TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.450872 %AT, 4164268 nt, 38355 terms. Intergenic: 0.541125 %AT, H2T: 605784 nt, 3935 terms; T2T: 203674 nt, 3176 terms; H2H: 296321 nt, 2632 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|157144296|ref|NC_009792.1| Citrobacter koseri ATCC BAA-895, complete genome (length 4720462) CKO_00001 833 - 2143 + | hypothetical protein TERM 1 2155 - 2172 + GF 100 -8.3 -5.26316 | opp_overlap 2147, overlap 2156 GTAATTACCCGTCTC CGGCCCG CTCG CGGGCCA TTTTTTATGGCATCA TERM 2 2156 - 2171 + GF 93 -11.8 -3.75067 | opp_overlap 2147, overlap 2155 TAATTACCCGTCTCC GGCCCG CTCG CGGGCC ATTTTTTATGGCATC CKO_00002 2064 - 2309 + | hypothetical protein CKO_00003 2198 - 3100 + | hypothetical protein CKO_00004 3087 - 3701 + | hypothetical protein TERM 3 3724 - 3706 - T 100 -13.1 -5.52023 | AGCAGCAATAAAAAA GCCCGGC GCCAG GCCGGGC AAAACGTTACCAATA TERM 4 3746 - 3767 + T 82 -3.1 -5.60993 | gap 1, opp_overlap 3749, overlap 3747 3749 TTACCAATACACACT TA-AGCGACT TTC AGTTGCTGTA TTTTTTTCTCACGGC CKO_00005 5136 - 3745 - | sugar phosphate antiporter CKO_00006 6609 - 5281 - | regulatory protein UhpC TERM 5 6035 - 6015 - G 82 -5.3 -5.00895 | overlap 6016 6027 GCCAGCAGAGAAAAA TGCCGACGA TAA TCGCCAGCG TTCCGGCAATCATCA CKO_00007 8121 - 6619 - | sensory histidine kinase UhpB CKO_00008 8792 - 8121 - | DNA-binding transcriptional activator UhpA TERM 6 8547 - 8520 - G 74 -9.8 -3.68341 | AAGCTGACTTAATAA CTCCAGCCCGGA GATA TCCGGCATGGAG ATATCGCAGATGCAG TERM 7 8823 - 8801 - R 87 -9.9 -4.20516 | overlap 8820 CGGCCATCCAACAAA GCGCTTACC TTAAC GATAAGCGC ATGGCTGTTCAAGCC CKO_00009 9880 - 8879 - | hypothetical protein CKO_00010 10048 - 9884 - | hypothetical protein TERM 8 10122 - 10095 - R 100 -15 -3.61652 | opp_overlap 10103, overlap 10091 10096 CTCTCAAATAATTAA CCTGAACAAGGG TTTC CCCTTGTTCAGA TAGCCATTATTACTC TERM 9 10121 - 10096 - R 93 -16.3 -2.76509 | opp_overlap 10103, overlap 10095 10091 TCTCAAATAATTAAC CTGAACAAGGG TTTC CCCTTGTTCAG ATAGCCATTATTACT CKO_00011 10422 - 10132 - | acetolactate synthase 1 regulatory subunit CKO_00013 12120 - 10426 - | acetolactate synthase catalytic subunit TERM 10 10656 - 10670 + gH 72 -6.4 -4.2704 | opp_overlap 10648 10669 CAGCAAACACGCCCT GCTTGT AGA ACAGGC TTTGTTGCTGATGCA TERM 11 11430 - 11443 + gH 71 -9.5 -3.14132 | CCGCCAGTTCACGCA CGCGC GCAG GCGCG TTAATCACGCCGCCG TERM 12 11533 - 11543 + gH 74 -2.4 -5.00616 | overlap 11519 CTCAGCGCTGAATTC CGGC GCC GCCA TTTTTTCAGCCGGAG TERM 13 12200 - 12176 - gR 100 -10.7 -4.98531 | gap 1, opp_overlap 12176 GTCTTAAACGAAAAA CCCCGCCCGG TTTGCG CCG-GCGGGG TTTTGGAATCGTGTG TERM 14 12176 - 12200 + Gr 89 -11.4 -4.16279 | gap 1, opp_overlap 12176 GTCTTAAACGAAAAA CCCCGCCCGGT TTGC GCCG-GCGGGG TTTTGGAATCGTGTG TERM 15 12272 - 12289 + Gr 80 -6.3 -4.7373 | gap 1 CACGCACGACGACCA CTGCGGCA GGT TGC-GCAG TTTTTAGTAGGGTCG TERM 16 12452 - 12417 - gR 77 -4.6 -4.84359 | gap 1, opp_overlap 12418, overlap 12418 TCATCTGCACAAAAA TGCGTCGACGATCACGC TTT GCCAGAT-GCCGACGCT GGCCTGCAAAACAAA TERM 17 12471 - 12486 + Gr 83 -6 -4.8543 | opp_overlap 12471 CTGCAAAACAAAAAA CCCCGC CGGA GCGAGG TTTTTATCAGCGTTA TERM 18 12486 - 12471 - gR 100 -8.2 -5.79595 | opp_overlap 12471 CTGCAAAACAAAAAA CCCCGC CGGA GCGAGG TTTTTATCAGCGTTA CKO_00012 12104 - 12691 + | hypothetical protein CKO_00014 13018 - 12839 - | hypothetical protein TERM 19 12969 - 12990 + g 100 -17.3 -3.82218 | opp_overlap 12969 12958 TCAAGCCGCACCGAA GGGGAGCGG GCAA CCGCTCCCC TTTCATCATCTGCCT TERM 20 12990 - 12969 - G 100 -17.3 -3.06831 | opp_overlap 12969, overlap 12958 TCAAGCCGCACCGAA GGGGAGCGG GCAA CCGCTCCCC TTTCATCATCTGCCT CKO_00015 13066 - 13899 + | hypothetical protein TERM 21 13975 - 13994 + G 100 -7.8 -5.31519 | overlap 13976 CGGTAAAATAATCTC TCGGCAAC AATT GTTGCCGC TTTTTGTTTACATAT TERM 22 13976 - 13993 + G 82 -11.3 -3.77285 | overlap 13975 GGTAAAATAATCTCT CGGCAAC AATT GTTGCCG CTTTTTGTTTACATA CKO_00016 13907 - 14044 + | hypothetical protein CKO_00018 16339 - 15257 - | hypothetical protein CKO_00017 14146 - 15330 + | multidrug resistance protein D TERM 23 15341 - 15359 + gT 83 -9.5 -4.13767 | TTTAATCGAATGATG GCCCGGT TTCCC GCCGGGC TTTTCACATACCGGC TERM 24 15408 - 15420 + gT 72 -10.5 -2.78073 | overlap 15407 AGCGGCTCCAGCGCC GGGCG CCA CGCCC CTTCTTCCCCGTCAT TERM 25 15573 - 15585 + gT 91 -6.9 -5.14563 | opp_overlap 15573 CAGCCGCCAACCCAA CTGGC ATG GCCGG TTTTTTGCTGCCAGC TERM 26 15824 - 15799 - GT 72 -2.6 -4.83615 | gap 1 GAGGCGCGACAAAAA TCATGCG-TTG GGGGT CAATCGCGTGA AGGGTGCGGATGGTT CKO_00019 17427 - 16408 - | DNA-binding transcriptional regulator DsdC TERM 27 17169 - 17152 - G 71 -7.7 -3.97368 | opp_overlap 17151 17154 GTGCGAACGGACAAA GAGCTGA ATCC CCAGCTC CTCTTCCAGTTGATT TERM 28 17652 - 17671 + G 71 -4.2 -4.55295 | gap 1 AGATTCCACCCGTTT CTGGCACTG CTG CTG-GCCAG TTTCTTTGTGGGCGC TERM 29 18457 - 18427 - g 76 -12.6 -2.78384 | overlap 18406 GCCTGCGTCAGCATA TCGGTATGGGTACG TTG CTGACCCATACCGA AAACGGCTTTGGCTC CKO_00020 17562 - 18899 + | permease DsdX TERM 30 19140 - 19125 - g 81 -11.8 -3.53343 | opp_overlap 19124 19123 AAGCCTTCCCGGAAA CCGCCG CAAC CGGCGG GATTATTGAGTCTGA CKO_00021 18917 - 20245 + | D-serine dehydratase CKO_00022 21274 - 20258 - | hypothetical protein CKO_00023 21729 - 21367 - | hypothetical protein CKO_00024 22066 - 21719 - | hypothetical protein CKO_00025 23668 - 22175 - | hypothetical protein TERM 31 22966 - 22993 + g 71 -6.3 -4.24342 | gap 1 CCGGAGACGGCATCG CCTGCGC-CCAT AGCCG ATGGTGCTCAGG TTTATTGCTCAGCGA TERM 32 23506 - 23494 - G 75 -6.2 -4.62904 | overlap 23496 AAATACCGGTAAAAA GCCC CGCGC GGGC TGGCGTACACACCGG CKO_00026 25401 - 23665 - | putative symporter YidK TERM 33 23762 - 23748 - G 71 -7.8 -3.99347 | overlap 23749 AAATCAGGTAAACAA CCACCG CAG CGGTGA TGGCGTAGCTGAGAA TERM 34 24353 - 24341 - G 76 -3.3 -5.02074 | overlap 24342 24350 GCACTGTTCAAAAAA CCGCA GAA TGCGC TGATAATCGCGCCAA TERM 35 24400 - 24388 - G 74 -2.6 -5.0133 | overlap 24396 TACCGCGCTAAAAAA GCCA ATCAG CGGC AGCGGCATCACTTTG TERM 36 26436 - 26400 - g 89 -13.7 -3.53012 | opp_overlap 26400 26399, overlap 26402 TCGGCGGTGTTGAAA CATCCTGACCGGCACCC GCT GGATGCCGGTCAACAAG ATTAGTGCAGTTCAG TERM 37 26434 - 26402 - g 95 -14.9 -3.34398 | opp_overlap 26400 26399, overlap 26400 GGCGGTGTTGAAACA TCCTGACCGGCACCC GCT GGATGCCGGTCAACA AGATTAGTGCAGTTC CKO_00027 25440 - 26441 + | hypothetical protein CKO_00028 27760 - 26438 - | hypothetical protein CKO_00029 29499 - 27757 - | hypothetical protein TERM 38 28048 - 28061 + g 71 -9.5 -3.58726 | overlap 28042 28054 CCCAAGTTTTGCGTC CGGCG CGGG CGCCG TTGTCTGTCCACGCG TERM 39 28950 - 28973 + g 76 -3.2 -5.06414 | gap 1, opp_overlap 28960, overlap 28960 CCGAAATCATAATGG CGC-CGATA ATGCTGG TATCGAGCG TTTTTATTCCGGCCA TERM 40 29057 - 29045 - G 91 -7.7 -5.03314 | opp_overlap 29054 TCCACGCCGAAAAAA TGACC CCA GGTCA TGCCCATGGCATTAA CKO_00030 29599 - 30321 + | hypothetical protein CKO_00031 31979 - 30318 - | hypothetical protein TERM 41 30870 - 30884 + g 78 -5.7 -4.73388 | opp_overlap 30869 AAACACCGGTAACAT CTGCA CCTGT TGCAG TTTTTGCTGGGCGTT TERM 42 32063 - 32088 + G 80 -8.9 -4.15222 | opp_overlap 32055 32064 32065, overlap 32064 TGGTAAAGCACAAAA ATGCCCCGTCA TTGC TGGCGGGGCGG TTTGTTGAAAAGCAT TERM 43 32064 - 32087 + G 76 -12.4 -3.08812 | opp_overlap 32055 32064 32065, overlap 32063 GGTAAAGCACAAAAA TGCCCCGTCA TTGC TGGCGGGGCG GTTTGTTGAAAAGCA TERM 44 32087 - 32064 - g 95 -8 -5.04325 | opp_overlap 32064 32063, overlap 32055 32065 GGTAAAGCACAAAAA TGCCCCGTCA TTGC TGGCGGGGCG GTTTGTTGAAAAGCA TERM 45 32086 - 32065 - g 77 -11.5 -3.6151 | opp_overlap 32064 32063, overlap 32055 32064 GTAAAGCACAAAAAT GCCCCGTCA TTGC TGGCGGGGC GGTTTGTTGAAAAGC TERM 46 32102 - 32131 + G 71 -8.5 -3.86015 | opp_overlap 32103, overlap 32103 GGTTTGTTGAAAAGC ATGATGCCGGACC TACA GGTTCGGCGTCGC TTTGTAGGCCCGGTA TERM 47 32103 - 32130 + G 75 -12 -2.91395 | opp_overlap 32103, overlap 32102 GTTTGTTGAAAAGCA TGATGCCGGACC TACA GGTTCGGCGTCG CTTTGTAGGCCCGGT CKO_00032 32047 - 32217 + | hypothetical protein CKO_00033 32642 - 32214 - | heat shock chaperone IbpB TERM 48 32511 - 32524 + g 79 -3.1 -5.17054 | GAGGGTAATGCGGTA GTGGT TGTC ATCAC TTTTTTCAATGTTAT TERM 49 32748 - 32728 - R 93 -14.7 -3.31792 | opp_overlap 32746 32747 CGAGCACGGGGATAA CAGGCCGCC GAC GGCGACCTG ACTGAATCAGTTAAT CKO_00034 33168 - 32755 - | heat shock protein IbpA CKO_00035 33213 - 33371 + | hypothetical protein CKO_00037 33566 - 33429 - | hypothetical protein CKO_00036 33475 - 33807 + | hypothetical protein CKO_00038 35077 - 33809 - | hypothetical protein TERM 50 33909 - 33895 - G 76 -3.4 -5.0133 | opp_overlap 33902 CATCCGGCGAAAAAA CAACGG CGT CCGCGG AAGGCGGGCTGTCAT TERM 51 34152 - 34133 - G 70 -2.8 -4.7254 | gap 1, overlap 34110 ATCGCGCATCAAAAA CGCAATGTC CGT GGC-TTGCG GGTTACTCCGCACCC TERM 52 34967 - 34957 - G 81 -6.8 -4.81551 | opp_overlap 34964, overlap 34958 GACGCACATCAAAAA CCAG CCA CTGG CTGTCCGCCGTCCAG TERM 53 35069 - 35043 - G 81 -13.8 -2.91264 | TGTTTCATGGAGATA CCCTGATGCG CGGTTTT CGCATCAGGG TATAGCATTGGAAGA TERM 54 35933 - 35917 - g 85 -4.3 -5.15969 | overlap 35918 CCTGAAGGGAAAAAA TCCACAG CAC CTGCGGT ACAAGAAGCTCTGCG TERM 55 36124 - 36107 - g 73 -5.5 -4.58663 | ATCACGCGTCAAAAA GTATCGG CGTA CCGTTAC ACATAGAAGATCTCG CKO_00039 35371 - 36249 + | hypothetical protein TERM 56 36521 - 36496 - g 74 -4.5 -4.77567 | AGCGGCAGAAGAAAA GCAGCAGGCTG AGGA CAGGCAGCAGC GTCCTGTCACTGAAG CKO_00040 36257 - 37045 + | hypothetical protein TERM 57 37154 - 37126 - Tf 70 -2.5 -5.00616 | overlap 37146 CTGCTGTCGAAAAAA TCAAGAAAACGTC AGA GAAGTTTTATTAA AAAAATAAACAAAGA CKO_00043 39610 - 39380 - | hypothetical protein CKO_00041 37210 - 39471 + | hypothetical protein TERM 58 39552 - 39541 - Gg 74 -3 -4.90266 | opp_overlap 39541 TGCAGGAACGAAAAA TGAA TATT TTCA CTTTATCCAAAGCAC TERM 59 39740 - 39722 - gR 70 -3 -4.74801 | opp_overlap 39686 TAATGCCAGTAAAAA GGTGTTTG CAG CAGTCACC GATCGTGTAAATCGT TERM 60 40206 - 40192 - gR 79 -2.8 -5.1675 | overlap 40205 CGATGGATGAAAAAA CACAGA AAA TCTACG TTGGCGGAAGAGATT CKO_00042 39471 - 40715 + | hypothetical protein TERM 61 40763 - 40710 - TR 74 -11.1 -2.78992 | overlap 40709 40758 40760 ATTGATTTGAATAAG TCG-TGATCGGACCGTTCCCCCGTC AAACTG GCCGGGGGAACGG-CAAACCAGCGA AGTACTGTAGTCCGC CKO_00044 41641 - 40829 - | sugar phosphatase TERM 62 41548 - 41562 + g 89 -9.2 -4.57073 | overlap 41560 CGCCACGGGCGCGCG CGGCGG CAA TCGCCG TTTTTACCGCAGGTG TERM 63 41739 - 41722 - R 73 -7.7 -4.05322 | opp_overlap 41722 AAAGGGGGATAGAAA GGGGAAC CAGG ATTCCCC TTTTGCAGATCGGTT TERM 64 41722 - 41739 + r 71 -7 -4.1196 | opp_overlap 41722 AAAGGGGGATAGAAA GGGGAA CCAGGA TTCCCC TTTTGCAGATCGGTT CKO_00045 44267 - 41853 - | DNA gyrase subunit B TERM 65 41925 - 41898 - G 71 -8.4 -3.85698 | gap 1, overlap 41899 GTTCTCTTCGATAAA GGCGCGACGCGGT TCA ACGGCATCGC-CC ATCAGCGTAGTGAAC CKO_00046 45369 - 44296 - | recombination protein F TERM 66 44872 - 44890 + g 72 -12.4 -2.70932 | ATAACGGCTTACCTG GCGCAGCG CCG CGTTGCGC TGCTTGAGCAACCGC TERM 67 45017 - 45007 - G 77 -8.2 -4.10552 | GTTGAGTAAAGTAAA CCCC TCA GGGG TAATCAACTGCATCG TERM 68 45236 - 45217 - G 86 -12.8 -3.63968 | CTGCAAACTGCGAAA CGCCCGGC CGTG GCCGAGCG TATAGATGGCCTCCA CKO_00047 46469 - 45369 - | DNA polymerase III subunit beta TERM 69 45696 - 45706 + g 75 -6.8 -4.40572 | GAGAATATCGCAACC CGCT TCC AGCG TTTTGTCCGGGTTCT TERM 70 46408 - 46385 - G 70 -9.6 -3.36327 | gap 1, opp_overlap 46402 GCAGGTTACCGAGAA TGGGCAG-CGT AGG ACGACCGCCCA GCGGGCCACTGACCT TERM 71 46402 - 46433 + g 81 -8.6 -4.30809 | gap 1, opp_overlap 46385 GGCAGCGTAGGACGA CCGC-CCAGCGGGCC ACT GACCTGCTGAAGCGG TTTTAATAAATGTTC CKO_00048 47808 - 46474 - | hypothetical protein TERM 72 47402 - 47442 + g 74 -9.7 -3.75153 | gap 1, overlap 47406 GCGCCGCCGGGGTTG TCC-GCCACCTGACGCGC CGCCGC GCGCGCCAGTTGGTTGGA TTTACCTTCGACGAA TERM 73 47406 - 47437 + g 74 -11.5 -3.30781 | overlap 47402 CGCCGGGGTTGTCCG CCACCTGACGCGC CGCCGC GCGCGCCAGTTGG TTGGATTTACCTTCG TERM 74 47561 - 47599 + g 76 -10.2 -3.61894 | overlap 47584 GCTGGCACCGCACGC TGTGGCTGCGCCTGAGCG ACC TGCGCAGGTGCAACAACA TTGTTGACCGGCGTT TERM 75 47584 - 47612 + g 77 -8.2 -4.17089 | gap 1, overlap 47561 47611 CGCCTGAGCGACCTG CGCAGGTGCAACA ACAT TGTTG-ACCGGCG TTTTGAGCGTTTGAG CKO_00049 48283 - 48137 - | hypothetical protein TERM 76 48653 - 48632 - H 71 -3.7 -4.78572 | gap 1, overlap 48633 48634 TTCCAAGTAATAAAA GC-TAACCCC TGA GTGGTTAAGC TCGCATTTCCCAGGG TERM 77 48828 - 48808 - g 74 -2.6 -5.06414 | gap 1 CGTCGCCAAGAAAAA CGTTCGACG CGCG CAT-GAACG CAATCGGATTAAACG CKO_00050 48644 - 49003 + | ribonuclease P TERM 78 49732 - 49717 - g 77 -7.6 -4.26344 | ACACCTTCACCAAAA CGTTTG TCCT CAAACG CGGTGAATATGCGGT CKO_00051 49227 - 50873 + | putative inner membrane protein translocase component YidC TERM 79 50909 - 50884 - f 70 -9.7 -3.06796 | gap 1 CCTGATTCCATGTAA GCCGGGTAAGCA TAG CGCC-ACCCGGC AATCAGAACAGCGAT TERM 80 50930 - 50947 + F 100 -12.7 -5.4505 | opp_overlap 50929 GAACAGCGATGACAG GGCGGTC AATT GACCGCC TTTTTTATTAGCAAA TERM 81 51272 - 51304 + G 71 -10.6 -3.28712 | overlap 51299 51300 AAACGTATTCTGACG CTC-CCCGGCCTGCGC ATT GC-CAGACCGGGCGAG TTCTCCGAGCGCGCG CKO_00052 50939 - 52339 + | tRNA modification GTPase TrmE TERM 82 52441 - 52427 - g 79 -7.2 -4.44667 | TCCGGCAATAATAAA TTTCCT CAC AGGAAA TCACCGTTGTCCAAA CKO_00053 52329 - 52523 + | hypothetical protein CKO_00054 52520 - 53692 + | multidrug efflux system protein MdtL TERM 83 53947 - 53925 - gf 71 -7.6 -3.86015 | overlap 53912 CAGCTGCTTGATAAA CCGCATCACG AAT CGCCACGCGG CCTGAAATTTGAACT CKO_00055 53661 - 54620 + | DNA-binding transcriptional regulator YidZ CKO_00056 54915 - 55520 + | hypothetical protein CKO_00057 55561 - 56127 + | hypothetical protein CKO_00058 56252 - 56109 - | hypothetical protein CKO_00059 57590 - 56253 - | hypothetical protein TERM 84 57469 - 57455 - G 84 -5.7 -5.06414 | GCGGGTTAACAAAAA CGATG TAAAC CATCG TCAGGAAGGTGGTAA CKO_00060 57755 - 58420 + | 6-phosphogluconate phosphatase TERM 85 58462 - 58442 - T 77 -9 -3.9941 | overlap 58437 GGCCTGATAAGCAAA GCGCCATC AGGCG AATGGCGC AGAATGCCGGATGCG TERM 86 58497 - 58467 - T 79 -11 -3.31322 | opp_overlap 58477, overlap 58468 GCGAATGGCGCAGAA TGCCGGATGCGGCG TAA CGCCTTATCCGGCC CACAATAGCGACGCC TERM 87 58496 - 58468 - T 86 -14.5 -2.58579 | opp_overlap 58477, overlap 58467 CGAATGGCGCAGAAT GCCGGATGCGGCG TAA CGCCTTATCCGGC CCACAATAGCGACGC TERM 88 58531 - 58505 - T 77 -11.5 -3.21395 | gap 1, overlap 58503 ATCCGGCCCACAATA GCG-ACGCCGGG GGAT CCCGGCGAACGC AACAAGCCGCTTATT CKO_00061 59267 - 58542 - | transcriptional regulator PhoU CKO_00062 60054 - 59281 - | phosphate transporter subunit CKO_00063 61055 - 60165 - | phosphate transporter permease subunit CKO_00064 62014 - 61055 - | phosphate transporter permease subunit TERM 89 61959 - 61930 - G 77 -11.5 -3.53933 | gap 1, opp_overlap 61929 ACATCAATAGCACAA TCAGCGCAGCCAGT TTT ACCAGC-GCGCTGA ATATCATGTCACCCT TERM 90 62118 - 62089 - R 77 -9.3 -3.86015 | opp_overlap 62111 62112 TATCCGGCCTACAAA TCGGGCCTACAGT CGGA ACTGTAGGGCGGA TAAGCGTAGCGCCAT CKO_00065 63229 - 62159 - | phosphate transporter subunit TERM 91 62912 - 62935 + g 81 -6.7 -4.72272 | AATGACGGTCGGGAA CTGGAACAG ACCTTC CTGCTCCAG TTTTTCATCAGACAA TERM 92 63509 - 63490 - R 100 -11.4 -5.626 | CAGCGCAGAAAAAAA TGCCCCGC TTTC GCAGGGCA TCGTCACGATTACTC CKO_00066 65348 - 63519 - | D-fructose-6-phosphate amidotransferase TERM 93 64535 - 64551 + g 72 -3.7 -4.74801 | overlap 64530 CTTCACCGTGGCTGA TACGC CCGGTCA GCGTA TTTTTAATCGCATTC CKO_00067 67083 - 65713 - | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 94 66323 - 66308 - G 77 -8.2 -4.13767 | overlap 66309 CCGCGCAGGTCAAAA CGCGCG GGAT CGCGCA GCATCACACCGGCCA TERM 95 67373 - 67354 - gR 100 -10 -6.11644 | opp_overlap 67354 TCAGGCAAAAAAAAA CCAGCCTG ATTT CAGACTGG TTTTGATGCTTTCAA TERM 96 67354 - 67373 + Gr 79 -7.8 -4.39386 | opp_overlap 67354 TCAGGCAAAAAAAAA CCAGCCTG ATTT CAGACTGG TTTTGATGCTTTCAA CKO_00069 67815 - 67396 - | F0F1 ATP synthase subunit epsilon CKO_00068 67307 - 67468 + | hypothetical protein CKO_00070 69218 - 67836 - | F0F1 ATP synthase subunit beta CKO_00071 70108 - 69245 - | F0F1 ATP synthase subunit gamma TERM 97 69933 - 69966 + g 79 -12.5 -2.91264 | opp_overlap 69933, overlap 69944 TTATATTCCAGATTA CCGTTCGCAAGGTGA CCAA TCACTTTGCGCATGG TATCTGCATAAGGAC CKO_00073 71700 - 70159 - | F0F1 ATP synthase subunit alpha CKO_00075 72246 - 71713 - | F0F1 ATP synthase subunit delta CKO_00072 70249 - 71847 + | hypothetical protein CKO_00076 72731 - 72261 - | F0F1 ATP synthase subunit B CKO_00074 71953 - 72480 + | hypothetical protein CKO_00077 73030 - 72791 - | F0F1 ATP synthase subunit C CKO_00078 73893 - 73078 - | F0F1 ATP synthase subunit A TERM 98 73580 - 73560 - G 74 -11.1 -3.17051 | overlap 73558 GGTTCATCAGGAATA CCCAGACGA AGA TCGTCAGGG CCAGCGGCGCAATCA CKO_00079 74282 - 73902 - | F0F1 ATP synthase subunit I TERM 99 74579 - 74591 + r 70 -4.8 -4.53036 | opp_overlap 74586, overlap 74586 AGTATTTATTTACTT GGCA AATGA TGCC TTTTCATCTTTCTGA TERM 100 74785 - 74773 - R 73 -7.7 -4.16307 | TTTTTAATAAAAAGA GCTAC GTT GTAGC AATGATACAAAACGG CKO_00080 75521 - 74898 - | glucose-inhibited division protein B CKO_00081 77513 - 75624 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA CKO_00082 78335 - 77886 - | flavodoxin TERM 101 78430 - 78419 - R 87 -7.2 -5.14563 | TGTGGGATTAAAAAA GCCG ATCA CGGC CGGATAGTACGCATG CKO_00083 78882 - 78424 - | DNA-binding transcriptional regulator AsnC TERM 102 78627 - 78650 + g 78 -6.6 -4.63527 | TTTCGAGCTTCGCCA GCGCGGATGG GTAG TCTTTCGCGC TTTTTAAAATAATGC CKO_00084 78974 - 80026 + | asparagine synthetase AsnA CKO_00085 81482 - 80031 - | hypothetical protein TERM 103 81121 - 81085 - G 81 -12.3 -3.58522 | ACGATCAGGCTTAAA CGCCAGCGTTGCAGA AAAAGCG TGTGCAGCGCTGGCG TAAAAGTAGCGTTAC CKO_00086 83005 - 81476 - | regulatory ATPase RavA TERM 104 82746 - 82729 - G 70 -3.3 -4.79826 | overlap 82730 AGAGAGGACCAAAAA CCTCCTC GGGC GTGGAGA AACGCGTCATCAGAT TERM 105 83051 - 83063 + H 83 -4.1 -5.27335 | AAGCAATAATAGACT GAAGC ATC GTTTC TTTTTCTTTGCGCCA CKO_00087 83277 - 85145 + | potassium transport protein Kup TERM 106 85184 - 85156 - f 75 -10.1 -3.55622 | opp_overlap 85156 85157, overlap 85157 TTTAAGCCTTTTAAA GTGCCGGGCGGCG CAG CGCCGCTGGGCAA TTATCCCCGTCGCAT TERM 107 85156 - 85184 + F 85 -12.3 -3.31263 | opp_overlap 85156 85157, overlap 85157 TTTAAGCCTTTTAAA GTGCCGGGCGGCG CAG CGCCGCTGGGCAA TTATCCCCGTCGCAT TERM 108 85157 - 85183 + F 90 -15.8 -2.58544 | opp_overlap 85156 85157, overlap 85156 TTAAGCCTTTTAAAG TGCCGGGCGGCG CAG CGCCGCTGGGCA ATTATCCCCGTCGCA TERM 109 85183 - 85157 - f 83 -13.6 -2.73159 | opp_overlap 85157 85156, overlap 85156 TTAAGCCTTTTAAAG TGCCGGGCGGCG CAG CGCCGCTGGGCA ATTATCCCCGTCGCA TERM 110 85667 - 85650 - g 77 -4.1 -5.09173 | GAACATTTTAAAAAA CTAACCG CAGA CAGTCAG GCGGTGATTCGCAGC TERM 111 85673 - 85707 + G 80 -10.1 -3.92996 | gap 1, overlap 85675 85703 AGACAGTCAGGCGGT GATTCGCA-GCGGGGA GTGC TCCCCGTATGCGAATG TTATTCTCTGTGCCG TERM 112 85675 - 85705 + G 85 -12.7 -3.55061 | gap 1, overlap 85673 85703 ACAGTCAGGCGGTGA TTCGCA-GCGGGGA GTGC TCCCCGTATGCGAA TGTTATTCTCTGTGC CKO_00088 85440 - 85736 + | hypothetical protein CKO_00089 85744 - 87249 + | D-ribose transporter ATP binding protein CKO_00090 87255 - 88220 + | ribose ABC transporter permease protein TERM 113 88449 - 88418 - g 71 -10.8 -3.30635 | TAAACTGGGCTATAA CCTGGTCGTGCTGG ACTC CCAGAACAACCCGG CGAAAGAGCTGGCTA CKO_00091 88245 - 89135 + | D-ribose transporter subunit RbsB TERM 114 89535 - 89573 + G 77 -3.9 -5.1356 | TTGATATTGTTCCGG TCAGCGTGATTAACGG-GG AAT CTACCGG-AGTCGCGCTGA TTTTTGTTAATGGCG CKO_00092 89276 - 90205 + | ribokinase TERM 115 90366 - 90340 - g 86 -12.2 -3.82208 | GATTAAAGAGTTAAA CTACGCGCCTTC AGC GTTGGCGCGTAG CCTGAAATTAAATCA TERM 116 90937 - 90926 - g 71 -7.2 -4.06419 | opp_overlap 90925 90926 CTGTCCCATAAACAA CGCC CACA GGCG GTATTTGCCGGCAAT CKO_00093 90218 - 91207 + | transcriptional repressor RbsR CKO_00094 92600 - 91173 - | hypothetical protein TERM 117 91773 - 91755 - G 71 -10.3 -3.21416 | overlap 91760 CAGCGGCATCAGGAA GGGAACG CATCC CGTTCCC AGACGCGTGGCGAGG TERM 118 92565 - 92545 - G 87 -2.5 -5.60993 | overlap 92549 GCCTGCATAAAAAAA GCCATAG CCGCTAT CCACGGC AACCCGGCCATACTG CKO_00095 93316 - 92612 - | hypothetical protein CKO_00096 93319 - 93453 + | hypothetical protein TERM 119 93601 - 93585 - T 78 -5.1 -5.02421 | overlap 93586 AAAAGCAAAAATAAA TGCTTGA CTC TCAAGCG GGAAAGCGTATTATG TERM 120 95406 - 95393 - T 75 -6.7 -4.45807 | overlap 95390 GATGAAAAGAAAGAA GCAAG GCGT CTTGC GATTGAGACTTCAGT TERM 121 96179 - 96167 - T 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 122 99042 - 99023 - T 74 -10.8 -3.1733 | opp_overlap 99023, overlap 99021 99020 CCTGCCAGAAAATTA TCCTTAGC ATTT GCTAAGGA TTTTTTTTGCCTGAA TERM 123 99023 - 99042 + T 100 -10.8 -5.81412 | opp_overlap 99023 99021 99020 CCTGCCAGAAAATTA TCCTTAGC ATTT GCTAAGGA TTTTTTTTGCCTGAA CKO_00103 99963 - 99118 - | transcriptional regulator HdfR CKO_00104 100070 - 100408 + | hypothetical protein TERM 124 100437 - 100409 - T 83 -13.4 -3.22223 | opp_overlap 100417, overlap 100417 GAATCTGACGATTAA TAAAAAAAGGGC GAAAT GCCCTTTTTTTA CGTCAGTAGTTTTTG TERM 125 100417 - 100429 + T 91 -6.9 -5.47821 | opp_overlap 100409 100417 CGATTAATAAAAAAA GGGCG AAA TGCCC TTTTTTTACGTCAGT TERM 126 100429 - 100417 - T 100 -6.2 -5.84381 | opp_overlap 100417, overlap 100409 CGATTAATAAAAAAA GGGC GAAAT GCCC TTTTTTTACGTCAGT CKO_00105 101955 - 100435 - | hypothetical protein TERM 127 101219 - 101232 + g 77 -8.1 -4.11304 | opp_overlap 101215 AGGCTGAGAATCGCC GCGCT TTCC AGCGC TTCTTTGTCACTTAA TERM 128 102007 - 101993 - g 74 -4.2 -4.7254 | overlap 101994 ATGCTGCATTAAAAA CCAGGA ATA TCCTGC ACGATCGTTAACTTT TERM 129 102106 - 102095 - g 74 -2.2 -5.00616 | CGTGCTCGCAAAAAA TCAC AGAT GCGA AAAAAAGATGGGGGT CKO_00106 101967 - 102206 + | hypothetical protein TERM 130 102455 - 102428 - f 79 -11.2 -3.45366 | opp_overlap 102430, overlap 102413 102430 GCCTTAACGAACTAA GACCCCCGCACC GAAA GGTCCGGGGGTT TTTTTTTGACCTTAA TERM 131 102453 - 102430 - f 86 -13.8 -3.29727 | opp_overlap 102430, overlap 102428 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTTGACCTT TERM 132 102430 - 102453 + F 100 -13.8 -6.10489 | opp_overlap 102430 102428 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTTGACCTT TERM 133 102846 - 102868 + G 77 -8.5 -4.09739 | gap 1, overlap 102845 ACGGGTCAGGTTTCC GC-TCCGTTC ATCG GAACGGACGC TTTTCAGGAGGTTGA CKO_00107 102546 - 104192 + | acetolactate synthase 2 catalytic subunit CKO_00108 104189 - 104452 + | acetolactate synthase 2 regulatory subunit TERM 134 104459 - 104442 - f 72 -5.5 -4.3767 | overlap 104444 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAAGAAAAATGAC CKO_00109 104470 - 105399 + | branched-chain amino acid aminotransferase TERM 135 105437 - 105408 - f 100 -15.9 -5.04601 | opp_overlap 105412 TCCATAAATTAAAAA TAAATGGGACGGC ACGC ACCGTCCCATTTA ACAGACAGACACTGG TERM 136 105412 - 105433 + F 86 -11.6 -3.53012 | opp_overlap 105408 TAAATTAAAAATAAA TGGGACGG CACGCA CCGTCCCA TTTAACAGACAGACA CKO_00110 105508 - 107316 + | dihydroxy-acid dehydratase TERM 137 107366 - 107391 + G 81 -13.9 -2.87132 | GGAAGGGGCGGAGTA CCTGCGTGCGG TACT CCGCGCGCCGG TATATGAAGCAGCGC TERM 138 107482 - 107436 - g 74 -3.1 -4.95854 | gap 1, overlap 107430 107480 CAAAAAATGGAAAAA CTTTCTTCGCGCCTCGACAA CGTTATTC TCGT-GAAGCGTGAAGACAG GCAGCCTGTACACAG CKO_00111 107316 - 108863 + | threonine dehydratase CKO_00112 109774 - 108956 - | DNA-binding transcriptional regulator IlvY TERM 139 108994 - 109010 + g 100 -9.4 -5.60993 | opp_overlap 108994 AGAACGCATCAATAA GCGGCT CATGC AGCCGC TTTTTTTGTGCGCAA TERM 140 109010 - 108994 - G 70 -9.4 -3.75506 | opp_overlap 108994 AGAACGCATCAATAA GCGGCT CATGC AGCCGC TTTTTTTGTGCGCAA TERM 141 109812 - 109797 - H 71 -6.8 -4.07568 | opp_overlap 109787 109803 109803 GCGCTGCGGCCAAAA TGGCGA CTTT CCGCCA GATGCAGGAAGGTTT CKO_00113 110012 - 111487 + | ketol-acid reductoisomerase TERM 142 111578 - 111600 + TF 100 -12 -5.1963 | opp_overlap 111578 CCATCAGGCAAAAAA GCCCGGAG TATGAAC CTCCGGGC TTTTTATTAGTTGCG TERM 143 111600 - 111578 - Tf 100 -12 -5.1101 | opp_overlap 111578 CCATCAGGCAAAAAA GCCCGGAG TATGAAC CTCCGGGC TTTTTATTAGTTGCG CKO_00116 111888 - 111607 - | hypothetical protein TERM 144 112041 - 112056 + GH 70 -9 -3.43773 | opp_overlap 112043, overlap 112039 ATATTCCCTCTGCAA CAGGAC AGCC GTCCTG TCTTTCCATCTCAGG CKO_00114 111755 - 112081 + | hypothetical protein CKO_00115 111775 - 112086 + | hypothetical protein CKO_00117 112092 - 112784 + | hypothetical protein CKO_00118 112843 - 113556 + | hypothetical protein CKO_00119 113553 - 114284 + | hypothetical protein TERM 145 114296 - 114319 + F 77 -11 -3.18264 | overlap 114290 CTGATTAACGCTTTC CAGGCTGTCT GAAA GGGCAGCCTG TTACTCCCTCGGCCC TERM 146 114427 - 114457 + G 73 -10.2 -3.41051 | opp_overlap 114410, overlap 114452 CTGTCGAATTCGTCA CCGGCCCCTGCCTG GTG CTGGCGGGCGCGGG TTCTGGTAAGACTCG TERM 147 115921 - 115896 - g 72 -11.9 -2.83073 | overlap 115895 ATGCGCATGAAGAAC GTCAACCAGCT GTTT AGCTGGATGAC CGAAATGCTTGAAGG CKO_00120 114384 - 116405 + | ATP-dependent DNA helicase Rep TERM 148 116470 - 116496 + T 76 -8.8 -3.79747 | gap 1, opp_overlap 116462 116470 116469 AATGAACGTCCAAAG GCCAGTGGACA TAGCTT TG-CCACTGGC TTTCCTGATCGATCA CKO_00121 117937 - 116453 - | guanosine pentaphosphate phosphohydrolase TERM 149 117385 - 117395 + g 73 -5.4 -4.63218 | GCGCGGCTTTTTCCG CTTC ATC GAAG TTTTCTTGCGCCAGA CKO_00122 119211 - 117946 - | ATP-dependent RNA helicase RhlB CKO_00123 119310 - 119684 + | hypothetical protein CKO_00124 120025 - 121284 + | transcription termination factor Rho TERM 150 121323 - 121304 - f 100 -13.6 -4.2349 | opp_overlap 121304 GGCTGATACCGAAAA CGCCACGT TTTT ACGTGGCG TTTTTCTTTTACGAT TERM 151 121304 - 121323 + F 100 -13.6 -5.46706 | opp_overlap 121304 GGCTGATACCGAAAA CGCCACGT TTTT ACGTGGCG TTTTTCTTTTACGAT CKO_00125 121487 - 122617 + | hypothetical protein CKO_00126 122630 - 123676 + | lipopolysaccharide biosynthesis protein WzzE TERM 152 123686 - 123713 + F 75 -11.3 -3.01924 | opp_overlap 123680 ATTTAGCAACATCTC AGCAGTGAGGG GTTAGG CCCTCACTGCC TATTCGAAGAGAATC CKO_00127 123732 - 124862 + | hypothetical protein CKO_00128 124859 - 126121 + | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 153 126301 - 126325 + G 87 -8.5 -4.58395 | overlap 126302 GAGAGAGTGGATATC TGCGATCGGGC ATC GCTGGATCGCG TTTTTCAGCAGTACC TERM 154 126302 - 126324 + G 70 -9.8 -3.34716 | overlap 126301 AGAGAGTGGATATCT GCGATCGGGC ATC GCTGGATCGC GTTTTTCAGCAGTAC CKO_00129 126121 - 127188 + | dTDP-glucose 4,6-dehydratase TERM 155 127465 - 127446 - g 70 -9.2 -3.65201 | opp_overlap 127458, overlap 127447 CAATATGCCGAACAA CCCAGCCC GGAT GGGCTGGC GCAGGCCTTTATCAT TERM 156 127464 - 127447 - g 76 -12.7 -2.78639 | opp_overlap 127458, overlap 127446 AATATGCCGAACAAC CCAGCCC GGAT GGGCTGG CGCAGGCCTTTATCA TERM 157 127695 - 127685 - g 71 -4.6 -4.63218 | CTCGCTGGAAGAAAA GCCG AAA CAGC CGAAATCAAACTGGG CKO_00130 127206 - 128087 + | hypothetical protein TERM 158 128414 - 128429 + G 83 -6 -4.9218 | overlap 128409 CACCGTGGTATGCGC CGGACG CCAG CGCCCG TTTTTATGCTCAGTG TERM 159 128467 - 128454 - g 77 -8.1 -4.1899 | opp_overlap 128457 TCAGTGGATTGAAAA TGCCG TGCG CGGCA CCTTCGATCACCAGT CKO_00131 128065 - 128742 + | TDP-fucosamine acetyltransferase TERM 160 129302 - 129292 - g 76 -3.2 -5.01811 | TCACGAAACCAAAAA CTAC ACG GCAG GTGGTGAAGGCGGCG CKO_00132 128747 - 129877 + | TDP-4-oxo-6-deoxy-D-glucose transaminase CKO_00133 129879 - 131129 + | hypothetical protein TERM 161 131178 - 131188 + G 81 -6.8 -4.68593 | opp_overlap 131178 CTCACCATAATCAAA CCGT GCT ACGG TTTTTCAATGATGCG TERM 162 131402 - 131388 - g 72 -11.4 -3.05963 | overlap 131391 ACGGTCAGTTCAATA CCAGCC TGT GGCTGG CGCTGCTAAGTGGCG CKO_00134 131126 - 132205 + | 4-alpha-L-fucosyltransferase CKO_00135 132202 - 133554 + | putative enterobacterial common antigen polymerase TERM 163 133877 - 133887 + G 72 -2.4 -4.91109 | GCGCGCTGGTAAAGA AGGG ACG CCCG TTTTTCTGGTCGGCG TERM 164 133998 - 134012 + G 77 -11.4 -3.54543 | opp_overlap 133992 TATTTTAAACCTGAG CAGCGC CAG GCGCTG TTTGAGCGCATCCAT CKO_00136 133557 - 134297 + | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 165 134475 - 134460 - f 76 -8.2 -4.03888 | TACCCATAACAATAA CCGGCA ACAA CGCCGG AACGAGTGCAAACAC TERM 166 135467 - 135451 - g 100 -11.5 -5.00616 | TGCCCTGGCAAAAAA CCGCCAG CTT CCGGCGG CGATGGCGAAAGTCT CKO_00137 134504 - 135889 + | putative transport protein YifK TERM 167 136433 - 136448 + T 100 -11.8 -5.79595 | CCGACCAATTTTGAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCACC TERM 168 136921 - 136942 + T 100 -15.9 -5.60993 | ACAGACCTGTTTTGA CGCCTGCTC ATTT GAGCAGGCG TTTTTTTATGGGGAA CKO_00144 138249 - 137050 - | putative protoheme IX biogenesis protein TERM 169 137287 - 137301 + g 71 -4.2 -4.60487 | overlap 137288 137290 GCCAACGGTTTTAAT CTGCTG GCG CAGCAC TTTTTCCAGCTGCTC CKO_00145 139430 - 138249 - | putative uroporphyrinogen III C-methyltransferase TERM 170 139207 - 139234 + g 75 -7 -4.41616 | gap 1, overlap 139208 139224 TGCAGCGCCGTAAGT TGGTTAACCAGCG CAT CGCTGG-TGGCCG TTTGTTTAACGGCCT CKO_00146 140192 - 139452 - | uroporphyrinogen-III synthase CKO_00147 141145 - 140189 - | porphobilinogen deaminase TERM 171 143295 - 143281 - g 75 -7.1 -4.4261 | opp_overlap 143285 143287 TGGCGAAGAGCAAAA CTGCC TGGTC GGCAG TGTCGACCTGTTGTA TERM 172 143287 - 143303 + G 70 -10.1 -3.31905 | opp_overlap 143281, overlap 143285 AGAGCAAAACTGCCT GGTCGGC AGT GTCGACC TGTTGTATCGCAACT TERM 173 143859 - 143872 + G 72 -3.7 -4.73613 | overlap 143854 AAGAAGAGCTGGTAC GCGAC GTGA GCCGC TTTTATTCGTCGTCG CKO_00148 141449 - 144064 + | adenylate cyclase CKO_00149 144464 - 144144 - | frataxin-like protein TERM 174 144721 - 144704 - g 81 -6.9 -4.83169 | overlap 144705 ACCTGCTGACAAAAA CGCGCCG CCGC CGACGCA TGAGGTTGATTCGCA CKO_00150 144603 - 144806 + | hypothetical protein CKO_00151 144840 - 145667 + | diaminopimelate epimerase CKO_00152 145664 - 146371 + | hypothetical protein CKO_00153 146368 - 147270 + | site-specific tyrosine recombinase XerC TERM 175 147669 - 147654 - g 95 -6.1 -5.40072 | opp_overlap 147654, overlap 147656 CGGCTTGCAAAAAAA TGGCC GCTGGT GGCCA TTACTAACGGCAATG CKO_00154 147270 - 147986 + | flavin mononucleotide phosphatase TERM 176 149442 - 149417 - g 85 -11.1 -3.96148 | gap 1, opp_overlap 149430 CTGTTGCAGGAGAAA GCGCTGGCTGGC CGC GCC-GCAAGCGC CCTGCAACGCTTTAT CKO_00155 148073 - 150235 + | DNA-dependent helicase II CKO_00156 150359 - 150192 - | hypothetical protein TERM 177 150282 - 150310 + g 100 -14.7 -3.95817 | TCTGCTAGCCTTATA CGCTGAAGGGCAA TAA TTGTTCTTCAGCG TTTCGTTGCGTGTTG CKO_00157 150595 - 151545 + | magnesium/nickel/cobalt transporter CorA CKO_00158 152517 - 151624 - | hypothetical protein TERM 178 151708 - 151696 - G 70 -5.5 -4.46112 | opp_overlap 151696 CGCCACCCAAATAAA GGCGA ACG TCACC ATCTTATCGGCGCCC TERM 179 151800 - 151790 - G 76 -3.2 -5.05782 | overlap 151780 151791 151794 ATGTACTGGAAAAAA CCCA GCG TGGA GAGGCGCAGGCGCGT TERM 180 152503 - 152468 - G 83 -6 -4.87133 | gap 1, opp_overlap 152470 152471, overlap 152470 152471 ATGCCCCAAATAAAA TAGGCGGCAAGAGCGAG TAA CACGCCCT-GCCGCGTT TGCTTAGCATCCATC TERM 181 152501 - 152470 - G 74 -8.6 -4.05678 | gap 1, opp_overlap 152470 152471, overlap 152468 152471 GCCCCAAATAAAATA GGCGGCAAGAGCGAG TAA CACGCCCT-GCCGCG TTTGCTTAGCATCCA TERM 182 152500 - 152471 - G 76 -12.1 -3.02684 | gap 1, opp_overlap 152471 152470, overlap 152470 152468 CCCCAAATAAAATAG GCGGCAAGAGCGAG TAA CACGCCCT-GCCGC GTTTGCTTAGCATCC CKO_00159 153046 - 152561 - | hypothetical protein CKO_00160 153194 - 154063 + | phospholipase A TERM 183 154105 - 154126 + F 100 -12.3 -5.27335 | overlap 154112 TTGCAGTTTCTTTCG CAGGCGCTG AAAA TAGCGCCTG TTTTTATTTCAGGCA TERM 184 155136 - 155124 - g 80 -10.5 -3.80573 | CCTACTATCAGGAAA CCGGC CGC GCCGG GCGTGACGGCCTGCC CKO_00161 154154 - 155983 + | ATP-dependent DNA helicase RecQ TERM 185 156099 - 156112 + GF 91 -3.8 -5.4433 | opp_overlap 156099 TCGTTGCGTTAATGA GTCC TGGACC GGAC TTTTTCTTTGTCTCT TERM 186 156353 - 156335 - gf 84 -3.1 -5.40072 | gap 1, overlap 156338 156340 GGCGCGCTAAAAAAA CAGG-ACG TCGC CGCGCCTG CGCCGCAGATTGAAC CKO_00162 156047 - 156667 + | threonine efflux system CKO_00164 156765 - 156664 - | hypothetical protein CKO_00163 156601 - 156753 + | hypothetical protein CKO_00165 157330 - 156710 - | homoserine/homoserine lactone efflux protein TERM 187 157613 - 157600 - g 74 -2.4 -4.99035 | opp_overlap 157600 TCACGCACAGAAAAA CGAT CGTGTC ATCG TCATCTGTCCAGGTC CKO_00166 157442 - 158434 + | lysophospholipase L2 TERM 188 158443 - 158453 + F 72 -8.2 -3.77241 | TAACTAATTCATCCA GCGG AAA CCGC TTTGCCTTGAGGTTT TERM 189 158963 - 158946 - g 70 -2.7 -4.72986 | gap 1, overlap 158949 GATGCGCATGAAAAA CTACTGCC GCT GG-AGCAG GCGATTAACGCACGT CKO_00167 158478 - 159278 + | putative sugar phosphatase CKO_00169 159766 - 159365 - | hypothetical protein CKO_00170 161099 - 160146 - | hypothetical protein CKO_00168 159359 - 160258 + | hypothetical protein TERM 190 160545 - 160533 - Gf 70 -9.1 -3.32498 | opp_overlap 160541 TACCGGATAGATCAA CAGCG TCT CGCTG GCTAAATCTTCCGGC TERM 191 161522 - 161503 - g 78 -5.7 -4.71426 | gap 1 CTGGGATCAACAAAA GCAGG-CG GGCAT CGACCTGC TGCCGGTGGGCGATT CKO_00171 161348 - 163609 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase CKO_00172 164515 - 163706 - | hypothetical protein TERM 192 164583 - 164595 + rH 72 -9.1 -3.48517 | opp_overlap 164581 164579, overlap 164581 164579 GCAACAAATCACATT GCCTG AAA CAGGC TATCTTTTGTGCAAT CKO_00175 165691 - 164819 - | hypothetical protein CKO_00173 164774 - 165535 + | uridine phosphorylase TERM 193 165556 - 165572 + gF 100 -9.4 -5.2853 | opp_overlap 165556 CCCTTCCCCACGAAA GGCCGA CGCGT TCGGCC TTTTCTTTTTGCGTA TERM 194 165572 - 165556 - Gf 76 -9.4 -3.72576 | opp_overlap 165556 CCCTTCCCCACGAAA GGCCGA CGCGT TCGGCC TTTTCTTTTTGCGTA TERM 195 166290 - 166276 - gH 82 -7.1 -4.78839 | AAGGCGATAATAAAA CCCAG GGTAA CTGGG GAGAAGTAGTGCTGA TERM 196 166590 - 166634 + GH 72 -3.6 -4.72986 | gap 2 CAGTTGCCGGGGTTA CGCACGCTCGACTATGTGCTGA TGT TCATTCC-T-GTCGAGCCTGCG TTTTTACTGGCGCTG CKO_00174 165672 - 167102 + | DNA recombination protein RmuC TERM 197 167265 - 167278 + G 72 -2.3 -4.96646 | AGAGCAGAAAGCTGA CATGG TGGC CCACG TTTTTCATTCTGTGG CKO_00176 167197 - 167952 + | ubiquinone/menaquinone biosynthesis methyltransferase CKO_00177 167966 - 168571 + | hypothetical protein TERM 198 169850 - 169860 + G 77 -8.2 -4.21974 | opp_overlap 169850 TGGATCTGTGGAAAA CGGC GAA GCCG TTTCTTGAATCCTGG TERM 199 169860 - 169850 - g 77 -8.2 -4.08767 | opp_overlap 169850 TGGATCTGTGGAAAA CGGC GAA GCCG TTTCTTGAATCCTGG CKO_00178 168568 - 170208 + | putative ubiquinone biosynthesis protein UbiB TERM 200 170375 - 170353 - g 70 -3.2 -4.7254 | opp_overlap 170355, overlap 170355 ATTTGGCACCAAAAA GCTCGGCTCC ATC GGTTCCGATC TTGGCGCGTCCATTA CKO_00179 170282 - 170548 + | twin argininte translocase protein A CKO_00180 170552 - 171100 + | sec-independent translocase TERM 201 171293 - 171303 + G 71 -4.6 -4.59109 | TGATCGCCACCGACG TGGC CTC GCCG TTTTTCACCCCTATC CKO_00181 171103 - 171882 + | TatABCE protein translocation system subunit TERM 202 171909 - 171884 - f 86 -8.9 -4.49364 | opp_overlap 171886 171889, overlap 171885 171886 171889 AAACTGAAGAATAAA CGCAACCGCCC GTCA GGGCGGTTGTT ATATGGGAGGAAGCA TERM 203 171908 - 171885 - f 81 -12.4 -3.27992 | opp_overlap 171886 171889, overlap 171884 171886 171889 AACTGAAGAATAAAC GCAACCGCCC GTCA GGGCGGTTGT TATATGGGAGGAAGC TERM 204 171907 - 171886 - f 90 -15.9 -2.5571 | opp_overlap 171886 171889, overlap 171885 171884 171889 ACTGAAGAATAAACG CAACCGCCC GTCA GGGCGGTTG TTATATGGGAGGAAG TERM 205 171886 - 171907 + F 100 -15.9 -3.48276 | opp_overlap 171886 171885 171884 171889, overlap 171889 ACTGAAGAATAAACG CAACCGCCC GTCA GGGCGGTTG TTATATGGGAGGAAG TERM 206 171904 - 171889 - f 82 -11.8 -3.41554 | opp_overlap 171886 171889, overlap 171886 171885 171884 GAAGAATAAACGCAA CCGCCC GTCA GGGCGG TTGTTATATGGGAGG TERM 207 171889 - 171904 + F 95 -11.8 -3.88232 | opp_overlap 171889 171886 171885 171884, overlap 171886 GAAGAATAAACGCAA CCGCCC GTCA GGGCGG TTGTTATATGGGAGG CKO_00182 171912 - 172706 + | DNase TatD CKO_00183 173202 - 172714 - | transcriptional activator RfaH CKO_00184 173446 - 174930 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 208 174935 - 174923 - f 72 -10.5 -2.78015 | opp_overlap 174921, overlap 174922 TTAACGACGGTAAAG GCGCC TGA GGCGC GATCGTTTTGCCCTA CKO_00185 174972 - 175673 + | FMN reductase TERM 209 175704 - 175686 - T 100 -9.5 -5.87996 | TAAGCAATAAAAAAA CCCGCCC CTGAC AGGCGGG AAGAACGGCAACTAA CKO_00186 175818 - 175666 - | hypothetical protein CKO_00187 176999 - 175830 - | 3-ketoacyl-CoA thiolase TERM 210 176427 - 176439 + g 73 -5.5 -4.56597 | overlap 176413 176410 GTCATGACCGCCGGT CGGGA TGA TCTCG TTTTTAAACGCGCCG TERM 211 176477 - 176448 - G 89 -13.5 -3.53224 | gap 1 GATCTCGTTTTTAAA CGCGCC-GGACTGC GTG GCTGCCCAGGCGCG GGCGTGTGAACGTGC CKO_00188 179198 - 177009 - | multifunctional fatty acid oxidation complex subunit alpha CKO_00189 179323 - 179042 - | hypothetical protein TERM 212 179315 - 179293 - GH 100 -9.9 -5.60864 | gap 1 GAGAGATTAAAAAAA TGCCGATGCG ATCA CGC-TCGGCA GAAATCACGCTCTCC CKO_00190 179387 - 180718 + | proline dipeptidase TERM 213 180821 - 180776 - g 100 -7.6 -5.62219 | gap 2 AAGAGATCAAAAAAA GCCGCTTCATTACGCTGCTCGC CCAC ACGGACGGCGT--TGAAGCGGC GAAAGCCTTTGTTGA CKO_00191 180718 - 181332 + | hypothetical protein CKO_00192 181370 - 182821 + | potassium transporter CKO_00193 182833 - 183378 + | protoporphyrinogen oxidase TERM 214 185369 - 185356 - f 75 -6.7 -4.45807 | overlap 185353 GATGAAAAGAAAGAA GCAAG GCGT CTTGC GATTGAGACTTCAGT TERM 215 186142 - 186130 - f 72 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 216 188913 - 188880 - f 74 -8.1 -3.96298 | opp_overlap 188887, overlap 188885 188887 CAGGCATTAATTAAA GTGAAGAGGCCATCC TGAG GGATGGCCTTTTTGC GTTCATGCGCCCGGG TERM 217 188908 - 188885 - f 79 -11 -3.338 | opp_overlap 188887, overlap 188880 188887 ATTAATTAAAGTGAA GAGGCCATCC TGAG GGATGGCCTT TTTGCGTTCATGCGC TERM 218 188906 - 188887 - f 86 -13.6 -3.22878 | opp_overlap 188887, overlap 188885 188880 TAATTAAAGTGAAGA GGCCATCC TGAG GGATGGCC TTTTTGCGTTCATGC TERM 219 188887 - 188906 + F 100 -13.6 -4.7629 | opp_overlap 188887 188885 188880 TAATTAAAGTGAAGA GGCCATCC TGAG GGATGGCC TTTTTGCGTTCATGC TERM 220 189065 - 189047 - f 73 -2.3 -5.1675 | overlap 189049 189059 189061 TCATTCACTAAAAAA GACAGTG AAAAG CACCGAC GAGCTCGGGTGGATC CKO_00197 189051 - 190400 + | alpha-ketoglutarate transporter CKO_00198 190669 - 190397 - | hypothetical protein TERM 221 190740 - 190760 + r 91 -8.2 -4.98531 | opp_overlap 190741, overlap 190741 ACCCTCACAGGAAAA ACCCCGTC GCAGG GACGGGGC TTTTTGATTTACAGA TERM 222 190741 - 190759 + r 86 -11.7 -3.58396 | opp_overlap 190741, overlap 190740 CCCTCACAGGAAAAA CCCCGTC GCAGG GACGGGG CTTTTTGATTTACAG TERM 223 190759 - 190741 - R 100 -11.7 -4.8048 | opp_overlap 190741 190740 CCCTCACAGGAAAAA CCCCGTC GCAGG GACGGGG CTTTTTGATTTACAG CKO_00199 192124 - 190769 - | phosphatidylserine synthase CKO_00200 194899 - 192239 - | hypothetical protein TERM 224 192327 - 192314 - G 74 -8.1 -3.96093 | GATATCAACATCAAA CCCGA GCTT TCGGG CCAGTGCCACCATGC CKO_00201 195459 - 194935 - | hypothetical protein TERM 225 195494 - 195473 - R 72 -2.9 -5.01497 | overlap 195475 195492 ATCACCAGACAAAAA CGGCTTGTC GCCT GAGAAGGCG AGAGCGTATCGCACA TERM 226 195591 - 195575 - R 82 -7.9 -4.63218 | overlap 195578 CCTCTGGCAAGAAAA GGACGCG TGG CGCGTGC GAGGCGTTCGGCGCG TERM 227 195696 - 195676 - R 100 -14.7 -4.16943 | TCGCAGAGGTGAAAA CGGGGCACA AGA TGCGCCCCG TGGAGATTACAGCGA CKO_00202 196122 - 195703 - | thioredoxin 2 TERM 228 196901 - 196879 - g 100 -10.6 -4.72272 | TTTCCTGATTAAAAA GCGTAACGGT ACG ACCGTTAAGC AGTGGGTAAGCCAGG CKO_00203 196331 - 197377 + | putative methyltransferase TERM 229 197447 - 197471 + T 71 -10 -3.29511 | gap 1 TAGGCCGGGTACTCG GCGTAAGCGCC TGAT GGCGC-TGCGC TTATCCGGGCCTGCG CKO_00204 198231 - 197542 - | uracil-DNA glycosylase TERM 230 198648 - 198628 - g 76 -5.3 -4.70659 | opp_overlap 198647, overlap 198629 CTGGACAGCGAAAAA GGCGAAGCA CGT TGCATCGCG GCGAAAGCTGGTTTT CKO_00205 198550 - 198933 + | autonomous glycyl radical cofactor GrcA TERM 231 198981 - 198947 - T 90 -13.7 -3.36175 | opp_overlap 198955, overlap 198949 198955 AAGGCTGACTGATAA CATAAAAACGCCGGG TTAGC CCCGGCGTTTTTTTA CTCTTCGTTGGACTG TERM 232 198979 - 198949 - T 86 -14.1 -3.24924 | opp_overlap 198955, overlap 198947 198955 GGCTGACTGATAACA TAAAAACGCCGGG TTAGC CCCGGCGTTTTTT TACTCTTCGTTGGAC TERM 233 198973 - 198955 - T 100 -13.1 -5.1523 | opp_overlap 198955, overlap 198949 198947 CTGATAACATAAAAA CGCCGGG TTAGC CCCGGCG TTTTTTTACTCTTCG TERM 234 198955 - 198973 + T 100 -13.1 -5.63374 | opp_overlap 198955 198949 198947 CTGATAACATAAAAA CGCCGGG TTAGC CCCGGCG TTTTTTTACTCTTCG CKO_00206 200316 - 198979 - | ATP-dependent RNA helicase SrmB TERM 235 201069 - 201095 + G 71 -9.5 -3.57462 | gap 1, overlap 201073 CATCGGGTACTGTTG GCATTTTCCCCG CGAA CGGGG-GAATGC TTTAGCGATCGCCTG TERM 236 201154 - 201167 + G 76 -3.1 -5.12172 | gap 1, overlap 201153 CTGAAGGGTACACGG CG-CTG ACC CAGGCG TTTTATTTGTTCATG CKO_00207 200526 - 201185 + | hypothetical protein CKO_00208 202792 - 201170 - | L-aspartate oxidase TERM 237 202010 - 201965 - G 80 -9.5 -3.94811 | gap 1, opp_overlap 201963, overlap 201966 AACATCAGGCATAAA GC-GCGTGCCGTCCGGGCGCTT GAG ATGCGCCCCTTCGCCACGCAGC GCTTCCGTCAGCAGA TERM 238 202674 - 202655 - G 79 -7.8 -4.46212 | opp_overlap 202667 GCCCTGAGCATAAAA CGTTGAGC CTTC GCTCACCG GGCCTTTACTCAGGA CKO_00209 203218 - 203793 + | RNA polymerase sigma factor RpoE TERM 239 204099 - 204087 - g 79 -7.7 -4.3898 | opp_overlap 204077 ACCAGTGGCAGAAAA TGCCA TTC TGGCA GAAAATGCGTCCGTG TERM 240 204123 - 204105 - g 74 -6.7 -4.3739 | gap 1 CATTCTGGCAGAAAA TGCGTCCG TGGG CGG-CGCA GCTCACTCAAATGGG CKO_00210 203825 - 204475 + | anti-RNA polymerase sigma factor SigE CKO_00211 204475 - 205431 + | periplasmic negative regulator of sigmaE CKO_00212 205428 - 205907 + | SoxR reducing system protein RseC TERM 241 206166 - 206151 - f 73 -10.4 -3.04461 | CAGCGACTTCTAAGA GCCTGC TCAG GCAGGC GTAAGGCACAATAAT CKO_00213 206190 - 207989 + | GTP-binding protein LepA CKO_00214 208005 - 208979 + | lsignal peptidase I TERM 242 208993 - 209025 + F 100 -15.8 -4.22554 | opp_overlap 208990 AATTTCTGATAATCG TTCATGTTGTCGTC ATTGC GGCGACAACATGAA TTATTTATTGGATAA CKO_00216 209878 - 210783 + | GTP-binding protein Era CKO_00217 210855 - 211532 + | hypothetical protein CKO_00218 211544 - 212275 + | pyridoxal phosphate biosynthetic protein PdxJ TERM 243 212399 - 212417 + G 74 -6.6 -4.36914 | GGGCTATCTGGGAGA CGCATCAG CAA CCGGTGCG TTTTCTCGCCAAGCG CKO_00219 212275 - 212655 + | 4'-phosphopantetheinyl transferase CKO_00220 212987 - 212727 - | hypothetical protein CKO_00221 213891 - 213043 - | putative DNA-binding transcriptional regulator TERM 244 214001 - 213991 - H 78 -5.4 -4.90869 | ATTATGAATTAAAAA TTCC TAA GGAA CAAAAATGAATCTCG CKO_00222 214052 - 214900 + | N-acetylmuramic acid-6-phosphate etherase CKO_00223 215007 - 215642 + | hypothetical protein TERM 245 215687 - 215697 + G 70 -6.8 -4.13591 | CCCGCTTTTATTACC GGAG TGT CTCC TTTGTCTGATGTTGA CKO_00224 215660 - 216202 + | tRNA-specific adenosine deaminase TERM 246 216192 - 216182 - T 83 -4 -5.4477 | AAAGCGCTAAAAAAA TCTT CGC AAGA ATCGTTGTAGGGCGG CKO_00225 217786 - 216239 - | putative transglycosylase TERM 247 216368 - 216330 - G 75 -6.7 -4.44099 | gap 1, overlap 216350 AAGAAAGAAGAGAAA GGAAATGTCTCCGTGTCA AACT CGGC-CGGAGACACTGCC GGGTAATCCTGCGCC TERM 248 216536 - 216550 + g 74 -7.8 -4.18018 | overlap 216529 216528 TTGTTTCTGGCTGAG CAGCGG CAG CCGTTG TTTTACATCGGCCCA TERM 249 217767 - 217777 + g 78 -2.6 -5.1848 | opp_overlap 217767 CCGATGAACAGATAA TTAA TCT TTAA TTTTTTCAATTAGTT CKO_00227 218017 - 217787 - | hypothetical protein TERM 250 218035 - 218023 - gR 83 -10.5 -3.70902 | TTGCGCACACTTAAA GCGCC TCA GGCGC TTCGAAGACGAGAGA CKO_00228 221581 - 220916 - | hypothetical protein TERM 251 221836 - 221806 - gR 73 -9.6 -3.37796 | opp_overlap 221829 CGTTACCACGGAGAA CGGTCGCGCCACCA TTA TGATGCCGCACCCG GAGCGCGTCTTCCGC CKO_00226 217922 - 221941 + | phosphoribosylformylglycinamidine synthase TERM 252 221983 - 221954 - TR 76 -9.3 -3.65827 | gap 1, overlap 221955 221970 TAATCCGCACGTAAA TGGCCCGATAAGCA AAG CGCT-ATCGGGCCT GGACATACGCGTAGG TERM 253 221982 - 221955 - TR 79 -12.8 -2.79175 | gap 1, overlap 221954 221970 AATCCGCACGTAAAT GGCCCGATAAGCA AAG CGCT-ATCGGGCC TGGACATACGCGTAG CKO_00229 222129 - 221938 - | hypothetical protein TERM 254 222032 - 222047 + g 100 -6.8 -5.78622 | opp_overlap 222032 CCATCCGGCAAGGAA GCTTCC GTGA GGGAGC TTTTTTTTGCCCTGC TERM 255 222462 - 222492 + H 93 -16.3 -3.00923 | opp_overlap 222465 222469, overlap 222465 222469 CACCGCCTTATTCCA TAACAAAGCCGGG TTAAT CCCGGCTTTGTTG TATCTGATGTTCCCC TERM 256 222465 - 222489 + H 100 -15.8 -3.64431 | opp_overlap 222465 222469, overlap 222462 222469 CGCCTTATTCCATAA CAAAGCCGGG TTAAT CCCGGCTTTG TTGTATCTGATGTTC TERM 257 222489 - 222465 - H 100 -15.8 -3.32844 | opp_overlap 222465 222462 222469, overlap 222469 CGCCTTATTCCATAA CAAAGCCGGG TTAAT CCCGGCTTTG TTGTATCTGATGTTC TERM 258 222469 - 222485 + H 93 -10.8 -4.43576 | opp_overlap 222465 222469, overlap 222465 222462 TTATTCCATAACAAA GCCGGG TTAAT CCCGGC TTTGTTGTATCTGAT TERM 259 222485 - 222469 - H 90 -10.8 -4.32177 | opp_overlap 222469 222465 222462, overlap 222465 TTATTCCATAACAAA GCCGGG TTAAT CCCGGC TTTGTTGTATCTGAT TERM 260 222949 - 222933 - g 78 -6.5 -4.65168 | opp_overlap 222946 ATTACAGTGTAAAAA TAGCGGC CCT GACGCTA CCGCCGCCGCGCGGC TERM 261 222946 - 222971 + G 80 -8.9 -4.11216 | gap 1, opp_overlap 222933 AATAGCGGCCCTGAC GCTACC-GCCGC CGC GCGGCTGGAGGC TTTTGCCAATGCCAA CKO_00231 222499 - 223980 + | hypothetical protein TERM 262 224234 - 224274 + G 84 -13.3 -3.05596 | opp_overlap 224226, overlap 224243 TAACAATCCGCTTTA CTGGCAGCGGGCGATTG ATTGTGC CGATCGCCTGTTGCCCG TTCAGTCACGCAATG CKO_00232 224085 - 224747 + | hypothetical protein CKO_00233 224744 - 226081 + | hypothetical protein CKO_00234 226158 - 226496 + | nitrogen regulatory protein P-II 1 TERM 263 226507 - 226479 - T 86 -11.7 -3.62597 | opp_overlap 226481, overlap 226481 226497 CGTACCGGCGAAGAA GACGACGCGGC AATTTAA GCCGCGTCGTG CTTGCCGGATGGCGG TERM 264 226505 - 226481 - T 93 -14.3 -3.39288 | opp_overlap 226481, overlap 226479 226497 TACCGGCGAAGAAGA CGACGCGGC AATTTAA GCCGCGTCG TGCTTGCCGGATGGC TERM 265 226481 - 226505 + T 86 -14.3 -2.71731 | opp_overlap 226481 226479 226497 TACCGGCGAAGAAGA CGACGCGGC AATTTAA GCCGCGTCG TGCTTGCCGGATGGC TERM 266 226618 - 226632 + T 70 -5 -4.4267 | overlap 226611 TTATGTGGGCCGAAG CATTCG TAA TGAATG TTTTCGCTTTTCACG CKO_00235 227783 - 226593 - | nitric oxide dioxygenase CKO_00236 228007 - 227831 - | hypothetical protein CKO_00237 228103 - 229362 + | serine hydroxymethyltransferase TERM 267 229381 - 229412 + T 100 -15.4 -3.57144 | opp_overlap 229388, overlap 229388 ATACGCCTGGCATCG TGAAAAAGGCTTCC TGCG GGAAGCCTTTTTTA TTTCCGGGTCACGCC TERM 268 229405 - 229388 - T 95 -11.3 -4.59773 | opp_overlap 229381 229388 TGGCATCGTGAAAAA GGCTTCC TGCG GGAAGCC TTTTTTATTTCCGGG TERM 269 229388 - 229405 + T 100 -11.3 -5.63517 | opp_overlap 229388, overlap 229381 TGGCATCGTGAAAAA GGCTTCC TGCG GGAAGCC TTTTTTATTTCCGGG TERM 270 229483 - 229494 + T 74 -5.8 -4.65895 | opp_overlap 229483 TGAATAATTTTAATA CCAC GCCG GTGG TTTTTCGGTCGACAA CKO_00238 230740 - 229547 - | hypothetical protein TERM 271 230243 - 230259 + g 71 -4.3 -4.56597 | overlap 230246 AACCGGGGTTTTCCA CGGTGCC TGC GGCATGG TTTTTGACGCCCCGG TERM 272 234092 - 234076 - g 88 -13.7 -3.4252 | TCCGACGCATGACAA GGCGCAG CTG CTGCGCC ATGCGCTCAACGTAC CKO_00239 230855 - 234121 + | hypothetical protein TERM 273 234149 - 234132 - f 75 -11.3 -3.06087 | AATAGACCCTGAACA GGTGGAG GCGA CTCCACC TGAAACCTGCTGTTC TERM 274 234250 - 234264 + G 85 -12.8 -3.47431 | overlap 234244 ACTATCTGTCTGGTT GCCGCC TGC GGCGGC TTGCTGTTTGGCTAT CKO_00240 234193 - 235632 + | hypothetical protein TERM 275 235658 - 235677 + GF 81 -12.2 -3.14132 | opp_overlap 235658 GCTGACATTACAAAA CACGCATC TGCG GATGCGTG TTGATCCACAGGGCG TERM 276 235677 - 235658 - gf 100 -12.2 -4.50976 | opp_overlap 235658 GCTGACATTACAAAA CACGCATC TGCG GATGCGTG TTGATCCACAGGGCG TERM 277 235854 - 235872 + GF 84 -6 -4.99043 | overlap 235844 GTGGTGAATCTTCCC CGGCAT GAGGAGG ATGCCG TTTTCTTTCTGCACG CKO_00241 235632 - 236474 + | hypothetical protein CKO_00242 236441 - 236671 + | hypothetical protein CKO_00244 237758 - 237612 - | hypothetical protein CKO_00243 236563 - 237702 + | putative 3-phenylpropionic acid transporter CKO_00245 238974 - 237697 - | stationary phase inducible protein CsiE CKO_00246 239099 - 239737 + | hypothetical protein TERM 278 240020 - 240007 - g 70 -6.7 -4.18018 | CCGGGTCATGGAAAA GTGGT GATT ACCAC ATGGCTGGCGACGCA CKO_00247 239728 - 240708 + | hypothetical protein CKO_00248 241607 - 240813 - | inositol monophosphatase TERM 279 241598 - 241570 - G 72 -12.3 -2.69964 | overlap 241567 TTGGCAATTACATTA CCCGCCTTGCGCG CTG CGCGCACGGCGAT GGTCAGCATCGGATG CKO_00249 241735 - 242466 + | hypothetical protein TERM 280 242589 - 242567 - f 79 -10 -3.6715 | opp_overlap 242579, overlap 242569 GCACTGAAGGTTAAA TACCTGACTA AAT TAGTCAAGTA AATAGTTGACTGATT TERM 281 242612 - 242569 - f 79 -11.2 -3.4149 | opp_overlap 242579, overlap 242567 ACTGAAGGTTAAATA CCTGACTAAATTAGTCAAGT AAAT AGTTGACTGATTTAGTCGGG AATGTCAGACTTGAC TERM 282 242675 - 242663 - f 91 -6.2 -5.55769 | TTTTACAATAAAAAA CCCC GGGCA GGGG CGAGTTTGAGGTTAA TERM 283 242802 - 242812 + G 75 -6.8 -4.38927 | overlap 242789 TATTTCTGAACGTCA GGGA ATT TCCC TTTCTTATCTGGAAC CKO_00250 242698 - 243189 + | DNA-binding transcriptional regulator IscR TERM 284 243343 - 243362 + F 77 -12.1 -2.81464 | ATTTCAGAATCAGGC CGGGGCG TTTACT CGCCCCG TGTACTCGGTCGTAC CKO_00251 243413 - 244648 + | hypothetical protein TERM 285 244708 - 244694 - g 70 -2.9 -4.70659 | opp_overlap 244703 GCTTACAGCGAAAAA GTAAT CGATC ATTAC GAGAATCCACGTAAC TERM 286 244711 - 244731 + G 72 -11.9 -2.71712 | opp_overlap 244714 244715, overlap 244703 244710 AATCGATCATTACGA GAATCCACG TAA CGTGGGTTC CTTTGACAACAGCGA CKO_00252 244676 - 245062 + | scaffold protein CKO_00253 245191 - 245403 + | hypothetical protein TERM 287 245419 - 245445 + F 84 -8.7 -4.68908 | gap 1, opp_overlap 245419 CGTGCTTACCGATAA CCCCAC-CGTGG TCAC CTGCGCGTGGGG TTTGTTTTACCTGAC TERM 288 245757 - 245768 + G 86 -7.2 -4.72272 | opp_overlap 245752, overlap 245752 GAGCAGCATACGGTG CGCG ATAC CGCG TTTTTGATGGAACAG CKO_00254 245499 - 246014 + | co-chaperone HscB TERM 289 246549 - 246537 - g 76 -9.1 -3.93288 | opp_overlap 246546 CGCCAGGGAACGAAA GACGC GGC GCGTC TGGCGGGGCTGCACG CKO_00255 246030 - 247880 + | chaperone protein HscA CKO_00256 247882 - 248217 + | hypothetical protein CKO_00259 248524 - 248327 - | hypothetical protein CKO_00257 248229 - 248429 + | hypothetical protein TERM 290 248456 - 248435 - Gf 81 -7.1 -4.68209 | opp_overlap 248435 AGCTGAATAAATAAA CGGGCTGCC CACG GGTGGCCCG TTTTCCTGTATGCGC TERM 291 248435 - 248456 + gF 95 -11.5 -4.39166 | opp_overlap 248435 AGCTGAATAAATAAA CGGGCTGCC CACG GGTGGCCCG TTTTCCTGTATGCGC TERM 292 248996 - 249014 + GH 70 -10.2 -2.52464 | CGGGGTTCCGATCGC GCGCCGGT GCT GCTGGCGC TGGATTACAACCCAA TERM 293 249667 - 249649 - gH 70 -6.6 -4.08216 | overlap 249652 GCATTTTGTCGAAAA CTACCAGC AGG GCTGGCTG CACATTGACTGCTCT CKO_00258 248489 - 249772 + | aminopeptidase B CKO_00260 249867 - 250643 + | enhanced serine sensitivity protein SseB CKO_00261 251588 - 250734 - | 3-mercaptopyruvate sulfurtransferase TERM 294 252257 - 252269 + Gr 72 -9.1 -3.53811 | CACGCGGGACGTTCA GCCGA GCG TCGGC TTTGCCAGCCGTGGC TERM 295 253489 - 253460 - gR 81 -8.6 -4.2558 | gap 1 TACGCTGGATGAAAA TGGCCG-TGGCGA CGTCT CCGCCAACAGCCA GTGGCAGGAAGCGCA TERM 296 253689 - 253703 + Gr 77 -9.2 -3.99275 | CCCATCGTGGATGAG GGCGGT AAC GCCGCC TTTGATATTGTCTAC TERM 297 253753 - 253743 - gR 85 -2.4 -5.5074 | opp_overlap 253743 CAAGGCAATAAAAAA GCCG CTT CGGG TTTGCAGGTTCGTTT TERM 298 254429 - 254417 - gR 70 -9.1 -3.36694 | overlap 254415 AGCCAGCGCTAAACA TGGCG AAA CGCCA AAACAGATCAACGTA TERM 299 254646 - 254628 - gR 72 -8.1 -3.78329 | gap 1, overlap 254629 GGCGATGAACTCAAA CGCGGCGG CAAA CCGCCG-G TCAACCATGTCAACA TERM 300 255440 - 255417 - gR 74 -4.5 -4.76041 | gap 1, overlap 255419 GATACTGATGAAAAA CGCCGTG-CG GCAGT CGACACGGGG ATCTCCCGGATGCTG TERM 301 255739 - 255726 - gR 95 -9.5 -4.72272 | overlap 255728 GCGCGTCAGCAAAAA GCGCC GCTT GGCGC GCTGCGTGAAATCTG TERM 302 256446 - 256436 - gR 71 -6.8 -4.11216 | overlap 256443 TCTGGAGCTGGAAAA CCAG AAC CTGG CAAACAGCAGCGCCA CKO_00264 256768 - 256631 - | hypothetical protein CKO_00262 251787 - 256721 + | hypothetical protein TERM 303 256744 - 256771 + Gg 79 -13.4 -2.7242 | overlap 256741 256739 TCCTGCGCAGTCTAC GCGGTGGCTGGC GCTG GCTGGCCATCGC TCCATTTCTGATGAT TERM 304 257826 - 257838 + GrH 71 -10.5 -2.64099 | overlap 257825 TTACAGGATGTGCCG CGCCG TAC CGGCG ATTATCGTCCGGGAA CKO_00263 256722 - 259034 + | penicillin-binding protein 1C CKO_00266 259533 - 259120 - | hypothetical protein CKO_00265 259183 - 259614 + | nucleoside diphosphate kinase CKO_00267 259687 - 259824 + | hypothetical protein TERM 305 259847 - 259807 - f 79 -11.2 -3.34501 | gap 2, opp_overlap 259808 259811, overlap 259798 259808 259811 ATAGAATTTGTACAA TGCAGCGCCCCAGGATGAGC ACC GCTCA-C-TGGGGCGCTTCT TTTTTCAACCCTCCA TERM 306 259808 - 259846 + F 100 -14.7 -5.02074 | gap 2, opp_overlap 259808 259807 259798 259811, overlap 259811 TAGAATTTGTACAAT GCAGCGCCCCAGGATGAGC ACC GCTCA-C-TGGGGCGCTTC TTTTTTCAACCCTCC TERM 307 259846 - 259808 - f 86 -14.7 -2.60219 | gap 2, opp_overlap 259808 259811, overlap 259807 259798 259811 TAGAATTTGTACAAT GCAGCGCCCCAGGATGAGC ACC GCTCA-C-TGGGGCGCTTC TTTTTTCAACCCTCC TERM 308 259843 - 259811 - f 90 -15 -2.59927 | gap 2, opp_overlap 259811 259808, overlap 259808 259807 259798 AATTTGTACAATGCA GCGCCCCAGGATGAGC ACC GCTCA-C-TGGGGCGC TTCTTTTTTCAACCC TERM 309 259811 - 259843 + F 100 -15 -4.61482 | gap 2, opp_overlap 259808 259807 259798 259811, overlap 259808 AATTTGTACAATGCA GCGCCCCAGGATGAGC ACC GCTCA-C-TGGGGCGC TTCTTTTTTCAACCC CKO_00268 259900 - 261066 + | hypothetical protein TERM 310 261073 - 261107 + F 74 -10.8 -3.25919 | overlap 261072 GCGGTCTGATACGGC TTGCGCCATTGTGTGT TTT GTGTACAGTGGCGCAA TGTTGGTTGAATGAT TERM 311 261981 - 261926 - g 100 -16.3 -3.87815 | gap 3 CTCTACGGCGACAAA CGCCGTGCCGCAGACGCCG-GATGCGTC CGC GACG-ACCACGGCGCCTGCCGCA-GACG CTCAGCAGAATGCGG CKO_00269 261357 - 262370 + | hypothetical protein TERM 312 263498 - 263480 - g 71 -10.2 -3.19642 | AGCATTATGGACGAA GCGCGTCG AAT CGACGTGC AGCAGGTTGAAAAAT CKO_00270 262397 - 263515 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 313 263524 - 263544 + F 82 -13.3 -3.00298 | opp_overlap 263520 263519 AAAATAATAACGCGA TGGGAAGCG GCG CGCTTCCCG TGTATGATTGAACCC TERM 314 263553 - 263598 + F 83 -6.1 -5.0916 | gap 1 CTTCCCGTGTATGAT TGAACCCGCATGGCT-CCCGTA TCG TTTGGGAAGCGCTGAGGGTTCA TTTTTATATTCAGAA TERM 315 263661 - 263636 - f 83 -6.1 -5.03747 | opp_overlap 263636 AAACGTGGCAAAAAA CATTCAAGCCA TTCG CGGCATGAACG ATTATCTGCCTGGCG TERM 316 263733 - 263717 - g 70 -3 -4.71061 | gap 1 AGGCACACTCAAAAA CGT-GCT CGGC AGCTACG GTTACAGTGAAATCC TERM 317 264068 - 264086 + G 71 -10.2 -3.20348 | GCTGATTCTGCTGAC CGCGCGCT GGT GGCGTGCG TTGGGTATTGCTGAA CKO_00272 263655 - 264899 + | histidyl-tRNA synthetase TERM 318 265249 - 265231 - g 76 -8.8 -3.93638 | AATGAACTTGAGAAA GCCGCAGC CCA GCTACAGC AAGGACTGGCGGCCA CKO_00273 264913 - 265533 + | hypothetical protein CKO_00274 265544 - 266722 + | outer membrane protein assembly complex subunit YfgL TERM 319 266743 - 266775 + F 100 -17.1 -3.90048 | opp_overlap 266749, overlap 266749 ACGGCCGCACGCTTT GAAAAACGGCTCCTG GTG CAGGGGCCGTTTTAC TGTTTTTAACAACGG TERM 320 266749 - 266769 + F 100 -14.7 -4.60746 | opp_overlap 266749, overlap 266743 GCACGCTTTGAAAAA CGGCTCCTG GTG CAGGGGCCG TTTTACTGTTTTTAA TERM 321 266769 - 266749 - f 100 -12.5 -4.57569 | opp_overlap 266743 266749 GCACGCTTTGAAAAA CGGCTCCTG GTG CAGGGGCCG TTTTACTGTTTTTAA TERM 322 266785 - 266810 + F 74 -8.3 -3.98747 | gap 1, opp_overlap 266788, overlap 266788 TTTTACTGTTTTTAA CAACG-GCGCAA AAA TCGCGCGCGTTG TTTGATGATTTTTTA TERM 323 267221 - 267199 - g 80 -5.6 -4.86731 | gap 1 TTGTGGCAAACAAAA CTGA-CGGG CTCGAT CCCGATCAG GCGGTTGTCGACTTC CKO_00275 266841 - 268313 + | GTP-binding protein EngA TERM 324 268335 - 268351 + F 100 -10.8 -6.11229 | opp_overlap 268335 CTGACGTTGATAAAA CCCGCG CCTGT CGCGGG TTTTTTTGTTTTGCT TERM 325 268351 - 268335 - f 93 -10.8 -4.38712 | opp_overlap 268335 CTGACGTTGATAAAA CCCGCG CCTGT CGCGGG TTTTTTTGTTTTGCT TERM 326 268658 - 268642 - g 95 -8 -4.96773 | opp_overlap 268638 TTAATCAAAAAGAAA GCCGAA CGTTC TTCGGC CATCCTTATCCGCTC TERM 327 269062 - 269052 - g 78 -2.4 -5.24531 | opp_overlap 269060 269061 ACGCTGTATAAAAAA GGCG ATG CGCG TCGTGACGGCGGTTT TERM 328 269160 - 269149 - g 71 -5.8 -4.25104 | opp_overlap 269149 GCTGGCTGATTAAAA GCCA CGGC TGGC ACTGGGGCTTTGGTA TERM 329 270156 - 270140 - g 74 -2.9 -4.86133 | TACACAGACTAAAAA TGAGCAG AAG CCGGTCA CTAACGCCTGATGCA CKO_00276 268614 - 270167 + | hypothetical protein TERM 330 270217 - 270173 - f 70 -10.1 -3.06133 | gap 2, overlap 270175 TAACGCCTGATGCAA CATCCGATCTGGCCGGGGCGT GAGTG ACGCCCCGG-CAGTTCA-ACG AACGAGACGGGAACA CKO_00277 270265 - 270513 + | hypothetical protein CKO_00278 271883 - 270510 - | exodeoxyribonuclease VII large subunit TERM 331 270573 - 270625 + g 71 -8.4 -3.90291 | gap 1, overlap 270587 CACTTCGCTTTCCAC CCAGCCGTCTGACAGCCGGGTGGTG AGCA CATCACC-GGCTTTCACCTGTCTGG TTTGCTTCAGCACCT TERM 332 272593 - 272579 - g 74 -4.2 -4.79667 | opp_overlap 272580 AAAATGCACGAAAAA CGCGTT GAG AAAGCG CTGGTTGTGGATGAC TERM 333 273045 - 273069 + G 71 -8.5 -3.86524 | overlap 273035 273049 AAGGCCTGGGCATTC CGGTTATCGCC GAT GGCGGTATTCG TTTCTCCGGCGATAT CKO_00279 272045 - 273511 + | inositol-5-monophosphate dehydrogenase TERM 334 273518 - 273540 + F 100 -14.9 -4.56113 | GGCTCCTGATTTTCT TCGCCCGAC CTCGT GTCGGGCGA TTTATTTAATCTGTT CKO_00280 273580 - 275157 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 335 275206 - 275225 + F 100 -10 -5.71295 | CAGATTCATCATTAG CCCTCTGT AATT GCAGAGGG TTTTTGTTTTTATGT CKO_00281 275429 - 275662 + | hypothetical protein CKO_00282 275693 - 276025 + | hypothetical protein CKO_00283 276352 - 276161 - | hypothetical protein CKO_00284 276370 - 276543 + | hypothetical protein TERM 336 276604 - 276625 + F 76 -2.3 -5.40014 | gap 1, opp_overlap 276607 276609, overlap 276607 GTTGATAACTAGAAT CAA-GACACA TAT TGTGACGTTG TTTTTATTATTATTT CKO_00285 276705 - 278954 + | hypothetical protein CKO_00286 280503 - 278962 - | exopolyphosphatase CKO_00287 282574 - 280508 - | polyphosphate kinase TERM 337 281808 - 281793 - G 76 -3.2 -4.99043 | gap 1, overlap 281794 281795 CGCTGATAAACAAAA CGCACCG GCT CGGCG-G TCAGGCGTTGTTTCA CKO_00288 282741 - 282574 - | hypothetical protein CKO_00289 283433 - 282795 - | phosphoribosylglycinamide formyltransferase TERM 338 283301 - 283323 + g 87 -13.5 -3.19463 | overlap 283304 CCTCACGCGCGCGTT CAAGGCCGA ACGCG TCGGCCTTG TTGCTGAATACTGCC TERM 339 283304 - 283320 + g 70 -9.4 -3.73914 | overlap 283301 CACGCGCGCGTTCAA GGCCGA ACGCG TCGGCC TTGTTGCTGAATACT CKO_00291 284245 - 283430 - | hypothetical protein CKO_00290 284228 - 284773 + | hypothetical protein TERM 340 285637 - 285685 + G 76 -10.9 -3.6707 | opp_overlap 285647 TTGCGCTGGATATCA CCGATGAAGATCGCGCGGCGCTG TTA CAGGGCTGTGTGGACTATATCGG TTTCAGCTATTACAT CKO_00292 284760 - 286190 + | 6-phospho-beta-glucosidase TERM 341 286210 - 286235 + F 81 -8.3 -4.51699 | gap 1, overlap 286212 CAATATGTTGTTATT CA-GCCCCGC CATCTGT GCGGGGCGTG TTTTATACTCATTCT TERM 342 286212 - 286232 + F 74 -11.1 -2.9043 | overlap 286210 ATATGTTGTTATTCA GCCCCGC CATCTGT GCGGGGC GTGTTTTATACTCAT CKO_00293 286374 - 287000 + | hypothetical protein TERM 343 287039 - 287017 - f 79 -7.7 -4.51994 | opp_overlap 287019, overlap 287019 TGAATGAATAATAAA GAGCCGACT TTAAG AGTCGGCTT TTTTTTGAATAAAAC TERM 344 287037 - 287019 - f 84 -10.3 -3.85474 | opp_overlap 287019, overlap 287017 AATGAATAATAAAGA GCCGACT TTAAG AGTCGGC TTTTTTTTGAATAAA TERM 345 287019 - 287037 + F 100 -11 -5.81412 | opp_overlap 287019 287017 AATGAATAATAAAGA GCCGACTT TAA GAGTCGGC TTTTTTTTGAATAAA TERM 346 287429 - 287418 - g 74 -7.2 -4.16842 | opp_overlap 287408 TTTATCGTGAAGAAA GCCG GAAC CGGC TGGCTGGACGTGATG TERM 347 288004 - 288018 + G 76 -5.6 -4.6902 | overlap 288007 288014 ACAGCACCTGGGTTA TCGGCG GCG CGGCGA TTTTTGCCATTCTGC CKO_00294 287088 - 288377 + | uracil transporter TERM 348 288386 - 288407 + F 93 -13.7 -3.56273 | opp_overlap 288386 GCAATAATCCTGAAA CCGGGCAGT GCTT GCTGCCCGG TTCTATCGTGATGGA TERM 349 288407 - 288386 - f 90 -13 -3.64049 | opp_overlap 288386 GCAATAATCCTGAAA CCGGGCAG TGCTTG CTGCCCGG TTCTATCGTGATGGA CKO_00295 288450 - 289175 + | DNA replication initiation factor CKO_00296 290533 - 289211 - | hypothetical protein TERM 350 289730 - 289748 + g 70 -6.6 -4.07568 | overlap 289731 GCTGCCAGGCTGCAT TGCGTTCG GGC CGATCGCG TTTTCAGCCAGCGCC TERM 351 290098 - 290076 - G 71 -6.2 -4.26903 | opp_overlap 290078 TGCAGCGCAGGAAAA GAGGCGCACA GGG TTTGTGCCTC ATTGACCACGAACTG TERM 352 290247 - 290271 + g 100 -5.7 -5.55698 | AACGCGGTGATATGG CGGATGCGA GTGGCGG TGGCATCCG TTTTTTTCAATTGTA TERM 353 290334 - 290322 - G 74 -4.7 -4.68724 | TGATTGAACAGAAAA CGCAG CAG CAGCG CCAGTACAGTGTCAT TERM 354 290379 - 290404 + g 72 -11.9 -2.64794 | gap 1, opp_overlap 290368 TCAATCAGCACATTT TCGCTGACTGGC GAG GCCAG-CAGCGG TCGTATCGCATTGAG CKO_00297 291597 - 290638 - | hypothetical protein CKO_00298 292173 - 291601 - | hypothetical protein TERM 355 291783 - 291767 - G 71 -4.3 -4.5442 | CCGGTAACGATAAAA CCGCTAA TGA CTGGCGG CAGCGTCCACGGAAT CKO_00299 292920 - 292198 - | hypothetical protein TERM 356 292852 - 292865 + g 77 -8.1 -4.07568 | opp_overlap 292839, overlap 292848 292846 AATCGCGCCGAGATG CCGCT GCTG AGCGG TTTTCGCCGCCAGAG TERM 357 293171 - 293153 - g 77 -3.8 -5.03715 | overlap 293163 AGCAGTCTGAAAAAA GCGACA GAGAGCT TGCCGC CGAGCTTGGGATTTC TERM 358 293717 - 293702 - g 71 -4.6 -4.65895 | GCCCGCAGCTAAAAA CGCACC TGGC GACGCG CGGTATGTCATGCCA CKO_00300 293080 - 293925 + | hypothetical protein CKO_00301 294281 - 293922 - | hypothetical protein CKO_00302 295988 - 294354 - | hypothetical protein TERM 359 294696 - 294714 + g 75 -5.9 -4.58283 | CTGCAATACCGGGTT TGCGCGC AGATC GCGGGCA TTTTTCAGACGGTTA CKO_00303 296043 - 297104 + | hypothetical protein TERM 360 297319 - 297333 + G 93 -4.9 -5.4756 | CAAAAAGTGGGGTGG GGCGG TTATC TCGCC TTTTTTATTACCATT CKO_00304 297190 - 297939 + | hypothetical protein TERM 361 297985 - 297999 + G 70 -7 -4.13767 | overlap 297988 GGATCTGTTTATCGA CGGCGC GCG GCGCGG TTTTACCATCGCCAC CKO_00305 297941 - 298402 + | hypothetical protein CKO_00306 298414 - 299577 + | isoaspartyl dipeptidase TERM 362 299630 - 299579 - T 71 -7.3 -4.1673 | opp_overlap 299581 299582, overlap 299567 299582 GAACGTTTGAATAAA CGA-CGCGTATGCCGGATGGCGGCG TAAA CGCCTT-ATCCGGCATACGGGGTTG TGCGAATCAGGCCTG TERM 363 299581 - 299627 + T 93 -14.5 -3.31144 | gap 1, opp_overlap 299579 299582, overlap 299582 ACGTTTGAATAAACG ACGCGTATGCCGGATGGCGGCG TAAA CGCC-TTATCCGGCATACGGGG TTGTGCGAATCAGGC TERM 364 299626 - 299582 - T 85 -13.6 -3.10244 | gap 1, opp_overlap 299582 299581, overlap 299579 CGTTTGAATAAACGA CGCGTATGCCGGATGGCGGCG TAAA CGCCTT-ATCCGGCATACGGG GTTGTGCGAATCAGG TERM 365 299582 - 299626 + T 100 -18 -2.58544 | gap 1, opp_overlap 299579 299582, overlap 299581 CGTTTGAATAAACGA CGCGTATGCCGGATGGCGGCG TAAA CGCC-TTATCCGGCATACGGG GTTGTGCGAATCAGG TERM 366 299673 - 299640 - T 76 -11.7 -2.70932 | opp_overlap 299641, overlap 299650 GGGTTGTGCGAATCA GGCCTGATAAGACGC GTTA GCGTCGCATCAGGCT TTATCCGGCAAAACG TERM 367 299641 - 299672 + T 95 -13 -3.85698 | opp_overlap 299640 299650 GGTTGTGCGAATCAG GCCTGATAAGACGC GTTA GCGTCGCATCAGGC TTTATCCGGCAAAAC CKO_00307 300163 - 299693 - | thioredoxin-dependent thiol peroxidase CKO_00308 300609 - 300163 - | hypothetical protein CKO_00309 300881 - 301759 + | dihydrodipicolinate synthase TERM 368 302635 - 302619 - g 90 -12.3 -3.92869 | GCAGTGACCTACAAA CCGCTGT CTG ACAGCGG CTGGCAGGATCTGGG CKO_00310 301776 - 302810 + | lipoprotein TERM 369 302819 - 302838 + F 100 -13.6 -5.34555 | opp_overlap 302818 302815 CAAGTAAAAATTGAG GGGCTGGA GCAA TCCAGCCC TTTTTTCTGATATGA CKO_00311 303000 - 303713 + | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 370 303735 - 303756 + F 100 -12.3 -4.96848 | opp_overlap 303735 CCCCGTCAGCATCAA CCGGAGAGT CAAC GCTCTCCGG TTTTTCTCTACCACC TERM 371 303756 - 303735 - f 79 -11.6 -3.21099 | opp_overlap 303735 CCCCGTCAGCATCAA CCGGAGAG TCAACG CTCTCCGG TTTTTCTCTACCACC TERM 372 303901 - 303926 + F 81 -8.1 -4.54727 | overlap 303902 303903 AGACGCAATAGCTCC GGCGGCCCGTC AATG GGCGGGCCGGG TTTTCGTTTGCCCAG TERM 373 303902 - 303925 + F 82 -11.6 -3.32354 | overlap 303901 303903 GACGCAATAGCTCCG GCGGCCCGTC AATG GGCGGGCCGG GTTTTCGTTTGCCCA TERM 374 303903 - 303924 + F 90 -15.1 -2.5893 | overlap 303902 303901 ACGCAATAGCTCCGG CGGCCCGTC AATG GGCGGGCCG GGTTTTCGTTTGCCC CKO_00312 303913 - 304707 + | hypothetical protein TERM 375 304941 - 304951 + G 90 -8.2 -4.7254 | overlap 304933 GCTGGGACGCGAGTT CCGC CAC GCGG TTTTTGATGCGCAGT TERM 376 305893 - 305918 + G 80 -8.9 -4.11216 | overlap 305892 CGTCGCATGATGGAT GCGCCGGGGCA GCAT TTTCTCGGCGC TTTTACGGCTGAGCG CKO_00313 304723 - 306738 + | hypothetical protein TERM 377 306715 - 306726 + F 79 -4.4 -5.09895 | TTACGCGAACGCGTT TTGC AATG GCAA TTTTTTCACTAACTC CKO_00314 306812 - 307510 + | esterase YpfH TERM 378 307562 - 307523 - T 77 -11.4 -3.18199 | gap 1, opp_overlap 307552 TAAGCCGGAACTGAA CCGTAGGCCGGATAG-GGC GAA GCCGCCATCCGGCATTCAG ACGGTATGTTGCCTG CKO_00315 307815 - 307615 - | hypothetical protein CKO_00316 308970 - 307843 - | succinyl-diaminopimelate desuccinylase TERM 379 308007 - 308025 + g 78 -6.7 -4.63007 | CGTCGGACGTTCCAC CCGTAGT GAGTA ACTGCGG TTTTATCTCATTATA CKO_00317 309330 - 308974 - | hypothetical protein CKO_00318 309851 - 309648 - | hypothetical protein TERM 380 309831 - 309873 + g 83 -12.2 -3.65314 | opp_overlap 309815 309842, overlap 309842 CCTGATCCTGAAAAG GATAAGAAAAAGGCGACTCA AAG TAAGTCGCCTTTTTTGTGTC TTATTCCGGCTTCGG TERM 381 309842 - 309862 + g 100 -9.7 -5.48787 | opp_overlap 309842, overlap 309831 AAAGGATAAGAAAAA GGCGACTCA AAG TAAGTCGCC TTTTTTGTGTCTTAT TERM 382 309862 - 309842 - G 100 -11.9 -5.25772 | opp_overlap 309842 309831 AAAGGATAAGAAAAA GGCGACTCA AAG TAAGTCGCC TTTTTTGTGTCTTAT CKO_00319 312987 - 309874 - | aminoglycoside/multidrug efflux system TERM 383 310774 - 310788 + g 79 -11.4 -3.62275 | opp_overlap 310771 310773 GTCGTCGATAGAGAC GCCCAG CGC CTGGGC TTTGCGCTGATCGAT CKO_00320 313118 - 312987 - | hypothetical protein TERM 384 313097 - 313082 - G 77 -4.8 -4.89054 | TGGAGAAAAAAAGAA GATAAT GTAA ATTATC ATGCACGTTTACAGC CKO_00321 314873 - 313173 - | nitrate/nitrite sensor protein NarQ CKO_00322 315016 - 314780 - | hypothetical protein TERM 385 314855 - 314832 - G 100 -5.2 -5.55698 | gap 1, opp_overlap 314833, overlap 314833 CACAATGTAAAAAAA GGCCCGGGCCA GGC TGGCC-GAGAC AGGGCGTTTGACGAC CKO_00323 315047 - 314898 - | hypothetical protein TERM 386 315019 - 315037 + gr 74 -10.2 -3.19157 | opp_overlap 315016 315014, overlap 315017 GGCAAATGAACATTG CCGACCCC TTC GGCGTCGG TTAATAACATTCATA CKO_00324 315601 - 315038 - | hypothetical protein TERM 387 315509 - 315499 - G 70 -6.8 -4.07568 | opp_overlap 315498 GGCCTGTGTTGAAAA CTGC CCG GCAG ATGCGTTGCAATTGG TERM 388 315578 - 315557 - G 74 -10.8 -3.53091 | overlap 315532 ACCCGGCTGTCGAAA GCGCGGCG TCTGCG CACCGCGC GTCAGGAAAATCAGC CKO_00325 315650 - 317065 + | hypothetical protein TERM 389 317266 - 317249 - g 78 -7 -4.59773 | TCTGACCCGTAAAAA TGGCGA TGTGAT TCGCCA TAAGCGCGAGGTTTA CKO_00326 317157 - 317732 + | hypothetical protein TERM 390 317882 - 317937 + G 71 -9.6 -3.52117 | gap 1, overlap 317906 317925 TCGCGTTATTTTCGT TTTCCTGCTCGGCCTGCTGCCGACGTC GCT GACGTGGGCGGC-GCCAGCGCAGCAGA CTTTTTCTGACTGGC TERM 391 317906 - 317938 + G 85 -7 -4.87665 | overlap 317882 317925 CGGCCTGCTGCCGAC GTC-GCTGACGTGGGC GGC GCCAGCG-CAGCAGAC TTTTTCTGACTGGCA TERM 392 318792 - 318814 + G 91 -9.9 -4.58773 | gap 1 TGCGGTATCCAGACG CGCTGG-CGT TTTG ACGGCCAGCG TTTTCGTTTGGTGCG TERM 393 318861 - 318884 + G 80 -12.4 -3.35798 | opp_overlap 318857 AGCTGCGATAACTGG CATGGGCCAG ATGC CTGGCCCACG TTGTGGATCACACGT CKO_00327 317859 - 318902 + | hypothetical protein TERM 394 318973 - 318961 - gT 70 -9.1 -3.30124 | overlap 318963 TTGTAGGCCGGATAA GACGC ATC GCGTC GCCATCCGGCTTCCG CKO_00329 320999 - 319005 - | transketolase CKO_00328 318912 - 319073 + | hypothetical protein TERM 395 319607 - 319646 + gT 72 -8.6 -3.72576 | gap 1 GCCCATCTTCACCCA GCCCGATAGAGTCGTGGGT ATA AACCATGA-TCTGCCGGGC TTTCATCAACGCCGC TERM 396 320697 - 320713 + gT 75 -5.7 -4.66163 | overlap 320698 320699 TGGCGTATAGCCGAT TTCCGGG TGT CCCGGCG TTTTTGAATGGAGCT TERM 397 320699 - 320711 + gT 71 -10.5 -2.63208 | overlap 320698 320697 GCGTATAGCCGATTT CCGGG TGT CCCGG CGTTTTTGAATGGAG CKO_00330 321970 - 321020 - | transaldolase A TERM 398 321479 - 321460 - G 95 -8.5 -5.04325 | overlap 321461 GCGAAACCAGAAAAA CGCCCGC TTCCGC GCAGGCG CGCGCCTGTGCAAAA CKO_00331 322216 - 322016 - | hypothetical protein TERM 399 323091 - 323078 - g 86 -3.7 -5.42862 | overlap 323079 AGATGGTGAAAAAAA TGGCG CGTG CGCCG ATGATCCTGGCGCTG TERM 400 324006 - 324027 + G 73 -8.7 -3.85698 | GGCGATGAACGCCTT GCTGTTGCC GAGC GGCAACACC TTTATCGCCGACACC CKO_00332 322249 - 324528 + | malic enzyme TERM 401 324549 - 324566 + F 100 -14.1 -5.68438 | CTTTAATTCATTCCG GCGCGGG GTTC CCCGCGC TTTTTTATTTCCTCC TERM 402 324875 - 324890 + G 70 -5.4 -4.43501 | TAGCCATGAAAGCCG CCGATG TTCA TATCGG TTTTCTCGATAGATT CKO_00333 324688 - 325023 + | hypothetical protein CKO_00334 325037 - 325516 + | hypothetical protein CKO_00335 325494 - 326183 + | hypothetical protein TERM 403 326311 - 326352 + G 74 -2.9 -4.87665 | gap 1, overlap 326313 GGGAATTGCTGGAAA GCCGCCATTTGCGCATCAAG TTT CTGGATGAGCAAG-GCCGTC TTTTTGTCGATGACG CKO_00336 326193 - 326996 + | hypothetical protein CKO_00337 326993 - 328009 + | phosphotransacetylase CKO_00338 328049 - 328339 + | hypothetical protein TERM 404 328383 - 328433 + F 86 -13.2 -3.30124 | opp_overlap 328376 328384, overlap 328384 328387 328412 CCGGAGAAGACGCAA ACGCGTCGCCATCCGGCAATGA GATGGCA TCGATGCCGGATGGCGCCTCGC TTATCCGGCCTACAG TERM 405 328432 - 328384 - f 100 -14.5 -3.79071 | opp_overlap 328383 328384 328387 328412, overlap 328376 CGGAGAAGACGCAAA CGCGTCGCCATCCGGCAATGA GATGGCA TCGATGCCGGATGGCGCCTCG CTTATCCGGCCTACA TERM 406 328384 - 328432 + F 95 -16.7 -2.57931 | opp_overlap 328376 328384, overlap 328383 328387 328412 CGGAGAAGACGCAAA CGCGTCGCCATCCGGCAATGA GATGGCA TCGATGCCGGATGGCGCCTCG CTTATCCGGCCTACA TERM 407 328387 - 328429 + F 90 -15.6 -2.5955 | opp_overlap 328376 328384, overlap 328384 328383 328412 AGAAGACGCAAACGC GTCGCCATCCGGCAATGA GATGGCA TCGATGCCGGATGGCGCC TCGCTTATCCGGCCT CKO_00339 328472 - 328771 + | hypothetical protein TERM 408 328857 - 328837 - g 70 -6.8 -4.19735 | TTGCTGAAAATGAAA GACAGCAG TCAAC CTGCCGCC GCCGTTCATGAAATG CKO_00340 328783 - 330186 + | hypothetical protein CKO_00341 330223 - 331062 + | hypothetical protein TERM 409 332064 - 332039 - g 88 -9.7 -4.46854 | gap 1 TTACTCAACAAGAAA GCGGACGATCGC GAC GCGATCGGC-GC AGTTAGCGAACTGAT TERM 410 332125 - 332102 - g 77 -7.3 -4.37092 | ACCGGGCTGACAAAA CGCCTCGCC GATGTT GGCGCGACG TCCGCGCATTACAGC CKO_00342 331052 - 332239 + | hypothetical protein TERM 411 332271 - 332321 + F 70 -8.8 -3.30124 | opp_overlap 332266 332267 332293, overlap 332272 GGCCCGATAAGGCGT TCGCGCCGCCATCCGGCAAAAACG CGG CACTATTGCCTGATGGCGCTGCGC TTATCAGGCCTACGA TERM 412 332272 - 332320 + F 78 -12.3 -2.57931 | opp_overlap 332266 332267 332293, overlap 332271 GCCCGATAAGGCGTT CGCGCCGCCATCCGGCAAAAACG CGG CACTATTGCCTGATGGCGCTGCG CTTATCAGGCCTACG TERM 413 332380 - 332398 + G 74 -7.5 -4.12857 | opp_overlap 332379 332380 332382 GGGAATTAATGAAAT CATCATG TACAT CATGATG TTCTTTATGCTGATT CKO_00343 332363 - 333589 + | hypothetical protein TERM 414 334669 - 334629 - g 75 -6.8 -4.46656 | gap 1 TCCACAAGATGAAAA CGAACTG-GTGGCCGCCTG GGAA CAGGCGCTGACTCAGCTCG ATCTCGACCCTGGCA CKO_00344 333586 - 334989 + | reactivating factor for ethanolamine ammonia lyase TERM 415 336347 - 336317 - g 80 -8.9 -4.21194 | gap 1, opp_overlap 336314 GGGCATTATGGAAAA CGG-TCGCCTGACC AAGC GGGCGGGCGATCCG TCACTGTTCTTCTGA CKO_00345 335001 - 336362 + | hypothetical protein TERM 416 336611 - 336632 + G 75 -12.3 -2.88544 | gap 1 GTTTTGGCCGAACTG CGC-CGCAGC ACC GCTGCGCGCG TGTGTACCGGTCGCG CKO_00346 336383 - 337288 + | ethanolamine ammonia-lyase small subunit TERM 417 337518 - 337547 + G 87 -8.5 -4.56314 | gap 1, overlap 337518 337519 TGTATGCCGGAGCGG C-CCACGGGCCGTC GCC GACGGCCGGTGAAG TTTTGATTATGTTGG TERM 418 337519 - 337545 + G 72 -12.2 -2.58538 | overlap 337518 337518 GTATGCCGGAGCGGC CCACGGGCCGTC GCC GACGGCCGGTGA AGTTTTGATTATGTT CKO_00347 337337 - 337957 + | hypothetical protein CKO_00348 337969 - 338466 + | hypothetical protein TERM 419 338479 - 338500 + F 93 -13.7 -3.58343 | gap 1 TAACCTGTCGGAGGT GCCGGGGACG TTG CG-CCCCGGC TTTGAAGATCATGAA TERM 420 339347 - 339335 - g 80 -9.1 -4.09685 | opp_overlap 339323 339335 339334 CCGCACGTTGCAAAA CGCGT TTC ACGCG ATTCTGGGGATTGGC TERM 421 339554 - 339522 - g 91 -9.7 -4.56597 | CTGTTTGCCGAAAAA CCGTCGCTGACGCTG CAT CAGCGTATGCGTCAG TGGATGTGATGACAT CKO_00349 338511 - 339563 + | transcriptional regulator EutR TERM 422 339585 - 339597 + T 70 -9.1 -3.30124 | opp_overlap 339572, overlap 339574 339583 TATTGTGCCGGATGC GACGC TTT GCGTC TTATCCGGCCTACGG TERM 423 339697 - 339669 - T 78 -6.6 -4.68593 | GTCACCAGGCAAAAA CGCGGCCAGGTA AATTA CACCCAGTCGCG GACTTTGATAAATTC CKO_00350 340582 - 339683 - | coproporphyrinogen III oxidase CKO_00351 341454 - 340585 - | N-acetylmuramoyl-l-alanine amidase I TERM 424 340653 - 340664 + g 71 -5.8 -4.3739 | overlap 340641 TCACGCCATTGGCTA TCGC GGTG GCGA TTTTCTGCCGGAATG TERM 425 340843 - 340855 + g 74 -4.8 -4.79223 | overlap 340842 AAGAATATGCGATCC CAGC GTCAG GCTG TTTTTGATGGTGTCG TERM 426 340899 - 340923 + g 77 -3.5 -5.00616 | opp_overlap 340894, overlap 340919 CGAACAATACCTGCT GCAACAGATGA TCT TTATCGGTCGC TTTTTTCCCCGCGAC CKO_00352 341474 - 341611 + | hypothetical protein CKO_00353 341666 - 342091 + | putative acetyltransferase CKO_00354 342078 - 342527 + | hypothetical protein CKO_00355 342618 - 343163 + | hypothetical protein TERM 427 343215 - 343238 + F 90 -9.6 -4.40561 | opp_overlap 343218, overlap 343212 343218 GTACAATACGCCCAT CAATGCCACG CAGC CGTGGCATTC TTATTTTTCAGGAGG TERM 428 343218 - 343235 + F 91 -11.3 -4.31587 | opp_overlap 343218, overlap 343215 343212 CAATACGCCCATCAA TGCCACG CAGC CGTGGCA TTCTTATTTTTCAGG TERM 429 343235 - 343218 - f 77 -11.3 -3.16668 | opp_overlap 343215 343212 343218 CAATACGCCCATCAA TGCCACG CAGC CGTGGCA TTCTTATTTTTCAGG CKO_00356 343258 - 344157 + | hypothetical protein CKO_00357 345558 - 344254 - | hypothetical protein CKO_00358 346993 - 345563 - | N-acetylmuramic acid phosphotransfer permease TERM 430 346103 - 346070 - G 71 -4.5 -4.58585 | gap 1, opp_overlap 346088, overlap 346074 CACCGAAACAAGAAA CAGACCCGCCAGAACG GCG CAGCCCAGCGGGT-TG CTGTTGAGGTGGATA TERM 431 346415 - 346397 - G 71 -12.4 -2.54723 | overlap 346396 346394 TCCCAACAGGAACAG CGAGGCGA TGA TCGCCCCG TTAACGCCGGTGCCG TERM 432 346950 - 346932 - G 79 -13.8 -2.74192 | opp_overlap 346926 346924, overlap 346929 CAGGTGGCAATATTA CCCGGGCC ACC GACCCGGG AGATAATCGTATTCA CKO_00359 347895 - 346999 - | N-acetylmuramic acid-6-phosphate etherase TERM 433 347767 - 347789 + g 70 -3.3 -4.71186 | opp_overlap 347766 347767, overlap 347769 GATCTCGGGCAGAAC CTGCTCCAC GGCGA GTGGAACCG TTTTATCTTCATCAT CKO_00361 348499 - 347909 - | hypothetical protein CKO_00360 347996 - 348541 + | hypothetical protein CKO_00362 349609 - 348524 - | hypothetical protein CKO_00363 349811 - 350674 + | hypothetical protein TERM 434 350825 - 350794 - f 79 -12.4 -2.85351 | gap 1, overlap 350797 350805 350807 TCGCTGGAGACGAGA GTAGCGCATAAGACG CAC CG-CTTATGCGCTGC AACAGACTGAAAAGG TERM 435 350822 - 350797 - f 78 -12.7 -2.68434 | gap 1, overlap 350794 350805 350807 CTGGAGACGAGAGTA GCGCATAAGACG CAC CG-CTTATGCGC TGCAACAGACTGAAA CKO_00364 350852 - 351643 + | short chain dehydrogenase TERM 436 351655 - 351681 + F 87 -10.9 -3.84992 | overlap 351676 351678 CTGATTAACGCCGCT TTCCTCCTCAC CGCAT GTGGGGAGGGA TTCTCTTATTCCCTT CKO_00365 351801 - 352817 + | thiosulfate transporter subunit TERM 437 353154 - 353167 + G 70 -6.7 -4.21812 | overlap 353136 CGGCGGTGGCGGGTC TGACG CTGG CGTCA TTGTTTTCCGTGAAC TERM 438 353240 - 353259 + G 74 -7.8 -4.08767 | ACTTACACCTGGCTT GGCATCGC GGTA GCGATGGC TTTTACCAGCATCCC CKO_00366 352817 - 353650 + | sulfate/thiosulfate transporter subunit CKO_00367 353650 - 354525 + | sulfate/thiosulfate transporter permease subunit TERM 439 354955 - 354941 - g 82 -11.4 -3.85698 | overlap 354944 TCTGGCGGGCAGAAA CAGCGC GTG GCGCTG GCGCGCGCGTTAGCG TERM 440 355568 - 355540 - g 70 -6.8 -4.07568 | gap 1, overlap 355564 TGTCGGGCTGCAAAA TGCGC-GGTTG TACAACGG CAACCAGCGCA TTGAGACGCGCGAAG CKO_00368 354515 - 355612 + | sulfate/thiosulfate transporter subunit TERM 441 355681 - 355706 + G 100 -11.1 -4.72272 | gap 1, opp_overlap 355695 ATATGATCTGCGTAG GCCCGGTAAGCG AAG CGCC-ACCGGGC TTTTTACTGGACAGA TERM 442 356030 - 356052 + G 81 -13.4 -2.88783 | opp_overlap 356011, overlap 356028 356032 GGAGCGCCGCGCGGC GATGCGCGCC TAT GGCGCGGATC TGATTCTGGTGTCTA TERM 443 356563 - 356579 + G 80 -12.3 -3.3353 | overlap 356562 356565 TGGTTGCGATCATCT GCGATCG CGG CGATCGC TATCTTTCTACCGGC CKO_00369 355668 - 356636 + | cysteine synthase B TERM 444 356701 - 356653 - T 100 -18.4 -3.30124 | gap 2, opp_overlap 356653 356697, overlap 356680 356682 CTGTAGGCCTGATAA GCGTAGCGCCATCCGGCAACCGTA AAG TACGATCGCCGGATGACG--ACGC AAAGCGTCTTATCCG TERM 445 356697 - 356709 + T 70 -9.1 -3.30124 | opp_overlap 356653 356680 356682, overlap 356653 CGATCGCCGGATGAC GACGC AAA GCGTC TTATCCGGCCTGCAA CKO_00370 357443 - 356727 - | glutamine amidotransferase CKO_00371 358749 - 357457 - | hypothetical protein TERM 446 358085 - 358120 + g 71 -4.6 -4.57569 | gap 1, opp_overlap 358104 358107, overlap 358108 CACCCCGTAGGATTG TGG-GCGCGCGGGGTTA AAA TGACGGCGCGGGCGCCA TTTTTCAGCGCCTGC TERM 447 358142 - 358104 - G 70 -6.5 -4.07568 | opp_overlap 358085 358108, overlap 358107 CGCGCGGGGTTAAAA TGACGGCGCGGGCGCCA TTTTT CAGCGCCTGCTCCAGCA TCTCAGGCTGCATAC CKO_00372 358832 - 359698 + | pyridoxal kinase CKO_00373 359695 - 359934 + | hypothetical protein CKO_00374 360121 - 359918 - | hypothetical protein TERM 448 360009 - 359966 - GT 100 -11.9 -4.57073 | gap 1, opp_overlap 359957, overlap 359946 359967 360008 GATGGCGGCGAAAAA CGCCTTATCCGGCCTACGAT CTTTT ATTGTAGGCCCGATAAG-CG CAGCGCCATCAGGCG TERM 449 360010 - 359967 - GT 82 -11.9 -3.33922 | gap 1, opp_overlap 359957, overlap 359946 359966 360008 ATGGCGGCGAAAAAC GC-CTTATCCGGCCTACGAT CTTTT ATTGTAGGCCCGATAAGCGC AGCGCCATCAGGCGC TERM 450 360010 - 360027 + gT 77 -8.3 -4.13767 | opp_overlap 360008 TAGGCCCGATAAGCG CAGCGCC ATCA GGCGCGG TTTTACCGTAACCAG TERM 451 360053 - 360070 + gT 100 -12.7 -4.65895 | opp_overlap 360053 ACCAGGATAAAAAAA TGGCGCC AGTC GGCGCCA TTTTTCCCTGCGGCA TERM 452 360070 - 360053 - GT 100 -12.7 -5.67967 | opp_overlap 360053 ACCAGGATAAAAAAA TGGCGCC AGTC GGCGCCA TTTTTCCCTGCGGCA CKO_00375 360599 - 360090 - | glucose-specific PTS system component TERM 453 360190 - 360206 + gr 74 -2.2 -5.06414 | opp_overlap 360185 GAGATAACAACCGGA GTCAGG GTAGA CTTGGC TTTTTCTTCCAGCAG CKO_00376 362367 - 360640 - | phosphoenolpyruvate-protein phosphotransferase CKO_00377 362669 - 362412 - | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) CKO_00378 362726 - 362851 + | hypothetical protein TERM 454 363000 - 363033 + T 73 -11.1 -2.62098 | opp_overlap 363009, overlap 363009 AAATTTGAAGCAGGC CACAAAAAAGCACCC AAAA GGGTGCTTTTTTACG CGTTTTTAACATGCT TERM 455 363024 - 363009 - T 100 -10.4 -5.26316 | opp_overlap 363000 363009 GCAGGCCACAAAAAA GCACCC AAAA GGGTGC TTTTTTACGCGTTTT TERM 456 363009 - 363024 + T 100 -10.4 -5.08011 | opp_overlap 363009, overlap 363000 GCAGGCCACAAAAAA GCACCC AAAA GGGTGC TTTTTTACGCGTTTT CKO_00379 364024 - 363053 - | cysteine synthase A TERM 457 363593 - 363613 + g 75 -3.9 -4.88067 | overlap 363595 363596 GTTAGCCGGGTTGCT GAACTGCTG AAG CAGCAGGTA TTTTTCTGGATCGCT TERM 458 364169 - 364150 - R 76 -9.2 -3.67775 | opp_overlap 364150 ACCTGGATGGAATAA GGAGCGGC ATAA GCCCCTCC TTTTTTATACAACTA TERM 459 364150 - 364169 + r 100 -9.2 -5.252 | opp_overlap 364150 ACCTGGATGGAATAA GGAGCGGC ATAA GCCCCTCC TTTTTTATACAACTA CKO_00380 364974 - 364213 - | putative sulfate transport protein CysZ TERM 460 365103 - 365069 - H 72 -3 -5.03747 | gap 1, opp_overlap 365078, overlap 365078 AAATGTTCGAAAAAA CAGCAAAAAGCACGA TTTCGT TCAT-CTTTATGCTG TGAAAGCCAAGAGCG TERM 461 365091 - 365078 - H 70 -2.3 -5.04265 | opp_overlap 365078, overlap 365069 AAAAAACAGCAAAAA GCACG ATTT CGTTC ATCTTTATGCTGTGA CKO_00381 365204 - 366229 + | cell division protein ZipA TERM 462 366241 - 366223 - f 85 -12.4 -3.33911 | overlap 366218 366215 AGTGAAAGAATCCAA CGCCTGAG AAA CCCAGGCG TGATCCCCCCTTTCT TERM 463 366260 - 366276 + F 100 -10.8 -5.38249 | TCCCCCCTTTCTGAA CCCCCG CCTGT CGGGGG TTTTTTATCATTGAT TERM 464 366533 - 366554 + G 74 -9.5 -3.72695 | TCGCCACGAAGTGCC CATGTTGTC GCTG GACAACGTG TTTGATGAAGAGAGT TERM 465 367825 - 367806 - g 75 -5.7 -4.57341 | overlap 367816 AATGCGCTGGAAAAA GCGAAAG AGACCA CCTTCGC GCGATTCCTCTATGC CKO_00382 366300 - 368315 + | NAD-dependent DNA ligase LigA CKO_00383 368317 - 368535 + | hypothetical protein CKO_00384 369530 - 368532 - | hypothetical protein TERM 466 369127 - 369110 - G 79 -3.3 -5.27335 | overlap 369111 GCGGCGAAAGAAAAA TCCCCAG CAGG CTGGAGG CCGATGCCGAACAGA TERM 467 369415 - 369396 - G 85 -4.8 -5.28176 | opp_overlap 369396, overlap 369398 GCCATGCATAAAAAA CAGCAGCG CAAT CGCGGCGG TGGTTAAGCCTTCAA TERM 468 369413 - 369398 - G 71 -6 -4.2748 | opp_overlap 369396, overlap 369396 CATGCATAAAAAACA GCAGCG CAAT CGCGGC GGTGGTTAAGCCTTC TERM 469 369536 - 369524 - G 74 -2.7 -4.93316 | overlap 369515 CAAGAATACGAAAAA GTTTC ATA AAAAC TCCTGAAAGTCGATG CKO_00386 369727 - 369527 - | hypothetical protein CKO_00385 369620 - 370546 + | hypothetical protein CKO_00388 370947 - 370537 - | hypothetical protein TERM 470 370686 - 370702 + gFH 76 -2.9 -5.11389 | TTTTAATTTGCGTCT GTATCAG TTC CTGCTGC TTTTGTTTCTCTTCT CKO_00387 370865 - 371062 + | hypothetical protein CKO_00389 371114 - 371947 + | purine nucleoside phosphorylase TERM 471 371984 - 371960 - f 70 -5 -4.52747 | gap 1, opp_overlap 371960 371963, overlap 371957 371963 371964 TAAAACACAAAATAA TAATGGCCCTG CTTG CAGGGCCG-TA CTTTACGGCAAGGAA TERM 472 371963 - 371982 + G 71 -11.4 -2.90496 | opp_overlap 371963 371960 371957 371964, overlap 371960 AACACAAAATAATAA TGGCCCTG CTTG CAGGGCCG TACTTTACGGCAAGG TERM 473 371982 - 371963 - g 84 -9.2 -4.30704 | opp_overlap 371960 371963, overlap 371960 371957 371964 AACACAAAATAATAA TGGCCCTG CTTG CAGGGCCG TACTTTACGGCAAGG TERM 474 371981 - 371964 - g 81 -12.7 -3.15982 | opp_overlap 371963 371960, overlap 371963 371960 371957 ACACAAAATAATAAT GGCCCTG CTTG CAGGGCC GTACTTTACGGCAAG CKO_00390 371962 - 373221 + | hypothetical protein TERM 475 373302 - 373265 - f 90 -14.3 -3.14564 | gap 1, opp_overlap 373274, overlap 373274 CCACTGGCGCACTAA CGGCTGAAACGGCGGG GCGACTG CCCGCCGTTTCAAC-G TCCCTGAGACAAATG TERM 476 373294 - 373274 - f 82 -11.1 -3.58037 | opp_overlap 373274, overlap 373265 CACTAACGGCTGAAA CGGCGGG GCGACTG CCCGCCG TTTCAACGTCCCTGA TERM 477 373274 - 373294 + F 82 -11.1 -3.57792 | opp_overlap 373274 373265 CACTAACGGCTGAAA CGGCGGG GCGACTG CCCGCCG TTTCAACGTCCCTGA TERM 478 373812 - 373762 - g 77 -3.9 -5.0133 | gap 1, overlap 373764 TATTTCGCGAAAAAA TGCCTGCGATGCAGATGGCGTTAC TGGA GCGACGCGAGCTGGAT-GCTGGCA TCTGGCGAATGGCGA CKO_00391 373362 - 374246 + | DNA-binding transcriptional activator XapR TERM 479 374285 - 374315 + F 86 -14.8 -2.51464 | opp_overlap 374292, overlap 374292 TAAATATCGCGCATA GCAAAAAGGCGCCT TTA GGGCGCCTTTTTAC ATTGGTGGGTCGTGC TERM 480 374308 - 374292 - f 100 -10.8 -4.8048 | opp_overlap 374292 374285 CGCGCATAGCAAAAA GGCGCC TTTAG GGCGCC TTTTTACATTGGTGG TERM 481 374292 - 374308 + F 100 -11.5 -4.7629 | opp_overlap 374292, overlap 374285 CGCGCATAGCAAAAA GGCGCCT TTA GGGCGCC TTTTTACATTGGTGG TERM 482 375711 - 375686 - g 74 -2.4 -5.06451 | GACGACGGTAAAAAA CTGTCCAAGC GTCATG GCGCGGTCAG CGTGATGCAGTATCG CKO_00396 374975 - 376390 + | glutamyl-tRNA synthetase TERM 483 376441 - 376401 - T 77 -11 -3.16921 | opp_overlap 376406 376420 376421 AGTAAGGTGTATTAA CCGTAGGCCGGATGGGGG TTGCG CCGCCATCCGGCCTGTTG CCCGATGGCGCTGCG TERM 484 376406 - 376436 + T 100 -19 -3.03124 | opp_overlap 376401, overlap 376420 376421 GGTGTATTAACCGTA GGCCGGATGGGGGT TGC GCCGCCATCCGGCC TGTTGCCCGATGGCG TERM 485 376420 - 376456 + T 79 -12.2 -2.82142 | opp_overlap 376401, overlap 376406 376421 AGGCCGGATGGGGGT TGCGCCGCCATCCGGC CTGTT GCCCGATGGCGCTGCG CTTATTGGGTCTACG TERM 486 376421 - 376457 + T 86 -10.9 -3.70773 | gap 2, opp_overlap 376401, overlap 376406 376420 GGCCGGATGGGGGTT GCGC--CGCCATCCGGC CTGTT GCCCGATGGCGCTGCGC TTATTGGGTCTACGA CKO_00397 376856 - 376467 - | hypothetical protein CKO_00398 377220 - 376858 - | hypothetical protein TERM 487 377642 - 377661 + H 100 -11.4 -5.4251 | CCACCAAAATTTGAA CCCTCGCT GAAA AGCGGGGG TTTTTTGTATCTGCA TERM 488 378099 - 378109 + G 74 -6.8 -4.30995 | TCCCGTTAATGCAGG CAGC GGT GCTG TTATTTTGTCAGACC CKO_00401 377843 - 380041 + | hypothetical protein TERM 489 380065 - 380047 - T 100 -11.7 -5.65177 | ACAGCTATAAAAAAA CCGGGGA ACATG TCCCCGG TTGCGCGTCGTAAGG CKO_00402 381309 - 380122 - | hypothetical protein TERM 490 380209 - 380198 - G 71 -5.8 -4.3467 | opp_overlap 380198 AGTTTCAGACCAAAA CGTG AAAC CACG TTGCCTTGCTCTTCG TERM 491 380716 - 380695 - G 74 -7.3 -4.12397 | TGACAGAACGATAAA GGTGCTGAA CATG TTCAGAACC AGCGCCGCAACGACA TERM 492 381128 - 381104 - G 70 -7.1 -4.07568 | CCTTCGTTGGCAAAA CCGAGCAGTTT TTC AAACATCTCGG AGAAACCTTTCACGA CKO_00403 381631 - 381476 - | hypothetical protein TERM 493 381639 - 381624 - G 83 -7.6 -4.55673 | opp_overlap 381624 AAACATAGCATAAAA CATAGC AAAG GCTATG TTTCTGAGGCAAAAG CKO_00404 381637 - 382893 + | manganese transport protein MntH TERM 494 383002 - 382956 - T 84 -7.5 -4.83615 | gap 1, opp_overlap 382969, overlap 382969 383001 TATTGCTGATAAAAA CACAATTCGAAAATAGCCCCGT TTGA ACGGGGCTATTTTT-AATGACG GTGTCCGTGACCCCG TERM 495 382990 - 382969 - T 100 -14.5 -4.2361 | opp_overlap 382969, overlap 382956 AACACAATTCGAAAA TAGCCCCGT TTGA ACGGGGCTA TTTTTAATGACGGTG TERM 496 382969 - 382990 + T 100 -14.5 -4.72986 | opp_overlap 382969 382956 AACACAATTCGAAAA TAGCCCCGT TTGA ACGGGGCTA TTTTTAATGACGGTG CKO_00405 383236 - 382994 - | hypothetical protein TERM 497 383050 - 383062 + g 71 -10.5 -3.2048 | GATCGCGCCAGCCTT CGCGG TAG CCGCG TTCATAGGCTTTGCG TERM 498 383111 - 383123 + g 71 -4.8 -4.59853 | ATAGCCATTATCGTG TCGC CACCA GCGA TTTTTACGCCATTCA TERM 499 383366 - 383383 + G 74 -9.8 -3.76492 | opp_overlap 383366 383363 383361, overlap 383369 GTTAACGCAATATTA CGGGGC GGTAAA GCCCCG TTTCATCGCCTTAAC CKO_00406 383241 - 383411 + | hypothetical protein CKO_00408 384437 - 383439 - | hypothetical protein TERM 500 383506 - 383494 - Gf 78 -5.5 -4.82901 | TCGGCGGGAGAAAAA TGACG ATT CGCCA GCATCCCCACGGCAT TERM 501 384301 - 384283 - Gf 74 -6.6 -4.3467 | opp_overlap 384294, overlap 384286 ATTCCCAGATCAAAA GCACGCTG TAG CAGCGCCC GGCTGTTCTCTACCT CKO_00407 384350 - 384514 + | hypothetical protein TERM 502 385767 - 385793 + G 100 -15.8 -3.67296 | opp_overlap 385752 385770, overlap 385770 TCCTTGCCGATCAGG GAACCGCCGCGT TTG GCGCGGCGGATC TTTCACTGCCTGCTG TERM 503 385790 - 385770 - g 91 -15.4 -3.09516 | opp_overlap 385767 385770 TTGCCGATCAGGGAA CCGCCGCG TTTGG CGCGGCGG ATCTTTCACTGCCTG TERM 504 385770 - 385790 + G 85 -16.1 -2.6462 | opp_overlap 385770, overlap 385767 TTGCCGATCAGGGAA CCGCCGCGT TTG GCGCGGCGG ATCTTTCACTGCCTG CKO_00409 384620 - 386275 + | hypothetical protein CKO_00411 387500 - 386289 - | hypothetical protein TERM 505 387058 - 387020 - Gf 71 -5.9 -4.36914 | gap 1 GGGTTTGCGAGAAAA TCAGCGCGGCG-GCGACA GGGG TGCCGAACAGCGCGCCGA TAGTGCCTGCGGAAG CKO_00410 387472 - 387612 + | hypothetical protein TERM 506 388511 - 388529 + G 71 -10.2 -3.20769 | CGGCGTCTACATTGC GGGCGGCA TCG TGCCGCGC TTCCTGGAGTTCTTT CKO_00412 387729 - 388694 + | glucokinase TERM 507 388782 - 388766 - f 93 -13.7 -3.53444 | opp_overlap 388766 TTATCCGGTCTTAAA CCGCGTC ACT GACGCGG TTTTTTTGTGCCCGT TERM 508 388766 - 388782 + F 100 -13.7 -5.61596 | opp_overlap 388766 TTATCCGGTCTTAAA CCGCGTC ACT GACGCGG TTTTTTTGTGCCCGT CKO_00413 388864 - 389259 + | hypothetical protein CKO_00414 389280 - 390527 + | hypothetical protein TERM 509 390643 - 390657 + G 74 -3.4 -4.96501 | overlap 390644 CCGCATTTGGGGATT TCCAGC AGC GCCGGG TTTGTTTTTATCACG CKO_00415 390514 - 391629 + | aminopeptidase TERM 510 391686 - 391650 - g 77 -8.1 -4.08216 | gap 1 TTATCGCTGTTAAAA GCCCTGAGCGAGGC GGATGCCATT GCCTC-CTCAGAGC AGGAAGTGCGCCAGA CKO_00416 391629 - 392666 + | exoaminopeptidase CKO_00417 392693 - 395188 + | hypothetical protein CKO_00418 396264 - 395407 - | hypothetical protein TERM 511 396015 - 396066 + g 100 -4.2 -5.75342 | gap 1, opp_overlap 396037, overlap 396017 396019 CGCTACCGGGCAGGT TTGC-CGCCCTGGCGGGGATGAACA GCA TCTCCCCCTCCGTCAGGGCGTGCTG TTTTTTTTCGAGCAG TERM 512 396017 - 396064 + g 89 -9 -4.52949 | gap 1, opp_overlap 396037, overlap 396015 396019 CTACCGGGCAGGTTT GC-CGCCCTGGCGGGGATGAACA GCA TCTCCCCCTCCGTCAGGGCGTGC TGTTTTTTTTCGAGC TERM 513 396019 - 396061 + g 71 -10.4 -3.19967 | opp_overlap 396037, overlap 396017 396015 ACCGGGCAGGTTTGC CGCCCTGGCGGGGATGAACA GCA TCTCCCCCTCCGTCAGGGCG TGCTGTTTTTTTTCG CKO_00419 397013 - 396279 - | hypothetical protein CKO_00420 398707 - 397028 - | hypothetical protein TERM 514 397857 - 397878 + g 70 -6.7 -4.17023 | GGCGTGCGGTGCGCT TCATCATTG TTTT TAATGATGA TTTTCCCGTAATTGA TERM 515 398490 - 398479 - G 72 -2.2 -4.87133 | ACGGGCCAAACAAAA TGCC CCCG GACA TCACGGCGATGATAC TERM 516 398589 - 398575 - G 70 -5.6 -4.4727 | CGAACATCGAGAAAA TCGCGG TAA CGGCGA GCAGCTCTTTCGGGG TERM 517 399334 - 399347 + G 71 -9.5 -3.53091 | GGTTACTCGACCTCA CGCGG GATC CCGCG TTTACGCCGGGCGAT TERM 518 400039 - 400027 - g 76 -9.1 -3.99324 | GCTGAGCAGTATAAA CGTCG CCG CGACG TACTGGTGAAAGGCT CKO_00421 399115 - 400353 + | aminotransferase TERM 519 400387 - 400358 - T 86 -9.3 -4.4767 | opp_overlap 400363, overlap 400363 GTACCGAGTAGAAAA GCAAACAGGAGCC ATCT GGCTCCTGTTTTT TGCTGCATCTTTTCA TERM 520 400382 - 400363 - T 100 -13.6 -4.28487 | opp_overlap 400363, overlap 400358 GAGTAGAAAAGCAAA CAGGAGCC ATCT GGCTCCTG TTTTTTGCTGCATCT TERM 521 400363 - 400382 + T 100 -13.6 -5.17353 | opp_overlap 400363 400358 GAGTAGAAAAGCAAA CAGGAGCC ATCT GGCTCCTG TTTTTTGCTGCATCT TERM 522 400851 - 400840 - T 90 -7.2 -5.4505 | opp_overlap 400840 CCGGGCAATAAAAAA GGCC TTGC GGCC TTTTTTAAACATACA TERM 523 400840 - 400851 + T 85 -7.2 -5.03314 | opp_overlap 400840 CCGGGCAATAAAAAA GGCC TTGC GGCC TTTTTTAAACATACA CKO_00422 401776 - 400856 - | lipid A biosynthesis palmitoleoyl acyltransferase CKO_00423 402134 - 401979 - | hypothetical protein CKO_00425 402440 - 402297 - | hypothetical protein CKO_00424 402288 - 402443 + | hypothetical protein TERM 524 403491 - 403460 - g 76 -5 -4.82162 | overlap 403462 403463 GATAACAATATAAAA GACGCCAGCAATGC ACTG GCATGGATGACGGC GGCTGATTTTGTTGG TERM 525 403877 - 403861 - g 83 -10.1 -4.10188 | opp_overlap 403872 CAGACTGACAAACAA CGGCACC CTT GGTACCG CAGGTAATACTTATC TERM 526 404897 - 404884 - g 74 -4.5 -4.77036 | gap 1 TTCTACTATCAAAAA CGC-GG CCT CCAGCG TTCAGGACGCGTCAA TERM 527 405682 - 405668 - g 70 -2.7 -4.72188 | opp_overlap 405669, overlap 405669 GCAATTGAAAACAAA GCCGC GATTA GCGGT ATTCAGTTGAAAAAT CKO_00426 402695 - 409654 + | hypothetical protein TERM 528 409661 - 409677 + F 100 -11.5 -5.00895 | opp_overlap 409661 TTTAAATAGCAGAAA GGGGGCG TCG TGCCCCC TTTTTCTGTCGTGAG TERM 529 409677 - 409661 - f 87 -10.8 -4.1043 | opp_overlap 409661 TTTAAATAGCAGAAA GGGGGC GTCGT GCCCCC TTTTTCTGTCGTGAG TERM 530 409889 - 409900 + G 84 -5.8 -5.08824 | opp_overlap 409889 409887 GCTTGATACTGAAGA GGCA AAGA TGCC TTTTTTCCATGAACC TERM 531 410013 - 409999 - g 70 -2.8 -4.72272 | CGCTGCTATCAAAAA CGAAAT CTC ATCCCG CTGTCAGACGGAAGC TERM 532 410196 - 410179 - g 74 -4.9 -4.73613 | TGAGCATCAATAAAA CAACAAA GTTT TTCGTTG AGTATCTGGCCTGGC CKO_00427 409752 - 410333 + | hypothetical protein TERM 533 411485 - 411473 - g 71 -4.8 -4.59773 | GTTGAGTTTCAAAAA CGCT TGCCC AGCG ATGTAAAACTGACGC TERM 534 411835 - 411855 + G 87 -8.3 -4.58773 | opp_overlap 411835 ACAACAGGGGAATTA CTGGTCAAT GCC ATTGTCCAG TTTTCATTTAATGCA CKO_00428 410396 - 411907 + | hypothetical protein TERM 535 411974 - 411940 - T 93 -15.2 -2.9176 | opp_overlap 411929 411941 411943, overlap 411943 AACTTTATCGATATA TCATGCGCATATTACC CGG AGTAATATGCGCATGT ATATATCAGGACTTA TERM 536 411941 - 411973 + T 100 -18 -2.99319 | opp_overlap 411940 411943, overlap 411929 411943 ACTTTATCGATATAT CATGCGCATATTAC CCGGA GTAATATGCGCATG TATATATCAGGACTT TERM 537 411971 - 411943 - T 90 -15.5 -2.7035 | opp_overlap 411943 411941 411929, overlap 