TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.536635 %AT, 2786039 nt, 22959 terms. Intergenic: 0.620814 %AT, H2T: 343315 nt, 2813 terms; T2T: 76185 nt, 1689 terms; H2H: 124060 nt, 1903 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|193213720|ref|NC_011026.1| Chloroherpeton thalassium ATCC 35110, complete genome (length 3293456) TERM 1 1429 - 1404 - g 75 -9.7 -3.5594 | overlap 1405 AATTCATGCCGTAAA TGCGATCGACA AAAA TGCCGATCGCT CTGAAGAAGTGCGAA TERM 2 1428 - 1405 - g 81 -13.2 -2.73243 | overlap 1404 ATTCATGCCGTAAAT GCGATCGACA AAAA TGCCGATCGC TCTGAAGAAGTGCGA Ctha_0001 1 - 1491 + | chromosomal replication initiator protein DnaA TERM 3 1467 - 1486 + T 70 -7.8 -3.67864 | opp_overlap 1467 TGAAGAATTGCATAA GCGACTTG AAAT CATGTCGC TTTAACATTACATTC Ctha_0002 1956 - 1606 - | hypothetical protein Ctha_0003 3026 - 1998 - | Holliday junction DNA helicase RuvB TERM 4 2526 - 2509 - G 72 -9.1 -3.58536 | gap 1, opp_overlap 2520 AAATTGATGCCGAAA CGCGCTCG AAG CG-GCGCG GTCAAAAGCCCCGCG TERM 5 3110 - 3127 + r 72 -5.7 -4.57341 | opp_overlap 3084 3082 AAGGTGTAGAACCGC TTTGTTT AGCC AAACAAA TTTTTCCCAGAAATT Ctha_0004 3303 - 3142 - | hypothetical protein Ctha_0005 4132 - 3386 - | hypothetical protein TERM 6 4506 - 4522 + H 76 -2.9 -5.47431 | TTCCCTCTGCCAACG CTCTGAG AAG TTCCGAG TTTTTTGTATCTTGC TERM 7 4613 - 4635 + G 72 -10.6 -2.82142 | opp_overlap 4613, overlap 4612 GATCAACATTGAAGA CGAGATGCGG GAT TCGTATCTCG ATTATTCCATGTCGG TERM 8 5343 - 5330 - g 70 -2.3 -5.0538 | opp_overlap 5330 GGTGACGCCAAAAAA TGGCC GCGA GTCCA TCATTATCACCGAAC TERM 9 6023 - 6001 - g 82 -6.9 -4.84642 | overlap 6005 TGCAAATTAAGAAAA CCTACGGCG ATGAA CGCCGCACG CAAATTGTGTATGAA Ctha_0006 4575 - 7100 + | DNA gyrase, A subunit TERM 10 7126 - 7147 + T 100 -10.9 -5.75945 | gap 1, opp_overlap 7126 TACCTACCAAGCAAA GAGCCGCAGA TTT TC-GCGGCTC TTTTTTTTGACCGAT TERM 11 7147 - 7126 - T 86 -10.9 -3.96298 | gap 1, opp_overlap 7126 TACCTACCAAGCAAA GAGCCGCAGA TTT TC-GCGGCTC TTTTTTTTGACCGAT Ctha_0007 10736 - 7173 - | chromosome segregation protein SMC TERM 12 7965 - 7913 - G 73 -10.7 -3.11619 | opp_overlap 7932 TAATAACGGATTGAA GATTTTCGATTTTCATCTCCAAGCG CGA CGCCTGTTGTTGAAATTCAAAAATC ATCTGCGACGTGATT TERM 13 8625 - 8641 + g 79 -2.1 -5.58454 | overlap 8627 ACCGGTTTGCGCCTC CAGAAGC GCC GCCTCCG TTTTTTTGATGTCCG TERM 14 9651 - 9662 + g 91 -2.2 -5.83211 | ATGGGCTTTGCGGGC GTCT TCGT AGGC TTTTTTCTTTTCGTC TERM 15 9854 - 9864 + g 72 -8.2 -3.68795 | overlap 9850 TTACAACGATGTTTT CGCG CCG CGCG TTAATTTCCTTTTGA TERM 16 10086 - 10073 - G 75 -6.7 -4.4715 | GTTCAAGCGACAAAA GCTCA TCTT TGAGC GTGCGAACTTGCGCG TERM 17 10794 - 10777 - R 100 -4.7 -6.20267 | opp_overlap 10777 CTAAAAACAAAAAAA GGCCGCG TGCC CCCGACC TTTTTGACTTGACTT TERM 18 11016 - 10999 - R 100 -8.3 -6.20267 | opp_overlap 10999 GCAAAAATAAAAAAA GGCCGCG TATC CCCGGCC TTTTCAAATTGAGTG TERM 19 10999 - 11016 + r 79 -8.3 -4.19953 | opp_overlap 10999 GCAAAAATAAAAAAA GGCCGCG TATC CCCGGCC TTTTCAAATTGAGTG Ctha_0008 13699 - 11114 - | glycoside hydrolase family 2 sugar binding TERM 20 11248 - 11268 + g 71 -10.5 -2.74792 | overlap 11247 11250 CCTTGTGCCGCGCTT GATTGGTGA CAA TCGCCAATC CTTTGAAAGTCCTAA TERM 21 11577 - 11555 - G 85 -7 -4.99435 | overlap 11563 TTCAAGAATCAAAAA GTTCAACACG CTG CGCATCGAAC CGCCGCCAATCACAT TERM 22 12871 - 12857 - G 72 -5 -4.72188 | overlap 12858 GGAACGCAAAACAAA CTCCAT GCG ATAGAG CGCTGGATAAGCCGG TERM 23 12988 - 12967 - G 71 -3.7 -4.74103 | gap 1, overlap 12969 GTTTGAATGTAAAAA GATTGGGCTC GTT GAGCACAA-C GGCTGAATCCAGCAG TERM 24 12987 - 12969 - G 71 -7.4 -3.98859 | overlap 12967 TTGAATGTAAAAAGA TTGGGCTC GTT GAGCACAA CGGCTGAATCCAGCA TERM 25 13818 - 13840 + H 70 -4.8 -4.54727 | TTCCTTAAGTTTATC GCGAAGGT TAAATAT ACCTGCGC TTTTGCTTTAGAACA Ctha_0009 13989 - 14675 + | Isoprenylcysteine carboxyl methyltransferase Ctha_0010 14775 - 15797 + | Abortive infection protein Ctha_0011 15831 - 16115 + | hypothetical protein TERM 26 16180 - 16194 + G 100 -2.1 -6.21477 | TGTTATTTGGCTCAT TGTTC TCGGC GGACA TTTTTTTTTCCTGTT TERM 27 16298 - 16323 + G 100 -8.3 -5.25803 | gap 1, overlap 16301 GATTTTCTTTTATTT TTGGCCAGC-GC CGG GCTGCTGGCTGA TTTTTTCTACGGGTT TERM 28 16301 - 16320 + G 73 -10 -3.44801 | gap 1, overlap 16298 TTTCTTTTATTTTTG GCCAGC-GC CGG GCTGCTGGC TGATTTTTTCTACGG TERM 29 16436 - 16448 + G 73 -4.1 -4.74013 | overlap 16437 CACAATCTTGGCGCG TCGTT CCT AACGG TTTTCTATATTTCGC Ctha_0012 16112 - 16927 + | phosphatidate cytidylyltransferase Ctha_0013 17017 - 17526 + | putative PTS IIA-like nitrogen-regulatory protein PtsN TERM 30 17702 - 17684 - g 72 -8.1 -3.72576 | CTGTTTTTGAGCAAA CCGCGCT TTTTC AACGCGG AATTGGGGAGACAAC Ctha_0014 17545 - 18828 + | histidyl-tRNA synthetase Ctha_0015 19690 - 18896 - | OmpA/MotB domain protein TERM 31 19340 - 19322 - G 74 -8.2 -3.85698 | TTTTTGCTCGATAAA TGCTTCTC CAT GAAAAGCA ACCAACGTGTAGGTC TERM 32 19586 - 19562 - G 79 -12.2 -2.78463 | overlap 19567 ATGCGCGGCATCAGA CGATAGCGCC GTAAT GGCGCTATCA GAGCGATCGCGAAGG Ctha_0016 20293 - 22614 + | ABC transporter-related protein Ctha_0017 22702 - 23976 + | HlyD family secretion protein TERM 33 24065 - 24097 + G 79 -2.6 -5.3236 | GCCAACCGCATCTGC GCAAGTAGCCGACG ACACA CTTTCGCTACATGC TTTTTTATCCATTGT TERM 34 24644 - 24633 - g 77 -7.2 -4.38154 | overlap 24634 24635 ACACGCGCCAGAAAA GGCG AAGC CGCC GCCATCGACACGGTA TERM 35 24869 - 24855 - g 78 -6.4 -4.55887 | overlap 24851 24849 CGCCAAAAATACAAA GCGCTT GAA AAACGC CCTGAACTGCGGCAG TERM 36 25159 - 25109 - g 71 -3.5 -4.82855 | overlap 25129 CATCAAATTTAAAAA GCTGGAAACGG-AGCGTAAAATTCT TGC AGAAATTGACGATGCCATTTC-AGC CATTCAAGCCGCCCA Ctha_0018 23979 - 25403 + | outer membrane efflux protein Ctha_0019 27825 - 25462 - | multi-sensor hybrid histidine kinase Ctha_0020 28479 - 28069 - | response regulator receiver protein Ctha_0021 32501 - 28503 - | multi-sensor signal transduction histidine kinase TERM 37 29039 - 29054 + g 74 -5.4 -4.5774 | opp_overlap 29039 TCACGCGGCCAACCA GAAGCG AAAG CGTTTC TTTTCCTTCTTCATC TERM 38 30194 - 30205 + g 71 -7.2 -4.14739 | GTTCGAATTCTCCTG GCGC CAAC GCGC TTTTCCAATCAGTAA TERM 39 32144 - 32117 - G 87 -6.9 -5.1356 | overlap 32121 TCGCATGAAGAAAAA CCGATGCGCCA TTTACG TGGCGCAGCTG AAACGGGCTGCAAAA TERM 40 33060 - 33036 - g 83 -4.2 -5.28176 | overlap 33039 GCTATCGAGAAAAAA GAAGCCGAGC TTGAG GCTTGGCTTG AAAAAATGGAAACCG TERM 41 33057 - 33039 - g 74 -5.9 -4.73105 | overlap 33036 ATCGAGAAAAAAGAA GCCGAGC TTGAG GCTTGGC TTGAAAAAATGGAAA Ctha_0022 32745 - 33167 + | hypothetical protein Ctha_0023 33271 - 34368 + | KWG Leptospira repeat protein TERM 42 34448 - 34468 + F 74 -9.1 -3.65812 | ACGAATTTTCAATTT TTTCCGATT TTT GATCGGAAA TTCTGTTACAAACGC TERM 43 34561 - 34550 - g 71 -7.2 -4.03234 | overlap 34558 34559 TCTGCTTGACACAAA CGGC ACAA GCCG GCGACAAAAGCGTCG TERM 44 34595 - 34571 - g 75 -6.3 -4.37658 | overlap 34558 34559 34572 34583 34584 AAGCCGGCGACAAAA GCGTCGGCGAA ACG CTCGGCGACGA CGCAACAGAATATTA TERM 45 34594 - 34572 - g 71 -9.8 -3.22113 | overlap 34558 34559 34571 34583 34584 AGCCGGCGACAAAAG CGTCGGCGAA ACG CTCGGCGACG ACGCAACAGAATATT Ctha_0024 34501 - 35304 + | phosphoesterase PA-phosphatase related TERM 46 35281 - 35293 + T 74 -4.8 -4.85782 | GCTCCGCTTGAAGTT CCGA TTGTT TCGG TTTCTTTTTGAAGAA Ctha_0025 36621 - 35323 - | glutamate-1-semialdehyde-2,1-aminomutase Ctha_0026 36650 - 36913 + | hypothetical protein TERM 47 37289 - 37269 - g 81 -5.3 -5.24129 | opp_overlap 37269 37272, overlap 37271 TTGTGCTACAAAAAA GGTCAAGCC AAA GGCTTGTGC ATTATTGGCAAATGC TERM 48 37453 - 37432 - g 74 -5.7 -4.56597 | overlap 37451 GCGTTGTTCTAAAAA GCCTGAGCG ATTT CGAACAGGC CATCGGCTATTTTTT Ctha_0027 37080 - 38798 + | diguanylate cyclase and serine/threonine protein kinase with TPR repeats TERM 49 39300 - 39327 + G 78 -5.6 -4.82667 | GTGTTTCGTGTGTTG GGGTGGCAAG CCGGTTTA TTTGTCACCC TTTTTGATATGCTCA TERM 50 39341 - 39357 + G 75 -6.5 -4.49337 | CCTTTTTGATATGCT CAAAGGC GTA GCCGTTG TTTTGTGGGTTGTCG Ctha_0028 39153 - 39866 + | protein of unknown function DUF205 Ctha_0029 40082 - 41068 + | Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) TERM 51 42075 - 42062 - g 72 -5.3 -4.66163 | overlap 42071 AGCTTGACGGAAAAA GTGAA AAAT TTCAC CATTGGCGGCGAATT Ctha_0030 41348 - 42292 + | hypothetical protein Ctha_0031 42575 - 44311 + | DNA polymerase III, epsilon subunit TERM 52 44711 - 44682 - g 72 -5 -4.62471 | gap 2 TGCAATCGGGAAAAA GCGTGGCG-C-TCG TGAG CGATGCCGGCACGC CCGTTATTTCCGACC TERM 53 44719 - 44731 + G 100 -5.5 -5.95166 | CGGCACGCCCGTTAT TTCCG ACC CGGGA TTTTTTTTGGTTCGC Ctha_0032 44426 - 45169 + | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Ctha_0033 45156 - 46010 + | pantoate/beta-alanine ligase Ctha_0034 46157 - 46942 + | class II aldolase/adducin family protein Ctha_0035 47180 - 47467 + | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 54 47472 - 47460 - f 74 -9.1 -3.51976 | overlap 47448 47456 AAGTGCCGAAAGTAA TCGGC TGA GCCGA AACGCTTACGGACAA Ctha_0036 47492 - 47785 + | protein of unknown function DUF167 Ctha_0037 47804 - 47917 + | hypothetical protein TERM 55 47962 - 47993 + T 91 -8.8 -4.91109 | opp_overlap 47963 47967, overlap 47963 47967 GTATTTTAGAAAAAA ATAAAGCTCCCGAA GTTT TTTGGGAGCTTTGC TTTTTATCGTCCGAA TERM 56 47963 - 47992 + T 90 -12.3 -3.54183 | opp_overlap 47963 47967, overlap 47962 47967 TATTTTAGAAAAAAA TAAAGCTCCCGAA GTTT TTTGGGAGCTTTG CTTTTTATCGTCCGA TERM 57 47992 - 47963 - T 100 -7.9 -5.626 | opp_overlap 47962 47963 47967, overlap 47967 TATTTTAGAAAAAAA TAAAGCTCCCGAA GTTT TTTGGGAGCTTTG CTTTTTATCGTCCGA TERM 58 47988 - 47967 - T 100 -8.7 -5.27709 | opp_overlap 47967 47963 47962, overlap 47963 TTAGAAAAAAATAAA GCTCCCGAA GTTT TTTGGGAGC TTTGCTTTTTATCGT TERM 59 47967 - 47988 + T 90 -10.9 -4.3902 | opp_overlap 47963 47967, overlap 47963 47962 TTAGAAAAAAATAAA GCTCCCGAA GTTT TTTGGGAGC TTTGCTTTTTATCGT Ctha_0038 50674 - 48062 - | hypothetical protein TERM 60 48482 - 48459 - G 70 -2.4 -4.93877 | GGCGAGGAAAGAAAA GCCGTTTCAC GCGG ATTAAACGAC GAGCTTTGAATCGCC TERM 61 50399 - 50410 + g 79 -4.4 -5.17576 | opp_overlap 50396 AGGAATCCAAAGCGG GAAG AGGC CTTC TTTTTTGGCTTCCTC Ctha_0039 51775 - 50897 - | integrase domain protein SAM domain protein TERM 62 51486 - 51496 + g 74 -5.4 -4.67038 | ACTTTTTTGGCTGGA TTGG TTG CCAA TTTTCCTTTTGCCAC TERM 63 51876 - 51900 + r 79 -7.2 -4.61527 | opp_overlap 51876 TTACAAAATAAAAAA GGCATTATGA AAATA TCACAATGCC TTTTTAAAAACTTTT TERM 64 51900 - 51876 - R 100 -9.4 -5.86976 | opp_overlap 51876 TTACAAAATAAAAAA GGCATTATGA AAATA TCACAATGCC TTTTTAAAAACTTTT Ctha_0040 52480 - 51926 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 65 52858 - 52830 - H 73 -3.8 -5.10077 | overlap 52845 AAACATCTTAAAAAA TCTGCGCTTAGC CAATT GCTCAGCAAAGA AAAATAAACCACACC TERM 66 53564 - 53553 - g 74 -3.6 -5.00895 | GCCATTACAGAAAAA GCCA TGCG CGGC GAAATTGATTTCACT Ctha_0041 52875 - 54086 + | phosphoserine phosphatase SerB TERM 67 54124 - 54143 + T 81 -9.3 -3.93369 | opp_overlap 54124 AATCCCAATAAAAAA GGGCTTG CCGAAA CAAGCCC TTTCCTTACAATTAA TERM 68 54143 - 54124 - T 100 -10 -5.4756 | opp_overlap 54124 AATCCCAATAAAAAA GGGCTTGC CGAA ACAAGCCC TTTCCTTACAATTAA Ctha_0042 56380 - 54191 - | glutamine synthetase catalytic region TERM 69 55506 - 55530 + g 76 -4.9 -4.7373 | overlap 55504 55507 GCAATTTCAAACTGA TGCGGTGCAAC TTC GTTGTGACGCG TTTTTGCTGGAATGC Ctha_0043 56969 - 56451 - | transcriptional regulator, AsnC family TERM 70 57475 - 57459 - g 79 -7.9 -4.4078 | CCGGCTGAACCAAAA GCTGCTG CAT CAGCTGC CGCTCCATCTCAAGG Ctha_0044 57360 - 57635 + | hypothetical protein TERM 71 57691 - 57662 - f 84 -7.9 -4.82901 | opp_overlap 57668, overlap 57663 57668 TCTCTTGCAGAAAAA CTAAAAGCCCACA ACAA TGTGGGCTTTTTT TTCTGGCTCGTGTTT TERM 72 57690 - 57663 - f 85 -11.4 -3.49419 | opp_overlap 57668, overlap 57662 57668 CTCTTGCAGAAAAAC TAAAAGCCCACA ACAA TGTGGGCTTTTT TTTCTGGCTCGTGTT TERM 73 57685 - 57668 - f 91 -11.3 -4.82678 | opp_overlap 57668, overlap 57663 57662 GCAGAAAAACTAAAA GCCCACA ACAA TGTGGGC TTTTTTTTCTGGCTC TERM 74 57668 - 57685 + F 100 -11.3 -5.96219 | opp_overlap 57668 57663 57662 GCAGAAAAACTAAAA GCCCACA ACAA TGTGGGC TTTTTTTTCTGGCTC Ctha_0045 57817 - 58239 + | hypothetical protein TERM 75 58310 - 58281 - f 85 -5.8 -5.46657 | gap 1, overlap 58283 TAGTTCAACAAAAAA TG-GCAATCTCGC GCGAA GTGAGATTGCACA GAGAAAAACTATTTC TERM 76 58753 - 58741 - g 73 -7.7 -4.18763 | AACAAACGCTTAAAA CAACC GAA GGTTG GACTCAATATCAATT Ctha_0046 58353 - 59312 + | hypothetical protein TERM 77 59337 - 59373 + F 74 -5.9 -4.56597 | gap 1, opp_overlap 59345, overlap 59345 AAGGTTATTGAAACT CACGATAAGCCGCCTG CTCGTT TGGGCGGCTT-TCCTG TTTTTCGCCGCCGCG TERM 78 59345 - 59366 + F 73 -7.2 -4.13748 | opp_overlap 59345, overlap 59337 TGAAACTCACGATAA GCCGCCTG CTCGTT TGGGCGGC TTTCCTGTTTTTCGC TERM 79 59386 - 59407 + F 74 -10.1 -2.60032 | overlap 59375 59374 59385 59384 CTGTTTTTCGCCGCC GCGCCGCAA AGTT TTGCGGCGG AATTTTTAAGCGAAA Ctha_0048 59645 - 61552 + | TonB-dependent receptor TERM 80 62084 - 62065 - g 70 -5 -4.4017 | CGAATCGGTACAAAA TCCAGCAA AATA TTACCGGA ACAATGTTGCAAGCA Ctha_0049 61814 - 62803 + | UDP-glucose 4-epimerase Ctha_0050 62838 - 63272 + | hypothetical protein Ctha_0051 63367 - 64311 + | cysteine synthase Ctha_0052 64419 - 64784 + | hypothetical protein Ctha_0053 64781 - 65209 + | Mov34/MPN/PAD-1 family protein TERM 81 65786 - 65759 - g 81 -12.2 -3.29471 | overlap 65761 65764 CTTTCACCAGAGGAA CACGATCATGAT GACG ATCATGATCATG ACCATCATCACGACT TERM 82 65803 - 65761 - g 81 -12.3 -3.214 | gap 1, overlap 65759 65764 TTCACCAGAGGAACA CGA-TCATGATGACGATCAT GATC ATGACCATCATCACGACTCG AATGAAACCACCTTT TERM 83 65799 - 65764 - g 79 -12.8 -2.79589 | overlap 65759 65761 ACCAGAGGAACACGA TCATGATGACGATCAT GATC ATGACCATCATCACGA CTCGAATGAAACCAC Ctha_0054 65426 - 65959 + | Dinitrogenase iron-molybdenum cofactor biosynthesis protein TERM 84 65984 - 66008 + T 100 -9.3 -5.28481 | opp_overlap 65984 TCTTGAAAAGAAAAA GGCTACCAGAA TAT TTTTGGCAGCC TTTTTTCGTTAGCTA TERM 85 66008 - 65984 - T 100 -9.3 -5.45802 | opp_overlap 65984 TCTTGAAAAGAAAAA GGCTACCAGAA TAT TTTTGGCAGCC TTTTTTCGTTAGCTA Ctha_0055 67090 - 66017 - | recA protein Ctha_0056 67783 - 67181 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 86 67379 - 67358 - G 82 -7.3 -4.7497 | gap 1 TTTATCGATCAAAAA CGCTTCTGGC GTA ACC-GAAGCG CCATACATATCGGCC Ctha_0057 68830 - 67805 - | NAD-dependent epimerase/dehydratase Ctha_0058 69339 - 68830 - | biotin/lipoyl attachment domain-containing protein TERM 87 69018 - 69045 + g 85 -3.4 -5.56673 | gap 1, opp_overlap 69013 69017 TTACAACCAAGCCAG GCATCG-GCGATT TTA AATCACCCGACGC TTTTTTGTTCTCAAT TERM 88 69334 - 69350 + g 100 -3.8 -5.88471 | AACCATTGCTTTATA TTTCAT GCTAA ATGAAA TTTTTTTTCCTGATA Ctha_0059 70080 - 69520 - | co-chaperone Hsc20 TERM 89 69570 - 69580 + g 76 -4 -5.0133 | TTCGGAGAGACGAGC GAAT GTA ATTC TTTTTTAACAGGATG TERM 90 71282 - 71253 - g 70 -2.1 -5.00884 | overlap 71255 ACTTTTGGGAAAAAA TGTGCCAAAACGA GAAT TGGATTTGGCAAA AGCACAACTCAAAGG Ctha_0060 70222 - 71511 + | processing peptidase Ctha_0061 71657 - 72571 + | heat shock protein DnaJ domain protein TERM 91 72644 - 72600 - T 100 -6.6 -5.75945 | gap 1, opp_overlap 72605, overlap 72584 ATTTTTGAAAAAAAA CAAAATCCTATCGG-TGAGAA AAAT CTCGTAGCCGATAGGATTTCG CTGTCAACCGCAGGA Ctha_0062 73231 - 72680 - | NADH-quinone oxidoreductase, chain I TERM 92 73431 - 73401 - H 72 -6.9 -3.91506 | opp_overlap 73402, overlap 73399 73402 CTATTTTTAAAAAGA TGTAGAGACAAGA AAGCG CCTTGCCTCTACT TTTTGGCTTATAACT TERM 93 73430 - 73402 - H 77 -10.4 -2.94422 | opp_overlap 73402, overlap 73401 73399 TATTTTTAAAAAGAT GTAGAGACAAGA AAGCG CCTTGCCTCTAC TTTTTGGCTTATAAC TERM 94 73402 - 73430 + H 84 -7.5 -4.78149 | opp_overlap 73402 73401 73399 TATTTTTAAAAAGAT GTAGAGACAAG AAAGCGC CTTGCCTCTAC TTTTTGGCTTATAAC TERM 95 73675 - 73700 + G 75 -9.7 -3.57144 | TGAGATAGAGGGTTT TTCGTTGCCGA GCTT TCGGCAGCGCA TTTCGGAGTCCGCGA TERM 96 73706 - 73726 + G 70 -9 -3.34522 | gap 1, overlap 73710 CGGCAGCGCATTTCG GAGTCCGCG ACGA CGCGG-CTC TTGGTTCAAAAATGT TERM 97 73770 - 73750 - g 77 -10.4 -3.43689 | overlap 73751 AAAATGTGAGGAGAA CGCGCCGA GCGTT TCGGCGCA GGGCGTCTACGGGTC TERM 98 73769 - 73751 - g 76 -11.7 -2.65491 | overlap 73750 AAATGTGAGGAGAAC GCGCCGA GCGTT TCGGCGC AGGGCGTCTACGGGT TERM 99 74199 - 74209 + G 72 -3.2 -5.00616 | GCGCGGCCTCGCCCG TTCG CAT CGAG TTTTTTGGCGACGAG Ctha_0063 73622 - 76954 + | transcription-repair coupling factor Ctha_0064 77566 - 77102 - | iojap-like protein Ctha_0065 78401 - 77691 - | peptidase M22 glycoprotease TERM 100 78291 - 78301 + g 80 -6.8 -4.62471 | opp_overlap 78290 78291 AATCAGCGGCAAAAT CTGC TCG GCAG TTTTTCGCCATTCCG Ctha_0066 78879 - 78436 - | protein of unknown function UPF0079 Ctha_0067 79553 - 78966 - | hypothetical protein TERM 101 78997 - 79007 + g 74 -5.4 -4.58395 | AGTTCACCTGATTTG TTCC AGC GGAA TTTTTCCAAAATGCG TERM 102 79654 - 79670 + G 72 -2.9 -5.00616 | overlap 79655 GGCGCACGCCCAGCC GGCCTTT GCT GAAGGCG TTTTTTCCACAGGCG TERM 103 80083 - 80102 + G 85 -6.4 -5.1861 | gap 1, overlap 80078 CACGATTTATCTTCC GCCGGCGCA AGT TGC-TCGGC TTTTTTCATCGTGGC Ctha_0068 79601 - 81391 + | N-acetylmuramoyl-L-alanine amidase TERM 104 81836 - 81851 + G 77 -3.3 -5.09426 | ACTCATCAACGATCG GATCT CTTTTA AGATC TTTTTTGGACTTGAG TERM 105 82309 - 82280 - g 100 -4.1 -5.95166 | GCTAACGAAAAAAAA GCCGGCGGAAAAA AGCC CTACGCCGCCAGC CAGCCCGGCACCAAA Ctha_0069 81609 - 83069 + | hypothetical protein Ctha_0070 83073 - 84065 + | hypothetical protein Ctha_0071 85170 - 84283 - | Radical SAM domain protein Ctha_0072 85805 - 85311 - | PEBP family protein TERM 106 85530 - 85551 + g 71 -7.1 -4.08064 | TTCTCGCGTTCCCTC CGGCAAGGC CATC GCCGCGCCG TTTTGCGGAAAGCTT Ctha_0073 86375 - 85809 - | nitroreductase TERM 107 86131 - 86147 + g 73 -8 -4.11216 | opp_overlap 86128 86131 ATGATAATGTAAGCA GAAGGC CGCTC GCCTTC TTTTGGGCCTGGCCA Ctha_0074 86989 - 86372 - | hypothetical protein Ctha_0075 87778 - 87128 - | Haloacid dehalogenase domain protein hydrolase Ctha_0076 88178 - 87858 - | KaiB domain protein Ctha_0077 89921 - 88197 - | putative circadian clock protein, KaiC Ctha_0078 92736 - 90190 - | hypothetical protein TERM 108 92074 - 92059 - G 79 -4.6 -5.14563 | opp_overlap 92062, overlap 92062 TTTGGTAGGAAAAAA CACCGG ATTG CCGCTG AAGCGAGATCCGTCA TERM 109 92607 - 92618 + g 75 -3 -5.18561 | ATTTATCGCGTTCCT TATC GATG GATA TTTTTTCAATGTTTG Ctha_0079 93586 - 92843 - | protein of unknown function DUF558 TERM 110 93035 - 93023 - G 72 -4.9 -4.72272 | GCCTCCGATTAAAAA CAAAA TGC TTTTG CCGGAAAAACCTTGT TERM 111 93378 - 93390 + g 73 -7.7 -4.14243 | GGCGCAGGCTTTTTT TCCTG ACT CAGGA TTTTCAGCTCGGCTG TERM 112 93393 - 93407 + g 84 -8.6 -4.61633 | TCCTGACTCAGGATT TTCAGC TCG GCTGAA TTTTTGCCAATCTGT Ctha_0080 93761 - 94318 + | hypothetical protein TERM 113 94343 - 94388 + T 77 -10.6 -3.02434 | overlap 94340 ACAGCGCACGCCGAT CTTTCTGGAAACCCTGAAAA ACCGGA TCTACATGGTTTCCAGAAAG TGCTTTAGTTCCGCT Ctha_0081 94867 - 94370 - | GCN5-related N-acetyltransferase TERM 114 94960 - 94943 - R 100 -2.1 -6.34424 | gap 1 TCGGCAAAAAAAAAA TTTGCAAG GCA CTT-CAAA AAAACAGGTCAGTTG Ctha_0082 95569 - 95051 - | hypothetical protein Ctha_0083 95932 - 97467 + | hypothetical protein Ctha_0084 98815 - 97541 - | protein of unknown function DUF214 TERM 115 98864 - 98897 + r 100 -25.5 -3.6579 | opp_overlap 98864 98871 TGCCATTTAGAGAGA GTAGGAAGCGCCGCA TATA TGCGGCGCTTCCTAC TTGTTAGAATAGGTT TERM 116 98897 - 98864 - R 100 -25.5 -3.0094 | opp_overlap 98864, overlap 98871 TGCCATTTAGAGAGA GTAGGAAGCGCCGCA TATA TGCGGCGCTTCCTAC TTGTTAGAATAGGTT TERM 117 98890 - 98871 - R 100 -15 -3.27259 | opp_overlap 98864, overlap 98864 TAGAGAGAGTAGGAA GCGCCGCA TATA TGCGGCGC TTCCTACTTGTTAGA Ctha_0085 99663 - 98926 - | hypothetical protein Ctha_0086 100519 - 99794 - | hypothetical protein TERM 118 100227 - 100237 + g 70 -2.4 -5.0538 | TTCAGGCCACCGGTT ACCG CTG CGGC TTTTTTCAAATCCAA TERM 119 100942 - 100953 + H 81 -7.2 -4.72986 | opp_overlap 100941, overlap 100941 100941 CTTGTAGAAAAATTG CGCC CGGC GGCG TTTTTCGTAGGGATA TERM 120 101096 - 101118 + G 79 -2.8 -5.40072 | gap 1 AACTGGACGGTTCTT TCGCT-CTT AAAAGC AAGCAGCGA TTTTTTTGCACAAAA Ctha_0087 101066 - 101950 + | protein-(glutamine-N5) methyltransferase, release factor-specific TERM 121 102536 - 102547 + G 72 -3 -5.00616 | CTCATTGTCCATCGG GTTT CTCG AAAC TTTTTTGGAGAAGCG TERM 122 102895 - 102920 + G 80 -6.9 -4.57569 | opp_overlap 102897, overlap 102897 TCAAAACCACTACAT CAGCTTGTTTA TGGT TAAGCAAGCGG TTTTTGCAAGAATCA Ctha_0088 101963 - 103159 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 123 103225 - 103207 - T 100 -11.7 -5.46657 | GACTGCAACAAAAAA GGCGACC TTGGT GGTCGCC CTTACAAAACAGCCT Ctha_0089 103970 - 103266 - | Abortive infection protein TERM 124 103492 - 103472 - G 78 -6.1 -4.62984 | overlap 103474 TGACCATATACAAAA TCGTGGTGA TTG CCACCACCA AATGTTTGTTCAAGC TERM 125 104218 - 104196 - R 100 -13.4 -4.06055 | opp_overlap 104205, overlap 104207 ATGCCGGAAAGCAAA GGGCAGACAC ACG GGGTCTGCCC CGCCTTCAATCGCCG TERM 126 104220 - 104207 - R 73 -9.5 -3.01708 | opp_overlap 104205, overlap 104196 CAAAGGGCAGACACA CGGGG TCTG CCCCG CCTTCAATCGCCGCT Ctha_0090 106278 - 104224 - | DNA ligase, NAD-dependent TERM 127 104284 - 104298 + g 73 -7.8 -4.17089 | overlap 104294 GGTAACGATTTTCAC GCCGAG CTT TTCGGC TTTTGCCAATTTGCC TERM 128 104441 - 104481 + g 77 -3.8 -5.26316 | gap 1, opp_overlap 104442, overlap 104442 AGCGAGCCGGTGAAA ACGACCGTCATGCCGGCAA AGGT TTGC-GGCGCGTCGGGCGA TTTTTTGTCCGATGC TERM 129 104480 - 104442 - G 71 -7.3 -4.08767 | gap 1, opp_overlap 104442 104441 GCGAGCCGGTGAAAA CGACCGTCATGCCGGCAA AGGT TTGC-GGCGCGTCGGGCG ATTTTTTGTCCGATG TERM 130 104850 - 104826 - G 73 -4.2 -4.77173 | gap 1, overlap 104827 104849 TTTCGATAAAATAAA GGTCGC-CCGG ATCG CCGATGAGACC CGCGCCGAGCAACTG TERM 131 105405 - 105421 + g 83 -10.1 -4.12188 | overlap 105408 CGTCGATTTCGTAGG CGAGCGC ATC GCGCTTG TTTTCCCACTCGTCC TERM 132 105408 - 105418 + g 76 -8.2 -4.18506 | overlap 105405 CGATTTCGTAGGCGA GCGC ATC GCGC TTGTTTTCCCACTCG TERM 133 105665 - 105683 + g 70 -2.3 -5.03314 | overlap 105666 105679 GCAAATTGCTCGGAC TCGTCGC GCTCG GCGTTGA TTTTTTCAAAATCCG TERM 134 105903 - 105919 + g 73 -10.1 -3.46068 | opp_overlap 105882 105879 105902 105901 105897, overlap 105901 105904 CACGATAAATCAAGC TGACGGC CAC GCCGTCG TATTTGAGTTCCGCC TERM 135 105904 - 105918 + g 73 -11.4 -2.6732 | opp_overlap 105882 105879 105902 105901 105897, overlap 105903 105901 ACGATAAATCAAGCT GACGGC CAC GCCGTC GTATTTGAGTTCCGC TERM 136 106010 - 105995 - G 76 -4.6 -5.00884 | opp_overlap 105973 ACGCGGGCTAAAAAA TCGCCG AGTT CGCCGA GGTTGTAGGTGTTCG TERM 137 106232 - 106250 + g 83 -8.8 -4.28432 | TTATGCTCGTTGATT TCCCTGCG CAA CGCACGGA TTTTCGCTTCAGCTT TERM 138 107377 - 107407 + G 79 -9 -4.07746 | overlap 107355 107378 GTGACAGGCGCTGCG CCGCCAGTGAAACG CGC CGTTTTAATGGCGA TTGTCTTTTTAGGCA TERM 139 107378 - 107406 + G 80 -12.5 -3.03925 | overlap 107355 107377 TGACAGGCGCTGCGC CGCCAGTGAAACG CGC CGTTTTAATGGCG ATTGTCTTTTTAGGC Ctha_0091 106438 - 108648 + | ComEC/Rec2-related protein Ctha_0092 108664 - 108981 + | HesB/YadR/YfhF-family protein TERM 140 109053 - 109007 - T 100 -10.3 -5.24989 | opp_overlap 109011, overlap 109008 GCATATATTAAAAAA GCAAGGCTGCCCAAAGTTT GACGAAAAA ACACTTTGAGCAGCCTTGT GAAAGTCAAAGCCCA TERM 141 109052 - 109008 - T 100 -13.8 -3.73909 | opp_overlap 109011, overlap 109007 CATATATTAAAAAAG CAAGGCTGCCCAAAGTTT GACGAAAAA ACACTTTGAGCAGCCTTG TGAAAGTCAAAGCCC Ctha_0093 110060 - 109059 - | KpsF/GutQ family protein Ctha_0094 112862 - 110220 - | DNA mismatch repair protein MutS TERM 142 110363 - 110373 + g 83 -2.4 -5.69262 | GCAAATCTTCTTTCG GCAC GAT GCGC TTTTTGTTTTTCTGC TERM 143 111249 - 111236 - G 74 -3.8 -5.02074 | GGAGCGCCGAAAAAA GCTC CTGCTC GAGC GTGATGCGCCGCTCT TERM 144 111310 - 111339 + g 70 -2.1 -4.93296 | gap 1, overlap 111316 TTCAAAATCGGAATC GTATAGCGTTCGGC ATT GACGAGCGTT-TGC TTTTTCTCATAATAA TERM 145 111316 - 111334 + g 75 -6.6 -4.3902 | overlap 111310 ATCGGAATCGTATAG CGTTCGGC ATT GACGAGCG TTTGCTTTTTCTCAT Ctha_0095 112996 - 113430 + | hypothetical protein TERM 146 113614 - 113591 - g 79 -8.3 -4.20354 | AACGGAAGGCGAAAA GCTTTTTGT TCCGAC ACAAAAAGC AGAAGCAGGCGACAC Ctha_0096 113535 - 113831 + | ribosomal protein L21 TERM 147 113896 - 113882 - g 79 -4.2 -5.24531 | ATGGCTCATAAAAAA GGTGGA GGT TCTACC AAAAACGGTCGCGAT Ctha_0097 113867 - 114121 + | ribosomal protein L27 TERM 148 114169 - 114151 - f 78 -7.4 -4.38712 | opp_overlap 114143 114151 TGCATCTTGATAAAA GCCGAC TCGATAC GTCGGC TTTTTTTATACATTT TERM 149 114151 - 114169 + F 100 -7.4 -5.68039 | opp_overlap 114151, overlap 114143 TGCATCTTGATAAAA GCCGAC TCGATAC GTCGGC TTTTTTTATACATTT Ctha_0098 114424 - 115356 + | malate dehydrogenase, NAD-dependent TERM 150 115398 - 115419 + T 100 -10.1 -5.27335 | opp_overlap 115398 CCTTGAGGGAAGAAA GCGTCCGGT ATTT ATCGGGCGC TTTTTATTTGAGAAA Ctha_0099 117411 - 115474 - | peptidase M61 domain protein TERM 151 116807 - 116819 + g 80 -6.3 -4.81249 | AGCTCATCATAATTT TTTGC AAG GCAAA TTTTTGAATTTGGCG TERM 152 116957 - 116969 + g 83 -6.3 -5.00616 | GCGTAGCCGTAGCGG CCATT GAG AATGG TTTTTTCCGGCCAAA TERM 153 117172 - 117148 - G 81 -4.9 -5.22039 | overlap 117140 TCCAAACTGAAAAAA TTCATACGCGC CCG GCGCCCAGGAA GGCATCGAAAACTTG TERM 154 118164 - 118187 + G 79 -8 -4.4267 | overlap 118165 TTTCCATCGGCATGG CCGATGCGGC GCTG GCCGCCTCGA TTTTCCATTTTCGCC TERM 155 118165 - 118186 + G 77 -11.5 -3.24879 | overlap 118164 TTCCATCGGCATGGC CGATGCGGC GCTG GCCGCCTCG ATTTTCCATTTTCGC Ctha_0100 117509 - 118264 + | imidazoleglycerol phosphate synthase, cyclase subunit TERM 156 118325 - 118348 + F 86 -11.1 -4.06419 | opp_overlap 118325 118327 118329 118331 TTTTCCCAAACGATA TAGAGACGC ACTGGC GCGTCTCTA TTATTTATGAGAAAA TERM 157 118348 - 118325 - f 82 -11.8 -3.00525 | opp_overlap 118325, overlap 118327 118329 118331 TTTTCCCAAACGATA TAGAGACGCA CTGG CGCGTCTCTA TTATTTATGAGAAAA TERM 158 118346 - 118327 - f 76 -10 -3.05769 | opp_overlap 118325, overlap 118325 118329 118331 TTCCCAAACGATATA GAGACGCA CTGG CGCGTCTC TATTATTTATGAGAA Ctha_0101 118548 - 119687 + | hypothetical protein TERM 159 119800 - 119790 - f 78 -5.4 -5.06472 | ATACAAAGAATAAAA TCAG TTA CTGA AACCAGTTCAATTCA TERM 160 119968 - 119985 + G 80 -5.5 -4.9755 | opp_overlap 119968 119970, overlap 119962 119962 119970 CTTTGCTATGAAAAA GAGACTG ATGC CAGTCGC TTTTTACTTCTGTCT TERM 161 119985 - 119968 - g 74 -5.5 -4.72272 | opp_overlap 119968 119962 119962 119970, overlap 119970 CTTTGCTATGAAAAA GAGACTG ATGC CAGTCGC TTTTTACTTCTGTCT TERM 162 120216 - 120197 - g 76 -4.2 -5.06816 | ACGCTCGAAGAAAAA CCTGACTA TATT TTGCCAGG AAAATCTTGGAAAAT Ctha_0102 119915 - 120670 + | hypothetical protein TERM 163 120722 - 120748 + F 100 -10.2 -5.32944 | opp_overlap 120722 AGCCCCATAAAAAAA GGGAATTTCAAC GAA GGTGAAGTTCCC TTTTTTCGTTATGAG TERM 164 120748 - 120722 - f 100 -8 -5.61596 | opp_overlap 120722 AGCCCCATAAAAAAA GGGAATTTCAAC GAA GGTGAAGTTCCC TTTTTTCGTTATGAG Ctha_0103 121049 - 122260 + | Radical SAM domain protein TERM 165 122290 - 122318 + F 100 -14.6 -5.14563 | opp_overlap 122292 TTTCTCGAACTTCAA CAGCCGACGTCG CAACC CGAAGTCGGCTG TTTTTTCATCGCCAA TERM 166 122316 - 122292 - f 83 -11.4 -3.09492 | opp_overlap 122290 TCTCGAACTTCAACA GCCGACGTCG CAACC CGAAGTCGGC TGTTTTTTCATCGCC Ctha_0104 122453 - 122803 + | hypothetical protein Ctha_0105 122834 - 123151 + | iron donor protein CyaY Ctha_0106 123200 - 125125 + | peptidase TERM 167 125480 - 125463 - g 80 -5.6 -4.92363 | AAACATCGATAAAAA GCGAAT GCTCAT ATTCGC AGCAAGTCATGGCAT TERM 168 126076 - 126093 + G 71 -6.9 -4.16284 | TACCGCTTGCAGATG CCCGTGG TCGT CGACGGG TTTATTGCCACATCT Ctha_0107 125311 - 126399 + | nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase Ctha_0108 126409 - 127206 + | cobalamin 5'-phosphate synthase TERM 169 127754 - 127742 - g 76 -9.1 -3.68351 | opp_overlap 127741 127739 127742 CTTGCATTATTTAAA CGACC GAT GGTCG CTGTTTCGATTAACT Ctha_0109 127191 - 127781 + | Phosphoglycerate mutase TERM 170 128749 - 128734 - g 73 -4 -4.81851 | ACTGAAAGCCAAAAA GCAAAA TTCG TTTCGC AAGCTATCCGGCGCG Ctha_0110 127799 - 128830 + | hypothetical protein TERM 171 128875 - 128901 + T 100 -14.5 -4.31166 | TTGGGTTATCTCGAA GGCGCTGATTC CAAAA GGATCAGCGCC TTTCTCTATTTATGC Ctha_0111 129936 - 128986 - | Radical SAM domain protein TERM 172 129730 - 129712 - G 71 -7.5 -4.00468 | overlap 129722 ACCAGAACCGACAAA GGAAATC CAATC GATTTCC GAAGGCTTGTGCTGA TERM 173 130055 - 130025 - R 72 -7.7 -3.79788 | opp_overlap 130025, overlap 130021 TTAAAAAACAAGCAA GTGGCAGAAAA TGCGCTCTG TTTCCTGCCAC TTTAACGAATTCCTG Ctha_0112 132453 - 130156 - | TonB-dependent receptor plug Ctha_0113 132647 - 133354 + | cytidylate kinase TERM 174 133899 - 133886 - g 73 -2.4 -5.22039 | opp_overlap 133887, overlap 133887 GTGAAACTGAAAAAA TCGA TTTTTC TCGA AAAACCGTGCTCTTT Ctha_0114 133423 - 134370 + | hydroxymethylbutenyl pyrophosphate reductase TERM 175 134459 - 134449 - f 77 -6.8 -4.58308 | GAGGAAGGAAATAAA CTGC ATG GCAG CATCACAAACAACTC TERM 176 135757 - 135741 - g 76 -4.4 -4.99043 | CTTGGACAAAGAAAA TTCGCC ATCCA AGCGAA ATCGTCAAGAAAAAT TERM 177 135783 - 135772 - g 72 -3 -5.08088 | AATCGTCAAGAAAAA TCAA GAGC TTGA TGTGAAGGTTCTCAA Ctha_0115 134453 - 136303 + | ribosomal protein S1 TERM 178 136338 - 136365 + T 100 -12.8 -5.40072 | overlap 136340 CATCACGCTATTTAT GAGGGGCAATCA AAAT TGATTGCCCCTA TTTTTTTACCCGGAA TERM 179 136340 - 136363 + T 100 -15.4 -4.34482 | overlap 136338 TCACGCTATTTATGA GGGGCAATCA AAAT TGATTGCCCC TATTTTTTTACCCGG Ctha_0116 137374 - 136409 - | GTP-binding protein Era TERM 180 136624 - 136634 + g 72 -3.2 -4.95806 | AACGCAGCACATCTT TTCG CGC CGGA TTTTTCTCGTAATTT TERM 181 137871 - 137888 + G 93 -9.9 -4.652 | TTCGACATTTTACCA CCGCAAT CGGC ATTGCGG TTTTTCCCGTCATTT TERM 182 138349 - 138366 + G 75 -2.6 -5.19275 | GCAGCTTCGCTTTAT TCCGGC GCAATG GACGGA TTTTATTTTCTGCGT Ctha_0117 137456 - 138688 + | rod shape-determining protein RodA Ctha_0118 138696 - 139592 + | protein of unknown function DUF6 transmembrane Ctha_0119 139971 - 139639 - | protein of unknown function DUF202 Ctha_0120 141076 - 140057 - | hypothetical protein TERM 183 140302 - 140285 - G 72 -4.7 -4.56597 | opp_overlap 140294 140300 GCGCTGGTTGAAAAA GCCCGGC AAGC GCGAGGC CTGCGTAACCCGCGC Ctha_0121 144388 - 141356 - | molydopterin dinucleotide-binding region Ctha_0122 146058 - 144415 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 184 144487 - 144471 - G 70 -2.2 -4.97405 | ATTCATAAAAATAAA GGCC GACGAGCAT GGCC ACACCGCCTAACGCC TERM 185 144556 - 144538 - G 70 -2.3 -4.94972 | overlap 144539 TAGCACAAGCAAAAA CGCCGCA AGGTG TCCGACG GCAATCGCGCCGCCC TERM 186 144612 - 144626 + g 76 -9.2 -3.76952 | GAATCATCTTATGCG CGGCGG CGG CTGCCG TTTCGCTTGCATGAG TERM 187 145672 - 145684 + g 71 -6.9 -4.08216 | opp_overlap 145659 AACGACCACGCAGGC CGGCT CGA GGCCG TTTTCCAAACGATGC Ctha_0123 146285 - 146067 - | hypothetical protein Ctha_0124 147424 - 146315 - | radical SAM domain protein Ctha_0125 148434 - 147406 - | biotin/lipoate A/B protein ligase Ctha_0126 149549 - 148449 - | Radical SAM domain protein TERM 188 148809 - 148821 + g 73 -10.5 -3.05384 | ATGTTGCATCACGGT CCCCG GCT CGGGG TTGAATGAGAAAAGG Ctha_0127 150746 - 149781 - | Radical SAM domain protein TERM 189 149816 - 149828 + g 79 -9.1 -4.06502 | opp_overlap 149815 149814 AGGCGTTGATAAATC GGGCT TGA AGCCC TTTGCTTTCGGCATA TERM 190 150433 - 150404 - G 72 -6.4 -4.21768 | gap 2 GAATGAACTTCAAAA GCGGCA-CG-CTGC CCGC GCGGTCGCTGCCGC CCGAAATCAACACGC TERM 191 150563 - 150533 - G 71 -6.8 -4.08216 | overlap 150536 150560 GCATTCCGCGCAAAA GCACCTTACCGCAA TGC TTGCAGTTAAGGGC GCAATCCGTTCCCGT Ctha_0128 151884 - 150736 - | biotin/lipoate A/B protein ligase TERM 192 151803 - 151778 - G 75 -11.1 -3.08934 | GTATATATTCTAAGA GTCGGTTCGGA CGTG CCCGCACCGAC GCGCCTTGCCAGCGT Ctha_0129 152345 - 151896 - | glycine cleavage H-protein TERM 193 152497 - 152476 - R 83 -11.6 -3.21276 | opp_overlap 152464, overlap 152474 152486 GGTCGTGTGAGAAGA GGGCAGAC AAGTAG GTCTGCCC CTACCTCAGATGTTA TERM 194 152519 - 152550 + r 78 -10.2 -3.24924 | overlap 152517 152520 CAGATGTTATTTGTT TTGTAGGGGCGAAA AATT TTTCGCCCTTACGC TGTTATGCCTGCCAA TERM 195 152520 - 152549 + r 91 -13.7 -2.5474 | overlap 152519 152517 AGATGTTATTTGTTT TGTAGGGGCGAAA AATT TTTCGCCCTTACG CTGTTATGCCTGCCA TERM 196 152623 - 152579 - R 74 -5 -5.01732 | AACCCTGGCAAAAAA TTTTGCCATCGGTCGTGG AAACAAAGA CCGCCGCCGATGACAAAA AAAAATGTCATTCTG Ctha_0130 155069 - 153030 - | protein of unknown function DUF224 cysteine-rich region domain protein TERM 197 153055 - 153065 + g 72 -8.2 -3.78597 | ACCGCTTCTTTTTTC GCCG CTT CGGC TTTGGATTGCTCCAT TERM 198 153124 - 153139 + g 71 -6.8 -4.08767 | ACGACCTTCAGCTTG CCTTCG TTGC CGGAGG TTTTGACCGCGTCGG TERM 199 154547 - 154529 - G 73 -4.4 -4.87626 | overlap 154530 CGGCAAGATGAAAAA CCGTGCCG AGC CAGCGCGA ACCGACATGAATCAA TERM 200 154863 - 154880 + g 72 -9.1 -3.5764 | opp_overlap 154852 154863 AAAGGCGTGGAACAA GCTTGCC AGCG GGCGAGC TTTGAAGATCGGCTT TERM 201 154954 - 154966 + g 81 -4.7 -5.10497 | overlap 154944 154955 AAATTGTCGCTGCGG TCGGC AGA GCCGC TTTTTTGCATCAGTT TERM 202 155087 - 155137 + r 86 -9.4 -4.47271 | gap 1, opp_overlap 155089 155091 155095, overlap 155089 155091 TTATTCTCCTTATTA TATATCAACAAAAAGAGAAG-GT GGGAGA ACGCTGCTCTTTTTGTTGATAAA TTTTGGTTAGGTTTG TERM 203 155089 - 155135 + r 85 -12 -2.55282 | gap 1, opp_overlap 155089 155091 155095, overlap 155087 155091 ATTCTCCTTATTATA TATCAACAAAAAGAGAAG-GT GGGAGA ACGCTGCTCTTTTTGTTGATA AATTTTGGTTAGGTT TERM 204 155135 - 155089 - R 86 -12 -2.78463 | gap 1, opp_overlap 155089 155087 155091, overlap 155091 155095 ATTCTCCTTATTATA TATCAACAAAAAGAGAAG-GT GGGAGA ACGCTGCTCTTTTTGTTGATA AATTTTGGTTAGGTT TERM 205 155091 - 155133 + r 74 -10.2 -2.80479 | gap 1, opp_overlap 155089 155091 155095, overlap 155089 155087 TCTCCTTATTATATA TCAACAAAAAGAGAAG-GT GGGAGA ACGCTGCTCTTTTTGTTGA TAAATTTTGGTTAGG TERM 206 155133 - 155091 - R 75 -10.2 -2.94099 | gap 1, opp_overlap 155091 155089 155087, overlap 155089 155095 TCTCCTTATTATATA TCAACAAAAAGAGAAG-GT GGGAGA ACGCTGCTCTTTTTGTTGA TAAATTTTGGTTAGG Ctha_0131 156102 - 155158 - | Electron transfer flavoprotein alpha subunit TERM 207 155336 - 155358 + g 71 -7 -4.09685 | opp_overlap 155335 155354 155355 AGTGCGATATAAACT TTCGGCTTGA CCT TCAAACCGGA TTTTCCGACCTGACG Ctha_0132 157148 - 156357 - | Electron transfer flavoprotein alpha/beta-subunit TERM 208 157432 - 157463 + r 90 -12.4 -3.41222 | opp_overlap 157450, overlap 157430 157433 AAGGTTTTATTTGAT TTGTAGGGGCGAAA AATT TTTCGCCCTTACGG TGTTTGCCGTTAGGG TERM 209 157433 - 157462 + r 91 -13.7 -2.64412 | opp_overlap 157450, overlap 157432 157430 AGGTTTTATTTGATT TGTAGGGGCGAAA AATT TTTCGCCCTTACG GTGTTTGCCGTTAGG TERM 210 157477 - 157498 + r 100 -11.6 -5.67063 | opp_overlap 157450 GGTGTTTGCCGTTAG GGGCGAAC CTACGT GTTCGCCC TTTTTTTATCCTACC Ctha_0133 158865 - 157579 - | protein of unknown function DUF224 cysteine-rich region domain protein TERM 211 157789 - 157767 - G 73 -11.2 -2.71712 | opp_overlap 157788, overlap 157766 GGCGTTCGCTCAAAT GCTCGTCGAC CGT GCCGCCGAGC CATTGGCCGCCGCCG TERM 212 157888 - 157906 + g 72 -8.8 -3.58726 | opp_overlap 157883, overlap 157884 GTTGATGAGATTGCG CGGCGCAT CGT ATTCGCCG TTATGTCTGCCGAGA TERM 213 158473 - 158487 + g 80 -7.1 -4.56597 | CTCGTCCGGCGTTTT GCCGT CAAGC ACGGC TTTTTCACGCGCCGA Ctha_0134 159621 - 158866 - | hypothetical protein TERM 214 159355 - 159367 + g 72 -9.1 -3.64703 | GATTTCCGCTTTAAG CGGCT CAA AGCCG TTTGCCTGAACAAAG TERM 215 159792 - 159817 + G 79 -3.2 -5.38054 | CTCTGCCTTTTTCCA TGTCAGCCTG CTTTGT CAGCCTGCCA TTTTTCTTTGTCAGC TERM 216 159935 - 159964 + G 72 -6.4 -4.31433 | CAGCCTGTCTTTTTC CATGTCAGCCTG CTTTGT CAGCCTGCCATG TTTCTTGTCAGCCTG Ctha_0135 159791 - 160057 + | hypothetical protein Ctha_0136 161229 - 160168 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ctha_0137 162430 - 161222 - | protein of unknown function DUF224 cysteine-rich region domain protein Ctha_0138 163209 - 162472 - | hypothetical protein TERM 217 163230 - 163250 + r 75 -8.3 -3.72152 | GTCTCCTTAAGTTTC TGTGTCCGA AAG TCGGACAAA TTCTGCTTTTAGTTC Ctha_0139 163505 - 163221 - | thioredoxin Ctha_0140 163970 - 163509 - | glycine cleavage H-protein Ctha_0141 164537 - 164163 - | DsrE family protein TERM 218 164581 - 164596 + H 80 -7.6 -4.4017 | opp_overlap 164580 TTGTTTTGAATGTAG TCGTGA AAAG TCACGA TTTTATCACAGTTGC TERM 219 164797 - 164821 + H 93 -10.1 -5.093 | TCATGGAATGCGACT TCATTTTTCCG GCG CGGAAAAACGA TTTTATTCTTTTGCG TERM 220 164837 - 164847 + H 70 -8.2 -3.37939 | overlap 164832 TTTTATTCTTTTGCG CGGC GCA GCCG TTCAGTTTTGCAATT TERM 221 165954 - 165968 + G 72 -2.8 -5.00616 | CGTTGTCAATCAAGC CGAAAA AGA TATTCG TTTTTTCCGCGAGCC Ctha_0142 164911 - 166122 + | DNA polymerase III, subunits gamma and tau Ctha_0143 166161 - 166742 + | hypothetical protein TERM 222 167863 - 167877 + G 73 -4.2 -4.87786 | GCATGTATATGCTCG CGATCG TCA CCATCG TTTTTCTACCATTAG Ctha_0144 167055 - 168035 + | Mg2 transporter protein CorA family protein Ctha_0145 168109 - 172587 + | signal transduction histidine kinase Ctha_0146 172592 - 172963 + | response regulator receiver protein Ctha_0147 174114 - 173041 - | putative adenylate/guanylate cyclase TERM 223 173413 - 173398 - G 77 -3.3 -5.10029 | ACGAATTTCAAAAAA GCATT TCAAGC AATGC GCGTCTTTCAACCCG TERM 224 173855 - 173844 - G 74 -7.2 -4.26938 | overlap 173845 CGGAGAAAAGAACAA CCGC CAAC GCGG CAAAAAAGAGATATA TERM 225 174304 - 174281 - R 78 -10.3 -3.05935 | ATATTTTGCATCTAA GGGAGCGAG GTAGAA CTCACTCCC TTACAAATGGAAGGC Ctha_0148 176404 - 174353 - | Oligopeptidase B Ctha_0149 177075 - 176620 - | transcriptional regulator, MarR family TERM 226 177162 - 177134 - R 100 -13.9 -4.93968 | opp_overlap 177134 AGCCAGAATCAAAAA GCCGACCCTTTCC GCT GGAAAAAGCCGGC TTTTTGCGAAACATA TERM 227 177134 - 177162 + r 79 -7.3 -4.57073 | opp_overlap 177134 AGCCAGAATCAAAAA GCCGACCCTTTCC GCT GGAAAAAGCCGGC TTTTTGCGAAACATA Ctha_0150 177777 - 177190 - | YceI family protein TERM 228 177738 - 177726 - G 80 -6.9 -4.57073 | CATCTGCGGCAAAAA GCGCC TTT GACGC CGTGAAAAGGAAAAC TERM 229 177904 - 177914 + H 71 -4 -4.91109 | TTGTAACATCTATTT TCTT AAA AAGA TTTTTCTACTGGAAA TERM 230 178009 - 178019 + H 77 -6.8 -4.57353 | AAAATTAAAATCCTA TCGC CAC GCGA TTTTCTCTCCTAACA Ctha_0151 178183 - 179349 + | 6-phosphofructokinase TERM 231 179848 - 179838 - f 76 -4 -5.30616 | GTAGGCAAACAAAAA TCAA CCG TTGA TACCCCTTTCTGTTA Ctha_0152 179963 - 180229 + | RNP-1 like RNA-binding protein TERM 232 180264 - 180231 - T 79 -9.9 -3.54459 | opp_overlap 180236, overlap 180236 GTAAGCGCTTTTAAA TAAAATGAAATATCA GATT TGATATTTCATTTTC AGTTCTCGGCATCTT TERM 233 180236 - 180259 + T 86 -9.8 -4.3208 | opp_overlap 180236 180231 CGCTTTTAAATAAAA TGAAATATCA GATT TGATATTTCA TTTTCAGTTCTCGGC TERM 234 180259 - 180236 - T 93 -9.8 -4.86731 | opp_overlap 180236, overlap 180231 CGCTTTTAAATAAAA TGAAATATCA GATT TGATATTTCA TTTTCAGTTCTCGGC Ctha_0153 183106 - 180386 - | exporter of the RND superfamily protein-like protein TERM 235 181179 - 181195 + g 71 -7.3 -4.1523 | AAGTGAACAAGACTT GCGAGAA TGC TTTTCGC TTGTTTGTCATTCGG TERM 236 182100 - 182080 - G 87 -9.7 -4.28361 | CCAACCCGAGCAAAA TCACCGCCA TCA TGGAGGTGA AAATATTCAGTTCAC TERM 237 182574 - 182562 - G 100 -3.4 -5.8187 | overlap 182566 GACCTAACAAAAAAA TCGA TCCCG TCGA GAAACATCACCGCAC TERM 238 182800 - 182823 + g 70 -2.4 -5.0925 | gap 1, overlap 182802 182802 GTTTTACGAAGGGTT TGC-CATCGGC GGA GTCGATGAGTG TTTTTAATTTTGGGG Ctha_0154 184418 - 183189 - | hypothetical protein TERM 239 184393 - 184383 - G 79 -2.4 -5.60993 | overlap 184384 TTCCTGACAAAAAAA TCGC ATA GCGC GCTCGGTTTTTTTTT Ctha_0155 185131 - 184415 - | hypothetical protein Ctha_0156 185830 - 185219 - | transcriptional regulator, TetR family TERM 240 185913 - 185893 - R 83 -5.4 -5.5074 | opp_overlap 185893 TAATGCAAGAAAAAA GCGTTGTC AAGTA GAAAACGC GTGTTTTTCTGAGAG TERM 241 185961 - 185982 + r 74 -5.8 -4.54727 | opp_overlap 185942 185962, overlap 185962 TTTTTAACAAAAAAA ATACCGGC CTTTAA GCCGGTAC TTTTCATTTCGAAAA TERM 242 185981 - 185962 - R 100 -10 -6.09888 | opp_overlap 185961 185962, overlap 185942 TTTTAACAAAAAAAA TACCGGCC TTTA AGCCGGTA CTTTTCATTTCGAAA TERM 243 185962 - 185981 + r 75 -9.3 -3.32354 | opp_overlap 185962 185942, overlap 185961 TTTTAACAAAAAAAA TACCGGC CTTTAA GCCGGTA CTTTTCATTTCGAAA Ctha_0157 186214 - 186008 - | zinc finger CDGSH-type domain protein TERM 244 186750 - 186775 + G 70 -5.3 -4.39571 | gap 1, overlap 186747 CCCTTACAAAAGGCG CGTCGG-TGCTG ATT CCGCAGCCGTCG TTTTCACTTTATGAA Ctha_0158 186419 - 187516 + | histidinol-phosphate aminotransferase TERM 245 187759 - 187741 - g 83 -10.2 -3.76232 | CCCGCAAATAGACAA GGTGGCGC TGG GCGCAACC GAAACAGTCGATTGG Ctha_0159 187532 - 188071 + | tRNA/rRNA methyltransferase (SpoU) TERM 246 188123 - 188077 - T 100 -9.5 -5.50499 | opp_overlap 188079 CGACATCTAAAAAAA GCCGGACAAAATGACCGTTCC TTGTG AGAACAGTGATTCAATCCGGC TGCAATTTGTTTTCA TERM 247 188167 - 188147 - T 72 -5.4 -4.65895 | opp_overlap 188147 188149, overlap 188149 GTTTTCAGTCAAAAA GAGCTTTC GCAAA GAAAGCGC TTTGTTTACCAGTTT Ctha_0160 188751 - 188173 - | Rubrerythrin Ctha_0161 190329 - 188830 - | Glutamate synthase (NADPH) TERM 248 189184 - 189204 + g 72 -3.2 -4.9725 | gap 1, opp_overlap 189184 189186 GCCACCGGTAAGAAT CAGG-GCCG TGTC CGCCACCTG TTTTTCTCTAAAAAT TERM 249 190390 - 190401 + r 76 -3 -5.4505 | opp_overlap 190390 190385 190391 AACCTCAATATAAAA CTTT GCAA AAAG TTTTTTCTTGCACAA TERM 250 190597 - 190574 - R 100 -12.5 -5.7827 | opp_overlap 190578 AATATAAATAAAAAA GGCAGCCTT GTTGCG AAGGCTGCC TTCACCGCCAAAATA Ctha_0162 191478 - 190630 - | CoB--CoM heterodisulfide reductase TERM 251 190723 - 190749 + g 83 -4.5 -5.31275 | opp_overlap 190723, overlap 190715 190733 CAGCACCGGAATTGA GCCTTTGAT TCCTTGCTT ATCAAGGGC TTTTTTCTGGTAGCC Ctha_0163 192516 - 191497 - | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 252 191594 - 191607 + g 73 -2.3 -5.25656 | ACCATAAACGGAGGC GGCGG GGTT TTGCC TTTTTTCGTCATTTT TERM 253 192875 - 192890 + r 79 -4 -5.47821 | CGATGCGGTTACTTA GCTTTT TCCT GAAAGC TTTTTTTGCATCACT Ctha_0164 193621 - 192872 - | succinate dehydrogenase and fumarate reductase iron-sulfur protein TERM 254 193294 - 193343 + g 76 -2.1 -5.41143 | gap 1, opp_overlap 193299, overlap 193296 GCTGCATATCAACAA TCAAATCACGG-AGAGCCGGTAAA TTA TTAATCGGCTCAACCGTGATGACA TTTTTTTCAACGCTG TERM 255 193338 - 193299 - G 76 -8.6 -4.10407 | gap 1, opp_overlap 193296 193294 ATATCAACAATCAAA TCACGG-AGAGCCGGTAAA TTA TTAATCGGCTCAACCGTGA TGACATTTTTTTCAA TERM 256 193469 - 193481 + g 74 -3.3 -4.97158 | opp_overlap 193469 CGAGCTGAACGAAAG CCTTG GCT CCAGG TTTTGTTTAATGTAA Ctha_0165 195378 - 193678 - | succinate dehydrogenase or fumarate reductase, flavoprotein subunit Ctha_0166 195956 - 195510 - | putative signal-transduction protein with CBS domains TERM 257 196391 - 196407 + H 82 -8.1 -4.35524 | CATCATCCTGAACTT GCTATTT CAA AAATAGC TTTTCGGTTTGCGCA Ctha_0167 196592 - 197023 + | hypothetical protein TERM 258 197142 - 197126 - T 82 -9.5 -4.19258 | AGAGCTCAGGCAAAA CGACTTT GGC AAAGTCG CTAAAATTCGTTGAC Ctha_0168 198012 - 197143 - | hypothetical protein TERM 259 197316 - 197282 - G 81 -8.4 -4.52857 | opp_overlap 197282 197281 197279 ACGCCTGAGAGAAAA GCCATCGCGTCTGGCG ATG CGCCCGAACCGATCGC ATATATTTTTGACGG Ctha_0169 198524 - 198024 - | helix-hairpin-helix motif TERM 260 198397 - 198413 + g 88 -7.9 -5.00616 | overlap 198399 AAAAGTTCTGCACGA CTCAGCG ATG CGCTGTG TTTTTTCAAGAGCAA TERM 261 198399 - 198411 + g 79 -9.1 -4.13561 | overlap 198397 AAGTTCTGCACGACT CAGCG ATG CGCTG TGTTTTTTCAAGAGC TERM 262 198481 - 198445 - G 75 -3.1 -5.1861 | gap 1, overlap 198452 198456 CCCATCATCAAAAAA CCCAAAAGAAAG-GAT ATGATG ATCACTTCCATTCGGG TCAGGCTGAGCTTGG TERM 263 198474 - 198456 - G 71 -3.8 -4.75954 | overlap 198452 198445 AAAACCCAAAAGAAA GGATATGA TGA TCACTTCC ATTCGGGTCAGGCTG TERM 264 198838 - 198824 - R 70 -5 -4.55118 | opp_overlap 198824 CAATTTGAGACAAAA TCATCA AAA TGACGA TTCGATAAAACCATG Ctha_0170 199998 - 198913 - | 3-dehydroquinate synthase Ctha_0171 200573 - 200010 - | Shikimate kinase TERM 265 200707 - 200696 - H 75 -2.2 -5.40072 | CCTGCCTGAAAAAAA CGCA TTCT TGCA ATGGCTTTTTATAGC TERM 266 200768 - 200778 + H 74 -5.4 -4.82901 | TGGGACAAGTTTTTC CCTT GGC AAGG TTTTTCTAACGCAAA Ctha_0172 200804 - 201196 + | OsmC family protein TERM 267 201228 - 201255 + F 100 -7.1 -5.72207 | opp_overlap 201228 TGAGCAGCGAAAAGA GGCGATTTTCA TGATTT TGAGAATTGCC TTTTTTTCATTTCGC TERM 268 201411 - 201385 - f 72 -2.3 -5.28778 | overlap 201387 ACCACCGATAAAAAA TTGGCCATTCA CAGAT TGAATAACCGA TAGGAGATAGGAAGT TERM 269 201501 - 201489 - g 72 -4.7 -4.59376 | opp_overlap 201489 201490, overlap 201490 ATCACGAAAGTAAAA GGGCG TGG CGCCT TTAGAAAACGAATTA TERM 270 203649 - 203635 - g 81 -8.6 -4.41348 | opp_overlap 203644 TTGCCGCCAAAGAAA TTGTGC TGA GCACAA TGGGCGTGCTGTTTC Ctha_0173 201435 - 203930 + | ferrous iron transport protein B TERM 271 203997 - 203971 - T 75 -4.4 -5.1166 | gap 1, opp_overlap 203971 GATTAAAATGAAAAA GCGGC-GGTTC AAAATA GAACTTGCCGC TTTTTTCATTCACAA TERM 272 203971 - 203997 + T 88 -6.6 -5.26875 | gap 1, opp_overlap 203971 GATTAAAATGAAAAA GCGGC-GGTTC AAAATA GAACTTGCCGC TTTTTTCATTCACAA Ctha_0174 206011 - 204068 - | deoxyxylulose-5-phosphate synthase TERM 273 204707 - 204667 - G 72 -3 -5.05505 | ACGACAAATCAAAAA CGCCGTGATGTGTGGGGC CGTCT GCACCAACCAGCCCAGCG CGATCGATGGCAAAA TERM 274 206319 - 206350 + r 100 -17.5 -4.87318 | opp_overlap 206326, overlap 206326 AGGAGATTTTTTTGA TGAAAAAGGGCGC GCGGTG GCGCCCTTTTTCA TTTTTGGATTTTACA TERM 275 206326 - 206343 + r 100 -9.8 -5.18355 | opp_overlap 206326, overlap 206319 TTTTTTGATGAAAAA GGGCGC GCGGTG GCGCCC TTTTTCATTTTTGGA TERM 276 206343 - 206326 - R 91 -9.8 -4.72272 | opp_overlap 206319 206326 TTTTTTGATGAAAAA GGGCGC GCGGTG GCGCCC TTTTTCATTTTTGGA Ctha_0175 207497 - 206361 - | sodium ion-translocating decarboxylase, beta subunit TERM 277 206859 - 206873 + g 74 -3.6 -5.00616 | CAGGCCGATGATCGG GAAAAG CAC TTTTTC TTTTTTCGACACCGA TERM 278 207061 - 207041 - G 79 -3.1 -5.33405 | overlap 207042 GCGACGAAAGAAAAA TCGCCGTTG GGC CATCAGCGC CACCGATAATACCAA TERM 279 207214 - 207199 - G 72 -4.7 -4.58663 | ATGAGTGTGGAAAAA TCGGT CATAGC ACCGA TTCCCAGAAAGATCA Ctha_0176 207923 - 207507 - | biotin/lipoyl attachment domain-containing protein Ctha_0177 208300 - 207929 - | hypothetical protein Ctha_0178 209844 - 208303 - | carboxyl transferase TERM 280 209276 - 209297 + g 77 -7.3 -4.37886 | opp_overlap 209287 TTGGCAACTTTCGGA CCGGTTACA AACA TGTAGCTGG TTTTATCAGCCATCA TERM 281 209524 - 209536 + g 70 -4.9 -4.431 | overlap 209508 CATGGCTTGATCCAT GATTT TGC AAATC TTTTGTGCGTAAGTC TERM 282 210148 - 210162 + G 88 -3.5 -5.65513 | TTCGTCAAAAAAACA TGTGC CGAAA GCGCA TTTTTTTAGTTAATC TERM 283 210380 - 210360 - g 73 -4 -4.91109 | opp_overlap 210379 GTTTTAGTAGAAAAA GAAGTGCT TCGTG AGCAATTC AAATGCGATTTGGCT TERM 284 210557 - 210534 - g 95 -3.2 -5.81412 | gap 1, overlap 210536 GTGATTCAAAAAAAA GGCTTT-TACG AGG CGTATAAAGGC GATCTATACTTGCAA Ctha_0179 210147 - 210896 + | hypothetical protein Ctha_0180 210966 - 212519 + | RNA polymerase, sigma 54 subunit, RpoN Ctha_0181 212559 - 213086 + | 20S proteasome A and B subunits Ctha_0182 213225 - 214730 + | heat shock protein HslVU, ATPase subunit HslU TERM 285 214984 - 214995 + G 78 -5.8 -4.79949 | TGATGCAACTCGTAT TCGG CAAC CCGA TTGTTTTTTTCGGGC TERM 286 215056 - 215090 + G 80 -5.6 -5.01811 | opp_overlap 215060, overlap 215033 215032 215059 215060 GCGTGAGTGCGGCCA TCAACCGTTTGTCGCT TGC GGCGGCAACCGGCTTA TTTTTCCTTTACTCC TERM 287 215059 - 215087 + G 80 -7.3 -4.58698 | opp_overlap 215060, overlap 215033 215032 215056 215060 TGAGTGCGGCCATCA ACCGTTTGTCGCT TGC GGCGGCAACCGGC TTATTTTTCCTTTAC TERM 288 215060 - 215086 + G 77 -10.8 -3.33592 | opp_overlap 215060, overlap 215033 215032 215059 215056 GAGTGCGGCCATCAA CCGTTTGTCGCT TGC GGCGGCAACCGG CTTATTTTTCCTTTA Ctha_0183 214818 - 215531 + | protein of unknown function UPF0005 TERM 289 215576 - 215558 - f 83 -7.4 -4.91511 | opp_overlap 215558 AGTTTAGCAGAAAAA GCGGCA TATTCAG TGCCGC TTTTTTATTTTATTT TERM 290 215558 - 215576 + F 100 -8.1 -5.95449 | opp_overlap 215558 AGTTTAGCAGAAAAA GCGGCAT ATTCA GTGCCGC TTTTTTATTTTATTT Ctha_0184 215670 - 216071 + | ACT domain-containing protein-like protein Ctha_0185 216114 - 216530 + | thioesterase superfamily protein Ctha_0186 216539 - 216985 + | 3-dehydroquinate dehydratase, type II TERM 291 217042 - 217020 - T 89 -10.6 -4.45117 | opp_overlap 217019 217016 TAGAGTTTAAACAAA GAGGAGCTGT AAA AAAGCTCCTC ATAGTTGTGATGATA TERM 292 217507 - 217531 + T 75 -9.5 -3.32963 | opp_overlap 217507 AGAGCCTTCATTATA GCATTTTTTTT ACA AAAAAAGATGC TTCTGCACTAAAAAT Ctha_0187 218178 - 217615 - | protein of unknown function DUF179 Ctha_0188 219833 - 218601 - | nuclease SbcCD, D subunit TERM 293 218876 - 218886 + g 89 -5.4 -5.76949 | overlap 218873 TAACTCGCACAATTG CATC TGC GATG TTTTTTTTGGCGATC TERM 294 219896 - 219868 - R 78 -11 -2.82516 | CGCTTGACGAGCACA GCCTCGCCAC CGAATTAAC GCGGCGAGGC AATCTATTCGTGAGA Ctha_0189 221366 - 219918 - | hypothetical protein TERM 295 221499 - 221517 + r 77 -6.8 -4.56597 | TTCAAAGCTAATTAC TTTTGTCG AAT CGATAAAA TTTTTCGCAAAGAAA TERM 296 221699 - 221720 + r 71 -8.1 -3.53811 | gap 1 CAGGGCGATCTCGCT TCAGGCAAAG AGG CTTTGCC-GA TTTCAAAACGGTCGC Ctha_0190 223281 - 221737 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 297 221919 - 221909 - G 70 -2.4 -4.98531 | GTTGGAAATGAAAAA TCGC ACG GCGT GAAAACAACGGATTG TERM 298 223550 - 223518 - R 100 -14.4 -6.11243 | opp_overlap 223515 223514 223523 ATTTAATAAAAAAAA GCGAAGGAAAATTT TTATC AAATCTTCCTTCGC TGAATGTTTATAAAA Ctha_0191 225740 - 223593 - | alpha-glucan phosphorylase TERM 299 224465 - 224488 + g 76 -7.4 -4.34402 | opp_overlap 224457 224465 AAAATGACCAAAACG CTTCGGTGCG ATCG CGCATCCAAG TTTTGGTGTGCACGC Ctha_0192 225975 - 226841 + | metallophosphoesterase TERM 300 226886 - 226896 + G 86 -2.6 -5.72053 | GATTCAAGCCAAGCC TATT CTT AATA TTTTTTGTTTGATTG TERM 301 226972 - 226954 - g 72 -8.8 -3.61536 | overlap 226941 AAGCCAACGCCCAAA GCACCGCT GGC AGCAGCGC AAGCGAAGAACCGCG TERM 302 227006 - 227016 + G 71 -6.8 -4.07568 | CTTATTCAATATGCC CACC GCA GGTG TTTTGCAGCGAGGCG TERM 303 227508 - 227494 - g 80 -5.6 -4.9645 | ATGACAACAACAAAA CAGCGC TTG GCGATG GACGTGGCTACCTCG Ctha_0193 226869 - 227657 + | hypothetical protein TERM 304 227681 - 227708 + F 90 -11.3 -4.62622 | opp_overlap 227681 CTTCCTTTGGCAATA TTGGGGGCAAG CAACCT CTCGCCCCCAA TTTATTTATCCTTCC TERM 305 227708 - 227681 - f 95 -13.5 -3.01712 | opp_overlap 227681 CTTCCTTTGGCAATA TTGGGGGCAAG CAACCT CTCGCCCCCAA TTTATTTATCCTTCC TERM 306 228026 - 228008 - g 72 -8.8 -3.48395 | overlap 228011 ATGTGGCGGAGAGAA CATGTCGC TTA GCGACCTG CTCCAATACCTATTC Ctha_0194 227871 - 228116 + | hypothetical protein Ctha_0195 229053 - 228130 - | metalloenzyme domain protein TERM 307 228250 - 228287 + g 79 -10.7 -3.65046 | opp_overlap 228248, overlap 228251 AGGATTTAAAGTATG TCGATCGTGGGAATTAT CCTC AAAATTCCCATGATCGC TTGTTAAGATAAACA TERM 308 228251 - 228286 + g 84 -14.2 -2.78813 | opp_overlap 228248, overlap 228250 GGATTTAAAGTATGT CGATCGTGGGAATTAT CCTC AAAATTCCCATGATCG CTTGTTAAGATAAAC TERM 309 228942 - 228974 + g 79 -12.7 -2.79183 | opp_overlap 228943, overlap 228950 CATCTTCAAGAAAAA AGCCCAGACCCAGAG CGT CTCTGAGTTTGGGCA TATCGTAAAGATGAA TERM 310 228973 - 228943 - G 100 -16.2 -5.45652 | opp_overlap 228942 228950 ATCTTCAAGAAAAAA GCCCAGACCCAGAG CGT CTCTGAGTTTGGGC ATATCGTAAAGATGA Ctha_0196 230334 - 229081 - | diaminopimelate decarboxylase TERM 311 229887 - 229906 + g 72 -2.9 -5.08088 | gap 1, overlap 229890 GATTGACACGAATGC CAA-CTGG AGCCA CCAGATTG TTTTTCTTGGCAATT TERM 312 230506 - 230488 - R 100 -11.7 -5.9218 | GATAGAATAAAAAAA GGCAGCC TTTTT GGCTGCC TTCAAAACATAAATC TERM 313 230545 - 230557 + r 72 -9.1 -3.27475 | overlap 230543 GAAACCGGCTTATTC CGCTG GAG CAGCG TCTTCTGATGAAGCA Ctha_0197 231174 - 230539 - | hypothetical protein Ctha_0198 232641 - 231322 - | chlorophyllide reductase subunit Y TERM 314 232029 - 232002 - G 76 -4.9 -4.75776 | overlap 232003 232004 AAGGCAAGGTAAAAA CCGCTTCAACA CCGAGT TGCTGAAGCAA TGCCCCGATTGCCAT Ctha_0199 233344 - 232691 - | Sporulation domain protein TERM 315 232925 - 232912 - G 72 -8.1 -3.66646 | AAGACCCGACCGAAA TGGCG TAAC CGCCA TCGGATAGATTCATT TERM 316 233145 - 233158 + g 76 -4.5 -5.08601 | gap 1 TCCTCGACTGCTTGA GCC-GC TTC GCTGGC TTTTTCTTCAACTGG Ctha_0200 234198 - 233341 - | hypothetical protein TERM 317 233373 - 233398 + g 76 -4.7 -4.84761 | opp_overlap 233380, overlap 233358 233395 CCTTTGCCTTCACCG GATGAAAGCGA TGGT TCACTATCATC TTTTTGTAAAGGTGT Ctha_0201 236045 - 234516 - | amino acid carrier protein Ctha_0202 236474 - 237262 + | Tetratricopeptide TPR_2 repeat protein TERM 318 237273 - 237289 + F 82 -5.1 -5.36441 | overlap 237271 TGTGATCAAAATCCG CAAAGCT TTT AGCGTTG TTTTTTCTATCCGAC TERM 319 237780 - 237767 - g 88 -8.1 -4.73682 | TTTCAGAATATAAAA CAGCG CTTG CGCTG GATTCAACCTTACAC Ctha_0203 237364 - 237948 + | Tetratricopeptide TPR_2 repeat protein Ctha_0204 238037 - 239359 + | nucleotide sugar dehydrogenase TERM 320 239387 - 239430 + F 91 -11.3 -4.82901 | gap 2 ACTTTCTACTGTTTT TTTCATGCTGCTG-C-TTGGC TCAA GCAAACGGCAGCAGCATGAAA TTTTTCTGGCAAAAA TERM 321 240137 - 240127 - g 80 -5.4 -5.00616 | TGGTGCTGGAAAAAA TTCC GAT GGAA CTCTCCCAAAAAGTG Ctha_0205 239529 - 240371 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase Ctha_0206 241008 - 240382 - | NADP oxidoreductase coenzyme F420-dependent TERM 322 241493 - 241505 + G 72 -6.3 -4.25873 | overlap 241494 CCGGAAATATTTGGA TCATC AAC GATGA TGTTTTTTATCCGGG TERM 323 241494 - 241507 + G 81 -5.3 -5.24129 | overlap 241493 CGGAAATATTTGGAT CATCA ACGA TGATG TTTTTTATCCGGGAA TERM 324 241799 - 241786 - g 83 -9.5 -4.04474 | ACAGCGGCAGATAAA GCGCG CAAT CGCGC TGTCACCATTGTGGG TERM 325 242444 - 242430 - g 72 -2.8 -5.00388 | TAAAGGAAAAACAAA GTTTTC TTG GACAAC CAATGCCAAGCTAAA TERM 326 242823 - 242833 + G 73 -2.4 -5.24129 | opp_overlap 242804, overlap 242804 GCTCGAGAACGTCTC GCCC AAA GGGG TTTTTTCTCAAAAGC TERM 327 243046 - 243057 + G 78 -5.8 -4.78237 | ATTGTGTCGTATATG CTCG CCAA CGAG TTTTATTGTAAAATG Ctha_0207 241345 - 243453 + | OmpA/MotB domain protein Ctha_0208 243677 - 244534 + | CDP-diacylglycerol/serine O-phosphatidyltransferase Ctha_0209 244641 - 244892 + | phosphoribosylformylglycinamidine synthase, purS TERM 328 245586 - 245547 - g 87 -7.1 -5.26875 | TTGTCAATGAAAAAA GAAACGTGCTCGGCATG ATGCCG CACCCCGAACGCGCTTC GGATGCGATGCTGGG Ctha_0210 244955 - 245662 + | phosphoribosylformylglycinamidine synthase I TERM 329 245836 - 245809 - f 79 -7.6 -4.33653 | opp_overlap 245809, overlap 245804 CACTTAAAAATGAAA GGTGCTACGCGA AACT TCGCGCTTCACC TTTGTTCAAACATGA Ctha_0211 245875 - 246765 + | hypothetical protein TERM 330 247907 - 247921 + G 79 -7.8 -4.4017 | overlap 247893 247892 247892 CCGGCAGAGCATTCA GCCGAG TTT TTCGGC TTTTATGACGGTTCG TERM 331 248043 - 248057 + G 73 -7.8 -4.15106 | TCCTTTTCTTCACCG TCGGCC TTT GGCTGA TTTTAAAAGTTCGTA Ctha_0212 246803 - 248083 + | major facilitator superfamily MFS_1 TERM 332 248782 - 248769 - g 73 -2.3 -5.16237 | overlap 248777 AACTTCACCAAAAAA TCGGG AAAG CTCGA CTTAGGACGCGAAGG TERM 333 249614 - 249624 + G 90 -6.8 -5.31275 | overlap 249610 GAGCAATTCGCTGCT CGAG GCA CTCG TTTTTTCTCATCGCG Ctha_0213 248454 - 250046 + | L-aspartate oxidase TERM 334 250090 - 250107 + T 100 -11.3 -5.4505 | opp_overlap 250090 GAATGAAATAAAAAA GCCAGCT AAAA AGCTGGC TTTTTTGTTGAGCAA TERM 335 250107 - 250090 - T 100 -11.3 -5.72053 | opp_overlap 250090 GAATGAAATAAAAAA GCCAGCT AAAA AGCTGGC TTTTTTGTTGAGCAA Ctha_0214 251978 - 250134 - | GTP-binding protein TypA Ctha_0215 253603 - 252158 - | surface antigen, putative Ctha_0216 253788 - 254249 + | hypothetical protein TERM 336 254300 - 254326 + F 100 -13.8 -4.62783 | opp_overlap 254294 254289 254300, overlap 254302 AAAAGCTAACAGCAA TGGCGCAGCTTT TTC AAGGCTGCGCTA TTTTTGCGATGCATC TERM 337 254326 - 254300 - f 77 -9.4 -3.41203 | opp_overlap 254300 254302, overlap 254294 254289 AAAAGCTAACAGCAA TGGCGCAGCTTT TTC AAGGCTGCGCTA TTTTTGCGATGCATC TERM 338 254302 - 254324 + F 100 -14.2 -3.92746 | opp_overlap 254300 254294 254289, overlap 254300 AAGCTAACAGCAATG GCGCAGCTTT TTC AAGGCTGCGC TATTTTTGCGATGCA TERM 339 254423 - 254413 - f 72 -5.4 -4.59109 | TACATTTTTGAAAAA CATC ACC GATG AGGAGTTATGAAACG TERM 340 255867 - 255881 + G 72 -2.8 -4.93365 | overlap 255868 GAGTTGATGTCAGTG GGATTG GTG CAATCA TTTTTAATTGTGGGA Ctha_0217 254574 - 256145 + | protein of unknown function DUF92 transmembrane TERM 341 256225 - 256205 - T 93 -4.7 -5.72622 | overlap 256198 256223 CCGACAAAGAAAAAA CGTTTTTCC AAA AGAAAATCG CCACAGCCGGGCAGC TERM 342 256262 - 256223 - T 85 -7.1 -5.07652 | gap 1, overlap 256205 256225 TTTTCCAAAAGAAAA TCGCCACAGCCGGGCAGC GCAAT GCTGCCTGGC-GCAACAA TCAAGCGTTGCCTAA Ctha_0218 257483 - 256284 - | 2-hydroxyglutarate dehydrogenase TERM 343 256610 - 256600 - G 73 -4.6 -4.73388 | overlap 256604 AAGCCCGAGTAAAAA GCCA TCT CGGC TAAATCCGAAAAGTT TERM 344 256783 - 256773 - G 71 -6.8 -4.08692 | opp_overlap 256777, overlap 256776 TAAGTTTTGGCAAAA CAGC TTG GCTG GCTCGGCCAATTTGA TERM 345 256777 - 256793 + g 72 -8.7 -3.66803 | opp_overlap 256773 256776 TTTTGGCAAAACAGC TTGGCTG GCT CGGCCAA TTTGAAATATTCGCC TERM 346 256984 - 257002 + g 70 -2.3 -5.00884 | overlap 256986 GCGTTCAAAACAACT TGGCCGC CCCGC GCTGCTA TTTTTTCCACGAGCT TERM 347 257262 - 257251 - G 73 -4.4 -4.82901 | opp_overlap 257251 TCCGCCTTACAAAAA GCTT CCAG AAGC ATTTTGCCTTTGCGG TERM 348 257505 - 257532 + r 83 -11.5 -3.20382 | opp_overlap 257505 CCTCGATATAAAAAA GGCATCTTTTT CTGTAA AAAAAGATGCC TTAATCAATATGAAA TERM 349 257532 - 257505 - R 100 -12.2 -5.36441 | opp_overlap 257505 CCTCGATATAAAAAA GGCATCTTTTTC TGTA AAAAAAGATGCC TTAATCAATATGAAA Ctha_0219 258818 - 257556 - | 8-amino-7-oxononanoate synthase Ctha_0220 259080 - 260099 + | NAD-dependent epimerase/dehydratase TERM 350 260190 - 260172 - T 100 -11.7 -5.72622 | opp_overlap 260172 CTGAGAAATAAAAAA GCCTCGC GCAAA GCGAGGC TTTTGAGTTTATGTA TERM 351 260172 - 260190 + T 100 -11.7 -4.41177 | opp_overlap 260172 CTGAGAAATAAAAAA GCCTCGC GCAAA GCGAGGC TTTTGAGTTTATGTA Ctha_0221 261803 - 260223 - | D-3-phosphoglycerate dehydrogenase Ctha_0222 262244 - 261927 - | hypothetical protein TERM 352 262368 - 262383 + H 77 -6.8 -4.63863 | TTTTGCCTATCTTCA GCCTGT TTCA ACGGGC TTCTTTTTATCTTGC TERM 353 263750 - 263764 + G 71 -7.2 -4.04206 | opp_overlap 263721, overlap 263721 CAAAACCGCTGTTTC CAATTG GGT CAATTG TTTCTGTGCCGCTGA TERM 354 264252 - 264235 - g 76 -4.1 -5.0133 | gap 1, overlap 264222 264236 264237 264240 GATTTGCTTAAAAAA GC-CAACG AAA CGCTGAGC CAAAGTCTCGGAAAA Ctha_0223 262432 - 264687 + | protein serine/threonine phosphatase Ctha_0224 264817 - 265179 + | anti-sigma-factor antagonist Ctha_0225 265216 - 265659 + | putative anti-sigma regulatory factor, serine/threonine protein kinase TERM 355 266834 - 266852 + G 81 -3.8 -5.43866 | TACTACGATGTGTTT GAAGTAGA CGA TCGGCTTC TTTTTTTGGCCATTG Ctha_0226 265727 - 267436 + | protein serine/threonine phosphatase TERM 356 267712 - 267699 - g 78 -6.7 -4.60041 | ATTTATGTGGAAAAA GGCAA AGTG TTGCC AAATGCGGATTATAG Ctha_0227 267591 - 268034 + | Proto-chlorophyllide reductase 57 kD subunit TERM 357 268045 - 268023 - T 84 -7.6 -4.78764 | opp_overlap 268023 GAAATCTATGAAAAA GCCGCGAAGT AAA ACCCAGCGGC TTTTTTTGTTCCCCC TERM 358 268023 - 268045 + T 88 -3.2 -5.7946 | opp_overlap 268023 GAAATCTATGAAAAA GCCGCGAAGT AAA ACCCAGCGGC TTTTTTTGTTCCCCC Ctha_0228 268273 - 268061 - | FeS assembly protein IscX TERM 359 268542 - 268558 + H 75 -9.5 -3.27476 | CATTTTCTTACCATC TGCGTTT TCT AAACGCA TTAATGCTTGAACAT TERM 360 268640 - 268652 + H 72 -7.7 -3.75581 | opp_overlap 268638, overlap 268638 TTGCCTTACAAACCG GGGAA TCT TTCCC TATTATTTTCTGAAA TERM 361 270448 - 270437 - g 70 -2.2 -5.04222 | overlap 270439 GAAGGAAATCAAAAA CTCC GCGA AGAG CTTCGCGCGCATGTG Ctha_0229 268688 - 270667 + | acetate/CoA ligase TERM 362 270705 - 270728 + F 100 -13.1 -5.80951 | opp_overlap 270705 ATAGTTTTTCCAAAA GGCGCGCCG ACTCAA CGGTGCGCC TTTTTTATTTTCAAT TERM 363 270728 - 270705 - f 86 -10.9 -4.08394 | opp_overlap 270705 ATAGTTTTTCCAAAA GGCGCGCCG ACTCAA CGGTGCGCC TTTTTTATTTTCAAT TERM 364 271464 - 271489 + G 74 -3.9 -5.00616 | overlap 271466 271467 CGTTTATGCCGCCGA TGCCGATGCCG ATGG CGACATCGATA TTTTTTCGGCAGCGA TERM 365 273596 - 273611 + G 76 -4.8 -4.89393 | TTGAAGGAAAGAGCT TAAACA GCGG TGTTTA TTTTTATCAAATTTC Ctha_0230 270886 - 273672 + | Fibronectin type III domain protein TERM 366 273700 - 273726 + T 87 -12.4 -3.08603 | opp_overlap 273705, overlap 273705 ATTTCCATCACAAAG AAAAAGGGGCTT TCA AAGCCCCTTTTC ATTTTCAGCATATTT TERM 367 273721 - 273705 - T 100 -12.3 -5.40464 | opp_overlap 273700 273705 CATCACAAAGAAAAA GGGGCTT TCA AAGCCCC TTTTCATTTTCAGCA TERM 368 273705 - 273721 + T 100 -12.3 -4.67038 | opp_overlap 273705, overlap 273700 CATCACAAAGAAAAA GGGGCTT TCA AAGCCCC TTTTCATTTTCAGCA Ctha_0231 275873 - 273816 - | GLUG domain protein TERM 369 276354 - 276375 + r 81 -10.3 -3.5594 | opp_overlap 276346 GCGATAATTCCAATC GTTACTGTT AGGA AACAGTAAC TTTGAAAAATCAATT TERM 370 276556 - 276577 + r 100 -10.2 -5.47914 | opp_overlap 276553 276556 276558 GCCACTCGAAAAGTA GAGCCAAG CATAAA CTTGGCTC TTTTTTATGATTTTT TERM 371 276577 - 276556 - R 80 -10.9 -3.09831 | opp_overlap 276556, overlap 276553 276558 GCCACTCGAAAAGTA GAGCCAAGC ATAA ACTTGGCTC TTTTTTATGATTTTT Ctha_0232 277934 - 276633 - | Histidinol dehydrogenase TERM 372 277548 - 277568 + g 72 -5.3 -4.56775 | ATAGGCCGCTTGTCC GCCCGGC ACATAAA GCAGGGC TTTTTCAACAGCGGT TERM 373 278102 - 278090 - H 76 -2.7 -5.45802 | CGCTTAAAACAAAAA TCAAC AAT GTTAA AAAGACCCTTCAAAA TERM 374 279136 - 279125 - g 74 -5.8 -4.67353 | opp_overlap 279125 279123 TCATCGATGGAAAAA TCGC ATAC GCGA TATTTGAGCTTCATT TERM 375 279950 - 279987 + G 70 -9.1 -3.35298 | overlap 279982 GTTGAAAAGGAGGTT TCGGCGGGAAAACCGGT GTTT ATCGATTTCACCGCCGA TTGGTGCTTTACTTG Ctha_0233 278096 - 280258 + | cytochrome c biogenesis protein transmembrane region TERM 376 280269 - 280320 + F 74 -6 -4.60255 | opp_overlap 280274, overlap 280271 AATAAATAAAAATCG TAACAGGTATTATTCTTAATCGTT ATAA ACCGAGAAAGAATAATACCTGAAA TTTTTAACGAGTTAT TERM 377 280315 - 280274 - f 70 -8.9 -3.18155 | opp_overlap 280271 280269 ATAAAAATCGTAACA GGTATTATTCTTAATCGTT ATAA ACCGAGAAAGAATAATACC TGAAATTTTTAACGA TERM 378 280571 - 280581 + G 74 -8.2 -3.98214 | opp_overlap 280570 TGGAATGGACAAATC CGGG ATG CCCG TTTGTCGTCGGTCAT Ctha_0234 280339 - 280995 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 379 281046 - 281068 + F 100 -8.4 -5.75342 | opp_overlap 281046 GATATAACCGAAAAA GCAGGCCGTT TTA AACAGTCTGC TTTTTTTTGGAAAAA TERM 380 281068 - 281046 - f 87 -8.4 -4.79756 | opp_overlap 281046 GATATAACCGAAAAA GCAGGCCGTT TTA AACAGTCTGC TTTTTTTTGGAAAAA TERM 381 281271 - 281254 - g 71 -7 -4.1299 | opp_overlap 281253, overlap 281251 TTGAAAAAAAATGAA GCGAAG GAAACA CTTCGC GTGTTGGTAAAATGC Ctha_0235 281161 - 281466 + | hypothetical protein TERM 382 281594 - 281582 - g 70 -4.9 -4.46233 | TCAACTTCAAATAAA TTTTC CGC GAAAA TTGGAGCGCCACTTC TERM 383 282056 - 282068 + G 71 -3.3 -4.84918 | opp_overlap 282051 GATTTTAACACGACT TCCGG CAG CCGAA TTTTGTATTTGTGGG Ctha_0236 281474 - 283759 + | peptidase S8 and S53 subtilisin kexin sedolisin Ctha_0237 283776 - 284114 + | export-related chaperone CsaA Ctha_0238 285360 - 284158 - | glycosyl transferase group 1 TERM 384 285145 - 285132 - G 72 -6.7 -4.25283 | opp_overlap 285132 ATGCTCCCAGTAAAA CGGTT TTTA AACCG TCAATTTCTTTTTCA Ctha_0239 286676 - 285378 - | GTP-binding proten HflX TERM 385 286611 - 286625 + g 74 -5.6 -4.57341 | TGGTGGGTGGCTGAT GCCGAT TAA AACGGC TTTTTCAGGGGAATT TERM 386 287666 - 287654 - g 71 -3.4 -4.77757 | overlap 287659 287661 CCCGAAAAATTAAAA CAAG GGACG CTTG ATGAAAACTTTATCA Ctha_0240 286919 - 287872 + | Squalene/phytoene synthase TERM 387 288359 - 288332 - g 93 -9.2 -4.788 | AAATCAACGGAAAAA TGCCCGACGA GCACACCT TCATCGGGCA AGCGCACGGCTCGAT Ctha_0241 287980 - 288615 + | hypothetical protein TERM 388 288663 - 288691 + F 88 -8.9 -4.7261 | AAATCGTCCCATTTA TGAGCGGATTTTT GGT AAATTTCCGCTCA TTTATTTTCATCAAT TERM 389 288960 - 288944 - g 73 -4.3 -4.81734 | AAAGACGACGAAAAA GCAGCGG TCG CCATTGC CGGCAGAATTATGTC TERM 390 289691 - 289680 - g 80 -7.2 -4.58685 | overlap 289682 AAATGCTTTCAAAAA CGGC GGAA GCCG TGAACGGCTCAACTG TERM 391 289936 - 289909 - g 70 -9.9 -3.02043 | opp_overlap 289909 AATTTTCGGCGAATA TGTCGAGCCGA AGCTCA TCGACCCGACA TTTATCATGGACTAT Ctha_0242 288734 - 290287 + | lysyl-tRNA synthetase TERM 392 290313 - 290336 + F 100 -9.6 -6.11229 | opp_overlap 290289 290288 290313 GCGCATCGCAATTAA CCGCTAAGAT TGAA AACTTAGCGG TTTTTTTATTTTCGT TERM 393 290336 - 290313 - f 75 -9.6 -3.35813 | opp_overlap 290313, overlap 290289 290288 GCGCATCGCAATTAA CCGCTAAGAT TGAA AACTTAGCGG TTTTTTTATTTTCGT TERM 394 290450 - 290461 + F 70 -3 -5.08824 | AAGGAAACATGTATT GATA TTTG TATC TTTTTTCAGTGCACA Ctha_0243 290611 - 291141 + | NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 TERM 395 291467 - 291447 - g 70 -4.7 -4.51378 | opp_overlap 291439, overlap 291433 ATCGATACGAGAAAA TCCCGATTT CGA AAACCTGGA CATCGACATTCTCAG Ctha_0244 291229 - 292050 + | UspA domain protein Ctha_0245 293209 - 292055 - | Beta-N-acetylhexosaminidase TERM 396 293188 - 293169 - G 78 -5.7 -4.83246 | gap 1, opp_overlap 293186 293186 293187 CTATAAACAAACAAA CGCG-GCT TTTTG AGCACGCG CTTAAAAGCGACTTT TERM 397 293186 - 293200 + g 73 -2.1 -5.1861 | gap 1, opp_overlap 293169 293197, overlap 293186 293187 293197 CGGCTTTTTGAGCAC G-CGCT TAAA AGCGAC TTTTTTCATCCTGAG Ctha_0246 293577 - 293308 - | hypothetical protein Ctha_0247 294101 - 294802 + | Inorganic diphosphatase TERM 398 294877 - 294848 - f 72 -7.2 -3.93742 | gap 1, opp_overlap 294848, overlap 294843 CGTATAGAAATAGAA CCGGCGGTTTCAT TTTAC ATGAAG-CGCCGG TTTTTTTGTATATTT TERM 399 294848 - 294877 + F 100 -9.4 -5.82281 | gap 1, opp_overlap 294848 294843 CGTATAGAAATAGAA CCGGCGGTTTCAT TTTAC ATGAAG-CGCCGG TTTTTTTGTATATTT TERM 400 295147 - 295129 - g 73 -7.4 -4.07687 | ATCTTTTCTTCAAAA GCGCGA TTCTTGT TCGCGC CAAAGGCCTCGACTC TERM 401 295258 - 295268 + G 91 -8.2 -5.00616 | overlap 295252 TTTCCTACATGGCTT GGCG AGC CGCC TTTTTTACAACCACC Ctha_0248 294951 - 295439 + | hypothetical protein Ctha_0249 295451 - 295954 + | L-asparaginase TERM 402 296054 - 296024 - T 77 -6.2 -4.74103 | overlap 296052 TGGGCAACCTAAAAA CGGCTGGTTATTTG TAC CAAATAAAAAACCG GCGAAATAGGGTTCG TERM 403 296073 - 296052 - T 100 -11.6 -5.68438 | overlap 296024 GTACCAAATAAAAAA CCGGCGAA ATAGGG TTCGCCGG TTAAAAGGAAGGAAG Ctha_0250 296454 - 296119 - | anti-sigma-factor antagonist Ctha_0251 297377 - 296454 - | protein-export membrane protein SecF TERM 404 296587 - 296575 - G 72 -4.8 -4.67641 | overlap 296584 ATGGCAAAAGCAAAA CTGC GAATA GCAG GGCCGGCCAAAATAA Ctha_0252 299357 - 297414 - | protein-export membrane protein SecD TERM 405 298800 - 298763 - G 71 -7 -4.07568 | gap 1, opp_overlap 298763 298767 CCGTTCCTTTCAAAA GCTTGCGGACACG-CTG CTTAT CAGACACGCCCGGAAGC TCCACAATAATGCGC TERM 406 299441 - 299465 + r 75 -4.3 -5.04249 | opp_overlap 299448, overlap 299443 299444 CTCTCGCTGCAATGT CAATTAAGGAG CAT CTCCTTAAGTA TTTATTTTTTCACAA TERM 407 299443 - 299463 + r 73 -6.9 -4.13692 | opp_overlap 299448, overlap 299441 299444 CTCGCTGCAATGTCA ATTAAGGAG CAT CTCCTTAAG TATTTATTTTTTCAC TERM 408 299444 - 299462 + r 78 -10.4 -3.06588 | opp_overlap 299448, overlap 299443 299441 TCGCTGCAATGTCAA TTAAGGAG CAT CTCCTTAA GTATTTATTTTTTCA Ctha_0253 300628 - 299750 - | inosine guanosine and xanthosine phosphorylase family Ctha_0254 301002 - 300637 - | holo-acyl-carrier-protein synthase Ctha_0255 301906 - 301019 - | nicotinate-nucleotide pyrophosphorylase TERM 409 301609 - 301585 - G 72 -5.8 -4.4595 | gap 1, opp_overlap 301607, overlap 301607 GCATAAAATTCAAAA CCGTTCGCTCA TACC TGAGC-AACAG CGACGTGCTCGCGGT Ctha_0256 302675 - 302004 - | peptidase S16 lon domain protein TERM 410 303136 - 303121 - g 77 -9 -3.84185 | opp_overlap 303120 303121 TGTACGGAAATATAA TCCACC TATT GGTGGA ATTTGCGATTATGCC Ctha_0257 302789 - 303199 + | dihydroneopterin aldolase Ctha_0258 303276 - 303833 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Ctha_0259 304243 - 303998 - | hypothetical protein Ctha_0260 306308 - 304245 - | GPW/gp25 family protein Ctha_0261 306877 - 306311 - | phage baseplate assembly protein V Ctha_0262 307833 - 306877 - | late control D family protein TERM 411 307029 - 307047 + g 70 -2.3 -5.03145 | opp_overlap 307029 307030 TGCCTGGCAACGAAA TCCGCCC AGAAA GCGTGGA TTTTTTCGCACCTTC Ctha_0263 307969 - 308406 + | hypothetical protein TERM 412 308449 - 308468 + T 73 -7.2 -4.18762 | CACGCGTGCAAATCG TTTATCGC CACG GCGGTAAA TTTTGAGTGACCGTT Ctha_0264 308701 - 308450 - | putative inner membrane protein Ctha_0265 309189 - 308698 - | hypothetical protein Ctha_0266 311187 - 309211 - | phage tail tape measure protein, TP901 family Ctha_0267 311744 - 311217 - | putative phage tail fiber protein Ctha_0268 312877 - 311741 - | Baseplate J family protein TERM 413 313562 - 313550 - R 73 -4.1 -5.02777 | ACACAGAAAAACAAA TGCCA GGG TGACA CAGAAAAACAAATGC TERM 414 313587 - 313575 - R 73 -4.1 -5.02777 | ACACAGAAAAACAAA TGCCA GAG TGACA GAGGAAGACAAATGC Ctha_0269 314046 - 313735 - | hypothetical protein TERM 415 313855 - 313841 - G 72 -2.8 -5.07107 | opp_overlap 313847, overlap 313842 GAAAGCTCGAAAAAA TCTTTC GTT GAAAGC CCTTTCAACTCTTCC TERM 416 313982 - 314026 + g 72 -2.8 -5.01042 | gap 1, opp_overlap 313974 313973, overlap 313988 ACCAAATCGCCGACC GTCG-GCTCCGCAAGCTCTAC GTTC GTAAAGCTTGCGGATTTCTTC TTTTTAATTTCAATT TERM 417 313988 - 314019 + g 100 -16 -4.78157 | opp_overlap 313973, overlap 313982 TCGCCGACCGTCGGC TCCGCAAGCTCTAC GTTC GTAAAGCTTGCGGA TTTCTTCTTTTTAAT TERM 418 314059 - 314078 + r 79 -8.6 -3.99957 | gap 1, opp_overlap 314058 CATAGTTAGATAGAC GTGA-CGGC AGT GCCGTTCAC TTTATAGATGTTTGA Ctha_0270 314549 - 314049 - | phage major tail tube protein Ctha_0271 315791 - 314553 - | tail sheath protein TERM 419 315774 - 315796 + g 76 -2 -5.33124 | opp_overlap 315761 315778, overlap 315761 315778 AATTTCCACTCCGTG TAAATATGCT GCT GGCATAGTTG TTTTGTTTTGTTGTT Ctha_0272 316519 - 315890 - | hypothetical protein Ctha_0273 317045 - 316527 - | hypothetical protein Ctha_0274 317443 - 317042 - | hypothetical protein Ctha_0275 317851 - 317456 - | L-alanyl-D-glutamate peptidase Ctha_0276 318278 - 318586 + | hypothetical protein Ctha_0277 319015 - 318755 - | hypothetical protein TERM 420 318948 - 318967 + g 71 -7.8 -3.92075 | AAGCTGAGATGATGA GCCGAAGC ATAA GCTTCCGC TTTATCAATCAGGGT TERM 421 319139 - 319122 - R 100 -8.4 -5.60993 | opp_overlap 319122 CCCCTGACAAAAAAA GCCTCC GTTTCA GGAGGC TTCTTTGGTTGCGTT TERM 422 319122 - 319139 + r 79 -8.4 -4.09923 | opp_overlap 319122 CCCCTGACAAAAAAA GCCTCC GTTTCA GGAGGC TTCTTTGGTTGCGTT Ctha_0278 319430 - 319131 - | hypothetical protein Ctha_0279 319786 - 319433 - | hypothetical protein TERM 423 319510 - 319493 - G 72 -4.7 -4.57073 | overlap 319494 319495 CACCTTGCCCAAAAA CGCCAAG ACCG CGCGGCG CCTGGCCTTTGTGAG Ctha_0280 320280 - 319783 - | hypothetical protein Ctha_0281 320498 - 320277 - | hypothetical protein Ctha_0282 320769 - 320488 - | hypothetical protein TERM 424 321066 - 321092 + r 71 -6.4 -4.07568 | overlap 321067 ATAATTCCTTTTTTG TCGGTCTCCGGC GGA GACGAAGACCGC TTTTCCAAAACACCA TERM 425 321067 - 321091 + r 75 -9.9 -3.04398 | overlap 321066 TAATTCCTTTTTTGT CGGTCTCCGGC GGA GACGAAGACCG CTTTTCCAAAACACC TERM 426 321131 - 321158 + r 83 -9.9 -3.91434 | gap 1 ACCACTTATTTGCGC CCGCCG-CGTTC GAGCA GAATGTCGGCGG TTTGTGCGATGATTT Ctha_0283 321996 - 321121 - | Uncharacterized ATPase putative transposase-like protein TERM 427 321843 - 321832 - G 74 -7.2 -4.19735 | opp_overlap 321831, overlap 321827 CTCCGTAAAAGCAAA CCGC GCTC GCGG CTCTTGGATAATTTC TERM 428 322436 - 322484 + r 75 -10.2 -3.03243 | opp_overlap 322436, overlap 322438 322440 322467 TCGTTCAGCATGACA CGCAGGTCAGCCCCTACGATTC CGGTT GTCTTGTAGGGGCGAACCTGTG TGTTCGCCCGTGCAT TERM 429 322438 - 322482 + r 74 -9.2 -3.07344 | opp_overlap 322436, overlap 322436 322440 322467 GTTCAGCATGACACG CAGGTCAGCCCCTACGATTC CGGTT GTCTTGTAGGGGCGAACCTG TGTGTTCGCCCGTGC TERM 430 322467 - 322498 + r 82 -10.9 -3.23692 | opp_overlap 322436, overlap 322440 322438 322436 CGATTCCGGTTGTCT TGTAGGGGCGAAC CTGTGT GTTCGCCCGTGCA TTAATCCTGCTGCTC Ctha_0284 324704 - 322512 - | hypothetical protein TERM 431 322839 - 322849 + g 79 -3.2 -5.40474 | opp_overlap 322803, overlap 322794 322845 322847 GCCGTCGCCCGCCAG CGTT TTG AGCG TTTTTTTGACGCGCT TERM 432 324310 - 324287 - G 72 -5.3 -4.56597 | opp_overlap 324276 324301 CCGTCGCCTGAAAAA GCAAGGC GTATTTGTCG GCCTTGC GGCGATTGTAATCGG TERM 433 324381 - 324404 + g 74 -5.8 -4.56775 | overlap 324382 GGCTTCGGCATCGTT AGGCGGCGTG TTCT CGCGCAGCCA TTTTTCCCGCGCGCT TERM 434 324382 - 324403 + g 70 -9.3 -3.33744 | overlap 324381 GCTTCGGCATCGTTA GGCGGCGTG TTCT CGCGCAGCC ATTTTTCCCGCGCGC Ctha_0285 324922 - 324707 - | hypothetical protein TERM 435 324802 - 324789 - G 75 -9.5 -3.53343 | opp_overlap 324781, overlap 324777 AATCGCGCCTGCAAA CGCGG GTTT CCGCG CCGGATGGACATTTT TERM 436 325295 - 325265 - g 100 -8.2 -5.40072 | GTTTCTGGAAAAAAA GCCCGAATCGGAAA ATA TTTCGGAGGCGGGC GACGAGCCGAGCGCG TERM 437 325360 - 325348 - g 78 -6.2 -4.62872 | overlap 325338 325350 AGCAAGCCGCAAAAA CGGC AGCAA GCCG CAGCGAAAGCGAGGC Ctha_0286 325041 - 325853 + | transcriptional regulator, XRE family TERM 438 325869 - 325879 + T 71 -6.8 -4.0896 | overlap 325859 GCCGTCGCCGGCACA TCGC GCC GCGA TTTTCCGCCACATTT TERM 439 326139 - 326102 - T 100 -10 -6.37666 | ACAAAAGAAAAAAAA GCGAAGCAAAAACCGC TTACAT GCAATTTTCACTTCGC TTCCTACTTTATGCA Ctha_0287 327322 - 326171 - | arsenite-activated ATPase ArsA Ctha_0288 328721 - 327366 - | hypothetical protein TERM 440 327430 - 327440 + g 82 -5.4 -5.15634 | CTTGAATCATCATCA GAAG CCT CTTC TTTTTTACTGGACTG TERM 441 328900 - 328863 - R 100 -13.7 -4.26871 | gap 1, opp_overlap 328870, overlap 328865 CAAGTGAGGAATAAA CATTATAGGCAGCAATGC CTT ACATCGCTGCCTATAA-G AAAAGCAAATTTACT TERM 442 328899 - 328865 - R 100 -17.4 -3.72775 | opp_overlap 328870, overlap 328863 AGTGAGGAATAAACA TTATAGGCAGCAATGC CTT ACATCGCTGCCTATAA GAAAAGCAAATTTAC Ctha_0289 329156 - 328911 - | bacteriochlorophyll C binding protein Ctha_0290 329556 - 329344 - | hypothetical protein Ctha_0291 330012 - 329587 - | chlorosome envelope protein C TERM 443 330025 - 330046 + r 77 -6.7 -4.54026 | gap 1, opp_overlap 330039, overlap 330039 CATTTTTTCCTCCTT GCTGCATTAA AAA TTAA-GCAGC TTATTTTATTTAAAG TERM 444 330039 - 330049 + r 71 -4 -4.91429 | opp_overlap 330039, overlap 330025 TGCTGCATTAAAAAT TAAG CAG CTTA TTTTATTTAAAGTTT Ctha_0292 331383 - 330175 - | arsenite-activated ATPase ArsA TERM 445 330839 - 330828 - G 73 -4.4 -4.88407 | overlap 330821 CTACCGAATCAAAAA CTTC TTGA GAAG GAACATAATTTGATA TERM 446 331456 - 331446 - H 71 -3.2 -5.02323 | opp_overlap 331455, overlap 331455 CGATGAGAAACAAAA GCCT ATA AAGC CAGAATCTGACATTA TERM 447 332553 - 332580 + G 74 -5.6 -4.67048 | CGCTTTCACGATATT TTTCAGCGCTAT TTAA ATCGAGCTGAAA TTTATTTTCCCATGA TERM 448 332703 - 332693 - g 72 -8.2 -3.68619 | TCGAAGCCATGCAAA CGCC GTT GGCG CATGGCAGTTTATTA Ctha_0293 331890 - 333578 + | Lytic transglycosylase catalytic TERM 449 334777 - 334766 - g 71 -7.2 -4.18018 | GCCGCTTACCCAAAA GGCG ACAT CGCC AAAAAAGCGCAAGAG TERM 450 334959 - 334949 - g 72 -3.2 -5.00616 | CCTGCGCCCAAAAAA GAAG AAC CTCC CAGAAAACGCACCCG Ctha_0294 333680 - 335902 + | TPR repeat-containing protein Ctha_0295 335899 - 336717 + | oxidoreductase FAD/NAD(P)-binding domain protein Ctha_0296 337926 - 336778 - | glycosyl transferase group 1 Ctha_0297 338972 - 337923 - | glycosyl transferase family 9 TERM 451 338940 - 338924 - G 74 -3.6 -5.00616 | opp_overlap 338934 338936 GCCGCCCCCAAAAAA GACGCA TTAGC CGCGCC AAAAGCCGCCGTTTT Ctha_0298 339574 - 339107 - | hypothetical protein Ctha_0299 339704 - 341128 + | hypothetical protein TERM 452 342026 - 342013 - g 73 -2.4 -5.25803 | overlap 342020 AAGTCGTAGAAAAAA GAAC AATCCG GTTC TCATCGGCGAGCCTG TERM 453 342065 - 342054 - g 80 -7.2 -4.56597 | CTGGCGTGGGAAAAA CCGC CATT GCGG AAGGCCTTGCACTGA TERM 454 342493 - 342481 - g 72 -5.5 -4.49337 | overlap 342489 CAATATTAAGGAAAA GTACG AGA CGCAC CACAATGTGCGCTAC TERM 455 343532 - 343546 + G 72 -8.6 -3.76492 | opp_overlap 343534 TTCCTAAACCGAATC GACGAT GTC ATCGTC TTTCATCAGCTTGAG TERM 456 343826 - 343812 - g 72 -8.6 -3.82031 | opp_overlap 343811 TCAAGTATGATGAAA GCAATG ACG CATTGC AATTTGTAGATGCAG Ctha_0300 341351 - 343906 + | ATPase AAA-2 domain protein TERM 457 343935 - 343955 + F 100 -14.1 -5.75945 | opp_overlap 343926 343935 ACATAACATTTAGAA GACCTGCTA AAT TAGCAGGTC TTTTTTTTACCCAAT TERM 458 343955 - 343935 - f 100 -14.1 -3.44362 | opp_overlap 343935, overlap 343926 ACATAACATTTAGAA GACCTGCTA AAT TAGCAGGTC TTTTTTTTACCCAAT TERM 459 344069 - 344040 - f 100 -10.1 -5.95539 | GCGGAAATAAAAAAA GCAGTTAGACTCC GTAA AAAGCCTAACTGC CTTAAACCACAAGCG Ctha_0301 344268 - 345227 + | PSP1 domain protein TERM 460 345587 - 345605 + G 73 -2.3 -5.10461 | overlap 345582 TGTTTATGAGTTGCC GTTGCAG TTTTT CAGCGAC TTTTTCTTCGGTGCG Ctha_0302 345243 - 345704 + | cyclase/dehydrase TERM 461 345719 - 345709 - T 71 -3.2 -5.1287 | TTCACAGCTAAAAAA TCGC CTT GCAA CGATTTCTGATTTTT TERM 462 345776 - 345749 - T 100 -13.6 -3.67296 | opp_overlap 345740 345754, overlap 345754 TATGATTTAGCCAAA GGAAAGACACAA GGTC TTGTGCCTTTCC TTGCAAATTAATAAT Ctha_0303 347343 - 345784 - | Mg chelatase, subunit ChlI TERM 463 346694 - 346713 + g 72 -2.7 -5.07053 | overlap 346652 ATGTTGTGACTACCA GCGGCGG CTATTT CCATCGC TTTTTTCGCGTCGTT TERM 464 347092 - 347082 - G 71 -6.8 -4.15565 | CGCATGACGCCAAAA TGCC AAT GGCA AGCGAGAGGTCAAAC TERM 465 347394 - 347370 - R 90 -4.2 -5.75342 | opp_overlap 347358, overlap 347372 TGGGGTTAAAAAAAA CCTTTCTGCG TTGGG CGCAGAATCG ATGGGAAAAATACTG TERM 466 347566 - 347533 - R 100 -9.7 -6.3578 | ATGCGAAAAAAAAAA CAGGATAGCCATC TTTTCACT GATCGCTATCCTG CAGCTCATAAAATTG Ctha_0304 348863 - 347583 - | acetyl-CoA hydrolase/transferase TERM 467 347952 - 347993 + g 75 -10.9 -3.00774 | opp_overlap 347990 GTCGACTTCCAACGC GCTGTTAATCGCTGTGACT TTTG GGTTGCGGCGAATAACGGC TGTGTCGTTCACATA TERM 468 348828 - 348806 - G 78 -5.6 -4.82901 | opp_overlap 348826 CTGTGTGGATAAAAA CACGATCA CCGGATT TGATCGCG GAAACAGCTTCTTCG Ctha_0305 349155 - 350084 + | hypothetical protein TERM 469 350144 - 350110 - T 100 -13.6 -4.04023 | opp_overlap 350110 ACGAAGCAATAAGAA GCCGCCCAAAAATCAT GGA AAGATTTCAGGGCGGC TTTTTCTTTTAATTT TERM 470 350110 - 350144 + T 100 -11.4 -5.56372 | opp_overlap 350110 ACGAAGCAATAAGAA GCCGCCCAAAAATCAT GGA AAGATTTCAGGGCGGC TTTTTCTTTTAATTT Ctha_0306 350860 - 350183 - | hypothetical protein TERM 471 350903 - 350927 + H 78 -3.4 -5.47964 | overlap 350912 TTTGCCCGATTTGAT GCGCTGACGC AAAAA GAATCGGCGC TTTTTGTTGTTTTCT TERM 472 350993 - 351004 + H 76 -3 -5.38054 | GAACGCTATTGAGGG GAAA CCGA TTTC TTTTTATTTCTCCAA Ctha_0307 351118 - 351354 + | putative ferredoxin TERM 473 351444 - 351392 - T 81 -6.5 -5.00616 | gap 3, opp_overlap 351392 351394 351443, overlap 351394 TTTTTTTTGAAAAAA TAGCCCTGA-AGTC-TTCATGCAAGC CTGC GCT-GCACGGATGACTTTCAGGGCTG TTTTGTTTTTCGCGT TERM 474 351392 - 351444 + T 100 -8.7 -5.27023 | gap 3, opp_overlap 351392 351394, overlap 351394 351443 TTTTTTTTGAAAAAA TAGCCCTGA-AGTC-TTCATGCAAGC CTGC GCT-GCACGGATGACTTTCAGGGCTG TTTTGTTTTTCGCGT TERM 475 351442 - 351394 - T 79 -9.1 -4.13561 | gap 3, opp_overlap 351392 351394, overlap 351392 TTTTTTGAAAAAATA GCCCTGA-AGTC-TTCATGCAAGC CTGC GCT-GCACGGATGACTTTCAGGGC TGTTTTGTTTTTCGC TERM 476 351394 - 351442 + T 83 -9.1 -4.25502 | gap 3, opp_overlap 351394 351392, overlap 351392 TTTTTTGAAAAAATA GCCCTGA-AGTC-TTCATGCAAGC CTGC GCT-GCACGGATGACTTTCAGGGC TGTTTTGTTTTTCGC Ctha_0308 352300 - 351470 - | hypothetical protein Ctha_0309 352528 - 352334 - | hypothetical protein TERM 477 352543 - 352525 - G 76 -2.2 -5.44119 | opp_overlap 352533 352534 TCCAGTCTAAAAAAA GCATACCG GGG CGGGTCGC CGTTTATCATGGATT TERM 478 353439 - 353422 - g 72 -5.5 -4.43477 | opp_overlap 353438, overlap 353427 TTCACTCAAGCAAAA GCCAACG CGCT CGTCAGC GTGCGCTCATGCTTT TERM 479 353438 - 353451 + G 73 -4.5 -4.77036 | opp_overlap 353422 353427 CCAACGCGCTCGTCA GCGTG CGCT CATGC TTTTTGATCGTGGCA Ctha_0310 352581 - 353876 + | DEAD/DEAH box helicase domain protein TERM 480 353918 - 353901 - T 100 -11.3 -5.76949 | opp_overlap 353901 TAGCGCGAAAAAAAA GGCAGCT TGTG AGCTGCC TTTTTTATTGAATCC TERM 481 353901 - 353918 + T 100 -11.3 -5.4833 | opp_overlap 353901 TAGCGCGAAAAAAAA GGCAGCT TGTG AGCTGCC TTTTTTATTGAATCC Ctha_0311 355261 - 353942 - | SurA domain TERM 482 354664 - 354687 + g 76 -7.4 -4.20696 | overlap 354652 354651 354656 GAATGGCGTCCAGCG CCGATTGCTT CGAA AGGCTATCGG TTTTGGGCTTAATGA TERM 483 355174 - 355189 + g 71 -6.8 -4.08767 | TGCCATCCAACATTT CCTGCG CACT TGCAGG TTTTGAGAAACTGCC Ctha_0312 356142 - 355279 - | hypothetical protein TERM 484 355373 - 355387 + g 76 -7.8 -4.31688 | TTAATTTCGTCGTAG GCCGCT TCA AGTGGC TTTTCCGTTCCTGTT TERM 485 355820 - 355851 + g 80 -6.5 -4.82901 | opp_overlap 355821 355825, overlap 355821 TTCATTTCTATATCA ACAAAGCGCTGCA CGAAAA TGCGGCGCTTGGC TTTTTCTAAAAGCAC TERM 486 355821 - 355850 + g 75 -10 -3.49419 | opp_overlap 355821 355825, overlap 355820 TCATTTCTATATCAA CAAAGCGCTGCA CGAAAA TGCGGCGCTTGG CTTTTTCTAAAAGCA TERM 487 355846 - 355825 - G 76 -7.9 -4.29106 | opp_overlap 355821 355820, overlap 355821 TTCTATATCAACAAA GCGCTGCAC GAAA ATGCGGCGC TTGGCTTTTTCTAAA TERM 488 356181 - 356197 + r 72 -8.7 -3.23853 | opp_overlap 356180 356181, overlap 356179 AACGAAAATGAAAAG GCGGCTT TCA AAGTCGC TATTCATTCGAAAAC TERM 489 356241 - 356212 - R 100 -14.4 -4.14739 | opp_overlap 356210 356220, overlap 356213 CTATTCATTCGAAAA CGTAGAGACGCG GCAAAT CGCGTCTCTACA ACTCTTCAAATTTCA TERM 490 356240 - 356213 - R 100 -15.7 -3.08522 | opp_overlap 356210 356220, overlap 356212 TATTCATTCGAAAAC GTAGAGACGCG GCAAAT CGCGTCTCTAC AACTCTTCAAATTTC Ctha_0313 358537 - 356351 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 491 356655 - 356602 - G 72 -5.3 -4.56597 | gap 1, opp_overlap 356590 356613 356614, overlap 356582 CGGGCTTTCCAAAAA GCTTATCGACACGC-CGATTTTCACC ACG GTTGAAAATCGCGCTTTCCGCTGAGC CCAAGCTATCGGCAG TERM 492 356763 - 356785 + g 77 -3.3 -5.09426 | overlap 356764 AATTTTTGGAACTTC AGCTGCGAT TTTTT GTCGCGGCG TTTTTTGAGCTTGCG Ctha_0314 359509 - 358721 - | ABC transporter-related protein TERM 493 359545 - 359528 - R 73 -2.7 -5.32944 | GCGAGAATGAAAAAA TTTGCGA TGCG TTGCAAA GTAATGAATCGTTGG TERM 494 359617 - 359590 - R 78 -9.8 -3.32844 | opp_overlap 359590 TTTTTGATGGGAGAA CTCAGAGCAAGC CGTT GCAAGCTCTGAG TTTCTGGAAAAGATT TERM 495 359590 - 359617 + r 81 -9.8 -3.86194 | opp_overlap 359590 TTTTTGATGGGAGAA CTCAGAGCAAGC CGTT GCAAGCTCTGAG TTTCTGGAAAAGATT Ctha_0315 360695 - 359658 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 496 360982 - 360961 - R 91 -7.2 -5.24799 | opp_overlap 360961 GTAGAAATAGAAAAA GCCGCTAC CAAAAC GAAGCGGC TTTTTAGAGATTTGA TERM 497 360961 - 360982 + r 79 -7.2 -4.64657 | opp_overlap 360961 GTAGAAATAGAAAAA GCCGCTAC CAAAAC GAAGCGGC TTTTTAGAGATTTGA Ctha_0316 362346 - 361009 - | hypothetical protein TERM 498 361102 - 361123 + g 80 -7.3 -4.66953 | CCAATCGGCAAAACG GTTGGTGAG CGAG CTTGCCAAC TTTTTCCCATCTTCG TERM 499 362004 - 362022 + g 71 -3.8 -4.76088 | ATTCAAACTCTGCCG GATTATCG GTT CGGAAATC TTCTTTTTTAATTTG TERM 500 362630 - 362657 + r 89 -9.8 -4.57073 | opp_overlap 362645, overlap 362631 AATTGTAATGTTGAT AGTCCCTCTCCC AAAC GGAAGAGGGACA TTTTTACCAAAAATC TERM 501 362631 - 362656 + r 100 -13.3 -3.33922 | opp_overlap 362645, overlap 362630 ATTGTAATGTTGATA GTCCCTCTCCC AAAC GGAAGAGGGAC ATTTTTACCAAAAAT Ctha_0317 365343 - 362671 - | putative permease of ABC transporter TERM 502 362699 - 362709 + g 84 -8.2 -4.56597 | overlap 362692 CGCCGTCTCGCAACC GCCG TTC CGGC TTTTTCCCGGCGACG TERM 503 363003 - 363018 + g 78 -6.1 -4.66833 | TGTTCAGGCGGTCTT GCGCT TCCGAC AGCGC TTTTTCGGCTTCCAA TERM 504 363094 - 363120 + g 73 -2.2 -5.09895 | CACTTGTTTTTCCAG CGTCTCGAGCGT GCG ATGTTTCAGGCG TTTTTTGCGTAGCTC TERM 505 364260 - 364274 + g 73 -11.4 -2.52015 | overlap 364259 TGATGCCGAATTTTT CGCGTG CCT CACGCG CTTCGTCGCTATACG TERM 506 364840 - 364852 + g 72 -9.1 -3.60296 | opp_overlap 364840 GACGCCCAAAATAAA CGCGA TCG TCGCG TTTGCGGTCAGCATC TERM 507 364852 - 364840 - G 89 -9.1 -4.65933 | opp_overlap 364840 GACGCCCAAAATAAA CGCGA TCG TCGCG TTTGCGGTCAGCATC TERM 508 364986 - 364966 - G 72 -3.1 -5.06414 | overlap 364968 364971 GCTGCCCAAGAAAAA CAGCACCAC GAT GTGGCTCAG CGAAAGCACGAGCGA TERM 509 365305 - 365287 - G 78 -5.2 -5.00616 | CGGGTTGGTAAAAAA CAGACGCA AAT CGCGTTTG ATAAGGGCTGAAATC Ctha_0318 366111 - 365359 - | ABC transporter-related protein TERM 510 365673 - 365626 - G 76 -12 -2.57132 | gap 1, opp_overlap 365650, overlap 365625 365628 365650 CGGTTCGTCCATAAT CAGCACGTCCGGGTCGTG-AAGC AAG GCTTGCGCAAGCCCGACGCGCTG GCGATAGCCTTTCGA Ctha_0319 366450 - 366929 + | thioesterase superfamily protein TERM 511 366985 - 367008 + T 74 -9.5 -3.09286 | opp_overlap 366986, overlap 366984 TATTCCCCAAAAAAA AGGGCGAGC CCAACA GCTCGCCCA CTTTTGAGATCGTAT TERM 512 367007 - 366986 - T 100 -13.7 -5.75945 | opp_overlap 366985 366984 ATTCCCCAAAAAAAA GGGCGAGCC CAAC AGCTCGCCC ACTTTTGAGATCGTA Ctha_0320 367994 - 367038 - | Alcohol dehydrogenase zinc-binding domain protein TERM 513 367211 - 367193 - G 82 -7.4 -4.57341 | AAGCTCTTTCAAAAA GTTCTGGC TGT GCCACAAC CACCCGCATGGTGCA TERM 514 368315 - 368335 + H 70 -9.1 -3.13141 | opp_overlap 368314 368315, overlap 368314 368334 CAAAAGGTCAAAAAT CGAAAGTCA CTG TGATTTTCG TATCTTGCGCTTTTA TERM 515 371080 - 371068 - g 79 -7.7 -4.4891 | overlap 371077 GCGACGAGCAGAAAA GCGAT TAC ATCGC TAAGCATTTTGCAGA TERM 516 371363 - 371346 - g 78 -5.6 -4.77036 | overlap 371358 TTCGAGCATGAAAAA TTTGGC GAAGAA GCCAAA AAGGTTTTTGACGAC TERM 517 371775 - 371763 - g 82 -7.7 -4.7254 | opp_overlap 371763 ATGCTGCACGAAAAA GTTCG CCG CGAAC TTTGGGGCTATGCAA TERM 518 371958 - 371980 + G 72 -9 -3.54146 | overlap 371957 371959 GAAACTTGCGCGATG TCGCCGGCGG CGT CCGTCAGCGG TCTTTACTTCGCGCA TERM 519 371959 - 371979 + G 71 -10.3 -2.72166 | overlap 371958 371957 AAACTTGCGCGATGT CGCCGGCGG CGT CCGTCAGCG GTCTTTACTTCGCGC Ctha_0321 368442 - 372143 + | methionine synthase TERM 520 372194 - 372158 - f 79 -4.4 -5.252 | opp_overlap 372157 372158, overlap 372160 GACTGTCATAAAAAA CTGAGGAATCCATTCA AAACA CGGATGGATTCTTCGG CTTTCTAAACCAATT TERM 521 372158 - 372194 + F 77 -10.3 -2.91772 | opp_overlap 372158 372160, overlap 372157 GACTGTCATAAAAAA CTGAGGAATCCATTC AAAACAC GGATGGATTCTTCGG CTTTCTAAACCAATT TERM 522 372720 - 372710 - g 72 -2.6 -5.05116 | CGAGAAATAATAAAA TTTT TGA AAAA GCAGAATTGGAAGCA Ctha_0322 372277 - 372774 + | hypothetical protein TERM 523 373033 - 373002 - T 78 -9.6 -3.63627 | opp_overlap 373003 373010, overlap 373003 373010 CCGCGAGATTGTAAA CTCAAAAAGGGCTT CAAA AAGCCCTTTTTAAC TTATGCGATAATGAA TERM 524 373032 - 373003 - T 93 -13.1 -2.77962 | opp_overlap 373003 373010, overlap 373002 373010 CGCGAGATTGTAAAC TCAAAAAGGGCTT CAAA AAGCCCTTTTTAA CTTATGCGATAATGA TERM 525 373003 - 373032 + T 78 -10.9 -2.60212 | opp_overlap 373003 373002 373010, overlap 373010 CGCGAGATTGTAAAC TCAAAAAGGGCTT CAAA AAGCCCTTTTTAA CTTATGCGATAATGA TERM 526 373025 - 373010 - T 88 -9 -4.81249 | opp_overlap 373003 373010, overlap 373003 373002 TTGTAAACTCAAAAA GGGCTT CAAA AAGCCC TTTTTAACTTATGCG TERM 527 373010 - 373025 + T 88 -9 -4.78149 | opp_overlap 373010 373003 373002, overlap 373003 TTGTAAACTCAAAAA GGGCTT CAAA AAGCCC TTTTTAACTTATGCG Ctha_0323 373380 - 373057 - | hypothetical protein Ctha_0324 373979 - 373485 - | hypothetical protein Ctha_0325 375520 - 374195 - | TRAP dicarboxylate transporter, DctM subunit TERM 528 375435 - 375424 - G 81 -3.6 -5.42259 | GCACGCCGAAAAAAA GCGA TACG CCGC CGAGCGTGAATGCGA Ctha_0326 376049 - 375513 - | Tripartite ATP-independent periplasmic transporter DctQ component TERM 529 376201 - 376186 - R 70 -4.7 -4.56597 | TTTTTTTTGCAAAAA GCGTT TCTATC AACGC CGTTTCATTTTCAGT TERM 530 376284 - 376269 - R 79 -4.6 -5.24531 | overlap 376271 ATGCCGTAGAAAAAA GTCGCG CTAA CGAGAC GCGCCAATGAAAAAA TERM 531 376368 - 376357 - R 78 -7.2 -4.3898 | opp_overlap 376364, overlap 376364 ACCATCGCCATAAAA GCGG AAAG CCGC GCTGGAAATTTTTGG TERM 532 376364 - 376400 + r 77 -5.9 -4.70879 | gap 1, opp_overlap 376357 376364 CCATAAAAGCGGAAA GCCGCGC-TGGAAATT TTTGGC GATTTCCGTGCACGGC TTTTTGAAATTTGAG Ctha_0327 376683 - 376417 - | twin-arginine translocation protein, TatA/E family subunit Ctha_0328 378033 - 376828 - | Eco57I restriction endonuclease TERM 533 377417 - 377403 - G 80 -10 -3.85698 | opp_overlap 377410 TTTTTTCGTCATAAA GCCGAA GCG TTCGGC ACGACGATTTTTTTA TERM 534 377599 - 377574 - G 73 -2.4 -5.19328 | overlap 377575 ACGGGACAACAAAAA TCAGCTCGCC TGCGTC GCCGAGCCGC TTGACCGCCTGCTCG TERM 535 377917 - 377905 - G 87 -10.5 -4.17132 | AAATGCTTGAAGAAA CGGCG CAT CGCCG CAAGCAGGCTCTAAA TERM 536 377994 - 377980 - G 71 -7.1 -4.04149 | TAAGGACAGCATAAA CCGGA TCACT TCCGG GGGCGTGCTGACAGC Ctha_0329 378684 - 378043 - | phosphatidylserine decarboxylase related protein TERM 537 378640 - 378628 - G 75 -2.7 -5.1925 | GGATAACGCAAAAAA GATCA TGC TAATC ACAAGCGCTTGGCCG Ctha_0330 379420 - 378749 - | cytochrome c-type biogenesis protein CcmB TERM 538 379152 - 379141 - G 74 -7.2 -4.25283 | ACTTGCCGAGCAAAA CGGC GGTT GCCG GAACGCTAAGCTTTA Ctha_0331 380613 - 379444 - | DNA-directed DNA polymerase TERM 539 380156 - 380142 - G 72 -2.7 -5.04325 | opp_overlap 380150 380151 GCGAAAGGATAAAAA CGCGC TTTTT GCCCG CGAGCGGCTTGTAGG TERM 540 380569 - 380531 - G 100 -11.9 -5.63517 | gap 1, opp_overlap 380562 CCTGTAAACAAAAAA GCGTTCGGAAGGCGAT TGGTTTTT ATCGCCCTCCGAA-GC ACGGAAATTTGTCTT TERM 541 380645 - 380659 + r 72 -5.6 -4.60487 | overlap 380646 GCCGGTGTTGTTTTC GCTGAC GGC GGCAGC TTTTTCCGCCTCGTC Ctha_0332 381595 - 380621 - | branched-chain amino acid aminotransferase TERM 542 381648 - 381636 - R 72 -2 -5.28176 | TTTATTTATAAAAAA TTCA ATCAG TGAA ATACAAAGCAAATTC TERM 543 381735 - 381747 + r 72 -6.9 -3.90112 | ACTTCATTTCTGAAG GGGGG AAG CTCCC TTTACTTACGAAAGA Ctha_0333 382697 - 381927 - | phospholipid/glycerol acyltransferase Ctha_0334 382751 - 383056 + | Rhodanese domain protein Ctha_0335 383581 - 383078 - | protein tyrosine phosphatase Ctha_0336 384277 - 383594 - | membrane protein-like protein Ctha_0337 384888 - 384274 - | protein-L-isoaspartate O-methyltransferase TERM 544 385247 - 385232 - R 100 -6.1 -5.68438 | opp_overlap 385231 385225 385232 TTAGGAAATAAAAAA GCCTG ACAAAG CAGGC GATTTTATTGTGACT TERM 545 385303 - 385288 - R 74 -5.4 -4.72272 | CGTCTTCAGGAAAAA GCAGCA AATT TGCTAC GATTGCATCGCCACG Ctha_0338 386274 - 385300 - | DegV family protein TERM 546 385512 - 385483 - G 75 -2.7 -5.25772 | overlap 385477 385484 AAACGACAACAAAAA CGCATTGGTCATG AGCT CTTGACCGACGCC AGCATACGACATGCC Ctha_0339 386557 - 386985 + | ApaG domain protein TERM 547 387033 - 387005 - f 72 -6 -4.42386 | opp_overlap 387004 387007, overlap 387007 GCCTTATCCACAAAA TAGCCGCTCA AATAAACGA TGAGCGGCTG CTTTCCGAACCCGCT TERM 548 387031 - 387007 - f 76 -8.6 -3.82117 | opp_overlap 387007 387004, overlap 387005 CTTATCCACAAAATA GCCGCTCA AATAAACGA TGAGCGGC TGCTTTCCGAACCCG TERM 549 387242 - 387271 + G 85 -3.6 -5.61277 | gap 1, overlap 387239 AAGGAAAAGTTTTTC GCGCAG-CGCTAA CATTT TTAATGGCTGCGC TTTTCTTTTTTTCTC TERM 550 388326 - 388312 - g 78 -6.4 -4.62302 | GAACATTTCGAAAAA GCCAAA GCT TCTGGC GAAAATCCCGACGAG TERM 551 388402 - 388424 + G 70 -4.8 -4.42238 | opp_overlap 388397 388394 388402 388406 TCAGAAACCAGCAAA GCCATTTTGC TTG GCAAAAACGC TTTTGATTCGGGTCG Ctha_0340 387181 - 388812 + | Tetratricopeptide TPR_2 repeat protein Ctha_0341 389785 - 388790 - | glycosyl transferase family 9 TERM 552 389102 - 389083 - G 74 -7 -4.36127 | overlap 389076 CGCAACAAGCCAAAA GCGCAGCC GTTT GGCCGAGC GTACATTGCCCCGAA TERM 553 393016 - 392999 - g 74 -7.1 -4.23892 | CGCAACCACCGAAAA CTTGAAA GCGA TTTCAAG CCCGGGCGATGTGGT TERM 554 394424 - 394458 + G 70 -9.2 -3.3353 | opp_overlap 394405 394423 394421, overlap 394421 394419 AGCCGGCCAACACAT CGCCACTTTCAATGCG GCT CGTTTTGCAAGCGGCG TGTATTTCTACCGCC Ctha_0342 390141 - 394523 + | 5'-Nucleotidase domain protein TERM 555 394548 - 394595 + F 76 -5.7 -5.00895 | gap 2, opp_overlap 394555, overlap 394550 394552 TTTCCCTTGCTCATT TTTAGAACGCTCGAAGGATTGCA GCCC TGCG--CCTTCGGGCGTTCTGTG TTTTTATCTGATGGG TERM 556 394550 - 394593 + F 85 -10.5 -4.12748 | gap 2, opp_overlap 394555, overlap 394548 394552 TCCCTTGCTCATTTT TAGAACGCTCGAAGGATTGCA GCCC TGCG--CCTTCGGGCGTTCTG TGTTTTTATCTGATG TERM 557 394552 - 394591 + F 83 -10.9 -3.64281 | gap 2, opp_overlap 394555, overlap 394550 394548 CCTTGCTCATTTTTA GAACGCTCGAAGGATTGCA GCCC TGCG--CCTTCGGGCGTTC TGTGTTTTTATCTGA TERM 558 394813 - 394793 - g 79 -3.2 -5.4505 | overlap 394795 CGGTTGAAGAAAAAA GGCGATGA GCATG TCACCGAC AGCAGCGTGCTCAAA Ctha_0343 394730 - 395251 + | hypothetical protein TERM 559 395304 - 395272 - T 100 -12.1 -6.34424 | overlap 395252 TTCTCAAAAAAAAAA GGGGCTGCCGTTA GCTCCAA TAACGACAACCCC CCGACAGAAGCATGT Ctha_0344 396618 - 395344 - | nickel-dependent hydrogenase large subunit TERM 560 395570 - 395559 - G 74 -5.8 -4.6391 | opp_overlap 395559 395558 AACAATGATATAAAA TGCC TCTG GGCA CTTCTACTGCGCCGA TERM 561 396517 - 396493 - G 72 -2.8 -5.0133 | gap 1, opp_overlap 396481, overlap 396480 396497 396511 CATCGCTTCAAAAAA GCGAGGCGTTT CGAC AACCGCC-CAC TTGGCATCAACCAAT Ctha_0345 397372 - 396608 - | NADH ubiquinone oxidoreductase 20 kDa subunit TERM 562 396995 - 397008 + g 75 -6.7 -4.43208 | CACATCGCTCACTCG CCGAA CAGG TTCGG TTTCTTTGGGCATGT TERM 563 397331 - 397343 + g 86 -9.1 -4.5442 | opp_overlap 397331 397330 397328 GGTAAAATCAAACAC GCCGA CTT TCGGC TTTTGTAATTCAACG Ctha_0346 398297 - 397383 - | oxidoreductase FAD/NAD(P)-binding domain protein Ctha_0347 399330 - 398272 - | hydrogenase/sulfur reductase, beta subunit TERM 564 398681 - 398671 - GR 74 -5.4 -4.59773 | CTCGATGTCCAAAAA GCTT GGC AAGC CACTGACTTCCACAT TERM 565 399584 - 399561 - R 77 -6.8 -4.68124 | overlap 399556 399565 TGAATATAGAGAAAA GAAATTCGTT TTCT AACGAATGTC GGCAAGGAGTTGCCG TERM 566 399580 - 399565 - R 79 -6.2 -4.85653 | overlap 399556 399561 TATAGAGAAAAGAAA TTCGTT TTCT AACGAA TGTCGGCAAGGAGTT TERM 567 399584 - 399599 + r 100 -9 -5.34857 | TTTTCTAACGAATGT CGGCAA GGAG TTGCCG TTTTATTTTCTTTAA TERM 568 399660 - 399684 + r 79 -7.1 -4.60487 | opp_overlap 399660 ATTCCAAATAAAAAA TGGCGAATTTC AAT GAAAAACGCCA TTTTTCGCAATCATG TERM 569 399684 - 399660 - R 93 -7.1 -5.64421 | opp_overlap 399660 ATTCCAAATAAAAAA TGGCGAATTTC AAT GAAAAACGCCA TTTTTCGCAATCATG Ctha_0348 401351 - 399801 - | protease Do TERM 570 400108 - 400122 + g 83 -2.1 -5.75945 | GGTTCGGCGTCCAAC TTTGC GACAG GCGAA TTTTTTTTGAGCGCT TERM 571 400975 - 400943 - G 90 -10.5 -4.25104 | opp_overlap 400951, overlap 400948 CGCGGCTGATCAAAA CACCAGAACCGCTGC TGA GCATCGGTTCAGTTG GAGAGCGGAAAAACC TERM 572 400970 - 400948 - G 78 -12 -2.96321 | opp_overlap 400951, overlap 400943 CTGATCAAAACACCA GAACCGCTGC TGA GCATCGGTTC AGTTGGAGAGCGGAA Ctha_0349 402190 - 401411 - | DNA repair protein RecO TERM 573 402740 - 402720 - g 76 -8.2 -4.07568 | CTCGGCCCGTCAAAA GGCGGCGT GCGCT ACGCCCCC GATGTGACGCTGGAC Ctha_0350 402453 - 403760 + | Glu/Leu/Phe/Val dehydrogenase TERM 574 403928 - 403955 + T 100 -15 -5.96219 | CGGGTGATAAGGGTG GGCTTGCTGAGA TGCT TTTCAGCAAGCC TTTTTTTTATCCCTA TERM 575 404203 - 404230 + T 100 -15 -5.96219 | CGGGTGATAAGGGTG GGCTTGCTGAGA TGCT TTTCAGCAAGCC TTTTTTTTATCCCTA TERM 576 404481 - 404508 + T 100 -15 -5.65927 | CGGGTGATAAGGGTG GGCTTGCTGAGA TGCT TTTCAGCAAGCC TTTTTTATTTAGATG Ctha_0351 405647 - 404547 - | D-alanine/D-alanine ligase TERM 577 405412 - 405424 + g 72 -2.7 -5.0917 | AGCACAATCTCTTTT TCTAT CAA ATGGA TTTCTTTTTTGGTAG Ctha_0352 406381 - 405680 - | glycosyl transferase family 2 TERM 578 406064 - 406082 + g 74 -3.8 -5.00884 | overlap 406065 CGTGCAAAGTGCGTG AGCCATTT CGC GAATGGCA