TERM 41 34322 - 34349 + r 70 -4.2 -4.69656 | gap 1, opp_overlap 34325 34328, overlap 34320 34325 34327 TAGCAATTTCAATGA GAAGTACTTAAGC TAG GCTTAAG-GCTAC TTTTCTTCCATAATT TERM 42 34344 - 34328 - R 73 -9.5 -2.89447 | opp_overlap 34327 34325 34322 34320, overlap 34325 TTTCAATGAGAAGTA CTTAAGC TAG GCTTAAG GCTACTTTTCTTCCA CP0026 34582 - 34346 - | hypothetical protein CP0027 35669 - 34692 - | ribosomal large subunit pseudouridine synthase D CP0028 36276 - 35956 - | hypothetical protein CP0029 36575 - 36276 - | hypothetical protein CP0030 38116 - 36680 - | DNA topoisomerase IV subunit A TERM 43 36969 - 36993 + g 70 -10 -2.56728 | opp_overlap 36967 36971, overlap 36968 36971 36990 GCAAGCTCATGAAGC CAGGGCTCCA GAGCA TGGAGCACTG CTTGATGTAGGTCAT CP0031 39928 - 38120 - | DNA topoisomerase IV subunit B TERM 44 38493 - 38478 - G 72 -6.2 -4.3255 | GTTTTAAGGAAGAAA GTAATC AAAA GATTAC GAATATGCATACCGT TERM 45 39026 - 39036 + g 75 -3.2 -5.16841 | TTGCGATTCAAAAAT TGGC GAG GCTA TTTTTATTGCTATGC TERM 46 40049 - 40024 - H 74 -9.2 -3.11326 | opp_overlap 40027, overlap 40027 GACAAGCTCAACATA TAAGTTTCGT ACTAAG ACGAAACTTA TGGATCTTAGTCTTG hemA 40478 - 41497 + | glutamyl-tRNA reductase CP0033 41864 - 42256 + | hypothetical protein TERM 47 42764 - 42784 + G 70 -2.5 -5.0538 | overlap 42767 TCCAATTACAAGTGG GGATCAGGA GCT TGCTGATGC TTTTTTAGCATCAGC CP0034 42270 - 44807 + | hypothetical protein CP0035 44854 - 45102 + | hypothetical protein CP0036 45124 - 45378 + | hypothetical protein CP0037 45397 - 45846 + | hypothetical protein CP0038 45880 - 46554 + | hypothetical protein TERM 48 46771 - 46786 + G 71 -9 -3.30243 | GAGTTTTGCCTTTCT CTCTCC TTTA GGAGAG TTATCAGGAGTGAGT TERM 49 47385 - 47426 + G 100 -12.9 -5.07567 | GGGAAGTGGGGTTAG CCGCTGGAGAGCCTCCTGC TAGA GCAGGATACACTCCATCGG TTTTTTCCACTCTAC CP0039 46556 - 47884 + | type III secretion system ATPase TERM 50 48092 - 48068 - g 100 -10.1 -5.13473 | ACTATATGCAAAAAA TCCAACAACTC CGC GATTTGTTGGA CGAAGGTACAACAAG CP0040 47902 - 48408 + | hypothetical protein CP0041 48412 - 49254 + | hypothetical protein TERM 51 49362 - 49337 - g 86 -11.9 -3.08679 | opp_overlap 49337 GTTCCCTAGGGAAGA CTGAGGAGCAG GTTG CTGCTCCTGAG TTTCCTAAGGAACTG TERM 52 49337 - 49362 + G 93 -11.9 -3.72893 | opp_overlap 49337 GTTCCCTAGGGAAGA CTGAGGAGCAG GTTG CTGCTCCTGAG TTTCCTAAGGAACTG TERM 53 49550 - 49530 - g 76 -6.9 -4.5442 | overlap 49549 TTGGGAAGTAGAAAA TCTGTTGTT CCT AACATCAGA AGAAGACCTTCAGGA CP0042 49264 - 50379 + | type III secretion system protein CP0043 50395 - 51903 + | serine/threonine-protein kinase CP0044 51900 - 54659 + | type III secretion protein SctC TERM 54 54732 - 54777 + T 87 -6.4 -5.4833 | GCATTCAGGGGGAAA GCCAAGAAGATGTAGAGT CGGCCGTATA ACTTTATGTTTTCTTGGC TTTTTTGTTCCCTAC CP0045 55986 - 54910 - | ATP:guanido phosphotransferase CP0046 56488 - 55973 - | hypothetical protein TERM 55 56868 - 56884 + r 84 -6.6 -5.09521 | opp_overlap 56871, overlap 56867 AAGTATACTTATATT GAAGCT ATTTC AGCTTC TTTTTGCTTTGTTAA frr 57403 - 56861 - | ribosome recycling factor pyrH 58127 - 57381 - | uridylate kinase TERM 56 57572 - 57562 - G 78 -5.4 -5.02074 | TGATTGCTCAAAAAA TCCT TAT AGGA AACAAAATCATATTT tsf 58983 - 58135 - | elongation factor Ts TERM 57 58340 - 58353 + g 75 -2.4 -5.27938 | TTTCCTTGAATTTGA GAAG CAATCA CTTC TTTTTCTTTAGCAAT rpsB 59816 - 58983 - | 30S ribosomal protein S2 TERM 58 60139 - 60111 - R 79 -5.3 -5.06414 | overlap 60112 60129 GGGGGGGAATAAAAA TTGCTCAGAAATT AAG AAGCTCTGAGCAT AAATCAGAGCCTAAC TERM 59 60138 - 60112 - R 77 -8.8 -3.63367 | overlap 60111 60129 GGGGGGAATAAAAAT TGCTCAGAAATT AAG AAGCTCTGAGCA TAAATCAGAGCCTAA TERM 60 60149 - 60129 - R 73 -6.9 -3.93401 | overlap 60112 60111 60143 CTCAGAAATTAAGAA GCTCTGA GCATAAA TCAGAGC CTAACATGTAGACTC TERM 61 60167 - 60143 - R 85 -9.4 -3.96327 | overlap 60129 AGCTCTGAGCATAAA TCAGAGCCTA ACATG TAGACTCTGA TAACAAGGTGAGGAG CP0051 61369 - 60200 - | major outer membrane protein, porin TERM 62 61315 - 61285 - G 74 -10.4 -2.64218 | overlap 61284 AGCTTGGATCAGAAG GGTTCCCTACAGGC AAG GCTTGTAAGGAGCC GACAGAACCAGCAAA TERM 63 61632 - 61650 + H 93 -7.5 -5.48787 | overlap 61634 GAACTTCTGTTATGA GCTATAG GAAAG CTATAGC TTTTTTGTATATTCT TERM 64 61728 - 61741 + H 93 -3.9 -6.11392 | overlap 61716 ACCTTCTCAAGTCTT TTTCT CTTG AGAAA TTTTTTTGTTTATTT TERM 65 62399 - 62366 - g 77 -10.5 -3.16564 | gap 1, opp_overlap 62366, overlap 62395 CTTTTATCTCAGGAA TTGCAT-TTAGATCGC GAG GCGATCGAAGATGCAA TTCATGCAAAAGCTT TERM 66 62366 - 62399 + G 77 -10.5 -3.14463 | gap 1, opp_overlap 62366 62395 CTTTTATCTCAGGAA TTGCAT-TTAGATCGC GAG GCGATCGAAGATGCAA TTCATGCAAAAGCTT TERM 67 63042 - 63007 - g 80 -9.8 -3.68504 | gap 1, opp_overlap 63006 63007, overlap 63002 GAAGAAACGAGAGAA GCTTCCTCCTTTGTTCC CTT GGATTAAAGGAGG-AGC CATTATTGCGTTAGA TERM 68 63007 - 63043 + G 77 -10.9 -2.83788 | opp_overlap 63002 63007, overlap 63006 GAAGAAACGAGAGAA GCTTCCTCCTTTGTTCC CTT GGATTAAAGGAGGAGCC ATTATTGCGTTAGAT TERM 69 63942 - 63927 - g 77 -6.2 -4.7033 | opp_overlap 63927 CAAGGCAATATAAAA TGTTCT GCCA AGAACA TTTGGATACATTTCT TERM 70 64432 - 64444 + G 70 -2.6 -5.03314 | CTATAGGAGTTCTAA GCCT CACGT GGGC TTTTTTAAAGATGGC CP0052 61985 - 65257 + | penicillin-binding protein, putative CP0053 65328 - 66347 + | type III secretion chaperone, putative TERM 71 66537 - 66568 + F 93 -9.5 -4.29119 | TTCTCTTTTCTTCTG GGCTTGAAAGGGG TAGGTT CGTCTTTCAAGCC TTCTTTGTTATACTG TERM 72 66704 - 66724 + G 74 -6.1 -4.44245 | opp_overlap 66704 66705, overlap 66705 GGTTTTTTTAGAAGA GCGTGAGGA CTA TCCTTACGG TTTTGTGACTCCTAT TERM 73 66705 - 66723 + G 74 -9.6 -3.25824 | opp_overlap 66704 66705, overlap 66704 GTTTTTTTAGAAGAG CGTGAGGA CTA TCCTTACG GTTTTGTGACTCCTA TERM 74 67274 - 67301 + G 73 -8.6 -3.70019 | gap 1, opp_overlap 67273, overlap 67272 67281 TTATGTTCCTAAAGG GGT-GAAATGTCC TAT GGATATTTCTACC TATTTTCGGATTAAT CP0054 66672 - 68126 + | cysteine desulfurase activator complex subunit SufB CP0055 68132 - 68902 + | ABC transporter, ATP-binding protein CP0056 68904 - 70151 + | hypothetical protein TERM 75 70903 - 70891 - g 84 -6.3 -5.07567 | TTATATGGGAAAAAA GATCT ATT AGATC AGTTGCCTCCAGTAG CP0057 70180 - 71400 + | aminotransferase, class V CP0058 72202 - 71444 - | hypothetical protein CP0059 73020 - 72367 - | hypothetical protein TERM 76 72765 - 72754 - G 78 -5.8 -4.7629 | opp_overlap 72754 72753 GCACGAAGCTAAAAA CCCT GCAT AGGG CTTCATGGATTCTCC CP0060 73223 - 73411 + | hypothetical protein CP0061 73477 - 73364 - | hypothetical protein CP0062 73546 - 74406 + | ParB family chromosome partioning protein CP0063 74590 - 74387 - | hypothetical protein TERM 77 74522 - 74499 - G 100 -14 -2.91144 | opp_overlap 74499, overlap 74496 TTAGGTCTTAAAGTA GCCATTCCAT GGAT ATGGAATGGC TTTTGTTTTGTATTT TERM 78 74499 - 74522 + g 100 -14 -5.2894 | opp_overlap 74499 74496 TTAGGTCTTAAAGTA GCCATTCCAT GGAT ATGGAATGGC TTTTGTTTTGTATTT CP0064 75636 - 74662 - | peptide ABC transporter, ATP-binding protein TERM 79 74723 - 74733 + g 75 -5.4 -4.82901 | ATGATCTCTGACTTG CAAG CTT CTTG TTTTTGTGGACAACG TERM 80 75281 - 75293 + g 77 -6.3 -4.60924 | opp_overlap 75281, overlap 75275 AGAGAGTGGCCTAAA CTATC TAG GATAG TTTTTCGCGGGTTTA CP0065 76600 - 75626 - | peptide ABC transporter, ATP-binding protein CP0066 76655 - 77329 + | hypothetical protein TERM 81 78070 - 78059 - g 82 -2.2 -5.60864 | GATACACCAAAAAAA GGCA GTCT TACC TATCGTTTGAAAGAA CP0067 77336 - 78616 + | phosphate permease family protein pgk 78654 - 79862 + | phosphoglycerate kinase TERM 82 80097 - 80069 - f 86 -10.3 -3.55444 | TTCCGATTTTTCAAA TTTTCACCAGAGG ACT CCTCTGGAGATAA CTCCCTGAACTTTAG TERM 83 80112 - 80135 + F 83 -4.7 -5.47159 | ACTCCCTGAACTTTA GATGTTTTT TATTAT AAAAACGTC TTTTTTCTCTTAGAA CP0069 80264 - 80905 + | hypothetical protein TERM 84 81544 - 81528 - g 75 -8.7 -3.6215 | GCAACGCATGGGAAA GGTCGAG CAC CTCAACC TCCTACGGCGGGGTC CP0070 81183 - 82331 + | hypothetical protein TERM 85 82796 - 82810 + G 86 -5.7 -5.35815 | TTAGAAACAGCACTA GCTTC ATGCC GAAGC TTTTTCTTTCATGTA CP0071 82367 - 83536 + | hypothetical protein TERM 86 84351 - 84361 + G 100 -6.8 -5.65927 | opp_overlap 84332 CGTATTGTTACGCGA GCTG ATC CAGC TTTTTTCTTTGAGTG TERM 87 84674 - 84660 - g 70 -5.6 -4.35116 | TATTCGAGACCAAAA TCCCGC CCT GTGGGA TAAAATGATTACCAT CP0072 83665 - 84819 + | hypothetical protein TERM 88 85384 - 85348 - g 100 -13.9 -3.90922 | opp_overlap 85373 ATCTCCGTCAAAGAA CTCCAAGAGAAGTTAGA ATA TCCAAGTTCTCCTGGAG AGCTTCCTGAGGCAT TERM 89 85978 - 85949 - g 74 -4.2 -4.98522 | opp_overlap 85949 AAGTCCACAGAAAAA CGCTTCCCTTAC AAGTAG GTAAGGGCGACG CATTTTTTACTTCTC CP0073 84916 - 86010 + | Nol1/Nop2/Sun family protein TERM 90 86016 - 86006 - T 73 -4 -5.03314 | opp_overlap 86010 86013, overlap 86013 86015 CTCATTTTCAAAAAA TCTA GAA TAGA GGCGCTGTAGAGCGC TERM 91 86032 - 86017 - T 83 -10.4 -3.22076 | opp_overlap 86013 86010, overlap 86015 86013 AAAATCTAGAATAGA GGCGCT GTAG AGCGCC CGAATCTTTCAAAAG CP0074 86297 - 86118 - | hypothetical protein CP0075 87843 - 86533 - | D-alanyl-D-alanine carboxypeptidase TERM 92 86775 - 86742 - G 84 -5.3 -5.252 | CATCGTCATAAAAAA CCCAATGACCAAGAA GATC TCCTTGTTCAATAGG GAAGGCGTCCGCATG CP0076 87954 - 88382 + | hypothetical protein CP0077 88837 - 88385 - | rsbW protein, putative CP0078 89405 - 88806 - | hypothetical protein CP0079 90375 - 89419 - | hypothetical protein TERM 93 89519 - 89529 + g 82 -2.4 -5.68489 | CGGTAATAGATATTC GCAG CCT CGGC TTTTTTCTTCTTCTC CP0080 90527 - 91411 + | hypothetical protein dnaE 95197 - 91475 - | DNA polymerase III subunit alpha TERM 94 91778 - 91794 + g 73 -3.7 -5.03715 | TTCTTTGCCAGAGGT TGACATT GTA AATGACA TTTTTTGCACCTGAT CP0082 96584 - 95217 - | GlpT/PgpT/UhpT family protein TERM 95 95896 - 95913 + g 80 -9.9 -3.60094 | TTGCCCTCGTGATGT GCGTGAT GGGG ATCACGC TTGTACTTCTCTATA TERM 96 96485 - 96506 + g 91 -6.7 -5.4505 | opp_overlap 96485 ACATGCTATAGAAAA TACGAATAC GCCA GTATTTGTA TTTTTTCTTGACCAC CP0083 96828 - 97031 + | hypothetical protein TERM 97 97409 - 97419 + GF 73 -8.2 -3.56811 | overlap 97412 CGTGACTGTAACTCT CCCC AAA GGGG TCTTTGATATATTTC hisS 97395 - 98687 + | histidyl-tRNA synthetase TERM 98 100303 - 100317 + GF 70 -7.1 -3.72576 | GCAGCAGAGAGCATT CGCGA GGTCA TCGCG TTTCCTAAAACACAG aspS 98662 - 100416 + | aspartyl-tRNA synthetase TERM 99 100846 - 100836 - g 74 -4 -4.99665 | GAAAAAAAATCAAAA GAAA ATC TTTC ATTGGCAGAAAAATT CP0086 100485 - 101261 + | peptidyl-prolyl cis-trans isomerase Mip TERM 100 101324 - 101362 + G 100 -14.7 -4.87133 | gap 2 GGTAGAACTTGTGTA GCCCTAGGCGCCGAACTCA TTT TG-GTTCGGC-CCTTGGGC TTTTCTTTAGCCGAT TERM 101 101626 - 101605 - g 70 -2.9 -5.02201 | AAAATATTATAAAAA TTGCCTGCG CATT CCCATGCAA CAAGACATCCGTTCT TERM 102 101723 - 101697 - g 70 -5.2 -4.4715 | opp_overlap 101697 TGGTAAGGCAGAAAA CCGTAGCATT GCAAAAG AATCCTACGG TTTAATATTGCAGCG CP0087 101258 - 101728 + | spoU rRNA methylase family protein CP0088 102052 - 101744 - | thioredoxin TERM 103 102675 - 102665 - g 70 -5.4 -4.57516 | opp_overlap 102665 102663 ACAGGTAAACGAAAA TACG AAG CGTA TCTATATTTGCCCAT CP0089 102417 - 103133 + | hypothetical protein CP0090 103112 - 103537 + | hypothetical protein CP0091 103644 - 103534 - | hypothetical protein TERM 104 103703 - 103684 - H 78 -7.2 -4.28488 | overlap 103680 AGTTAAACACAGAAA TCCTTCTA CAGT CAGAAGGA TATCAAACAAAGATA CP0092 103738 - 104487 + | DNA polymerase III subunit epsilon TERM 105 104557 - 104531 - f 93 -14 -2.57092 | opp_overlap 104536, overlap 104536 AATTTCAGTAACTTA TGAAAGAAAATC ATA GATTTTCTTTCA GTTGACCGATACTAT TERM 106 104552 - 104536 - f 75 -8.1 -3.80114 | opp_overlap 104536, overlap 104531 CAGTAACTTATGAAA GAAAATC ATA GATTTTC TTTCAGTTGACCGAT TERM 107 104536 - 104552 + F 75 -8.1 -3.75332 | opp_overlap 104536 104531 CAGTAACTTATGAAA GAAAATC ATA GATTTTC TTTCAGTTGACCGAT CP0093 104618 - 105085 + | cytosolic acyl-CoA thioester hydrolase family protein TERM 108 105275 - 105300 + G 73 -2.5 -5.11063 | GTATCCTGTTTTTTC TGGATCTTCAC AATA GAGGGGATTCA TTTTTCTTGGATGCT TERM 109 106130 - 106148 + G 71 -8.9 -3.37796 | opp_overlap 106122 AAAGGAATTTCCGTA GGATACG ATAAG CGTATCC TTGTGCCTGGTGGCG TERM 110 106367 - 106349 - g 72 -9.6 -3.18832 | opp_overlap 106349 106352, overlap 106347 106352 CAATCCTACAAGAGA CAAGGAGC CGA ACTCCTTG TTAACTTAACAAATG lnt 105095 - 106720 + | apolipoprotein N-acyltransferase TERM 111 107069 - 107057 - g 78 -9.1 -3.83998 | GTAGTGGAGAGGAAA TCCCC ATA GGGGA TGGAAGCTCAAATGT lpxC 106735 - 107598 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase fabZ 107610 - 108071 + | (3R)-hydroxymyristoyl-ACP dehydratase CP0097 108084 - 108923 + | UDP-N-acetylglucosamine acyltransferase fmt 108913 - 109878 + | methionyl-tRNA formyltransferase TERM 112 110291 - 110277 - g 71 -5 -4.62336 | opp_overlap 110277 AGGGTATGTTAAAAA CAACTC GAG AAGTTG TTGCCTTAGCTAATG TERM 113 110419 - 110409 - g 82 -2.4 -5.59962 | opp_overlap 110409 CAAAAGAAAGAAAAA CGCC TGG GGAG TATAGTAAAATGCTA CP0099 109982 - 110983 + | hypothetical protein TERM 114 111039 - 111010 - f 100 -12.3 -3.9392 | opp_overlap 111000 111010 CTTTATTTTAAAGAA GTCGCTTCTAAAA AATT TTTTGGAAGCGAC TTTCTATTTCTATAA TERM 115 111010 - 111039 + F 100 -14.5 -4.43283 | opp_overlap 111010, overlap 111000 CTTTATTTTAAAGAA GTCGCTTCTAAAA AATT TTTTGGAAGCGAC TTTCTATTTCTATAA TERM 116 111163 - 111173 + F 82 -5.4 -5.26119 | overlap 111153 111164 CTTTATTTTCTTAAG GGAA AAT TTCC TTTTCTTTTTAGAGA rplC 111272 - 111931 + | 50S ribosomal protein L3 TERM 117 112172 - 112156 - g 86 -3 -5.626 | CATTCTACAAAAAAA CCTTTC AAACA AAAAGG TACGGGTAATGCCCG rplD 111964 - 112638 + | 50S ribosomal protein L4 rplW 112655 - 112990 + | 50S ribosomal protein L23 rplB 113012 - 113866 + | 50S ribosomal protein L2 rpsS 113872 - 114138 + | 30S ribosomal protein S19 rplV 114157 - 114492 + | 50S ribosomal protein L22 TERM 118 114659 - 114646 - g 85 -2.4 -5.7946 | TTTTTAAGAAAAAAA CCTT CATGTC AAGG TGCCGCTGGATTTGT TERM 119 114787 - 114775 - g 74 -7.7 -3.9122 | GATCTGCTTAAAGAA GAGCT CAG AGCTC TTACCGGAAAAGAAG rpsC 114508 - 115179 + | 30S ribosomal protein S3 rplP 115208 - 115624 + | 50S ribosomal protein L16 rpmC 115627 - 115845 + | 50S ribosomal protein L29 rpsQ 115838 - 116098 + | 30S ribosomal protein S17 rplN 116121 - 116489 + | 50S ribosomal protein L14 rplX 116503 - 116838 + | 50S ribosomal protein L24 TERM 120 117171 - 117187 + G 73 -5.8 -4.46212 | overlap 117173 TTGTTTCTCCACGGA TTCGCG ACTTC CGCGGA TTTTCTAATAAAGGA rplE 116840 - 117382 + | 50S ribosomal protein L5 TERM 121 117570 - 117588 + G 73 -5.2 -4.66953 | opp_overlap 117568 117574, overlap 117574 AAAGGAAGAAAACCG CAAACGCG CTA TGCGTGTG TTTTTACAATATTCC rpsH 117400 - 117801 + | 30S ribosomal protein S8 rplF 117828 - 118379 + | 50S ribosomal protein L6 rplR 118390 - 118761 + | 50S ribosomal protein L18 rpsE 118779 - 119276 + | 30S ribosomal protein S5 rplO 119269 - 119703 + | 50S ribosomal protein L15 secY 119728 - 121101 + | preprotein translocase subunit SecY rpsM 121157 - 121525 + | 30S ribosomal protein S13 CP0120 121547 - 121948 + | 30S ribosomal protein S11 TERM 122 122957 - 122947 - gf 70 -5.4 -4.42464 | AATTTTGGAAAGAAA TCAC TGT GTGA GATCAAGAATAAATT CP0121 121918 - 123093 + | DNA-directed RNA polymerase subunit alpha rplQ 123100 - 123528 + | 50S ribosomal protein L17 TERM 123 123897 - 123876 - g 95 -5.9 -5.60993 | opp_overlap 123881 TTGTTCACAAAAAAA GAAGATGCT GAGA AGCATATTC AAGCTGGAGCGAAAC CP0123 123570 - 124577 + | glyceraldehyde-3-phosphate dehydrogenase CP0124 124592 - 125425 + | hypothetical protein TERM 124 125420 - 125400 - f 73 -8.3 -3.53012 | overlap 125402 TGTTCTTCCCCGAAA CATCTTCTG CTA CAGAAGAAG AATAGCTATTTTTAA TERM 125 125418 - 125402 - f 79 -9.5 -3.34398 | overlap 125400 TTCTTCCCCGAAACA TCTTCTG CTA CAGAAGA AGAATAGCTATTTTT TERM 126 125437 - 125472 + F 82 -8.5 -4.05875 | opp_overlap 125437 ATAGCTATTTTTAAA GGTATGGTTTAAGTT CACTTT AACTTAAGGCATACC TTTCCCTTTTTTGAA CP0125 125833 - 126795 + | hypothetical protein ruvC 126938 - 127444 + | Holliday junction resolvase ruvA 127446 - 128069 + | Holliday junction DNA helicase motor protein ndk 128141 - 128575 + | nucleoside diphosphate kinase CP0129 129279 - 128572 - | lipoate-protein ligase-related protein CP0130 131101 - 129266 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 127 131240 - 131261 + r 70 -7.3 -3.82084 | opp_overlap 131256, overlap 131241 ATCGATTTGACATCC CCTTCGTCA TAAG TGACGAAGA TTCTTCATATTCAAA TERM 128 131241 - 131260 + r 81 -10.8 -2.88768 | opp_overlap 131256, overlap 131240 TCGATTTGACATCCC CTTCGTCA TAAG TGACGAAG ATTCTTCATATTCAA TERM 129 131271 - 131288 + r 80 -7.1 -4.56597 | CGAAGATTCTTCATA TTCAAAC CGAA GTTTGAA TTTTTCCGGCGGAAC CP0131 132851 - 131445 - | replicative DNA helicase CP0132 133448 - 133954 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase protein, putative TERM 130 134444 - 134462 + G 100 -13.2 -5.5604 | GGGTGGTTAGGCAGT CGGTATCC TCG GGATACCG TTTTTTATTGCTTCA CP0133 134183 - 135805 + | ADP, ATP carrier protein CP0134 135929 - 136930 + | protease IV, putative TERM 131 137462 - 137476 + G 71 -10 -2.70994 | overlap 137461 137464 GTTATGGGATTCCTC CAGGGA ATA TCCCTG ATTATCTAGCGTTAG CP0135 136954 - 139566 + | DNA polymerase I coaE 139560 - 140168 + | dephospho-CoA kinase rho 140165 - 141559 + | transcription termination factor Rho CP0138 141880 - 141596 - | hypothetical protein CP0139 141940 - 142572 + | phosphoribosyl transferase family protein TERM 132 142581 - 142553 - f 80 -9.1 -3.61219 | opp_overlap 142552 142551 ACAAAATTTCCGAAA TTCTAGAAATTGA ATC TTAATTTCTAGAA CCTATTTATTAAAAA TERM 133 142725 - 142736 + G 71 -4.4 -4.84359 | overlap 142714 142711 142711 GGAGGCCTCAAATTT TGAG AGCT CTCA TTTTTATCGAGATAA TERM 134 142890 - 142900 + G 73 -2.6 -5.20333 | overlap 142895 TGCAATTAGTGCAGG TTTT TCA AAAA TTTTTGTTATAGGTC CP0140 142690 - 144015 + | glucose-1-phosphate adenylyltransferase TERM 135 144284 - 144298 + G 73 -8.6 -3.69469 | overlap 144283 TCCAGAGGATATTGT TCTCCT CCC AGGAGA TATTTCTTGGGCTAT CP0141 144141 - 144881 + | hypothetical protein CP0142 144878 - 145438 + | hypothetical protein TERM 136 145738 - 145728 - g 73 -5.4 -4.72272 | GCTCTCGAGTAAAAA GAGA AGT TCTC GTAGGTCGTGATGCC CP0143 145640 - 146392 + | amino acid ABC transporter, periplasmic amino acid-binding protein hemH 147380 - 146397 - | ferrochelatase TERM 137 147376 - 147386 + g 70 -5.4 -4.49556 | AGATAGGCTGGAGTT GTCA CGG TGAC TTTCTTTGCTAAAAA TERM 138 147716 - 147736 + G 87 -4.7 -5.42862 | overlap 147719 147720 TGTCACACGGCTCTA TCTTCTTTC GGG GAAAGGTGA TTTTTTTGAGGATCT TERM 139 147950 - 147963 + G 75 -5.3 -4.76644 | TTGTTTTTGTTTTTG GAAAG ATTA CTTTC TTTTTCGTGAATGTT TERM 140 148443 - 148426 - g 100 -4.2 -6.08563 | AAGAGATAAAAAAAA GAGATT ATAAAA AATCTC AAAAACTTATTAAAT CP0145 147480 - 148484 + | hypothetical protein CP0146 148532 - 148852 + | hypothetical protein TERM 141 149063 - 149073 + G 71 -6.8 -4.18494 | overlap 149057 CTTGTGCTTCCTGTT GCAG GTT CTGC TTTTGGATACGAATC CP0147 149015 - 149212 + | hypothetical protein TERM 142 149261 - 149229 - f 78 -7.9 -4.09685 | gap 1, opp_overlap 149229 149238, overlap 149238 TTTTAGTTTTTAAAA GACAAACAAGAGGG TGAAAG CCCTCT-ATTTGTC TTTTTCCCCCATGAG TERM 143 149229 - 149261 + F 76 -6.4 -4.58395 | gap 1, opp_overlap 149229 149238, overlap 149238 TTTTAGTTTTTAAAA GACAAACAAGAGGGT GAAA GCCCTCTA-TTTGTC TTTTTCCCCCATGAG TERM 144 149253 - 149238 - f 72 -6.1 -4.32763 | opp_overlap 149229 149238, overlap 149229 TTAAAAGACAAACAA GAGGG TGAAAG CCCTC TATTTGTCTTTTTCC CP0148 149438 - 149761 + | hypothetical protein TERM 145 150004 - 150021 + G 72 -6.3 -4.38774 | gap 1 GATGCTCGCTCCTAA GC-TCGTC AGA GACGAAGC TTTTGCTCTACTCTT CP0149 149783 - 151906 + | peptide ABC transporter, periplasmic peptide-binding protein, putative CP0150 151888 - 153369 + | peptide ABC transporter, permease protein, putative TERM 146 154031 - 154014 - g 71 -4.1 -4.84527 | overlap 154022 CTTAGAGATGAAAAA TGAAGGC ATTT GCCTTAA AAGATTACAGCAAAG CP0151 153370 - 155109 + | peptide ABC transporter, permease protein, putative CP0152 155646 - 155125 - | DNA methyltransferase CP0153 156627 - 155656 - | hypothetical protein TERM 147 156154 - 156168 + g 71 -8.6 -3.50393 | opp_overlap 156154 GTATTTCCCATTAAA GGAAGT ATA ACTTCC TTCTATGACATGCCC TERM 148 156168 - 156154 - G 73 -8.6 -3.73224 | opp_overlap 156154 GTATTTCCCATTAAA GGAAGT ATA ACTTCC TTCTATGACATGCCC pheT 159002 - 156624 - | phenylalanyl-tRNA synthetase subunit beta TERM 149 157415 - 157430 + g 90 -4 -5.64321 | TATGTTTGGAGCCCT GAAGAG AGAT TTCTTC TTTTTCTTTTCTTGT TERM 150 158574 - 158590 + g 77 -10.9 -2.84732 | overlap 158576 AGGGGTGGCTTCTGG GAGCTCT AAA AGAGCTC TCTCCTGAATTTGGA CP0156 160441 - 160121 - | hypothetical protein CP0155 159109 - 160197 + | hypothetical protein CP0157 161212 - 160562 - | hypothetical protein TERM 151 160736 - 160752 + g 71 -3 -5.01811 | overlap 160748 CTTTTTTGCGATGGC TTTCCG AGACA TGGAAA TTTTTCCTTTAGTAG CP0158 161473 - 162072 + | hypothetical protein TERM 152 162134 - 162113 - T 72 -5.9 -4.28361 | opp_overlap 162117 TGAATTCTAGGAAAA CACACCTTT TTTC AAAGGTTTG GTGCAGCGGTACCTT recO 162945 - 162187 - | DNA repair protein RecO CP0160 163501 - 162956 - | hypothetical protein TERM 153 163392 - 163415 + gr 93 -10.4 -3.9712 | gap 1, opp_overlap 163410 TGGCGGACTTTTTCT TCGGGAG-TAG AAA CTAACTCCCGA TTTCTAATGGGATCG CP0161 164144 - 163458 - | hypothetical protein TERM 154 163612 - 163632 + gr 71 -3.4 -5.07486 | gap 1, opp_overlap 163616, overlap 163616 ATAGCCTCGTCTTGA GAT-AGCAT ACGA ATGCTCATC TTTTTCTTGGAGATC TERM 155 164397 - 164386 - R 79 -3.6 -5.51353 | GAAAAACAAGAAAAA CCCC TAGA GGAG ATCAAGCTAAAGCGA CP0162 165583 - 164399 - | sigma-54 dependent response regulator TERM 156 165037 - 165020 - G 81 -5.5 -5.24129 | opp_overlap 165020 GTGGTGGATAAAAAA GGAGAGG ACTT CCTTTCC GCATCCCGATTCTCC CP0163 165768 - 167723 + | hypothetical protein TERM 157 167739 - 167729 - T 77 -5.4 -4.84492 | opp_overlap 167729 TCAAGGATAAGAAAA CATC GTA GATG ATCTTTGAGAACCCT CP0164 168908 - 167784 - | sensor histidine kinase TERM 158 168531 - 168545 + gT 81 -4.2 -5.33026 | CTCGTTTTTACGGAT GAAGAG TTC CACTTC TTTTTCTTTAGATTC CP0165 169185 - 168865 - | hypothetical protein CP0166 170082 - 169405 - | hypothetical protein truA 171592 - 170789 - | tRNA pseudouridine synthase A CP0167 170109 - 170843 + | HAD superfamily hydrolase TERM 159 171217 - 171207 - GT 74 -6.8 -4.27117 | GGGGTATAACAGAAA TGGC GCT GCCA GGGAAGAGGTTTGGC ispD 172224 - 171589 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 160 171709 - 171720 + g 78 -2.2 -5.45802 | TTCGATGTCGTCTAC CAGT GTGA GCTG TTTTTCTTTTGCAAG CP0170 173179 - 172217 - | hypothetical protein TERM 161 172750 - 172764 + g 71 -2.1 -5.14563 | CAGCAATGATGGCGC GTTGT ATAGG ACGAC TTTTTTCCTCAGGGA TERM 162 173050 - 173065 + g 82 -4.7 -5.40474 | opp_overlap 173052 GAGCGATGCGAAGAC CATGC AAATGC GCATG TTTTTTTGGAAGCCT TERM 163 173343 - 173362 + rH 78 -10.6 -2.74563 | AAGATCACTTTATAT CCCCGCCC TAAA GGGCAGGG TACTTAACATATCAG CP0171 173690 - 173427 - | hypothetical protein TERM 164 173660 - 173676 + gH 87 -4.5 -5.49729 | TATTCACGGGATGCA TAAAAGC AGA GTTTTTA TTTTTTTGACTCATT TERM 165 173708 - 173742 + G 80 -2.8 -5.4251 | opp_overlap 173708, overlap 173710 GTGACTCCTAGTAAA GGTGGTAAGAAGAG ACCTGAG CTCTTCATCCCAAC TTTTTTATCTCTCAG CP0172 173690 - 173845 + | hypothetical protein TERM 166 173877 - 173853 - f 72 -5.8 -4.31697 | overlap 173850 AGATATAACAAAGAA CTTTCTCTCC AAAAA GAAGAAAAAG TCTTGGTTTTTGTTT TERM 167 174279 - 174293 + F 78 -7.2 -4.36914 | opp_overlap 174289 ATTTGTGAAGACTTA GAGAAA GAA TTTCTC TTTTGTGAGAAGAAA CP0174 175091 - 175606 + | acetyltransferase CP0175 175640 - 176194 + | hypothetical protein CP0176 176181 - 176897 + | hypothetical protein CP0177 179233 - 176966 - | hypothetical protein TERM 168 178499 - 178526 + g 71 -2 -5.10516 | overlap 178501 178504 GAATTTAGCGATGCA CATTTCTAAGTC CGCA GGCTTAGTAATA TTTTCTTTGGTTTTT TERM 169 180501 - 180513 + G 91 -7.7 -4.75372 | CTTCAGCACATGGGA GCTGA GTG TCAGC TTTTTCATCAGTGCT CP0178 179463 - 180839 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase argS 182478 - 180793 - | arginyl-tRNA synthetase TERM 170 181837 - 181860 + g 71 -2.4 -5.09173 | gap 1, overlap 181838 181858 ATCCTTAGCCTGTAA TGCTACC-ACA TTC TGTTGGGAGCG TTTTTTAAACTCTTC TERM 171 182303 - 182313 + g 75 -2.4 -5.40072 | opp_overlap 182303 ATGGCCTCAGCAATA GCCC TCG GAGC TTTTTTTAAAACACG CP0180 183121 - 182483 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative cmk 183768 - 183118 - | cytidylate kinase CP0182 184691 - 183765 - | phosphatidate cytidylyltransferase, putative CP0183 185477 - 184692 - | hypothetical protein TERM 172 185193 - 185208 + g 77 -6.2 -4.66537 | TTCTTGAATTTCCTC TTTTGG TCTC CCAAAA TTTTCTGTTGAAAAC CP0184 185681 - 185532 - | hypothetical protein TERM 173 185846 - 185857 + H 82 -3 -5.59502 | opp_overlap 185839 185846, overlap 185839 ATGAAAATTTTGAAA CAAA CTCT TTTG TTTTTTAATTTTTTG TERM 174 186354 - 186322 - g 79 -3.3 -5.40474 | overlap 186324 186327 AGTCTTGGAAAAAAA TACGACCCGGATGCT ACT ATCATCCAGGCTGTC CCCAAGTAGAGATCT TERM 175 186352 - 186324 - g 70 -5.9 -4.34482 | overlap 186322 186327 TCTTGGAAAAAAATA CGACCCGGATGCT ACT ATCATCCAGGCTG TCCCCAAGTAGAGAT CP0185 185955 - 187055 + | hypothetical protein TERM 176 187165 - 187175 + F 93 -5.4 -6.09133 | overlap 187151 GTGGAGGGCTCCTCT TCGT TTG ACGA TTTTTTTTTCAACTG TERM 177 187848 - 187862 + G 80 -2.8 -5.4505 | ATGCCAAGAACCTTT CTTCAG GAT TTGAGG TTTTTTCTTCGCGAC TERM 178 188077 - 188092 + G 76 -2.6 -5.28481 | GCTTCGATTAGATTG TAGTGA GTCC TCATTA TTTTTTAGTTCCATA TERM 179 188245 - 188233 - g 81 -4.1 -5.26119 | opp_overlap 188216 TGTTGAAAAACAAAA GCTCT CTA AGAAC TTAACTGTTCAAGTA TERM 180 189893 - 189867 - g 75 -10.2 -2.87319 | opp_overlap 189867 189866 189864, overlap 189866 GTGAAGTGAGCAAAC TCGCCTCAGATT TAA AATCTGGAGCGA TGTCTTTTGTTCCCG TERM 181 189867 - 189893 + G 80 -10.2 -3.55261 | opp_overlap 189866 189867, overlap 189866 189864 GTGAAGTGAGCAAAC TCGCCTCAGATT TAA AATCTGGAGCGA TGTCTTTTGTTCCCG TERM 182 189920 - 189936 + G 70 -9.5 -2.73875 | opp_overlap 189923, overlap 189923 CCCGAGGTTCTCAGT GAAGAGA CGA TCTCTTC TGATCTTGGGAAAAA CP0186 187235 - 191443 + | bifunctional preprotein translocase subunit SecD/SecF TERM 183 191512 - 191483 - f 77 -4.9 -5.1244 | opp_overlap 191483 191491 191496 191503, overlap 191484 191485 GTAGCAATATAAAAA TCTCCTTTGGGAC TTTA GTCCCAAAGGCCC CTGTGGTATTAAATT TERM 184 191511 - 191484 - f 73 -8.4 -3.6638 | opp_overlap 191483 191491 191496 191503, overlap 191483 191485 TAGCAATATAAAAAT CTCCTTTGGGAC TTTA GTCCCAAAGGCC CCTGTGGTATTAAAT TERM 185 191510 - 191485 - f 84 -11.9 -2.78743 | opp_overlap 191483 191491 191496 191503, overlap 191484 191483 AGCAATATAAAAATC TCCTTTGGGAC TTTA GTCCCAAAGGC CCCTGTGGTATTAAA TERM 186 192399 - 192385 - g 81 -4.2 -5.31275 | overlap 192386 192390 GTGGAGTAGAAAAAA GCGAAG TCA CTTCGA CAGATATTGTCTTGA TERM 187 192398 - 192386 - g 72 -7.7 -3.78042 | overlap 192385 192390 TGGAGTAGAAAAAAG CGAAG TCA CTTCG ACAGATATTGTCTTG CP0187 191529 - 193295 + | single-stranded-DNA-specific exonuclease RecJ CP0188 193549 - 194670 + | hypothetical protein TERM 188 194701 - 194670 - f 76 -9.7 -2.83449 | opp_overlap 194674, overlap 194667 194674 ACATTTCGATAATTA GAAACTCATCTTT TAAACC AAAAATGAGTTTC CTAAGGTTCATCGCA TERM 189 195550 - 195530 - g 86 -11.9 -3.09635 | AGGTCTACTATGCAA CTCGTACGG GAA CCATACGAG GAGAGCGTAAGGGAG CP0189 195181 - 195717 + | hypothetical protein TERM 190 195837 - 195872 + F 100 -15.1 -5.29885 | opp_overlap 195841 TCGTGATTTTTTTGA GAAACTCCTTAATTT TTTATT AAATTAAGGAGTTTC TTTTATTTTTGGATT TERM 191 195868 - 195841 - f 83 -10.1 -3.86015 | opp_overlap 195837 GATTTTTTTGAGAAA CTCCTTAATTT TTTATT AAATTAAGGAG TTTCTTTTATTTTTG TERM 192 196122 - 196091 - g 75 -7.4 -4.36595 | gap 1, overlap 196085 196094 GATTTAAAGGGAAAA TGATCC-TCCGTATC GAA GATACGGATAGAACA CGTAGTCGCCAAGAT TERM 193 197425 - 197400 - g 73 -5.6 -4.42386 | gap 1 TGTGTATGCAGAAAA GCTT-TTAGGA GGCGT TCCTAAGAAGC TCGCTGCAACTGTGG gltX 195973 - 197490 + | glutamyl-tRNA synthetase CP0191 197843 - 197655 - | hypothetical protein CP0192 198101 - 198208 + | hypothetical protein omcA 198285 - 198557 + | OmcA TERM 194 198593 - 198625 + TF 75 -8.5 -3.36289 | opp_overlap 198590 TACTTAAATTGATCA GGTAGTTAGGAGATG AAT TAATTCCTGACTACC TTAATTCAGATAATA CP0194 198737 - 198621 - | hypothetical protein omcB 198724 - 200394 + | 60 kDa outer membrane protein TERM 195 200405 - 200448 + FH 100 -17.7 -3.53811 | opp_overlap 200406 200407 200409 200416, overlap 200406 200416 ATTAAATTCTAAGGA ATTATCCTAAAGCAGAGCG ATATTC CGCTCTGCTTTAGGATAGC TTTCAAAGAAGTACC TERM 196 200406 - 200447 + FH 100 -21.2 -2.72144 | opp_overlap 200406 200407 200409 200416, overlap 200405 200416 TTAAATTCTAAGGAA TTATCCTAAAGCAGAGCG ATATTC CGCTCTGCTTTAGGATAG CTTTCAAAGAAGTAC TERM 197 200447 - 200406 - fH 100 -19.7 -3.3907 | opp_overlap 200406 200405 200416, overlap 200407 200409 200416 TTAAATTCTAAGGAA TTATCCTAAAGCAGAGCGA TATT CCGCTCTGCTTTAGGATAG CTTTCAAAGAAGTAC TERM 198 200446 - 200407 - fH 100 -23.2 -2.6296 | opp_overlap 200406 200405 200416, overlap 200406 200409 200416 TAAATTCTAAGGAAT TATCCTAAAGCAGAGCGA TATT CCGCTCTGCTTTAGGATA GCTTTCAAAGAAGTA TERM 199 200444 - 200409 - fH 100 -21.4 -2.84841 | opp_overlap 200406 200405 200416, overlap 200407 200406 200416 AATTCTAAGGAATTA TCCTAAAGCAGAGCGA TATT CCGCTCTGCTTTAGGA TAGCTTTCAAAGAAG TERM 200 200416 - 200437 + FH 90 -11.6 -3.62864 | opp_overlap 200409 200407 200406 200416, overlap 200406 200405 AGGAATTATCCTAAA GCAGAGCG ATATTC CGCTCTGC TTTAGGATAGCTTTC TERM 201 200437 - 200416 - fH 95 -12.3 -3.64162 | opp_overlap 200416 200406 200405, overlap 200409 200407 200406 AGGAATTATCCTAAA GCAGAGCGA TATT CCGCTCTGC TTTAGGATAGCTTTC TERM 202 200493 - 200459 - fH 87 -10.1 -3.91984 | opp_overlap 200462, overlap 200462 ATAGCTTTCAAAGAA GTACCGCTTTAGTAC CTTAC GTACTAAAGCGGTTT TTTTGTTTTATAAGC TERM 203 200462 - 200490 + FH 100 -16.2 -6.14618 | opp_overlap 200462 200459 GCTTTCAAAGAAGTA CCGCTTTAGTAC CTTAC GTACTAAAGCGG TTTTTTTGTTTTATA TERM 204 200490 - 200462 - fH 100 -16.2 -3.02371 | opp_overlap 200462, overlap 200459 GCTTTCAAAGAAGTA CCGCTTTAGTAC CTTAC GTACTAAAGCGG TTTTTTTGTTTTATA TERM 205 200727 - 200710 - g 86 -11.3 -3.40163 | opp_overlap 200708 200706, overlap 200704 TAGGAGGAACAGGAA CAGGAGC AGCT GCTCCTG AGTCTGTGCTAAACA srp 200673 - 201263 + | hypothetical protein CP0197 203287 - 201341 - | tail-specific protease precursor, putative TERM 206 202726 - 202741 + g 80 -9 -3.94634 | opp_overlap 202726 202728 TTTGACGTAGACACA GAGCAG CAAG CTGCTC TTCTTTACCCTCATA CP0198 203731 - 203441 - | hypothetical protein CP0199 203838 - 204776 + | hypothetical protein TERM 207 205093 - 205058 - g 70 -5.4 -4.57482 | CTAGCTAGAAAGAAA TCCCCAGCTTTGCAGA AGTG CCCACAAAAGCGGGGA GTTTGCCTTCAAGTA TERM 208 205149 - 205119 - g 91 -5.5 -5.67529 | gap 1, opp_overlap 205129 205140, overlap 205120 205129 AAGTAAAAACAAAAA CTCCTAAGAAGCCG AACT CGGCTT-TAAGGAA AGTTGCTTGGGTGCG rpsL 204998 - 205369 + | 30S ribosomal protein S12 CP0201 205417 - 205890 + | 30S ribosomal protein S7 TERM 209 206538 - 206521 - g 73 -2.7 -5.11112 | AAATGGGAAGAAAAA GAGATTT CTGA AGATCTC AAAGAGCGTTGTGCA TERM 210 207030 - 207011 - g 75 -8.6 -3.85698 | CTCGCCTTTTAGAAA TGCACGCT AATG AGCGTACA GATAGAGATGAGTTT CP0202 205924 - 208008 + | elongation factor G rpsJ 208016 - 208333 + | 30S ribosomal protein S10 CP0204 208354 - 209397 + | oxidoreductase ispF 209924 - 209394 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase rplU 210356 - 210676 + | 50S ribosomal protein L21 rpmA 210701 - 210955 + | 50S ribosomal protein L27 TERM 211 211022 - 210991 - Tf 84 -5.8 -5.34055 | opp_overlap 210991 AGAAACATTAAAAAA GCTCGGTTTTTTGC TCAG GCATCAAATCGAGC TTTTTTTGTTTGAAG TERM 212 210991 - 211022 + TF 100 -8 -5.95539 | opp_overlap 210991 AGAAACATTAAAAAA GCTCGGTTTTTTGC TCAG GCATCAAATCGAGC TTTTTTTGTTTGAAG TERM 213 211709 - 211683 - gT 86 -8 -4.72272 | overlap 211684 CGTTTGTATCAAAAA CCCTGGATTATC GCT GACATTCCAGGA ATCATTGAAGGAGCT TERM 214 211708 - 211684 - gT 79 -9.3 -3.43042 | overlap 211683 GTTTGTATCAAAAAC CCTGGATTATC GCT GACATTCCAGG AATCATTGAAGGAGC TERM 215 211826 - 211810 - gT 85 -8.7 -4.08767 | overlap 211821 TCGATGTCTCCAAAA GAGAGAG AAA CTCTCCC GAAGAAGACTTAGAA TERM 216 211955 - 211915 - gT 71 -4 -4.87803 | overlap 211940 211948 TAGCTTTAAATAAAA TTGATGATCTTCTTCCTG ACGAA CAGGAAGAATGCCTCCAA AGCTTCCAAAAGCGC CP0209 212860 - 211979 - | ABC transporter, permease protein obgE 211056 - 212063 + | GTPase ObgE TERM 217 212153 - 212139 - GT 70 -3.6 -4.89393 | CAAATTCCAGAAAAA GAACAT AAG ATATTC AAGAGGACCGAGATG CP0210 213582 - 212845 - | ABC transporter, ATP-binding protein TERM 218 212965 - 212955 - G 81 -4 -5.36441 | opp_overlap 212955 TGTTCATATAAAAAA CTTT ATT AAAG TAATTCGTCGTATGG TERM 219 213345 - 213329 - G 72 -6.5 -4.29304 | overlap 213330 GGATCATAAGAGAAA TGTTGGG GAA CCCAACC GATCATGGAATGGGT TERM 220 213344 - 213330 - G 74 -10 -3.16859 | overlap 213329 GATCATAAGAGAAAT GTTGGG GAA CCCAAC CGATCATGGAATGGG CP0211 214415 - 213579 - | ABC transporter, periplasmic substrate-binding protein, putative CP0212 219918 - 214720 - | polymorphic membrane protein B/C family protein TERM 221 218298 - 218323 + g 79 -6.9 -4.72272 | opp_overlap 218300 218303 TAGCCGCTTTGGTAA TAGGAGCGGAA TAAT TTCCGGTCTTA TTTTTACTAAAGCGG TERM 222 219878 - 219867 - G 75 -5.8 -4.7373 | opp_overlap 219872 GTACGGCAGCAAAAA CAGC TGTA GCTG GTAGCCACTTCATAG TERM 223 219961 - 220013 + r 76 -4.2 -5.06016 | opp_overlap 219974, overlap 219974 ATGGATAAATTAGGC AAGGGATAAAAAAGCGCGTGTTTG AATGA TAACCACGCGCTTTTTAAGTCTTC TTTTATTTCTATAGT TERM 224 219974 - 220000 + r 93 -8.7 -4.77216 | opp_overlap 219974, overlap 219961 GCAAGGGATAAAAAA GCGCGTGTTTG AATGA TAACCACGCGC TTTTTAAGTCTTCTT TERM 225 220000 - 219974 - R 90 -8 -5.31456 | opp_overlap 219974 219961 GCAAGGGATAAAAAA GCGCGTGTTT GAATGAT AACCACGCGC TTTTTAAGTCTTCTT CP0213 222880 - 220037 - | polymorphic membrane protein A family protein TERM 226 221335 - 221346 + g 71 -3 -4.98672 | opp_overlap 221335, overlap 221330 GGTTGAATCCTAAAT TTGT GATG ACAA TTTTATCTTTTTCAG CP0214 223373 - 223071 - | hypothetical protein CP0215 223752 - 223393 - | hypothetical protein CP0216 225240 - 223891 - | sodium/alanine symporter family protein TERM 227 225276 - 225292 + r 78 -2.3 -5.59564 | overlap 225267 TTAGCTTCTCTTGAA GAGAT CTATATT ATCTC TTTTTTTCAGTTTGT lspA 225792 - 225286 - | lipoprotein signal peptidase TERM 228 225546 - 225535 - G 70 -7.2 -3.8599 | overlap 225533 TTTAAAAAAAAGATA GGCC AGGA GGCC AAGAATCACAAATAT CP0218 226196 - 225798 - | hypothetical protein CP0219 226655 - 226197 - | transcriptional regulator NrdR CP0220 226911 - 227513 + | riboflavin synthase subunit alpha CP0221 227516 - 228343 + | hypothetical protein TERM 229 228835 - 228875 + G 93 -13.5 -2.76696 | gap 1, overlap 228836 TTAGGAGCTGTCTTT TCTCTTCCCATCCTCTCT ATTTCA AGAGAGGAAGGGAAG-GA GTTGTTCAAGCAGGA TERM 230 228836 - 228876 + G 100 -13.5 -3.61398 | gap 1, overlap 228835 TAGGAGCTGTCTTTT CTC-TTCCCATCCTCTCT ATTTCA AGAGAGGAAGGGAAGGAG TTGTTCAAGCAGGAA CP0222 228331 - 229128 + | spoU rRNA methylase family protein TERM 231 229173 - 229185 + F 70 -2 -5.27477 | AATTATATTAGTTTT TTGT TTAAC ACAA TTTTTTAATTAAGCT TERM 232 229760 - 229787 + G 77 -8.4 -3.98762 | opp_overlap 229752, overlap 229761 GCATAAGGACCGGAG GATCTCTGCAGC ACGC GCTGCAGAGAAA TTTGGTATTCTCCTT TERM 233 229761 - 229786 + G 86 -11.9 -2.98173 | opp_overlap 229752, overlap 229760 CATAAGGACCGGAGG ATCTCTGCAGC ACGC GCTGCAGAGAA ATTTGGTATTCTCCT lpxK 229326 - 230423 + | tetraacyldisaccharide 4'-kinase TERM 234 230918 - 230931 + G 70 -3.7 -4.76123 | TCTGGAGAACGTGGC CGCCC TGTC GAGCG TTTTATTGATGGTTT CP0224 230423 - 231667 + | sodium:dicarboxylate symporter family protein CP0225 231681 - 232862 + | branched-chain alpha-keto acid dehydrogenase subunit E2 CP0226 232889 - 233878 + | carbohydrate isomerase KpsF/GutQ family protein CP0227 234013 - 234117 + | hypothetical protein CP0228 235063 - 234299 - | hypothetical protein TERM 235 234609 - 234627 + g 74 -4.7 -4.89063 | CCTTCTTCATTAATC TTTTTGA TGCTT TCAAAAA TTTCTTTTTCAATGA CP0229 236482 - 235403 - | hypothetical protein CP0230 236862 - 236530 - | hypothetical protein hemD 237598 - 236927 - | uroporphyrinogen-III synthase TERM 236 238462 - 238479 + G 70 -5.5 -4.48987 | overlap 238465 CTTCCCCTATGATGT CAATCCG GATA CGGAGTG TTTTGATTATGCAGA glyA 237854 - 239347 + | serine hydroxymethyltransferase CP0233 239367 - 239942 + | ATP-dependent Clp protease proteolytic subunit dapF 239911 - 240684 + | diaminopimelate epimerase CP0235 240782 - 241756 + | hypothetical protein TERM 237 242448 - 242489 + G 74 -8 -3.922 | ATTTATGGAGCATTT CAGCCCTGAGCCACCGAA CGAGCC TTTGGTGGATTGGGCCTG TTTGATTCGGGATTT CP0236 241954 - 242793 + | hypothetical protein CP0237 242771 - 244333 + | hypothetical protein TERM 238 244382 - 244398 + T 84 -6.5 -5.06472 | opp_overlap 244381, overlap 244384 CTCCTTGCGACCAAG CTTGGAG ATC CTCCATG TTTTATTGTTTCTCT TERM 239 244384 - 244396 + T 78 -7.7 -4.12859 | opp_overlap 244381, overlap 244382 CCTTGCGACCAAGCT TGGAG ATC CTCCA TGTTTTATTGTTTCT ubiE 245114 - 244401 - | ubiquinone/menaquinone biosynthesis methyltransferase CP0239 245856 - 245062 - | hypothetical protein CP0240 246938 - 245829 - | hypothetical protein TERM 240 245914 - 245943 + gr 71 -6.5 -4.10925 | opp_overlap 245914 GCGTCCATTTTAATA GGTTCTTTAGATG AGGC CATCTGGAAAACC TTTTCCCCCATATGT CP0241 247143 - 246910 - | hypothetical protein CP0242 249032 - 247170 - | hypothetical protein TERM 241 247684 - 247674 - G 74 -6.8 -4.2461 | opp_overlap 247673 247682 ACCCCCAGCAACAAA TCCG AAG CGGA GATTCTTCTTTAATC CP0243 249444 - 249094 - | anti-anti-sigma factor CP0244 250772 - 249609 - | hemolysin, putative TERM 242 250625 - 250646 + g 86 -8.7 -4.32857 | TTGTAGGAGCACTGG GGAAGGGGG GATA CTCTCTTCC TTTATCTTTGAAGAA TERM 243 250770 - 250794 + g 91 -3.5 -5.80364 | TAAAAGAATATGGAG CATGTTAAGCT GTT AGCAAAGCATG TTTTTTTCTTAACAT CP0245 251250 - 250774 - | hypothetical protein TERM 244 251202 - 251228 + g 79 -6.7 -4.59591 | opp_overlap 251202 CCAAATGAATAGGAA TACATGTTTGC TCATT GGAAACATGTA TTTTGATCTTTTCTT TERM 245 251298 - 251317 + r 76 -4.2 -5.13473 | TATTTTAAAATAGGG GTCTTAGG TAAA CCTGTGAC TTTTTTCGCTGTACT CP0246 251443 - 251282 - | hypothetical protein CP0247 252524 - 251742 - | hypothetical protein TERM 246 252332 - 252297 - GR 76 -7.6 -3.92832 | opp_overlap 252297 252296 AAATTTCTCAAAGAA TTCCGAAGCCAAGCCT ACGA AGGGTTGGGTTAGGAA GTTCATGATCATAGT TERM 247 252370 - 252353 - GR 70 -7.1 -3.78778 | TGATCATAGTAACAA TAGCAAT AGTA ATTGCTA GAGGAAGGAGAATAA CP0248 253066 - 252476 - | DNA-3-methyladenine glycosylase TERM 248 252626 - 252638 + gr 78 -7.7 -4.17048 | GAGAGCTGGGGTATT TAGGC GTT GCCTA TTGTTTTCCAAAGAG CP0249 255098 - 253068 - | VacB/Rnb family exoribonuclease TERM 249 254150 - 254174 + g 70 -5.7 -4.3898 | opp_overlap 254150, overlap 254153 TGACGCTACGGAAAA TCTGGTAATCT GAA AGATGACCTGA TTTTGTAAACGTCAT TERM 250 255343 - 255314 - g 76 -9.3 -3.44146 | overlap 255310 255315 TCTGTTTATAAGGAA GTTTCCCATCCTC TTAT GAGGATGGGAATA GAGAAACTTAAATTG TERM 251 255342 - 255315 - g 91 -12.8 -2.66274 | overlap 255310 255314 CTGTTTATAAGGAAG TTTCCCATCCTC TTAT GAGGATGGGAAT AGAGAAACTTAAATT CP0250 255287 - 255391 + | hypothetical protein dnaK 257351 - 255369 - | molecular chaperone DnaK TERM 252 255631 - 255645 + g 70 -5.6 -4.29176 | overlap 255632 GGAGCGTCATCTTTG AGTGCG TTG CGCACG TTTTCGATTCGCTCT TERM 253 255852 - 255862 + g 75 -5.4 -4.84673 | AAGTCCTGAGCTTGC TTCG ATA CGAA TTTTCTGTTCTTTAC TERM 254 255928 - 255943 + g 70 -7.6 -3.57462 | CCGTTTGCATCGATA TCGAAG GAGA CTTCGA TTTGAGGATGGCCTC CP0252 257935 - 257381 - | heat shock protein GrpE, putative TERM 255 257503 - 257517 + g 71 -8.6 -3.55801 | TCCCCTCAGGAACTT CAGAAG TCT CTTCTG TTTGCACCGCTTCGT hrcA 259155 - 257932 - | heat-inducible transcription repressor TERM 256 258482 - 258515 + g 100 -13.3 -2.96274 | overlap 258477 258477 258489 AGGTGTTCTTCTTTT TTCGAAAGTTCCTCA TTTG TGGGGAGCTTTCGGA TGTAGTTCTGCAGGA TERM 257 259002 - 259013 + g 75 -5.8 -4.66163 | AAGTTTTAGACCCTA CAGG CTGC CCTG TTTTTAGGTACAACT CP0254 260926 - 259220 - | prolyl-tRNA synthetase TERM 258 259606 - 259620 + g 70 -7.8 -3.61328 | overlap 259607 259617 TGCCGTAGGTCCCCA TCCAGC ACT GCTGGG TTTGCCCGTGTTCAT CP0255 261226 - 262383 + | hypothetical protein TERM 259 263239 - 263253 + G 91 -8.6 -4.74539 | overlap 263224 GTGTGGTTGCGAATC GTAAGG ACA CCTTAC TTTTATTCCGTTCTT CP0256 262551 - 263504 + | hypothetical protein CP0257 263497 - 263769 + | hypothetical protein CP0258 264793 - 263771 - | hypothetical protein CP0259 265983 - 264790 - | L,L-diaminopimelate aminotransferase CP0260 266222 - 266443 + | hypothetical protein CP0261 266582 - 266734 + | hypothetical protein CP0262 266934 - 266779 - | hypothetical protein TERM 260 267010 - 267030 + H 77 -9.1 -3.16872 | opp_overlap 267010, overlap 267009 267022 TTTCTTCTCTATACA CTGTCTTTA CGA TGAAGACAG CTTTTCACTCTTGCT TERM 261 267492 - 267506 + G 75 -5.8 -4.64076 | GGGGTATGGTTACCT CAAAAT ACC ATTTTG TTTTCTCCTTTGATT CP0263 267021 - 268253 + | hypothetical protein CP0264 270307 - 268250 - | hypothetical protein TERM 262 269066 - 269048 - G 78 -6 -4.85599 | TCGATTCGAGAAAAA CTCTCC AGAAGTG GGAGAG GGAATCTGAAAATAG TERM 263 269147 - 269120 - G 74 -9.2 -3.32993 | gap 1, overlap 269122 GTAGTTAGAGAGGAA CATGCCCTTCAGC GAT GCTGAAGGGAA-G TAGCGGGAAAATAAA TERM 264 269146 - 269122 - G 95 -12.9 -3.23045 | overlap 269120 AGTTAGAGAGGAACA TGCCCTTCAGC GAT GCTGAAGGGAA GTAGCGGGAAAATAA TERM 265 271043 - 271054 + GH 75 -2.2 -5.25772 | GGAAGAAGAAACTAA TTCG GATG CGGA TTTTTCTTGTGCTTT CP0265 270591 - 271493 + | hypothetical protein CP0266 271445 - 271822 + | HIT family protein TERM 266 271856 - 271868 + G 73 -9.1 -3.48153 | GATCCTTGTTCGGCT CGGAG TCC CTCCG TTATCAATTGTTGAT TERM 267 273154 - 273168 + G 84 -2.8 -5.626 | opp_overlap 273154 CTTTCAGGACAGCAA GCTC AGGGATG GAGC TTTTTTTCTGGAATG CP0267 271846 - 273477 + | hypothetical protein TERM 268 273848 - 273864 + F 78 -2.3 -5.65496 | overlap 273851 GTGGAGTTCTTTATT TTATGAA TTT TTCATTA TTTTTATTTTTCCTG TERM 269 273851 - 273861 + G 71 -4 -4.855 | overlap 273848 GAGTTCTTTATTTTA TGAA TTT TTCA TTATTTTTATTTTTC CP0268 273850 - 275184 + | sodium:solute symporter family protein TERM 270 275302 - 275341 + T 83 -5 -5.55001 | opp_overlap 275302, overlap 275307 275308 AGTTGTGTTTAGAAT CTGATACCTCTCCTTCTT TTCC AAGAAGAAGAGGGGTTCG TTTTATTTTTTATTA TERM 271 275308 - 275337 + T 73 -7.3 -3.989 | gap 1, opp_overlap 275302, overlap 275307 275302 GTTTAGAATCTGATA CCTCTCCTTCTTTT CCA AGAAGAAG-AGGGG TTCGTTTTATTTTTT CP0269 275548 - 275354 - | hypothetical protein TERM 272 275645 - 275631 - R 76 -4.4 -5.11063 | opp_overlap 275633, overlap 275634 ACTATTCAATAAAAA TATTTA TAT TAAATA TAATAAAACAAAATT CP0270 276616 - 275759 - | 3-deoxy-7-phosphoheptulonate synthase CP0271 279720 - 276619 - | hypothetical protein TERM 273 278246 - 278217 - G 80 -6.4 -4.82091 | opp_overlap 278235 278241, overlap 278220 AAGCAAAGAAAGAAA GAGCTGGAGACC AAGGGA GATCCCCAGATC GTCTGTTTTCTATAG TERM 274 278241 - 278251 + g 73 -5.4 -4.614 | opp_overlap 278220 278217, overlap 278235 ACCAAGGGAGATCCC CAGA TCG TCTG TTTTCTATAGTTGCA TERM 275 280125 - 280113 - g 100 -7.7 -5.58209 | TTAAATTTAAAAAAA CATCG TAT CGATG CAATTTTAGCAGGAA CP0272 279849 - 280628 + | amino acid ABC transporter, periplasmic amino acid-binding protein CP0274 282284 - 282940 + | hypothetical protein TERM 276 283209 - 283242 + G 88 -9.5 -4.33274 | opp_overlap 283221, overlap 283210 GAAATTAGTATTTTT AGGCACAGGAAATCC CGAA GGAATTCCCGTGCCG TTTTGCTCATGTAGA TERM 277 283210 - 283241 + G 95 -13 -3.19482 | opp_overlap 283221, overlap 283209 AAATTAGTATTTTTA GGCACAGGAAATCC CGAA GGAATTCCCGTGCC GTTTTGCTCATGTAG CP0275 283162 - 283974 + | metal-dependent hydrolase, putative TERM 278 284576 - 284596 + G 72 -9.7 -2.78384 | opp_overlap 284576 284595 TGAGCGTATCCATAA GCTGTCAGC ACA GCTGAAAGC TGTGATCAAACAGCG TERM 279 284596 - 284576 - g 76 -9.7 -3.36327 | opp_overlap 284576, overlap 284595 TGAGCGTATCCATAA GCTGTCAGC ACA GCTGAAAGC TGTGATCAAACAGCG CP0276 283962 - 285380 + | GTP-binding protein HflX, putative TERM 280 286273 - 286283 + G 81 -5.4 -5.20154 | opp_overlap 286263, overlap 286276 ATGAACCGGAAGTAT TCTC GCG GAGA TTTTTTAGATTGTGT CP0277 285481 - 286746 + | hypothetical protein TERM 281 287037 - 287025 - g 78 -9.1 -3.87149 | TCTATCAAAGGGAAA CTGCC TTC GGCAG CGCAAGCAGGGCCCC CP0278 286743 - 287732 + | hypothetical protein TERM 282 287833 - 287849 + G 71 -9.5 -2.9294 | overlap 287829 TTAGGGATCCTTGCT TCTGAAG ATT CTTCAGA TCATATTGTTATTTT TERM 283 288176 - 288191 + G 75 -5.4 -4.77757 | CCCATGCGCAGAGAG TCTCTG TAGT CGGAGA TTTTAATTTTTGGCA CP0279 287743 - 289905 + | glycogen branching enzyme TERM 284 290824 - 290804 - g 71 -8.3 -3.53444 | CGACGGTTTTGCAAA CGATACTCC ATA GTAGTATCG GAAAGTGGAGAGCCT TERM 285 291379 - 291358 - g 76 -2.9 -5.26918 | overlap 291363 ACAGTCTACAAAAAA CAGATTCAG AAGA CTGACGCTG CAATTCGTGAAGAGG CP0280 290014 - 291783 + | hypothetical protein TERM 286 291913 - 291930 + F 83 -2.1 -5.79595 | overlap 291923 291924 GTTTATTTTAATTTA TATTTTG TTTT TAAAATA TTTTTTATTTTAACA TERM 287 292292 - 292273 - g 73 -8.6 -3.5936 | overlap 292265 292264 292291 TGGAAAGGCGTTAAA GGGGTCTT TAAA AAAACCCC TCAAGCGCGTCCTGA TERM 288 292675 - 292718 + G 85 -6 -5.24531 | opp_overlap 292675 292680 292681, overlap 292681 292683 GGCGATACTGTAAAA GAAAGGCGTTCCGAAGAAGC AGAG GCTTCTTCGAAGAGTTCTTC TTTTTTATCAGGAGT TERM 289 292681 - 292712 + G 82 -8 -4.44307 | opp_overlap 292681 292680 292675, overlap 292675 292683 ACTGTAAAAGAAAGG CGTTCCGAAGAAGC AGAG GCTTCTTCGAAGAG TTCTTCTTTTTTATC CP0281 291994 - 293520 + | hypothetical protein TERM 290 293585 - 293556 - f 81 -9.5 -3.75629 | opp_overlap 293555 293553 293557 293581, overlap 293557 TATGCGCAAGGGAAA CTTGAAGAGTTTT AATT AAAACTCTTCAAT ATGTTGATTATTTTA TERM 291 293584 - 293557 - f 87 -13 -2.85056 | opp_overlap 293555 293553 293557 293581, overlap 293556 ATGCGCAAGGGAAAC TTGAAGAGTTTT AATT AAAACTCTTCAA TATGTTGATTATTTT TERM 292 293557 - 293584 + F 91 -13 -3.25762 | opp_overlap 293557 293556, overlap 293555 293553 293581 ATGCGCAAGGGAAAC TTGAAGAGTTTT AATT AAAACTCTTCAA TATGTTGATTATTTT CP0282 293682 - 296009 + | hypothetical protein TERM 293 296121 - 296143 + T 73 -7.1 -4.00532 | overlap 296120 TAAGATTCATGATGG TAGAGAGTG TTCAC TACTCTCTA TTTGGTCTTTACAGG CP0283 299023 - 296183 - | polymorphic membrane protein E/F family protein TERM 294 298416 - 298403 - G 77 -3.7 -5.19212 | opp_overlap 298403 298411 AGCATTATTAAAAAA CAGGC AAGG GCCAG TGTTGTCCTTAATGT TERM 295 300155 - 300166 + r 91 -4.4 -5.78622 | CTTCTACAATGAGAT TCGA AGTA TCGA TTTTTTTTGCAGTCA TERM 296 302077 - 302109 + r 70 -7.2 -3.8591 | TTTTGAGGGAGTCCT CTA-CCGATTGGGCTA ACG TAGCTCA-TCGGATAG TTGTTAATTCTAAAG CP0285 305008 - 302150 - | polymorphic membrane protein E/F family protein TERM 297 303907 - 303920 + g 71 -6.7 -4.19746 | ATCTACCAAATGTGG TGAGG AAAA CCTCA TTATTTTGAAATGCG TERM 298 304214 - 304226 + g 71 -4.7 -4.72201 | opp_overlap 304214 GTTGTTATTGAAAAT CACCG ACC CGGAG TTATTTTTTATCGCA CP0286 307863 - 305047 - | polymorphic membrane protein E/F family protein TERM 299 307806 - 307783 - G 79 -11.1 -3.13788 | opp_overlap 307783, overlap 307781 307779 ACTTAATGTAATATA GGTCTCCAA AGGAAG TTGGAGACC TTCATTAGCCAATAC TERM 300 307783 - 307806 + g 81 -11.1 -3.34344 | opp_overlap 307781 307779 307783 ACTTAATGTAATATA GGTCTCCAA AGGAAG TTGGAGACC TTCATTAGCCAATAC TERM 301 308095 - 308107 + H 73 -4.1 -4.93365 | opp_overlap 308081, overlap 308081 308096 AGCTCTTTGCATACT TTGCT TAG AGCAG TTTTTGGTTCTCAGG TERM 302 308279 - 308292 + H 70 -3.9 -4.86773 | TAAGAGCCACTTATC TCTAT TCCT ATAGA TTTTTGCTGATTTTG TERM 303 308365 - 308379 + H 73 -7.2 -4.00684 | opp_overlap 308365 308363 GTATTTTTTAAAAGA CTCATT TTT AATGAG TTATTACTTTTCTCT TERM 304 308614 - 308600 - g 70 -10 -2.56271 | overlap 308599 308597 GTGCGAGTAGAACAC GTCGTG GGT CACGAC CATAGAAGTCGAGTT TERM 305 308667 - 308652 - g 86 -9 -4.27886 | opp_overlap 308644, overlap 308644 TTCTAAAGAGACAAA GGCTCT CATT AGAGCC TAGAGACGAGGGGAA CP0287 308375 - 308719 + | hypothetical protein TERM 306 309141 - 309129 - g 75 -3.3 -5.14563 | overlap 309130 CTCCCTACGAAAAAA CGGAG CAG CTCCT GGGAACTCCAAACTG CP0288 308745 - 309224 + | hypothetical protein TERM 307 310056 - 310044 - g 82 -7.7 -4.56597 | opp_overlap 310043 310044 CGCTCCCTTCAAAAA CCTTC TGG GAAGG ATTCTTAGCATTCTG CP0289 309230 - 310399 + | hypothetical protein CP0290 310535 - 312553 + | hypothetical protein TERM 308 312619 - 312605 - f 71 -8.6 -3.03554 | opp_overlap 312605, overlap 312607 GGAACTAATTAGACA CACCTT TCT AAGGTG TTTGTTTTGATGAAC TERM 309 312605 - 312619 + F 93 -8.6 -4.72007 | opp_overlap 312605 312607 GGAACTAATTAGACA CACCTT TCT AAGGTG TTTGTTTTGATGAAC TERM 310 312665 - 312675 + F 84 -5.4 -5.4833 | overlap 312657 GCAGAGCTCTTTTTT GAAG ATT CTTC TTTTTTCTTAGGTCA CP0291 312949 - 313746 + | hypothetical protein CP0292 313747 - 314598 + | hypothetical protein CP0293 314582 - 314971 + | hypothetical protein CP0294 315267 - 317354 + | hypothetical protein TERM 311 317639 - 317665 + F 76 -4.4 -5.16472 | opp_overlap 317642, overlap 317643 TTTCTTGTGGCTATA GGAGTCGCTAAG TAT CTTAGAGATTGC TTTTTTCAAGTTTTT CP0295 317722 - 319611 + | hypothetical protein CP0296 319632 - 319754 + | hypothetical protein TERM 312 319937 - 319951 + F 71 -3.5 -5.11836 | overlap 319938 TTTGTTAGGAAAACG TGCTC AACAA GAGCG TTTTATTTTCAGTGT TERM 313 320310 - 320294 - g 77 -6.5 -4.62168 | opp_overlap 320293 320294 320296 ACTGAAAGTAGAAAA GATCGCG GGC CGAGATC ATATTTCTAGAATCG CP0297 320055 - 322133 + | hypothetical protein TERM 314 322449 - 322467 + T 100 -11.8 -4.1721 | opp_overlap 322449 CGGGGCTACAGAAAA CTCTAAGC AGA GCTTAGAG TTTTAAAATGTGGAT TERM 315 322467 - 322449 - T 100 -11.8 -4.52589 | opp_overlap 322449 CGGGGCTACAGAAAA CTCTAAGC AGA GCTTAGAG TTTTAAAATGTGGAT CP0298 325406 - 322470 - | polymorphic membrane protein H family protein TERM 316 325411 - 325400 - G 73 -5.8 -4.4572 | AAGATTTGAAAGAAA GAGG CATG CCTC AACCCTGTCGTTAAA CP0299 328420 - 325433 - | polymorphic membrane protein G family protein TERM 317 325769 - 325779 + g 77 -8.2 -3.95554 | opp_overlap 325767, overlap 325768 GTGTCCAAAAATCCT CCCC TCA GGGG TATTTTCTTGGATGC CP0300 328635 - 328540 - | hypothetical protein TERM 318 328620 - 328608 - G 71 -4.7 -4.61566 | overlap 328609 CTGTAAAGTAGAAAA TGGCG CTA CGCCC GAGACTCGTGAACAT TERM 319 328676 - 328647 - R 89 -13.7 -2.87683 | opp_overlap 328643 ACATGTGTGCATAGA GGGACCTATCTCT GAAT ACAGATAGGTCCC AAAATCTTCTTAAAG CP0301 330269 - 328725 - | polymorphic membrane protein G family protein TERM 320 330496 - 330516 + r 100 -11.2 -4.13014 | opp_overlap 330496 AAAAGTATGAGAAAA CTCCCTAG AAGAA CTAGGGAG TTTTAGCAATCTAGA TERM 321 330516 - 330496 - R 100 -11.2 -4.53607 | opp_overlap 330496 AAAAGTATGAGAAAA CTCCCTAG AAGAA CTAGGGAG TTTTAGCAATCTAGA CP0302 333376 - 330527 - | polymorphic membrane protein G family protein TERM 322 331109 - 331120 + g 74 -4.4 -4.99035 | CAAGGCTAGGGGAAT TTCC CTAG GGAA TTTTTCTATAGCTGA TERM 323 333783 - 333800 + G 71 -7 -4.19624 | overlap 333788 TAAATATTAAGTCTA GTGCTG AAGGCG CAGCAC TTTCTGTTACAACTG TERM 324 333989 - 333979 - g 74 -6.8 -4.26076 | opp_overlap 333979 TTACTGTGAGGAAAA TGGC GGA GCCA TTTCTACCAAGAATC CP0303 333476 - 336262 + | polymorphic membrane protein G family protein TERM 325 336412 - 336366 - T 83 -7.3 -4.7254 | gap 1, opp_overlap 336374 336407, overlap 336367 336368 336371 336373 336374 ATCGGGGATTAAAAA GGCAAGA-GGGCAGAGTTCGTG AGGT CACGTACTCTGCCTTTCTTGTT ACAAACACGTTTTAA TERM 326 336411 - 336367 - T 87 -10.8 -3.43042 | gap 1, opp_overlap 336374 336407, overlap 336366 336368 336371 336373 336374 TCGGGGATTAAAAAG GCAAGA-GGGCAGAGTTCGTG AGGT CACGTACTCTGCCTTTCTTGT TACAAACACGTTTTA TERM 327 336410 - 336368 - T 93 -14.3 -2.65504 | gap 1, opp_overlap 336374 336407, overlap 336367 336366 336371 336373 336374 CGGGGATTAAAAAGG CAAGA-GGGCAGAGTTCGTG AGGT CACGTACTCTGCCTTTCTTG TTACAAACACGTTTT TERM 328 336406 - 336371 - T 85 -10.4 -3.47218 | opp_overlap 336374, overlap 336368 336367 336366 336373 336374 GGATTAAAAAGGCAA GAGGGCAGAGTTCGTG AGGT CACGTACTCTGCCTTT CTTGTTACAAACACG TERM 329 336404 - 336373 - T 91 -13 -3.29762 | opp_overlap 336374, overlap 336371 336368 336367 336366 336374 ATTAAAAAGGCAAGA GGGCAGAGTTCGTG AGGT CACGTACTCTGCCT TTCTTGTTACAAACA TERM 330 336374 - 336403 + T 100 -16.5 -4.44667 | opp_overlap 336374 336373 336371 336368 336367 336366 TTAAAAAGGCAAGAG GGCAGAGTTCGTG AGGT CACGTACTCTGCC TTTCTTGTTACAAAC TERM 331 336403 - 336374 - T 100 -16.5 -2.56773 | opp_overlap 336374, overlap 336373 336371 336368 336367 336366 TTAAAAAGGCAAGAG GGCAGAGTTCGTG AGGT CACGTACTCTGCC TTTCTTGTTACAAAC TERM 332 336579 - 336593 + T 100 -10 -5.04249 | overlap 336588 336591 AAGATTAGAGTTGCA GAGACG GTA CGTCTC TTTCTTTTTTAAGGG CP0304 336742 - 336620 - | hypothetical protein TERM 333 337786 - 337798 + G 71 -6.9 -4.11664 | GAGACTTTCTTTGAG CCCGC AAT GTGGG TTTGCTTCTTGTGAG CP0305 336779 - 337894 + | hypothetical protein TERM 334 338020 - 338003 - T 70 -4.1 -4.82667 | opp_overlap 338018 TTAGTATACTAAAAA GTCTTTG GATT CTAAGAC GGGCGGAGTTCGTGA TERM 335 338018 - 338056 + T 100 -10.3 -4.3767 | gap 1, opp_overlap 338003 338020, overlap 338020 338021 GTCTTTGGATTCTAA G-ACGGGCGGAGTTCGTG AGAT CACGTACTCTGCCCATTC TTTCTTGTGATCTAG TERM 336 338053 - 338020 - T 88 -13.1 -3.05844 | opp_overlap 338018 338020 338021 CTTTGGATTCTAAGA CGGGCGGAGTTCGTG AGAT CACGTACTCTGCCCA TTCTTTCTTGTGATC TERM 337 338020 - 338053 + T 100 -13.1 -4.29119 | opp_overlap 338020, overlap 338018 338021 CTTTGGATTCTAAGA CGGGCGGAGTTCGTG AGAT CACGTACTCTGCCCA TTCTTTCTTGTGATC TERM 338 338021 - 338052 + T 100 -16.6 -3.16387 | opp_overlap 338020, overlap 338020 338018 TTTGGATTCTAAGAC GGGCGGAGTTCGTG AGAT CACGTACTCTGCCC ATTCTTTCTTGTGAT CP0306 341021 - 338235 - | polymorphic membrane protein G family protein TERM 339 339209 - 339229 + g 80 -6.1 -4.84359 | AGGTTCCACGACGCT CAGGATTCG GAT TGTATCCTG TTTTTGTCCAGGTAA TERM 340 340510 - 340524 + g 78 -10 -3.50853 | opp_overlap 340503 CTGATAGAGCTGCCT