411940 TTTATCGATATATCA TGCGCATATTACC CGG AGTAATATGCGCA TGTATATATCAGGAC TERM 538 411943 - 411971 + T 88 -14.8 -3.05022 | opp_overlap 411940 411943, overlap 411941 411929 TTTATCGATATATCA TGCGCATATTAC CCGGA GTAATATGCGCA TGTATATATCAGGAC TERM 539 412081 - 412092 + T 82 -3 -5.55664 | ACCACGGATTACCGC CATT GCTG AATG TTTTTTTACTCGTCA CKO_00429 412532 - 412098 - | hypothetical protein CKO_00430 414442 - 412547 - | hypothetical protein TERM 540 412940 - 412954 + g 85 -4.2 -5.2166 | GTCAGCGAACTGACC GGCC TGAATAC GGCC TTTTTTACCTTCTTC TERM 541 413606 - 413617 + g 71 -5.8 -4.23674 | GGAGCGGGTCCAGTT GAGG AAAT CCTC TTTCTCTTCCTGGGG TERM 542 414027 - 414011 - G 71 -7.2 -3.98661 | GAGATGCAGCAGAAA CACCGG GGTGT CCGGCG CAATGGCGTTGATCT TERM 543 414247 - 414259 + g 73 -9.1 -3.85165 | GGTTATCAATCAGCC CGGGT AAT ACCCG TTTGCCTTTCAGGTC CKO_00431 414717 - 414439 - | hypothetical protein TERM 544 414760 - 414736 - R 79 -12.2 -2.82834 | opp_overlap 414727 GACCTCATCAGGACA GGCGCAATGC GTGGT GCATTACGCC TGCCGTAAATCAGTT CKO_00432 415463 - 414783 - | hypothetical protein TERM 545 415340 - 415350 + g 73 -5.4 -4.67353 | overlap 415326 CCGCTTTGGCCAGGC CAAC AAC GTTG TTTTTCAGTACCTGA CKO_00433 415533 - 415703 + | hypothetical protein TERM 546 415793 - 415805 + F 72 -2.7 -4.97666 | CACTGTCTTTTAAAA TGTGA CAA TCATA TTTTTCTCATGTCTT TERM 547 416539 - 416553 + G 73 -5.6 -4.57353 | overlap 416540 CGCCTTCTGAACTGG CGCAGC ATA GCTGCC TTTTGTATGGTCGGG TERM 548 416667 - 416703 + G 74 -3 -4.98255 | opp_overlap 416676, overlap 416660 416669 GACGTGATCCGCGAG GCCGCAGAAGCG GGGGCCGGTATTG CGCTTTTGCCGC TTTTTATCGTTGAAG CKO_00434 415989 - 416891 + | hypothetical protein CKO_00435 417627 - 418628 + | hypothetical protein TERM 549 418667 - 418646 - f 82 -7.9 -4.64861 | opp_overlap 418646 TTTGTTGAAAAGAAA CCCCTGCAC AAAA ATGCGGGGG TTTTTAAATGATGAT TERM 550 418646 - 418667 + F 89 -9.4 -4.68994 | opp_overlap 418646 TTTGTTGAAAAGAAA CCCCTGCA CAAAAA TGCGGGGG TTTTTAAATGATGAT CKO_00436 418659 - 418844 + | hypothetical protein CKO_00437 419013 - 421556 + | cAMP phosphodiesterase TERM 551 422555 - 422543 - g 74 -3.3 -4.83615 | overlap 422546 GAGTCCGCAGAAAAA GTACG AAA CGTTC GATCGTGGTATATCG CKO_00438 421553 - 423115 + | hypothetical protein TERM 552 423150 - 423120 - T 100 -9.8 -5.31275 | opp_overlap 423113 423121, overlap 423121 TCGCAGGATAAAAAA GCAGGCGAATAC CTTATTC GTATTCGCCTGT TATTGAATTATTTGC TERM 553 423149 - 423121 - T 95 -13.3 -3.78042 | opp_overlap 423113 423121, overlap 423120 CGCAGGATAAAAAAG CAGGCGAATAC CTTATTC GTATTCGCCTG TTATTGAATTATTTG TERM 554 423121 - 423149 + T 95 -13.3 -3.7956 | opp_overlap 423121 423120, overlap 423113 CGCAGGATAAAAAAG CAGGCGAATAC CTTATTC GTATTCGCCTG TTATTGAATTATTTG CKO_00439 424585 - 423158 - | hypothetical protein TERM 555 424128 - 424140 + g 100 -9.1 -5.2112 | ATCTCTTTTTCATTA CCCAG CGT CTGGG TTTTTTCGTCATATT TERM 556 424610 - 424627 + r 76 -8.5 -4.10657 | opp_overlap 424610 424609 424607 GTATATGATAAATAG TTTCGAC GAAT GTCGAAA TTTTCGAAGATGTAA CKO_00440 425234 - 425097 - | hypothetical protein TERM 557 425232 - 425255 + g 89 -3.1 -5.6473 | AACAACATTCATCAG CATGGTCAC CTTTAC GTAACCGTG TTTTTTTCATGTTAT CKO_00441 425264 - 426814 + | hypothetical protein TERM 558 426832 - 426818 - T 79 -4.3 -5.19251 | CAAGAGGAATAAAAA TAAGC GTTCA GCTTA TACCGTCTGGTGAAT CKO_00443 428069 - 427137 - | hypothetical protein CKO_00444 428152 - 427982 - | hypothetical protein TERM 559 428167 - 428157 - H 73 -2.4 -5.12707 | opp_overlap 428157, overlap 428147 TGAAATCGCAAAAAA GGCG ACG CGCG TTTTTACCCGCCCGG CKO_00445 428262 - 429113 + | hypothetical protein TERM 560 429154 - 429135 - T 100 -12.2 -5.46657 | opp_overlap 429135 GAGGCCAATAAAAAA GGTGAGTC AAAA GACTCACC TTTTTTTACGTCTGA TERM 561 429135 - 429154 + T 100 -12.2 -5.50499 | opp_overlap 429135 GAGGCCAATAAAAAA GGTGAGTC AAAA GACTCACC TTTTTTTACGTCTGA CKO_00446 430531 - 429176 - | long-chain fatty acid outer membrane transporter CKO_00447 430939 - 431181 + | hypothetical protein TERM 562 431196 - 431222 + F 100 -14.5 -4.26344 | ATCCCCTTCTTTGAA TGCCCCTGTCA AATTC TGGCAGGGGCA TTTTCGTAACCCTCT TERM 563 431821 - 431806 - g 74 -7.5 -4.1822 | GTGGACGTCAATAAA GCCCG CACGAC CGGGC AAAAACTCAAACTCT CKO_00448 431359 - 432669 + | 3-ketoacyl-CoA thiolase TERM 564 433286 - 433300 + G 71 -10 -3.57792 | opp_overlap 433281 GGCGATTAAAGGGCG TTCCGC TCA GCGGAA TTTGCCGGTGCGTGA TERM 565 433406 - 433387 - g 85 -9.2 -4.39002 | AAACCGGGCAGAAAA CGCAGGGT AATT ACCCGGCG ACAGAGCGAATCCTT TERM 566 433588 - 433560 - g 78 -2.1 -5.16572 | overlap 433563 ACCGAAGTGAAAAAA GATCCGGGGAGCG ATG CGCAGCCTGGCCC GTTAGCCAGCGTAGG TERM 567 434466 - 434454 - g 93 -4.8 -5.46698 | CGTAAAAGCAAAAAA CAGG TCGAC CCTG CAATTTATAGGCTTA CKO_00449 432669 - 434816 + | multifunctional fatty acid oxidation complex subunit alpha CKO_00451 435046 - 434915 - | hypothetical protein TERM 568 434941 - 434954 + gF 74 -3.1 -4.91109 | gap 1, opp_overlap 434934 434941 ATGGATAAGGCACAA TGCCGG CCA CCG-CA TTTTTATCATACCCG CKO_00450 435023 - 435508 + | phosphohistidine phosphatase CKO_00453 435782 - 435561 - | hypothetical protein CKO_00452 435524 - 435655 + | hypothetical protein TERM 569 435657 - 435670 + gT 71 -9.5 -3.23274 | opp_overlap 435657 435656 CGCAGGCCGGATAAG GCGCC TGAT GGCGC TTCGCTTATCAGGCC CKO_00454 436309 - 435758 - | hypothetical protein TERM 570 436282 - 436296 + g 95 -5.6 -5.34655 | overlap 436284 ACAACGCCTGGTCCT CCTCGC TGA GCGATG TTTTCTTTTTCATTC TERM 571 436284 - 436294 + g 74 -6.8 -4.26857 | overlap 436282 AACGCCTGGTCCTCC TCGC TGA GCGA TGTTTTCTTTTTCAT CKO_00455 436475 - 437407 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase CKO_00456 437446 - 438531 + | chorismate synthase CKO_00457 438535 - 439359 + | penicillin-insensitive murein endopeptidase TERM 572 439835 - 439853 + G 77 -8 -4.09685 | overlap 439833 439844 439845 CTACGATGGCTTCTT CGGCCCGG CTG CCGGATCG TTTTACGCGCTGGCG CKO_00458 439359 - 440168 + | hypothetical protein TERM 573 440627 - 440612 - g 73 -5.4 -4.60487 | GAGTACCTGGAAAAA GGCATT CCTG AACGCC CGGCCCGGTTTATTA CKO_00459 440168 - 440716 + | hypothetical protein CKO_00460 440749 - 441027 + | hypothetical protein TERM 574 441027 - 441050 + T 76 -8.1 -4.19238 | overlap 441028 GGCCATTAACGCGTA GGCCGGATG CGTCGC CATCCGGCA TTTTCACCTTGCCGG TERM 575 441028 - 441049 + T 78 -11.6 -3.11222 | overlap 441027 GCCATTAACGCGTAG GCCGGATG CGTCGC CATCCGGC ATTTTCACCTTGCCG TERM 576 441077 - 441095 + T 80 -9.6 -3.92832 | CCGGGTGGCGTTAAC GTTCATCC AAC GGATGGAC TTATTTCACCGCTTT CKO_00461 443156 - 441096 - | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 577 441413 - 441382 - G 75 -13 -2.63102 | gap 1, opp_overlap 441381 441379 441388 ACCATCGGCAGATGA TCGCGC-GTGGCGCA GCG TACGCCACAGCGCGC CGCTTTTTCGCTGAT TERM 578 441388 - 441416 + g 76 -5.3 -4.69664 | opp_overlap 441382, overlap 441381 441379 GGCAGATGATCGCGC GTGGCGCAGC-GT ACGCC ACAGC-GCGCCGC TTTTTCGCTGATATC TERM 579 442290 - 442251 - G 72 -12 -2.57132 | opp_overlap 442239, overlap 442223 442250 442265 GCCGCGGCGCAGAAG CGCCAGCGACAGCAGCGC GCTG GCGATGCCGCCGCCGATG ATTGCGACGTCTCGT CKO_00462 443255 - 444475 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 580 444564 - 444581 + T 100 -9.1 -5.87996 | TATCAGGCCTACAGG GGAGCCG ATAA TGGCTCC TTTTTTTATTGCTTG CKO_00463 445111 - 444587 - | hypothetical protein TERM 581 445389 - 445401 + G 86 -7.7 -4.82154 | GAAAAAACACCTTCT GCGAA TTT TTCGC TTTTTCGTATCGCTT TERM 582 445411 - 445422 + G 75 -3.6 -4.8667 | TTTCGCTTTTTCGTA TCGC TTTT GCGG TTTTTCTGACCTATA TERM 583 445825 - 445851 + G 89 -13.6 -3.59233 | overlap 445822 445826 ATGGCATGGCGATTT ACGGCGCGCTGG CTG CCGGTGCGCCGC TTGGTTTACTGATTC TERM 584 445826 - 445850 + G 91 -17.1 -2.74817 | overlap 445825 445822 TGGCATGGCGATTTA CGGCGCGCTGG CTG CCGGTGCGCCG CTTGGTTTACTGATT CKO_00464 445353 - 446531 + | hypothetical protein CKO_00465 447532 - 446528 - | flagella biosynthesis regulator TERM 585 447272 - 447290 + g 70 -3 -4.77165 | overlap 447260 447273 GTTCTGCTGAGCGAC GCTCAGGC GTT GCGTGAGA TTTTGTTCTGCGGCG TERM 586 447311 - 447336 + g 71 -4.6 -4.56775 | opp_overlap 447327, overlap 447297 TTCTGCGGCGGGGAA GTGACGCGAC AGTAAC GGCGTGTCGC TTTTTACGCCCAGAT CKO_00466 447632 - 448768 + | hypothetical protein TERM 587 448782 - 448804 + F 95 -12.7 -4.04579 | overlap 448789 AACATTCTTTTTGTC GCTCCCTGC ATAGC GCGGGGAGC TTTGCTATTTCTGGA TERM 588 449023 - 449039 + G 90 -5.7 -5.28176 | CTGATTTTGACTGGA CGCAGGC GCA GCTGGCG TTTTTTGTCGCTGGC CKO_00467 448830 - 449843 + | putative semialdehyde dehydrogenase CKO_00468 449843 - 450655 + | tRNA pseudouridine synthase A CKO_00469 450679 - 451338 + | hypothetical protein TERM 589 451350 - 451362 + F 77 -3.3 -5.24531 | opp_overlap 451350 ATAGAAAGTAACTCA GCGGT TCG ACCAC TTTTTTATCCAAAGT CKO_00470 451491 - 452405 + | acetyl-CoA carboxylase subunit beta TERM 590 452438 - 452416 - f 93 -14.8 -3.34962 | opp_overlap 452416 CCTGATAGCTGATAA GGGCAGGGCC ACT GGCGCTGCCC TTTTGCTTTTCTCAA TERM 591 452416 - 452438 + F 100 -14.8 -4.73108 | opp_overlap 452416 CCTGATAGCTGATAA GGGCAGGGCC ACT GGCGCTGCCC TTTTGCTTTTCTCAA TERM 592 452499 - 452523 + G 93 -11.3 -4.38927 | AAACGCATTCCCCAA GCCGCGTCGCC CCT GGCAGCGTGGC TTTCTTATCTGGAAA TERM 593 453617 - 453597 - g 71 -9.7 -3.55548 | GAACATCTGGGCAAA GGCACTGTC TAT GACAGTGTC GCGCTGGCGTGGCAT CKO_00471 452475 - 453743 + | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 594 454129 - 454105 - g 87 -13.5 -3.16742 | CCGAAGCCGCAGCAA CCGGTAGCGGC AAC GCCGACACCGG CGCCTGAGCCGAAAC TERM 595 454175 - 454162 - g 84 -5.9 -5.06414 | GCTGCTGAAGAAAAA CCCGC GCCA ACGGG TAAAGCGTACGTTGT CKO_00472 453733 - 454416 + | hypothetical protein TERM 596 454436 - 454448 + F 70 -9.1 -3.30124 | overlap 454417 454435 CCGCTGCCTGATGGC GACGC TGC GCGTC TTATCAGGCCTACGA TERM 597 454603 - 454628 + F 100 -9.8 -5.27335 | AGGCAAAAAGTTTGA TGGCGTTGAA TATTTT TTCAGCGCCA TTTTTATTTACGCGC CKO_00473 454731 - 455219 + | colicin V production protein CKO_00474 455255 - 456772 + | amidophosphoribosyltransferase TERM 598 456789 - 456807 + F 73 -9.5 -3.33696 | CTCTCCTCCCGGCAA GGGTGCG CAATC CGCGCCC TTGCTTGCAACGCCC CKO_00475 456870 - 457439 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 599 457490 - 457472 - T 95 -13.2 -3.85698 | opp_overlap 457472 GCGTTTTTGCACAAA TTGCCCTG TTT CAGGGCAA TTTTGTAACCGCGAT TERM 600 457472 - 457490 + T 95 -13.2 -4.37092 | opp_overlap 457472 GCGTTTTTGCACAAA TTGCCCTG TTT CAGGGCAA TTTTGTAACCGCGAT CKO_00476 457698 - 457528 - | hypothetical protein CKO_00477 457728 - 458510 + | hypothetical protein TERM 601 458575 - 458591 + F 74 -8.7 -3.95073 | overlap 458576 GCGTGATGAGAGATT TGCACCA TCA TGGTGCG TTTGTCGCTGTCAAA TERM 602 458576 - 458590 + F 70 -10 -2.96722 | overlap 458575 CGTGATGAGAGATTT GCACCA TCA TGGTGC GTTTGTCGCTGTCAA CKO_00478 458758 - 459540 + | hypothetical protein CKO_00479 459726 - 460412 + | hypothetical protein TERM 603 461101 - 461086 - g 74 -6.8 -4.24002 | CCGTAAAGCGGAAAA GCGCTG GCTC CAGCAC GTGAAACCTTCTTCA CKO_00480 460409 - 461125 + | hypothetical protein CKO_00481 461133 - 461906 + | histidine/lysine/arginine/ornithine transporter subunit TERM 604 461987 - 462003 + T 70 -9.4 -3.30635 | opp_overlap 461983 461987, overlap 461996 AGGCCGGATAAGGCA TCGCCG CCATC CGGCGA TTATCGCCCCATTTC CKO_00482 462543 - 462004 - | hypothetical protein TERM 605 462567 - 462521 - G 100 -13.8 -4.3898 | overlap 462523 462548 ATTATCGCCATAAAA TCGCCATTCCAGAAGTCAGGCA TAC TACCTTACCACTGGAATGGCTA CAGTGACCAGGTGAA TERM 606 462565 - 462523 - G 89 -16.4 -2.53422 | overlap 462521 462548 TATCGCCATAAAATC GCCATTCCAGAAGTCAGGCA TAC TACCTTACCACTGGAATGGC TACAGTGACCAGGTG CKO_00483 463480 - 462587 - | hypothetical protein TERM 607 463397 - 463441 + g 81 -14.3 -2.62263 | ACTCCGTGTGACGAC CGTCACCTGATGCCCCAGC GCCAGCA GACGGGGAATCAGGTGACG TCCTATCAGGCCAGT CKO_00484 463862 - 463500 - | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase TERM 608 463713 - 463730 + g 71 -4.7 -4.57073 | overlap 463716 CAGCGCGTCGTTGAT GTCCTCG CTTA CGCGGGC TTTTTCCGCCGGATA TERM 609 464366 - 464353 - g 91 -9.5 -4.60487 | opp_overlap 464365 CACGATCTGCAAAAA CGCGC CCGC GCGCG CCAGATTCAGGCGTG CKO_00485 463984 - 464703 + | hypothetical protein CKO_00486 464759 - 465310 + | phosphodiesterase CKO_00487 465366 - 465920 + | hypothetical protein TERM 610 465980 - 465951 - T 87 -11.5 -3.91897 | gap 1 TCCCGCAGGCATAAA CTGGAGGCGATCTG TTT CCGATCGC-TCCAG TTGCCATCCTTCAGA CKO_00488 466945 - 465926 - | hypothetical protein CKO_00489 467229 - 467639 + | hypothetical protein TERM 611 467676 - 467694 + F 71 -10.2 -2.69964 | opp_overlap 467671 467674 ACCTGACACATTACG CGCCTGCG TGA TGCGGGCG TACTCTACTTAAAAG CKO_00490 467716 - 467994 + | hypothetical protein TERM 612 468515 - 468529 + G 71 -11.4 -2.88249 | ATGGCCTTTTTCCCG GCGCTG GCG CAGCGC TATATGAAGCGTATC CKO_00491 468017 - 469408 + | ascorbate-specific PTS system enzyme IIC TERM 613 469812 - 469822 + G 71 -8.2 -3.89814 | overlap 469810 CAAACTTGCCGGGCG CCCG AAT CGGG TATTTTGTATCGTCG CKO_00492 469405 - 470235 + | hypothetical protein TERM 614 470497 - 470508 + GF 71 -5.8 -4.28018 | overlap 470505 CTTCACCGCCTTTGC CAGC CGTC GCTG TTTTGATCAGCTGTT CKO_00493 470228 - 471181 + | hypothetical protein TERM 615 471244 - 471278 + GT 76 -4.9 -4.75372 | gap 1, opp_overlap 471233 471254 471257, overlap 471245 ATAACCTGACTCGTA GGCCGGAT-AAGACGC GCCA GCGTCGCCATCCGGCA TTTTTGATCAATGGT CKO_00494 471153 - 471317 + | hypothetical protein CKO_00495 472764 - 471286 - | hypothetical protein TERM 616 472758 - 472770 + g 80 -4.7 -5.00616 | overlap 472759 TAATCACCAGCGTAT CGGGC ATC GCCCA TTTTTTGGCAGGCCG CKO_00496 473020 - 472871 - | hypothetical protein TERM 617 472963 - 472939 - G 100 -10.9 -5.24129 | opp_overlap 472937 GGCGGGCATAAAAAA TCTGGAAATAA TCG CTATTTCCAGA CCTTAGATATGAAGT TERM 618 473020 - 472977 - G 80 -11.9 -3.32498 | gap 2, overlap 472978 GACCTTAGATATGAA GTGCTGGCCGGATAAGGACGC CTTA GCGTCGCTATCCGG-CA-CAC AAAGCAGATTACTGC TERM 619 473021 - 472978 - G 72 -12.4 -2.59177 | overlap 472977 ACCTTAGATATGAAG TGCTGGCCGGATAAGGACGC CTTA GCGTCGCTATCCGGCACACA AAGCAGATTACTGCT CKO_00497 475158 - 473029 - | phosphate acetyltransferase TERM 620 475246 - 475219 - R 95 -12.8 -4.37092 | gap 1, overlap 475221 475222 475224 AGGCGGGTTACAAAA CAGCACCGCCAGC TAG GCTGGCGGTG-TA AAATCAGGCAGTCAG TERM 621 475245 - 475221 - R 100 -15.7 -3.79419 | overlap 475219 475222 475224 GCGGGTTACAAAACA GCACCGCCAGC TAG GCTGGCGGTGT AAAATCAGGCAGTCA TERM 622 475244 - 475222 - R 100 -19.2 -2.8733 | overlap 475221 475219 475224 CGGGTTACAAAACAG CACCGCCAGC TAG GCTGGCGGTG TAAAATCAGGCAGTC TERM 623 475242 - 475224 - R 93 -16 -2.98387 | overlap 475222 475221 475219 GGTTACAAAACAGCA CCGCCAGC TAG GCTGGCGG TGTAAAATCAGGCAG CKO_00498 476452 - 475250 - | acetate kinase CKO_00499 476513 - 476671 + | hypothetical protein TERM 624 476887 - 476877 - g 77 -8.2 -4.18018 | opp_overlap 476885 GTGGCCGATGGAAAA GCGC CTT GCGC CGGTCTTTGTTGAGA CKO_00500 476791 - 477246 + | hypothetical protein TERM 625 477291 - 477272 - f 93 -10.8 -4.55689 | opp_overlap 477272 ATTACGCATATAAAA GAAGGCAT ACCA ATGCCTTC TTTTTTTGACCGCAG TERM 626 477272 - 477291 + F 100 -10.8 -5.40072 | opp_overlap 477272 ATTACGCATATAAAA GAAGGCAT ACCA ATGCCTTC TTTTTTTGACCGCAG CKO_00501 477330 - 477824 + | hypothetical protein CKO_00502 477817 - 478494 + | putative phosphatase TERM 627 478505 - 478522 + F 85 -6.2 -5.24129 | CCTGAACATGATTTA GCCCCG CATTGT TGGGGC TTTTTTATGGCAGAA TERM 628 479976 - 480004 + G 80 -8.9 -4.14511 | overlap 479977 GCGATTCACTGGCCG AGCATTATCCTGA TTG TCGGGATGATGCC TTTTGCGCTGGCGTT TERM 629 479977 - 480003 + G 76 -12.4 -3.08224 | overlap 479976 CGATTCACTGGCCGA GCATTATCCTGA TTG TCGGGATGATGC CTTTTGCGCTGGCGT CKO_00503 478572 - 480404 + | hypothetical protein TERM 630 480427 - 480469 + T 79 -10.8 -3.65351 | gap 1, opp_overlap 480466 CCGGATGGCGCTATT CG-CTTATCCGGCCTAC AAATGTAGCA GTAGGTCGGATAAGACG TTTACGTCGCCATCC CKO_00504 481095 - 480496 - | hypothetical protein TERM 631 480581 - 480599 + g 74 -2.2 -5.0538 | overlap 480584 TAGTCCATCTCTTCG CTGCGGCG CGA CGCCAGGG TTTTTTCCAGTCGCG TERM 632 480790 - 480800 + g 70 -5.4 -4.43501 | CATATCCACCAGTTT TTGC TGA GCAA TTTTCTCAATCGCTT CKO_00505 482417 - 481200 - | aminotransferase AlaT CKO_00506 482537 - 482668 + | hypothetical protein TERM 633 483435 - 483455 + G 79 -12.5 -2.96395 | opp_overlap 483432, overlap 483436 CCGATCTGAACACGT TCGCCGCTG CGG CGGCGGCGG TGTGTCGTACTCAGT CKO_00507 483353 - 484291 + | hypothetical protein TERM 634 484366 - 484333 - f 73 -2.4 -5.09426 | gap 1, opp_overlap 484333 484336, overlap 484335 TGTAAGTGTAAAAAA GGGCCGCTG-ATGCT GAAAA AACATCCAGCGGTTC TTTTTTTATACAATT TERM 635 484333 - 484366 + F 89 -4.6 -5.63504 | gap 1, opp_overlap 484333 484335, overlap 484336 TGTAAGTGTAAAAAA GGGCCGCT-GATGCT GAAAA AACATCCAGCGGTTC TTTTTTTATACAATT TERM 636 484336 - 484363 + F 76 -4.9 -4.89054 | gap 1, opp_overlap 484335 484333, overlap 484333 AAGTGTAAAAAAGGG CCGCT-GATGCT GAAAA AACATCCAGCGG TTCTTTTTTTATACA TERM 637 485218 - 485232 + G 89 -2.8 -5.71295 | GCGGTTGGGTAGGCT TTGTGG AAG CTGCAA TTTTTATTTTTGTGT CKO_00508 484920 - 485363 + | NADH dehydrogenase subunit A TERM 638 485465 - 485442 - g 95 -11 -4.57073 | TACCCCCTGCAAAAA CAGGAGATCG TAAC CGACCCCCTG GAGCAAGAAATCAAC TERM 639 485512 - 485485 - g 74 -3.3 -4.88407 | AAGAAATCAACAAAA GCGTGTACATG GGCAAG CTCGAACACGC GCTGCATGACATGGT CKO_00509 485379 - 486053 + | NADH dehydrogenase subunit B TERM 640 486273 - 486283 + G 74 -8.2 -3.96216 | TCAGGCGACCCGCAC CGGG GTA CCCG TTGTTTGGGTCAAGC TERM 641 486398 - 486422 + G 100 -9.1 -4.89729 | overlap 486399 486419 AGCGTCTGCGCACGC ACCGCGACGGG TTA CCCGCTGCGGA TTTTTCCGTTTTCTA TERM 642 486399 - 486421 + G 85 -12.6 -3.5221 | overlap 486398 486419 GCGTCTGCGCACGCA CCGCGACGGG TTA CCCGCTGCGG ATTTTTCCGTTTTCT TERM 643 486419 - 486430 + G 73 -5.8 -4.41548 | overlap 486399 486398 ACGGGTTACCCGCTG CGGA TTTT TCCG TTTTCTACCATCTGA CKO_00510 486139 - 487941 + | bifunctional NADH:ubiquinone oxidoreductase subunit C/D CKO_00511 487944 - 488444 + | NADH dehydrogenase subunit E TERM 644 489319 - 489305 - g 82 -11.4 -3.84451 | GGCCTGAAATTCAAA GCCTGG CAG CCAGGC GGCGCGGGAACCGAC CKO_00512 488441 - 489778 + | NADH dehydrogenase I subunit F TERM 645 490038 - 490024 - g 70 -5.6 -4.46404 | GAAGCAATATCAAAA CGCGGA AGA TACGCG TGGTCGCCTGGTGAT CKO_00513 489851 - 492586 + | NADH dehydrogenase subunit G CKO_00514 492583 - 493560 + | NADH dehydrogenase subunit H CKO_00515 493575 - 494117 + | NADH dehydrogenase subunit I CKO_00516 494129 - 494683 + | NADH dehydrogenase subunit J CKO_00517 494680 - 494982 + | NADH dehydrogenase subunit K CKO_00518 494979 - 496820 + | NADH dehydrogenase subunit L CKO_00519 497004 - 498533 + | NADH dehydrogenase subunit M CKO_00520 498540 - 499997 + | NADH dehydrogenase subunit N TERM 646 500040 - 500011 - T 83 -10.1 -4.15328 | opp_overlap 500019, overlap 500012 500019 AAGCGAAAGCAGAAA CGAAAAAACCCGC CGTG GCGGGTTTTTTTA TGCCCTGAACGTCAG TERM 647 500039 - 500012 - T 75 -11.4 -3.08112 | opp_overlap 500019, overlap 500011 500019 AGCGAAAGCAGAAAC GAAAAAACCCGC CGTG GCGGGTTTTTTT ATGCCCTGAACGTCA TERM 648 500032 - 500019 - T 100 -9.5 -5.42514 | opp_overlap 500019, overlap 500012 500011 GCAGAAACGAAAAAA CCCGC CGTG GCGGG TTTTTTTATGCCCTG TERM 649 500019 - 500032 + T 100 -9.5 -5.626 | opp_overlap 500019 500012 500011 GCAGAAACGAAAAAA CCCGC CGTG GCGGG TTTTTTTATGCCCTG CKO_00521 501064 - 500060 - | hypothetical protein CKO_00522 502046 - 501129 - | ribonuclease Z TERM 650 501305 - 501320 + g 85 -4.6 -5.13741 | overlap 501300 GCCTGGTGGAGCTGT GCCCAC GGCT GTTGGC TTTTTCTTCCATTGA CKO_00523 502112 - 502573 + | hypothetical protein TERM 651 502875 - 502864 - g 78 -5.8 -4.72986 | TACGTGCATGAAAAA CCCT GGCA AGGG ATTGGCGCAGGTGCG CKO_00524 502627 - 502932 + | hypothetical protein TERM 652 502946 - 502973 + F 71 -3.3 -4.8667 | opp_overlap 502962 502963, overlap 502963 AATGTAACCGGGATC GCATTTCCTCC CTAAAC GGGGGTACTGC TTTTTCTCCGCTGTA TERM 653 503705 - 503726 + G 74 -7.3 -4.21974 | gap 1, overlap 503718 CTACCATTTTTTTAT GGCGTTCTCC GCC GGA-AGCGCC TTTCTTGGCTCGTCG TERM 654 503889 - 503870 - g 91 -7.8 -4.94902 | GAAGGATGATAAAAA CCAGCGTG AAAA CATGCTGG TGGTAGAAGATATTT CKO_00525 503100 - 504326 + | hypothetical protein TERM 655 505662 - 505706 + G 78 -12.2 -3.25986 | opp_overlap 505690 ACGCGCTGTCGCAGC TACCGGCGGGCTACCCGG-TGT ACA GCAACCGGGGAGCCAGC-GGTA TTGATGGTCTGATCT CKO_00526 504455 - 506125 + | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 656 506151 - 506173 + G 100 -13.4 -4.28548 | overlap 506152 GCAGGCGAACGGTGG TCAGCCGGGG TCT CCCTGGCTGG TTTTCCTGCATGGAT TERM 657 506152 - 506172 + G 95 -14.7 -3.16647 | overlap 506151 CAGGCGAACGGTGGT CAGCCGGGG TCT CCCTGGCTG GTTTTCCTGCATGGA TERM 658 506481 - 506523 + G 81 -11.8 -3.57144 | overlap 506509 GCAACGCGAGGCCGA GCGTGACGCGCGCCGACGGT CTG ACGGTCGTTGGGCGGCGCGC TTTCGCCGTGAACCG CKO_00527 506122 - 506880 + | acyl-CoA thioester hydrolase YfbB CKO_00528 506895 - 507752 + | naphthoate synthase CKO_00529 507752 - 508714 + | O-succinylbenzoate synthase TERM 659 510089 - 510066 - g 73 -5.2 -4.58663 | ATCAGCGCTGAAAAA CGGCGGGA TCAAAGTT TCGCGCCG GGCATTGCAGGAGTG CKO_00530 508711 - 510126 + | O-succinylbenzoic acid--CoA ligase TERM 660 510157 - 510136 - T 100 -15.9 -3.4052 | opp_overlap 510153 CCGTAATGTAAGCAA CACGGGAGC CGCA GCTCCCGTG GAAACGGTTATTTCG CKO_00531 511613 - 510165 - | hypothetical protein TERM 661 512393 - 512368 - g 75 -11.1 -3.34398 | overlap 512366 CCTGGCGGGTAAAGA CGGCAACCGTG ACAA CGCGATTGCCG ATGGCCCGTACGTCG CKO_00532 511886 - 512428 + | hypothetical protein TERM 662 512434 - 512455 + F 77 -9.3 -3.90358 | overlap 512435 CAGCTTCTGATTTTC GGGCGCGGC ATCC GTCGCGCCG TTTCCTGTATGCTAT TERM 663 512435 - 512454 + F 79 -12.8 -2.93492 | overlap 512434 AGCTTCTGATTTTCG GGCGCGGC ATCC GTCGCGCC GTTTCCTGTATGCTA CKO_00533 512565 - 513761 + | competence damage-inducible protein A CKO_00534 515015 - 513825 - | sn-glycerol-3-phosphate dehydrogenase subunit C CKO_00535 516271 - 515012 - | anaerobic glycerol-3-phosphate dehydrogenase subunit B TERM 664 515875 - 515835 - G 73 -9.1 -3.7795 | gap 3 TGAAAGTCCAGTAAA CCGCTGATGCCG-ACGACGC AAAT GCGTTGTGCGGC--CAGCGG CCAGACGGGCACTTC CKO_00536 517889 - 516261 - | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 665 516962 - 516976 + g 88 -11.4 -4.11216 | opp_overlap 516910 516971 GCACGCCCGAGTAGG CGCGCA AAA TGCGCG TTTTCGCCATCACCG TERM 666 518213 - 518197 - g 71 -4.4 -4.66537 | gap 1 CTGCGCAACATAAAA CGC-GCT TGCC AGCAGCG GAGATTGATCCGACA TERM 667 518427 - 518442 + G 71 -6 -4.25104 | opp_overlap 518407 GGGTCGGTCTCCGAC CGCTCG AATC CGCGCG TTTTCCTGCCCGCAG TERM 668 519316 - 519300 - g 77 -3.5 -5.00616 | opp_overlap 519314, overlap 519302 CTGGCGCCGAAAAAA GCGGCAG GTA CGGCGGC GGGCTTCACCGGCCT CKO_00537 518163 - 519521 + | sn-glycerol-3-phosphate transporter TERM 669 519745 - 519726 - g 87 -13.6 -3.21099 | opp_overlap 519715 TTTGGTGATGACGAA GGACGACC ATCT GGTCGTCC TGCATGACCACTACC TERM 670 520271 - 520258 - g 72 -3.7 -4.78764 | opp_overlap 520258 GAAACTCAGCAAAAA CAGCC GGAC GGCAG TTGGGTTAACTATAA TERM 671 520343 - 520325 - g 75 -6.6 -4.49556 | overlap 520326 GCGCGATGAAAGAAA TCGCCAGC TAT GCTGACGG GATCGGCCCGGACTA CKO_00538 519526 - 520596 + | glycerophosphodiester phosphodiesterase TERM 672 520627 - 520600 - T 100 -9.9 -4.8269 | gap 2 GATAAGCACTAAAAA GCCGGGT--GGCG GCTT CGCCTTACCCGGC CTGTGAACTGCGGAC TERM 673 520710 - 520735 + T 100 -16.3 -3.6715 | opp_overlap 520725 520728, overlap 520728 GATCTCAATATCGCC TTTTGCCCTGC AACA GCAGGGCAAAA TTTCCCCTTCGCTGA CKO_00539 520940 - 520686 - | 2Fe-2S ferredoxin YfaE CKO_00540 522070 - 520940 - | ribonucleotide-diphosphate reductase subunit beta TERM 674 522002 - 522038 + g 74 -3 -4.84527 | gap 1, opp_overlap 522014, overlap 522020 GCGTGCCACGTTGAC CGGCTGGC-CAAAGAAC ATCG GCTCTTTGAGTTGGTCG TTTTTCGTCTGTGAA CKO_00541 524458 - 522173 - | ribonucleotide-diphosphate reductase subunit alpha CKO_00542 525627 - 524899 - | 3-demethylubiquinone-9 3-methyltransferase TERM 675 526659 - 526639 - g 74 -6.8 -4.32857 | opp_overlap 526658, overlap 526652 CTGGTGAAAGACAAA CGCGTTGA AGGCA TCAGCGCG CTGCGCGACGAGTCT CKO_00543 525787 - 528423 + | DNA gyrase subunit A TERM 676 528450 - 528467 + TF 100 -8.4 -5.75945 | opp_overlap 528450 AAATCGTGTGTGAAA GGAGGC CATTGC GCCTCC TTTTTTTTGCCGGAT CKO_00545 529716 - 528532 - | hypothetical protein TERM 677 529419 - 529436 + gF 77 -8.3 -4.07568 | CGGCCTGAATCGCCT GCGCGGC AAGC GCCACGC TTTTGAGGCCGGAGC CKO_00546 531069 - 529747 - | hypothetical protein CKO_00544 529637 - 529810 + | hypothetical protein TERM 678 530494 - 530473 - GT 70 -6.5 -4.1552 | CATTCGGGTAATAAA CGGCATCAC CACG ATGAGGCCG AGCGTGATGAAAATA CKO_00547 531716 - 531066 - | hypothetical protein CKO_00548 532396 - 531716 - | acetyl-CoA:acetoacetyl-CoA transferase subunit alpha TERM 679 532521 - 532567 + r 100 -24.8 -3.46602 | opp_overlap 532535 GATGAGAGGGCGTGA GGTGCTATGCAGAATTTTGCGC ACT GTGCAAAATTCTGCATAGCAAC TTCTGGTATCAGAGG CKO_00549 533961 - 532576 - | acetoacetate metabolism regulatory protein AtoC TERM 680 532835 - 532821 - G 73 -5.6 -4.56597 | opp_overlap 532822, overlap 532822 GGTCTTCGGCAAAAA TCACCG CCC CGGTGT TCATTACTACCGCGC TERM 681 533678 - 533665 - G 74 -8.1 -4.05848 | opp_overlap 533664 533666 533675 AATCACATAATCAAA TGCGC CGCT GCGCA GTGCTTCTACGGCGG CKO_00550 535739 - 533958 - | sensory histidine kinase AtoS TERM 682 535010 - 535045 + g 81 -13.2 -2.90992 | overlap 535007 TCAGCGTCTTGGTTT CCCGCAGTGTCTGCGC CAGA GCGTTGACGCTGCGGC TGATTTGCCCCAGTT TERM 683 535368 - 535350 - G 74 -7.4 -4.07568 | CTGCCGGCCTGAAAA TACCACCG GGG CGTTGGTA CTCATGACCTCCCGG CKO_00551 535832 - 536092 + | hypothetical protein TERM 684 536540 - 536569 + GT 83 -6.4 -4.85599 | gap 1, overlap 536557 TAACCTTTTCTGGAT TAGCCAGGGGCCG CGCCC CGGCATC-GGCTA TTTTTATGCCCTGAC CKO_00552 535953 - 538799 + | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 685 538833 - 538804 - T 85 -6.4 -5.24129 | gap 2, opp_overlap 538812 CGCGGGCATAAAAAA GGCCGGA--TGGCG GTTT CGCCTTCTCCGGCC TACTGCAATCATCAA CKO_00553 539543 - 538893 - | transcriptional regulator RcsB CKO_00554 542229 - 539560 - | phosphotransfer intermediate protein in two-component regulatory system with RcsBC TERM 686 542183 - 542168 - G 71 -4.6 -4.58786 | AGTAATAAGAAGAAA CGGGTA ATGC TTCCCG GCAGAAGGGAGAATC TERM 687 542569 - 542551 - RH 100 -11 -6.3578 | AGGGTAAAAAAAAAA CCGAATGC GAG GCATCCGG TTGAAATAGGGGTAA CKO_00557 542848 - 542750 - | hypothetical protein CKO_00556 542718 - 542819 + | hypothetical protein TERM 688 543501 - 543491 - g 71 -4.6 -4.63527 | overlap 543493 GTATCAGGGTAAAAA CGGC AGC GCCA GCGGTGAAAACGACG CKO_00558 542970 - 544097 + | outer membrane porin protein C CKO_00560 544315 - 544085 - | hypothetical protein TERM 689 544132 - 544119 - Gf 80 -9.5 -3.9377 | opp_overlap 544119 ACAATGTCAACTAAA GGGCC TGCG GGCCC TTTTTTAATGCGTTT TERM 690 544119 - 544132 + gF 100 -9.5 -5.19261 | opp_overlap 544119 ACAATGTCAACTAAA GGGCC TGCG GGCCC TTTTTTAATGCGTTT TERM 691 544227 - 544255 + Gg 74 -6.8 -4.26475 | gap 2 TATGGAAATGACCTT TTGTCG-GG-CAGC GCT GCTGGCCGCGACGA TCTTTTTTGTGGGGT CKO_00559 544213 - 545268 + | thiamine biosynthesis lipoprotein ApbE TERM 692 545383 - 545425 + G 91 -7.7 -4.87389 | gap 1, overlap 545411 545414 AAACGACGATGCGCG CTGGCAGTCGGTG-CTGGAT CGCG ATCCTGACGCCGATGGTCAG TTTGTTTTTGCGGTA CKO_00561 545333 - 546412 + | hypothetical protein TERM 693 546835 - 546847 + G 70 -5.5 -4.43877 | overlap 546825 CCGGATCTGCGCGCG CCGAT TGT GTCGG TTTCTTTGGGCCTTC TERM 694 546855 - 546868 + G 72 -3.7 -4.81249 | overlap 546856 TGTGTCGGTTTCTTT GGGCC TTCC GGCCA TTTTTCAGTTTGGCG CKO_00562 546409 - 547062 + | hypothetical protein TERM 695 548515 - 548505 - g 72 -2.4 -4.89393 | GAAAGGGCAGAAAAA GCGC GTG GCGT TGCTGCTGGCGCTGG CKO_00563 547138 - 548781 + | multidrug transporter membrane component/ATP-binding component TERM 696 548789 - 548817 + F 86 -14.5 -2.71731 | opp_overlap 548799 548800, overlap 548800 CTGCCTGATCCTGTA GGCCGGATAAGGC GTA GCCGCATCCGGCC TGGTTGCCCGATGGC TERM 697 549000 - 548981 - g 70 -2.8 -4.81083 | gap 1, opp_overlap 548993 548994, overlap 548983 548984 CGCAATGACCAAAAA CAGCGC-CA GAC TGCGCGATG AAGAGCGTGCGCGTC TERM 698 549561 - 549544 - g 71 -4.8 -4.56597 | GCCGTCTGGGAAAAA TGCCGG AAAACA CCGACA AACTCTTTGTAACGA TERM 699 550322 - 550292 - g 74 -9.7 -3.62572 | gap 1, opp_overlap 550288 GATGACGATGGTAAA GCTCGGGCGCGACC CGGC GGTCG-GCTCAAGC GTGATGATTACCGCC TERM 700 550333 - 550354 + G 77 -4.3 -4.96845 | overlap 550344 CAAGCGTGATGATTA CCGCCATTA CCGA TACCGGCGG TTTCTTTATTTTTCT TERM 701 550344 - 550358 + G 77 -4.2 -4.96501 | overlap 550333 ATTACCGCCATTACC GATACC GGC GGTTTC TTTATTTTTCTGGGG CKO_00564 548961 - 550397 + | hypothetical protein TERM 702 550943 - 550926 - g 100 -9.1 -5.04385 | overlap 550915 TACACGCCGAAAAAA GCCGACG GTTC CGTCAGC ATCGAAAAGGCAGTC TERM 703 552254 - 552237 - g 70 -6.9 -4.15106 | overlap 552209 552206 GACGAAGCGCCAAAA CCGCAGC TTAA GCCGCAG GTTCAACCGCAGCCG CKO_00565 550641 - 552302 + | malate:quinone oxidoreductase CKO_00566 552967 - 552404 - | ecotin precursor CKO_00567 553234 - 553067 - | hypothetical protein CKO_00568 553793 - 554059 + | assembly protein for periplasmic nitrate reductase CKO_00569 554056 - 556542 + | nitrate reductase TERM 704 556683 - 556661 - g 80 -10.4 -3.81951 | overlap 556656 GGTTACAGCAGCAAA CCGCTCGCGC AAC GGGCGTGCGG TTGCGCCCGCCGGGG TERM 705 556773 - 556799 + G 100 -15.2 -4.04206 | opp_overlap 556772 ATGTCCGTATGACAC CCTGAAGCTGGC GAC GCTAGCTTCGGG TTTGTCTGCCGGTAC CKO_00570 556600 - 557244 + | quinol dehydrogenase periplasmic component TERM 706 557294 - 557279 - g 84 -6.1 -5.08824 | opp_overlap 557289 557290 557292, overlap 557280 GCGCGAGCGAAAAAA GGCTG GTGGCG CAGCC ATCGCTGGCTGATTT CKO_00571 557231 - 558094 + | quinol dehydrogenase membrane component CKO_00572 558070 - 558540 + | diheme cytochrome c550 CKO_00576 559782 - 558640 - | hypothetical protein CKO_00573 558550 - 559152 + | cytochrome c-type protein NapC TERM 707 559435 - 559452 + Gg 71 -4.7 -4.58395 | AAAACCCGGCTTTCG GCGTTGG AGAA CCTGCGC TTTTTCCACCATGAC CKO_00574 559165 - 559785 + | cytochrome c biogenesis protein CcmA CKO_00575 559782 - 560441 + | hypothetical protein CKO_00577 560586 - 561323 + | hypothetical protein TERM 708 561362 - 561373 + GT 83 -7.2 -4.61868 | GATTTCTTTGCTATG GGCG GTTA CGCC TTTTATGTCTGGCTG CKO_00580 561969 - 561376 - | hypothetical protein CKO_00578 561320 - 561532 + | hypothetical protein CKO_00579 561529 - 562008 + | cytochrome c-type biogenesis protein CcmE TERM 709 562111 - 562127 + G 80 -12.3 -3.42996 | overlap 562124 GCGATGTGCGCATGA TGGCCTC GGC GAGGCCA TTCTCCTGGCTGCTG CKO_00581 562005 - 563948 + | hypothetical protein TERM 710 564478 - 564464 - g 91 -7.8 -4.96468 | GAAAGTGAAATAAAA CCGCTC TGG GAGCAG TACAGCAAGGAGGCC CKO_00582 563945 - 564502 + | hypothetical protein TERM 711 565055 - 565025 - g 72 -3.9 -4.68994 | gap 1, opp_overlap 565037, overlap 565035 ATCAGCAGGTAAAAA TCTGGCAACAG-GC TACG GCGCAGACGCCAGA GTTGCTGGAGCGCGC TERM 712 565296 - 565263 - g 73 -5.2 -4.62336 | opp_overlap 565278 565279, overlap 565265 ACTGGACCCCAAAAA TAGCGATGCCGCAT TAGGGT ATGCGGAAGCGCTG ACCCGTTCTTCCGAT TERM 713 565294 - 565265 - g 71 -7.8 -3.92746 | opp_overlap 565278 565279, overlap 565263 TGGACCCCAAAAATA GCGATGCCGCAT TAGGGT ATGCGGAAGCGC TGACCCGTTCTTCCG CKO_00583 564499 - 565548 + | hypothetical protein CKO_00584 566274 - 565627 - | transcriptional regulator NarP TERM 714 566451 - 566468 + r 82 -7 -4.84017 | opp_overlap 566451 GCAGGCATAAAAAAA CCAACC GTAAGA GGTTGG TTTTTCTAAGGGATT TERM 715 566468 - 566451 - R 93 -7 -5.64274 | opp_overlap 566451 GCAGGCATAAAAAAA CCAACC GTAAGA GGTTGG TTTTTCTAAGGGATT TERM 716 566607 - 566651 + r 70 -9.5 -2.98447 | opp_overlap 566600, overlap 566606 566610 CCACGAATGCAAGGG GATGTCTTGCTAACTGATTTA TAA TTAATCAGTTAGCAATGAATC GTTTCTCGTCGGTCA CKO_00586 568395 - 566635 - | hypothetical protein CKO_00587 568642 - 568415 - | hypothetical protein TERM 717 568988 - 568973 - g 74 -10.4 -3.55622 | overlap 568933 GTGAACTGGCGCAAA CGCTGC GGTT GCAGCG TCAGGGCGAGGAGGA CKO_00588 568777 - 569784 + | nucleoid-associated protein NdpA TERM 718 569892 - 569877 - g 100 -11.8 -5.67063 | opp_overlap 569877 CGCACCATAAAAAAA CCCCGC CGTG GCGGGG TTTTTCTTCAACTTG TERM 719 569877 - 569892 + G 100 -11.8 -5.10208 | opp_overlap 569877 CGCACCATAAAAAAA CCCCGC CGTG GCGGGG TTTTTCTTCAACTTG CKO_00589 569790 - 569939 + | hypothetical protein CKO_00591 570199 - 569915 - | 50S ribosomal protein L25 CKO_00590 569936 - 570214 + | hypothetical protein CKO_00592 572084 - 570324 - | hypothetical protein TERM 720 570726 - 570762 + g 88 -11.6 -4.14392 | opp_overlap 570726 570725, overlap 570730 570735 CGGGTCGACCAGAAT CG-TGTCGCACTCCCGGC AGC GCCGGGCG-GCGATATCG TTTTCCGCGTTGCAC TERM 721 570730 - 570757 + g 84 -13.4 -3.10091 | gap 1, opp_overlap 570726 570725, overlap 570726 570735 TCGACCAGAATCGTG TCGCACTCCCGGC AGC GCCGGGCG-GCGA TATCGTTTTCCGCGT TERM 722 572187 - 572203 + H 79 -10.1 -3.81258 | CAACGGCTTCATTTT TCGGGCG TTA TGCCCGA TTTCCGTATTATTAC CKO_00593 572196 - 572933 + | 16S rRNA pseudouridylate synthase A TERM 723 573073 - 573085 + GF 73 -10.5 -3.01125 | overlap 573069 ATTGATATGTATCTT CCGGC GCT GCCGG TGATTTCTGCCCAGT CKO_00594 573040 - 574173 + | bicyclomycin/multidrug efflux system TERM 724 574189 - 574206 + GT 74 -7.7 -4.18488 | opp_overlap 574188 574183 574189 TCTAATACACAACAT GGAAGCT GGAA GGCTTCC TTTGTTGACGTACAT CKO_00596 574273 - 574175 - | hypothetical protein CKO_00595 574109 - 574267 + | hypothetical protein CKO_00597 574488 - 574853 + | hypothetical protein CKO_00598 576446 - 574857 - | hypothetical protein TERM 725 576090 - 576107 + g 73 -5.5 -4.59109 | overlap 576081 TCCCCGGTGCAGGGA CAGCACT TCGT AGAGCTG TTTTTCCAGCGTATG CKO_00599 577473 - 576448 - | hypothetical protein TERM 726 576700 - 576685 - G 76 -5.4 -4.68506 | gap 1 AATGAACGGTAAAAA GGTCAGC GTG GC-GACC ATCGCGTTGGGCAGC TERM 727 577204 - 577178 - G 77 -8.6 -4.07568 | opp_overlap 577178, overlap 577157 577156 CTGGTGGCGCCAAAA CGCACGGGCGCC CAC AGCACCCATCCG TGGTTTTCAAGCTGC CKO_00600 578567 - 577473 - | hypothetical protein TERM 728 577722 - 577677 - G 89 -8.9 -4.59853 | CGAACCGGTGAAAAA CATGCTGATAAAGGTGGCCGG AAAA CCGGCGATCACCAGCAGCATG GCGTTGCGGAAAACG CKO_00601 580382 - 578568 - | hypothetical protein TERM 729 580384 - 580397 + r 76 -5.3 -4.78237 | overlap 580385 ACGCGAGCAATCATC GGAAA ATGG TTTCC TTTTCTTATCACCTG CKO_00602 582048 - 580492 - | hypothetical protein TERM 730 582196 - 582159 - R 86 -12.1 -3.50572 | opp_overlap 582159 582161 582163 582169, overlap 582169 AGGGATGCGATAGAA CGCAAAAAAAGCACCGC CGAA GCAGTGCTTTTTATGTG TCTCGTCAGGATTGC TERM 731 582159 - 582196 + r 77 -12.1 -2.79831 | opp_overlap 582159 582169, overlap 582161 582163 582169 AGGGATGCGATAGAA CGCAAAAAAAGCACCGC CGAA GCAGTGCTTTTTATGTG TCTCGTCAGGATTGC TERM 732 582161 - 582194 + r 75 -11.1 -2.94595 | opp_overlap 582159 582169, overlap 582159 582163 582169 GGATGCGATAGAACG CAAAAAAAGCACCGC CGAA GCAGTGCTTTTTATG TGTCTCGTCAGGATT TERM 733 582186 - 582169 - R 100 -9.1 -5.55698 | opp_overlap 582163 582161 582159 582169, overlap 582159 TAGAACGCAAAAAAA GCACCGC CGAA GCAGTGC TTTTTATGTGTCTCG TERM 734 582169 - 582186 + r 85 -6.9 -5.07275 | opp_overlap 582169 582159, overlap 582163 582161 582159 TAGAACGCAAAAAAA GCACCGC CGAA GCAGTGC TTTTTATGTGTCTCG CKO_00603 582806 - 582237 - | putative outer membrane lipoprotein CKO_00604 582812 - 583042 + | hypothetical protein CKO_00605 583014 - 583184 + | hypothetical protein TERM 735 583209 - 583162 - T 71 -7.9 -3.90744 | opp_overlap 583167 583169, overlap 583166 CGGGGCGGGAAATAA TCGACGATCGCCATCAG-GAGTG AGAA CGCTCTCTGATGGCGAT-GTTAA TTGATGTGATTTATT TERM 736 583205 - 583166 - T 73 -10.9 -2.71101 | opp_overlap 583167 583169, overlap 583162 GCGGGAAATAATCGA CGATCGCCATCAG-GAGTG AGAA CGCTCTCTGATGGCGAT-G TTAATTGATGTGATT TERM 737 583167 - 583205 + T 86 -13.3 -3.44186 | gap 1, opp_overlap 583166 583162, overlap 583169 CGGGAAATAATCGAC GATCGCCATCAG-GAGTG AGAA CGCTCTCTGATGGCGATG TTAATTGATGTGATT TERM 738 583169 - 583203 + T 100 -15.9 -3.28487 | gap 1, opp_overlap 583166 583162, overlap 583167 GGAAATAATCGACGA TCGCCATCAG-GAGTG AGAA CGCTCTCTGATGGCGA TGTTAATTGATGTGA CKO_00606 583939 - 583220 - | hypothetical protein CKO_00607 584954 - 583968 - | hypothetical protein TERM 739 584241 - 584225 - G 74 -4.3 -4.72986 | opp_overlap 584232, overlap 584227 584229 TATCCGCATCAAAAA TCCAGCC GCA GGCCTGA TGCCCCTGGCCGCTG CKO_00608 586540 - 585074 - | hypothetical protein TERM 740 585433 - 585475 + g 84 -13.5 -3.06183 | gap 1 GGCTGCCGTCCATCG CGATTTGCCAGGTCCGGTGC TTCA GCGCCGGAT-TGGCGAAGCG TTCAATCAGGCTGGC TERM 741 585932 - 585950 + g 71 -4.4 -4.57569 | CGCCGCGCGTTTTTC CGCCATGC CCA GAACGGCG TTTTTAACCACATGG TERM 742 586078 - 586051 - G 71 -8.2 -3.7941 | opp_overlap 586051 586049 586065, overlap 586052 GAGCCTCCACAAGAA TCCCCGGCGCCG AGTG CGGCTCCGTGGG GTGTTGCATATCGTG TERM 743 586077 - 586052 - G 75 -11.7 -2.87325 | opp_overlap 586051 586049 586065, overlap 586051 AGCCTCCACAAGAAT CCCCGGCGCCG AGTG CGGCTCCGTGG GGTGTTGCATATCGT TERM 744 586253 - 586288 + g 71 -4.6 -4.56775 | overlap 586254 CAGGCACTCCTTGAC CGCGCCGACGATAATC GCCT GATTGCCGTTCGCGCC TTTTTCCAGCACGGT TERM 745 586918 - 586885 - g 72 -2.4 -4.87807 | gap 1, opp_overlap 586913, overlap 586886 586887 TGAAGAGATTAAAAA GCGCCAGGCCATTCT GGCTG AGAAAGGGCTGAC-C TGGTCTGTTGTCGAA TERM 746 587247 - 587206 - g 80 -12.4 -3.43446 | gap 2, opp_overlap 587204, overlap 587204 CTACAGCGAAGAAGA GCAGCGC-CA-GGCGCTGGA CTAC TTCAACGCCATGAGCGCTGC GGATATCGAAAAACT TERM 747 587685 - 587673 - g 77 -7.7 -4.2361 | AAGATAACCCGAAAA CCTTC CAC GAAGG CGCGCATTTGCAAGG CKO_00609 586745 - 587935 + | mannonate dehydratase TERM 748 587956 - 587973 + T 100 -11.3 -5.5112 | opp_overlap 587956 GTTGGTCATAAAAAA GGACAGC CCTG GCTGTCC TTTTTTGTTGGTGCG TERM 749 587973 - 587956 - T 100 -11.3 -5.24129 | opp_overlap 587956 GTTGGTCATAAAAAA GGACAGC CCTG GCTGTCC TTTTTTGTTGGTGCG CKO_00610 588575 - 588003 - | elongation factor P TERM 750 588378 - 588404 + g 77 -11.6 -3.55548 | GCCACGGCGGCTCAG GGTGACGGTATC AAC GATGTCGTCGCC TTTGAAACGCTCTTC CKO_00611 588794 - 588982 + | hypothetical protein CKO_00612 590160 - 588979 - | hypothetical protein TERM 751 589531 - 589500 - G 90 -5.8 -5.24796 | gap 1, overlap 589503 TGCAGATAACAAAAA GCAGCAGCGT-ATCG CGG CGATTACGGCGCGGC GCTTCAAGGGTTCCG CKO_00613 590401 - 591660 + | bifunctional fructose-specific PTS IIA/HPr protein CKO_00614 591660 - 592598 + | 1-phosphofructokinase CKO_00615 592615 - 594306 + | fructose-specific PTS system IIBC component TERM 752 594402 - 594415 + F 77 -3.8 -5.26918 | overlap 594392 TTAGCGTCGCCATCC GGCA TTTCTC TGCC TTTTTTATCCCCTCT TERM 753 595428 - 595401 - g 74 -7 -4.25104 | gap 1 CGCTCCCCATTAAAA CCAACGTCG-TCA ATG TGACCGGCGCTGG CGACGCCATGATGGC CKO_00616 594665 - 595606 + | hypothetical protein TERM 754 595939 - 595917 - gT 80 -4.9 -5.00616 | gap 1 TGCCGCTGGAAAAAA TGG-TGCAAC GACG GTCGCATCCA CCATGATTATTGCCG TERM 755 596421 - 596399 - gT 83 -8.4 -4.41348 | TCGTGGGGAAAGAAA GCACGCCA TTCTTGT TGGCGCGC GTGGCGGAACTGACC CKO_00618 596614 - 596474 - | hypothetical protein CKO_00617 595594 - 596529 + | hypothetical protein TERM 756 596628 - 596611 - Gf 71 -5.7 -4.30014 | GGCATGAAGGGAAAA TCATTAT GGAT ATAATGA GAAGTGTTGTGGGTA TERM 757 597405 - 597388 - g 70 -6.9 -4.08216 | opp_overlap 597354 TGACCGGGCTGAAAA TCGCCGC TGGT GTGGCGA CGGTGGTGATGGCGT CKO_00619 596616 - 597866 + | hypothetical protein CKO_00621 597981 - 597850 - | hypothetical protein CKO_00622 598037 - 597912 - | hypothetical protein CKO_00623 598072 - 597953 - | hypothetical protein CKO_00620 597889 - 598032 + | hypothetical protein CKO_00624 599169 - 598072 - | hypothetical protein TERM 758 598964 - 598937 - G 71 -10.7 -3.28712 | opp_overlap 598935 598937 GCCGCCTGCGGATAA TGGATATCCGC CACGCC GCGAATATCCA TATTGATCGCCCCGA CKO_00625 600026 - 599169 - | endonuclease IV CKO_00626 601191 - 600142 - | hypothetical protein CKO_00627 601311 - 602174 + | putative DNA-binding transcriptional regulator TERM 759 602277 - 602222 - g 71 -8.5 -3.86015 | opp_overlap 602258, overlap 602227 TATCCGGCCTACAAA CTCAACGCTTTATCCGGCCTACA-AAT GTCG ATCCTGTAGGCCTGAT-AAGCGTAGCG CCATCAGGCGAATGT TERM 760 602272 - 602227 - g 70 -10 -3.32997 | opp_overlap 602258, overlap 602222 GGCCTACAAACTCAA CGCTTTATCCGGCCTACA-AAT GTCG ATCCTGTAGGCCTGAT-AAGCG TAGCGCCATCAGGCG CKO_00628 602182 - 602343 + | hypothetical protein TERM 761 602567 - 602589 + G 77 -4.7 -4.85918 | GTGCAACCATTTCTG CGGCGGGTC CAGGC GGCGCGCTG TTTTCTTATATCCTG TERM 762 603018 - 603030 + G 74 -10.5 -3.55203 | opp_overlap 603009, overlap 603006 GAGCAACTGGACGAC CGGCG ATG CGCCG TTTGCCGGGGGTTTT CKO_00629 602434 - 603903 + | lysine transporter TERM 763 603923 - 603968 + T 78 -12.7 -2.71924 | gap 1, opp_overlap 603966, overlap 603924 GTGTCTGATGGTGCT GCGCTTATCAGGCCTACAGGAG CGA CATTTGTAGGCCGGATAAG-GC GTTTACGCCGCCATC TERM 764 603924 - 603969 + T 88 -12.7 -3.53444 | gap 1, opp_overlap 603966, overlap 603923 TGTCTGATGGTGCTG CG-CTTATCAGGCCTACAGGAG CGA CATTTGTAGGCCGGATAAGGCG TTTACGCCGCCATCC TERM 765 604027 - 604003 - T 100 -13.6 -5.80951 | opp_overlap 604003 AGGTAAAATAAAAAA GCCCCGACAT TCATC ATGCCGGGGC TTTTTGTTGTACTGA TERM 766 604003 - 604027 + T 100 -11.4 -5.22006 | opp_overlap 604003 AGGTAAAATAAAAAA GCCCCGACAT TCATC ATGCCGGGGC TTTTTGTTGTACTGA CKO_00630 606081 - 604045 - | putative outer membrane receptor TERM 767 605221 - 605237 + g 77 -7.9 -4.33248 | GCTGTTTGGCTTACA GCTACCG TTG CGGCAGC TTTCTTCTGCCATTG TERM 768 605546 - 605556 + g 90 -5.4 -5.1861 | overlap 605534 CCGGTCCAGCCTTTT GTGT TGG ACAC TTTTTTGGTGATCAC TERM 769 606161 - 606195 + r 100 -11.8 -4.85782 | opp_overlap 606157 606165, overlap 606165 AAGAATGAATATTTG TAAACACAAATGAT AATTGAA ATCATTTGTGTTTA TTTATTTTTCACGGA TERM 770 606165 - 606191 + r 91 -8.2 -4.94811 | opp_overlap 606157 606165, overlap 606161 ATGAATATTTGTAAA CACAAATGAT AATTGAA ATCATTTGTG TTTATTTATTTTTCA TERM 771 606309 - 606292 - R 83 -9.1 -4.37013 | opp_overlap 606292 606291 AATGAAGGATGAAAA GGAGGGC AGAT ACCCTCC GTTGTTACGTTATGG CKO_00631 607664 - 606342 - | hypothetical protein TERM 772 607637 - 607622 - G 71 -10.4 -3.28712 | TTTTCGCGTTCATAA CAGGCC GATC GGCCTG ACTGAAAATAAATGC CKO_00632 608587 - 607697 - | hypothetical protein TERM 773 608377 - 608366 - G 75 -5.8 -4.55485 | GACAAAAAAATCAAA CTGC AATT GCAG TGATGCAGCGCGTAA CKO_00634 608883 - 608665 - | hypothetical protein TERM 774 608920 - 608903 - gH 77 -8.4 -4.18197 | opp_overlap 608903 ATTTCTCAGCTAAAA CGGCAG GATACG CTGCCG TTACTCAGGAATATT TERM 775 609723 - 609738 + GH 100 -6 -5.7946 | TTTGTCCGCTGGACG CGGGCG CCAT CACCCG TTTTTTTCTTACGGC CKO_00633 608867 - 610168 + | hypothetical protein CKO_00635 610188 - 610550 + | hypothetical protein CKO_00636 611387 - 610551 - | hypothetical protein CKO_00637 611473 - 611315 - | hypothetical protein TERM 776 611698 - 611677 - H 78 -6.5 -4.66953 | CCAACAGCCTAAAAA CTTTGCCCC ACGC AGGGCAGAG GCGCCACACCTGCAG CKO_00638 611725 - 612393 + | GTP cyclohydrolase I TERM 777 612478 - 612502 + G 71 -10.8 -3.20723 | gap 1, opp_overlap 612478 612475 612497, overlap 612497 TGCTTCTTAATATCA G-CGCCTTTGG CTTG CCAAAGGCGGC TTACCTTAATCCCGC TERM 778 613179 - 613195 + G 75 -6.5 -4.46212 | TGGCGGCTGGACTGG GCGTATC GCT GGTGCGC TTTTCTGCTACAGGC CKO_00639 612408 - 613565 + | hypothetical protein CKO_00640 613718 - 614758 + | DNA-binding transcriptional regulator GalS TERM 779 615800 - 615789 - g 72 -3.6 -4.78839 | AAGCGCACAATAAAA CCAG CGTT CCGG TATTCGGCGTGGATG CKO_00641 615038 - 616036 + | hypothetical protein TERM 780 616056 - 616076 + F 100 -15.5 -4.1552 | TATATCGTTTTCTTT GGGCGCAAT AAC ATTGCGCCC TTTATTAACGCACTC TERM 781 617626 - 617589 - g 95 -8.5 -4.96848 | opp_overlap 617593 617595 TTGTTGACACAAAAA CAACAACGCAAAACGAA ATTC TGCGTCTTGCGTCTTTG CACCTTTAAGATCAG CKO_00642 616160 - 617635 + | galactose/methyl galaxtoside transporter ATP-binding protein CKO_00643 617651 - 618661 + | beta-methylgalactoside transporter inner membrane component TERM 782 618703 - 618678 - T 100 -13.3 -4.72986 | opp_overlap 618678 TACCGGCATGAAAAA GCCCGAAGCAG GCAA CTGTTTCGGGC TTTTTTGTTTCTGCG TERM 783 618678 - 618703 + T 100 -15.5 -5.72622 | opp_overlap 618678 TACCGGCATGAAAAA GCCCGAAGCAG GCAA CTGTTTCGGGC TTTTTTGTTTCTGCG CKO_00644 618960 - 618721 - | hypothetical protein CKO_00645 619682 - 618963 - | hypothetical protein CKO_00646 620733 - 619849 - | cytidine deaminase TERM 784 620853 - 620843 - R 85 -6.8 -5.01042 | overlap 620845 AACTTAAATTAAAAA TGCG CGA CGCA TCGCAAATTTTAACC CKO_00647 621558 - 620863 - | hypothetical protein CKO_00648 621953 - 621555 - | hypothetical protein TERM 785 621840 - 621816 - G 72 -3.5 -4.72007 | CGCCAGTAAAACAAA CAGAATCAACA TGC CGATGATGCTG CCGGGAATCGTGATA TERM 786 622081 - 622059 - R 83 -13.4 -3.12005 | overlap 622046 622051 TAGACAACGGGAACA TCGGGCAACG CCC CGTTGCCCGC GCTAAACCTGCGCCA CKO_00649 623039 - 622083 - | hypothetical protein TERM 787 623321 - 623365 + G 83 -9.9 -4.11216 | gap 1, overlap 623310 623322 CGGCGCGGGTCTGCT GGGGCTGACGGCAGGGGCGC TATTGT GCGGCCC-GCTGTCAGACCG TTTTGGCCGTAAACG TERM 788 623322 - 623364 + G 84 -13.4 -3.06515 | gap 1, overlap 623310 623321 GGCGCGGGTCTGCTG GGGCTGACGGCAGGGGCGC TATTGT GCGGCCC-GCTGTCAGACC GTTTTGGCCGTAAAC TERM 789 623853 - 623841 - g 70 -6.9 -4.13767 | GCCGCCATTTCAAAA GGCAG TAT CCGCC AGCTTTTTATTGGGC CKO_00650 623049 - 624476 + | hypothetical protein CKO_00651 624488 - 625525 + | hypothetical protein CKO_00652 625541 - 626242 + | hypothetical protein CKO_00653 626248 - 626895 + | hypothetical protein TERM 790 627083 - 627117 + G 70 -10 -3.36991 | gap 1, overlap 627082 627086 627114 TTCCGCGCTGGACAG CCTCGGCGTTGGCGA AGTGGC TCGCCAGCGC-GCGG TCTTTACCGATCATA CKO_00654 626910 - 628103 + | salicylate hydroxylase TERM 791 628145 - 628125 - f 93 -15.5 -2.81966 | opp_overlap 628125, overlap 628115 628127 TTAAACCGCACCACA GAGGCGCTA CCA TAGCGCCTC TTTTTTTGCAGGTAA TERM 792 628125 - 628145 + F 100 -15.5 -5.42259 | opp_overlap 628125 628115 628127 TTAAACCGCACCACA GAGGCGCTA CCA TAGCGCCTC TTTTTTTGCAGGTAA TERM 793 628143 - 628127 - f 80 -12.3 -2.95491 | opp_overlap 628125, overlap 628125 628115 AAACCGCACCACAGA GGCGCTA CCA TAGCGCC TCTTTTTTTGCAGGT TERM 794 628356 - 628334 - g 75 -11.2 -3.36492 | opp_overlap 628341 CCCGGAACTGCACAA TGCCAGCCGC ACG GCGTCCGGCA CAGTCGTGCGTATTC CKO_00655 628170 - 629108 + | tRNA-dihydrouridine synthase C CKO_00656 629127 - 629276 + | hypothetical protein TERM 795 629297 - 629314 + F 76 -4.3 -5.0925 | opp_overlap 629299 ATCATCTGTTTCAAT TATAATT TTCT AATTATA TTTTTCCTTTTCCAA TERM 796 630358 - 630373 + G 73 -6 -4.39426 | TTTAGGCAGCGTTGA CGCCGC AAAA GCAGCG TTTTATCCCGATATC CKO_00657 629411 - 630847 + | multidrug resistance outer membrane protein MdtQ TERM 797 630875 - 630922 + T 100 -15.6 -4.07568 | opp_overlap 630876 630883 630886, overlap 630876 ATGGCGCTTTAATGC AGGCCAAATAAGCCTGAAGCGC TAAG GCGCATCAGGCTTATTGCGCCG TTTTAACCACCAGCG TERM 798 630921 - 630876 - T 100 -19.1 -2.52464 | opp_overlap 630875 630876, overlap 630883 630886 TGGCGCTTTAATGCA GGCCAAATAAGCCTGAAGCGC TAAG GCGCATCAGGCTTATTGCGCC GTTTTAACCACCAGC TERM 799 630876 - 630921 + T 100 -19.1 -3.04398 | opp_overlap 630876 630883 630886, overlap 630875 TGGCGCTTTAATGCA GGCCAAATAAGCCTGAAGCGC TAAG GCGCATCAGGCTTATTGCGCC GTTTTAACCACCAGC TERM 800 630914 - 630883 - T 100 -17.4 -3.6215 | opp_overlap 630876 630875, overlap 630876 630886 TTAATGCAGGCCAAA TAAGCCTGAAGCGC TAAG GCGCATCAGGCTTA TTGCGCCGTTTTAAC TERM 801 630911 - 630886 - T 100 -14.7 -3.94188 | opp_overlap 630876 630875, overlap 630883 630876 ATGCAGGCCAAATAA GCCTGAAGCGC TAAG GCGCATCAGGC TTATTGCGCCGTTTT CKO_00658 631465 - 630896 - | hypothetical protein TERM 802 632021 - 632048 + G 73 -6.2 -4.38154 | overlap 632023 TCCGCTGGTGTGGCT CTGTGCGTTAGT CGGT ACTGTCGCACTG TTTTATACCGGCTAT CKO_00659 631629 - 632216 + | hypothetical protein TERM 803 632540 - 632526 - g 70 -7 -4.07687 | ACGCTGTGGCGAAAA CCGCGG CTG CCGCCG TAGCGTCTCAACCGG TERM 804 633339 - 633328 - g 75 -3.6 -4.87665 | overlap 633335 633336 GTTGAGTTACAAAAA GCAG AAAG CCGC GCAGATGGCCGCAGC CKO_00660 632447 - 633382 + | D-alanyl-D-alanine endopeptidase CKO_00661 635296 - 633494 - | D-lactate dehydrogenase TERM 805 633617 - 633597 - G 83 -6 -4.91109 | opp_overlap 633598, overlap 633598 TTTTCACGATAAAAA CGCGCCAG CGTCT CCGGCGCT TTGTACAAATGACCA TERM 806 633616 - 633598 - G 71 -9.5 -3.54183 | opp_overlap 633598, overlap 633597 TTTCACGATAAAAAC GCGCCAG CGTCT CCGGCGC TTTGTACAAATGACC TERM 807 633644 - 633684 + g 80 -9.8 -4.00532 | ACCAACGTTATGCTC TGCCGGATATTGC-GCGCCG CGC TGGCGCAGCAGT-TCCAGCA TTTGCTCTTTCAGCG TERM 808 633972 - 633984 + g 70 -6.9 -4.08767 | opp_overlap 633972 633973, overlap 633973 GTACAGGCAAAGAAA TCGCC CTC GGCGG TTTTGAAAAACTCGG TERM 809 635091 - 635130 + g 73 -5.6 -4.58395 | gap 1, opp_overlap 635080 635077, overlap 635092 ACCACGGCCAGCGCT TCGCCC-TGACCGGAACGG AAC CCCTTGCGGTAGCGGGCGG TTTTTGCAGGATCGG TERM 810 636652 - 636633 - g 80 -12.1 -3.38046 | overlap 636631 CCTGCATCGCAAAGA CGCGCGC GACGTT GCGCGCG AAAGTCTGGTGCTGC CKO_00662 635302 - 637773 + | hypothetical protein TERM 811 638010 - 637991 - g 70 -3.4 -4.6902 | opp_overlap 637990 637996 TGACAATTTCAAAAA CAGGGGCG GGGG CGCTGCTG CTGTTAGCGGCGGTC CKO_00663 637975 - 638892 + | hypothetical protein TERM 812 639835 - 639847 + G 95 -6.9 -5.40072 | opp_overlap 639829 639830 CATGTACAACTGCCG CTGGC GTT GCCGG TTTTTTTACGCAGCC CKO_00664 638899 - 640074 + | hypothetical protein TERM 813 640740 - 640765 + G 74 -2.4 -5.00616 | opp_overlap 640732 TGGAAATGCTGACCG CGCCGGCGAA TGATTT TGTGCAGGCG TTTTTTGGGCGCAGC CKO_00665 640064 - 641014 + | hypothetical protein CKO_00666 640998 - 641729 + | hypothetical protein CKO_00667 642658 - 641927 - | hypothetical protein TERM 814 642317 - 642340 + g 71 -7.4 -4.015 | gap 1, overlap 642317 GTGCGTGGTGAGCGT C-TGGGCGGGG TAA TCCTGCCCACG TTCTTTAATCCATAG CKO_00668 642881 - 644566 + | hypothetical protein CKO_00669 644563 - 645282 + | putative two-component response-regulatory protein YehT CKO_00670 645329 - 645799 + | hypothetical protein TERM 815 645815 - 645845 + T 71 -10.5 -2.74792 | gap 1, opp_overlap 645808 645824, overlap 645814 645837 TAAGATAAGCGGTAG GCCGGAT-AAGGTG TTTG CACCGTCATCCGGC ATTTGCGCCTGATGG TERM 816 645932 - 645914 - T 100 -14.6 -5.4505 | opp_overlap 645914 TTCTGGAATAAAAAA GCCGGAGA ATG TCTCCGGC TTTTTGTTTATTTCA TERM 817 645914 - 645932 + T 100 -14.6 -5.5454 | opp_overlap 645914 TTCTGGAATAAAAAA GCCGGAGA ATG TCTCCGGC TTTTTGTTTATTTCA CKO_00671 647973 - 645940 - | methionyl-tRNA synthetase TERM 818 646347 - 646375 + g 78 -11.7 -3.30635 | opp_overlap 646347, overlap 646348 TCGAGGCTTCAACCA GCGCATCGACCTG TTT CATGTCGATGCGG TTATACAGCGCTTTG TERM 819 646375 - 646347 - G 72 -11.7 -2.71731 | opp_overlap 646347 646348 TCGAGGCTTCAACCA GCGCATCGACCTG TTT CATGTCGATGCGG TTATACAGCGCTTTG TERM 820 646348 - 646374 + g 83 -15.2 -2.5806 | opp_overlap 646347, overlap 646347 CGAGGCTTCAACCAG CGCATCGACCTG TTT CATGTCGATGCG GTTATACAGCGCTTT TERM 821 647561 - 647574 + g 75 -3.8 -4.88736 | opp_overlap 647556 TTTACAAAACGATCC GGCA GGAACA TGCC TTTTTCTGGATCGTA TERM 822 648205 - 648163 - g 71 -9.6 -3.61103 | opp_overlap 648187 648188 CAATCCCAGGCTAAA TCACCAGAGACCCTGCGCGC GAT GGTCGCCGGGACGCTGGCGA ATTTTCAGCACCCAA CKO_00672 648139 - 649248 + | putative ATPase TERM 823 649273 - 649314 + F 71 -9.7 -3.17212 | gap 1, overlap 649276 AACCGTCAGGATGAC TGCTATTCACCGCATCAGAA ATA TATTGATGCGGTGAATA-TA TTAATGAAATAATCA TERM 824 649276 - 649312 + F 100 -16.1 -3.1478 | overlap 649273 CGTCAGGATGACTGC TATTCACCGCATCAGAA ATA TATTGATGCGGTGAATA TATTAATGAAATAAT CKO_00673 649472 - 649804 + | hypothetical protein TERM 825 649825 - 649854 + F 100 -8.7 -5.7827 | opp_overlap 649825 CGTGAATACGAGAAA GTCCACATTATTT TCAT GAATGATGTGGGC TTTTTTATTTATATT CKO_00674 650083 - 650616 + | hypothetical protein TERM 826 650630 - 650653 + TF 100 -15.3 -4.10164 | AACACACCCTTTTAG TCGGCGGCG TTTTGT CGCCGCCGA TTTCTCTGATAATAA CKO_00676 650756 - 650613 - | hypothetical protein TERM 827 650721 - 650738 + Gg 77 -7.7 -4.32857 | overlap 650723 TGGCTGGTGCTGTAA TGCCTGC GTGG GCAGGTA TTTATATTTACGGCA TERM 828 650862 - 650887 + GH 83 -8.3 -4.38927 | opp_overlap 650881 ACGGCGACACCAGTT TGCCGCCTGAA AAAA TTCAGGTGCCA TTTGTTCTGTCACCG TERM 829 651194 - 651175 - gH 75 -3.6 -4.96106 | CATAAATATCAAAAA TAATTCAG CAAA CTGGATTA CCATCCCTGAAATTG CKO_00675 650681 - 651361 + | hypothetical protein CKO_00677 651376 - 653862 + | hypothetical protein CKO_00678 653875 - 654855 + | hypothetical protein TERM 830 654872 - 654899 + T 88 -8.5 -4.74989 | opp_overlap 654872, overlap 654867 TCATTTCTCTGAAAA CGCGTCCTTTT CTGAAT GAAAGGACGTG TTTTGTCTGTTGTTT CKO_00679 655273 - 654929 - | hypothetical protein CKO_00680 655660 - 656448 + | hydroxyethylthiazole kinase TERM 831 656790 - 656779 - g 74 -7.2 -4.08216 | opp_overlap 656779 656779 TGATGCTGGCGAAAA GCGG TGAT CCGC TGCTTTCTCCGTCGG TERM 832 657075 - 657065 - g 70 -3.2 -4.77036 | GGTGATGACCAAAAA TACC CAC GGCA CCGGGTGTACGCTGT TERM 833 657183 - 657157 - g 74 -2.9 -4.91873 | gap 1, overlap 657151 TACAGGAAGCAAAAA CCTGG-CTTTCG GCGG CGTTAGCCCAGG CGGATACGCTGGAGG CKO_00681 656445 - 657245 + | phosphomethylpyrimidine kinase TERM 834 657976 - 657926 - g 93 -13.3 -3.85539 | opp_overlap 657925 CAGATGGACAGCAAA GTGCCGGTGCTGGTGATCAAGCA GGTGG CGCTTGACCAGCAACAGCGGCCC ATTGAATACAGCATC CKO_00682 657290 - 658036 + | hypothetical protein CKO_00683 658975 - 658010 - | hypothetical protein TERM 835 658307 - 658289 - G 70 -8.8 -3.65199 | AACCGGTGAGGCAAA CGCCGC AAGCCAG GCGGCG CCAAACGCGTTAGGT CKO_00684 659976 - 658972 - | hypothetical protein CKO_00685 661265 - 659973 - | hypothetical protein TERM 836 660400 - 660390 - G 87 -2.4 -5.63517 | GCCGTAAACAAAAAA GCCG TAG CGGA TTGCCGCAGTGATAA TERM 837 660504 - 660522 + g 74 -4.5 -4.7254 | GGAGAACTGGCCCAG CGTCATC CAGCC GGTGGCG TTTTTCATGCCGACT CKO_00686 661465 - 661262 - | hypothetical protein TERM 838 661749 - 661770 + G 72 -3.7 -4.72007 | gap 1, overlap 661743 GAACATTCTGCCGGG GCGTCGTTTG CCG CAAACC-CGC TTTATTTTGATCCAA CKO_00687 661503 - 662555 + | fructose-bisphosphate aldolase TERM 839 662563 - 662592 + T 100 -15.1 -3.44146 | gap 1 TTGCCTGATGTCACG TACCCCTCCCCAGG TTT TC-GGGGAGGGGTA TTGGTTATCAGGACG CKO_00688 664239 - 662617 - | hypothetical protein TERM 840 663129 - 663141 + g 74 -4.7 -4.82901 | overlap 663107 663130 GCGTGACGGCGTCCG ACGCC TGC GGCGC TTTTTCTGACACCCG TERM 841 663254 - 663266 + g 74 -10.5 -3.61178 | AGCTGATCGATAGCC GCGCC CGC GGCGC TTTGCCCTCCCTCAA TERM 842 663921 - 663946 + g 90 -8.2 -4.82901 | gap 1 GCGCCGCATCGCCTT CGGCGCTCACG GGGAG CG-GCGCGCCG TTTTTATCCAGAACC TERM 843 664178 - 664137 - G 79 -13.1 -2.97747 | gap 1, overlap 664141 664161 664163 GCGTGACATGAGAGA GCAACGTGCCGCTCAGGT CGAAGAT ACCTGCGCGG-ACGCTGC CTGAACCAACATCCA CKO_00689 665072 - 664236 - | hypothetical protein TERM 844 666109 - 666151 + G 100 -16.4 -3.14132 | opp_overlap 666123 GTTTGAGATTGTGGA TTCCGGCGACACCACAATAC GTC GTATTGAGATCTCGCCGGAA TTGATCGCCAGCCAG CKO_00690 665150 - 666181 + | hypothetical protein CKO_00691 667119 - 666178 - | hypothetical protein TERM 845 666773 - 666786 + g 71 -8.1 -3.88787 | opp_overlap 666772 AACCCGGAACCAATG CCGAC TACC GTCGG TTTGTCGCCCTGTAA TERM 846 667242 - 667253 + H 72 -5.8 -4.50976 | ATTTGTAATTTTATA GAGC AATT GCTC TTTTGTGATCTACGG CKO_00692 667330 - 668697 + | hypothetical protein TERM 847 669444 - 669462 + G 70 -5.2 -4.46112 | overlap 669445 TATTGGCGTTGGCGC GGTATCGC CCG GCGATGCG TTTATTTCACTGGGG TERM 848 670008 - 669983 - g 73 -8.9 -3.91473 | gap 1, opp_overlap 669992, overlap 669973 669984 ACAAAGGCGGAGAAA CCGGCGGCGCGC TGG GCGCGGCGC-GA CTGGCGTGCCTTGCG CKO_00693 668707 - 670170 + | hypothetical protein TERM 849 670211 - 670185 - f 100 -10.2 -4.77567 | gap 1 ATTTCTATAACAAAA GCC-CTCCGGT GAATGT ACCGGAGTGGC TCCCTGCACCCTAAA TERM 850 670648 - 670671 + G 78 -13.2 -2.58249 | gap 1, opp_overlap 670653, overlap 670647 670650 TAACGTCCGTAGCGA CAGCACCAGCG CCG CGCTGG-GCTG GTTCTGGGCGGTCTA TERM 851 671344 - 671365 + G 70 -9.3 -3.62522 | overlap 671352 GCTTTCCAACTTCCT CGCCCCGGC GATC GCCGTGGTG TTGTTACCGCACTTC CKO_00694 670238 - 671515 + | hypothetical protein TERM 852 671524 - 671545 + F 100 -14.4 -4.56597 | TTCTTAATGATGTCG GGCCCGGC TGCGCT GCCGGGCC TTTTTAAGGCGGCAA CKO_00695 671561 - 672226 + | hypothetical protein CKO_00697 673204 - 672305 - | lipid kinase CKO_00696 672238 - 672387 + | hypothetical protein TERM 853 673144 - 673162 + gT 76 -8.8 -3.71917 | opp_overlap 673126, overlap 673126 673123 CTATCGCGTCGCGCA GGGGCTGA TTA TCAGCGCC TTTGCCATTTAAAAT TERM 854 673356 - 673311 - TR 100 -22.9 -4.18351 | gap 1, opp_overlap 673317 673326, overlap 673314 673326 AAAGGAAAGGATAAA GACTCAGCCAAAAAAGCCCCGG TTT CCGGGGCTTTTTTGGCT-ATTC GAGGATGAGTTGCTC TERM 855 673354 - 673314 - TR 100 -23.5 -2.79007 | opp_overlap 673317 673326, overlap 673311 673326 GGAAAGGATAAAGAC TCAGCCAAAAAAGCCCCGG TTT CCGGGGCTTTTTTGGCTAT TCGAGGATGAGTTGC TERM 856 673317 - 673351 + Tr 100 -27.4 -3.03243 | opp_overlap 673314 673311 673326, overlap 673326 AAGGATAAAGACTCA GCCAAAAAAGCCCCGG TTT CCGGGGCTTTTTTGGC TATTCGAGGATGAGT TERM 857 673342 - 673326 - TR 100 -15.1 -5.09895 | opp_overlap 673326 673317, overlap 673314 673311 GACTCAGCCAAAAAA GCCCCGG TTT CCGGGGC TTTTTTGGCTATTCG TERM 858 673326 - 673342 + Tr 100 -15.1 -5.1615 | opp_overlap 673314 673311 673326, overlap 673317 GACTCAGCCAAAAAA GCCCCGG TTT CCGGGGC TTTTTTGGCTATTCG CKO_00698 673725 - 673351 - | hypothetical protein TERM 859 673508 - 673534 + g 70 -8.7 -3.64703 | opp_overlap 673509, overlap 673509 GTCATCCCTCTGTAA ATGCGCCATGC CGCTT GCATGGTGCAA TTTCGCTCAGAAAGA TERM 860 673533 - 673509 - G 71 -10 -3.53444 | opp_overlap 673509 673508 TCATCCCTCTGTAAA TGCGCCATGC CGCTT GCATGGTGCA ATTTCGCTCAGAAAG TERM 861 673509 - 673533 + g 72 -12.2 -2.78679 | opp_overlap 673509, overlap 673508 TCATCCCTCTGTAAA TGCGCCATGC CGCTT GCATGGTGCA ATTTCGCTCAGAAAG TERM 862 673816 - 673798 - R 72 -8.1 -3.74077 | gap 1, opp_overlap 673799, overlap 673799 GTTTACAGATGGAAA CGGGCGGG TTTC CCCGCC-G TCTGTCAGTAGGTTG CKO_00699 674084 - 673821 - | hypothetical protein TERM 863 674143 - 674162 + r 70 -9.4 -3.36492 | opp_overlap 674143 ATGGCAGGTCTTAAA TATAGGGT TTTA ACCCTATA TTGTCAAATTAAACC TERM 864 674162 - 674143 - R 72 -9.4 -3.55563 | opp_overlap 674143 ATGGCAGGTCTTAAA TATAGGGT TTTA ACCCTATA TTGTCAAATTAAACC TERM 865 674351 - 674320 - R 100 -11.7 -5.39721 | overlap 674323 CGATGAGATAAAAAA TAAGCCTGCGTAA GGGAGA TTACGCAGGCTAA GGAGGTGGTTCCTGG TERM 866 674348 - 674323 - R 100 -13.4 -4.77122 | overlap 674320 TGAGATAAAAAATAA GCCTGCGTAA GGGAGA TTACGCAGGC TAAGGAGGTGGTTCC CKO_00701 675846 - 674485 - | hypothetical protein TERM 867 674545 - 674525 - G 83 -7.7 -4.57073 | opp_overlap 674528 GATTCGCCGGAAAAA TTACGCATT AAC AATGCATAA TTCAGATCCATATCC TERM 868 675977 - 675963 - R 100 -8.5 -5.30616 | opp_overlap 675974 GCAGGTAAAGAAAAA CGCCG GATGG CGGCG TAGCGCCTTCTCTGG CKO_00702 676778 - 676056 - | DNA-binding transcriptional regulator BaeR TERM 869 676146 - 676158 + g 76 -5.5 -4.81551 | GTCCAGTGATTCCAG CTTGC GGC GCAGG TTTTTGATGTGGCTG TERM 870 676559 - 676546 - G 74 -3.1 -4.85599 | gap 1 GGCACGTCAGAAAAA CGGCGA ATT TC-CCG GCACAGCGTCAGGCC CKO_00703 678178 - 676775 - | signal transduction histidine-protein kinase BaeS TERM 871 677888 - 677899 + g 77 -7.2 -4.37157 | overlap 677882 GCCATGCGGCGGCAT CCCG GGGC CGGG TTTGTTATCGTCGTT TERM 872 678194 - 678211 + r 76 -4.8 -4.89852 | overlap 678193 678193 TGCGTGCTCCTTTTG CGTCGT GAAATG ACGGCG TTTTTGTGCGTGTCG CKO_00704 679590 - 678175 - | multidrug efflux system protein MdtE TERM 873 679169 - 679125 - G 84 -12.9 -3.41602 | opp_overlap 679166, overlap 679096 CGTACTCGACCAGAA TG-CCGCCCAGCGCCGGGCCG AGCAG CGGCCCGAC-CTGACCGGGCA GCGTGACGAACGTCA CKO_00705 682673 - 679587 - | multidrug efflux system subunit MdtC TERM 874 679898 - 679914 + g 76 -3 -5.07486 | gap 1, opp_overlap 679898 679901, overlap 679901 679910 CCTCAAGCGCAAAAT CGACCAT CATG ATGG-CG TTTTTCTTCACAATG TERM 875 681509 - 681484 - G 70 -5.3 -4.4767 | TCATCGACGACAAAA CCGGTGGCGAT AGTC AGCGCCATCAG CGACAGGTTGTTCAG TERM 876 681914 - 681924 + g 71 -8.2 -3.8512 | overlap 681921 CATCGCCCAGACGCA CGGC GGC GCCG TTGTTGTAGTGGATA TERM 877 682606 - 682556 - G 72 -11.7 -2.75577 | gap 1, overlap 682553 682552 682584 682592 TGACCGGAAAATCCA CCTGCGGCA-GCGGGGCGACCGGC AATA ACCGGAAACCCAGCACGCCGCAGA GCGTAATGGCGATGG CKO_00706 685796 - 682674 - | multidrug efflux system subunit MdtB TERM 878 683727 - 683687 - G 71 -8.2 -3.89346 | TGCTGACGTCAGAAA GCTGCGGAAGCTGCTGGA GTTTT TCCATCAGCTGCGGCACC CAGGTGCTGAGCGCA TERM 879 684500 - 684512 + g 78 -6.2 -4.72486 | opp_overlap 684468 684467 CAGCGCCTTTGAGCG CCGC CGCCA GCGG TTTTTCCCCTTTCTC TERM 880 685771 - 685752 - G 71 -6.4 -4.30987 | opp_overlap 685754 AGGGCGCATAATAAA CAGGCG CGACGGGC CGCCTG TGCTGCTCGGAGGTA CKO_00707 687097 - 685796 - | multidrug efflux system subunit MdtA TERM 881 686266 - 686283 + g 82 -5.5 -5.04385 | GATCCCAGGCTTCAA CGGTCAA TGTT TTGCCCG TTTTTTGCGCCTGTA TERM 882 686619 - 686629 + g 74 -6.8 -4.32857 | opp_overlap 686605, overlap 686607 686605 TCGCGACGGGCATTC GCCA GCG TGGC TTTGTCTTTCGCGAG TERM 883 686882 - 686920 + g 73 -10.3 -3.33696 | gap 1, opp_overlap 686884 CAGCGGGCCGGAACG CATGCCGCGACGTCCTGC GCCA GCCTGACGTTGC-GCATG TTCGTTAGCGCCCGG TERM 884 687015 - 687025 + g 78 -2.4 -5.19261 | ACCACGATTGCTATC ACCC AGC GGGA TTTTTTACTGCCTTT TERM 885 687305 - 687286 - R 86 -11.4 -3.66178 | CGCTGGAACGGGAAA GCCCCTCC CGAG GAAGGGGC CAAAATAAGGAAAGG CKO_00709 688850 - 687483 - | putative chaperone TERM 886 687994 - 688007 + g 72 -3.8 -4.81249 | CACCACGGCAGAACC GGCA ATGCGA TGCC TTTTTCGGTTTCGCC CKO_00711 688971 - 688837 - | hypothetical protein CKO_00710 688971 - 689840 + | 3-methyl-adenine DNA glycosylase II CKO_00712 693137 - 689808 - | putative sensor protein TERM 887 690111 - 690086 - G 77 -7.5 -4.32201 | overlap 690087 690088 TTAAGCAATCGAAAA GCGCCAGGTCA CGGT TGACCTGGCTG AGAACAATGCGACAG TERM 888 690110 - 690087 - G 74 -11 -3.18598 | overlap 690086 690088 TAAGCAATCGAAAAG CGCCAGGTCA CGGT TGACCTGGCT GAGAACAATGCGACA TERM 889 690109 - 690088 - G 81 -14.5 -2.50436 | overlap 690087 690086 AAGCAATCGAAAAGC GCCAGGTCA CGGT TGACCTGGC TGAGAACAATGCGAC TERM 890 692221 - 692248 + g 75 -5.7 -4.54306 | gap 1 GAATATTCCATCGCG TTAC-GAAAGCG TAATT CGCTTTCCGTGA TATTTTTTTGTTCCG TERM 891 692904 - 692894 - G 81 -2.4 -5.31275 | opp_overlap 692894 CGGCAGGAGAAAAAA CGAG TGA CGCG CTTATGCTGCCGAGG TERM 892 692993 - 692971 - G 74 -4.9 -4.82901 | gap 1 GCGTGGCGATAAAAA CCGACCATCA TGAT TGACG-TCGG GAACCACAGCGGCGC CKO_00714 693764 - 693363 - | hypothetical protein CKO_00713 693325 - 693468 + | hypothetical protein CKO_00715 693771 - 694106 + | hypothetical protein TERM 893 694330 - 694347 + G 75 -6.9 -4.39696 | AAATTTCGTACATTT CGTGGCC ACAC GGCTGCG TTTATTGATTTAAGC CKO_00716 694198 - 694779 + | deoxycytidine triphosphate deaminase TERM 894 695122 - 695177 + G 72 -11.1 -3.01712 | gap 2, opp_overlap 695122 695155 695172 CAGGTGATGCTCAAA GGCGCGGTCATCCAGTTGACGCCGC AGACGGAA GCGGCG-CGCCGGGAAGA-CGCGCC TGTTGCGCCAAAAGA CKO_00717 694801 - 696654 + | putative assembly protein CKO_00718 696665 - 696838 + | hypothetical protein CKO_00719 698409 - 696826 - | hypothetical protein TERM 895 697072 - 697087 + g 77 -4.6 -4.89852 | opp_overlap 697033, overlap 697029 697028 ATGGCCGTTGGCGGT CCAGGA GCCG TCCGGG TTTTTCTGAATATCG TERM 896 697597 - 697627 + g 71 -4.8 -4.59773 | gap 2, opp_overlap 697595 ATCCGCCAGCATAGC GGAGG-TGTC-AGC ATCCA GCTCGGCATCCTCC TTTTTCCCGCTGAGC TERM 897 697635 - 697679 + g 71 -11.3 -2.90392 | opp_overlap 697646 697647 CATCCTCCTTTTTCC CGCTGAGCAAATGCATCACCG CTT CGGTGGTGCGCTGGCGCAACG TATGGTTGGCGGATA CKO_00720 698457 - 698645 + | hypothetical protein CKO_00722 698767 - 698639 - | hypothetical protein CKO_00721 698757 - 698882 + | hypothetical protein TERM 898 699732 - 699721 - g 74 -7.2 -4.18018 | TGGTCTGACCGAAAA CGCC GACT GGCG CAACGTCGTGCTGAC CKO_00723 699101 - 700240 + | hypothetical protein TERM 899 700527 - 700498 - g 95 -11.5 -4.65895 | gap 1 CTGGCGATGGAAAAA CGCCATATCGC-CA GAC TGTGCGAGATGGCG CCAGAGATGCGCGGG CKO_00724 700246 - 700689 + | tyrosine phosphatase CKO_00725 700692 - 702854 + | tyrosine kinase CKO_00726 702963 - 703811 + | predicted glycosyl transferase CKO_00727 703862 - 704302 + | putative colanic acid biosynthesis acetyltransferase WcaB TERM 900 704484 - 704470 - gf 79 -10 -3.74693 | CCGCATGTGATTAAA CAGACG CCG CGTCTG ACATCGGTCGCCAAT TERM 901 705065 - 705029 - gf 84 -9.4 -4.35926 | opp_overlap 705033 AGGGCAAACCGAAAA TTGCCGTGGTGGCGCA CGATT TGCGCTATGACGGCAA AACAAACCAGCAACT TERM 902 705082 - 705072 - gf 80 -6.8 -4.67048 | TGACGGCAAAACAAA CCAG CAA CTGG TGCGCGACATAATGG CKO_00728 704299 - 705516 + | predicted glycosyl transferase TERM 903 706229 - 706217 - g 84 -3.3 -5.32944 | opp_overlap 706217, overlap 706210 GCGATAAGGAAAAAA TTGCC ACT GGCGA TTATTTCGTTGGGCG CKO_00729 705491 - 706711 + | putative colanic acid biosynthesis protein TERM 904 706894 - 706883 - g 71 -4.4 -4.57073 | opp_overlap 706883 CAGTTTCTGGAAAAA CTCA ACGG TGAG TTTAACTTACGCTTC CKO_00730 706724 - 707470 + | predicted glycosyl transferase TERM 905 707725 - 707738 + G 91 -9.5 -4.54047 | TGATTACGCCTGGGT CGGCG ATGA CGCCG TTTTATATACGCTGG CKO_00731 707483 - 708040 + | putative colanic acid biosynthesis acetyltransferase WcaF CKO_00732 708064 - 709185 + | hypothetical protein TERM 906 709660 - 709609 - g 70 -6.6 -4.11394 | gap 1, opp_overlap 709623 ATGCCATCGCCAAAA TTGCCGGGATCAAACTGTGCGAGTC CTG GAATCGC-CAGTTTGACCGCGATTA CCGCTCGGTCATGCC CKO_00733 709188 - 710153 + | hypothetical protein CKO_00734 710156 - 710710 + | hypothetical protein TERM 907 711045 - 711063 + G 70 -6.6 -4.07687 | GCCGGATCGGATTAT CGGCGTGG TGC CGACGCTG TTTTGCACGCCGGGT TERM 908 711566 - 711548 - g 74 -2.3 -5.00616 | gap 1, overlap 711549 CGCGGCTGGAAAAAA TGGCC-CG TGAA CGCGGCCT GGATAACGTCAAATT TERM 909 711662 - 711673 + G 74 -7.2 -4.13767 | opp_overlap 711654 TGCAAAAGCGCGGCG CGGC GGAT GCCG TTTTGCCGTCGAAAC CKO_00735 710707 - 711939 + | predicted glycosyl transferase TERM 910 712612 - 712600 - g 81 -4.1 -5.2166 | overlap 712602 712603 GAAGAACTGAAAAAA TACCG TCC CGATA TTCTGGACGCCTGCG CKO_00736 711943 - 713379 + | hypothetical protein TERM 911 713500 - 713479 - f 76 -4.3 -4.93595 | overlap 713481 ACAAAAATTGAAAAA GGCTCTTAC GAGA GTCAGGGCC AACTGTTGCCTGAAG CKO_00737 713528 - 714898 + | hypothetical protein TERM 912 714878 - 714904 + F 83 -10.2 -3.73068 | CGAACGCGAACCCTG CTGACGTTGCTG AAT CAGTAATGTCGG TTCTTCCCTTACCCG TERM 913 715660 - 715670 + G 76 -5.4 -4.75174 | CTGCTCGGTCATCCT CATC CCG GATG TTTTTACCTTCAATA CKO_00738 714953 - 716347 + | putative UDP-glucose lipid carrier transferase CKO_00739 716357 - 717835 + | colanic acid exporter CKO_00741 717999 - 717874 - | hypothetical protein CKO_00740 717945 - 719225 + | putative pyruvyl transferase TERM 914 719224 - 719236 + G 70 -3.4 -4.74801 | opp_overlap 719224 TCGGGGAGGGGAAAT GAAG GTCAG CTTC TTTTTACTGAAGTTC CKO_00742 719222 - 720442 + | hypothetical protein TERM 915 720718 - 720704 - gf 72 -3.5 -4.72272 | gap 1 TTCCGGCAGGAAAAA CGCTGC ATGT GC-GCG GGCGCTTAAGCGGCA CKO_00743 720454 - 721857 + | putative colanic acid biosynthesis protein CKO_00744 721814 - 721957 + | hypothetical protein CKO_00745 722023 - 722916 + | UTP--glucose-1-phosphate uridylyltransferase subunit GalF TERM 916 722961 - 723001 + F 100 -8.5 -5.10163 | gap 1 TAGACAGTTATCACT CGACAATAAGC-TCGACT GTGGAA AGTTGATGCTTATTGCCG TTTTGTTTTGCACTT TERM 917 723566 - 723541 - g 77 -4.9 -4.98255 | opp_overlap 723543 CCTGAATTAGAAAAA TATTTTTTAGA TATC TCTAGAAAATA TTGGGATTTTTATGA CKO_00746 723280 - 724590 + | hypothetical protein CKO_00747 724702 - 724556 - | hypothetical protein TERM 918 724620 - 724632 + g 100 -6.3 -6.28967 | GGTTTTGCAGCATTC TCTGT TTT ACAGA TTTTTTTTGTTTCTA CKO_00749 725086 - 724991 - | hypothetical protein CKO_00750 725467 - 725162 - | hypothetical protein CKO_00748 724971 - 725654 + | hypothetical protein TERM 919 726113 - 726124 + G 70 -3 -4.71708 | ATAATTAATATATCC TATC CGCT GATA TTTTCGTTTATTGTT CKO_00751 725654 - 726934 + | hypothetical protein CKO_00752 726948 - 727709 + | hypothetical protein TERM 920 728254 - 728268 + G 79 -2.8 -5.28481 | TGTGAATATAGCTTT TATCGC TAT GCCATA TTTTTTAATTGGATA CKO_00753 727847 - 728722 + | hypothetical protein TERM 921 728897 - 728909 + G 78 -6.3 -4.72986 | GTCATGTTGCACGTT TATGG TCC CCATA TTTTTCATACAGATG CKO_00754 728735 - 729883 + | hypothetical protein TERM 922 729932 - 729946 + G 74 -4.2 -4.83169 | opp_overlap 729931 729934, overlap 729934 TGAATAAATATAATC CATTGC TAT GCAAGG TTTTTCTCGCAGCAT CKO_00755 729898 - 731334 + | hypothetical protein CKO_00756 731484 - 732890 + | 6-phosphogluconate dehydrogenase TERM 923 732910 - 732928 + F 100 -16 -5.96219 | opp_overlap 732910 TGATTCGCATCAAAA GCCCGGTG ATT CACCGGGC TTTTTTTTGTCCCTA TERM 924 732928 - 732910 - f 100 -16 -4.26076 | opp_overlap 732910 TGATTCGCATCAAAA GCCCGGTG ATT CACCGGGC TTTTTTTTGTCCCTA CKO_00757 733127 - 734293 + | hypothetical protein TERM 925 734306 - 734322 + F 79 -12.3 -2.77182 | opp_overlap 734316, overlap 734304 TAACCTTCTGTTATT GGGGCTA CAA TAGCCCC TGATTGGCTATCAAA TERM 926 735170 - 735184 + G 78 -2.1 -5.16237 | gap 1, opp_overlap 735163 735170 TGATTGAACATGAAT CCACGC GTCC GC-TGG TTTTTTCGTCAAATT CKO_00758 734440 - 735423 + | hypothetical protein TERM 927 735471 - 735485 + T 100 -12.8 -5.0538 | opp_overlap 735471 CCGACCTACAAAAAA CCGGGC ATT GCCCGG TTTTTTCGCATCAGA TERM 928 735485 - 735471 - T 100 -12.8 -5.28176 | opp_overlap 735471 CCGACCTACAAAAAA CCGGGC ATT GCCCGG TTTTTTCGCATCAGA CKO_00759 736114 - 735503 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein CKO_00760 736884 - 736108 - | imidazole glycerol phosphate synthase subunit HisF TERM 929 736278 - 736299 + g 79 -2.9 -5.17576 | CGGAGGCAATCAGCG GTACATGAC AGAC GTCACGGAC TTTTTTCAGTTGCTC TERM 930 736760 - 736802 + g 73 -9.3 -3.84246 | gap 1 AGCTCGTCTGCGCCT TCATCGGC-ATAGCGTTTTG CCAG CGGGACGATATCGCCGATGA TTTCATGATTGCGGA CKO_00761 737603 - 736866 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 931 737142 - 737160 + g 73 -10.2 -3.40403 | opp_overlap 737154 AGTCTCGACCAGCTC CTCCAGCG AAA CGCCGGAG TTCTCCTGCCAGCCG CKO_00762 738193 - 737603 - | imidazole glycerol phosphate synthase subunit HisH TERM 932 737835 - 737809 - G 74 -7.3 -4.08692 | gap 1, overlap 737811 737834 CAATGCCCTGGAAAA GACGATTACCCG CCTG CGGGTAAACG-C GGTTCCAGCCCATAT TERM 933 737834 - 737811 - G 79 -11 -3.63922 | overlap 737809 ATGCCCTGGAAAAGA CGATTACCCG CCTG CGGGTAAACG CGGTTCCAGCCCATA TERM 934 738138 - 738123 - G 73 -10.4 -3.4178 | opp_overlap 738123 ACCAGCGGATCATAA CCGTGG CGCG CCACGG CGGATTTCACCGAGT CKO_00763 739260 - 738193 - | imidazole glycerol-phosphate dehydratase/histidinol phosphatase CKO_00764 740336 - 739257 - | histidinol-phosphate aminotransferase CKO_00765 741637 - 740333 - | histidinol dehydrogenase CKO_00766 742632 - 741643 - | ATP phosphoribosyltransferase TERM 935 741686 - 741696 + g 74 -8.2 -4.00407 | opp_overlap 741682 741680 ACCAGAATAGAGCTG GCGC CGA GCGC TTTCAGTTTTTCCAT TERM 936 742527 - 742544 + g 84 -2.7 -5.34055 | overlap 742530 TAGCTATGCGTAAAC GGGTGTT ATCT AACATTC TTTTTTCCTCTTTAT TERM 937 742530 - 742541 + g 70 -3 -4.71318 | overlap 742527 CTATGCGTAAACGGG TGTT ATCT AACA TTCTTTTTTCCTCTT TERM 938 742624 - 742597 - G 100 -21.4 -5.86061 | opp_overlap 742597 GCGCACCAAAAAAAA GCCCCCGGAAGA ATGA TCTTCCGGGGGC TTTCTCATGCGTTCA TERM 939 742597 - 742624 + g 100 -21.4 -3.99405 | opp_overlap 742597 GCGCACCAAAAAAAA GCCCCCGGAAGA ATGA TCTTCCGGGGGC TTTCTCATGCGTTCA CKO_00767 742754 - 742918 + | hypothetical protein TERM 940 743026 - 743009 - g 81 -8.4 -4.26076 | TTACTGGCACGAAAA CCACGC AGGATG GCGTGG AAGCGGCCCGCATGA CKO_00768 742915 - 743739 + | hypothetical protein TERM 941 744516 - 744543 + G 71 -9.8 -3.61398 | TTACCGCGCTATCTG GCGCAACGCTTT CTGG ACAGCGGTGCGC TTATTGAGAAGAACG CKO_00769 743736 - 744710 + | hypothetical protein CKO_00770 744838 - 744707 - | hypothetical protein TERM 942 744797 - 744824 + g 100 -9.2 -5.47218 | opp_overlap 744800 TGCAAAAAATGACAT TAACCGACGTTT TAAT ACGCGTCGGTTA TTTTTTTGCATCAAA CKO_00772 744987 - 744844 - | hypothetical protein TERM 943 745130 - 745162 + Gr 83 -8.5 -4.4831 | gap 1, overlap 745126 TCACTGACGGTCACG TCGCGA-CGGCGTA TGCCTT TGCGCTGATCGCGA TTCTTTTTACTGCGT CKO_00771 744973 - 746340 + | hypothetical protein TERM 944 746367 - 746385 + Tr 100 -10.3 -5.60993 | opp_overlap 746367 TTCACAGGTAAAAAA CCGGAGA CATGT TCTCCGG TTTTTTTATGCAAAA TERM 945 746385 - 746367 - TR 100 -10.3 -5.1287 | opp_overlap 746367 TTCACAGGTAAAAAA CCGGAGA CATGT TCTCCGG TTTTTTTATGCAAAA TERM 946 746464 - 746510 + Tr 75 -9.6 -3.53444 | gap 1, opp_overlap 746444 746507, overlap 746444 CGCCTGATGGCGCTT CG-CTTATCAGGCCTACGG CTGCCTATTT TCGTAGGCCGGATAAGGCG TTTACGCCGCCATCC CKO_00773 747972 - 746548 - | exonuclease I TERM 947 747201 - 747211 + g 83 -8.2 -4.42386 | opp_overlap 747198 747201 GATCCACCATAATGA CCGC GTT GCGG TTTTCTGGATGCCAG TERM 948 748258 - 748278 + G 72 -4 -4.82901 | gap 1 GAATCTTTCTTCCGC TCTGGCTGC CGAC GT-GCCAGA TTTTTCTCCCCAGCC TERM 949 748563 - 748577 + G 74 -10 -3.70773 | TTTCGGTTCGGGATC TCAGCC GGG GGCTGA TTGTTGACTCTGGAA CKO_00774 748106 - 749368 + | D-alanyl-D-alanine carboxypeptidase TERM 950 749455 - 749484 + F 75 -9.5 -3.53012 | opp_overlap 749455 CCTTTATATGCAAAA TCTTATGCTGTGT TTAT ATACAGTATAAGA TTTGCCGGAGGGGAC TERM 951 749541 - 749582 + F 100 -20.3 -2.65815 | gap 1, opp_overlap 749541 749543, overlap 749543 CAATGCATTATGGAA CACCGTCGACCTGATACGCG CAG CGCC-ATCGGGTCGACGGTG TGCTATCAGTCTCAG TERM 952 749582 - 749541 - f 100 -20.3 -3.10641 | gap 1, opp_overlap 749541 749543, overlap 749543 CAATGCATTATGGAA CACCGTCGACCTGATA-CGC GCA GCGCCATCGGGTCGACGGTG TGCTATCAGTCTCAG TERM 953 749543 - 749580 + F 100 -17.1 -2.87026 | gap 1, opp_overlap 749543 749541, overlap 749541 ATGCATTATGGAACA CCGTCGACCTGATACGCG CAG CGCC-ATCGGGTCGACGG TGTGCTATCAGTCTC TERM 954 749580 - 749543 - f 100 -17.1 -3.10975 | gap 1, opp_overlap 749541 749543, overlap 749541 ATGCATTATGGAACA CCGTCGACCTGATA-CGC GCA GCGCCATCGGGTCGACGG TGTGCTATCAGTCTC CKO_00775 749617 - 750084 + | DNA gyrase inhibitor CKO_00776 750228 - 751286 + | hypothetical protein CKO_00777 751393 - 751794 + | hypothetical protein CKO_00778 752538 - 751828 - | hypothetical protein CKO_00779 753986 - 752787 - | propionate kinase CKO_00780 754438 - 753986 - | hypothetical protein CKO_00781 754796 - 754443 - | hypothetical protein CKO_00782 755347 - 754793 - | hypothetical protein CKO_00783 756705 - 755350 - | hypothetical protein TERM 955 755669 - 755683 + g 74 -7.8 -4.08767 | GCGGGATTCAGCGGG CCTTCG TAA CGGAGG TTTTGCGCCCGTAGC CKO_00784 757814 - 756702 - | hypothetical protein TERM 956 756861 - 756871 + g 70 -6.8 -4.15565 | opp_overlap 756860 756861 GGCGAATGAAGGAAT CGCA CAC TGCG TTTTGAGCTGCTCAA CKO_00785 759210 - 757825 - | hypothetical protein TERM 957 759232 - 759245 + r 73 -9.5 -3.3514 | GTTCTCACGTTAATT GCCGC AATG GCGGC TTGTGCAATATCCAT CKO_00786 760217 - 759207 - | hypothetical protein CKO_00787 760500 - 760225 - | hypothetical protein CKO_00788 760995 - 760504 - | hypothetical protein CKO_00789 761624 - 760992 - | hypothetical protein TERM 958 761458 - 761471 + g 79 -3.1 -5.28778 | gap 1, overlap 761458 761459 GCCGCATATTGCCCT G-GCTG GAG CAGCGC TTTTTTCTCGCTGAT CKO_00790 762046 - 761636 - | hypothetical protein TERM 959 761928 - 761973 + g 74 -7 -4.26076 | gap 1, opp_overlap 761967, overlap 761929 TGATCGGCAAAACTG GCACCGGTGATGATGGC GGACTGCACGGAG GCCA-CATCACCGGTGA TTTTGATCACCGTCC CKO_00791 762412 - 762137 - | hypothetical protein CKO_00792 762782 - 762432 - | hypothetical protein CKO_00793 764604 - 762772 - | hypothetical protein TERM 960 764207 - 764166 - G 72 -12.3 -2.71731 | overlap 764186 CGGAGGCGTTAATCA TGGTGGCGACATCGGCG AAATCGAA CGCCGATGACACGACCA GGATATAAGGCGTAT TERM 961 764280 - 764291 + g 74 -7.2 -4.21936 | overlap 764270 CCACACCCAGACCGA CCCC GCCT GGGG TTTTAGGGTTATGGC TERM 962 764406 - 764425 + g 76 -3.4 -5.00616 | opp_overlap 764397 764405 764406 GGATAAGCGAAATAT CGCTGACA TTGA TGCCTGCG TTTTTTGCCGCAAGC CKO_00794 765138 - 764620 - | hypothetical protein TERM 963 765164 - 765180 + r 82 -7.9 -4.59773 | opp_overlap 765158, overlap 765157 765166 TTTGTTAAAGCGCCA CGCGCAG TTC CTGCGGG TTTTTGCCCGTCACG CKO_00795 765827 - 765153 - | hypothetical protein CKO_00796 767502 - 765838 - | hypothetical protein TERM 964 767090 - 767108 + g 77 -3.7 -5.08824 | opp_overlap 767091, overlap 767075 767091 TGCGCCTGCTGAGAA GGCGTGC GGCGG GCGCGCA TTTTTTGCATCGCCA CKO_00797 768333 - 767521 - | hypothetical protein TERM 965 767770 - 767802 + g 78 -6.8 -4.57073 | gap 1, opp_overlap 767769 767767 767766 767801 GGCGCCGACAATCAC GCCGCAGGCGCGGCC AATT GGC-GCGCCAAAGGC TTTTTCAAGCGCATA CKO_00798 768614 - 768330 - | hypothetical protein TERM 966 768427 - 768449 + g 100 -12.6 -4.25104 | overlap 768416 ACGTTGCGTGCGGCA GCGGCGCCCG CAT CGGTTGCCGC TTTTACTGCGCCAAC CKO_00799 769138 - 769947 + | hypothetical protein TERM 967 770040 - 770019 - f 76 -8.7 -4.11751 | opp_overlap 770020, overlap 770020 ACGAACTGGTCAAAA CGTCTCCCA CGGA TGGGAGACT TTTGTTATTGTCCCT TERM 968 770039 - 770020 - f 80 -12.2 -3.06569 | opp_overlap 770020, overlap 770019 CGAACTGGTCAAAAC GTCTCCCA CGGA TGGGAGAC TTTTGTTATTGTCCC TERM 969 770020 - 770039 + F 100 -12.2 -4.95547 | opp_overlap 770020 770019 CGAACTGGTCAAAAC GTCTCCCA CGGA TGGGAGAC TTTTGTTATTGTCCC CKO_00800 770153 - 771064 + | hypothetical protein CKO_00801 771231 - 771079 - | hypothetical protein CKO_00803 771653 - 771501 - | hypothetical protein CKO_00802 771636 - 773015 + | cobyrinic acid a,c-diamide synthase TERM 970 773338 - 773358 + G 76 -10.3 -3.64703 | overlap 773339 TGCCCGCGATGTTGA ACGCCCGCT GCG GGCGGGCGA TTTAGCTGAAAGCCG TERM 971 773339 - 773357 + G 79 -13.8 -2.78679 | overlap 773338 GCCCGCGATGTTGAA CGCCCGCT GCG GGCGGGCG ATTTAGCTGAAAGCC CKO_00804 773012 - 773971 + | cobalamin biosynthesis protein TERM 972 774171 - 774202 + G 83 -15.2 -2.64877 | gap 1, overlap 774168 774167 774163 TTTCCGATGACGCGC TGGAGCGACTCTGCG CGG CGCTGAGTCGC-CCA TCCATTATCTATACC CKO_00805 773984 - 774616 + | precorrin-8X methylmutase CKO_00806 774613 - 775752 + | cobalt-precorrin-6A synthase TERM 973 775964 - 775976 + G 70 -6.9 -4.09685 | overlap 775920 775919 CGTGGTGCTGGCGTC CGGCG ATC CGCTG TTTTACGGCATCGGG CKO_00807 775746 - 776351 + | cobalt-precorrin-6Y C(5)-methyltransferase TERM 974 776582 - 776562 - g 84 -8.9 -4.25104 | opp_overlap 776549 GTTGCTGGATGAAAA CCGCCAGCA TTT TGCCTGCGG CAATATCGACATTCT CKO_00808 776341 - 776910 + | cobalt-precorrin-6Y C(15)-methyltransferase CKO_00809 776903 - 777676 + | hypothetical protein CKO_00810 777657 - 778712 + | cobalamin biosynthesis protein CbiG TERM 975 779278 - 779257 - g 74 -4.3 -4.72272 | overlap 779265 GTCCGCCAGCAAAAA CGCGCAAAC GCCG GTTGGCGTG GTGAAGTCGGCCGGG CKO_00811 778712 - 779437 + | hypothetical protein CKO_00812 779434 - 780219 + | cobalt-precorrin-6x reductase TERM 976 780304 - 780343 + G 71 -10.1 -3.57561 | gap 2, overlap 780305 780308 GAACATTGTGGCCTG C-GAACGCGATCT-GGCAG CCAG CTGCCCGGATCGCGATCTG TTTCGCGCGTTCACC TERM 977 780305 - 780341 + G 88 -13.8 -3.36569 | gap 1, overlap 780304 780308 AACATTGTGGCCTGC GAACGCGATCT-GGCAG CCAG CTGCCCGGATCGCGATC TGTTTCGCGCGTTCA TERM 978 780308 - 780338 + G 81 -14.1 -2.54504 | gap 1, overlap 780305 780304 ATTGTGGCCTGCGAA CGCGATCT-GGCAG CCAG CTGCCCGGATCGCG ATCTGTTTCGCGCGT CKO_00813 780230 - 781024 + | hypothetical protein TERM 979 781446 - 781436 - g 87 -8.2 -4.56597 | opp_overlap 781435 781438, overlap 781437 781438 CCGCCCGCGCAAAAA CGCC GCT GGCG ATGGAACAACAATCG TERM 980 781660 - 781688 + G 71 -4.4 -4.60255 | opp_overlap 781662, overlap 781662 TGGCGTCACCTGAAT GAGGTCAGCGAC GAGCA GCCGCTGCCCTA TTTTTCGACCATTCT CKO_00814 781021 - 781734 + | cobalt-precorrin-2 C(20)-methyltransferase CKO_00815 781731 - 782468 + | cobalt transport protein CbiM CKO_00816 782470 - 782751 + | cobalt transport protein CbiN TERM 981 782783 - 782800 + G 75 -4.1 -4.84274 | overlap 782784 AGCCGCTGGCTTCAT GTTACGC CGGT GCGTAAG TTTTTGCTCTGGTTG TERM 982 782838 - 782859 + G 84 -13.7 -3.05963 | TGATTCTGGCCTTTA CCCTGCCTC CTTT GGGGCAGGG TATTGAACTGGCGCT TERM 983 782921 - 782944 + G 79 -7.4 -4.42765 | overlap 782922 ATTTCGTTCTGGCGC TGGTGTCGCT GGAT GGCGATACCG TTTGGTTTTTTAAGC TERM 984 783257 - 783273 + G 71 -5.8 -4.24948 | gap 1, opp_overlap 783242 783267, overlap 783260 783267 783271 GCGCTGGCCATTCAT CGC-GCG CAAA CGCTGCG TTTTGGCTATCGTAG CKO_00817 782738 - 783415 + | hypothetical protein TERM 985 783701 - 783722 + G 77 -7.3 -4.34402 | overlap 783702 AACAAATTTTTTATA CCGATATCG ACAG CGATATCGC TTTTAGTCTGCGAAA TERM 986 783702 - 783721 + G 71 -10.8 -3.2032 | overlap 783701 ACAAATTTTTTATAC CGATATCG ACAG CGATATCG CTTTTAGTCTGCGAA CKO_00818 783424 - 784239 + | cobalt transporter ATP-binding subunit TERM 987 784490 - 784476 - g 74 -7.8 -4.07568 | opp_overlap 784477 784480, overlap 784480 CCGGTCCTGCTAAAA CCGACC AGC GATCGG AAAGCGCAGGTGGTG CKO_00819 784236 - 785756 + | cobyric acid synthase CKO_00820 785753 - 786298 + | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase TERM 988 786313 - 786323 + G 85 -6.8 -4.91429 | overlap 786311 786310 AGTAAGTTGTTCTGG GCGA TGC TCGC TTTTATTTCGCGTTT TERM 989 786552 - 786565 + G 74 -2.4 -5.00616 | CGACGGTCTGGCGGA TACC TGTGAC GGTA TTTTTTCCGCCCGCC CKO_00821 786295 - 787038 + | cobalamin synthase CKO_00822 787052 - 788122 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CKO_00823 788232 - 789164 + | hypothetical protein CKO_00824 790041 - 789139 - | hypothetical protein CKO_00825 790152 - 790742 + | hypothetical protein TERM 990 791148 - 791119 - g 70 -7.1 -4.17491 | gap 1, opp_overlap 791133 791143 AGCAAATCTTTAAAA GCTTCCCCGTCGGC CCT GCCGG-GGAAAAGC AGGTTGCTTTCTTTC TERM 991 791235 - 791254 + G 84 -3.4 -5.42259 | overlap 791239 GTGAATGTTTTCATT GCGACCGG CTAT CCGCTGGC TTTTTTTAGCACTAC TERM 992 791574 - 791599 + G 73 -10.5 -3.36878 | gap 1 CGCGACGATCGGGCG GCGAT-TCAGCG GGC CGCTGACGTCGC TTATCAATCCCTGGG CKO_00826 790767 - 791846 + | hypothetical protein TERM 993 791925 - 791902 - T 91 -11 -4.37092 | AGTTGCCTGATAAAA GGGCCGAATA ACCA TTTTCGGCCC TGGCGTGCATCATTT TERM 994 791956 - 791969 + T 78 -6.7 -4.63184 | TTTATAATTCTTTGG TGCTG ATAG CAGCA TTTTTCGCATACGTT CKO_00827 792138 - 791935 - | hypothetical protein CKO_00828 792828 - 792325 - | hypothetical protein CKO_00829 793205 - 792828 - | hypothetical protein TERM 995 793524 - 793501 - R 95 -11 -4.37658 | AATTGCCTGATAAAA GGGCCGAATA ACTA TTTTCGGCCC TGGCGTGCATCATTT CKO_00830 794769 - 793534 - | hypothetical protein TERM 996 793880 - 793892 + g 71 -6.3 -4.35116 | opp_overlap 793880 CGGTTGGCTAACAGA TACTG AGC CAGTA TTTTGCTATAGCCTG TERM 997 794239 - 794226 - G 77 -8.1 -4.18367 | overlap 794208 CATGACACAGATAAA TGGCG TCAT CGCCA TCCTGAACGCCAATA CKO_00831 794902 - 795465 + | hypothetical protein TERM 998 795488 - 795540 + T 81 -12.8 -3.24709 | gap 1, opp_overlap 795496 795505 795518, overlap 795489 795505 CGGTGGCGCTCGTCA CG-GATAAATGGCAGAAAGCCCGCT AAAA AGCGGGCTTTCTGCCAGGGATCGCC TTCGTCAGTATTTTA TERM 999 795489 - 795539 + T 90 -16.3 -2.54103 | gap 1, opp_overlap 795496 795505 795518, overlap 795488 795505 GGTGGCGCTCGTCAC G-GATAAATGGCAGAAAGCCCGCT AAAA AGCGGGCTTTCTGCCAGGGATCGC CTTCGTCAGTATTTT TERM 1000 795531 - 795496 - T 100 -26.4 -3.91897 | opp_overlap 795489 795488 795505, overlap 795505 795518 CTCGTCACGGATAAA TGGCAGAAAGCCCGCT AAAA AGCGGGCTTTCTGCCA GGGATCGCCTTCGTC TERM 1001 795505 - 795522 + T 95 -12.7 -3.86015 | opp_overlap 795496 795505 795518, overlap 795489 795488 GATAAATGGCAGAAA GCCCGCT AAAA AGCGGGC TTTCTGCCAGGGATC TERM 1002 795522 - 795505 - T 95 -12.7 -3.96291 | opp_overlap 795505 795489 795488, overlap 795496 795518 GATAAATGGCAGAAA GCCCGCT AAAA AGCGGGC TTTCTGCCAGGGATC CKO_00832 796530 - 795553 - | hypothetical protein CKO_00833 797207 - 796563 - | hypothetical protein CKO_00834 798255 - 797242 - | hypothetical protein TERM 1003 797690 - 797700 + g 75 -6.8 -4.39426 | CACCACATGAGCGTT CTGC GTG GCAG TTTTATGCGGCTGTC TERM 1004 798229 - 798211 - G 95 -14.6 -3.5764 | AACGGGATGCGCAAA GCTGGCGA AGG TCGCCAGC AATGCGAGGGAGGCC CKO_00835 800342 - 798255 - | hypothetical protein TERM 1005 799273 - 799246 - G 83 -7.6 -4.56597 | TCGCGTTTTGAAAAA TCGACACCCGCA GTCA CGCGGTTGGCGA ATGATGCAATCGGGT TERM 1006 800508 - 800483 - H 95 -7.5 -5.41143 | opp_overlap 800483 CAGGCGTCAAAAAAA CCGGCAATCCT TATC AGGACAACCGG TTCAATTTAACTACT TERM 1007 800987 - 800999 + G 76 -9.1 -3.99405 | overlap 800991 CGTACTGCTAATGGG GGTGC TGA GCACC TTTCTGGTCAGTTGG TERM 1008 802186 - 802202 + G 86 -10.1 -4.27617 | TGTTCTTTGACTGGG CGGTGCG CGC CGCACTG TTTTACTGGCGTATG CKO_00837 800808 - 802298 + | hypothetical protein TERM 1009 802495 - 802468 - T 78 -12.8 -2.66748 | opp_overlap 802473, overlap 802473 GAGGAGCCAAATTTA GAAAAGCCCGCT TTTT AGCGGGCTTTTT GCTTTCCGTCATCGG TERM 1010 802490 - 802473 - T 100 -12.7 -4.51196 | opp_overlap 802473, overlap 802468 GCCAAATTTAGAAAA GCCCGCT TTTT AGCGGGC TTTTTGCTTTCCGTC TERM 1011 802473 - 802490 + T 100 -12.7 -5.00138 | opp_overlap 802468 802473 GCCAAATTTAGAAAA GCCCGCT TTTT AGCGGGC TTTTTGCTTTCCGTC CKO_00839 803102 - 802563 - | hypothetical protein TERM 1012 802949 - 802961 + g 100 -3.3 -5.92399 | TTAGCTGTTTATCAC GCTCA AGT TGCGC TTTTTTATTTTCTTC TERM 1013 802993 - 803012 + g 77 -3.5 -5.06103 | ACAGCCTCTCTTGCT TCACGCG CCTGAA CTCGTGA TTTTTTAGCCGTTCT TERM 1014 803029 - 803041 + g 89 -3.3 -5.58074 | overlap 803023 TTTTTAGCCGTTCTC TGGAC TTT GGCCA TTTTTTTACTGGTTA CKO_00840 803703 - 803230 - | hypothetical protein TERM 1015 803630 - 803641 + g 73 -5.8 -4.51363 | opp_overlap 803630 803629 803621 ATCACATGAAAATAG CGGT TATC ACCG TTTTCATCTTTGATA TERM 1016 804386 - 804365 - g 82 -5.1 -5.09173 | gap 1, opp_overlap 804368, overlap 804368 GAATATTTGAAAAAA GAAGCGG-CG TAT CGACCGCTTA ATTTCATCATCTGTA TERM 1017 804383 - 804368 - g 78 -6.8 -4.63089 | gap 1, opp_overlap 804368, overlap 804365 TATTTGAAAAAAGAA GCGG-CG TAT CGACCGC TTAATTTCATCATCT CKO_00841 803951 - 805735 + | hypothetical protein CKO_00842 806237 - 805911 - | hypothetical protein CKO_00843 806328 - 806654 + | hypothetical protein CKO_00844 806654 - 807433 + | short chain dehydrogenase CKO_00845 808109 - 807630 - | hypothetical protein TERM 1018 807786 - 807769 - G 75 -4.1 -4.86033 | AAACCCGGATAAAAA CTGCTTT CGCC AATGCAG ACTAAATCCCTTCGC TERM 1019 808286 - 808315 + G 80 -8.7 -4.11216 | gap 1, opp_overlap 808293 808294, overlap 808294 AACCCGCCCCTCTAC CCAAAAAGCCCACT TTT AGCGGG-TTTTTGG TTTTCAGCATACAGG TERM 1020 808309 - 808293 - g 71 -4.3 -4.65895 | opp_overlap 808286 808294, overlap 808294 CCCTCTACCCAAAAA GCCCACT TTT AGCGGGT TTTTGGTTTTCAGCA TERM 1021 808294 - 808308 + G 82 -5.6 -5.0925 | opp_overlap 808293 808294, overlap 808286 CCTCTACCCAAAAAG CCCACT TTT AGCGGG TTTTTGGTTTTCAGC CKO_00846 808192 - 808335 + | hypothetical protein CKO_00847 810122 - 808332 - | hypothetical protein TERM 1022 809559 - 809579 + g 70 -6.8 -4.15106 | ATCCGGCAGGGTGAT CGGCAGGT AATCC GCCTGCTG TTTTGCCAGTTCGTC CKO_00848 811580 - 810126 - | AMP nucleosidase TERM 1023 810783 - 810809 + g 95 -8 -5.00616 | opp_overlap 810788, overlap 810785 810786 CTGGCCGTCAGCCGT AATCAGGTGCCA GGC TGGCATCTGGTG TTTTTTCCACGCCAG TERM 1024 810785 - 810807 + g 86 -10.6 -4.13561 | opp_overlap 810788, overlap 810783 810786 GGCCGTCAGCCGTAA TCAGGTGCCA GGC TGGCATCTGG TGTTTTTTCCACGCC TERM 1025 810786 - 810806 + g 76 -11.9 -3.07655 | opp_overlap 810788, overlap 810785 810783 GCCGTCAGCCGTAAT CAGGTGCCA GGC TGGCATCTG GTGTTTTTTCCACGC TERM 1026 811060 - 811042 - G 82 -11 -3.91897 | CGCGCCAGCGAGAAA TCGACACG GCG CGCGTCGA AGTGAGAGAGCGGAT TERM 1027 811694 - 811666 - R 72 -8.8 -3.61715 | gap 1, overlap 811668 811670 GACGTTGCGTAAGAA CAG-ACGGAGGCC AGAT GGCCCCCGTACAG GGATTAGACGTGTGG TERM 1028 811691 - 811668 - R 77 -10.2 -3.38812 | overlap 811666 811670 CGTTGCGTAAGAACA GACGGAGGCC AGAT GGCCCCCGTA CAGGGATTAGACGTG TERM 1029 811689 - 811670 - R 81 -12.8 -3.26444 | overlap 811668 811666 TTGCGTAAGAACAGA CGGAGGCC AGAT GGCCCCCG TACAGGGATTAGACG CKO_00849 813014 - 811698 - | shikimate transporter CKO_00850 813243 - 814076 + | hypothetical protein TERM 1030 815030 - 815017 - g 72 -2.3 -4.95806 | opp_overlap 815018, overlap 815006 815018 AAAGCAGTAGAAAAA CTGGC GCGG GCCAT GTATCAGACGGCTGC CKO_00851 814069 - 815052 + | hypothetical protein CKO_00852 815049 - 816059 + | hypothetical protein TERM 1031 816146 - 816129 - f 100 -9.1 -5.15526 | opp_overlap 816129 816141, overlap 816141 ACAGAAAAGCAAAAA GCCCGCT AAAA AGCGAGC TTTTCTAAATCTGGC TERM 1032 816129 - 816146 + F 77 -6.9 -4.45083 | opp_overlap 816129 816141, overlap 816141 ACAGAAAAGCAAAAA GCCCGCT AAAA AGCGAGC TTTTCTAAATCTGGC CKO_00853 816421 - 816819 + | hypothetical protein CKO_00855 817606 - 817127 - | hypothetical protein TERM 1033 817358 - 817372 + gF 78 -5.7 -4.7268 | CGTCGGCTTACCCGG CTGGA TAAAC TCCAG TTTTATTGCATGTTT CKO_00854 817382 - 817714 + | hypothetical protein CKO_00856 817977 - 817711 - | hypothetical protein TERM 1034 817799 - 817811 + g 78 -6.3 -4.75472 | CGGCGGTTCTCGTCC TCAAG ATC CTTGA TTTTCTTAATATCAG CKO_00857 818857 - 818123 - | hypothetical protein TERM 1035 818669 - 818685 + g 72 -3.7 -4.81734 | opp_overlap 818669 818671 CCATGATTGTAATGA GACATCA GGT TGATATC TTTTTAGTGCTGTTT CKO_00858 819082 - 818858 - | hypothetical protein TERM 1036 819299 - 819311 + rH 71 -3.4 -4.8622 | ATCATGTATGTACTG CATG ACTTA CATG TTTTTGCTTACAGAC TERM 1037 819667 - 819703 + Gr 71 -7.9 -3.90922 | opp_overlap 819675, overlap 819668 CATTTTTTCTCAGCA TGTAGATAGCGCCCACT TCA AGTGGGCGCTGGAAACG TTATTTCGAAAGCAT TERM 1038 819695 - 819675 - gR 100 -16.9 -2.92463 | opp_overlap 819668 819667 CTCAGCATGTAGATA GCGCCCACT TCA AGTGGGCGC TGGAAACGTTATTTC TERM 1039 821341 - 821362 + Gr 82 -10.9 -3.59979 | AGATGCATTAAACGT TGCGCAGAG TGAC CTCTGTGCA TTTCCCGTCGCGCCC TERM 1040 821460 - 821478 + Gr 95 -12.4 -4.1711 | opp_overlap 821456 821460 821457, overlap 821461 GTAAGCCAAAAGGTA TCGCGGTG GCG CACCGCGG TTTATTGCGCCTGAT TERM 1041 821478 - 821460 - gR 72 -10.2 -2.77861 | opp_overlap 821460 821461, overlap 821456 821457 GTAAGCCAAAAGGTA TCGCGGTG GCG CACCGCGG TTTATTGCGCCTGAT TERM 1042 821461 - 821477 + Gr 85 -13.7 -3.09784 | opp_overlap 821456 821460 821457, overlap 821460 TAAGCCAAAAGGTAT CGCGGTG GCG CACCGCG GTTTATTGCGCCTGA TERM 1043 822041 - 822059 + Gr 91 -7.3 -4.88736 | opp_overlap 822041 822040 GGCTATCAGAACAAC CCGGCGC TAAGT GCGACGG TTTTTGTCCCTGATC TERM 1044 822234 - 822198 - gR 76 -9.3 -3.82098 | opp_overlap 822197 822219 GACAACGAATTGAAA CCGGAGAGATCGAGCAG CGC CTGCTGGAGTGCTCCGG CATTATCGAGGCGGT TERM 1045 822418 - 822408 - gR 80 -6.8 -4.64766 | overlap 822409 CGGAGATTGCAAAAA GCCA TAG TGGC AAGGCCGACTTGGCG TERM 1046 823595 - 823578 - gR 75 -4.1 -4.90079 | overlap 823579 ATGGCAATAACAAAA TCGGC TATACCGC GCCGA GTGTGATCGGGCAAT TERM 1047 826798 - 826810 + Gr 72 -10.5 -2.88544 | CGGTATCGCCACGCT GCCGG GAA CCGGC TATCTGGCGCTGGCG TERM 1048 828973 - 828991 + Gr 70 -6.7 -4.07568 | gap 1, opp_overlap 828965 828964 828967 GTACAACCACGCCAC CGTGCGCC AGCT GGCG-ACG TTTTGCCAGCCCCCG CKO_00861 829201 - 829028 - | hypothetical protein CKO_00859 819506 - 829132 + | hypothetical protein TERM 1049 831433 - 831398 - gH 79 -10.5 -3.48276 | opp_overlap 831404, overlap 831399 831401 TCCCTTCGCACACAA CCACTACCCATTGCC TGGACG GGTAATGGGTAGTGT GGAGACCCAACCCGA TERM 1050 831432 - 831399 - gH 83 -14 -2.68823 | opp_overlap 831404, overlap 831398 831401 CCCTTCGCACACAAC CACTACCCATTGCC TGGACG GGTAATGGGTAGTG TGGAGACCCAACCCG TERM 1051 831430 - 831401 - gH 72 -10.8 -2.88822 | opp_overlap 831404, overlap 831399 831398 CTTCGCACACAACCA CTACCCATTGCC TGGACG GGTAATGGGTAG TGTGGAGACCCAACC CKO_00860 829164 - 831773 + | hypothetical protein CKO_00862 831783 - 832652 + | hypothetical protein CKO_00865 832993 - 832793 - | hypothetical protein CKO_00863 832676 - 832930 + | hypothetical protein CKO_00864 832934 - 834064 + | hypothetical protein TERM 1052 834968 - 834936 - g 73 -5.5 -4.57341 | opp_overlap 834937, overlap 834937 AAGTGTGCTGAAAAA CCTGCTGCTGGAGAA TCG CTATCCAGCACCAGT TTACGCATTTGACAA TERM 1053 835137 - 835086 - g 91 -14.4 -3.14344 | gap 1, opp_overlap 835134 CACGCTGCTCACTAA CGCCCTGACAGCCACA-CGCCATCA CCG CGCCGCCGATGTGGCTGCCAGTGCG CAATTGAAAGAATTG CKO_00866 834061 - 835329 + | hypothetical protein TERM 1054 835603 - 835620 + G 81 -8.5 -4.30441 | GCCTGCCGCGCGGCA TGGCAAT GCTG ATTGCCA TTTTCGCTATTGTAA TERM 1055 835706 - 835716 + G 70 -6.8 -4.0942 | opp_overlap 835706 835698 AAATATACTGAGCAA CAGC GGC GCTG TTTGTCTGATCGGTA TERM 1056 837670 - 837692 + G 77 -11.2 -3.54436 | AGCGAGTGTTGGCGG CGGCGCGTGC GCA GCGCGTGTCG TTGTATAACTATCTG TERM 1057 838931 - 838961 + G 70 -9.7 -3.36273 | gap 1 TAGCTTTGTCGGGGA GGTACTGCC-GCTG CTCG CCGCTGGCGGTACC TTAGTATTGGCGCAA CKO_00867 835377 - 840173 + | hypothetical protein TERM 1058 841335 - 841319 - g 77 -4.3 -4.83615 | opp_overlap 841326 841326 CAGGGTTGATAAAAA CCGCGCT GGC AGTGCAG CAGGGAATAATTCCC TERM 1059 841792 - 841815 + G 70 -6.6 -4.17048 | opp_overlap 841798, overlap 841796 