TTTTTTGAAAGCCGT TERM 579 406133 - 406115 - G 72 -6.6 -4.2461 | opp_overlap 406126 ATCGGCATGAAGAAA CAGTAGCG CGT CGCCGCTG GCCTGCTGTGCGCCG TERM 580 406199 - 406189 - G 73 -2.4 -5.14563 | opp_overlap 406194 406195 GCGCCGACGAAAAAA GCCG AAT CGGA AACCGACTTTCGCGC Ctha_0353 407967 - 406438 - | surface antigen (D15) TERM 581 406662 - 406645 - G 74 -5.5 -4.66163 | ACCCGCATCGAAAAA GGCCGTT AGGA AAAGGCC GTATTGCACAATGGA TERM 582 407365 - 407353 - G 71 -7.7 -3.91072 | TGAAATGCCCACAAA CGGAT CGT ATCCG AGCCCAAAAGACGTG Ctha_0354 408420 - 407989 - | CoA-binding domain protein TERM 583 408054 - 408066 + g 72 -4.7 -4.62069 | opp_overlap 408054, overlap 408055 CCACTACCGCTAAAT TCGCG TTG CGCGC TTTTTCGGCTGCCGC TERM 584 408613 - 408602 - g 70 -2.2 -5.00616 | gap 1, opp_overlap 408588 TTCCGTTTGAAAAAA CG-GC TTC GCTCG ACACCATCAGTTCTC TERM 585 409051 - 409092 + G 91 -8 -5.25803 | opp_overlap 409075 409076, overlap 409052 CGGCAAATCAACGAT TTTGAACGCATGCTTGCC GAAACA GGCACGCGTGTGCTCAAG TTTTTTCTCCACATT TERM 586 409052 - 409091 + G 76 -9.3 -3.74397 | opp_overlap 409075 409076, overlap 409051 GGCAAATCAACGATT TTGAACGCATGCTTGCC GAAACA GGCACGCGTGTGCTCAA GTTTTTTCTCCACAT Ctha_0355 408571 - 409395 + | protein of unknown function DUF344 TERM 587 409474 - 409484 + G 79 -3.2 -5.40072 | overlap 409476 AGTTCGATTCGGCAC TTGC GCA GCAG TTTTTTTCCGAAAAA TERM 588 409516 - 409501 - g 72 -3.2 -5.00616 | opp_overlap 409476, overlap 409503 409505 TTTTTTCCGAAAAAA TCCAGC GCTT GCTGCA ATCCGAACGCGCTGC TERM 589 409636 - 409665 + G 84 -7.8 -4.77036 | gap 1, opp_overlap 409622, overlap 409638 AGCGCGGCATCGATG TGGTGCG-CCGCC CCACT GGCGGACGCGCAA TTTTTCATGCTGGAG TERM 590 409638 - 409663 + G 71 -10.4 -2.66962 | gap 1, opp_overlap 409622, overlap 409636 CGCGGCATCGATGTG GTGCG-CCGCC CCACT GGCGGACGCGC AATTTTTCATGCTGG Ctha_0356 409392 - 410198 + | biotin/lipoate A/B protein ligase TERM 591 410248 - 410274 + T 83 -10.8 -3.53444 | opp_overlap 410235 CATGCAAGCGCTTAT TGGGCTTGCGCT CGC AGCGCATGGCCA TTTGCAGAGAAATCC TERM 592 410320 - 410335 + T 77 -6.2 -4.82901 | TCGCGGTTTTCGTAG GCTTTT TCCC AAAAGC TTTTTATGGCCAAAA Ctha_0357 411096 - 410302 - | glycosyl transferase family 2 TERM 593 411667 - 411657 - g 77 -6.8 -4.41348 | opp_overlap 411666 CGCGGCGCAAACAAA GGCA GCT TGCC GGAGTATCTTTCTGG TERM 594 411730 - 411712 - g 72 -8.8 -3.64703 | opp_overlap 411720 GCGCTGTGATGCAAA CGCCCGAA GCG CTCGAGCG CGCTGCTTACGAACA TERM 595 412027 - 412014 - g 75 -9.5 -3.61398 | TTGGCCGGCGAAGAA GGCGG CTAT CCGCC AAAAAAGCATTTGAG Ctha_0358 411474 - 412580 + | adenosine deaminase TERM 596 413816 - 413832 + G 89 -6.5 -5.27923 | GGACTACAAAGCAGC GCTTGAG CAT CACAAGC TTTTTTATGCCGTTA Ctha_0359 412740 - 414560 + | diguanylate cyclase and serine/threonine protein kinase with TPR repeats Ctha_0360 415699 - 414557 - | queuine tRNA-ribosyltransferase TERM 597 416643 - 416658 + G 73 -4.6 -4.82901 | overlap 416644 GCAAATGATTTCGGA TGTGCC GGTA GGCGCG TTTTTGTCGGGCGGA TERM 598 417258 - 417238 - g 71 -6.9 -4.09685 | CCTGATGGCTTAAAA CAAATTCTC GCC GAGCATTTG TTCCAAACGGATTTT Ctha_0361 415873 - 417798 + | asparagine synthase (glutamine-hydrolyzing) Ctha_0362 417842 - 419023 + | hypothetical protein TERM 599 419132 - 419106 - g 70 -10.2 -2.51937 | overlap 419105 419125 AATTGAAACAGAGAG GGCATGAAGTAA TAG TAACTTCACGCC AATATGCGCAAACGC TERM 600 419333 - 419347 + G 73 -10 -3.4158 | ATTGCCGCTTGGATG CTTGGG ATT CCCAAG TTGCTGCTTTTTGAC Ctha_0363 419027 - 420070 + | protein of unknown function DUF354 TERM 601 420074 - 420058 - f 73 -8.1 -3.61764 | opp_overlap 420058 TGAGCAACTTGTAAA GAAATCA TTC TGATTTC TACTTTTGCGAGGTT Ctha_0364 420166 - 421650 + | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase Ctha_0365 421688 - 422692 + | oxidoreductase domain protein TERM 602 422737 - 422726 - g 77 -3.6 -5.13473 | AGCATATCCAAAAAA GCCA CAAT CGGC AAAAATGTGCAAATC Ctha_0366 422708 - 423463 + | hypothetical protein Ctha_0367 423456 - 423725 + | acyl carrier protein TERM 603 424882 - 424903 + G 80 -10.1 -3.86346 | opp_overlap 424880 GAAAAAGAACTTACG GCGCATTGC AACC GCCATGCGC TTTCTGCAAACATGA Ctha_0368 423706 - 424983 + | AMP-binding domain protein TERM 604 425355 - 425329 - gf 74 -8.8 -3.5774 | ACTTAACCTCCCAAA TTCTGATGACCA AGT TGGTCGTCAAAA AAATGCTGCTTGGTG TERM 605 425624 - 425640 + GF 71 -6.5 -4.12456 | overlap 425639 GGAGCTTACAACGCC CGAGCAA ATT TTGCCCG TTTTGGAAATGCTCT Ctha_0369 424986 - 425717 + | short-chain dehydrogenase/reductase SDR TERM 606 425773 - 425788 + G 72 -9 -3.50853 | overlap 425776 ACGATTTGCAATTCG CCGGAA GCGT TTCCGG TTCTCCTTGCCCCCC TERM 607 425917 - 425935 + G 71 -3.9 -4.84017 | overlap 425919 TGGATGGCTTCACGC TATCATC TAACC GATGATG TTTTTCTGAAAAGTT Ctha_0370 425692 - 426159 + | hypothetical protein Ctha_0371 427249 - 426164 - | TPR repeat-containing protein TERM 608 426713 - 426685 - G 73 -11 -2.62613 | opp_overlap 426685, overlap 426667 426684 426682 GCTTAGCGTAAAGAT CGCCCCGAAGTT TATAC AACTCCGGGTCG TATGCTTCTTTGCCA Ctha_0372 430559 - 427371 - | peptidase S41 TERM 609 427805 - 427815 + g 71 -6.8 -4.08945 | CGTAGCCGATTCGCC GCTG CGC CAGC TTTTCCAACAGTAAT TERM 610 428055 - 428067 + g 71 -3.3 -4.77757 | overlap 428054 AATCGGCTTGATTCG CACGC GGC GCATG TTTTCCTTTTTCGCG TERM 611 428221 - 428234 + g 74 -8.1 -3.9122 | CCCGGCGTGTGCAAC GGCGA CGCT TCGCC TTCTTTCCAAAAATC TERM 612 428250 - 428279 + g 76 -2.2 -5.28778 | gap 1, opp_overlap 428248 428250, overlap 428249 TTCTTTCCAAAAATC GCCTTTG-GGCAA GCCGG TTACTTCAAAGGC TTTTTTCTCCGTGCT TERM 613 429185 - 429199 + g 72 -2.8 -5.01546 | GATGCGTTTTGCCTG TTTTCG TGT CGTAAA TTTTTATCTCCGTTT TERM 614 430459 - 430438 - G 82 -11.5 -3.55563 | AGTCCAGCGGTCAAA CGCCGAGCG ACGC CGCCCGACG CCTCAACCGTCCAAA Ctha_0373 431175 - 430603 - | metal dependent phosphohydrolase Ctha_0374 432697 - 431177 - | Lytic transglycosylase catalytic TERM 615 432930 - 432903 - R 85 -7 -5.0916 | opp_overlap 432903 432900 TTTTTAATAGAAAAA GGCCTTCCTT TTAAAAGG ATGGAAGGCC TCGTTTAAAAGAAAC Ctha_0375 435043 - 432971 - | hypothetical protein TERM 616 434711 - 434721 + g 73 -4 -4.88222 | opp_overlap 434711 AGAAGGCACATTTAA TATC AAC GATA TTTTTCCATTTTCAT TERM 617 435174 - 435195 + r 71 -6.7 -4.19238 | opp_overlap 435177, overlap 435177 AACCAGATAAAATAT TAATTAGGA TGAT TCCTAATTG TTTTAAAATTAAGCA TERM 618 435177 - 435192 + r 70 -6.2 -4.21933 | opp_overlap 435177, overlap 435174 CAGATAAAATATTAA TTAGGA TGAT TCCTAA TTGTTTTAAAATTAA Ctha_0376 436393 - 435212 - | glycosyl transferase family 2 TERM 619 435789 - 435775 - G 72 -2.7 -5.08824 | TTCGGATGGAAAAAA GCTCG CCCGC CGCGC CGACCACCGAATGCA Ctha_0377 437361 - 436399 - | glycosyl transferase family 2 TERM 620 437990 - 438043 + H 100 -26.3 -2.79796 | opp_overlap 437993 438002, overlap 437993 438002 TGATAAGAATGCTAC CAAGTCGGCAAACGTAGAGACACAT GGCA GTGCGTCACTACGTTTGCCGACTTG TATAGTAGAATCAAA TERM 621 437993 - 438040 + H 100 -22.2 -3.54951 | opp_overlap 437993 438002, overlap 437990 438002 TAAGAATGCTACCAA GTCGGCAAACGTAGAGACACAT GGCA GTGCGTCACTACGTTTGCCGAC TTGTATAGTAGAATC TERM 622 438040 - 437993 - H 100 -23.7 -3.20367 | opp_overlap 437993 437990 438002, overlap 438002 TAAGAATGCTACCAA GTCGGCAAACGTAGAGACACA TGGCAG TGCGTCACTACGTTTGCCGAC TTGTATAGTAGAATC TERM 623 438031 - 438002 - H 74 -8.6 -3.58037 | opp_overlap 437993 437990 438002, overlap 437993 TACCAAGTCGGCAAA CGTAGAGACACA TGGCAG TGCGTCACTACG TTTGCCGACTTGTAT TERM 624 438368 - 438389 + H 79 -8.7 -4.14004 | gap 1, opp_overlap 438357, overlap 438368 GCAAGCGGTCTTCGT CTC-TGCCGG AGA CCGGCACGGG TTTATGCTTCTATTG TERM 625 438368 - 438388 + H 70 -8.9 -3.07318 | opp_overlap 438357, overlap 438368 GCAAGCGGTCTTCGT CTCTGCCGG AGA CCGGCACGG GTTTATGCTTCTATT Ctha_0378 438466 - 438909 + | hypothetical protein Ctha_0379 438929 - 439177 + | hypothetical protein TERM 626 440269 - 440279 + G 72 -8.2 -3.70853 | TCCTGACTGCCGACC CGGC ATT GCCG TTATTAGATGATTGG TERM 627 440478 - 440467 - g 74 -7.2 -4.27316 | GCGGGCAAGGCAAAA CGGC GCTT GCCG GAAAATTGGCGCGTG TERM 628 440692 - 440703 + G 89 -4.4 -5.75945 | TGAACCGGCATAAGG GCAA GCTT TTGC TTTTTTTTGACAACT TERM 629 441160 - 441195 + G 78 -5.2 -4.98255 | overlap 441161 CCTTGCTGGAGCGCC TGCCCGCTTACCGCAC ACCC GCGCCGAAAGAGGGCG TTTTTGTGCTTGCGC Ctha_0380 439206 - 442733 + | Tetratricopeptide TPR_2 repeat protein TERM 630 442756 - 442789 + T 74 -9.6 -3.08032 | opp_overlap 442761, overlap 442761 AATCAGGGATAATCA AAAAAGGCTACCGC CTGTTC GCGGGAGCCTTTTG TCGTTTTGCCCGAAC TERM 631 442761 - 442784 + T 88 -9.5 -4.67635 | opp_overlap 442761, overlap 442756 GGGATAATCAAAAAA GGCTACCGC CTGTTC GCGGGAGCC TTTTGTCGTTTTGCC TERM 632 442784 - 442761 - T 100 -9.5 -5.32944 | opp_overlap 442761 442756 GGGATAATCAAAAAA GGCTACCGC CTGTTC GCGGGAGCC TTTTGTCGTTTTGCC Ctha_0381 443754 - 443137 - | putative acetyl transferase Ctha_0382 445022 - 443751 - | glycosyl transferase group 1 TERM 633 443887 - 443897 + g 70 -2.4 -5.00616 | overlap 443889 TCTTCCCATGTGTTG GCCG ACG CGAC TTTTTTCCGCGCCGC Ctha_0383 445930 - 445019 - | glycosyl transferase family 2 TERM 634 445152 - 445137 - G 75 -2.6 -5.14965 | overlap 445139 AGCCCGATGAAAAAA TATTTC GGGC GAAACA GATATTTGAGCGTCG TERM 635 445292 - 445280 - G 76 -4.1 -5.04601 | overlap 445273 GTGATAAAGCAAAAA TTCGC TTT GCAAA ATTTTCATCCGGCCT TERM 636 445501 - 445512 + g 74 -7.2 -4.24432 | overlap 445498 TGCAGGTCGGCAAGG CCGG ATGG CCGG TTTCATTTTCAATTT Ctha_0384 447243 - 445927 - | polysaccharide biosynthesis protein TERM 637 446104 - 446086 - G 74 -10.2 -3.14211 | AGTTTCCGTTAGGAA CGGCGCAA TCA CCGCGCCG TAAAGCCCGACGGTT TERM 638 446331 - 446319 - G 72 -6.3 -4.32583 | overlap 446310 TGAAGAGCAAAATAA TTTGC TCG GCAAA CAGGGCGATGACCGC TERM 639 447153 - 447120 - G 82 -7.4 -4.57837 | gap 1, overlap 447108 447121 ATAGCGCGGTAAAAA CGCTCCACGCGCCGA CATCT TCGG-GCGTGTAGAG CCGCGTCACCAACAC TERM 640 447154 - 447121 - G 73 -9.6 -3.3422 | gap 1, overlap 447108 447120 TAGCGCGGTAAAAAC GCTCCACGCG-CCGA CATCT TCGGGCGTGTAGAGC CGCGTCACCAACACG Ctha_0385 448625 - 447570 - | glycosyl transferase group 1 TERM 641 448217 - 448246 + g 81 -3.5 -5.44721 | opp_overlap 448217 448220, overlap 448226 TGGATTTTTGCGAAA CCACGATAATTGC ATCA GCAATTTCCGTCG TTTTTTTCAGCTCAT Ctha_0386 449724 - 448630 - | glycosyl transferase group 1 TERM 642 449301 - 449311 + g 90 -6.8 -5.44119 | CGGAAACCATGACGA GCGT GAA ACGC TTTTTTTGAAATCGC Ctha_0387 451229 - 449721 - | hypothetical protein TERM 643 450391 - 450380 - G 82 -5.8 -5.1485 | CAAGCAAGACAAAAA GCGT GGCC ACGC GATAAAACCATTTCT TERM 644 451027 - 451016 - G 80 -5.8 -5.07652 | overlap 451017 451018 TCGTTGAAAACAAAA TCGG CGCG CCGA CCGCACCCGCGATGA Ctha_0388 452472 - 451210 - | Glycosyltransferase-like protein TERM 645 451522 - 451506 - G 76 -4.3 -4.9218 | opp_overlap 451512 TAGGCACCACAAAAA GCTGCAA CGA TCGCGGC GGTCGATATAGTGAA TERM 646 451634 - 451647 + g 100 -8.1 -5.60993 | TATTGCACACCCAGC CAGCG CGTT CGCTG TTTTTTTATCGCAGC TERM 647 452396 - 452382 - G 80 -6.4 -4.83269 | ATAGCACACCAAAAA GAATGG TTG CCATCC AATAAAATGAGTAGA Ctha_0389 454724 - 452469 - | Uncharacterized protein involved in exopolysaccharide biosynthesis-like protein TERM 648 452557 - 452573 + g 73 -7.9 -4.08767 | opp_overlap 452542 452556, overlap 452559 452562 452564 TGCTTGGCGATCAAG CGCAGCT TTG AGCGGCG TTTTGAAACGCTGCC Ctha_0390 455451 - 454735 - | hypothetical protein Ctha_0391 456921 - 455707 - | response regulator receiver protein TERM 649 456734 - 456760 + g 71 -7.5 -3.86944 | gap 1, opp_overlap 456734 456736, overlap 456755 ATGTCTGTCAAAGTA TATTCCGAGATG ATAG CATCT-GGAATA TTTCCTGCTTGTAGC Ctha_0392 457408 - 457031 - | response regulator receiver protein Ctha_0393 458494 - 457664 - | Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains-like protein TERM 650 458704 - 458691 - R 76 -3.9 -5.1861 | opp_overlap 458691 GGTACGATGAAAAAA TCAAA CAAG TTTGA TTTTTTTTATTTTGC TERM 651 458691 - 458704 + r 100 -3.9 -6.34616 | opp_overlap 458691 GGTACGATGAAAAAA TCAAA CAAG TTTGA TTTTTTTTATTTTGC Ctha_0394 459892 - 458711 - | glycosyl transferase family 9 TERM 652 459386 - 459423 + g 70 -5 -4.44046 | gap 1 AAGCCGTCGCAACAT TTCCAAGTAAAGCTGCG CCACA TGCCGTTTT-CTTGGAA TTTCTTTCAGATCGA Ctha_0395 461249 - 459957 - | hypothetical protein Ctha_0396 461848 - 461297 - | hypothetical protein Ctha_0397 462491 - 462015 - | hypothetical protein TERM 653 462153 - 462142 - G 70 -2.2 -5.03227 | ATAGGACAAATAAAA GGCT TCTC AACC CCTGCTGCATCAAGA Ctha_0398 463274 - 462558 - | Roadblock/LC7 family protein TERM 654 462870 - 462917 + g 72 -5 -4.57581 | gap 1, overlap 462876 462879 TGCTCCTTGAATGTC GGT-AGATTGTTGCAGAAGTTCT TGC AGGGCTTCAGCAATGATTTCGCC TTTCTTCTTTACCAT Ctha_0399 463699 - 463298 - | hypothetical protein TERM 655 463656 - 463668 + g 72 -2.6 -4.99638 | AATATTTTTGTGAGC TCGG CTGAA CCGG TTTTTGTATAGGTAT Ctha_0400 464299 - 463709 - | putative gliding protein MglA Ctha_0401 464830 - 464303 - | Roadblock/LC7 family protein TERM 656 464432 - 464448 + g 88 -3.7 -5.77853 | TTGATAATCGCTCTC TTGACAA TTA TCGTCAA TTTTTTTTGCAGCTT Ctha_0402 466694 - 465426 - | protein of unknown function DUF214 TERM 657 466459 - 466447 - G 71 -3.3 -4.79352 | TTATCCACAACAAAA GCACG ACG CGTTC CCTTATCGTTGCTAA TERM 658 467571 - 467559 - g 91 -7.7 -5.1286 | overlap 467561 CAAAAAGTAGAAAAA GTTCG CTA CGAAC GAAAATATGGCATCG Ctha_0403 466839 - 467984 + | isopentenyl-diphosphate delta-isomerase, type 2 TERM 659 468103 - 468117 + F 70 -2.8 -5.06414 | overlap 468090 CTGAGCGCTTCCCAA GGTG ATAGGCG CACC TTTTTATTCCCACAC TERM 660 469182 - 469170 - g 71 -3.4 -4.84761 | ACACTTTCAGAAAAA CTTC CTAAC GAAG CTGGCCGCGAAGCTT Ctha_0404 468231 - 469238 + | Polyprenyl synthetase TERM 661 469252 - 469281 + T 100 -15.9 -5.45802 | AACCTTCTTTTACTT GGCAATTGACCAG CGAT TTGGTCAATTGCC TTTTTATTTTCAAAA Ctha_0405 470664 - 469291 - | hypothetical protein TERM 662 470394 - 470376 - G 77 -10.4 -3.31196 | GCAAATTCACATCAA TTTCAGCA TCG TGCTGAAA AACAACATGCAGTAT TERM 663 470806 - 470748 - R 79 -10.7 -3.30513 | gap 3, overlap 470756 GAAAGAAACAGTTAA CCGGAAAAGCCCC-AGTAGC-AAAATTA GCAAAG TAATTTAAGCTACTTGGGGCT-CTCCGG TCACCCAAAATGAAA TERM 664 470799 - 470756 - R 73 -7 -4.19953 | gap 2, overlap 470748 CAGTTAACCGGAAAA GCCCC-AGTAGC-AAAATTA GCAAAG TAATTTAAGCTACTTGGGGC TCTCCGGTCACCCAA Ctha_0406 471173 - 470832 - | nitrogen regulatory protein P-II Ctha_0407 472541 - 471201 - | ammonium transporter TERM 665 472520 - 472532 + g 89 -6.3 -5.3671 | GCAACAGCATGAGCT TTGGA GAG TCCAA TTTTTTCATTATCTT TERM 666 472588 - 472617 + r 100 -15.9 -5.4505 | opp_overlap 472583 472595 GTAAGTAAATTTTCA GGGGAAATGCAAT GGCA GTTGCATTTCCCC TTTTTTATTAGCAAC Ctha_0408 473702 - 472635 - | hypothetical protein TERM 667 473768 - 473755 - R 72 -5.2 -4.78839 | opp_overlap 473755 AATGTTAGAATAAAA GGCG AAACAA CGCC TTGGTGCGTAATTAA TERM 668 474230 - 474259 + r 85 -10.1 -4.13767 | overlap 474239 474257 TTTCACATTTTTTTT GTAGAAACGCGCA CATC TCTGCGTTTCTAC TTTTGCGGTCAAAAA Ctha_0409 476365 - 474281 - | Peptidylprolyl isomerase TERM 669 474678 - 474661 - G 85 -5.5 -5.40072 | opp_overlap 474661 CTTCGCGCAAAAAAA GCTCGAT TTCA ATCGCGC CTTTGTCTGTTTCGA TERM 670 475842 - 475831 - G 71 -7.2 -4.03234 | TTGTGCTGAGATAAA GCGC TACC GCGC GCTGAGCCGCTTCGG Ctha_0410 478054 - 476537 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 671 478072 - 478082 + r 78 -3.2 -5.40072 | CTCAAACATGAATGA GGTT GTG AGCC TTTTTTTCAACGAAA Ctha_0411 479260 - 478286 - | hypothetical protein TERM 672 478989 - 479007 + g 86 -11 -3.71645 | overlap 478990 TAGTGAAGGTCATCT TGAACGCG CTC CGCGTTCG TTTCGCTATGGCGTT TERM 673 478990 - 479006 + g 79 -12.3 -2.82505 | overlap 478989 AGTGAAGGTCATCTT GAACGCG CTC CGCGTTC GTTTCGCTATGGCGT Ctha_0412 480221 - 479337 - | protein of unknown function DUF58 TERM 674 479788 - 479768 - G 83 -6.1 -5.0925 | overlap 479769 GGCGAAAATGAAAAA TGTCGCGCA AAA TCCGCAACA CGTGGCTGCGACCTT TERM 675 479852 - 479862 + g 77 -6.8 -4.47707 | opp_overlap 479851 TAAAAATCATCAAGC CGAC TTT GTCG TTATTTTTGATGGCG TERM 676 480128 - 480096 - G 79 -10.5 -3.54424 | opp_overlap 480098 GCGCACTTCGGCAAA TTCCATTCCGCGCCC TTT GAACGCGGAGTGGTA TTCGCCGCTGAAAAT TERM 677 480098 - 480126 + g 75 -10.9 -3.03124 | opp_overlap 480096 GCACTTCGGCAAATT CCATTCCGCGCCC TTT GAACGCGGAGTGG TATTCGCCGCTGAAA Ctha_0413 480494 - 480318 - | hypothetical protein Ctha_0414 484197 - 481108 - | heavy metal efflux pump, CzcA family TERM 678 481723 - 481778 + g 79 -9.6 -3.76968 | gap 1, opp_overlap 481723, overlap 481762 AAGCTCTTCGACATA GCTGCCGATGTCGCGCCCGTCGATG TTGCACT CGACGACGAGC-CGGCGTTGGCTGC TTTCGTGGCTGACTT TERM 679 481973 - 481985 + g 83 -10.5 -3.77241 | overlap 481980 TCCGTCGCAACCTTG CCGCC GAC GGCGG TTTCAATTGCCGTTT Ctha_0415 485396 - 484230 - | efflux transporter, RND family, MFP subunit TERM 680 484801 - 484777 - GR 76 -4.2 -5.00616 | opp_overlap 484789 484796, overlap 484778 CGGGCGCTTAAAAAA CCGGAAATCG GTGCG CGAATCCCGA CGCTCGTTACCCGCG TERM 681 484796 - 484824 + gr 100 -12.4 -5.90981 | opp_overlap 484778 484777, overlap 484789 AAATCGGTGCGCGAA TCCCGACGCTCG TTACC CGCGTGTCGGGA TTTTTTTTCATGTCC Ctha_0416 485664 - 485359 - | hypothetical protein TERM 682 485900 - 485910 + r 81 -6.8 -4.92239 | TCATATTCAACATTT CGCT CTA AGCG TTTTTAAATTTTTCC Ctha_0417 487164 - 485914 - | outer membrane efflux protein TERM 683 487307 - 487272 - H 70 -7 -3.82528 | gap 1, opp_overlap 487270 487279 AATTTTAAAAACCAA GGTATG-ATTTTTGAGC GAG GCTCAAAAATGCGTTCC GAATTTGCGTTTCGC TERM 684 487279 - 487299 + H 78 -11.3 -2.54387 | opp_overlap 487272, overlap 487270 AAAACCAAGGTATGA TTTTTGAGC GAG GCTCAAAAA TGCGTTCCGAATTTG TERM 685 488224 - 488201 - g 73 -11 -2.53263 | gap 1 TCGATCCCGAATCCA CGCAGCG-GCG CGG CGCTCACTGCG ACCGGGAAGTGCGGC Ctha_0418 487471 - 489138 + | protein of unknown function DUF87 Ctha_0419 489183 - 489524 + | membrane protein of unknown function TERM 686 489912 - 489896 - g 71 -3.7 -4.89966 | ACATCGAAAAAGAAA TTCGC TTGATCG GCGAA GACAAAGAATTGCTG Ctha_0420 489583 - 490938 + | hypothetical protein Ctha_0421 492031 - 491072 - | hypothetical protein TERM 687 492126 - 492086 - R 79 -10.5 -3.21872 | opp_overlap 492085 492086, overlap 492090 CGCAAATATAGCCAA GCGACGCGGTGCG-GACAA CCCTT TTGACTCGC-CCGCATCGC CTTTAACATGACACG TERM 688 492160 - 492150 - R 73 -4 -5.07567 | TGACACGCCAAAAAA CTTT TTC AAAG CGTCACTCAGATAAA Ctha_0422 493056 - 492220 - | glutamate racemase Ctha_0423 494430 - 493084 - | Tetratricopeptide domain protein TERM 689 494526 - 494540 + r 73 -6.4 -4.24204 | CCAATCGCAAATCCT GTCGGT TTT ATCGAC TTTTCAGTCTACATG TERM 690 494624 - 494590 - R 100 -14.5 -3.62491 | opp_overlap 494598, overlap 494591 494598 494615 AAAAAAGGGTGTAAA CTCACAAAGCCTTTC GAATA GAAAGGCTTTGCGAA AACGAGTATTTGTTC TERM 691 494623 - 494591 - R 100 -15.8 -2.7641 | opp_overlap 494598, overlap 494590 494598 494615 AAAAAGGGTGTAAAC TCACAAAGCCTTTC GAATA GAAAGGCTTTGCGA AAACGAGTATTTGTT TERM 692 494598 - 494616 + r 74 -8.9 -3.53091 | opp_overlap 494591 494590 494598 494615 GTGTAAACTCACAAA GCCTTTC GAATA GAAAGGC TTTGCGAAAACGAGT TERM 693 494616 - 494598 - R 79 -8.9 -4.02132 | opp_overlap 494598, overlap 494591 494590 494615 GTGTAAACTCACAAA GCCTTTC GAATA GAAAGGC TTTGCGAAAACGAGT Ctha_0424 494912 - 494667 - | regulatory protein, FmdB family TERM 694 495029 - 495019 - R 71 -6.8 -4.07568 | overlap 495004 TGCGCTCCTTGAAAA CGCA ACA TGCG CCAAGAATGTTTCAG Ctha_0425 495877 - 495122 - | hypothetical protein TERM 695 495660 - 495638 - G 76 -9.2 -3.75153 | TGCGCCTAATTGAAA TTCCTTTTGG TCG CCAAGAGGAA TGGCAGCCTGAACTG TERM 696 495781 - 495767 - G 76 -4.2 -5.00616 | overlap 495769 GGCGTCTTCAAAAAA CGTCTG GAA CAGATG AACCTGATCAAATGT Ctha_0426 496425 - 496009 - | hypothetical protein TERM 697 496255 - 496239 - G 80 -7.3 -4.62069 | TCTCCAGTTCAAAAA TTCTGAC GCC GCCAGAA ATCCCAACCACGTAA Ctha_0427 496685 - 498016 + | ATPase AAA-2 domain protein TERM 698 498041 - 498079 + T 93 -11.1 -5.06414 | opp_overlap 498046, overlap 498046 ACAAGAAACCTAACA AAAAAGCCTGCTTCGTC TCAGC GATGAAGCAGGCTTTCG TTTTTCTTCAGCGAA TERM 699 498074 - 498046 - T 100 -13.2 -5.52096 | opp_overlap 498041 498046 AAACCTAACAAAAAA GCCTGCTTCGTC TCAGC GATGAAGCAGGC TTTCGTTTTTCTTCA TERM 700 498046 - 498074 + T 100 -15.4 -4.43037 | opp_overlap 498046, overlap 498041 AAACCTAACAAAAAA GCCTGCTTCGTC TCAGC GATGAAGCAGGC TTTCGTTTTTCTTCA Ctha_0428 499602 - 498106 - | Na+/H+ antiporter NhaA TERM 701 498872 - 498861 - G 76 -2.2 -5.27335 | CTGCCCAAACAAAAA TGCC AACC AGCA AGTAAGCCGTCAAAG TERM 702 498947 - 498933 - G 77 -3.5 -5.16841 | GCACACCAAGAAAAA CAGCC GCAAT GGCTA AATAGGAAAGATAGA TERM 703 499928 - 499905 - R 100 -6.7 -5.7946 | opp_overlap 499881 499878, overlap 499881 CTGCCAAGAAAAAAA GCGTGGC TTTTACTTCG GCCACGC TAATGAAAATGTATT Ctha_0429 502057 - 499961 - | dehydrogenase E1 component TERM 704 501243 - 501228 - G 77 -10.4 -3.43203 | TTATCAGAAGAGGAA TGCGGC AGCA GCCGCA CCACAGAAGCACGAA TERM 705 501482 - 501455 - G 76 -4.8 -4.86621 | ATCTTCAATTAAAAA GACAACCGGCAA TTTT TCGCGAGTTGCC CAATTGAGCGCTTCA Ctha_0430 502828 - 502103 - | lipoate-protein ligase B TERM 706 504118 - 504095 - g 88 -7.4 -4.98436 | opp_overlap 504116, overlap 504096 TGAACACGAGAAAAA TCAGTCGCTC AGCA AAGCGACTGG CGCGAAATACTTTGG TERM 707 504117 - 504096 - g 82 -10.9 -3.57977 | opp_overlap 504116, overlap 504095 GAACACGAGAAAAAT CAGTCGCTC AGCA AAGCGACTG GCGCGAAATACTTTG Ctha_0431 503355 - 504449 + | glycosyl transferase family 9 TERM 708 505080 - 505103 + G 71 -6.8 -4.08692 | TTTTTGGCTACATTC GCAAATACAA AGGA TTGGATTTGC TTTTGGACGCGCTTC Ctha_0432 504446 - 505591 + | glycosyl transferase group 1 TERM 709 505661 - 505637 - T 91 -8.6 -4.85782 | opp_overlap 505637 505640 GCTGCCAAAAACAAA CAACTCCGGC AAATG ACCGGAGTTA TTTTATACAAACATT TERM 710 505640 - 505658 + T 76 -7.4 -4.30995 | opp_overlap 505637, overlap 505637 GCCAAAAACAAACAA CTCCGG CAAATGA CCGGAG TTATTTTATACAAAC Ctha_0433 508124 - 505713 - | DNA topoisomerase I TERM 711 505999 - 505988 - G 71 -7.2 -4.1891 | CCTCGCGAAGATAAA GCGG CGCG CCGC AATTCGGGCAGGCAA TERM 712 507945 - 507962 + g 76 -4.2 -5.0133 | CTCGTAATGGTGCTC GAAATC AAGACC GATTTC TTTTTTCGGCAAATC Ctha_0434 509140 - 508280 - | hypothetical protein TERM 713 508675 - 508705 + g 76 -2.5 -5.40072 | CGATGTAGATGAATT TCAGCTTATCGGA AAAAC TTCGCTGCGCTGA TTTTTTTAACGCCAC Ctha_0435 509936 - 509223 - | cobalt transport protein TERM 714 509985 - 509995 + r 70 -8.2 -3.25823 | opp_overlap 509984 509983 509985 TGGCCGAAACAAATC GCCG CGA CGGC TTCGTATCGCGCGAC Ctha_0436 511674 - 510022 - | ABC transporter-related protein TERM 715 511293 - 511312 + g 71 -3.6 -4.82901 | gap 1 TTTCAAGGCCGACTT GCTCAAGCG CGG CGTTT-AGC TTTTTATCGAACAGC TERM 716 511873 - 511889 + H 90 -2.9 -5.8901 | ACGTTATGAAGTTGC GGCTTAT TAA AAGAGCC TTTTTTGTTTTCTCT Ctha_0437 511928 - 512779 + | hypothetical protein TERM 717 512904 - 512951 + F 95 -12.4 -4.33258 | opp_overlap 512904 512913 512927 512928, overlap 512938 512943 TTGACTTCGATGAGA TGACAATGATTTTGTTGTTAAA AGTT TTTGACAACAAACTTGTTGTCA TTTATATTTGACAAT TERM 718 512983 - 512927 - f 82 -9.2 -4.07687 | gap 1, opp_overlap 512904 512938 512943, overlap 512913 512904 512928 512969 ATTTTGTTGTTAAAA GTTTTTGACAACAAACTTGTTGTCA TTTATATT TGACAATAATTTTGTTGTC-AAAAC AAAAGGAGGGCAAAA TERM 719 512983 - 512928 - f 73 -9.4 -3.04398 | opp_overlap 512904 512938 512943, overlap 512913 512904 512927 512969 TTTTGTTGTTAAAAG TTTTTGACAACAAACTTGTTGTCA TTTATATT TGACAATAATTTTGTTGTCAAAAC AAAAGGAGGGCAAAA TERM 720 513132 - 513101 - g 72 -2.8 -5.00895 | opp_overlap 513100 GGCATCACATAAAAA GCGGCGCGCATA TTGTTTTC TCAGCGCCCCGC CGTGTGGGCAAAACC Ctha_0438 512998 - 514206 + | hypothetical protein TERM 721 514243 - 514256 + F 73 -3.7 -5.0538 | ACAAACAAATGAGTG CCGTC CTGT GCCGG TTTTTTCCAATGCGG TERM 722 515642 - 515658 + G 73 -4.3 -4.82901 | overlap 515630 515632 CATGCCTCGCACCAT GCTCGGC TTG GTAGAGC TTTTTCTGAAGCAGC TERM 723 517539 - 517529 - g 74 -6.8 -4.30576 | GCTCTATGAGGAAAA CCGT AAT ACGG AAAAAGCTTATTCTC Ctha_0439 514875 - 517976 + | TPR repeat-containing protein Ctha_0440 519154 - 518630 - | hypothetical protein TERM 724 519263 - 519248 - R 85 -10.4 -3.88291 | CATGAGTTGTATAAA GCCGCA AGCT TGCGGC GAAATGCTTCAAATT Ctha_0441 520156 - 519278 - | Methyltransferase type 11 TERM 725 519394 - 519417 + g 73 -9.6 -3.36492 | opp_overlap 519384 519403 ACGCACGAATCTGCT CGTCCAAATC GTCC GGTTTGGGCG TTATGGCATTGGCGA TERM 726 519570 - 519555 - G 75 -3.2 -5.24531 | opp_overlap 519541 519566, overlap 519556 ATCGCGTAGAAAAAA TGCGAA TTGC TTCGCT CGCGACGCGCGCCGG Ctha_0442 520761 - 520279 - | hypothetical protein TERM 727 520821 - 520775 - R 100 -8.3 -6.0427 | gap 1, opp_overlap 520790 ATGACAGAAAAAAAA TCATGTCATTCTGAATGGCA AAAACTCA TGCCATTCTGAATGA-ACGA AAGCTAATGTCATTC Ctha_0443 523383 - 521080 - | TonB-dependent receptor plug TERM 728 521160 - 521142 - G 76 -8.8 -3.66356 | opp_overlap 521140 ATTCGTAATGCCAAA GCCGATAC TTC GTGTCGGC CAGATTTTTTCCGAT TERM 729 523542 - 523532 - R 79 -4 -5.37345 | TGTAAGGATAAAAAA TATC GCT GATA AATCACAAAAGTGTA TERM 730 523671 - 523627 - R 100 -16.1 -4.48987 | opp_overlap 523632 523634, overlap 523634 CGCTTAGAATCAAAA TAAAAAAGCGCTTATCAGTTA GGC TAATTGATAAGCGCTCTTTCA AGATATGACTGTGAA TERM 731 523632 - 523666 + r 100 -13.8 -3.5944 | opp_overlap 523627 523634, overlap 523634 AGAATCAAAATAAAA AAGCGCTTATCAGTTA GGC TAATTGATAAGCGCTC TTTCAAGATATGACT TERM 732 523664 - 523634 - R 100 -14.2 -5.85244 | opp_overlap 523634 523632, overlap 523627 AATCAAAATAAAAAA GCGCTTATCAGTTA GGC TAATTGATAAGCGC TCTTTCAAGATATGA TERM 733 523634 - 523664 + r 100 -16.4 -3.37487 | opp_overlap 523627 523634, overlap 523632 AATCAAAATAAAAAA GCGCTTATCAGTTA GGC TAATTGATAAGCGC TCTTTCAAGATATGA Ctha_0444 524534 - 523713 - | peptidase M48 Ste24p Ctha_0445 525446 - 524649 - | tRNA pseudouridine synthase A TERM 734 525293 - 525310 + g 73 -2.1 -5.14965 | gap 1 GGCAAAGCACCGATT CAATCTCA CCC TGA-ATTG TTTTTTGATGCAAAT TERM 735 525634 - 525593 - gH 72 -9.5 -2.8552 | overlap 525592 GGCGATTCAGGAAAT TCTTGCAACGCCGAAACAA GCAT TTGCACCGGCCTTGCAAAA CGACTGGACGAAATC TERM 736 527047 - 527024 - gH 71 -6.7 -4.1585 | gap 1, opp_overlap 527037, overlap 527026 CTACAACTGGCAAAA CACGAACGGC ATGGA GCCGCTCG-G CGCGTTTATCAAACA TERM 737 527046 - 527026 - gH 83 -10.4 -3.67402 | opp_overlap 527037, overlap 527024 ACAACTGGCAAAACA CGAACGGC ATGGA GCCGCTCG GCGCGTTTATCAAAC TERM 738 527330 - 527343 + GH 70 -2.3 -4.92239 | GGCATCGTTTTCCGC TGGCG AGTT CGCAA TTTTTGAATTTTTAA TERM 739 527383 - 527399 + GH 82 -8.1 -4.21768 | GGTTTTCTTACGAGC TTGAAGT CGA ACTTCAA TTTTCAGATTACTTA Ctha_0446 525450 - 527462 + | alpha amylase catalytic region Ctha_0447 527435 - 528346 + | PfkB domain protein TERM 740 528359 - 528392 + F 100 -14.7 -5.47159 | opp_overlap 528365, overlap 528360 TAACATCGGGCATTG AGCAGAGGGAAAAGC TCGG GCTTTTCTCTCTGCC TTTTTGTTTATTGAC TERM 741 528360 - 528391 + F 100 -18.2 -3.86668 | opp_overlap 528365, overlap 528359 AACATCGGGCATTGA GCAGAGGGAAAAGC TCGG GCTTTTCTCTCTGC CTTTTTGTTTATTGA TERM 742 528878 - 528858 - g 70 -5.3 -4.54727 | opp_overlap 528877, overlap 528834 528852 CTTGCTAAAGCAAAA GGCGCGC GCTTTTT GCTCGCC TCCACTTCTGAGGTT TERM 743 529409 - 529392 - g 71 -7.7 -3.97088 | CCCGATAACACCAAA GCCAAAG AACG CCTTGGC TGGGAGCCGACCATC Ctha_0448 528525 - 529487 + | NAD-dependent epimerase/dehydratase Ctha_0449 529526 - 530410 + | Methenyltetrahydrofolate cyclohydrolase TERM 744 530459 - 530511 + T 83 -7.2 -4.85599 | opp_overlap 530460 530462, overlap 530460 530462 CTTGATCCTTGAAAA ACTTGCTTCTCACAGATTGG-GCA ACAGGTA TGCGCCAGTCTGTGAG-AGCATGG TTTTTATACGATGCA TERM 745 530460 - 530510 + T 81 -10.7 -3.50877 | opp_overlap 530460 530462, overlap 530459 530462 TTGATCCTTGAAAAA CTTGCTTCTCACAGATTGG-GCA ACAGGTA TGCGCCAGTCTGTGAG-AGCATG GTTTTTATACGATGC TERM 746 530510 - 530460 - T 86 -8.5 -4.58395 | opp_overlap 530460 530459 530462, overlap 530462 TTGATCCTTGAAAAA CTTGCTTCTCACAGATTGG-GCA ACAGGTA TGCGCCAGTCTGTGAG-AGCATG GTTTTTATACGATGC TERM 747 530508 - 530462 - T 74 -9.7 -2.60508 | opp_overlap 530462 530460 530459, overlap 530460 GATCCTTGAAAAACT TGCTTCTCACAGATTGG-GCA ACAGGTA TGCGCCAGTCTGTGAG-AGCA TGGTTTTTATACGAT TERM 748 530462 - 530508 + T 89 -11.9 -3.32317 | opp_overlap 530460 530462, overlap 530460 530459 GATCCTTGAAAAACT TGCTTCTCACAGATTGG-GCA ACAGGTA TGCGCCAGTCTGTGAG-AGCA TGGTTTTTATACGAT Ctha_0450 530803 - 530558 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein Ctha_0451 531220 - 530951 - | hypothetical protein Ctha_0452 531743 - 531288 - | protein of unknown function DUF134 TERM 749 532258 - 532273 + G 82 -5.4 -5.14563 | AGCCGATTTATTTTT TCTTCG GGCG CGAGGA TTTTTTGATCGAAGA TERM 750 532510 - 532484 - g 70 -8.8 -3.30124 | TCGCAGCCGCGAGAA GCAAAAAGCGCA AAC CGCACTTTTTAC TGAATACCTCAAAAA TERM 751 533188 - 533178 - g 71 -6.8 -4.11692 | GATTTAGCGCTAAAA GGCA TTT TGCC CATTCAGGATGAAAA Ctha_0453 532185 - 533243 + | DNA polymerase III, delta subunit Ctha_0454 533365 - 534333 + | CHAD domain containing protein Ctha_0455 534498 - 534950 + | GCN5-related N-acetyltransferase TERM 752 534994 - 534967 - T 93 -10.6 -5.06414 | opp_overlap 534989 TTTTTCGAATAAAAA TGGGCGATACGC TTTC ACCTATCGCCCA TGCCGTTTCCATTTT Ctha_0456 536796 - 535042 - | succinate dehydrogenase, flavoprotein subunit TERM 753 535529 - 535539 + g 71 -6.8 -4.13748 | GCATTTTCCTGAACC GGCA TGA TGCC TTTGGTCTTTTTCAC TERM 754 535999 - 536011 + g 72 -4.8 -4.59773 | overlap 535979 ACGCTCCATGAAGCG CTCG CCTTT CGAG TTTTTCAAGATGCCA TERM 755 536341 - 536329 - G 79 -7.7 -4.48741 | opp_overlap 536334 GAACTCATCATAAAA TCGCA CGT TGCGA CGAACGCTTTGCTCA TERM 756 536434 - 536465 + g 72 -6.5 -4.27316 | gap 1, opp_overlap 536452, overlap 536435 CGCTTCGCCGAAATT GCGCGTA-TGCCCG CCAAA CGGGCGCTGCGCGA TTTTACCTTCGGGCG TERM 757 536435 - 536464 + g 71 -10 -3.16068 | gap 1, opp_overlap 536452, overlap 536434 GCTTCGCCGAAATTG CGCGTA-TGCCCG CCAAA CGGGCGCTGCGCG ATTTTACCTTCGGGC TERM 758 536814 - 536830 + r 74 -8.7 -3.52177 | overlap 536810 CAGTCTTACTCCTCT TGCTTGC CCT GCAAGCG TTGGATTTTTTAAGA TERM 759 536838 - 536848 + r 70 -2.6 -5.07652 | TGCAAGCGTTGGATT TTTT AAG AAAA TTTTATTTTAAAGCC Ctha_0457 537369 - 536851 - | succinate dehydrogenase, membrane subunit, putative TERM 760 537304 - 537290 - G 72 -8.6 -3.76968 | AAGTGACCGATTAAA GTTGCT AAA AGCAAC ATGCCGGAAATGCGC Ctha_0458 537839 - 537396 - | succinate dehydrogenase, cytochrome b556 subunit TERM 761 537810 - 537827 + g 80 -6.9 -4.59109 | overlap 537806 TTTCAGCTTTGCCGC GAGCCGG GGTT CCTGCTC TTTTTCCGCCATATA Ctha_0459 540296 - 538035 - | TPR repeat-containing protein TERM 762 538341 - 538327 - G 73 -2.1 -5.20154 | gap 1, opp_overlap 538336 ACATAAGGCAAAAAA GCGTCA GGAT TG-CGC CGCGCGAGTTGTCGT TERM 763 538479 - 538465 - G 73 -2.1 -5.20154 | gap 1, opp_overlap 538474 ACATAAGGCAAAAAA GCGTCA GGAT TG-CGC CGCGCGAGTTGTCGT TERM 764 538617 - 538603 - G 76 -2.1 -5.4387 | gap 1, opp_overlap 538612 ACATAAAGCAAAAAA GCGTCA GGAT TG-CGC CGCGCGAGTTGTCGT TERM 765 538755 - 538741 - G 73 -2.1 -5.20154 | gap 1, opp_overlap 538750 ACATAAGGCAAAAAA GCGTCA GGAT TG-CGC CGCGCGAGTTGTCGT TERM 766 538893 - 538879 - G 70 -2.1 -5.02476 | gap 1, opp_overlap 538888 ACATCGGGCAAAAAA GCGTCA GGAT TG-CGC CGCGCGAGTTGTCTA TERM 767 539031 - 539017 - G 73 -2.1 -5.20154 | gap 1, opp_overlap 539026 ACATAAGGCAAAAAA GCGTCA GGAT TG-CGC CGCGCGAGTTGTCGT TERM 768 539169 - 539155 - G 70 -2.1 -5.02476 | gap 1, opp_overlap 539164 ACATTGGGCAAAAAA GCGTCA GGAT TG-CGC CGCGCGAGTTGTCTA TERM 769 539634 - 539622 - G 72 -4.8 -4.57341 | AATCGTCTCTAAAAA CGAG GCCAG CTCG GTATTGCCTTCGGCC Ctha_0460 540888 - 540484 - | hypothetical protein TERM 770 541739 - 541761 + G 79 -12 -3.20723 | GCGATGCTGGCTTGT GCGAGAATCG GTG CGATTCACGC TTCCGTTCATACAGG Ctha_0461 541289 - 543121 + | AMP-dependent synthetase and ligase Ctha_0462 543329 - 543574 + | glutaredoxin 2 TERM 771 543758 - 543774 + G 84 -8 -4.84921 | AAAATCCTCAATGTT TTGCGC TTCCC GCGCAA TTATTTTTTCTTCTA TERM 772 543817 - 543854 + G 84 -10.8 -3.89354 | opp_overlap 543816 543815 CAACAACACCAAATT TCTGAAATCAGCCT TGCGGCAAAT GGGCTGATTTCAGA TTATTCATTTCAGAA Ctha_0463 543589 - 544239 + | deoxynucleoside kinase Ctha_0464 544303 - 544509 + | hypothetical protein TERM 773 544603 - 544618 + F 100 -6.1 -5.99154 | opp_overlap 544603 TACCTTAAGTTAAAA GTGGG AAAAAC CCCAC TTTTTTTATTTACTC TERM 774 544618 - 544603 - f 73 -6.8 -4.2803 | opp_overlap 544603 TACCTTAAGTTAAAA GTGGGA AAAA CCCCAC TTTTTTTATTTACTC Ctha_0465 544654 - 545202 + | protein of unknown function DUF150 TERM 775 545865 - 545854 - g 73 -2.2 -5.1615 | overlap 545845 CGAATACGGAAAAAA TGCC GAAA GACA ATCCGCGCAAAACGC Ctha_0466 545268 - 546863 + | NusA antitermination factor TERM 776 547694 - 547662 - g 77 -10.7 -3.45839 | opp_overlap 547664 547679, overlap 547665 AGGCTGAAACACCAA CAACAGAAGCATCTT CTG AAGAAACTTCTGCTG TAATGACAAAAGAGG TERM 777 547691 - 547665 - g 77 -8.8 -3.8613 | opp_overlap 547664 547679, overlap 547662 CTGAAACACCAACAA CAGAAGCATCTT CTG AAGAAACTTCTG CTGTAATGACAAAAG TERM 778 548253 - 548243 - g 84 -8.2 -4.62904 | AAAGAGCGCGAAAAA CCGG CTG CCGG AAAAAAAGAGCAAAC TERM 779 549349 - 549335 - g 74 -5.6 -4.61873 | opp_overlap 549334 549335 CTCGATAAAGGAAAA GGTGTC ATT GCCACC ATCTTGGTTCAAACC Ctha_0467 546986 - 550279 + | translation initiation factor IF-2 TERM 780 550286 - 550303 + F 85 -9.9 -4.07687 | opp_overlap 550286 550281 GTTAGTTAAAGCGAA GCAGGTT TTCA AACCTGC TTTTCGCGGAGGAGT TERM 781 550303 - 550286 - f 78 -9.9 -3.29324 | opp_overlap 550286, overlap 550281 GTTAGTTAAAGCGAA GCAGGTT TTCA AACCTGC TTTTCGCGGAGGAGT TERM 782 550571 - 550594 + G 74 -6.8 -4.37092 | opp_overlap 550571 550576, overlap 550586 AAAATTCGTCATCAA TTTAAGCGGA TGCC TTCGCTTGAA TTTTATCAAGACGAT TERM 783 550699 - 550657 - g 76 -8.4 -4.06502 | overlap 550661 GATTCGCAAAGCAAA CGAAGCCTCATCGCCCACCC CAA AGCCGGACGATGAAGCTTAA CATTCTAAAGTTCCA TERM 784 550695 - 550661 - g 82 -11.4 -3.65514 | overlap 550657 CGCAAAGCAAACGAA GCCTCATCGCCCACCC CAA AGCCGGACGATGAAGC TTAACATTCTAAAGT Ctha_0468 550322 - 550699 + | ribosome-binding factor A Ctha_0469 551742 - 550720 - | von Willebrand factor type A TERM 785 550793 - 550759 - G 100 -10.8 -4.8622 | GTTTGCAAGCAAAAA TTCTAACGCCAGCA AAATCAA CGCTGGCGTGAGAA ACATGGCAAACTCTT TERM 786 551367 - 551354 - G 78 -6.7 -4.71426 | opp_overlap 551354 CGTTGATGAATAAAA TCCGT CGCA ACGGA TTTGGCCGCCTCAAT TERM 787 551672 - 551655 - G 72 -6.3 -4.35361 | CATAATAAAAGTAAA TTCCGCT GAGC AACGGAA TGAGCAAAAAGAGAA Ctha_0470 553700 - 551886 - | oligopeptide transporter, OPT superfamily TERM 788 552894 - 552882 - G 82 -7.7 -4.67038 | TTCGGAAAACCAAAA TTCGC TTT GCGAA TCGGGAATCGCCACC TERM 789 553439 - 553456 + g 84 -10.5 -4.0127 | CGGAAATGATGGATG CCGCCGC CGAC GCGGTGG TTTGATTGTAGGTAT Ctha_0471 554638 - 554024 - | response regulator receiver protein Ctha_0472 554786 - 556489 + | Electron-transferring-flavoprotein dehydrogenase TERM 790 556542 - 556513 - T 100 -15.8 -5.36441 | TTTTGAGATAAAAAA GGCGAAGCGACC AGGAAA AGTCGCTTCGCC CCAAAAAAAGAGAAA Ctha_0473 557763 - 556579 - | Cytochrome b/b6 domain TERM 791 557596 - 557582 - G 70 -2.1 -4.99043 | TTTTTAGAAAGAAAA TGAAC AATTG GCTCA AACACATAACTTCTT Ctha_0474 558552 - 557767 - | Rieske (2Fe-2S) domain protein TERM 792 558461 - 558443 - G 73 -7.4 -4.13767 | overlap 558446 CGTCTCATTCCAAAA GAAGTGGC TTC GTCACTTC CCGAATCTATTGAGC TERM 793 558738 - 558765 + r 70 -8.6 -3.19026 | opp_overlap 558737 558736 558756, overlap 558756 CAACCCATGACAACC TTGATTTGCG CCAACAAA CGCAAATCAA TTGCGTATTAAGGTA Ctha_0475 559433 - 558912 - | hypothetical protein TERM 794 560108 - 560092 - g 72 -6.5 -4.25283 | ACTTGGCGACCAAAA CGGCATC ATC GATGGCG TCAGTCTCAATATCG Ctha_0476 559640 - 560569 + | Ppx/GppA phosphatase TERM 795 560704 - 560718 + F 79 -4.3 -5.1925 | CTAAATGAAGATTTT CCTAA TTTAT TTAGG TTTTTTGCGTTCTAC TERM 796 560867 - 560884 + GF 70 -7.1 -3.80877 | overlap 560853 560865 TGCTCGGCTTACCGA TCTTTTC TTAG GAAAAGA TGTTTTGTGGACTAA Ctha_0477 560841 - 561119 + | hypothetical protein Ctha_0478 561091 - 561774 + | two component transcriptional regulator, winged helix family Ctha_0479 562867 - 561926 - | Muramoyltetrapeptide carboxypeptidase TERM 797 562656 - 562633 - G 83 -2.2 -5.63517 | overlap 562635 CTCGCAAACAAAAAA TAGCCGTCAC GTCC GGGTCGGCAA ACATGCGGTTCAAGT TERM 798 562654 - 562635 - G 70 -4.8 -4.45696 | overlap 562633 CGCAAACAAAAAATA GCCGTCAC GTCC GGGTCGGC AAACATGCGGTTCAA TERM 799 562931 - 562885 - R 72 -2.3 -5.24129 | gap 1, overlap 562889 562913 CTCTTTTATAAAAAA TGAAGGGCTACCAAAACCCACC CGAA GATGT-TTTTGGTAGCCCAAAA TCAAATATAGACCGG TERM 800 562927 - 562889 - R 95 -11.9 -3.99236 | gap 1, overlap 562885 562913 TTTATAAAAAATGAA GGGCTACCAAAACCCACC CGAA GATGT-TTTTGGTAGCCC AAAATCAAATATAGA Ctha_0480 563216 - 562956 - | H+transporting two-sector ATPase delta/epsilon subunit Ctha_0481 564619 - 563222 - | ATP synthase F1, beta subunit Ctha_0482 565079 - 566131 + | Radical SAM domain protein Ctha_0483 566115 - 566993 + | protein of unknown function DUF52 TERM 801 567090 - 567105 + F 73 -6.8 -4.26792 | opp_overlap 567090 GGGATTTGTACCTAA CGAGCG AATA CGTTCG TTTTGACATTTCTCT Ctha_0484 567152 - 567619 + | hypothetical protein TERM 802 567801 - 567816 + G 72 -3.2 -5.03227 | overlap 567799 GTTTTGCGGCTGCCG GCGG ACTTCGCG CCGC TTTTATTTATGATCT Ctha_0485 567686 - 568639 + | WD-40 repeat protein TERM 803 568652 - 568689 + F 100 -13.7 -4.12532 | gap 1, opp_overlap 568658, overlap 568658 TAGCCTCGCAGGATG GGAAAAGTCGCTTGCAAA CTA TTTGCA-GCGGCTTTTTC TTTATCTCTCAAAAA TERM 804 568658 - 568683 + F 100 -9.1 -5.4433 | gap 1, opp_overlap 568658, overlap 568652 CGCAGGATGGGAAAA GTCGCTTGCAAA CTA TTTGCA-GCGGC TTTTTCTTTATCTCT TERM 805 568683 - 568658 - f 73 -6.9 -4.15565 | gap 1, opp_overlap 568658 568652 CGCAGGATGGGAAAA GTCGCTTGCAAA CTA TTTGCA-GCGGC TTTTTCTTTATCTCT Ctha_0486 568906 - 569367 + | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein Ctha_0487 569411 - 570124 + | GTP cyclohydrolase I TERM 806 570153 - 570172 + F 83 -5.7 -5.4756 | opp_overlap 570153 CAATTTTTCTTACAA GCAGGTT TTTCAC AGCCTGC TTTTTTATTGCCATT Ctha_0488 570203 - 571015 + | polysaccharide deacetylase TERM 807 571327 - 571315 - g 72 -4.7 -4.56597 | opp_overlap 571316 571322, overlap 571316 TTGGCTTTGCAAAAA GCGCG TTC CGCGT TCGGTTGCGGCATTT TERM 808 571870 - 571901 + G 71 -3.6 -4.85599 | gap 1, overlap 571872 TGGAATCAAATATCC GC-TGGTGCTTGCCA TTA TTGCCGGCGCCATGC TTTTTGTGCCCTACA TERM 809 571908 - 571922 + G 79 -2.8 -5.31519 | GCGCCATGCTTTTTG TGCC CTACATC GGCA TTTTTATTTCGGTCT Ctha_0489 571022 - 572236 + | protein of unknown function UPF0118 Ctha_0490 574219 - 572336 - | PAS/PAC sensor hybrid histidine kinase TERM 810 573130 - 573112 - G 70 -8.8 -3.42574 | opp_overlap 573126 CCAAGTTCATCACAA CCTGCTCA ATC TGAGCCGG ATCGGCTTTGACGCG TERM 811 573644 - 573662 + g 77 -3.9 -5.2015 | gap 1 CCACTGTTTTTTCGC GCTGATGG TGTC CCAT-AGC TTTTTGTATTCTTCC Ctha_0491 576325 - 574238 - | putative PAS/PAC sensor protein Ctha_0492 578394 - 576664 - | hypothetical protein TERM 812 578324 - 578314 - G 83 -2.4 -5.75342 | GGGCTGCAAAAAAAA CGCG CTG CTCG CTAAAAGGACAACCC Ctha_0493 579667 - 578534 - | glycosyl transferase family 2 TERM 813 580134 - 580113 - g 73 -7.9 -4.17132 | AAATCTCCGAACAAA TGGACGCAC GCAT GCGCGACCA AGCCTGGGATTTTCT TERM 814 581262 - 581252 - g 79 -8.2 -4.19735 | GTTCGCAAAATTAAA GCCG GGC CGGC AACGCTCGAGCGCGT TERM 815 581850 - 581838 - g 95 -2.7 -6.15536 | AATTAACAAAAAAAA TCAAA GGA TTCGA TAGCGATTTTGAAGT Ctha_0494 579881 - 581980 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 816 582758 - 582740 - g 72 -3.1 -5.0538 | GTTTATTTGAAAAAA GCGGT CGAGCTGGC ACCGC AAATGACCTATTATC TERM 817 582899 - 582883 - g 75 -2.9 -5.18726 | overlap 582890 CGCCGATAAGAAAAA CGAGAAA CAG CTTCGCG AACTGCTGGAAGACA Ctha_0495 582113 - 582925 + | hypothetical protein TERM 818 583633 - 583615 - g 76 -8.8 -3.77196 | CGATGATGGACGAAA CCGGCGAT CTG ATCGTCGG CGCGATCTACAATCC TERM 819 583678 - 583690 + G 78 -4.7 -5.02074 | opp_overlap 583678 TTTTTACCGCACAAC GCGGC AAA GGCGC TTTTTTCAACAATCA TERM 820 583883 - 583897 + G 74 -5.6 -4.61231 | overlap 583885 GGCCTACACGGCGTG CGGTCG CTA CGACGG TTTTTGGGAATATCA Ctha_0496 583293 - 584093 + | Inositol-phosphate phosphatase TERM 821 584140 - 584169 + F 75 -9.3 -3.33696 | overlap 584141 584165 584166 TCAGGGCGTGCTATT TTGCCGGTTTCTT TCTT AGGAAACCGGCGC TTGCTTAACACAAGC TERM 822 584141 - 584168 + F 89 -12.8 -2.60075 | overlap 584140 584165 584166 CAGGGCGTGCTATTT TGCCGGTTTCTT TCTT AGGAAACCGGCG CTTGCTTAACACAAG TERM 823 584165 - 584188 + F 79 -4.6 -5.24531 | gap 1, overlap 584141 584140 584166 CTTTCTTAGGAAACC G-GCGCTTG CTTAACA CAAGCGCTC TTTTTTATAAAACCT TERM 824 584166 - 584186 + F 82 -8.3 -4.25873 | overlap 584141 584140 584165 TTTCTTAGGAAACCG GCGCTTG CTTAACA CAAGCGC TCTTTTTTATAAAAC TERM 825 584969 - 584954 - g 73 -4.6 -4.83169 | opp_overlap 584962, overlap 584956 ACTGGCTCAGAAAAA CAGGTG TCTT CACCGG CTGAAATTCTCGAAT Ctha_0497 584231 - 586399 + | ABC-type branched-chain amino acid transport systems periplasmic component-like protein TERM 826 587322 - 587352 + G 74 -8.3 -3.96327 | gap 1, overlap 587318 ATCGCGTGGCAGGCC GCCGATGCGTCGGG CTTG CTCGG-GTATCGGC TTTATGCTACCCCGT TERM 827 587416 - 587386 - g 77 -3.3 -5.26316 | gap 1 GCAGCGGAGAAAAAA CCTTGATTG-CCGA AATG TCGGGCAGCCAAAG AACTTACGAATGGAC TERM 828 587431 - 587457 + G 71 -10 -3.18467 | opp_overlap 587431 GAACTTACGAATGGA CTGTGCCGGAGG ACA TCACCGGCGCGG TTCGCTTGAGCATTT Ctha_0498 586746 - 588824 + | hypothetical protein TERM 829 588886 - 588909 + T 100 -8.1 -6.06723 | opp_overlap 588886, overlap 588887 AGATTCCAAACAGTA GGGGCGAAC TTGTAT GTTCGCCCA TTTTTTTTTCCAAAA TERM 830 588887 - 588908 + T 93 -11.6 -4.22949 | opp_overlap 588886, overlap 588886 GATTCCAAACAGTAG GGGCGAAC TTGTAT GTTCGCCC ATTTTTTTTTCCAAA TERM 831 588956 - 588928 - T 100 -8.1 -5.40072 | TTTTTTCCAAAAAAA GAAAGCGCTCCTA ACT TTGAAGCGCCTCC CATTTTTGCAGGTAT Ctha_0499 589747 - 588938 - | hypothetical protein TERM 832 589122 - 589137 + g 80 -5.4 -5.055 | overlap 589114 GTGAGCGCGTCGCAT TCGTTG TAAG CGACGA TTTTTTCGAGCTTGC TERM 833 590571 - 590581 + G 74 -8.2 -3.87373 | opp_overlap 590571, overlap 590576 TTATGTGCGCAACGA CGCC GAC GGCG TTTATCGCCGCTATC TERM 834 592043 - 592009 - g 72 -5.7 -4.48175 | gap 1 AAAAGCGAAGGAAAA CCGGAGCTTTACGCCA GAAT TGGCATTAA-CACCGG ACAAGTGATCGTTGG Ctha_0500 589999 - 592359 + | adenylate/guanylate cyclase with Chase sensor Ctha_0501 592475 - 593041 + | methionine-R-sulfoxide reductase TERM 835 593183 - 593145 - T 74 -6.2 -4.55887 | gap 1, opp_overlap 593146, overlap 593146 GCCGAAAAATAGAAA TGCAACCAAACTGCATA AGAAAA CAT-CAGTTTGGTTGCT TGTTGAAAACCGATT TERM 836 593146 - 593182 + T 74 -9 -3.61517 | gap 1, opp_overlap 593145 593146 CCGAAAAATAGAAAT GCAACCAAACTGCAT AAGAAAAC AT-CAGTTTGGTTGC TTGTTGAAAACCGAT TERM 837 593182 - 593146 - T 78 -9.7 -3.32448 | gap 1, opp_overlap 593146, overlap 593145 CCGAAAAATAGAAAT GCAACCAAACTGCATA AGAAAA CAT-CAGTTTGGTTGC TTGTTGAAAACCGAT Ctha_0502 594446 - 593217 - | protein of unknown function DUF214 TERM 838 594380 - 594400 + g 81 -8.4 -4.54047 | ATGTTAGCAAGCTGC GCATTTTG TTTTT CAAAATGC TTTTGTATGCCGTCC Ctha_0503 595178 - 594456 - | ABC transporter-related protein TERM 839 594723 - 594701 - G 70 -9 -3.37796 | opp_overlap 594701 CCGGATCATTGACAA GCGCACGGGC AAT GGCCACGCGC TGCTGCTGTCCGCCA TERM 840 595347 - 595329 - R 85 -10.2 -4.07687 | ATTTCGGCTTTAAAA TGGCGGAG GGC CGCCGCCA AAACCGCTTTTTCTA Ctha_0504 596597 - 595323 - | efflux transporter, RND family, MFP subunit TERM 841 597165 - 597188 + G 80 -6.1 -4.91109 | gap 1, opp_overlap 597149 597168, overlap 597168 CTTTACCATTACGAT GAA-GCCTTG ATTCG CAAGGCGTTC TTTTTATGCTACCGG TERM 842 597216 - 597242 + G 83 -6.5 -5.01732 | opp_overlap 597216 597221 CGGGCGCACAGCGAA GAAAAGCGCGC GTCAG GCGAGCCTTTC TTTTTTCACCCCGTT TERM 843 597237 - 597221 - g 72 -5 -4.70169 | opp_overlap 597216, overlap 597216 GCACAGCGAAGAAAA GCGCGC GTCAG GCGAGC CTTTCTTTTTTCACC TERM 844 598653 - 598624 - g 78 -5.7 -4.82678 | gap 1, opp_overlap 598630, overlap 598618 598628 TGACAAAAACGAAAA GCATTATCGCCCTC ACC GAGCGCGATT-TGC TAAAAGCGATCAAAG TERM 845 598630 - 598648 + G 76 -8.8 -3.72695 | opp_overlap 598618 598628 598624 AAACGAAAAGCATTA TCGCCCTC ACC GAGCGCGA TTTGCTAAAAGCGAT TERM 846 598901 - 598869 - g 73 -2 -5.25976 | gap 1, opp_overlap 598872, overlap 598882 AACCAAAAAAACAAA GATGCC-GTCAGA ATCGAAGG CCTGCCAGGCATC GCCTTCGAGTATGCG TERM 847 598909 - 598882 - g 70 -9.2 -3.30007 | gap 1, opp_overlap 598872, overlap 598869 AAGATGCCGTCAGAA TCGAAGGC-CTGC CAG GCATCGCCTTCGA GTATGCGCGCTGTTG TERM 848 599079 - 599097 + G 72 -9 -3.61715 | GACAACAACGGGCAG TTTTTAGC TGG GCTAAAAA TTCTTGGCGAGGATG Ctha_0505 597081 - 599315 + | (p)ppGpp synthetase I, SpoT/RelA Ctha_0506 600399 - 599326 - | Helix-hairpin-helix DNA-binding class 1 Ctha_0507 600681 - 601769 + | glycine cleavage system T protein TERM 849 602065 - 602053 - g 78 -4.9 -5.055 | opp_overlap 602053 GCAACGGCCAAAAAA TTGAA GGC TTCAA TCTTGACAATTCTCC TERM 850 602276 - 602290 + G 73 -4.2 -4.74103 | GGCCATTATTTGTGC CGGC AAAAGCA GCCG TTTTTCACTTGAGGA Ctha_0508 601824 - 602600 + | 2-phosphosulfolactate phosphatase TERM 851 603477 - 603463 - g 78 -5.6 -4.89521 | overlap 603464 ACAGGCCAAACAAAA CGCGTC CCA GACGCC AAACGAATCCTTGCC TERM 852 603476 - 603464 - g 72 -9.1 -3.52628 | overlap 603463 CAGGCCAAACAAAAC GCGTC CCA GACGC CAAACGAATCCTTGC TERM 853 603811 - 603797 - g 88 -3.4 -5.71295 | overlap 603798 ACACAAAAAGAAAAA GCAGGG CAA CCCGAC GATTCTCATTTGAGA TERM 854 603949 - 603933 - g 86 -3 -5.63517 | gap 1, opp_overlap 603937 603940, overlap 603937 CGCCCAAAGAAAAAA CGA-TGC CCTC GCAGTCG GGCTTTTCGAAAGAG TERM 855 604669 - 604646 - g 78 -6 -4.87892 | CTTGAAGAAAACAAA GCCAAGCTTC TCGA AAAGCTTCGC ATCTACAAAATTGAA TERM 856 604856 - 604846 - g 100 -8.2 -5.15634 | GATTCCAGGAAAAAA CGCC GTC GGCG TGGAGATTCCGAACA Ctha_0509 602696 - 606022 + | cell divisionFtsK/SpoIIIE TERM 857 606096 - 606070 - T 100 -11.7 -5.4505 | gap 1, opp_overlap 606075, overlap 606050 606073 TTTGGGAATAAAAAA GAAGACTCCAGC AAAG GCTGGAGTCT-C ATGCAACAAGCAATA TERM 858 606094 - 606073 - T 100 -14.5 -4.81306 | opp_overlap 606075, overlap 606070 GGGAATAAAAAAGAA GACTCCAGC AAAG GCTGGAGTC TCATGCAACAAGCAA TERM 859 606075 - 606092 + T 78 -11.3 -2.78384 | opp_overlap 606073 606070 GAATAAAAAAGAAGA CTCCAGC AAAG GCTGGAG TCTCATGCAACAAGC Ctha_0510 607418 - 606165 - | acetate kinase TERM 860 606272 - 606289 + g 72 -4.7 -4.68209 | opp_overlap 606269, overlap 606275 606275 CAGGGGAAATACGCC CTTCGCG CCCA CGCGTGG TTTGTTTATTCAAAT Ctha_0511 607472 - 608698 + | glycosyl transferase family 2 Ctha_0512 609038 - 608754 - | hypothetical protein Ctha_0513 610676 - 609252 - | alpha amylase catalytic region TERM 861 610360 - 610377 + g 73 -2.1 -5.10029 | gap 1, opp_overlap 610360, overlap 610363 GAAATCTTTCGAAAA TCGCTTAT CGC ATAAG-GA TTTTTTGCCATTGAT TERM 862 610645 - 610628 - G 95 -2.7 -6.02345 | overlap 610631 CAATCACAAAAAAAA TACTTGC AAAG GCAATTA GGGAAACAATAGTTA Ctha_0514 610769 - 612097 + | Three-deoxy-D-manno-octulosonic-acid transferase domain protein Ctha_0515 612094 - 612657 + | hypothetical protein TERM 863 612843 - 612857 + G 74 -5.6 -4.58395 | CAGCATAGTTTATAT CGCAGC TTG GATGCG TTTTTAGAACCTGGC TERM 864 613449 - 613437 - g 76 -4.8 -4.7416 | overlap 613428 GCAAAAGCCGAAAAA CGAC GGGTT GTCG CGCTGGGAACAACGG TERM 865 613523 - 613539 + G 83 -4.3 -5.38054 | CGAGCCCGCCGAACT TGCTGGC GAA GCCGACA TTTTTATTTATCCAG TERM 866 613678 - 613662 - g 83 -10.1 -4.1899 | GCAGCGCATCTAAAA GCGGCCT ACG AAGCCGC CCTGCAAAACGACTA Ctha_0516 612714 - 613733 + | S-adenosylmethionine/tRNA-ribosyltransferase-isomerase Ctha_0517 613948 - 614946 + | tryptophanyl-tRNA synthetase TERM 867 614979 - 614959 - f 83 -7.5 -4.58724 | TAAACACAACCAAAA GGCGTTCCA TTT TAGAGCGCC ACGCTTGCATAAGGA TERM 868 615056 - 615040 - g 86 -4.5 -5.46657 | CATTGCAAGAAAAAA TCATTTA ACC CAAATGA AAAACATGAACCGGA TERM 869 615081 - 615095 + G 79 -2.1 -5.48213 | ACCGGATTTACACCG CGATT TTATC AGTCG TTTTTCTTTTCAGTG TERM 870 615572 - 615595 + G 72 -3 -5.00616 | opp_overlap 615570, overlap 615574 TACGATTACGACACC GACGGCGATC CGCA GATTTCCGCC TTTTTTGACCCGGCC Ctha_0518 614999 - 616021 + | hypothetical protein Ctha_0519 616031 - 616711 + | beta-phosphoglucomutase family hydrolase TERM 871 617027 - 617007 - g 72 -5.3 -4.59853 | overlap 617019 TGAATTGCGGAAAAA TCCGCGTCA AAT TGCCGCCGA CATCATCTCGAACCT TERM 872 617069 - 617096 + G 82 -2.7 -5.61881 | overlap 617076 AATCGGTGGATAAAA TTGATGTGGCC GGCGCG GGCTTTATCAA TTTTTATTTTTCAAA TERM 873 617646 - 617636 - g 74 -6.8 -4.28049 | overlap 617637 GGGAAAACGGCAAAA GTCG CAA CGAC GAGGTCGTGGAACGC TERM 874 618027 - 618045 + G 82 -5.8 -5.16071 | overlap 618029 TTTAATTGACGATGT CGGCGCGG ACG CCACGCGG TTTTTCTTCATCATT Ctha_0520 616846 - 618504 + | arginyl-tRNA synthetase TERM 875 618565 - 618596 + F 85 -11.6 -3.40066 | opp_overlap 618561 618576 618581 618582 AACCCTCAGAATGTG GCCTTCAGCAACAG AATC CTTCTGCTGAAGGC TTAACTTATTTTGTT TERM 876 619076 - 619100 + G 72 -8.5 -3.81256 | opp_overlap 619075 619076 CCACGCGTTAGAAAG TGCGGCGCTGA AGC TCAACGGCGCA TTGGTTTTTGAGCAT TERM 877 619100 - 619076 - g 72 -10.7 -2.91924 | opp_overlap 619076, overlap 619075 CCACGCGTTAGAAAG TGCGGCGCTGA AGC TCAACGGCGCA TTGGTTTTTGAGCAT Ctha_0521 618699 - 620111 + | metal dependent phosphohydrolase Ctha_0522 620162 - 620506 + | hypothetical protein TERM 878 620553 - 620563 + G 85 -6.8 -5.07053 | opp_overlap 620551 620553, overlap 620559 CAAGGAGAAAAATGA GCAC GCC GTGC TTTTTTGGCATGCTT TERM 879 620628 - 620616 - g 70 -9.1 -3.41795 | overlap 620614 620612 GGAAAAGCAAATAGA CGCTG TTA CAGCG GCTGGCTATCCGGCC Ctha_0523 620512 - 621294 + | alpha/beta hydrolase fold TERM 880 621331 - 621301 - T 100 -14.1 -4.41494 | opp_overlap 621304 GATGGCTAATCAAAA CTCCCTGAAGGAG ACAGG CTTCTTCAGGGAG AAATCGCACGCAACT Ctha_0524 622197 - 621376 - | short-chain dehydrogenase/reductase SDR TERM 881 622113 - 622123 + g 80 -5.4 -5.05782 | CCACTTTTGCACCTT GTTC AAT GAAC TTTTTTGCAATCGAT TERM 882 622302 - 622254 - R 90 -9.2 -4.82901 | gap 2, opp_overlap 622261, overlap 622258 622261 TGGTTTTCATAAAAA GTAAGAAGGAAGCACAATTGCATC GTT GATG-AATTG-GCTTCCTTCTTGA AGTTAACTTATCCGA TERM 883 622298 - 622258 - R 100 -14.4 -3.88001 | gap 2, opp_overlap 622261, overlap 622254 622261 TTTCATAAAAAGTAA GAAGGAAGCACAATTGCATC GTT GATG-AATTG-GCTTCCTTC TTGAAGTTAACTTAT TERM 884 622261 - 622295 + r 81 -10.3 -3.6849 | gap 2, opp_overlap 622261 622258 622254 CATAAAAAGTAAGAA GGAAGCACAATTGCATC GTT GATG-AATTG-GCTTCC TTCTTGAAGTTAACT TERM 885 622295 - 622261 - R 85 -10.3 -4.0498 | gap 2, opp_overlap 622261, overlap 622258 622254 CATAAAAAGTAAGAA GGAAGCACAATTGCATC GTT GATG-AATTG-GCTTCC TTCTTGAAGTTAACT Ctha_0525 624884 - 622341 - | Nucleotidyl transferase TERM 886 622480 - 622466 - G 74 -5.6 -4.67038 | overlap 622467 CTGGCAAAAGTAAAA GCGACG TGT CGTCGT CATAAATCACTTTAA TERM 887 622479 - 622467 - G 70 -9.1 -3.395 | overlap 622466 TGGCAAAAGTAAAAG CGACG TGT CGTCG TCATAAATCACTTTA TERM 888 622772 - 622750 - G 71 -7 -4.07568 | overlap 622729 622755 GTGCCGCCGGCAAAA GCAATTTCCG AGT CGGAAGTTAC CGCGCGCATCATATC TERM 889 622925 - 622938 + g 72 -6.7 -4.3739 | overlap 622936 622937 GTCGAGTGACGATGG TCAGC AAGC GCTGA TTTTCTAAGAAAGTC TERM 890 623810 - 623822 + g 73 -7.7 -4.05033 | GAATATTAGCCTCTT TGCCA ATT TGGCA TTTATCTGCAATGAA TERM 891 624083 - 624115 + g 81 -5 -5.19212 | gap 1 AATTCAAATCCACTT TTGCAGATTTATGTG CATA CACATCG-TCTGCAA TTTTTTCATAATCGT TERM 892 624834 - 624849 + g 70 -9 -3.46511 | TGTTCCAAAACCTCC GGCCAT AATA ATGGCC TTCTCAATTGTATAA TERM 893 625666 - 625654 - g 72 -6.3 -4.23732 | CAAACAGAAATTAAA GCAAA AAC TTTGC GCCCACTTGATGAGA Ctha_0526 625118 - 625735 + | regulatory protein RecX TERM 894 625766 - 625797 + T 80 -8 -4.36914 | opp_overlap 625769, overlap 625767 625769 CTGACTTAAACAGAA AAAGCGGTTGAGCA AAAC TGCTTAACCGCTGA TTTTCTAAGAGACCA TERM 895 625767 - 625796 + T 84 -11.5 -3.21934 | opp_overlap 625769, overlap 625766 625769 TGACTTAAACAGAAA AAGCGGTTGAGCA AAAC TGCTTAACCGCTG ATTTTCTAAGAGACC TERM 896 625769 - 625794 + T 95 -14.1 -3.1733 | opp_overlap 625769, overlap 625767 625766 ACTTAAACAGAAAAA GCGGTTGAGCA AAAC TGCTTAACCGC TGATTTTCTAAGAGA TERM 897 625794 - 625769 - T 100 -11.9 -5.20783 | opp_overlap 625769 625767 625766 ACTTAAACAGAAAAA GCGGTTGAGCA AAAC TGCTTAACCGC TGATTTTCTAAGAGA Ctha_0527 626634 - 625924 - | uridylate kinase TERM 898 626729 - 626712 - R 100 -11.3 -6.13503 | CATCAACAAAAAAAA GGCCTCT TAAA AGAGGCC AAAATAAAAATAGTT Ctha_0528 627612 - 626743 - | translation elongation factor Ts Ctha_0529 628394 - 627642 - | ribosomal protein S2 TERM 899 627978 - 627996 + g 76 -8.8 -3.73445 | CAGCTTTTCTTTTTC GCGCATCA ACA TGAGGCGC TCTTTCTTGGTAATC Ctha_0530 628906 - 628514 - | ribosomal protein S9 TERM 900 628764 - 628781 + g 76 -8.5 -4.08394 | overlap 628747 ATAAGTGGTCTTACT GCGTTAT CGCT ATAACGC TTTTCCGCAAAATAT Ctha_0531 629387 - 628935 - | ribosomal protein L13 TERM 901 629867 - 629857 - g 76 -8.2 -4.0251 | opp_overlap 629864 ATTATCACAATTAAA CCGC TGG GCGG TGGCGTTATCGCTGA Ctha_0532 629653 - 630681 + | cell shape determining protein, MreB/Mrl family Ctha_0533 632316 - 631177 - | glycosyl transferase group 1 Ctha_0534 633786 - 632383 - | hypothetical protein TERM 902 633038 - 633025 - G 78 -6.7 -4.56597 | opp_overlap 633025 GCGCTTGTTTAAAAA TAGCC ATGC GGCTA TTTGAATAAAACCAG TERM 903 633524 - 633513 - G 73 -2.2 -5.09426 | overlap 633516 TCCAAGTTGAAAAAA CGAT CATT ACCG TTATCAACGGCATAG TERM 904 633779 - 633762 - G 75 -2.8 -5.19251 | CAACACCAATAAAAA CAATTA CAAAAT TAATTG GATCCATCGTTACTT Ctha_0535 634799 - 633789 - | glycosyl transferase group 1 Ctha_0536 635996 - 635061 - | glycosyl transferase group 1 TERM 905 635867 - 635845 - G 100 -9.8 -5.00616 | opp_overlap 635847, overlap 635847 GCTTTTCTTAAAAAA CACAGCCCCA CGA TGGGGCCGTT AATCATTGCATAAAT TERM 906 635847 - 635865 + g 74 -10.2 -3.2827 | opp_overlap 635847 635845 TTTTCTTAAAAAACA CAGCCCCA CGA TGGGGCCG TTAATCATTGCATAA TERM 907 635865 - 635847 - G 95 -12.4 -4.13561 | opp_overlap 635847, overlap 635845 TTTTCTTAAAAAACA CAGCCCCA CGA TGGGGCCG TTAATCATTGCATAA Ctha_0537 636922 - 636164 - | Triose-phosphate isomerase Ctha_0538 637159 - 636938 - | hypothetical protein Ctha_0539 637640 - 637164 - | transcription elongation factor GreA TERM 908 637739 - 637713 - H 76 -3.7 -5.32396 | ACATTAAAAATAAAA GCCAGCCCT TTTCCTATT AGAGCTGAC TTATCCATTTGATTG TERM 909 637959 - 637920 - g 73 -7.7 -4.14739 | CCACGGATTTGAAAA CGGCGCGCCGATTCCAC CGCAAT ACGCATTCTGCGCGCCG GCCAGTCAAGGCATT TERM 910 638002 - 637992 - g 72 -3.2 -5.00616 | opp_overlap 637999, overlap 637999 TTCTCTGGCAAAAAA CAGA AAT CCTG CGCTTAGCTGGTCTG Ctha_0540 637891 - 638520 + | PEBP family protein TERM 911 638533 - 638564 + F 93 -11 -5.13741 | gap 1, overlap 638536 TAAAATCACCTGCAG CGTGTAGAGGCAAAA GTG TGTTGCCTCTAC-CG TTTTTCTTGCATTCC TERM 912 638536 - 638562 + F 86 -12.4 -2.79212 | overlap 638533 AATCACCTGCAGCGT GTAGAGGCAAAA GTG TGTTGCCTCTAC CGTTTTTCTTGCATT Ctha_0541 638728 - 639612 + | 5,10-methylenetetrahydrofolate reductase TERM 913 639645 - 639668 + F 100 -8.3 -5.63517 | opp_overlap 639645 TCCATTTCTAAAAAA CCTTCTTAT CTGTTT ATAAGAAGG TTTTTTCTTTCCACC TERM 914 639668 - 639645 - f 91 -8.3 -5.03314 | opp_overlap 639645 TCCATTTCTAAAAAA CCTTCTTAT CTGTTT ATAAGAAGG TTTTTTCTTTCCACC Ctha_0542 640070 - 641530 + | alpha amylase catalytic region TERM 915 641561 - 641590 + F 83 -6.4 -5.10933 | opp_overlap 641560 641562, overlap 641562 AAATATTTAAAAATT ACCGGCGCAA AACGATGACA TTGCGCCGGA TTTTCTTTTAAATCC TERM 916 641562 - 641589 + F 80 -9.9 -3.65475 | opp_overlap 641560 641562, overlap 641561 AATATTTAAAAATTA CCGGCGCAA AACGATGACA TTGCGCCGG ATTTTCTTTTAAATC TERM 917 641589 - 641562 - f 78 -9.9 -3.28079 | opp_overlap 641562 641561, overlap 641560 AATATTTAAAAATTA CCGGCGCAA AACGATGACA TTGCGCCGG ATTTTCTTTTAAATC Ctha_0543 641725 - 642555 + | orotidine 5'-phosphate decarboxylase Ctha_0544 642697 - 644529 + | glucosamine/fructose-6-phosphate aminotransferase, isomerizing TERM 918 644594 - 644576 - f 73 -4.5 -5.01546 | opp_overlap 644568 644576, overlap 644568 AAATTTATAGAAAAA GGCTGTT GAAAA AGCAGCC TTTTTTCATTGCATC TERM 919 644576 - 644594 + F 88 -6.7 -5.28481 | opp_overlap 644576 644568, overlap 644568 AAATTTATAGAAAAA GGCTGTT GAAAA AGCAGCC TTTTTTCATTGCATC TERM 920 645271 - 645250 - g 73 -4.3 -4.82901 | opp_overlap 645250 CTTGCTGCAGAAAAA CGCCGAGCA AATA TATCCGGCG TGTTTCAAATCCGTC Ctha_0545 644716 - 645426 + | competence protein Ctha_0546 645929 - 645543 - | hypothetical protein Ctha_0547 646679 - 647500 + | response regulator receiver protein TERM 921 647763 - 647743 - g 70 -2.5 -5.06414 | GTTTTGGAAGAAAAA CGATCGAAA TCT TATCAACCG GTCATTTCTTGCAAG Ctha_0548 647541 - 647930 + | Roadblock/LC7 family protein Ctha_0549 647954 - 648655 + | hypothetical protein Ctha_0550 648655 - 649191 + | small GTP-binding protein TERM 922 649282 - 649233 - T 88 -11.2 -4.26305 | gap 2, opp_overlap 649249, overlap 649234 649249 AAAACTGAATATAAA CTGCTTGA--TAAAAAAAGCCGGT ATAA ACCGGCTTTTTTTATTTCAAACAA GAAATGAGGTGCTAC TERM 923 649281 - 649234 - T 91 -12.5 -3.14156 | gap 2, opp_overlap 649249, overlap 649233 649249 AAACTGAATATAAAC TGCTTGA--TAAAAAAAGCCGGT ATAA ACCGGCTTTTTTTATTTCAAACA AGAAATGAGGTGCTA TERM 924 649249 - 649264 + T 100 -10.4 -5.95539 | opp_overlap 649234 649233 649249 TGCTTGATAAAAAAA GCCGGT ATAA ACCGGC TTTTTTTATTTCAAA TERM 925 649264 - 649249 - T 100 -10.4 -5.60993 | opp_overlap 649249, overlap 649234 649233 TGCTTGATAAAAAAA GCCGGT ATAA ACCGGC TTTTTTTATTTCAAA Ctha_0551 649650 - 649294 - | ferredoxin-like protein TERM 926 650557 - 650547 - g 74 -6.8 -4.21275 | opp_overlap 650546, overlap 650540 650536 CCAAGCGACGGAAAA TCCG CAA CGGA ATCGCTTACCCTTTT TERM 927 650975 - 650990 + G 89 -5.4 -5.72622 | CCTGCCAGTTGTGGC TTGGTG CGGT CGCCAA TTTTTTATTTCTGCA TERM 928 651250 - 651237 - g 72 -3.1 -5.03145 | gap 1 GAAGCCGTTAAAAAA CTG-GC TAA GCTCAG TGCAAAAACCGCGCG TERM 929 651397 - 651370 - g 89 -9.2 -4.67353 | gap 1, opp_overlap 651374 651377 CGACGGATGGAAAAA TCATCGACGG-CG CAT CGTCCGTTGATGA ATCCATGATGACTGG Ctha_0552 650166 - 652811 + | heavy metal translocating P-type ATPase Ctha_0553 652852 - 653235 + | CrcB protein Ctha_0554 653249 - 653605 + | protein of unknown function DUF190 TERM 930 654452 - 654441 - g 70 -2.2 -5.02074 | gap 1 TTACCCGCTAAAAAA GAGCG CGT CGC-C AATCCGTTTCCATCA TERM 931 654560 - 654548 - g 76 -7.7 -4.32177 | TGAGCCGATAAGAAA CCCTT TTG AAGGG AACAAGTCACCGCAA Ctha_0555 653976 - 654611 + | NusB antitermination factor Ctha_0556 654616 - 655320 + | metallophosphoesterase Ctha_0557 655350 - 655991 + | endonuclease III Ctha_0558 656264 - 656761 + | protein of unknown function DUF520 TERM 932 656967 - 656984 + G 81 -3.3 -5.28942 | opp_overlap 656957 AGAACGAAGCGTGTT GGGCTTC TGGC GATGCTC TTTTTCTTTACACTA Ctha_0559 656931 - 658850 + | glycoside hydrolase family 3 domain protein TERM 933 658885 - 658901 + T 71 -4.5 -4.74103 | opp_overlap 658883, overlap 658883 AAATGGGGGGAAAGC TTGTTTT CAA AAAGCAA TTTTTAAGTTAAAAA Ctha_0560 659751 - 658921 - | MazG family protein TERM 934 659504 - 659484 - G 72 -4.7 -4.64861 | opp_overlap 659484 GCGCCTGAAAACAAA TGTGCAATA AAA TATCGCCCA GTTCTTTTTTCATCT Ctha_0561 660366 - 659764 - | protein of unknown function DUF820 Ctha_0562 661723 - 660440 - | seryl-tRNA synthetase Ctha_0563 662349 - 661750 - | GCN5-related N-acetyltransferase TERM 935 662392 - 662360 - R 82 -4.9 -5.35224 | gap 1, opp_overlap 662388, overlap 662361 662388 GTCATAAAAATAAAA TTCCGTG-CTGCCA GTTAAT TGGCAAACACGGAT GAATCACATCAGATT TERM 936 662391 - 662361 - R 75 -8.4 -3.79508 | gap 1, opp_overlap 662388, overlap 662360 662388 TCATAAAAATAAAAT TCCGTG-CTGCCA GTTAAT TGGCAAACACGGA TGAATCACATCAGAT TERM 937 662531 - 662502 - R 81 -11.4 -2.72049 | opp_overlap 662501 662498 662527, overlap 662515 TATATCGTGCAAGTA GCGGGGGCAGAC ACGTAG GTCTGCCCCTAC ATCGGTTGTCGGCTT Ctha_0564 663044 - 662589 - | hypothetical protein TERM 938 662962 - 662990 + g 90 -10.4 -4.23781 | gap 1, opp_overlap 662969, overlap 662969 AGCGCCGCGCGAATT GAGCGAA-CCGCA TTGA TGCGGTTTTGCTC TTTGCTTTTCATCGC TERM 939 662969 - 662982 + g 81 -8.1 -4.52266 | opp_overlap 662969, overlap 662962 CGCGAATTGAGCGAA CCGCA TTGA TGCGG TTTTGCTCTTTGCTT TERM 940 663454 - 663418 - R 78 -10.8 -2.7186 | gap 1, opp_overlap 663444, overlap 663424 663425 AAATCTTCTCAATCA GGCAAACGGCGTGGGCG AGCG CGCCTTCGCC-TCTGCC AACATAGCCGATTTT TERM 941 663448 - 663425 - R 72 -9.4 -2.82595 | opp_overlap 663444, overlap 663424 663418 CTCAATCAGGCAAAC GGCGTGGGCG AGCG CGCCTTCGCC TCTGCCAACATAGCC Ctha_0565 663874 - 663401 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 942 663444 - 663465 + g 79 -2.9 -5.30155 | opp_overlap 663425 663424 663418 TGGGCGAGCGCGCCT TCGCCTCTG CCAA CATAGCCGA TTTTTTCGTTGGTCG Ctha_0566 664317 - 663961 - | hypothetical protein Ctha_0567 665044 - 664361 - | ABC transporter-related protein Ctha_0568 666070 - 665060 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 943 665345 - 665327 - G 74 -3.8 -5.00616 | overlap 665328 CGCTGTTCCAAAAAA TCCATCTG ATG CAAATGGC CCTTCAACACGGTAA Ctha_0569 666556 - 666074 - | hypothetical protein TERM 944 666767 - 666787 + r 79 -9 -4.18401 | CTATTTCTAAATTTT TCGGGTGC TTTTC GCACTCGA TTTTGCAGTCTATAA Ctha_0570 668042 - 666927 - | DegT/DnrJ/EryC1/StrS aminotransferase TERM 945 667510 - 667500 - G 73 -2.4 -5.14563 | opp_overlap 667500 TTTCGCAGGAAAAAA GCTC GTT GCGC TTGCATGACCAAAAG Ctha_0571 669344 - 668091 - | hypothetical protein TERM 946 668957 - 668975 + g 70 -9.5 -3.02511 | opp_overlap 668956 CTTCCGCGACCAGAT GCGCCGT GTAGG GCGGCGC TGTTGAGAAAATGAC TERM 947 669700 - 669712 + H 73 -2.7 -5.29846 | TATGAAACGGTTAGG TTTCT ACC AGGAA TTTTTATTTCAAGTT Ctha_0572 669744 - 670583 + | 2-dehydro-3-deoxyphosphooctonate aldolase Ctha_0573 670602 - 671153 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family Ctha_0574 671263 - 671682 + | hypothetical protein TERM 948 671904 - 671925 + G 73 -7.9 -4.07568 | gap 1, opp_overlap 671904 TTTTTCGATATTCAA GGCCATCGCG GCG CGCGC-GGCC TTTTGCCCGAAAACA TERM 949 671925 - 671904 - g 71 -10.1 -3.12351 | gap 1, opp_overlap 671904 TTTTTCGATATTCAA GGCCATCGCG GCG CGCG-CGGCC TTTTGCCCGAAAACA Ctha_0575 671763 - 672710 + | glycerophosphoryl diester phosphodiesterase TERM 950 672939 - 672926 - g 72 -5.2 -4.58663 | overlap 672927 ACGAGTTCTCAAAAA GCGC ACCGTA GCGC GGCCACTACGAATAC Ctha_0576 672734 - 673315 + | rare lipoprotein A TERM 951 673526 - 673552 + T 100 -13.2 -6.17268 | opp_overlap 673526 GGAGCACAAAAAAAA GCCTGTAATTAA ATT TTAGTTACAGGC TTTTTTTTATTCTCA TERM 952 673552 - 673526 - T 100 -11 -5.9873 | opp_overlap 673526 GGAGCACAAAAAAAA GCCTGTAATTAA ATT TTAGTTACAGGC TTTTTTTTATTCTCA Ctha_0577 674839 - 673697 - | glycosyl transferase family 2 TERM 953 673840 - 673820 - G 80 -6.8 -4.57341 | overlap 673824 AAGTCCGTGCAAAAA CGACTCGC CAATC GAGAGTCG ATAACGAACCGCTAT TERM 954 674414 - 674402 - G 79 -10.5 -3.53012 | opp_overlap 674392 674381 GCGGCTCTGCTGAAA CGCGG CAA CCGCG CGGCGCAGACTTTCA TERM 955 674479 - 674461 - G 79 -8.8 -4.07885 | opp_overlap 674460 674465 CAGCGTCTGTGAAAA GCAGCAGG CTG CCTGTTGC CTGGCGCGAAAGCTG TERM 956 674553 - 674567 + g 72 -2.9 -5.03314 | GAGCCGTGGAGCACT TTCAA CTTAT TTGAA TTTTTTGCCAGTGCC TERM 957 674789 - 674773 - G 88 -8.1 -4.8048 | GCTCCACATCAAAAA GATTCTT GAT AAGAATC CCCAAAAAAACGAGT TERM 958 674886 - 674862 - R 100 -10.8 -5.38047 | CATCGATATAAAAAA GGCTTACTCC ACAAG AGAGTAAGCC TTGAAATATTAAAAT Ctha_0578 676142 - 674925 - | arsenite-activated ATPase ArsA TERM 959 675590 - 675564 - G 72 -6.7 -4.37092 | ATCGGTTGCAGAAAA GAGGTTTTCAA CGGCT TCAAAAACCTC GGAAGGAGCAACCAT Ctha_0579 676913 - 676293 - | molybdenum cofactor synthesis domain protein TERM 960 676365 - 676376 + g 80 -5.8 -5.01732 | GCTTCCTGCGTTTCC CGTC CATT GACG TTTTTTCCGCGGCTT TERM 961 676841 - 676855 + g 70 -5 -4.44797 | AGTCACTGACGGTAA TAATGG CAA CCGTTA TTTTCCTGTTGATGC Ctha_0580 678023 - 677136 - | ATP phosphoribosyltransferase Ctha_0581 678895 - 678092 - | metallophosphoesterase TERM 962 678213 - 678199 - G 80 -7.1 -4.72272 | opp_overlap 678199 CCGTGCCATCAAAAA CGCCA TAAGT TGGCG TTTCATCGATCCAAG TERM 963 678995 - 678957 - R 91 -9 -5.0925 | gap 1 TGCTAAAACGAAAAA CGGCCACGACCACATTA TGCAAC TAACG-GATCGTGACCG AAAACTGAAAAGTAG Ctha_0582 680069 - 679053 - | bacteriochlorophyll/chlorophyll synthetase TERM 964 679994 - 680006 + g 76 -7.7 -4.29391 | opp_overlap 679994 TTACAGGATCAAGTA GCTCA ATA TGAGC TTTAATTTTGTCCTT TERM 965 680438 - 680415 - R 100 -8.9 -6.38039 | opp_overlap 680416 CATGCAAAAAAAAAA TGCCGCAAC GGCTTG ATTGCGGCA TCGAATTTTATAGCG TERM 966 680416 - 680426 + r 70 -8.2 -3.34344 | opp_overlap 680415 ATGCAAAAAAAAAAT GCCG CAA CGGC TTGATTGCGGCATCG Ctha_0583 681801 - 680446 - | RNA modification enzyme, MiaB family TERM 967 681710 - 681696 - G 72 -8.6 -3.70553 | opp_overlap 681695 GAATGGAAGAGATAA TTTCCG TAT CGGAAA AGTTCATTTGGCAGC Ctha_0584 683201 - 681975 - | protein of unknown function DUF214 TERM 968 683287 - 683267 - R 76 -4.7 -5.01811 | overlap 683261 GGAGCAAAGGAAAAA CGGCTCTTT CTG AAAAAGTCG CATTTCGCCGCCGCT Ctha_0585 684602 - 683352 - | protein of unknown function DUF214 TERM 969 683763 - 683774 + g 79 -4.4 -5.20534 | GATTGGATCAAGCGT GCTT TTGA AAGC TTTTTGTTCGTTGAT Ctha_0586 685455 - 684694 - | ABC transporter-related protein TERM 970 685035 - 685047 + g 72 -6.2 -4.20868 | overlap 685025 CCATAGCTTGCATGG CGCG CATTT CGCG TTCTTCTTTTGAAAC TERM 971 685675 - 685631 - R 78 -10.9 -2.70932 | opp_overlap 685637, overlap 685637 685658 TTTTGCGCCCAACCA TTCAAAGCTGGAATCTTTTTT TGA AAGGAAGATTCCAGCTTCGTA TGACTCGAAAACCGA TERM 972 685669 - 685637 - R 83 -10.7 -3.71527 | opp_overlap 685637, overlap 685631 685658 GCCCAACCATTCAAA GCTGGAATCTTTTTT TGA AAGGAAGATTCCAGC TTCGTATGACTCGAA TERM 973 685637 - 685669 + r 100 -15.1 -3.2794 | opp_overlap 685637 685631 685658 GCCCAACCATTCAAA GCTGGAATCTTTTTT TGA AAGGAAGATTCCAGC TTCGTATGACTCGAA TERM 974 685680 - 685701 + r 76 -7.4 -4.20024 | CCAGCTTCGTATGAC TCGAAAAC CGACCC GTTTTCGA TTTCGTGTTTTTTCT Ctha_0587 687159 - 685762 - | Phosphomannomutase TERM 975 686358 - 686336 - G 72 -3.2 -4.96848 | opp_overlap 686336 686338, overlap 686337 686338 TGTTTCAGATAAAAA TCCGCGCAGG CGA CCAGCGTGTA TTCCTCGCCGAAAAG TERM 976 686910 - 686930 + g 83 -13.3 -3.15574 | overlap 686903 686908 CAGCGATTTCGACGG TCGGTGTGG TCG CCACGCCGA TATTCATCACATTGC Ctha_0588 688127 - 687204 - | glycosyl transferase family 2 TERM 977 687526 - 687546 + g 71 -10.3 -2.73994 | overlap 687524 CTGTATCCGGTGGTG CCGGCGTGC CGC GCTTGCCGG TCGTATTCAAGAAAT TERM 978 687706 - 687734 + g 73 -2.4 -5.14965 | gap 1, opp_overlap 687707 687710, overlap 687707 GCGGTCATTCGAGAG AGGA-GGCGATAA AACA TTTTCGCCGTCCA TTTTTTCATAAAACT TERM 979 688404 - 688376 - R 73 -3.9 -5.03314 | gap 1, opp_overlap 688377 688378, overlap 688377 688378 TGGATTGTGAAAAAA CGGGCTGAAAAG GGGGAT CTTGTCAGCC-G TTTTACGAAAAATCA Ctha_0589 688833 - 688417 - | methylmalonyl-CoA epimerase TERM 980 688593 - 688614 + g 85 -7.3 -4.92363 | overlap 688594 CTGTTTCCAGCGCGA TGTGGTGAA GCCC TTCGCCACG TTTTTCTAAATATTT Ctha_0590 690248 - 688935 - | transcription termination factor Rho Ctha_0591 691912 - 690614 - | FolC bifunctional protein TERM 981 691505 - 691522 + g 77 -3.3 -5.18726 | overlap 691503 691507 GCCTATGCCAGTTTC GATGACG GAAA CGTCGAC TTTTTCTTCTGCAAA Ctha_0592 692540 - 691938 - | Holliday junction DNA helicase RuvA TERM 982 692002 - 692021 + g 82 -7.2 -4.85599 | gap 1 CCATCAGGCACTTCC GCAATAGCG GCT CGC-ATTGC TTTTTCTGCAATAGA TERM 983 692098 - 692110 + g 71 -3.3 -4.85653 | overlap 692090 692102 ACTTGCTGCTTATCG GAGCG AAA CGCTG TTTCTTTTATATCTA TERM 984 692102 - 692114 + g 78 -6.3 -4.7189 | overlap 692090 692098 GCTGCTTATCGGAGC GAAAC GCT GTTTC TTTTATATCTATTTT TERM 985 692626 - 692599 - R 79 -10.6 -3.23795 | overlap 692597 692596 692603 GGTAAAAAAGAAGCA GGAACTTGCCGC AAGA GAGACAAGTTCC AAAAAAAATTTAGGC Ctha_0593 692917 - 692636 - | ribosomal protein S20 TERM 986 692674 - 692686 + g 88 -3.4 -5.63517 | AACGGTTCACCAGCT TCGA TAATT TCGA TTTTTTATTTGAGGC TERM 987 694778 - 694795 + G 80 -7 -4.57073 | GAAGAAATCGGCCTC TCCGTC GACGAA GACGGA TTTTTGGCGAACATG TERM 988 694955 - 694944 - g 73 -2.2 -5.14563 | gap 1 CGCTTGAGCAAAAAA GC-CG AAT CGCGC GGGCGAAAAAAGCGG TERM 989 695034 - 695001 - g 72 -2.9 -5.00616 | TCGTCCTTGAAAAAA CCCCGTTTTATGCCG AAAG CGGCGGACAGCAGGG CGACAGCGGCGAGAT TERM 990 695239 - 695215 - g 83 -9.1 -4.21922 | CGACGCAAAAGTAAA CGCCGAAACGC GAG GCGCGACGGCG CGAAACCATACGGCG TERM 991 695326 - 695336 + G 72 -8.2 -3.71792 | opp_overlap 695312, overlap 695323 AGGCTCGCTTGTCGG GCCG GAG CGGC TTCGTTTTGACTTCA TERM 992 695453 - 695440 - g 84 -8.1 -4.60924 | opp_overlap 695439 GAAAGCTGTGAAAAA GCACG CCGA CGTGC CGTTTGAAGACGCCA Ctha_0595 693536 - 696199 + | alanyl-tRNA synthetase Ctha_0596 696976 - 696542 - | hypothetical protein TERM 993 696641 - 696651 + g 83 -2.4 -5.75945 | overlap 696639 CTCGTAAGTTTTATC GCCG ATG CGGA TTTTTTTTACCCCGT Ctha_0597 698226 - 697027 - | TPR repeat-containing protein TERM 994 697208 - 697221 + g 72 -5.2 -4.56775 | overlap 697220 CCGAAGTTTTTCTCA GCCG ATTTCA CGGC TTTTTCCAGGAGCGT TERM 995 697334 - 697347 + g 72 -5.2 -4.56775 | overlap 697346 CCGAAGTTTTTCTCA GCCG ATTTCA CGGC TTTTTCCAGGAGCGT TERM 996 697460 - 697473 + g 76 -5.2 -4.83169 | overlap 697472 CCGAAGTTTTTCTCA GCCG ATTTCA CGGC TTTTTCTAGGAGCGT Ctha_0598 700105 - 698408 - | hypothetical protein TERM 997 698463 - 698476 + g 72 -5.2 -4.56775 | overlap 698475 GCCGAGTTTTTCTCA GCCG ATTTCA CGGC TTTTTCCAGGAGCGT TERM 998 699897 - 699907 + g 70 -2.4 -5.0133 | TTCTCCGAAGCCACG CCGC GCA GCAG TTTTTTGAACAAATC TERM 999 700208 - 700241 + r 93 -10.3 -5.06816 | gap 1, opp_overlap 700191, overlap 700211 TGGCGAGCCATGCTC GG-CTGGGCAACCTGC TAA GAAGGTTGCCCATTCC TTTTTCTTAAACCGT TERM 1000 700211 - 700237 + r 100 -15.2 -3.9407 | opp_overlap 700191, overlap 700208 CGAGCCATGCTCGGC TGGGCAACCTGC TAA GAAGGTTGCCCA TTCCTTTTTCTTAAA Ctha_0599 701717 - 700248 - | cysteinyl-tRNA synthetase TERM 1001 700316 - 700347 + g 78 -6.6 -4.56775 | overlap 700307 700319 TGCCGGTTAAGCCAT CGCGGATTTTGTCG GCGG TGGCAAAATCCTTG TTTTTGCGAGCGGCT TERM 1002 700319 - 700344 + g 86 -9.1 -4.40561 | overlap 700307 700316 CGGTTAAGCCATCGC GGATTTTGTCG GCGG TGGCAAAATCC TTGTTTTTGCGAGCG TERM 1003 700525 - 700491 - G 83 -6.5 -5.02476 | gap 1 ATACGTTTCAAAAAA GGCTTT-GGCATTTTC GAGC GAAGTTGCCGAAAGCC CGTCCGCCGCCAACG TERM 1004 700757 - 700747 - G 74 -5.4 -4.62069 | GCCGCATCGGAAAAA TCCA GCG TGGA GCGATAGTGCGATTG TERM 1005 701806 - 701780 - R 91 -8.1 -5.15526 | opp_overlap 701785, overlap 701785 AGATAAAATCAAAAA CAAAAGCCGAA TACAC TTCGGCTTTTT TCATTTATGCGTGAC TERM 1006 701801 - 701785 - R 100 -8 -5.36689 | opp_overlap 701785, overlap 701780 AAATCAAAAACAAAA GCCGAA TACAC TTCGGC TTTTTTCATTTATGC TERM 1007 701785 - 701801 + r 100 -8 -5.42514 | opp_overlap 701785 701780 AAATCAAAAACAAAA GCCGAA TACAC TTCGGC TTTTTTCATTTATGC Ctha_0600 702854 - 701862 - | hypothetical protein Ctha_0601 703594 - 702968 - | hypothetical protein TERM 1008 703120 - 703161 + g 72 -8.9 -3.56099 | gap 1 TACTCAACTGCACAC GCGAAGCTCTCGGCATATTT TTG ACATATCTCGAGAGCTT-GC TTTGCACGACTTCTC Ctha_0602 704179 - 703991 - | hypothetical protein TERM 1009 704190 - 704202 + r 70 -6.2 -4.25283 | TTCATTTTTTCGGGA GGCC GAAAA GGCC TTTTCGTCCAACAGT Ctha_0603 705274 - 704240 - | NADH dehydrogenase (quinone) TERM 1010 705237 - 705214 - G 77 -3.8 -5.1485 | TAAGCAACACAAAAA GCACGACGCC CATC AACATCATGC GCCCGGGAAAGTCCA TERM 1011 705331 - 705349 + r 85 -9.6 -4.27316 | opp_overlap 705328 TTCAAAAAGTATGAT GCTGCAAG ATT TTTGCAGC TTTTGACTTCGCAAA Ctha_0604 705791 - 705384 - | hemerythrin-like metal-binding protein Ctha_0605 710909 - 706020 - | multi-sensor hybrid histidine kinase TERM 1012 707578 - 707588 + g 85 -5.4 -5.31275 | opp_overlap 707578 TCGCGAACGGTAAAA TGCA GCG TGCA TTTTTTATCATCGAA TERM 1013 709995 - 710011 + g 73 -2.1 -5.09426 | opp_overlap 709980 709998, overlap 709996 709998 GCCGGTAATAAAATT GAACGGC AAC GCCGTGA TTTTTTGCGGTTCGG TERM 1014 711116 - 711126 + G 83 -2.4 -5.72207 | ATCAATGGCTGAATG GGGC ATG GCCA TTTTTTTACTTTACC TERM 1015 711353 - 711372 + G 89 -4.8 -5.63374 | opp_overlap 711339, overlap 711355 GGCAAAAAAATTATC GAGCGCCG CCTA CGCCGCAC TTTTTTTGCTGTTGC TERM 1016 711729 - 711708 - g 71 -3.7 -4.86293 | overlap 711722 CAACAAAAACTAAAA GAAGCAAAA GCAA TTCGGCTTC TATAAGCCGTGCTAA Ctha_0606 711063 - 711734 + | hypothetical protein Ctha_0607 713507 - 711741 - | carboxyl-terminal protease TERM 1017 713049 - 713066 + g 72 -4.7 -4.57073 | opp_overlap 713045 713043 713042 CGAGATAATCACATC GCCGATG CGCA CGCCGGC TTTTTCAGCCGAATA TERM 1018 713751 - 713764 + H 71 -8.1 -3.53012 | TGAATTTGCTTGCCT GACGC GGCG GCGTC TTTAAGAAGCAACCG Ctha_0608 713897 - 714532 + | pyridoxamine 5'-phosphate oxidase TERM 1019 716928 - 716912 - g 78 -5.9 -4.75776 | AAGCGAAGGCAAAAA TAAAGGC GCA ACCTTTA CAGTGAAATTCAAAG Ctha_0609 714858 - 716972 + | histidine kinase Ctha_0610 717073 - 717474 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 1020 718388 - 718359 - g 73 -2.1 -5.252 | TACGGCGAGAAAAAA TTGGGCGATTTTT TTGC AGAACTCGCACAA AAAGCATAGTCGGCT Ctha_0611 717543 - 718397 + | NAD-dependent epimerase/dehydratase TERM 1021 718462 - 718442 - T 95 -12.6 -3.60627 | opp_overlap 718433 TCACCTCATTTTAAA GCCTCTCC GCGCA GGAGAGGC GCTAAAAAGTCCGTT Ctha_0612 719817 - 718510 - | pyrimidine-nucleoside phosphorylase TERM 1022 719697 - 719720 + g 74 -3.9 -5.00339 | opp_overlap 719697 ACATGGCCATCAACA TCGCAGA AACTTGATAG TCTGCGA TTTTTCCTTGTTGAT TERM 1023 720320 - 720353 + H 79 -3.9 -5.41143 | gap 1, overlap 720309 720321 720323 TTAGCAAAGCATAGC TTCTGATGTTGCTCAT AAA AAGAGCAACGTC-GAC TTTTTTTAAAACATC TERM 1024 720321 - 720352 + H 70 -7.4 -3.83963 | gap 1, overlap 720309 720320 720323 TAGCAAAGCATAGCT TCTGATGTTGCTCAT AAA AAGAGCAACGTC-GA CTTTTTTTAAAACAT TERM 1025 720387 - 720408 + H 71 -3.7 -5.00616 | gap 1, overlap 720392 TCTTTTTTTTAGATG GCGCA-GC ATCCATA GCATGCGC TTTTTTCAAACCGCC TERM 1026 721301 - 721285 - g 76 -8.7 -4.11484 | CCGAATGTTGGAAAA GATCGGC TCA GCCAATC ACATTCCTGAATTTA TERM 1027 721528 - 721539 + G 76 -4.4 -5.06816 | CGAGAAGAAGCTTTA TCCA AATG TGGA TTTTTATTCCGGCAT Ctha_0613 720446 - 721741 + | citrate synthase I Ctha_0614 724892 - 722049 - | excinuclease ABC, A subunit TERM 1028 722785 - 722771 - G 70 -2.1 -5.01811 | gap 1, opp_overlap 722783 GGATGAAAGTAAAAA CG-CCT GTGT AGGTCG CCGCATTGGAACGCG TERM 1029 724284 - 724262 - G 77 -12 -2.78216 | opp_overlap 724262 724261 CATCGCTATTAATCA CGAGCCGGTC GAC GACCAACTCG ATTTCGTGGATTTTA TERM 1030 725248 - 725235 - g 73 -2.4 -5.16038 | opp_overlap 725235, overlap 725230 ATACAATAAACAAAA CAAG CCTATT CTTG TTTTTTCGCGCCAAT TERM 1031 725235 - 725248 + G 70 -2.4 -5.00884 | opp_overlap 725230 725235 ATACAATAAACAAAA CAAG CCTATT CTTG TTTTTTCGCGCCAAT Ctha_0615 725185 - 725373 + | hypothetical protein Ctha_0616 725370 - 725762 + | cytochrome c-type biogenesis protein CcmE, putative TERM 1032 725937 - 725901 - g 76 -5.1 -4.86773 | overlap 725891 725903 CAAAACGAGCAAAAA CCCGCCC-TGCGCGACG AATGG CG-CACGCACGGACGCG ATTTCTTTTGGGTCA TERM 1033 726193 - 726206 + G 83 -6.7 -5.00138 | overlap 726184 726200 TCATGAGCGTTTTGA CGCTT TCGC AAGCG TTTTTGCTTTCGATG TERM 1034 727140 - 727120 - g 81 -3.9 -5.40072 | opp_overlap 727132, overlap 727124 727132 TTTGGTGGAAAAAAA TCGACAAGG AAA CCTTGATGA AGGCTTTTGCCGTGC TERM 1035 727205 - 727224 + G 71 -3.5 -4.81851 | CGTGATTTTGGGCTT GCACGAT CCGGCC ATCGCGC TTTTTGCCTTTGCGT TERM 1036 727748 - 727761 + G 76 -8.1 -4.11216 | opp_overlap 727733, overlap 727733 CGCTGCTAAACCGCT GCGCA TTTT TGCGC TTTTGGCCGTCACGC Ctha_0617 725796 - 728105 + | cytochrome c assembly protein TERM 1037 729070 - 729044 - g 78 -5.1 -5.00884 | overlap 729060 ATTTTCGCCAAAAAA GCGAATGGCAC AAACA GTCTCATTCGC GACGCCAAAGCAAAA Ctha_0618 728207 - 729367 + | DNA protecting protein DprA TERM 1038 729780 - 729758 - g 79 -9.2 -4.12942 | opp_overlap 729758, overlap 729748 CGAAACGTTTGAAAA CGAGCTTTCC GGC AAAAAGCTCG TTTTTTATTGCTCGG TERM 1039 729758 - 729780 + G 100 -7.8 -5.5112 | opp_overlap 729748 729758 CGAAACGTTTGAAAA CGAGCTTT CCGGCAA AAAGCTCG TTTTTTATTGCTCGG Ctha_0619 729375 - 729998 + | Rhodanese domain protein TERM 1040 730147 - 730124 - g 83 -4.6 -5.27335 | gap 1, opp_overlap 730128 GGCGGCAAACAAAAA CGTTGCGAATC GCT GAT-CGAAACG CTGGTTCGTGAATGC Ctha_0620 730007 - 730498 + | NUDIX hydrolase Ctha_0621 730508 - 731875 + | permease YjgP/YjgQ family protein TERM 1041 732438 - 732408 - g 84 -10.4 -3.98913 | opp_overlap 732408 732405 732403 TGGACAGGGAAATAA TTCAAGCGCTGCAC ACC GCGCCGCTCTTGAA ATATCTTCTAACTCG Ctha_0622 731900 - 732463 + | NUDIX hydrolase TERM 1042 733113 - 733102 - g 72 -3 -4.98531 | GCTTGAAATGAAAAA TCAA GGCT TTGA GGTGGTGTTCATGCA TERM 1043 733145 - 733168 + G 79 -11 -3.34398 | opp_overlap 733144 733145 733158 733159, overlap 733143 CAGTTCGACTATAAG CGCTTTGCTG AAAC CGGCGAAGCG TATTTGAAGGAACGC Ctha_0623 732983 - 733555 + | hypothetical protein TERM 1044 733992 - 733981 - g 86 -4.4 -5.46657 | GACTCGAAGAAAAAA GTCT CGGA AGAC TATGGCGCGCTGAAT Ctha_0624 733693 - 734151 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1045 734205 - 734242 + G 100 -13.6 -3.76492 | gap 1 TTTGAGTTTTACGCT GCTCTTTTGCCTGTCGT GCCAG GCGGC-GGCAAAAGAGC TTTCCTACGATTGGC TERM 1046 734659 - 734680 + G 87 -7.3 -5.24129 | CGTCAAATTCAAGGC TTTCGGCGA TTTC TCGCCAAAA TTTTTTATACACCAC Ctha_0625 734158 - 734934 + | hypothetical protein TERM 1047 735062 - 735072 + G 70 -2.4 -5.0133 | opp_overlap 735064, overlap 735054 GGCTTTGCGGTTAGA ACCG AGC CGGA TTTTTTCACCAACTC Ctha_0626 734963 - 735883 + | UbiA prenyltransferase Ctha_0627 736574 - 735981 - | bacteriochlorophyll 4-vinyl reductase Ctha_0628 737917 - 736610 - | PUCC protein TERM 1048 737249 - 737231 - G 74 -3.9 -5.04222 | gap 1 CAAGTAAATGAAAAA CAAT-CGC GCTT GCGGATTG CCGGCAACTGCTCCA TERM 1049 737960 - 737970 + H 77 -8.2 -3.96327 | opp_overlap 737959 GATCGATCCAAAAGT CGGC TGA GCCG TTTCTCATGAAACCT TERM 1050 738371 - 738385 + G 95 -2.7 -5.86332 | GTATGTTTGTTCTTG CCGCC GCATG GGCTG TTTTTTTTCGATTCG TERM 1051 738601 - 738591 - g 74 -5.4 -4.59853 | opp_overlap 738591 CGAAGGGGGGAAAAA GCTT TTC AAGC TTGATGATATTTTCC Ctha_0629 738277 - 738786 + | hypothetical protein TERM 1052 738848 - 738859 + G 86 -4.4 -5.48825 | opp_overlap 738832 ATTGACAATTTGCAA TGGA CACA TCCA TTTTTTTGACTGCTG TERM 1053 738975 - 738986 + G 74 -7.2 -4.27192 | TGGACACAAGTTGGC GCGC AGTG GCGC TTTTGATGGCACTTT Ctha_0630 738847 - 739644 + | biotin/acetyl-CoA-carboxylase ligase Ctha_0631 739648 - 740469 + | putative transcriptional acitvator, Baf family TERM 1054 740514 - 740546 + T 100 -13 -4.3898 | gap 1, opp_overlap 740518, overlap 740518 740544 TGCGCCGGGGAAACG T-AAAGAGGCCACTT GAAA AAGTGGCCTCTTTCA TTTTATCAACATGAT TERM 1055 740541 - 740518 - T 100 -15.4 -3.84451 | opp_overlap 740514 740518 CCGGGGAAACGTAAA GAGGCCACTT GAAA AAGTGGCCTC TTTCATTTTATCAAC TERM 1056 740518 - 740541 + T 100 -15.4 -4.26881 | opp_overlap 740518, overlap 740514 CCGGGGAAACGTAAA GAGGCCACTT GAAA AAGTGGCCTC TTTCATTTTATCAAC Ctha_0632 742807 - 740573 - | isocitrate dehydrogenase, NADP-dependent TERM 1057 742992 - 742943 - R 80 -9.7 -3.67026 | gap 1, overlap 742953 AAAAAGGAGGTGAAA TTTAAAGA-AAGACCTGTACAAAC AAA ACTTGTAAAGGCCTTCTCTTTAAA AATCACAGGAATTTA TERM 1058 742981 - 742953 - R 72 -5.3 -4.53439 | overlap 742943 TGAAATTTAAAGAAA GACCTGTACAAAC AAA ACTTGTAAAGGCC TTCTCTTTAAAAATC Ctha_0633 743948 - 743037 - | enoyl-(acyl-carrier protein) reductase (NADH) Ctha_0634 744699 - 744094 - | hypothetical protein TERM 1059 744784 - 744805 + r 85 -5.9 -5.34555 | opp_overlap 744784 CTTAAAATAAAAAAA GGTAGAC TTACACCT GTCTACC TTTTTTGTCCTATCA TERM 1060 744805 - 744784 - R 100 -5.9 -6.09196 | opp_overlap 744784 CTTAAAATAAAAAAA GGTAGAC TTACACCT GTCTACC TTTTTTGTCCTATCA Ctha_0635 746137 - 744833 - | arsenite-activated ATPase ArsA TERM 1061 744935 - 744949 + g 73 -4.2 -4.8622 | opp_overlap 744934 744937, overlap 744934 744937 AATTTCTTTGAAAAG CACACG GAG CGTGTC TTTTTCCTTCAAAAA TERM 1062 744937 - 744947 + g 71 -6.8 -4.05402 | opp_overlap 744937 744934, overlap 744934 744935 TTTCTTTGAAAAGCA CACG GAG CGTG TCTTTTTCCTTCAAA TERM 1063 745981 - 745966 - G 74 -5.4 -4.64766 | GTGACACGTCAAAAA CATCCG AAAG CGAATG CGCAGGATCGGAAGA Ctha_0636 746433 - 746221 - | addiction module toxin, Txe/YoeB family Ctha_0637 746723 - 746481 - | prevent-host-death family protein Ctha_0638 747460 - 746855 - | leucyl/phenylalanyl-tRNA/protein transferase TERM 1064 747001 - 746982 - G 77 -7.2 -4.39287 | gap 1 TCAAGCAGATCAAAA TCGCGA-TC TCG GAGTCGCGA GACCAACGCATGGAG TERM 1065 747601 - 747591 - R 71 -4 -5.00616 | TTTTCTTTCAAAAAA TTTG TCA CAAA ATATCGTCTGCAATT Ctha_0639 751120 - 747659 - | hypothetical protein TERM 1066 749416 - 749428 + g 75 -6.2 -4.43669 | GCACCGTCTCCAATC GCCG CTGCA CGGC TTTCGTTTTTTCAAT TERM 1067 749664 - 749674 + g 85 -6.8 -5.00616 | opp_overlap 749650 749663, overlap 749650 749649 ACGGTTAGGATAAGC TCCG AAC CGGA TTTTTTGCGAGACGA TERM 1068 750637 - 750653 + g 91 -2.2 -5.82388 | opp_overlap 750623 TCACGAACAGAATCG CGCC CGAAAAAAC GGCG TTTTTTTTCAACTTT TERM 1069 751800 - 751788 - g 71 -7.7 -3.86944 | overlap 751763 TCCACAACGAGGAAA TCGCA AAC TGCGA AAATATGGCTCGTCA Ctha_0640 751394 - 752494 + | translation initiation factor, aIF-2BI family TERM 1070 752535 - 752559 + F 100 -17.3 -5.63103 | opp_overlap 752529 752537 GAAGCACAATCGACA TAGGGCGAGAA ATG TTCTCGCCCTA TTTTTTTACTTGCAA TERM 1071 752557 - 752537 - f 100 -15.5 -2.96979 | opp_overlap 752535, overlap 752529 AGCACAATCGACATA GGGCGAGAA ATG TTCTCGCCC TATTTTTTTACTTGC Ctha_0641 752756 - 754267 + | outer membrane efflux protein Ctha_0642 754356 - 755699 + | efflux transporter, RND family, MFP subunit TERM 1072 755784 - 755763 - T 100 -14.5 -5.95286 | overlap 755778 ATCAAAAATAAAAAA CCGGCAGTT TTGA AACTGCCGG CTGACAGAAGGGAGA Ctha_0643 757107 - 755815 - | Flavocytochrome c sulphide dehydrogenase flavin-binding TERM 1073 756268 - 756282 + g 72 -5 -4.56597 | opp_overlap 756268 CTGCGGCGGAATGAA GTTGAT GAC ATCAGC TTTTTCAGCGCCAAA TERM 1074 756421 - 756433 + g 76 -7.7 -4.2558 | GAAAAGCATTTGTTT GGAGA ATT TCTCC TTTTCATCCAAAATG TERM 1075 756601 - 756635 + g 75 -2.8 -5.12617 | overlap 756594 756592 756602 TTGATCGCGCAAAAT CTCTGTTTGCTTTCCA GCT TGGAAGGCATGTGGAA TTTTTTCGCTGGTTG TERM 1076 756924 - 756895 - G 70 -5.1 -4.45083 | gap 1, overlap 756921 CGGACAGGTATAAAA GATTTC-CTTTGGC TCA ACCAAAGTGACATC AATAGACGGGTCAAA Ctha_0644 757464 - 757129 - | cytochrome c class I TERM 1077 757298 - 757278 - G 71 -7.5 -3.85698 | opp_overlap 757278 757283 TTTCTTTTCCATAAA GCGACGGCA TGA TGCCTTCAC TTTTTCCGTCTGGGC TERM 1078 757278 - 757298 + g 72 -5.3 -4.70659 | opp_overlap 757278, overlap 757283 TTTCTTTTCCATAAA GCGACGGCA TGA TGCCTTCAC TTTTTCCGTCTGGGC Ctha_0645 757841 - 757524 - | Sulphur oxidation protein SoxZ Ctha_0646 758305 - 757865 - | sulfur oxidation protein SoxY TERM 1079 758137 - 758156 + g 75 -6.6 -4.42238 | GCACGTCTATGGCAA TTTTATCA GTGG TGATAAAA TTTTGATTGCCATAA TERM 1080 758369 - 758352 - R 81 -5.5 -5.24129 | opp_overlap 758353 758359, overlap 758353 TTCGTTTATAAAAAA CGCCTCA GCGC TGAGGCT TTAAAGGCCGGTGCC TERM 1081 758353 - 758368 + r 74 -9 -3.53444 | opp_overlap 758352 758353, overlap 758359 TCGTTTATAAAAAAC GCCTCA GCGC TGAGGC TTTAAAGGCCGGTGC TERM 1082 758368 - 758353 - R 76 -9 -3.73995 | opp_overlap 758353 758359, overlap 758352 TCGTTTATAAAAAAC GCCTCA GCGC TGAGGC TTTAAAGGCCGGTGC TERM 1083 758359 - 758412 + r 100 -8.1 -5.53991 | opp_overlap 758353 758352 758375, overlap 758353 ATAAAAAACGCCTCA GCGCTGAGGCTTTAAAGGCCGGT GCCGCCAA GCCCACCTTCAAAGCTTCCGCGC TTTTTTTGCTAAATA Ctha_0647 758876 - 758421 - | hypothetical protein TERM 1084 758930 - 758944 + r 73 -7.1 -4.08064 | AACAACCTTTTGGCT TCGGC AATCC GCCGA TTTTGGCCGGAAATT Ctha_0648 759221 - 758910 - | sulfur relay protein, TusE/DsrC/DsvC family Ctha_0649 760003 - 759494 - | hypothetical protein TERM 1085 759853 - 759867 + g 70 -10 -3.02166 | overlap 759856 CCTCTTGAAGCTCAT CGATGG CGA CCATCG TCATTTCGTTGAGGA Ctha_0650 761268 - 760024 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1086 761201 - 761211 + g 72 -5.4 -4.44448 | opp_overlap 761201 TCTTTTTCCTCAAGA TTGG TGG CCAA TTTATTTGCCATCAT TERM 1087 761353 - 761342 - R 77 -5.8 -4.7254 | opp_overlap 761346 ATGCGCGACTAAAAA CCGT TTTC ACGG AAATTGTCGGGGAAG TERM 1088 761800 - 761757 - R 100 -9.9 -5.83822 | opp_overlap 761763 761768, overlap 761758 761759 761768 TAGATTGAAAAAAAA CCTAAAAAAAAGGCTTGGT GCTTTT ACCAAACCTTTTCTTTAAA AAATCGGATGCGGTC TERM 1089 761799 - 761758 - R 86 -11.2 -4.08666 | opp_overlap 761763 761768, overlap 761757 761759 761768 AGATTGAAAAAAAAC CTAAAAAAAAGGCTTGGT GCTTTT ACCAAACCTTTTCTTTAA AAAATCGGATGCGGT TERM 1090 761798 - 761759 - R 91 -12.5 -3.03573 | opp_overlap 761763 761768, overlap 761758 761757 761768 GATTGAAAAAAAACC TAAAAAAAAGGCTTGGT GCTTTT ACCAAACCTTTTCTTTA AAAAATCGGATGCGG TERM 1091 761768 - 761789 + r 74 -5.1 -4.87133 | opp_overlap 761759 761758 761757 761768, overlap 761763 AAAACCTAAAAAAAA GGCTTGGTG CTTT TACCAAACC TTTTCTTTAAAAAAT TERM 1092 761789 - 761768 - R 100 -6.6 -5.91981 | opp_overlap 761768 761763, overlap 761759 761758 761757 AAAACCTAAAAAAAA GGCTTGGT GCTTTT ACCAAACC TTTTCTTTAAAAAAT Ctha_0651 762276 - 761821 - | ribosomal protein L9 Ctha_0652 762573 - 762301 - | ribosomal protein S18 TERM 1093 762660 - 762617 - R 100 -6.2 -6.04324 | opp_overlap 762632, overlap 762619 762624 TCAAAAAATAAAAAA CACTAAAGCAAGCAATATTT AAAA AAATATTGCTTGCCCCAAAA CTTATTTCCTTAAAT TERM 1094 762658 - 762619 - R 90 -11 -4.6155 | opp_overlap 762632, overlap 762617 762624 AAAAAATAAAAAACA CTAAAGCAAGCAATATTT AAAA AAATATTGCTTGCCCCAA AACTTATTTCCTTAA TERM 1095 762653 - 762624 - R 100 -15.3 -4.20024 | opp_overlap 762632, overlap 762619 762617 ATAAAAAACACTAAA GCAAGCAATATTT AAAA AAATATTGCTTGC CCCAAAACTTATTTC Ctha_0653 763165 - 762677 - | single-strand binding protein TERM 1096 762796 - 762817 + g 76 -2.1 -5.34857 | opp_overlap 762796 AAATTTCTTCAACCA CGCTGTAGT CATC ACCGCCGCG TTTTCTTTTATTTAA Ctha_0654 763655 - 763254 - | ribosomal protein S6 TERM 1097 763476 - 763490 + g 72 -6.4 -4.19953 | CTCAATATGTACGTA GTAACC AAT GGTTGC TTTTCCAATTGGATA TERM 1098 764589 - 764609 + G 77 -3.9 -5.1356 | opp_overlap 764569, overlap 764569 TCGCCATTGCCCGAG CGCTTTTGC TCA GAAAACGCG TTTTTATTGCTGACG Ctha_0655 764147 - 764800 + | ABC transporter-related protein Ctha_0657 765743 - 766096 + | hypothetical protein Ctha_0658 767396 - 766149 - | hypothetical protein TERM 1099 766990 - 767004 + g 72 -2.8 -5.00616 | opp_overlap 767003, overlap 766978 ATGGCGTCTTTAAGC GCTTGT TTT AAAAGC TTTTTTAAGCGCGGA TERM 1100 767347 - 767333 - G 76 -2.1 -5.31456 | GCAACGTAGAAAAAA GAAAC CCTTT GCTTC TAATGCGCTCAAGAT TERM 1101 767724 - 767734 + H 73 -4 -5.0538 | TATTTAAGAATTTCA TTTC CTT GAAA TTTTTTGAAATGCAA TERM 1102 767765 - 767785 + H 70 -6.1 -4.22591 | overlap 767767 767768 TATCCGCGAATCCAT TTTGGGGAA AAA TTCCCCGTA TTTCTTGACATTATT TERM 1103 767767 - 767783 + H 74 -8.7 -3.70139 | overlap 767765 767768 TCCGCGAATCCATTT TGGGGAA AAA TTCCCCG TATTTCTTGACATTA TERM 1104 767768 - 767782 + H 74 -10 -2.8136 | overlap 767767 767765 CCGCGAATCCATTTT GGGGAA AAA TTCCCC GTATTTCTTGACATT Ctha_0659 767843 - 769750 + | integral membrane sensor hybrid histidine kinase TERM 1105 769837 - 769818 - T 100 -10 -5.31519 | opp_overlap 769818 769820 AGATCGAAACAAAAA GAGCGCTT TCAC AAGCGCCC TTTTTGGAAATTTAA TERM 1106 769818 - 769837 + T 83 -7.8 -4.64657 | opp_overlap 769818, overlap 769820 AGATCGAAACAAAAA GAGCGCTT TCAC AAGCGCCC TTTTTGGAAATTTAA Ctha_0660 770694 - 769873 - | purine nucleoside phosphorylase I, inosine and guanosine-specific Ctha_0661 771964 - 770714 - | aminotransferase class I and II TERM 1107 771609 - 771583 - G 77 -7.2 -4.4078 | GCGCTGGAACTAAAA CCGCATCGCCTG GCT CAAGCAAGGCAG TAAAAACCAAATCGG Ctha_0662 772982 - 772008 - | DivIVA family protein TERM 1108 773247 - 773271 + r 100 -11.6 -4.84761 | opp_overlap 773247 TTTCATAGTAAAAAA GGGAGATTTT CCATA AAAATCTCCC TTTTTCTGACGCTAT TERM 1109 773271 - 773247 - R 100 -12.3 -5.21709 | opp_overlap 773247 TTTCATAGTAAAAAA GGGAGATTTTC CAT AAAAATCTCCC TTTTTCTGACGCTAT Ctha_0663 774618 - 773299 - | membrane protein involved in aromatic hydrocarbon degradation TERM 1110 774322 - 774312 - G 72 -5.4 -4.41494 | CATGCGGAACTAAAA TGAC ATC GTCA TCGGCACTTGTGGTT Ctha_0664 774750 - 774640 - | hypothetical protein TERM 1111 775052 - 775027 - g 74 -3.3 -5.06414 | opp_overlap 775051, overlap 775045 775047 TTCTGCTAAGAAAAA GCACAACATAT TAAA ACATACTGCGC CTGAAGCGCTGAAAG Ctha_0665 774995 - 775714 + | phosphoesterase PA-phosphatase related Ctha_0666 777306 - 775729 - | glycosyl transferase family 39 TERM 1112 776152 - 776136 - G 70 -2.2 -5.08824 | gap 1, overlap 776140 776141 TTTTGAGGTAAAAAA CACAGGC GAAC GCC-GCG CCAAACGGAAGCAAA TERM 1113 777375 - 777361 - H 72 -8.6 -3.37164 | opp_overlap 777360 TGAAAAATACGAAGA TGCGAA TTT TTCGCA AATATTTTCCACCGA TERM 1114 777730 - 777703 - g 73 -7.8 -4.09685 | CGCTATTTTGGAAAA TGTGGAATGCTT GCGA AAGCATCGCACA GGCTTCATTAAACAC Ctha_0667 777606 - 778310 + | transcriptional activator, TenA family Ctha_0668 778336 - 778713 + | hypothetical protein TERM 1115 778740 - 778773 + T 83 -10.4 -3.87075 | opp_overlap 778740 778747, overlap 778738 778741 778747 CATTACATCCAATTA CCAAAAAGGAGCGC TTTTTC GTGCTCCTTTTTGC TTTATAAAACCTGAT TERM 1116 778741 - 778772 + T 95 -13.9 -2.91924 | opp_overlap 778740 778747, overlap 778738 778740 778747 ATTACATCCAATTAC CAAAAAGGAGCGC TTTTTC GTGCTCCTTTTTG CTTTATAAAACCTGA TERM 1117 778747 - 778766 + T 85 -7.1 -5.04601 | opp_overlap 778740 778747, overlap 778738 778741 778740 TCCAATTACCAAAAA GGAGCGC TTTTTC GTGCTCC TTTTTGCTTTATAAA TERM 1118 778766 - 778747 - T 72 -4.9 -4.81083 | opp_overlap 778738 778747 778741 778740, overlap 778740 TCCAATTACCAAAAA GGAGCGC TTTTTC GTGCTCC TTTTTGCTTTATAAA Ctha_0669 780474 - 778813 - | peptidase M28 TERM 1119 779315 - 779301 - G 72 -2.8 -5.0538 | overlap 779278 CTTCACCCGAAAAAA GCATAA AAA TAATGC TGCGACGCGGTTTTA Ctha_0670 781721 - 780498 - | sodium:dicarboxylate symporter TERM 1120 781343 - 781359 + g 72 -2.9 -5.07652 | opp_overlap 781345, overlap 781345 781346 CAAGCGAAAGCAAAA TGTCGGA AAT TCCGGTG TTTTCTTTTCCCACA TERM 1121 781843 - 781831 - H 72 -5.5 -4.5538 | overlap 781832 ATAAAACTTATAAAA CGCAC CTC GTGCA ACCTCCTTAGGGAAA TERM 1122 782086 - 782099 + G 72 -5.3 -4.56597 | TATTACCGGTGTGCT CATGA CCTT TCATG TTTTTCCAAGAGAGC Ctha_0671 782006 - 782392 + | hypothetical protein TERM 1123 782598 - 782568 - g 79 -4.6 -5.1861 | overlap 782570 TTGAGGACGAAAAAA TTGCCGTCGGTGTG AAG CACGACGACGAGAA CCTCTATGTGTGCAT TERM 1124 782748 - 782732 - g 71 -10.1 -3.16564 | CCCGTAGGTCAGCAA GGCGGCA TGA TGCCACC ACAAGGCCAAATGCC TERM 1125 782822 - 782787 - g 70 -2.4 -5.01422 | overlap 782791 GCACAGAAAAACAAA GCAGCAGCACCTCGTC GATG GACAAACCGCTGGAGC GCAAATTCGCCAAGC TERM 1126 782899 - 782885 - g 73 -4.2 -4.79223 | TCAGACGATCAAAAA GATACG CTG CGAATC AACTTCAAAGACTTG Ctha_0672 782405 - 783286 + | hypothetical protein TERM 1127 783310 - 783356 + T 78 -11 -2.79878 | opp_overlap 783322, overlap 783322 TTTTGATAGACTGGC CGAACGAAAGAAGCCGCTTC ATTTTTC GAAGCGGCTTTTTTTATGCG ATTTGAATCGCTAAC TERM 1128 783344 - 783322 - T 86 -11.3 -4.0825 | opp_overlap 783322 783310 GGCCGAACGAAAGAA GCCGCTTCA TTTTT CGAAGCGGC TTTTTTTATGCGATT TERM 1129 783322 - 783344 + T 100 -10.6 -5.63504 | opp_overlap 783322, overlap 783310 GGCCGAACGAAAGAA GCCGCTTC ATTTTTC GAAGCGGC TTTTTTTATGCGATT Ctha_0673 784025 - 783405 - | hypothetical protein TERM 1130 784253 - 784278 + r 100 -9 -6.34424 | opp_overlap 784253 AATCTGAAAAAAAAA GCAGCAACGC ATGTAG GCCTTGCTGC TTTTTTTTTTGAGAA TERM 1131 784278 - 784253 - R 100 -9 -6.10489 | opp_overlap 784253 AATCTGAAAAAAAAA GCAGCAACGC ATGTAG GCCTTGCTGC TTTTTTTTTTGAGAA Ctha_0674 785058 - 784309 - | 3-oxoacyl-(acyl-carrier-protein) reductase Ctha_0675 785999 - 785076 - | malonyl CoA-acyl carrier protein transacylase Ctha_0676 787126 - 786140 - | 3-oxoacyl-(acyl-carrier-protein) synthase III TERM 1132 787218 - 787203 - R 86 -7.6 -4.90266 | opp_overlap 787201 787203 GTCATTAACTAAAAA TCAACC GCAC GGTTGA TGTTTCAACATAGAG Ctha_0677 788061 - 787510 - | small GTP-binding protein TERM 1133 787842 - 787828 - G 77 -7 -4.37871 | CCAAACAAAATTAAA CCTGGC CTG GCCTGG CGTCCCATAAATATT Ctha_0678 788767 - 788063 - | hypothetical protein Ctha_0679 789166 - 788840 - | hypothetical protein TERM 1134 788906 - 788924 + g 83 -8.8 -4.32436 | overlap 788908 CTTGGTGAGTTCCTG CTGCGCAT CGT ATGCGCTG TTTTCCTCATGATGT TERM 1135 788908 - 788922 + g 79 -10 -3.76141 | overlap 788906 TGGTGAGTTCCTGCT GCGCAT CGT ATGCGC TGTTTTCCTCATGAT Ctha_0680 789562 - 789191 - | Roadblock/LC7 family protein Ctha_0681 789843 - 789562 - | hypothetical protein TERM 1136 789908 - 789888 - R 74 -4.8 -5.00616 | opp_overlap 789888 TTTTTCGCTAAAAAA CGATAAAA AAACA TTTTACCG TTATAAAAACAGCTC TERM 1137 790027 - 789999 - R 73 -8.3 -3.58888 | opp_overlap 789999, overlap 789997 789994 789992 AATCAAAACATAACA GTTAAAAAACTCA CTT TGTGCTTTTTAAC TTTATTCCAATACCC Ctha_0682 791042 - 790584 - | hypothetical protein Ctha_0683 791327 - 791061 - | Phosphotransferase system, phosphocarrier protein HPr Ctha_0684 792325 - 791324 - | GTP-binding protein Obg/CgtA TERM 1138 792398 - 792414 + H 70 -5.1 -4.56597 | opp_overlap 792397, overlap 792387 ATTCGCCTTACGAAC GGCTTTT GCC AAATGCC TTTTTCCCAAAAAAC TERM 1139 793069 - 793046 - g 93 -9.5 -4.56775 | overlap 793063 ACCTTGCGCGAAAAA CGCTTGGCG AAAAAA CGCCCAGCG TGGAAGAAATTCAAG TERM 1140 794520 - 794489 - g 70 -10.8 -2.5409 | gap 1 ACAATCTTGAAGCCA CGCCCGCCGA-AGGC ACG GCCTATCGCCTGGCG AAGTTGGACAAAAAA TERM 1141 794563 - 794537 - g 86 -4.5 -5.61596 | gap 2 AGTTGGACAAAAAAA CGCTGGCGGGCAT CCA ATG--CGCCAACG AAACGCGTTATCAAA Ctha_0685 792880 - 794979 + | anaerobic ribonucleoside-triphosphate reductase TERM 1142 795126 - 795153 + G 72 -10.6 -2.7634 | overlap 795125 CCACAATCCCGAGCT AGTCTTGCCGGA GCAA TTCGGCAAGACC CTTTCGCCTGCGCTT TERM 1143 795211 - 795188 - g 72 -5.2 -4.58395 | gap 1, overlap 795197 TTGATTTTCTAAAAA CGC-GCAAAGG CCG CCTCAGCAGCG TAACCATCACTGGCG TERM 1144 795309 - 795297 - g 78 -5.5 -4.85782 | TCCGTTAAAAATAAA GCTCG ATA CGAAC GGCGCTTTTCCCGAA Ctha_0686 795010 - 795624 + | anaerobic ribonucleoside-triphosphate reductase activating protein Ctha_0687 797491 - 795944 - | Alkaline phosphatase TERM 1145 796223 - 796198 - G 71 -9.7 -3.16564 | opp_overlap 796212 CGGCCACTTCACGAA CCGCACAAACG GCGT CGTTTGCGTGG CACGCCCAGTCGATT TERM 1146 796871 - 796885 + g 73 -4.2 -4.8622 | GGTCATGTTCAGCGA GCCTAA ATA TTTGGC TTTTTGGTTGCGCAA TERM 1147 797706 - 797672 - H 85 -7.4 -5.1287 | opp_overlap 797665 797672 797672, overlap 797674 TTCAGATCTAAAAAA CACTTTTTTATCATTT ATG AATTGATAAAAAAGCA GTTATTTAGGAACAG TERM 1148 797704 - 797674 - H 85 -10 -4.19215 | opp_overlap 797665 797672 797672, overlap 797672 CAGATCTAAAAAACA CTTTTTTATCATTT ATG AATTGATAAAAAAG CAGTTATTTAGGAAC TERM 1149 798207 - 798245 + G 81 -4.7 -5.26316 | gap 1, opp_overlap 798206 798208, overlap 798208 GCAAAGGAAAGAATT ACGG-GACTTTCTTTGAA AAAC TTCAAGGAAAATCACCGC TTTTTTGTACGCTCG TERM 1150 798208 - 798244 + G 72 -8.2 -3.75067 | gap 1, opp_overlap 798206 798208, overlap 798207 CAAAGGAAAGAATTA CGG-GACTTTCTTTGAA AAAC TTCAAGGAAAATCACCG CTTTTTTGTACGCTC TERM 1151 798308 - 798326 + G 82 -3 -5.4588 | TGCCATCACAACACC GCTTGCAA AAC TTGCCCGC TTTTTTCTGATTTTC TERM 1152 799505 - 799495 - g 74 -6.8 -4.21194 | TCGGAGCATGGAAAA TCGC CAT GCGA ATCAAATGCCCCTTG TERM 1153 799916 - 799881 - g 79 -10.6 -3.54543 | gap 1, overlap 799864 AGCGATGGGCGGAAA TTATCGGCTATACGCTC GAA GAGCTT-CAGCCGATAA CAAGCCAAACGCGCC TERM 1154 799958 - 799970 + G 70 -4.8 -4.4078 | CATCCAGAAGATTTA TCGC ACTCA GCGA TTTTGCTTAAAGAAC TERM 1155 800018 - 799997 - g 70 -2.3 -5.09173 | gap 1, overlap 800014 GAACATTTCAAAAAA CGCAC-CA GCCAATA TGAGTGCG AAGTTCGCATGAAGC TERM 1156 800565 - 800549 - g 82 -11.5 -3.64703 | overlap 800533 800550 800559 GTTTCTGCACGCAAA CGCGCCG AAA CGGCGCA