TGGAGG GCG CCTCCA TTGTCATTAGAAAAG TERM 341 341162 - 341137 - R 100 -14.9 -3.78934 | GGGTTTTTATAAGAA TTCCTCCCTAA AAGT TTAGGGAGGAA AGTAGGAACTAGAAT CP0307 343963 - 341171 - | polymorphic membrane protein G family protein TERM 342 343147 - 343161 + g 84 -6.4 -5.03314 | opp_overlap 343149, overlap 343149 CAGAGATAGTAAGAG TAGGAG TCT CTCCTG TTTTTTCACAATAAA TERM 343 343149 - 343159 + g 71 -6.8 -4.14633 | opp_overlap 343149, overlap 343147 GAGATAGTAAGAGTA GGAG TCT CTCC TGTTTTTTCACAATA CP0308 346817 - 344007 - | polymorphic membrane protein G family protein TERM 344 345520 - 345530 + g 71 -3.2 -4.96848 | overlap 345515 345529 GTAGAGGTGACGTTT GCAG CGA TTGC TTTTTCTGTAGGGGA TERM 345 347091 - 347050 - R 77 -5.5 -4.84359 | gap 1, opp_overlap 347066, overlap 347051 TCATCTTTATAAAAA GTATGTTTTTCTAAGATTCT CGG AGAATCTTAGAAAGA-ATAA CGAGTTCCACAGTTT TERM 346 347090 - 347051 - R 75 -9 -3.50133 | gap 1, opp_overlap 347066, overlap 347050 CATCTTTATAAAAAG TATGTTTTTCTAAGATTCT CGG AGAATCTTAGAAAGA-ATA ACGAGTTCCACAGTT CP0309 350909 - 347079 - | polymorphic membrane protein G family protein TERM 347 347342 - 347321 - G 80 -8.7 -3.91028 | opp_overlap 347321 347318 AACCTAAAGTAAGAA GCAAAGCAC TGGG GGGCTTTGC TGATTCGTGTTTGAA TERM 348 350309 - 350319 + g 75 -2.4 -5.32882 | opp_overlap 350307 350309, overlap 350307 TTGCTGTACTACAGA GGGC CCC GCCA TTTTTTGTGCTAGTA TERM 349 350969 - 350941 - R 77 -6 -4.72272 | opp_overlap 350946, overlap 350943 GCTTTTTATCAAAAA TACTCCCATAGC ATGTG GCTTTAGGAGCA TGGTGCACCAATAGA CP0310 352467 - 351214 - | hypothetical protein TERM 350 352293 - 352316 + g 71 -6.8 -4.2243 | gap 1, opp_overlap 352293, overlap 352285 CCGCAAGGGCAATAA TGC-CTGTGTC ATA GACATAGCGCA TTTTAGGATATTTAT TERM 351 352606 - 352625 + r 70 -4.4 -4.66163 | overlap 352587 352608 ATTAAATAAAGTTTA TTTGTTAA AATC TTAACAGA TTTTTAACTAAAACT TERM 352 352630 - 352648 + r 74 -3.2 -5.27938 | ATCTTAACAGATTTT TAACTAAA ACT TTAAGTTA TTTTTATTTGGAACT CP0311 353183 - 352665 - | hypothetical protein CP0312 354305 - 353355 - | hypothetical protein CP0313 355091 - 354453 - | hypothetical protein CP0314 355643 - 355116 - | hypothetical protein trmU 355780 - 356865 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase CP0316 359380 - 356843 - | ATP-dependent Clp protease, ATP-binding subunit TERM 353 356928 - 356944 + g 75 -8.7 -3.61398 | TTTTCAACCAAGGTT GCTCGTA GCT TGCGAGC TTCTTGACGGCAGGA TERM 354 357945 - 357964 + g 84 -3.6 -5.49569 | gap 1 CATTCCTGTTTCATA CTTTGCAGA CGT TC-GCGAAG TTTTTTCTCTTCATC TERM 355 358623 - 358635 + g 77 -4.9 -5.00616 | AAGGCATCAGGAACC TCATT CAG AATGA TTTTTTGAGCCAGAC TERM 356 358815 - 358832 + g 78 -5.6 -4.82678 | opp_overlap 358814 358827, overlap 358827 AAATCATAACCATAT GCTTTC AGAGCA GAAAGC TTTTCGTTTTTGTCA CP0317 359578 - 360297 + | hypothetical protein CP0318 360294 - 361724 + | phospholipase D family protein TERM 357 361745 - 361787 + G 86 -3.4 -5.74122 | gap 1, opp_overlap 361749, overlap 361770 361771 361772 CTGGGTGCGAATCTA CCA-ACAGGATCTCTTCTG CAGGCT CTGCAGGGATCCTGCCTGG TTTTTTTCTCTGCTA TERM 358 361977 - 362020 + G 72 -7.6 -3.78022 | gap 1, overlap 361990 TCCACCTCACGTCGG ACTGTTTTTAC-TACCGCTTC AGG GAAGCGGTATGTAGAGAAAGA TTTCATGGCTATGAA TERM 359 361990 - 362006 + G 89 -12.3 -2.87211 | overlap 361977 GGACTGTTTTTACTA CCGCTTC AGG GAAGCGG TATGTAGAGAAAGAT TERM 360 362341 - 362351 + G 76 -6.8 -4.56597 | overlap 362337 AAGGATTTCTTGCTA GAGC CAA GCTC TTTTTAGAAGAGAGA CP0319 361734 - 363923 + | hypothetical protein CP0320 363923 - 364270 + | glycine cleavage system protein H CP0321 364380 - 364685 + | hypothetical protein TERM 361 364795 - 364810 + G 79 -7.6 -4.25053 | GGTATTCTAGTGTCC TTCTCC ATTC GGAGAA TTCTTTATCTTATCG CP0322 364713 - 365048 + | hypothetical protein CP0323 365870 - 365100 - | Na(+)-translocating NADH-quinone reductase subunit E CP0324 366515 - 365874 - | Na(+)-translocating NADH-quinone reductase subunit D CP0325 367474 - 366512 - | Na(+)-translocating NADH-quinone reductase subunit C TERM 362 367201 - 367216 + g 74 -6.2 -4.45201 | overlap 367192 367191 AGACTTTTTTTGTAG CAACTT CAAG AAGTTG TGTTTTTTTATCGAA CP0326 368989 - 367478 - | Na(+)-translocating NADH-quinone reductase subunit B TERM 363 367838 - 367801 - G 73 -9.1 -3.53019 | opp_overlap 367800 367805, overlap 367799 TGATAAACTTAAAGA GCCAGCCTGTGAGAAAG GCTC CTATCCCAAAGGCTGCC ATGGTTCTCCAAGAG TERM 364 369184 - 369172 - g 74 -6.3 -4.57341 | AACTGCTTGGAAAAA CTTCT CGT AGAAG ATAGAGAAGGGCGTT TERM 365 369347 - 369357 + G 82 -2.4 -5.61596 | overlap 369338 GTGAAGGTAAGCGAC CCGC TCT GCAG TTTTTTTCTAAGAGT TERM 366 369547 - 369532 - g 82 -4.7 -5.26155 | overlap 369524 AGACAAATAGAAAAA CTTCC TAAAGG GGAAG GTATCTGCTTTTTGT CP0327 369085 - 369663 + | hypothetical protein CP0328 370216 - 369629 - | hypothetical protein dnaA 371635 - 370232 - | chromosomal replication initiation protein TERM 367 370501 - 370512 + g 95 -3 -5.92399 | opp_overlap 370477, overlap 370507 CACTTTTTAAGATCG TTTC TACA GAAA TTTTTTGTTTTGTTG TERM 368 371672 - 371694 + r 74 -9.2 -3.09671 | ATTGCATCTTGACTA TTCATTGCAC TGA GTGCAATGAC TCTTCGCGTTCAGAT CP0330 372405 - 371977 - | hypothetical protein TERM 369 372116 - 372131 + g 71 -4 -4.87803 | TCAATTCGTCCCAAA CAGAAG AGAG CTTTTG TTTTATTTAAGAGTG CP0331 372954 - 372409 - | hypothetical protein CP0332 373180 - 373061 - | hypothetical protein mraW 373198 - 374091 + | S-adenosyl-methyltransferase MraW CP0334 374088 - 374375 + | hypothetical protein CP0335 374362 - 376323 + | penicillin-binding protein TERM 370 376387 - 376369 - f 83 -9.6 -3.73224 | opp_overlap 376368 376362 TTACCGTTGAGCAAA GACTCTCT ATC AGAGAGCC CGTTCTCCTCTTTAT TERM 371 376740 - 376752 + F 77 -6.2 -4.82901 | opp_overlap 376739 TCAGAGTGAGAGCAT GCCC CTAGA GGGC TTTTTATGAAAAAAG TERM 372 378086 - 378070 - gf 77 -3.7 -5.08824 | overlap 378073 GTTTTATTCAAAAAA CTATTTC ATC GAAATCG ACAGAAAACAAGCAA murE 376796 - 378247 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase CP0337 378162 - 378956 + | N-acetylmuramoyl-L-alanine amidase, putative CP0338 379341 - 379643 + | integration host factor beta-subunit, putative TERM 373 379671 - 379708 + F 100 -12.2 -5.3798 | gap 1 TCTTTGTCTCAGTTG TTAGAGTC-AGACCGGT TTTTT ACCGGGCTTGACTCTAA TTTTTGTTATTATTA TERM 374 380654 - 380682 + G 77 -4.6 -4.95843 | gap 2, overlap 380645 380653 ATCGCGTGCACGCTG CGT--TGGCTGAGG CCA CCTCTGCCATGACG TTTTCTATTTTCTGT TERM 375 380841 - 380865 + G 83 -8.7 -4.13767 | opp_overlap 380840 380841 TCCCTATATGGAAAT TTTTGCTTTGC AAG GCAAAGAAAAA TTTTGGAATGCAGAC CP0339 379765 - 380979 + | hypothetical protein TERM 376 381151 - 381117 - gf 73 -7.4 -3.76393 | overlap 381125 ATAGCCGAATTTAAA GAAAAAAATAAGAAAA ATT CTCTCTTATCTTCTTC AGAGATTCAGAAATT TERM 377 381143 - 381125 - gf 95 -3.2 -5.96894 | overlap 381117 ATTTAAAGAAAAAAA TAAGAAAA ATT CTCTCTTA TCTTCTTCAGAGATT CP0340 381054 - 382028 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 378 382081 - 382099 + GT 91 -4.6 -5.63517 | overlap 382083 ATTTTAGGACTTACC TTTTCATC TCA GATGGAGA TTTTTTCTTTAGGGA TERM 379 383485 - 383469 - gT 89 -10.9 -3.68073 | TACTGTATGGAATAA CCTTACC TGT GGTAAGG ATATGGAGGAGGAGG TERM 380 383837 - 383825 - gT 71 -3.3 -5.08011 | overlap 383826 AAAATGGTCAAAAAA TTGCC GAA GGCAC AAAAGAAGAACTCTT CP0341 381994 - 383973 + | ABC transporter, ATP-binding protein CP0342 384607 - 383948 - | hypothetical protein CP0343 385364 - 384585 - | hypothetical protein CP0344 386074 - 385361 - | DNA polymerase III subunit epsilon CP0345 386552 - 386067 - | hypothetical protein CP0346 387092 - 386613 - | hypothetical protein TERM 381 387382 - 387367 - g 100 -9 -4.60797 | CTTTCATAGACAAAA CGACAG CAGT CTGTCG GTGGATGCAAAGAAT CP0347 387279 - 387470 + | hypothetical protein TERM 382 387747 - 387758 + G 77 -3.6 -5.09225 | overlap 387755 AAGATTGTATGGAGG GGGC AACG GCTC TTTTTTCCGTGGAAT TERM 383 388262 - 388305 + G 74 -10.4 -2.6472 | gap 1, opp_overlap 388279, overlap 388279 388304 CATGCGGACTTTCTA GCTCCCCCAGCAGATAAGAAT GGC ATTCTT-TCAGCTTGGGAAGC TGGTGTCCGCTATTA CP0348 387455 - 388342 + | hypothetical protein CP0349 389228 - 388329 - | enoyl-(acyl carrier protein) reductase CP0350 389458 - 390234 + | hypothetical protein CP0351 390310 - 391329 + | hypothetical protein CP0353 392203 - 393312 + | A/G-specific adenine glycosylase CP0354 393313 - 393705 + | mazG protein, putative CP0355 394661 - 393888 - | hypothetical protein TERM 384 394565 - 394535 - G 76 -6.8 -4.4634 | opp_overlap 394537, overlap 394532 394537 AAGAAAAAACAAGAA GAGCACCACCAAAT AAA ACTTGGCGGAGCTT TAAAGGTGTTTTCCC TERM 385 394563 - 394537 - G 81 -9.4 -3.78069 | opp_overlap 394537, overlap 394535 394532 GAAAAAACAAGAAGA GCACCACCAAAT AAA ACTTGGCGGAGC TTTAAAGGTGTTTTC CP0356 395318 - 394671 - | hypothetical protein TERM 386 395139 - 395115 - G 70 -7.9 -3.72893 | GATCTCTTCAGTAAA TTCTCCTTGGA GGT TCCAAGGTAAA GGTTCAAGACTCTTT CP0357 395664 - 395494 - | hypothetical protein TERM 387 395778 - 395748 - H 93 -12.8 -3.35867 | opp_overlap 395746 TGAACTTCTAAGGAA CACCATGAGTTT GTGATTA AAACTCATGGTG CGTAGTTGAACCCTT TERM 388 396627 - 396647 + G 77 -8.4 -3.98661 | GCCTGACATTCGGAA TCTTCCTT GTGAA AAGGAAGA TTTGTACTGCCTCTG TERM 389 396719 - 396683 - g 71 -8.2 -3.55378 | overlap 396681 ATGGATTGACAAACA TGGTTCCAGATATC GATATTCGT GATATCTTGAACCA GCCCGCCACCCTAGA CP0358 396082 - 396819 + | serine/threonine protein phosphatase, putative TERM 390 396926 - 396911 - g 78 -5.4 -5.01732 | opp_overlap 396886 AATTTCTCCAAAAAA CCTTCC TTAT AGAAGG GACGTACGCGAATCC TERM 391 397854 - 397869 + G 73 -2.5 -5.08255 | opp_overlap 397848 397846 TGATGAAGAGTTGAC CCTGG CAACAC TCAGG TTTTCTTTTAGCCAT CP0359 396844 - 397959 + | nifS protein, putative CP0360 399233 - 398019 - | hypothetical protein CP0361 400461 - 399226 - | hypothetical protein TERM 392 399327 - 399341 + g 77 -8.6 -3.93262 | GTTTCATTCCTGTTG TCGGAA TCG TTCCGA TTTGCTCTATTAACC CP0362 400818 - 400471 - | hypothetical protein dcd 401383 - 400811 - | deoxycytidine triphosphate deaminase TERM 393 401536 - 401522 - g 74 -4.2 -5.05116 | GTATAAACAAGAAAA GCCTAT CCC AAAGGC TACAATTTTATCACG CP0364 401505 - 401690 + | hypothetical protein ruvB 402053 - 403066 + | Holliday junction DNA helicase B CP0366 403063 - 403881 + | hypothetical protein CP0367 405868 - 403874 - | glycosyl hydrolase family protein TERM 394 403923 - 403949 + g 74 -8 -4.07568 | AGCGTGGTATGGGGC TGTAGCGACACT GTC GGCGTTGCTACA TTTTGAGGGACAAAC TERM 395 405604 - 405614 + g 70 -5.4 -4.57569 | CTTTAAAAGAGTATT GCAT TCC ATGC TTTTTAGGCCCATGA CP0368 406001 - 406501 + | hypothetical protein CP0369 406672 - 407154 + | single-strand DNA-binding protein TERM 396 407291 - 407271 - g 73 -2.6 -5.12617 | gap 1, opp_overlap 407260 407272, overlap 407262 407272 407273 407275 TAAGGATGCAAAAAA TGCAGCTTC TTTT GAAGCCG-A GTTTGAACCCTCGTA TERM 397 407891 - 407904 + G 71 -6.7 -4.10612 | TTTCCAAGGGTTCTT GTGTG GATC CACAC TTTATCGTTGTCCGT CP0370 407179 - 408678 + | leucyl aminopeptidase TERM 398 408708 - 408742 + F 100 -11.1 -6.09888 | opp_overlap 408708 TTTATGTTTTAGTAA TGACTTTTATTTTAG TTTTT TTAAAATAAAAGTCA TTTTTTTTATTAAAG TERM 399 408742 - 408708 - f 83 -10.4 -3.14931 | opp_overlap 408708 TTTATGTTTTAGTAA TGACTTTTATTTTA GTTTTTT TAAAATAAAAGTCA TTTTTTTTATTAAAG CP0371 408820 - 409338 + | Hc2 nucleoprotein TERM 400 409370 - 409400 + F 93 -6.9 -5.61881 | gap 1, opp_overlap 409377 409378 TATTGCTCATGTTAA CGGGAAAGGGAAAC ATTG GGTTTCC-TTCCCG TTTTTCTTTTTAAGG CP0372 409504 - 410451 + | hypothetical protein TERM 401 410644 - 410659 + G 71 -3.2 -4.96848 | overlap 410646 410651 GTAAACATGCGCGCC TCCCTA AGGC TTGGGA TTTTTATCTAGAGCC CP0373 410448 - 411164 + | tetrapyrrole methylase family protein CP0374 411560 - 411330 - | hypothetical protein CP0375 411595 - 413163 + | hypothetical protein TERM 402 413366 - 413338 - T 75 -8.9 -3.37028 | opp_overlap 413365 AGGAATATCCCATAA TCTCTTCCGCTAT TGT ATCGTGGAAGAGA CGGCCCTGTCTATTT CP0376 414502 - 413318 - | coproporphyrinogen III oxidase TERM 403 414266 - 414254 - GT 74 -4.1 -5.00616 | TCCCCCTCCAAAAAA CACAG TCT CTATG AAATGCGTCTCTTGG TERM 404 414285 - 414305 + gT 71 -9 -3.14878 | overlap 414284 TGCGTCTCTTGGATG GGGGCTAG CTTTC TTAGCCCC TCTTGAATTACAGCA CP0377 414875 - 414429 - | hypothetical protein TERM 405 415121 - 415135 + G 76 -2.8 -5.41143 | overlap 415123 TCACGAGACTTTGGA TCCTTC TTG GAAGTA TTTTTTTGAAGGGTA TERM 406 415471 - 415487 + G 82 -8 -4.4572 | AAACCCTAACATGTA CTCCTG AGTTG CAGGAG TTTGTTTGGAATCTT TERM 407 416806 - 416792 - g 76 -10 -3.37236 | AATCGAAGGGTACAA CCTGAG ACT CTCAGG TCAAGATTCTATTCG TERM 408 416896 - 416922 + G 100 -14.6 -3.04188 | overlap 416886 CTCCATTGTACCATC TTTCTGCAGAGC AGG GCTCTGTAGAAA TGTATAATTCTCCTC kgd 415029 - 417755 + | alpha-ketoglutarate decarboxylase TERM 409 418257 - 418275 + G 71 -3.1 -4.98531 | opp_overlap 418272 CTCACGACATTCAAT GAGGTCT ATATG ACACCTC TTTTTCATTTGCGAA CP0379 417759 - 418853 + | dihydrolipoamide acetyltransferase TERM 410 418864 - 418895 + T 90 -8.2 -5.10077 | gap 1, opp_overlap 418873, overlap 418873 TGTAATTTCTCTGAT TCTCATAAAGGCTCT TTT AGAGCCTTT-TCAGA TTTTTTAACCTCTTT TERM 411 418873 - 418887 + T 100 -10 -4.33739 | opp_overlap 418873, overlap 418864 TCTGATTCTCATAAA GGCTCT TTT AGAGCC TTTTCAGATTTTTTA TERM 412 418887 - 418873 - T 83 -10 -3.87815 | opp_overlap 418864 418873 TCTGATTCTCATAAA GGCTCT TTT AGAGCC TTTTCAGATTTTTTA CP0380 419343 - 418900 - | hypothetical protein CP0381 420076 - 419579 - | hypothetical protein CP0382 420979 - 420233 - | hypothetical protein CP0383 422817 - 420976 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 413 421424 - 421443 + g 73 -7.2 -4.24183 | opp_overlap 421407 AGAGCTCCAAACTCT GTTGCTAT GGAA ATAGCAGC TTCTTCTTTATTGTC CP0384 423153 - 423046 - | hypothetical protein CP0385 423510 - 423193 - | hypothetical protein TERM 414 423539 - 423552 + r 70 -3.9 -4.90471 | TTTCTATGACAAGCC CTATA ATTT TATAG TTTTCTATTTTAAAT TERM 415 423618 - 423596 - R 80 -9.2 -3.6053 | opp_overlap 423615 TGTTTTACAAATTAA TCTCCTACTA AAA TAGGAGGAGA CACTCTCATATTTTC CP0386 424050 - 423691 - | hypothetical protein CP0387 425397 - 424282 - | hypothetical protein CP0388 426846 - 425632 - | hypothetical protein TERM 416 426663 - 426651 - G 79 -3.3 -5.26316 | overlap 426653 CTACGGCAGAAAAAA TAGGC ATA GCCAA AATGCCAGCAGCAAT CP0389 427059 - 426961 - | hypothetical protein CP0389.1 427407 - 427087 - | hypothetical protein CP0390 428095 - 427358 - | hypothetical protein TERM 417 427953 - 427915 - GR 75 -8.2 -3.78034 | overlap 427912 GAGGCATACCAAGAA CTCCAGCAACAACTGCAG TCC CTACAGCTATGGCTAAAG CAAGAATAAGAGCTG TERM 418 428137 - 428153 + r 70 -2.3 -5.34309 | overlap 428138 428139 ATATCTTAATTTGTT GTTTTTT ACA AAAAATC TTTTTCTTTGATAAT TERM 419 428257 - 428279 + r 84 -6.2 -5.27923 | opp_overlap 428257 TAGTTCATAAGAGAA CTCTAAGTGG GTG CCACACAGAG TTTTTTCTCCACTTG TERM 420 428279 - 428257 - R 75 -8.4 -3.75824 | opp_overlap 428257 TAGTTCATAAGAGAA CTCTAAGTGG GTG CCACACAGAG TTTTTTCTCCACTTG CP0391 429221 - 428754 - | hypothetical protein TERM 421 429282 - 429300 + r 74 -3.2 -5.23292 | opp_overlap 429286, overlap 429276 429286 TAATTTAATTTTTAT TAGAGAAT AAA ATTCTATA TTTTCTTTTGTGTAA TERM 422 429513 - 429525 + r 77 -5.5 -4.88736 | TGGAAAGATCTTGGA GGCTT TAG GAGCC TTTTTGTCCCTCATC CP0392 430684 - 429650 - | hypothetical protein TERM 423 430000 - 430012 + g 78 -9.1 -3.85969 | overlap 429994 429992 AACGTTCTCCTGAAT CTCCC GCA GGGAG TTCTGTATTTATTTC CP0393 431231 - 430956 - | ferredoxin TERM 424 432032 - 432012 - g 95 -2.5 -6.28401 | opp_overlap 432012 432014, overlap 432014 CAAAAAACAAAAAAA TGCCCTTAT AGA AGAAGGGGA TTTCTTCTCTGCCAT TERM 425 432075 - 432097 + G 79 -7.8 -4.30576 | TCGTTTTGTTAAAGG GGATGCAATT ATT AGTTGTATCC TTTTACTCGTGAACG CP0394 431509 - 433257 + | type III secretion system protein CP0396 434417 - 434094 - | hypothetical protein CP0395 433372 - 434145 + | RNA polymerase sigma factor sigma-28 TERM 426 434748 - 434770 + G 75 -9.1 -3.72576 | TTGAAGAGACTCGCT GCTCTGGGG ATTAC CCCCATAGC TTTAGTCGGGGGAGC TERM 427 435187 - 435217 + G 100 -11.8 -4.16016 | opp_overlap 435187 435186 TTATTCGCCGTAAAG GGTTGGGTCAGGCC TAC GGCCTTACCTATCC TTTATTAACGAATGC CP0397 434580 - 435818 + | tyrosyl-tRNA synthetase CP0398 435839 - 437278 + | 6-phosphogluconate dehydrogenase TERM 428 437316 - 437289 - T 89 -3.4 -5.95286 | gap 1, opp_overlap 437289 AGTAAAAATAAAAAA TCTCGAGAAGACC CTA GGTAG-CTCGAGA TTTAGTTCACCACTA CP0399 439185 - 437377 - | GTP-binding protein LepA CP0400 439446 - 439622 + | hypothetical protein CP0401 439880 - 440731 + | hypothetical protein CP0402 440738 - 441091 + | hypothetical protein CP0403 441125 - 441241 + | hypothetical protein CP0404 441302 - 442609 + | hypothetical protein TERM 429 442710 - 442735 + T 76 -9.8 -2.81072 | overlap 442709 442727 TCAGCAGGGAGGACT CGTCTTCTTC AGGTTG GGAGAAGACG CTTCTCTTGAGTGGA CP0405 444078 - 442687 - | hypothetical protein TERM 430 443374 - 443390 + g 73 -5.1 -4.68384 | ATCACTAAGGTCTTC TTCGAGG CTG CCTCCAA TTTTCTTAACTCGAT CP0406 444304 - 444059 - | hypothetical protein TERM 431 444100 - 444113 + g 73 -2.5 -5.10208 | TATTAATAGAAATGT TTTTA TTTT TAAAA TTTTTATTGAAATTG TERM 432 444178 - 444201 + g 82 -4.6 -5.40072 | opp_overlap 444165 444181, overlap 444181 TAGCTTCTAGAAGAA GAATAACGAG AGAG CTTGTTATGC TTTTTTTAAAAAAAG TERM 433 444249 - 444261 + g 74 -4.9 -4.8543 | TCTTTTCCCGATTGG GAATA ACG TATTC TTTTTATAAAAATTA TERM 434 444381 - 444398 + r 80 -2.7 -5.75478 | overlap 444359 ATAGGGAAGATCGTA TAGGGAG ACTG CTTTCTA TTTTTTTCTCTAGTT CP0407 445644 - 444364 - | hypothetical protein TERM 435 445041 - 445055 + g 73 -3.6 -4.93877 | overlap 445036 AGGGCCCAAGTAAAC CATAAA CTT TTTGTG TTTTATTTAATCCGA TERM 436 445645 - 445657 + r 74 -6.3 -4.4078 | ACCAGAATGTCTCAC GGTTA TTA TAACC TTTTGATTGAAAAAA TERM 437 445737 - 445710 - R 100 -12.8 -6.11243 | AGTTAATAAAAAAAA TCCCTACCCACT AAAA AGCAGGTAGGGA TCAACAAGAGTAAGA CP0408 447309 - 445762 - | ADP, ATP carrier protein TERM 438 447337 - 447348 + r 82 -3 -5.72053 | AAATACTTTTATTTT CTAT TCTG ATAG TTTTTTATTTCGTTG CP0409 448025 - 447510 - | hypothetical protein CP0410 448396 - 448193 - | hypothetical protein TERM 439 448640 - 448659 + G 70 -9.4 -2.79273 | opp_overlap 448638, overlap 448639 448642 TCCTTGTATACTATC CATGAATC GCAT GATTCATG ATTGTGTTGAAAGAG CP0411 448512 - 449495 + | ABC transporter, periplasmic substrate-binding protein, putative CP0412 449479 - 450258 + | ABC transporter, ATP-binding protein TERM 440 451200 - 451214 + G 79 -8.6 -4.2243 | opp_overlap 451200 TCAAAGGATCAAGAA CACCTT TTA AAGGTG TTTTGGCATATTTCT TERM 441 451214 - 451200 - g 75 -8.6 -3.79909 | opp_overlap 451200 TCAAAGGATCAAGAA CACCTT TTA AAGGTG TTTTGGCATATTTCT CP0413 450252 - 451607 + | ABC transporter, permease protein, putative CP0414 451607 - 452581 + | ABC transporter, permease protein, putative TERM 442 452823 - 452835 + G 70 -2.7 -5.0133 | GGCTTCTTATGGAAA TAATC TAA GGTTA TTTTTTCAGCAACTA CP0415 452710 - 453849 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 443 454130 - 454140 + G 75 -3.2 -5.17353 | ACTCTGTCTATGATA TTCC TCA GGGA TTTTTTAGTAAGTCT TERM 444 454574 - 454554 - g 78 -10.5 -3.33696 | overlap 454557 454572 GGTGCCCCTAACGAA GAACTCTCC TAT GGAGAATTC AGAGCTACGTCCGAA CP0416 453862 - 455727 + | zinc protease CP0417 456661 - 455684 - | hypothetical protein TERM 445 456237 - 456262 + g 80 -4.7 -5.2166 | GTAGACCCTGCGTTC GGAGGAGCCAT GAGA ATAGCTTTTCC TTTTTTGGCTTCTTC TERM 446 457889 - 457900 + r 72 -5.8 -4.27441 | overlap 457877 GTGACCTAAAGGATT CTCC TTAG GGAG TTTATTAATCATCAT CP0419 459005 - 457905 - | DNA polymerase III subunit beta TERM 447 458178 - 458163 - G 73 -2.6 -5.09762 | gap 1, opp_overlap 458170 458173, overlap 458165 GGGTAAGAAAGAAAA CT-TCAC GGA GTGAGAG GACTCATTTGTAAAT TERM 448 458297 - 458281 - G 70 -7.3 -3.87075 | ATGACGGGGGAGAAA TCTGGAA ATT CTCCAGA AAGAAGTTTTGTGAT CP0420 459035 - 459184 + | hypothetical protein TERM 449 459278 - 459268 - g 71 -4 -4.85599 | CTTATGGCACAAAAA GAAA TTG TTTC TAATCGCAAGGCTCT TERM 450 459643 - 459631 - g 84 -6.3 -5.00616 | TGTCGTGGGAAAAAA GCTTA TGA TAAGC GTCGTACGATCATAG smpB 459214 - 459711 + | SsrA-binding protein CP0422 460633 - 459689 - | thiamine biosynthesis lipoprotein CP0423 461466 - 460606 - | methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase TERM 451 460674 - 460688 + gr 76 -10 -2.78395 | opp_overlap 460671, overlap 460672 TCATGGGACCAACGC CTCCAG GAA CTGGAG TGATTGCTGCGCATT CP0424 461921 - 461457 - | hypothetical protein TERM 452 462125 - 462139 + H 70 -2.2 -5.27477 | overlap 462126 TTAGATTAAAATTAG TTTATT CTT AATAAG TTTTTTAATTAAAAT CP0425 462193 - 462486 + | hypothetical protein TERM 453 462536 - 462509 - f 95 -3.4 -6.28631 | gap 1, overlap 462517 TAAATTAAAAAAAAA TCGCAGAACGGGA CTA TCCCGTGATG-GA ACGACAGGAAGCCTG TERM 454 462529 - 462517 - f 79 -9.1 -3.47063 | overlap 462509 AAAAAAATCGCAGAA CGGGA CTA TCCCG TGATGGAACGACAGG TERM 455 462617 - 462575 - f 100 -18.8 -3.2056 | ATTTAGAGTTAGGAA CTGTCTCGGTATTAAGATCT CCA AAATCTTAATACCTAGACAG TCGGATCCGAGTGAT TERM 456 462704 - 462724 + F 100 -15.5 -6.60239 | opp_overlap 462709 CCATAAGTTTTTTTA CGCAAGGTG TTT CACCTTGCG TTTTTTTTTGTTTTT TERM 457 463272 - 463289 + G 71 -2 -5.11063 | gap 1, opp_overlap 463265, overlap 463275 AAGGGAAACCGTATT TCACCTG AAATG CAGG-GA TTTTTCTTAGATGCT TERM 458 464325 - 464347 + G 76 -7.6 -4.15066 | opp_overlap 464325, overlap 464321 CTCGAAGCTCATAAA GGTCCTGGAG GTC CTCCAGATCC TTTGATTTATCAGTA TERM 459 464347 - 464325 - g 86 -9.8 -3.92522 | opp_overlap 464325 464321 CTCGAAGCTCATAAA GGTCCTGGAG GTC CTCCAGATCC TTTGATTTATCAGTA CP0426 462846 - 464585 + | hypothetical protein TERM 460 464710 - 464699 - g 79 -3 -5.31275 | opp_overlap 464699 CTTTAGTAGAAAAAA TTTC TGAG GAAA TTGCTACGAATGAAG TERM 461 464827 - 464811 - g 72 -6.5 -4.38712 | opp_overlap 464811 GCTACTCGGACAAAA GCAAGCC AAG GTCTTGC TTTCTCAGTTGCGTC CP0427 464608 - 465084 + | hypothetical protein CP0428 466195 - 465134 - | phospholipase D family protein TERM 462 465873 - 465895 + g 70 -3.6 -4.77438 | ACATTGCTGGCTTGC TTTAAGATTT GGG GAATTTTAAA TTTTTGATAGTAGAT TERM 463 466262 - 466248 - R 78 -2.2 -5.61881 | overlap 466252 TTTTAAAAATAAAAA TAACTA ATT TAATTA AACGTTTAATAGAAT CP0429 468042 - 466288 - | hypothetical protein TERM 464 467247 - 467273 + g 81 -12.2 -2.53382 | overlap 467245 CTTCAGGACGACGTT TCCCGGCCGGAG ATT CTCCGACCAGGA TGAATTCCGCATCGT TERM 465 467340 - 467328 - G 78 -9.1 -3.85698 | overlap 467331 TTGTTTTTTTATAAA GGAGC TTC GCTCC TTGGAGGAAGGTAGC rpmB 468338 - 468069 - | 50S ribosomal protein L28 TERM 466 468552 - 468571 + r 77 -9.4 -3.26722 | overlap 468550 AATGTTTTATTGCTA TCCTTACA GTCC TGTAAGGA TCTTCTCAATGTAAC CP0431 470135 - 468555 - | 4-alpha-glucanotransferase CP0432 470575 - 470132 - | type III secretion chaperone CP0433 471791 - 470592 - | type III secreted protein SctW TERM 467 471526 - 471539 + g 75 -2.4 -5.25803 | GTGTCAGGCTTCTCT TCTG TAGATT CAGA TTTTTTCTCAGCCTT TERM 468 471700 - 471725 + g 100 -13.3 -3.31144 | opp_overlap 471695, overlap 471700 CTGGCTACAACTTCT GCTGCATCTGC TTTT GCAGCTGCAGC TTCTACAGCTGCAAG CP0434 473952 - 471820 - | type III secretion inner membrane protein SctV TERM 469 472734 - 472704 - G 71 -9 -3.36273 | opp_overlap 472714 CTGTGCGAACATGAA TGCCAGGGTATCGG ATT CCGATATCCTGATA GAGAGCTTGCCGCAT CP0435 475034 - 473952 - | type III secretion system protein TERM 470 474781 - 474749 - G 73 -8.4 -3.66732 | opp_overlap 474751 CAATGACGCCAACAA CAGCAACAGCTCCC AGTAA GGGAAGTGATGCTG TTAAAATAAGCATAA CP0436 475425 - 476519 + | translation-associated GTPase CP0437 477423 - 476497 - | bifunctional riboflavin kinase/FMN adenylyltransferase truB 478108 - 477401 - | tRNA pseudouridine synthase B rbfA 478579 - 478154 - | ribosome-binding factor A infB 481202 - 478530 - | translation initiation factor IF-2 TERM 471 480219 - 480235 + gr 71 -6.6 -4.19177 | CTTTTGAATGACTTC TGAAGC CTTGA GCTTCA TTTCTGTTGCCAGAT TERM 472 480554 - 480565 + gr 74 -5.8 -4.52589 | CACCTTCAGATGTTC CAGG TTTC CCTG TTTTATCTGAAGCAA TERM 473 481052 - 481064 + gr 71 -4.1 -4.82901 | opp_overlap 481063, overlap 481050 481063 CTTTTACAGACTTTT CTTTC GCA GAAGG TTTTTCTGAAGAAGA TERM 474 481096 - 481109 + gr 78 -2.3 -5.49568 | opp_overlap 481063 481096, overlap 481063 TTAGCTTCAGAAGAT CCTGC TTGG GCAAG TTTTTGTTTTAGCTT nusA 482463 - 481159 - | transcription elongation factor NusA TERM 475 481637 - 481649 + gr 76 -6.3 -4.51097 | opp_overlap 481637 GAGACGGGGGAGTAA TTGAC AAT GTCAA TTTTCTCATCGTTCA TERM 476 482135 - 482148 + gr 72 -8.1 -3.39556 | overlap 482134 CCGATAATTTGTCGT GCTGC GTGA GCAGC TATTCTTCCAAAATT TERM 477 482541 - 482509 - R 86 -10.2 -3.5754 | gap 1, opp_overlap 482507 482511, overlap 482505 482512 AAATAGCTAAATTAA GGA-CGTATTATTTA GAAC TAAATAATACGATCC TCTGCATTACCAGCA TERM 478 482537 - 482512 - R 81 -10.7 -2.90283 | opp_overlap 482511 482507, overlap 482509 482505 TAGCTAAATTAAGGA CGTATTATTTA GAAC TAAATAATACG ATCCTCTGCATTACC rpsA 484306 - 482564 - | 30S ribosomal protein S1 CP0443 484893 - 484750 - | hypothetical protein TERM 479 485376 - 485362 - g 77 -8.6 -3.91072 | CTAAACGTTTAGAAA TTCCTG GAG CAGGAA ACGATGAATTTTGGC CP0444 484998 - 485933 + | thioredoxin reductase acpS 486293 - 485925 - | 4'-phosphopantetheinyl transferase CP0446 486759 - 486304 - | hypothetical protein TERM 480 487010 - 487045 + G 76 -2.6 -5.40625 | gap 1, opp_overlap 487020, overlap 487011 487038 AAAGATCATTTAAGT TTTTCCAAAAGCCA-GC TAC GCGTGGCTTTAGAAAAC TTTTTTATATACTCT CP0447 486833 - 487711 + | prolipoprotein diacylglyceryl transferase TERM 481 488960 - 488942 - g 85 -9.6 -4.10179 | CAGAAGGTATACAAA CTTCCAGA GAA TCCGGAAG AAAAGCCCTATGTTT TERM 482 489854 - 489865 + G 70 -5.8 -4.258 | TCATCATTCTTATTA CGAG GAGC CTCG TTTATTCCTGGGTGG CP0448 487850 - 490237 + | putative inner membrane protein translocase component YidC TERM 483 490422 - 490436 + G 73 -7.2 -4.21933 | TGCTTGTAATTTGTA TCTTGA AGC TCAAGA TTCTTTTCAAATTAC TERM 484 491614 - 491592 - g 95 -7.8 -5.0095 | opp_overlap 491594 AAAAATAGAAGAAAA TAGCCATG ATATTCA CATGGCTA TTCAAGATATTTCTA dnaA 490309 - 491691 + | chromosomal replication initiation protein TERM 485 491688 - 491710 + T 83 -6.4 -4.93365 | CGAAGAGATGATTAT TTAGAGGA GTAACGA TCCTCTAA TTTTTGCTTCTGGAC CP0450 492049 - 491684 - | hypothetical protein TERM 486 492206 - 492187 - H 70 -8 -3.32844 | opp_overlap 492186 TTCTCTAGTTCAGAA CTATTAAG CTCT CTTAATAG GCTCTCTTTTATTTA TERM 487 493355 - 493370 + G 70 -7.6 -3.7108 | GGATAAGGCTTGGGA GATGAC TACA GTCATC TTTAACTATACCAAT CP0451 492297 - 494771 + | glycogen phosphorylase TERM 488 494835 - 494790 - T 74 -9.1 -3.12874 | opp_overlap 494794, overlap 494782 494793 ATAGACAGGATGGAA TCAGGGACTCTTTCCATAGCC AAGG AGCTATAGAAAGAGTCCTTTT TGTTCAAAGATTGCT TERM 489 494832 - 494793 - T 100 -15.2 -2.7674 | opp_overlap 494794, overlap 494782 494790 GACAGGATGGAATCA GGGACTCTTTCCATAGCC AAGG AGCTATAGAAAGAGTCCT TTTTGTTCAAAGATT TERM 490 494794 - 494831 + T 100 -15.8 -5.06816 | opp_overlap 494782 494793 494790 ACAGGATGGAATCAG GGACTCTTTCCATAGC CAAGGA GCTATAGAAAGAGTCC TTTTTGTTCAAAGAT CP0452 496138 - 494849 - | branched-chain