GCTCGTGGTGTAGCG CAGACACAGC TCGG GCTGGGGCTG TTGTTTTCCGGGCAG TERM 1060 842924 - 842952 + G 70 -6.6 -4.21275 | gap 1, opp_overlap 842923, overlap 842940 842947 TCATCCCTAGCGAAC CGTCGGTGCGCCG TCAG CCGCGT-CCGGCG TTTTCGGTGCCTTAC CKO_00868 840223 - 843255 + | hypothetical protein TERM 1061 845059 - 845091 + GF 71 -7.8 -3.91597 | gap 1, overlap 845058 TATTCATCAGCCTGC CGCGCGT-TTGCA ACGCCTTA TGCAACGCGCGCG TTTGGTCTGTCTGGT TERM 1062 847661 - 847674 + GF 70 -5.2 -4.41353 | ACTGCGCAAGACCCT CGGG ACACAA CCCG TTTTACTCTGTGTCC TERM 1063 847724 - 847744 + GF 91 -14.1 -3.06133 | overlap 847710 ACACCGCAGGTGTGG CTCGATCAC CAG GTGATCGAG TTGGCTGGGGAGTTG TERM 1064 848140 - 848120 - gf 72 -4.7 -4.65895 | gap 1, opp_overlap 848134 848138, overlap 848121 848122 848133 GTGGTGATGGAAAAA GGCTGGCA GCAGAT TGCC-GCC GTACACGGCATTTTA CKO_00869 843299 - 849799 + | hypothetical protein TERM 1065 849906 - 849892 - gf 82 -11.4 -3.59979 | TTGCGGCATTCGAAA CGGTGC TTC GCACCG GATGCAACATTTTGG TERM 1066 851180 - 851168 - gf 72 -6.2 -4.28375 | GGAACAGATGCAAAA CGCC CTGCT GGCG AAACTGGCCGCACAT TERM 1067 851409 - 851452 + GF 74 -7.5 -4.13767 | gap 1, opp_overlap 851442 AGTGACTGGCTGGCG TGCTCTGAGGTGTTGTCACA GGCGG TGGGACAACTGCTC-GAGCA TTTTCCGCTCGAACC TERM 1068 853793 - 853773 - gf 72 -4.7 -4.65895 | gap 1, opp_overlap 853787 853791, overlap 853774 853775 853786 GTGGTGATGGAAAAA GGCTGGCA GCAGAT TGCC-GCC GTACACGGCATTTTA CKO_00870 849741 - 856274 + | hypothetical protein TERM 1069 857460 - 857503 + G 88 -13.8 -3.4252 | overlap 857449 857448 ACCTGTCAGCCCGGT GCTGGCGTTTGCGCACATGC AGCA GCCGGTGCGTAAGCGCAAGC TTATCGTCAATGGCG CKO_00871 856267 - 857730 + | hypothetical protein CKO_00872 857792 - 859231 + | hypothetical protein CKO_00873 859228 - 863595 + | hypothetical protein TERM 1070 864916 - 864945 + G 80 -4.2 -5.06414 | overlap 864919 TGCGAGACGCCTGCG CAAGCGGTGC AAGAAAATGA GCGCCGCCTG TTTTTCTTCAGCGCC TERM 1071 865700 - 865729 + G 73 -5.7 -4.41348 | overlap 865691 865702 ACATCCTGCCGCTGT TGGGCACTCTTTG GCAA CGAGGAGTGACTA TTTGTTTACCGGAAA CKO_00874 863626 - 866085 + | hypothetical protein CKO_00875 866152 - 867612 + | hypothetical protein CKO_00876 867758 - 868327 + | hypothetical protein TERM 1072 868597 - 868578 - g 71 -5.8 -4.29325 | opp_overlap 868591 GACCAAGAGGCAAAA GGAAAAAC TATT ATTTTTCC TGAGGAAGGATTTAA CKO_00877 868362 - 868874 + | hypothetical protein TERM 1073 869023 - 869040 + F 70 -9.9 -3.01924 | opp_overlap 869022 869023 869025, overlap 869025 TCTACTTAACATAAG CACATGC GAAC GCATGTG TATTAAGAACCAATC CKO_00878 869101 - 869256 + | hypothetical protein CKO_00879 870908 - 870144 - | hypothetical protein CKO_00880 872671 - 870917 - | hypothetical protein TERM 1074 872495 - 872507 + g 83 -7.7 -4.53602 | opp_overlap 872495 CACCGATTTTAACCA GAACG GAG CGTTC TTTCTTTCCTCTCGG TERM 1075 872746 - 872700 - R 100 -28.4 -2.52676 | GATGGGGTCAAGTCA TGGAGTCATCGCATGGAGTC GCAGCTT GACTCCATGCGATGACTCCA TCAAATGACTCCATA CKO_00881 873001 - 872747 - | hypothetical protein TERM 1076 872800 - 872773 - G 95 -7 -5.32599 | gap 1, overlap 872777 872778 CATAAAACAGAAAAA GACAGTGATCGCC AGT GGCGATCAA-GCC CGTTATCCCTGCTTT TERM 1077 872797 - 872777 - G 74 -9.7 -3.68047 | overlap 872773 872778 AAACAGAAAAAGACA GTGATCGCC AGT GGCGATCAA GCCCGTTATCCCTGC TERM 1078 872796 - 872778 - G 79 -13.2 -2.78388 | overlap 872777 872773 AACAGAAAAAGACAG TGATCGCC AGT GGCGATCA AGCCCGTTATCCCTG TERM 1079 872843 - 872823 - G 91 -11.1 -4.36914 | opp_overlap 872823 872827 CCTGCTTTCAGAAAA CAGCCGACC AGT GGTCGTCTG TCCTCTGAAACGCCC TERM 1080 873181 - 873162 - RH 71 -3.4 -4.83169 | opp_overlap 873164, overlap 873163 873164 AGCCCCCCACAAAAA CCGGCACG TGGG CGTGCCTT TTTGCTCGCTGGGGC TERM 1081 873164 - 873179 + rH 100 -10.4 -4.7497 | opp_overlap 873163 873162 873164 CCCCCCACAAAAACC GGCACG TGGG CGTGCC TTTTTGCTCGCTGGG TERM 1082 873179 - 873164 - RH 71 -10.4 -2.6933 | opp_overlap 873164, overlap 873163 873162 CCCCCCACAAAAACC GGCACG TGGG CGTGCC TTTTTGCTCGCTGGG TERM 1083 873181 - 873203 + rH 80 -7.1 -4.59773 | gap 1 CACGTGGGCGTGCCT TTTTGCTCGC TGGG GCG-GCAAAA TTTTTGCGGCTCCCC TERM 1084 873406 - 873416 + Gr 91 -4 -5.62045 | TGTTAGCCTGTGTGT TGTA CAA TACA TTTTTTGTTCTGTGT CKO_00883 873739 - 873434 - | hypothetical protein CKO_00882 873294 - 873581 + | hypothetical protein TERM 1085 873628 - 873646 + gT 81 -8.1 -4.25658 | opp_overlap 873628 ATATTTCGTAATACA GCCCGCA ACCTC TGTGGGC TTCTTTTGATAACGT CKO_00884 874150 - 873782 - | hypothetical protein CKO_00885 874515 - 874117 - | hypothetical protein TERM 1086 874201 - 874213 + gr 77 -9.1 -3.92522 | GCCTTTTGCGCCATT CTGGC GAA GCCAG TTTCTGGCATTAAAG TERM 1087 874271 - 874302 + gr 77 -10.2 -3.34902 | gap 1, overlap 874269 ACAATTCGTGTTGAG TGGGCGGCAGC-GTA AAA TACTGCTGGCGTCCA TGTTGTGTCGTGGAA CKO_00886 875537 - 874512 - | hypothetical protein TERM 1088 875415 - 875393 - G 71 -9.8 -3.53745 | opp_overlap 875389 875393, overlap 875389 CATAGCTCAAAGGAA CGGCATGCTG TTC CCACATGCCG TTGATTTTGGTATAC CKO_00888 875847 - 875527 - | hypothetical protein CKO_00887 875696 - 875869 + | hypothetical protein CKO_00889 877103 - 875859 - | hypothetical protein TERM 1089 876027 - 876041 + g 76 -3.4 -5.00884 | overlap 876029 GCTGTTTTCCGTATA GTCCGT ATT GCGGTC TTTTTTACCCGCACT TERM 1090 876469 - 876510 + g 76 -12.9 -2.70946 | gap 1, overlap 876468 876465 876494 876496 876496 876498 876500 GGGTTATAGGGTATG CGGCGCACTGGTGC-GGGGC TTT GTCCCGGCGGCGGTGCGGCG GTATTTGTGGCCGCG TERM 1091 876765 - 876775 + g 74 -4.6 -4.75472 | opp_overlap 876748 GAGATCGTTACGCTG CCGG TAA TCGG TTTTGTTCGTCTGCG TERM 1092 876789 - 876803 + g 80 -5.6 -4.88795 | overlap 876786 GGTTTTGTTCGTCTG CGGGGC TGT GTCCTG TTTCTTTTCTTCCGT TERM 1093 877059 - 877084 + g 91 -6.8 -5.14626 | overlap 877045 AGCGTGTGCCGGGAA TGCCTGCGCT TCATCC GGCACAGGCA TTTTGTTTTCGTCGT TERM 1094 877144 - 877127 - R 73 -4.3 -4.82901 | opp_overlap 877116 877118 877117 TTCCTTTTATAAAAA TATAAAA ATAT TTTTATA GGTTAATTGGATTCC CKO_00890 878055 - 877147 - | hypothetical protein CKO_00891 878735 - 878052 - | hypothetical protein CKO_00892 878880 - 878728 - | hypothetical protein CKO_00893 880030 - 878957 - | hypothetical protein CKO_00894 880276 - 880034 - | hypothetical protein CKO_00895 880991 - 880284 - | hypothetical protein CKO_00896 883747 - 881009 - | hypothetical protein TERM 1095 881215 - 881233 + g 74 -10.3 -3.54424 | CCACAACATACTGGC GGGCTTG CGGGT CAAGCCC TTTCACCACGTCGAA TERM 1096 882977 - 882935 - G 71 -9.8 -3.53012 | gap 1, opp_overlap 882947 882948, overlap 882917 GTTTCCTTCGGTAAA CG-TACCGAGAGGTCGCGC ACCATA GCGCGACAGCGCGGTATCG AGCGTGCTTTTTATT TERM 1097 882947 - 882984 + g 90 -6.1 -5.27335 | opp_overlap 882917 882935, overlap 882948 AAACGTACCGAGAGG TCGCGCACCATAGCGCG ACAG CGCGGTATCGAGCGTGC TTTTTATTTCCAGCA TERM 1098 882948 - 882983 + g 74 -9.6 -3.75678 | opp_overlap 882917 882935, overlap 882947 AACGTACCGAGAGGT CGCGCACCATAGCGCG ACAG CGCGGTATCGAGCGTG CTTTTTATTTCCAGC TERM 1099 883561 - 883577 + g 83 -10.9 -3.96148 | opp_overlap 883560 ATACGGCAATCAGAT TGAACCG CAT CGGTTCA TTTCTGGTAAGGGAC TERM 1100 883709 - 883720 + g 71 -7.2 -3.95986 | overlap 883708 TGGCACCCCCCACAG CGCC GCCG GGCG TTTCATTGCCTTGAG CKO_00897 884053 - 883760 - | hypothetical protein CKO_00898 884763 - 884053 - | hypothetical protein TERM 1101 884717 - 884669 - G 70 -6.6 -4.1585 | gap 1 GCATAAGGGTTAAAA CCGGATTCCACCCGTGCCACGTC GAAT GCCGTGG-ACGGATGAATGCTGG CGGCGCACTGCATGG CKO_00899 885069 - 884836 - | hypothetical protein TERM 1102 884958 - 885001 + g 100 -10.5 -4.84359 | TATTCAGACCGGATT TACCGTGGTGGGGAAAGG-CG ACTC CGACCTTTGTCCACCA-GGTA TTTTTCTCACCCTGA CKO_00900 885330 - 885470 + | hypothetical protein CKO_00901 885766 - 885638 - | hypothetical protein TERM 1103 885739 - 885755 + g 74 -4.4 -4.70169 | CATAAAGCATTTCAA GCTCAT TCCCT GTGAGC TTTTCTTCCATATGC TERM 1104 886001 - 885976 - R 90 -10.5 -4.34402 | TGGTGCATATTAAAA TGTGCGGAG CTATTCTC CTCCGCACA TACAGATTTAACGTC CKO_00902 886789 - 886208 - | hypothetical protein CKO_00903 887163 - 886978 - | hypothetical protein TERM 1105 887241 - 887274 + r 100 -15.5 -3.31322 | opp_overlap 887232 887248 887262, overlap 887248 887251 GAGAAAGCTGGTGAG CCCTAAATAAGGGAT GCAA AACCCTTATTTAGGG TTGTCGGCCATTACA CKO_00904 888229 - 887303 - | hypothetical protein TERM 1106 887522 - 887535 + g 91 -3.8 -5.72616 | opp_overlap 887522 ACGGGAAGGTGAAAT GGGA TGACTC TCCC TTTTTTTGTATAAAT TERM 1107 888200 - 888217 + g 89 -2.7 -5.44721 | TGACATATAATGAGT TATAAGC AATG GCTGATA TTTTTTTGACATAAT TERM 1108 889069 - 889089 + r 89 -11.2 -4.15565 | opp_overlap 889069 ACTAGTGGTGTAAAA GGGATACC TTTTC GGTATCCC TTTTACAATAATCAG TERM 1109 889089 - 889069 - R 89 -11.2 -4.08945 | opp_overlap 889069 ACTAGTGGTGTAAAA GGGATACC TTTTC GGTATCCC TTTTACAATAATCAG CKO_00905 891122 - 889101 - | hypothetical protein TERM 1110 890921 - 890940 + g 75 -12.8 -2.60244 | overlap 890917 CTCTGGGGAGTTTGT CGCTGGCG GTGA CGCCGGCG TCGCTTAATTCCGGC TERM 1111 891206 - 891245 + r 86 -11.5 -3.72051 | overlap 891207 891210 891210 ATTTCTAATAGTGGT GCTACCCGAAACGGGTT TATTTC AACCTGTTTCGGGTCGG TTTGCGCTTATTGGA TERM 1112 891207 - 891244 + r 93 -15 -2.82749 | overlap 891206 891210 891210 TTTCTAATAGTGGTG CTACCCGAAACGGGTT TATTTC AACCTGTTTCGGGTCG GTTTGCGCTTATTGG TERM 1113 891210 - 891241 + r 90 -15.3 -2.66593 | overlap 891207 891206 891210 CTAATAGTGGTGCTA CCCGAAACGGGTT TATTTC AACCTGTTTCGGG TCGGTTTGCGCTTAT TERM 1114 891210 - 891220 + r 81 -8.2 -4.43208 | overlap 891210 891207 891206 CTAATAGTGGTGCTA CCCG AAA CGGG TTTATTTCAACCTGT TERM 1115 891275 - 891300 + r 91 -6.7 -5.46276 | opp_overlap 891275, overlap 891277 ACAGAATGGCGATAA CGGTCGACGGC GAGA GCCGTCAGGCG TTTTTTGTCTATCTT TERM 1116 891277 - 891299 + r 71 -7.7 -3.85325 | gap 1, opp_overlap 891275, overlap 891275 AGAATGGCGATAACG GTC-GACGGC GAGA GCCGTCAGGC GTTTTTTGTCTATCT CKO_00906 892830 - 891253 - | hypothetical protein TERM 1117 891895 - 891885 - G 74 -6.8 -4.2349 | overlap 891862 CCGCCATACCGAAAA CCTG TTG CAGG GTACAGTCAAAGGTG CKO_00907 893622 - 892834 - | hypothetical protein CKO_00908 894734 - 893634 - | hypothetical protein TERM 1118 894236 - 894226 - G 70 -5.4 -4.48713 | GCCAGCAACAACAAA TCCA GCG TGGA GTAGAGCAACTGTCG TERM 1119 894486 - 894443 - G 89 -13.9 -3.61715 | gap 1, opp_overlap 894443 GATGCTCCTGAATAA CGTGTACGCCGCGCGCCAGA AAGTG TCTGGCAAGCTGCGTAC-CG GTTCCTCCGGCGACG CKO_00909 904222 - 894731 - | hypothetical protein TERM 1120 895014 - 895034 + g 74 -7.5 -4.07885 | overlap 895015 TTATCGAGCCACGTT TCTGCCGCT TGC AGCGTCAGG TTTTGCGACACCATA TERM 1121 895124 - 895134 + g 74 -8.2 -4.0616 | GAAATGTTCGGGCAG CGCC AGA GGCG TTTGTCCTTCGGCTA TERM 1122 898824 - 898834 + g 72 -2.4 -4.9725 | overlap 898825 GCAGGAGGAATGACC GGCG TTG CGGC TTTTTCTGTGGCGCT TERM 1123 899452 - 899482 + g 74 -3.2 -4.96848 | gap 1, overlap 899454 899464 ATGACTCATCCACGC GCGGCGCCA-GCA GGGCGA TGCGTCGCGCCCC TTTTTCTCTGAGCCA TERM 1124 901801 - 901789 - G 77 -4.7 -4.84359 | CCATCTCCAGAAAAA CGCGG GCG CCGAG CTGATGCGCCACCTG TERM 1125 902626 - 902652 + g 89 -13.6 -3.64682 | CCCCCGATTTCTCAC CGGCCCAGGCGC TGA GCGCCTCGGCGG TTTCACGGTTTAATG TERM 1126 902782 - 902823 + g 91 -7.9 -4.84761 | gap 1, opp_overlap 902767 902766, overlap 902785 902786 CCGTCGCCAGCCGCC GCAACGCGCTGTCGCT-GGC GGC GCTGAGCAGCAGCGCGGTAC TTTTTCTGCCGCTAT TERM 1127 902786 - 902819 + g 72 -11.7 -2.58667 | gap 1, opp_overlap 902767 902766, overlap 902785 902782 CGCCAGCCGCCGCAA CGCGCTGTCGCT-GGC GGC GCTGAGCAGCAGCGCG GTACTTTTTCTGCCG TERM 1128 903298 - 903338 + g 79 -12.5 -2.93073 | overlap 903306 903310 TGACTGCCTGTTGCC CTGCGACGGAAGGGGCGGT ATA GCCGACCTTTCTGTTGCCG TCGTTGTTGACCGCG TERM 1129 904287 - 904257 - R 77 -10.5 -3.33711 | gap 1, overlap 904252 GATTCACAAAGTCAA TGGAACGCCAT-GC GTTC GCGATGGCGTTCCG GGGAAAATCAGTTTG CKO_00910 904987 - 904310 - | hypothetical protein TERM 1130 904610 - 904652 + gr 77 -10.5 -3.34398 | gap 1, overlap 904608 GTGTGGCTGAGATTG CTCAGGGCATACGCGCGGTG AGCG CTCTGCGCAT-TGCCCTGCG TGTTTAACGGGAGGC TERM 1131 904681 - 904698 + gr 72 -8.3 -3.78775 | GCACCAGCGCGGCGA GCGGCAG TTGC CAGCCGC TTTCATCCTCGGCCA CKO_00911 910421 - 904911 - | hypothetical protein TERM 1132 905243 - 905210 - GR 75 -9.5 -3.60525 | overlap 905231 905234 TCCATGCAGAGAGAA CCGTTGACCACACCG ACAA CAGTACGGCCGACGG GGTGAGATGGGCGTC TERM 1133 905251 - 905267 + gr 91 -7.2 -5.0133 | opp_overlap 905234 905231, overlap 905252 GCCGACGGGGTGAGA TGGGCG TCAGC CGCCCG TTTTTTCAGCCGATG TERM 1134 906160 - 906188 + gr 78 -6 -4.70659 | gap 1, opp_overlap 906162 906164, overlap 906163 906164 ACATTGCCAGTTGAT AAGAGTTGCTGCC AGAG GGCGGCAAC-CTG TTTTTCAATGTCGCC TERM 1135 906163 - 906186 + gr 77 -8.8 -3.96999 | opp_overlap 906162 906164, overlap 906160 906164 TTGCCAGTTGATAAG AGTTGCTGCC AGAG GGCGGCAACC TGTTTTTCAATGTCG TERM 1136 906185 - 906164 - GR 71 -10.1 -3.23393 | opp_overlap 906163 906160 906164, overlap 906162 TGCCAGTTGATAAGA GTTGCTGCC AGAG GGCGGCAAC CTGTTTTTCAATGTC TERM 1137 906164 - 906185 + gr 80 -12.3 -2.97476 | opp_overlap 906164 906162, overlap 906163 906160 TGCCAGTTGATAAGA GTTGCTGCC AGAG GGCGGCAAC CTGTTTTTCAATGTC TERM 1138 907718 - 907736 + gr 74 -10.2 -3.14132 | CACCCGGCACCCAGT CAGGGCAG TCC CGGCCCTG TTCATCCACCACCCG TERM 1139 908506 - 908486 - GR 72 -8.2 -3.6682 | overlap 908498 GCTGATCCAGCGAAA CCGGAACG TAAAC CGCCCCGG CCAGCAGGACGGCCA TERM 1140 908518 - 908498 - GR 72 -8.2 -3.77241 | overlap 908486 AAACCGGAACGTAAA CCGCCCCG GCCAG CAGGACGG CCAGAACCGCAACAA TERM 1141 908603 - 908622 + gr 71 -10.7 -2.69799 | opp_overlap 908601, overlap 908601 CGCACTCGATTAACC TGCCCGC GCAACG GCGGGCA TAGTCTGTCAGCTCA TERM 1142 909274 - 909239 - GR 71 -10.5 -2.72379 | gap 2 TGAAGTCGGCAAGCA TCG--CGCCAACCGCCG GGTG CAGCGGCTGGCGGTCGA ATAAGGTGATGTTAA TERM 1143 909347 - 909337 - GR 72 -2.4 -4.86001 | AGCACGGCAGAAAAA CAGG TCG CCAG CGCCATTGTCGGCGT TERM 1144 910497 - 910507 + r 84 -8.2 -4.55697 | overlap 910497 AACAATTGGATGCTA CCCG AAA CGGG TTTATTTATGCCCCT TERM 1145 910579 - 910549 - R 100 -21.3 -3.93658 | opp_overlap 910553 AACAGGCGGAAAGAA CAGAGGCCCGGAT GGGGT ATCCGGGCCTCTG TCAGGGAGGAGTTTA TERM 1146 910553 - 910575 + r 93 -15.6 -2.87132 | opp_overlap 910549 GGCGGAAAGAACAGA GGCCCGGATG GGG TATCCGGGCC TCTGTCAGGGAGGAG CKO_00912 911571 - 910612 - | hypothetical protein TERM 1147 911863 - 911873 + G 77 -4.6 -4.85599 | GGCATTAACCAGCCT GGGG GCG CTCC TTTTTCTGGCGTGGA CKO_00913 911828 - 913540 + | hypothetical protein TERM 1148 913602 - 913637 + G 84 -13.4 -3.14881 | gap 1 TCCAGCGTTGGCAGT CAG-GCCAGGATGCTGC GAC GCAGTATGCTGGCGCTG TTGCTGGCGGCATTC TERM 1149 914145 - 914113 - g 71 -8.5 -3.86346 | gap 1, overlap 914114 914117 CGATGCGGCGACAAA TGCAGACGCTGGGG GAAGCG CACCAGCGTCTG-A GCGGCGATATCGTTG CKO_00914 913527 - 915329 + | hypothetical protein CKO_00915 915322 - 916602 + | hypothetical protein CKO_00916 916630 - 917934 + | salicylate synthase Irp9 TERM 1150 918092 - 918074 - T 82 -11 -3.60814 | opp_overlap 918074 918071 AAAGTCTATATAGAA CCACCTCC TGT AGAGGTGG TGGTAATTTGCCAGA CKO_00917 919390 - 918128 - | hypothetical protein TERM 1151 918543 - 918555 + g 73 -5.5 -4.56597 | opp_overlap 918543, overlap 918538 GAGAGGGGGACGATA TGCGG CAT TCGCA TTTTTGCCCCGCGGC CKO_00918 919872 - 919780 - | hypothetical protein CKO_00920 920003 - 919791 - | hypothetical protein TERM 1152 919945 - 919964 + Gg 83 -8.6 -4.45399 | overlap 919930 GCGGTACTGTCTGCC TCAGTAGC CAGT GCTGCTGA TTTTCCTGTTACTAT CKO_00919 919903 - 920859 + | hypothetical protein CKO_00921 920970 - 921878 + | hypothetical protein CKO_00922 922587 - 922084 - | hypothetical protein CKO_00923 922699 - 922938 + | hypothetical protein CKO_00924 923020 - 923118 + | hypothetical protein CKO_00925 923155 - 924378 + | hypothetical protein TERM 1153 924416 - 924376 - T 75 -9.7 -3.61398 | opp_overlap 924385, overlap 924380 924381 CCCTGGTTCGAAGAA TGAATCGAAGGCACCCG CATTTGT CGGGTGCCTTCGTATGA AAGCGAAAAGGGGGC TERM 1154 924412 - 924380 - T 95 -14.9 -3.53444 | opp_overlap 924385, overlap 924376 924381 GGTTCGAAGAATGAA TCGAAGGCACCCG CATTTGT CGGGTGCCTTCGT ATGAAAGCGAAAAGG TERM 1155 924411 - 924381 - T 100 -18.4 -2.71745 | opp_overlap 924385, overlap 924380 924376 GTTCGAAGAATGAAT CGAAGGCACCCG CATTTGT CGGGTGCCTTCG TATGAAAGCGAAAAG TERM 1156 924385 - 924407 + T 79 -12 -3.25823 | opp_overlap 924381 924380 924376 GAAGAATGAATCGAA GGCACCCG CATTTGT CGGGTGCC TTCGTATGAAAGCGA CKO_00926 924642 - 924436 - | hypothetical protein CKO_00927 926294 - 924645 - | hypothetical protein TERM 1157 924913 - 924899 - G 76 -2.8 -5.1101 | opp_overlap 924899 TTAGCAGTGAAAAAA TGATCC CGG GCATCA GTTCTGCTGGCAGTT CKO_00928 927436 - 926306 - | hypothetical protein CKO_00929 928889 - 927507 - | hypothetical protein TERM 1158 927659 - 927681 + g 71 -4.9 -4.56597 | gap 1 CAATAAGTTGCAGTT CTGCAG-GAT GAAG ATCACTGCGG TTTTTCAAAAAGGCA CKO_00930 929423 - 928971 - | hypothetical protein TERM 1159 929355 - 929383 + g 74 -8.1 -3.92178 | overlap 929348 AGCAAGGGTGGATGG CGTTGCCCGCAAA CCA TGTGTGCGCAACG TTTGCTTCCAGTCAT TERM 1160 929774 - 929750 - g 95 -14.3 -3.45023 | GTATCAGCAGCAGAA GCGGGATCCAG AAG CTGGATTCCGC GCTGAAAAACCTGCT TERM 1161 930280 - 930306 + G 76 -10.2 -3.72576 | AAATACGATATTTCG TGGAGGGTCATT GAG GATGACCGTCCA TTTCATCCGCAGCGG CKO_00931 929521 - 930720 + | hypothetical protein TERM 1162 930844 - 930825 - g 95 -5.7 -5.37345 | overlap 930827 CTGAACGAGAAAAAA TCCTGGC GATGCT GCCAGAA GATTACATGAATCCT CKO_00932 930791 - 931213 + | hypothetical protein CKO_00933 931313 - 932212 + | putative GTP cyclohydrolase CKO_00934 932235 - 932762 + | hypothetical protein TERM 1163 932838 - 932865 + G 77 -4.9 -4.98103 | overlap 932856 AGCAAAATGATACTT GCCTCTTCT TTCCTTTTGC GGAAGAGGC TTTTCTGTTTTATTA CKO_00935 932829 - 933758 + | hypothetical protein CKO_00936 934584 - 933775 - | hypothetical protein TERM 1164 933827 - 933807 - G 70 -6.9 -4.07568 | TTTTGTCTCGTAAAA CTACAATAC CCG GTTTTGTAG CCATGTATCTAATAA CKO_00937 935427 - 934600 - | hypothetical protein CKO_00938 936281 - 935421 - | hypothetical protein TERM 1165 935886 - 935905 + g 70 -10 -3.35046 | opp_overlap 935882 935884, overlap 935884 AAGCTGAAGAATATC TTCTGGCG GAAC CGCCAGGA TATTTCCCAGAATGA TERM 1166 936274 - 936262 - G 70 -5.5 -4.50058 | opp_overlap 936272, overlap 936272 TATTGATAACCAAAA GGCTC CAG AAGCC AGCTCATGATGACCT CKO_00939 937099 - 936278 - | hypothetical protein CKO_00940 938017 - 937103 - | hypothetical protein TERM 1167 938997 - 938984 - g 81 -3.8 -5.14563 | opp_overlap 938972 TGGGCCAGCAAAAAA CAGC TTGATG GCTG GCTTGAGAAAACGGC TERM 1168 939648 - 939622 - g 70 -6.5 -4.10657 | overlap 939623 GGATAGGCTGGAAAA CGCGCTCTCAG CCTCT CTGGAAGCGCA GGGATTACAATGGTC TERM 1169 939844 - 939821 - g 86 -9.5 -4.3739 | opp_overlap 939820 939824 GATGGCTCGACAAAA CGCCCGGTG ATGTTG CACAGGGCG CTCTTCGGCTCCCTT CKO_00941 938270 - 940228 + | hypothetical protein CKO_00942 940281 - 941072 + | hypothetical protein CKO_00943 941069 - 942415 + | dihydroorotase TERM 1170 942629 - 942619 - f 71 -6.8 -4.11692 | TATTGAGGGGCAAAA CCTG CGA CAGG AAGTGCCGTCGATGC TERM 1171 943421 - 943389 - g 85 -2 -5.5112 | gap 1, overlap 943390 943391 TGGACGAAGAAAAAA CGGTGCTTGAATCAC TTAT GTGCTTCAAACGC-G CCGGGGCGGATGGAA CKO_00944 942641 - 943498 + | delta-aminolevulinic acid dehydratase CKO_00945 943651 - 943986 + | hypothetical protein TERM 1172 944341 - 944328 - g 72 -3.8 -4.8048 | overlap 944337 GCGCCAGAGCAAAAA CGGT TACAAG ACCG GGTCAGCCGTCTTTT CKO_00946 944028 - 945212 + | hypothetical protein TERM 1173 945312 - 945292 - f 100 -11.1 -5.1356 | CGGCATTAACAAAAA GCCTGTCCA ACA TGGGCAGGC CTGAAGCGTTTAAGC CKO_00947 945576 - 945830 + | hypothetical protein TERM 1174 946023 - 945999 - T 100 -15.9 -4.03204 | opp_overlap 945991 946002 946004 TATTAAAGCCAGAAA GTAGATCTGCT ATC AGCAGATCTAC TATGAAAGGCGTTGT TERM 1175 946002 - 946020 + T 76 -11.8 -2.62263 | opp_overlap 945999, overlap 945991 946004 TAAAGCCAGAAAGTA GATCTGCT ATC AGCAGATC TACTATGAAAGGCGT CKO_00948 947319 - 946054 - | hypothetical protein CKO_00949 948248 - 947343 - | hypothetical protein TERM 1176 947948 - 947963 + g 76 -3.2 -5.011 | CGCCTGCCGGGTCCT GGAGAA TATT TGCTCC TTTTGTTGTTTCAAT CKO_00950 949053 - 948325 - | hypothetical protein TERM 1177 948878 - 948888 + g 73 -5.4 -4.66953 | TAAAAAGCAGCCATT GAAG CGT CTTC TTTTTGCACTGTTAA TERM 1178 949086 - 949074 - R 82 -2.6 -5.47399 | GTAATGTTAAAAAAA CGCC AACCG GGCA AGCGCTTAAACAAAG TERM 1179 949129 - 949119 - R 76 -8.2 -4.11938 | GAAATGAACCATAAA GCGC CCG GCGC ATAAAACCGAAGCCG TERM 1180 949189 - 949161 - R 70 -9 -3.33009 | opp_overlap 949165 CAAAAGGTGCTAGAA CCCATTCATGAA GCCAG TTCATGAATGTG TAGCCTCATGTTGCC CKO_00951 949925 - 949179 - | hypothetical protein TERM 1181 950188 - 950169 - R 100 -13.6 -5.24129 | overlap 950181 950182 TGTTGCCATAAAAAA TGGTGCCC AAAA GGGCACCA GATGCATCAGGTACC CKO_00952 952168 - 950195 - | hypothetical protein TERM 1182 951395 - 951405 + g 77 -8.2 -4.19238 | ACAGGTCAGGTACGT CCCC CAC GGGG TTTTACCATTGGCGC TERM 1183 951971 - 951989 + g 93 -11 -4.47551 | overlap 951972 TAATGCTGAGGGATT TGCCTTCG CCG CGAAGGCG TTTTCTGGCTTGACT TERM 1184 951972 - 951988 + g 78 -12.3 -3.27808 | overlap 951971 AATGCTGAGGGATTT GCCTTCG CCG CGAAGGC GTTTTCTGGCTTGAC TERM 1185 952237 - 952227 - R 89 -4 -5.79526 | opp_overlap 952227, overlap 952229 ACAGTTTAAAAAAAA TTTG TTA CAAA TTTATAACATGAGAA TERM 1186 952335 - 952310 - R 100 -14.7 -4.57482 | opp_overlap 952310 TTACTGATAAATAAA GCCGTCCCCAC CTAA GCGGAGACGGC TTCGTTATACTAACA TERM 1187 952310 - 952335 + r 77 -10.3 -3.47322 | opp_overlap 952310 TTACTGATAAATAAA GCCGTCCCCAC CTAA GCGGAGACGGC TTCGTTATACTAACA CKO_00953 953609 - 952353 - | hypothetical protein TERM 1188 952762 - 952774 + g 73 -5.5 -4.56597 | opp_overlap 952762, overlap 952757 GAGAGGGGGACGATA TGCGG CAT TCGCA TTTTTGCCCCGCGGC CKO_00955 954174 - 955091 + | nitrogen assimilation transcriptional regulator CKO_00956 955115 - 956143 + | transcriptional regulator Cbl TERM 1189 956152 - 956169 + T 95 -12.7 -4.05026 | opp_overlap 956152 GATATAAAGCAAAAA GCCCGCT AAAA AGCGGGC TTCTTTAAATTTGGC TERM 1190 956169 - 956152 - T 100 -12.7 -5.07011 | opp_overlap 956152 GATATAAAGCAAAAA GCCCGCT AAAA AGCGGGC TTCTTTAAATTTGGC CKO_00958 957154 - 956357 - | hypothetical protein TERM 1191 956961 - 956944 - G 95 -5.5 -5.36441 | gap 1, opp_overlap 956944, overlap 956947 CCGGGAGACAAAAAA GCAGCGCA ATA CGCGC-GC TTTTCAACGCATCCA TERM 1192 957033 - 957021 - G 80 -4.8 -5.00616 | opp_overlap 957027 TTTTGCTGTAAAAAA CGCT CGGCC AGCG CAATTAATCTGGCTT CKO_00960 957717 - 957577 - | hypothetical protein CKO_00961 957941 - 958555 + | hypothetical protein TERM 1193 958593 - 958575 - f 100 -11.6 -4.60797 | GGCTGAGAGATAAAA CCGCCTCG CGC CGGGGCGG TATAAAACGATAATA TERM 1194 958608 - 958630 + F 95 -7.6 -5.4505 | opp_overlap 958611, overlap 958611 GTATAAAACGATAAT AAAGCGGCCG CTG CTGCCGCTTA TTTTTTATTCAGAGG TERM 1195 958611 - 958627 + F 93 -9.3 -4.81306 | opp_overlap 958611, overlap 958608 TAAAACGATAATAAA GCGGCCG CTG CTGCCGC TTATTTTTTATTCAG TERM 1196 958627 - 958611 - f 86 -9.3 -4.4522 | opp_overlap 958611 958608 TAAAACGATAATAAA GCGGCCG CTG CTGCCGC TTATTTTTTATTCAG CKO_00962 958651 - 959352 + | hypothetical protein TERM 1197 959769 - 959759 - g 76 -5.4 -4.78572 | GCGTAACGAAGAAAA TGTC AGC GACA ACCTGATTCAGTCCT TERM 1198 960807 - 960776 - g 75 -11.6 -3.43288 | gap 1 CAAAGGCTACTACAA CCTGAACGAC-GCGC TGT ACGCCGTCGATCAGG AAAAGAACCACAACA TERM 1199 961047 - 961059 + G 70 -9.1 -3.67588 | AGCTCCGGTCATCGT CGCGA CGA TCGCG TTTCGCTCAACTTTA CKO_00963 959364 - 961850 + | hypothetical protein CKO_00964 961841 - 962836 + | hypothetical protein CKO_00965 962851 - 963501 + | hypothetical protein TERM 1200 963529 - 963546 + T 100 -11.3 -5.63857 | GAAGGTTGATTTTGA TGCCGGA ATCT TCCGGCA TTTTTTTCCCTTTTT CKO_00966 964277 - 963561 - | hypothetical protein CKO_00967 964944 - 964420 - | hypothetical protein CKO_00968 965733 - 965020 - | hypothetical protein CKO_00969 968111 - 965910 - | hypothetical protein TERM 1201 966353 - 966368 + g 74 -8.2 -3.96148 | CCACCGCGCCTTCCA CGCCGT AAAT GCGGCG TTTGTCGTCCACCAC TERM 1202 967613 - 967649 + g 100 -7.2 -5.14965 | overlap 967614 TAAAGCCGCTTTTGG TGCCAGCCTCAAACTC CATCT GGGTTTCCGGCTGGCC TTTTTTGGTCACGAT TERM 1203 967614 - 967648 + g 76 -10.7 -3.68256 | overlap 967613 AAAGCCGCTTTTGGT GCCAGCCTCAAACTC CATCT GGGTTTCCGGCTGGC CTTTTTTGGTCACGA CKO_00970 969471 - 968137 - | hypothetical protein TERM 1204 968169 - 968187 + g 71 -4.4 -4.58395 | opp_overlap 968168 968171, overlap 968170 968171 TGTAGCGAGTTAAAG AAGCAGCC TCC GGCTGCGG TTTTTCCCGGCTGCC TERM 1205 968185 - 968171 - G 85 -11.4 -3.9693 | opp_overlap 968171 968170 968169, overlap 968168 TAGCGAGTTAAAGAA GCAGCC TCC GGCTGC GGTTTTTCCCGGCTG CKO_00971 971208 - 969475 - | hypothetical protein TERM 1206 969631 - 969621 - G 83 -8.2 -4.4727 | overlap 969622 TGAAGAGTGAGAAAA GCGC AAA GCGC GCTGACATTTGTGGA TERM 1207 969717 - 969695 - G 80 -5.4 -4.86001 | AGCAGTTGATAAAAA CGCCTCTCCG GTA CGCCAAGGCG AGCCATCAGCGGCGA TERM 1208 970504 - 970482 - G 74 -8.4 -4.03413 | opp_overlap 970488 970489, overlap 970468 970460 970485 ACTCGCCGAGAGAAA CCATCCTGCC TTC GGCAAGATCG GCGATGAAGTCGAGG TERM 1209 971252 - 971232 - R 100 -15.5 -3.61715 | GACCTCCGTGAAGAA GTGATGGCG ATC CGCCATCAC CATGCGCGAGCGCTT CKO_00972 972155 - 971208 - | hypothetical protein TERM 1210 971783 - 971765 - G 71 -8 -3.89614 | overlap 971766 CGTAACGGCGATAAA CCTCGCCC TGC GGACGGGG CGGGCGCAGCGGGAA CKO_00974 973553 - 972156 - | hypothetical protein CKO_00973 973536 - 973859 + | hypothetical protein CKO_00975 973989 - 973864 - | hypothetical protein TERM 1211 975101 - 975142 + GH 85 -4.3 -5.17353 | gap 1, opp_overlap 975112 975113, overlap 975112 975113 975115 975138 ATTGCTGGTGCCGCT GGTGTCGAAAACCGGCGCCG CAG CGGCGCTGATTGT-GGCGGC TTTTTTCGTCGCTGT TERM 1212 975132 - 975112 - gH 87 -10.3 -4.07568 | opp_overlap 975101 975112 975113 975115, overlap 975113 CGCTGGTGTCGAAAA CCGGCGCCG CAG CGGCGCTGA TTGTGGCGGCTTTTT TERM 1213 975112 - 975132 + GH 77 -10.3 -3.3341 | opp_overlap 975112 975113, overlap 975101 975113 975115 CGCTGGTGTCGAAAA CCGGCGCCG CAG CGGCGCTGA TTGTGGCGGCTTTTT TERM 1214 975131 - 975113 - gH 78 -11.6 -3.04398 | opp_overlap 975112 975101 975113 975115, overlap 975112 GCTGGTGTCGAAAAC CGGCGCCG CAG CGGCGCTG ATTGTGGCGGCTTTT TERM 1215 975113 - 975131 + GH 83 -13.8 -2.59323 | opp_overlap 975113 975112, overlap 975112 975101 975115 GCTGGTGTCGAAAAC CGGCGCCG CAG CGGCGCTG ATTGTGGCGGCTTTT TERM 1216 975115 - 975129 + GH 79 -12.8 -2.83119 | opp_overlap 975113 975112, overlap 975113 975112 975101 TGGTGTCGAAAACCG GCGCCG CAG CGGCGC TGATTGTGGCGGCTT CKO_00976 974013 - 975224 + | hypothetical protein CKO_00977 975133 - 975315 + | hypothetical protein TERM 1217 975629 - 975584 - gT 71 -9.5 -3.14931 | opp_overlap 975616 GGCATGGGCGATTAA CGCCAGACCCGGCGACGCCAT TCAG ATGGTGGCGCCTGACGCGGCG TATGCTGAAGACAGC CKO_00978 975240 - 976136 + | hypothetical protein TERM 1218 976146 - 976178 + T 83 -13.5 -3.18239 | opp_overlap 976146 GCGTGATAATAAAAA GCCCGCATCATGAAA TTA TTCCATTATGCGGGC TTAGTGCAGTATCTA TERM 1219 976178 - 976146 - T 100 -15.7 -5.18726 | opp_overlap 976146 GCGTGATAATAAAAA GCCCGCATCATGAAA TTA TTCCATTATGCGGGC TTAGTGCAGTATCTA CKO_00979 977382 - 976201 - | hypothetical protein CKO_00980 977791 - 978486 + | hypothetical protein TERM 1220 979214 - 979231 + G 72 -2.5 -4.91109 | overlap 979215 TCGTGCGGGTCATTG ACGCCCG ACGC CCGGCGA TTTTTGTGCTCGAAA TERM 1221 979305 - 979283 - g 78 -5.7 -4.68994 | gap 1 ACGACCAGGGAAAAA CGTTTCGCAT CATT ATGC-AAACG CTTGACGAACTGGGG CKO_00981 978559 - 979992 + | DNA cytosine methylase CKO_00982 979973 - 980443 + | hypothetical protein CKO_00983 981352 - 980432 - | hypothetical protein CKO_00985 981474 - 981241 - | hypothetical protein TERM 1222 981755 - 981771 + GrH 86 -9.4 -4.4009 | ATCCTGGTGCCTCTG GCGCTG CTGAT CAGCGC TTTTATCCCGTGGGC CKO_00984 981425 - 982441 + | hypothetical protein TERM 1223 982582 - 982623 + GTr 77 -8 -4.13767 | ACGCATGATCGTAAC CGGTTATTCCAGCGGCAT GGTGGA GTGCCGTTGGTATGACGG TTTTGGCGTCAAACG CKO_00987 982770 - 982585 - | hypothetical protein CKO_00986 982460 - 982702 + | hypothetical protein TERM 1224 982730 - 982711 - Gf 86 -12.1 -3.6053 | opp_overlap 982711, overlap 982707 TGTCTGATAAAGGAA CGCCCGG TTAATG CCGGGCG TTTTGTTACCCCAGA TERM 1225 982711 - 982730 + gF 100 -12.8 -4.63218 | opp_overlap 982707 982711 TGTCTGATAAAGGAA CGCCCGGT TAAT GCCGGGCG TTTTGTTACCCCAGA TERM 1226 983449 - 983469 + G 79 -11.1 -3.6502 | opp_overlap 983448 983449 983450 983452, overlap 983450 TCCCAACGACAAAAT TCAGCGCGC GGC GTGCGCTGG TTTAGCTCGCCGGTG TERM 1227 983450 - 983468 + G 72 -12.4 -2.78798 | opp_overlap 983449 983448 983450 983452, overlap 983449 CCCAACGACAAAATT CAGCGCGC GGC GTGCGCTG GTTTAGCTCGCCGGT CKO_00988 982900 - 984516 + | hypothetical protein TERM 1228 984650 - 984670 + T 100 -16.9 -5.40072 | opp_overlap 984645 CATAAGCAAGTTTGA TCCCGGCTC TGC GAGCCGGGA TTTTTTTCACCCCAG CKO_00990 984977 - 984687 - | hypothetical protein CKO_00991 985045 - 985233 + | hypothetical protein CKO_00992 985912 - 985289 - | hypothetical protein TERM 1229 985339 - 985368 + g 74 -2.3 -5.1167 | gap 1, overlap 985342 TATCCGTCAGCCGCA CGACATGATAGATA ACC TGTTTATTATG-CG TTTTTATCTTCCGTT CKO_00993 986987 - 986193 - | flagellar biosynthesis protein FliR CKO_00994 987263 - 986994 - | flagellar biosynthesis protein FliQ CKO_00995 988010 - 987273 - | flagellar biosynthesis protein FliP CKO_00996 988384 - 988010 - | flagellar biosynthesis protein FliO CKO_00997 988800 - 988387 - | flagellar motor switch protein FliN CKO_00998 989801 - 988797 - | flagellar motor switch protein FliM CKO_00999 990273 - 989806 - | flagellar basal body-associated protein FliL TERM 1230 990236 - 990247 + g 71 -5.8 -4.23674 | opp_overlap 990235 AAAGGGATCCAAATT GAGC GTTT GCTC TTTCTGTTAATCGCG CKO_01000 991592 - 990378 - | flagellar hook-length control protein TERM 1231 991371 - 991383 + g 90 -4.7 -5.40474 | overlap 991370 991372 CAGCGCTGTCGTCTG CGGCG TAT CGCCA TTTTTTTGCAGCAAT TERM 1232 991372 - 991382 + g 71 -8.2 -3.83561 | overlap 991370 991371 AGCGCTGTCGTCTGC GGCG TAT CGCC ATTTTTTTGCAGCAA CKO_01001 992032 - 991589 - | flagellar biosynthesis chaperone TERM 1233 991893 - 991911 + g 79 -7.5 -4.38637 | TTGTTGCGATACTCA TGCTGAT AATCG ATCAGCA TTTTCAGTTGTTCTT CKO_01002 993424 - 992054 - | flagellum-specific ATP synthase CKO_01003 994128 - 993424 - | flagellar assembly protein H CKO_01004 995119 - 994121 - | flagellar motor switch protein G CKO_01005 996785 - 995109 - | flagellar MS-ring protein CKO_01006 996806 - 996955 + | hypothetical protein TERM 1234 996999 - 996985 - f 72 -2.8 -5.00616 | CTGCTGTGTAAAAAA TCATCC AGG GGATTA GCATGTCAGCAATAC CKO_01007 997002 - 997316 + | flagellar hook-basal body protein FliE CKO_01008 997613 - 997380 - | hypothetical protein CKO_01009 998815 - 997610 - | putative inner membrane protein CKO_01010 998999 - 999415 + | hypothetical protein CKO_01011 1000983 - 999496 - | cytoplasmic alpha-amylase TERM 1235 999628 - 999605 - G 80 -4.6 -5.02074 | opp_overlap 999605 999608 CGATTGCCTAAAAAA TCACGCCA GGTCTTGT TGGCGTAA TTTTCACCTAGCGTA TERM 1236 1000741 - 1000773 + g 71 -7.7 -3.96624 | overlap 1000730 1000725 1000744 GGCGGCCAGCAGCTG CGCTTTGTCGCCATA TTT TGTGGCGACAGATCC TTTCTGATCAAACTC TERM 1237 1000744 - 1000770 + g 76 -12.4 -3.04122 | overlap 1000725 1000741 GGCCAGCAGCTGCGC TTTGTCGCCATA TTT TGTGGCGACAGA TCCTTTCTGATCAAA TERM 1238 1000983 - 1001030 + r 84 -8.6 -4.58395 | overlap 1000986 GCGTGGGGTTTTTCA TCTTCCGTGCTCCAGAAG CCGTCAGGCTAA CTTCTGGAGTATGGATGA TTTTTCACAGGTGGA CKO_01012 1001414 - 1001052 - | flagellar biosynthesis protein FliT TERM 1239 1001167 - 1001179 + g 73 -5.5 -4.66163 | overlap 1001168 AGCTCTTCCATACGG TGCTG CAA CAGCG TTTTTAACTCAGCCT TERM 1240 1001383 - 1001367 - G 72 -12.3 -2.55668 | overlap 1001366 CATTGTGATACTAAG GGCATGC AGG GCATGCC AGTCGGTAAGTGACG CKO_01013 1001824 - 1001414 - | flagellar protein FliS CKO_01014 1003261 - 1001834 - | hypothetical protein CKO_01015 1003599 - 1004471 + | hypothetical protein TERM 1241 1004513 - 1004498 - f 83 -9 -4.37092 | opp_overlap 1004498 AGCCTCTTTATAAAA CCAGTC TTCG GACTGG TTTTTTTATTCCCGC TERM 1242 1004498 - 1004513 + F 100 -9 -5.7946 | opp_overlap 1004498 AGCCTCTTTATAAAA CCAGTC TTCG GACTGG TTTTTTTATTCCCGC TERM 1243 1004895 - 1004913 + G 81 -3.7 -5.24449 | overlap 1004897 GCTCTACTGGGCAGT GCGCCGG ATAAC CTGGCAC TTTTTTCACTTTCTC TERM 1244 1005117 - 1005104 - g 72 -2.3 -4.85782 | TGGTGCAAAAATAAA CGAGA TTAT TCGCG ACGCGGTACAAATTC TERM 1245 1005480 - 1005490 + G 77 -8.2 -4.1964 | opp_overlap 1005479 GATTTCGCAGTGAAT CGCG GCA CGCG TTTTAGCCTGTTGAC TERM 1246 1006053 - 1006063 + G 80 -4.6 -5.00884 | GCGGCTGCTCCCAAA GCCT GGC GGGC TTTTTTGCAGCAGCT TERM 1247 1006210 - 1006199 - g 74 -2.2 -5.06414 | GCCGGGCAAGAAAAA GACA TCCA TGCC GGCTTTGGCCCCGGT TERM 1248 1007745 - 1007761 + G 72 -2.2 -4.85599 | overlap 1007747 ATCGCTTCCAGACAG TGCAGC GCCGG GCTGAA TTTTTGTGGGCTGCA TERM 1249 1007809 - 1007820 + G 75 -3.6 -4.84311 | ACAAAGAACAGTACA TCGC TAAG GCGG TTTTGTTGTCTGAAC CKO_01016 1004733 - 1008005 + | hypothetical protein TERM 1250 1008428 - 1008449 + G 70 -2.9 -4.82901 | opp_overlap 1008425, overlap 1008429 TAATCCACAGCAGAT CGTCTGGGA TCAC TCTCAGGCC TTTTTCTCCGCGCCG TERM 1251 1008877 - 1008891 + G 85 -4.2 -5.20606 | opp_overlap 1008863, overlap 1008889 ATCTGCGCGAAGCGC TTCGTC AGC GCCGAA TTTTTATTCCTGTTT CKO_01017 1008249 - 1009082 + | hypothetical protein TERM 1252 1009570 - 1009548 - g 71 -7.7 -4.01902 | opp_overlap 1009548, overlap 1009549 ACAGCGAGTAAATAA CCGCCTGTC TCTGG AACAGGCGA TTGAATCCGTCGCGC TERM 1253 1010070 - 1010082 + G 70 -3.3 -4.83169 | overlap 1010071 TGGTTTTGCGGTACC TGCCG TCA TGGCG TTTTTATACCAGAGT CKO_01018 1009069 - 1010349 + | hypothetical protein TERM 1254 1011080 - 1011094 + G 74 -2.1 -5.1356 | gap 1, overlap 1011080 1011081 TGGCGTCTCGCACAG C-CAGC AGAA GCTGAG TTTTTCTTCCTCGGG CKO_01019 1010361 - 1011428 + | hypothetical protein CKO_01021 1011425 - 1012114 + | hypothetical protein CKO_01022 1012114 - 1013331 + | hypothetical protein CKO_01023 1013508 - 1014197 + | flagellar biosynthesis sigma factor TERM 1255 1014216 - 1014199 - f 74 -8.4 -3.97368 | opp_overlap 1014199 1014198, overlap 1014195 TGGGTAAGTTATAAA GGGCGA TCGTCG TCGCCC CTTAATAGTGCCGCA CKO_01024 1014258 - 1014809 + | protein FliZ CKO_01025 1014876 - 1015697 + | cystine transporter subunit TERM 1256 1015718 - 1015736 + F 93 -6.6 -5.68438 | opp_overlap 1015718 ATAATTGCAAAAAAA GGCGCTTT AAT ACGGCGCC TTTTTTATTTCATCC TERM 1257 1015736 - 1015718 - f 86 -4.5 -5.48303 | opp_overlap 1015718 ATAATTGCAAAAAAA GGCGC TTTAATACG GCGCC TTTTTTATTTCATCC CKO_01026 1015787 - 1016791 + | D-cysteine desulfhydrase TERM 1258 1016949 - 1016979 + G 74 -2.4 -5.04597 | gap 1, overlap 1016956 1016966 CGCTGATGCGTATGT CGCCCCTGCT-GC CTGTCC GCTGGCTGGCGCG TTTTTATATCTCCAT CKO_01027 1016813 - 1017481 + | hypothetical protein TERM 1259 1018081 - 1018059 - g 81 -8.5 -4.25104 | gap 1 GCTGGCGCAGGAAAA GCG-CACGAT GGTC ATCGTGACGC ATGAAATGAGCTTTG CKO_01028 1017478 - 1018230 + | putative amino-acid ABC transporter ATP-binding protein YecC TERM 1260 1018242 - 1018275 + F 77 -10.4 -3.41836 | overlap 1018240 ATAAGTGTTTTTGCG CACTCGCCTGAAAT AATCCC GTTTTGGGCGAGTG TATTTAAATAAATAT CKO_01029 1018464 - 1019186 + | DNA-binding transcriptional activator SdiA TERM 1261 1019219 - 1019245 + T 100 -15.2 -3.95022 | opp_overlap 1019196 1019219 GTGCCAGACGCAAAA CCGGCTGAAAGT TTC ACTCTCAGCCGG TTTCCTGTTACTGGC TERM 1262 1019245 - 1019219 - T 100 -17.4 -4.2349 | opp_overlap 1019219, overlap 1019196 GTGCCAGACGCAAAA CCGGCTGAAAGT TTC ACTCTCAGCCGG TTTCCTGTTACTGGC CKO_01030 1019477 - 1019253 - | hypothetical protein CKO_01031 1019940 - 1020593 + | response regulator CKO_01032 1020593 - 1022425 + | excinuclease ABC subunit C CKO_01033 1022482 - 1023030 + | phosphatidylglycerophosphate synthetase CKO_01034 1023020 - 1023160 + | hypothetical protein TERM 1263 1023224 - 1023208 - f 73 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 1264 1023441 - 1023421 - f 72 -10.5 -2.89742 | opp_overlap 1023438, overlap 1023424 TGGAATCGGTAGACA CAAGGGATT TAA AATCCCTCG GCGTTCGCGCTGTGT TERM 1265 1023527 - 1023540 + F 100 -8.1 -5.77988 | opp_overlap 1023527 AGCAGTGTCGTAAAA CCACC TCCG GGTGG TTTTTTTGTGTCTGT TERM 1266 1023540 - 1023527 - f 76 -8.1 -4.08945 | opp_overlap 1023527 AGCAGTGTCGTAAAA CCACC TCCG GGTGG TTTTTTTGTGTCTGT CKO_01039 1023667 - 1024332 + | hypothetical protein TERM 1267 1024338 - 1024362 + T 81 -8.6 -4.4017 | opp_overlap 1024343, overlap 1024343 TCTGCACTAAACACA AAAAAGGGGC TTAAC GCCCCTTTTG TTTTATCCCACTTCA TERM 1268 1024343 - 1024357 + T 100 -8.5 -5.18371 | opp_overlap 1024343, overlap 1024338 ACTAAACACAAAAAA GGGGC TTAAC GCCCC TTTTGTTTTATCCCA TERM 1269 1024357 - 1024343 - T 100 -8.5 -5.5762 | opp_overlap 1024343 1024338 ACTAAACACAAAAAA GGGGC TTAAC GCCCC TTTTGTTTTATCCCA CKO_01040 1025603 - 1024365 - | hypothetical protein TERM 1270 1024560 - 1024533 - G 74 -11.2 -3.2327 | GGAAGGGATCAGCAA CGCCAGCACCGC CAGC GCGACGCCAGCG TATCCCAGCGCCATC TERM 1271 1024808 - 1024794 - G 72 -11.4 -3.07291 | opp_overlap 1024794 1024793, overlap 1024784 AACCACCTCACGCAA GGCCTG CAA CAGGCC ATTTAACCCGGCATG CKO_01041 1025805 - 1026044 + | hypothetical protein TERM 1272 1026047 - 1026075 + T 100 -14.7 -4.68645 | opp_overlap 1026052, overlap 1026048 CTGCCGCCATTGAGC CTAAACGGTGAGG GGG CCTCACCGTTTAA TTTTAGTTTTGGGTA TERM 1273 1026048 - 1026074 + T 100 -18.2 -3.40102 | opp_overlap 1026052, overlap 1026047 TGCCGCCATTGAGCC TAAACGGTGAGG GGG CCTCACCGTTTA ATTTTAGTTTTGGGT TERM 1274 1026070 - 1026052 - T 95 -14.6 -3.61178 | opp_overlap 1026048 1026047 GCCATTGAGCCTAAA CGGTGAGG GGG CCTCACCG TTTAATTTTAGTTTT CKO_01042 1026575 - 1026078 - | ferritin TERM 1275 1026761 - 1026742 - R 79 -9.3 -4.12267 | ATGAGAATAATTAAA GCCAGCA GCGTCA TGCTGGC TAAAGATATTAATAC CKO_01043 1027105 - 1026770 - | hypothetical protein CKO_01044 1027365 - 1028003 + | hypothetical protein TERM 1276 1028009 - 1028049 + F 79 -9.2 -4.10552 | gap 2, opp_overlap 1028016, overlap 1028048 TCTCGGTTAATGTGT CATG-TAAGCCGGAT-AACG CGG CGTTTATCCGGCTTACCGCG TTTGCTTTGCTACCG TERM 1277 1028041 - 1028016 - f 80 -12.7 -3.06133 | gap 1, opp_overlap 1028009 TAATGTGTCATGTAA GCCGGAT-AACG CGG CGTTTATCCGGC TTACCGCGTTTGCTT CKO_01045 1028115 - 1028366 + | hypothetical protein TERM 1278 1028418 - 1028373 - T 95 -12.5 -4.10552 | gap 1, overlap 1028359 1028387 GCGCACTAAAGTAAA GCGACTGCGTAACAGCCTCCCG GCA CGGGAGGC-GTAACGTCGTGGC AATATAGCGGTTAGT TERM 1279 1028405 - 1028387 - T 93 -16 -3.03243 | overlap 1028373 AGCGACTGCGTAACA GCCTCCCG GCA CGGGAGGC GTAACGTCGTGGCAA CKO_01046 1028932 - 1028429 - | hypothetical protein CKO_01047 1029029 - 1029169 + | hypothetical protein CKO_01048 1029347 - 1029195 - | hypothetical protein TERM 1280 1029438 - 1029428 - g 74 -2.4 -4.98531 | GTCGTAAATGAAAAA GGTC GCT GTCC TGCTGGCGCCAGGAT CKO_01049 1029420 - 1029977 + | hypothetical protein TERM 1281 1030013 - 1029984 - f 73 -10.7 -3.00525 | opp_overlap 1029980 1029979 GCCTGGTAAAGCATA TTTCCCCGGATGC GCCT GCATTCGGGGACA AGGATTTGCTGGCTG TERM 1282 1030318 - 1030341 + G 74 -10.3 -3.49475 | opp_overlap 1030315 1030314, overlap 1030319 AATTTACTAAAGCGC TGGCAGCCA TCGGTC TGGCTGCCG TTATGTCACAATCCG CKO_01050 1030296 - 1031285 + | hypothetical protein TERM 1283 1031360 - 1031313 - g 95 -12.9 -4.13945 | gap 1, overlap 1031314 ATGGCGACGCGAAAA CGGCTTATCCGGCCTGC-GAAT TGCGT ATTCAGTAGGCCGGATAAGGCA ACGCCGTCATCCGGC TERM 1284 1031359 - 1031314 - g 91 -14.2 -3.08046 | gap 1, overlap 1031313 TGGCGACGCGAAAAC GGCTTATCCGGCCTGC-GAAT TGCGT ATTCAGTAGGCCGGATAAGGC AACGCCGTCATCCGG CKO_01051 1031298 - 1032914 + | L-arabinose transporter ATP-binding protein CKO_01052 1033008 - 1033916 + | L-arabinose transporter permease protein TERM 1285 1033910 - 1033898 - f 72 -2.6 -4.99043 | CCGTTACAAACAAAA GGCG AAGCG CACC GTTTAATGAAATAAA TERM 1286 1033950 - 1033985 + F 80 -9.7 -3.91897 | overlap 1033952 1033955 TTTAGTTTAGCTCCT CCCGATAGCCAGCCG CTACCC CGGCTGGCTATTGTC TTTCTAAATGGCGAG TERM 1287 1033952 - 1033983 + F 100 -16.7 -3.5511 | overlap 1033950 1033955 TAGTTTAGCTCCTCC CGATAGCCAGCCG CTACCC CGGCTGGCTATTG TCTTTCTAAATGGCG TERM 1288 1033955 - 1033980 + F 100 -14.8 -3.90766 | overlap 1033952 1033950 TTTAGCTCCTCCCGA TAGCCAGCCG CTACCC CGGCTGGCTA TTGTCTTTCTAAATG CKO_01053 1034025 - 1034885 + | trehalose-6-phosphate phosphatase TERM 1289 1035042 - 1035021 - gT 76 -3 -5.03145 | TAAGCCGTTAAAAAA GGTCACAC GAGGCA ATATGACC TGGGCGTCTTTTAAT TERM 1290 1036181 - 1036170 - gT 70 -3 -4.78107 | GACGATTATTAAAAA TGAT ATTA ATCA CTGGCAGCAACGGTT CKO_01054 1034854 - 1036281 + | trehalose-6-phosphate synthase CKO_01055 1036716 - 1036288 - | universal stress protein UspC TERM 1291 1036372 - 1036343 - G 75 -12.3 -2.90075 | gap 1, opp_overlap 1036339 CTGGCGCTAACGACA CTTTTCGCTGAGCA GGA CGCTC-GCGAAAAG AAGCTGTGATTATGA TERM 1292 1037219 - 1037238 + H 71 -8 -3.92522 | AGTATTTGGATGATT TATGTGAT CTGG ATCACATA TTTCTCAAATTCGCA TERM 1293 1037358 - 1037374 + H 70 -5 -4.39568 | overlap 1037360 1037360 CGTGTAAAAACCTGA CACCCC ATTAA GGGGGG TTTTACTGTATGCAT CKO_01056 1037501 - 1037860 + | transcriptional activator FlhD CKO_01057 1037860 - 1038441 + | transcriptional activator FlhC TERM 1294 1038468 - 1038491 + TF 100 -15.4 -5.53288 | opp_overlap 1038464 1038463 TGGACAAACACTCCA GCAGCGGTAA GTAA TTACCGCTGC TTTTTTTGCCTTGCC CKO_01060 1039520 - 1039317 - | hypothetical protein CKO_01058 1038619 - 1039455 + | flagellar motor protein MotA CKO_01059 1039452 - 1040378 + | flagellar motor protein MotB TERM 1295 1040713 - 1040702 - g 73 -5.8 -4.38712 | overlap 1040712 TCGACGCCTATAAAA GCTC GGAA GAGC CGGATGCCGCAAGCT CKO_01061 1040389 - 1042416 + | chemotaxis protein CheA CKO_01062 1042417 - 1042941 + | purine-binding chemotaxis protein TERM 1296 1043025 - 1043071 + G 75 -12.5 -2.60496 | overlap 1043024 1043022 CCGGATGGCGCTTTG CTTATCCGGCCTACACATG ACTCATCAC TGTATGTAGGCCGGATAAG GTGTTTACACCGCCA CKO_01063 1042962 - 1043111 + | hypothetical protein CKO_01064 1044368 - 1043100 - | hypothetical protein CKO_01065 1044636 - 1044499 - | hypothetical protein TERM 1297 1044525 - 1044558 + g 72 -3.9 -4.82901 | overlap 1044528 GTTGTGTTCTGACGG CTGTGCTTATGTGAT CGGA GTCACATAAGAATCG TTTTTGTCGGCAAAA CKO_01066 1044773 - 1046431 + | hypothetical protein TERM 1298 1046631 - 1046648 + G 75 -6.2 -4.63218 | overlap 1046632 AGCAACGTGCAGCAT TGGCGC AAACAC GCGCCG TTTTATTACAGGCCA CKO_01067 1046462 - 1048075 + | methyl-accepting protein IV TERM 1299 1048160 - 1048146 - g 71 -11.4 -2.88999 | opp_overlap 1048148 1048155, overlap 1048148 TTGTTACAGATGACA CAGCGC CTC GCGCTG TCTGACGCGCATTTT TERM 1300 1048520 - 1048482 - g 71 -10.4 -3.27022 | gap 1 TCTACCGGAGAGGAA CCCTACAGCAT-CGCCA TTACGC TGGCGGATGCCTTAGGG ATGGCGCCGGGGCGC TERM 1301 1048810 - 1048834 + G 71 -4.2 -4.66318 | opp_overlap 1048810, overlap 1048813 TCTATTTTGATAAAA CAACGCAGCA GGACA TTCTGCGTCG TTTTGTTCCACTCCT TERM 1302 1048834 - 1048810 - g 73 -6.4 -4.38712 | opp_overlap 1048810 1048813 TCTATTTTGATAAAA CAACGCAGCA GGACA TTCTGCGTCG TTTTGTTCCACTCCT CKO_01068 1048140 - 1048961 + | chemotaxis methyltransferase CheR CKO_01069 1048958 - 1050007 + | chemotaxis-specific methylesterase CKO_01070 1050024 - 1050413 + | chemotaxis regulatory protein CheY CKO_01071 1050424 - 1051068 + | chemotaxis regulator CheZ TERM 1303 1051077 - 1051111 + TF 82 -10.9 -3.53811 | gap 1, opp_overlap 1051081, overlap 1051078 GTTCTGATGCGGTAA GGTATCCTCAGGTTGT GCCG ACAACCTGAGGA-ACG TTTAGCGCAGATCCA TERM 1304 1051078 - 1051110 + TF 86 -14.4 -2.72144 | gap 1, opp_overlap 1051081, overlap 1051077 TTCTGATGCGGTAAG GTATCCTCAGGTTGT GCCG ACAACCTGAGGA-AC GTTTAGCGCAGATCC TERM 1305 1051108 - 1051081 - Tf 100 -17.2 -2.52896 | opp_overlap 1051078 1051077 TGATGCGGTAAGGTA TCCTCAGGTTGT GCCG ACAACCTGAGGA ACGTTTAGCGCAGAT CKO_01073 1052210 - 1051113 - | hypothetical protein TERM 1306 1051589 - 1051612 + gF 71 -9.6 -3.18383 | gap 1 AGATATTTGATACGT GCTGTG-CGCT GCC AGCGTCGCAGC TTCCTGAGTCAAAAT CKO_01074 1054740 - 1052260 - | hypothetical protein CKO_01072 1052179 - 1052379 + | hypothetical protein TERM 1307 1053970 - 1053951 - GT 71 -10.6 -2.71364 | opp_overlap 1053937 1053935 CGATGCCGCGAATCA CCGGCGCG TAGC CGCGCTGG CTGTAAGGCAGCATC TERM 1308 1054706 - 1054696 - GT 74 -6.8 -4.21936 | CGCAGAAGGCGAAAA GCGA TAC TCGC GCGCGTTCGCGACAC CKO_01075 1055504 - 1054812 - | hypothetical protein CKO_01076 1056229 - 1055654 - | hypothetical protein CKO_01077 1056705 - 1056346 - | hypothetical protein TERM 1309 1057840 - 1057860 + G 74 -6.8 -4.36914 | ACAACCTGAAAATCT TCCTGTGC CTGAA GCACTGGA TTTTATGAACGAGAA CKO_01078 1056740 - 1057891 + | flagellar biosynthesis protein FlhB TERM 1310 1058901 - 1058883 - g 84 -5.8 -5.06414 | overlap 1058887 GGGCGTGAACAAAAA CCACCGGC AGA GCCGCAGG CCGTCAAGATGCCGG TERM 1311 1059840 - 1059863 + G 71 -4.5 -4.56775 | gap 1, opp_overlap 1059806 CTGCTGGTGAACCAC GCGCTAC-GC CCGCT GCTGTCGCGC TTTTTACGCCGGAGT CKO_01079 1057884 - 1059962 + | flagellar biosynthesis protein FlhA TERM 1312 1060150 - 1060179 + G 74 -7.8 -4.19624 | gap 1, opp_overlap 1060145 1060150, overlap 1060151 1060164 GCGCTATGAACTGAA TG-GCCCGACGCC GGCGG GGCTTCGGGCGCG TTTGTGTTCACAGTC CKO_01080 1059962 - 1060354 + | hypothetical protein TERM 1313 1060397 - 1060371 - f 85 -13.8 -3.01712 | TCCCCCGCGCCAACA GCAGCCAGCA GACAACG TGCTGGCTGC CTCACAATTTTGACC TERM 1314 1060524 - 1060512 - f 72 -4.9 -4.56775 | opp_overlap 1060472 1060471 1060512 ATGGCGTGGCAAAAA TGAAA AGG TTTCA CTTCCTGTTAGCTTT TERM 1315 1061062 - 1061045 - g 71 -8.3 -3.82946 | overlap 1061047 TGACTTCAAACAGAA GACCCGG TTCT CCGGGGC GCGTATCTCAATGGC TERM 1316 1061060 - 1061047 - g 71 -9.5 -3.49634 | overlap 1061045 ACTTCAAACAGAAGA CCCGG TTCT CCGGG GCGCGTATCTCAATG TERM 1317 1061298 - 1061284 - g 77 -4.2 -4.94147 | overlap 1061285 1061286 AAGAAGAGAAGAAAA GCCTGA CGT TCAGCC AGAGTATGAGCCGTT CKO_01081 1060617 - 1062200 + | hypothetical protein TERM 1318 1063177 - 1063167 - g 77 -8.2 -4.10657 | opp_overlap 1063166 1063168, overlap 1063168 GCAGACGGCTGAAAA CGCG ATT CGCG GTATCGTGAAACACA CKO_01082 1062205 - 1063344 + | hypothetical protein CKO_01083 1065281 - 1063440 - | hypothetical protein TERM 1319 1063479 - 1063512 + g 80 -8.7 -4.09685 | gap 1 CATGATTTGCCGCAT CACCGGC-GCGGCGGT CAC GCCGTCGCTGCCGCCG TTTTCCAGAATCAAC TERM 1320 1063533 - 1063545 + g 70 -3.3 -4.82901 | CAGAATCAACGCCAC CGCGA CTT TCGGG TTTTTATACGGCGCG TERM 1321 1063957 - 1063970 + g 81 -2.3 -5.40625 | overlap 1063958 ACTGAAATCGTATCC CCCTG ATAC CAGGC TTTTTTATGTACTCT TERM 1322 1064250 - 1064265 + g 74 -10.4 -3.53012 | opp_overlap 1064261 GAAGAAGGTGGTTTG CGGCGT GATA ACGCCG TTTAACAGCGCAGAC TERM 1323 1064546 - 1064571 + g 74 -2.5 -5.00616 | gap 1 CCAGCGTCAGGTGGA TGTCTTTGCCGG CAA CGGGCGG-GACA TTTTTTAACAGGCGC TERM 1324 1065086 - 1065112 + g 95 -12.2 -4.41797 | opp_overlap 1065086, overlap 1065106 TGCGATCGTAGATGA TGCCGCGCGTCG GGG CGACGGGCAGCA TTTTGATGTCATTTT TERM 1325 1065112 - 1065086 - G 81 -14.4 -2.63596 | opp_overlap 1065086 1065106 TGCGATCGTAGATGA TGCCGCGCGTCG GGG CGACGGGCAGCA TTTTGATGTCATTTT CKO_01084 1065456 - 1065307 - | hypothetical protein TERM 1326 1065355 - 1065345 - G 73 -5.4 -4.62984 | opp_overlap 1065345 GCATGACAGACAAAA GATG TTC CATC TCTCTACGGAAATGT TERM 1327 1065528 - 1065545 + r 83 -9.8 -4.14739 | opp_overlap 1065528 CGGGAAAATAAAAAA CCCGCG ACATAG CGCGGG TTTTCACATCACTCG TERM 1328 1065545 - 1065528 - R 100 -9.8 -5.79595 | opp_overlap 1065528 CGGGAAAATAAAAAA CCCGCG ACATAG CGCGGG TTTTCACATCACTCG CKO_01085 1067300 - 1065567 - | arginyl-tRNA synthetase CKO_01086 1067385 - 1067561 + | hypothetical protein CKO_01087 1067539 - 1068108 + | hypothetical protein CKO_01088 1068142 - 1068888 + | copper homeostasis protein CutC TERM 1329 1068936 - 1068960 + G 100 -10 -5.51165 | TGCTTGCTCGTACCA GGCCCCTG CCATTTCAA CAGGGGCC TTTTTTTGCGCTTTT CKO_01089 1068866 - 1069021 + | hypothetical protein CKO_01090 1070022 - 1069054 - | hypothetical protein CKO_01091 1070762 - 1070019 - | hypothetical protein TERM 1330 1070480 - 1070509 + g 86 -10.7 -4.19506 | opp_overlap 1070483 GGCGGCAGCGTTCAA TCATCGCCGGGGA GTTG TCGACGGCGATGA TTTTACAGTTGGCAT CKO_01092 1071198 - 1070803 - | hypothetical protein CKO_01093 1072068 - 1071250 - | hypothetical protein TERM 1331 1071732 - 1071721 - G 74 -7.2 -4.1673 | CAACGCGTCAAGAAA GCGC CAGA GCGC AGGGAGGTCGCGCGG CKO_01094 1072631 - 1072065 - | hypothetical protein TERM 1332 1073152 - 1073142 - g 72 -2.4 -4.91109 | overlap 1073143 GCGTGACGAGAAAAA CGTC AAC GCCG ACATGGCGACGGGCG CKO_01095 1072897 - 1074669 + | aspartyl-tRNA synthetase CKO_01096 1074671 - 1075114 + | dATP pyrophosphohydrolase CKO_01097 1075143 - 1075883 + | hypothetical protein TERM 1333 1076154 - 1076142 - g 76 -10.5 -3.63515 | GTTTATGGCGAAGAA CGCGG ACT CCGCG CTTAAGCTGGGTCAG CKO_01098 1075921 - 1076442 + | Holliday junction resolvase CKO_01100 1076545 - 1076414 - | hypothetical protein TERM 1334 1076453 - 1076472 + gF 100 -12.2 -5.67063 | opp_overlap 1076450 1076453 GATAATGACAAATGA GGCTGGAT ATCT ATCCAGCC TTTTTTTATGATACC TERM 1335 1076472 - 1076453 - Gf 80 -12.2 -3.07891 | opp_overlap 1076453, overlap 1076450 GATAATGACAAATGA GGCTGGAT ATCT ATCCAGCC TTTTTTTATGATACC CKO_01099 1076523 - 1077134 + | Holliday junction DNA helicase motor protein CKO_01101 1077143 - 1078153 + | Holliday junction DNA helicase B CKO_01102 1078242 - 1078150 - | hypothetical protein CKO_01103 1078298 - 1078164 - | hypothetical protein CKO_01104 1079032 - 1078247 - | high-affinity zinc transporter membrane component TERM 1336 1078308 - 1078283 - G 76 -5.3 -4.70515 | CATACTGAAAATAAA CAGCAGCGCGG CACA CAGCACCACTG ACGGGCCTGCCGGGG TERM 1337 1078572 - 1078560 - GR 70 -4.7 -4.42653 | ACGCCATCGACAAAA GCCAG ATC CGGGC TAATGGTCATCGACA CKO_01105 1079784 - 1079029 - | high-affinity zinc transporter ATPase TERM 1338 1080271 - 1080256 - g 73 -5.4 -4.60487 | overlap 1080258 GAGCACGGTGAAAAA GGTGAC GCAC ATCACC ATCATGGTGATTACA CKO_01106 1079848 - 1080798 + | high-affinity zinc transporter periplasmic component TERM 1339 1081432 - 1081416 - gf 73 -10.1 -3.36515 | opp_overlap 1081428, overlap 1081414 CGCCAGTGCGAAAGA CGCCGGT TTG ACCAGCG CAGAAGTCAGCGCCG CKO_01107 1080877 - 1082133 + | hypothetical protein TERM 1340 1082150 - 1082172 + G 100 -19.2 -5.8901 | AAATACGCTTATGGA GCCGGTACGC GAT GCGTACCGGC TTTTTTATTTTGTGT CKO_01108 1082081 - 1082272 + | hypothetical protein TERM 1341 1082451 - 1082434 - gT 77 -8.3 -4.07885 | GACGTCTGGGGAAAA GCGCCCG GCGT CGCGCGC TGATCAACTTATCTC CKO_01109 1082145 - 1083224 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 1342 1083247 - 1083230 - T 100 -11.3 -5.99154 | opp_overlap 1083230 CATCAAATAAAAAAA GCCTCTC GTCA GAGAGGC TTTTTTGTTACCCGG TERM 1343 1083230 - 1083247 + T 100 -11.3 -5.4505 | opp_overlap 1083230 CATCAAATAAAAAAA GCCTCTC GTCA GAGAGGC TTTTTTGTTACCCGG CKO_01110 1084751 - 1083309 - | pyruvate kinase TERM 1344 1083934 - 1083950 + g 73 -5 -4.65895 | CGATTCAACTGACGA GCGCGG CGAAT CAGCGC TTTTTGAATCCCGAC CKO_01111 1085744 - 1084875 - | DNA-binding transcriptional regulator HexR TERM 1345 1085368 - 1085335 - G 71 -10.4 -3.25942 | overlap 1085349 ACGGCCGCAGAGGAA CCCAGGCCAAAAAA GGCGAT TTTCTTCGCCTGGG TGAGCAAATCGACGG TERM 1346 1085364 - 1085349 - G 84 -6.1 -5.05782 | overlap 1085335 ACCCAGGCCAAAAAA GGCGA TTTTCT TCGCC TGGGTGAGCAAATCG TERM 1347 1085710 - 1085725 + g 100 -7.6 -5.26918 | overlap 1085700 GACTTGCTCAAATGT TCCAGT TGAG ACTGGA TTTTTTCTAGCATAT CKO_01112 1085885 - 1086091 + | hypothetical protein TERM 1348 1086142 - 1086176 + G 100 -17.2 -3.22388 | opp_overlap 1086156 CATGTGACCTGGTCA TTTTCGGCGCGAAAGG CGA CCTGGCGCGCCGAAAA TTGCTGCCTTCCCTG CKO_01113 1086102 - 1087577 + | glucose-6-phosphate 1-dehydrogenase TERM 1349 1087631 - 1087641 + T 73 -4 -4.7416 | opp_overlap 1087625 1087631 ATGATCTAACACAGA TTGT AGA ACAA TTTTTGCACTTTTAA CKO_01114 1087746 - 1087621 - | hypothetical protein TERM 1350 1087657 - 1087682 + g 100 -10.4 -5.80364 | gap 1 TTTTTGCACTTTTAA GCCTCGCGTGG ATTCA CC-CGCGGGGC TTTTTTTATTACACT CKO_01115 1087811 - 1089622 + | phosphogluconate dehydratase CKO_01116 1089660 - 1090301 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 1351 1090304 - 1090340 + T 70 -5 -4.43859 | gap 1, opp_overlap 1090308 1090309, overlap 1090308 CGCGAAACAGTAAGC CAAATGCCCGGT-GGCG CCGA CGCTTACCGGGCCTACG TTTTATAGGGTTGTA TERM 1352 1090356 - 1090383 + T 89 -6.2 -5.40072 | gap 1, overlap 1090357 TTTTATAGGGTTGTA GGCCGGATAAGCG CAG CGCC-ATCCGGCA TTTTTTTACCCCGCG TERM 1353 1090357 - 1090382 + T 79 -9.7 -3.83561 | gap 1, overlap 1090356 TTTATAGGGTTGTAG GCCGGATAAGCG CAG CGCC-ATCCGGC ATTTTTTTACCCCGC CKO_01117 1091567 - 1090389 - | phosphoribosylglycinamide formyltransferase 2 TERM 1354 1091858 - 1091868 + G 77 -8.2 -4.1399 | opp_overlap 1091858 1091856 GATGGAAGACGAACA GCGC GAA GCGC TTTCTCTGTGGCTGG CKO_01118 1091700 - 1091990 + | DNA damage-inducible protein YebG CKO_01119 1092046 - 1092468 + | hypothetical protein CKO_01120 1092562 - 1093221 + | hypothetical protein TERM 1355 1093216 - 1093204 - f 76 -4.7 -4.87626 | CTGCAACAGCAAAAA CAGGC TCT GCCAG GCTAACGTAATCCCC TERM 1356 1093271 - 1093285 + F 75 -10 -3.53012 | GTGCGTGACTTTTGC CACCCT TAT AGGGTG TTTAAAGACAAAAGA TERM 1357 1093382 - 1093409 + G 79 -13.5 -2.7044 | gap 1, overlap 1093380 TCGATAACTATTATT GGCTGCGAGACG ACTCC CG-CTCGCAGCC TGATGTCCTTGACTA TERM 1358 1095068 - 1095054 - g 71 -10 -3.57615 | CGAAGAGTGGGGAAA TCCGCA GGA TGCGGA ATACTACGCGTATAT CKO_01121 1093309 - 1095384 + | protease 2 CKO_01122 1096028 - 1095366 - | exodeoxyribonuclease X TERM 1359 1095489 - 1095479 - G 71 -8.2 -3.89346 | CGGCGACTTCAGAAA CGGC TTT GCCG CGATATTTGCCAAAC CKO_01123 1096780 - 1096052 - | hypothetical protein CKO_01124 1097074 - 1096814 - | DNA polymerase III subunit theta CKO_01125 1097185 - 1097559 + | hypothetical protein TERM 1360 1098339 - 1098329 - g 74 -6.8 -4.2558 | opp_overlap 1098328 1098324 TATGCGGCAGGAAAA TCGC CGC GCGA ATCTCTGGTTTATCT CKO_01126 1097562 - 1098434 + | hypothetical protein CKO_01127 1098451 - 1098789 + | hypothetical protein TERM 1361 1098853 - 1098825 - Tf 91 -6.1 -5.45652 | gap 2, opp_overlap 1098825 ATTTCCAATAAAAAA CCGCAAG--CCTC ATGCA GAGGAACTTGCGG TTTTTTCGTTGTTGC TERM 1362 1098825 - 1098853 + TF 89 -6.1 -5.37865 | gap 2, opp_overlap 1098825 ATTTCCAATAAAAAA CCGCAAG--CCTC ATGCA GAGGAACTTGCGG TTTTTTCGTTGTTGC TERM 1363 1098868 - 1098883 + TF 76 -4.6 -5.00616 | overlap 1098860 1098859 GTTTTTTCGTTGTTG CGGCTG ACAA CGGTCG TTTTTTACCGGCCAC TERM 1364 1099014 - 1099043 + TF 87 -7.3 -5.1634 | gap 1, overlap 1099015 AAGAGCCATTTCCCT G-GACCGAATAC AGGAATC GTATTCGGTCTC TTTTTATCTGTTTGT TERM 1365 1099015 - 1099041 + TF 89 -11 -4.18187 | overlap 1099014 AGAGCCATTTCCCTG GACCGAATAC AGGAATC GTATTCGGTC TCTTTTTATCTGTTT CKO_01131 1099434 - 1099255 - | hypothetical protein CKO_01130 1099243 - 1099347 + | hypothetical protein CKO_01133 1099647 - 1099456 - | hypothetical protein CKO_01132 1099463 - 1099693 + | hypothetical protein TERM 1366 1100015 - 1099971 - TR 80 -6.7 -4.89852 | opp_overlap 1099973 1099974 1099976, overlap 1099976 TTATACTCACAAAAA GATA-AGCAAGCGCCGCATAC GGAGT GTATG-GACGCTTGCTGTATT ATTAGAACTGATAGT TERM 1367 1100009 - 1099976 - TR 95 -12.6 -4.13816 | gap 1, opp_overlap 1099976 1099974 1099973, overlap 1099971 CTCACAAAAAGATAA GCAAGCGCCGCATAC GGAGT GTATG-GACGCTTGC TGTATTATTAGAACT TERM 1368 1099976 - 1100009 + Tr 77 -11.1 -3.26712 | gap 1, opp_overlap 1099971 1099976, overlap 1099974 1099973 CTCACAAAAAGATAA GCAAGCGCCGCATACG GAG TGTATG-GACGCTTGC TGTATTATTAGAACT CKO_01134 1102179 - 1100017 - | bifunctional enterobactin receptor/adhesin protein TERM 1369 1101257 - 1101272 + g 73 -6.1 -4.50976 | overlap 1101254 AACGTCACTTTATTG CGCTC ATAGCG GAGCG TTTTATCATATCCGC CKO_01135 1102310 - 1103014 + | serine/threonine protein phosphatase 1 CKO_01136 1103206 - 1103015 - | hypothetical protein TERM 1370 1103300 - 1103279 - R 81 -8.7 -4.4448 | opp_overlap 1103279 1103282, overlap 1103282 AAAGGGCGAAATAAA TAACCCGTC TGGC GACGGGTTC TTTTTGAGTCAGGCA TERM 1371 1103279 - 1103300 + r 84 -8.7 -4.65895 | opp_overlap 1103279 1103282, overlap 1103282 AAAGGGCGAAATAAA TAACCCGTC TGGC GACGGGTTC TTTTTGAGTCAGGCA TERM 1372 1103282 - 1103297 + r 93 -10.4 -4.44608 | opp_overlap 1103279 1103282, overlap 1103279 GGGCGAAATAAATAA CCCGTC TGGC GACGGG TTCTTTTTGAGTCAG TERM 1373 1103297 - 1103282 - R 90 -10.4 -4.32678 | opp_overlap 1103282 1103279, overlap 1103279 GGGCGAAATAAATAA CCCGTC TGGC GACGGG TTCTTTTTGAGTCAG CKO_01137 1103548 - 1103309 - | hypothetical protein TERM 1374 1103531 - 1103520 - G 74 -7.2 -4.13767 | opp_overlap 1103523 TCGTCGATTTCAAAA GCGC CAAT GCGC ACACTGGTTTTCATC CKO_01138 1105101 - 1103662 - | rRNA (cytosine-C(5)-)-methyltransferase RsmF TERM 1375 1105171 - 1105146 - R 95 -12.5 -3.9712 | overlap 1105127 1105147 GCAGTGTAGCATAAA TGCTCCGGCGC GAGC ACGCCGGAGCG GGGGAGTTAACGTGG TERM 1376 1105170 - 1105147 - R 93 -16 -2.97951 | overlap 1105127 1105146 CAGTGTAGCATAAAT GCTCCGGCGC GAGC ACGCCGGAGC GGGGGAGTTAACGTG CKO_01139 1107811 - 1105178 - | hypothetical protein TERM 1377 1106888 - 1106929 + gr 93 -13.7 -3.54424 | TAATTTGGTGAGCTC GCCCACTTCAAGCCCCTGA TACA TCAGCGGCGTGGAGTCGGC TTTCAGGCCGTCGCC CKO_01140 1108958 - 1107780 - | hypothetical protein TERM 1378 1108331 - 1108315 - GH 70 -9.3 -3.4678 | AGCGGGATATGACAA CGGGGGC AAC GTCCCCG TGAGTCAGGATAACC TERM 1379 1109121 - 1109145 + H 72 -6.6 -4.27617 | opp_overlap 1109132, overlap 1109141 TGACGGGAATGATCT TGAGCATTAA CGCAT TTAATGCTTA TTTTAATAGGCTGTA CKO_01141 1109193 - 1109690 + | hypothetical protein TERM 1380 1109718 - 1109737 + F 81 -12.2 -3.1552 | overlap 1109716 GTAGCAATTACTGAT GGCGTCAT TATA ATGACGCC TGTTCATGCCTGCGG TERM 1381 1110196 - 1110184 - g 75 -6.9 -4.42748 | overlap 1110181 1110186 GCAGGCGAAAAAGAA GACGC TCC GCGCC GTGAGCGTAAACCGC CKO_01142 1109788 - 1110474 + | putative solute/DNA competence effector TERM 1382 1110619 - 1110609 - g 74 -6.8 -4.3255 | TTCTGAAGGAAGAAA CGCA GCA TGCG ACCGTGAGTGAGCGC CKO_01143 1110494 - 1112542 + | carboxy-terminal protease TERM 1383 1112550 - 1112571 + F 100 -13.1 -5.40072 | opp_overlap 1112552 1112564 GCAAATAGCGTCAAG CAGGCACAA GAAA TTGTGCCTG TTTTTTTAACAAGCG TERM 1384 1112694 - 1112704 + F 80 -6.8 -4.72029 | opp_overlap 1112677 ATACGATGTGGGTAT CGCA TAG TGCG TTTTGTTAAGTTGAG CKO_01144 1112734 - 1113615 + | heat shock protein HtpX TERM 1385 1113642 - 1113659 + T 100 -11.3 -6.06723 | opp_overlap 1113642 TGGCATTCTAAAAAA GCGCATC AGAT GATGCGC TTTTTTTTTACGCCA TERM 1386 1113659 - 1113642 - T 100 -11.3 -5.0538 | opp_overlap 1113642 TGGCATTCTAAAAAA GCGCATC AGAT GATGCGC TTTTTTTTTACGCCA CKO_01145 1115040 - 1113667 - | hypothetical protein TERM 1387 1114495 - 1114475 - G 74 -7.5 -4.15044 | TTTGGGGGTAAGAAA CGCATAGCC AAC AGCAATGCG ATAATGCCTAACGGA TERM 1388 1114718 - 1114696 - G 77 -11.2 -3.53012 | opp_overlap 1114700 1114703 CGCGGCGCCGCCAAA CCCCTGCGCG ACG CGCGCAAGCG TCAGCATTTCCAGGG CKO_01147 1115244 - 1115071 - | hypothetical protein CKO_01146 1115218 - 1116009 + | hypothetical protein TERM 1389 1116063 - 1116037 - TR 81 -12.3 -3.29511 | opp_overlap 1116037 CTGAGCCGTTCAGAA GCCAGCCGGTA GAAGA TACCTGCTGGC TTTTTTATTGCCCTG TERM 1390 1116037 - 1116063 + Tr 100 -12.3 -5.46657 | opp_overlap 1116037 CTGAGCCGTTCAGAA GCCAGCCGGTA GAAGA TACCTGCTGGC TTTTTTATTGCCCTG TERM 1391 1116144 - 1116126 - TR 100 -11.8 -4.79667 | opp_overlap 1116126 1116123 1116121 AAAACGCATTAAAAA GGCATAAC CAC GTTATGCC TGATATTTATGCAGA TERM 1392 1116126 - 1116144 + Tr 77 -11.8 -2.89797 | opp_overlap 1116126, overlap 1116123 1116121 AAAACGCATTAAAAA GGCATAAC CAC GTTATGCC TGATATTTATGCAGA CKO_01148 1116470 - 1116180 - | hypothetical protein CKO_01150 1116727 - 1116515 - | hypothetical protein CKO_01149 1116560 - 1116721 + | hypothetical protein CKO_01151 1116796 - 1117083 + | hypothetical protein TERM 1393 1117097 - 1117141 + TF 70 -5.1 -4.4773 | gap 2, opp_overlap 1117097 AACGACAAGCAGAGA CAGGATGCGCGTCTGCCAG CCATTCCTT CAGGCAGGC-C-CATCCTG TTTTCATTAATGTAA CKO_01153 1118148 - 1117861 - | hypothetical protein CKO_01152 1117903 - 1118112 + | cold shock-like protein CspC TERM 1394 1118089 - 1118105 + gF 70 -9.5 -2.94099 | overlap 1118069 CAGAAAGGTCCGGCT GCTGTTA ACG TAACAGC TATCTGATCGACACC TERM 1395 1118179 - 1118162 - fH 76 -8.3 -4.13648 | opp_overlap 1118162 AACCTCAGATATAAA GCCTCGC CAGT GCGGGGC TTTTTAATTCAGGTT TERM 1396 1118162 - 1118179 + FH 100 -10.5 -4.87893 | opp_overlap 1118162 AACCTCAGATATAAA GCCTCGC CAGT GCGGGGC TTTTTAATTCAGGTT TERM 1397 1118238 - 1118262 + FH 72 -4.9 -4.64657 | opp_overlap 1118242, overlap 1118225 GTTAGCGCTTTGTTG CAAAGCCGCGA TGT TCGTAGCATTG TTTTTCCCGCTTTCC TERM 1398 1118359 - 1118345 - g 78 -2.1 -5.27023 | gap 1, opp_overlap 1118346, overlap 1118346 AGGTGAAAAAGAAAA GCGACG GCGC CGT-GC GTAATTTTGCTCCCA CKO_01154 1118332 - 1120077 + | hypothetical protein TERM 1399 1120879 - 1120899 + G 73 -8.9 -3.90112 | CCTGACGTATGGGAG CGGCTGGCG GCT TGCCAGCAG TTTGATTGCCAGACG CKO_01155 1120141 - 1120950 + | 23S rRNA methyltransferase A CKO_01156 1121513 - 1120947 - | hypothetical protein CKO_01157 1121589 - 1121443 - | hypothetical protein TERM 1400 1121791 - 1121817 + r 74 -8.2 -4.00868 | AAATATTATTTGACT TCTAATTGAAAA CGA TTTTCATTTAGA TTTAATTATCAATAA TERM 1401 1121868 - 1121883 + r 86 -4 -5.52384 | opp_overlap 1121870, overlap 1121870 ATCAGGCGGGATGAA TATAGC CTTA GCTATG TTTTTTTGATCGCGA CKO_01158 1122393 - 1121935 - | hypothetical protein TERM 1402 1122382 - 1122366 - G 85 -4.3 -5.19328 | ACGCGACAATAAAAA GAACCAG CAC CAGGTCC GTGACAGTCATTAAT TERM 1403 1122433 - 1122414 - R 100 -16.4 -5.71712 | opp_overlap 1122414 CTCCAGATAAAAAAA CCGGGGCC AAAG GGCCCCGG TAGTGTACAACAGAA TERM 1404 1122414 - 1122433 + r 95 -16.4 -2.62184 | opp_overlap 1122414 CTCCAGATAAAAAAA CCGGGGCC AAAG GGCCCCGG TAGTGTACAACAGAA CKO_01159 1123300 - 1122449 - | mannose-specific PTS system protein IID TERM 1405 1123010 - 1123024 + g 75 -12.8 -2.64872 | overlap 1123009 1123007 ACCATCGTCGATCTC CGCGCC GTT GGCGCG CTGTTCTTCCATCGC TERM 1406 1123254 - 1123264 + g 79 -3.2 -5.28778 | opp_overlap 1123251, overlap 1123251 ACGCCACGAATATCA CTCG GAG TGAG TTTTTTCTCAGTGGT CKO_01160 1124113 - 1123313 - | hypothetical protein CKO_01161 1125137 - 1124172 - | hypothetical protein TERM 1407 1124695 - 1124729 + g 75 -6.3 -4.58685 | gap 1, overlap 1124684 1124686 1124696 1124721 1124726 GGTTTAGCGGGCGCC GCCGCTTTTGGCGCAG CAAC CGGCGCC-GGAGCGGG TTTTTCAACCGGTTT TERM 1408 1124696 - 1124728 + g 70 -9.8 -3.34488 | gap 1, overlap 1124684 1124686 1124695 1124721 1124726 GTTTAGCGGGCGCCG CCGCTTTTGGCGCAG CAAC CGGCGCC-GGAGCGG GTTTTTCAACCGGTT TERM 1409 1125066 - 1125079 + g 70 -6.7 -4.20084 | TTCCTGCTCGCCTAA CAGCA TTTC TGCTG TTTTAAGTAACTGCT CKO_01162 1125179 - 1125331 + | hypothetical protein CKO_01163 1125581 - 1127140 + | hypothetical protein TERM 1410 1127208 - 1127176 - T 95 -13.5 -3.93288 | opp_overlap 1127184 CGGGATCTAACGAAA CGGCATAACGGGC GTCATGT GTCCGTTATGCCG GGCGGGCGGCGGTGC CKO_01164 1128765 - 1127167 - | hypothetical protein TERM 1411 1127761 - 1127732 - GT 77 -3.5 -5.03314 | TTCATCGGGAAAAAA TGCCGCTGCCGAA TGGT TTCCGCAATGACA TAGCGGGTAAGGGGA CKO_01165 1128868 - 1128740 - | hypothetical protein TERM 1412 1128886 - 1128860 - G 100 -12.4 -4.9218 | GATTGATGAGAAAAA TTCGCCCATC AGTGGGA GATGGGCGAA GTGGCAGGCTATGTT CKO_01166 1130326 - 1128905 - | hypothetical protein TERM 1413 1129435 - 1129445 + g 95 -8.2 -4.84642 | opp_overlap 1129431 CCGTAACGACACGCC CGCC CGC GGCG TTTTCTTCGTTTACC CKO_01167 1131032 - 1130454 - | hypothetical protein TERM 1414 1130726 - 1130707 - G 77 -8.6 -4.19238 | gap 1 GGCGTAACCTGAAAA CCCGT-GAC GCT GTCTACGGG CGGCAGCACGCCAAT CKO_01168 1132397 - 1131036 - | hypothetical protein TERM 1415 1131686 - 1131669 - G 73 -5.5 -4.59773 | opp_overlap 1131671, overlap 1131671 CTCCAGGCGCAAAAA CGCGC TGAACGGG GCGCG GTTAGCGTGATTAAG TERM 1416 1132290 - 1132264 - G 73 -5.8 -4.47259 | ACCAGAATATCAAAA CGATTATGCGGA TGT TCAGCATGACCG GAATGCAGCAGCATG CKO_01169 1132470 - 1132649 + | hypothetical protein CKO_01171 1133001 - 1132657 - | hypothetical protein TERM 1417 1132835 - 1132845 + gF 71 -4.6 -4.56597 | AGAATACGTGACTTA CGGG TGC CCTG TTTTTCCAGCGCCGC CKO_01170 1132940 - 1133083 + | hypothetical protein TERM 1418 1133703 - 1133691 - g 75 -6.2 -4.60924 | TAAAGCGCGTAAAAA GGCG ATGGA CGCC GATGTGGTTATCGTC CKO_01172 1133131 - 1135041 + | hypothetical protein CKO_01173 1135099 - 1135794 + | hypothetical protein CKO_01174 1135894 - 1136475 + | hypothetical protein TERM 1419 1136521 - 1136497 - T 100 -14.4 -4.30576 | opp_overlap 1136497 1136501, overlap 1136501 GTTTTATCAGTAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTAATACGGAC TERM 1420 1136497 - 1136521 + T 86 -14.4 -2.56596 | opp_overlap 1136497 1136501, overlap 1136501 GTTTTATCAGTAAAA GAAACAGCGG CTGGT CCGCTGTTTC TGCATTAATACGGAC TERM 1421 1136501 - 1136517 + T 77 -9.4 -3.98826 | opp_overlap 1136501 1136497, overlap 1136497 TATCAGTAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTAATAC TERM 1422 1136517 - 1136501 - T 93 -9.4 -4.73614 | opp_overlap 1136497 1136501, overlap 1136497 TATCAGTAAAAGAAA CAGCGG CTGGT CCGCTG TTTCTGCATTAATAC CKO_01175 1136660 - 1136526 - | hypothetical protein TERM 1423 1136913 - 1136899 - H 80 -5.6 -5.00616 | overlap 1136900 CTGGGCCTCAAAAAA GGCGAC CGC GTCGCG CTAATGATGCCGAAT TERM 1424 1136912 - 1136900 - H 72 -9.1 -3.60048 | overlap 1136899 TGGGCCTCAAAAAAG GCGAC CGC GTCGC GCTAATGATGCCGAA TERM 1425 1137651 - 1137631 - H 81 -8.3 -4.44667 | opp_overlap 1137634 1137635 TTGCTGAACAACAAA GAATTCCAG CAA CTGGACTTC TCTACGCTGCACCTT TERM 1426 1138386 - 1138402 + H 100 -11.5 -5.75342 | AAGCAAGTCGCCAGA CGCCGGT TAA GCCGGCG TTTTTTTTGGCGCAA CKO_01177 1138447 - 1139562 + | ribonuclease D CKO_01178 1140679 - 1139597 - | hypothetical protein CKO_01179 1140783 - 1141700 + | hypothetical protein TERM 1427 1141762 - 1141737 - T 76 -9.1 -3.81951 | opp_overlap 1141742, overlap 1141732 1141742 TGGCACAGCAGCAAA TAAAAGGCAGA ATAC TCTGCCTTTTT ATCGCGTTGCGTTAT TERM 1428 1141742 - 1141757 + T 93 -9 -4.87786 | opp_overlap 1141737 1141732 1141742 CAGCAGCAAATAAAA GGCAGA ATAC TCTGCC TTTTTATCGCGTTGC TERM 1429 1141757 - 1141742 - T 100 -9 -4.95484 | opp_overlap 1141742, overlap 1141737 1141732 CAGCAGCAAATAAAA GGCAGA ATAC TCTGCC TTTTTATCGCGTTGC CKO_01180 1142055 - 1141789 - | cell division topological specificity factor MinE TERM 1430 1141978 - 1141946 - G 93 -13.3 -3.91488 | opp_overlap 1141942 1141939 AACTGCGGTAAATAA TGCGGCTCGGCGTCG CTG CGACGGCGCTCCGCA ACAATGATTTGCAGT CKO_01181 1142871 - 1142059 - | cell division inhibitor MinD CKO_01182 1143632 - 1142895 - | septum formation inhibitor CKO_01183 1143638 - 1144021 + | hypothetical protein TERM 1431 1144471 - 1144486 + G 74 -4.6 -4.6971 | AAGGGTTTGATAATT CCTGCC CGCT GTCAGG TTTTATTCCGGTTTC CKO_01184 1144092 - 1144751 + | hypothetical protein CKO_01185 1144829 - 1145290 + | hypothetical protein TERM 1432 1145279 - 1145298 + T 79 -10.7 -3.61517 | TTAAACAAACCTTCA TGGGCGG ACTGAA CCGCCCA TTGTTCAGCAAGCGT TERM 1433 1145310 - 1145322 + T 78 -4.8 -5.06451 | opp_overlap 1145310 CCCATTGTTCAGCAA GCGT TAATT ACGC TTTTTTCGCCTGATA CKO_01186 1145658 - 1145317 - | hypothetical protein TERM 1434 1145747 - 1145762 + r 83 -10.4 -3.75824 | opp_overlap 1145747 TCAGGCGAAAAAAAA CGCTCC CGAA GGAGCG TTCTGTTATCGACTA TERM 1435 1145762 - 1145747 - R 100 -10.4 -5.78622 | opp_overlap 1145747 TCAGGCGAAAAAAAA CGCTCC CGAA GGAGCG TTCTGTTATCGACTA CKO_01187 1146247 - 1145768 - | disulfide bond formation protein B TERM 1436 1145918 - 1145891 - G 87 -8.4 -4.59773 | gap 1, overlap 1145895 CTCCAGGGTTAAAAA CGACCACTGACGC TCG GCG-CAGTCGCCG GAAGCCAGGAAGACC TERM 1437 1146406 - 1146439 + r 85 -12.5 -3.32343 | opp_overlap 1146407 1146408, overlap 1146408 1146413 AATTATCATGCAAAA AGTCAAACCGGGCAG TGAT TTGCCCGGTTTGATG TTATGAGAATGTAGC TERM 1438 1146438 - 1146407 - R 100 -13.1 -4.68994 | opp_overlap 1146406 1146408 1146413, overlap 1146408 ATTATCATGCAAAAA GTCAAACCGGGCA GTGATT TGCCCGGTTTGAT GTTATGAGAATGTAG TERM 1439 1146437 - 1146408 - R 100 -16.6 -3.40674 | opp_overlap 1146406 1146408 1146413, overlap 1146407 TTATCATGCAAAAAG TCAAACCGGGCA GTGATT TGCCCGGTTTGA TGTTATGAGAATGTA TERM 1440 1146408 - 1146437 + r 100 -17.3 -3.22951 | opp_overlap 1146408 1146407, overlap 1146406 1146413 TTATCATGCAAAAAG TCAAACCGGGCAG TGAT TTGCCCGGTTTGA TGTTATGAGAATGTA TERM 1441 1146413 - 1146432 + r 87 -11.4 -3.97088 | opp_overlap 1146408 1146407, overlap 1146408 1146406 ATGCAAAAAGTCAAA CCGGGCAG TGAT TTGCCCGG TTTGATGTTATGAGA CKO_01188 1147984 - 1146440 - | sodium/proton antiporter CKO_01189 1148147 - 1148926 + | fatty acid metabolism regulator TERM 1442 1148985 - 1148998 + F 71 -9.5 -3.23274 | GTGTGCTGTTTGTTC GCGCC GGAT GGCGC TTCGCTTATCCGGCC TERM 1443 1149189 - 1149202 + G 91 -9.5 -4.67607 | GTGTGCTGTTTGTTT GCGCC GGAT GGCGC TTTGTTTATTCGGCC CKO_01190 1149132 - 1149239 + | hypothetical protein CKO_01191 1150852 - 1149278 - | hypothetical protein CKO_01192 1150947 - 1150789 - | hypothetical protein TERM 1444 1150921 - 1150957 + gH 70 -4.9 -4.4767 | overlap 1150923 1150924 TTCTTTGCGATTTCG CAGCGCCGGCACGCCAG AAA CTGGCATGGCTGCGATA TTTTATGCTGGATAA TERM 1445 1150923 - 1150955 + gH 71 -7.5 -3.84585 | overlap 1150921 1150924 CTTTGCGATTTCGCA GCGCCGGCACGCCAG AAA CTGGCATGGCTGCGA TATTTTATGCTGGAT TERM 1446 1150924 - 1150954 + gH 74 -11 -2.90028 | overlap 1150923 1150921 TTTGCGATTTCGCAG CGCCGGCACGCCAG AAA CTGGCATGGCTGCG ATATTTTATGCTGGA CKO_01193 1151133 - 1152431 + | D-amino acid dehydrogenase small subunit TERM 1447 1152981 - 1152970 - g 71 -5.8 -4.30844 | opp_overlap 1152972, overlap 1152971 1152972 AGGCGATGACGAAAA TCGC CCAT GCGA CGGAAGGGCTTGAAT CKO_01194 1152444 - 1153514 + | alanine racemase TERM 1448 1153524 - 1153542 + TF 80 -12.4 -2.96274 | GCGTAACTTTTTTGT GGCGCCGT AGG ATGGCGCC TGTGCTTATCCGGCC CKO_01196 1155227 - 1153620 - | potassium/proton antiporter TERM 1449 1153898 - 1153861 - Gf 76 -4.7 -4.77165 | gap 1, overlap 1153872 GCTTCGAGAATAAAA TCGCCG-AAAAAGCGCTG ATC CAGCGCGACCGGCGGCGA CTGGCTGAACAGTTT TERM 1450 1153886 - 1153872 - Gf 95 -11.4 -4.61527 | overlap 1153861 AAAATCGCCGAAAAA GCGCTG ATC CAGCGC GACCGGCGGCGACTG TERM 1451 1154894 - 1154908 + gF 73 -11.4 -2.60571 | overlap 1154893 CGGATTCGATTTCCA GCGTCG AAC CGACGC GTTCGTTAAGCCCTT CKO_01195 1155226 - 1155399 + | hypothetical protein CKO_01197 1156364 - 1155450 - | L,D-carboxypeptidase A TERM 1452 1156801 - 1156791 - g 74 -4.6 -4.75174 | CAGCGAACTGAAAAA CCCG GAG CGGA ATATCTCGATGGGGA CKO_01198 1156465 - 1157076 + | hypothetical protein CKO_01199 1157823 - 1157089 - | hypothetical protein TERM 1453 1157155 - 1157213 + g 72 -11.8 -2.78025 | AATAATCCGCTGTAA TTCCCGCTCCACCGCC-GGGCTGACGTT GAGAA AACGAAAGCTCAGGCGG-GGAGTGGTAA TCGTCTCATTTTTAC TERM 1454 1157979 - 1157999 + rH 70 -9.7 -2.94144 | opp_overlap 1157977, overlap 1157976 TATACTTAAGGGACT GGCGCAAGA ACG TCTTGCGCA TGCTTTCACTGGAAA CKO_01201 1158435 - 1158202 - | hypothetical protein CKO_01200 1158027 - 1158281 + | hypothetical protein TERM 1455 1158392 - 1158420 + gF 75 -9.6 -3.55622 | gap 1 ATTATCAGTCGTGAA CGTGTCAGGGGAG GCGT CTTCCC-GGCACG TTTACGGGGATTCAA CKO_01202 1158558 - 1160672 + | hypothetical protein TERM 1456 1160676 - 1160708 + T 100 -15.7 -4.4078 | gap 1, opp_overlap 1160679, overlap 1160679 TACAGCTTCTGATAG C-AACCCGGCCTGC AATTGC GCAGGCCGGGTTCG TTTTCATTCGGCGGA TERM 1457 1160679 - 1160704 + T 100 -17.6 -3.75718 | opp_overlap 1160679, overlap 1160676 AGCTTCTGATAGCAA CCCGGCCTGC AATTGC GCAGGCCGGG TTCGTTTTCATTCGG TERM 1458 1160704 - 1160679 - T 100 -18.3 -3.25942 | opp_overlap 1160679 1160676 AGCTTCTGATAGCAA CCCGGCCTGCA ATTG CGCAGGCCGGG TTCGTTTTCATTCGG CKO_01203 1162698 - 1160728 - | hypothetical protein TERM 1459 1161011 - 1161026 + g 70 -9 -3.74747 | opp_overlap 1161011 GTCTGCGTTGGCAAA TCGGTG ATTT CACCGA TTTCATCACGCTTGA CKO_01204 1163579 - 1162722 - | molybdenum transport protein ModD TERM 1460 1162841 - 1162825 - G 81 -12.3 -3.51365 | opp_overlap 1162824, overlap 1162815 CCACAGTCGAGATAA CTCGCCA GAG TGGCGAG GTTGATGCCGCCAGT CKO_01205 1164388 - 1163576 - | hypothetical protein TERM 1461 1163652 - 1163614 - G 72 -12.3 -2.78384 | gap 1, opp_overlap 1163607, overlap 1163617 TGCTGTCCCACCAGA TCAGCGCCC-AGTCCCGG CTGG CCGGGGCAAGGGCGCTGG CATCCTGCTGTTGAT TERM 1462 1163649 - 1163617 - G 75 -12.6 -2.66316 | gap 1, opp_overlap 1163607, overlap 1163614 TGTCCCACCAGATCA GCGCCC-AGTCCCGG CTGG CCGGGGCAAGGGCGC TGGCATCCTGCTGTT TERM 1463 1164290 - 1164315 + g 81 -3.9 -5.1848 | overlap 1164291 TTCTGCCATTTTCTC TGCCCGTTTAT CCCA ATGGTCGGGCG TTTTTTCCGTTCGTT CKO_01206 1165156 - 1164398 - | hypothetical protein TERM 1464 1164549 - 1164594 + g 85 -2.4 -5.50499 | overlap 1164551 CTGTCGGCTATCGCC CTGGCATGGAGCGGATGATG GGTTGA CATCAGTAGCGCCATCCCCG TTTTTTTCAGTGTCA CKO_01207 1166139 - 1165153 - | hypothetical protein CKO_01208 1167170 - 1166139 - | hypothetical protein TERM 1465 1166654 - 1166640 - G 75 -11.4 -3.33696 | overlap 1166619 CGCTTGCGCAATGAA GCGCTG AGC CAGCGC CGCCTGAGCGGCAGT TERM 1466 1167336 - 1167319 - R 100 -8.4 -5.1356 | opp_overlap 1167319, overlap 1167313 TGCCAGGAAGAAAAA TCCGCG ACGGCG CGCGGA TTTTTGTCAGCATGA TERM 1467 1167319 - 1167336 + r 88 -8.4 -4.84359 | opp_overlap 1167313 1167319 TGCCAGGAAGAAAAA TCCGCG ACGGCG CGCGGA TTTTTGTCAGCATGA CKO_01209 1169077 - 1167365 - | trehalase TERM 1468 1167785 - 1167814 + g 77 -11.4 -3.53343 | overlap 1167789 CAACAGGTGCGCCTG GGTCGCGGCAGC CACTTT GCTGGCGCGATC TTTCGCCGCCGCGTT TERM 1469 1168006 - 1168023 + g 93 -11.3 -4.45577 | CATCGCCTGCCGCTT TGCTGGC GCGC GCCAGCA TTTTCTCCAGTTTAT CKO_01210 1170698 - 1169265 - | dihydroxyacetone kinase subunit M TERM 1470 1169764 - 1169744 - G 80 -4.5 -5.0133 | opp_overlap 1169744 1169745, overlap 1169745 GATGCCCGGAAAAAA TCGCCGCCA GAT CGGCGGAGT ATTTATCTTCCGCCA TERM 1471 1169926 - 1169906 - G 73 -10.3 -3.33348 | opp_overlap 1169909, overlap 1169904 GGGAATAGCAGAACA CCACGCCGG AGA CCCGCGCGG GGAGCTGACGCGCCG CKO_01211 1171341 - 1170709 - | dihydroxyacetone kinase ADP-binding subunit TERM 1472 1171166 - 1171185 + g 87 -8.6 -4.58685 | ATGAAGCCGATGTCT TTATCCGC AATC GCGGGTAA TTTTTCGACGACTTT CKO_01212 1172438 - 1171353 - | dihydroxyacetone kinase subunit DhaK CKO_01213 1173298 - 1172666 - | hypothetical protein CKO_01214 1174048 - 1173371 - | hypothetical protein TERM 1473 1174146 - 1174131 - RH 71 -7.6 -3.84808 | GTGAATCCAGAACAA GGTGTA AAAT TACACC AAAAAATCACTTGAG CKO_01217 1174454 - 1174203 - | hypothetical protein CKO_01215 1174248 - 1174376 + | hypothetical protein TERM 1474 1174603 - 1174586 - gH 72 -5.5 -4.386 | overlap 1174588 GAAGTGTCTATAAAA CAGCGTT TACC AACGCAG GGGATGAAGCGTCAA CKO_01216 1174408 - 1174941 + | hypothetical protein TERM 1475 1175188 - 1175200 + G 77 -4.7 -4.89477 | overlap 1175189 CGCAAAATGACGGTA AGGGC AAA GCCCC TTTTATTATTACACC TERM 1476 1175527 - 1175512 - g 71 -7.6 -3.93369 | TTAATTTCAATGAAA TTACCG TATC CGGTAA GAAAGTTGACAATGT CKO_01218 1174992 - 1175669 + | hypothetical protein TERM 1477 1177356 - 1177317 - g 70 -2.8 -4.72986 | gap 1, overlap 1177344 1177348 GACGCTGAGTAAAAA CGGCAGCGG-CGATCGTTA TGA TAAAGACCAACAGCTGGCG CTGAATATCAGCATT CKO_01219 1175695 - 1178181 + | hypothetical protein TERM 1478 1178401 - 1178418 + G 71 -10.5 -3.17622 | overlap 1178399 1178398 1178413 1178416 CCAAACTGTTGGTCA CGGCGCC TGGC GGTGCCG TCTATTGTAACGGTG TERM 1479 1178525 - 1178536 + G 73 -5.8 -4.46926 | AATCAGGCTATCCAT TCCC GCAG GGGA TTTTGTGCTGCCATC TERM 1480 1178655 - 1178680 + G 75 -6.9 -4.41241 | GGAGTGATTACACAG GGATGGTTTGG TACG CCGAATCATTC TTTTATGCAGATTTC CKO_01220 1178211 - 1179143 + | hypothetical protein TERM 1481 1179314 - 1179300 - g 71 -5.7 -4.32436 | ACAGCATCACTAAAA CCGTT GATTT AACGG CGGGGAGTCCGGTAA CKO_01221 1179158 - 1179676 + | hypothetical protein CKO_01222 1179700 - 1180353 + | hypothetical protein CKO_01223 1181290 - 1180385 - | hypothetical protein TERM 1482 1181483 - 1181449 - g 77 -4.4 -4.85782 | overlap 1181450 TGGCTGAAAAATAAA TCCCCTTATTCA GCAGAACGTCA TGAATAAGGGGC GAATTTTACAGCGCG CKO_01224 1181314 - 1181478 + | hypothetical protein CKO_01225 1183777 - 1181489 - | hypothetical protein TERM 1483 1182139 - 1182151 + g 71 -4.7 -4.54727 | opp_overlap 1182140, overlap 1182140 GCTCCGAACGCAATA ACGGC GAC GCCGG TTTTAGTTTGCCGGA CKO_01226 1184137 - 1184012 - | hypothetical protein CKO_01227 1184339 - 1185745 + | hypothetical protein CKO_01228 1185747 - 1186757 + | hypothetical protein CKO_01230 1186845 - 1186732 - | hypothetical protein CKO_01231 1186933 - 1186769 - | hypothetical protein CKO_01229 1186757 - 1186930 + | hypothetical protein TERM 1484 1186948 - 1186978 + FH 85 -12.6 -3.32023 | overlap 1186948 1186949 CGTCTTACTTCCTGT CTCAGGCCACATCA GCG TGATGTGGCCTGCC TGTTCGTTGTCTCCC TERM 1485 1186949 - 1186977 + FH 90 -16.1 -2.58731 | overlap 1186948 1186948 GTCTTACTTCCTGTC TCAGGCCACATCA GCG TGATGTGGCCTGC CTGTTCGTTGTCTCC CKO_01232 1187004 - 1187990 + | molybdenum cofactor biosynthesis protein A CKO_01233 1188821 - 1188003 - | hypothetical protein CKO_01234 1189285 - 1190325 + | hypothetical protein TERM 1486 1190333 - 1190358 + T 86 -11.2 -3.72051 | gap 1, opp_overlap 1190327 1190326 TTGTATAATTGCTCA GGGCGGGA-CA GGGGA TGCTCCCGCCC TTTGCGCTTATTCAA CKO_01235 1191343 - 1190366 - | hypothetical protein CKO_01236 1192353 - 1191400 - | hypothetical protein TERM 1487 1191903 - 1191886 - G 74 -6.9 -4.36914 | overlap 1191887 CCCCGGCCCATAAAA CTCGGGC GCGC GCCCGAT AAGCACAGGGATGTC TERM 1488 1191902 - 1191887 - G 71 -10.4 -3.21934 | overlap 1191886 CCCGGCCCATAAAAC TCGGGC GCGC GCCCGA TAAGCACAGGGATGT TERM 1489 1192081 - 1192093 + g 70 -6.9 -4.11484 | CCCCACTGTCCGACA CGCGT TCA GCGCG TTTTGCAGCATTACC TERM 1490 1192390 - 1192401 + H 80 -7.2 -4.61231 | TCAGATGGGTGTCCC GGCC CATT GGCC TTTTTCAAAGTATAA CKO_01237 1192603 - 1193394 + | hypothetical protein CKO_01238 1193569 - 1194093 + | hypothetical protein CKO_01239 1194489 - 1194827 + | hypothetical protein CKO_01241 1195230 - 1195060 - | hypothetical protein CKO_01240 1195130 - 1195843 + | hypothetical protein TERM 1491 1195885 - 1195838 - fH 76 -9.2 -3.69338 | opp_overlap 1195852, overlap 1195844 1195846 1195847 1195849 1195852 1195884 AAGGAAGGCGAAGAA CAGTAATACCAGAAGCCCACAT TCGC ATGTGGGCTTCTGTAAACATTG GCACAACCACGGCGT TERM 1492 1195878 - 1195844 - fH 100 -15.3 -3.46509 | gap 1, opp_overlap 1195852, overlap 1195838 1195846 1195847 1195849 1195852 GGCGAAGAACAGTAA TACCAGAAGCCCACAT TCGC ATGTGGGCTTCT-GTA AACATTGGCACAACC TERM 1493 1195877 - 1195846 - fH 100 -16 -3.29958 | opp_overlap 1195852, overlap 1195844 1195838 1195847 1195849 1195852 CGAAGAACAGTAATA CCAGAAGCCCACAT TCGC ATGTGGGCTTCTGT AAACATTGGCACAAC TERM 1494 1195876 - 1195847 - fH 100 -19.5 -2.57252 | opp_overlap 1195852, overlap 1195846 1195844 1195838 1195849 1195852 GAAGAACAGTAATAC CAGAAGCCCACAT TCGC ATGTGGGCTTCTG TAAACATTGGCACAA TERM 1495 1195874 - 1195849 - fH 93 -16.3 -2.81181 | opp_overlap 1195852, overlap 1195847 1195846 1195844 1195838 1195852 AGAACAGTAATACCA GAAGCCCACAT TCGC ATGTGGGCTTC TGTAAACATTGGCAC TERM 1496 1195852 - 1195871 + FH 88 -12.2 -3.50447 | opp_overlap 1195849 1195847 1195846 1195844 1195838 1195852 ACAGTAATACCAGAA GCCCACAT TCGC ATGTGGGC TTCTGTAAACATTGG TERM 1497 1195871 - 1195852 - fH 88 -12.2 -3.53933 | opp_overlap 1195852, overlap 1195849 1195847 1195846 1195844 1195838 ACAGTAATACCAGAA GCCCACAT TCGC ATGTGGGC TTCTGTAAACATTGG CKO_01242 1196191 - 1196652 + | hypothetical protein TERM 1498 1196758 - 1196735 - T 74 -11 -2.7814 | overlap 1196721 1196719 1196734 AGCCAGATTTGAAAC TGGCAGCTCA AGTC TGAGCTGCCC TGGGCGGGATAAGCG TERM 1499 1196777 - 1196801 + T 100 -20.1 -4.42062 | opp_overlap 1196771 1196772 GCGGGATAAGCGCAT CAGGGATGCCG TGA CGGCATCCCTG TTTATTTAAAGGATC CKO_01243 1198836 - 1196815 - | hypothetical protein TERM 1500 1198635 - 1198654 + g 75 -12.8 -2.60244 | overlap 1198631 CTCTGGGGAGTTTGT CGCTGGCG GTGA CGCCGGCG TCGCTTAATTCCGGC TERM 1501 1198920 - 1198959 + r 86 -11.5 -3.72051 | overlap 1198921 1198924 1198924 ATTTCTAATAGTGGT GCTACCCGAAACGGGTT TATTTC AACCTGTTTCGGGTCGG TTTGCGCTTATTGGA TERM 1502 1198921 - 1198958 + r 93 -15 -2.82749 | overlap 1198920 1198924 1198924 TTTCTAATAGTGGTG CTACCCGAAACGGGTT TATTTC AACCTGTTTCGGGTCG GTTTGCGCTTATTGG TERM 1503 1198924 - 1198934 + r 81 -8.2 -4.43208 | overlap 1198921 1198920 1198924 CTAATAGTGGTGCTA CCCG AAA CGGG TTTATTTCAACCTGT TERM 1504 1198924 - 1198955 + r 90 -15.3 -2.66593 | overlap 1198924 1198921 1198920 CTAATAGTGGTGCTA CCCGAAACGGGTT TATTTC AACCTGTTTCGGG TCGGTTTGCGCTTAT TERM 1505 1198989 - 1199014 + r 91 -6.7 -5.46276 | opp_overlap 1198989, overlap 1198991 ACAGAATGGCGATAA CGGTCGACGGC GAGA GCCGTCAGGCG TTTTTTGTCTATCTT TERM 1506 1198991 - 1199013 + r 71 -7.7 -3.85325 | gap 1, opp_overlap 1198989, overlap 1198989 AGAATGGCGATAACG GTC-GACGGC GAGA GCCGTCAGGC GTTTTTTGTCTATCT CKO_01244 1200544 - 1198967 - | hypothetical protein TERM 1507 1199609 - 1199599 - G 74 -6.8 -4.2349 | overlap 1199576 CCGCCATACCGAAAA CCTG TTG CAGG GTACAGTCAAAGGTG CKO_01245 1201336 - 1200548 - | hypothetical protein CKO_01246 1202448 - 1201348 - | hypothetical protein TERM 1508 1201950 - 1201940 - G 70 -5.4 -4.48713 | GCCAGCAACAACAAA TCCA GCG TGGA GTAGAGCAACTGTCG TERM 1509 1202200 - 1202157 - G 89 -13.9 -3.61715 | gap 1, opp_overlap 1202157 GATGCTCCTGAATAA CGTGTACGCCGCGCGCCAGA AAGTG TCTGGCAAGCTGCGTAC-CG GTTCCTCCGGCGACG CKO_01247 1211936 - 1202445 - | hypothetical protein TERM 1510 1202728 - 1202748 + g 74 -7.5 -4.07885 | overlap 1202729 TTATCGAGCCACGTT TCTGCCGCT TGC AGCGTCAGG TTTTGCGACACCATA TERM 1511 1202838 - 1202848 + g 74 -8.2 -4.0616 | GAAATGTTCGGGCAG CGCC AGA GGCG TTTGTCCTTCGGCTA TERM 1512 1206538 - 1206548 + g 72 -2.4 -4.9725 | overlap 1206539 GCAGGAGGAATGACC GGCG TTG CGGC TTTTTCTGTGGCGCT TERM 1513 1207166 - 1207196 + g 74 -3.2 -4.96848 | gap 1, overlap 1207168 1207178 ATGACTCATCCACGC GCGGCGCCA-GCA GGGCGA TGCGTCGCGCCCC TTTTTCTCTGAGCCA TERM 1514 1209515 - 1209503 - G 77 -4.7 -4.84359 | CCATCTCCAGAAAAA CGCGG GCG CCGAG CTGATGCGCCACCTG TERM 1515 1210340 - 1210366 + g 89 -13.6 -3.64682 | CCCCCGATTTCTCAC CGGCCCAGGCGC TGA GCGCCTCGGCGG TTTCACGGTTTAATG TERM 1516 1210496 - 1210537 + g 91 -7.9 -4.84761 | gap 1, opp_overlap 1210481 1210480, overlap 1210499 1210500 CCGTCGCCAGCCGCC GCAACGCGCTGTCGCT-GGC GGC GCTGAGCAGCAGCGCGGTAC TTTTTCTGCCGCTAT TERM 1517 1210500 - 1210533 + g 72 -11.7 -2.58667 | gap 1, opp_overlap 1210481 1210480, overlap 1210499 1210496 CGCCAGCCGCCGCAA CGCGCTGTCGCT-GGC GGC GCTGAGCAGCAGCGCG GTACTTTTTCTGCCG TERM 1518 1211012 - 1211052 + g 79 -12.5 -2.93073 | overlap 1211020 1211024 TGACTGCCTGTTGCC CTGCGACGGAAGGGGCGGT ATA GCCGACCTTTCTGTTGCCG TCGTTGTTGACCGCG TERM 1519 1212001 - 1211971 - R 77 -10.5 -3.33711 | gap 1, overlap 1211966 GATTCACAAAGTCAA TGGAACGCCAT-GC GTTC GCGATGGCGTTCCG GGGAAAATCAGTTTG CKO_01248 1218131 - 1212024 - | hypothetical protein TERM 1520 1212324 - 1212366 + g 73 -10.5 -3.34398 | gap 1, overlap 1212322 GTGTGGCTGAGATTG CTCAGGGCATACGCGCGGTG AGCG CTCTGCGCAT-TGCCCTGCG TGTTTAACGGGAGGC TERM 1521 1212395 - 1212412 + g 71 -8.3 -3.78775 | GCACCAGCGCGGCGA GCGGCAG TTGC CAGCCGC TTTCATCCTCGGCCA TERM 1522 1212953 - 1212920 - G 71 -9.5 -3.60525 | overlap 1212941 1212944 TCCATGCAGAGAGAA CCGTTGACCACACCG ACAA CAGTACGGCCGACGG GGTGAGATGGGCGTC TERM 1523 1212961 - 1212977 + g 91 -7.2 -5.0133 | opp_overlap 1212944 1212941, overlap 1212962 GCCGACGGGGTGAGA TGGGCG TCAGC CGCCCG TTTTTTCAGCCGATG TERM 1524 1213870 - 1213898 + g 78 -6 -4.70659 | gap 1, opp_overlap 1213872 1213874, overlap 1213873 1213874 ACATTGCCAGTTGAT AAGAGTTGCTGCC AGAG GGCGGCAAC-CTG TTTTTCAATGTCGCC TERM 1525 1213873 - 1213896 + g 76 -8.8 -3.96999 | opp_overlap 1213872 1213874, overlap 1213870 1213874 TTGCCAGTTGATAAG AGTTGCTGCC AGAG GGCGGCAACC TGTTTTTCAATGTCG TERM 1526 1213874 - 1213895 + g 75 -12.3 -2.97476 | opp_overlap 1213872 1213874, overlap 1213873 1213870 TGCCAGTTGATAAGA GTTGCTGCC AGAG GGCGGCAAC CTGTTTTTCAATGTC TERM 1527 1216228 - 1216208 - G 71 -8.2 -3.77241 | overlap 1216196 AAACCGGAACGTAAA CCGCCCCG GCCAG CAGGACGG CCAGAACCGCAACAA TERM 1528 1217057 - 1217047 - G 72 -2.4 -4.86001 | AGCACGGCAGAAAAA CAGG TCG CCAG CGCCATTGTCGGCGT TERM 1529 1218207 - 1218217 + r 84 -8.2 -4.55697 | overlap 1218207 AACAATTGGATGCTA CCCG AAA CGGG TTTATTTATGCCCCT TERM 1530 1218289 - 1218259 - R 100 -21.3 -3.93658 | opp_overlap 1218263 AACAGGCGGAAAGAA CAGAGGCCCGGAT GGGGT ATCCGGGCCTCTG TCAGGGAGGAGTTTA TERM 1531 1218263 - 1218285 + r 93 -15.6 -2.87132 | opp_overlap 1218259 GGCGGAAAGAACAGA GGCCCGGATG GGG TATCCGGGCC TCTGTCAGGGAGGAG CKO_01249 1219281 - 1218322 - | hypothetical protein TERM 1532 1219573 - 1219583 + G 77 -4.6 -4.85599 | GGCATTAACCAGCCT GGGG GCG CTCC TTTTTCTGGCGTGGA CKO_01250 1219538 - 1221250 + | hypothetical protein TERM 1533 1221312 - 1221347 + G 84 -13.4 -3.14881 | gap 1 TCCAGCGTTGGCAGT CAG-GCCAGGATGCTGC GAC GCAGTATGCTGGCGCTG TTGCTGGCGGCATTC TERM 1534 1221855 - 1221823 - g 71 -8.5 -3.86346 | gap 1, overlap 1221824 1221827 CGATGCGGCGACAAA TGCAGACGCTGGGG GAAGCG CACCAGCGTCTG-A GCGGCGATATCGTTG CKO_01251 1221237 - 1223039 + | hypothetical protein CKO_01252 1223032 - 1224312 + | hypothetical protein CKO_01253 1224340 - 1225656 + | salicylate synthase Irp9 CKO_01254 1225776 - 1225633 - | hypothetical protein TERM 1535 1225718 - 1225753 + g 81 -12.8 -3.14931 | opp_overlap 1225727, overlap 1225721 1225727 1225749 1225750 1225752 TGAAGTGCAGCGTTA TGAAAAAAATCCACGC TTTG GCGTGGATTTTTGTTA TTCGTGAAAGGTGAC TERM 1536 1225721 - 1225750 + g 83 -12.3 -3.72027 | opp_overlap 1225727, overlap 1225718 1225727 1225749 AGTGCAGCGTTATGA AAAAAATCCACGC TTTG GCGTGGATTTTTG TTATTCGTGAAAGGT TERM 1537 1225727 - 1225744 + g 100 -11.3 -5.31855 | opp_overlap 1225727, overlap 1225721 1225718 GCGTTATGAAAAAAA TCCACGC TTTG GCGTGGA TTTTTGTTATTCGTG TERM 1538 1225744 - 1225727 - G 100 -11.3 -5.52384 | opp_overlap 1225727 1225721 1225718 GCGTTATGAAAAAAA TCCACGC TTTG GCGTGGA TTTTTGTTATTCGTG CKO_01255 1226877 - 1225960 - | hypothetical protein CKO_01256 1226969 - 1227205 + | hypothetical protein CKO_01257 1227235 - 1228215 + | hypothetical protein TERM 1539 1228393 - 1228428 + T 73 -4 -4.89393 | opp_overlap 1228402, overlap 1228397 1228402 AACGGATACGCTTTA AATAAAAAATCCACGC AATT GCGTGGATTTTATGGG TTTTTGTGGACTTTA TERM 1540 1228397 - 1228424 + T 74 -11.4 -2.88667 | opp_overlap 1228402, overlap 1228393 1228402 GATACGCTTTAAATA AAAAATCCACGC AATT GCGTGGATTTTA TGGGTTTTTGTGGAC TERM 1541 1228402 - 1228419 + T 95 -11.3 -4.56887 | opp_overlap 1228402, overlap 1228397 1228393 GCTTTAAATAAAAAA TCCACGC AATT GCGTGGA TTTTATGGGTTTTTG TERM 1542 1228419 - 1228402 - T 100 -11.3 -5.63517 | opp_overlap 1228402 1228397 1228393 GCTTTAAATAAAAAA TCCACGC AATT GCGTGGA TTTTATGGGTTTTTG CKO_01258 1229566 - 1228475 - | translation-associated GTPase TERM 1543 1228897 - 1228919 + g 74 -7.6 -4.17048 | CTGCATCGGCAATGG CGCGAACCTG ATC CAGGTACGGG TTATTTTCGAAGCCA TERM 1544 1228991 - 1229002 + g 77 -7.2 -4.26463 | opp_overlap 1228991 CAGGAAGCTCAGATA GCGG ATCG CCGC TTTATCTTCGTCTGT CKO_01259 1230267 - 1229683 - | peptidyl-tRNA hydrolase TERM 1545 1230352 - 1230336 - H 75 -2.9 -5.24129 | GCGCTTGACAAAAAA CAGCG TGGATTG CGCCG GAAGCTGAATAATTG CKO_01260 1230543 - 1230821 + | hypothetical protein TERM 1546 1230839 - 1230866 + T 79 -9.9 -3.67498 | opp_overlap 1230842, overlap 1230840 1230842 TATCGCGTCGGTTTA AGACCAGTCAG CTTGGA CTGACTGGTCA TTGTCTTAACCATTC TERM 1547 1230840 - 1230865 + T 82 -13.4 -2.80017 | opp_overlap 1230842, overlap 1230839 1230842 ATCGCGTCGGTTTAA GACCAGTCAG CTTGGA CTGACTGGTC ATTGTCTTAACCATT TERM 1548 1230863 - 1230842 - T 75 -10.9 -3.01712 | opp_overlap 1230840 1230839 1230842 CGCGTCGGTTTAAGA CCAGTCAGC TTGG ACTGACTGG TCATTGTCTTAACCA TERM 1549 1230842 - 1230863 + T 73 -10.2 -2.94293 | opp_overlap 1230842, overlap 1230840 1230839 CGCGTCGGTTTAAGA CCAGTCAG CTTGGA CTGACTGG TCATTGTCTTAACCA CKO_01261 1231690 - 1230872 - | hypothetical protein CKO_01262 1232868 - 1231696 - | hypothetical protein TERM 1550 1232620 - 1232608 - G 82 -5.5 -5.09204 | ACAGGCGAAGAAAAA TAGCG ATG CGCCA ATAGAATGCGCGTTG TERM 1551 1232639 - 1232627 - G 70 -9.1 -3.66288 | GATGCGCCAATAGAA TGCGC GTT GCGCA CCAGTTCGCCGTGTC CKO_01263 1233421 - 1232870 - | hypothetical protein TERM 1552 1233171 - 1233132 - G 70 -5.6 -4.42386 | gap 1, opp_overlap 1233150, overlap 1233136 TGCGGATCGATAAAA CGATGGACATCCGC-CTGC TGC GCTGAGCGAATTTCCTCCG GGGTACGGTGATGAA CKO_01264 1233893 - 1233453 - | hypothetical protein CKO_01265 1234733 - 1233912 - | hypothetical protein CKO_01266 1235797 - 1234730 - | hypothetical protein TERM 1553 1234893 - 1234864 - G 84 -6.4 -5.01535 | overlap 1234866 CGATAATGAGAAAAA TGGCGCCGATCA TGGCGC TGACCGGCAGCA ATCGATGGTGTTGAT TERM 1554 1235573 - 1235551 - G 71 -7.6 -3.98842 | opp_overlap 1235554, overlap 1235555 CACAACAGGCAGAAA CCAACGCCCG CGT CAGGCGATAG TTCCAGATAATGCCC TERM 1555 1235569 - 1235555 - G 70 -9.2 -3.6239 | opp_overlap 1235554, overlap 1235551 ACAGGCAGAAACCAA CGCCCG CGT CAGGCG ATAGTTCCAGATAAT TERM 1556 1235853 - 1235822 - R 82 -13 -2.91728 | ATTCTGAATACCAGA GGCGCGCTATGCCC GGTA AGACATAGCGCGAC ATAAAGATTATTGAG CKO_01267 1236928 - 1235861 - | hypothetical protein TERM 1557 1236262 - 1236272 + g 72 -2.4 -4.91712 | opp_overlap 1236262 TGGAAAACCAGAATA CGGC GGA GACG TTTTTATCCATTCCG TERM 1558 1237378 - 1237396 + r 73 -2.4 -5.1485 | opp_overlap 1237379 1237382, overlap 1237379 GAAAAAAGAACAAAA ACATCATA CTT TATGGTGA TTTTTATATTAATTA CKO_01268 1237508 - 1237353 - | hypothetical protein TERM 1559 1237395 - 1237379 - G 91 -3.7 -5.54403 | opp_overlap 1237379 1237378, overlap 1237382 AAAAAAGAACAAAAA CATCATA CTT TATGGTG ATTTTTATATTAATT CKO_01269 1238096 - 1237536 - | hypothetical protein TERM 1560 1238176 - 1238154 - R 70 -4.9 -4.45083 | overlap 1238157 1238173 1238174 1238175 GCCAGACGCAGAAAA CCAGTTTTC AATAA GAAAACTTG CCGGTCTGTTGAGAT TERM 1561 1238203 - 1238173 - R 100 -12 -4.89477 | gap 1, overlap 1238154 1238174 1238175 1238195 TTTTCAATAAGAAAA CTTGCCGGTCTGT TGAGAT ACAGACCGGCA-G TCGGGATTAGATATC TERM 1562 1238203 - 1238174 - R 88 -12.2 -3.52963 | overlap 1238154 1238173 1238175 1238195 TTTCAATAAGAAAAC TTGCCGGTCTGT TGAGAT ACAGACCGGCAG TCGGGATTAGATATC TERM 1563 1238202 - 1238175 - R 90 -15.7 -2.71055 | overlap 1238154 1238173 1238174 1238195 TTCAATAAGAAAACT TGCCGGTCTGT TGAGAT ACAGACCGGCA GTCGGGATTAGATAT CKO_01270 1239862 - 1238210 - | putative sulfate transporter YchM TERM 1564 1239258 - 1239235 - G 75 -11.6 -3.32268 | TAACCACGGCCATAA CGGCGCAGCC CGCC AGCAGCGCCG GAAGATGGCCCGGCA TERM 1565 1240003 - 1239974 - R 85 -13.7 -2.96296 | opp_overlap 1239982 1239998, overlap 1239982 AATAAGAGTTACAGA CAAAAAAACCCGC CGCA GCGGGTTTTTTAG CCGGGTTCGATTAGT TERM 1566 1239982 - 1239995 + r 100 -9.5 -5.01732 | opp_overlap 1239974 1239982 TTACAGACAAAAAAA CCCGC CGCA GCGGG TTTTTTAGCCGGGTT TERM 1567 1239995 - 1239982 - R 100 -9.5 -5.76633 | opp_overlap 1239982, overlap 1239974 TTACAGACAAAAAAA CCCGC CGCA GCGGG TTTTTTAGCCGGGTT CKO_01271 1240979 - 1240014 - | ribose-phosphate pyrophosphokinase CKO_01272 1241963 - 1241112 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 1568 1241697 - 1241732 + g 76 -12.4 -3.12895 | opp_overlap 1241716, overlap 1241696 1241695 GATGCTGATATCCGC GCCGCTGCCTGCGGGC AAAC GCCCGTGGGCGGACGC TGTCTTCATCAGCAA TERM 1569 1241760 - 1241748 - G 71 -10.5 -3.21099 | TGTCTTCATCAGCAA CCGCG CCG CGCGG ACGATCAGATTGTCG CKO_01273 1242583 - 1241960 - | outer membrane lipoprotein LolB TERM 1570 1242423 - 1242413 - G 74 -8.2 -4.06361 | opp_overlap 1242413, overlap 1242409 GGAGATATAAGCAAA CGCG CCA CGCG TCTGATACTGATTCA TERM 1571 1243155 - 1243127 - g 70 -9.6 -3.44051 | gap 1 CTGGCACCAGGACAA CGACGC-CGTCAG CCAC CTGATGCGCGTCG CCAGCGGGCTGGACT TERM 1572 1243308 - 1243342 + G 84 -9.3 -4.29738 | gap 1, opp_overlap 1243312 AAACGCGTACGCACC GAAACAGACATCGGCG CCAG CGCCG-TGTCCGTTGC TTTTGCTGCCTGTAC TERM 1573 1243338 - 1243312 - g 76 -10.9 -3.6682 | gap 1, opp_overlap 1243308 GCGTACGCACCGAAA CAGACATCGGCG CCAG CGCCG-TGTCCG TTGCTTTTGCTGCCT CKO_01274 1242846 - 1244102 + | glutamyl-tRNA reductase CKO_01275 1244143 - 1245225 + | peptide chain release factor 1 TERM 1574 1245806 - 1245823 + G 70 -7 -4.09243 | overlap 1245801 GCATGACCCCCATCT CGCACA GGGCGA TGTGCG TTTTGAACCGCTGTC CKO_01276 1245225 - 1246058 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase CKO_01277 1246055 - 1246447 + | putative transcriptional regulator CKO_01278 1246451 - 1247260 + | putative transcriptional regulator CKO_01279 1247296 - 1248150 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1575 1248218 - 1248244 + TF 100 -10.1 -5.28176 | gap 1 AACGCGGTTTCGTAA GCCCGGAAAGCG TAAA CGCTA-CCGGGC TTTTTTGTCCGTCAG CKO_01281 1249356 - 1248256 - | calcium/sodium:proton antiporter TERM 1576 1248823 - 1248807 - Gf 74 -6.5 -4.33105 | GAATCAGCAGGAAAA CGCCG TACATCG CGGCG GAAATAAGCGCCACT TERM 1577 1249367 - 1249380 + GH 74 -3.1 -4.93968 | GTCATTATGATTCTC CATCT CCGC AGGTG TTTTTAATTATAAAT CKO_01280 1249342 - 1249512 + | hypothetical protein CKO_01282 1249628 - 1249858 + | cation transport regulator CKO_01283 1249991 - 1250722 + | hypothetical protein CKO_01286 1250998 - 1250753 - | hypothetical protein TERM 1578 1250885 - 1250899 + GgF 85 -4.2 -5.28778 | TAAAATATCGGTCTG CGTGTC TTT GACGTG TTTTTTCTCGCTCAT CKO_01284 1250772 - 