GCAGGAAAGCCGAGC TERM 1157 800564 - 800550 - g 79 -12.8 -2.78679 | overlap 800533 800549 800559 TTTCTGCACGCAAAC GCGCCG AAA CGGCGC AGCAGGAAAGCCGAG Ctha_0688 797975 - 802438 + | multi-sensor hybrid histidine kinase TERM 1158 802492 - 802442 - f 100 -12 -4.58283 | opp_overlap 802453 802457, overlap 802453 802457 GAAGTGCTTTAAAAA GCCCGACAAAATAAAGGCGTAGAA TCT TGCTACGCCTTTATTTTCCCGCCC ATTTCGTCTCCAAAA TERM 1159 802453 - 802481 + F 100 -13.3 -4.0896 | opp_overlap 802442 802453 802457, overlap 802457 AAAAGCCCGACAAAA TAAAGGCGTAGAA TCT TGCTACGCCTTTA TTTTCCCGCCCATTT TERM 1160 802481 - 802453 - f 100 -13.3 -4.41844 | opp_overlap 802453 802457, overlap 802442 802457 AAAAGCCCGACAAAA TAAAGGCGTAGAA TCT TGCTACGCCTTTA TTTTCCCGCCCATTT TERM 1161 802457 - 802477 + F 89 -9.7 -4.64861 | opp_overlap 802453 802442 802457, overlap 802453 GCCCGACAAAATAAA GGCGTAGAA TCT TGCTACGCC TTTATTTTCCCGCCC TERM 1162 802477 - 802457 - f 91 -9.7 -4.77173 | opp_overlap 802457 802453, overlap 802453 802442 GCCCGACAAAATAAA GGCGTAGAA TCT TGCTACGCC TTTATTTTCCCGCCC TERM 1163 802599 - 802621 + F 75 -3.4 -5.26875 | opp_overlap 802602 802605, overlap 802577 802585 802602 802605 TTTTGCATGGTAAAA AAACAGTTGC CTT GCAAATGTTC TTTTTTGCTTCACAA TERM 1164 802618 - 802602 - f 82 -5.1 -5.44119 | opp_overlap 802577 802585 802599 802602 802605, overlap 802605 TGCATGGTAAAAAAA CAGTTGC CTT GCAAATG TTCTTTTTTGCTTCA TERM 1165 802602 - 802618 + F 72 -5.1 -4.72473 | opp_overlap 802602 802605, overlap 802577 802585 802599 802605 TGCATGGTAAAAAAA CAGTTGC CTT GCAAATG TTCTTTTTTGCTTCA TERM 1166 802938 - 802953 + G 72 -5.4 -4.44277 | gap 1, overlap 802941 CTGATCATTTTTGTG GTGGCCG TTG CGG-CAC TTTTGGCTTTTGCTA TERM 1167 803099 - 803072 - g 74 -8.4 -3.86015 | gap 1 GACGGTTGCCACAAA GGCCAACGTGCGC ACC ACGCACG-CAGCC AGAACTGGCCTTGCG Ctha_0689 802752 - 804821 + | V-type H(+)-translocating pyrophosphatase TERM 1168 804869 - 804889 + F 100 -12.6 -5.79526 | CGTCTTTATATTTTG CGGCCTCT TTTTT AGAGGCCG TTTTTTTTCACCTGT TERM 1169 804991 - 805022 + F 73 -8.1 -3.61517 | overlap 804988 ACTCGTTCCCGAGTC GTTCAGCATGACA TCGTTT TGTCATTCTGAGC TTCTTGGCCAAGAAT TERM 1170 805174 - 805205 + F 73 -8.1 -3.61517 | overlap 805171 GACTCGTTCCAAGTC GTTCAGCATGACA TCGTTT TGTCATTCTGAGC TTCTTGGCCAAGAAT TERM 1171 805266 - 805297 + F 73 -8.1 -3.61517 | opp_overlap 805241, overlap 805263 ACTCGTTCCCGAGTC GTTCAGCATGACA TCGTTT TGTCATTCTGAGC TTCTTGGCCAAGAAT TERM 1172 805357 - 805388 + F 73 -8.1 -3.61517 | overlap 805354 GACTCGTTCCAAGTC GTTCAGCATGACA TCGTTT TGTCATTCTGAGC TTCTTGGCCAAGAAT TERM 1173 805432 - 805463 + F 85 -11.7 -3.61517 | GAATGGATGCTCGCT GCTCAGCATGACA TCGTTT TGTCATTCTGAGC TTCTTGGCCAAGAAT TERM 1174 805507 - 805538 + F 85 -11.7 -3.61517 | GAGTGGATGCTCGCT GCTCAGCATGACA TCGTTT TGTCATTCTGAGC TTCTTGGCCAAGAAT Ctha_0690 805608 - 806216 + | Aminoacyl-tRNA hydrolase TERM 1175 806348 - 806375 + T 100 -17.2 -4.56775 | opp_overlap 806355 TCCGATTTTTCTGAC GTAGAGACAAGG CATG CCTTGTCTCTAC TTTTTCAAAAACGGT Ctha_0691 807577 - 806405 - | hypothetical protein TERM 1176 807040 - 807056 + g 80 -10.1 -3.90048 | overlap 807038 GCGTTCCTTTCACCT CCACGCT GAT GGCGTGG TCTTTTTCGCGCACC TERM 1177 807118 - 807103 - G 71 -6.8 -4.07568 | TGCCGTCTTGCAAAA TGACGC CGTA GCGCCA TACCGAATCGGACTT TERM 1178 807489 - 807514 + g 74 -10.5 -3.22943 | TGGCTAATCCATTCC GGGTTCAGGAC TAAG GTCTTGAACTC TTCCATCTCTTTATA Ctha_0692 808785 - 807601 - | Miro domain protein TERM 1179 808706 - 808682 - G 76 -4.1 -5.02074 | TTACTTCCCAAAAAA GGCAATGCCCG CAC CGCACAGCGCC ATGCAAACCGCACCA TERM 1180 808861 - 808888 + r 100 -11.4 -5.1675 | opp_overlap 808861 GGACAAAATGAAAAA GCCCTTACAC TTTTTAGC GTGTAAGGGC TTTTTTGCTAAATGG TERM 1181 808888 - 808861 - R 100 -11.4 -5.1417 | opp_overlap 808861 GGACAAAATGAAAAA GCCCTTACAC TTTTTAGC GTGTAAGGGC TTTTTTGCTAAATGG Ctha_0693 810290 - 808920 - | ammonium transporter TERM 1182 809263 - 809273 + g 78 -5.4 -4.87389 | ACATCAAGTGTGTCG TCCA GCG TGGA TTTATTTTTCCAGTA TERM 1183 809465 - 809485 + g 70 -9.7 -3.01712 | opp_overlap 809459, overlap 809459 809457 809469 TCCATGCAAGCATCG CCGACGCAG ATG CTGTGTTGG TATTCAAAAACGCGA TERM 1184 810757 - 810747 - g 74 -8.2 -3.9344 | opp_overlap 810747 810746 AATGCGAAGATTAAA GCCG AAT CGGC CTTTGTTGAAAAGTT Ctha_0694 810702 - 811700 + | ATPase associated with various cellular activities AAA_3 Ctha_0695 811784 - 812407 + | Pathogenesis-related transcriptional factor and ERF protein TERM 1185 812440 - 812481 + T 100 -14.8 -3.30243 | gap 1, opp_overlap 812446 812452, overlap 812446 812452 TGCCGGTTATTCTTT CGAAATGAAAAAGCCGCCT ATAAA AGGCGGCTTTTT-ATTTTG TTCTCAAAAGTCAAT TERM 1186 812446 - 812476 + T 100 -12.7 -4.77165 | opp_overlap 812446 812452, overlap 812440 812452 TTATTCTTTCGAAAT GAAAAAGCCGCCT ATAAA AGGCGGCTTTTTA TTTTGTTCTCAAAAG TERM 1187 812476 - 812446 - T 89 -12.7 -2.72144 | opp_overlap 812446 812440 812452, overlap 812452 TTATTCTTTCGAAAT GAAAAAGCCGCCT ATAAA AGGCGGCTTTTTA TTTTGTTCTCAAAAG TERM 1188 812470 - 812452 - T 100 -11.7 -4.98531 | opp_overlap 812446 812440 812452, overlap 812446 TTTCGAAATGAAAAA GCCGCCT ATAAA AGGCGGC TTTTTATTTTGTTCT TERM 1189 812452 - 812470 + T 100 -11.7 -5.64321 | opp_overlap 812452 812446, overlap 812446 812440 TTTCGAAATGAAAAA GCCGCCT ATAAA AGGCGGC TTTTTATTTTGTTCT Ctha_0696 815264 - 812496 - | pyruvate, phosphate dikinase TERM 1190 814954 - 814967 + g 82 -3.1 -5.52986 | ACAAGCAACGGATTT TTTGG GTCA CCGAA TTTTTTTCCTACAAT TERM 1191 815460 - 815447 - R 79 -4.5 -5.20328 | TCTGAAAAAAATAAA CCCGT TAAA ACAGG AGAGAAAAGTACACA Ctha_0697 816413 - 815451 - | hypothetical protein TERM 1192 816378 - 816337 - G 100 -16.8 -6.11644 | opp_overlap 816342 GCACGGAAAAAAAAA GAAAAGCAACCCAGCCGG CTTGCT CCAGCTGAATTGCTTTTC ATAAACGAAATGAGA Ctha_0698 817323 - 816406 - | hypothetical protein TERM 1193 817747 - 817757 + G 73 -2.4 -5.15381 | GTTGGGCAATTTTAT ACCG AAT CGGC TTTTTTGGGTATATT TERM 1194 818329 - 818311 - g 71 -9.6 -3.19371 | overlap 818324 ACCGAGTCAATGGAA CTTCGCCT TCA AAGCGAAG CCATTCCATCGCAAT Ctha_0699 817579 - 818445 + | inner-membrane translocator Ctha_0700 818586 - 819149 + | hypothetical protein TERM 1195 819250 - 819222 - f 78 -10.4 -3.05844 | overlap 819224 CGTTTGAGCTGAAGA TATTTGCGCGAG CTCAC CTCGTGCAAATA TCCCTCCAAATAGCT TERM 1196 819248 - 819224 - f 70 -8.6 -3.08813 | overlap 819222 TTTGAGCTGAAGATA TTTGCGCGAG CTCAC CTCGTGCAAA TATCCCTCCAAATAG Ctha_0701 819322 - 820002 + | Endopeptidase Clp TERM 1197 820069 - 820040 - f 100 -19.5 -2.95476 | opp_overlap 820040 ACTATTGATTAGACA GCCATTGCTTGAG AATG CTCAAGCAATGGC TTTTTTTTATTCAGT TERM 1198 820040 - 820069 + F 100 -19.5 -6.11243 | opp_overlap 820040 ACTATTGATTAGACA GCCATTGCTTGAG AATG CTCAAGCAATGGC TTTTTTTTATTCAGT TERM 1199 820691 - 820712 + G 80 -6.5 -4.8743 | CGCCTTTGAAGATAT CGGCATTCC CATT GGCATGCTG TTTATTTGTTTTGGC TERM 1200 821029 - 821040 + G 78 -5.8 -4.86731 | opp_overlap 821025, overlap 821027 821026 CTCACAAAAATGGCA GCCA GCGC TGGC TTTTGTTTCGCGGAA TERM 1201 821317 - 821302 - g 76 -9 -3.75229 | opp_overlap 821311 TAAAGGATATTGAAA CCTCTG CCAT CAGAGG CGCTGAGTTGGTTAA Ctha_0702 820380 - 821894 + | multi-sensor signal transduction histidine kinase Ctha_0703 821891 - 822835 + | protein of unknown function DUF472 TERM 1202 822936 - 822956 + T 100 -11.9 -4.37886 | opp_overlap 822936 CAGTAGACCCAAAAA GTCCATCGT TTG GCGATGGAC TTTTATAAAAAATGG TERM 1203 822956 - 822936 - T 91 -11.2 -4.7173 | opp_overlap 822936 CAGTAGACCCAAAAA GTCCATCG TTTGG CGATGGAC TTTTATAAAAAATGG Ctha_0704 823263 - 822982 - | histone family protein DNA-binding protein TERM 1204 823591 - 823609 + G 74 -7.3 -4.36914 | opp_overlap 823590 GATTTCTCATCACAC GCCGGGC AATAA GCGCGGC TTTTATCAAGCCAAA Ctha_0705 823505 - 824071 + | translation elongation factor P TERM 1205 824193 - 824173 - g 100 -9.1 -5.05601 | overlap 824174 GACGACATACAAAAA CTCATCAAG CTG CTTGATGAA TCAAGCCTTGACGAA TERM 1206 824192 - 824174 - g 79 -10.4 -3.62276 | overlap 824173 ACGACATACAAAAAC TCATCAAG CTG CTTGATGA ATCAAGCCTTGACGA Ctha_0706 824149 - 824676 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein Ctha_0707 824712 - 826046 + | acetyl-CoA carboxylase, biotin carboxylase TERM 1207 826087 - 826073 - T 93 -4.2 -5.95166 | opp_overlap 826075 826086, overlap 826075 TTCAAGGAAAAAAAA CAGAGC GCG GCTCTT GTTTCTCAAGCAAAT TERM 1208 826085 - 826075 - T 77 -6.8 -4.61485 | opp_overlap 826075, overlap 826073 CAAGGAAAAAAAACA GAGC GCG GCTC TTGTTTCTCAAGCAA TERM 1209 826075 - 826085 + T 71 -6.8 -4.06419 | opp_overlap 826075 826073 CAAGGAAAAAAAACA GAGC GCG GCTC TTGTTTCTCAAGCAA TERM 1210 826125 - 826144 + T 100 -8.6 -5.2189 | gap 1, opp_overlap 826125 TTTTTCAATAAAAAA GGGGCGTTC TAT GAA-GCCCC TTTTTTCGTACTTGC TERM 1211 826144 - 826125 - T 100 -8.6 -5.4505 | gap 1, opp_overlap 826125 TTTTTCAATAAAAAA GGGGCGTTC TAT GAA-GCCCC TTTTTTCGTACTTGC Ctha_0708 827983 - 826169 - | aspartyl-tRNA synthetase Ctha_0709 829852 - 828164 - | apolipoprotein N-acyltransferase TERM 1212 828692 - 828681 - G 76 -4.4 -5.04868 | GCAAAGGAAAGAAAA GGAA CATA TTCC ATGTAAGGCACGCGC Ctha_0710 830179 - 831291 + | bacteriochlorophyll A protein TERM 1213 831314 - 831332 + T 100 -12.4 -6.47228 | opp_overlap 831314 GAAATTCTGTTAAAA GCCCGACG ATT TGTCGGGC TTTTTTTTTTGCTTC TERM 1214 831332 - 831314 - T 90 -11.7 -4.10453 | opp_overlap 831314 GAAATTCTGTTAAAA GCCCGAC GATTT GTCGGGC TTTTTTTTTTGCTTC TERM 1215 831441 - 831420 - T 100 -8.7 -5.71712 | opp_overlap 831419 831420 CTTCACACAAAAAAA CGGCCTC ACAAAAAG GAGGCCG CTTGATAAATTATTT Ctha_0711 835874 - 831471 - | Glutamate synthase (ferredoxin) TERM 1216 832350 - 832338 - G 80 -5.5 -5.06414 | opp_overlap 832346, overlap 832346 GCCGTTGAAGAAAAA GCTGA AAT CCAGC TTGCGCTTGTTGATA TERM 1217 833085 - 833101 + g 74 -5.9 -4.564 | CCCGCCTTCACCAGG TTTTGCA CCT TGCGAAA TTTTGATTTGCAGTT TERM 1218 833286 - 833268 - G 70 -9.6 -3.06515 | opp_overlap 833275, overlap 833272 CTTCATGGCCAAAAT CAAATCGC GCT GCGATTCG GCGTTAATCGCGCCA TERM 1219 833282 - 833272 - G 74 -6.8 -4.20136 | opp_overlap 833275, overlap 833268 ATGGCCAAAATCAAA TCGC GCT GCGA TTCGGCGTTAATCGC TERM 1220 834465 - 834453 - G 81 -3.3 -5.4148 | GAAATAATCAAAAAA CGAGC GCG GCTGG TCGGAGAAAATCGCA TERM 1221 835090 - 835112 + g 80 -7 -4.56597 | opp_overlap 835103 ACGCGCGTGATAACT TCGTTCGG AATCAGC CCGAGCGA TTTTTCGCGCGAAGC TERM 1222 835229 - 835269 + g 76 -8.1 -4.11216 | opp_overlap 835242 835244 835245 835251 835252, overlap 835230 GCGTGTTCGTGCTGA ACCGGCGATGAAACAGCGC AAA GCGCGTTTTGAACGCCGGA TTTTGCAAATCAAGG TERM 1223 835230 - 835268 + g 78 -11.6 -3.06515 | opp_overlap 835242 835244 835245 835251 835252, overlap 835229 CGTGTTCGTGCTGAA CCGGCGATGAAACAGCGC AAA GCGCGTTTTGAACGCCGG ATTTTGCAAATCAAG TERM 1224 836940 - 836927 - g 89 -4.5 -5.75342 | TTGCCGGAAAAAAAA CGCAT TGAA ACGCG CTCCGATTCGGAAGA Ctha_0712 836108 - 838192 + | pentapeptide repeat protein TERM 1225 838613 - 838627 + T 80 -10 -3.65046 | TGAAGCATCCACTCA TCCAGC TAC GCTGGA TTCTTCGCCTAAGAA TERM 1226 839102 - 839116 + T 80 -10 -3.65046 | TGAAGCATCCACTCA TCCAGC TAC GCTGGA TTCTTCGCCTAAGAA Ctha_0713 839745 - 839302 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut TERM 1227 839737 - 839750 + g 73 -2.4 -5.14563 | opp_overlap 839737 TTTTTTACAATGAAT TCGA ATCATG TCGA TTTTTTGGTGAAACG TERM 1228 839799 - 839764 - R 71 -8.3 -3.53224 | overlap 839765 GATTTTTTGGTGAAA CGCCGCGCAACAAAC GCCCAG GTTTGCCACACGGCA AAAAGCGCTAAAGAA TERM 1229 839798 - 839765 - R 71 -9.6 -2.71791 | overlap 839764 ATTTTTTGGTGAAAC GCCGCGCAACAAAC GCCCAG GTTTGCCACACGGC AAAAAGCGCTAAAGA TERM 1230 839974 - 839958 - R 79 -8.7 -4.01603 | opp_overlap 839958 CAGTGAAAGACCAAA CGCACGT GAT ACATGCG TTTTCGGGTGTAGCC TERM 1231 839958 - 839974 + r 71 -6.5 -4.16943 | opp_overlap 839958 CAGTGAAAGACCAAA CGCACGT GAT ACATGCG TTTTCGGGTGTAGCC Ctha_0714 840388 - 840167 - | cold-shock DNA-binding domain protein TERM 1232 840872 - 840886 + G 72 -5.6 -4.4009 | AAGGCATGATGTATG TGGCGG GCG CGGCCA TTTTGTGGAGTACGG TERM 1233 841042 - 841057 + G 70 -4.7 -4.40123 | TTATTTGCCGCCGTT GCGTA TGCAGC TACGC TTATTCTTTTTGTTG TERM 1234 841145 - 841175 + G 73 -9.8 -3.30505 | overlap 841146 841148 TTTATGTTGGACTTT TTGGCTGGCTCTTT TTG AAAGAGCGAGTCAG CTTTTCTCATATCGT TERM 1235 841146 - 841174 + G 73 -11.1 -2.5758 | overlap 841145 841148 TTATGTTGGACTTTT TGGCTGGCTCTTT TTG AAAGAGCGAGTCA GCTTTTCTCATATCG TERM 1236 841148 - 841176 + G 75 -6.7 -4.52047 | overlap 841146 841145 ATGTTGGACTTTTTG GCTGGCTCTTTTT GAA AGAGCGAGTCAGC TTTTCTCATATCGTC Ctha_0715 840814 - 841743 + | protein of unknown function DUF6 transmembrane TERM 1237 842144 - 842116 - g 74 -3.3 -4.9181 | gap 1 AGAGAACATTAAAAA CCTCAATCAGCT CGAAAC AACT-ATTGAGG AAGGCGATGAGCTTT Ctha_0716 841913 - 843376 + | UBA/THIF-type NAD/FAD binding protein TERM 1238 843414 - 843430 + F 100 -8 -5.4505 | opp_overlap 843414 GTCGTTTCAAAAAAA GCAGCT TTTGT AGCTGC TTTTTTGTTACAACC TERM 1239 843430 - 843414 - f 100 -8 -5.40072 | opp_overlap 843414 GTCGTTTCAAAAAAA GCAGCT TTTGT AGCTGC TTTTTTGTTACAACC Ctha_0717 843590 - 844495 + | phenazine biosynthesis protein PhzF family TERM 1240 845360 - 845343 - g 95 -2 -6.11229 | gap 1, opp_overlap 845350, overlap 845345 AGCAAAAGAAAAAAA GTCCGCA TGTTT TGCG-AC ATACTTTCGCAACCC Ctha_0718 844505 - 845515 + | integrase family protein TERM 1241 845557 - 845537 - f 79 -6.9 -4.59853 | TTAATGCTTGAAAAA CCTCGAA GCGGACA TTCGAGG AGTATTACCGTTCAC Ctha_0719 845603 - 845932 + | hypothetical protein TERM 1242 845956 - 845973 + F 100 -11.3 -5.40072 | TGAATCAAGCATGTT GAGGGCT GAAA AGCCCTC TTTTTTTCCCAGAAA TERM 1243 846089 - 846103 + G 74 -3.5 -5.06414 | GGAAAATTCTTTTCA CGGTT TTTAC GACCG TTTTTCTTGCCGAAC Ctha_0720 846067 - 846339 + | protein of unknown function UPF0016 Ctha_0721 846500 - 847357 + | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Ctha_0722 847363 - 848133 + | geranylgeranylglyceryl phosphate synthase Ctha_0723 848368 - 848150 - | hypothetical protein Ctha_0724 850457 - 848385 - | hypothetical protein TERM 1244 848840 - 848826 - G 72 -6.4 -4.35524 | overlap 848828 GCGCCAAAGCCAAAA TCCACG CGG CGTGAA AAGCAACAGCTTAGG TERM 1245 849286 - 849308 + g 72 -4.8 -4.7254 | CGGCGCGTGTTTCGC TCGATGGC CGCGTGC GCCACCGA TTTTTCATCGCCGAT TERM 1246 849451 - 849462 + g 72 -3 -5.02476 | CTGGCCTCGCGCAAG GTTT GTTC AAAC TTTTTTGAAAGGTCT TERM 1247 850391 - 850411 + g 75 -3.1 -5.1101 | TACCCGGAAAACTGA CTTCCGACA TCA TGGCGGCGG TTTTTTCGCTCGTCC TERM 1248 850785 - 850822 + r 91 -7.1 -5.40072 | opp_overlap 850790, overlap 850786 850787 TCATTTGCTTGCATG ACGAAGTAGAGCCAA CTTTTACA TTGGCTCTACTTCCA TTTTTTTCAAAAGAA TERM 1249 850786 - 850821 + r 83 -10.6 -3.83561 | opp_overlap 850790, overlap 850785 850787 CATTTGCTTGCATGA CGAAGTAGAGCCAA CTTTTACA TTGGCTCTACTTCC ATTTTTTTCAAAAGA TERM 1250 850787 - 850820 + r 95 -14.1 -2.89655 | opp_overlap 850790, overlap 850786 850785 ATTTGCTTGCATGAC GAAGTAGAGCCAA CTTTTACA TTGGCTCTACTTC CATTTTTTTCAAAAG TERM 1251 850817 - 850790 - R 78 -10.7 -3.21099 | opp_overlap 850787 850786 850785 TGCTTGCATGACGAA GTAGAGCCAAC TTTTAC ATTGGCTCTAC TTCCATTTTTTTCAA Ctha_0725 852199 - 850925 - | hypothetical protein TERM 1252 851600 - 851616 + g 77 -3.7 -5.2696 | overlap 851612 GTAAATAGGAAGGGT TTGAAGC GCC GCTTGAA TTTTTTCAATTTTGG TERM 1253 852248 - 852231 - R 85 -2.7 -5.75342 | CGTGTTGAAAAAAAA TTGCTGA TCAA TCAGGAA AAAACCGCGGCCTGA Ctha_0726 853110 - 852376 - | chromosome segregation and condensation protein ScpA TERM 1254 852449 - 852464 + g 72 -9 -3.55444 | opp_overlap 852445 GTCACAATTGAGATT TGGCGA CTTC TCGCCA TTTCAAGAATCGCCA Ctha_0727 854262 - 853240 - | response regulator receiver protein Ctha_0728 856050 - 854326 - | integral membrane sensor signal transduction histidine kinase TERM 1255 855628 - 855618 - G 79 -8.2 -4.33997 | overlap 855615 TATCAAAAATAAGAA CCGC CTT GCGG TAAGAGGCAAATGTG Ctha_0729 857092 - 856154 - | domain of unknown function DUF1731 TERM 1256 856889 - 856904 + g 71 -3.9 -4.78149 | ATGAATCACCACATC CGTGC CTTCCA GCGCG TTTTTCCATTCTCCG TERM 1257 858585 - 858573 - g 72 -9.1 -3.54459 | TTAACGCCGCCCAAA CAGGC TGA GCCTG AAGGCAATCCGACCT Ctha_0730 857316 - 859238 + | DNA mismatch repair protein MutL TERM 1258 859346 - 859330 - f 72 -9.5 -2.73781 | overlap 859327 859343 CAGAAGGATAGAGCA GCAGTTT CCT AAACTGC GTGCCGGCAGTTCGA TERM 1259 860809 - 860796 - g 70 -2.3 -5.00884 | overlap 860798 860806 860807 ACGCGCTTGAAAAAA CAGGT GGAA ACCAG CTTCAAGCGGCAAAG Ctha_0731 859421 - 860914 + | two component, sigma54 specific, transcriptional regulator, Fis family Ctha_0732 861000 - 861359 + | methylated-DNA/protein-cysteine methyltransferase TERM 1260 861415 - 861381 - T 79 -9.4 -3.86822 | gap 1 GAATTTCCTGAGAAA GCATG-GATTCCGGC GTGTTG GCCGGAATAGCATGC AAATCATCAAGGGAT Ctha_0733 862210 - 861494 - | short-chain dehydrogenase/reductase SDR TERM 1261 862379 - 862416 + r 100 -16.5 -3.17392 | opp_overlap 862389 GGCCAGGTGGCTCGA TTCCCAAGAACTGGATT TAGC GATCCAGCTCTTGGGAA TTCAGTTAAAACGTG Ctha_0734 863357 - 862422 - | dihydroorotate dehydrogenase family protein Ctha_0735 863990 - 863394 - | hypothetical protein Ctha_0736 866040 - 863992 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1262 864671 - 864654 - G 72 -4.9 -4.64676 | gap 1 CCAGCGCGAAGAAAA TTTCG-GC ACG GCGCGAAA TGGATAAATCCTTTG Ctha_0737 867211 - 866060 - | hypothetical protein TERM 1263 867411 - 867392 - R 78 -10.8 -2.74461 | overlap 867391 867394 CACTGATTTTTAAAG CACTTCAC GCCC GTGAAGTG TGGCAGGTGATGTGG TERM 1264 867440 - 867467 + r 100 -13.6 -5.64006 | gap 1, opp_overlap 867445 GGGGGACACCTGCTA CGAAA-GGCGGTT CTA AACCGCCTTTTCG TTTTTTTACTTGACT TERM 1265 867461 - 867445 - R 90 -12.3 -3.73402 | opp_overlap 867440 ACACCTGCTACGAAA GGCGGTT CTA AACCGCC TTTTCGTTTTTTTAC TERM 1266 867622 - 867602 - R 100 -15.5 -3.53811 | opp_overlap 867602 GTTACTCTCTGTAAA GGCGACTGA GCT TCAGTCGCC TTTTTTTATTTACTG TERM 1267 867602 - 867622 + r 100 -15.5 -5.99154 | opp_overlap 867602 GTTACTCTCTGTAAA GGCGACTGA GCT TCAGTCGCC TTTTTTTATTTACTG Ctha_0738 868279 - 867632 - | hypothetical protein Ctha_0739 869215 - 868352 - | UspA domain protein TERM 1268 868724 - 868701 - G 79 -9 -4.03234 | opp_overlap 868718 TTTGCTCCATATAAA TCAGCAAATT TCTG AACTTGCTGA AAGTTTTCAGAAATT TERM 1269 869259 - 869249 - H 73 -4 -5.08824 | TCGTTAGTTAAAAAA CTTT AAA AAAG TATACGGCAAGAAAA TERM 1270 869536 - 869549 + G 88 -8.1 -4.7373 | GCCGATTAGCAGTTC TGCGC ATCT GCGCA TTTTTCCTGCCCTGC TERM 1271 869820 - 869834 + G 79 -8.6 -4.2679 | opp_overlap 869820 GCTCACTTTATATCA TCAGTG GTT CACTGA TTTTGCTCGCGCTTG TERM 1272 869894 - 869882 - g 100 -9.1 -5.41143 | TATCTTGTAAAAAAA CGCGA AGC TCGCG GCGAGAAAATGCTCT TERM 1273 870186 - 870201 + G 79 -3.2 -5.28481 | TTTCCGGCGTGATCG GCTATG CATC CATCGC TTTTTTGCTTGACTA Ctha_0740 869465 - 870316 + | undecaprenol kinase Ctha_0741 870352 - 870819 + | conserved hypothetical protein; putative signal peptide TERM 1274 870855 - 870878 + T 100 -10.3 -5.56568 | opp_overlap 870855 TGTAAAAATCAAAAA GCCGTGCGT TGATTC ATGCACGGC TTTTTTTGATCATCT TERM 1275 870878 - 870855 - T 100 -8.1 -5.18355 | opp_overlap 870855 TGTAAAAATCAAAAA GCCGTGCGT TGATTC ATGCACGGC TTTTTTTGATCATCT Ctha_0742 871925 - 870927 - | dihydroorotate dehydrogenase TERM 1276 872032 - 872000 - R 100 -12.8 -5.31456 | gap 1, overlap 872001 GTAAGGCATAAAAAA GTCTCCCCGAAC-GG TTGC CCTGTTCGGGGAGAA ATAAGATTTATTACA TERM 1277 872031 - 872001 - R 100 -16.3 -3.77789 | gap 1, overlap 872000 TAAGGCATAAAAAAG TCTCCCCGAAC-GG TTGC CCTGTTCGGGGAGA AATAAGATTTATTAC Ctha_0743 875656 - 872054 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein TERM 1278 873738 - 873751 + g 79 -8.1 -4.20084 | opp_overlap 873727 AAATCCGGCGCGTTG CCTGC AATA GCAGG TTTTAGCTCGATGGT TERM 1279 875314 - 875296 - G 89 -8.8 -4.55887 | overlap 875298 CGCCAAAAATAGAAA GCGCTTGC GCA GCAAGTGC ACGAGCCGATACATG TERM 1280 876373 - 876328 - R 100 -7.1 -6.06723 | gap 2 TTTTCGAAAAAAAAA GCGCGAAGTGACAAAACAGAT AACCAA ACCTGA-TT-TCACTTCGCGC AATTCGATTAGTTCT Ctha_0744 876977 - 876405 - | putative PAS/PAC sensor protein TERM 1281 876689 - 876699 + g 95 -2.4 -6.02345 | opp_overlap 876677 876691, overlap 876677 ACAGGCGATTCCAAA AGGC TTC GCCA TTTTTTTTATGATTG Ctha_0745 878103 - 877078 - | Radical SAM domain protein Ctha_0746 878459 - 879298 + | hypothetical protein TERM 1282 879380 - 879402 + F 90 -12.1 -3.50572 | TTTAGGAAATCATTT GGCGTTCAA CACTT TTGAACGCC TTCTATGCAATAGAT TERM 1283 879530 - 879516 - f 72 -8.6 -3.30903 | AAAATCCTTTTATAA GCTCTT GAT AAGAGC CTCTAAATCCGATTT TERM 1284 879962 - 879950 - g 72 -9.1 -3.50905 | overlap 879946 ATATCAGAAAAGATA GCCAC AAT GTGGC GGCAACCCGAGAAGA Ctha_0747 879550 - 880212 + | putative transcriptional regulator TERM 1285 880332 - 880280 - T 77 -9.2 -3.44146 | opp_overlap 880285, overlap 880285 880302 TGCCCTCAGAAGCAA CCGAACGGACATCATCAGGAAACA AATAA TTTTGCCCGATGATGCCCGTTTTG ATTTATTTCCATCGA TERM 1286 880285 - 880327 + T 84 -7.7 -4.72863 | opp_overlap 880285 880280 880302 TCAGAAGCAACCGAA CGGACATCATCAGGAAACA AATAA TTTTGCCCGATGATGCCCG TTTTGATTTATTTCC TERM 1287 880327 - 880285 - T 89 -12.1 -3.25356 | opp_overlap 880285, overlap 880280 880302 TCAGAAGCAACCGAA CGGACATCATCAGGAAACA AATAA TTTTGCCCGATGATGCCCG TTTTGATTTATTTCC Ctha_0748 881101 - 880415 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 1288 880732 - 880743 + g 71 -7.2 -4.11216 | CAGGCTTTGCGTCGG CGGC AATG GCCG TTTTGACGGTGCGAA TERM 1289 881066 - 881077 + g 89 -4.4 -5.78622 | opp_overlap 881066 TTCAACGCGGGTAAA TTCG TCGC CGAA TTTTTTTTCGAGTAA Ctha_0749 881687 - 882097 + | cytochrome c class I TERM 1290 882122 - 882140 + T 100 -12.4 -5.83211 | opp_overlap 882122 TAGGCTGAGTTAAAA GGCGGGAG CAA TTCCCGCC TTTTTTATTTTCGTC TERM 1291 882140 - 882122 - T 90 -11.7 -4.18494 | opp_overlap 882122 TAGGCTGAGTTAAAA GGCGGGA GCAAT TCCCGCC TTTTTTATTTTCGTC Ctha_0750 882552 - 882229 - | hypothetical protein Ctha_0751 883064 - 884158 + | peptidase M50 TERM 1292 884192 - 884230 + F 80 -9.8 -3.58905 | AACCACCTCATTGGT TTTTGTAAGGGCGG CCTGATATTTT CCGTCCTTACAAAA TTCTATCTCGCCCAT Ctha_0752 884512 - 885414 + | TPR repeat-containing protein TERM 1293 885487 - 885500 + F 71 -6.7 -4.17608 | GTTAATTTCGTGCGC GGAGT ATAG ACTCC TATTTTTTACCTCAG TERM 1294 885784 - 885772 - g 74 -6.9 -4.30576 | overlap 885774 GCTTCAGCAGCAAAA CCGGC ACA GCCAG CTGCCAAGCCAGCTC Ctha_0753 885541 - 885819 + | hypothetical protein TERM 1295 885871 - 885905 + F 70 -5.9 -4.21922 | gap 1, opp_overlap 885876, overlap 885873 885876 AAAAAGCATATTTTT TAA-AAGGGCAAGC ATAGATGG GCTTGCCCTTGTTG TTTCCTTTTCCCTAA TERM 1296 885873 - 885902 + F 79 -7.9 -4.21465 | opp_overlap 885876, overlap 885871 885876 AAAGCATATTTTTTA AAAGGGCAAGC ATAGATGG GCTTGCCCTTG TTGTTTCCTTTTCCC TERM 1297 885899 - 885876 - f 82 -9.6 -4.10657 | opp_overlap 885873 885871 885876 GCATATTTTTTAAAA GGGCAAGC ATAGATGG GCTTGCCC TTGTTGTTTCCTTTT TERM 1298 885876 - 885899 + F 82 -9.6 -4.19649 | opp_overlap 885876, overlap 885873 885871 GCATATTTTTTAAAA GGGCAAGC ATAGATGG GCTTGCCC TTGTTGTTTCCTTTT TERM 1299 887199 - 887187 - g 74 -3.4 -5.04249 | opp_overlap 887187 TTTTCAAAAAAGAAA CTGT CACGC ACAG TTATCCTTTCTCTTG TERM 1300 887728 - 887716 - g 82 -2.7 -5.45802 | overlap 887710 GTTCGAAAACAAAAA GCTTT TTG AAAAC GGCGGCTTTCCTGCC TERM 1301 888328 - 888356 + G 72 -8.9 -3.62522 | opp_overlap 888314 888313 888336, overlap 888332 888336 CGATAAACTTGCAGC CTATCAAACGCTG TAT CAGTGTTTGTTGG TTGTTAGCAAGCTTG TERM 1302 888332 - 888352 + G 79 -10.5 -3.53444 | opp_overlap 888313 888336, overlap 888328 888336 AAACTTGCAGCCTAT CAAACGCTG TAT CAGTGTTTG TTGGTTGTTAGCAAG TERM 1303 888336 - 888348 + G 72 -5.5 -4.39877 | opp_overlap 888336, overlap 888332 888328 TTGCAGCCTATCAAA CGCTG TAT CAGTG TTTGTTGGTTGTTAG Ctha_0754 886016 - 889252 + | isoleucyl-tRNA synthetase Ctha_0755 889289 - 889915 + | transcriptional regulator, TraR/DksA family TERM 1304 889926 - 889972 + T 84 -11.3 -3.81929 | opp_overlap 889932 CCTAAAGAAAAGGTT GTATAACAAGGAAAAAG AGCCTGCCCACAG CTTTTTCCTTGTTATAC TTTGATCGATTATTC Ctha_0756 891476 - 889998 - | amidophosphoribosyltransferase Ctha_0757 892449 - 891529 - | hypothetical protein TERM 1305 892212 - 892225 + g 73 -2.4 -5.24129 | TCAATGCGCGAGCCT GAAG CTTATC CTTC TTTTTTGTGCGAAGA Ctha_0758 893835 - 892600 - | transporter-associated region TERM 1306 894341 - 894319 - g 82 -7 -4.74801 | overlap 894320 GAATTGCAGCAAAAA CTCACAGCCA TCC CAGCTGTGAA AGAAACCAAATACAT Ctha_0759 894088 - 894954 + | protein of unknown function DUF214 TERM 1307 895652 - 895663 + G 71 -7.2 -4.10552 | overlap 895655 TCTCACTGCTGGGTC CCGG AAAT CCGG TTTCGTTTAATGAGC Ctha_0760 895090 - 896232 + | hypothetical protein Ctha_0761 896222 - 897007 + | hypothetical protein TERM 1308 897063 - 897026 - f 100 -15.7 -3.18274 | opp_overlap 897027 897032, overlap 897032 CCCACCTGAATTGAA GCAAAAGCGCCCATGAG TTCT CTCATCGGCGCTTTTGT TTATGCTCTTTTTGA TERM 1309 897027 - 897062 + F 100 -19.2 -4.16121 | opp_overlap 897026 897032, overlap 897032 CCACCTGAATTGAAG CAAAAGCGCCCATGAG TTCT CTCATCGGCGCTTTTG TTTATGCTCTTTTTG TERM 1310 897057 - 897032 - f 100 -13.3 -4.45664 | opp_overlap 897027 897032, overlap 897026 TGAATTGAAGCAAAA GCGCCCATGAG TTCT CTCATCGGCGC TTTTGTTTATGCTCT TERM 1311 897032 - 897057 + F 100 -13.3 -5.03227 | opp_overlap 897032 897026, overlap 897027 TGAATTGAAGCAAAA GCGCCCATGAG TTCT CTCATCGGCGC TTTTGTTTATGCTCT TERM 1312 898076 - 898066 - g 89 -5.4 -5.76633 | TCACACAGAAAAAAA CTCA GTC TGAG CCATTTGCCTTTATT TERM 1313 898731 - 898702 - g 71 -10.1 -3.24488 | overlap 898716 TGCTTGCAAATAAAG GCCTCTCAACAAA AGCT TCTGCTGAGAAGC AAACTATGTGAATCT TERM 1314 898731 - 898716 - g 82 -7.6 -4.63218 | overlap 898702 GGCCTCTCAACAAAA GCTTCT GCTG AGAAGC AAACTATGTGAATCT Ctha_0762 897204 - 898742 + | Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5 6-dimethylbenzimidazole phosphoribosyltransferase)-like protein TERM 1315 898760 - 898795 + F 100 -13.4 -4.41348 | opp_overlap 898765, overlap 898765 CTAAGTTATTAAATA TGAAAGCGCCCATGAG TTCT CTCATCGGCGCTTTTG TTTGTTTACACGCCG TERM 1316 898765 - 898790 + F 100 -13.3 -5.18866 | opp_overlap 898765, overlap 898760 TTATTAAATATGAAA GCGCCCATGAG TTCT CTCATCGGCGC TTTTGTTTGTTTACA TERM 1317 898790 - 898765 - f 100 -13.3 -4.02719 | opp_overlap 898765 898760 TTATTAAATATGAAA GCGCCCATGAG TTCT CTCATCGGCGC TTTTGTTTGTTTACA TERM 1318 899140 - 899150 + G 71 -6.8 -4.08692 | opp_overlap 899140 899139 899135 TGTAGTGAAACAAAT GCTC AAC GAGC TTTTAGAGGAACTTC Ctha_0763 898853 - 899785 + | domain of unknown function DUF1730 TERM 1319 901500 - 901488 - g 86 -4.1 -5.63103 | opp_overlap 901490, overlap 901490 GCCGAAGCAAAAAAA TTCCG CGA CGAAA TGGCGGTTCATCATT Ctha_0764 899871 - 901544 + | CTP synthase TERM 1320 903620 - 903610 - T 71 -4 -4.93296 | TCATGAGTAGAAAAA TCAA AAA TTGA AAAAGAAGCTAAAAT TERM 1321 903695 - 903714 + T 91 -10.8 -4.80882 | opp_overlap 903695 GTTCGAATGCAAAAA GCCTATCA TTTC TGATAGGC TTTTTGATATAAAAT TERM 1322 903714 - 903695 - T 91 -10.8 -4.74103 | opp_overlap 903695 GTTCGAATGCAAAAA GCCTATCA TTTC TGATAGGC TTTTTGATATAAAAT TERM 1323 906927 - 906913 - T 70 -2.8 -5.10461 | overlap 906918 906919 TTGATTCAATAAAAA CAAAAC CAA GCTTCG TGGAGCTTAACGGAT TERM 1324 906930 - 906918 - T 78 -3.3 -5.42605 | overlap 906913 906919 TCAATAAAAACAAAA CCAAG CTT CGTGG AGCTTAACGGATTCG TERM 1325 907068 - 907038 - T 75 -8.4 -3.86194 | opp_overlap 907041, overlap 907025 907022 907041 AATTTTCTGGACAAA CCAGCAAACTGCAA TCT TTACAATTTGCTTG TGGGCCTGAGTGGAT TERM 1326 908331 - 908345 + T 71 -4.2 -4.72029 | ATAAGGTACCGTCAG TCTCAC CAA GCGAGA TTTTCTTCCCTTACA Ctha_0766 911164 - 909896 - | WD-40 repeat protein TERM 1327 910000 - 909985 - G 71 -6.8 -4.10552 | gap 1, opp_overlap 909997, overlap 909963 CTTTAGTAAAGCAAA GC-CGCG TAA CGCGCGC CTCATGCGCTTTAAT TERM 1328 910144 - 910154 + g 89 -4.6 -5.78622 | GGTCGGGCAAGCTTT CGCG TAT CGTG TTTTTTTTCACCTGG TERM 1329 910374 - 910357 - G 70 -2 -5.09225 | overlap 910359 AGGCCATTGAAAAAA TAGGAA ACGCCG TTCCCA TCATGGTTCGCACAG TERM 1330 912093 - 912124 + G 74 -7.2 -4.35524 | opp_overlap 912099 GTTACGACTATCTGC TGAAAAGCCACGCG CTAA CGCTGGGCGTTTCA TTTTAACTTTAAAGA Ctha_0767 911411 - 912130 + | hypothetical protein TERM 1331 912396 - 912384 - g 80 -6.3 -4.85599 | CGCAGGTTAGAAAAA TCATC GAT GATGA AGCCGGTGAAACTAT Ctha_0768 912155 - 912421 + | hypothetical protein Ctha_0769 912428 - 913207 + | beta-lactamase domain protein Ctha_0770 914547 - 913261 - | phosphoribosylamine/glycine ligase TERM 1332 913533 - 913556 + g 73 -11 -2.7264 | overlap 913532 CTGGATAGCCATTGC TGGCCATCAC CACG GTGGTGGCCG ATTTGGGAAGCATTT Ctha_0771 917503 - 914579 - | glycoside hydrolase family 57 TERM 1333 915279 - 915261 - G 87 -11 -3.87641 | overlap 915250 AATAGCGCGGAGAAA TCAACGCC TGC GGCGTCGA GCGCCAAAAAGAGAT TERM 1334 915810 - 915795 - G 80 -6 -5.00616 | overlap 915797 TCGTCGCCCAAAAAA CGCGCG ATGC CGCCCG TAGCGAGCATCCCAA TERM 1335 916250 - 916263 + g 70 -2.3 -5.02074 | opp_overlap 916249 ATTTCCAAATATGAC AACCG ACGA CGGTG TTTTTTGAGCAATCG TERM 1336 917609 - 917592 - R 76 -2.7 -5.40072 | overlap 917593 TTTGCTGCAAAAAAA CTCGCTA AATA TAACGAA TTCATTTTTAGAAGT Ctha_0772 918145 - 917657 - | protein of unknown function DUF456 Ctha_0773 919496 - 918345 - | ribosome small subunit-dependent GTPase A TERM 1337 919271 - 919251 - G 79 -2.6 -5.35815 | gap 1, opp_overlap 919252, overlap 919252 GATAGCAAACAAAAA CTTGCCAGA GAGT TC-GGCAAA TATTTCATGCTGGCC TERM 1338 919356 - 919342 - G 72 -2.8 -5.0916 | opp_overlap 919342 CTGGCAACAGAAAAA TCATCT GTA AGAAGA TTTTCACTTTGTCGC TERM 1339 919452 - 919441 - G 72 -3 -5.055 | TGAAGGTCTAAAAAA TTCT CGTC AGAA ATAGCTTTTATATTT TERM 1340 919988 - 920001 + G 72 -5.2 -4.66535 | opp_overlap 919988, overlap 919976 919976 CCTTGCGCAAATTGA GCGC GTTTTG GCGC TTTGTTTTGCGCATT TERM 1341 920112 - 920135 + G 72 -8.2 -3.72576 | AGTTCGCCCGTGAAT CGGTTGAGTC TTGG GATTCAATCG TTTGATGCGGGAAAG Ctha_0774 919776 - 920906 + | oxygen-independent coproporphyrinogen III oxidase TERM 1342 922796 - 922785 - g 80 -7.2 -4.6313 | opp_overlap 922784, overlap 922787 CGCAAAACAAAATAA CGCC GCGC GGCG ATCTGATTACAAGCG TERM 1343 923464 - 923440 - g 71 -7.2 -4.0896 | gap 1 AAACCTCGGCGAAAA CAGCAA-AGCG CGCG CGCTGTTGCCG GAACTTCAGGAAAAA Ctha_0775 920966 - 923725 + | hypothetical protein TERM 1344 923961 - 923937 - g 72 -9.3 -3.53012 | opp_overlap 923926, overlap 923953 GGTGCTTGGTGCAAA GCCGCAAGATT TGA AATTTCGCGGC GAAAAAACTTATGTA Ctha_0776 923722 - 924528 + | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TERM 1345 924571 - 924546 - f 78 -10.5 -3.06796 | opp_overlap 924546, overlap 924548 924550 924552 TTTCATTTTAGTTAA TAGAGACGCGA ATTT TTGCGTCTCTA TTTGTTTACGTTCGG TERM 1346 924546 - 924571 + F 100 -12.7 -4.50159 | opp_overlap 924546 924548 924550 924552 TTTCATTTTAGTTAA TAGAGACGCGA ATTT TTGCGTCTCTA TTTGTTTACGTTCGG TERM 1347 924569 - 924548 - f 70 -8.7 -3.09327 | opp_overlap 924546, overlap 924546 924550 924552 TCATTTTAGTTAATA GAGACGCGA ATTT TTGCGTCTC TATTTGTTTACGTTC TERM 1348 925141 - 925170 + G 72 -5.7 -4.4891 | gap 1, overlap 925127 925126 925142 GGCGCTCGGCGAAGC GCGTTTCGGCGCGG GCA CTGCGCT-AAACGA TTTTATCATGATCAC Ctha_0777 924761 - 925723 + | ROK family protein Ctha_0778 925749 - 926381 + | putative restriction endonuclease TERM 1349 926669 - 926659 - g 78 -5.4 -4.74013 | CCCAAAGACACAAAA TCCA AGC TGGA CACACGGCTTTTTGA TERM 1350 926774 - 926740 - g 79 -10.6 -3.59979 | opp_overlap 926740 926741, overlap 926741 CTGCGCCATCTGAAA CCGCACGGCGAACTGA TTT TCATCACGCCGCGCGA TTTTCTCAAGGCGAC TERM 1351 926773 - 926741 - g 76 -11.9 -2.75844 | opp_overlap 926741 926740, overlap 926740 TGCGCCATCTGAAAC CGCACGGCGAACTGA TTT TCATCACGCCGCGCG ATTTTCTCAAGGCGA TERM 1352 927060 - 927082 + G 78 -6.3 -4.56597 | gap 1, overlap 927068 TTTTGTGAAAGTCGG CGCGGT-GAG CGGT CTTGACCGCG TTTTTACAAGCGAGG TERM 1353 927452 - 927465 + G 72 -3.1 -5.04249 | CGGAACTTGGCTTCA TTTGC GACG GCAGA TTTCTTTTTTCCCAA Ctha_0779 926374 - 927552 + | site specific DNA-methyltransferase TERM 1354 927537 - 927547 + T 73 -8.2 -3.55622 | overlap 927529 GTTCTCGCGCGAAGG CCGC TTG GCGG TTTGAGCACATTGGC Ctha_0780 928483 - 927593 - | transcriptional regulator, AraC family Ctha_0781 929447 - 928701 - | short-chain dehydrogenase/reductase SDR TERM 1355 929265 - 929285 + g 81 -5.3 -5.16151 | overlap 929267 CGTTACATCGGTCGT GACCGCCAA GGC TTGGCCGCC TTTTTCTTGAATTTC Ctha_0782 931023 - 930118 - | hypothetical protein TERM 1356 930545 - 930563 + g 73 -2.4 -5.14563 | overlap 930543 930546 TCACCAGCGAATCCG GTTGCATC GTT GATGTAAA TTTTTTCATAGAGCA TERM 1357 930731 - 930743 + g 74 -3.3 -5.055 | opp_overlap 930732, overlap 930732 AGCCAGTAAAGCGAA ATGCC AAC GGCAC TTTTTTCACCGTTGA TERM 1358 931135 - 931171 + r 100 -8 -5.33331 | opp_overlap 931145, overlap 931145 TTATGAACGGGGCTG GCAATAAAAAGGGGGC TGTTT GCCCCCAGTTTATTTC TTTTTGTTGTCTTTG TERM 1359 931161 - 931145 - R 93 -10.8 -5.06414 | opp_overlap 931135 931145 GGCTGGCAATAAAAA GGGGGC TGTTT GCCCCC AGTTTATTTCTTTTT TERM 1360 931145 - 931161 + r 78 -10.8 -2.70228 | opp_overlap 931145, overlap 931135 GGCTGGCAATAAAAA GGGGGC TGTTT GCCCCC AGTTTATTTCTTTTT Ctha_0783 931959 - 931165 - | Rhomboid family protein Ctha_0784 933274 - 932081 - | Phosphoglycerate kinase TERM 1361 932495 - 932508 + g 70 -5.3 -4.4874 | opp_overlap 932495, overlap 932489 932488 GGTTGGCAACAAGAA CTTCA CACC TGAAG TTTTCGCTTTTTCCA TERM 1362 932957 - 932972 + g 76 -9 -3.74526 | CACGTCACCGGCTTT CATGGC TGCA GCCATG TTCTTGACTTCATCA Ctha_0785 935381 - 933306 - | hypothetical protein TERM 1363 934698 - 934681 - G 70 -4.7 -4.4261 | TCGCTAAGATGAAAA GACGCTG CGGC CTGCGCC GGAATAGAGCCATCC TERM 1364 935479 - 935491 + G 82 -6.9 -4.87893 | CAAAGGGCATCTTTT CGGCG GCG CGCTG TTTTTCATTCCGCTT Ctha_0786 935453 - 935929 + | membrane-bound metal-dependent hydrolase TERM 1365 937369 - 937322 - g 79 -12.1 -3.18264 | overlap 937336 TCGGGCATTTATCAA GCGCTTGAGGCAAACTTGTCG GTCAAG CGAGAAGTTCGCCTAAAGTGC AAAGACGGCTCCGCC TERM 1366 937488 - 937475 - g 76 -2.3 -5.27938 | ATTTCGAAACAAAAA TCCGC AGCC GCGCA ACTTCAAGAGCAAAA TERM 1367 939644 - 939627 - g 72 -2.7 -5.04325 | overlap 939628 GCGAAAGCACAAAAA TTGAACT GGCC AGTTCAT TGAAAATTTCTGGGT Ctha_0787 936371 - 939742 + | PAS/PAC sensor hybrid histidine kinase TERM 1368 939840 - 939866 + G 72 -5 -4.56597 | CCATGCAGCTTTATC TTGACGGCGGCG GCT CGTCGCTGAAAA TTTTTCAAAAAAAGC Ctha_0788 939827 - 940624 + | ATPase BadF/BadG/BcrA/BcrD type TERM 1369 940658 - 940698 + T 100 -13.6 -3.39142 | gap 1, opp_overlap 940662 940663 940669, overlap 940661 940662 940663 940669 TTTCTATCATTGCGC CAAA-TGAAAAAGGCGACT ACCG GGTCGCCTTTTTCGGTTTG TTGCTTAAATCTCAG TERM 1370 940661 - 940694 + T 88 -11.1 -4.33621 | opp_overlap 940662 940663 940669, overlap 940658 940662 940663 940669 CTATCATTGCGCCAA ATGAAAAAGGCGACT ACCG GGTCGCCTTTTTCGG TTTGTTGCTTAAATC TERM 1371 940662 - 940693 + T 95 -14.6 -3.1945 | opp_overlap 940662 940663 940669, overlap 940661 940658 940663 940669 TATCATTGCGCCAAA TGAAAAAGGCGACT ACCG GGTCGCCTTTTTCG GTTTGTTGCTTAAAT TERM 1372 940693 - 940662 - T 85 -11.7 -3.54741 | opp_overlap 940661 940658 940662 940663 940669, overlap 940663 940669 TATCATTGCGCCAAA TGAAAAAGGCGAC TACCGG GTCGCCTTTTTCG GTTTGTTGCTTAAAT TERM 1373 940663 - 940692 + T 100 -15.9 -2.50947 | opp_overlap 940662 940663 940669, overlap 940662 940661 940658 940669 ATCATTGCGCCAAAT GAAAAAGGCGACT ACCG GGTCGCCTTTTTC GGTTTGTTGCTTAAA TERM 1374 940692 - 940663 - T 100 -15.2 -2.7263 | opp_overlap 940663 940662 940661 940658 940669, overlap 940662 940669 ATCATTGCGCCAAAT GAAAAAGGCGAC TACCGG GTCGCCTTTTTC GGTTTGTTGCTTAAA TERM 1375 940686 - 940669 - T 90 -8.4 -4.98531 | opp_overlap 940663 940662 940661 940658 940669, overlap 940663 940662 GCGCCAAATGAAAAA GGCGAC TACCGG GTCGCC TTTTTCGGTTTGTTG TERM 1376 940669 - 940686 + T 91 -9.1 -4.86939 | opp_overlap 940669 940663 940662, overlap 940663 940662 940661 940658 GCGCCAAATGAAAAA GGCGACT ACCG GGTCGCC TTTTTCGGTTTGTTG Ctha_0789 941896 - 940730 - | iron-containing alcohol dehydrogenase Ctha_0790 942960 - 941959 - | aldo/keto reductase TERM 1377 942177 - 942165 - G 72 -9.1 -3.47896 | opp_overlap 942176 CAAGCAACCAAGCAA GCGCA ATT TGCGC CGGTGTGGCCTGTTT TERM 1378 942948 - 942959 + g 73 -2.2 -5.14163 | TGCTATTTCCCAGTT TGCG CTTT TGCA TTTTTATTCCTCCAT Ctha_0791 943952 - 943053 - | transcriptional regulator, AraC family Ctha_0792 945365 - 943998 - | hypothetical protein TERM 1379 944393 - 944403 + g 73 -2.4 -5.20328 | opp_overlap 944393 TTTTTTCCACCAACA CGCG CCC CGCA TTTGTTTTTTTCAGC TERM 1380 945214 - 945230 + g 88 -3.7 -5.75342 | overlap 945197 945216 CCGGCCACTTCGTCG GCGTATT CCA AATACAC TTTTTTTTGAGAAGA TERM 1381 946564 - 946549 - g 78 -4.7 -5.04356 | overlap 946542 946562 TCAAAGAAGGAAAAA TCCCA GAAAAA TGGGA CGGAAGAACCGCCGA Ctha_0793 945519 - 946622 + | UDP-N-acetylglucosamine 2-epimerase TERM 1382 946644 - 946674 + F 81 -5.5 -5.22289 | opp_overlap 946645 946647, overlap 946645 946647 CTTTGCATCCAAAAA AG-AGGAGCGAGTCT GAA AG-CTCGCTCCTGCA TTTTTATATTTCCTC TERM 1383 946645 - 946673 + F 76 -9 -3.71747 | opp_overlap 946645 946647, overlap 946644 946647 TTTGCATCCAAAAAA G-AGGAGCGAGTCT GAA AG-CTCGCTCCTGC ATTTTTATATTTCCT TERM 1384 946672 - 946645 - f 91 -9.2 -5.08824 | gap 1, opp_overlap 946644 946645 946647, overlap 946647 TTTGCATCCAAAAAA GAGGAGCGAGTCT GAA AG-CTCGCTCCTG CATTTTTATATTTCC TERM 1385 946670 - 946647 - f 90 -11.8 -4.17608 | gap 1, opp_overlap 946645 946644 946647, overlap 946645 TGCATCCAAAAAAGA GGAGCGAGTCT GAA AG-CTCGCTCC TGCATTTTTATATTT TERM 1386 946647 - 946670 + F 82 -11.8 -2.93365 | gap 1, opp_overlap 946647 946645, overlap 946645 946644 TGCATCCAAAAAAGA GGAGCGAGTCT GAA AG-CTCGCTCC TGCATTTTTATATTT TERM 1387 947507 - 947493 - g 70 -5 -4.42238 | overlap 947500 GGACTGCAATCAAAA GAAAAC GCG GCTTTC CCTAACCGTTGAGCC Ctha_0794 946876 - 947676 + | hypothetical protein TERM 1388 947704 - 947732 + T 80 -6 -5.06414 | opp_overlap 947709, overlap 947709 AATGGCATTCTAATA AAAAATGGAGGG ACGCG CCCTCCATTTAA TTTTTCTTGCCGCGA TERM 1389 947727 - 947709 - T 100 -10.3 -5.46657 | opp_overlap 947704 947709 CATTCTAATAAAAAA TGGAGGG ACGCG CCCTCCA TTTAATTTTTCTTGC TERM 1390 947709 - 947727 + T 89 -10.3 -4.43037 | opp_overlap 947709, overlap 947704 CATTCTAATAAAAAA TGGAGGG ACGCG CCCTCCA TTTAATTTTTCTTGC Ctha_0795 950529 - 947761 - | Phosphoenolpyruvate carboxylase TERM 1391 947847 - 947859 + g 71 -6.9 -4.1466 | CATCCTGTTCCCTGC CGGTG TTG CGCCG TTTTCGCCATTCCGT TERM 1392 948428 - 948391 - G 72 -5.5 -4.54301 | gap 1, opp_overlap 948391, overlap 948392 GAAAAAATCAATAAA GCC-GTCGGTGTTCAAGA GTT CCGTGTACACCGAAAGGC TTTTTTCTGCCAGCT TERM 1393 948391 - 948428 + g 81 -4.8 -5.24531 | gap 1, opp_overlap 948391 948392 GAAAAAATCAATAAA GCC-GTCGGTGTTCAAG AGTTC CGTGTACACCGAAAGGC TTTTTTCTGCCAGCT TERM 1394 949440 - 949452 + g 84 -4.7 -5.31275 | opp_overlap 949434, overlap 949434 ACTGCAAATCGGCAA GCAGC TCG GCGGC TTTTTTGTAATGAAA TERM 1395 950279 - 950302 + g 82 -7.5 -4.64334 | gap 1 AGCTCGGTTTCCAAC TGCCGCCGAT ACTGA ATCG-CGGCA TTTTGTTCGGCCATT TERM 1396 950560 - 950548 - H 70 -4.9 -4.59853 | CTAACTCCTTAAAAA TATGA ATT TCATA ACTTATAACCGTTAA TERM 1397 952006 - 952022 + G 71 -3.5 -4.81249 | overlap 951992 ATCCGGAAGGCGCGC GCCACCC AAT GTGCGGC TTTTTGGATTTGGAA Ctha_0796 950967 - 952322 + | cobyrinic acid a,c-diamide synthase TERM 1398 952398 - 952427 + F 100 -14.4 -4.49353 | AACGCCGATTGATTT GTAAGGGCGAAC CGATGC GTTCGCCCTTGC TTTGTTATCTTCTCC TERM 1399 953011 - 953039 + G 79 -9.5 -3.75153 | TTTAGACACGGTTAG GCGCTTGGAAGGC TGT GGCATTCAAGCGC TTTCCATTCACGGAC Ctha_0797 952412 - 953620 + | TIM-barrel protein, nifR3 family TERM 1400 954839 - 954854 + G 72 -8.2 -3.78775 | opp_overlap 954838 CGCAGCCAAAAAGCT GCTGGC TGAA GCCGGC TTTCCTGATGGAAAA TERM 1401 954881 - 954870 - g 71 -7.2 -4.18018 | TTTCCTGATGGAAAA GGGC TTGC GCCC ATCACGCTGAATACG TERM 1402 955070 - 955082 + G 71 -3.4 -4.83759 | GGGCGCAGATTATCC CGAT CCAGA ATCG TTTTTGAATTTGGTT Ctha_0798 953637 - 955382 + | extracellular solute-binding protein family 5 TERM 1403 955478 - 955494 + T 100 -13.7 -3.87149 | opp_overlap 955478 ATTCAGAAAAAAAAA GCGGGGA AAA TCCCCGC TTTGCATTTGATGAA TERM 1404 955494 - 955478 - T 100 -13.7 -6.24157 | opp_overlap 955478 ATTCAGAAAAAAAAA GCGGGGA AAA TCCCCGC TTTGCATTTGATGAA Ctha_0799 958189 - 955535 - | hypothetical protein TERM 1405 955586 - 955568 - G 78 -12.4 -2.60244 | overlap 955524 955565 955564 TTGGTAACGAACCGA CGCGACGA CGT CCGTCGCG CTATCAATGCCAGCA Ctha_0800 958561 - 958226 - | Tetratricopeptide TPR_2 repeat protein Ctha_0801 959031 - 958648 - | histidine triad (HIT) protein Ctha_0802 960134 - 959190 - | diguanylate cyclase TERM 1406 959820 - 959805 - G 75 -3.2 -5.252 | overlap 959807 GATGCTTATAAAAAA CATGCC AAGT GGCATC CCATAATCCTCAATA TERM 1407 960602 - 960659 + G 72 -8.5 -3.66999 | gap 1, opp_overlap 960599 960601 960602 960610 960639, overlap 960603 GTGCATCAGGAAGAG TGCAAGCATTTGCATCGCACGG-TTGAT TTT ATCAAATCTTGCGGCGCAAAGGCTGGCG TTTCGCTCAATCCGT Ctha_0803 960311 - 960976 + | Ribulose-phosphate 3-epimerase Ctha_0804 963165 - 960973 - | hypothetical protein TERM 1408 961536 - 961571 + g 74 -5.4 -4.56597 | opp_overlap 961531 CCTCAGCAAACGCAT TTTGCGGCGAGCCAAA CCCA TTTGCCGCGCCATAAA TTTTTGCCGCAAGCA TERM 1409 961969 - 961918 - G 73 -4.6 -4.8622 | gap 3 TTTCTCAAGCAAAAA TTGGACGAG-C-GAGCCC-ATCAGC GTGTA GCTCATCGAGCCCAGTCCCGTCCAA AAACCAAACGCGCCA TERM 1410 962246 - 962260 + g 74 -5.6 -4.72272 | AACTCGGTTTGGTCA GCGCCT GTG AAGCGC TTTTTGGTGGCAGAA TERM 1411 962911 - 962901 - G 87 -6.8 -5.2696 | CCAAAATGTAAAAAA CGAG CCC CTCG AAATAATCGCAATTG TERM 1412 963299 - 963275 - R 73 -3.6 -5.14563 | CGTCTGAGGAAAAAA TAGCCCTCAA TATGT TTGAAGTCTA TCGCTCATTATCAAA Ctha_0805 964442 - 963297 - | filamentation induced by cAMP protein Fic Ctha_0806 966259 - 964808 - | tRNA modification GTPase TrmE TERM 1413 965723 - 965701 - G 95 -13.4 -4.12599 | AACAAGCGTTTAAAA GCTCGGTTCG TAG CGAGCCGAGC TTCAGGGATAGGTCG TERM 1414 966359 - 966370 + r 84 -5.8 -5.26119 | opp_overlap 966326, overlap 966351 GCCGATTTTTGCGAT GCGA ATCT TCGC TTTTGTTTTTCAGAA Ctha_0807 966891 - 966424 - | 6,7-dimethyl-8-ribityllumazine synthase Ctha_0808 967553 - 966921 - | phosphoheptose isomerase Ctha_0809 969069 - 967672 - | AAA ATPase TERM 1415 968487 - 968474 - G 70 -2.4 -5.00616 | TGGGCGCTGAAAAAA TACG GGCTGT CGTA AGCCGCCTCAAAAAG TERM 1416 969781 - 969768 - g 78 -5.9 -4.78753 | TCAAGATGAAGAAAA GCGCA TTTT CGCGC CCATCACAATTGCCG Ctha_0810 969337 - 970485 + | geranylgeranyl reductase TERM 1417 970574 - 970540 - T 100 -15.1 -4.86385 | opp_overlap 970539 970538 970544, overlap 970544 ACTGGGAAAAACAAA CAAAGCCGCTCCGCC AAAAA AACGGAACGGCTTTG ACTTTTCCTGACCAA TERM 1418 970570 - 970544 - T 93 -10.1 -4.94811 | opp_overlap 970539 970538 970544, overlap 970540 GGAAAAACAAACAAA GCCGCTCCGCC AAAAA AACGGAACGGC TTTGACTTTTCCTGA Ctha_0811 972280 - 970628 - | magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase TERM 1419 971257 - 971270 + g 72 -8.1 -3.81755 | overlap 971258 TCACGAACTGCGCTT CGGCA ACGA TGCCG TTGTCTTTCAGCAAT Ctha_0812 972990 - 972520 - | hypothetical protein Ctha_0813 974223 - 973249 - | WD-40 repeat protein TERM 1420 973725 - 973707 - G 71 -9.6 -3.27525 | opp_overlap 973706 973704 973702, overlap 973702 CGGCGCTAAAGCTAA CCGCTTCA ATG TAAAGCGG ATGTCCTTTTTTGAT TERM 1421 974406 - 974387 - R 79 -5 -5.26119 | overlap 974390 CGCTGAAAAACAAAA TAAGCCTT CAGC AAGGCTAA ACTAACAATGCAAAT TERM 1422 974403 - 974390 - R 79 -6.7 -4.70511 | overlap 974387 TGAAAAACAAAATAA GCCTT CAGC AAGGC TAAACTAACAATGCA Ctha_0814 974689 - 974408 - | hypothetical protein TERM 1423 974452 - 974464 + g 70 -4.7 -4.5187 | opp_overlap 974452 GGGAGAAAAGACTAA GCCGG CTG CCCGC TTTACTTTTTTTGCA TERM 1424 974683 - 974659 - G 78 -4.9 -5.06414 | opp_overlap 974645, overlap 974660 974661 TGCTTTCAAGAAAAA GCTGGTTAGGG AAT CCCTCACCAAA AATCATAAAAAACCC TERM 1425 975549 - 975559 + G 82 -3.2 -5.47821 | AGGCAAAACGGTTTT TCTG GAG CGGA TTTTTTTCCCTGAGT Ctha_0815 974782 - 975597 + | metallophosphoesterase Ctha_0816 976159 - 975629 - | hypothetical protein TERM 1426 976822 - 976798 - g 70 -5 -4.52345 | ACATCACGAAAGAAA CCATCGACAA ATTGA TTGGCAATGG CAAAAAACTTATCGT TERM 1427 977922 - 977901 - g 74 -5.7 -4.5852 | overlap 977895 GAACTTAAAGCAAAA GCTGAAGCG CTTG CGCGGCAGC GCGGCTTGCAAGAAG Ctha_0817 976560 - 977969 + | chlorophyllide reductase subunit Z TERM 1428 978037 - 978015 - T 86 -9.9 -4.20084 | gap 1, opp_overlap 978011 978015 ACTATTTATGGAAAA GGGCAGCTCT AAAA AG-GCTGCCC TTGCTTTTCGAATAA TERM 1429 978015 - 978037 + T 80 -9.9 -3.68366 | gap 1, opp_overlap 978015, overlap 978011 ACTATTTATGGAAAA GGGCAGCTCT AAAA AG-GCTGCCC TTGCTTTTCGAATAA Ctha_0818 978333 - 978121 - | hypothetical protein TERM 1430 978388 - 978373 - H 71 -4 -4.94902 | GAATGAGGATAAAAA TGAGCT GCTA AACTCA AAAAAAAACGCATCA Ctha_0819 978540 - 978857 + | hypothetical protein TERM 1431 978903 - 978934 + T 84 -5.9 -5.2696 | opp_overlap 978910, overlap 978904 978915 TTGAAAAGTTTATTT CAAAAAAGGCGTG GCGTGG CACGCCTTTTTGC TTTTTTCACTTTTGG TERM 1432 978904 - 978933 + T 79 -9.4 -3.74549 | opp_overlap 978910, overlap 978903 978915 TGAAAAGTTTATTTC AAAAAAGGCGTG GCGTGG CACGCCTTTTTG CTTTTTTCACTTTTG TERM 1433 978927 - 978910 - T 91 -8.4 -5.0538 | opp_overlap 978904 978903 978915 GTTTATTTCAAAAAA GGCGTG GCGTGG CACGCC TTTTTGCTTTTTTCA TERM 1434 978915 - 978927 + T 100 -9.1 -5.25735 | opp_overlap 978910, overlap 978904 978903 TTTCAAAAAAGGCGT GGCGT GGC ACGCC TTTTTGCTTTTTTCA Ctha_0820 979872 - 978955 - | ABC transporter-related protein Ctha_0821 980966 - 979890 - | aminodeoxychorismate lyase TERM 1435 980702 - 980678 - G 72 -9.3 -3.59979 | gap 1, opp_overlap 980679 GCTCTGCACTGGAAA GGCCGG-ACG GAATAT CGTACCGGCC AGGCTTGATATTTTG Ctha_0822 981362 - 981009 - | Chorismate mutase Ctha_0823 982179 - 981460 - | hydrolase (HAD superfamily)-like protein Ctha_0824 982711 - 982202 - | hypothetical protein Ctha_0825 983199 - 984164 + | S-adenosyl-methyltransferase MraW Ctha_0826 984182 - 984688 + | hypothetical protein TERM 1436 984743 - 984733 - g 75 -3.2 -5.12068 | overlap 984740 CAGAGCGAACAAAAA CGAG AGA CTCA GGCTAACCGAGAAAA TERM 1437 986348 - 986362 + G 74 -3.4 -5.09173 | GCTATTATGGCAGTA CGGTTG CCG CGCCCG TTTTTTCAAATATTG TERM 1438 986820 - 986810 - g 77 -6.8 -4.37886 | opp_overlap 986809 CGACTGTGGATAAAA GCAC GGA GTGC ATCCTTAGAATGAGC Ctha_0827 984691 - 986841 + | Peptidoglycan glycosyltransferase Ctha_0828 986865 - 988370 + | UDP-N-acetylmuramyl-tripeptide synthetase TERM 1439 989756 - 989777 + G 93 -10.1 -4.58395 | opp_overlap 989754, overlap 989755 GCGCTCAAAGAAGTT GCAGCGCCT GGTG ATGCGCTGC TTTTTAAAGGCTCAC Ctha_0829 988424 - 989845 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase Ctha_0830 989965 - 991071 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 1440 992312 - 992292 - g 81 -4.8 -5.10208 | gap 1 GAATCCCAAGAAAAA GTTGTCCAA GCTT TTGG-CAAC CTAACAAAGGTGATG Ctha_0831 991077 - 992483 + | UDP-N-acetylmuramoylalanine/D-glutamate ligase TERM 1441 994049 - 994026 - g 86 -5.2 -5.53079 | gap 1, opp_overlap 994025 994039, overlap 994039 AAAACAGAGAAAAAA GCTG-AGCCGA AAA CCGGCTTCGGC GGTTATGCGGAGGCG Ctha_0832 992802 - 994073 + | cell cycle protein Ctha_0833 994077 - 995174 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 1442 995752 - 995732 - g 70 -9.7 -3.05046 | opp_overlap 995735, overlap 995731 GGACTTTTTTAAAAC TCACGCCGA CAA TTGGCGTGA TTACAACACTTGAAG Ctha_0834 995209 - 996621 + | UDP-N-acetylmuramate/alanine ligase Ctha_0835 996618 - 997064 + | hypothetical protein TERM 1443 997897 - 997913 + G 79 -10.1 -3.73775 | opp_overlap 997895 997890 997897 TTGGGAAATGCAACA GCCAGCG ATG TGCTGGC TTTGATCGAACTGGC Ctha_0836 997078 - 998013 + | UDP-N-acetylenolpyruvoylglucosamine reductase Ctha_0837 998029 - 998925 + | hypothetical protein Ctha_0838 999025 - 1000365 + | cell division protein FtsA TERM 1444 1000359 - 1000347 - f 89 -4.1 -5.80951 | overlap 1000348 ATTGAAAATAAAAAA CTGGT TAG ACCAA ATATGATAGGTCTTA Ctha_0839 1000518 - 1001804 + | cell division protein FtsZ TERM 1445 1001864 - 1001881 + F 89 -6.2 -5.61881 | opp_overlap 1001864 TGCTTCAAATAGTAA GGCCGC CCATGA GTGGCC TTTTTGTTTTTGCCA TERM 1446 1002065 - 1002053 - g 70 -4.7 -4.5028 | overlap 1002054 1002056 AGTAGAAGAAAATAA GCAGC TCG GCAGC GAGCCTGATAAAATC TERM 1447 1002270 - 1002280 + G 76 -2.4 -5.33921 | TTAGTTTTCAACCTT TCCG GCT CGGC TTTTTTACTTGGTTT TERM 1448 1002832 - 1002842 + G 85 -6.8 -5.03314 | TGATCATCATTATTT GCTC GGT GAGC TTTTTTGCAGGTCCA Ctha_0840 1002015 - 1003361 + | major facilitator superfamily MFS_1 TERM 1449 1003425 - 1003376 - T 87 -10.3 -4.35581 | gap 1, opp_overlap 1003369 1003376 1003396, overlap 1003377 GTAAAACATGCAAAA TGCGTTT-CAAGCAAGTTTTAG TTTTTGG CGAAAACTTGCTTGAAAACGCC TCTCTGTTGGCAAAA TERM 1450 1003376 - 1003425 + T 83 -11.7 -3.09273 | gap 1, opp_overlap 1003376 1003377, overlap 1003369 1003396 GTAAAACATGCAAAA TGCGTTT-CAAGCAAGTTTTAGTT TTT GGCGAAAACTTGCTTGAAAACGCC TCTCTGTTGGCAAAA TERM 1451 1003424 - 1003377 - T 95 -13.8 -3.20264 | gap 1, opp_overlap 1003369 1003376 1003396, overlap 1003376 TAAAACATGCAAAAT GCGTTT-CAAGCAAGTTTTAG TTTTTGG CGAAAACTTGCTTGAAAACGC CTCTCTGTTGGCAAA Ctha_0841 1004120 - 1003446 - | transcriptional regulator, Crp/Fnr family TERM 1452 1004247 - 1004227 - H 79 -6.9 -4.62392 | opp_overlap 1004227, overlap 1004218 TAATAATTAAACAAA GTTATCAAC ATT GTTGAAAAC GTGTGGATAACTTTA TERM 1453 1004447 - 1004411 - H 100 -13.3 -5.03145 | opp_overlap 1004417 TAAGCCGGTAAAAAA CGAAAATGCTGAAAATA GAG CATTTTCAGCATTTTGG CGATTCGAAAAGAAA TERM 1454 1004417 - 1004441 + H 85 -10.2 -4.14392 | opp_overlap 1004411 GGTAAAAAACGAAAA TGCTGAAAAT AGAGC ATTTTCAGCA TTTTGGCGATTCGAA TERM 1455 1004498 - 1004459 - H 73 -7.3 -4.13767 | gap 1, opp_overlap 1004463 1004467, overlap 1004463 1004478 1004480 TTGGCGATTCGAAAA GAAATCCACGT-GTTATC AACAG GTTATCCACGTGGATTTC ACGTGGATAAAGGGC TERM 1456 1004505 - 1004463 - H 74 -6.3 -4.67048 | gap 1, opp_overlap 1004463 1004467, overlap 1004459 1004478 1004480 CGATTCGAAAAGAAA TCCACGTGTTATCAACA-GG TTAT CCACGTGGATTTCACGTGGA TAAAGGGCACTTTCG TERM 1457 1005074 - 1005086 + G 91 -7.7 -5.14563 | opp_overlap 1005071 CTGAAAAGGAATCGG CTGAG CAG CTCAG TTTTTTGATCAAAAC Ctha_0842 1004788 - 1005921 + | DNA polymerase III, beta subunit TERM 1458 1005944 - 1005984 + F 74 -9.2 -3.14132 | gap 2, overlap 1005947 TTTATAACGATTTTT GCGGAGAG-AAGAGC-CAGT GAT GCTGCGCTTTTTCTCTTCGC TTCGTACAGCAAAAA TERM 1459 1006407 - 1006422 + G 80 -6 -5.0133 | overlap 1006419 TAACTCAAGGTTCAC CGCAGG AGCG CCGGCG TTTTTTGGACGCCTC Ctha_0843 1006019 - 1007125 + | DNA replication and repair protein RecF Ctha_0844 1007144 - 1007437 + | hypothetical protein TERM 1460 1008163 - 1008174 + G 73 -4.4 -4.77157 | ATTTCAAAAAGCCTC GCAT ATCC ATGC TTTTTAATGACTTAA Ctha_0845 1007625 - 1009475 + | hypothetical protein TERM 1461 1009538 - 1009510 - T 89 -7.5 -5.02476 | opp_overlap 1009510 1009516, overlap 1009516 AGATGTTGTAAAAAA GAAAAAGAGGCAT TCA AAGCCTCTTTTTT CTTTCTCAGAAAGTC TERM 1462 1009510 - 1009539 + T 70 -7.3 -3.86346 | gap 1, opp_overlap 1009510 1009516, overlap 1009516 AGATGTTGTAAAAAA GAAA-AAGAGGCAT TCA AAGCCTCTTTTTTC TTTCTCAGAAAGTCA TERM 1463 1009516 - 1009532 + T 100 -6.5 -5.72622 | opp_overlap 1009516 1009510, overlap 1009510 TGTAAAAAAGAAAAA GAGGCAT TCA AAGCCTC TTTTTTCTTTCTCAG TERM 1464 1009532 - 1009516 - T 100 -6.5 -5.75538 | opp_overlap 1009510 1009516, overlap 1009510 TGTAAAAAAGAAAAA GAGGCAT TCA AAGCCTC TTTTTTCTTTCTCAG Ctha_0846 1010052 - 1009747 - | transcriptional regulator, XRE family Ctha_0847 1010417 - 1010049 - | protein of unknown function DUF1044 TERM 1465 1010160 - 1010178 + g 72 -3.2 -5.00616 | AAATAGCTCTTTGGG TGAAAGGT TTG ATTTTTCA TTTTTTGAGAAACCA TERM 1466 1010480 - 1010537 + r 91 -13.8 -2.53134 | gap 2, opp_overlap 1010497, overlap 1010480 1010494 1010495 TGTATTCCGTTTGTT TTTAACGTTGCTAAT-CAGCCG-CGC TGCTTTTT GCGTCGGCTGAATTAGCAACGTTAGC GATTTATTCCTTTGA TERM 1467 1010480 - 1010538 + r 78 -10 -3.23697 | gap 3, opp_overlap 1010497, overlap 1010480 1010494 1010495 TGTATTCCGTTTGTT T-TTAACGTTGCTAAT-CAGCCG-CGC TGCTTTTT GCGTCGGCTGAATTAGCAACGTTAGCG ATTTATTCCTTTGAT Ctha_0848 1012357 - 1010639 - | hypothetical protein TERM 1468 1011555 - 1011567 + g 75 -6.3 -4.38748 | opp_overlap 1011555, overlap 1011552 GGACGCACTGCCAAA TCACT TGG AGTGA TTATTTGTTTATCGG TERM 1469 1012135 - 1012109 - G 100 -18.1 -6.3578 | ATTGCAAAAAAAAAA GCTCCTCACCG ACAAA CGGTGAGGAGC AGCAGAAATCGCTTT Ctha_0849 1014797 - 1012614 - | methylmalonyl-CoA mutase, large subunit TERM 1470 1014600 - 1014580 - G 82 -11.1 -3.53224 | overlap 1014582 TACGGCCCGCGCAAA TACGGCGGA ATG CCCGCCGCA AACGAAAGATGCTCC TERM 1471 1014598 - 1014582 - G 79 -11.5 -3.34398 | overlap 1014580 CGGCCCGCGCAAATA CGGCGGA ATG CCCGCCG CAAACGAAAGATGCT TERM 1472 1014704 - 1014722 + g 76 -4.4 -5.0133 | opp_overlap 1014693, overlap 1014705 CAAACGAGTCGGCGC CCGCCTGC TCG GCAAGCGA TTTTTTCCACGCCTC TERM 1473 1014880 - 1014894 + r 71 -6.4 -4.13995 | CAATGACAAAAATTT CTCGGT CGC ACTGAG TTTCCTTTGTCGCAC Ctha_0850 1017062 - 1015167 - | Methylmalonyl-CoA mutase TERM 1474 1015533 - 1015495 - G 78 -6 -4.73388 | gap 1, overlap 1015497 1015522 AAGTTGTAGGAAAAA GTCGCTCGTGCGATTCG CATTGC CAAATCGC-CGATCGGC AATAAAAAGACTTTC TERM 1475 1015816 - 1015835 + g 76 -4.9 -4.86939 | opp_overlap 1015818 GTTCCGGCGCGAAGC GAGGCCG AAAGCC CGCCCTC TTTTTCAATTTCTTG TERM 1476 1016458 - 1016474 + g 73 -4.3 -4.77036 | overlap 1016459 CCGATCAGCTTTGCT GCCGTGA GCA TCGCGGA TTTTTCATCCTGCGC Ctha_0851 1017672 - 1017205 - | phosphatidylglycerophosphatase A Ctha_0852 1018311 - 1017688 - | CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase TERM 1477 1017932 - 1017918 - G 74 -5.8 -4.67353 | opp_overlap 1017918 1017920 TGACGTAGGCAAAAA CATTTT GGA AAAATG TCTTCAGCTTGGCCG TERM 1478 1018133 - 1018120 - G 71 -9.5 -3.19389 | opp_overlap 1018127 CAAGGGATCCATGAA CGCGC CCCA GCGCG TAACGACGCCGTATT Ctha_0853 1020758 - 1018380 - | MutS2 family protein TERM 1479 1018852 - 1018862 + g 70 -2.4 -5.06414 | overlap 1018855 TCGATGCTCATATTG ACCG GCG CGGA TTTTTGTTCGGCAAA TERM 1480 1019007 - 1019038 + g 80 -5.8 -5.00616 | gap 1, opp_overlap 1019002 1019018 1019019, overlap 1019018 AATCAATTGATTGGC GTCGGCCAAAACGCG CTT CGCGTCTTG-CAGGC TTTTTTGGCGCAGCG TERM 1481 1019028 - 1019018 - G 76 -8.2 -4.07568 | opp_overlap 1019007 1019018, overlap 1019019 TGGCGTCGGCCAAAA CGCG CTT CGCG TCTTGCAGGCTTTTT TERM 1482 1020865 - 1020841 - H 70 -3 -5.08011 | AAAAGGGTTAAAAAA TTATAAATCC ATTAA AGATTTACAA TAGTTTCAAAACAAT Ctha_0854 1021159 - 1022040 + | UspA domain protein TERM 1483 1022091 - 1022074 - T 83 -8.5 -4.46615 | opp_overlap 1022074, overlap 1022069 CACGATCAATGAAAA GCAATCT TCCG AGATTGC TTTTTTGTTTTTCAC TERM 1484 1022074 - 1022091 + T 100 -8.5 -5.93252 | opp_overlap 1022074 1022069 CACGATCAATGAAAA GCAATCT TCCG AGATTGC TTTTTTGTTTTTCAC Ctha_0855 1023887 - 1022103 - | ATP-dependent DNA helicase, RecQ family Ctha_0856 1024256 - 1024933 + | hypothetical protein TERM 1485 1025341 - 1025363 + G 76 -7.7 -4.3255 | opp_overlap 1025321 GGCCATGCACTCGCC GCGTGCG CAAGCCGAC CGCACGC TTTATTCCTTAGACA TERM 1486 1025599 - 1025566 - g 74 -10.9 -2.84325 | overlap 1025563 CGGCCTGAAACATTA CGACGCCGGTCGGAC GCTC GCCGAACCGGCCTCG CGCGGCCTTACCGAA Ctha_0857 1025069 - 1026937 + | glucose inhibited division protein A TERM 1487 1027020 - 1026973 - f 100 -13.1 -3.22223 | gap 1, opp_overlap 1026976 1026988, overlap 1026974 1026980 1026982 1026988 TAATGTCATGATTAA GGATGAACAGGATAAGCAAAAA GCTTT TTTTTGCTTATCC-GCTCATCT GCTAAGTCCAGTGTG TERM 1488 1027019 - 1026974 - f 100 -16.6 -2.53012 | gap 1, opp_overlap 1026976 1026988, overlap 1026973 1026980 1026982 1026988 AATGTCATGATTAAG GATGAACAGGATAAGCAAAAA GCTTT TTTTTGCTTATCC-GCTCATC TGCTAAGTCCAGTGT TERM 1489 1026976 - 1027017 + F 86 -11.9 -2.80935 | gap 1, opp_overlap 1026974 1026973 1026980 1026982 1026988, overlap 1026988 TGTCATGATTAAGGA TGAACAGGATAAGCAAAAAG CTT TTTTTTGCTTATCC-GCTCA TCTGCTAAGTCCAGT TERM 1490 1027013 - 1026980 - f 79 -10.6 -3.29364 | gap 1, opp_overlap 1026976 1026988, overlap 1026974 1026973 1026982 1026988 ATGATTAAGGATGAA CAGGATAAGCAAAAA GCTTT TTTTTGCTTATCC-G CTCATCTGCTAAGTC TERM 1491 1027012 - 1026982 - f 95 -14.3 -3.20941 | opp_overlap 1026976 1026988, overlap 1026980 1026974 1026973 1026988 GATTAAGGATGAACA GGATAAGCAAAAA GCTTT TTTTTGCTTATCC GCTCATCTGCTAAGT TERM 1492 1027227 - 1027216 - f 90 -2.2 -5.88061 | AAAAAACTAAAAAAA CCCA CGTA TGAG CCTTTCAGAAAGTTA TERM 1493 1027459 - 1027447 - g 77 -3.3 -5.2189 | TGAACGATTAAAAAA TGCGC CAA GCTCA GCCACATACTCGTTT Ctha_0858 1027223 - 1028167 + | hypothetical protein TERM 1494 1028819 - 1028832 + F 75 -4.5 -5.12707 | CATCAAACCGAAATT TGCTC GAAT GGGCA TTTTTTCGCGTTTCG TERM 1495 1029791 - 1029814 + G 71 -3.8 -4.91109 | gap 1, overlap 1029792 CGTATTGCGAAATCC CCG-GTCGGCA TGT TGTCGACACGC TTTTTCTCGTGCAAA TERM 1496 1030156 - 1030141 - g 89 -9 -4.57073 | TATCTTCGCGAAAAA GTCTCG CTGC CGAGAC CGCAAATCGGGCAGC TERM 1497 1030699 - 1030670 - g 72 -4.9 -4.58663 | gap 1, overlap 1030659 1030673 AGGACGTTTCAAAAA CGATGCCGGAAGGC ATT ACCATC-GGCTTCG ACGGGCGCTTCAAGA TERM 1498 1031139 - 1031128 - g 74 -5.8 -4.61873 | overlap 1031130 TCGGACAAAGGAAAA CTCG TCGC CGAG TGGGACGCGAAAAAT Ctha_0859 1028914 - 1031352 + | DNA polymerase B region TERM 1499 1031407 - 1031360 - f 81 -4.2 -5.4505 | gap 1, overlap 1031361 1031372 CGTTTTAAGAAAAAA GTTAGGCGACAATCCCTCTCCAA TCA TCAGAGAGGGATT-CCGGCAAAT GCGAAAGAAAGATAT TERM 1500 1031406 - 1031361 - f 72 -7.7 -3.86307 | gap 1, overlap 1031360 1031372 GTTTTAAGAAAAAAG TTAGGCGACAATCCCTCTCCAA TCA TCAGAGAGGGATT-CCGGCAAA TGCGAAAGAAAGATA TERM 1501 1031396 - 1031372 - f 84 -11.5 -3.34236 | overlap 1031361 1031360 AAAGTTAGGCGACAA TCCCTCTCCAA TCA TCAGAGAGGGA TTCCGGCAAATGCGA Ctha_0860 1031406 - 1031903 + | hypothetical protein Ctha_0861 1032007 - 1032498 + | hypothetical protein TERM 1502 1032784 - 1032804 + T 73 -9.7 -2.50791 | opp_overlap 1032776, overlap 1032783 1032781 AAAAGAGCGACCGGT GCCGGATTG GGA TAGTCCGGC GTGATTTTGTGCGTA Ctha_0862 1033218 - 1032940 - | hypothetical protein TERM 1503 1033730 - 1033767 + G 71 -10.5 -2.73771 | gap 1, opp_overlap 1033730 1033731 1033735, overlap 1033729 CAACCGGCGTGGAAA TGGAAGCGCTCACGGCGG TCT CCGTCGCG-GCGCTTACG ATTTACGACATGTGC TERM 1504 1033766 - 1033731 - g 76 -11.8 -2.72043 | gap 1, opp_overlap 1033730 1033729, overlap 1033730 1033735 AACCGGCGTGGAAAT GGAAGCGCTCACGGCGG TCT CCGTCGCG-GCGCTTAC GATTTACGACATGTG TERM 1505 1033762 - 1033735 - g 77 -11.2 -3.27525 | gap 1, opp_overlap 1033730 1033729, overlap 1033731 1033730 GGCGTGGAAATGGAA GCGCTCACGGCGG TCT CCGTCGCG-GCGC TTACGATTTACGACA TERM 1506 1034203 - 1034218 + G 77 -10.4 -3.30124 | ACCGCCATGCTCTCG CGCCTG ACCG CAGGCG TTATAAAAAATAGCA Ctha_0863 1033399 - 1034355 + | molybdenum cofactor biosynthesis protein C TERM 1507 1034349 - 1034337 - f 74 -7.7 -3.94933 | overlap 1034326 1034335 GCAAGGCGAAAAACA TTCGG CAA CCGAA AAATAAAAATGTATC TERM 1508 1034781 - 1034765 - g 89 -6.5 -5.40474 | overlap 1034766 AGCGCGGGAAAAAAA GGCCGAA ATA TTCGGCT CGCGGGTGAGGAAAT TERM 1509 1034780 - 1034766 - g 79 -10 -3.83561 | overlap 1034765 GCGCGGGAAAAAAAG GCCGAA ATA TTCGGC TCGCGGGTGAGGAAA Ctha_0864 1034372 - 1035592 + | molybdenum cofactor synthesis domain protein Ctha_0865 1036978 - 1035713 - | MscS Mechanosensitive ion channel TERM 1510 1037151 - 1037124 - H 83 -5.7 -5.36689 | gap 2 AAAGTAAAAAGAAAA TGCGCTCAGCTTT TGGT AAAGC-G-GCGCA AAATTATATCATTTT TERM 1511 1037214 - 1037225 + H 80 -5.8 -5.04249 | opp_overlap 1037212 1037214 GAAGGAAGGATAACA TGCG TCGG CGCA TTTCTTTTTTACCGA Ctha_0866 1037310 - 1037834 + | protein of unknown function DUF1232 Ctha_0867 1038158 - 1038820 + | transcriptional regulator, TetR family TERM 1512 1038852 - 1038906 + T 86 -7.5 -4.98255 | gap 1, overlap 1038856 AATCTGTTGCAAAAA TAAATACGCTTTATAGAGCTATGAAC CCTC GTT-ATGGTTCTGCAAGGCGTGTTTA TTTTTGTCCTTCCAA TERM 1513 1038856 - 1038902 + T 71 -3.9 -5.00267 | gap 1, overlap 1038852 TGTTGCAAAAATAAA TACGCTTTATAGAGCTATGAAC CCTC GTT-ATGGTTCTGCAAGGCGTG TTTATTTTTGTCCTT Ctha_0868 1040311 - 1039130 - | protein of unknown function UPF0075 TERM 1514 1039750 - 1039771 + g 72 -2.9 -5.0133 | gap 1 TTAGGTTGCTCATGC CGC-CGATGT TGA GCAGCGCGCG TTTTTTGCGCGAATG TERM 1515 1040213 - 1040182 - G 100 -15.8 -4.4267 | opp_overlap 1040181 1040180 TCTGAAAAGCCAAAA GCACGGGGCGAGCC TGAG AGCCCGCGCCGTGC AATTTCACCAGCCCG Ctha_0869 1041621 - 1040305 - | threonine synthase TERM 1516 1040765 - 1040785 + g 72 -3.2 -5.06816 | opp_overlap 1040770, overlap 1040766 TAGCTGCCAGTTTCA AGATAGCG CGGGA CGCTGTCG TTTTTATTGGACGCT TERM 1517 1040893 - 1040905 + g 89 -5.5 -5.75538 | opp_overlap 1040889 CACGGTAAAGACGAT TTCCG CAT CGGGA TTTTTCTTTTTTAGC Ctha_0870 1042783 - 1041824 - | histidine kinase TERM 1518 1042440 - 1042469 + g 100 -11.5 -4.82667 | gap 1, opp_overlap 1042439 TCCATCGTGATCAAT TCCGCAT-AGGCCA TAA TGGCCTGAAGCGGA TTTTTCATGTCGTGA Ctha_0871 1043384 - 1042767 - | Tetratricopeptide TPR_2 repeat protein TERM 1519 1043201 - 1043213 + g 77 -3.3 -5.24416 | overlap 1043201 GGCTTAATTCAAGTG CGCGT GTT GCGTG TTTTTGTTGTAATTC Ctha_0872 1044419 - 1043460 - | homoserine kinase TERM 1520 1044471 - 1044489 + H 89 -3.9 -5.73563 | TCAAGTTATGTGACA CGTTTGA AGTTC TTAAACG TTTTTTTGATTTGCT Ctha_0873 1044659 - 1046272 + | ATP synthase F1, alpha subunit TERM 1521 1046296 - 1046311 + F 72 -7.5 -3.83566 | opp_overlap 1046296, overlap 1046294 TAGCAACACAGAAAA GGCCG TTCAGT CGGCC TCTTTATTATTCGGT TERM 1522 1046311 - 1046296 - f 84 -7.5 -4.6955 | opp_overlap 1046296 1046294 TAGCAACACAGAAAA GGCCG TTCAGT CGGCC TCTTTATTATTCGGT Ctha_0874 1046357 - 1047271 + | ATP synthase F1, gamma subunit TERM 1523 1047347 - 1047324 - T 71 -8.1 -3.38782 | opp_overlap 1047324, overlap 1047322 TATTAAACCATAAGA CGCCCGGAA GTCTCT TTTCGGGCG TTTTTTATTGTGTCG TERM 1524 1047324 - 1047347 + T 100 -11 -5.60689 | opp_overlap 1047322 1047324 TATTAAACCATAAGA CGCCCGGAAG TCTC TTTTCGGGCG TTTTTTATTGTGTCG Ctha_0875 1048480 - 1047365 - | molybdenum cofactor biosynthesis protein A TERM 1525 1048507 - 1048522 + r 74 -9 -3.67622 | overlap 1048503 GCCTAAAATCAGGCG GGATGG CGTG CCATCC TTCGTTTTGGAACTC Ctha_0876 1049228 - 1048659 - | cytoplasmic chaperone TorD family protein TERM 1526 1049303 - 1049280 - R 73 -9.6 -2.91807 | opp_overlap 1049279 1049278, overlap 1049279 TCATTAAATGTAAAT GGCCAGAACA TAAG CATTCTGGCC GGATTTTTCATTTTT Ctha_0877 1049756 - 1049349 - | hypothetical protein TERM 1527 1049722 - 1049736 + gr 91 -7.2 -5.47399 | overlap 1049710 1049726 ATCTTGTCGAAACGG CGATTT TCA AAATCG TTTTTTTGGAATTGC Ctha_0878 1050372 - 1049728 - | hypothetical protein TERM 1528 1050244 - 1050226 - GR 73 -6.6 -4.2704 | opp_overlap 1050234 1050242, overlap 1050228 GGCATTACCAAGAAA GACACACG CGG CGGGCGTC GTGCTATTCGACTGC Ctha_0879 1051274 - 1050525 - | Nucleotidyl transferase TERM 1529 1050971 - 1050998 + g 91 -8.4 -5.00616 | opp_overlap 1050971, overlap 1050972 TGATGACAAAAAACG GCTCGTGGCTGT TGAA AAAGTCGCGAGC TTTTTTCAAGCCGCC Ctha_0880 1052777 - 1051305 - | hypothetical protein TERM 1530 1051448 - 1051438 - G 72 -5.4 -4.4078 | overlap 1051439 1051440 CCCGTGCAACCAAAA CTGA CCA TCAG GTCTGAAAAGCTGCG TERM 1531 1052415 - 1052427 + g 78 -5.5 -4.88405 | TTGGTAATGCTCAAT CGGGA AGT TTCCG TTTTGTTTGCAAGTT Ctha_0881 1053473 - 1052979 - | hypothetical protein Ctha_0882 1055350 - 1053872 - | glycogen/starch synthase, ADP-glucose type TERM 1532 1054225 - 1054214 - G 70 -2.2 -4.93365 | gap 1, overlap 1054207 1054215 CGGCATAAGGAAAAA GTCCG CGC CGG-C TTCCACCCAGTGCGC TERM 1533 1054479 - 1054495 + g 80 -7.3 -4.67173 | overlap 1054475 AACATGAAACGGTCT TGCAAGG CTT CTTTGCA TTGTTTTTTGCCTTC TERM 1534 1055536 - 1055520 - H 90 -4.4 -5.68023 | opp_overlap 1055520 CCACAAGTAAAAAAA GACGAT TTGCC ATCGCC TTCTCACTTGCATTT Ctha_0883 1055829 - 1056776 + | hypothetical protein TERM 1535 1056799 - 1056830 + T 100 -16.8 -3.07935 | opp_overlap 1056799 1056801 1056806, overlap 1056806 AGCCAAATGTCAAAC CAGAAAACTCCGGT AAAC ACCGGAGTTTTTTG TTAGCTCAATCCGCT TERM 1536 1056830 - 1056799 - T 95 -14.6 -2.82936 | opp_overlap 1056799 1056806, overlap 1056801 1056806 AGCCAAATGTCAAAC CAGAAAACTCCGGT AAAC ACCGGAGTTTTTTG TTAGCTCAATCCGCT TERM 1537 1056828 - 1056801 - T 82 -11.4 -2.9587 | opp_overlap 1056799 1056806, overlap 1056799 1056806 CCAAATGTCAAACCA GAAAACTCCGGT AAAC ACCGGAGTTTTT TGTTAGCTCAATCCG TERM 1538 1056806 - 1056823 + T 100 -11.3 -5.4833 | opp_overlap 1056801 1056799 1056806, overlap 1056799 TGTCAAACCAGAAAA CTCCGGT AAAC ACCGGAG TTTTTTGTTAGCTCA TERM 1539 1056823 - 1056806 - T 90 -11.3 -4.61566 | opp_overlap 1056806 1056799, overlap 1056801 1056799 TGTCAAACCAGAAAA CTCCGGT AAAC ACCGGAG TTTTTTGTTAGCTCA Ctha_0884 1058150 - 1056831 - | HI0933 family protein TERM 1540 1056946 - 1056931 - G 72 -6 -4.54727 | overlap 1056933 GCTTGCAAATTAAAA CCGCCG ATTT CGGCTG CGTAATCCAACAGTT TERM 1541 1057889 - 1057916 + g 78 -6.2 -4.63218 | TGTTGGTAAATTCAT GGAGCGCGGGTT TGAG GAATCGCGCTTC TTTTGTTCGCAAAAA TERM 1542 1058006 - 1058022 + g 83 -4.3 -5.40072 | overlap 1058007 CAGAAATTTTAATTT TGCTGCC GAT GTCAGCG TTTTTTTCAAGCAGC TERM 1543 1058189 - 1058178 - H 71 -4.4 -4.84311 | TGGTATATAATAAAA TAGG ATGG CCTA CGGCGCGGGTTTTGA TERM 1544 1059125 - 1059142 + G 88 -7.7 -5.0538 | gap 1, overlap 1059125 AAAGAAATTCACATT GG-CGGTG GCA CACCGACC TTTTTTAGCATAGAA Ctha_0886 1058780 - 1060186 + | oxygen-independent coproporphyrinogen III oxidase TERM 1545 1060707 - 1060735 + F 100 -11.8 -6.09196 | opp_overlap 1060707 1060705 1060703 CGTCTAAAAATTATA GCGCAATTGTTC TTTCC GGGCAATTGCGC TTTTTTTGTTTTGAG TERM 1546 1060794 - 1060809 + F 74 -4.8 -5.00884 | CCGGGGTTTGTTTCG TTTTTG GAGG CAAAAA TTTTTTAAAACCGGT TERM 1547 1061037 - 1061062 + G 78 -6.1 -4.64861 | gap 1, opp_overlap 1061037, overlap 1061021 CGCCGCCAAAGAAAC CGGC-GAGCGCA TTT TGCCCTCCGTCG TTTATTTTGACGACG TERM 1548 1061270 - 1061255 - g 72 -5.4 -4.45168 | TTTGCAAAATAGAAA TTCGCG GCGG CGCAAA CGGTCAAGATATTCG TERM 1549 1061535 - 1061518 - g 85 -5.5 -5.38054 | opp_overlap 1061520, overlap 1061520 TTGGACAAACAAAAA GACGGCA CGAT TGCCGTT TATGACCTCGGCGGC TERM 1550 1061520 - 1061533 + G 74 -8.1 -3.89346 | opp_overlap 1061520 1061518 GGACAAACAAAAAGA CGGCA CGAT TGCCG TTTATGACCTCGGCG TERM 1551 1061533 - 1061520 - g 79 -8.1 -4.31946 | opp_overlap 1061520, overlap 1061518 GGACAAACAAAAAGA CGGCA CGAT TGCCG TTTATGACCTCGGCG TERM 1552 1062143 - 1062163 + G 72 -8.9 -3.61398 | TCGGCATTGAAACCG TCGGCGCGG TCA CCGTCCCGA TTATTCCGCGCAACA TERM 1553 1062330 - 1062355 + G 80 -6.9 -4.62783 | gap 1, overlap 1062333 GATTCCGGCTATGCC TGCCG-GAATGC CGC GCATTCTCGTCA TTTTTGCGCTCGATG Ctha_0887 1060900 - 1062801 + | 2-alkenal reductase TERM 1554 1062839 - 1062823 - T 90 -9.4 -4.75174 | opp_overlap 1062823 CATTTAATGCAAAAA CCCCGA GGCAG TCGGGG TTTTTTTTGTTTTCA TERM 1555 1062823 - 1062839 + T 100 -9.4 -6.34616 | opp_overlap 1062823 CATTTAATGCAAAAA CCCCGA GGCAG TCGGGG TTTTTTTTGTTTTCA Ctha_0888 1063453 - 1063073 - | hypothetical protein Ctha_0889 1064183 - 1063434 - | hypothetical protein TERM 1556 1063981 - 1063997 + g 70 -2.2 -5.00616 | TCGAAATTTGTAGTC GGAGTC GATTG GGTTCC TTTTTTACCACCACC TERM 1557 1064232 - 1064268 + r 85 -9.5 -4.30253 | overlap 1064229 1064254 GTTTGTGTATAGTTA TTGTTCTTACCCCGCCA AAG TGGAGGGATAAAAACAA TTGTTTATATTTCTC TERM 1558 1064254 - 1064283 + r 70 -5.1 -4.67635 | overlap 1064232 1064229 TACCCCGCCAAAGTG GAGGGATAAAAAC AATT GTTTATATTTCTC TTTTATCATTTTGGC Ctha_0890 1065167 - 1064298 - | integrase family protein TERM 1559 1064564 - 1064536 - G 71 -9.6 -3.21981 | overlap 1064534 AAAATATTAGCAACA CTGGTTGGAGAA TACTT TCCTCCATCCAG CCCTTCAAAAAGATA TERM 1560 1064824 - 1064843 + g 70 -2.2 -5.04377 | overlap 1064820 CTTTTCACTTCGTTT TTGCTTAA AACT TTAGGTAA TTTATTTTCTTTTCG TERM 1561 1065457 - 1065468 + r 74 -5.8 -4.65838 | CAAACCGGCTTAACT GCAG GGAA CTGC TTTTTCAAATATGTG TERM 1562 1065519 - 1065494 - R 91 -9 -5.00884 | opp_overlap 1065496, overlap 1065496 ATGTGGTGTAAAAAA TAGAGGCGCA TAACCG TGCGCCTCTT CTTTTCATACAAAGC TERM 1563 1065517 - 1065496 - R 90 -11.6 -4.13561 | opp_overlap 1065496, overlap 1065494 GTGGTGTAAAAAATA GAGGCGCA TAACCG TGCGCCTC TTCTTTTCATACAAA TERM 1564 1065496 - 1065517 + r 95 -12.3 -4.25256 | opp_overlap 1065496 1065494 GTGGTGTAAAAAATA GAGGCGCAT AACC GTGCGCCTC TTCTTTTCATACAAA Ctha_0891 1066744 - 1065542 - | tryptophan synthase, beta subunit TERM 1565 1065615 - 1065636 + g 72 -6.6 -4.26903 | gap 1 TTGACCAAGATATTT TTGC-CCGG CAATT CCGGCGCAA TTTTCATCGCGTAAG TERM 1566 1065836 - 1065851 + g 71 -6.8 -4.08216 | GGAATAAACCGGCAG CGGCTC GCCC GAGTCG TTTTGCAGCAAGTAG TERM 1567 1066373 - 1066402 + g 83 -9.3 -4.20136 | opp_overlap 1066346, overlap 1066396 TGCAAGCGCCACGCC GTGTTGGCCGG CGCCGGTT TCGGCCAGCAC TTTGGTTTTGCCCAT TERM 1568 1067380 - 1067394 + H 71 -4.3 -4.82685 | GCCTTTTTCTTACTT TGCAA ACGAG TTGCA TATTTTTTTTTTCAA Ctha_0892 1067433 - 1067825 + | Rhodanese domain protein TERM 1569 1067842 - 1067804 - f 75 -8.2 -3.76413 | opp_overlap 1067804 GGGCAAAATGCTAAA GGTCATTCGCAAAGGCGT ATA AGGCGTTTGCAAATGATC TTCTTAATGTAAATG TERM 1570 1067804 - 1067842 + F 75 -8.2 -3.78034 | opp_overlap 1067804 GGGCAAAATGCTAAA GGTCATTCGCAAAGGCGT ATA AGGCGTTTGCAAATGATC TTCTTAATGTAAATG TERM 1571 1068226 - 1068212 - f 73 -2.8 -5.252 | opp_overlap 1068201 TATCTCGATAAAAAA TCGATA ATG TTTCGA TAACGTTCCCCTTGT TERM 1572 1068578 - 1068548 - g 100 -8.2 -5.40072 | GTTTCTGGAAAAAAA GCCCGAATCGGAAA ATA TTTCGGAGGCGGGC GACGAGCCGAGCGCG TERM 1573 1068643 - 1068631 - g 78 -6.2 -4.62872 | overlap 1068621 1068633 AGCAAGCCGCAAAAA CGGC AGCAA GCCG CAGCGAAAGCGAGGC Ctha_0893 1068381 - 1069136 + | peptidase S24 and S26 domain protein TERM 1574 1069152 - 1069162 + F 71 -6.8 -4.0896 | overlap 1069142 GCCGTCGCCGGCACA TCGC GCC GCGA TTTTCCGCCACATTT TERM 1575 1070506 - 1070488 - g 72 -5.3 -4.65895 | overlap 1070489 CGCTTTATTTAAAAA CCCATCA TGCGT TGATGGA TAACGATTCCGGCCT Ctha_0894 1069311 - 1071179 + | histidine kinase TERM 1576 1071586 - 1071560 - g 81 -12.4 -3.29461 | opp_overlap 1071567, overlap 1071567 TAAGCCGTGGGACAA TGACAAACTGCG CAA CGCAGTTCATCA AGCGTGCCAGTTCTC TERM 1577 1071579 - 1071567 - g 79 -9.1 -4.1021 | opp_overlap 1071567, overlap 1071560 TGGGACAATGACAAA CTGCG CAA CGCAG TTCATCAAGCGTGCC Ctha_0895 1071237 - 1072175 + | response regulator receiver protein TERM 1578 1072231 - 1072204 - f 100 -15 -3.68261 | overlap 1072220 1072221 CGATAATATTCGAAA GGTTACCCAACA GAAA TGCTGGGTAACC AGCTGATAAAGCTTC Ctha_0896 1072393 - 1073772 + | phosphate-selective porin O and P TERM 1579 1073873 - 1073855 - T 70 -3 -5.05577 | opp_overlap 1073857, overlap 1073856 1073857 AAACCAAACCAAAAA GCCCCAAC GCT GTTGGGTT TTTTTTTGTTCTCAT TERM 1580 1073857 - 1073871 + T 100 -10 -6.41881 | opp_overlap 1073857 1073856 1073855 ACCAAACCAAAAAGC CCCAAC GCT GTTGGG TTTTTTTTTGTTCTC TERM 1581 1073871 - 1073857 - T 74 -10 -2.74917 | opp_overlap 1073857, overlap 1073856 1073855 ACCAAACCAAAAAGC CCCAAC GCT GTTGGG TTTTTTTTTGTTCTC TERM 1582 1073980 - 1073994 + T 76 -2.8 -5.41143 | TTACTTTTTTTCATT TTCATC GGG GAAGAA TTTTTTTGCGCAATC Ctha_0897 1075021 - 1074008 - | hypothetical protein TERM 1583 1074879 - 1074854 - G 70 -9.7 -2.96387 | overlap 1074837 1074853 CAGACAGAGAATAAT CGCTGACCAGC TCAC GCCAATCAGCG CGAATAGTTTAACAA Ctha_0898 1076966 - 1075383 - | major facilitator superfamily MFS_1 TERM 1584 1075580 - 1075559 - G 70 -2.3 -5.00765 | gap 1 AAGCAATTAGAAAAA CTTCCTGAAC TGA GTCC-GAAAG CGCCTGAGACACTTT TERM 1585 1075803 - 1075817 + g 77 -9.2 -3.90291 | overlap 1075804 ATTTGTTGAGGTTGC CGCGCC GAT GGTGCG TTTGCTTACGGCGCT TERM 1586 1076526 - 1076508 - G 73 -2.2 -5.24129 | overlap 1076492 1076509 CGTCTCGACAAAAAA CGCGCCGA CTG CCGGCCCC ACCACGCTGGCAACT TERM 1587 1076736 - 1076723 - G 72 -3.1 -4.91511 | AGCCGAGCATAAAAA TACCG ATGG CGATA AGCACAAAGCGTTTG TERM 1588 1077465 - 1077436 - H 100 -5.1 -5.84381 | overlap 1077442 1077448 1077451 TCATTAATAAAAAAA GAGAAATATAAAC AATT GTTTTTATCCCTC CACTTTGGCGGGGTA TERM 1589 1077495 - 1077442 - H 74 -5.5 -4.74406 | gap 1, overlap 1077436 1077448 1077451 ATAAAAAAAGAGAAA TATAAACAATTGTTTTTATCCCTCCA CTT TGGCGGGGTAAGAACAA-TGACTATA CACAAACGTTGTGCG TERM 1590 1077489 - 1077448 - H 75 -6.7 -4.47049 | gap 1, overlap 1077436 1077442 1077451 AAAGAGAAATATAAA CAATTGTTTTTATCCCTCCA CTT TGGCGGGGTAAGAACAA-TG ACTATACACAAACGT TERM 1591 1077487 - 1077451 - H 85 -9.5 -4.30253 | overlap 1077436 1077448 1077442 GAGAAATATAAACAA TTGTTTTTATCCCTCCA CTT TGGCGGGGTAAGAACAA TGACTATACACAAAC TERM 1592 1078264 - 1078236 - g 78 -6.1 -4.55997 | opp_overlap 1078236, overlap 1078253 ACATACAAGAATAAA TCAGTTAATCCAA ATA TTGCATTGACTGA TGCATTGACAATTAT Ctha_0900 1077513 - 1078769 + | Tetratricopeptide TPR_2 repeat protein Ctha_0901 1078771 - 1079175 + | Domain of unknown function DUF1863 TERM 1593 1079943 - 1079927 - g 100 -12.3 -4.37711 | opp_overlap 1079921 CGAGTAAACTCAAAA GGCGAGT TTA ACTCGCC AGTGGGTGATTACGA Ctha_0902 1079396 - 1080385 + | DNA adenine methylase Ctha_0903 1080385 - 1080876 + | 4-diphosphocytidyl-2-methyl-D-erithritol synthase Ctha_0905 1081481 - 1081723 + | hypothetical protein TERM 1594 1081738 - 1081717 - T 70 -2.9 -5.13722 | opp_overlap 1081736 TTCAGTAAAAGAAAA CGCCTAACC AGTC GTTCAAGCG GATGGCGGAAAAAGA TERM 1595 1081924 - 1081949 + T 100 -9 -5.55664 | opp_overlap 1081924 GATCAATTAAAAAAA CCCTTCTCCC AAAATC GGAAGAAGGG TTTTTTTGATAATAA TERM 1596 1081949 - 1081924 - T 100 -11.9 -5.65513 | opp_overlap 1081924 GATCAATTAAAAAAA CCCTTCTCCCA AAAT CGGAAGAAGGG TTTTTTTGATAATAA Ctha_0906 1084145 - 1081980 - | oxidoreductase domain protein TERM 1597 1083787 - 1083759 - G 75 -6.7 -4.51812 | gap 2, overlap 1083760 1083761 TGGTACAACAACAAA CTCGGCGTGCGAC GCATA GCCGC-CGCCG-G CGCACGCAACGCGGT TERM 1598 1083786 - 1083761 - G 70 -10.4 -2.57496 | gap 1, overlap 1083759 1083760 GTACAACAACAAACT CGGCGTGCGAC GCATA GCCGC-CGCCG GCGCACGCAACGCGG TERM 1599 1084327 - 1084317 - H 83 -6.8 -5.16472 | AAAAATCGGAAAAAA CGCT CAG AGCG AATGGCCAAAAGAGC TERM 1600 1086023 - 1085984 - g 95 -12.4 -3.96624 | gap 1, opp_overlap 1085998, overlap 1085998 GAGTTGGATTATAAA CGTG-CGCGTAAAAATATC TTG GATATTTTCACGCGTCAAG AGGAAGGCTATCACA Ctha_0907 1084646 - 1086751 + | 4-alpha-glucanotransferase TERM 1601 1086923 - 1086947 + G 80 -6.4 -4.82901 | overlap 1086924 GTCATTTTTTCAGAG TCGTTTGCAC AAACG GCGCAAACGG TTTTTGTGCGAGAAG TERM 1602 1087302 - 1087290 - g 80 -5.5 -4.9138 | overlap 1087291 ATGATGGAAAGAAAA CGCTC ACT GAGCA AATCACCTACAACTA TERM 1603 1087439 - 1087426 - g 70 -2.3 -4.93296 | CTACGACGACAAAAA CCGCG TGAT CACAG AGGAAGTTTTCACAG Ctha_0908 1086848 - 1088125 + | hypothetical protein TERM 1604 1088124 - 1088103 - T 90 -9.5 -4.81851 | opp_overlap 1088106 ACGCAAATGGAAAAA TAACGCGTC GGAA AACGCGTTA GCTGAGAACTCACCG Ctha_0909 1088565 - 1088134 - | Holliday junction resolvase YqgF TERM 1605 1088253 - 1088241 - G 70 -4.7 -4.43477 | opp_overlap 1088241 CTGAGGCAATTAAAA GGCGC ATA GCGGC TTTGGATGAGCCAAA TERM 1606 1088367 - 1088390 + g 80 -6 -5.09225 | overlap 1088360 1088369 TTGCGCTGCCATCGC CGTTGGTTGG ATAG CCAACCAATA TTTTTTCGATGCCAT TERM 1607 1088369 - 1088388 + g 87 -10.8 -4.17608 | overlap 1088360 1088367 GCGCTGCCATCGCCG TTGGTTGG ATAG CCAACCAA TATTTTTTCGATGCC Ctha_0910 1088922 - 1088575 - | histone family protein DNA-binding protein TERM 1608 1089162 - 1089173 + r 72 -2.2 -5.27206 | overlap 1089165 TTGCAAATAGCTCGG CGTG AAAA CATG TTTTTCTTCTATATC TERM 1609 1089381 - 1089370 - R 75 -4.4 -5.04385 | opp_overlap 1089380, overlap 1089373 TATAGCTTTAAAAAA CAAC ACAG GTTG TGACGCGCATCACAT TERM 1610 1089383 - 1089373 - R 72 -5.4 -4.62085 | opp_overlap 1089380, overlap 1089370 AGCTTTAAAAAACAA CACA GGT TGTG ACGCGCATCACATTT TERM 1611 1089380 - 1089395 + r 78 -3.3 -5.47846 | opp_overlap 1089370 1089373 AAAAACAACACAGGT TGTGA CGCGCA TCACA TTTTATTTTTTGGTT TERM 1612 1089531 - 1089521 - R 70 -2.6 -5.1523 | opp_overlap 1089529 TTTAGAAGAGAAAAA TTAA CGC TTAA AAAGAGTTTTTATTT Ctha_0911 1090120 - 1089596 - | Glyoxalase/bleomycin resistance protein/dioxygenase TERM 1613 1090177 - 1090150 - R 79 -6.2 -5.01732 | opp_overlap 1090154 1090155, overlap 1090155 AATGTTGCGAAAAAA CGAAAGGCGGCA AATT TGCCGCCCTTTT CTCACTGAACGATAA TERM 1614 1090154 - 1090173 + r 86 -9.2 -4.42386 | opp_overlap 1090150 1090155, overlap 1090155 TTGCGAAAAAACGAA AGGCGGCA AATT TGCCGCCC TTTTCTCACTGAACG TERM 1615 1090172 - 1090155 - R 100 -12.7 -4.42765 | opp_overlap 1090154 1090155, overlap 1090150 TGCGAAAAAACGAAA GGCGGCA AATT TGCCGCC CTTTTCTCACTGAAC TERM 1616 1090155 - 1090172 + r 95 -12.7 -3.2511 | opp_overlap 1090155 1090150, overlap 1090154 TGCGAAAAAACGAAA GGCGGCA AATT TGCCGCC CTTTTCTCACTGAAC Ctha_0912 1090519 - 1090196 - | hypothetical protein Ctha_0913 1091125 - 1090538 - | Guanylate kinase Ctha_0914 1092108 - 1091218 - | domain of unknown function DUF1732 TERM 1617 1092173 - 1092156 - R 70 -2.7 -5.0916 | overlap 1092158 CTTTTAATATAAAAA TTTTCCT GCTT AGGAAGA GCGAAAAATTCAGGT Ctha_0915 1092897 - 1092304 - | hypothetical protein Ctha_0916 1093573 - 1092887 - | hypothetical protein TERM 1618 1094004 - 1093985 - H 91 -7.1 -5.23316 | opp_overlap 1093985 CATTACACGAAAAAA GTCGGGC ATAAAA ACCCGAC TTTTTTTTCTCGAAT TERM 1619 1093985 - 1094004 + H 100 -6.4 -5.94713 | opp_overlap 1093985 CATTACACGAAAAAA GTCGGG CATAAAAA CCCGAC TTTTTTTTCTCGAAT TERM 1620 1094886 - 1094874 - g 78 -6.2 -4.56597 | CGTGCTCGGCAAAAA GCGG GATTT CCGC TTGGGCACTTACGAC TERM 1621 1095019 - 1095029 + G 91 -8.2 -5.00884 | opp_overlap 1094997, overlap 1095014 ATCTGCGTTTCCGAA GCCG ACT CGGC TTTTTTGCCGAACAT Ctha_0917 1094290 - 1095240 + | phosphate binding protein Ctha_0918 1095243 - 1096142 + | phosphate ABC transporter, inner membrane subunit PstC TERM 1622 1096668 - 1096679 + G 71 -7.2 -4.0896 | overlap 1096672 CGCTTTTAATCGCTA CGCC CGTC GGCG TTTTAGCCGCGATTT Ctha_0919 1096415 - 1097299 + | phosphate ABC transporter, inner membrane subunit PstA TERM 1623 1097676 - 1097698 + G 72 -9.1 -3.53444 | GGATGAAATTGTGGA GCGCAGCCT TGTTC AAGCTGCGC TTTGGGACGAGGTGA Ctha_0920 1097293 - 1098060 + | ABC transporter-related protein Ctha_0921 1098057 - 1098824 + | ABC transporter-related protein TERM 1624 1098811 - 1098821 + T 71 -8.2 -3.41701 | opp_overlap 1098810, overlap 1098809 CGGATTACATCGAAG GCCG CTA CGGC TGATTTTTTACTGCC Ctha_0922 1099368 - 1098829 - | hypothetical protein TERM 1625 1098876 - 1098863 - G 71 -3.9 -4.74103 | TCGGGAAGTGAAAAA TTTTC CGAT GAAAA AGCGTCTTCGGATGC TERM 1626 1099473 - 1099498 + r 85 -10.3 -4.11183 | opp_overlap 1099459 1099474, overlap 1099474 ATGACCGAAACAGAA ACGCCCCACCA AAAC TGGCGGGGCGC TTATTTGTGGTGCAA TERM 1627 1099497 - 1099474 - R 100 -16 -4.35044 | opp_overlap 1099474 1099473, overlap 1099459 TGACCGAAACAGAAA CGCCCCACCA AAAC TGGCGGGGCG CTTATTTGTGGTGCA TERM 1628 1099474 - 1099497 + r 95 -13.8 -3.06228 | opp_overlap 1099459 1099474, overlap 1099473 TGACCGAAACAGAAA CGCCCCACCA AAAC TGGCGGGGCG CTTATTTGTGGTGCA Ctha_0923 1100099 - 1099548 - | dTDP-4-dehydrorhamnose 3,5-epimerase TERM 1629 1099812 - 1099830 + g 100 -9.6 -5.02074 | opp_overlap 1099812 CGTTAGGCCAAACCA CTTGCCAA ATG TTGGCGAG TTTTTTCGCAAATCG Ctha_0924 1101187 - 1100126 - | uroporphyrinogen decarboxylase Ctha_0925 1101526 - 1101317 - | hypothetical protein Ctha_0926 1102960 - 1101593 - | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 1630 1102587 - 1102570 - G 71 -6.9 -4.13814 | AAAATCCAGAAAGAA GCGGATC CGTT GAGCCGC TGATGATAAGGTTTC TERM 1631 1103196 - 1103153 - R 100 -15 -3.66401 | opp_overlap 1103159, overlap 1103159 GCCAGAAATGAAATA TAAAAAGGCAATTTAGTG AGCCGAAG CACTAAATTGCCTTTTCA ACTGCTGTGAAAAAT TERM 1632 1103159 - 1103190 + r 90 -11.8 -4.16279 | opp_overlap 1103153 1103159 AATGAAATATAAAAA GGCAATTTAGTG AGCCGAAG CACTAAATTGCC TTTTCAACTGCTGTG TERM 1633 1103190 - 1103159 - R 100 -11.8 -5.23644 | opp_overlap 1103159, overlap 1103153 AATGAAATATAAAAA GGCAATTTAGTG AGCCGAAG CACTAAATTGCC TTTTCAACTGCTGTG Ctha_0927 1103504 - 1103262 - | hypothetical protein TERM 1634 1103653 - 1103672 + H 80 -5.8 -5.09426 | gap 1 CGAATGAAGCATTTT TTGTCTTGC GCG GCAAG-CAA TTTTTTGAACTTCAA TERM 1635 1103854 - 1103873 + G 76 -9.4 -3.77196 | opp_overlap 1103852 GAAGGACATACGATG TTTGTTCC TGAA GGAACAAA TTTGCTGACTGCTGC TERM 1636 1104066 - 1104037 - g 82 -8 -4.56597 | gap 1, opp_overlap 1104057 CGTGGGTTTCAAAAA GAGCTTCAGGAAA AGAAG TTCCCTGA-GCTC AGGCTCTCATGCCAA Ctha_0928 1103797 - 1104123 + | ferredoxin Ctha_0929 1104289 - 1105689 + | cytochrome bd ubiquinol oxidase subunit I Ctha_0930 1105718 - 1106797 + | cytochrome d ubiquinol oxidase, subunit II TERM 1637 1106839 - 1106824 - f 87 -10.4 -4.21194 | opp_overlap 1106824 CGCTATTACGCAAAA GGCTGC CTTA GCAGCC TTTTACCTAAAAAGG TERM 1638 1106824 - 1106839 + F 85 -10.4 -4.18018 | opp_overlap 1106824 CGCTATTACGCAAAA GGCTGC CTTA GCAGCC TTTTACCTAAAAAGG Ctha_0931 1107004 - 1108119 + | hypothetical protein Ctha_0932 1108998 - 1108183 - | Diaminopimelate epimerase TERM 1639 1109116 - 1109126 + G 85 -6.8 -5.01858 | TCCTTTTCTCTGTAT GCGA TTT TCGC TTCTTTTTTTCTTTA Ctha_0933 1109114 - 1111000 + | hypothetical protein TERM 1640 1111144 - 1111120 - f 76 -10.3 -2.54193 | opp_overlap 1111119 1111120, overlap 1111135 GATTATTCTAATTTA TTTATTTAGAT TAA ATCTAAATAAA ATTTAGAAACATAAA TERM 1641 1111120 - 1111144 + F 76 -10.3 -2.72511 | opp_overlap 1111120 1111135, overlap 1111119 GATTATTCTAATTTA TTTATTTAGAT TAA ATCTAAATAAA ATTTAGAAACATAAA Ctha_0934 1111171 - 1111509 + | hypothetical protein Ctha_0935 1111733 - 1112260 + | flavodoxin Ctha_0936 1112562 - 1112756 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Ctha_0937 1113431 - 1112826 - | hypothetical protein TERM 1642 1112924 - 1112939 + g 73 -4.6 -4.85599 | opp_overlap 1112917, overlap 1112922 1112920 1112925 CAAAAACTTGCCAGC CGCAGC AGCC GCTGCA TTTTTGTGAAGTAAG Ctha_0938 1114129 - 1113467 - | iron (metal) dependent repressor, DtxR family Ctha_0939 1115406 - 1114393 - | glycosyl transferase family 2 TERM 1643 1116290 - 1116265 - g 71 -9.7 -3.17075 | gap 1, opp_overlap 1116256 GCCGCGCCAAGCCAA GCGCGTTCGGCG CAT CGGCGAA-GCGC ATTGGCACGATGTGA TERM 1644 1116295 - 1116333 + G 71 -10.3 -2.62928 | gap 1, overlap 1116256 1116294 1116292 CGGCGAAGCGCATTG GCACGATGTGA-TCGGCG AGCG CGTCGACTCGCGCCGTGC GTATCTTTGTCATTT TERM 1645 1116982 - 1116992 + G 81 -8.2 -4.39166 | opp_overlap 1116979 1116982, overlap 1116981 GCTGTTGGAAATGCA GCGC AAC GCGC TTTTAATGTATACAA TERM 1646 1117005 - 1117018 + G 70 -2.3 -5.01732 | CGCTTTTAATGTATA CAAGC TGCG GCTGG TTTTTTGACGAAATT Ctha_0940 1115726 - 1118146 + | glycoside hydrolase family 57 TERM 1647 1118164 - 1118183 + T 91 -8.5 -5.12707 | opp_overlap 1118164 GCTTCCATAAAAAAA GCGCCTC TCCAAC GGGGCGC TTTTTTACAATTTCA TERM 1648 1118183 - 1118164 - T 89 -6.3 -5.60993 | opp_overlap 1118164 GCTTCCATAAAAAAA GCGCCTC TCCAAC GGGGCGC TTTTTTACAATTTCA Ctha_0941 1119119 - 1118238 - | CRISPR-associated RAMP protein, Cmr1 family TERM 1649 1118610 - 1118637 + g 81 -5.1 -5.2197 | gap 1, overlap 1118606 TGTTGTCGGCATTTC GAATGATTCAAA ATCAA TTTGA-TCATTC TTTTTGATTTTTGTA TERM 1650 1119022 - 1119012 - G 79 -8.2 -4.26903 | opp_overlap 1119012 1119011 TGCACGCCACCAAAA GCGC AAT GCGC CTTTAATAGATTGCG Ctha_0942 1120528 - 1119116 - | CRISPR-associated RAMP protein, Cmr6 family TERM 1651 1120042 - 1120053 + g 75 -3 -5.24531 | TTCCAAAGCCTTCCT TTTC TACT GAAA TTTTTTCTGACAAAT Ctha_0943 1120943 - 1120530 - | CRISPR-associated protein, Cmr5 family Ctha_0944 1121927 - 1120956 - | CRISPR-associated RAMP protein, Cmr4 family TERM 1652 1121639 - 1121609 - G 89 -9 -4.67038 | gap 1, opp_overlap 1121634 CGGGGAAAAGCAAAA GCCGG-GCATCGG TAAAAC CCAACGCGCCGGC ATGTCCGTCATTTCC Ctha_0945 1123328 - 1121940 - | hypothetical protein Ctha_0946 1124386 - 1123328 - | CRISPR-associated protein, Cmr3 family Ctha_0947 1126262 - 1124379 - | CRISPR-associated protein, Crm2 family TERM 1653 1125282 - 1125293 + g 71 -3.6 -4.87133 | TCGTTCTTTGATTTT GCCT TGTT GGGC TTTTATTTCCGAGAT TERM 1654 1125539 - 1125525 - G 74 -3.5 -5.00884 | overlap 1125526 ACCTTTTTTAAAAAA CCGCT TTACG AGCGA AACGGCGCTTAAGGC TERM 1655 1125654 - 1125644 - G 91 -8.2 -5.0133 | opp_overlap 1125653 CAGGGCGGTAAAAAA GCGC ATT GCGC TCGCCATCGAGTGAG TERM 1656 1125930 - 1125917 - G 74 -5.9 -4.60487 | opp_overlap 1125909 CAGTACCTTTAAAAA CGGGC GGTG ACCCG GACTGTTTTTGAATT TERM 1657 1125993 - 1126003 + g 70 -2.4 -5.00616 | AATTTCCATCCATTT CGCC TGA GCCG TTTTTTCCACAGCCG TERM 1658 1126076 - 1126091 + g 73 -7.6 -4.18018 | opp_overlap 1126075 TCGCCAAAAACCGAT TCGGTT TTGC AACCGA TTTTGCATCGGGAAC TERM 1659 1126519 - 1126555 + r 76 -8.9 -3.74693 | opp_overlap 1126511 1126527, overlap 1126527 AAACTGATTGAATGT CAAAAAAAGCAAGGT TGGTTTT GCCTTGCTTTTTCTG TTTGGTGCGGTGAAG TERM 1660 1126527 - 1126547 + r 79 -4.7 -5.22289 | opp_overlap 1126527, overlap 1126519 TGAATGTCAAAAAAA GCAAGGT TGGTTTT GCCTTGC TTTTTCTGTTTGGTG TERM 1661 1126547 - 1126527 - R 79 -4 -5.47399 | opp_overlap 1126527 1126519 TGAATGTCAAAAAAA GCAAGG TTGGTTTTG CCTTGC TTTTTCTGTTTGGTG Ctha_0948 1127512 - 1126640 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 1662 1126892 - 1126876 - G 87 -7.3 -5.1356 | opp_overlap 1126876, overlap 1126877 CCGCAGCAACAAAAA CGCCATT TGC AATGGCA TGGCTTTTTTGAATG TERM 1663 1126891 - 1126877 - G 72 -8.6 -3.67413 | opp_overlap 1126876, overlap 1126876 CGCAGCAACAAAAAC GCCATT TGC AATGGC ATGGCTTTTTTGAAT TERM 1664 1127421 - 1127436 + g 79 -3.2 -5.35222 | opp_overlap 1127421 TGTTCGGCGGCCAAA CGAATC TGCT GAATCG TTTTTTCTAAATTTT TERM 1665 1127678 - 1127651 - R 81 -11.5 -2.71712 | opp_overlap 1127657, overlap 1127637 1127650 1127657 1127671 TTTTTTTCGGTAAAC GAAAAACGCTT TGCAAG AAGCGTTTTTC CGGTGTCAAAACGAG TERM 1666 1127657 - 1127672 + r 72 -5.4 -4.64766 | opp_overlap 1127651 1127650 1127657 1127671 TCGGTAAACGAAAAA CGCTTT GCAA GAAGCG TTTTTCCGGTGTCAA TERM 1667 1127672 - 1127657 - R 74 -4.7 -4.98531 | opp_overlap 1127657, overlap 1127651 1127650 1127671 TCGGTAAACGAAAAA CGCTT TGCAAG AAGCG TTTTTCCGGTGTCAA Ctha_0949 1128604 - 1127684 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 1668 1128346 - 1128367 + g 72 -6.5 -4.33151 | gap 1 CGCGCGTAGGTCCAA GGCGTTCGGC GGT GTCGG-CGCC TTTTCGGTTGTCATA TERM 1669 1128475 - 1128461 - G 87 -10 -4.2349 | TGGCCATAGCGAAAA CTTGCC ATC GGCAAG CGCTAATGCAGCGCC TERM 1670 1128512 - 1128522 + g 71 -6.8 -4.08216 | opp_overlap 1128499 1128496 AACCGGCATGGCGCC CGCT GGA AGCG TTTTAGGCCGGATGG TERM 1671 1128743 - 1128726 - R 100 -12.7 -4.05446 | overlap 1128694 TGGTTGAATCACAAA CTCCGGC TTTC GCCGGAG TGGCAAGAAAGCAAG Ctha_0950 1129848 - 1128805 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 1672 1130025 - 1129973 - R 100 -9.5 -5.61881 | gap 1, opp_overlap 1130011, overlap 1129975 1130012 1130013 1130015 TTGCAAAAACAAAAA GATTACCAAAGCTGATATCTTCAT TCGATC AAGAAAACATCAGCTTTGGCAA-C GCTTAAAAAGCATTG TERM 1673 1130024 - 1129975 - R 100 -13.2 -4.43511 | opp_overlap 1130011, overlap 1129973 1130012 1130013 1130015 GCAAAAACAAAAAGA TTACCAAAGCTGATATCTTCAT TCGATC AAGAAAACATCAGCTTTGGCAA CGCTTAAAAAGCATT TERM 1674 1130049 - 1130013 - R 73 -9.5 -2.97725 | opp_overlap 1130011 1130026, overlap 1129975 1129973 1130012 1130015 CGATCAAGAAAACAT CAGCTTTGGCAACGCTT AAA AAGCATTGTAAAAGCCG GCTAATTATATAATT Ctha_0951 1130429 - 1130100 - | hypothetical protein TERM 1675 1131687 - 1131706 + G 78 -5.6 -4.77173 | CGGTTTGCCGGTCAG CGAAGGGC AATC GCCTATCG TTTATTTTCTCGGCA Ctha_0952 1130995 - 1131795 + | Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase Ctha_0953 1131847 - 1133877 + | TonB-dependent receptor Ctha_0954 1133874 - 1135034 + | transport system permease protein TERM 1676 1135410 - 1135388 - g 80 -5.4 -5.00884 | overlap 1135390 AGGCCGGGCAAAAAA GATCGCGCGG TTG CCGCCCAAGC CCTCGAGCTGCTTGA Ctha_0955 1135028 - 1135831 + | ABC transporter-related protein TERM 1677 1136428 - 1136411 - g 72 -5.6 -4.45738 | overlap 1136421 GACTGGAACAACAAA CGCAAA GAACGA TTTGCG AAAAATCCTCCTGAA Ctha_0956 1135916 - 1136530 + | Methyltransferase type 11 Ctha_0957 1136544 - 1137644 + | periplasmic binding protein TERM 1678 1138533 - 1138521 - g 79 -7.7 -4.42667 | TTAAAACCAGCAAAA TGGCA GAA TGCCA GCCGCTCATCGATTT TERM 1679 1138585 - 1138574 - g 74 -7.2 -4.33739 | CAAAAAATGCGAAAA GCGC TCCG GCGC GGCAATTTTCAAATG Ctha_0958 1137665 - 1138738 + | hypothetical protein Ctha_0959 1138762 - 1139454 + | cobalamin synthesis protein P47K TERM 1680 1139503 - 1139490 - g 72 -6.7 -4.20288 | opp_overlap 1139499 1139500, overlap 1139500 GAAAAGGAAATTAAA TCGGT AAAA ACCGA ACTGCCGCAGCTGAT TERM 1681 1139521 - 1139500 - g 74 -5.7 -4.64657 | opp_overlap 1139500 1139499, overlap 1139490 TTAAATCGGTAAAAA CCGAACTGC CGCA GCTGATCGG GTTTTTCGGCAACTA Ctha_0960 1139451 - 1140461 + | ABC transporter-related protein TERM 1682 1140534 - 1140486 - f 76 -5.5 -4.98255 | gap 3, opp_overlap 1140487 1140488 1140489, overlap 1140489 1140491 GCCCAACCATAAAAA TAAGTGAAGCAA-CCTGCGCCTCG CCCA CGAAG-GCAGGGTTGCTTCGCC-A TTTTTGTGAAAGGTT TERM 1683 1140487 - 1140534 + F 72 -4.9 -4.84017 | opp_overlap 1140486 1140489 1140491, overlap 1140488 1140489 CCCAACCATAAAAAT AAGTGAAGCAACC-TGCGCCTCG CCCA CGAAG-GCAGGGTTGCTTCGCCA TTTTTGTGAAAGGTT TERM 1684 1140488 - 1140533 + F 71 -8.4 -3.49687 | opp_overlap 1140486 1140489 1140491, overlap 1140487 1140489 CCAACCATAAAAATA AGTGAAGCAACC-TGCGCCTCG CCCA CGAAG-GCAGGGTTGCTTCGCC ATTTTTGTGAAAGGT TERM 1685 1140489 - 1140532 + F 85 -11.9 -2.6933 | opp_overlap 1140486 1140489 1140491, overlap 1140488 1140487 CAACCATAAAAATAA GTGAAGCAACC-TGCGCCTCG CCCA CGAAG-GCAGGGTTGCTTCGC CATTTTTGTGAAAGG TERM 1686 1140532 - 1140489 - f 100 -11.9 -4.58563 | opp_overlap 1140489 1140488 1140487, overlap 1140486 1140491 CAACCATAAAAATAA GTGAAGCAA-CCTGCGCCTCG CCCA CGAAG-GCAGGGTTGCTTCGC CATTTTTGTGAAAGG TERM 1687 1140530 - 1140491 - f 91 -13.1 -2.5848 | opp_overlap 1140489 1140488 1140487, overlap 1140489 1140486 ACCATAAAAATAAGT GAAGCAA-CCTGCGCCTCG CCCA CGAAG-GCAGGGTTGCTTC GCCATTTTTGTGAAA TERM 1688 1141145 - 1141168 + G 77 -10.4 -3.34894 | gap 1, overlap 1141143 1141153 1141159 TGAGCGATTTTGTTT GGCGCATTTCG GGG CGAAAT-CGCC TATTTCCGCCGACTT TERM 1689 1141236 - 1141249 + G 72 -5.3 -4.65895 | AATTCAAGATTTTCC GAAAC TGGC GTTTC TTTTTGAATCGACAA TERM 1690 1141766 - 1141755 - g 74 -5.8 -4.60041 | ATTTATTTTGAAAAA TGCG CTGC CGCA TTGCCAATCGAATTC TERM 1691 1141922 - 1141908 - g 76 -2.1 -5.42259 | gap 1, opp_overlap 1141908 1141909, overlap 1141909 CTATGCGGAAAAAAA GCGCGA GGTT TCG-GC GTTTATTTTAAACTA Ctha_0961 1140718 - 1142214 + | amine oxidase TERM 1692 1142297 - 1142309 + F 70 -4.9 -4.63932 | TTTGCGAAAACGATT TTACA ACC TGTAA TTTTCTTGCCCGATA TERM 1693 1142827 - 1142801 - g 89 -9.4 -4.60258 | opp_overlap 1142805 1142806, overlap 1142806 TTATCAAAGAAGAAA TAAAAGCGCCCG ATT CCGGCGCGTTTA ATTGGACGGAAGTTC TERM 1694 1142822 - 1142806 - g 100 -9.3 -5.20331 | opp_overlap 1142805 1142806, overlap 1142801 AAAGAAGAAATAAAA GCGCCCG ATT CCGGCGC GTTTAATTGGACGGA Ctha_0962 1142326 - 1143786 + | glycyl-tRNA synthetase TERM 1695 1143812 - 1143862 + T 100 -10.5 -5.66926 | opp_overlap 1143812 TTTGAAAGCGACAAA CGCCTTAGCACACGCAGTCATGT TTTCT ACATGAGCGAGTTTGTTAAGGCG TTTTCTTTTTTTTCG TERM 1696 1143862 - 1143812 - T 85 -10.5 -4.02132 | opp_overlap 1143812 TTTGAAAGCGACAAA CGCCTTAGCACACGCAGTCATGT TTTCT ACATGAGCGAGTTTGTTAAGGCG TTTTCTTTTTTTTCG Ctha_0963 1144279 - 1143980 - | hypothetical protein TERM 1697 1144396 - 1144384 - H 78 -5.5 -5.08824 | GTTTTATTCAAAAAA GGGTA CGG CACCC TTGCACTGCTTTGAC TERM 1698 1144641 - 1144670 + G 73 -4.3 -4.77036 | gap 1 AAGCGACGCTGCTAT TTTG-GGCGGTGCT GAA AGCGTTGCCACGAA TTTTTCGTGATAGAA TERM 1699 1144799 - 1144817 + G 76 -8.8 -3.7282 | opp_overlap 1144799 GCGTACCAAATGAAA GGCTTGGC GCC GCTGAGCC TTGTTGGTGGAATCA Ctha_0964 1144589 - 1145335 + | protein of unknown function DUF140 Ctha_0965 1146074 - 1145574 - | hypothetical protein TERM 1700 1147048 - 1147058 + G 91 -8.2 -5.04249 | opp_overlap 1147045 1147048 TAAGCTGATTAATGA GGCC GGT GGCC TTTCTTTTTTAGCGC Ctha_0966 1146476 - 1147330 + | PHP domain protein TERM 1701 1147501 - 1147487 - g 72 -2.8 -5.00616 | overlap 1147489 CCTTCTTTCAAAAAA GAGCTA TCG TAGCTG GACGGAGATTCAAAA TERM 1702 1147617 - 1147630 + G 75 -3.1 -5.15969 | CCGCCGTTTAAGAAA TCCGA AATT TTGGA TTTTTTGCATTCCGA Ctha_0967 1147380 - 1147697 + | hypothetical protein Ctha_0968 1148347 - 1147694 - | Rhomboid family protein TERM 1703 1147732 - 1147720 - G 79 -4.1 -5.14965 | ATTGCGACCAAAAAA TCTGC AGC ACAGA AGGATTTTGCACAAC TERM 1704 1148423 - 1148396 - R 100 -10.6 -5.60993 | gap 1, opp_overlap 1148396 TGCTGCATAAAAAAA GCGAACGA-GGCA GGT TGCCGCCGCTCGC TTTTTTAGAAAAATT TERM 1705 1148396 - 1148423 + r 79 -6.2 -5.01732 | gap 1, opp_overlap 1148396 TGCTGCATAAAAAAA GCGAAC-GAGGCA GGT TGCCGCCGCTCGC TTTTTTAGAAAAATT Ctha_0969 1149193 - 1148513 - | hypothetical protein TERM 1706 1149306 - 1149327 + r 70 -5.1 -4.56597 | opp_overlap 1149298 ATAGAAAGCGCGGTT TCACCGAAC TCAA GATTGGTGA TTTTTGCAAGGGAGA TERM 1707 1149332 - 1149360 + r 70 -7.5 -3.6269 | opp_overlap 1149341, overlap 1149330 AAGATTGGTGATTTT TGCAAGGGAGA AATAACA TCTCCCTTACA TATTTGTGTGGATAA Ctha_0970 1150140 - 1149415 - | short-chain dehydrogenase/reductase SDR TERM 1708 1150215 - 1150242 + r 78 -5.6 -5.03314 | opp_overlap 1150214 1150215, overlap 1150203 GATGCGTTAGAAAAT CAACCGCGTTTT TGTG AAAAGGCAGTTG TTTTTTGAGCGTAAA Ctha_0971 1150647 - 1150270 - | hypothetical protein Ctha_0972 1150846 - 1151385 + | BioY protein TERM 1709 1151462 - 1151437 - f 79 -7.7 -4.28069 | opp_overlap 1151437 ATAGAATTCAACAAA GCGCTTTTT CAAAAGGC AAAAAGCGC TTTTTTTACGCCAGC TERM 1710 1151437 - 1151462 + F 100 -7.7 -5.40072 | opp_overlap 1151437 ATAGAATTCAACAAA GCGCTTTTT CAAAAGGC AAAAAGCGC TTTTTTTACGCCAGC Ctha_0973 1151506 - 1151880 + | iron-sulfur cluster assembly accessory protein TERM 1711 1151914 - 1151942 + T 89 -3.9 -5.71712 | gap 1, opp_overlap 1151914 GTTTAAACATAAAAA GCTTACGCATGG AACACA CC-TACGTAAGC TTTTTTTATATAGAG TERM 1712 1151942 - 1151914 - T 84 -6.1 -5.19879 | gap 1, opp_overlap 1151914 GTTTAAACATAAAAA GCTTACGCATGG AACACA CC-TACGTAAGC TTTTTTTATATAGAG TERM 1713 1151971 - 1151987 + T 70 -2.9 -5.13722 | opp_overlap 1151974 AGATGAATGTATATG AAAGGGC AAT GCCTTTA TTTTGTTTTGATGGC Ctha_0974 1153727 - 1152246 - | phytoene desaturase TERM 1714 1152400 - 1152388 - G 72 -10.5 -2.76696 | opp_overlap 1152386 1152388 1152397, overlap 1152387 GCTGGTCGCAAGAAT GCCGC GCT GCGGC TGTTTGATGAAATGC TERM 1715 1152388 - 1152400 + g 77 -10.5 -3.4582 | opp_overlap 1152388 1152387, overlap 1152386 1152397 GCTGGTCGCAAGAAT GCCGC GCT GCGGC TGTTTGATGAAATGC TERM 1716 1153310 - 1153330 + g 79 -2.5 -5.59357 | overlap 1153325 GATTGTAGATAAAGC TTTGTGCGG TGG CGGCGTAAA TTTTTTTCGTGTAAT TERM 1717 1153613 - 1153626 + g 81 -3.7 -5.40072 | opp_overlap 1153624, overlap 1153624 1153625 ATTCCTGCATTTTTC CGCCC ACAC GAGCG TTTTTTTCAAAAACG TERM 1718 1153924 - 1153908 - g 83 -9.5 -4.10552 | TTTCAGCAAATTAAA CGCTTAT TGG ATAAGCG CCAACCCGACCTAAC TERM 1719 1154398 - 1154382 - g 76 -5.1 -4.75174 | opp_overlap 1154382, overlap 1154374 1154396 CAGCGAACCGAAAAA GGCTTTT ACG ACAAGCC TCGTTTAGACGAGGC TERM 1720 1154413 - 1154396 - g 79 -11.3 -3.40522 | opp_overlap 1154382, overlap 1154382 AGGCTTTTACGACAA GCCTCGT TTAG ACGAGGC CACTTACCAGCGCCT Ctha_0975 1153869 - 1154528 + | tRNA guanosine-2'-O-methyltransferase TERM 1721 1154533 - 1154561 + T 91 -9.6 -4.87665 | gap 1, opp_overlap 1154533, overlap 1154535 TGCGAAAATGAAAAA GACCGGA-AAGCG TTGT CGCTTATCCGGCC TTTTTGTGAATGCAG TERM 1722 1154561 - 1154533 - T 100 -11.8 -5.0925 | gap 1, opp_overlap 1154533 1154535 TGCGAAAATGAAAAA GACCGGA-AAGCG TTGT CGCTTATCCGGCC TTTTTGTGAATGCAG TERM 1723 1154535 - 1154559 + T 78 -10.8 -2.70788 | gap 1, opp_overlap 1154533, overlap 1154533 CGAAAATGAAAAAGA CCGGA-AAGCG TTGT CGCTTATCCGG CCTTTTTGTGAATGC Ctha_0976 1155735 - 1154686 - | aldo/keto reductase TERM 1724 1155107 - 1155087 - G 76 -8.1 -4.07687 | ATTTTCCGGTTAAAA GGCCGGCGC CAA GCGGCGCCC AAGGCGTAACAGCAA TERM 1725 1155873 - 1155860 - H 82 -8.1 -4.20883 | CAAAAATGTTGAAAA GCGGA AGCG TCCGC TCAGCCAAACACGGA TERM 1726 1156366 - 1156349 - g 78 -5.5 -4.8048 | TTTGGACATGAAAAA GGCGC TTTTACCG GCGCC ACTCAACTGCGAAAA TERM 1727 1157143 - 1157129 - g 74 -8.5 -3.96148 | TCGTTTTACGACAAA GCCGC TGATG GCGGC CAAGCACCTTCGTTA Ctha_0977 1156106 - 1157311 + | sigma54 specific transcriptional regulator, Fis family TERM 1728 1157417 - 1157401 - f 73 -3.7 -5.03314 | opp_overlap 1157401 GCCATTTTGAAAAAA TCCTG CTCAATT CAGGA ATTTGAATGCCGCTG TERM 1729 1158031 - 1158041 + G 72 -8.2 -3.68351 | opp_overlap 1158025, overlap 1158030 GACCGAAGAGCTGCT GCGC CGC GCGC TTTGGCTGCTGGCAA TERM 1730 1158294 - 1158323 + G 83 -4.2 -5.40072 | gap 1, overlap 1158262 CGCGTTTCAGCCAAA GC-GAGCCGGCGC AAAAC GCGGTGGTTCAGC TTTTTTTGAAGGAAA TERM 1731 1159173 - 1159163 - g 100 -8.2 -5.14563 | overlap 1159164 1159170 TTTGTCAGCAAAAAA GCGC AAA GCGC CACAATGGCCTACAC Ctha_0978 1157504 - 1159654 + | hypothetical protein TERM 1732 1159906 - 1159887 - g 72 -2.9 -5.08824 | gap 1 GTGGCATCGAAAAAA TCGCGCAA GAAAT TTG-GCGA GAATATTATCCAAGC TERM 1733 1160271 - 1160289 + G 73 -2.4 -5.1675 | TTCGGGAAGCGAATA CTTTCG ATATTGG CGAAGG TTTTTTCATGGATGA Ctha_0979 1159814 - 1160338 + | GCN5-related N-acetyltransferase Ctha_0980 1160979 - 1160356 - | NLP/P60 protein TERM 1734 1161705 - 1161724 + G 82 -7.8 -4.57073 | gap 1, overlap 1161705 1161706 GCGCATTGAAGTGTT G-CGCGGCG CGG CGTCGCGGC TTTTTGGGCCAAATG TERM 1735 1161706 - 1161722 + G 73 -11.5 -2.60032 | overlap 1161705 1161705 CGCATTGAAGTGTTG CGCGGCG CGG CGTCGCG GCTTTTTGGGCCAAA TERM 1736 1162363 - 1162384 + G 75 -9.5 -3.64487 | gap 1 TTGGAAGAGCAGCTC GCGTT-GGGA AAT TCCCTAACGC TTGTTCCAGGTGTGG TERM 1737 1162869 - 1162894 + G 71 -9.9 -3.28001 | opp_overlap 1162875, overlap 1162872 GTCGCGCTATGTGTT CAATTACTTGA AGCA TCAAGTGATTG TTGGGTTTACGCATC Ctha_0981 1161295 - 1163142 + | TonB-dependent receptor Ctha_0982 1163393 - 1163842 + | hypothetical protein TERM 1738 1164091 - 1164103 + G 89 -5.5 -5.75342 | CGTACTATGTTACCA GCGTG GCA TACGC TTTTTTTTACCGAAA Ctha_0983 1163883 - 1164827 + | membrane protease (metal dependent; CAAX family) TERM 1739 1164879 - 1164856 - T 86 -11.1 -4.10437 | opp_overlap 1164856 GGATGAATGAAACAA GCCCTGTAT TTTGAG ATACAGGGC TTTATTTATTGGTTA TERM 1740 1164856 - 1164879 + T 100 -11.8 -4.73297 | opp_overlap 1164856 GGATGAATGAAACAA GCCCTGTATT TTGA GATACAGGGC TTTATTTATTGGTTA Ctha_0984 1166103 - 1164892 - | conserved hypothetical lipoprotein Ctha_0985 1168479 - 1166152 - | TonB-dependent receptor plug TERM 1741 1168605 - 1168638 + r 83 -9.7 -3.97834 | opp_overlap 1168606 1168612, overlap 1168606 1168612 TAAGAGAGAGAAAAG AGAAAAAGCAGCC ATTCATTG GGCTGCTTTTTCA TTTGTGATGCGGTTG TERM 1742 1168637 - 1168606 - R 100 -13.2 -3.94184 | opp_overlap 1168605 1168606 1168612, overlap 1168612 AAGAGAGAGAAAAGA GAAAAAGCAGCC ATTCATTG GGCTGCTTTTTC ATTTGTGATGCGGTT TERM 1743 1168606 - 1168637 + r 95 -13.2 -2.98219 | opp_overlap 1168606 1168612, overlap 1168605 1168612 AAGAGAGAGAAAAGA GAAAAAGCAGCC ATTCATTG GGCTGCTTTTTC ATTTGTGATGCGGTT TERM 1744 1168612 - 1168631 + r 83 -6.4 -5.05505 | opp_overlap 1168606 1168612, overlap 1168606 1168605 GAGAAAAGAGAAAAA GCAGCC ATTCATTG GGCTGC TTTTTCATTTGTGAT TERM 1745 1168631 - 1168612 - R 88 -6.4 -5.32599 | opp_overlap 1168612 1168606 1168605, overlap 1168606 GAGAAAAGAGAAAAA GCAGCC ATTCATTG GGCTGC TTTTTCATTTGTGAT Ctha_0986 1169858 - 1168659 - | conserved hypothetical lipoprotein Ctha_0987 1172225 - 1169880 - | TonB-dependent receptor plug TERM 1746 1170144 - 1170162 + g 79 -7.4 -4.44245 | opp_overlap 1170144 GAAGAGTTTTAAGAA TGTGCCTG CGC CAAGCACA TTTTCTCGGTGATAT TERM 1747 1170162 - 1170144 - G 75 -9.6 -3.65201 | opp_overlap 1170144 GAAGAGTTTTAAGAA TGTGCCTG CGC CAAGCACA TTTTCTCGGTGATAT TERM 1748 1171206 - 1171193 - G 75 -9.5 -3.64487 | TCAGATTGGGAATAA CCGCG CTGG CGCGG GATTCGGCAAACTGT TERM 1749 1172220 - 1172207 - G 95 -2.4 -6.02914 | opp_overlap 1172207 GGGATACAAAAAAAA TCGA AAAGAA TCGA TACATTTTTATTAAT TERM 1750 1172838 - 1172811 - g 76 -4 -5.00616 | overlap 1172812 1172815 CTTTTCGTGAAAAAA TTGAGCGCGGAG AAAC CTGCGCGCTTAG CAATTATGATTATTG Ctha_0988 1172348 - 1173355 + | transcriptional regulator, AraC family Ctha_0989 1173406 - 1174389 + | transcriptional regulator, AraC family TERM 1751 1174443 - 1174395 - T 76 -2.6 -5.49809 | gap 3, opp_overlap 1174402 1174408, overlap 1174384 1174400 1174402 1174407 1174408 GAAAGCTTAAAAAAA GCAAAGCGAAG-A--GCCCGCTA AAACCA CAGCGGGTTGTTCTTCGCTTCGC TCCAGGAGAAAGGTG Ctha_0990 1175246 - 1174482 - | hypothetical protein TERM 1752 1174694 - 1174713 + g 70 -2.2 -4.93296 | gap 1, overlap 1174695 AAACGCGCTTATTGT TGAAAAGCG GCT CG-TTTTCG TTTTTGTCCTCATCC Ctha_0991 1177509 - 1175269 - | TonB-dependent receptor TERM 1753 1176294 - 1176284 - G 72 -3.2 -5.01042 | AAGGTAAAGTAAAAA TCGC CTT GCAA AACATAGTCAGTGCT Ctha_0992 1178225 - 1177512 - | hypothetical protein TERM 1754 1177982 - 1177966 - G 75 -2.9 -5.14563 | opp_overlap 1177976 1177978 1177979 TTGGTCATCAAAAAA CCGGA GGTGATG CCCGG ACAAATATGTCCGGT TERM 1755 1177979 - 1177996 + g 77 -11.3 -3.24411 | opp_overlap 1177966, overlap 1177978 1177976 AACCGGAGGTGATGC CCGGACA AATA TGTCCGG TGTATTTACCAACAT TERM 1756 1178293 - 1178321 + r 79 -4 -5.40004 | opp_overlap 1178294 1178301, overlap 1178294 1178301 AATAAAATACGCCAA ATAAAAAAGCAA ATGAA TTGCTTTTTTGA TTTTTTAATTTCCTG TERM 1757 1178294 - 1178320 + r 72 -7.5 -3.82375 | opp_overlap 1178294 1178301, overlap 1178293 1178301 ATAAAATACGCCAAA TAAAAAAGCAA ATGAA TTGCTTTTTTG ATTTTTTAATTTCCT TERM 1758 1178313 - 1178301 - R 81 -3.4 -5.64421 | opp_overlap 1178301 1178294 1178293, overlap 1178294 ACGCCAAATAAAAAA GCAA ATGAA TTGC TTTTTTGATTTTTTA TERM 1759 1178301 - 1178313 + r 81 -3.4 -5.59502 | opp_overlap 1178294 1178301, overlap 1178294 1178293 ACGCCAAATAAAAAA GCAA ATGAA TTGC TTTTTTGATTTTTTA Ctha_0993 1179262 - 1178402 - | protein of unknown function DUF6 transmembrane TERM 1760 1179168 - 1179142 - G 79 -8.6 -4.35524 | overlap 1179110 1179143 TTTGCAAACCTAAAA GCAGCAGCACCG GTC CAGCGATGCCGC CGAATCCAATTGCGC TERM 1761 1179313 - 1179327 + r 76 -2.8 -5.36441 | overlap 1179315 GCTTGAAAGGCGGAA TGCTAC TGA GTAGGA TTTTTTCTATCGGCG Ctha_0994 1180064 - 1179438 - | Methyltransferase type 11 TERM 1762 1179542 - 1179572 + g 72 -6.1 -4.19817 | gap 1 TATCGCAGGTGTGTT CCA-CCGTTAGCGT TTGT GCGCCAGCGGGTGG TTTTCCATAGGTGCG Ctha_0995 1181112 - 1180084 - | hypothetical protein TERM 1763 1181443 - 1181422 - R 82 -11.7 -3.01712 | opp_overlap 1181424, overlap 1181424 GTGTTGCGGTGAATA TAGGGCATT TTGC AATGCCCTA ATTCGAAATAAAACA TERM 1764 1181424 - 1181441 + r 74 -9.9 -2.72344 | opp_overlap 1181424 1181422 GTTGCGGTGAATATA GGGCATT TTGC AATGCCC TAATTCGAAATAAAA TERM 1765 1181441 - 1181424 - R 76 -9.9 -3.06696 | opp_overlap 1181424, overlap 1181422 GTTGCGGTGAATATA GGGCATT TTGC AATGCCC TAATTCGAAATAAAA Ctha_0996 1181693 - 1181475 - | hypothetical protein TERM 1766 1181859 - 1181832 - R 77 -6.3 -4.77925 | gap 1, opp_overlap 1181832, overlap 1181833 1181834 AAAAAATGTGAAAAA GCCGAGGAACCC GACCT GGTTTCCTC-GC ACTAAATTCACACAA TERM 1767 1181858 - 1181834 - R 74 -10 -2.64962 | opp_overlap 1181832, overlap 1181832 1181833 AAAATGTGAAAAAGC CGAGGAACCC GACCT GGTTTCCTCG CACTAAATTCACACA Ctha_0997 1182770 - 1181940 - | O-methyltransferase domain protein TERM 1768 1182533 - 1182543 + g 74 -5.4 -4.58283 | TGGGCAAAGGATGTT GTTC GAT GAAC TTTTTCACCACATTA Ctha_0998 1184569 - 1182818 - | ABC transporter-related protein TERM 1769 1184234 - 1184246 + g 76 -4.7 -4.83169 | opp_overlap 1184221 GACGGACGCCAAATC GCCCG GAT CGCGC TTTTTGTAAAAGCCT Ctha_0999 1186685 - 1184925 - | ABC transporter-related protein TERM 1770 1185352 - 1185364 + g 88 -3.3 -5.75342 | opp_overlap 1185353, overlap 1185337 1185353 TTCGCTGCGGCAATC ACCTC GGC GAGGC TTTTTTTTGCGCCCA TERM 1771 1185353 - 1185363 + g 71 -6.8 -4.04482 | opp_overlap 1185353, overlap 1185337 1185352 TCGCTGCGGCAATCA CCTC GGC GAGG CTTTTTTTTGCGCCC TERM 1772 1186477 - 1186466 - G 71 -7.2 -4.07246 | overlap 1186454 TCAGCGCAAACGAAA GCGC CACC GCGC CCAGCGCCCACGCCA TERM 1773 1186575 - 1186564 - G 71 -7.2 -4.04413 | AATACGATGAAATAA GGCG TTAG CGCC AGAATAGCGTGCAAA TERM 1774 1186872 - 1186839 - R 100 -11.9 -5.07652 | opp_overlap 1186839 GCTTGTAAAAGAAAA CTGGCTATTAGCA AATAATGA TGCCAATAGCCAG TTTGTGAGATAATAT TERM 1775 1186839 - 1186872 + r 83 -9.7 -3.90586 | opp_overlap 1186839 GCTTGTAAAAGAAAA CTGGCTATTAGCA AATAATGA TGCCAATAGCCAG TTTGTGAGATAATAT Ctha_1000 1188086 - 1186887 - | conserved hypothetical lipoprotein TERM 1776 1187288 - 1187302 + g 71 -7.8 -3.91072 | opp_overlap 1187287 TGCTGAAGTAATAGT CCGGGT CCC ACTCGG TTTCTCCCGCTTTAA TERM 1777 1188075 - 1188085 + g 83 -4 -5.30448 | opp_overlap 1188075, overlap 1188062 TGTTCGTATACGATA TGAA TGT TTCA TTTTTATGTTTGTTT Ctha_1001 1190461 - 1188125 - | TonB-dependent receptor plug TERM 1778 1191442 - 1191427 - g 86 -4 -5.48825 | GAGCACGCAAAAAAA CTTCTC TTGG AAGAAG GCTTGGCGATCAGCG TERM 1779 1191536 - 1191520 - g 95 -10.9 -4.56914 | GCATTTAAACGAAAA TTTGGCG TTG CGCCAAA GCAGTTAAAGCAAAA Ctha_1002 1190566 - 1191558 + | transcriptional regulator, AraC family TERM 1780 1191925 - 1191948 + F 74 -6 -4.59069 | opp_overlap 1191925 1191920, overlap 1191920 1191927 GTTACATAAGTAAAT CCGATGCTTA TTTT TAAGCGTCCG TTTTATAATTGTGAT Ctha_1003 1192050 - 1194371 + | TonB-dependent siderophore receptor TERM 1781 1194379 - 1194409 + F 89 -4 -5.81412 | opp_overlap 1194382, overlap 1194382 AATATTAATCATATT TAAGCAGTCTGT AATTAGC GCAGGCTGCTTC TTTTTTTTGAATAAG TERM 1782 1194382 - 1194406 + F 76 -5.7 -4.97383 | opp_overlap 1194382, overlap 1194379 ATTAATCATATTTAA GCAGTCTGT AATTAGC GCAGGCTGC TTCTTTTTTTTGAAT TERM 1783 1195173 - 1195157 - g 100 -8.1 -5.1287 | overlap 1195167 TTGAGATTTAAAAAA GGAAAAA CTA TTTTTCC CTACAAGAAAAATTT Ctha_1004 1194446 - 1195882 + | PepSY-associated TM helix domain protein Ctha_1005 1196533 - 1195967 - | hypothetical protein Ctha_1006 1197567 - 1196536 - | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 1784 1197019 - 1197029 + g 73 -4.6 -4.74103 | overlap 1197018 1197027 AAAGTCAAGCAATGG CGCG AGG TGCG TTTTTGCCTTCGGCG TERM 1785 1199250 - 1199233 - g 79 -4.1 -5.16151 | overlap 1199237 1199238 CAAATGGAAGAAAAA CAACCCA AAAC TGGATCG GTTTTGCCCAAGAGG Ctha_1007 1197951 - 1200086 + | TonB-dependent receptor plug Ctha_1008 1200105 - 1200719 + | hypothetical protein TERM 1786 1200812 - 1200839 + F 100 -13.5 -6.01369 | opp_overlap 1200812 1200814 TTTTCTCCTGATACA TAGCCTCGGAG GTGACG CTCCGGGGCTA TTTTTTTATTATTTC TERM 1787 1200839 - 1200812 - f 78 -11.3 -2.87132 | opp_overlap 1200812, overlap 1200814 TTTTCTCCTGATACA TAGCCTCGGAG GTGACG CTCCGGGGCTA TTTTTTTATTATTTC TERM 1788 1200837 - 1200814 - f 73 -9.5 -2.98823 | opp_overlap 1200812, overlap 1200812 TTCTCCTGATACATA GCCTCGGAG GTGACG CTCCGGGGC TATTTTTTTATTATT Ctha_1009 1201076 - 1201483 + | GCN5-related N-acetyltransferase Ctha_1010 1201523 - 1201669 + | hypothetical protein TERM 1789 1201775 - 1201746 - f 71 -4.3 -4.79756 | gap 1, opp_overlap 1201746 TATACAATTCAAAAA TGGTTATTCGCAGG CGT CTTGCGGA-AACCA TATCATCTATGTTAT Ctha_1011 1201811 - 1201996 + | hypothetical protein TERM 1790 1202349 - 1202328 - g 72 -3.1 -5.08255 | ATTTTGAAAAGAAAA GAATTAAAA TTTC TTTCAATCC ATTAGCCGTTGATGA TERM 1791 1203199 - 1203173 - g 70 -2.2 -5.08878 | opp_overlap 1203176, overlap 1203168 1203176 AAGACACAAATAAAA CATTACGTTTCA AAA TGGTACGTATTG TCAACCTTGACAAGT Ctha_1012 1202012 - 1203820 + | protein of unknown function DUF262 Ctha_1013 1203817 - 1203975 + | hypothetical protein TERM 1792 1203991 - 1203980 - g 72 -3 -5.07053 | opp_overlap 1203980, overlap 1203968 AAGCATTTTAAAAAA TGAA AATA TTCA TTGATACATCAGTTT Ctha_1014 1203979 - 1204773 + | hypothetical protein TERM 1793 1204792 - 1204777 - f 84 -4.6 -5.54338 | GAATTAAAATAAAAA CGCTTG GTAA CACGCG GTATAAAAAATTGCC Ctha_1015 1205034 - 1205429 + | hypothetical protein Ctha_1016 1205625 - 1206368 + | hypothetical protein TERM 1794 1206602 - 1206618 + F 82 -9.4 -4.1585 | opp_overlap 1206602 TGAAAACAAAAAAAA CCCCGA CATCC TCGGGG TTTTGGCACTTGTAC TERM 1795 1206618 - 1206602 - f 100 -9.4 -6.34616 | opp_overlap 1206602 TGAAAACAAAAAAAA CCCCGA CATCC TCGGGG TTTTGGCACTTGTAC TERM 1796 1206862 - 1206833 - f 74 -8.7 -3.40163 | gap 1, opp_overlap 1206828 TACTACCAAGATTAA TTTGCGTTGA-TGC GTG GCAATCACCGCAAA TGGAATGGATTCAAA Ctha_1018 1207675 - 1208475 + | Extradiol ring-cleavage dioxygenase class III protein subunit B TERM 1797 1208587 - 1208560 - f 79 -5.8 -4.92783 | AATTTATTATAAAAA TATTTTTGCT TGATTAAG AGCAAAAATA AATAAAATTCAGGAA Ctha_1019 1208612 - 1209211 + | hypothetical protein TERM 1798 1209295 - 1209284 - f 91 -7.2 -5.22039 | opp_overlap 1209292 GCCAAATTCAAAAAA GCCG TAAC CGGC AGCCAAGCCGTTTTG Ctha_1020 1209574 - 1209885 + | hypothetical protein TERM 1799 1210098 - 1210086 - g 85 -6.3 -5.12785 | GAAGCAAAAAATAAA CAACA TGA TGTTG AAGTGACACAATTCA Ctha_1021 1209882 - 1210127 + | hypothetical protein TERM 1800 1210181 - 1210191 + F 75 -6.8 -4.44277 | GCTTTGCGTAACCGG CAGC CAA GCTG TTTTGAATTTTAATG Ctha_1022 1210265 - 1211332 + | integron integrase TERM 1801 1211400 - 1211410 + F 81 -5.4 -5.30155 | opp_overlap 1211400 1211398 AGGTAGTCATGAAGA GCAA CCT TTGC TTTTTTCATTAGTAC TERM 1802 1211593 - 1211578 - g 100 -7.6 -5.60556 | AATACAAAACAAAAA TTGAGG AACG CCTCAA CCAAGTAAGAAATTA Ctha_1023 1211436 - 1212587 + | small GTP-binding protein Ctha_1024 1212594 - 1213319 + | GTP-binding protein HSR1-related TERM 1803 1213541 - 1213524 - f 70 -4.9 -4.63218 | TCTTTGTTAATAAAA TCTTACC TTAG AGTAAGA AATAAAATCAATGTA TERM 1804 1213643 - 1213629 - g 90 -7.2 -5.43866 | CAATCCCTAAAAAAA TAAGAG ATT CTCTTA AGTTGCGCACAGGGG Ctha_1025 1213571 - 1213825 + | transcriptional regulator, AbrB family TERM 1805 1214127 - 1214100 - g 74 -5.6 -4.66609 | opp_overlap 1214099 CATTGCAGCCAAAAA CAGCAAATATGA TTTA TCTGATTTGCTG ATAGTTCATGCTTCT Ctha_1026 1213822 - 1214220 + | PilT protein domain protein TERM 1806 1214253 - 1214277 + T 71 -6.5 -4.08064 | overlap 1214258 1214258 1214259 GGCCGTCCCGGAGAG CTAGCGTCTTT TTG AAAGACCTTAG TTTTCGAAAAGAATT TERM 1807 1214401 - 1214385 - T 100 -9.4 -5.83211 | opp_overlap 1214385 TACCAAAACAAAAAA CCCCGA ACAAA TCGGGG TTTTCTCATCAAACG TERM 1808 1214385 - 1214401 + T 86 -9.4 -4.46212 | opp_overlap 1214385 TACCAAAACAAAAAA CCCCGA ACAAA TCGGGG TTTTCTCATCAAACG Ctha_1027 1214742 - 1214434 - | ferredoxin, 2Fe-2S Ctha_1028 1216108 - 1214837 - | nitrogenase cofactor biosynthesis protein NifB TERM 1809 1214984 - 1214996 + g 80 -6.9 -4.61231 | overlap 1214985 GACTTGCATGCCCTT TGCGC CGA GCGCG TTTTTCGGCGTGTCG Ctha_1029 1217764 - 1216412 - | Nitrogenase TERM 1810 1217295 - 1217307 + g 72 -9.1 -3.55444 | TCGTTCGCAATGCCG CGCTC GGC GAGCG TTTGCACGCTGGCGC TERM 1811 1217390 - 1217405 + g 80 -6.1 -4.77896 | opp_overlap 1217390 1217389 GGCGTGAATCATAAT CGGCA TGGGGC TGCCG TTTTTAAATTCATTG TERM 1812 1217651 - 1217678 + g 80 -6.9 -4.7219 | overlap 1217652 GTAGGTGGCGCAACC TTGCGAGCCGT GCAAAA ACGGCACGCAC TTTTCTATTCCTCTA TERM 1813 1217652 - 1217677 + g 77 -10.4 -3.42229 | overlap 1217651 TAGGTGGCGCAACCT TGCGAGCCGT GCAAAA ACGGCACGCA CTTTTCTATTCCTCT Ctha_1030 1219122 - 1217761 - | nitrogenase MoFe cofactor biosynthesis protein NifE TERM 1814 1217938 - 1217955 + g 77 -7 -4.42748 | TCGTTCTTTCACACC GCCGAT AATCAA ATCGGC TTCTTTTTCCAATAC TERM 1815 1219458 - 1219477 + r 83 -10.6 -3.80573 | ACCGTTTTATCATCA GGGCGACC CTGT GGCCGCCC TTTAATCATCATCAA Ctha_1031 1220896 - 1219514 - | nitrogenase molybdenum-iron protein beta chain Ctha_1032 1222554 - 1220920 - | nitrogenase molybdenum-iron protein alpha chain TERM 1816 1221233 - 1221243 + g 71 -6.8 -4.1891 | opp_overlap 1221218 TGCTCGGCCATATCC GGCA TCA TGCC TTTGTATTCGCCAAG TERM 1817 1222530 - 1222506 - G 73 -7.9 -4.08767 | GGTACTTCTTTAAAA GCTCCTCCT TCACTTC AGAAGGAGC TGGGTATTGCCTTGC Ctha_1033 1222975 - 1222595 - | nitrogen regulatory protein P-II Ctha_1034 1223335 - 1222976 - | nitrogen regulatory protein P-II Ctha_1035 1224186 - 1223362 - | nitrogenase iron protein Ctha_1036 1224363 - 1224626 + | hypothetical protein TERM 1818 1224644 - 1224656 + T 74 -6.3 -4.62069 | GACTGTTGGTGTTTC GAGAA GTC TTCTC TTTTTGAAGTGCACA TERM 1819 1224771 - 1224793 + T 83 -8.4 -4.41348 | ATTGAAACGCTTTCT CAGGATGGCA GCG TGCTTTCCTG TTTCTTTGAAAGCGC Ctha_1037 1226259 - 1224865 - | hypothetical protein Ctha_1038 1226876 - 1226355 - | acetyltransferase, CysE/LacA/LpxA/NodL family Ctha_1039 1227189 - 1227941 + | ABC transporter-related protein Ctha_1040 1229216 - 1228020 - | hypothetical protein TERM 1820 1229179 - 1229194 + g 86 -3.2 -5.75822 | opp_overlap 1229179 AGTGGTCGTGTTAAA TCGCCA AGAA TGACGA TTTTTTTGATTTCTG Ctha_1041 1229305 - 1230222 + | glycosyl transferase family 2 Ctha_1042 1230241 - 1231149 + | glycosyl transferase family 2 TERM 1821 1231224 - 1231193 - T 77 -6.8 -4.61482 | gap 1, opp_overlap 1231219, overlap 1231190 1231196 1231219 TTCTGCAAAAAAGAA TAGGAGCTTTTTC CCAAAAT GAAAAAGC-CCTA AACCAGATGGCTTAG TERM 1822 1231219 - 1231242 + T 90 -11 -4.57569 | opp_overlap 1231196 1231193 1231190 1231219 TCCCAAAATGAAAAA GCCCTAAACC AGAT GGCTTAGGGC TTTTTGCAGAAATGA TERM 1823 1231242 - 1231219 - T 100 -13.2 -5.0925 | opp_overlap 1231219, overlap 1231196 1231193 1231190 TCCCAAAATGAAAAA GCCCTAAACC AGAT GGCTTAGGGC TTTTTGCAGAAATGA Ctha_1043 1232633 - 1231272 - | membrane-associated zinc metalloprotease TERM 1824 1231494 - 1231513 + g 71 -7.8 -3.86194 | gap 1, opp_overlap 1231484, overlap 1231502 AAATAGCAAGAAGCT GC-CCGGGC CTT GCTCGGCGC TTTGTCCGGCAAGTT TERM 1825 1231665 - 1231649 - G 79 -10.9 -3.39595 | overlap 1231642 1231662 TTGAACCAGCCACAA TGGCTTC AAA GAAGCCA AGTTCGGCGTACTCG TERM 1826 1232216 - 1232233 + g 83 -9.1 -4.27584 | opp_overlap 1232200, overlap 1232200 CGGCCTCGACATACG CGCCGGT TGTA ATCGGCG TTTTGGATTCACCAT Ctha_1044 1233833 - 1232670 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1827 1233396 - 1233414 + g 77 -10.2 -3.38812 | overlap 1233395 ATGTTCGCTATCGAC CGGCAGCA TTT TGCAGCCG TGTTCTTCAACGAGC TERM 1828 1233899 - 1233913 + H 71 -4.2 -4.82128 | opp_overlap 1233899 1233898, overlap 1233894 CGGTTTTTTATAAAT CGCCTA ATT TAGACG TTTTATGTTTGGTGG TERM 1829 1234598 - 1234573 - H 91 -7 -5.38054 | gap 1, opp_overlap 1234573 GCCCACAAACAAAAA GCCACATTTCA GAAAT TGA-ATGTGGC TTTTTTAGTTTGAGC TERM 1830 1234573 - 1234598 + H 100 -7.7 -5.37593 | gap 1, opp_overlap 1234573 GCCCACAAACAAAAA GCCACATTTCAG AAA TTGA-ATGTGGC TTTTTTAGTTTGAGC TERM 1831 1234683 - 1234670 - H 78 -5.3 -5.07652 | opp_overlap 1234682, overlap 1234665 1234682 TTTCCCAAAAGAAAA GCTTT CCCA AAAGC TCAACGCGCTTCTCA TERM 1832 1235178 - 1235145 - g 72 -8.1 -3.73107 | gap 1, overlap 1235146 1235149 GTAGGAAATCCCAAA CTGACGCCCGATAGCG TTA CGGTAACGGGCG-CAA AGTGCGTGCTGAAGA TERM 1833 1235175 - 1235149 - g 78 -12.2 -2.6704 | overlap 1235146 1235145 GAAATCCCAAACTGA CGCCCGATAGCG TTA CGGTAACGGGCG CAAAGTGCGTGCTGA TERM 1834 1235404 - 1235427 + G 70 -5.3 -4.41047 | AGCGAGCTTCAATAG CGCTGATTC CCAATC GAATAAGCG TTTTGGTTGGCGGAT Ctha_1045 1234761 - 1235612 + | hypothetical protein Ctha_1046 1236495 - 1235629 - | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Ctha_1047 1236986 - 1236492 - | hypothetical protein TERM 1835 1237136 - 1237115 - R 93 -10.1 -4.89009 | opp_overlap 1237115 AGATCGAATGAAAAA GCCGCTCCA AAAA CGAAGCGGC TTTTTTTCAGAATCT TERM 1836 1237115 - 1237136 + r 91 -7.2 -5.42862 | opp_overlap 1237115 AGATCGAATGAAAAA GCCGCTCC AAAAAC GAAGCGGC TTTTTTTCAGAATCT Ctha_1048 1238484 - 1237171 - | Phosphopyruvate hydratase TERM 1837 1238170 - 1238157 - G 74 -8.1 -3.88641 | opp_overlap 1238148 1238161, overlap 1238148 AAGAAACACCAAGAA TGGCG TTTG CGCCA AGCTTTGATTTGTTC Ctha_1049 1238681 - 1239124 + | hypothetical protein Ctha_1050 1244638 - 1239185 - | AMP-dependent synthetase and ligase TERM 1838 1241433 - 1241413 - G 79 -9.1 -4.07568 | overlap 1241418 CGGGTTTTTCCAAAA TGAAATTGG TGG CCAATTCCA CAGCGCGCGTAACGG TERM 1839 1241638 - 1241650 + g 76 -4.7 -4.77775 | GGTTTATTTCCGGCT GACCG AAA CGGGC TTTCTTTTCTGCAAT TERM 1840 1242820 - 1242808 - G 72 -4.8 -4.62904 | AAACATCGCCAAAAA CCCA AGGCA TGGG ATACGTGCGTGCGTC TERM 1841 1243394 - 1243404 + g 77 -6.8 -4.42386 | AGCATCGAGCGGCTC GCAC ATC GTGC TTTTATAAATCGCCC TERM 1842 1244602 - 1244623 + g 71 -3.6 -4.80882 | overlap 1244603 1244605 CTTCCGAATGCGATT TTAGCGGG AACTGC CCCGCTCG TTTTTGCTCTGCCAT TERM 1843 1244749 - 1244737 - R 70 -6.3 -4.35874 | opp_overlap 1244737 TAAGACAATCCAAAA TGACT CGC AGTCA TTTCATAGCCAAAAG Ctha_1051 1245636 - 1244947 - | transcriptional regulator, Crp/Fnr family TERM 1844 1245191 - 1245165 - G 79 -8.7 -4.19577 | CAAGTCGCAAAATAA CCGAAGCCACT TTGCC AATGGCGTCGG AAAGGGAAATGCTTT TERM 1845 1245789 - 1245777 - H 71 -3.3 -5.02074 | GCATTGCTTAAAAAA GGATG TTG CAGCC AAGATTTGTTAGATA Ctha_1052 1245919 - 1247214 + | trigger factor domain TERM 1846 1247317 - 1247338 + F 100 -11.5 -5.84381 | TTCACAGATTTGCAA GCGTCCGGT AGTT GCCGGGCGC TTTTTTTATTGGTCG TERM 1847 1247656 - 1247668 + G 77 -9.1 -3.89215 | opp_overlap 1247650 GGTCAATTATGATTA CGCCA GCG TGGCG TTTCCATTTATGAGC Ctha_1053 1247378 - 1248397 + | hypothetical protein Ctha_1054 1249549 - 1248491 - | DNA binding domain protein, excisionase family TERM 1848 1250686 - 1250699 + G 73 -2.3 -5.24129 | opp_overlap 1250686 TTCTAACCAATCAAG CGCTT TTCG ATGCG TTTTTTGTGACGAAC Ctha_1055 1249758 - 1251029 + | Ste24 endopeptidase TERM 1849 1251124 - 1251114 - f 71 -6.8 -4.08064 | opp_overlap 1251114 AATCTTTCCTGAAAA TGGC CGC GCCA TTTCGGAAGTCCTTA TERM 1850 1251629 - 1251639 + G 71 -6.8 -4.1552 | TGGCCGAACTAATGG GCGT GCA ACGC TTTGTTCCGGGAATG Ctha_1056 1251187 - 1252257 + | Agmatine deiminase TERM 1851 1252328 - 1252349 + F 100 -10.9 -5.75342 | opp_overlap 1252328 TTTGAAAGGAAAAAA GAGACGCAG CCAT TTGCGTCTC TTTTTTTTAGCCGAA TERM 1852 1252349 - 1252328 - f 100 -10.2 -5.37593 | opp_overlap 1252328 TTTGAAAGGAAAAAA GAGACGCA GCCATT TGCGTCTC TTTTTTTTAGCCGAA TERM 1853 1252477 - 1252428 - f 88 -10.9 -4.29656 | gap 1, opp_overlap 1252429 1252441 GATAAAACCCGAAAA TGTGCGCCGCGCTTTTTA-CCAAA ATC TTTGAATGAAAAACGCAGCGCCCA TTCAGAATTTGGGTT TERM 1854 1252551 - 1252562 + F 70 -3 -5.03145 | TTTTTAATGGTTTTA TGAT TGAG ATCA TTTTTTCACGCCTTG TERM 1855 1253944 - 1253902 - g 77 -7 -4.4017 | opp_overlap 1253902, overlap 1253916 CGAATTTGCAGAAAA TTTGCCGCAAGATACCGTTA TCC TAACGGCAGGATGCGCCAAA TTCCGTTACAATAAA Ctha_1057 1252643 - 1254295 + | hybrid cluster protein TERM 1856 1254367 - 1254335 - f 74 -7.6 -3.95836 | opp_overlap 1254336, overlap 1254330 1254336 ATCTCTAAAATAGAA GCGGGCGGTTAGGA GAATT TCTTAGCCGCCCGT TTTTTTTTGGCAAAT TERM 1857 1254366 - 1254336 - f 79 -11.1 -2.96779 | opp_overlap 1254336, overlap 1254335 1254330 TCTCTAAAATAGAAG CGGGCGGTTAGGA GAATT TCTTAGCCGCCCG TTTTTTTTTGGCAAA TERM 1858 1254336 - 1254366 + F 100 -16.2 -6.06723 | opp_overlap 1254336 1254335 1254330 TCTCTAAAATAGAAG CGGGCGGTTAGGAG AAT TTCTTAGCCGCCCG TTTTTTTTTGGCAAA TERM 1859 1255294 - 1255321 + G 95 -12 -4.05033 | gap 1, opp_overlap 1255289 1255298, overlap 1255295 GCGTACAAAGGGCGA ATCACCGCAGCGG AAG CCGCTGCGG-GAC TTTATATCCCGTACG TERM 1860 1255295 - 1255320 + G 93 -15.5 -3.02698 | gap 1, opp_overlap 1255289 1255298, overlap 1255294 CGTACAAAGGGCGAA TCACCGCAGCGG AAG CCGCTGCGG-GA CTTTATATCCCGTAC TERM 1861 1255318 - 1255298 - g 100 -18.3 -2.74782 | opp_overlap 1255295 1255294, overlap 1255289 ACAAAGGGCGAATCA CCGCAGCGG AAG CCGCTGCGG GACTTTATATCCCGT Ctha_1058 1254577 - 1255467 + | hypothetical protein Ctha_1059 1255491 - 1255976 + | hypothetical protein TERM 1862 1255987 - 1256015 + F 76 -3 -5.4148 | gap 1, overlap 1255989 TCTAAAAATCTTGTA CCGGTGGTGG-GT AAAA GCGCCGCCGCCCG TTTTTTGCTTGTTTC TERM 1863 1256107 - 1256118 + F 84 -5.8 -5.24551 | TTTCCTCGTTTATGG CAGG CACT CCTG TTTTTCTTCATTTCA TERM 1864 1256542 - 1256520 - g 70 -4.9 -4.49939 | AGATAAGCGAGAAAA TGGCAAAAT TTGGG ATATTGCCA CGCCGATGGGCGTTG TERM 1865 1256690 - 1256671 - g 95 -7.8 -5.40072 | CCGGCGGCAAAAAAA TGCACCGC CCGC GCAGCGCA AATCATGCGTGAGGC TERM 1866 1256936 - 1256926 - g 73 -2.4 -5.09426 | opp_overlap 1256926 GCGAATGTCAAAAAA GCGG TGG CCGA CATTATTTTCGGAAA TERM 1867 1257693 - 1257681 - g 73 -4.1 -4.87665 | GCCGAGTTATAAAAA GCTTC CTG AAAGC AGCATCATGGCGGAA Ctha_1060 1256221 - 1257849 + | acetaldehyde dehydrogenase (acetylating) TERM 1868 1257882 - 1257854 - T 100 -9.4 -5.93252 | overlap 1257855 1257856 TTCAAAAATAAAAAA CGCGCCCCGGAG GAAAT CCCCGGGGCGAC CTATCAATAAAACAA TERM 1869 1257881 - 1257855 - T 100 -12.9 -4.13511 | overlap 1257854 1257856 TCAAAAATAAAAAAC GCGCCCCGGAG GAAAT CCCCGGGGCGA CCTATCAATAAAACA TERM 1870 1257880 - 1257856 - T 100 -16.4 -3.05667 | overlap 1257855 1257854 CAAAAATAAAAAACG CGCCCCGGAG GAAAT CCCCGGGGCG ACCTATCAATAAAAC TERM 1871 1257941 - 1257920 - T 71 -9.5 -2.5322 | overlap 1257919 AAAACAACAAAGGAG GTTCTGCCT GAAA AAGCAGAAC TAACAAAGAACAGAC TERM 1872 1258114 - 1258099 - T 71 -4 -5.01546 | gap 1 AAACTCAGAGAAAAA TGC-CAC AGG GTGCGCA AGCTTTTGCTCGCAC Ctha_1061 1258470 - 1258309 - | hypothetical protein Ctha_1062 1259180 - 1258521 - | sugar-phosphate isomerase, RpiB/LacA/LacB family TERM 1873 1259444 - 1259432 - g 71 -3.3 -4.82901 | overlap 1259443 TGCCGCGCAGAAAAA GTTGG AAA CCATC AATCCAAATTTGATT Ctha_1063 1259250 - 1259528 + | Exonuclease VII small subunit TERM 1874 1259908 - 1259937 + T 100 -17.3 -3.65046 | opp_overlap 1259908 AACGTGTATTGAAAA CGTAGAGAGGTAC GGCC GTGCCTCTCTACG TTGTTACGGTAGAAA TERM 1875 1259937 - 1259908 - T 100 -15.1 -4.18762 | opp_overlap 1259908 AACGTGTATTGAAAA CGTAGAGAGGTAC GGCC GTGCCTCTCTACG TTGTTACGGTAGAAA TERM 1876 1260066 - 1260039 - T 91 -10.6 -4.84359 | overlap 1260024 1260023 1260056 CGACTTTTACAAAAA GCGAAGCTCCCC CGAA AGAAAGCTTCGC CTTCAACGCTTTTAC Ctha_1064 1265978 - 1260078 - | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 1877 1260327 - 1260341 + g 80 -5.6 -4.93365 | overlap 1260323 1260321 GGCATGTTTCGGTTC GGCAAC CGC GCTGCC TTTTTCCTTATCCGC TERM 1878 1260958 - 1261000 + g 71 -7 -4.11216 | gap 1, opp_overlap 1260958, overlap 1260959 GAGGAAAGATAAACT TCGCGAATTTGCTCGACCG TCGCTT CGG-CGGGCATATTCACGG TTTTGGAAATGGCGC TERM 1879 1262936 - 1262948 + g 74 -5.5 -4.652 | CACTGACCTGCGCGT TACGG AAG CCGTG TTTTTCGCCTAATTT TERM 1880 1264099 - 1264127 + g 100 -9.5 -5.58179 | opp_overlap 1264073 1264095, overlap 1264074 1264095 1264101 CCGACGGAAACCCGC GCTGTGGTTGCGG TTT CCACAACCGCACC TTTTTTATTATGCTC TERM 1881 1264101 - 1264125 + g 73 -10.7 -2.94342 | opp_overlap 1264095, overlap 1264095 1264099 GACGGAAACCCGCGC TGTGGTTGCGG TTT CCACAACCGCA CCTTTTTTATTATGC TERM 1882 1265190 - 1265219 + g 93 -12.1 -3.72576 | opp_overlap 1265184 ATTGACAATCACCAT TTTGGCGGCGCGG CGAG TCGTGCCGCCGGA TTTGATGGCGCCGGC Ctha_1065 1266730 - 1266215 - | Sporulation domain protein TERM 1883 1266442 - 1266454 + g 84 -10.5 -3.98236 | GCGTGTAGCGAACTT CCGGC GTA GCCGG TTTCTGCTCAGATTT TERM 1884 1267587 - 1267609 + G 72 -2.6 -5.00616 | overlap 1267597 CAGGACATTGCGATT GTGCCGCTAA TGA TTGGCATCAC TTTTTTGAGCCCGCA Ctha_1066 1267089 - 1268870 + | sodium/hydrogen exchanger TERM 1885 1268890 - 1268911 + T 74 -8 -3.91897 | opp_overlap 1268890 GGCCAGCTTCAGAAA TTCGCCGG TCTTTT CTGGCGAA TTTCTGCATCGCGCA Ctha_1067 1269444 - 1269052 - | hemerythrin-like metal-binding protein Ctha_1068 1272832 - 1269629 - | BseRI endonuclease, putative TERM 1886 1270579 - 1270593 + g 83 -2 -5.64304 | overlap 1270576 CATAAAAGCTTTGCT TGCCGG AAG CCGTTA TTTTTTCTTGTGTTA TERM 1887 1272268 - 1272253 - G 85 -6.8 -5.0538 | gap 1, overlap 1272255 TGGCACGGGAAAAAA GGC-CGG AGT CCGCGCC GAAGTCGATCACGAT TERM 1888 1272352 - 1272340 - G 83 -9.1 -4.28548 | AGCGATCGAGGAAAA GCGGA AAC TCCGC GAAGTTCTCTTCAGC TERM 1889 1272618 - 1272630 + g 74 -6.9 -4.19817 | overlap 1272619 CGGTTGTATTGGGTG TCGGC CTT GCCGG TTTTCAATCGGTGGC Ctha_1069 1273369 - 1273773 + | protein of unknown function DUF454 Ctha_1070 1274498 - 1273740 - | phospholipid/glycerol acyltransferase TERM 1890 1273986 - 1273976 - G 79 -8.2 -4.2349 | opp_overlap 1273975 1273976 TCGTGACAGGCAAAA CGGG AAG CCCG GTTCTTGAAGCAAGC Ctha_1071 1275234 - 1274554 - | haloacid dehalogenase, type II TERM 1891 1275294 - 1275272 - H 71 -3.6 -4.89852 | TTACAGCCATAAAAA TAAGAATT TATTTAG AATTCTTA TTGAGCGCGTGTTGA Ctha_1072 1275539 - 1276561 + | HPr kinase Ctha_1073 1276812 - 1277717 + | segregation and condensation protein B Ctha_1074 1277752 - 1278645 + | pseudouridine synthase TERM 1892 1279741 - 1279728 - g 70 -2.5 -5.07567 | GCAGAGGTTAAAAAA TATTT GATG AAATA CGTTGAGCTGGCCAA Ctha_1075 1278645 - 1279811 + | TPR repeat-containing protein TERM 1893 1279850 - 1279878 + F 100 -9.7 -5.80951 | opp_overlap 1279850 TTGATATCATGAAAA GCCTGAATCTT TTGAGTT GAGATTCAGGC TTTTTTATTTTCACT TERM 1894 1279878 - 1279850 - f 83 -9 -4.33274 | opp_overlap 1279850 TTGATATCATGAAAA GCCTGAATCT TTTGAGTTG AGATTCAGGC TTTTTTATTTTCACT TERM 1895 1280854 - 1280885 + G 81 -5 -5.252 | overlap 1280856 GGCGGTGGCGAGAGT CCGAGCCGATTGCT GTCG AGCAGCCGACTCTG TTTTTTCTAACGGTG TERM 1896 1280856 - 1280883 + G 72 -6.2 -4.25873 | overlap 1280854 CGGTGGCGAGAGTCC GAGCCGATTGCT GTCG AGCAGCCGACTC TGTTTTTTCTAACGG Ctha_1076 1279980 - 1281545 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Ctha_1077 1282251 - 1281571 - | putative methyltransferase TERM 1897 1282681 - 1282671 - g 79 -3.2 -5.40072 | GTCGTTTCAAAAAAA GATG CCC CACC AGCAAATCAAAATTT TERM 1898 1282994 - 1283008 + G 82 -2.8 -5.46698 | GGAAGTTCGGGTCGG TCGC ATCAACG GCGA TTTTTTGATTTTCCC TERM 1899 1283130 - 1283116 - g 72 -8.6 -3.74224 | GCGAAATGAGCGAAA TTTCGG AAG CCGAAA TGATCGGCGCGATCA TERM 1900 1283145 - 1283131 - g 72 -8.6 -3.66178 | opp_overlap 1283130 TTTCGGAAGCCGAAA TGATCG GCG CGATCA AGTTTGGGCACGATG TERM 1901 1283354 - 1283372 + G 72 -10.2 -2.77522 | overlap 1283353 AACAGCGGAAGTTTA TGCCGACG CAT CGGCGGCA GTTCTTAGAAAATAT TERM 1902 1284660 - 1284672 + G 72 -6.3 -4.2558 | CGAACCCGCTATTCA CTTTC TAT GAAAG TTTTGGTAGAACCTC Ctha_1078 1282530 - 1284719 + | Polyribonucleotide nucleotidyltransferase Ctha_1079 1284966 - 1286732 + | phosphoenolpyruvate-protein phosphotransferase TERM 1903 1286794 - 1286754 - T 91 -10.2 -4.70879 | gap 1 TCTAAATCTGAAAAA TTTCTCCAATTATTTGCAA GGCA TTA-AAATAATTGGAGAAA TAAAATCCCCGCTGC Ctha_1080 1287298 - 1286777 - | hypothetical protein Ctha_1081 1288605 - 1287295 - | CBS domain containing protein Ctha_1082 1289271 - 1288747 - | single-strand binding protein Ctha_1083 1289652 - 1290038 + | ribosomal protein S12 Ctha_1084 1290064 - 1290531 + | ribosomal protein S7 TERM 1904 1290762 - 1290745 - g 78 -5.5 -4.77438 | opp_overlap 1290744 1290747, overlap 1290748 ATGGAGCAGGAAAAA GAGCGTG GTAT CACGATC ACTTCTGCTGCAACC TERM 1905 1292284 - 1292294 + G 72 -5.4 -4.49556 | TATCCAATGATTGAT GTGA AGG TCAC TTTGTTTGATGGAAA Ctha_1085 1290574 - 1292691 + | translation elongation factor G Ctha_1086 1292738 - 1293919 + | translation elongation factor Tu TERM 1906 1293940 - 1293968 + F 100 -17.5 -5.93809 | overlap 1293933 1293932 TTGGATTGTCGTCCT GAGGGGCGAGTTA TAT TGGCTCGCCCCTC TTTTTTTTGTCCAAA TERM 1907 1294202 - 1294191 - g 73 -2.2 -5.252 | CATGTGGATAAAAAA TCGC GTGA GCAA TTTATGGTGGCTTCG Ctha_1087 1294008 - 1294319 + | ribosomal protein S10 Ctha_1088 1294375 - 1295001 + | ribosomal protein L3 Ctha_1089 1295035 - 1295667 + | ribosomal protein L4/L1e TERM 1908 1295950 - 1295940 - g 75 -3.2 -5.10029 | AGCAATTGGAAAAAA GCCA TTG TGAC TCTGAAAGATGGAGC Ctha_1090 1295700 - 1296017 + | Ribosomal protein L25/L23 TERM 1909 1296325 - 1296337 + G 74 -10.5 -3.18054 | overlap 1296323 GACCCAAATCGTACC GCGCG AAT CGCGC TCTTAAGTTATGCAG TERM 1910 1296378 - 1296364 - g 74 -5.7 -4.61231 | opp_overlap 1296371 1296372 GCAGACGGTGAAAAA CGCTA TATTT TAGCG CCTAACGGCATTAAA Ctha_1091 1296061 - 1296903 + | ribosomal protein L2 Ctha_1092 1296919 - 1297215 + | ribosomal protein S19 Ctha_1093 1297265 - 1297627 + | ribosomal protein L22 Ctha_1094 1297648 - 1298448 + | ribosomal protein S3 Ctha_1095 1298488 - 1298922 + | ribosomal protein L16 TERM 1911 1298976 - 1298955 - g 77 -3.7 -5.243 | gap 1, overlap 1298957 GAAACGATGAAAAAA CACGAAATCG CAT CGCTTTCG-G AAGACGAGTTGAAAA TERM 1912 1298975 - 1298957 - g 76 -7.4 -4.23218 | overlap 1298955 AACGATGAAAAAACA CGAAATCG CAT CGCTTTCG GAAGACGAGTTGAAA Ctha_1096 1298946 - 1299140 + | ribosomal protein L29 Ctha_1097 1299193 - 1299492 + | ribosomal protein S17 Ctha_1098 1299552 - 1299920 + | ribosomal protein L14 Ctha_1099 1300049 - 1300294 + | ribosomal protein L24 Ctha_1100 1300343 - 1300945 + | ribosomal protein L5 Ctha_1101 1300978 - 1301247 + | ribosomal protein S14 TERM 1913 1301573 - 1301560 - g 79 -2.3 -5.5454 | TTAAAGAAATAAAAA GGGTT AGTA AGCCC GGCCGTCGTTCTTAC Ctha_1102 1301325 - 1301720 + | ribosomal protein S8 Ctha_1103 1301744 - 1302283 + | ribosomal protein L6 TERM 1914 1302342 - 1302319 - f 76 -5.4 -4.98255 | TGCTAATTACAAAAA TGAAAGTG GCAAATAT CACTTTCA AAATTTGCTAAACAA Ctha_1104 1302357 - 1302719 + | ribosomal protein L18 TERM 1915 1302752 - 1302736 - f 76 -3.7 -5.18355 | TGTAAAAATTAAAAA TCGTGAA ATG TTAACGA ATCCACGAAAAAAAA Ctha_1105 1302743 - 1303261 + | ribosomal protein S5 Ctha_1106 1303298 - 1303498 + | ribosomal protein L30 TERM 1916 1303727 - 1303737 + G 72 -3.2 -5.0916 | CTTCATCGTCGTCTT CCGA AGT TTGG TTTTTCTGTTCCAAA Ctha_1107 1303547 - 1304107 + | ribosomal protein L15 TERM 1917 1304319 - 1304344 + G 100 -11.1 -5.00138 | ATTTGATCTTTTTGT CGGAGGCGCTT TTAA GAGAGCCTCCG TTTTTGCTTTAGGTA Ctha_1108 1304125 - 1305453 + | preprotein translocase, SecY subunit Ctha_1109 1305496 - 1305714 + | translation initiation factor IF-1 Ctha_1110 1305803 - 1305919 + | ribosomal protein L36 Ctha_1111 1305960 - 1306337 + | ribosomal protein S13 Ctha_1112 1306389 - 1306775 + | ribosomal protein S11 Ctha_1113 1306806 - 1307417 + | ribosomal protein S4 Ctha_1114 1307559 - 1308545 + | DNA-directed RNA polymerase, alpha subunit Ctha_1115 1308592 - 1309101 + | ribosomal protein L17 TERM 1918 1309171 - 1309151 - f 100 -15.5 -3.54307 | opp_overlap 1309151 AAGACTCTTTTTAAA GGCTTGCCA AAC TGGCAAGCC TTTTTATTTTGCATC TERM 1919 1309151 - 1309171 + F 100 -15.5 -5.48213 | opp_overlap 1309151 AAGACTCTTTTTAAA GGCTTGCCA AAC TGGCAAGCC TTTTTATTTTGCATC TERM 1920 1309654 - 1309666 + G 95 -2.6 -6.02919 | CCTCTCATTTCGCTT GCGT TTGTT GCGC TTTTTTTCTTTGTCG Ctha_1116 1309207 - 1310382 + | integral membrane sensor signal transduction histidine kinase TERM 1921 1310385 - 1310372 - f 76 -5.3 -4.87786 | TTAAGCTTAGAAAAA TGCTT AATT AAGCA AGATGGGATATGGGT TERM 1922 1310521 - 1310511 - g 72 -2.6 -4.93296 | TTATTATGAGAAAAA TTTA CTC TAAA ATGAAGTCTTCGGTG TERM 1923 1310551 - 1310586 + G 74 -10.6 -3.12668 | opp_overlap 1310584 GTTGTTTTTCATTTT TACTGTTGCAAGTATA TCTG TATACTCGCAACAGCA TGTTCAACTTTGGCC TERM 1924 1311283 - 1311271 - g 72 -2.7 -5.06103 | opp_overlap 1311279 AGAAGTTTTAAAAAA TTCAA ATG CTGAA ATTCAGTTGCATAAA TERM 1925 1312686 - 1312662 - g 73 -4.5 -4.78029 | opp_overlap 1312634, overlap 1312657 CCAATAAAAGCAAAA TCTTTATTT TGGCGTT AAATAAAGA TAAAAAACAAGGAAT Ctha_1117 1310501 - 1313182 + | KWG Leptospira repeat protein TERM 1926 1313226 - 1313258 + T 89 -10 -4.59081 | gap 1, opp_overlap 1313229 1313234, overlap 1313228 1313229 1313234 AAGCGTCTCGTATAA C-AAGAAAACGCCGT TTTT ACGGCGTTTTCATCG TTTTGTATGAATTTG TERM 1927 1313228 - 1313255 + T 95 -12.8 -3.22496 | opp_overlap 1313229 1313234, overlap 1313226 1313229 1313234 GCGTCTCGTATAACA AGAAAACGCCGT TTTT ACGGCGTTTTCA TCGTTTTGTATGAAT TERM 1928 1313254 - 1313229 - T 100 -16.3 -3.78934 | opp_overlap 1313228 1313226 1313229 1313234, overlap 1313234 CGTCTCGTATAACAA GAAAACGCCGT TTTT ACGGCGTTTTC ATCGTTTTGTATGAA TERM 1929 1313229 - 1313254 + T 100 -16.3 -2.52775 | opp_overlap 1313229 1313234, overlap 1313228 1313226 1313234 CGTCTCGTATAACAA GAAAACGCCGT TTTT ACGGCGTTTTC ATCGTTTTGTATGAA TERM 1930 1313249 - 1313234 - T 93 -10.4 -4.95547 | opp_overlap 1313229 1313228 1313226 1313234, overlap 1313229 CGTATAACAAGAAAA CGCCGT TTTT ACGGCG TTTTCATCGTTTTGT TERM 1931 1313234 - 1313249 + T 89 -10.4 -4.43571 | opp_overlap 1313234 1313229, overlap 1313229 1313228 1313226 CGTATAACAAGAAAA CGCCGT TTTT ACGGCG TTTTCATCGTTTTGT Ctha_1118 1314844 - 1313300 - | GMP synthase, large subunit TERM 1932 1314624 - 1314610 - G 72 -8.6 -3.737 | GAAGGCCGTAGCAAA TTCCCA AAA TGGGAA TGTCCAGCTCGTAAA TERM 1933 1314939 - 1314915 - R 82 -9.3 -4.17089 | overlap 1314938 TTTAAAGTGTCAAAA TGCTTTCAGGC GGA GCCGAAAAGCA CGAAACCGTATTGGT Ctha_1119 1317311 - 1314954 - | penicillin-binding protein, 1A family TERM 1934 1315749 - 1315785 + g 74 -6 -4.57569 | gap 1 TGAGGGTGGCACGGA TTCATTC-ACCAGGCGA ATTG TCACTTGGTTGAGTGAA TTTTTCAGCGCGTCG TERM 1935 1317365 - 1317382 + r 70 -7 -3.85704 | opp_overlap 1317365 TACTTCTAAACAAAA GCTACC CGAGAC GGTAGC TTTCCTCGTTACTGA TERM 1936 1317382 - 1317365 - R 83 -7 -4.87803 | opp_overlap 1317365 TACTTCTAAACAAAA GCTACC CGAGAC GGTAGC TTTCCTCGTTACTGA Ctha_1120 1318390 - 1317485 - | alpha/beta hydrolase fold TERM 1937 1317676 - 1317696 + g 79 -7.5 -4.4767 | GTTCATAGAGTGTGA CCATGCCGT CGG GCGGAATGG TTTTATCATCGATGC TERM 1938 1318031 - 1318013 - G 71 -10.2 -2.66711 | overlap 1318006 1318012 GCCACAAGCGATAAT CGTCACCG AAG CGGTGGCG TTCGGATAGCGATGG TERM 1939 1318660 - 1318673 + r 75 -2.4 -5.46698 | CTCCCAAATTTCGCT CTTC ACTAAA GAAG TTTTTTGCTTTTCAA Ctha_1121 1319468 - 1318665 - | Beta-lactamase TERM 1940 1320576 - 1320556 - g 75 -6.1 -4.44046 | TTTATTCCAAAGAAA GCCTCACGA ACC TCTTGAAGC ACGCCGGCTTTTCCG TERM 1941 1320841 - 1320830 - g 77 -3.6 -5.1101 | CGACCAGCTAAAAAA CGCC TTGC GGCA GATTGATCGCTATAA Ctha_1122 1319814 - 1321784 + | Methyltransferase type 11 TERM 1942 1321810 - 1321843 + F 84 -6.1 -5.28826 | gap 1, overlap 1321801 1321811 ATTTTAGCATGAGGA C-CGCAGGCTTTCA GGAAAAG TGAAGGTCTGCGTG TTTTTTATCGCATTT TERM 1943 1321811 - 1321841 + F 86 -9.8 -4.26475 | overlap 1321801 1321810 TTTTAGCATGAGGAC CGCAGGCTTTCA GGAAAAG TGAAGGTCTGCG TGTTTTTTATCGCAT Ctha_1123 1322039 - 1322389 + | protein of unknown function DUF486 TERM 1944 1322472 - 1322447 - T 100 -14.9 -4.97402 | opp_overlap 1322447 1322454 1322454, overlap 1322454 CAAAAGGTATAAAAA TGAAAAAGGGG CATC CCCCTTTTTCA TTGTAGCTTGTTACA TERM 1945 1322447 - 1322472 + T 100 -14.9 -3.47751 | opp_overlap 1322447 1322454, overlap 1322454 1322454 CAAAAGGTATAAAAA TGAAAAAGGGG CATC CCCCTTTTTCA TTGTAGCTTGTTACA TERM 1946 1322454 - 1322464 + T 73 -8.2 -3.55296 | opp_overlap 1322447 1322454, overlap 1322447 1322454 TATAAAAATGAAAAA GGGG CAT CCCC CTTTTTCATTGTAGC TERM 1947 1322454 - 1322465 + T 83 -7.2 -4.93968 | opp_overlap 1322447 1322454, overlap 1322454 1322447 TATAAAAATGAAAAA GGGG CATC CCCC TTTTTCATTGTAGCT TERM 1948 1322464 - 1322454 - T 100 -8.2 -5.2197 | opp_overlap 1322454 1322454 1322447, overlap 1322447 TATAAAAATGAAAAA GGGG CAT CCCC CTTTTTCATTGTAGC Ctha_1124 1323036 - 1322521 - | hypothetical protein Ctha_1125 1323393 - 1323082 - | hypothetical protein TERM 1949 1323844 - 1323854 + G 72 -8.2 -3.66288 | overlap 1323839 GGGAAGGACTCGCCC GCGC ACG GCGC TTCTCTTGAAAAATA TERM 1950 1323888 - 1323924 + G 71 -9.9 -3.23216 | opp_overlap 1323875 1323874 1323886 ATCGGAATTAAATTC CGCGCAGTTCGAGGCCG TGA CGACCACCGACGGCGCG TTGCTGGTCGTGGCC TERM 1951 1324065 - 1324078 + G 72 -8.1 -3.66921 | TCAGGAAATGCTTGC TCGCG CCGC CGCGA TTTGCGATTCGCGTT TERM 1952 1324175 - 1324163 - g 72 -9.1 -3.53811 | opp_overlap 1324161 TGCACGCCTCGCAAA TCGGC CTT GCCGA AAATTTTACCGTGCT TERM 1953 1324267 - 1324255 - g 79 -2.7 -5.4505 | overlap 1324261 GGGTTTAACAAAAAA GAAAA ACG CTTTC CGAAAAAACGCACAC TERM 1954 1324277 - 1324261 - g 100 -3.7 -5.84011 | overlap 1324255 1324276 AACAAAAAAGAAAAA CGCTTTC CGA AAAAACG CACACTTGCGACCGT TERM 1955 1324287 - 1324276 - g 80 -5.8 -5.00616 | overlap 1324261 CGCTTTCCGAAAAAA CGCA CACT TGCG ACCGTTATCAGCACT TERM 1956 1325279 - 1325269 - g 85 -6.8 -5.00616 | overlap 1325270 1325271 TCGTCCGGCAAAAAA TCGC TCG GCGA AACCGCCGCCGCCGT Ctha_1126 1323784 - 1325886 + | UvrD/REP helicase Ctha_1127 1326009 - 1326125 + | hypothetical protein Ctha_1128 1326122 - 1326259 + | hypothetical protein TERM 1957 1326268 - 1326299 + F 79 -10.1 -3.52459 | TGCCTGAATGGCAAT CCCGAGCGTTGAG CGGAGC CGAAACGCTCGGG TTCTGTGGCCTTCGT Ctha_1129 1326465 - 1327061 + | orotate phosphoribosyltransferase Ctha_1130 1327079 - 1327945 + | Prephenate dehydrogenase TERM 1958 1328465 - 1328477 + G 76 -9.1 -3.77832 | opp_overlap 1328465 TTATCGCGACATCAA CCGGT TCA ACCGG TTATTCGCTTTCCGC Ctha_1131 1327942 - 1328793 + | ATP-NAD/AcoX kinase TERM 1959 1329521 - 1329511 - g 100 -5.4 -5.86061 | GCCTATCAAAAAAAA CACA CAT TGTG GCGTGATATTCGAGT Ctha_1132 1329055 - 1329750 + | hypothetical protein Ctha_1133 1330805 - 1329804 - | quinone oxidoreductase, YhdH/YhfP family Ctha_1134 1332111 - 1331095 - | extracellular solute-binding protein family 1 TERM 1960 1331473 - 1331512 + g 71 -3.5 -4.86033 | overlap 1331476 GCCACGCGAGAGCTT CAAGTAAAGCTGGGTCG GGTCGG CGGCGTAGCTTTTCGTG TTTTTGTCCAACTTT TERM 1961 1331769 - 1331759 - G 80 -6.8 -4.72272 | opp_overlap 1331759 GGTGCGTACCAAAAA TCCG ACG CGGA TTTGAATTCAGCCGC TERM 1962 1332498 - 1332514 + G 71 -3.6 -4.77157 | overlap 1332480 TCGGGCAAGGTCGGG CCGGGC GCGGG GCTTGG TTTTTCGTGGATTAA Ctha_1135 1332207 - 1333277 + | hypothetical protein Ctha_1136 1333290 - 1334114 + | hypothetical protein TERM 1963 1335156 - 1335167 + G 77 -7.2 -4.54727 | overlap 1335149 CGGTTTATGCCGTTG GGCC GAAC GGCC TTTTCATTTCACCCG Ctha_1137 1334111 - 1335691 + | glycosyl hydrolase BNR repeat-containing protein TERM 1964 1336015 - 1335993 - T 75 -7.8 -4.12902 | TAAGCATTTCGAAAA TCATTTGCAT GAA ATGCCAATGA AGCCGCACTACGATA TERM 1965 1336094 - 1336074 - T 79 -8.1 -4.11216 | overlap 1336075 GGTTCAGCCGGAAAA TGCGCGGCG GCT CGCCGCTCC AGTGCCAGCGCCTGC TERM 1966 1336093 - 1336075 - T 83 -11.6 -3.06515 | overlap 1336074 GTTCAGCCGGAAAAT GCGCGGCG GCT CGCCGCTC CAGTGCCAGCGCCTG Ctha_1138 1336603 - 1336199 - | hypothetical protein Ctha_1139 1338470 - 1336785 - | hypothetical protein TERM 1967 1337792 - 1337780 - G 73 -7.7 -4.19258 | opp_overlap 1337779 1337780 ACAGTCGAGCCAAAA GCGTT GCG AACGC CATTTCGTAAGAAAC Ctha_1140 1339310 - 1338483 - | stationary-phase survival protein SurE TERM 1968 1338911 - 1338867 - G 73 -4.2 -4.87133 | gap 1 AGTGGTCAAAGAAAA GGCGATG-GATGGAATCTCGT AGAT ACGCCCTTCCACCGCAGCGCC AATTGTGCCGGAATA TERM 1969 1339257 - 1339275 + g 76 -8.2 -4.15106 | TTTGGTCTGCGAGGC TGGCTCAT ACG ATGAGTCA TTTTCAGAATTGCTC Ctha_1141 1339870 - 1339619 - | hypothetical protein Ctha_1142 1339909 - 1340967 + | metalloendopeptidase, glycoprotease family TERM 1970 1341232 - 1341215 - g 81 -3.3 -5.4148 | GAAACAATTAAAAAA GGCGACC GCGT GGTAACC ATCGGCGGCATTCAC Ctha_1143 1341029 - 1341388 + | preprotein translocase, YajC subunit TERM 1971 1342346 - 1342329 - g 75 -6.3 -4.41206 | gap 1, overlap 1342332 AATTACCGCACAAAA TC-ACGGC TTT GCCGTCGA CCCGAATTCCATGCC Ctha_1144 1341427 - 1342536 + | carbamoyl-phosphate synthase, small subunit TERM 1972 1342588 - 1342565 - T 93 -11.1 -4.87318 | opp_overlap 1342565 GCCAAAATGTAAAAA GCCTAACAG TGTGAG CTGTTAGGC TTTTTCGTTTTTATT TERM 1973 1342565 - 1342588 + T 100 -11.8 -5.24003 | opp_overlap 1342565 GCCAAAATGTAAAAA GCCTAACAGT GTGA GCTGTTAGGC TTTTTCGTTTTTATT Ctha_1145 1344011 - 1342623 - | protein of unknown function DUF900 hydrolase family protein TERM 1974 1343010 - 1343026 + g 71 -7.9 -3.90729 | TTCGCGAAATCGCGC CCGAACC GCA GGGTCGG TTTCTACCAGTTCTT TERM 1975 1344068 - 1344046 - H 79 -7.7 -4.25104 | GGTTTGGGATGAAAA GCCGGTAAG ATTTG CTTACCGTC AGGTTGCTCGAATGC Ctha_1146 1344325 - 1344540 + | hypothetical protein TERM 1976 1344563 - 1344596 + F 90 -6.8 -5.61596 | opp_overlap 1344567, overlap 1344567 AGCTGGTTCAGACTC AAAAGCCATCCG AAATCAACCG CGGATGGCTTTC TTTTTTTCTGCGCGT TERM 1977 1344592 - 1344567 - f 79 -7.6 -4.2349 | opp_overlap 1344563 1344567 GGTTCAGACTCAAAA GCCATCCG AAATCAACCG CGGATGGC TTTCTTTTTTTCTGC TERM 1978 1344567 - 1344592 + F 100 -7.6 -5.27709 | opp_overlap 1344567, overlap 1344563 GGTTCAGACTCAAAA GCCATCCG AAATCAACCG CGGATGGC TTTCTTTTTTTCTGC TERM 1979 1344664 - 1344652 - f 70 -4.8 -4.59773 | TTTCAGCTTCAAAAA GGCT ATGAA AGCC GTTGCATCGAGTTTG TERM 1980 1345287 - 1345267 - g 72 -5.4 -4.51812 | CTTTAGAAGAAGAAA TTTCCGGC AAAAA GCCCGAAA ATTACACGCACGTGC TERM 1981 1345707 - 1345725 + G 70 -5.2 -4.4078 | opp_overlap 1345693 1345707, overlap 1345709 GGCGCCGCAACCAAC GCTGTGCA AAT TGCGCAAC TTTTGGTTGACAAGC Ctha_1147 1344723 - 1345763 + | aspartate-semialdehyde dehydrogenase TERM 1982 1346680 - 1346690 + G 71 -6.8 -4.07885 | GCATACTTCGGCGGC CAGC GTA GCTG TTTTGCCAGAAGCTG Ctha_1148 1346078 - 1347154 + | peptide chain release factor 1 TERM 1983 1347601 - 1347589 - g 79 -2.7 -5.28778 | AGCACGCAGAAAAAA TCAAC ATG ATTGA AATCGAAATAGGTAG TERM 1984 1347834 - 1347822 - g 70 -4.9 -4.41047 | ATCGTTCAAGGAAAA GAATT AAA AATTC GGTCCATTAATATAG Ctha_1149 1347522 - 1347854 + | hydrogenase expression/synthesis HypA TERM 1985 1348062 - 1348017 - gf 72 -9.1 -3.23692 | CATCATCATCACGAA CATGGACATGGTCATCATCAC CATC ATGATCATGAGCACGGCCATG AGCATCACCATCACG TERM 1986 1348198 - 1348225 + GF 70 -7.2 -3.794 | gap 1 GCAATCGTGGTTATT TTGAG-GCAAAAG GAA TTTTTGCGCTCAA TTTGGTCAGTTCGCC TERM 1987 1348452 - 1348466 + GF 72 -8.6 -3.35371 | overlap 1348448 GAAATGGAGTTGGCG CAAGAC AGC GTCTTG TTGATTGAGAATGTC Ctha_1150 1347867 - 1348787 + | hydrogenase accessory protein HypB TERM 1988 1350597 - 1350607 + GT 79 -4.6 -5.20216 | overlap 1350589 1350588 CGCCATTGACCAGCA GTGC GGG GCGC TTTTTTGATGCTGTC TERM 1989 1351029 - 1351057 + GT 72 -9.5 -2.87211 | ACGACGGTGGGATTT CGCTGGGTCAAGC CCT GATTGGCCGAGCG TATCTGAAAGGCGAT Ctha_1151 1348748 - 1351093 + | (NiFe) hydrogenase maturation protein HypF Ctha_1152 1352115 - 1351330 - | type II restriction endonuclease TdeIII Ctha_1153 1353692 - 1352115 - | DNA methylase N-4/N-6 domain protein TERM 1990 1352170 - 1352188 + g 72 -3 -4.93454 | overlap 1352172 CCTTTATCTTTTTCC GTCCGATT TAA AACCGGTC TTTTATATTTATTTA TERM 1991 1353064 - 1353051 - G 70 -2.5 -5.08824 | opp_overlap 1353052 1353056 1353058, overlap 1353052 GGGTGACGGAAAAAA TTTTT TATT AAAAA TATTTAATTCGGTAA TERM 1992 1353234 - 1353260 + g 70 -9.2 -3.4015 | opp_overlap 1353227 GGAAATATCGACCCC GACGGCGTGCAG TCC CAGCTCGCCGGC TTGTACCATTGTTGT Ctha_1154 1354543 - 1353773 - | dimethyladenosine transferase TERM 1993 1354438 - 1354455 + g 76 -4.9 -4.84761 | gap 1, overlap 1354438 TATCATGTTCGGCAA TT-TCCGC CGA GCGGACAA TTTTTCTGGAAATAT TERM 1994 1354487 - 1354500 + g 85 -3.9 -5.52384 | opp_overlap 1354487 TGAGTCAACCAGAAA GTTTT GTCC AAAAC TTTTTTTGCTCGAGA TERM 1995 1354640 - 1354620 - g 83 -8.9 -4.23794 | GTAATGGAACAGAAA CCCGCCACC TTG AGTCGCGGG GAAACAAAGCGACTC TERM 1996 1354712 - 1354699 - g 70 -9.5 -2.96321 | opp_overlap 1354699 1354706 1354707, overlap 1354696 GGTAGGAAAAGACGA GCGCG TGGT CGCGC TTTGTGCGGATTTAA TERM 1997 1354699 - 1354712 + G 80 -9.5 -3.91072 | opp_overlap 1354696 1354699, overlap 1354706 1354707 GGTAGGAAAAGACGA GCGCG TGGT CGCGC TTTGTGCGGATTTAA Ctha_1155 1354592 - 1355575 + | Transketolase central region TERM 1998 1355593 - 1355619 + F 100 -6.6 -5.86332 | opp_overlap 1355593 ACGTTTTTTATAAAA CCCGCTGAAT GGTTAGG ATTCATCGGG TTTTTTTTGACTTAA TERM 1999 1355619 - 1355593 - f 75 -6.6 -4.37092 | opp_overlap 1355593 ACGTTTTTTATAAAA CCCGCTGAAT GGTTAGG ATTCATCGGG TTTTTTTTGACTTAA TERM 2000 1355660 - 1355673 + F 81 -4.5 -5.48213 | CTTTCCTGCTTATAT CCCGA TGTG TTGGG TTTTTATTTTCGCTA TERM 2001 1355945 - 1355957 + G 72 -4.7 -4.56597 | opp_overlap 1355935, overlap 1355946 AGGCATCGTCATCGG ACGCG ACA CGCGC TTTTTGGGCGAGGAA Ctha_1156 1355805 - 1357247 + | Phosphoglucomutase TERM 2002 1357291 - 1357326 + F 81 -10.6 -3.44149 | opp_overlap 1357295, overlap 1357295 AAAGTGTTAAATAAA TAAAGTCGGCTTTGGA CTTG TACAAAGTCGACTTTG TGTTCTCTGTTCTAA TERM 2003 1357295 - 1357322 + F 85 -9.2 -4.33674 | opp_overlap 1357295, overlap 1357291 TGTTAAATAAATAAA GTCGGCTTTGGA CTTG TACAAAGTCGAC TTTGTGTTCTCTGTT TERM 2004 1357322 - 1357295 - f 81 -7 -4.78326 | opp_overlap 1357295 1357291 TGTTAAATAAATAAA GTCGGCTTTGGA CTTG TACAAAGTCGAC TTTGTGTTCTCTGTT Ctha_1157 1357407 - 1357742 + | hypothetical protein Ctha_1158 1357783 - 1358400 + | recombination protein RecR Ctha_1159 1358914 - 1360302 + | Carotene 7,8-desaturase Ctha_1160 1361613 - 1360384 - | peptidase U32 Ctha_1161 1361992 - 1361624 - | ferredoxin-like protein TERM 2005 1361939 - 1361961 + g 100 -7.1 -6.07627 | GTCCGTTTCTGGTCT GAGTTTGTG GCAAA CATAAACTC TTTTTTTTTCAGAAT Ctha_1162 1363702 - 1362140 - | Ppx/GppA phosphatase TERM 2006 1364028 - 1364002 - R 100 -11.6 -4.68424 | opp_overlap 1364003, overlap 1364003 CAATTCAGGTAAAAA CGAGACAAGGCA AAG CGCCTTGTCTCT TGAATGTTTAATCGA TERM 2007 1364003 - 1364027 + r 100 -14.4 -3.25479 | opp_overlap 1364002 1364003 AATTCAGGTAAAAAC GAGACAAGGC AAAGC GCCTTGTCTC TTGAATGTTTAATCG TERM 2008 1364027 - 1364003 - R 100 -15.1 -3.40331 | opp_overlap 1364003, overlap 1364002 AATTCAGGTAAAAAC GAGACAAGGCA AAG CGCCTTGTCTC TTGAATGTTTAATCG Ctha_1163 1365410 - 1364073 - | outer membrane efflux protein TERM 2009 1365488 - 1365456 - R 91 -9.9 -4.84033 | AGATAAAAATGAAAA CAAGCACGAACGC TTCTTTT GCCTTCGCGCTTG CAAGTCTGTTACTCG Ctha_1164 1368649 - 1365497 - | acriflavin resistance protein TERM 2010 1366458 - 1366448 - G 87 -6.8 -5.14563 | TTCTTGACCAAAAAA TCCG CTT CGGA CTTGCGCCATCACCT Ctha_1165 1370033 - 1368849 - | efflux transporter, RND family, MFP subunit Ctha_1166 1370577 - 1370098 - | transcriptional regulator, MarR family TERM 2011 1370513 - 1370493 - G 81 -3.4 -5.36441 | gap 1 CCTTCAGATAAAAAA TCATGACTT TGCG AAG-CATGA TGTGAGCGTTCCCGA TERM 2012 1370613 - 1370603 - H 71 -4 -4.9251 | AATAAAAAATTAAAA TGAT TGT ATCA CTAATATTTGATGAT TERM 2013 1371252 - 1371288 + GH 76 -4.5 -5.03145 | gap 1, opp_overlap 1371282, overlap 1371253 1371254 AGCCGAAGCGTCCAT TTCGGCG-TTGGAAGA CGCGAT TCTTTCAAACGCCGCG TTTTTTGGCGGATTG TERM 2014 1371254 - 1371286 + GH 72 -9.3 -2.75975 | gap 1, opp_overlap 1371282, overlap 1371253 1371252 CCGAAGCGTCCATTT CGGCG-TTGGAAGA CGCGAT TCTTTCAAACGCCG CGTTTTTTGGCGGAT Ctha_1167 1370881 - 1371825 + | hypothetical protein TERM 2015 1371862 - 1371852 - gf 89 -4 -5.72053 | TAAGCAAACAAAAAA GAAA GTT TTTC GCGCGGCTTCACGAT TERM 2016 1372266 - 1372281 + GF 76 -4.6 -5.00616 | overlap 1372267 ATGCTATTTTTGCCA GCCACG ATAG CGTGGA TTTTTTCAACCCAAA TERM 2017 1372267 - 1372280 + GF 73 -8.1 -3.60048 | overlap 1372266 TGCTATTTTTGCCAG CCACG ATAG CGTGG ATTTTTTCAACCCAA Ctha_1168 1371794 - 1372612 + | tRNA/rRNA methyltransferase (SpoU) TERM 2018 1372775 - 1372750 - f 100 -7.6 -5.86976 | opp_overlap 1372750 GTAGAAAATAAAAAA GTGGTGCTGT GGGGGG AAAGCACCAC TTTCTCGCTGCACAA TERM 2019 1372750 - 1372775 + F 74 -7.6 -3.91897 | opp_overlap 1372750 GTAGAAAATAAAAAA GTGGTGCTGT GGGGGG AAAGCACCAC TTTCTCGCTGCACAA TERM 2020 1374933 - 1374919 - g 89 -4.2 -5.72207 | overlap 1374920 1374923 GGCAAAGGAAAAAAA TGATCG CCG CGGTCA GGCAATCGGAACGGG Ctha_1169 1373141 - 1375777 + | TPR repeat-containing protein Ctha_1170 1377331 - 1375787 - | response regulator receiver and SARP domain protein TERM 2021 1376449 - 1376428 - G 71 -7.3 -4.07675 | opp_overlap 1376438 GCAAAAGCAAGTAAA GCAAAAGCC TTCT GGCTTTTCC AGATTTCCAATCGCT Ctha_1171 1377629 - 1378396 + | short-chain dehydrogenase/reductase SDR TERM 2022 1378543 - 1378527 - f 71 -9.5 -2.63631 | TCAATTGGTAGAGCA GCTGATT TGT AATCAGC AGGTTGCGGGTTCGA TERM 2023 1378719 - 1378703 - f 71 -9.5 -2.62616 | opp_overlap 1378694 TCAGTCGGTAGAGCA CTTCCTT GGT AAGGAAG AGGTCACCGGTTCAA Ctha_1172 1378897 - 1379091 + | preprotein translocase, SecE subunit TERM 2024 1379360 - 1379342 - g 86 -3 -5.80364 | opp_overlap 1379344, overlap 1379343 1379344 ACGGGAAGAAAAAAA GTCGCGTT AAA AACGCGTT TCCTGGTTATGTGCT TERM 2025 1379358 - 1379344 - g 70 -10 -3.0287 | opp_overlap 1379344, overlap 1379343 1379342 GGGAAGAAAAAAAGT CGCGTT AAA AACGCG TTTCCTGGTTATGTG TERM 2026 1379344 - 1379358 + G 80 -10 -3.88015 | opp_overlap 1379343 1379342 1379344 GGGAAGAAAAAAAGT CGCGTT AAA AACGCG TTTCCTGGTTATGTG Ctha_1173 1379104 - 1379715 + | NusG antitermination factor Ctha_1174 1379768 - 1380193 + | ribosomal protein L11 TERM 2027 1380196 - 1380207 + F 73 -3 -5.24129 | GATCGAAGGATAACC GATT ATAA AATC TTTTTTGTGGGAGGC TERM 2028 1380244 - 1380260 + F 76 -5.1 -5.03747 | CACCTTTAGTATTTG GTGTGAC TGC GTCAAAC TTTTTTACCACATTT Ctha_1175 1380288 - 1380974 + | ribosomal protein L1 TERM 2029 1381375 - 1381340 - g 76 -9.2 -3.71487 | gap 1, opp_overlap 1381342 1381348 CAGTAGATGGAACAA TATTTG-AAGCAGGTCA GCT CGACCAGCTTTCAAATA TGCTGAGTAAGACTG Ctha_1176 1380994 - 1381515 + | ribosomal protein L10 Ctha_1177 1381597 - 1381980 + | ribosomal protein L7/L12 TERM 2030 1382012 - 1382054 + F 95 -12 -4.02206 | opp_overlap 1382012, overlap 1382019 TGAGATTGCCAAAAT GGGCAAGGTTCCGCTATATC TAA GGCTTAGCGGAGCTTTGTCC TTTGGTGTTTCGATT TERM 2031 1383901 - 1383911 + G 71 -6.8 -4.12225 | overlap 1383902 1383902 GAAACGCCTGAAGGC CCGA ACA TCGG TTTGATTTCGTCGTT TERM 2032 1384939 - 1384927 - g 74 -3.4 -5.06816 | opp_overlap 1384927 ACGCCGGAAGAAAAA TTGC TTCGT GCAA TTTTCGGTGAAAAGT Ctha_1178 1382269 - 1386156 + | DNA-directed RNA polymerase, beta subunit TERM 2033 1386436 - 1386418 - g 76 -4.6 -5.02074 | TGATGTGCGAAAAAA TCTTTGGT CCG ACGAAAGA CTGGGAATGTTATTG TERM 2034 1388264 - 1388244 - g 72 -8.9 -3.57462 | overlap 1388245 CATGTGATTTCCAAA GTCGGCACG GTT CGCGCCGAA AAATTCCTTGATGAC TERM 2035 1388263 - 1388245 - g 78 -12.4 -2.74263 | overlap 1388244 ATGTGATTTCCAAAG TCGGCACG GTT CGCGCCGA AAAATTCCTTGATGA TERM 2036 1388574 - 1388611 + G 77 -9.2 -3.91084 | gap 2, overlap 1388575 TCCGGTGCGAGAGGC TCGCGCA-ACCAGGC-GC GTCA GCTGACTGGTATGCGCGG TTTGATTGCGCGTCC TERM 2037 1388575 - 1388610 + G 73 -10.5 -2.94329 | gap 2, overlap 1388574 CCGGTGCGAGAGGCT CGCGCA-ACCAGGC-GC GTCA GCTGACTGGTATGCGCG GTTTGATTGCGCGTC Ctha_1179 1386246 - 1390745 + | DNA-directed RNA polymerase, beta' subunit TERM 2038 1390773 - 1390802 + T 100 -16.7 -3.86935 | opp_overlap 1390779, overlap 1390779 GTGAAATATCGAATT GAAAAAGGCACTT TTTA AAGTGCCTTTTTC TTGTTCTCGTAGTTC TERM 2039 1390796 - 1390779 - T 91 -9.9 -4.75174 | opp_overlap 1390773 1390779 TATCGAATTGAAAAA GGCACTT TTTA AAGTGCC TTTTTCTTGTTCTCG TERM 2040 1390779 - 1390796 + T 100 -9.9 -5.34365 | opp_overlap 1390779, overlap 1390773 TATCGAATTGAAAAA GGCACTT TTTA AAGTGCC TTTTTCTTGTTCTCG Ctha_1180 1391174 - 1390833 - | hypothetical protein Ctha_1181 1393144 - 1391156 - | Peptidase M1 membrane alanine aminopeptidase TERM 2041 1391407 - 1391419 + g 85 -6.3 -5.24129 | GATATTTTTTCACTT TATCG ATG CGATA TTTTTTGTCGGCAAC TERM 2042 1393609 - 1393590 - H 93 -10.8 -5.0133 | opp_overlap 1393590 CAGCGCTTGAAAAAA GTCTTCCT ATTC AGGAAGAC TTTTTTTTTGACTAA TERM 2043 1393590 - 1393609 + H 100 -10.8 -6.11644 | opp_overlap 1393590 CAGCGCTTGAAAAAA GTCTTCCT ATTC AGGAAGAC TTTTTTTTTGACTAA Ctha_1182 1393774 - 1394892 + | hydroxyneurosporene synthase TERM 2044 1395487 - 1395499 + G 74 -10.5 -3.17763 | TTCCGGCAAGTTTTG CGGCG CTT CGCCG TTGGTACGATATAGA Ctha_1183 1394937 - 1395608 + | uncharacterized protein-like protein Ctha_1184 1397225 - 1395627 - | Spermine synthase TERM 2045 1397141 - 1397155 + g 83 -2.1 -5.79635 | TTGCAAAAATGCTGA GCTTT AAGAC AAGGC TTTTATTTTTTTTTT Ctha_1185 1398097 - 1397249 - | protein of unknown function DUF350 TERM 2046 1397888 - 1397876 - G 70 -9.1 -3.34013 | CAGGTCTTCAACCAA GCCGT TCG ACGGC CCGAAAATCACGCCG Ctha_1186 1398982 - 1398239 - | hypothetical protein TERM 2047 1398287 - 1398303 + g 70 -5 -4.39318 | GAACGTGCTTTGCGT GCCACG GCTAA CGCGGC TTTTAAATTTGCTTA Ctha_1187 1399567 - 1399013 - | hypothetical protein Ctha_1188 1399749 - 1400171 + | ferredoxin thioredoxin reductase beta chain TERM 2048 1400204 - 1400181 - T 75 -6.7 -4.42765 | opp_overlap 1400181, overlap 1400176 TCCTAAAAAACGAAA GGCTGCCTA AAACAA CAAGCAGCC TTTTCTATTCTTCAG Ctha_1189 1400538 - 1400209 - | CutA1 divalent ion tolerance protein Ctha_1190 1400821 - 1400573 - | redox-active disulfide protein 2 TERM 2049 1400723 - 1400737 + g 71 -3.4 -4.82901 | CGTGATACTTTCAAC GGTGGC CTC GACGCC TTTTTCTAAGACGAC Ctha_1191 1401258 - 1400815 - | protein tyrosine phosphatase Ctha_1192 1402493 - 1401423 - | permease TERM 2050 1402092 - 1402074 - G 78 -6.6 -4.63479 | overlap 1402085 GATCAGAAAGGAAAA CGTGACAC CAA GCGGCACG CCCGCTTGCAAAAAT TERM 2051 1402130 - 1402118 - G 76 -4.7 -4.90296 | overlap 1402108 1402119 AAAATCCGATAAAAA GCGGC ACC GCCGA GCAAGAACAAAACGG TERM 2052 1402326 - 1402312 - G 100 -8.6 -5.76633 | TCATAGACAAAAAAA TGGAGA GAC TCTCCA AAATGCGTGTCGCGG Ctha_1193 1402744 - 1402511 - | redox-active disulfide protein 2 Ctha_1194 1403172 - 1402828 - | transcriptional regulator, ArsR family Ctha_1195 1403873 - 1403214 - | hypothetical protein Ctha_1196 1404966 - 1404013 - | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 2053 1405065 - 1405079 + H 70 -8.6 -3.17194 | opp_overlap 1405049 CTAAACACCCTATGA CGGTTT AGC AAACCG TTGCCTTCAGCCACT TERM 2054 1405630 - 1405644 + H 100 -11.4 -5.5353 | AATCTCCACCTTTCT CCCGCA AAA TGCGGG TTTTTTCTTAATGTG Ctha_1197 1405710 - 1407197 + | inosine-5'-monophosphate dehydrogenase TERM 2055 1407173 - 1407191 + T 70 -8.9 -3.12505 | opp_overlap 1407171, overlap 1407171 AATCACGAAAGAATC GCCAAAC TACTC GTTTGGC TATTAAATGTACGGT TERM 2056 1407277 - 1407300 + T 100 -12.4 -5.61881 | opp_overlap 1407277 AAAATTAATAAAAAA GGCTGCCCTG ATGT CACGGCAGCC TTTTTCTTTTTCAAC TERM 2057 1407300 - 1407277 - T 100 -12.4 -5.61689 | opp_overlap 1407277 AAAATTAATAAAAAA GGCTGCCCTG ATGT CACGGCAGCC TTTTTCTTTTTCAAC TERM 2058 1407331 - 1407345 + T 72 -2.1 -5.26875 | AGTTGCTTATTCGCC GCGTT AGGAA AATGC TTTTTTCATTCGCGA Ctha_1198 1408548 - 1407334 - | aminotransferase class I and II TERM 2059 1407677 - 1407690 + g 74 -5.9 -4.56597 | TGATCGCCTGTGAGT GCGGC AATC GCTGC TTTTTGAGAAACAGA TERM 2060 1408406 - 1408437 + g 78 -6.6 -4.59251 | gap 1, opp_overlap 1408413 AAATCCGGTTCGCCA GCCGAAAGGC-TGAT AAC ATCATGCCCTTCAGC TTTCATTTTTTTTGC Ctha_1199 1409136 - 1408630 - | pantetheine-phosphate adenylyltransferase TERM 2061 1408981 - 1409004 + g 100 -3.8 -6.00814 | TTGGATCATTTCCAT CCGTTCTTCG GCTG TGAAAAGCGG TTTTTTTTGGTTATT Ctha_1200 1409700 - 1409149 - | methyltransferase TERM 2062 1409410 - 1409396 - G 74 -5.6 -4.67942 | TGCAAGAAACGAAAA GCGTCG GTG CGAAGC AGGTTGGTTTGGTGT TERM 2063 1409548 - 1409535 - G 79 -8.1 -4.24002 | CTTCAAATCCTAAAA TGCCG CTTC CGGCA AAAAGATCTAACACG TERM 2064 1409607 - 1409657 + g 73 -7.7 -4.03234 | gap 2, opp_overlap 1409607 1409609, overlap 1409608 CCAGGAGGTCAAAAA TAGTTT-GTCGCACAC-GTCCGGTT GTT GGCCTGACAGTGTGCGACGAAACGG TTTGTATGACGCGGC TERM 2065 1409655 - 1409609 - G 87 -11.1 -3.93148 | gap 2, opp_overlap 1409608 1409607, overlap 1409607 AGGAGGTCAAAAATA GTTT-GTCGCACAC-GTCCGG TTGTTGG CCTGACAGTGTGCGACGAAAC GGTTTGTATGACGCG Ctha_1201 1410640 - 1409723 - | Transketolase domain protein TERM 2066 1409770 - 1409790 + g 74 -11.1 -2.75963 | overlap 1409769 1409782 CAGCGAGCGCTTTTT CGCCGTCAG CAG CTGACGGGG CTTTGCCGTGCCAGT TERM 2067 1410402 - 1410418 + g 71 -3.7 -4.8667 | AACATAAAATCCTGA TTTGCTG CGG TGGCAAA TTTTTCTGGGCTGTG Ctha_1202 1411270 - 1410695 - | protein of unknown function DUF205 Ctha_1203 1411938 - 1411270 - | SNARE associated Golgi protein TERM 2068 1411797 - 1411772 - G 100 -16.3 -3.50393 | GCCGACGCGATAGAA GCGACAAACGA GAGC TCGTTTGTCGC TATCAAATAGCCCAC Ctha_1204 1412669 - 1411962 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 2069 1412406 - 1412420 + g 76 -4.3 -5.00884 | CATCACAACTTCCGC CTTGA TAATT TCAAG TTTTTTGCAAAGCAT TERM 2070 1412620 - 1412636 + g 72 -8.1 -3.78597 | TCGGGATTGTCGGTT GCAAAAA TTT TTTTTGC TTTACCTTCATAAAT Ctha_1205 1413055 - 1414188 + | Serine--glyoxylate transaminase TERM 2071 1414272 - 1414255 - T 93 -10.5 -4.95843 | opp_overlap 1414255 ATAGAAAACAGAAAA GGGGCGA AAAA CCGCCCC TTTATTATTTTGATA TERM 2072 1414255 - 1414272 + T 91 -9.8 -4.70107 | opp_overlap 1414255 ATAGAAAACAGAAAA GGGGCG AAAAAC CGCCCC TTTATTATTTTGATA Ctha_1206 1414836 - 1414321 - | NUDIX hydrolase Ctha_1207 1416430 - 1414934 - | Carbamoyl-phosphate synthase L chain ATP-binding TERM 2073 1415000 - 1415012 + g 70 -4.7 -4.42238 | GTTTTTTTGCGTTTC CTGCG CCG CGCCG TTTTGCTTGGCCTGG TERM 2074 1415037 - 1415058 + g 76 -5.1 -4.85782 | gap 1, opp_overlap 1415034, overlap 1415040 GCCTGGAAAATAGCT GCAGCAATGG CCG CCACTGC-GC TTTGTTTTTCCCCGA TERM 2075 1415233 - 1415246 + g 71 -3.8 -4.82901 | opp_overlap 1415233 GTCGCATTTTCAGAA TCGC ACTTTC GCGA TTTTTGTCCCAAACA TERM 2076 1416191 - 1416179 - G 72 -4.8 -4.55697 | ATTCTCAGAAAGAAA TCCG TAGCC CGGA TGAATGGCGTCGCAA Ctha_1208 1417876 - 1416620 - | coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein Ctha_1209 1421277 - 1418032 - | acriflavin resistance protein TERM 2077 1418862 - 1418884 + g 93 -9.2 -4.7416 | overlap 1418858 1418879 ACTCGATAAGCTTGC CATCGCGATT TTT GATCGTGATG TTTTTCACATTTTGG TERM 2078 1419811 - 1419799 - G 70 -9.1 -3.40141 | GAAAAGGCTAAGCAA GGTGG AAA CCACC ATCACAATCGCAAAC Ctha_1210 1422351 - 1421287 - | efflux transporter, RND family, MFP subunit TERM 2079 1421835 - 1421849 + g 89 -9.2 -4.71222 | opp_overlap 1421835 CGCGCGCAGAAATCA CGCCGG TTA CCGGTG TTTTGATTTTGGTAT Ctha_1211 1423077 - 1422412 - | transcriptional regulator, TetR family TERM 2080 1422976 - 1422990 + g 74 -5.7 -4.56597 | opp_overlap 1422989 GATCATGTCCATCGA GGCTT GCTGA AAGCC TTTTTCAAAGAAAAC TERM 2081 1423155 - 1423143 - R 70 -7.7 -3.67175 | opp_overlap 1423142 1423143 ATGGCGCAAAAGTAA CGGAA TGT TTCCG ATTTTACAATCCACC Ctha_1212 1426247 - 1423365 - | hypothetical protein TERM 2082 1424413 - 1424399 - G 73 -7.8 -4.09739 | opp_overlap 1424412 GCAATCCTTCCAAAA TGCCCG TGC CGAGCA CGCCATAGAGGCGCG TERM 2083 1425762 - 1425792 + g 71 -3.8 -4.89852 | opp_overlap 1425771, overlap 1425763 1425766 CAACCCAAATTTTGT GGAATCGAACGCCG ATT CGGCGTGCAACTCG TTTTTCTGCATATCG TERM 2084 1425783 - 1425771 - G 74 -10.5 -3.17075 | opp_overlap 1425766 1425763 1425762 TTTTGTGGAATCGAA CGCCG ATT CGGCG TGCAACTCGTTTTTC Ctha_1213 1428307 - 1426268 - | Heparinase II/III family protein TERM 2085 1426566 - 1426584 + g 85 -3.8 -5.626 | CCATAAACGCGATCT TCAACCGT TAG GCGATTGA TTTTTTTCTCGAATA TERM 2086 1427147 - 1427135 - G 81 -4.7 -5.14563 | opp_overlap 1427140, overlap 1427136 1427137 GCGTTTATCAAAAAA TGCCG CAG CGGCG CTTAGCACAGCGGTG TERM 2087 1427146 - 1427136 - G 72 -8.2 -3.68256 | opp_overlap 1427140, overlap 1427135 1427137 CGTTTATCAAAAAAT GCCG CAG CGGC GCTTAGCACAGCGGT TERM 2088 1427231 - 1427200 - G 79 -2.8 -5.40004 | overlap 1427201 GATTAAACCAAAAAA GCCGGCCATCGTCG CTAT CGCCAATGAGCGGG GCTGAGCCATCGGGG TERM 2089 1427615 - 1427641 + g 80 -7.3 -4.59773 | opp_overlap 1427618, overlap 1427618 CAAAAAGCCCATCCA AAAGTTGGCGA CCGTT TCGCCAGCTTC TTTTTCAAAATCGGC TERM 2090 1427638 - 1427618 - G 74 -6.8 -4.20106 | opp_overlap 1427615 1427618 AAAGCCCATCCAAAA GTTGGCGA CCGTT TCGCCAGC TTCTTTTTCAAAATC TERM 2091 1427618 - 1427638 + g 86 -9 -4.41633 | opp_overlap 1427618, overlap 1427615 AAAGCCCATCCAAAA GTTGGCGA CCGTT TCGCCAGC TTCTTTTTCAAAATC TERM 2092 1428169 - 1428152 - G 71 -3.5 -4.8543 | GAATTCGGACAAAAA TTCCTTT GCTG AAAGAAA CGGCAGGTCTTTGGA Ctha_1214 1428491 - 1429732 + | tryptophan synthase, beta subunit Ctha_1215 1430011 - 1430397 + | hypothetical protein TERM 2093 1430724 - 1430735 + G 72 -5.8 -4.46615 | overlap 1430723 TTCCGTTCCTATATG CAGC GGCG GCTG TTTTCATTGCTGATG Ctha_1216 1430384 - 1430866 + | hypothetical protein TERM 2094 1430859 - 1430871 + T 70 -4.9 -4.63007 | CCTTTTTACTTTATA GATTT TAG AAATC TTTTATCTCATTGTA Ctha_1217 1431556 - 1431005 - | Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein Ctha_1218 1432041 - 1431553 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 2095 1431869 - 1431857 - G 70 -10.5 -2.56596 | overlap 1431853 GGCGTGATGAATGCA GCGCG CAG CGCGC CAGCCTTGCGGTGGC TERM 2096 1432060 - 1432075 + r 89 -10.4 -4.54026 | opp_overlap 1432070, overlap 1432058 TGATTTGCTGAATGT TCCCGC AAAA GCGGGA TTCTTTTCTTTGAAA TERM 2097 1432116 - 1432097 - R 100 -4.9 -6.06723 | overlap 1432070 TCTTTGAAAAAAAAA TGCCTGC TCGTGT GCCGGCA TGGCGAATTTAAAAT Ctha_1219 1432853 - 1432131 - | Integral membrane protein TerC TERM 2098 1432728 - 1432700 - G 79 -8.8 -4.13304 | opp_overlap 1432704 1432725 AAATGACGGCCAAAA GCAAGCCTGTGC GGCGA GCATTGGCTTGC TGCGAGACCGGCAAT TERM 2099 1433025 - 1432986 - R 86 -9.3 -4.41047 | AGCGTGTAATGAAAA GCGTCTTGGCGCGAA TGGAAAAATT TTCGCGCCAAGTTGC AAGGCCAGTTAGTCA Ctha_1220 1433909 - 1433034 - | hypothetical protein TERM 2100 1434584 - 1434594 + G 88 -8.2 -4.86731 | ATTTCGCGGACGCGG GCGC TTG GCGC TTTTCTTTGGAGAAG Ctha_1221 1434171 - 1435778 + | hypothetical protein TERM 2101 1435819 - 1435841 + F 76 -9.1 -3.72078 | opp_overlap 1435819 1435832, overlap 1435839 ATAAAGATTTAGATA GGCAGCGTC AAAAC GGCGTTGCC TTAATTATTTTATGG Ctha_1223 1436288 - 1436701 + | hypothetical protein TERM 2102 1436875 - 1436863 - g 72 -2.6 -5.01497 | overlap 1436857 ATGATCACAGAAAAA CAGC TTTTC GCCG ATTTGATACAGAAAC TERM 2103 1437161 - 1437143 - g 79 -7.4 -4.4648 | overlap 1437145 AGTCTTACTACAAAA GTGAGCAA TAT TTGCTCGC CGTCGATACATTCAA TERM 2104 1437501 - 1437485 - g 81 -8.7 -4.46212 | overlap 1437495 TTGCTGAGGAGAAAA TTCGCGA AAG CCGCGAA AAGCTCGCAAGAAAA Ctha_1224 1436848 - 1437807 + | putative lipoprotein TERM 2105 1437879 - 1437892 + G 74 -3.8 -5.00616 | opp_overlap 1437891, overlap 1437878 TTTTGCGCTTTGCAC GCTC ACCAGA GAGC TTTTTTCGCCGGAAA Ctha_1225 1437811 - 1438410 + | nicotinate (nicotinamide) nucleotide adenylyltransferase Ctha_1226 1439415 - 1438432 - | hypothetical protein TERM 2106 1438524 - 1438542 + g 79 -3 -5.36441 | opp_overlap 1438516 GCAGGAACGCGATGC CTTCCGGC TGC GCGTGAAG TTTTTTGTCTAACGG Ctha_1227 1439417 - 1439971 + | hypothetical protein Ctha_1228 1441156 - 1440035 - | thiamine-monophosphate kinase TERM 2107 1440677 - 1440691 + g 88 -3.4 -5.75538 | overlap 1440679 GCCAGGTTTTGCCGT GCTGCG CCG CGCGAC TTTTTCTTTTTTCAC Ctha_1229 1441356 - 1442297 + | signal recognition particle-docking protein FtsY Ctha_1230 1442365 - 1443069 + | deoxyribose-phosphate aldolase TERM 2108 1443876 - 1443856 - g 78 -6.1 -4.59773 | overlap 1443859 1443864 CGCGAGCTTCAAAAA GAACTGAAG GCG CTTCAGCGC GAAACGGGACGCAAT TERM 2109 1443873 - 1443859 - g 81 -8.6 -4.41633 | overlap 1443856 1443864 GAGCTTCAAAAAGAA CTGAAG GCG CTTCAG CGCGAAACGGGACGC Ctha_1231 1443337 - 1444356 + | ABC transporter-related protein Ctha_1232 1444392 - 1444733 + | hypothetical protein TERM 2110 1444769 - 1444789 + F 100 -4 -6.11644 | CAACTAAAAGTTTAA GCAGAC ATTAAAACC GTCTGC TTTTTTTTTAAATAG Ctha_1233 1445080 - 1445304 + | hypothetical protein TERM 2111 1445385 - 1445405 + F 100 -4 -6.20267 | CAACTAAAAGTTTAA GCAGAC ATTAAAACC GTCTGC TTTTTTTGTTTTTGG Ctha_1234 1445566 - 1446372 + | prolipoprotein diacylglyceryl transferase TERM 2112 1446768 - 1446749 - g 84 -8.6 -4.63486 | ACCGGCGCAATAAAA CTCGGTGT CAAA ACACCAAG CTACGATGGGGAAAC TERM 2113 1446893 - 1446875 - g 73 -4.5 -4.7871 | overlap 1446865 1446863 1446876 1446877 AAGCAGCAGCAAAAA CCGCCGA TGTTT TCGGCAA CTTGGCACAAGGGGA Ctha_1235 1446494 - 1447219 + | tRNA pseudouridine synthase B TERM 2114 1448055 - 1448037 - g 71 -9.6 -3.21099 | opp_overlap 1448027 1448026 TCGCTCGATGATGAA CATCGGTT TTA AACCGACG GTGACAAATGAGCAT Ctha_1236 1447276 - 1448256 + | riboflavin biosynthesis protein RibF Ctha_1237 1448306 - 1448575 + | ribosomal protein S15 TERM 2115 1448578 - 1448590 + F 85 -6.9 -5.08824 | overlap 1448587 CATTCGTAAGTAAGT CGGCG CAG CGTCG TTTTTTCAGTCAAAA TERM 2116 1448587 - 1448611 + F 83 -8 -4.56597 | opp_overlap 1448608 1448609 1448610, overlap 1448578 GTAAGTCGGCGCAGC GTCGTTTTTT CAGTC AAAAAACGGC TTTTTGCGAAAAAAA TERM 2117 1448663 - 1448686 + F 100 -12.6 -4.72486 | overlap 1448654 GTTGAATGCCTCGAA GGCGATTTTA AAAG TAAAATCGCC TTTTTGCACTTTGTC TERM 2118 1449163 - 1449143 - g 72 -4.7 -4.60487 | GACGACGTGCAAAAA CTCGCTTTT GAA AAATACGAG GAAGCTTTGGCGAAA Ctha_1238 1448738 - 1449388 + | thymidylate synthase, flavin-dependent TERM 2119 1449987 - 1450008 + G 71 -7.3 -4.07568 | gap 1, opp_overlap 1449980 GAAATTGATCGCCTG CGGC-TTCGT GCC ACGAGCGCCG TTTTGAGCGGACGAA TERM 2120 1450135 - 1450125 - g 80 -6.8 -4.66163 | opp_overlap 1450124, overlap 1450126 ACGGGCATGGAAAAA TCGC GGC GCGA GCTTTTAAACGAGTT TERM 2121 1450456 - 1450419 - g 70 -4.7 -4.44608 | opp_overlap 1450422, overlap 1450420 GCGATTGAAAAAGAA CTGGCCTCGCGGCTCAA TGTG TTGCGCAGCGAGGATAA ATTGGTGGAGGCGCA Ctha_1239 1449606 - 1451660 + | excinuclease ABC, B subunit Ctha_1240 1451924 - 1452838 + | Peptidase M23 Ctha_1241 1452904 - 1453131 + | hypothetical protein TERM 2122 1453148 - 1453110 - f 71 -8.3 -3.41051 | gap 1, opp_overlap 1453116, overlap 1453111 1453113 GGATTTCTATTATAA CGAC-GAGGACACAGAAT TTTA ATTCTGTGTCCTTTGCCA AGTTCCCTCGCATGT TERM 2123 1453147 - 1453111 - f 71 -9.6 -2.64416 | gap 1, opp_overlap 1453116, overlap 1453110 1453113 GATTTCTATTATAAC GAC-GAGGACACAGAAT TTTA ATTCTGTGTCCTTTGCC AAGTTCCCTCGCATG TERM 2124 1453116 - 1453141 + F 100 -14.9 -3.5774 | opp_overlap 1453113 1453111 1453110 CTATTATAACGACGA GGACACAGAAT TTTA ATTCTGTGTCC TTTGCCAAGTTCCCT TERM 2125 1453290 - 1453307 + G 75 -6.3 -4.40003 | gap 1, overlap 1453282 AGAGTTTTGGCCTTT TGGCTGCT TTT AGC-GCCA TTTGTATTTATCACA TERM 2126 1453776 - 1453753 - g 70 -5.2 -4.4267 | opp_overlap 1453753 CGCTAAAAGTTAAAA TTAGCGAAGG TCTT CCAACGCTAA TTGATAGCATTCGCT Ctha_1242 1453245 - 1455593 + | surface antigen (D15) Ctha_1243 1455919 - 1456203 + | hypothetical protein TERM 2127 1456303 - 1456292 - T 74 -5.8 -4.57073 | opp_overlap 1456291 TACGTCCCTCAAAAA TGCG TGGT CGCA AGTTCTGCGGCGCCG Ctha_1244 1457587 - 1456352 - | hypothetical protein TERM 2128 1456525 - 1456490 - G 76 -4.1 -4.92239 | opp_overlap 1456483 1456484 GCAAAAAGCGAAAAA CGCCTTTTCGTTT AGAAGCCATA AAACGTAAAAGCG TTTTTCCTTTTCATA TERM 2129 1457245 - 1457229 - G 71 -7.3 -4.12296 | overlap 1457226 GGCACAATTAAATAA TTCCCTG AAT CAGAGAA CGAAATTTCTATTTT Ctha_1245 1458005 - 1457592 - | hypothetical protein TERM 2130 1458928 - 1458909 - g 71 -7.2 -4.09739 | GCAATTCGGTGAAAA TGACGATT TGAA AATCGCCA CCAACCAAATTGAAA Ctha_1246 1458373 - 1459770 + | lysine 2,3-aminomutase related protein TERM 2131 1459810 - 1459833 + T 79 -6.8 -4.70319 | CATATTTTTTTGTCG GCCACTTT GGTTTCAA AAAGTGGC TTTTGCTTTTGATGG Ctha_1247 1460234 - 1459863 - | small multidrug resistance protein TERM 2132 1460376 - 1460360 - R 100 -11.5 -5.64274 | opp_overlap 1460357 1460360 TTAGCCATAAAAAAA GCCGGCA AGG CGCCGGC TCAATTTAACATTTC TERM 2133 1460360 - 1460376 + r 78 -10.8 -2.6704 | opp_overlap 1460360, overlap 1460357 TTAGCCATAAAAAAA GCCGGC AAGGC GCCGGC TCAATTTAACATTTC Ctha_1248 1461474 - 1460407 - | hypothetical protein Ctha_1249 1462888 - 1461464 - | hypothetical protein TERM 2134 1461687 - 1461670 - G 87 -10.5 -4.1466 | overlap 1461636 1461680 1461682 1461683 AGCCAACGTCCAAAA GCGCGCC AAAT AGCGCGC CGCCAAGCGCTGAAG TERM 2135 1461892 - 1461912 + g 72 -10.3 -2.79492 | opp_overlap 1461892, overlap 1461891 GCCCAACTTGATAAA CGCGTGTGC CAA GCTCGCGCG ATTTGAACTTCGGAA TERM 2136 1461912 - 1461892 - G 74 -8.1 -3.92522 | opp_overlap 1461892 1461891 GCCCAACTTGATAAA CGCGTGTGC CAA GCTCGCGCG ATTTGAACTTCGGAA Ctha_1250 1463484 - 1462903 - | hypothetical protein TERM 2137 1463890 - 1463866 - R 100 -11.5 -5.47218 | opp_overlap 1463849 1463869, overlap 1463869 GCTTAGTTAAAAAAA TAAGGGGTTCT GGG AGAACCCCTTG TGCGAACAAGCCCTA TERM 2138 1463869 - 1463887 + r 100 -13.2 -3.28712 | opp_overlap 1463866 1463869, overlap 1463849 TAGTTAAAAAAATAA GGGGTTCT GGG AGAACCCC TTGTGCGAACAAGCC TERM 2139 1463887 - 1463869 - R 100 -13.2 -4.8236 | opp_overlap 1463849 1463869, overlap 1463866 TAGTTAAAAAAATAA GGGGTTCT GGG AGAACCCC TTGTGCGAACAAGCC Ctha_1251 1464823 - 1464128 - | cytochrome c assembly protein TERM 2140 1464406 - 1464416 + g 71 -6.8 -4.09739 | opp_overlap 1464406 TATACACGGAAGAAA GCGA CGC TCGC TTTTCCGGCACTTCA TERM 2141 1464416 - 1464406 - G 74 -6.8 -4.24285 | opp_overlap 1464406 TATACACGGAAGAAA GCGA CGC TCGC TTTTCCGGCACTTCA TERM 2142 1464680 - 1464668 - G 85 -3.3 -5.53991 | overlap 1464669 CATGGACGAAAAAAA TGCGA GGG TCGCC GCAATCGACATGGGA Ctha_1252 1465953 - 1464847 - | Na+/Ca+ antiporter, CaCA family Ctha_1253 1466263 - 1467042 + | fatty acid hydroxylase Ctha_1254 1467270 - 1468004 + | hypothetical protein Ctha_1255 1468049 - 1468915 + | protein of unknown function DUF1350 TERM 2143 1469132 - 1469110 - g 75 -2.6 -5.13016 | overlap 1469112 1469114 AATTAAAACTAAAAA TCCATCTGGC CAA GCAAGACGCA AAAGATGAGCTTGAG Ctha_1256 1469034 - 1469297 + | hypothetical protein TERM 2144 1469325 - 1469350 + F 100 -14.1 -6.07627 | CTTTTCTCATGGTTT TGCTCTCATGC TACG GCATGGGAGCA TTTTTTTTTGCAGGT TERM 2145 1469932 - 1469942 + G 71 -6.8 -4.1711 | opp_overlap 1469930 ATGGAAAAACCATTA CGCT AAA AGCG TTTCTTGAAGCTCAT Ctha_1257 1469502 - 1470026 + | hypothetical protein Ctha_1258 1470307 - 1471098 + | ferredoxin TERM 2146 1471492 - 1471480 - g 72 -2.7 -5.00616 | opp_overlap 1471487 CTCGCCCTGAAAAAA CAAAG ATG CTTTA TGAAGAAGCGTTTGG Ctha_1259 1471191 - 1471916 + | ferredoxin Ctha_1260 1471952 - 1472653 + | succinate dehydrogenase and fumarate reductase iron-sulfur protein Ctha_1261 1472784 - 1474007 + | alanine dehydrogenase/PNT domain protein Ctha_1262 1475526 - 1474012 - | FAD dependent oxidoreductase TERM 2147 1475367 - 1475354 - G 75 -6.7 -4.43624 | AAACCATAGAATAAA GATGC CCCT GCATC GAAAGTGTAGCCACG TERM 2148 1475405 - 1475395 - G 72 -3.2 -5.00884 | ACGTTTTTTAAAAAA GGAA GAA CTCC CGCCAGGTAAGTAGT TERM 2149 1475606 - 1475629 + H 76 -2.6 -5.42259 | gap 1 CATCGAATCAGAGTA TTGT-AAGTGT AAT ATACTTAACAA TTTTTTTCCAACTCA Ctha_1263 1475694 - 1476494 + | RNA polymerase, sigma-24 subunit, ECF subfamily Ctha_1264 1476551 - 1477528 + | hypothetical protein Ctha_1265 1477815 - 1478183 + | transcriptional regulator, ArsR family Ctha_1266 1479236 - 1478250 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2150 1479017 - 1479029 + g 74 -3.3 -4.99134 | AATAAACCAGGGTTT CTCGC CGT GTGGG TTTTTCATTTGCGGT TERM 2151 1479291 - 1479301 + H 81 -6.8 -4.86731 | ACATTACGCATCTGA CACG AAA CGTG TTTTATTTGACAAGC Ctha_1267 1479532 - 1479960 + | heat shock protein Hsp20 TERM 2152 1479990 - 1480005 + F 100 -7.5 -5.51046 | opp_overlap 1479989 1479990 AGGTAAGCAGAAAAG CCCGG CTAAGT CCGGG TTTTTTCTCTCTTTA TERM 2153 1480145 - 1480181 + F 79 -5.2 -5.29445 | TCTCCTTTTTCAATA GTGCTTTCGCAG TTTCAGCTCATTT CTGCGGAGGCAC TTTTTATTATTGCCA Ctha_1268 1480282 - 1482195 + | chaperone protein DnaK TERM 2154 1482253 - 1482230 - f 100 -9.6 -5.68039 | opp_overlap 1482230 AAATCCATAAAAAAA GGGCTACTAA TTCA TAAGTAGCCC TTTTTCATTTAGTTC TERM 2155 1482230 - 1482253 + F 91 -9.6 -5.04222 | opp_overlap 1482230 AAATCCATAAAAAAA GGGCTACTAA TTCA TAAGTAGCCC TTTTTCATTTAGTTC Ctha_1269 1482340 - 1482720 + | photosystem P840 reaction center protein PscD TERM 2156 1482696 - 1482708 + T 74 -6.3 -4.652 | CAACGGTCGCCTGTA CTCAT TGA ATGAG TTTTTCAAGTGATTT TERM 2157 1482750 - 1482771 + T 100 -5.1 -6.09888 | CAGTTAAAATAAAAA GGCAGCTTG ATAT CAGGTTGTC TTTTTTTTGTTCGAG Ctha_1270 1483718 - 1482816 - | dTDP-4-dehydrorhamnose reductase Ctha_1271 1484902 - 1483751 - | geranylgeranyl reductase TERM 2158 1484631 - 1484615 - G 82 -7.9 -4.56597 | GCGTTCGCGCAAAAA GCGATCG AAT CGCTCGC GACGCACCATCCCGA TERM 2159 1485012 - 1485024 + H 81 -10.5 -3.4252 | CCGATTTTATCGAGT GCCCG CGC CGGGC TTCTACTGCATAGCA Ctha_1272 1485135 - 1485602 + | hydrogenase maturation protease Ctha_1273 1486555 - 1485620 - | cobalamin biosynthesis protein CobD TERM 2160 1486092 - 1486075 - G 84 -4.7 -5.4505 | opp_overlap 1486075 1486076, overlap 1486076 GCGCGTAATAAAAAA GCGGCGC AATC ACGCCGT CGCTTAAATTTTCCG TERM 2161 1486091 - 1486076 - G 74 -8.2 -3.86307 | opp_overlap 1486076 1486075, overlap 1486075 CGCGTAATAAAAAAG CGGCGC AATC ACGCCG TCGCTTAAATTTTCC TERM 2162 1486415 - 1486404 - G 74 -7.2 -4.37092 | ATTCCTTTGAGAAAA CGGC CTGC GCCG GCGTTCAAACGCTTT TERM 2163 1486481 - 1486465 - G 76 -5.1 -4.79949 | TGCCGAAAAAAACAA TTGGATG GGG CAACCAA GTCGGGTCGGCCAAA Ctha_1274 1487574 - 1486534 - | aminotransferase class I and II TERM 2164 1486661 - 1486616 - G 71 -6.8 -4.13767 | GTGGCGAGGCGAAAA TGCCC-CGCGCGGCAACCGCGA AAGT TCGAGGC-GTCGCGCACGAGCA GGCCGTGCGTCTCGG TERM 2165 1486694 - 1486709 + g 78 -5.4 -4.87291 | gap 1, opp_overlap 1486694 AAATGTTTTTTCAAA TCGG-CG GCG CGTCCGA TTTTTAGTTCACATA TERM 2166 1487230 - 1487215 - G 71 -6.8 -4.07568 | overlap 1487195 1487216 GGTTTCGTTTGAAAA CGCCTC GTGC GAGGCA AATTGCAAGTCGTGC TERM 2167 1487654 - 1487643 - R 85 -5.8 -5.44119 | TTTATGCGAAAAAAA CACG CTTT CGTG TCGGTCTGAGCGAAG TERM 2168 1488025 - 1488015 - R 83 -5.4 -5.41143 | CAGGGGTGAAAAAAA CAAG CGA CTTG CAATTTCGGCAAACA Ctha_1275 1488473 - 1488057 - | Cupin 2 conserved barrel domain protein Ctha_1276 1490048 - 1488546 - | cobyric acid synthase CobQ Ctha_1277 1490684 - 1490109 - | hypothetical protein TERM 2169 1490408 - 1490434 + g 70 -5.2 -4.38154 | overlap 1490412 ATACAATTCTGATTT TGAACGGCGAAT GGC ATTTTCCGTTTA TTTTCTCCAGAATAT TERM 2170 1490412 - 1490430 + g 71 -3.8 -4.77173 | overlap 1490408 AATTCTGATTTTGAA CGGCGAAT GGC ATTTTCCG TTTATTTTCTCCAGA Ctha_1278 1491887 - 1490685 - | SMC domain protein TERM 2171 1491842 - 1491858 + g 70 -2.3 -5.08824 | overlap 1491845 CGCGAATCTCCGTAT CTTTAAA GAC TTTATAG TTTTTTACGTGAAGC Ctha_1279 1493396 - 1492065 - | sun protein TERM 2172 1492232 - 1492242 + g 73 -4 -4.79352 | TCAGAAATTTTTCAA TCAA CAC TTGA TTTTCTTCTGGCTCA TERM 2173 1493975 - 1494002 + H 100 -8.5 -6.09196 | opp_overlap 1493963 1493975 AATGAATAGATACAA CCTCTTCCG GCATCTTCTA CGGAAGAGG TTTTTTTATTTTCAC TERM 2174 1494002 - 1493975 - H 73 -8.5 -3.70636 | opp_overlap 1493975, overlap 1493963 AATGAATAGATACAA CCTCTTCCG GCATCTTCTA CGGAAGAGG TTTTTTTATTTTCAC Ctha_1280 1494114 - 1495436 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Ctha_1281 1495433 - 1496569 + | homoserine O-acetyltransferase Ctha_1282 1497767 - 1496649 - | putative phytase precursor TERM 2175 1496846 - 1496833 - G 74 -3.8 -5.09225 | ATTTCACCCAAAAAA GCAC CGAGAT GTGC GAAGGTTTTCCGGTC TERM 2176 1497209 - 1497221 + g 84 -7.7 -4.74132 | overlap 1497212 GTTCGCCCAGTTCGT TTGCC GGC GGCAA TTTTTCGTCGGGTGT TERM 2177 1497854 - 1497828 - R 100 -18.2 -4.74598 | opp_overlap 1497835 GAAACGGAAAATAAA GAAGCCATCTCA TAT TGAGATGGCTTC AAAAACAAATGGATC Ctha_1283 1500658 - 1497878 - | TonB-dependent receptor TERM 2178 1499482 - 1499464 - G 77 -8.8 -3.97368 | GGTTGAAGCTATAAA CGCCTTGA TTT TCAGGGCG CGACTTCATGTTTTT TERM 2179 1500213 - 1500195 - G 87 -9.6 -4.25104 | TTCGGGTCAGGAAAA CGGCTAAT TTG ATCAGCCG CAACGATGTTTTTAA TERM 2180 1501043 - 1501024 - R 75 -6.4 -4.41137 | GACAATCATAAGAAA CATCGCCC AACA AAGCGATG CAAAAATCATTTCAT Ctha_1284 1501786 - 1501085 - | magnesium protoporphyrin O-methyltransferase TERM 2181 1501137 - 1501127 - G 72 -5.4 -4.38712 | opp_overlap 1501127 1501120 CGCAGCGTGATAAAA TCCA TGA TGGA TTTTGGCTTGTTGAT Ctha_1285 1505823 - 1501903 - | magnesium chelatase, H subunit TERM 2182 1502676 - 1502698 + g 79 -2.7 -5.40072 | gap 1 AGGCTTTGGCCTGTT CTTTG-GCGT GTTT GCGCACGAAG TTTTTTTCAAGCGGC TERM 2183 1502976 - 1502986 + g 73 -2.4 -5.16681 | CCATCGCAATGGTTT CGGG CAG CGCG TTTTGTTCTTTTTGA TERM 2184 1505663 - 1505651 - G 80 -5.5 -5.09259 | GAGCCGAAAATAAAA TCGGC GTG ACCGA CATCCTCAGCCAGCT Ctha_1286 1506477 - 1506001 - | hypothetical protein TERM 2185 1506855 - 1506836 - R 100 -13.6 -5.33848 | opp_overlap 1506836 AGCAGAATCAAAAAA GCCACCTC TACG GAGGTGGC TTTTAATAGCAGAAA TERM 2186 1506836 - 1506855 + r 100 -13.6 -4.25104 | opp_overlap 1506836 AGCAGAATCAAAAAA GCCACCTC TACG GAGGTGGC TTTTAATAGCAGAAA Ctha_1287 1510694 - 1506885 - | magnesium chelatase, H subunit TERM 2187 1509710 - 1509698 - G 74 -6.9 -4.2558 | opp_overlap 1509699 TATCTTGGATGAAAA GCGGC TGT GCCAC AATGTACGGCACGTC TERM 2188 1510010 - 1510021 + g 73 -4.4 -4.78839 | overlap 1509989 GAGAAGAATTTTTCG GATC GTTT GATC TTTTCTTCTGCCATT TERM 2189 1510595 - 1510614 + g 73 -11.4 -2.72263 | overlap 1510594 CGGACCATTCCGTCA GTTCGGCG GCGT CGCCGAGC ATTTGACGGACATCT Ctha_1288 1511718 - 1510969 - | protein of unknown function DUF169 TERM 2190 1511101 - 1511153 + g 72 -6.2 -4.36914 | gap 2, overlap 1511104 1511107 TTCATCGTCGTTCAG CGG-CAAGCCGGCATTTCCGC-CGAC ATC GCCGAGCGTAAAAGTCGGCTCGTTCG TTTTATAAACAAAAC TERM 2191 1511104 - 1511149 + g 76 -8.9 -3.75115 | gap 1, overlap 1511101 1511107 ATCGTCGTTCAGCGG CAAGCCGGCATTTCCGC-CGAC ATC GCCGAGCGTAAAAGTCGGCTCG TTCGTTTTATAAACA TERM 2192 1511486 - 1511474 - G 70 -10.5 -2.52464 | GTGCTGCCGAAGCCA GCGCC CAT GGCGC CACCGCCGCAAAGCT Ctha_1289 1514233 - 1511738 - | TonB-dependent receptor plug TERM 2193 1513448 - 1513434 - G 84 -8.6 -4.62069 | opp_overlap 1513433 GGCTTATCGTAAAAA CCGTTT TGA AAACGG GCTTTGAAGGTAAAT TERM 2194 1514276 - 1514248 - R 70 -8.8 -3.10843 | opp_overlap 1514249 1514251, overlap 1514247 1514251 TAAAATTGCCAAAAT TCAGAGGGCGGA AACCG TCCGCCCCCTAT TTAATCATCATGCGA TERM 2195 1514249 - 1514275 + r 72 -7.9 -3.80573 | opp_overlap 1514248 1514247 1514251, overlap 1514251 AAAATTGCCAAAATT CAGAGGGCGGA AACCG TCCGCCCCCTA TTTAATCATCATGCG TERM 2196 1514273 - 1514251 - R 90 -12.7 -2.75349 | opp_overlap 1514249 1514251, overlap 1514248 1514247 AATTGCCAAAATTCA GAGGGCGGA AACCG TCCGCCCCC TATTTAATCATCATG TERM 2197 1514251 - 1514273 + r 81 -10.5 -3.48738 | opp_overlap 1514251 1514248 1514247, overlap 1514249 AATTGCCAAAATTCA GAGGGCGGA AACCG TCCGCCCCC TATTTAATCATCATG Ctha_1290 1515335 - 1514292 - | hypothetical protein Ctha_1291 1516006 - 1515524 - | hypothetical protein TERM 2198 1515859 - 1515847 - G 89 -9.1 -4.61873 | opp_overlap 1515846 1515845 1515847, overlap 1515828 TTCTAGAAAGTAAAA GCCGA GTT TCGGC GGTTTTGTCTTTTGA Ctha_1292 1517911 - 1516328 - | Radical SAM domain protein TERM 2199 1516942 - 1516965 + g 83 -8.9 -4.33153 | gap 1, opp_overlap 1516942 1516941 GCGCCATCACACAAC CCGATTCGGC CAAAT GCCGAA-CGG TTTCTTCATCTTCAA Ctha_1293 1518861 - 1518016 - | exodeoxyribonuclease III Xth TERM 2200 1518732 - 1518708 - G 75 -2.8 -5.09762 | opp_overlap 1518712 1518714, overlap 1518709 CTTGAAGAAATAAAA TGTCTGGCTT GTTGG AAGCAAGCCA ATCCACCAAGCTATC Ctha_1294 1519197 - 1521212 + | WD-40 repeat protein TERM 2201 1521308 - 1521286 - f 91 -9.2 -4.91084 | opp_overlap 1521287, overlap 1521287 AATAAAATTGAAAAA GCGCTTCTTT AAA AAAGAAGCGT TTTTCGTTTTGGTGA TERM 2202 1521287 - 1521307 + F 100 -12.7 -5.1166 | opp_overlap 1521287 1521286 ATAAAATTGAAAAAG CGCTTCTTT AAA AAAGAAGCG TTTTTCGTTTTGGTG TERM 2203 1521307 - 1521287 - f 95 -12.7 -3.5221 | opp_overlap 1521287, overlap 1521286 ATAAAATTGAAAAAG CGCTTCTTT AAA AAAGAAGCG TTTTTCGTTTTGGTG Ctha_1295 1521443 - 1522018 + | hypothetical protein TERM 2204 1522367 - 1522345 - g 84 -4.8 -5.40004 | overlap 1522337 TACGAAACGAAAAAA CTTCGCGAAG TGC CTTCTCCAAG CGAGCCCATTGTTTT TERM 2205 1522763 - 1522795 + G 78 -6.2 -4.62069 | opp_overlap 1522757, overlap 1522789 GCAAAATGATTCACT CCTGCGAAAGCTTG ATTTC CTATCTCTCGCAGG TTTTTAAACTGGAGG Ctha_1296 1522234 - 1522941 + | fumarylacetoacetate (FAA) hydrolase Ctha_1297 1522954 - 1523415 + | hypothetical protein TERM 2206 1523452 - 1523425 - T 78 -5.6 -5.05782 | gap 1, opp_overlap 1523425, overlap 1523445 ATGTAGCGGAAAAAA GCGCAG-TCCTTT TTG AAAGACGCTGCGC TTTGAGCAGTGGGCT Ctha_1298 1523916 - 1523467 - | hypothetical protein TERM 2207 1524072 - 1524099 + H 73 -4.2 -4.87786 | overlap 1524082 AATTCGCACGCTTTT CCACATTTTTTG ATTT CAAAAAATCAGG TTTTTATGCGCTTAA TERM 2208 1524567 - 1524578 + G 76 -2.2 -5.37593 | gap 1, overlap 1524567 TGTTAGGATTTTTTT CC-GC AGC GCTGG TTTTTTGGTTTGAAA TERM 2209 1525044 - 1525058 + G 89 -11.4 -4.18164 | GCGCCAACGCCAAGC TGGCCG AAG CGGCCA TTATTTTAGCAGATT TERM 2210 1525351 - 1525338 - g 82 -5.9 -5.09426 | opp_overlap 1525344, overlap 1525317 1525318 CGCAATTTCAAAAAA CAGCG ATTC CGCCG GAGTTTAAAGGACGC Ctha_1299 1524413 - 1525624 + | Ion transport 2 domain protein TERM 2211 1525981 - 1525955 - g 82 -5.6 -5.14563 | overlap 1525959 TTTTTGAGGAAAAAA GCGAGCGATCGG CCA CCGTCGGCGCGC TGACGCACTGCAAAG Ctha_1300 1525657 - 1526160 + | cyclic nucleotide-binding protein Ctha_1301 1526190 - 1527518 + | dihydroorotase, multifunctional complex type Ctha_1302 1527551 - 1527985 + | ferric uptake regulator, Fur family TERM 2212 1528047 - 1528011 - T 100 -11.8 -4.91473 | opp_overlap 1528011 GAATGCAAAAAGAAA CCGAATTAACCAGCTT TTTTG AAGCCAATTAATTCGG TTTAAAAATTAAAAT Ctha_1303 1529359 - 1528076 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 2213 1529049 - 1529029 - G 72 -8.9 -3.53224 | TATCGTGTGCGGAAA TGCCAGTCG AAA CGCCCGGCA AGCAAGAGTCGACCG TERM 2214 1529743 - 1529728 - g 73 -4.6 -4.86033 | overlap 1529730 AAATTTTTAGAAAAA TAGGCG CGCT CGCCGA TGAAATGCAGCTTCC TERM 2215 1529741 - 1529730 - g 71 -7.2 -4.04397 | overlap 1529728 ATTTTTAGAAAAATA GGCG CGCT CGCC GATGAAATGCAGCTT TERM 2216 1530210 - 1530220 + G 76 -8.2 -4.18197 | overlap 1530209 CCGCTTCGCATGATG CGCG CCG CGCG TTTTGCCTCGCAACT TERM 2217 1530350 - 1530340 - g 74 -6.8 -4.23486 | overlap 1530341 AATTATTTAAAATAA TGGC CTC GCCA AAGCCATCGGTCGGA TERM 2218 1530895 - 1530853 - g 74 -3.5 -5.08011 | opp_overlap 1530854 1530863, overlap 1530854 1530856 1530886 AAAAGGTCGAAAAAA TCATGAGCAACTTTCTTTT GGTTG AAGAGAAAGTTTCTCAGGT TTGCGAAAAGGATTT TERM 2219 1530854 - 1530894 + G 72 -9.2 -3.53343 | opp_overlap 1530854 1530853 1530856 1530886, overlap 1530863 AAAGGTCGAAAAAAT CATGAGCAACTTTCTTTT GGTTG AAGAGAAAGTTTCTCAGG TTTGCGAAAAGGATT Ctha_1304 1529670 - 1531103 + | polynucleotide adenylyltransferase/metal dependent phosphohydrolase Ctha_1305 1531201 - 1532103 + | hypothetical protein TERM 2220 1532114 - 1532156 + F 75 -7.8 -4.10159 | gap 1, opp_overlap 1532114 TATAAGTTTTGAACA GTCCTTCTGGCGTAAAGTC GCGCCA GGCTTT-CACCTGAAGGAC TTTCATTTCACTGTT TERM 2221 1532336 - 1532349 + G 74 -5.9 -4.60924 | TGGGACGGCTGTCGC CGCCG CAAT TGGCG TTTTTGCGAGGTTTA Ctha_1306 1532239 - 1532664 + | protein of unknown function DUF6 transmembrane Ctha_1307 1533108 - 1532674 - | hypothetical protein TERM 2222 1532955 - 1532977 + g 70 -10.6 -2.57013 | overlap 1532952 CAGTGAAATATTCCG TGATGATGCG CAC CGCATCGTCG TAAGTTGGGTTCGGA TERM 2223 1533449 - 1533483 + G 84 -7.8 -4.87786 | GATATGAAAACTGCG CCAATCGCGTCCGGCA AAA TGCCTGACATAATTGG TTTTTGTGAGGTTGA TERM 2224 1533784 - 1533766 - g 78 -5.2 -5.00616 | overlap 1533782 TTCCGGCGGAAAAAA GCGTTCTG AGC CGAAACGC GCAAAAGCCGCTGCA Ctha_1308 1533197 - 1534231 + | Endonuclease/exonuclease/phosphatase TERM 2225 1534278 - 1534233 - f 72 -7 -3.91911 | opp_overlap 1534235 1534236 1534249, overlap 1534234 TTTATGTGAAGTAAA TCCTTGATAGGATAGACTGC GTTCGT GCAGTTTATCCTATCAAATT TGGATGGATTAATTT TERM 2226 1534277 - 1534234 - f 77 -10.5 -2.94825 | opp_overlap 1534235 1534236 1534249, overlap 1534233 TTATGTGAAGTAAAT CCTTGATAGGATAGACTGC GTTCGT GCAGTTTATCCTATCAAAT TTGGATGGATTAATT TERM 2227 1534235 - 1534276 + F 100 -14.7 -3.68886 | opp_overlap 1534234 1534233, overlap 1534236 1534249 TATGTGAAGTAAATC CTTGATAGGATAGACTGCG TTCG TGCAGTTTATCCTATCAAA TTTGGATGGATTAAT TERM 2228 1534236 - 1534275 + F 100 -18.2 -2.8085 | opp_overlap 1534234 1534233, overlap 1534235 1534249 ATGTGAAGTAAATCC TTGATAGGATAGACTGCG TTCG TGCAGTTTATCCTATCAA ATTTGGATGGATTAA TERM 2229 1534293 - 1534306 + F 81 -6.7 -4.92239 | opp_overlap 1534292, overlap 1534302 TTGGATGGATTAATT TTCGC AGCG GCGAA TTTTTCGCTTTTTAA TERM 2230 1534302 - 1534314 + F 84 -7.7 -4.70659 | opp_overlap 1534292, overlap 1534293 TTAATTTTCGCAGCG GCGAA TTT TTCGC TTTTTAACTCTGAAG TERM 2231 1534649 - 1534635 - g 73 -4.2 -4.77438 | opp_overlap 1534637, overlap 1534637 ACGTATTATGAAAAA GATGCG AAA CGCATT TATTACCTTTCAATG TERM 2232 1534637 - 1534647 + G 74 -6.8 -4.29326 | opp_overlap 1534637 1534635 GTATTATGAAAAAGA TGCG AAA CGCA TTTATTACCTTTCAA TERM 2233 1534863 - 1534827 - g 79 -4.4 -5.12068 | gap 1, opp_overlap 1534849 1534850, overlap 1534829 1534850 GATATCGAAGAAAAA GAGCCAAACGCAGCGTT AGGG AACGGCGGGCTTGGC-C GGCTTGCCGCTTGCT TERM 2234 1534862 - 1534829 - g 76 -8.1 -4.17914 | opp_overlap 1534849 1534850, overlap 1534827 1534850 TATCGAAGAAAAAGA GCCAAACGCAGCGTT AGGG AACGGCGGGCTTGGC CGGCTTGCCGCTTGC Ctha_1309 1534392 - 1536998 + | glycogen/starch/alpha-glucan phosphorylase TERM 2235 1537148 - 1537168 + G 73 -7.5 -4.19371 | overlap 1537149 ATTTTACGGAAAGCG CCGCGGCAT TTG ATGTCGCGC TTTATTCGGAGTTTG TERM 2236 1537149 - 1537167 + G 75 -11 -3.109 | overlap 1537148 TTTTACGGAAAGCGC CGCGGCAT TTG ATGTCGCG CTTTATTCGGAGTTT Ctha_1310 1536991 - 1537293 + | Stress responsive alpha-beta barrel domain protein TERM 2237 1537426 - 1537392 - T 74 -7.8 -3.95555 | opp_overlap 1537395 1537398, overlap 1537384 1537395 1537398 ACAACTATCTACAAA GCAGAAGGGGGGACTT TGA AAGTTCCCCCTCCTTT CCCACCTCAAAGAGA TERM 2238 1537423 - 1537395 - T 95 -13.9 -3.03012 | opp_overlap 1537395 1537398, overlap 1537384 1537392 1537398 ACTATCTACAAAGCA GAAGGGGGGACTT TGA AAGTTCCCCCTCC TTTCCCACCTCAAAG TERM 2239 1537395 - 1537423 + T 100 -13.9 -3.55444 | opp_overlap 1537384 1537392 1537395 1537398, overlap 1537398 ACTATCTACAAAGCA GAAGGGGGGACTT TGA AAGTTCCCCCTCC TTTCCCACCTCAAAG TERM 2240 1537398 - 1537420 + T 95 -14.2 -2.91144 | opp_overlap 1537398 1537395 1537392, overlap 1537395 ATCTACAAAGCAGAA GGGGGGACTT TGA AAGTTCCCCC TCCTTTCCCACCTCA TERM 2241 1537420 - 1537398 - T 90 -12 -3.65317 | opp_overlap 1537395 1537398, overlap 1537395 1537392 ATCTACAAAGCAGAA GGGGGGACTT TGA AAGTTCCCCC TCCTTTCCCACCTCA TERM 2242 1537495 - 1537459 - T 90 -9.5 -4.73388 | overlap 1537463 AACTCGGAGCAAAAA GGGAGCTTTTTTCACCT TAA AGGTAGAAAAAGCCGCC ACAAAGGTTCGTCGC TERM 2243 1537491 - 1537463 - T 74 -9.7 -2.86601 | overlap 1537459 CGGAGCAAAAAGGGA GCTTTTTTCACCT TAA AGGTAGAAAAAGC CGCCACAAAGGTTCG Ctha_1311 1540106 - 1537650 - | TPR repeat-containing protein TERM 2244 1539067 - 1539049 - G 79 -10.3 -3.58536 | opp_overlap 1539049 1539037, overlap 1539037 AAAGCCAGCGGCAAA TCGCCGA GCGCT TCGGCGA TTTCATCCGCGCCTT TERM 2245 1539049 - 1539067 + g 86 -11 -3.73072 | opp_overlap 1539037 1539049, overlap 1539037 AAAGCCAGCGGCAAA TCGCCGAG CGC TTCGGCGA TTTCATCCGCGCCTT Ctha_1312 1541584 - 1540451 - | ABC-2 type transporter Ctha_1313 1542702 - 1541596 - | ABC-2 type transporter TERM 2246 1542226 - 1542256 + g 87 -10.4 -4.08064 | overlap 1542246 GAACATCATTTTTAA TTCCGGCTCAATGC GGA GCATCTGGCCGGAA TTTTCGGACAAACTT Ctha_1314 1543469 - 1542732 - | ABC transporter-related protein TERM 2247 1542810 - 1542832 + g 74 -5.5 -4.65895 | overlap 1542811 AGTTGATTTCAGGTT GCGAGGCGT GTCCA ATGCCTCGA TTTTTCCGTCGACCA TERM 2248 1542811 - 1542831 + g 70 -9 -3.39216 | overlap 1542810 GTTGATTTCAGGTTG CGAGGCGT GTCCA ATGCCTCG ATTTTTCCGTCGACC Ctha_1315 1544406 - 1543462 - | ABC transporter-related protein Ctha_1316 1544900 - 1544403 - | hypothetical protein Ctha_1317 1545961 - 1545068 - | putative ABC transport system, lipoprotein Ctha_1318 1547234 - 1545963 - | outer membrane efflux protein TERM 2249 1546534 - 1546552 + g 79 -8.9 -4.11027 | opp_overlap 1546532 TTAGGCTTATAAGCC GGTTTGG GCAAA CCAAACC TTGTATTTTTGGTAA TERM 2250 1547255 - 1547269 + r 80 -2.8 -5.65513 | opp_overlap 1547255 TATCGCGTTAAGAAT GAGTTT CGG AATCTC TTTTTTTCGTTCGTC Ctha_1319 1547842 - 1547231 - | transcriptional regulator, TetR family Ctha_1320 1549287 - 1547977 - | glycosyl transferase, group 1 TERM 2251 1548631 - 1548643 + g 76 -4.9 -4.77438 | ATTCACATCGGGATA TTTTG CCG CAAAA TTTTTAATAATGCCT TERM 2252 1548778 - 1548760 - G 86 -8.8 -4.41348 | CGGTGTTGAAAGAAA TCCCGACC AAG GGTCGCGA AATCCGGCAATCCAA Ctha_1321 1550069 - 1549353 - | hypothetical protein TERM 2253 1549398 - 1549409 + g 80 -7.2 -4.57073 | opp_overlap 1549398, overlap 1549392 TGTTCCGATGCGAAA CGCG GCTT CGCG TTTTTCCGGCGGGTC TERM 2254 1549829 - 1549846 + g 74 -3.3 -5.02476 | overlap 1549830 1549831 TGGTCTCTTCATCTT TGGGCGT GCGC ACGCCGG TTTTTTCGCGGATGT Ctha_1322 1550357 - 1550581 + | ribosomal protein L28 TERM 2255 1550617 - 1550642 + F 95 -5.5 -5.72622 | gap 1 AGATTCGTGTTTAAA TGCTCAATCAGA CTC TC-GGTTGGGCA TTTTTTATTTATAGG Ctha_1323 1550684 - 1551124 + | Ribonuclease H TERM 2256 1551730 - 1551743 + G 72 -5.9 -4.50159 | AATTTATCGTACCGA CCCGC GCTT GTGGG TTTCTTTAACTTCGC Ctha_1324 1551149 - 1552258 + | hypothetical protein TERM 2257 1552443 - 1552427 - g 70 -2.2 -4.9218 | opp_overlap 1552427 1552428, overlap 1552428 GAGCGAGTATAAAAA TCACCA AATCG TGGTGC TTTATTTTTATCCGA TERM 2258 1552427 - 1552443 + G 70 -2.2 -4.96501 | opp_overlap 1552427 1552428, overlap 1552428 GAGCGAGTATAAAAA TCACCA AATCG TGGTGC TTTATTTTTATCCGA Ctha_1325 1552272 - 1552790 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 2259 1552944 - 1552934 - f 71 -3.2 -5.07652 | GCTTGCAAAAGAAAA CAGC ATG ACTG CAATTTTGCCGGCGG TERM 2260 1554267 - 1554257 - g 77 -6.8 -4.55295 | opp_overlap 1554256 1554257, overlap 1554239 CTTCTTAGAAAGAAA GCTC AGG GAGC ATTTCGGCTTTGAAG Ctha_1326 1553010 - 1554317 + | small GTP-binding protein Ctha_1327 1554783 - 1555877 + | protein of unknown function DUF59 TERM 2261 1555893 - 1555920 + F 91 -9.1 -4.91712 | opp_overlap 1555897 TTTTGAAGATTTGAA GCGAGCTTGGG TTGCAT TCCAAGCCCGC TTTTTCTAAATTGGC Ctha_1328 1555980 - 1556267 + | nitrogen-fixing NifU domain protein TERM 2262 1556298 - 1556327 + F 100 -10.1 -5.46698 | opp_overlap 1556298 CGATAGTTTTCAAAA GCGTTCAATTGCA AATT TGTGATTGAGCGC TTTTTTCGTTTTCAG TERM 2263 1557046 - 1557064 + G 73 -11 -2.61004 | opp_overlap 1557045 1557046, overlap 1557033 1557045 1557044 CGGCGTTTGCAAAAG GCGTTTCG TTT CGAAGCGC GATTTTTCGACATGC Ctha_1329 1556406 - 1557338 + | binding-protein-dependent transport systems inner membrane component TERM 2264 1557672 - 1557654 - g 72 -3.1 -5.06585 | gap 1 GAAATCATAGAAAAA TGCCTCGC GCAC ACG-GGCA AATCCATTCGAATTG TERM 2265 1558011 - 1558021 + G 80 -5.4 -5.02421 | overlap 1558004 GAAGTTGCCGTTCAT TCGA TGG TCGA TTTCTTTTTGCTTTT Ctha_1330 1557453 - 1558511 + | LAO/AO transport system ATPase TERM 2266 1558602 - 1558586 - f 100 -10.8 -5.93252 | CCCAAAAATAAAAAA GCCGCC TTGCC GGCGGC CCTAACAAAAACAAA TERM 2267 1559600 - 1559590 - g 70 -2.4 -5.06414 | opp_overlap 1559591 1559596 GTTGCGCAAGAAAAA CCGC CTG GCGC TGAAAGTGGTCAGTG Ctha_1331 1558871 - 1559674 + | heat shock protein DnaJ domain protein TERM 2268 1559697 - 1559719 + F 91 -6.9 -5.47399 | gap 1, overlap 1559697 1559698 TACGCGCCATCCTTT G-GCCGCACG AGCA CGCGCGGCGC TTTTTTTAACCTTGA TERM 2269 1559697 - 1559718 + F 72 -7.1 -3.87355 | overlap 1559697 1559698 TACGCGCCATCCTTT GGCCGCACG AGCA CGCGCGGCG CTTTTTTTAACCTTG TERM 2270 1559698 - 1559717 + F 77 -10.6 -2.91328 | overlap 1559697 1559697 ACGCGCCATCCTTTG GCCGCACG AGCA CGCGCGGC GCTTTTTTTAACCTT TERM 2271 1560029 - 1560013 - g 78 -6.5 -4.66535 | overlap 1560016 1560017 AAGTCCTAAAAGAAA TTAGCGG CCA CCGCGAA TGGACGGAAGATTTT Ctha_1332 1559840 - 1560941 + | hypothetical protein TERM 2272 1561106 - 1561124 + F 93 -5.2 -5.81412 | GAAGTTTGTCTCCGC TCAGCCAG CTA CAGGTTGA TTTTTTTTGCGTAAA TERM 2273 1561171 - 1561207 + F 100 -8.9 -5.2197 | gap 1, opp_overlap 1561169 TAAAACGAATTTATA GGGCCGACTTTCTGAA AATATC TTCGGAAA-TCGGCTC TTTTTCATTTTTATG Ctha_1333 1561220 - 1561903 + | HhH-GPD family protein TERM 2274 1562236 - 1562260 + T 100 -10.1 -5.47218 | opp_overlap 1562234 1562232 1562236 GTTTTGCAAAATAGA GCTTCAACGAG CGT TTTGTTGAAGC TTTTTTTACGTCCAC TERM 2275 1562285 - 1562295 + T 75 -3.2 -5.27709 | GTCCACTCGACTTTT CAGG TTT TCTG TTTCTTTTTTTGTGC Ctha_1334 1563555 - 1562284 - | hypothetical protein TERM 2276 1562920 - 1562931 + g 91 -2.2 -5.86965 | gap 1, opp_overlap 1562891 1562908 ATAGTCGCGAATGGC GCGCG CAA CG-GC TTTTTTTTGCTCGCT TERM 2277 1563057 - 1563037 - G 79 -2.5 -5.51165 | opp_overlap 1563027, overlap 1563027 AAAAGCGGAAAAAAA TTTGCCGTA TTG TCCGGTAAA ATCCTCATGGTGCAC TERM 2278 1563235 - 1563247 + g 71 -7.7 -3.96497 | GGCTTTTTCAAGCTT CATGG TCG CCATG TTGTTGTCGTTTTGG Ctha_1335 1565116 - 1563605 - | hypothetical protein TERM 2279 1565161 - 1565184 + r 100 -10.4 -5.63517 | gap 1, opp_overlap 1565164 1565166 GGACTGTTTTTGCAA TCACAGGCTGC GCC GCAGC-TGTGA TTTTTTATTTCGGAA Ctha_1336 1566162 - 1565320 - | hypothetical protein TERM 2280 1565719 - 1565739 + g 89 -5.5 -5.63504 | AACAGTTCGATCGAT GATTTGC GCTTTTG GCAAATC TTTTTTTGTCGGATT TERM 2281 