alpha-keto acid dehydrogenase subunit E2 CP0453 497129 - 496143 - | pyruvate dehydrogenase, E1 component, beta subunit TERM 491 496569 - 496580 + g 75 -7.2 -4.35874 | GAGATATTCTTCGGT GGGG ACTT CCCC TTTTAAGTTATATTC CP0454 498150 - 497122 - | pyruvate dehydrogenase, E1 component, alpha subunit TERM 492 497665 - 497677 + g 100 -6.3 -5.95946 | opp_overlap 497665 ATCTCCGATAAAGCA TAGAG AAA CTCTA TTTTTTTGTTCTTGA TERM 493 498560 - 498542 - g 85 -2.4 -5.82316 | overlap 498543 ACTACTTAAAAAAAA CTCAATGG TTG CCATTCAA AAATGAAGAGTTGGA TERM 494 498615 - 498641 + G 71 -9 -3.30771 | GTTAACTTCGATGGA TAAAAAAATAGC TCA GTTATTTTTTTA TTCTCCCGGATGTAG TERM 495 499335 - 499314 - g 89 -6.7 -5.29846 | AATTTTAAATAAAAA TATCATGAA AATT CTCATGATA AAAAGAAGAGTACGT CP0455 498325 - 499365 + | hypothetical protein lpxD 500496 - 499414 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 496 500316 - 500329 + g 86 -6.7 -5.0133 | opp_overlap 500316 500315 TAGATAAAATAATAG CACCA GCTT TGGTG TTTTTTAGAAAGCTA CP0457 501033 - 500518 - | cationic outer membrane protein OmpH, putative CP0458 503506 - 501128 - | outer membrane protein, putative recR 504467 - 503865 - | recombination protein RecR CP0460 504562 - 505569 + | 3-oxoacyl-(acyl carrier protein) synthase III CP0461 505586 - 506512 + | acyl-carrier-protein S-malonyltransferase TERM 497 506555 - 506545 - g 78 -4 -5.1101 | TTAGTAGGCAAAAAA GTTA TAG TAAC TGGAGGATCTCGAGG fabG 506518 - 507264 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 507420 - 507659 + | acyl carrier protein CP0464 508191 - 507778 - | cyclic nucleotide-binding protein TERM 498 507927 - 507944 + g 70 -7.1 -3.83026 | CATTGTATTCCCTGG GCTTATT ATTG AATAAGC TTTCCTCTCCAAAAC TERM 499 507978 - 507993 + g 81 -4 -5.27938 | overlap 507979 CTAAAGGTTTTAAAT TTAGAG GAGA CTCTAG TTTTTCTTTAGAGAT CP0465 511334 - 508557 - | hypothetical protein CP0466 512055 - 511444 - | hypothetical protein CP0467 512616 - 512086 - | inclusion membrane protein B TERM 500 512715 - 512746 + r 75 -9.6 -2.59526 | overlap 512718 CTTTCCAAAATGCTG TGATTCTACCCTGA ATAT TCAGAGTAGAATTA TCGATTGGATTTATA TERM 501 512718 - 512743 + r 79 -9.1 -3.43965 | overlap 512715 TCCAAAATGCTGTGA TTCTACCCTGA ATAT TCAGAGTAGAA TTATCGATTGGATTT CP0468 514241 - 512757 - | sodium-dependent transporter, putative CP0469 515471 - 514284 - | sodium:dicarboxylate symporter family protein TERM 502 514968 - 514979 + g 71 -3 -5.06414 | AAAAAATTGATTTAC GAAA TGTT TTTC TTTTTCTTGAAGAAA TERM 503 515387 - 515372 - G 79 -7.6 -4.30987 | ATTCGGCAGAATAAA CAATCC ATGG GGATTG CACACTTCCTAAACC TERM 504 516027 - 516016 - g 70 -5.8 -4.30034 | opp_overlap 516016 516022 AAAATTCGATGAAAA GCAC GTGA GTGC TTGCTCTTATCTAGA CP0470 515567 - 516715 + | hypothetical protein TERM 505 516935 - 516987 + F 73 -3.8 -5.14163 | gap 1, overlap 516938 TAAGAAATAGATGTT CTTGTTTTTGAAAAG-ATTAAAAGA AGGT TTTTAGAATTCTTTTCAAAAACTAG TTTTTATTAGTGGGT CP0471 517062 - 519197 + | hypothetical protein TERM 506 519461 - 519473 + G 74 -4.8 -4.77759 | AATACAGATTCTGCT TCGC GGTGG GCGA TTTTTCGTAGGTTGT TERM 507 520488 - 520504 + G 76 -2.9 -5.33405 | overlap 520490 520490 TCACAGCTACGACTC TAGGGGT TTT ATCCCCA TTTTTCTTTGCTAAG CP0472 519224 - 520636 + | magnesium transporter TERM 508 521604 - 521592 - g 75 -3.4 -5.09225 | AGTGTATTGAAAAAA TCGT TGCAT ACGA CCCTAATCTTCTTAC CP0473 520688 - 522235 + | hypothetical protein CP0474 522238 - 522735 + | hypothetical protein TERM 509 522971 - 522953 - T 71 -7.4 -3.69469 | opp_overlap 522953, overlap 522954 AGATCCGAAGAAACA CTCGACCC TTG GGATCGAA ATTTCCAGTGAAACA TERM 510 523683 - 523719 + T 83 -5.8 -5.04377 | opp_overlap 523683 523686, overlap 523711 GCAAATTTGAATCCA GAAGCTTTCCAGGCTG CCATA CAACAAGGAAGGCTTC TTTCTTTTCTTTTCC TERM 511 523711 - 523723 + T 76 -4.1 -5.07652 | opp_overlap 523686 523683, overlap 523683 CTGCCATACAACAAG GAAGG CTT CTTTC TTTTCTTTTCCCAAA CP0476 525157 - 523751 - | amino acid antiporter TERM 512 524633 - 524617 - G 73 -5.9 -4.46072 | overlap 524619 CCCAAGAAAGAGAAA TAGCAAT GGG ATTGCCA GAAAAAATCCAAAAG TERM 513 525124 - 525139 + g 83 -9 -4.18494 | CGACCGTGAATGTTC CCAACG GTTT CGTTGG TTTTGAGTGGGAGTG CP0477 526226 - 525177 - | fructose-bisphosphate aldolase TERM 514 526650 - 526664 + H 78 -7.2 -4.3821 | AGTTTAATGGTTAAC GAATCT TCA AGATTC TTTGTATTCTATTTT TERM 515 526853 - 526868 + G 78 -9 -3.76534 | opp_overlap 526853, overlap 526846 GCGGTTCTGGGAAAA CAACGC TTTT GCGTTG TTTAGACTTTCTTGA TERM 516 526868 - 526853 - g 80 -9 -4.07568 | opp_overlap 526846 526853 GCGGTTCTGGGAAAA CAACGC TTTT GCGTTG TTTAGACTTTCTTGA TERM 517 527621 - 527647 + G 73 -7.5 -4.20868 | gap 1, opp_overlap 527629 GCAACATTAATTTAT TTAGAAAATCCC CAAT GGGATT-TCTAA TTATTGTTTTGGAAG TERM 518 527640 - 527629 - g 73 -5.8 -4.43501 | opp_overlap 527621 AATTTATTTAGAAAA TCCC CAAT GGGA TTTCTAATTATTGTT CP0478 526711 - 527736 + | ABC transporter, ATP-binding protein TERM 519 528040 - 528050 + G 71 -3.2 -4.93661 | GTTCCTCTCACTATC GGAG CCA TTCC TTTTGTTGTTACTAT CP0479 527746 - 528411 + | ABC transporter, permease protein CP0480 528408 - 529226 + | putative lipoprotein CP0481 529373 - 529882 + | hypothetical protein CP0482 529898 - 530047 + | hypothetical protein CP0483 530146 - 530493 + | hypothetical protein TERM 520 531588 - 531612 + G 73 -3.5 -5.00884 | CTCAGTGGCTCAACA GGTTGTAGGGG AAG CTCTGACAATC TTTTTTGAAGAGAAT gyrB 530497 - 532914 + | DNA gyrase subunit B TERM 521 533546 - 533529 - g 78 -9.9 -3.53012 | opp_overlap 533525 533524 TCTTCTGCTTGCAAA TCCACAG GCTT CTGTGGA TGAGATTTTACAAGT CP0485 532930 - 535434 + | DNA gyrase subunit A tdk 535439 - 536059 + | thymidylate kinase TERM 522 536391 - 536403 + G 71 -4.8 -4.62302 | TCGAATGACTTTAGC TGCG ATTTC CGCA TTTTTAAAAGTCTTC TERM 523 536460 - 536436 - g 95 -12.3 -3.36837 | overlap 536434 536425 AGAACCTCCGAAACA TGCTGTTATCA TAT TGACAACAGCA AAAGTTCAGAGATTG CP0487 536050 - 536946 + | DNA polymerase III subunit delta' CP0488 537649 - 536918 - | serine esterase, putative CP0489 537958 - 538818 + | Sua5/YciO/YrdC family protein CP0490 538833 - 539810 + | dipeptidase, putative CP0491 539956 - 539816 - | hypothetical protein TERM 524 539936 - 539958 + g 78 -5.5 -4.95155 | opp_overlap 539936 TAACACAGTATTAAA CAGGGCGGA ACTCA TTCGCACTG TTTTTATCCTATAAG CP0492 540348 - 539962 - | hypothetical protein CP0493 541161 - 540370 - | hypothetical protein CP0494 541362 - 541264 - | hypothetical protein TERM 525 541335 - 541380 + g 82 -2 -5.64873 | overlap 541337 TTTTTATAGTTTTAA GAGTTTTATAGTGAGTAAGT TTTCTC ATTTACCTACTTTAAAACCC TTTTTTGTTCTTAAA CP0495 542099 - 541404 - | hypothetical protein TERM 526 542575 - 542548 - H 88 -7.8 -4.89852 | gap 1, opp_overlap 542554, overlap 542550 542551 GTAGAGGCATAAAAA GACGAACCCCCTA ACA TAGGGGGTTC-TA AAAAGATTGGGGGGA TERM 527 542574 - 542550 - H 100 -12.9 -4.06785 | opp_overlap 542554, overlap 542548 542551 AGAGGCATAAAAAGA CGAACCCCCTA ACA TAGGGGGTTCT AAAAAGATTGGGGGG TERM 528 542573 - 542551 - H 100 -16.4 -3.02986 | opp_overlap 542554, overlap 542550 542548 GAGGCATAAAAAGAC GAACCCCCTA ACA TAGGGGGTTC TAAAAAGATTGGGGG TERM 529 542554 - 542570 + H 91 -12.3 -3.30159 | opp_overlap 542551 542550 542548 GCATAAAAAGACGAA CCCCCTA ACA TAGGGGG TTCTAAAAAGATTGG TERM 530 542701 - 542720 + G 82 -2.2 -5.61596 | opp_overlap 542709, overlap 542709 TTTAGTTAATTTTAA GTATTCAA TATT TTCAATAC TTTTTTTATCAGCAT TERM 531 543327 - 543350 + G 75 -3.2 -5.15117 | opp_overlap 543325, overlap 543325 TTGCAAAAGTAAACT TATGGGTAAG TTAT CTTGCTTATA TTTTTTCAGGTTTTG ubiA 542663 - 543556 + | prenyltransferase CP0497 543553 - 544131 + | aromatic acid decarboxylase CP0498 545034 - 544144 - | hypothetical protein TERM 532 545089 - 545105 + r 75 -10.1 -2.62933 | TCGAACCCGCAACTT CCGCCTT GAC AGGGCGG TGCTCTAACCAATTG TERM 533 545323 - 545299 - R 79 -8 -4.0031 | opp_overlap 545301, overlap 545321 ATCTCGATTAAACAA GAGATCTTTT GTAAA AAAAGACCTC TGATACCAAAGACTA surE 546192 - 545347 - | stationary phase survival protein SurE CP0500 546981 - 546247 - | hypothetical protein TERM 534 547135 - 547181 + H 77 -4.7 -5.10163 | gap 1, opp_overlap 547154 TAACGAGTACTAGGT TCCAAGGTTAAA-GAAAAAAGC AATA GGTTTTTGCATTTGACTTTGGA TTTTATTTTGAGCTT TERM 535 547168 - 547154 - H 80 -2.8 -5.64421 | opp_overlap 547135 AGGTTAAAGAAAAAA GCAATA GGT TTTTGC ATTTGACTTTGGATT TERM 536 547530 - 547517 - g 75 -3.1 -5.2189 | GTAATGAGTAAAAAA GCTCT TAAG AAAGC TCAGGCAAAAGAAGA CP0501 547223 - 547738 + | hypothetical protein TERM 537 547730 - 547718 - T 72 -4.8 -4.66264 | GAAAACTCTCAAAAA CCTC CAGTT GAGG AAGATTAATTTCAGA CP0502 548039 - 547932 - | hypothetical protein CP0504 549156 - 550019 + | hypothetical protein TERM 538 550234 - 550223 - g 75 -3 -5.1523 | CTTACAATACAAAAA GATA TAAA TATC AGACCTACAAGCACC CP0505 550019 - 550888 + | hypothetical protein TERM 539 550939 - 550889 - f 100 -14.2 -3.63515 | opp_overlap 550892, overlap 550892 CCTTACGTTGAATAA TCATCGAACTCCAAGTATTGTTAG AAA CTAACGATGCTTGGAGTTCGATTT CCTTATATCACTTGG TERM 540 550892 - 550936 + F 100 -24.7 -4.04576 | opp_overlap 550889 550892 TACGTTGAATAATCA TCGAACTCCAAGTATTGTTAG AAA CTAACGATGCTTGGAGTTCGA TTTCCTTATATCACT TERM 541 550936 - 550892 - f 100 -20.3 -2.93549 | opp_overlap 550892, overlap 550889 TACGTTGAATAATCA TCGAACTCCAAGTATTGTTAG AAA CTAACGATGCTTGGAGTTCGA TTTCCTTATATCACT TERM 542 551429 - 551446 + G 78 -2 -5.47159 | overlap 551422 551431 GGTGCCAGCGAATTA TGTTCG TTCTCC CGAATA TTTTTTCTGTTCCAA CP0506 551118 - 551957 + | hypothetical protein CP0507 552021 - 552827 + | hypothetical protein TERM 543 553711 - 553759 + TF 86 -6.2 -5.40072 | gap 2, opp_overlap 553711 553714 553716, overlap 553712 553721 CCTTTTGTTAACTAA CCACAGGACCCTAAGCTTTGCTAG TTT TTAGCAAAGCTT-GG-TTCTGAGA TTTTTTTACAACACG TERM 544 553712 - 553758 + TF 83 -9.7 -3.83561 | gap 2, opp_overlap 553711 553714 553716, overlap 553711 553721 CTTTTGTTAACTAAC CACAGGACCCTAAGCTTTGCTAG TTT TTAGCAAAGCTT-GG-TTCTGAG ATTTTTTTACAACAC TERM 545 553721 - 553751 + TF 100 -14.2 -3.47063 | opp_overlap 553716 553714 553711, overlap 553712 553711 ACTAACCACAGGACC CTAAGCTTTGCTAG TTT TTAGCAAAGCTTGG TTCTGAGATTTTTTT CP0510 555232 - 553721 - | hypothetical protein TERM 546 554234 - 554250 + gF 70 -7.3 -3.76224 | opp_overlap 554243 CTTGGCACGTAATTT TTCTAGG AAT CCTAGGA TTTGCTCCCTAGAAG TERM 547 554815 - 554799 - Gf 74 -9.5 -3.10641 | opp_overlap 554797 GAACCTAGTAGGTAA TGGATGT GTG ACATCCA GGGTTTAAGCTCATC TERM 548 555188 - 555204 + gF 71 -4.5 -4.63218 | opp_overlap 555188 AAAAGAAATATAGCA TAGTAAG CGA TTTACTA TTTTCTTAAAAGGAC rpmG 555226 - 555384 + | 50S ribosomal protein L33 TERM 549 556425 - 556412 - g 77 -3.9 -5.20328 | TTGTAAAAAAACAAA TAGAA AATA TTCTA ACTTCCTTAGGTGTC TERM 550 556760 - 556743 - g 85 -5.7 -5.2422 | AATTACATTAAAAAA TTTACAA TTCA TTGTAAA AGCACTGAACTATTT CP0512 555442 - 556953 + | hypothetical protein TERM 551 557418 - 557406 - g 73 -5.5 -4.63527 | opp_overlap 557406 557414 TCAGGAGGGGAAAAA CAGCG AGT CGCTA TTGCTAGAGCGTTAA CP0513 556956 - 557636 + | ABC transporter, ATP-binding protein CP0514 557675 - 557824 + | hypothetical protein TERM 552 558296 - 558280 - g 72 -8.1 -3.84825 | overlap 558265 GGGATTCATACGAAA CTTTTGA ATC TCAAAAG CCAATTTTATTAGAT rplM 557868 - 558317 + | 50S ribosomal protein L13 TERM 553 558714 - 558703 - g 75 -2.2 -5.38047 | TACGGACATAAAAAA GCTC GTAA AAGC TTCCAATTCTCTAAG rpsI 558331 - 558735 + | 30S ribosomal protein S9 TERM 554 558766 - 558797 + T 95 -8.9 -4.84359 | opp_overlap 558771 558786, overlap 558758 558771 TCGAATCGTTTTTGG AAAAAGCCTTTCT TATTAC AGAAAGGCTTTTC TTTTTCTAGGGATCC TERM 555 558771 - 558792 + T 95 -8.8 -5.35224 | opp_overlap 558771 558786, overlap 558758 558766 TCGTTTTTGGAAAAA GCCTTTCT TATTAC AGAAAGGC TTTTCTTTTTCTAGG TERM 556 558792 - 558771 - T 89 -8.8 -4.56597 | opp_overlap 558758 558771 558766, overlap 558786 TCGTTTTTGGAAAAA GCCTTTCT TATTAC AGAAAGGC TTTTCTTTTTCTAGG CP0517 559638 - 558781 - | NLP/P60 family protein adk 560365 - 559724 - | adenylate kinase TERM 557 560665 - 560706 + H 78 -7.7 -4.15044 | ATATAACTTTATTTT TTTTAATAAATAAACTATA ATTA TTTAGTTTTTTTATTAAAA TTTGTTAAAGGGAGG CP0519 560728 - 561153 + | hypothetical protein TERM 558 561164 - 561194 + F 100 -12.8 -5.1244 | opp_overlap 561164 561166 GGTAATAACTATAGA TAGGGGTTTTTCTA AGC TAGAAAGACCTCTA TTTTTATATTCATGG CP0520 561365 - 561799 + | hypothetical protein TERM 559 562213 - 562203 - g 70 -2.6 -5.0133 | GATTTTTTGAAAAAA TATT TGG AATA GGGTGTTGTCCCCTG CP0521 561929 - 563083 + | hypothetical protein CP0522 563422 - 564588 + | hypothetical protein CP0523 565408 - 564608 - | 6-phosphogluconolactonase TERM 560 564716 - 564730 + g 90 -7.2 -5.24796 | GTCCCTACCTACACG CTCTAT AGG ATAGAG TTTTTCTTCTCTACC TERM 561 564951 - 564928 - G 71 -3.2 -5.05782 | gap 1, opp_overlap 564935 AGGTATTGGAAAAAA GAGAA-AGGGT GTG ACCATCTTCTC CTAGTCCTAACATAA CP0524 566980 - 565442 - | glucose-6-phosphate 1-dehydrogenase TERM 562 565588 - 565576 - G 91 -7.7 -4.79826 | ATACAGGAGTAAAAA GCTTC CAA GAAGC CATAACTTCATCTCC TERM 563 566467 - 566525 + g 74 -7.7 -4.02911 | gap 1, opp_overlap 566484, overlap 566483 566487 AGTCTCTTCCAAAAG GTTTTTCTATAATGACACGGGACCAGGG TTTC CCTTGGTCTTGATTT-TTATAGAAAAGC TTATGTTTATTTAAA TERM 564 566483 - 566510 + g 80 -6.2 -4.82901 | opp_overlap 566484, overlap 566467 566487 TTTTTCTATAATGAC ACGGGACCAGGG TTTC CCTTGGTCTTGA TTTTTATAGAAAAGC TERM 565 566487 - 566506 + g 84 -10 -3.88001 | opp_overlap 566484, overlap 566483 566467 TCTATAATGACACGG GACCAGGG TTTC CCTTGGTC TTGATTTTTATAGAA TERM 566 567077 - 567103 + r 73 -8.2 -3.68936 | ATGATTACAAGGTTA GTTTTTTAGGTA AGC TATCTAGAAAAC TTGTTAAGATTAATG CP0525 567530 - 567066 - | Holliday junction resolvase-like protein TERM 567 567126 - 567136 + g 71 -3.2 -4.99134 | GATTAATGTTGCAGC CAGG GAA TCTG TTTTTCCTTTCCGAT TERM 568 567214 - 567229 + g 72 -7.6 -3.89346 | overlap 567228 ACTGAAGAAAGCCGT TCATCC CATA GGATGA TTTCTACCGTAGAAA CP0526 569127 - 567514 - | CTP synthetase TERM 569 569099 - 569084 - G 73 -9 -3.53343 | opp_overlap 569083 569086 AACCCTTTTCCTAAA GAGGAG ACAA CTCCTC CTGTTAAAAATATGC CP0527 569867 - 569103 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 570 569725 - 569752 + g 73 -7.2 -4.22041 | gap 1, opp_overlap 569725 ATTTTATCTAATAGA GAACTT-TGGGAA GCA TTCTCATAAGTTC TTTGTATTAAGCTTT CP0528 569893 - 570015 + | hypothetical protein CP0529 570043 - 570738 + | hypothetical protein TERM 571 570790 - 570770 - f 90 -11.2 -3.61398 | opp_overlap 570770 TTTGTGTTTTAAGAA CCATTGCC GGGTT GGCAATGG TTTTTTTATTTATAT TERM 572 570770 - 570790 + F 100 -11.9 -6.04953 | opp_overlap 570770 TTTGTGTTTTAAGAA CCATTGCCG GGT TGGCAATGG TTTTTTTATTTATAT CP0530 570773 - 570892 + | hypothetical protein CP0531 570859 - 571038 + | hypothetical protein TERM 573 571796 - 571813 + G 73 -9.9 -3.05194 | overlap 571795 571810 TGCTACAGGCGAGTC TTTCGCG ATGT CGCGAAA CTATTTTCTTTCCTT TERM 574 571886 - 571909 + G 77 -8.2 -3.98913 | CGGCGCTGTTTCTCA GGTATGCTAT GAAT ATAGCATTCC TTGTTTAGGTGTGAA CP0532 571161 - 572054 + | hypothetical protein TERM 575 572566 - 572554 - g 91 -7.7 -4.76041 | TATATGCAGCAAAAA GAAGC CCT GCTTC CTTGGCGTACGGCTT CP0533 572326 - 573033 + | ABC transporter, ATP-binding protein TERM 576 573644 - 573632 - g 74 -4.8 -4.84539 | GAACCAAAGAGAAAA GCGT GACGA ACGC GAAGCTAAGAAAGAA CP0534 573177 - 573710 + | hypothetical protein CP0535 574955 - 573720 - | hypothetical protein CP0536 575173 - 575874 + | hypothetical protein CP0537 575867 - 576277 + | putative disulfide oxidoreductase CP0538 576717 - 576313 - | hypothetical protein TERM 577 576680 - 576698 + g 80 -10.3 -3.43109 | overlap 576678 CATAGACTTTGAGTT CCCTGGA TGAAC TCCAGGG TGTTTGCATAGTATG CP0539 577410 - 576739 - | hypothetical protein TERM 578 576932 - 576954 + g 75 -8.4 -3.84284 | opp_overlap 576918 576935 576938, overlap 576935 ACAGCTTGTTTAATT GAAGAAGCTG CTT CGGCTCCTTC TTTCATAACTTTTGC TERM 579 577168 - 577154 - G 82 -8.6 -4.33621 | opp_overlap 577154 577156 CATCTAAGTAATAAA CATAGG AAA CCTATG TTGGCTAAAGCAATT CP0540 577627 - 577457 - | hypothetical protein CP0541 577848 - 577606 - | hypothetical protein TERM 580 577915 - 577940 + r 71 -6.3 -4.16033 | gap 1, opp_overlap 577911 577915 577922, overlap 577919 577922 CTAAAAAGATACAAT TTAATT-ACGCC GTA GGCGTGGATTAA TTGTTGTTATTTGCA CP0542 578327 - 577947 - | hypothetical protein CP0543 578779 - 578438 - | hypothetical protein CP0544 579626 - 579216 - | hypothetical protein TERM 581 579943 - 579895 - R 100 -14.8 -3.78934 | CGTCTTTTATAATAA TAGCAGCTACTAAGAGAAGTGG GGATT CCTTTTTTCTTAGTAGCTGCTA CGTATAGGTACTTCG CP0545 580587 - 580042 - | hypothetical protein TERM 582 580506 - 580523 + g 83 -9.1 -4.07868 | GAAGTTTATATGCCA CGCCTTC TTTC GAGGGCG TTTCTCTGAATATCG TERM 583 580664 - 580684 + r 95 -2.7 -6.22691 | opp_overlap 580664, overlap 580668 AATCCGATAAATTAA TTATTTTTT AAT AAAAATTAA TTTTTTTTATTCTTA CP0546 581926 - 580808 - | queuine tRNA-ribosyltransferase TERM 584 581201 - 581177 - G 86 -10.1 -4.03234 | opp_overlap 581197, overlap 581197 TTCTTTTGATAGAAA TGAAGTGGTGA TTT TAACCACTTCA GACATTTCTTGAAGG TERM 585 581260 - 581244 - G 76 -10.9 -2.62184 | overlap 581246 CTGCCTCCGATAGCA GAGCCAT CGA ATGGCTC ATCCTCAACAAAACG TERM 586 582148 - 582175 + G 77 -3.6 -5.13722 | overlap 582170 TATTGGGGATATTTT GTTTTAAGAAAA TTAA TCTTTTTAAAAC TTTTATTTTAATGAA CP0547 582135 - 582704 + | hypothetical protein CP0548 583369 - 582701 - | hypothetical protein CP0549 583674 - 584111 + | hypothetical protein TERM 587 585347 - 585324 - g 75 -8.3 -3.75332 | opp_overlap 585324 AGTTTTTAACTCAAA CTTTCTCTT CGGAAC AAGAGAAAG TCTTAGAGGAGTATG CP0550 584267 - 585526 + | hypothetical protein CP0551 585625 - 586839 + | hypothetical protein CP0552 586940 - 587071 + | hypothetical protein TERM 588 587476 - 587503 + G 79 -11.4 -2.52896 | opp_overlap 587475 587498 TAATAAGTATAGGAT TGGCGCTTCTTA AATT TAAGGAGCGCTA TGGATTAGAGCCTAA TERM 589 587774 - 587762 - g 74 -6.3 -4.43012 | AGCCCAAGAGCAAAA CTCTA TTT TAGAG CAGTGTAAAGAGGCA CP0553 587223 - 588404 + | hypothetical protein CP0554 588533 - 588829 + | hypothetical protein TERM 590 589099 - 589070 - g 78 -10.3 -3.38072 | gap 1 GCTACGGAAGATGAA GATGTGCTTTTTGA GTC TCAAAAAGCA-ATC GATGCGTGGAATGCT TERM 591 589724 - 589703 - g 74 -4.5 -4.77719 | GAAAAGGGAATAAAA CAAACTAAA GAGC TTGAGTTTG CAATTGCTAAAAGTA CP0555 588905 - 589852 + | hypothetical protein CP0557 590259 - 590014 - | hypothetical protein CP0558 590475 - 590350 - | hypothetical protein CP0559 592336 - 590684 - | diphosphate--fructose-6-phosphate 1-phosphotransferase TERM 592 590887 - 590899 + g 80 -2.7 -5.46698 | ATGCCGTGCTTCCTA TATCT ACG AGGTA TTTTTTAATTTTAGG TERM 593 591570 - 591594 + g 70 -9.3 -2.8478 | opp_overlap 591571, overlap 591569 591573 GCACATTCCAAAGCA ATATGGGATGC TGA GCGTCCCATAA GTTTAATGAAGTGGT TERM 594 591593 - 591571 - G 80 -10.6 -3.53745 | opp_overlap 591570 591569 591573 CACATTCCAAAGCAA TATGGGATGC TGA GCGTCCCATA AGTTTAATGAAGTGG TERM 595 591573 - 591591 + g 76 -11 -2.67981 | opp_overlap 591571, overlap 591570 591569 CATTCCAAAGCAATA TGGGATGC TGA GCGTCCCA TAAGTTTAATGAAGT TERM 596 592611 - 592574 - R 100 -15.1 -2.80622 | opp_overlap 592574 592578, overlap 592577 592584 AGAGAGCTTATGACA GAAGGCTAAATCACAGG TGGT CCTATGATTTAGCTTTC ATATTTCACAAAATA TERM 597 592574 - 592611 + r 100 -15.1 -2.60813 | opp_overlap 592574 592577 592584, overlap 592578 AGAGAGCTTATGACA GAAGGCTAAATCACAGG TGGT CCTATGATTTAGCTTTC ATATTTCACAAAATA TERM 598 592608 - 592577 - R 89 -11 -3.54951 | opp_overlap 592574 592578, overlap 592574 592584 GAGCTTATGACAGAA GGCTAAATCACAGG TGGT CCTATGATTTAGCT TTCATATTTCACAAA TERM 599 592578 - 592607 + r 100 -12.3 -4.00532 | opp_overlap 592577 592574 592584, overlap 592574 AGCTTATGACAGAAG GCTAAATCACAGG TGGT CCTATGATTTAGC TTTCATATTTCACAA CP0560 594081 - 592669 - | sodium:sulfate symporter family protein TERM 600 593247 - 593237 - G 71 -6.8 -4.1413 | AAGAGATCTCCAAAA GTCC AGA GGAC TACAAGGAGGAAAAA TERM 601 593342 - 593354 + g 80 -6.3 -4.7497 | overlap 593339 593337 GATCGGATAGCCTCT TCACA AGA TGTGA TTTTTGGTGGGTAGA CP0561 594880 - 594125 - | hypothetical protein CP0562 595156 - 594959 - | hypothetical protein CP0563 595472 - 595284 - | hypothetical protein CP0564 596281 - 595484 - | hypothetical protein CP0565 597574 - 596786 - | peptide ABC transporter, ATP-binding protein CP0566 598425 - 597571 - | peptide ABC transporter, ATP-binding protein CP0567 599272 - 598418 - | peptide ABC transporter, permease protein CP0568 600247 - 599303 - | peptide ABC transporter, permease protein CP0569 602126 - 600540 - | peptide ABC transporter, periplasmic peptide-binding protein TERM 602 602410 - 602380 - R 93 -3.3 -6.09888 | gap 1, overlap 602360 CTTCAATAAAAAAAA CCCCT-TACCAAAG ACTT CTTTTGTCTAGGGG AAATAGGTATATTTG CP0570 603711 - 602404 - | peptide ABC transporter, periplasmic peptide-binding protein, putative TERM 603 603701 - 603688 - G 75 -2.3 -5.3321 | AATGAATAATAAAAA GAGGG TGAT CCATC GTGAAAACATTTTAA CP0571 605350 - 603767 - | peptide ABC transporter, periplasmic peptide-binding protein, putative TERM 604 604768 - 604788 + g 76 -10.5 -3.00525 | CACCGCAGGTAATGG GCATCTCTT CAA AAGAGGTGC TATAGTTTCGCAGAG TERM 605 605451 - 605429 - R 73 -6.9 -4.00868 | opp_overlap 605429, overlap 605432 GCAGTCAGAAGGAAA CGAGGTGCC ACAAA GGCACCCAG TTTAGTATAAGATTC TERM 606 605448 - 605432 - R 74 -9.4 -3.04864 | opp_overlap 605429, overlap 605429 GTCAGAAGGAAACGA GGTGCC ACAAA GGCACC CAGTTTAGTATAAGA CP0572 607099 - 605501 - | peptide ABC transporter, periplasmic peptide-binding protein, putative TERM 607 605999 - 606022 + gr 70 -2.6 -5.0538 | gap 1, overlap 606000 AGCGGTGATTTGGAG TTCTTCTAAAG CTT CTTTA-AAGAG TTTTTTAGCGTAAGC CP0573 608079 - 607045 - | O-sialoglycoprotein endopeptidase CP0574 608163 - 608606 + | arginine repressor CP0575 608655 - 609308 + | amino acid ABC transporter, permease protein CP0576 609298 - 609978 + | amino acid ABC transporter, ATP-binding protein TERM 608 609975 - 610010 + T 71 -7.6 -3.62096 | opp_overlap 609978 609981, overlap 609976 609978 TATCCACTCTGCTCA ATAGGACTACAGCTGC TAGA GCAGCTGTAGTGATAC TTTAGAATCCTGACC TERM 609 609976 - 610009 + T 81 -11.1 -2.77043 | opp_overlap 609978 609981, overlap 609975 609978 ATCCACTCTGCTCAA TAGGACTACAGCTGC TAGA GCAGCTGTAGTGATA CTTTAGAATCCTGAC TERM 610 610007 - 609978 - T 74 -9.3 -3.02144 | opp_overlap 609978 609976 609975, overlap 609981 CCACTCTGCTCAATA GGACTACAGCTGC TAGA GCAGCTGTAGTGA TACTTTAGAATCCTG TERM 611 609978 - 610007 + T 73 -9.3 -2.93089 | opp_overlap 609978 609981, overlap 609976 609975 CCACTCTGCTCAATA GGACTACAGCTGC TAGA GCAGCTGTAGTGA TACTTTAGAATCCTG TERM 612 610004 - 609981 - T 100 -15.4 -2.73875 | opp_overlap 609978 609976 609975, overlap 609978 CTCTGCTCAATAGGA CTACAGCTGC TAGA GCAGCTGTAG TGATACTTTAGAATC CP0577 611370 - 610012 - | hypothetical protein TERM 613 610077 - 610092 + g 74 -6.2 -4.48987 | CGACAGGGGAGTTTT CAAACT GATT AGTTTG TTTTAATTGTAGAGA CP0578 614889 - 611461 - | hypothetical protein TERM 614 611878 - 611865 - G 71 -2.4 -5.23292 | GTACAGAAAAGAAAA TTGG AGTGAA CCAA GATTCTACAAATTGC TERM 615 612571 - 612560 - G 74 -4.4 -4.92757 | TCATTAATAATAAAA GTCT CTTT AGAC ACATTATCATAGAAG TERM 616 613018 - 613031 + g 71 -6.7 -4.23434 | CAAAGAAAATATCTC TCCAG AACC CTGGA TTTTCAAGTCTTTTG TERM 617 613335 - 613345 + g 73 -5.4 -4.67608 | CAAATTTTGCATGGA TGAG CAG CTCA TTTTCTCTTGCAGTA TERM 618 613445 - 613467 + g 80 -2.6 -5.46657 | opp_overlap 613445, overlap 613447 613461 613465 TCAGCGTAAGAGAAG TGGGGAGAGA GAA TCTCCTGCCA TTTTTTATTAAAGTG TERM 619 613544 - 613511 - G 79 -3.1 -5.26119 | opp_overlap 613513, overlap 613506 613512 613513 CCTTTAAAAAGAAAA TTTTTCCATGCTCCA GACA TGGAGCATGACAATT TCAATAGCGGGTTAT TERM 620 613513 - 613542 + g 70 -7.9 -3.65199 | opp_overlap 613506 613512 613511 613513 TTTAAAAAGAAAATT TTTCCATGCTCCA GACA TGGAGCATGACAA TTTCAATAGCGGGTT TERM 621 613542 - 613513 - G 72 -10.1 -2.83668 | opp_overlap 613513, overlap 613506 613512 613511 TTTAAAAAGAAAATT TTTCCATGCTCCA GACA TGGAGCATGACAA TTTCAATAGCGGGTT TERM 622 614760 - 614793 + g 86 -12 -3.05268 | gap 1, opp_overlap 614763 614775, overlap 614763 GTCCGGATTCTTTAT GAATCAGGGAAA-AC ACAAG GTATTTCCCTGATTC TGTTGAAAGTAGTTG TERM 623 614763 - 614790 + g 70 -7.9 -3.66784 | gap 1, opp_overlap 614763 614775, overlap 614760 CGGATTCTTTATGAA TCAGGGAAA-AC ACAAG GTATTTCCCTGA TTCTGTTGAAAGTAG CP0579 616178 - 614886 - | hypothetical protein CP0580 617041 - 616241 - | hypothetical protein TERM 624 616285 - 616298 + g 70 -5.3 -4.47551 | opp_overlap 616264, overlap 616270 GGAATAATGGAAATT CCTTT CGAC AAAGG TTTTCTGCCTTAGCT TERM 625 617182 - 617153 - R 100 -15.3 -6.09133 | opp_overlap 617153 CATTTCAAAAAAAAA TAAGCAGTAAAGT TAAA ACTTTACTGCTTA TTTTCTAAGGAAGTC TERM 626 617153 - 617182 + r 100 -15.3 -4.3739 | opp_overlap 617153 CATTTCAAAAAAAAA TAAGCAGTAAAGT TAAA ACTTTACTGCTTA TTTTCTAAGGAAGTC CP0581 618390 - 617218 - | hypothetical protein TERM 627 617499 - 617509 + g 75 -5.4 -4.89838 | GCAAAGATGTTTCAT GTTG GGC CAAC TTTTCTATTTCTTGA CP0582 618552 - 618445 - | hypothetical protein TERM 628 619017 - 619032 + G 77 -6.2 -4.59773 | opp_overlap 619017 CATTGCTGCCATTAA TAGATC TACG GATCTA TTTTTAGAAGTCCAC CP0583 618838 - 619527 + | ribulose-phosphate 3-epimerase TERM 629 619742 - 619754 + G 80 -2.7 -5.58209 | TATTTATATCTTGAA GATGA AAG TTATC TTTTTTTAGATTTAG CP0584 619514 - 620071 + | elongation factor P CP0585 620094 - 620597 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 630 621053 - 621042 - g 78 -4.4 -5.10077 | opp_overlap 621042 AAATAGCTGAAAAAA TAGG TTTC CCTA TTGTTATTAAAGCCG CP0586 620594 - 621958 + | acetyl-CoA carboxylase biotin carboxylase subunit CP0587 622114 - 622515 + | hypothetical protein CP0588 622383 - 622937 + | hypothetical protein CP0589 622886 - 623236 + | hypothetical protein CP0590 623237 - 623503 + | hypothetical protein TERM 631 623533 - 623552 + F 71 -8.6 -2.99593 | gap 1, opp_overlap 623532, overlap 623532 GCACTAACAAAAGTT CTCTCCCGA ATC TCGGG-GAG CTTTCATTATAGACT CP0591 623683 - 623775 + | hypothetical protein CP0592 623830 - 624684 + | hypothetical protein TERM 632 624719 - 624766 + T 85 -9.4 -3.91032 | gap 1, opp_overlap 624726 624729, overlap 624722 624724 624729 GATGAGTTCTCTAGA AAGCAAATAAGACATCCCCTTAA AAC TTAAGGGGATGTCTTAACT-CTA TTTATACAGTAATTA TERM 633 624722 - 624764 + T 91 -12.2 -3.54 | opp_overlap 624726 624729, overlap 624719 624724 624729 GAGTTCTCTAGAAAG CAAATAAGACATCCCCTTAA AAC TTAAGGGGATGTCTTAACTC TATTTATACAGTAAT TERM 634 624724 - 624762 + T 100 -14.8 -3.34244 | opp_overlap 624726 624729, overlap 624722 624719 624729 GTTCTCTAGAAAGCA AATAAGACATCCCCTTAA AAC TTAAGGGGATGTCTTAAC TCTATTTATACAGTA TERM 635 624760 - 624726 - T 100 -21.8 -4.13995 | opp_overlap 624724 624722 624719 624729, overlap 624729 TCTCTAGAAAGCAAA TAAGACATCCCCTTAA AAC TTAAGGGGATGTCTTA ACTCTATTTATACAG TERM 636 624729 - 624757 + T 100 -19.1 -3.22943 | opp_overlap 624726 624729, overlap 624724 624722 624719 CTAGAAAGCAAATAA GACATCCCCTTAA AAC TTAAGGGGATGTC TTAACTCTATTTATA TERM 637 624757 - 624729 - T 100 -19.1 -4.18676 | opp_overlap 624729 624724 624722 624719, overlap 