1251050 + | hypothetical protein CKO_01285 1250980 - 1251078 + | hypothetical protein TERM 1579 1251131 - 1251121 - TR 75 -3.2 -5.14965 | ATTTTGATCAAAAAA TGGC ATA ACCA TTAAACAAAAATGAC CKO_01287 1252993 - 1251209 - | hypothetical protein TERM 1580 1251331 - 1251341 + g 70 -5.4 -4.50627 | TGCGATCAAGGTGGT TCAC GGA GTGA TTTATTTCCTGAATG TERM 1581 1251756 - 1251766 + g 78 -6.8 -4.60487 | opp_overlap 1251738 1251736, overlap 1251733 CCGCCGCGCGTGGCG GCCT GTG AGGC TTTTTGCGCCTGATC TERM 1582 1252209 - 1252219 + g 81 -6.8 -4.8048 | AGCGCCAGCATACCG GAGG TCG CCTC TTTTTCGTCTAACGC CKO_01288 1253507 - 1253154 - | hypothetical protein TERM 1583 1253610 - 1253600 - g 71 -8.2 -3.77831 | TGACGAATATGGAAA GCCG CCC CGGC GCCACCCAATGGTTT TERM 1584 1254062 - 1254029 - g 70 -9.5 -3.33214 | overlap 1254027 1254024 1254030 AGCTTAACGACAACA TCGACCATCCCCACA TCGC CGGAGGGATGGTCGC GCTGTACAGCTTTAT TERM 1585 1254061 - 1254030 - g 75 -13 -2.59447 | overlap 1254029 1254027 1254024 GCTTAACGACAACAT CGACCATCCCCACA TCGC CGGAGGGATGGTCG CGCTGTACAGCTTTA CKO_01289 1253581 - 1254777 + | hypothetical protein TERM 1586 1254993 - 1254960 - f 87 -10.9 -3.85698 | opp_overlap 1254961, overlap 1254961 CGCGTTTGGGATAAA GGCGTCCTGCAATGC TTCG GCATTGCCGGGCGCT TTTTTTTTTGCAATG TERM 1587 1254961 - 1254992 + F 100 -16.6 -6.3578 | opp_overlap 1254960 1254961 GCGTTTGGGATAAAG GCGTCCTGCAATGC TTCG GCATTGCCGGGCGC TTTTTTTTTTGCAAT TERM 1588 1254992 - 1254961 - f 87 -14.4 -2.91276 | opp_overlap 1254961, overlap 1254960 GCGTTTGGGATAAAG GCGTCCTGCAATGC TTCG GCATTGCCGGGCGC TTTTTTTTTTGCAAT TERM 1589 1255680 - 1255704 + G 74 -7.1 -4.25104 | overlap 1255684 GTGAACCGTGGAATG CCCGTGCGATT AAT GATCGCATTGG TTTTACTGCCGCAAC TERM 1590 1256156 - 1256172 + G 73 -10.8 -3.3676 | GCCGCCGCAGCGGTA GGCGGC ATCAC GCCGCC TTCTCAGCTGTTACG CKO_01290 1255076 - 1256278 + | hypothetical protein TERM 1591 1256589 - 1256607 + G 74 -9.6 -3.68366 | TGGAATGTGCTGGCG TCGCTACA GCG TGTGGCGA TTGGTTTTGGGCTGG CKO_01291 1256280 - 1257161 + | hypothetical protein CKO_01292 1257172 - 1257960 + | hypothetical protein TERM 1592 1257956 - 1257942 - f 74 -7 -4.25104 | overlap 1257945 CTTCCTCTACGAAAA GCAGCC GAA GGCGGC GTAGGGAGGCGGTAT TERM 1593 1258144 - 1258134 - g 77 -8.2 -4.07687 | ACTGGGCGGCGAAAA GCGC TTT GCGC AGACGCTGCTGCATC CKO_01293 1257970 - 1262037 + | hypothetical protein TERM 1594 1262462 - 1262448 - g 71 -8.5 -3.86897 | GTTACGGGCTACAAA CGCGC GTTTG GCGCG GATGTGGTGCCATGC TERM 1595 1262782 - 1262798 + G 75 -6.5 -4.50976 | CCAGCCGCTGGCCTG TTGAGCG AGT CGCGCAA TTTTGTGGTCTGGAA TERM 1596 1262814 - 1262831 + G 83 -8.3 -4.49344 | TTTTGTGGTCTGGAA CCCGCGG AAAT CCGCCGG TTTTATGATGGCTTT TERM 1597 1262967 - 1262977 + G 71 -4.6 -4.65895 | AAATACGGGCGGGAA GGCT GCG GGCC TTTTTCGCTGACCGG TERM 1598 1263081 - 1263091 + G 71 -8.2 -3.85698 | CCGCAGGATCTGTCG CGGG TTG CCCG TTTCTGGGGCACGGA CKO_01294 1262034 - 1264646 + | hypothetical protein TERM 1599 1265781 - 1265803 + G 78 -6.2 -4.82901 | overlap 1265783 CCCGACGATGGAGTA CCGTCAGCGT AAA ACGCTCACTG TTTTTCTGGCGACGC TERM 1600 1265783 - 1265801 + G 71 -7.4 -4.03995 | overlap 1265781 CGACGATGGAGTACC GTCAGCGT AAA ACGCTCAC TGTTTTTCTGGCGAC CKO_01295 1264783 - 1266147 + | hypothetical protein CKO_01296 1266798 - 1266148 - | transcriptional regulator NarL TERM 1601 1266814 - 1266824 + r 72 -5.4 -4.42062 | GGGTATCTCCTTGGA CTTC TGT GAAG TTTGTTTCGGGAATA CKO_01297 1268587 - 1266791 - | nitrate/nitrite sensor protein NarX TERM 1602 1267603 - 1267654 + g 93 -12.9 -3.96327 | gap 1, overlap 1267604 GTCGCCATTTCAGCG TGGTGCCGCCGTTGATCGCG-GGC AGCGC GCCGCGCGGGCAGAGGTGGCACCC TTTGTCATCACAACT TERM 1603 1267604 - 1267653 + g 93 -16.4 -2.97475 | gap 1, overlap 1267603 TCGCCATTTCAGCGT GGTGCCGCCGTTGATCGCG-GGC AGCGC GCCGCGCGGGCAGAGGTGGCACC CTTTGTCATCACAAC TERM 1604 1268212 - 1268225 + g 83 -9.5 -4.08706 | opp_overlap 1268212 1268211 1268209 CAAAACGCATAACAT CGCCG GCAA CGGCG TTTCTGTCCTGCGCG CKO_01298 1268628 - 1268849 + | hypothetical protein TERM 1605 1269045 - 1269090 + F 93 -10.3 -4.61868 | overlap 1269040 1269046 GCGTGGTCATCGTGT TGCCAGCCGCAACCTGTGGAT TTCC GTCCCCTGTTTGCTGCTGGCG TTTTGTGTATGGATG TERM 1606 1269046 - 1269089 + F 82 -11.6 -3.36398 | overlap 1269040 1269045 CGTGGTCATCGTGTT GCCAGCCGCAACCTGTGGAT TTCC GTCCCCTGTTTGCTGCTGGC GTTTTGTGTATGGAT TERM 1607 1269133 - 1269143 + G 74 -6.8 -4.27316 | opp_overlap 1269133 GTCGCGGTGAATTTA CCGA AGG TCGG TTTTAACTTCACCAC TERM 1608 1269447 - 1269433 - g 70 -5.6 -4.45168 | TTTCCAAAACAGAAA CAGGGC GGC GCGCTG GGTCTGAACGGCGGT TERM 1609 1270178 - 1270199 + G 75 -5.9 -4.67607 | gap 1 CATTGGGCTTTATCT CTG-CGATTG GCG CAATCGGCGG TTTCTTTATTCCGAA CKO_01299 1269103 - 1270338 + | hypothetical protein TERM 1610 1270364 - 1270382 + G 100 -8.8 -6.08563 | GTTTGATTATCCATT GCGCGG CGTTAGA CCGCGC TTTTTTTTGTCTGTT CKO_01300 1270351 - 1270563 + | hypothetical protein TERM 1611 1270751 - 1270782 + G 74 -10.3 -3.57144 | gap 1, opp_overlap 1270774 GTAAATTCCTGGACC GGTTTCGCTACTTC AAACA GAAG-GGCGAAACC TTTGCCGATGGGCAC TERM 1612 1271186 - 1271174 - g 76 -3.4 -5.04601 | CCGATAAAGCAAAAA GCTT CAAAC AAGC GCGTGGTCGTGGTGG TERM 1613 1272492 - 1272481 - g 78 -5.8 -4.72272 | opp_overlap 1272488, overlap 1272483 GTCGGCCAGGAAAAA CTGC GTCC GCAG ACCGGCTGGCAGCCG TERM 1614 1272770 - 1272757 - g 73 -5.2 -4.66833 | CGTGAAGCGGAAAAA GCCG GGATGA CGGC GGTGGATTACACCGT TERM 1615 1273133 - 1273146 + G 70 -6.7 -4.1673 | opp_overlap 1273124 ACGACATGAATACCT CGGAT ATGC ATCCG TTTATTCACCCGTTG CKO_01301 1270732 - 1274475 + | hypothetical protein TERM 1616 1274569 - 1274555 - g 73 -5.6 -4.60041 | AGTGACCTGTAAAAA CGTCTG GAC CAGCCG TGAAGGTATGGAATA TERM 1617 1275121 - 1275089 - g 79 -13.6 -2.74999 | gap 1, opp_overlap 1275086, overlap 1275086 CAAGCGTGAAGAGGA CGGCATC-GTCCTGA TTGA TCAGGACAAATGCCG CGGCTGGCGTATGTG CKO_01302 1274472 - 1276007 + | hypothetical protein CKO_01303 1276004 - 1276714 + | hypothetical protein CKO_01304 1276714 - 1277391 + | hypothetical protein TERM 1618 1277429 - 1277414 - g 74 -10.4 -3.53012 | opp_overlap 1277414 TTGTGTGCGGCTAAA CCCTGC TTCG GCAGGG TTTTTTTATGCCTGT TERM 1619 1277414 - 1277429 + G 100 -10.4 -5.65177 | opp_overlap 1277414 TTGTGTGCGGCTAAA CCCTGC TTCG GCAGGG TTTTTTTATGCCTGT CKO_01305 1277403 - 1277564 + | hypothetical protein TERM 1620 1277630 - 1277643 + G 100 -8.1 -5.65177 | opp_overlap 1277630 1277629 GGCGCGTAGCTAAAC CCTGC TTCG GCAGG TTTTTTTATGCCTGT CKO_01306 1277566 - 1277727 + | hypothetical protein TERM 1621 1277853 - 1277871 + T 77 -8.8 -3.97636 | overlap 1277842 1277854 GCCTCGCCCTTCGGG TCGTTGCC TTC GGCAACGC TTTCTCGCTTCCGCT TERM 1622 1277854 - 1277870 + T 80 -12.3 -2.981 | overlap 1277842 1277853 CCTCGCCCTTCGGGT CGTTGCC TTC GGCAACG CTTTCTCGCTTCCGC CKO_01310 1279188 - 1278346 - | formyltetrahydrofolate deformylase CKO_01311 1279570 - 1279241 - | hypothetical protein TERM 1623 1279736 - 1279721 - H 100 -6.8 -5.93809 | overlap 1279722 1279732 CCTGGATAAAAAAAA CGGCGT ACAA ACGCCA GGGTAGCGCTATGTT TERM 1624 1279735 - 1279722 - H 76 -8.1 -4.15201 | overlap 1279721 1279732 CTGGATAAAAAAAAC GGCGT ACAA ACGCC AGGGTAGCGCTATGT CKO_01312 1279808 - 1280713 + | hypothetical protein CKO_01313 1280804 - 1281817 + | response regulator of RpoS CKO_01314 1282019 - 1282927 + | UTP--glucose-1-phosphate uridylyltransferase subunit GalU TERM 1625 1282948 - 1282968 + GT 100 -16.9 -5.78622 | opp_overlap 1282944 1282945 ATAATCTGAAAGGCG CGGCGCTGT TTA ACAGCGCCG TTTTTTTTGCCCTGA TERM 1626 1283016 - 1283032 + GT 100 -13.7 -4.07568 | opp_overlap 1283016 GAAGGGCAAAAAAAA TCCCGCC ACT GGCGGGA TTTTAAGCAAACACA TERM 1627 1283032 - 1283016 - gT 100 -13.7 -5.81032 | opp_overlap 1283016 GAAGGGCAAAAAAAA TCCCGCC ACT GGCGGGA TTTTAAGCAAACACA CKO_01316 1283468 - 1283055 - | global DNA-binding transcriptional dual regulator H-NS TERM 1628 1283132 - 1283146 + Gg 78 -7.1 -4.55128 | CTGCCGGTGTACGAC CCTGG CCAGT CCAGG TTTTCGTTTCACCGT CKO_01315 1282899 - 1283372 + | hypothetical protein CKO_01317 1284010 - 1284627 + | thymidine kinase TERM 1629 1284621 - 1284636 + T 79 -10.4 -3.48395 | opp_overlap 1284613 1284615 1284616 GGAGAAACACCGCCA CGCGTG ATTG CACGCG TTCTGTAGGCCGGAT TERM 1630 1284762 - 1284745 - T 100 -14.1 -5.82316 | opp_overlap 1284745 ATCAGGCAAAAAAAA GCCCCCG AAAA CGGGGGC TTTTTCAGAATGTCG TERM 1631 1284745 - 1284762 + T 100 -14.1 -4.61231 | opp_overlap 1284745 ATCAGGCAAAAAAAA GCCCCCG AAAA CGGGGGC TTTTTCAGAATGTCG CKO_01318 1287467 - 1284792 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 1632 1288016 - 1288034 + G 84 -8.8 -4.29106 | overlap 1288012 1288019 TGCGCTGGTAAACCC GGTGGGGA TTA TCCCCGTC TTTATTAGTATGACC CKO_01319 1287855 - 1288592 + | hypothetical protein TERM 1633 1288630 - 1288611 - f 93 -10.7 -4.42386 | opp_overlap 1288611 TCCTGACCGATAAAA CGGAGCC GCTTCA GGCTCCG TTTCTTTTCCATTAT TERM 1634 1288611 - 1288630 + F 93 -10.7 -4.73092 | opp_overlap 1288611 TCCTGACCGATAAAA CGGAGCC GCTTCA GGCTCCG TTTCTTTTCCATTAT TERM 1635 1289839 - 1289829 - g 80 -4.6 -5.00884 | overlap 1289830 ATTGCGGGCAAAAAA CCGG CGA CCGA TCTCGGCGTAAAAGC CKO_01320 1289364 - 1290995 + | hypothetical protein TERM 1636 1291031 - 1291003 - f 79 -9.6 -3.68244 | opp_overlap 1291002 1291000 1291004 1291004, overlap 1291004 AGCATTAATGGCAAA GCGTGGGGCAAA CGTGT TTTGCCCCACAG TGTCTTATTTTCATC TERM 1637 1291030 - 1291004 - f 82 -13.1 -2.80464 | opp_overlap 1291002 1291000 1291004 1291004, overlap 1291003 GCATTAATGGCAAAG CGTGGGGCAAA CGTGT TTTGCCCCACA GTGTCTTATTTTCAT TERM 1638 1291004 - 1291030 + F 73 -10.9 -2.64958 | opp_overlap 1291004 1291003, overlap 1291002 1291000 1291004 GCATTAATGGCAAAG CGTGGGGCAAA CGTGT TTTGCCCCACA GTGTCTTATTTTCAT TERM 1639 1291004 - 1291031 + F 77 -10.7 -3.43405 | gap 1, opp_overlap 1291004 1291003, overlap 1291004 1291002 1291000 GCATTAATGGCAAAG C-GTGGGGCAAA CGTGT TTTGCCCCACAG TGTCTTATTTTCATC TERM 1640 1291090 - 1291057 - f 71 -7.6 -3.9712 | gap 1 TCATCGCACTATAAA CATCTC-TCTTTCAG TGCGT CTGAATGACGAGATG TAAAGGCACACGCCA TERM 1641 1291141 - 1291164 + G 74 -2.5 -5.03945 | gap 2, overlap 1291143 1291144 AATTTATTTTACGTC GCTGTCTGGAA GCGA TTCC-GAC-GC TTTTTATACTTATTA TERM 1642 1291419 - 1291430 + G 91 -7.2 -4.87893 | overlap 1291384 1291383 GTTTCGGCGAAGCTG GGCG CAGC CGCC TTTTTCCTTGCCGTT CKO_01321 1291119 - 1292039 + | oligopeptide transporter permease TERM 1643 1292086 - 1292074 - g 100 -9.1 -5.1963 | GTTAAGTAAGAAAAA CAGCG AGA CGCTG GAGAATTTCAGTGAG CKO_01322 1292054 - 1292962 + | hypothetical protein CKO_01323 1292974 - 1293987 + | oligopeptide transporter ATP-binding component CKO_01324 1293984 - 1294988 + | hypothetical protein TERM 1644 1295015 - 1294995 - T 100 -15.5 -3.32997 | opp_overlap 1294995, overlap 1294990 CCGCTATAAATTTAA GGGCTGACA TGA TGTCAGCCC TTTTTTTTGGCATCA TERM 1645 1294995 - 1295015 + T 100 -15.5 -5.78622 | opp_overlap 1294990 1294995 CCGCTATAAATTTAA GGGCTGACA TGA TGTCAGCCC TTTTTTTTGGCATCA CKO_01325 1295382 - 1295053 - | dsDNA-mimic protein CKO_01326 1296877 - 1295417 - | cardiolipin synthetase TERM 1646 1295750 - 1295729 - G 89 -8.7 -4.66609 | gap 1 CAGTTCAGTGAAAAA GGCGCGGCTG GCC CAGCCG-ACC AGCATGGAGTCATTT TERM 1647 1296587 - 1296569 - G 76 -10.2 -3.63627 | opp_overlap 1296569 1296568 1296566 1296571 CTCGCACAGCTTAAA CAGCGACG AAG CGACGCTG CTGTTTTCTTCGGCG CKO_01327 1297020 - 1297193 + | hypothetical protein TERM 1648 1297225 - 1297199 - T 82 -10.9 -3.50869 | gap 1, overlap 1297202 CAGCATCTGATACAA CCA-GGGCACCG TATT CGGTGCCCATGA ATGCAAACCCCGCCT TERM 1649 1297221 - 1297202 - T 93 -15 -2.89298 | overlap 1297199 CATCTGATACAACCA GGGCACCG TATT CGGTGCCC ATGAATGCAAACCCC CKO_01328 1297540 - 1297244 - | YciI-like protein TERM 1650 1298395 - 1298385 - g 74 -4.6 -4.74103 | GCGTGAAGTGAAAAA CGCG ATG CGCA GATGGCGCTATGAAG CKO_01329 1297765 - 1298481 + | transport protein TonB TERM 1651 1298502 - 1298537 + T 74 -10.4 -3.18264 | opp_overlap 1298498 1298513, overlap 1298505 1298513 ATCCCCTTAAATCGT AGAGCGGATAAGGCGG CGCA CCGCCTTATCCGGTAA TTCATGCCTGAACCG TERM 1652 1298505 - 1298534 + T 100 -16.5 -2.79098 | opp_overlap 1298498 1298513, overlap 1298502 1298513 CCCTTAAATCGTAGA GCGGATAAGGCGG CGCA CCGCCTTATCCGG TAATTCATGCCTGAA TERM 1653 1298526 - 1298513 - T 73 -9.5 -3.34962 | opp_overlap 1298505 1298502 1298513, overlap 1298498 TCGTAGAGCGGATAA GGCGG CGCA CCGCC TTATCCGGTAATTCA TERM 1654 1298513 - 1298526 + T 73 -9.5 -3.35015 | opp_overlap 1298513 1298498, overlap 1298505 1298502 TCGTAGAGCGGATAA GGCGG CGCA CCGCC TTATCCGGTAATTCA CKO_01330 1298940 - 1298539 - | acyl-CoA thioester hydrolase CKO_01331 1299610 - 1299071 - | intracellular septation protein A TERM 1655 1299446 - 1299415 - G 71 -4.2 -4.63218 | overlap 1299416 CGTTGTGGAAGAAAA TGGTCAGGCCGCCG AACA CGGCAACCAGAACG AAAGTGATCAACGCC CKO_01332 1300409 - 1299666 - | hypothetical protein TERM 1656 1300054 - 1300037 - G 70 -6.9 -4.21676 | overlap 1300038 ACAATTTAGGTAAAA CCGGCGC GCTG GCACCGA TAGCACGTAATGCGC TERM 1657 1300388 - 1300368 - G 78 -6.1 -4.68593 | TTGATTACGGAAAAA GTTCCCCGT GTC ACGGTAAAC GGACTTCGCCGTGAT CKO_01333 1300775 - 1301413 + | outer membrane protein W TERM 1658 1301436 - 1301456 + F 100 -16.9 -5.16133 | opp_overlap 1301436 TGACCCATCTAAAAA GCGGGCTGT CAT ACAGCCCGC TTTTTATATTCTGCT TERM 1659 1301456 - 1301436 - f 100 -16.9 -4.67353 | opp_overlap 1301436 TGACCCATCTAAAAA GCGGGCTGT CAT ACAGCCCGC TTTTTATATTCTGCT CKO_01334 1301539 - 1301814 + | hypothetical protein CKO_01335 1301889 - 1303358 + | hypothetical protein TERM 1660 1303366 - 1303393 + T 73 -10.6 -3.08798 | gap 1, opp_overlap 1303359 1303364, overlap 1303391 GGGAATGACAGGATT GGCCCGAT-AAGC ATG GCATCATCGGGCC TGTTGCCTGCGCAAT CKO_01336 1304216 - 1303410 - | hypothetical protein CKO_01337 1305409 - 1304216 - | tryptophan synthase subunit beta TERM 1661 1304972 - 1304998 + g 70 -6.5 -4.09243 | opp_overlap 1304972 CAGTCGCATACGAAA GACGTTTGGCG ACTGA CGCTCGACGTC TTTTGCACCCATATA TERM 1662 1305133 - 1305143 + g 81 -6.8 -4.77173 | CCAGCAGCGCCTGCC CCAG TAC CTGG TTTGTTTTGTGCGCG CKO_01338 1306781 - 1305420 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase TERM 1663 1305511 - 1305523 + g 95 -10.5 -4.62471 | opp_overlap 1305509 GAATTAAAATCGAGA CCGGC ACA GCCGG TTTTTGCCGCTTCCA TERM 1664 1305797 - 1305812 + g 75 -6.1 -4.62783 | overlap 1305788 GTTGCACGACCTTGA GCGAC AAGGTG GTCGC TTTTTCACATACCTC CKO_01339 1308377 - 1306782 - | bifunctional anthranilate synthase/anthranilate phosphoribosyltransferase CKO_01340 1309951 - 1308377 - | anthranilate synthase component I TERM 1665 1309289 - 1309324 + g 86 -7.4 -4.68506 | gap 1, overlap 1309291 GGGTTCGGTTAATTG CTGCGTCAG-CTGCGCG AGG TGCGCCGTCAGACGCTG TTTTTCCGCTTCATT TERM 1666 1309291 - 1309322 + g 74 -8.6 -3.94933 | gap 1, overlap 1309289 GTTCGGTTAATTGCT GCGTCAG-CTGCGCG AGG TGCGCCGTCAGACGC TGTTTTTCCGCTTCA TERM 1667 1309989 - 1309971 - H 100 -8.8 -5.75342 | opp_overlap 1309980 TCTGTTCAAAAAAAA GCCCGC TCATCTG GCGGGC CGGGTATCTGGTTGC TERM 1668 1310636 - 1310650 + G 83 -8.5 -4.46926 | overlap 1310624 1310623 TGGGGCCGTGACGCG CGGGC ATTTC GCCCG TTTTCTGGTGGAGTG CKO_01341 1310316 - 1311083 + | hypothetical protein CKO_01342 1311091 - 1311711 + | hypothetical protein TERM 1669 1311745 - 1311762 + F 72 -9.1 -3.49851 | opp_overlap 1311745 1311746, overlap 1311741 1311746 TACGCGGCCTTAAAA TGGCGCT GTAA AGCGCCG TTGATTCTCCTGTTC TERM 1670 1311762 - 1311745 - f 71 -6.9 -4.07885 | opp_overlap 1311745 1311741 1311746, overlap 1311746 TACGCGGCCTTAAAA TGGCGCT GTAA AGCGCCG TTGATTCTCCTGTTC TERM 1671 1311761 - 1311746 - f 73 -10.4 -3.04517 | opp_overlap 1311745 1311741 1311746, overlap 1311745 ACGCGGCCTTAAAAT GGCGCT GTAA AGCGCC GTTGATTCTCCTGTT TERM 1672 1311746 - 1311761 + F 71 -10.4 -2.69188 | opp_overlap 1311746 1311745, overlap 1311745 1311741 ACGCGGCCTTAAAAT GGCGCT GTAA AGCGCC GTTGATTCTCCTGTT TERM 1673 1311930 - 1311915 - g 80 -9 -4.13767 | GCGTTGACGGCAAAA TCGCCA CGCT TGGCGA TCGCGTTGAAATCAC TERM 1674 1312065 - 1312082 + G 81 -6.9 -4.77157 | GTACCCGTAACGACC CGGAAGG TCGT CCTACCG TTTTTGATCGCTTAC CKO_01343 1311812 - 1312687 + | 23S rRNA pseudouridylate synthase B TERM 1675 1312691 - 1312727 + T 74 -7.2 -4.2349 | gap 1, overlap 1312692 1312695 1312711 AACAACGGTTGATGC TGAATGCCCGGT-GGCG CTTA CGCTTACCGGGCCTACG TTTTGCCTGTAGGCC CKO_01344 1313369 - 1312779 - | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 1676 1313210 - 1313245 + g 74 -6.9 -4.35926 | gap 2, overlap 1313213 CTTTTTTACCGTGGC CGACGGCGCGCGTTGCG GTGC CG-AATGC-CGCCGTGG TTTTGCCTTTACCGT CKO_01345 1314127 - 1313366 - | short chain dehydrogenase TERM 1677 1314244 - 1314231 - R 71 -9.5 -3.13343 | ATTTCAATCAGTCAA CGGCG ATAA CGCCG AAAAATGAACACTTT CKO_01346 1314354 - 1314223 - | hypothetical protein TERM 1678 1314888 - 1314900 + GH 73 -10.5 -3.09834 | opp_overlap 1314884 CGGTGGACAAAGTCG CCGCC AGC GGCGG TTACATGATGGCCTG CKO_01347 1314356 - 1315411 + | putative periplasmic protease CKO_01348 1315381 - 1315539 + | hypothetical protein CKO_01349 1315427 - 1315570 + | hypothetical protein CKO_01350 1315818 - 1315567 - | hypothetical protein TERM 1679 1316663 - 1316653 - g 74 -2.4 -5.04356 | overlap 1316654 1316655 CGAAATAACCAAAAA CGCG ATT CGCC AGGCGTTTGATAAGC TERM 1680 1316809 - 1316778 - g 95 -6.4 -5.40072 | opp_overlap 1316778, overlap 1316779 TGCTGTGGAAAAAAA TTGCGCGAGGCCTG TCGG CAGGCCGCGTACAG TCCGTTGCCGTGCGT TERM 1681 1316808 - 1316779 - g 76 -9.9 -3.83561 | opp_overlap 1316778, overlap 1316778 GCTGTGGAAAAAAAT TGCGCGAGGCCTG TCGG CAGGCCGCGTACA GTCCGTTGCCGTGCG TERM 1682 1317140 - 1317129 - g 90 -4.4 -5.40072 | TTGGCGTGAAAAAAA CCAT GATG ATGG CGCAGCGCTTGTACG TERM 1683 1317801 - 1317783 - g 76 -3.1 -5.03314 | overlap 1317785 TCTATGCTGAAAAAA TGGGTGA GATTG TCACCGA TCGACTGGAAGAAAA CKO_01351 1316219 - 1318816 + | DNA topoisomerase I TERM 1684 1318845 - 1318862 + F 100 -10.5 -5.4505 | opp_overlap 1318845 GAATTTCACTTAAGA GGGTCGC GCAA GCGGCCC TTTTTTATTCCGGGC TERM 1685 1318966 - 1318984 + F 81 -12.4 -3.29511 | opp_overlap 1318958 TATTAAATCGTATTA GCAGCGCG TGA CGTGCTGC TTATCAAACGATGAC CKO_01352 1319028 - 1320002 + | transcriptional regulator CysB TERM 1686 1320011 - 1320058 + F 76 -11.7 -2.7204 | opp_overlap 1320003, overlap 1320003 AAAGTAATCACGCGC GTGAGTT-TTCAGGTATCTCC AGACATGA GGAGATACCTGAATAAC-CAC TAAATTTATGGATTA CKO_01353 1320073 - 1320201 + | hypothetical protein CKO_01354 1320306 - 1320467 + | hypothetical protein CKO_01355 1320392 - 1320523 + | hypothetical protein CKO_01356 1320436 - 1320531 + | hypothetical protein TERM 1687 1320909 - 1320883 - g 81 -12.2 -3.54424 | overlap 1320884 TCGTATGCCGGTAAA TGCCCGATGGCG CAA CGTCATCGGGCC TGCGCATGCCGATTC TERM 1688 1320908 - 1320884 - g 86 -15.7 -2.72511 | overlap 1320883 CGTATGCCGGTAAAT GCCCGATGGCG CAA CGTCATCGGGC CTGCGCATGCCGATT CKO_01357 1320882 - 1321043 + | hypothetical protein TERM 1689 1322285 - 1322271 - g 71 -4.2 -4.59511 | AACACCGCGCAAAAA GACCGG CAG CCAATC GATTATGTTATGAAC TERM 1690 1322715 - 1322689 - g 74 -7.3 -4.07687 | gap 2, opp_overlap 1322693 1322696, overlap 1322690 ATCCGCTGGTGAAAA CCAACTGGCTGGC GTC GCC-GCC-GCTGG TTGTCGCCTATGCGC TERM 1691 1322933 - 1322916 - g 74 -9.9 -3.75332 | ACGCCGGAATGGAAA GCGATCA ATGT TGATCGC TCAGACACCTATGGC TERM 1692 1323347 - 1323337 - g 83 -8.2 -4.49311 | opp_overlap 1323336 ATCAGCAGGAGAAAA CGCC GCT GGCG GTGATTGCGGGTAAA CKO_01358 1321053 - 1323728 + | aconitate hydratase TERM 1693 1323740 - 1323767 + TF 86 -11.4 -3.72695 | gap 1, opp_overlap 1323740 TTAAGACATAAAAAA GGCCTGAT-AGCG CGG TGCTCATCAGGCC TTTAATAGCAAAAAT TERM 1694 1323767 - 1323740 - Tf 100 -10.7 -5.47431 | gap 1, opp_overlap 1323740 TTAAGACATAAAAAA GGCCTGAT-AGC GCGGT GCTCATCAGGCC TTTAATAGCAAAAAT CKO_01360 1324373 - 1323783 - | GTP cyclohydrolase II CKO_01359 1324221 - 1324457 + | hypothetical protein TERM 1695 1324856 - 1324875 + G 71 -4.2 -4.58585 | gap 1 CGCTGGTGAAGGAGC GGGTGCAGG AAC CCCG-ACCC TTTGTTATTTGGCTG TERM 1696 1324980 - 1324994 + G 70 -5.6 -4.42386 | opp_overlap 1324968 1324966 ACAGCTGTCAGGGCA GCAGGA TAT TCCGGC TTTTCTGCGTCAACA TERM 1697 1325100 - 1325125 + G 72 -3.9 -4.75472 | overlap 1325101 AGGACTATTATGGCC GCGCAGGCGTA CCCT TACGATTGCGA TTTTGTTAGTCTGGG CKO_01361 1324561 - 1325325 + | phosphatidylglycerophosphatase B CKO_01363 1325492 - 1325358 - | hypothetical protein CKO_01362 1325476 - 1325784 + | hypothetical protein TERM 1698 1326643 - 1326627 - g 83 -7.9 -4.63218 | opp_overlap 1326629 1326629, overlap 1326630 GGCCGTGGAAGAAAA CACCGGC GCC GCCGCTG AGTTGATGCTTGCCG CKO_01364 1325791 - 1326960 + | hypothetical protein CKO_01365 1327090 - 1327887 + | hypothetical protein CKO_01366 1327887 - 1328213 + | translation initiation factor Sui1 TERM 1699 1328245 - 1328222 - T 100 -11.1 -5.26875 | opp_overlap 1328222 CGGCTAATGAAAAAA GCCACGATA GTTATT TATCGTGGC TTTAAATTTCACTGT TERM 1700 1328222 - 1328245 + T 95 -11.8 -3.86311 | opp_overlap 1328222 CGGCTAATGAAAAAA GCCACGATAG TTAT TTATCGTGGC TTTAAATTTCACTGT CKO_01367 1328544 - 1328326 - | lipoprotein TERM 1701 1328811 - 1328790 - R 77 -11.7 -2.90763 | opp_overlap 1328793 CTCAGAGGGGAGAGA TGATTTGCC ATCT GGCAAATCA TCTGCAATGCGCTCA CKO_01368 1329546 - 1328824 - | hypothetical protein TERM 1702 1328989 - 1329000 + g 75 -5.8 -4.62069 | opp_overlap 1328988 1328989 GTCCGTCAGAACAAT GGCT TCAG AGCC TTTTTCCAGTACGGC TERM 1703 1329066 - 1329056 - G 77 -8.2 -4.07568 | overlap 1329057 TCCCGTCCGGTAAAA CCGG TAT CCGG CTGCCAGCCATCGAT TERM 1704 1329436 - 1329447 + g 71 -4.4 -4.59511 | opp_overlap 1329425 1329422, overlap 1329443 ACCATGCGCACGGCG CAGA TAGC TCTG TTTTTCCAGGGTGTT CKO_01370 1329856 - 1329665 - | hypothetical protein CKO_01369 1329846 - 1329977 + | hypothetical protein CKO_01371 1332106 - 1330031 - | RNase II stability modulator TERM 1705 1331635 - 1331619 - G 74 -7.9 -4.15543 | CAAAGACGGTTAAAA CGCTGGA TAT TCCCGCG GCTGTCAAGGATTAC TERM 1706 1332256 - 1332231 - R 100 -11.2 -5.93809 | CGGGCAGAAAAAAAA CGGCCTTTCC GGTTAA AGAAAGGCCG CTACATCAAAAACGT TERM 1707 1332289 - 1332269 - R 71 -3.8 -4.8048 | CCGCTACATCAAAAA CGTCAGGC GACAG GCCGGGCG ATAATGCTACGGGTT CKO_01372 1334205 - 1332271 - | exoribonuclease II TERM 1708 1333264 - 1333288 + g 71 -10.7 -3.21099 | overlap 1333271 CCAGTCGGAGACATT GTCGTAGGCCA GTT TGGCTTTCGAC TTGATCGTGGCCGCA TERM 1709 1333670 - 1333689 + g 71 -4.8 -4.63542 | overlap 1333673 TCAAGCATTTCTGTC GCCGCGCC GTTC GGCGCTTC TTTTTCGAGATTATG TERM 1710 1333673 - 1333686 + g 88 -9.5 -4.42235 | overlap 1333670 AGCATTTCTGTCGCC GCGCC GTTC GGCGC TTCTTTTTCGAGATT TERM 1711 1334304 - 1334316 + rH 72 -4.8 -4.59853 | CGCGGTTAATGTGTT TCGC CCAAC GCGA TTTTTAAACGGTTCA CKO_01374 1335451 - 1334294 - | hypothetical protein TERM 1712 1335676 - 1335656 - gR 100 -14.7 -3.76837 | CAGAGAAGGGAATAA TGGGCGACG CTG CGCCGCCCA TTGCGGGAAGTGAAA CKO_01373 1335426 - 1335689 + | hypothetical protein CKO_01375 1336504 - 1335695 - | enoyl-(acyl carrier protein) reductase TERM 1713 1337077 - 1337089 + r 70 -4.7 -4.39329 | opp_overlap 1337077 TGACTTCACAAAAGC CCGCG TAT CGCCG TTTCTTCTCTCCCGT CKO_01377 1337981 - 1337148 - | hypothetical protein CKO_01378 1338873 - 1338067 - | hypothetical protein CKO_01379 1339867 - 1338875 - | hypothetical protein CKO_01380 1340757 - 1339867 - | hypothetical protein TERM 1714 1340476 - 1340452 - G 85 -11.3 -3.96624 | CAGCGTGACGATAAA CGCGCCGCCGA CGG TGGGCGCCGCG CCGCTCAGCAGGCGA CKO_01381 1341709 - 1340744 - | hypothetical protein CKO_01382 1343349 - 1341706 - | hypothetical protein TERM 1715 1341829 - 1341849 + g 70 -6.7 -4.09511 | ACGCAGCGAGGAGGC GAGCGGCAG TAT CGGCAGCTC TTTTGCCAGAATATT CKO_01383 1344088 - 1343528 - | hypothetical protein CKO_01385 1344301 - 1344131 - | hypothetical protein CKO_01384 1344122 - 1344346 + | hypothetical protein CKO_01386 1345497 - 1344523 - | phage shock protein operon transcriptional activator TERM 1716 1345209 - 1345186 - G 71 -4.4 -4.66609 | opp_overlap 1345194, overlap 1345189 CAGCTCATCCAAAAA GAGCGTACCG CCAT CGGCGCGTTC AAAGCGCCCGGGATG TERM 1717 1345745 - 1345733 - g 89 -9.1 -4.56597 | GCGCTGCTGGAAAAA GCGGA AGA TCCGC AAAAGCTGGTGCGCC CKO_01387 1345670 - 1346338 + | phage shock protein PspA TERM 1718 1346369 - 1346345 - f 71 -10.7 -2.74982 | gap 1, overlap 1346344 1346342 AACCAATAATAATAC CTGGCGGCGC CCGAAC GCGCCGCC-G CTCATCACCTGTAAG CKO_01388 1346393 - 1346617 + | phage shock protein B CKO_01389 1346617 - 1346976 + | DNA-binding transcriptional activator PspC CKO_01390 1346987 - 1347208 + | peripheral inner membrane phage-shock protein TERM 1719 1348099 - 1348109 + G 78 -6.8 -4.62069 | ATATGGCGGGCGCGC CTGC GTT GCAG TTTTTCCCGTGGCCG CKO_01391 1347417 - 1348820 + | hypothetical protein TERM 1720 1349297 - 1349287 - g 70 -6.8 -4.07568 | TGCGTTTTGCGAAAA GCTG GCG CAGC AGGCCGGTATCGATC CKO_01392 1348817 - 1349878 + | hypothetical protein CKO_01393 1350027 - 1351568 + | DNA-binding transcriptional regulator TyrR TERM 1721 1351585 - 1351610 + F 100 -11.9 -5.71712 | opp_overlap 1351585 TAATGAATAGAAGAA CACCCGACAGT TATT GCTGTTGGGTG TTTTTTTATATCAGA TERM 1722 1351610 - 1351585 - f 77 -9 -4.00234 | opp_overlap 1351585 TAATGAATAGAAGAA CACCCGACAG TTATTG CTGTTGGGTG TTTTTTTATATCAGA TERM 1723 1351941 - 1351952 + G 79 -7.2 -4.40804 | ATTGGTATTGTTTTT GCCG CAAA CGGC TTTTGTGCGGTACTA CKO_01394 1351776 - 1353035 + | hypothetical protein TERM 1724 1353851 - 1353869 + G 78 -2.3 -5.15117 | CGGCTAGCAGATTTA CGCTTGC CTGTA GCGAACG TTTTTTAAACTTTTG CKO_01395 1353022 - 1354755 + | hypothetical protein CKO_01396 1354743 - 1355540 + | hypothetical protein TERM 1725 1355558 - 1355547 - f 76 -4.4 -5.01553 | AATTTATAAATAAAA GCAA GAAA TTGC GAAAAATGAAGGATT TERM 1726 1356096 - 1356118 + G 84 -2.7 -5.32944 | CTGAGTTCAAAAAAT GTACTAACA ATTAA TGATAGTGC TTTTTTACTTCTGCA CKO_01397 1355640 - 1356515 + | hypothetical protein CKO_01399 1357072 - 1356566 - | thiol peroxidase CKO_01398 1356997 - 1357221 + | hypothetical protein CKO_01400 1357208 - 1358173 + | hypothetical protein CKO_01401 1358876 - 1358148 - | murein peptide amidase A TERM 1727 1358349 - 1358299 - G 81 -11.9 -3.51708 | gap 2, overlap 1358295 CAGCTTCCAAACGAA CCGGGCGTTTCGTAACCTACGCTGG AGA CCAGCGGCAGTT-CGAAT-GCCCGG GCCAGCCATTCGCCT TERM 1728 1359927 - 1359917 - g 73 -5.4 -4.56775 | ATCTTTCCCGAAAAA TCTG TAT CAGA AGTTGCTGAAGGATA CKO_01402 1359105 - 1360724 + | hypothetical protein TERM 1729 1360762 - 1360745 - T 95 -12.7 -4.19817 | opp_overlap 1360745 GGCAGTGAGCGAAAA GACGCGG TATT CCGCGTC TTTTTTAATTTGCGG TERM 1730 1360745 - 1360762 + T 100 -12.7 -5.37593 | opp_overlap 1360745 GGCAGTGAGCGAAAA GACGCGG TATT CCGCGTC TTTTTTAATTTGCGG CKO_01403 1361798 - 1360767 - | hypothetical protein CKO_01404 1362035 - 1362295 + | hypothetical protein CKO_01405 1363302 - 1362352 - | universal stress protein UspE CKO_01406 1363575 - 1363393 - | hypothetical protein TERM 1731 1363534 - 1363555 + g 95 -14.5 -3.54029 | opp_overlap 1363537, overlap 1363537 ATCTGTTTGATTCAT GAATGCCGC CATA GCGGCATTC TTATCGTTAGTGGGA TERM 1732 1363552 - 1363537 - G 71 -10.4 -3.18264 | opp_overlap 1363534 1363537 TGTTTGATTCATGAA TGCCGC CATA GCGGCA TTCTTATCGTTAGTG TERM 1733 1363537 - 1363552 + g 80 -10.4 -3.90241 | opp_overlap 1363537, overlap 1363534 TGTTTGATTCATGAA TGCCGC CATA GCGGCA TTCTTATCGTTAGTG CKO_01407 1364079 - 1363888 - | hypothetical protein CKO_01408 1364144 - 1363944 - | hypothetical protein CKO_01409 1365103 - 1364273 - | fumarate/nitrate reduction transcriptional regulator CKO_01410 1365735 - 1365220 - | O-6-alkylguanine-DNA:cysteine-protein methyltransferase CKO_01411 1365941 - 1365729 - | hypothetical protein TERM 1734 1365954 - 1365926 - G 100 -9.5 -5.58179 | overlap 1365928 CAGGAGAATAAAAAA CAGGGACTGTCGA CAT CCGCCAGCCCCTA AAATCTACACAGCAG TERM 1735 1365952 - 1365928 - G 88 -9.9 -4.41512 | overlap 1365926 GGAGAATAAAAAACA GGGACTGTCGA CAT CCGCCAGCCCC TAAAATCTACACAGC CKO_01412 1366257 - 1366820 + | hypothetical protein CKO_01413 1368093 - 1366861 - | hypothetical protein CKO_01414 1368141 - 1368311 + | hypothetical protein TERM 1736 1368493 - 1368513 + F 83 -10.3 -3.74693 | opp_overlap 1368492 1368491, overlap 1368494 CTCGCACAACACATT TGCGCCGGT GAT GCCGGCGCC TTTCCTGCCATACCG TERM 1737 1368494 - 1368512 + F 84 -13.8 -2.84602 | opp_overlap 1368492 1368491, overlap 1368493 TCGCACAACACATTT GCGCCGGT GAT GCCGGCGC CTTTCCTGCCATACC TERM 1738 1368798 - 1368809 + G 74 -7.2 -4.1673 | CAGCGCGCAGTGGCT GGCG TCGA CGCC TTTGTTACCGAATTC CKO_01415 1368631 - 1369614 + | zinc transporter TERM 1739 1369804 - 1369823 + F 100 -9.3 -5.81412 | ATTGATTCGTACGAC GCCGACT TAGATT AGTCGGC TTTTTTTTGCCTGCG CKO_01417 1370102 - 1371475 + | ATP-dependent RNA helicase DbpA CKO_01418 1372492 - 1371557 - | C32 tRNA thiolase CKO_01419 1372809 - 1372537 - | hypothetical protein TERM 1740 1372703 - 1372684 - GR 84 -10.7 -3.85114 | opp_overlap 1372681 1372687 AAAGTGGATATGAAA GCCCGCA ACGGCG TGCGGGC TGATGCGTTTAGCGA CKO_01420 1373146 - 1372712 - | hypothetical protein CKO_01421 1373440 - 1373222 - | hypothetical protein TERM 1741 1373323 - 1373307 - G 70 -2.9 -4.81814 | overlap 1373319 ACCACGACAAGAAAA TCACGAA AAA TACGCGA CGGGACGCCGAGATA CKO_01422 1373610 - 1373485 - | hypothetical protein TERM 1742 1373573 - 1373554 - GR 100 -12.8 -4.46212 | GTTGTTATGAGAAAA GCCCGCCG TTGC CAGCGGGC TGACGGACTTAGAAC CKO_01423 1374709 - 1373582 - | hypothetical protein TERM 1743 1375038 - 1375019 - R 90 -13.6 -3.45134 | opp_overlap 1375019 CGAATGAATTGACAA GCCCGAAC CAAG GTTCGGGC TTTTTTTCGTCCTGA TERM 1744 1375019 - 1375038 + r 100 -13.6 -5.55664 | opp_overlap 1375019 CGAATGAATTGACAA GCCCGAAC CAAG GTTCGGGC TTTTTTTCGTCCTGA CKO_01425 1378598 - 1375074 - | hypothetical protein TERM 1745 1375207 - 1375225 + g 71 -11 -2.87211 | overlap 1375197 TTCAGGCGGCGGAAG CGTTGCTC GTT GAGCAGCG TCTCTGCCAGCGCGT CKO_01426 1378725 - 1378892 + | hypothetical protein CKO_01427 1378874 - 1379140 + | hypothetical protein CKO_01428 1379559 - 1379137 - | heat-inducible protein TERM 1746 1379667 - 1379642 - R 90 -13.3 -3.62096 | overlap 1379643 GGGGATTATCTGAAA GTGCTCCCCTG AACG CAGGGGAGCAG AAGGGTCAGAACAGG TERM 1747 1379666 - 1379643 - R 100 -16.8 -2.77043 | overlap 1379642 GGGATTATCTGAAAG TGCTCCCCTG AACG CAGGGGAGCA GAAGGGTCAGAACAG CKO_01429 1380662 - 1379673 - | hypothetical protein TERM 1748 1380521 - 1380541 + g 74 -4.6 -4.77925 | gap 1, overlap 1380537 1380539 TAACGAAGATGCATA CCGCC-TCG CAAC CGTTGGCGG TTTTTGCCGTTTTTT TERM 1749 1380539 - 1380550 + g 77 -3.6 -5.08824 | overlap 1380521 1380537 CCTCGCAACCGTTGG CGGT TTTT GCCG TTTTTTCAGTCAGCA CKO_01430 1380987 - 1380793 - | hypothetical protein CKO_01432 1382126 - 1381989 - | hypothetical protein TERM 1750 1383030 - 1383056 + GH 79 -10.8 -3.54307 | opp_overlap 1383029 1383026 TATTCAGATAAGCAG GCAGTAGCCGTT GGG ATCGGCTACCGC TTTACAGACAATGTT CKO_01431 1382121 - 1383143 + | hypothetical protein TERM 1751 1383611 - 1383626 + G 89 -3.3 -5.44721 | CATTTAAAAGTAACG GCATT GATCGG AATGC TTTTTTTGAACTGAT CKO_01433 1383193 - 1383654 + | hypothetical protein CKO_01434 1383702 - 1384145 + | hypothetical protein TERM 1752 1387025 - 1387035 + G 70 -6.8 -4.08064 | overlap 1387015 GTCTTTACGCTCTGG CGCA GTT TGCG TTTTGGCGACAACTT CKO_01435 1384490 - 1387129 + | hypothetical protein CKO_01436 1387126 - 1387308 + | hypothetical protein CKO_01437 1387313 - 1387639 + | hypothetical protein TERM 1753 1387650 - 1387666 + F 85 -7.3 -4.95843 | overlap 1387652 AGTAACTGGCAACAG TGCGTAG CTT CTACGTA TTTTCTGTTTTGTAT TERM 1754 1387652 - 1387664 + F 73 -7.7 -4.07119 | overlap 1387650 TAACTGGCAACAGTG CGTAG CTT CTACG TATTTTCTGTTTTGT TERM 1755 1387907 - 1387938 + G 75 -6 -4.56597 | gap 1 CTTCGGGAGGCGATT TCGCTGGGTGTGAAT CAC ATTGATACC-AGCGA TTTTTACGGCCCGCA TERM 1756 1388398 - 1388410 + G 74 -10.5 -3.57561 | TTATGTGCCGTTCTT CCCGC TGG GCGGG TTTACGCCGTTGCAG CKO_01438 1387757 - 1388626 + | putative oxidoreductase CKO_01439 1389294 - 1388689 - | azoreductase TERM 1757 1389185 - 1389199 + g 83 -10 -4.08394 | TCGCGCACGGTGATC GCATCC GCA GGATGC TTTTCGCGCCACTGT TERM 1758 1389628 - 1389613 - g 76 -3.2 -5.11937 | overlap 1389603 1389625 1389627 AAGAAGGTTAAAAAA CCTGAT GCAC AACAGG CCATTCTCCTGGAGA TERM 1759 1389756 - 1389745 - g 90 -5.8 -5.28176 | opp_overlap 1389749, overlap 1389747 1389748 GTCAGCCAGAAAAAA CAGG CCAT CCTG GAGGCCGTTCGCGAC TERM 1760 1391461 - 1391471 + G 77 -8.2 -4.15044 | CGTTTCTCCATCTTC CCGG GTT CCGG TTTGTTCAAGAAGCC TERM 1761 1391855 - 1391842 - g 74 -8.1 -3.96624 | opp_overlap 1391845 1391846 GAGCTGGAGCACAAA TCGCG TCGC CGCGA CATTCTGGTCGATGA CKO_01440 1389496 - 1393398 + | ATP-dependent RNA helicase HrpA TERM 1762 1393403 - 1393455 + T 75 -9.8 -3.64599 | gap 1, opp_overlap 1393391 1393424, overlap 1393404 TCAGCCTGTAGCTCC ATGCTCAGCTCAGGCAGGAGATACC TTCG GGTATCTCCTG-CGGGGCGGCGCGC TTTAGCCTGTCATAA TERM 1763 1393404 - 1393454 + T 82 -13.3 -2.78438 | gap 1, opp_overlap 1393391 1393424, overlap 1393403 CAGCCTGTAGCTCCA TGCTCAGCTCAGGCAGGAGATACC TTCG GGTATCTCCTG-CGGGGCGGCGCG CTTTAGCCTGTCATA CKO_01441 1394312 - 1393407 - | hypothetical protein TERM 1764 1394326 - 1394342 + H 70 -9.5 -3.07575 | ATGGCGATACGCTAT TGTGAGT TTT ACTCACA TTAAATAGCAGTTTT TERM 1765 1394771 - 1394749 - g 78 -6.9 -4.6635 | AAATGCGCAAGAAAA CACGGTCGC TGCGG GCGACGGCG GGGTGATCCGGGGAT CKO_01442 1394414 - 1395076 + | hypothetical protein CKO_01443 1396455 - 1395079 - | hypothetical protein TERM 1766 1395117 - 1395139 + g 75 -5.7 -4.62069 | gap 1, opp_overlap 1395116 GCGCTTTGTAGAGAT CAATCTG-TG CCAG CAGCAGATTG TTTTTCACCTGCACC TERM 1767 1395704 - 1395739 + g 75 -6.8 -4.46656 | gap 1, overlap 1395690 1395726 TCGCTACGGGCCAGG CGCGTCGGGT-TGCTGC CCA GCAGAAGACTCAGCGCG TTTTCCTGTTGTGCG TERM 1768 1395975 - 1395992 + g 95 -14.1 -3.33744 | overlap 1395977 AGGCAACAGTCAGAT CGGCGGC GGCC GCCGCCG CTTTTTGCGCCGCCA TERM 1769 1395977 - 1395993 + g 100 -15.1 -4.56597 | overlap 1395975 GCAACAGTCAGATCG GCGGCGG CCG CCGCCGC TTTTTGCGCCGCCAG CKO_01444 1397534 - 1396452 - | hypothetical protein TERM 1770 1397256 - 1397279 + g 86 -6.6 -5.0538 | overlap 1397258 GCGATAAATACGGTC GTCGATCTGC ATCA GCAGTTCGCC TTTTTTCACCTGCAC CKO_01445 1399228 - 1397576 - | hypothetical protein TERM 1771 1398955 - 1398932 - G 93 -13.2 -3.83026 | opp_overlap 1398928, overlap 1398918 1398917 TGCCCGCAGACCAAA CTGCTGGCGA AATT TCACCAGCAG CAGGTTAATTGAGAC CKO_01447 1399535 - 1399404 - | hypothetical protein TERM 1772 1399790 - 1399767 - gH 71 -9.6 -3.21395 | gap 1, overlap 1399765 ACCCGCGCTACAACA CCATACGCACC ACC GG-GCGTACGG AAGCCAAAATCCTCG TERM 1773 1400179 - 1400194 + GH 71 -6 -4.31835 | opp_overlap 1400170 1400169, overlap 1400181 TGAAACCGGCTACGG GCCGCG TGGC CGCGAC TTTATTGTGCACGTT CKO_01446 1399499 - 1400299 + | hypothetical protein TERM 1774 1400814 - 1400793 - g 71 -4.3 -4.62471 | overlap 1400794 CGGAAGGCGGAAAAA TCCAGCAGC TGGC GCAGGTGGA AGTCGCGTTCACCGC TERM 1775 1400959 - 1400971 + G 74 -3.4 -4.86621 | overlap 1400957 CGGGATTCTGCCGTG GAAC TTTCC GTTC TTTTTGATTGCCCGT CKO_01448 1400528 - 1401943 + | aldehyde dehydrogenase A CKO_01449 1402909 - 1401983 - | hypothetical protein TERM 1776 1402463 - 1402440 - G 77 -4.4 -4.84359 | GCACCGGCAGAAAAA CCCAGCACTC CGAT GCGTTCCGGG TCGATCTTCCACGCT TERM 1777 1402792 - 1402802 + g 78 -6.8 -4.65895 | opp_overlap 1402792 GTTCTGGCGTAAAAA CAGC ATC GCTG TTTTTCGCTCCGGGG TERM 1778 1402802 - 1402792 - G 78 -6.8 -4.56597 | opp_overlap 1402792 GTTCTGGCGTAAAAA CAGC ATC GCTG TTTTTCGCTCCGGGG TERM 1779 1403036 - 1403012 - R 95 -12.1 -4.18161 | overlap 1403013 GATAAATGGTGAAAA CGGCGGAGGAA CAA TGCCTCCGCCA GAGGGTCAGAGTTTG TERM 1780 1403035 - 1403013 - R 82 -13.4 -3.10173 | overlap 1403012 ATAAATGGTGAAAAC GGCGGAGGAA CAA TGCCTCCGCC AGAGGGTCAGAGTTT CKO_01450 1404043 - 1403042 - | hypothetical protein TERM 1781 1403620 - 1403634 + g 71 -11.4 -2.86343 | opp_overlap 1403615 CAGAAACAATCTGGT CGCTGG CAT CCAGCG TGTCGTCATTCACGT CKO_01451 1404168 - 1404040 - | hypothetical protein CKO_01452 1404234 - 1404764 + | cytochrome b561 TERM 1782 1404777 - 1404793 + F 95 -11.5 -4.64861 | TGACTCTTCTCACCA CCCCGCG TAA TGCGGGG TTTCTTTTAGAAAAC TERM 1783 1404896 - 1404876 - f 74 -11.3 -2.79133 | opp_overlap 1404868 1404868 GAAGCGGGCAGTATA GCTATTTGT CAT ACAAATAGC GAGATGCTGCTGTTG CKO_01454 1404968 - 1405243 + | hypothetical protein TERM 1784 1405631 - 1405646 + G 80 -4.6 -5.06414 | opp_overlap 1405621 1405622, overlap 1405622 GTAAAGGGTTGATGC CGGATG GCAC CACCCG TTTTTCTTACAACGG CKO_01455 1405276 - 1406394 + | hypothetical protein TERM 1785 1406400 - 1406424 + F 87 -11.4 -3.84284 | overlap 1406401 TGATAACTGATTCAC ATGCCAGCGG GTCTG CCGCTGGCAC TTTCCTGAATTTTCA TERM 1786 1406401 - 1406423 + F 87 -14.9 -2.89848 | overlap 1406400 GATAACTGATTCACA TGCCAGCGG GTCTG CCGCTGGCA CTTTCCTGAATTTTC CKO_01456 1406564 - 1408252 + | hypothetical protein TERM 1787 1408298 - 1408262 - T 73 -10.2 -3.06261 | gap 1, opp_overlap 1408263 TTTTAAGTCTTAATA TTGCCGGGTAACGACGC TAAC GCGTC-TTATCCGGCAT TTATTTGAGGGCGCA TERM 1788 1408263 - 1408297 + T 100 -15.9 -4.41348 | gap 1, opp_overlap 1408262 TTTAAGTCTTAATAT TGCCGGGTAACGACGC TAAC GCGTC-TTATCCGGCA TTTATTTGAGGGCGC CKO_01457 1409238 - 1408315 - | hypothetical protein TERM 1789 1408832 - 1408854 + g 72 -4 -4.8269 | overlap 1408834 ATCGGGTTATTCATG GTGGCGACCT GTA ACGTCGTCTC TTTTTGCTGCTTATG CKO_01458 1409617 - 1410519 + | hypothetical protein CKO_01459 1410601 - 1411944 + | hypothetical protein CKO_01460 1411965 - 1413494 + | hypothetical protein CKO_01461 1413494 - 1413649 + | hypothetical protein TERM 1790 1413850 - 1413868 + G 70 -5.2 -4.43272 | overlap 1413852 1413856 CAGAGTCTGATATTG CAGATGGT CAA ACCGTCCG TTTTGACTTTTCCGT CKO_01462 1413768 - 1415393 + | glucan biosynthesis protein D TERM 1791 1415410 - 1415433 + F 100 -13.9 -4.37092 | CCGCTCTGTTGCCCC GAGCCGCCA CACTGC TGGCGGCTC TTTTCTCCCGACGAT CKO_01463 1415572 - 1415796 + | hypothetical protein TERM 1792 1415836 - 1415861 + F 79 -10.5 -3.54181 | opp_overlap 1415836 1415854, overlap 1415832 1415831 TTGTCCTGCTTAAAA GGGCTTCCT GACAGACA AGGAAGCCC TTCCTGTTTTCAGGT TERM 1793 1415861 - 1415836 - f 87 -10.5 -4.07568 | opp_overlap 1415836 1415832 1415831, overlap 1415854 TTGTCCTGCTTAAAA GGGCTTCCT GACAGACA AGGAAGCCC TTCCTGTTTTCAGGT TERM 1794 1416047 - 1416034 - g 72 -2.3 -4.85782 | GTGCTTAAAAACAAA GACTG GCTA CAGGC ATCGCTAAACTGGCC TERM 1795 1416308 - 1416324 + G 74 -7.9 -4.07306 | GCCATTATGCCGGGC GCGGCGA GCT TCGACGC TTTGTGATTAAATGT CKO_01464 1415938 - 1416483 + | ribosomal-protein-L7/L12-serine acetyltransferase CKO_01465 1417455 - 1416475 - | hypothetical protein TERM 1796 1417375 - 1417388 + g 72 -3.8 -4.77567 | AAGGGCAATGATCTG GCGT AGCAGG ACGC TTTTCTTGTGGCCGT TERM 1797 1417468 - 1417495 + H 72 -5 -4.58395 | gap 1 CATGGGGAATTTCCC TTTGCT-CGCTTA AGA TAACCGTAGCAAA TTTTTCAGCACTGGC CKO_01466 1417568 - 1418581 + | potassium-tellurite ethidium and proflavin transporter TERM 1798 1418842 - 1418857 + G 74 -3.2 -4.84311 | TTAACGCGTTAAGCT TCGAAG GCGA CTACGA TTTTATTCTCTCAAC CKO_01467 1418568 - 1419164 + | tellurite resistance protein TehB TERM 1799 1419209 - 1419180 - f 84 -13.6 -2.80994 | opp_overlap 1419175 1419173 CGCAATTTTACGATA GCGTTGCAGGCC TGATAC GGCCTGCAACTC GCCGTGTTGAATTTG TERM 1800 1419914 - 1419900 - g 70 -5.6 -4.45544 | opp_overlap 1419902, overlap 1419902 CCTGAGCAACGAAAA TACGCC GAT GGCGTT TGAAACGTTGAAAGA TERM 1801 1419912 - 1419902 - g 71 -8.2 -3.83437 | opp_overlap 1419902, overlap 1419900 TGAGCAACGAAAATA CGCC GAT GGCG TTTGAAACGTTGAAA CKO_01468 1419316 - 1419984 + | hypothetical protein TERM 1802 1420019 - 1419982 - T 80 -5.5 -5.0133 | opp_overlap 1419990, overlap 1419986 1419987 GATGTCGGTAAAAAA TAAGTTCACGCGCCATC TTCG GATGGCGCGTTTTTTTA TGCCGCCCGGCGACG TERM 1803 1419990 - 1420011 + T 100 -15.9 -5.60993 | opp_overlap 1419987 1419986 1419982 TAAAAAATAAGTTCA CGCGCCATC TTCG GATGGCGCG TTTTTTTATGCCGCC CKO_01469 1420925 - 1420017 - | hypothetical protein CKO_01470 1421119 - 1421994 + | hypothetical protein CKO_01471 1423137 - 1421971 - | hypothetical protein TERM 1804 1422766 - 1422744 - G 70 -2.7 -4.77719 | gap 2, overlap 1422746 1422747 CAAAACGCAATAAAA TACCGGCCAGC ATC GC-GGC-GGCA AGAGAATGCGGAATC CKO_01472 1423230 - 1423766 + | hypothetical protein TERM 1805 1425288 - 1425304 + G 76 -10.9 -3.73072 | AATCTCCCTGGCGCA CTGTTCG TGC CGAACAG TTTACTCAACCAGTT TERM 1806 1425744 - 1425730 - g 70 -7.1 -4.13014 | opp_overlap 1425733 CTCATATTCTGAAAA TGCCG TTGCC CGGCA GCGTTGTCGCCTCCG CKO_01473 1423845 - 1425806 + | hypothetical protein TERM 1807 1425861 - 1425803 - f 78 -5.4 -4.87318 | gap 4, opp_overlap 1425813, overlap 1425807 1425808 GCCAAAACGTAAAAA CTAAGT-CAGC-GGC-TGGCCGGG-AACGC TGA GCGTCACCCGGCCACGCCTGATGTACCTTA AACCCCCTCTCACCA TERM 1808 1425857 - 1425807 - f 84 -10.6 -3.85552 | gap 4, opp_overlap 1425813, overlap 1425803 1425808 AAACGTAAAAACTAA GT-CAGC-GGC-TGGCCGGG-AACGC TGA GCGTCACCCGGCCACGCCTGATGTAC CTTAAACCCCCTCTC TERM 1809 1425852 - 1425808 - f 79 -12.2 -2.89705 | opp_overlap 1425813, overlap 1425807 1425803 AACGTAAAAACTAAG TCAGCGGCTGGCCGGG-AACGC TGA GCGTCACCCGGCCACGC-CTGA TGTACCTTAAACCCC TERM 1810 1425813 - 1425849 + F 90 -15.2 -2.66733 | gap 2, opp_overlap 1425808 1425807 1425803 AAAAACTAAGTCAGC GGC-TGGCCGGG-AACGC TGA GCGTCACCCGGCCACGCC TGATGTACCTTAAAC TERM 1811 1425903 - 1425914 + GF 86 -7.2 -4.75308 | overlap 1425899 1425913 CCCGCAAAACTGGAA CCGG CTTT CCGG TTTTTGAGTGTTAAT TERM 1812 1425996 - 1425977 - g 100 -9.4 -5.11475 | opp_overlap 1425977 CAAAAAAAGAGAAAA GGTAAACA AAAA TGTTTACC TTATGGTTATAATAC CKO_01474 1425852 - 1426031 + | hypothetical protein CKO_01475 1425950 - 1426204 + | hypothetical protein TERM 1813 1426542 - 1426522 - g 75 -4 -4.8622 | gap 1, overlap 1426523 1426525 TCCTTGAATCAAAAA TCACGCAGC AGGA GCTG-GCGA GGCGCATTGGCAGAC CKO_01476 1426251 - 1426667 + | hypothetical protein CKO_01477 1426719 - 1428128 + | hypothetical protein CKO_01479 1428453 - 1428319 - | hypothetical protein TERM 1814 1428527 - 1428503 - gH 71 -7.7 -3.94933 | overlap 1428501 TGAAGGTGAAAAACA GCCCGTCTACA ACC CGGCGACGGGC GAGGTGATTCTGGAG TERM 1815 1429556 - 1429520 - gH 77 -11.7 -2.78816 | GGACGGCGCAGGATA CTATTTTGCGCCAAC GCTGCTG GCCGGCGCAAAACAG GAGGACGCCATCGTG CKO_01478 1428447 - 1429871 + | gamma-aminobutyraldehyde dehydrogenase TERM 1816 1429944 - 1429917 - fH 73 -11.4 -2.66098 | overlap 1429914 1429933 1429934 AAGATCGTAAATCGA TGGCAGAGAG GAGGAACG CTCTCTGCCA GTATGCGCAGCAAGC CKO_01480 1429947 - 1430126 + | hypothetical protein TERM 1817 1430225 - 1430213 - Tf 88 -3.3 -5.78622 | GTACGTCAAAAAAAA GAGCA TAT TGCGC GCGTTTTTCCCCTCT TERM 1818 1430268 - 1430281 + GT 74 -2.4 -5.02074 | CGAAATGTCGCTCTA CCAA AAAATG TTGG TTTTTTACGCAGTGA CKO_01482 1430495 - 1430286 - | hypothetical protein CKO_01481 1430248 - 1430430 + | hypothetical protein TERM 1819 1430470 - 1430521 + gT 85 -4.2 -5.252 | opp_overlap 1430443 GGCGAGCGCCTTATC CGGCTTACGATGTTGCGTAGCGCC ATCA GGCATTGAGCAGCGCCATCAGCCG TTTTTTGTCGGCGTC CKO_01483 1432657 - 1430495 - | hypothetical protein TERM 1820 1431824 - 1431805 - G 70 -10 -3.38768 | gap 1, opp_overlap 1431808 CGACAGGATGTACAA CGACGTCGC TCT GCG-CGTCG TTGCCGGATAACGCG CKO_01484 1435635 - 1432654 - | hypothetical protein TERM 1821 1434175 - 1434161 - G 74 -4.2 -4.7373 | TTACGGGAGGAAAAA TCCTCA TCC TGCGGA TGCCAGCCCATCGCT TERM 1822 1434432 - 1434418 - G 88 -11.4 -4.08216 | GTACTGCGGCGAAAA GACCGG TAA CCGGTC ATCAGGCGGCAGGCT CKO_01485 1436971 - 1435640 - | hypothetical protein TERM 1823 1436055 - 1436065 + g 80 -4.6 -5.08824 | ACCACCGGTTCATCT GCGG GCT TCGC TTTTTTCACTGGCGG CKO_01486 1437236 - 1438852 + | hypothetical protein CKO_01487 1438870 - 1439103 + | hypothetical protein TERM 1824 1439189 - 1439150 - gT 71 -10.7 -2.5955 | gap 1, overlap 1439146 AGGCCGGATAAGGCA TTTAC-GCCGCGCCGCCG CCATC CGGCGAAGCGGCAGTTAA AACTGGCGTCTGGCG CKO_01489 1439635 - 1439186 - | hypothetical protein CKO_01488 1439129 - 1439266 + | hypothetical protein CKO_01490 1440150 - 1439632 - | hypothetical protein CKO_01491 1440188 - 1440763 + | hypothetical protein TERM 1825 1441384 - 1441370 - g 70 -3.4 -4.82901 | opp_overlap 1441383, overlap 1441371 GGCGGCGCAGAAAAA TGCCGC TAC GCGACC GAGATTCTCGGTTTT TERM 1826 1441383 - 1441395 + G 80 -9.1 -4.1721 | opp_overlap 1441370 AATGCCGCTACGCGA CCGAG ATT CTCGG TTTTGACATATGCCT TERM 1827 1441784 - 1441772 - g 71 -4.7 -4.62783 | opp_overlap 1441772 1441773, overlap 1441773 GACGGACTGGAAAAA GCGCC GGG GGCGT TTATCGGTCTGCTGA TERM 1828 1441773 - 1441783 + G 74 -8.2 -3.95787 | opp_overlap 1441773 1441772, overlap 1441772 ACGGACTGGAAAAAG CGCC GGG GGCG TTTATCGGTCTGCTG CKO_01492 1440788 - 1441849 + | hypothetical protein TERM 1829 1441877 - 1441897 + T 100 -12.6 -5.91981 | opp_overlap 1441877 CATGACATTAAAAAA TAGCGGGG CGATT CCCCGCTA TTTTTTTTAGCTTTT TERM 1830 1441897 - 1441877 - T 100 -12.6 -5.23316 | opp_overlap 1441877 CATGACATTAAAAAA TAGCGGGG CGATT CCCCGCTA TTTTTTTTAGCTTTT CKO_01493 1444049 - 1441926 - | hypothetical protein TERM 1831 1442389 - 1442406 + g 77 -4 -5.05601 | overlap 1442378 1442384 1442391 AATTCCGCACCCTGG CGGCGG GTTTTA CCGGCG TTTTTATATGTGGTG CKO_01494 1444414 - 1445376 + | hypothetical protein TERM 1832 1445434 - 1445403 - T 100 -20.4 -3.27298 | opp_overlap 1445410, overlap 1445410 CGCTGTAAGCATTAA GTAAAAAGGAGGGG CAAG CCCCTCCTTTTTAC TGCGTAACAACATCC TERM 1833 1445427 - 1445410 - T 100 -12.7 -4.90869 | opp_overlap 1445410, overlap 1445403 AGCATTAAGTAAAAA GGAGGGG CAAG CCCCTCC TTTTTACTGCGTAAC TERM 1834 1445410 - 1445427 + T 100 -12.7 -4.7497 | opp_overlap 1445410 1445403 AGCATTAAGTAAAAA GGAGGGG CAAG CCCCTCC TTTTTACTGCGTAAC CKO_01495 1447106 - 1445481 - | hypothetical protein TERM 1835 1447158 - 1447179 + H 72 -6.5 -4.24948 | overlap 1447175 AAAACATACCCGGAA GCACAGCGT TAAG ACGTCGTGC TTTTACGTGTGGTCA CKO_01496 1447277 - 1447894 + | hypothetical protein CKO_01497 1449027 - 1447924 - | hypothetical protein TERM 1836 1448085 - 1448097 + g 79 -3.3 -5.1523 | overlap 1448086 GGTGAGGGATCGCCG CCGCT TCC AGCGC TTTTTGTATTCTCGC TERM 1837 1448176 - 1448154 - G 85 -7 -4.86731 | opp_overlap 1448167, overlap 1448157 TCGCGTCAAACAAAA TAACAGCGAA CTC TTCGCCGCCA TAGCGGGCGGCCACA TERM 1838 1448173 - 1448157 - G 89 -8.7 -4.54026 | opp_overlap 1448167, overlap 1448154 CGTCAAACAAAATAA CAGCGAA CTC TTCGCCG CCATAGCGGGCGGCC CKO_01498 1449542 - 1449081 - | hypothetical protein CKO_01499 1449885 - 1450730 + | hypothetical protein CKO_01500 1451500 - 1450820 - | hypothetical protein TERM 1839 1451351 - 1451399 + g 84 -13.3 -3.04792 | opp_overlap 1451350 1451353, overlap 1451354 CAGGTTTGACCATAG CACCATGCCGCGTTT-GTCCAGC ATCTG GCTGGACGAGGCGCGCCA-GGTG TATTGCCCGTAGTCA CKO_01501 1452192 - 1451497 - | hypothetical protein CKO_01502 1453736 - 1452192 - | hypothetical protein CKO_01503 1457473 - 1453733 - | hypothetical protein TERM 1840 1455075 - 1455062 - G 74 -6.7 -4.25056 | opp_overlap 1455066 CAGCGGATGAATAAA CGGAT GCAT ATCCG AGGTATTCATGTCGT TERM 1841 1457187 - 1457206 + g 83 -12.8 -3.27298 | CAGGAATAACTGGCG CCGCGTGG GCAG CCGCGCGG TTCATGATTAGGCAG TERM 1842 1457524 - 1457560 + r 77 -10.8 -3.30243 | gap 1, opp_overlap 1457524 TTGTAGGCCGGATAA GGCGCTGCGCGATTGCC TGAT GGCGA-CGCCCGGCGTC TTATCCGGCCTACGT CKO_01504 1458992 - 1457598 - | hypothetical protein TERM 1843 1459046 - 1459059 + r 76 -5.2 -4.7339 | opp_overlap 1459046 1459038 AAATAAGTCCAGGAA GGGC GCGCGA GCCC TTTTTAGAATTTATT CKO_01505 1459786 - 1459208 - | hypothetical protein TERM 1844 1459377 - 1459401 + g 93 -12.1 -4.24342 | overlap 1459378 AATTCTCCTGCCTCC TGACCGCCTTC AAT GATGGCGGTCG TTTCTTCATGCCACA TERM 1845 1459378 - 1459400 + g 84 -13.4 -3.14284 | overlap 1459377 ATTCTCCTGCCTCCT GACCGCCTTC AAT GATGGCGGTC GTTTCTTCATGCCAC TERM 1846 1459882 - 1459828 - H 80 -5.8 -5.08601 | gap 1, opp_overlap 1459829 1459859, overlap 1459829 GCAGTGTAACAAAAA GCTGGACATGCGTTCAACTTTC-CG TAGGAT CGCGAGAGTTGAACACGTGTTCAGT TTTTGCTTTCAAAGG TERM 1847 1459829 - 1459881 + H 100 -13.7 -4.98531 | gap 1, opp_overlap 1459828 1459829, overlap 1459859 CAGTGTAACAAAAAG CTGGACATGCGTTCAACTTTC-CG TAGGAT CGCGAGAGTTGAACACGTGTTCAG TTTTTGCTTTCAAAG TERM 1848 1459881 - 1459829 - H 72 -9.3 -3.64438 | gap 1, opp_overlap 1459829 1459859, overlap 1459828 CAGTGTAACAAAAAG CTGGACATGCGTTCAACTTTC-CG TAGGAT CGCGAGAGTTGAACACGTGTTCAG TTTTTGCTTTCAAAG TERM 1849 1460248 - 1460270 + G 71 -6.3 -4.37092 | overlap 1460251 TGATTGTTCCGGCGA CGCTGGC-CGG TAT CCGCGCCA-CG TTTTCTGAGGCCCGT TERM 1850 1461070 - 1461057 - g 72 -3.7 -4.82901 | overlap 1461058 GCGCCCGCAGAAAAA GCGGC GGCG GCCGG GGCAATAGAAACCAT CKO_01506 1459905 - 1461392 + | hypothetical protein CKO_01507 1461564 - 1461394 - | hypothetical protein TERM 1851 1461897 - 1461877 - R 100 -10.4 -5.25799 | AAAACAAGATAAAAA GCCAGCCC GCTAT GGACTGGC TTAGAATTACGCTAC CKO_01508 1462993 - 1461920 - | hypothetical protein CKO_01509 1463289 - 1463408 + | hypothetical protein CKO_01510 1463317 - 1463412 + | hypothetical protein CKO_01512 1464443 - 1463562 - | hypothetical protein TERM 1852 1463603 - 1463591 - Gf 74 -6.9 -4.3255 | TCGCTAACCAACAAA GCAGG GAA CCCGC ACACACCATAACCGC TERM 1853 1464077 - 1464091 + gF 95 -5.7 -5.31456 | opp_overlap 1464077 CAATTAATCCAGGAA CAACC AGCCA GGTTG TTTTTTGTCCATTGA TERM 1854 1464342 - 1464326 - Gf 87 -10.1 -4.20516 | overlap 1464328 CGCTTAGCGAATAAA TAGCGGC GGC GCCGCCA ACAGGCCCAAGTCCT TERM 1855 1464340 - 1464328 - Gf 83 -10.5 -3.70307 | overlap 1464326 CTTAGCGAATAAATA GCGGC GGC GCCGC CAACAGGCCCAAGTC CKO_01511 1464432 - 1464602 + | hypothetical protein TERM 1856 1465693 - 1465668 - fH 70 -2.5 -5.06451 | overlap 1465669 1465670 1465686 TACGACGCCAAAAAA CGCCAGTATGA CAAG TCATCCTGGAA CTATCAGTTCGACGA TERM 1857 1466236 - 1466208 - fH 72 -8.1 -3.73775 | GTCAGTCTGATGAAA TCGTTCTACGGCG ATG CGGCGCAGAAAGA GAATGACTGGGGCTT TERM 1858 1467788 - 1467812 + G 71 -10.8 -3.28791 | gap 1, opp_overlap 1467784 1467783 CTGCAACAAACCCGA TCACGCCGCCT CCCC AGGCG-CGTGA TTATAAAGCGGAAGT CKO_01514 1467739 - 1468623 + | hypothetical protein TERM 1859 1468755 - 1468805 + G 100 -8.8 -4.84359 | opp_overlap 1468753 1468752 GGCTGACGCAAACCT TCGGGACGCCGCAGATGGGGCGTA TTT TGCACCCGTTCTTCGGCGTAGCGA TTTTTGTCGCACTGA CKO_01515 1468616 - 1469272 + | formate dehydrogenase-N subunit gamma TERM 1860 1469315 - 1469288 - T 82 -11.4 -3.63744 | opp_overlap 1469293, overlap 1469293 CCCGCTTTCAAAAGA CAAAAGCGCTAC GTCT GTAGCGCTTTTT TTTGCCAACAGAATG CKO_01516 1469404 - 1469264 - | hypothetical protein TERM 1861 1469293 - 1469310 + g 100 -11.3 -5.75342 | opp_overlap 1469288 1469293 TTTCAAAAGACAAAA GCGCTAC GTCT GTAGCGC TTTTTTTTGCCAACA TERM 1862 1469310 - 1469293 - G 100 -11.3 -4.89567 | opp_overlap 1469293, overlap 1469288 TTTCAAAAGACAAAA GCGCTAC GTCT GTAGCGC TTTTTTTTGCCAACA TERM 1863 1469403 - 1469376 - G 71 -9.8 -3.48517 | gap 1, overlap 1469374 1469372 1469377 ACCGTATAAAACACA GGCCCGGTAAGCG TAG CGC-CACCGGGCA AACACTCAGATAGAG TERM 1864 1469402 - 1469377 - G 78 -13.3 -2.68387 | gap 1, overlap 1469376 1469374 1469372 CCGTATAAAACACAG GCCCGGTAAGCG TAG CGC-CACCGGGC AAACACTCAGATAGA CKO_01517 1471106 - 1469409 - | malate dehydrogenase TERM 1865 1470323 - 1470351 + g 70 -3 -4.82901 | AAGAGCAGATTTCAT CGCGATAGCGAT TAAGC AGCGGCATCGCG TTTTTCTGCGCGAAA TERM 1866 1470809 - 1470825 + g 74 -7.3 -4.08767 | overlap 1470810 TATAGATAACCGGCA TCATCTC ATC GAGATGG TTTTGCACCAGTCGG TERM 1867 1470925 - 1470941 + g 70 -9.4 -3.69283 | CCCTGATACTGGATC CAGGCG CGCTC CGCCTG TTCTTCAATCGATTC CKO_01518 1471264 - 1471112 - | hypothetical protein TERM 1868 1471253 - 1471232 - G 100 -13.1 -4.8622 | opp_overlap 1471232 TTTTGTAAGCAAAAA CACCATTGC GGTT GCAATGGTG TTTATCGTCATATCA TERM 1869 1471232 - 1471253 + g 93 -13.1 -4.00782 | opp_overlap 1471232 TTTTGTAAGCAAAAA CACCATTGC GGTT GCAATGGTG TTTATCGTCATATCA TERM 1870 1471977 - 1471953 - g 83 -10.8 -3.93695 | gap 1, opp_overlap 1471960 GGCATTATTCAGAAA GCGAAAGCCGG ATGC CCGG-TTTCGC AGGTGCTGAAAGCGG CKO_01519 1471593 - 1472024 + | hypothetical protein CKO_01520 1473069 - 1472125 - | hypothetical protein TERM 1871 1472840 - 1472868 + g 70 -6.6 -4.19506 | gap 1, overlap 1472844 CCGGTGCGCGCAACG CCAGGCCGCGAGC ACTC GC-CGTGGCTGGG TTTTAACATTCCCAT CKO_01521 1474048 - 1473062 - | hypothetical protein CKO_01522 1474941 - 1474045 - | ATP-dependent peptide transporter membrane subunit CKO_01523 1475960 - 1474938 - | hypothetical protein CKO_01524 1477567 - 1476005 - | hypothetical protein TERM 1872 1476047 - 1476073 + g 71 -5.8 -4.24342 | opp_overlap 1476058 GACCTGTTCCAGCAT GGGGTTGAAGAC AAA GCCTTTGACCTC TTTGTTCATCGCCAG CKO_01525 1478171 - 1477584 - | D-alanyl-D-alanine dipeptidase CKO_01526 1479052 - 1478186 - | hypothetical protein TERM 1873 1478605 - 1478591 - G 71 -4.2 -4.59109 | CAGATGGCTGAAAAA GGCGTT AGC AATGCC GCGCGTGGACTGAAT TERM 1874 1478725 - 1478765 + g 91 -14.1 -3.02144 | gap 1, overlap 1478729 TGGCATCAATTTCCA GCGACAGCGACTGACGCG CTCTGT CGGG-CAGTCGCTGTTGC TGTTGCCAGGAGTCA TERM 1875 1478729 - 1478761 + g 70 -9.9 -3.36273 | gap 1, overlap 1478725 ATCAATTTCCAGCGA CAGCGACTGACGCG CTCTGT CGGG-CAGTCGCTG TTGCTGTTGCCAGGA TERM 1876 1479136 - 1479150 + r 88 -5.6 -5.5074 | opp_overlap 1479135 1479138, overlap 1479138 TGCCAACCTGGAAAC CACGGC ATC GCCGTC TTTTTTGTTAAATTA TERM 1877 1479138 - 1479148 + r 81 -8.2 -4.37495 | opp_overlap 1479138 1479135, overlap 1479136 CCAACCTGGAAACCA CGGC ATC GCCG TCTTTTTTGTTAAAT CKO_01527 1479352 - 1479206 - | hypothetical protein TERM 1878 1479316 - 1479305 - G 75 -5.8 -4.59773 | TTGCAGGGTCAAAAA TGGC AAAC GCCA ACGTGGATAGCAGAG CKO_01529 1479807 - 1479631 - | hypothetical protein TERM 1879 1479877 - 1479892 + GH 77 -11.8 -2.78813 | overlap 1479876 TGCCATTATGCTCTG GCGCGG TCAG CCGCGC GTTGTTGAGATCAAC TERM 1880 1480094 - 1480117 + GH 95 -14.6 -3.53343 | overlap 1480085 ATCATTACCGGCGGC GGCATCTGGC CGGA GCCGGATGCC TTTACGCCCGGCATT CKO_01528 1479779 - 1481722 + | hypothetical protein TERM 1881 1481738 - 1481768 + FH 100 -17 -3.52102 | opp_overlap 1481744 1481755, overlap 1481739 1481741 1481744 TTTTCTCTCTCCCTC ACAGAACGTCTGCA AAT TGCAGACGTTCTGC TTGTGTCAGTCAGAT TERM 1882 1481739 - 1481767 + FH 100 -20.5 -2.7094 | opp_overlap 1481744 1481755, overlap 1481738 1481741 1481744 TTTCTCTCTCCCTCA CAGAACGTCTGCA AAT TGCAGACGTTCTG CTTGTGTCAGTCAGA TERM 1883 1481741 - 1481765 + FH 100 -17.3 -2.89793 | opp_overlap 1481744 1481755, overlap 1481739 1481738 1481744 TCTCTCTCCCTCACA GAACGTCTGCA AAT TGCAGACGTTC TGCTTGTGTCAGTCA TERM 1884 1481744 - 1481762 + FH 90 -13.2 -3.59023 | opp_overlap 1481744 1481755, overlap 1481741 1481739 1481738 CTCTCCCTCACAGAA CGTCTGCA AAT TGCAGACG TTCTGCTTGTGTCAG TERM 1885 1481762 - 1481744 - fH 90 -13.2 -3.48276 | opp_overlap 1481741 1481739 1481738 1481744, overlap 1481755 CTCTCCCTCACAGAA CGTCTGCA AAT TGCAGACG TTCTGCTTGTGTCAG CKO_01530 1481924 - 1482241 + | hypothetical protein TERM 1886 1482813 - 1482793 - g 71 -9.6 -3.52113 | TGTCAAAATTCACAA CCTCGCCG TTAGC CGGCGCGG AAAGCTGGCTGGTCA CKO_01531 1482234 - 1483502 + | hypothetical protein CKO_01532 1484640 - 1483543 - | hypothetical protein TERM 1887 1485442 - 1485467 + G 72 -11.9 -2.64681 | overlap 1485434 1485441 1485440 1485438 ATTGCCAGGCCGTTA CGGCGCTGTAT GAGC GTATAGCGCCG CTGTCTTTGTCTTCC TERM 1888 1485923 - 1485912 - g 70 -3 -4.74453 | opp_overlap 1485915, overlap 1485914 GAATACATTGAAAAA TTTC GGCA GAAA GGGCTGCCGTTTTGT TERM 1889 1485915 - 1485932 + G 83 -8.4 -4.52589 | opp_overlap 1485912 1485914 TACATTGAAAAATTT CGGCAG AAAGGG CTGCCG TTTTGTATCCCGGAG CKO_01533 1485054 - 1486613 + | hypothetical protein CKO_01534 1486610 - 1488145 + | hypothetical protein CKO_01535 1489428 - 1488142 - | hypothetical protein TERM 1890 1488721 - 1488738 + g 78 -6.3 -4.68424 | gap 1 AATAACAATATCCTC GCCAGGTT TAT AACC-GGC TTTTTCGATCGCTTC CKO_01536 1489872 - 1489444 - | hypothetical protein CKO_01537 1490386 - 1491165 + | hypothetical protein TERM 1891 1491192 - 1491210 + T 93 -8.8 -4.7497 | overlap 1491193 GGTCCCATCGGCTTA TCCGGTCA CAG TGGCCGGG TTTTTAATGCGTGCG TERM 1892 1491193 - 1491209 + T 73 -10.1 -3.445 | overlap 1491192 GTCCCATCGGCTTAT CCGGTCA CAG TGGCCGG GTTTTTAATGCGTGC CKO_01538 1492036 - 1491524 - | hypothetical protein TERM 1893 1491684 - 1491697 + g 73 -5.3 -4.56775 | TGCTCCTTATGCCTT GCTAT CTCG ATAGC TTTTTCGAAAAGAAT TERM 1894 1492577 - 1492595 + G 74 -4.4 -4.8048 | opp_overlap 1492569 1492570 1492577, overlap 1492579 AATAAATCCGCGAAA GCCCGAGG CAC CCTCGCCC TTTTTAATATAGACA CKO_01539 1492280 - 1492993 + | hypothetical protein CKO_01540 1493229 - 1493606 + | hypothetical protein TERM 1895 1493757 - 1493742 - T 100 -11.8 -5.17488 | AACATGAAAACAAAA CCCGGC CGCA GCCGGG TCAGATGATTAGCAC CKO_01541 1495217 - 1493766 - | altronate oxidoreductase TERM 1896 1494039 - 1494024 - G 73 -6.1 -4.4891 | TTCACCACGATAAAA TGCGG TCAGCG CCGCA AGCGCAAACGTCAGG TERM 1897 1494892 - 1494874 - G 79 -3 -5.23292 | TTAGAGAAAACAAAA CGCATGTC CGG GTTATGCG CCAGTTTCAGGAATT TERM 1898 1495009 - 1494994 - G 70 -9 -3.64703 | CCCTTTTCATTCAAA CCACGA ATAA TCGTGG TATAGAGCCCATCCT CKO_01542 1495726 - 1495367 - | hypothetical protein CKO_01543 1496640 - 1495726 - | glutaminase CKO_01544 1498305 - 1496716 - | hypothetical protein CKO_01545 1499796 - 1498408 - | hypothetical protein CKO_01546 1499901 - 1500767 + | hypothetical protein CKO_01547 1500777 - 1501793 + | hypothetical protein TERM 1899 1501791 - 1501835 + F 77 -7.3 -4.50627 | opp_overlap 1501797, overlap 1501797 1501798 ATCGCAAAACTCCCC TGAATACGGTGTCCGGG-ATG ATTTC CATACCCGGACGCCAT-TTCG TTTGTTTCATCAATC TERM 1900 1501830 - 1501797 - f 73 -10.3 -3.0264 | gap 1, opp_overlap 1501791 1501797 1501798 AAACTCCCCTGAATA CGGTGTCCGGG-ATGA TTT CCATACCCGGACGCCA TTTCGTTTGTTTCAT TERM 1901 1501797 - 1501830 + F 87 -9.6 -4.28115 | gap 1, opp_overlap 1501797, overlap 1501791 1501798 AAACTCCCCTGAATA CGGTGTCCGGG-ATG ATTTC CATACCCGGACGCCA TTTCGTTTGTTTCAT TERM 1902 1501798 - 1501829 + F 83 -13.1 -3.15242 | gap 1, opp_overlap 1501797, overlap 1501797 1501791 AACTCCCCTGAATAC GGTGTCCGGG-ATG ATTTC CATACCCGGACGCC ATTTCGTTTGTTTCA TERM 1903 1502173 - 1502209 + G 85 -8.8 -4.48583 | gap 1 CTTTATGTTGCTGAC CAGCCAGGTTGAGCGGC GTAA GCTGCT-AATCTGCCTG TTTGTTCTCTTCATT CKO_01548 1501958 - 1503151 + | sugar efflux transporter TERM 1904 1503178 - 1503218 + T 72 -6.3 -4.35091 | gap 1, opp_overlap 1503185, overlap 1503180 1503185 AATAAAATGACTTTT TTA-TAAAGGGCCAGAGC AGGTAA GTTCTGGCCCTTTACTCG TTTCTTATCAATGTT TERM 1905 1503180 - 1503215 + T 81 -12.7 -3.1541 | opp_overlap 1503185, overlap 1503178 1503185 TAAAATGACTTTTTT ATAAAGGGCCAGAGC AGGTAA GTTCTGGCCCTTTAC TCGTTTCTTATCAAT TERM 1906 1503210 - 1503185 - T 84 -10.4 -3.86346 | opp_overlap 1503180 1503178 1503185 TGACTTTTTTATAAA GGGCCAGAGC AGGTAA GTTCTGGCCC TTTACTCGTTTCTTA TERM 1907 1503185 - 1503210 + T 95 -12.6 -3.92804 | opp_overlap 1503185, overlap 1503180 1503178 TGACTTTTTTATAAA GGGCCAGAGC AGGTAA GTTCTGGCCC TTTACTCGTTTCTTA CKO_01549 1503634 - 1503500 - | hypothetical protein TERM 1908 1503761 - 1503779 + r 100 -8.8 -5.75538 | opp_overlap 1503761 CTTCAAAAATAAAAA CCACCGCT ACC AACGGTGG TTTTTATTTTTTCAG TERM 1909 1503779 - 1503761 - R 100 -11 -5.61881 | opp_overlap 1503761 CTTCAAAAATAAAAA CCACCGCT ACC AACGGTGG TTTTTATTTTTTCAG CKO_01550 1504475 - 1503810 - | multiple drug resistance protein MarC TERM 1910 1504822 - 1504801 - g 81 -2.3 -5.37345 | gap 1 GTCAATCAGAAAAAA GATCGTCTGT TGA AC-GACTATC TGTCGCCGCTGGATA TERM 1911 1505040 - 1505005 - g 100 -14.8 -4.02736 | gap 1, opp_overlap 1505002, overlap 1504993 AATCCACATGACAAA CGCGGCGTGCT-GGTGA AGC TCACCGAACACGGCGCG GCAATTTGTGAGCAA CKO_01551 1504726 - 1505160 + | DNA-binding transcriptional repressor MarR CKO_01554 1505745 - 1505440 - | hypothetical protein CKO_01552 1505173 - 1505562 + | DNA-binding transcriptional activator MarA CKO_01553 1505614 - 1505811 + | hypothetical protein TERM 1912 1505821 - 1505838 + Tr 100 -14.1 -5.63504 | overlap 1505834 CTGTAATTCGTTTTT GCCCCGC CACT GCGGGGC TTTTTTTATCCCCTT CKO_01555 1506743 - 1505844 - | O-acetylserine/cysteine export protein CKO_01556 1506878 - 1507042 + | hypothetical protein TERM 1913 1507431 - 1507443 + GT 71 -7.7 -3.91087 | overlap 1507437 ATCAACCTGCCGTTC TGGCT TGC AGCCA TTTGCTCTGCTTTCC CKO_01557 1506939 - 1508126 + | putative MFS-type transporter YdeE CKO_01558 1508871 - 1508173 - | hypothetical protein CKO_01559 1509681 - 1508881 - | hypothetical protein TERM 1914 1509217 - 1509180 - G 71 -9.8 -3.53012 | overlap 1509160 1509183 TTTGTCCGTGCGAAA GCAGCCC-GGCGCGACGC CCAC GCTCCGCGCCCAGGC-GC AATAGCCCGAGCATC TERM 1915 1509215 - 1509183 - G 71 -11.2 -2.90496 | gap 1, overlap 1509180 GTCCGTGCGAAAGCA GCCC-GGCGCGACGC CCAC GCTCCGCGCCCAGGC GCAATAGCCCGAGCA TERM 1916 1509438 - 1509458 + g 77 -8.1 -4.12188 | ACTGATCGTAAATCG CGCGTCCGC TTT GCGGCCGGG TTTTACCGGTAATCA CKO_01560 1510751 - 1509678 - | hypothetical protein CKO_01561 1512325 - 1510751 - | hypothetical protein TERM 1917 1511132 - 1511142 + g 87 -8.2 -4.63932 | overlap 1511127 CGCGCGAACGCGCAT CCCG AGG CGGG TTTTATTCAGCAATA TERM 1918 1512026 - 1512040 + g 79 -2.8 -5.15969 | CAGGTTTCGCAGACG GTTAGT CAG ACGAAC TTTTTTCAGTTCGCC TERM 1919 1512366 - 1512343 - R 77 -11 -3.29043 | AAGTGTTCTCCAGAA TGTGCCCTCC CGCA GGAGGGCAAA AGATCAGTTGCTGGC CKO_01562 1513641 - 1512370 - | hypothetical protein TERM 1920 1512613 - 1512627 + g 91 -7.8 -4.9218 | GCGGACTTTATCGAC GTCGGT CGT ACCGGC TTTTTCTACTGCCTG TERM 1921 1513885 - 1513857 - R 84 -10.4 -4.00868 | opp_overlap 1513859 TGATCCAGAATGAAA CAGCGTTGCA TTACGAATG TGCAACGCTG TGTAACAAAGAGAGG CKO_01563 1515008 - 1513905 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 1922 1514159 - 1514148 - G 74 -7.2 -4.15044 | overlap 1514149 TCCGGGCCGAACAAA GCGC AGCG GCGC GAAATCACCGGAGCG TERM 1923 1514694 - 1514708 + g 93 -11.4 -4.52589 | CAGTTTTCCGGTAAC GCGCAC GCC GTGCGC TTTTGTCTGCACGCC TERM 1924 1514829 - 1514791 - G 74 -4.4 -4.72863 | overlap 1514792 1514812 TCAAAGAAATCAAAA TGCCACCAGGCGCGGCGA AAC TCGCCATCCGTGACGACA TGCAGCCCGCAGGCA TERM 1925 1515460 - 1515492 + H 100 -10.6 -5.40072 | gap 1, opp_overlap 1515461, overlap 1515461 AGCTCCTCACCGACA AGGCCCCTTGTAGCG TAAC TGC-ACAAGGGGCCA TTTTTTTACCCGCCC TERM 1926 1515491 - 1515461 - H 86 -13.4 -3.35679 | gap 1, opp_overlap 1515460 1515461 GCTCCTCACCGACAA GGCCCCTTGTAGC GTAACT GC-ACAAGGGGCC ATTTTTTTACCCGCC TERM 1927 1515461 - 1515491 + H 100 -14.1 -3.83561 | gap 1, opp_overlap 1515461, overlap 1515460 GCTCCTCACCGACAA GGCCCCTTGTAGCG TAAC TGC-ACAAGGGGCC ATTTTTTTACCCGCC TERM 1928 1515545 - 1515527 - H 100 -9.5 -6.06529 | GACAGACAAAAAAAA CCGCCGG ATAAA CCAGCGG TGAATGCTTGCATGG CKO_01564 1515549 - 1515731 + | hypothetical protein CKO_01565 1516677 - 1515766 - | hypothetical protein TERM 1929 1516055 - 1516030 - G 70 -6.7 -4.11281 | opp_overlap 1516038 GATGATAATCACAAA CTCCTCCCCGC CATA GCGGTAAGGCG TTTCATCGTAGCGCG TERM 1930 1516632 - 1516643 + g 93 -4.4 -5.58074 | CTAACAAGATGGTAT CGAT TTCT ATCG TTTTTTTAATCATTG CKO_01567 1518017 - 1516839 - | hypothetical protein CKO_01566 1517971 - 1518099 + | hypothetical protein TERM 1931 1518214 - 1518176 - TR 84 -5.2 -5.30686 | overlap 1518177 1518179 AACATTGACAAAAAA TCAGAGCGTTGCCTGA TAAACAT TCAGGCAGCGCCCTTG CGCTTAGCGGTCTAA TERM 1932 1518213 - 1518177 - TR 72 -8.7 -3.76785 | overlap 1518176 1518179 ACATTGACAAAAAAT CAGAGCGTTGCCTGA TAAACAT TCAGGCAGCGCCCTT GCGCTTAGCGGTCTA TERM 1933 1518211 - 1518179 - TR 79 -11.3 -3.45403 | overlap 1518177 1518176 ATTGACAAAAAATCA GAGCGTTGCCTGA TAAACAT TCAGGCAGCGCCC TTGCGCTTAGCGGTC CKO_01568 1520263 - 1518218 - | dipeptidyl carboxypeptidase II CKO_01569 1520353 - 1521147 + | 3-hydroxy acid dehydrogenase CKO_01570 1521235 - 1521921 + | hypothetical protein CKO_01571 1522087 - 1521908 - | hypothetical protein CKO_01572 1523501 - 1522029 - | hypothetical protein TERM 1934 1523173 - 1523147 - GR 74 -8.6 -3.96216 | opp_overlap 1523171, overlap 1523148 TCGTCAGGGAAACAA TCGCCACCTGCG GCT CGCACATGGCGG CCAGGACGGTTTCCA TERM 1935 1523172 - 1523148 - GR 78 -12.1 -2.97408 | opp_overlap 1523171, overlap 1523147 CGTCAGGGAAACAAT CGCCACCTGCG GCT CGCACATGGCG GCCAGGACGGTTTCC TERM 1936 1523202 - 1523214 + gr 86 -6.9 -5.00616 | overlap 1523201 CAGACCGTCAACCTG CGCGT GCA GCGCG TTTTTTACCACCCCA CKO_01573 1525056 - 1523677 - | hypothetical protein CKO_01574 1526129 - 1525110 - | putative dehydrogenase CKO_01575 1527357 - 1526143 - | hypothetical protein TERM 1937 1526825 - 1526835 + g 71 -8.2 -3.91798 | CAGAGTTGCTCTTCC GGCC ACT GGCC TTTCGTTGCGGGTTC TERM 1938 1527257 - 1527293 + g 70 -7.1 -4.11216 | overlap 1527258 1527260 CGGCCATTCAGGGTA GCGTCGCCCAGGCCGGT GAT ACCGTCCTCGGTGGTGA TTTTCAGCGTGACAA TERM 1939 1527477 - 1527462 - R 76 -7.5 -4.35042 | overlap 1527459 TCGATCACAAAATAA GGCGC TTAAGC GCGCC CCCACCCGGCAACGA CKO_01576 1527802 - 1527467 - | hypothetical protein CKO_01577 1527939 - 1528280 + | hypothetical protein CKO_01578 1528315 - 1528875 + | hypothetical protein CKO_01579 1529650 - 1528880 - | hypothetical protein CKO_01580 1529718 - 1530026 + | hypothetical protein TERM 1940 1530056 - 1530031 - f 81 -12.7 -3.13639 | opp_overlap 1530034, overlap 1530034 AACCTCAGTAACAGA TAAGAGCCTGA TATA CCAGGCTCTTA CTCCCTCTTAGAAAG TERM 1941 1530053 - 1530034 - f 79 -10 -3.70722 | opp_overlap 1530034, overlap 1530031 CTCAGTAACAGATAA GAGCCTGA TATA CCAGGCTC TTACTCCCTCTTAGA TERM 1942 1530884 - 1530872 - g 77 -7.7 -4.2349 | opp_overlap 1530871 CTCCGATATCGAAAA CACCA AAC TGGTG GTGATGTTCGGTAAT TERM 1943 1531178 - 1531156 - g 78 -2.6 -5.1861 | GTTACGACGAAAAAA CGCTACCG GCCGATG CGCCAGCG AATGGCCACTATAAA TERM 1944 1531514 - 1531481 - g 70 -6.7 -4.13767 | GCCGTTACCGGAAAA CCCGGTAAAAACGCA GATC TCCGTGTTTACCTGG ACGGACGCCATTGCC TERM 1945 1532050 - 1532023 - g 89 -3.4 -5.44721 | overlap 1532025 ACGAGCTGAAAAAAA TAGGGATCTACA AGCG TAAAGATCCCAA CGGCCATTTCGTGGC TERM 1946 1532048 - 1532025 - g 71 -6 -4.36089 | overlap 1532023 GAGCTGAAAAAAATA GGGATCTACA AGCG TAAAGATCCC AACGGCCATTTCGTG CKO_01581 1530198 - 1532627 + | hypothetical protein TERM 1947 1532632 - 1532667 + F 78 -12 -3.03243 | overlap 1532634 1532635 1532658 AGAAAGTGTAACCCC CATCTCCTGAAACG ATTACAGG CGTTTCGGGGGATG TGTTCGCACGTCCAT TERM 1948 1534092 - 1534059 - g 74 -11.1 -3.30124 | TTCTATGCTGGATAA CCCGGTAAAAACGCA GATC TCCGTTTTTACCTGG ACAGACGCCATCGAT TERM 1949 1534630 - 1534598 - g 70 -5.6 -4.43815 | gap 1, overlap 1534621 ACGAAGAGATGAAAA CCACCGG-CATCTTC AAGA AAAAATGCCCGGAGG AACACTATGTCGCCT TERM 1950 1534653 - 1534621 - g 93 -4.2 -5.45652 | gap 2, overlap 1534598 ATCTTCAAGAAAAAA TGCCCGG-AGG-AACA CTA TGTCGCCTTCCGTGCA TTCCGCGAAGATCCT TERM 1951 1535051 - 1535023 - g 74 -7.3 -4.08767 | CTGATCCCGGCAAAA GTTACGCCACGCA TTT TGCCGGGCGTTAC CGCCATCGGACAAGG CKO_01582 1532770 - 1535205 + | hypothetical protein TERM 1952 1535644 - 1535668 + G 77 -11.3 -3.54424 | ACCGATCTGCGTCGA GTCCTGCCCGC TGC GCGCGCTGGAC TTTGGCCCGATAGAA CKO_01583 1535216 - 1535833 + | hypothetical protein CKO_01584 1535835 - 1536692 + | hypothetical protein TERM 1953 1536699 - 1536718 + F 72 -9.2 -3.6003 | opp_overlap 1536697, overlap 1536700 GCAGGTTAACTTACG TGTGCGGG GAAA CCCGCACC TTTCAGGATGGTTTC TERM 1954 1536700 - 1536717 + F 78 -12.7 -2.75536 | opp_overlap 1536697, overlap 1536699 CAGGTTAACTTACGT GTGCGGG GAAA CCCGCAC CTTTCAGGATGGTTT TERM 1955 1536774 - 1536793 + G 70 -2.8 -4.77165 | gap 1, overlap 1536778 ATTTTTCTATGGCTG CACGCGTGC TGG GCGCGT-TG TTTTATTATGCGCCA TERM 1956 1536778 - 1536790 + G 75 -6.9 -4.49377 | overlap 1536774 TTCTATGGCTGCACG CGTGC TGG GCGCG TTGTTTTATTATGCG TERM 1957 1536893 - 1536908 + G 75 -6 -4.56597 | overlap 1536894 TCACCGGAGGTTCTG GCGCCG ATTG CGGCGG TTTTTCAGGCCGACA TERM 1958 1536894 - 1536907 + G 70 -9.5 -3.33744 | overlap 1536893 CACCGGAGGTTCTGG CGCCG ATTG CGGCG GTTTTTCAGGCCGAC CKO_01585 1536767 - 1537348 + | twin-argninine leader-binding protein DmsD TERM 1959 1537359 - 1537376 + F 95 -12.7 -3.96148 | GCTAACGCTTTTTCA GGCAGGG TACG CCCTGCC TTTATCGTCAAAAAC TERM 1960 1537415 - 1537427 + F 71 -7.7 -3.87583 | opp_overlap 1537415 TCCTCTTATCAATAA GTGAC AGC GTCAC TTTAACTTTCCGTTT CKO_01586 1537654 - 1538364 + | hypothetical protein TERM 1961 1538420 - 1538407 - g 87 -2.4 -5.59357 | ATGACATTAAAAAAA CATC TGCTGG GATG GCTTGCCGCCGCGTT CKO_01587 1538392 - 1539294 + | hypothetical protein CKO_01588 1539304 - 1539951 + | hypothetical protein CKO_01589 1539951 - 1541099 + | hypothetical protein CKO_01591 1541327 - 1541130 - | hypothetical protein TERM 1962 1541189 - 1541199 + gF 71 -6.8 -4.18018 | overlap 1541185 GGCAGTTCCCCCTGC GCAC GCA GTGC TTTTGCGTCCCGCGC TERM 1963 1541372 - 1541393 + Gr 89 -2.9 -5.47218 | GCCGGGTTTCGTCAC GCCATGCTG GTGC TGGAATGGC TTTTTTTACGTAACG TERM 1964 1542440 - 1542466 + Gr 81 -12.3 -3.2827 | opp_overlap 1542438 1542441, overlap 1542441 ATGATCTGTGAAATG ACCGGGGAGTA TCGAC TACTCCCCGGA TTACTGATTGCCTGC TERM 1965 1542441 - 1542465 + Gr 90 -15.8 -2.5664 | opp_overlap 1542438 1542441, overlap 1542440 TGATCTGTGAAATGA CCGGGGAGTA TCGAC TACTCCCCGG ATTACTGATTGCCTG TERM 1966 1542465 - 1542441 - gR 93 -15.8 -2.91144 | opp_overlap 1542441 1542440, overlap 1542438 TGATCTGTGAAATGA CCGGGGAGTA TCGAC TACTCCCCGG ATTACTGATTGCCTG CKO_01590 1541300 - 1542553 + | putative voltage-gated ClC-type chloride channel ClcB CKO_01592 1543279 - 1542509 - | putative dithiobiotin synthetase CKO_01593 1544550 - 1543330 - | hypothetical protein TERM 1967 1543928 - 1543908 - GR 95 -13.3 -3.66018 | TCACCACCTGAATAA CATCACGCG CGC CGCGCGATG CGCCAAAAAGCGCCT TERM 1968 1543938 - 1543961 + gr 71 -10.2 -2.67515 | opp_overlap 1543938, overlap 1543935 GCGATGCGCCAAAAA GCGCCTCGGC CATC GTCCAGGCGC TGATATCATGCTGAA TERM 1969 1543961 - 1543938 - GR 89 -8.8 -4.58395 | gap 1, opp_overlap 1543938 1543935 GCGATGCGCCAAAAA GCGCCTCGGCC ATC GTCC-AGGCGC TGATATCATGCTGAA CKO_01594 1544624 - 1544478 - | hypothetical protein TERM 1970 1544614 - 1544625 + gr 77 -4.4 -4.86621 | opp_overlap 1544614, overlap 1544603 TGAATGACTTCAATA GTTG TCGT CAAC TTTTTACTTAGCCGT CKO_01595 1545578 - 1544679 - | hypothetical protein CKO_01596 1545699 - 1546952 + | hypothetical protein TERM 1971 1546987 - 1546957 - T 100 -15.5 -3.86897 | opp_overlap 1546959 1546962, overlap 1546959 1546962 TGCACGTTTGATAAA GAGAATGCCCGGG TCGAG CCCGGGCATTCTT TACAGCTCAACCAGC TERM 1972 1546985 - 1546959 - T 100 -18.1 -3.5241 | opp_overlap 1546959 1546962, overlap 1546957 1546962 CACGTTTGATAAAGA GAATGCCCGGG TCGAG CCCGGGCATTC TTTACAGCTCAACCA TERM 1973 1546959 - 1546985 + T 100 -18.8 -3.57144 | opp_overlap 1546959 1546957 1546962, overlap 1546962 CACGTTTGATAAAGA GAATGCCCGGGT CGA GCCCGGGCATTC TTTACAGCTCAACCA TERM 1974 1546982 - 1546962 - T 100 -14 -3.89695 | opp_overlap 1546959 1546962, overlap 1546959 1546957 GTTTGATAAAGAGAA TGCCCGGG TCGAG CCCGGGCA TTCTTTACAGCTCAA TERM 1975 1546962 - 1546982 + T 100 -14.7 -3.92542 | opp_overlap 1546962 1546959 1546957, overlap 1546959 GTTTGATAAAGAGAA TGCCCGGGT CGA GCCCGGGCA TTCTTTACAGCTCAA CKO_01597 1547206 - 1546994 - | hypothetical protein CKO_01598 1547268 - 1547143 - | hypothetical protein CKO_01599 1547926 - 1547237 - | hypothetical protein TERM 1976 1547884 - 1547870 - GH 72 -3.5 -4.76423 | opp_overlap 1547870, overlap 1547865 CATAAACATAGAAAA GCAGC CTGAC ACTGC TTTTGTCCTGACAAT TERM 1977 1548543 - 1548531 - g 77 -7.7 -4.28254 | CGTGAAGAGGCAAAA CTTCG CGC CGAAG CTAAAGGATGTTCGC TERM 1978 1549437 - 1549457 + G 74 -9.7 -3.6682 | opp_overlap 1549430, overlap 1549440 CATAATCAGATTGCG CAAGGCGAT CTC AGCGCCTTG TTTGACTGGCTGCGA CKO_01600 1548051 - 1549592 + | hypothetical protein CKO_01603 1550037 - 1549765 - | hypothetical protein TERM 1979 1549982 - 1549966 - Gg 78 -2.2 -5.28755 | AAACACACCAAAAAA GCGGTA AAACA TACTGC GGCTAAACCGGCGGC CKO_01601 1549753 - 1550001 + | hypothetical protein TERM 1980 1550073 - 1550042 - gH 79 -11.6 -3.21276 | opp_overlap 1550044, overlap 1550006 1550040 1550044 CCCCGCGCCATAACA CACGGCGCTAAATC ATCG GGTTTAGCGCCGTT TCTTCGGAGGGTTAA TERM 1981 1550071 - 1550044 - gH 95 -14.2 -3.17146 | opp_overlap 1550044, overlap 1550006 1550042 1550040 CCGCGCCATAACACA CGGCGCTAAATC ATCG GGTTTAGCGCCG TTTCTTCGGAGGGTT TERM 1982 1550044 - 1550071 + GH 100 -16.4 -4.15788 | opp_overlap 1550006 1550044 1550042 1550040 CCGCGCCATAACACA CGGCGCTAAATC ATCG GGTTTAGCGCCG TTTCTTCGGAGGGTT CKO_01602 1550018 - 1550170 + | hypothetical protein CKO_01604 1550272 - 1551090 + | hypothetical protein CKO_01605 1551465 - 1551136 - | multidrug efflux system protein MdtI TERM 1983 1551234 - 1551219 - G 71 -4.6 -4.57073 | overlap 1551222 1551223 GACGCTGTCCAAAAA GCACCC ACCC GGCTGC CAGCGTGGCGGCGAT CKO_01606 1551814 - 1551452 - | multidrug efflux system protein MdtJ TERM 1984 1551642 - 1551613 - G 74 -2.2 -5.09762 | gap 1, overlap 1551615 1551616 1551632 GCGTAATAAATAAAA TACCG-ATGCCTT CCCAC AAGGCATACGCCA CGCCAAGCGCAATTT CKO_01607 1551954 - 1551793 - | hypothetical protein TERM 1985 1551941 - 1551931 - GR 72 -8.2 -3.80516 | overlap 1551932 AAGTAAGGGACTAAA GCGC GTT GCGC CAGTGCTGCTCACCA CKO_01608 1552099 - 1551926 - | hypothetical protein TERM 1986 1553107 - 1553118 + G 84 -5.8 -4.99035 | overlap 1553088 GTGGATTGGGCCTTT CCAC GCTG GTGG TTTTTCTCTCCCTGA CKO_01609 1552170 - 1553270 + | putative transport protein TERM 1987 1553284 - 1553311 + T 78 -12.8 -2.52676 | opp_overlap 1553289, overlap 1553289 GATCTCTTCAGATGC AAAAACGGCCTC CTGA GAGGCCGTTTTA TGACTTGCGCCAGTA TERM 1988 1553289 - 1553306 + T 100 -12.7 -4.4715 | opp_overlap 1553289, overlap 1553284 CTTCAGATGCAAAAA CGGCCTC CTGA GAGGCCG TTTTATGACTTGCGC TERM 1989 1553306 - 1553289 - T 100 -12.7 -4.70659 | opp_overlap 1553284 1553289 CTTCAGATGCAAAAA CGGCCTC CTGA GAGGCCG TTTTATGACTTGCGC CKO_01610 1554719 - 1553331 - | pyridine nucleotide transhydrogenase CKO_01611 1556274 - 1554730 - | NAD(P) transhydrogenase subunit alpha CKO_01612 1556552 - 1556406 - | hypothetical protein CKO_01613 1556785 - 1557729 + | hypothetical protein TERM 1990 1557778 - 1557734 - f 75 -11.4 -3.04864 | opp_overlap 1557731 1557730 1557740, overlap 1557731 1557761 TGTATAAGTAAAGTA CGCTCCCGCCATCCGGTGTT GTCAT AACGCCTGATGGCGAGACCA GGCATCTTATCCGGC TERM 1991 1558929 - 1558942 + G 71 -8.1 -3.89346 | GCTGGACCATTATGG CGGCA GAAG TGCCG TTTCTGGCCTCAACG CKO_01614 1558019 - 1559401 + | hypothetical protein CKO_01616 1559524 - 1559357 - | hypothetical protein TERM 1992 1559571 - 1559610 + Gr 83 -7.9 -4.57569 | gap 2, overlap 1559572 ACTATCCAGCCATCG ACGGCCTG-ACGCA-AGCG GGCG CGCTGTGCATTCAGGCCGA TTTTTCCACCGATGA TERM 1993 1559572 - 1559609 + Gr 79 -11.4 -3.3422 | gap 2, overlap 1559571 CTATCCAGCCATCGA CGGCCTG-ACGCA-AGCG GGCG CGCTGTGCATTCAGGCCG ATTTTTCCACCGATG TERM 1994 1559723 - 1559692 - gR 73 -9.5 -3.30124 | gap 2, opp_overlap 1559709, overlap 1559693 GGCTATTTTGCATAA CGCCAG-CGCCT-GG ATGG CCGAGGCGCCTGGCA CCCCGCTCTCTGACG TERM 1995 1559722 - 1559693 - gR 70 -10.8 -2.57931 | gap 2, opp_overlap 1559709, overlap 1559692 GCTATTTTGCATAAC GCCAG-CGCCT-GG ATGG CCGAGGCGCCTGGC ACCCCGCTCTCTGAC TERM 1996 1560095 - 1560073 - gR 72 -9.2 -3.51934 | opp_overlap 1560073, overlap 1560071 GCCCGGCGAGAAAGA GGTAATCGAC CTG GTGGATTACC TTCTCACCAGCTGCT CKO_01615 1559420 - 1560160 + | short chain dehydrogenase CKO_01617 1560492 - 1560157 - | hypothetical protein TERM 1997 1560459 - 1560474 + g 70 -5.4 -4.37886 | gap 1, overlap 1560459 1560460 TCAATACCACCACCA G-CGCAC CCA GTGCGGC TTTTATCACGAGTCC CKO_01618 1560611 - 1561354 + | DNA-binding transcriptional regulator RstA CKO_01619 1561367 - 1562668 + | sensor protein RstB TERM 1998 1563394 - 1563343 - g 75 -6.5 -4.43859 | gap 2 CACAACTGGAGAAAA GCCTGAACACGCCGCGCAGCGTGCA TCCC TGGACGC-GCGAAGAGTGG-CAGGC CAGGCTGGAGCGCGA CKO_01620 1562766 - 1563695 + | DNA replication terminus site-binding protein CKO_01621 1565140 - 1563692 - | fumarate hydratase TERM 1999 1563772 - 1563814 + g 74 -2 -5.04385 | opp_overlap 1563767, overlap 1563769 CAGTGAGATACCCCA GCGC-CAGGGCGGAGGCT TTTAAGGTC AGCC-CTTCCTTGTGCGC TTTTTTGGCGATCTC CKO_01623 1566901 - 1565255 - | hypothetical protein TERM 2000 1566517 - 1566500 - GH 72 -10.5 -2.93447 | overlap 1566499 GTAAGTGTTATAAAC GCCGCGC GCCA GCGCAGC CTCATCACCGCCGCC TERM 2001 1566534 - 1566550 + gH 77 -3.6 -5.00884 | overlap 1566530 TCATCACCGCCGCCA GTCCAG ACGCG CTGGCC TTTTTTACCAACGAT CKO_01622 1566818 - 1567069 + | hypothetical protein TERM 2002 1568286 - 1568310 + G 71 -9.9 -3.54935 | GCGCTGATGAGTCTC CGGTTAACGCC AGC GGCGTGGGCCG TTTGGCCAGGGTTTA CKO_01624 1567163 - 1568338 + | hypothetical protein TERM 2003 1568396 - 1568417 + F 100 -13 -4.38116 | AGGCTCACAACTTCT CCAGGCGG TTTAAT CCGCCTGG TTTCATTTTTATGGA CKO_01625 1568441 - 1569949 + | hypothetical protein TERM 2004 1569961 - 1569979 + T 93 -11.7 -3.66178 | overlap 1569966 GTAAGTTTCCTGTAC GTCCCGC GCCCG GCGGGAC TTTCCCGTTGGGCCG TERM 2005 1569966 - 1569995 + T 88 -14.3 -3.02263 | gap 1, overlap 1569961 TTTCCTGTACGTCCC GC-GCCCGGCGGGA CTT TCCCGTTGGGCCGC TATTCAAACACCTGT CKO_01626 1571048 - 1570020 - | DNA-binding transcriptional repressor MalI CKO_01627 1571134 - 1571283 + | hypothetical protein TERM 2006 1571810 - 1571834 + GF 78 -6.3 -4.62069 | overlap 1571812 ATGGGACTGGTCGGG CTGGTCATTCC GCT GGTATGGCCTG TTTTTGCAATGGGCA TERM 2007 1571812 - 1571832 + GF 71 -7.5 -3.92746 | overlap 1571810 GGGACTGGTCGGGCT GGTCATTCC GCT GGTATGGCC TGTTTTTGCAATGGG CKO_01628 1571225 - 1572817 + | bifunctional maltose and glucose-specific PTS system components IICB TERM 2008 1573098 - 1573078 - g 72 -11.9 -2.66316 | opp_overlap 1573081, overlap 1573075 CCCGTCACCACACTA CGATCGACC CAC AGTCGATCG TGTACGGCCCCTCCG CKO_01629 1572828 - 1574000 + | hypothetical protein TERM 2009 1574000 - 1574040 + F 73 -7.8 -4.10855 | gap 1, opp_overlap 1574004 1574007, overlap 1574001 1574004 CCGCGCTATACGCTG ACAATGATTGCGCAATAAA ATTA TTTATTGCGCAA-CATAGA TTTTACGCCCGTTTT TERM 2010 1574001 - 1574039 + F 75 -11.3 -3.0579 | gap 1, opp_overlap 1574004 1574007, overlap 1574000 1574004 CGCGCTATACGCTGA CAATGATTGCGCAATAAA ATTA TTTATTGCGCAA-CATAG ATTTTACGCCCGTTT TERM 2011 1574036 - 1574004 - f 82 -11.6 -3.32343 | gap 1, opp_overlap 1574001 1574000 1574004, overlap 1574007 GCTATACGCTGACAA TGATTGCGCAATAAA ATTA TTTATTGCGCAA-CA TAGATTTTACGCCCG TERM 2012 1574004 - 1574036 + F 76 -11.6 -2.74605 | gap 1, opp_overlap 1574004 1574007, overlap 1574001 1574000 GCTATACGCTGACAA TGATTGCGCAATAAA ATTA TTTATTGCGCAA-CA TAGATTTTACGCCCG TERM 2013 1574034 - 1574007 - f 87 -14.4 -2.83449 | opp_overlap 1574004 1574001 1574000, overlap 1574004 ATACGCTGACAATGA TTGCGCAATAAA ATTA TTTATTGCGCAA CATAGATTTTACGCC TERM 2014 1574261 - 1574273 + G 77 -7.7 -4.37092 | TCACCTCAACGGAGC CTGAC CTG GTCAG TTTTCTGGCAAAGCT TERM 2015 1575082 - 1575070 - g 74 -4.7 -4.71482 | opp_overlap 1575044, overlap 1575044 AGCAAAGCGGAAAAA CGCGC ATT GCGTG AGAAAGTCGCAGCGG CKO_01630 1574065 - 1575102 + | adenosine deaminase TERM 2016 1575127 - 1575106 - T 83 -13.7 -2.71364 | opp_overlap 1575105 1575106 1575126, overlap 1575111 GCAGCGGTTTAAGCA CGCAACGCC TGAT GGCGCTGCG CTTATCAGGCCGACA TERM 2017 1575106 - 1575127 + T 73 -11.5 -2.57132 | opp_overlap 1575106 1575111, overlap 1575105 1575126 GCAGCGGTTTAAGCA CGCAACGCC TGAT GGCGCTGCG CTTATCAGGCCGACA CKO_01631 1576360 - 1575305 - | putative oxidoreductase TERM 2018 1575461 - 1575444 - G 73 -9.1 -3.79113 | ATGCCCGCATAATAA GCCGGAT AATT ACCCGGC ACCGTCAGCCACGTC CKO_01632 1576432 - 1576716 + | hypothetical protein CKO_01633 1576759 - 1576899 + | hypothetical protein CKO_01634 1576821 - 1576913 + | hypothetical protein CKO_01635 1576903 - 1577007 + | hypothetical protein CKO_01636 1576932 - 1577072 + | hypothetical protein CKO_01637 1577137 - 1577238 + | hypothetical protein CKO_01638 1577328 - 1577768 + | hypothetical protein CKO_01639 1577845 - 1578426 + | Na(+)-translocating NADH-quinone reductase subunit E CKO_01640 1578426 - 1579004 + | electron transport complex protein RnfB TERM 2019 1579847 - 1579821 - g 74 -7.3 -4.18018 | gap 1, overlap 1579846 CGTGCTGATGCAAAA CGTTGGTACGGC TTAT GCCGT-CAAACG CGCAGTGATTGACGG TERM 2020 1580447 - 1580436 - g 72 -2.2 -4.84359 | overlap 1580438 TGAGCGCCATAAAAA TGCG GCCG CACA ACCTGCGGCAAAAGA TERM 2021 1581056 - 1581040 - g 77 -11.5 -3.55071 | GTAGACCCGCGCAAA GCCGCCG TCG CAGCGGC GATCGCCCGCGTTCA TERM 2022 1581094 - 1581082 - g 93 -4.7 -5.47218 | GTTCAGGCAAAAAAA GCAGC ACA GCAGC AGGTTGTTAACGAGG CKO_01641 1578997 - 1581114 + | electron transport complex protein RnfC TERM 2023 1581836 - 1581855 + G 70 -2.8 -4.72986 | overlap 1581848 GGCAAAAAGCGATCC GCTGGC ACATTCCG GTCAGC TTTTTAGTGACGCTG CKO_01642 1581115 - 1582167 + | electron transport complex protein RnfD CKO_01643 1582177 - 1582797 + | electron transport complex protein RnfG TERM 2024 1583191 - 1583167 - g 80 -4.8 -5.00616 | opp_overlap 1583167 1583168 1583176, overlap 1583168 TTTGCCGCGAAAAAA GGCCCGGCGC TGTCC GCGCTGGACG GTTTTTCCATTGGCA TERM 2025 1583176 - 1583192 + G 81 -6.5 -4.74504 | opp_overlap 1583168 1583167, overlap 1583168 1583167 AAAAAAGGCCCGGCG CTGTCCG CGC TGGACGG TTTTTCCATTGGCAT TERM 2026 1583361 - 1583375 + G 72 -3.5 -4.75472 | gap 1, overlap 1583363 TTTCCTGCTGGCGAT GCTGCC GCCC GGC-GC TTTTATTGGTCTGGG CKO_01644 1582801 - 1583493 + | SoxR-reducing system protein RsxE CKO_01645 1583493 - 1584128 + | endonuclease III TERM 2027 1584792 - 1584765 - g 71 -8.6 -3.78475 | gap 1, opp_overlap 1584765 1584771 1584781, overlap 1584761 1584766 1584771 1584772 CAAACAATAAACCAA CTGAAAGCG-TCA GTT TGAACGCTTTCAA ACAACCGAAATCGTT CKO_01646 1584563 - 1586245 + | putative tripeptide transporter permease TERM 2028 1586269 - 1586290 + F 100 -14.5 -6.11644 | GAAACTGATATTCAG GCCGCTAAC GTGC GTTAGCGGC TTTTTTTTTGCCTGA CKO_01647 1586305 - 1586955 + | glutathionine S-transferase TERM 2029 1587027 - 1587040 + T 75 -9.5 -3.55444 | opp_overlap 1587005 1587024, overlap 1587036 1587039 GCCCGGTAAGCATTA GCGCC TCCG GGCGC TTTGCCGGATGACGG TERM 2030 1587205 - 1587158 - T 74 -6.9 -4.37092 | overlap 1587160 1587161 ATCCGGCCTATAAAA CAGCCCGTAG-GCCCGGTAAGCG TTAG CGCCT-CCGGGCGCTTCGGGAAA ACTCACAGCTGCGTC TERM 2031 1587203 - 1587160 - T 93 -11.7 -3.79419 | overlap 1587158 1587161 CCGGCCTATAAAACA GCCCGTAG-GCCCGGTAAGCG TTAG CGCCT-CCGGGCGCTTCGGGA AAACTCACAGCTGCG TERM 2032 1587202 - 1587161 - T 93 -15.2 -2.8733 | overlap 1587160 1587158 CGGCCTATAAAACAG CCCGTAG-GCCCGGTAAGCG TTAG CGCCT-CCGGGCGCTTCGGG AAAACTCACAGCTGC CKO_01648 1588077 - 1587208 - | pyridoxamine kinase TERM 2033 1587756 - 1587768 + g 71 -4.8 -4.54727 | AGAAATATTTCGCCT GTGG ATTCG CCAC TTTTACTTTACGAAC TERM 2034 1588092 - 1588119 + r 75 -11.2 -2.95224 | opp_overlap 1588095, overlap 1588090 1588083 TAACCCTAAAATAAT AAAGGGGCGTGG TTTC CCACGCCCCTGC TGACTTTTTATTATT TERM 2035 1588116 - 1588095 - R 100 -17.3 -4.67697 | opp_overlap 1588092 1588090 1588083 CCCTAAAATAATAAA GGGGCGTGG TTTC CCACGCCCC TGCTGACTTTTTATT CKO_01649 1589416 - 1588130 - | tyrosyl-tRNA synthetase TERM 2036 1589508 - 1589484 - R 86 -9.2 -4.42974 | GGTATATAGAATAAA GCGCTGACGC ACGCA GCGCTAGCGC TTAACACAACAAATT CKO_01650 1590187 - 1589531 - | pyridoxamine 5'-phosphate oxidase TERM 2037 1589934 - 1589956 + g 78 -6.2 -4.78107 | overlap 1589935 GCCTTACGGCTGCCC AGGTTGGTGT AAA ACACCATCCC TTTTTCATCGTAATG TERM 2038 1589935 - 1589955 + g 70 -9.7 -3.46141 | overlap 1589934 CCTTACGGCTGCCCA GGTTGGTGT AAA ACACCATCC CTTTTTCATCGTAAT CKO_01651 1590575 - 1590246 - | lysozyme inhibitor CKO_01652 1591855 - 1590662 - | anhydro-N-acetylmuramic acid kinase TERM 2039 1591855 - 1591868 + g 73 -5.3 -4.67234 | opp_overlap 1591855 TTTCCGCTAATACCA TGCTT CATT AAGCA TTTTTACCCTTCGAT CKO_01653 1592067 - 1592534 + | hypothetical protein TERM 2040 1592572 - 1592540 - T 81 -12.7 -3.17075 | opp_overlap 1592542 1592544, overlap 1592542 TCCGCGCTAATCCAA CAGACGTGTGGTCAG CCT CTGGCCACACGCCTT TCTTCTGCTCTTAGT TERM 2041 1592542 - 1592570 + T 100 -15.3 -4.39277 | opp_overlap 1592542 1592540, overlap 1592544 CGCGCTAATCCAACA GACGTGTGGTCAG CCT CTGGCCACACGCC TTTCTTCTGCTCTTA TERM 2042 1592570 - 1592542 - T 100 -15.3 -3.14878 | opp_overlap 1592542 1592544, overlap 1592540 CGCGCTAATCCAACA GACGTGTGGTCAG CCT CTGGCCACACGCC TTTCTTCTGCTCTTA TERM 2043 1592544 - 1592568 + T 95 -16.5 -2.52404 | opp_overlap 1592542 1592540, overlap 1592542 CGCTAATCCAACAGA CGTGTGGTCAG CCT CTGGCCACACG CCTTTCTTCTGCTCT CKO_01654 1593023 - 1592583 - | transcriptional regulator SlyA CKO_01655 1593218 - 1593454 + | hypothetical protein CKO_01656 1593448 - 1594317 + | hypothetical protein TERM 2044 1595885 - 1595905 + G 70 -5.3 -4.42653 | overlap 1595887 CAAAAGCCGTCGCCA TATCCGCGC ATT GCGCAGAGA TTTTGTCGATCAGCT CKO_01657 1594317 - 1596332 + | hypothetical protein CKO_01658 1596854 - 1596333 - | superoxide dismutase CKO_01659 1597830 - 1596934 - | hypothetical protein CKO_01660 1598119 - 1597880 - | hypothetical protein CKO_01661 1598221 - 1598820 + | hypothetical protein TERM 2045 1598807 - 1598826 + F 86 -4.2 -5.54338 | AAACGATTATCGCAA CGCCTG CGGCTTAA CGGGCG TTTTTATTTTCCTTA CKO_01662 1598879 - 1599976 + | N-ethylmaleimide reductase TERM 2046 1599990 - 1600007 + F 79 -12.7 -2.78384 | AATCCTGCGTTGGTA GCGGCGT AAAA ACGCCGC TATACTAGAACAACA CKO_01663 1600083 - 1600472 + | glyoxalase I TERM 2047 1600478 - 1600506 + F 100 -15.3 -4.29738 | overlap 1600481 GGGCAACTAATCTCC CGCCGGGCACAGA CTC TCTGTGCCCGTTG TTTTACTGCATCTCA TERM 2048 1600481 - 1600503 + F 100 -17.8 -4.26327 | overlap 1600478 CAACTAATCTCCCGC CGGGCACAGA CTC TCTGTGCCCG TTGTTTTACTGCATC TERM 2049 1600598 - 1600612 + G 75 -7.1 -4.45077 | TAACGCTCAACTTTC CGGTC TGTGC GACCG TTTTCGTGGTTTTTA CKO_01664 1600575 - 1601222 + | ribonuclease T TERM 2050 1601292 - 1601321 + T 88 -12.3 -3.6215 | opp_overlap 1601299, overlap 1601299 CCGCGTTTTCAGCAA AAAAAAAGCGACC AGAT GGTCGCTTTTTTA TTTCGGCTGAATTAC TERM 2051 1601299 - 1601314 + T 100 -10.4 -5.64421 | opp_overlap 1601299, overlap 1601292 TTCAGCAAAAAAAAA GCGACC AGAT GGTCGC TTTTTTATTTCGGCT TERM 2052 1601314 - 1601299 - T 100 -10.4 -6.15828 | opp_overlap 1601299 1601292 TTCAGCAAAAAAAAA GCGACC AGAT GGTCGC TTTTTTATTTCGGCT CKO_01665 1601680 - 1601333 - | hypothetical protein TERM 2053 1601639 - 1601658 + g 84 -5.7 -5.1101 | overlap 1601641 CAGGAGAATCGGGTT TTCAGCG ATCTGG CGCTGGA TTTTTTCGATAGTGG CKO_01666 1601802 - 1601677 - | hypothetical protein TERM 2054 1602477 - 1602511 + G 83 -8.4 -4.4078 | opp_overlap 1602477 AATCAGATTGGCAAA CCGTATCGTTGGGGCG GAA CGTCTCCACGAACCGG TTTTGATTGCAGCGG CKO_01667 1602087 - 1602830 + | hypothetical protein TERM 2055 1602826 - 1602868 + F 80 -7.3 -4.55721 | gap 2, opp_overlap 1602833 1602834 1602835, overlap 1602830 1602834 1602835 CGCCGAAAACCATTC GATAAAACGTTACCCTGTAGT ATG GCTACAGGGTAA-GTTCT-TC TTTTGTATCACCTTT TERM 2056 1602830 - 1602865 + F 86 -9.2 -4.38141 | gap 1, opp_overlap 1602833 1602834 1602835, overlap 1602826 1602834 1602835 GAAAACCATTCGATA AAACGTTACCCTGTAGT ATG GCTACAGGGTAA-GTTC TTCTTTTGTATCACC TERM 2057 1602862 - 1602833 - f 93 -10.2 -4.41206 | gap 1, opp_overlap 1602830 1602826 1602834 1602835, overlap 1602834 1602835 AACCATTCGATAAAA CGTTACCCTGTAG TATGG CTACAGGGTAA-G TTCTTCTTTTGTATC TERM 2058 1602834 - 1602862 + F 91 -11.1 -4.29348 | opp_overlap 1602833 1602834 1602835, overlap 1602830 1602826 1602835 ACCATTCGATAAAAC GTTACCCTGTAGT ATG GCTACAGGGTAAG TTCTTCTTTTGTATC TERM 2059 1602862 - 1602834 - f 74 -10.4 -3.24 | opp_overlap 1602834 1602830 1602826 1602835, overlap 1602833 1602835 ACCATTCGATAAAAC GTTACCCTGTAG TATGG CTACAGGGTAAG TTCTTCTTTTGTATC TERM 2060 1602861 - 1602835 - f 83 -13.9 -2.53918 | opp_overlap 1602834 1602830 1602826 1602835, overlap 1602833 1602834 CCATTCGATAAAACG TTACCCTGTAG TATGG CTACAGGGTAA GTTCTTCTTTTGTAT TERM 2061 1602835 - 1602861 + F 90 -14.6 -3.15982 | opp_overlap 1602835 1602833 1602834, overlap 1602834 1602830 1602826 CCATTCGATAAAACG TTACCCTGTAGT ATG GCTACAGGGTAA GTTCTTCTTTTGTAT CKO_01668 1602956 - 1603537 + | superoxide dismutase TERM 2062 1603569 - 1603547 - T 100 -17.8 -4.06866 | opp_overlap 1603547 GCATAAAGAGAATAA CGCAGAAGGG AGT CCCTTCTGCG TTTTAATGCTGCGCT TERM 2063 1603547 - 1603569 + T 100 -17.8 -4.30844 | opp_overlap 1603547 GCATAAAGAGAATAA CGCAGAAGGG AGT CCCTTCTGCG TTTTAATGCTGCGCT CKO_01669 1604750 - 1603584 - | hypothetical protein TERM 2064 1604551 - 1604534 - G 75 -4.1 -4.8487 | CCATCAAAAAAATAA GCGCA TTACGACG TGCGC GATGGGAAAGCAGCA TERM 2065 1604917 - 1604894 - R 82 -11 -3.54691 | overlap 1604892 1604896 AAGAGAGAGGAAAGA CAGAGGGAGA ATGC TCTCCCTCAG AGGTAAATCAGTTCA TERM 2066 1604915 - 1604896 - R 85 -12.2 -3.33473 | overlap 1604894 1604892 GAGAGAGGAAAGACA GAGGGAGA ATGC TCTCCCTC AGAGGTAAATCAGTT CKO_01670 1605153 - 1604914 - | hypothetical protein CKO_01671 1605160 - 1605312 + | hypothetical protein CKO_01672 1605312 - 1606337 + | DNA-binding transcriptional repressor PurR CKO_01674 1607266 - 1606334 - | putative DNA-binding transcriptional regulator CKO_01673 1607248 - 1607403 + | hypothetical protein TERM 2067 1607971 - 1607958 - gf 74 -4.5 -4.76041 | overlap 1607947 CACAGCCAGGAAAAA CTGAC CTTC GCCAG CCTGCTGCGTTCACA TERM 2068 1608049 - 1608059 + GF 74 -8.2 -3.96148 | TTTTTGCCTGGCTGA CGGG TTC CCCG TTTATCCTCAGCGAA CKO_01675 1607349 - 1608584 + | inner membrane transport protein YdhC TERM 2069 1608697 - 1608716 + F 72 -9.3 -3.53444 | ATTATTATGCGTTAA CGGGAAC CGGAGC GTTCCCG TTTCACCACGGATGG TERM 2070 1608781 - 1608803 + F 74 -8.4 -3.85698 | opp_overlap 1608780 1608782, overlap 1608782 TACGTCGGATAATAG ACTCGCGGAA TTA TTCCGTGAGA TTTCTCACAAAGCCC TERM 2071 1608782 - 1608802 + F 77 -11.9 -2.91276 | opp_overlap 1608780 1608782, overlap 1608781 ACGTCGGATAATAGA CTCGCGGAA TTA TTCCGTGAG ATTTCTCACAAAGCC TERM 2072 1608802 - 1608782 - f 71 -9.7 -3.17325 | opp_overlap 1608782 1608781, overlap 1608780 ACGTCGGATAATAGA CTCGCGGAA TTA TTCCGTGAG ATTTCTCACAAAGCC TERM 2073 1609405 - 1609423 + G 73 -8.8 -3.89524 | overlap 1609404 GGATATCGGATGTGG CTGGGGCG GCT TGTCCCAG TTTATGGCGTCCAAT CKO_01676 1608875 - 1610023 + | cyclopropane fatty acyl phospholipid synthase TERM 2074 1610033 - 1610049 + T 100 -15.1 -4.67011 | opp_overlap 1610033 CGCTAATCCTGATAA CCCCCGC GCT GCGGGGG TTTTTACGTCGGGTT TERM 2075 1610049 - 1610033 - T 100 -15.1 -3.33261 | opp_overlap 1610033 CGCTAATCCTGATAA CCCCCGC GCT GCGGGGG TTTTTACGTCGGGTT CKO_01677 1610704 - 1610063 - | riboflavin synthase subunit alpha TERM 2076 1610138 - 1610179 + gT 85 -2.2 -5.4505 | opp_overlap 1610134 GGTGTCAACAACCGC CTGGGTTTGCGGATCAAT TTCGAT ATTGACGCGAGCACCCAG TTTTTTCTTACCCAG CKO_01678 1610804 - 1610658 - | hypothetical protein TERM 2077 1610863 - 1610880 + H 85 -6.2 -5.24989 | CTGCATTTTCTTCTT GCTGCC ATTTAA GGCGGC TTTTTTAGTCTCTCA TERM 2078 1611304 - 1611347 + G 85 -11 -3.96618 | gap 1, overlap 1611298 1611287 1611307 TGGCGGATAAAGCCG TGGGCTATCTTCGCGCGCTCC TGT GGGGCGCGCCGGGATA-CCTG TTCTTTCAGGTTGCG TERM 2079 1611307 - 1611345 + G 89 -13.8 -3.57017 | overlap 1611298 1611287 1611304 CGGATAAAGCCGTGG GCTATCTTCGCGCGCTCC TGT GGGGCGCGCCGGGATACC TGTTCTTTCAGGTTG CKO_01679 1610922 - 1612295 + | multidrug efflux protein TERM 2080 1612304 - 1612323 + F 93 -13.6 -3.51563 | opp_overlap 1612297 1612304, overlap 1612286 GCGATAAATCAGCAA TAGCCGCC GAAC GGCGGCTA TTCTCTCGACATTTT TERM 2081 1612323 - 1612304 - f 90 -13.6 -3.35467 | opp_overlap 1612304 1612286, overlap 1612297 GCGATAAATCAGCAA TAGCCGCC GAAC GGCGGCTA TTCTCTCGACATTTT TERM 2082 1613993 - 1613981 - g 76 -3.3 -5.03314 | TGCAGTTTGAAAAAA CGCGT AAT ACCCG CCTCAATGAAGGCCT CKO_01682 1612903 - 1615203 + | outer membrane receptor FepA TERM 2083 1615239 - 1615257 + T 82 -13.1 -3.09878 | opp_overlap 1615226 TAGCGTAATGGCTAA GGGCGGC TTCCC GCCGCCC TCTTCACTCACTGCC CKO_01683 1616178 - 1615276 - | hypothetical protein CKO_01684 1616458 - 1617360 + | hypothetical protein CKO_01687 1617629 - 1617453 - | hypothetical protein CKO_01685 1617496 - 1617636 + | hypothetical protein TERM 2084 1617645 - 1617659 + GTFrH 100 -9.2 -6.09888 | opp_overlap 1617645 AATATAACGACAGAA CCGGCG TAA TGCCGG TTTTTTTTATTCAGG CKO_01686 1617503 - 1617679 + | hypothetical protein CKO_01689 1618006 - 1617734 - | hypothetical protein TERM 2085 1617865 - 1617814 - GfH 79 -9.5 -3.7732 | TGGCGACAGGAAGAA CAGACTCAACAATACGCTGAAGA TGAGGC TCCGCATCGTACTGTCGGGTCTG TGGACGTGCCTTCAC CKO_01688 1617942 - 1618172 + | hypothetical protein CKO_01690 1618218 - 1619051 + | hypothetical protein TERM 2086 1619077 - 1619096 + G 100 -13.6 -4.17089 | overlap 1619091 GGTTTGTTTACCCGC TCCGCAGC TTCG GCTGCGGA TTTTACGCATTTGCG CKO_01691 1619053 - 1619871 + | hypothetical protein CKO_01692 1619871 - 1620650 + | hypothetical protein TERM 2087 1621106 - 1621123 + G 83 -6.3 -4.84359 | gap 1, opp_overlap 1621106 TGCTACGCAATGTAA TGCC-GTC ATT GACCGGCA TTTTTATCGGCCTGC TERM 2088 1621228 - 1621209 - g 70 -9.3 -3.65046 | CGGTCAGGTGAATAA CCGGGTA CAGATT TACCCGG CGGCCATTTTTATCT CKO_01693 1620640 - 1621317 + | hypothetical protein CKO_01694 1622135 - 1621323 - | hypothetical protein CKO_01695 1622924 - 1622139 - | hypothetical protein CKO_01696 1623652 - 1622921 - | hypothetical protein TERM 2089 1623087 - 1623061 - G 72 -3.7 -4.77036 | overlap 1623065 CTTCACGACCAAAAA TCAATGCGTGC TCCGG GCAGGCATTCA CGCAAATCGGCGGGA CKO_01697 1624297 - 1623653 - | hypothetical protein TERM 2090 1623914 - 1623900 - G 75 -7.1 -4.4078 | overlap 1623904 GTCTGGCAATCAAAA CGCAC CGCCT GTGCG ATAGCCCGGCAAATA CKO_01698 1626434 - 1624308 - | putative oxidoreductase TERM 2091 1625009 - 1625028 + g 72 -2.1 -4.91109 | GGTGTACCGGATAGC CAAACGG CGACCA CAGTTTG TTTTTATCGTACGCC TERM 2092 1625484 - 1625500 + g 80 -8.7 -4.1413 | opp_overlap 1625487 GCAGCGGATCGGACA TGAGTGG CAA CCGCTCA TTTTCACGGTGTATT TERM 2093 1625582 - 1625599 + g 74 -10.5 -3.53012 | CCGTATTTTGATTAC