1566178 - 1566204 + r 77 -6.5 -4.63184 | overlap 1566179 TTCTCTCCGCGATTG CGGCCATTTGC CCTGC GCAAACGGCCA TTTTTAAACTGCGTT TERM 2282 1566179 - 1566203 + r 78 -10 -3.37188 | overlap 1566178 TCTCTCCGCGATTGC GGCCATTTGC CCTGC GCAAACGGCC ATTTTTAAACTGCGT Ctha_1337 1566964 - 1566269 - | protein of unknown function DUF159 TERM 2283 1566498 - 1566469 - G 72 -6.4 -4.36914 | opp_overlap 1566492 TCGCTGGTGATAAAA TGGCCGGCATTC GATTGT GAATGCTTGCCA TCAGCGAGTTTGGCT TERM 2284 1567340 - 1567322 - g 72 -3.1 -5.055 | opp_overlap 1567322, overlap 1567323 GCAACGGCGAAAAAA CGCTC GGCGAACTT GAGCG TGTGCTGGAGATTTT TERM 2285 1567594 - 1567575 - g 79 -2.8 -5.41143 | overlap 1567576 GACGCTGGAAAAAAA TCCCGAAC TGAA ATTCTGGA CGGGCGCGCTTTCCG Ctha_1338 1567135 - 1567968 + | metallophosphoesterase Ctha_1339 1568078 - 1569010 + | dihydropteroate synthase TERM 2286 1569445 - 1569467 + G 76 -8.4 -4.03234 | opp_overlap 1569454 CGCGTTGATTGTGTT TGCGCGAAAC ACC GGTTTGCGCA TTTATGTAGAAACCG Ctha_1340 1569050 - 1569838 + | protein of unknown function DUF147 TERM 2287 1570542 - 1570525 - g 72 -2.6 -5.03715 | overlap 1570526 ACGACCTTGAAAAAA CGGCGC TTCAAT ACGCCA TTCGCGCCAACGAGC TERM 2288 1571564 - 1571546 - g 90 -14.6 -3.29471 | TTTGGAGGAGATGAA CGAGTCGG CGC CCGACTCG GCGGCGCGAATGAAA TERM 2289 1572086 - 1572075 - g 76 -2.2 -5.37593 | TTGGAAACCAAAAAA TCCG ATTA CGAA ACCCAAATGGCCGAA Ctha_1341 1570269 - 1572212 + | ABC transporter-related protein Ctha_1342 1572774 - 1572298 - | nucleic acid-binding protein contains PIN domain-like protein Ctha_1343 1573046 - 1572771 - | hypothetical protein Ctha_1344 1573360 - 1573109 - | hypothetical protein Ctha_1345 1573610 - 1573368 - | hypothetical protein TERM 2290 1574472 - 1574456 - g 74 -3.7 -5.00884 | AGCTTGCTGAAAAAA TTGGC ATCCATA GCCAA ACCGAACGCCAAGTT TERM 2291 1575051 - 1575069 + G 74 -3.8 -5.00616 | overlap 1575020 AAACAATCCGAGCGG CTGGCTGA CCT TCAATCAG TTTTTTGCCAGAGAG TERM 2292 1575264 - 1575274 + G 91 -8.2 -5.00851 | ATATCAAGATACGTT CGCC GGT GGCG TTTTCTTTCATTGCT Ctha_1346 1573993 - 1575750 + | phosphatidylserine decarboxylase-related TERM 2293 1575788 - 1575811 + T 91 -7.4 -5.36441 | opp_overlap 1575788 TGTGAAAATGAAAAA GCCCCTTG CTAAAACA CGAGGGGC TTTTTTGTATCAAAA TERM 2294 1575811 - 1575788 - T 80 -5.9 -5.0925 | opp_overlap 1575788 TGTGAAAATGAAAAA GCCCCTTGC TAAAAC ACGAGGGGC TTTTTTGTATCAAAA Ctha_1347 1577233 - 1575836 - | aspartate kinase TERM 2295 1576608 - 1576629 + g 74 -5.7 -4.56775 | opp_overlap 1576590 GCTGAGTAATCCGAG CCGCCGCGC CCCA GCGTTGTGG TTTTTCCGGCGCGAT Ctha_1348 1577790 - 1579343 + | response regulator receiver protein Ctha_1349 1579356 - 1579769 + | hypothetical protein TERM 2296 1579838 - 1579801 - f 100 -13.7 -4.24342 | gap 1, opp_overlap 1579808 1579809 TTTTTCATGAACAAA TTG-CAAGAGCGTTCC GCGTTTT GGAACGCTCTTGACAA TGAAATGCGCCTCCT TERM 2297 1580885 - 1580865 - g 81 -5.3 -5.18726 | GCGGTATAACAAAAA GCGGCCAGA TCA TTTGGACGC CGCCGCAAGAAACCG Ctha_1350 1579919 - 1580905 + | KWG Leptospira repeat protein TERM 2298 1580965 - 1580915 - T 100 -12.6 -4.91977 | opp_overlap 1580933 GATTAAAATAGAAAA GCGAGACGAAGCATTTTTCAGCAA AAC TTGCTGTTTATTTCTTCGTCTCGC TGAAACCTAAAAATG TERM 2299 1580933 - 1580947 + T 88 -8.6 -4.71791 | opp_overlap 1580915 AGACGAAGCATTTTT CAGCAA AAC TTGCTG TTTATTTCTTCGTCT Ctha_1351 1582224 - 1581004 - | hypothetical protein TERM 2300 1582452 - 1582468 + H 74 -5.1 -4.94262 | CGCCCAAGCGGAACG GCTTTTG GCT CAGGAGC TTTATTTTTAGTATG TERM 2301 1583630 - 1583618 - g 74 -6.9 -4.35524 | GCCCGAAATGGAAAA GCGCG TTT CGCAC TACAAAGGCAAGCTT TERM 2302 1584201 - 1584213 + G 71 -6.9 -4.09685 | opp_overlap 1584199 TATGTTAGTCAAACG GTGGC GCA GCCGC TTTTCCAAGATGCGA Ctha_1352 1582620 - 1584368 + | ribonuclease, Rne/Rng family Ctha_1353 1584417 - 1585289 + | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase TERM 2303 1585687 - 1585664 - f 70 -8.1 -3.36273 | overlap 1585676 CCGTGTTAAGAGCAA GGGGGGAAC ACATAG GTTCGCCCC TACAAAATCAACCGC TERM 2304 1585714 - 1585735 + F 82 -11.6 -2.90813 | opp_overlap 1585699, overlap 1585711 CCGCCACCGATTTAG GGGCAGAC CTACGT GTCTGCCC TGCTTTGACGGCATC TERM 2305 1585828 - 1585840 + F 74 -9.1 -3.65294 | overlap 1585824 ATCGGCTCAGATTGG CACGG ATT CCGTG TTACTTTGTGTCCAA Ctha_1354 1585941 - 1586195 + | MoaD family protein Ctha_1355 1586196 - 1586582 + | molybdopterin biosynthesis MoaE protein Ctha_1356 1587095 - 1586622 - | AIG2 family protein Ctha_1357 1588418 - 1587111 - | 3-phosphoshikimate 1-carboxyvinyltransferase Ctha_1358 1588782 - 1588585 - | ribosomal protein S21 Ctha_1359 1589429 - 1588824 - | hypothetical protein TERM 2306 1589194 - 1589207 + g 73 -2.3 -5.1963 | overlap 1589195 GACTCTGTGGAAGCG GCTGC CTTA GCAGG TTTTTCTTGCTTGCC TERM 2307 1589418 - 1589429 + g 74 -5.8 -4.65032 | ATTGACATTTTTCGT GTGG CTTT CCAC TTTCTTTCTGCTTTC Ctha_1360 1590342 - 1589683 - | Carbonate dehydratase TERM 2308 1590399 - 1590417 + H 70 -7.4 -3.81022 | overlap 1590408 ACCACTGCATTTGAG CGGCTC CGCTAAC GAGCCG TTATTATAAGCGTTT TERM 2309 1590667 - 1590693 + H 79 -5.2 -5.21683 | opp_overlap 1590678, overlap 1590668 1590669 1590674 AAGACGCGGCTCTTT TTCTTGCAAAAG CCT TTTTTGCAAGGC TTTCTTTTTTTGCGT TERM 2310 1590668 - 1590692 + H 74 -8.7 -3.7057 | opp_overlap 1590678, overlap 1590667 1590669 1590674 AGACGCGGCTCTTTT TCTTGCAAAAG CCT TTTTTGCAAGG CTTTCTTTTTTTGCG TERM 2311 1590669 - 1590691 + H 74 -10 -2.80715 | opp_overlap 1590678, overlap 1590668 1590667 1590674 GACGCGGCTCTTTTT CTTGCAAAAG CCT TTTTTGCAAG GCTTTCTTTTTTTGC TERM 2312 1590674 - 1590697 + H 83 -3.9 -5.57054 | opp_overlap 1590678, overlap 1590669 1590668 1590667 GGCTCTTTTTCTTGC AAAAGCCTT TTTTGC AAGGCTTTC TTTTTTTGCGTTATT TERM 2313 1591208 - 1591190 - g 79 -11.7 -3.18366 | overlap 1591188 1591186 TTGCGAAGGAATAGA CGCGTCG TATGT CGACGCG CGAAAATTAATTCGC TERM 2314 1591310 - 1591325 + G 74 -6.8 -4.20516 | overlap 1591303 ATCCGATTCTGCCTT GCCGGT TGTC ACTGGC TTTATTGCGTCCGCC Ctha_1361 1590765 - 1593224 + | aspartate kinase TERM 2315 1593268 - 1593250 - T 100 -14.6 -5.93252 | opp_overlap 1593250, overlap 1593228 TGGAAAAACAAAAAA GCCCGCAT TCA ATGCGGGC TTTTTATTTTGATGA TERM 2316 1593250 - 1593268 + T 100 -14.6 -5.50723 | opp_overlap 1593228 1593250 TGGAAAAACAAAAAA GCCCGCAT TCA ATGCGGGC TTTTTATTTTGATGA Ctha_1362 1593582 - 1593295 - | hypothetical protein TERM 2317 1593419 - 1593435 + g 75 -6.5 -4.386 | overlap 1593410 TCTTTTGCCGCATCA GCCGC TTCCTTC GCGGC TTTTCTGGCGGATTC Ctha_1363 1593897 - 1593619 - | acylphosphatase Ctha_1364 1596031 - 1593929 - | ATP-dependent metalloprotease FtsH TERM 2318 1596559 - 1596544 - g 70 -2.4 -5.00616 | TTCGTCCGCAAAAAA GCCTCG ATGA CACGGC AAAAGTGCTTTATAA TERM 2319 1598340 - 1598354 + G 77 -3.5 -5.24129 | GCGCTCAAATTGAAA TTCGG ATTGG CCGGA TTTTTTATGACCGAC Ctha_1365 1596222 - 1598639 + | hypothetical protein TERM 2320 1598759 - 1598740 - g 71 -3.5 -4.84353 | ATAAACGAAAAGAAA TTGAGGC GTTGAA GCCGCAA AATTTCAAAAAGCAA TERM 2321 1598840 - 1598858 + G 77 -10.2 -3.34013 | opp_overlap 1598838 1598839 GCTTCGGCGAAAAGC GCCCAGCG AGC CGCTGCGC TTGATTGCCGAGCTG TERM 2322 1598881 - 1598910 + G 70 -10.1 -3.05522 | gap 1, opp_overlap 1598880 1598881 1598883, overlap 1598880 1598883 CCGAGCTGAAAAAGG CAT-CGCCATCGCG CGG CGTGATGGTGCATG ATTTTAAGCCGCTTG TERM 2323 1599087 - 1599117 + G 81 -8.3 -4.48987 | opp_overlap 1599090 GAAAGCCAGATTTAT GAAGCGCGGCT TTTGGGTGC AGACGCGCTTC TTTTGATTGTCGCGG Ctha_1366 1598697 - 1599479 + | Indole-3-glycerol-phosphate synthase TERM 2324 1599503 - 1599518 + F 70 -4.7 -4.62783 | TCGCCTAAGTTATTC GATGG GTGAAG CCATC TTTTTCCACTGGATG TERM 2325 1599558 - 1599548 - f 77 -6.8 -4.56597 | opp_overlap 1599553, overlap 1599549 GGCTTCGCCTAAAAA TGCG CGT CGCA CTTGCCACTCTTGCG TERM 2326 1599699 - 1599689 - f 81 -5.4 -5.27335 | TTCCCTAAACAAAAA TCCA CGA TGGA CATGTGCGCTTAAAA TERM 2327 1599945 - 1599935 - g 70 -2.4 -4.98255 | opp_overlap 1599937, overlap 1599937 CTTGAAGCACAAAAA GCCG ATG CTGC CCTCGTTGCTGATTT Ctha_1367 1599764 - 1600198 + | hypothetical protein TERM 2328 1601400 - 1601421 + G 79 -9.5 -3.70109 | gap 1, opp_overlap 1601412 1601413, overlap 1601400 AATCTATCGGACGCT GG-CTGAGGA CAA TCCTCAGGCC TTCTTGCCTGATGTA TERM 2329 1601538 - 1601559 + G 75 -9.5 -3.63073 | gap 1, opp_overlap 1601551, overlap 1601538 AATCTATCGGACGCT GG-CTGAGGA CAA TCCTCAGGCC TTCTTGCCCGATGTG Ctha_1368 1600204 - 1602348 + | TPR repeat-containing protein TERM 2330 1602405 - 1602417 + G 71 -6.9 -4.07568 | AAGGAATTGGTGGCA GCGTG GGT CGCGC TTTTCAACGCGGGCG Ctha_1369 1602369 - 1602743 + | protein of unknown function DUF1486 TERM 2331 1602741 - 1602757 + T 85 -2.9 -5.72207 | opp_overlap 1602744 CCGATTCCAAACGAA TGAGGCG CGG CGCGTTA TTTTTTTAATTTGGG Ctha_1370 1603888 - 1602755 - | binding-protein-dependent transport systems inner membrane component TERM 2332 1604016 - 1603996 - R 100 -9 -5.75538 | opp_overlap 1603996 CCGAAAAAAGAAAAA GCTGCCCT GAAAT AGAGCAGC TTTTTGGCAAATAAA TERM 2333 1603996 - 1604016 + r 83 -7.5 -4.58395 | opp_overlap 1603996 CCGAAAAAAGAAAAA GCTGCCCTG AAA TAGAGCAGC TTTTTGGCAAATAAA Ctha_1371 1604901 - 1604077 - | light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein Ctha_1372 1606582 - 1604969 - | light-independent protochlorophyllide reductase, B subunit TERM 2334 1605022 - 1605032 + g 73 -4.6 -4.86731 | CTTCCGCCGTAATCG TGGC GTA GCCG TTTTCTTTGGCAAAG TERM 2335 1606739 - 1606725 - R 73 -2.8 -5.28176 | CCCATCGATAAAAAA GAATCG TTG CCATTC TGAGCCAAAGGTGAA Ctha_1373 1608182 - 1606923 - | light-independent protochlorophyllide reductase, N subunit TERM 2336 1607628 - 1607616 - G 72 -4.8 -4.62069 | overlap 1607600 1607599 GTTGGACGGCAAAAA TCCG CCAAC CGGA ATCCCGAGCGCTTCG Ctha_1374 1608821 - 1609639 + | Peptidase M23 Ctha_1375 1609650 - 1610099 + | protein of unknown function DUF583 Ctha_1376 1610109 - 1610384 + | hypothetical protein TERM 2337 1610401 - 1610378 - f 71 -3.1 -5.08831 | overlap 1610380 TAAGAAAAAAAATAA CCCCTAACA GTTTTT CGTTAGGCG ATGGTGATAACGCTT Ctha_1377 1610479 - 1610841 + | hypothetical protein TERM 2338 1610849 - 1610835 - f 73 -2.9 -5.30686 | AACAGTTACAAAAAA CAAAT GATTT ATTTG CATAACAAACGAAAA Ctha_1378 1610838 - 1611839 + | ATP synthase F0, A subunit Ctha_1379 1611936 - 1612169 + | ATP synthase F0, C subunit TERM 2339 1612214 - 1612235 + F 73 -7.3 -4.13183 | gap 1, opp_overlap 1612206 1612214, overlap 1612206 1612204 GAGACAATAAAGCGA CGGCGTTTCA TTC TGAG-CGCCG TTTGCTTTAAATTTT Ctha_1380 1612282 - 1612809 + | ATP synthase F0, B subunit Ctha_1381 1612830 - 1613381 + | ATP synthase F1, delta subunit Ctha_1382 1614051 - 1613662 - | protein of unknown function UPF0102 Ctha_1383 1614719 - 1614105 - | Ribonuclease H TERM 2340 1614648 - 1614630 - G 76 -11.7 -2.62463 | overlap 1614629 CGCAGCAGCGACAAC CGGTCCG GCAAG CGGACCG CGGCCAACCTCATCA Ctha_1384 1614976 - 1616112 + | hypothetical protein TERM 2341 1616876 - 1616895 + G 71 -7 -4.17523 | opp_overlap 1616865, overlap 1616865 GAAACTCCTCTGCAG CGGCACGC TTCA GCGAGCTG TTTTGGACCTTATTT Ctha_1385 1616409 - 1617974 + | 5-oxoprolinase (ATP-hydrolyzing) TERM 2342 1618488 - 1618514 + G 72 -9.3 -3.61764 | ATGTAATTCCGCTCG GCACAGCGCCC ATGCA GCGCGCGGTGC TTTCCGGCTTGCTCG Ctha_1386 1618124 - 1619080 + | Alcohol dehydrogenase GroES domain protein TERM 2343 1619941 - 1619931 - g 82 -6.8 -4.88736 | opp_overlap 1619929 CATTAGCTATAAAAA TGCC AAA GGCA TCTCGGTTTTGGAAA TERM 2344 1620610 - 1620587 - g 84 -7.4 -4.74103 | opp_overlap 1620602, overlap 1620588 TGTTCAAGGGAAAAA TTTCGCACGA GTTT TCGCGCGAAG CCGTTTTGCAAGGCC TERM 2345 1620609 - 1620588 - g 79 -10.9 -3.4398 | opp_overlap 1620602, overlap 1620587 GTTCAAGGGAAAAAT TTCGCACGA GTTT TCGCGCGAA GCCGTTTTGCAAGGC Ctha_1387 1619128 - 1620675 + | ABC transporter-related protein Ctha_1388 1620831 - 1621961 + | Tetratricopeptide TPR_2 repeat protein TERM 2346 1621989 - 1622009 + T 100 -12.6 -5.04601 | opp_overlap 1621989 ACTGAAAACCAAAAA GCCCTGCT AAACA AGCAGGGC TTTTTCATTTATAAA TERM 2347 1622009 - 1621989 - T 100 -12.6 -5.10154 | opp_overlap 1621989 ACTGAAAACCAAAAA GCCCTGCT AAACA AGCAGGGC TTTTTCATTTATAAA Ctha_1389 1623544 - 1622048 - | cyclic nucleotide-binding protein TERM 2348 1624235 - 1624204 - R 85 -9.4 -4.30448 | gap 1, opp_overlap 1624204 AAATCTAATGCAAAA GCCTCCC-GTGCAGA ACT TCCGCGCCGAGAGGC TTTTTGGCTAAAAAA TERM 2349 1624204 - 1624235 + r 79 -7.2 -4.65895 | gap 1, opp_overlap 1624204 AAATCTAATGCAAAA GCCTC-CCGTGCAGA ACT TCCGCGCCGAGAGGC TTTTTGGCTAAAAAA Ctha_1390 1626168 - 1624264 - | Phosphoenolpyruvate carboxykinase (GTP) TERM 2350 1624785 - 1624799 + g 82 -5.6 -5.24129 | GATTGCCGGTTGAGC CAGCCG CCG CCGCTG TTTTTTCTGAGCCCA Ctha_1391 1626862 - 1626269 - | DoxX family protein TERM 2351 1627091 - 1627107 + H 79 -8.7 -3.97622 | CCAAGGTAAGCACTT TGCGGAG TAG CTCTGCA TTCTATTTTAAATAC TERM 2352 1627132 - 1627159 + H 71 -4.2 -4.8143 | gap 1, overlap 1627132 1627133 AAATACTTCTCATTT G-TTGCGCCTTTT GCC GAAAGTCGCAAAC TTTTTAGATTCTTGC TERM 2353 1627854 - 1627844 - g 76 -4.6 -4.98531 | TCGTGAAATCAAAAA CAGG CTG CCCG ACATCGGCAAAAAAG TERM 2354 1627901 - 1627926 + G 76 -2 -5.41143 | gap 2, opp_overlap 1627892 1627901 1627890 CGAAGACCTTGACAA GCT-TTC-GCTT AGCA AAGCCGAAGAGC TTTTTTTCAAACATA Ctha_1392 1627227 - 1628564 + | hypothetical protein TERM 2355 1630013 - 1630001 - g 70 -2 -5.08088 | AACGGGCAATAAAAA TTCT GGAAG AGAA ATTGGGTGACGGCCA Ctha_1393 1628557 - 1630473 + | Tetratricopeptide TPR_2 repeat protein TERM 2356 1631171 - 1631156 - g 81 -3.3 -5.40474 | ATGCGTTTAAAAAAA TTGAG GAAATT CTCAA AAAAAGCTTTGTTCA Ctha_1394 1630630 - 1631196 + | RNA polymerase, sigma-24 subunit, ECF subfamily Ctha_1395 1631199 - 1631852 + | hypothetical protein Ctha_1396 1631874 - 1632440 + | hypothetical protein TERM 2357 1632484 - 1632457 - T 91 -8.5 -5.03145 | opp_overlap 1632462 1632479, overlap 1632462 TAATCGGTTAAAAAA GAAAAGCGGCT TTTTTC AGCCGCTTTTT CATTTGAATTAAAAA TERM 2358 1632462 - 1632479 + T 90 -8.4 -5.01042 | opp_overlap 1632462 1632457 GGTTAAAAAAGAAAA GCGGCT TTTTTC AGCCGC TTTTTCATTTGAATT TERM 2359 1632479 - 1632462 - T 100 -8.4 -5.42198 | opp_overlap 1632462, overlap 1632457 GGTTAAAAAAGAAAA GCGGCT TTTTTC AGCCGC TTTTTCATTTGAATT Ctha_1397 1633016 - 1632504 - | Ferritin Dps family protein TERM 2360 1633259 - 1633239 - R 93 -9.7 -5.13741 | opp_overlap 1633239 TTAATCGAATAAAAA GGGGCTTGT TCT AAAAGCCCC TTTCTTGTTTATTCC TERM 2361 1633239 - 1633259 + r 89 -9.7 -4.67968 | opp_overlap 1633239 TTAATCGAATAAAAA GGGGCTTGT TCT AAAAGCCCC TTTCTTGTTTATTCC Ctha_1398 1634164 - 1633301 - | oxidoreductase FAD/NAD(P)-binding domain protein TERM 2362 1635082 - 1635100 + G 72 -8.9 -3.53012 | TAAAGATTGGGGCGG TTTCGGC AACGC GCCGAAA TTTCCGCGACCGGCG TERM 2363 1635171 - 1635157 - g 80 -5.6 -5.01811 | TCATCAAACCAAAAA CGAGGC CGC GCTTCG AATGGCGCTTCACAC TERM 2364 1635954 - 1635984 + G 88 -3.8 -5.7946 | ATCGTGACGGCGAGA GTGCCATTGACGGC AAG GCCGACGATTACGC TTTTTTTGTTCAGGC Ctha_1399 1634465 - 1636597 + | protein of unknown function DUF255 TERM 2365 1636724 - 1636695 - g 71 -7.1 -4.07568 | gap 1, overlap 1636699 GGCGTCCCTGCAAAA GTCACCGATTCGCC CTC GGAGATTCGG-GAC GCCGACAAACTTTTG TERM 2366 1637196 - 1637173 - g 70 -2.4 -5.03314 | overlap 1637174 TTCATCCCGAAAAAA GCGCTTCCAA CGGA TTAAAAGTGC TGGAGAATTTTGCAA Ctha_1400 1636614 - 1637219 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit TERM 2367 1637832 - 1637821 - g 80 -7.2 -4.56597 | overlap 1637806 1637805 GCCTTTGCGGAAAAA GCGC AAAT GCGC ATCACGGCGTCCGGC TERM 2368 1637950 - 1637966 + G 90 -9.5 -4.41348 | overlap 1637953 GAGGAGCGTTTCCCG TGCCAAA AGC TTTGGCA TTTGTTTGAGGAAAG Ctha_1401 1637254 - 1638042 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase TERM 2369 1638040 - 1638027 - T 75 -2.3 -5.42605 | opp_overlap 1638028, overlap 1638028 TGAACAAAAACAAAA TTCCG TTGC CGGAT AAATTTCATTTTTGT TERM 2370 1638149 - 1638166 + T 81 -7.1 -4.81083 | opp_overlap 1638163, overlap 1638163 AGATAAGGGTTTGAA TTGCTTT GGCT AAAGCAA TTTTTGCTGCTTCCA TERM 2371 1638272 - 1638240 - T 74 -4.9 -4.93547 | gap 1, opp_overlap 1638245 1638245 1638245 1638265, overlap 1638245 TGAAGGAAGGAAAAA CAAAAGGGGCTACC GTTTGT GGC-GCCCCTTTTT GAGAATGGGTTACTT TERM 2372 1638267 - 1638245 - T 82 -4.8 -5.34655 | gap 1, opp_overlap 1638245 1638245 1638245 1638265, overlap 1638240 GAAGGAAAAACAAAA GGGGCTACC GTTTGT GGC-GCCCC TTTTTGAGAATGGGT Ctha_1402 1640150 - 1638282 - | Carbamoyl-phosphate synthase L chain ATP-binding TERM 2373 1638426 - 1638396 - G 71 -7.4 -3.86015 | opp_overlap 1638415, overlap 1638414 GACTGTGGTGACAAA CGGTACGCCGGAAA GAA TTGCCGCCGCGCCG ATGGCCTCCTCGTCG TERM 2374 1638415 - 1638449 + g 72 -4.9 -4.63527 | opp_overlap 1638396 1638414 ACGCCGGAAAGAATT GC-CGCCGCGCCGATGG CCT CC-TCGTCGTAGCGCGC TTTTTCGCCTCGTGG TERM 2375 1640198 - 1640217 + r 71 -9.2 -2.63079 | opp_overlap 1640199, overlap 1640195 CATGAATATAAAAAA ACCCGGCA ACTT TGCCGGGC TGAATTCTGTAAAAA TERM 2376 1640216 - 1640199 - R 100 -12.7 -5.82172 | opp_overlap 1640198 1640195 ATGAATATAAAAAAA CCCGGCA ACTT TGCCGGG CTGAATTCTGTAAAA Ctha_1403 1640475 - 1640260 - | hypothetical protein TERM 2377 1641166 - 1641181 + G 70 -2.4 -5.00616 | opp_overlap 1641166, overlap 1641166 ACCGCGCTGCAAAAT GTGGCG ATGC CGCTTC TTTTTTCGGGCGAAA TERM 2378 1641166 - 1641178 + G 80 -6.9 -4.61482 | opp_overlap 1641166, overlap 1641166 ACCGCGCTGCAAAAT GTGGC GAT GCCGC TTCTTTTTTCGGGCG Ctha_1404 1640815 - 1641561 + | ABC transporter-related protein TERM 2379 1642080 - 1642090 + G 71 -6.8 -4.09551 | TGAATCCGATAGCGC CGAC CAA GTCG TTATTTCTGAAATTT TERM 2380 1642142 - 1642131 - g 71 -7.2 -4.16681 | AATAGGATTTGAAAA GCCG GAAG CGGC CATCAACAAAACGCT TERM 2381 1642419 - 1642405 - g 80 -5.6 -4.99134 | opp_overlap 1642404 1642405 AGCTCAAAGCAAAAA GGCGGA TAT TCGGCC ATTATTGTCAGGGCA TERM 2382 1642454 - 1642440 - g 76 -4.2 -5.0538 | TGTCAGGGCAAAAAA TCAACC GCA GGCCGA AGAATTAAAACACGT Ctha_1405 1641586 - 1642959 + | protein of unknown function DUF214 TERM 2383 1643067 - 1643032 - T 100 -8.3 -5.47218 | gap 1, overlap 1643033 TGGCAGGTAAAAAAA TGCGAAGGCAAAACCG TCATG CGGAT-TGCCTTCGCG AGCAAAATAGTTGGC TERM 2384 1643066 - 1643033 - T 90 -11.8 -3.87608 | gap 1, overlap 1643032 GGCAGGTAAAAAAAT GCGAAGGCAAAACCG TCATG CGGAT-TGCCTTCGC GAGCAAAATAGTTGG Ctha_1406 1643705 - 1643115 - | hypothetical protein TERM 2385 1648820 - 1648804 - g 76 -2.2 -5.28176 | CCGACTTACAAAAAA GCGG TCAGCACAC CCGC CAGCAGCAAAGAGCG Ctha_1407 1644061 - 1651638 + | hypothetical protein Ctha_1408 1653606 - 1651684 - | excinuclease ABC, C subunit TERM 2386 1651717 - 1651728 + g 70 -2.2 -5.00616 | gap 1, opp_overlap 1651707 1651706 1651716 1651717 AAAATGCGCAAAAAT GC-GC TCC GCTGC TTTTTTCCCGACCGC TERM 2387 1651754 - 1651767 + g 70 -2.3 -5.0538 | ACCGCCTCCGCAAGC GCTTC TGCC GATGC TTTTTTGACCTCAGC TERM 2388 1652693 - 1652678 - G 86 -4 -5.61881 | gap 1, opp_overlap 1652678, overlap 1652679 TTTGAAAAATAAAAA TGCTGCG AGC CG-AGCA ATTTCCCGTCGCGCA TERM 2389 1652920 - 1652932 + g 72 -4.7 -4.63527 | GATGTCTTTGGTTTT GCCGC GTA GCAGC TTTTTCACCTCGTCA TERM 2390 1653521 - 1653532 + g 73 -4.4 -4.87273 | AATTTGAATTGAAGT GCTT CCGA AAGC TTTTTCTCCGATGTT TERM 2391 1654303 - 1654328 + G 73 -7.7 -4.0896 | opp_overlap 1654302 1654309, overlap 1654309 GATTGCCAATTTAAC CAAAAATATCG CTGC CGATATTTTGG TTTTGCCCGAGCTTT TERM 2392 1654322 - 1654309 - g 76 -5.3 -4.90013 | opp_overlap 1654303 1654309, overlap 1654302 CAATTTAACCAAAAA TATCG CTGC CGATA TTTTGGTTTTGCCCG TERM 2393 1654309 - 1654322 + G 72 -5.3 -4.67038 | opp_overlap 1654309 1654302, overlap 1654303 CAATTTAACCAAAAA TATCG CTGC CGATA TTTTGGTTTTGCCCG TERM 2394 1654407 - 1654420 + G 83 -6.7 -5.01732 | overlap 1654392 1654417 CCGAATCGCTGGACG GCGAA ACGG TTCGC TTTTTTCAAGCGCTT Ctha_1409 1654214 - 1655014 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Ctha_1410 1655198 - 1657285 + | small GTP-binding protein TERM 2395 1657292 - 1657328 + T 79 -6.6 -4.72696 | opp_overlap 1657298, overlap 1657298 GAGGCTTAGTAATAT GAGAAAGGCGTGCTGT CCAAA ATGGCACGCCTTTGTA TTCTTTTTGTTTGAA TERM 2396 1657298 - 1657322 + T 89 -10 -4.48869 | opp_overlap 1657298, overlap 1657292 TAGTAATATGAGAAA GGCGTGCTGT CCAAA ATGGCACGCC TTTGTATTCTTTTTG Ctha_1411 1658167 - 1657373 - | Dolichyl-phosphate beta-D-mannosyltransferase TERM 2397 1658248 - 1658223 - R 100 -11.2 -5.38497 | opp_overlap 1658223 ATGTAAACTAAAAAA GCATTGCCCC AAAAGA GAGGCAATGC TTTTTATATGTAAAC TERM 2398 1658223 - 1658248 + r 91 -9 -5.03994 | opp_overlap 1658223 ATGTAAACTAAAAAA GCATTGCCCC AAAAGA GAGGCAATGC TTTTTATATGTAAAC Ctha_1412 1658610 - 1658275 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 2399 1658666 - 1658684 + r 72 -5.4 -4.57073 | AATATAAACACTCTT TTGTTTGT TCC ATAAACAA TTTTTCCCAAGCCTG TERM 2400 1658896 - 1658933 + r 100 -10 -5.58209 | gap 1, opp_overlap 1658901 AGCAACAGGCTAAGT AAAAAGGGGGTGATGCT TTTTC AGC-TCGCCCCCTTTTG TTTTTTTAACTTTGA TERM 2401 1658928 - 1658901 - R 86 -7.7 -4.87291 | gap 1, opp_overlap 1658896 CAGGCTAAGTAAAAA GGGGGTGATGCT TTTTC AGC-TCGCCCCC TTTTGTTTTTTTAAC Ctha_1413 1661217 - 1658962 - | photosystem P840 reaction center, large subunit TERM 2402 1659280 - 1659270 - G 71 -6.8 -4.06502 | GATCTTCAAACCAAA CAGC AAA GCTG ACAAACCATACCAAG TERM 2403 1659382 - 1659372 - G 72 -5.4 -4.53765 | ACATATAGTAGAAAA TACC ACC GGTA TAGTGATGCGAAAGC TERM 2404 1660063 - 1660044 - G 76 -9.4 -3.71672 | TGTGATTAAAAGCAA TCAAGTTG ATAA CAACTTGA GCCATGCCGTATGAA TERM 2405 1660694 - 1660672 - G 80 -7 -4.68601 | ACCGAAAATAAGAAA CGAACCACTT AGA AAGTGAATCG CTGCCCACCATAAAA TERM 2406 1661064 - 1661082 + g 76 -8 -4.33274 | overlap 1661060 TCTTTGCTGTTGCCG CCGCCGGC TTT GCTGCCGG TTTTGCTGCTGTAGC TERM 2407 1661355 - 1661379 + r 84 -8.8 -4.38712 | CGTACAAAATGATTT TAATTTTCCA GCAAA TGGAAAATTA TTTTCTGAGAATAAA Ctha_1414 1662495 - 1661452 - | DNA binding domain protein, excisionase family TERM 2408 1662047 - 1662059 + g 100 -7.7 -5.81412 | GAAATAATGTGCTCT TCTGC GAC GCAGA TTTTTTTTGACTCCC TERM 2409 1662783 - 1662759 - R 100 -9.3 -5.66684 | opp_overlap 1662759 CAAGCTATAAAAAAA GCTATCCGCTT TTT ACACGGATAGC TTTTGAAACTCAAAT TERM 2410 1662759 - 1662783 + r 73 -7.2 -4.11394 | opp_overlap 1662759 CAAGCTATAAAAAAA GCTATCCG CTTTTTACA CGGATAGC TTTTGAAACTCAAAT Ctha_1415 1663016 - 1662831 - | hypothetical protein Ctha_1416 1663718 - 1663041 - | transaldolase Ctha_1417 1664805 - 1663753 - | deoxyhypusine synthase TERM 2411 1665073 - 1665050 - H 75 -2.4 -5.45813 | opp_overlap 1665051, overlap 1665051 TACCAAAAAACAAAA TGCCTTTTTT GAAA AAAACAGGCT ACTTTTTTAATATAA TERM 2412 1665217 - 1665207 - H 83 -4 -5.63517 | opp_overlap 1665207 1665214, overlap 1665208 1665214 TGGTTAAAGAAAAAA GTAA ATA TTAC TATTTAGCTATATAG Ctha_1418 1665275 - 1666474 + | beta-lactamase domain protein TERM 2413 1666540 - 1666502 - T 79 -7.4 -4.59853 | opp_overlap 1666508, overlap 1666504 1666508 GCAACGGTGTAAAAA CAGCAACCCCCATACGCA ATT TGTGTATGGGGGTTTTTC GTTTATTCCGCATAT TERM 2414 1666538 - 1666504 - T 83 -10 -3.91164 | opp_overlap 1666508, overlap 1666502 1666508 AACGGTGTAAAAACA GCAACCCCCATACGCA ATT TGTGTATGGGGGTTTT TCGTTTATTCCGCAT TERM 2415 1666508 - 1666534 + T 100 -17.4 -5.09521 | opp_overlap 1666504 1666502 1666508 GTGTAAAAACAGCAA CCCCCATACGCA ATT TGTGTATGGGGG TTTTTCGTTTATTCC TERM 2416 1666534 - 1666508 - T 100 -15.2 -3.60925 | opp_overlap 1666508, overlap 1666504 1666502 GTGTAAAAACAGCAA CCCCCATACGCA ATT TGTGTATGGGGG TTTTTCGTTTATTCC Ctha_1419 1667658 - 1666558 - | hypothetical protein TERM 2417 1666946 - 1666962 + g 78 -6.5 -4.56775 | TCTTCTATTTTTTGT GCCGC TTCCTCT GCGGC TTTTTGGCGCGCCAT TERM 2418 1667356 - 1667376 + g 100 -7.5 -5.65513 | overlap 1667357 GCCGATAATCGCATC TGCGCCCAA TAG TTGCGCGCG TTTTTTTAATTCCTC TERM 2419 1667357 - 1667375 + g 77 -8.8 -3.97681 | overlap 1667356 CCGATAATCGCATCT GCGCCCAA TAG TTGCGCGC GTTTTTTTAATTCCT TERM 2420 1668471 - 1668481 + G 82 -5.4 -5.22312 | TTTCCGCATACGCCG CTCA ATC TGAG TTTTTTCCTGTCAAT Ctha_1420 1667874 - 1668923 + | inner-membrane translocator TERM 2421 1669224 - 1669235 + F 71 -4.4 -4.78157 | AAGTCATTTGTGTGT GCAT ATCA ATGC TTTGTTCTTTTTACT TERM 2422 1669810 - 1669828 + G 71 -7.4 -3.85698 | opp_overlap 1669809 1669806 TTGGCACTGAATTAT TGCATTGC ATT GCAAGGCA TTTATCCACAGCGGC Ctha_1421 1669321 - 1669851 + | Tail Collar domain protein TERM 2423 1669933 - 1669895 - f 86 -11.2 -4.10855 | opp_overlap 1669895, overlap 1669884 AAAATCGCTCTAAAA GCAGGTTACATATTTCTC TGA AAAAAATATGCAGCCTGC TTTTGGAAGTACAAC TERM 2424 1669895 - 1669933 + F 79 -8.3 -4.11216 | opp_overlap 1669884 1669895 AAAATCGCTCTAAAA GCAGGTTACATATTTCT CTGAA AAAAATATGCAGCCTGC TTTTGGAAGTACAAC TERM 2425 1671979 - 1671952 - g 70 -4.8 -4.45083 | CCTACACGTATAAAA TTGCCAGCGAAG ATTA CTCCGGTGTCAA ACATGAATACGAGAA Ctha_1422 1670007 - 1672307 + | Fibronectin type III domain protein TERM 2426 1672337 - 1672352 + T 93 -10.4 -4.98531 | opp_overlap 1672337 TCGCGAAAGTGAAAA GGGGCT GCAA AGCCCC TTTTTCGTTTAGCAC TERM 2427 1672352 - 1672337 - T 87 -10.4 -4.35524 | opp_overlap 1672337 TCGCGAAAGTGAAAA GGGGCT GCAA AGCCCC TTTTTCGTTTAGCAC Ctha_1423 1673500 - 1672403 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase Ctha_1424 1676348 - 1673598 - | Patatin TERM 2428 1674428 - 1674389 - G 72 -3 -5.09259 | overlap 1674392 CATGTGAAAAGAAAA CAAGCGTTTTATAAACAT CGCG ATGTTCATAAAAAACGCG TGTGAAAAAGGTGAG TERM 2429 1674425 - 1674392 - G 74 -5.5 -4.6313 | overlap 1674389 GTGAAAAGAAAACAA GCGTTTTATAAACAT CGCG ATGTTCATAAAAAAC GCGTGTGAAAAAGGT TERM 2430 1674799 - 1674809 + g 78 -5.4 -4.75776 | AAAGTGATTTCTCGG TCGA TAA TCGA TTTTTGCGTTCGCTT TERM 2431 1676240 - 1676257 + g 76 -4.9 -4.73614 | opp_overlap 1676240 1676241, overlap 1676234 1676241 GCGTGTCGGGAAAAA TTTTCTC AGTT GAGAAAG TTTGTTTTGCTCCTG TERM 2432 1676323 - 1676313 - G 76 -2.4 -5.4111 | AACAATCAGAAAAAA GAGC GTC GCAC TGAAATATGTATGTT Ctha_1425 1676510 - 1677349 + | acetyl-CoA carboxylase, carboxyl transferase, beta subunit Ctha_1426 1679415 - 1677493 - | Tetratricopeptide TPR_2 repeat protein TERM 2433 1678009 - 1678023 + g 72 -6.4 -4.2231 | ATCAGAGAGAACCGT GATGGC TTC GTCATC TTTTCCCTCCTGATT TERM 2434 1678309 - 1678346 + g 79 -9.9 -3.75153 | gap 1, opp_overlap 1678321, overlap 1678312 CCGTTGAATTTCCTC CAG-CACCAACAAGGTGG GCT TCACCATGTTGGTGTCCG TTTCAATTCGGCGAA TERM 2435 1678312 - 1678342 + g 86 -14.8 -2.68071 | opp_overlap 1678321, overlap 1678309 TTGAATTTCCTCCAG CACCAACAAGGTGG GCT TCACCATGTTGGTG TCCGTTTCAATTCGG TERM 2436 1678956 - 1678969 + g 73 -4.5 -4.89393 | overlap 1678950 AAGTGATAGCCGAGG CTTGG TTGT CCAGG TTTTTATAGGCTTTA TERM 2437 1679510 - 1679552 + r 86 -8.7 -4.59773 | gap 1, opp_overlap 1679510 1679517, overlap 1679514 AAAAAGCAGCGAAAA TAAAAAAGCCACTAAGTTGC TTTC GTG-CTTAGTGGCTTCTTTA TTTTTAGCGGTAAAA TERM 2438 1679552 - 1679510 - R 86 -10.2 -4.28589 | opp_overlap 1679510 1679514, overlap 1679517 AAAAAGCAGCGAAAA TAAAAAAGCCACTAAG TTGCTTTCGTG CTTAGTGGCTTCTTTA TTTTTAGCGGTAAAA TERM 2439 1679514 - 1679548 + r 74 -5.1 -4.86385 | gap 1, opp_overlap 1679510 1679517, overlap 1679510 AGCAGCGAAAATAAA AAAGCCACTAAGTTGC TTTC GTG-CTTAGTGGCTTC TTTATTTTTAGCGGT TERM 2440 1679545 - 1679517 - R 100 -6.1 -5.80951 | opp_overlap 1679514 1679510, overlap 1679510 AGCGAAAATAAAAAA GCCACTAAG TTGCTTTCGTG CTTAGTGGC TTCTTTATTTTTAGC Ctha_1427 1680932 - 1679577 - | hypothetical protein Ctha_1428 1681852 - 1681166 - | molybdate ABC transporter, inner membrane subunit TERM 2441 1681441 - 1681431 - G 91 -2.4 -5.87688 | opp_overlap 1681431 ATAACCCAAAAAAAA GTGC TCA GCTC ACTTTTTCCCAGTGT Ctha_1429 1682586 - 1681852 - | molybdenum ABC transporter, periplasmic molybdate-binding protein Ctha_1430 1683217 - 1682738 - | hypothetical protein TERM 2442 1683006 - 1683021 + g 80 -5.4 -4.98531 | overlap 1683007 TCCTGTTTGCTGTTC TCAGCA TGGG TGCTGG TTTTTCCTTTGGCGG Ctha_1431 1683566 - 1683198 - | hypothetical protein TERM 2443 1683343 - 1683353 + g 74 -5.4 -4.62441 | TCTGTTTTCTCTACG GAAG GAA CTTC TTTGTTTGTGTCGGC TERM 2444 1683561 - 1683605 + g 76 -9.4 -3.767 | gap 1, opp_overlap 1683561, overlap 1683588 ATAAAACGCCCAATA CTGCATCCAAAAAGGAAC-CC GTTT GGCGATCGTTATTGGATGCAG TTTCATCACTGCATC TERM 2445 1683644 - 1683631 - R 76 -5.3 -4.88407 | opp_overlap 1683588, overlap 1683624 GCATCCAATCAAAAA CCATT CTTG AATGG TAAAATCACTTCACC Ctha_1432 1686067 - 1683650 - | leucyl-tRNA synthetase TERM 2446 1683979 - 1683991 + g 74 -3.3 -5.0925 | opp_overlap 1683952, overlap 1683973 GATTTTCAATCGCTG TGCGG CTG CGGCA TTTTTCCTTTTGAAG Ctha_1433 1686341 - 1687099 + | hypothetical protein TERM 2447 1687522 - 1687500 - f 90 -12.2 -3.7511 | opp_overlap 1687500 1687497 1687497 TCGCTGACAATAGAA TGTTTCTTGA CAC TCAAGAAACA TAACTTGTCGCTCAA TERM 2448 1687500 - 1687522 + F 85 -12.2 -2.6063 | opp_overlap 1687500, overlap 1687497 1687497 TCGCTGACAATAGAA TGTTTCTTGA CAC TCAAGAAACA TAACTTGTCGCTCAA Ctha_1435 1687608 - 1687865 + | hypothetical protein Ctha_1436 1687874 - 1688038 + | YcfA family protein TERM 2449 1688721 - 1688736 + F 70 -2.6 -5.14563 | GCCTTACATTAATTG GATAAA AAGG TTTGTC TTTTTTCATAACAAA TERM 2450 1689266 - 1689244 - f 100 -2.1 -6.08563 | overlap 1689248 AATAGAGAAAAAAAA TACCCAAAT GCAAA ATTTGAATA GAAGTGGCAATATAT Ctha_1438 1689782 - 1690627 + | Methyltransferase type 11 TERM 2451 1691830 - 1691844 + G 83 -4.2 -5.44119 | opp_overlap 1691832, overlap 1691832 CACAATTCTTTTGAA CATGCA CAA TGCAGG TTTTTTTGAAATCAA Ctha_1441 1691759 - 1692316 + | GPR1/FUN34/yaaH family protein TERM 2452 1692345 - 1692371 + T 100 -8 -5.4505 | opp_overlap 1692345 AAAAGTATAAAAAAA GCATCCTGAGTT CTG AAAACAGGATGC TTTTTTATTAACAAA TERM 2453 1692371 - 1692345 - T 100 -8 -5.77632 | opp_overlap 1692345 AAAAGTATAAAAAAA GCATCCTGAGTT CTG AAAACAGGATGC TTTTTTATTAACAAA TERM 2454 1692516 - 1692542 + T 72 -9.5 -2.76815 | opp_overlap 1692516 1692522, overlap 1692522 AATCAAGTTGAAAAA CAAAAAGGGGC GCAAA GCCCCTTTTTC ATTGTTACCAAAAGT TERM 2455 1692542 - 1692516 - T 88 -9.5 -4.68506 | opp_overlap 1692516 1692522, overlap 1692522 AATCAAGTTGAAAAA CAAAAAGGGGC GCAAA GCCCCTTTTTC ATTGTTACCAAAAGT TERM 2456 1692536 - 1692522 - T 100 -8.5 -5.61881 | opp_overlap 1692516 1692522, overlap 1692516 GTTGAAAAACAAAAA GGGGC GCAAA GCCCC TTTTTCATTGTTACC TERM 2457 1692522 - 1692536 + T 90 -8.5 -4.99435 | opp_overlap 1692522 1692516, overlap 1692516 GTTGAAAAACAAAAA GGGGC GCAAA GCCCC TTTTTCATTGTTACC Ctha_1442 1693664 - 1692561 - | Glutamine--scyllo-inositol transaminase TERM 2458 1692892 - 1692906 + g 72 -5.6 -4.43477 | TCGCCGTAAAGCTTC GCGTTG TTC CGGCGC TTTTCATTCCATGCG TERM 2459 1693143 - 1693120 - G 73 -4.6 -4.82901 | gap 1, opp_overlap 1693126, overlap 1693125 1693126 TTGCCCGGATAAAAA CTAAACGCCGT CGC ACGGC-TTTTG CCAGAACCGATTCGC TERM 2460 1693139 - 1693125 - G 72 -5.6 -4.38116 | opp_overlap 1693126, overlap 1693120 1693126 CGGATAAAAACTAAA CGCCGT CGC ACGGCT TTTGCCAGAACCGAT TERM 2461 1693126 - 1693138 + g 79 -9.1 -4.07568 | opp_overlap 1693126 1693125 1693120 GGATAAAAACTAAAC GCCGT CGC ACGGC TTTTGCCAGAACCGA TERM 2462 1693378 - 1693364 - G 74 -7 -4.25104 | CGTTGTCGACCAAAA CCGGCG TTG CGCCCG TTGCCGAAACCGCTT Ctha_1443 1695346 - 1693715 - | carbohydrate kinase, YjeF related protein TERM 2463 1694834 - 1694877 + g 76 -8.9 -3.66095 | opp_overlap 1694830 1694831 CACCTCGGAAAGCGC CGGGCG-CGGCTCGGCTTCAA ATTT TTGAGGC-GGCTCGACGCCCG TTTGCGTAAGGCTTT TERM 2464 1695408 - 1695379 - R 83 -7.9 -4.65933 | overlap 1695375 CATTGGCAAAACAAA GCCACTTCGGATT TGCA AACCCAAAACGGC CCGCTAATTTTTTAA Ctha_1444 1696215 - 1695592 - | peptidase M15D vanX D-ala-D-ala dipeptidase TERM 2465 1695721 - 1695735 + g 83 -6.4 -5.01732 | GTCGTGCAAAATCGT GCGGTT GCG AATCGC TTTTTTAGGCAAATT TERM 2466 1695880 - 1695924 + g 78 -4.9 -5.06414 | opp_overlap 1695892, overlap 1695881 TGAGCCTTTTTTCGG ATTTGCAACATAGCGCCGTAG TTT CGGCGGCGTTGCGTTCCAAAG TTTTTCTTGAGCCGA TERM 2467 1696051 - 1696038 - G 76 -8.1 -4.18018 | CCTTTGGACGCAAAA GGCAG CGCG CTGCC GAATAAATTTTTTCT TERM 2468 1696461 - 1696484 + G 71 -10.4 -2.60988 | CGAATTTTATGCCGT CCATAAAGCG CGTC CGTTTTATGG TGAATTGGTTGAATT Ctha_1445 1696309 - 1696734 + | Nucleoside-diphosphate kinase TERM 2469 1696793 - 1696762 - f 74 -8.8 -3.54424 | gap 1, opp_overlap 1696762 TTGGATTTTTTCAAA GCAATTCGCTGCGCT AAC AAC-CGGCGAATTGC TTTTTTTTATGCAAA TERM 2470 1696762 - 1696793 + F 100 -8.8 -5.93809 | gap 1, opp_overlap 1696762 TTGGATTTTTTCAAA GCAATTCGCTGCGCT AAC AAC-CGGCGAATTGC TTTTTTTTATGCAAA TERM 2471 1697266 - 1697248 - g 71 -9.6 -3.2964 | opp_overlap 1697245 1697243 AAATGCGTTTCAGAA TTTAGCGC CAG GCGCCAAA ACCTGTATCGTGATT Ctha_1446 1697162 - 1697959 + | hypothetical protein TERM 2472 1697965 - 1698017 + F 81 -4.2 -5.47159 | gap 1, opp_overlap 1697949 1697967, overlap 1697949 1697969 CGGCGCGTAAAAATT TAGAGCCGCTCTTCAGC-AAATTCG CAGT TGCATTTGGCAAAAGAGCGGCTTTC TTTTTTCTCTTAGCG TERM 2473 1697969 - 1698013 + F 91 -7.2 -5.19003 | gap 1, opp_overlap 1697949 1697967, overlap 1697949 1697965 GCGTAAAAATTTAGA GCCGCTCTTCAGC-AAATTCG CAGT TGCATTTGGCAAAAGAGCGGC TTTCTTTTTTCTCTT TERM 2474 1699030 - 1698999 - g 89 -10.9 -4.09685 | gap 1 GTTTATTTCGCAAAA GCGCACATCCAGCG TAAAG CGTTGGATG-GCGC ACGCAGAAGGCTATG Ctha_1447 1698220 - 1699314 + | glutamate 5-kinase Ctha_1448 1699449 - 1700183 + | aspartate racemase TERM 2475 1700233 - 1700248 + F 74 -6.2 -4.66953 | CCGCATATTATTTTT CTATCA GTGC TGATAG TTTTTGGAATATTAG Ctha_1449 1700282 - 1700476 + | hypothetical protein Ctha_1450 1700500 - 1701636 + | transposase IS4 family protein TERM 2476 1701774 - 1701736 - T 70 -7.5 -3.56864 | overlap 1701734 AAAAGCTTATAAATA GCCCGTC-ACATGAATCGC TGA GCGAGA-ATGTAGACGGGC ACGATAAATTTTAGC Ctha_1451 1702060 - 1701794 - | phage related protein TERM 2477 1701922 - 1701899 - G 74 -10.4 -3.20858 | gap 1, opp_overlap 1701899 TATTAGACTTACCAA GGTAGCAGCAG CAC CTGCTG-TACC ATGAGCTGCTGATGC TERM 2478 1702294 - 1702319 + G 75 -9.7 -3.57144 | TGAGATAGAGGGTTT TTCGTTGCCGA GCTT TCGGCAGCGCA TTTCGGAGTCCGCGA TERM 2479 1702325 - 1702345 + G 70 -9 -3.34522 | gap 1, overlap 1702329 CGGCAGCGCATTTCG GAGTCCGCG ACGA CGCGG-CTC TTGGTTCAAAAATGT TERM 2480 1702389 - 1702369 - g 77 -10.4 -3.43689 | overlap 1702370 AAAATGTGAGGAGAA CGCGCCGA GCGTT TCGGCGCA GGGCGTCTACGGGTC TERM 2481 1702388 - 1702370 - g 76 -11.7 -2.65491 | overlap 1702369 AAATGTGAGGAGAAC GCGCCGA GCGTT TCGGCGC AGGGCGTCTACGGGT TERM 2482 1702771 - 1702783 + G 77 -10.5 -3.4647 | overlap 1702770 TGAAACCGTGATGCT GGGCG GCT CGCCC TATTTGCGTGTTCAA TERM 2483 1702836 - 1702847 + G 78 -5.8 -4.73613 | opp_overlap 1702819 1702835 ACATTAAGAAATTAT TGCC GTTA GGCA TTTTGTTCATGCTCA TERM 2484 1703226 - 1703254 + G 76 -5.1 -4.73864 | overlap 1703222 1703227 GCATTTTAGCCGCGA TTGGCATTGCCGC TGC GCTGCTTTGCCAG TTTTCTGTTAGTTCC Ctha_1452 1702241 - 1703371 + | exporter of the RND superfamily protein-like protein Ctha_1453 1703373 - 1704371 + | exporter of the RND superfamily protein-like protein TERM 2485 1704369 - 1704383 + F 72 -5 -4.77986 | GCTTTTTCGGCACGC TGATGG TCA TCATCA TTTTTGCCTGTTTGG TERM 2486 1704751 - 1704732 - g 86 -4.2 -5.53288 | TTTAACCGAAAAAAA GCTCGTCA AATT TAACGCGC CTGCCGATGTGAAAG Ctha_1454 1704616 - 1705293 + | exporters of the RND superfamily-like protein Ctha_1455 1705438 - 1706691 + | gamma-glutamyl phosphate reductase TERM 2487 1706727 - 1706706 - T 100 -12.3 -5.48054 | opp_overlap 1706702 1706700 1706706 ACGAAAATGAAAAAA CGCTCCGTC AAAA AACGGAGCG TTCCTATTTCTCAAA TERM 2488 1706706 - 1706727 + T 85 -11.6 -3.50335 | opp_overlap 1706706, overlap 1706702 1706700 ACGAAAATGAAAAAA CGCTCCGT CAAAAA ACGGAGCG TTCCTATTTCTCAAA Ctha_1456 1708037 - 1706772 - | metal dependent phosphohydrolase TERM 2489 1707174 - 1707214 + g 95 -2.6 -5.87688 | gap 2, opp_overlap 1707175, overlap 1707175 AATTTCATCGGGAAC ATGAAGCTTGCCGATGTCGT GAA GCAACG-CGGC-AGCTTCAA TTTTTTTTGAGTTCT TERM 2490 1707596 - 1707585 - G 71 -7.2 -4.13945 | ATGTCCAGCGGAAAA CGCG TCTA CGCG ATCGACCAGGTGAAT Ctha_1457 1708635 - 1708324 - | ATP-dependent Clp protease adaptor protein ClpS Ctha_1458 1708938 - 1709168 + | hypothetical protein TERM 2491 1709437 - 1709457 + G 71 -3.4 -4.90525 | gap 1 CTGCGGTTATGGCTG TTTTGCGCT ATCA AG-GCAAAA TTTTATTTGCAATTC TERM 2492 1709511 - 1709499 - g 73 -7.7 -4.07568 | opp_overlap 1709499 1709498 CCTGCGTTGGGAAAA CTGGA TTG TCCAG GTGGTTTTGTCGATC Ctha_1459 1709211 - 1709831 + | NUDIX hydrolase TERM 2493 1709865 - 1709887 + T 91 -9.1 -5.05782 | opp_overlap 1709865 GTTGGTTATAAAAAA GCCCTCTTC ACTGA GAAGCGGGC TTTTTTGGCGTCGAT TERM 2494 1709887 - 1709865 - T 100 -9.1 -5.24129 | opp_overlap 1709865 GTTGGTTATAAAAAA GCCCTCTTC ACTGA GAAGCGGGC TTTTTTGGCGTCGAT Ctha_1460 1710716 - 1709904 - | thioredoxin Ctha_1461 1713364 - 1710788 - | peptidase S45 penicillin amidase TERM 2495 1711005 - 1711025 + g 70 -2.4 -4.94902 | overlap 1711011 CTGGCGCCAACCGCG TGAGCAGC GTTGA GCAGCGCA TTTTTATCGTAGTTC TERM 2496 1711248 - 1711260 + g 84 -7.7 -4.83269 | overlap 1711255 CGCAAAATTTGAATG GCTTC GGC GAAGC TTTTTCGTATGATGT TERM 2497 1712735 - 1712746 + g 73 -4.4 -4.77896 | AACTTGTAAGGCTTT TTGG TATC CCAA TTTTTCCGTTAGTTC TERM 2498 1713914 - 1713904 - g 74 -5.4 -4.59773 | opp_overlap 1713904 TGCGAGGGGCAAAAA CTTC AGT GAAG GTTTGGATTCGCTCA Ctha_1462 1713731 - 1714723 + | hypothetical protein TERM 2499 1714764 - 1714794 + T 90 -6.8 -5.58522 | AGATTGTTCATGTTG CGCCGGAAGTGTGT TAA AAACGCTTTCGCCG TTTTTCTTTTGTGTG Ctha_1463 1715889 - 1714873 - | Tetratricopeptide TPR_2 repeat protein TERM 2500 1715832 - 1715870 + g 100 -10.8 -6.07627 | opp_overlap 1715831 1715830 1715828 AATTCAAGCAATAGT CCTGCCCGGCTTTCAGCG CCG CACCGCATGTCGGGCAGG TTTTTTTTTCAAGGT Ctha_1464 1716226 - 1715924 - | histone family protein DNA-binding protein Ctha_1465 1716711 - 1716337 - | hypothetical protein Ctha_1466 1718637 - 1716715 - | ATP-dependent metalloprotease FtsH TERM 2501 1717824 - 1717811 - G 74 -8.1 -3.90048 | GCTTGCTCAAAAAGA TCGCG AACG CGCGA GGCGCCCACACCCAC Ctha_1467 1719316 - 1718744 - | hypoxanthine phosphoribosyltransferase TERM 2502 1718961 - 1718924 - G 76 -8.5 -4.10161 | gap 1, opp_overlap 1718933, overlap 1718911 GAGCAGCGCGCAAAA GCGAAGGCTTTTTGG-GC TAT GCGCCAAAATGGCTTCAC GAATATAGCTAACGG TERM 2503 1719062 - 1719073 + g 74 -3.6 -5.00138 | CAATAACTGCACTTG GCCG GCGC TGGC TTTTTCCTTTCCATA Ctha_1468 1720137 - 1719769 - | hypothetical protein Ctha_1469 1722076 - 1720250 - | ABC transporter-related protein TERM 2504 1721691 - 1721681 - G 85 -6.8 -5.03314 | CCGATGCGCAAAAAA TGCC ATG GGCA ACCTGACAAGTTGAG TERM 2505 1721796 - 1721786 - G 95 -3.2 -5.88061 | AAAAAATGAAAAAAA CGCT TGC AGCA AAAGTGAAAGAAGAA TERM 2506 1722237 - 1722247 + H 74 -5.4 -4.71828 | overlap 1722229 ATGGAAAGCGTTCGC CAAG CGC CTTG TTTTATTCCTGCCAT TERM 2507 1724077 - 1724090 + G 77 -3.7 -5.18866 | opp_overlap 1724041, overlap 1724078 CGCGATCCAGCGCTC AGCCC CGAT GGGCA TTTTCTTTATTTCGC Ctha_1470 1722367 - 1725810 + | WD40 domain protein beta Propeller TERM 2508 1726002 - 1726032 + F 100 -4.7 -6.11229 | ATTTAAAAGGCAAAA TCAGCAGGTGGCA AAAAG TGTCTCTTGTTGA TTTTTTTATTTTGGT TERM 2509 1726478 - 1726468 - g 76 -8.2 -4.17316 | ACTTCGCTAAAAGAA GCGC TTG GCGC AAAAAGCGGTTCAAC Ctha_1471 1726168 - 1727484 + | spermidine synthase TERM 2510 1727537 - 1727554 + F 100 -9.1 -6.77747 | CAGAAAATGAAATGG CTCCGGC TCAG GTCGGAG TTTTTTTTTTTCTTG Ctha_1472 1727699 - 1728463 + | protein of unknown function DUF124 TERM 2511 1728465 - 1728511 + T 77 -10.3 -3.04902 | gap 1, opp_overlap 1728464 1728465, overlap 1728466 GCGACGAAGATTAAC CGGTTTGTCAGTAGAGACGAGG TCGC CCTTGTCTCTACTG-CAGAAGG CTTTGTGTCATGGCA TERM 2512 1728466 - 1728512 + T 79 -8.9 -4.08706 | gap 1, opp_overlap 1728464 1728465, overlap 1728465 CGACGAAGATTAACC GGTTTGT-CAGTAGAGACGAGG TCGC CCTTGTCTCTACTGCAGAAGGC TTTGTGTCATGGCAG Ctha_1473 1729086 - 1728625 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Ctha_1474 1729922 - 1729125 - | hypothetical protein TERM 2513 1729445 - 1729428 - G 100 -4.1 -5.85011 | overlap 1729431 TAAAAATGAAAAAAA TAAGGCA AGCG TGCCATA GCCAATCAGGAGCAC TERM 2514 1729442 - 1729431 - G 78 -5.8 -4.90519 | overlap 1729428 AAATGAAAAAAATAA GGCA AGCG TGCC ATAGCCAATCAGGAG Ctha_1475 1730825 - 1729938 - | ABC transporter-related protein TERM 2515 1730346 - 1730358 + g 70 -9.1 -3.46824 | overlap 1730351 TTCCTTAATGCCTTC CGGGT CTA ACCCG TTGGTTGGTTCATCC TERM 2516 1730883 - 1730871 - R 70 -7.7 -3.56403 | overlap 1730869 1730867 CAAAAAAACAATATA CGCTT GAC AAGCG CTCAGGTCAATAAAT TERM 2517 1731026 - 1730978 - R 100 -16.2 -5.61881 | opp_overlap 1730980 1730994 TGCGAAAAATAAAAA CAGCCTCATGGAAAAATCGCCA CAAAC TGGAGATTCGTCCATGAAGCTG CTTGCAAGACCTTAA Ctha_1476 1731412 - 1731059 - | hypothetical protein TERM 2518 1731261 - 1731273 + g 71 -3.4 -4.8622 | TCATTGGTAATCGCG CCTT GCCAG AAGG TTTTTCCTTGCGCAA TERM 2519 1731597 - 1731577 - R 100 -3.3 -6.09888 | overlap 1731582 GTGTAATAAAAAAAA CTCAATGAT ACA ATCATAAAG CCATTTTTATACAAG TERM 2520 1731648 - 1731658 + r 75 -8.2 -3.81557 | overlap 1731646 AAAGAAAGTTGCCCG GCGC TCA GCGC TATTTATTTCAAAAA Ctha_1477 1732115 - 1731690 - | hypothetical protein TERM 2521 1732027 - 1732041 + g 82 -7 -4.86001 | TCTTTGACCGCTTCA GCCCAC TTA GAGGGC TTTTTGTCAGATACT TERM 2522 1732213 - 1732223 + r 77 -6.8 -4.56597 | GTTCTTGGACGTTTT TGGC GCA GCCA TTTTTGGCAAACGGA Ctha_1478 1733269 - 1732382 - | Mammalian cell entry related domain protein Ctha_1479 1734241 - 1733324 - | tyrosine recombinase XerD TERM 2523 1734141 - 1734151 + g 71 -6.8 -4.07678 | opp_overlap 1734125, overlap 1734144 1734150 CGCGTTAAGTCATGC GCGT ACG ACGC TTTCGTATTTTCCGA Ctha_1480 1738177 - 1734419 - | hypothetical protein TERM 2524 1734994 - 1734966 - G 78 -6.7 -4.63486 | opp_overlap 1734952, overlap 1734952 1734988 AGCCTGGTAACAAAA CGCAGGCTTCGTT CCA AATAAAGCTTGCG CTCAATGCCAAGCGT TERM 2525 1735485 - 1735495 + g 76 -4 -4.96848 | ACATAGAGCCTGTCC GTTT TGG AAAC TTTTTCTGTGGAAAC Ctha_1481 1739830 - 1738361 - | adenylate/guanylate cyclase with integral membrane sensor TERM 2526 1739376 - 1739387 + g 83 -2.2 -5.71712 | CTTTCCAAAAATTTT TTCG GAGC CGGA TTTTTTTCTATCAAC TERM 2527 1739472 - 1739482 + g 74 -6.8 -4.19817 | opp_overlap 1739471 1739472 CCCAAAAACCAATAG CTGC TTA GCAG TTTTAAATGGCTGCC TERM 2528 1739684 - 1739666 - G 83 -2.5 -5.75342 | gap 1, overlap 1739668 1739671 CGCTTGGAAAAAAAA CA-CAATC AACA GATTGATG ATAAGCTCCGAGACA TERM 2529 1739681 - 1739668 - G 70 -5.3 -4.52949 | overlap 1739666 1739671 CTTGGAAAAAAAACA CAATC AACA GATTG ATGATAAGCTCCGAG TERM 2530 1739893 - 1739878 - H 70 -6.1 -4.24002 | GCTGAAATTTTAAAA CAGCC TTTTCG GGCTG CCTACACAGGATGAA Ctha_1482 1740028 - 1740879 + | transcriptional regulator, ModE family TERM 2531 1740891 - 1740914 + F 90 -11.8 -4.01411 | overlap 1740885 TTAATCGAGTTCACC GAGAGGGCTT TGCA AAGTCCTCTC TTTGGCTTTTTGCTG TERM 2532 1741772 - 1741799 + G 70 -9.2 -3.36327 | opp_overlap 1741771 AAAACGCTAATTCAT CTTCGTGGTGGT ACGC AGCACTACGAAG TTGTGCGTCGCATGA TERM 2533 1741958 - 1741914 - g 73 -10.3 -3.09655 | gap 1, opp_overlap 1741930, overlap 1741917 1741930 1741943 1741944 GTACAGATACAGACA TTAGCGATCGCCAAAAGTTG GAGCAT CAACTTTTG-CAATCGCAAA AAATGGAAGCGCTTG TERM 2534 1741955 - 1741917 - g 76 -12 -2.75311 | gap 1, opp_overlap 1741930, overlap 1741914 1741930 1741943 1741944 CAGATACAGACATTA GCGATCGCCAAAAGTTG GAGCAT CAACTTTTG-CAATCGC AAAAAATGGAAGCGC TERM 2535 1742074 - 1742056 - g 75 -6.6 -4.41616 | opp_overlap 1742056 ACTGCTCGAAATAAA GCTAAGCG ATA CGCCGAGC TTGGTGAAACAAGCC Ctha_1483 1741169 - 1742689 + | multi-sensor signal transduction histidine kinase TERM 2536 1742966 - 1742946 - f 95 -5.5 -5.76949 | opp_overlap 1742946 TACTCCTAAAAAAAA GAAACAG TCTCGCG CTGTTTC TTTTTTTAGTCCTAA TERM 2537 1742946 - 1742966 + F 89 -6.2 -5.55664 | opp_overlap 1742946 TACTCCTAAAAAAAA GAAACAGT CTCGC GCTGTTTC TTTTTTTAGTCCTAA Ctha_1484 1743015 - 1745264 + | TonB-dependent receptor TERM 2538 1745316 - 1745364 + F 100 -10.6 -5.75342 | gap 2, opp_overlap 1745326, overlap 1745319 1745321 TGTTTTGTTTTTTTC CAGGTCAATAGCCGAAGTGTCCAT CAA ATGGATGCTTTGGCTAT-GGC-TG TTTTTTTTAAAAGGA TERM 2539 1745319 - 1745362 + F 100 -13.4 -4.52949 | gap 1, opp_overlap 1745326, overlap 1745316 1745321 TTTGTTTTTTTCCAG GTCAATAGCCGAAGTGTCCAT CAA ATGGATGCTTTGGCTAT-GGC TGTTTTTTTTAAAAG TERM 2540 1745321 - 1745361 + F 100 -14.9 -3.30685 | opp_overlap 1745326, overlap 1745319 1745316 TGTTTTTTTCCAGGT CAATAGCCGAAGTGTCCAT CAA ATGGATGCTTTGGCTATGG CTGTTTTTTTTAAAA TERM 2541 1745517 - 1745532 + F 70 -4.7 -4.67982 | GCAGGCTTTGCGTAG CCCAA CAAAAT TTGGG TTTTCTTACGTAAGA Ctha_1485 1745645 - 1746013 + | chaperonin Cpn10 TERM 2542 1746087 - 1746099 + G 100 -5.5 -5.95166 | CGATCGCTTTTATCC GTAGC CAT GCTGC TTTTTTTTGGTTGCA Ctha_1486 1746060 - 1746737 + | hypothetical protein Ctha_1487 1746889 - 1747857 + | quinolinate synthetase complex, A subunit Ctha_1488 1747866 - 1748249 + | AIG2 family protein TERM 2543 1748369 - 1748392 + G 71 -3.9 -4.8622 | TTTTTTATCATTTTT GCCGAAA CTGGCCTGTT TTTCGGC TTTTTGCTTCCAGGC Ctha_1489 1748276 - 1748935 + | SNARE associated Golgi protein TERM 2544 1749407 - 1749423 + G 75 -6.5 -4.52349 | opp_overlap 1749407, overlap 1749401 TGACGCCAACAGAAA CCCCAAC CGC GTTGTGG TTTATCTTTCTTTCT TERM 2545 1749423 - 1749407 - g 72 -6.5 -4.20368 | opp_overlap 1749407 1749401 TGACGCCAACAGAAA CCCCAAC CGC GTTGTGG TTTATCTTTCTTTCT TERM 2546 1749762 - 1749775 + G 82 -3.1 -5.47218 | GCTTGTCCAGGAAAA TGTGC TTCC GCATA TTTTTTTGAATGAAA Ctha_1490 1748956 - 1749909 + | protein of unknown function DUF368 TERM 2547 1749976 - 1749932 - T 90 -12.4 -3.42481 | gap 1, opp_overlap 1749939 1749944, overlap 1749944 TTCATGAAAATAAAT GGAAATAA-AAAAGCCGGAGC TAAT ACTCCGGCTTTCATTTTTTCC GTGAAACAGGCTTTT TERM 2548 1749939 - 1749968 + T 83 -6.4 -5.08824 | opp_overlap 1749932 1749944, overlap 1749944 AAATAAATGGAAATA AAAAAGCCGGAG CTAATA CTCCGGCTTTCA TTTTTTCCGTGAAAC TERM 2549 1749944 - 1749963 + T 89 -10.7 -4.43669 | opp_overlap 1749932 1749944, overlap 1749939 AATGGAAATAAAAAA GCCGGAG CTAATA CTCCGGC TTTCATTTTTTCCGT TERM 2550 1749963 - 1749944 - T 100 -11.4 -5.67283 | opp_overlap 1749944 1749939, overlap 1749932 AATGGAAATAAAAAA GCCGGAGC TAAT ACTCCGGC TTTCATTTTTTCCGT Ctha_1491 1751050 - 1750004 - | thiamine pyrophosphate protein domain protein TPP-binding TERM 2551 1750357 - 1750324 - G 72 -4.7 -4.56597 | gap 1 TGTTTTCGCCAAAAA TCAACGGTTTATCTTG TTC CAAGATCA-CGGTTGA ATCCGTTTTGGTAGA Ctha_1492 1752936 - 1751053 - | pyruvate flavodoxin/ferredoxin oxidoreductase domain protein TERM 2552 1753074 - 1753119 + r 81 -10.6 -3.53712 | GCAAAATCACCTATC CGCCCTTGTTGCATCAGCC-TC AAAT GACGGCTGA-GAAACAAGGCCG TTGCTTATTCAGGAT Ctha_1493 1753531 - 1753163 - | hypothetical protein Ctha_1494 1754901 - 1753684 - | arsenite-activated ATPase ArsA TERM 2553 1753859 - 1753845 - G 79 -10 -3.67498 | CAATGGTCAAGACAA GCGTAG AGC CTACGC GAGAAAGCTCCAAAT Ctha_1495 1755281 - 1755961 + | exsB protein Ctha_1496 1758190 - 1756118 - | hypothetical protein TERM 2554 1756290 - 1756280 - G 100 -8.2 -5.30686 | AAGATTGAGAAAAAA GCGG CTT CCGC TGCCATAATGCGCAG TERM 2555 1756394 - 1756380 - G 76 -2.1 -5.40072 | TCCGTTTCAAAAAAA GCAAA ACGCG CTTGC AAAGAAAAACGATCG TERM 2556 1758371 - 1758347 - R 100 -10 -5.65927 | opp_overlap 1758347 GATCGAAATAAAAAA GGCAACTCTG TTTAG CGGAGTTGCC TTTTTATGTCATATA TERM 2557 1758347 - 1758371 + r 100 -12.9 -5.02502 | opp_overlap 1758347 GATCGAAATAAAAAA GGCAACTCTGT TTA GCGGAGTTGCC TTTTTATGTCATATA Ctha_1497 1758878 - 1758375 - | HNH endonuclease TERM 2558 1758490 - 1758501 + g 72 -5.8 -4.51301 | overlap 1758474 GGCATGCCAGCTTGT TCGG GCGT CCGA TTTGCTTTTTTGTTG TERM 2559 1759197 - 1759187 - H 72 -5.4 -4.62471 | GCCAATCCTGAAAAA TGAC GAA GTCA ATTGGCGCGCAATAT TERM 2560 1759245 - 1759224 - H 70 -5.1 -4.63928 | gap 1, overlap 1759226 ATATCAGGGCAAAAA GGTGAG-GCG AGT CGCGCTCAGC AACACAACTACCTGT Ctha_1498 1759502 - 1761001 + | Carbamoyl-phosphate synthase L chain ATP-binding TERM 2561 1761066 - 1761043 - f 100 -14 -4.82901 | opp_overlap 1761043 GTGTTGTCATAAAAA GCCTAAGTGA AAAT TCACTTAGGC TTTTTGCTTTTTGGG TERM 2562 1761043 - 1761066 + F 100 -14 -5.18355 | opp_overlap 1761043 GTGTTGTCATAAAAA GCCTAAGTGA AAAT TCACTTAGGC TTTTTGCTTTTTGGG TERM 2563 1761457 - 1761490 + G 73 -7.4 -4.05607 | overlap 1761460 ACGATGCTGTATTTC CAAGCGCGGGCAAG CAAGTT TTTGGCAGCGCTTG TTATTGTTCTGCTCT Ctha_1499 1761187 - 1762365 + | hypothetical protein TERM 2564 1762627 - 1762598 - f 100 -2.2 -6.00814 | overlap 1762599 AACAATTAAAAAAAA CCATTCATAAAG GAATCG CATCATGAATGA TACCGAATTGCTCCG TERM 2565 1763265 - 1763255 - g 72 -5.4 -4.4078 | GCTCGTCAATGAAAA TGCT GCA AGCA AAGGCGTTGGCGATC Ctha_1500 1762620 - 1763642 + | C-20 methyltransferase BchU TERM 2566 1763680 - 1763710 + F 100 -13.4 -5.60993 | CCCATCAATATTTTT GCCGCAATGTTATT TCA AGCAACATTGCGGC TTTTTTTATGGCCAG Ctha_1501 1763686 - 1763889 + | hypothetical protein Ctha_1502 1763971 - 1765170 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2567 1765224 - 1765187 - T 100 -9.3 -5.52909 | gap 1, opp_overlap 1765187 CAAGACGCAAAAAAA GAGCAATTCCGAC-GC GTTCTCT GCTGCCGAAATTGCTC TTTTTAATTCTTATT TERM 2568 1765187 - 1765224 + T 78 -5.6 -5.03201 | gap 1, opp_overlap 1765187 CAAGACGCAAAAAAA GAGCAATTCCGAC-GCG TTCTC TGCTGCCGAAATTGCTC TTTTTAATTCTTATT Ctha_1503 1765544 - 1765263 - | hypothetical protein TERM 2569 1765603 - 1765570 - R 83 -7.3 -5.00616 | opp_overlap 1765571 1765574, overlap 1765571 1765574 TTTTGGTTTAAAAAA TGGACCCGGCAGGCT TTTT AACCTGCCGCGTTCT CCTCTGCAAAAATTT TERM 2570 1765571 - 1765602 + r 78 -10.8 -2.62515 | opp_overlap 1765570 1765571 1765574, overlap 1765574 TTTGGTTTAAAAAAT GGACCCGGCAGGCT TTTT AACCTGCCGCGTTC TCCTCTGCAAAAATT TERM 2571 1765602 - 1765571 - R 83 -10.8 -3.60048 | opp_overlap 1765571 1765574, overlap 1765570 1765574 TTTGGTTTAAAAAAT GGACCCGGCAGGCT TTTT AACCTGCCGCGTTC TCCTCTGCAAAAATT TERM 2572 1765574 - 1765599 + r 74 -8.9 -3.46602 | opp_overlap 1765571 1765570 1765574, overlap 1765571 GGTTTAAAAAATGGA CCCGGCAGGCT TTTT AACCTGCCGCG TTCTCCTCTGCAAAA TERM 2573 1765599 - 1765574 - R 79 -11.1 -2.92111 | opp_overlap 1765574 1765571, overlap 1765571 1765570 GGTTTAAAAAATGGA CCCGGCAGGCT TTTT AACCTGCCGCG TTCTCCTCTGCAAAA Ctha_1504 1766801 - 1765587 - | acetylornithine and succinylornithine aminotransferase TERM 2574 1766956 - 1766937 - R 75 -6.4 -4.49352 | AGATGAAAATAGAAA GGCGTG CTTTTTTT CACGCC CTAACAATTCAACGT Ctha_1505 1768841 - 1766973 - | MscS Mechanosensitive ion channel Ctha_1506 1769638 - 1768910 - | DNA alkylation repair enzyme TERM 2575 1769248 - 1769218 - G 80 -6.9 -4.62069 | opp_overlap 1769212, overlap 1769191 CGGCGAGCCGAAAAA GCGTGTCTTTTTC TTGAT GGAAAAGAAACGC GCCCACAATCTGCTC TERM 2576 1769548 - 1769560 + g 76 -4.1 -4.98758 | TTTTAAAAAAGCGCT GCAAG ATT TTTGC TTTTTCTGGATTTTT Ctha_1507 1770584 - 1769664 - | cysteine synthase A TERM 2577 1771753 - 1771739 - g 72 -9.2 -3.64822 | overlap 1771740 ATTTGGGGATTGAAA CGGGCG TGG CGCCCA CAACGCTCAAAACGA TERM 2578 1771752 - 1771740 - g 72 -10.5 -2.78679 | overlap 1771739 TTTGGGGATTGAAAC GGGCG TGG CGCCC ACAACGCTCAAAACG TERM 2579 1771988 - 1772005 + G 89 -4.1 -5.76949 | TGCTTTTTTGTTCAA CGAACTT GAAA AAGATCG TTTTTTTTACGACTG Ctha_1508 1770874 - 1773114 + | FG-GAP repeat protein Ctha_1509 1773143 - 1773751 + | peptide deformylase TERM 2580 1773779 - 1773817 + G 72 -8.9 -3.57441 | gap 1 TGTTTTTATGGGAAC GCCGCATTTTTCTG-TGC CATC GCTTCGGAAAATTGCGGC TTCTGATTCTGGATT TERM 2581 1773857 - 1773842 - g 70 -9 -3.3382 | TGGATTACAGATTAA GCTGGT TGTG ACCAGC CCGGAAAAGCCTCGT Ctha_1510 1773771 - 1774694 + | methionyl-tRNA formyltransferase Ctha_1511 1774813 - 1775448 + | hypothetical protein Ctha_1512 1775611 - 1775820 + | hypothetical protein Ctha_1513 1775929 - 1776486 + | hypothetical protein Ctha_1514 1776473 - 1777063 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Ctha_1515 1778682 - 1777192 - | hypothetical protein TERM 2582 1777543 - 1777557 + g 72 -5.7 -4.4767 | opp_overlap 1777542 1777543 TGGAAAAACATGAAC GATGG TTTCC CCATC TTTTGTCGTCAGTGA TERM 2583 1779268 - 1779245 - H 83 -11 -3.66772 | opp_overlap 1779245 CTAAAGCGTGAAGAA GCCCTGTTCA GGAA TGGACAGGGC TTTTTTAACTTAAAG TERM 2584 1779245 - 1779268 + H 100 -13.2 -5.15969 | opp_overlap 1779245 CTAAAGCGTGAAGAA GCCCTGTTCA GGAA TGGACAGGGC TTTTTTAACTTAAAG Ctha_1516 1779294 - 1781717 + | phenylalanyl-tRNA synthetase, beta subunit Ctha_1517 1781786 - 1782169 + | developmental myosin heavy chain neonatal-like protein Ctha_1518 1782214 - 1782486 + | hypothetical protein TERM 2585 1783361 - 1783351 - g 80 -6.8 -4.63932 | CATTGCCGAACAAAA CCAG CGT CTGG TTAGCATCAGCGGTT Ctha_1519 1782917 - 1784491 + | RNA binding metal dependent phosphohydrolase TERM 2586 1784543 - 1784560 + T 93 -10.5 -5.14563 | opp_overlap 1784543 1784542 AATAAAGTTGAAAAG GGCGGCC AATG GGTCGCC TTTTTTGATCAAAAA TERM 2587 1784578 - 1784601 + T 100 -11.8 -5.13521 | opp_overlap 1784578 TTTTGATCAAAAAAA CGAGGGTTAT TTTC ATAGCCCTCG TTTTTTGCCTCATTT TERM 2588 1784601 - 1784578 - T 100 -9.6 -5.52384 | opp_overlap 1784578 TTTTGATCAAAAAAA CGAGGGTTAT TTTC ATAGCCCTCG TTTTTTGCCTCATTT Ctha_1520 1785935 - 1784634 - | Adenylosuccinate synthase Ctha_1521 1786535 - 1785954 - | GTP-binding protein HSR1-related TERM 2589 1786253 - 1786278 + g 71 -9.7 -3.1634 | AGTAGCCTTCCATCA GTTGCTGCCAG TTTT CTTGCAGCGAC TTCGATACTTTCGCA TERM 2590 1786375 - 1786394 + g 74 -3.4 -5.03314 | overlap 1786366 1786377 1786378 GTTTTTCCCGGCGTC GCGCTGGC TCTT GCCAGGTC TTTTTTGCCCATCAA TERM 2591 1787042 - 1787019 - g 77 -11 -3.14211 | gap 1 ACGGCGTGTGAGCAA GCACGCGTGCA ACT TGC-CGCGCGC ATTGAAGCACTTGAA Ctha_1522 1786575 - 1787222 + | protein of unknown function DUF309 TERM 2592 1787545 - 1787581 + G 77 -3.7 -5.20216 | overlap 1787550 1787550 1787552 AGGTCGATATTGTTT CAACGCCGCGCAAATAT TTC ATGTTTGTGCTGGTTTG TTTTTTGGTGCTGTA TERM 2593 1787550 - 1787577 + G 83 -6.4 -5.0917 | gap 1, overlap 1787545 1787550 1787552 GATATTGTTTCAACG CC-GCGCAAATAT TTC ATGTTTGTGCTGG TTTGTTTTTTGGTGC Ctha_1523 1787367 - 1787813 + | Septum formation initiator TERM 2594 1789245 - 1789229 - g 88 -3.6 -5.75538 | TTTAAAAAAGAAAAA GCGACC GTGCA AGCCGC CGCCGAAGTGCTTGC TERM 2595 1789573 - 1789585 + G 71 -3.4 -4.73677 | CGCGCGAATTCGTGT TTCC AAAAC GGAA TTTATTTCTTGTCCG Ctha_1524 1787831 - 1789894 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 2596 1789967 - 1789952 - T 93 -10.4 -5.14563 | opp_overlap 1789952 TGCGCCATTAAAAAA CCGGCT TTGA AGCCGG TTTTTTTTTCGATCA TERM 2597 1789952 - 1789967 + T 100 -10.4 -6.11644 | opp_overlap 1789952 TGCGCCATTAAAAAA CCGGCT TTGA AGCCGG TTTTTTTTTCGATCA TERM 2598 1790046 - 1790062 + T 72 -8 -3.74347 | GTGCAATTCAAATGG CCGCTT TGCTT AAGCGG TTTCCCATTTCTGCA Ctha_1525 1790834 - 1790055 - | phospholipid/glycerol acyltransferase TERM 2599 1790362 - 1790339 - G 72 -4.8 -4.72272 | gap 1 TGGTTTGAGGAAAAA TCAAAATAGAA ATA TTCT-TTTTGA GACGCGCTTCCGCGC TERM 2600 1791016 - 1791039 + r 73 -3 -5.24129 | opp_overlap 1791016 AAGAAAATAAAAAAA GCCGTACCGT TTGC GCAGTACAGC TTTTTTATGGCCGAA TERM 2601 1791039 - 1791016 - R 100 -6.7 -6.17669 | opp_overlap 1791016 AAGAAAATAAAAAAA GCCGTACCG TTTGCG CAGTACAGC TTTTTTATGGCCGAA Ctha_1526 1791709 - 1791068 - | YceI family protein TERM 2602 1792154 - 1792121 - R 85 -6.9 -5.02074 | opp_overlap 1792121 1792126, overlap 1792126 CTATTTCTTAAAAAA GAAAAGTCAGTGA TTTGCGTC TCACTGACTTTTG GTTGGTCTGATGAAC TERM 2603 1792126 - 1792149 + r 75 -6.8 -4.4773 | opp_overlap 1792126 1792121, overlap 1792121 TCTTAAAAAAGAAAA GTCAGTGA TTTGCGTC TCACTGAC TTTTGGTTGGTCTGA TERM 2604 1792149 - 1792126 - R 89 -6.8 -5.42198 | opp_overlap 1792121 1792126, overlap 1792121 TCTTAAAAAAGAAAA GTCAGTGA TTTGCGTC TCACTGAC TTTTGGTTGGTCTGA Ctha_1527 1792856 - 1792200 - | Nucleoside-triphosphate--adenylate kinase Ctha_1528 1793480 - 1792863 - | hypothetical protein Ctha_1529 1794605 - 1793496 - | radical SAM enzyme, Cfr family TERM 2605 1794120 - 1794108 - G 71 -7.7 -3.87815 | opp_overlap 1794107 1794108 GCCCATTCCCATAAA CACGA CAT TCGTG ATTTTCCCGCCACGT TERM 2606 1794679 - 1794698 + H 86 -10.8 -3.91897 | opp_overlap 1794679 TGAGGCAAAAAAAAA GCCTGTTT TAAA AAACAGGC TTTATCGCTGGGGCG TERM 2607 1794698 - 1794679 - H 100 -10.8 -6.11644 | opp_overlap 1794679 TGAGGCAAAAAAAAA GCCTGTTT TAAA AAACAGGC TTTATCGCTGGGGCG TERM 2608 1795073 - 1795086 + G 76 -5.2 -4.82901 | GCTCCCTTCAAATGT CGCC TCGGTT GGCG TTTTTGTCGGAAAAG Ctha_1530 1794912 - 1795571 + | Phosphoribosylanthranilate isomerase TERM 2609 1795898 - 1795910 + G 70 -4.8 -4.44667 | opp_overlap 1795898, overlap 1795897 TATGCGGTTGAAAAT GCTG ATAGG CAGC TTTCTTATTGGGCGG TERM 2610 1797295 - 1797276 - g 75 -6.4 -4.42653 | opp_overlap 1797275 1797276 1797287 1797288 AGGCTATTTATAAAA GTGGCTCA AAGT TGAGCGAC CTTGTCGATCGGTTT TERM 2611 1797529 - 1797508 - g 77 -7.3 -4.4017 | overlap 1797521 GGAAGCCTTACAAAA CCTGATGAC AAAT GCCATCAAG TACGGCGGAAAAAAT Ctha_1531 1795724 - 1797829 + | integral membrane sensor signal transduction histidine kinase TERM 2612 1798447 - 1798462 + G 74 -5.4 -4.71426 | gap 1, opp_overlap 1798447 1798439 1798435, overlap 1798442 1798449 AAACCTACGACAATA GCTCAGC AAC GCTG-GC TTTTGTTGATGGCAG TERM 2613 1798866 - 1798876 + G 72 -5.4 -4.46926 | TTGGACACGGTGTAT TTCG GAT CGAA TTTTCTGATAGAATG Ctha_1532 1797846 - 1799639 + | hypothetical protein TERM 2614 1799814 - 1799802 - g 80 -6.9 -4.61231 | opp_overlap 1799801 1799811 1799812 TTAGACCGTCAAAAA GCGCC GGA AGCGC CATTTTGCGCGTTTT TERM 2615 1803657 - 1803673 + G 82 -7.9 -4.64861 | opp_overlap 1803657 CTATTTTCGTGAATA CGTCGCC GAA GCCGACG TTTGTTTTGCCGGAA TERM 2616 1803904 - 1803927 + G 72 -6.6 -4.25283 | AGAAATTCATGTCAT TCCGTCGCCG GAAT TGGAGGCGGA TTTTCCTGAACACAT Ctha_1533 1799636 - 1804396 + | PKD domain containing protein TERM 2617 1804409 - 1804422 + F 73 -3.8 -5.08088 | overlap 1804418 TAATGAACATTGGAT GAGC AGCCGC GCTC TTTTTCTTGAGCGTT TERM 2618 1805631 - 1805620 - g 77 -7.2 -4.43307 | CGCCTAACAAAAGAA GCGC TTCA GCGC ATTACCGCGCAACAA Ctha_1534 1804585 - 1805931 + | Fmu (Sun) domain protein TERM 2619 1806001 - 1805980 - T 100 -11.6 -5.66229 | opp_overlap 1805980 ACGAACAATAAAAAA GGGCGAAC TCCTGC GTTCGCCC TTACATAAAATTAAA TERM 2620 1805980 - 1806001 + T 83 -11.6 -3.07994 | opp_overlap 1805980 ACGAACAATAAAAAA GGGCGAAC TCCTGC GTTCGCCC TTACATAAAATTAAA Ctha_1535 1807529 - 1806024 - | lipoprotein TERM 2621 1807436 - 1807460 + g 70 -10.2 -2.50935 | opp_overlap 1807434 1807435 1807442, overlap 1807435 1807442 TTAACCAAAGCAATC CTAAAAGGAA AACGA TTCCTTTTAG CTTGGTGGGTAAAGT TERM 2622 1807533 - 1807513 - G 74 -3.4 -5.00616 | gap 1, overlap 1807517 TTTTTGCTTAAAAAA GATACATGA AATG TCATGT-TC GAAGAGAACCTTGGA TERM 2623 1807699 - 1807723 + r 81 -11.5 -2.72799 | opp_overlap 1807699, overlap 1807701 1807703 CTATGTGCTTTAAAA TAGAGGCGC TTTCCGT GCGCCTCTA TCGTGTATGTGCAAA TERM 2624 1807723 - 1807699 - R 90 -11.5 -4.08216 | opp_overlap 1807699 1807701 1807703 CTATGTGCTTTAAAA TAGAGGCGC TTTCCGT GCGCCTCTA TCGTGTATGTGCAAA TERM 2625 1807701 - 1807721 + r 75 -9.7 -2.90797 | opp_overlap 1807699, overlap 1807699 1807703 ATGTGCTTTAAAATA GAGGCGC TTTCCGT GCGCCTC TATCGTGTATGTGCA Ctha_1536 1809128 - 1807758 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2626 1808012 - 1808032 + g 72 -6.1 -4.2243 | TCAGCTTCACAAATT GCTTGCTGA CAT TTGGCAGGC TTTTCGGATGTTTAT TERM 2627 1809376 - 1809392 + r 73 -9.5 -3.03124 | TTGGCCGTTTATCCT TTTTCCG CAC CGGAAAA TATTACCGGCTCAGG Ctha_1537 1811290 - 1809437 - | ABC transporter-related protein TERM 2628 1810521 - 1810545 + g 72 -8.5 -3.81473 | opp_overlap 1810514 TGAATCGATCGGATA TTGGCATCGCG ATG CGCGGCGCTAA TTTCAGTGTGTTTTT Ctha_1538 1811590 - 1811297 - | Ethanolamine utilization protein EutN/carboxysome structural protein Ccml TERM 2629 1811778 - 1811799 + r 80 -3 -5.52384 | CATTGCGGATAGAAA TAGCTGCA AAATCG TGTGGCTA TTTTTTTGGTAAGGA Ctha_1539 1814031 - 1811971 - | GLUG domain protein TERM 2630 1814255 - 1814233 - R 89 -10.6 -4.54727 | GTTTTGAAATGAAAA GGGCGAAC ACTTATG GTTCGCCC CTACGCAATCAAATT Ctha_1540 1816709 - 1814277 - | hypothetical protein TERM 2631 1815348 - 1815365 + g 70 -9.1 -3.43338 | GTTTGTAAAGTCCCA GTCGGCA TAAG TGCCGGC TTGCTTCATCTCGCT TERM 2632 1816487 - 1816473 - G 71 -7 -4.07568 | overlap 1816452 1816474 GCCGCTGTTGTAAAA GTCGCC GCC GGCGGC AAAGTCATCCGCCGT Ctha_1541 1817859 - 1816855 - | ribosome small subunit-dependent GTPase A TERM 2633 1817005 - 1816993 - G 72 -6.2 -4.30576 | CGTGCAGGAGGAAAA GCCG CAGTC CGGC GCGAAGTTTTGAAAT Ctha_1542 1820007 - 1817872 - | ATP-dependent DNA helicase RecG TERM 2634 1818208 - 1818196 - G 80 -6.3 -4.87807 | GGAATAGACCAAAAA GCAAT ACG ATTGC GCCTCGCCGCGCCCG TERM 2635 1818538 - 1818548 + g 85 -6.8 -4.92314 | GGCCTGCCGACCTTT GCGA ATC TCGC TTTTTATAAATTCAT TERM 2636 1818896 - 1818923 + g 87 -10.6 -4.07568 | overlap 1818891 1818889 TCCGTTCTGAGCGCC TTGCGCTGTTTG CCGA CGAGCAGCGCGA TTTTAACGCCGAGCG TERM 2637 1819473 - 1819445 - G 72 -8.1 -3.767 | overlap 1819455 GATTTATCGAGCAAA TTGCGCACAATGC GCC GCATGATGCGCGA ATTCAGGCCGCCGCG Ctha_1543 1820094 - 1820354 + | ribosomal protein L31 TERM 2638 1820390 - 1820426 + F 100 -6.7 -5.88476 | gap 1, opp_overlap 1820401 CTCCAAATTTTTTAT GCTCAAATGCACGGCT TTTAGC GGCC-TACATTTGAGC TTTTTTATTTATTTT TERM 2639 1820687 - 1820701 + F 70 -8.6 -3.08133 | opp_overlap 1820686 1820682, overlap 1820699 ATTAATTTAATTCAT GTGCTT TTT AAGCAC TTAAGTAAATAAGTG TERM 2640 1821289 - 1821272 - g 75 -6.3 -4.53036 | gap 1 GCACAAATACGAAAA GTC-GCTC GAC GAGCTGAC ATCCAAAAAGGAAAA Ctha_1544 1820760 - 1821323 + | ribosome recycling factor TERM 2641 1821382 - 1821419 + F 79 -6.4 -4.7078 | gap 1, opp_overlap 1821379 1821381 1821382 1821384, overlap 1821379 CACAATACACAAGAG CACCGCGCTCATC TCAACAACTCTCT GATG-GCGCGGTG TTTTTAGATAATTAA TERM 2642 1821463 - 1821452 - f 72 -5.8 -4.46514 | opp_overlap 1821452 AGCCATTCAAATAAA CAGC ATGA GCTG TTATTCCTATAACTT TERM 2643 1823157 - 1823169 + G 76 -4.8 -4.8622 | TTGGTTTGCGGGACA TCGC GAAGA GCGA TTTTTAATTCACGCG TERM 2644 1824820 - 1824794 - g 91 -7.4 -5.11937 | opp_overlap 1824794 1824818 AAGAAGTTGAAAAAA TCCTTTTTGAGA CGT TCCCAAAAACGA TTGATGTCGATATTC Ctha_1545 1821673 - 1825674 + | PAS/PAC sensor hybrid histidine kinase TERM 2645 1825808 - 1825822 + F 71 -3.6 -4.87665 | TTAGTTTTTTTATAT TGAAGA CTA TTTTCA TTTTTCTAACTCGAA TERM 2646 1826217 - 1826205 - g 78 -6.3 -4.58395 | opp_overlap 1826205 GCGATGCTGGAAAAA TCATC ATC GATGA TATTGAAAAGCTGCT Ctha_1546 1825871 - 1827175 + | adenylosuccinate lyase TERM 2647 1827232 - 1827215 - T 88 -9.1 -4.79756 | opp_overlap 1827215 CACATAACGCAAAAA CTCCGGC GGGC ACCGGAG TTTTTTATTGAAAAT TERM 2648 1827215 - 1827232 + T 100 -8.4 -5.45652 | opp_overlap 1827215 CACATAACGCAAAAA CTCCGG CGGGCA CCGGAG TTTTTTATTGAAAAT Ctha_1547 1827703 - 1827272 - | hypothetical protein TERM 2649 1827769 - 1827788 + r 83 -7.9 -4.60041 | opp_overlap 1827769, overlap 1827749 1827748 TTTGTAACGCAAAAA GGGGTTT CCGAAA AAACCCC TTTTTGAAAATCAAT TERM 2650 1827788 - 1827769 - R 88 -8.6 -4.74103 | opp_overlap 1827749 1827748 1827769 TTTGTAACGCAAAAA GGGGTTTC CGAA AAAACCCC TTTTTGAAAATCAAT Ctha_1548 1829394 - 1827817 - | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Ctha_1549 1829459 - 1830088 + | phosphoribosylglycinamide formyltransferase TERM 2651 1830147 - 1830122 - f 84 -9 -4.43877 | opp_overlap 1830122, overlap 1830124 CAATTTTGAAATAAA CGCGTGTAGC CGAGAT GCTACACGTG TTTTTTTATTTTTGA TERM 2652 1830122 - 1830147 + F 100 -11.2 -6.20267 | opp_overlap 1830122 1830124 CAATTTTGAAATAAA CGCGTGTAGC CGAGAT GCTACACGTG TTTTTTTATTTTTGA TERM 2653 1830145 - 1830124 - f 73 -10.2 -2.54639 | opp_overlap 1830122, overlap 1830122 ATTTTGAAATAAACG CGTGTAGC CGAGAT GCTACACG TGTTTTTTTATTTTT TERM 2654 1830491 - 1830502 + G 71 -7.2 -4.07885 | TGGTAGAAATTACGG GCGG CGAA CCGC TTTTGCAGCCAAATG TERM 2655 1830786 - 1830811 + G 70 -2.5 -5.01732 | gap 1, overlap 1830781 1830787 1830790 TTTGATCGAACGCTA CGACCTGGCGCG TTT TGTGCCAG-TCA TTTTTTCAGCGGCTT TERM 2656 1830790 - 1830808 + G 70 -8.8 -3.37655 | overlap 1830781 1830787 1830786 ATCGAACGCTACGAC CTGGCGCG TTT TGTGCCAG TCATTTTTTCAGCGG Ctha_1550 1830283 - 1830942 + | Radical SAM domain protein Ctha_1551 1832676 - 1830976 - | type I phosphodiesterase/nucleotide pyrophosphatase TERM 2657 1831745 - 1831757 + g 72 -4.9 -4.68655 | TCTTGGCCAAGCGCT TCATT TTC AATGA TTTCTTTTGCGATTG Ctha_1552 1834688 - 1832754 - | DNA gyrase, B subunit TERM 2658 1833922 - 1833950 + g 71 -6.8 -4.03174 | gap 1 ATTTCTACCACGGTC CCG-TCTTTTTCG CCTT CGAAATAGATCGG TTCTTTAATCAATTT TERM 2659 1834105 - 1834131 + g 72 -5 -4.60889 | overlap 1834099 1834106 TCGCGCATCCGGTCG GCGAGCGTGTCG TAG CGAAACTCTCGG TTTTTGAAGATGCTT Ctha_1553 1835001 - 1836011 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 2660 1836198 - 1836234 + G 79 -7.4 -4.42748 | gap 1, overlap 1836201 AATTGCTTGAGACGC TTGGTGTGATGCTGCCA GTAG TGGCAGCA-CATGCTGA TTATTTTTCACCTGC Ctha_1554 1836011 - 1836451 + | thioesterase superfamily protein TERM 2661 1836524 - 1836487 - T 95 -12.1 -4.28361 | opp_overlap 1836476 1836487 GGAAGTTTAGCAAAA TGCACATGGCCTGCC GCCAAAAT GGCAAGTCATGTGCA TTCCGTAGCCTGTTT TERM 2662 1836487 - 1836524 + T 91 -12.8 -3.08187 | opp_overlap 1836487, overlap 1836476 GGAAGTTTAGCAAAA TGCACATGGCCTGCCG CCAAAA TGGCAAGTCATGTGCA TTCCGTAGCCTGTTT Ctha_1555 1836757 - 1836539 - | protein of unknown function DUF1458 Ctha_1556 1837873 - 1836818 - | TrkA-N domain protein TERM 2663 1838022 - 1838008 - H 72 -7.2 -3.93673 | CAAAGACCTCACAAA GAAAAG AAC CTTTTC CCATTTATCTAAATA Ctha_1557 1838057 - 1838431 + | hypothetical protein Ctha_1558 1839006 - 1838506 - | Late embryogenesis abundant protein 2 Ctha_1559 1839564 - 1839025 - | isochorismatase hydrolase Ctha_1560 1839927 - 1840169 + | acyl carrier protein TERM 2664 1840262 - 1840308 + F 79 -10.3 -3.24597 | opp_overlap 1840262, overlap 1840260 TTATTTTCTATAAGA GACCCAATTTTGTTTGCTG AAAAAAGAA CAGCGTACAAGGTTGGGTC TATTGATTAAAAATT Ctha_1561 1840327 - 1841571 + | 3-oxoacyl-(acyl-carrier-protein) synthase 2 TERM 2665 1841578 - 1841615 + F 89 -10.7 -4.62783 | opp_overlap 1841588, overlap 1841580 AAAATATAGTTGAGT TTTTGAGCAAGGCGAAA TTTG TTTCGCTTTGCTCAATC TTTTTAAAATAGGTC TERM 2666 1841580 - 1841613 + F 100 -17.7 -3.92746 | opp_overlap 1841588, overlap 1841578 AATATAGTTGAGTTT TTGAGCAAGGCGAAA TTTG TTTCGCTTTGCTCAA TCTTTTTAAAATAGG TERM 2667 1842467 - 1842455 - g 87 -6.9 -5.14563 | overlap 1842457 GGGCGCAGTAAAAAA GCCGC CGA GCAGC TCGCCGCTCAACAAG Ctha_1562 1841702 - 1842511 + | Ribonuclease III Ctha_1563 1842692 - 1844173 + | Glycine dehydrogenase (decarboxylating) TERM 2668 1845384 - 1845371 - g 78 -6.7 -4.66537 | TTTTTCAACATAAAA TCCTC ACAA GAGGA GGAATGGGGCTATCA TERM 2669 1845464 - 1845478 + G 75 -10 -3.62275 | TCCGACACGTTCGAC GCGCAT CAA ATGCGC TTTGAAGTGGTGGAT Ctha_1564 1844177 - 1845559 + | protein of unknown function DUF21 Ctha_1565 1845698 - 1846723 + | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 2670 1847329 - 1847358 + G 85 -7.2 -4.91459 | gap 1 GCCTTCCGCTTTTGA TC-TCGAACAGCG AAATG CGCTGCTCGACGA TTTTTATGAATCTTA TERM 2671 1847423 - 1847443 + G 70 -5.3 -4.44046 | opp_overlap 1847422, overlap 1847406 1847419 CGTGCGGCATACGAG CGCGTTATC AAC GACATCGCG TTTGTTTCGGATAAA Ctha_1566 1846736 - 1848553 + | signal peptide peptidase SppA, 67K type Ctha_1567 1849668 - 1848715 - | hypothetical protein TERM 2672 1849334 - 1849360 + g 95 -3.1 -5.87996 | gap 1, overlap 1849335 CATTTTCGATATTCA GGATTTT-CCAG AATG CTGGCAAAATCG TTTTTTTCTTCGTTG TERM 2673 1852250 - 1852235 - g 74 -5.4 -4.56597 | gap 1 TTCGGCGCGGAAAAA TGCGAGC AAG GC-CGCA ACTTCGCCACGAAGA TERM 2674 1852272 - 1852282 + G 76 -2.4 -5.38958 | CCACGAAGATTTGGA ACGC CAC GCGA TTTTTATTTATGAAT TERM 2675 1852551 - 1852541 - g 84 -8.2 -4.56597 | GTTCGCCTGCAAAAA GCCG AGA CGGC GGCGCAAAAACAAGC Ctha_1568 1850492 - 1853206 + | valyl-tRNA synthetase TERM 2676 1853226 - 1853244 + T 100 -13.1 -6.07969 | opp_overlap 1853226 CAATCAAACGACAAA GCCCGCG ATTGA CGCGGGC TTTTTTTTGGTTTTC TERM 2677 1853244 - 1853226 - T 100 -13.1 -4.17448 | opp_overlap 1853226 CAATCAAACGACAAA GCCCGCG ATTGA CGCGGGC TTTTTTTTGGTTTTC Ctha_1569 1853763 - 1853266 - | PIN domain protein Ctha_1570 1854901 - 1853768 - | protein of unknown function DUF955 TERM 2678 1853907 - 1853931 + g 82 -2.8 -5.54894 | gap 1, overlap 1853928 CTAATTCGTTTTCTC GCGGTCGC-AT AATA ATCGCCGCCGC TTTTTTTAGTGGATT TERM 2679 1854134 - 1854154 + g 78 -5.3 -4.98522 | overlap 1854136 CGGGACTAAGACTTC CGCTGCGAC TTG GTCGCAAAG TTTTTCTATGGCGTT TERM 2680 1855175 - 1855191 + G 85 -3.7 -5.53436 | GGATTAAGTCGTTTT TTCTTGT GAT GCAGGAA TTTTTTCTCTTCTCT Ctha_1571 1855117 - 1855914 + | protein of unknown function DUF140 TERM 2681 1856282 - 1856268 - g 76 -2 -5.40004 | overlap 1856269 1856270 GATGAAATCAAAAAA CGGGTC GAA GACCAA ATTAAATTTGCAGGA TERM 2682 1856372 - 1856353 - g 85 -3.4 -5.52384 | opp_overlap 1856353 1856353, overlap 1856354 GCGGCATGAAAAAAA GGGTCGCC ATTG GGCGAGCG CTGATTTTTCATCCG Ctha_1572 1855920 - 1856654 + | ABC transporter-related protein Ctha_1573 1856716 - 1857654 + | Mammalian cell entry related domain protein Ctha_1574 1857719 - 1858246 + | adenylate cyclase Ctha_1575 1858294 - 1859097 + | DNA methylase N-4/N-6 domain protein Ctha_1577 1860017 - 1861219 + | beta-lactamase TERM 2683 1861702 - 1861692 - g 78 -5.4 -4.78107 | CACTATTATGAAAAA GCTT GTC AAGC GGCGCCGCAAAATGA TERM 2684 1861894 - 1861871 - g 71 -9.6 -3.19602 | overlap 1861869 GCCTTCACACGAAGA TGACTTCGCG GCTG CGCCAAGTCA AGCGCAAGCATTGCC TERM 2685 1862641 - 1862626 - g 74 -6.8 -4.33153 | gap 1, opp_overlap 1862625 CGGAAGATCAAGAAA GCCG-CG ATG CGTCGGC GTTAGATGTTTCGGA Ctha_1578 1861437 - 1863560 + | Tetratricopeptide TPR_2 repeat protein TERM 2686 1863648 - 1863687 + T 85 -7.1 -5.09225 | opp_overlap 1863634 1863648, overlap 1863631 1863629 ACCTTTTATGAAAAA GGCTGTGCTTGACTGGC TTCAAC GCAAATCAAGTTCAGCC TTTTTTCAATCGACT TERM 2687 1863687 - 1863648 - T 81 -7.1 -4.7254 | opp_overlap 1863631 1863629 1863648, overlap 1863634 ACCTTTTATGAAAAA GGCTGTGCTTGACTGGC TTCAAC GCAAATCAAGTTCAGCC TTTTTTCAATCGACT Ctha_1579 1864715 - 1863714 - | Ribosomal small subunit Rsm22 TERM 2688 1863802 - 1863812 + g 72 -3.2 -5.08824 | CAGCGCTGCATTGTC GGGA ATT TTCC TTTTTTGAATGCCCG TERM 2689 1864486 - 1864473 - G 76 -8.1 -4.1673 | GAAGTGTTGAAGAAA TCGCC GCGT GGCGA TGCCGCTGCCACAGC TERM 2690 1864748 - 1864766 + r 70 -9 -3.16881 | opp_overlap 1864745 1864752, overlap 1864752 GTTAAAAATTTATGA GCAATAAA AAC TTTATTGC TTGATCAAATCGGTG Ctha_1580 1865743 - 1864760 - | ATPase associated with various cellular activities AAA_3 TERM 2691 1864977 - 1864988 + g 73 -4.4 -4.82667 | CATCCCACAAATTGC CGAA CGAG TTCG TTTTTGGTCTGATGC TERM 2692 1865100 - 1865110 + g 76 -2.4 -5.44119 | overlap 1865098 GCTAAAATCTTCTCG GCGC TTA GCAC TTTTTTTAGCGTCGG TERM 2693 1865809 - 1865794 - R 70 -7.6 -3.6806 | opp_overlap 1865794 1865806, overlap 1865806 AGATATTTATTGAAA CGCATT AAAA AATGCG TTATAGCTAAGCGCA TERM 2694 1865824 - 1865806 - R 73 -2.5 -5.19261 | gap 1, opp_overlap 1865794 1865806, overlap 1865794 1865820 AAACGCATTAAAAAA TGCG-TTA TAGC TAAGCGCA TCATTATTTAAAGCG Ctha_1581 1867462 - 1866086 - | peptidase M16 domain protein TERM 2695 1866407 - 1866417 + g 80 -5.4 -5.03314 | GGCTTCCGTGACTTT TTCG CTG CGAA TTTTTTCCAGCTCCG TERM 2696 1867665 - 1867648 - R 100 -11.3 -6.09196 | opp_overlap 1867648 CCGAAAACAAAAAAA GCCGCTT TTTA AAGCGGC TTATCAATTTTTCTG TERM 2697 1867648 - 1867665 + r 83 -11.3 -3.57767 | opp_overlap 1867648 CCGAAAACAAAAAAA GCCGCTT TTTA AAGCGGC TTATCAATTTTTCTG Ctha_1582 1873006 - 1868255 - | hypothetical protein TERM 2698 1870097 - 1870082 - G 72 -10.4 -2.90496 | opp_overlap 1870081, overlap 1870079 1870080 GGTTGTGGTAAAGGA CGGCGA ATCG TCGCCG GTTGGCTCGGCGGTC TERM 2699 1872991 - 1873005 + g 77 -3.6 -5.1356 | CAAAAAGAAATAGTT TGAAGA AGT TTTTCA TTTTTGTTAATAAAA Ctha_1583 1873576 - 1874151 + | NADPH-dependent FMN reductase Ctha_1584 1874148 - 1874840 + | NADPH-dependent FMN reductase TERM 2700 1874917 - 1874868 - T 76 -10.3 -2.79501 | opp_overlap 1874868, overlap 1874874 CATATTGCCACGATA GGAAAAGATGATGCCATGC AAAAGTCGAGCG ATATGGCATCATCTTTTCC TTTTTTCATTCGTGG TERM 2701 1874868 - 1874917 + T 100 -11.1 -5.30155 | gap 1, opp_overlap 1874868 1874874 CATATTGCCACGATA GGAAAAGATGATGCCATG-C AAAAGTCGAGC GATATGGCATCATCTTTTCC TTTTTTCATTCGTGG Ctha_1585 1875668 - 1874955 - | response regulator receiver protein TERM 2702 1875005 - 1875018 + g 72 -6.7 -4.28323 | overlap 1874995 TGTTGCCGTAAGATT TGACC TTAT GGTCA TTTCTGTTGCTTAAT TERM 2703 1875740 - 1875761 + r 72 -7.3 -3.88137 | opp_overlap 1875737 1875735 AACAGAACATCATCA TGACTTGCG ATTT CACAAGTCA TTTGTAGCGGGTTAT Ctha_1586 1878596 - 1876086 - | ATP-dependent protease La TERM 2704 1876310 - 1876325 + g 79 -2.6 -5.33405 | gap 1, overlap 1876311 CGGTAATGCCGGCAC GTT-TGG CTG CCAGAAC TTTTTCTTTAATGCC TERM 2705 1876958 - 1876946 - G 72 -4.8 -4.64861 | GCGCGTCAAAAGAAA CGTC TTCTG GACG AATGCCGTGCTCTTC TERM 2706 1878369 - 1878359 - G 82 -3.2 -5.52384 | TTTGCATCAAAAAAA CAAC CGG GCTG TTAGGCGCAAGGCTT TERM 2707 1878472 - 1878449 - G 78 -6.7 -4.63932 | overlap 1878467 1878470 CATCGGGGAACAAAA CCGTGTTTC GCAATG GAAGCACGG GGAGCGCCCCATCAA Ctha_1587 1878813 - 1879442 + | protein of unknown function DUF374 TERM 2708 1879942 - 1879992 + G 82 -11.2 -3.54543 | opp_overlap 1879972 1879973, overlap 1879943 CTTAAACTTTCTTGT TATTCATGCGGCAAAATCGCCTTT CAA AGATGCGGTTTTGCCGCTTGGACG TTTGCGCGAATCGGT TERM 2709 1879943 - 1879991 + G 78 -12.5 -2.72511 | opp_overlap 1879972 1879973, overlap 1879942 TTAAACTTTCTTGTT ATTCATGCGGCAAAATCGCCTTT CAA AGATGCGGTTTTGCCGCTTGGAC GTTTGCGCGAATCGG Ctha_1588 1879466 - 1880539 + | tetraacyldisaccharide 4'-kinase Ctha_1589 1880679 - 1882358 + | metallophosphoesterase TERM 2710 1882381 - 1882413 + F 100 -11.4 -5.26875 | opp_overlap 1882386, overlap 1882386 1882411 GTCACCCCACTCACC GGAAAGGCCATCTT GCAAA ATGATGGCCTTTTC TTTTTTCCTTCGGAC TERM 2711 1882408 - 1882386 - f 70 -7.7 -3.61178 | opp_overlap 1882381 1882386 CCCACTCACCGGAAA GGCCATCTT GCAAA ATGATGGCC TTTTCTTTTTTCCTT TERM 2712 1882386 - 1882408 + F 100 -7.7 -5.47846 | opp_overlap 1882386, overlap 1882381 CCCACTCACCGGAAA GGCCATCTT GCAAA ATGATGGCC TTTTCTTTTTTCCTT TERM 2713 1882812 - 1882828 + G 71 -7.9 -3.98826 | opp_overlap 1882815, overlap 1882815 CTACACTTATGGCTA CAAGCGC TTT GCGCTGG TTTCTGCCTTGCTCA Ctha_1590 1882540 - 1883469 + | cation diffusion facilitator family transporter TERM 2714 1883880 - 1883890 + G 73 -2.4 -5.18726 | opp_overlap 1883880 TTGCGGTAGTATTAA CCGC GCT GGGG TTTTTCTTCTCGCAA TERM 2715 1884241 - 1884231 - g 77 -6.8 -4.4009 | overlap 1884232 TTCCAGTTGACAAAA CGCA CTA TGCG TTAGCGCCGGAGTTA TERM 2716 1884493 - 1884542 + G 71 -7.4 -3.91084 | gap 2, overlap 1884538 1884539 TATTGAACGGGTCAA GCAAG-CCGCGAAGGT-GTTTC TTATTAGC GGAACAACTTTCGTGGTCTTGC TTTGGTTGCCGATGC TERM 2717 1884837 - 1884851 + G 88 -7.8 -4.98436 | TGGATATTATCATTG TGGCGG CGG TCGCCA TTTTTATGCTATTCG Ctha_1591 1883543 - 1884943 + | multi antimicrobial extrusion protein MatE TERM 2718 1885020 - 1884999 - T 88 -8.7 -4.74103 | opp_overlap 1884999 TTGCTAATGTAAAAA GCCTTTCCT TTAG AGGAAGGGC TTTTTGCTGAAGTTC TERM 2719 1884999 - 1885020 + T 91 -10.9 -4.74801 | opp_overlap 1884999 TTGCTAATGTAAAAA GCCTTTCCT TTAG AGGAAGGGC TTTTTGCTGAAGTTC Ctha_1592 1885693 - 1885043 - | hypothetical protein Ctha_1593 1886352 - 1885693 - | hypothetical protein Ctha_1594 1887293 - 1886427 - | methyltransferase FkbM family TERM 2720 1886490 - 1886514 + g 95 -2.4 -6.09888 | gap 1 ATGAGGGGATGTTTG TTTA-TTCATT ATTG AATGAAATAAA TTTTTTTTCTTGCCA TERM 2721 1886675 - 1886663 - G 72 -9.1 -3.51934 | overlap 1886661 CGCCTTTCATAAATA GGTGC TCA GCACC TTCAACATCAATTTT Ctha_1595 1888037 - 1887300 - | short-chain dehydrogenase/reductase SDR TERM 2722 1887969 - 1887956 - G 88 -3.7 -5.72207 | GCGAAACTAAAAAAA GCGCG TCAC CTCGC TCGGCGAAAAGCCGT Ctha_1596 1889340 - 1888042 - | FAD linked oxidase domain protein Ctha_1597 1889771 - 1889355 - | acid phosphatase/vanadium-dependent haloperoxidase related TERM 2723 1889456 - 1889467 + g 74 -3.6 -5.00884 | TTTTTTCTCGCAGCT CGGG CAAA TCCG TTTTTTCGGCAAGCT Ctha_1598 1890625 - 1889771 - | UbiA prenyltransferase TERM 2724 1889820 - 1889806 - G 79 -2.1 -5.54338 | overlap 1889807 CAACTAAAATAAAAA CGATC CACGC GATCA AGGTAATCTGCATCG Ctha_1599 1891066 - 1891380 + | RNP-1 like RNA-binding protein TERM 2725 1891406 - 1891426 + T 100 -11.1 -6.09133 | CAACAAAATCTATTG CCGCCGG CCTTAAA CCGGCGG TTTTTTTTTGCCCTC Ctha_1600 1892639 - 1891572 - | hypothetical protein TERM 2726 1892244 - 1892234 - G 79 -3.2 -5.42259 | CCACCGCCAAAAAAA TCGC GCC ACGA ACATAGCTTTCCGCG Ctha_1601 1894050 - 1892665 - | Phosphoglucosamine mutase TERM 2727 1894967 - 1894950 - g 76 -4 -5.0133 | opp_overlap 1894950 1894955, overlap 1894952 GACTTTTTCAAAAAA CACGGC GTGAAG GCCGAG TTTGTCGGCCATCCG TERM 2728 1895198 - 1895182 - g 70 -10.1 -3.04398 | opp_overlap 1895181 1895191, overlap 1895181 TTTTGCTCGGAAAAG CGCCGAA CCT TCCGGCG GAGTTTTATCAAAAA TERM 2729 1895240 - 1895228 - g 72 -10.5 -2.83522 | opp_overlap 1895227 1895226, overlap 1895227 ATTTCTCGAGCAAAG CGGCG TGA CGCCG ACATTTGTGACCGCT Ctha_1602 1894485 - 1895639 + | lipid-A-disaccharide synthase TERM 2730 1896459 - 1896482 + G 72 -8.8 -3.63922 | gap 1, overlap 1896457 1896460 GTTCATCGTGTTCAA GCCGTCGG-GC CTT GCGCCGACGGA TATTTTGGAGGCGGT TERM 2731 1896460 - 1896481 + G 79 -12.3 -2.78032 | gap 1, overlap 1896459 1896457 TTCATCGTGTTCAAG CCGTCGG-GC CTT GCGCCGACGG ATATTTTGGAGGCGG Ctha_1603 1896016 - 1897245 + | Proline dehydrogenase TERM 2732 1897231 - 1897252 + T 71 -9.5 -2.52795 | opp_overlap 1897220 1897231 1897233, overlap 1897220 GAAATGAGCCGAAGA CATCTTCCT CATT AGGAGGATG TCAATTCGCCCACTT Ctha_1604 1898492 - 1897284 - | AAA ATPase central domain protein TERM 2733 1897770 - 1897752 - G 82 -6 -5.14563 | opp_overlap 1897751 1897759 1897761 GGCTTCATCAAAAAA CAAAACAG CGC CGGTTTTG GCTGCTTTTTGAAAC TERM 2734 1898581 - 1898546 - R 78 -7 -4.41114 | TGAGTACATAACAAA TTTTCGGGTTAGAAAA AAAA TTTTCAAGCCCAAAAA AGCAAAGTGGTATGG Ctha_1605 1899518 - 1898643 - | hypothetical protein TERM 2735 1899573 - 1899588 + r 70 -4.7 -4.57073 | opp_overlap 1899584 GTGATGTTTTACGCG GCGAA GAAAAA TTCGC TTTTTCGAAAAGCTA TERM 2736 1899604 - 1899584 - R 78 -5.5 -5.06414 | opp_overlap 1899573 CGCGGCGAAGAAAAA TTCGCTTTT TCG AAAAGCTAA GGAAACAGTCGAAGG TERM 2737 1899669 - 1899644 - R 100 -9.1 -5.40072 | overlap 1899646 TTGGGGGTAAAAAAA TAGAAGCATCT TGAT AGATGCTTCAA CATGCAGGTTCTCGT TERM 2738 1899667 - 1899646 - R 93 -11.7 -4.34482 | overlap 1899644 GGGGGTAAAAAAATA GAAGCATCT TGAT AGATGCTTC AACATGCAGGTTCTC Ctha_1606 1900488 - 1899706 - | hydrolase, TatD family Ctha_1607 1901028 - 1900513 - | lipoprotein signal peptidase TERM 2739 1900608 - 1900622 + g 70 -10 -3.04144 | opp_overlap 1900596 AAACGCCAATCGTAA TTGCCG AAT CGGCAA TGTTAAAAATCGGCC TERM 2740 1900724 - 1900694 - G 74 -5.4 -4.72029 | TCGAAGTGAATAAAA TCGATGACTTGGCC GTA AGCGAAGCGATCGA TGAGGTTGCCGATAG Ctha_1608 1902361 - 1901072 - | hypothetical protein TERM 2741 1901205 - 1901220 + g 75 -3.2 -5.14563 | opp_overlap 1901208 TTCCCGCGATATTCA TAACCG GTGC CGGGTA TTTTTTCATCGGGAG TERM 2742 1901343 - 1901323 - G 77 -6.9 -4.4078 | GGGCGGCAAGCAAAA CCGATTG ATCTTCA CAATCGG AAGTGGTGTCGTAGA TERM 2743 1902316 - 1902288 - G 100 -8.2 -5.20154 | opp_overlap 1902281 1902288 1902288 1902289 1902292, overlap 1902289 AGATAACGCAAAAAA TGAACATGTGGC TTCTT ACCACATGTTCC ATTTCTGTTGTTGCC TERM 2744 1902289 - 1902315 + g 73 -11 -2.51178 | opp_overlap 1902288 1902289, overlap 1902288 1902288 1902281 1902292 GATAACGCAAAAAAT GAACATGTGG CTTCTTA CCACATGTTC CATTTCTGTTGTTGC TERM 2745 1902315 - 1902289 - G 93 -11.7 -3.70465 | opp_overlap 1902289 1902288 1902288 1902281 1902292, overlap 1902288 GATAACGCAAAAAAT GAACATGTGGC TTCTT ACCACATGTTC CATTTCTGTTGTTGC Ctha_1609 1903270 - 1902380 - | shikimate 5-dehydrogenase TERM 2746 1903313 - 1903289 - R 91 -8.6 -5.09259 | TATTTTAAAATAAAA TGCCCCGT ATGGGAAGA ACGGGGCA AAAGATTTTGATCGT Ctha_1610 1904743 - 1903334 - | Tetratricopeptide TPR_2 repeat protein TERM 2747 1903389 - 1903379 - G 76 -4 -5.03314 | opp_overlap 1903379 1903382 CTCATTGCTAAAAAA CTTT GGG AAAG TATCTTTTACCATAT TERM 2748 1903658 - 1903636 - G 72 -6.2 -4.19953 | overlap 1903637 CATCCAACTCCAAAA TGCGCTGATA GGT TTTCAGCGCC GCTAAAAAATCGGCC TERM 2749 1903657 - 1903637 - G 70 -9.7 -3.1149 | overlap 1903636 ATCCAACTCCAAAAT GCGCTGATA GGT TTTCAGCGC CGCTAAAAAATCGGC Ctha_1611 1904891 - 1905103 + | hypothetical protein TERM 2750 1905227 - 1905257 + T 79 -11.3 -2.93393 | opp_overlap 1905234, overlap 1905234 CCTCGCCGGGCGCAC AAAAAAAGCCGCA TAAAT TGCGGCTTTTTTA CTTTCTAACATGCAG TERM 2751 1905250 - 1905234 - T 100 -9.4 -5.60993 | opp_overlap 1905227 1905234 GGGCGCACAAAAAAA GCCGCA TAAAT TGCGGC TTTTTTACTTTCTAA TERM 2752 1905234 - 1905250 + T 100 -9.4 -5.42514 | opp_overlap 1905234, overlap 1905227 GGGCGCACAAAAAAA GCCGCA TAAAT TGCGGC TTTTTTACTTTCTAA Ctha_1612 1905529 - 1905287 - | hypothetical protein Ctha_1613 1907323 - 1905674 - | Glucose-6-phosphate isomerase TERM 2753 1906665 - 1906655 - G 74 -5.4 -4.56597 | GGCCGTTTCCAAAAA CCAA TTT TTGG CGGTAATGGCGTTCG TERM 2754 1906732 - 1906744 + g 72 -2.7 -5.07107 | overlap 1906733 1906737 1906738 TAACAAACAAAGTTG TTTCA GGC TGAAG TTTTTTCAGCGTTTC TERM 2755 1907024 - 1907008 - G 71 -3.6 -4.82901 | opp_overlap 1907008 TGCCGTCCACAAAAA TCGGGC GATCG GCGCGA TTTCTTAGCGCCACA Ctha_1614 1907821 - 1907396 - | putative anti-sigma regulatory factor, serine/threonine protein kinase TERM 2756 1908341 - 1908331 - H 72 -5.4 -4.65895 | overlap 1908339 GGCCCGATTCAAAAA GCAT AGC ATGC TTGAAACGTTTCCAA TERM 2757 1909686 - 1909663 - g 72 -3.2 -5.03314 | gap 1, overlap 1909672 TTCAGTCGCAAAAAA TGG-AAGCG ATTGGCA CGCTTGCCA GCGGGATTGCGCATG TERM 2758 1909825 - 1909842 + G 75 -2.7 -5.11033 | opp_overlap 1909825 AGCGTGGAATGAACA TCACCAA GCAG TTGCTGA TTTTTTCGCGTTCTC Ctha_1615 1908417 - 1910765 + | PAS/PAC sensor hybrid histidine kinase TERM 2759 1910783 - 1910841 + F 100 -25.1 -2.75535 | gap 1, opp_overlap 1910783 CAACTTCGTTACACA -TTTTTTTCATGGCGACAGTGGTCTGGA TTGA TCCAGGCTGCTGTCGCCATGAAAAAAAG TGCTTCCAATGTTCC TERM 2760 1910840 - 1910783 - f 100 -24.5 -2.87881 | opp_overlap 1910783 CAACTTCGTTACACA TTTTTTTCATGGCGACAGTGGTCTGGA TTGA TCCAGGCTGCTGTCGCCATGAAAAAAA GTGCTTCCAATGTTC Ctha_1616 1910791 - 1912056 + | Cytochrome-c peroxidase TERM 2761 1912096 - 1912115 + F 100 -10.7 -5.59534 | opp_overlap 1912096 GCTTAACTTGAGAAA GGCCTGC CATTTA GCAGGCC TTTTTTGTTATCATT TERM 2762 1912115 - 1912096 - f 90 -11.4 -3.92522 | opp_overlap 1912096 GCTTAACTTGAGAAA GGCCTGCC ATTT AGCAGGCC TTTTTTGTTATCATT TERM 2763 1912258 - 1912280 + F 100 -7.6 -6.53504 | opp_overlap 1912258 TCGCTTGCCATATCA GGCCGCCTCT TTA ACGGGCGGTC TTTTTTTTTTATATG TERM 2764 1912347 - 1912373 + F 100 -9.6 -5.28481 | TTTCTATTTGTTTTT TTAGCACTCT ATTAAGG AGAGTGCTAA TTTTTTACTTGCATC Ctha_1617 1912535 - 1912822 + | chaperonin Cpn10 TERM 2765 1913978 - 1913968 - g 85 -6.8 -5.02323 | opp_overlap 1913968 1913967 CTACGACAAAGAAAA GCTC CAA GAGC GTTTGGCTAAACTTT TERM 2766 1914313 - 1914290 - g 84 -8.2 -4.58773 | GTCATGAAAGTAAAA GAAGGCAAAG ACGA CTTTGGCTTC AACGCACGCACTGAA TERM 2767 1914503 - 1914468 - g 95 -7.4 -5.30189 | overlap 1914470 CAGAAGATGAAAAAA TGCCTCCAATGCCTCC TGGT GGCGGCATGGGCGGAA TGGGTGGCATGGGCG Ctha_1618 1912877 - 1914529 + | chaperonin GroEL TERM 2768 1914565 - 1914589 + F 85 -7.2 -5.13016 | opp_overlap 1914565 TTGTTTTGTCAAAAA GGTCAATCTT CAAAA AGGATTGGCC TTTTTGCTTTTGATT TERM 2769 1915316 - 1915304 - g 71 -7.7 -3.90744 | GCGCTTGCCAAACAA TTCGC CGA GCGAA CTACCGAAAAAATTT Ctha_1619 1914758 - 1915798 + | pseudouridine synthase, RluA family Ctha_1620 1915825 - 1916211 + | Endoribonuclease L-PSP TERM 2770 1916659 - 1916687 + G 72 -10.2 -2.78547 | overlap 1916657 GCTTTCCGGCGGGCG GCGCGGCCATGC GCCCG GCATCGACGCGC TCGTTCGTGACGTGC Ctha_1621 1916267 - 1917340 + | Lysophospholipase-like protein TERM 2771 1917761 - 1917773 + G 74 -5.5 -4.59853 | overlap 1917749 1917762 ATGTGCCGCATGTGA TTCGC GCG GCGAG TTTTTGGGGCGTTCG TERM 2772 1918161 - 1918171 + G 76 -2.4 -5.40072 | CGAGGAATTTGCCGC CGTG ACG CTCG TTTTTTTGGAAAAAC Ctha_1622 1917349 - 1918191 + | alpha/beta hydrolase fold TERM 2773 1918288 - 1918263 - g 71 -3.9 -4.73388 | gap 1, opp_overlap 1918270 1918275 AATCCTCACCAAAAA GCT-GCACGCGC TCG GCACGCTCGAGC TGGCCGCTTATAGCC TERM 2774 1918531 - 1918552 + G 70 -2.3 -4.93296 | gap 1, overlap 1918534 CGGGGCGAGGTGATG TCGCCGCT GAGTGCG AGCGG-GA TTTTTCTCATCGTGC TERM 2775 1918839 - 1918819 - g 79 -3.1 -5.41143 | opp_overlap 1918803, overlap 1918806 CACGGCGCAAAAAAA TCGCCGGCC TTT GAACGCCGA AACCTGCTCGTACTC Ctha_1623 1918198 - 1919070 + | protein of unknown function DUF6 transmembrane TERM 2776 1919307 - 1919291 - T 100 -9.4 -5.75478 | opp_overlap 1919291 AACGACATAAAAAAA GCGCCA CAACT TGGCGC TTTTTCAGAATCTTT TERM 2777 1919291 - 1919307 + T 88 -9.4 -4.62904 | opp_overlap 1919291 AACGACATAAAAAAA GCGCCA CAACT TGGCGC TTTTTCAGAATCTTT Ctha_1624 1920941 - 1919334 - | 2-isopropylmalate synthase/homocitrate synthase family protein TERM 2778 1921247 - 1921220 - R 76 -7.1 -4.21141 | overlap 1921215 TTTTAAGAAAGCAAA GCATTTTTGCG GGCGTA CTCAAAAATGC CGCCTGCTTCAACAA Ctha_1625 1921767 - 1921207 - | 3-isopropylmalate dehydratase, small subunit Ctha_1626 1923098 - 1921803 - | homoaconitate hydratase family protein Ctha_1627 1924674 - 1923109 - | 2-isopropylmalate synthase Ctha_1628 1926026 - 1924956 - | 3-isopropylmalate dehydrogenase TERM 2779 1925113 - 1925087 - G 72 -9.4 -3.53444 | CGATGGCGCTGTAAA TCAGCTTGCCGG CTT CCGGCAAATCGA GCGTGTTTTCAAACA TERM 2780 1925152 - 1925165 + g 73 -4.5 -4.77173 | opp_overlap 1925142 ACGGAGGCGAGCGTA GCCAG CGGA TTGGC TTTGTTTTGTCCCGC TERM 2781 1925845 - 1925819 - G 75 -6.5 -4.4078 | gap 1, opp_overlap 1925804 1925799 1925839, overlap 1925820 CCGCGCCAAGCAAAA CGGCGTCG-GCA TTTT TGCACGCCGCCA AAGTTTCTTCGGTGA Ctha_1629 1927039 - 1926023 - | ketol-acid reductoisomerase TERM 2782 1926832 - 1926843 + g 74 -3.6 -5.02074 | TATCCGCCCATTTAA CGGC TTCT GCTG TTTTTTCAACCATGA Ctha_1630 1927583 - 1927062 - | acetolactate synthase, small subunit Ctha_1631 1929305 - 1927587 - | acetolactate synthase, large subunit, biosynthetic type Ctha_1632 1931022 - 1929340 - | dihydroxy-acid dehydratase TERM 2783 1930561 - 1930578 + g 72 -8.4 -3.72576 | overlap 1930556 GTCAACTTTTTCGCC GTCGGC CATGAC GCCGAC TTTCATCGGGCCACC Ctha_1633 1931649 - 1932026 + | response regulator receiver protein TERM 2784 1932060 - 1932104 + T 86 -8.1 -4.65263 | overlap 1932061 CGTCATCAAGCAGTC ATAGCGTGAAAAAAGGC CAAAACAGAAC GTCTTTTTTCACGCTAC TTTATTTTCAGGCCT TERM 2785 1932061 - 1932103 + T 85 -11.6 -3.38435 | overlap 1932060 GTCATCAAGCAGTCA TAGCGTGAAAAAAGGC CAAAACAGAAC GTCTTTTTTCACGCTA CTTTATTTTCAGGCC Ctha_1634 1932441 - 1932127 - | sulfur relay protein, TusE/DsrC/DsvC family Ctha_1635 1933111 - 1932692 - | hemerythrin-like metal-binding protein Ctha_1636 1933855 - 1933361 - | hypothetical protein Ctha_1637 1934621 - 1933857 - | protein of unknown function DUF152 TERM 2786 1934659 - 1934671 + H 74 -7.7 -3.93744 | AATTACGACGCCGTA CTTGC TTT GCAAG TTATCTTATTTATCA TERM 2787 1935712 - 1935737 + G 75 -9.7 -3.5393 | AAATGTGTTTGCTGT GTTGGGCTTCG ATGC CGAAGGCCGAC TTTGGGGAAGCTCGT Ctha_1638 1934708 - 1936972 + | two component regulator propeller domain protein Ctha_1639 1938012 - 1937047 - | binding-protein-dependent transport systems inner membrane component TERM 2788 1937190 - 1937173 - G 70 -9.9 -3.04398 | overlap 1937172 GTCGCGGGCGAAAAT CGCATCA ACCG TGATGCG CCCCATGCCCGGCAA TERM 2789 1937239 - 1937227 - G 71 -7.7 -3.88559 | AATCACCTCGATAAA GAGTG CGC CACTC AAGACGAACGGCAGC TERM 2790 1937767 - 1937754 - G 75 -9.5 -3.52849 | overlap 1937752 TAATCACATCAAACA CCGGC TGCT GCCGG CTGAAGCTGCGACCA Ctha_1640 1938277 - 1938047 - | hypothetical protein TERM 2791 1938309 - 1938338 + r 78 -7.1 -4.48987 | overlap 1938311 CAGACAATATTAATT TGGAGATGCCGGT TTTC ACTGGCGTCCCTA TTTTAGTTATAAACA TERM 2792 1938311 - 1938336 + r 72 -7.5 -3.85296 | overlap 1938309 GACAATATTAATTTG GAGATGCCGGT TTTC ACTGGCGTCCC TATTTTAGTTATAAA Ctha_1641 1940131 - 1938365 - | extracellular solute-binding protein family 5 TERM 2793 1938903 - 1938946 + g 72 -3 -5.06451 | gap 1, overlap 1938904 TTTTCACGAATGCCA TCCGCGCCGATTTT-CCAGCC TTC GGCTTCCAAAAGCTGCGCGGC TTTTTTCGGGTCGTA TERM 2794 1939063 - 1939049 - G 84 -8.6 -4.57569 | opp_overlap 1939048 GTATTTGCCCAAAAA TCCATC GAT GATGGA AATTCTATCGATGGC TERM 2795 1939079 - 1939099 + g 85 -5.4 -5.40072 | AATTCTATCGATGGC GTGCGTCA TGGCC TGACGAAC TTTTTTTGAACCGAA TERM 2796 1940019 - 1940036 + g 76 -4.8 -4.77757 | gap 1, overlap 1940022 1940024 ACAACGGTGGTGTCG CGCGCGG AAATG CCGC-CG TTTTCCTTTTTCCCG Ctha_1642 1941155 - 1940352 - | hypothetical protein TERM 2797 1941425 - 1941437 + H 74 -9.1 -3.61646 | opp_overlap 1941424 1941416 1941415 1941425, overlap 1941420 AAAAATCCCAGAAAC TGCGC CAA GCGCA TTGCTTTCTGGGCTT TERM 2798 1941852 - 1941840 - g 72 -4.7 -4.56597 | overlap 1941843 TTTTTGGTGCAAAAA CAGGC GCT GCCGG CACAACGCAACTTTA TERM 2799 1943130 - 1943112 - g 79 -8.2 -4.30576 | opp_overlap 1943112 TTGTTAGGACGAAAA GCGCTTTT GAG AAAAACGC GCTTGCTATCGAATT Ctha_1643 1941518 - 1943413 + | peptidase S9 prolyl oligopeptidase active site domain protein TERM 2800 1943428 - 1943416 - f 83 -7.7 -4.63107 | ACGAAATAAGTAAAA CGCAA TTT TTGCG AAACCGACGAACTGT Ctha_1644 1943445 - 1944134 + | Haloacid dehalogenase domain protein hydrolase TERM 2801 1945078 - 1945107 + G 89 -9.3 -4.66163 | opp_overlap 1945078 1945085 ATCGATTTTAGCCAA GTACGAAGAACGC GGTT GCATTCTTCGCAC TTTTTGGATGAAGAT TERM 2802 1945107 - 1945078 - g 85 -13.7 -3.06915 | opp_overlap 1945078, overlap 1945085 ATCGATTTTAGCCAA GTACGAAGAACGC GGTT GCATTCTTCGCAC TTTTTGGATGAAGAT Ctha_1645 1944322 - 1945176 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Ctha_1646 1945835 - 1945173 - | Haloacid dehalogenase domain protein hydrolase TERM 2803 1945425 - 1945413 - G 78 -4.7 -5.09225 | overlap 1945414 AGTCGATTCAAAAAA CGGCG CGA CGCCC AGCACTTGCAACGTG Ctha_1647 1946121 - 1948343 + | TonB-dependent receptor plug TERM 2804 1948395 - 1948371 - f 74 -10.1 -2.77899 | opp_overlap 1948371, overlap 1948368 GGTTGTTATGAAGCA TTCCCTACC GCTTTAA GGTAGGGAA TTAGCTGATTGATTT TERM 2805 1948371 - 1948395 + F 76 -10.1 -3.15252 | opp_overlap 1948368 1948371 GGTTGTTATGAAGCA TTCCCTACC GCTTTAA GGTAGGGAA TTAGCTGATTGATTT TERM 2806 1948838 - 1948822 - g 72 -2.9 -5.01811 | overlap 1948823 TGATGAAATTAAAAA CGCAGGT GCA ACCTCCA TCATGGAAGCCTTAC TERM 2807 1948981 - 1948963 - g 72 -8.2 -3.76186 | opp_overlap 1948962 1948965, overlap 1948959 CATTCAGAAAATCAA CACCACAA CGC TTGTGATG GTTAATAACCGCATC Ctha_1648 1948727 - 1950769 + | TonB-dependent receptor plug TERM 2808 1951262 - 1951272 + G 72 -3.2 -5.03314 | CGAATGGGACGGCCA CACT CGC GGTG TTTTTTGACGATGGG Ctha_1649 1950844 - 1951380 + | hypothetical protein TERM 2809 1951357 - 1951372 + F 79 -7.6 -4.20783 | TTCGGAGAGATTTTA GCACTT GCCG AAGTGC TTTATTGAATAAGAT Ctha_1650 1951459 - 1952391 + | hypothetical protein TERM 2810 1952860 - 1952842 - g 72 -8.8 -3.57263 | opp_overlap 1952852, overlap 1952829 1952830 1952828 1952843 1952853 ACCGTGACGGTGAAA CCGCCAGA AGA TCCGGCGA TGCTGGAAGTTATTA Ctha_1651 1952419 - 1954146 + | integral membrane sensor signal transduction histidine kinase TERM 2811 1955161 - 1955148 - g 71 -3.7 -4.82678 | opp_overlap 1955148, overlap 1955143 CGAGAAAAACTAAAA GCCGC TCAA GCCGC TTTAACCAAAAGAAT Ctha_1652 1954173 - 1955189 + | response regulator receiver protein TERM 2812 1955198 - 1955208 + T 78 -5.4 -5.16572 | TTCATAGCAGCAAGT TCAC ACA GTGA TTTTTTACATTACAT TERM 2813 1955256 - 1955231 - T 100 -11.9 -5.23316 | opp_overlap 1955231 CATTACATTAAAAAA GCGCCAAGTCT TTAT AGAATTGGCGC TTTTTGTTTTTGCGG TERM 2814 1955231 - 1955256 + T 100 -11.9 -5.61881 | opp_overlap 1955231 CATTACATTAAAAAA GCGCCAAGTCT TTAT AGAATTGGCGC TTTTTGTTTTTGCGG Ctha_1653 1959391 - 1955291 - | signal transduction histidine kinase with CheB and CheR activity TERM 2815 1956328 - 1956345 + g 72 -5.5 -4.39696 | opp_overlap 1956341, overlap 1956339 CATAAGTAATTTTTC CGATGGT CATA ACCAGCG TTTGTTGCTTTCGAA TERM 2816 1956909 - 1956919 + g 72 -5.4 -4.45945 | TAGGGCAAAATTCGC TGGA GCA TCCA TTTTCCTTCATGAGT TERM 2817 1957724 - 1957713 - G 70 -2.2 -5.00884 | overlap 1957699 1957717 ATGGTTTTGAAAAAA CGAC CTGC ATCG CCGAAAGCATGAAGC TERM 2818 1957912 - 1957924 + g 85 -3.3 -5.61596 | overlap 1957889 1957913 GCATGTCGGTTGGCA AGCGA ACG TCGCG TTTTTTTCTAAAAAT TERM 2819 1958067 - 1958044 - G 71 -9.6 -3.20617 | gap 1, overlap 1958042 ACGCGAAATGGAACA TGGCA-AGCGC TTT GCGCTGCGCCA CAATTTGGAAGTAAA TERM 2820 1959646 - 1959659 + H 79 -2.4 -5.67063 | ATTAAAATGAAACGG GTTG ATTTCG CAAC TTTTTTTGTAGTAAA Ctha_1654 1959880 - 1961040 + | homocitrate synthase Ctha_1655 1961015 - 1962688 + | transcriptional regulator, NifA, Fis Family TERM 2821 1962750 - 1962774 + F 86 -12.2 -2.78463 | overlap 1962752 TTTTATCGATTCTCG CAGCTATCGC ACAAC GCGGTAGCTG TGTCATAAAAACAAT TERM 2822 1963026 - 1963052 + G 76 -8.7 -4.14472 | gap 1, opp_overlap 1963019 1963045, overlap 1963019 1963045 AGAAGTGATGCCGAT GCC-GCGCATTG GTGA CAAAGCGCCGGC TTTTAGCGCTGTTAC Ctha_1656 1962991 - 1963707 + | Peroxiredoxin TERM 2823 1963717 - 1963770 + T 88 -9.1 -4.84918 | gap 3, opp_overlap 1963727 1963749, overlap 1963719 1963721 1963728 AAGTAACTTTTTCTT GCTGAGCGAATC-CGTATCGGCGG AAAAAAAAA CCGCCGATACGCGGTTTGC-C-GC TTTTATCTTTCTCCG TERM 2824 1963719 - 1963769 + T 77 -9.2 -3.49866 | opp_overlap 1963727 1963749, overlap 1963717 1963721 1963728 GTAACTTTTTCTTGC TGAGCGAATC-CGTATCGGCGG AAAAAAAAA CCGCCGATACGCGGTTTGC-CG CTTTTATCTTTCTCC TERM 2825 1963721 - 1963768 + T 76 -10.7 -2.68835 | gap 1, opp_overlap 1963727 1963749, overlap 1963719 1963717 1963728 AACTTTTTCTTGCTG AGCGAATC-CGTATCGGCGG AAAAAAAAA CCGCCGATACGCGGTTTGCC GCTTTTATCTTTCTC TERM 2826 1963728 - 1963761 + T 76 -10.4 -2.79919 | gap 1, opp_overlap 1963727 1963749, overlap 1963721 1963719 1963717 TCTTGCTGAGCGAAT C-CGTATCGGCGG AAAAAAAAA CCGCCGATACGCG GTTTGCCGCTTTTAT TERM 2827 1963762 - 1963749 - T 100 -5.2 -6.06723 | opp_overlap 1963728 1963721 1963719 1963717, overlap 1963727 CGGCGGAAAAAAAAA CCGC CGATAC GCGG TTTGCCGCTTTTATC Ctha_1657 1964462 - 1963773 - | alanine racemase domain protein TERM 2828 1964544 - 1964506 - R 100 -8.4 -5.52807 | gap 1, opp_overlap 1964514, overlap 1964508 1964514 AAGAACAAAGAAAAA TGCAA-AAAGGCGTTCT GTTTGA AGAACGCCTTTCTTGAA ATCCACATGGCATTA TERM 2829 1964542 - 1964508 - R 79 -11 -2.90374 | gap 1, opp_overlap 1964514, overlap 1964506 1964514 GAACAAAGAAAAATG CAA-AAAGGCGTTCT GTTTGA AGAACGCCTTTCTTG AAATCCACATGGCAT TERM 2830 1964535 - 1964514 - R 93 -10.2 -4.93595 | opp_overlap 1964514, overlap 1964508 1964506 AGAAAAATGCAAAAA GGCGTTCT GTTTGA AGAACGCC TTTCTTGAAATCCAC TERM 2831 1964514 - 1964535 + r 85 -10.2 -4.1822 | opp_overlap 1964508 1964506 1964514 AGAAAAATGCAAAAA GGCGTTCT GTTTGA AGAACGCC TTTCTTGAAATCCAC Ctha_1658 1965039 - 1964557 - | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 2832 1964603 - 1964630 + g 70 -4.8 -4.37658 | GGCTCAATCGGGTTA TCGCGCATGTCG GTGT TGACATTGGCGA TTTTATCAACGACTT Ctha_1659 1965719 - 1965114 - | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 2833 1965169 - 1965187 + g 79 -7.4 -4.37658 | GGATTTTCCAACGCG TCGCGAGG CAC TTTCGCGA TTTTGTCAGCCACTT TERM 2834 1965289 - 1965279 - G 90 -6.8 -5.33866 | CAAATTTATAAAAAA CTGG CTG CCAG AAGATTCCCGATTCG TERM 2835 1965296 - 1965306 + g 79 -8.2 -4.28045 | opp_overlap 1965295 GGCTGCCAGAAGATT CCCG ATT CGGG TTCTTTTCGTCATCT Ctha_1660 1966412 - 1965732 - | Tetratricopeptide TPR_2 repeat protein TERM 2836 1965887 - 1965914 + g 80 -6.3 -4.7373 | gap 1 GATACGACGGTGTGA GCGTGTTGAGCG GAGAG CGCTTAGC-CGC TTTTTGATAAAGTGG Ctha_1661 1966636 - 1966451 - | phage shock protein C, PspC TERM 2837 1966769 - 1966757 - R 82 -4.9 -5.40474 | AGCCTTTCAAAAAAA GAAAA AAC TTTTC ATGCCTCTGAACAAA Ctha_1662 1968133 - 1966829 - | MiaB-like tRNA modifying enzyme YliG TERM 2838 1968186 - 1968171 - H 74 -5.4 -4.72486 | GAGAAATTCCAAAAA GATACG CAAC CGCATC CAGAACTTAAAGTCT Ctha_1663 1968354 - 1969373 + | alpha/beta hydrolase fold Ctha_1664 1969342 - 1969989 + | hypothetical