624726 CTAGAAAGCAAATAA GACATCCCCTTAA AAC TTAAGGGGATGTC TTAACTCTATTTATA CP0593 626003 - 624768 - | hypothetical protein TERM 638 624838 - 624819 - G 72 -9.4 -3.23274 | opp_overlap 624816, overlap 624814 TGTCGTACAAGTTAA TGTCTGAT AGCC ATCAGACA TGCTCGTTGTAGCAA CP0594 626391 - 626011 - | hypothetical protein CP0595 627056 - 626562 - | hypothetical protein CP0596 627138 - 627010 - | hypothetical protein TERM 639 627081 - 627071 - GH 70 -2.6 -5.06585 | overlap 627065 627072 CAAACCATATAAAAA TTTT TTA AAAA ACGCAAGAACTGGCA CP0597 627302 - 627577 + | hypothetical protein TERM 640 627691 - 627661 - f 77 -9.2 -3.24289 | opp_overlap 627661 627664, overlap 627656 627664 627687 AGCCTAAACACGGAA GAAGAAACTTCTGT TCC AAAGAAATTTCTTC TTAAGATTCGAAGGA TERM 641 628775 - 628761 - f 70 -4.2 -4.77986 | TCAAAGATTTAAAAA CTAAGG CTT CCTTTG TTCGAATTACTGAAT TERM 642 629977 - 629959 - g 89 -11.8 -3.35706 | opp_overlap 629958 AAGGAGATTGTAGAA GCTATGGT TAT ACCATAGC ATTACGTGCTGTAGA CP0599 628854 - 630143 + | GMP synthase CP0600 630263 - 631267 + | hypothetical protein TERM 643 631409 - 631391 - g 95 -5.2 -5.81032 | opp_overlap 631391 TAATGTTAAAAAAAA GCGTCTCC AGA GAAGAAGC TTTCAAGAGAGTCGA CP0601 631378 - 631473 + | hypothetical protein TERM 644 631877 - 631888 + G 71 -4.4 -4.81863 | opp_overlap 631880 TGAAAGTAGATTAGT GAAG ATAA CTTC TTTTGTTATCGCTTT CP0602 631788 - 632582 + | hypothetical protein CP0603 632648 - 632875 + | hypothetical protein CP0604 632983 - 633315 + | hypothetical protein CP0605 633659 - 633324 - | hypothetical protein CP0606 634291 - 633704 - | hypothetical protein CP0607 634845 - 634288 - | hypothetical protein CP0608 635263 - 634892 - | hypothetical protein CP0609 635461 - 636489 + | hypothetical protein CP0610 636667 - 637494 + | dienelactone hydrolase family protein CP0611 637498 - 639132 + | diphosphate--fructose-6-phosphate 1-phosphotransferase CP0612 639428 - 639736 + | hypothetical protein TERM 645 640070 - 640058 - g 84 -5.5 -5.40004 | CATGAAACTAAAAAA CCCAC TGT ATGGG CCTTCATTTATTTTT CP0613 639770 - 640309 + | KDO-transferase 2, putative CP0614 640477 - 640905 + | hypothetical protein CP0615 640892 - 641434 + | KDO-transferase 2 CP0616 641510 - 641716 + | hypothetical protein CP0617 643309 - 641996 - | 3-deoxy-D-manno-octulosonic-acid transferase TERM 646 642752 - 642740 - G 71 -3.4 -5.06414 | GTCCTGTAATAAAAA TCCA TCTAC TGGA GAGAAATAGTTTTTA TERM 647 643302 - 643285 - G 74 -4.9 -4.7889 | gap 1 AGAAACACTTAAAAA TACGATGG ACA CC-TCGTA GCATCATAGGACAAA leuS 645768 - 643306 - | leucyl-tRNA synthetase TERM 648 644205 - 644175 - G 84 -9.8 -3.75863 | overlap 644178 AAAATCTCGAGTAAA GAAGATGAAGAACA GCG TGTTCTGCACCTCC AATGTAAAGATCTAC TERM 649 644202 - 644178 - G 74 -7.9 -4.0031 | overlap 644175 ATCTCGAGTAAAGAA GATGAAGAACA GCG TGTTCTGCACC TCCAATGTAAAGATC TERM 650 645843 - 645833 - g 81 -5.4 -5.21709 | opp_overlap 645833 CCCCAGAGGAAAAAA CAAG AGT CTTG TCCGTTTTTCCTTCA CP0619 645808 - 645930 + | hypothetical protein CP0620 645936 - 646886 + | hypothetical protein TERM 651 646891 - 646919 + F 83 -10.4 -3.29511 | opp_overlap 646889 GAACACTTTAAATTT CAGTTGTACCTT AATTC AAGGTACAACGG TTCTAGAACACTACA TERM 652 646999 - 647009 + G 70 -5.4 -4.52047 | overlap 647005 647007 AATTCGTTTCTTGAT TCCT CCT AGGA TTTTATCCTATAATG CP0621 646955 - 647074 + | hypothetical protein CP0622 647113 - 648579 + | hypothetical protein TERM 653 648685 - 648656 - T 93 -5.8 -5.77853 | gap 1, opp_overlap 648656 AATTGTGAAAAAAAA CCATAGAGAGCCT TTCCT AGTC-CTCTATGG TTTTCATTGCAGTTG TERM 654 648656 - 648685 + T 72 -5.8 -4.43309 | gap 1, opp_overlap 648656 AATTGTGAAAAAAAA CCATAGAGAGCCT TTCCT AGTC-CTCTATGG TTTTCATTGCAGTTG CP0623 653367 - 648754 - | hypothetical protein TERM 655 649284 - 649241 - G 83 -11.2 -3.53343 | opp_overlap 649241, overlap 649249 AATTCGTTTTTGAAA CTTTTAAATGCACCATACAA TAGA CTGACTGGTGCATCTAAAAG TATCTGCATATACTT TERM 656 651750 - 651766 + g 84 -2.9 -5.63504 | TTGTACTCTTCAATG CAAGGAC TTC GTCTTCG TTTTTTTGTAGGATT ligA 655486 - 653498 - | NAD-dependent DNA ligase LigA TERM 657 654032 - 654048 + g 72 -8 -3.78067 | ATTTCTTGCAGAGCG TTCCCG TATCC CGGGAA TTTGCATTAAATCTT TERM 658 655287 - 655275 - G 71 -3.3 -5.06585 | GAAACCACAGAAAAA GTTCC AGA GGGAC GATCTCCGAGACGTG CP0625 657355 - 655496 - | hypothetical protein TERM 659 657465 - 657435 - R 83 -6.9 -4.68209 | opp_overlap 657438 657441, overlap 657438 ATTGCAATAAACAAA CAAGAACCTCTAG TTATT CTTGAGGTTCTTT TAAAACAACGGAAGG TERM 660 657438 - 657462 + r 82 -8.6 -4.07568 | opp_overlap 657438 657435, overlap 657441 GCAATAAACAAACAA GAACCTCTAG TTATT CTTGAGGTTC TTTTAAAACAACGGA TERM 661 657462 - 657438 - R 89 -8.6 -4.43668 | opp_overlap 657438 657441, overlap 657435 GCAATAAACAAACAA GAACCTCTAG TTATT CTTGAGGTTC TTTTAAAACAACGGA CP0626 657976 - 657527 - | hypothetical protein CP0627 658588 - 658103 - | hypothetical protein CP0628 660397 - 658829 - | hypothetical protein TERM 662 660314 - 660324 + g 78 -4 -5.14645 | TATAACAGAAGCTTT CTTA TCA TAAG TTTTTGTTACATTAT CP0629 663256 - 660638 - | ATP-dependent Clp protease, subunit B TERM 663 662228 - 662201 - G 73 -5.6 -4.48713 | gap 1 TCCACGAAGAATAAA GACAGCATCCTCC AAA GAAGGCT-CTGTC ACAAAAATAGGCTGA TERM 664 663256 - 663268 + H 72 -2.7 -5.30348 | opp_overlap 663256, overlap 663256 AATTCACCCCAAGCA CTTTT TAA AAAGG TTTTTCTTATTACAT TERM 665 663569 - 663549 - H 86 -4.9 -5.59879 | opp_overlap 663552 CATAAACAGAAAAAA CAATTAAAA GAT TTTTAATTA CCTGAGAAATTATCA TERM 666 663970 - 663957 - g 74 -6.7 -4.24562 | opp_overlap 663955 663957 AAAAAACTAGAGAAA GCCTT AAAG AAGGC TCTATTTCTCTAGAT TERM 667 664883 - 664893 + G 76 -6.8 -4.4773 | AGACTCTCTCTAAGT CCAC AGT GTGG TTTTGCTTCATGTGA CP0630 663866 - 664990 + | hypothetical protein TERM 668 665036 - 664996 - f 85 -9 -4.14764 | opp_overlap 664999, overlap 664999 TTGGAAATAATGAAA CCAGAGCTGGTTGGAACC TCTAT AGATCCAACCAGCTCTTC CCTTTATGTACGTTA TERM 669 665033 - 664999 - f 100 -15.1 -3.08658 | opp_overlap 664999, overlap 664996 GAAATAATGAAACCA GAGCTGGTTGGAACC TCTAT AGATCCAACCAGCTC TTCCCTTTATGTACG TERM 670 664999 - 665033 + F 100 -14.4 -3.35695 | opp_overlap 664996 664999 GAAATAATGAAACCA GAGCTGGTTGGAAC CTCTATA GATCCAACCAGCTC TTCCCTTTATGTACG TERM 671 665150 - 665168 + F 71 -3.2 -5.08088 | opp_overlap 665154, overlap 665151 665154 TCCAACTATTGTCTA CTAAGAAT TCC ATTCTTAA TTTTTGTTCGCACTT CP0631 665399 - 666094 + | ribose-5-phosphate isomerase A CP0632 666091 - 666531 + | hypothetical protein CP0633 666545 - 667111 + | hypothetical protein TERM 672 668473 - 668495 + G 82 -5.6 -4.93898 | opp_overlap 668473 ATAGCCTGATTAAAA TCTTTGACTC TTC GGCTCAAAGA TTTTTCTAATAGTCT CP0634 667182 - 668504 + | glutamate-1-semialdehyde aminotransferase CP0635 668947 - 669702 + | hypothetical protein TERM 673 669710 - 669728 + F 71 -3.1 -5.08088 | opp_overlap 669711, overlap 669711 CCTTCTAATCTTTAA ACCAAGA TTTGT TCTTGGC TTTTTCTTAAAGATT TERM 674 670033 - 670022 - g 82 -3 -5.52384 | CTTTTATCAAAAAAA TTCT CTGT AGAA CGAAAATTAGACCAA TERM 675 671282 - 671258 - g 88 -10.8 -3.84406 | opp_overlap 671265 TCTGCAGCAGAACAA GGAACTCCTC TTACT GAAGAGTTCC TCTCCGCAACTTACG TERM 676 671461 - 671448 - g 73 -3.9 -5.00616 | overlap 671459 CCTTTGCTGAAAAAA TTCTT ACAC AAGAA CCAGGGGCTCTCGAA CP0636 669800 - 671635 + | oligoendopeptidase F TERM 677 671638 - 671668 + F 89 -10.7 -3.61398 | overlap 671638 TTCAGAAGATTGAGT TTTTAGCACTTAA AATTA TTGAGTGCTAAAA TTATTGCACAAAAAA groES 671753 - 672061 + | co-chaperonin GroES TERM 678 672358 - 672344 - g 70 -5.7 -4.25848 | overlap 672332 672331 AAGTCGCCAGCAAAA CTGCT GACAA AGCAG GCGACGGAACTACAA groEL 672103 - 673737 + | chaperonin GroEL TERM 679 673770 - 673799 + F 100 -13.8 -5.27938 | AACAATTTTCCATGA GGTCTCTTTTCT AACTAA AGAAAAGAGACC TTTTTCTTTGGGAAT CP0639 673867 - 674640 + | hypothetical protein CP0640 675614 - 674637 - | hypothetical protein TERM 680 675123 - 675112 - G 78 -2.2 -5.52347 | AATAAAATCAAAAAA GCCT CTCG AGAC AAACGATCCGCTTCC CP0641 676658 - 675618 - | hypothetical protein TERM 681 676090 - 676080 - G 73 -5.4 -4.69027 | overlap 676088 AAATGCACTCAAAAA CACT AAA AGTG AGACTCTCTCTATCC TERM 682 676732 - 676742 + H 70 -4 -5.00616 | opp_overlap 676732 ATTGCAAGACTTAAA GAAA ATC TTTC TTTTTTCAGAGACGA TERM 683 677358 - 677387 + G 70 -9.5 -2.80512 | opp_overlap 677354 677352, overlap 677357 677354 CTAAAAAATGAGCTC TTTTTTCCATCCT TCGA AGAATGGAAAAAA ATCTTTCTTAAAGAT TERM 684 677401 - 677389 - g 87 -4.9 -5.57054 | opp_overlap 677354, overlap 677354 677352 AAGAATGGAAAAAAA TCTTT CTT AAAGA TCCAGATTTCCTAAT CP0642 676956 - 678140 + | hypothetical protein CP0643 678924 - 678145 - | biotin apo-protein ligase-related protein CP0644 679040 - 678918 - | hypothetical protein TERM 685 679210 - 679223 + G 70 -5.3 -4.44915 | TGTACTTACCCGTTA TACCA TTTT TGGTA TTTTCTCCCTGATTG CP0645 679058 - 680074 + | hypothetical protein CP0646 682392 - 680113 - | hypothetical protein TERM 686 681061 - 681072 + gT 78 -5.8 -4.8048 | opp_overlap 681061, overlap 681042 TATTGTTTCCCAATA GAGC CTTT GCTC TTTTTGATATCGCAC TERM 687 681190 - 681210 + gT 75 -9.8 -2.66034 | opp_overlap 681193, overlap 681193 CTCCCTAAGATCCGA GAAGCACT GTTGA AGTGCTTC TAGTCTCACCTTTGT TERM 688 681263 - 681283 + gT 100 -14.1 -3.06087 | opp_overlap 681271 681272, overlap 681255 AACTCCTGACTTTGA CGCTCAAAG GCT CTTTGAGCG TCTTGCAAATCTATT CP0647 682507 - 682337 - | hypothetical protein TERM 689 682385 - 682366 - G 70 -2.8 -5.05442 | overlap 682378 AGAGAAAAAAAATAA TCCCATGC AATA GTATGAGA ATACCAATAACTAAT CP0648 683105 - 682593 - | hypothetical protein CP0649 684587 - 683130 - | hypothetical protein TERM 690 684208 - 684192 - G 75 -2.3 -5.28778 | ATGAGTCATAAAAAA CTCTT CGTTATC AAGAG CATTTCTAATATCTC TERM 691 685872 - 685888 + G 88 -12.3 -2.71263 | CTGAAAGTCGCCTAT GTGCTGG TAT CCAGCAC TCCTTAGAAGAACTT TERM 692 686058 - 686019 - g 84 -11 -3.72989 | opp_overlap 686028 AAATCGATACGCAAA TCCTCAATATGCAAAAGC GTAA GCTTTTACATATTCAAGA CATTTCTGGGACACT CP0650 685232 - 687430 + | exodeoxyribonuclease V, alpha subunit CP0651 689130 - 687475 - | methionyl-tRNA synthetase TERM 693 688455 - 688436 - G 76 -7.9 -4.19177 | ATCCCCCAAGATAAA TCTCGAG TAATGG CTCGAGA CCTGACATGTTCTAT CP0652 689423 - 689130 - | hypothetical protein gmk 690037 - 689420 - | guanylate kinase rnhB 690678 - 690034 - | ribonuclease HII rplS 691099 - 690734 - | 50S ribosomal protein L19 trmD 692212 - 691127 - | fused tRNA (guanine-N(1)-)-methyltransferase/uncharacterized domain-containing protein TERM 694 691351 - 691375 + g 70 -5.8 -4.30987 | GTAACCAGAATATGG TTTTGCCTTC ATGAG GAAGACAAAA TTTATTCTCGCAGCT rpsP 692585 - 692226 - | 30S ribosomal protein S16 CP0658 693922 - 692576 - | signal recognition particle protein FFH CP0659 694803 - 693937 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 695 694194 - 694179 - G 75 -9 -3.66028 | overlap 694170 TAGAACCTCCAACAA GAGCCT TCCA AGGCTC GTAACAACGCACTTC prfA 695866 - 694793 - | peptide chain release factor 1 TERM 696 694997 - 695011 + g 71 -4.2 -4.84529 | opp_overlap 694997 AGAACGCATAGCAGA CGCC TCGTTAT GGCG TTTTTGCATTTCTGC TERM 697 695125 - 695110 - G 73 -9 -3.52652 | opp_overlap 695110 695106 695112, overlap 695104 GGCATGTAACTACAA CACCTG TAGG CAGGTG TGTGATTCTCACCGC TERM 698 695811 - 695797 - G 76 -2.9 -5.39755 | opp_overlap 695791 695797 695806, overlap 695790 TAGAATTAGAAAAAA TTTCA GGATT TGAAA TTTTTATTTCGACTT TERM 699 695797 - 695811 + g 80 -3.6 -5.29846 | opp_overlap 695790 695797, overlap 695791 695806 TAGAATTAGAAAAAA TTTCAG GAT TTGAAA TTTTTATTTCGACTT TERM 700 696044 - 696075 + r 100 -19.6 -4.42386 | opp_overlap 696044 GCCCTCACAAAAAAA CCCATTCTCGGGCT TGAG AGCCTGAGAATGGG TTTTATAAATGGGAA TERM 701 696075 - 696044 - R 100 -17.4 -5.60993 | opp_overlap 696044 GCCCTCACAAAAAAA CCCATTCTCGGGCT TGAG AGCCTGAGAATGGG TTTTATAAATGGGAA rpmE2 696434 - 696105 - | 50S ribosomal protein L31 type B TERM 702 696852 - 696865 + G 71 -2.4 -5.19879 | TTGTTTCGCTCTCTT CTGA AGGTTC TCAG TTTTTCTCTTTAAAC CP0662 696515 - 697270 + | hypothetical protein CP0663 697357 - 697470 + | hypothetical protein CP0664 697467 - 699377 + | signal peptidase I, putative TERM 703 699389 - 699365 - T 75 -5.1 -5.00846 | opp_overlap 699378, overlap 699371 699375 GAAAGAGGAGAAAAA CCACAAGAA ATAACCA TTCTTATGG TTTTTCAGTTGTTTC TERM 704 699378 - 699389 + T 73 -4.4 -4.8384 | opp_overlap 699365 699375 699371 AACCACAAGAAATAA CCAT TCTT ATGG TTTTTCAGTTGTTTC ileS 702546 - 699415 - | isoleucyl-tRNA synthetase TERM 705 700928 - 700960 + g 73 -7.1 -4.11216 | overlap 700932 GCAGGAAATGCCTCT TCGGTTTCCTTTTGA TTT TCAAAAGGATAATGA TTTTGGGCATAAGGC TERM 706 702024 - 702008 - G 70 -5.1 -4.57341 | opp_overlap 702008 AATGCTGTTGAAAAA GGGACAA CTT TTGTACC TTCGTACACTAATCC CP0666 703344 - 703901 + | hypothetical protein TERM 707 704149 - 704131 - g 89 -3.8 -5.67967 | ACCAGCAGAAAAAAA CCAGAAAA TCT TTGCCTGG GCACTAAATCAATCA CP0667 704039 - 704812 + | hypothetical protein CP0668 706098 - 704824 - | phoH family protein CP0669 706354 - 707175 + | hypothetical protein TERM 708 707812 - 707796 - g 95 -8.1 -5.02074 | opp_overlap 707789 CTATGTTGCAAAAAA CTTTGTT GCT AACAAAG GACCCATCGAGCTGT CP0670 707326 - 708528 + | hypothetical protein TERM 709 708544 - 708568 + T 75 -8.5 -3.45405 | opp_overlap 708539 708544, overlap 708542 708539 CGAAGTATAATGATA GCTTCCAAAGG ATT CCAATGGAAGC TCTTCATTTTCTAGA TERM 710 708568 - 708544 - T 71 -8.5 -2.9953 | opp_overlap 708544 708542 708539, overlap 708539 CGAAGTATAATGATA GCTTCCAAAGG ATT CCAATGGAAGC TCTTCATTTTCTAGA CP0671 709721 - 708687 - | cytochrome D ubiquinol oxidase, subunit II CP0672 711078 - 709732 - | cytochrome D ubiquinol oxidase, subunit I TERM 711 710803 - 710781 - G 75 -2.1 -5.27769 | gap 1 AGAAAAAAGCAAAAA CACCTTCACT ACCT AAT-AAGGTG CCGAAAATATTTCCT TERM 712 712000 - 711989 - g 70 -7.2 -3.75937 | opp_overlap 711988 711993 ATAGATAGATTCAAA GCGG TACT CCGC AGTATTCTTTCCCCT CP0673 711269 - 712063 + | hypothetical protein TERM 713 712824 - 712811 - g 79 -6.7 -4.59773 | opp_overlap 712810 TTTTATTTTTAAAAA GGGAA TGCA TTCCC CTAAATTTAAATTTA TERM 714 713109 - 713087 - g 71 -2 -5.21709 | TTTTAGATGAAAAAA CTTTAGAAAA TAC TTTTCTTCAG ACTATTATAGCCCAA CP0674 712045 - 713322 + | hypothetical protein CP0675 713358 - 713657 + | hypothetical protein TERM 715 714460 - 714449 - g 70 -5.8 -4.40804 | opp_overlap 714449 TATTAGCTTATAAAA CAGG TTTT CCTG TGATTGCTGTTAATG TERM 716 715083 - 715071 - g 91 -6.3 -5.51046 | TAAAGAGAGAAAAAA CTTCA AGG TGAAG TCGAAGGGGCCCTGA CP0676 713710 - 715098 + | lipid A biosynthesis lauroyl acyltransferase CP0677 716646 - 715192 - | pyruvate kinase TERM 717 716316 - 716305 - G 70 -5.8 -4.2461 | overlap 716301 716311 ACCCTCAGGAACAAA GGGA AATA TCCC CTTAGGATAGAGAGA TERM 718 717682 - 717697 + G 78 -9 -3.86897 | TCTCCTCATGCCCTG GAGAGC CGTT GCTCTC TTTGTCAAGGATCCG TERM 719 717707 - 717717 + G 70 -5.4 -4.46514 | GCTCTCTTTGTCAAG GATC CGG GATC TTTATTTCCATAGAT TERM 720 719349 - 719338 - g 70 -5.8 -4.24404 | opp_overlap 719337 719338 ATTCAAAGGCTAAAA CTCG CTCA CGAG CTTCTCTTTGCTTCT TERM 721 721246 - 721281 + G 86 -9.8 -3.99806 | gap 1, overlap 721237 721247 CATGCCGATCACGCG ATCTTCTTG-GGTCCAG GAT CTGGACCTCAAGGAGGA TTTCTCATGGATTCT TERM 722 721247 - 721280 + G 100 -13.3 -2.99161 | gap 1, overlap 721237 721246 ATGCCGATCACGCGA TCTTCTTG-GGTCCAG GAT CTGGACCTCAAGGAGG ATTTCTCATGGATTC CP0678 716887 - 722367 + | excinuclease ABC subunit A pknD 725206 - 722408 - | serine/threonine-protein kinase TERM 723 725080 - 725063 - G 74 -6.3 -4.56597 | opp_overlap 725065, overlap 725065 TGCCTCTCGTAAAAA CCTCCTT TTCA AAAGAGG ATTTTCTGCAAGATC TERM 724 725065 - 725081 + g 70 -5.9 -4.38154 | opp_overlap 725063 725065 CCTCTCGTAAAAACC TCCTTTT CAA AAGAGGA TTTTCTGCAAGATCT valS 728049 - 725227 - | valyl-tRNA synthetase TERM 725 726117 - 726101 - G 75 -2.3 -5.28983 | TCTAAAATATAAAAA TCTTCAA GCC CTAAAGA GTCTTCATCAATACC TERM 726 727335 - 727376 + g 100 -16.8 -3.69332 | opp_overlap 727348 ATGATGCATAGCGCT CGTCGTTAGGAGACACTG CGATCC CAGTGTCTCCTAATGAAG TTTCGGGTCTTGTTG CP0681 728704 - 728183 - | hypothetical protein TERM 727 728343 - 728359 + gr 89 -9.5 -4.09108 | TACCCCGCACTTTGA TTGACCT CAT AGGTCAA TTTCTCTACCTTGCC CP0682 729050 - 728625 - | V-type ATP synthase subunit K TERM 728 728679 - 728668 - G 71 -3 -5.04356 | GCAAACAATGAAAAA GATT CGAC AATC CCAATCGCTGCATAA CP0683 731127 - 729145 - | V-type ATP synthase subunit I TERM 729 730811 - 730798 - G 70 -3.7 -4.89477 | opp_overlap 730799, overlap 730799 CTCTGAAGAAGAAAA TGCCC CTAG GGGCT TGACTCTAACAATCT CP0684 731747 - 731118 - | V-type ATP synthase subunit D CP0685 733048 - 731732 - | V-type ATP synthase subunit B CP0686 734828 - 733053 - | V-type ATP synthase subunit A CP0687 735622 - 734822 - | hypothetical protein CP0688 736297 - 735671 - | V-type ATP synthase subunit E TERM 730 735757 - 735767 + g 73 -5.4 -4.70613 | AGGAACTAAGATCCA GAAC CCA GTTC TTTTCTTCAACTTTT TERM 731 736314 - 736329 + H 75 -4.8 -4.86731 | overlap 736322 ATATTTTACCGCTTA TTCTTT TAGA AAAGAA TTTTCTTTAAAAAAG TERM 732 736584 - 736601 + G 71 -4.1 -4.82901 | opp_overlap 736584 736586, overlap 736586 TCTTCTAGATCCAAA GATTCCC TATT GGGAATA TTTTTCTGAAAACGA CP0689 736476 - 736610 + | hypothetical protein TERM 733 736690 - 736700 + F 90 -4 -5.80727 | opp_overlap 736690 AACTAACTACATAAT TTTC TAT GAAA TTTTTTATTCTTTTT TERM 734 737416 - 737406 - g 73 -5.4 -4.59853 | GCAATCCTTGAAAAA GCTT TGG AAGC TCTGCAAAACGAAAA CP0690 736695 - 737438 + | hypothetical protein CP0691 737839 - 737447 - | hypothetical protein CP0692 738875 - 737886 - | transaldolase B TERM 735 738963 - 738920 - R 95 -4.9 -6.36459 | gap 2, opp_overlap 738922 738932, overlap 738922 738923 GTTAACAAAAAAAAA CATTCCTATCAAGGAGGTTGT AAAC ATAACCTCCTTGATAA-AA-G ACTGTGTCACCTAGT TERM 736 738963 - 738922 - R 93 -8.9 -4.81831 | opp_overlap 738922 738932, overlap 738920 738923 TAACAAAAAAAAACA TTCCTATCAAGGAGGTTGT AAAC ATAACCTCCTTGATAAAAG ACTGTGTCACCTAGT TERM 737 738962 - 738923 - R 93 -12.4 -3.45438 | opp_overlap 738922 738932, overlap 738920 738922 AACAAAAAAAAACAT TCCTATCAAGGAGGTTGT AAAC ATAACCTCCTTGATAAAA GACTGTGTCACCTAG TERM 738 738932 - 738953 + r 74 -9.5 -3.14683 | opp_overlap 738923 738920 738922, overlap 738922 AAACATTCCTATCAA GGAGGTTGT AAAC ATAACCTCC TTGATAAAAGACTGT CP0693 743171 - 738978 - | DNA-directed RNA polymerase subunit beta' TERM 739 742131 - 742146 + g 75 -3.2 -5.22039 | opp_overlap 742107, overlap 742133 TTTTCCTAAAAGATT TTGACG GAAG CGTCCA TTTTTTCCCTTTAAC TERM 740 742509 - 742523 + g 71 -2.1 -5.10933 | TTTGGCTAACTTCAT TCTCG CTTGC TGAGA TTTTGTTTTGCGTAA TERM 741 742954 - 742972 + g 77 -4.6 -5.0133 | CAGCAACATTCCCAA TCTTTAGT AGG ACCAAAGA TTTTTTCACAAAATA rpoB 746971 - 743183 - | DNA-directed RNA polymerase subunit beta TERM 742 746883 - 746903 + g 95 -4.7 -5.76949 | ATTTCGATAAGATTT GGAAGGTCT GGG ATATCTTCC TTTTTTTTAACACTG TERM 743 746992 - 747018 + r 76 -3.6 -5.28176 | overlap 746993 CCCTAAATTAAGCCT ACGTATGCTTCT AAA GGGAGCATTCGG TTTTTTATACATGAA TERM 744 746993 - 747017 + r 70 -7.1 -3.76182 | overlap 746992 CCTAAATTAAGCCTA CGTATGCTTCT AAA GGGAGCATTCG GTTTTTTATACATGA TERM 745 747071 - 747042 - R 100 -13.9 -5.52079 | opp_overlap 747047 ACATGAAAAGAAAAA GAAAAGAAAAATC TTTC GATTTTTCTTTTC TACAAATTACAGTCC TERM 746 747047 - 747066 + r 83 -8 -4.4017 | opp_overlap 747042 AAAAGAAAAAGAAAA GAAAAATC TTTC GATTTTTC TTTTCTACAAATTAC rplL 747467 - 747078 - | 50S ribosomal protein L7/L12 rplJ 748023 - 747511 - | 50S ribosomal protein L10 TERM 747 747888 - 747830 - G 93 -12 -3.58269 | opp_overlap 747837 747853 747875 747883, overlap 747831 747853 747880 CAATCTACCTCTAAA CCTGCAGCTTCTATAGCTTTAAAGAAGA TTC TCTTCTTTAAAACTTCAAATTCTGCAGA AACTCCAGAAAGTGA TERM 748 747887 - 747831 - G 93 -13.3 -2.7464 | opp_overlap 747837 747853 747875 747883, overlap 747830 747853 747880 AATCTACCTCTAAAC CTGCAGCTTCTATAGCTTTAAAGAAGA TTC TCTTCTTTAAAACTTCAAATTCTGCAG AAACTCCAGAAAGTG rplA 748737 - 748039 - | 50S ribosomal protein L1 rplK 749189 - 748764 - | 50S ribosomal protein L11 nusG 749844 - 749296 - | transcription antitermination protein NusG secE 750100 - 749849 - | preprotein translocase subunit SecE TERM 749 750205 - 750240 + r 82 -7.6 -4.62872 | opp_overlap 750211, overlap 750206 CTAAGCTACACACCC AGAAAATCGCGATGAT GAAA ATCATCGCGAAATTCA TTTTTAAGCATTGAT TERM 750 750206 - 750239 + r 87 -11.1 -3.37 | opp_overlap 750211, overlap 750205 TAAGCTACACACCCA GAAAATCGCGATGAT GAAA ATCATCGCGAAATTC ATTTTTAAGCATTGA TERM 751 750234 - 750211 - R 100 -14 -4.46155 | opp_overlap 750206 750205 TACACACCCAGAAAA TCGCGATGAT GAAA ATCATCGCGA AATTCATTTTTAAGC tuf 751428 - 750244 - | elongation factor Tu infA 751846 - 751625 - | translation initiation factor IF-1 CP0703 752117 - 753148 + | hypothetical protein CP0704 753145 - 753606 + | hypothetical protein CP0705 755674 - 754112 - | hypothetical protein TERM 752 755785 - 755797 + H 74 -9.1 -3.02043 | opp_overlap 755784 GAGAAGGCAGACTAG GAGCG CCC CGCTC TATTACAACAAAGTT CP0706 756293 - 756868 + | hypothetical protein TERM 753 756877 - 756908 + T 100 -10.4 -4.40237 | opp_overlap 756875 756873 756877 756882, overlap 756882 AAAATAAACTAGAGA GAAAATGTTCCA TAACATCT TGGAACATTTTC TTTTGATCTCTCCTC TERM 754 756908 - 756877 - T 80 -10.4 -3.13164 | opp_overlap 756877 756882, overlap 756875 756873 756882 AAAATAAACTAGAGA GAAAATGTTCCA TAACATCT TGGAACATTTTC TTTTGATCTCTCCTC TERM 755 756903 - 756882 - T 70 -4.5 -4.65494 | opp_overlap 756882 756877, overlap 756877 756875 756873 AAACTAGAGAGAAAA TGTTCCA TAACATCT TGGAACA TTTTCTTTTGATCTC TERM 756 756882 - 756903 + T 76 -4.5 -5.16132 | opp_overlap 756877 756875 756873 756882, overlap 756877 AAACTAGAGAGAAAA TGTTCCA TAACATCT TGGAACA TTTTCTTTTGATCTC TERM 757 756979 - 757000 + T 84 -6.7 -5.12068 | opp_overlap 756978 CTATTTCCAAAGATG TATCTAGAG CCTC TTCTAGATA TTTTTATTCGGTATA CP0707 758243 - 757140 - | hypothetical protein TERM 758 757850 - 757889 + g 71 -2.1 -5.10154 | overlap 757855 ATGCAGATCTCATTG GGATATCCGTAGCGGTT CTTCCA AAATGCTCCGGATCTTC TTTTTCCTTTTCCAT TERM 759 758360 - 758331 - R 72 -8.1 -3.41738 | opp_overlap 758333, overlap 758314 758329 758333 758338 TATTTTAACAGAATA GACCAAATAAAAA CATG TTTTTATTTGGTT TTAATGTCAACGAGA TERM 760 758358 - 758333 - R 86 -10.7 -3.27382 | opp_overlap 758333, overlap 758331 758329 758338 TTTTAACAGAATAGA CCAAATAAAAA CATG TTTTTATTTGG TTTTAATGTCAACGA TERM 761 758333 - 758358 + r 100 -10.7 -4.34402 | opp_overlap 758333 758331 758329 758338 TTTTAACAGAATAGA CCAAATAAAAA CATG TTTTTATTTGG TTTTAATGTCAACGA CP0708 760271 - 758538 - | hypothetical protein TERM 762 759119 - 759109 - G 76 -6.8 -4.55826 | opp_overlap 759112, overlap 759110 CTTAAAACACGAAAA TGCC GCC GGCA GCCTGGACGATTTGT CP0709 762293 - 760542 - | hypothetical protein TERM 763 762367 - 762353 - R 70 -2.2 -5.27938 | overlap 762355 ATTTTTAAATAAAAA TCTTAA TAA TTAAAA AACTCTTAGAAAATA CP0710 762850 - 762617 - | hypothetical protein CP0711 763084 - 762926 - | hypothetical protein TERM 764 762976 - 762955 - G 72 -7.3 -3.95787 | overlap 762947 TATTAGACGTAGAAA GGCATCTTC CTAA GAAGATTCC CAAAGTAAAACTATA CP0712 763443 - 763327 - | hypothetical protein CP0713 764888 - 763503 - | hypothetical protein TERM 765 764039 - 764049 + g 73 -5.4 -4.73092 | GAGCTTCAAGAGCTT GTCT TAC AGAC TTTCTTTTACATTGT CP0714 765662 - 764985 - | PTS system, IIA component CP0715 766141 - 765665 - | PTS system, IIA component dut 766580 - 766143 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 766 766430 - 766459 + g 71 -10.1 -2.57132 | overlap 766430 ACCCTTCGGGAATTT CTGCTTTGATTCC GGTA GGGATCAAAGCAC GTTGTCCAGGCAGCA TERM 767 766430 - 766460 + g 76 -9.9 -3.28712 | gap 1, overlap 766430 ACCCTTCGGGAATTT C-TGCTTTGATTCC GGTA GGGATCAAAGCACG TTGTCCAGGCAGCAG TERM 768 766557 - 766536 - G 70 -9.5 -2.78384 | TCCTGGCGTAGTATA TTCAGGAAG TTCT CCTCCTGAA TCCAATTCACAAAAT CP0717 767557 - 766631 - | acetyl-CoA carboxylase subunit beta TERM 769 767058 - 767045 - G 71 -3.1 -4.93877 | CTGCATTAAAGAAAA TACAG ATTC CTGCA TACGTGCGCCTCCAG CP0718 768262 - 767639 - | superoxide dismutase TERM 770 768363 - 768379 + r 75 -8 -3.78934 | opp_overlap 768362 768363 TTCGGATACAACAAT GGCCTT GAAAG AAGGCC TTATTCTGAAGGAGA CP0719 770243 - 768447 - | phosphoglucomutase/phosphomannomutase, putative TERM 771 768952 - 768968 + g 72 -6.5 -4.28188 | TCTGCAATCAATGCT GACGCAA TAA TAGCGTC TTTATCTTCTACGTG TERM 772 769878 - 769856 - G 77 -4.8 -5.011 | opp_overlap 769855 769871, overlap 769858 ACTGAAACAAGAAAA CTTCGCAG CCATTAC CTGCGAGG ACTTTTGCAGTTTCT CP0720 771067 - 770603 - | hypothetical protein rnc 771173 - 771886 + | ribonuclease III TERM 773 772820 - 772838 + GF 90 -7.4 -5.08483 | overlap 772822 AGTAAGGAAGACTGC GGGATTCG ATC CGAATCGC TTTTCTTTACTTTTA CP0722 771852 - 773213 + | DNA repair protein RadA CP0723 773191 - 773895 + | porphobilinogen deaminase CP0724 774137 - 773982 - | hypothetical protein TERM 774 775289 - 775300 + G 90 -4.4 -5.59879 | overlap 775280 CGCTACTGCTTCTTG GCAT TCTA ATGC TTTTTTCTCTTTCTA CP0725 774895 - 775377 + | hypothetical protein CP0726 777504 - 775387 - | hypothetical protein TERM 775 776028 - 775979 - G 91 -13 -2.7419 | gap 1, opp_overlap 775979, overlap 775990 ATATCATGGTAATGA GCTGCAAC-CAAGCAATAGAGGC TATCT GCACCTATAGCTTGAGCTGCAGC TTCTGCTAAGCTTCC TERM 776 775979 - 776028 + g 71 -8.6 -3.42574 | gap 1, opp_overlap 775979 775990 ATATCATGGTAATGA GCTGCAAC-CAAGCAATAGAGGC TATCT GCACCTATAGCTTGAGCTGCAGC TTCTGCTAAGCTTCC TERM 777 777558 - 777529 - R 89 -8.7 -4.46155 | opp_overlap 777527 777529 CACACACTTAGAAAA CTTCGTCTCACAA CCAT TTATGAGAGGAAG TCTGTAGTTTTACCT CP0727 777688 - 777536 - | hypothetical protein CP0728 780132 - 777925 - | hypothetical protein TERM 778 779464 - 779479 + g 71 -3.2 -5.03314 | opp_overlap 779465 779476, overlap 779465 TTCTAATGCCCCAAA AGCCTT ATCA AAGGCA TTTTTTGCCACTCCA TERM 779 779478 - 779465 - G 71 -6.7 -4.11484 | opp_overlap 779464 779465, overlap 779476 TCTAATGCCCCAAAA GCCTT ATCA AAGGC ATTTTTTGCCACTCC TERM 780 780362 - 780336 - R 77 -8.9 -3.5332 | gap 1, overlap 780332 AAATTTTTAAAGCAA CACAACTCATAG GTTT CTA-GAGTTGTG CTAGGAACGATCTTC CP0729 780782 - 780420 - | hypothetical protein CP0730 782754 - 780826 - | hypothetical protein TERM 781 781939 - 781954 + g 75 -3.2 -5.14563 | opp_overlap 781940, overlap 781930 781940 TTCCAAGCTTCCAAA AGCCTT ATCA AAGGCA TTTTTTGCTGCCCCA TERM 782 781953 - 781940 - G 71 -6.7 -4.11484 | opp_overlap 781930 781939 781940 TCCAAGCTTCCAAAA GCCTT ATCA AAGGC ATTTTTTGCTGCCCC TERM 783 781963 - 781975 + g 77 -4.8 -5.06414 | overlap 781972 AAAGGCATTTTTTGC TGCC CCATA GGCA TTTTTGTTAAAAGCC CP0731 783019 - 782873 - | hypothetical protein CP0732 783798 - 783016 - | hypothetical protein CP0733 785205 - 783856 - | hypothetical protein TERM 784 785452 - 785395 - R 89 -11.7 -3.41073 | opp_overlap 785398 785401 785417, overlap 785398 785417 785428 785441 TATTTTATTCAAAGA GATTCATTTTCCTTCTAAAGAAGAATT CACA AATTCTATTTTAGAAGGAAAATCATTC CATCTCTGCGAAAAG TERM 785 785398 - 785449 + r 95 -14.2 -3.15999 | opp_overlap 785395 785398 785417 785428 785441, overlap 785401 785417 TTTATTCAAAGAGAT TCATTTTCCTTCTAAAGAAGAATT