CCGGCGG GATC TCGCCGG TTTCAACAGGCCCGC TERM 2094 1625801 - 1625823 + g 87 -8.5 -4.57073 | gap 1 TGACCCCTTTGGTGC CCTCAACGGC AATG GCC-TTGAGG TTTTTCGCCCCCATC CKO_01699 1627057 - 1626431 - | hypothetical protein TERM 2095 1627456 - 1627432 - RH 72 -9.3 -3.65603 | AAATACCGGGAATAA GGGATGACG AAGCGAG CGCCATCCC TGAGAGAATTATCCT CKO_01701 1627674 - 1627465 - | hypothetical protein CKO_01700 1627481 - 1627744 + | hypothetical protein CKO_01702 1628690 - 1627878 - | hypothetical protein CKO_01703 1629380 - 1628712 - | hypothetical protein CKO_01704 1630395 - 1629373 - | hypothetical protein TERM 2096 1630097 - 1630085 - G 77 -4.8 -4.9725 | ATTTGCATAGAAAAA GCGA TGTTT TCGC TGACGGTACGCGACC TERM 2097 1630213 - 1630194 - G 72 -12.2 -2.60496 | overlap 1630193 1630191 TCGCCGCTGAAATAT CGTGACCA TTGA TGGTCACG CTGCCCACGGTCGGT CKO_01705 1630706 - 1630497 - | hypothetical protein TERM 2098 1631220 - 1631241 + G 90 -8.6 -4.70583 | overlap 1631215 TTACGCACGCCGTCT GGCGCAGG AGACGC CCGGCGCC TTTTATATTGATCAG TERM 2099 1631880 - 1631905 + G 75 -12.5 -2.62667 | overlap 1631879 1631877 CGATACGCTGGCGAC CGTGCTGGCGC GTAT GCGCCTGTACG ATATTTCGCAGTTGC CKO_01706 1630819 - 1632189 + | hypothetical protein TERM 2100 1632889 - 1632876 - g 83 -9.5 -4.11216 | GGGTTATCTGCAAAA CGCCG TCGG CGGCG TACTGGACCCATTTA CKO_01707 1632199 - 1633344 + | hypothetical protein CKO_01708 1633536 - 1633321 - | hypothetical protein CKO_01709 1633721 - 1635133 + | pyruvate kinase TERM 2101 1635182 - 1635168 - f 91 -8.5 -5.06414 | opp_overlap 1635168 TTTTCTGAATAAAAA GCGCC CTCGC GGCGC TTTTTTTATTTAATC TERM 2102 1635168 - 1635182 + F 100 -8.5 -5.99154 | opp_overlap 1635168 TTTTCTGAATAAAAA GCGCC CTCGC GGCGC TTTTTTTATTTAATC CKO_01710 1635445 - 1635681 + | hypothetical protein TERM 2103 1635691 - 1635731 + T 93 -14.9 -3.45395 | opp_overlap 1635702, overlap 1635692 1635702 AAGTAATAGTACCTG TGTAATAAAAATGGCGCAC ATT GTGCGCCATTTTTTTTGCC TGTGTTTTCCCTTCT TERM 2104 1635692 - 1635730 + T 100 -18.4 -2.66152 | opp_overlap 1635702, overlap 1635691 1635702 AGTAATAGTACCTGT GTAATAAAAATGGCGCAC ATT GTGCGCCATTTTTTTTGC CTGTGTTTTCCCTTC TERM 2105 1635720 - 1635702 - T 100 -14.6 -5.06414 | opp_overlap 1635692 1635691 1635702 CCTGTGTAATAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTTGCCTGTG TERM 2106 1635702 - 1635720 + T 100 -14.6 -5.83822 | opp_overlap 1635702, overlap 1635692 1635691 CCTGTGTAATAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTTGCCTGTG CKO_01711 1636754 - 1635750 - | hypothetical protein CKO_01712 1637272 - 1636856 - | cysteine desufuration protein SufE TERM 2107 1636934 - 1636947 + g 74 -2.3 -5.00616 | GGAGGGCGTGAGATG TTGCG TCAG CGCCA TTTTTTCAAACCACG CKO_01713 1638505 - 1637285 - | selenocysteine lyase TERM 2108 1637464 - 1637480 + g 70 -10.1 -3.35522 | overlap 1637463 TGTCGAGGAAGCTGC CCACGTC ATA GGCGTGG TGTTTGCCCAGATTA CKO_01714 1639773 - 1638502 - | cysteine desulfurase activator complex subunit SufD CKO_01715 1640494 - 1639748 - | cysteine desulfurase ATPase component CKO_01716 1641998 - 1640511 - | cysteine desulfurase activator complex subunit SufB CKO_01717 1642375 - 1642007 - | iron-sulfur cluster assembly scaffold protein TERM 2109 1642803 - 1642760 - R 100 -20.6 -3.41581 | opp_overlap 1642767, overlap 1642763 1642788 GAACGGAGTAATTAA CAACGAACGATCGGTATTGT ATGA ATAACACCGATCGTTCGTTG CCCCACCCGGCGCTT TERM 2110 1642800 - 1642763 - R 100 -16.5 -3.83844 | opp_overlap 1642767, overlap 1642760 1642788 CGGAGTAATTAACAA CGAACGATCGGTATTGT ATGA ATAACACCGATCGTTCG TTGCCCCACCCGGCG TERM 2111 1642767 - 1642796 + r 73 -10.1 -3.33696 | opp_overlap 1642763 1642760 1642788 GTAATTAACAACGAA CGATCGGTATTGT ATGA ATAACACCGATCG TTCGTTGCCCCACCC CKO_01718 1643831 - 1642938 - | hypothetical protein CKO_01719 1643957 - 1644808 + | hypothetical protein TERM 2112 1644858 - 1644832 - T 91 -6.5 -5.50499 | opp_overlap 1644835, overlap 1644835 TCATAGCCAAAAAAA TAACCCCGGCA GAGCG TGTCGGGGTTT TCTGTTGGTGTTAAT TERM 2113 1644835 - 1644855 + T 93 -10.4 -4.73094 | opp_overlap 1644832 1644835 TAGCCAAAAAAATAA CCCCGGCA GAGCG TGTCGGGG TTTTCTGTTGGTGTT TERM 2114 1644855 - 1644835 - T 88 -8.2 -4.8236 | opp_overlap 1644835, overlap 1644832 TAGCCAAAAAAATAA CCCCGGCA GAGCG TGTCGGGG TTTTCTGTTGGTGTT CKO_01720 1645118 - 1644900 - | hypothetical protein CKO_01721 1645598 - 1645188 - | hypothetical protein CKO_01722 1648651 - 1645595 - | hypothetical protein CKO_01723 1648865 - 1649977 + | putative inner membrane protein TERM 2115 1649984 - 1650012 + T 75 -11 -2.94679 | opp_overlap 1649981, overlap 1649981 CATAAATAAACCCCA TCGGCCTATCGA CGCAT TCGGTCGGCCGA TACTTTAGCATTGCT TERM 2116 1650246 - 1650267 + T 88 -5.8 -5.47821 | overlap 1650247 GCTGTGTGTAGTCTT TGCCCATC TCCCAC GATGGGCC TTTTTTTAAGTGCCT TERM 2117 1650247 - 1650266 + T 77 -9.3 -3.87608 | overlap 1650246 CTGTGTGTAGTCTTT GCCCATC TCCCAC GATGGGC CTTTTTTTAAGTGCC TERM 2118 1650390 - 1650369 - T 100 -8.7 -5.78622 | GCATCGCAAAAAAAA CGGCTCC TTTTTACG GGAGCCG TTGCGGATTAGAATC TERM 2119 1650404 - 1650419 + T 75 -3.2 -5.15969 | opp_overlap 1650404 CGTTGCGGATTAGAA TCAGCG CTGA CGCTTA TTTTTTCAGTTCAGC CKO_01725 1652795 - 1650417 - | phosphoenolpyruvate synthase CKO_01726 1652842 - 1652985 + | hypothetical protein CKO_01727 1653131 - 1653964 + | hypothetical protein TERM 2120 1654011 - 1654033 + F 93 -14.2 -3.59979 | TCATGCCGCTCTGCT TGCGAGGTGT GAA ACGCCTCGCA TTTGAAATCAGCAGG CKO_01728 1654130 - 1655176 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2121 1655157 - 1655169 + TF 74 -5.5 -4.63527 | AAAAACTTGCCTCAG CGGTT GAT AGCCG TTTTTGACATCATGC TERM 2122 1655180 - 1655207 + TF 70 -9.8 -2.96031 | opp_overlap 1655182, overlap 1655179 AGCCGTTTTTGACAT CATGCCCATCCT CGCG GGGATGGGCGCG CTTCTTTCCCCTCCA CKO_01730 1655349 - 1655179 - | hypothetical protein TERM 2123 1655501 - 1655474 - gR 77 -11.4 -3.15861 | gap 1, opp_overlap 1655473 1655472 1655476 CATGACGGCCAGGAA TACCTG-CTGCGC AAG ACGCAGGCAGGTA AGTTGCTGTTGACCA CKO_01729 1655330 - 1655521 + | hypothetical protein CKO_01731 1656820 - 1655525 - | hypothetical protein TERM 2124 1656177 - 1656155 - G 77 -8.4 -4.12532 | overlap 1656156 GTGGTTACAGATAAA CCCTGGCTGA TAA TCATCCAGGA AACCGAAAGGACCAT CKO_01732 1657742 - 1657029 - | hypothetical protein TERM 2125 1657228 - 1657242 + g 74 -4.3 -4.82901 | GAAAGACTTGCGGAT CTTTG CTGGA CAAAG TTTTTATCCAGCGCG CKO_01733 1658013 - 1657870 - | hypothetical protein CKO_01734 1658546 - 1658082 - | hypothetical protein TERM 2126 1658253 - 1658238 - G 74 -2.4 -5.00616 | overlap 1658240 TCCGGTTTTAAAAAA GACCAG GTCG CCGGGC AGCAGTTCATCTTTG CKO_01735 1659374 - 1658625 - | vitamin B12-transporter ATPase CKO_01736 1659937 - 1659374 - | putative glutathione peroxidase CKO_01737 1660875 - 1659973 - | hypothetical protein TERM 2127 1660028 - 1660000 - G 74 -7.3 -4.09685 | opp_overlap 1660027, overlap 1660002 1660023 1660024 TGCGAGTGTTGAAAA CAGCGACTCCCCG ATG CGGACAATCGCGG CGTCACGCTGCGCCA CKO_01738 1661870 - 1660881 - | vtamin B12-transporter permease TERM 2128 1661930 - 1661944 + r 100 -12.8 -4.88407 | opp_overlap 1661930 ACAGGAAAGAAAAAA GGCCGC AAA GCGGCC TTTTTAGTTAGATCA TERM 2129 1661944 - 1661930 - R 100 -12.8 -5.69793 | opp_overlap 1661930 ACAGGAAAGAAAAAA GGCCGC AAA GCGGCC TTTTTAGTTAGATCA CKO_01739 1662261 - 1661962 - | integration host factor subunit alpha CKO_01740 1664653 - 1662266 - | phenylalanyl-tRNA synthetase subunit beta CKO_01741 1665664 - 1664669 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2130 1665710 - 1665751 + r 73 -2.4 -5.10877 | gap 2, opp_overlap 1665724, overlap 1665724 TTAATCTCTCGATTT CAGGTACAAAAAAAGCCTCC ATCA GGAGGC-TTTTTCGCG-CTG TTTTTCGTTTCTTCT TERM 2131 1665739 - 1665724 - R 100 -10.4 -5.64274 | opp_overlap 1665710 1665724 TCAGGTACAAAAAAA GCCTCC ATCA GGAGGC TTTTTCGCGCTGTTT TERM 2132 1665724 - 1665739 + r 93 -10.4 -4.62904 | opp_overlap 1665724, overlap 1665710 TCAGGTACAAAAAAA GCCTCC ATCA GGAGGC TTTTTCGCGCTGTTT TERM 2133 1665948 - 1665926 - R 100 -12 -5.02323 | opp_overlap 1665928, overlap 1665928 GCACTACAAATAAAA GAGAGGGAGC CAG GCTCCCTCTT TTCACTGGCTTATGC TERM 2134 1665946 - 1665928 - R 100 -14.6 -4.12652 | opp_overlap 1665928, overlap 1665926 ACTACAAATAAAAGA GAGGGAGC CAG GCTCCCTC TTTTCACTGGCTTAT TERM 2135 1665928 - 1665946 + r 100 -14.6 -4.21676 | opp_overlap 1665928 1665926 ACTACAAATAAAAGA GAGGGAGC CAG GCTCCCTC TTTTCACTGGCTTAT CKO_01742 1666314 - 1665958 - | 50S ribosomal protein L20 TERM 2136 1666708 - 1666683 - gR 93 -9.7 -4.65916 | opp_overlap 1666682 1666681 1666677, overlap 1666684 CCCAGGCGAACAAAA TCTGTGAAGCC CGAA GGCTCCACAGG AATTGCTACTTGAAG TERM 2137 1666707 - 1666684 - gR 88 -13.2 -3.39068 | opp_overlap 1666682 1666681 1666677, overlap 1666683 CCAGGCGAACAAAAT CTGTGAAGCC CGAA GGCTCCACAG GAATTGCTACTTGAA CKO_01744 1667161 - 1666727 - | translation initiation factor IF-3 CKO_01743 1666316 - 1667113 + | hypothetical protein CKO_01745 1669141 - 1667273 - | threonyl-tRNA synthetase TERM 2138 1668272 - 1668282 + g 74 -2.4 -5.00616 | ATCTTTGTAGTTTTC CCAG TGC CCGG TTTTTTCCCACAGCA TERM 2139 1668745 - 1668729 - G 70 -9.5 -3.44284 | overlap 1668727 TTCTCATCAAGAATA GAAACCT TAT AGGTTTC TCCACGCTTCACGAA CKO_01746 1669709 - 1669344 - | hypothetical protein TERM 2140 1669796 - 1669770 - R 100 -13 -4.74504 | ACGCTAATTTAAAAA GCCGGGTCGTGT TTA AAACAACCCGGC AGGCGATTACATCTT CKO_01747 1670561 - 1669803 - | hypothetical protein TERM 2141 1670605 - 1670589 - H 100 -10.1 -5.88565 | CGTACAACAAAAAAA GAGACCG TTA CGGTCCC GGAAACTTTCATAAG TERM 2142 1671426 - 1671416 - g 72 -2.4 -4.90917 | AAACCGAACCAAAAA GAGC TGA GCGC GCTGGTTAATCGCGA TERM 2143 1671736 - 1671719 - g 70 -9.9 -3.34895 | GCGACGTTGAATCAA GGAACAC GTCT GTGTTCC CGGGACGATACGCAG CKO_01748 1670849 - 1671778 + | 6-phosphofructokinase 2 TERM 2144 1671787 - 1671808 + F 75 -10.1 -3.53012 | TCAGTGATCGGCCAT CCCCCTCCT TATT ACGAGGGGG TTTCAGCAGCAAAGC TERM 2145 1672082 - 1672110 + G 100 -16.7 -3.64703 | opp_overlap 1672077 GAAGATGAGATCGCC GCGCTTACCGCCG GGC TGGCGGAAAGCGC TTTAGATAAGAAACC CKO_01749 1671884 - 1672171 + | hypothetical protein TERM 2146 1672367 - 1672403 + G 81 -3.7 -5.15634 | gap 1, opp_overlap 1672367, overlap 1672367 1672371 1672392 TGCCCGGCGGAGAGA TC-CATGCCGCATGGC ATTTAC GCTATGCGGGACGCGA TTTTTTCGTCAAATG CKO_01750 1672267 - 1673142 + | hypothetical protein TERM 2147 1673184 - 1673211 + T 84 -10.6 -3.83844 | gap 1, opp_overlap 1673184 1673171, overlap 1673185 ATGCACTGAACCACA GGCCCGATAAGCG AAG CGCT-ATCGGGCA TTCTTCATTGCTACA TERM 2148 1673211 - 1673184 - T 72 -10.6 -2.92371 | gap 1, opp_overlap 1673184 1673185, overlap 1673171 ATGCACTGAACCACA GGCCCGATAAGCG AAG CGCT-ATCGGGCA TTCTTCATTGCTACA TERM 2149 1673185 - 1673210 + T 84 -14.1 -2.89824 | gap 1, opp_overlap 1673184 1673171, overlap 1673184 TGCACTGAACCACAG GCCCGATAAGCG AAG CGCT-ATCGGGC ATTCTTCATTGCTAC CKO_01751 1673758 - 1673222 - | hypothetical protein CKO_01752 1673907 - 1674575 + | 2-deoxyglucose-6-phosphatase TERM 2150 1674583 - 1674604 + F 87 -10.1 -4.25283 | GCGGTTAAATAGCGA CGGGCGGTG GCGA CATTGCCCG TTTTGCTACGCACAT CKO_01753 1674724 - 1675485 + | hypothetical protein TERM 2151 1675592 - 1675604 + G 100 -7.7 -5.16572 | overlap 1675588 TTTATCATGACGGCG GAAGG CCA CCTTC TTTTTTCCATTGCCT CKO_01754 1675583 - 1676173 + | hypothetical protein CKO_01755 1676306 - 1677697 + | hypothetical protein TERM 2152 1677716 - 1677732 + T 100 -9.4 -5.61596 | opp_overlap 1677716 CGCGTGATGAACAAA CCGCCT TAATC AGGCGG TTTTTTTATGCGAAT TERM 2153 1677732 - 1677716 - T 83 -9.4 -4.24342 | opp_overlap 1677716 CGCGTGATGAACAAA CCGCCT TAATC AGGCGG TTTTTTTATGCGAAT CKO_01756 1677989 - 1677747 - | cell division modulator CKO_01757 1678167 - 1678021 - | hypothetical protein TERM 2154 1678148 - 1678128 - G 74 -7.5 -4.17048 | overlap 1678129 GGGCGGGTAAAACAA GCGCCGTCA GGC TGACGGCAT AAAAAATGCGGCGCA TERM 2155 1678147 - 1678129 - G 72 -11 -3.09908 | overlap 1678128 GGCGGGTAAAACAAG CGCCGTCA GGC TGACGGCA TAAAAAATGCGGCGC TERM 2156 1678176 - 1678155 - G 100 -15.9 -5.26316 | TGACGGCATAAAAAA TGCGGCGCA GCAA TGCGCCGCA AACTCAGGAGTCAGA CKO_01758 1678945 - 1678187 - | hypothetical protein TERM 2157 1678805 - 1678842 + g 83 -12.8 -3.31144 | gap 1, opp_overlap 1678803 GTCACGGCACAATTG CGCCGCATGGTCGATGG CGTCA CCATTGACCA-GCGCCG TTGTGGACGTCACAA CKO_01759 1680313 - 1678958 - | hypothetical protein TERM 2158 1680376 - 1680392 + r 73 -10.8 -3.01712 | CGTTCGTCAGGTATG GCGCGG ACGTC CCGCGC TATTCAGGGCAAGCG CKO_01760 1681279 - 1680437 - | DNA-binding transcriptional regulator ChbR TERM 2159 1680564 - 1680583 + g 74 -2.1 -5.01732 | overlap 1680547 1680566 ATATCCGTTACGGAG TAGTTGG TCATTT CCAGCTG TTTTTTCGCAAAATT TERM 2160 1681170 - 1681182 + g 70 -3.4 -4.79352 | TGCTGATGCAGCCCA CTGA TGCTC TCAG TTTTGTTATAGATAA CKO_01761 1681637 - 1681287 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA TERM 2161 1681652 - 1681686 + r 76 -9.3 -3.72363 | overlap 1681657 TACGTTTTCCTCTGG TTCAGCCCGGCATGG GGAGA CCATGCCGGATTAAA TTTAAAATTTCAGTG TERM 2162 1681657 - 1681681 + r 77 -11.4 -3.29613 | overlap 1681652 TTTCCTCTGGTTCAG CCCGGCATGG GGAGA CCATGCCGGA TTAAATTTAAAATTT CKO_01762 1683046 - 1681688 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC TERM 2163 1682936 - 1682957 + g 77 -4.4 -4.90013 | CCCCGCAAGGGTTAA CGGCATTA AGCGAA TAAAGCCG TTTTTGATTGCATTA TERM 2164 1683086 - 1683064 - R 72 -9.2 -3.64192 | opp_overlap 1683063 1683062 1683060, overlap 1683066 AAAAATACCCTTAAA TACCGCAATA AAA TATTGCGGTG AATGTTTATGAAATA TERM 2165 1683084 - 1683066 - R 82 -11.8 -3.38603 | opp_overlap 1683063 1683062 1683060, overlap 1683064 AAATACCCTTAAATA CCGCAATA AAA TATTGCGG TGAATGTTTATGAAA CKO_01763 1683468 - 1683133 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB TERM 2166 1683722 - 1683707 - R 100 -7.5 -5.84381 | opp_overlap 1683707 CCAGGAACAAAAAAA CCGGC ACACAG GCCGG TTCATACATATGCTC CKO_01764 1684095 - 1683754 - | DNA-binding transcriptional activator OsmE TERM 2167 1684130 - 1684148 + H 70 -2.3 -5.00616 | opp_overlap 1684145, overlap 1684131 CAGCGTGTTATATAA GCCTGGA ATACA TCAGGGC TTTTTTCAAGCCCAC TERM 2168 1684288 - 1684273 - H 71 -7.6 -3.88498 | opp_overlap 1684272 CGTTTAGAGAGCAAA GCGTTA GCTT TAACGC AGTATATTTATTCTG TERM 2169 1684960 - 1684948 - gH 70 -4.7 -4.39998 | opp_overlap 1684956, overlap 1684949 CATTTATATAAGAAA GCGCC AAC GGCGG ATCTCGAAGACGATC TERM 2170 1685062 - 1685048 - gH 77 -7.8 -4.27584 | overlap 1685049 ATCTGGAAGGGAAAA CGCTGG ATG CCAGCA TCGCGAAAATCATCG CKO_01765 1684324 - 1685154 + | NAD synthetase CKO_01766 1685129 - 1685350 + | hypothetical protein TERM 2171 1685387 - 1685374 - T 71 -9.5 -3.23274 | opp_overlap 1685372 1685382, overlap 1685370 GGCCCGATAAGCGAA GCGCC ATCG GGCGC CGTCCTGTTACACTT CKO_01767 1685976 - 1685401 - | hypothetical protein TERM 2172 1685837 - 1685826 - G 78 -5.8 -4.74801 | overlap 1685834 CAACCCCAGGAAAAA GGGA AAAC TCCC CGTTCCCGGCGATAG TERM 2173 1686118 - 1686069 - R 100 -18 -5.64321 | opp_overlap 1686069, overlap 1686109 AGAAGAAAAGAAAAA CCGCCGATCCTGTCCACATC GAGAAGAGAT GTTGTGAACAGGACCGGCGG TCTTGAATGCGTTAG TERM 2174 1686069 - 1686118 + r 88 -14.3 -3.1085 | opp_overlap 1686069 1686109 AGAAGAAAAGAAAAA CCGCCGATCCTGTCCACATCG AGAAGAGA TGTTGTGAACAGGACCGGCGG TCTTGAATGCGTTAG CKO_01768 1686637 - 1686149 - | periplasmic protein TERM 2175 1686668 - 1686680 + r 73 -10.5 -3.02511 | TTTCAGTTATTCTTT CGGCG TAG CGCCG TGTTGACGAGATAAA CKO_01769 1686863 - 1686717 - | hypothetical protein TERM 2176 1686782 - 1686759 - G 73 -5.4 -4.63993 | AAGTGTAAAAAACAA TTTTTCGTCA ATTA TGAAGAAAAA AAGAATAAATCGAGG TERM 2177 1686954 - 1686929 - R 82 -7.5 -4.59846 | overlap 1686930 1686931 AGCACACAAAAATAA GCCCCTCAGAC GTTC GCCTGAGGGAG AAAATAATTATGCGA TERM 2178 1686953 - 1686930 - R 79 -11 -3.34281 | overlap 1686929 1686931 GCACACAAAAATAAG CCCCTCAGAC GTTC GCCTGAGGGA GAAAATAATTATGCG TERM 2179 1686952 - 1686931 - R 78 -12.3 -2.59484 | overlap 1686930 1686929 CACACAAAAATAAGC CCCTCAGAC GTTC GCCTGAGGG AGAAAATAATTATGC CKO_01770 1687930 - 1686962 - | succinylglutamate desuccinylase TERM 2180 1687153 - 1687142 - G 73 -5.8 -4.4458 | opp_overlap 1687144, overlap 1687144 CATACAGAGAACAAA CGCA TCGC TGCG GCGTGTAATTTGCGC CKO_01771 1689266 - 1687923 - | succinylarginine dihydrolase TERM 2181 1688808 - 1688796 - G 71 -4.7 -4.59773 | overlap 1688797 GTGCACTGCGAAAAA CTGCG CGT CGCGG AAGATGGCCCGCAAC TERM 2182 1688844 - 1688827 - G 86 -10.5 -4.15222 | ATGGCCCGCAACAAA GACGCCG TGGT CGGCGCC TCCAGCGCGCGGTGA CKO_01772 1690741 - 1689263 - | hypothetical protein TERM 2183 1689426 - 1689448 + g 74 -7.6 -4.20918 | opp_overlap 1689419, overlap 1689427 CCGCCAAACGGCGCC GTGCTGGCCG CTC CGGTCAGCGG TTTGTTCCAGTTAAC TERM 2184 1689427 - 1689447 + g 72 -11.1 -3.12069 | opp_overlap 1689419, overlap 1689426 CGCCAAACGGCGCCG TGCTGGCCG CTC CGGTCAGCG GTTTGTTCCAGTTAA TERM 2185 1689590 - 1689578 - G 70 -9.1 -3.73072 | AATGGCTTCATCAAA GCGCT CAT AGCGC CAGACGCTCAATAAC TERM 2186 1690014 - 1690026 + g 76 -3.3 -5.09426 | TTATTCCCTCCCATT TCCAG CGC CAGGA TTTTTTCCGGTTGCC TERM 2187 1690130 - 1690093 - G 75 -6.2 -4.56597 | gap 1, opp_overlap 1690096, overlap 1690094 CGCTGCCGGTAAAAA GCAGGCCGTCAAGCGCG TCCAG CGCGC-TGAGCGCCTGT CCCGTTTCGCGCCCT TERM 2188 1690129 - 1690094 - G 70 -9.7 -3.33744 | gap 1, opp_overlap 1690096, overlap 1690093 GCTGCCGGTAAAAAG CAGGCCGTCAAGCGCG TCCAG CGCGC-TGAGCGCCTG TCCCGTTTCGCGCCC CKO_01773 1691772 - 1690738 - | arginine succinyltransferase CKO_01774 1692989 - 1691769 - | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 2189 1692948 - 1692925 - G 76 -5.2 -4.78753 | opp_overlap 1692924, overlap 1692927 CGAACAGGAATAAAA GGTGCCGG GGCATAGA CCGGCATC ATCCATTCATCAAAA TERM 2190 1693141 - 1693120 - gR 80 -4.3 -4.98531 | opp_overlap 1693120, overlap 1693124 TTTGGAAACGAAAAA TCAACGGGT TACA ACCCGCCGG TATTCACTATTGCTG TERM 2191 1693137 - 1693124 - gR 74 -8.1 -3.90592 | opp_overlap 1693120, overlap 1693120 GAAACGAAAAATCAA CGGGT TACA ACCCG CCGGTATTCACTATT CKO_01776 1693293 - 1693120 - | hypothetical protein CKO_01775 1693035 - 1693196 + | hypothetical protein TERM 2192 1693295 - 1693313 + FH 73 -4.4 -4.75372 | overlap 1693297 TCGTTATGACGCACT CCGCCCTG AAA CAGTGCAG TTTTTGCTCCATCGT CKO_01777 1693435 - 1694241 + | exonuclease III TERM 2193 1694634 - 1694649 + G 86 -7.5 -4.74013 | CGTAAATCATGGTAT GGCGC GCGACG GCGCC TTTTATCTGTTTGCG CKO_01778 1694251 - 1694925 + | hypothetical protein TERM 2194 1695777 - 1695761 - gf 77 -7.9 -4.26076 | overlap 1695763 TCATGCGCAGCAAAA GATCGCC AGC GGCGAAC TGCCCAAAACCAGCT TERM 2195 1695775 - 1695763 - gf 76 -9.1 -3.7331 | overlap 1695761 ATGCGCAGCAAAAGA TCGCC AGC GGCGA ACTGCCCAAAACCAG TERM 2196 1695873 - 1695854 - gf 88 -12.8 -3.56099 | CACAATCCCGGCAAA CGCCCGCG CCAG CGCAGGCG CAAAGGTGGTTGCCA TERM 2197 1695987 - 1695971 - gf 90 -13.7 -3.31144 | opp_overlap 1695955 GCTTGACCCGCATAA GCTGCCC GCC GGGCAGC GGGAAGCGTTACGGT CKO_01779 1694940 - 1696103 + | hypothetical protein TERM 2198 1696346 - 1696329 - gf 70 -9.8 -3.04398 | opp_overlap 1696320, overlap 1696328 GGCCTGGCGCAAAAT GGGCGC GTCTTT GCGCCC GCCTCCCCTGGCTAC CKO_01780 1696076 - 1697611 + | hypothetical protein TERM 2199 1697703 - 1697689 - g 80 -4.2 -5.0538 | opp_overlap 1697668 1697689, overlap 1697690 TTTCAGGTCAAAAAA GGTGAC ATT GTCACG TTAATGGGACCCTCC CKO_01781 1697611 - 1698243 + | hypothetical protein CKO_01782 1698234 - 1698404 + | hypothetical protein TERM 2200 1698587 - 1698569 - gT 81 -12.4 -3.1733 | overlap 1698567 1698566 GGCTCGATAAAATGA GCGACGAG CAG CTCGCCGC CTGGCTGCAACGGCA TERM 2201 1698827 - 1698801 - gT 89 -9.4 -4.63218 | CGCCCTTCAACAAAA CCAGCCGGTT ACGGCTA AACCGGCGGG AGACTGGAAGGTGAT TERM 2202 1699611 - 1699596 - gT 71 -4.6 -4.62783 | overlap 1699597 CAGCGATCCGAAAAA TCCGGT GTCC ACCGGC GAGCGCGACCCGGAC CKO_01783 1698349 - 1699638 + | hypothetical protein CKO_01784 1700363 - 1699728 - | hypothetical protein TERM 2203 1700209 - 1700192 - G 84 -12.7 -3.4252 | overlap 1700177 GGCGATTCAGCACAA TGGCCGC CAGC GCGGCCA GATACCAGCCCAGCG CKO_01785 1700802 - 1700356 - | hypothetical protein TERM 2204 1700724 - 1700703 - G 71 -10.1 -3.56643 | overlap 1700719 GGCACACCTGCGAAA CGCGCGTCA TCAA CAACGCGCG CATCACCGGCGTTAA TERM 2205 1700836 - 1700797 - G 77 -7.2 -4.28188 | gap 2 CAGCCAGAACAGAAA CGGCATTC-GC-CCCCAC CAGCGC GTGGGGTGCAGAACGTCG CCGTAATGTTTTTTC CKO_01787 1701067 - 1700900 - | hypothetical protein CKO_01786 1700996 - 1701418 + | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase CKO_01788 1701653 - 1701378 - | hypothetical protein CKO_01789 1701890 - 1703233 + | glutamate dehydrogenase TERM 2206 1703312 - 1703278 - T 70 -9.3 -3.30124 | gap 2, opp_overlap 1703308 1703310, overlap 1703279 TTGTAGGCCTGATAA GCGCAGCGCCATCAGGC ATT GCCGGATGACG--GCGC AAGTGCCTTATCAGG TERM 2207 1703313 - 1703279 - T 70 -10.6 -2.57931 | opp_overlap 1703308 1703310, overlap 1703278 TGTAGGCCTGATAAG CGCAGCGCCATCAGGC ATT GCCGGATGACGGCGCA AGTGCCTTATCAGGC TERM 2208 1703342 - 1703364 + T 95 -7.7 -5.41143 | gap 1 GCCTGTGCGTTATAC GCTCGCC-TC TTCT GACGGCGGGC TTTTTTTCGCCGCTC CKO_01790 1705279 - 1703336 - | DNA topoisomerase III TERM 2209 1705048 - 1705064 + g 74 -7.9 -4.07885 | opp_overlap 1705047 TCGTCACGGAAGGAC GTGGCTG GAG CTGCCAC TTTTCCGGCACAATC TERM 2210 1705245 - 1705196 - G 86 -12.3 -3.89346 | gap 3, opp_overlap 1705196 1705244 CCCGCATTCGATAAA GCCGTCGCCTTTGCGG-TGCGGCT TTGGC AG-CACATCCGCAATGGCG-CGGC CCAGACTCGGCTTTT CKO_01791 1706333 - 1705284 - | selenophosphate synthetase TERM 2211 1706475 - 1706444 - R 77 -11.6 -2.76696 | gap 1, overlap 1706443 1706465 GTTTTGCCGAATAAT CGGCAGGCG-CTCAT CGA AAAAGCCGCCTGCCG GGGCCATGACGCTTA CKO_01792 1707039 - 1706488 - | hypothetical protein TERM 2212 1706793 - 1706805 + g 86 -10.5 -4.15664 | opp_overlap 1706792 1706791 GCGGCGCGCGAAATG GCGCG GTG CGCGC TTTCTCTATCGCTTT TERM 2213 1708178 - 1708210 + Gr 91 -14.2 -3.03124 | gap 1, opp_overlap 1708178, overlap 1708182 ATTATTCGCTGAAAA CGCCTGCCGATACCG GCGA CGGTATCGGC-GTCG TGTTCGCCAATGGCG TERM 2214 1708210 - 1708178 - gR 100 -14.2 -4.08945 | gap 1, opp_overlap 1708178 1708182 ATTATTCGCTGAAAA CGCCTGCCGATACCG GCGA CGGTATCGGC-GTCG TGTTCGCCAATGGCG TERM 2215 1708182 - 1708207 + Gr 90 -15.5 -2.74192 | opp_overlap 1708178, overlap 1708178 TTCGCTGAAAACGCC TGCCGATACCG GCGA CGGTATCGGCG TCGTGTTCGCCAATG TERM 2216 1708746 - 1708715 - gR 73 -10.9 -2.73994 | gap 1, opp_overlap 1708713, overlap 1708712 ATGCGCGTAAGAGCA CCCCGGCGCAGATT GATAA AATC-GCGCAGGGG CATGTCTGGACCGGT CKO_01795 1709158 - 1709021 - | hypothetical protein CKO_01793 1707220 - 1709076 + | protease 4 CKO_01794 1709078 - 1709176 + | hypothetical protein TERM 2217 1709639 - 1709650 + G 78 -5.8 -4.68593 | opp_overlap 1709629 1709639 1709638 AATTACCCCATCAAT GAGG TCAC CCTC TTTTTCAATAATCGG CKO_01796 1709204 - 1710220 + | cytoplasmic asparaginase I TERM 2218 1710394 - 1710409 + G 74 -10.4 -3.53012 | GCCAGGACTGGCATC CTGCCG GACA CGGCAG TTTCGCCAGCCAGCA CKO_01797 1710231 - 1710872 + | nicotinamidase/pyrazinamidase TERM 2219 1711000 - 1711022 + T 73 -11.4 -2.63089 | opp_overlap 1711002, overlap 1710999 1711002 TTCAGCGTCGCAATC GATTTTGGCG CAA TGCCAAAATC CTCTTTCAACTGCTG CKO_01798 1711253 - 1710978 - | hypothetical protein CKO_01799 1711738 - 1711295 - | methionine sulfoxide reductase B TERM 2220 1711827 - 1711842 + H 88 -7.6 -5.00642 | opp_overlap 1711826 TGGCAGCTTATGAAT CGTGAT CGGA ATCACG TTTTTATCTCAGTTG TERM 2221 1711978 - 1711994 + H 72 -2.9 -5.09245 | ATTGACACGATTCCG CTTGACG CTG CGTAAGG TTTTTGTAATTTTAC CKO_01800 1712050 - 1713045 + | hypothetical protein TERM 2222 1713088 - 1713072 - f 100 -13.7 -4.15854 | opp_overlap 1713072 AAATTGATCCCAAAA GGCGACC TCC GGTCGCC TTTTTTTATGGCTAA TERM 2223 1713072 - 1713088 + F 100 -13.7 -5.64274 | opp_overlap 1713072 AAATTGATCCCAAAA GGCGACC TCC GGTCGCC TTTTTTTATGGCTAA CKO_01801 1713130 - 1714014 + | hypothetical protein CKO_01803 1714163 - 1714011 - | hypothetical protein TERM 2224 1714194 - 1714165 - gR 100 -15.1 -3.62275 | opp_overlap 1714171, overlap 1714166 1714171 ATGCACCACCGCAAA GCAAAACAGGGCG CAAG CGCCCTGTTTTGA TGCACGAATTGCACT TERM 2225 1714193 - 1714166 - gR 100 -18.6 -2.77043 | opp_overlap 1714171, overlap 1714165 1714171 TGCACCACCGCAAAG CAAAACAGGGCG CAAG CGCCCTGTTTTG ATGCACGAATTGCAC TERM 2226 1714188 - 1714171 - gR 100 -12.7 -4.55798 | opp_overlap 1714171, overlap 1714166 1714165 CACCGCAAAGCAAAA CAGGGCG CAAG CGCCCTG TTTTGATGCACGAAT TERM 2227 1714171 - 1714188 + Gr 100 -12.7 -4.25283 | opp_overlap 1714171 1714166 1714165 CACCGCAAAGCAAAA CAGGGCG CAAG CGCCCTG TTTTGATGCACGAAT CKO_01802 1714038 - 1714250 + | hypothetical protein CKO_01804 1714970 - 1714224 - | hypothetical protein CKO_01805 1715195 - 1715070 - | hypothetical protein TERM 2228 1715118 - 1715134 + g 91 -7.3 -4.90778 | CAGTCGGATGAACGC GGGATGA CTT TCATCTC TTTTCTTTACATAAC TERM 2229 1716366 - 1716353 - g 74 -4.5 -4.72127 | CAACAACAAAAATAA CGAAG CCTT CCTCG ACCGTGTTTACATCG CKO_01806 1715403 - 1717337 + | hypothetical protein TERM 2230 1717379 - 1717347 - f 79 -9.2 -4.06384 | opp_overlap 1717352 TCTTAACAGCATAAA TGGCCCGGAAAA TTTTATCCG TTTACCGGGCCA ACAATTCTTTTGTAC TERM 2231 1718002 - 1717990 - g 75 -6.9 -4.4767 | opp_overlap 1717990 TTACTGAGTATAAAA CCCAC CGC GCGGG TTTTACCTCCAACGG CKO_01807 1717524 - 1718825 + | hypothetical protein TERM 2232 1718847 - 1718875 + T 100 -13.3 -4.46233 | opp_overlap 1718852, overlap 1718852 GTCCGTCAGGTCAGT AAAAAGCCAGAAC CCT GTTCTGGCTTTTC TTTATTTCCCCTTAA TERM 2233 1718852 - 1718870 + T 100 -13.2 -5.18866 | opp_overlap 1718852, overlap 1718847 TCAGGTCAGTAAAAA GCCAGAAC CCT GTTCTGGC TTTTCTTTATTTCCC TERM 2234 1718870 - 1718852 - T 100 -13.2 -4.7373 | opp_overlap 1718847 1718852 TCAGGTCAGTAAAAA GCCAGAAC CCT GTTCTGGC TTTTCTTTATTTCCC CKO_01808 1719647 - 1718877 - | hypothetical protein TERM 2235 1719414 - 1719429 + g 85 -6.8 -4.89852 | overlap 1719395 1719396 CGCAACATTGTTCCG CGCGTT TGCC AGCGCG TTTTTATCCATATCG CKO_01809 1719819 - 1721306 + | hypothetical protein TERM 2236 1721800 - 1721781 - g 71 -4.4 -4.56597 | gap 1 GGCGTGCTGGAAAAA TCGGTCATT ATG AAT-ACCGA CGATTACCTGCGCAT CKO_01810 1721352 - 1721855 + | hypothetical protein TERM 2237 1722146 - 1722108 - f 76 -2.5 -5.28176 | gap 1, opp_overlap 1722138 GTTATTGATAAAAAA GCCTGTTCACT-CACG TATTTGCG CGTACAGTAAGCAGGC TTATCTTTCTCTGGC CKO_01811 1722174 - 1722620 + | hypothetical protein CKO_01812 1723395 - 1722604 - | hypothetical protein TERM 2238 1724356 - 1724370 + G 70 -9.2 -3.64915 | overlap 1724366 TCGCTCATGTGCGCT CTCGGC GCG GCCGGG TTCTGGTTTGTGCCG CKO_01813 1723492 - 1724679 + | hypothetical protein TERM 2239 1724683 - 1724708 + T 73 -4.6 -4.84359 | opp_overlap 1724685, overlap 1724685 1724686 GCAGCAAAATAACCG AACGGGCAGG CATTGA CCTGCCCCTG TTTTTATCCCCGTGC TERM 2240 1724685 - 1724706 + T 71 -7.2 -4.04397 | opp_overlap 1724685, overlap 1724683 1724686 AGCAAAATAACCGAA CGGGCAGG CATTGA CCTGCCCC TGTTTTTATCCCCGT TERM 2241 1724686 - 1724705 + T 73 -10.7 -3.01915 | opp_overlap 1724685, overlap 1724685 1724683 GCAAAATAACCGAAC GGGCAGG CATTGA CCTGCCC CTGTTTTTATCCCCG CKO_01814 1725419 - 1724712 - | hypothetical protein CKO_01815 1725528 - 1725653 + | hypothetical protein TERM 2242 1725903 - 1725877 - g 82 -11.5 -3.79445 | AAGCAGGAAGGTAAA CGGCTGGCGGA TATTG CCCGCCAGCAG ACGCTGACCCTGCTA CKO_01816 1725637 - 1725984 + | hypothetical protein TERM 2243 1726037 - 1726008 - T 76 -8.5 -4.14013 | gap 1, opp_overlap 1726006, overlap 1726000 1725998 1726010 1726011 CAAAATCCGCCAAAA CACGGCGCACGCGC AAA GCG-ATGCGCCAGG TATCACTTACCGCTG TERM 2244 1726035 - 1726010 - T 79 -9.7 -3.65832 | gap 1, opp_overlap 1726006, overlap 1726000 1725998 1726008 1726011 AAATCCGCCAAAACA CGGCGCACGCGC AAA GCG-ATGCGCCA GGTATCACTTACCGC TERM 2245 1726034 - 1726011 - T 74 -11 -2.78776 | gap 1, opp_overlap 1726006, overlap 1726000 1725998 1726010 1726008 AATCCGCCAAAACAC GGCGCACGCGC AAA GCG-ATGCGCC AGGTATCACTTACCG CKO_01817 1726414 - 1726040 - | hypothetical protein TERM 2246 1726678 - 1726662 - R 93 -10.1 -4.70107 | opp_overlap 1726662 TATCAAAATAATAAA GGCCACC AAC GGTAGCC TTTTCGTCTTACGAA TERM 2247 1726662 - 1726678 + r 79 -7.9 -4.4261 | opp_overlap 1726662 TATCAAAATAATAAA GGCCACC AAC GGTAGCC TTTTCGTCTTACGAA CKO_01818 1726951 - 1726703 - | hypothetical protein TERM 2248 1727031 - 1727044 + r 75 -3.1 -5.22104 | AGAGAATTGAAATTT GTGAT AAAT GTCAC TTTTATTATTTTTTA TERM 2249 1727185 - 1727206 + r 100 -12.3 -5.82388 | gap 1 GCTTCCAGTATTTTT GCCCGC-CTC ACT GAGTGCGGGC TTTTTTTTGACGTTT CKO_01820 1727357 - 1727220 - | hypothetical protein TERM 2250 1728940 - 1728954 + G 70 -5.6 -4.37886 | opp_overlap 1728920 TCTGGGATGAGATGC GCGAAC TGT GTCCGC TTTTCTACGGCGTCA CKO_01821 1727418 - 1729565 + | hypothetical protein TERM 2251 1729583 - 1729612 + T 90 -10.7 -4.25104 | overlap 1729584 CGCGCTGTGCCTGTT AGCCCGGGTTC GGGAAAAA GAACCCGGGCG TTTTCATCAGCGAAC TERM 2252 1729584 - 1729611 + T 86 -14.2 -3.14848 | overlap 1729583 GCGCTGTGCCTGTTA GCCCGGGTTC GGGAAAAA GAACCCGGGC GTTTTCATCAGCGAA CKO_01822 1730285 - 1729629 - | hypothetical protein TERM 2253 1730432 - 1730460 + r 75 -9.5 -3.60475 | opp_overlap 1730432 CAGGCGAAAAAAAAA CCGCCCAGCGT CGTGATA GCGCTGTGCGG TTTAGCGTAACGGTT TERM 2254 1730460 - 1730432 - R 100 -8.8 -6.09133 | opp_overlap 1730432 CAGGCGAAAAAAAAA CCGCCCAGCG TCGTGATAG CGCTGTGCGG TTTAGCGTAACGGTT CKO_01823 1730691 - 1730509 - | hypothetical protein CKO_01824 1730922 - 1730695 - | hypothetical protein CKO_01825 1731867 - 1731229 - | leucine export protein LeuE TERM 2255 1731827 - 1731816 - G 72 -2.2 -4.93296 | CCAGCACGATAAAAA TGGC CCCA ACCA GATACGTCCAGTAGT TERM 2256 1732063 - 1732040 - g 79 -13.8 -2.80074 | overlap 1732037 1732035 GCCGTCACAACACGA TGGCGGGTCC TGCC GGGCCCGCCA TAATAACAACATCTT CKO_01826 1731934 - 1732080 + | hypothetical protein CKO_01827 1732688 - 1732077 - | hypothetical protein TERM 2257 1732833 - 1732814 - R 100 -10.7 -5.39755 | opp_overlap 1732814 1732813 GAGAAGCATAAAAAA CGGGAGC ACACAG GCTCCCG CTTATTCCAACAAAC TERM 2258 1732814 - 1732833 + r 72 -10.7 -2.76696 | opp_overlap 1732814, overlap 1732813 GAGAAGCATAAAAAA CGGGAGC ACACAG GCTCCCG CTTATTCCAACAAAC CKO_01828 1735329 - 1732864 - | hypothetical protein TERM 2259 1733004 - 1733014 + g 71 -4.6 -4.59773 | CCGCCGTCAGCACGT TGGC GCC GCCG TTTTTACAGATGCCA TERM 2260 1735188 - 1735210 + g 70 -7 -4.07568 | overlap 1735181 1735180 1735189 1735194 CCCAACGTGCGGCAG TCAGGATGGC GCC GCCATTTTGG TTTTCGGCCCAGGCA TERM 2261 1735194 - 1735204 + g 78 -6.8 -4.67038 | overlap 1735181 1735180 1735189 1735188 GTGCGGCAGTCAGGA TGGC GCC GCCA TTTTGGTTTTCGGCC CKO_01829 1736291 - 1735329 - | hypothetical protein TERM 2262 1736394 - 1736404 + H 85 -5.4 -5.3167 | overlap 1736397 GCAAAGCAGCATCGT CCAT AAA ATGG TTTTATTTATTTTTC TERM 2263 1736397 - 1736409 + H 74 -3.5 -5.00267 | overlap 1736394 AAGCAGCATCGTCCA TAAAA TGG TTTTA TTTATTTTTCTCATT CKO_01830 1736955 - 1737383 + | hypothetical protein TERM 2264 1737409 - 1737428 + T 100 -15 -3.88232 | opp_overlap 1737409 TAACCCTGGCGAAAA CGGGAGCC AACA GGCTCCCG TTCTTGTATCACACC TERM 2265 1737428 - 1737409 - T 100 -15 -4.08692 | opp_overlap 1737409 TAACCCTGGCGAAAA CGGGAGCC AACA GGCTCCCG TTCTTGTATCACACC TERM 2266 1737602 - 1737621 + T 100 -10.7 -5.40474 | TTCCAGTATGATTTT GCCCGCA CTCTGT TGCGGGC TTTTTTTGCCAGAGT TERM 2267 1738005 - 1738024 + T 83 -10 -4.17309 | opp_overlap 1738005 ACTGGCATAAAAAAA CGGGAACT GACA GGTTCCCG TTCTTGTTTATCCTC TERM 2268 1738024 - 1738005 - T 100 -9.3 -5.61596 | opp_overlap 1738005 ACTGGCATAAAAAAA CGGGAAC TGACAG GTTCCCG TTCTTGTTTATCCTC CKO_01832 1738181 - 1738050 - | hypothetical protein TERM 2269 1738272 - 1738285 + r 75 -9.5 -3.53012 | opp_overlap 1738272 ATTATTGACCAGTAA CCGCC CGGA GGCGG TTTGAAACCAGGAAA TERM 2270 1738285 - 1738272 - R 71 -9.5 -3.22476 | opp_overlap 1738272 ATTATTGACCAGTAA CCGCC CGGA GGCGG TTTGAAACCAGGAAA CKO_01833 1739120 - 1738305 - | hypothetical protein TERM 2271 1739503 - 1739520 + rH 74 -7.1 -4.25104 | opp_overlap 1739502 TTAAGCACAATTGAG GTTATGT TATT ACATAAC TTTTAGTGAGAAGGG TERM 2272 1739945 - 1739926 - RH 100 -11.4 -5.95946 | opp_overlap 1739926 CTAATAATAAAAAAA CGGGAACC CTTT GGCTCCCG TTCTTGTTTAACCCA TERM 2273 1739926 - 1739945 + rH 79 -9.2 -4.08557 | opp_overlap 1739926 CTAATAATAAAAAAA CGGGAACC CTTT GGCTCCCG TTCTTGTTTAACCCA CKO_01835 1741220 - 1739970 - | isocitrate dehydrogenase CKO_01834 1741162 - 1741386 + | hypothetical protein TERM 2274 1741445 - 1741433 - g 76 -2.7 -5.11613 | overlap 1741434 ATACCATGCAAAAAA CTTCT TTT AGAAA TCACCGGGTTGAGCG CKO_01836 1741393 - 1742046 + | hypothetical protein CKO_01837 1742056 - 1742517 + | hypothetical protein TERM 2275 1743254 - 1743233 - g 70 -2.9 -4.7497 | overlap 1743236 CGCAGCCAGGAAAAA TTATCACCG TAGA CGGCGACGA AATCGGTCAGCACCA CKO_01838 1742527 - 1743678 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase CKO_01839 1743708 - 1744355 + | hypothetical protein CKO_01840 1744359 - 1745729 + | adenylosuccinate lyase CKO_01841 1747370 - 1746105 - | DNA polymerase V subunit UmuC CKO_01842 1747789 - 1747373 - | DNA polymerase V subunit UmuD CKO_01843 1748027 - 1748452 + | hypothetical protein CKO_01844 1748449 - 1749369 + | hypothetical protein CKO_01845 1749366 - 1750964 + | hypothetical protein TERM 2276 1751000 - 1750959 - T 78 -5.2 -4.95547 | gap 1, opp_overlap 1750967 1750970, overlap 1750967 1750970 TTTACAAGAAGAAAA TCATGATAGAAGGGGCCGC ATAAA ACGGCCCCTTCT-TATTAA ACTATATTACCCACA TERM 2277 1750967 - 1750993 + T 100 -15.2 -3.6796 | opp_overlap 1750959 1750967 1750970, overlap 1750970 AAGAAAATCATGATA GAAGGGGCCG CATAAAA CGGCCCCTTC TTATTAAACTATATT TERM 2278 1750993 - 1750967 - T 93 -15.9 -2.93712 | opp_overlap 1750967 1750970, overlap 1750959 1750970 AAGAAAATCATGATA GAAGGGGCCGC ATAAA ACGGCCCCTTC TTATTAAACTATATT TERM 2279 1750990 - 1750970 - T 86 -11.8 -3.59405 | opp_overlap 1750970 1750967, overlap 1750967 1750959 AAAATCATGATAGAA GGGGCCGC ATAAA ACGGCCCC TTCTTATTAAACTAT TERM 2280 1750970 - 1750990 + T 87 -11.1 -3.96469 | opp_overlap 1750967 1750959 1750970, overlap 1750967 AAAATCATGATAGAA GGGGCCG CATAAAA CGGCCCC TTCTTATTAAACTAT CKO_01846 1753033 - 1750997 - | hypothetical protein TERM 2281 1753056 - 1753073 + r 85 -12.7 -3.44362 | opp_overlap 1753056, overlap 1753047 TCATAAAATAGAAAA CCCGCGA TTAT TCGCGGG TTCTGAATGTTATCT TERM 2282 1753073 - 1753056 - R 100 -12.7 -4.94487 | opp_overlap 1753056 1753047 TCATAAAATAGAAAA CCCGCGA TTAT TCGCGGG TTCTGAATGTTATCT CKO_01847 1753620 - 1753099 - | hypothetical protein CKO_01848 1756296 - 1753663 - | hypothetical protein CKO_01849 1756757 - 1756377 - | hypothetical protein CKO_01850 1757255 - 1756767 - | hypothetical protein CKO_01851 1757716 - 1757252 - | hypothetical protein TERM 2283 1757609 - 1757591 - G 73 -5.8 -4.41348 | overlap 1757587 1757593 CGGTGTCGAAATAAA CGCGCGGC GCT GACGGGCG CGGCCGGTGGTCATT CKO_01853 1760757 - 1757716 - | hypothetical protein TERM 2284 1758321 - 1758335 + grH 76 -5.6 -4.72272 | overlap 1758314 TCATTGATGCAGACG CGCCAG CCG CTGCCG TTTTTCCTACAAGCA TERM 2285 1758894 - 1758879 - GRH 79 -7.6 -4.3767 | opp_overlap 1758872, overlap 1758875 GCAGACCAGAAGAAA GCGTAT TTTT ATACGC TGTCAACTTATCAAC CKO_01854 1760975 - 1760685 - | hypothetical protein TERM 2286 1760797 - 1760779 - GgR 72 -3.7 -4.82901 | opp_overlap 1760780 1760781, overlap 1760781 CTCCGGGCATAAAAA TACCCGG ACATA CCGGGCT TATTGTTTCTGTTTG TERM 2287 1760795 - 1760781 - GgR 76 -8.5 -4.03995 | opp_overlap 1760780 1760781, overlap 1760779 CCGGGCATAAAAATA CCCGG ACATA CCGGG CTTATTGTTTCTGTT CKO_01852 1760726 - 1760938 + | hypothetical protein CKO_01855 1761620 - 1761117 - | hypothetical protein TERM 2288 1761636 - 1761607 - G 100 -10.6 -5.14563 | TCCTGCATGAAAAAA GCCCGCGCCGCC ATGCAG AGCGGAACGGGC AAGGGAAATTTTATG CKO_01856 1762807 - 1761647 - | hypothetical protein CKO_01857 1763226 - 1762834 - | hypothetical protein CKO_01858 1763774 - 1763223 - | hypothetical protein CKO_01859 1763973 - 1763767 - | hypothetical protein CKO_01860 1764368 - 1763973 - | hypothetical protein CKO_01861 1764594 - 1764343 - | hypothetical protein CKO_01862 1765006 - 1764596 - | hypothetical protein CKO_01863 1765303 - 1765010 - | hypothetical protein TERM 2289 1765335 - 1765322 - R 90 -9.5 -4.54727 | opp_overlap 1765322 CCCTCCAAAGGAAAA GGGGC CGAA GCCCC TTGTGTGTGATGGTG TERM 2290 1765322 - 1765335 + r 75 -9.5 -3.62616 | opp_overlap 1765322 CCCTCCAAAGGAAAA GGGGC CGAA GCCCC TTGTGTGTGATGGTG CKO_01864 1766487 - 1765351 - | hypothetical protein TERM 2291 1766324 - 1766355 + g 75 -12.4 -2.89742 | gap 1, overlap 1766328 GGTACGATATCCTCG GTAACTGCTTCCGGT GCG ACCGGC-GCAGTTAC TGTCTGCCCCTTCGC CKO_01865 1767374 - 1766574 - | hypothetical protein TERM 2292 1767042 - 1767068 + g 81 -2.3 -5.31877 | gap 1, overlap 1767061 GATTTCGGCTTTCAC CTGGTCAACTGC GCCA GCA-TCGATCAG TTTTTTCTGGTCGAT TERM 2293 1767061 - 1767082 + g 74 -6.6 -4.33708 | overlap 1767042 TCAACTGCGCCAGCA TCGATCAG TTTTTT CTGGTCGA TTTTGGTCATCATTT TERM 2294 1767423 - 1767406 - R 100 -10.5 -5.24129 | opp_overlap 1767406 1767404 TGCGGCCATAAAAAA GGCCGCC CGGA GGCAGCC TGTTGTGAATTTCAG TERM 2295 1767446 - 1767469 + r 81 -5.2 -5.09762 | opp_overlap 1767450, overlap 1767450 AATTTCAGATAATAA AAAAGGCCGC CTTA GCGACCTTTC TTTTTGTATTCCCGT TERM 2296 1767465 - 1767450 - R 100 -8.2 -5.60689 | opp_overlap 1767446 1767450 TCAGATAATAAAAAA GGCCGC CTTA GCGACC TTTCTTTTTGTATTC TERM 2297 1767450 - 1767465 + r 80 -6 -5.05037 | opp_overlap 1767450, overlap 1767446 TCAGATAATAAAAAA GGCCGC CTTA GCGACC TTTCTTTTTGTATTC CKO_01866 1767603 - 1767457 - | hypothetical protein CKO_01867 1768712 - 1767600 - | hypothetical protein CKO_01868 1770102 - 1768699 - | hypothetical protein TERM 2298 1768997 - 1769020 + g 84 -8.8 -4.29738 | opp_overlap 1768997 GCATCCTCCAGAGAA CTCGCCATGG TGTA CAGTGGCGAG TTTTCCTGCATATGC TERM 2299 1769046 - 1769058 + g 72 -4.1 -4.77983 | TATGCTCTTCATGCG TCTGG TCG TCAGA TTTTGTTGATGTGTT CKO_01869 1771677 - 1770106 - | hypothetical protein TERM 2300 1770191 - 1770217 + g 72 -3.7 -4.8048 | gap 1, overlap 1770192 TCCCAGTCGTGATCT TCCTGTTG-CGT GTCA ACGTCATCAGGG TTTTTGCTGTCGCGG TERM 2301 1770297 - 1770315 + g 100 -7.4 -5.15969 | AAAACGCAGGTTTTT CTGGTATC CCG GATTCCAG TTTTTTACCTTCGAC TERM 2302 1771102 - 1771116 + g 81 -2.1 -5.40474 | overlap 1771091 AGTTCCGCGCGGTGC CGGTT CGATA AATCG TTTTTTTACCCAGGT CKO_01870 1772162 - 1771674 - | hypothetical protein CKO_01871 1772833 - 1772195 - | hypothetical protein CKO_01873 1773076 - 1772837 - | hypothetical protein TERM 2303 1773216 - 1773235 + Gr 89 -3.4 -5.45813 | opp_overlap 1773219, overlap 1773218 1773219 GGTGATGCCAACAAA AAACCGCC CGGA GGCGGCTA TTTTATTTTTTAGTA TERM 2304 1773218 - 1773233 + Gr 71 -6 -4.32882 | opp_overlap 1773219, overlap 1773216 1773219 TGATGCCAACAAAAA ACCGCC CGGA GGCGGC TATTTTATTTTTTAG TERM 2305 1773232 - 1773219 - gR 100 -9.5 -5.46657 | opp_overlap 1773219 1773218 1773216 GATGCCAACAAAAAA CCGCC CGGA GGCGG CTATTTTATTTTTTA TERM 2306 1773219 - 1773232 + Gr 71 -9.5 -3.17289 | opp_overlap 1773219, overlap 1773218 1773216 GATGCCAACAAAAAA CCGCC CGGA GGCGG CTATTTTATTTTTTA CKO_01874 1773564 - 1773238 - | hypothetical protein CKO_01872 1773055 - 1773339 + | hypothetical protein CKO_01875 1774260 - 1773709 - | hypothetical protein CKO_01876 1774787 - 1774257 - | hypothetical protein CKO_01877 1775089 - 1774784 - | hypothetical protein TERM 2307 1775209 - 1775195 - RH 100 -9.2 -5.72622 | GGCACAAATAAAAAA CCCGCC AGA AGCGGG AATAGAAGATAAGCG CKO_01879 1775628 - 1775278 - | hypothetical protein TERM 2308 1775639 - 1775620 - Gg 77 -8.5 -4.17701 | opp_overlap 1775620, overlap 1775616 TCCAGAAACGACAAA GCCCCGC ACGATG GCGAGGC TTTAAGTTCGTCGAC CKO_01878 1775347 - 1775697 + | hypothetical protein CKO_01880 1776386 - 1775703 - | hypothetical protein CKO_01881 1776547 - 1776383 - | hypothetical protein CKO_01882 1776906 - 1776520 - | hypothetical protein CKO_01884 1777259 - 1776903 - | hypothetical protein CKO_01885 1777537 - 1777256 - | hypothetical protein CKO_01883 1777041 - 1777448 + | hypothetical protein CKO_01886 1777746 - 1777540 - | hypothetical protein CKO_01887 1778345 - 1777746 - | hypothetical protein CKO_01888 1778631 - 1778383 - | hypothetical protein CKO_01890 1778994 - 1778749 - | hypothetical protein CKO_01889 1778674 - 1778907 + | hypothetical protein CKO_01891 1779136 - 1779011 - | hypothetical protein TERM 2309 1779099 - 1779112 + g 76 -9.5 -3.84246 | opp_overlap 1779099 TCAGGCGTAAAAAAA CCCGC CGAA GCGGG TTTAATCATTAAGAG TERM 2310 1779112 - 1779099 - G 100 -9.5 -5.42259 | opp_overlap 1779099 TCAGGCGTAAAAAAA CCCGC CGAA GCGGG TTTAATCATTAAGAG CKO_01892 1779749 - 1779519 - | hypothetical protein CKO_01893 1780478 - 1779912 - | hypothetical protein CKO_01894 1780640 - 1781221 + | hypothetical protein TERM 2311 1781816 - 1781794 - g 83 -7.8 -4.58395 | opp_overlap 1781794 GTTACTTGGCAAAAA GTGGTTTTAT CTA AAAAAACCAC TTCATAGATGCCATT CKO_01895 1781218 - 1781823 + | hypothetical protein CKO_01896 1783074 - 1781830 - | hypothetical protein CKO_01898 1783484 - 1783071 - | hypothetical protein CKO_01899 1783741 - 1783481 - | hypothetical protein CKO_01897 1783131 - 1783568 + | hypothetical protein TERM 2312 1783598 - 1783615 + gT 74 -11.3 -2.79796 | overlap 1783587 CTGCTCTACCGCTAC GCGGAGA TATT TCTCCGC TGTGGTCCGGTGCAG CKO_01900 1784431 - 1783745 - | hypothetical protein TERM 2313 1784454 - 1784469 + r 72 -6.1 -4.33258 | CCTCTCAAATCAGTC CAGCG TCTTTT CGCTG TTTGTATTTCGCCAT CKO_01901 1785132 - 1784443 - | hypothetical protein CKO_01902 1786127 - 1785129 - | hypothetical protein CKO_01903 1786497 - 1786243 - | hypothetical protein CKO_01904 1787001 - 1786507 - | hypothetical protein TERM 2314 1787562 - 1787537 - g 90 -5.3 -5.1861 | opp_overlap 1787540 1787552, overlap 1787538 GTTATTAGCAAAAAA TCAGCACTGGC TATA GCCGATGCTGT TGGCGTTTCGATCGC TERM 2315 1787561 - 1787538 - g 70 -8.8 -3.70443 | opp_overlap 1787540 1787552, overlap 1787537 TTATTAGCAAAAAAT CAGCACTGGC TATA GCCGATGCTG TTGGCGTTTCGATCG CKO_01905 1787387 - 1787770 + | hypothetical protein TERM 2316 1787969 - 1787928 - g 70 -8.9 -3.7347 | gap 1, overlap 1787929 TTCAATAGGTAATAA CCCCAGCATTAAAGAAA-TC ATT GAGTCTCTTCAAGGCTGGGA AGCTATTATCAAACA TERM 2317 1788177 - 1788167 - g 72 -2.4 -4.93365 | opp_overlap 1788167 TCGGAGAAGGAAAAA TGCG TAG CGCC TTAGTTTGGACGGTT CKO_01906 1787863 - 1788777 + | hypothetical protein TERM 2318 1788784 - 1788801 + TF 100 -9.8 -5.11112 | opp_overlap 1788784 1788780 GCGGAATGAAATTAA CCCGGC CACCGC GCCGGG TTTTTATTGCCCTTT TERM 2319 1788801 - 1788784 - Tf 75 -9.8 -3.61468 | opp_overlap 1788784, overlap 1788780 GCGGAATGAAATTAA CCCGGC CACCGC GCCGGG TTTTTATTGCCCTTT TERM 2320 1789124 - 1789148 + GT 100 -7.2 -6.09133 | gap 2, opp_overlap 1789113, overlap 1789145 TATATCCGACTTACA GCCCGGATTACG ACA CGT--TCCGGGC TTTTTTTTTGCCCTA CKO_01908 1789370 - 1789161 - | hypothetical protein CKO_01907 1788971 - 1789264 + | hypothetical protein CKO_01909 1789572 - 1789916 + | hypothetical protein CKO_01912 1790055 - 1789870 - | hypothetical protein CKO_01910 1789909 - 1790037 + | hypothetical protein CKO_01911 1790037 - 1790222 + | hypothetical protein CKO_01914 1790427 - 1790188 - | hypothetical protein CKO_01913 1790232 - 1790390 + | hypothetical protein CKO_01915 1790478 - 1790765 + | hypothetical protein TERM 2321 1790788 - 1790772 - f 86 -9.4 -4.45544 | GTTCATTAAGCAAAA GCCCAC ACGAA GTGGGC CTGCCCGTCCGGCGT TERM 2322 1791467 - 1791457 - g 84 -3.2 -5.36965 | GAAGAGCAGAAAAAA GCAA TTC TCGC TCTGGAAATGGACAC CKO_01916 1790893 - 1793805 + | hypothetical protein TERM 2323 1794668 - 1794658 - g 76 -5.4 -4.71061 | ATCGAGACCGAAAAA CCAA TAC TTGG CACAGCTCTATACAC CKO_01917 1793818 - 1794906 + | hypothetical protein TERM 2324 1794934 - 1794911 - Tf 83 -13.8 -2.52543 | opp_overlap 1794924 1794926 ACGTGGGCTAAGGGA GGCGGGAGGG CGGC CCCTCCCGTC ACAGGGGGTTATATG CKO_01920 1795257 - 1795123 - | hypothetical protein CKO_01918 1794947 - 1795186 + | hypothetical protein CKO_01919 1795251 - 1795466 + | hypothetical protein TERM 2325 1795522 - 1795547 + G 70 -9.8 -3.31322 | gap 1 CAGGATCACATTTAT CTATCGCGGCA TTCGT TGCCGCGA-AG TTCTCCAGGGTTGGG TERM 2326 1795605 - 1795589 - g 100 -7.9 -5.28683 | AGCAATATTAAAAAA GCGGGCA ATC TGCGCGC GGCAATTGTGAGTGA TERM 2327 1795937 - 1795924 - g 72 -3.7 -4.75404 | overlap 1795925 AAACCGCATCAAAAA TGGGC GCGC GCCCT CAACAGTCAATAAAC CKO_01921 1795466 - 1796752 + | hypothetical protein CKO_01922 1796823 - 1797497 + | DNA-binding transcriptional regulator PhoP TERM 2328 1797738 - 1797705 - g 74 -2.5 -5.093 | overlap 1797709 GGCAAAACAATAAAA TCAATATCGAGATCC CGGA AAATCTCGATATGCA AAGCCCCACGATGAC TERM 2329 1798348 - 1798338 - g 77 -8.2 -4.13014 | opp_overlap 1798337 CCCATAGTCTGAAAA CGCC GCT GGCG GTATTGCAGAGCACC TERM 2330 1798407 - 1798389 - g 82 -5.2 -5.08824 | overlap 1798390 1798392 TGCGCAGCGAAAAAA TGAGCGTC AGC GACGCCGA ACCGGTCATGCTGGA CKO_01923 1797497 - 1798960 + | sensor protein PhoQ CKO_01924 1799766 - 1799122 - | hypothetical protein CKO_01925 1799791 - 1800174 + | hypothetical protein CKO_01926 1801500 - 1800274 - | peptidase T CKO_01927 1801751 - 1802887 + | putrescine/spermidine ABC transporter ATPase protein CKO_01928 1802871 - 1803728 + | spermidine/putrescine ABC transporter membrane protein CKO_01929 1803725 - 1804504 + | spermidine/putrescine ABC transporter membrane protein TERM 2331 1804509 - 1804495 - f 72 -8.5 -3.75115 | TCGTGATAAAACCAA GGGCC GTTGA GGCCC ACTATTCAGGGGACG CKO_01930 1804529 - 1805575 + | spermidine/putrescine ABC transporter periplasmic substrate-binding protein TERM 2332 1805619 - 1805594 - T 70 -9.7 -2.94411 | gap 1, overlap 1805593 AGCGTTGTAAAGAAT GCCCGAT-GGCG CTG CGCTTATCGGGC CTGGATAAATGCAAA CKO_01931 1806390 - 1805677 - | hypothetical protein CKO_01932 1807425 - 1806514 - | N-acetyl-D-glucosamine kinase TERM 2333 1807326 - 1807344 + g 78 -6.6 -4.56597 | AAGCCTCATAGCCTT CGCGTGGC GTC GGTACGCG TTTTTCCCAGCGCAA CKO_01933 1808639 - 1807458 - | outer membrane-specific lipoprotein transporter subunit LolE CKO_01934 1809403 - 1808702 - | lipoprotein transporter ATP-binding subunit CKO_01935 1810703 - 1809396 - | outer membrane-specific lipoprotein transporter subunit LolC TERM 2334 1809771 - 1809759 - G 83 -10.5 -4.01737 | AGTAATAATATTAAA CGCCG CCA CGGCG ACGATCAGGCTTAAC CKO_01936 1810857 - 1811930 + | hypothetical protein TERM 2335 1811935 - 1811956 + F 90 -15.9 -2.67803 | overlap 1811933 1811931 ATTCGCGTTAATCTT TTCGCCCCC TCCC GGGGGCGAA TCAATTTGCTAAAGA TERM 2336 1812379 - 1812421 + G 71 -8.4 -3.90744 | opp_overlap 1812392 1812394, overlap 1812376 1812380 AGCGCGGCGTATTGA TTGTTCCGGTAAATACGCTG ATG CAGCGCGTTTGCCCGCACAG TTATTTGCACGGCCA TERM 2337 1813177 - 1813164 - g 78 -5.9 -4.72986 | opp_overlap 1813165 CAGGCGCAGCAAAAA GCGCC GCTG GACGC GCTGCGTAGGTTTCT TERM 2338 1815186 - 1815170 - g 74 -4.4 -4.77757 | overlap 1815171 1815174 TGCGAAAAACGAAAA CGAGCT GGAGG AGCTCA AGGTAGAGCTGATCG CKO_01937 1812060 - 1815506 + | transcription-repair coupling factor TERM 2339 1815521 - 1815494 - T 84 -8.4 -4.68103 | gap 1, overlap 1815495 1815496 1815509 GCAACTGGAAGAAAA CGCGGCGGCGTAA CAT CTACGACGCCG-G ATGGCGGCGCAAGCG TERM 2340 1815520 - 1815496 - T 76 -12.1 -2.6336 | overlap 1815494 1815495 1815509 AACTGGAAGAAAACG CGGCGGCGTAA CAT CTACGACGCCG GATGGCGGCGCAAGC CKO_01938 1815597 - 1815472 - | hypothetical protein CKO_01939 1815698 - 1815510 - | hypothetical protein TERM 2341 1815619 - 1815562 - GT 77 -12 -2.91274 | opp_overlap 1815579 CCTACGGGAAGCATA CCCTGTAGGCCCGGTAA-GCGCAGCGCC ACCG GGCACATCGCCTTATCCGGCCTAC-GGG AAGCATATCCTGTAG CKO_01940 1815757 - 1815548 - | hypothetical protein TERM 2342 1815820 - 1815831 + G 77 -3.6 -5.0538 | opp_overlap 1815810 AACATGCGACTTTCC CGCT GGCT GGCG TTTTTTACGCTCGCC CKO_01941 1815793 - 1816761 + | hypothetical protein TERM 2343 1816779 - 1816799 + T 100 -14 -5.252 | opp_overlap 1816779 TCGGATAATAAAAAA GCCCCGCT CAGAC AGCGGGGC TTTTTTGTGGCAGTA TERM 2344 1816799 - 1816779 - T 100 -14 -5.55769 | opp_overlap 1816779 TCGGATAATAAAAAA GCCCCGCT CAGAC AGCGGGGC TTTTTTGTGGCAGTA CKO_01942 1817098 - 1816841 - | hypothetical protein TERM 2345 1817384 - 1817373 - H 88 -3.6 -5.75342 | GTTGCGTAAAAAAAA GCCG TGGC CGAC CAAAAGTGTTCGACA CKO_01943 1817390 - 1817974 + | hypothetical protein TERM 2346 1818024 - 1817998 - T 100 -10.1 -5.60993 | CGTCTGATAAAAAAA GCCCCTCAGCC TGAGC GAATGAGGGGC TAACGTGCAGAGTAC CKO_01944 1818575 - 1818048 - | hypothetical protein CKO_01945 1818677 - 1818826 + | hypothetical protein CKO_01946 1820115 - 1818823 - | hypothetical protein TERM 2347 1819987 - 1820002 + g 76 -9 -4.03234 | overlap 1819996 ATGCAACAACGGCTT CCACAG ATGG CTGTGG TTTCTGTCCACCAGC CKO_01947 1820321 - 1820148 - | hypothetical protein TERM 2348 1820344 - 1820329 - R 100 -10.4 -5.61596 | opp_overlap 1820329 ATGCTCATAAAAAAA CCAGCC CGAA GGCTGG TTTCTGAGGGGGGTG TERM 2349 1820329 - 1820344 + r 84 -10.4 -3.86015 | opp_overlap 1820329 ATGCTCATAAAAAAA CCAGCC CGAA GGCTGG TTTCTGAGGGGGGTG CKO_01948 1820918 - 1820376 - | hypothetical protein CKO_01949 1821955 - 1820942 - | beta-hexosaminidase CKO_01950 1822544 - 1821978 - | thiamine kinase TERM 2350 1822773 - 1822752 - R 78 -12.3 -2.71483 | overlap 1822763 ATATTGCGGGAAGTA GCGCGACAA AACG TCGTCGCGC GTCAGTAGATTATTG CKO_01951 1823424 - 1822783 - | hypothetical protein CKO_01952 1823791 - 1823438 - | hypothetical protein CKO_01953 1824204 - 1823815 - | hypothetical protein TERM 2351 1824408 - 1824434 + H 90 -10.2 -4.27192 | opp_overlap 1824408 TGTTTACAGCATTAA TGCAAGTGCGTA TAT TTCGCATTTGCA TTTTCATGCGCATTT TERM 2352 1825472 - 1825484 + G 80 -9.1 -4.11692 | opp_overlap 1825482 ATAAAGTCTTTGTCA CGCTG AAG CAGCG TTTTGCGGATACCTG TERM 2353 1826360 - 1826370 + G 71 -8.2 -3.85817 | overlap 1826359 GGCAGATGACCTTCG GCGC AAC GCGC TTTATCGCGGAAGAT CKO_01954 1824478 - 1826727 + | ferric-rhodotorulic acid outer membrane transporter TERM 2354 1826747 - 1826764 + TF 100 -12.7 -5.1925 | opp_overlap 1826747 CGTCACTGACGAGAA GGGAGCC ATCT GGCTCCC TTTTTTACGTTCTCG TERM 2355 1826764 - 1826747 - Tf 85 -12.7 -3.4252 | opp_overlap 1826747 CGTCACTGACGAGAA GGGAGCC ATCT GGCTCCC TTTTTTACGTTCTCG CKO_01956 1826908 - 1826795 - | hypothetical protein CKO_01955 1826788 - 1826898 + | hypothetical protein TERM 2356 1826877 - 1826894 + gT 85 -12.7 -3.44146 | opp_overlap 1826877 ACACAGCGTAAAAAA GGCAGCC ATTT GGCTGCC TTAGTTCTCCCCAAC TERM 2357 1826894 - 1826877 - GT 100 -12.7 -5.08169 | opp_overlap 1826877 ACACAGCGTAAAAAA GGCAGCC ATTT GGCTGCC TTAGTTCTCCCCAAC CKO_01957 1828401 - 1826920 - | glucose-specific PTS system IIBC components TERM 2358 1828698 - 1828725 + r 76 -9.2 -3.82097 | gap 1, overlap 1828699 1828717 TGTTACAATTCGCTC ATTCACCGCC-CA TTT TGTGGCGGTGAAC TTTACTCGCTTTGAA TERM 2359 1828699 - 1828724 + r 79 -12.7 -2.88776 | gap 1, overlap 1828698 1828717 GTTACAATTCGCTCA TTCACCGCC-CA TTT TGTGGCGGTGAA CTTTACTCGCTTTGA CKO_01958 1829567 - 1828770 - | putative metallodependent hydrolase CKO_01959 1830582 - 1829578 - | DNA polymerase III subunit delta' CKO_01960 1831220 - 1830579 - | thymidylate kinase TERM 2360 1830761 - 1830776 + g 91 -11.8 -4.07885 | TGCGGTCAAGTTCGC CGCGCG CGCG CGCGCG TTTTAAGCCAACCTC TERM 2361 1831151 - 1831171 + g 89 -8.9 -4.57341 | GCTCAAGTGTCTCCA CCACCACGT TAC GCGCGGTGG TTTTTCCGGCGCCTT CKO_01961 1832232 - 1831210 - | hypothetical protein CKO_01962 1833044 - 1832235 - | hypothetical protein TERM 2362 1833137 - 1833121 - R 91 -7.2 -5.4756 | opp_overlap 1833121 AAGCTGAATAAAAAA GGCCCG ACAAG CGGACC TTTTTACTCTCTGGT TERM 2363 1833121 - 1833137 + r 76 -5 -4.85129 | opp_overlap 1833121 AAGCTGAATAAAAAA GGCCCG ACAAG CGGACC TTTTTACTCTCTGGT CKO_01963 1834366 - 1833161 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 2364 1833557 - 1833575 + g 88 -11.6 -4.08767 | opp_overlap 1833512, overlap 1833562 1833565 CGCATTGACCATCGC CAGCGCGG CGC CCGCGCCG TTTTCCGGCGGTGAC TERM 2365 1833648 - 1833658 + g 81 -8.2 -4.29325 | overlap 1833647 TCGGCATAAATTTTC GCGC CGC GCGC TTTTGCATGTTCGTA TERM 2366 1833733 - 1833758 + g 74 -10.3 -3.53366 | CGTCACGCTCTTTAT CCCACGGGCGG CTGG CCGCTTGCGGG TTATCATTACGTGTA TERM 2367 1834026 - 1834049 + g 81 -6.7 -4.68384 | opp_overlap 1834008 CTGATCTTACGCGGC CCACCGTTC ACCAGG GAACTGTGG TTTTCTTCGATCAGT TERM 2368 1834452 - 1834480 + r 71 -9.6 -3.15056 | gap 1, opp_overlap 1834453 1834455, overlap 1834450 GGACAAAAAGATAAA ACT-CAGGCGGTC GAAT GACCGCCTGGAGA TGTTCACTTACGCCT TERM 2369 1834479 - 1834453 - R 100 -13.1 -5.02287 | gap 1, opp_overlap 1834452 1834450, overlap 1834455 GACAAAAAGATAAAA CT-CAGGCGGTC GAAT GACCGCCTGGAG ATGTTCACTTACGCC TERM 2370 1834476 - 1834455 - R 90 -15.9 -2.72919 | opp_overlap 1834452 1834450, overlap 1834453 CAAAAAGATAAAACT CAGGCGGTC GAAT GACCGCCTG GAGATGTTCACTTAC CKO_01964 1834724 - 1834488 - | acyl carrier protein CKO_01965 1835610 - 1834876 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 2371 1835216 - 1835226 + g 91 -6.8 -5.1861 | opp_overlap 1835214 1835216 CCGATAGTGATAATA CGTC CAT GACG TTTTTTCATCATAGC CKO_01966 1836552 - 1835623 - | hypothetical protein CKO_01967 1837521 - 1836568 - | 3-oxoacyl-(acyl carrier protein) synthase III CKO_01968 1838647 - 1837598 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 2372 1837840 - 1837851 + g 90 -5.8 -5.24129 | TGAGGTGACTGAATC GCCT CGTC AGGC TTTTTTGTAACCAAC TERM 2373 1838621 - 1838592 - G 74 -10.7 -3.51032 | overlap 1838593 1838596 AGTTGCGAATTAGAA TTCAGTGCCTGCA GTGC TGCAGGCACTGTC ACGGAAGGGCCGAAA TERM 2374 1838620 - 1838593 - G 81 -14.2 -2.70298 | overlap 1838592 1838596 GTTGCGAATTAGAAT TCAGTGCCTGCA GTGC TGCAGGCACTGT CACGGAAGGGCCGAA TERM 2375 1838617 - 1838596 - G 81 -14.5 -2.63347 | overlap 1838593 1838592 GCGAATTAGAATTCA GTGCCTGCA GTGC TGCAGGCAC TGTCACGGAAGGGCC TERM 2376 1838741 - 1838756 + r 70 -9 -3.34895 | opp_overlap 1838725 CCTCACTAAGCTTCA TCACGC TTGC GCGTGA TTACTTAGCGATGAC CKO_01969 1839468 - 1838947 - | hypothetical protein TERM 2377 1839536 - 1839508 - H 83 -10.3 -3.74077 | opp_overlap 1839514, overlap 1839514 CGTCATAGAGTCAAA GAAAAAGGCAGCC TGC GGTTGCCTTTTGC CAATAATTCGCACAC TERM 2378 1839514 - 1839530 + H 83 -10.1 -4.12902 | opp_overlap 1839514 1839508 AGAGTCAAAGAAAAA GGCAGCC TGC GGTTGCC TTTTGCCAATAATTC TERM 2379 1839530 - 1839514 - H 95 -7.9 -5.31519 | opp_overlap 1839514, overlap 1839508 AGAGTCAAAGAAAAA GGCAGCC TGC GGTTGCC TTTTGCCAATAATTC CKO_01970 1839666 - 1840250 + | Maf-like protein TERM 2380 1840324 - 1840280 - gT 76 -9.4 -3.6692 | gap 1, overlap 1840278 1840281 GGCGACGCTAAAACA TCTTATCAGGCCCACAGCGGA GCAA TGC-CCGTAGGCCTGATAAGC ACAGCGCCATCAGTA TERM 2381 1840323 - 1840281 - gT 82 -12.9 -2.79831 | gap 1, overlap 1840280 1840278 GCGACGCTAAAACAT CTTATCAGGCCCACAGCGGA GCAA TGC-CCGTAGGCCTGATAAG CACAGCGCCATCAGT CKO_01973 1840403 - 1840272 - | hypothetical protein CKO_01972 1840250 - 1840387 + | hypothetical protein CKO_01974 1841363 - 1840410 - | 23S rRNA pseudouridylate synthase C TERM 2382 1840542 - 1840532 - G 74 -4.6 -4.82901 | CCGCGTGCAGAAAAA GCCG TGA CAGC CCCGTTCCCGCAAGC TERM 2383 1841909 - 1841878 - H 71 -9.7 -3.28712 | gap 1 CTGTTCCCCTGATAA TTGCGCTGTATTTC CGTAT GAAATACAG-GCAA CCGACACTCTGCGCC TERM 2384 1842987 - 1842965 - g 74 -11.2 -3.2794 | CGCGATTGATATTAA CTCCGCGCGT GCC ACACGCGGCG GCGATATCGAAGAAA TERM 2385 1843675 - 1843628 - g 72 -11.3 -3.03635 | TAAACGCCCTGAACA GCCAGCACTGGCGAC-CTTCGCG ATGC CG-GAAGTGCCGCCTGCGCCGAC GCCAGCAGAACCTGC TERM 2386 1843912 - 1843886 - g 71 -8.6 -3.78934 | GTCTCGCCAGAATAA TCGCCGCGACCG TAA CGATCGCCGTGA CAACCGTGATAATCG CKO_01975 1842051 - 1845248 + | ribonuclease E TERM 2387 1845290 - 1845273 - T 95 -12.7 -4.33928 | opp_overlap 1845273 GATGTTAAAGATAAA GCCGACC TGCG GGTCGGC TTTTTTGTACCTGCA TERM 2388 1845273 - 1845290 + T 100 -12.7 -5.28176 | opp_overlap 1845273 GATGTTAAAGATAAA GCCGACC TGCG GGTCGGC TTTTTTGTACCTGCA TERM 2389 1845369 - 1845341 - T 100 -13.2 -5.40072 | TTCCGGGCAAAAAAA TGCCCGCTCC GGGGTGAAG GGAGCGGGCA GACAAAACATACCCA CKO_01976 1846365 - 1845412 - | flagellar hook-associated protein FlgL TERM 2390 1845911 - 1845936 + g 74 -3.2 -4.89729 | overlap 1845912 GTGCCGCCGCTATAG TCGCCATTTG CCTGAT CAAACGGCGC TTTTTCAGTTTTATA CKO_01977 1848015 - 1846381 - | flagellar hook-associated protein FlgK CKO_01978 1849030 - 1848080 - | peptidoglycan hydrolase TERM 2391 1848511 - 1848522 + g 74 -7.2 -4.20516 | opp_overlap 1848510 CCAGAATCAGATGAT GCGG CACG CCGC TTTGTTCACTCGCCA CKO_01979 1850127 - 1849030 - | flagellar basal body P-ring protein CKO_01980 1850892 - 1850140 - | flagellar basal body L-ring protein TERM 2392 1850819 - 1850829 + g 70 -3.2 -4.75776 | ATAATCGGGTAATGG TGCG CAG CGTA TTTTTGCATTGCCTT TERM 2393 1850895 - 1850856 - G 86 -10.9 -4.11216 | gap 2, opp_overlap 1850883 1850885, overlap 1850859 CCTTCATCTTCAAAA TCAGTGT-G-CCGGTGAGG TTTC CCTCACCGGACGACACTTA GAGTTGCGTCAGTTT TERM 2394 1850892 - 1850859 - G 81 -12.6 -3.09004 | gap 2, opp_overlap 1850883 1850885, overlap 1850856 TCATCTTCAAAATCA GTGT-G-CCGGTGAGG TTTC CCTCACCGGACGACAC TTAGAGTTGCGTCAG CKO_01981 1851675 - 1850893 - | flagellar basal body rod protein FlgG CKO_01982 1852444 - 1851689 - | flagellar basal body rod protein FlgF CKO_01983 1853670 - 1852465 - | flagellar hook protein FlgE CKO_01984 1854395 - 1853697 - | flagellar basal body rod modification protein TERM 2395 1854148 - 1854176 + g 72 -3.7 -4.74504 | opp_overlap 1854156, overlap 1854155 1854156 CTGTTGTCGATCTGC CCGGAAATCGCGC CCA GCGTGGTGTTCAG TTTTTCAATTCCGCT CKO_01985 1854811 - 1854407 - | flagellar basal body rod protein FlgC CKO_01986 1855231 - 1854815 - | flagellar basal body rod protein FlgB TERM 2396 1855314 - 1855304 - H 71 -6.8 -4.1552 | TATCGCCGGAATAAA CGCA AAA TGCG TCGCTATTTGTTGCG TERM 2397 1855466 - 1855481 + G 70 -5.4 -4.39426 | TCAGGATCTGAATGC CCAGTT AACG GACTGG TTTTCTCAGCGTCTG CKO_01987 1855389 - 1856048 + | flagellar basal body P-ring biosynthesis protein FlgA CKO_01988 1856141 - 1856434 + | anti-sigma28 factor FlgM CKO_01989 1856439 - 1856861 + | hypothetical protein CKO_01990 1856803 - 1856958 + | hypothetical protein CKO_01992 1858457 - 1856964 - | hypothetical protein TERM 2398 1858392 - 1858380 - Gf 80 -6.2 -4.74801 | GAATGCCACGAAAAA GGCG TCGGT CGCC ATCCCTGCGCCAAAA CKO_01993 1858642 - 1858499 - | hypothetical protein CKO_01991 1858456 - 1858599 + | hypothetical protein CKO_01994 1859663 - 1858740 - | hypothetical protein TERM 2399 1859485 - 1859465 - G 81 -8.3 -4.26903 | TGGAGTGGACGAAAA TGGCGTC GCAGGTT GACGCCA GCGCTGGCAACGACT CKO_01995 1860312 - 1859665 - | hypothetical protein CKO_01996 1860715 - 1860323 - | hypothetical protein TERM 2400 1860642 - 1860630 - G 74 -3.3 -4.86001 | opp_overlap 1860630 ACTACGTTAGAAAAA TTGGC CAC GCCGA TGATCTCTTTCTCTT CKO_01998 1861371 - 1861117 - | hypothetical protein CKO_01997 1861268 - 1862476 + | multidrug resistance protein MdtH TERM 2401 1862705 - 1862679 - g 86 -3.6 -5.42259 | TGATCGGCAAAAAAA TGGCGCCCATTC TGC AAAAGGACGACA GCCGTTATCTGCCCG TERM 2402 1862877 - 1862899 + G 72 -12 -2.70932 | CGGCATTTGATGAGT TTTCCACGCC GTC GGCGCGGAAA TACTTCACCGAGAAA TERM 2403 1862987 - 1862977 - g 70 -3.2 -4.72272 | overlap 1862980 1862982 TGGGCTCATCAAAAA CATC AGC GACG ATCTGCGCGCGCTGG CKO_01999 1862588 - 1863187 + | glutaredoxin 2 TERM 2404 1863190 - 1863225 + G 81 -2.4 -5.32882 | gap 1, overlap 1863195 TATGGCCCTCTAATG CTTG-TGGGTGGAGGCG CCA TGCCGCCACCCTTTCAG TTTTTTCTGCTGGTG TERM 2405 1863195 - 1863219 + G 100 -13.5 -4.08285 | overlap 1863190 CCCTCTAATGCTTGT GGGTGGAGGCG CCA TGCCGCCACCC TTTCAGTTTTTTCTG TERM 2406 1863828 - 1863814 - g 95 -8.6 -5.00616 | GCGCTGGCGAAAAAA TATGCC AAA GGCATA GAGGTTAAACCGGGC CKO_02000 1863187 - 1863870 + | hypothetical protein TERM 2407 1863878 - 1863893 + F 100 -11.8 -5.86061 | opp_overlap 1863872 1863875 CCGACTAACGCACCA GGGCGC ATTT GCGCCC TTTTTTTTCGTGCAA CKO_02001 1863975 - 1865018 + | dihydroorotase CKO_02002 1865097 - 1865342 + | hypothetical protein TERM 2408 1865371 - 1865386 + GT 100 -11.8 -5.63517 | GTAATGTTCGTTTTT GCCGGG TCGC CCCGGC TTTTTTATTTGCGCA CKO_02004 1865486 - 1865391 - | hypothetical protein CKO_02003 1865359 - 1865460 + | hypothetical protein CKO_02005 1865633 - 1865887 + | biofilm formation regulatory protein BssS TERM 2409 1865929 - 1865912 - f 82 -11.3 -3.64822 | opp_overlap 1865912 ACCCCTCCACCCAAA GGCACCT TAAA AGGTGCC TTTATCGTTTCATAC TERM 2410 1865912 - 1865929 + F 89 -11.3 -4.15841 | opp_overlap 1865912 ACCCCTCCACCCAAA GGCACCT TAAA AGGTGCC TTTATCGTTTCATAC TERM 2411 1867126 - 1867157 + G 77 -8 -4.13767 | gap 1 GTATTGGGCGAGATT GCCGCCGATTT-CGC GCA GGGTAAATCGCCGGC TTTTGACCTGACGCC CKO_02006 1866082 - 1867200 + | N-methyltryptophan oxidase TERM 2412 1867209 - 1867228 + G 100 -9.2 -4.85782 | opp_overlap 1867202 1867204 1867209, overlap 1867210 GCAATAATGACCCAA TGGCCTCG CAAA CGGGGCCG TTTCTTTTTGAGGAG TERM 2413 1867210 - 1867227 + G 74 -10.5 -3.50746 | opp_overlap 1867202 1867204 1867209, overlap 1867209 CAATAATGACCCAAT GGCCTCG CAAA CGGGGCC GTTTCTTTTTGAGGA TERM 2414 1867287 - 1867308 + G 81 -8.1 -4.35042 | gap 1, opp_overlap 1867286, overlap 1867290 CTGATCAATAATATT CGT-GAGCAT TTT ATGCTCTACG TTATTTTATGGTCGC CKO_02007 1867200 - 1867364 + | hypothetical protein CKO_02009 1867637 - 1867512 - | hypothetical protein CKO_02008 1867627 - 1868199 + | hypothetical protein TERM 2415 1868401 - 1868390 - g 100 -5.8 -5.52384 | CTTCGATGAAAAAAA TCCG GCTG CGGA TAAAGTGAACGTCAC CKO_02010 1868196 - 1868771 + | hypothetical protein TERM 2416 1868970 - 1869006 + T 95 -14.3 -3.61715 | opp_overlap 1868954 1868974 TGTAGGCCCGGTAAG CGAAGCGCCACCGGGCG TAA TGCCGGATGGCGCTACG TTATTCCGCCGGGTC TERM 2417 1869002 - 1868974 - T 86 -13.8 -3.17075 | opp_overlap 1868970, overlap 1868954 GGCCCGGTAAGCGAA GCGCCACCGGGC GTAAT GCCGGATGGCGC TACGTTATTCCGCCG CKO_02011 1870059 - 1869007 - | hypothetical protein TERM 2418 1869090 - 1869108 + g 73 -10.2 -3.36273 | TGCCATTCTCACGGC CAGCGCGG CGA CGGCGCTG TTCCTCTTCCGGCAA TERM 2419 1869200 - 1869214 + g 71 -4.2 -4.67904 | opp_overlap 1869201, overlap 1869201 CACTGAATAAACAGC AGATGG CAG CCATCA TTTTTACAGTTGGTA TERM 2420 1869356 - 1869332 - G 71 -7.7 -3.95584 | TTCTTACCAATGAAA CGCACCGGCAG TCC CTGCTCGCGCG CCTTACGCGCGTACT CKO_02012 1870278 - 1871198 + | lipid A biosynthesis lauroyl acyltransferase TERM 2421 1871206 - 1871230 + TF 90 -13.6 -3.42346 | GTTACTGATTCATCA GGTGCAGCCG GGCGA CGGTTGCACC TTCTCATCGCCTCTT CKO_02015 1871399 - 1871277 - | hypothetical protein CKO_02013 1871268 - 1871375 + | hypothetical protein TERM 2422 1871408 - 1871423 + GH 76 -3.2 -5.00616 | overlap 1871410 1871415 AACGCAATCTCACCG TAGCCT GGCT GGGCTG TTTTTTGACCGGCGC TERM 2423 1871450 - 1871460 + GH 70 -3.2 -4.72846 | GCGCGGCGTTTAGCC TGGT GAT GCCA TTTTTACCTCTCTAC TERM 2424 1871782 - 1871794 + GH 71 -7.7 -3.96148 | AATAAGAGCGGCTGG GCGTT AGG AACGC TTTCTACTGGCGGCG TERM 2425 1871980 - 1871964 - gH 70 -2.9 -4.72272 | GCCTGTCAGCAAAAA GGAGATG TTG CACGTCC GGGAAGTCGTTGGCT TERM 2426 1872299 - 1872309 + GH 77 -4.6 -4.8622 | opp_overlap 1872284, overlap 1872291 CGCCCTGGCAGCTTG GCGT GCT GCGC TTTTTACTTGGCGCG CKO_02014 1871362 - 1872582 + | drug efflux system protein MdtG CKO_02016 1872664 - 1873038 + | hypothetical protein CKO_02017 1873278 - 1873039 - | hypothetical protein TERM 2427 1873305 - 1873323 + r 87 -10.3 -4.17425 | opp_overlap 1873305 TTCAGTATAAAAAAA TACCGGC AGCAG GCCGGTA TTTTCAGATAATTGT TERM 2428 1873323 - 1873305 - R 100 -10.3 -5.67063 | opp_overlap 1873305 TTCAGTATAAAAAAA TACCGGC AGCAG GCCGGTA TTTTCAGATAATTGT CKO_02018 1875919 - 1873391 - | glucosyltransferase MdoH CKO_02019 1877513 - 1875912 - | glucan biosynthesis protein G TERM 2429 1878218 - 1878206 - g 100 -6.9 -5.72207 | GCCAAATCAAAAAAA GCGCG GAA CGCAC AACGAAGCCATTATT TERM 2430 1878422 - 1878438 + G 71 -10.1 -3.60627 | opp_overlap 1878421 TGGCATTCATCAACC CGGCGCT GAA AGCGCTG TTTACCGTACCGTCA CKO_02020 1877719 - 1878879 + | glucans biosynthesis protein CKO_02021 1880328 - 1878898 - | hypothetical protein TERM 2431 1878942 - 1878972 + g 95 -8.3 -5.08824 | gap 1, opp_overlap 1878945 ACGCCAGTCGCACCA GAACCCGCTTCCAG AATC CTGTG-GCGGGTTC TTTTTTCAGTACCAC CKO_02022 1880854 - 1880321 - | hypothetical protein TERM 2432 1880670 - 1880698 + g 76 -2.9 -5.03145 | overlap 1880672 1880674 ATGACCGCATGTCCT GCCGGGCACTCGC CCT GCTGCTGCCTGAC TTTTTTGCAGGCTTC CKO_02023 1881275 - 1880952 - | hypothetical protein CKO_02024 1881767 - 1881432 - | putative autoagglutination protein TERM 2433 1881785 - 1881800 + r 90 -10.4 -4.33417 | opp_overlap 1881785 CCTCACGAAAAAAAA CAGGGC TTTC GCCCTG TTTATTATGAGTACC TERM 2434 1881800 - 1881785 - R 100 -10.4 -5.86061 | opp_overlap 1881785 CCTCACGAAAAAAAA CAGGGC TTTC GCCCTG TTTATTATGAGTACC CKO_02025 1882316 - 1881825 - | cryptic curlin major subunit CKO_02026 1882803 - 1882321 - | curlin minor subunit CKO_02027 1882829 - 1882954 + | hypothetical protein CKO_02028 1883217 - 1883077 - | hypothetical protein TERM 2435 1883216 - 1883191 - G 83 -5.7 -4.85433 | opp_overlap 1883191 1883204 AGACAAACTCAAAAA TAATTTTAAAT TATG ATTTAAAATCA ATCAGTTATTATAAT TERM 2436 1883806 - 1883782 - g 78 -6.5 -4.59773 | TTTGAGTCGGAAAAA CAACAATATCA AGA CGTTATTGTTG AATACTCCCGACGAC CKO_02029 1883546 - 1884196 + | DNA-binding transcriptional regulator CsgD CKO_02030 1884201 - 1884596 + | curli assembly protein CsgE CKO_02031 1884622 - 1885038 + | curli assembly protein CsgF CKO_02032 1885152 - 1885898 + | hypothetical protein TERM 2437 1885976 - 1885918 - T 82 -11.9 -3.36492 | gap 2, opp_overlap 1885934, overlap 1885919 TCGCCAACCGTAGAA TGCCCGATGGCGCAGACTTATCGGGCCTA CAA CAGGCAGGATAAGTTTGCGCCATCAGG-- ATTGACATCATATGA TERM 2438 1885977 - 1885919 - T 100 -20.4 -2.61681 | opp_overlap 1885934, overlap 1885918 CGCCAACCGTAGAAT GCCCGATGGCGCAGACTTATCGGGCCTA CAA CAGGCAGGATAAGTTTGCGCCATCAGGA TTGACATCATATGAG TERM 2439 1885992 - 1886011 + T 100 -11.4 -5.68438 | opp_overlap 1885989 1885992 ATTGACATCATATGA GCGTGGGG GAAA CCTCACGC TTTTTTATTTGCTGA CKO_02033 1886510 - 1886016 - | hypothetical protein TERM 2440 1886208 - 1886198 - G 76 -5.4 -4.7878 | CAGGCACAAAAGAAA GCAA CAG TTGC TTCGCCTGAACGCAC TERM 2441 1886250 - 1886232 - G 70 -3 -4.82154 | overlap 1886234 AACGCACATCAAAAA CGCGACGA TTC CCGTCATG ACGTAACTGACGATC TERM 2442 1886421 - 1886404 - G 75 -6.9 -4.41548 | GTACAGCCCAGAAAA CCCGCCC AACT GAGCAGG CCAAGGGAAACGGCC TERM 2443 1886597 - 1886584 - R 72 -6.7 -4.30987 | opp_overlap 1886584 1886583, overlap 1886567 1886570 ACGTTGCACAACAAA GTGAC AACG GTCAC ATTTACTCTTCAGCG CKO_02034 1887154 - 1886600 - | hypothetical protein CKO_02035 1887915 - 1887178 - | putative hydrolase TERM 2444 1887623 - 1887606 - G 74 -7.7 -4.07568 | CGTGCGGCGCGAAAA CCGGTTC ATGG AAACCGG CGATAATCACATCCA CKO_02036 1888940 - 1888002 - | hypothetical protein TERM 2445 1889052 - 1889042 - g 90 -4.6 -5.40474 | opp_overlap 1889042 1889042 ATGCTGGCAAAAAAA GCAG TTT CCGC TTATTTAAACTGCAT CKO_02037 1888961 - 1889116 + | hypothetical protein TERM 2446 1889299 - 1889276 - T 76 -5.2 -4.89852 | opp_overlap 1889278, overlap 1889278 CCATATTCAGAAAAA GAGCTCGTAC GAAA GTACGGGCTT TTTTTTCGCATATTG TERM 2447 1889278 - 1889297 + T 100 -10 -5.79526 | opp_overlap 1889276 1889278 ATATTCAGAAAAAGA GCTCGTAC GAAA GTACGGGC TTTTTTTTCGCATAT TERM 2448 1889297 - 1889278 - T 73 -7.8 -4.06785 | opp_overlap 1889278, overlap 1889276 ATATTCAGAAAAAGA GCTCGTAC GAAA GTACGGGC TTTTTTTTCGCATAT TERM 2449 1889409 - 1889397 - T 73 -10.5 -2.94912 | CCGCGAACGCAGAGA GCGGG CTG CCCGC AGGGCGAGCGAAGCG TERM 2450 1889461 - 1889480 + T 100 -10 -5.79526 | opp_overlap 1889459 1889461 CATATTCAAGAAAGA GCTCGTAC GAAA GTACGGGC TTTTTTTTCGCCTAT CKO_02039 1889650 - 1889513 - | hypothetical protein TERM 2451 1889718 - 1889695 - R 100 -12.4 -5.24129 | CCGGCCTACAAAAAA CAAAGCCCGG TTTC CCGGGCTATG AGATCTGACGACGCT CKO_02040 1890522 - 1889734 - | hypothetical protein TERM 2452 1890573 - 1890556 - R 72 -10.5 -2.88999 | opp_overlap 1890555 1890556 TTGGTATACATCACA CGCGCCG TTGG CGGCACG ATTATGCGCACAAAC TERM 2453 1890609 - 1890624 + r 74 -5.4 -4.56597 | overlap 1890599 AGGGTTGGCTTCCTT GTAAGC CATA GCTTGC TTTTTGAAAAGACGC TERM 2454 1891057 - 1891041 - R 100 -10.8 -5.08088 | AATTCTGAATAAAAA GCCCGC GCATG GCGGGC GATGAAAGTAAACGG CKO_02041 1892719 - 1891085 - | hypothetical protein TERM 2455 1891682 - 1891697 + g 74 -8.2 -3.96068 | overlap 1891683 GTTCTGGTTCACCGC TCCGGC CAGT GCCGGG TTATTGTTAAAGTAA CKO_02043 1893029 - 1892751 - | hypothetical protein TERM 2456 1893446 - 1893434 - gH 95 -10.5 -4.5442 | overlap 1893436 TGCGTAACCAGAAAA CGGCC AGC GGCCG CGCCGGGATGGTGCA CKO_02042 1893016 - 1896978 + | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 2457 1897035 - 1897007 - fH 76 -8.1 -4.08692 | gap 1, overlap 1896995 1897008 TAAGGCTTTGGAAAA TGCCCGGTG-GC GCTACG GCTCACCGGGCC TACAAAACACATTTG TERM 2458 1897034 - 1897008 - fH 78 -11.6 -3.04894 | gap 1, overlap 1896995 1897007 AAGGCTTTGGAAAAT GCCCGGTG-GC GCTACG GCTCACCGGGC CTACAAAACACATTT CKO_02044 1897106 - 1897501 + | hypothetical protein CKO_02045 1898136 - 1897498 - | hypothetical protein TERM 2459 1897810 - 1897797 - G 77 -3.7 -5.08824 | TCTCCATGCAAAAAA GCCGG GAAG CCTGC GGATAATCACGGGAG TERM 2460 1898218 - 1898236 + r 74 -10.2 -3.1855 | CAGGACGCTTAGTTT GCGTCGCC TGC GGCGACAC TTCAATCTTACGGAC TERM 2461 1898277 - 1898259 - R 100 -13.1 -5.64274 | TTACGGACAAAAAAA CCGCCGG AGGAA CCGGCGG CGGTGGCATCATAAC TERM 2462 1898341 - 1898363 + r 83 -9.8 -4.14615 | TTAACTTACAGGCTA GCTGTTACGG TTA CCGTGACTGC TTTTGCCCCCTTTTT CKO_02046 1898511 - 1898338 - | hypothetical protein CKO_02047 1898897 - 1899493 + | TrpR binding protein WrbA CKO_02048 1899514 - 1899741 + | hypothetical protein TERM 2463 1899744 - 1899773 + T 78 -12.1 -3.01785 | overlap 1899761 TAAAAATGCCTGACC TTTTCTCCCCCGC CTGC GCGGGGGAGAACC TCTGCTATTTTGCCG CKO_02049 1901019 - 1899778 - | glucose-1-phosphatase/inositol phosphatase TERM 2464 1900408 - 1900422 + g 81 -3.5 -5.27335 | GTCTTTGGCTTCGGT CAGCG AACAC TGCTG TTTTTCTTTGCAGGA TERM 2465 1900579 - 1900595 + g 85 -4.3 -5.19212 | opp_overlap 1900576 CACCGGATTAAACGT TGGGTCC ATC GTGCCCA TTTTTTCCTGATGAT TERM 2466 1901000 - 1900980 - G 81 -6.7 -4.81212 | overlap 1900982 CGGACGACAATAAAA CAGCCCCTG CCA CAGCGGCGG CGAGTATCAATTTTT TERM 2467 1900998 - 1900982 - G 71 -7.9 -4.02119 | overlap 1900980 GACGACAATAAAACA GCCCCTG CCA CAGCGGC GGCGAGTATCAATTT CKO_02050 1901626 - 1901141 - | hypothetical protein CKO_02051 1902136 - 1901651 - | hypothetical protein TERM 2468 1902039 - 1902071 + g 86 -6.8 -5.00196 | gap 1, opp_overlap 1902035 1902036 TGCAGATCAAACGCC GCCAGC-GCCGGGGC CGGT GCCCCGACCGCCAGC TTTTCTTCTTTACAC CKO_02052 1902818 - 1902123 - | hypothetical protein CKO_02053 1903953 - 1902823 - | hypothetical protein TERM 2469 1903698 - 1903670 - G 75 -13.1 -2.57931 | overlap 1903669 1903672 GCCATGCCGTACAAC CACGGACTGGCGC CAT GCACCAGCCCCTG CGGCGCCTGATCGAG TERM 2470 1903782 - 1903772 - G 76 -5.4 -4.74103 | opp_overlap 1903771 1903772, overlap 1903773 1903774 GGCCCAATGTAAAAA TTCG CGC CGAA GGTGCGCAGTTCTTC CKO_02054 1905226 - 1903943 - | hypothetical protein CKO_02055 1906608 - 1905229 - | hypothetical protein TERM 2471 1906710 - 1906655 - R 100 -18.3 -2.62983 | opp_overlap 1906656 1906660 1906703 1906704 1906705, overlap 1906668 1906678 GCGACGGGCATATGA TCGGTCTGACCAACGCGCCAGAAGG GGGAAT CCTCCTGGCGCGTTGGTTAGTCGGT TTTAGTTCAGACCGA TERM 2472 1906656 - 1906709 + r 100 -22.5 -4.4078 | opp_overlap 1906655 1906668 1906678, overlap 1906660 1906703 1906704 1906705 CGACGGGCATATGAT CGGTCTGACCAACGCGCCAGAAGGG GGAA TCCTCCTGGCGCGTTGGTTAGTCGG TTTTAGTTCAGACCG TERM 2473 1906660 - 1906705 + r 100 -24.9 -2.80479 | opp_overlap 1906655 1906668 1906678, overlap 1906656 1906703 1906704 GGGCATATGATCGGT CTGACCAACGCGCCAGAAGGG GGAA TCCTCCTGGCGCGTTGGTTAG TCGGTTTTAGTTCAG TERM 2474 1906697 - 1906668 - R 100 -17.2 -3.14344 | opp_overlap 1906660 1906656, overlap 1906655 1906678 GATCGGTCTGACCAA CGCGCCAGAAGG GGGAAT CCTCCTGGCGCG TTGGTTAGTCGGTTT CKO_02056 1907239 - 1906712 - | hypothetical protein TERM 2475 1906993 - 1907003 + g 78 -2.4 -5.14645 | GGATCCATTCCCCTG CGCC AAA GCCG TTTTTATTGCCTTCT CKO_02057 1909166 - 1907280 - | hypothetical protein TERM 2476 1909259 - 1909245 - H 72 -5.8 -4.40333 | opp_overlap 1909245 GCCAAAGAATACAAA TGATAA TTA TTATCA TTATATCTTTTTGTC TERM 2477 1909317 - 1909303 - g 72 -2.1 -4.91109 | CCTGGATCATAAAAA TGTCA GCAGA CGACA AGTTATGTAAACTTA CKO_02058 1909278 - 1909442 + | hypothetical protein TERM 2478 1909485 - 1909444 - T 100 -13.8 -4.329 | opp_overlap 1909447, overlap 1909434 TAACAGAGGAATAAA TCCCCCTGCCGACAGTGA TGTTAT TCATTGTCGGCAGGCAGA AATAAAACGCGTTAT CKO_02059 1910277 - 1909516 - | Na(+)-translocating NADH-quinone reductase subunit C TERM 2479 1910508 - 1910491 - R 100 -12.7 -5.03145 | CAATGGGTTAAAAAA TGCCGGG TTTC CCCGGCA CGCTATCAAAACATG CKO_02060 1911020 - 1910514 - | hypothetical protein CKO_02061 1911633 - 1911010 - | hypothetical protein CKO_02062 1913516 - 1911630 - | hypothetical protein TERM 2480 1911744 - 1911761 + gr 74 -2.5 -5.0133 | opp_overlap 1911741, overlap 1911741 1911740 1911757 AATCTGGTTAAACGG CACAGCC ACCT GGCCGCG TTTTTTCAAAAAGTC CKO_02063 1913568 - 1913419 - | hypothetical protein CKO_02064 1913930 - 1913565 - | hypothetical protein TERM 2481 1913665 - 1913637 - G 76 -9.5 -3.90744 | TCGCGGTGGAAAGAA TGGCAGGCGTACG GCG CGTACGGGCGCCA GCAGGGACAACAACA CKO_02065 1913988 - 1914155 + | hypothetical protein CKO_02066 1914160 - 1915080 + | curved DNA-binding protein CbpA CKO_02067 1915080 - 1915385 + | chaperone-modulator protein CbpM TERM 2482 1915393 - 1915423 + T 100 -9.6 -4.82901 | opp_overlap 1915395 1915396, overlap 1915396 ACCCATAAAATAATA AACGGGGGTTGGCA CAC TGCCCACCCCCTTA TTTTTATCACCGCGA TERM 2483 1915421 - 1915395 - T 100 -12.2 -4.72617 | opp_overlap 1915393 1915396, overlap 1915396 CCATAAAATAATAAA CGGGGGTTGGCA CAC TGCCCACCCCCT TATTTTTATCACCGC TERM 2484 1915396 - 1915420 + T 100 -15.7 -4.52873 | opp_overlap 1915395 1915396, overlap 1915393 CATAAAATAATAAAC GGGGGTTGGCA CAC TGCCCACCCCC TTATTTTTATCACCG TERM 2485 1915420 - 1915396 - T 100 -15.7 -3.41944 | opp_overlap 1915396 1915393, overlap 1915395 CATAAAATAATAAAC GGGGGTTGGCA CAC TGCCCACCCCC TTATTTTTATCACCG CKO_02068 1915512 - 1915372 - | hypothetical protein TERM 2486 1915479 - 1915504 + g 83 -8.3 -4.39407 | gap 1, opp_overlap 1915473 CACAGGGAAGCTGCT GGCCGCAACGGT TAA ACC-TTGCAGCC TTTTCCATTCTTTCG CKO_02069 1915866 - 1915525 - | hypothetical protein CKO_02070 1916259 - 1915954 - | hypothetical protein CKO_02072 1916595 - 1916416 - | hypothetical protein TERM 2487 1917469 - 1917427 - gR 77 -7 -4.4009 | gap 1, opp_overlap 1917427 1917425 1917428, overlap 1917428 1917429 CGCGAGGCGATAAAA CCGTTATGGCGACAGGCCG CGCTCT CGGGC-GTCGCCATGACAA TATTGATACTCGGGA TERM 2488 1917510 - 1917550 + Gr 71 -7.7 -3.93369 | gap 3, overlap 1917500 CGCTATCGCGATTGC GATGTATGCCGGCGCCTGGG ATAG CCC-GGTGCCGG-A-GCATC TTTACTTCCGCTTAA CKO_02071 1916488 - 1917594 + | hypothetical protein CKO_02073 1918404 - 1917628 - | hypothetical protein TERM 2489 1917962 - 1917982 + g 73 -10.4 -3.44848 | gap 1, opp_overlap 1917940, overlap 1917970 GGCTCCGGCAGCCAG GCGCG-GGC CAGC GCCACGCGC TGTTTCATCCCGCCG TERM 2490 1917970 - 1917984 + g 79 -11.4 -3.72576 | overlap 1917962 CAGCCAGGCGCGGGC CAGCGC CAC GCGCTG TTTCATCCCGCCGGA CKO_02074 1919174 - 1918404 - | hypothetical protein TERM 2491 1918944 - 1918911 - G 78 -11.7 -3.29829 | overlap 1918912 CAGACCTTCCGACAA CCCCATCAGCAACCC CAGG GGGATGCCGATGAGA ATTGCCACAGAAAAA TERM 2492 1918943 - 1918912 - G 75 -13 -2.57683 | overlap 1918911 AGACCTTCCGACAAC CCCATCAGCAACCC CAGG GGGATGCCGATGAG AATTGCCACAGAAAA TERM 2493 1918970 - 1918960 - G 72 -2.4 -4.9725 | ATTGCCACAGAAAAA GCGC TTA GGGC CCGGGCCAGGCTGAC CKO_02075 1920178 - 1919171 - | hypothetical protein CKO_02076 1920926 - 1920207 - | hypothetical protein TERM 2494 1920765 - 1920731 - G 71 -10.7 -3.16492 | gap 1, opp_overlap 1920728, overlap 1920729 CCACACCGAGCAAGA GCT-GCGGCAACGGCG AAGG CCCCGTTCCCGCCAGC GCCTGTTGGCGATCC CKO_02077 1921936 - 1920923 - | D-cysteine desulfhydrase CKO_02079 1922187 - 1922056 - | hypothetical protein TERM 2495 1922108 - 1922087 - Gg 74 -2.3 -5.06052 | GGAAAAAAGATAAAA CAAAAAACG ATCG CGTTATTTA TTCGCCAGCATTCAT CKO_02078 1922002 - 1922130 + | hypothetical protein CKO_02080 1923155 - 1922190 - | hypothetical protein TERM 2496 1923069 - 1923092 + g 71 -5.9 -4.2679 | ATAGCGAGGCAACAG GGTCACGCC ATGCGA GTCGTGGCC TTTTAATGAGGATTC TERM 2497 1923483 - 1923469 - g 74 -2.8 -4.90302 | opp_overlap 1923478 1923479 TATGAATAAAAGAAA CAGG GTATTTG CCTG GACGCTGGCGTTTTC TERM 2498 1924258 - 1924246 - g 74 -3.3 -4.8543 | TAACCGTGACAAAAA TGCGG CTG CCGAA ACGTATATTCGCGTC CKO_02081 1923455 - 1924462 + | hypothetical protein CKO_02082 1924484 - 1925326 + | hypothetical protein CKO_02083 1925298 - 1926164 + | hypothetical protein CKO_02084 1927326 - 1926220 - | hypothetical protein CKO_02085 1927998 - 1927420 - | hypothetical protein TERM 2499 1928155 - 1928131 - RH 78 -12.8 -2.5194 | overlap 1928130 CAATGAGTCATGAAG TCGGCGGACG GTTCA CGTCCGCCGG AAGGCTATCAAAACG CKO_02087 1930217 - 1928163 - | hypothetical protein TERM 2500 1928468 - 1928437 - GH 72 -10.8 -2.78384 | gap 1, overlap 1928446 TGGCTGCTGACCAGA CGCAGCAGACCGGTG CTG CTCCAGTC-GCCGCG TTCCCATGTCAGACC TERM 2501 1929870 - 1929889 + gH 79 -10.7 -3.62591 | opp_overlap 1929853, overlap 1929885 CGGCGCATCCATACG TGCCGGG CAGGCT CCCGGCA TTTCGCCGTTATCGG TERM 2502 1930091 - 1930075 - GH 73 -10.1 -3.32963 | ATTTCCAGCGGAGAA GCGACCG GCG CGGTCAC AATCATTACCGAATC CKO_02088 1930683 - 1930303 - | hypothetical protein CKO_02086 1930206 - 1930370 + | hypothetical protein CKO_02089 1932116 - 1930869 - | hypothetical protein CKO_02090 1934115 - 1932106 - | hypothetical protein TERM 2503 1932180 - 1932192 + g 71 -10.5 -3.29591 | overlap 1932175 TCAACGTGGACGCCA GGCGC AAC GCGCC TTCCATTTGCGTCAT TERM 2504 1933762 - 1933776 + g 74 -11.4 -3.31144 | opp_overlap 1933761 GTCCTGCAAAATCAC CGCCAG CTG CTGGCG TTCTGCGGGTGACAG CKO_02091 1935383 - 1934112 - | hypothetical protein TERM 2505 1934580 - 1934563 - GR 76 -5.5 -4.70772 | gap 1, opp_overlap 1934574, overlap 1934564 AGATAGCGAATAAAA CGCC-GCG CTT CGCTGGCA TGCTGGCTGTTTTTG TERM 2506 1934693 - 1934716 + gr 100 -5.1 -5.54907 | opp_overlap 1934693, overlap 1934694 CATAGTTATCAATCA CCGGGCCGG CCACGC CCAGCCCGC TTTTTATTTTATCCG TERM 2507 1934694 - 1934715 + gr 74 -8.6 -3.91317 | opp_overlap 1934693, overlap 1934693 ATAGTTATCAATCAC CGGGCCGG CCACGC CCAGCCCG CTTTTTATTTTATCC TERM 2508 1935042 - 1935065 + gr 74 -3 -4.89233 | gap 1, overlap 1935045 ATGTTGACTGACTGA CGGCGCACCGT TGA ACGGCGC-CAG TTTTTGATGTTCCTG CKO_02092 1935588 - 1935337 - | hypothetical protein TERM 2509 1936134 - 1936151 + G 75 -6.9 -4.45083 | overlap 1936131 1936137 CGGCCTGTTTCAGGG GATGGGC GTCG GCCCCTC TTTTATCACTATCGC CKO_02093 1935820 - 1937130 + | hypothetical protein TERM 2510 1937180 - 1937155 - T 100 -13.3 -5.10933 | opp_overlap 1937149 CCAGGGAAAAGAAAA CCCCGGATAGC TTTT GTTATCCGGGG TTCGGCATGATCTGA TERM 2511 1937230 - 1937259 + T 100 -15.1 -3.83026 | opp_overlap 1937230 1937234, overlap 1937234 TTTTTGACACAAAAA CAAAGGGGCTACC TTTC GGTAACCCCTTTG TTTAATCTGGCGGAA TERM 2512 1937259 - 1937230 - T 100 -17.3 -4.96848 | opp_overlap 1937230 1937234, overlap 1937234 TTTTTGACACAAAAA CAAAGGGGCTACC TTTC GGTAACCCCTTTG TTTAATCTGGCGGAA TERM 2513 1937255 - 1937234 - T 100 -12.3 -5.01422 | opp_overlap 1937234 1937230, overlap 1937230 TGACACAAAAACAAA GGGGCTACC TTTC GGTAACCCC TTTGTTTAATCTGGC TERM 2514 1937234 - 1937255 + T 90 -10.1 -4.53602 | opp_overlap 1937230 1937234, overlap 1937230 TGACACAAAAACAAA GGGGCTACC TTTC GGTAACCCC TTTGTTTAATCTGGC TERM 2515 1937487 - 1937518 + T 88 -8.6 -4.78237 | opp_overlap 1937487, overlap 1937482 ATTCAGCATAAAAAA GAGGCCCGGCGGCA AATG TTCCGTTGCGCCTC TTTTATTATGCGCTC TERM 2516 1937518 - 1937487 - T 83 -4.2 -5.31877 | opp_overlap 1937487 1937482 ATTCAGCATAAAAAA GAGGCCCGGCGGCA AATG TTCCGTTGCGCCTC TTTTATTATGCGCTC CKO_02095 1937635 - 1937474 - | hypothetical protein TERM 2517 1937651 - 1937681 + H 75 -9.9 -3.57239 | opp_overlap 1937656, overlap 1937656 ATGCGTAAAGATGGG TAAAACCGCTG TGTGATTAT CAGCGGTTTTA TTATCCTCTTTCGCT TERM 2518 1937656 - 1937676 + H 78 -5.4 -4.83722 | opp_overlap 1937656, overlap 1937651 TAAAGATGGGTAAAA CCGCTG TGTGATTAT CAGCGG TTTTATTATCCTCTT CKO_02096 1937725 - 1938384 + | hypothetical protein TERM 2519 1938403 - 1938428 + F 100 -12.5 -5.15634 | opp_overlap 1938395 1938403 1938406, overlap 1938407 ATAAGAACGCATTAA CCAGGCCCCGC TTAT GCGGGGCTTTG TTTTTTGGTAAACTG TERM 2520 1938428 - 1938403 - f 74 -10.3 -3.2557 | opp_overlap 1938403 1938407, overlap 1938395 1938406 ATAAGAACGCATTAA CCAGGCCCCGC TTAT GCGGGGCTTTG TTTTTTGGTAAACTG TERM 2521 1938425 - 1938406 - f 72 -10.6 -2.80338 | opp_overlap 1938403 1938407, overlap 1938395 1938403 AGAACGCATTAACCA GGCCCCGC TTAT GCGGGGCT TTGTTTTTTGGTAAA TERM 2522 1938407 - 1938424 + F 100 -14.1 -5.0917 | opp_overlap 1938395 1938406 1938403, overlap 1938403 GAACGCATTAACCAG GCCCCGC TTAT GCGGGGC TTTGTTTTTTGGTAA TERM 2523 1938740 - 1938709 - g 84 -5.8 -5.06414 | opp_overlap 1938714 TTTGGCGAAGAAAAA GGCAACAGCCGCTA CCTG TATCGCCTGTTTCC GAAAGGCCCGGCAAA CKO_02097 1938475 - 1938804 + | sulfurtransferase TusE CKO_02098 1939082 - 1938801 - | hypothetical protein CKO_02099 1939264 - 1940367 + | hypothetical protein CKO_02100 1940425 - 1940742 + | hypothetical protein TERM 2524 1940782 - 1940755 - T 90 -10.6 -4.28774 | gap 1, opp_overlap 1940747 1940778, overlap 1940756 TGATTCAACGTAAAA TGCCCGAT-AGCG CGA CGCTTATCGGGCT TACACGCTATGTCTG TERM 2525 1940781 - 1940756 - T 86 -14.1 -3.16783 | gap 1, opp_overlap 1940747 1940778, overlap 1940755 GATTCAACGTAAAAT GCCCGAT-AGCG CGA CGCTTATCGGGC TTACACGCTATGTCT CKO_02101 1941219 - 1940803 - | hypothetical protein TERM 2526 1941551 - 1941504 - gR 100 -11.4 -5.07567 | gap 1, overlap 1941505 TTAGACGGCAAAAAA GTC-TCCAGTTCATTGCTGCGCG GCG CGGACAGCATCGAACTGGACAAC GGCCCGCATCAGCTT TERM 2527 1941549 - 1941505 - gR 90 -12.9 -3.63817 | overlap 1941504 TAGACGGCAAAAAAG TCTCCAGTTCATTGCTGCGCG GCG CGGACAGCATCGAACTGGACA ACGGCCCGCATCAGC CKO_02103 1942123 - 1941950 - | hypothetical protein CKO_02102 1941390 - 1942052 + | hypothetical protein TERM 2528 1942371 - 1942396 + G 75 -12.5 -2.69151 | overlap 1942388 GCTGAGCGGCCCGAT GGGCGGCGATC AGCA GGTCGGCGCCC TGATCTCTGAAGGGA CKO_02104 1942168 - 1942626 + | methylglyoxal synthase TERM 2529 1942634 - 1942655 + T 75 -11.5 -3.06737 | overlap 1942637 1942650 TGAAATAACGCTCCC ACAGGCGGC ACAA GCCGCCTGC TCTTAAGGCTTCCTC TERM 2530 1942637 - 1942652 + T 76 -11.8 -2.74999 | overlap 1942634 1942650 AATAACGCTCCCACA GGCGGC ACAA GCCGCC TGCTCTTAAGGCTTC CKO_02105 1944712 - 1942658 - | DNA helicase IV TERM 2531 1942964 - 1942975 + gT 83 -7.2 -4.58395 | overlap 1942962 TTGCAGCTTAGGCCA GCGG GTCG CCGC TTTTTCAAGACTGGC TERM 2532 1943194 - 1943172 - GT 81 -8.5 -4.36914 | gap 1, overlap 1943175 TTTTGTTGGATAAAA CG-ATTGGCG ATTT CGCCAATGCG CCCGTTAAAACGGTA CKO_02106 1944809 - 1944630 - | hypothetical protein CKO_02107 1944836 - 1945282 + | hypothetical protein TERM 2533 1946715 - 1946725 + G 85 -2.4 -5.46698 | overlap 1946703 TACTGCTGGTTATCA CCGG CGT CCTG TTTTTTGCTTTTCGA CKO_02108 1945292 - 1947448 + | hypothetical protein CKO_02109 1948040 - 1947417 - | hypothetical protein TERM 2534 1947495 - 1947470 - G 100 -16.1 -3.18264 | opp_overlap 1947464 1947477 GCGCCCACTCAGCAA GCTCCTGGCGG CGTA CCGCCGGGAGC GCCGCTTCATGTACG TERM 2535 1947477 - 1947500 + g 74 -11.6 -3.25823 | opp_overlap 1947470, overlap 1947464 CTCAGCAAGCTCCTG GCGGCGTACC GCCG GGAGCGCCGC TTCATGTACGCCAGC TERM 2536 1947697 - 1947716 + g 84 -9.4 -4.3739 | opp_overlap 1947691 TTCAATCGACGTTGT GAAAAACG GGTA CGTTTTTC TTTTATGGCAGCATC CKO_02110 1948257 - 1948766 + | SOS cell division inhibitor CKO_02111 1949098 - 1950168 + | outer membrane protein A TERM 2537 1950188 - 1950202 + T 100 -12.8 -5.58454 | opp_overlap 1950188 CCGTCTAATAAAAAA CCCCGC GCT GCGGGG TTTTTTTCGTCTGAA TERM 2538 1950202 - 1950188 - T 100 -12.8 -5.4505 | opp_overlap 1950188 CCGTCTAATAAAAAA CCCCGC GCT GCGGGG TTTTTTTCGTCTGAA CKO_02112 1950695 - 1950243 - | hypothetical protein CKO_02113 1950881 - 1952641 + | hypothetical protein CKO_02114 1952710 - 1953228 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 2539 1953353 - 1953323 - f 84 -8.2 -4.56775 | opp_overlap 1953326, overlap 1953325 1953330 ACCTGCCTGTAAAAA GGCGAAACCTCCGC ACT GCGGAGGTTTCTTT TTTCTAAAGAGACAG TERM 2540 1953351 - 1953325 - f 90 -15.2 -2.60032 | opp_overlap 1953326, overlap 1953323 1953330 CTGCCTGTAAAAAGG CGAAACCTCCGC ACT GCGGAGGTTTCT TTTTTCTAAAGAGAC TERM 2541 1953326 - 1953350 + F 100 -18.7 -5.24129 | opp_overlap 1953325 1953323 1953330 TGCCTGTAAAAAGGC GAAACCTCCGC ACT GCGGAGGTTTC TTTTTTCTAAAGAGA TERM 2542 1953346 - 1953330 - f 100 -13.7 -3.8046 | opp_overlap 1953326, overlap 1953325 1953323 TGTAAAAAGGCGAAA CCTCCGC ACT GCGGAGG TTTCTTTTTTCTAAA TERM 2543 1953605 - 1953579 - g 76 -3 -5.07652 | overlap 1953581 1953593 TGGTGGAAAAGAAAA CAGTGATTAC GAAATGT GCAATCACAG TAAACGAATACCGCG TERM 2544 1953772 - 1953746 - g 100 -11.5 -6.23317 | opp_overlap 1953746 AGAAAAACAAAAAAA CCGCCCCCGGC GACGT GCCGAAAGCGG TTAAATTTACAATAT CKO_02115 1953497 - 1953793 + | hypothetical protein CKO_02116 1954358 - 1953795 - | hypothetical protein CKO_02117 1956013 - 1954355 - | paraquat-inducible protein B TERM 2545 1955941 - 1955951 + g 78 -2.4 -5.1925 | TAGGGAATATCCACA CGGG AGA CCAG TTTTTTACCTTCTGC CKO_02118 1957202 - 1956000 - | hypothetical protein CKO_02119 1959160 - 1957268 - | ABC transporter ATPase component TERM 2546 1957403 - 1957391 - G 95 -10.5 -4.56597 | overlap 1957393 CGGTTGGCTGAAAAA GGCGG CAT CCGCC ACCTGCGCCTGCAAC TERM 2547 1957438 - 1957460 + g 76 -12 -3.09671 | CCAGTTTGGCCTCCA GCTCTTCCAG TAA CTGGGGGAGC TGTTCCAGTTCGCGT TERM 2548 1958066 - 1958086 + g 71 -9.7 -3.5393 | ACGTCCGCTGTCTGC CTGAAGCTG GCC CAGCATCAG TTTCAGCAACGTGGT TERM 2549 1958818 - 1958828 + g 80 -5.4 -4.87665 | CCTGCACCCGCGCCA TCTC ATT GAGA TTTTTATCGCTGGGG CKO_02120 1961296 - 1959188 - | 23S rRNA m(2)G2445 methyltransferase TERM 2550 1960130 - 1960149 + g 74 -2.1 -5.00884 | gap 1, overlap 1960140 1960141 ATCTTCCGCCACCGT CG-CAGGC TTGCT GTCTGGCG TTTTTTCCGCCAGAT TERM 2551 1960182 - 1960196 + g 70 -3.4 -4.81851 | overlap 1960184 1960193 TAGTTTTTCTGCACG CAGTCC AGC GGGCCG TTTTTGGCTTTGAAT TERM 2552 1962119 - 1962107 - g 93 -9.1 -4.72486 | overlap 1962098 1962109 1962110 GAGAAAGGGCAAAAA CACCC AAC GGGTG AGCCGCTGGCAACCT TERM 2553 1962501 - 1962485 - g 74 -2.2 -5.00884 | AGTCCGCTGAAAAAA TCAGCG ATTAA CGATGA CGGAACGATTCTTAG CKO_02121 1961492 - 1962559 + | hypothetical protein CKO_02122 1963119 - 1962556 - | hypothetical protein TERM 2554 1963247 - 1963218 - R 100 -11.5 -4.73864 | opp_overlap 1963218 1963221 TGAAGGAATATAAAA CAACCAGGGCC GGAAATAA AGCCCTGGTTG TCTGATAATGAGAGA TERM 2555 1963218 - 1963247 + r 72 -10.8 -2.82516 | opp_overlap 1963218, overlap 1963221 TGAAGGAATATAAAA CAACCAGGGC CGGAAATAAA GCCCTGGTTG TCTGATAATGAGAGA CKO_02123 1964279 - 1963269 - | dihydroorotate dehydrogenase 2 CKO_02124 1964523 - 1965098 + | NAD(P)H-dependent FMN reductase CKO_02125 1965091 - 1966065 + | hypothetical protein CKO_02126 1966062 - 1967207 + | alkanesulfonate monooxygenase CKO_02127 1967219 - 1968010 + | alkanesulfonate transporter permease subunit CKO_02128 1968007 - 1968774 + | aliphatic sulfonates transport ATP-binding subunit CKO_02129 1971459 - 1968847 - | hypothetical protein TERM 2556 1968917 - 1968929 + g 85 -4.7 -5.14965 | overlap 1968918 CTTTTCAGTTGCTCC AGCGC GGC GCGCA TTTTTTCCTGGCGCT CKO_02130 1971605 - 1971456 - | hypothetical protein CKO_02131 1972681 - 1971674 - | hypothetical protein TERM 2557 1972188 - 1972210 + g 77 -4.8 -4.89063 | ACATTAAGAAATTCT GACGACCTCA TTA TGATCTCGTC TTTATTTTTAGGTGA CKO_02132 1972847 - 1972692 - | hypothetical protein CKO_02133 1972996 - 1972847 - | hypothetical protein CKO_02134 1973367 - 1974569 + | nicotinate phosphoribosyltransferase TERM 2558 1975191 - 1975233 + G 93 -10.6 -4.41348 | opp_overlap 1975185, overlap 1975193 CCAATATGATTGGCG CAGTCGC-GCGCGTGCGCCA TACGC TGGCGCAAGCGCTGC-ACCG TTTCTTTGACGAGCA TERM 2559 1975193 - 1975231 + G 71 -11.8 -2.54371 | opp_overlap 1975185, overlap 1975191 AATATGATTGGCGCA GTCGC-GCGCGTGCGCCA TACGC TGGCGCAAGCGCTGC-AC CGTTTCTTTGACGAG CKO_02135 1974707 - 1976185 + | asparaginyl-tRNA synthetase TERM 2560 1976194 - 1976210 + F 100 -13.7 -4.60797 | opp_overlap 1976194 TTTCTGATTTTAGAA GGCCAGC TTT GCTGGCC TTTTCTCTCTCAGAA TERM 2561 1976210 - 1976194 - f 90 -13.7 -3.32844 | opp_overlap 1976194 TTTCTGATTTTAGAA GGCCAGC TTT GCTGGCC TTTTCTCTCTCAGAA CKO_02136 1976516 - 1976710 + | hypothetical protein CKO_02138 1976840 - 1976715 - | hypothetical protein CKO_02137 1976780 - 1977868 + | outer membrane protein F TERM 2562 1977916 - 1977901 - TfRH 100 -9 -5.07107 | opp_overlap 1977901 1977894 TAAATGCCTAAAAAA CAGGAC TTCG GTCCTG TTTTTTTATGTCTGC TERM 2563 1977901 - 1977916 + TFrH 100 -9 -5.76633 | opp_overlap 1977901, overlap 1977894 TAAATGCCTAAAAAA CAGGAC TTCG GTCCTG TTTTTTTATGTCTGC CKO_02140 1978066 - 1977893 - | hypothetical protein TERM 2564 1978197 - 1978180 - gR 84 -9.1 -4.26589 | opp_overlap 1978171, overlap 1978173 ATGAGACAGGCAAAA CGCCGGT GTTA ACCAGCG TTAAAAAAGCCGAGC TERM 2565 1978370 - 1978332 - gR 74 -7.2 -4.08144 | overlap 1978312 1978309 1978308 1978333 1978351 CTGATCAATGACAAA CGCGCTCGCACCGCGCAA ACG CCAGGCGGTACTGGCGCG CTCCGTGTTGCCGCG TERM 2566 1978640 - 1978650 + Gr 71 -6.8 -4.03234 | opp_overlap 1978639 1978640 GGAACAGTGGCAAAC GCTG GCT CAGC TTTCTGTCGAAAAAG TERM 2567 1979228 - 1979204 - gR 77 -10.7 -3.30619 | opp_overlap 1979206, overlap 1979206 AATGACGCCGGATAA CATGGCTCCGC TGT GCGAAGCCATT GTCGCCGTACTGTAA TERM 2568 1979226 - 1979206 - gR 87 -13.3 -3.21924 | opp_overlap 1979206, overlap 1979204 TGACGCCGGATAACA TGGCTCCGC TGT GCGAAGCCA TTGTCGCCGTACTGT TERM 2569 1979206 - 1979226 + Gr 79 -11.1 -3.3197 | opp_overlap 1979206 1979204 TGACGCCGGATAACA TGGCTCCGC TGT GCGAAGCCA TTGTCGCCGTACTGT CKO_02139 1978053 - 1979243 + | aromatic amino acid aminotransferase TERM 2570 1979272 - 1979252 - TR 84 -14 -2.86343 | opp_overlap 1979270 1979271 ACTGTAAGTATCATA GCGCCAGG TAGTG CCTGGCGC TTACCCGGTCTACAG CKO_02141 1979964 - 1979317 - | hypothetical protein CKO_02142 1980541 - 1979993 - | hypothetical protein CKO_02143 1982584 - 1980722 - | hypothetical protein TERM 2571 1981491 - 1981476 - G 73 -9 -3.87149 | GGCAGTAAACGCAAA CGCTGA ATAT TCAGCG CCAGCACCCCCGCAC TERM 2572 1982703 - 1982678 - R 78 -12.7 -2.71483 | opp_overlap 1982675, overlap 1982658 1982688 ATACCTTCTGAAGTA TGACGAGCAAG CCTG CTTACTCGTCA GGCTTACCTTCAGTA TERM 2573 1982747 - 1982734 - R 70 -2.4 -4.96106 | opp_overlap 1982734, overlap 1982728 TATAAACATCAAAAA GGTT TTGCCT AACC TAATGTAAAGAAGTT TERM 2574 1982773 - 1982790 + r 71 -7 -4.16251 | opp_overlap 1982773 AAGTTTAAAGAAAAA GCACCT GGTGTA AGGTGC TTTTCAGACTTCTGT TERM 2575 1982790 - 1982773 - R 90 -7 -5.29846 | opp_overlap 1982773 AAGTTTAAAGAAAAA GCACCT GGTGTA AGGTGC TTTTCAGACTTCTGT TERM 2576 1982846 - 1982829 - R 100 -8.4 -5.1861 | opp_overlap 1982829 TTTATGATGAAAAAA GACGGC GCGAAG GCCGTC TTCATCTTACTTACC CKO_02144 1987326 - 1982857 - | cell division protein MukB TERM 2577 1985910 - 1985933 + g 71 -4.4 -4.66537 | opp_overlap 1985909, overlap 1985913 CCTGTTCAAACTGAC TGTGCGCGGT TTGC GCCACGCTCA TTTTCTGTTCCAGCG TERM 2578 1986053 - 1986042 - G 71 -7.2 -4.02334 | opp_overlap 1986051, overlap 1986038 CAGGCAGATGACAAA GCGC TTTG GCGC GGTCGAGCGCCTGGA TERM 2579 1986159 - 1986180 + g 71 -10.1 -3.55453 | gap 1, overlap 1986156 GTTCATCCACTTCCA GCTCG-GCGG CTT CCGCACGGGC TTCGTTCTCTTCCTG CKO_02145 1988003 - 1987326 - | condesin subunit E CKO_02146 1989333 - 1988011 - | condesin subunit F CKO_02147 1990116 - 1989337 - | putative metallothionein SmtA TERM 2580 1989573 - 1989586 + g 72 -2.3 -4.87318 | overlap 1989573 TACGTGGATAGTCTG GCGAA AGCG TACGC TTTTTGCGTTTTGGC CKO_02148 1990143 - 1990349 + | hypothetical protein CKO_02149 1990252 - 1991031 + | hypothetical protein CKO_02150 1991901 - 1991008 - | hypothetical protein CKO_02151 1992084 - 1991959 - | hypothetical protein TERM 2581 1992045 - 1992015 - GR 79 -12.7 -2.93361 | gap 1, overlap 1992004 1992018 AAAATCGTAACGATA CGACACTCCTCCCA TTTG TGAGAGGAGTG-CG ATAGCGGATATCAGC TERM 2582 1992043 - 1992018 - GR 83 -14.1 -2.70143 | overlap 1992015 ATCGTAACGATACGA CACTCCTCCCA TTTG TGAGAGGAGTG CGATAGCGGATATCA CKO_02152 1992802 - 1992056 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 2583 1992458 - 1992442 - GR 87 -13.7 -3.25823 | opp_overlap 1992442 GCGTTGCCATACCAA CCTGGCG CTG CGCCAGG TTTTCCGCCACCTGA TERM 2584 1992442 - 1992458 + gr 100 -13.7 -4.08216 | opp_overlap 1992442 GCGTTGCCATACCAA CCTGGCG CTG CGCCAGG TTTTCCGCCACCTGA CKO_02153 1992981 - 1992799 - | hypothetical protein CKO_02154 1994265 - 1993033 - | hypothetical protein TERM 2585 1993908 - 1993920 + g 71 -7.7 -4.05446 | CATCGGCATGTTCCT GCATC CAC GATGC TTTGTACTTCCAGCC CKO_02155 1995286 - 1994309 - | tetraacyldisaccharide 4'-kinase TERM 2586 1994880 - 1994890 + g 74 -6.8 -4.29738 | TGTACATCGTGACGC GCGA GAA TCGC TTTTACTGCGTCTGA TERM 2587 1994907 - 1994941 + g 78 -12 -3.18912 | opp_overlap 1994911, overlap 1994911 TTTACTGCGTCTGAG CGAACCGGCGAGACAG CAA CAGGTGCGCCGGTTCG TTGATAGATCAGTAC TERM 2588 1995240 - 1995199 - G 83 -12.9 -3.25072 | GGTAGCACAAGCGAA