protein Ctha_1665 1971535 - 1970054 - | polysaccharide biosynthesis protein TERM 2839 1970389 - 1970403 + g 77 -3.5 -5.13343 | opp_overlap 1970390, overlap 1970390 CAACCGCCGAAACAA TTGGC AAGTA GCCAG TTTTCTTTTCAATTA TERM 2840 1970686 - 1970669 - G 83 -6.3 -5.06414 | gap 1 GTGTTGTAAGAAAAA CGG-TTGC CAA GCAAACCG AAATACCTGAACAAG TERM 2841 1971621 - 1971587 - R 100 -16 -5.63517 | CGCTTAAATAAAAAA TGTGATTAAATCCCCC AAG GGAAGATTTAATCACA TAATGAAACGGCAAG Ctha_1666 1971992 - 1971657 - | anti-sigma-factor antagonist Ctha_1667 1972447 - 1972073 - | hypothetical protein TERM 2842 1972145 - 1972159 + g 82 -2.8 -5.47218 | ATACCACCACCAGTG CGTTGT TGG GTAACG TTTTTTTCGATAAGA TERM 2843 1972502 - 1972483 - R 100 -12.2 -5.45802 | opp_overlap 1972483 GGGTTAAAAGAAAAA GCGTTGGT TTTT ACCAACGC TTTTTCTTTTGAACA TERM 2844 1972483 - 1972502 + r 100 -12.2 -5.45802 | opp_overlap 1972483 GGGTTAAAAGAAAAA GCGTTGGT TTTT ACCAACGC TTTTTCTTTTGAACA Ctha_1668 1972910 - 1972557 - | hypothetical protein TERM 2845 1972695 - 1972709 + g 70 -2.1 -5.05301 | CGGCACTTTTGAAAT CACTT CTTCA AGGTG TTTTTGTGCTTCTTT Ctha_1669 1973805 - 1973101 - | protein of unknown function DUF1275 Ctha_1670 1974193 - 1974774 + | hypothetical protein Ctha_1671 1976565 - 1974838 - | hypothetical protein Ctha_1672 1976697 - 1978181 + | glycogen/starch synthase, ADP-glucose type Ctha_1673 1978184 - 1978792 + | hydrolase, HAD-superfamily, subfamily IIIA TERM 2846 1978866 - 1978877 + G 70 -2.2 -5.02357 | AATGAAAAGCCGCAG TTCG TTTT CGAG TTTTCTTTCCTTGTG Ctha_1674 1978852 - 1980060 + | hypothetical protein Ctha_1675 1980247 - 1981449 + | exodeoxyribonuclease VII, large subunit TERM 2847 1981483 - 1981504 + F 73 -7.3 -4.0371 | gap 1 GCTTCTGTTGCATTG CGCGATGACG AAC TGTC-TCGCG TTTCTATCCACAATC Ctha_1676 1981545 - 1982924 + | DNA repair protein RadA TERM 2848 1982963 - 1982973 + F 100 -3.2 -6.43839 | ACATCGATAATTTCA TGCG TCT TGCA TTTTTTTTTTCCTCT Ctha_1677 1983061 - 1983354 + | hypothetical protein Ctha_1678 1985016 - 1983577 - | RND efflux system, outer membrane lipoprotein, NodT family TERM 2849 1984326 - 1984281 - G 83 -10.5 -3.75153 | gap 1, opp_overlap 1984281 1984300, overlap 1984296 GCGGTGGAATGGAAA GCTGCGTGCTATAAAGCAATGC GCG GCTTTGCTCCACAG-ACGCGGC GTTTTGCTGCCCGGC TERM 2850 1984859 - 1984896 + g 80 -7 -4.7153 | gap 1 CCTTTGGCTTGCGCG CCGCCTCGAA-CGATGC CTTCC GTGTCGATTTGCGGCGG TTTTTCAAGTTCTTT TERM 2851 1984944 - 1984975 + g 78 -5.2 -4.99035 | gap 1, opp_overlap 1984947 CTAATCCTACCGAGA GAATCGCGATGAG CAAAACC CACA-CGCGATTC TTTTTATATGACTGA TERM 2852 1985029 - 1985041 + r 89 -4.1 -5.78622 | overlap 1985028 CATTAAAGTTCAGTG TCGTT GCT GACGA TTTTTTTTGAGCTAA Ctha_1679 1988162 - 1985016 - | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family TERM 2853 1987059 - 1987035 - G 79 -4.2 -5.16841 | overlap 1987036 CGATAGGAAGAAAAA TGTACCGATG ACCGA CACCGGCACG GCAACCGCCGGAATA Ctha_1680 1989248 - 1988181 - | efflux transporter, RND family, MFP subunit TERM 2854 1989398 - 1989346 - R 100 -17.6 -4.74103 | gap 1, overlap 1989347 1989349 TCTTTAACCGAAAAA TTACTTTTTTCATCTATCTGACATC CTAA AATGCCAGATAGATGAAAAAAG-AA TCAAATGCCTTTTAG TERM 2855 1989398 - 1989347 - R 100 -19.2 -3.4398 | overlap 1989346 1989349 CTTTAACCGAAAAAT TACTTTTTTCATCTATCTGACATC CTAA AATGCCAGATAGATGAAAAAAGAA TCAAATGCCTTTTAG TERM 2856 1989396 - 1989349 - R 100 -21.8 -3.28592 | overlap 1989346 1989347 TTAACCGAAAAATTA CTTTTTTCATCTATCTGACATC CTAA AATGCCAGATAGATGAAAAAAG AATCAAATGCCTTTT Ctha_1681 1989977 - 1989399 - | transcriptional regulator, TetR family TERM 2857 1990062 - 1990048 - H 100 -5.8 -5.82388 | AAATTGCAAAAAAAA TTCATT AAA AATGAA TGAGCTCGTTTTTTT TERM 2858 1990150 - 1990164 + H 88 -6.4 -5.24129 | overlap 1990162 ATATTGTTTTCGTGC GAGCTA TGA TGGCTC TTTTTTATCAAAAAA TERM 2859 1990748 - 1990764 + G 74 -3.7 -5.0133 | opp_overlap 1990747 AGTTTTTTGAACGAC TAAATGC AAA GCATCTA TTTTTTGAGCGCGTG Ctha_1682 1990204 - 1990890 + | hypothetical protein Ctha_1684 1992356 - 1991553 - | Hydroxyethylthiazole kinase TERM 2860 1992666 - 1992683 + H 74 -9.9 -2.73676 | opp_overlap 1992665, overlap 1992663 TTCTCTTTACACTAT CTACAGC TTCG GCTGTAG TCAATTTACTTTAAA Ctha_1685 1992718 - 1992948 + | hypothetical protein TERM 2861 1992988 - 1993024 + F 100 -9 -5.64421 | opp_overlap 1992978 1992976 1992988 AGACATCATGGATAA GCCATCAATGATAA AGAAGTAGG TTATTATTGATGGC TTTTTTCTTTCGACT Ctha_1686 1993178 - 1994269 + | GTP-binding protein YchF TERM 2862 1994350 - 1994381 + G 79 -11.8 -3.14372 | opp_overlap 1994349 1994350 1994352, overlap 1994348 1994356 GTTGGCTTCTCAAAT CATCAACATTGTAG GGGC TTACGATGTTGATG TCGTTATTTTGGTTG Ctha_1687 1994297 - 1994749 + | hypothetical protein Ctha_1688 1994757 - 1995116 + | hypothetical protein TERM 2863 1995263 - 1995239 - g 78 -5 -5.08086 | AGAAAAAACACAAAA CGTAGTGACT GCGGA AATCTCTACG GCGACTTTACCGGTA TERM 2864 1995460 - 1995448 - g 79 -4.1 -5.1861 | TTGACGAGGAAAAAA TTCCG GGA CGAAA TGAAAATGAGTTTAT Ctha_1689 1995123 - 1995551 + | hypothetical protein TERM 2865 1995569 - 1995598 + T 90 -12.3 -3.62597 | opp_overlap 1995569 TTTCGAGCAAAAAAA GAGTTCCCACTTT TTGC AAAATGGGAACTC TTGTTGGGCAATAAG TERM 2866 1995598 - 1995569 - T 100 -14.5 -5.52384 | opp_overlap 1995569 TTTCGAGCAAAAAAA GAGTTCCCACTTT TTGC AAAATGGGAACTC TTGTTGGGCAATAAG Ctha_1690 1996590 - 1995628 - | hypothetical protein TERM 2867 1995987 - 1996018 + g 80 -9.6 -3.90588 | gap 1 AAATCGGTTGCAAGG TGTTGAGCTGTT-CG TGG CGCAACAGCTTGACA TTTCCTTCGCGAATC Ctha_1691 1997914 - 1996700 - | amidohydrolase Ctha_1692 1998473 - 1998090 - | hypothetical protein Ctha_1693 1999587 - 1998481 - | alanine dehydrogenase Ctha_1694 1999830 - 2000360 + | hypothetical protein TERM 2868 2000712 - 2000695 - g 75 -2.7 -5.10516 | opp_overlap 2000695 AAAAACCAAACAAAA GTTCTTT AAGG ATAGAAC GATTTATTATTCCAC TERM 2869 2000853 - 2000834 - g 79 -3 -5.32882 | gap 1, opp_overlap 2000834 2000837, overlap 2000837 GACGATGACAAAAAA TATCCTGAA AAA TTCAG-ATA TGATGTCAAATTAAA TERM 2870 2001160 - 2001139 - g 75 -3 -5.09895 | TAGGGACTTAAAAAA TTCGCTTG ATACGG CAAGGGAA GAAAGAACGATTGAG Ctha_1695 2000429 - 2001286 + | hypothetical protein Ctha_1696 2003799 - 2001310 - | primosomal protein N' TERM 2871 2002129 - 2002140 + g 80 -7.2 -4.60487 | TCCGCAATAATGGCA GCGC AAAT GCGC TTTTTGAAAATGATA TERM 2872 2002748 - 2002720 - G 74 -5.9 -4.56775 | opp_overlap 2002729, overlap 2002721 2002729 ATTGTCGCCGAAAAA TGCCTGAAATCGC GCG GCGATTTGCGGCG TTAGGGAAATTTCGG TERM 2873 2002747 - 2002721 - G 70 -9.4 -3.33744 | opp_overlap 2002729, overlap 2002720 2002729 TTGTCGCCGAAAAAT GCCTGAAATCGC GCG GCGATTTGCGGC GTTAGGGAAATTTCG TERM 2874 2002922 - 2002936 + g 84 -8.5 -4.57341 | TAAACCGGTTCTTGC GCCGC CGTGA GCGGC TTTTTCGCAGAAGTT TERM 2875 2003086 - 2003069 - G 76 -4.1 -5.00616 | TCTTCCTTGAAAAAA CGCTTTT GCTC AAACGCG AGAATCCGTTCGAAA TERM 2876 2004821 - 2004800 - g 78 -6.5 -4.7254 | gap 1, overlap 2004802 ATGGCTCAGTAAAAA GCGCCG-TGC TCG GCAACGGCTC AACGGTCGAGGCGGA Ctha_1697 2004061 - 2005422 + | Carotene 7,8-desaturase TERM 2877 2005423 - 2005411 - T 70 -2.7 -5.03314 | CGCATTCGCAAAAAA TTCAC GCC GTAAA AAAACGAAAGGCTGG TERM 2878 2005472 - 2005489 + T 100 -11.3 -5.81412 | opp_overlap 2005486 TTCCTAATTTTCTGA TGCCTGC GAAA GCAGGCA TTTTTTTTGCCTAAA TERM 2879 2005610 - 2005575 - T 100 -9.7 -5.2853 | opp_overlap 2005575 TAGGTAAAAAGAAAA GCCGCCCGAAAAAGC GATGAA GCTTTTCACGGCGGC TGAGTTCTTTAAATG Ctha_1698 2009474 - 2005641 - | magnesium chelatase, H subunit TERM 2880 2005831 - 2005847 + g 77 -3.5 -5.24129 | opp_overlap 2005831 ATGTTCGGGTCAAAA GCGTAGG TTT CCGCCGC TTTTTTATAAACCCA TERM 2881 2006014 - 2006026 + g 73 -7.7 -4.13767 | ACGCGCAACGCGGTA TCGAC ATC GTCGA TTTTCACATCCGCCG TERM 2882 2006348 - 2006368 + g 80 -13.3 -2.52464 | opp_overlap 2006345 2006344, overlap 2006353 CATCCACATAAGTTC CGTAAGCGC CGG GCGCTTGCG TGAATTGGCGGGCGG TERM 2883 2007100 - 2007115 + g 72 -2.6 -5.07053 | gap 1 TTTTGCACAAAGTTT TTGCACG CGT CGT-CAA TTTTTTCGCGTAGTT TERM 2884 2007194 - 2007211 + g 73 -7.7 -4.08216 | opp_overlap 2007194 2007197, overlap 2007195 AGCTATTTTGATACA TCATGCC TTCT GGCATGG TTTTGAGGAAAATCG TERM 2885 2007493 - 2007514 + g 70 -5.1 -4.41348 | gap 1, opp_overlap 2007493, overlap 2007494 GTTTTGTCCAAACCA CGCTCG-CGA TAG TCGTCGAGCA TTTCTTTCAGCGCAG TERM 2886 2007587 - 2007610 + g 73 -10.3 -3.06492 | opp_overlap 2007582 2007584, overlap 2007596 CGTGCGAAATCATGG TGGCCAGGC CGCGAC GCTTGGCCA TGTTGGCCTCGCTCG TERM 2887 2008478 - 2008466 - G 74 -6.9 -4.25848 | AATCTTGCATGAAAA GCGGC TGC GCCAC GATATACGGCACATT TERM 2888 2009678 - 2009692 + r 73 -4.4 -4.86621 | opp_overlap 2009678 CTGAAAAATTCAAAG TTTTAA GGA TTAAAA TTTTTGCTTAAAACT Ctha_1699 2010845 - 2009700 - | oxidoreductase domain protein TERM 2889 2013173 - 2013148 - g 76 -4.6 -5.00616 | gap 1 CGTTGCCGGAAAAAA GGCGCGAGCCG GATTT CAGC-CGAGCC ATCGAAGTGCAAGGT Ctha_1700 2011218 - 2014160 + | excinuclease ABC, A subunit Ctha_1701 2014463 - 2014164 - | hypothetical protein Ctha_1702 2016379 - 2014628 - | ABC transporter-related protein TERM 2890 2014913 - 2014939 + g 73 -4.2 -4.82901 | opp_overlap 2014915, overlap 2014915 TTTCGGTTTTCGAAT GAGCGCGCGGGC AAT GCAAGTGCGCTG TTTTTGTCCGCCGGA TERM 2891 2014915 - 2014937 + g 71 -6.8 -4.03995 | opp_overlap 2014915, overlap 2014913 TCGGTTTTCGAATGA GCGCGCGGGC AAT GCAAGTGCGC TGTTTTTGTCCGCCG TERM 2892 2015669 - 2015698 + g 80 -6.5 -4.8622 | opp_overlap 2015660 2015659, overlap 2015668 2015671 AAAAAGCGCTTGCAC TTTTGCGAGCGAA AGAT TTTGCTCGTAATA TTTTTGATTGAGCAC TERM 2893 2015671 - 2015696 + g 79 -9.1 -4.05402 | opp_overlap 2015660 2015659, overlap 2015668 2015669 AAAGCGCTTGCACTT TTGCGAGCGAA AGAT TTTGCTCGTAA TATTTTTGATTGAGC TERM 2894 2016181 - 2016170 - G 93 -7.2 -5.79595 | TTTGAAAAGAAAAAA GCCG CTGG CGGC TGAAGATAAAATCGC Ctha_1703 2017728 - 2016415 - | TPR repeat-containing protein TERM 2895 2016518 - 2016530 + g 75 -6.3 -4.54821 | overlap 2016506 ATTCGCAAGAGGCTT TCGTT GAT AACGA TTTTATAATTCAAAT Ctha_1704 2018150 - 2019880 + | integral membrane sensor signal transduction histidine kinase Ctha_1705 2019901 - 2020848 + | response regulator receiver protein TERM 2896 2020867 - 2020896 + T 100 -15.1 -3.16936 | opp_overlap 2020873, overlap 2020873 CTGTGTAACACAATA AAAAAAGCCCCGC CAAA GCGGGGCTTTTTG CTTTTCCTCAAGTTT TERM 2897 2020890 - 2020873 - T 100 -14.1 -5.94214 | opp_overlap 2020867 2020873 AACACAATAAAAAAA GCCCCGC CAAA GCGGGGC TTTTTGCTTTTCCTC TERM 2898 2020873 - 2020890 + T 100 -14.1 -5.1166 | opp_overlap 2020873, overlap 2020867 AACACAATAAAAAAA GCCCCGC CAAA GCGGGGC TTTTTGCTTTTCCTC Ctha_1706 2024640 - 2020918 - | alpha amylase catalytic region TERM 2899 2020963 - 2020975 + g 79 -7.7 -4.46576 | TGTTTTCGTTTTTGA GTCAG AGG CTGAC TTTGTTGTCGTTTTT TERM 2900 2024591 - 2024607 + g 70 -2.2 -5.07053 | TGAAAGTCTTTTTTG GCGAAT AAAAA ATCCGC TTTTTTAGGATGCTT TERM 2901 2024633 - 2024655 + g 72 -2.8 -5.08824 | overlap 2024637 2024638 TGCTTGGATGAACGA TAGGTCATAT TAG ATATGGTTTA TTTTTTAGATAGACA TERM 2902 2024637 - 2024651 + g 74 -3.6 -5.0666 | overlap 2024633 2024638 TGGATGAACGATAGG TCATAT TAG ATATGG TTTATTTTTTAGATA TERM 2903 2024964 - 2024945 - R 100 -12.2 -5.71295 | ACATAAAAACAAAAA GCCTTGAG CTGT CTCAAGGC TTAAAAAATGAAAAT Ctha_1707 2026294 - 2024993 - | Ribulose-bisphosphate carboxylase TERM 2904 2025167 - 2025181 + g 73 -4.2 -4.82154 | opp_overlap 2025167 GGGCACAAATCCAAA GTCCGT AGA ACCGAC TTTTTCATATACATT TERM 2905 2025244 - 2025217 - G 71 -10.6 -2.67747 | gap 1, opp_overlap 2025216 2025217, overlap 2025216 GCGTCACAGCAGAAT CGC-TACCGCCAG GAA CTGGCAGCACGCG CTTGATGTGTCCCAT Ctha_1708 2026726 - 2026301 - | protein of unknown function UPF0047 TERM 2906 2026876 - 2026896 + H 78 -3.3 -5.40474 | opp_overlap 2026878 2026879, overlap 2026879 GATTCATTTTGCGTA AAGGTCTTT CGA AAAGACTTG TTTTTTTGGAAAACT TERM 2907 2026879 - 2026893 + H 81 -7.2 -4.79949 | opp_overlap 2026879 2026878, overlap 2026876 TCATTTTGCGTAAAG GTCTTT CGA AAAGAC TTGTTTTTTTGGAAA Ctha_1709 2026960 - 2027658 + | TrkA-N domain protein Ctha_1710 2028449 - 2027661 - | protein of unknown function DUF62 Ctha_1711 2029334 - 2028480 - | methyltransferase FkbM family Ctha_1712 2030533 - 2029451 - | permease YjgP/YjgQ family protein TERM 2908 2030271 - 2030228 - G 85 -6 -5.37345 | opp_overlap 2030236, overlap 2030236 GCCAACGAGAAAAAA CGGCAAAAGCAGGCGATATA AACT TATCCCGCCTGCTTTCATGG CCGTTAGTTCAGTTT TERM 2909 2030236 - 2030263 + g 72 -8.4 -3.74747 | opp_overlap 2030228 2030236 GAAAAAACGGCAAAA GCAGGCGATATA AACT TATCCCGCCTGC TTTCATGGCCGTTAG TERM 2910 2030263 - 2030236 - G 90 -10.6 -4.33739 | opp_overlap 2030236, overlap 2030228 GAAAAAACGGCAAAA GCAGGCGATATA AACT TATCCCGCCTGC TTTCATGGCCGTTAG Ctha_1713 2031463 - 2030552 - | band 7 protein TERM 2911 2030757 - 2030772 + g 81 -3.3 -5.30686 | TCTTGTTTTTCTTTT TGCAA CACAAA TTGCA TTTTTTGTGCCTCTT TERM 2912 2030889 - 2030910 + g 82 -2.9 -5.4756 | opp_overlap 2030889 CCGCGCGAGGCAAAA TCGTCGCGA ATGC TCTCGAAGA TTTTTTGTTGAAATT TERM 2913 2031559 - 2031530 - R 86 -9.3 -4.4959 | gap 1, overlap 2031533 TTTAACCAAGCAAAA GTA-GGGGCAGGTT TCA ACCCCGCCCCCTAC AGAATTGCGGTTGCG TERM 2914 2031555 - 2031533 - R 80 -11.2 -3.19941 | overlap 2031530 AACCAAGCAAAAGTA GGGGCAGGTT TCA ACCCCGCCCC CTACAGAATTGCGGT TERM 2915 2031644 - 2031630 - R 74 -8.6 -3.67597 | overlap 2031640 CTTCTTAGCGAAGAA TCCGAT ATA ATCGGA CGAAAGGATGCTTCG Ctha_1714 2034635 - 2031690 - | peptidase M16 domain protein TERM 2916 2032231 - 2032218 - G 70 -2.3 -5.02476 | opp_overlap 2032228, overlap 2032219 ATATTCGTTAAAAAA TGTCG CCGC CGGCA CGATGTCCTTATCAT TERM 2917 2033026 - 2033036 + g 79 -3.2 -5.40072 | ATGGGCTTGGCCTTT GTGG TGA TCAC TTTTTTTGCAAAGGC TERM 2918 2033111 - 2033128 + g 82 -6.9 -4.77165 | TCTCGACCTTTTCAA CCGTCGT ATCT ACGCCGG TTTTCTTATAGACCG TERM 2919 2033713 - 2033732 + g 71 -7.8 -3.98214 | AATTCGGGGATAGGC TTCGGCTG AAAC CCGCCGAA TTTGTCATCAATCAT TERM 2920 2034207 - 2034218 + g 70 -2.2 -5.00884 | opp_overlap 2034215 AAGGCTGTCGATTCG GTGA TATA TCGC TTTTTTGGCGAGCGT TERM 2921 2034693 - 2034683 - H 79 -8.2 -4.08216 | opp_overlap 2034683 TGATTTCCGCTAAAA GCGC CGG GCGC TTCGGTTGCGATTAT TERM 2922 2034757 - 2034745 - H 71 -3.3 -5.06451 | CACCATTGTAAAAAA CAGTC CCC GCCTG CCGAAATGTTTTGGA TERM 2923 2035549 - 2035563 + G 95 -2.8 -5.82036 | ATGAAAGCCTTGCAA TATCAG CGG CTGCTA TTTTTTATTTGTTCT Ctha_1715 2034957 - 2036537 + | putative membrane protein of unknown function TERM 2924 2036589 - 2036613 + F 71 -4.1 -4.92385 | overlap 2036590 AAAGCGTTTTTCATT TCAGCGGGCGT GTT GCTCGCGCTGG TTTTGTTTGAATATA TERM 2925 2036755 - 2036777 + G 100 -9.8 -4.8622 | opp_overlap 2036747 GCGAACAGTCCGCGC CGGCCTCAAG TAT TTTGTGGCCG TTTTTGATTGCGCCG TERM 2926 2036789 - 2036800 + G 71 -7.2 -4.08692 | overlap 2036797 GCCGTTTTTGATTGC GCCG TTTA CGGC TTTTCAAAGCAGTTA Ctha_1716 2036598 - 2038112 + | putative membrane protein of unknown function Ctha_1717 2040825 - 2038201 - | SMC domain protein TERM 2927 2039213 - 2039235 + g 78 -5.5 -4.88485 | gap 1, overlap 2039199 TCGGCGTCCAAAAGT GCGGCC-AAC TTTT GTGAGGCCGC TTGTTTTTTTCCTTC TERM 2928 2039379 - 2039389 + g 70 -2.4 -4.92757 | overlap 2039367 CCTTTGCTTTGATTT GCCG AAG CGAC TTTTCTTCTTGCTCA Ctha_1718 2042733 - 2040835 - | hypothetical protein TERM 2929 2040928 - 2040955 + g 91 -7.8 -5.24551 | gap 1, opp_overlap 2040915 2040933, overlap 2040932 2040933 AATTTCCATGTCGAT GAAAA-CTGACGC CTC GCGCCAGCTTTTC TTTTTGTTGATTTCG TERM 2930 2040932 - 2040950 + g 83 -4.4 -5.42605 | opp_overlap 2040933, overlap 2040928 2040933 TCCATGTCGATGAAA ACTGACGC CTC GCGCCAGC TTTTCTTTTTGTTGA TERM 2931 2040949 - 2040933 - G 87 -10.1 -4.26076 | opp_overlap 2040932 2040928 2040933 CCATGTCGATGAAAA CTGACGC CTC GCGCCAG CTTTTCTTTTTGTTG TERM 2932 2041214 - 2041230 + g 76 -2.2 -5.32882 | AGCAAAGAAAGATCG GAGTCG AAGTC TGGCTC TTTTTTCTCCTCGTA TERM 2933 2042234 - 2042256 + g 86 -2.6 -5.79595 | overlap 2042235 ATGATTTTCTTGAAC TTCGTGGC CGAAATT GCCGCGAC TTTTTTCTTTTCGAG TERM 2934 2043005 - 2043015 + G 74 -5.4 -4.56597 | opp_overlap 2042996 CCGAAACGGCAAGCC TTGC GGA GCAA TTTTTAAAGCAAGGA Ctha_1719 2042944 - 2043960 + | RNA modification enzyme, MiaB family TERM 2935 2044013 - 2044000 - f 79 -5.2 -5.25735 | GCAAAAAATTAAAAA CGGC GGTTTT GCCG GCGGAAAAACAAGCA Ctha_1720 2044008 - 2044319 + | RNA modification enzyme, MiaB family Ctha_1721 2044574 - 2044813 + | hypothetical protein Ctha_1722 2044987 - 2045565 + | hypothetical protein TERM 2936 2046490 - 2046470 - g 77 -6.8 -4.4078 | GCTGCGCAAGGAAAA GCCGGAAG CGATT CTTGCGGC CATGTATAGCCTTGC TERM 2937 2047080 - 2047103 + G 76 -4.5 -5.00884 | gap 1, overlap 2047082 ATACACGACACACTG GGCGA-CGCC ACGAA GGCGCTCGGC TTTTTTGAAGCGGAT TERM 2938 2047368 - 2047391 + G 76 -4.5 -5.00616 | gap 1, opp_overlap 2047358, overlap 2047370 ATACACGCCACACTG GGCGA-CGCC ACGAA GGCGCTCGGC TTTTTTGAAGCGGAA TERM 2939 2047512 - 2047535 + G 76 -4.5 -5.08169 | gap 1, opp_overlap 2047502, overlap 2047514 ACACACGCCACACTG GGCGA-CGCC ACGAA GGCGCTCGGC TTTTTTGAAGTGTAT TERM 2940 2047661 - 2047684 + G 76 -4.5 -5.00884 | gap 1, opp_overlap 2047650, overlap 2047663 CACACGCCACACTGG GGCGA-CGCC ACGAA GGCGCTCGGC TTTTTTGAAGCGGAT TERM 2941 2047806 - 2047829 + G 76 -4.5 -5.02476 | gap 1, overlap 2047808 ACACACGACACACTG GGCGA-CGCC ACGAA GGCGCTCGGC TTTTTTGAAGCGTAT TERM 2942 2048238 - 2048261 + G 76 -4.5 -5.00884 | gap 1, overlap 2048240 ATACACGACACACTG GGCGA-CGCC ACGAA GGCGCTCGGC TTTTTTGAAGCGGAT TERM 2943 2048501 - 2048478 - g 80 -6.1 -4.87626 | opp_overlap 2048465 GCGGAATATCAAAAA TTCCTTTCC ATGGTA AGAAAGGAA CTGGAAAATTTGGGT Ctha_1723 2045568 - 2048519 + | TPR repeat-containing protein TERM 2944 2049294 - 2049315 + G 76 -5.2 -4.75404 | gap 1, opp_overlap 2049289, overlap 2049307 CACGAGCGAACGCCT TCC-GCAAG GCGCA CTTGCCGGA TTTTTCGTCAAGTTT Ctha_1724 2049169 - 2053605 + | peptidase S8 and S53 subtilisin kexin sedolisin Ctha_1725 2054211 - 2053741 - | hypothetical protein TERM 2945 2054174 - 2054187 + g 70 -2.3 -4.99861 | CATGCCGAACCGTAT GGGTA AAAT TTCCC TTTTTCTAATTGATC Ctha_1726 2056110 - 2054275 - | diguanylate cyclase and serine/threonine protein kinase with TPR repeats TERM 2946 2055951 - 2055961 + g 76 -8.2 -4.09739 | opp_overlap 2055951 CATGTTGTTCGGAAA GGCG AAG CGCC TTTTCCGCGAGTTCC TERM 2947 2056221 - 2056244 + r 73 -6.6 -4.30576 | opp_overlap 2056224 2056227 GGAAAAATTCTGAGA GGAGAAGCGC TTGG GCACTTCCCC TTTTGGTGATAAGAG Ctha_1727 2058405 - 2056303 - | methionyl-tRNA synthetase TERM 2948 2056580 - 2056598 + g 73 -2.4 -5.10029 | opp_overlap 2056575 TCGCATTCAAGGACT TTGGCC ACGCGCA GGTCAA TTTTTTCGAATTCAT TERM 2949 2058506 - 2058535 + r 100 -12.9 -4.42062 | opp_overlap 2058508, overlap 2058508 GGGGATTTTTTGAAG AAGCCCGTTCGAA GTTT TTCGAGCGGGCTG TTTGTTTAGCCGATA TERM 2950 2058508 - 2058533 + r 100 -15.5 -3.81557 | opp_overlap 2058508, overlap 2058506 GGATTTTTTGAAGAA GCCCGTTCGAA GTTT TTCGAGCGGGC TGTTTGTTTAGCCGA TERM 2951 2058533 - 2058508 - R 100 -13.3 -3.62046 | opp_overlap 2058506 2058508 GGATTTTTTGAAGAA GCCCGTTCGAA GTTT TTCGAGCGGGC TGTTTGTTTAGCCGA Ctha_1728 2059625 - 2058555 - | hypothetical protein TERM 2952 2058972 - 2058982 + g 74 -6.8 -4.23647 | overlap 2058958 2058958 TCCGGCTTCGCGCAG CCGA GTT TCGG TTTCTTCCGTAATTT TERM 2953 2059211 - 2059224 + g 70 -5.3 -4.431 | overlap 2059204 CAGGTCTATCGCTTC TGTCA AAAG TGACA TTTTCTGAATCAATG Ctha_1729 2061037 - 2059637 - | hypothetical protein TERM 2954 2059919 - 2059934 + g 86 -4 -5.59534 | TTCAGCGGTATATTG CAGAGA TTCT TCTTTG TTTTTTGTTATCATT TERM 2955 2060294 - 2060282 - G 74 -3.3 -5.05113 | TTGAGAGAAATAAAA CGGAT AAA AGCCG AGTGTTTTATTTGTT Ctha_1730 2063215 - 2061044 - | metal dependent phosphohydrolase TERM 2956 2062509 - 2062529 + g 80 -5.5 -5.00616 | GCCACAACCATCGTA TGCTTTTTT TCG GAAGAAGCA TTTTTTAACGAAAGC Ctha_1731 2063813 - 2063217 - | hypothetical protein TERM 2957 2063573 - 2063590 + g 74 -5.5 -4.58786 | overlap 2063575 TCGTACCTTTCTCGT TCCAGCC TCGG GGCTGAA TTTGTTCTTGTTGCT Ctha_1732 2064484 - 2063828 - | CRISPR-associated protein Cas6 TERM 2958 2064073 - 2064106 + g 81 -3.3 -5.3236 | overlap 2064074 2064077 CCGTCATAAGTTTGT CCGATTCATTATC GAAGTAGA GATAATGAATTGA TTTTTTATCCATTGT Ctha_1733 2065711 - 2064728 - | hypothetical protein TERM 2959 2065532 - 2065518 - G 79 -4.2 -5.18726 | opp_overlap 2065501 TCGGTATAATAAAAA CCGC GCTTGCT GCGG TCGTAAGCAATCGGT TERM 2960 2065622 - 2065639 + g 76 -4.1 -5.055 | overlap 2065624 AAATTCGTCGGCCAA TGTCCGG CAGT TCGGATA TTTTTTCGCCCTTAG Ctha_1734 2066484 - 2065777 - | hypothetical protein TERM 2961 2067032 - 2067001 - g 78 -5 -5.0133 | opp_overlap 2067013 2067014, overlap 2067002 GATTTTCTGAAAAAA TCCGCAACGGCTAC GCTT GCAGCGGTTGCTGG TGGTAGCTCGCTCTT TERM 2962 2067083 - 2067067 - g 76 -2.2 -5.40072 | GGCTGTGCAAAAAAA GAATCG ACGAG CGATGC GCCAAGCGTGCATTC Ctha_1735 2066971 - 2068092 + | TRAP dicarboxylate transporter- DctP subunit TERM 2963 2068136 - 2068110 - T 83 -10.9 -3.42996 | opp_overlap 2068115, overlap 2068115 GATGATCGAGGATAA GAAAACCCGCC GGGCT GGCGGGTTTTT TCATGATAAAAATTG TERM 2964 2068115 - 2068131 + T 100 -11.5 -5.1861 | opp_overlap 2068115 2068110 TCGAGGATAAGAAAA CCCGCCG GGC TGGCGGG TTTTTTCATGATAAA TERM 2965 2068131 - 2068115 - T 91 -10.8 -4.81212 | opp_overlap 2068115, overlap 2068110 TCGAGGATAAGAAAA CCCGCC GGGCT GGCGGG TTTTTTCATGATAAA Ctha_1736 2068996 - 2068160 - | TonB family protein TERM 2966 2068965 - 2068948 - G 72 -5.5 -4.40003 | opp_overlap 2068947 2068948 2068963 CGCCAGAAACATAAA CCGTTGC AGCC GCAATGG GTTTACCCGTTTCAT TERM 2967 2069938 - 2069924 - g 78 -6.4 -4.731 | AATTTATTAAGAAAA CACCAG ACT CTGATG CCGGTGATGCGATTA Ctha_1737 2069464 - 2072253 + | TonB-dependent receptor Ctha_1738 2072292 - 2073680 + | hypothetical protein TERM 2968 2073707 - 2073728 + F 100 -14.5 -6.11243 | opp_overlap 2073707 2073711 ATCTATTTTCTAAGA GCAAGCTCC AAAC GGAGCTTGC TTTTTTTTGTTAACT TERM 2969 2073728 - 2073707 - f 95 -14.5 -3.03243 | opp_overlap 2073707, overlap 2073711 ATCTATTTTCTAAGA GCAAGCTCC AAAC GGAGCTTGC TTTTTTTTGTTAACT TERM 2970 2073724 - 2073711 - f 70 -8.1 -3.36452 | opp_overlap 2073707, overlap 2073707 ATTTTCTAAGAGCAA GCTCC AAAC GGAGC TTGCTTTTTTTTGTT TERM 2971 2073981 - 2073955 - g 70 -2.3 -5.08824 | gap 1, overlap 2073956 TCTTTAGCCAAAAAA CTCGTTCTC-GC GTTA GCTGAAAACGAT ACCACGAAATTATTG Ctha_1739 2073760 - 2074338 + | hypothetical protein TERM 2972 2074389 - 2074354 - T 74 -4.8 -4.96848 | opp_overlap 2074362, overlap 2074356 2074362 CGGTTCACATAAAAA TCTAAAAAGCCTGC TTTCTTTG GCAGGCTTTTTTTA CTTAGGAGTTACGCG TERM 2973 2074381 - 2074362 - T 81 -6.4 -4.93595 | opp_overlap 2074362, overlap 2074356 2074354 ATAAAAATCTAAAAA GCCTGC TTTCTTTG GCAGGC TTTTTTTACTTAGGA TERM 2974 2074362 - 2074381 + T 93 -7.1 -5.63103 | opp_overlap 2074356 2074354 2074362 ATAAAAATCTAAAAA GCCTGCT TTCTTT GGCAGGC TTTTTTTACTTAGGA Ctha_1740 2075094 - 2074576 - | protein of unknown function DUF985 TERM 2975 2075046 - 2075035 - G 80 -7.2 -4.57341 | overlap 2075036 2075037 AACTTCCTTGAAAAA GCCG CCTT CGGC GTGCGGCTCAAGCTC Ctha_1741 2075480 - 2075121 - | hypothetical protein TERM 2976 2075284 - 2075309 + g 100 -9.7 -4.7497 | opp_overlap 2075284 AGTTCCTCAATAGTA TCGGCCACGTT TTTT AACGAGGCTGA TTTTTCATACATCAA TERM 2977 2075445 - 2075462 + g 72 -6.3 -4.21471 | overlap 2075446 GTCTTCGCTGTATTG TTGAAGC AGTT GCTTCAG TTCTTCTTTTGAGCT TERM 2978 2075520 - 2075510 - R 76 -5.4 -4.89339 | AATGAGTTAGAAAAA CAAG TTT CTTG AAAAAGCAAACGCAT TERM 2979 2075612 - 2075623 + r 70 -3 -5.03994 | opp_overlap 2075612 GGGCGGAAACCAAAT CAAA GATT TTTG TTTTTATATCTGGAC Ctha_1742 2076141 - 2075611 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit Ctha_1743 2077303 - 2076152 - | phosphoribosylaminoimidazole carboxylase, ATPase subunit TERM 2980 2076818 - 2076850 + g 72 -4.8 -4.72631 | gap 1 ATCATGTTCTGAGTG CACGG-TGCGGTTGC CATA GCCGTCGTAGCCGTG TTTTCTTCGCTTGAT TERM 2981 2077634 - 2077648 + G 93 -7.2 -5.75945 | GCAATTATGGCGCTT GAAGAA TTT TTCTTC TTTTTTTTCGGAGCT TERM 2982 2077930 - 2077943 + G 72 -5.3 -4.62984 | TTTAATCAGTGGGGT TTTCC TGGT GGAAA TTTTGTATATCGTGG Ctha_1744 2077625 - 2078155 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ctha_1745 2078174 - 2079196 + | basic membrane lipoprotein TERM 2983 2079519 - 2079509 - g 77 -6.8 -4.41844 | opp_overlap 2079509 AAAACTTGCACAAAA GCAC AGC GTGC TGATTGGCGATTACA Ctha_1746 2079264 - 2079770 + | hypothetical protein TERM 2984 2080682 - 2080667 - g 71 -3.3 -4.84673 | GCAAACAACATAAAA TTAGC GCGTTA GCTAA TACTGAAATTTTGAC TERM 2985 2080691 - 2080710 + G 74 -3.6 -5.0916 | opp_overlap 2080691, overlap 2080706 TAGCTAATACTGAAA TTTTGACG TCAG CATCAAAA TTTTTGTATTACGAC TERM 2986 2080799 - 2080778 - g 83 -6.7 -5.0538 | gap 1, opp_overlap 2080781 CGCCATTTGAAAAAA CACTTGAAAG CAC CTTTCA-GTG GTATAAGTCTTATCG Ctha_1747 2079838 - 2080824 + | NAD-dependent epimerase/dehydratase TERM 2987 2080839 - 2080861 + F 100 -12.1 -5.42198 | AATCAGCTTGTTTGA GTCATAGCC AATGC GGCTATGAC TTTTATTTTTTACCC TERM 2988 2080965 - 2080940 - f 78 -3.4 -5.40072 | opp_overlap 2080940, overlap 2080949 CTCTGCTCAAAAAAA TCAAATTCAT CATTTT ATGAGTTTGA TTTATCCGGTTATTC TERM 2989 2081144 - 2081156 + F 70 -4.9 -4.57073 | AACGAGCTTTATTCT TCAAT TCT ATTGA TTTTTCAGAAGCGTA TERM 2990 2081270 - 2081300 + F 71 -3.8 -5.00616 | overlap 2081281 TCGGCTCAATCAGGG TTCAGCGCATTGGC GCA GGCTGCGCGCTGGA TTTTTTCAAGCAAAA TERM 2991 2081700 - 2081717 + G 83 -6.3 -5.00616 | gap 1, opp_overlap 2081697 ATGCTGATAGAATCC GAGC-CGA AAA TCGCGCTC TTTTTTGCCGCCGAG TERM 2992 2081920 - 2081901 - g 72 -4.9 -4.66163 | opp_overlap 2081912, overlap 2081902 2081911 2081912 2081914 ATTTCCATTCAAAAA GCCGCCA AAATCA TGGCGGA GCGCAATGTCGGTTC Ctha_1748 2081328 - 2083277 + | putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase Ctha_1749 2083274 - 2083963 + | DNA polymerase III, epsilon subunit Ctha_1750 2084135 - 2085373 + | GLUG domain protein TERM 2993 2085663 - 2085691 + G 79 -9.7 -3.72576 | gap 1, opp_overlap 2085655 2085668 2085671, overlap 2085668 2085690 AAGAAATCTTCAACG GGAAATCAGGCG AAAACG CGCC-GATTTCC TTTGATGGAAAAAGG Ctha_1751 2085533 - 2085784 + | hypothetical protein TERM 2994 2085841 - 2085808 - f 70 -9.1 -3.09492 | gap 1, opp_overlap 2085809 2085816, overlap 2085816 TTCGCAATTTCAATA GA-AAAAAAGGGGC GGAAAAA GCCCCTTTTTTGTC TGTCAGATTTGAAAA TERM 2995 2085816 - 2085832 + F 89 -6.5 -5.4251 | opp_overlap 2085808 2085816, overlap 2085809 TTCAATAGAAAAAAA GGGGC GGAAAAA GCCCC TTTTTTGTCTGTCAG TERM 2996 2085832 - 2085816 - f 100 -6.5 -5.80817 | opp_overlap 2085816 2085809, overlap 2085808 TTCAATAGAAAAAAA GGGGC GGAAAAA GCCCC TTTTTTGTCTGTCAG Ctha_1752 2086094 - 2086333 + | hypothetical protein TERM 2997 2086465 - 2086453 - g 71 -6.9 -4.10161 | opp_overlap 2086453, overlap 2086462 CAGCACCTTGGAAAA CCGGC CAA ACCGG TTGTTAAAGCGGGCC TERM 2998 2087238 - 2087250 + G 73 -7.7 -4.12198 | opp_overlap 2087233 2087238 GAACTTGAAAGTAAT CATCG GCA CGATG TTTTCCGACATTATC TERM 2999 2087494 - 2087533 + G 91 -8.6 -4.93365 | gap 1, opp_overlap 2087494 TTATTTACGAATTTA GCCCAGAGGC-GCGAGTTT GAT GAACTCCCTGCTTATGGGC TTTTTAATTGTACGG Ctha_1753 2086330 - 2087655 + | electron transport complex, RnfABCDGE type, C subunit Ctha_1754 2087677 - 2088648 + | electron transport complex, RnfABCDGE type, D subunit Ctha_1755 2088650 - 2089195 + | electron transport complex, RnfABCDGE type, G subunit Ctha_1756 2089192 - 2089791 + | electron transport complex, RnfABCDGE type, E subunit Ctha_1757 2089795 - 2090373 + | electron transport complex, RnfABCDGE type, A subunit TERM 3000 2090504 - 2090481 - g 79 -2.4 -5.52023 | ATGAGCAAGAAAAAA TTTTGATGGG AACG CTCTTCAAAA TCAAAGCTTATTACA Ctha_1758 2090381 - 2091400 + | ApbE family lipoprotein Ctha_1759 2091466 - 2091864 + | positive regulator of sigma E, RseC/MucC TERM 3001 2091936 - 2091953 + G 72 -5.7 -4.52589 | TTAGGGGTTATTATT CTTTTTA TTTC TAAAAAG TTTTATGTGGAAGAA TERM 3002 2092724 - 2092697 - g 80 -6.2 -4.85599 | GCCAGCTTATAAAAA CGCCGCTTCTGC GCCG GCAAAAGTGTCG GAAGAAGCTGAATCG Ctha_1760 2091867 - 2092757 + | electron transport complex, RnfABCDGE type, B subunit TERM 3003 2092823 - 2092798 - T 74 -8.9 -3.54543 | opp_overlap 2092798 ATCGATTTTTCCAAA GCGTCTGGAGG TGTT CCTTCAGGCGC TTTTCTATTCCTTGC TERM 3004 2092798 - 2092823 + T 100 -13.3 -4.73864 | opp_overlap 2092798 ATCGATTTTTCCAAA GCGTCTGGAGG TGTT CCTTCAGGCGC TTTTCTATTCCTTGC Ctha_1761 2094097 - 2092778 - | AAA ATPase central domain protein TERM 3005 2093297 - 2093272 - G 81 -5.3 -5.15969 | gap 1, overlap 2093274 TGGCAAGCCAAAAAA GAGCGGCGTCAG GAT CAGA-GCCGCGC AGAGACTTGATAAAG TERM 3006 2093295 - 2093274 - G 72 -6.5 -4.20888 | gap 1, overlap 2093272 GCAAGCCAAAAAAGA GCGGCGTCAG GAT CAGA-GCCGC GCAGAGACTTGATAA TERM 3007 2093331 - 2093341 + g 76 -2.4 -5.31275 | opp_overlap 2093330 GAAATGACATCATAG TGCG AAT CGCC TTTTTTGTCGTAGCG TERM 3008 2093360 - 2093376 + g 74 -3.7 -5.00616 | TTTGTCGTAGCGGAG CGCTT GCTGCTG AAGCG TTTTTTCCAGAAGCG Ctha_1762 2094428 - 2094135 - | hypothetical protein Ctha_1763 2094994 - 2094413 - | hypothetical protein TERM 3009 2095134 - 2095123 - g 75 -3 -5.10077 | AAAGATGTCAAAAAA TAGT GCGT ACTA AAGAGTTGCAATTCG TERM 3010 2095408 - 2095424 + G 71 -3.7 -4.89063 | opp_overlap 2095403 CCGATGAAGATCGCA TTTCGTG CAA CATGGAA TTTATTTTTACCTCA Ctha_1764 2095077 - 2096129 + | hypothetical protein Ctha_1765 2096149 - 2096970 + | NAD+ synthetase TERM 3011 2097038 - 2097013 - T 100 -14.9 -2.94258 | opp_overlap 2097013, overlap 2097008 2097015 2097017 2097019 AGCAATTTAAGCATA TAGAGACGCAA GATA TTGCGTCTCTA TTTTATTTGGAGTGA TERM 3012 2097013 - 2097038 + T 100 -14.9 -4.88918 | opp_overlap 2097008 2097013 2097015 2097017 2097019 AGCAATTTAAGCATA TAGAGACGCAA GATA TTGCGTCTCTA TTTTATTTGGAGTGA TERM 3013 2097036 - 2097015 - T 95 -13.1 -3.01984 | opp_overlap 2097013, overlap 2097013 2097008 2097017 2097019 CAATTTAAGCATATA GAGACGCAA GATA TTGCGTCTC TATTTTATTTGGAGT TERM 3014 2097034 - 2097017 - T 76 -9.9 -3.05914 | opp_overlap 2097013, overlap 2097015 2097013 2097008 2097019 ATTTAAGCATATAGA GACGCAA GATA TTGCGTC TCTATTTTATTTGGA Ctha_1766 2098055 - 2097075 - | rfaE bifunctional protein Ctha_1767 2099009 - 2098350 - | lipolytic protein G-D-S-L family TERM 3015 2098584 - 2098611 + g 88 -5.5 -5.61881 | overlap 2098585 TGGTGGCACTTGCAT GCCCGCAATGA TCATTT TCATAGCGGGA TTTTTCTTTTTCGCC TERM 3016 2098585 - 2098610 + g 77 -9 -3.95502 | overlap 2098584 GGTGGCACTTGCATG CCCGCAATGA TCATTT TCATAGCGGG ATTTTTCTTTTTCGC TERM 3017 2098890 - 2098916 + g 72 -6.6 -4.19704 | overlap 2098891 AGCGGTAATACTATT TCCGAAAAAAAG AAT CGTTTTTTCGGC TTTTGCCTGCGATTG TERM 3018 2098891 - 2098915 + g 70 -10.1 -3.11341 | overlap 2098890 GCGGTAATACTATTT CCGAAAAAAAG AAT CGTTTTTTCGG CTTTTGCCTGCGATT Ctha_1768 2099111 - 2099827 + | ABC transporter-related protein Ctha_1769 2099836 - 2102409 + | protein of unknown function DUF214 TERM 3019 2102528 - 2102545 + F 82 -8.5 -4.22948 | TACACAGCTTCTATT TTCTGCA TTTA TGCAGAA TTTTGACTACATTTT TERM 3020 2102975 - 2103024 + G 93 -14.6 -3.30474 | gap 1, opp_overlap 2102987 2102989 2102990 2103023, overlap 2102959 CATCGAAGGTTCGGT GGTTTTGCAAAAT-ACGCGTGGC ACAGC GCCAGGCATGATTTTGCAAAACC TTCCTAATTATGAAG TERM 3021 2103834 - 2103811 - g 72 -5.3 -4.67607 | opp_overlap 2103811 TGCTCAATAAAGAAA GATTTAGCG AGGCGG CGCTCAATC TTGTTAGGGAATTGT Ctha_1770 2102601 - 2103863 + | competence/damage-inducible protein CinA TERM 3022 2104090 - 2104124 + F 73 -4.3 -4.91852 | gap 1, overlap 2104092 AGTAAGGCTTTGTTG CCGCCATCGCTATGTG ATGC CAT-TAGCGATGGCTC TTTATTTTTAATCAG TERM 3023 2104092 - 2104122 + F 86 -11.3 -4.06997 | gap 1, overlap 2104090 TAAGGCTTTGTTGCC GCCATCGCTATGTG ATGC CAT-TAGCGATGGC TCTTTATTTTTAATC TERM 3024 2106058 - 2106048 - g 82 -6.8 -4.90477 | opp_overlap 2106048, overlap 2106049 TATAAAAAAGGAAAA TCGC TTA GCGA GGCCATGCGGATTAT Ctha_1771 2104173 - 2106260 + | putative metal dependent phosphohydrolase Ctha_1772 2106432 - 2108456 + | metal dependent phosphohydrolase TERM 3025 2109247 - 2109221 - g 74 -3.8 -4.94992 | gap 2, overlap 2109222 2109223 TGAAATCTACAAAAA GC-TCGT-CTCG GAATT CGAGCACGAAGC AAAAAGAACCGTGCT Ctha_1773 2108613 - 2109776 + | alanine racemase TERM 3026 2109788 - 2109820 + T 73 -10 -2.53581 | gap 1, opp_overlap 2109790 TTGAGTTGCGGAATT TATTAGGGCAAC-GC CCAA GCTGTTGCCCTAAAA TAACTTAAAGCTCTA TERM 3027 2109818 - 2109790 - T 89 -12.6 -2.52676 | gap 1, opp_overlap 2109788 GAGTTGCGGAATTTA TTAGGGCAAC-GC CCAA GCTGTTGCCCTAA AATAACTTAAAGCTC TERM 3028 2109846 - 2109830 - T 79 -8.7 -3.92716 | opp_overlap 2109830 2109829 2109834 CTAAAATAACTTAAA GCTCTAC GCA GCAGAGC GTATCTTTATGGCGC Ctha_1774 2110739 - 2109825 - | hypothetical protein TERM 3029 2110985 - 2110997 + H 78 -5.5 -5.06816 | GGTTGGCGTGAATGG TCGGC AAA GCTGA TTTTTCTTGCGCCAT TERM 3030 2111260 - 2111280 + G 71 -3.9 -4.75372 | GGGCTCATGGCAATT GTCTGCGCA TTT TTTGCGGAC TTTTTGGTCAATGAT Ctha_1775 2111110 - 2111901 + | Sec-independent protein translocase, TatC subunit TERM 3031 2112071 - 2112084 + G 82 -3.1 -5.54907 | opp_overlap 2112071 TTATAACGACATCAA TCACT TTCC GGTGA TTTTTCTTTTGTCGG TERM 3032 2112105 - 2112122 + G 71 -3.4 -4.78149 | gap 1 CTTTTGTCGGGATTT GC-CAGC ACGGG GCTGAGC TTTTTGAATTATCGC TERM 3033 2112585 - 2112563 - g 76 -4.7 -4.84017 | overlap 2112565 AACCTCCGATAAAAA GCCCGGCGA CGGCT TCGTCGTGC TGGACATGATCGGCA Ctha_1776 2111949 - 2112956 + | putative esterase TERM 3034 2113563 - 2113573 + G 80 -6.8 -4.67635 | TCGGTTCGGCGCTTC GGCA ATT TGCC TTTTATGATTTTGAC TERM 3035 2113624 - 2113607 - g 77 -3.4 -5.25656 | gap 1, overlap 2113609 AAAATGACGAAAAAA GCCG-TG CCGCT CATCGGC AAATCCGAGCTTGAG Ctha_1777 2112971 - 2114125 + | ATPase-like protein TERM 3036 2114663 - 2114687 + F 76 -2.8 -5.38249 | gap 1, opp_overlap 2114651, overlap 2114664 AAGGCTCTCGCTATC TGGC-GTGAAC AGAT GTTCTCCGCCG TTTTTTCTAATTAAT TERM 3037 2114852 - 2114869 + G 76 -4 -5.00616 | GGCTATCGAGCTGGC GCCGAC CTGCGA GCCGGC TTTTTTCAGCCGAGC Ctha_1778 2114772 - 2115734 + | Tetratricopeptide TPR_2 repeat protein TERM 3038 2115801 - 2115813 + F 79 -9.1 -4.00532 | TTATTAACTTTGACT TGCCC ATC GGGCA TTTCCTCTTTAACCG Ctha_1779 2115845 - 2116243 + | Glyoxalase/bleomycin resistance protein/dioxygenase TERM 3039 2116290 - 2116257 - T 100 -11.9 -5.41143 | opp_overlap 2116260 2116289, overlap 2116260 GAGTTTGTAAAAAAA GAAGAGCGCCTTTTT CCTG AAAAAGACGCTCTTT TTTGATTTCGCAAAA TERM 3040 2116287 - 2116260 - T 100 -13.6 -4.79949 | opp_overlap 2116260, overlap 2116257 TTTGTAAAAAAAGAA GAGCGCCTTTTT CCTG AAAAAGACGCTC TTTTTTGATTTCGCA TERM 3041 2116260 - 2116287 + T 100 -11.4 -5.37593 | opp_overlap 2116260 2116257 TTTGTAAAAAAAGAA GAGCGCCTTTTT CCTG AAAAAGACGCTC TTTTTTGATTTCGCA Ctha_1780 2118821 - 2116308 - | Vault protein inter-alpha-trypsin domain protein TERM 3042 2119076 - 2119100 + H 74 -7.9 -3.95073 | gap 1, opp_overlap 2119037, overlap 2119041 2119039 2119077 GCCGGCTGATGTGTA G-GGGCGAAC CTATGT GTTCGCCCTC TTTGTGCATCTCAGC TERM 3043 2119077 - 2119098 + H 85 -11.6 -3.56568 | opp_overlap 2119037, overlap 2119041 2119039 2119076 CCGGCTGATGTGTAG GGGCGAAC CTATGT GTTCGCCC TCTTTGTGCATCTCA Ctha_1781 2119695 - 2120141 + | hypothetical protein Ctha_1782 2120153 - 2120596 + | hypothetical protein TERM 3044 2121134 - 2121121 - g 70 -2.3 -5.0065 | opp_overlap 2121121 GACCCAGAAAGAAAA CCGCT ACTT AGCCG CTCTATTTCACCACG Ctha_1783 2120735 - 2121160 + | protein of unknown function UPF0054 TERM 3045 2121170 - 2121192 + F 71 -4.2 -4.71186 | overlap 2121181 AAATAAACGCCAATT CAGATTTTTA CCA TAAAAGGCTG TTTTGTGTTGATAAT Ctha_1784 2121292 - 2123373 + | hypothetical protein TERM 3046 2123460 - 2123420 - T 90 -11.3 -4.56597 | opp_overlap 2123413 GCGTTCTTTTAAAAA GTAGTCCTAAATGCGATTT CCA AAAGTGCGTTTAGGACTAC ATGATGATAGTTGAT Ctha_1785 2124317 - 2123475 - | Prephenate dehydratase TERM 3047 2123609 - 2123635 + g 73 -2.1 -5.10461 | opp_overlap 2123608 2123611, overlap 2123614 ACAAATACTCAAATG CAGCCTCGCGC GACGG GCGCGATTCTA TTTTTGTTAAATCAA TERM 3048 2123614 - 2123630 + g 79 -9.4 -4.18737 | opp_overlap 2123608 2123611, overlap 2123609 TACTCAAATGCAGCC TCGCGC GACGG GCGCGA TTCTATTTTTGTTAA TERM 3049 2124587 - 2124577 - g 73 -2.4 -5.22943 | ATTAAACGGAAAAAA GCGG CGA CCGA CCAAAAAAGAGGAAA TERM 3050 2124656 - 2124689 + G 73 -10.3 -3.01712 | gap 1 CACGCATGGGCGGCG GCGACCCGGACGGC AATCCGC GCC-TCCGGCTCGC TATTGAAAACGCGCG Ctha_1786 2124535 - 2125287 + | protein of unknown function DUF28 TERM 3051 2125660 - 2125644 - g 83 -2.2 -5.68023 | overlap 2125645 CGAGAAGTAAAAAAA TCGGTT GCTGG AACCGG CAATGCCTCAAAGGA Ctha_1787 2125317 - 2125877 + | crossover junction endodeoxyribonuclease RuvC Ctha_1788 2126018 - 2126497 + | TspO and MBR like protein TERM 3052 2126564 - 2126576 + G 72 -10.5 -2.91276 | overlap 2126563 AAAAAATACTTGTGA CCGGC GGC GCCGG CTTTATCGGCAGCAA Ctha_1789 2126545 - 2127561 + | dTDP-glucose 4,6-dehydratase Ctha_1790 2127595 - 2128914 + | nucleotide sugar dehydrogenase TERM 3053 2128966 - 2128938 - T 76 -10.4 -2.56864 | opp_overlap 2128943, overlap 2128936 2128943 CGTATAAGCAAAACT TAAAATCCGGGT TTTTG ACCCGGATTTTT TATTAAAAATCGACT TERM 3054 2128961 - 2128943 - T 89 -10.3 -4.4518 | opp_overlap 2128943, overlap 2128938 2128936 AAGCAAAACTTAAAA TCCGGGT TTTTG ACCCGGA TTTTTTATTAAAAAT TERM 3055 2128943 - 2128961 + T 100 -11 -5.45652 | opp_overlap 2128943 2128938 2128936 AAGCAAAACTTAAAA TCCGGGTT TTT GACCCGGA TTTTTTATTAAAAAT Ctha_1791 2129265 - 2128969 - | hypothetical protein TERM 3056 2129206 - 2129196 - G 76 -8.2 -4.07568 | overlap 2129197 GCGCGTCTCTCAAAA CGCC GTA GGCG GCAACAGGTTTGAAA Ctha_1792 2129366 - 2129923 + | CDP-alcohol phosphatidyltransferase Ctha_1793 2130670 - 2129924 - | Nucleotidyl transferase Ctha_1794 2131172 - 2130762 - | aspartate 1-decarboxylase Ctha_1795 2131818 - 2131261 - | protein of unknown function DUF1239 TERM 3057 2131613 - 2131646 + g 77 -11.9 -2.78679 | opp_overlap 2131605, overlap 2131605 2131612 TCCAAATTGCGCCGC CGATATTGCGCACTA TGTT TAATGTGCAATATCG CTTTCACTCGACCCG TERM 3058 2131831 - 2131859 + r 78 -10.4 -3.05596 | opp_overlap 2131830 2131829 CATTGCGAAAAAGCT TCGCCCGATT GCAAAAAAA AATCGGGCGA TTGGATAAGCAGGTG Ctha_1796 2132438 - 2131878 - | outer membrane chaperone Skp (OmpH) TERM 3059 2131971 - 2131985 + g 76 -4.2 -5.06103 | opp_overlap 2131938 GCTTTTGTCGAGCAC CATGGT GTA GCCGTG TTTTTTGGCGGTTCT TERM 3060 2132236 - 2132248 + g 72 -5.5 -4.43859 | GAAAATTCAACTTCC CAGCG CTG TGCTG TTTTCTGAAGTTCTG TERM 3061 2132386 - 2132370 - G 73 -4.4 -4.8622 | TCCGGCAAGCAAAAA CAAGCC GAGAA AGCTTG CAACAAAAGTTCCTT TERM 3062 2132535 - 2132513 - R 80 -2.8 -5.54079 | overlap 2132506 TCAAAAACGAAAAAA TTATTCTG TTGCGTC CAGAACAA CTTTTCCTGTAACGA Ctha_1797 2133067 - 2132513 - | outer membrane chaperone Skp (OmpH) TERM 3063 2132961 - 2132979 + g 79 -4.6 -5.14563 | GCCGCCATAATTTTG TCGGAT TCAACAT ATCCGA TTTTTTGCTGAGCAA Ctha_1798 2133935 - 2133318 - | protein of unknown function DUF151 Ctha_1799 2135109 - 2134126 - | Electron transfer flavoprotein alpha subunit Ctha_1800 2135924 - 2135178 - | Electron transfer flavoprotein alpha/beta-subunit Ctha_1801 2136868 - 2136011 - | Ion transport protein TERM 3064 2136409 - 2136392 - G 81 -3.3 -5.35815 | TACAGTAAACAAAAA CACCGTA ATTT TTCGGCG ACTTGCGCTTAACGC TERM 3065 2136528 - 2136518 - G 91 -2.4 -5.89827 | opp_overlap 2136524 AATCACCAAAAAAAA CTGG CTG CCTG GTAAAATCAGGCTTA TERM 3066 2137751 - 2137770 + G 80 -7.1 -4.67234 | CTTTCATGAGTGCGC CGCCGGA TATTTC TCCGGTG TTTTTGCAATTAGAT Ctha_1802 2137090 - 2138391 + | Xanthine/uracil/vitamin C permease Ctha_1803 2139373 - 2138675 - | ABC transporter-related protein TERM 3067 2138933 - 2138953 + g 74 -5.4 -4.66388 | gap 1, overlap 2138934 TACACGCTGCTGCTG TCCGC-CAG AAAG CTGCGCGGG TTTGTTTGTCATTTT TERM 3068 2139517 - 2139527 + H 71 -6.8 -4.06055 | ATTCAAAAGCTCTCG CGCA CGA TGCG TTTCATTTAACCCAT TERM 3069 2139705 - 2139730 + G 70 -4.7 -4.55295 | gap 1, overlap 2139703 2139706 2139711 AACGCGATGTTGAGG CCGATATTGGCC TTT GGCCGAT-TCGA TTTGTTTCTACCGAC Ctha_1804 2139557 - 2140285 + | protein of unknown function DUF541 Ctha_1805 2141214 - 2140354 - | hypothetical protein TERM 3070 2140851 - 2140862 + g 100 -3.6 -5.93809 | AGCGATCCAGCAAAA CGGC AAGC GTCG TTTTTTTTATCGCGC TERM 3071 2141083 - 2141072 - G 100 -3.6 -5.93252 | overlap 2141082 TTGAAAAAGAAAAAA GCCG GAAG CAGC CAAAAAAACTTTAGC TERM 3072 2141103 - 2141117 + g 80 -5.7 -5.03314 | overlap 2141116 AAAACTTTAGCCCCG CGAAG ATTTC CTTCG TTTTTTCAACGTCAA Ctha_1806 2142142 - 2141198 - | glycosyl transferase family 2 TERM 3073 2142079 - 2142098 + g 72 -5 -4.58213 | overlap 2142081 GCGTGGCGCGAATTT TTTCAAGC AGCG GCTTGACA TTTTCTGCTTCGTTA Ctha_1807 2143022 - 2142213 - | DNA/RNA non-specific endonuclease TERM 3074 2142669 - 2142682 + g 89 -5.9 -5.67967 | opp_overlap 2142665, overlap 2142665 AGGGGCTAAATGGCC GCGGT CGTA GCCGC TTTTTTTATAATCAT TERM 3075 2142734 - 2142754 + g 70 -9.7 -2.96249 | overlap 2142730 GGATAGACGGGTCTT CGCGGAAAG CGT CTTTGCGCG TGATTGTTCCTAACG TERM 3076 2143090 - 2143106 + r 100 -9.4 -5.40072 | opp_overlap 2143090 CGGTGTAAAAAAAAA GCCGCT TACTT AGCGGC TTTTTTTGCAGAGAC TERM 3077 2143106 - 2143090 - R 100 -9.4 -6.06723 | opp_overlap 2143090 CGGTGTAAAAAAAAA GCCGCT TACTT AGCGGC TTTTTTTGCAGAGAC Ctha_1808 2143919 - 2143131 - | hypothetical protein TERM 3078 2143434 - 2143463 + g 70 -5.2 -4.40561 | gap 1, overlap 2143452 TTTGAGCGGAGCTTT GTTTTTG-CTTGT CCATT GCAAGTCAAAAAC TTGTTTTTCAACAGC TERM 3079 2143922 - 2143937 + r 75 -3.4 -5.31855 | TTACTGGTGTCATGG TTTTTA AGAT TAAAAA TTTTTGTTGTTGATA TERM 3080 2144001 - 2144015 + r 76 -5 -5.03314 | CTTGCGCGTACATCG TGACTA TCT TGGTCA TTTTTTCACAGTCAA TERM 3081 2144167 - 2144179 + r 74 -4.9 -5.00884 | opp_overlap 2144178 TTATAAATTCTGCAT GATTT GAA AAATC TTTTTTAAAAGAACT Ctha_1809 2145637 - 2144207 - | glutamyl-tRNA(Gln) amidotransferase, B subunit TERM 3082 2145204 - 2145193 - G 71 -7.2 -4.12456 | opp_overlap 2145192, overlap 2145181 AGACGATTTCCAAAA GCGG CACA CCGC ATCGGTTGGCATCGA TERM 3083 2145676 - 2145666 - R 79 -6.8 -4.72272 | TGGTTTCAGCAAAAA TCGG AAA CCGA AAATATAAAAAAGTT TERM 3084 2145707 - 2145735 + r 78 -5.4 -5.08824 | TTTCCCATCGTGCTA TTGCTTCATTCT GCCAA AGAGTAAAGCAA TTTTTTCGATAGAAA TERM 3085 2145762 - 2145789 + r 75 -6.4 -4.36914 | gap 1, opp_overlap 2145762 GAAAGATACAAAAAA GGCATTGAAAGAT TCT AACTT-CAATGCC TTTTATCGAAACAAA TERM 3086 2145789 - 2145762 - R 90 -6.4 -5.51046 | gap 1, opp_overlap 2145762 GAAAGATACAAAAAA GGCATTGAAAGAT TCT AACTT-CAATGCC TTTTATCGAAACAAA Ctha_1810 2147141 - 2145816 - | AAA ATPase central domain protein TERM 3087 2146416 - 2146427 + g 77 -3.6 -5.10163 | TTGGGCAATATCGAG CGCG GCAA TGCG TTTTGTTTTCAAGTT Ctha_1811 2147642 - 2147199 - | DoxX family protein TERM 3088 2147650 - 2147662 + r 75 -3.4 -5.1861 | GTTTCCATGAGATCG TTCC TGTTT GGAA TTTTTTACTCATAAA TERM 3089 2147703 - 2147681 - R 100 -9.9 -5.28176 | opp_overlap 2147681 TTTACTCATAAAAAA CGCGAACTC ATAGA AAGTTCGCG TTGATAAGAAAATGT TERM 3090 2147681 - 2147703 + r 74 -9.2 -3.14683 | opp_overlap 2147681 TTTACTCATAAAAAA CGCGAACT CATAGAA AGTTCGCG TTGATAAGAAAATGT Ctha_1812 2148908 - 2147772 - | Mannose-1-phosphate guanylyltransferase (GDP) Ctha_1813 2149899 - 2148928 - | Tetratricopeptide TPR_2 repeat protein TERM 3091 2149143 - 2149153 + g 74 -5.4 -4.67353 | overlap 2149126 GAAGAAATTCCTCAA TAGC TTC GCTA TTTTTGCCTAACTGC TERM 3092 2149649 - 2149636 - G 82 -3.1 -5.54907 | GCCAGAAAAGAAAAA CGCTT TGCC AAACG AATTTTGAAAAGTAG Ctha_1814 2150052 - 2150705 + | methyltransferase GidB TERM 3093 2150839 - 2150794 - T 87 -10.7 -4.22948 | gap 1, opp_overlap 2150793 2150789 2150795 2150831, overlap 2150795 AAAAGTGAGTCAAAA TTTTCACCGGAGACA-TTGC GTTGTTG GCAAATATCTCCGGTGAAAT CGTTTGTTCTCGTTT TERM 3094 2150838 - 2150795 - T 95 -14.2 -3.12684 | gap 1, opp_overlap 2150793 2150789 2150795 2150831, overlap 2150794 AAAGTGAGTCAAAAT TTTCACCGGAGACA-TTGC GTTGTTG GCAAATATCTCCGGTGAAA TCGTTTGTTCTCGTT TERM 3095 2150795 - 2150838 + T 87 -12 -3.16682 | gap 1, opp_overlap 2150795 2150794, overlap 2150793 2150789 2150831 AAAGTGAGTCAAAAT TTTCACCGGAGACA-TTGC GTTGTTG GCAAATATCTCCGGTGAAA TCGTTTGTTCTCGTT Ctha_1815 2151794 - 2150853 - | band 7 protein TERM 3096 2151361 - 2151385 + g 72 -8.6 -3.72051 | overlap 2151346 GCGGCTTCGTCAATT GCCGAAACCA CTTGT TGGTTTAGGC TTTCGCGTTCTTCAA Ctha_1816 2152265 - 2151804 - | protein of unknown function DUF107 Ctha_1817 2155294 - 2152475 - | cyclic nucleotide-binding protein TERM 3097 2152964 - 2152940 - G 74 -5.5 -4.56597 | overlap 2152941 GCCGGCGGTCAAAAA TGCCAGCTCGC CGA GCGTGCTGCCG GGACCGAGAATGTCC TERM 3098 2152963 - 2152941 - G 70 -9 -3.33744 | overlap 2152940 CCGGCGGTCAAAAAT GCCAGCTCGC CGA GCGTGCTGCC GGGACCGAGAATGTC TERM 3099 2153354 - 2153374 + g 73 -2.5 -5.14563 | overlap 2153353 AATGGCCATGGTGAT TTCAGGGAA AGT TTCCCGCAA TTTTTTAATCGCGCC TERM 3100 2154576 - 2154562 - G 74 -5.6 -4.59773 | overlap 2154548 2154563 GCGCATCGTTAAAAA CGTGGC GGA GCCACC AAATGGTTAGGCCTG TERM 3101 2154575 - 2154563 - G 70 -9.1 -3.35542 | overlap 2154548 2154562 CGCATCGTTAAAAAC GTGGC GGA GCCAC CAAATGGTTAGGCCT TERM 3102 2155556 - 2155516 - H 72 -5.1 -4.83169 | gap 2, opp_overlap 2155516 2155533 ATGTCTTTAGAAAAA TCATCCTTAC--ATTGTTC TTGTT AAACAATTTGTAAGGATGA TTTCAATATACATTG Ctha_1818 2155608 - 2156348 + | short-chain dehydrogenase/reductase SDR TERM 3103 2156411 - 2156391 - T 78 -9.8 -3.28416 | CATGAGCGATACGAA GATGAAGC ACCGA GCTTCATC CTCGCGCTGATAAAA Ctha_1819 2157344 - 2156451 - | hypothetical protein Ctha_1820 2157569 - 2158378 + | hypothetical protein Ctha_1821 2158894 - 2158394 - | hypothetical protein TERM 3104 2159005 - 2158988 - H 75 -8.5 -3.84901 | CTCATGAAAAACCAA GCGAAAA GGAT TTTTCGC CATTGAATATACGTT TERM 3105 2159284 - 2159270 - H 75 -2.2 -5.36441 | TCCCGATATAAAAAA TTAAAC AGA ATTTAA TCAAGACTGGCTTTA TERM 3106 2159431 - 2159396 - H 72 -7.6 -3.84985 | gap 1, overlap 2159401 2159427 CAGGAAAAGACAGAA CAGCAGCATTTCTGACA ATG TGTCAGACAAGC-GCCG AATAGGCAATGCGAA TERM 3107 2159925 - 2159937 + G 78 -5.5 -4.84311 | TTTTGGGAAAGCTTT CTCAG CAG CTGGG TTTTGTTCTATCGCC Ctha_1822 2159546 - 2160619 + | heat-inducible transcription repressor HrcA TERM 3108 2160927 - 2160910 - g 85 -3.3 -5.47159 | opp_overlap 2160925, overlap 2160915 CTCAAGAAACAAAAA GAACGCG AAGT CGCCTCC GTACGCAAATTTGCG Ctha_1823 2160658 - 2161275 + | GrpE protein TERM 3109 2162220 - 2162206 - g 74 -5.7 -4.61873 | opp_overlap 2162205, overlap 2162210 CTCTATAAACTAAAA GTCAG TTATC CTGAC ATGGTGTTAGGAACA Ctha_1824 2161330 - 2162529 + | chaperone protein DnaJ TERM 3110 2162549 - 2162593 + F 73 -2.9 -5.27335 | overlap 2162550 2162551 2162553 CGCAACCAACCTTTT TTCATCTCTCTTTGTGGCG CCGGTTT TGTTGCAAAGAGAGATGCC TTTTTATTTCCACGA TERM 3111 2162551 - 2162591 + F 74 -9.9 -2.84684 | overlap 2162550 2162549 2162553 CAACCAACCTTTTTT CATCTCTCTTTGTGGCG CCGGTTT TGTTGCAAAGAGAGATG CCTTTTTATTTCCAC Ctha_1825 2162882 - 2163166 + | hydrogenase assembly chaperone hypC/hupF TERM 3112 2163655 - 2163631 - g 77 -3.6 -5.15969 | gap 1, opp_overlap 2163631 2163635, overlap 2163634 2163635 TTTCAAGCCAAAAAA GAAGGGCTGAA AAAT TTCAGCC-TGC TTGTGAGCCATGTGC TERM 3113 2163653 - 2163634 - g 78 -6.4 -4.67173 | opp_overlap 2163631 2163635, overlap 2163631 2163635 CAAGCCAAAAAAGAA GGGCTGAA AAAT TTCAGCCT GCTTGTGAGCCATGT TERM 3114 2163652 - 2163635 - g 73 -9.9 -3.38677 | opp_overlap 2163631 2163635, overlap 2163634 2163631 AAGCCAAAAAAGAAG GGCTGAA AAAT TTCAGCC TGCTTGTGAGCCATG Ctha_1826 2163163 - 2164260 + | hydrogenase expression/formation protein HypD TERM 3115 2164327 - 2164346 + T 72 -9.3 -2.7693 | overlap 2164326 AGTTGATTTTGTAGG GGCGAAC CTGTAT GTTCGCC ATGTTTCATTTGCGA Ctha_1827 2165405 - 2164407 - | hypothetical protein TERM 3116 2164549 - 2164536 - G 76 -5.3 -4.86621 | overlap 2164541 AGCGCCAATTAAAAA TAACG TTAC CGTTA GGCAAGATTTGGCTG TERM 3117 2164915 - 2164941 + g 74 -10.8 -3.21593 | opp_overlap 2164889 2164890 2164913 2164914, overlap 2164920 2164923 TTTAGGATAAACACC GTGCCAAGCGCC ACA GACGTTTGGCGC TCTTCTGCCCCGATG TERM 3118 2165326 - 2165312 - G 73 -4.3 -4.84359 | opp_overlap 2165321 CCATCCCTACAAAAA CGATT TCGCG AATCG TGACGCTTCTTTCCA TERM 3119 2166153 - 2166117 - H 72 -7.7 -3.72775 | opp_overlap 2166115 2166115, overlap 2166115 ATTCATGAATAAATA TTTTTAATAATTTTTTT GAT AAAAAAACTATGAAAAA GATTGCTTTTTATGG Ctha_1828 2166146 - 2166970 + | nitrogenase iron protein Ctha_1829 2166995 - 2167312 + | nitrogen regulatory protein P-II Ctha_1830 2167325 - 2167690 + | nitrogen regulatory protein P-II TERM 3120 2167681 - 2167670 - f 72 -7.2 -3.94003 | AGGACAAACGAAGAA GGCG ATAG CGCC ATCAAGTGAGGAAAC Ctha_1831 2167725 - 2169269 + | nitrogenase alpha chain TERM 3121 2169360 - 2169350 - g 87 -6.8 -5.1861 | opp_overlap 2169349 2169350 TTCATCATGAAAAAA TGCC TTT GGCA GTTTCATTCCCGCGC Ctha_1832 2169287 - 2169643 + | Fe-only nitrogenase, delta subunit TERM 3122 2170653 - 2170636 - g 77 -3.3 -5.24129 | CTCGCCGATAAAAAA GTGGCCA TTTA CGGCAAC CCCGATCTGGTGCTT Ctha_1833 2169691 - 2171079 + | Fe-only nitrogenase, beta subunit TERM 3123 2171138 - 2171169 + F 84 -8.7 -4.39696 | gap 1, opp_overlap 2171134 2171138 TAGCCAAAAAATCCA CTGCCGGATTGCAG CACTT CAGCG-TCCGGCAG TTTGTTCGTTTGCCA TERM 3124 2171619 - 2171608 - g 76 -2.2 -5.28778 | opp_overlap 2171611 2171612 ATGAGGCAGAAAAAA CAAG CGCG CTCG ATTTGATTGTGGCGC Ctha_1834 2171280 - 2171738 + | putative nitroimidazole resistance protein TERM 3125 2171817 - 2171829 + G 71 -3.4 -4.87665 | TTGTGGATAAGGCGG GGAA TGCGC TTCC TTTTTATGAATCAGG Ctha_1835 2171786 - 2172421 + | Fe-only nitrogenase accessory protein AnfO TERM 3126 2172948 - 2172992 + G 100 -19.5 -3.41878 | opp_overlap 2172952 2172953, overlap 2172952 2172955 CATCGATGCCGAGCT GAAATCGGCACATCTGGAAGC TCA GCTTCCAGATGTGCTCATTGC TTCTGAATTGGACAC TERM 3127 2172952 - 2172988 + G 100 -18.9 -3.47403 | opp_overlap 2172952 2172953, overlap 2172948 2172955 GATGCCGAGCTGAAA TCGGCACATCTGGAAGC TCA GCTTCCAGATGTGCTCA TTGCTTCTGAATTGG TERM 3128 2172988 - 2172952 - g 100 -16.7 -3.60296 | opp_overlap 2172948 2172952 2172955, overlap 2172953 GATGCCGAGCTGAAA TCGGCACATCTGGAAGC TCA GCTTCCAGATGTGCTCA TTGCTTCTGAATTGG TERM 3129 2172988 - 2172953 - g 100 -17.8 -2.75963 | gap 1, opp_overlap 2172952 2172948 2172955, overlap 2172952 ATGCCGAGCTGAAAT CG-GCACATCTGGAAGC TCA GCTTCCAGATGTGCTCA TTGCTTCTGAATTGG TERM 3130 2172955 - 2172985 + G 100 -22.8 -2.87541 | opp_overlap 2172952 2172953, overlap 2172952 2172948 GCCGAGCTGAAATCG GCACATCTGGAAGC TCA GCTTCCAGATGTGC TCATTGCTTCTGAAT TERM 3131 2173141 - 2173160 + G 71 -7.8 -3.95219 | gap 1, opp_overlap 2173131, overlap 2173143 AATATTGGCATTCTT GC-CGCCGG CTA CTGGCGTGC TTTATACGATTTAAC TERM 3132 2173540 - 2173526 - g 72 -5 -4.57569 | TTATGTTTGTAAAAA CTTCAA AAC TCGAAG ACTGCAAGCCGCTTG TERM 3133 2173630 - 2173641 + G 71 -3.6 -4.89063 | GCTGAAGATATCCAT TGGC AAAA GCCG TTTCTTTTTCCGTCC Ctha_1836 2172685 - 2173749 + | hypothetical protein TERM 3134 2174296 - 2174286 - g 70 -2.4 -5.0538 | opp_overlap 2174294, overlap 2174288 TTGCACGGGAAAAAA GTGC TGG GCGC AATCAGCGTGGTGCG Ctha_1837 2173842 - 2175431 + | transcriptional regulator, NifA subfamily, Fis Family TERM 3135 2176036 - 2176003 - g 72 -8.1 -3.6715 | TGATTGAAGGCGAAA GCAAACGACGAGAAA TTCA CTACACGCCGTTTGC AAGGGACGAAATTGT TERM 3136 2176084 - 2176073 - g 70 -2.2 -5.07053 | AAGCAGCGCAAAAAA TCCG TTGG CGAA AAAAGATGAACTCAA Ctha_1838 2175555 - 2176448 + | transcriptional regulator, LysR family TERM 3137 2176875 - 2176901 + G 74 -5.9 -4.56597 | gap 1, opp_overlap 2176869 2176867 2176866 2176874, overlap 2176880 AGAAGATCAGGCAAC GCTGGCTTTGCC CGCC GGCAAAG-TGGC TTTTTCAACCGACAC Ctha_1839 2176741 - 2177760 + | hydrogenase expression/formation protein HypE Ctha_1840 2178764 - 2177763 - | hypothetical protein TERM 3138 2178582 - 2178604 + g 72 -2.6 -4.93547 | TTCTATAATGTGTTT CGGCGTAAAT TTG GTTGGCGTCG TTTTTGATTCCTTAA Ctha_1841 2179546 - 2178863 - | non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family TERM 3139 2178897 - 2178910 + g 79 -8.1 -4.28548 | opp_overlap 2178895 2178897 GTAAGAAATTTAACA GCGGT TTGA ACCGC TTTTCCTCGATGACT Ctha_1842 2180348 - 2179638 - | pyridoxal phosphate biosynthetic protein PdxJ TERM 3140 2179830 - 2179855 + g 79 -7.7 -4.42464 | gap 1, opp_overlap 2179821, overlap 2179836 AAGCGACGCCGCATC TTGCAAGCGGAG AAG TTCCGCTT-CAA TTTCTTTCGGCGATT TERM 3141 2181137 - 2181124 - g 76 -5.3 -4.87291 | GATTCCAATGAAAAA CATCT GCGA AGATG AAGCGGCCTGCGAAC Ctha_1843 2180705 - 2181286 + | protein of unknown function DUF177 Ctha_1844 2181289 - 2181480 + | ribosomal protein L32 TERM 3142 2182479 - 2182490 + G 74 -7.2 -4.24204 | overlap 2182488 ACGATGAACAATTTG GCGG CGTA CCGC TTTTGGGTGTCAATG Ctha_1845 2181608 - 2182630 + | fatty acid/phospholipid synthesis protein PlsX TERM 3143 2182654 - 2182688 + T 78 -11 -2.83522 | gap 1, opp_overlap 2182662, overlap 2182662 TTTTTCAAAGATTTA GCTAAAAAGTCTCTG CTTAGT CAGAGACTTTTT-GC GTTTACTGAAACGAT TERM 3144 2182681 - 2182662 - T 83 -7.9 -4.67755 | opp_overlap 2182654 2182662 AGATTTAGCTAAAAA GTCTCTG CTTAGT CAGAGAC TTTTTGCGTTTACTG TERM 3145 2182662 - 2182681 + T 84 -7.9 -4.82855 | opp_overlap 2182662, overlap 2182654 AGATTTAGCTAAAAA GTCTCTG CTTAGT CAGAGAC TTTTTGCGTTTACTG TERM 3146 2182751 - 2182778 + T 84 -6.3 -5.32944 | opp_overlap 2182751 GTTTAACACAAAAAA GCCTGATAACT GGCTGA GGCTATCAGGC TTTTTTCATTGTCAA TERM 3147 2182778 - 2182751 - T 100 -7.8 -5.47159 | opp_overlap 2182751 GTTTAACACAAAAAA GCCTGATAAC TGGCTGAG GCTATCAGGC TTTTTTCATTGTCAA Ctha_1846 2183732 - 2182818 - | Polysulphide reductase NrfD TERM 3148 2182889 - 2182872 - G 74 -3.3 -4.93547 | GTAACGAAGCAAAAA CCCGCCC AAAA GAACGAG CAAACTGGCGGTTAT TERM 3149 2183029 - 2183010 - G 71 -3.5 -4.87626 | overlap 2183025 GCCGAAGACGAAAAA CGGCGTT TCAAAC AACTCCG CCGCCGAAGCTCTTG TERM 3150 2183243 - 2183231 - G 76 -4.7 -4.76123 | opp_overlap 2183231, overlap 2183232 AAATCACGAACAAAA GCGGC AAC GCCGG TGTGTTCCAAAAAGA Ctha_1847 2184347 - 2183748 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 3151 2184218 - 2184185 - G 76 -8.1 -4.11773 | opp_overlap 2184209 2184210 2184211 AAAGACGGGGCAAAA GCTCGCGGCGAACAT TCGG ATATTCACCGTGTGC GCTGTCTTCGACATG Ctha_1848 2187176 - 2184351 - | molybdopterin oxidoreductase TERM 3152 2185248 - 2185258 + g 72 -8.2 -3.72695 | overlap 2185247 GCAGAAAATATCCGC CGCG TCG CGCG TTTCATAAAGCGGGT TERM 3153 2186240 - 2186256 + g 72 -2.9 -4.98255 | GTCCCATGTCGGCAG CGAGTTG AAC CAATCCG TTTTTATCCTTGAAG TERM 3154 2186422 - 2186454 + g 89 -4.2 -5.78622 | gap 2, opp_overlap 2186441 GACGCCAGCTCACTT TGGCGC--GGGTCG AGGCAAA CGACCTTGGCGCCA TTTTTTTTCGCCTGA TERM 3155 2186877 - 2186908 + g 79 -9.4 -4.09739 | gap 1 GTCGGGGTCGTAGGT TTGGCGCAAGCCGGC TTG GCC-GCGTGCGCAAA TTTTGCCACGATTGA TERM 3156 2187260 - 2187248 - H 72 -7.7 -3.82528 | overlap 2187256 AATGCGAAAAACGAA GCCAA TAA TTGGC AGCCAAAATAAGATG TERM 3157 2187272 - 2187297 + H 83 -5.5 -5.40072 | opp_overlap 2187272 TGGCAGCCAAAATAA GATGCTTTATT GATA AATGCAGCATC TTTTTTTGGAAAACA TERM 3158 2187924 - 2187878 - g 74 -10.3 -3.27525 | gap 2, overlap 2187915 CGCCCGTAAAGGCAA TCGCCCGAG-TT-TTCTGGAGGC GGC GCGTCCCGAACAAGCTCAGGCGA GCTATCAGGATTTTG Ctha_1849 2187612 - 2188070 + | D-tyrosyl-tRNA(Tyr) deacylase TERM 3159 2188196 - 2188184 - g 78 -4.8 -5.06451 | GAGCAGGCCAAAAAA TCGC GTTTG GCGA GCGACGTGCTGCTGG TERM 3160 2188438 - 2188417 - g 70 -5.1 -4.55287 | opp_overlap 2188417, overlap 2188419 GCCATTTATAGAAAA TGCGGCG TTGCCGTG CGCCACA TTGATTCAGCCGATC TERM 3161 2188791 - 2188781 - g 80 -6.8 -4.67038 | CTGGCAAAAGTAAAA GCCA TTT TGGC GAAAAAACTAAAGTA Ctha_1850 2188067 - 2188807 + | 3-deoxy-D-manno-octulosonate cytidylyltransferase Ctha_1851 2188922 - 2189401 + | Endoribonuclease L-PSP Ctha_1852 2189909 - 2189406 - | protein of unknown function DUF192 TERM 3162 2189521 - 2189510 - G 79 -3 -5.44721 | opp_overlap 2189510 ACGATTTGAAAAAAA TTGT ATCC ACAA TCGGTTCCATGTGGT TERM 3163 2189982 - 2189970 - R 79 -9.1 -4.08064 | opp_overlap 2189969 AACGGCGCGCTAAAA CGACG ATT CGTCG GTGCTATCAAACGCG Ctha_1853 2190740 - 2189964 - | hypothetical protein TERM 3164 2190398 - 2190375 - G 77 -3.8 -5.10461 | opp_overlap 2190375 2190374, overlap 2190377 GCGATGCAATAAAAA TTGCCCGTGA TATT TCACGGCTAA ATTTTCATTAAAGGC Ctha_1854 2191649 - 2191011 - | Methyltransferase type 12 TERM 3165 2193064 - 2193054 - g 80 -5.4 -5.04385 | GAGATTGCGAAAAAA TCCT ACA AGGA GCAGCGTCCGGTGTT Ctha_1855 2191785 - 2193173 + | fumarate lyase TERM 3166 2193204 - 2193224 + T 100 -11.9 -5.88565 | opp_overlap 2193204 TAAGCTAAAAAAAAA GGTTGTCCT GGA AGGGCAACC TTTTTTTGTTGTGAG TERM 3167 2193224 - 2193204 - T 100 -9.7 -6.15259 | opp_overlap 2193204 TAAGCTAAAAAAAAA GGTTGTCCT GGA AGGGCAACC TTTTTTTGTTGTGAG Ctha_1856 2195149 - 2193263 - | ABC transporter-related protein Ctha_1857 2195326 - 2196567 + | metal dependent phosphohydrolase Ctha_1858 2196644 - 2197144 + | putative phosphohistidine phosphatase, SixA TERM 3168 2197157 - 2197175 + F 74 -5.3 -4.82901 | TAATTAACCGCCCTT TTTTGGG ACAAG CCCAGAA TTTTTATGCAAGAGG TERM 3169 2197583 - 2197598 + G 73 -2.4 -5.1356 | CAAGAAAATGTGCGT CCGCTG TTAG CGCCGG TTTTTCTTCATCGCC Ctha_1859 2197181 - 2199250 + | Polyphosphate kinase TERM 3170 2199312 - 2199286 - T 100 -12.4 -5.38497 | opp_overlap 2199286 2199309 ATGGAAACGAAAAAA GGGAAACTGATA ATT TTTCAGTTTCCC TTTTTATTTGAATGA TERM 3171 2199286 - 2199312 + T 100 -12.4 -5.30616 | opp_overlap 2199286, overlap 2199309 ATGGAAACGAAAAAA GGGAAACTGATA ATT TTTCAGTTTCCC TTTTTATTTGAATGA Ctha_1860 2199855 - 2199340 - | Ferroxidase TERM 3172 2200047 - 2200070 + r 91 -9.7 -4.7497 | opp_overlap 2200047 ACTCGAATAAAAAAA GCAATCTAC ATGAAA GTAGATTGC TTTTTGGTGCATCCG TERM 3173 2200070 - 2200047 - R 100 -9.7 -5.80364 | opp_overlap 2200047 ACTCGAATAAAAAAA GCAATCTAC ATGAAA GTAGATTGC TTTTTGGTGCATCCG Ctha_1861 2200520 - 2200158 - | preprotein translocase, SecG subunit TERM 3174 2200777 - 2200767 - g 72 -5.4 -4.4267 | opp_overlap 2200767 TTTCAAAATTGAAAA GGAA AAT TTCC GATTTTATTTTCCAC Ctha_1862 2200618 - 2200863 + | hypothetical protein TERM 3175 2200980 - 2200949 - g 83 -13.8 -2.72094 | overlap 2200946 AACGAAGGAAACGGA CATTGCCATCGAGC TGGT GCTTGACGGCAATG GAAAATATGAGATTC TERM 3176 2201216 - 2201248 + G 74 -3.4 -5.04249 | gap 1, opp_overlap 2201204, overlap 2201212 2201218 2201218 GGACGAGTCTTTGGC TCG-TGCGGCCATTG ATCT CAGTGGCCGAAGCTA TTTATTTTTTGACGC Ctha_1863 2200902 - 2201486 + | Imidazoleglycerol-phosphate dehydratase TERM 3177 2201512 - 2201549 + F 71 -8.5 -3.52073 | opp_overlap 2201512 2201534 2201535 TGACTTTTTCAGAAA GGCAACGGGATTTTC AGCGAAAC GAGAAGCTCGTTGCC TTCTCCTCTTCCAAA TERM 3178 2201952 - 2201940 - g 72 -6.3 -4.31329 | overlap 2201934 GGAAAAATGGGAAAA CTTTC CGC GAAAG AACGCATGAAAATTC Ctha_1864 2201916 - 2203364 + | glutamate synthase (NADPH), homotetrameric TERM 3179 2203400 - 2203417 + T 100 -11.3 -5.46129 | opp_overlap 2203400 ATTGAGATAAAAAAA GGGGCTT TCAA AAGCCCC TTTTTTCGTTTGTTG TERM 3180 2203417 - 2203400 - T 100 -11.3 -5.72616 | opp_overlap 2203400 ATTGAGATAAAAAAA GGGGCTT TCAA AAGCCCC TTTTTTCGTTTGTTG Ctha_1865 2208523 - 2203445 - | filamentous haemagglutinin family outer membrane protein TERM 3181 2205789 - 2205777 - G 78 -5.5 -4.78572 | overlap 2205778 TTCCAACCAACAAAA CCTGC GGA GCAGA GCGCGGGGGCGGTAA TERM 3182 2206959 - 2206947 - G 70 -4.7 -4.46212 | overlap 2206948 TTGTCTATCACAAAA CCGGC CAA GCCGC CGACATAAGCCGATG TERM 3183 2207441 - 2207416 - G 73 -7.5 -4.0641 | opp_overlap 2207401 2207399 2207398 2207439 CGCGATTGATATAAA CGCCGTCAATC GTGT GATTGTCGCCG TCGTAGCTGCCGGTA TERM 3184 2208346 - 2208360 + g 75 -6.4 -4.54727 | GTTTGTAGTAATGCT CTGAGT TCC ACTCGG TTTTGGTTTGCGAAA TERM 3185 2208699 - 2208709 + H 88 -6.8 -5.25803 | opp_overlap 2208699 GTGGTTGGAATGAAA TGGC TAT GCCA TTTTTTCTAAGCATT TERM 3186 2208757 - 2208738 - H 70 -2.7 -5.0538 | opp_overlap 2208738, overlap 2208740 2208754 TTCCAGTTCAAAAAA GGGCGCG GCAAAA CACGCTC TTTCGGCAAATGGCG TERM 3187 2209031 - 2209048 + G 82 -5.5 -5.1675 | opp_overlap 2209032, overlap 2209032 TTGCTTTAAAACACG ACGCCTT GAAA AAGGCGA TTTTTTCATCAATGA TERM 3188 2209032 - 2209047 + G 76 -9 -3.69327 | opp_overlap 2209032, overlap 2209031 TGCTTTAAAACACGA CGCCTT GAAA AAGGCG ATTTTTTCATCAATG TERM 3189 2209415 - 2209401 - g 79 -4.3 -5.24129 | CTGCGCTACAAAAAA TTGCT TCAAG AGCAA GCGGAAGAGATAGAA Ctha_1866 2208942 - 2209532 + | cyclic nucleotide-binding protein Ctha_1867 2209753 - 2211075 + | hypothetical protein Ctha_1868 2212084 - 2211104 - | NHL repeat containing protein Ctha_1869 2213233 - 2212103 - | Peptidoglycan-binding LysM TERM 3190 2212847 - 2212829 - G 87 -10.2 -4.12198 | CATAATTTGCCAAAA GCCAGCCG CGC CAGCCGGC GAGCGAACATTCAGC TERM 3191 2213300 - 2213318 + r 72 -2.3 -5.27335 | opp_overlap 2213301, overlap 2213301 ATACGATAAAAGCAA ACGCCTT TCATC AGGGCGC TTTTTATTTAAGCCA Ctha_1870 2214133 - 2213405 - | hypothetical protein TERM 3192 2213798 - 2213818 + g 85 -6 -5.4477 | opp_overlap 2213798 CAAGAAAATATTGAA GCCGATGG AAGCG CCGCCGGC TTTTTTTGCGCCTTT TERM 3193 2213972 - 2213991 + g 74 -3.5 -5.00616 | ACCAAAAATGCTGAC TGCCGGA CCGATT TCCGCCA TTTTTTCAAAGCCGG Ctha_1871 2214744 - 2214181 - | glutamine amidotransferase of anthranilate synthase TERM 3194 2214951 - 2214917 - R 90 -2.1 -5.86332 | opp_overlap 2214889, overlap 2214921 2214941 CGAAGCGAAAAAAAA TAAACGGTTGAGTGA CAAAT TAACCCGACCGTTGA GCGTAGCCGAAACGC TERM 3195 2214947 - 2214921 - R 73 -2.9 -5.33985 | opp_overlap 2214889, overlap 2214917 2214941 GCGAAAAAAAATAAA CGGTTGAGTGA CAAAT TAACCCGACCG TTGAGCGTAGCCGAA Ctha_1872 2216475 - 2215231 - | hypothetical protein TERM 3196 2216218 - 2216167 - G 80 -12.6 -3.01712 | gap 1, opp_overlap 2216154 GCCGCCGTTGTAATA CGCCGTGTTTTTCTGAAAAAACCCC GAT AGAACTTTTTCAGAAAAAC-CGTCG TCGCAAATCACGCGC Ctha_1873 2217560 - 2216493 - | diacylglycerol kinase catalytic region TERM 3197 2217835 - 2217847 + H 85 -4.8 -5.61596 | overlap 2217833 AAAAATAAAATATGG TCGG AAAGG CCGA TTTTTTTATAGGAAT TERM 3198 2217977 - 2217967 - H 71 -3.2 -5.1287 | overlap 2217968 TGTATATTTAAAAAA CGTG CGT CACA CACCGGAAGCAACAG TERM 3199 2218093 - 2218104 + G 70 -2.2 -5.00412 | overlap 2218089 GGAGTCGCTGTTGGC GGAG CTAT CTTC TTTTTGGTTCTCTTT TERM 3200 2218178 - 2218192 + G 91 -8.6 -4.93547 | overlap 2218184 GGGTTTCGAGTTTTG CCGTTT TAA AAACGG TTTTTGGTTGGTTGG TERM 3201 2218733 - 2218687 - g 73 -11.4 -2.73829 | overlap 2218684 2218686 CCAGCTAAAGAAGAG CCAGCCGCCGCGCCAGCATCCG GTG CTGATGCAGCCGCGCCAGCTAA AGAAGAGGCTGCTTC Ctha_1874 2218051 - 2219034 + | cytochrome c class I TERM 3202 2219085 - 2219055 - T 78 -11.3 -2.87211 | opp_overlap 2219061, overlap 2219061 AGTTTTTTGGAGATA CAAAAAGACTGCC ATCAA GGCAGTCTTTTTT TTTTTCGATAAACGT TERM 3203 2219061 - 2219079 + T 100 -10.3 -6.60575 | opp_overlap 2219055 2219061 TTGGAGATACAAAAA GACTGCC ATCAA GGCAGTC TTTTTTTTTTTCGAT TERM 3204 2219079 - 2219061 - T 93 -10.3 -5.03994 | opp_overlap 2219061, overlap 2219055 TTGGAGATACAAAAA GACTGCC ATCAA GGCAGTC TTTTTTTTTTTCGAT Ctha_1875 2220086 - 2219139 - | Sua5/YciO/YrdC/YwlC family protein Ctha_1876 2220883 - 2220374 - | microcompartments protein TERM 3205 2220563 - 2220586 + g 81 -3.8 -5.36018 | gap 1, overlap 2220564 2220565 TAGGTTTGAGCCATC GTGCTCAGCAG GTG CTGC-GAGCGG TTTCTTTTTTTTGCT Ctha_1877 2221214 - 2220939 - | microcompartments protein Ctha_1878 2222014 - 2221316 - | phosphatidate cytidylyltransferase TERM 3206 2221735 - 2221770 + g 70 -4.7 -4.47328 | gap 1 AGCGAGGTTTTTCGT CGTCCAACTCGTGTGC GCGAA GCAT-CGAGCTGAACG TTTTATAGTACCATT TERM 3207 2222152 - 2222136 - R 71 -9.5 -2.59191 | overlap 2222135 GGAGATTTTTACAAT TTTTCCG AAA CGGAAAA CGATAAACGGTTGAA TERM 3208 2222344 - 2222311 - R 95 -13.3 -3.02829 | opp_overlap 2222317 2222320 2222339, overlap 2222317 2222320 TATAGCCGGTCAATA TCGAAAGAAGCCGCT ACAT AACGGCTTCTTTCTA AGCGTAGAAAATTTA TERM 3209 2222338 - 2222317 - R 84 -10.9 -3.76373 | opp_overlap 2222317 2222320, overlap 2222311 2222320 CGGTCAATATCGAAA GAAGCCGCT ACAT AACGGCTTC TTTCTAAGCGTAGAA TERM 3210 2222317 - 2222338 + r 79 -8.7 -3.87815 | opp_overlap 2222311 2222317 2222320, overlap 2222320 CGGTCAATATCGAAA GAAGCCGCT ACAT AACGGCTTC TTTCTAAGCGTAGAA Ctha_1879 2223085 - 2222357 - | ubiquinone/menaquinone biosynthesis methyltransferase Ctha_1880 2223509 - 2223087 - | Phosphoribosyl-AMP cyclohydrolase Ctha_1881 2224435 - 2223518 - | 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase-like protein TERM 3211 2224820 - 2224846 + G 85 -5.8 -5.32396 | CAGCTAAGAAAATCG TCCCGAAGTTGA CCA TCGGTGTCGGGA TTTTGTTTTTCCTAT TERM 3212 2225843 - 2225831 - g 71 -7.7 -3.9444 | overlap 2225821 2225820 CAAACCCGAAGGAAA CCTTC AAA GAAGG GATGGAAACGGAAAT Ctha_1882 2224798 - 2225883 + | efflux transporter, RND family, MFP subunit TERM 3213 2225965 - 2225935 - T 84 -9.1 -4.4715 | gap 1, opp_overlap 2225942, overlap 2225942 GGGGAAGGTATAAAA GCAAAAAGGCAGTC ATTT GGCTGCCT-TTTGC ATTACATAAAAACGA TERM 3214 2225959 - 2225942 - T 85 -6.9 -5.1417 | opp_overlap 2225942, overlap 2225935 GTATAAAAGCAAAAA GGCAGTC ATTT GGCTGCC TTTTGCATTACATAA TERM 3215 2225942 - 2225959 + T 83 -9.1 -4.28774 | opp_overlap 2225935 2225942 GTATAAAAGCAAAAA GGCAGTC ATTT GGCTGCC TTTTGCATTACATAA Ctha_1883 2226995 - 2226000 - | glyceraldehyde-3-phosphate dehydrogenase, type I Ctha_1884 2228650 - 2227139 - | Mur ligase middle domain protein TERM 3216 2228069 - 2228051 - G 78 -5.2 -5.00616 | opp_overlap 2228065 GCGCTTGTCAAAAAA CGCCGAAT CGT ACTCGTCG CCTTCGGTCACGAAA TERM 3217 2228556 - 2228544 - G 72 -2.7 -5.055 | CCAATTCCCAAAAAA TAAAG TTC CTTCA CTTGATTTGATGCCT Ctha_1885 2232065 - 2228901 - | histidine kinase TERM 3218 2229047 - 2229065 + g 72 -5.2 -4.62069 | overlap 2229014 TTGAGGATTCGCCGC CTGTCGGT CTT GCCGAAAG TTTTTGAAATCGCCC TERM 3219 2231481 - 2231471 - G 79 -2.4 -5.61881 | opp_overlap 2231438, overlap 2231438 GTTGAAAAACAAAAA TGCC TTT GGCT GTTCCGAAATAAATC TERM 3220 2231534 - 2231544 + g 95 -2.4 -6.09888 | TTGAAAAAACGGGTT CGCG AAT CGCA TTTTTTTTGTTAGGA TERM 3221 2231912 - 2231934 + g 86 -9.2 -4.38712 | GCCAGCCGTTAGGAT CAGCAGCAAT CGC ATTGATGCTG TTTTGTGGCAATCCA TERM 3222 2232285 - 2232254 - R 83 -10.3 -3.71645 | opp_overlap 2232260, overlap 2232260 AAGCGGATATCGAAA TAAAAAGAGGGCA TGACGG TGCCCTCTTTTTT CAATATAGCCGTGCA TERM 3223 2232260 - 2232279 + r 93 -10 -5.1287 | opp_overlap 2232260 2232254 ATATCGAAATAAAAA GAGGGCAT GACG GTGCCCTC TTTTTTCAATATAGC TERM 3224 2232279 - 2232260 - R 100 -9.3 -5.31519 | opp_overlap 2232260, overlap 2232254 ATATCGAAATAAAAA GAGGGCA TGACGG TGCCCTC TTTTTTCAATATAGC Ctha_1886 2234041 - 2232305 - | Na+/solute symporter TERM 3225 2233305 - 2233315 + g 72 -3.2 -5.09225 | GTGATAAAGAAAACA TCGA TCA TCGG TTTTTTGCCTGAAGT Ctha_1887 2234345 - 2234088 - | hypothetical protein TERM 3226 2234258 - 2234246 - G 71 -3.4 -4.83169 | AGGCGTCGACAAAAA GGAT GCCAA ATCC ATATGAACCCATGAA Ctha_1888 2235641 - 2234427 - | hypothetical protein TERM 3227 2236099 - 2236109 + r 85 -2.6 -5.75342 | TGATTTTGTAGCCCC TATT TTA AATA TTTTTTTTGAGAAAA TERM 3228 2236149 - 2236137 - R 78 -3.3 -5.36181 | AAACAAAAAAATAAA CACGC AAT GCTTG AAATTCTGTTAGCGA TERM 3229 2236261 - 2236271 + r 76 -2.6 -5.47159 | TATGATTTGTTGAAT TAAT AAT ATTA TTTTTATTTATTCAC Ctha_1890 2238775 - 2236733 - | metal dependent phosphohydrolase TERM 3230 2238127 - 2238137 + g 76 -4.6 -5.09225 | opp_overlap 2238127 GCGATTCCGAAAAAA CGGC GGC GCTG TTTTTTGCGTCGGGT TERM 3231 2238137 - 2238127 - G 70 -2.4 -5.03314 | opp_overlap 2238127 GCGATTCCGAAAAAA CGGC GGC GCTG TTTTTTGCGTCGGGT TERM 3232 2238168 - 2238182 + g 73 -2.2 -5.14682 | TCGTATTGCAACTGC TTGTTT TCC AAATAA TTTTCTTTGTTATAC TERM 3233 2239121 - 2239137 + G 89 -10.9 -4.18494 | GTTGGAAGTCGTGTC TGGCTGT AAT ACAGCCA TTTTAGGTCCAAATG Ctha_1891 2239035 - 2239832 + | ABC transporter-related protein TERM 3234 2239857 - 2239876 + T 100 -9.2 -5.26316 | opp_overlap 2239857, overlap 2239869 TATGCAACGAAAAAA GGCCGCTC ATTT GAGCAGCC TTTTTTATAAAATGA TERM 3235 2239876 - 2239857 - T 100 -11.4 -5.28481 | opp_overlap 2239857 2239869 TATGCAACGAAAAAA GGCCGCTC ATTT GAGCAGCC TTTTTTATAAAATGA Ctha_1892 2241616 - 2239907 - | protein of unknown function DUF1350 TERM 3236 2241049 - 2241036 - G 70 -5.3 -4.4078 | TTGTCGGAAGTAAAA TCGTT TAAA AACGA AATCATTCCAGTTAG Ctha_1893 2242206 - 2242796 + | transcriptional regulator, AraC family Ctha_1894 2242898 - 2243149 + | hypothetical protein Ctha_1895 2243151 - 2244203 + | protein of unknown function DUF201 TERM 3237 2245038 - 2245021 - g 74 -5.5 -4.56597 | opp_overlap 2245002 2245021 CTTTGCGTCGAAAAA TACGCTC AAGG GCGCGTA TTTGCCCGGCAGCGA Ctha_1896 2244239 - 2245597 + | Orn/DAP/Arg decarboxylase 2 Ctha_1897 2245760 - 2245921 + | hypothetical protein TERM 3238 2246005 - 2246025 + G 80 -6 -5.00884 | opp_overlap 2245985 2246006, overlap 2246006 2246011 GCAAACGATTTCCAA ACGCCTGC CCGAT GCGGGCGA TTTTTTGCAGGCGGT TERM 3239 2246006 - 2246024 + G 75 -9.5 -3.60048 | opp_overlap 2245985 2246006, overlap 2246005 2246011 CAAACGATTTCCAAA CGCCTGC CCGAT GCGGGCG ATTTTTTGCAGGCGG TERM 3240 2246011 - 2246023 + G 71 -10.5 -2.75708 | opp_overlap 2246006, overlap 2246006 2246005 GATTTCCAAACGCCT GCCCG ATG CGGGC GATTTTTTGCAGGCG TERM 3241 2246251 - 2246269 + G 72 -10.2 -2.8166 | overlap 2246246 2246248 GGTCGGTTTGGGGCT GGGCGCTT ATT ACGCGCCC TCCGTTTATTTGCTC TERM 3242 2246561 - 2246573 + G 70 -4.8 -4.40561 | CAGGCCTATTTTATT TCGC TGAGC GCGA TTCTTTTTCAGCAAA TERM 3243 2246760 - 2246772 + G 75 -2.6 -5.2189 | ACATTCTTTCCTCTA TCGC GCTCG GCGG TTTTTTCCTGATTCC Ctha_1898 2245943 - 2247019 + | hypothetical protein Ctha_1899 2247016 - 2248197 + | Peptidase M23 TERM 3244 2250444 - 2250476 + F 72 -2.1 -5.18726 | gap 2, opp_overlap 2250444, overlap 2250438 ACATCGCTTCAAGAA GGCG-GCG-CAAATA CGCTT TATTTGGCGCTCGGC TTTTTGTTATGGAAA TERM 3245 2251580 - 2251565 - f 83 -10.4 -3.86897 | TCGATTGGTCACAAA CGGCGA CTGG TCGCCG CAGTGGGAATCCGAA TERM 3246 2252425 - 2252409 - f 82 -10.9 -3.31799 | GACAATTTTCTACAA GCCGTTT ACG AAACGGC TGCCGACATTGCCAA TERM 3247 2254125 - 2254109 - f 74 -9.3 -3.21747 | opp_overlap 2254108 2254107, overlap 2254120 CGACTGGAGGAGCAA CCGCCGC AAA GCGTCGG AATTGCTTCACAACG Ctha_1902 2254271 - 2255608 + | hypothetical protein Ctha_1903 2255596 - 2256291 + | Tetratricopeptide TPR_2 repeat protein Ctha_1904 2256918 - 2256406 - | hypothetical protein Ctha_1905 2257131 - 2257724 + | hypothetical protein TERM 3248 2257721 - 2257702 - f 75 -3.4 -5.24129 | overlap 2257703 CCCCGGCAGAAAAAA GTCCAGCG GTTT CGCAGGAA TGACCAAAAAGCGAT TERM 3249 2257720 - 2257703 - f 70 -6.9 -3.73995 | overlap 2257702 CCCGGCAGAAAAAAG TCCAGCG GTTT CGCAGGA ATGACCAAAAAGCGA Ctha_1906 2257806 - 2257997 + | hypothetical protein TERM 3250 2258039 - 2258065 + F 82 -8.1 -4.2204 | opp_overlap 2258035 CCGGATGAAAGCATG CTTCGCCA-GCCG GCT CGGCATGGC-AAG TTATTTATTCAACTT TERM 3251 2259498 - 2259457 - g 72 -6.5 -4.33182 | opp_overlap 2259466 CGATTGATAAAAGAA TGGCTCAAACCCGAAAATC GCGT GATTCTCGTGAGTGCGCCA GAAAAAGAATCAGTT TERM 3252 2260087 - 2260040 - g 71 -10.7 -2.69151 | gap 3, opp_overlap 2260040 2260040 2260041, overlap 2260037 TTCGTTCATATATCA CGCGTTTCCG-CGGGCTGCTG-GA AAA TCGCAGCCGCCAGCCGGAAAC-CG CATTTTTCGACACGC TERM 3253 2260040 - 2260089 + G 80 -7.2 -4.57073 | gap 3, opp_overlap 2260040 2260037, overlap 2260040 2260041 TTCGTTCATATATCA CGC-GTTTCCG-CGGGCTGCTG-GA AAA TCGCAGCCGCCAGCCGGAAACCGCA TTTTTCGACACGCTG TERM 3254 2260040 - 2260087 + G 71 -10.7 -2.60032 | gap 3, opp_overlap 2260040 2260037, overlap 2260040 2260041 TTCGTTCATATATCA CGCGTTTCCG-CGGGCTGCTG-GA AAA TCGCAGCCGCCAGCCGGAAAC-CG CATTTTTCGACACGC TERM 3255 2260041 - 2260088 + G 77 -10.7 -3.33922 | gap 3, opp_overlap 2260040 2260037, overlap 2260040 2260040 TCGTTCATATATCAC GC-GTTTCCG-CGGGCTGCTG-GA AAA TCGCAGCCGCCAGCCGGAAACCGC ATTTTTCGACACGCT TERM 3256 2260409 - 2260397 - g 88 -3.3 -5.64274 | opp_overlap 2260398, overlap 2260398 GGATTGAGAAAAAAA GTCGC GTC GCGAT GATTTTTACAGGCGA Ctha_1907 2258101 - 2260926 + | peptidase M16 domain protein Ctha_1908 2262596 - 2260923 - | surface antigen (D15) TERM 3257 2261733 - 2261721 - G 74 -5.5 -4.62471 | opp_overlap 2261721, overlap 2261722 TGGAATGTTTAAAAA CCACG GCT CGTGA TATTGCATCGTAACT TERM 3258 2265639 - 2265624 - g 73 -4 -4.74103 | CTTTCAATCCAAAAA CACAAA CTTT TTCGTG GAAACCAACCTATGA TERM 3259 2266598 - 2266588 - g 74 -8.2 -3.98378 | GATAGCCAACAAGAA CCGG AAG CCGG AGTTGGAAGTGCCGG Ctha_1909 2262911 - 2267440 + | Ig family protein TERM 3260 2267468 - 2267490 + F 86 -9.9 -4.36127 | opp_overlap 2267468 AAAATTTGTTAATCA GGGCAATTC GGATA GGATTGCCC TTTTGCGTTATTAAA Ctha_1910 2267509 - 2268411 + | hypothetical protein TERM 3261 2268428 - 2268466 + T 86 -5.5 -5.52986 | gap 1, opp_overlap 2268433, overlap 2268433 ACAGACTGTAAACGA AAAAAGCATATCC-TAAG AATT CTAATGGATATGCTTTTA TTTTTTTAGTGAAGT TERM 3262 2268433 - 2268461 + T 86 -5.4 -5.57888 | gap 1, opp_overlap 2268433, overlap 2268428 CTGTAAACGAAAAAA GCATATCC-TAAG AATT CTAATGGATATGC TTTTATTTTTTTAGT TERM 3263 2268461 - 2268433 - T 83 -5.4 -5.37593 | gap 1, opp_overlap 2268433 2268428 CTGTAAACGAAAAAA GCATATCC-TAAG AATT CTAATGGATATGC TTTTATTTTTTTAGT Ctha_1911 2268798 - 2268502 - | hypothetical protein TERM 3264 2269107 - 2269121 + G 85 -5.6 -5.40072 | overlap 2269109 ATCCTTTTACTGGAT CACGCA AGT TGCGCG TTTTTTTGCCAAAAA TERM 3265 2269334 - 2269320 - g 88 -3.6 -5.64274 | GTATGCACAAAAAAA TTCTCA AAG TGAAAA TGGAGGGATTTGGCG TERM 3266 2269411 - 2269425 + G 81 -3.5 -5.27923 | GCCGCTTTTATGTTG CCAGG AAGAA CTTGG TTTTTTATCGCATTG Ctha_1912 2269051 - 2269704 + | hypothetical protein TERM 3267 2269904 - 2269926 + F 100 -4.8 -5.9667 | opp_overlap 2269904 ATGAAATACGCGAAA GCCTTTGC CCGTTCC GCATAGGC TTTTTTTATGTTTTT Ctha_1913 2269986 - 2271188 + | Methionine adenosyltransferase Ctha_1914 2271246 - 2272553 + | adenosylhomocysteinase TERM 3268 2272560 - 2272581 + F 70 -5.2 -4.56775 | overlap 2272564 CGTTATTGATTTTTG CAAGGAGA GTTGAA TCTCTTTG TTTTTCAAGGCAGCT TERM 3269 2272590 - 2272612 + F 100 -12 -5.93809 | CTCTTTGTTTTTCAA GGCAGCTCAG TTT TTGGGCTGCC TTTTTTTTATGGCAA TERM 3270 2272685 - 2272669 - f 86 -9.5 -4.4009 | CCTGAGCTGATAAAA TTTTCCG AAG CGGAAAA AAGTAGATTGGTGAA Ctha_1915 2273150 - 2276722 + | DNA polymerase III, alpha subunit Ctha_1916 2276862 - 2277188 + | thioredoxin Ctha_1917 2277192 - 2277443 + | glutaredoxin TERM 3271 2277892 - 2277912 + G 82 -5.5 -5.18726 | overlap 2277893 CTACTTGTGACGGAT TCTTTTTTC AGG GAAAAGAGG TTTTTGTTGTGGGCG Ctha_1918 2277456 - 2278403 + | thioredoxin reductase TERM 3272 2280202 - 2280191 - g 76 -4.4 -5.055 | overlap 2280196 TTAATTCTGAAAAAA CAGT ATTT ACTG AAAGTAAAAAGAATG Ctha_1919 2278543 - 2280963 + | hypothetical protein TERM 3273 2281414 - 2281398 - g 71 -3.7 -4.74103 | overlap 2281400 GTTTCAATGCAAAAA TATCTGA AGT TCAGAAA GCAATTGATGAATCT Ctha_1920 2281007 - 2281783 + | MotA/TolQ/ExbB proton channel TERM 3274 2281840 - 2281806 - f 81 -11.6 -2.70525 | opp_overlap 2281813, overlap 2281813 TTCTTTGAAACGAAT TTTTAAAGAGCCCTTT TTA AACGGGCTCTTTAAAG TAAAATATAACAGCT TERM 3275 2281833 - 2281813 - f 80 -9.7 -3.6288 | opp_overlap 2281813, overlap 2281806 AAACGAATTTTTAAA GAGCCCTTT TTA AACGGGCTC TTTAAAGTAAAATAT TERM 3276 2281813 - 2281833 + F 80 -9.7 -3.60805 | opp_overlap 2281813 2281806 AAACGAATTTTTAAA GAGCCCTTT TTA AACGGGCTC TTTAAAGTAAAATAT Ctha_1921 2281856 - 2282350 + | Biopolymer transport protein ExbD/TolR Ctha_1922 2282507 - 2283007 + | Biopolymer transport protein ExbD/TolR Ctha_1923 2283023 - 2284039 + | hypothetical protein TERM 3277 2284073 - 2284115 + F 100 -16 -3.53343 | opp_overlap 2284082 ATACTGATGCTTTGT TTTAGCATATGGACAGAA CTCGATA TTCTGTTCATATGCTAAA TTTCAAGCAAAAGTT TERM 3278 2284302 - 2284285 - g 80 -7.1 -4.64766 | CTGATACGTTAAAAA CATCTAA TGAT TTAGATG ATAAAATTTCACGTT TERM 3279 2285414 - 2285404 - g 72 -5.4 -4.55287 | overlap 2285413 TTGAGGTATATAAAA CCTT ATT AAGG CGTTTCCCTGATTAT TERM 3280 2286445 - 2286431 - g 83 -4.2 -5.28983 | TCCAAAAGATAAAAA GCGAAG AGA CTTTGC ATATAAAAGAATTGG TERM 3281 2287285 - 2287274 - g 79 -4.4 -5.16472 | AAAAAGTGCAAAAAA GAAG AAAG CTTC AGTCCAAAAAGATAA Ctha_1924 2284143 - 2290652 + | Tetratricopeptide TPR_2 repeat protein Ctha_1925 2290663 - 2291043 + | hypothetical protein TERM 3282 2291128 - 2291096 - f 76 -2.8 -5.49809 | gap 1, opp_overlap 2291096 GAAATTTTAAAAAAA GTCAAGC-TCGTATT ATAA AGTATGATGCTTGAC TTTTTATTTTATATA TERM 3283 2291096 - 2291128 + F 93 -7.2 -5.58522 | gap 1, opp_overlap 2291096 GAAATTTTAAAAAAA GTCAAGC-TCGTATT ATAA AGTATGATGCTTGAC TTTTTATTTTATATA TERM 3284 2291894 - 2291881 - g 76 -2.4 -5.32882 | TATGACTATAAAAAA GCAT TAGAAT ATGC AACTATTTTATATAA Ctha_1926 2291155 - 2292333 + | Tetratricopeptide domain protein TERM 3285 2293369 - 2293379 + G 75 -3.2 -5.26247 | TAATCCGTTTCAGGT TGCC GTA GGTA TTTTATTTGTTTTGC Ctha_1927 2292335 - 2293576 + | hypothetical protein Ctha_1928 2295041 - 2293566 - | Na+/solute symporter TERM 3286 2295011 - 2294983 - G 100 -13.4 -5.57054 | AATAAGCCAAAAAAA GTGATGCTAATA AAATA TATTAGCATCAC TGTCCAATCTAATAA Ctha_1929 2295761 - 2295057 - | anti-sigma-factor antagonist TERM 3287 2295495 - 2295510 + g 72 -2.6 -5.03314 | gap 1 TCCGGTCATTTTAAG C-AAGTC GCG GACTTTG TTTTTTACGCCTACA TERM 3288 2295682 - 2295703 + g 73 -2.2 -5.22312 | TCGGACTTTAACTCC GGTGCGAT AGAAGC ATCGAGCC TTTTTTCATGTAGCT TERM 3289 2295929 - 2295906 - R 78 -5.5 -5.02323 | opp_overlap 2295905 2295906 2295910 TTATGATAAATAAAA TAAATTCAT GTTTAT ATGAATTTA GTTGTGTGCTTCGGT Ctha_1930 2297243 - 2296107 - | transposase IS4 family protein Ctha_1931 2297669 - 2298865 + | OmpA/MotB domain protein TERM 3290 2298874 - 2298904 + T 100 -12.7 -5.27023 | GATGTAATGGCCAGT TGCCGCAGGAT ATGTTCTCC ATCCTGCGGCA TTTTATTTTTCGGGT Ctha_1932 2299891 - 2298920 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 3291 2299210 - 2299229 + g 72 -5 -4.64657 | TTTCAAATAACCGCG TGGCTTCT TCCA AAAAGCCA TTTTTAAACATTTCG Ctha_1933 2300830 - 2300345 - | putative phosphohistidine phosphatase, SixA TERM 3292 2300725 - 2300712 - G 70 -2.3 -5.08824 | TTTCGATGCAAAAAA TCGCC TAAC GCCGA AGCTTCTTGAAGACC Ctha_1934 2301417 - 2300842 - | maf protein TERM 3293 2301513 - 2301527 + r 74 -8.6 -3.67597 | CGAAGCGTTCATGCG TCCAAC TAA GTTGGA TTCTTCGCTAAGAAG TERM 3294 2301578 - 2301542 - R 78 -9.6 -3.61517 | ATTCTTCGCTAAGAA GCTCAGAATGACAA GCATGTTCT TTGTCATGCTGAGC AACGCGAAGCATCCA Ctha_1935 2301854 - 2301654 - | hypothetical protein TERM 3295 2301749 - 2301713 - G 75 -9.6 -3.61517 | ATTCTTCGCTAAGAA GCTCAGAATGACAA GCATGTTCT TTGTCATGCTGAGC AACGCGAAGCATCCA Ctha_1936 2303639 - 2301879 - | Na+/solute symporter TERM 3296 2303271 - 2303258 - G 72 -5.9 -4.54343 | ACAAACCGAAATAAA CGGCC TTGA AGCCG CGAAGAAATTCAGCG TERM 3297 2303300 - 2303280 - G 71 -6.8 -4.1673 | opp_overlap 2303296 GAAGCCGCGAAGAAA TTCAGCGG GCTTG CCGCTGTA GCGCAGTTCGATAAA TERM 3298 2303387 - 2303367 - G 89 -5.3 -5.75342 | overlap 2303369 TCGGGCGAAAAAAAA CACGGTGAG CAT CCCACCGAA GACGAACGACCACCA TERM 3299 2303385 - 2303369 - G 90 -10.1 -4.52949 | overlap 2303367 GGGCGAAAAAAAACA CGGTGAG CAT CCCACCG AAGACGAACGACCAC TERM 3300 2303947 - 2303934 - g 70 -2.4 -5.03314 | overlap 2303918 TGTATGGCCAAAAAA CGTT AGGCCA AACG CCCGGTTCATTAGAT TERM 3301 2305347 - 2305335 - g 72 -6.2 -4.21773 | TCTCAACAGAAACAA CCGC AGGCA GCGG CACGGGAAACATACA Ctha_1937 2303813 - 2306407 + | hypothetical protein TERM 3302 2306458 - 2306433 - T 78 -10.5 -3.06315 | opp_overlap 2306438, overlap 2306424 2306438 TGAACATCTCTAATA GAAAAGGGGCT GGAA AGCCCCTTTTT TTCATGTGTTTTGAA TERM 3303 2306438 - 2306453 + T 100 -10.4 -5.62219 | opp_overlap 2306433 2306438 ATCTCTAATAGAAAA GGGGCT GGAA AGCCCC TTTTTTTCATGTGTT TERM 3304 2306453 - 2306438 - T 89 -10.4 -4.66938 | opp_overlap 2306438, overlap 2306433 ATCTCTAATAGAAAA GGGGCT GGAA AGCCCC TTTTTTTCATGTGTT Ctha_1938 2307368 - 2306460 - | lipid A biosynthesis acyltransferase TERM 3305 2306829 - 2306876 + g 90 -13.4 -3.50854 | overlap 2306805 2306802 2306826 GCGAATGCACTCTCG TGGCGCTTGTTTCATGCCGACC ATGC GGTTGCCATGCAGCGTGCGCCA TTCATTCATTCTTCT Ctha_1939 2307500 - 2308006 + | rfaE bifunctional protein TERM 3306 2308466 - 2308454 - g 78 -6.2 -4.62336 | ACTTGATTCGAAAAA GCCG GAGAG CGGC ACAAGCTTTTTTCCT TERM 3307 2308724 - 2308740 + G 73 -4.4 -4.88067 | gap 1, overlap 2308727 TTCATTTGAACTGGC CACGCCG AACT CGGC-TG TTTTTCTAACTGCGT TERM 3308 2308727 - 2308738 + G 71 -7.2 -4.06182 | overlap 2308724 ATTTGAACTGGCCAC GCCG AACT CGGC TGTTTTTCTAACTGC TERM 3309 2311083 - 2311068 - g 70 -4.7 -4.41494 | opp_overlap 2311078 CATGTGCAAGGAAAA TTGCC TCTTAC GGCAA GCGTGACCGGTTATT Ctha_1940 2308017 - 2312747 + | hypothetical protein Ctha_1941 2312767 - 2314020 + | phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase Ctha_1942 2314105 - 2314731 + | phage SPO1 DNA polymerase-related protein Ctha_1943 2314789 - 2316381 + | replicative DNA helicase TERM 3310 2316431 - 2316452 + T 93 -10.1 -5.00138 | opp_overlap 2316431 CATAGAAATTCAAAA GCCTGAACG AAAC CGCTCAGGC TTTTTGCTTTCGATA TERM 3311 2316452 - 2316431 - T 100 -12.3 -4.41177 | opp_overlap 2316431 CATAGAAATTCAAAA GCCTGAACG AAAC CGCTCAGGC TTTTTGCTTTCGATA TERM 3312 2316490 - 2316473 - T 79 -4.9 -5.24129 | GCTTTCGATAAAAAA CGATTCA GCAG TAAATCG GAAAATAATGGGGGC Ctha_1944 2316975 - 2316514 - | hypothetical protein TERM 3313 2317063 - 2317078 + r 79 -9 -3.99324 | opp_overlap 2317062 GCTGACTTTACAGAG GCGGAT TTTT ATCCGC TTTCTGCTGGTGGCC Ctha_1945 2318528 - 2317116 - | two component, sigma54 specific, transcriptional regulator, Fis family TERM 3314 2317869 - 2317856 - G 88 -8.1 -4.77036 | opp_overlap 2317857 GTTCATGACCAAAAA GCTCG GCTT CGAGC AGCGTTTCCGGTAGC Ctha_1946 2318847 - 2320271 + | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 3315 2320280 - 2320317 + F 88 -9.3 -4.68545 | overlap 2320281 AGTTTAATTTATCAC GCCATAAAGAATCCGTG CTGC TATGGGTTCTTTATGGG TTTTATCTGTTCAGT TERM 3316 2320281 - 2320316 + F 95 -12.8 -3.40043 | overlap 2320280 GTTTAATTTATCACG CCATAAAGAATCCGTG CTGC TATGGGTTCTTTATGG GTTTTATCTGTTCAG TERM 3317 2321098 - 2321122 + G 70 -4.9 -4.38154 | TTTTACGGTGAACTG CTCCGGCGATT GGC AAACGATGGAG TTTTCTGCAAGGTGT Ctha_1947 2320438 - 2321535 + | glycosyl transferase family 9 Ctha_1948 2321567 - 2322730 + | glycosyl transferase group 1 TERM 3318 2323489 - 2323504 + F 80 -6.1 -5.06052 | opp_overlap 2323489, overlap 2323484 ACATAAACAGAAAAA GCCTC TTAAAC GAGGC TTTTCTATTTTTTAG TERM 3319 2323504 - 2323489 - f 84 -6.1 -5.26155 | opp_overlap 2323489 2323484 ACATAAACAGAAAAA GCCTC TTAAAC GAGGC TTTTCTATTTTTTAG Ctha_1949 2323849 - 2324409 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Ctha_1950 2324433 - 2325365 + | ROK family protein Ctha_1951 2325733 - 2325422 - | hypothetical protein TERM 3320 2326226 - 2326205 - H 73 -3.9 -5.04385 | gap 1 CATATTTCCAAAAAA TCGGTTATTT TTG AAATAAC-GA ATTCAAATCCAAAAA TERM 3321 2326690 - 2326664 - g 70 -5.1 -4.50627 | gap 1, overlap 2326665 GATTGATGAAAGAAA CTGCCGACAGCG CCTC CGCCA-CGGCAA CCGAAGAACAAACTG Ctha_1952 2326252 - 2328849 + | hypothetical protein TERM 3322 2328878 - 2328902 + F 100 -5.7 -6.10295 | opp_overlap 2328878 TTTTACAGAGAAAAA TGGCCAATTCG CAG CAAGTTGGTCA TTTTTTTTCTGTTAC TERM 3323 2328902 - 2328878 - f 71 -3.5 -5.03994 | opp_overlap 2328878 TTTTACAGAGAAAAA TGGCCAATTCG CAG CAAGTTGGTCA TTTTTTTTCTGTTAC Ctha_1953 2328929 - 2330272 + | Xaa-Pro aminopeptidase Ctha_1954 2331734 - 2330307 - | RNA methyltransferase, TrmA family Ctha_1955 2331909 - 2332784 + | UbiA prenyltransferase Ctha_1956 2332839 - 2333147 + | hypothetical protein Ctha_1957 2333567 - 2334889 + | Glycine hydroxymethyltransferase TERM 3324 2334904 - 2334928 + T 100 -11.4 -5.55769 | opp_overlap 2334904 ATTCCTTTTCAAGTA GCCGTCGGAG TCAAT TTCCGGCGGC TTTTTTGTTATAGCA Ctha_1958 2335083 - 2334886 - | hypothetical protein TERM 3325 2335182 - 2335164 - H 89 -10.2 -4.59773 | TCCGATTCGGAAAAA TGGCCGGC TCA GCCGGACA CGGAGTTTAGTATGC TERM 3326 2335320 - 2335302 - g 73 -2.4 -5.16572 | ATTCAATTGAAAAAA TCGTCGAT CTG ATCAATGA AGGGATGGATGTTGC TERM 3327 2335912 - 2335900 - g 70 -4.7 -4.4267 | TGCCAAAATCGAAAA GCCGG AAG CCGTC GCTAATATCGATGCG Ctha_1959 2335244 - 2336677 + | pyruvate kinase Ctha_1960 2337879 - 2336707 - | YibE/F family protein TERM 3328 2337472 - 2337462 - G 70 -2.4 -5.02201 | AAAACACTAGAAAAA GGGC AAA GACC AAAAATAAGATAAAT TERM 3329 2337935 - 2337910 - R 100 -11.1 -5.71712 | gap 1, overlap 2337926 GTGGATATAAAAAAA GCGGCACGAGCA AAA CGC-CGCGCCGC CTTAGAAAGCTATAA Ctha_1961 2339851 - 2337959 - | Alkaline phosphatase TERM 3330 2340917 - 2340907 - g 100 -4 -5.8187 | CATCCAACAAAAAAA GAAT TTT ATTC TGAAGCCGCTAAGGT Ctha_1962 2340238 - 2341086 + | NAD-dependent epimerase/dehydratase TERM 3331 2341134 - 2341123 - g 71 -7.2 -4.07687 | opp_overlap 2341109 AGCGCTCCGGCAAAA GCGC TTTT GCGC AAAAGTTGGCCAAAA TERM 3332 2341328 - 2341339 + G 76 -4.4 -5.00616 | GGATTGCGTGACGCT TTGG CTGA CCAA TTTTTTCACCGACAC Ctha_1963 2341083 - 2341586 + | cobalbumin biosynthesis protein Ctha_1964 2341763 - 2343262 + | hypothetical protein TERM 3333 2343332 - 2343311 - f 86 -8.6 -4.54727 | opp_overlap 2343311, overlap 2343306 TGGGGTAAAGGAAAA GCCGGCTC TCTCTT GGGCCGGC TTTTTTTGATTATGA TERM 3334 2343311 - 2343332 + F 100 -10.8 -5.68023 | opp_overlap 2343311 2343306 TGGGGTAAAGGAAAA GCCGGCTC TCTCTT GGGCCGGC TTTTTTTGATTATGA TERM 3335 2344055 - 2344025 - g 71 -10.6 -2.72461 | gap 1, overlap 2344024 CAACTTCGCTCAAAT CCGATTGCGCAAA TTGATT TTTGCGCAA-CGG TTGAAATGAATGACC Ctha_1965 2343344 - 2344846 + | hypothetical protein Ctha_1966 2345435 - 2344848 - | NADH-quinone oxidoreductase, E subunit TERM 3336 2345393 - 2345411 + g 82 -11 -3.49878 | opp_overlap 2345359 TTTGAAGGCTATCAC CATGCGCA GCA TGCGCGTG TTCTCCGTTTGATTG Ctha_1967 2347057 - 2345735 - | NADH dehydrogenase I, D subunit TERM 3337 2346022 - 2346036 + g 84 -8.6 -4.6759 | AATGGTAAATTTCAT CTTTCC ACG GGAAAG TTTTCTTCGCATCTT TERM 3338 2346735 - 2346745 + g 74 -5.4 -4.64861 | GTGTAGGGCATGAAC TCGT GAT ACGA TTTGTTTTCGGCCAA Ctha_1968 2347612 - 2347079 - | NADH (or F420H2) dehydrogenase, subunit C Ctha_1969 2348337 - 2347777 - | NADH-quinone oxidoreductase, B subunit TERM 3339 2348176 - 2348163 - G 73 -4.5 -4.87318 | overlap 2348156 GCGAAAATCGAAAAA CCTCG GCGC CGAAG CGGGCAATGTCGTAG Ctha_1970 2349582 - 2348629 - | Methyltransferase type 12 TERM 3340 2348984 - 2349005 + g 72 -5.1 -4.57837 | ACCATCAAAACGCCA TCGGGTTGC AAAA GCGACTTGA TTTTTCCCAGCGTCT Ctha_1971 2350830 - 2349640 - | hypothetical protein Ctha_1972 2351415 - 2350903 - | histidine triad (HIT) protein TERM 3341 2351589 - 2351615 + r 73 -4.4 -4.9792 | opp_overlap 2351575 ACATAAAAAAATTGT TTATGTGTGAGC CAT GCACGCATGTAA TTTTTCTATGAAATC Ctha_1973 2352161 - 2351589 - | hypothetical protein TERM 3342 2352212 - 2352171 - R 100 -13.3 -5.18371 | TTTCATAAAATAAAA TAGGCTTATAGGTTCTT TTGATTTC ACGAACCTATAAGCCTA ACAGAGGAGTTACAG Ctha_1974 2352764 - 2352243 - | hypothetical protein TERM 3343 2353188 - 2353173 - g 82 -7.5 -4.57073 | GATTGCGTCCAAAAA CGCCG TGATTC CGGCG TCGGTCGGTGTCGAC TERM 3344 2353532 - 2353514 - g 82 -13.2 -3.01712 | overlap 2353525 2353526 CCGGTTCGCGCAACA TCGGCAAG GAA CTTGCCGA CGCGCACATCACGGC TERM 3345 2353553 - 2353525 - g 70 -8.8 -3.35639 | opp_overlap 2353546, overlap 2353514 2353526 2353544 AACATCGGCAAGGAA CTTGCCGACGCG CACAT CACGGCGGCAAA ATCGCTTTTCAACGC TERM 3346 2353838 - 2353826 - g 71 -10.5 -2.74144 | overlap 2353825 TCGTGACGCGCAAAG GCGCG GTG CGCGC GGGCGCTTCGGATTA TERM 3347 2353991 - 2353978 - g 73 -2.3 -5.15969 | overlap 2353956 GCGCAAGCCAAAAAA CGCTT CACG ACGCG CGACCTCGAGCGCCA TERM 3348 2354100 - 2354137 + G 79 -9.4 -4.19177 | gap 1, opp_overlap 2354099 2354094 CATGCAAAACCAGAG CGATTTGGTGGAAATTC TGGCC GAACTTC-ACCAAATCG TTTGTATTAAGGGCT Ctha_1975 2352979 - 2354154 + | protein of unknown function UPF0027 Ctha_1976 2354747 - 2354157 - | hypothetical protein Ctha_1977 2354965 - 2356749 + | peptidase M61 domain protein TERM 3349 2357012 - 2356996 - g 76 -8.7 -4.08557 | TGTTTCAAATAATAA GCAAGTC TCC GACCTGC TGAAAAACAACGAAA TERM 3350 2357109 - 2357120 + G 71 -7.2 -4.08216 | overlap 2357104 TTAACGATATGCCTG CGCC GGTT GGCG TTTTAAAAGAAGTCG Ctha_1978 2356775 - 2358496 + | DNA repair protein RecN TERM 3351 2358559 - 2358576 + F 100 -12.7 -5.55001 | TGCTCTCTCTTCTCG CTCCGGC TTTT GCCGGAG TTTTATTTTTTCTTG TERM 3352 2359089 - 2359076 - g 75 -6.7 -4.3767 | opp_overlap 2359075 2359076 CCATACTACAACAAA CCTTC TCAA GAAGG ATTTTATCAACATTA Ctha_1979 2358737 - 2359645 + | dihydrodipicolinate synthase TERM 3353 2359697 - 2359680 - f 91 -9.9 -4.82901 | opp_overlap 2359680 TTTTTTTGATAAAAA GCAGGAT TTGT ATCCTGC TTTTTTATTTCGCGA TERM 3354 2359680 - 2359697 + F 100 -9.9 -5.63517 | opp_overlap 2359680 TTTTTTTGATAAAAA GCAGGAT TTGT ATCCTGC TTTTTTATTTCGCGA TERM 3355 2360397 - 2360408 + G 72 -5.8 -4.4084 | opp_overlap 2360395 2360397 ATGCCAGCGACAATA CCTG CACG CAGG TTTTGATGTATGGTT TERM 3356 2360690 - 2360676 - g 75 -2.8 -5.18561 | overlap 2360677 2360680 TAAAGATCCAAAAAA CCGATA CAA TACCGA GCATTGTGGTGCCGC TERM 3357 2360742 - 2360756 + G 74 -5.6 -4.57569 | TTTCTTCTCGCTATT GGACTG TGA CTGTCC TTTTTGGCACAGTGG Ctha_1980 2360177 - 2360836 + | hypothetical protein Ctha_1981 2360833 - 2361576 + | hypothetical protein TERM 3358 2361596 - 2361628 + T 81 -10.5 -3.53012 | opp_overlap 2361597 2361599, overlap 2361599 2361603 GTGGTGTAACCAAAA AGCGCAAGGCAGGGA AAA TCCCTGCCTTGATCA TTTAGAGCCGAACCG TERM 3359 2361627 - 2361597 - T 100 -14 -4.8622 | opp_overlap 2361596 2361599 2361603, overlap 2361599 TGGTGTAACCAAAAA GCGCAAGGCAGGGA AAA TCCCTGCCTTGATC ATTTAGAGCCGAACC TERM 3360 2361625 - 2361599 - T 100 -15.2 -2.70268 | opp_overlap 2361599 2361596 2361603, overlap 2361597 GTGTAACCAAAAAGC GCAAGGCAGGGA AAA TCCCTGCCTTGA TCATTTAGAGCCGAA TERM 3361 2361599 - 2361625 + T 100 -15.2 -2.90496 | opp_overlap 2361597 2361599, overlap 2361596 2361603 GTGTAACCAAAAAGC GCAAGGCAGGGA AAA TCCCTGCCTTGA TCATTTAGAGCCGAA TERM 3362 2361603 - 2361621 + T 100 -14.6 -3.32769 | opp_overlap 2361599 2361597, overlap 2361599 2361596 AACCAAAAAGCGCAA GGCAGGGA AAA TCCCTGCC TTGATCATTTAGAGC Ctha_1982 2362316 - 2361645 - | nitroreductase TERM 3363 2362392 - 2362376 - R 78 -9.4 -3.5486 | opp_overlap 2362376, overlap 2362374 GAGCGTAAGGAAAGA GCCGCA GCAGA TGCGGC TTTTCCGTAAACATG TERM 3364 2362376 - 2362392 + r 82 -9.4 -4.18494 | opp_overlap 2362376 2362374 GAGCGTAAGGAAAGA GCCGCA GCAGA TGCGGC TTTTCCGTAAACATG Ctha_1983 2363745 - 2362414 - | Glycine dehydrogenase (decarboxylating) TERM 3365 2363874 - 2363843 - R 78 -9.6 -3.63922 | opp_overlap 2363841, overlap 2363841 2363865 2363869 2363871 ATTCCTGCGAAAATA GGAATCTTTCTTTT CAGC AACAGAAAGACTCC AGCTTTCGCTGGAGT TERM 3366 2363890 - 2363869 - R 83 -8.7 -4.23674 | opp_overlap 2363841, overlap 2363843 2363841 2363865 2363871 TTTCAGCAACAGAAA GACTCCAGC TTTC GCTGGAGTG ACAAAATCAGATCAT TERM 3367 2363888 - 2363871 - R 84 -11.3 -3.71627 | opp_overlap 2363841, overlap 2363843 2363841 2363865 2363869 TCAGCAACAGAAAGA CTCCAGC TTTC GCTGGAG TGACAAAATCAGATC Ctha_1984 2364346 - 2363960 - | glycine cleavage system H protein Ctha_1985 2365954 - 2364518 - | O-succinylbenzoate-CoA ligase Ctha_1986 2367057 - 2365951 - | Mandelate racemase/muconate lactonizing protein TERM 3368 2366995 - 2366964 - G 87 -9.5 -4.34789 | gap 1, opp_overlap 2366965, overlap 2366961 2366965 GAAGGCATAAAATAA GGCCAAGCCGTGAG ATGTG CTCACGGCCTA-CC ATTCTGAGCGCCTTA TERM 3369 2366995 - 2366965 - G 71 -9.7 -3.19789 | opp_overlap 2366965, overlap 2366964 2366961 AAGGCATAAAATAAG GCCAAGCCGTGAG ATGTG CTCACGGCCTACC ATTCTGAGCGCCTTA Ctha_1987 2367878 - 2367054 - | naphthoate synthase TERM 3370 2367227 - 2367239 + g 72 -4.8 -4.60924 | opp_overlap 2367227 CTTTGAGGCAGCGAA TCGC AAGCG GCGA TTTTTCAAGGATTTC Ctha_1988 2368694 - 2367885 - | alpha/beta hydrolase fold TERM 3371 2368462 - 2368474 + g 77 -3.3 -5.22039 | opp_overlap 2368463, overlap 2368463 TTTAGAAAATCCGAA ATGCC TTT GGCAG TTTTTTCCATTTGGA TERM 3372 2368710 - 2368722 + r 73 -2.7 -5.31877 | TTCAAAGCGTCTAAT TCGTT TAA AATGA TTTTTTGTAATGACT Ctha_1989 2370439 - 2368691 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 3373 2369293 - 2369319 + g 76 -4.5 -5.02074 | gap 1 TTTCCGAAAGCAAAT CGTTCGGGCGAA GGTG TTTGCCT-AACG TTTTTTCAACCATCC TERM 3374 2369830 - 2369818 - G 72 -2.6 -5.0538 | TGTTATCGGAAAAAA GCAC AGCAG GCGC ATATTCGCTGTAAGG Ctha_1990 2371868 - 2370432 - | isochorismate synthase TERM 3375 2371035 - 2371025 - G 74 -8.2 -3.86346 | CGATGCGCTTATAAA GCCG CTC CGGC GTTGCGCCAATGAAG TERM 3376 2371977 - 2371963 - H 86 -8.6 -4.63486 | opp_overlap 2371962 2371965 ATGTTTCCAAGAAAA CACACA GGC TGTGTG CTGTCGTAATCGTCA TERM 3377 2373551 - 2373529 - g 80 -9.8 -3.88291 | CAGCACCGGCACAAA CGGCCAAGCA GGC TTCCTGGCCG GCGAGGCGGATTCCA Ctha_1991 2372504 - 2374582 + | Fibronectin type III domain protein TERM 3378 2374630 - 2374612 - f 100 -13.2 -4.78764 | opp_overlap 2374612 CAAATCGAGTAAAAA GGGACTTC TAA GAAGTCCC TTTTTTAGTTCACCA TERM 3379 2374612 - 2374630 + F 100 -13.2 -5.26875 | opp_overlap 2374612 CAAATCGAGTAAAAA GGGACTTC TAA GAAGTCCC TTTTTTAGTTCACCA Ctha_1992 2374937 - 2375470 + | regulator of chromosome condensation RCC1 Ctha_1993 2375514 - 2377598 + | Fibronectin type III domain protein TERM 3380 2377618 - 2377650 + F 81 -10.5 -3.53012 | opp_overlap 2377619 2377621, overlap 2377621 2377625 GTGGTGTAACCAAAA AGCGCAAGGCAGGGA AAA TCCCTGCCTTGATCA TTTAGAGCCGAACCG TERM 3381 2377649 - 2377619 - f 100 -14 -4.8622 | opp_overlap 2377618 2377621 2377625, overlap 2377621 TGGTGTAACCAAAAA GCGCAAGGCAGGGA AAA TCCCTGCCTTGATC ATTTAGAGCCGAACC TERM 3382 2377621 - 2377647 + F 100 -15.2 -2.90496 | opp_overlap 2377619 2377621, overlap 2377618 2377625 GTGTAACCAAAAAGC GCAAGGCAGGGA AAA TCCCTGCCTTGA TCATTTAGAGCCGAA TERM 3383 2377647 - 2377621 - f 100 -15.2 -2.70268 | opp_overlap 2377621 2377618 2377625, overlap 2377619 GTGTAACCAAAAAGC GCAAGGCAGGGA AAA TCCCTGCCTTGA TCATTTAGAGCCGAA TERM 3384 2377625 - 2377643 + F 100 -14.6 -3.32769 | opp_overlap 2377621 2377619, overlap 2377621 2377618 AACCAAAAAGCGCAA GGCAGGGA AAA TCCCTGCC TTGATCATTTAGAGC Ctha_1994 2378060 - 2380039 + | threonyl-tRNA synthetase Ctha_1995 2380108 - 2380776 + | translation initiation factor IF-3 Ctha_1996 2380823 - 2381017 + | ribosomal protein L35 TERM 3385 2381119 - 2381081 - g 71 -3.6 -4.74706 | overlap 2381082 2381083 2381085 GCCAAGATCGAAAAA CGCAGTAGCCTCACGCGC CCG GCGCAAACGGCTGCTGAA AAAGACCAAAGGATA Ctha_1997 2381064 - 2381411 + | ribosomal protein L20 TERM 3386 2381415 - 2381427 + F 78 -5.5 -5.1104 | opp_overlap 2381415 GCAATGAATTAATAT TCGGC TTT GCTGA TTTTTATGTATCTTT TERM 3387 2381447 - 2381470 + F 91 -9.6 -5.00138 | TATGTATCTTTCATA GGCTTGTAAG ACAT CTTGCAGGCC TTTTTCATTTCGGTA Ctha_1998 2381817 - 2382839 + | phenylalanyl-tRNA synthetase, alpha subunit Ctha_1999 2382852 - 2383118 + | hypothetical protein TERM 3388 2383156 - 2383133 - f 100 -12.5 -5.64421 | opp_overlap 2383133 AGCTGAAATAAAAAA GGGACTCAC TACCTC GTGAGTCCC TTTGACCAACCAAAC TERM 3389 2383133 - 2383156 + F 95 -12.5 -3.53012 | opp_overlap 2383133 AGCTGAAATAAAAAA GGGACTCAC TACCTC GTGAGTCCC TTTGACCAACCAAAC TERM 3390 2383275 - 2383286 + F 70 -3 -5.11937 | opp_overlap 2383269 TATAATTAACACTTA CAAA GCGC TTTG TTTTTTCGGCTTGTT TERM 3391 2384245 - 2384235 - g 73 -4.6 -4.85599 | overlap 2384236 GCGAGCGGACAAAAA GGCA TGG CGCC CGATGCGAAAATTAT TERM 3392 2384615 - 2384627 + G 72 -10.5 -2.92668 | overlap 2384614 ATACTTGATTGCGCC CGGCG GCT CGCCG ATTTATGGCCCGTTT TERM 3393 2385789 - 2385773 - g 79 -7.9 -4.50122 | CGAGAGAAAAAAAGA GGGCGAA ACT TACGCCC AAATTTCAGATTTTA Ctha_2000 2383479 - 2386268 + | peptidase S8 and S53 subtilisin kexin sedolisin Ctha_2001 2386265 - 2387140 + | ribosomal L11 methyltransferase TERM 3394 2387188 - 2387158 - T 91 -10.6 -4.81249 | gap 1, opp_overlap 2387158 TGTTAAACTCAAAAA CGTAGAGCTGTCA ATATTG TG-CAGCTCTACG TTTAGAAAATTACTC TERM 3395 2387158 - 2387188 + T 83 -11.3 -3.58037 | gap 1, opp_overlap 2387158 TGTTAAACTCAAAAA CGTAGAGCTGT-CA ATAT TGTGCAGCTCTACG TTTAGAAAATTACTC Ctha_2003 2388299 - 2387940 - | hypothetical protein TERM 3396 2388321 - 2388331 + r 80 -2.6 -5.67063 | GGTTATTGCTACCAG TAAA AAA TTTA TTTTTTTCTGATAAA Ctha_2004 2389424 - 2388453 - | hypothetical protein TERM 3397 2388856 - 