CACA AATTCTATTTTAGAAGGAAAATCA TTCCATCTCTGCGAA TERM 786 785449 - 785398 - R 84 -12 -2.56124 | opp_overlap 785398 785401 785417, overlap 785395 785417 785428 785441 TTTATTCAAAGAGAT TCATTTTCCTTCTAAAGAAGAATT CACA AATTCTATTTTAGAAGGAAAATCA TTCCATCTCTGCGAA TERM 787 785401 - 785446 + r 100 -15.9 -2.78154 | opp_overlap 785398 785395 785417 785428 785441, overlap 785398 785417 ATTCAAAGAGATTCA TTTTCCTTCTAAAGAAGAATT CACA AATTCTATTTTAGAAGGAAAA TCATTCCATCTCTGC CP0734 785542 - 785447 - | hypothetical protein TERM 788 785521 - 785508 - G 78 -2.4 -5.4505 | GTCTTCAAGAAAAAA TCTC TTAAAT GAGA AAATGAGCTTTCTAT TERM 789 785783 - 785796 + G 71 -2.3 -5.18726 | AGCGAGGATGGCGAG CCCTG CAAC CAGTG TTTTTCTTGTAAAGA CP0735 785558 - 786886 + | DNA polymerase III subunits gamma and tau CP0736 786951 - 787241 + | hypothetical protein CP0737 789082 - 787367 - | phosphoenolpyruvate-protein phosphotransferase CP0738 789409 - 789083 - | phosphocarrier protein HPr CP0739 789887 - 789402 - | hypothetical protein TERM 790 789852 - 789829 - G 82 -6 -5.02074 | overlap 789838 789841 TGATGCCCTAAAAAA TCTAGAAGAG GAGG CTCTCCTTGA AACCCACAACGACCA CP0740 789934 - 790257 + | hypothetical protein CP0741 790172 - 791635 + | hypothetical protein TERM 791 792688 - 792678 - g 89 -6.8 -5.30155 | opp_overlap 792677 TCATTAAGGAAAAAA TGCG CCG CGCA ATTACATTGAAAGAT CP0742 791717 - 792994 + | hypothetical protein CP0743 795063 - 793027 - | 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta subunit TERM 792 793970 - 793950 - G 75 -8.3 -3.86252 | opp_overlap 793948 793945 793950 CCTCACCAAAGACAA TGACTCCAG AAT CTCGAGTCA TCTCTTCTACAAGGG TERM 793 794817 - 794803 - G 77 -8.6 -4.06001 | TAGAAACGAAGCAAA GATCTC AGA GAGATC ACAACCCAAGCCTAT CP0744 796278 - 795100 - | dnaJ protein rpsU 796490 - 796314 - | 30S ribosomal protein S21 TERM 794 796664 - 796652 - R 74 -3.5 -5.2166 | CAACAATGTAAAAAA TATTT AGA AAATA CAAATCAAAAAATAC CP0746 797310 - 796669 - | hypothetical protein TERM 795 796824 - 796808 - G 73 -3.6 -4.91511 | overlap 796810 ATCTTATCAGAAAAA CTGCTC GCAAA GAGCTG CGGATTAGGAGAAAT CP0747 797446 - 797814 + | hypothetical protein CP0748 797876 - 798661 + | hypothetical protein CP0749 798967 - 801426 + | Lon family protease TERM 796 801460 - 801507 + F 73 -8.9 -3.18571 | gap 1, opp_overlap 801459 801462 801505, overlap 801460 801462 TGTTCTCTTGAGAAT CACTATTTTTATACGCATTAAG GTAGA TTTAATGCGTATAAAAA-AGTC TGTATATTTACAAAC TERM 797 801505 - 801462 - f 81 -10.8 -2.82623 | gap 1, opp_overlap 801462 801460 801460, overlap 801459 TTCTCTTGAGAATCA CTATTTTTATACGCATTAA GGTAGAT TTAATGCGTATAAAAA-AG TCTGTATATTTACAA TERM 798 801462 - 801505 + F 87 -11.5 -3.15257 | gap 1, opp_overlap 801459 801462, overlap 801460 801460 TTCTCTTGAGAATCA CTATTTTTATACGCATTAAG GTAGA TTTAATGCGTATAAAAA-AG TCTGTATATTTACAA TERM 799 801522 - 801505 - f 80 -4.9 -5.25803 | opp_overlap 801460 801460, overlap 801459 AATGCGTATAAAAAA GTCTGTA TATT TACAAAC AGACCTTGAATACAT CP0750 801576 - 802442 + | hypothetical protein TERM 800 802533 - 802503 - f 77 -3.5 -5.44638 | opp_overlap 802503 ATAAGAAAAACAAAA TTTTAAATGATAA AAAAG TTGTCATTCAAAA GTTGTAGTGGCGTAT CP0751 802597 - 803520 + | ribonuclease Z xerC 803605 - 804543 + | site-specific tyrosine recombinase XerC TERM 801 805337 - 805325 - g 74 -6.9 -4.39166 | overlap 805326 TGGTAGAGATGAAAA CCGCG TCT CGCGA GCAAGAAAAGGCCGA CP0753 804598 - 806190 + | ABC transporter, ATP-binding protein maf 806219 - 806809 + | Maf-like protein TERM 802 807056 - 807041 - g 77 -4.6 -5.04325 | CGCAAACTAGAAAAA GCACCA TCAT TGGAGC AGGCCTGGCGGGATC TERM 803 807126 - 807110 - g 75 -8.7 -3.68619 | opp_overlap 807120 CCCAAGCTATGGAAA CTGCAGA CCC CCTGCAG CAGCTACTGGTTTTA CP0755 806791 - 808497 + | hypothetical protein TERM 804 809395 - 809426 + G 73 -7.4 -4.07687 | opp_overlap 809392 809395, overlap 809404 TTCTGGAGAATACCA TCTCAGCGATAGTT GGGA AACTGTTGCTGACA TTTTCCCCAACAACT CP0756 808487 - 810601 + | hypothetical protein TERM 805 810729 - 810697 - T 100 -17.3 -2.87211 | AGGTCTCGTCAGACA TGGGGTTTCTTCTTT ATA AAAAAAGAAACCCCA TGAACTATAGAAATT TERM 806 810841 - 810821 - T 77 -9.1 -3.31515 | opp_overlap 810823, overlap 810824 AAATACTCTCTACAA TAAGGAACT CTC AGTTCCCTA TTAAAATCGGTATTT TERM 807 810838 - 810824 - T 79 -8.6 -3.7941 | opp_overlap 810823, overlap 810821 TACTCTCTACAATAA GGAACT CTC AGTTCC CTATTAAAATCGGTA TERM 808 811937 - 811965 + T 81 -11.1 -2.86747 | opp_overlap 811932 811944, overlap 811933 811942 TCTAGAAGGAGCTAC TTCAAGAGGCTTC TGA GAAGCATCTTGAG TAATTATAGTCCCTC TERM 809 812672 - 812650 - T 70 -4.1 -4.82901 | gap 1, opp_overlap 812667 CTGTGTTGATAAAAA TGGCACCTCC TAGA GG-GGTGGCA TGAGTCACTACGTTA TERM 810 812708 - 812696 - T 71 -5.5 -4.46926 | overlap 812698 TACGTTATTAGAAAA GAGAG CGC CTCCC TGCCCTCCCAAAATC CP0758 813883 - 813695 - | hypothetical protein TERM 811 814002 - 813946 - R 76 -3.8 -5.34632 | gap 1, opp_overlap 813960, overlap 813956 813958 813960 AATAAAATACAAAAA GCAAGACAAAGAGAGGGCTCTATGAAA TCTC TTACATAGAGCCCTGGC-TTACCCTGA TGCTATCTCGTTGGA TERM 812 813993 - 813956 - R 100 -9.9 -4.34766 | opp_overlap 813960, overlap 813946 813958 813960 AAAAAGCAAGACAAA GAGAGGGCTCTATGAAA TCTC TTACATAGAGCCCTGGC TTACCCTGATGCTAT TERM 813 813991 - 813958 - R 90 -11.1 -3.74137 | opp_overlap 813960, overlap 813956 813946 813960 AAAGCAAGACAAAGA GAGGGCTCTATGAAA TCTC TTACATAGAGCCCTG GCTTACCCTGATGCT TERM 814 813960 - 813989 + r 89 -13.7 -2.54193 | opp_overlap 813960 813958 813956 813946 AGCAAGACAAAGAGA GGGCTCTATGAAA TCTC TTACATAGAGCCC TGGCTTACCCTGATG TERM 815 813989 - 813960 - R 95 -13.7 -3.42943 | opp_overlap 813960, overlap 813958 813956 813946 AGCAAGACAAAGAGA GGGCTCTATGAAA TCTC TTACATAGAGCCC TGGCTTACCCTGATG TERM 816 814122 - 814108 - R 75 -7.2 -4.22346 | overlap 814101 814116 CAAACTGACTGAAAA CTTCAA AGT TTGAAG CAAAGGCATGATGAT TERM 817 815673 - 815641 - R 74 -6.3 -4.39748 | opp_overlap 815648, overlap 815633 815642 GATCATAGAAAATAA CTTTATTTCCCCGAG TCG CTCGGAGATTTAAAA ATTTTGCATTCGATG TERM 818 815648 - 815666 + r 77 -8.8 -3.66666 | opp_overlap 815633 815642 815641 GAAAATAACTTTATT TCCCCGAG TCG CTCGGAGA TTTAAAAATTTTGCA TERM 819 815693 - 815675 - R 70 -4.6 -4.70659 | opp_overlap 815675, overlap 815677 TCGGAGATTTAAAAA TTTTGCAT TCG ATGCAAGA TCTATAGCATTTCTG TERM 820 816924 - 816908 - R 83 -8.1 -4.35405 | GAAAAAAATTAGAAA GTGTTTT AGC AAAACAC TAAAATGGAAATCGA TERM 821 816986 - 816936 - R 93 -11.5 -3.95448 | gap 1, opp_overlap 816936 816949, overlap 816949 ACACTAAAATGGAAA TCGAAATCGAAAAGAGCCTTCAAG AAAT CTTAAAAGCTCTTTTCC-CTTCGA TGTATGGAGCTCTTT TERM 822 816974 - 816949 - R 93 -9.1 -4.37198 | opp_overlap 816936 816949, overlap 816936 AATCGAAATCGAAAA GAGCCTTCAAG AAAT CTTAAAAGCTC TTTTCCCTTCGATGT TERM 823 817899 - 817885 - R 74 -5.6 -4.82667 | CCAGCACACCAAAAA GCACGG TCT CCCTGC AACCCTTCGTTTGCA TERM 824 819360 - 819396 + r 73 -8.7 -3.33261 | opp_overlap 819359 819379 TTTGTCAAACTCAAG CTACCCGTAGAGCAGCT AAC GGCTCCTTTGCCGGTAG TTATCGAACTTCCAG TERM 825 819448 - 819471 + r 75 -9.6 -2.73875 | opp_overlap 819449, overlap 819445 AAGAAAACCCTATAA ACGTGGTAGA TTTA TCTACCACGC TGCTGTTAACAGCAG TERM 826 819470 - 819449 - R 100 -13.1 -3.98009 | opp_overlap 819448 819445 AGAAAACCCTATAAA CGTGGTAGA TTTA TCTACCACG CTGCTGTTAACAGCA TERM 827 820059 - 820030 - R 81 -10.1 -3.37056 | ACTACGTATCTATAA CCATGGCTATCAT TTTA AAAATAGCCATGG AAAAATAGCATCGAA CP0761 822610 - 820085 - | polymorphic membrane protein G family protein TERM 828 821355 - 821377 + g 74 -4 -4.98672 | overlap 821356 821359 TCTATACGAATATCT TTCTGAGCTG TGG CAGCACTGAG TTTTATCTTTTTCCC TERM 829 822761 - 822745 - R 72 -5.8 -4.31737 | opp_overlap 822753, overlap 822737 822741 AAAAGTAGCAAGAAA GGCTCG CTTTC CAAGCC AAAATCTTGGGAGTT TERM 830 822893 - 822866 - R 77 -9.3 -3.281 | opp_overlap 822843, overlap 822864 TGGCAACTCACAATA GCACCTCTTTT CGAATC AAAAGAGGTAC AAAGAAGATCCTCAG TERM 831 822919 - 822900 - R 78 -7.9 -4.10791 | AAGAGGTACAAAGAA GATCCTC AGCTAA GAGGATC CCTAGAGAAATGGAA CP0762 824550 - 822979 - | hypothetical protein CP0763 825302 - 824577 - | hypothetical protein TERM 832 825088 - 825075 - G 73 -5.3 -4.68655 | overlap 825063 CAATCCTAAAACAAA TAGGA CAAC TCCTA GAGAAATCGTACTAA TERM 833 825451 - 825431 - R 74 -9.1 -3.00766 | AATAGTGCACATAGA CTCCTAGAA TAG TTCTAGGAA TGGTCCTCGCGAGTA CP0764 827769 - 825445 - | hypothetical protein TERM 834 826499 - 826509 + g 71 -6.8 -4.09108 | TAGTTCTCTTCGATA GCCT CAT AGGC TTTCTCTAAATTAGA CP0765 829386 - 828079 - | hypothetical protein CP0766 830316 - 829513 - | hypothetical protein CP0767 830514 - 830422 - | hypothetical protein CP0768 830754 - 830626 - | hypothetical protein CP0769 833668 - 830702 - | hypothetical protein TERM 835 832673 - 832647 - GR 71 -7.9 -3.54459 | opp_overlap 832641 832648, overlap 832648 GGAAGTCTTGCTAAA GCGGCTTCAGC TTCCT GCTGCAGCCGT ATACTCTCTTCATCT TERM 836 832672 - 832648 - GR 83 -11.4 -2.72461 | opp_overlap 832641 832648, overlap 832647 GAAGTCTTGCTAAAG CGGCTTCAGC TTCCT GCTGCAGCCG TATACTCTCTTCATC TERM 837 832648 - 832672 + gr 83 -11.4 -2.92889 | opp_overlap 832648 832647, overlap 832641 GAAGTCTTGCTAAAG CGGCTTCAGC TTCCT GCTGCAGCCG TATACTCTCTTCATC TERM 838 834172 - 834144 - R 89 -8.9 -4.62441 | overlap 834147 GTTTAGACAAATAAA GAACCCCTAAAGA ATG TCTCTAGGGGCTG AGGTGATACGAGTAT TERM 839 834169 - 834147 - R 100 -12.8 -4.41158 | overlap 834144 TAGACAAATAAAGAA CCCCTAAAGA ATG TCTCTAGGGG CTGAGGTGATACGAG CP0770 837074 - 834306 - | polymorphic membrane protein G family protein TERM 840 835831 - 835850 + g 70 -9.4 -2.82491 | GGATCGTTTGCTAGA CTCTTTTC TCCA GAAAAGAG TATGGTCCCTGTGTA TERM 841 836204 - 836217 + g 70 -5.3 -4.41616 | AAATGGCTCCGCCAC CCATT ATGG AATGG TTTCTTTCAAAGACT TERM 842 837294 - 837335 + r 95 -9 -5.00616 | opp_overlap 837302, overlap 837297 837302 AAATGTGTATTTAGA TAAAAAAAGCATGTTAGA AAGATC TCTAACATGCTTTTATGA TTTTTTAAGACAGAC TERM 843 837297 - 837332 + r 87 -10.7 -3.37655 | opp_overlap 837302, overlap 837294 837302 TGTGTATTTAGATAA AAAAAGCATGTTAGA AAGATC TCTAACATGCTTTTA TGATTTTTTAAGACA TERM 844 837327 - 837302 - R 100 -11.3 -5.72616 | opp_overlap 837297 837294 837302 ATTTAGATAAAAAAA GCATGTTAGAA AGAT CTCTAACATGC TTTTATGATTTTTTA TERM 845 837302 - 837327 + r 100 -10.6 -4.76171 | opp_overlap 837302, overlap 837297 837294 ATTTAGATAAAAAAA GCATGTTAGA AAGATC TCTAACATGC TTTTATGATTTTTTA gatB 838831 - 837365 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 846 837591 - 837613 + g 74 -9.9 -3.09834 | opp_overlap 837590 TTCTCTTTTAAAATC TCCTCAGGA TTCTT TCCTGGGGA TTCCATCATAAGATC TERM 847 838327 - 838314 - G 71 -6.7 -4.17906 | AAGGAAACCAAAGAA GTTGC GTAA GCAAC AGCATCTTCAGGACA gatA 840306 - 838828 - | aspartyl/glutamyl-tRNA amidotransferase subunit A gatC 840628 - 840323 - | aspartyl/glutamyl-tRNA amidotransferase subunit C CP0774 840784 - 840632 - | hypothetical protein TERM 848 840938 - 840950 + G 70 -7.7 -3.64549 | TAGGCAAAATTATTC GAGGA TTA TCCTC TCTTATTGTTATTCT TERM 849 841097 - 841107 + G 73 -5.4 -4.64846 | TTGCTGGTGTCATTT GCTT GCT AAGC TTTTGTCCTTTCTGC CP0775 840919 - 841200 + | hypothetical protein TERM 850 841207 - 841233 + T 81 -7.4 -4.431 | gap 1, opp_overlap 841200, overlap 841207 841209 AAAAATTAGATGTTT C-ACCCTCAAG CCTCTT CTTGAGGGTAG TTTTCTGCCTAGATA TERM 851 841209 - 841230 + T 83 -10.2 -3.18788 | opp_overlap 841200, overlap 841207 841207 AAATTAGATGTTTCA CCCTCAAG CCTCTT CTTGAGGG TAGTTTTCTGCCTAG TERM 852 841559 - 841528 - T 74 -5.2 -4.71382 | gap 1, opp_overlap 841538, overlap 841529 ACAAGGATCTAAAAA CGGCATAAAAAACGC CTT GCGTGTCT-ATGCCA TCCACAGGATACCAT CP0776 842420 - 841596 - | hypothetical protein CP0777 843462 - 842593 - | hypothetical protein TERM 853 842924 - 842913 - G 78 -4.4 -5.24129 | CGCCTTTATAAAAAA CAGA GGCA TCTG AGGGGGCACTATCGA CP0778 843834 - 843715 - | hypothetical protein CP0779 844107 - 845549 + | hypothetical protein TERM 854 845564 - 845540 - f 75 -5.1 -4.97405 | opp_overlap 845544 AGGGATAAAAATAAA CAAAGAATAAG ATT CCTATTTTTTG CCGCGAAGCTTTTGT CP0780 845921 - 847291 + | hypothetical protein CP0781 847919 - 847488 - | hypothetical protein TERM 855 848543 - 848528 - g 80 -2.6 -5.45726 | overlap 848539 GAGATCTTAAAAAAA CTCTAT GAGA ATAAAG TCCAAGACTCTAAAA CP0782 848174 - 849070 + | ribonuclease HIII def 849697 - 849137 - | peptide deformylase TERM 856 849192 - 849208 + g 71 -2.3 -5.10077 | overlap 849188 849194 CGACGTTTGATCTTC TCTAAAG AGG CTTTAAA TTTTTTAGGATCTTT secG 850297 - 849941 - | preprotein translocase subunit SecG CP0785 850713 - 850534 - | hypothetical protein tpiA 851481 - 850717 - | triosephosphate isomerase TERM 857 851118 - 851100 - G 71 -6.6 -4.21773 | CTCCAACACAAAGAA CAGGCACG AGT CCCGCCTG AGCTACAGACTTTAC TERM 858 852005 - 851995 - g 82 -3.2 -5.53288 | CGCAACTGAAAAAAA GAAG CCC CTCC CCTTTGCTCCTCAAT TERM 859 853007 - 852996 - g 78 -2.2 -5.50313 | TACAAAACCAAAAAA TCGC CTAT GCAA ATGTCAAGGAAACTT TERM 860 853219 - 853229 + G 71 -6.8 -4.2349 | opp_overlap 853219 GATTCAGTTGCAAGA TGGC GAG GCCA TTTTAACTGTCACAA xseA 851612 - 853276 + | exodeoxyribonuclease VII large subunit xseB 853280 - 853507 + | exodeoxyribonuclease VII small subunit CP0789 853512 - 853769 + | hypothetical protein TERM 861 854288 - 854312 + G 71 -9.5 -2.94354 | opp_overlap 854307, overlap 854270 CAGATTTATCGAAGT TTGTTGTTATT TTG AATGACAACAA TATGTCGATCTCTAA CP0790 853774 - 855708 + | 1-deoxy-D-xylulose-5-phosphate synthase ksgA 856584 - 855751 - | dimethyladenosine transferase CP0792 857684 - 856593 - | hypothetical protein TERM 862 857532 - 857516 - G 80 -6.5 -4.88918 | overlap 857517 CTACCTTAAACAAAA TGCGATC GTG GATCGCT AGACCTGAAGGATCC TERM 863 857531 - 857517 - G 78 -10 -3.52628 | overlap 857516 TACCTTAAACAAAAT GCGATC GTG GATCGC TAGACCTGAAGGATC CP0793 859935 - 857833 - | hypothetical protein TERM 864 858367 - 858347 - G 70 -2.6 -4.98436 | gap 1, overlap 858349 TCAACACTATAAAAA CCTCC-TTC TTCT GAACGGAAG GAAAGGACGACTTCT TERM 865 859491 - 859540 + g 100 -15.3 -3.53012 | gap 1, opp_overlap 859494, overlap 859494 AATGAAGCTTATCAA TAATTTGTGGGAATGAGGGAAGAC CGA GTTTTCCCTCGTTCCC-CAAATAG TTTACAGAGAAAAAA TERM 866 859537 - 859494 - G 100 -14.8 -3.73534 | gap 1, opp_overlap 859491 859494 GAAGCTTATCAATAA TTTGTGGGAATGAGGGAAGAC CGA GTTTTCCCTCGTTCCC-CAAA TAGTTTACAGAGAAA TERM 867 859494 - 859537 + g 100 -19.2 -2.90496 | gap 1, opp_overlap 859494, overlap 859491 GAAGCTTATCAATAA TTTGTGGGAATGAGGGAAGAC CGA GTTTTCCCTCGTTCCC-CAAA TAGTTTACAGAGAAA TERM 868 860057 - 860030 - R 72 -9.4 -2.65751 | opp_overlap 860034 860037, overlap 860029 TGATGAACAGAAGAG CTAACCATTTTA TAAA TAAAATAGTTAG TAATAATTAAAACAC CP0794 860932 - 860201 - | hypothetical protein CP0795 861738 - 860908 - | hypothetical protein TERM 869 861060 - 861047 - G 71 -6.7 -4.13014 | TCCAGAGCTCCAAAA GCCTT TTCA AAGGC CGTCTTCGCCACTCC TERM 870 861819 - 861794 - R 93 -3.1 -6.06529 | overlap 861795 GACAGACAAAAAAAA GCCCCTACAGA GTGG TCTGGGGGGGG GGGGGGGTAGCTGTG TERM 871 861818 - 861795 - R 71 -6.6 -4.21477 | overlap 861794 ACAGACAAAAAAAAG CCCCTACAGA GTGG TCTGGGGGGG GGGGGGGGTAGCTGT TERM 872 861965 - 861947 - R 83 -8.2 -4.43877 | GAATTTTTAAAGAAA CACAACTC TTG GAGTTATG CTAGGAATGGTCCTC CP0796 862691 - 861966 - | hypothetical protein CP0797 864274 - 862706 - | hypothetical protein TERM 873 863004 - 863014 + g 71 -6.8 -4.09108 | TAGTTCTCTTCGATA GCCT CAT AGGC TTTCTCTAAATTAGA CP0798 864695 - 864591 - | hypothetical protein TERM 874 864681 - 864652 - G 100 -14.5 -5.67063 | opp_overlap 864652 CCTATTATAAAAAAA GCCATTCCCATTT TTTC AAATAGGAATGGC TTTTTCAAGTCCAAG TERM 875 864652 - 864681 + g 100 -12.3 -4.62069 | opp_overlap 864652 CCTATTATAAAAAAA GCCATTCCCATTT TTTC AAATAGGAATGGC TTTTTCAAGTCCAAG CP0799 865264 - 864713 - | hypothetical protein TERM 876 864866 - 864819 - G 74 -8 -3.95324 | gap 1 CATTGTGAATAACAA TTCTGAATAACTT-CGCTAACTT GGA AAGTCATCGCAAGCTTTTCAGAA ATCATTAAACTTTCT CP0800 866000 - 865245 - | hypothetical protein CP0801 866455 - 866144 - | hypothetical protein dapA 867491 - 866616 - | dihydrodipicolinate synthase CP0803 868822 - 867500 - | aspartate kinase TERM 877 867526 - 867544 + g 74 -7.6 -3.9093 | CTATAGCTTTTTGTT TTACATAA TCA TTATGTAA TTCTTCTATAATACC TERM 878 867808 - 867818 + g 70 -5.4 -4.52047 | CATCCATTACAAATC CAAC GAC GTTG TTTTGTGCTATCATC TERM 879 868539 - 868521 - G 70 -6 -4.37971 | opp_overlap 868520, overlap 868523 AAAATACGAGCAAAA TCGAGATC TGA GATCTCCA GATGTTGTAGATAGG CP0804 869811 - 868810 - | aspartate-semialdehyde dehydrogenase TERM 880 869593 - 869583 - G 71 -3.2 -5.08015 | AAGGCAAAAAAGAAA CAAC GAT GTCG GACTGCACTTCCTCG CP0805 870865 - 870071 - | dihydrodipicolinate reductase TERM 881 870936 - 870948 + GH 71 -4.9 -4.58283 | overlap 870941 TCGACACAAATGCAT TTCTA TTT TAGAA TTTTTCAAAAACTTA phhA 870742 - 871830 + | phenylalanine 4-monooxygenase CP0807 871821 - 872519 + | hypothetical protein TERM 882 872656 - 872634 - f 100 -13.6 -5.34555 | opp_overlap 872634 872629 872640 TCATACCATAAAAAA TAGGAACCAA AAA TTGGTTCCTA TTGACTTTCTCTAAA TERM 883 872634 - 872656 + F 95 -13.6 -3.35695 | opp_overlap 872634, overlap 872629 872640 TCATACCATAAAAAA TAGGAACCAA AAA TTGGTTCCTA TTGACTTTCTCTAAA CP0808 872726 - 873721 + | biotin synthase TERM 884 873884 - 873858 - g 100 -15.2 -3.28405 | AGAATACATTACCAA GCTCCATGCGAT AGA ATCGCTTGGAGC TACAGGGTCTCGGCT CP0809 873700 - 874848 + | 8-amino-7-oxononanoate synthase CP0810 874827 - 875486 + | dethiobiotin synthase BioD, putative TERM 885 875794 - 875784 - gf 71 -5.4 -4.50241 | opp_overlap 875784 875782, overlap 875774 875772 AAATAGCAATGAAAA TTGC TGT GCAA TATTACTACAATCAA TERM 886 875825 - 875815 - gf 74 -6.8 -4.35682 | opp_overlap 875815 875814 CTACAATCAAAACAA GGCT AAG AGCC ATTTTGTTGGACTCA TERM 887 876503 - 876525 + GF 71 -4.8 -4.61231 | opp_overlap 876505, overlap 876506 GTACTCGCTCTAGAT TACCCTGCAG AAG CTACAGGATA TTTTTCACAATATAG CP0811 875423 - 876694 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 888 876719 - 876756 + G 73 -9.9 -3.05844 | gap 1, opp_overlap 876712, overlap 876710 TCCACACAGCCTCTC GTTGGGAGC-CCGTTCTC AAA GAGATCGTAGCTTCCAAC TATTGGCATGCACAA TERM 889 876844 - 876818 - g 85 -2.2 -5.86061 | overlap 876819 876832 GTGGAGCAAAAAAAA TCTCCGCAAG TGAACAT CCTACGGAGG TAAAGGAAGAAGTTT TERM 890 877239 - 877225 - g 80 -11.4 -2.6732 | opp_overlap 877222, overlap 877224 877222 CGTGAACTTAAAGAT CTCCCC CAC GGGGAG GAACTCTTAGGCTAT CP0812 876676 - 877347 + | hypothetical protein TERM 891 878124 - 878151 + GF 74 -9.2 -3.01001 | gap 1, opp_overlap 878112, overlap 878122 TAACTGGTGATTTCA GCAGC-GCAGC TTTCATT GCTGCAGCTGC TCTACTTTCAAAATC TERM 892 878445 - 878424 - gf 75 -7.3 -4.11501 | overlap 878420 CTAAAGACAAGGAAA GCGATCGCA TTCT TGCAATCAC CGAAGAACTACAGAA TERM 893 878624 - 878644 + GF 89 -11.3 -3.35371 | CACAACACTGCGTGC GTTAGGAAA ACC TTTCCTAAC TTCGTTCAGACTCTA CP0813 877418 - 878755 + | 3-phosphoshikimate 1-carboxyvinyltransferase CP0814 878691 - 879221 + | shikimate kinase CP0815 879218 - 880297 + | chorismate synthase TERM 894 880344 - 880365 + G 86 -10.3 -3.82061 | opp_overlap 880347, overlap 880347 AGTGAAACTCATATC CAACTTCTT CCAG AAGAAGTTG TTCTCTTCTATATCC TERM 895 881371 - 881386 + G 70 -7.6 -3.6336 | overlap 881381 GGTACCTATTGTGCA TCTCCA AATA TGGAGA TTCTCTATGATATAC aroB 880282 - 881436 + | 3-dehydroquinate synthase aroDE 881417 - 882850 + | bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein CP0818 882900 - 883688 + | hypothetical protein CP0819 883917 - 885233 + | hypothetical protein CP0820 885267 - 885854 + | hypothetical protein TERM 896 885966 - 885938 - g 89 -11.8 -3.31461 | TAGTCAGTTCCATAA TTGGGGGAGG GATTTTCAG CCTCCCCCAA AACATGGCAGCGACA TERM 897 887072 - 887056 - g 77 -3.6 -5.08169 | opp_overlap 887056 ACATATCCTAAAAAA GGGTCT ATTAA AGCCCC TTTGGCAATGATAAC CP0821 885865 - 887322 + | amino acid permease CP0822 887531 - 888577 + | DadA family oxidoreductase CP0823 889391 - 888570 - | hypothetical protein CP0824 890401 - 889415 - | malate dehydrogenase TERM 898 890680 - 890666 - R 89 -11.4 -3.4582 | overlap 890664 CTAGGTGATTAAAGA GGTCCC TTA GGGACC GGCGGATGCCAGACC CP0825 892239 - 890659 - | hypothetical protein TERM 899 890935 - 890951 + g 74 -9.5 -3.28791 | opp_overlap 890935, overlap 890914 890928 TGAGTTTCTCACGAA GGTATCT TTG AGATACC TTGTAGCCAGCACCT TERM 900 890951 - 890935 - G 72 -9.5 -3.14564 | opp_overlap 890914 890928 890935 TGAGTTTCTCACGAA GGTATCT TTG AGATACC TTGTAGCCAGCACCT TERM 901 891040 - 891017 - G 73 -8.8 -3.42943 | gap 1, overlap 891015 891019 AGCAATACAAATACA GACCCC-CCTG TCT CAGGCGGGGGC AAACCAAATGAGGCC TERM 902 891037 - 891019 - G 78 -10.2 -3.27129 | overlap 891017 891015 CAATACAAATACAGA CCCCCCTG TCT CAGGCGGG GGCAAACCAAATGAG CP0826 892417 - 892274 - | hypothetical protein TERM 903 892504 - 892492 - R 77 -4.8 -5.10208 | GAACCTTAAGAAAAA CCTC TCTCT GAGG TAGACTTATGAAAGG pgi 894112 - 892532 - | glucose-6-phosphate isomerase TERM 904 893212 - 893191 - G 81 -9.5 -3.74178 | gap 1, opp_overlap 893190, overlap 893184 893194 TAATCAAAGCTGAAA GCATAGGGAG ATT CTCCCTA-GC GTTCGGTTGCAAAGC TERM 905 893210 - 893194 - G 79 -10.9 -2.9587 | opp_overlap 893190, overlap 893191 893184 TCAAAGCTGAAAGCA TAGGGAG ATT CTCCCTA GCGTTCGGTTGCAAA TERM 906 894220 - 894231 + G 71 -3 -5.04597 | opp_overlap 894220 ACAACGATTCTAGAA CAAT TCTC ATTG TTTTTATCTGTAGAT TERM 907 894417 - 894429 + G 80 -2.7 -5.55695 | AGCGCGTAGGCTCAT TGCTT TAA AAGTA TTTTTTCTCTTCTTA xerD 894178 - 895083 + | site-specific tyrosine recombinase XerD CP0829 895379 - 895080 - | hypothetical protein TERM 908 895399 - 895411 + H 77 -4.9 -5.13722 | opp_overlap 895399, overlap 895394 AAGATCTCTAAAAAA TCTAA CCC TTAGA TTTTATTTTACTACG TERM 909 895411 - 895399 - H 77 -4.9 -5.04987 | opp_overlap 895399 895394 AAGATCTCTAAAAAA TCTAA CCC TTAGA TTTTATTTTACTACG TERM 910 895619 - 895638 + H 79 -4.4 -5.2894 | gap 1, opp_overlap 895619 AGTGTTTTTTGCAAA CAAAAA-CC CTT GGATTTTTG TTTTATTTTCTCTTT CP0830 895628 - 895744 + | hypothetical protein TERM 911 896417 - 896401 - g 90 -5.8 -5.42975 | GCAGAGAAACAAAAA GAGGCC CTGAC GACCTC AAAATCTCATGAACT TERM 912 896538 - 896526 - g 71 -4.1 -4.855 | TAAAAAGAAAAAGAA GAAAC GTG GTCTC GGTGTAGAGGCAGTC CP0831 895741 - 897201 + | hypothetical protein CP0832 897201 - 897719 + | type III secretion chaperone CP0833 897735 - 899267 + | hypothetical protein TERM 913 899415 - 899397 - g 79 -11 -2.90904 | overlap 899394 GCAGAAGTACAAGTA GCTCTCCC TGC AGGAGAGC AATATGCGATGCTGA TERM 914 900030 - 900018 - g 75 -3.4 -5.17507 | AAAAGCCAACAAAAA GATG AAGAA CATC GAGATCAAAGGCAAC TERM 915 900430 - 900447 + G 71 -9.9 -2.7186 | overlap 900432 900439 CAACGTTAGGTATTT TAGGAGC GATT GCTCCTA TGGTTGGAGAAATTT CP0834 899286 - 900779 + | hypothetical protein CP0835 901441 - 900782 - | hypothetical protein TERM 916 900902 - 900866 - G 72 -8.1 -3.85603 | TTCAGTAAAGAAACA TTCCTTCCCCCTTGA GAAAGAG TCTAAAGGGAAGGAA ATACTAATGACTACA ispH 902408 - 901476 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 917 902471 - 902441 - R 93 -10.6 -3.95893 | gap 1, opp_overlap 902439 AAAAGACATATGAAA CGCGCTTCACAAT GCTTAT ATTG-GAAGCGCG CATATTAAAGCAATA CP0837 904372 - 902513 - | hypothetical protein CP0838 905786 - 904518 - | hypothetical protein TERM 918 905130 - 905114 - G 70 -5.1 -4.55383 | overlap 905120 AACCTATAAAAATAA TCCAAAG ACT CTTAGGA GGCGCAGATTGTAAC CP0839 905988 - 907685 + | sulfate transporter family protein TERM 919 907744 - 907734 - T 74 -5.4 -4.7033 | opp_overlap 907735, overlap 907735 CAAGGGAAGAGAAAA CGTA CGC TACG GTACTTTACAATACA fumC 909169 - 907787 - | fumarate hydratase CP0841 909221 - 910996 + | ABC transporter, permease protein, putative TERM 920 911010 - 910982 - f 100 -14 -3.44051 | opp_overlap 910985, overlap 910985 CCGTCACTACCAGAA GAACAGAGTGTG TAACT CACACCCTGTTC TAAAAAATATTACCT TERM 921 911007 - 910985 - f 83 -9.9 -3.85864 | opp_overlap 910985, overlap 910982 TCACTACCAGAAGAA CAGAGTGTG TAACT CACACCCTG TTCTAAAAAATATTA TERM 922 911911 - 911930 + G 81 -9.4 -3.7626 | overlap 911908 911926 TCCTCTTCGTTACTT TTGGAAGA AGCT TCTTCCAA TTCTTGGATATTTCT CP0843 911742 - 912350 + | hypothetical protein CP0844 912356 - 913231 + | methionine aminopeptidase CP0845 914474 - 913188 - | hypothetical protein TERM 923 913392 - 913382 - G 70 -5.4 -4.49556 | opp_overlap 913382, overlap 913362 913363 913361 TTCTTACTAAAGAAA GAGT CTC ACTC TTTTCTAGAAACTGC TERM 924 914186 - 914170 - G 78 -5.1 -4.96646 | CCAGATAACCAAAAA GAGACAT ATA AGGTCTC TCCAACAACATACTT CP0846 914689 - 914504 - | hypothetical protein CP0847 914942 - 915427 + | hypothetical protein CP0848 915481 - 916002 + | hypothetical protein CP0849 916017 - 916538 + | hypothetical protein CP0850 916618 - 917325 + | hypothetical protein CP0851 917552 - 917322 - | hypothetical protein TERM 925 917496 - 917449 - G 71 -7 -4.16284 | opp_overlap 917458 917467, overlap 917450 ATAGGTTGCAATAAA TCTTCAGGAGTGAGGTTAGGAA CAAT TTCCTCTCCTAACTTCTGAAGT CGTGACTCCTGATCC TERM 926 917495 - 917450 - G 77 -10.5 -3.09288 | opp_overlap 917458 917467, overlap 917449 TAGGTTGCAATAAAT CTTCAGGAGTGAGGTTAGGAA CAAT TTCCTCTCCTAACTTCTGAAG TCGTGACTCCTGATC CP0852 918009 - 917542 - | cytidine/deoxycytidylate deaminase family protein CP0853 918114 - 918245 + | hypothetical protein rpsO 918257 - 918526 + | 30S ribosomal protein S15 TERM 927 918515 - 918526 + F 79 -4.4 -5.29385 | ATTACAAGATTGAAT CTAC GTAA GTAG TTTTTTCGTTCCCTT TERM 928 918960 - 918973 + G 70 -8.1 -3.63968 | overlap 918968 CCTCTTGCTATCTGC GCAGC ATCT GCTGC TTTAGCAATTTCAGA TERM 929 919916 - 919935 + G 72 -6.4 -4.39277 | overlap 919919 CGGTTGCCTCGCTCT TATGGACG CTGG CGTCCCTA TTTCTTCTCCTATTG TERM 930 919968 - 919992 + G 70 -7.9 -3.65986 | GGAATTGCTATGGGA TTGATCCTTGA TGA TCAAGGAGCGA TTATCCTTTCTGATA TERM 931 920630 - 920613 - g 71 -4.1 -4.90869 | overlap 920615 AGCATCAATGAAAAA GGTCAAC TTAA GTTGAGC CATAAAGCAACTCTA CP0855 918567 - 920651 + | polynucleotide phosphorylase/polyadenylase TERM 932 920715 - 920692 - f 100 -10.4 -4.4261 | opp_overlap 920692 CGCTTAACATGAAAA GCTAGTCTTC TTAG AAAGACTAGC TTTTTTTATGATTAC TERM 933 920692 - 920715 + F 100 -9.7 -5.71983 | opp_overlap 920692 CGCTTAACATGAAAA GCTAGTCTT CTTAGA AAGACTAGC TTTTTTTATGATTAC TERM 934 920767 - 920791 + G 100 -13.7 -4.13945 | opp_overlap 920767, overlap 920770 ATTGAGACAAAAAAA GAACCTAGGAG GAT TTCCTAGGTTC TTTTCGGATCAGAAT TERM 935 920791 - 920767 - g 100 -13 -5.72616 | opp_overlap 920767 920770 ATTGAGACAAAAAAA GAACCTAGGA GGATT TCCTAGGTTC TTTTCGGATCAGAAT TERM 936 920770 - 920788 + G 85 -9.6 -4.19746 | opp_overlap 920767, overlap 920767 GAGACAAAAAAAGAA CCTAGGAG GAT TTCCTAGG TTCTTTTCGGATCAG CP0856 920723 - 920815 + | hypothetical protein CP0857 923559 - 920827 - | cell division protein FtsH, putative TERM 937 922113 - 922099 - G 71 -3.4 -4.92314 | overlap 922101 AGCAATGGAGAAAAA GGGACG GTC CGCCTC TCCAGATACAGCCTT TERM 938 922894 - 922910 + g 73 -5.1 -4.64766 | TTCCACTTGCTGGTA GAGATCT TTA AGTTCTC TTTTTAGCGTCTCAG CP0858 924706 - 923747 - | MesJ/Ycf62 family protein TERM 939 924662 - 924629 - G 75 -9.1 -3.58518 | opp_overlap 924629, overlap 924627 AAGAGCAAGCAAATA TCTTTTTTTTACATC TAAA GAAGCAAAAAAAAGA TCTAATTGCTTATCA TERM 940 925292 - 