TCCCCCCACTCACCAGGCC ATAC AGCCAGGAGAGTGGGAGCA AAAGACGCCACAGGG CKO_02156 1997031 - 1995283 - | lipid transporter ATP-binding/permease protein CKO_02157 1999332 - 1997068 - | hypothetical protein TERM 2589 1998912 - 1998930 + g 71 -4.4 -4.58773 | overlap 1998914 CCCCCTCATTAAGCT GACCATGC ACG GCACGGAC TTTTAGTTTCATCGC CKO_02159 1999807 - 1999397 - | hypothetical protein TERM 2590 1999603 - 1999622 + Gg 82 -11.4 -3.86897 | opp_overlap 1999550 1999602 1999601 GTAGGCCTGATAAGC GTAGCGCC ATCA GGCGCTGC TTTATGCCGGATGGC TERM 2591 1999699 - 1999718 + Gg 82 -11.4 -3.87075 | opp_overlap 1999697 1999698 GTGGGCCTGATAAGC GTAGCGCC ATCA GGCGCTGC TTTGTGCCGGATGAT CKO_02158 1999365 - 1999772 + | hypothetical protein TERM 2592 1999800 - 1999770 - GT 100 -14.2 -3.97368 | opp_overlap 1999778, overlap 1999771 1999778 GTCGGAATGCAGAAA TGAAAAAAGCACCT TTC AGGTGCTTTTTTCT GGATCAAGTTTTTCG TERM 2593 1999799 - 1999771 - GT 100 -17.7 -2.981 | opp_overlap 1999778, overlap 1999770 1999778 TCGGAATGCAGAAAT GAAAAAAGCACCT TTC AGGTGCTTTTTTC TGGATCAAGTTTTTC TERM 2594 1999778 - 1999792 + gT 100 -10 -5.28176 | opp_overlap 1999771 1999770 1999778 GCAGAAATGAAAAAA GCACCT TTC AGGTGC TTTTTTCTGGATCAA TERM 2595 1999792 - 1999778 - GT 100 -10 -5.42514 | opp_overlap 1999778, overlap 1999771 1999770 GCAGAAATGAAAAAA GCACCT TTC AGGTGC TTTTTTCTGGATCAA CKO_02160 2000107 - 1999823 - | integration host factor subunit beta TERM 2596 2000156 - 2000186 + rH 85 -12.7 -3.33696 | gap 1, opp_overlap 2000162, overlap 2000158 2000162 TGCTGTTGTTGCATT G-ATTAAGGGCGGC CGTA GCCGCCCTTAGTGC TTGATTACAGGACGA TERM 2597 2000158 - 2000183 + rH 93 -15.5 -2.84098 | opp_overlap 2000162, overlap 2000156 2000162 CTGTTGTTGCATTGA TTAAGGGCGGC CGTA GCCGCCCTTAG TGCTTGATTACAGGA TERM 2598 2000162 - 2000179 + rH 90 -14.1 -3.30554 | opp_overlap 2000162, overlap 2000158 2000156 TGTTGCATTGATTAA GGGCGGC CGTA GCCGCCC TTAGTGCTTGATTAC TERM 2599 2000179 - 2000162 - RH 86 -14.1 -3.18264 | opp_overlap 2000162 2000158 2000156 TGTTGCATTGATTAA GGGCGGC CGTA GCCGCCC TTAGTGCTTGATTAC CKO_02162 2001938 - 2000265 - | 30S ribosomal protein S1 TERM 2600 2001764 - 2001774 + Gg 87 -8.2 -4.63527 | overlap 2001757 CCTGGATTTCCAGTT CGCC CTG GGCG TTTTTGAACTGCTCA CKO_02161 2000676 - 2001902 + | hypothetical protein CKO_02163 2002735 - 2002052 - | cytidylate kinase TERM 2601 2002409 - 2002399 - G 77 -8.2 -4.07568 | opp_overlap 2002404, overlap 2002400 GCTGGCGGCGCAAAA GCGC TTC GCGC ACGCGCGGGAACGCA CKO_02164 2004200 - 2002917 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2602 2003486 - 2003464 - G 74 -7.6 -4.15884 | overlap 2003461 GCAAGGAAATAAGAA GCGGATGACG CGT CGCCTTCCAC CAGATATTGACCCGG TERM 2603 2003753 - 2003734 - G 70 -7 -4.08216 | opp_overlap 2003733 TGACCGCCGCTAAAA CCGCCGCG CAGA CGCAGAGG CGGATAGTTTTCCTG TERM 2604 2004252 - 2004232 - R 100 -12.6 -5.48623 | AAACAGAAATAAAAA CCCCACAG GCTGG CTGTGGGG ATGAAAAAAGAAAAC CKO_02165 2005359 - 2004271 - | phosphoserine aminotransferase TERM 2605 2004742 - 2004763 + g 74 -4.3 -4.82901 | opp_overlap 2004742, overlap 2004744 ACGCACGATCACAAT TGTCAGCCC CGCC GGGCCGATG TTTTTCTGCGCCCCG TERM 2606 2005147 - 2005123 - G 81 -12.2 -3.55622 | gap 1 CGGAATTGCCGCAAA CTGCCCACGGC CGCC GCCGTGG-CAG AACAATACTTTGTAG TERM 2607 2005569 - 2005533 - g 73 -10.3 -3.32698 | opp_overlap 2005536, overlap 2005531 2005536 CTACGTCACACAACA GAATCTATCGGATTGAC GAC ATAAAACCGATAGATTC GCTGTCAGGTAGCCC CKO_02166 2005511 - 2007529 + | hypothetical protein TERM 2608 2007581 - 2007601 + F 100 -11.8 -6.32976 | opp_overlap 2007581 GACTGAGCTATATTA CGGGGCGC TTTAT GCGCCCTG TTTTTTTATTTTTTT TERM 2609 2007841 - 2007826 - f 74 -5.4 -4.59853 | gap 1, overlap 2007827 2007829 GCAATCGCGTAAAAA CCACGCA TCT TGCG-GG CCTATAAGCCAGGCG TERM 2610 2008112 - 2008122 + G 74 -6.8 -4.34402 | GCCACAACCGGTACA GGCA CAA TGCC TTTTGGTATGGCGAA CKO_02167 2007977 - 2008795 + | hypothetical protein CKO_02168 2008847 - 2011129 + | hypothetical protein TERM 2611 2011173 - 2011192 + F 95 -11.4 -4.58395 | opp_overlap 2011173 AAAGCGTACAATAAA GGCTCCAC GTAA GTGGGGCC TTTTTAACAACTAAG TERM 2612 2011192 - 2011173 - f 83 -9.2 -4.33851 | opp_overlap 2011173 AAAGCGTACAATAAA GGCTCCAC GTAA GTGGGGCC TTTTTAACAACTAAG CKO_02169 2011294 - 2012061 + | pyruvate formate lyase-activating enzyme 1 CKO_02171 2013288 - 2012140 - | putative MFS family transporter protein CKO_02170 2013281 - 2013406 + | hypothetical protein CKO_02172 2013319 - 2013456 + | hypothetical protein CKO_02173 2013602 - 2014228 + | hypothetical protein CKO_02174 2015159 - 2014326 - | hypothetical protein CKO_02175 2015490 - 2015191 - | hypothetical protein TERM 2613 2015380 - 2015356 - G 79 -11.3 -3.74693 | TTCTATCGGACCAAA GTCCAGCGCGC GCA GCGGGCAGGAC TCGACGCAGATCGGT CKO_02176 2015491 - 2015721 + | hypothetical protein CKO_02177 2018263 - 2015819 - | hypothetical protein TERM 2614 2018480 - 2018467 - R 100 -9.5 -5.96219 | opp_overlap 2018467 CAGGCATAAAAAAAA GCGCC CGGA GGCGC TTTTTAAGCAGAGAG TERM 2615 2018467 - 2018480 + r 93 -9.5 -4.56597 | opp_overlap 2018467 CAGGCATAAAAAAAA GCGCC CGGA GGCGC TTTTTAAGCAGAGAG CKO_02178 2019797 - 2018505 - | seryl-tRNA synthetase TERM 2616 2019287 - 2019299 + g 73 -9.1 -3.90112 | GCGCGCGGTGCATAC GGGCA ATC TGCCC TTTCATTACCACAAA TERM 2617 2019854 - 2019832 - R 71 -7 -4.10188 | overlap 2019833 AATTAAAATAGGAAA CGTGACCACA GCC TGCAGTCACA GGGATACAGTGCCAA TERM 2618 2019887 - 2019900 + r 75 -6.7 -4.39828 | opp_overlap 2019872 TTACCGCAACGATCG CGCTA ACGG TAGCG TTTTGTGGGGCTATT CKO_02179 2021175 - 2019889 - | recombination factor protein RarA TERM 2619 2020040 - 2020023 - G 79 -7.7 -4.41348 | gap 1, opp_overlap 2020026 CCGGCGGGAAATAAA CCT-CGCC TGC GGCGTAGG CGTTTGGCTCATCAT TERM 2620 2020026 - 2020042 + g 74 -10.1 -3.69323 | opp_overlap 2020023 GCGGGAAATAAACCT CGCCTGC GGC GTAGGCG TTTGGCTCATCATGC TERM 2621 2020174 - 2020196 + g 77 -8.5 -4.07568 | gap 1, overlap 2020177 AGCCAGCGCCGCTTT G-AACGCGGT ATAA ACCGCGTTAC TTTTCGGCGCACAGG TERM 2622 2020177 - 2020192 + g 76 -10.4 -3.66908 | overlap 2020174 CAGCGCCGCTTTGAA CGCGGT ATAA ACCGCG TTACTTTTCGGCGCA TERM 2623 2020427 - 2020410 - G 71 -8.3 -3.81951 | opp_overlap 2020419 2020420 GGGCATACCAGTAAA GCGCCGC GTCC GGGGCGC TACCACGCACCGATT CKO_02180 2021857 - 2021243 - | outer-membrane lipoprotein carrier protein TERM 2624 2021689 - 2021722 + g 72 -2.3 -4.9725 | gap 1, opp_overlap 2021678, overlap 2021690 2021693 ATAAGTCGCCCTGGC CTTCCTGAACGGCGGC GCC GCTGCCG-TCAGTCAC TTTTTGTGTAAAGCT TERM 2625 2021693 - 2021718 + g 75 -11.9 -2.90854 | gap 1, opp_overlap 2021678, overlap 2021690 2021689 GTCGCCCTGGCCTTC CTGAACGGCGGC GCC GCTGCCG-TCAG TCACTTTTTGTGTAA CKO_02181 2025948 - 2021977 - | DNA translocase FtsK TERM 2626 2022708 - 2022722 + g 73 -5.6 -4.58466 | overlap 2022709 TCGGACGCCCCATCC GTGCCG CTT CGGCAA TTTTCTCGTTATAGC TERM 2627 2022798 - 2022823 + g 71 -9.7 -3.51034 | gap 1, opp_overlap 2022798, overlap 2022796 GTTCCATTTCATTAA CGCT-CCAGCGC AGT GCGTTGGCGGCG TCTTTCATATCGGTA TERM 2628 2024178 - 2024222 + g 78 -11.9 -3.24021 | opp_overlap 2024185, overlap 2024189 CACCACCGCTTACCG GGCTAAACGCAGGTGCAGCGG ATG CCGCCGCGCCTGCGGCCAGCG TTGCATCTTTGACGC TERM 2629 2024215 - 2024185 - G 100 -20.4 -3.54424 | opp_overlap 2024178 2024189 GCTTACCGGGCTAAA CGCAGGTGCAGCGG ATG CCGCCGCGCCTGCG GCCAGCGTTGCATCT TERM 2630 2024189 - 2024229 + g 71 -9.5 -3.55444 | opp_overlap 2024185, overlap 2024178 ACCGGGCTAAACGCA GGTGCAGCGGATGCCGCCG CGC CTGCGGCCAGCGTTGCATC TTTGACGCCTGCCGC TERM 2631 2025972 - 2025936 - G 88 -11.6 -4.13767 | gap 1, opp_overlap 2025939 2025943, overlap 2025940 2025943 TGCCCGATGCTAAAA CGGACAACAGCACCGGG TTGC CCCGGCACTGTTG-CTG TATGGATTAACAGGA TERM 2632 2025969 - 2025940 - G 90 -16.5 -2.75577 | opp_overlap 2025939 2025943, overlap 2025936 2025943 CGATGCTAAAACGGA CAACAGCACCGGG TTGC CCCGGCACTGTTG CTGTATGGATTAACA TERM 2633 2025966 - 2025943 - G 81 -12.4 -3.52113 | opp_overlap 2025943 2025939, overlap 2025940 2025936 TGCTAAAACGGACAA CAGCACCGGG TTGC CCCGGCACTG TTGCTGTATGGATTA CKO_02182 2026520 - 2026026 - | leucine-responsive transcriptional regulator TERM 2634 2026208 - 2026223 + g 83 -6.2 -4.91109 | AAACTAAATGACACT CTTGAA TTTC TTCAAG TTTTTGTACTGCGGC CKO_02183 2026633 - 2026845 + | hypothetical protein TERM 2635 2027205 - 2027188 - g 76 -9.1 -3.92075 | overlap 2027201 ACCGGTATGGAGAAA GGCGGTC AACT GACCACC ACGACGGAAGTGGAA CKO_02184 2027068 - 2028036 + | thioredoxin reductase TERM 2636 2028067 - 2028083 + F 100 -12.3 -4.85782 | opp_overlap 2028067 AACAAAAGTAAAAAA GGCGACT ATA AGTCGCC TTTATTTTTGCCCCG TERM 2637 2028083 - 2028067 - f 100 -12.3 -5.52347 | opp_overlap 2028067 AACAAAAGTAAAAAA GGCGACT ATA AGTCGCC TTTATTTTTGCCCCG TERM 2638 2028743 - 2028760 + G 86 -12.7 -3.73072 | TAATTTCCAGGCGCT TGCCCGC CTGA GCGGGCA TTTCCTCGACCGCTT TERM 2639 2028877 - 2028887 + G 72 -2.4 -4.91109 | GCACAATGGAAGTCC TGCG TCT CGCC TTTTTATCCTCCGGG TERM 2640 2029020 - 2029046 + G 73 -5.1 -4.57073 | gap 1, overlap 2029012 2029009 2029021 2029023 ACGCTTGCCGCCGGC TTCCTGGCGCTG ATTC TGGCGCC-GGAG TTTTTCCAGCCACTG CKO_02185 2028150 - 2029916 + | cysteine/glutathione ABC transporter membrane/ATP-binding component CKO_02186 2029917 - 2031638 + | cysteine/glutathione ABC transporter membrane/ATP-binding component CKO_02187 2031683 - 2032387 + | leucyl/phenylalanyl-tRNA--protein transferase TERM 2641 2032533 - 2032547 + TF 74 -5.6 -4.60487 | overlap 2032520 2032535 ACGTTGCGCTTCAAG TGCGGC TTT GCCGTG TTTTTCGGAGTAATG TERM 2642 2032535 - 2032545 + TF 74 -8.2 -3.91506 | overlap 2032520 2032533 GTTGCGCTTCAAGTG CGGC TTT GCCG TGTTTTTCGGAGTAA TERM 2643 2032573 - 2032600 + TF 95 -12.2 -4.14764 | gap 1, opp_overlap 2032571 2032599 TAATGCGCCAAACCT GATTTGCTGCGTT TTA AACGC-GCAAATC TTTACTTATTTAAAG CKO_02189 2032991 - 2032800 - | hypothetical protein CKO_02188 2032672 - 2032890 + | translation initiation factor IF-1 CKO_02190 2033031 - 2032897 - | hypothetical protein TERM 2644 2032927 - 2032943 + g 100 -7.2 -5.21236 | opp_overlap 2032917 2032927, overlap 2032921 GTAAAGATAAAAAAA GGTCGG TTTAT CCGGCC TTTTTGTTGTCCCTT TERM 2645 2032943 - 2032927 - G 100 -5 -5.88197 | opp_overlap 2032927 2032921, overlap 2032917 GTAAAGATAAAAAAA GGTCGG TTTAT CCGGCC TTTTTGTTGTCCCTT CKO_02191 2033340 - 2033215 - | hypothetical protein CKO_02192 2034296 - 2033385 - | hypothetical protein TERM 2646 2035244 - 2035218 - g 73 -5.9 -4.45115 | ATGAACACAAAACAA GAAATCGCAGA AGCCG TACGCGATTTC AACTCCGGCCGTTTT CKO_02193 2034405 - 2035271 + | hypothetical protein TERM 2647 2035659 - 2035630 - g 80 -9.3 -4.08216 | opp_overlap 2035630 CGACCGGCCGTAAAA CGCTGATCATCGC CGGC ACGATTACCAGCG TTTGCATGGCATTCC CKO_02194 2035293 - 2035970 + | hypothetical protein TERM 2648 2035972 - 2036004 + T 100 -15 -3.37344 | ATTCACAGCGCTAAT CGTATTCCCTGCTC CCCCA GGGCAGGGAATATG TTCATTGCGTAACCA TERM 2649 2036239 - 2036216 - T 70 -5.2 -4.45083 | opp_overlap 2036218, overlap 2036218 GCCATATTCAGAAAA GAGCTCGTAC GAAA GTACGGGCTT TTTTTTCGCATGTTG TERM 2650 2036218 - 2036237 + T 100 -10 -5.79526 | opp_overlap 2036218 2036216 CATATTCAGAAAAGA GCTCGTAC GAAA GTACGGGC TTTTTTTTCGCATGT CKO_02197 2036649 - 2036341 - | hypothetical protein TERM 2651 2036885 - 2036860 - R 100 -12.7 -5.75342 | opp_overlap 2036860 TGGCGGCAAAAAAAA TCCGTAACCTC AAAA GAGATTACGGA TTTTAGCGAGTTTAT TERM 2652 2036860 - 2036885 + r 87 -10.5 -4.13343 | opp_overlap 2036860 TGGCGGCAAAAAAAA TCCGTAACCTC AAAA GAGATTACGGA TTTTAGCGAGTTTAT TERM 2653 2036900 - 2036922 + r 95 -12.1 -4.14392 | ATTTTAGCGAGTTTA TCTGAACGC GACTG GCGTTCAGA TTTTACCGGTTACGA CKO_02198 2039216 - 2036940 - | ATP-dependent Clp protease ATP-binding subunit TERM 2654 2037944 - 2037958 + g 76 -5.6 -4.68103 | opp_overlap 2037932 2037943 CAACGGACTCAATAT CCGCCA CGT TGACGG TTTTCTTGCGCTTGC TERM 2655 2038276 - 2038292 + g 73 -9.4 -3.7795 | opp_overlap 2038263 ATCACGCGGATCTTA CCGCTG GAGAG CAGCGG TTTAATCAGGTTTGC TERM 2656 2039239 - 2039252 + r 84 -8.1 -4.58395 | TCCCCCAATTTTTAC GCCTG CATT CAGGC TTTTTCCAGCGTACA CKO_02199 2039567 - 2039247 - | ATP-dependent Clp protease adaptor protein ClpS TERM 2657 2039455 - 2039445 - G 75 -6.8 -4.45738 | opp_overlap 2039445 CACGTCAATAACAAA CTCC ATT GGAG TGTAATCATCATTGA TERM 2658 2040021 - 2040037 + G 76 -10.1 -3.83026 | opp_overlap 2040020 2040021 ACAGAACGCTTAAAG CCGGGCA GTC TGTCCGG TTTGATGTCCACCAG CKO_02200 2039891 - 2040112 + | hypothetical protein TERM 2659 2040143 - 2040175 + T 100 -13.6 -3.86346 | opp_overlap 2040149, overlap 2040149 GTGTACATCCCGCAG TCAAAATGCCAGCC CGATC GGCTGGCATTTTTA TTTCTGCGCCACTGC TERM 2660 2040169 - 2040149 - T 95 -12.6 -4.18197 | opp_overlap 2040149 2040143 ATCCCGCAGTCAAAA TGCCAGCC CGATC GGCTGGCA TTTTTATTTCTGCGC TERM 2661 2040149 - 2040169 + T 100 -12.6 -5.38054 | opp_overlap 2040149, overlap 2040143 ATCCCGCAGTCAAAA TGCCAGCC CGATC GGCTGGCA TTTTTATTTCTGCGC CKO_02201 2042195 - 2040249 - | macrolide transporter ATP-binding /permease protein TERM 2662 2041103 - 2041071 - G 79 -11.1 -3.68378 | opp_overlap 2041087, overlap 2041069 GTAGACGTTAAAATA GTCGCCGCTGACGCC ATT GGCGCTGGCGGCCAC GTCGATGTTGCCGTA TERM 2663 2041373 - 2041387 + g 71 -4.2 -4.63218 | opp_overlap 2041361 TAATCCCCAGCATGG TGAGCA AGG TGCGCA TTTTATTGGCGGCCA CKO_02202 2043307 - 2042192 - | macrolide transporter subunit MacA TERM 2664 2043404 - 2043385 - R 73 -4.2 -4.7889 | gap 1, overlap 2043387 ACAAACACTGAAAAA CG-CGCCGA ATA TCGCCGTCG CTATCCATTGCTGGG TERM 2665 2043462 - 2043499 + r 84 -4.7 -5.40072 | overlap 2043463 GTTTCGCCGTTAATC CGCTCTCCCGCGCGC CAGCCAGA GTACGCGGGAGAACA TTTTTTTGAACAGCG TERM 2666 2043463 - 2043498 + r 72 -8.2 -3.83561 | overlap 2043462 TTTCGCCGTTAATCC GCTCTCCCGCGCGC CAGCCAGA GTACGCGGGAGAAC ATTTTTTTGAACAGC CKO_02203 2045174 - 2043456 - | hypothetical protein TERM 2667 2044638 - 2044626 - G 80 -10.5 -3.86015 | GATGCGTCGCATAAA GCGCG CAT CGCGC AGGCGCAGTACCGGC TERM 2668 2045736 - 2045748 + G 84 -9.1 -4.2349 | AAGCAGGCTTTGATG CCGCT GCC AGCGG TTTTGCCTCTAACGG CKO_02204 2045330 - 2046100 + | aquaporin Z TERM 2669 2046170 - 2046196 + F 100 -10.1 -5.89827 | gap 1, opp_overlap 2046169 2046166 CAGTACAATAAGCAG GCCGGGTAAGCG TTAG CGCC-ACCCGGC TTTTTTTTGCTCCTT CKO_02205 2046276 - 2047175 + | hypothetical protein TERM 2670 2047515 - 2047527 + G 76 -3.3 -5.02502 | TGACGTTGACAACTT TGCCC CGC GTGCA TTTTTCTCTACTCTG CKO_02206 2047285 - 2048973 + | hydroxylamine reductase TERM 2671 2049691 - 2049675 - g 72 -12.3 -2.62515 | AAGTTCTTTACACCA GTTGCCG AAG CGGCAAC GGAGGGTCTGAAGTT TERM 2672 2049882 - 2049856 - g 81 -13 -3.06696 | TTTCCGGTGAATATA CGGTCAGCAGCA CCA TGACGCTGACCG ATGCGGAAATCGCCG CKO_02207 2049018 - 2049953 + | HCP oxidoreductase, NADH-dependent TERM 2673 2049976 - 2050018 + T 93 -14.2 -3.53444 | overlap 2049978 TTGCCGGATGACGCT TCGCTTATCCGGCCTGCC ATCTTTC GGCAGGCCGGGTAAGGCA TTTACGCCGCCATCC TERM 2674 2049978 - 2050017 + T 95 -16.6 -2.71924 | gap 1, overlap 2049976 GCCGGATGACGCTTC GC-TTATCCGGCCTGCC ATCTTTC GGCAGGCCGGGTAAGGC ATTTACGCCGCCATC CKO_02208 2050444 - 2050043 - | hypothetical protein CKO_02210 2050667 - 2050431 - | hypothetical protein TERM 2675 2051148 - 2051129 - gH 72 -9.2 -3.53224 | opp_overlap 2051145, overlap 2051130 GACGTTGCGCTGAAA CCGGCGCC GGAA AGCGCCAG CGCCCACTGGTATCA TERM 2676 2051773 - 2051796 + GH 72 -9.4 -3.49475 | TACCTGCGACGTCGG CACGCCGACC GTAT GGGCGGCGCG TTATCTGAAAATGAA TERM 2677 2052009 - 2051994 - gH 78 -6.2 -4.56775 | overlap 2051995 AGCTGCCGGTAAAAA TTGTTG TTTT CAACAA CAGCGTGCTGGGCTT CKO_02209 2050631 - 2052349 + | pyruvate dehydrogenase TERM 2678 2052858 - 2052893 + G 71 -8.2 -3.90316 | gap 1, opp_overlap 2052854, overlap 2052856 GTGGGAATTTACCCG CGAGCGCGGTCTGGCGT TGC ACGTT-GACGGCGCGCG TATTTTTAACGCGGT TERM 2679 2053354 - 2053374 + G 71 -4.6 -4.57569 | gap 1, overlap 2053356 2053357 GAACAGCTTGCTGAA GTCGCCGCC CACT GGCG-CGCC TTTTTAACCCGCTAA CKO_02211 2052433 - 2053389 + | L-threonine aldolase TERM 2680 2054313 - 2054300 - gf 81 -3.8 -5.16071 | AAGGAGGAAGAAAAA CTGG TCAACT CCAG CGACTGGGGATACGA CKO_02212 2053400 - 2054830 + | hypothetical protein CKO_02213 2054710 - 2054913 + | hypothetical protein CKO_02214 2054929 - 2055942 + | hypothetical protein TERM 2681 2055986 - 2055967 - T 100 -13.6 -5.48063 | opp_overlap 2055963 2055960 AGTGAACACAAAAAA CGGCAACC ATCA GGTTGCCG TCAGATTGTTATTGT CKO_02215 2057967 - 2056093 - | hypothetical protein TERM 2682 2057162 - 2057151 - G 72 -2.2 -4.90079 | AGGCGAAGAAGAAAA TAGC GCTC GCCA GGTTCAGCCAGGTAT TERM 2683 2057789 - 2057802 + g 83 -8.1 -4.50976 | TCCTGCTCCTTTTTC GCCAG ATCG CTGGC TTTTATGGTGTAAGG CKO_02216 2058502 - 2058059 - | hypothetical protein TERM 2684 2058590 - 2058565 - R 79 -12.5 -2.8805 | ATTATTTTTTAGAGA TGGCCGCCCCC AGAC AGGGGCGGCTA CCCTTCGCGGATAGA CKO_02217 2061344 - 2058636 - | hypothetical protein TERM 2685 2059845 - 2059828 - G 70 -9.1 -3.6993 | overlap 2059826 2059830 GATTTATTGAAAATA TACGGCG CTTC CGCCGCA GCGTCGTAACGGTAT TERM 2686 2059843 - 2059830 - G 70 -9.5 -3.42605 | overlap 2059828 2059826 TTTATTGAAAATATA CGGCG CTTC CGCCG CAGCGTCGTAACGGT TERM 2687 2060484 - 2060466 - G 77 -7.3 -4.34223 | opp_overlap 2060470, overlap 2060468 AACGGAAGCAACAAA CCGCGCG CGAAT CGCGCTG TCATGCATCTGGAAG TERM 2688 2061477 - 2061461 - R 70 -2.3 -4.92783 | opp_overlap 2061461, overlap 2061462 AACCCATTATAAAAA TGAAATA ATC TATTTCG CTTTACGCTCCTCCC CKO_02218 2062406 - 2061609 - | hypothetical protein TERM 2689 2062398 - 2062409 + g 74 -2.2 -5.07486 | opp_overlap 2062392, overlap 2062392 CCGAAACAACATGAT CGTA TTCA TGCG TTTTTATTCCAGCTC CKO_02219 2062888 - 2062403 - | hypothetical protein CKO_02220 2064030 - 2062885 - | hypothetical protein CKO_02221 2065062 - 2064046 - | hypothetical protein TERM 2690 2065021 - 2065038 + g 100 -12.7 -4.58283 | opp_overlap 2065017 2065015 2065014, overlap 2065024 AATCAACACCACCAG CAGCGCG ACTC CGCGCTG TTTTTGCGCCGATTG CKO_02222 2065724 - 2065059 - | hypothetical protein CKO_02223 2066101 - 2065721 - | hypothetical protein CKO_02224 2066579 - 2066094 - | hypothetical protein CKO_02225 2067028 - 2066579 - | hypothetical protein TERM 2691 2066992 - 2067011 + g 100 -6.4 -5.75342 | opp_overlap 2066991 2066994, overlap 2066994 CGAGCAAAGTAAACC CAGCCTGA CCTT TCAGGCTA TTTTTTTTCACAGAC TERM 2692 2066994 - 2067009 + g 89 -9 -4.52949 | opp_overlap 2066991 2066994, overlap 2066992 AGCAAAGTAAACCCA GCCTGA CCTT TCAGGC TATTTTTTTTCACAG CKO_02226 2068239 - 2067031 - | hypothetical protein CKO_02227 2069717 - 2068239 - | hypothetical protein TERM 2693 2069177 - 2069192 + g 73 -5.4 -4.59109 | gap 1, overlap 2069180 GCAGGGAGATGCGAC CGTCCTG CGG CAGG-CG TTTTTCGGCGATATC TERM 2694 2069674 - 2069697 + g 75 -3.8 -4.93547 | AGCACACCGTTGTCT TTTGCGAAGC TGCT GCTGCACAAA TTTTTGCTTAATTCA CKO_02228 2071654 - 2069732 - | hypothetical protein TERM 2695 2070906 - 2070925 + g 70 -9.2 -3.67775 | AGCTGCGCTATCAGC GTGCGGGT ACGC GCCCGCGC TTCTTCGCTGCCGCT TERM 2696 2071293 - 2071307 + g 70 -2.8 -4.8048 | CGGGTAATAATTTCA TCCC CTTTACC GGGA TTTTTGCTGTCGGCA CKO_02229 2072441 - 2071668 - | hypothetical protein TERM 2697 2071951 - 2071967 + g 78 -5.8 -4.82901 | opp_overlap 2071934, overlap 2071934 TGCAGGCTCTCTGCA CCGGCA TCGTT TGTCGG TTTTTGTAGCGGGCC TERM 2698 2072114 - 2072146 + g 81 -8.3 -4.25104 | overlap 2072113 2072109 CTCCCACGAGGCTTT CGCCTTCGCGATAAC TTT GCTGTCCCGCAGGCG TTTTAATAACGGCAA CKO_02231 2072548 - 2072441 - | hypothetical protein CKO_02230 2072449 - 2072592 + | hypothetical protein CKO_02232 2072567 - 2072719 + | hypothetical protein TERM 2699 2072745 - 2072765 + G 95 -8.2 -4.9445 | opp_overlap 2072745, overlap 2072739 2072755 CAGCCGTTTGGCAAA CTCACCCG GCGAA CGGGGGAG TTTTTCGTTCATTAT TERM 2700 2072836 - 2072815 - g 81 -3.7 -5.14563 | gap 1, opp_overlap 2072824 TGTTGCAGGAAAAAA CCAACG-TGC CCG GCATCATCGG TCTGTTTTCTGACGA TERM 2701 2073029 - 2072992 - g 79 -3.4 -5.27023 | overlap 2072993 2072996 AGGGTAAAAACAAAA TTTATGCCATTGATGC CATTTT GCGCCAATGGCATGAG GAAACGCCTTCGCGT CKO_02233 2072700 - 2074277 + | hypothetical protein CKO_02234 2074277 - 2074777 + | hypothetical protein CKO_02235 2075487 - 2074864 - | hypothetical protein CKO_02236 2076610 - 2075780 - | hypothetical protein TERM 2702 2076508 - 2076532 + g 100 -14.4 -3.93695 | CCGCCTGTGCCTGAT GACGGGTATC CAGCT GATACCCGTC TTTATCAATAATCCC CKO_02237 2076930 - 2076607 - | hypothetical protein CKO_02238 2077058 - 2077573 + | putative lipoprotein TERM 2703 2077613 - 2077643 + F 95 -12.1 -3.94877 | gap 1, opp_overlap 2077603 2077613 2077636, overlap 2077603 CATAAGCCCCACAAA TTGTCTGGCATTCT GCAT AGAATGCC-GACAA TTATTCTTGCCGCCT TERM 2704 2077643 - 2077613 - f 95 -12.1 -3.90328 | gap 1, opp_overlap 2077603 2077613, overlap 2077603 2077636 CATAAGCCCCACAAA TTGTCTGGCATTCT GCAT AGAATGCC-GACAA TTATTCTTGCCGCCT TERM 2705 2078193 - 2078177 - g 81 -8 -4.26903 | opp_overlap 2078177 2078176 TCGACTTCACGAAAA CGCCTT CCGAT AAGGCG ATTCGTGAATTACGC CKO_02239 2077918 - 2078694 + | arginine transporter ATP-binding subunit TERM 2706 2079122 - 2079096 - g 79 -3 -5.22039 | gap 1 TTGAAAGGCAAAAAA GTGGGC-GTAC AGAATG GCACTACCCAC CAGAAGTTCATCATG CKO_02240 2078706 - 2079443 + | hypothetical protein TERM 2707 2079494 - 2079504 + G 71 -8.2 -3.90318 | opp_overlap 2079475, overlap 2079470 CGCCGGGATGACCGT CGGC CTT GCCG TTTGTGCGCTGATCA TERM 2708 2080038 - 2080027 - g 78 -2.2 -5.27335 | overlap 2080030 TGCTGCAAACAAAAA GCAT CGCC ACGC GCACTCAGGAGCCGT CKO_02241 2079450 - 2080166 + | arginine transporter permease subunit ArtQ CKO_02242 2080166 - 2080834 + | arginine transporter permease subunit ArtM TERM 2709 2080973 - 2080947 - Tf 83 -9.5 -4.18351 | gap 1, opp_overlap 2080947, overlap 2080940 AAACGAAATCATAAA GACGGACAAGCC ACTA AGC-TGTCCGTC TTTTTTTATAACAAC TERM 2710 2080947 - 2080973 + TF 100 -8.8 -5.60993 | gap 1, opp_overlap 2080947 2080940 AAACGAAATCATAAA GACGGACAAGC CACTAA GCT-GTCCGTC TTTTTTTATAACAAC CKO_02244 2081184 - 2080960 - | hypothetical protein CKO_02243 2081096 - 2081827 + | hypothetical protein TERM 2711 2081834 - 2081862 + Tr 100 -23.3 -3.48276 | opp_overlap 2081828 CCGCAGTAATCTTCC TTGCCGGATGGCG CTG CGCCATCCGGCAA TTCTATAAGGGCACA CKO_02245 2083334 - 2081865 - | hypothetical protein TERM 2712 2082401 - 2082359 - G 80 -9.1 -4.11216 | gap 2, opp_overlap 2082371 GCGCCAGCTCGAAAA GCTGCTGCGACAGGTGCCGCA CCT TGTGCC-CCTGACGCAGC-GC AGTGGCGAGATATTG CKO_02246 2084025 - 2083318 - | hypothetical protein CKO_02247 2085288 - 2084158 - | 23S rRNA methyluridine methyltransferase CKO_02248 2085817 - 2085329 - | hypothetical protein CKO_02249 2085906 - 2085760 - | hypothetical protein TERM 2713 2085848 - 2085823 - GR 91 -11.2 -4.25104 | opp_overlap 2085823, overlap 2085808 2085807 CGTCTTCCATGAAAA CGTTACCGCG TTTGCC CACGGTAACG TGTTGCCAGGTTGGC CKO_02250 2086723 - 2085878 - | putrescine transporter subunit: membrane component of ABC superfamily TERM 2714 2086099 - 2086077 - GR 87 -8.5 -4.60797 | gap 1 GGGCCAGAGACAAAA CTGG-CGATC ACCA GATCGTCCAG CGACAGCGTGAAAGC CKO_02251 2087673 - 2086720 - | putrescine transporter subunit: membrane component of ABC superfamily TERM 2715 2087624 - 2087638 + g 70 -3.4 -4.82901 | CGCGCCAGCCACAGC GTCAGG CCG CCGGGC TTTTTATCGCGAGCC CKO_02252 2088816 - 2087683 - | putrescine transporter ATP-binding subunit TERM 2716 2088901 - 2088867 - R 73 -11.4 -2.5639 | opp_overlap 2088870, overlap 2088853 2088866 2088865 ACGCACCATAAAAGT GCGCATTGCCCGGTAA ACC TCACCGGGCAACGTTC TGATACAGCGGCTTA TERM 2717 2088870 - 2088898 + r 82 -11.7 -3.40403 | opp_overlap 2088867 2088866 2088865 CACCATAAAAGTGCG CATTGCCCGGTAA ACC TCACCGGGCAACG TTCTGATACAGCGGC CKO_02253 2090026 - 2088914 - | putrescine transporter subunit: periplasmic-binding component of ABC superfamily TERM 2718 2090085 - 2090103 + r 72 -6 -4.42386 | opp_overlap 2090072 2090085 2090087 AGTTGCATTCTAAGA TATGCAAG AAA CGTGCATA TTTTGTCACTCGACA TERM 2719 2090405 - 2090380 - R 73 -7.6 -4.12151 | gap 1, opp_overlap 2090381 2090382 2090398 2090399 2090402, overlap 2090382 ATAAAAAAATGCAAA CAGCAGCCGCT CTGGC AGCGACTGC-G TTATACGCGTCATTC TERM 2720 2090404 - 2090382 - R 82 -11.3 -3.61925 | opp_overlap 2090382 2090381 2090398 2090399 2090402, overlap 2090380 AAAAAAATGCAAACA GCAGCCGCT CTGGC AGCGACTGC GTTATACGCGTCATT CKO_02254 2090920 - 2090444 - | hypothetical protein CKO_02255 2091955 - 2091011 - | hypothetical protein CKO_02256 2092688 - 2091966 - | nitroreductase A TERM 2721 2092471 - 2092526 + g 71 -7.5 -3.93695 | gap 1, opp_overlap 2092464, overlap 2092475 2092508 ACCCAGAATTCCGCG GCC-TGCGCAACGTGCTTTTGCCC GCCCGTCAG GGGCACCAGCGCTTCGCGCATGGC TTTATCGGTAATGCG CKO_02257 2092962 - 2092672 - | hypothetical protein CKO_02258 2093114 - 2093398 + | glutaredoxin 1 TERM 2722 2093410 - 2093428 + T 88 -12.4 -3.52449 | overlap 2093402 CTGATCGCTGCTTTA CGCCCTCT CCC GGAGGGCG TTATCGGTTCTTTTT CKO_02259 2093731 - 2093429 - | hypothetical protein TERM 2723 2093499 - 2093485 - G 85 -9.2 -4.46652 | TAAATAAAAAGCAAA GCGCGC CGA GCGCAC ACCAGAACACCGCAC TERM 2724 2093664 - 2093649 - G 100 -6.1 -5.78622 | CGATGGGAAAAAAAA CTGGC CACCGC GCCAG GTAACGTAAAAAACA CKO_02260 2094077 - 2095762 + | hypothetical protein TERM 2725 2095875 - 2095911 + TF 86 -5.2 -5.4833 | gap 2 CCCCAATTTGTGGAG CCCATCAACCCCG--CCA TTT TGGTTCAAGGTTGATGGG TTTTTTGTTGCCTGA CKO_02263 2096487 - 2095930 - | hypothetical protein TERM 2726 2096491 - 2096514 + Gr 83 -12.6 -3.29381 | overlap 2096481 TTTTCCTCTCATCAC GTTTGTGTAC AAAT GTACACAAAC TTGCTAGTGTTGTCC CKO_02262 2096380 - 2096562 + | hypothetical protein CKO_02264 2096671 - 2096546 - | hypothetical protein TERM 2727 2097079 - 2097105 + G 79 -2.8 -5.19251 | ACGCTCATATCCTGC TGGCGGCTCTCG TCG CGATCGTCCCCA TTTTTATTGCTATTC TERM 2728 2097162 - 2097149 - g 91 -9.5 -4.59773 | overlap 2097151 CGGCACGGGGAAAAA CGCCG CCGA CGGCG CCCACACAACGGAAA CKO_02265 2096703 - 2097767 + | hypothetical protein TERM 2729 2098495 - 2098468 - g 95 -12.6 -4.18018 | TTTTGCGATGGAAAA CGCCGGAGCGGC GGTG GCCTCTGCGGCG AAATATCGGGCGGGC CKO_02266 2097767 - 2098582 + | hypothetical protein CKO_02267 2099852 - 2098620 - | hypothetical protein TERM 2730 2099811 - 2099833 + g 73 -9 -3.88985 | overlap 2099813 AGGGAAAAGCAGTGC CTGACGTCCG AGC CGGACGCCTG TTTGTGAAAGGTTTT TERM 2731 2099813 - 2099831 + g 74 -10.2 -3.52678 | overlap 2099811 GGAAAAGCAGTGCCT GACGTCCG AGC CGGACGCC TGTTTGTGAAAGGTT CKO_02268 2100165 - 2100773 + | undecaprenyl pyrophosphate phosphatase TERM 2732 2100799 - 2100821 + F 83 -10.6 -3.66844 | opp_overlap 2100799 2100789 AAAGAGTAGTATTAA GCGCTCTGTA CTG TGCAGAGTGC TTATTCAACTGTCCA CKO_02269 2100845 - 2101603 + | DNA-binding transcriptional repressor DeoR CKO_02270 2102895 - 2101654 - | D-alanyl-D-alanine carboxypeptidase fraction C TERM 2733 2103000 - 2103012 + H 81 -3.3 -5.41143 | opp_overlap 2102987, overlap 2103001 ACGCCACGCTGCGCT GCCTC CGT GAGGA TTTTTTTGCAAGCTG TERM 2734 2103160 - 2103146 - g 76 -2.7 -5.10029 | opp_overlap 2103157 ACCAACGTCAAAAAA GTGCG ATGGA CGCTC GACGAACTGGAGCTG CKO_02271 2103101 - 2103727 + | hypothetical protein CKO_02272 2104839 - 2103724 - | hypothetical protein TERM 2735 2104938 - 2104921 - R 100 -12.7 -4.48175 | opp_overlap 2104921 AAAACTTAACGAAAA GGGGGAG TCGC CTCCCCC TGACTTAGACCTGTT TERM 2736 2104921 - 2104938 + r 78 -12.7 -2.53759 | opp_overlap 2104921 AAAACTTAACGAAAA GGGGGAG TCGC CTCCCCC TGACTTAGACCTGTT CKO_02273 2105359 - 2104943 - | biofilm formation regulatory protein BssR CKO_02274 2105531 - 2105430 - | hypothetical protein CKO_02275 2106013 - 2105441 - | hypothetical protein TERM 2737 2105578 - 2105590 + gH 72 -9.1 -3.54408 | overlap 2105573 CAATGTAACCCGCCA GCCGA AAA TCGGC TTCGTTTCCCTGGGC CKO_02276 2106041 - 2106883 + | hypothetical protein CKO_02277 2107906 - 2106995 - | hypothetical protein CKO_02278 2108829 - 2107909 - | hypothetical protein CKO_02279 2110473 - 2108935 - | hypothetical protein TERM 2738 2110065 - 2110081 + g 74 -2.9 -4.8543 | overlap 2110067 TCGTCGGATCGACCG CTTCGGT TTT ATCGATG TTTTTATACAGGTTG CKO_02280 2112431 - 2110509 - | glutathione transporter ATP-binding protein CKO_02281 2113332 - 2112391 - | L-asparaginase CKO_02282 2113538 - 2114773 + | molybdopterin biosynthesis protein MoeA TERM 2739 2114935 - 2114958 + GT 82 -11 -3.56594 | CTCGCGGGCGCGGGC GTTGGGCAGC TCAC GCTGCTCGAC TTTGACACCGTTTCA CKO_02284 2115672 - 2115484 - | hypothetical protein CKO_02283 2114773 - 2115540 + | molybdopterin biosynthesis protein MoeB CKO_02285 2116384 - 2115716 - | fructose-6-phosphate aldolase TERM 2740 2115892 - 2115882 - G 70 -6.8 -4.07568 | opp_overlap 2115887 CGCGGCGTTTTAAAA CTGG CCG CCAG CACTTTGGCGTGCGG TERM 2741 2116460 - 2116479 + H 73 -8 -4.04579 | opp_overlap 2116460 2116463, overlap 2116463 TGACCTGCGTCAACA TAACTTTC ATTC GAAAGTTA TTTAATCTTTATACG CKO_02286 2116514 - 2117413 + | hypothetical protein TERM 2742 2117732 - 2117709 - g 71 -4.5 -4.65895 | overlap 2117711 2117714 TCGTGGATTGAAAAA GAGATCGAC GATCTG GCCGATCGC CCTGGCGCCGGTTTT TERM 2743 2117781 - 2117769 - g 70 -5.5 -4.46675 | overlap 2117770 AGCGAAGAGAACAAA CGCGT TTT ACACG CCGTGTGCCCGTGGT TERM 2744 2118339 - 2118329 - g 74 -6.8 -4.3586 | overlap 2118330 TGATGTAGAGCAAAA CCAG ACG CTGG ATCGCGAACACGCGA TERM 2745 2119166 - 2119152 - g 80 -4.2 -5.00616 | GCGGCGGTGAAAAAA CTGGTC TTT GAACAG GGGGCTATCGGCCAA TERM 2746 2119396 - 2119352 - g 84 -12.7 -3.45737 | opp_overlap 2119363 GAAGCAGTATCACAA CCCGCGTTACGGTCGCGGCCC GAC GGGCGGCAACTATTACGCCGG AACCTCGTCCATCTC CKO_02287 2117418 - 2119850 + | hypothetical protein TERM 2747 2119865 - 2119887 + F 100 -11.3 -5.1287 | opp_overlap 2119865 ATTTGTAGACACAAA TCCCCGGCA TACAT TGCTGGGGA TTTTTTGCATATGAC TERM 2748 2119887 - 2119865 - f 79 -9.1 -4.128 | opp_overlap 2119865 ATTTGTAGACACAAA TCCCCGGCA TACAT TGCTGGGGA TTTTTTGCATATGAC TERM 2749 2121064 - 2121089 + G 71 -9.7 -3.53224 | gap 1 ATATCTTCGGTTTCA GTCGCGGTGCAG CCG CTGC-CCGCCAC TTTGCCAACCGCGTC TERM 2750 2121665 - 2121651 - g 70 -3.4 -4.77438 | AGCCAGCAGCAAAAA CGCACC TTT GCCGCG CTGACGTTGCGCCAT CKO_02288 2120076 - 2122061 + | hypothetical protein CKO_02291 2122831 - 2122460 - | hypothetical protein CKO_02289 2122058 - 2122741 + | hypothetical protein CKO_02293 2123559 - 2123218 - | hypothetical protein CKO_02290 2122747 - 2123427 + | hypothetical protein TERM 2751 2123460 - 2123477 + gFH 77 -9.1 -3.85165 | opp_overlap 2123458 2123460 AGGCAACTACAAATA CGGCGAC TTCA GTTGCCG TTTCACTTTCGAATG TERM 2752 2123635 - 2123622 - gH 71 -4.5 -4.63527 | CGACGACGCCAAAAA GTACG ATCA CGCAC GATTTATGGCGCAGT TERM 2753 2123695 - 2123668 - gH 100 -5.5 -5.65513 | gap 1 CAGGAACTAAAAAAA CGC-GGCATCGA ATTTG TCGTCGCCAGCG GCAATCAGTATTACC CKO_02292 2123530 - 2124378 + | hypothetical protein TERM 2754 2124404 - 2124388 - fH 84 -13.7 -2.89683 | opp_overlap 2124388 ATCTGATTCCAGATA CCGGAGC GCT GCTCCGG TTTCCTCCTGCTTTT TERM 2755 2124388 - 2124404 + FH 100 -13.7 -3.83705 | opp_overlap 2124388 ATCTGATTCCAGATA CCGGAGC GCT GCTCCGG TTTCCTCCTGCTTTT CKO_02294 2124529 - 2125791 + | hypothetical protein CKO_02295 2126879 - 2125788 - | hypothetical protein TERM 2756 2126128 - 2126118 - G 74 -4.6 -4.7254 | overlap 2126104 2126119 ACCGCCGACCAAAAA CGCC GTC GGCA ACGCCTTATCCGGCG TERM 2757 2127476 - 2127502 + G 71 -5.7 -4.2573 | overlap 2127477 GTATCTTCCACGCGG GCGCCGGAAGC TGGCT GCATCTGGCGA TTTTGCGCTTCTTTA CKO_02296 2127154 - 2128455 + | hypothetical protein TERM 2758 2130799 - 2130789 - g 78 -6.8 -4.56597 | overlap 2130791 CCGGCGGGGGAAAAA CGCA CGC TGCG GGTGAATGGCGTTGA CKO_02297 2128473 - 2130836 + | hypothetical protein TERM 2759 2130888 - 2130913 + T 90 -6.8 -5.42259 | gap 1, opp_overlap 2130902 CAAACTGTAGCGTAG GCCCGGTAAGC ATAGC GCC-ACCGGGC TTTTTTTAGCCGTCG CKO_02298 2132490 - 2130919 - | hypothetical protein TERM 2760 2131040 - 2131027 - G 70 -6.7 -4.2123 | CAGCGAGCTAACAAA CTCAC GGTC GTGAG AAACGAAAATCAGCG TERM 2761 2131104 - 2131141 + g 70 -9.9 -3.33711 | gap 1, overlap 2131101 ATTCGATCGATTCCA TATCCAGGTGGTTGGTCG GTT CGTCCA-TCACCAGGATA TTCGGTTTCTGCATC TERM 2762 2131193 - 2131212 + g 70 -5.6 -4.52047 | CGCCCTTTTTCACCA CCGGAGAG CACC TTCGCCGG TTTTCTGATATCGTC TERM 2763 2131708 - 2131738 + g 76 -3.3 -5.10208 | gap 1, opp_overlap 2131715, overlap 2131710 2131735 AGCGCTAAAGCGGCT GACGAAAGATTGCA GGTC TGCAATC-TGCGCC TTTTTCTTGGCGTTA CKO_02299 2132733 - 2133653 + | hypothetical protein CKO_02300 2134843 - 2133734 - | hypothetical protein CKO_02301 2135313 - 2134840 - | manganese transport regulator MntR TERM 2764 2135650 - 2135629 - H 71 -7.2 -4.17048 | opp_overlap 2135630 2135632, overlap 2135630 CCCTCGTCAAAATAA CGCGGCGT CGCGGT ACGCCGCT CCATTTTGACGCCAT TERM 2765 2135649 - 2135630 - H 73 -10.7 -3.09908 | opp_overlap 2135630 2135632, overlap 2135629 CCTCGTCAAAATAAC GCGGCGT CGCGGT ACGCCGC TCCATTTTGACGCCA TERM 2766 2135630 - 2135649 + H 71 -10.7 -2.74605 | opp_overlap 2135630 2135629, overlap 2135632 CCTCGTCAAAATAAC GCGGCGT CGCGGT ACGCCGC TCCATTTTGACGCCA TERM 2767 2135678 - 2135697 + H 72 -5.6 -4.55287 | opp_overlap 2135681, overlap 2135682 CATCTTCGCGGCCAT CAAGGCGC GCTC GCGCTGTG TTTTATCTCAATACC CKO_02302 2135721 - 2135921 + | hypothetical protein TERM 2768 2136432 - 2136443 + G 86 -7.2 -4.7629 | opp_overlap 2136430 2136428 2136432 TTAAATTAAAAGACA CCGG CTAC CCGG TTTTTCGCTTCGTGA TERM 2769 2136644 - 2136666 + G 71 -4.8 -4.67552 | CACTGGGATAACACC CCGTTCGC CAGTACC GCCAACGG TTATTTTTTCATGGA CKO_02303 2135918 - 2137504 + | hypothetical protein TERM 2770 2137646 - 2137607 - T 90 -15.2 -2.69151 | opp_overlap 2137618, overlap 2137618 CCGGCCTACACATCA GACAAAAAAAATCCGCCC CGAG GGGCGGATTTTTCATATC ACCGAAGTGATTAGA TERM 2771 2137618 - 2137635 + T 100 -12.7 -4.8048 | opp_overlap 2137607 2137618 ATCAGACAAAAAAAA TCCGCCC CGAG GGGCGGA TTTTTCATATCACCG TERM 2772 2137635 - 2137618 - T 100 -12.7 -6.0427 | opp_overlap 2137618, overlap 2137607 ATCAGACAAAAAAAA TCCGCCC CGAG GGGCGGA TTTTTCATATCACCG CKO_02304 2138172 - 2137657 - | outer membrane protein X CKO_02306 2138364 - 2138218 - | hypothetical protein CKO_02305 2138225 - 2138383 + | hypothetical protein TERM 2773 2138420 - 2138436 + FH 86 -2.9 -5.75342 | overlap 2138422 CAATTCATCGATATT TTACGGA TTC TCCGGGA TTTTTTTTCAACGAA TERM 2774 2138998 - 2138965 - g 72 -11.6 -3.06183 | gap 1, opp_overlap 2138957 2138955 2138970 CGCATGTTGATTTAA CGGGCGCC-GCGCTG GCGCT CGGCGCAGGCGCCTG CTGGGCTATCTATAT CKO_02307 2138526 - 2139410 + | threonine and homoserine efflux system TERM 2775 2139417 - 2139449 + F 83 -10.8 -3.78909 | opp_overlap 2139419, overlap 2139413 2139419 ATTAATTAACGTTAC AATTCTGCATGATT TGCAT AATCATGCAGAATA TTGCTTTTATCCTTC TERM 2776 2139447 - 2139419 - f 86 -13.4 -3.38178 | opp_overlap 2139417 2139413 2139419 TAATTAACGTTACAA TTCTGCATGATT TGCAT AATCATGCAGAA TATTGCTTTTATCCT TERM 2777 2139419 - 2139447 + F 86 -13.4 -3.46008 | opp_overlap 2139419, overlap 2139417 2139413 TAATTAACGTTACAA TTCTGCATGATT TGCAT AATCATGCAGAA TATTGCTTTTATCCT CKO_02308 2139425 - 2139535 + | hypothetical protein CKO_02309 2139450 - 2139545 + | hypothetical protein CKO_02310 2139716 - 2140219 + | DNA starvation/stationary phase protection protein Dps TERM 2778 2140246 - 2140263 + F 90 -10.5 -4.29656 | opp_overlap 2140246 AGTAAGACCTATGAA CCCTCGC TTCG GCGGGGG TTTTGCACTTTTATA CKO_02311 2140584 - 2141330 + | glutamine ABC transporter periplasmic protein TERM 2779 2141346 - 2141390 + TF 76 -9.2 -3.74224 | gap 1, overlap 2141346 TAACGCTGTATTTTA GCTCGTTACGCCCGGT-GGCG CTTG CGCTTACCGGGCGTACAGGCC TTTGAGTACTTTCAC TERM 2780 2141346 - 2141389 + TF 79 -12.5 -2.84053 | overlap 2141346 TAACGCTGTATTTTA GCTCGTTACGCCCGGT-GGCG CTTG CGCTTACCGGGCGTA-CAGGC CTTTGAGTACTTTCA CKO_02313 2141484 - 2141323 - | hypothetical protein TERM 2781 2141816 - 2141837 + GH 83 -10.1 -4.18506 | GCGTTAGGACTGTCT CGCGGCGAA ACCA TTCGCCACG TTATTTTACCGCTCG CKO_02312 2141426 - 2142085 + | glutamine ABC transporter permease protein TERM 2782 2142680 - 2142668 - g 70 -9.1 -3.76224 | TTGTGACCCACGAAA TCGGC TTT GCCGA GAAAGTGGCCTCCCG CKO_02314 2142082 - 2142804 + | glutamine ABC transporter ATP-binding protein TERM 2783 2142812 - 2142837 + F 100 -19.1 -3.5393 | overlap 2142830 2142831 TTTCCTGAGGCACGC CCCTCCCTTCC GCCC GGAAGGGAGGG TTTCCCCGGAATCCT TERM 2784 2142830 - 2142856 + F 72 -9.4 -3.61178 | overlap 2142812 2142831 TCCCTTCCGCCCGGA AGGGAGGGTTTC CCC GGAATCCTCCCA TTTCAAATCCCTCCC TERM 2785 2142831 - 2142855 + F 82 -12.9 -2.76492 | overlap 2142812 2142830 CCCTTCCGCCCGGAA GGGAGGGTTTC CCC GGAATCCTCCC ATTTCAAATCCCTCC TERM 2786 2143083 - 2143061 - g 85 -6.8 -4.87892 | opp_overlap 2143061, overlap 2143062 GTCGAACAAAAGAAA GCCGCCTACG CAG CGCTGGCGGA TGTGCTGGAGAACGA TERM 2787 2143082 - 2143062 - g 74 -10.3 -3.5165 | opp_overlap 2143061, overlap 2143061 TCGAACAAAAGAAAG CCGCCTACG CAG CGCTGGCGG ATGTGCTGGAGAACG TERM 2788 2143914 - 2143924 + G 74 -4.6 -4.75356 | TGAATCTCGCGGAAC GGTC GCT GGCC TTTTTCAGTCTGTTT TERM 2789 2143962 - 2143981 + G 73 -9.2 -3.85254 | overlap 2143952 2143961 CCTTCGCGCTGGTGT GGCACTGG CTGG CCAGCGCC TATTTTATCGTGCTG TERM 2790 2144544 - 2144573 + G 71 -7.7 -3.95986 | ACATTGCCCCCTTAC TGGCCGGCGCCGG GGCG CTGGGGCTGGCGA TTTCGTTCGGTTCGC CKO_02315 2142923 - 2145157 + | hypothetical protein CKO_02316 2146080 - 2145154 - | putative SAM-dependent methyltransferase CKO_02317 2146290 - 2146093 - | hypothetical protein TERM 2791 2146557 - 2146541 - g 75 -3.6 -4.86033 | opp_overlap 2146555, overlap 2146553 AAACTGGCAGAAAAA GCGCGT GAACA AGGCGC CAAAGGTTTTGTCGT CKO_02318 2146367 - 2146627 + | hypothetical protein TERM 2792 2146643 - 2146663 + TF 90 -9.8 -4.42238 | opp_overlap 2146643 CCCCCTACCAGGTAA CTGCATTC CCACC GAATGCAG TTTTCCTTAGCATGG TERM 2793 2146663 - 2146643 - Tf 70 -9.8 -3.09516 | opp_overlap 2146643 CCCCCTACCAGGTAA CTGCATTC CCACC GAATGCAG TTTTCCTTAGCATGG CKO_02320 2146915 - 2146670 - | hypothetical protein CKO_02319 2146820 - 2147086 + | hypothetical protein TERM 2794 2147077 - 2147087 + FH 73 -4 -4.90778 | ATCGAAAGATAGCCA GTTA CGC TAAC TTTTCTTTACGTAAA CKO_02321 2147374 - 2147634 + | hypothetical protein TERM 2795 2147717 - 2147738 + T 100 -13.7 -6.11644 | GTGTTACCCTTGTTC GCCCGTCCG CCAC TGGACGGGC TTTTTTTTTGCCTGA CKO_02322 2148725 - 2147757 - | hypothetical protein TERM 2796 2148103 - 2148087 - G 86 -6.5 -5.0133 | GATGTCGGCAAAAAA TTTCGCG ACG CGCGGAA CGTACTCCGGGTGCG CKO_02323 2148976 - 2149515 + | hypothetical protein TERM 2797 2149531 - 2149560 + F 100 -13.8 -4.73613 | opp_overlap 2149533 2149535 TATTATCCATCCGAA GATATTAGCCCT TTCTTC AGGGCTAATATC TTTTATTCATGCTGA TERM 2798 2149558 - 2149533 - f 73 -10.6 -3.06492 | opp_overlap 2149531, overlap 2149535 TTATCCATCCGAAGA TATTAGCCCT TTCTTC AGGGCTAATA TCTTTTATTCATGCT CKO_02324 2149585 - 2150259 + | hypothetical protein TERM 2799 2150455 - 2150444 - g 90 -5.8 -5.21709 | opp_overlap 2150444 CCCGACAGGAAAAAA CCGA TTTA TCGG TATATGAAAAAGGTC CKO_02325 2150290 - 2151018 + | hypothetical protein TERM 2800 2151800 - 2151823 + G 70 -6.6 -4.15006 | opp_overlap 2151802 AGCCACTGTCGATCA GACGCTCGGC GAGA GCTGGGGGTC TTTTACGCTGAGTCT TERM 2801 2152529 - 2152549 + G 86 -10.4 -4.07687 | gap 1, opp_overlap 2152502 2152498, overlap 2152529 AGTGACCCCAACGCG C-GGCGCGG TAGT CCGCGCCAG TTTTAACACCCGCGT CKO_02326 2151015 - 2152820 + | hypothetical protein CKO_02327 2152843 - 2153832 + | hypothetical protein CKO_02328 2153829 - 2154341 + | hypothetical protein CKO_02329 2156505 - 2154328 - | ATP-dependent DNA helicase DinG TERM 2802 2154374 - 2154399 + g 100 -12.6 -5.47218 | CGGATGCTTTTTTTA CGCCCGGCAA CCACTT TTGTCGGGCG TTTTTTTACCTCCGG TERM 2803 2156250 - 2156273 + g 100 -8.8 -5.64873 | GATCCTGCAACGCCA CGTTGGCGGT GCTC ACCACCAGCG TTTTTTGTTCTTCGC TERM 2804 2156595 - 2156576 - R 100 -12.8 -5.26119 | GTCGCAAAAAGAAAA GCCCGACC TTTC GGCCGGGC TCGCAATTAATCCGC CKO_02330 2157966 - 2156602 - | ATP-dependent RNA helicase RhlE TERM 2805 2156666 - 2156676 + g 71 -8.2 -3.84451 | CCTGGCTTACCTTCT CCGC TGC GCGG TTTGGCTTTCGGCGC TERM 2806 2157421 - 2157438 + g 70 -6.9 -4.07568 | GGAGAACAGCAGGTT CTGGCGC TTCG GCGGCAG TTTTGCCAGCACGCG TERM 2807 2157600 - 2157563 - G 74 -9.7 -3.73775 | opp_overlap 2157593 2157597 TCCAGGTCGAGCAAA CGCCCCGGCGTTGCCAC CAGC ACGTCAACGCCGCCGCG CAGTTTCATCATCTG TERM 2808 2158182 - 2158159 - H 73 -9.8 -3.30619 | opp_overlap 2158158 AATTATCGGTCATAA TCTTAATCAA TCGA TTGATTAAGA ATTAGGTTGCGCGAT CKO_02331 2158196 - 2158873 + | putative DNA-binding transcriptional regulator CKO_02332 2158870 - 2159865 + | hypothetical protein TERM 2809 2159937 - 2159918 - g 72 -3.5 -4.74103 | gap 1, overlap 2159919 GCCGGAATGGAAAAA CCG-GCGG TCGCC CCGCTCGA CTGTACGATCCACGC TERM 2810 2160681 - 2160671 - g 74 -2.4 -5.03314 | CTGATCCTGAAAAAA GAGG CTA CCGC AGAGGATATCCGCCG TERM 2811 2160889 - 2160872 - g 78 -2.5 -5.18357 | overlap 2160864 2160873 2160874 GAACTGACCAAAAAA TTCGGCG ACTT CGCCGCC ACCGACCACGTTAAC TERM 2812 2161194 - 2161179 - g 89 -3.2 -5.46698 | overlap 2161182 2161183 CGCAAAACGAAAAAA TCACCC GCAT GAGCGA AGCCTTCGGCCTGAA CKO_02333 2159858 - 2161594 + | hypothetical protein CKO_02334 2161587 - 2162720 + | hypothetical protein TERM 2813 2162742 - 2162787 + F 72 -9.2 -3.53444 | gap 1, opp_overlap 2162784 TGCCTGATGGCGCTT CG-CTTATCAGGCCTACGA CCACATATT TTGTAGGCCGGATAAGGCG TTTACGCCGCCATCC CKO_02335 2162826 - 2163932 + | hypothetical protein CKO_02336 2164250 - 2163894 - | hypothetical protein TERM 2814 2164295 - 2164307 + H 76 -4.8 -4.91109 | CACGAACACGTTGTT GCCA CCTCA TGGC TTTTTCTCCTGAAGG CKO_02337 2164438 - 2165199 + | hypothetical protein TERM 2815 2165764 - 2165753 - g 83 -7.2 -4.63218 | opp_overlap 2165761, overlap 2165760 2165761 TCGCGCCGAAGAAAA CCGG AAAC CCGG CGAAGCGCAGGTGCT CKO_02338 2165196 - 2166437 + | cardiolipin synthase 2 TERM 2816 2166848 - 2166869 + G 70 -3.1 -4.74103 | gap 1, overlap 2166839 2166852 ACCAACTGGCTGGGC TATATTCTGC TGG GCGGAAT-TA TTTTTACCTTCGGCG TERM 2817 2166852 - 2166866 + G 73 -6.4 -4.47888 | overlap 2166848 ACTGGCTGGGCTATA TTCTGC TGG GCGGAA TTATTTTTACCTTCG CKO_02339 2166437 - 2167399 + | hypothetical protein CKO_02340 2168218 - 2167469 - | hypothetical protein TERM 2818 2168218 - 2168193 - G 100 -12.7 -4.25283 | opp_overlap 2168192 2168193, overlap 2168211 ATCTCCTGATTAAAA GTGATACCCCT GAAT AAGGGTATCAC ATTCTGCTACCAGCG CKO_02341 2168677 - 2168225 - | molybdopterin synthase large subunit CKO_02342 2168924 - 2168679 - | molybdopterin synthase small subunit TERM 2819 2168771 - 2168743 - G 80 -8.8 -4.11394 | opp_overlap 2168765 AGCGGATGTTCAAAA CTGACCAGCGTC TGATT GACGGCGGCCAG CAGCTTGCCGTCTTC CKO_02343 2169402 - 2168917 - | molybdenum cofactor biosynthesis protein C CKO_02344 2169917 - 2169405 - | hypothetical protein CKO_02345 2170964 - 2169942 - | molybdenum cofactor biosynthesis protein A TERM 2820 2170257 - 2170226 - G 95 -6.4 -5.32882 | gap 1, opp_overlap 2170227 2170243, overlap 2170227 CAGGATGACAAAAAA CCTGCGCC-GGGCCG TCG CTGCGCTGGCGCAGT TGATGAATCCAACCG TERM 2821 2170256 - 2170227 - G 76 -9.9 -3.78644 | gap 1, opp_overlap 2170227 2170243, overlap 2170226 AGGATGACAAAAAAC CTGCGCC-GGGCCG TCG CTGCGCTGGCGCAG TTGATGAATCCAACC TERM 2822 2170227 - 2170256 + g 78 -12.1 -3.18264 | gap 1, opp_overlap 2170226 2170227, overlap 2170243 AGGATGACAAAAAAC CTGCGCCGG-GCCG TCG CTGCGCTGGCGCAG TTGATGAATCCAACC TERM 2823 2170583 - 2170539 - G 81 -12.1 -3.55622 | opp_overlap 2170559 GGTAATGGCGTGAAA CTGACGGGCGTCAAGGCTATC GAC GCTGACGTTGATGCCCGTCAG ACCCGCGTCGCGCCA TERM 2824 2171054 - 2171078 + H 74 -10.9 -2.83271 | overlap 2171051 GTAGAGGCTAGAGTG TCTTTTTAAGC ATC GCTTAAAAAGG TGGTTATGCCGATAC TERM 2825 2171310 - 2171328 + H 70 -9.6 -3.05727 | opp_overlap 2171303 2171302, overlap 2171303 CTGAAAAGGCGCTAT TTGCGCTA CTG TAGCGCAG TATCTCTGATATTAG CKO_02346 2171538 - 2172260 + | hypothetical protein CKO_02347 2172271 - 2172396 + | hypothetical protein CKO_02348 2174384 - 2172363 - | excinuclease ABC subunit B TERM 2826 2173625 - 2173645 + g 70 -6.7 -4.14739 | CCTGTACGATGCGCT CGCGCGGCG TAA CGTAGTGCG TTTTCGGGTAGATGG CKO_02349 2174753 - 2174905 + | hypothetical protein CKO_02350 2175638 - 2174952 - | dithiobiotin synthetase CKO_02351 2176386 - 2175631 - | biotin biosynthesis protein BioC TERM 2827 2175673 - 2175660 - G 95 -6.7 -5.42259 | TGACTCCCAAAAAAA GCTGA TACG TCAGC GGATATTTCCCCTGC CKO_02352 2177527 - 2176373 - | 8-amino-7-oxononanoate synthase TERM 2828 2177504 - 2177484 - G 75 -11.1 -3.3164 | opp_overlap 2177484 2177484, overlap 2177433 2177471 AACGCATCGGCAGAA CGACGCGCC GTA AGCGCATCG TCGATTTTTTGCTGC CKO_02353 2178564 - 2177524 - | hypothetical protein TERM 2829 2177569 - 2177589 + g 75 -11.1 -3.43218 | overlap 2177563 TGTATCCGGGGTCAT CAGCGCCTG TTC CAGACGCTG TTGCTGTTCGTTGTC CKO_02354 2178651 - 2179940 + | adenosylmethionine--8-amino-7-oxononanoate transaminase CKO_02355 2180006 - 2180482 + | putative kinase inhibitor protein TERM 2830 2180567 - 2180513 - T 86 -12.1 -3.60296 | gap 1, opp_overlap 2180504 2180555, overlap 2180514 GATGGCGACGCTAAA GCGTCTTATCCGGCCTGCGGCACCTG ACAT CCAGCGCCGTAGGTCGGATAAG-CGT CAGCGCCATCCGGCA TERM 2831 2180566 - 2180514 - T 93 -15.6 -2.75963 | gap 1, opp_overlap 2180504 2180555, overlap 2180513 ATGGCGACGCTAAAG CGTCTTATCCGGCCTGCGGCACCTG ACAT CCAGCGCCGTAGGTCGGATAAG-CG TCAGCGCCATCCGGC CKO_02356 2182108 - 2180588 - | histidine ammonia-lyase CKO_02357 2183795 - 2182110 - | urocanate hydratase TERM 2832 2182795 - 2182783 - G 74 -4.8 -4.70319 | CCAGGAAAATCAAAA GCGT TCTCT ACGC CCATCTCTTTCGCCA CKO_02358 2184654 - 2183935 - | hypothetical protein TERM 2833 2184222 - 2184241 + g 71 -6.4 -4.30576 | overlap 2184225 TCACACAGCGATCCT CAATCTGC ACCG GCAGATCG TTTTCATAGTGCACC TERM 2834 2184292 - 2184273 - G 72 -2 -4.88407 | overlap 2184276 TCACCGAATGAAAAA TCAGCGTG CCTT CACGCACA TTCAGGGCCGTGGCC CKO_02359 2185684 - 2184743 - | formimidoylglutamase CKO_02360 2186913 - 2185681 - | imidazolonepropionase TERM 2835 2186039 - 2186029 - G 77 -4.6 -4.93877 | TTTGAGGAAATAAAA CGCC CCC GGCA GCAGAACGCCCACGG TERM 2836 2186380 - 2186404 + g 74 -6.5 -4.25104 | gap 1, overlap 2186347 CGCATGTGCCGCCAG CAGGGTAGGA CTGATT TCC-ACCCTG TTTTCATGCGCCAGC CKO_02361 2186982 - 2187113 + | hypothetical protein CKO_02362 2187136 - 2188419 + | putative pectinesterase TERM 2837 2188491 - 2188457 - T 100 -20.2 -3.88029 | opp_overlap 2188462, overlap 2188462 AGGCCAGATAAAAGA GAAAAGGTCGTCACGC CGG GCGTGACGACCTTTTT TTACATCTGACGGTT TERM 2838 2188486 - 2188462 - T 100 -20.1 -4.95843 | opp_overlap 2188462, overlap 2188457 AGATAAAAGAGAAAA GGTCGTCACGC CGG GCGTGACGACC TTTTTTTACATCTGA TERM 2839 2188462 - 2188486 + T 100 -20.1 -5.50499 | opp_overlap 2188457 2188462 AGATAAAAGAGAAAA GGTCGTCACGC CGG GCGTGACGACC TTTTTTTACATCTGA CKO_02363 2190750 - 2188492 - | hypothetical protein TERM 2840 2190631 - 2190648 + g 85 -4.9 -5.17576 | gap 1, opp_overlap 2190631 2190634, overlap 2190631 2190634 ATGAGACGCAAGAAT GG-ACCAT GCT ATGGTGCC TTTTTTGGCTTCCTC CKO_02364 2192268 - 2190835 - | hypothetical protein TERM 2841 2191175 - 2191161 - G 72 -3.5 -4.72497 | TACTCAGGAACAAAA TGACG AAGAA CGCCA CGTTACCATGATTAT CKO_02366 2193408 - 2192353 - | hypothetical protein CKO_02365 2192272 - 2192421 + | hypothetical protein TERM 2842 2192935 - 2192923 - Gf 74 -5.5 -4.58663 | AGCAGCGTTCAAAAA CGTGA GTG CCACG GGCGCGGCCGTTCCC TERM 2843 2193444 - 2193431 - fH 77 -3.9 -5.26875 | CCCTCAATTAAAAAA CATTA GCGT TAATG AGGACATGGTTGCAC TERM 2844 2194441 - 2194460 + G 84 -2.8 -5.43414 | gap 1, overlap 2194443 2194453 CGCAAAGACGCCATT CTCTCT-CC TCC GGCAGAGCG TTTTTTCTCTCTGCT TERM 2845 2194453 - 2194474 + G 71 -5.8 -4.26188 | overlap 2194443 2194441 ATTCTCTCTCCTCCG GCAGAGCG TTTTTT CTCTCTGC TTTTGAATGTCTGGG CKO_02367 2193442 - 2194545 + | hypothetical protein CKO_02368 2195722 - 2194604 - | 6-phosphogluconolactonase CKO_02369 2195763 - 2196581 + | phosphotransferase CKO_02370 2197640 - 2196582 - | molybdate transporter ATP-binding protein CKO_02371 2198332 - 2197643 - | molybdate ABC transporter permease protein TERM 2846 2198080 - 2198025 - G 76 -10.4 -3.68244 | gap 1 ACCATTAACGGGAAA GACATCACCGCCGCCGCCAGCACGGCG CCT CGCCA-GCTAAAGGCAAAGGTAATGCC GAACCAGTCATAAAG CKO_02372 2199105 - 2198332 - | molybdate transporter periplasmic protein TERM 2847 2198600 - 2198628 + g 78 -6.5 -4.58283 | overlap 2198601 TCCGCAGGAGCCAGT TTCGGCGCCAGGG TAT CCCATGCGCCCAG TTTTTGCAGCGCTTC TERM 2848 2198810 - 2198823 + g 90 -4.5 -5.36441 | AGCGTTTCACGCGTT GCGGT ATCA ATCGC TTTTTTGTCTACCGC TERM 2849 2199342 - 2199315 - R 71 -9.9 -3.1314 | opp_overlap 2199320, overlap 2199320 GAAAGTCGAAGAAAG TAAAACGCCCG ACTGAG CGGGCGTTTAA AAATCAATGGTTCTG TERM 2850 2199337 - 2199320 - R 93 -9.8 -4.67942 | opp_overlap 2199320, overlap 2199315 TCGAAGAAAGTAAAA CGCCCG ACTGAG CGGGCG TTTAAAAATCAATGG TERM 2851 2199320 - 2199337 + r 75 -9.8 -3.57792 | opp_overlap 2199315 2199320 TCGAAGAAAGTAAAA CGCCCG ACTGAG CGGGCG TTTAAAAATCAATGG CKO_02373 2199597 - 2199346 - | hypothetical protein TERM 2852 2199946 - 2199918 - g 78 -6 -4.76041 | overlap 2199920 CAGATTCAGCAAAAA GCGTTCGACGT-GC TGA GCGACGACGA-CGC CCTGCCGCTCGACAG CKO_02374 2199624 - 2200412 + | DNA-binding transcriptional regulator ModE TERM 2853 2200821 - 2200845 + G 76 -9.9 -3.77136 | overlap 2200827 GGTGAGCGATCCCGC CCGCTGTGCCG AAC TGGCGCAGCAG TTTGGCATTTCTTCT TERM 2854 2200827 - 2200852 + G 88 -9.8 -4.41114 | overlap 2200821 CGATCCCGCCCGCTG TGCCGAACTG GCGCAG CAGTTTGGCA TTTCTTCTCTGCTCG CKO_02375 2200468 - 2201952 + | putative molybdenum transport ATP-binding protein ModF TERM 2855 2201963 - 2201982 + F 100 -15 -5.13521 | GTTAGCGGTTCACTG GGGGCGTG CGGC CACGCCCC TTTTTTCACTGCTTT TERM 2856 2202718 - 2202666 - g 95 -10.5 -4.60041 | gap 1, opp_overlap 2202666, overlap 2202646 ACCGACCTGCAAAAA GCGCAG-CCGGACTGGAGCATCGC CCTGCT GCGCTACTTCAACCCGGTCGGCGC GCATCCGTCAGGTGA CKO_02376 2202129 - 2203187 + | UDP-galactose-4-epimerase TERM 2857 2203305 - 2203286 - g 81 -12.1 -3.55563 | ACCGCATCGCGCAAA GCGCCCC TGGCAG GGGGCGC AGGAAACGCCATCTC TERM 2858 2203503 - 2203518 + G 72 -11.8 -2.76909 | overlap 2203500 2203498 2203494 2203496 CGTTGCCAGAGCGCC CGCGGC ACCA GCCGCG TGATCTGCTTTTCTC TERM 2859 2203633 - 2203644 + G 75 -5.8 -4.59773 | opp_overlap 2203627 TGGGAAAAACCTACC CCTG GGTG CAGG TTTTTGAGAATAAAG CKO_02377 2203197 - 2204243 + | galactose-1-phosphate uridylyltransferase CKO_02378 2204247 - 2205395 + | galactokinase CKO_02379 2205389 - 2206429 + | aldose 1-epimerase TERM 2860 2206472 - 2206443 - T 90 -13.6 -3.38272 | opp_overlap 2206430 2206429 GACGATGAGCCATAA CAGGCCCGATGG TGCCAG CTATCGGGCCTG TGGCGCGTCGCTTTG CKO_02380 2206629 - 2206504 - | hypothetical protein TERM 2861 2206961 - 2206951 - g 77 -8.2 -4.1552 | CAGGGTCTGAACAAA GCGG AAA CCGC TGAAAAATACGGTGA CKO_02381 2206651 - 2207403 + | hypothetical protein CKO_02382 2208282 - 2207506 - | hypothetical protein CKO_02383 2209361 - 2208279 - | hypothetical protein CKO_02384 2210344 - 2209358 - | hypothetical protein CKO_02385 2212524 - 2210356 - | hypothetical protein TERM 2862 2210505 - 2210519 + g 71 -6.4 -4.33274 | CCACGCGGAAGGTGG TCGGCA CGC TGCTGA TTTTCGTGGTGTAGC TERM 2863 2212059 - 2212030 - G 86 -10 -4.26881 | gap 1 GGCGACAAAATTAAA CTGTCCGG-CCGG ACTTG CCGGGCCGTACAG CGCGCCGGTCAGGCT TERM 2864 2212504 - 2212490 - G 70 -10 -3.38112 | opp_overlap 2212488, overlap 2212488 AGGGAAATGAGAAGA GGCAAC AGC GTTGCC AGTTGAGTGGGCTTA TERM 2865 2212672 - 2212656 - R 93 -6.5 -5.67063 | opp_overlap 2212656 GTTAGTAGAAAAAAA CCGGC CTGATTT GCCGG TTTTTCAATTGCGCA TERM 2866 2212656 - 2212672 + r 80 -6.5 -4.74103 | opp_overlap 2212656 GTTAGTAGAAAAAAA CCGGC CTGATTT GCCGG TTTTTCAATTGCGCA CKO_02386 2213760 - 2212708 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2867 2213184 - 2213200 + g 78 -6.5 -4.56597 | overlap 2213155 CAATCGCTACTTTGA TGGTGCC GTC GGTGCCA TTTTTAAAGCCGACC TERM 2868 2213457 - 2213469 + g 78 -6.9 -4.59773 | overlap 2213452 GCCCTTTCCAGCCCA CCGTG GTG CGCGG TTTTTCAAAATAGAC TERM 2869 2213849 - 2213830 - H 72 -5.1 -4.56597 | CTCTTTGGCTAAAAA GTGTAAA CTGACT TTTACAC TTCGAACGGACTAAT TERM 2870 2213899 - 2213885 - H 100 -3.5 -5.89827 | AATTAGGAAAAAAAA CGCCA GAAAG TAGCG AAAAACGAGATCTAA CKO_02387 2214076 - 2214450 + | hypothetical protein TERM 2871 2214474 - 2214491 + F 100 -11.3 -5.54907 | opp_overlap 2214472 AAAGGCCAGGTAACG GGAGAGC TGAC GCTCTCC TTTTTATTTTGTCAG TERM 2872 2215484 - 2215449 - g 100 -17.6 -3.0263 | gap 1 ATCAGCCGTGCAACA GGCCGGACTGCCACCTG AAT CAGG-GGCTATCCGGCC ATTCGCATCATCACC CKO_02388 2214656 - 2215504 + | zinc transporter ZitB TERM 2873 2215510 - 2215540 + T 79 -11.8 -3.15544 | opp_overlap 2215512, overlap 2215512 TCACCACTAACTGGA AAGCGCGTGTGAGC CTC GTTCGCGCGCGCTG TTGATCCACATCCGG TERM 2874 2215512 - 2215538 + T 90 -14.4 -3.14051 | opp_overlap 2215512, overlap 2215510 ACCACTAACTGGAAA GCGCGTGTGAGC CTC GTTCGCGCGCGC TGTTGATCCACATCC CKO_02389 2216220 - 2215501 - | hypothetical protein CKO_02390 2217291 - 2216245 - | quinolinate synthetase CKO_02391 2217666 - 2217373 - | hypothetical protein TERM 2875 2217552 - 2217584 + g 100 -17.1 -3.19463 | opp_overlap 2217542 2217560, overlap 2217553 2217560 ACAAATTCTGCGCAT AGCAAAAAGGCGCCT TTA GGGCGCCTTTTTGCA TTGGTGGGTCGTGCA TERM 2876 2217553 - 2217583 + g 100 -20.6 -2.51464 | opp_overlap 2217542 2217560, overlap 2217552 2217560 CAAATTCTGCGCATA GCAAAAAGGCGCCT TTA GGGCGCCTTTTTGC ATTGGTGGGTCGTGC TERM 2877 2217576 - 2217560 - G 100 -10.8 -4.8048 | opp_overlap 2217560 2217553 2217552 TGCGCATAGCAAAAA GGCGCC TTTAG GGCGCC TTTTTGCATTGGTGG TERM 2878 2217560 - 2217576 + g 100 -11.5 -4.7629 | opp_overlap 2217560, overlap 2217553 2217552 TGCGCATAGCAAAAA GGCGCCT TTA GGGCGCC TTTTTGCATTGGTGG TERM 2879 2217839 - 2217854 + r 72 -9 -3.52539 | overlap 2217827 2217845 CCTCGCCCTTCGGGC CGTTGC TGAC GCAACG TTATCCTTCACGTTC TERM 2880 2218060 - 2218075 + r 72 -9 -3.51597 | overlap 2218048 CCTCGCCCTTCGGGC CGTTGC TGAT GCAACG TTATCCTTCACGCTT TERM 2881 2218497 - 2218545 + r 73 -10.5 -3.07994 | gap 1, opp_overlap 2218497 2218520, overlap 2218500 2218505 TCAACTGCTTAGGAA T-CGCACGACGAGACCAGAAAT AACGCG ATTTCTGGTCGCGTGGTGTGCA TTACATCGCGTTAAG TERM 2882 2218544 - 2218497 - R 71 -9.9 -3.15579 | opp_overlap 2218497 2218500 2218505, overlap 2218520 TCAACTGCTTAGGAA TCGCACGACGAGACCAGAAAT AACGCG ATTTCTGGTCGCGTGGTGTGC ATTACATCGCGTTAA TERM 2883 2218500 - 2218541 + r 86 -14.6 -2.55015 | opp_overlap 2218497 2218520, overlap 2218497 2218505 ACTGCTTAGGAATCG CACGACGAGACCAGAAAT AACGCG ATTTCTGGTCGCGTGGTG TGCATTACATCGCGT TERM 2884 2218505 - 2218536 + r 76 -11.7 -2.66912 | opp_overlap 2218497 2218520, overlap 2218500 2218497 TTAGGAATCGCACGA CGAGACCAGAAAT AACGCG ATTTCTGGTCGCG TGGTGTGCATTACAT CKO_02398 2219334 - 2218546 - | hypothetical protein TERM 2885 2219280 - 2219264 - G 100 -15.1 -4.25104 | GGCGCCTGAGCAAAA GCGGCCC AGG GGGCCGC TATGCCAACCAGTAA CKO_02399 2219862 - 2219344 - | peptidoglycan-associated outer membrane lipoprotein CKO_02400 2221192 - 2219897 - | translocation protein TolB TERM 2886 2221292 - 2221315 + r 93 -12.5 -3.77241 | ACTCCCGTAGCGTTT CTTTCCCCG CCGTGA CGGGGAAAG TTTAGCTTACGGTTT CKO_02401 2221696 - 2221322 - | hypothetical protein TERM 2887 2221731 - 2221759 + r 71 -7.3 -4.03234 | overlap 2221716 2221732 GCGGCAGCGGCTTTT TCGGCTGCGGC TTTCTTC GCAGCAGCCGC TTTATCTGCCGCAGC TERM 2888 2221732 - 2221758 + r 73 -10.8 -3.01726 | overlap 2221716 2221731 CGGCAGCGGCTTTTT CGGCTGCGGC TTTCTTC GCAGCAGCCG CTTTATCTGCCGCAG TERM 2889 2221819 - 2221841 + r 95 -12.7 -3.85698 | overlap 2221798 2221800 2221819 CAGCTTTTTTTGTCT GCTGCCGCT TTCTC AGCGGCGGC TTTGTCGGCGGCAGC TERM 2890 2221819 - 2221856 + r 79 -7.5 -4.38927 | overlap 2221798 2221800 2221819 2221847 2221849 CAGCTTTTTTTGTCT GCTGCCGCTTTCTCAGC GGCG GCTTTGTCGGCGGCAGC TTTCTTCTCTGCGGC CKO_02402 2222549 - 2221797 - | hypothetical protein TERM 2891 2221849 - 2221874 + g 71 -4.6 -4.56597 | overlap 2221819 2221847 2221865 2221867 2221869 GCGGCGGCTTTGTCG GCGGCAGC TTTCTTCTCT GCGGCCGC TTTTTCAGCAGCAGC TERM 2892 2221942 - 2221952 + g 85 -2.4 -5.46657 | GCCTGCTTAGCCGCC TCGG CTT CCGC TTTTTTCTTCGCGTC TERM 2893 2222101 - 2222120 + g 76 -10.6 -3.65603 | overlap 2222093 2222098 TTCGCTTTCGCATCC GCTGCGGC TTTC GCCGCCGC TTCTTCAGCCTGTTT CKO_02403 2223041 - 2222613 - | colicin uptake protein TolR CKO_02404 2223728 - 2223045 - | colicin uptake protein TolQ CKO_02405 2224132 - 2223734 - | acyl-CoA thioester hydrolase YbgC TERM 2894 2224089 - 2224050 - G 74 -4.8 -4.82901 | opp_overlap 2224050, overlap 2224051 GCTCTTTCATAAAAA GCGACGTAACTGGCGTGG TAAA CCACACCACCGGCGTCGG TATCCTCATAATAGA TERM 2895 2224236 - 2224261 + r 82 -7.7 -4.60889 | opp_overlap 2224236 AAGGGAGAGTAAAAA TTTATGGGCTT ATGA AAACCCATAAA TTTTTAAGGATACTT TERM 2896 2224261 - 2224236 - R 100 -9.9 -4.82154 | opp_overlap 2224236 AAGGGAGAGTAAAAA TTTATGGGCTT ATGA AAACCCATAAA TTTTTAAGGATACTT CKO_02406 2224575 - 2224282 - | hypothetical protein TERM 2897 2224540 - 2224513 - G 90 -12.1 -3.97834 | gap 1, opp_overlap 2224518, overlap 2224518 TAACGCCAGCATAAA GGA-AAGCGCCC GTAAT GGGCGCTTATCC ATTACCGCATACAAC TERM 2898 2224534 - 2224518 - G 86 -10.8 -4.16182 | opp_overlap 2224518, overlap 2224513 CCAGCATAAAGGAAA GCGCCC GTAAT GGGCGC TTATCCATTACCGCA TERM 2899 2224518 - 2224534 + g 75 -11.5 -3.41878 | opp_overlap 2224513 2224518 CCAGCATAAAGGAAA GCGCCCG TAA TGGGCGC TTATCCATTACCGCA CKO_02408 2224688 - 2224575 - | hypothetical protein CKO_02409 2225842 - 2224703 - | hypothetical protein CKO_02410 2227429 - 2225858 - | hypothetical protein CKO_02407 2224643 - 2225953 + | hypothetical protein TERM 2900 2226566 - 2226577 + gF 78 -5.8 -4.7261 | opp_overlap 2226565 CAGCGCGTAAGGGAT CTGG ATAG CCAG TTTGTTTTCCTGCGT CKO_02411 2227509 - 2227634 + | hypothetical protein TERM 2901 2228064 - 2228096 + G 76 -9.4 -4.06491 | gap 2, opp_overlap 2228067 2228071, overlap 2228066 2228067 2228071 TTATTATTCCGTTAA CA-A-TAAAGCCACGC TAA GCGTGGCTTTAATCTG TTTGTCTGAGATTCA TERM 2902 2228066 - 2228092 + G 88 -13.8 -3.38294 | opp_overlap 2228067 2228071, overlap 2228064 2228067 2228071 ATTATTCCGTTAACA ATAAAGCCACGC TAA GCGTGGCTTTAA TCTGTTTGTCTGAGA TERM 2903 2228091 - 2228067 - g 100 -17.3 -3.62046 | opp_overlap 2228067 2228066 2228064 2228071, overlap 2228071 TTATTCCGTTAACAA TAAAGCCACGC TAA GCGTGGCTTTA ATCTGTTTGTCTGAG TERM 2904 2228067 - 2228091 + G 90 -17.3 -2.62495 | opp_overlap 2228067 2228071, overlap 2228066 2228064 2228071 TTATTCCGTTAACAA TAAAGCCACGC TAA GCGTGGCTTTA ATCTGTTTGTCTGAG TERM 2905 2228071 - 2228087 + G 100 -13.7 -3.98915 | opp_overlap 2228067 2228071, overlap 2228067 2228066 2228064 TCCGTTAACAATAAA GCCACGC TAA GCGTGGC TTTAATCTGTTTGTC TERM 2906 2228087 - 2228071 - g 100 -13.7 -4.44667 | opp_overlap 2228071 2228067 2228066 2228064, overlap 2228067 TCCGTTAACAATAAA GCCACGC TAA GCGTGGC TTTAATCTGTTTGTC CKO_02412 2227993 - 2228124 + | hypothetical protein CKO_02413 2230706 - 2228109 - | alpha-mannosidase TERM 2907 2230311 - 2230291 - G 74 -10.4 -3.61398 | TGGCGTTCCGAACAA CCACGCCA GAACA TGGCGCGG GTAATACCGAAACCG TERM 2908 2230451 - 2230471 + g 95 -14.1 -3.70902 | opp_overlap 2230460 GCACGATCGACTCCC CGGATACCA GCG TGGTATCCG TTTGGGTATACCACG CKO_02414 2232683 - 2230764 - | 2-O-a-mannosyl-D-glycerate specific PTS transporten components IIABC TERM 2909 2231221 - 2231192 - G 70 -7.1 -4.14739 | gap 1 TGACCGAGGCGAAAA TGGCATACGG-GCC GTA GACGCCGTTCGCCA TCGCCCCAAGGCAGA TERM 2910 2231239 - 2231249 + g 70 -6.8 -4.15044 | opp_overlap 2231238 2231239 GCCCCAAGGCAGAAC GCGT AAG ACGC TTTATTGACCGGCCC TERM 2911 2233280 - 2233263 - g 74 -3.3 -4.91873 | overlap 2233265 TACATTAAGCAAAAA CCCGTCG CCCT CGAAGAG ACGTGGATGCCGCTG CKO_02415 2232858 - 2233577 + | DNA-binding transcriptional repressor MngR CKO_02416 2234068 - 2234517 + | methylaspartate mutase subunit S TERM 2912 2234630 - 2234644 + G 90 -4.2 -5.42862 | opp_overlap 2234623 2234630 GCCAACCACCACATA CCATCT GGC AGACGG TTTTTTTGCCAGTCT TERM 2913 2234753 - 2234742 - g 74 -7.2 -4.11216 | TCCTCATCGGCAAAA GGCG GGCT CGCC GTCGCCGCTATGGGG TERM 2914 2235635 - 2235620 - g 93 -9 -4.72272 | CGCGGGCACCAAAAA GCAGGT CTGC ACCTGC GTGGGCAACGTCGAC CKO_02417 2234517 - 2235905 + | hypothetical protein CKO_02418 2235924 - 2237369 + | hypothetical protein CKO_02419 2237369 - 2238610 + | hypothetical protein CKO_02420 2238614 - 2239984 + | hypothetical protein CKO_02421 2239981 - 2240298 + | hypothetical protein TERM 2915 2240323 - 2240350 + TF 75 -6.4 -4.39133 | gap 1 TACAACAACAGCCAT CAG-GATACAGGA TTT TGCTGTATCACTG TTTTCCTGATTATTC CKO_02423 2240497 - 2240360 - | hypothetical protein CKO_02422 2240466 - 2241773 + | hypothetical protein TERM 2916 2242448 - 2242434 - g 77 -8.5 -4.15044 | opp_overlap 2242439 2242445 CTCTTCGTCAATAAA GGCGG CGGTT CCGCC AACAAAGCGGCGCTG TERM 2917 2242544 - 2242525 - g 76 -2.9 -5.08824 | gap 1, overlap 2242542 TCCTGATCGAAAAAA TGC-GTTC GCTGG GAACAGCA GCCTGCCCGCCCTAC TERM 2918 2243192 - 2243169 - g 78 -6.6 -4.61527 | gap 1, overlap 2243158 2243172 AAAACGCCGGAAAAA CAGGCC-TGCG GAT CGCTCGGCCCG ACCACCGGCGGGCGC CKO_02424 2241882 - 2243534 + | hypothetical protein TERM 2919 2243703 - 2243679 - g 73 -5 -4.564 | gap 2, overlap 2243683 AACGGTAAAGGAAAA TCGACGGCGGCC TTT GGC-ACCG-CGA CCCGCGCGGTCGGTC CKO_02425 2243544 - 2244146 + | cob(I)yrinic acid a,c-diamide adenosyltransferase CKO_02426 2244413 - 2244192 - | hypothetical protein CKO_02427 2245350 - 2244430 - | hypothetical protein CKO_02428 2245862 - 2245683 - | hypothetical protein TERM 2920 2245832 - 2245815 - G 100 -11.3 -5.85178 | AACAGGCAAAAAAAA GGTCACC AGAA GGTGACC AACCATGTCGAAAAC CKO_02429 2246797 - 2245928 - | succinyl-CoA synthetase subunit alpha CKO_02431 2247963 - 2246797 - | succinyl-CoA synthetase subunit beta TERM 2921 2246866 - 2246883 + gH 74 -2.5 -5.00616 | overlap 2246868 CGCTGCAATAATATT CAGGCCG CTGT CAGCCAG TTTTTTCGCGCCGAG TERM 2922 2246892 - 2246905 + gH 79 -9.5 -3.73068 | CAGCCAGTTTTTTCG CGCCG AGTT CGGCG TTGTTGCCTTCCAGA CKO_02432 2248043 - 2247960 - | hypothetical protein CKO_02430 2247939 - 2248079 + | hypothetical protein CKO_02433 2249313 - 2248093 - | dihydrolipoamide acetyltransferase CKO_02434 2252129 - 2249328 - | alpha-ketoglutarate decarboxylase TERM 2923 2250683 - 2250693 + g 79 -3.2 -5.1417 | CGTAGAGTTTACGCG GCGT CGG ATGC TTTTTGATTTTCTGG TERM 2924 2252245 - 2252284 + r 76 -8.8 -3.82097 | opp_overlap 2252245, overlap 2252201 2252241 2252238 CGGCTCGCGAAGGAA CCTTTAGAAACTGTCT AACCATCA GGGCAGTTTTTAAAGG TTTCCTGCATTTCAA CKO_02435 2253139 - 2252423 - | succinate dehydrogenase iron-sulfur subunit CKO_02436 2254921 - 2253155 - | succinate dehydrogenase flavoprotein subunit CKO_02437 2255268 - 2254921 - | succinate dehydrogenase cytochrome b556 small membrane subunit CKO_02438 2255666 - 2255262 - | succinate dehydrogenase cytochrome b556 large membrane subunit TERM 2925 2256032 - 2256018 - H 80 -7.2 -4.59293 | CAAACATTAAACAAA GTTGTT ACA AACAAC ACCAGAAAAGGCATA TERM 2926 2256884 - 2256868 - g 74 -7.9 -4.07568 | opp_overlap 2256867 GCCTGCTGTCCAAAA TGCCGAC AAT GGCGGCA ATGTGTTACAAGTAT CKO_02439 2256363 - 2257646 + | type II citrate synthase TERM 2927 2257654 - 2257677 + F 100 -11.7 -4.60258 | AGCGTTAATCATCCT GGCCATCGG GTAACA CCGGTGGCC TTTATTATTTACTGA TERM 2928 2258915 - 2258899 - g 74 -6.5 -4.2558 | opp_overlap 2258899, overlap 2258900 TACCCCTTATGAAAA CGTCCGC GTC GCGAACA TGGTGTGGAATGATG CKO_02440 2257877 - 2259619 + | hypothetical protein CKO_02441 2259606 - 2259890 + | hypothetical protein TERM 2929 2260287 - 2260275 - g 91 -7.7 -4.91511 | ACCCTATGATAAAAA CATCC TCA GGATG GGATAAGAATGAGTT CKO_02442 2259887 - 2260357 + | hypothetical protein CKO_02443 2260419 - 2260712 + | hypothetical protein CKO_02444 2260717 - 2261244 + | hypothetical protein TERM 2930 2261890 - 2261907 + G 76 -9.9 -3.85698 | CTGGTGGCGTTTATG CAGTACC TGCG GGTACTG TTTGTCGCAGGCGCC TERM 2931 2262456 - 2262473 + G 80 -5.5 -4.87803 | CAGCATTTTGTTGAC CGGGC CTGCGGTT GCCCG TTTTATTTCAACCTA CKO_02445 2261464 - 2262513 + | hypothetical protein CKO_02446 2263310 - 2262519 - | hypothetical protein TERM 2932 2262966 - 2262990 + g 74 -9.9 -3.65224 | opp_overlap 2262966 AGGTTCAAGCCAGAA GTCGCTCTCGC CCA GCGGGAACGGC TTGTTAAACTCCGCT TERM 2933 2263154 - 2263138 - G 82 -5 -5.00884 | opp_overlap 2263141 AGTCGTTGTAAAAAA CGCTCG CTGGC CGTGCG ATACTGTGTGCGTGG TERM 2934 2263181 - 2263193 + g 93 -4.8 -5.48213 | opp_overlap 2263181 GTGGCGCAAAATAAA CCGT CGTAA ACGG TTTTTCTTTTGCCTG TERM 2935 2263193 - 2263181 - G 73 -5.5 -4.64861 | opp_overlap 2263181 GTGGCGCAAAATAAA CCGTC GTA AACGG TTTTTCTTTTGCCTG TERM 2936 2263385 - 2263341 - R 72 -5.2 -4.70534 | gap 1, opp_overlap 2263349, overlap 2263332 2263342 GAAACAGAGATAAAA TCTCCCCCTGCTAACTGAATA GCAT TATT-ATTTAACAGGAGGAGT GGGATATTACCAGTA CKO_02447 2264582 - 2263392 - | hypothetical protein CKO_02448 2265869 - 2264604 - | hypothetical protein TERM 2937 2265406 - 2265393 - G 77 -8.1 -4.13728 | overlap 2265394 GAGATAGCCGGAAAA CGACG ACGC CGTCG CCCAGCCCAGCGCCG TERM 2938 2265610 - 2265594 - G 71 -5.7 -4.24948 | GCACCAGATGTAAAA CGGCGCC ATC AGTGCCG AAACAATACAGACAA TERM 2939 2265714 - 2265701 - G 75 -5.9 -4.64598 | opp_overlap 2265710, overlap 2265702 TAATCACCGCAAAAA CGCCG TTAA CGGCA AACACCGTGCCGATT CKO_02449 2267692 - 2265893 - | hypothetical protein TERM 2940 2267543 - 2267561 + g 72 -11.7 -2.62515 | opp_overlap 2267535 AGAGAAACCCTCCAT TCCGGCG ACATC CGCCGGA TAGTGTGCAGACGTT CKO_02450 2267868 - 2268716 + | hypothetical protein CKO_02451 2269575 - 2268784 - | endonuclease VIII CKO_02452 2270234 - 2269590 - | pyrrolidone-carboxylate peptidase CKO_02453 2271239 - 2270244 - | hypothetical protein TERM 2941 2271152 - 2271132 - G 71 -8.2 -3.79678 | opp_overlap 2271127 2271133, overlap 2271133 AACGCCCCAGAATAA CCCCGTCG TCAGG CGACGCGG GTTGGCTTTGTCCTG CKO_02454 2271961 - 2271236 - | hypothetical protein CKO_02455 2272775 - 2272041 - | hypothetical protein CKO_02456 2273697 - 2272765 - | hypothetical protein CKO_02457 2274308 - 2273691 - | hypothetical protein CKO_02458 2275134 - 2274373 - | putative hydrolase-oxidase TERM 2942 2275621 - 2275631 + G 76 -5.4 -4.73388 | ATCGCATGGCGGTCA TGCT GGG AGCA TTTTTGATGGCCGTT TERM 2943 2276183 - 2276169 - g 70 -2.8 -4.72846 | GCACAGACGCAAAAA CAGC GTAAAGA GCTG GGGCTGATTGTGGTT CKO_02459 2275383 - 2276864 + | hypothetical protein TERM 2944 2276840 - 2276853 + T 70 -9.5 -3.10164 | opp_overlap 2276840 ACTTAAATTCAGAAA CCGCC CGCT GGCGG TTGAGTCCTGAATGA TERM 2945 2276853 - 2276840 - T 83 -9.5 -4.02534 | opp_overlap 2276840 ACTTAAATTCAGAAA CCGCC CGCT GGCGG TTGAGTCCTGAATGA CKO_02460 2276977 - 2276819 - | hypothetical protein TERM 2946 2276969 - 2276989 + g 77 -7.6 -4.3739 | gap 1, opp_overlap 2276969 ACGTATAAAAAAAAA CCGCC-ACA TTTC TGTTGGCGG TTTTCTCGGACGATG TERM 2947 2276989 - 2276969 - G 100 -7.6 -6.24157 | gap 1, opp_overlap 2276969 ACGTATAAAAAAAAA CCGCC-ACA TTTC TGTTGGCGG TTTTCTCGGACGATG CKO_02461 2277317 - 2277012 - | hypothetical protein TERM 2948 2277547 - 2277561 + G 83 -6.4 -4.93177 | opp_overlap 2277547 GTGCAGGCGTAATCA TCGGCA TCA TGCTGA TTTTCTTACTTTTTG CKO_02462 2277410 - 2277601 + | hypothetical protein CKO_02463 2277617 - 2279296 + | potassium-transporting ATPase subunit A TERM 2949 2280044 - 2280094 + G 83 -11.9 -3.68351 | CGCTCTGGCCCTTTT CCGCCTGGGGCGGCCA-TGCCGTCA GCG TGACGGTGCTGGTCGCCCT-GCTGG TTTGCCTGATCCCCA TERM 2950 2280730 - 2280716 - g 86 -10 -4.27192 | AAATGGGCATCAAAA CGGTGA TGA TCACCG GCGACAACCGCCTGA TERM 2951 2281169 - 2281195 + G 71 -8 -3.78785 | overlap 2281167 CGGATTCCGCAATCC TCAGCGCGGTGA TCT TCAATGCGTTGA TTATCGTTTTTCTGA CKO_02464 2279293 - 2281365 + | potassium-transporting ATPase subunit B CKO_02465 2281407 - 2281940 + | potassium-transporting ATPase subunit C TERM 2952 2282234 - 2282255 + G 73 -9.3 -3.84406 | TTCGATCTCGACGCG GCGCTGGCC CGTC GCCCGGCGC TTATTCTCATGGACG TERM 2953 2282294 - 2282273 - g 78 -12.3 -3.18383 | overlap 2282287 2282288 ATTCTCATGGACGAA CTGGCGCAC AGTA ATGCGCCAG GCTCGCGCCATCCCA TERM 2954 2282861 - 2282833 - g 77 -8.2 -4.07568 | gap 2, overlap 2282806 2282805 TCGCCTGCCGGAAAA GCAGCGGCGCGCCA TCT TGA-GCGCC-CTGC GTCTGGCGCAGGAGC CKO_02466 2281940 - 2284627 + | sensor protein KdpD TERM 2955 2285268 - 2285288 + G 73 -6.2 -4.40358 | gap 1, overlap 2285265 CCGCCATTTCATTAC CGA-AACCG GAAT CGGTTATCG TTTTATGCCATGAAT CKO_02467 2284624 - 2285301 + | DNA-binding transcriptional activator KdpE TERM 2956 2285299 - 2285312 + T 100 -3.9 -5.96521 | TATCGTTTTATGCCA TGAAT GGTT ATTCA TTTTTTTTAATTAAT CKO_02468 2285515 - 2285387 - | hypothetical protein CKO_02469 2285863 - 2288139 + | ornithine decarboxylase CKO_02470 2288136 - 2289455 + | putrescine transporter TERM 2957 2289488 - 2289462 - T 100 -10.1 -5.76949 | gap 1 CACGGTTAAAAAAAA GCCCGGT-GGCG CTAA CGCTTACCGGGC CTACGATCGTTGTTG CKO_02471 2291185 - 2289545 - | phosphoglucomutase TERM 2958 2290480 - 2290507 + g 76 -9.8 -3.91897 | gap 1 TACCGGAACCGCCCA GCGGATC-GACGC CCA GCGTCAGGCCCGC TTTCTGAATCGCCGC TERM 2959 2290776 - 2290786 + g 85 -2.4 -5.55769 | overlap 2290771 ACGATGCCATCAGCC AGCG GGC CGCC TTTTTTATTGTGAAC CKO_02472 2291755 - 2291210 - | replication initiation regulator SeqA TERM 2960 2291450 - 2291397 - G 70 -6.5 -4.12188 | opp_overlap 2291400 2291401, overlap 2291401 TCATCAGCCGCAAAA TAGACGCGCGTACGGCCATGCAACG ACTC CGTCGCTTCGGCAAACGCGCGATTA TCCAGTGAGTAGAGT TERM 2961 2291446 - 2291401 - G 80 -11.7 -3.40622 | opp_overlap 2291401 2291400, overlap 2291397 CAGCCGCAAAATAGA CGCGCGTACGGCCATGCAACG ACTC CGTCGCTTCGGCAAACGCGCG ATTATCCAGTGAGTA TERM 2962 2291486 - 2291497 + g 77 -7.2 -4.35483 | opp_overlap 2291486 CAGCACCAGCATGAA GCGG TTTA CCGC TTTCTTCTGCTCCGC TERM 2963 2291533 - 2291551 + g 75 -6.6 -4.45168 | CGTCGGAAAGCAGCA GTTCACGC ATG GCGCGGAC TTTATCTTTTACGGG CKO_02473 2291953 - 2292726 + | hypothetical protein TERM 2964 2292770 - 2292734 - f 73 -4.2 -4.77157 | gap 1, opp_overlap 2292734 2292769, overlap 2292735 2292736 2292738 CCAACTGATTAAAAA CTCAGCGTCCGCGCGCG ATTA CGTCCGCGGGCGTTG-G CGTGTCTGCCTTGCT TERM 2965 2292734 - 2292772 + F 70 -9.5 -2.95884 | gap 1, opp_overlap 2292734 2292735 2292736 2292738, overlap 2292769 CCAACTGATTAAAAA C-TCAGCGTCCGCGCGCG ATTA CGTCCGCGGGCGTTGGCG TGTCTGCCTTGCTGA TERM 2966 2293136 - 2293116 - g 81 -12.5 -3.09635 | opp_overlap 2293111 ATGCTGATGACTCAA CTGGCAGCG CTG CGCGGCCAG GGCGTAGTCTGAAAA CKO_02474 2292855 - 2293148 + | LexA regulated protein CKO_02475 2293213 - 2293362 + | hypothetical protein TERM 2967 2293596 - 2293580 - gf 74 -10.9 -2.78495 | overlap 2293577 CGACCAGGAAGATTA CGCAGAA TAT TTCTGCG ACGCGTTAGGCACCA CKO_02476 2293299 - 2293829 + | flavodoxin FldA CKO_02477 2294119 - 2294565 + | ferric uptake regulator TERM 2968 2294584 - 2294601 + T 100 -11.3 -5.64274 | opp_overlap 2294584 GAACCCTCCTAAAAA GCCAACC GACC GGTTGGC TTTTTTTATGCCTCC TERM 2969 2294601 - 2294584 - T 95 -11.3 -4.58283 | opp_overlap 2294584 GAACCCTCCTAAAAA GCCAACC GACC GGTTGGC TTTTTTTATGCCTCC TERM 2970 2294675 - 2294640 - T 74 -3.8 -5.00884 | overlap 2294646 AGCGGCCTTAAAAAA CGCAAACGGGCGGAGA GAAC TCTCCGCCCGCCATTA ACCCGCCCTGCTTTT TERM 2971 2294669 - 2294646 - T 100 -18.2 -4.05875 | overlap 2294640 CTTAAAAAACGCAAA CGGGCGGAGA GAAC TCTCCGCCCG CCATTAACCCGCCCT CKO_02478 2295021 - 2294689 - | hypothetical protein CKO_02479 2296477 - 2295071 - | hypothetical protein TERM 2972 2295613 - 2295588 - GR 76 -8.9 -3.75332 | overlap 2295559 2295558 ACTTTGTAACCGAAA GTCAGCGCCTG CAAC CAGGCGGTGCC GTCATAAATATCGTT CKO_02480 2296662 - 2296354 - | hypothetical protein CKO_02481 2296885 - 2296748 - | hypothetical protein TERM 2973 2296894 - 2296878 - G 100 -13.7 -5.75599 | GAAAGGATAAAAAAA CGCCGCA AAA TGCGGCG TTGGAAGGTGATGCG CKO_02482 2298588 - 2296921 - | glutaminyl-tRNA synthetase TERM 2974 2297560 - 2297572 + g 75 -6.9 -4.42639 | opp_overlap 2297553, overlap 2297553 2297557 ATCGATAACCGCCAT CGCGC GCG GTGCG TTTTCATTCAGATCT CKO_02484 2298904 - 2298758 - | hypothetical protein TERM 2975 2298894 - 2298871 - Gg 100 -17.4 -6.34424 | GCGGCAAAAAAAAAA GCGGCGGAGG TTTC CCCCCGCCGC TCAGGCACAAACTCT CKO_02485 2300871 - 2298922 - | N-acetyl glucosamine specific PTS system components IIABC TERM 2976 2299421 - 2299399 - Gg 71 -11.9 -2.52834 | overlap 2299398 CACCGCATTAGGAAC CGCCTGCGG TTTTG CCGCCGGCG CCGCAGTCACTGGCG CKO_02483 2298820 - 2300769 + | hypothetical protein TERM 2977 2300816 - 2300794 - Gf 100 -15.6 -3.1886 | ACCGAATCGCAGCAA CAGTGCCGCC ACC GGCAGCACTG CGATAGGGAGCTGTA TERM 2978 2300898 - 2300913 + FH 95 -3.2 -5.88565 | overlap 2300899 TACGAGACCCCGATT AGGCTT CTGG AAGCCA TTTTTTTATTGTGCG TERM 2979 2301601 - 2301588 - g 85 -2.3 -5.52023 | overlap 2301589 ATTATGAAGAAAAAA TCCGT TCTT ACGGT AAAATTCACCTGTTT CKO_02486 2301215 - 2302015 + | glucosamine-6-phosphate deaminase TERM 2980 2302023 - 2302051 + F 76 -4.6 -5.0538 | gap 1, overlap 2302023 2302024 GTCTGTAATGTTATC T-CCGCCCTGT ACGCAGAC GCAGGGCGGCA TTTTTTGAAATCGGG TERM 2981 2302919 - 2302929 + G 72 -4 -4.77036 | opp_overlap 2302919 GGCGGGTGCAAACAT TGAA CAG TTCA TTTTTGCTGGTAAAA CKO_02487 2302074 - 2303222 + | N-acetylglucosamine-6-phosphate deacetylase TERM 2982 2303662 - 2303678 + G 77 -8 -4.10164 | opp_overlap 2303653 2303661 TAATCAGCGTAAACT TCGCGA GTTAA TCGCGA TTTCTGTGATCCTGC CKO_02488 2303231 - 2304451 + | hypothetical protein TERM 2983 2304623 - 2304600 - g 90 -8 -4.75174 | GATGTAATGGAAAAA GGTCTGCCGC TGGT GCTGCTGACC AATTACCCTTCGCAG CKO_02489 2304498 - 2305250 + | UMP phosphatase TERM 2984 2307076 - 2307097 + G 73 -9.4 -3.78934 | CGGCAGAATGTGTGC CAGGCGGC CCGTCC GTCGCCTG TTCTTCTGCGAAGGC TERM 2985 2307155 - 2307139 - g 74 -7.3 -4.08945 | overlap 2307140 ATGAGGCGTTCAAAA CGATGGA CGA TCCATCA GGCCGCGCCGTCGGC CKO_02490 2305518 - 2307194 + | asparagine synthetase B TERM 2986 2307226 - 2307211 - g 100 -9 -4.84359 | opp_overlap 2307211 2307199 TTATCGTGATAAAAA GAGTCC TGCG GGACTC TTTTTTTACGCCGTT TERM 2987 2307211 - 2307226 + G 100 -9 -5.41746 | opp_overlap 2307211, overlap 2307199 TTATCGTGATAAAAA GAGTCC TGCG GGACTC TTTTTTTACGCCGTT CKO_02491 2307201 - 2307341 + | hypothetical protein TERM 2988 2308015 - 2308003 - T 73 -7.7 -4.15833 | overlap 2308011 ATGACGAGCGCAAAA CCCAA CCA TTGGG GTATCGCCAAGCGGT TERM 2989 2308091 - 2308118 + T 79 -11.4 -3.35996 | opp_overlap 2308097, overlap 2308097 TACCCCAGCCACATT AAAAAAGCTCGC TTCG GCGAGCTTTTTG CTTTTCTGTCTGGCG TERM 2990 2308112 - 2308097 - T 100 -10.4 -5.22312 | opp_overlap 2308097 2308091 AGCCACATTAAAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTTCTGT TERM 2991 2308097 - 2308112 + T 100 -10.4 -5.15526 | opp_overlap 2308097, overlap 2308091 AGCCACATTAAAAAA GCTCGC TTCG GCGAGC TTTTTGCTTTTCTGT CKO_02501 2309363 - 2308188 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 2992 2308733 - 2308722 - G 86 -7.2 -4.70626 | GAACAACGGTAAAAA GGCC CGTG GGCC GTCTGGCGTAAATTG CKO_02502 2309467 - 2310933 + | hypothetical protein TERM 2993 2310982 - 2310955 - f 75 -2.6 -5.2696 | gap 1, opp_overlap 2310967 2310968, overlap 2310956 TGAAAAGCGAAAAAA TGCCCGAT-GGCG CTG CACTTATCGGGCC TACGGCACAATATGG TERM 2994 2310967 - 2311018 + F 74 -10.2 -3.29511 | gap 1, opp_overlap 2310956 2310955 2311014, overlap 2310968 AAATGCCCGATGGCG CTGCACTTATCGGGCCTACGGCACA ATA TGGTTCGTAGGCCGGATAAG-GCAC TTGTGCCGCCATCCG TERM 2995 2310968 - 2311017 + F 83 -13.7 -2.57564 | gap 1, opp_overlap 2310956 2310955 2311014, overlap 2310967 AATGCCCGATGGCGC TGCACTTATCGGGCCTACGGCACA ATA TGGTTCGTAGGCCGGATAAG-GCA CTTGTGCCGCCATCC CKO_02503 2311177 - 2312223 + | hypothetical protein CKO_02504 2312220 - 2312687 + | putative metalloprotease TERM 2996 2312832 - 2312819 - g 75 -3.8 -4.93696 | opp_overlap 2312819 GTTAAACAGCAAAAA GGGA TTTTTT TCCC TGTTACTGAGCCAAC CKO_02505 2312703 - 2313650 + | hypothetical protein TERM 2997 2313699 - 2313725 + G 83 -10.2 -3.9461 | gap 1, opp_overlap 2313699, overlap 2313712 GCCTCACTGATTGAA CGCCAGC-GCA TTCGCC TGCTGCTGGCG TTATTATTCGGCGCC TERM 2998 2313738 - 2313754 + G 100 -9.3 -4.89852 | overlap 2313712 GCGTTATTATTCGGC GCCTGCG GAA CGCTGGC TTTTTCTCCGTATGA CKO_02506 2313675 - 2315213 + | apolipoprotein N-acyltransferase TERM 2999 2315300 - 2315313 + F 72 -6.7 -4.27259 | opp_overlap 2315300 TATTGCTTTGTTAAA CAAGG TAAA CCTTG TTTTGGCTATATGTG TERM 3000 2315660 - 2315645 - g 76 -11.8 -3.05343 | GGCACACGCGGAAGA CGCCGC GCCG GCGGCG GGCAGTACGCTGGAT TERM 3001 2316239 - 2316228 - g 90 -5.8 -5.22039 | GCGAAAGCCAAAAAA CCAG ACAA CTGG GAGATCGTCGGTAAG CKO_02507 2315529 - 2316482 + | glutamate and aspartate transporter subunit TERM 3002 2316571 - 2316547 - f 82 -11.5 -3.50045 | ACGGACAGACTATAA GCCTGATGG TCGTTCC CCATCAGGC CTGAAAACCGCAAAA TERM 3003 2316607 - 2316623 + F 100 -12.3 -5.94713 | GATAACAATCTTCGA GGGTAGC GCT GCTACCC TTTTTTTTCTGGAGT TERM 3004 2317235 - 2317190 - g 71 -4.6 -4.58283 | overlap 2317192 GAACCTGGTGAAAAA CTCCGCCATCGCATCGACCA TTGGTC TGGTGGATATGGCGGCGCAG GCGGGCAAGCTGCTG CKO_02509 2316645 - 2317385 + | hypothetical protein CKO_02510 2317385 - 2318059 + | hypothetical protein TERM 3005 2318285 - 2318267 - g 93 -4.5 -5.71983 | TGAATGACAAAAAAA CGGATCT GGCGA AGCTCCG CTCGCGGGTCGGAAT TERM 3006 2318427 - 2318407 - g 73 -5.3 -4.56597 | CCCGCCCGTGAAAAA GCGCAGAAG TTG CTTGAGCGC GTAGGACTCTCAGCC CKO_02511 2318059 - 2318784 + | hypothetical protein TERM 3007 2319162 - 2319187 + G 76 -12.6 -2.71712 | gap 1, opp_overlap 2319154, overlap 2319161 2319164 GGCGAAAGCGGACTG GACGGC-CCGG CGCTA CCGGAGCCGTC ATTTGCGCCGCAGAC CKO_02512 2318901 - 2319839 + | ribonucleoside hydrolase 1 TERM 3008 2319914 - 2319902 - T 70 -9.1 -3.30124 | overlap 2319886 TTGTAGGCCGGATAA GACGC TTC GCGTC GCCATCCGGCACTGC CKO_02513 2320415 - 2319933 - | hypothetical protein TERM 3009 2320949 - 2320932 - g 100 -12.7 -4.40561 | overlap 2320929 GGCGGTGAAAAACAA CACGGCG CCGG CGCCGTG GACCTATGACAACAT TERM 3010 2320996 - 2320980 - g 76 -5.1 -4.8048 | CGCCTACATGAAAAA CCAGC TCAAAAT GCTGG GCTTCGGCTATGACT TERM 3011 2321565 - 2321554 - g 81 -3.6 -5.28778 | ACGATGGAGAAAAAA GGCG TCGA CACC GGTTTTAAAGCCATT TERM 3012 2323105 - 2323091 - g 83 -10 -4.08064 | AAGTCCGTGGCAAAA TCACCG TAC CGGTGA ACGCCACTGAAGAAC CKO_02514 2320627 - 2323233 + | leucyl-tRNA synthetase CKO_02515 2323344 - 2323841 + | hypothetical protein TERM 3013 2323865 - 2323900 + G 79 -13.9 -2.84723 | opp_overlap 2323865, overlap 2323862 TTGTACCCTGAACAA CTCCGCGCACAGCTC AATGAA GGGCTGCGCGCGGCG TACTTGCTCTTGGGC TERM 3014 2323900 - 2323865 - g 89 -13.9 -3.63515 | opp_overlap 2323862 2323865 TTGTACCCTGAACAA CTCCGCGCACAGCTC AATGAA GGGCTGCGCGCGGCG TACTTGCTCTTGGGC TERM 3015 2324831 - 2324855 + G 78 -2.2 -5.16071 | gap 1, overlap 2324832 GGGCTTTCTCTTCTT C-TCTGCCA CAAAGCGC TGGCAGATG TTTTTATTGATGGTT CKO_02516 2323841 - 2324872 + | DNA polymerase III subunit delta TERM 3016 2325172 - 2325182 + G 74 -8.2 -3.96148 | opp_overlap 2325162 AGCAAGGCCCGGACG CGCC GCT GGCG TTTATCATCGGCCAG CKO_02517 2324865 - 2325515 + | nicotinic acid mononucleotide adenylyltransferase CKO_02518 2326584 - 2325490 - | threonine-phosphate decarboxylase TERM 3017 2327129 - 2327107 - g 90 -4.8 -5.33331 | opp_overlap 2327107 TAAAGATAATAAAAA CCTGCTGG TCGTGAG CCACCAGG GGGTTCTGAGTCTCA CKO_02519 2326679 - 2327290 + | hypothetical protein TERM 3018 2327616 - 2327589 - g 75 -7 -4.4715 | overlap 2327590 TTGTAATCGACAAAA TTGATGACCTGA AAGG TCAGGACATCAT CACCTTAGATGTTCA TERM 3019 2327615 - 2327590 - g 71 -10.5 -3.27808 | overlap 2327589 TGTAATCGACAAAAT TGATGACCTGA AAGG TCAGGACATCA TCACCTTAGATGTTC CKO_02520 2327549 - 2327866 + | hypothetical protein CKO_02521 2327870 - 2328337 + | SPOUT methyltransferase superfamily protein TERM 3020 2328421 - 2328438 + G 90 -5.5 -5.19916 | gap 1 GTCCGCGCTGTTCGT GCG-CCGG GCG CTGGTCGC TTTTTTGGGTATTTT TERM 3021 2329178 - 2329158 - g 71 -8.2 -3.77177 | opp_overlap 2329166 AGCAATATATTGAAA CGCTGCTG GCGGG CAGCCGCG CCGCTGTGATCGTAA TERM 3022 2329705 - 2329690 - g 71 -4.6 -4.61527 | overlap 2329680 AAAACGCTTTAAAAA GCCGTG GTAT CAGGGC GATACCATCCCGGTG CKO_02522 2328368 - 2330269 + | penicillin-binding protein 2 CKO_02523 2330272 - 2331384 + | cell wall shape-determining protein TERM 3023 2331715 - 2331684 - g 74 -11.6 -3.20723 | opp_overlap 2331685 CCGGCAGCAATTTAA CCGCATCGGGCGAA GCGT TTGACCCGATGCAG CTCACCGCTGCGCAT CKO_02524 2331395 - 2332519 + | rare lipoprotein A CKO_02525 2332639 - 2332490 - | hypothetical protein TERM 3024 2333214 - 2333177 - g 75 -6.2 -4.56597 | CCTGGGTCTGAAAAA CACCCACTTCCAGACC GTTCAT GGCCTGGATGCTGATG GACAATACAGCTCTG CKO_02526 2332659 - 2333870 + | D-alanyl-D-alanine carboxypeptidase fraction A TERM 3025 2333920 - 2333950 + F 100 -16.4 -5.23316 | opp_overlap 2333926 ATATACTGAGTATCC TGATAACTCCCACA CGC TGTGGGAGTTATTA TTTTTTGATGTAATG TERM 3026 2333944 - 2333926 - f 86 -13.2 -3.31792 | opp_overlap 2333920 TGAGTATCCTGATAA CTCCCACA CGC TGTGGGAG TTATTATTTTTTGAT CKO_02527 2333977 - 2334240 + | hypothetical protein CKO_02528 2334311 - 2334979 + | lipoyltransferase TERM 3027 2335020 - 2334989 - f 84 -7.5 -4.78572 | gap 1, opp_overlap 2334994, overlap 2334991 2334994 GCTTAATCAATAAAA TATAATGACCCACG CAATT CATGGGTCATTA-A CTATATATTGCTTGA TERM 3028 2335019 - 2334991 - f 95 -12.6 -4.00694 | opp_overlap 2334994, overlap 2334989 2334994 TTAATCAATAAAATA TAATGACCCACG CAATT CATGGGTCATTA ACTATATATTGCTTG TERM 3029 2335016 - 2334994 - f 83 -9.9 -4.09554 | opp_overlap 2334994, overlap 2334991 2334989 ATCAATAAAATATAA TGACCCACG CAATT CATGGGTCA TTAACTATATATTGC CKO_02529 2335280 - 2336254 + | putative DNA-binding transcriptional regulator CKO_02530 2336442 - 2337407 + | lipoyl synthase TERM 3030 2337444 - 2337459 + T 100 -7.5 -5.47159 | opp_overlap 2337444 2337437, overlap 2337437 TTAACGCATAAAAAA CCCGC TTAAAC GCGGG TTTTTTCTCTTCAGA TERM 3031 2337459 - 2337444 - T 95 -7.5 -5.31456 | opp_overlap 2337437 2337444, overlap 2337437 TTAACGCATAAAAAA CCCGC TTAAAC GCGGG TTTTTTCTCTTCAGA CKO_02531 2337711 - 2337508 - | twin arginine translocase protein E CKO_02532 2338629 - 2337841 - | hypothetical protein TERM 3032 2338963 - 2338982 + G 89 -2.8 -5.52384 | overlap 2338966 CCTGACCACGTTTTC CACCTTCT CAGC GGAAGTTG TTTTTTTGCTCCAGG TERM 3033 2338966 - 2338979 + G 74 -3.1 -4.8487 | overlap 2338963 GACCACGTTTTCCAC CTTCT CAGC GGAAG TTGTTTTTTTGCTCC CKO_02533 2338781 - 2339104 + | hypothetical protein TERM 3034 2339133 - 2339118 - T 100 -11.8 -5.70829 | opp_overlap 2339118 AAGAGCATAAAAAAA CCCGCC AGTT GGCGGG TTTTGGAATTCTTGC TERM 3035 2339118 - 2339133 + T 95 -11.8 -4.24123 | opp_overlap 2339118 AAGAGCATAAAAAAA CCCGCC AGTT GGCGGG TTTTGGAATTCTTGC CKO_02534 2339461 - 2339159 - | cold shock protein CspE TERM 3036 2339410 - 2339394 - G 71 -7.3 -4.02302 | TTTACATGAAAAATA GACACAA ATG CTGTGTC GGGTACCAGTACATC CKO_02535 2340119 - 2339556 - | palmitoyl transferase for Lipid A TERM 3037 2339892 - 2339914 + g 89 -3.4 -5.73978 | gap 1, overlap 2339884 AAACCCTGCCCCCCA CGGG-CGCT CATTGT AGCGATCCG TTTTTTCTTTATCGT CKO_02536 2340449 - 2340273 - | hypothetical protein TERM 3038 2340394 - 2340381 - G 80 -5.3 -4.91778 | opp_overlap 2340381 CAAATACAAAACAAA TACGT TTCT ACGTA AATTTTTCGCCTGAG TERM 3039 2340451 - 2340467 + rH 76 -5.1 -4.89562 | opp_overlap 2340451 2340449 AAAAATAACAACACA GGACG TTTAATC CGTCC TTTTCTTGATTTTAA TERM 3040 2341264 - 2341254 - gR 90 -5.4 -5.252 | overlap 2341259 TATCTGGATAAAAAA GAGA ACA TCTC CCATGAAATGCTGGA TERM 3041 2341837 - 2341853 + Gr 70 -8.7 -3.62096 | overlap 2341838 TTGCGGTGGCAGGGA TGGCGAA GAT TTCGCCG TTTGAAGTGGTGAAG CKO_02538 2342244 - 2341909 - | hypothetical protein CKO_02537 2340579 - 2341964 + | C4-dicarboxylate transporter DcuC TERM 3042 2342079 - 2342051 - GT 79 -12.3 -2.90075 | opp_overlap 2342060 GGCCCGGTAAGCATA GCGCCACCGGGCG ATT CGCCGGATGGCGG CGGTAACGCCTTATC CKO_02539 2342918 - 2342241 - | two-component response regulator DpiA CKO_02540 2344548 - 2342887 - | hypothetical protein TERM 3043 2344495 - 2344485 - GH 72 -2.4 -4.94902 | overlap 2344476 GAATGAGCAGAAAAA TCCG CAG CGGG AACGCGAGTTGACGA CKO_02541 2344935 - 2346011 + | hypothetical protein TERM 3044 2346157 - 2346125 - g 91 -9.8 -4.58663 | opp_overlap 2346130 AGCAGCGTTGAAAAA CAGTTTGGTGACGC CATTC GCGCCACCATTCTG GATGTGCTTGCCCGT CKO_02542 2346008 - 2346304 + | citrate lyase subunit gamma TERM 3045 2347110 - 2347087 - g 75 -11.6 -3.33261 | opp_overlap 2347086 GTGGAAGCCGCAGAA GCCGCCGCCC GTGA AGGCCGCGGC GTCGTCTCCCTGAAC CKO_02543 2346349 - 2347209 + | hypothetical protein TERM 3046 2347478 - 2347456 - g 71 -12 -2.52834 | opp_overlap 2347449, overlap 2347455 GACCTGACGATCAAC CTGGTGATGG ACA CCATCGCCAG CATGGGCTTTAAAAA CKO_02544 2347219 - 2348751 + | hypothetical protein TERM 3047 2348930 - 2348913 - gf 70 -9.1 -3.44848 | overlap 2348911 CGGCCCGATTAAAGA CAGCGAG CTTA CTCGCCG AATCTTCAATCACGG CKO_02545 2348755 - 2349306 + | 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase TERM 3048 2349458 - 2349492 + GF 72 -5.6 -4.41548 | gap 1, opp_overlap 2349438 2349439 2349436 CTGGAAGATTTCCAT CGCAGCGCGCTGGCC ATTCAG GGCTGGC-TGCCGCG TTTTATCGAATATGG CKO_02546 2349278 - 2350186 + | triphosphoribosyl-dephospho-CoA synthase TERM 3049 2350371 - 2350403 + G 80 -10.5 -3.80625 | opp_overlap 2350358, overlap 2350366 2350364 2350372 TACTGGAGCCGATTC CGGCCACCGCGATCA GTT TTATCGCGGTGACCA TTTGCGTTATCGGCA TERM 3050 2350372 - 2350402 + G 86 -14 -2.88054 | opp_overlap 2350358, overlap 2350366 2350364 2350371 ACTGGAGCCGATTCC GGCCACCGCGATCA GTT TTATCGCGGTGACC ATTTGCGTTATCGGC TERM 3051 2350450 - 2350462 + G 76 -10.5 -3.72576 | TGATGCCTCAGAGCT GGCCG ACC CGGCC TTTAATGCGGGCAAG TERM 3052 2350774 - 2350785 + G 71 -7.2 -4.05208 | overlap 2350772 CGATCCTTCCGCGCG CCGC ATTG GCGG TTATTTGATGTGGAT CKO_02547 2350211 - 2351674 + | hypothetical protein TERM 3053 2351723 - 2351746 + F 100 -12.5 -5.71983 | CGTTATCCCTCTCAT GCCAGTCAG ATAAAC CTGACTGGC TTTTTTTATGGTTAA CKO_02548 2351803 - 2352609 + | ribonuclease I TERM 3054 2352769 - 2352747 - f 87 -11.2 -3.87551 | opp_overlap 2352747 ATCATGAAAGCTAAA CCCTCGCCGC CTG ACGGTGAGGG TTTTCTTTTGGGATT TERM 3055 2352747 - 2352769 + F 100 -12.7 -5.10163 | opp_overlap 2352747 ATCATGAAAGCTAAA CCCTCGCCG CCTGA CGGTGAGGG TTTTCTTTTGGGATT CKO_02549 2352828 - 2353238 + | nucleoside diphosphate kinase regulator TERM 3056 2353291 - 2353271 - T 74 -11.2 -2.87564 | opp_overlap 2353271, overlap 2353273 TCACCCGTTTACACA GAGGATGC TCCCT GCATCCTC TTTCCGAAAATCACC TERM 3057 2353271 - 2353291 + T 82 -11.2 -3.54424 | opp_overlap 2353271 2353273 TCACCCGTTTACACA GAGGATGC TCCCT GCATCCTC TTTCCGAAAATCACC CKO_02550 2353992 - 2353486 - | hypothetical protein TERM 3058 2354048 - 2354068 + rH 100 -16.9 -3.17901 | opp_overlap 2354048 TGTTGCGTAAAAAAA GAGGCTGCC ATT GGCAGCCTC TTGCATTGCAGGTGT TERM 3059 2354068 - 2354048 - RH 100 -16.9 -5.40072 | opp_overlap 2354048 TGTTGCGTAAAAAAA GAGGCTGCC ATT GGCAGCCTC TTGCATTGCAGGTGT CKO_02552 2355664 - 2354099 - | hypothetical protein TERM 3060 2355740 - 2355685 - gRH 80 -7 -4.56597 | gap 1, overlap 2355688 TTCCCTCTCTAAAAA CATCATCATGCAAGTTGCCTT-ATACC GGC AGCCTGAATGCGACTTGCATGATGGTG CTGGAAAAAACGGGT TERM 3061 2355767 - 2355751 - gRH 100 -13.7 -5.00616 | TGGTGCTGGAAAAAA CGGGTGC GAC GCACCCG CTTAAGGATTAATTC CKO_02551 2355654 - 2355779 + | hypothetical protein CKO_02554 2356467 - 2355904 - | alkyl hydroperoxide reductase subunit C TERM 3062 2356392 - 2356414 + Gg 71 -4.8 -4.57569 | CTTCGGTATCTTTCT CGGTTACTTC GAT GAATTCACCG TTTTTGAACGCCTGG CKO_02553 2355985 - 2356500 + | hypothetical protein TERM 3063 2356633 - 2356614 - fH 100 -9.2 -5.2197 | GACAAAAAGTAAAAA GGCCCCCT TTAC AGGCGGCC CCATTACCTGAACTA TERM 3064 2356667 - 2356681 + FH 70 -10 -3.10513 | GTAGGTAACTTCAGC GCCAGT GAA ACTGGC TATGTGTTGCGCTCT CKO_02555 2356842 - 2357588 + | disulfide isomerase/thiol-disulfide oxidase CKO_02556 2357770 - 2358705 + | hypothetical protein TERM 3065 2358738 - 2358787 + F 80 -5.5 -5.055 | gap 1, opp_overlap 2358738 CCATCGCCGACACAA GCATTCAAAA-TTAAAATAATT AATATAA AATTAATTTAAGTTTTGGATGC TTTTTTAAACCTTGC TERM 3066 2359480 - 2359458 - gf 71 -7.6 -3.96148 | TTTGCGGACGACAAA CCCTGGACGA CCG CCGCTCAGGG CGGGCACACCTGGTA TERM 3067 2359918 - 2359902 - gf 85 -6.6 -4.96501 | overlap 2359906 TGGTATAAAAAGAAA GGAATG GAGAA CATTCC ACAAACGCAGGAAGG CKO_02557 2358888 - 2360123 + | hypothetical protein CKO_02558 2360096 - 2360713 + | hypothetical protein CKO_02559 2361883 - 2360714 - | putative aminotransferase TERM 3068 2361471 - 2361431 - G 89 -13.4 -3.6715 | gap 2, opp_overlap 2361437 2361460 CCAGTCAACGCGAAA CT-GCGGCG-GCTGAAGCGC CAG ACGTTTCAGCACGCCGCCAG ACAGTTCAACGGCTG CKO_02560 2362005 - 2363093 + | hypothetical protein CKO_02561 2363238 - 2363122 - | hypothetical protein CKO_02562 2363383 - 2363186 - | hypothetical protein TERM 3069 2363429 - 2363406 - R 74 -11 -2.78798 | overlap 2363405 ACCTGTGACGCAAAT GCCCTCTCCC GTTA AGAAGAGGGC CGCTTATTTAAAAAT CKO_02563 2365549 - 2363444 - | hypothetical protein TERM 3070 2363537 - 2363553 + g 79 -7.9 -4.4078 | overlap 2363539 CGGTTTGTCCTCTTT CAGCGCT GCC AGCGCAG TTTTGATTGAGAACA TERM 3071 2364077 - 2364065 - G 70 -6.9 -4.19177 | overlap 2364066 ATCCTGCAACATAAA GCGCG CCG CACGC GTACCGGCATCAACC CKO_02564 2366138 - 2365725 - | hypothetical protein CKO_02565 2366896 - 2366141 - | 2,3-dihydroxybenzoate-2,3-dehydrogenase CKO_02566 2367753 - 2366896 - | hypothetical protein CKO_02567 2369380 - 2367767 - | enterobactin synthase subunit E CKO_02568 2370562 - 2369387 - | hypothetical protein TERM 3072 2369464 - 2369422 - G 71 -7.7 -3.92602 | gap 1, overlap 2369463 TCAACATGGTAGAAA GCTTCA-CGCCGGTCTCG CGCCACTC CGCGACCGGAGACGAAGC AGGCACAATCCCGGC TERM 3073 2371049 - 2371032 - g 71 -9.8 -3.54543 | AGCGACGTTGCGAAA GCGCGC AAGCTG GCGCGC CTGTACATCGGCGAA CKO_02569 2370909 - 2371706 + | iron-enterobactin transporter periplasmic binding protein CKO_02570 2373000 - 2371750 - | enterobactin exporter EntS TERM 3074 2373145 - 2373156 + G 74 -7.2 -4.12474 | overlap 2373128 GTGGCACGCGCCATC GCCG TGCC CGGC TTGTTGTTATTACTT CKO_02571 2373112 - 2374119 + | iron-enterobactin transporter membrane protein TERM 3075 2374322 - 2374350 + G 74 -4.5 -4.7078 | overlap 2374324 2374325 2374348 GATGGCGCTGCTGAT TGGCGCCGC GCTGGGCGTCA GCGGCGCGA TTTTTCAGTCGTTGA CKO_02572 2374116 - 2375108 + | iron-enterobactin transporter permease CKO_02573 2375105 - 2375902 + | iron-enterobactin transporter ATP-binding protein TERM 3076 2375934 - 2375986 + T 84 -8.4 -4.67234 | TTAACCATGCAGGCC CGGTCAG-CGACAGCGCCACCGGGCG ATT TGCCGGATGGCGCT-TAGACTAACCG TTTTTCCAGTTGAAT CKO_02574 2377150 - 2375975 - | ferric enterobactin transport protein FepE TERM 3077 2376245 - 2376257 + g 84 -9.1 -4.35926 | overlap 2376243 GTTAATTTCCGCAAC GTCCG TGA CGGAC TTTTCAATTTGCAAT TERM 3078 2376976 - 2376989 + g 78 -6.7 -4.56775 | opp_overlap 2376975 2376976 2376985 2376986 CAAACGCAAAAACAG TCGCA ATAA TGCGA TTTTTCGCCCGCCAT TERM 3079 2377321 - 2377293 - R 100 -9.7 -5.4659 | GAAGACAAATAAAAA GCCCATAATAATT GGT AGCTATTATGGGC ATCAGTAGAATTAGA CKO_02575 2381247 - 2377363 - | enterobactin synthase subunit F TERM 3080 2377863 - 2377879 + g 72 -12.3 -2.74144 | overlap 2377862 AGTAAGGCCCGTGCG GCTGCTG CGC CAGCAGC GTTTCCAGATGACGC TERM 3081 2378028 - 2378018 - G 77 -8.2 -4.18762 | AACTGCCAGGCAAAA CCGG ACG CCGG ATGGAAGCAGAATAA TERM 3082 2379738 - 2379702 - G 86 -10 -4.26076 | gap 1, opp_overlap 2379702 CCAGCGTCAGGAAAA CCGAGCG-CGGCAACGC CACC GCGACGCTGTCGCCCGG TTTAACGCCACGTTC TERM 3083 2380261 - 2380289 + g 85 -2.3 -5.58454 | overlap 2380263 GTCGCGAACGATCTG TTCGGCGTCATAA CGC TGATGGCGACGCA TTTTTTTCATCTGCC TERM 3084 2380873 - 2380844 - G 95 -15.1 -3.32521 | AGTAGATGGTGATAA CGCTGATACCAGT ACCA ACGGGTATCAGCG ACCTGAATCAACTGG CKO_02576 2381462 - 2381244 - | hypothetical protein CKO_02577 2382706 - 2381492 - | enterobactin/ferric enterobactin esterase TERM 3085 2382097 - 2382083 - G 74 -7.8 -4.07568 | GCTTTCCGCCCAAAA CTGCCC GTC GAGCAG AATCGCTAGCGGACG TERM 3086 2382152 - 2382100 - G 75 -11.1 -3.40403 | opp_overlap 2382146 GCCCGTCGAGCAGAA TCGCTAGCGGACGTTCAGGTCGGGC GTC GCCGGTCGTGAACACCCACACGCGA CGCGTATTGCCCAAC TERM 3087 2382634 - 2382655 + g 83 -10.1 -4.18018 | ATTTTTCGTCTGTTT CACGCTCCC ATTC GGGACCGTG TTTTGACTGCCACCA TERM 3088 2382896 - 2382906 + G 85 -6.8 -4.8667 | CACAACCTGAAACCT GCAC TGC GTGC TTTTTCTGGAATGTA CKO_02578 2382752 - 2383015 + | hypothetical protein TERM 3089 2383696 - 2383679 - g 75 -6.9 -4.4017 | overlap 2383681 2383683 GCAACCTGGATAAAA CTCAGGC CGAC GCCTGGG ACATCAACCAGGGCC TERM 3090 2385100 - 2385084 - g 72 -2.1 -4.88407 | overlap 2385085 GGACGTAACCAAAAA CGTCAGC CTG ACCGGCG GCGTGGATAACGTCT CKO_02579 2383012 - 2385255 + | outer membrane receptor FepA TERM 3091 2385265 - 2385288 + F 100 -14.6 -4.82901 | opp_overlap 2385262 TTCTGATAACGACCG CCCTCTCCCT GAAC GGGGAGAGGG TTTTTATGAGAAACC CKO_02580 2385294 - 2385956 + | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex TERM 3092 2386086 - 2386045 - T 88 -12.5 -3.65046 | opp_overlap 2386057 CCTCCATGCGAAGAA GAGACTAACAAGCCGAA TTGTCGTG TTCGGGTTGTTAGCCTC AAGGTTGACGGAACT CKO_02581 2388159 - 2386126 - | choline transport protein BetT TERM 3093 2388457 - 2388443 - g 77 -4.2 -4.87665 | opp_overlap 2388454, overlap 2388445 CTGGAGCGATAAAAA TGCCCA AAG TGGGGA TGCAAACCCTTCGTC CKO_02582 2388424 - 2389035 + | transcriptional regulator BetI TERM 3094 2389242 - 2389203 - g 80 -9.1 -4.07687 | ATCGCGCCGTGAAAA GCGCGCAGCGCGGACAA AAAATG TGGGCCGCGATGAGCGC AATGGCACGCTCGCG CKO_02583 2389058 - 2390521 + | betaine aldehyde dehydrogenase TERM 3095 2391751 - 2391735 - g 93 -13.7 -3.83502 | CATGTGCACATTAAA TCGCGCG ATC CGCGCGA GCATCCGGCCATTCT TERM 3096 2391935 - 2391947 + G 80 -10.5 -3.84246 | opp_overlap 2391935 GTTTGTGCGAGACCA CGCGG AGA CCGCG TTTCATCCTTGCGGC CKO_02584 2390535 - 