2388821 - G 83 -9.9 -4.06419 | overlap 2388799 2388843 CGGCTTGAGAAACAA CAGCAGCAATAAC ATAGACAAGG GTTACTGCTGCTG CAACAGCTTCCGGTT Ctha_2005 2389755 - 2389426 - | hypothetical protein TERM 3398 2390973 - 2390983 + r 78 -5.4 -5.08831 | TCATGGCGTTGCTCT CCTT TAA AAGG TTGTTTTTTTTATTG TERM 3399 2391278 - 2391245 - R 70 -8.3 -3.33922 | opp_overlap 2391250, overlap 2391250 AGCGGCTTCAAAAAG CAAAAGAGCATACCA TTTG CGATATGCTCTTTTC TCAACAGTTAGAATG TERM 3400 2391273 - 2391250 - R 87 -8.2 -4.77757 | opp_overlap 2391250, overlap 2391245 CTTCAAAAAGCAAAA GAGCATACCA TTTG CGATATGCTC TTTTCTCAACAGTTA Ctha_2007 2391702 - 2391322 - | hypothetical protein TERM 3401 2391948 - 2391936 - g 80 -5.5 -4.94168 | AGATAAGAAAAGAAA CTGCC GCA GACAG TGACGCGATCACAAC Ctha_2008 2391917 - 2392417 + | GCN5-related N-acetyltransferase TERM 3402 2392765 - 2392783 + G 88 -12.4 -3.53012 | overlap 2392773 TGCCGTCAACGGCGA CGAGTCCG AGC CGGGCTCG TTTAAAGACCGGCAG TERM 3403 2393217 - 2393205 - g 72 -4.8 -4.66163 | AGGCGTATTCAAAAA TCGG CGCAC CCGA TCATCCCGGCCCAAT TERM 3404 2393467 - 2393441 - g 78 -5.1 -5.04385 | GATAGCCTCAAAAAA GCCGGCACGT-CC ATC GGCACG-GCAGGC ATGATTATCATGGAC Ctha_2009 2392517 - 2393815 + | NADH-quinone oxidoreductase, F subunit TERM 3405 2394020 - 2393998 - g 93 -13.6 -3.63569 | opp_overlap 2393996 CGAATTTTGGAAGAA CGCTTGAAAT CAG ATTTCAAGCG CATGATTGAGGACAC Ctha_2010 2393815 - 2394159 + | hypothetical protein TERM 3406 2394317 - 2394331 + G 82 -5.6 -5.22006 | opp_overlap 2394316 2394317 CGGCGGCAAGCAAAT CGTGGA TAT TCCTCG TTTTTGTTATCATCC TERM 3407 2394736 - 2394770 + G 85 -7.1 -5.02476 | AAATCGTCTTTGACG GCGAACGCTGCAT CAATTGCAC ACGCTGCGTTCGC TTTTTTGACGAATAT TERM 3408 2395182 - 2395154 - g 72 -8.1 -3.6834 | AATAAAAGTCGGAAA CGCTCAGCAAACC GCC GATTGGCCGAACG CAATTCAAAAAGCCG TERM 3409 2395214 - 2395194 - g 84 -7.6 -4.75776 | gap 1, overlap 2395195 2395196 AACGCAATTCAAAAA GCCGCCGAA TTGC TTCGGCG-C TACCGACCGGATGAA TERM 3410 2395213 - 2395196 - g 73 -11.3 -2.65906 | overlap 2395194 2395195 CGCAATTCAAAAAGC CGCCGAA TTGC TTCGGCG CTACCGACCGGATGA Ctha_2011 2394219 - 2395967 + | NADH dehydrogenase TERM 3411 2396250 - 2396264 + T 72 -5.6 -4.56775 | TTCATTTCCATCATT TCAGCG CTT CGCGGA TTTTTACGGACAGCT Ctha_2012 2398641 - 2396245 - | PAS/PAC sensor hybrid histidine kinase TERM 3412 2398296 - 2398314 + g 82 -7.4 -4.72333 | CCCATTCAAATATTT GCGGCT CACCCAT AGCCGC TTTTTGAATGTACTT Ctha_2013 2399749 - 2399063 - | molybdate ABC transporter, inner membrane subunit TERM 3413 2399483 - 2399473 - G 71 -6.8 -4.19238 | CGCCGAAGTTGAAAA CGAG TCG CTCG CCAAACGCGGCTTCA Ctha_2014 2400534 - 2399749 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 3414 2400411 - 2400444 + g 80 -6 -5.055 | gap 1, opp_overlap 2400406 CAATCAAATAGCTCA GATTTGCTGCTGCCG CAATT CGG-AGCGGCGCATC TTTTTTGGCGCTTCC Ctha_2015 2401418 - 2400537 - | ABC transporter-related protein TERM 3415 2400835 - 2400862 + g 71 -10.7 -2.7556 | opp_overlap 2400833 2400834, overlap 2400833 GCGAGCTTAAACACT TCTTGCTTGTC GTGCGA GACAAGCAAGG TCGTTAGCTGAAATT Ctha_2016 2401993 - 2401505 - | TOBE domain protein TERM 3416 2402371 - 2402349 - g 74 -5.6 -4.63932 | CACGCTCGAACAAAA TTTGCCCG CGATTAT CGAGCAAA CCAAGCCCGATTTTC TERM 3417 2403080 - 2403070 - g 74 -6.8 -4.25283 | ATGGGTTTAGGAAAA GCGA TCG TCGC CTCAGGCGTGGGGCA Ctha_2017 2402110 - 2403318 + | glycosyl transferase group 1 Ctha_2018 2403315 - 2404394 + | glycosyl transferase group 1 TERM 3418 2405319 - 2405331 + G 85 -6.2 -5.10208 | CAATTTGCACTGAGC GGCC TGAGT GGCC TTTTTCTTGCGCTTA Ctha_2019 2404395 - 2405660 + | polysaccharide biosynthesis protein Ctha_2020 2405704 - 2406291 + | Methyltransferase type 11 Ctha_2021 2406386 - 2406580 + | hypothetical protein Ctha_2022 2406649 - 2408349 + | Heparinase II/III family protein TERM 3419 2409015 - 2409004 - g 74 -3.6 -5.07652 | overlap 2409006 TTTCTTAAAATAAAA GCCA CGTC CGGC GACTTGCAAAAAACG TERM 3420 2409488 - 2409499 + G 80 -5.8 -5.03314 | TGCAGGTGGGCGAAG GCTC GGAC GAGC TTTTTTCCGGCTACA TERM 3421 2409863 - 2409852 - g 78 -5.8 -4.74103 | opp_overlap 2409851 TGTGGAATTGAAAAA TCGC CTGA GCGA GCTATTACTTATGCG TERM 3422 2410074 - 2410060 - g 74 -3.4 -5.05782 | ATTTATCGCAAAAAA CAGGGC TTT GCCGCG CCGATTCCCGAATGG Ctha_2023 2408359 - 2410278 + | asparagine synthase (glutamine-hydrolyzing) Ctha_2024 2410506 - 2410871 + | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 TERM 3423 2410983 - 2410957 - f 73 -4.4 -4.97159 | opp_overlap 2410963, overlap 2410959 AAAAAGAAAAAATAA CAGTAAGGTTGA AGT TCATCCTTTCTA AAACTAAGCAGAGGT TERM 3424 2411568 - 2411558 - g 90 -6.8 -5.27938 | ATCGCCAAAGAAAAA GGCT TGG AGCC GCTCGCAGAATTTAT TERM 3425 2412506 - 2412531 + G 72 -8.9 -3.55563 | TTGGATGTGAGTGTG CGCGGCGCGGT GAGC ATTGCGCGGCG TTTGCAAGATCCGCT TERM 3426 2412992 - 2412975 - g 71 -7.1 -4.09685 | CGTTAGGTTCTAAAA TCAAATC GGTT GATTTGA AAAAATATGTGACCG Ctha_2025 2411201 - 2413477 + | RNA binding S1 domain protein TERM 3427 2413518 - 2413546 + F 100 -11.8 -4.87665 | opp_overlap 2413519, overlap 2413519 TGCCATAGTTTCAAT ATTCGGGGCAAA AGAAC TTTGCCCCGAAC TTTTTCTAACTAAAA TERM 3428 2413519 - 2413545 + F 100 -15.3 -3.52117 | opp_overlap 2413519, overlap 2413518 GCCATAGTTTCAATA TTCGGGGCAAA AGAAC TTTGCCCCGAA CTTTTTCTAACTAAA TERM 3429 2413545 - 2413519 - f 100 -16 -3.05343 | opp_overlap 2413519 2413518 GCCATAGTTTCAATA TTCGGGGCAAAA GAA CTTTGCCCCGAA CTTTTTCTAACTAAA TERM 3430 2413641 - 2413655 + G 80 -5.7 -4.94962 | TTGCTATTTCGGTTG CCATC TCGCT GATGG TTTTCTTTCGGTTAT Ctha_2026 2413571 - 2414617 + | MscS Mechanosensitive ion channel Ctha_2027 2416993 - 2414699 - | TonB-dependent receptor TERM 3431 2415606 - 2415588 - G 77 -8.8 -3.93367 | CTTTGCAAGAAAATA GCAAAGCC TTT GGCTGTGC GCGTGGAGTCGGAGT TERM 3432 2416006 - 2415991 - G 70 -2.4 -5.03314 | opp_overlap 2416003, overlap 2415976 GCGATTTTGAAAAAA GCCGCC ATTT GCCAGC ATCGCCGTTTTCGCG TERM 3433 2416636 - 2416652 + g 74 -8.1 -3.92869 | TTTCGGTGATGGTGT CGTTTTT GAT AAAAACG TTTCTAAATAAATCC TERM 3434 2416757 - 2416777 + g 72 -9.1 -3.60792 | AGAATCAGTTCGCGC TTGAATGGT CGT GCCATTCAA TTTAACGGTTGCGCC Ctha_2028 2417614 - 2417048 - | ferric uptake regulator, Fur family TERM 3435 2417408 - 2417392 - G 84 -5.1 -5.42259 | opp_overlap 2417392 TCAGGTTCAAAAAAA TTTGGTC AGC GTCCAAA TGTTCCGATGACGTA TERM 3436 2417739 - 2417702 - H 71 -4 -4.90296 | opp_overlap 2417703 2417705 2417706, overlap 2417703 AAAATCGTAGAAAAA TCACGCGTTTGGTGGC GCTTTT GCAAGCAAGCGCGTGT GTTGGAAAGAGCGCG TERM 3437 2417703 - 2417738 + H 77 -10.4 -3.01712 | opp_overlap 2417702 2417703, overlap 2417705 2417706 AAATCGTAGAAAAAT CACGCGTTTGGTGGCG CTTT TGCAAGCAAGCGCGTG TGTTGGAAAGAGCGC Ctha_2029 2417942 - 2419024 + | hypothetical protein TERM 3438 2419041 - 2419088 + T 79 -6.5 -4.83593 | TCGTCTTTTTAAGAG GGCTGTTTTGTC-CATCAACACG CGGG CGTTTTGATGCGATGAG-CAGCC TTTTTCCTAATTGTT Ctha_2030 2420281 - 2419112 - | hypothetical protein Ctha_2031 2421082 - 2420360 - | LmbE family protein Ctha_2032 2421383 - 2421138 - | hypothetical protein TERM 3439 2421489 - 2421454 - R 76 -4.1 -5.21683 | gap 2, overlap 2421456 ATCGAAAAAAAGAAA TGGCGCTTTAAGCGTGA GCGC TC-CGCCT-AAGCGCAA GTGTGTTGGCAGCCA Ctha_2033 2422635 - 2421430 - | hypothetical protein Ctha_2034 2423668 - 2422676 - | bacteriochlorophyll/chlorophyll synthetase Ctha_2035 2424839 - 2423805 - | anthranilate phosphoribosyltransferase TERM 3440 2423969 - 2423982 + g 73 -4.5 -4.84017 | CCACTGCATCTTCTC TGGCT TCTG GGCCA TTTTTATCAAGAATT TERM 3441 2424672 - 2424656 - G 73 -7.9 -4.07885 | opp_overlap 2424656 CAGCGTGGTTTAAAA TCGCGCG CGC CGCGCCA TAAATTTCCTCAACT Ctha_2036 2426017 - 2424836 - | aminotransferase class V TERM 3442 2425161 - 2425141 - G 78 -6.1 -4.58283 | CAATTTCGCGAAAAA GCCCAAACG CTT CATTCAGGC CGATAATGCCCATCC Ctha_2037 2426349 - 2426059 - | Antibiotic biosynthesis monooxygenase TERM 3443 2426589 - 2426600 + H 100 -2.2 -6.06723 | TTCAGGTTTTGGCTT CTGA AGAG TCGG TTTTTTTTTGAAAAA TERM 3444 2426798 - 2426816 + G 72 -8.8 -3.5393 | opp_overlap 2426802, overlap 2426799 TCCGTCAGGTTTTTA ACGACTGG TTG CCAGTCGA TTTGGCGGAACTGAT TERM 3445 2426799 - 2426815 + G 78 -12.3 -2.72144 | opp_overlap 2426802, overlap 2426798 CCGTCAGGTTTTTAA CGACTGG TTG CCAGTCG ATTTGGCGGAACTGA TERM 3446 2428061 - 2428075 + G 83 -10 -4.0896 | opp_overlap 2428056 TTATTATATACTTCA CCGTTG CCG CAACGG TTTTGAAAGGCATTT Ctha_2038 2426719 - 2428098 + | magnesium transporter TERM 3447 2428485 - 2428468 - g 77 -3.4 -5.10933 | opp_overlap 2428472 TGAGGCAAAAGAAAA GCATCC TGAAGC GGATAC GCTGGGGGTGATTTC Ctha_2039 2428298 - 2429191 + | hypothetical protein TERM 3448 2429667 - 2429682 + G 74 -3.3 -4.94811 | CATGGTCAATTAGTG TAGAG TTCTTT CTCTA TTTATTTGTTTTTCC Ctha_2040 2429243 - 2430319 + | acyltransferase 3 Ctha_2041 2431100 - 2430291 - | phosphomethylpyrimidine kinase Ctha_2042 2431805 - 2431167 - | thiamine-phosphate pyrophosphorylase Ctha_2043 2432425 - 2431802 - | Thiamine-phosphate diphosphorylase TERM 3449 2432006 - 2431948 - G 74 -5.8 -4.62069 | opp_overlap 2431955 2431993 CGCCGACGGCAAAAA CGGGAATCTGCACGGCTTGGCAAAGC GATTCGA GTTCGGCCAAGCCGCGCGGTTTTGCG TCGTTCGGTTTGGAG TERM 3450 2431955 - 2431999 + g 87 -9.9 -4.23892 | opp_overlap 2431948, overlap 2431993 GGCAAAAACGGGAAT CTGCACGGCTTGGCAAAGC GATTCGA GTTCGGCCAAGCCGCGCGG TTTTGCGTCGTTCGG TERM 3451 2432481 - 2432514 + H 70 -2.6 -5.10077 | CGCCTTGATTTAGAT GGTTTTTTATTTCT GTTCAG ACAGATAAAAAGCC TTTTTTGAAATGTTT Ctha_2044 2432595 - 2432816 + | hypothetical protein TERM 3452 2432937 - 2432921 - g 79 -2.1 -5.55769 | CTTTACAAGAAAAAA CGGGCTG TAT CAGTACG CAAGTCATTCAAGAG Ctha_2045 2432806 - 2433237 + | PilT protein domain protein TERM 3453 2433540 - 2433564 + T 89 -10 -4.4448 | opp_overlap 2433543, overlap 2433543 CTGTTGTGATTAGAG AAAGCCGCCT CAATC AGGCGGCTTG TTTATTTCCAAATTT TERM 3454 2433561 - 2433543 - T 90 -11.7 -4.08706 | opp_overlap 2433540 2433543 TTGTGATTAGAGAAA GCCGCCT CAATC AGGCGGC TTGTTTATTTCCAAA TERM 3455 2433543 - 2433561 + T 93 -11.7 -4.32678 | opp_overlap 2433543, overlap 2433540 TTGTGATTAGAGAAA GCCGCCT CAATC AGGCGGC TTGTTTATTTCCAAA Ctha_2046 2434368 - 2433589 - | thiazole biosynthesis family protein Ctha_2047 2434845 - 2434636 - | thiamine biosynthesis protein ThiS Ctha_2048 2435985 - 2434858 - | glycine oxidase ThiO TERM 3456 2435136 - 2435150 + g 73 -11.4 -2.62515 | opp_overlap 2435136 AAATGTCGCGGAAAA CGCCGA TGG TCGGCG TCGTGTGAAAGCCTT TERM 3457 2435150 - 2435136 - G 89 -11.4 -4.0896 | opp_overlap 2435136 AAATGTCGCGGAAAA CGCCGA TGG TCGGCG TCGTGTGAAAGCCTT TERM 3458 2436060 - 2436016 - R 100 -15.1 -5.26875 | opp_overlap 2436016 TGGTTAACGAAAAAA GCCGTTTTCCCGTCAAGGTGG AGA CCAACTCAATAGGAAAACGGC TTTTGAAGAAAATCA TERM 3459 2436016 - 2436060 + r 85 -10.7 -4.08216 | opp_overlap 2436016 TGGTTAACGAAAAAA GCCGTTTTCCCGTCAAGGTGG AGA CCAACTCAATAGGAAAACGGC TTTTGAAGAAAATCA Ctha_2049 2436838 - 2436317 - | hypothetical protein Ctha_2050 2439530 - 2436909 - | TonB-dependent receptor plug TERM 3460 2438443 - 2438461 + g 72 -8.2 -3.65991 | TAGTGCCAAGCCGCG CCGAAAAC ATC GTTTTTGG TTGTGTTGCCGAGAT TERM 3461 2439135 - 2439149 + g 83 -9.2 -4.36914 | GGTGCGCGGATCTTC GGGCGC TTG GCGCTC TTTTGTGGCGACAAC Ctha_2051 2440076 - 2440384 + | Excinuclease ABC C subunit domain protein TERM 3462 2440599 - 2440617 + T 100 -8.9 -5.252 | CTCTAACAGTGAAGC GGGCTTT TTTCT AAAGCCC TTTTTTGTACAAATA Ctha_2052 2441307 - 2440609 - | glutamine amidotransferase class-I Ctha_2053 2441572 - 2444544 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 3463 2444585 - 2444559 - T 100 -13.8 -3.79445 | AAGTAGGAATGCAAA CGCGTGAAGC GGGGCAA GCTTCACGCG CTGCTAAAATTCATG Ctha_2054 2446879 - 2444684 - | metal dependent phosphohydrolase TERM 3464 2445037 - 2445011 - G 79 -2.9 -5.33405 | overlap 2445013 TTTATCAAAGAAAAA CTGCATAACGG ATGTG CCATGATGCTG CGGGATAAAATCCAA TERM 3465 2445587 - 2445568 - G 71 -3.6 -4.86033 | opp_overlap 2445568 AAACGGTTAGAAAAA TTTGCG TGCGTTGG CGCAAA TCCTTGATGACAAAA TERM 3466 2446974 - 2446988 + H 89 -10 -4.38927 | AAATCAGGTAATGGG CAAGCC ATC GGCTTG TTTCTTGTCTGCGCC TERM 3467 2447168 - 2447126 - g 72 -5.1 -4.67234 | opp_overlap 2447150, overlap 2447133 ATGTAATGCTAAAAA CCATA-AACCTGAACAGCCGA TTT TCAACT-TTCAGGTTGTTTGG GAAGAACTACTTGCC TERM 3468 2447160 - 2447133 - g 72 -6.4 -4.2687 | gap 1, opp_overlap 2447150, overlap 2447126 GCTAAAAACCATAAA CCTGAACAGCCGA TTT TCAACT-TTCAGG TTGTTTGGGAAGAAC TERM 3469 2447188 - 2447205 + G 90 -9.9 -4.42806 | AACTACTTGCCGATA CGGAAAC GCCG GTTTCCG TTTATTTAAAGCTGC TERM 3470 2448409 - 2448389 - g 78 -5.3 -4.99043 | opp_overlap 2448402 GCTTGAGAAAGAAAA GCGCGGC ATTTATG GCGGCGC TGTCGGCTATTTTGA Ctha_2055 2447097 - 2448608 + | anthranilate synthase component I TERM 3471 2448671 - 2448642 - f 79 -10.9 -3.02434 | opp_overlap 2448642, overlap 2448639 2448645 ATCGTAATGAAATCA GAACTTTATTTCC CTGA GGAAGTAAAGTTC TTTTTTTTTACATCA TERM 3472 2448642 - 2448671 + F 100 -13.1 -6.11644 | opp_overlap 2448642 2448639 2448645 ATCGTAATGAAATCA GAACTTTATTTCC CTGA GGAAGTAAAGTTC TTTTTTTTTACATCA Ctha_2056 2448725 - 2450257 + | protease Do TERM 3473 2450298 - 2450317 + T 93 -10.7 -4.90266 | opp_overlap 2450298 GATTTTTTGAGAAAA CGGCGCT CCCAAA AGCGCCG TTTTTAGTTAGTAAC TERM 3474 2450317 - 2450298 - T 100 -11.4 -4.3739 | opp_overlap 2450298 GATTTTTTGAGAAAA CGGCGCTC CCAA AAGCGCCG TTTTTAGTTAGTAAC Ctha_2057 2452139 - 2450325 - | diguanylate cyclase and serine/threonine protein kinase with TPR repeats TERM 3475 2450581 - 2450559 - G 87 -7 -5.21459 | AAAAAGAAAAACAAA TTCCTCGCCA CCA TAGCGAGCAA CTAAATCCACCGATC TERM 3476 2450835 - 2450857 + g 84 -7.8 -4.73864 | TGCTTCGGCTTGTTC GCGAAGTTTT TCC AAAAGTTCGC TTTTCTGTTGATTGG Ctha_2058 2452999 - 2452361 - | hypothetical protein TERM 3477 2453104 - 2453088 - R 71 -6.5 -4.07568 | opp_overlap 2453091 TGGCTGCGTCTAAAA GCCGG CGAGCTT CCGGC AGCCCGAGTCGCTCG TERM 3478 2453091 - 2453121 + r 88 -8.9 -4.74103 | gap 1, opp_overlap 2453088 CTGCGTCTAAAAGCC GGCGAGCTTC-CGG CAGC CCGAGTCGCTCGCC TTTTTCGATTGACGC Ctha_2059 2454313 - 2453180 - | hypothetical protein TERM 3479 2453288 - 2453299 + g 77 -3.6 -5.14563 | opp_overlap 2453273 CCAGCTTAGCTCGCT GGCG TTGA TGCC TTTTTTAATGCCGAC TERM 3480 2453521 - 2453507 - G 77 -7.1 -4.41895 | opp_overlap 2453508 AAGGCTCAAGGAAAA GGCGA CAGGC TCGCC AGCGCTATTTTCAAC TERM 3481 2453931 - 2453953 + g 73 -4.1 -4.8622 | gap 2, overlap 2453950 ATTGATGGGCTAATC GGGC-CG-CGC ATG GCGTTGAGCCC TTTTTGCTTGAGCCA TERM 3482 2454396 - 2454406 + r 79 -6.8 -4.72201 | opp_overlap 2454395 2454396 TGAACTGCTTAAAAT CGCA GTC TGCG TTATTTTTTATCGGA Ctha_2060 2455459 - 2454407 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3483 2454938 - 2454928 - G 72 -8.2 -3.68506 | opp_overlap 2454928 2454927 2454937, overlap 2454918 CAACAGGCATGGAAA GGCC GCT GGCC ATTTCGCGATGGGTT TERM 3484 2457987 - 2458005 + G 76 -2.4 -5.4505 | gap 1 CGGGCTGACGGAGTT TGCCAGC CCTGAT GC-GGCA TTTTTTATTCGCAAC Ctha_2061 2455798 - 2458596 + | polysaccharide export protein TERM 3485 2458727 - 2458739 + G 78 -6.3 -4.65584 | GTTACTTTATTTGTT CAGTT TTT AACTG TTTTATATGCTTTAT Ctha_2062 2458637 - 2459392 + | lipopolysaccharide biosynthesis protein TERM 3486 2459893 - 2459905 + G 100 -3.4 -6.24157 | TCTTGCTTTTGTGTC TGCA TCGGT TGCA TTTTTTTTTATGGAT Ctha_2063 2459564 - 2460613 + | glycosyl transferase family 4 Ctha_2064 2460642 - 2461535 + | glucose-1-phosphate thymidylyltransferase TERM 3487 2461593 - 2461621 + G 76 -4.5 -5.06414 | overlap 2461595 TTATCACAGGTGTTA CAGGGCAAGATGG AAG TTATCTTGCCGAG TTTTTATTAGAAAAA Ctha_2065 2461565 - 2462692 + | GDP-mannose 4,6-dehydratase Ctha_2066 2462685 - 2463656 + | NAD-dependent epimerase/dehydratase TERM 3488 2463721 - 2463696 - f 79 -10.5 -3.28447 | opp_overlap 2463696, overlap 2463694 TTATTTAGTATAATA GCCGTAAAACA ACTT TGTTATACGGC TTTTTTTATTAAAAA TERM 3489 2463696 - 2463721 + F 100 -10.5 -5.7946 | opp_overlap 2463696 2463694 TTATTTAGTATAATA GCCGTAAAACA ACTT TGTTATACGGC TTTTTTTATTAAAAA TERM 3490 2463814 - 2463788 - g 82 -6.8 -4.85618 | opp_overlap 2463787 2463788 AAATAATCAAGAAAA GAAAAAAATTTT AGC AAATTTTTTTTC CTTATTTTTATTGCA TERM 3491 2464030 - 2464014 - g 85 -3.8 -5.59962 | opp_overlap 2464014 GAAAATAAAGAAAAA CTAAAA GAAAT TTTTAG TTCAGTAATGATTAT TERM 3492 2464710 - 2464722 + G 82 -2.7 -5.45813 | CTGTTTTCTTATTCT GATTT TTT AAGTC TTTTGTTTTTTGGTG Ctha_2067 2463753 - 2465003 + | polysaccharide biosynthesis protein Ctha_2068 2465013 - 2466011 + | glycosyl transferase family 2 Ctha_2069 2466032 - 2466802 + | glycosyltransferase TERM 3493 2466962 - 2466984 + GF 100 -8.6 -5.75342 | GGAACCAACGTTTTG GATTATTCGT TAT ATGAATAATC TTTTTTTTCAAGGAA TERM 3494 2467156 - 2467167 + GF 72 -3 -5.09173 | TACGAGCAGGAGTTG CAAT CGGT ATTG TTTTTTGGGCTATTA TERM 3495 2467384 - 2467400 + GF 70 -2.1 -5.00895 | overlap 2467386 CTACACAATATCTTG CCTCGGT ACT GCCGGAG TTTTTATCTGCTAAG TERM 3496 2467401 - 2467422 + GF 72 -3.1 -4.94811 | overlap 2467412 TCGGTACTGCCGGAG TTTTTATCT GCTA AGTTAAAAA TTTATTTGTTTTTAA TERM 3497 2467412 - 2467426 + GF 70 -2.2 -4.91852 | overlap 2467401 GGAGTTTTTATCTGC TAAGTT AAA AATTTA TTTGTTTTTAATGAA Ctha_2070 2466768 - 2467790 + | hypothetical protein TERM 3498 2468026 - 2468012 - g 93 -7.2 -5.64274 | opp_overlap 2468012 GTAGGGATAAAAAAA TCCATT AAG AATGGA TCTGATTATGTTCTT Ctha_2071 2467793 - 2468668 + | glycosyl transferase family 2 TERM 3499 2468763 - 2468777 + G 72 -5.8 -4.46587 | opp_overlap 2468763 2468762 GTTGGATGCTAAAAT TTATCT TTT AGATAA TTCTTTTGTTGATGA TERM 3500 2469388 - 2469423 + G 89 -6.4 -5.32944 | gap 1, overlap 2469391 TTAATGTATCATATT CGATCCGCTATTTATTA CTT TAATAAATGG-GGATGG TTTTTTGATTCTGAA Ctha_2072 2468665 - 2469486 + | glycosyl transferase family 2 TERM 3501 2469569 - 2469579 + F 88 -6.8 -5.28481 | GGCTGCTTTTTTGAT TCCC TAT GGGA TTTTTTGATTAAATC TERM 3502 2469641 - 2469681 + F 70 -2.5 -5.17507 | overlap 2469651 2469680 AAATGAAATATACAG TGCGCTATTTTCCACAA GGTTTTA TTGTGGATTTTGGCGCG TTTTTATTCGATTTT Ctha_2073 2469834 - 2470913 + | magnesium chelatase ATPase subunit I Ctha_2074 2470910 - 2472763 + | magnesium chelatase ATPase subunit D TERM 3503 2472800 - 2472823 + T 100 -12.5 -6.06723 | opp_overlap 2472800 2472818 CAGGTCAGATATAAA GAGACGCTC GATAAA GAGCGTCTC TTTTTTTTTCGACAA TERM 3504 2472823 - 2472800 - T 100 -12.5 -4.13246 | opp_overlap 2472800, overlap 2472818 CAGGTCAGATATAAA GAGACGCTC GATAAA GAGCGTCTC TTTTTTTTTCGACAA TERM 3505 2472864 - 2472844 - T 100 -14.1 -5.60993 | overlap 2472818 TTTTCGACAAAAAAA GGCGGAATA AAA TATTCCGCC TCATGAAATTGTATG Ctha_2075 2474782 - 2472905 - | GLUG domain protein TERM 3506 2478565 - 2478547 - g 82 -7.4 -4.55798 | CATTGTAAATGAAAA TGCAATGC TTC GCATGGCA AGTGGTTCGCAGATA TERM 3507 2486695 - 2486679 - g 70 -5.1 -4.4078 | opp_overlap 2486679 TGTCGGGAACGAAAA CTGTGTT GGA AACGCAG TCAATTACTCGGCCA Ctha_2076 2475140 - 2486974 + | Haemagluttinin repeat-containing protein TERM 3508 2486996 - 2487032 + T 100 -19.7 -5.25803 | opp_overlap 2486985 2487001, overlap 2487001 GGAAGCCTTGTCGTT AAAAAGGCCTTGAAGGA ATC TCCTTCAAGGCCTTTTC TTTTTTATAAAAATT TERM 3509 2487027 - 2487001 - T 100 -19.6 -4.56597 | opp_overlap 2486996 2487001, overlap 2486985 CCTTGTCGTTAAAAA GGCCTTGAAGGA ATC TCCTTCAAGGCC TTTTCTTTTTTATAA TERM 3510 2487001 - 2487027 + T 100 -19.6 -5.49579 | opp_overlap 2486985 2487001, overlap 2486996 CCTTGTCGTTAAAAA GGCCTTGAAGGA ATC TCCTTCAAGGCC TTTTCTTTTTTATAA Ctha_2077 2487740 - 2487075 - | riboflavin synthase, alpha subunit Ctha_2078 2488873 - 2487767 - | riboflavin biosynthesis protein RibD TERM 3511 2488353 - 2488371 + g 76 -8.1 -4.13767 | GTAATCCACTTTGAA TCGCCGC TCGTT GTGGCGA TTTTGCCGTCGAGCG Ctha_2079 2489860 - 2488901 - | hypothetical protein Ctha_2080 2490396 - 2489857 - | CMP/dCMP deaminase zinc-binding TERM 3512 2490096 - 2490118 + g 83 -9.2 -4.29396 | TAATGGCGTTCATTT CCGCATGAAT CGT ATTCATGCAG TTTTGCTCGATGGTT Ctha_2081 2491135 - 2490401 - | protein of unknown function DUF547 TERM 3513 2490569 - 2490559 - G 73 -4 -4.90266 | overlap 2490561 TGTACCAATCAAAAA TCTT GGA AAGA TAAAGCGTTTTTCCT TERM 3514 2491042 - 2491054 + g 83 -4.1 -5.40474 | TGTAATTCACCTTGC CGTGT TTT ACATG TTTTTTTAAAACCCT TERM 3515 2492464 - 2492454 - g 80 -6.8 -4.61633 | opp_overlap 2492460 AGAGATTTTCAAAAA TGGC ATC GCCA AAATCTTTCGCGTTT Ctha_2082 2491230 - 2492879 + | protein of unknown function DUF814 Ctha_2083 2493154 - 2492900 - | hypothetical protein TERM 3516 2493245 - 2493189 - R 88 -6.6 -5.27476 | overlap 2493190 GTTAAGAAAAGAAAA CTTCGACTTCGCACAGCGCACT GAAAAAAAACAAT AGCGCTCAGGGCGAAGTCGAAA AGCTGCGGCGTAGAT TERM 3517 2493244 - 2493190 - R 72 -7.9 -3.74859 | overlap 2493189 TTAAGAAAAGAAAAC TTCGACTTCGCACAGCGCACT GAAAAAAAACAAT AGCGCTCAGGGCGAAGTCGAA AAGCTGCGGCGTAGA Ctha_2084 2495096 - 2493273 - | AMP-dependent synthetase and ligase TERM 3518 2493607 - 2493591 - G 71 -3.6 -4.87291 | overlap 2493593 CAGCGCAATTAAAAA TGGGCG CTTTT CGCCAA CAACCAAAGCTTGAT TERM 3519 2494060 - 2494047 - G 76 -2.3 -5.4251 | opp_overlap 2494058, overlap 2494049 GCCAGAGACAAAAAA GCGCA GCCG TCCGC CAAAGCGTTCGCGAA TERM 3520 2494483 - 2494499 + g 72 -6.5 -4.35926 | overlap 2494484 TCGCAAATGTTTCGG TGCGTGA GCA TCACGCC TTTTGGATTTCCGGT TERM 3521 2494484 - 2494498 + g 71 -10 -3.20832 | overlap 2494483 CGCAAATGTTTCGGT GCGTGA GCA TCACGC CTTTTGGATTTCCGG TERM 3522 2494688 - 2494698 + g 79 -4.6 -5.21709 | overlap 2494683 TAAGCGTTTTGAGCT CGGG CAG CTCG TTTTTTACTCTGCGA Ctha_2085 2495294 - 2496559 + | hypothetical protein Ctha_2086 2496650 - 2497705 + | hypothetical protein Ctha_2087 2497722 - 2498798 + | hypothetical protein TERM 3523 2498890 - 2498913 + G 79 -11.8 -3.22448 | overlap 2498900 ACCTCTTTTGGTTAG GCAGCTTGAG CGGA TTCAAGCTGC TTCCGTTCCGTTTCA Ctha_2088 2498795 - 2499598 + | acylneuraminate cytidylyltransferase Ctha_2089 2499624 - 2500481 + | Transketolase domain protein Ctha_2090 2500512 - 2501432 + | Transketolase central region TERM 3524 2501495 - 2501545 + F 87 -8.3 -4.81249 | gap 2, opp_overlap 2501504 2501523, overlap 2501496 AATCGAGTTGAGCGG ACACGAC-A-ATGTAGGGGCGGGTT TAA AACCCGCCCCTACAGATAGGCGAGA TTTTTCCATTTGCCA TERM 3525 2501496 - 2501544 + F 85 -11.8 -3.48026 | gap 2, opp_overlap 2501504 2501523, overlap 2501495 ATCGAGTTGAGCGGA CACGAC-A-ATGTAGGGGCGGGTT TAA AACCCGCCCCTACAGATAGGCGAG ATTTTTCCATTTGCC TERM 3526 2501534 - 2501504 - f 100 -24.2 -3.47078 | opp_overlap 2501496 2501495, overlap 2501523 GAGCGGACACGACAA TGTAGGGGCGGGTT TAA AACCCGCCCCTACA GATAGGCGAGATTTT TERM 3527 2501851 - 2501841 - g 79 -8.2 -4.28254 | GGTCAATATGTAAAA GGCG TGG CGCC AAAGTTTGTGAAAAA Ctha_2091 2501709 - 2503049 + | aminotransferase class-III TERM 3528 2503108 - 2503077 - f 84 -11.8 -3.34787 | opp_overlap 2503082, overlap 2503082 AATAGGATTTGATAA TAAAAGGGATTCAA GGGA TTGAATCCCTTTTT TTTGGGGAATGCGTT TERM 3529 2503082 - 2503103 + F 100 -11.7 -5.75945 | opp_overlap 2503077 2503082 GATTTGATAATAAAA GGGATTCAA GGGA TTGAATCCC TTTTTTTTGGGGAAT TERM 3530 2503103 - 2503082 - f 100 -11.7 -4.78237 | opp_overlap 2503082, overlap 2503077 GATTTGATAATAAAA GGGATTCAA GGGA TTGAATCCC TTTTTTTTGGGGAAT Ctha_2092 2503160 - 2503387 + | hypothetical protein TERM 3531 2503530 - 2503552 + G 75 -2.6 -5.1166 | overlap 2503533 2503539 CAGCTCGATTTGCAA GTGCCTGACT AAA AATCGGGTGC TTTTTAATTTTGGTC Ctha_2093 2503399 - 2503587 + | hypothetical protein Ctha_2094 2503744 - 2504487 + | phosphoesterase PA-phosphatase related TERM 3532 2504557 - 2504535 - f 83 -9 -4.34267 | opp_overlap 2504535 GCATATAATGCAAAA GCGCCTGGCT GAA AGTCGGGCGC TTTTTTCATGATAGA TERM 3533 2504535 - 2504557 + F 100 -13.4 -5.1861 | opp_overlap 2504535 GCATATAATGCAAAA GCGCCTGGCT GAA AGTCGGGCGC TTTTTTCATGATAGA Ctha_2095 2504698 - 2505780 + | phosphoesterase RecJ domain protein TERM 3534 2506495 - 2506483 - g 75 -6.3 -4.39571 | TCGACAAAGCCAAAA TTGAG GAA CTCAA AATGGGCGGCTTGCT Ctha_2096 2505777 - 2507306 + | Leucyl aminopeptidase TERM 3535 2507354 - 2507385 + F 100 -16 -4.57474 | overlap 2507355 ACGTTTTTTGTCTAT TTCGTAGAGGCGCA AAAA TGCGTCTCTACGAG TTTTATGTAGCTTGA TERM 3536 2507355 - 2507384 + F 100 -17.3 -3.33761 | overlap 2507354 CGTTTTTTGTCTATT TCGTAGAGGCGCA AAAA TGCGTCTCTACGA GTTTTATGTAGCTTG Ctha_2097 2507767 - 2508471 + | hypothetical protein TERM 3537 2509430 - 2509401 - g 76 -4.1 -5.0133 | gap 1, opp_overlap 2509408, overlap 2509403 CATGGGCGGAAAAAA CCCCG-CTGCGCCG TGT CGGCACGGTCGATG ACATTGCTGGAATCG Ctha_2098 2508770 - 2509528 + | short-chain dehydrogenase/reductase SDR Ctha_2099 2509905 - 2510768 + | hypothetical protein Ctha_2100 2510787 - 2511728 + | hypothetical protein Ctha_2101 2512442 - 2511741 - | hypothetical protein TERM 3538 2512001 - 2511990 - G 74 -5.8 -4.62471 | opp_overlap 2511989 2511990, overlap 2511976 CGCAATTTTCAAAAA TCGC TCGA GCGA GTTTAAATCTACCTG TERM 3539 2512152 - 2512134 - G 72 -3.2 -5.00616 | TTGCGCTGTAAAAAA GAAAAC CTGTGGT GTTTTC AGTCGCGCGATGAGT Ctha_2102 2512743 - 2512925 + | ribosomal protein L33 TERM 3540 2512962 - 2512988 + F 100 -7.3 -6.17669 | gap 1 ACAAGTATCTTTATA GGGCGTGTATCA CTAT TGAAAC-CGCCC TTTTTTTATTTTATT TERM 3541 2514978 - 2515011 + G 73 -2.5 -5.09426 | gap 1, opp_overlap 2514978, overlap 2514981 AGTGTTGTTAAAAAA GCAGCGTCTCAATT CGGGCGA AATTGGG-CGCTAC TTTTTTGCCGTTCCC TERM 3542 2515011 - 2514978 - g 72 -3.2 -5.00884 | gap 1, opp_overlap 2514978 2514981 AGTGTTGTTAAAAAA GCAGCGTCTCAATTC GGGCG AAATTGGG-CGCTAC TTTTTTGCCGTTCCC TERM 3543 2515665 - 2515684 + G 81 -3.6 -5.40072 | CGGATTTGCCTTAGA CGATAAAG AAGA TTTTGTCG TTTTTTTGGCAAAAG Ctha_2103 2513014 - 2515902 + | peptidase S8 and S53 subtilisin kexin sedolisin Ctha_2104 2516149 - 2517468 + | hypothetical protein TERM 3544 2517514 - 2517480 - T 78 -10.9 -2.79518 | gap 1, opp_overlap 2517474, overlap 2517479 2517471 TTAAAACTTTCAAAT CT-GCGCTAAAATCAG CCGA CGGATTTTAGCGCCAG CTCGATGGTGTGAAG Ctha_2105 2518549 - 2517491 - | peptidase M14 carboxypeptidase A TERM 3545 2517747 - 2517736 - G 77 -7.2 -4.49556 | opp_overlap 2517744, overlap 2517737 CTGTGACCAAACAAA GCGG CGAG CCGC CGAGCGATTTCACGT TERM 3546 2517749 - 2517737 - G 74 -10.5 -3.29252 | opp_overlap 2517744, overlap 2517736 TGTGACCAAACAAAG CGGCG AGC CGCCG AGCGATTTCACGTAT Ctha_2106 2519671 - 2518634 - | ApbE family lipoprotein TERM 3547 2518932 - 2518919 - G 73 -2.3 -5.24129 | GTCTTTCATAAAAAA GCGTT CGTA ATCGC CGCTTGTGGAAATCG TERM 3548 2518997 - 2519018 + g 83 -9.5 -4.18197 | GCCCGGCGCTCTGGG GTGGCGAAT CCCG ATTTGCCAC TTTTCGGTCGCCGAT TERM 3549 2519413 - 2519371 - G 76 -8.5 -4.18018 | gap 2, opp_overlap 2519389 TTGCGCGAGCCAAAA GCCGGAAAGTTTCCGCGCCGA TTT TCA-CG-GGATGCTTTCCGGC AAAATCGTTGATTCG Ctha_2107 2520335 - 2519655 - | hypothetical protein Ctha_2108 2521621 - 2520374 - | hypothetical protein Ctha_2109 2521826 - 2521614 - | lipoprotein, putative Ctha_2110 2522316 - 2521849 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Ctha_2111 2522778 - 2522389 - | hypothetical protein TERM 3550 2523326 - 2523281 - H 90 -12.2 -3.492 | opp_overlap 2523292, overlap 2523289 2523292 AAATTAAGCCAAATA GAAAGAAATAATGCACCTTT CATAAT AAAGGTGCATTTTTTATTTC GAGCGAATGGATTTT TERM 3551 2523318 - 2523289 - H 84 -8 -4.73432 | opp_overlap 2523292, overlap 2523281 2523292 CCAAATAGAAAGAAA TAATGCACCTTT CATAAT AAAGGTGCATTT TTTATTTCGAGCGAA TERM 3552 2523315 - 2523292 - H 89 -9.7 -4.42514 | opp_overlap 2523292, overlap 2523289 2523281 AATAGAAAGAAATAA TGCACCTTT CATAAT AAAGGTGCA TTTTTTATTTCGAGC TERM 3553 2523292 - 2523315 + H 100 -9.7 -5.63517 | opp_overlap 2523292 2523289 2523281 AATAGAAAGAAATAA TGCACCTTT CATAAT AAAGGTGCA TTTTTTATTTCGAGC Ctha_2112 2523381 - 2524190 + | protein of unknown function DUF164 TERM 3554 2524333 - 2524322 - T 74 -5.8 -4.57341 | opp_overlap 2524322, overlap 2524309 AAGTTCGGGCAAAAA GGCT GAAG AGCC TTTTTGACAGAAAGT TERM 3555 2524322 - 2524333 + T 74 -5.8 -4.56775 | opp_overlap 2524322 2524309 AAGTTCGGGCAAAAA GGCT GAAG AGCC TTTTTGACAGAAAGT Ctha_2113 2525409 - 2524636 - | ABC transporter-related protein TERM 3556 2525210 - 2525222 + g 72 -4.9 -4.59109 | opp_overlap 2525202, overlap 2525202 2525199 GAAGTAACATCGACA TTATC GAT GATAA TTTTTCCAGCGTCTC Ctha_2114 2527825 - 2525507 - | WD-40 repeat protein TERM 3557 2526825 - 2526798 - G 72 -5 -4.55697 | overlap 2526799 ATTTCCAGAAATAAA TTTTCTATCAAC TCCG ATTGATAGAAAT CCGCGTCAAAAGCCA Ctha_2115 2529321 - 2527909 - | Radical SAM domain protein TERM 3558 2528091 - 2528107 + g 77 -3.7 -5.15969 | opp_overlap 2528093, overlap 2528093 AGTAACTTTGGATAA AATTCCT AAC AGGAATA TTTTTTGGCTTGCAC TERM 3559 2528105 - 2528093 - G 75 -6.3 -4.386 | opp_overlap 2528091 2528093 TAACTTTGGATAAAA TTCCT AAC AGGAA TATTTTTTGGCTTGC TERM 3560 2528093 - 2528105 + g 72 -6.3 -4.20888 | opp_overlap 2528093, overlap 2528091 TAACTTTGGATAAAA TTCCT AAC AGGAA TATTTTTTGGCTTGC Ctha_2116 2530299 - 2529424 - | inner-membrane translocator TERM 3561 2531741 - 2531756 + G 72 -4.7 -4.64861 | AAGCATCGACGTTAA GCGTA AAAGGC TACGC TTTCTTTTCGGAGCG TERM 3562 2532228 - 2532194 - g 76 -2.1 -5.4505 | opp_overlap 2532168 2532195 2532196 2532198, overlap 2532195 2532196 TGGTTGAAGAAAAAA GCTATGATGATGCCG TTACG CCGCATCGTCATAAT TTGCTCCCAGCCATA Ctha_2117 2530957 - 2532990 + | TonB-dependent receptor Ctha_2118 2533017 - 2534132 + | hypothetical protein TERM 3563 2534182 - 2534134 - f 72 -7.1 -3.97088 | gap 1, opp_overlap 2534147, overlap 2534147 2534149 TTTTAGAAGATTAAA TTTTAGTAAAGTAGAGATGGCT GTTGCT AGCCATCTCTTTTTTA-TAAAA CGCAAAATAGCTGTA TERM 3564 2534147 - 2534170 + F 100 -11.8 -5.24129 | opp_overlap 2534134 2534147 2534149 AATTTTAGTAAAGTA GAGATGGCTG TTGC TAGCCATCTC TTTTTTATAAAACGC TERM 3565 2534170 - 2534147 - f 79 -11.1 -2.97439 | opp_overlap 2534147, overlap 2534134 2534149 AATTTTAGTAAAGTA GAGATGGCT GTTGCT AGCCATCTC TTTTTTATAAAACGC TERM 3566 2534251 - 2534240 - g 73 -2.2 -5.10154 | ATGGAAAAGGAAAAA CCAC AGCC GTGA TTGGGTTGGCCATTA Ctha_2119 2534197 - 2534757 + | ATP:corrinoid adenosyltransferase BtuR/CobO/CobP TERM 3567 2534740 - 2534751 + T 70 -5.8 -4.21275 | GGTGTTCCGGCCAGG CTCG GCAT CGAG TTTTAAATGGCTTAC Ctha_2120 2535926 - 2534766 - | Outer membrane protein/protective antigen OMA87-like protein TERM 3568 2535053 - 2535037 - G 72 -2.9 -5.01732 | overlap 2535039 2535050 AATCTTCCCAAAAAA TAGCCTC TCA GAAGCTG GTCGCCCCCGAGCAG Ctha_2121 2536000 - 2536485 + | CMP/dCMP deaminase zinc-binding Ctha_2122 2537374 - 2536487 - | protein of unknown function DUF955 Ctha_2123 2537747 - 2537358 - | hypothetical protein Ctha_2124 2538424 - 2537750 - | RNA polymerase, sigma-24 subunit, ECF subfamily Ctha_2125 2539695 - 2538631 - | hypothetical protein TERM 3569 2539052 - 2539032 - G 70 -9.1 -3.46509 | opp_overlap 2539029 TCGCAACAATATTAA TTCCAGGAA TTG TTCCTGAAA TGCCACTCGCAAACA Ctha_2126 2540086 - 2539880 - | hypothetical protein Ctha_2127 2540345 - 2540181 - | hypothetical protein TERM 3570 2540309 - 2540299 - G 73 -4 -4.82901 | TCTTTTTCATAAAAA GAAA CCA TTTC TTGCGCTTCAATATC Ctha_2128 2541180 - 2540440 - | metallophosphoesterase Ctha_2129 2541339 - 2542079 + | sugar transferase TERM 3571 2543203 - 2543193 - g 86 -4 -5.55698 | overlap 2543183 CAGAATTGAAAAAAA TTCA AGA TGAA ATTAGCGTTTTAAGA TERM 3572 2543251 - 2543235 - g 74 -8.1 -3.88331 | opp_overlap 2543238, overlap 2543238 GTGAAATAAAAGTAA TAACATC AAA GATGTTA AGTGATGATCAGGAT TERM 3573 2543620 - 2543609 - g 95 -3 -5.81622 | opp_overlap 2543601, overlap 2543601 2543600 ATAAAACCAAAAAAA CAAA TTTT TTTG TTAGTTGGGTTTTTG TERM 3574 2543819 - 2543831 + G 76 -4.1 -5.0666 | opp_overlap 2543820, overlap 2543820 AAAGGGAGCAAAATA TCAAC CAG GTTGG TTTCTTTTTTAGATG Ctha_2130 2542142 - 2544532 + | capsular exopolysaccharide family Ctha_2131 2544537 - 2545106 + | hypothetical protein TERM 3575 2545985 - 2545995 + G 73 -4 -4.77698 | TGATTCGAAGTATTA TGTT TTT AACA TTTGTTTTAATGTTG Ctha_2132 2545111 - 2546559 + | polysaccharide biosynthesis protein TERM 3576 2546875 - 2546885 + G 79 -4 -5.21709 | CTGTATTTGTTGATA TTGA ACC TCAA TTTTTTAATATCGAC TERM 3577 2547262 - 2547250 - g 76 -4.9 -4.7629 | GCATCAATGCAAAAA TGAAT GAA ATTCA GGCAGCTTTTGGAAT TERM 3578 2547643 - 2547667 + G 89 -8.8 -4.72846 | opp_overlap 2547640 2547643 TAGAATATGATACCA TGAAAAAGAT ATGTC ATCTTTTTCA TTTTTAACTGTATCC Ctha_2133 2546556 - 2547674 + | DegT/DnrJ/EryC1/StrS aminotransferase TERM 3579 2547831 - 2547805 - g 70 -2.2 -5.07486 | opp_overlap 2547810 2547820, overlap 2547810 2547825 GATTGCCAATAAAAA CAATAGGTTTTG GTA CAAATCCATTTG CTTATGGTGCGTATG TERM 3580 2548162 - 2548201 + G 74 -10.2 -3.12749 | gap 1, opp_overlap 2548176, overlap 2548176 GATTGGTTCAATTTC CCTTTATA-GCAAAACCAC GAG GCGGTTTTGCATCTAAAGG TATTGAAATTATTAA Ctha_2134 2547702 - 2549735 + | NAD-dependent epimerase/dehydratase TERM 3581 2550380 - 2550393 + G 72 -5.3 -4.63218 | TTAAACTTGATATGG TCTTC AGTT GAAGA TTTTGTTAAAACGAA TERM 3582 2550586 - 2550596 + G 74 -5.4 -4.57569 | TGATTTCCGATTGAT TGCT CAT AGCA TTTTTCCGCCGATGC Ctha_2135 2549804 - 2550853 + | Methyltransferase type 12 Ctha_2136 2550935 - 2551306 + | hypothetical protein TERM 3583 2551779 - 2551734 - g 76 -8.7 -4.1721 | gap 1, opp_overlap 2551741 2551742 2551750, overlap 2551742 ATGTATATGTCAAAA TATGCAAATGATGAAAGTTTTC TTG GAAAACTTTCATCACTTA-ATG GGCTTGCAAGTTATG TERM 3584 2551741 - 2551773 + G 86 -13.7 -3.18681 | opp_overlap 2551734 2551742, overlap 2551742 2551750 TGTCAAAATATGCAA ATGATGAAAGTTTTC TTG GAAAACTTTCATCAC TTAATGGGCTTGCAA TERM 3585 2551772 - 2551742 - g 100 -17.2 -3.85184 | opp_overlap 2551742 2551741 2551750, overlap 2551734 GTCAAAATATGCAAA TGATGAAAGTTTTC TTG GAAAACTTTCATCA CTTAATGGGCTTGCA TERM 3586 2551742 - 2551772 + G 100 -17.2 -2.50994 | opp_overlap 2551734 2551742, overlap 2551741 2551750 GTCAAAATATGCAAA TGATGAAAGTTTTC TTG GAAAACTTTCATCA CTTAATGGGCTTGCA TERM 3587 2552756 - 2552788 + G 74 -8.7 -3.89302 | opp_overlap 2552754 2552750 2552756 AAATGAAAACGAATA TTTATTTTCATCTTT TCA AAAGACGAAAATAGA TTTAGTATCCTTGCT Ctha_2137 2551320 - 2552852 + | pyruvate carboxyltransferase Ctha_2138 2552891 - 2553619 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 3588 2553782 - 2553769 - g 85 -6.7 -5.18726 | TTTTCATAAGAAAAA TGGAG GTCT CTCCA GATACGTAAAGTTTA Ctha_2139 2553623 - 2554240 + | HAD-superfamily hydrolase, subfamily IA, variant 1 Ctha_2140 2554244 - 2555182 + | hypothetical protein TERM 3589 2555188 - 2555176 - f 80 -6.3 -5.16841 | TTACAGCAATAAAAA GCAAT AGA ATTGC ATAAAGATTTAAACA TERM 3590 2555893 - 2555875 - g 73 -7.6 -4.09511 | AATATTTCTTCAAAA TCAAAAAT TGG ATTTTTGA AAGATGTAACATCTA Ctha_2141 2555203 - 2556114 + | glycosyl transferase family 2 Ctha_2142 2556156 - 2556323 + | hypothetical protein Ctha_2143 2556320 - 2557342 + | hypothetical protein Ctha_2144 2557740 - 2557904 + | hypothetical protein Ctha_2145 2557901 - 2558923 + | glycosyl transferase group 1 TERM 3591 2560162 - 2560152 - g 74 -5.4 -4.66163 | opp_overlap 2560152 ACCTGCATTCAAAAA TTGC TCT GCAA ATCTTTCTCACATTG Ctha_2146 2558923 - 2561043 + | Alcohol dehydrogenase zinc-binding domain protein TERM 3592 2561998 - 2562011 + G 72 -3.1 -4.91511 | GCATTGAGCGCCAAG CCTTT TTCC GAAGG TTTTTATCATAAAGT TERM 3593 2562078 - 2562108 + G 87 -6.9 -5.17507 | gap 1, opp_overlap 2562078 2562079, overlap 2562079 TGAGTATTCCGGAAA TGCGCCG-AATTTG GGTT CAAATGACGGCGCG TTTTTATTAAATTTT TERM 3594 2562079 - 2562107 + G 72 -8.2 -3.68064 | gap 1, opp_overlap 2562078 2562079, overlap 2562078 GAGTATTCCGGAAAT GCGCCG-AATTTG GGTT CAAATGACGGCGC GTTTTTATTAAATTT Ctha_2147 2561068 - 2562954 + | Heparinase II/III family protein TERM 3595 2563343 - 2563360 + G 72 -4.9 -4.62069 | overlap 2563333 ATATTTTGTCCTTTT TAAAAGG AAAG CCTTTTG TTTTTGAGATAAGAG Ctha_2148 2562958 - 2564193 + | glycosyl transferase group 1 TERM 3596 2564547 - 2564565 + G 75 -11 -3.05384 | overlap 2564549 AGGTGATATGTCTAT CGTCGGAC CTC GTCCGATG TTGCCTCAGCAAGAA TERM 3597 2564549 - 2564563 + G 70 -10 -3.08679 | overlap 2564547 GTGATATGTCTATCG TCGGAC CTC GTCCGA TGTTGCCTCAGCAAG TERM 3598 2564707 - 2564717 + G 73 -4 -4.89966 | GATGCATATTATGTA GATA ACT TATC TTTGTTTTTGGATAT Ctha_2149 2564212 - 2564745 + | sugar transferase Ctha_2150 2564818 - 2565810 + | formyl transferase domain protein Ctha_2151 2565818 - 2566483 + | LmbE family protein Ctha_2153 2566736 - 2567359 + | transferase hexapeptide repeat containing protein Ctha_2154 2567373 - 2568500 + | DegT/DnrJ/EryC1/StrS aminotransferase Ctha_2155 2568536 - 2570410 + | polysaccharide biosynthesis protein CapD TERM 3599 2570620 - 2570609 - g 74 -5.8 -4.69656 | opp_overlap 2570609 AATGATGCAACAAAA CCGT ATGA ACGG TTTGCTATTGCTAAG TERM 3600 2570927 - 2570905 - g 86 -4.8 -5.60864 | overlap 2570907 TATACAGGAAAAAAA TGCCTATGAC TTT GTCGTAGGAA ATAGAGTTTATGCAT Ctha_2156 2570486 - 2572042 + | hypothetical protein TERM 3601 2573061 - 2573040 - g 72 -5.3 -4.69053 | gap 1 TATTATTTAACAAAA GCT-TTTTAC GAC GTAAAAGAGC GCGATATTTTTTGGA TERM 3602 2573656 - 2573668 + G 71 -3.3 -4.91109 | CTGGTTGTTATACCA GTGGC GAT GTCGC TTTTTATGATGAAGA Ctha_2157 2572173 - 2574062 + | AMP-dependent synthetase and ligase TERM 3603 2574115 - 2574088 - T 100 -12.2 -5.24129 | opp_overlap 2574088 CTCCTGGATAAAAAA GGCAATTATGAA CGAA CTCATAATTGCC TTTTTCAATTTTCCG TERM 3604 2574088 - 2574115 + T 100 -11.5 -4.87318 | opp_overlap 2574088 CTCCTGGATAAAAAA GGCAATTATGA ACGAAC TCATAATTGCC TTTTTCAATTTTCCG Ctha_2158 2575447 - 2574167 - | 2-nitropropane dioxygenase NPD TERM 3605 2574221 - 2574193 - G 79 -10.3 -3.61517 | opp_overlap 2574187 ATGCTTTTCTAATAA CCTCTTGCCCAAT AGG ATTGGGTAAGTGG ATAGAATGATTATCG TERM 3606 2575233 - 2575250 + g 78 -5.5 -4.86731 | GAATCATTGCTGAAC GCGCTAT ACTG ATTGCGC TTTTCTTTAACAAAG TERM 3607 2575410 - 2575433 + g 72 -8.2 -3.65782 | overlap 2575423 ATTGGGACATATTCC TTACCGCCTA ATTT TAGGCGATAA TTGTCTAATTTCATA TERM 3608 2575634 - 2575584 - H 79 -8.6 -4.07568 | opp_overlap 2575571 2575584 2575587, overlap 2575588 2575590 CCTTGCTTTCCAAAA GAAATATTTCATAAATGAATTTCC TGT GCAATTTCATTTATGAAAAACCTC TATTTTTACAAATTT TERM 3609 2575630 - 2575588 - H 83 -8 -4.64861 | opp_overlap 2575587 2575584, overlap 2575584 2575590 GCTTTCCAAAAGAAA TATTTCATAAATGAATTTCC TGT GCAATTTCATTTATGAAAAA CCTCTATTTTTACAA TERM 3610 2575628 - 2575590 - H 85 -10.6 -3.93868 | opp_overlap 2575587 2575584, overlap 2575588 2575584 TTTCCAAAAGAAATA TTTCATAAATGAATTTCC TGT GCAATTTCATTTATGAAA AACCTCTATTTTTAC Ctha_2159 2576037 - 2576786 + | phosphoglycerate mutase 1 family TERM 3611 2576845 - 2576821 - g 74 -5.6 -4.59853 | opp_overlap 2576821 TTAATGCTTGAAAAA CGACTGCGGC GAGAG GTTGCAGTCG TTTTTTTATTTTATA TERM 3612 2576821 - 2576845 + G 100 -10 -6.14618 | opp_overlap 2576821 TTAATGCTTGAAAAA CGACTGCGGC GAGAG GTTGCAGTCG TTTTTTTATTTTATA TERM 3613 2577367 - 2577385 + G 76 -2.4 -5.39681 | overlap 2577368 GGGGTGCTGTCAGTT ATTCTGTT GCT AACAGGAA TTTTTATTTGGTTCT Ctha_2160 2576809 - 2577996 + | extracellular solute-binding protein family 3 Ctha_2161 2579013 - 2578000 - | isocitrate dehydrogenase, NAD-dependent TERM 3614 2578492 - 2578506 + g 76 -4.2 -5.08824 | opp_overlap 2578499 CATGATGTTGGCTTT GTGAAC AGC GGTCAC TTTTTTGCGTCCGCG TERM 3615 2579535 - 2579524 - g 73 -4.4 -4.85267 | overlap 2579525 2579526 AGAAACCATGAAAAA GCTT GCCG AAGC TTGGGCAAAGGAATA Ctha_2162 2579372 - 2580289 + | phosphate binding protein TERM 3616 2580318 - 2580336 + G 93 -7.3 -5.63517 | opp_overlap 2580316, overlap 2580319 TGTTTTGACATGATG AGGGGCG TTTTT CGCCCCC TTTTTTATTTCGAGC TERM 3617 2580319 - 2580335 + G 84 -10.8 -3.97026 | opp_overlap 2580316, overlap 2580318 GTTTTGACATGATGA GGGGCG TTTTT CGCCCC CTTTTTTATTTCGAG TERM 3618 2581318 - 2581302 - g 72 -3 -5.05782 | overlap 2581303 ATTGACCCCAAAAAA CTGAAG GTTTT CTTCAA CGATGGCGAAGAGCT TERM 3619 2582254 - 2582266 + G 74 -5.5 -4.62069 | CTCCCGATACCTACC GCGAG TTT TTCGC TTTTTCAGATGCCGC Ctha_2163 2580312 - 2584607 + | hypothetical protein TERM 3620 2584638 - 2584610 - T 79 -8.2 -4.18018 | gap 1, opp_overlap 2584609 GGTGGCGAGGTAAAA TTG-GAGCGGGTT TTGC AGCCCGCTCACAA CTCATATTCCAAAGC Ctha_2164 2587770 - 2584684 - | hypothetical protein TERM 3621 2586829 - 2586816 - G 76 -2.3 -5.44119 | overlap 2586817 CCCAGCCTAAAAAAA TGCGT TCCC ACGCG GACGGCTCGGGGGGC TERM 3622 2586904 - 2586893 - G 71 -7.2 -4.13767 | TCGGCCAGGCCAAAA CGGC CAAT GCCG CTGCTGCCGTCTTCT TERM 3623 2587538 - 2587520 - G 78 -5.2 -5.00616 | opp_overlap 2587534, overlap 2587521 TGTTGGGGTAAAAAA TCCAGTCC GTC GAACTGGC CGTTGCCGGTGGTTT TERM 3624 2587817 - 2587855 + r 100 -15.4 -3.83205 | opp_overlap 2587803, overlap 2587808 2587807 AGCCGTCACGCGTCA GCGTGCTTTCGCTCGT ATGGGTG ACGAACGGAAGCACGC TTTCATGTAAAACAT Ctha_2165 2588971 - 2587877 - | hypothetical protein TERM 3625 2589753 - 2589741 - g 83 -6.3 -5.04385 | opp_overlap 2589741 GACATCGTCAAAAAA GGATT GCA AATCC TTGTCCGGCTGAGCC TERM 3626 2591119 - 2591093 - g 72 -5.1 -4.59773 | gap 1, overlap 2591094 2591095 CCCGATGGCCAAAAA CGCCATCGAGCC AATT GGCGCAATGG-G CAATGATACGCCGCT TERM 3627 2591548 - 2591535 - g 74 -3.8 -4.98436 | opp_overlap 2591542 CTAACACCAGAAAAA GCTG CGATTC CAGC AATGCTGGCGGTTTC TERM 3628 2591636 - 2591658 + G 76 -8.4 -4.08767 | TGAATCCGGTGAGCC GCGCGAGGTG CAT CATTTTGCGC TTTTGACCGGCTACG TERM 3629 2591781 - 2591762 - g 74 -10.8 -3.17051 | opp_overlap 2591777, overlap 2591760 2591777 TGTCGATTATGAACA TGCCGTAA AAAA TTACGGCA AAGCCATTGTGAAAG TERM 3630 2592513 - 2592499 - g 72 -5.6 -4.37534 | overlap 2592501 AAATTCAGATTAAAA TGGCGC AGG GCGCAA AGCCCGGCGAAGGCG TERM 3631 2592787 - 2592807 + G 72 -9 -3.55444 | gap 1, overlap 2592785 TCAGCGGCTACGACG GCGGC-ACG GGCG CGTCGCCGC TTTCGAGCATCAAAA Ctha_2166 2589627 - 2594216 + | Glutamate synthase (ferredoxin) TERM 3632 2594228 - 2594261 + F 79 -10.3 -3.26405 | overlap 2594226 2594225 CTAATTGTTTAACTG CGTGTCGGATTTCGT CTCC GCTCAATCCGACACG TGATTTTTACCTGCG TERM 3633 2594840 - 2594829 - g 70 -2.2 -5.00616 | opp_overlap 2594834 CGCGCCGCCAAAAAA TCGC ACGG GCAA AAAAGTGGCCGTTGT TERM 3634 2594928 - 2594950 + G 76 -7.6 -4.34402 | CGTCACCGTCTTTGA GCGTGCCGAT AGA GTCGGCGGGC TTTTGATGTACGGCA TERM 3635 2595361 - 2595329 - g 70 -4.8 -4.4874 | gap 1 GCCAAAAATGCAAAA GCGTGGTTCAGCTTG AAAT CATGCCGAAAC-CGC CGCTCGAACGAGCCA Ctha_2167 2594383 - 2595861 + | glutamate synthase, NADH/NADPH, small subunit TERM 3636 2595889 - 2595908 + F 100 -10.8 -5.63517 | opp_overlap 2595888 2595887 TGGGAAATCAGAATG GGCAAGTT TTCG AACTTGCC TTTTTTGTTTCGAGC TERM 3637 2596092 - 2596065 - g 73 -7.8 -4.1899 | gap 1, opp_overlap 2596070 2596072 GTATTTGATGGAAAA CGACAA-GTTCGC CAA GCGAATATTGTCG GTGATATTGGACACG Ctha_2168 2596012 - 2596926 + | hypothetical protein TERM 3638 2598812 - 2598828 + G 82 -7.9 -4.57341 | TGCCGTATCAGCTCA CGCCGGC GGA GTCGGTG TTTTTAACCAGCATT Ctha_2169 2597065 - 2599056 + | glycosyl transferase family 51 Ctha_2170 2599134 - 2599928 + | protein of unknown function DUF140 TERM 3639 2599988 - 2600005 + F 90 -8.4 -5.00027 | opp_overlap 2599985 2599988 ATCTTACACAACGCA TCCGGC TATCGC GCCGGA TTTTCTATTTTTGAT TERM 3640 2600295 - 2600284 - g 70 -2.2 -4.95484 | GATGACGAAATAAAA CGCA TTCG TGCA AAAATATCCTATCTG Ctha_2171 2600056 - 2600775 + | ABC transporter-related protein Ctha_2172 2600784 - 2601860 + | Mammalian cell entry related domain protein TERM 3641 2602722 - 2602687 - g 72 -4.7 -4.61231 | gap 1, overlap 2602688 TGAGATTTTGAAAAA CGCAGAT-CGTCTTGC GGCTT GCAAGGCGCAGCTGCA AGCATTGCCGGAATA Ctha_2173 2601860 - 2602738 + | hypothetical protein TERM 3642 2602758 - 2602744 - f 100 -7.1 -5.7946 | overlap 2602746 GCCGGAATAAAAAAA CGCAG TTGCC CTGCG CGCAATTGGCAAAAA TERM 3643 2602797 - 2602776 - f 78 -3.1 -5.43866 | CAATTGGCAAAAAAA TTTTGAAAA GCAT TTCCCAAAA AGAGGGCTTTGTTCA Ctha_2174 2602894 - 2604024 + | ABC-type phosphate transport system periplasmic component-like protein TERM 3644 2604088 - 2604110 + F 100 -9.1 -5.4477 | overlap 2604091 GAAAAGTTTTTATAT TCAGGCCGG TTTTT CCGGCCTAA TTTTTTTGAAGATTT TERM 3645 2604091 - 2604107 + F 83 -10.8 -3.49966 | overlap 2604088 AAGTTTTTATATTCA GGCCGG TTTTT CCGGCC TAATTTTTTTGAAGA Ctha_2175 2604145 - 2605104 + | phosphate-binding protein, putative TERM 3646 2605270 - 2605257 - T 79 -2.4 -5.53288 | opp_overlap 2605244 CCGAAGTTAAAAAAA CTTC TATTAT GAAG ATCTGAGAGACGCAA Ctha_2176 2606288 - 2605329 - | aspartate carbamoyltransferase TERM 3647 2606158 - 2606168 + g 82 -5.4 -5.24531 | TGTTCCGATGGCGTT TCCA TAA TGGA TTTTTTGTAGAAGCT TERM 3648 2606368 - 2606329 - R 80 -5.8 -5.10163 | gap 1, opp_overlap 2606332, overlap 2606332 AAGCCGAAAATAAAA GAAGGCCGCT-TGCTTC TCAGTCG GAAGAATAGCGGCCTTT AAAACACAAACGTGC TERM 3649 2606332 - 2606365 + r 71 -8.2 -3.53012 | gap 1, opp_overlap 2606329 2606332 CCGAAAATAAAAGAA GGCCGCT-TGCTTCT CAGTC GGAAGAATAGCGGCC TTTAAAACACAAACG TERM 3650 2606365 - 2606332 - R 83 -7.5 -4.6313 | gap 1, opp_overlap 2606332, overlap 2606329 CCGAAAATAAAAGAA GGCCGCT-TGCTTC TCAGTCG GAAGAATAGCGGCC TTTAAAACACAAACG Ctha_2177 2606865 - 2606407 - | hypothetical protein Ctha_2178 2608288 - 2607020 - | hypothetical protein Ctha_2179 2608978 - 2608316 - | hypothetical protein TERM 3651 2610631 - 2610618 - g 74 -8.1 -3.9243 | overlap 2610615 GAAGCGGTTAAAGAA GCTGC CGCT GCAGC TGATGGCGAGGCGAT Ctha_2180 2609223 - 2610656 + | dihydrolipoamide dehydrogenase TERM 3652 2610687 - 2610717 + T 74 -9.8 -2.64155 | opp_overlap 2610701, overlap 2610684 CTAAGTTCTAATCGT GTAGAGGCGATC AAGCACA GGTTGCCTCTAC TGCGTTTCCAGCCGC TERM 3653 2610728 - 2610741 + T 73 -3.7 -5.15634 | TCTACTGCGTTTCCA GCCGC TTAA GGGGC TTTTTTCATCCAATC Ctha_2181 2611611 - 2610733 - | beta-lactamase domain protein TERM 3654 2611370 - 2611386 + g 72 -3 -5.00895 | AAGCTTGCGAGCACA TCTGTT ACGGG AGCAGA TTTTTGTGTGGTGCC TERM 3655 2611440 - 2611428 - G 77 -3.3 -5.14563 | opp_overlap 2611428 TTGGGCAGGAAAAAA GGGCT TGG AGCGC ATGTGTTTCTTCGAT Ctha_2182 2611761 - 2612222 + | response regulator receiver protein TERM 3656 2612869 - 2612880 + GF 80 -7.2 -4.57837 | opp_overlap 2612869 GGACGACGAGAAGCA GCGG GTAA CCGC TTTTTACGGCGCTGT TERM 3657 2612934 - 2612918 - gf 72 -5.1 -4.6951 | opp_overlap 2612921, overlap 2612921 ATCACGGAAAAGAAA CAAGCAG AGT CTGCTTT TCGTGAGGCCACATT TERM 3658 2612931 - 2612921 - gf 77 -6.8 -4.44301 | opp_overlap 2612921, overlap 2612918 ACGGAAAAGAAACAA GCAG AGT CTGC TTTTCGTGAGGCCAC TERM 3659 2612921 - 2612931 + GF 74 -6.8 -4.25104 | opp_overlap 2612921 2612918 ACGGAAAAGAAACAA GCAG AGT CTGC TTTTCGTGAGGCCAC TERM 3660 2614096 - 2614074 - gf 71 -9.3 -2.55015 | overlap 2614070 2614079 ATGTCACTGAACTGA TTCAAGCAA GGCAA TTGCTTGAA GCTGAGAGCTCGTTC TERM 3661 2614407 - 2614434 + GF 80 -7 -4.62002 | TAATTTCCATGTCGC TGTTGCATACCA ATGA TGGCAAGCAACA TTTTCTCTCGTTAAT TERM 3662 2615735 - 2615749 + GF 77 -9.2 -3.39142 | TTTACCTACATCAGT CCGGCG GTT CGTCGG TTGCTTGGATATGAG TERM 3663 2617263 - 2617251 - gf 78 -6.3 -4.64763 | overlap 2617260 GCATCGAAAAAATAA GCAAA ACA TTTGC AGAGCAACATCAGCT TERM 3664 2617441 - 2617451 + GF 74 -6.8 -4.2558 | opp_overlap 2617437 2617441 TGCGGTGAAAAGCCA TCGC GGC GCGA TTTTGCTGGAAAGTG Ctha_2183 2612144 - 2617519 + | PAS/PAC sensor signal transduction histidine kinase Ctha_2184 2617589 - 2618374 + | hypothetical protein TERM 3665 2618486 - 2618475 - f 100 -5.8 -5.86609 | TCAAAAAAACAAAAA CCGT GAGA ACGG GCTAAGCAAAAGCTG Ctha_2185 2618542 - 2619099 + | hypothetical protein Ctha_2186 2620719 - 2619127 - | choline/carnitine/betaine transporter TERM 3666 2619373 - 2619363 - G 85 -6.8 -5.00616 | TGGTTGCCCAAAAAA TCCG CTG CGGA ATGGGCGGATCGGGA TERM 3667 2620913 - 2620892 - R 100 -9.4 -5.61881 | opp_overlap 2620892 2620891 CGCCAAAAATAAAAA GGCAGACC TCTTCC GGCCTGCC CTTTAACGAATATGC Ctha_2187 2621773 - 2620934 - | Methyltransferase type 11 Ctha_2188 2622591 - 2621770 - | Methyltransferase type 12 TERM 3668 2623024 - 2623004 - H 73 -2.6 -5.33985 | TCGAAAAAAAACAAA TTGCTG AATTTTAGG CAGCAA GCCATACTAAACTTT Ctha_2189 2623292 - 2624614 + | diguanylate cyclase TERM 3669 2625289 - 2625267 - g 79 -2.7 -5.40474 | overlap 2625268 ATTTTGGGAAAAAAA CTTGCGC AACGGATAG GCGCAAA AGTCGGTAGCTCTGT Ctha_2190 2624775 - 2626064 + | protein of unknown function DUF214 Ctha_2191 2626069 - 2627325 + | protein of unknown function DUF214 TERM 3670 2627486 - 2627476 - g 74 -6.8 -4.26305 | AAAACTCAAGAGAAA TCGC AAG GCGA GAAAAGGCTTAGGAT Ctha_2192 2627432 - 2628379 + | cation diffusion facilitator family transporter TERM 3671 2628435 - 2628445 + F 75 -2.4 -5.47159 | opp_overlap 2628434 2628435 AGCTATATTACTAAG CGGC AAC GCCC TTTTTGTTTGTTAAA Ctha_2193 2628476 - 2629336 + | cyclic nucleotide-binding protein Ctha_2194 2629401 - 2629760 + | ferredoxin Ctha_2195 2629909 - 2630916 + | phosphate acetyltransferase Ctha_2196 2631884 - 2630913 - | 8-oxoguanine DNA glycosylase domain protein TERM 3672 2631440 - 2631473 + g 85 -12.6 -3.38112 | gap 1, overlap 2631438 AATCATTAATTTTCT CGCCAAATTG-GCGG GCGAG CTGCTCAATTTGGCG TCTTATAATTTGAAT Ctha_2197 2632989 - 2631907 - | A/G-specific adenine glycosylase TERM 3673 2632503 - 2632514 + g 72 -3 -4.94168 | overlap 2632495 GCAGCTCTTGTGCTA CAAT TCTA ATTG TTTGTTTTGTTGTAT TERM 3674 2633076 - 2633110 + r 71 -3.8 -4.85599 | ATAGACTTTTAAGTT TTTTAAATCAAATAGT TAA GTTTTTTGGTTTAAAA TTTTTCTAAAATGGA Ctha_2198 2633807 - 2633133 - | HAD-superfamily hydrolase, subfamily IA, variant 1 TERM 3675 2633313 - 2633323 + g 95 -2.6 -5.83226 | overlap 2633317 2633318 TAGTTGATTTAGCGC TATT TCG AATA TTTTTTTATTCGGTT Ctha_2199 2634529 - 2633804 - | NAD-dependent epimerase/dehydratase Ctha_2200 2635305 - 2634700 - | hypothetical protein TERM 3676 2635001 - 2634974 - G 95 -2.7 -5.90231 | ATAAACATAAAAAAA CCAGCAAGG AAAAGCATGA CCTTGTTGG TTGAGATTTTTCCGG TERM 3677 2635429 - 2635398 - R 70 -8.1 -3.35526 | gap 1, opp_overlap 2635405, overlap 2635404 2635405 CAATTAGAAATCCAA CCAAA-ATGGGCTC AAATA GAGCCCTTATTTGG CGATTTGCAGTTCAG TERM 3678 2635422 - 2635404 - R 72 -5.9 -4.47271 | opp_overlap 2635405, overlap 2635398 2635405 GAAATCCAACCAAAA TGGGCTC AAATA GAGCCCT TATTTGGCGATTTGC TERM 3679 2635405 - 2635421 + r 81 -9.4 -3.95071 | opp_overlap 2635404 2635398 2635405 AAATCCAACCAAAAT GGGCTC AAATA GAGCCC TTATTTGGCGATTTG TERM 3680 2635421 - 2635405 - R 75 -9.4 -3.27278 | opp_overlap 2635405, overlap 2635404 2635398 AAATCCAACCAAAAT GGGCTC AAATA GAGCCC TTATTTGGCGATTTG Ctha_2201 2636297 - 2635422 - | lipoic acid synthetase TERM 3681 2636121 - 2636159 + g 75 -9.7 -3.65224 | CATAATTGTTCCAGT GCCTGCTGCCC-AACACTC TGA GA-TGTTTGGGCAGCGAGC TTCTTCGCATACGGT Ctha_2202 2637696 - 2636353 - | catalytic domain of components of various dehydrogenase complexes TERM 3682 2637072 - 2637112 + g 73 -10.6 -2.96274 | gap 1, overlap 2637069 2637106 GTATAATCTCCGTTC G-CTCTGAAGCATGATGCG AAAT TGTAGCATGCTTCAGAGAC TCTGCTTGTGGAGCA TERM 3683 2637115 - 2637127 + g 83 -4.1 -5.28831 | overlap 2637106 ATGCTTCAGAGACTC TGCTT GTG GAGCA TTTTCTTTTATTGGT TERM 3684 2637158 - 2637177 + g 79 -2.9 -5.4505 | gap 1 CGCTTTTCTGTGGAA GCAT-AGC TCTGT GCTGATGC TTTTTTGTTAGCCAG Ctha_2203 2638245 - 2637859 - | hypothetical protein TERM 3685 2637884 - 2637895 + g 70 -2.2 -5.05577 | overlap 2637866 TGCCCATGATATTTA TGGG GTAA TCCA TTTTTAGTTTCGTTT TERM 3686 2637984 - 2637998 + g 82 -2.8 -5.58179 | overlap 2637985 TTAATATTTTTTCTA ACTCTT GAT AAGAGA TTTTTTGTTCTGATA Ctha_2204 2638760 - 2638407 - | protein of unknown function DUF419 TERM 3687 2638638 - 2638659 + g 73 -9.5 -3.39352 | opp_overlap 2638633 TGACTCAAATCGATC GATGTTCGT TAAG GCGAACATC TTCCCTTTTACCTTG Ctha_2205 2639062 - 2638778 - | hypothetical protein Ctha_2206 2639402 - 2640016 + | Methyltransferase type 11 TERM 3688 2640073 - 2640042 - T 100 -16.8 -5.72622 | gap 1, opp_overlap 2640047 CTTATAAATAAAAAA GCAAACCG-GAGTTC TCA GAACTCTCGGTTTGC ACATATATTGAATAC TERM 3689 2640047 - 2640068 + T 78 -9.5 -3.60948 | gap 1, opp_overlap 2640042 AAATAAAAAAGCAAA CCG-GAGTTC TCA GAACTCTCGG TTTGCACATATATTG Ctha_2207 2640263 - 2640105 - | hypothetical protein Ctha_2208 2640785 - 2640399 - | Thioredoxin domain TERM 3690 2640682 - 2640695 + g 70 -2.4 -5.03715 | opp_overlap 2640682 TTCGATGGCAATTCA GGAA CAGGCT TTCC TTTTTTGAAGCTCGT Ctha_2209 2641980 - 2640946 - | integrase family protein TERM 3691 2642132 - 2642122 - H 79 -4 -5.43866 | opp_overlap 2642122 2642119 TAATCGTTAAAAAAA TTGA AAA TCAA TTCTTTTTTAGAAAA TERM 3692 2642445 - 2642456 + H 71 -4.4 -4.77036 | opp_overlap 2642445 TTTTTGAGTGAAAAT TGCT GCTA AGCA TTTTTCCTCATCAAC TERM 3693 2644406 - 2644419 + G 88 -3.8 -5.64873 | ATCCCAGCATTTCAA CGGA GCTGTG TCCG TTTTTTATTCTTGGG Ctha_2210 2642802 - 2644940 + | TonB-dependent receptor plug TERM 3694 2644955 - 2644979 + T 84 -10.8 -3.71645 | gap 1 ATCAATGCGATGTAG GGGCAGACGAC CTAA GT-GTCTGCCC TTTGCATCTAAGCTT Ctha_2211 2645562 - 2644987 - | ATP/cobalamin adenosyltransferase Ctha_2212 2647106 - 2645811 - | cobalamin biosynthesis protein CbiD TERM 3695 2645957 - 2645937 - G 70 -5.3 -4.41206 | overlap 2645939 AAGCACCTGATAAAA CGGTTCGTC TTT GCCGAACGG AATTAGCTCCGTGAT TERM 3696 2647484 - 2647452 - g 77 -6.9 -4.41353 | CCACAGACAGCAAAA CTCACCGCTTCCGAC GCC GTCAGTGGCGATAAG GACGGCGACAATCCG Ctha_2213 2647212 - 2647676 + | hypothetical protein TERM 3697 2647703 - 2647725 + T 100 -15.6 -4.55295 | AAATTTCATCGTGAA GGGCGAGCAC CCG GTGTTCGCCC TTTCTTTCTCGAACA TERM 3698 2647860 - 2647870 + T 71 -4 -4.96435 | GGCTCAGAAGCCTCA GAAT GAC ATTC TTCTTTTTTTGTTAC Ctha_2214 2648730 - 2647951 - | precorrin-6x reductase TERM 3699 2648066 - 2648081 + g 72 -2.6 -5.00616 | gap 1, overlap 2648067 ATCGGAATTTCGGCC T-GAAGC GCG GCTTCTA TTTTTTCCGGCAAAA TERM 3700 2648067 - 2648079 + g 73 -7.7 -4.13561 | overlap 2648066 TCGGAATTTCGGCCT GAAGC GCG GCTTC TATTTTTTCCGGCAA Ctha_2215 2650616 - 2648727 - | precorrin-4 C11-methyltransferase TERM 3701 2649805 - 2649768 - G 74 -5.5 -4.62471 | gap 1, overlap 2649772 2649803 GGCAAGCTTCAAAAA CG-CAGGCTCGGCGGATT TCA AACTCGCCGAACCGATCG AATGAATCGAAGCGG TERM 3702 2649800 - 2649772 - G 77 -11.7 -2.84171 | overlap 2649768 AGCTTCAAAAACGCA GGCTCGGCGGATT TCA AACTCGCCGAACC GATCGAATGAATCGA TERM 3703 2650118 - 2650135 + g 84 -8.5 -4.58663 | GCTCGATAAAACGCG CGATGAA GTTG TTCATCG TTTTTAACGCCTCAT TERM 3704 2651108 - 2651118 + G 71 -6.8 -4.06384 | CAATATTGGGAATGC GCTG CAA CAGC TTTCTGATATTGCAG Ctha_2216 2650731 - 2652899 + | WD-40 repeat protein Ctha_2217 2654108 - 2652909 - | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit TERM 3705 2653470 - 2653483 + g 76 -4.5 -5.02074 | gap 1, overlap 2653471 2653479 2653480 AATGCCGAAATAGCT CGG-CG CGT CGTCCG TTTTTTGCAGAATAA Ctha_2218 2654950 - 2654105 - | hypothetical protein TERM 3706 2654878 - 2654894 + g 78 -6.6 -4.56597 | opp_overlap 2654891 GCAAATCTTTGTTCG GCTCTT CTCCA AAGAGC TTTTTAAACCCGAAG Ctha_2219 2655270 - 2655052 - | prevent-host-death family protein TERM 3707 2655403 - 2655417 + r 70 -7.2 -3.8046 | CAGCATGACAACCGT TTTGTG ATT CACAAA TTTGCGATTTTTCCA Ctha_2220 2656899 - 2655487 - | precorrin-3B C17-methyltransferase Ctha_2221 2657649 - 2656906 - | precorrin-2 C20-methyltransferase Ctha_2222 2657791 - 2657663 - | hypothetical protein Ctha_2223 2658671 - 2657775 - | cobalamin (vitamin B12) biosynthesis CbiX protein Ctha_2224 2659443 - 2658661 - | uroporphyrin-III C-methyltransferase TERM 3708 2658864 - 2658829 - G 71 -9.7 -3.21276 | gap 1, overlap 2658827 2658831 2658849 TTGGTCGGGATAAGA CACGCGCGAGACGGCA CAAAC CGGCGTCTCGCACG-G AACACCGACGGAGAT TERM 3709 2658863 - 2658831 - G 83 -13.4 -3.17146 | overlap 2658829 2658827 2658849 GGTCGGGATAAGACA CGCGCGAGACGGCA CAAAC CGGCGTCTCGCACG GAACACCGACGGAGA TERM 3710 2659169 - 2659159 - G 72 -8.2 -3.80855 | opp_overlap 2659158 2659159, overlap 2659156 GCGCCCAAAAATGAA CGGG TCG CCCG ATTTAAGCCGCACGC Ctha_2225 2660130 - 2659462 - | cob(II)yrinic acid a,c-diamide reductase TERM 3711 2659996 - 2659984 - G 77 -9.1 -3.87869 | opp_overlap 2659986 CCAAGGCTGCATAAA GCCGA CGC TCGGC GCGTTGTGCGCGGCA Ctha_2226 2661026 - 2660139 - | NAD-dependent epimerase/dehydratase TERM 3712 2660254 - 2660281 + g 79 -10.6 -3.6003 | gap 1, opp_overlap 2660246, overlap 2660278 GACGATATGAGCTTG CGGCTGCTCACGA TTT TCGGGA-CAGCCG TTTCGCGCTCGTTTG TERM 3713 2660330 - 2660302 - G 76 -8.1 -4.07568 | opp_overlap 2660314, overlap 2660311 CGCTCGTTTGGAAAA TCTGGAAAATCCG GTT CGGGCTTGCCAGA AAGCCGGAACGCCTT TERM 3714 2661089 - 2661068 - R 81 -11.6 -2.71059 | opp_overlap 2661067 2661081, overlap 2661064 2661065 TCAATACCAAATCGA GGGCAGAC GCGCAG GTCTGCCC CTACATTGCCATTTT Ctha_2227 2662097 - 2661237 - | cobalt ABC transporter, ATPase subunit TERM 3715 2661369 - 2661395 + g 74 -8.6 -3.85817 | opp_overlap 2661374, overlap 2661371 2661374 GCCGATTCGGGTTAA GCGAAGCTGTGC GCC GCGCAGCATCTC TTTATCGGCGAACAT TERM 3716 2661371 - 2661393 + g 75 -9.8 -3.51934 | opp_overlap 2661374, overlap 2661369 2661374 CGATTCGGGTTAAGC GAAGCTGTGC GCC GCGCAGCATC TCTTTATCGGCGAAC TERM 3717 2661641 - 2661651 + g 76 -2.4 -5.40072 | CCAGCACGCCCGCTA TCGC CAC GCGC TTTTTTTGCCCGAAG TERM 3718 2661699 - 2661709 + g 73 -2.4 -5.1101 | overlap 2661697 TTTGTCCTTGAGCGG CGCG ACA CCCG TTTTTTCCATGATGC TERM 3719 2661913 - 2661923 + g 79 -8.2 -4.20354 | TTGCGCAAAATTTGC CCCG ATA CGGG TTTTAAAATTCCGTT Ctha_2228 2662888 - 2662097 - | cobalt ABC transporter, inner membrane subunit CbiQ Ctha_2229 2663313 - 2663002 - | Cobalt transport protein CbiN Ctha_2230 2664056 - 2663310 - | cobalamin biosynthesis protein CbiM TERM 3720 2663651 - 2663640 - G 71 -7.2 -4.18762 | opp_overlap 2663628 2663642, overlap 2663628 AACCGCCATCGAAAA GGCG TTTG CGCC AAGCGTTGTCAGGCC TERM 3721 2663743 - 2663717 - G 71 -7.2 -4.10657 | overlap 2663741 CGATACTGCCCAAAA TGCTCATCACGC TCG GCCCGAAGAGCA TCGCCCCCAGCCCGA Ctha_2231 2665168 - 2664146 - | Xylose isomerase domain protein TIM barrel TERM 3722 2664281 - 2664271 - G 82 -6.8 -4.83759 | AAGCAAATTCAAAAA CGAC ATG GTCG GGAGAAATCAGCTCG TERM 3723 2664359 - 2664327 - G 73 -7.7 -4.07568 | GCGGCGTCTTCAAAA GCGTTGTGTTGGTCA ATT TGACGAACATGACGC GCGGCAATGGAGAGC TERM 3724 2664525 - 2664548 + g 70 -2.5 -5.06414 | gap 2, overlap 2664527 AAATACTCGATGCCT TC--TCGCTCG GTTC CGAGCGATTGA TTTTTGTTGAGCAAA TERM 3725 2664527 - 2664544 + g 87 -11.3 -3.9407 | overlap 2664525 ATACTCGATGCCTTC TCGCTCG GTTC CGAGCGA TTGATTTTTGTTGAG TERM 3726 2664997 - 2664986 - G 71 -3.6 -4.8083 | CAACATGATGAAAAA GCGC AAAT GCAC ACCACCGATCAGTTC Ctha_2232 2666754 - 2665165 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Ctha_2233 2667884 - 2666742 - | protein of unknown function DUF105 TERM 3727 2667469 - 2667482 + g 79 -4.5 -5.24129 | overlap 2667454 CCGTTGGTGACGAGC GGTTC GTAC GAGCC TTTTTTCTCCCAAAC TERM 3728 2667822 - 2667835 + g 84 -5.3 -5.27477 | opp_overlap 2667822 ATATGTTTTTTTAAA TCGTA CGAA TACGA TTTTTTCATTGCGAT Ctha_2234 2669230 - 2667977 - | iron(III) ABC transporter, periplasmic iron-binding protein TERM 3729 2669932 - 2669916 - g 72 -8.7 -3.69455 | opp_overlap 2669916 ACAAAAATTTTGAAA GCTTGCC CCA AGCAAGC AAGCCTTTTTCGGCA TERM 3730 2670634 - 2670648 + G 74 -5.6 -4.61231 | opp_overlap 2670634 GCGATGGAAAAACAA CCGGCG TGG TGCTGG TTTTTCGAGATGTGA TERM 3731 2670723 - 2670707 - g 80 -6.5 -4.81644 | overlap 2670716 CAAAGAAAATGAAAA GCGATTG AAG CAAGCGC AGCGCATCGCGAAAA TERM 3732 2671238 - 2671218 - g 72 -9.1 -3.63922 | overlap 2671216 ATGCTCGGGAAAACA GATGCTGAA ATT TTCAACATC CCTGAAGATGCCGAT TERM 3733 2671345 - 2671360 + G 76 -4 -5.00616 | gap 1, overlap 2671348 CGGTGATTTTTCCTG GTGGCGA AGT TCGC-AC TTTTTTAACGCGCAA TERM 3734 2671858 - 2671846 - g 75 -6.3 -4.44667 | CTGCCGAAGAAGAAA TCAGA GCG TCTGA AGCCAAATATAAATC TERM 3735 2672461 - 2672451 - g 76 -8.2 -4.08767 | overlap 2672452 CTCACGTTCTCAAAA GGCG GTG CGCC GCTTAAAGAGCATGT Ctha_2235 2669724 - 2673371 + | PAS/PAC sensor hybrid histidine kinase TERM 3736 2674069 - 2674082 + G 78 -6.7 -4.56597 | opp_overlap 2674063 ACTACAACACGCTGA CTTGG AGCG CCAAG TTTTTCCACAGCGCC TERM 3737 2675410 - 2675385 - g 71 -9.7 -3.14132 | CTGCTGGTCGATGAA TCGGTCAGCGA AAAA TGGCCGACCGA CTCGCCGAGCATGTA TERM 3738 2675431 - 2675447 + G 82 -7.9 -4.56597 | overlap 2675433 CGAGCATGTACGCCC GCCGCTG CCT CAGCGCC TTTTTGGACGCCACC Ctha_2236 2673711 - 2675639 + | DNA primase TERM 3739 2675847 - 2675826 - f 81 -9.4 -3.97139 | TAAGCCGAACAAGAA GGGCGAAC ACATAA GCTCGCCC CTACAAATCAATCGG TERM 3740 2675872 - 2675900 + F 70 -7.5 -3.5944 | gap 1, overlap 2675876 AATCGGCAACGGATG GTAAGGGCAGAC CTACGT GTCTGCCC-TGC TTTGACAGTATCAAT TERM 3741 2675876 - 2675897 + F 82 -11.6 -2.92171 | overlap 2675872 GGCAACGGATGGTAA GGGCAGAC CTACGT GTCTGCCC TGCTTTGACAGTATC TERM 3742 2676268 - 2676243 - g 83 -2.5 -5.75342 | opp_overlap 2676249 2676250, overlap 2676250 TTCGCTGAAAAAAAA CGTCAAACG GCATGAAA CGCTTGCCG ATATTTTGACGAACT Ctha_2237 2676067 - 2677356 + | Peptidase M23 Ctha_2238 2679482 - 2677578 - | peptidase M61 domain protein Ctha_2239 2680501 - 2679515 - | DNA methylase N-4/N-6 domain protein Ctha_2240 2680986 - 2680573 - | hypothetical protein TERM 3743 2681565 - 2681537 - g 82 -3.1 -5.626 | opp_overlap 2681545, overlap 2681538 TATGCTACAAAAAAA GGTCTTAATCATC GAG GATGATTTTGACA TCGCTAACTTGGTCA Ctha_2241 2681523 - 2682242 + | two component transcriptional regulator, winged helix family TERM 3744 2682286 - 2682272 - f 72 -9.2 -2.80533 | opp_overlap 2682284, overlap 2682271 TGCCAAAATTATAAT GCCAGC GTT GCCGGC GTCTCCCCTTTTCTA TERM 3745 2682688 - 2682673 - g 91 -6.2 -5.52384 | TTTCCATCAAAAAAA TTGAGA CTTT TCTCAA AGGCGATCAGCAATT Ctha_2242 2682333 - 2683835 + | integral membrane sensor signal transduction histidine kinase TERM 3746 2684064 - 2684083 + F 76 -5 -5.14563 | opp_overlap 2684064 GTGCAATTAGATGAA CTCTTGTA TTTC TTCAAGAG TTTTTTGATAAAGAA TERM 3747 2685957 - 2685931 - f 74 -8.8 -3.52849 | opp_overlap 2685931 2685932, overlap 2685929 2685932 CAATTAGATGAAATA CTTTGCGCATAG ACG CTATGCCCAAAA TTATGTTTCAATTCC TERM 3748 2685956 - 2685932 - f 74 -10.1 -2.70986 | opp_overlap 2685932 2685931, overlap 2685931 2685929 AATTAGATGAAATAC TTTGCGCATAG ACG CTATGCCCAAA ATTATGTTTCAATTC TERM 3749 2685932 - 2685956 + F 75 -10.1 -2.911 | opp_overlap 2685931 2685929 2685932, overlap 2685931 AATTAGATGAAATAC TTTGCGCATAG ACG CTATGCCCAAA ATTATGTTTCAATTC TERM 3750 2687081 - 2687071 - f 72 -5.4 -4.5954 | overlap 2687064 CCAGATCAGAGAAAA CGAT TTT ATCG CGGTTTCAATTCCAC TERM 3751 2689039 - 2689049 + F 71 -4 -4.9792 | AGATGAAATATGGCA GAAA AAC TTTC TTTTTGTATGAAATG TERM 3752 2690068 - 2690042 - f 70 -3 -5.17576 | overlap 2690044 CAGCAATTTAAAAAA GGGGAAATAAAA TAG TTTCAATTCCAC ATTGGTGCAATTAGA TERM 3753 2690886 - 2690900 + F 72 -7.2 -3.96624 | GCAATTAGATGCAGT GAATTC AAT GAATTC TTTATCATCAAAATC TERM 3754 2691846 - 2691819 - f 74 -5.6 -4.84274 | gap 2, opp_overlap 2691819 CAATTAGATGAAAAA CCCGGACGCACC AATCAA GGTG-G-CCGGG TTTGGTTTCAATTCC TERM 3755 2694339 - 2694350 + F 79 -2.2 -5.5454 | ACTTATCCACCGTTA CTTC GTTG GGAG TTTTTGTTTGTTTCA TERM 3756 2694877 - 2694889 + F 70 -4.9 -4.57073 | opp_overlap 2694877 AATAGAAAGATATAA GAAAA CCT TTTTC TTTTTGCGAAACCTG TERM 3757 2695567 - 2695580 + G 79 -8.1 -4.36914 | opp_overlap 2695566 CAACCCGCGCAAATT GTGGC ATTT GCCAC TTTTATGGCGGCGGC Ctha_2243 2695008 - 2696573 + | cytochrome c family protein TERM 3758 2697101 - 2697119 + G 78 -5.2 -4.93365 | AGCGCTCATTGCGAT TGTGCACA CGC TGGGCGCA TTTTTGCTTGTCGCC Ctha_2244 2696622 - 2697248 + | cytochrome B561 Ctha_2245 2697282 - 2697797 + | protein of unknown function DUF395 YeeE/YedE Ctha_2246 2697813 - 2698268 + | rhodanese domain protein TERM 3759 2698714 - 2698695 - g 80 -6.4 -4.85782 | overlap 2698697 2698703 TGTTTGAAAAAGAAA CGGCGAAA TTGC TTTCGCGG AAAGGAAAAATGAAG Ctha_2247 2698280 - 2699005 + | Rhodanese domain protein TERM 3760 2699058 - 2699033 - T 80 -6.2 -5.13527 | opp_overlap 2699037, overlap 2699037 AACTAAGAAACAAAA GAAAGGCTGT CTTGTC ACAGCCTTTT TTTCAACGCTTCGAT TERM 3761 2699037 - 2699054 + T 91 -7 -5.41746 | opp_overlap 2699033 2699037 AAGAAACAAAAGAAA GGCTGT CTTGTC ACAGCC TTTTTTTCAACGCTT TERM 3762 2699054 - 2699037 - T 85 -7 -5.02645 | opp_overlap 2699037, overlap 2699033 AAGAAACAAAAGAAA GGCTGT CTTGTC ACAGCC TTTTTTTCAACGCTT Ctha_2248 2700009 - 2699047 - | hypothetical protein TERM 3763 2699226 - 2699241 + g 70 -9 -3.46081 | GAATTCCCTGCTGAA GGCCTT GCTG AAGGCC TTGCTTAATTCCCTG TERM 3764 2700072 - 2700106 + r 100 -12.4 -5.11033 | gap 1, opp_overlap 2700077 AGCGTATTCGGGCAA GCAAAGACGAAGGTG AAAGTG CAC-TTCGTCTTTGC TTTTTTGGAGTTATA Ctha_2249 2701469 - 2700117 - | phosphodiesterase I TERM 3765 2702434 - 2702419 - g 78 -6.1 -4.57516 | ATAGCGAAATCAAAA CCAGG GCATGG CCTGG CCGCAGTAATTAAAG TERM 3766 2703633 - 2703590 - g 93 -11.8 -3.7511 | gap 1, opp_overlap 2703595 2703596 2703621 TTTTTCATAACACAA GCGACA-CCACCTACTTCGTT ACG AACGAAGCCGGCGGATTTCGC GGTGTAATTACACTG TERM 3767 2703830 - 2703815 - g 79 -2.6 -5.40072 | gap 1, opp_overlap 2703795 TTGTTTCTAAAAAAA CCAA-CA AGC TGATTGG GATTGTCAAGCATGA Ctha_2250 2702035 - 2703912 + | Chloride channel core Ctha_2251 2704499 - 2704038 - | thioesterase superfamily protein TERM 3768 2704463 - 2704477 + g 74 -3.5 -5.02476 | CAAGGGTTAAGTCTT CGGGA AAGAG TCCTG TTTTTTGAGCAATGT Ctha_2252 2706315 - 2704513 - | AMP-dependent synthetase and ligase TERM 3769 2705283 - 2705259 - G 88 -3.6 -5.75342 | gap 1, overlap 2705261 CTGCCGCAAAAAAAA GTTTTGCAAGC CTGG GCT-GCAAAGC CGCCCCACCTGAAAC TERM 3770 2705465 - 2705483 + g 72 -6 -4.5265 | TTTATGCCGGTGAGC TCGTTTCC TTT GGAAAGGA TTTTATCATATACTT TERM 3771 2706620 - 2706607 - H 79 -3.9 -5.46706 | ATTTTAAAATAAAAA CTAAA ATAA TTTAG AAAAAATCAAACCTA TERM 3772 2706659 - 2706686 + H 73 -7.2 -4.17048 | opp_overlap 2706661 TTTATTACCTTGCAA TACGTTATATAT GAAA AAATATAACGTA TTCTTTTAGAAAGGA TERM 3773 2707350 - 2707332 - g 85 -12.4 -3.34895 | GGCACTTTTAACCAA CGCGACCG CTT CGATCGCG ATAAAAGCACGCTTG TERM 3774 2707793 - 2707824 + G 78 -5 -5.00196 | overlap 2707821 CACCAGCCACAACGT GCACAACTTGGGGG TTTT CCTGCAAGATGAGC TTTTGTTCTTTCAGC Ctha_2253 2706708 - 2708624 + | TonB-dependent receptor TERM 3775 2708801 - 2708773 - g 81 -3.9 -5.35354 | gap 1, overlap 2708775 CACAGAAGGAAAAAA CA-CAGCTTCGG AAAAAG CTGAAGCTGATG GCCAAAATACGGCAT TERM 3776 2708798 - 2708775 - g 72 -6.7 -4.29187 | overlap 2708773 CAGAAGGAAAAAACA CAGCTTCGG AAAAAG CTGAAGCTG ATGGCCAAAATACGG Ctha_2254 2708627 - 2709178 + | hypothetical protein TERM 3777 2709206 - 2709186 - f 83 -11.2 -3.69434 | opp_overlap 2709186, overlap 2709190 CGAAGTAATGTTAAA GAAAGGCG TCCCC CGCCTTTC TTTTTTTCTGCCAGA TERM 3778 2709186 - 2709206 + F 100 -11.2 -5.60993 | opp_overlap 2709186 2709190 CGAAGTAATGTTAAA GAAAGGCG TCCCC CGCCTTTC TTTTTTTCTGCCAGA TERM 3779 2709202 - 2709190 - f 72 -6.2 -4.46233 | opp_overlap 2709186, overlap 2709186 GTAATGTTAAAGAAA GGCG TCCCC CGCC TTTCTTTTTTTCTGC TERM 3780 2711809 - 2711837 + G 72 -8.2 -3.76232 | opp_overlap 2711770 2711771 2711815 GCTACGCCGGCGACG CCGAAATTCACG CGGGC TGTGAACTTCGG TTGTATCTTTCAAAA Ctha_2255 2709330 - 2712086 + | hypothetical protein TERM 3781 2712319 - 2712335 + F 84 -2.1 -5.72207 | opp_overlap 2712319 2712320, overlap 2712318 ATCAACAACAAAAAC GCCGGCA GCC TGGGGGC TTTTTTTCGTTTCAA TERM 3782 2712800 - 2712790 - g 80 -5.4 -4.91852 | TTGATGAAAAAGAAA CGAA CCT TTCG GAAACGATTCGCGCG Ctha_2256 2712375 - 2714531 + | hypothetical protein Ctha_2257 2714573 - 2714986 + | hypothetical protein TERM 3783 2716220 - 2716230 + G 74 -8.2 -4.01101 | AAAATCTTGACAGCT CGCG GCT CGCG TTGTTCTTCCCTTTC Ctha_2258 2715028 - 2716872 + | hypothetical protein Ctha_2259 2717113 - 2717424 + | hypothetical protein Ctha_2260 2717432 - 2717923 + | hypothetical protein TERM 3784 2717936 - 2717966 + F 77 -8.4 -3.96892 | TAAAATTTTTGTTTC GGTTGCAGCA TCCCCCTTATC TGCTGCAACC TTTATCATCCAGCTT Ctha_2261 2718141 - 2718683 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 3785 2718709 - 2718731 + F 100 -12.8 -5.14563 | opp_overlap 2718709 CAAACTTGAAGGAAA CGCCTTGCAA CTT TTGTAAGGCG TTTTTTCATAAAAAC TERM 3786 2718731 - 2718709 - f 85 -10.6 -3.9444 | opp_overlap 2718709 CAAACTTGAAGGAAA CGCCTTGCAA CTT TTGTAAGGCG TTTTTTCATAAAAAC TERM 3787 2719147 - 2719133 - g 75 -6.4 -4.4078 | CCGCCGGAATCAAAA TGACCA TCA TGGCCA GGCCAGGGCTTGGCA Ctha_2262 2718757 - 2719335 + | alkylhydroperoxidase like protein, AhpD family Ctha_2263 2721168 - 2719465 - | single-stranded-DNA-specific exonuclease RecJ TERM 3788 2721914 - 2721900 - g 72 -4.9 -4.56729 | overlap 2721901 ACGAAAATATCAAAA CGCCG AAGCG CGGCA AGATTTACTCCATGA Ctha_2264 2721305 - 2722354 + | Inositol phosphatase/fructose-16-bisphosphatase TERM 3789 2722400 - 2722429 + T 91 -13.7 -2.71712 | opp_overlap 2722406, overlap 2722406 2722427 AAGTACAGTTCGAAC AAAAAAGCCCGCT TAAG AGCGGGCTTTTTA CTTTCCAAAAGAAAG TERM 3790 2722406 - 2722423 + T 100 -12.7 -4.98531 | opp_overlap 2722406, overlap 2722400 AGTTCGAACAAAAAA GCCCGCT TAAG AGCGGGC TTTTTACTTTCCAAA TERM 3791 2722423 - 2722406 - T 100 -12.7 -5.45652 | opp_overlap 2722406 2722400 AGTTCGAACAAAAAA GCCCGCT TAAG AGCGGGC TTTTTACTTTCCAAA Ctha_2265 2723388 - 2722450 - | hypothetical protein Ctha_2266 2723645 - 2723974 + | small multidrug resistance protein TERM 3792 2724022 - 2723997 - T 100 -15.5 -5.40072 | opp_overlap 2723999 CGTGTTCGAAAAAAA GAGGCCGTGCA AAAA TGCACAGCCTC ATTCAAATTACATGT TERM 3793 2723999 - 2724020 + T 74 -10.1 -2.7566 | opp_overlap 2723997 TGTTCGAAAAAAAGA GGCCGTGCA AAAA TGCACAGCC TCATTCAAATTACAT Ctha_2267 2725228 - 2724050 - | succinyl-CoA synthetase, beta subunit TERM 3794 2724736 - 2724725 - G 91 -7.2 -5.54885 | opp_overlap 2724725 AAGACCAAGAAAAAA CGCG GCCT CGCG TGCTTGGTTTGGCTG TERM 3795 2725181 - 2725154 - G 87 -10.6 -4.07568 | CTCCTCTGCCGAAAA CGCCACAATTCC CTTC GGAACCGTGACG CCAAAGCCACGCAAA Ctha_2268 2725839 - 2725324 - | hypothetical protein Ctha_2269 2726925 - 2726140 - | hypothetical protein TERM 3796 2727022 - 2727038 + r 83 -10.9 -3.5944 | opp_overlap 2727022 GAGTAAACGAAAAAA GGGCTTT TAG AAAGCCC TTTCACGCTCTAAAT TERM 3797 2727038 - 2727022 - R 100 -10.9 -5.40004 | opp_overlap 2727022 GAGTAAACGAAAAAA GGGCTTT TAG AAAGCCC TTTCACGCTCTAAAT Ctha_2270 2727790 - 2727083 - | hypothetical protein TERM 3798 2727632 - 2727612 - GR 77 -10.5 -3.02166 | overlap 2727609 TGGCCAAGTAAACTA TCCGACACA GTT TGTGTCGAA TCCGATTCGCGAATA Ctha_2271 2728064 - 2727759 - | hypothetical protein Ctha_2272 2728264 - 2730363 + | carboxyl-terminal protease TERM 3799 2730402 - 2730428 + F 95 -14 -3.05935 | opp_overlap 2730406, overlap 2730406 TTTCAGGATTATCGA TAAACCCTAAAA TAT TTTTAGGGTTTA TTAAGTGGCCGGTGT TERM 3800 2730406 - 2730424 + F 87 -10.4 -4.20516 | opp_overlap 2730406, overlap 2730402 AGGATTATCGATAAA CCCTAAAA TAT TTTTAGGG TTTATTAAGTGGCCG TERM 3801 2730424 - 2730406 - f 85 -10.4 -3.93963 | opp_overlap 2730406 2730402 AGGATTATCGATAAA CCCTAAAA TAT TTTTAGGG TTTATTAAGTGGCCG TERM 3802 2730754 - 2730770 + F 73 -3 -5.22794 | overlap 2730767 GCATTTTTTTCTATC TTAGCG GTCTA TGCTAA TTTTTTAGTGCTTCT Ctha_2273 2730799 - 2731467 + | cyclic nucleotide-binding protein Ctha_2274 2733405 - 2731609 - | hypothetical protein TERM 3803 2731727 - 2731717 - G 73 -4.6 -4.77438 | ATCCACCATCAAAAA CAGG TAG CCCG TGTCGCCGTAGTTTG TERM 3804 2732358 - 2732345 - G 76 -2.4 -5.40072 | overlap 2732357 TCCTCCGTAAAAAAA CGTT TCACCG AACG ATACTTGCCGTTTCG Ctha_2275 2734474 - 2733503 - | hypothetical protein Ctha_2276 2736321 - 2734642 - | PEGA domain protein TERM 3805 2734787 - 2734802 + g 84 -7.6 -4.82154 | CCCCACTTACGCTTT GGAGTA CTTA TACTCC TTTTTACTCTAACTT TERM 3806 2735003 - 2735018 + g 84 -7.6 -4.82154 | CCCCAATCACACTTT GGAGTA CTTA TACTCC TTTTTACTCTAACTT TERM 3807 2737510 - 2737541 + G 71 -3.6 -4.82901 | gap 1, opp_overlap 2737509 CTGAAACAAAAATTG TCGCTGGAAGAAGCC CAC GCCCGCTTCC-GCGA TTTTTATAAAAACGA Ctha_2277 2736715 - 2737782 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 3808 2738659 - 2738647 - g 79 -9.1 -4.08064 | opp_overlap 2738646 2738647 AATCGGGTTCCAAAA TGCCG CCG CGGCA ATTATGACGACGGAT Ctha_2278 2738180 - 2739424 + | arginine biosynthesis bifunctional protein ArgJ TERM 3809 2739989 - 2740012 + G 74 -8.1 -3.89822 | gap 1 TTCGCCTGATCAGTT CGCACGGCGG AAAAG CCGTCG-GCG TTTCTGGGCTCGATG Ctha_2279 2739613 - 2740536 + | acetylglutamate kinase TERM 3810 2740755 - 2740742 - g 78 -6.7 -4.56597 | opp_overlap 2740742 2740740 TTTGCCGCTTAAAAA TCGCA CGGT TGCGA TGATTTTTGAAAAAC TERM 3811 2741455 - 2741431 - g 71 -7.1 -4.15222 | opp_overlap 2741443 2741446 AGCGCGGCGAAGAAA TCACCAACGAC GTG ATCGATGGCGA ACAATCGATTATTTT Ctha_2280 2740551 - 2741606 + | ornithine carbamoyltransferase Ctha_2281 2741655 - 2742101 + | arginine repressor, ArgR TERM 3812 2743141 - 2743129 - g 70 -4.7 -4.39318 | CAACGAAACGCAAAA GCCAG TAA CAGGC ATGGTTCGTCTGAAG Ctha_2282 2742119 - 2743393 + | Argininosuccinate synthase TERM 3813 2743424 - 2743444 + T 100 -12.6 -4.00532 | TAATTTGCATTTCAG GGCGAGCT TTTTT AGCTCGCC TTTACTATTTCAGGA TERM 3814 2743563 - 2743536 - T 100 -8.4 -6.04324 | opp_overlap 2743536 TCAAAAAATAAAAAA GGGAAACAACGC ATCA GCCCTGCTTCCC TTTTCAAAAATAGAT Ctha_2283 2744641 - 2743592 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Ctha_2284 2744786 - 2745730 + | ribose-phosphate pyrophosphokinase Ctha_2285 2745782 - 2746381 + | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 3815 2746429 - 2746401 - T 77 -6.8 -4.61868 | gap 1, opp_overlap 2746403 2746408, overlap 2746403 2746408 CATCTACACAGAAAA TGCAAAAGGCAGC GTAC GCTGCCTTTT-CT TATTTATACATTTTC TERM 3816 2746403 - 2746428 + T 85 -10.5 -4.13814 | opp_overlap 2746403 2746401 2746408, overlap 2746408 TCTACACAGAAAATG CAAAAGGCAGC GTAC GCTGCCTTTTC TTATTTATACATTTT TERM 3817 2746428 - 2746403 - T 76 -10.5 -2.61116 | opp_overlap 2746403 2746408, overlap 2746401 2746408 TCTACACAGAAAATG CAAAAGGCAGC GTAC GCTGCCTTTTC TTATTTATACATTTT TERM 3818 2746408 - 2746423 + T 93 -10.4 -5.05116 | opp_overlap 2746403 2746401 2746408, overlap 2746403 ACAGAAAATGCAAAA GGCAGC GTAC GCTGCC TTTTCTTATTTATAC TERM 3819 2746423 - 2746408 - T 89 -10.4 -4.46854 | opp_overlap 2746408 2746403, overlap 2746403 2746401 ACAGAAAATGCAAAA GGCAGC GTAC GCTGCC TTTTCTTATTTATAC Ctha_2286 2746828 - 2746457 - | response regulator receiver protein TERM 3820 2747030 - 2747020 - H 71 -4 -4.90381 | opp_overlap 2747020, overlap 2747015 GTGAACATAACAAAA GTTT CTG AAAC ATTTGCGACCAAGCC TERM 3821 2747464 - 2747484 + G 73 -2.5 -5.21709 | ATTTAGAATTCAGTT GATTGTTGG CAG CCTAAAATC TTTTTTCCTATCCGC Ctha_2287 2747273 - 2748802 + | binding-protein-dependent transport systems inner membrane component TERM 3822 2748813 - 2748836 + F 79 -4.6 -5.21683 | opp_overlap 2748813 ATTAATTAACAAACC GCTTTCTCAT ATCG ATAGGAAAGC TTTCTTTTTTTCAAT Ctha_2288 2748944 - 2749765 + | cytochrome c assembly protein TERM 3823 2749902 - 2749884 - f 79 -2.4 -5.53288 | CGTAAGCTAAAAAAA CAAGCTAA CTA TGAACTTG ATCGCCGTAGGAGTA Ctha_2289 2749894 - 2751207 + | glutamyl-tRNA reductase TERM 3824 2751663 - 2751673 + G 71 -6.8 -4.07568 | GGCAACTTGAACACT CGCT TTA AGCG TTTTGAGGAAGGCGA Ctha_2290 2751204 - 2752148 + | porphobilinogen deaminase TERM 3825 2752791 - 2752769 - g 73 -4.2 -4.89567 | gap 1, overlap 2752764 2752762 CCTGAAAAGACAAAA GTTG-CGTC TATCGG GACGACAAC CTCTGGCGCCCTTAC Ctha_2291 2752145 - 2752891 + | Uroporphyrinogen III synthase HEM4 TERM 3826 2752870 - 2752907 + T 74 -10.2 -2.80975 | gap 2, opp_overlap 2752872 2752881, overlap 2752869 2752879 GGGACTTGCCGAAGC CATTG--CGAACAGTCTT TATT AAGACTGTTCGGTCAATG CTTTGCATAATGCGT Ctha_2292 2753868 - 2752888 - | Patatin TERM 3827 2753639 - 2753625 - G 72 -2.8 -5.04385 | CAGAGTTTGAAAAAA TTGTAG TCC CTTCAA CCTCATATAGAGAAA Ctha_2293 2755130 - 2753994 - | transposase IS4 family protein Ctha_2294 2755933 - 2755154 - | Methyltransferase type 12 TERM 3828 2756045 - 2756009 - R 70 -6 -4.32651 | gap 1, opp_overlap 2756012 2756016, overlap 2756011 2756016 AAGAAGTGATTAAAA TGC-GAAAGGCGAAC TCAAGCCT GTTCGCCTTTCTGTA ATTCTTATCTTGTAA TERM 3829 2756012 - 2756041 + r 87 -12.3 -3.06117 | opp_overlap 2756011 2756009 2756016, overlap 2756016 AAGTGATTAAAATGC GAAAGGCGAAC TCAAGCCT GTTCGCCTTTC TGTAATTCTTATCTT TERM 3830 2756037 - 2756016 - R 70 -7.3 -3.77484 | opp_overlap 2756012 2756016, overlap 2756011 2756009 GATTAAAATGCGAAA GGCGAAC TCAAGCCT GTTCGCC TTTCTGTAATTCTTA TERM 3831 2756016 - 2756037 + r 73 -7.3 -4.17263 | opp_overlap 2756016 2756011 2756009, overlap 2756012 GATTAAAATGCGAAA GGCGAAC TCAAGCCT GTTCGCC TTTCTGTAATTCTTA TERM 3832 2756079 - 2756101 + r 75 -2.1 -5.35459 | gap 1, opp_overlap 2756084, overlap 2756082 2756084 ATCCACATAAGTGGC TGAA-AGCGT TTAT ACGCTGTTTA TTTTTTCTGATATGT TERM 3833 2756082 - 2756097 + r 71 -3.2 -5.1471 | opp_overlap 2756084, overlap 2756079 2756084 CACATAAGTGGCTGA AAGCGT TTAT ACGCTG TTTATTTTTTCTGAT Ctha_2295 2757017 - 2756256 - | histidinol-phosphate phosphatase Ctha_2296 2757707 - 2757120 - | hypothetical protein Ctha_2297 2759858 - 2757750 - | dehydrogenase E1 component TERM 3834 2758566 - 2758604 + g 70 -2.3 -5.03314 | overlap 2758567 TCCTACAATGAAATC CTCCGCAATCGGCGCGT TGAAC ACCCGCTCATTGCCGAA TTTTTTGAGCATCCC TERM 3835 2759381 - 2759367 - G 78 -6.4 -4.63486 | opp_overlap 2759367 ACCGCCGGAATAAAA GGCAAT CTC ATCGCC GTTATATTTCTTAAT Ctha_2298 2760211 - 2761197 + | Porphobilinogen synthase TERM 3836 2761218 - 2761270 + F 72 -5.9 -4.3953 | gap 1, opp_overlap 2761231, overlap 2761220 2761231 ATTTTACATTTTGCA TTTGA-AAGAAAAACTCTCTTGTG AAGTTC CTCAAGGGAGTTTTTCTTATTATA TTTATTATAGTTAGA TERM 3837 2761220 - 2761268 + F 75 -8.5 -3.79611 | gap 1, opp_overlap 2761231, overlap 2761218 2761231 TTTACATTTTGCATT TGA-AAGAAAAACTCTCTTGTG AAGTTC CTCAAGGGAGTTTTTCTTATTA TATTTATTATAGTTA TERM 3838 2761256 - 2761231 - f 76 -3.9 -5.28942 | opp_overlap 2761231 2761220 2761218 CATTTGAAAGAAAAA CTCTCTTGTGA AGTT CCTCAAGGGAG TTTTTCTTATTATAT TERM 3839 2761231 - 2761256 + F 83 -5.4 -5.35721 | opp_overlap 2761231, overlap 2761220 2761218 CATTTGAAAGAAAAA CTCTCTTGTG AAGTTC CTCAAGGGAG TTTTTCTTATTATAT Ctha_2299 2761318 - 2762496 + | Chorismate synthase Ctha_2300 2762559 - 2763353 + | leucine-rich repeat-containing protein typical subtype TERM 3840 2763368 - 2763415 + T 95 -14.6 -2.84051 | opp_overlap 2763381, overlap 2763381 AAGTTTTAGCGTCCA TCAAATAAAAAAAGCCAAGTTT TTTG AAACTTGGCTTTTTTTATTTCC CTTTCCTGCCGATGA TERM 3841 2763402 - 2763381 - T 100 -11.7 -5.99154 | opp_overlap 2763381 2763368 CATCAAATAAAAAAA GCCAAGTTT TTTG AAACTTGGC TTTTTTTATTTCCCT TERM 3842 2763381 - 2763402 + T 100 -11.7 -5.96894 | opp_overlap 2763381, overlap 2763368 CATCAAATAAAAAAA GCCAAGTTT TTTG AAACTTGGC TTTTTTTATTTCCCT Ctha_2301 2764780 - 2763443 - | hypothetical protein TERM 3843 2763533 - 2763523 - G 72 -2.6 -5.0538 | opp_overlap 2763523 CCTGATCGGAAAAAA TAAA TTT TTTA TTGATCGGGCTATCG TERM 3844 2764262 - 2764243 - G 80 -7.2 -4.56775 | overlap 2764260 ACTTTTTTCCAAAAA GGCCTTTT CCAG AAAAAGCC AAAGGAATTAGCTTA TERM 3845 2765007 - 2764986 - H 71 -4.3 -4.83169 | overlap 2764987 2764990 AGCTTTGCATAAAAA GGTAGTGGG CTGC CCCCCTAAC TAGGCAACCCACCGC TERM 3846 2765019 - 2764990 - H 72 -9.3 -2.88667 | overlap 2764986 2764987 TTGCATAAAAAGGTA GTGGGCTGCCC CCCTAACT AGGCAACCCAC CGCGGCTGGAGAGAG Ctha_2302 2765252 - 2765704 + | SsrA-binding protein Ctha_2303 2765726 - 2766934 + | tyrosyl-tRNA synthetase TERM 3847 2766961 - 2766971 + F 81 -3.2 -5.64304 | ACGATTAAAGTCCAT CTTC TTT GAGG TTTTTTATTATCTTC Ctha_2304 2767033 - 2767581 + | arginine decarboxylase, pyruvoyl-dependent TERM 3848 2767635 - 2767619 - f 100 -9.4 -5.84381 | opp_overlap 2767619 TCACGAACAAAAAAA GGACGC TGTGT GCGTCC TTTTTTACTTGGAAC TERM 3849 2767619 - 2767635 + F 100 -9.4 -5.26875 | opp_overlap 2767619 TCACGAACAAAAAAA GGACGC TGTGT GCGTCC TTTTTTACTTGGAAC TERM 3850 2767872 - 2767854 - g 74 -6 -4.61231 | opp_overlap 2767854 CGATACGTTCAAAAA TGGCATTA TGT TAGTGCCA TCTATCGGTATTCCG Ctha_2305 2767807 - 2768052 + | hypothetical protein TERM 3851 2768119 - 2768077 - T 83 -11.5 -3.09004 | gap 1, opp_overlap 2768077, overlap 2768074 TGATGGTTAAAACGA CGCCGCCAAACAAATACATC TATT GA-GAATTTATTTGACGGCG TTCTTCTGTTTCTGC TERM 3852 2768077 - 2768119 + T 73 -7.1 -4.06866 | gap 1, opp_overlap 2768077 2768074 TGATGGTTAAAACGA CGCCGCCAAACAAATACATC TATT GA-GAATTTATTTGACGGCG TTCTTCTGTTTCTGC Ctha_2306 2769560 - 2768160 - | Radical SAM domain protein TERM 3853 2769874 - 2769915 + r 79 -5.9 -4.96276 | opp_overlap 2769870 2769886, overlap 2769880 2769883 2769886 CCGAAAAAACGTTTG GCAACAAAAAAAGCTGCCT TGAT AGGCAGCTTCTTCTTTTGA TTTTCGTTTTTTTAT TERM 3854 2769880 - 2769909 + r 84 -7.9 -4.74084 | opp_overlap 2769870 2769886, overlap 2769874 2769883 2769886 AAACGTTTGGCAACA AAAAAAGCTGCCT TGAT AGGCAGCTTCTTC TTTTGATTTTCGTTT TERM 3855 2769883 - 2769906 + r 86 -9.6 -4.43392 | opp_overlap 2769886, overlap 2769880 2769874 2769886 CGTTTGGCAACAAAA AAAGCTGCCT TGAT AGGCAGCTTC TTCTTTTGATTTTCG TERM 3856 2769886 - 2769903 + r 88 -11.3 -4.27914 | opp_overlap 2769886, overlap 2769883 2769880 2769874 TTGGCAACAAAAAAA GCTGCCT TGAT AGGCAGC TTCTTCTTTTGATTT TERM 3857 2769903 - 2769886 - R 100 -11.3 -5.7946 | opp_overlap 2769886 2769883 2769880 2769874 TTGGCAACAAAAAAA GCTGCCT TGAT AGGCAGC TTCTTCTTTTGATTT Ctha_2307 2770152 - 2769937 - | hypothetical protein TERM 3858 2770524 - 2770495 - g 72 -9.3 -3.53224 | opp_overlap 2770486 GACTGGTTGGCGAAA CGCTCAATCGCTT CATC AAGCGACTACGCG TTGAAAAAGCAGCCC Ctha_2308 2770311 - 2771306 + | transcriptional regulator, AraC family TERM 3859 2771356 - 2771338 - T 100 -11.7 -5.30348 | opp_overlap 2771338 AGGGAAGAATAAAAA GGCGGCT TTTTG AGCCGCC TTTCTTGAATTCTAA TERM 3860 2771338 - 2771356 + T 95 -12.4 -4.27467 | opp_overlap 2771338 AGGGAAGAATAAAAA GGCGGCTT TTT GAGCCGCC TTTCTTGAATTCTAA Ctha_2309 2772663 - 2771368 - | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 3861 2774007 - 2773989 - g 100 -3.9 -5.82388 | gap 1 AAACTCGAAAAAAAA TTGTAGCG ATCA CGCT-CAA GTCCGACGACTTTCA TERM 3862 2774089 - 2774063 - g 75 -3.1 -5.13016 | AAGGAAAATGAAAAA CGCTACGG-CAAA CTC TTTATCCGT-GCG GTCAGAGACGACAAA TERM 3863 2774589 - 2774565 - g 85 -3.6 -5.5112 | gap 1, opp_overlap 2774572, overlap 2774570 CGTATGAAGAAAAAA TCAAGCAGCTG TCAA CGGCTG-TTGA ACAAAGTGCGAATGC TERM 3864 2776617 - 2776605 - g 76 -4.7 -4.76123 | AAACTATTAATAAAA GCACG CGA CGGGC AAAAAATCTCATTCA TERM 3865 2776821 - 2776803 - g 76 -9 -3.76952 | opp_overlap 2776802 GCGATCCAACCCAAA TTCATCAA GTT TTGATGAA CCTTTGCGTGAATGC TERM 3866 2776905 - 2776887 - g 72 -3.1 -5.0538 | TTTCATCGGAAAAAA TCAGCCT ATCCG AAGCCGA AACAAAATTGCACAT TERM 3867 2776928 - 2776913 - g 73 -4 -4.90525 | GAAGCCGAAACAAAA TTGCAC ATCG ATGCAA AAGCTGGCAACTATA TERM 3868 2777311 - 2777330 + G 70 -10 -3.09273 | ATTTTGCGCCAGCGA TGGCAGCC AAGC GGTTGCCA TATATGTTGAGCACA Ctha_2310 2772950 - 2777584 + | PAS/PAC sensor hybrid histidine kinase TERM 3869 2778172 - 2778162 - g 73 -4.6 -4.84363 | GGAAATGATCAAAAA GCGA TAG CCGC TTACGAACAAGCCAT Ctha_2311 2777808 - 2779595 + | TPR repeat-containing protein TERM 3870 2779589 - 2779579 - T 100 -6.8 -5.75945 | opp_overlap 2779578, overlap 2779581 ATGCGCTAAAAAAAA GAGG CTA CCTC CATTAATCATCCAAG Ctha_2312 2780610 - 2779663 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Ctha_2313 2781192 - 2780680 - | Thymidine kinase Ctha_2314 2781919 - 2781236 - | cytidine deaminase TERM 3871 2781316 - 2781338 + g 84 -7.8 -4.80882 | opp_overlap 2781309 CGTTAAATGCTTCAG GCAAAAGCTT CTG GAGTTTTTGC TTTTTCATCTCGCCT Ctha_2315 2783098 - 2782001 - | peptidase M24 TERM 3872 2782048 - 2782038 - G 76 -8.2 -4.10657 | GCAGATTTTTGAAAA GGCG TTG CGCC AGACTCACTTAGCAA TERM 3873 2782729 - 2782707 - G 79 -2.6 -5.4477 | overlap 2782709 AAATTTTCAAAAAAA GCCGGCTTTG GGA CAAAGTCCAC ATCAGGCAGATCTGA TERM 3874 2784508 - 2784482 - g 75 -2.8 -5.10029 | opp_overlap 2784481 2784483, overlap 2784483 2784486 ACCAACGTGAAAAAA GGGATGCCCGCT TAT AGCGAGGAAACC TTTGGGCCGGTCGCG Ctha_2316 2783417 - 2784793 + | Aldehyde Dehydrogenase TERM 3875 2784911 - 2784922 + G 71 -7.2 -4.07568 | TTTGCCGCTCTCCCA CCGC CGCC GCGG TTTTCAAAAAGACGG Ctha_2317 2784850 - 2785350 + | protein tyrosine phosphatase TERM 3876 2785460 - 2785479 + F 100 -13.6 -3.72576 | opp_overlap 2785469 TGATGAGCGATGTAG GGGCAGAC ATGT GTCTGCCC TTTCGTCCGAAGCAA TERM 3877 2785662 - 2785639 - g 73 -8 -4.10657 | overlap 2785642 CCACACGCCGGAAAA CATCCGCAGC CTTA GCGGCGGGTG CGTAGGGGAAGTTTA Ctha_2318 2785583 - 2786440 + | fructosamine kinase Ctha_2319 2786521 - 2787252 + | RNA methyltransferase, TrmH family, group 3 TERM 3878 2787310 - 2787289 - f 70 -7.2 -3.8637 | overlap 2787287 2787300 CGACATGAGAAAACA GGGCGAGC ACATAG GTTCGCCC CTACAAATCAACCGA Ctha_2320 2787932 - 2788342 + | hypothetical protein Ctha_2322 2788807 - 2788586 - | hypothetical protein Ctha_2323 2789452 - 2788859 - | electron transport protein SCO1/SenC TERM 3879 2788955 - 2788975 + g 79 -4 -5.2422 | overlap 2788959 TCCGCAAATGCGGGC TTCGTCGT CCAAT AAGACGAA TTTTTTGCTATACTT Ctha_2324 2790408 - 2789458 - | cytochrome oxidase assembly TERM 3880 2789655 - 2789667 + g 70 -4.7 -4.5187 | overlap 2789659 TCGTATTGCTCACGA GCGCC GAA GGCTC TTTGCTTTTTTTCAA Ctha_2325 2791311 - 2790436 - | hypothetical protein Ctha_2326 2791843 - 2791559 - | hypothetical protein Ctha_2327 2792035 - 2791853 - | hypothetical protein TERM 3881 2791958 - 2791939 - G 75 -2.8 -5.20606 | overlap 2791941 AAATACTAACAAAAA TAGCCTCA TCCC TGAGTCCA CTAAGTAACAGAAAA TERM 3882 2792167 - 2792189 + r 79 -10.8 -3.03124 | opp_overlap 2792170, overlap 2792170 CTATACTTCCTTACA GAATGAAAAT ATT ATTTTCATTC TGTTCGAACATGCCC Ctha_2328 2792600 - 2792205 - | hypothetical protein TERM 3883 2792255 - 2792279 + g 79 -9.9 -3.79473 | GATGCCGCTTAATTC GCGCATGCCGC TTG GCCGCATTCGC TTTGCCTCTTGTCGT TERM 3884 2792422 - 2792412 - G 93 -6.8 -5.79595 | GCCTAAAATAAAAAA CAGC GCC GCTG AACCGTAGCCAATTA TERM 3885 2792455 - 2792476 + g 72 -5.1 -4.69415 | overlap 2792445 TCATTGAGAAGCATT TTGGAGGAA ACCG TTCCGCCGA TTTGTTTCTCTTGGT TERM 3886 2792492 - 2792503 + g 70 -2.2 -5.09173 | TTTGTTTCTCTTGGT TTCG CTGA CGGA TTTTTTCCCCTATTC TERM 3887 2792651 - 2792678 + r 91 -9.9 -4.72486 | opp_overlap 2792651 ATAGTAATAGAAAAA GCCGACTATTG AAAACC CAATAGCCGGC TTTTTAAGATTTGTA TERM 3888 2792678 - 2792651 - R 100 -12.8 -5.13344 | opp_overlap 2792651 ATAGTAATAGAAAAA GCCGACTATTGA AAAC CCAATAGCCGGC TTTTTAAGATTTGTA Ctha_2329 2793601 - 2792705 - | TonB family protein TERM 3889 2792839 - 2792850 + g 82 -3 -5.61881 | CCGAATCAGCCGGCT TCTT TTTC AAGA TTTTTGTTTTTACCG Ctha_2330 2794161 - 2793598 - | Biopolymer transport protein ExbD/TolR TERM 3890 2793739 - 2793750 + g 73 -2.2 -5.25803 | CACATCAACCAGGTT GCGA TATT TTGC TTTTTTGTCCAGCTT Ctha_2331 2794736 - 2794212 - | hypothetical protein Ctha_2332 2795513 - 2794761 - | MotA/TolQ/ExbB proton channel TERM 3891 2795474 - 2795454 - G 93 -9.7 -4.63586 | ACACCACATATAAAA GCCTAATGC GAC GCAGTAGGC AACAACCATCAATAT Ctha_2333 2796657 - 2795632 - | ferrochelatase TERM 3892 2795731 - 2795719 - G 73 -7.7 -4.04764 | opp_overlap 2795719, overlap 2795713 AAAATAACTTATAAA TTCCG GCT CGGAA TTGATACTATCTATA TERM 3893 2795767 - 2795751 - G 83 -9.5 -4.07124 | opp_overlap 2795750 2795751 TACTATCTATATAAA TGGCATT TCT AATGCCA CTTTTGAAGAGCTCT TERM 3894 2795751 - 2795767 + g 70 -9.5 -3.05224 | opp_overlap 2795751, overlap 2795750 TACTATCTATATAAA TGGCATT TCT AATGCCA CTTTTGAAGAGCTCT Ctha_2334 2797548 - 2796934 - | diguanylate cyclase (GGDEF domain) TERM 3895 2797519 - 2797506 - G 72 -5.2 -4.62102 | opp_overlap 2797506 ATAAAAAGAGGAAAA CGGC AATATA GCCG ATATTGATTGACTTA Ctha_2335 2797971 - 2797639 - | hypothetical protein TERM 3896 2797874 - 2797903 + g 100 -15.1 -3.494 | overlap 2797875 TCTTTTTCATCCGCC CGTAGGGACATGC CATG GCATGTCCCTACA TTGTCTCGAACCTTG TERM 3897 2797875 - 2797902 + g 100 -18.6 -2.69319 | overlap 2797874 CTTTTTCATCCGCCC GTAGGGACATGC CATG GCATGTCCCTAC ATTGTCTCGAACCTT TERM 3898 2797995 - 2797945 - G 72 -9.2 -3.50553 | overlap 2797943 2797948 2797954 GAAGAGGATGAAAGA CAGGATAAAGGCAAAATACAGA TTCATCT TCCGCCTTTTGCCTTTATCACG CTCATCAGGCCAATC TERM 3899 2797992 - 2797948 - G 76 -11.7 -2.58215 | overlap 2797945 2797943 2797954 GAGGATGAAAGACAG GATAAAGGCAAAATACAGA TTCATCT TCCGCCTTTTGCCTTTATC ACGCTCATCAGGCCA Ctha_2336 2800061 - 2798151 - | protein of unknown function DUF323 TERM 3900 2800169 - 2800200 + H 87 -12.4 -3.14468 | opp_overlap 2800178 CAAGGTTCAGACATT TTGTAGAGATGCAC GGCG GTGCGTCTCTACGG TTCGGTATCGTGCCA TERM 3901 2800785 - 2800773 - g 86 -2.7 -5.64421 | ATCGGAAATAAAAAA GTATC CTG AATAC CTTGCAGCCTATCCG Ctha_2337 2800441 - 2801052 + | hypothetical protein Ctha_2338 2801084 - 2801350 + | hypothetical protein TERM 3902 2801854 - 2801834 - T 95 -11.9 -4.14739 | opp_overlap 2801833 2801834 2801837, overlap 2801837 TCACCCATCGTAAAA CAAGGGGCT ATC AACCCCTTG CTGTCTTTAAAAAAA TERM 3903 2801834 - 2801854 + T 73 -9.7 -2.54325 | opp_overlap 2801834 2801837, overlap 2801833 2801837 TCACCCATCGTAAAA CAAGGGGCT ATC AACCCCTTG CTGTCTTTAAAAAAA TERM 3904 2801851 - 2801837 - T 75 -7.8 -4.19746 | opp_overlap 2801834 2801833 2801837, overlap 2801834 CCCATCGTAAAACAA GGGGCT ATC AACCCC TTGCTGTCTTTAAAA Ctha_2339 2802604 - 2801903 - | hypothetical protein Ctha_2340 2804877 - 2802937 - | protein of unknown function DUF323 TERM 3905 2804075 - 2804061 - G 73 -4.2 -4.74103 | GCTCGAAGGTAAAAA TGCCCG GCC CAAGCA TCACCTCCAGCGATT TERM 3906 2804758 - 2804778 + g 76 -8.9 -3.69216 | opp_overlap 2804758 2804757, overlap 2804757 GCTCACGTGAAAAAG GGACGGCAC GTA GAGCTGTCC TCTTTTGCCTAACGG TERM 3907 2804893 - 2804934 + r 72 -7.5 -3.73858 | gap 1, overlap 2804889 ATTTGGTTTGTTTGA TTTTTTGTAAGGG-CAGGTT CCG AACTTGTCCCCTACGAAAGA TTGGTTTTCGTCTCC Ctha_2341 2807094 - 2805283 - | hypothetical protein TERM 3908 2805652 - 2805664 + g 74 -5.5 -4.62069 | opp_overlap 2805652 CGCTTCGTTTGAAAG CGCCT GAA AGGTG TTTTTCACGTAGGAC TERM 3909 2807197 - 2807240 + r 70 -8.4 -3.22788 | gap 1, opp_overlap 2807197 2807196, overlap 2807196 2807200 CCTGGATGGAAATAC TAATGCCTCTCTTTTTCGTTT TAC GAGTGAATA-GAGAGGCATTA ATTATTATTTTTTAA Ctha_2342 2807667 - 2807245 - | hypothetical protein Ctha_2343 2809056 - 2807743 - | Molecular chaperone-like protein TERM 3910 2808756 - 2808790 + g 80 -5.6 -5.03994 | opp_overlap 2808756, overlap 2808758 TTGCATATTCAATCA GCCGTTTGAACAGGAG CGA CATCAGTTCAGACGAC TTTTTCTGTGTGCCG TERM 3911 2808935 - 2808959 + g 73 -7.7 -4.18494 | opp_overlap 2808936, overlap 2808936 TTGCCGACGTGAAAA AGGGACGGCAC GTA GAGCTGTCCCC TTTTGCCTAACGGTA TERM 3912 2808936 - 2808958 + g 75 -11.2 -3.10775 | opp_overlap 2808936, overlap 2808935 TGCCGACGTGAAAAA GGGACGGCAC GTA GAGCTGTCCC CTTTTGCCTAACGGT TERM 3913 2808958 - 2808936 - G 89 -9 -4.62069 | opp_overlap 2808936 2808935 TGCCGACGTGAAAAA GGGACGGCAC GTA GAGCTGTCCC CTTTTGCCTAACGGT Ctha_2344 2811282 - 2809219 - | hypothetical protein TERM 3914 2810848 - 2810862 + g 75 -6.4 -4.44608 | opp_overlap 2810848, overlap 2810845 GCCATAAAGGAAAAG GTCTTC ATC GGAGAC TTCTTTTTCAATCAA Ctha_2345 2812426 - 2811377 - | hypothetical protein TERM 3915 2813146 - 2813126 - R 75 -7.7 -4.16943 | opp_overlap 2813125 2813126 TTGGACAGTTCAAAA TCCAATAGA ATT TCTATTAGA GTTTCAATTCCACAT TERM 3916 2814595 - 2814578 - R 85 -7 -5.10208 | opp_overlap 2814580 GAAGCTCAATAAAAA CAGCAG TTTCGG CTGCTG TAAAAAAGTTTCAAT TERM 3917 2819284 - 2819267 - R 74 -7.7 -3.889 | gap 1, overlap 2819268 TGCAATTAGATGAAA CGTGCGCG TGA CGCGCA-G AAGGGAAAATTAAAA TERM 3918 2819702 - 2819661 - R 100 -9.5 -6.11392 | gap 1 AAACAAACAAAAAAA TCGTCGCCCCTCGAT-AGCC GAA AACTTACAGAGGGACGACGA CGCTTAAAACTGCCT Ctha_2346 2820340 - 2819813 - | CRISPR-associated protein Cas4 Ctha_2347 2820631 - 2820344 - | CRISPR-associated protein Cas2 TERM 3919 2820534 - 2820546 + g 71 -3.5 -4.7657 | TGAATATGATGCAGA TATTT TCG AAATA TTTTTAACATTTTTC Ctha_2348 2821792 - 2820638 - | CRISPR-associated protein Cas1 Ctha_2349 2822638 - 2821835 - | CRISPR-associated protein Cas6 Ctha_2350 2824391 - 2822724 - | carboxyl-terminal protease TERM 3920 2824443 - 2824417 - R 86 -8.1 -4.68593 | opp_overlap 2824423, overlap 2824418 2824423 TTCATTATTTAAAAA GTAAAAGCGTC ACAAG GACGCTTTTAA AGTTTCAGGTAATTA TERM 3921 2824442 - 2824418 - R 85 -11.6 -3.40674 | opp_overlap 2824423, overlap 2824417 2824423 TCATTATTTAAAAAG TAAAAGCGTC ACAAG GACGCTTTTA AAGTTTCAGGTAATT TERM 3922 2824437 - 2824423 - R 81 -7.1 -4.78661 | opp_overlap 2824423, overlap 2824418 2824417 ATTTAAAAAGTAAAA GCGTC ACAAG GACGC TTTTAAAGTTTCAGG TERM 3923 2824423 - 2824437 + r 76 -7.1 -4.24002 | opp_overlap 2824423 2824418 2824417 ATTTAAAAAGTAAAA GCGTC ACAAG GACGC TTTTAAAGTTTCAGG Ctha_2351 2824996 - 2824481 - | Roadblock/LC7 family protein Ctha_2352 2825379 - 2825014 - | Roadblock/LC7 family protein TERM 3924 2825615 - 2825625 + H 79 -4 -5.38348 | opp_overlap 2825615, overlap 2825605 CTTTTTTTTTAGTAA CTAA GAA TTAG TTTTTTGCTGTTTTT Ctha_2353 2825871 - 2828552 + | methyl-accepting chemotaxis sensory transducer TERM 3925 2829463 - 2829434 - g 83 -4.5 -5.27335 | gap 1, overlap 2829442 2829457 CCTGCTAAATAAAAA TTCTGAAATCACTT ATC AAGTGAT-CCAAAA GCTTTCTGAAAATGA Ctha_2354 2828670 - 2829557 + | hypothetical protein TERM 3926 2834462 - 2834449 - g 76 -4.5 -5.03314 | GCGATTGCCAAAAAA GGCCT GTTT AAGCC AAATGAAATTCAGCA Ctha_2355 2829589 - 2836890 + | CheA signal transduction histidine kinase Ctha_2356 2836977 - 2837462 + | CheW protein TERM 3927 2837561 - 2837549 - g 74 -3.3 -5.0538 | opp_overlap 2837557 CGCCATGTCAAAAAA GCAAC TTC GGTGC TCCCCCATTTAAAAA Ctha_2357 2837480 - 2837950 + | CheW protein TERM 3928 2838676 - 2838687 + G 72 -5.8 -4.43477 | opp_overlap 2838676 TAACCATCGTAGATA GCTG GGAA CAGC TTTTAATTGAATCCA Ctha_2358 2837967 - 2839154 + | response regulator receiver protein Ctha_2359 2839219 - 2839578 + | hypothetical protein Ctha_2360 2839600 - 2840301 + | GTPase-like protein TERM 3929 2840327 - 2840360 + T 85 -11.9 -2.60496 | opp_overlap 2840332, overlap 2840332 TTCAGTTAAAAATCA AAAAAGCGAAACACG TTAA TGTGTTTCGCTTTTC GTCTTTAAGACCCCA TERM 3930 2840355 - 2840332 - T 100 -11.1 -5.54079 | opp_overlap 2840327 2840332 TTAAAAATCAAAAAA GCGAAACAC GTTAAT GTGTTTCGC TTTTCGTCTTTAAGA TERM 3931 2840332 - 2840355 + T 100 -11.8 -4.49756 | opp_overlap 2840332, overlap 2840327 TTAAAAATCAAAAAA GCGAAACACG TTAA TGTGTTTCGC TTTTCGTCTTTAAGA Ctha_2361 2841501 - 2840389 - | hypothetical protein TERM 3932 2840574 - 2840585 + g 76 -2.2 -5.28778 | GTGCGTAGTGATTTG TGCG CAGG TGCA TTTTTTCTGCCTCGT TERM 3933 2841600 - 2841627 + H 70 -8.6 -3.18023 | overlap 2841598 TTGTATTATATTCGC TGTGAGTTTTTT CATG AAAAAACACACA TCTTAGTAGTCATAC TERM 3934 2841679 - 2841667 - H 78 -3.3 -5.40004 | overlap 2841668 CATCAAACGAAAAAA CCGCT ATG AGCGC AGTTGGAACATCACT Ctha_2362 2841672 - 2842742 + | Fructose-bisphosphate aldolase TERM 3935 2842784 - 2842816 + F 95 -12.2 -4.08285 | opp_overlap 2842791, overlap 2842791 GGGCAAGATTTTCTA TCAAAAAGGGGCTT GTACA AAGCCCCTTTTTCA TTTCACTTTTTTCTA TERM 3936 2842809 - 2842791 - f 91 -10.3 -4.7254 | opp_overlap 2842784 2842791 ATTTTCTATCAAAAA GGGGCTT GTACA AAGCCCC TTTTTCATTTCACTT TERM 3937 2842791 - 2842809 + F 93 -10.3 -5.01042 | opp_overlap 2842791, overlap 2842784 ATTTTCTATCAAAAA GGGGCTT GTACA AAGCCCC TTTTTCATTTCACTT TERM 3938 2842882 - 2842855 - f 78 -3.5 -5.42259 | gap 1 TCATCCGCAAAAAAA GCTTTGCC-TGA TTACT TCACGCCAAAGC TCTGAACCTCGCTAA TERM 3939 2843251 - 2843261 + G 74 -6.8 -4.27192 | opp_overlap 2843260, overlap 2843260 AGGTGGCCTTACCGA GCTC AAC GAGC TTTTAATCAAGCTTT Ctha_2363 2843078 - 2843515 + | BLUF domain protein TERM 3940 2843518 - 2843493 - T 71 -3.4 -5.08824 | gap 1 TGCTCATCCAAAAAA GACTCAAATCC AGAAA AG-TTTGAGTC AACCAAAAAAGCCCT TERM 3941 2843552 - 2843529 - T 100 -15.4 -5.28481 | opp_overlap 2843529 GAGTCAACCAAAAAA GCCCTGAAGA AAAA TCTTCAGGGC TTCTTGAAAAAAAGA TERM 3942 2843529 - 2843552 + T 100 -15.4 -3.61398 | opp_overlap 2843529 GAGTCAACCAAAAAA GCCCTGAAGA AAAA TCTTCAGGGC TTCTTGAAAAAAAGA Ctha_2364 2845100 - 2843583 - | putative circadian clock protein, KaiC TERM 3943 2844011 - 2844021 + g 72 -8.2 -3.76393 | CTGATAAACTATCCA CCGC AAC GCGG TTTGGCTTAAACTCT TERM 3944 2844243 - 2844256 + g 73 -4.5 -4.74103 | ACCTGCAATAAATTG CGTTG CCAA CAGCG TTTTTCCGTTGCCGG TERM 3945 2844429 - 2844446 + g 74 -5.6 -4.7254 | opp_overlap 2844441 2844442 TTGCTGCGGGTCAAT GGTGAA AGGAAA TTCACC TTTTTGGTGAGAGGT TERM 3946 2844982 - 2844972 - G 78 -5.4 -4.8622 | GCCTTCAACTAAAAA TTGC GCA GCAA ATACCGTTTTGGCAC TERM 3947 2845141 - 2845120 - R 76 -8.9 -3.72893 | TAGTTTTCCATTAAA TTATTCTGA TTTT TCAGAATAA