925275 - g 80 -3.5 -5.37043 | ACTCTACAGAAAAAA GAAAACA ATCG TATTTTC ATCGCTGTAGATCAT TERM 941 925402 - 925387 - g 74 -4 -4.98255 | TGGGAATTATAAAAA GTATCA TCCC TGACAC TACTAAAGATACTGT CP0859 924825 - 925898 + | hypothetical protein TERM 942 926364 - 926331 - g 93 -13.3 -2.82491 | opp_overlap 926337, overlap 926333 926337 GATAGAGGCACGACA GATAAAGAGCAGGGA AAAA TTCCTGCTCTTTACC TCAAAGATCAAACAG TERM 943 926362 - 926333 - g 93 -12.3 -2.95774 | opp_overlap 926337, overlap 926331 926337 TAGAGGCACGACAGA TAAAGAGCAGGGA AAAA TTCCTGCTCTTTA CCTCAAAGATCAAAC TERM 944 926358 - 926337 - g 83 -8.7 -4.1523 | opp_overlap 926337, overlap 926333 926331 GGCACGACAGATAAA GAGCAGGGA AAAA TTCCTGCTC TTTACCTCAAAGATC TERM 945 926337 - 926358 + G 84 -10.9 -3.6502 | opp_overlap 926337 926333 926331 GGCACGACAGATAAA GAGCAGGGA AAAA TTCCTGCTC TTTACCTCAAAGATC CP0860 925902 - 927002 + | hypothetical protein CP0861 929016 - 926971 - | hypothetical protein TERM 946 927369 - 927380 + g 88 -3 -5.7946 | GCAAAAGCTTATCAT TTCT GAAT AGAA TTTTTTTCTTAGCAA TERM 947 929259 - 929239 - R 79 -8.3 -4.06384 | opp_overlap 929235 929239, overlap 929240 GTTGAATACCAGAAA CTCGTGGCT CTT AGCCACAAA GTTCCTCTATCGGAA TERM 948 929258 - 929240 - R 77 -9.6 -3.03348 | opp_overlap 929239 929235, overlap 929239 TTGAATACCAGAAAC TCGTGGCT CTT AGCCACAA AGTTCCTCTATCGGA pheS 930400 - 929381 - | phenylalanyl-tRNA synthetase subunit alpha TERM 949 929781 - 929763 - G 73 -3.8 -4.99035 | overlap 929764 TGATCTACATAAAAA GCTTCCAC TTG ATGGAAGA GCACATGAGAACGTG TERM 950 929833 - 929857 + g 73 -5.8 -4.56702 | opp_overlap 929824 AACATAGGCCGGGGG CAACAACTTT GATTG GAGGTTGTTG TTTCTTTAGTTCACG TERM 951 930256 - 930286 + g 80 -2.6 -5.53991 | overlap 930260 TATCTGTACATTGCT TTAATTTTTCTGAG AAA CTCCGAAAAATTCC TTTTTTTCCTAAGTA TERM 952 930260 - 930282 + g 74 -7.8 -4.06295 | overlap 930256 TGTACATTGCTTTAA TTTTTCTGAG AAA CTCCGAAAAA TTCCTTTTTTTCCTA TERM 953 930425 - 930435 + r 79 -5.4 -5.07053 | opp_overlap 930420, overlap 930420 AATCCCTAAACTGTG GCTT CCA AAGC TTTTTTAGCCTGGTT rplT 930780 - 930415 - | 50S ribosomal protein L20 rpmI 930993 - 930799 - | 50S ribosomal protein L35 infC 931531 - 930971 - | translation initiation factor IF-3 TERM 954 931253 - 931270 + g 72 -6.3 -4.30995 | ATCATTTTCGTCTAT GTTAGGC TTAA GCTTAAC TTCTTTTATGCGCAC nusB 931911 - 932402 + | transcription antitermination protein NusB TERM 955 932806 - 932816 + G 82 -6.8 -4.87665 | CATCCCTGGGTCGGT TGGC GGG GCCA TTTTTATGAATGCAG murB 932429 - 933343 + | UDP-N-acetylenolpyruvoylglucosamine reductase CP0868 933899 - 933297 - | hypothetical protein TERM 956 933361 - 933347 - G 90 -4.2 -5.61881 | TCTGAAAAATAAAAA GTCTAG GGG CTCGAC ACCGATTCGCTACAT trmB 934691 - 934017 - | tRNA (guanine-N(7))-methyltransferase TERM 957 934464 - 934450 - G 93 -10 -4.26903 | CTTACCCTATCAAAA CGCTGT TCC ACAGCG ATCCAAAGTACTTGA CP0870 934816 - 934688 - | hypothetical protein TERM 958 934818 - 934786 - G 100 -10.7 -4.70879 | overlap 934788 GGGAAAGCTGAAAAA TCCTGAGAGACGATC TAA GACCATCTCTCAAAA CTCCCTTGAAAAAGA TERM 959 934816 - 934788 - G 76 -11.1 -2.6436 | overlap 934786 GAAAGCTGAAAAATC CTGAGAGACGATC TAA GACCATCTCTCAA AACTCCCTTGAAAAA CP0871 935881 - 934841 - | ribonucleotide-diphosphate reductase subunit beta TERM 960 934882 - 934898 + g 77 -3.7 -5.09762 | opp_overlap 934892, overlap 934872 934871 934885 934892 GGTATTCGGTAACCC GGGTTTC AAA GAAATTC TTTTCTTTATTCAGA TERM 961 935126 - 935147 + g 70 -2.9 -5.03961 | overlap 935127 935128 GATTTCTTCTTGTAG TTCCGTAGT CCAA ACTTCGGGG TTTTCTTCTTTAATT TERM 962 935313 - 935283 - G 76 -7 -4.51699 | overlap 935284 935312 AGAATCATTACAAAA CCACTATAGAAGAA GAT TCCTTCCATAATGA TATAGTATCCTACTA CP0872 939036 - 935902 - | ribonucleotide-diphosphate reductase subunit alpha TERM 963 935958 - 935978 + g 71 -9.7 -2.57916 | overlap 935957 GGGTTGTTTTTCTTT CGACCACAA TAC TTGTGGACG CTGATTTATTTTTCA TERM 964 938390 - 938403 + g 70 -8.1 -3.64466 | TCTTTATTAGCACGG GCTCG TGCA CGAGC TTCTCTATATAAAAT CP0873 939415 - 940212 + | CDP-diacylglycerol--serine O-phosphatidyltransferase, putative CP0874 940221 - 941456 + | hypothetical protein CP0875 944384 - 941460 - | insulinase family metalloprotease TERM 965 941701 - 941676 - G 82 -8.3 -4.4009 | gap 1 TTTTAGCCTATAAAA CGCTACGGAAGC ACG GCTTCC-TGGCG CTACGGGCATATCCA TERM 966 942062 - 942038 - G 74 -10.1 -3.15544 | opp_overlap 942038 942045, overlap 942045 CTGCACGTGCAGGAA TATGCAACCCC CGA GAGGTTACATA TAAGTTTATACTTGG TERM 967 943993 - 943975 - G 86 -10.4 -3.90112 | GCCTCTTGAAGGAAA CTTTGCTT GGT AAGCAAAG GATGAAACACGGCGT CP0876 944433 - 945914 + | M20/M25/M40 family peptidase TERM 968 945908 - 945935 + T 71 -7.8 -3.5511 | opp_overlap 945909 945912, overlap 945906 945909 945912 GCTTCCTAAAATAAA AGAGTGAAGAGA GAAC TCTCTTCATTCC TCTTTATGAATCAAA TERM 969 945909 - 945934 + T 83 -11.3 -2.72745 | opp_overlap 945909 945912, overlap 945908 945906 945912 CTTCCTAAAATAAAA GAGTGAAGAGA GAAC TCTCTTCATTC CTCTTTATGAATCAA TERM 970 945934 - 945909 - T 100 -9.1 -5.07652 | opp_overlap 945909 945908 945906 945912, overlap 945912 CTTCCTAAAATAAAA GAGTGAAGAGA GAAC TCTCTTCATTC CTCTTTATGAATCAA TERM 971 945912 - 945931 + T 79 -9.4 -3.50737 | opp_overlap 945909 945912, overlap 945909 945908 945906 CCTAAAATAAAAGAG TGAAGAGA GAAC TCTCTTCA TTCCTCTTTATGAAT TERM 972 945931 - 945912 - T 74 -9.4 -3.08754 | opp_overlap 945912 945909 945908 945906, overlap 945909 CCTAAAATAAAAGAG TGAAGAGA GAAC TCTCTTCA TTCCTCTTTATGAAT CP0877 947435 - 945969 - | serine protease TERM 973 946067 - 946085 + g 73 -2.5 -5.10064 | gap 1, overlap 946067 946069 TTAACGTTCTATTCA G-ATCTTC AATC GAAGATAC TTTTTGTCTATTCAC CP0878 948750 - 947719 - | hypothetical protein CP0879 950041 - 949010 - | hypothetical protein CP0880 951330 - 950227 - | hypothetical protein TERM 974 950304 - 950292 - G 75 -3.3 -5.18371 | TGGTATAAAATAAAA CTTGG TTA CCACG CATAGTGAATGAGCT TERM 975 951270 - 951283 + g 74 -9.5 -3.28219 | overlap 951268 ACCAACGGTCTAATG CCGCC ATCA GGCGG TGTTCTGGTGAAGTT TERM 976 951370 - 951396 + r 74 -6.8 -4.39226 | opp_overlap 951361 951352 951369 951367 951370, overlap 951355 951367 TTAAAGTGCAAACAG TTTACATTTTAA TTA TTAAAAAGTAAA TTATTTTATAATTAT CP0881 951545 - 951408 - | hypothetical protein CP0882 952269 - 951775 - | hypothetical protein TERM 977 952023 - 952003 - G 78 -4 -5.1861 | overlap 952014 TGGAGGATTAAAAAA GTGCGT GAGAAGTAA ACGCAC AAGGTTTCGTTTACC CP0883 952512 - 952378 - | hypothetical protein CP0884 952941 - 952807 - | hypothetical protein CP0885 953871 - 952990 - | succinyl-CoA synthetase subunit alpha sucC 955045 - 953885 - | succinyl-CoA synthetase subunit beta CP0887 955116 - 955988 + | signal recognition particle protein FtsY CP0888 956713 - 955997 - | hypothetical protein TERM 978 956036 - 956026 - G 70 -5.4 -4.55023 | CTGAAGATGAGAAAA TCTG CAG CAGA TACCAAAATACCATG TERM 979 956589 - 956571 - G 71 -2.4 -5.098 | overlap 956572 CAAAAAGAAAATAAA CTTCTGTA TAA TCCAGAAA AATAAAGACCCAGGG CP0889 957954 - 956764 - | Mtr/TnaB/TyrO permease family protein TERM 980 957811 - 957801 - G 75 -8.2 -3.85389 | CTTCAAGAAGGCAAA GGCC TGA GGCC ATAGAAAAAAGCCAG TERM 981 957872 - 957860 - G 87 -6.2 -5.08824 | GTTGCAGGGAAAAAA CCGC CTTTT GCGG TCAATACAGGAACTG TERM 982 958067 - 958016 - R 75 -9.6 -2.66435 | opp_overlap 958015 AGTTTCATCATAGGA TTGCGAGGTCTACTACTGTGAAGT ACTT ACTCTACAGTAACAGACTTGGCAA GATTTCTGGGACAGT CP0890 958362 - 958042 - | hypothetical protein TERM 983 958238 - 958220 - G 71 -2.4 -5.098 | overlap 958221 CAAAAAGAAAATAAA CTTCTGTA TAA TCCAGAAA AATAAAGACCCAGGG CP0891 959603 - 958413 - | Mtr/TnaB/TyrO permease family protein TERM 984 959460 - 959450 - G 75 -8.2 -3.85389 | CTTCAAGAAGGCAAA GGCC TGA GGCC ATAGAAAAAAGCCAG TERM 985 959521 - 959509 - G 87 -6.2 -5.08824 | GTTGCAGGGAAAAAA CCGC CTTTT GCGG TCAATACAGGAACTG TERM 986 959716 - 959665 - R 75 -9.6 -2.66435 | opp_overlap 959664 AGTTTCATCATAGGA TTGCGAGGTCTACTACTGTGAAGT ACTT ACTCTACAGTAACAGACTTGGCAA GATTTCTGGGACAGT CP0892 961520 - 959691 - | D-fructose-6-phosphate amidotransferase TERM 987 960297 - 960284 - G 71 -6.7 -4.10257 | AACCCAAAAACACAA GCAAC AAGA GTTGC GAGGTAAAAGCCTTT CP0893 962903 - 961527 - | phosphoglucomutase/phosphomannomutase family protein TERM 988 964366 - 964384 + G 70 -7.6 -3.73072 | TGTCTTTGACATCCG TTTTTGAT TAT ATCAAAAA TTTCCTAGAACAATT CP0894 963378 - 964670 + | poly(A) polymerase family protein lpxB 964679 - 966493 + | lipid-A-disaccharide synthase TERM 989 966528 - 966516 - f 71 -6.3 -4.17048 | GGTTTCTTAAAACAA GTTCT TTA AGAAC TCATAAATAAGTATA TERM 990 966609 - 966591 - f 72 -2.5 -5.27938 | ATTTCTAAATAAAAA TTAATTG AATAA CAATCAA TCTTAGAAAGTATAA TERM 991 966795 - 966779 - g 77 -6.5 -4.63932 | overlap 966780 966790 TATCTTGGAAGAAAA TGCGTGT CAA ACACGCC TAACCAACGTGGCTC TERM 992 966794 - 966780 - g 76 -10 -3.37877 | overlap 966779 966790 ATCTTGGAAGAAAAT GCGTGT CAA ACACGC CTAACCAACGTGGCT TERM 993 967073 - 967085 + G 72 -7.7 -3.81256 | overlap 967079 TCAACCCTTCATTTT CGCTT TGC AAGCG TTGCTTTTTGAGGAT TERM 994 967079 - 967089 + G 73 -5.4 -4.59773 | overlap 967073 CTTCATTTTCGCTTT GCAA GCG TTGC TTTTTGAGGATAACA CP0896 966657 - 968117 + | hypothetical protein TERM 995 968156 - 968138 - T 100 -11.8 -5.7827 | opp_overlap 968138 AAGAGAAATAAAAAA GGGTTACT AAA AGTAACCC TTTTTTTTGATTGAA TERM 996 968138 - 968156 + T 100 -11.8 -5.95166 | opp_overlap 968138 AAGAGAAATAAAAAA GGGTTACT AAA AGTAACCC TTTTTTTTGATTGAA CP0897 973017 - 968188 - | polymorphic membrane protein D family protein CP0898 974099 - 973137 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 997 974068 - 974051 - G 76 -7.7 -4.08557 | CTTGCCAAACAACAA GAGGAGA ATGG TCCCCTC CCATTAAATCTATGC rpmF 974297 - 974115 - | 50S ribosomal protein L32 CP0900 974651 - 974310 - | hypothetical protein TERM 998 975523 - 975537 + G 84 -10 -3.86822 | opp_overlap 975522 975521 975525 TACTTTTACCAAACT CACCTC ACC GAGGTG TTTCTCGAAAAATTG CP0901 975072 - 976619 + | ribonuclease G TERM 999 976693 - 976705 + G 77 -6.3 -4.73388 | overlap 976701 CCAGAGCCTTTATAT CAGAA ATT TTCTG TTTTTCATCAGAATT CP0902 976630 - 977625 + | glycerol-3-phosphate acyltransferase, putative TERM 1000 978128 - 978118 - g 73 -5.4 -4.60797 | TCTTGATAGAGAAAA GTAC GCA GTAC ATCAAGAATTCGCTG TERM 1001 978847 - 978863 + G 78 -9.5 -3.59946 | AAGTCCATTGTTTGA TCTGCTT TGT AAGCAGA TTGTATCCTTGGGCA CP0903 977627 - 980455 + | insulinase family metalloprotease TERM 1002 980454 - 980494 + T 100 -18.7 -3.63425 | opp_overlap 980459 980463, overlap 980459 980463 CTCAGAAGACCTCTT AAAAACAAAGGCATAAGAT CAT ATCTTATGCCTTTGTTTTA TCTTTAGTTTACCTG TERM 1003 980489 - 980459 - T 100 -18.6 -4.59511 | opp_overlap 980454 980459 980463, overlap 980463 AAGACCTCTTAAAAA CAAAGGCATAAGAT CAT ATCTTATGCCTTTG TTTTATCTTTAGTTT TERM 1004 980459 - 980489 + T 100 -18.6 -4.85894 | opp_overlap 980459 980463, overlap 980454 980463 AAGACCTCTTAAAAA CAAAGGCATAAGAT CAT ATCTTATGCCTTTG TTTTATCTTTAGTTT TERM 1005 980485 - 980463 - T 100 -13.6 -4.85782 | opp_overlap 980459 980454 980463, overlap 980459 CCTCTTAAAAACAAA GGCATAAGAT CAT ATCTTATGCC TTTGTTTTATCTTTA TERM 1006 980463 - 980485 + T 100 -13.6 -4.91778 | opp_overlap 980463 980459, overlap 980459 980454 CCTCTTAAAAACAAA GGCATAAGAT CAT ATCTTATGCC TTTGTTTTATCTTTA CP0904 981855 - 980503 - | hypothetical protein TERM 1007 982043 - 982030 - R 87 -2.4 -6.09196 | TTTAAAATAAAAAAA TCCT TTAAGT AGGA AGAGAATGTGAGGGT TERM 1008 982506 - 982524 + r 88 -7.5 -4.89339 | TATTTTTCAAGTCTG TCCGTAT ACGAA ATACGGA TTTTTCTAGATCATT TERM 1009 982745 - 982732 - R 95 -2.4 -6.59152 | overlap 982733 TGAAGAAAAAAAAAA GGAA CATCGC TTCC GATTTCTCGAGCCCA rplI 983673 - 983164 - | 50S ribosomal protein L9 TERM 1010 983228 - 983262 + g 79 -7.9 -4.29139 | ACGTATTCATTGTCA GAGGTAACTTCGACC AATAA GGTTGCGGTTACTTC TTCTTTTAGCTTTAA TERM 1011 983535 - 983562 + g 82 -3.4 -5.45652 | gap 1, opp_overlap 983535 983534 GTTTAGCTTGTAAAC GCAGAG-TTCCTG CAC CAGCAATCACTGC TTTTTTCTTAGGGAT rpsR 983937 - 983689 - | 30S ribosomal protein S18 rpsF 984293 - 983955 - | 30S ribosomal protein S6 CP0909 984927 - 984385 - | peptidyl-tRNA hydrolase TERM 1012 984781 - 984767 - G 73 -8.6 -3.6279 | opp_overlap 984769 AAAGGCCCTGAAGAA GACTCT ACG AGAGTC ATTAAAGCATGGCAT CP0910 985486 - 984929 - | 50S ribosomal protein L25/general stress protein Ctc TERM 1013 986277 - 986290 + G 70 -8.1 -3.65812 | overlap 986272 TTCTCTGCTTTTGCA GCTGC AGCT GCAGC TTATCTTCAAGAAGC TERM 1014 987258 - 987273 + G 80 -9 -3.98173 | GCTGTAACGACGTAT CGTCAG GAGC CTGACG TTTGGTTGAATTTGA glgA 985941 - 987371 + | glycogen synthase TERM 1015 987370 - 987385 + T 71 -3.3 -5.11836 | AATCTTTACTCTCAT GATTC TTTTCT GAATC TTTTGTTTTAGCTCT CP0912 987973 - 987353 - | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CP0913 988641 - 991673 + | glycyl-tRNA synthetase, tetrameric type, alpha/beta subunits TERM 1016 991694 - 991729 + T 100 -22.8 -4.63218 | opp_overlap 991694 991698, overlap 991698 991725 TAACATTTAGATAAA GAAAGCGCTCGTGGGA GGAA TCCTACGAGCGCTTTC TTTTATTAAGGGAAG TERM 1017 991729 - 991694 - T 100 -20.6 -4.08939 | opp_overlap 991694 991698 991725, overlap 991698 TAACATTTAGATAAA GAAAGCGCTCGTGGGA GGAA TCCTACGAGCGCTTTC TTTTATTAAGGGAAG TERM 1018 991698 - 991725 + T 100 -17.8 -4.87892 | opp_overlap 991694 991698, overlap 991694 ATTTAGATAAAGAAA GCGCTCGTGGGA GGAA TCCTACGAGCGC TTTCTTTTATTAAGG TERM 1019 991725 - 991698 - T 100 -15.6 -4.63044 | opp_overlap 991698 991694, overlap 991694 ATTTAGATAAAGAAA GCGCTCGTGGGA GGAA TCCTACGAGCGC TTTCTTTTATTAAGG CP0914 992345 - 991752 - | hypothetical protein CP0915 992903 - 992415 - | hypothetical protein CP0916 993171 - 993049 - | hypothetical protein CP0917 993437 - 993174 - | hypothetical protein CP0918 993601 - 993497 - | hypothetical protein TERM 1020 993649 - 993635 - R 72 -5.8 -4.36508 | TTAGAAAAACAAGAA TTCTTT ACA AAAGAA GAGCTGGGTTAAGGA dnaG 995442 - 993658 - | DNA primase TERM 1021 994072 - 994062 - G 79 -3.2 -5.28176 | TGGATCCACAAAAAA GCAT ACA ACGC AAGATATCTGTTTCC TERM 1022 994802 - 994789 - G 70 -5.3 -4.57569 | GGAGTTTTCTAAAAA TTTCC TAGC GGAAA ATCCAATGGTATGTC TERM 1023 994884 - 994896 + g 74 -7.7 -4.03219 | opp_overlap 994883 994884 TATTCCCAAAAAACC CTGCA GTA TGCAG TTGTTCTTGTGAGAT TERM 1024 996225 - 996209 - g 89 -3.5 -5.62219 | opp_overlap 996213, overlap 996210 AAGAGAGTAAAAAAA TCGGTCC CAT GGCCCGG GATATTCAGAGATTT TERM 1025 996971 - 996953 - g 73 -5.3 -4.64361 | opp_overlap 996953 GAAAAAATATCAAAA CGTACCT TTGTC AAGTACG TGATATCGAACGACT TERM 1026 998207 - 998218 + G 78 -5.8 -4.84311 | opp_overlap 998206 998207 GAGTTAAAGATAAAG CAGG GCAG CCTG TTTTCTTATATGAGA TERM 1027 998275 - 998289 + G 70 -7.1 -3.75418 | TTCGGCATTCATGTC GCCAG GCTTG CTGGC TTTCCCCTTTGTGTG CP0920 995914 - 998400 + | DNA mismatch repair protein uvrC 998403 - 1000214 + | excinuclease ABC subunit C CP0922 1000687 - 1000217 - | hypothetical protein CP0923 1001093 - 1001569 + | hypothetical protein rpsN 1001919 - 1001614 - | 30S ribosomal protein S14 rpmJ 1002079 - 1001942 - | 50S ribosomal protein L36 rpmH 1002324 - 1002461 + | 50S ribosomal protein L34 CP0928 1003880 - 1002834 - | hypothetical protein rnpA 1002473 - 1002892 + | ribonuclease P TERM 1028 1003726 - 1003691 - Gf 82 -4.8 -5.37345 | gap 1, opp_overlap 1003695 1003697, overlap 1003694 1003697 CGGAACCAGAAAAAA TAACAAGCAAAGGAAGC TCT GCTTCC-TTGCTCTTTT GCAAAGCCTCCTGAT TERM 1029 1003723 - 1003694 - Gf 80 -6.5 -4.75967 | gap 1, opp_overlap 1003695 1003697, overlap 1003691 1003697 AACCAGAAAAAATAA CAAGCAAAGGAAGC TCT GCTTCC-TTGCTCT TTTGCAAAGCCTCCT TERM 1030 1003695 - 1003722 + gF 76 -7.8 -4.08216 | gap 1, opp_overlap 1003694 1003691 1003697, overlap 1003697 ACCAGAAAAAATAAC AAGCAAAGGAAGC TCT GCTTCC-TTGCTC TTTTGCAAAGCCTCC TERM 1031 1003697 - 1003720 + gF 86 -10.4 -3.63922 | gap 1, opp_overlap 1003694 1003691 1003697, overlap 1003695 CAGAAAAAATAACAA GCAAAGGAAGC TCT GCTTCC-TTGC TCTTTTGCAAAGCCT TERM 1032 1003720 - 1003697 - Gf 100 -10.4 -4.44307 | gap 1, opp_overlap 1003697 1003695, overlap 1003694 1003691 CAGAAAAAATAACAA GCAAAGGAAGC TCT GCTTCC-TTGC TCTTTTGCAAAGCCT CP0929 1003942 - 1004067 + | hypothetical protein CP0930 1004064 - 1004201 + | hypothetical protein TERM 1033 1004262 - 1004248 - f 76 -6.4 -4.55093 | opp_overlap 1004251 CTATATAACAACAAA CTCCTG AGT CAAGAG TGATACAGTTATGGC cysS 1004273 - 1005697 + | cysteinyl-tRNA synthetase lysS 1007277 - 1005694 - | lysyl-tRNA synthetase TERM 1034 1006504 - 1006514 + g 73 -5.4 -4.63218 | opp_overlap 1006494 1006496 1006491 AATACGAGGAGCTCC TCCT ACT AGGA TTTTCTTCAAAGCGA CP0933 1007559 - 1007419 - | hypothetical protein CP0934 1007806 - 1007684 - | hypothetical protein TERM 1035 1007851 - 1007833 - R 73 -9 -3.26719 | overlap 1007836 CGGACAAAGACTTAA GAATGTTT GAA AAACATTC CCGTATAGCCAGAAG CP0935 1008558 - 1008082 - | hypothetical protein TERM 1036 1008995 - 1008976 - g 87 -6.4 -5.09762 | overlap 1008978 TGGCAATAAAGAAAA GACCACAA ACTT TTGTGGAC AGACATTGAAGCCTG TERM 1037 1008993 - 1008978 - g 76 -7.6 -4.16668 | overlap 1008976 GCAATAAAGAAAAGA CCACAA ACTT TTGTGG ACAGACATTGAAGCC CP0936 1008956 - 1009093 + | hypothetical protein TERM 1038 1009625 - 1009644 + G 79 -10.8 -3.14211 | opp_overlap 1009616, overlap 1009624 AGGAGATCTTTGATT CTTGGCAA AGAT TTGCCAAG TTGATAGGGGCCAAT TERM 1039 1010203 - 1010189 - g 82 -8.6 -4.3586 | overlap 1010192 1010194 CCATCGACAGCAAAA CAAGAG TGG CTCTTG CCACACCAATTTTGA TERM 1040 1010209 - 1010192 - g 74 -6.9 -4.29302 | overlap 1010189 1010194 TCGACAGCAAAACAA GAGTGGC TCTT GCCACAC CAATTTTGAAAAAGC TERM 1041 1010207 - 1010194 - g 72 -8.1 -3.74088 | overlap 1010189 1010192 GACAGCAAAACAAGA GTGGC TCTT GCCAC ACCAATTTTGAAAAA CP0937 1009123 - 1010232 + | hypothetical protein CP0938 1010434 - 1011534 + | hypothetical protein TERM 1042 1012578 - 1012568 - g 75 -5.4 -4.78848 | overlap 1012570 CTTCGAAAGAGAAAA TTGC GTA GCAA CACCTTTTCTAGAGC CP0939 1011606 - 1012748 + | hypothetical protein CP0940 1013355 - 1012855 - | hypothetical protein TERM 1043 1013447 - 1013430 - H 71 -5.7 -4.4767 | opp_overlap 1013433 TGATTTAGGATAAAA TAAGAAT AGAA ATTCTTA TCCACAGAGAGCTCT CP0941 1013515 - 1014192 + | hypothetical protein CP0943 1017431 - 1016319 - | 8-amino-7-oxononanoate synthase CP0942 1014141 - 1016390 + | primosome assembly protein PriA TERM 1044 1017297 - 1017285 - GT 72 -9.1 -2.64218 | opp_overlap 1017292 1017293, overlap 1017284 1017292 1017293 AGGCCCTACCATAAG CCGAG AAC CTCGG ATCCCGAGCTTCTCA TERM 1045 1017293 - 1017305 + gT 72 -9.1 -2.64099 | opp_overlap 1017285 1017284 1017292 1017293, overlap 1017292 CCATAAGCCGAGAAC CTCGG ATC CCGAG CTTCTCATGAGGAAA TERM 1046 1017305 - 1017293 - GT 72 -9.1 -2.62653 | opp_overlap 1017293 1017292, overlap 1017285 1017284 1017292 CCATAAGCCGAGAAC CTCGG ATC CCGAG CTTCTCATGAGGAAA CP0944 1019101 - 1017485 - | long chain fatty acid--[acyl-carrier-protein] ligase TERM 1047 1017843 - 1017824 - G 71 -5 -4.58395 | CCTACCTTCTAAAAA TAGATCCC CGCT AGGACCTA TATGACCCAAATCTC CP0945 1019880 - 1019119 - | hypothetical protein CP0946 1020010 - 1020987 + | 3'(2'),5'-bisphosphate nucleotidase CP0947 1022037 - 1020982 - | Glu/Leu/Phe/Val dehydrogenase family protein TERM 1048 1021390 - 1021415 + g 70 -7.5 -3.86897 | opp_overlap 1021392 AATCGTAGCCCCATA GAGCCTTGCAG CATC CTGAACGGCTC TTTCTAAAACATCAG TERM 1049 1022520 - 1022506 - g 84 -2.8 -5.71712 | opp_overlap 1022506, overlap 1022508 TCTTACAGAAAAAAA TATCCA TCA TGGAAA TATTTTACTTCAAGC TERM 1050 1022518 - 1022508 - g 70 -5.4 -4.50122 | opp_overlap 1022506, overlap 1022506 TTACAGAAAAAAATA TCCA TCA TGGA AATATTTTACTTCAA CP0948 1022192 - 1022839 + | inorganic pyrophosphatase TERM 1051 1022876 - 1022836 - T 87 -11.3 -3.17392 | opp_overlap 1022850, overlap 1022840 CACTGCTGAAGTGAA TTAATGTCTAAGGAGAGGG GTT CCCTCTCCTTGAAAATCAA GAAGAGAAAAGATAG TERM 1052 1022871 - 1022840 - T 87 -11 -3.4052 | gap 1, opp_overlap 1022850, overlap 1022836 GCTGAAGTGAATTAA TGTCTAAGGAGAGGG GTT CCCTCTCCTT-GAAA ATCAAGAAGAGAAAA TERM 1053 1022850 - 1022862 + T 72 -9.1 -2.72344 | opp_overlap 1022840 1022836 ATTAATGTCTAAGGA GAGGG GTT CCCTC TCCTTGAAAATCAAG CP0949 1023325 - 1022873 - | MutT/Nudix family protein CP0950 1024578 - 1023328 - | 3-oxoacyl-(acyl carrier protein) synthase II CP0951 1024954 - 1024595 - | iojap-related protein TERM 1054 1024881 - 1024861 - G 70 -7.7 -3.63968 | overlap 1024872 CGGTAAATTCCGAAA TTGTTCTAA CAT CTAGAACAA CCAGATTATTCCCTT CP0952 1025416 - 1025015 - | hypothetical protein CP0953 1025655 - 1025467 - | hypothetical protein CP0954 1027313 - 1025652 - | hypothetical protein TERM 1055 1027960 - 1027943 - g 95 -5.5 -5.75342 | overlap 1027945 TCTCTCCAAAAAAAA TGCAGCC TGGG GGCTGGA TCAATCTACATAAGT TERM 1056 1027992 - 1027978 - g 71 -10 -2.63823 | opp_overlap 1027978, overlap 1027974 AATCTACATAAGTTA GCCCAT CTC ATGGGC TTTCGCACAACAGCA TERM 1057 1027978 - 1027992 + G 78 -10 -3.53012 | opp_overlap 1027978 1027974 AATCTACATAAGTTA GCCCAT CTC ATGGGC TTTCGCACAACAGCA CP0955 1027399 - 1028460 + | hypothetical protein miaA 1029463 - 1028435 - | tRNA delta(2)-isopentenylpyrophosphate transferase CP0957 1029805 - 1029473 - | anti-anti-sigma factor TERM 1058 1030341 - 1030357 + G 82 -2.3 -5.71712 | ACCGTACTTCCCCTC TCTGA ATCTCCC TCAGA TTTTTTTCTCTCAAG CP0958 1029880 - 1030665 + | hypothetical protein CP0959 1030662 - 1031000 + | periplasmic divalent cation tolerance protein CutA1 TERM 1059 1031053 - 1031064 + F 93 -3 -6.04953 | opp_overlap 1031053 CAGGAACTTTAAAAA CATA GAGT TATG TTTTTTTCTTTCTAT CP0960 1031102 - 1031530 + | hypothetical protein TERM 1060 1031568 - 1031595 + T 100 -7.9 -5.94214 | opp_overlap 1031568 GTTTACATGTAAAAA CTAGAGATTTT AATAAA AAGATCTCTAG TTTTTTTATTATCTT TERM 1061 1031595 - 1031568 - T 74 -5.7 -4.70659 | opp_overlap 1031568 GTTTACATGTAAAAA CTAGAGATTTT AATAAA AAGATCTCTAG TTTTTTTATTATCTT CP0961 1034033 - 1031604 - | UDP-N-acetylmuramate--alanine ligase/D-alanine--D-alanine ligase TERM 1062 1032774 - 1032790 + g 71 -9.5 -2.91264 | AATGCGAATGTAGTT TCGTAGA TAA TCTACGA TGTCTCCATGGGGAA TERM 1063 1033010 - 1032992 - G 78 -7.4 -4.57073 | GATGTGGTTGAAAAA TTGCGATG ACT CTTCGCAA ACCCACAGCATCACG TERM 1064 1034066 - 1034049 - R 75 -8.5 -3.45536 | ATAATGAACCTATAA GCATTCA CAAA TGAATGC ATGGAATGTTTTTGT murG 1035116 - 1034043 - | N-acetylglucosaminyl transferase CP0963 1036179 - 1035022 - | cell division protein FtsW CP0964 1036899 - 1036198 - | hypothetical protein murD 1038155 - 1036902 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase mraY 1039207 - 1038158 - | phospho-N-acetylmuramoyl-pentapeptide-transferase CP0967 1040567 - 1039224 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 1065 1039856 - 1039846 - G 85 -4 -5.45802 | TCGTTAAAAGAAAAA GAAA ATT TTTC GGCAGTAGGAGAACA TERM 1066 1041779 - 1041762 - g 79 -8.5 -4.15044 | CTTGTTGTTAACAAA TTGCAAG GGCT CTTGCAA GTAACTGTAGTCACC CP0968 1040982 - 1042541 + | 60 kDa chaperonin, putative CP0969 1042705 - 1043592 + | hypothetical protein CP0970 1043838 - 1043617 - | hypothetical protein TERM 1067 1043735 - 1043749 + g 70 -5.7 -4.25256 | opp_overlap 1043724 1043734, overlap 1043724 ACAAGCTTAGCAACC CAAGC TTTGC GCTTG TTCTTTTCATCAAGA TERM 1068 1043868 - 1043857 - R 71 -3 -5.05782 | ACGCACTGTAAAAAA GAAA TACT TTTC CTACAACGGCAATCT CP0971 1044454 - 1043882 - | elongation factor P TERM 1069 1045245 - 1045255 + G 73 -5.4 -4.7254 | opp_overlap 1045245 ATCCGCTGAAATGGA GTGT GCG ACAC TTTTTGCTGCCGGAT CP0972 1044676 - 1045557 + | AMP nucleosidase CP0973 1047548 - 1045551 - | transketolase TERM 1070 1048073 - 1048118 + GH 70 -5.6 -4.38876 | gap 2, opp_overlap 1048087 GGAATTTTTCTTTCG GAGACTACTTTAAAGCAGAGGC GATT GCCTTTGC-TT-GGGAAGTCTC TTTATCTGTTTTTAA TERM 1071 1048106 - 1048087 - gH 71 -7.8 -3.63068 | opp_overlap 1048073 GGAGACTACTTTAAA GCAGAGGC GATT GCCTTTGC TTGGGAAGTCTCTTT TERM 1072 1050029 - 1050017 - gH 73 -7.7 -3.82519 | overlap 1050015 ATGAGTTAGAAAACA GTCTG ATT CAGAC AAAATTAGACAAGTT TERM 1073 1050189 - 1050167 - gH 81 -9.3 -3.88001 | TTCCAGAAAAACTAA TTTCTCTGT GGACA ACAGAGAAA AATGGGAAATATATT alaS 1047781 - 1050399 + | alanyl-tRNA synthetase TERM 1074 1051640 - 1051662 + GF 78 -4.3 -5.10208 | gap 1, opp_overlap 1051633, overlap 1051641 AAAACAACGCACTCA CTT-TTCAGT GACT ACTGAAGAAG TTTTTGTTCCGATTC TERM 1075 1052339 - 1052328 - gf 70 -4.4 -4.70879 | GCCAAAGTGCAAAAA CTCA TCTG TGAG CAAGTAGCTTCAGGA TERM 1076 1053024 - 1053043 + GF 80 -9.3 -3.64703 | opp_overlap 1053036 AGGTTGTCTGGGCCA GCAGCGA AGCGAC TCGCTGC TTTAAATAAGCAGGA TERM 1077 1053199 - 1053189 - gf 100 -6.8 -5.5943 | opp_overlap 1053189 AAATTACTAAAAAAA GCTG TTT CAGC TTTAAAAAAACACAC CP0975 1050369 - 1053626 + | transcription-repair coupling factor TERM 1078 1053857 - 1053869 + G 79 -7.7 -4.35116 | overlap 1053856 TTGCTGATATCCTAT CCATC TTG GATGG TTTTGCTGTGACCTA TERM 1079 1054198 - 1054210 + G 100 -9.1 -4.74706 | opp_overlap 1054188, overlap 1054189 ATGGATGCAGGAGCT GCTGC TGT GCAGC TTTTTGAATCTTCGA hemE 1053637 - 1054626 + | uroporphyrinogen decarboxylase CP0977 1054607 - 1055983 + | coproporphyrinogen III oxidase TERM 1080 1056141 - 1056121 - g 86 -9.7 -4.03234 | opp_overlap 1056124, overlap 1056124 CTTGTTTTAGATAAA GAAGCCTAC GCA GGAGGCTTC GTCCGCACGGAATCC TERM 1081 1056884 - 1056900 + G 79 -8 -4.27316 | CTAGCATCAGCTTAG GTTGGC ATCAC GCCAAC TTTTCGCTTCCCAAA CP0978 1056019 - 1057326 + | protoporphyrinogen oxidase CP0979 1059750 - 1057282 - | hypothetical protein TERM 1082 1058707 - 1058695 - G 82 -4.8 -5.28176 | TGCACCTAGAAAAAA CCCA TATTC TGGG AAATAGGGATGCTCA TERM 1083 1059093 - 1059107 + g 78 -2.2 -5.56264 | overlap 1059093 1059094 GCAAAGCAAGCAGTG TTTTTT GCA AAAAAG TTTTTTCTATTTGCA TERM 1084 1059298 - 1059285 - G 79 -6.7 -4.64766 | opp_overlap 1059293, overlap 1059293 TGTAGAGCTCAAAAA GCAAG TGAT CTTGC AAAGATTCGTGACAG TERM 1085 1060225 - 1060199 - g 75 -5.8 -4.59251 | opp_overlap 1060199, overlap 1060201 GCAAAAAAAATGAAA GACCTGCTGGAT AGC ATCCAACACGAC TTAGCTAAAGCAGAG TERM 1086 1060461 - 1060422 - g 84 -3.7 -5.41746 | AAGCCCCTAAAAAAA GCTCTG-CTGCTGCAGCTA AAAC TAGC-AAAGCAGTCAAAGC TTCTAAACCTGCATC CP0980 1060166 - 1060537 + | histone H1-like protein HC1 TERM 1087 1060562 - 1060589 + F 95 -8.5 -5.24129 | GCTTGATTTCGTTTA GAGGGTGGGTA ATTTTC TACTCATCCTC TTTTTTATGCCCAAA TERM 1088 1060906 - 1060896 - g 79 -3.2 -5.27335 | overlap 1060897 CTCCTTAAAGAAAAA GGAA GAA CTCC TTCATCAGTTATTCG CP0981 1060807 - 1062012 + | RNA methyltransferase yajC 1062083 - 1062436 + | preprotein translocase subunit YajC TERM 1089 1062459 - 1062480 + F 100 -13.1 -4.69324 | CTTTTGAGACTTTCA TCCCACGAT TAAA ATCGTGGGA TTTCTTATTTATTGT CP0983 1062577 - 1063872 + | Na(+)-translocating NADH-quinone reductase subunit F CP0984 1064931 - 1064035 - | hypothetical protein CP0986 1065775 - 1065230 - | hypothetical protein CP0985 1065045 - 1065392 + | hypothetical protein TERM 1090 1065871 - 1065891 + FH 81 -8.4 -4.24123 | opp_overlap 1065871 AACAGCAAAAAAAAA GAGGATAA AAAAA TTATCCTC TTTTGAAATTCTTAA TERM 1091 1065891 - 1065871 - fH 100 -8.4 -6.21477 | opp_overlap 1065871 AACAGCAAAAAAAAA GAGGATAA AAAAA TTATCCTC TTTTGAAATTCTTAA CP0987 1066555 - 1067205 + | hypothetical protein TERM 1092 1068570 - 1068582 + F 78 -7.7 -4.2354 | AGGTTCTATTTCACT CCCTT AAC AAGGG TTCTTTTCACCTTTC TERM 1093 1068812 - 1068828 + F 73 -8.1 -3.66803 | opp_overlap 1068811 ATCGACCCTACAACC CCATATT AAA AATATGG TTTAGGCTGTTCCCC TERM 1094 1068971 - 1068953 - f 79 -10.4 -2.81207 | overlap 1068952 1068955 TATTCAACATATAAT GATAGACT ATT AGTCTATC GGGTTGCCCCATTCG TERM 1095 1069298 - 1069314 + G 76 -9.5 -3.5002 | overlap 1069285 1069294 TGCCCAACCTAGTCG GGTTGTT AAA AACAACC TTCCTTGTCCTTAAA CP0988 1069264 - 1069422 + | hypothetical protein TERM 1096 1071626 - 1071648 + G 73 -5.6 -4.56642 | overlap 1071627 CCTCGTCTTCCGACT TTGCCTTTAG CAG CTAAAGCCAG TTTATATTTATTTTT TERM 1097 1071926 - 1071942 + G 73 -7.3 -4.20516 | TCCATGTTATCTCCA GTAGGAA CGC TTCCTGC TTTATTAGATACACG TERM 1098 1072168 - 1072188 + G 71 -3.3 -5.03145 | overlap 1072171 AACCTTTCAAGACGG GGTCAAAAA GGC TTTTTGCTC TTTTTTCCAAACTTG TERM 1099 1072859 - 1072884 + G 72 -6.1 -4.26344 | overlap 1072879 ATTCCGGGGAAAGCT GCTGTGGGTAT TGAA ATTCCCACACC TTTTCCTCAAGCTGT CP0989 1071581 - 1074001 + | cell division protein FtsK, putative TERM 1100 1074366 - 1074382 + G 76 -2.9 -5.34655 | AATGTACCTCATGAT GCTGTAG ATC CTGTGGC TTTTATTTTTCATTA CP0990 1074003 - 1074800 + | hypothetical protein CP0991 1074788 - 1075453 + | hypothetical protein TERM 1101 1075430 - 1075457 + T 87 -13 -2.81535 | opp_overlap 1075433, overlap 1075427 1075433 AGGAAGAAGCGAGAG GAATTTATTCCT GAAG AGGAATAAATTC TAACTTTTCTCGTAA TERM 1102 1075433 - 1075454 + T 77 -8.9 -3.543 | opp_overlap 1075433, overlap 1075430 1075427 AAGAAGCGAGAGGAA TTTATTCCT GAAG AGGAATAAA TTCTAACTTTTCTCG TERM 1103 1075454 - 1075433 - T 73 -8.9 -3.30854 | opp_overlap 1075430 1075427 1075433 AAGAAGCGAGAGGAA TTTATTCCT GAAG AGGAATAAA TTCTAACTTTTCTCG CP0992 1075909 - 1075457 - | hypothetical protein CP0993 1077298 - 1075922 - | sodium/alanine symporter family protein TERM 1104 1076071 - 1076061 - G 71 -3.2 -4.95758 | ACCATACCAGAAAAA CCTG TGT CAGA TAAGGCCCAAATCAT TERM 1105 1077182 - 1077164 - G 78 -10.4 -3.27476 | ATTTTGAAGCATCAA GTTAAAGC CGA GCTTTAAC CCGTGGAACTGTAAA TERM 1106 1077399 - 1077352 - R 71 -3.3 -5.19879 | opp_overlap 1077355 1077359, overlap 1077333 1077354 GGCCAAAGAGAAAAA CTTCTGGGCTTCCCTTCCCTA TTGTTT TGGGGAAAGGAAGCTTAGTTG TAGAGAGCTTTAGAA TERM 1107 1077355 - 1077396 + r 91 -12.4 -3.30635 | opp_overlap 1077333 1077354 1077352, overlap 1077359 CAAAGAGAAAAACTT CTGGGCTTCCCTTCCCTA TTGTTT TGGGGAAAGGAAGCTTAG TTGTAGAGAGCTTTA TERM 1108 1077359 - 1077392 + r 90 -11.8 -3.44146 | opp_overlap 1077333 1077354 1077352, overlap 1077355 GAGAAAAACTTCTGG GCTTCCCTTCCCTA TTGTTT TGGGGAAAGGAAGC TTAGTTGTAGAGAGC CP0994 1078070 - 1077417 - | hypothetical protein CP0995 1078335 - 1079696 + | hypothetical protein TERM 1109 1079725 - 1079705 - T 95 -14.1 -3.29325 | opp_overlap 1079702 1079699 1079698, overlap 1079703 TCTGTAGAAGGAAGA GTCCCACAA ATT TTGTGGGAC GTATACGTTCTTACA ribH 1080209 - 1079745 - | riboflavin synthase subunit beta TERM 1110 1080119 - 1080100 - G 73 -2.8 -5.12707 | opp_overlap 1080118, overlap 1080102 CCAAACTTCAAAAAA GTTTCCTG AGTA CCAGAAAC TAGGGCATCAGCCAT CP0997 1081479 - 1080223 - | bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein CP0998 1082670 - 1081540 - | riboflavin-specific deaminase CP0999 1082714 - 1083997 + | seryl-tRNA synthetase TERM 1111 1084144 - 1084154 + GF 71 -3.2 -5.00642 | opp_overlap 1084119 GGGAGCCCCATACAA CCTT TAA AGGG TTTTTCTATCACTTA CP1000 1084041 - 1084787 + | hypothetical protein TERM 1112 1085014 - 1085026 + GT 80 -2.7 -5.5112 | TCTCTCTAACTTATT TGTAG TAT TTACA TTTTTTCTTGCTGGC TERM 1113 1086628 - 1086612 - gT 70 -3.7 -4.88646 | AAAAAGCAAAACAAA CGAAAAA AGT TGTTTCG CAGAACCTTGCACTA CP1001 1084724 - 1086775 + | cation transporter E1-E2 family ATPase CP1002 1087911 - 1086772 - | cell shape-determining protein MrdB CP1003 1087951 - 1088529 + | biotin--protein ligase CP1004 1089024 - 1088497 - | hypothetical protein CP1005 1089772 - 1089065 - | ribosomal large subunit pseudouridine synthase B CP1006 1089928 - 1090614 + | phosphoglyceromutase CP1007 1090569 - 1091723 + | nifS protein, putative CP1008 1091720 - 1092520 + | nifU protein, putative TERM 1114 1093348 - 1093321 - g 95 -9.2 -4.53163 | overlap 1093316 1093324 CCATACATTAGAAAA TTACCTGGGGAA AATT TTCCCCAAGGAA CACTTTGCTCTTGCG TERM 1115 1093345 - 1093324 - g 79 -10.9 -3.21099 | overlap 1093316 1093321 TACATTAGAAAATTA CCTGGGGAA AATT TTCCCCAAG GAACACTTTGCTCTT TERM 1116 1093381 - 1093351 - g 100 -13.4 -3.23853 | overlap 1093349 TTTCCCCAAGGAACA CTTTGCTCTTGCGT ATC ACGCAAAAGCAGAG AAGCCCACATTACAG CP1009 1092812 - 1093837 + | type III secretion system protein CP1010 1093854 - 1094390 + | hypothetical protein CP1011 1094387 - 1095688 + | type III secretion system ATPase TERM 1117 1095932 - 1095945 + G 71 -6.7 -4.18488 | opp_overlap 1095925 1095932 TTTATAAACAACAGA GCGAA TCTC TTCGC TTTCTTGAAATCCAT CP1012 1095685 - 1096053 + | hypothetical protein TERM 1118 1096588 - 1096612 + G 95 -8 -5.24129 | gap 1 AATCCAACGACTACT TCCACCTAGAT CCAA ATC-AGGTGGA TTTTTTCTGCCAACC TERM 1119 1097225 - 1097203 - g 70 -7.8 -3.58343 | opp_overlap 1097203, overlap 1097223 GCGACCATTGTCAAA CTCTTGTGTA TCC TAGACAAGAG TGCTTTGCTCCCCTA CP1013 1096065 - 1097450 + | UDP-N-acetylglucosamine pyrophosphorylase, putative gpsA 1097447 - 1098451 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 1120 1099512 - 1099474 - g 73 -7.1 -4.23007 | gap 1, opp_overlap 1099467 1099486, overlap 1099467 1099478 CACAGAACTCGAAAA GCAATTT-ACGAATTTTA AATT TAAAATTCGTAAAATCAC AAACTTCGACAGAGT TERM 1121 1099507 - 1099478 - g 100 -12.5 -3.69437 | opp_overlap 1099467 1099486, overlap 1099467 1099474 GAACTCGAAAAGCAA TTTACGAATTTTA AATT TAAAATTCGTAAA ATCACAAACTTCGAC CP1015 1098605 - 1099639 + | major outer membrane protein, putative CP1016 1100805 - 1099636 - | hypothetical protein CP1017 1103126 - 1100826 - | hypothetical protein CP1018 1105046 - 1103244 - | phosphoenolpyruvate carboxykinase TERM 1122 1104129 - 1104117 - G 79 -3.4 -5.28683 | opp_overlap 1104117 AGCAACACCAAAAAA TCCA TATTC TGGA TTTACAGCATACAAC TERM 1123 1104198 - 1104212 + g 71 -8.6 -3.57263 | opp_overlap 1104197 CCCAATACACTCAAT CTTCCA ACC TGGAAG TTTAGGCATCAACAT TERM 1124 1104562 - 1104534 - G 71 -8.3 -3.43109 | overlap 1104543 CACACTATGTAAACA CTTTAAAAACTTC CCC GAAGTCCCTAAAG AACGTAAAACATCAT TERM 1125 1104553 - 1104543 - G 73 -5.4 -4.6856 | overlap 1104534 TAAACACTTTAAAAA CTTC CCC GAAG TCCCTAAAGAACGTA TERM 1126 1104735 - 1104725 - G 75 -5.4 -4.76041 | TACATCCACGAAAAA GTTG ATG CAAC TCCCTACGCATCTCT CP1019 1106149 - 1105049 - | cell shape-determining protein MreB CP1020 1109654 - 1106154 - | SNF2 family helicase TERM 1127 1107756 - 1107772 + g 75 -2.1 -5.29782 | opp_overlap 1107756 1107757, overlap 1107757 TATTTCATTAAAAAT CTGCACC ACA GGAGCAA TTTTTTCTAAGTCTA TERM 1128 1108044 - 1108020 - G 81 -7.1 -4.59342 | CTCATCATAAATAAA CTGACCTGAAA GAT TTTCCGGACAG TTAAAAGTAATGCGA TERM 1129 1110090 - 1110078 - g 76 -2.7 -5.38348 | AAAAAGATTAAAAAA GAAAT TAC ACTTC CAGGATTCCGCAAAG TERM 1130 1110748 - 1110732 - g 71 -4.4 -4.79826 | overlap 1110722 ATAGATGACGAAAAA GCTCGT CAACT ACAAGC AGAATCTCTAGACGA tig 1109940 - 1111268 + | trigger factor TERM 1131 1111793 - 1111774 - g 72 -7.2 -3.95584 | gap 1 TCCGCAGGAACTAAA GGAA-AGCG TCA CGCTCTTCC CCATAGCCGTATGAT clpP 1111447 - 1112058 + | ATP-dependent Clp protease proteolytic subunit TERM 1132 1112759 - 1112739 - g 72 -7.6 -3.89302 | gap 1, overlap 1112755 AGGAACCACAGCAAA CGTTCCTCC TAAA GGAGG-ACG TAAGCATCCTAACCA TERM 1133 1112966 - 1112945 - g 70 -8 -3.71649 | TTGCTAAAGTTGAAA CCGAAGAC CTGATT GCCTTCGG AATGATCCCTGAATT TERM 1134 1113187 - 1113170 - g 78 -5.5 -4.93547 | CCAAGCAAGCAAAAA CTGGAGC TCGT GCTCTAG GGATGATCCTAGAAA clpX 1112068 - 1113333 + | ATP-dependent protease ATP-binding subunit TERM 1135 1113843 - 1113853 + G 75 -3.2 -5.14163 | AAACTGCGTATCCTA CGTG CCA TACG TTTTTCTTCCTCCCT TERM 1136 1114115 - 1114125 + G 71 -4 -4.8487 | opp_overlap 1114115 GTTTAATCCAACACA TTTC CCT GAAA TTCTTTTTTTACTGC CP1024 1113363 - 1114595 + | poly(A) polymerase family protein TERM 1137 1115200 - 1115188 - g 70 -7.7 -3.61652 | overlap 1115185 1115184 TCTTCAAAGAATTAA GTTGG TAG CCAAC CTACCAGAACCTCGC TERM 1138 1115582 - 1115594 + G 72 -6.3 -4.29106 | opp_overlap 1115582 1115581, overlap 1115578 AAAAGCGTTAAGAAT TCCAT AGA ATGGA TTTCTTCATCTCGAA engA 1114712 - 1116175 + | GTP-binding protein EngA CP1026 1116251 - 1116451 + | hypothetical protein CP1027 1116705 - 1116520 - | hypothetical protein TERM 1139 1116793 - 1116766 - R 100 -11.4 -4.41616 | opp_overlap 1116766 1116768, overlap 1116768 AGCCTGTGAAACAAA TACCTAGAAGGA CTCC TCCTTCTAGGTT ATTTCTTAATCTTGA TERM 1140 1116766 - 1116794 + r 100 -9.8 -4.33755 | gap 1, opp_overlap 1116766 1116768, overlap 1116768 AGCCTGTGAAACAAA T-ACCTAGAAGGA CTCC TCCTTCTAGGTTA TTTCTTAATCTTGAT TERM 1141 1116768 - 1116791 + r 100 -14 -4.26924 | opp_overlap 1116766 1116768, overlap 1116766 CCTGTGAAACAAATA CCTAGAAGGA CTCC TCCTTCTAGG TTATTTCTTAATCTT TERM 1142 1116791 - 1116768 - R 100 -14 -3.81557 | opp_overlap 1116768 1116766, overlap 1116766 CCTGTGAAACAAATA CCTAGAAGGA CTCC TCCTTCTAGG TTATTTCTTAATCTT secA 1119711 - 1116799 - | preprotein translocase subunit SecA TERM 1143 1118331 - 1118312 - G 70 -3.5 -4.83169 | opp_overlap 1118315 1118319, overlap 1118313 AGGCCTTCAGAAAAA CGTCGTC CAGGTT GAGGACG TCCTGTATGTTCATC CP1029 1121220 - 1119895 - | hypothetical protein TERM 1144 1119979 - 1119963 - G 73 -7.3 -4.18018 | GTTTTTTACGTAAAA TTCGCAA AAT CTGCGAA CGTCGTTGTTTCTCC TERM 1145 1121023 - 1121037 + g 90 -5.6 -5.44119 | opp_overlap 1121020, overlap 1121025 TTCAAATAAACACTG CCGTCG ATA CGACCG TTTTTTTAAAATAGG CP1030 1122185 - 1121280 - | phosphatidylserine decarboxylase TERM 1146 1121927 - 1121917 - G 81 -4 -5.40072 | TTCCGGGTAAAAAAA TCAT TAA ATGA GGTGAAGTCTGCAAC TERM 1147 1122780 - 1122790 + G 71 -4 -4.83169 | ATTGCTCAAACGCAT TTTC AAG GAAA TTTTTCTAAGAAAAT trmE 1122336 - 1123664 + | tRNA modification GTPase TrmE TERM 1148 1124015 - 1124031 + G 71 -2.3 -5.08601 | overlap 1124030 ACTTCCGGGAGTTGG CAGAA AAACCGC TTCTG TTTTTCTTGGGATAG CP1032 1123671 - 1124300 + | endonuclease III CP1033 1124485 - 1125723 + | branched-chain amino acid transport system carrier protein, putative TERM 1149 1127451 - 1127469 + G 70 -3.8 -4.87803 | CAGTTTCTTACACAG TATGCGCA GCA TGAGCGTA TTTTATTTCCAAATC TERM 1150 1127670 - 1127690 + G 79 -7 -4.58283 | opp_overlap 1127681 1127682, overlap 1127667 1127682 GCTGGCTTTTTAGAT TTGAAACA AAACC TGTTTCAA TTTTTAAAACAGTTC TERM 1151 1127703 - 1127681 - g 71 -4.2 -4.89521 | opp_overlap 1127670 1127682, overlap 1127682 AGATTTGAAACAAAA CCTGTTTCAA TTT TTAAAACAGT TCCTATCTACGCAGA CP1034 1125753 - 1129400 + | Snf2/Rad54 family helicase CP1035 1129889 - 1129425 - | hypothetical protein TERM 1152 1129782 - 1129761 - G 70 -3.6 -4.89477 | overlap 1129762 GTGGCAAGAAGAAAA CCCTCCTG AGGCTA CTGGAGGA TCTTGAAGAAAGGCG CP1036 1129945 - 1130067 + | hypothetical protein TERM 1153 1130071 - 1130057 - f 77 -10 -2.99951 | overlap 1130054 TCAATTATGAAATCA CGACCT CTT AGGTCG CTAAAATGCCATTAA CP1037 1130313 - 1131698 + | dihydrolipoamide dehydrogenase CP1038 1131695 - 1132618 + | lipoyl synthase CP1039 1133175 - 1133005 - | hypothetical protein TERM 1154 1133150 - 1133160 + g 75 -5.4 -4.77165 | TCAAAAAAAGCTCCT TCTG ATT CAGA TTTTCTTATAAGCAC CP1041 1133791 - 1133480 - | hypothetical protein CP1040 1133394 - 1133606 + | hypothetical protein CP1042 1134698 - 1134141 - | hypothetical protein TERM 1155 1135374 - 1135330 - g 70 -3.7 -4.82901 | gap 3, overlap 1135331 GTGGCTGCACAAAAA TTGCCTCA--AGCTGCAGCGGC TACA GCCGGAGCAGCTACTGA-GCAA ATGTGGGATATCGCG TERM 1156 1136003 - 1135990 - g 76 -6.7 -4.42653 | ATGGGAGGTACAAAA GGGTT CTTC AACCC TACACCATATACAAA CP1043 1135171 - 1136178 + | type III secretion protein SctJ CP1044 1136178 - 1137011 + | hypothetical protein CP1045 1137132 - 1137833 + | type III secretion system protein CP1046 1137848 - 1138768 + | type III secretion system protein CP1047 1138780 - 1139067 + | type III secretion inner membrane protein SctS CP1048 1139075 - 1139944 + | type III secretion inner membrane protein SctT TERM 1157 1140153 - 1140191 + T 73 -8.3 -3.53224 | opp_overlap 1140140 1140153 1140185 CATGCCTGAAAACAA GGCAAAAAGTTGAGG AAAGGAGGG CTTCAACATTTTGCC TTTAGGGAAAAAGTA CP1049 1140686 - 1140210 - | hypothetical protein CP1050 1141775 - 1140771 - | hypothetical protein CP1051 1142304 - 1141780 - | hypothetical protein TERM 1158 1142277 - 1142296 + g 78 -5.8 -4.76041 | gap 1, opp_overlap 1142277 TGAGTAATTCCATAA GCACAAAGC CAC GCTTT-TGC TTTTTCATAGCTATA CP1052 1142741 - 1142307 - | hypothetical protein CP1053 1143128 - 1142757 - | hypothetical protein CP1054 1144327 - 1143152 - | general secretion pathway protein F TERM 1159 1144204 - 1144220 + g 79 -8.1 -4.25104 | opp_overlap 1144204 AGGCGACCTCACGAA TATCCAA AAC TTGGATA TTTTCCTGGGCGAGC CP1055 1145827 - 1144337 - | general secretion pathway protein E CP1056 1148081 - 1145817 - | general secretion pathway protein D TERM 1160 1147488 - 1147472 - G 73 -2.9 -5.14563 | TTCTGGAGGAAAAAA CTCCAGC AAC ACTGCAG CCCTCCTTACGCATC CP1057 1149335 - 1148082 - | hypothetical protein TERM 1161 1148663 - 1148651 - G 70 -7.7 -3.60098 | AGTTGCCATCCCAAA GGAGA ACA TCTCC AACAGCAAGGTACCG TERM 1162 1148781 - 1148793 + g 84 -6.3 -5.07652 | AAACTTATCCACACC GATAC GAC GTATC TTTTGTTTTACAGGA TERM 1163 1149429 - 1149417 - R 75 -4.9 -4.87389 | CAGGTTAAAAATAAA GTTAT AAG ATAAC TTAAAAAACAAAAAA TERM 1164 1149485 - 1149465 - R 75 -4.9 -4.97405 | opp_overlap 1149465, overlap 1149481 ATTTATAAAAACAAA TTAAATTCA ATT TAAATTTAA AAACTAAATCCAATT CP1058 1150572 - 1149505 - | proline dipeptidase TERM 1165 1149549 - 1149559 + g 70 -2.6 -5.04597 | opp_overlap 1149549 GACGTGCAGTCAAAC TAAA ATT TTTA TTTTTATCTATACAT mutL 1152319 - 1150577 - | DNA mismatch repair protein TERM 1166 1150869 - 1150852 - G 71 -4.9 -4.67943 | gap 1, opp_overlap 1150852 1150843 TTTCAATAGAGAAAA CACAAGGT CCT ACCT-GTG ATATTTCTATTCCTA TERM 1167 1150937 - 1150923 - G 95 -5.6 -5.60689 | overlap 1150925 TGAGAGAAGAAAAAA GCCTCC TCA GGAGTC ACCTGAAGGCGTAGA TERM 1168 1151477 - 1151467 - G 82 -6.8 -4.91109 | GCTTCAGCACAAAAA CAGG ATA CCTG TGTAGAGGCAGAAGC TERM 1169 1152150 - 1152126 - G 76 -10.9 -2.52464 | opp_overlap 1152122, overlap 1152129 1152130 TCGGCTCTGAAGCCA CAACCATTATC TCT GATAATGATTG CGCCTTGTCCCCCTC TERM 1170 1153033 - 1153005 - g 72 -9.8 -2.78384 | gap 1 TTCCTCCTTACTACA TTGCTGATAGCTT ATTG AAGCTA-CAGCAA CCCGAAGAATCTAAC CP1060 1152542 - 1153237 + | type III secretion chaperone SycD CP1061 1153258 - 1153620 + | hypothetical protein TERM 1171 1153906 - 1153874 - g 71 -4.1 -4.91109 | opp_overlap 1153883 CCTCGACTACAAAAA CAGAAACAGCTCC ACAACAG GGAGTTGCTGCTG GGAAAGAATCCTCAG CP1062 1153657 - 1155123 + | hypothetical protein TERM 1172 1155370 - 1155357 - g 82 -2.4 -5.59357 | AGTACAGGAAAAAAA GAAG CTACAT CTTC AACTACTAAAAGTAG CP1063 1155156 - 1156490 + | hypothetical protein TERM 1173 1156536 - 1156518 - T 100 -10.3 -5.52986 | opp_overlap 1156518 ATCTGATCAAAAAAA GCTCGGT TTGAT ACCGAGC TTTTTCATGTAAAGC TERM 1174 1156518 - 1156536 + T 100 -10.3 -4.8048 | opp_overlap 1156518 ATCTGATCAAAAAAA GCTCGGT TTGAT ACCGAGC TTTTTCATGTAAAGC CP1064 1157478 - 1156561 - | hypothetical protein TERM 1175 1157275 - 1157258 - G 79 -8.5 -4.2074 | TTGGTAAGATAGAAA CCTGTTA AAGC TAACAGG ACGATATATAAGAAT TERM 1176 1157560 - 1157579 + H 78 -2.2 -5.60993 | opp_overlap 1157574 CCTGGCGCTTTGGAA CTTGTATT AAAA AATAAAAG TTTTTTTATAAAAAA TERM 1177 1157598 - 1157579 - H 74 -2.2 -5.45813 | opp_overlap 1157579, overlap 1157574 1157580 TATTAAAAAATAAAA GTTTTTTT ATAA AAAAAAGC TTCTTGCTTTGATCA thrS 1157672 - 1159579 + | threonyl-tRNA synthetase CP1066 1159612 - 1160379 + | ParA family protein TERM 1178 1160935 - 1160919 - g 89 -6.5 -5.28942 | GAGGGGAAAGAAAAA GCGAGCT TTT AGATCGC ATTCGCAAAGAGTTC TERM 1179 1161112 - 1161101 - g 75 -3 -5.14894 | opp_overlap 1161101 AAAAAACTAGAAAAA GTTA AAAG TAAC CTCTTTCCCGATACA CP1067 1160384 - 1161136 + | virulence protein pGP6-D-related protein TERM 1180 1161642 - 1161622 - g 70 -2.5 -4.96848 | TGTTGGAGAGAAAAA TCTTCAGGA AAT TCAAGAAGA AATTACATCATTAAA CP1068 1161140 - 1161694 + | hypothetical protein CP1069 1161703 - 1162737 + | tryptophanyl-tRNA synthetase CP1070 1162746 - 1164719 + | excinuclease ABC subunit B eno 1164911 - 1166197 + | phosphopyruvate hydratase CP1072 1166457 - 1167506 + | hypothetical protein CP1073 1168597 - 1167584 - | hypothetical protein TERM 1181 1168705 - 1168675 - R 81 -7.9 -4.39133 | gap 1, opp_overlap 1168684 CAACAAGTATGAAAA TTGGAATT-ATGAA TCAC TTCATGAATTCCAA GCTTACGATTTACTT CP1074 1169843 - 1168746 - | hypothetical protein CP1075 1172124 - 1170100 - | hypothetical protein TERM 1182 1170715 - 1170704 - G 70 -5.8 -4.4009 | opp_overlap 1170703 TTCCAGTCCATAAAA GCTC CTGT GAGC AATTGCTGATTCTGC TERM 1183 1172180 - 1172153 - R 93 -11.5 -4.0342 | opp_overlap 1172153 TGCAAGTAAGAAGAA TATAGCTCAGA TTATAT TCTGAGCTATA TTTTATCTGTTTATC TERM 1184 1172153 - 1172180 + r 100 -11.5 -4.76423 | opp_overlap 1172153 TGCAAGTAAGAAGAA TATAGCTCAGA TTATAT TCTGAGCTATA TTTTATCTGTTTATC CP1076 1173315 - 1172245 - | hypothetical protein TERM 1185 1173413 - 1173399 - R 71 -6.4 -4.15788 | opp_overlap 1173390 AACCGTCTGAAGAAA CTCCAG TTG CTGAAG AATTCGCCCCTCCTA CP1077 1174269 - 1173436 - | hypothetical protein CP1078 1174553 - 1174422 - | hypothetical protein TERM 1186 1175534 - 1175496 - g 89 -7.3 -5.0538 | opp_overlap 1175501, overlap 1175499 1175501 TCCTATGCTAAAAAA GAAGAGAGCTTTGCGCC TTTAT GGCGCAGAGCTCGCATG TACACTGCCTATTTC TERM 1187 1175531 - 1175499 - g 100 -13.4 -4.63089 | opp_overlap 1175501, overlap 1175496 1175501 TATGCTAAAAAAGAA GAGAGCTTTGCGCC TTTAT GGCGCAGAGCTCGC ATGTACACTGCCTAT TERM 1188 1175529 - 1175501 - g 100 -14.6 -3.91465 | opp_overlap 1175501, overlap 1175499 1175496 TGCTAAAAAAGAAGA GAGCTTTGCGCC TTTAT GGCGCAGAGCTC GCATGTACACTGCCT TERM 1189 1176227 - 1176247 + G 82 -10.5 -3.69434 | TGGCGAGACTTCTTG GCTATTCCA TCC TGGAATGGC TTTAGGCTTCCTTCC CP1079 1174620 - 1176527 + | regulatory protein, putative TERM 1190 1176939 - 1176928 - g 71 -2.2 -5.24551 | TGAAATGAAGAAAAA GCTA TCCG CAGC TGTAGGGAAAGCCTT TERM 1191 1177962 - 1177944 - g 75 -3.1 -5.24129 | TTTCGTTACAAAAAA TCAGCAA GGATA CTGCCGA CAGCTTCTCAAAAAC CP1080 1176524 - 1178338 + | hypothetical protein TERM 1192 1179272 - 1179238 - g 72 -9.4 -3.23449 | overlap 1179236 AGCACAAATCCAACA GTTGCTCTCGCATCAA TAT TTGATGCAAAAACTAC AAAATGTCCATGAGA TERM 1193 1180681 - 1180695 + G 72 -7.2 -3.96148 | TTTGCAACATGTAGT TCATGA CTT TCATGA TTTCTGCTCCGACCA CP1081 1178393 - 1181335 + | hypothetical protein sdhB 1182113 - 1181337 - | succinate dehydrogenase iron-sulfur subunit sdhA 1184004 - 1182124 - | succinate dehydrogenase flavoprotein subunit CP1084 1184901 - 1184008 - | succinate dehydrogenase, cytochrome b558 subunit, putative TERM 1194 1185036 - 1185012 - R 75 -10.1 -2.5671 | overlap 1185011 1185010 GACAAAATAGAAAGG TTATGGAGTTC TAT GAACTCCATCA AATTAACCGTGCAGA CP1085 1185824 - 1185039 - | mttC protein, putative TERM 1195 1185094 - 1185104 + g 74 -6.8 -4.27316 | GCTGCAAGCTCTTGT GGGA ACA TCCC TTTTACATTGGCAAC TERM 1196 1185540 - 1185557 + g 74 -6.9 -4.31293 | opp_overlap 1185539 ATAATCTAAACCGAC CTCTCCG ATTG CGGCGAG TTTCTTACTATGTGC TERM 1197 1186077 - 1186060 - R 100 -12.7 -5.38054 | opp_overlap 1186056 TGTTACAAATAAAAA GGGCAGC ATAT GCTGCCC TAACAATTTTTAAGG CP1086 1188291 - 1186147 - | thiol:disulfide interchange protein DsbD TERM 1198 1187787 - 1187772 - G 74 -7.6 -3.99324 | opp_overlap 1187772 GTGTATCAGGATAAA GAGAAG GCTC CTTCTC TTCGTAGGGCAGTGT CP1087 1188452 - 1189150 + | MotA/TolQ/ExbB proton channel family protein CP1088 1189147 - 1189554 + | ExbD/TolR family protein TERM 1199 1190036 - 1190012 - g 100 -10.9 -4.56358 | TACATGTAGATAAAA TTGAGAAAAGT GAA ACTTCTCTCAA AAATATCTCCTGGCC TERM 1200 1190140 - 1190101 - g 95 -11.6 -3.762 | overlap 1190104 AAAGCAACTCAAGAA GACGAGCTATGTGAGT TATTTCGC ACTCACATAGCTCTCC CCTCTAAAGGGTATG TERM 1201 1190137 - 1190104 - g 95 -14.1 -2.66329 | overlap 1190101 GCAACTCAAGAAGAC GAGCTATGTGAGT TATTTCGC ACTCACATAGCTC TCCCCTCTAAAGGGT CP1089 1189558 - 1190346 + | hypothetical protein tolB 1190378 - 1191673 + | translocation protein TolB CP1091 1191670 - 1192248 + | peptidoglycan-associated lipoprotein CP1092 1192238 - 1192855 + | putative endopeptidase lyte precursor CP1093 1192962 - 1193351 + | hypothetical protein CP1094 1193974 - 1193348 - | anti-oxidant AhpCTSA family protein groEL 1195842 - 1194262 - | chaperonin GroEL TERM 1202 1195709 - 1195719 + g 75 -3.2 -5.1675 | TTCGTTAAGACAATA GGAG CTT TTCC TTTTTTGATGACTAC CP1096 1197197 - 1195953 - | hypothetical protein CP1097 1197412 - 1198032 + | putative deoxyribonucleotide triphosphate pyrophosphatase CP1098 1198248 - 1198015 - | hypothetical protein CP1099 1198955 - 1198245 - | uracil-DNA glycosylase TERM 1203 1200631 - 1200614 - g 71 -4.2 -4.90079 | opp_overlap 1200614 1200629, overlap 1200592 ATCCGAACAACAAAA TCCAAA GACACA TTTGGA ACTTTTCCTTGATGA CP1100 1199058 - 1200977 + | ATP-dependent helicase PcrA CP1101 1200980 - 1202302 + | RNA polymerase factor sigma-54 CP1102 1203103 - 1202309 - | hypothetical protein TERM 1204 1204388 - 1204377 - g 73 -5.8 -4.55697 | AGTGGGAGAAAGAAA TCCC TGAA GGGA AAACCGAAAATGATG TERM 1205 1204448 - 1204430 - g 71 -6.6 -4.20025 | opp_overlap 1204430 AACTCTGAAGAGAAA GCCCGTCA CTA TGCCGAGC TGTTAGAGAAATCCT TERM 1206 1204611 - 1204599 - g 75 -9.1 -3.63627 | opp_overlap 1204597 TGTCTATAGCGCAAA CCCTC TAT GAGGG CGTCGATTTAGATAG TERM 1207 1206059 - 1206047 - g 70 -2.7 -5.00884 | AGCTCGGTTAAAAAA TCTTC AGA AAAGA AAACAGGTCCTTTAT CP1103 1203710 - 1206325 + | fused DNA topoisomerase I/SWI domain-containing protein CP1104 1207284 - 1206277 - | hypothetical protein TERM 1208 1206506 - 1206524 + g 76 -6.8 -4.48741 | TCCAGAAACGCAGCT TTCCTTTT GAT AAAGGGAA TTTTCTCATAGCTTC CP1105 1207559 - 1207263 - | hypothetical protein TERM 1209 1207308 - 1207298 - G 70 -2.6 -4.93968 | ATGGAGAATGAAAAA TATT AAG AATA ATAAAACGTAGGACT TERM 1210 1207349 - 1207339 - G 75 -5.4 -4.90381 | CTTAATATAACAAAA GGAA GGA TTCC AAGGCAAAGCAGACC CP1106 1207661 - 1209052 + | hypothetical protein CP1107 1209061 - 1209645 + | hypothetical protein CP1108 1209636 - 1210922 + | hypothetical protein TERM 1211 1211016 - 1211038 + G 80 -9.1 -3.90856 | opp_overlap 1211015 1211012 1211007 GAAGAACGCAAGCAT GAGGCCTCT TCTGC AGTGGCCTC TTTCGTTCGCAGCTT CP1109 1210932 - 1211474 + | 5-formyltetrahydrofolate cyclo-ligase, putative recA 1211846 - 1212907 + | recombinase A TERM 1212 1212960 - 1212999 + T 100 -18.8 -3.57792 | opp_overlap 1212950 1212962 1212965, overlap 1212962 1212965 AATTACCTTGAGACA AAGAATCCCCCCTTCTAA TACT TTAGGAGGGGGGATTCTG TTTACAGATGCATGA TERM 1213 1212962 - 1212997 + T 100 -21.4 -3.36694 | opp_overlap 1212962 1212965, overlap 1212960 1212965 TTACCTTGAGACAAA GAATCCCCCCTTCTAA TACT TTAGGAGGGGGGATTC TGTTTACAGATGCAT TERM 1214 1212997 - 1212962 - T 100 -19.2 -4.04206 | opp_overlap 1212962 1212960 1212965, overlap 1212965 TTACCTTGAGACAAA GAATCCCCCCTTCTAA TACT TTAGGAGGGGGGATTC TGTTTACAGATGCAT TERM 1215 1212965 - 1212994 + T 100 -17.3 -3.82202 | opp_overlap 1212965 1212962, overlap 1212962 1212960 CCTTGAGACAAAGAA TCCCCCCTTCTAA TACT TTAGGAGGGGGGA TTCTGTTTACAGATG TERM 1216 1212994 - 1212965 - T 100 -15.1 -4.14627 | opp_overlap 1212962 1212960 1212965, overlap 1212962 CCTTGAGACAAAGAA TCCCCCCTTCTAA TACT TTAGGAGGGGGGA TTCTGTTTACAGATG CP1111 1213739 - 1213065 - | coenzyme PQQ synthesis protein c, putative CP1112 1214486 - 1213746 - | hypothetical protein CP1113 1214955 - 1214443 - | dihydrofolate reductase CP1114 1216333 - 1214981 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropterin pyrophosphokinase/dihydropteroate synthase CP1115 1216710 - 1216306 - | DhnA family protein TERM 1217 1216377 - 1216392 + gr 71 -4 -4.89852 | gap 1 GATTTAATAGGTTGG GAACAGG TGG CC-GTTC TTTTTCTACCTCTAG CP1116 1218539 - 1216764 - | RNA polymerase sigma factor TERM 1218 1217009 - 1216989 - G 81 -7.5 -4.7261 | opp_overlap 1216990 1217008, overlap 1216990 ATGGATCAAAACAAA TCGCTCACG ATC CGTAAGCGT CTTTAAGACCTCTTT TERM 1219 1216990 - 1217008 + g 71 -8.8 -3.36341 | opp_overlap 1216989 1216990 TGGATCAAAACAAAT CGCTCACG ATC CGTAAGCG TCTTTAAGACCTCTT TERM 1220 1217008 - 1216990 - G 83 -11 -3.42481 | opp_overlap 1216990, overlap 1216989 TGGATCAAAACAAAT CGCTCACG ATC CGTAAGCG TCTTTAAGACCTCTT TERM 1221 1217634 - 1217664 + g 74 -6.8 -4.38748 | opp_overlap 1217632 1217629, overlap 1217630 1217635 TTTATACAACTTACG CTTAGCTGCTGCCA ACT TTGCAGCAGCAAAC TTATTTCTTTCTGCA TERM 1222 1217635 - 1217663 + g 77 -10.3 -3.22164 | opp_overlap 1217632 1217629, overlap 1217634 1217630 TTATACAACTTACGC TTAGCTGCTGCCA ACT TTGCAGCAGCAAA CTTATTTCTTTCTGC TERM 1223 1217803 - 1217788 - G 80 -9 -4.03167 | CGACAATGGAAACAA CGCAAG TAGG CTTGCG TCCGAATACGACACT CP1117 1219846 - 1218641 - | hypothetical protein rpsT 1220107 - 1220406 + | 30S ribosomal protein S20 CP1119 1220437 - 1221285 + | hypothetical protein TERM 1224 1221336 - 1221313 - T 84 -5.2 -5.52384 | opp_overlap 1221313 TTCGCAGCAAAAAAA CCCTCTTAGA GTAT TCTTTGAGGG TTTTTTTATTTTGAT TERM 1225 1221313 - 1221336 + T 93 -5.2 -6.11229 | opp_overlap 1221313 TTCGCAGCAAAAAAA CCCTCTTAGA GTAT TCTTTGAGGG TTTTTTTATTTTGAT CP1120 1222839 - 1221358 - | exodeoxyribonuclease V, alpha subunit, putative TERM 1226 1221882 - 1221872 - G 74 -4 -4.95155 | GGGAGAGGAGAAAAA GAAA TCA TTTC GCCACGCAATACAGA TERM 1227 1222397 - 1222358 - G 81 -5.3 -5.08824 | gap 2 TGTGCAGCTAAAAAA GTTTTTCC-T-GTTCCTGG GCCT CCAGAAACTATAGAAAAAC ATCCTTGAGTTATTT TERM 1228 1222743 - 1222730 - G 79 -3.1 -5.35224 | overlap 1222732 GCGAGAAAAACAAAA GACTC TTCA AAGTC CGAAGAGATGTGCTT TERM 1229 1222750 - 1222732 - G 70 -6 -4.29117 | overlap 1222730 GAGAAAAACAAAAGA CTCTTCAA AGT CCGAAGAG ATGTGCTTAGAAGCA CP1121 1224835 - 1223006 - | hypothetical protein TERM 1230 1224289 - 1224271 - G 76 -10.4 -2.93335 | overlap 1224270 GCGCAGAAATATAAT CTAACAGA AAA TCTGTTAG CAGCTGTTCAATACT TERM 1231 1225063 - 1225075 + GH 78 -7.7 -4.20025 | TCATATTGTTTGTTA CTGAG GAT CTCAG TTTATCTTCGCAATT TERM 1232 1225642 - 1225623 - gH 95 -5 -5.7946 | opp_overlap 1225622 TCTTTAAGAAAAAAA TTAGGTCC CTAC GGATCTAA AATTGTAACGATTCG CP1122 1225032 - 1225739 + | transcriptional regulator CP1123 1225681 - 1225848 + | hypothetical protein CP1124 1225910 - 1226440 + | UDP-N-acetlyglucosamine pyrophosphorylase GlmU-related enzyme CP1125 1226456 - 1227325 + | geranylgeranyl pyrophosphate synthase, putative TERM 1233 1227434 - 1227410 - T 100 -15.9 -5.24531 | ATTTCTTATAAAAAA GGGATGAAGAT AAA ATCTTCATCCC CGAGAGAGATCTGGA CP1126 1229468 - 1227873 - | hypothetical protein TERM 1234 1229589 - 1229603 + G 71 -10 -2.57132 | overlap 1229588 CCCTACAGGGGAGCA CGACGT ATA ACGTCG CTTATGACCCCAAGC CP1127 1229540 - 1229704 + | hypothetical protein CP1128 1229717 - 1229833 + | hypothetical protein