2392211 + | choline dehydrogenase CKO_02585 2392317 - 2393435 + | carboxylate-amine ligase CKO_02587 2393629 - 2393429 - | hypothetical protein CKO_02588 2395303 - 2393678 - | hypothetical protein CKO_02586 2393501 - 2393749 + | hypothetical protein TERM 3097 2394783 - 2394754 - Gf 81 -3.5 -5.21236 | gap 1, overlap 2394756 AACCGAGAATAAAAA CG-TTCTGCTTCGC ACC GCGCCACAGAAACG TAACCCGCTTATGGC TERM 3098 2394858 - 2394883 + gF 71 -4.5 -4.67904 | opp_overlap 2394858 TCCTGCCAGAAATGA GCGGTTCCGGC GCCT GCCGCCAGCGC TTTTTCCAGTTGCTG TERM 3099 2395062 - 2395040 - Gf 73 -5.5 -4.54026 | CGGCAAAGAAAACAA CAGCTGATG CTCGC CATCGGCCG GGCCGCCTTCCAGTA CKO_02589 2395458 - 2397605 + | hypothetical protein TERM 3100 2397641 - 2397610 - T 89 -10.9 -4.15222 | gap 1, overlap 2397612 ATTCCTGGTAAGAAA GATT-CCCGGCAGC CAGGC GCTGCCGGGGAAAC TCAGTGCGTACGGCT TERM 3101 2397638 - 2397612 - T 100 -13.7 -3.6761 | overlap 2397610 TCCTGGTAAGAAAGA TTCCCGGCAGC CAGGC GCTGCCGGGGA AACTCAGTGCGTACG CKO_02590 2397736 - 2397593 - | hypothetical protein CKO_02591 2398022 - 2397642 - | hypothetical protein CKO_02592 2399113 - 2398013 - | hypothetical protein TERM 3102 2398257 - 2398271 + g 74 -7.8 -4.21194 | ATGTATCGCCAGTCC CGGTCG TAC TGACCG TTTTCCATGATGGCC CKO_02593 2399304 - 2399885 + | hypothetical protein CKO_02594 2399885 - 2400253 + | hypothetical protein CKO_02595 2400261 - 2400398 + | hypothetical protein CKO_02596 2400374 - 2401027 + | dihydropteridine reductase TERM 3103 2401090 - 2401115 + T 73 -11.1 -2.57931 | gap 1, overlap 2401089 2401099 CACACGTTATTGTAG GCCCGGTAAGCG TCG CGCC-ACCGGGC ATTATGCCGGATGGC TERM 3104 2401099 - 2401138 + T 70 -10.6 -2.57931 | gap 1, overlap 2401090 2401089 2401128 TTGTAGGCCCGGTAA GCGTCG-CGCCACCGGGCA TTA TGCCGGATGGCGGCTGCGC CTTATCCGGCCTACG TERM 3105 2401237 - 2401264 + T 79 -7.6 -4.37527 | gap 1, overlap 2401238 GCATACGTTATTGTA GGCCCGGTAAGCG TAG CGCC-ACCGGGCA TTTTACTGCTTATCC TERM 3106 2401238 - 2401263 + T 77 -11.1 -3.21793 | gap 1, overlap 2401237 CATACGTTATTGTAG GCCCGGTAAGCG TAG CGCC-ACCGGGC ATTTTACTGCTTATC CKO_02597 2402133 - 2401267 - | hypothetical protein TERM 3107 2402698 - 2402753 + G 89 -3 -5.5353 | gap 1, overlap 2402701 2402716 TTATCGTCGGTCAAA TGGGCGGCGGCTGGCTGGTCTCGGCGG ATA TCGCCGGGCTTGGCTGGC-GCAACGCA TTTTTTATTAATGTC TERM 3108 2403036 - 2402987 - g 78 -6.9 -4.59773 | gap 1, opp_overlap 2402987 2402996, overlap 2402988 GTGGATGCGTAAAAA TGCGCTCCGGCAGGAGC-TGCGCC ACC AGCACCCGCTTCTGCCGCCGCGCC TGTTACGGCTGACCA TERM 3109 2403035 - 2402988 - g 73 -10.4 -3.35542 | gap 1, opp_overlap 2402987 2402996, overlap 2402987 TGGATGCGTAAAAAT GCGCTCCGGCAGGAGC-TGCGCC ACC AGCACCCGCTTCTGCCGCCGCGC CTGTTACGGCTGACC CKO_02598 2402301 - 2403677 + | hypothetical protein TERM 3110 2403713 - 2403734 + F 95 -11.6 -3.85698 | opp_overlap 2403708 2403707 2403705 TGCATAATATCCGCA CAGCGGTC ATCATA GACCGCTG TTTATAAAGGAGACG TERM 3111 2403799 - 2403821 + G 70 -2.8 -4.7153 | gap 1, opp_overlap 2403799 2403802, overlap 2403802 CGGGATCGAAATGAA TCA-CACCA CTTCGC TGGTGATGA TTTTTGGCATTATTT TERM 3112 2403909 - 2403898 - g 74 -7.2 -4.08767 | GCGAGCCTTTGAAAA GCGC GCCA GCGC CAGTTCACGCCTGTG CKO_02599 2403752 - 2404996 + | hypothetical protein CKO_02600 2405979 - 2404999 - | hypothetical protein TERM 3113 2406043 - 2406030 - R 81 -8.1 -4.46926 | GAGGCTACCATAAAA TCGCC CTCC GGCGA ACCGGGCGAAGGTTT CKO_02601 2407208 - 2406057 - | hypothetical protein CKO_02602 2408233 - 2407205 - | hypothetical protein CKO_02603 2409490 - 2408249 - | hypothetical protein TERM 3114 2408325 - 2408293 - G 100 -10.5 -4.69549 | AAGCGAAAAGGAAAA TCGCGGCAATCACCG CAG CGGCCACTGCCGGGA GCCACCAGAACGTCA TERM 3115 2409556 - 2409545 - g 70 -3 -4.69549 | AACTCAAAATGAAAA GTAA TCGA TTAC AAAACAAAGATCCTG TERM 3116 2409577 - 2409565 - g 86 -7.7 -4.80453 | CGATTACAAAACAAA GATCC TGC GGATC AAATAAGAATTGCGA CKO_02604 2409538 - 2409717 + | hypothetical protein CKO_02605 2411050 - 2409689 - | phenylalanine transporter TERM 3117 2411196 - 2411156 - R 73 -11.3 -2.64912 | gap 3, opp_overlap 2411184, overlap 2411155 GCCGCAAGGCACAAT CCTCAGGGATGCGCCAGGCA TCCC TGCCTGACGC--CCC-GAGG CGACGCTATTTATTA CKO_02606 2412327 - 2411209 - | hypothetical protein TERM 3118 2412474 - 2412442 - H 71 -7.9 -4.00756 | opp_overlap 2412446, overlap 2412446 CAGGCCATTAAATAA TAAAGAGAATGAGAA CTA TACTTATTCTCTTTA GCGAAGCAAGAATAA TERM 3119 2413046 - 2413063 + G 71 -10.5 -3.22475 | overlap 2413045 GTATCACTTGCGCCT CGGCCCG CTCA TGGGCCG TATTCTGGAGCTACG TERM 3120 2413151 - 2413139 - g 74 -7.7 -4.16279 | CAGACGACGTGAAAA GGACT ATC AGTCC TGCCAGCAGTATATT TERM 3121 2413584 - 2413559 - g 78 -11.9 -3.17392 | gap 1, overlap 2413546 2413562 GATGGTTCAACTTAA CCAGGCCAGGCA GAA TGCC-GACCTGG CCACGATCCGTTCGC CKO_02607 2412702 - 2413877 + | hypothetical protein CKO_02608 2414626 - 2413931 - | hypothetical protein CKO_02609 2414797 - 2414660 - | hypothetical protein TERM 3122 2414806 - 2414795 - G 76 -3 -5.04597 | ATTGATACATAAAAA CATT CATA AATG ATTAAAGTTAGCGTA CKO_02610 2415208 - 2415029 - | hypothetical protein CKO_02611 2418400 - 2415254 - | hypothetical protein TERM 3123 2417503 - 2417513 + g 71 -4.6 -4.56597 | opp_overlap 2417503 TCACGGCGGAAATAA CGTC CCG GGCG TTTTTACCGGAACGC CKO_02612 2419710 - 2418412 - | copper/silver efflux system membrane fusion protein CusB TERM 3124 2418631 - 2418611 - G 84 -9 -4.36914 | gap 1, opp_overlap 2418627, overlap 2418614 TGTTTCGGCACAAAA CGACCGTCG TTGT CGACGG-CG ATCACCCGCTGTTCC TERM 3125 2418629 - 2418614 - G 71 -10.4 -3.1733 | opp_overlap 2418627, overlap 2418611 TTCGGCACAAAACGA CCGTCG TTGT CGACGG CGATCACCCGCTGTT TERM 3126 2419646 - 2419667 + g 91 -3.6 -5.61881 | CCTCCGACGATCATA CTGCCGAG AATAAG CGCGGTAG TTTTTATTTTTAAAG TERM 3127 2419762 - 2419737 - R 80 -9.7 -3.86897 | opp_overlap 2419726 2419725 GTTACGCGGGAGAAA TGCCCGCGCTT CTGT AAACCCGGGCA AGAACAAAGAGACAG CKO_02613 2420138 - 2419788 - | periplasmic copper-binding protein CKO_02614 2421582 - 2420167 - | copper/silver efflux system outer membrane protein CusC TERM 3128 2420658 - 2420641 - G 80 -4.8 -5.10497 | gap 1, overlap 2420642 2420643 AATGGAGGGAAAAAA GGCCGCG CGCGC CGCG-CC AATATTGGCATTCGC TERM 3129 2420743 - 2420755 + g 74 -3.3 -4.84527 | opp_overlap 2420736 CGAGGAAAGCGACGG CGGGA GCG TCACG TTTTTAATATCTCCG TERM 3130 2421791 - 2421778 - g 87 -2.3 -5.70829 | overlap 2421788 AAGACGAGAAAAAAA CCGGT GAAT ACCTG ACCAAAGGTCTGACG TERM 3131 2422192 - 2422167 - g 70 -5.4 -4.46212 | CTGGTTAGCAGAAAA GTGACCCGCA ACGGCA TGCGCATCAC GCTCACCAGTAAAGA CKO_02615 2421729 - 2422427 + | DNA-binding transcriptional activator CusR TERM 3132 2423682 - 2423658 - g 70 -7.1 -4.10161 | GATTACCGTTGAAAA TCCCGGCGC CCCCATT GCGCCAGAA CATTTACCGCGCCTG TERM 3133 2423823 - 2423835 + G 90 -10.5 -4.33248 | CGTAACGTCCGATCT GCGCG CAA CGCGC TTTATTCTGACATTG CKO_02616 2422417 - 2423868 + | sensor kinase CusS CKO_02619 2424304 - 2424143 - | hypothetical protein TERM 3134 2424668 - 2424679 + GH 75 -5.8 -4.60487 | CGCCATTTCTCCATT CTGG AACG CCAG TTTTTAAAGATGGTC CKO_02618 2424260 - 2424853 + | hypothetical protein TERM 3135 2425275 - 2425243 - g 90 -6.4 -5.24129 | opp_overlap 2425245 TCTCGTCAGAAAAAA TAGTGGCGAATT TTTATCAGC AAGTCGCCACTA TTACGCATTATCCCA TERM 3136 2425532 - 2425543 + G 77 -7.2 -4.33274 | opp_overlap 2425524, overlap 2425530 CAAAGAAGTGGCTGC CGCC CGCT GGCG TTTTAGTGGTCTGAA CKO_02620 2424969 - 2425757 + | hypothetical protein CKO_02621 2425777 - 2426499 + | hypothetical protein TERM 3137 2426510 - 2426524 + F 72 -2.9 -5.03145 | TTTAACACGCTAACC TCTTA AGCTA TAAGA TTTTTTAAGAAATTA CKO_02622 2427102 - 2427734 + | transcriptional regulator FimZ TERM 3138 2427745 - 2427769 + T 71 -10.8 -2.66106 | gap 1, overlap 2427743 2427741 TGTGATCGTGGCTGA CTCCCG-ACGA GAGA TCGTTCGGGAG TACGTTATTGGGATC TERM 3139 2427831 - 2427812 - T 70 -5 -4.48741 | TAATTGATCATAAAA GTCGCA TCCGCCTT TGCGAC TCCTGGCTGAACGCC CKO_02623 2428302 - 2427790 - | putative fimbrial protein TERM 3140 2428003 - 2428031 + g 81 -13.1 -3.14564 | GACCGCATCATCCAG CGCCAGCAGCG ACGTCCC CGCCGCTGGCG TTCCTGAAAAGGTCA CKO_02624 2429325 - 2428318 - | hypothetical protein TERM 3141 2428593 - 2428616 + g 72 -2.4 -4.96848 | gap 1 AGGCCTGCGCCGCGA CGTTCGTACAT TTT ATG-GCGACCG TTTTTGTCTGCGGCG TERM 3142 2428799 - 2428776 - G 80 -10.3 -3.89524 | gap 1 AGCTGATGGTATAAA CCGGCG-TGC TCAGG GCATCGCCGG TGCTGGTGGTGACAT TERM 3143 2428897 - 2428915 + g 72 -2.3 -4.90778 | AAAGATCAGCTTAGA GTCCATC ACGCC GAAGGGC TTTTGTTTCGGTACA CKO_02625 2431951 - 2429339 - | hypothetical protein TERM 3144 2429645 - 2429666 + g 71 -8 -3.79906 | opp_overlap 2429622 2429621 TACCAGCGCCCCTTG CGTCGGCA CCACGC TGCTGACG TTATTCTCCACATCG TERM 3145 2430620 - 2430643 + g 72 -11 -3.05596 | overlap 2430616 ACGCAGCGACTGCCC CTGGTGGGTG CTGT CATCCGCCAG TTGGCTGCGGGCGTG TERM 3146 2431543 - 2431521 - G 78 -6.2 -4.80167 | overlap 2431516 GAGGAAAAATCAAAA GCGATTTCAG CGC CGGGAATCGC CTCTGGCAAATTGAT TERM 3147 2431799 - 2431782 - G 74 -7.7 -4.07568 | overlap 2431792 TTGCCTTTCTCAAAA CGTGACA AATC TGCCACG GACGCAGCATCTGCC CKO_02626 2432675 - 2431983 - | hypothetical protein CKO_02627 2433253 - 2432720 - | hypothetical protein CKO_02628 2433949 - 2433329 - | hypothetical protein TERM 3148 2433550 - 2433569 + g 73 -9.2 -3.89346 | opp_overlap 2433550 2433553 CATTGTCACCAGACA CGACTGCC AGCA GGCTGTCG TTTGTACCGTCAGCC TERM 3149 2434547 - 2434523 - g 83 -7.7 -4.57073 | opp_overlap 2434539 GAGGTTGCTCAAAAA GTTCAGGCGCG TGT CGCGGCCGGAC TTCGCGCCCCAGGGT TERM 3150 2435292 - 2435278 - g 70 -7.1 -4.20932 | opp_overlap 2435280 2435280 AACACTTATCGAAAA CACGC TACAG GCGTG CGTTGAATATCACGA CKO_02629 2434457 - 2435323 + | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase CKO_02630 2435325 - 2435537 + | hypothetical protein CKO_02631 2437021 - 2435636 - | cysteinyl-tRNA synthetase CKO_02633 2437320 - 2437126 - | hypothetical protein CKO_02632 2437195 - 2437689 + | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 3151 2437727 - 2437762 + G 100 -10.5 -5.02074 | gap 1, opp_overlap 2437737, overlap 2437729 2437737 AGACCTTCACCTCTG CACGGAAGAACCGGCG ATCAC CGCCGGTT-TTCTGCG TTTTTTAGCCGGTGA TERM 3152 2437729 - 2437760 + G 72 -11.7 -2.75975 | gap 1, opp_overlap 2437737, overlap 2437727 2437737 ACCTTCACCTCTGCA CGGAAGAACCGGCG ATCAC CGCCGGTT-TTCTG CGTTTTTTAGCCGGT TERM 3153 2437753 - 2437737 - g 79 -11.5 -3.67597 | opp_overlap 2437737 2437729 2437727 CTCTGCACGGAAGAA CCGGCGA TCA CCGCCGG TTTTCTGCGTTTTTT TERM 3154 2437737 - 2437753 + G 95 -10.8 -4.58242 | opp_overlap 2437737, overlap 2437729 2437727 CTCTGCACGGAAGAA CCGGCG ATCAC CGCCGG TTTTCTGCGTTTTTT TERM 3155 2437919 - 2437933 + G 100 -10 -5.14563 | ACCCTGCTTCTTTAT TCACGG CAA CCGTGA TTTTTTGATCGGCAA TERM 3156 2438321 - 2438331 + G 77 -8.2 -4.17316 | opp_overlap 2438320 CGCTAACGGCAAACC CGCG TTC CGCG TTGTTTTAGGCGCCT CKO_02634 2437692 - 2438414 + | UDP-2,3-diacylglucosamine hydrolase CKO_02635 2438533 - 2439042 + | hypothetical protein TERM 3157 2439674 - 2439653 - g 78 -12.3 -3.21378 | gap 1, overlap 2439651 2439644 GAAACAGCAGGAACA GGCGGAG-GC CAT GCTCTCCGCC ATCATGCACGAACTG CKO_02636 2439039 - 2440106 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 3158 2440147 - 2440116 - f 84 -8.7 -4.70453 | opp_overlap 2440114 2440121, overlap 2440117 AAGTAATACATAAAA TGCCGGGAAAGGA ATCTTA TCCTTTTCCGGCT CCTCCTTCAGCGCGT TERM 3159 2440146 - 2440117 - f 85 -12.2 -3.40645 | opp_overlap 2440114 2440121, overlap 2440116 AGTAATACATAAAAT GCCGGGAAAGGA ATCTTA TCCTTTTCCGGC TCCTCCTTCAGCGCG TERM 3160 2440171 - 2440181 + F 76 -2.4 -5.33985 | AGCGCGTAAAATCCC CGTC ATT GCCG TTTGTTTTTTTTCAG TERM 3161 2440391 - 2440365 - g 76 -10.1 -3.86897 | gap 1 GGCACCTGTTACAAA CGCCAGGGGCCG GAAG CGGCAC-TGGCG TTGGGCCATAAACTC TERM 3162 2441252 - 2441229 - g 100 -13.2 -4.68655 | CAACTGGAAAAGAAA GCCGCGAAAA TCGT CTTTCGCGGC ATATGGCAGGACGTT CKO_02637 2440206 - 2441288 + | tRNA 2-selenouridine synthase CKO_02638 2442009 - 2441350 - | hypothetical protein CKO_02639 2443018 - 2442002 - | hypothetical protein TERM 3163 2442867 - 2442882 + g 80 -9 -4.07568 | opp_overlap 2442866 GTTAAGGCATTAAGG GTACGC AGCA GCGTAC TTTTCCCCGCGCCGC TERM 3164 2443058 - 2443041 - R 79 -8.4 -4.26189 | opp_overlap 2443040 2443039 TCAGAAATGCGAAAA GGGCAG TCGCCG CTGCCC CGTTAATTCCCTTGC CKO_02640 2443911 - 2443081 - | hypothetical protein TERM 3165 2443869 - 2443849 - G 82 -11.1 -3.80841 | ATTAGCATGAGCAAA TTGCAGGCC GCA GGCCAGCAA AAGCGCCCCGGCGGC CKO_02642 2444183 - 2443992 - | hypothetical protein TERM 3166 2444122 - 2444092 - Gg 100 -10.5 -5.04601 | gap 1, opp_overlap 2444102 2444119 GGCAGAAATGAAAAA GCCGGATAGCGGCA TAAA TGCCT-TATCCGGC CTGGACGCTCTATTA CKO_02641 2444024 - 2444164 + | hypothetical protein CKO_02643 2445426 - 2444206 - | hypothetical protein TERM 3167 2445435 - 2445417 - G 100 -8.8 -5.15969 | overlap 2445420 CGGCAACGTAAAAAA CAACGGGC ATA GCCCGCTA ACTATTTAGCAATTA TERM 3168 2445432 - 2445420 - G 95 -10.5 -4.67173 | overlap 2445417 CAACGTAAAAAACAA CGGGC ATA GCCCG CTAACTATTTAGCAA TERM 3169 2445470 - 2445486 + r 76 -4.3 -4.99972 | TTAACTGGTATTAAT CCTGTCG TGT TGGCGGG TTTTTAATGTTTTGT TERM 3170 2445633 - 2445605 - R 87 -9.7 -4.33675 | gap 1, opp_overlap 2445610 2445612 2445630, overlap 2445606 2445608 ATTATATTATTAAAA CTACACACCGGT ATAAAA ACCGGTGTGT-G ATCATCACATCTATA TERM 3171 2445633 - 2445606 - R 71 -9.9 -3.19482 | opp_overlap 2445610 2445612 2445630, overlap 2445605 2445608 TTATATTATTAAAAC TACACACCGGT ATAAAA ACCGGTGTGTG ATCATCACATCTATA TERM 3172 2445631 - 2445608 - R 81 -12.5 -3.15364 | opp_overlap 2445610 2445612 2445630, overlap 2445605 2445606 ATATTATTAAAACTA CACACCGGT ATAAAA ACCGGTGTG TGATCATCACATCTA CKO_02644 2448065 - 2445651 - | hypothetical protein TERM 3173 2446735 - 2446690 - G 74 -4.5 -4.72333 | gap 1 AAGGAGAGCGAAAAA GCCGAGAGCTG-GCTTAGCGTG GAC CACGGCTGGCGCAGCAGTCGGC TTACGGCCAGGCGCA TERM 3174 2447499 - 2447515 + g 74 -2.1 -5.03314 | CGTCACGCGACTTCC CGGCTGT ACT GCGCCCG TTTTTTCAACATCCG CKO_02645 2448748 - 2448062 - | putative ABC transporter ATP-binding protein YbbA TERM 3175 2448214 - 2448182 - G 81 -8.3 -4.30014 | GCGATTAAGCGAAAA CAGCAGGTCGGCGAT TTT ATCCCCGGTCTGCCG GTCAAGGTTTCCCGT CKO_02646 2448749 - 2449342 + | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 CKO_02647 2449371 - 2450141 + | short chain dehydrogenase TERM 3176 2450660 - 2450642 - g 74 -6.6 -4.25104 | GCTCTCTCATCAAAA CAGCGAGC TCG GCCTGCTG CTGGCGGAAACCCAG CKO_02648 2450202 - 2451056 + | hypothetical protein CKO_02649 2451908 - 2451129 - | hypothetical protein CKO_02650 2452572 - 2451895 - | putative ABC transporter ATP-binding protein YbbL CKO_02651 2452722 - 2453639 + | hypothetical protein CKO_02652 2453636 - 2454088 + | hypothetical protein CKO_02653 2454505 - 2454089 - | DNA-binding transcriptional regulator CueR TERM 3177 2455305 - 2455289 - g 90 -5 -5.1861 | opp_overlap 2455301, overlap 2455290 2455300 2455301 TTTATTACGAAAAAA GGCGGC GATAA GCCGCT TGGCGGAAGCGTCAA CKO_02654 2454788 - 2456914 + | hypothetical protein CKO_02655 2456917 - 2457741 + | hypothetical protein TERM 3178 2458985 - 2458953 - g 72 -11.2 -3.07816 | overlap 2458961 CCGTTACTGACCCAA TGGCACAACGCGGG GCTGA CCCGCGATGCGTCA ACCTGCCTGCGTCTG TERM 3179 2458977 - 2458961 - g 73 -10.8 -3.36968 | overlap 2458953 GACCCAATGGCACAA CGCGGG GCTGA CCCGCG ATGCGTCAACCTGCC CKO_02656 2457762 - 2459099 + | coproporphyrinogen III oxidase CKO_02657 2459112 - 2459606 + | hypothetical protein CKO_02658 2459606 - 2460229 + | hypothetical protein CKO_02659 2460268 - 2461272 + | hypothetical protein CKO_02660 2461269 - 2462039 + | hemin importer ATP-binding subunit TERM 3180 2462046 - 2462070 + F 75 -6.4 -4.53705 | overlap 2462047 GATCGGTAAAACTTG CGGAGCATCG AATGC TGATGCTCCA TTTTCTGTAACAATT TERM 3181 2462047 - 2462069 + F 73 -9.9 -3.315 | overlap 2462046 ATCGGTAAAACTTGC GGAGCATCG AATGC TGATGCTCC ATTTTCTGTAACAAT TERM 3182 2462400 - 2462432 + G 81 -4 -5.14563 | GATTTTGCGCTGTAT GGCCTCGCCGCAGG CATTA TCTTTGGCGACGTC TTTTTTCCTGAAGCC TERM 3183 2462861 - 2462875 + G 100 -10 -4.88405 | CGCCTTGCTAAGCTG GGGATG GCG CATCCC TTTTCTTTGCAGCTT CKO_02661 2462373 - 2463641 + | hypothetical protein TERM 3184 2463666 - 2463678 + F 72 -4.9 -4.68593 | overlap 2463649 ACGTGAGTTGCGCGT TCTTT ACC AAAGA TTTTTGGGTCATAAC TERM 3185 2464517 - 2464474 - gf 83 -10.3 -3.75332 | gap 1, opp_overlap 2464473 2464475 2464479, overlap 2464507 ATGTTGCAAGGTAAA CCACCGCGCGCGCTGTTCGC AACCA ACGAACAGCAGGCGCT-TGG CTGTTTACGCGCTCT TERM 3186 2464479 - 2464513 + GF 77 -11.4 -3.24021 | opp_overlap 2464474 2464507, overlap 2464473 2464475 GCAAGGTAAACCACC GCGCGCGCTGTTCG CAACCAA CGAACAGCAGGCGC TTGGCTGTTTACGCG CKO_02662 2464000 - 2464779 + | hypothetical protein CKO_02663 2464754 - 2465773 + | hypothetical protein TERM 3187 2465856 - 2465839 - g 70 -2.7 -4.72272 | TTTCTGGAGGAAAAA TGAATAC GTTA GCACTCA TCCTCTCTGGTGAAG TERM 3188 2466211 - 2466223 + G 80 -4.7 -5.1244 | opp_overlap 2466211, overlap 2466188 CTGGCATAGGAATTA CCAGC GGA GCCGG TTTTTATCTTCATGC TERM 3189 2466322 - 2466311 - g 91 -3.6 -5.72622 | TTTACAAACAAAAAA CCAG CTCC CCGG CAAAGTAAAAATCCG CKO_02664 2465838 - 2466551 + | hypothetical protein TERM 3190 2466832 - 2466821 - g 71 -7.2 -4.06533 | GAAACCATTAAACAA GCCG GTTA CGGC GCGGAGTTAAGCCAC TERM 3191 2468616 - 2468564 - g 83 -9.5 -4.19817 | GCGATTGACGGAAAA GCCGCGGCGCTGCTGGCGATCCGCG ATC CGCTGCGCAGCGACAGCGTCGCAGC GCTTCAGCGCCTGCA CKO_02665 2466647 - 2469148 + | copper exporting ATPase TERM 3192 2469162 - 2469210 + F 79 -8.9 -4.18494 | gap 1, opp_overlap 2469206, overlap 2469164 2469197 AAGGCGCCTGCGCTA ACG-CTTATCCGGCCTACGCAG CACTCT CATCGTAGGCCGGATAAGATGC TTTTGCGTCGCCATC TERM 3193 2469164 - 2469207 + F 85 -13.9 -3.11208 | opp_overlap 2469206, overlap 2469162 2469197 GGCGCCTGCGCTAAC GCTTATCCGGCCTACGCAG CACTCT CATCGTAGGCCGGATAAGA TGCTTTTGCGTCGCC TERM 3194 2469791 - 2469750 - g 87 -8.1 -4.62904 | gap 1, opp_overlap 2469757, overlap 2469762 AAACAGGCGCAAAAA CCGATC-ATCGAACTGGAAG GCG CTTCCAGCCAGATCGATCTG CTGTGCCAGCTCCCT CKO_02666 2469321 - 2470085 + | hypothetical protein TERM 3195 2470112 - 2470091 - f 90 -7.3 -5.41746 | overlap 2470092 AATGCGTTAAAAAAA TGGCCAATA TTTC TATTGGCCC GTCAAAGAGGAATTT TERM 3196 2470111 - 2470092 - f 84 -10.8 -3.83963 | overlap 2470091 ATGCGTTAAAAAAAT GGCCAATA TTTC TATTGGCC CGTCAAAGAGGAATT TERM 3197 2470144 - 2470162 + F 79 -10.2 -3.56558 | ATCGTTATTATTATG CCAGGACG TAG CGCCCTGG TTATGTCGATTGTCG TERM 3198 2470182 - 2470222 + F 76 -4.2 -5.00616 | opp_overlap 2470184 2470188, overlap 2470184 2470188 GTCGATTGTCGCTCA AAGTCACCATCCTGC-CAAT ACT ATTGCGCAAGATGGT-ACTA TTTTTTAGACCACCA TERM 3199 2470220 - 2470184 - f 72 -9 -3.53444 | opp_overlap 2470182 2470184 2470188, overlap 2470188 CGATTGTCGCTCAAA GTCACCATCCTGC-CAAT ACT ATTGCGCAAGATGGT-AC TATTTTTTAGACCAC TERM 3200 2470184 - 2470220 + F 71 -6.8 -4.13561 | opp_overlap 2470184 2470188, overlap 2470182 2470188 CGATTGTCGCTCAAA GTCACCATCCTGC-CAAT ACT ATTGCGCAAGATGGT-AC TATTTTTTAGACCAC TERM 3201 2470217 - 2470188 - f 73 -10.9 -2.64155 | gap 1, opp_overlap 2470184 2470182 2470188, overlap 2470184 TGTCGCTCAAAGTCA CCATCCTGC-CAAT ACT ATTGCGCAAGATGG TACTATTTTTTAGAC CKO_02668 2470286 - 2470765 + | hypothetical protein CKO_02669 2472499 - 2470847 - | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 3202 2472279 - 2472262 - G 70 -9.1 -3.62096 | opp_overlap 2472272 TGTCACCACCGGAAA GCAGCAG CACG CTGCCGC CTTCAGCCGCAACCT CKO_02670 2472674 - 2473894 + | hypothetical protein TERM 3203 2473900 - 2473928 + F 70 -9.6 -3.08813 | TAAAGCCTGATTTTC CTGCGGCCAAAG GTAAA CTTTGGTCGCAC TCTCTTCCAGTCACC TERM 3204 2474434 - 2474488 + G 72 -12.2 -2.74248 | gap 3, opp_overlap 2474428 2474429 2474462, overlap 2474433 2474486 GGCGGTAAAGGCCAT CGCCATTCCCGGC-GCGATCGCC-CAG ATAG CCGTGGCGA-CGTTGCTGGGTATGGCG CTTTCAGCGGTGTTG TERM 3205 2474924 - 2474934 + G 83 -8.2 -4.41616 | TTCGATGTTTCCTTT GCGC TGG GCGC TTTCTTTGCCGGGAT CKO_02671 2474174 - 2475850 + | putative cation:proton antiport protein TERM 3206 2475854 - 2475897 + T 71 -3.9 -4.77165 | gap 2, opp_overlap 2475852 2475881, overlap 2475855 GTAACGGGTTAAACG GCGTGATGCCGGATGGCGGTG TAAT CACC-TTATCCGGCCT-ACGA TTTTCTTGTAGGCCC CKO_02672 2477245 - 2475941 - | hypothetical protein TERM 3207 2476314 - 2476335 + g 77 -7.9 -4.37198 | overlap 2476311 AACTCGGCAATCGCC CCCGGCAGC AGCG GGTGCTGGG TTTTGCGTTTCGCTT TERM 3208 2477949 - 2477973 + G 72 -12.1 -2.69406 | overlap 2477946 2477951 TAAGCAGATTGTATG CGGGAGCGTGG TCG CCACGCTGCTG TGGTATGGTCTCTAC TERM 3209 2477951 - 2477971 + G 71 -11.1 -2.88708 | overlap 2477949 2477946 AGCAGATTGTATGCG GGAGCGTGG TCG CCACGCTGC TGTGGTATGGTCTCT CKO_02673 2477371 - 2478357 + | acetyl esterase CKO_02674 2479433 - 2478360 - | ferrochelatase TERM 3210 2478392 - 2478437 + g 82 -5.5 -5.00616 | overlap 2478387 2478395 2478398 2478400 2478402 TCAGCTTCAGCATCA TATCGATGTGTTCCGGCGC GGCATTGA GCGCCGGAATGTATTCGTA TTTTTTACCGCCCGC TERM 3211 2478395 - 2478435 + g 77 -8.4 -4.13561 | gap 1, overlap 2478387 2478392 2478398 2478400 2478402 GCTTCAGCATCATAT CGA-TGTGTTCCGGCGC GGCATTGA GCGCCGGAATGTATTCG TATTTTTTACCGCCC TERM 3212 2478398 - 2478431 + g 70 -8.9 -3.66995 | overlap 2478387 2478395 2478392 2478400 2478402 TCAGCATCATATCGA TGTGTTCCGGCGC GGCATTGA GCGCCGGAATGTA TTCGTATTTTTTACC TERM 3213 2478402 - 2478427 + g 78 -11.9 -3.23466 | overlap 2478400 2478398 2478395 2478392 CATCATATCGATGTG TTCCGGCGC GGCATTGA GCGCCGGAA TGTATTCGTATTTTT TERM 3214 2479441 - 2479410 - G 74 -10.2 -3.52787 | gap 1, opp_overlap 2479411, overlap 2479411 GAGGTAAGATGAGAA TTTGCCCGATAAGCG CAG CGC-CATCGGGCAAT TTACGGATTAACCGA TERM 3215 2479411 - 2479440 + g 77 -11.5 -3.60792 | gap 1, opp_overlap 2479411 2479410 AGGTAAGATGAGAAT TTGCCCGATAAGCG CAG CGCC-ATCGGGCAA TTTACGGATTAACCG TERM 3216 2479440 - 2479411 - G 79 -13.7 -2.7119 | gap 1, opp_overlap 2479411, overlap 2479410 AGGTAAGATGAGAAT TTGCCCGATAAGCG CAG CGC-CATCGGGCAA TTTACGGATTAACCG CKO_02675 2480093 - 2479449 - | adenylate kinase TERM 3217 2480266 - 2480239 - R 95 -2.6 -5.86976 | gap 1, overlap 2480240 GGATAAAATAAAAAA TGCCCAAT-GGCG CTG CGCTTATCGGGCC TACATAAGCAACCTG CKO_02676 2482205 - 2480331 - | heat shock protein 90 TERM 3218 2480664 - 2480687 + g 70 -3.1 -4.7153 | gap 1 CAGCAGGGTTTTCAC GCGCTCAACG AACGG CGTC-AGCGC TTTTTCCGCTTCTTT TERM 3219 2481079 - 2481095 + g 73 -5.1 -4.60487 | overlap 2481081 ACCAGACCAAACTGT TTCCAGA AGG TCTGGTA TTTTTCCGCATCGTC TERM 3220 2482286 - 2482309 + r 95 -13.2 -3.90112 | opp_overlap 2482277 AAATGAGTTTTCAAG CGGGAGAACG CGAA TGTTCTCCCG TTTGATTAAAAACGA CKO_02677 2482920 - 2482315 - | recombination protein RecR TERM 3221 2482840 - 2482884 + g 100 -20.8 -3.06915 | gap 1, opp_overlap 2482827 2482835 2482834, overlap 2482827 2482883 CAGCGTAAACGCCAT GCGCTGCGCTGACT-TCGGGC CAAC GCCCGGCAGACAGCGCAGTGC TTCCATAAGCTGAGT CKO_02678 2483249 - 2482920 - | hypothetical protein TERM 3222 2483176 - 2483188 + g 89 -3.4 -5.49234 | TTGGCGATTTCTTCC TGCA TCTGC TGCA TTTTTTCTTGCATCT TERM 3223 2483294 - 2483276 - R 73 -9.6 -3.30124 | CTTGATGGTTTACAA TCGCAAGC CGG GCTTACGA TCAAATGGGGCGAAT CKO_02679 2485220 - 2483295 - | DNA polymerase III subunits gamma and tau TERM 3224 2483788 - 2483804 + g 77 -7.9 -4.24413 | overlap 2483785 ACCACCGGATTGGTC GCCTTCC AGC GGTAGGC TTCTTTCTTCGTCGG TERM 3225 2483903 - 2483930 + g 73 -10.5 -3.37016 | gap 1, overlap 2483913 2483915 2483917 GCGCAGCGTTATTTA CCGGCCGCGCGC GGGAA GCG-GCTGCCGG TTCACTCTTTTTTGT TERM 3226 2483913 - 2483937 + g 100 -4.1 -5.85244 | overlap 2483903 2483915 2483917 ATTTACCGGCCGCGC GCGGGAAGCGG CTG CCGGTTCACTC TTTTTTGTTTTGGTT TERM 3227 2483915 - 2483935 + g 73 -5.3 -4.53077 | overlap 2483903 2483913 2483917 TTACCGGCCGCGCGC GGGAAGCGG CTG CCGGTTCAC TCTTTTTTGTTTTGG TERM 3228 2485264 - 2485301 + r 76 -8.5 -4.15222 | gap 1, opp_overlap 2485271 2485274 ATTCATGGGGGGAAT GCTAACACAACCTCGC AAATACA GCGAGGTTGTGA-GGC TTTATTCGCGACGCT TERM 3229 2485295 - 2485271 - R 75 -11.5 -3.09492 | opp_overlap 2485264, overlap 2485274 GGGGGAATGCTAACA CAACCTCGC AAATACA GCGAGGTTG TGAGGCTTTATTCGC CKO_02680 2485961 - 2485410 - | adenine phosphoribosyltransferase TERM 3230 2486107 - 2486118 + r 71 -3.6 -4.89562 | GCAACAGCGATTATT GCGC TTCA GTGC TTTTGTTGCTTTTCA CKO_02681 2486489 - 2486112 - | hypothetical protein TERM 3231 2486282 - 2486295 + g 70 -6.7 -4.11216 | opp_overlap 2486260, overlap 2486260 GTTTCGCCCCCGGCG GCATC GCGC GATGC TTTTGCCAGTGACGC CKO_02682 2486571 - 2487086 + | primosomal replication protein N'' CKO_02685 2487296 - 2487129 - | hypothetical protein CKO_02683 2487101 - 2487268 + | hypothetical protein CKO_02684 2487296 - 2488285 + | hypothetical protein TERM 3232 2488315 - 2488291 - T 100 -17.9 -3.02471 | CTCCCATTAGAGACA CTCAGGGCGGC CTG GCCGCCCTGAA CAGAACTTAGCCCAC TERM 3233 2488335 - 2488351 + T 79 -9.3 -4.08919 | ACTTAGCCCACCGAC GGCGTCG GAT CGTCGCC TTTGATTTCGCGTTT CKO_02686 2491684 - 2488322 - | potassium efflux protein KefA TERM 3234 2491160 - 2491175 + g 70 -6.8 -4.08216 | CTGCATTTGCTGCGA CGCGGT ATAC ATCGCG TTTTGCACACGCTCA TERM 3235 2491361 - 2491380 + g 76 -3.4 -5.00884 | overlap 2491362 GCTGAGGGCATTCAG CGCGTCCG TCGC CTGACGCA TTTTTTCCGGCGCCT CKO_02687 2492457 - 2491804 - | DNA-binding transcriptional repressor AcrR TERM 3236 2492628 - 2492610 - g 90 -6 -5.17744 | opp_overlap 2492620 ACATATGAACAAAAA CAGAGG GTTTACG CCTCTG GCGGTCGTTCTGATG CKO_02688 2492599 - 2493792 + | hypothetical protein TERM 3237 2493941 - 2493902 - g 71 -10 -3.57144 | CTCGCGATCCTCAAA CTGCCGGTAGCGCAAT ATCCAACG ATTGCGCCGCCCGCAG TGACGATCTCCGCGA TERM 3238 2493995 - 2493981 - g 74 -7.8 -4.13767 | overlap 2493993 GCGCTGATGCGAAAA CCGTGC AGG ACACGG TAACGCAGGTTATCG TERM 3239 2494312 - 2494345 + G 73 -8.9 -3.91084 | CATGAAAGACGCCAT CAGCCGTACGTCA GGTGTGGG TGACGTGCAGCTG TTTGGTTCGCAGTAC CKO_02689 2493815 - 2496961 + | hypothetical protein TERM 3240 2496979 - 2496994 + F 100 -11.8 -5.28176 | opp_overlap 2496979 CATCTCCTGTGAAAA GGCCGC GCAA GCGGCC TTTTTTCTGGATAAA TERM 3241 2496994 - 2496979 - f 95 -11.8 -4.07885 | opp_overlap 2496979 CATCTCCTGTGAAAA GGCCGC GCAA GCGGCC TTTTTTCTGGATAAA CKO_02690 2497463 - 2497837 + | hypothetical protein CKO_02691 2497865 - 2498083 + | hemolysin expression-modulating protein CKO_02692 2498267 - 2498818 + | maltose O-acetyltransferase CKO_02693 2498844 - 2498969 + | hypothetical protein CKO_02694 2498905 - 2499402 + | hypothetical protein TERM 3242 2499452 - 2499429 - T 93 -10.3 -4.70659 | opp_overlap 2499429 TTGCAGATGTAAAAA GTGCGTACC GTCCCT GGCACGCAC TGTAGTCCCTGCAAT CKO_02695 2499641 - 2499480 - | hypothetical protein CKO_02696 2499882 - 2499622 - | 50S ribosomal protein L31 type B TERM 3243 2499680 - 2499695 + g 95 -3.2 -5.79595 | overlap 2499690 AAACGTGCTGCGCTG CCTTCG TTAT CAAAGG TTTTTTGTTTTCCGG CKO_02697 2500123 - 2501658 + | hypothetical protein TERM 3244 2501663 - 2501696 + T 70 -9.6 -3.09516 | gap 2, opp_overlap 2501662 2501661 AACGGATTTAGAATG GGGAC-GGCTG-GCGG CACG CCGCACAGCCTGTCGC TTCAGTCATCCAGAA CKO_02698 2502051 - 2501698 - | hypothetical protein TERM 3245 2502069 - 2502106 + r 72 -8.5 -3.71487 | overlap 2502073 GAAAAACCTCCGAAG CGTACTG-CGCGGCAAG CCAATT CTGGCCGCGTCAGT-CG TTGTTAAGTCTAGTC CKO_02699 2502745 - 2502131 - | hypothetical protein TERM 3246 2502918 - 2502946 + G 74 -9.5 -3.71848 | TACTCCTGTCTGGCG TCAGCTGGCGGAG GCC CTGCGTCTGCTGA TTCTTGATGGCCGAC TERM 3247 2503886 - 2503911 + G 84 -8.9 -4.24342 | overlap 2503872 AGCAGTTAGCGACCG GCTGGCTGCTT GATA ATGCCGCCAGC TTTCTTCCTGACAGA TERM 3248 2504237 - 2504214 - g 70 -9.6 -3.34962 | GCCGATATGGGACAA CCTGCGCT CACAAAAC AGCGCAGG GAAAATACGCAAAAT CKO_02700 2502832 - 2504259 + | hypothetical protein CKO_02701 2504495 - 2504280 - | hypothetical protein CKO_02702 2504743 - 2504492 - | hypothetical protein TERM 3249 2504673 - 2504693 + g 80 -9.7 -3.96506 | AAGTTCTCATTATTT GCTTCGGCA TAA TGGCGAAGC TTCTCTTTTAACGTC CKO_02704 2505193 - 2505507 + | hypothetical protein TERM 3250 2505505 - 2505530 + T 83 -14.1 -2.62933 | opp_overlap 2505508, overlap 2505508 TATCGCTGGATTTAT TAACCCTCTCC GGCC GGAGAGGGTTG TCCTGTGAGAGCTTA TERM 3251 2505527 - 2505508 - T 86 -13.6 -3.18264 | opp_overlap 2505505 2505508 CGCTGGATTTATTAA CCCTCTCC GGCC GGAGAGGG TTGTCCTGTGAGAGC TERM 3252 2505508 - 2505527 + T 90 -13.6 -3.46602 | opp_overlap 2505508, overlap 2505505 CGCTGGATTTATTAA CCCTCTCC GGCC GGAGAGGG TTGTCCTGTGAGAGC CKO_02705 2506112 - 2505543 - | hypothetical protein TERM 3253 2505926 - 2505938 + g 73 -9.1 -3.86897 | TCAGTACGGCATCCG GTGGC AGG GCCAC TTTCTGACGGATCCA CKO_02706 2506328 - 2507188 + | acyl-CoA thioesterase II TERM 3254 2507191 - 2507230 + T 100 -22.2 -3.21218 | opp_overlap 2507192 2507193, overlap 2507193 2507226 CAATCGCAATTGAAA ATGGCCGAATGGCGACGC AAAA GCGTCGCCATTCGGCCTG TTGATGATCAGGCGT TERM 3255 2507229 - 2507192 - T 100 -25.7 -4.28432 | opp_overlap 2507191 2507193 2507226, overlap 2507193 AATCGCAATTGAAAA TGGCCGAATGGCGACGC AAAA GCGTCGCCATTCGGCCT GTTGATGATCAGGCG TERM 3256 2507193 - 2507228 + T 100 -29.2 -3.17051 | opp_overlap 2507193 2507192, overlap 2507191 2507226 ATCGCAATTGAAAAT GGCCGAATGGCGACGC AAAA GCGTCGCCATTCGGCC TGTTGATGATCAGGC TERM 3257 2507228 - 2507193 - T 100 -29.2 -3.16336 | opp_overlap 2507191 2507193 2507226, overlap 2507192 ATCGCAATTGAAAAT GGCCGAATGGCGACGC AAAA GCGTCGCCATTCGGCC TGTTGATGATCAGGC CKO_02707 2508542 - 2507238 - | ammonium transporter CKO_02708 2508894 - 2508556 - | nitrogen regulatory protein P-II 2 CKO_02709 2508921 - 2509130 + | hypothetical protein TERM 3258 2509163 - 2509140 - T 77 -10.2 -3.30124 | opp_overlap 2509155 CCGTAGGCCTGATAA GCGCAGCACC ATCA GGCGCTGAGC GATTCCTCACGCGCG CKO_02710 2510929 - 2509151 - | putative multidrug transporter membrane\ATP-binding components CKO_02711 2512631 - 2510922 - | putative multidrug transporter membrane\ATP-binding components TERM 3259 2511381 - 2511408 + g 76 -10.6 -3.61715 | gap 1 TTCAATCTCTTCCTG CGTCGCGTTTGGG CGC CCCA-GCGCGATG TTATTGCCGACCGTG TERM 3260 2512597 - 2512571 - G 84 -13 -3.36327 | overlap 2512572 TGACGCCATCCACAA CGATCCCGACCA CTT TGGGCGGGATCA GCTGAAGGACAGCGA TERM 3261 2512596 - 2512572 - G 81 -14.3 -2.61582 | overlap 2512571 GACGCCATCCACAAC GATCCCGACCA CTT TGGGCGGGATC AGCTGAAGGACAGCG CKO_02712 2513197 - 2512739 - | hypothetical protein TERM 3262 2513372 - 2513350 - g 76 -9.2 -3.95852 | overlap 2513354 ACGCCATTAATGAAA TTAACGCTGA CTA TCAGCGTTCA GCCGACACGCATCTG TERM 3263 2513368 - 2513354 - g 74 -10 -3.62539 | overlap 2513350 CATTAATGAAATTAA CGCTGA CTA TCAGCG TTCAGCCGACACGCA CKO_02713 2513310 - 2514365 + | hypothetical protein TERM 3264 2514400 - 2514380 - T 100 -9.7 -5.61596 | opp_overlap 2514380 AGCGGCATAAAAAAA GCCAGGC TTTACGG GCCTGGC TTGCTGGAAAGGATC TERM 3265 2514380 - 2514400 + T 77 -11.1 -3.14344 | opp_overlap 2514380 AGCGGCATAAAAAAA GCCAGGCTT TAC GGGCCTGGC TTGCTGGAAAGGATC CKO_02714 2515248 - 2514418 - | hypothetical protein TERM 3266 2515422 - 2515434 + G 70 -3.3 -4.82901 | TCACCGTTGGGGAAC TGGCG GAG CGCTG TTTTTGTAGCGAACG TERM 3267 2516399 - 2516384 - g 77 -4 -5.03314 | gap 1, overlap 2516393 2516397 CTGACGCTTAAAAAA GGCTCGA AAC TC-AGCC TGCAACAGGCGCGTC CKO_02715 2515337 - 2517073 + | hypothetical protein TERM 3268 2517063 - 2517075 + F 91 -7.7 -5.2197 | GCGGCCATCCGCAGG CGCTA CCA TAGCG TTTTTCGTTTTTGTC CKO_02716 2517101 - 2517796 + | queuosine biosynthesis protein QueC CKO_02717 2518303 - 2517905 - | hypothetical protein CKO_02718 2518770 - 2518396 - | hypothetical protein TERM 3269 2518621 - 2518657 + g 87 -8 -4.55295 | gap 1, overlap 2518607 GGCCTTTGCAGGTAC GGAGGCTTTAGTCTGCG CGGA CGCAGAC-GAATCCGCC TTTGTTTGTACCACC TERM 3270 2518857 - 2518872 + r 86 -11.8 -3.60792 | opp_overlap 2518857 ATCAGAAATGGAAAA GGCCGC GAAG GCGGCC TTTGAGGGTTACAAC TERM 3271 2518872 - 2518857 - R 100 -11.8 -4.40173 | opp_overlap 2518857 ATCAGAAATGGAAAA GGCCGC GAAG GCGGCC TTTGAGGGTTACAAC CKO_02719 2520791 - 2518920 - | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 3272 2519002 - 2519033 + g 81 -2.2 -5.36965 | gap 1 TCAAAGGTAATCTGC GCG-TTATTCTGGGT AAT ACCCTGAACCATCGC TTTTTTCTGCTCTTC TERM 3273 2519771 - 2519786 + g 85 -4.6 -5.27335 | opp_overlap 2519771, overlap 2519772 CAGAAGATTTAATCA CGCCAG ACAG CTGGCC TTTTTCTTTCAGACC TERM 3274 2520979 - 2520960 - R 100 -10 -5.72622 | opp_overlap 2520960 2520959 TGGACAAATAAAAAA GGCACATC AGAT GATGCGCC CTTGTACTTTGTCAC CKO_02720 2521287 - 2521015 - | transcriptional regulator HU subunit beta TERM 3275 2521432 - 2521467 + r 70 -2.5 -5.07486 | gap 1, opp_overlap 2521435, overlap 2521434 2521435 ATTAGCTATACAAAA AAAGGCTGGCA-AGCA CGAAA TGCCCTGCCAGCCCTG TTTTTCTTAGCGCTA TERM 3276 2521464 - 2521435 - R 100 -11.5 -5.72616 | gap 1, opp_overlap 2521434 2521432 2521435 AGCTATACAAAAAAA GGCTGGCA-AGCAC GAA ATGCCCTGCCAGCC CTGTTTTTCTTAGCG CKO_02721 2523851 - 2521497 - | DNA-binding ATP-dependent protease La TERM 3277 2521601 - 2521628 + g 74 -7 -4.30719 | opp_overlap 2521601, overlap 2521625 CCAGATCGGCAATAA CGTTGTCTGGAA TCTC TTCCAGATCGCG TTTATTCTCAAACGG TERM 3278 2521856 - 2521868 + g 76 -5.5 -4.72986 | CTTCCGGTACGTGAA CGTGG ATG TCACG TTTTTCGTAAAAGTC TERM 3279 2522663 - 2522680 + g 74 -7.7 -4.08144 | gap 1, opp_overlap 2522652, overlap 2522676 TAGAGCCGATGTATG TCCGGCGG TGG CCG-CGGA TTTCTGCTTCATCAC TERM 3280 2522900 - 2522916 + g 80 -9.4 -4.17355 | opp_overlap 2522898, overlap 2522905 2522915 CTGTGTCGAGAATTT CCTGCG CCTGA CGCAGG TCTTTTTTGACCTTG TERM 3281 2522905 - 2522918 + g 76 -3.1 -5.10029 | gap 1, opp_overlap 2522898, overlap 2522900 2522915 TCGAGAATTTCCTGC G-CCTG ACG CAGGTC TTTTTTGACCTTGCT TERM 3282 2523399 - 2523409 + g 95 -3.2 -5.80364 | GAGCGACGTCAGCAC TTCC GGT GGGA TTTTTTTGTTCAGCT TERM 3283 2523682 - 2523703 + g 89 -2.9 -5.67967 | overlap 2523685 TCATCCGTTGATGCT TCTTTCTGG GCGA CCAGCATGA TTTTTTTATCATGGT TERM 3284 2524008 - 2523980 - R 89 -8.9 -4.66163 | opp_overlap 2523986, overlap 2523985 2523986 ATGTTTACGGAAAAA TAAAAGGGGGGAT AAA ATCCCCCTTTTTC GTTAACTGATTGTAT TERM 3285 2524003 - 2523985 - R 100 -8.8 -5.2853 | opp_overlap 2523986, overlap 2523980 2523986 TACGGAAAAATAAAA GGGGGGAT AAA ATCCCCCT TTTTCGTTAACTGAT TERM 3286 2524002 - 2523986 - R 93 -12.3 -3.75491 | opp_overlap 2523986, overlap 2523985 2523980 ACGGAAAAATAAAAG GGGGGAT AAA ATCCCCC TTTTTCGTTAACTGA TERM 3287 2523986 - 2524002 + r 100 -12.3 -4.88407 | opp_overlap 2523985 2523980 2523986 ACGGAAAAATAAAAG GGGGGAT AAA ATCCCCC TTTTTCGTTAACTGA CKO_02722 2525309 - 2524035 - | ATP-dependent protease ATP-binding subunit CKO_02723 2526170 - 2525439 - | hypothetical protein TERM 3288 2526249 - 2526276 + r 79 -11.2 -3.35327 | opp_overlap 2526251, overlap 2526251 ATGCGTGACAAAAAA AAGCCCGCCACC TGGA GGTGACGGGCTC TTGTGCGAATTTCGT TERM 3289 2526251 - 2526274 + r 86 -13.8 -3.24161 | opp_overlap 2526251, overlap 2526249 GCGTGACAAAAAAAA GCCCGCCACC TGGA GGTGACGGGC TCTTGTGCGAATTTC TERM 3290 2526274 - 2526251 - R 100 -16 -5.93809 | opp_overlap 2526251 2526249 GCGTGACAAAAAAAA GCCCGCCACC TGGA GGTGACGGGC TCTTGTGCGAATTTC CKO_02724 2527607 - 2526309 - | trigger factor TERM 3291 2527769 - 2527748 - R 86 -9.4 -4.41633 | opp_overlap 2527747 2527748 2527750 CATTCCGAAAAATAA GACGCCGC ATTATA GCGGCATC ACTTTTATGAGTCGA TERM 3292 2527900 - 2527877 - R 93 -9.6 -4.59984 | opp_overlap 2527882, overlap 2527882 AAAATTCAGACAAAA CAAAACGGCC CGCA GGCCGTTTTC ACATAATCTGTAGCA TERM 3293 2527882 - 2527895 + r 83 -9.5 -4.16279 | opp_overlap 2527877 2527882 TCAGACAAAACAAAA CGGCC CGCA GGCCG TTTTCACATAATCTG TERM 3294 2527895 - 2527882 - R 100 -9.5 -5.23292 | opp_overlap 2527882, overlap 2527877 TCAGACAAAACAAAA CGGCC CGCA GGCCG TTTTCACATAATCTG CKO_02725 2528272 - 2527955 - | transcriptional regulator BolA TERM 3295 2528138 - 2528118 - G 74 -4.6 -4.71426 | TGGCGATTAAGAAAA CGTTCGCC AGTGA AGCGATCG CTGACCAGCACAACC CKO_02726 2528550 - 2528419 - | hypothetical protein CKO_02727 2528577 - 2529155 + | hypothetical protein TERM 3296 2529830 - 2529850 + G 80 -4.7 -5.00616 | gap 1, opp_overlap 2529816 ACGCTGGAACAGGCG GTCGCCGC TCCGCT GCG-CGAC TTTTTTGGCCGCAAC CKO_02728 2529194 - 2530675 + | muropeptide transporter TERM 3297 2531599 - 2531614 + G 73 -6 -4.42806 | opp_overlap 2531591 AATGAAATCGCCTTC CCGGCG AACA CTCCGG TTTATTTCAAAGTGA CKO_02729 2531134 - 2532081 + | cytochrome o ubiquinol oxidase subunit II TERM 3298 2532342 - 2532357 + G 71 -10.4 -3.31144 | overlap 2532352 CCATCATGATGCGTA GCCAGC AGGC GCTGGC TTCTGCGGGTGAAGC TERM 3299 2534047 - 2534036 - g 75 -5.8 -4.66833 | opp_overlap 2534035 CCGGAAGTCGAAAAA CTGG AAAA CCAG CATTTCGATGAGATT CKO_02730 2532101 - 2534092 + | hypothetical protein TERM 3300 2534247 - 2534228 - g 71 -12.2 -2.52464 | TCTGTTCGCAACCTA TGCCGTTC TGGT GAACGGCA CCGCAGGCGGCCCGA CKO_02731 2534082 - 2534702 + | cytochrome o ubiquinol oxidase subunit III CKO_02732 2534702 - 2535031 + | cytochrome o ubiquinol oxidase subunit IV CKO_02733 2535043 - 2535933 + | protoheme IX farnesyltransferase TERM 3301 2535957 - 2535987 + F 100 -12.7 -4.69053 | gap 1 CCGCAACAAATCTTC TGCCGGATGGAGGC TTAC GCCT-TATCCGGCA TTTTATTGCCTGATA TERM 3302 2536172 - 2536184 + G 71 -7.7 -3.99324 | TGTATTTTCTTTGCG CATGC TTG GCATG TTTATGGTCCTGCCG TERM 3303 2536271 - 2536287 + G 74 -7.9 -4.11394 | TGCTATCGGTATTTA CGGCCTG GCG CAAGCCG TTTTCCAGATCCCCT TERM 3304 2537329 - 2537341 + G 70 -9.1 -3.73224 | opp_overlap 2537337 TTGCCGCCGATGACG CGCTG AAA CAGCG TTTGCTGGCGACTGA CKO_02734 2536101 - 2537465 + | hypothetical protein TERM 3305 2537478 - 2537490 + T 77 -10.5 -3.30124 | opp_overlap 2537469 2537470 TGAGAAGTGCCGGAT GGCGG CTA CCGCC TTATCCGGCCTACAA CKO_02735 2538048 - 2537557 - | nucleotide-binding protein TERM 3306 2538982 - 2538971 - gH 77 -7.2 -4.2828 | overlap 2538972 GGTTATTTATTAAAA CGCG CCCG CGCG CATGGCATCGCCGTC CKO_02736 2538173 - 2539084 + | 2-dehydropantoate 2-reductase CKO_02737 2539047 - 2539637 + | hypothetical protein CKO_02738 2541191 - 2539743 - | thiamine biosynthesis protein ThiI TERM 3307 2540491 - 2540479 - G 70 -5.5 -4.38712 | overlap 2540480 TTGATGGCGACAAAA CGCAC GCG ATGCG AACTGCCAAAGCGGT TERM 3308 2540990 - 2541018 + g 88 -9.5 -4.39166 | TGCCCGGAATACGGG TCAGCGCGTCGCG AAT CGCCAGGCGTTGA TTTTCATCTCTGGCG CKO_02739 2541387 - 2541629 + | exodeoxyribonuclease VII small subunit CKO_02740 2541630 - 2542529 + | geranyltranstransferase TERM 3309 2543568 - 2543532 - g 73 -10.3 -3.41569 | gap 1, overlap 2543530 2543556 2543557 CGAGCTATTCAAAGA TCTTTGGCGACTGGCT GTGCGA AACC-GCCGCCAAAGA CAGCAAGCTGATGGC TERM 3310 2544048 - 2544035 - g 71 -4.5 -4.56775 | overlap 2544036 ACGCCGCTGGAAAAA CTGCC GATC GGCAA AGGACTCGTCAAACG CKO_02741 2542562 - 2544424 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 3311 2545007 - 2544997 - g 78 -6.8 -4.56597 | CTGGCGCTGCAAAAA CAGC ACG GCTG GGCGCAGTTTGTCAG CKO_02742 2544541 - 2545455 + | hypothetical protein CKO_02743 2546031 - 2545516 - | phosphatidylglycerophosphatase A CKO_02744 2546986 - 2546009 - | thiamine monophosphate kinase TERM 3312 2546067 - 2546049 - G 70 -6.7 -4.18018 | opp_overlap 2546039 CCTTTCCAGTCAAAA GTGACAG GCTTT CCGTCAC GCATGAAGCTGATGC TERM 3313 2547055 - 2547016 - R 100 -10.7 -5.61277 | gap 1, opp_overlap 2547044 CAGAAAAAAAGAAAA GGCCGG-AGATAGCGGGA ATACA TCCCGCCACCAGCCGACC TGGAGATTACTTTTT CKO_02745 2547481 - 2547062 - | transcription antitermination protein NusB CKO_02746 2547971 - 2547501 - | riboflavin synthase subunit beta TERM 3314 2547547 - 2547563 + g 74 -7.9 -4.17132 | overlap 2547548 ATTTCAAGCGCGGTC AGTGCGG CTT CCGCACC TTTGTTGCCAGCTTT TERM 3315 2547548 - 2547562 + g 72 -11.4 -3.09556 | overlap 2547547 TTTCAAGCGCGGTCA GTGCGG CTT CCGCAC CTTTGTTGCCAGCTT CKO_02747 2549160 - 2548057 - | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase CKO_02748 2549472 - 2549164 - | hypothetical protein CKO_02749 2549748 - 2550305 + | hypothetical protein CKO_02750 2550606 - 2551460 + | hypothetical protein TERM 3316 2551534 - 2551505 - T 87 -10.7 -4.03234 | gap 1, opp_overlap 2551507, overlap 2551507 CGCCGGGCACAGAAA GAGCACCGAACGCG CAA CGCG-CCGGTGCTT TTTTATTTCTTCTGA TERM 3317 2551532 - 2551507 - T 90 -13.3 -3.61232 | gap 1, opp_overlap 2551507, overlap 2551505 CCGGGCACAGAAAGA GCACCGAACGCG CAA CGCG-CCGGTGC TTTTTTATTTCTTCT TERM 3318 2551507 - 2551532 + T 100 -11.1 -5.82036 | gap 1, opp_overlap 2551505 2551507 CCGGGCACAGAAAGA GCACCGAACGCG CAA CGCGC-CGGTGC TTTTTTATTTCTTCT CKO_02751 2551884 - 2551537 - | hypothetical protein TERM 3319 2552024 - 2552005 - R 100 -11.4 -5.64274 | overlap 2551981 TTAGCGATAAAAAAA TCCCGGCC ATGC GACCGGGA TTCCAGTAATAACGT CKO_02752 2553066 - 2552050 - | preprotein translocase subunit SecF CKO_02753 2554846 - 2553032 - | preprotein translocase subunit SecD TERM 3320 2554740 - 2554770 + gr 90 -13.4 -3.53091 | gap 1 TGGATCAGCGTTTGC TCACTGGCG-GCG ACGCCG CGCGCGCCAGTGA TTTGAACAGCCGGAT CKO_02754 2555239 - 2554907 - | preprotein translocase subunit YajC CKO_02755 2556389 - 2555262 - | queuine tRNA-ribosyltransferase CKO_02756 2557513 - 2556443 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase CKO_02757 2557696 - 2558331 + | acyl carrier protein phosphodiesterase CKO_02758 2558481 - 2559083 + | hypothetical protein TERM 3321 2559103 - 2559118 + T 100 -10.4 -5.4756 | opp_overlap 2559103 CTCGAATTGAAAAAA GCTCGC TATG GCGAGC TTTTTTATTGCGCTT TERM 3322 2559118 - 2559103 - T 100 -10.4 -5.15969 | opp_overlap 2559103 CTCGAATTGAAAAAA GCTCGC TATG GCGAGC TTTTTTATTGCGCTT CKO_02759 2560629 - 2559235 - | hypothetical protein CKO_02760 2563256 - 2560626 - | hypothetical protein TERM 3323 2560732 - 2560705 - G 93 -10.4 -4.38712 | overlap 2560706 2560707 2560709 GCCACGCCGATAAAA GCGATGGCGCGC GCCA GCCCGCCGCCGC GCGCGCTATCCACCA TERM 3324 2560742 - 2560707 - G 78 -13.3 -2.53422 | gap 1, overlap 2560705 2560706 2560709 CACGCCGATAAAAGC GATGGCGCGCGCCAGC CCGCC GCC-GCGCGCGCTATC CACCAGCATCAGCTT TERM 3325 2562866 - 2562843 - G 72 -2.2 -4.84529 | overlap 2562845 2562846 2562848 GGATAAACCGAAAAA GAGGAGCAGG ATGC CCAGCTTCGC CAGCGGATTCCCCTG CKO_02762 2563417 - 2563241 - | hypothetical protein CKO_02761 2563416 - 2563595 + | hypothetical protein CKO_02763 2563471 - 2564463 + | hypothetical protein TERM 3326 2564479 - 2564529 + T 70 -9 -3.40775 | gap 1, opp_overlap 2564487, overlap 2564487 TTCACCCAGACCGTA GCGGAAATGGCGGGCAGGCTGAG AACGCC CTCAGCCAGTTGGCC-TTTCCCC TCTTTGCCTCGCCAT CKO_02764 2566313 - 2564457 - | maltodextrin glucosidase TERM 3327 2564487 - 2564522 + g 70 -8.9 -3.695 | opp_overlap 2564487, overlap 2564479 GACCGTAGCGGAAAT GGCGGGCAGGCTGAG AACGCC CTCAGCCAGTTGGCC TTTCCCCTCTTTGCC CKO_02766 2566468 - 2566340 - | hypothetical protein CKO_02765 2566343 - 2566447 + | hypothetical protein CKO_02767 2567853 - 2566465 - | putative proline-specific permease TERM 3328 2567713 - 2567723 + g 74 -6.8 -4.27617 | opp_overlap 2567698 GGCCAGCAACACGCT TGGC CCG GCCA TTTTGATGGCGTCTG TERM 3329 2567892 - 2567870 - RH 100 -17 -6.04419 | opp_overlap 2567873 AAAATAATAAAAAAA CCACGGGGCC TGT AGCCCCGTGG TTAAAACATACTGTC TERM 3330 2567873 - 2567889 + rH 71 -10.8 -2.7185 | opp_overlap 2567870 ATAATAAAAAAACCA CGGGGC CTGTA GCCCCG TGGTTAAAACATACT CKO_02769 2569234 - 2567915 - | hypothetical protein TERM 3331 2568411 - 2568376 - GH 87 -9.6 -4.27617 | overlap 2568365 GACAGGCGATGAAAA TCAGCGCCGCCAGCAG CAGG CTACCCGCGCCGCCGA AGGTATGCTGAACGT CKO_02770 2569404 - 2569231 - | hypothetical protein CKO_02768 2569226 - 2569363 + | hypothetical protein TERM 3332 2569616 - 2569595 - TR 100 -13.1 -4.88918 | opp_overlap 2569598 TTACTGCAAAGAAAA TAAGCCAGC ATCC GCTGGCTTA TGGAAAGCTAACCTT TERM 3333 2569598 - 2569613 + Tr 74 -10.4 -3.29511 | opp_overlap 2569595 CTGCAAAGAAAATAA GCCAGC ATCC GCTGGC TTATGGAAAGCTAAC CKO_02771 2570938 - 2569643 - | phosphate regulon sensor protein TERM 3334 2571003 - 2570966 - R 80 -9.7 -3.97088 | opp_overlap 2570966 CTTCAGAATAGTAAA CCCGCCCGCCACACCGA GATG CCGGTCTGGCGGCAAGG TATTAAAAACGGGTC CKO_02772 2571695 - 2571006 - | transcriptional regulator PhoB TERM 3335 2571609 - 2571621 + g 77 -7.7 -4.25104 | ATCTTCGGCTTCTAC TGGCT GAA AGCCA TTTTGCTCGAGCACG TERM 3336 2572014 - 2572027 + G 70 -3.1 -4.7254 | GGTGGATGCGATTAT TGTCG CGGG TGACA TTTTTGATACAGGAT TERM 3337 2572103 - 2572074 - g 71 -10.8 -3.31144 | opp_overlap 2572073, overlap 2572093 CCGCGAGTTGTATAA CCGGTTTGTTGT CAATTT ACAGCAAACCGG CTGTCATCTGGTGGT TERM 3338 2572344 - 2572330 - g 77 -4.2 -4.88407 | overlap 2572332 TCAGGCAATGAAAAA CAGCAG CAT CTGCTC GGGGCGATCACGGAT CKO_02773 2571742 - 2573091 + | exonuclease subunit SbcD TERM 3339 2573810 - 2573787 - g 90 -5.2 -5.14163 | overlap 2573789 ACTGACGAAGAAAAA CAGCTGCTCG CCCG CCAGCAGCTT CACCAGCAACATCTG TERM 3340 2573808 - 2573789 - g 74 -7.8 -4.19587 | overlap 2573787 TGACGAAGAAAAACA GCTGCTCG CCCG CCAGCAGC TTCACCAGCAACATC TERM 3341 2573935 - 2573912 - g 79 -7.3 -4.49937 | overlap 2573913 GGAAGAACAGGAAAA CGCGCAGCC GCAGCT GGCCGCGCT GAACCTGGCGCATCC TERM 3342 2573934 - 2573913 - g 71 -10.8 -3.28878 | overlap 2573912 GAAGAACAGGAAAAC GCGCAGCC GCAGCT GGCCGCGC TGAACCTGGCGCATC TERM 3343 2574361 - 2574343 - g 72 -12.4 -2.78384 | overlap 2574318 2574315 CGCTGGCGCAGCATA CGCAGCAG CAG CCGCTGCG TCAGCGGCTCGCCAG TERM 3344 2575163 - 2575153 - g 71 -8.2 -3.91897 | opp_overlap 2575153, overlap 2575154 TGGGTGAGCTACAAA CGCG CAT CGCG CAGTTGACTCCCCTG CKO_02774 2573088 - 2576231 + | exonuclease subunit SbcC CKO_02776 2576395 - 2576273 - | hypothetical protein CKO_02775 2576228 - 2576374 + | hypothetical protein CKO_02777 2577418 - 2576510 - | hypothetical protein TERM 3345 2577994 - 2577982 - g 76 -3.3 -5.055 | overlap 2577990 GCAAGCGCTAAAAAA GCGGA AGA TACGC TGGCGCTGCTGCGTA CKO_02778 2577478 - 2578455 + | recombination associated protein CKO_02779 2578548 - 2578408 - | hypothetical protein TERM 3346 2578486 - 2578463 - GT 100 -15.4 -3.15621 | opp_overlap 2578457, overlap 2578461 AACGCTAAGTGAATA TTCCCTCTCC GCCG GGAGAGGGAA GCGCCATTATAAATA CKO_02780 2578795 - 2578493 - | hypothetical protein CKO_02781 2579525 - 2578848 - | hypothetical protein TERM 3347 2579065 - 2579055 - G 72 -2.4 -4.87133 | opp_overlap 2579055 ATTCGCCAAAGAAAA GACC GGA GGAC GTTGTAAGACCTGCC CKO_02782 2579978 - 2579787 - | hypothetical protein CKO_02783 2580493 - 2580005 - | hypothetical protein CKO_02784 2581190 - 2580732 - | hypothetical protein CKO_02785 2581329 - 2582138 + | pyrroline-5-carboxylate reductase CKO_02786 2583251 - 2582154 - | diguanylate cyclase AdrA TERM 3348 2583200 - 2583224 + g 81 -4.1 -5.25803 | opp_overlap 2583198, overlap 2583198 2583202 CATTTTGAGGAGAGT GAGGTGGCTCA CTC TGTGCGACCGC TTTTTTGTAAAAGTT CKO_02787 2583679 - 2583359 - | hypothetical protein TERM 3349 2583818 - 2583783 - R 83 -9.1 -4.30576 | gap 1, opp_overlap 2583778 2583783 2583786, overlap 2583785 2583788 TGCTGACGACGAAAA TACCACCTGACGGCAA AAGTA TTGCCGTCAGG-AGTC CGTTTACTTCAGTCC TERM 3350 2583817 - 2583785 - R 93 -12 -3.7574 | opp_overlap 2583783 2583778 2583786, overlap 2583783 2583788 CTGACGACGAAAATA CCACCTGACGGCAA AAGTA TTGCCGTCAGGAGT CCGTTTACTTCAGTC TERM 3351 2583786 - 2583816 + r 90 -15.5 -2.71246 | opp_overlap 2583785 2583783 2583788, overlap 2583783 2583778 TGACGACGAAAATAC CACCTGACGGCAA AAGTA TTGCCGTCAGGAG TCCGTTTACTTCAGT TERM 3352 2583814 - 2583788 - R 100 -16.7 -2.96723 | opp_overlap 2583786 2583783 2583778, overlap 2583785 2583783 ACGACGAAAATACCA CCTGACGGCAA AAGTA TTGCCGTCAGG AGTCCGTTTACTTCA CKO_02788 2585237 - 2583822 - | bacterial alkaline phosphatase TERM 3353 2584776 - 2584790 + g 70 -2.8 -4.76041 | TTTGGCCATCTCCAG GATCGT GGT GTGATC TTTTTCGTGGATATC TERM 3354 2585400 - 2585421 + rH 77 -3.7 -5.1101 | gap 1, overlap 2585402 CTCTGAATACGATCA GCTAC-GAGG ATG CCTCAGTAAC TTTTTTACATACTGG CKO_02790 2585657 - 2585397 - | hypothetical protein CKO_02789 2585656 - 2585808 + | hypothetical protein CKO_02791 2586949 - 2585888 - | hypothetical protein TERM 3355 2585997 - 2586021 + g 77 -3.5 -5.0133 | opp_overlap 2586013 ACGCTTCCCATATCG TAGCGGGGG GTAATCA CGCTCGCTA TTTTTTGCAAACGTG TERM 3356 2586469 - 2586493 + g 74 -7.2 -4.19746 | opp_overlap 2586473 TACCGCTGGCGCGCA CATACTGCAC CATAC GTTCAGTATG TTGTTTTCCGGTCAG CKO_02792 2588208 - 2586964 - | hypothetical protein TERM 3357 2587237 - 2587222 - G 78 -2.4 -5.1848 | overlap 2587223 AATTAAGGCAAAAAA CGGGCC GTAA GGCGCA TACATGCAGGCTGCG CKO_02793 2589041 - 2588277 - | gluconate 5-dehydrogenase TERM 3358 2589105 - 2589048 - R 89 -8.9 -4.7254 | gap 2, opp_overlap 2589048 ACTTTTCATCAAAAA CCTCTTTTTCGATAGCTGTTACGCGTA ACTGTA TACGCGTAACAG-TAG-AAAAAAGAAG TTCTCTTACACAACT CKO_02794 2589198 - 2589025 - | hypothetical protein TERM 3359 2589197 - 2589164 - G 95 -11.9 -4.49556 | overlap 2589165 TTGGCAGCAAAGAAA GGATCATGTACAGAA TGCT TTCTGCACATGATCA CGATTAACAGCGGAT TERM 3360 2589196 - 2589165 - G 95 -15.4 -3.29252 | overlap 2589164 TGGCAGCAAAGAAAG GATCATGTACAGAA TGCT TTCTGCACATGATC ACGATTAACAGCGGA CKO_02795 2590407 - 2589214 - | hypothetical protein TERM 3361 2589715 - 2589697 - G 73 -8.8 -3.89822 | CATGGATTTGATAAA CAGCGCCA GGA TGGGGCTG ATCGAACCGTTACAG TERM 3362 2589923 - 2589910 - G 85 -2.3 -5.4505 | overlap 2589891 2589889 GGCGGTAATAAAAAA GACCG CCCG CAGCC CGATATGATCGGCAA CKO_02796 2591260 - 2590577 - | hypothetical protein TERM 3363 2591465 - 2591444 - g 82 -5.3 -5.055 | gap 1, opp_overlap 2591459, overlap 2591446 GCAATCGGCAAAAAA TATTGTCGAT GCC ATCGACAA-A GCCCGCTTTGACGTT TERM 3364 2591464 - 2591446 - g 86 -10.4 -4.15235 | opp_overlap 2591459, overlap 2591444 AATCGGCAAAAAATA TTGTCGAT GCC ATCGACAA AGCCCGCTTTGACGT TERM 3365 2591857 - 2591875 + G 80 -8.8 -4.08767 | TTACGCTGACTCGCG CGAATCGC GAT GCGATCCG TTTTGCGGAAGTGGC CKO_02797 2591349 - 2592464 + | D-alanyl-alanine synthetase A TERM 3366 2592472 - 2592502 + T 100 -14.7 -3.80625 | overlap 2592465 2592463 TGTTATGATGACGAT GCGCCATCTGGTG TTGAT CGCCTGATGGCGC TTTGGCTTATCAGGC CKO_02798 2592815 - 2592570 - | hypothetical protein CKO_02799 2593023 - 2593358 + | hypothetical protein CKO_02800 2594489 - 2593395 - | hypothetical protein CKO_02801 2595728 - 2594508 - | transport protein CKO_02802 2595870 - 2595721 - | hypothetical protein TERM 3367 2596145 - 2596163 + H 71 -10.2 -2.75039 | TAGTCTGCTTTTTTC TGCCGTGC TGT GCGCGGCG TCATTGACATCTGTC TERM 3368 2597116 - 2597104 - g 80 -4.7 -5.1101 | opp_overlap 2597104 2597104 2597115 GGATTATTCAAAAAA CCGGC GGC GGCGG TGGTTTCATCACCTA CKO_02803 2596149 - 2597279 + | beta-lactamase/D-alanine carboxypeptidase TERM 3369 2597293 - 2597321 + T 85 -5.4 -5.38497 | gap 1 GATCAATACTCTGAA GGCAAA-TGGTTG ATAT TGACCAGTTTGCC TTTTTTCATTTCGAT CKO_02804 2597903 - 2597280 - | putative DNA-binding transcriptional regulator TERM 3370 2597946 - 2597923 - R 83 -13.2 -3.14564 | opp_overlap 2597923 GCATCCTTGCATTAA TGCCCGCCAT ATCC ATGACGGGCA TTTCCTTTGATTAAA TERM 3371 2597923 - 2597946 + r 89 -11 -4.14598 | opp_overlap 2597923 GCATCCTTGCATTAA TGCCCGCCAT ATCC ATGACGGGCA TTTCCTTTGATTAAA CKO_02805 2600911 - 2597990 - | hypothetical protein TERM 3372 2600228 - 2600240 + g 70 -9.1 -3.63569 | overlap 2600224 CACCGTAGAGTCAGT CACCG TGA CGGTG TTGTTGAACACTTCA TERM 3373 2600323 - 2600345 + g 81 -7 -4.72272 | opp_overlap 2600328 AACCCTGAGTCAGCG TAATACCCGC AAC GTGGGAATTA TTTTTGATGACCAGG TERM 3374 2600880 - 2600894 + g 73 -5 -4.57569 | GCCAGTGCTAATTGT GAGACT ACA AGTTTC TTTTTCCAGGAGTGC CKO_02806 2601267 - 2601130 - | hypothetical protein TERM 3375 2601570 - 2601541 - g 80 -9.9 -3.99324 | opp_overlap 2601540 CTCGACGACTACAAA GCGATCGACGCCA TGCC TGGCGTCATGCGC ATTCCTGAAAAACAC TERM 3376 2601872 - 2601856 - g 73 -9.3 -3.91488 | opp_overlap 2601857 2601863 2601864 AACCTCGGTAAACAA GCGGTGG TCG CCGCCGC TGCGGGCGCTGATTT CKO_02807 2601406 - 2602380 + | delta-aminolevulinic acid dehydratase CKO_02808 2602549 - 2604264 + | hypothetical protein TERM 3377 2604272 - 2604318 + T 85 -12.3 -3.30243 | gap 2, opp_overlap 2604265, overlap 2604273 2604298 2604298 2604301 CAGAATAAGGCGTTT ACGC--CGCCATCCGGCGCGGTG CCA CATCGTGCCTGATGGCGCTGCGC TTATCAGGCCTGCAT TERM 3378 2604273 - 2604317 + T 90 -15.8 -2.57931 | gap 2, opp_overlap 2604265, overlap 2604272 2604298 2604298 2604301 AGAATAAGGCGTTTA CGC--CGCCATCCGGCGCGGTG CCA CATCGTGCCTGATGGCGCTGCG CTTATCAGGCCTGCA CKO_02809 2605224 - 2604373 - | taurine dioxygenase TERM 3379 2605049 - 2605037 - G 80 -9.1 -4.13014 | opp_overlap 2605030 2605045 TGCAGATCGCCAAAA CGCTG TGC CAGCG CGCGCTGTTGCTGCG TERM 3380 2605102 - 2605092 - G 85 -6.8 -4.87665 | overlap 2605093 GTTCACGCAGAAAAA CCAC CTG GTGG CGCAGCACCGCGTGA CKO_02810 2606048 - 2605221 - | taurine transporter subunit CKO_02811 2606812 - 2606045 - | taurine transporter ATP-binding subunit CKO_02812 2607785 - 2606823 - | taurine transporter substrate binding subunit TERM 3381 2607094 - 2607106 + g 70 -6.9 -4.10429 | ATATAGGGTTGCTGC GCGTC GAT GGCGC TTTTCGCGAATGCTT TERM 3382 2607178 - 2607200 + g 79 -11.3 -3.6806 | ACCCACACATCCAGC GTCGGCGAG CCCCA TTCGCCGAC TTTCCCTGAGTCTGT TERM 3383 2607604 - 2607584 - G 75 -12.5 -2.54193 | opp_overlap 2607574, overlap 2607574 CATCACCGGAAGCCA GCGCGCGCA CGA TGCTCGCGC CGCTGTCGAATTTAC TERM 3384 2607756 - 2607744 - G 74 -6.9 -4.2528 | CTGGAATGCAATAAA CGCCA GTG CGGCG AGAAGTGTGTTACGC CKO_02816 2608158 - 2608000 - | hypothetical protein CKO_02813 2607898 - 2608056 + | hypothetical protein CKO_02814 2607972 - 2608070 + | hypothetical protein CKO_02815 2608129 - 2608758 + | hypothetical protein TERM 3385 2609191 - 2609167 - g 70 -2.7 -4.82901 | CGCCCTTTATAAAAA GCCCGGCGA TGCTGAC TGGCCTGGC GTCGTTTACCGGCGG TERM 3386 2609931 - 2609975 + G 76 -10.2 -3.71645 | opp_overlap 2609943 GAGGCGCTGCATCAT CTGGTCAACGAATTC-GCGTTC CCC GAACGTGGGATTCGCTG-CCAG TTTGAGTATCGCCTT CKO_02817 2608758 - 2610299 + | hypothetical protein CKO_02818 2610454 - 2611689 + | hypothetical protein TERM 3387 2611921 - 2611910 - g 81 -3.6 -5.18726 | TGCCGAGAAGAAAAA CCCG CAGG CGGA CGTCTGGTACGGCGG CKO_02819 2611686 - 2612717 + | hypothetical protein TERM 3388 2613312 - 2613322 + G 71 -8.2 -3.88291 | opp_overlap 2613295 2613298, overlap 2613299 ACGCCGGGGAGTTCG CGCC GCT GGCG TTTATGACGGTGCTG CKO_02820 2612786 - 2614864 + | hypothetical protein CKO_02821 2614864 - 2615922 + | ferric transporter ATP-binding subunit CKO_02822 2616942 - 2616010 - | homocysteine methyltransferase TERM 3389 2616323 - 2616301 - G 91 -14.8 -3.14564 | overlap 2616280 GCAGGCGTTGAGGAA CGCCGCCACG TCA CGCAGCGGCG TACCGTCGCTCAGAT TERM 3390 2617223 - 2617203 - g 71 -9.7 -3.58726 | overlap 2617214 GGCGCTCAGACAGAA GTGGGAACA TAC CGTCCCCAC TCATACGACGGAATG CKO_02823 2617137 - 2617358 + | hypothetical protein TERM 3391 2618123 - 2618109 - g 71 -11.4 -2.86164 | opp_overlap 2618096 TGGCTAACGATCAGA TGGCGC TGG GCGCCA TGCGGGCGATCGCTG CKO_02824 2617358 - 2618446 + | lac repressor TERM 3392 2618651 - 2618665 + G 85 -7.1 -4.87665 | opp_overlap 2618645 GCAACTTAATCGCCT GGAGG CGCAC CCTCC TTTTTGTAGCTGGCG TERM 3393 2619126 - 2619116 - g 77 -8.2 -4.14392 | GCTTAAGGGTGAAAA CCGC CTC GCGG TAATGGTGCTGCGCT TERM 3394 2619400 - 2619382 - g 79 -3.1 -5.24129 | gap 1, opp_overlap 2619386, overlap 2619383 TCGTCGGAGAAAAAA CCGCT-CC GCTC GGCAGCGA GATCATTGATGAGCG TERM 3395 2619671 - 2619645 - g 71 -10.2 -3.16742 | GCCAACCGCCATGAA CATCACCCGG AAAACGG CCAGGTGATG GACAAAGAGACCATG TERM 3396 2620250 - 2620264 + G 73 -5.6 -4.53303 | overlap 2620251 GTTTCGCCAGTATCC GCGCCT GCA AGGCGG TTTTGTCTGGGACTG TERM 3397 2620811 - 2620755 - g 87 -8 -4.58685 | opp_overlap 2620808, overlap 2620757 2620766 AAACTCGGCGAAAAA CTCGCTACACAGTG-GCCGCAGCACGCT GGC AACGCGCCACAGCTCACCA-GCAGCGGG ACGGCATTCCGTATT CKO_02825 2618568 - 2621645 + | beta-D-galactosidase CKO_02826 2621752 - 2621624 - | hypothetical protein CKO_02827 2623628 - 2621742 - | propionyl-CoA synthetase TERM 3398 2623081 - 2623055 - G 71 -5.7 -4.3129 | gap 1, opp_overlap 2623059 2623077, overlap 2623057 GATCCACCAGCAAAA CG-TGGCGCGGC TGAT GCTGCGCCTGCG CGATGGCATCATCCA TERM 3399 2623059 - 2623101 + g 74 -4.2 -4.82901 | gap 3, opp_overlap 2623057 2623055, overlap 2623077 CACCAGCAAAACGTG GC-GC-GGCTGATGCTG-CGC CTGC GCGATGGCATCATCCAGCAGC TTTTTATACGGCAGA CKO_02828 2625122 - 2623662 - | 2-methylcitrate dehydratase TERM 3400 2625178 - 2625153 - R 76 -4.1 -5.05113 | gap 1, opp_overlap 2625157 GTTAGAGAAATAAAA TTATTGGCGCTG ATC CAGCGG-AATAA ATTCGCGATCGTCCG CKO_02829 2626418 - 2625153 - | methylcitrate synthase TERM 3401 2626407 - 2626442 + g 71 -8.2 -3.86897 | gap 1, opp_overlap 2626405 2626406, overlap 2626413 GTAGGCCTGATAAGG CGCAGCCGCCATCAGGC ATT GCCGGATGGCA-CTTCG TTTATCCGGCCTACA CKO_02830 2627489 - 2626461 - | 2-methylisocitrate lyase TERM 3402 2627084 - 2627073 - G 71 -7.2 -3.95584 | overlap 2627074 GGCGGAGGAACCAAA GCCG ATGT CGGC ATCCACCAGCAGCGG TERM 3403 2628117 - 2628133 + G 82 -5 -5.12474 | opp_overlap 2628118, overlap 2628118 CGATCTGGCGGAAGA AGCCGG GATGA CCGGCA TTTTTATCTATTCTG TERM 3404 2628284 - 2628266 - g 75 -11.7 -2.8805 | ACGATCTGGGAGATA TGCGCGG CCATT CCGCGCA AATGGAGCAGGTTCG TERM 3405 2628373 - 2628399 + G 74 -2.1 -5.03314 | opp_overlap 2628373, overlap 2628380 GGCACCGGTAAAGAG CTGGCGGCGCA GGCGA TTCACCGCGAG TTTTTTGCCCGTCGG TERM 3406 2628981 - 2628991 + G 100 -8.2 -5.42259 | GCGGAATATGATGGA GCGC CTG GCGC TTTTTTTAAGCGTCG TERM 3407 2629021 - 2629032 + G 75 -5.8 -4.58685 | GAGCCGCAGCCCAGT CTGG ATAG CCAG TTTTTACAGCAATTT CKO_02831 2627605 - 2629191 + | hypothetical protein TERM 3408 2629267 - 2629321 + T 82 -11.5 -3.65351 | opp_overlap 2629318, overlap 2629258 GCCGGATGGCGCTGC CG-CTTATCCGGCCTACGAGCTACGAG CAG CACTGAAC-CGTAGGCCGGATAAGACG TTTACGTCGCCATCC CKO_02832 2629626 - 2629351 - | hypothetical protein TERM 3409 2629666 - 2629690 + H 73 -11.5 -2.75712 | overlap 2629657 2629664 2629673 CGCTATCATCGCCTT CTCGGAACGGA TGC TCTGTTCTGAG TGATTAAATAACTAG CKO_02833 2629825 - 2630457 + | hypothetical protein CKO_02834 2631592 - 2630423 - | hypothetical protein TERM 3410 2630693 - 2630678 - G 76 -3.2 -5.0538 | gap 1, overlap 2630680 GGCGACGGTAAAAAA GAGCGCC ACC AGCGC-C AGAACCGGCTGCTGT TERM 3411 2630692 - 2630680 - G 70 -6.9 -4.15748 | overlap 2630678 CGACGGTAAAAAAGA GCGCC ACC AGCGC CAGAACCGGCTGCTG TERM 3412 2631039 - 2631011 - G 70 -6.6 -4.17048 | gap 1, opp_overlap 2631014, overlap 2631012 CCCGGTCGAAAATAA CGATG-CGCCGCG CGTT CGCTGCGGCAGCG TCTCACTGATAAACA TERM 3413 2631171 - 2631157 - G 71 -7.8 -3.9398 | overlap 2631148 2631149 CCAGAACCGGAGAAA GCACCG GGG CGATGC CGTTCACCGTCATGA CKO_02835 2632975 - 2631611 - | hypothetical protein TERM 3414 2632095 - 2632116 + g 90 -10.2 -4.2361 | opp_overlap 2632083 AAGTTCGCTCGCGCC GCGCCAAT ATCGGC ATTGGCGC TTTTCAGGTTATGTT TERM 3415 2632609 - 2632593 - G 71 -10.9 -3.24232 | overlap 2632591 2632589 2632604 TTGCGGCCAAACAGA TCCAGCT CAA AGCTGGA CACCGCGCCATCGGC CKO_02836 2636086 - 2632979 - | hypothetical protein TERM 3416 2633221 - 2633193 - G 95 -14.6 -3.5393 | gap 1 ATGATTGGGCGCAAA CGGGTCTGCGCCG CTCG CAGCGCAG-CCCG GCTCAGGGAATAACC TERM 3417 2633587 - 2633609 + g 70 -5.4 -4.431 | TTTTGTCCATCGCGG CGCCGGAGCT GAA ACCGCTGGCG TTTTCTCCCTGAATC CKO_02837 2637207 - 2636086 - | hypothetical protein TERM 3418 2637328 - 2637346 + r 87 -10.4 -4.09292 | opp_overlap 2637328 TCACAACGACAATAA GGGAAATA ATT TATTTCCC TTTGATTATTAAATT TERM 3419 2637346 - 2637328 - R 84 -10.4 -3.91357 | opp_overlap 2637328 TCACAACGACAATAA GGGAAATA ATT TATTTCCC TTTGATTATTAAATT CKO_02838 2637934 - 2637368 - | hypothetical protein CKO_02840 2638148 - 2638029 - | hypothetical protein TERM 3420 2638104 - 2638092 - Gg 89 -2.7 -5.64006 | ATTTAATGAAAAAAA TCTGA AAA TCAAA TGGAGAGAATATTTA CKO_02839 2637958 - 2638140 + | hypothetical protein CKO_02841 2639016 - 2638123 - | hypothetical protein CKO_02842 2639966 - 2639019 - | hypothetical protein CKO_02843 2641034 - 2639982 - | hypothetical protein TERM 3421 2640192 - 2640175 - G 71 -4.7 -4.65895 | overlap 2640146 2640176 CCGCGCAGGCAAAAA CGCGCCA TATG CGGCGCC ATCAGGCCGACAAAC CKO_02844 2642044 - 2641031 - | hypothetical protein TERM 3422 2641083 - 2641064 - G 74 -4.2 -4.78077 | gap 1, overlap 2641066 CGCAATGAAAATAAA CACCGG-CG CGC CGACCAGCG CGGTCATCACTCCTG TERM 3423 2641288 - 2641251 - G 70 -5.3 -4.39828 | overlap 2641255 2641271 AACAGCCCGATAAAA CCCAGCGGCCCGGCAAC GGAT ACCGCCGCGCCGCACAG CAGCGCAATGGCGAT TERM 3424 2641567 - 2641522 - G 71 -8.1 -3.8211 | overlap 2641549 GCTCATCCAGAATAA GGATTGCCGCCGTGAGCGACG ACAC CATCGCCGACAGCGCCACGCC GCAGAGCGTGACCTT CKO_02846 2642868 - 2642041 - | hypothetical protein TERM 3425 2642282 - 2642251 - GH 73 -10.2 -3.11812 | gap 1, overlap 2642253 ATTGAGATCATGTAA CACCACCACCACGGT ACG ACCATGATGGCGG-G TCAGGGAGTGCAGAA TERM 3426 2642281 - 2642253 - GH 85 -13.9 -3.11768 | overlap 2642251 TGAGATCATGTAACA CCACCACCACGGT ACG ACCATGATGGCGG GTCAGGGAGTGCAGA CKO_02845 2642862 - 2643077 + | hypothetical protein CKO_02847 2643236 - 2643108 - | hypothetical protein TERM 3427 2643274 - 2643297 + H 73 -7.4 -4.09864 | CTGGATAAACCTGTT TACCCTCCCG TTTT TGGCAGGGTA TTTTGCGGAATAAAT TERM 3428 2643676 - 2643686 + G 70 -6.8 -4.1711 | ACACGCTGGGCGGAA CGCA GGA TGCG TTTGTTCGCCGTGGT CKO_02848 2643348 - 2645480 + | hypothetical protein TERM 3429 2645519 - 2645496 - f 75 -9.6 -3.64703 | opp_overlap 2645498 2645512 TCCTTCTCATCCAAA TACCCTGTCA ATTC TGGCAGGGTA TTCCCGCTATTCCCT TERM 3430 2645498 - 2645517 + F 70 -10 -3.06315 | opp_overlap 2645496, overlap 2645512 CTTCTCATCCAAATA CCCTGTCA ATTC TGGCAGGG TATTCCCGCTATTCC TERM 3431 2645635 - 2645649 + F 72 -5.8 -4.43012 | TAACATTTTGTGATT TTTATC GCG GATAAA TTTTAATCTTCCGCT TERM 3432 2645909 - 2645884 - f 74 -3.3 -4.94992 | gap 1, opp_overlap 2645889, overlap 2645887 2645888 2645889 TTAAAGGCACAAAAA TAACGT-TCGCG TAG CGCGACATGCTA TTGGAGAAATAATAT CKO_02849 2645923 - 2647311 + | tryptophanase TERM 3433 2647315 - 2647350 + F 70 -8.8 -3.46088 | opp_overlap 2647313, overlap 2647314 2647316 CCGGTGAAATAACGT TCTGATACGCGCTCCC CTGC GGGAGCGCGATTCCGC TATTTAATACGATAT TERM 3434 2647316 - 2647349 + F 78 -12.3 -2.67171 | opp_overlap 2647313, overlap 2647315 2647314 CGGTGAAATAACGTT CTGATACGCGCTCCC CTGC GGGAGCGCGATTCCG CTATTTAATACGATA TERM 3435 2647497 - 2647475 - g 73 -6.1 -4.41348 | overlap 2647476 TCGGTCGCAAATAAA GCGCCGTCG CTGAT CGGCGGGGC AATGATTATCGGTGG CKO_02850 2647415 - 2648692 + | tryptophan permease TERM 3436 2648746 - 2648717 - T 100 -14.5 -4.36914 | opp_overlap 2648723, overlap 2648723 CGCGGCGGCATAAAA TAAAAAGGGAACC GCCG GGTTCCCTTTTCA ACACTGGTGACGCGC TERM 3437 2648723 - 2648740 + T 89 -11.3 -4.10161 | opp_overlap 2648723 2648717 GGCATAAAATAAAAA GGGAACC GCCG GGTTCCC TTTTCAACACTGGTG TERM 3438 2648740 - 2648723 - T 100 -11.3 -5.54907 | opp_overlap 2648723, overlap 2648717 GGCATAAAATAAAAA GGGAACC GCCG GGTTCCC TTTTCAACACTGGTG CKO_02851 2649423 - 2648773 - | hypothetical protein TERM 3439 2649035 - 2649078 + g 73 -5.2 -4.64423 | gap 1, overlap 2649029 2649037 TTTTGCAGGGCCTGC GCCATCAGCGTAC-GCATTTG CGC CAGCTGCTGTTCGCTGAAGTC TTTCTCTTTTTCTTC CKO_02852 2650450 - 2649416 - | hypothetical protein CKO_02853 2651213 - 2650494 - | hypothetical protein TERM 3440 2650905 - 2650921 + g 78 -5.7 -4.81359 | TCGGGACGCCAGTTT CGGGCTG ATG CGCCCCG TTTTGTCTTTCCCTT TERM 3441 2651277 - 2651242 - R 100 -5.4 -6.0427 | gap 1, overlap 2651243 ATGAGAGAAAAAAAA GGTACCTG-GCGGCACA GAA CATGCCGGGCAGGTACA AAACGGACAGAACGG TERM 3442 2651276 - 2651243 - R 83 -8.9 -4.20122 | gap 1, overlap 2651242 TGAGAGAAAAAAAAG GTACCTG-GCGGCACA GAA CATGCCGGGCAGGTAC AAAACGGACAGAACG CKO_02854 2652270 - 2651323 - | hypothetical protein TERM 3443 2651723 - 2651739 + g 74 -4.3 -4.77036 | AGGATTGCGCTACTG CGCTGGA ACA TCTCGCG TTTTTGATCGTCCGA TERM 3444 2652196 - 2652215 + g 74 -7.9 -4.07568 | overlap 2652184 CACTTTCCAGGCGCC GCCATGA AATTCA TCATGGC TTTTACGCGAGGAGC CKO_02855 2653133 - 2652270 - | flagellar motor protein MotA CKO_02856 2653836 - 2653141 - | flagellar biosynthesis sigma factor CKO_02858 2654326 - 2653856 - | hypothetical protein CKO_02857 2654136 - 2654354 + | hypothetical protein CKO_02859 2655413 - 2654340 - | hypothetical protein TERM 3445 2654919 - 2654944 + g 71 -10.4 -3.17392 | CAACCCTGCGGTTGG CGTCTGCGGC GACTCG GTCGCAGGCG TTACGTTAACCCCTG CKO_02861 2655718 - 2655413 - | hypothetical protein CKO_02860 2655539 - 2655679 + | hypothetical protein CKO_02862 2656107 - 2655715 - | hypothetical protein CKO_02863 2657458 - 2656130 - | hypothetical protein TERM 3446 2657099 - 2657117 + g 81 -6.6 -4.7373 | overlap 2657101 GCCGTTGAGATTGAT CTTCAGCG TAC CGCTGGCG TTTTTAATCGCCTCA TERM 3447 2657636 - 2657619 - RH 100 -9.1 -4.96848 | opp_overlap 2657619 TGCCGGATACAAAAA CACCGCC ATAC AGCGGTG TTTTAGGGGCAGATA TERM 3448 2657619 - 2657636 + rH 76 -8.4 -4.07885 | opp_overlap 2657619 TGCCGGATACAAAAA CACCGC CATACA GCGGTG TTTTAGGGGCAGATA CKO_02865 2658523 - 2657663 - | hypothetical protein CKO_02864 2658450 - 2658629 + | hypothetical protein CKO_02866 2658738 - 2658583 - | hypothetical protein TERM 3449 2658755 - 2658732 - G 100 -8.8 -5.76633 | GCAGACACAAAAAAA GCCGCACCCC GTGC AGGATGCAGC GTCATAAGAACACAT TERM 3450 2658795 - 2658768 - R 75 -9.8 -3.48378 | opp_overlap 2658767 2658786, overlap 2658766 2658771 AGCGTCATAAGAACA CATCGCCTGCCT TTCC AGGCAAGCGGCG GCTTACTGTTAACCC TERM 3451 2658792 - 2658771 - R 78 -12.3 -2.58243 | opp_overlap 2658767 2658786, overlap 2658768 2658766 GTCATAAGAACACAT CGCCTGCCT TTCC AGGCAAGCG GCGGCTTACTGTTAA CKO_02867 2659649 - 2658804 - | hypothetical protein TERM 3452 2659028 - 2659051 + g 71 -9.5 -3.54459 | CCATTTTGGAGCGCA CGGCGCCGA CGTCAT TCAGCGCCG TTTCCAGAGAGTTCA TERM 3453 2659781 - 2659768 - R 70 -2.5 -4.94972 | opp_overlap 2659773, overlap 2659773 CACCACAACGAAAAA TTAAA TTCA TTTAA TGAAAATTTATTTAA TERM 3454 2659785 - 2659773 - R 70 -4.9 -4.37737 | opp_overlap 2659773, overlap 2659768 CAACGAAAAATTAAA TTCAT TTA ATGAA AATTTATTTAAAGAT CKO_02868 2660394 - 2660257 - | hypothetical protein TERM 3455 2660811 - 2660791 - gH 72 -4.7 -4.64676 | overlap 2660794 CGATCCCGAAGAAAA TCATCTTCC GCT GGAAGAAAA CGCCCCCTCCGATTT TERM 3456 2660896 - 2660879 - gH 72 -9.1 -3.61398 | CCTGTCGCGGAACAA GCGAACG ATAT CGTCCGC GTCACGCCGCCTGCA TERM 3457 2660945 - 2660933 - gH 76 -3.4 -5.09225 | opp_overlap 2660939 AGGCCAGTGAAAAAA TCCA TCCAC TGGA CCACCGTGTTTTTAC CKO_02869 2660426 - 2661379 + | hypothetical protein CKO_02870 2661351 - 2661821 + | hypothetical protein TERM 3458 2661858 - 2661823 - T 83 -14 -2.53164 | overlap 2661829 CCATCCAGCAGTAAG TCAAAACCGGAGGCGG AGGC CCGCTTCCGGTTACGA TAATCACCCCAGCAA TERM 3459 2661852 - 2661829 - T 100 -13.8 -4.30416 | overlap 2661823 AGCAGTAAGTCAAAA CCGGAGGCGG AGGC CCGCTTCCGG TTACGATAATCACCC CKO_02871 2662866 - 2661862 - | hypothetical protein TERM 3460 2662792 - 2662847 + g 83 -7.5 -4.60041 | gap 2, opp_overlap 2662803, overlap 2662772 2662792 GCGGCCGACCGTTTG CGGCG-CATCAATG-CTTCCGCGCCCG GTTG CGGGCGCGGAAGTCGTAAGGGACGTTG TTTTTAAACCTACCT TERM 3461 2662792 - 2662844 + g 85 -9 -4.41633 | gap 1, opp_overlap 2662803, overlap 2662772 2662792 GCGGCCGACCGTTTG CGGCGCATCAATGCTTCCGCGCCCG GTTG CGGGCGCGGAAGTCGTAAGG-GACG TTGTTTTTAAACCTA TERM 3462 2662834 - 2662803 - G 93 -15.8 -3.14132 | opp_overlap 2662792 2662792 TTTGCGGCGCATCAA TGCTTCCGCGCCCG GTTG CGGGCGCGGAAGTC GTAAGGGACGTTGTT CKO_02872 2663756 - 2662872 - | hypothetical protein CKO_02873 2665197 - 2663812 - | flagellar hook-associated protein FlgK TERM 3463 2664072 - 2664091 + g 70 -2.8 -4.75174 | overlap 2664073 2664088 TCATATTTCCCAGAC CCGGAATA TCCG TCTTCTGG TTTTTCAGTTCGATC CKO_02874 2665590 - 2665201 - | peptidoglycan hydrolase CKO_02875 2666703 - 2665600 - | flagellar basal body P-ring protein CKO_02876 2667368 - 2666703 - | flagellar basal body L-ring protein TERM 3464 2667280 - 2667290 + g 74 -2.4 -5.00616 | overlap 2667268 2667267 TCCGGCGGCGCATAC GCCG CAT CGTC TTTTTTCACCAGCAA CKO_02877 2668180 - 2667395 - | flagellar basal body rod protein FlgG TERM 3465 2667802 - 2667813 + g 79 -7.2 -4.4017 | GCGCATTCGTCAGCA CGCC ATCT GGCG TTTTCTGGAAATTAC TERM 3466 2668073 - 2668049 - G 73 -5.8 -4.38712 | opp_overlap 2668049 2668053 2668064, overlap 2668051 2668063 CTGATTCTGATAAAA CAGATCG-GCGA ACA TCGCGCGATC-G CGTTTAAACCCGGTG TERM 3467 2668072 - 2668051 - G 76 -9.5 -3.80133 | gap 1, opp_overlap 2668049 2668053 2668064, overlap 2668049 2668063 GATTCTGATAAAACA GATCG-GCGA ACA TCGCGCGATC GCGTTTAAACCCGGT CKO_02878 2668933 - 2668202 - | flagellar basal body rod protein FlgF CKO_02879 2670123 - 2668933 - | hypothetical protein TERM 3468 2669103 - 2669093 - G 71 -8.2 -3.81259 | overlap 2669085 ACAGAACCCAGCAAA CCGG TGC CCGG CGTTCCAGTCAGCGG CKO_02880 2670841 - 2670158 - | flagellar basal body rod modification protein CKO_02881 2671269 - 2670844 - | flagellar basal body rod protein FlgC TERM 3469 2671151 - 2671172 + g 71 -10.1 -3.60792 | opp_overlap 2671126 2671149 CGGGCTTTATAGACG CCGTCTTCG GTGG CGGAGGCGG TTTCCGCATTAGCGA CKO_02882 2671643 - 2671293 - | hypothetical protein CKO_02883 2671722 - 2672513 + | flagellar basal body P-ring biosynthesis protein FlgA CKO_02884 2672616 - 2672485 - | hypothetical protein CKO_02887 2672988 - 2672725 - | hypothetical protein CKO_02885 2672645 - 2672917 + | hypothetical protein TERM 3470 2673044 - 2673012 - gH 77 -12 -2.91912 | gap 1 TGATTTACTCATACA GCAGCGCGAC-CACA TTAT TGCGCGCCGCGCCGC AGAGCTTGACGTGCT CKO_02886 2672920 - 2673357 + | hypothetical protein CKO_02888 2673431 - 2674678 + | hypothetical protein TERM 3471 2675155 - 2675139 - g 72 -3.7 -4.71828 | ATCTGATTAATAAAA CATTTCA TGC CGAAACG TTCTTTAATCACTGC TERM 3472 2675255 - 2675269 + G 80 -4.2 -5.03314 | ACATATGCTCATATG CGGTTT AAG ACACCG TTTTTTGAGGATGAA CKO_02889 2674697 - 2675770 + | hypothetical protein TERM 3473 2675825 - 2675795 - T 83 -13.4 -3.18582 | opp_overlap 2675796 2675797, overlap 2675797 CACGCTATTTAGCAA TACGATTGGCTATG CCG CATAGCCAATCGCT TTTACCAGATATTCC TERM 3474 2675796 - 2675824 + T 100 -14.7 -4.11371 | opp_overlap 2675795 2675797, overlap 2675797 ACGCTATTTAGCAAT ACGATTGGCTATG CCG CATAGCCAATCGC TTTTACCAGATATTC TERM 3475 2675797 - 2675823 + T 100 -18.2 -3.06341 | opp_overlap 2675797 2675795, overlap 2675796 CGCTATTTAGCAATA CGATTGGCTATG CCG CATAGCCAATCG CTTTTACCAGATATT TERM 3476 2675823 - 2675797 - T 100 -18.2 -3.1552 | opp_overlap 2675796 2675797, overlap 2675795 CGCTATTTAGCAATA CGATTGGCTATG CCG CATAGCCAATCG CTTTTACCAGATATT CKO_02890 2676859 - 2675870 - | hypothetical protein CKO_02891 2677809 - 2676868 - | hypothetical protein TERM 3477 2677245 - 2677259 + g 80 -4.2 -5.08824 | ACAGCTCGCTCATTT TCAGCG CCA CGCTCA TTTTTTCAGTCAGCG CKO_02892 2679228 - 2677843 - | hypothetical protein TERM 3478 2678320 - 2678335 + g 71 -4.6 -4.65895 | CAGTTCCGCCCGTTC CGCCGA CGCC TCCGCG TTTTTCGCTACCGGC TERM 3479 2678699 - 2678710 + g 100 -4.4 -5.75342 | GCTTTTGTCGCATCG TCGT CATA ACGA TTTTTTTTCAACAAA TERM 3480 2679249 - 2679261 + r 76 -4.7 -4.88786 | opp_overlap 2679236, overlap 2679250 2679253 AACGCGAAGACGTTT GCGGG AAA CCCGG TTTGTTTCTTTTCAT CKO_02893 2679725 - 2679282 - | hypothetical protein TERM 3481 2679391 - 2679412 + g 74 -2.2 -5.055 | CGGTCAGCGCGTTTA GCGTCGAG AACCAG CTCAATGC TTTTTTCCCGCTTCG CKO_02894 2681051 - 2679732 - | hypothetical protein CKO_02895 2681796 - 2681038 - | flagellar assembly protein H CKO_02896 2682837 - 2681800 - | flagellar motor switch protein G TERM 3482 2682762 - 2682802 + gr 74 -3.1 -4.98255 | gap 1, overlap 2682782 TCATCAGCAGGATCG CCGC-CTGCTCCAGACGG CTGCGC CCGGCTGAGGCTGAGTGG TTTTTATCATTCCGG CKO_02897 2684431 - 2682809 - | flagellar MS-ring protein TERM 3483 2684206 - 2684236 + gr 87 -10.3 -4.08485 | overlap 2684207 CCGCGCTGATGCCTT TTGCCGCCAGCGC CATTC GCGCCTGCGGCAG TTTGCTTTCGCTCAC TERM 3484 2684207 - 2684235 + gr 78 -11.6 -3.04609 | overlap 2684206 CGCGCTGATGCCTTT TGCCGCCAGCGC CATTC GCGCCTGCGGCA GTTTGCTTTCGCTCA CKO_02898 2684879 - 2684511 - | hypothetical protein TERM 3485 2684594 - 2684584 - G 78 -6.8 -4.58663 | opp_overlap 2684584 ATCATGGCCGAAAAA GCCA CGC TGGC TTTCTGACTTTCGAT TERM 3486 2684801 - 2684778 - G 70 -9.6 -3.4404 | gap 1, opp_overlap 2684799, overlap 2684776 2684780 AGCGATAGTTAAAGA GACGTCAACCG AAC CGGCTGACG-C TAATGAAGCGGTTTG TERM 3487 2684800 - 2684780 - G 87 -13.3 -3.28866 | opp_overlap 2684799, overlap 2684778 2684776 CGATAGTTAAAGAGA CGTCAACCG AAC CGGCTGACG CTAATGAAGCGGTTT CKO_02899 2685930 - 2684899 - | hypothetical protein TERM 3488 2685377 - 2685335 - G 73 -6.3 -4.431 | gap 1, opp_overlap 2685347 TATTTAGTGATAAAA CGCTGGGCCAACGGCAGG ATGTCCTG CCTGC-GTTCACGCAGCG GCGTAATATGAATAG TERM 3489 2685657 - 2685625 - G 71 -9.9 -3.5393 | opp_overlap 2685647, overlap 2685647 ATTAGCCTGCTCAAA TTTACCGGCGACACT CGC AACAGCGCCGGTAAA CGCGCCTTTCTCGTA TERM 3490 2686309 - 2686336 + H 82 -7.8 -4.59773 | overlap 2686312 CGACAGCGACGTTTC TTCTGTGTTGCT CAAG AGCGACACATAA TTTTTAAAACTCAAA TERM 3491 2686312 - 2686333 + H 71 -9.5 -3.24422 | overlap 2686309 CAGCGACGTTTCTTC TGTGTTGCT CAAG AGCGACACA TAATTTTTAAAACTC CKO_02900 2686441 - 2687325 + | hypothetical protein CKO_02901 2687318 - 2687716 + | hypothetical protein CKO_02902 2687713 - 2688465 + | flagellar biosynthesis protein FliP CKO_02903 2688468 - 2688740 + | hypothetical protein CKO_02904 2688747 - 2689520 + | hypothetical protein TERM 3492 2689614 - 2689639 + G 73 -5.3 -4.62471 | overlap 2689612 GCTCAAAAGATCTGA CGATGGCGGCG GGAC TGCTGGCGTCG TTTTTCACCCTTGCC CKO_02905 2689520 - 2690653 + | flagellar biosynthesis protein FlhB TERM 3493 2691396 - 2691423 + G 75 -11.2 -3.40403 | GTCGCCCAGATCCCG TCGCTGCTGCTG GCGA CTGCCGCAGCGA TTATCGTGACCCGCG TERM 3494 2692210 - 2692165 - g 75 -13.1 -2.67694 | opp_overlap 2692163, overlap 2692162 ACTATGACGATATTA CCCACCTGCATGCGCGCCTGG CGCT CCAGGCGCCAAAGCTGGCGGA GGATTTAAATGCCGC CKO_02906 2690640 - 2692736 + | flagellar biosynthesis protein FlhA TERM 3495 2692756 - 2692777 + T 79 -10.2 -3.59979 | opp_overlap 2692756 CAGGAGATCGACAAA GGAGATCG CGATGA CGATCTCC TTTCCCATAACGACA TERM 3496 2692777 - 2692756 - T 87 -10.9 -3.95787 | opp_overlap 2692756 CAGGAGATCGACAAA GGAGATCGC GATG ACGATCTCC TTTCCCATAACGACA CKO_02907 2693786 - 2692797 - | hypothetical protein CKO_02908 2695879 - 2694338 - | hypothetical protein TERM 3497 2695006 - 2695022 + g 78 -6.5 -4.65263 | AGCGGGCCAGAACTT CCGCG CCAATCA CGCGG TTTGTTTTGGCGCAT TERM 3498 2695973 - 2695962 - R 73 -2.2 -5.16841 | TGACAGCAATAAAAA GGAT GGAT ACCC AATTTGCATGTAACG CKO_02909 2696375 - 2696031 - | hypothetical protein CKO_02910 2696687 - 2697217 + | hypothetical protein CKO_02911 2697881 - 2697333 - | hypothetical protein TERM 3499 2697385 - 2697407 + g 76 -2.7 -5.06451 | GTCTGACTGTCATTC GCGGTTT TAAACGAAT AAGCCGC TTTTTTCCCCTCATG CKO_02912 2698305 - 2698496 + | hypothetical protein TERM 3500 2698538 - 2698567 + T 100 -8.7 -5.40072 | overlap 2698539 TGACTCCGTGTGCCT TGTCGCATAAGTA ACTC TATTTATGCGACC TTTTTTTAAACCACA TERM 3501 2698539 - 2698566 + T 93 -12.2 -3.83561 | overlap 2698538 GACTCCGTGTGCCTT GTCGCATAAGTA ACTC TATTTATGCGAC CTTTTTTTAAACCAC CKO_02913 2699328 - 2698573 - | hypothetical protein TERM 3502 2698854 - 2698874 + g 86 -6.8 -5.02476 | CTGCCTGACTCCGCG TACAGGCC CTGTC GGCCAGTA TTTTTTGCGCAATCT CKO_02914 2699411 - 2699818 + | hypothetical protein CKO_02916 2700686 - 2700447 - | hypothetical protein CKO_02915 2700547 - 2701170 + | hypothetical protein TERM 3503 2701485 - 2701461 - g 76 -2.8 -5.11254 | overlap 2701464 2701480 AAGAACAAAAAGAAA CAACGGTTCA GCTGA TTAACCGTGG CAACAGTCCGGCGTT CKO_02917 2701352 - 2702050 + | hypothetical protein TERM 3504 2702343 - 2702355 + G 70 -9.1 -3.68569 | opp_overlap 2702342 2702341 CAGCATGAAAATATT GCCCA GCT TGGGC TTCTTCCCTCAATAG CKO_02918 2702070 - 2702480 + | hypothetical protein CKO_02919 2702550 - 2704520 + | hypothetical protein TERM 3505 2704712 - 2704690 - g 76 -10.6 -3.68351 | opp_overlap 2704689, overlap 2704693 CCCTCAGCAGCGAAA CCACAGGTTC GCA GAACCTGTCG CTGTCATCCGGTACG CKO_02920 2704536 - 2705627 + | hypothetical protein TERM 3506 2705849 - 2705865 + G 77 -3.8 -5.12916 | TATCATGGTGTGTTT TAATAG CATCA CTATTA TTTTCTTATTTTATA CKO_02921 2705767 - 2705895 + | hypothetical protein TERM 3507 2706340 - 2706350 + G 70 -6.8 -4.14013 | TACGCGTAACAGTTA CCTG CTT CAGG TTTTGCGAAGTTTTC CKO_02922 2706032 - 2706727 + | hypothetical protein CKO_02923 2706780 - 2707445 + | hypothetical protein TERM 3508 2707696 - 2707706 + G 95 -5.4 -5.33405 | CGGGTTTACTCGACA GGTT AAT AACC TTTTTCTTTAGTAAG TERM 3509 2707988 - 2707966 - g 74 -2.6 -5.02476 | ACATCTCTGAAAAAA CGGTCTCTTA CTA CAAGAGGTCG GCATTAAAAAAGATG CKO_02924 2707491 - 2708078 + | hypothetical protein TERM 3510 2708296 - 2708276 - g 79 -3.2 -5.1471 | gap 1, opp_overlap 2708279 2708280 2708285, overlap 2708277 2708278 AGCATAAAAAACAAA CTGGCAGCC TCCT GGCTGGC-G CTGGGGTTGTTCGCA TERM 3511 2708459 - 2708434 - g 70 -3.2 -4.72188 | overlap 2708435 2708436 TGAACGCAAAACAAA CCTGGGCG GGACGCTAAT CGCCCACG CCGCGCTGCTGAAAG CKO_02925 2708258 - 2709139 + | hypothetical protein TERM 3512 2709149 - 2709161 + G 70 -3.3 -4.82901 | AAATAGGGTACGACC GTGAC AAC GACAC TTTTTCTGGGCGACG TERM 3513 2709787 - 2709740 - g 100 -14 -4.07568 | gap 1, opp_overlap 2709719 2709717 2709785 CCGCTGCGTGGAAAA GACG-GGCTGGCGCTGGTGTCGT CTA ACGCCGCCAGCGTCGGCCTCGCC GCGCTGCTGCTGCAC CKO_02926 2709149 - 2710693 + | hypothetical protein TERM 3514 2710841 - 2710861 + G 81 -3.9 -5.15969 | overlap 2710836 2710844 GACTGTATGCGCTGG TGATGGCGG TCA CCGGCATGA TTTTTTCCATTCCAG CKO_02927 2710693 - 2711316 + | hypothetical protein CKO_02928 2711313 - 2711945 + | hypothetical protein TERM 3515 2712639 - 2712664 + G 84 -8.9 -4.36914 | overlap 2712635 GCTGAAGTGCTCTCG GCCCCGGCGGA TGAG TTCGTCGCGGC TTTTGTCGGCAGCGA CKO_02929 2711958 - 2712929 + | hypothetical protein TERM 3516 2713503 - 2713488 - g 100 -7.6 -5.40474 | ATCTCGGCAAAAAAA TCATCG TTAC CGATGA CTGGGAAAGCTGCGT CKO_02930 2712926 - 2713930 + | hypothetical protein TERM 3517 2714294 - 2714278 - g 72 -12.3 -2.55351 | overlap 2714277 CTGGCGTATACCAAC CCGGAGT CGC ACTCCGG CTATAACGCGGTACG CKO_02931 2713927 - 2714733 + | hypothetical protein CKO_02932 2715718 - 2714786 - | hypothetical protein TERM 3518 2715184 - 2715158 - G 71 -4.4 -4.60041 | gap 1, overlap 2715160 ATGCAGTCGCAAAAA CGCCTGGCTGC ATACTG GCA-CCATGCG CCCGGAAATCAGTTT TERM 3519 2715964 - 2715980 + G 71 -5.9 -4.32048 | GATCGCGCTGGGCTA TACCATG GTG TATGGTA TTTTGCGTATTATTA TERM 3520 2716436 - 2716422 - g 72 -11.4 -3.06696 | TGCTGGTTGAATACA CTCGCC TCG GGCGAG GCATGCGCGCAGTGG CKO_02933 2715851 - 2716840 + | hypothetical protein TERM 3521 2717213 - 2717226 + G 83 -8.1 -4.4078 | overlap 2717188 TGCGGCACTGGTCGC TGCCG TATG CGGCA TTTTGCTTGGCGCAC CKO_02934 2716851 - 2717957 + | hypothetical protein TERM 3522 2718665 - 2718639 - g 74 -7.8 -4.15565 | opp_overlap 2718654 2718654 TCGATTACGGCAAAA CGCTGGCCTGCG GCA CGCCGGATAGCG TGCGTCGCGACCCGG CKO_02935 2717954 - 2718721 + | hypothetical protein TERM 3523 2719310 - 2719298 - g 75 -6.2 -4.67982 | GCTCATTGAACAAAA CGCC CGACT GGCG CTGGAAGTAACCGAC CKO_02936 2718714 - 2719433 + | hypothetical protein TERM 3524 2720171 - 2720185 + G 75 -12.8 -2.62263 | CGTGGATAGCCAGGC CGCGCC GCT GGCGCG TCGTATCAAACAGCT TERM 3525 2720455 - 2720436 - g 73 -5.6 -4.65895 | opp_overlap 2720441 2720451, overlap 2720438 GCTGCGATGGAAAAA GCCGACTC TGTC GATCCGGC TGAGTATCTGCCGGT TERM 3526 2720451 - 2720469 + G 71 -10.2 -3.29144 | opp_overlap 2720436, overlap 2720441 2720462 GCCGACTCTGTCGAT CCGGCTGA GTA TCTGCCGG TTCTGCGCGCAATAA CKO_02937 2719461 - 2720618 + | hypothetical protein CKO_02938 2720636 - 2721118 + | hypothetical protein TERM 3527 2721512 - 2721496 - g 80 -10.8 -3.83844 | TGGACCAATGAAGAA GGCGCG CGCTT CGCGCC AGCAATGCTGGCCTC CKO_02939 2721115 - 2722338 + | hypothetical protein TERM 3528 2722912 - 2722900 - g 74 -2.7 -4.93696 | overlap 2722901 TTGAAATATTAAAAA CCAAT ATT ATTGA CAAAAAGAACAACGA CKO_02940 2722608 - 2723591 + | hypothetical protein TERM 3529 2723797 - 2723822 + G 73 -8.9 -3.8709 | opp_overlap 2723812 GTATTGATATTGTTA GTGATGGCGAG CAAA CGCGCCAACAC TTTGTCACCACGTTT TERM 3530 2723917 - 2723949 + G 74 -2 -5.07486 | gap 1, overlap 2723917 2723918 ATGCGAGCGTACCGA C-CGTTGTTGATGCG GTAG CGCGTCAAAAACCCG TTTTTGTTGAAGATG TERM 3531 2724158 - 2724170 + G 81 -4.1 -5.15634 | CCAGTTTGATGAGCC CGCAT TTA ATGTG TTTTTTGATGAAGTG TERM 3532 2724228 - 2724216 - g 70 -3.3 -4.82901 | GCCGCGTTAGAAAAA GCCAT TGA AGGGC TAAAATGCGAAACCG CKO_02941 2723619 - 2724650 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase CKO_02942 2725126 - 2724794 - | hypothetical protein TERM 3533 2725848 - 2725863 + r 84 -4.7 -5.32599 | ATTAACGTGTCAGGA CAGAC TATTGC GTCTG TTTTTCTGTTTTATA CKO_02943 2726877 - 2725852 - | hypothetical protein CKO_02944 2728312 - 2726906 - | hypothetical protein TERM 3534 2727862 - 2727884 + g 84 -13.4 -3.15544 | CGGTGTACCCTTCCG GCAGGGGCAA CAC TGGCCCCTGC TTGGTAAAACTGCCA CKO_02945 2729682 - 2728312 - | hypothetical protein TERM 3535 2728593 - 2728554 - G 78 -6.4 -4.8048 | gap 1 GGTTGATACCAAAAA TCGCCGCT-TCGGTGATGC CCA GCATCGCAGAGAACGCCGA CGGTAATGTAATGGC TERM 3536 2729742 - 2729722 - R 100 -14.7 -4.08216 | TTATGGTGTTTAAAA CGCTCCCGC CAC GCAGGAGCG TGAAGGCTTAGAACC CKO_02946 2731267 - 2729750 - | hypothetical protein CKO_02947 2732344 - 2731439 - | aminoimidazole riboside kinase TERM 3537 2731484 - 2731507 + g 80 -12.4 -3.31263 | CATTGCCCCTTTGGC CGTTGTGGCG AGTG CGCCGCAGCG TTGTGCGAGTCCGAT CKO_02948 2732468 - 2732737 + | hypothetical protein CKO_02949 2733271 - 2733116 - | hypothetical protein CKO_02950 2733688 - 2733302 - | hypothetical protein CKO_02952 2735414 - 2734161 - | gamma-glutamyl phosphate reductase TERM 3538 2735163 - 2735135 - G 78 -11.7 -3.16191 | overlap 2735138 GCAGACCGCCATCAA TCACCTGTCCGAC CGG GTCGGCCAGGTTA CACACCTGACGGACG TERM 3539 2735160 - 2735138 - G 79 -13.4 -2.78216 | overlap 2735135 GACCGCCATCAATCA CCTGTCCGAC CGG GTCGGCCAGG TTACACACCTGACGG TERM 3540 2735267 - 2735292 + g 71 -11.2 -2.90617 | overlap 2735266 2735269 CGCGCGCCTCGGCAA CGTCCTGAGC ATTAGC GCTCAGGATG CTTTCAGTTTGCGCT CKO_02953 2736529 - 2735426 - | gamma-glutamyl kinase CKO_02954 2736596 - 2736748 + | hypothetical protein TERM 3541 2736914 - 2736902 - g 79 -3.4 -5.19328 | AGTGTATAACAAAAA CAGT AATAA ACTG GACGTGTATGGCAAA CKO_02955 2736813 - 2737871 + | outer membrane phosphoporin protein E TERM 3542 2737883 - 2737917 + T 75 -11.5 -2.94337 | gap 1, overlap 2737880 2737878 2737894 CTGATTGTCTTAATT TGCCGGATGACGACGC TCAG GCGTC-TTATCCGGCC TACTCTTTTGCACTG CKO_02956 2738374 - 2737976 - | DNA-binding transcriptional regulator Crl CKO_02957 2739676 - 2738432 - | fermentation/respiration switch protein TERM 3543 2739762 - 2739738 - R 100 -17.9 -5.75342 | opp_overlap 2739735 TGCGGCTAAAAAAAA CAACGCCCGGC ATT GCCAGGCGTTG AAAATTTCAGTGATT CKO_02958 2740234 - 2739776 - | xanthine-guanine phosphoribosyltransferase TERM 3544 2740511 - 2740534 + H 72 -4.7 -4.57837 | gap 1, opp_overlap 2740513 CTGAACTGTCTCAAT TATCTCCACA ACCGC TGTGG-GATA TTTTTGCAAAAATCT CKO_02959 2740600 - 2741949 + | hypothetical protein TERM 3545 2741978 - 2742036 + T 74 -11.1 -2.8372 | gap 1, opp_overlap 2741965 2741964 2741997 2742001 2742002, overlap 2741979 ATGCCGGATGGCGCT GCGCTTATCCGGCCTACAACTAACCCGG CCTA CACGCTGATTTGTAGGCCGGATAAG-GC ATTTACTCCGCCATC TERM 3546 2742034 - 2741997 - T 79 -12.1 -3.29144 | opp_overlap 2741978 2741979, overlap 2742001 2742002 TTATCCGGCCTACAA CTAACCCGGCCTACA CGCTGATT TGTAGGCCGGATAAG GCATTTACTCCGCCA TERM 3547 2742030 - 2742001 - T 79 -11.5 -3.44146 | opp_overlap 2741978 2741979, overlap 2741997 2742002 CCGGCCTACAACTAA CCCGGCCTACA CGCTGATT TGTAGGCCGGA TAAGGCATTTACTCC TERM 3548 2742029 - 2742002 - T 78 -12.8 -2.66274 | opp_overlap 2741978 2741979, overlap 2742001 2741997 CGGCCTACAACTAAC CCGGCCTACA CGCTGATT TGTAGGCCGG ATAAGGCATTTACTC CKO_02960 2743123 - 2742068 - | DNA polymerase IV TERM 3549 2743396 - 2743409 + G 91 -3.8 -5.46657 | opp_overlap 2743387 2743405, overlap 2743405 AAGGAATAAGCAGTA TGCG TAAAAT CGCA TTTTTTCTTGCGATG CKO_02961 2743395 - 2744135 + | hypothetical protein CKO_02962 2744873 - 2744106 - | hypothetical protein TERM 3550 2744146 - 2744167 + g 76 -8.7 -4.07246 | opp_overlap 2744138 2744137 AATAATCGCCATTCG CCTGGCATA ATCT TTTGCCAGG TTTCATTTCCCGTCA CKO_02963 2745600 - 2745004 - | phosphoheptose isomerase TERM 3551 2745655 - 2745674 + H 71 -3.4 -4.90477 | opp_overlap 2745655 2745650 2745665, overlap 2745650 AAGCGAGAAGCACAA GCCACAGG AATG CCGCTGGC TTTTGATTTTTTGTG CKO_02965 2745821 - 2748268 + | acyl-CoA dehydrogenase TERM 3552 2748304 - 2748287 - f 93 -14.1 -3.53444 | opp_overlap 2748287 TCACCTCCCCTGAAA GCCCCGC TTCT GCGGGGC TTTTTATTGCCACAT TERM 3553 2748287 - 2748304 + F 100 -14.1 -5.06816 | opp_overlap 2748287 TCACCTCCCCTGAAA GCCCCGC TTCT GCGGGGC TTTTTATTGCCACAT CKO_02966 2748328 - 2749146 + | hypothetical protein TERM 3554 2749256 - 2749219 - T 87 -10.2 -4.19238 | gap 2, opp_overlap 2749227, overlap 2749222 2749227 TGTTGAAGGCTAAAA CGACGAAAGCCTGAATCA TTTC TGATTCAGGCTTTC-T-G AATAGTGGCGGAACG TERM 3555 2749255 - 2749222 - T 93 -15.5 -3.11289 | opp_overlap 2749227, overlap 2749219 2749227 TGAAGGCTAAAACGA CGAAAGCCTGAATCA TTTC TGATTCAGGCTTTCT GAATAGTGGCGGAAC TERM 3556 2749250 - 2749227 - T 100 -14 -3.93057 | opp_overlap 2749227, overlap 2749222 2749219 GCTAAAACGACGAAA GCCTGAATCA TTTC TGATTCAGGC TTTCTGAATAGTGGC TERM 3557 2749227 - 2749250 + T 100 -14 -3.93695 | opp_overlap 2749222 2749219 2749227 GCTAAAACGACGAAA GCCTGAATCA TTTC TGATTCAGGC TTTCTGAATAGTGGC CKO_02968 2750212 - 2749472 - | DNA polymerase III subunit epsilon TERM 3558 2750380 - 2750368 - g 79 -3.4 -5.14563 | GCGGCCATGAAAAAA CCTT TAGTG AAGG ATATAGCCTCACAAC TERM 3559 2750646 - 2750634 - g 70 -6.9 -4.14392 | TGGGAATGGGTAAAA GGCCA TGC CGGCC ATCCTGAAAACGAAC CKO_02969 2750268 - 2750735 + | ribonuclease H CKO_02970 2751454 - 2750732 - | hypothetical protein TERM 3560 2750777 - 2750793 + g 84 -2.9 -5.34857 | overlap 2750747 2750746 CGCGCCCACGGCCTG GCGAATC CGC GCTTTGC TTTTATTTTGTTTCA TERM 3561 2752196 - 2752186 - g 80 -5.4 -4.88895 | AAACAAAGAAACAAA GTTG CAA CAAC CTGAAGAGCGTTTTG CKO_02971 2751488 - 2752243 + | hydroxyacylglutathione hydrolase CKO_02972 2752315 - 2753682 + | membrane-bound lytic murein transglycosylase D TERM 3562 2753700 - 2753722 + T 100 -10.6 -5.72622 | opp_overlap 2753700 GCATGACTCAGAAAA GGCACTGG TTTCCCC CCAGTGCC TTTTTTATTTATGCC TERM 3563 2753722 - 2753700 - T 93 -10.6 -4.43844 | opp_overlap 2753700 GCATGACTCAGAAAA GGCACTGG TTTCCCC CCAGTGCC TTTTTTATTTATGCC CKO_02973 2754501 - 2753731 - | hypothetical protein TERM 3564 2754557 - 2754533 - R 74 -5.7 -4.64861 | gap 1, opp_overlap 2754556 TGTTTGCAAAATAAA GGGCAGCACC ACTTCA GGC-CTGCCC CACGGCAGACCTGAC CKO_02974 2755357 - 2754578 - | hypothetical protein TERM 3565 2755408 - 2755427 + H 77 -9.2 -4.00486 | opp_overlap 2755394 2755411 CCTCTGTAACGTCAA CCAGCCCG GGCA CGGACTGG TTATTCTGTTATAGG TERM 3566 2756578 - 2756561 - g 93 -9.1 -4.68593 | GCGATCATGTAAAAA CAGCCCC CGAA GGAGCTG TAAAAGAGGGTTAAG CKO_02975 2755678 - 2756592 + | hypothetical protein CKO_02976 2757420 - 2756617 - | 2,5-diketo-D-gluconate reductase B TERM 3567 2756655 - 2756686 + g 100 -8.7 -5.0916 | opp_overlap 2756655 CTTCCGGGCTGACAA GGCGATCGTTGCA GTCCAG TGCGGCAATCGCC TTTTTATCTTCGGCA TERM 3568 2757549 - 2757574 + r 83 -13.3 -3.18264 | opp_overlap 2757551, overlap 2757551 CAGCAGGCAAGAAAA AAGCCCTGAGC GTTA GCTCAGGGCTC TTAATAAGTGGCGGA TERM 3569 2757572 - 2757551 - R 100 -15.9 -5.4833 | opp_overlap 2757551 2757549 GCAGGCAAGAAAAAA GCCCTGAGC GTTA GCTCAGGGC TCTTAATAAGTGGCG TERM 3570 2757551 - 2757572 + r 100 -15.9 -3.1552 | opp_overlap 2757551, overlap 2757549 GCAGGCAAGAAAAAA GCCCTGAGC GTTA GCTCAGGGC TCTTAATAAGTGGCG TERM 3571 2760333 - 2760345 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3572 2761106 - 2761119 + r 75 -6.7 -4.45807 | overlap 2761110 ACTGAAGTCTCAATC GCAAG ACGC CTTGC TTCTTTCTTTTCATC TERM 3573 2762894 - 2762906 + r 71 -7.7 -4.00532 | CTCTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 3574 2762926 - 2762940 + r 79 -4.2 -5.22289 | opp_overlap 2762926, overlap 2762915 2762927 CTCTTTCAGAGTCAA CCCTGA ATT TCAGGA TTTTTCTCTTTAATC CKO_02982 2763120 - 2762980 - | hypothetical protein TERM 3575 2763223 - 2763205 - H 83 -2.4 -5.63236 | opp_overlap 2763213, overlap 2763207 ATGGAAAAAGAAAAA TTCGCG AGCGTTG CGCAAA CGTTTTCGTTACAAT TERM 3576 2763268 - 2763309 + H 100 -20.5 -2.96216 | opp_overlap 2763257 2763255, overlap 2763257 2763270 AGGATGCCCCGTAAG GGGCGTTAGCTGAGTTTTT CACG AAAAATTCAGCTAACGCTC TCTGTAATAGTCAAA TERM 3577 2763270 - 2763307 + H 100 -19.5 -3.03443 | opp_overlap 2763257 2763255, overlap 2763257 2763268 GATGCCCCGTAAGGG GCGTTAGCTGAGTTTTT CACG AAAAATTCAGCTAACGC TCTCTGTAATAGTCA CKO_02983 2763340 - 2764929 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 3578 2766160 - 2766183 + G 71 -9.6 -3.53091 | GCCTACGCGCTGATG GCAGATATCC GCTG GGATAACTGC TTTAGCCGCAAAGAT CKO_02984 2764945 - 2766234 + | phosphoribosylamine--glycine ligase CKO_02985 2766947 - 2766309 - | hypothetical protein TERM 3579 2766750 - 2766766 + g 70 -10.1 -3.44229 | opp_overlap 2766731, overlap 2766748 GAGCATGTCGCCCTG CCAGCGG TAT TCGCTGG TTGTGGTGCTGCCGT TERM 3580 2766983 - 2766968 - R 100 -11.8 -4.64844 | opp_overlap 2766968 GCCAGACAGACAAAA GGGGCG AGAG CGCCCC TTCATTAAAACTGTT TERM 3581 2766968 - 2766983 + r 82 -11.8 -3.35639 | opp_overlap 2766968 GCCAGACAGACAAAA GGGGCG AGAG CGCCCC TTCATTAAAACTGTT CKO_02986 2767285 - 2767013 - | transcriptional regulator HU subunit alpha TERM 3582 2767063 - 2767074 + g 78 -5.8 -4.72863 | CAAACGCCGGTACAT TCGC TGCA GCGA TTTTGATTTCTTTAC CKO_02987 2768062 - 2767472 - | hypothetical protein TERM 3583 2767507 - 2767534 + g 70 -5.4 -4.40358 | overlap 2767508 CGATATTGCTCTCAC CGGCCTCGCGCA GGTC TGCCCGAAGCCC TTTTATCAGCTCAAT CKO_02988 2768776 - 2768105 - | endonuclease V TERM 3584 2768367 - 2768377 + g 74 -2.4 -5.08824 | opp_overlap 2768353 AGCGGCTCAAACTTG CCGC ACA GCCG TTTTTTCGCTACGCC TERM 3585 2768571 - 2768587 + g 80 -9.4 -4.1891 | ATATACGGCATGGTA GTGGCG ATACG CGCCAC TTTGTATTCCACCAG CKO_02989 2769850 - 2768786 - | uroporphyrinogen decarboxylase CKO_02990 2770663 - 2769890 - | NADH pyrophosphatase CKO_02991 2770760 - 2771263 + | anti-RNA polymerase sigma 70 factor TERM 3586 2771299 - 2771312 + F 71 -9.5 -3.21726 | AATTTACATCCATTG CCCCG TCGC CGGGG TTACATCTTGTCGGA TERM 3587 2773082 - 2773064 - g 75 -6.7 -4.43844 | gap 1, overlap 2773066 TGATCACCTACAAAA TCG-CGGC GCAT GCCGCCGA CCTGGCAAAAGGCCA CKO_02992 2771509 - 2773404 + | thiamine biosynthesis protein ThiC CKO_02993 2773404 - 2774039 + | thiamine-phosphate pyrophosphorylase CKO_02994 2774032 - 2774790 + | hypothetical protein CKO_02995 2774771 - 2774971 + | sulfur carrier protein ThiS CKO_02996 2774973 - 2775743 + | thiazole synthase CKO_02997 2775740 - 2776870 + | thiamine biosynthesis protein ThiH TERM 3588 2776926 - 2776949 + G 100 -8.8 -5.84432 | opp_overlap 2776926 GCGTAATACAAAAAA CGGGAGATTG TCGT CAGGCTCCCG TTTTTTTATGTTGTC TERM 3589 2776949 - 2776926 - g 100 -6.6 -5.47159 | opp_overlap 2776926 GCGTAATACAAAAAA CGGGAGATTG TCGT CAGGCTCCCG TTTTTTTATGTTGTC CKO_02998 2776880 - 2777113 + | hypothetical protein CKO_02999 2777179 - 2777484 + | hypothetical protein CKO_03000 2777489 - 2777806 + | hypothetical protein TERM 3590 2777950 - 2777977 + T 79 -11.4 -3.40403 | opp_overlap 2777957, overlap 2777957 AGCGCCATCAGGCAT AAAAAAACCCGC CGAA GCGGGTTTTTTA TTATGGTCAGCAACG TERM 3591 2777957 - 2777970 + T 100 -9.5 -5.58179 | opp_overlap 2777957, overlap 2777950 TCAGGCATAAAAAAA CCCGC CGAA GCGGG TTTTTTATTATGGTC TERM 3592 2777970 - 2777957 - T 100 -9.5 -5.64274 | opp_overlap 2777957 2777950 TCAGGCATAAAAAAA CCCGC CGAA GCGGG TTTTTTATTATGGTC CKO_03001 2782217 - 2777994 - | DNA-directed RNA polymerase subunit beta' TERM 3593 2780487 - 2780507 + g 77 -11.1 -3.60431 | opp_overlap 2780486 2780487, overlap 2780478 GATCATCCACAGAAT GGCACGGCC GAT GGTCGTGTC TTTCAGGCTGGTTTT CKO_03002 2786355 - 2782294 - | DNA-directed RNA polymerase subunit beta TERM 3594 2783228 - 2783238 + g 79 -3.2 -5.252 | overlap 2783219 2783232 2783235 GTGATTTTGCGGCGT TTCG CTT CGAG TTTTTTCTCGAACTC TERM 3595 2783280 - 2783296 + g 76 -2.9 -5.10033 | overlap 2783281 CGTCGTACTGCTCAG CCAGTTG CTC CAGCTGA TTTTGTTTCTCTTCG TERM 3596 2786602 - 2786577 - R 100 -17.7 -4.64766 | opp_overlap 2786570, overlap 2786597 CTTACAGCGCAAAAA GGCTGGTGACT AAAA AGTCACCAGCC ATCAGCCTAATTTCT CKO_03003 2787007 - 2786642 - | 50S ribosomal protein L7/L12 CKO_03004 2787571 - 2787074 - | 50S ribosomal protein L10 TERM 3597 2787914 - 2787878 - RH 72 -6.6 -4.20368 | gap 1, overlap 2787906 2787907 TTATTTCAACAGAAA CGTGGG-GGTAAGATTG TAGA CAAAATCACCGCCCACG TAAAGGCGAATATTA CKO_03006 2788634 - 2787927 - | 50S ribosomal protein L1 TERM 3598 2788091 - 2788131 + gH 80 -5.3 -4.98255 | opp_overlap 2788099 CTTTCAGTTTGTCAG CGTCAAAATCCACTTTACC GAT GGTGGTGTGGATGATGCCG TTTTTGTCGTTACGG CKO_03007 2789066 - 2788638 - | 50S ribosomal protein L11 TERM 3599 2788742 - 2788765 + Gg 81 -8.2 -4.26681 | gap 1 CTTTGGTCTGCGCGA TTTCCTGCAGC TGA GC-GCGGGAAA TTTTACCTACTTTGT TERM 3600 2788818 - 2788849 + Gg 77 -7.2 -4.30576 | AGACTTAATACCAGC CGCTTTCTTCAGCA GAAC TGCTGCCGGAGGCG TTTTGGTAATGAAGG CKO_03005 2788119 - 2789090 + | hypothetical protein TERM 3601 2789154 - 2789125 - TR 93 -7.3 -5.71712 | gap 1, overlap 2789127 2789152 CGTGATATAAAAAAA TCGTTT-TACGGGC CAG GCCCATAAAAACAA AAGGCGCGAAATTGT TERM 3602 2789190 - 2789152 - TR 100 -16.9 -4.84359 | opp_overlap 2789157, overlap 2789125 2789157 CCAGGCCCATAAAAA CAAAAGGCGCGAAATTG TATTC CAATCTCGCGCCTTGTG CAACGATTAAATCGC TERM 3603 2789157 - 2789185 + Tr 86 -13.2 -3.30159 | opp_overlap 2789152 2789157 