CGATTATTTAGCTTA Ctha_2365 2845422 - 2845120 - | KaiB domain protein Ctha_2366 2846381 - 2845425 - | hypothetical protein Ctha_2367 2848375 - 2846774 - | hypothetical protein TERM 3948 2848340 - 2848350 + g 76 -4 -4.95896 | AAATCCTGTTTTATG TGAA ATA TTCA TTTTTATCAATTTAT Ctha_2368 2851013 - 2848605 - | hypothetical protein TERM 3949 2848868 - 2848884 + g 80 -6.5 -4.84363 | ATGTTCCTTTTATGA GCGCTTT GTC AATGCGC TTTTTAATAATTTCA Ctha_2369 2851718 - 2851122 - | hypothetical protein TERM 3950 2851890 - 2851920 + r 75 -3.4 -5.26875 | opp_overlap 2851890 GAAAAAAGTAAAAAA GCATCAAAGT CTTTTCATGTC GCTTTGATGC TTTTTTACTTGGACG TERM 3951 2851920 - 2851890 - R 80 -2.7 -5.59502 | opp_overlap 2851890 GAAAAAAGTAAAAAA GCATCAAAG TCTTTTCATGTCG CTTTGATGC TTTTTTACTTGGACG Ctha_2370 2852100 - 2851942 - | hypothetical protein Ctha_2371 2853582 - 2852128 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Ctha_2372 2854989 - 2853862 - | PEGA domain protein Ctha_2373 2855165 - 2855833 + | channel protein, hemolysin III family TERM 3952 2855931 - 2855881 - T 70 -8.3 -3.27213 | opp_overlap 2855888, overlap 2855876 2855886 2855887 AGAAATAATATCTAA CACAATTGCCAGAGGCGGAATTT TCCAG AAAATCTGCCTCTGGCTTTTTTG CATCGATTATTTCAA TERM 3953 2855925 - 2855887 - T 76 -10.3 -2.82187 | opp_overlap 2855888, overlap 2855876 2855886 2855881 AATATCTAACACAAT TGCCAGAGGCGGAATTT TCCAG AAAATCTGCCTCTGGCT TTTTTGCATCGATTA TERM 3954 2855888 - 2855924 + T 100 -16.7 -5.10497 | opp_overlap 2855876 2855887 2855886 2855881 ATATCTAACACAATT GCCAGAGGCGGAATTTT CCA GAAAATCTGCCTCTGGC TTTTTTGCATCGATT Ctha_2374 2858529 - 2855938 - | hypothetical protein TERM 3955 2858275 - 2858263 - G 71 -3.4 -4.87626 | TCCTAACACTAAAAA TCCA CCTGC TGGA ACAATCGTAAGACCG Ctha_2375 2859386 - 2858766 - | dephospho-CoA kinase Ctha_2376 2859766 - 2859389 - | hypothetical protein Ctha_2377 2859943 - 2860545 + | Superoxide dismutase TERM 3956 2860589 - 2860571 - T 100 -12.4 -5.30616 | opp_overlap 2860571 GCATTCAAAGAAAAA CGCCGGAA GCT CTCCGGCG TTTTTTGATTGGTGC TERM 3957 2860571 - 2860589 + T 100 -11.7 -5.30155 | opp_overlap 2860571 GCATTCAAAGAAAAA CGCCGGA AGCTC TCCGGCG TTTTTTGATTGGTGC Ctha_2378 2861561 - 2860692 - | hypothetical protein TERM 3958 2861623 - 2861583 - R 80 -10 -3.60475 | gap 1, opp_overlap 2861591, overlap 2861591 AATTTTGAGGTTAAA CCAAAAAACGGGCAAATAT ACTG AT-TTTGCCCGTTTCTTTG TAACCCACCAAAGTG TERM 3959 2861615 - 2861591 - R 100 -8 -5.37593 | gap 1, opp_overlap 2861591, overlap 2861583 GGTTAAACCAAAAAA CGGGCAAATAT ACTG AT-TTTGCCCG TTTCTTTGTAACCCA TERM 3960 2861591 - 2861615 + r 83 -8 -4.55295 | gap 1, opp_overlap 2861583 2861591 GGTTAAACCAAAAAA CGGGCAAATAT ACTG AT-TTTGCCCG TTTCTTTGTAACCCA Ctha_2379 2862193 - 2861651 - | hypothetical protein TERM 3961 2862784 - 2862804 + G 80 -5.5 -5.00884 | overlap 2862771 2862786 TACCAATGCGTATCG TTTGGTTCA TGC TGAATCAGA TTTTTTGCCAGGACT Ctha_2380 2862482 - 2863657 + | Fmu (Sun) domain protein TERM 3962 2863743 - 2863723 - T 100 -9.7 -5.45726 | opp_overlap 2863723 GAGACTTGAAAAAAA TGCCGCG TGTAAGG CGCGGCA TTTTGAAACATGTGA TERM 3963 2863723 - 2863743 + T 85 -10.4 -4.10657 | opp_overlap 2863723 GAGACTTGAAAAAAA TGCCGCGT GTAAG GCGCGGCA TTTTGAAACATGTGA Ctha_2381 2864727 - 2863810 - | L-lactate dehydrogenase Ctha_2382 2865331 - 2864765 - | hypothetical protein TERM 3964 2864825 - 2864801 - G 100 -8.1 -5.15381 | AAGAGATCGAAAAAA TATTCTTTTTA AAA CAAAAAGAATA AAAAATAAAATTACA TERM 3965 2864850 - 2864836 - G 82 -2.8 -5.55001 | GAATAAAAAATAAAA TTACAG CTC CTGAAA AAACAGGAAATAAAA TERM 3966 2866203 - 2866237 + G 71 -3.5 -4.7497 | opp_overlap 2866229, overlap 2866213 TTGATCCATTTAATC GCGGAAGGATTCTTG AGAAA CAAGATTGCATTCGC TTTTTGATGAATGCA Ctha_2383 2865548 - 2866483 + | hypothetical protein Ctha_2384 2867259 - 2866480 - | PASTA domain containing protein TERM 3967 2866755 - 2866742 - G 73 -4.5 -4.74103 | opp_overlap 2866745 2866746, overlap 2866744 2866746 TTTCCAATCGAAAAA GAGAC TGGT GTCCC AGCTTTGAGCAACGC TERM 3968 2867269 - 2867287 + r 75 -4.6 -5.09426 | opp_overlap 2867270, overlap 2867270 TCCCATAAATCAATA ATAAAACC TCA GGTTTTAA TTTTTTCAAATTGCA TERM 3969 2867286 - 2867270 - R 77 -8.1 -3.93401 | opp_overlap 2867269 2867270 CCCATAAATCAATAA TAAAACC TCA GGTTTTA ATTTTTTCAAATTGC TERM 3970 2867270 - 2867286 + r 73 -8.1 -3.64933 | opp_overlap 2867270, overlap 2867269 CCCATAAATCAATAA TAAAACC TCA GGTTTTA ATTTTTTCAAATTGC TERM 3971 2867397 - 2867366 - R 100 -14 -5.35224 | overlap 2867351 TGCAGAAAAATAAAA TGCTTCAGCATTTT GTAG AAAATACTGAAGCA ACCTACTTACATCTT Ctha_2385 2868140 - 2867451 - | two component transcriptional regulator, LytTR family Ctha_2386 2869248 - 2868397 - | transglutaminase domain protein TERM 3972 2868884 - 2868914 + g 86 -11.9 -3.53811 | gap 1, opp_overlap 2868913 ACGGCTTTGCCGAGC CGGTGC-GAGCCCA AAGT TGGGCTCAGCAACG TTTGCAACGGCTCGG Ctha_2387 2870044 - 2869226 - | proteasome-type protease Ctha_2388 2870997 - 2870032 - | protein of unknown function DUF403 Ctha_2389 2872447 - 2871014 - | protein of unknown function DUF404 TERM 3973 2872650 - 2872627 - R 100 -6 -6.06723 | opp_overlap 2872627 TTTTCGAAAAAAAAA GATGCTGC TTTTTTTC GCAGCACC TTTCTTAAAACTGAC Ctha_2390 2873289 - 2872684 - | hypothetical protein Ctha_2391 2874353 - 2873379 - | Polyprenyl synthetase TERM 3974 2874408 - 2874386 - H 80 -7.6 -4.42788 | overlap 2874387 2874388 CTGAAGGTTATAAAA GCCCGCTCGC TGA GCCAGCAAGC AAAGGATTCAAAAAA Ctha_2392 2874617 - 2875216 + | hypothetical protein TERM 3975 2875614 - 2875603 - g 72 -3 -4.93877 | TTCGATCAAATAAAA TCAA AACG TTGA ACATTGCTGGCGCGC Ctha_2393 2875242 - 2875697 + | hypothetical protein Ctha_2394 2876701 - 2875670 - | Radical SAM domain protein TERM 3976 2876295 - 2876305 + g 71 -6.8 -4.07687 | opp_overlap 2876287 AAAATATCGGGTTGC TCGC CCA GCGA TTTTGCAACCGCAAT TERM 3977 2876541 - 2876530 - G 71 -7.2 -4.07568 | GGTCTTTGTGCAAAA GCGG TTCT CCGC CGGTAAAATCGACAA TERM 3978 2877144 - 2877116 - g 79 -2.3 -5.58051 | overlap 2877118 AAAGAAAAAATAAAA TATCCGCCGGTTA TTC TCATCAGCGGAAA TGGCCAAGAACGCTT Ctha_2395 2876867 - 2877478 + | response regulator receiver protein Ctha_2396 2877644 - 2877826 + | hypothetical protein TERM 3979 2877836 - 2877857 + F 100 -9.5 -5.5208 | AAATAAGTTTTTCCT TAAGGCGCA TTTT TGTGCCTTA TTTTTTGTATTCTCA Ctha_2397 2877916 - 2878707 + | zinc/iron permease Ctha_2398 2879484 - 2878723 - | hypothetical protein TERM 3980 2879015 - 2879045 + g 79 -7.6 -4.40358 | opp_overlap 2879018, overlap 2879018 GGCGACTCGATCCAC GAAGGCAAGCTGTT GCT AACCGTTTGCCTTG TTTTATAGAGTAACT TERM 3981 2879018 - 2879042 + g 83 -9.3 -4.32067 | opp_overlap 2879018, overlap 2879015 GACTCGATCCACGAA GGCAAGCTGTT GCT AACCGTTTGCC TTGTTTTATAGAGTA Ctha_2399 2880068 - 2879499 - | hypothetical protein Ctha_2400 2880386 - 2880919 + | hypothetical protein TERM 3982 2880948 - 2880968 + T 100 -11.1 -5.85244 | opp_overlap 2880948 TGCTGATTTTCAAAA GGCTGCTCC TCT GAAGCAGCC TTTTTTATTTTCATT TERM 3983 2880968 - 2880948 - T 100 -13.3 -4.11216 | opp_overlap 2880948 TGCTGATTTTCAAAA GGCTGCTCC TCT GAAGCAGCC TTTTTTATTTTCATT Ctha_2401 2882844 - 2880979 - | thiamine biosynthesis protein ThiC TERM 3984 2882417 - 2882430 + g 76 -4.5 -5.06451 | ACGTATTCCATTTCG GGCGT AACG ATGCC TTTTTTCGCGTAGTG TERM 3985 2884209 - 2884195 - g 74 -5.6 -4.56775 | ATCGGTGTCGAAAAA CGCTTC TCG GATGCG ATGAAAAAAACGGAA TERM 3986 2884898 - 2884882 - g 73 -7.9 -4.09656 | opp_overlap 2884880 GTCAAAATAGAAGAA CTGCTGG CAG CCAGCGG AGTGGATTAATATTA Ctha_2402 2883547 - 2884908 + | PUCC protein TERM 3987 2885071 - 2885081 + F 72 -5.4 -4.56775 | AAATATTTATTTTTT TAGG AGA CCTA TTTTTAGAAAAAAAT Ctha_2403 2885126 - 2885746 + | hypothetical protein TERM 3988 2886389 - 2886379 - T 76 -4 -5.26875 | CGCTTAACTAAAAAA GAAA ATT TTTC ACGCCTTAAAATCAG Ctha_2404 2886828 - 2886388 - | hypothetical protein TERM 3989 2886849 - 2886835 - R 79 -8.6 -4.09551 | AAAGTCCATAAAGAA TCAAGG CTG CCTTGA AATTGCACGATGCTT Ctha_2405 2887360 - 2886941 - | Rieske (2Fe-2S) domain protein TERM 3990 2887008 - 2887018 + g 70 -2.4 -5.08824 | TTAATGTCCGCTTTT GCAG CAC CCGC TTTTTTCAATCCACC Ctha_2406 2888175 - 2887462 - | PHP domain protein TERM 3991 2887502 - 2887530 + g 72 -5.8 -4.40358 | opp_overlap 2887501 2887494 2887502 CTAAAAAGACAAATC GCCACCGAGTGA TTTTT TCTCACGGCGGC TTTTATCGCATCAAT Ctha_2407 2888439 - 2889125 + | phospholipase/Carboxylesterase Ctha_2408 2889836 - 2889120 - | hypothetical protein TERM 3992 2889214 - 2889203 - G 74 -5.8 -4.57569 | CTATGTGCTGAAAAA GGCA AAGC TGCC CACCAAGATTGATGA TERM 3993 2889545 - 2889518 - G 72 -10.6 -2.92613 | opp_overlap 2889515 2889514, overlap 2889515 CGCGAGCCGAAACCA TCCGGTCAACCT GAAA AGATTGACCGGG ACGATTTATAGGGCC Ctha_2409 2891196 - 2889814 - | hypothetical protein TERM 3994 2890230 - 2890217 - G 72 -6.7 -4.27316 | CTCTTTAAGTCAAAA TCAGG TCTC CCTGA TAAGAGTGAATTTTG Ctha_2410 2892527 - 2891193 - | hypothetical protein TERM 3995 2892664 - 2892648 - R 91 -7.3 -5.27335 | GTTGCTAAAGAAAAA CCATCAT GAA ATGACGG GGGAACTACTATGAT TERM 3996 2892983 - 2892963 - R 100 -8.9 -5.52384 | opp_overlap 2892962 2892961, overlap 2892965 TTTTCAGCAAAAAAA TAGGCCGGA AAA CCCGGCCTG AATCATTTCTTATGT TERM 3997 2892981 - 2892965 - R 100 -11.5 -4.40552 | opp_overlap 2892962 2892961, overlap 2892963 TTCAGCAAAAAAATA GGCCGGA AAA CCCGGCC TGAATCATTTCTTAT TERM 3998 2893007 - 2893019 + r 70 -6.3 -4.26903 | CTTATGTTTGGAATT TGATG CTA CATCA TTTTCATACGCTCGA Ctha_2411 2894202 - 2893012 - | FAD dependent oxidoreductase TERM 3999 2893987 - 2893971 - G 78 -6.5 -4.58283 | TAATCGTGTTAAAAA TGCCGCA ATC TTCGGCA ATGCCGAGCAGGTTT TERM 4000 2894540 - 2894552 + r 74 -5.5 -4.74706 | GATTGTTTCCATCAC CGGCA TTT TGCTG TTTTTCCATCTTGAA TERM 4001 2894844 - 2894833 - R 72 -2.2 -5.22039 | overlap 2894835 CGCAAATTGAAAAAA CCTC GCCG GAAG CGCTTCTTCAAAAGC TERM 4002 2895016 - 2894985 - R 95 -12.4 -4.07568 | opp_overlap 2894990, overlap 2894990 TTTTTTCGCGCAAAA CAAAAGCCCTTGCC AAAC AGCAAGGGCTTTTT GCGTCAACTTATTTT TERM 4003 2895011 - 2894990 - R 100 -12.3 -5.07652 | opp_overlap 2894990, overlap 2894985 TCGCGCAAAACAAAA GCCCTTGCC AAAC AGCAAGGGC TTTTTGCGTCAACTT TERM 4004 2894990 - 2895011 + r 100 -11.6 -4.67011 | opp_overlap 2894990 2894985 TCGCGCAAAACAAAA GCCCTTGC CAAACA GCAAGGGC TTTTTGCGTCAACTT Ctha_2413 2896208 - 2895048 - | Radical SAM domain protein Ctha_2414 2896845 - 2896270 - | hypothetical protein Ctha_2415 2898258 - 2896855 - | protein of unknown function DUF214 TERM 4005 2897355 - 2897365 + g 72 -3.2 -4.99638 | CCTGCGCAAGCGTTC CGTC GTT GATG TTTTTGTATAAGTGT TERM 4006 2897418 - 2897391 - G 80 -6.2 -4.74504 | opp_overlap 2897412, overlap 2897412 AGTGTAAGGCAAAAA GCGGCGAACGCA CTTT TACAATCACCGC CGTGATGTCCTCTTT TERM 4007 2898299 - 2898322 + r 85 -7.4 -5.12172 | gap 1, overlap 2898300 TTGTTTGCGCATTTG TGGCCTTGGGC TAC GCTCA-GGCCG TTTTATTTATTGATA TERM 4008 2898300 - 2898321 + r 74 -8.7 -3.65676 | gap 1, overlap 2898299 TGTTTGCGCATTTGT GGCCTTGGGC TAC GCTCA-GGCC GTTTTATTTATTGAT Ctha_2416 2899084 - 2898413 - | ABC transporter-related protein TERM 4009 2898661 - 2898671 + g 73 -4.6 -4.86033 | opp_overlap 2898661 GCTCACCAACAGAAA GCTG CGA CGGC TTTTTATGCAGCTTT TERM 4010 2899087 - 2899118 + r 79 -11 -2.90392 | opp_overlap 2899087, overlap 2899089 TTAAAATGGACATAA CAGGCTAATTTAGT TTTT GCTAAAATAGCCTG TCTGCTTGAAACATG TERM 4011 2899118 - 2899087 - R 81 -10.3 -3.59984 | opp_overlap 2899087 2899089 TTAAAATGGACATAA CAGGCTAATTTAG TTTTTG CTAAAATAGCCTG TCTGCTTGAAACATG Ctha_2417 2899657 - 2899154 - | hypothetical protein TERM 4012 2899335 - 2899321 - G 72 -5 -4.56775 | overlap 2899322 ACGTTCCGTCAAAAA CCTTTC CTT GAAAGA GCGACTGGCCTGATC Ctha_2418 2900521 - 2899721 - | Methyltransferase type 11 Ctha_2419 2900707 - 2902140 + | Deoxyribodipyrimidine photo-lyase TERM 4013 2903963 - 2903940 - g 70 -9.6 -2.98219 | gap 1, overlap 2903939 AATTTGATCACAAAT GCCATCGAGGC CAT GCCTC-ACGGC GGAACATTGCGTGTC TERM 4014 2904307 - 2904289 - g 71 -7.4 -3.99236 | GCCAGAAAAAAGCAA CGGAAATG CTT CATTACCG AAAAAAATCCGAGCT Ctha_2420 2902293 - 2904686 + | signal transduction histidine kinase, nitrogen specific, NtrB TERM 4015 2905128 - 2905155 + G 93 -10.6 -4.58283 | overlap 2905130 CAACACCATTTTGCT TTCCGCAGCAAC GGTC GTTGGTGCGGGA TTTTTCGGCGGATTG TERM 4016 2905130 - 2905153 + G 73 -11 -2.60211 | overlap 2905128 ACACCATTTTGCTTT CCGCAGCAAC GGTC GTTGGTGCGG GATTTTTCGGCGGAT TERM 4017 2905250 - 2905264 + G 86 -4.2 -5.48163 | TGCCGCTCGGCTTGC CGCC GCTCGTA GGCG TTTTTTCGTTTCTTT TERM 4018 2905766 - 2905729 - g 72 -4.7 -4.57073 | opp_overlap 2905736, overlap 2905731 2905745 TATCTGTTTGAAAAA CAGCAGGGCGAGAAATT GCTG ACTTTCGCGCGCCGCGG CGCATCGGCAAAAGT TERM 4019 2905808 - 2905830 + G 80 -6.2 -4.74518 | CCATTACGCCACTTT TTGCCGGCAT TTT AAGCCTGCAA TTTCTTTTCGTGATT TERM 4020 2906459 - 2906470 + G 72 -3 -5.055 | CGGAAAATAAACCCG TTTC AGTT GAAA TTTTTTCCGAGTTGC Ctha_2421 2904934 - 2906610 + | binding-protein-dependent transport systems inner membrane component TERM 4021 2907180 - 2907162 - g 76 -4.4 -5.03314 | opp_overlap 2907166, overlap 2907163 2907166 TTTATGCGGAAAAAA CGCACGCC ATG GGCGTTCT AAACTGGAAAGGTGG Ctha_2422 2906630 - 2907463 + | rod shape-determining protein MreC Ctha_2423 2907578 - 2908060 + | rod shape-determining protein MreD Ctha_2424 2908064 - 2909878 + | penicillin-binding protein 2 TERM 4022 2909946 - 2909974 + G 71 -7.3 -4.1891 | opp_overlap 2909945 2909940 2909942 TTTGGAAGACACCAG CGCCTTGCGCG ACGGCCA CACGCCAGGCG TTTATATTCCCGAAA TERM 4023 2910468 - 2910452 - g 76 -2.3 -5.40072 | overlap 2910458 CTTCCGGGAAAAAAA TGGAA ATCGCGA TTCCA AATTACGACATGCCA TERM 4024 2910707 - 2910697 - g 73 -2.4 -5.15634 | GAGCGCACCAAAAAA GCCG CAA CGCC AAACGAACTTTCCGC Ctha_2425 2909893 - 2911386 + | D-lactate dehydrogenase (cytochrome) TERM 4025 2911847 - 2911835 - f 71 -3.4 -5.05228 | ACCAAAGGAGAAAAA CATG GGCGT CATG ATGCAAGCTTTTTAC TERM 4026 2913234 - 2913256 + G 93 -9.8 -4.57569 | opp_overlap 2913234 CTTGAGCGGCAACGA GCGGCGCT TATTCCT GGCGCCGC TTTTTGCGGCCATGC Ctha_2426 2911836 - 2913284 + | alpha amylase catalytic region Ctha_2427 2913434 - 2914015 + | cyclic nucleotide-binding protein TERM 4027 2914028 - 2914009 - f 90 -9.4 -4.72201 | TTTTAGAAAAAAGAA TTCTTGAC GATC GTCAAGAA AAATGGCTGCTGCTA Ctha_2428 2914031 - 2914981 + | NmrA family protein TERM 4028 2915530 - 2915520 - g 84 -8.2 -4.67048 | opp_overlap 2915521 TGATTGGAAAAGAAA CCGC TCA GCGG CGATTCATTAAATAT Ctha_2429 2915297 - 2915800 + | Domain of unknown function DUF1863 Ctha_2430 2917078 - 2915891 - | 2-alkenal reductase TERM 4029 2916976 - 2916986 + g 74 -6.8 -4.3129 | AATTTGGAGCGACTT CACG ATG CGTG TTTTCATCGTCGCTC Ctha_2431 2917660 - 2917103 - | hypothetical protein Ctha_2432 2917744 - 2918364 + | uracil phosphoribosyltransferase Ctha_2433 2918763 - 2918368 - | VanZ family protein TERM 4030 2918727 - 2918708 - G 100 -9.3 -5.3658 | opp_overlap 2918706 AGGACAAAAATAAAA CCGGCAT AGAGCA ATGCCGG AAATTGATTGAGCCA Ctha_2434 2920168 - 2918774 - | Peptidase M23 TERM 4031 2919475 - 2919486 + g 73 -2.2 -5.1502 | overlap 2919474 TGTTCTTTCTCAAAT TGCT TAGC AGCG TTTCTTTTTCTTTCT TERM 4032 2919805 - 2919815 + g 71 -6.8 -4.08064 | overlap 2919802 CTTTTTCGGCTTCAT GCAG TGC CTGC TTTTGCGCACGAATT TERM 4033 2920238 - 2920217 - R 88 -6.5 -5.22943 | opp_overlap 2920217, overlap 2920229 AGTAAACGTAAAAAA GGTCTAAGG ATAG CCCAAGACC TTTGGCTGAAAATAT Ctha_2435 2921162 - 2920278 - | TonB family protein Ctha_2436 2921429 - 2922718 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 4034 2922863 - 2922880 + G 74 -8.3 -3.84406 | opp_overlap 2922862 2922863 AGGGCGATCCAAAAC CGGTCGC AAAC GCGCCCG TTGTTCTGCTGCCCA Ctha_2437 2922739 - 2923362 + | hypothetical protein TERM 4035 2923424 - 2923373 - f 70 -8.3 -3.2218 | opp_overlap 2923385, overlap 2923377 2923380 2923385 TGTAATATTTAGCAA CCTATAAGAAAATGGAGAGCC-TGA TTTT TCACGGCGCTCCATTTTTCT-TAGG CATTGCGCTCAAACG TERM 4036 2923422 - 2923377 - f 78 -10.8 -2.57423 | gap 2, opp_overlap 2923385, overlap 2923373 2923380 2923385 ATATTTAGCAACCTA TAAGAAAA-TGGAGAGCC-TGA TTTT TCACGGCGCTCCATTTTTCTTA GGCATTGCGCTCAAA TERM 4037 2923418 - 2923380 - f 71 -8.3 -3.43676 | gap 1, opp_overlap 2923385, overlap 2923377 2923373 2923385 TTTAGCAACCTATAA GAAAATGGAGAGCC-TGA TTTT TCACGGCGCTCCATTTTT CTTAGGCATTGCGCT TERM 4038 2923413 - 2923385 - f 87 -8.2 -4.80959 | gap 1, opp_overlap 2923385, overlap 2923380 2923377 2923373 CAACCTATAAGAAAA TGGAGAGCC-TGA TTTT TCACGGCGCTCCA TTTTTCTTAGGCATT TERM 4039 2923385 - 2923413 + F 91 -8.2 -5.08088 | gap 1, opp_overlap 2923385 2923380 2923377 2923373 CAACCTATAAGAAAA TGGAGAGCC-TGA TTTT TCACGGCGCTCCA TTTTTCTTAGGCATT TERM 4040 2923988 - 2923977 - g 88 -5.8 -5.48213 | opp_overlap 2923977, overlap 2923985 CACTGAAAATAAAAA TCGG CAAA CCGA TGTATCGAGCGCGTT TERM 4041 2924266 - 2924254 - g 78 -6.3 -4.72272 | GCCGTTTATCAAAAA GCTTT TGA AAAGC GCTCGCATTACTATA TERM 4042 2924322 - 2924348 + G 79 -7.5 -4.48902 | gap 1, opp_overlap 2924334 CGATTACAACCTATT GCTTACATCAAA TCCA TTTGATG-AAGC TTTATTTGCCTATCT Ctha_2438 2923471 - 2924388 + | protein of unknown function DUF58 Ctha_2439 2924890 - 2924501 - | ferric uptake regulator, Fur family TERM 4043 2925241 - 2925225 - R 74 -10.1 -2.78596 | TAGCGGCCTAGGACA CCGCCCT CTC AAGGCGG AGATCAGGGGTTCGA Ctha_2440 2925707 - 2925564 - | hypothetical protein TERM 4044 2925667 - 2925609 - GR 85 -9.7 -4.19177 | ATTGTTGAAGATAAA CCGAATTCCATCTAAGCTCAACACAGC AATCA GCCATGCCGAGCTTAGATCAAGTTCTG CACATTTATAGCTTC Ctha_2441 2929404 - 2925673 - | Cobaltochelatase TERM 4045 2928022 - 2928054 + gr 74 -8.6 -3.54741 | gap 1, opp_overlap 2928030 AACCATTCCTTCGCC GGGAAAAT-CTTCCC AGTC GCGAAGCATTTTCCC TTTGACCGCATCGTC TERM 4046 2928442 - 2928421 - GR 84 -10.2 -3.97947 | GCGATTGACGAGAAA CCCGATTC GCTCGG GAATCGGG ACGAACTCGCGGAAC TERM 4047 2928449 - 2928461 + gr 70 -6.9 -3.727 | opp_overlap 2928448, overlap 2928450 GGAATCGGGACGAAC TCGCG GAA CGCGG TTTGAATGTCGTAAG Ctha_2442 2930570 - 2929533 - | Magnesium chelatase TERM 4048 2929790 - 2929816 + g 72 -3.1 -5.00616 | gap 1 TGGAAATATTCACCT TCGGATAAAGCG CCAT CGCTTT-TTTGA TTTTTTGAACCAACG TERM 4049 2930425 - 2930450 + g 84 -8.2 -4.56775 | overlap 2930426 ATGTCAGCGAGCGCA CGCACGGCGG TCGACT TCGCCGTGCC TTTTTCGCCGCGAAT TERM 4050 2930426 - 2930449 + g 82 -11.7 -3.33744 | overlap 2930425 TGTCAGCGAGCGCAC GCACGGCGG TCGACT TCGCCGTGC CTTTTTCGCCGCGAA Ctha_2443 2932594 - 2930567 - | Magnesium chelatase TERM 4051 2930833 - 2930855 + g 84 -8.4 -4.57569 | overlap 2930830 TCATGATGGGGCGGG CTGTCGGCTC TTT GAGCAGATAG TTTTTACAAAGCTCG TERM 4052 2930912 - 2930897 - G 73 -7.5 -4.08064 | opp_overlap 2930905 AAGTCCGGCGGAAAA CGGCG TGCGAC CGCCG ACGGGCATGTCTTTC TERM 4053 2931862 - 2931884 + g 78 -5.7 -4.81851 | gap 1, opp_overlap 2931848 2931845, overlap 2931848 2931865 AGCGCAAATGCGGCG GCATTTTCAC TTCG GTGAAAA-GC TTTTTGGCTTTGGCT TERM 4054 2931889 - 2931900 + g 70 -2.2 -5.0133 | CGGTGAAAAGCTTTT TGGC TTTG GCTA TTTTTTGCGCCAGTC TERM 4055 2932060 - 2932072 + g 72 -9.1 -3.65581 | opp_overlap 2932054, overlap 2932057 GATCGAGAAGCTGCG GGCGA AGC TCGCC TTCTTCCGGGTTCAT Ctha_2444 2934337 - 2932601 - | TonB-dependent receptor TERM 4056 2932717 - 2932705 - G 70 -4.7 -4.4773 | CGACATCAATGAAAA GCCGC ACC GCGCC AAGCCGATAGTCAGC TERM 4057 2932884 - 2932874 - G 72 -8.2 -3.74693 | opp_overlap 2932867, overlap 2932875 TGTGATGCGATGAAA CGGC TTG GCCG GAAGCCAATAGCCGG TERM 4058 2933541 - 2933558 + g 76 -7.7 -4.35524 | overlap 2933543 AGCTGATTGTAAAGG TCGCGGT CGGA ATCGCGA TTTTCGGTTTCCGAC Ctha_2445 2938161 - 2934334 - | Cobaltochelatase TERM 4059 2935247 - 2935231 - G 82 -7.9 -4.56597 | overlap 2935232 GGCGTCGCGGAAAAA GCCCGAG ATT CTCGGGA CCACATCCAAACGCG TERM 4060 2935246 - 2935232 - G 79 -11.4 -3.33744 | overlap 2935231 GCGTCGCGGAAAAAG CCCGAG ATT CTCGGG ACCACATCCAAACGC TERM 4061 2936817 - 2936849 + g 78 -5.3 -5.00884 | overlap 2936820 CTCGCTCAGCCATTT TATCCGGCGGCAGCC AGC GGCGGTCGCAGGTCA TTTTTTCCAAAAGCT TERM 4062 2936820 - 2936846 + g 79 -11.4 -3.37655 | overlap 2936817 GCTCAGCCATTTTAT CCGGCGGCAGCC AGC GGCGGTCGCAGG TCATTTTTTCCAAAA TERM 4063 2936869 - 2936883 + g 82 -7.1 -4.79667 | opp_overlap 2936863 2936862 TTCCAAAAGCTCGTG GGCGA GGTCG TCGCC TTTTTCATAGGTTTT TERM 4064 2936965 - 2937001 + g 100 -16 -3.40403 | gap 2 TTGAAAACTGTCCAG CCCGACCGCGCAGCCGAT TCT ATCG-TTGCGCGG-CGGG TTGTGGTGAAAGACA TERM 4065 2937047 - 2937063 + g 72 -3 -5.00616 | gap 1, overlap 2937047 2937048 TCCGAATTGGGTTTA T-GGCGA AGCA TCGCCCA TTTTTTAGCCAGCGA TERM 4066 2937487 - 2937504 + g 78 -5.5 -4.81249 | AATGTGAAATATCGG CAATGCG TTTG CGCCTTG TTTTTCAATTTCCCG Ctha_2446 2939209 - 2938148 - | Radical SAM domain protein TERM 4067 2938395 - 2938383 - G 72 -4.8 -4.65895 | opp_overlap 2938383 GTGCCGAGCGAAAAA TCGG GATCG CCGA ATGTTTGCGTGCATG Ctha_2447 2940539 - 2939349 - | periplasmic binding protein TERM 4068 2940723 - 2940706 - R 70 -4.8 -4.65916 | overlap 2940707 2940719 GCTACCTGAACAAAA CGCGCT CAGGAT AGCGCA AAATGGCGCGGCGAT Ctha_2448 2943141 - 2940784 - | TonB-dependent receptor plug Ctha_2449 2944627 - 2943521 - | ABC transporter-related protein TERM 4069 2943819 - 2943809 - G 70 -2.4 -5.06414 | GCGGTCGAATAAAAA TCCG TCG CGGG CAAAAGCTTTTTCAA Ctha_2450 2945775 - 2944624 - | transport system permease protein TERM 4070 2944693 - 2944705 + g 74 -10.5 -3.14344 | opp_overlap 2944674 2944692 2944693 TGGCGAACCGACAAG CGCCG TGA CGGCG TTAATCGGCAAGGTG TERM 4071 2944705 - 2944693 - G 71 -10.5 -2.64912 | opp_overlap 2944693, overlap 2944674 2944692 TGGCGAACCGACAAG CGCCG TGA CGGCG TTAATCGGCAAGGTG TERM 4072 2945271 - 2945244 - G 71 -9.8 -3.25111 | overlap 2945242 CCAAAATCACCAAGA GCACCAACGCCG AACC CAGCGTTGAAGC CAGCACAATCAACCA Ctha_2451 2947042 - 2945792 - | periplasmic binding protein TERM 4073 2947008 - 2946968 - G 74 -7 -4.29325 | gap 1, opp_overlap 2947003 2947005 2947006, overlap 2946972 GAGCAATATGGAAAA TAAAGCACGCGACTTACGT AATA ACG-AAACCGCAGGCTTTA CTCCACGTAGTGGAA TERM 4074 2947003 - 2947028 + g 78 -5.5 -4.80736 | gap 1, opp_overlap 2946972 2946968, overlap 2947005 2947006 ATAACGAAACCGCAG GCTTTACTCCAC GTA GTGGAATAA-GC TTTCTTTCTTTCATG TERM 4075 2947417 - 2947390 - R 93 -11.4 -4.30978 | opp_overlap 2947390, overlap 2947371 2947368 TTCAATGGAGGAAAA GCCGCTTTAAAG TACC CCTTAAAGCGAC TTTCGGGAAATCCTT Ctha_2452 2948891 - 2947431 - | argininosuccinate lyase TERM 4076 2949072 - 2949036 - R 100 -18.2 -5.48213 | gap 1, opp_overlap 2949036 TATCGAAAACAAAAA GCCGCCGTTTCGCACCA AGCA TAGTG-GAAACGGCGGC TTTTTCATTCAATAA TERM 4077 2949036 - 2949072 + r 100 -16 -4.88407 | gap 1, opp_overlap 2949036 TATCGAAAACAAAAA GCCGCCGTTTCGCACCA AGCA TAGTG-GAAACGGCGGC TTTTTCATTCAATAA Ctha_2453 2951382 - 2949115 - | aconitate hydratase TERM 4078 2949464 - 2949424 - G 77 -11.3 -3.16921 | gap 3, opp_overlap 2949425 2949444 2949445 2949447, overlap 2949414 2949405 ACGAACGCCGAGGAA GCGA-GGCTCCATCGCCGCG TGTT CGCG-CGA-AGAGCCTTCGC CGTAGTTTTCATCAC TERM 4079 2951688 - 2951678 - R 88 -6.8 -5.31275 | opp_overlap 2951678 CTTGATTATAAAAAA CGGT TAT ACCG TTTGAAATTTAGTCG TERM 4080 2951737 - 2951718 - R 95 -12.2 -4.27316 | opp_overlap 2951718 GCCGTTAACGCAAAA CGCATTCC CAGT GGAATGCG TTTTGATAGGCAAAT TERM 4081 2951718 - 2951737 + r 95 -12.2 -4.25283 | opp_overlap 2951718 GCCGTTAACGCAAAA CGCATTCC CAGT GGAATGCG TTTTGATAGGCAAAT Ctha_2454 2953729 - 2951759 - | methyl-accepting chemotaxis sensory transducer TERM 4082 2951859 - 2951869 + g 72 -5.4 -4.38748 | GTTAACTGCGCAATT TCCT GAG AGGA TTCTTTGTTTCTAAG Ctha_2455 2955633 - 2953816 - | hypothetical protein Ctha_2456 2956339 - 2955686 - | CheW protein Ctha_2457 2956767 - 2956405 - | response regulator receiver protein TERM 4083 2956546 - 2956559 + g 79 -2.3 -5.49809 | GATCACAGGAATGTT TGCAG TTTC CGGCA TTTTTTTCAGATTTC Ctha_2458 2957942 - 2956842 - | response regulator receiver protein TERM 4084 2958001 - 2957988 - R 71 -9.5 -2.61383 | opp_overlap 2957987 2957988 2957989, overlap 2957987 AGGTTTAGCGATAAT CGCGC GCAT GCGCG TCGCTATTTTCAAAA TERM 4085 2958138 - 2958120 - R 100 -13.2 -5.1925 | opp_overlap 2958120 GTATAACCCAAAAAA GGAGATGC CCA GCATCTCC TTTTTCTTGATAACT TERM 4086 2958120 - 2958138 + r 100 -13.2 -5.14163 | opp_overlap 2958120 GTATAACCCAAAAAA GGAGATGC CCA GCATCTCC TTTTTCTTGATAACT Ctha_2459 2958365 - 2958171 - | hypothetical protein Ctha_2460 2959683 - 2958826 - | beta-lactamase domain protein TERM 4087 2958939 - 2958953 + g 75 -2.8 -5.18371 | AATCTTCACGAATAG CTTGGT CTA ACAAAG TTTTCTTTTCTGCCA TERM 4088 2959712 - 2959699 - R 100 -9.5 -6.09196 | opp_overlap 2959699 TTCAAAATAAAAAAA GCCCG ATAA CGGGC TTTAATATAAAAGGT TERM 4089 2959699 - 2959712 + r 79 -9.5 -3.83205 | opp_overlap 2959699 TTCAAAATAAAAAAA GCCCG ATAA CGGGC TTTAATATAAAAGGT Ctha_2461 2960115 - 2959750 - | ribosomal protein L19 Ctha_2462 2960831 - 2960145 - | tRNA (guanine-N1)-methyltransferase TERM 4090 2960441 - 2960431 - G 77 -6.8 -4.50976 | opp_overlap 2960430 CCCGACAGCACAAAA TCGC CGA GCGA AATCTCTTTTGTTAT Ctha_2463 2961374 - 2960868 - | 16S rRNA processing protein RimM TERM 4091 2961236 - 2961248 + g 76 -9.1 -3.6993 | overlap 2961235 2961233 GAACCTGCACTTTAT GAGCG TCT CGCTC TGTTTTGCCTAAATA TERM 4092 2961444 - 2961411 - R 100 -17.7 -3.37612 | opp_overlap 2961418 2961437, overlap 2961418 GCTAAGTTCAACCAA TGAGAAAGGGCTTTT AATA AAAAGCCCTTTCCCA ACGAAAGTATTTTAC TERM 4093 2961437 - 2961418 - R 86 -10.8 -4.10331 | opp_overlap 2961418, overlap 2961411 TCAACCAATGAGAAA GGGCTTTT AATA AAAAGCCC TTTCCCAACGAAAGT TERM 4094 2961418 - 2961437 + r 83 -10.8 -3.53091 | opp_overlap 2961418 2961411 TCAACCAATGAGAAA GGGCTTTT AATA AAAAGCCC TTTCCCAACGAAAGT Ctha_2464 2961881 - 2961474 - | ribosomal protein S16 TERM 4095 2961804 - 2961789 - G 72 -6.1 -4.21989 | opp_overlap 2961785 GAGAACTTCAAGAAA GCGTC CGTCAC GACGC GCTCTTGCGTCCGCT Ctha_2465 2963275 - 2961926 - | signal recognition particle protein TERM 4096 2962812 - 2962801 - G 79 -2.2 -5.47159 | CTTCAATAGAAAAAA CAGG AACA CCTA TTTGCGCCCCAAGTG TERM 4097 2963433 - 2963457 + r 95 -12.9 -3.71649 | opp_overlap 2963427 TTGAACAAATTCCTA TCGCTCCCCTT AAA AAGGAGAGCGA TTTAGCATTTACAAC Ctha_2466 2963758 - 2963534 - | hypothetical protein TERM 4098 2963889 - 2963875 - H 81 -4.2 -5.41143 | TATTTTCTAAAAAAA TTGCGG GGA CCGAAA ATTAAACTTGAGTTA Ctha_2467 2964045 - 2965550 + | peptidase M16 domain protein TERM 4099 2965575 - 2965589 + G 76 -4.2 -5.00616 | overlap 2965572 2965571 2965573 2965575 TGTTTATCCTGACGC TCGTCG GGG CGGTGA TTTTTTGCCCCGCAC TERM 4100 2965654 - 2965642 - g 74 -10.5 -3.18912 | opp_overlap 2965641 2965640 2965644 2965646 CGATCGAGTGATGAA GCCCG AAT CGGGC GATTTGCCCGAAGCC Ctha_2468 2965547 - 2966995 + | peptidase M16 domain protein TERM 4101 2967038 - 2967020 - f 74 -9 -3.61983 | CGAATTGACAGAGAA TTTTTCCA AAA TGGAAAAA ATAAGTCGAGGAATG TERM 4102 2967610 - 2967645 + G 82 -11.8 -3.41878 | gap 1, opp_overlap 2967620, overlap 2967609 CATCGGAACTTTCGG GCG-GCGAACAGCAGCG CGT CGCCGTTGCTCGCTCGC TTATCAATTCACCGA Ctha_2469 2967159 - 2967860 + | ABC transporter-related protein TERM 4103 2968127 - 2968117 - g 75 -3.2 -5.26119 | TTCTGAAAAAGAAAA CTAC ACA GCAG GAATTGCCCATTCGC TERM 4104 2969238 - 2969227 - g 73 -4.4 -4.82901 | overlap 2969237 GGCGGCTGATAAAAA GCTT TACG AAGC CAAAAATAGCGGCAG Ctha_2470 2967959 - 2969272 + | diguanylate cyclase TERM 4105 2969339 - 2969310 - T 71 -3.1 -5.09245 | GCAAAACGAGAAAAA TTTCAATAAAAAA TTTG TTTTTTATCTAAA AACCTCGTATAATTA TERM 4106 2969470 - 2969489 + T 100 -12.2 -5.69262 | opp_overlap 2969470 CCACCACAAGTCAAA CGCATCTC AAAA GAGATGCG TTTTTGTTTTTATAC TERM 4107 2969489 - 2969470 - T 90 -12.2 -3.82083 | opp_overlap 2969470 CCACCACAAGTCAAA CGCATCTC AAAA GAGATGCG TTTTTGTTTTTATAC Ctha_2471 2970316 - 2969540 - | GCN5-related N-acetyltransferase TERM 4108 2970314 - 2970328 + g 72 -5 -4.6951 | GATTTTTATATCATT CATGGT GGA ATCATG TTTATTTTAACTGCT TERM 4109 2970472 - 2970485 + r 75 -3.1 -5.24003 | CCAAACACTTTTTAA TTGAC ATGA GTCGA TTTTTCCTTTTTGTT Ctha_2472 2970656 - 2970468 - | hypothetical protein TERM 4110 2970785 - 2970796 + r 77 -5.8 -4.72272 | TCCATTGATGGTTAA GCAG CGCT CTGC TTTTTGGTGGCAAAC Ctha_2473 2972069 - 2970999 - | bifunctional phosphoglucose/phosphomannose isomerase TERM 4111 2971637 - 2971656 + g 70 -5.1 -4.42047 | GTGGAAAACCGCCAG GCAATTT TACCAC AAATTGC TTATTCTTTTTTGCT TERM 4112 2972005 - 2972029 + g 83 -10.8 -3.69094 | opp_overlap 2972004 TACAGGTTCAAAATT TTGGCTCGCA TGTCT TGCGAGTCAA TTTGACTGATCAATT Ctha_2474 2972823 - 2972086 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 4113 2972363 - 2972350 - G 78 -6.7 -4.56597 | opp_overlap 2972339 GGTCTCGCCGAAAAA GCGAT TGTC ATCGC CATCGATATACTTAA TERM 4114 2972878 - 2972855 - R 75 -4.6 -5.03314 | gap 1, overlap 2972859 2972861 TTGATTGCTAAAAAA TCAAC-ATGGC ATC GCCATAGCCGA GAAACTTGTAATCGC Ctha_2475 2973887 - 2972847 - | S-adenosylmethionine/tRNA-ribosyltransferase-isomerase TERM 4115 2972959 - 2972929 - G 81 -4.7 -5.14563 | overlap 2972911 2972932 TTTTTCATCAAAAAA TCATGCTCGGCAA ACGCG CTGACGAGCATTA GCAAGGTCGATTCCG Ctha_2476 2975014 - 2974130 - | Tetratricopeptide TPR_2 repeat protein TERM 4116 2974437 - 2974447 + g 73 -2.4 -5.252 | opp_overlap 2974432 GCCGCAATCATCGCA TCCG CAA CGGC TTTTTTATGCAAATA TERM 4117 2974754 - 2974738 - G 74 -3.7 -5.06414 | CTTTTTCAACAAAAA TTTTAGC TTC GCTCAAA CGACCAAGTTCAGCA Ctha_2477 2975707 - 2975027 - | dTMP kinase TERM 4118 2975823 - 2975833 + r 75 -2.4 -5.40072 | opp_overlap 2975824 TGCTTCGGACAAATT ACGC GCG GCGC TTTTTTTCCGCCAGC Ctha_2478 2976915 - 2975821 - | glycosyl transferase group 1 Ctha_2479 2977997 - 2976924 - | glycosyl transferase group 1 Ctha_2480 2978991 - 2977999 - | glycosyl transferase family 9 TERM 4119 2979625 - 2979637 + G 82 -7.7 -4.57569 | opp_overlap 2979625 AAGACGGCCAAAAAA CTTCG CGA CGAAG TTTTTAAGAAAATCA TERM 4120 2979637 - 2979625 - g 88 -7.7 -5.04987 | opp_overlap 2979625 AAGACGGCCAAAAAA CTTCG CGA CGAAG TTTTTAAGAAAATCA Ctha_2481 2979196 - 2981121 + | ABC transporter-related protein TERM 4121 2981144 - 2981156 + G 72 -10.5 -2.91924 | overlap 2981143 AACACGTTCTTATTA CCGGC GGC GCCGG ATTTATCGGAAGTCA TERM 4122 2981485 - 2981472 - g 78 -6.7 -4.57569 | opp_overlap 2981471 GGAGTTGGCTAAAAA GCTTG GCGT CAAGC AATTTGTGTTCGCAT Ctha_2482 2981125 - 2982081 + | NAD-dependent epimerase/dehydratase Ctha_2483 2982235 - 2983161 + | hypothetical protein TERM 4123 2983445 - 2983459 + G 81 -3.5 -5.31275 | CTCTCCGATATCGCC GGCCA AATGA TGGTC TTTTTTGTCATGACC TERM 4124 2983554 - 2983539 - g 78 -5.4 -4.78326 | overlap 2983540 TTCGAAATAAACAAA CCGTCA ATAT TGACGA GATAAATCTCTTGAA Ctha_2484 2983271 - 2983576 + | NADH-ubiquinone oxidoreductase chain 4L TERM 4125 2983830 - 2983852 + G 71 -3.4 -4.8083 | gap 1, overlap 2983802 TCGTCGGCGGCTTTT CGGCGACCG TCATTT TGGT-GCCG TTTTTCATCCTGTTA Ctha_2485 2983703 - 2985634 + | proton-translocating NADH-quinone oxidoreductase, chain L TERM 4126 2986614 - 2986602 - g 74 -5.5 -4.62336 | overlap 2986603 AGCTTACTCGAAAAA CGGCA TTG TGCCA AAGTTCGCTTGTGAA TERM 4127 2988867 - 2988882 + G 73 -2.4 -5.1848 | overlap 2988869 TTTTATTCCGATGCA CACGCT CAAT GGCGAG TTTTTTGGATTCATT TERM 4128 2989626 - 2989640 + G 80 -7.2 -4.59773 | TATCAATCGCTTGGT TCAAGA AAT TCTTGA TTTTTCAAAGTACGA Ctha_2486 2985661 - 2990139 + | PAS/PAC sensor signal transduction histidine kinase Ctha_2487 2991319 - 2990216 - | Methicillin resistance protein TERM 4129 2990770 - 2990786 + g 84 -8 -4.74132 | TGTATCTCATATTGT GGAGCA GTTCA TGCTCC TTTTTGGTGAGGTCT TERM 4130 2991446 - 2991431 - H 77 -6.8 -4.59511 | AATATTGGCGAAAAA GACGCT TTTC AGCGCC AAATCATTGAAATAA TERM 4131 2992984 - 2993026 + G 70 -2.1 -4.95155 | gap 1, overlap 2992987 2992990 2993005 AATCGCACGTTAGTT GATTTGTCAGGGC-GAGA AATTGCGG TCTCTGCCTTGATGATTC TTTTTATCGTCTGGA Ctha_2488 2991616 - 2993157 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 4132 2993219 - 2993233 + G 70 -5 -4.41494 | TGACGGCTTCGGGTA TCAGCA TTT TGTTGA TTTTAGTTGAGGCTG TERM 4133 2994255 - 2994266 + G 82 -5.8 -5.14965 | TTTTTTTTCACGCGC GCCA CTTT TGGC TTTTTTGATGGCCAT TERM 4134 2994380 - 2994406 + G 76 -8.7 -4.15632 | gap 1, overlap 2994391 ACATGACCTGGCTTG CTGTGGCTGGCG TAAT CGCCAGC-GCGG TTTCTGTCTCCTACT Ctha_2489 2993170 - 2994597 + | proton-translocating NADH-quinone oxidoreductase, chain N TERM 4135 2994649 - 2994615 - f 100 -11.6 -4.65895 | opp_overlap 2994614 2994618, overlap 2994619 2994620 CGCCCTATCTAAAAA TCAACCGAGCAGTTTT TCA AAAACTGCTCGCCTAA CTTACTCTCACCTTG TERM 4136 2994645 - 2994619 - f 90 -12.4 -3.83042 | opp_overlap 2994618 2994614, overlap 2994615 2994620 CTATCTAAAAATCAA CCGAGCAGTTTT TCA AAAACTGCTCGC CTAACTTACTCTCAC TERM 4137 2994644 - 2994620 - f 100 -15.9 -2.89102 | opp_overlap 2994618 2994614, overlap 2994619 2994615 TATCTAAAAATCAAC CGAGCAGTTTT TCA AAAACTGCTCG CCTAACTTACTCTCA TERM 4138 2994778 - 2994763 - f 70 -7.6 -3.5774 | ACGTAACTTTTTAAA GTCTGA TTTT TCAGAC AAAAACGCAGAATCT TERM 4139 2995122 - 2995097 - g 72 -6.2 -4.24204 | GATTGACATTCAAAA TGCGCAAAAC GATATG GTTTTGCTCA ATCAAATTCTGGACA TERM 4140 2995223 - 2995210 - g 72 -3.1 -5.00616 | CTGCTGTCCAAAAAA CGAAA GATA TTCCG GTTTGCATGATGGTT TERM 4141 2995660 - 2995678 + G 76 -5.2 -4.87665 | overlap 2995655 TAAAGCGAGGGGCGT TCATTGCC TTT GGCGCTGA TTTTTATGAATGGGG Ctha_2490 2994882 - 2995844 + | protein of unknown function DUF534 Ctha_2491 2995916 - 2996908 + | WD-40 repeat protein TERM 4142 2996936 - 2996968 + F 93 -4.8 -5.7946 | opp_overlap 2996936 CCCTTTATTCACAAA GTGATTCCGCTGCG ACCTG CAAAACGGAATCAC TTTTTTTATTGAACA TERM 4143 2996968 - 2996936 - f 81 -9.2 -3.91897 | opp_overlap 2996936 CCCTTTATTCACAAA GTGATTCCGCTGCG ACCTG CAAAACGGAATCAC TTTTTTTATTGAACA TERM 4144 2996992 - 2997008 + F 73 -6.5 -4.21471 | overlap 2996994 TTGAACAACGGTTTT CTGCCAA TTA TTGGCTG TTATTATTTTGAAGT TERM 4145 2996994 - 2997006 + F 70 -7.7 -3.69534 | overlap 2996992 GAACAACGGTTTTCT GCCAA TTA TTGGC TGTTATTATTTTGAA TERM 4146 2997241 - 2997255 + G 72 -2.7 -5.05782 | GCACTGAGCGATATT GGCGC GTTCG GCGGC TTTTTTGAACTAGAT TERM 4147 2997983 - 2997967 - g 82 -7.9 -4.69664 | overlap 2997969 GAGATGATTCAAAAA GACGGCA ATG TGCCGAC CGAAGACATGCGCCG TERM 4148 2997981 - 2997969 - g 77 -9.1 -3.95883 | overlap 2997967 GATGATTCAAAAAGA CGGCA ATG TGCCG ACCGAAGACATGCGC Ctha_2492 2997133 - 2998122 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 4149 2998296 - 2998278 - g 77 -10.4 -3.31905 | opp_overlap 2998278, overlap 2998276 ACCCGCCATATAATA TCGGAAAA AAG TTTTCCGA TTTCCACGACAAGTG TERM 4150 2998278 - 2998296 + G 79 -10.4 -3.53224 | opp_overlap 2998278 2998276 ACCCGCCATATAATA TCGGAAAA AAG TTTTCCGA TTTCCACGACAAGTG TERM 4151 2998515 - 2998535 + G 91 -11.2 -4.28774 | opp_overlap 2998514 2998513 AAGCTAAAAAATATT TCGGCTCA ATGTA TGAGCCGA TTTTGCATTGCGTGA Ctha_2493 2998160 - 2999038 + | Site-specific DNA-methyltransferase (adenine-specific) Ctha_2494 2999058 - 3000197 + | hypothetical protein TERM 4152 3000402 - 3000372 - g 73 -11.1 -2.66695 | opp_overlap 3000373, overlap 3000357 3000348 3000371 3000369 CGCGCCATGAAACAG TCGCGTGCGGC ACGGAAGAA GCCGCACGCGT TTTGGAAAAATGTGG TERM 4153 3000373 - 3000401 + G 100 -14.6 -4.09243 | opp_overlap 3000357 3000348 3000372 3000371 3000369 GCGCCATGAAACAGT CGCGTGCGGC ACGGAAGAA GCCGCACGCG TTTTGGAAAAATGTG Ctha_2495 3000236 - 3001096 + | modD protein TERM 4154 3001138 - 3001119 - f 83 -10.7 -3.75629 | opp_overlap 3001119 CATTCCTAATGCAAA GAGCCGC GCGGAA GCGGCTC TTATAACGTCCCCAT TERM 4155 3001119 - 3001138 + F 79 -10.7 -3.32963 | opp_overlap 3001119 CATTCCTAATGCAAA GAGCCGC GCGGAA GCGGCTC TTATAACGTCCCCAT Ctha_2496 3001383 - 3002963 + | hypothetical protein Ctha_2497 3003046 - 3003936 + | hypothetical protein Ctha_2498 3005152 - 3003941 - | hypothetical protein TERM 4156 3004883 - 3004871 - G 86 -9.1 -4.45168 | CGCTGAAAACACAAA TCCCG ACA CGGGA AAAGCAATTCCTGTA Ctha_2499 3006132 - 3005239 - | signal peptidase I TERM 4157 3006013 - 3006034 + g 79 -2.2 -5.55769 | overlap 3006014 TGCAAAAATCAGCGC TTCTGCCC ATTCAC GAGCAGAG TTTTTTGTTGTCGCC Ctha_2500 3008048 - 3006228 - | GTP-binding protein LepA Ctha_2501 3008649 - 3008209 - | hypothetical protein TERM 4158 3008418 - 3008434 + g 70 -2.3 -4.9725 | CGCCGTTCTCAAACG TATTCAG CCG CTTAATA TTTTTCTGTGCAACT TERM 4159 3008524 - 3008508 - G 82 -3 -5.51353 | gap 1, overlap 3008510 CAAAAACAATAAAAA GA-GACG CTTC CGTCATC TCAATGGGCTGCAAC TERM 4160 3008701 - 3008671 - R 100 -12 -5.46629 | opp_overlap 3008670 3008669 3008673 AAGACTCTAAAAAAA TATCGCTCGCAA AAAAGAG CTGCGAGCGATA GGTTTGTGTTATGAG TERM 4161 3008673 - 3008699 + r 72 -9.5 -2.77298 | opp_overlap 3008671, overlap 3008670 3008669 GACTCTAAAAAAATA TCGCTCGCA AAAAAGAGC TGCGAGCGA TAGGTTTGTGTTATG Ctha_2502 3009455 - 3009009 - | transcriptional regulator, MarR family TERM 4162 3009555 - 3009537 - H 91 -7.4 -5.26875 | opp_overlap 3009537 GTTCGAAGCAAAAAA GCCGAGTT GTG AATTCGGC TTTCTCATTGTACAC TERM 4163 3009537 - 3009555 + H 82 -9.6 -4.1021 | opp_overlap 3009537 GTTCGAAGCAAAAAA GCCGAGTT GTG AATTCGGC TTTCTCATTGTACAC TERM 4164 3010070 - 3010054 - g 72 -5.1 -4.57073 | opp_overlap 3010045 GATGCTGCTGAAAAA GGAAGCT TTC AGCTTAC CTCCAAAATCACAAA Ctha_2503 3009811 - 3010917 + | hypothetical protein Ctha_2504 3011080 - 3012660 + | magnesium chelatase, subunit ChlI family Ctha_2505 3012897 - 3013901 + | oxidoreductase domain protein Ctha_2506 3013934 - 3014260 + | Hpt protein Ctha_2507 3014740 - 3014276 - | UspA domain protein Ctha_2508 3015193 - 3014873 - | thioredoxin Ctha_2509 3015629 - 3015213 - | OsmC family protein TERM 4165 3015426 - 3015440 + g 83 -4.3 -5.27477 | TTCAATGTTCAACTT CGTAA TGGTT TTACG TTTTTTGGTTAAAAT Ctha_2510 3016300 - 3015665 - | conserved hypothetical protein; putative signal peptide TERM 4166 3015739 - 3015757 + g 75 -6.1 -4.49041 | CTTTATATCCTACGG CTTTATC GTTAG GATAAAG TTCTTTTACTTTTTT TERM 4167 3015952 - 3015968 + g 73 -4.4 -4.87052 | gap 1, overlap 3015964 TAATGATTTCCTCTT CCTGCGC AGTT GC-CAGG TTTTCTTGGTTTCTG Ctha_2511 3017344 - 3016502 - | glycosyl transferase family 2 TERM 4168 3017226 - 3017242 + g 73 -4.4 -4.7497 | opp_overlap 3017226 CCGTCCATAATAAGA TGTTCG GCAAA CGGACA TTTTTGCTCAATCAC Ctha_2512 3018291 - 3017395 - | glycosyl transferase family 2 Ctha_2513 3018811 - 3018482 - | glycosyltransferase involved in cell wall biogenesis TERM 4169 3018549 - 3018537 - G 75 -2.7 -5.1615 | TCAACATTTAAAAAA GAAAT AAT ATCTC CTTTCGCCATTTTGA Ctha_2514 3020074 - 3018812 - | glycosyl transferase group 1 Ctha_2515 3021795 - 3020086 - | methyltransferase FkbM family TERM 4170 3021234 - 3021268 + g 79 -10.3 -3.51924 | opp_overlap 3021233 3021238 3021264, overlap 3021238 AACCGCCTTCAATAT TAAACTTATAAAGCA AGTCA TGCTCTATAAGTTTA TTATATAAATAAACA TERM 4171 3021238 - 3021264 + g 75 -6.7 -4.39998 | opp_overlap 3021238 3021233, overlap 3021234 GCCTTCAATATTAAA CTTATAAAGCA AGTCA TGCTCTATAAG TTTATTATATAAATA TERM 4172 3021264 - 3021238 - G 77 -8.9 -3.92324 | opp_overlap 3021234 3021238, overlap 3021233 GCCTTCAATATTAAA CTTATAAAGCA AGTCA TGCTCTATAAG TTTATTATATAAATA Ctha_2516 3022454 - 3021792 - | hypothetical protein TERM 4173 3022301 - 3022316 + g 70 -4.8 -4.4831 | opp_overlap 3022301 TGGGGCCCGAACCTA TTTCTA AATT TAGAAA TTCTTTTTGCTGAAT TERM 4174 3022348 - 3022363 + g 72 -6.2 -4.21936 | opp_overlap 3022353 AGTTTCTGAATCTTA TCCAAT GAAG ATTGGA TTTTCAAATTCTCCG TERM 4175 3022385 - 3022395 + g 73 -4 -4.90013 | overlap 3022391 AATTCTCCGTTTTTT TTAC CTT GTAA TTTTTAATTCCATTC Ctha_2517 3023286 - 3022447 - | methyltransferase FkbM family TERM 4176 3023092 - 3023102 + g 72 -2.6 -5.08824 | TTCTGAAACAATATT TTTT TTT AAAA TTTTTTCAATAAGAA Ctha_2518 3024512 - 3023271 - | ABC transporter-related protein TERM 4177 3023484 - 3023470 - G 80 -5.8 -5.00616 | CTTGGCTTTAAAAAA TTTTGA ATA TCAAAA ACATATTCATGAACA Ctha_2519 3024728 - 3024534 - | hypothetical protein TERM 4178 3024667 - 3024685 + g 71 -3.8 -4.82901 | overlap 3024669 TTGGCATCATATTCA TGCGCTAT ACT ATTGCGTA TTTTTCTCAAACAAA Ctha_2520 3026072 - 3025245 - | ABC-2 type transporter Ctha_2521 3027563 - 3026094 - | hypothetical protein Ctha_2522 3029972 - 3027576 - | capsular exopolysaccharide family TERM 4179 3028804 - 3028814 + g 73 -4 -4.87807 | AGCTTCTTATATGCC TCAA ATT TTGA TTTTTGCTCTATTAA Ctha_2523 3031129 - 3030053 - | hypothetical protein TERM 4180 3030379 - 3030363 - G 76 -8 -4.2558 | overlap 3030376 TAGTGCTTATCAAAA CCCATG GCAAA CATGGG CAATAATGTACCCAA Ctha_2524 3032163 - 3031135 - | glycosyl transferase family 2 TERM 4181 3031801 - 3031817 + g 79 -4.4 -5.2112 | overlap 3031803 GATGGATAAAATTTT TGGCTG AAGTG CAGCTA TTTTTTCATGCTGTT Ctha_2525 3033044 - 3032217 - | tryptophan synthase, alpha subunit Ctha_2526 3033949 - 3033095 - | UbiA prenyltransferase Ctha_2527 3034920 - 3034036 - | exopolyphosphatase-related protein Ctha_2528 3035940 - 3034924 - | response regulator receiver modulated metal dependent phosphohydrolase TERM 4182 3035353 - 3035337 - G 74 -7.3 -4.2558 | opp_overlap 3035337 3035336 3035339 CAGGCTTGAGCAAAA TAGCGTC AGG AACGCTA ATTTTACCAATGTCA Ctha_2529 3037028 - 3036003 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 4183 3036290 - 3036310 + g 84 -7.5 -4.91084 | AAATCGCATCGACCT CCAACGTGG TTT CTTCGTTGG TTTTATTATTAAATA TERM 4184 3037143 - 3037164 + r 83 -10.2 -3.99805 | opp_overlap 3037143, overlap 3037137 AATTTAAAGCAAAAA GGCATTCC CCAAGA GGAATGCC TTTAACTTTTTCAAA TERM 4185 3037164 - 3037143 - R 93 -10.9 -5.01042 | opp_overlap 3037143 3037137 AATTTAAAGCAAAAA GGCATTCCC CAAG AGGAATGCC TTTAACTTTTTCAAA TERM 4186 3037195 - 3037183 - R 79 -6.3 -5.01732 | opp_overlap 3037183 AACTTTTTCAAAAAA CTAAC CGT GTTAG TCCTTGTGCGACATG Ctha_2530 3038274 - 3037192 - | OmpA/MotB domain protein TERM 4187 3037669 - 3037644 - G 70 -2.5 -4.93365 | opp_overlap 3037667, overlap 3037665 TGTCATAAGCAAAAA GGATATTGCTG AGCT CAGGAACTTCC ACAATCAAAGTGGAT TERM 4188 3038488 - 3038469 - H 77 -6.4 -4.66938 | ATTTCTAACAGAAAA GCGGCA AAATACCA TGCCGC CTAACTCTTTTCTAA TERM 4189 3038786 - 3038796 + G 84 -8.2 -4.72272 | AATAAAGCTACCGGA CGCG CTT CGCG TTTTTGATGCGCGGG Ctha_2531 3038706 - 3039263 + | Phosphoesterase HXTX Ctha_2532 3040875 - 3039319 - | carboxyl transferase TERM 4190 3039348 - 3039363 + g 73 -7.6 -4.05714 | overlap 3039334 TTCCGTGCTTTTTGC GTGGAT TTTC ATCCAC TTTGTGCTTAAGCAT TERM 4191 3041154 - 3041140 - H 93 -4.2 -5.85011 | opp_overlap 3041140 GAAAAAGTAAAAAAA CGGAAA ACC TGTCCG CTTTAGGCGGGAAAT TERM 4192 3044451 - 3044438 - g 79 -9.5 -3.7456 | overlap 3044430 ACAACCACAGCCAAA GCCGC TGAT GCGGC GCGACAGCAACCACC Ctha_2533 3041459 - 3044590 + | preprotein translocase, SecA subunit TERM 4193 3045401 - 3045411 + G 71 -6.8 -4.19506 | ACGCTGGACAAATCG TCGG AGA CCGA TTTTCAAGTTGGGAT TERM 4194 3048737 - 3048724 - g 70 -5.2 -4.3767 | opp_overlap 3048724 GTACACGACAACAAA CGCC ATTCCG GGCG ATTTATTACAAAAAG Ctha_2534 3044717 - 3050386 + | hypothetical protein TERM 4195 3050446 - 3050462 + G 78 -6.5 -4.72486 | overlap 3050441 TATAAAAACTTGGCT GAGTGGC TTA GTCGCTC TTTTTGCACTTTGTC TERM 4196 3050827 - 3050847 + G 83 -6.1 -5.08824 | overlap 3050829 TATTGATGATTTGCT TAGCCGTTT AGA AAGCGGCGA TTTTTTGGATGGAAC Ctha_2535 3050405 - 3051484 + | hypothetical protein Ctha_2536 3051496 - 3052398 + | hypothetical protein Ctha_2537 3052420 - 3052959 + | hypothetical protein Ctha_2538 3053028 - 3054209 + | hypothetical protein Ctha_2539 3054300 - 3055457 + | hypothetical protein TERM 4197 3055474 - 3055509 + F 100 -14.4 -4.32579 | gap 1, opp_overlap 3055474 3055478, overlap 3055460 3055478 CTTTTTTCTTAAGAA GAAACAATACTC-TTCT CAA AGAATGAGTATTGTTTC TTTATTATCGCGTAT TERM 4198 3055509 - 3055474 - f 100 -14.4 -3.61398 | gap 1, opp_overlap 3055460 3055474 3055478, overlap 3055478 CTTTTTTCTTAAGAA GAAACAATACTC-TTCT CAA AGAATGAGTATTGTTTC TTTATTATCGCGTAT TERM 4199 3055478 - 3055505 + F 90 -9.4 -4.73677 | gap 1, opp_overlap 3055474 3055478, overlap 3055460 3055474 TTTCTTAAGAAGAAA CAATACTC-TTCT CAA AGAATGAGTATTG TTTCTTTATTATCGC TERM 4200 3055505 - 3055478 - f 86 -9.4 -4.44667 | gap 1, opp_overlap 3055460 3055478 3055474, overlap 3055474 TTTCTTAAGAAGAAA CAATACTC-TTCT CAA AGAATGAGTATTG TTTCTTTATTATCGC Ctha_2540 3055579 - 3057861 + | phosphoribosylformylglycinamidine synthase II TERM 4201 3057893 - 3057880 - f 73 -3.9 -5.05782 | ACGGATTCTAAAAAA TCTTT TCAA AAAGA AGCCTGTCAACTTGA Ctha_2541 3057991 - 3058416 + | RNA polymerase, sigma-24 subunit, ECF subfamily TERM 4202 3058411 - 3058391 - f 74 -6.2 -4.64861 | overlap 3058393 TTCTCGGAAAAGAAA TCGCAGAA CGCGC TTCTGCAA ACTGATTTTTACACG TERM 4203 3058445 - 3058459 + F 100 -8.5 -5.20783 | opp_overlap 3058444 TACTTCACCACAGAG CCGCC TTCAT GGCGG TTTTTGTGTTTACAT Ctha_2542 3058528 - 3059517 + | ADP-L-glycero-D-manno-heptose-6-epimerase TERM 4204 3059525 - 3059506 - f 78 -10 -3.36655 | opp_overlap 3059511, overlap 3059504 3059502 TTACAATCAAATATA TCGCAGGG TTAG CCCTGCAA AACCCATTTATCAAA TERM 4205 3059606 - 3059619 + G 78 -6.7 -4.66833 | opp_overlap 3059605 CACGCTAAAAGGGAT TGAGC CCAT GCTCA TTTTTGGAGTTCAAG Ctha_2543 3059571 - 3060578 + | PhoH family protein Ctha_2544 3060700 - 3060999 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein Ctha_2545 3061304 - 3061600 + | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 4206 3061626 - 3061645 + T 100 -11.4 -5.54079 | TCAATAGATTCTACA GCGGCTTG CTTG CAGGCCGC TTTTTTAGTTTTTGG Ctha_2546 3062030 - 3061650 - | Rieske (2Fe-2S) domain protein Ctha_2547 3062137 - 3062367 + | hypothetical protein Ctha_2548 3062364 - 3062822 + | hypothetical protein TERM 4207 3063422 - 3063393 - gf 70 -2.1 -5.03314 | opp_overlap 3063414, overlap 3063394 3063395 3063397 TTTACGCGGAAAAAA TTGACGAGATAAA GTGC TTTATCGCGTCGG GCGATGTGTATCAGA TERM 4208 3063765 - 3063785 + GF 74 -5.4 -4.66833 | opp_overlap 3063765, overlap 3063780 GAATTTGCAAAAAAG GCTCGG TTTGCGTTT CCGAGC TTTTTCAGGTTGAAA TERM 4209 3064512 - 3064535 + GF 88 -6.6 -5.26119 | GTCTGTTTGCGAAGG CGACGGCCAA AGGC TTTGCCGACG TTTTGTTTTTCAACG TERM 4210 3064621 - 3064603 - gf 84 -2.4 -5.75342 | gap 1, opp_overlap 3064587 GTTTTTGAAAAAAAA CGGTCGT TTTTTC ACG-CCG CCGATTGATTGCGGA Ctha_2549 3062936 - 3064825 + | para-aminobenzoate synthase, subunit I TERM 4211 3064955 - 3064968 + GF 71 -3.7 -4.84529 | opp_overlap 3064935 3064938 GCAGGCCGAACTGAT GCTCG AACA CGCGC TTTTTCCGTTTATGG TERM 4212 3064972 - 3064985 + GF 72 -3.1 -5.02074 | TCGAACACGCGCTTT TTCCG TTTA TGGAA TTTTTTCAGCCGTGC Ctha_2550 3064797 - 3065813 + | hypothetical protein TERM 4213 3065889 - 3065907 + F 70 -5.2 -4.56597 | overlap 3065890 TATCATTTTTATTAT CTCGGTCA TGA TGGCCGAA TTTTTAGACGACAGC TERM 4214 3065890 - 3065906 + F 72 -8.7 -3.33744 | overlap 3065889 ATCATTTTTATTATC TCGGTCA TGA TGGCCGA ATTTTTAGACGACAG Ctha_2551 3065969 - 3066469 + | Redoxin domain protein TERM 4215 3066529 - 3066550 + T 100 -11.6 -4.4874 | overlap 3066521 AGTTCAATGTTGTAG GGGCGAAC CGATGT GTTCGCCC TTTTGCATTTTTGCG TERM 4216 3066709 - 3066672 - T 100 -12.1 -4.83615 | opp_overlap 3066678, overlap 3066673 3066678 CATTTTGCACAAAAA GCAAAAGCGCCTTCTCC GATT GGAAAAGGCGCTTTTTT ATTTTAAGCGAAACG TERM 4217 3066708 - 3066673 - T 100 -15.6 -3.49687 | opp_overlap 3066678, overlap 3066672 3066678 ATTTTGCACAAAAAG CAAAAGCGCCTTCTCC GATT GGAAAAGGCGCTTTTT TATTTTAAGCGAAAC TERM 4218 3066703 - 3066678 - T 100 -15.5 -4.82678 | opp_overlap 3066678, overlap 3066673 3066672 GCACAAAAAGCAAAA GCGCCTTCTCC GATT GGAAAAGGCGC TTTTTTATTTTAAGC TERM 4219 3066678 - 3066703 + T 100 -13.3 -5.79595 | opp_overlap 3066678 3066673 3066672 GCACAAAAAGCAAAA GCGCCTTCTCC GATT GGAAAAGGCGC TTTTTTATTTTAAGC Ctha_2552 3068592 - 3066739 - | ATP-citrate lyase/succinyl-CoA ligase Ctha_2553 3069858 - 3068662 - | ATP-grasp domain protein TERM 4220 3069596 - 3069606 + g 80 -5.4 -5.03715 | ACCTGCTTAATGACT GTTG TGC CAAC TTTTTTGCCGATCAT TERM 4221 3070479 - 3070493 + G 70 -10 -2.95126 | opp_overlap 3070470, overlap 3070477 TTGAAATTGGCGCAG GCCCAA CTT TTGGGC TCATTTCCGATTATG Ctha_2554 3070019 - 3070735 + | hypothetical protein TERM 4222 3070785 - 3070766 - T 100 -11.4 -5.28176 | opp_overlap 3070766 CGTATCCACAAAAAA GCCGGCCT CAAA AGACCGGC TTTTTTATTTCTTAT TERM 4223 3070766 - 3070785 + T 100 -9.2 -5.82036 | opp_overlap 3070766 CGTATCCACAAAAAA GCCGGCCT CAAA AGACCGGC TTTTTTATTTCTTAT Ctha_2555 3072353 - 3070815 - | proton-translocating NADH-quinone oxidoreductase, chain N Ctha_2556 3074053 - 3072416 - | proton-translocating NADH-quinone oxidoreductase, chain M Ctha_2557 3076434 - 3074116 - | proton-translocating NADH-quinone oxidoreductase, chain L TERM 4224 3075859 - 3075891 + g 77 -3.3 -5.252 | overlap 3075863 AATACCGAGCCACAT GCCAATGTCACCAAC ACG GTTGGTGAGAAATGC TTTTTTCTGCGCATC Ctha_2558 3076789 - 3076478 - | NADH-ubiquinone oxidoreductase chain 4L Ctha_2559 3077342 - 3076806 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Ctha_2560 3078186 - 3077380 - | 4Fe-4S ferredoxin iron-sulfur binding domain protein TERM 4225 3077430 - 3077454 + g 74 -5.7 -4.564 | overlap 3077431 TTTTCGCTGCTGCCA TTCTTGCCG CAAGCGC CGGCGAGAG TTTTGGTTTCGGCTT Ctha_2561 3079333 - 3078239 - | NADH dehydrogenase (quinone) TERM 4226 3078699 - 3078680 - G 73 -4.2 -4.85177 | overlap 3078682 AAAGTAGATTAAAAA CGCCAACC ATGC GATTGGAG ATTGGAACAAAAAGT Ctha_2562 3080557 - 3079358 - | NADH dehydrogenase (quinone) Ctha_2563 3081333 - 3080611 - | NADH (or F420H2) dehydrogenase, subunit C TERM 4227 3081140 - 3081159 + g 76 -2 -5.40474 | overlap 3081141 TTCGGTTTATCCGGA GCAGGAGA AGCA TCTCCCGA TTTTTTTGCAGCCAT Ctha_2564 3081964 - 3081377 - | NADH-quinone oxidoreductase, B subunit Ctha_2565 3082467 - 3082009 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 TERM 4228 3082591 - 3082568 - R 83 -7.6 -4.6008 | gap 1, opp_overlap 3082559 3082566 3082568 3082569 3082570, overlap 3082559 3082570 3082586 AAAACAGAACTAAAA TAGTCCGTTTT ACC AAAACGGAC-A TGTCTTTAAATATAA TERM 4229 3082569 - 3082591 + r 75 -9.2 -3.28866 | opp_overlap 3082559 3082568 3082570 3082586, overlap 3082559 3082568 3082566 3082570 AAACAGAACTAAAAT AGTCCGTTTT ACC AAAACGGACA TGTCTTTAAATATAA TERM 4230 3082590 - 3082570 - R 100 -12.7 -3.87807 | opp_overlap 3082559 3082569 3082568 3082566 3082570, overlap 3082559 3082568 3082586 AACAGAACTAAAATA GTCCGTTTT ACC AAAACGGAC ATGTCTTTAAATATA TERM 4231 3082570 - 3082590 + r 89 -12.7 -2.56838 | opp_overlap 3082559 3082570 3082568 3082586, overlap 3082559 3082569 3082568 3082566 AACAGAACTAAAATA GTCCGTTTT ACC AAAACGGAC ATGTCTTTAAATATA Ctha_2566 3082969 - 3082649 - | hypothetical protein TERM 4232 3083207 - 3083219 + G 79 -10.5 -3.58269 | opp_overlap 3083207 TTTAGATAAAAAAAA CGGGC AAA GCCCG TTTAGAAATGGATTA TERM 4233 3083219 - 3083207 - g 100 -10.5 -6.02914 | opp_overlap 3083207 TTTAGATAAAAAAAA CGGGC AAA GCCCG TTTAGAAATGGATTA Ctha_2567 3083085 - 3083405 + | transcriptional coactivator/pterin dehydratase Ctha_2568 3084523 - 3083426 - | Tetratricopeptide TPR_2 repeat protein TERM 4234 3084155 - 3084141 - G 75 -2.8 -5.22006 | TTAGCAGAATAAAAA TTTCCA CTC TGGTAA TATGCGAGGCCTAAA TERM 4235 3084303 - 3084331 + g 70 -2.4 -4.97461 | gap 1, overlap 3084315 CCAGTGGGATTCTTT GTCGTTGCAGCTT CAAA AAGCA-CAGCGGC TTTTTCATATTTCTT Ctha_2569 3088368 - 3084667 - | 2-oxoglutarate dehydrogenase, E1 subunit TERM 4236 3084736 - 3084724 - G 71 -3.4 -4.81851 | ATGCAAATCCAAAAA TCCT GTTGA AGGA CTTGAGTTTTCACTT TERM 4237 3085818 - 3085835 + g 72 -2.7 -4.98255 | gap 1, overlap 3085811 3085810 3085821 GCAAGGTTTCAAGCG GCACTTGA GTT TCAGG-GC TTTTTGTGATTGGCA TERM 4238 3087204 - 3087215 + g 72 -3 -4.93547 | CTCGATAGGAGTTGA TCAT CTGC ATGA TTTTTGCTTGCTTGA TERM 4239 3088452 - 3088432 - R 100 -9 -5.56112 | opp_overlap 3088431 ACAAAAATGAAAAAA CGTTAGGC TTTTT GCCCAACG GCTTCTGTAAATCGC Ctha_2570 3089483 - 3088434 - | ferrochelatase TERM 4240 3090543 - 3090532 - g 72 -5.8 -4.44915 | overlap 3090520 3090534 3090537 CAATCACTTAGAAAA GCGA ACGC TCGC TCCAAGCAAAATGCG Ctha_2571 3089977 - 3090588 + | KWG Leptospira repeat protein TERM 4241 3090673 - 3090637 - T 86 -9.5 -4.4261 | opp_overlap 3090643, overlap 3090638 3090643 GTGCGAACAGTAAAA TGCAAAGGGCGACTTTC TGA AAAAATCGCCCTTTTCT ATGAAGCTCTTATAA TERM 4242 3090672 - 3090638 - T 95 -13 -3.25084 | opp_overlap 3090643, overlap 3090637 3090643 TGCGAACAGTAAAAT GCAAAGGGCGACTTTC TGA AAAAATCGCCCTTTTC TATGAAGCTCTTATA TERM 4243 3090667 - 3090643 - T 90 -11.5 -3.95448 | opp_overlap 3090643, overlap 3090638 3090637 ACAGTAAAATGCAAA GGGCGACTTTC TGA AAAAATCGCCC TTTTCTATGAAGCTC TERM 4244 3090643 - 3090667 + T 86 -8.6 -4.53303 | opp_overlap 3090643 3090638 3090637 ACAGTAAAATGCAAA GGGCGACTTT CTGAA AAAATCGCCC TTTTCTATGAAGCTC Ctha_2572 3091685 - 3090708 - | Nucleotidyl transferase Ctha_2573 3092653 - 3091799 - | fatty acid hydroxylase Ctha_2574 3093568 - 3092696 - | N-acetylneuraminate synthase TERM 4245 3092902 - 3092886 - G 79 -8.7 -4.36914 | TGGCGCTCGATAAAA GTTGCGC CTA ACGCAAC CGACGCCCAAGTGGT TERM 4246 3093184 - 3093174 - G 74 -8.2 -3.91984 | opp_overlap 3093174 ATATCGGTCAAAGAA GCGG AAG CCGC TTTATAGCAGAGCGG TERM 4247 3093174 - 3093184 + g 74 -8.2 -3.85698 | opp_overlap 3093174 ATATCGGTCAAAGAA GCGG AAG CCGC TTTATAGCAGAGCGG Ctha_2575 3094164 - 3093631 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family Ctha_2576 3095078 - 3094266 - | short-chain dehydrogenase/reductase SDR Ctha_2577 3096005 - 3095133 - | Endonuclease/exonuclease/phosphatase TERM 4248 3095642 - 3095628 - G 73 -11.4 -2.71979 | overlap 3095627 TAAGAGATAATTAAT CTGGCG ATG CGCCAG CACTTGCAATTGGCT TERM 4249 3096195 - 3096219 + H 79 -8.5 -4.08945 | opp_overlap 3096195 3096207 GGTGAACAAAAAAAA GACTGTCAAGC AGG GCTCGACAGCC TTTTAAGGAGGTGCT TERM 4250 3096219 - 3096195 - H 100 -12.9 -6.09888 | opp_overlap 3096195, overlap 3096207 GGTGAACAAAAAAAA GACTGTCAAGC AGG GCTCGACAGCC TTTTAAGGAGGTGCT TERM 4251 3096482 - 3096495 + H 79 -2.4 -5.63645 | CTTTTTCGCAGGTGG TTGC AAGAAC GCAA TTTTTTGTATTTTGC TERM 4252 3096972 - 3096984 + G 71 -6.9 -4.17132 | overlap 3096970 TTTTGTTTTGGGCCC GCCGC TTG GTGGC TTTCTTAAAACGTTT Ctha_2578 3096541 - 3097737 + | major facilitator superfamily MFS_1 TERM 4253 3098206 - 3098192 - g 70 -2.1 -5.06414 | gap 1, overlap 3098196 TTCTTTGAAGAAAAA GAAGCG CTCT CGCT-C GTCATCACGCCTGAA TERM 4254 3098279 - 3098311 + G 72 -9.1 -3.53091 | CACATTGCTGTGCAA GCCGGCGTGCCCA TCATTTT TGGGTATGCCGAC TTTAAGCGAAAAACT Ctha_2579 3097898 - 3098467 + | phospholipid/glycerol acyltransferase Ctha_2580 3099239 - 3098478 - | Superoxide dismutase TERM 4255 3099822 - 3099804 - g 72 -3 -4.91511 | overlap 3099805 3099806 AGCCGATCACAAAAA CGCTCGAC GAA GCCGAAAG ACTCATCGCGCTGGA TERM 4256 3100171 - 3100183 + G 76 -4.1 -5.00884 | TAGCCGCACAAAATC TCGTA AGG TGCGA TTTTTTAGCAAAAAT TERM 4257 3100406 - 3100393 - g 71 -3.7 -4.85782 | CGTGCCAAAAACAAA CGCGC TGAA GTGCG AGCTCGAAGCATTTG Ctha_2581 3099491 - 3100552 + | oxidoreductase domain protein Ctha_2582 3100993 - 3102771 + | asparagine synthase family amidotransferase TERM 4258 3104185 - 3104170 - g 75 -6.1 -4.55128 | ACGGCGAAAGCAAAA TCCCG GTTGAT CGGGA AACCGAAAAATGCGT Ctha_2583 3102783 - 3104540 + | GNAT-family acetyltransferase TIGR03103 TERM 4259 3104604 - 3104634 + T 100 -17 -4.18762 | ATTTGTTCAGTATTG GTAAGGGTGACCCA AGA TTGGTCACCCTTAC TTTTAGCTAAGACTT Ctha_2584 3109562 - 3104676 - | peptidase S8 and S53 subtilisin kexin sedolisin TERM 4260 3107212 - 3107224 + g 71 -3.3 -4.76041 | overlap 3107202 TGTGAGGAGGTTGTT TCTCC TTG GGTGA TTTTTACTGAATGTG TERM 4261 3108873 - 3108885 + g 73 -7.7 -4.11371 | AGAGATGTCAGCGCC TGGTG TGC CACCA TTTTGCCCGGTATTA TERM 4262 3110245 - 3110265 + H 80 -6.1 -5.02502 | opp_overlap 3110245 AGAAACTAACAAAAA CCATCATCG TTT CAGTGATGG TTTTTCTCTCATATC TERM 4263 3110265 - 3110245 - H 84 -6.1 -5.25906 | opp_overlap 3110245 AGAAACTAACAAAAA CCATCATCG TTT CAGTGATGG TTTTTCTCTCATATC TERM 4264 3110362 - 3110382 + G 76 -9.1 -3.76413 | ATACGGATCGACCGT GAGTATATC TTG GATATGCTC TTTAAACTTTTGAAC Ctha_2585 3110338 - 3111498 + | hydrolase, peptidase M42 family TERM 4265 3111645 - 3111675 + G 70 -2.4 -4.93365 | GGTGAATTTTTTCAT CGGCTGGTTTTTGA CGC TCATCAGCTTGCCG TTTTTGATTCTCACA Ctha_2586 3111508 - 3111843 + | membrane protein of unknown function TERM 4266 3111873 - 3111852 - T 100 -11.6 -4.74103 | opp_overlap 3111852 CTTTTAATGCAAAAA GGACACGC TTTTGG GCGTGTCC TTTTTTGTATCAGAC TERM 4267 3111852 - 3111873 + T 100 -12.3 -5.36441 | opp_overlap 3111852 CTTTTAATGCAAAAA GGACACGCT TTTG GGCGTGTCC TTTTTTGTATCAGAC Ctha_2587 3113772 - 3111904 - | heat shock protein Hsp90 TERM 4268 3113923 - 3113898 - R 91 -9.7 -4.78848 | opp_overlap 3113898 TTGCGAAATAGAAAA GCCGCATGAAT TTTC ATCCAAGCGGC TTAAGTTATTCAAAA Ctha_2588 3114657 - 3113947 - | phage shock protein A, PspA Ctha_2589 3115091 - 3114696 - | hypothetical protein TERM 4269 3114899 - 3114885 - G 71 -10 -3.15544 | GTTCATTTGTAGCAA GCGCTT ATA AAGCGC TAAGCTATCGGCGAC Ctha_2590 3115506 - 3115105 - | heat shock protein DnaJ domain protein TERM 4270 3115431 - 3115403 - G 72 -5.4 -4.54727 | gap 1, opp_overlap 3115403 3115405, overlap 3115405 3115408 GCTTTGAAAGCAAAA TAGGAT-TCAAGC CAAC GCTTGAAATCCTC TTGATGAAATAAGGT TERM 4271 3115429 - 3115405 - G 71 -8 -3.88396 | gap 1, opp_overlap 3115405 3115403, overlap 3115403 3115408 TTTGAAAGCAAAATA GGAT-TCAAGC CAAC GCTTGAAATCC TCTTGATGAAATAAG Ctha_2591 3116436 - 3115708 - | TPR repeat-containing protein TERM 4272 3116155 - 3116123 - G 79 -2 -5.5604 | gap 2, overlap 3116125 3116126 3116127 TCAACCAAGAAAAAA GACGGTACGCTGGAAA TTT TATCCTGCGTAC-G-C AAATGGGCAAGTTCT TERM 4273 3116154 - 3116125 - G 72 -5.7 -4.40357 | gap 1, overlap 3116123 3116126 3116127 AACCAAGAAAAAAGA CGGTACGCTGGAAA TTT TATCCTGCGTAC-G CAAATGGGCAAGTTC Ctha_2592 3118306 - 3116486 - | hypothetical protein TERM 4274 3116828 - 3116850 + g 79 -4.2 -5.14965 | gap 1 GGCCTTGTAGCGCCG TGCATAGGC CACATC GCCT-TGCA TTTTTTCGTCGCGCT Ctha_2593 3119154 - 3118303 - | pyrroline-5-carboxylate reductase Ctha_2594 3120075 - 3119311 - | hypothetical protein TERM 4275 3119350 - 3119371 + g 70 -2.3 -4.9934 | gap 1, overlap 3119351 TACCGTTGCTGGCCG C-TGCTGATA TTT TTTCAGCATG TTTTTCTCATCTTGT TERM 4276 3120142 - 3120154 + r 85 -4.8 -5.54907 | GAACTTCTTCATTTT CACG AATCC CGTG TTTTTCTTTTATCAG Ctha_2595 3121181 - 3120141 - | von Willebrand factor type A TERM 4277 3120315 - 3120358 + g 71 -6.8 -4.07568 | overlap 3120321 TTCAAAGTCAGAACC TTGCGGGGCAATCCGA TAATAATTGCCT TTGGTTTGCTCCGCAA TTTTGCGCAGCAGCG TERM 4278 3121086 - 3121049 - G 80 -10 -3.85909 | gap 2, opp_overlap 3121076, overlap 3121043 TTAGCGAAAGCGAAA GCT-GACGCA-TGAGCGA ACTT TCGCCCAGCGCGTCGAGC GCTTTGAATCGCTGT TERM 4279 3121423 - 3121413 - H 81 -5.4 -5.26875 | overlap 3121417 TTTTCAACGAAAAAA CTCA CCT TGAG TAAGGGACTTTTTCT Ctha_2596 3121449 - 3122246 + | protein of unknown function DUF45 Ctha_2597 3122718 - 3122275 - | transcriptional regulator, MarR family TERM 4280 3122754 - 3122733 - H 100 -4.5 -6.09133 | opp_overlap 3122733 3122742 3122744, overlap 3122735 3122736 TATTTGAAAAAAAAA TATTGACAA TACA TTGTCAAAA TAATATATTGACAGC TERM 4281 3122752 - 3122735 - H 79 -7.1 -4.69028 | opp_overlap 3122733 3122742 3122744, overlap 3122733 3122736 TTTGAAAAAAAAATA TTGACAA TACA TTGTCAA AATAATATATTGACA TERM 4282 3122778 - 3122736 - H 74 -8.6 -3.3979 | opp_overlap 3122733 3122742 3122744, overlap 3122735 3122733 TTGAAAAAAAAATAT TGACAATACATTGTCAAAAT AAT ATATTGACAGCGTGTTGTCA TAAAGAAACAATGGG TERM 4283 3123180 - 3123199 + G 85 -7.2 -4.96773 | GTTCAAAGCCTCGAA TTGATTGC CGGC GCAGTCAA TTTATTTTTGATTAC Ctha_2598 3122826 - 3123266 + | hypothetical protein TERM 4284 3123686 - 3123715 + G 72 -6.5 -4.25104 | gap 1 ACCCAATAAATTTGA GCACCTGTTTTCGT TAG GCGAAAA-AGGAGC TTTTGATAGGAAACG Ctha_2599 3123327 - 3123737 + | hypothetical protein TERM 4285 3124104 - 3124114 + G 71 -6.8 -4.17089 | GTACCTTGGCCCAAT GGTC ACC GACC TTTTAGCCATTTCAG Ctha_2600 3123775 - 3124275 + | hypothetical protein TERM 4286 3124322 - 3124344 + F 79 -7 -4.62203 | CACAAGAAGTATTCA GGGCAACT TTTTTTT GGTTGCCC TTTTGCTTATTTGGC TERM 4287 3124788 - 3124760 - g 95 -12.5 -4.06491 | opp_overlap 3124767, overlap 3124762 CGAATTTGACACAAA CACCAAACTGACC GAT GGCCAGTTTGGCA TTCAAGAACCCATTG TERM 4288 3124786 - 3124762 - g 100 -15.1 -3.62348 | opp_overlap 3124767, overlap 3124760 AATTTGACACAAACA CCAAACTGACC GAT GGCCAGTTTGG CATTCAAGAACCCAT Ctha_2601 3124467 - 3125081 + | 5-formyltetrahydrofolate cyclo-ligase TERM 4289 3125981 - 3125966 - g 74 -5.4 -4.72386 | GAAACCATCGAAAAA GGCATT CGCC AACGCC GCTACGGCTCAGTGG TERM 4290 3126219 - 3126233 + G 71 -7.2 -4.02022 | opp_overlap 3126201 TCTCCGAAATTCGGC GCAAAA ACA TTTTGC TTTATCATCCTTACG TERM 4291 3126382 - 3126398 + G 76 -8 -4.26076 | opp_overlap 3126371, overlap 3126395 AGAAGCCGCCGAACG CGGCAA GCAGG TTGCCG TTTTGGTAGAACTAA Ctha_2602 3125138 - 3127285 + | Polyphosphate kinase Ctha_2603 3127287 - 3127715 + | sugar-phosphate isomerase, RpiB/LacA/LacB family Ctha_2604 3127868 - 3128545 + | putative signal transduction protein with CBS domains TERM 4292 3128583 - 3128607 + T 100 -11.5 -5.4505 | opp_overlap 3128583 3128571 AAAGTCTCCCAAAAA GCCCGATTG ACAAATA CAATCGGGC TTTTTTATTGGACGC TERM 4293 3128607 - 3128583 - T 100 -11.5 -4.58685 | opp_overlap 3128583, overlap 3128571 AAAGTCTCCCAAAAA GCCCGATTG ACAAATA CAATCGGGC TTTTTTATTGGACGC TERM 4294 3128648 - 3128671 + T 84 -2.4 -5.75342 | gap 1, opp_overlap 3128648 TTGCTTAATGCAAAG CCGTTGCGCTG CAA CA-TACAACGG TTTTTTTTGAGAGCG Ctha_2605 3129574 - 3128690 - | photosynthetic complex assembly protein 2 TERM 4295 3129624 - 3129612 - R 72 -6.3 -4.47873 | ACAATATTTATAAAA GCAAA AGA TTTGC ATTACCGAATTTAAC TERM 4296 3129650 - 3129677 + r 72 -7.8 -3.75657 | overlap 3129651 TTAACATTCACCTCA CCAAATGGCAAC GTTT GTTTCTATTTGG TTATTGAATATTTGA Ctha_2606 3130727 - 3129678 - | bacteriochlorophyll/chlorophyll synthetase TERM 4297 3130604 - 3130614 + g 74 -5.4 -4.57837 | AACTACTGAACAAGC GCTT TTC AAGC TTTTTGGAGCCGTCT Ctha_2607 3130925 - 3131905 + | Abortive infection protein Ctha_2608 3132385 - 3132011 - | response regulator receiver protein Ctha_2609 3135057 - 3132397 - | multi-sensor signal transduction histidine kinase TERM 4298 3133331 - 3133316 - G 78 -6.2 -4.57073 | opp_overlap 3133316 TAGCGCCCGTAAAAA TTCATG GAAC CATGAA TGACTTCGCCACGAA TERM 4299 3133723 - 3133737 + g 78 -5.6 -4.77757 | opp_overlap 3133723 3133722 GGATTGGTTAAAAAC CAGGCG GTG CGCATG TTTTACTTTTTCCAA TERM 4300 3134310 - 3134328 + g 79 -3.1 -5.37043 | GCTCTTTGACTTGGC GAAGTGT TTGTT GCGCTTC TTTTTTATCTGAAAT TERM 4301 3134841 - 3134862 + g 88 -8.7 -4.83169 | opp_overlap 3134826 GCACACCTGGCTGGA GCGCTTTGG CCAG CGAAAGCGC TTTTTCTCCCGAAAT TERM 4302 3135699 - 3135727 + G 72 -6 -4.44667 | overlap 3135700 TTTATGGGCTTGGGG CTGCCGCTGGC-GC ACC GCTGCCAG-GGCAA TTTATTGTTGGGCGA TERM 4303 3135700 - 3135726 + G 71 -9.5 -3.26318 | overlap 3135699 TTATGGGCTTGGGGC TGCCGCTGGC-GC ACC GCTGCCAG-GGCA ATTTATTGTTGGGCG Ctha_2610 3135296 - 3135838 + | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 4304 3135901 - 3135917 + T 84 -2.3 -5.75342 | GAAACTCAGCTTGCT CGTTT TTTGCGC AAACG TTTTTTTTCAGGGCA Ctha_2611 3136724 - 3135891 - | serine O-acetyltransferase TERM 4305 3136445 - 3136418 - G 82 -7 -4.87133 | ACCCTTTAAAGAAAA GCAACGGTTCGT AGTA ATAAACCGTCGC CGGATCGCGCTCGAC TERM 4306 3137071 - 3137041 - R 74 -9.8 -2.73067 | gap 1, overlap 3137038 TTGAACGAGATATTA TG-GGTTCCCGCG TTTTCG CACGGGAACCTCA GAACGAAGCTTTCGG Ctha_2612 3142031 - 3137100 - | hypothetical protein TERM 4307 3142369 - 3142381 + H 75 -3.3 -5.2112 | overlap 3142370 TGTCTTAATACGGGT CGGGA TCA TCCCC TTTTTTGCTGCTGTT TERM 4308 3142671 - 3142681 + H 78 -5.4 -5.09762 | CTGAAAATAGGTTTA TGCT CGG AGCA TTTTATTTGTTAAAA Ctha_2613 3142738 - 3143166 + | 6-pyruvoyl tetrahydropterin synthase and hypothetical protein Ctha_2614 3143811 - 3143170 - | Methyltransferase type 11 Ctha_2615 3144878 - 3143940 - | hypothetical protein TERM 4309 3144773 - 3144783 + g 85 -6.8 -5.0916 | TGATGTTGGCTATCG CACG CTC CGTG TTTTTATGTTCCCAA TERM 4310 3144853 - 3144870 + g 71 -6.9 -4.03078 | AAAATTGGATTCATC CGCAGCG CTTG CGCTTCG TTTATCATATAATAA TERM 4311 3144951 - 3144965 + H 91 -8.6 -4.9181 | CAAAAATCACCATTT CCTTGA ATC TCAAGG TTTTTGCTATTGTCT TERM 4312 3145495 - 3145511 + G 71 -8 -3.9777 | GCTATTACAAAGCCT CGAACG CCATT CGTTCG TTTATCGGTGTTCCG TERM 4313 3145516 - 3145527 + G 71 -3.6 -4.73388 | CCATTCGTTCGTTTA TCGG TGTT CCGG TTTTTCATGGCGATT TERM 4314 3146127 - 3146138 + G 72 -5.8 -4.52589 | GGGAAAGAAAATTTT GCGA AGGT TCGC TTTTATGTAGAAGCA Ctha_2616 3145053 - 3146696 + | diguanylate cyclase with GAF sensor Ctha_2617 3146767 - 3147036 + | Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Ctha_2618 3147052 - 3147345 + | Ethanolamine utilization protein EutN/carboxysome structural protein Ccml TERM 4315 3147670 - 3147653 - g 72 -5.5 -4.47307 | opp_overlap 3147663 AAAGCAATATCAAAA CCAAGGG CTTT CGCTTGG CGATTTGATTAACGA TERM 4316 3147709 - 3147719 + G 72 -8.2 -3.72576 | opp_overlap 3147709 3147708 TGGGCTTGATTAAAG CCGC CAA GCGG TTTGATGAAACCCGC TERM 4317 3148253 - 3148242 - g 74 -3.6 -4.95957 | CAAATCAAGGAAAAA GCGA TTCG CCGC TTGCGCCATTCGCCA Ctha_2619 3147405 - 3148304 + | RNA polymerase, sigma 70 subunit, RpoD family TERM 4318 3148331 - 3148355 + F 86 -11.5 -3.75153 | TAATTCGCTCTCATT CGGCCAATC AGAAAAA GATTGGCCG TTTCCATTAAAAAAG TERM 4319 3148404 - 3148428 + F 76 -2.7 -5.40072 | opp_overlap 3148412 GATTTTTGGATTATT TTAACGCAGCG CAG CGCTTCGCGAA TTTTTTTACGGGCAC TERM 4320 3148541 - 3148531 - f 75 -3.2 -5.31456 | overlap 3148524 TGAAGCCAGAAAAAA CAGA GAG CCTG CTCGGTGTTTTCAAA TERM 4321 3149621 - 3149610 - g 80 -5.8 -4.98255 | GCCGAATTAGAAAAA GCCA AAAA TGGC GCTGAAATGGGCATC Ctha_2620 3148578 - 3149828 + | peptidase M16 domain protein TERM 4322 3150458 - 3150472 + G 75 -6.4 -4.46404 | CTACCATGCTGATTT TGGTGA GTT TCGCCA TTTTGATATTGATTG Ctha_2621 3149944 - 3151779 + | H(+)-transporting two-sector ATPase TERM 4323 3151782 - 3151796 + T 84 -4.2 -5.60993 | opp_overlap 3151784, overlap 3151784 GTTGGTGAATTAATT GATGCG AGG CGCATG TTTTTTTGTGAGGGA TERM 4324 3151784 - 3151794 + T 75 -6.8 -4.45201 | opp_overlap 3151784, overlap 3151782 TGGTGAATTAATTGA TGCG AGG CGCA TGTTTTTTTGTGAGG Ctha_2622 3152512 - 3151832 - | hypothetical protein TERM 4325 3152405 - 3152375 - G 73 -7.5 -4.11216 | overlap 3152398 3152399 GCTCCATTTTGAAAA CGCCGGCGCGT AAAGCCCAG AAACGCCGGCG CCGGCTTGAAACAAA Ctha_2623 3153498 - 3152518 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 4326 3153483 - 3153499 + g 75 -6.5 -4.5287 | overlap 3153486 TCAGATTTTTCAGTT CAAGCAG CTT CTGCATG TTTTACTTCGTTTCG Ctha_2624 3155286 - 3153502 - | extracellular solute-binding protein family 5 TERM 4327 3154507 - 3154492 - G 72 -4.7 -4.67011 | AATTTCATCCAAAAA TGGCA GTTGAT TGCCA GCTTCATCATGCTGC TERM 4328 3156284 - 3156251 - g 78 -6 -4.85599 | gap 1, overlap 3156263 3156271 CTTACCGCACAAAAA CAGGC-CACCCAAGC AAGCA ACTCGGCTGCGCCTG CCGCCAAATCACCCG TERM 4329 3156435 - 3156449 + G 72 -5.6 -4.39277 | opp_overlap 3156436, overlap 3156436 TGATTTTGAATCACA ACACGG TTT CCGTGG TTTCTTCTGATGTTA TERM 4330 3156448 - 3156436 - g 72 -9.1 -3.51329 | opp_overlap 3156435 3156436 GATTTTGAATCACAA CACGG TTT CCGTG GTTTCTTCTGATGTT Ctha_2625 3155825 - 3156811 + | response regulator receiver protein TERM 4331 3156867 - 3156905 + F 74 -9 -3.45788 | overlap 3156865 ACTCGTGCGTTTATT TGCAGGAAGGTATTATAT TTT ACAAAATAACTTCCTGCA TGTTCTCTTATGGAA Ctha_2626 3156915 - 3157538 + | ABC transporter-related protein TERM 4332 3159542 - 3159530 - g 76 -4.1 -5.03747 | AAATCGCGCAAAAAA GTTCC TCA GAAAC GCATCGCGGAGCTTC Ctha_2627 3157649 - 3159925 + | ribonuclease R TERM 4333 3160009 - 3160025 + F 81 -6.5 -4.86001 | overlap 3159989 ATTGCTTCAGCCAGA TGAAGGG TGA CCCCTCA TTTTTATCCAATGAT TERM 4334 3163385 - 3163408 + G 73 -2.4 -5.22289 | gap 1, overlap 3163392 GATTTGCTTTGGGGC TACGGCTGGGG CAT TCGCA-CCGTA TTTTTCTATTTCATC Ctha_2628 3160163 - 3163507 + | WD40 domain protein beta Propeller Ctha_2629 3163665 - 3164654 + | transcriptional regulator, AraC family Ctha_2630 3164868 - 3167243 + | TonB-dependent receptor plug Ctha_2631 3167257 - 3167547 + | hypothetical protein Ctha_2632 3168269 - 3167571 - | Methyltransferase type 12 TERM 4335 3168326 - 3168336 + H 73 -2.6 -5.26875 | TTAAATTTGCGCAAG TATT TAT AATA TTTTTTGCTTCAACC Ctha_2633 3168372 - 3168722 + | 7-cyano-7-deazaguanine reductase Ctha_2634 3170200 - 3168731 - | protein of unknown function DUF187 TERM 4336 3170298 - 3170279 - R 100 -7.1 -5.76237 | opp_overlap 3170279 TAGACAAATAAAAAA GCGCCTC CGTTTT GAGACGC TTTGAAGAAAATTAT TERM 4337 3170375 - 3170408 + r 76 -5.4 -5.0133 | opp_overlap 3170375 GAACTGCCCAAAAAA GCAAAGCATGATAT CGCCCA ATAGGATGCTTTGC TTTTTTCAGGGAATA TERM 4338 3170408 - 3170375 - R 80 -6.1 -5.03145 | opp_overlap 3170375 GAACTGCCCAAAAAA GCAAAGCATGATATC GCCC AATAGGATGCTTTGC TTTTTTCAGGGAATA Ctha_2635 3171063 - 3170428 - | hypothetical protein Ctha_2636 3174160 - 3171365 - | DNA polymerase I TERM 4339 3171573 - 3171589 + g 85 -6.5 -5.20216 | opp_overlap 3171550 TTGTGAATGTCGCTT GCAATGC CGA GCATGGC TTTTTTGATCATGTC TERM 4340 3171866 - 3171854 - G 76 -9.1 -3.83026 | CTGCGCGAGACCAAA CGGCA TGA TGCCG TAAAGCACGCCGAAA TERM 4341 3172723 - 3172739 + g 73 -10.1 -3.39772 | overlap 3172722 3172724 TCTCCGATTTTCCCT TGCCGAC AAG GTCGGCG TATTTGACGGTTTCA TERM 4342 3172724 - 3172738 + g 73 -11.4 -2.63381 | overlap 3172723 3172722 CTCCGATTTTCCCTT GCCGAC AAG GTCGGC GTATTTGACGGTTTC TERM 4343 3173673 - 3173657 - G 83 -6.5 -4.98531 | GCCGTAAAGCAAAAA CTCGTCA TTT TGGCGAG CGGGCTTGAGCAGCT TERM 4344 3173884 - 3173899 + g 84 -10.4 -3.96148 | TTAAATCAGTAGGTG GCGCAG GGCG CTGCGC TTTGTAATCGGGAAA TERM 4345 3174332 - 3174292 - R 85 -9.8 -4.05788 | gap 1, opp_overlap 3174302, overlap 3174295 3174297 TTTGGGGAAATCAAA TTAGAGGTAA-CGGCTGTC AAAC GACCGCCGTTTCCCCCTAA TATCATTGAATCAAG TERM 4346 3174328 - 3174295 - R 95 -13.1 -3.0693 | opp_overlap 3174302, overlap 3174292 3174297 GGGGAAATCAAATTA GAGGTAACGGCTGTC AAAC GACCGCCGTTTCCCC CTAATATCATTGAAT TERM 4347 3174326 - 3174297 - R 87 -12.1 -3.08586 | opp_overlap 3174302, overlap 3174295 3174292 GGAAATCAAATTAGA GGTAACGGCTGTC AAAC GACCGCCGTTTCC CCCTAATATCATTGA TERM 4348 3174302 - 3174321 + r 78 -9.2 -3.5882 | opp_overlap 3174297 3174295 3174292 TCAAATTAGAGGTAA CGGCTGTC AAAC GACCGCCG TTTCCCCCTAATATC Ctha_2637 3176384 - 3174351 - | Oxaloacetate decarboxylase TERM 4349 3174400 - 3174418 + g 83 -9.6 -4.08394 | opp_overlap 3174394 ATGAGCAATTGGCCT TCGACGAC CAT GTCGTTGA TTTTGACCGCAATCT TERM 4350 3175154 - 3175130 - G 70 -5.1 -4.4009 | gap 1 GCGCATTGTAGAAAA TCGTGAGCAG TTCTTC CTGCTCA-GA CTCGTTCATCTCCTC TERM 4351 3176345 - 3176360 + g 76 -8.2 -4.07568 | overlap 3176346 TTTGCACGATTTCCT TCGGGC TCAT GCCCGG TTTTGCAAAAACGAA TERM 4352 3176346 - 3176359 + g 70 -9.5 -3.04398 | overlap 3176345 TTGCACGATTTCCTT CGGGC TCAT GCCCG GTTTTGCAAAAACGA Ctha_2638 3177848 - 3176391 - | Carbamoyl-phosphate synthase L chain ATP-binding TERM 4353 3178021 - 3178009 - H 70 -4.9 -4.57569 | GTATTTCCCTAAAAA TTTTG CCC CAAAA TAAGGATTGACTTTC Ctha_2639 3178179 - 3178556 + | hypothetical protein TERM 4354 3179253 - 3179235 - g 89 -8.8 -4.65153 | opp_overlap 3179240 CGATACAAAGGAAAA CCGTGCGC CGA ACGCACAG GCGTATGCCGTTTTA Ctha_2640 3178615 - 3179382 + | Domain of unknown function DUF1828 Ctha_2641 3179395 - 3179811 + | protein of unknown function UPF0047 TERM 4355 3179805 - 3179816 + F 72 -2.2 -5.26316 | overlap 3179797 TGTGCAACTCGTCGG CGAG TAAG TTCG TTTTTTATGCGATAA Ctha_2642 3179924 - 3180895 + | tRNA(Ile)-lysidine synthetase Ctha_2643 3180871 - 3181824 + | short-chain dehydrogenase/reductase SDR Ctha_2644 3182264 - 3181830 - | Class I peptide chain release factor Ctha_2645 3183238 - 3182273 - | GCN5-related N-acetyltransferase Ctha_2646 3184606 - 3183308 - | sodium/hydrogen exchanger TERM 4356 3183701 - 3183691 - G 75 -3.2 -5.10516 | AAAAATCAAACAAAA GTCC CAT GAAC ACAAAGAAAAAGGTG Ctha_2647 3184701 - 3185588 + | MscS Mechanosensitive ion channel Ctha_2648 3186228 - 3185632 - | DNA-3-methyladenine glycosylase TERM 4357 3185690 - 3185680 - G 75 -3.2 -5.24129 | GGTTTTGATAAAAAA TCGC CAA GCAA GCTCGCGACTTTTTG Ctha_2649 3186399 - 3187436 + | Cobyrinic acid ac-diamide synthase Ctha_2650 3187460 - 3188395 + | parB-like partition protein Ctha_2651 3188395 - 3189021 + | hypothetical protein TERM 4358 3189182 - 3189194 + G 78 -6.2 -4.59109 | opp_overlap 3189181 TATTGTAGAAGTCAC CGCG CCAGA CGCG TTTTTAACCAATCTG TERM 4359 3189361 - 3189392 + G 86 -11 -3.67068 | gap 1, overlap 3189352 ATATTTTCTTTCGGC TGGTGC-ATGAAGCG GCT CGCTTTATCGCGCCA TTTGAGGATTTTGAT Ctha_2652 3189027 - 3189785 + | Dihydrodipicolinate reductase TERM 4360 3189844 - 3189819 - g 81 -13.3 -2.71593 | overlap 3189815 3189816 ACATGTACAAACCGA TTCCCCCTCAG GGAC CGGAGGGGGAA AAACCAGATGATTAT Ctha_2653 3189797 - 3190357 + | hypothetical protein TERM 4361 3190924 - 3190942 + G 70 -8.8 -3.32844 | CTTGCTTGCTTTTGT GAGGCCCA TGA TAGGCCTC TTCTCCGATACACAC TERM 4362 3191441 - 3191425 - g 72 -5.1 -4.57341 | AAGCTCGCTTAAAAA GTTGGCC GCA AACCAAC CCGTCTATCGTTTTT Ctha_2654 3190709 - 3192067 + | PUCC protein Ctha_2655 3192353 - 3192634 + | hypothetical protein TERM 4363 3192663 - 3192706 + GF 100 -9.7 -5.42259 | opp_overlap 3192669 AATCAATTTTATGCT TTTAAAGCAGGAGCGAGAC ATCACA GGCTTGTTCCTGCTTTCAA TTTTTTTAGACCTGA TERM 4364 3193136 - 3193124 - gf 70 -7.7 -3.66874 | opp_overlap 3193124 TCAACCTCATCCAAA TTGCC AGC GGCAA TAAATTTATTTTTTG Ctha_2656 3192658 - 3193233 + | hypothetical protein TERM 4365 3193320 - 3193333 + GF 75 -3.1 -5.24129 | gap 1, opp_overlap 3193319, overlap 3193303 3193301 CACAGAGCCGAAATT CG-CTC TAC GAGTCG TTTTTTCTCGAAGGC Ctha_2657 3193199 - 3193756 + | hypothetical protein TERM 4366 3193783 - 3193817 + F 72 -5.8 -4.36914 | opp_overlap 3193783, overlap 3193784 3193785 CATTTAATCTGAAAT TTCGTTCTCACTTT TCCACAC GAAGTGAGAACGGC TTTTCTGCAAAAAAA TERM 4367 3193784 - 3193816 + F 75 -9.3 -3.21934 | opp_overlap 3193783, overlap 3193783 3193785 ATTTAATCTGAAATT TCGTTCTCACTTT TCCACAC GAAGTGAGAACGG CTTTTCTGCAAAAAA TERM 4368 3193785 - 3193815 + F 76 -10.6 -2.52946 | opp_overlap 3193783, overlap 3193784 3193783 TTTAATCTGAAATTT CGTTCTCACTTT TCCACAC GAAGTGAGAACG GCTTTTCTGCAAAAA TERM 4369 3194341 - 3194351 + G 86 -3.2 -5.81032 | GTGGCGGGCTTTCCG GCTT GAC GAGC TTTTTTTTGCAATTG TERM 4370 3194876 - 3194859 - g 71 -3.5 -4.86621 | gap 1 AGCTTCAATGAAAAA CTGCTTCT TTC AGAAG-AG CTGTTCAACGCCATT Ctha_2658 3193914 - 3194993 + | putative adenylate/guanylate cyclase TERM 4371 3195586 - 3195570 - g 83 -4.4 -5.27335 | gap 1, opp_overlap 3195553 3195552 3195573, overlap 3195564 3195571 3195572 GTCGCGAAAGAAAAA CGCGGCA CGTT TGCCG-G CCTGATTGAAAAAAT Ctha_2659 3195042 - 3197120 + | glycogen debranching enzyme GlgX TERM 4372 3197632 - 3197609 - g 72 -5.2 -4.72986 | overlap 3197585 3197611 GACTTGCATCAAAAA CTCGGTGGAA AACT TTCCATCGCG TCAAAAGTTCAACTG TERM 4373 3197974 - 3197988 + G 79 -9.2 -4.13767 | opp_overlap 3197973 CAATTTGGAGGATAT CGCCGC TCC GCGGTG TTTTGAAATCGAAGC Ctha_2660 3197570 - 3198757 + | Malate dehydrogenase (oxaloacetate-decarboxylating) TERM 4374 3198810 - 3198794 - f 70 -8.1 -3.3506 | GCGAAACGCTTAGAA TTTTCCT AAC AGGAAAA AATCGATTCGCAACC TERM 4375 3198827 - 3198813 - f 79 -5 -5.27779 | CCTAACAGGAAAAAA TCGATT CGC AACCGA CACAGTCTTTTTGCA TERM 4376 3199245 - 3199234 - g 73 -4.4 -4.89339 | AATCATGCAGAAAAA GCAA TCGT TTGC TGAAGTTTTTGAAGC TERM 4377 3199743 - 3199757 + G 72 -9.2 -3.56836 | overlap 3199755 CGTATCCGAATCCTT CCGGTG CAG CGCCGG TTTCGGAAGTCATTT TERM 4378 3199981 - 3200003 + G 77 -9 -3.89524 | opp_overlap 3199969 3199968 AAGCTTTGACGACGA GGCCGCAGCC AAA GGCTGGTGCC TTTATAAAATGGGCT Ctha_2661 3199223 - 3200305 + | hydrogenase (NiFe) small subunit HydA TERM 4379 3201877 - 3201863 - g 74 -7 -4.30719 | overlap 3201859 CCGCGCGATAACAAA GGCCGC TCT GGGGCC TATGAAGCCGCGCTA Ctha_2662 3200309 - 3202030 + | nickel-dependent hydrogenase large subunit TERM 4380 3202224 - 3202251 + G 72 -2.7 -5.01553 | overlap 3202210 GGCGCTATATCCATT TTGGCGCTGGA TTTGTT TTCATTGCCAA TTTTCTTTATCGCTT Ctha_2663 3202040 - 3202729 + | Ni/Fe-hydrogenase, b-type cytochrome subunit TERM 4381 3202752 - 3202783 + T 88 -9.6 -4.57341 | gap 1, opp_overlap 3202757, overlap 3202757 CTCATGATTTATCAA GA-AAAGGCGACC CTACTCT GGTCGCCTTTATC TTTTTAGAACCCATT TERM 4382 3202757 - 3202777 + T 89 -9.7 -4.55887 | opp_overlap 3202757, overlap 3202752 GATTTATCAAGAAAA GGCGACC CTACTCT GGTCGCC TTTATCTTTTTAGAA TERM 4383 3202777 - 3202757 - T 91 -9.7 -4.72497 | opp_overlap 3202752 3202757 GATTTATCAAGAAAA GGCGACC CTACTCT GGTCGCC TTTATCTTTTTAGAA Ctha_2664 3203936 - 3202803 - | glycosyl transferase group 1 TERM 4384 3203503 - 3203528 + g 72 -4.7 -4.58395 | GCAATTGCGGCGGCT GTGTGGCGA AAAACAAA TCGCTGCAC TTTTTCAAAAATGGG TERM 4385 3204089 - 3204101 + H 78 -3.3 -5.47399 | overlap 3204088 GAGCGTTGAGCGGAG CCGAA ACG TGCGG TTTTTTTGGCCTTCA TERM 4386 3204449 - 3204439 - g 72 -3.2 -5.00616 | GCGTGGCTGAAAAAA TCAC TTC GCGA GCGCAAGACTACTCG TERM 4387 3205648 - 3205638 - g 74 -6.8 -4.28487 | GAGGAGAAAACCAAA GTGG TGA CCAC CTACGAGGAACTCAA Ctha_2665 3204426 - 3205871 + | prolyl-tRNA synthetase TERM 4388 3206652 - 3206638 - g 78 -6.4 -4.59109 | GAGATTTGTCAAAAA CAACCA ATA TGGCTG GGAAGAAATCAAGTC TERM 4389 3206741 - 3206724 - g 82 -2.7 -5.52384 | gap 1 TCGTGACCAAAAAAA GCTGCGAA GTG TTCAC-GC GCATTCAAGAAAAAG Ctha_2666 3205898 - 3206803 + | methionine aminopeptidase, type I TERM 4390 3206850 - 3206867 + T 91 -8.4 -5.14563 | opp_overlap 3206850 TATGAAATCAAAAAA GCCGCT CATCAA AGCGGC TTTTTTCGTGAAACA TERM 4391 3206867 - 3206850 - T 100 -9.1 -5.40004 | opp_overlap 3206850 TATGAAATCAAAAAA GCCGCTC ATCA AAGCGGC TTTTTTCGTGAAACA Ctha_2667 3208165 - 3206924 - | Endonuclease/exonuclease/phosphatase TERM 4392 3206999 - 3206989 - G 76 -8.2 -4.04174 | GTCGATAGAAGTAAA GCCC ACT GGGC AAATTCGCGCTGTTA TERM 4393 3207187 - 3207175 - G 71 -7.7 -3.90328 | GATAATTCTGATAAA GCTGA AAA TCAGC TGGCTGCGACACGGT TERM 4394 3207948 - 3207964 + g 78 -6.5 -4.56436 | opp_overlap 3207947 3207948 AAAAGTGACAATAAT GAATCGG CTG CCGCTTC TTCTTTTATTTCCTG Ctha_2668 3208407 - 3208183 - | hypothetical protein TERM 4395 3208263 - 3208246 - G 76 -4.2 -5.0133 | TACCGGCTTAAAAAA GCAAAA TTGATT TTTTGC TTGAAAATGATATCG Ctha_2669 3210692 - 3208434 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 4396 3209017 - 3209032 + g 71 -6.8 -4.0251 | overlap 3209018 AAATCATTTACGCCA TCGCCA ATCA TGGCGG TTTGCTTGTGCTGAT TERM 4397 3209897 - 3209885 - G 86 -2.6 -5.67063 | TCGAGGAGAAAAAAA CCAG CCCTT CCGG AATCAACGAGGTGGC TERM 4398 3210167 - 3210154 - G 79 -4.5 -5.24799 | opp_overlap 3210154 CCATAAACACAAAAA CTGCC CGAT AGCAG TTTGTCGCCTGTGGA Ctha_2670 3211304 - 3210699 - | hypothetical protein Ctha_2671 3212058 - 3211414 - | peptide methionine sulfoxide reductase TERM 4399 3211478 - 3211459 - G 72 -9.4 -3.53761 | GAACTTGCTTTTAAA TTTCTCCA GCTT TGGAGAAA TCACAAAACTGCAAT TERM 4400 3212263 - 3212253 - g 72 -5.4 -4.43012 | opp_overlap 3212253 ACCTCAACATGAAAA CTGA ACT TCAG CATTTTTTTGAAGAA TERM 4401 3212608 - 3212598 - g 72 -5.4 -4.46609 | overlap 3212594 3212592 ATAAAACAACAGAAA TCCT TTC AGGA AAAAGCGCCGCGAAA TERM 4402 3212871 - 3212895 + G 78 -5 -5.00196 | opp_overlap 3212871 TTAGAAAAGAAGTAA CCAATGCTTT TCTCT ACGGCATTGG TTTTCTTATTTCAGC Ctha_2672 3212246 - 3213730 + | Alg9 family protein mannosyltransferase Ctha_2673 3213770 - 3214891 + | Glycerate kinase TERM 4403 3214924 - 3214896 - T 74 -9.6 -3.16106 | opp_overlap 3214901, overlap 3214901 TCAAAAGCTGAAAAG CAAAAGGCCGGC ATGAA ACCGGCCTTTTT ATTCAAAATGAACTT TERM 4404 3214901 - 3214919 + T 91 -8.8 -5.07486 | opp_overlap 3214901 3214896 AGCTGAAAAGCAAAA GGCCGG CATGAAA CCGGCC TTTTTATTCAAAATG TERM 4405 3214919 - 3214901 - T 88 -9.5 -4.67641 | opp_overlap 3214901, overlap 3214896 AGCTGAAAAGCAAAA GGCCGGC ATGAA ACCGGCC TTTTTATTCAAAATG Ctha_2674 3216577 - 3214946 - | hypothetical protein Ctha_2675 3219439 - 3216869 - | TonB-dependent receptor plug Ctha_2676 3220536 - 3220027 - | hypothetical protein Ctha_2677 3220749 - 3220585 - | hypothetical protein Ctha_2678 3221404 - 3220946 - | RES domain protein Ctha_2679 3221886 - 3221404 - | hypothetical protein TERM 4406 3222077 - 3222096 + r 100 -7.8 -6.02919 | opp_overlap 3222077 ATAAAACAAAAAAAA GGGAAAGC CTCA GCTTCCCC TTTTTTTCTTTATAG TERM 4407 3222096 - 3222077 - R 100 -10 -6.37666 | opp_overlap 3222077 ATAAAACAAAAAAAA GGGAAAGC CTCA GCTTCCCC TTTTTTTCTTTATAG Ctha_2680 3223091 - 3222192 - | succinyl-CoA synthetase, alpha subunit TERM 4408 3222273 - 3222254 - G 79 -8.6 -4.34263 | gap 1 TTTCAACAACATAAA TGCC-TGCG CTC CGCATGGCA GCCAGTTTATCTTCC TERM 4409 3222650 - 3222628 - G 72 -9.2 -3.5399 | overlap 3222649 ATGACACCGATAGAA CCTGGCTT GTGAATA AAGCCAGG CATAATACCGATTTT Ctha_2681 3224579 - 3223146 - | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 4410 3225398 - 3225385 - g 83 -6.7 -5.08255 | ATTCTCAAAAGAAAA TTGGC GTCG GCCAA AAACAGAAGTTGCTG Ctha_2682 3225083 - 3225988 + | undecaprenyl diphosphate synthase TERM 4411 3226296 - 3226286 - g 72 -8.2 -3.76224 | opp_overlap 3226293 GCTTCAGCGATTAAA CGCC TTT GGCG TCAGCGCCTTTTTAG TERM 4412 3226293 - 3226304 + G 80 -7.2 -4.57569 | opp_overlap 3226286 CGATTAAACGCCTTT GGCG TCAG CGCC TTTTTAGCGACATCA TERM 4413 3226652 - 3226638 - g 79 -4.2 -5.1101 | TTATCATTGAAAAAA TCACGT TTC ACGGGA ATAACGCCTTTGATG TERM 4414 3226808 - 3226820 + G 72 -9.1 -3.65314 | CGGGAAAATGGTTAT CGCGA TGC TCGCG TTGTTGAGGATTCAA TERM 4415 3227414 - 3227394 - g 87 -9.7 -4.21922 | TGATTGAAAAGCAAA CCGACACAT TCA ACGCGTCGG CAGGTTATAGCGCCT Ctha_2683 3225995 - 3228472 + | outer membrane protein assembly complex, YaeT protein Ctha_2684 3229210 - 3228476 - | Silent information regulator protein Sir2 TERM 4416 3229018 - 3229029 + g 79 -4.4 -5.22312 | GAGCCGAATTGGGTT TGCA GGTT TGCA TTTTTTCGTATCGCT TERM 4417 3229073 - 3229056 - G 74 -5.5 -4.56597 | overlap 3229058 CGCTTGGCGTAAAAA TCCAGCA CGAG CGCCGGA TTGCGCTGCCAGCCT TERM 4418 3229391 - 3229355 - R 79 -10.1 -3.53012 | overlap 3229357 3229379 TTTCTTTTGGGGAAA TAGCCCCGCAGCGCACC TCA AATACGCTGCGGAACAA CGAATAAAATTTATG TERM 4419 3229389 - 3229357 - R 95 -12.7 -3.34398 | overlap 3229355 3229379 TCTTTTGGGGAAATA GCCCCGCAGCGCACC TCA AATACGCTGCGGAAC AACGAATAAAATTTA Ctha_2685 3230913 - 3229402 - | glutamyl-tRNA synthetase TERM 4420 3230662 - 3230640 - G 77 -9.2 -3.87373 | overlap 3230642 CATATTGCTTATAAA TATCCAATCG CTC CGACTGGACA TACGGCCCAAAATCC TERM 4421 3230660 - 3230642 - G 75 -9.6 -3.5241 | overlap 3230640 TATTGCTTATAAATA TCCAATCG CTC CGACTGGA CATACGGCCCAAAAT TERM 4422 3231108 - 3231079 - R 100 -13.1 -3.71645 | opp_overlap 3231081 3231086, overlap 3231086 AAGCTGAGATCGAAA TAAAAAAGGCGTT TTTC AACGCCTTTTCTA TCTACAAAAACAGGT TERM 4423 3231101 - 3231086 - R 100 -9 -5.65927 | opp_overlap 3231081 3231086, overlap 3231079 GATCGAAATAAAAAA GGCGTT TTTC AACGCC TTTTCTATCTACAAA TERM 4424 3231086 - 3231101 + r 86 -9 -4.60797 | opp_overlap 3231086 3231079, overlap 3231081 GATCGAAATAAAAAA GGCGTT TTTC AACGCC TTTTCTATCTACAAA Ctha_2686 3231414 - 3231247 - | hypothetical protein Ctha_2687 3232041 - 3231715 - | iron-sulfur cluster assembly accessory protein Ctha_2688 3232545 - 3232129 - | FeS cluster assembly scaffold IscU Ctha_2689 3233814 - 3232585 - | cysteine desulfurase IscS Ctha_2690 3234257 - 3233859 - | transcriptional regulator, BadM/Rrf2 family TERM 4425 3234487 - 3234497 + H 86 -8.2 -4.57063 | opp_overlap 3234482 3234480 CACCATAACATTGCG GCGC AAA GCGC TTTCTTGTGTTTTGG TERM 4426 3235002 - 3235022 + G 80 -6.1 -4.78107 | GCCTCGATACGCTTG TGCTTGTTG ATC CATCAGGCA TTTTTGCTGATAATG Ctha_2691 3234626 - 3235516 + | alpha/beta hydrolase fold Ctha_2692 3235904 - 3236692 + | hypothetical protein Ctha_2693 3236762 - 3238027 + | response regulator receiver protein TERM 4427 3238450 - 3238437 - g 100 -3.9 -5.94597 | GAACATGAAAAAAAA TTTTG AAGC CAAAA AGTTATACTATACCA Ctha_2694 3238426 - 3238827 + | transcriptional regulator, MerR family Ctha_2695 3239757 - 3238834 - | dTDP-4-dehydrorhamnose reductase TERM 4428 3239878 - 3239864 - H 71 -9.2 -2.63182 | overlap 3239863 3239862 TGCAAGAAACAAATC CGACGC ATT GCGCCG CGCCTCCCTATCTTC TERM 4429 3241485 - 3241469 - g 70 -2.1 -5.0133 | overlap 3241471 GAGGTTGTGAAAAAA GTTGCGG TTT CCGAAGC CAGACAGGCAAGATT Ctha_2696 3240140 - 3241684 + | WD-40 repeat protein TERM 4430 3241729 - 3241752 + T 100 -14.6 -4.88228 | opp_overlap 3241729 GTTCTTTACAAAAAA CCCCGCCTTT TTAA AGAGGCGGGG TTTTTCATCTTAGAT TERM 4431 3241752 - 3241729 - T 100 -12.4 -5.24129 | opp_overlap 3241729 GTTCTTTACAAAAAA CCCCGCCTTT TTAA AGAGGCGGGG TTTTTCATCTTAGAT Ctha_2697 3244160 - 3241863 - | UvrD/REP helicase TERM 4432 3242827 - 3242815 - G 71 -3.3 -4.84529 | TCATAAAGCGAAAAA CCTTC CTC GATGG CAATATCTTTGAGGC TERM 4433 3243400 - 3243415 + g 79 -9 -4.08394 | ACGCAAATATTGCGA TGCTGG CCGG CCAGCA TTTTCGCAACAATGT TERM 4434 3243653 - 3243669 + g 78 -6.5 -4.60487 | TTTGGCTCATCTGTT CCGGC GTGACGA GCCGG TTTTTGGCCATGCTA TERM 4435 3243673 - 3243685 + g 73 -4.1 -4.8622 | GTGACGAGCCGGTTT TTGGC CAT GCTAA TTTTTCCTTGCACCG TERM 4436 3244060 - 3244076 + g 95 -2.9 -5.92337 | overlap 3244061 3244062 ATCATTACAGGTCCT TTGGTTG TTT CAACCGC TTTTTTTTGCTCTGT TERM 4437 3244189 - 3244201 + H 74 -9.1 -3.60971 | overlap 3244198 AAGATAACAGTCTTT CGGCA AGA TGCCG TTTAAAAATTGGCGT Ctha_2698 3244564 - 3246234 + | putative PAS/PAC sensor protein TERM 4438 3246229 - 3246217 - f 74 -5.5 -4.73388 | AAGGTTGAGGAAAAA CACAG GAA CTGCG CTTAACCAATCATTT TERM 4439 3246709 - 3246683 - g 76 -2 -5.38549 | overlap 3246685 CCTAAACAAGAAAAA CCGCCTGCTGCG CAG CATTGCCGACGG CACAAAATATTTACT TERM 4440 3247362 - 3247346 - g 74 -3.7 -4.96848 | overlap 3247349 3247354 TTTGGGAGATAAAAA CAAGC AAAGCGA GCTTG TTGGCAAACCGCTGA TERM 4441 3247581 - 3247571 - g 79 -2.4 -5.53991 | opp_overlap 3247571, overlap 3247558 CACGGAGCAAAAAAA TGCG CAC CGCC TTCTTTTGGAATCTG TERM 4442 3248694 - 3248676 - g 85 -6 -5.31877 | ACCCAGCATAAAAAA CAAGAAGC GGC GCTTATTG AAAGTGAATCGCGAT TERM 4443 3248856 - 3248837 - g 82 -5.6 -5.19328 | ACTTTATAAGAAAAA CGTGCGCG ACCT CACTCACG AGGACGATATCGAAC TERM 4444 3249120 - 3249110 - g 74 -5.4 -4.66609 | TACTTTAGTGAAAAA CTTC CCC GAAG GCCTGGTGATGGTTA TERM 4445 3250598 - 3250578 - g 71 -3.9 -4.86293 | GAACAAAAACTAAAA GCTTCGCTC GGA GAACGAGAC ACACTGTTAAAAGAA TERM 4446 3250694 - 3250680 - g 73 -4.2 -4.77757 | CTGCAAAAATCAAAA CTGCAA GAC CCGCAG GCCATCCAAATCTTT Ctha_2699 3246243 - 3251192 + | signal transduction histidine kinase Ctha_2700 3251363 - 3252907 + | multi-sensor signal transduction histidine kinase TERM 4447 3252933 - 3252973 + T 100 -13.4 -3.60006 | overlap 3252961 TGGAAAAAGCAACTG CTTCTTGACCCGTAAAGC TATAT GCTTTGCGGTTCGGGAAG TTTCCCCATCTGCTT Ctha_2701 3253483 - 3252950 - | hypothetical protein TERM 4448 3253553 - 3253586 + r 75 -3.3 -5.24129 | overlap 3253547 3253556 CATCACGGTGAATTT GCATTCCTTTTTT AACGCAGC AGAAAAGGAATTC TTTTTTATCAGCAAA TERM 4449 3253664 - 3253626 - R 100 -17 -6.02919 | opp_overlap 3253660 3253661 TGACAAACAAAAAAA GCCCTGACAAAAAATC AACGAAG GATTTCTTGTCAGGGC CCACGCCCATTGTCA Ctha_2702 3253897 - 3253691 - | hypothetical protein Ctha_2703 3254405 - 3254049 - | hypothetical protein Ctha_2704 3254843 - 3254478 - | hypothetical protein TERM 4450 3254630 - 3254620 - G 77 -6.8 -4.4195 | ATATACTTTACAAAA CTCC TAT GGAG CAAGTCGGCTAACTC Ctha_2705 3255245 - 3254943 - | hypothetical protein TERM 4451 3255300 - 3255276 - R 100 -15.1 -4.0127 | opp_overlap 3255276 AGATTGATAAGCAAA GACCTGCCTTC ATA GAAAGCAGGTC TTTTTGTTACGACTT TERM 4452 3255276 - 3255300 + r 100 -12.9 -5.08088 | opp_overlap 3255276 AGATTGATAAGCAAA GACCTGCCTTC ATA GAAAGCAGGTC TTTTTGTTACGACTT Ctha_2706 3258530 - 3255321 - | acriflavin resistance protein TERM 4453 3258149 - 3258160 + g 82 -5.8 -5.13473 | GCAATGGAAATTGCG TGCC GGGA GGCA TTTTTTCCATGTACT Ctha_2707 3259636 - 3258527 - | efflux transporter, RND family, MFP subunit Ctha_2708 3261111 - 3259675 - | outer membrane efflux protein TERM 4454 3259730 - 3259720 - G 77 -6.8 -4.46212 | GTTCCCACTATAAAA GCGA AGA TCGC TTGCGGCTATTCTGA TERM 4455 3260342 - 3260329 - G 74 -3.8 -5.07486 | opp_overlap 3260329 3260316, overlap 3260334 GATTCGCAATAAAAA GCGA AGCATG TCGC TTGCATTGCGAATGT TERM 4456 3260603 - 3260625 + g 83 -9.8 -4.08767 | CTAAACTCGTAGCCT TCAGCTGCTG CTG CTGCGGCTGA TTTTCCCCAAATAGC TERM 4457 3261077 - 3261089 + g 76 -4.9 -4.84761 | TTTTGCTTTACATGT TTTTG ATA CAAAA TTTTTGTCCCCCTGT TERM 4458 3261391 - 3261402 + H 70 -3 -5.03715 | TATGGTGTTAAGCGT TCTT TTGC AAGA TTTTTTCACGCTGAT TERM 4459 3261440 - 3261460 + H 81 -9.9 -3.78962 | opp_overlap 3261438 ACCTAATACAGGATG CGAAAATTA GTC TAATTTTCG TTTGGATGTATTTGG Ctha_2709 3261554 - 3262555 + | hypothetical protein TERM 4460 3262579 - 3262595 + F 100 -10.8 -6.04953 | GCGTACTACATTTTA GCCGGC TTCAT GCCGGC TTTTTTTATTTGTAT TERM 4461 3263085 - 3263062 - g 77 -3.8 -5.10077 | opp_overlap 3263064 3263066, overlap 3263063 3263064 3263066 AAACATGGCAAAAAA TCCATCGTGA TTAT TCACGATGTC GTCTTCGAGCTGTTC TERM 4462 3263064 - 3263083 + G 71 -10.8 -2.74701 | opp_overlap 3263063 3263062 3263064 3263066, overlap 3263066 ACATGGCAAAAAATC CATCGTGA TTAT TCACGATG TCGTCTTCGAGCTGT TERM 4463 3263083 - 3263064 - g 72 -10.8 -2.77567 | opp_overlap 3263064 3263066, overlap 3263063 3263062 3263066 ACATGGCAAAAAATC CATCGTGA TTAT TCACGATG TCGTCTTCGAGCTGT Ctha_2710 3262636 - 3263829 + | glycosyl transferase group 1 TERM 4464 3263837 - 3263856 + T 76 -5 -5.03145 | overlap 3263839 TGAAATAATAGCGCT CATTTTGC CAGT GCAAAAAG TTTTTTCAAAACTTC TERM 4465 3263868 - 3263856 - T 70 -4.9 -4.62069 | opp_overlap 3263856 TTGCCAGTGCAAAAA GTTTT TTC AAAAC TTCTGATTTGCCTTA Ctha_2711 3265851 - 3263881 - | LmbE family protein TERM 4466 3265796 - 3265769 - GT 100 -12 -5.09762 | overlap 3265771 3265785 GCGGAATAAAGAAAA GTGGATGCCGAA AAAA TCCGGCATCCGC AAAAAATCACACAAA TERM 4467 3265794 - 3265771 - GT 93 -13.2 -2.77779 | overlap 3265769 3265785 GGAATAAAGAAAAGT GGATGCCGAA AAAA TCCGGCATCC GCAAAAAATCACACA TERM 4468 3265797 - 3265785 - GT 74 -3.3 -5.03314 | overlap 3265771 3265769 TGGATGCCGAAAAAA TCCGG CAT CCGCA AAAAATCACACAAAG Ctha_2712 3266371 - 3265823 - | adenine phosphoribosyltransferase TERM 4469 3266692 - 3266720 + H 81 -3.3 -5.67063 | opp_overlap 3266701, overlap 3266701 ACACGATAAAATCCC TTATAAATAGTAA AAA TTACTCTTTGTGA TTTTTTTGTGATAAA TERM 4470 3267131 - 3267119 - g 72 -6.3 -4.26076 | opp_overlap 3267119 3267118 TTACTTTTAGGAAAA GAGAT TCA ATCTC GTTCTGTGCTTTCCC Ctha_2713 3266810 - 3267214 + | hypothetical protein TERM 4471 3267579 - 3267591 + G 79 -9.1 -4.15044 | TTGGAATGTTGAAGC CTGCG GCA CGCAG TTTATTCAAGAAAGA TERM 4472 3267890 - 3267874 - g 70 -2.3 -4.97402 | opp_overlap 3267874 GAAAATGCAGAAAAA TTGTC CTTTGCT GACAA TTCTTTTGACATTGT Ctha_2714 3267526 - 3268446 + | Methyltransferase type 11 Ctha_2715 3268433 - 3268555 + | hypothetical protein TERM 4473 3269040 - 3269030 - g 71 -6.8 -4.07306 | AGATTTAATTATAAA GGCA TTT TGCC GGATGAGCTTGTCGT Ctha_2716 3268565 - 3269695 + | glycosyl transferase group 1 TERM 4474 3270182 - 3270161 - g 78 -5.8 -4.91109 | opp_overlap 3270163 GTTTGATGAGAAAAA CGGCGC GGTGAGCTTT GCGCCG AGTCTTGCCAAAAGT TERM 4475 3270380 - 3270368 - g 72 -4.8 -4.57569 | opp_overlap 3270368 CGATTTGGCGAAAAA TGCG GACGG CGCA GTTGATTTTGAAAAC TERM 4476 3270809 - 3270826 + G 72 -6.3 -4.2717 | gap 1 CGAAATCACGATTTG CT-CGGTC AAA GACCGGAG TTTTGATAGCATCGT Ctha_2717 3269937 - 3271625 + | extracellular solute-binding protein family 5 Ctha_2718 3271748 - 3272224 + | 2-vinyl bacteriochlorophyllide hydratase TERM 4477 3272403 - 3272389 - g 79 -4.2 -5.15969 | overlap 3272399 CGGGAACGGAAAAAA TGCTGT TAA ACGGCA GGCTGCCGTCCATGC TERM 4478 3272411 - 3272399 - g 72 -9.1 -3.5771 | overlap 3272389 AAAAATGCTGTTAAA CGGCA GGC TGCCG TCCATGCAAATGACG Ctha_2719 3272256 - 3273221 + | chlorophyll synthesis pathway, BchC TERM 4479 3273406 - 3273422 + F 73 -8.1 -3.68757 | TAAGAAGGTTCAGCA TGACAAA GTT TTTGTCA TTATATAGTTTTGAG TERM 4480 3273986 - 3273970 - g 74 -8.1 -3.90744 | opp_overlap 3273969 3273967 3273970 3273972 TTTTGCCGCAAATAA TATTTGC CTT GCAAATA ATTATTTCAACGCCT Ctha_2720 3273461 - 3274696 + | chlorophyllide reductase iron protein subunit X Ctha_2721 3274881 - 3275486 + | transcriptional regulator, TetR family TERM 4481 3276068 - 3276052 - g 74 -7.3 -4.23674 | TGTGACGAAGATAAA TGTCCAA CCG TCGGACA ATGTGGAAAAAGAAG TERM 4482 3276155 - 3276145 - g 71 -6.8 -4.08767 | opp_overlap 3276145 TTTAGTTCCCGAAAA GCAC ATT GTGC TTTATGAAGTTGGGC Ctha_2722 3275537 - 3276565 + | efflux transporter, RND family, MFP subunit TERM 4483 3278754 - 3278779 + G 72 -3.1 -4.93877 | overlap 3278759 CCGTGTCTTCGATCG GCGGGTCGGAG CAAG CGCCGATTCTC TTTTATTTGATGGGA TERM 4484 3279512 - 3279492 - g 72 -4.7 -4.63928 | ACATCACGGGAAAAA GCATGAATA TTA TTTCCATGC TCTCGATTGTGATGC Ctha_2723 3276767 - 3279841 + | acriflavin resistance protein TERM 4485 3280004 - 3279992 - g 71 -7.7 -3.99819 | opp_overlap 3279991 3279992 AATAAAGACATCAAA CTTGC CAA GCAAG ATTTAGCGGTTGCTG Ctha_2724 3279872 - 3281182 + | outer membrane efflux protein TERM 4486 3281216 - 3281246 + T 100 -10.5 -5.78622 | opp_overlap 3281216 3281215 3281220 CCTGAATACATTAAG CAAAGCCGGTG CAGTCAAAT CGCCGGCTTTG TTTTTTTTACCCTCC TERM 4487 3281372 - 3281329 - T 83 -8.8 -4.25104 | opp_overlap 3281333, overlap 3281330 3281332 GCGGCCTGAGCAAAA GCACCGAGCCCTTCCGCCAT CAAT AAGACGAAAGGGCTCGTTAT GATTTTCAATTTATG TERM 4488 3281371 - 3281330 - T 87 -12.3 -3.14848 | opp_overlap 3281333, overlap 3281329 3281332 CGGCCTGAGCAAAAG CACCGAGCCCTTCCGCCAT CAAT AAGACGAAAGGGCTCGTTA TGATTTTCAATTTAT TERM 4489 3281369 - 3281332 - T 91 -12.7 -3.13504 | opp_overlap 3281333, overlap 3281330 3281329 GCCTGAGCAAAAGCA CCGAGCCCTTCCGCCAT CAAT AAGACGAAAGGGCTCGT TATGATTTTCAATTT TERM 4490 3281333 - 3281368 + T 85 -11.8 -3.70033 | opp_overlap 3281332 3281330 3281329 CCTGAGCAAAAGCAC CGAGCCCTTCCGCCAT CAAT AAGACGAAAGGGCTCG TTATGATTTTCAATT Ctha_2725 3283730 - 3281433 - | TonB-dependent receptor TERM 4491 3282097 - 3282081 - G 87 -10.9 -4.00526 | AACGGTATAATCAAA TGAGCTG CTC CAGCTCA GAGAACGCTCTTCCT TERM 4492 3282376 - 3282366 - G 75 -3.2 -5.24531 | opp_overlap 3282372 ATCTTGGACAAAAAA GCCA TAT TGAC GAATGTATTGGTCAA TERM 4493 3283779 - 3283765 - R 73 -7.2 -4.0616 | opp_overlap 3283765 3283764 GATTTGAATTATAAA TTAGAC TTT GTCTAA ATTATCATCATACAT Ctha_2726 3287274 - 3283939 - | PAS/PAC sensor hybrid histidine kinase TERM 4494 3284699 - 3284729 + g 73 -10.6 -3.05384 | overlap 3284701 3284703 TGGACGGCATTGGTG CACAGATTCATAAG CAC TTGATGAATCTGTG TTGCATCACCCAAAA TERM 4495 3285338 - 3285356 + g 71 -3.8 -4.76088 | TGCTCACCAATAACA TCGCGTAT GGT ATGCCCGA TTATTTTTTCATTTG TERM 4496 3287376 - 3287392 + r 71 -9.5 -2.57132 | overlap 3287375 GTCGACGGGCTTGAG CGTCTTA TGC TAAGACG ATTATACACAAAAAC Ctha_2727 3287899 - 3287597 - | protein of unknown function DUF77 Ctha_2728 3289452 - 3288172 - | glycosyl transferase group 1 TERM 4497 3288942 - 3288931 - G 73 -4.4 -4.7497 | TTGATTGAGCAAAAA TTGC TCGA GCAA TCGATAGGAAGAATA TERM 4498 3289226 - 3289248 + g 73 -4 -4.8622 | overlap 3289234 AGCTTCACCCGATAA TTTGGGCGCG GCG CGAGGCCGAA TTTTTCCTTGAGCAG Ctha_2729 3290206 - 3289586 - | phosphoesterase PA-phosphatase related TERM 4499 3290294 - 3290308 + r 84 -4.2 -5.63517 | overlap 3290296 AATGAGTGAAAATGG TGGCGG CCT TCGCTA TTTTTTCTTTCGCGC Ctha_2730 3292066 - 3290306 - | 60 kDa inner membrane insertion protein TERM 4500 3290855 - 3290871 + g 86 -4.3 -5.52986 | overlap 3290856 AATGGCTTTCAATTG CGGTTGC AAC GCAGCCA TTTTTTTCATGGACT TERM 4501 3290856 - 3290870 + g 71 -7.8 -3.90707 | overlap 3290855 ATGGCTTTCAATTGC GGTTGC AAC GCAGCC ATTTTTTTCATGGAC TERM 4502 3291818 - 3291828 + g 79 -4 -5.13722 | AGTGAAAAGATCGGT TTCA ATT TGAA TTTTCTTTTCCTCAC TERM 4503 3292090 - 3292100 + r 78 -3.2 -5.42198 | ATTGATTTAAAAATC TTCG GGT CGGA TTTTGTTTTTTGAAG Ctha_2731 3292344 - 3292081 - | protein of unknown function DUF37 Ctha_2732 3292815 - 3292348 - | ribonuclease P protein component TERM 4504 3292705 - 3292692 - G 70 -2.3 -5.04249 | CCTTTAAAAAAGAAA CCCGA ACCG TCGCG CCATTTGTATAAACT Ctha_2733 3292995 - 3292837 - | ribosomal protein L34