CCCATAAAAACAAAA GGCGCGAAATTG TATTC CAATCTCGCGCC TTGTGCAACGATTAA TERM 3604 2789185 - 2789157 - TR 100 -15.4 -5.35224 | opp_overlap 2789157, overlap 2789152 CCCATAAAAACAAAA GGCGCGAAATTG TATTC CAATCTCGCGCC TTGTGCAACGATTAA TERM 3605 2789190 - 2789208 + Tr 75 -3 -5.1675 | AATCTCGCGCCTTGT GCAACGAT TAA ATCGCCGC TTTTTTGATCGCTGC CKO_03008 2789769 - 2789224 - | transcription antitermination protein NusG CKO_03009 2790154 - 2789771 - | preprotein translocase subunit SecE CKO_03010 2790372 - 2790244 - | hypothetical protein TERM 3606 2790351 - 2790334 - G 95 -11.3 -4.60924 | opp_overlap 2790334 GAAAGCGTGCAAAAA GGGCATC AAAT GATGCCC TTTTATTGCGCATTG TERM 3607 2790334 - 2790351 + g 95 -11.3 -4.65747 | opp_overlap 2790334 GAAAGCGTGCAAAAA GGGCATC AAAT GATGCCC TTTTATTGCGCATTG CKO_03011 2791570 - 2790386 - | elongation factor Tu TERM 3608 2791849 - 2791867 + H 73 -7.4 -4.03234 | overlap 2791852 GATGCCCGCATCCTG GAACTCGG CTA CCCAGTTC TTTCTGTAACAAAAA TERM 3609 2791896 - 2791885 - H 89 -4.4 -5.7946 | opp_overlap 2791885 2791880 TCTGTAACAAAAAAA GAGA CATG TCTC TTTTCTTATTCGAAC TERM 3610 2791885 - 2791896 + H 73 -4.4 -4.89477 | opp_overlap 2791885, overlap 2791880 TCTGTAACAAAAAAA GAGA CATG TCTC TTTTCTTATTCGAAC CKO_03016 2792148 - 2792450 + | hypothetical protein CKO_03017 2792513 - 2793481 + | pantothenate kinase TERM 3611 2793512 - 2793483 - T 81 -12.3 -3.18115 | opp_overlap 2793484 2793490, overlap 2793484 2793490 GGTTGAGAAAATAAT GTAAAAAGGGAGC CTTA GCTCCCTTTTTAT TATTCTGCGCTGCGT TERM 3612 2793511 - 2793484 - T 90 -15.8 -2.50387 | opp_overlap 2793484 2793490, overlap 2793483 2793490 GTTGAGAAAATAATG TAAAAAGGGAGC CTTA GCTCCCTTTTTA TTATTCTGCGCTGCG TERM 3613 2793484 - 2793511 + T 100 -15.8 -3.80733 | opp_overlap 2793484 2793483 2793490, overlap 2793490 GTTGAGAAAATAATG TAAAAAGGGAGC CTTA GCTCCCTTTTTA TTATTCTGCGCTGCG TERM 3614 2793505 - 2793490 - T 100 -10.4 -4.85195 | opp_overlap 2793484 2793490, overlap 2793484 2793483 AAAATAATGTAAAAA GGGAGC CTTA GCTCCC TTTTTATTATTCTGC TERM 3615 2793490 - 2793505 + T 100 -10.4 -5.34365 | opp_overlap 2793490 2793484 2793483, overlap 2793484 AAAATAATGTAAAAA GGGAGC CTTA GCTCCC TTTTTATTATTCTGC CKO_03018 2794474 - 2793512 - | biotin--protein ligase CKO_03019 2795499 - 2794471 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 3616 2795616 - 2795649 + r 74 -8.1 -3.96298 | opp_overlap 2795616 2795623, overlap 2795621 2795623 CCCGGACGCATGAAC GCAAAAAGGCCATCC CTCA GGATGGCCTCTTCAC TTTAATTAATGCCTG TERM 3617 2795649 - 2795616 - R 86 -14.7 -2.50816 | opp_overlap 2795616 2795621 2795623, overlap 2795623 CCCGGACGCATGAAC GCAAAAAGGCCATCC CTCA GGATGGCCTCTTCAC TTTAATTAATGCCTG TERM 3618 2795621 - 2795644 + r 79 -11 -3.338 | opp_overlap 2795616 2795623, overlap 2795616 2795623 ACGCATGAACGCAAA AAGGCCATCC CTCA GGATGGCCTC TTCACTTTAATTAAT TERM 3619 2795642 - 2795623 - R 100 -13.6 -4.7629 | opp_overlap 2795621 2795616 2795623, overlap 2795616 GCATGAACGCAAAAA GGCCATCC CTCA GGATGGCC TCTTCACTTTAATTA TERM 3620 2795623 - 2795642 + r 86 -13.6 -3.22878 | opp_overlap 2795623 2795616, overlap 2795621 2795616 GCATGAACGCAAAAA GGCCATCC CTCA GGATGGCC TCTTCACTTTAATTA TERM 3621 2798388 - 2798400 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3622 2798995 - 2799038 + r 72 -9 -3.48924 | opp_overlap 2798995 2799000, overlap 2799000 CAGATTTTTAAAGAG CAAAACTTCGCAGTGAACCT TTTC AGGTACACTCTGAAGTTTTC TTATATGAGCAGTAA TERM 3623 2799000 - 2799033 + r 93 -8.9 -4.84311 | opp_overlap 2799000 2798995, overlap 2798995 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTTC AGGTACACTCTGAAG TTTTCTTATATGAGC TERM 3624 2799033 - 2799000 - R 75 -6.7 -4.49756 | opp_overlap 2798995 2799000, overlap 2798995 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTTC AGGTACACTCTGAAG TTTTCTTATATGAGC TERM 3625 2801129 - 2801145 + r 78 -5.1 -5.02421 | overlap 2801130 CATAATACGCTTTCC CGCTTGA GAG TCAAGCA TTTATTTTTGCTTTT CKO_03024 2802096 - 2801314 - | glutamate racemase CKO_03025 2803978 - 2802110 - | vitamin B12/cobalamin outer membrane transporter TERM 3626 2804566 - 2804556 - gR 74 -2.4 -5.01497 | AGCAGCAGACAAAAA GCCG TAT CCGC GTCGACAGCTTCCCG TERM 3627 2805384 - 2805357 - gR 79 -11.4 -3.45839 | gap 1, opp_overlap 2805357, overlap 2805351 ACCTGGAAACATTAA GCCAGACGC-ACA ATG TGTCACGTCTGGC TCTGTTCGATCAGTT CKO_03027 2805684 - 2805394 - | hypothetical protein CKO_03026 2804348 - 2805448 + | tRNA (uracil-5-)-methyltransferase TERM 3628 2805690 - 2805720 + Tr 72 -10.5 -2.77192 | gap 2, opp_overlap 2805699, overlap 2805689 TACAAATCATCGTAG GCCGGATAAGGCGGT TAC GCCGCC--ATCCGGC ATTATTCCGCGACTT CKO_03028 2806081 - 2805722 - | hypothetical protein CKO_03029 2806729 - 2806097 - | DNA-binding transcriptional repressor FabR TERM 3629 2806515 - 2806491 - G 76 -12.1 -3.01712 | CCGCCTTTGGCAATA CGCTGACGCGC CTG GCGCATCAGCT GGCGCAGCATTAAAC CKO_03030 2806734 - 2806922 + | hypothetical protein CKO_03031 2806931 - 2808331 + | soluble pyridine nucleotide transhydrogenase CKO_03032 2809231 - 2808314 - | DNA-binding transcriptional regulator OxyR TERM 3630 2809419 - 2809436 + r 100 -12.7 -5.81412 | CCAACGTGAACTTTT GCGGACC CTAT GGTCCGC TTTTTTTTGCATAAA TERM 3631 2809478 - 2809460 - R 74 -5.9 -4.58946 | opp_overlap 2809460 GCATAAATAAAATAA GCCCGAC GTGAT GCCAGGC TCTGATGACTGTTGC TERM 3632 2809545 - 2809533 - R 77 -10.5 -3.30124 | TTGTAGGCCGGATAA GGCGG CAG CCGCC ATCCGGCACAACGCC CKO_03034 2810936 - 2809563 - | argininosuccinate lyase CKO_03035 2811829 - 2811053 - | acetylglutamate kinase CKO_03036 2812841 - 2811837 - | N-acetyl-gamma-glutamyl-phosphate reductase CKO_03037 2812957 - 2814147 + | acetylornithine deacetylase TERM 3633 2814155 - 2814189 + F 100 -13.7 -4.23104 | gap 1 GGCATTAACTGCTTA TCACCTCGC-TACCCC TTTA GTGGTAAGCGAGGTGA TTTATTAACATTTCC TERM 3634 2815417 - 2815387 - g 84 -9 -4.26903 | GCTACCTGATGAAAA GCCTGCGTTCCC GCCTGAT GGCAACGCAAGC CTGGCTGGAAGCGCG TERM 3635 2815820 - 2815851 + G 70 -9.4 -3.64198 | gap 1 CTGTCAAGTGATTGC CG-AAGCGCCGCTGG GTT CCATCGCCGCTTACG TTATCTCTATGGCGA CKO_03038 2814435 - 2817086 + | phosphoenolpyruvate carboxylase TERM 3636 2817106 - 2817133 + F 100 -17 -3.70571 | overlap 2817107 CACGCATCGTCATAT CCCCTCTCGCCC GCCC GGGCGAGAGGGC TTTGAAATATTTCTG TERM 3637 2817107 - 2817132 + F 100 -20.5 -2.8162 | overlap 2817106 ACGCATCGTCATATC CCCTCTCGCCC GCCC GGGCGAGAGGG CTTTGAAATATTTCT CKO_03039 2817305 - 2819038 + | hypothetical protein TERM 3638 2819979 - 2819962 - g 73 -5.5 -4.56597 | opp_overlap 2819950 2819949 2819971, overlap 2819964 CCTGTTTCGTAAAAA TACGGAG CGTT CTCCGTC AGAATATCGTCGGCA TERM 3639 2819977 - 2819964 - g 71 -8.1 -3.90048 | opp_overlap 2819950 2819949 2819971, overlap 2819962 TGTTTCGTAAAAATA CGGAG CGTT CTCCG TCAGAATATCGTCGG CKO_03040 2819177 - 2820037 + | hypothetical protein CKO_03041 2820380 - 2820024 - | putative fructose-like phosphotransferase EIIB subunit 3 CKO_03042 2821023 - 2820382 - | pyruvate formate lyase II activase TERM 3640 2820656 - 2820619 - G 73 -10.7 -3.34344 | gap 1, opp_overlap 2820626 2820628 2820645, overlap 2820620 2820626 GTAGCCCGGAATCAA CGGCAAACG-GGGGATGA CCG TAATCCCCTCGTTTACCA GTAAACGCAGGTTAT TERM 3641 2820655 - 2820620 - G 72 -12 -2.60392 | gap 1, opp_overlap 2820626 2820628 2820645, overlap 2820619 2820626 TAGCCCGGAATCAAC GGCAAACG-GGGGATGA CCG TAATCCCCTCGTTTACC AGTAAACGCAGGTTA TERM 3642 2820783 - 2820803 + g 70 -8.9 -3.64703 | opp_overlap 2820782, overlap 2820784 GCGGTAGCAACCGAC TGGCAGGCG CGT CGCCTGCGG TTTCAATCGCGCAGG CKO_03043 2823523 - 2821226 - | putative formate acetyltransferase 2 TERM 3643 2823135 - 2823160 + g 78 -6.9 -4.59773 | overlap 2823124 2823137 TCATCGGTCATCTGG CCGTTGATGAA ATCC TTCATCGACCG TTTTTCCCAGTACGG CKO_03044 2823902 - 2823636 - | putative fructose-like phosphotransferase EIIB subunit 2 CKO_03045 2825050 - 2823971 - | putative fructose-like permease EIIC subunit 2 TERM 3644 2824996 - 2825021 + g 83 -7.5 -4.61231 | opp_overlap 2824996 GGATCATATGCGAAA CACCGGTCATC AGAT GTTGACGGGTG TTTTTCAGGATCTGC TERM 3645 2825189 - 2825179 - RH 70 -2.4 -4.93898 | ATATCAGTACAAAAA TGCG ATC CGCC TCATAACTTATCAAA CKO_03047 2825424 - 2825293 - | hypothetical protein TERM 3646 2825515 - 2825504 - gH 74 -7.2 -4.20354 | opp_overlap 2825504 AAGGCAACGCCAAAA GCGC GCTG GCGC TGATTGGCACCGACA TERM 3647 2825533 - 2825553 + GH 95 -13.3 -3.89756 | ATTGGCACCGACACG CTGGCAGGC GAC GCCTGTCAG TTATTAATTTCAGGT TERM 3648 2825721 - 2825749 + GH 87 -13.8 -3.29263 | overlap 2825744 GTTTTTTCGCGCCCG CGCCGTCTGCAC CGGCA GCGCAGGCGGCG TTCTGACGCAGCTCT TERM 3649 2827732 - 2827722 - gH 72 -8.2 -3.71378 | overlap 2827723 GACACTCAACAAACA CGCC GCA GGCG ACCAGCATATGCGCA CKO_03046 2825359 - 2827860 + | hypothetical protein CKO_03048 2827872 - 2828534 + | fructose-6-phosphate aldolase CKO_03049 2828547 - 2829650 + | glycerol dehydrogenase TERM 3650 2829694 - 2829664 - T 80 -12.7 -2.94595 | opp_overlap 2829670 2829693, overlap 2829670 AACGGTCAGGAGAGA CAAAAAGCCCGCA GATCG TGCGGGCTTTTTT TATTTGCCGGATGGC TERM 3651 2829688 - 2829670 - T 100 -11.7 -5.05601 | opp_overlap 2829670, overlap 2829664 CAGGAGAGACAAAAA GCCCGCA GATCG TGCGGGC TTTTTTTATTTGCCG TERM 3652 2829670 - 2829688 + T 100 -11.7 -5.95539 | opp_overlap 2829664 2829670 CAGGAGAGACAAAAA GCCCGCA GATCG TGCGGGC TTTTTTTATTTGCCG CKO_03050 2831929 - 2829749 - | hypothetical protein TERM 3653 2830111 - 2830135 + g 76 -10 -3.91897 | gap 1 GCGCCGTCATCTCCG GCGCGGTCAGC GTCA GCTG-CTGCGC TTTATCAATCAGCAG TERM 3654 2831274 - 2831287 + g 71 -9.5 -3.53761 | opp_overlap 2831260 AGCCCCATTTCGGTG GCGCC TAAC GGCGC TTTCGCCAGCGCTTC TERM 3655 2831581 - 2831553 - G 77 -8 -4.08767 | gap 1 TTCAGCGGTGCAAAA CGCTGCTGC-CCG CGTC CGGCGCCGCCGCG CCCGTCGACGGAACG TERM 3656 2832083 - 2832068 - R 100 -10.4 -5.25803 | opp_overlap 2832065 AATGTGCATAAAAAA GCCCTC CGAA GAGGGC TAATCATGTTACAGG CKO_03051 2832982 - 2832092 - | 5,10-methylenetetrahydrofolate reductase TERM 3657 2832789 - 2832826 + g 71 -9.9 -3.58343 | gap 1 GTGCGGTCGCGCTCA CCGGAG-TTGGCGCCGTA GGT TACGGAGACAAACTTCGG TTTCAGGCTGCTCAG CKO_03052 2834048 - 2833140 - | hypothetical protein CKO_03053 2834140 - 2834511 + | hypothetical protein CKO_03054 2837024 - 2834592 - | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 3658 2835872 - 2835839 - G 72 -11.7 -2.72344 | gap 1 CGCCAGCGCCAACCA TCGCGACCAGCGCCAG CCC CTGACGCAGG-CGCAA TTCGCCCGGCAGGCC TERM 3659 2836247 - 2836226 - G 71 -10.8 -3.28924 | opp_overlap 2836220 2836243 TACGGGCGTGCAGAA CCGGCGCG GCCAGA CGCGCCAG CTCGCTGGCTTCATC CKO_03055 2838187 - 2837027 - | cystathionine gamma-synthase TERM 3660 2837335 - 2837365 + g 76 -3.2 -5.00616 | overlap 2837337 CGGCAATCTCGTGCC CTTGATTATCCGGC AGC GACGGATGATACAG TTTTTTCACCAGCGG CKO_03056 2838293 - 2838430 + | hypothetical protein CKO_03057 2838455 - 2838772 + | transcriptional repressor protein MetJ TERM 3661 2838875 - 2838846 - f 73 -10.1 -3.42395 | opp_overlap 2838847 2838854, overlap 2838854 GCCATCAGGCAAAGA CAAAAAAAGCGCC TTTC GGCGCTTTTTTCT TTGACAGCAATAAGT TERM 3662 2838847 - 2838874 + F 82 -11.4 -3.53811 | opp_overlap 2838846 2838854, overlap 2838854 CCATCAGGCAAAGAC AAAAAAAGCGCC TTTC GGCGCTTTTTTC TTTGACAGCAATAAG TERM 3663 2838867 - 2838854 - f 100 -9.5 -5.88197 | opp_overlap 2838854 2838847, overlap 2838846 GCAAAGACAAAAAAA GCGCC TTTC GGCGC TTTTTTCTTTGACAG TERM 3664 2838854 - 2838867 + F 100 -9.5 -5.63517 | opp_overlap 2838846 2838854, overlap 2838847 GCAAAGACAAAAAAA GCGCC TTTC GGCGC TTTTTTCTTTGACAG CKO_03058 2838980 - 2839120 + | hypothetical protein TERM 3665 2840202 - 2840190 - g 74 -4.7 -4.81249 | opp_overlap 2840190 2840193, overlap 2840182 2840191 2840192 GCTGAAAGCCAAAAA CGGCG AGG CGGCG ATTGTCATCGGCACT TERM 3666 2840272 - 2840247 - g 71 -4.7 -4.57073 | gap 1, opp_overlap 2840234 TACGCCGTTTAAAAA CCTCGGCG-TCA TTG TGATCGACGAAG AGCATGACAGCTCCT TERM 3667 2841013 - 2841026 + G 70 -6.7 -4.10453 | TTCTCGGCGGATTTC CGTTC GGCG GAACG TTTTGCCCAGCTTTA CKO_03059 2839309 - 2841507 + | primosome assembly protein PriA CKO_03060 2841663 - 2842688 + | DNA-binding transcriptional regulator CytR CKO_03061 2842880 - 2843779 + | cell division protein FtsN TERM 3668 2843813 - 2843839 + F 77 -10.8 -3.31869 | overlap 2843812 2843815 2843816 CATTTATATTTGCAT TATGCCCCGTAC CGC GTGCGGGGCCTG TATTCTGCATTTGTA TERM 3669 2843815 - 2843837 + F 77 -11.2 -3.21474 | overlap 2843813 2843812 2843816 TTTATATTTGCATTA TGCCCCGTAC CGC GTGCGGGGCC TGTATTCTGCATTTG TERM 3670 2843816 - 2843836 + F 86 -14.7 -2.52161 | overlap 2843815 2843813 2843812 TTATATTTGCATTAT GCCCCGTAC CGC GTGCGGGGC CTGTATTCTGCATTT CKO_03062 2843907 - 2844401 + | ATP-dependent protease peptidase subunit CKO_03063 2844411 - 2845742 + | ATP-dependent protease ATP-binding subunit TERM 3671 2845773 - 2845790 + F 100 -11.3 -5.07486 | opp_overlap 2845785 TTTCATCACTGTTGA TGGGGCT GAAA AGCCCCA TTTTTATTGGCGCTA CKO_03064 2845809 - 2846738 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase CKO_03066 2847259 - 2846735 - | hypothetical protein CKO_03067 2847402 - 2847262 - | hypothetical protein CKO_03065 2846831 - 2847316 + | ribonuclease activity regulator protein RraA TERM 3672 2847318 - 2847347 + gTr 81 -12.3 -3.17723 | opp_overlap 2847325, overlap 2847325 TTGATATCGAGTGAT CAAAAAAGGCACC GTAA GGTGCCTTTTTTA TTGCGTTGCCGCTCA TERM 3673 2847340 - 2847325 - GTR 100 -10.4 -5.1675 | opp_overlap 2847325 2847318 CGAGTGATCAAAAAA GGCACC GTAA GGTGCC TTTTTTATTGCGTTG TERM 3674 2847325 - 2847340 + gTr 100 -10.4 -5.5074 | opp_overlap 2847325, overlap 2847318 CGAGTGATCAAAAAA GGCACC GTAA GGTGCC TTTTTTATTGCGTTG CKO_03068 2847472 - 2847317 - | hypothetical protein CKO_03069 2847727 - 2847482 - | hypothetical protein TERM 3675 2847601 - 2847617 + g 74 -6.5 -4.35474 | overlap 2847604 GCTGAGCAGACTGTA CATCCTG CGC CAGGCTG TTGTTCTTTTCTTTC TERM 3676 2847961 - 2847946 - R 73 -7.5 -4.07568 | opp_overlap 2847957 TGGTTTGTCGTAAAA CGCGC TTCATG GCGCG ATAACGCTCATTTTA CKO_03070 2848094 - 2847969 - | hypothetical protein CKO_03071 2848118 - 2848963 + | hypothetical protein TERM 3677 2849832 - 2849845 + G 77 -8.1 -4.08216 | CGAGAAAGCGGTTAA GTCCG AAAA CGGAC TTTTGACCACCATCG TERM 3678 2850467 - 2850454 - g 76 -3.1 -5.00884 | gap 1, overlap 2850463 AGCGGCTGGAAAAAA GCG-GT CAA ACGCGC CCTGGCGTGGGAAGA CKO_03072 2848987 - 2850495 + | glycerol kinase TERM 3679 2850596 - 2850564 - T 100 -16.5 -2.83012 | opp_overlap 2850570, overlap 2850566 2850570 AATTTGATTACCATA GAGTAATACCACTCC AAA AGAGCGGTATTACTC GAATGTAAGACATGG TERM 3680 2850594 - 2850566 - T 82 -13.3 -2.96216 | opp_overlap 2850570, overlap 2850564 2850570 TTTGATTACCATAGA GTAATACCACTCC AAA AGAGCGGTATTAC TCGAATGTAAGACAT CKO_03073 2851032 - 2850613 - | hypothetical protein CKO_03074 2851340 - 2851032 - | hypothetical protein TERM 3681 2851591 - 2851570 - g 78 -5.8 -4.83169 | opp_overlap 2851580 2851581, overlap 2851573 ACGCGGCGACAAAAA TACCGCTG ACGGCG CGGCGGTA AACGCCATGCGTATT TERM 3682 2851988 - 2851973 - g 74 -10.4 -3.5393 | opp_overlap 2851973 ACGATTCTGGCCAAA CCGCGT CATG ACGCGG TGATTGCAGAGATGC CKO_03075 2851481 - 2852491 + | fructose 1,6-bisphosphatase II TERM 3683 2852509 - 2852536 + F 71 -7.6 -3.90112 | opp_overlap 2852535, overlap 2852511 2852512 GATTTGTTCGATTGA GCCTTCCGGCCC TTCG GGGCTGGAAATC TTTCGTTCAACGAAC TERM 3684 2852511 - 2852534 + F 72 -8.8 -3.54146 | overlap 2852509 2852512 TTTGTTCGATTGAGC CTTCCGGCCC TTCG GGGCTGGAAA TCTTTCGTTCAACGA TERM 3685 2852512 - 2852533 + F 78 -12.3 -2.72166 | overlap 2852511 2852509 TTGTTCGATTGAGCC TTCCGGCCC TTCG GGGCTGGAA ATCTTTCGTTCAACG TERM 3686 2853262 - 2853228 - g 77 -11.4 -3.53224 | GATGCTGTGCGGAAA TCCGCAGATGGTGCGT GAT ACGCAACAGCTGCTGA AGGAGACCCGGCACA CKO_03076 2852587 - 2853333 + | ferredoxin-NADP reductase CKO_03077 2853855 - 2853409 - | hypothetical protein TERM 3687 2853663 - 2853628 - G 71 -8.2 -3.78793 | gap 1 CAGAATCATCAATAA CGCCCACA-GGCCGGAG CGC CCCCGGTCATGCAGACG CTTAACCGTGACCGC TERM 3688 2853963 - 2853976 + G 81 -2.3 -5.40014 | TAAGATTGATGAAGC CAGGG TGTA CACTG TTTTTATTATTGTTT TERM 3689 2854363 - 2854333 - g 71 -10.3 -3.16288 | opp_overlap 2854333 2854332, overlap 2854331 CAAAGCGCAGGAATA CATGGCGGCGGTG ATCCG CACCGTCGCCCCG CTTCTGACAAAAGAG CKO_03078 2853956 - 2854552 + | hypothetical protein CKO_03079 2854685 - 2855434 + | triosephosphate isomerase TERM 3690 2855485 - 2855511 + T 100 -10.1 -5.40072 | gap 1, opp_overlap 2855484 2855482 2855480 CACACAAAATCACAG GCCCGGTAAGCG TTAA CGCC-ACCGGGC TTTTTTTACAAACGC CKO_03080 2856821 - 2855517 - | hypothetical protein TERM 3691 2856549 - 2856592 + g 86 -10.3 -4.11216 | gap 1, opp_overlap 2856564 2856565, overlap 2856551 CGGCCATGAGTCGGT CA-GTCTGGCGGATAAGGCG CGCGC CGCCCTGTCTGCCAGCCCTG TTTTGCGAATCGCCA TERM 3692 2856551 - 2856589 + g 76 -13.1 -2.79004 | opp_overlap 2856564 2856565, overlap 2856549 GCCATGAGTCGGTCA GTCTGGCGGATAAGGCG CGCGC CGCCCTGTCTGCCAGCC CTGTTTTGCGAATCG TERM 3693 2856811 - 2856833 + g 70 -2.7 -4.79949 | gap 1, overlap 2856817 AGAGGGTGTGTAAGC CAGAGCGACA TGCC TGTCTC-CTG TTGTTTTTTTCAACA CKO_03081 2857644 - 2856895 - | CDP-diacylglycerol pyrophosphatase TERM 3694 2857463 - 2857473 + gr 72 -8.2 -3.75153 | opp_overlap 2857462 TTAAACACGACATAC CCGG CAT CCGG TTTCACTTCAGCGCA TERM 3695 2857480 - 2857498 + gr 75 -6.6 -4.43012 | overlap 2857482 2857493 GGCATCCGGTTTCAC TTCAGCGC ATG GCGCAGGA TTTTGCTGTTGCAGT CKO_03082 2857741 - 2857562 - | hypothetical protein TERM 3696 2857730 - 2857706 - GR 100 -15.7 -5.73978 | ATGACAAATAAAAAA GCCCGGTCGCA CGA TGCCACCGGGC TGGAAAAGCAATTTA CKO_03083 2858737 - 2857748 - | sulfate transporter subunit CKO_03084 2858941 - 2858798 - | hypothetical protein CKO_03085 2859907 - 2858945 - | 6-phosphofructokinase TERM 3697 2859246 - 2859262 + g 78 -2.1 -5.22039 | overlap 2859248 CACATATGTTCGGTG ATCGCGA CAA TCGCGTG TTTTTTACCTTTCGC TERM 3698 2859248 - 2859260 + g 84 -9.1 -4.23298 | overlap 2859246 CATATGTTCGGTGAT CGCGA CAA TCGCG TGTTTTTTACCTTTC TERM 3699 2859619 - 2859631 + g 79 -3.3 -5.15117 | opp_overlap 2859614 2859590 CGATAACAACCAGCG CGTCG ATG CCACG TTTTTTCAGGTTTTC CKO_03086 2861000 - 2860098 - | ferrous iron efflux protein F TERM 3700 2860955 - 2860931 - G 71 -5.7 -4.27192 | overlap 2860935 AAATTTTGATCAAAA GTAACAGTGAC GCC ATCACTGTCGC GGCAATTGCCGCCCG TERM 3701 2861108 - 2861090 - R 100 -14.6 -5.93809 | TTTGGACAAAAAAAA CCCCTCCA TCA TGGAGGGG AAGACAGGGATGGTG CKO_03087 2861649 - 2861149 - | periplasmic repressor CpxP CKO_03088 2861800 - 2862498 + | DNA-binding transcriptional regulator CpxR CKO_03089 2862495 - 2863868 + | two-component sensor protein CKO_03090 2864639 - 2863968 - | hypothetical protein TERM 3702 2864176 - 2864163 - G 70 -9.5 -3.45118 | CGACGCCAGAATTAA CGGCG CATC CGCCG ATACCTGCCCCGGCG CKO_03091 2864844 - 2865683 + | hypothetical protein TERM 3703 2865690 - 2865734 + T 70 -4.8 -4.42806 | gap 1, opp_overlap 2865714 GGCCGTTAATTCTGA CCGGAAGCGCCGGATGA-GGC ATAA GCCGTCATCCGGCAAAACGGG TTTATTTCACCGTAC CKO_03092 2866719 - 2865736 - | 2-keto-3-deoxygluconate permease TERM 3704 2866930 - 2866964 + r 78 -12 -3.05816 | opp_overlap 2866934, overlap 2866934 CAAAAGCGCCTAAAA GAAAGCCCCCGCAGGT TAT GCCTGCGGGGGCTGAA TTCAATGCCGGATGG TERM 3705 2866960 - 2866934 - R 100 -20.9 -4.65263 | opp_overlap 2866930 2866934 AGCGCCTAAAAGAAA GCCCCCGCAGG TTATG CCTGCGGGGGC TGAATTCAATGCCGG TERM 3706 2866934 - 2866960 + r 100 -21.6 -2.54896 | opp_overlap 2866934, overlap 2866930 AGCGCCTAAAAGAAA GCCCCCGCAGGT TAT GCCTGCGGGGGC TGAATTCAATGCCGG CKO_03093 2867741 - 2867109 - | superoxide dismutase TERM 3707 2867438 - 2867456 + g 80 -4.4 -5.03747 | overlap 2867439 2867454 TAGCCGCTTTCAGGT CGCCCTGC AAA GCAGTGCC TTTTTTCAGGCCTTT CKO_03094 2868018 - 2869052 + | rhamnose-proton symporter TERM 3708 2869065 - 2869098 + T 79 -10.3 -3.55444 | TAATCGTTTTGCGTA CTGTGATGACGCC ACTGGCTG GGCGTCATCCCGG TTTCCCGCGTAAACA CKO_03095 2869531 - 2869049 - | hypothetical protein CKO_03096 2869553 - 2869885 + | hypothetical protein CKO_03098 2870018 - 2869851 - | hypothetical protein CKO_03097 2869920 - 2870039 + | hypothetical protein CKO_03099 2870887 - 2870051 - | transcriptional activator RhaS CKO_03101 2871316 - 2871080 - | hypothetical protein TERM 3709 2871143 - 2871124 - GH 81 -12.2 -3.15579 | opp_overlap 2871121, overlap 2871113 TTAACCTGTCAGTAA CAGGAAGG TACG CCTTCCTG GGGGTTCTTAGACTG TERM 3710 2871339 - 2871321 - gH 77 -3.8 -5.00884 | ACTGTTTGCAAAAAA CAGACG GGTTCGA CGCCTG GGATATCGACAGCCT CKO_03100 2871242 - 2872657 + | rhamnulokinase TERM 3711 2872883 - 2872858 - g 100 -16.1 -3.54919 | AACTATCCCGGTAAA GCGCGCAGCGC CAGC GAGCTGCGCGC CGACCTGGAACAGGC TERM 3712 2873706 - 2873695 - g 100 -7.2 -5.27779 | overlap 2873696 CGCAATATGAAAAAA GCGC TGCT GCGC GCGCTGCTGGAACCA CKO_03102 2872654 - 2873913 + | L-rhamnose isomerase TERM 3713 2873949 - 2874000 + F 90 -13.8 -3.30243 | opp_overlap 2873943 2873946 2873977 2873979, overlap 2873950 GCCGGATAAGACGTT CCGCGTCGCCATCCGGCAAT AAATGAAACACG ATTGCCGGATGGCGCTGCGC TTATCCGGCCTACGT TERM 3714 2873950 - 2873999 + F 100 -17.3 -2.57931 | opp_overlap 2873943 2873946 2873977 2873979, overlap 2873949 CCGGATAAGACGTTC CGCGTCGCCATCCGGCAAT AAATGAAACACG ATTGCCGGATGGCGCTGCG CTTATCCGGCCTACG CKO_03103 2874057 - 2874884 + | rhamnulose-1-phosphate aldolase CKO_03105 2875028 - 2874870 - | hypothetical protein TERM 3715 2875050 - 2875034 - gH 70 -10.1 -3.08508 | overlap 2875031 CACTTCCCAAAATTA GCCTGCA TGG CGCAGGC GCAATCGGCGATATG TERM 3716 2875431 - 2875383 - gH 86 -7.9 -4.81249 | overlap 2875410 2875412 CGGCAAAGTCAAAAA CGCGGGCGTTCCGCTGGTGGC GATTAAT ACCACCGCCGGTACGGCAGCG GAAATGACCAGCAAT TERM 3717 2875434 - 2875410 - gH 71 -9.9 -3.14132 | overlap 2875383 2875412 GCTGGTGGCGATTAA TACCACCGCCG GTA CGGCAGCGGAA ATGACCAGCAATGCC TERM 3718 2875432 - 2875412 - gH 81 -12.5 -3.13403 | overlap 2875383 2875410 TGGTGGCGATTAATA CCACCGCCG GTA CGGCAGCGG AAATGACCAGCAATG TERM 3719 2875884 - 2875895 + GH 74 -7.2 -4.08767 | overlap 2875877 CTTTAACCGCCCGAA CGCG GTCG CGCG TTTTGCCCACGTCGC CKO_03104 2875003 - 2876151 + | hypothetical protein CKO_03106 2876148 - 2876462 + | hypothetical protein CKO_03107 2877149 - 2876601 - | hypothetical protein TERM 3720 2877172 - 2877188 + H 73 -10.9 -2.62389 | opp_overlap 2877177, overlap 2877171 TCCACGTTCTTTATA TCGAACG AAT CGTTCGA CTTGTAAATCAATTC TERM 3721 2877441 - 2877480 + G 82 -11.2 -3.79747 | opp_overlap 2877461, overlap 2877442 TGTTTATCGGCATTG TCGCCAGCGGCGGGAACC CACT GGCCGCCGCCGCTGCCGG TTTGCTGGTGAATGC TERM 3722 2877442 - 2877479 + G 79 -12.5 -2.87527 | opp_overlap 2877461, overlap 2877441 GTTTATCGGCATTGT CGCCAGCGGCGGGAACC CACT GGCCGCCGCCGCTGCCG GTTTGCTGGTGAATG TERM 3723 2877643 - 2877662 + G 82 -5.6 -5.02074 | opp_overlap 2877622 2877614, overlap 2877644 AGCCGCCTACTGGCT GTGCGGCG CGGG CGTCGCAA TTTTTTGGCCGCTGG CKO_03108 2877251 - 2877910 + | hypothetical protein CKO_03109 2877910 - 2878233 + | hypothetical protein TERM 3724 2878306 - 2878277 - T 83 -10.1 -4.03204 | gap 1, opp_overlap 2878283 2878285, overlap 2878285 CAGTAAACGCAGAAA CGAAAAAAGCGCCC TGA AGGCGC-TCTTTCG ACAGTTTTGAATCAC TERM 3725 2878299 - 2878285 - T 100 -9.2 -5.42514 | opp_overlap 2878283 2878285, overlap 2878277 GCAGAAACGAAAAAA GCGCCC TGA AGGCGC TCTTTCGACAGTTTT CKO_03110 2878534 - 2878322 - | hypothetical protein CKO_03111 2879394 - 2878663 - | formate dehydrogenase accessory protein TERM 3726 2879161 - 2879133 - G 77 -11.6 -3.55444 | opp_overlap 2879140 GCTCCACGCCGCAAA CGCCGCAGCCGG TACGC CCGGCCAGGGCG CGACGACGTTCTTTC TERM 3727 2879614 - 2879595 - R 95 -12.8 -4.13767 | overlap 2879606 TTTGTGAGGTCAAAA CCGGGGCA AAAC CGCCCCGG TCGGCAGGATGAGAA CKO_03112 2880243 - 2879632 - | hypothetical protein TERM 3728 2879954 - 2879929 - G 84 -8.9 -4.36914 | GCCGTTGTCAGAAAA CCGCCAGGC CTGCCCCT GCCGGGCGG GGCCATCCACAAAGA CKO_03113 2882659 - 2880308 - | hypothetical protein CKO_03114 2883379 - 2882696 - | hypothetical protein TERM 3729 2883011 - 2883028 + g 74 -2.7 -4.96501 | overlap 2883013 GACGGGAAGGTTTTG GCTAAAG ACCA CTTTAAC TTTGTTTTTATCCCG TERM 3730 2883221 - 2883271 + g 71 -8.2 -3.83844 | opp_overlap 2883221 GATTTTGGTATACAA GAGCTGGGCATCAGCATCGGTGTT TTT AACATCCATACTGCCGCCTTGCTC TTCTTCATTAATCAG TERM 3731 2883432 - 2883405 - R 85 -12.8 -3.43217 | overlap 2883406 CATTAATATTCATAA CTGCTCCCCATA GTAA TATGGGGAGCAT CTACGATACGTGCAG TERM 3732 2883431 - 2883406 - R 90 -16.3 -2.65448 | overlap 2883405 ATTAATATTCATAAC TGCTCCCCATA GTAA TATGGGGAGCA TCTACGATACGTGCA CKO_03115 2884160 - 2883453 - | hypothetical protein TERM 3733 2884596 - 2884611 + H 75 -6.2 -4.43012 | opp_overlap 2884596 GTTATTATGCATCAA TGTGAT AAGC ATCACA TTTTCATGTTGCCAT CKO_03116 2884804 - 2885391 + | hypothetical protein TERM 3734 2885830 - 2885810 - g 70 -5.4 -4.51097 | GCAAGTACGACAAAA CCAGTTGG GCCTA CGAACTGG ATGAAAATGGCTTCG TERM 3735 2887003 - 2887018 + G 80 -9 -4.09864 | GACGATGGCACCACC TCCAGC GGAT GCTGGA TTTTCGCCGGTAGCT CKO_03117 2885440 - 2887854 + | hypothetical protein CKO_03118 2887867 - 2888769 + | hypothetical protein CKO_03119 2888766 - 2889401 + | formate dehydrogenase-O subunit gamma TERM 3736 2889450 - 2889469 + G 83 -10.7 -3.9461 | opp_overlap 2889450 2889447 AGAGCGAGAAACGTA CGGCGGA TATGAT TCCGCCG TTATTGTTCCCCCGG CKO_03120 2889398 - 2890327 + | formate dehydrogenase accessory protein FdhE TERM 3737 2890340 - 2890363 + T 77 -10.2 -3.37796 | TAATTCTGACGTCAG GTCGGGTGGT GCGT GCCGCCCGGC TTATAAATGGTAAGG CKO_03121 2890738 - 2890364 - | hypothetical protein CKO_03122 2890986 - 2890738 - | hypothetical protein TERM 3738 2891218 - 2891187 - g 70 -8.8 -3.76174 | opp_overlap 2891189 2891196, overlap 2891185 2891192 2891196 AAAGGGAGCAAAATA TCGAATAAAGGAGG ATTA CCCCCTTTATCCTA CTCTTCCTCGTTGCC TERM 3739 2891209 - 2891196 - g 71 -5.9 -4.27911 | opp_overlap 2891196 2891189, overlap 2891192 2891187 2891185 AAAATATCGAATAAA GGAGG ATTA CCCCC TTTATCCTACTCTTC CKO_03123 2891037 - 2891246 + | hypothetical protein CKO_03124 2892205 - 2891216 - | hypothetical protein CKO_03125 2892639 - 2892202 - | D-tyrosyl-tRNA deacylase CKO_03126 2893508 - 2892636 - | ribonuclease BN TERM 3740 2892775 - 2892761 - G 74 -2.1 -5.05113 | gap 1 CCCAGACAAACAAAA TGG-GG ATAA CCGCCA GCACGCCGTAAATCA TERM 3741 2892911 - 2892868 - G 71 -5.9 -4.37092 | gap 1, opp_overlap 2892878, overlap 2892854 2892870 ACCGCTGCGACAAAA GCGCCGACAACG-GCATCGC GGTTT GGTACGCGCGTGGTCGGCAC AATGCTGTACAGCAG CKO_03127 2894218 - 2893502 - | phosphatase TERM 3742 2893627 - 2893616 - G 74 -2.2 -5.00616 | gap 1 GTTGTCGTCAAAAAA GACCG TAT CGG-C GGCAGAAAAACCTTC TERM 3743 2894197 - 2894229 + g 71 -4.7 -4.58395 | opp_overlap 2894204, overlap 2894199 CGACTAACGCAAACG GAAAAAAGGCGATGC AAT GCATCGCCTTAACAC TTTTTGCCGGATGGC TERM 3744 2894222 - 2894204 - G 100 -14.6 -5.22039 | opp_overlap 2894199 2894197 CGCAAACGGAAAAAA GGCGATGC AAT GCATCGCC TTAACACTTTTTGCC CKO_03128 2897190 - 2894464 - | hypothetical protein TERM 3745 2895572 - 2895610 + g 75 -5.9 -4.54821 | gap 1, overlap 2895561 2895573 GGGTCCACCGGGTCA ACCGGTCCCGG-CGGT GTTGGTGG ATCGACCGGGTCCGGG TTTTCTGGTTCCGGT TERM 3746 2895677 - 2895691 + g 71 -4.2 -4.57569 | opp_overlap 2895679, overlap 2895668 2895679 AGCTGGCTGGTGAGA TACCAG TTG CTGGCA TTTTTCACCACGTCA TERM 3747 2897149 - 2897162 + g 84 -5.9 -5.08824 | opp_overlap 2897135, overlap 2897150 ACAGAGCGCGAGCTT TGCCG GGAT CGGCG TTTTTTGAATAAGAC TERM 3748 2897244 - 2897232 - R 72 -5.5 -4.38712 | TTTATTCGGATAAAA GCATC AAA GACGC GTGCATAAGATATTT TERM 3749 2897589 - 2897614 + r 84 -10.5 -3.87869 | opp_overlap 2897591, overlap 2897591 2897594 AGCAAAAAGGTGAAA AAGAACCGTCT AAAA AGACGGTTCTG TTTATAACCCCTTCA TERM 3750 2897591 - 2897612 + r 90 -13.1 -3.52678 | opp_overlap 2897591, overlap 2897589 2897594 CAAAAAGGTGAAAAA GAACCGTCT AAAA AGACGGTTC TGTTTATAACCCCTT TERM 3751 2897612 - 2897591 - R 100 -13.1 -4.7657 | opp_overlap 2897589 2897591 2897594 CAAAAAGGTGAAAAA GAACCGTCT AAAA AGACGGTTC TGTTTATAACCCCTT TERM 3752 2897594 - 2897609 + r 77 -9 -3.89695 | opp_overlap 2897591, overlap 2897591 2897589 AAAGGTGAAAAAGAA CCGTCT AAAA AGACGG TTCTGTTTATAACCC CKO_03129 2898430 - 2897627 - | hypothetical protein TERM 3753 2898159 - 2898178 + g 100 -9.2 -5.48063 | TCTGGAATATAGTCC GCCACCGC TTCC GCGATGGC TTTTTTCTCTTCCGT CKO_03130 2899365 - 2898463 - | hypothetical protein TERM 3754 2898646 - 2898627 - G 71 -4.2 -4.59773 | gap 1, overlap 2898630 GCGCACCGTGAAAAA CATCCCCCG CGC CGGTGG-TG TCGACCACCTCTACC CKO_03131 2899499 - 2900422 + | hypothetical protein CKO_03132 2900445 - 2901323 + | hypothetical protein CKO_03133 2901339 - 2902580 + | hypothetical protein CKO_03134 2902691 - 2904319 + | hypothetical protein CKO_03135 2904359 - 2904715 + | hypothetical protein TERM 3755 2904840 - 2904869 + G 73 -5.2 -4.57304 | gap 2, overlap 2904840 2904839 2904847 GGATGGGTGATTTAG GC-T-CCAATATCC TGCT GGATATTGGTACGC TTTATTTACTTAAGT TERM 3756 2905456 - 2905442 - g 70 -3.4 -4.68424 | opp_overlap 2905442 2905446, overlap 2905434 GAAGCGACCGAAAAA CCGGGG CTG CTCCAG TCGTTTCGCGCCATT CKO_03136 2904761 - 2906143 + | hypothetical protein TERM 3757 2906159 - 2906172 + F 75 -9.5 -3.61517 | opp_overlap 2906159 2906158 2906157 CAATGATAATAAAGG CGCCC TTCG GGGCG TTATTGAGGAGCGAT TERM 3758 2906251 - 2906237 - g 71 -4.2 -4.62336 | opp_overlap 2906241, overlap 2906239 AGCCTACGGGAAAAA TATGCC TAT GGCATG GGTGACTTCGGCTCA TERM 3759 2906475 - 2906500 + G 100 -15.5 -3.85817 | gap 1 TGTATGCATCATTTC CTGTCGCGCTGG TTG CCAGCGCG-CAG TTTCTCGCCACCGAT CKO_03137 2906189 - 2907583 + | hypothetical protein CKO_03138 2907633 - 2908364 + | outer membrane porin L TERM 3760 2908398 - 2908381 - T 100 -12.7 -5.58179 | opp_overlap 2908381 CAGGATAATAAAAAA GCCGCTG AAAT CAGCGGC TTTTTGTTGCCGGAT TERM 3761 2908381 - 2908398 + T 100 -12.7 -5.06816 | opp_overlap 2908381 CAGGATAATAAAAAA GCCGCTG AAAT CAGCGGC TTTTTGTTGCCGGAT CKO_03139 2910299 - 2908476 - | GTP-binding protein TERM 3762 2909572 - 2909590 + g 71 -8.2 -3.84514 | TTACGGGTTTTGCCT TCGCTATC GAT GATAGTGA TTTGCTGGTTCGGCT TERM 3763 2910452 - 2910466 + rH 73 -10 -3.37959 | opp_overlap 2910459 2910461, overlap 2910459 2910461 2910463 CACTCACTGTCCATT GCACCA ACA TGGTGC TTAATGTTCACATTA CKO_03141 2912215 - 2910671 - | hypothetical protein TERM 3764 2911464 - 2911454 - Gg 70 -6.8 -4.13945 | ACCTTTATGCCAAAA CCGA TGT TCGG CGATAACGGTTCCGG CKO_03140 2910653 - 2912086 + | glutamine synthetase CKO_03142 2912331 - 2912191 - | hypothetical protein TERM 3765 2912253 - 2912270 + g 100 -11.3 -5.24129 | TGCCACTCATCTGTA GCCCATC ACAC GATGGGC TTTTTTCTCCACCAA CKO_03143 2912366 - 2913415 + | nitrogen regulation protein NR(II) CKO_03144 2913427 - 2914836 + | nitrogen regulation protein NR(I) TERM 3766 2915009 - 2915023 + T 73 -11.4 -2.69151 | opp_overlap 2915009, overlap 2915006 2915018 GCCACACGCCACAAA CTGCGG TTG CCGCAG TACTGTGTGCAGCGC TERM 3767 2915023 - 2915009 - T 87 -11.4 -3.91144 | opp_overlap 2915006 2915009 2915018 GCCACACGCCACAAA CTGCGG TTG CCGCAG TACTGTGTGCAGCGC CKO_03145 2916522 - 2915149 - | coproporphyrinogen III oxidase TERM 3768 2916549 - 2916567 + r 72 -8.8 -3.54424 | CCGATGGCGTCGCTG GCGGGTAC GGC GTACCGGC TTTACCCCACTACGG TERM 3769 2916627 - 2916591 - R 79 -9.4 -4.1711 | gap 1, opp_overlap 2916586 2916591 2916594, overlap 2916592 ACTACGGGTAATAAA CCGGTTG-CGCAGCCAC TTCT GTCGCCGCGACAACCGC TGTAGTTTAACGAAT TERM 3770 2916626 - 2916592 - R 82 -12.9 -3.09784 | gap 1, opp_overlap 2916591 2916586 2916594, overlap 2916591 CTACGGGTAATAAAC CGGTTG-CGCAGCCAC TTCT GTCGCCGCGACAACCG CTGTAGTTTAACGAA CKO_03146 2917220 - 2916711 - | hypothetical protein TERM 3771 2917378 - 2917357 - H 100 -14.5 -5.72622 | opp_overlap 2917357 CCTATAAAGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTGCTGTCTAA TERM 3772 2917357 - 2917378 + H 100 -14.5 -5.24989 | opp_overlap 2917357 CCTATAAAGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTGCTGTCTAA CKO_03147 2917589 - 2917774 + | hypothetical protein CKO_03149 2917901 - 2918497 + | hypothetical protein TERM 3773 2918774 - 2918749 - T 100 -19.1 -5.83211 | opp_overlap 2918742 GAGCAAAATAAAAAA CGCCCCAGTCA TTAC TGACTGGGGCG GCTAAAATATTCAGC CKO_03151 2921786 - 2919000 - | DNA polymerase I TERM 3774 2919073 - 2919088 + g 71 -7.6 -3.94812 | ATACGCGTGCAGTTT TCCATC AGTT GATGGA TCTTTTTCGATACCA TERM 3775 2920706 - 2920743 + g 75 -6.3 -4.61231 | gap 1, overlap 2920691 CCGCATGGTTATCCA GGCTGTCCGTTTCGGTAT CAA ATGCAAAAACGGGC-GCC TTTTTCAGCGTCTCA TERM 3776 2921052 - 2921066 + g 71 -5.7 -4.35483 | opp_overlap 2921052 2921050 AGCCAGTTGATAAGA GAGGT AAGCC ACCTC TTTATTCTGCTCAAG TERM 3777 2921158 - 2921188 + g 76 -3.1 -5.00616 | opp_overlap 2921177 TACAGGGTATCCAGC CCGCCTAACCCCT GAAGG AGCGCCTGGGCGG TTTTTTCACCCACGC CKO_03152 2921794 - 2921949 + | hypothetical protein TERM 3778 2922220 - 2922240 + G 100 -6.9 -5.60689 | overlap 2922223 TGTTGCTGAGTATCG TATTGACCA TTT TGGTCACTA TTTTTTGTTCTGTGC CKO_03153 2922150 - 2923085 + | hypothetical protein TERM 3779 2923097 - 2923067 - T 100 -17 -4.25074 | opp_overlap 2923072, overlap 2923072 GATTAAAGCGGAAAA CAAAATCGCCGGTC AAT GACCGGCGATTTTT TTATTTCTTTTCAAC TERM 3780 2923072 - 2923092 + T 100 -16.9 -6.11392 | opp_overlap 2923067 2923072 AAGCGGAAAACAAAA TCGCCGGTC AAT GACCGGCGA TTTTTTTATTTCTTT TERM 3781 2923092 - 2923072 - T 100 -16.9 -5.10163 | opp_overlap 2923072, overlap 2923067 AAGCGGAAAACAAAA TCGCCGGTC AAT GACCGGCGA TTTTTTTATTTCTTT CKO_03154 2923721 - 2923098 - | periplasmic protein disulfide isomerase I TERM 3782 2923503 - 2923518 + g 80 -4.6 -5.10208 | overlap 2923505 GTATTTGGTCATTTT GGTGCC TTCA GGCAGC TTTTTCTTCACGTTA CKO_03155 2924734 - 2923748 - | serine/threonine protein kinase CKO_03156 2925080 - 2924811 - | hypothetical protein CKO_03157 2925149 - 2925733 + | molybdopterin-guanine dinucleotide biosynthesis protein A CKO_03159 2926299 - 2926174 - | hypothetical protein CKO_03158 2925730 - 2926233 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 3783 2926337 - 2926304 - TR 86 -14.7 -2.50816 | opp_overlap 2926304 2926309 2926311, overlap 2926311 CCCGGACGCATGAAC GCAAAAAGGCCATCC CTCA GGATGGCCTCTTCAC TTAATTAATGCCTGG TERM 3784 2926309 - 2926332 + Tr 77 -11 -3.24613 | opp_overlap 2926304 2926311, overlap 2926304 2926311 ACGCATGAACGCAAA AAGGCCATCC CTCA GGATGGCCTC TTCACTTAATTAATG TERM 3785 2926330 - 2926311 - TR 100 -13.6 -4.7629 | opp_overlap 2926309 2926304 2926311, overlap 2926304 GCATGAACGCAAAAA GGCCATCC CTCA GGATGGCC TCTTCACTTAATTAA TERM 3786 2926311 - 2926330 + Tr 86 -13.6 -3.18134 | opp_overlap 2926311 2926304, overlap 2926309 2926304 GCATGAACGCAAAAA GGCCATCC CTCA GGATGGCC TCTTCACTTAATTAA TERM 3787 2928967 - 2928979 + Tr 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3788 2929574 - 2929617 + Tr 72 -9 -3.48924 | opp_overlap 2929574 2929579, overlap 2929579 CAGATTTTTAAAGAG CAAAACTTCGCAGTGAACCT TTTC AGGTACACTCTGAAGTTTTC TTATATGAGCAGTAA TERM 3789 2929612 - 2929579 - TR 75 -6.7 -4.49756 | opp_overlap 2929574 2929579, overlap 2929574 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTTC AGGTACACTCTGAAG TTTTCTTATATGAGC TERM 3790 2929579 - 2929612 + Tr 93 -8.9 -4.84311 | opp_overlap 2929579 2929574, overlap 2929574 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTTC AGGTACACTCTGAAG TTTTCTTATATGAGC TERM 3791 2931691 - 2931703 + Tr 71 -7.7 -4.00532 | CTCTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 3792 2931723 - 2931737 + Tr 100 -8.6 -5.22289 | opp_overlap 2931723 CTCTTTCAGAGTCAA TCCTGA ATT TCAGGA TTTTTCTCTTTAATC CKO_03165 2932447 - 2931881 - | D,D-heptose 1,7-bisphosphate phosphatase TERM 3793 2932545 - 2932562 + H 74 -5.6 -4.64334 | ATTGATTTAGACGTC TGGATG CCTTAA CATCCA TTTTGTTGACGGCTT CKO_03166 2932637 - 2933668 + | DL-methionine transporter ATP-binding subunit TERM 3794 2933954 - 2933966 + G 80 -10.5 -3.86015 | TGTGCCGTTAACCGT CGGCG CCG CGCCG TTTATCGCCCGCATG CKO_03167 2933661 - 2934314 + | DL-methionine transporter permease subunit TERM 3795 2934727 - 2934715 - g 89 -2.7 -5.44119 | GTTATTCCAAAAAAA TCAAA TCA CTTGA TGAGCTACAGGATGG CKO_03168 2934354 - 2935169 + | DL-methionine transporter substrate-binding subunit TERM 3796 2935204 - 2935227 + F 88 -14.6 -3.01125 | opp_overlap 2935202, overlap 2935202 2935207 ATCTGTAATATCATT CAGGACGGGC GCTT GCCCGTCTTG TCATTTATGCAAGCT TERM 3797 2935207 - 2935224 + F 88 -12.7 -3.64915 | opp_overlap 2935202, overlap 2935204 2935202 TGTAATATCATTCAG GACGGGC GCTT GCCCGTC TTGTCATTTATGCAA CKO_03169 2935288 - 2935692 + | outer membrane lipoprotein CKO_03170 2935880 - 2935647 - | hypothetical protein TERM 3798 2935792 - 2935780 - G 71 -4.7 -4.56597 | overlap 2935781 CTGGTCTGGTAAAAA GCGCC GAC GGCGA ACTGCATCTTGTTGC CKO_03171 2935944 - 2936396 + | hypothetical protein TERM 3799 2936459 - 2936477 + F 75 -11 -3.09635 | overlap 2936461 TCACTTTTTTTGTGT CAGGCTCG CGT TGAGCCTG TTCGATCGTCCAACT TERM 3800 2937653 - 2937628 - g 72 -11.1 -3.14564 | CTACTTCGGCATCAA CTGGGATCGCG ATGT CGCGACGCCAG AAGTCGCCGATATCC CKO_03172 2936507 - 2938225 + | prolyl-tRNA synthetase TERM 3801 2938258 - 2938227 - T 93 -12.4 -3.73107 | opp_overlap 2938235, overlap 2938235 CCATCAAAGGCTAAA CAAAAAAACCCCGC TGAT GCGGGGTTTTTTAA TGTCCAGACGGGGTC TERM 3802 2938235 - 2938250 + T 100 -11.8 -5.21709 | opp_overlap 2938235 2938227 GGCTAAACAAAAAAA CCCCGC TGAT GCGGGG TTTTTTAATGTCCAG TERM 3803 2938250 - 2938235 - T 100 -11.8 -5.95539 | opp_overlap 2938235, overlap 2938227 GGCTAAACAAAAAAA CCCCGC TGAT GCGGGG TTTTTTAATGTCCAG CKO_03173 2938988 - 2938284 - | lipoprotein involved with copper homeostasis and adhesion TERM 3804 2939040 - 2939066 + r 80 -5.8 -4.91712 | opp_overlap 2939040 2939039 CTGAGGACGACGAAC TCTACCGCGAAG CGC CTTCACTGTGGA TTTTTGTGCCTTCGA CKO_03174 2939441 - 2939019 - | hypothetical protein TERM 3805 2939106 - 2939131 + g 76 -3.1 -5.0538 | gap 1, overlap 2939113 GCGTTCTTTCGACGC GCGCGTAGGGCG GGT TGCCCGTCG-GC TTTTTTGCACTGCGG CKO_03175 2939983 - 2939438 - | hypothetical protein TERM 3806 2939688 - 2939701 + g 81 -8.1 -4.24342 | AGCGCAACCTCCGCA GCCTG GGTA CAGGC TTTCTTAATGCGGCG CKO_03176 2940183 - 2940383 + | hypothetical protein CKO_03177 2940376 - 2940630 + | Rho-binding antiterminator CKO_03178 2942036 - 2940714 - | tRNA(Ile)-lysidine synthetase TERM 3807 2940813 - 2940803 - G 76 -3.2 -5.12068 | overlap 2940787 2940806 CACAGGTAACAAAAA TACC TGC GGCA GCAATCAACGTCTCG TERM 3808 2940861 - 2940842 - G 71 -11.4 -2.98387 | gap 1, overlap 2940839 2940837 CGCCATAAAACAGCA GCGGCGTGG TAT CC-CGCCGC CAGGGCGGTACGCCC CKO_03179 2942482 - 2942093 - | hypothetical protein TERM 3809 2942163 - 2942148 - G 73 -6.2 -4.4874 | opp_overlap 2942143, overlap 2942143 2942162 TTGAAAAAGGTAAAA CGTTTA TTCG TAAACG GGTCAACGCGAACCG CKO_03180 2944680 - 2942542 - | hypothetical protein TERM 3810 2944741 - 2944759 + r 93 -8.8 -4.76041 | opp_overlap 2944741 CGCAGATAAAAAAAA GGGCCACA AAA TGTGACCC TTTTTACTCCATGTC TERM 3811 2944759 - 2944741 - R 100 -11 -6.02914 | opp_overlap 2944741 CGCAGATAAAAAAAA GGGCCACA AAA TGTGACCC TTTTTACTCCATGTC CKO_03181 2945769 - 2944810 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 3812 2945616 - 2945630 + g 76 -2.8 -5.00616 | overlap 2945601 CGGCAAAGATTTTGC GCGT CAGTTCT ACGC TTTTTTCACGCAGAC CKO_03182 2949216 - 2945782 - | DNA polymerase III subunit alpha TERM 3813 2947617 - 2947633 + g 83 -5.8 -4.84359 | CGAATTTGACCAGCC CGGCGT ATTCC ACGTCG TTTTTATCAAACTGC TERM 3814 2948465 - 2948488 + g 74 -7.4 -4.09739 | CGGACGGTCACGTTA CAGCGTTTGG CTAT CTCAACGCTG TTTTCCAGCGCTTCC CKO_03183 2949897 - 2949301 - | ribonuclease HII TERM 3815 2949729 - 2949742 + g 88 -9.5 -4.386 | opp_overlap 2949729, overlap 2949741 TGATTTCATCATACA GCGCC AGAC GGCGC TTTTCTGAGAGCTTC CKO_03184 2951042 - 2949894 - | lipid-A-disaccharide synthase TERM 3816 2950951 - 2950933 - G 83 -11.7 -3.73775 | GCCACGCCGACGAAA CGCGCGT TGGGC ACGCGCG CCTTCAGCGCGCGAA TERM 3817 2951010 - 2950985 - G 79 -11.1 -3.72027 | overlap 2950987 AGCCTGCACCAAGAA TATCGCCGGAG GTTT CTCCGGCGACC AGGGCTATCGTTAAG TERM 3818 2951008 - 2950987 - G 100 -15.9 -3.44284 | overlap 2950985 CCTGCACCAAGAATA TCGCCGGAG GTTT CTCCGGCGA CCAGGGCTATCGTTA CKO_03185 2951524 - 2951042 - | hypothetical protein TERM 3819 2951146 - 2951170 + g 80 -10.7 -3.89614 | opp_overlap 2951168 GTTTAGCTTCATCCA GCGTTTTGCCG CTG CGGTACAACGC TTTGTAAGCGTTGCG CKO_03186 2952421 - 2951834 - | (3R)-hydroxymyristoyl-ACP dehydratase TERM 3820 2952367 - 2952330 - GR 95 -12.7 -4.02005 | overlap 2952332 AAAAGGCAATAATAA CACGGCCTGCCGCAATC ATAT GAATGTGACAGGCCGTA AAAGGATGGCACTAC TERM 3821 2952365 - 2952332 - GR 90 -13.1 -3.57992 | overlap 2952330 AAGGCAATAATAACA CGGCCTGCCGCAATC ATAT GAATGTGACAGGCCG TAAAAGGATGGCACT CKO_03187 2953418 - 2952393 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 3822 2953340 - 2953365 + gr 82 -13.3 -2.97245 | opp_overlap 2953337, overlap 2953334 GCATGGACGCAACGC CGGTGATGACG ATAT CGCCATCACCG TGTAATTCTGCATCC TERM 3823 2953445 - 2953473 + r 79 -11.8 -3.28924 | overlap 2953442 2953465 CCTGTTTCAGTACGT CAGCAGTGATGT CTTTC ACGTCGCTGCTG TTATAAGCAACGGTG CKO_03188 2953868 - 2953422 - | hypothetical protein TERM 3824 2953930 - 2953947 + r 71 -7.7 -3.96216 | overlap 2953931 TCCTTACCATCCCAT TTGTGCC CGCA GGCACAG TTCTTTGCGTGGCCA CKO_03189 2956459 - 2954030 - | outer membrane protein assembly factor YaeT CKO_03190 2957843 - 2956491 - | zinc metallopeptidase TERM 3825 2957556 - 2957566 + g 74 -3.2 -4.89477 | GATAATCGCCGCCCG CTGT CCC ACGG TTTTATTGTTGAAAG TERM 3826 2957743 - 2957727 - G 78 -6.5 -4.59984 | overlap 2957702 AAAACCGATAGAAAA GCGCTCG ACA CGAACAC CGCAGCGCCGGGCAA CKO_03191 2958712 - 2957855 - | CDP-diglyceride synthase CKO_03192 2959414 - 2958725 - | undecaprenyl pyrophosphate synthase TERM 3827 2959549 - 2959596 + r 72 -5.7 -4.42386 | gap 1, overlap 2959552 GCCTTTTGCGCTTCA TCCTTCAGGCTGCCTC-TTCGT TGGCT ATGAATGATGCAACCTGAATGA TTTTGTGCATCCACA CKO_03193 2959708 - 2959553 - | hypothetical protein TERM 3828 2959634 - 2959617 - G 100 -8.4 -5.28176 | opp_overlap 2959617 TGCATCCACAAAAAA GCCGTG TCAAAC CACGGC TTACCTGACCGCATA CKO_03194 2960935 - 2959739 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 3829 2960383 - 2960370 - G 71 -5.9 -4.25104 | GGCGTTTCACGAAAA GGGCC ACCA GACCC GGTAAGCAAAATCGA TERM 3830 2961016 - 2960970 - R 88 -14.5 -3.06762 | gap 1, opp_overlap 2960975, overlap 2960975 AGACAGGATAGAAAG CAAAACGCCGCCCGGAAGACCC GTCA GGGTCAACC-AGCGGCGTTTTA GTCGTACAGGAAAAT TERM 3831 2961011 - 2960975 - R 100 -12.2 -4.65153 | gap 1, opp_overlap 2960975, overlap 2960970 GGATAGAAAGCAAAA CGCCGCCCGGAAGACCC GTCA GGGTCAACC-AGCGGCG TTTTAGTCGTACAGG TERM 3832 2960975 - 2961011 + r 87 -10 -4.30576 | gap 1, opp_overlap 2960975 2960970 GGATAGAAAGCAAAA CGCCGCCCGGAAGACCC GTCA GGGTCAACCAG-CGGCG TTTTAGTCGTACAGG TERM 3833 2961051 - 2961031 - R 72 -6.1 -4.3467 | opp_overlap 2961028 2961031 2961032, overlap 2961032 AGTCGTACAGGAAAA TCAGAACTG CAT CAGTTCCGC TTCTTTTTCCGTCAG TERM 3834 2961050 - 2961032 - R 71 -9.6 -3.2032 | opp_overlap 2961031 2961028 2961032, overlap 2961031 GTCGTACAGGAAAAT CAGAACTG CAT CAGTTCCG CTTCTTTTTCCGTCA CKO_03195 2961552 - 2961031 - | hypothetical protein TERM 3835 2961120 - 2961150 + g 84 -9.1 -4.32857 | overlap 2961119 TCTGTACTTCGTCCT GAGATCGGCGA TCGTCATCT TCGCTGATCTC TTTATCTTTCAGCAG CKO_03196 2962586 - 2961861 - | uridylate kinase TERM 3836 2962631 - 2962647 + rH 89 -10.9 -4.07568 | GATGAGTTAATTCCG GCGACAT TGT ATGTCGC TTTTCAGCGCAGCCA TERM 3837 2962723 - 2962702 - gR 100 -13.7 -4.67755 | opp_overlap 2962702 2962705 AGATGGACGCAAAAA GAAGCCGCC CTCA GGCGGCTCC TTTTCGACAATTAAG TERM 3838 2962702 - 2962723 + Gr 89 -11.5 -4.11484 | opp_overlap 2962702, overlap 2962705 AGATGGACGCAAAAA GAAGCCGCC CTCA GGCGGCTCC TTTTCGACAATTAAG TERM 3839 2962705 - 2962720 + Gr 78 -11.8 -3.08776 | opp_overlap 2962702, overlap 2962702 TGGACGCAAAAAGAA GCCGCC CTCA GGCGGC TCCTTTTCGACAATT CKO_03198 2963630 - 2962734 - | elongation factor Ts TERM 3840 2963413 - 2963429 + Gg 76 -3 -5.13521 | gap 1, overlap 2963411 2963413 TTGATCACGCCGTCA GCA-GCA ACGT TGCCTGC TTTTTTCGCTGCTTT CKO_03197 2962689 - 2963657 + | hypothetical protein TERM 3841 2963665 - 2963649 - TR 100 -10.8 -4.87318 | TTTAAAAGTGAAAAA GGGGCC TAAAG GGCCCC TAACCAAACGTGATA TERM 3842 2963727 - 2963739 + Tr 73 -7.7 -4.16842 | GTGCCTTATTATTCA GCTTC TAC GAAGC TTTCTTCCGCCTGAG CKO_03199 2964445 - 2963720 - | 30S ribosomal protein S2 TERM 3843 2964031 - 2964049 + g 79 -3.1 -5.16237 | gap 1, overlap 2964035 GTTTCTCAAGCTCAC GAGTGCGC ATCA GCGC-TTC TTTTTTGGTCAGCTT TERM 3844 2964035 - 2964046 + g 83 -7.2 -4.67552 | overlap 2964031 CTCAAGCTCACGAGT GCGC ATCA GCGC TTCTTTTTTGGTCAG TERM 3845 2964820 - 2964810 - g 78 -2.4 -5.25805 | overlap 2964811 AAGAAATCGAAAAAA TGCG CGT CGCT GGCCGCCTGGCCGCT TERM 3846 2965110 - 2965127 + G 74 -11.3 -3.28712 | CGTCAAAAATGTTTA TCGTCGG CAAA CCGACGA TTCTGGGCGAGCGCC CKO_03201 2964770 - 2965564 + | methionine aminopeptidase TERM 3847 2965621 - 2965650 + F 100 -13.5 -4.7497 | opp_overlap 2965630 AGCGTTTACCCGTAG GCCGGATAAGGCG TTAA CGCCGCATCCGGC TTTTTAATGGGTGGC TERM 3848 2966034 - 2966015 - g 75 -6.4 -4.59773 | gap 1 CCTGAGCCGTAAAAA GCTGCCCGA CGC TCAGGC-GC AAAAGGTCGGGGAAC TERM 3849 2966349 - 2966332 - g 74 -6.9 -4.35518 | opp_overlap 2966331 AACCCGATATTAAAA GCAGCCC CGGC GGCCTGC GTGATATCCACACCC TERM 3850 2968139 - 2968170 + G 71 -4.2 -4.61231 | overlap 2968141 ACTTATCGCTCTCGA TCAGCCGGGCCTGC TGGC GCGGGTCGGGCAAA TTTTTGCCGATCTGG CKO_03202 2965671 - 2968343 + | PII uridylyl-transferase TERM 3851 2969159 - 2969139 - g 80 -4.6 -5.03314 | gap 1, overlap 2969140 2969141 GTCATCGTGAAAAAA GTCGACGCG AAGA CGCG-CGGC AAAGTCGGGATCAAC CKO_03203 2968374 - 2969198 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 3852 2969228 - 2969214 - f 100 -12.8 -4.64598 | opp_overlap 2969214 CAATGATTTGAAAAA GCGGGC TGA GCCCGC TTTTTTTACATCTGT TERM 3853 2969214 - 2969228 + F 100 -12.8 -5.51402 | opp_overlap 2969214 CAATGATTTGAAAAA GCGGGC TGA GCCCGC TTTTTTTACATCTGT CKO_03204 2969293 - 2969694 + | hypothetical protein TERM 3854 2969715 - 2969727 + T 70 -9.1 -3.30124 | overlap 2969704 GTGTTGCCGGATGGC GGCGT GTT ACGCC TTATCCGGCCTACAG CKO_03205 2970996 - 2969785 - | carbohydrate diacid transcriptional activator CdaR TERM 3855 2971090 - 2971063 - R 100 -15 -3.94381 | ACAGAATGTGAGAAA TGCCCTTTTCCC GGAC AGGAAAAGGGCA AGAGAGGAAATTACT CKO_03206 2972522 - 2971101 - | serine endoprotease TERM 3856 2972194 - 2972174 - G 79 -11.1 -3.71848 | opp_overlap 2972174 2972171 TTGCGGCATCAATAA TGACGCCGG AGC CCAGCGCCA TAAATTTCTGTTGCT CKO_03207 2974169 - 2972655 - | deoxyguanosinetriphosphate triphosphohydrolase TERM 3857 2973697 - 2973730 + g 81 -11.7 -3.57144 | gap 1 CGCAGACGCAGCGCC GCCA-CCGCGCAGCGA TCG TCGCTAAGCGGCTGGC TTTCCGCATCCGCCG TERM 3858 2974209 - 2974190 - H 71 -7.9 -3.85698 | CTCCCGCCTGAGAAA TGCGCTT CCCCTT AAGCGCA TGATAGACTATGCCC CKO_03208 2974253 - 2974951 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 3859 2974960 - 2974980 + G 77 -8.2 -4.14392 | overlap 2974961 2974963 TGGCTAAATTATTCT CCAGGGCG CTGGC CGCCCTGC TTTTAGCCCTTCCGC TERM 3860 2974961 - 2974979 + G 76 -11.7 -3.08314 | overlap 2974960 2974963 GGCTAAATTATTCTC CAGGGCG CTGGC CGCCCTG CTTTTAGCCCTTCCG CKO_03209 2974944 - 2975744 + | vitamin B12-transporter protein BtuF CKO_03210 2975781 - 2976404 + | hypothetical protein TERM 3861 2976493 - 2976481 - T 70 -9.1 -3.30124 | CCGTAGGCCGGATAA GACGC CCT GCGTC GCCATCCGGCAATAC CKO_03211 2976854 - 2976510 - | hypothetical protein TERM 3862 2976947 - 2976966 + r 72 -4.9 -4.58663 | overlap 2976948 CATTCAAGTATTCTC ACCAGCG ACCGAC CGCTGGC TTTTTGCCGCCTGCT CKO_03212 2978356 - 2976935 - | chloride channel protein TERM 3863 2978121 - 2978111 - G 74 -8.2 -4.04318 | CGCAGAGAGGATAAA GGCC AGC GGCC AGACCAGAATCGCGT TERM 3864 2978234 - 2978265 + g 70 -5.1 -4.38712 | gap 1, opp_overlap 2978218, overlap 2978224 CGTGACGGTGCCGAC CACCGC-CGCCGTT AATAA GATGGCCAGCGGTG TTTTATCCCGCTGAA CKO_03213 2978724 - 2978356 - | hypothetical protein TERM 3865 2979713 - 2979728 + G 73 -5.4 -4.55287 | gap 1, overlap 2979713 TTTACCTGGCGCCGT CC-GCCT TCG AGGCAGG TTTTATGTCCGTGGC CKO_03214 2978749 - 2979807 + | hypothetical protein CKO_03215 2981860 - 2979878 - | iron-hydroxamate transporter permease subunit CKO_03216 2982702 - 2981857 - | iron-hydroxamate transporter substrate-binding subunit TERM 3866 2982401 - 2982386 - G 81 -8.2 -4.27316 | opp_overlap 2982392 2982393, overlap 2982387 TCGCTGAAGCTAAAA CCGCGC CCCG GCGCGA TACGCGCCAGCTTTT TERM 3867 2982392 - 2982412 + g 77 -8.1 -4.07568 | opp_overlap 2982387 2982386, overlap 2982393 AAGCTAAAACCGCGC CCCGGCGCG ATA CGCGCCAGC TTTTCAGGCGAAGGG TERM 3868 2982393 - 2982411 + g 72 -11.6 -3.04398 | opp_overlap 2982387 2982386, overlap 2982392 AGCTAAAACCGCGCC CCGGCGCG ATA CGCGCCAG CTTTTCAGGCGAAGG CKO_03217 2983544 - 2982747 - | iron-hydroxamate transporter ATP-binding subunit TERM 3869 2983585 - 2983562 - R 79 -10.2 -3.60792 | overlap 2983563 CGGCCAACTTGTAAA GCGGGCACGG CGAA CCGTGCCCAA AGAGAAATTAGAAAC TERM 3870 2983584 - 2983563 - R 84 -13.7 -2.76261 | overlap 2983562 GGCCAACTTGTAAAG CGGGCACGG CGAA CCGTGCCCA AAGAGAAATTAGAAA CKO_03218 2985842 - 2983593 - | ferrichrome outer membrane transporter TERM 3871 2986125 - 2986112 - RH 70 -9.5 -2.96274 | overlap 2986107 GGCCTGATAAGCACA GCGCC ATCA GGCGC AACGGTTAGTTACTA CKO_03220 2988671 - 2986131 - | penicillin-binding protein 1b TERM 3872 2986401 - 2986423 + gH 80 -9.8 -3.90291 | CACATCTTCCGGCGG CGTCAGCGTC AGC GGCGTTGGCG TTTGGTTCGCCAGAT TERM 3873 2987835 - 2987862 + gH 75 -11.4 -3.08996 | CCAGTAGGAGCGTTC GCTGGTGAGGAA CAGG TTTTTCACCAGC TGTTGCGTCAGCGTA TERM 3874 2988066 - 2988033 - GH 71 -9.5 -3.14132 | GCTGCGCGGCACGAA CAGGCGCTGTTCGCC ATTC GGCGAAGAGAGCATG GTGATCAGGCGCGGA CKO_03219 2988670 - 2988819 + | hypothetical protein TERM 3875 2988863 - 2988876 + Tr 70 -9.5 -3.0263 | opp_overlap 2988828 ATACTTCTTCGTGCG CCGCG TTGG CGCGG TATTCGCCGGATCGT CKO_03221 2991316 - 2988842 - | ATP-dependent RNA helicase HrpB CKO_03222 2991345 - 2991875 + | hypothetical protein TERM 3876 2992245 - 2992266 + G 74 -10.9 -3.61589 | gap 1, opp_overlap 2992234 2992245, overlap 2992241 AAAAGCGAAGTAAAA TACGGC-GCG GAA CGCAGCCGTA TTGATTTCATGTTAC TERM 3877 2992266 - 2992245 - g 93 -10.9 -4.48175 | gap 1, opp_overlap 2992245 2992241, overlap 2992234 AAAAGCGAAGTAAAA TACGGC-GCG GAA CGCAGCCGTA TTGATTTCATGTTAC CKO_03223 2991909 - 2992613 + | sugar fermentation stimulation protein A CKO_03224 2992791 - 2993246 + | DnaK transcriptional regulator DksA TERM 3878 2993254 - 2993236 - f 78 -5.9 -4.85782 | TCCGCGAAAAACAAA TGGCGGG CTAAT CCCGTCA GACCGTAGAACGCCG TERM 3879 2993348 - 2993366 + F 87 -9.5 -4.30704 | overlap 2993329 ATCCGGCAAAATCCG GGCGGGG TTATC TCCCGCC TTATTCTTTTATATT CKO_03225 2993392 - 2994288 + | glutamyl-Q tRNA(Asp) synthetase TERM 3880 2994602 - 2994589 - g 76 -3.1 -5.00616 | overlap 2994590 CTGCTCGGCAAAAAA CCGAA AGAT TTCGA TGTCACCACCAACGC TERM 3881 2994838 - 2994826 - g 70 -9.1 -3.67597 | GGCTCCATTGAAGAA GACGC CCA GCGTC GCGACTTCACCATTA TERM 3882 2995167 - 2995152 - g 72 -2.5 -4.94992 | overlap 2995166 CGAAACCTACAAAAA GCTGC GGGAAT ACAGC CTGTTCCAGCCCCTG CKO_03226 2994391 - 2995755 + | poly(A) polymerase I CKO_03227 2995752 - 2996231 + | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase TERM 3883 2996412 - 2996402 - g 78 -2.4 -5.1485 | TAAGCAAGAGAAAAA GCGC TTC GCGA CTATCACCGCCTACG CKO_03228 2996352 - 2997143 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 3884 2997175 - 2997211 + F 85 -12.4 -3.30124 | gap 2, opp_overlap 2997170 2997194 2997195 CGGATAAAACGCCCT GCGT--CGCCATCCGGCA AAA TGCCTGATGGCGCTACGC TTATCAGGCCTACAA CKO_03229 2997193 - 2998116 + | pantoate--beta-alanine ligase TERM 3885 2998148 - 2998131 - f 93 -9.9 -4.59109 | opp_overlap 2998129, overlap 2998141 GACAGGGGTTAAAAA TCAGGCA ATAC TGCCTGA GAATTTCCTCAAAGC TERM 3886 2998158 - 2998180 + F 82 -12 -3.37071 | opp_overlap 2998141 2998162, overlap 2998162 GCCTGAGAATTTCCT CAAAGCAGGC GAC GCCTGCTTCG TTATCGCTAAGATTT TERM 3887 2998176 - 2998162 - f 82 -11.4 -3.56099 | opp_overlap 2998162 2998158, overlap 2998141 GAGAATTTCCTCAAA GCAGGC GAC GCCTGC TTCGTTATCGCTAAG TERM 3888 2998162 - 2998176 + F 79 -11.4 -3.45945 | opp_overlap 2998141 2998162, overlap 2998158 GAGAATTTCCTCAAA GCAGGC GAC GCCTGC TTCGTTATCGCTAAG CKO_03230 2998209 - 2998589 + | aspartate alpha-decarboxylase TERM 3889 2998648 - 2998617 - f 100 -15.4 -3.3071 | opp_overlap 2998617 2998622, overlap 2998622 ATATTATTATATTAA TAAAAGGAGCCGAA AAAC TTCAGCTCCTTTTA TTTTAAATAATTCCA TERM 3890 2998617 - 2998648 + F 95 -13.2 -4.23892 | opp_overlap 2998617 2998622, overlap 2998622 ATATTATTATATTAA TAAAAGGAGCCGAA AAAC TTCAGCTCCTTTTA TTTTAAATAATTCCA TERM 3891 2998643 - 2998622 - f 100 -10.9 -4.76075 | opp_overlap 2998617 2998622, overlap 2998617 ATTATATTAATAAAA GGAGCCGAA AAAC TTCAGCTCC TTTTATTTTAAATAA TERM 3892 2998622 - 2998643 + F 100 -8.7 -5.10933 | opp_overlap 2998622 2998617, overlap 2998617 ATTATATTAATAAAA GGAGCCGAA AAAC TTCAGCTCC TTTTATTTTAAATAA CKO_03231 2998999 - 2999601 + | hypothetical protein TERM 3893 2999622 - 2999647 + F 100 -17.7 -4.43477 | AGGACTGTTGTTCTT CATCCTCTGGC TTAA GCCAGAGGATG TTTTCGTTACATCCA CKO_03232 2999682 - 3000425 + | putative chaperone protein EcpD TERM 3894 3000530 - 3000540 + F 72 -8.2 -3.70722 | GTCTCGCCATTAGTG CGGC ATT GCCG TTCTCTGTTCATGCG TERM 3895 3000746 - 3000730 - g 73 -5.1 -4.66535 | opp_overlap 3000730 AACGGTGAAAATAAA TCGACGC AAA ACATCGA ATTTAAAGATAACGG CKO_03233 3000601 - 3003090 + | putative outer membrane usher protein CKO_03234 3003163 - 3003750 + | hypothetical protein CKO_03235 3003777 - 3004343 + | hypothetical protein CKO_03236 3004362 - 3004970 + | hypothetical protein CKO_03237 3004979 - 3006094 + | hypothetical protein CKO_03238 3006590 - 3006150 - | hypothetical protein CKO_03239 3007464 - 3006694 - | hypothetical protein CKO_03240 3008387 - 3007461 - | hypothetical protein TERM 3896 3007706 - 3007722 + g 70 -2.9 -4.72986 | TAAACGTCTCGGATT TCAGCTT AGA GAGCAGA TTTTTCATCGAGGTG TERM 3897 3009230 - 3009218 - g 70 -9.1 -3.61764 | opp_overlap 3009217 CGACCAACCGTGAAA CGCTG GAA CAGCG CTATCGTCGGGGGGT CKO_03241 3008620 - 3009282 + | carbonic anhydrase TERM 3898 3009286 - 3009324 + T 71 -7.5 -3.86346 | gap 2, opp_overlap 3009279, overlap 3009291 AACCACAAGTAAACG TGTATTGCCGGGTGGCGGC TAC GCC-TTACCCGGCC-TACA TTTCTACGGACATAG CKO_03242 3009917 - 3009369 - | hypothetical protein TERM 3899 3009863 - 3009883 + g 80 -11.9 -3.45386 | CGGCAATGCGCGCTT TGATCTCCG CTT CGGGGATCA TTACTTCTACAGTAT TERM 3900 3010153 - 3010132 - g 85 -9.4 -4.38637 | AATAACAACGCAAAA GCGCCACG GCTTCT CGTGACGC TGACAGCCCTCTTCG TERM 3901 3012180 - 3012169 - g 80 -4.4 -5.00616 | GTTGTCTGGAAAAAA CGTA TTGG TACG CCGCAGGACAGCATG TERM 3902 3012364 - 3012340 - g 73 -5.6 -4.62872 | AGCAATGGTGAAAAA CTGTGGGAAG GCCGT CTGCCCGCAG GCGGTCAGGCAACGC CKO_03243 3010111 - 3012501 + | hypothetical protein CKO_03244 3014158 - 3012593 - | multicopper oxidase TERM 3903 3014232 - 3014210 - H 74 -11.3 -2.78816 | overlap 3014212 TGACCTTTGAGCATA GACCCTCCC CTTAC GGGAAGGTC AAGTCACAGACGCCC TERM 3904 3014640 - 3014629 - g 71 -7.2 -4.05875 | GCCAAAAAATGCAAA GCGC TGGC GCGC GATTCCCTGAGTTTG CKO_03245 3014326 - 3014673 + | hypothetical protein CKO_03246 3014622 - 3014897 + | hypothetical protein CKO_03247 3014792 - 3015658 + | spermidine synthase CKO_03248 3015674 - 3016468 + | S-adenosylmethionine decarboxylase TERM 3905 3016475 - 3016498 + T 73 -9.5 -3.43751 | overlap 3016473 GCGGTATAAGCGTAA CGGCGGAGC ACGGAG GCTCCACCG TATTTAGCGTTGTTG CKO_03249 3016864 - 3016502 - | hypothetical protein CKO_03251 3017000 - 3016896 - | hypothetical protein CKO_03250 3016866 - 3016988 + | hypothetical protein TERM 3906 3017006 - 3016979 - GT 100 -12.8 -5.4659 | opp_overlap 3016979 3016972 GAATAGAAATAAAAA TGCCCGGTGA CGCAAGGT TCACCGGGCA TTGATGCGTTTTTAC TERM 3907 3016979 - 3017006 + gT 85 -12.8 -3.29973 | gap 1, opp_overlap 3016979, overlap 3016972 GAATAGAAATAAAAA TGCCCGGTGACGC AAG GT-TCACCGGGCA TTGATGCGTTTTTAC CKO_03252 3019665 - 3017041 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 3908 3018937 - 3018951 + g 78 -5.7 -4.72272 | AACGTCGCCCACGTA GGCTA ACGGA TAGCC TTTTTGCTGCAACGC CKO_03253 3019775 - 3019948 + | hypothetical protein TERM 3909 3020217 - 3020201 - g 79 -7.2 -4.43309 | GAACCTGAAGCAAAA GCCGCG TTTAC CGCAGC GCAAATCGATCAATG TERM 3910 3020459 - 3020449 - g 70 -6.8 -4.09685 | GCTGATGGGCGAAAA CCCA ACG TGGG TGCAAAACCTTGGCG CKO_03254 3020039 - 3021595 + | hypothetical protein TERM 3911 3022238 - 3022225 - g 71 -5.9 -4.2349 | TCCCGATAGCGAAAA GGACG GTTT CGCCC TGCTGGCCTGGCCGG CKO_03255 3021605 - 3022399 + | hypothetical protein TERM 3912 3022480 - 3022507 + T 74 -8.5 -3.89346 | opp_overlap 3022486, overlap 3022486 AGGATTTACCCCAAT AAAAAAGCGGC CGCTAA GCCGCTTTTTC TTTATCCACTCAGAA TERM 3913 3022501 - 3022486 - T 100 -8.2 -5.46657 | opp_overlap 3022486 3022480 TACCCCAATAAAAAA GCGGCC GCTA AGCCGC TTTTTCTTTATCCAC TERM 3914 3022486 - 3022501 + T 95 -7.5 -5.38054 | opp_overlap 3022486, overlap 3022480 TACCCCAATAAAAAA GCGGC CGCTAA GCCGC TTTTTCTTTATCCAC CKO_03256 3023952 - 3022525 - | dihydrolipoamide dehydrogenase TERM 3915 3024150 - 3024112 - RH 76 -11.9 -2.66634 | gap 1, opp_overlap 3024115 3024122, overlap 3024122 CACTTCATGAGATTA CCAG-AAAAAAGCCGGCC GTCA GGCCGACTTTTTTGCTTG CTTACATCACCAGAC TERM 3916 3024115 - 3024147 + rH 73 -10 -3.37344 | gap 1, opp_overlap 3024112 3024122, overlap 3024122 TTCATGAGATTACCA G-AAAAAAGCCGGCC GTCA GGCCGACTTTTTTGC TTGCTTACATCACCA TERM 3917 3024139 - 3024122 - RH 100 -10.5 -5.32882 | opp_overlap 3024122 3024115, overlap 3024112 GATTACCAGAAAAAA GCCGGCC GTCA GGCCGAC TTTTTTGCTTGCTTA TERM 3918 3024122 - 3024139 + rH 100 -8.3 -5.32565 | opp_overlap 3024112 3024122, overlap 3024115 GATTACCAGAAAAAA GCCGGCC GTCA GGCCGAC TTTTTTGCTTGCTTA CKO_03258 3026044 - 3024152 - | dihydrolipoamide acetyltransferase TERM 3919 3025729 - 3025764 + Gg 74 -11 -3.18295 | overlap 3025746 3025755 GTACGTGTACGTCTT TCGCTGCCGCAGCAGC AGGA GCGGCTGCCGGAGCGG CTTCTTTCTTCTCTT TERM 3920 3025746 - 3025768 + Gg 70 -5.5 -4.49353 | overlap 3025729 3025755 GCTGCCGCAGCAGCA GGAGCGGCT GCCGG AGCGGCTTC TTTCTTCTCTTCTGC TERM 3921 3025755 - 3025765 + Gg 81 -8.2 -4.33203 | overlap 3025729 3025746 GCAGCAGGAGCGGCT GCCG GAG CGGC TTCTTTCTTCTCTTC CKO_03259 3028722 - 3026059 - | pyruvate dehydrogenase subunit E1 CKO_03257 3024236 - 3026182 + | hypothetical protein TERM 3922 3028759 - 3028813 + Tr 87 -10.9 -3.90112 | gap 1, overlap 3028762 3028765 AATACGTTGATTTGT C-TGGAACCTGTCCCATTGAGCTTTC GCCA GAAAGCGCAATAAGACAGGTTCTGCG TTTAGTTGCCGCGCG TERM 3923 3028762 - 3028809 + Tr 100 -17.2 -2.70979 | overlap 3028759 3028765 ACGTTGATTTGTCTG GAACCTGTCCCATTGAGCTTTC GCCA GAAAGCGCAATAAGACAGGTTC TGCGTTTAGTTGCCG TERM 3924 3028765 - 3028806 + Tr 90 -13.1 -3.49878 | overlap 3028762 3028759 TTGATTTGTCTGGAA CCTGTCCCATTGAGCTTTC GCCA GAAAGCGCAATAAGACAGG TTCTGCGTTTAGTTG CKO_03260 3029650 - 3028886 - | transcriptional regulator PdhR TERM 3925 3029459 - 3029436 - G 74 -6.6 -4.36914 | overlap 3029438 3029458 CTGCTCTGCACAAAA GTTCCGCCGC CCTG GCGACGAAGC AGCAAACCCTTCGCT TERM 3926 3029830 - 3029863 + H 78 -12.7 -2.70932 | opp_overlap 3029830 3029831, overlap 3029837 GTAACTATGCACAAA TGTTAAATTTACTCC CCTG GGAGTAGATTTAACG TAATTGAAACGAGGA TERM 3927 3029863 - 3029830 - H 74 -8.3 -3.95153 | opp_overlap 3029830 3029837, overlap 3029831 GTAACTATGCACAAA TGTTAAATTTACTCC CCTG GGAGTAGATTTAACG TAATTGAAACGAGGA TERM 3928 3029862 - 3029831 - H 78 -11.8 -2.9661 | opp_overlap 3029830 3029837, overlap 3029830 TAACTATGCACAAAT GTTAAATTTACTCC CCTG GGAGTAGATTTAAC GTAATTGAAACGAGG CKO_03261 3029966 - 3030109 + | hypothetical protein TERM 3929 3030397 - 3030432 + G 100 -15.6 -3.71873 | gap 1, opp_overlap 3030396 3030395 3030408 CAGTTAGGTGAAATG GTGGTTGAA-GAGCCGG TTG CCGGTTCGTTCAGCCAC TTTGCCTATAAATAC CKO_03262 3030190 - 3031563 + | aromatic amino acid transporter TERM 3930 3032633 - 3032651 + G 83 -7.3 -4.56736 | overlap 3032628 GACCAATATCGCGCT GGCGCTG TTCTC CTGCGCC TTTTACTTCTTCGAT CKO_03263 3031704 - 3033125 + | hypothetical protein TERM 3931 3034057 - 3034033 - g 93 -12.2 -4.25104 | TCGCTGGGACGAAAA CGGAATGCCA GATTT TGGCATCCCG CCTGCGGATACCGTC CKO_03264 3033125 - 3034075 + | hypothetical protein CKO_03265 3035028 - 3034174 - | regulatory protein AmpE TERM 3932 3034524 - 3034499 - G 71 -10.3 -3.28712 | TGCGGCGTTTGATAA CGCGCCAGCCA GGAC TGCCAGGCGCG CAGAAACGCATAGCC CKO_03266 3035588 - 3035025 - | N-acetyl-anhydromuranmyl-L-alanine amidase CKO_03267 3035676 - 3036569 + | quinolinate phosphoribosyltransferase CKO_03268 3036814 - 3037251 + | putative major pilin subunit TERM 3933 3037506 - 3037494 - gf 72 -10.5 -2.78816 | overlap 3037469 TCATCGCCGACGATA GCCGC ACG GCGGC GGAACTTTTGCAGCA TERM 3934 3037972 - 3037947 - gf 83 -7.5 -4.62069 | CCGGCAGTGGAAAAA CCGTAACGCTC TACA GCGCGCTACAG GCGCGCAACACCCAG CKO_03269 3037226 - 3038647 + | hypothetical protein CKO_03270 3038637 - 3039839 + | type IV pilin biogenesis protein TERM 3935 3039865 - 3039840 - T 77 -10.4 -3.32963 | overlap 3039841 AGCGGTATGGGATAA TGCTGGCGCA TTGTGC TGCGCCAGCG CAGGGGATTACAGGC TERM 3936 3039864 - 3039841 - T 83 -13.9 -2.59564 | overlap 3039840 GCGGTATGGGATAAT GCTGGCGCA TTGTGC TGCGCCAGC GCAGGGGATTACAGG CKO_03271 3040916 - 3039873 - | guanosine 5'-monophosphate oxidoreductase TERM 3937 3040565 - 3040579 + g 74 -2.1 -5.03314 | overlap 3040559 3040554 GTGCCGGGCTCTGCG CCAGA ATCTG TTTGG TTTTTTCGAAATCAG TERM 3938 3040957 - 3040947 - H 75 -3.2 -5.09426 | GTTAATGGCAAAAAA GCGA AAC TCAC AACTCCAGTGACGTT CKO_03272 3040993 - 3041145 + | hypothetical protein TERM 3939 3041606 - 3041653 + G 70 -9.8 -3.45742 | gap 1, opp_overlap 3041606 3041605, overlap 3041607 3041610 ACATGCTGAACAAAT TCTGGCTGCCCAGGCAACGCGTG AAG CACGCCTTGCCGTGGCAGAT-GA TGTTATTGATAATAA TERM 3940 3041610 - 3041650 + G 81 -13.9 -2.87003 | opp_overlap 3041606 3041605, overlap 3041606 3041607 GCTGAACAAATTCTG GCTGCCCAGGCAACGCGTG AAG CACGCCTTGCCGTGGCAGA TGATGTTATTGATAA TERM 3941 3041703 - 3041669 - g 71 -8.5 -3.8211 | gap 1, opp_overlap 3041699 3041700, overlap 3041670 TGTTATTGATAATAA TGGCG-CACCGGACGC TATC GCGTCGGATGTCGCCC GCCTGCACGCGCGCT TERM 3942 3041702 - 3041670 - g 75 -12 -2.88945 | gap 1, opp_overlap 3041699 3041700, overlap 3041669 GTTATTGATAATAAT GGCG-CACCGGACGC TATC GCGTCGGATGTCGCC CGCCTGCACGCGCGC CKO_03273 3041142 - 3041762 + | dephospho-CoA kinase TERM 3943 3041872 - 3041886 + G 77 -3.5 -5.09225 | opp_overlap 3041872 GCCCCTCGCAGATCA TGCGG ACGCC CTGCA TTTTTTCCGTAACAT CKO_03274 3041762 - 3042505 + | hypothetical protein CKO_03275 3042515 - 3042709 + | zinc-binding protein CKO_03276 3043194 - 3042805 - | nucleoside triphosphate pyrophosphohydrolase TERM 3944 3043232 - 3043215 - R 100 -12.7 -5.29782 | opp_overlap 3043215 3043212 TACATCCATAAAAAA GGCGCAG TCAC CTGCGCC TCATTGTCTTTATTC TERM 3945 3043215 - 3043232 + r 80 -12.7 -3.02851 | opp_overlap 3043215, overlap 3043212 TACATCCATAAAAAA GGCGCAG TCAC CTGCGCC TCATTGTCTTTATTC CKO_03277 3045958 - 3043253 - | preprotein translocase subunit SecA TERM 3946 3044183 - 3044170 - G 74 -4.5 -4.70659 | opp_overlap 3044170 GGTCAGAGGCAAAAA TACGC ATCA GCGCA TCTTCCATTGACAGA TERM 3947 3044448 - 3044497 + g 70 -9.9 -3.35813 | gap 1, opp_overlap 3044492 CGACCGGCCATGTTG GTGGCGATAGTGACCGCAGCCGGG TAG CCCGCCTGTGCA-ACAATCGCCGC TTCGTTGGCGTGGAA CKO_03278 3046457 - 3046020 - | SecA regulator SecM TERM 3948 3046662 - 3046649 - R 76 -5.3 -4.91109 | opp_overlap 3046661, overlap 3046661 CGCTGAGGATAAAAA TGCTT AAGA AAGCA GCGAACGCACTGTAT TERM 3949 3046716 - 3046701 - R 72 -3.2 -4.99638 | AGAGGCAGAGAAAAA GGCG AAGGCAAA CGCC GGACGGAAGAGATAA TERM 3950 3046780 - 3046737 - R 100 -11.1 -5.80248 | opp_overlap 3046736, overlap 3046774 GAAGAGATAAAAAAA CGACTGGCTTACCTGGC CGGAGAGGGT GCCAGATTAACCAGTCG AATTTATGCGACAGG CKO_03279 3047845 - 3046928 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase CKO_03280 3049097 - 3047946 - | cell division protein FtsZ CKO_03281 3050421 - 3049159 - | cell division protein FtsA CKO_03282 3051248 - 3050418 - | cell division protein FtsQ TERM 3951 3051150 - 3051132 - G 73 -8.8 -3.86346 | opp_overlap 3051146, overlap 3051134 3051146 CCAGCCGCTGACAAA CACGGTGC AGA GCACCGTC AGCAGGAACAGTATT TERM 3952 3051148 - 3051134 - G 77 -11.4 -3.52113 | opp_overlap 3051146, overlap 3051132 3051146 AGCCGCTGACAAACA CGGTGC AGA GCACCG TCAGCAGGAACAGTA CKO_03283 3052170 - 3051250 - | D-alanine--D-alanine ligase TERM 3953 3051393 - 3051376 - G 73 -5.5 -4.57353 | TTCCAGCAGATAAAA CTGGCCA TCGC TGTCCAG CATGACGTCGATGCG CKO_03284 3053638 - 3052163 - | UDP-N-acetylmuramate--L-alanine ligase TERM 3954 3052789 - 3052801 + g 76 -9.1 -3.96148 | GCGCATTCAGCGTCA CCTGC ATT GCAGG TTTATCCTGACGCAG CKO_03285 3054758 - 3053691 - | N-acetylglucosaminyl transferase TERM 3955 3053857 - 3053867 + g 71 -8.2 -3.85698 | opp_overlap 3053835, overlap 3053835 TGCTCAAAAATTTTG GCGG CCC CCGC TTTCTCCAGCGGCAG CKO_03286 3055972 - 3054755 - | cell division protein FtsW CKO_03287 3057315 - 3055999 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 3956 3056657 - 3056627 - G 74 -7.5 -4.13945 | gap 1, overlap 3056631 ATGTTGACGCCAAAA CTG-ACGCAACGCG CATC CGCGCCGCGTACCG GCATGGTCAGCGCGT CKO_03288 3058400 - 3057318 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 3957 3057402 - 3057371 - G 74 -8.6 -3.97674 | overlap 3057372 GCATCAGCGAAATAA TCCAGAAGCGCACG ATAA CGCGCGGTTCCGGC CAGCCTTTCAGTTCA TERM 3958 3057401 - 3057372 - G 75 -12.1 -2.98122 | overlap 3057371 CATCAGCGAAATAAT CCAGAAGCGCACG ATAA CGCGCGGTTCCGG CCAGCCTTTCAGTTC TERM 3959 3057554 - 3057540 - G 74 -4.2 -4.7871 | overlap 3057541 AATCACCAGCAAAAA CTCCTG ACG CAGCAG CACCGCGATGATGCC CKO_03289 3059752 - 3058394 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CKO_03290 3061236 - 3059749 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 3960 3059847 - 3059863 + g 72 -2.1 -4.88918 | CATGCCCTTTACCCG CGACCAG AAC CACGTCG TTTTCTTTCGCCTGC TERM 3961 3060844 - 3060875 + g 70 -2.8 -4.77896 | opp_overlap 3060840, overlap 3060845 3060847 TTCGCCAAGCAGTTG GCTCCACTGCGCCA GCAG TTGCGTGGTGGTGG TTTTTCCGTTCGTTC CKO_03291 3062989 - 3061223 - | hypothetical protein TERM 3962 3061253 - 3061269 + g 74 -2.3 -5.03145 | TGTTCCCTCGCCTTG GTTAATT ACA AATTCAC TTTTTTCGCCCGTTG TERM 3963 3061469 - 3061489 + g 76 -3.2 -5.03314 | gap 1, overlap 3061472 AATGTATTTGTTGAT GTAGCGGCC ATCC GGCCCC-AC TTTTTTCGCCGTACC TERM 3964 3061759 - 3061743 - G 70 -8.7 -3.63805 | opp_overlap 3061743 3061745 AGCCCATAGCCGAAA GAGAAGG TGG CCCTCTC TATGTCAGACCACCG TERM 3965 3061994 - 3062012 + g 88 -11 -4.07568 | ATTAATTCGATATGG CACCGTGT TCA GCACGGTG TTTTCACGCACAACC TERM 3966 3062923 - 3062941 + g 76 -8.9 -3.99374 | opp_overlap 3062923 3062922 ACAGCAACGCAAAAC GCCAACT GACAA AGTTGGC TTGTTCTTCCTGGCG CKO_03292 3063370 - 3063005 - | cell division protein FtsL TERM 3967 3063290 - 3063277 - G 74 -6.7 -4.24002 | TCCCAAATCGCAAAA GATCG TCAC CGATC ACGCCAGGCAAAGCA CKO_03293 3064311 - 3063367 - | S-adenosyl-methyltransferase MraW TERM 3968 3063621 - 3063635 + g 78 -7 -4.58663 | opp_overlap 3063603 GCCCACCCGGGGCCA GCACGC TGA GCGAGC TTTTTAGCGCCTGCT CKO_03295 3064769 - 3064311 - | cell division protein MraZ CKO_03294 3064768 - 3064914 + | hypothetical protein CKO_03296 3065261 - 3065052 - | hypothetical protein CKO_03297 3066464 - 3065412 - | DNA-binding transcriptional regulator FruR CKO_03298 3066614 - 3066477 - | hypothetical protein TERM 3969 3066504 - 3066514 + gr 87 -8.2 -4.65747 | CGCAGAATAGTGACT GCGG CAA CCGC TTTTATTCCGGGTTA CKO_03299 3066678 - 3066517 - | hypothetical protein TERM 3970 3066569 - 3066551 - G 100 -8.1 -5.75945 | ATTTCGCAAAAAAAA GCCAACG GGTAG CGTCGGC GGAGGTTGAGACGTC TERM 3971 3066657 - 3066630 - GR 71 -10.6 -2.59564 | gap 1, opp_overlap 3066608 3066602, overlap 3066602 3066629 CCGGCAGGGTATAAT GGCCTGAT-GGCG CTT CGCTTATCAGGCC TACAATTGAAAGACA CKO_03300 3067203 - 3066682 - | acetolactate synthase 3 regulatory subunit CKO_03301 3068900 - 3067176 - | acetolactate synthase 3 catalytic subunit TERM 3972 3068790 - 3068762 - GR 77 -10.3 -3.37796 | GTTCATGACGGACAA GCACATGATCGAT ACC ACCGACCGTGTGC AGCGCATCATAAATA TERM 3973 3069212 - 3069175 - R 100 -10.1 -4.86133 | CACACAGACGAAAAA GCAGAATAAACCAGA TATTTCAC TCTGATTTATTCCGC CCGTATTCACTTTTG CKO_03302 3070163 - 3069219 - | leucine transcriptional activator TERM 3974 3069387 - 3069406 + g 81 -12.2 -3.53091 | opp_overlap 3069383 GGCTAACCAACGCGG CGCAACTG CCAC CAGTTGCG TTTGAGAGACAACAT CKO_03303 3070414 - 3070238 - | hypothetical protein TERM 3975 3070956 - 3070927 - H 90 -15.1 -2.50492 | opp_overlap 3070933, overlap 3070933 CAGCATCAGTAAGAT TAAAAACCCGCGC CGTT GCGCGGGTTTTTT TATGCTCGAAGCAAG TERM 3976 3070933 - 3070950 + H 100 -14.1 -5.67063 | opp_overlap 3070927 3070933 CAGTAAGATTAAAAA CCCGCGC CGTT GCGCGGG TTTTTTTATGCTCGA TERM 3977 3070950 - 3070933 - H 100 -14.1 -4.89233 | opp_overlap 3070933, overlap 3070927 CAGTAAGATTAAAAA CCCGCGC CGTT GCGCGGG TTTTTTTATGCTCGA TERM 3978 3072267 - 3072257 - g 71 -8.2 -3.86202 | GGCGACGACATCAAA GCGG AAG CCGC GAACGGCAACGGCCC TERM 3979 3072534 - 3072524 - g 70 -5.4 -4.44355 | GAAGTCGAAAAAGAA TTGC AAC GCAA AGCTCAGAATAAAGA CKO_03304 3071000 - 3072571 + | 2-isopropylmalate synthase CKO_03305 3072571 - 3073662 + | 3-isopropylmalate dehydrogenase TERM 3980 3074412 - 3074397 - g 90 -10.4 -4.23892 | overlap 3074380 TTCAACTACGTAAAA GGGCGT CTGC ACGCCC CGAAAGGCAGCGATT TERM 3981 3075003 - 3075034 + G 81 -13.6 -2.91322 | overlap 3075000 ACGCATCTGGTTAGC CCGGCGATGGCTGC CGCT GCCGCCGTCACCGG TCATTTCGCCGATAT CKO_03306 3073665 - 3075065 + | isopropylmalate isomerase large subunit CKO_03308 3075767 - 3075552 - | hypothetical protein CKO_03307 3075076 - 3075681 + | isopropylmalate isomerase small subunit TERM 3982 3075753 - 3075707 - GT 78 -12.5 -2.62263 | opp_overlap 3075737 3075738, overlap 3075693 ACCTGCCGGATAGCA CTTCG-TTTATCCGGCCTGTCAC TCT GTGT-AGGCCGGATAAGGCGAAG CCGTCATCCGGCATT TERM 3983 3075737 - 3075766 + gT 86 -7.1 -5.03715 | gap 1, opp_overlap 3075707, overlap 3075738 CTGTCACTCTGTGTA GGCCGGAT-AAGGC GAA GCCGTCATCCGGCA TTTTTTACACATCCT TERM 3984 3075738 - 3075765 + gT 79 -10.6 -3.61506 | gap 1, opp_overlap 3075707, overlap 3075737 TGTCACTCTGTGTAG GCCGGAT-AAGGC GAA GCCGTCATCCGGC ATTTTTTACACATCC CKO_03309 3076949 - 3075771 - | hypothetical protein TERM 3985 3076406 - 3076384 - G 72 -4.1 -4.78237 | overlap 3076392 GAGGGCAGAATAAAA GCAATCAAC GCCAG GCTGATGGC GAATATGCCGGCGGC TERM 3986 3076856 - 3076836 - G 81 -6.7 -4.68593 | TTCACGACTCAAAAA CAGGCTCAG CGT CGGTGCCTG CAACGCTCCCGCCAC TERM 3987 3077013 - 3076991 - R 100 -10.6 -5.37593 | overlap 3077002 GCCGAAACGAAAAAA GCCAGCAG GAATTAT CTGCTGGC GCGGCGATAAACACC CKO_03311 3077209 - 3077072 - | hypothetical protein CKO_03313 3077319 - 3077176 - | hypothetical protein TERM 3988 3077461 - 3077491 + GH 79 -11.1 -3.32022 | GACGTGGGAGGCGGA GGTCGGACGCGGG AAACG CTCCCGTCTGACC TTCCTCTATACCGGG TERM 3989 3077599 - 3077589 - gH 81 -8.2 -4.36914 | overlap 3077590 TGGTGGGCGACAAAA CCGC CGT GCGG CAAATGCTGGTGTCC TERM 3990 3078278 - 3078263 - gH 72 -2.4 -4.88228 | overlap 3078254 3078273 ACCGAAGATGAAAAA GCCATC GAAA GCCGGC TGGAAGAGGGCTGCT TERM 3991 3078491 - 3078479 - gH 72 -4.7 -4.61231 | GGACACGGCGAAAAA CCCGC CGG GCTGG AGACGATCACGCTGA CKO_03312 3077288 - 3078943 + | transcriptional regulator SgrR TERM 3992 3079078 - 3079102 + FH 72 -9.4 -3.5394 | opp_overlap 3079068 ATAACGCCGGCGAAG GGATTTGAGA CTGCT TCTCAAGTCC TTTGCCACCCACTTT TERM 3993 3079266 - 3079256 - g 84 -3.2 -5.32944 | overlap 3079248 CCGACAATCAAAAAA GCCT TTG AAGC TGACTGTGATTGCGA TERM 3994 3079358 - 3079348 - g 74 -4.6 -4.75776 | AATGGAAGGGAAAAA CAGC AAA GCCG ACGTGGTGCTTGGCC CKO_03314 3079118 - 3080113 + | thiamine transporter substrate binding subunit TERM 3995 3080359 - 3080386 + G 76 -12 -3.09004 | overlap 3080355 TTTCCCGGACGTCTT GCGTTATTGCGC CTGT GCGCCATGACGC TGATTTTACCGGTGC TERM 3996 3080675 - 3080695 + G 74 -3.2 -4.97666 | gap 1, opp_overlap 3080675 3080676, overlap 3080677 3080678 GGATGCGTCGTCAAA TC-CCGCCG GTGG CGGCGCTGA TTTTTATGCTCTGTT TERM 3997 3080998 - 3081013 + G 74 -8.2 -3.99374 | CTGCTGTTGCTTCTC CCGCCG CTGC TGGCGG TTATTATTGATGGCG TERM 3998 3081122 - 3081142 + G 77 -7.6 -4.36914 | CGGCGGGAGTGCTGT GCGTCATC CTGAC GATGATGC TTTTATGGAGCAGCC TERM 3999 3081243 - 3081255 + G 75 -6.9 -4.49314 | TATGCCCGGCATCGT GCTGG CGA CCGGC TTCTTTTTACTGCTC CKO_03315 3080089 - 3081699 + | thiamine transporter membrane protein CKO_03316 3081683 - 3082381 + | thiamine transporter ATP-binding subunit CKO_03317 3083241 - 3082474 - | hypothetical protein CKO_03318 3084206 - 3083361 - | DNA-binding transcriptional regulator AraC TERM 4000 3084007 - 3084027 + g 75 -11.9 -2.96249 | overlap 3084004 AAAATATCCCCCGGA CGGCAGACA AAC TGTTTGCCG TGGTTATTGATCACC CKO_03319 3084547 - 3086256 + | ribulokinase TERM 4001 3087387 - 3087356 - g 95 -8 -5.06414 | gap 1 GCGGTGGAAGAAAAA CCGATCCTCGACGTG CAG CACCTCG-GCATCGG AGGTAAAGACGCGCC CKO_03320 3086267 - 3087769 + | L-arabinose isomerase TERM 4002 3087843 - 3087793 - f 100 -23.7 -3.53444 | gap 2, opp_overlap 3087785 3087811 GGATGGCGGCGTAAA TGC-CTTATCCGGCCTAC-AGGTCG CAC CAACCTTGTAGGCCGGATAAGCGCA GCGCCATCCGGCGTG TERM 4003 3088414 - 3088404 - g 71 -4.6 -4.57073 | CACCTGGGGCAAAAA CGCC GAA GACG CGGTGCATAACGCCA CKO_03321 3087868 - 3088563 + | L-ribulose-5-phosphate 4-epimerase TERM 4004 3088620 - 3088640 + F 85 -6.2 -5.1675 | gap 1, opp_overlap 3088620 GCAAAACGTTCCAAA CCAGGCTAT AATC AT-GCCTGG TTTTTTAATGAGTAC CKO_03322 3088661 - 3091012 + | DNA polymerase II TERM 4005 3092723 - 3092681 - g 72 -11.8 -2.72144 | opp_overlap 3092713, overlap 3092680 TGATCTGCGCGAAAG CCGCCACCGCGCTGCAACTG GAG CAGGTGCTGCGCGAGCGCGA AGGCATCCGCGCCGC TERM 4006 3093583 - 3093565 - g 100 -8.8 -4.85782 | CTGTTGAAAAACAAA GCGTTGCC GGT GGGAACGC TGCTGGTGGAACTGG TERM 4007 3093703 - 3093687 - g 72 -3.6 -4.82901 | overlap 3093696 3093697 GCTGCTGGATAAAAA CGGCAA TAACC TGGCCG CGCAGGTGGAGTTTG TERM 4008 3094001 - 3093989 - g 73 -9.1 -3.77219 | AGCAGGTAATGGAAA GCCTG GAT CAGGC CAACTGGCGTCTGGA CKO_03323 3091144 - 3094050 + | ATP-dependent helicase HepA TERM 4009 3094371 - 3094392 + G 71 -10.1 -3.52204 | overlap 3094367 CGCGTGTGGGGGCAT CCAGCCCCT GCCG AAGGGCTGG TTGATTTACCGCTGA CKO_03324 3094062 - 3094721 + | 23S rRNA/tRNA pseudouridine synthase A TERM 4010 3094751 - 3094795 + T 72 -9.4 -3.65351 | opp_overlap 3094781 3094791, overlap 3094752 TGTGCCGGGGGCGCT TCG-CTTGCCCGGCCTACCGTT CTC AACG-TAGGCCGGATAAGACGC TTTACGTCGCCATCC TERM 4011 3094752 - 3094794 + T 82 -12.9 -2.78996 | opp_overlap 3094781 3094791, overlap 3094751 GTGCCGGGGGCGCTT CG-CTTGCCCGGCCTACCGTT CTC AACG-TAGGCCGGATAAGACG CTTTACGTCGCCATC CKO_03325 3095636 - 3094821 - | Dna-J like membrane chaperone protein TERM 4012 3095279 - 3095293 + g 76 -2.8 -5.0538 | opp_overlap 3095271 GCCCAAAGCAGACGC TGCG AAACTGG CGCA TTTTTTCACGTAACG TERM 4013 3098060 - 3098049 - g 75 -3.6 -4.93296 | GGAGCAGTATAAAAA CGGG ATTT CCCA GGTCGGGGGCGTTGC TERM 4014 3098262 - 3098242 - g 74 -7.6 -4.16837 | GATAACGATAAAGAA CACGCTGT TTATG ACAACGTG ATCGGCTTTAACATT CKO_03326 3096013 - 3098364 + | organic solvent tolerance protein CKO_03327 3098418 - 3099704 + | peptidyl-prolyl cis-trans isomerase SurA TERM 4015 3099733 - 3099752 + G 95 -15 -3.2327 | overlap 3099722 ACGCGTTGTTATCAC TCCCGGCG AACC CGCCGGGA TTGGTCCTGACTTAG CKO_03328 3099704 - 3100693 + | 4-hydroxythreonine-4-phosphate dehydrogenase CKO_03329 3100690 - 3101511 + | dimethyladenosine transferase CKO_03332 3101918 - 3101574 - | hypothetical protein CKO_03330 3101514 - 3101891 + | ApaG CKO_03331 3101902 - 3102750 + | diadenosine tetraphosphatase TERM 4016 3102804 - 3102774 - TR 70 -8.9 -3.30124 | opp_overlap 3102784 TTGTAGGCCGGATAA GGCGTTTACGCCG CTATC CGGCATTCACGCC ACATTATTGCCTGAT CKO_03333 3103346 - 3102867 - | dihydrofolate reductase CKO_03334 3105447 - 3103585 - | glutathione-regulated potassium-efflux system protein KefC TERM 4017 3104270 - 3104298 + g 71 -4.3 -4.56775 | TCCGCATCGATCTCA TCCGCTTCACGCG CTT CGCCGGTTGCGGA TTTTTCCAGACGGCT TERM 4018 3104345 - 3104331 - G 72 -2.1 -4.93296 | gap 1, overlap 3104332 3104333 GGAGCACCAGAAAAA TGGGCG TCGC CGCC-A TTGAGAGCGCAACGG TERM 4019 3104920 - 3104908 - G 70 -9.1 -3.65425 | overlap 3104910 CGCAGACAGCGCAAA GACGC CCA GCGTC GTTGAGGCGCTGCTG CKO_03335 3105970 - 3105440 - | glutathione-regulated potassium-efflux system ancillary protein KefF CKO_03336 3106308 - 3106075 - | hypothetical protein TERM 4020 3106190 - 3106220 + g 75 -3.9 -4.86001 | TCGACCTGTGGTTTA CCATCGGTGACGA TCGTT TTGCCGTCGGTGG TTTTTATGGCCTGGT CKO_03337 3107847 - 3106411 - | hypothetical protein TERM 4021 3107285 - 3107267 - G 72 -11.7 -2.80113 | CAGTAGCCGACCAGA TCGGCGC AGGTG GCGCCGA CGTACCACATCGCGG TERM 4022 3107729 - 3107754 + g 76 -3.1 -5.13343 | gap 1, overlap 3107732 ATGTCGTCAAAGTTC CTGGGCTGCTGC ATA GCCGC-GTCCTG TTTTGTTTTCACTTG CKO_03338 3108147 - 3107860 - | hypothetical protein CKO_03339 3109430 - 3108144 - | putative oxidoreductase FixC TERM 4023 3108199 - 3108217 + g 95 -5.2 -5.40072 | overlap 3108201 TTGATGAAGCCCACT TTCTTCGC GTG GCGCAGGA TTTTTTTACGCACAG CKO_03340 3110373 - 3109492 - | putative electron transfer flavoprotein FixB CKO_03341 3111255 - 3110449 - | putative electron transfer flavoprotein FixA TERM 4024 3110592 - 3110616 + g 84 -2.7 -5.40072 | opp_overlap 3110591 3110592 CACTGAAACCAATAT CCGCCGCAG ACCAGAC CTGCACCGG TTTTTTTGCCGCGCC CKO_03342 3111502 - 3111672 + | hypothetical protein CKO_03343 3111700 - 3113217 + | L-carnitine/gamma-butyrobetaine antiporter TERM 4025 3114155 - 3114135 - g 76 -5.3 -4.75404 | overlap 3114138 AAACTCCATGAAAAA CATGCTGCT GGA AGCCGCGTG GAAAGCGGATAACGG CKO_03344 3113251 - 3114393 + | crotonobetainyl-CoA dehydrogenase TERM 4026 3114984 - 3114997 + G 71 -9.5 -3.53811 | overlap 3114982 ATGACCGCCACCACC GCCGC GCTG GCGGC TTTGCACAGAGTGCG CKO_03345 3114465 - 3115667 + | crotonobetainyl-CoA:carnitine CoA-transferase TERM 4027 3115670 - 3115707 + F 72 -10.6 -2.78032 | gap 1, opp_overlap 3115675, overlap 3115669 3115667 AGTTGAGGATTAAAC GCA-AAGCGCTAACCGG TTTAT CCGGTTAGCGCGCATGC CTATTTTCGAACGGA TERM 4028 3115701 - 3115675 - f 100 -18.1 -3.87551 | opp_overlap 3115670 3115669 3115667 AGGATTAAACGCAAA GCGCTAACCGG TTTAT CCGGTTAGCGC GCATGCCTATTTTCG CKO_03346 3115733 - 3117286 + | putative crotonobetaine/carnitine-CoA ligase TERM 4029 3117559 - 3117528 - g 83 -10 -4.18018 | gap 1, opp_overlap 3117528 3117529, overlap 3117529 GGCTGGGATTTAAAA GCGGCGGCCGAAGGC GAA GCC-CCGGACGCCGA TTTTGGCCCCGGCGG TERM 4030 3117528 - 3117559 + G 74 -7.8 -4.07568 | gap 1, opp_overlap 3117528 3117529, overlap 3117529 GGCTGGGATTTAAAA GCGGCGGCCGAAGGC GAA GCCC-CGGACGCCGA TTTTGGCCCCGGCGG TERM 4031 3117529 - 3117558 + G 72 -11.3 -3.04398 | gap 1, opp_overlap 3117529 3117528, overlap 3117528 GCTGGGATTTAAAAG CGGCGGCCGAAGGC GAA GCCC-CGGACGCCG ATTTTGGCCCCGGCG TERM 4032 3117558 - 3117529 - g 84 -13.5 -3.10597 | gap 1, opp_overlap 3117528 3117529, overlap 3117528 GCTGGGATTTAAAAG CGGCGGCCGAAGGC GAA GCC-CCGGACGCCG ATTTTGGCCCCGGCG CKO_03347 3117327 - 3118112 + | carnitinyl-CoA dehydratase TERM 4033 3118747 - 3118722 - g 83 -9.7 -4.18506 | gap 1, overlap 3118723 CCAGGTCGAAAAGAA CCGGCCGCGCCT GAA AGGCACGAC-GG AGGTGAAGCCAAAAT CKO_03348 3118177 - 3118770 + | carnitine operon protein CaiE CKO_03349 3119262 - 3118870 - | DNA-binding transcriptional activator CaiF TERM 4034 3118947 - 3118962 + g 77 -8.2 -4.20712 | overlap 3118938 GCGGAACCGGCATTC GCGGGG TTCT CTCCGC TTTTACCATCTTCTC TERM 4035 3119471 - 3119488 + r 100 -9.9 -4.96848 | opp_overlap 3119471 TATGGCGTAAAAAAA GGTTCCT TTGC AGGAACC TTTTTATATCACCAG TERM 4036 3119488 - 3119471 - R 100 -9.9 -5.41143 | opp_overlap 3119471 TATGGCGTAAAAAAA GGTTCCT TTGC AGGAACC TTTTTATATCACCAG CKO_03350 3122745 - 3119521 - | carbamoyl phosphate synthase large subunit CKO_03351 3123939 - 3122764 - | carbamoyl phosphate synthase small subunit CKO_03352 3123961 - 3124125 + | hypothetical protein TERM 4037 3124319 - 3124290 - g 100 -10.3 -4.69622 | gap 1, opp_overlap 3124293 3124295, overlap 3124293 AGATAATGCTAAAAA TA-ATAGGGCAATA AAT TATTGCCCTATGTA ATCAACAAATTATGA TERM 4038 3124315 - 3124293 - g 100 -13.6 -4.44355 | opp_overlap 3124293 3124295, overlap 3124290 TAATGCTAAAAATAA TAGGGCAATA AAT TATTGCCCTA TGTAATCAACAAATT TERM 4039 3124293 - 3124315 + G 79 -13.6 -2.78715 | opp_overlap 3124293 3124290, overlap 3124295 TAATGCTAAAAATAA TAGGGCAATA AAT TATTGCCCTA TGTAATCAACAAATT TERM 4040 3124295 - 3124313 + G 75 -11.8 -2.94099 | opp_overlap 3124293 3124290, overlap 3124293 ATGCTAAAAATAATA GGGCAATA AAT TATTGCCC TATGTAATCAACAAA CKO_03353 3124159 - 3124320 + | hypothetical protein CKO_03354 3125190 - 3124369 - | hypothetical protein TERM 4041 3124441 - 3124410 - G 70 -3 -4.81551 | CACTCATATCAAAAA GACCATTTGGCT TTGATTTT AGCCAGATAGCC GATCTGACCGCGCCA TERM 4042 3125341 - 3125330 - R 71 -7.2 -4.10657 | CTATATGCGGGAAAA GCGG GACA CCGC AGGCAACTCTGCCTG CKO_03355 3125934 - 3125377 - | hypothetical protein CKO_03356 3126097 - 3126996 + | hypothetical protein CKO_03357 3127907 - 3126993 - | ribonucleoside hydrolase RihC TERM 4043 3127999 - 3127963 - R 93 -13.8 -3.58343 | CCGATTATTGGCAAA CCTTTTGCCGGTTGGC AAGCG ACCGACCGACAAAAGG AGACGAAACAAAATT CKO_03358 3128943 - 3128056 - | hypothetical protein CKO_03359 3130311 - 3128944 - | hypothetical protein TERM 4044 3130039 - 3130018 - G 74 -6.5 -4.3255 | gap 1, opp_overlap 3130030, overlap 3130019 CGCGGAAGGAATAAA GGTCG-CGCA AAT TGCGGCGGCC CCCAGTTTGCCGACG TERM 4045 3130110 - 3130100 - G 100 -6.8 -5.58209 | GCAAAGCCAAAAAAA GCCA GCG TGGC GACCATCACGACAAT CKO_03360 3130438 - 3130626 + | hypothetical protein TERM 4046 3130891 - 3130871 - g 76 -3.1 -5.10497 | opp_overlap 3130873, overlap 3130873 AATTTATGCAAAAAA TAGCCGCGC ATA GCGACGCCA GTTTTATTGTTATCG TERM 4047 3132218 - 3132232 + G 71 -10 -3.54424 | TATTTACGTTGTTTA TTCCCG CTA CGGGAA TTTCCCGCAGTCCCG CKO_03361 3130645 - 3132282 + | hypothetical protein CKO_03362 3132272 - 3132964 + | hypothetical protein TERM 4048 3133002 - 3132975 - T 95 -11.2 -4.42788 | overlap 3132965 3132978 CGTAATGGCATAAAA GATGCCGGTCGG ATAG CAGACCGGCGTC AAAGCGTAATTACTC TERM 4049 3132999 - 3132978 - T 74 -11.5 -2.88446 | overlap 3132965 3132975 AATGGCATAAAAGAT GCCGGTCGG ATAG CAGACCGGC GTCAAAGCGTAATTA CKO_03363 3133962 - 3133012 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 4050 3133329 - 3133357 + g 78 -12.3 -3.21747 | CGACATCGGCCTGTT CCGCCAGCGCGCG CAC CGCTTCCTGGCGG TTCGTCGTGGCGTAG CKO_03364 3134413 - 3133964 - | hypothetical protein CKO_03365 3135082 - 3134594 - | lipoprotein signal peptidase CKO_03366 3137898 - 3135082 - | isoleucyl-tRNA synthetase TERM 4051 3136743 - 3136764 + g 71 -9.5 -3.55622 | gap 1 CTTTTTCACGCAGCA GCGCAACGAC GAT GTCGTT-CGC TTTGAAAACGTTCAC TERM 4052 3137732 - 3137750 + g 89 -3.1 -5.63857 | TTCGCATAAGGAGGG CCATCAT GCAGA ATGAAGG TTTTTTTGCCTTTTT CKO_03367 3138874 - 3137936 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 4053 3137986 - 3137998 + g 85 -9.1 -4.45544 | CAGTTAACTCATCAC GCGCA ATC TGCGC TTTTAGTTCATCCAG TERM 4054 3138011 - 3138028 + g 70 -9.9 -3.42274 | overlap 3138019 CGCTTTTAGTTCATC CAGCGAT GCGA ATCGCTG TTCGTTGCGTATTTT TERM 4055 3138482 - 3138471 - G 75 -5.8 -4.57882 | overlap 3138472 TGTAATAACAAGAAA TCGC CTTC GCGA CCAGCGCCAAAACGG CKO_03368 3139281 - 3139466 + | hypothetical protein TERM 4056 3139490 - 3139519 + T 87 -14.5 -2.87931 | opp_overlap 3139497 3139498, overlap 3139498 TTGTTATCAGCTTTG TAAAAAAGCCCGC GCAA GCGGGTTTTTTTA TGTCTGCCGGATGGC TERM 4057 3139512 - 3139497 - T 80 -6 -5.0133 | opp_overlap 3139490 3139498, overlap 3139498 CAGCTTTGTAAAAAA GCCCGC GCAA GCGGGT TTTTTTATGTCTGCC TERM 4058 3139511 - 3139498 - T 75 -9.5 -3.60316 | opp_overlap 3139490 3139498, overlap 3139497 AGCTTTGTAAAAAAG CCCGC GCAA GCGGG TTTTTTTATGTCTGC TERM 4059 3139498 - 3139511 + T 100 -9.5 -5.76633 | opp_overlap 3139498 3139497, overlap 3139490 AGCTTTGTAAAAAAG CCCGC GCAA GCGGG TTTTTTTATGTCTGC CKO_03369 3140460 - 3139564 - | transcriptional activator NhaR CKO_03370 3141689 - 3140523 - | pH-dependent sodium/proton antiporter TERM 4060 3140655 - 3140643 - G 73 -9.1 -3.82218 | ATCTACACTACCAAA CGCCA GAC TGGCG ATGAAAATCGACATC TERM 4061 3141824 - 3141847 + r 100 -16.8 -4.8667 | opp_overlap 3141824 CCGACAAACAAAAAA GCCCGGGATT GTGC AATCCCGGGC TTTTTATGCAATGTA TERM 4062 3141847 - 3141824 - R 100 -16.8 -5.72622 | opp_overlap 3141824 CCGACAAACAAAAAA GCCCGGGATT GTGC AATCCCGGGC TTTTTATGCAATGTA CKO_03371 3143030 - 3141873 - | chaperone protein DnaJ TERM 4063 3141900 - 3141936 + g 75 -3.5 -4.8667 | opp_overlap 3141898 3141897 3141889, overlap 3141902 3141903 ATCATCGAAAAACTT CTTCACGCCGTCGAAGA AAC TCTTCGAACGCGGGCTG TTTTTCTCGCCTGTC TERM 4064 3142925 - 3142938 + g 82 -5.2 -4.98531 | GATATTTCATGGCCA GGCG CTTGTA CGCC TTTTTGATTTCACGC TERM 4065 3143030 - 3143072 + g 100 -20.6 -4.14392 | opp_overlap 3143030, overlap 3143032 TATCTGCCCCTAACA TGCGTGCACGGGCGGAGAGG AAC CCTCTTCGCCCGTGCCAGTA TTTTACCCGTTCAAA TERM 4066 3143072 - 3143030 - G 100 -16.2 -3.01924 | opp_overlap 3143030 3143032 TATCTGCCCCTAACA TGCGTGCACGGGCGGAGAGG AAC CCTCTTCGCCCGTGCCAGTA TTTTACCCGTTCAAA TERM 4067 3143032 - 3143070 + rH 100 -21 -3.67 | opp_overlap 3143030, overlap 3143030 TCTGCCCCTAACATG CGTGCACGGGCGGAGAGG AAC CCTCTTCGCCCGTGCCAG TATTTTACCCGTTCA CKO_03373 3145010 - 3143094 - | molecular chaperone DnaK TERM 4068 3144705 - 3144733 + Gg 70 -5.2 -4.37886 | gap 1, opp_overlap 3144705 3144704 3144708, overlap 3144706 3144710 ACCTTTCACATCAAG CCATGCGTCGCCG TTAT CGGCGCCG-ATGA TTTTGTACGGCATGA CKO_03372 3143064 - 3145052 + | hypothetical protein CKO_03374 3145124 - 3145303 + | hypothetical protein CKO_03375 3145412 - 3145978 + | hypothetical protein TERM 4069 3145986 - 3146009 + T 100 -15.4 -4.62302 | CGCACTAATCTTCCG TTATCCCCCC GACC GGGGGGATAA TTTTTACAGCTGTTG CKO_03376 3147320 - 3146013 - | hypothetical protein TERM 4070 3147260 - 3147243 - G 74 -7.7 -4.15106 | gap 1 GATGAAGTCGTAAAA CTCGAGCG CGC CGC-CGAG AGCGGCAAGTGAAAG CKO_03377 3148032 - 3147445 - | molybdenum cofactor biosynthesis protein TERM 4071 3147728 - 3147746 + g 70 -6.6 -4.12532 | CTGATCTGGCGCATC TGCTCGCC AAA GCCGGGCA TTTCTCTGTCGGCGA CKO_03378 3149099 - 3148146 - | transaldolase B TERM 4072 3149444 - 3149458 + G 86 -7.1 -5.04222 | GGTAATGATCTACCT CCTGC TTGGT GCAGG TTTTTGGTTTACTTA CKO_03379 3149379 - 3150815 + | hypothetical protein TERM 4073 3150823 - 3150801 - f 74 -10.6 -3.18239 | GATACATGGGATGAA TTGCCGCG TCACTAG CGCGGCAA TCACAACCATCGATC TERM 4074 3150830 - 3150849 + F 85 -3.6 -5.52986 | gap 1, overlap 3150830 3150833 GCGCGGCAATCACAA CC-ATCGAT CAA ATCGGTCGG TTTTTTTGCTAAAGT TERM 4075 3151129 - 3151117 - g 70 -6.9 -4.07568 | opp_overlap 3151116 3151117 3151121 CTTCTCCCCTGAAAA CGCCC GCC AGGCG ATTCTGGCGTTTAAA TERM 4076 3151574 - 3151558 - g 84 -9.4 -4.22652 | overlap 3151570 TTACATCATTGAAAA CCGGCT GACGA AGCCGG AACAGCTCACCGCAT CKO_03380 3150893 - 3151669 + | hypothetical protein CKO_03381 3151799 - 3151647 - | hypothetical protein CKO_03382 3152058 - 3151768 - | hypothetical protein TERM 4077 3151796 - 3151816 + g 71 -8.3 -3.84674 | overlap 3151797 3151799 TCGTCGCGGCGATCA TCATGACGA TGC TCGTCATGC TTATTATGATGCGGT TERM 4078 3151797 - 3151815 + g 75 -11.8 -2.90322 | overlap 3151796 3151799 CGTCGCGGCGATCAT CATGACGA TGC TCGTCATG CTTATTATGATGCGG TERM 4079 3152251 - 3152223 - R 91 -7.5 -5.24129 | gap 2, opp_overlap 3152230 TTTCTCCATAAAAAA GCCGGAT--GGCG GCTAA CGCCTTATCCGGC CTACAATAGCTACAA CKO_03383 3153582 - 3152296 - | threonine synthase TERM 4080 3152359 - 3152388 + g 70 -7.1 -4.09685 | gap 1, opp_overlap 3152351 3152361, overlap 3152361 CAGATTATGCGAGAG CAGC-GGCAGATCG GCA CGATCCGCCAGCTC TTTTGGCAGATCCAA TERM 4081 3152386 - 3152361 - G 72 -11.9 -2.63913 | gap 1, opp_overlap 3152359 3152361, overlap 3152351 GATTATGCGAGAGCA GC-GGCAGATCG GCA CGATCCGCCAGC TCTTTTGGCAGATCC TERM 4082 3152361 - 3152386 + g 74 -9.7 -3.64716 | gap 1, opp_overlap 3152361 3152351, overlap 3152359 GATTATGCGAGAGCA GC-GGCAGATCG GCA CGATCCGCCAGC TCTTTTGGCAGATCC CKO_03384 3154515 - 3153586 - | homoserine kinase CKO_03385 3156979 - 3154517 - | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 4083 3155195 - 3155239 + g 91 -3.5 -5.45652 | opp_overlap 3155202 3155206, overlap 3155197 TCGGGATTTCGCCGC GGCAAAACGCAGTTGATGG TAGTAAT CCATCGACGACGTGTTGGC TTTTTTGTTCGGCGT TERM 4084 3156748 - 3156706 - G 73 -6.3 -4.4078 | CTTGTTCAACGAAAA CTTTCAACTGCGCCAGC-GGG AAC CCCGGCTGA-GCGGCTGCAAG ACCCGTAAGAAGTTC TERM 4085 3157014 - 3157036 + r 100 -12.7 -5.51046 | opp_overlap 3157014 TTGGTCGAAAAAAAA GCCCGCACT GTTCA GGTGCGGGC TTTTTTCTGTGTTTC TERM 4086 3157036 - 3157014 - R 100 -12 -5.75342 | opp_overlap 3157014 TTGGTCGAAAAAAAA GCCCGCAC TGTTCAG GTGCGGGC TTTTTTCTGTGTTTC TERM 4087 3157065 - 3157095 + r 77 -10.4 -3.45023 | TCCTGTACGCGTCAG CCCGCACCGTTACC TGT GGTAATGGTGATGG TTGTGGTAATGGTGG TERM 4088 3157327 - 3157351 + r 71 -3.7 -4.89852 | overlap 3157329 TCTTACATTAAGTAA TTTAACAAGAT TTT ATTTTGTTATA TTTTTCTCAATATCA CKO_03386 3158025 - 3157339 - | putative RNA methyltransferase CKO_03387 3158660 - 3159376 + | two-component response regulator TERM 4089 3159400 - 3159416 + GT 100 -10.8 -5.62045 | opp_overlap 3159400 CACCGGCAGCAAAAA CGGCGC AAAAC GCGCCG TTTTTTATTGTCTGT TERM 4090 3159416 - 3159400 - gT 100 -11.5 -4.72986 | opp_overlap 3159400 CACCGGCAGCAAAAA CGGCGCA AAA CGCGCCG TTTTTTATTGTCTGT CKO_03389 3159970 - 3159485 - | hypothetical protein CKO_03388 3159360 - 3159557 + | hypothetical protein TERM 4091 3159634 - 3159597 - Gf 75 -4.1 -4.91109 | gap 1 TTGGCATCATAAAAA CGCACGAC-CTGTAATTT TTT AAACACCAGCGACGTGCG CTTCTGGAAAACGAC CKO_03390 3160167 - 3161036 + | hypothetical protein CKO_03391 3161680 - 3161033 - | phosphoglycerate mutase TERM 4092 3161363 - 3161375 + g 73 -9.1 -3.90645 | opp_overlap 3161363 CGTGCCATTCACTAA CTGGC GAC GCCAG TTCTCTTCTTCTTCG TERM 4093 3161898 - 3161883 - g 71 -8.2 -3.794 | TTGGAAGTCAGGAAA CGCGCG CTGG CGCACG GAATCGGGTAGAAAA CKO_03392 3161732 - 3162247 + | NTPase CKO_03393 3162738 - 3162439 - | Trp operon repressor TERM 4094 3162727 - 3162706 - G 80 -8.7 -4.18934 | opp_overlap 3162706 3162704 GAGCAGCTCAACAAA GCGTAACCA CTCC TGGTGACGC TGTTCTGCCATCGCT CKO_03394 3164796 - 3162859 - | lytic murein transglycosylase CKO_03395 3164963 - 3166678 + | putative ABC transporter ATP-binding protein CKO_03396 3167999 - 3166767 - | nicotinamide-nucleotide adenylyltransferase CKO_03397 3168144 - 3167878 - | hypothetical protein CKO_03398 3169375 - 3168125 - | DNA repair protein RadA TERM 4095 3168448 - 3168500 + g 71 -4.8 -4.63218 | ATACATCCTGATCGG CCATCTG-CAATCCGCCATGACGGTG CAG CACCGCCA-GCAGGATCGCCAGACGG TTTTGTTCCAGGCCG CKO_03399 3169421 - 3169600 + | hypothetical protein CKO_03400 3170629 - 3169625 - | phosphoserine phosphatase TERM 4096 3170875 - 3170852 - g 74 -9.5 -3.63515 | CCGCAGCTCGAAGAA CTGGCCCGC ACGCTG GCGCGCCAG GTGACCTTAAATATC TERM 4097 3171132 - 3171118 - g 73 -5.6 -4.62783 | opp_overlap 3171120, overlap 3171120 TATTCAGGGTAAAAA TGGCCC GCT GGGCTA TCTGCGCCTGACGCT CKO_03401 3170711 - 3171358 + | hypothetical protein TERM 4098 3171499 - 3171512 + G 76 -5.2 -4.75472 | TTTTCGCCAGATGCC CGCG ACACAG CGCG TTTTGTTCCTGTGGC TERM 4099 3171806 - 3171795 - g 74 -7.2 -4.07687 | overlap 3171796 ATCTGGTGGTGAAAA CGCC GGAA GGCG ACCGCAAGGTTTCCG CKO_03402 3171413 - 3172429 + | lipoate-protein ligase A CKO_03403 3172828 - 3173526 + | hypothetical protein TERM 4100 3173559 - 3173582 + F 74 -6 -4.62069 | opp_overlap 3173559 ATATCTGTACAACAA CTCCCTAC ATGGATGG GTGGGGAG TTTTTCCAATAGAAG TERM 4101 3173743 - 3173733 - g 70 -6.8 -4.20516 | TGGTTATTGAAGAAA GCCA TAA TGGC GGAACGATAAATGTC TERM 4102 3173836 - 3173813 - g 77 -7.4 -4.31043 | overlap 3173815 ATAGAAGATGTAAAA GATGACAGTG GCAT CACCGTCAAC GTCACCCAGCCCGTC CKO_03404 3173567 - 3174319 + | putative periplasmic chaperone protein TERM 4103 3174500 - 3174514 + G 76 -2.7 -5.02476 | opp_overlap 3174497 TATCGCAAATTACTT CGCAG AAGAG CCGCG TTTTTTGCCCGGTGT TERM 4104 3174816 - 3174796 - g 71 -10.4 -3.22077 | gap 1, opp_overlap 3174812, overlap 3174794 3174792 GGGAGAAAAACTATA GCCACGGCG GCAG CGCCG-GGC TGCTCAACTACAGCC TERM 4105 3175040 - 3175058 + G 73 -5.9 -4.37886 | opp_overlap 3175042, overlap 3175032 CCAGGTTGGGCAGAT CAGCTCC AGATC GGCGCTG TTTTCTGGAACATCC TERM 4106 3175554 - 3175539 - g 74 -7.6 -4.14056 | opp_overlap 3175538 AGTTCAAACGAGAAA TGGCAA GTAT TTGCCA GTCTGCTGGGCAGCC CKO_03405 3174351 - 3176771 + | hypothetical protein CKO_03406 3176768 - 3177334 + | hypothetical protein TERM 4107 3177384 - 3177370 - T 91 -11.4 -4.20932 | AACAGGCAGGGAAAA GGGGCA AAC TGCCCC TTCAGAGTGCTGACA TERM 4108 3177501 - 3177523 + T 91 -7.6 -5.1361 | opp_overlap 3177489, overlap 3177504 3177505 GAAGCGCCATCAGGC GTAAGGGGCA AAG TGCCCCCTTC TTTTTTACGCTTTAT TERM 4109 3177504 - 3177520 + T 82 -7.9 -4.63993 | overlap 3177501 3177505 GCGCCATCAGGCGTA AGGGGCA AAG TGCCCCC TTCTTTTTTACGCTT TERM 4110 3177505 - 3177519 + T 79 -11.4 -3.36769 | overlap 3177504 3177501 CGCCATCAGGCGTAA GGGGCA AAG TGCCCC CTTCTTTTTTACGCT CKO_03407 3178247 - 3177528 - | purine nucleoside phosphorylase CKO_03408 3179582 - 3178347 - | phosphopentomutase TERM 4111 3178744 - 3178754 + g 79 -3.2 -5.1861 | AGCGCGTCCAGGCCA GTGG CTT TCAC TTTTTTGGTGATGCC TERM 4112 3179175 - 3179205 + g 77 -7.7 -4.3129 | gap 2 GTTGGCGCGTTTTAC CAGCTTATCCAGCAG TTC CTGC-GGG-AAGCTG TTTTCGTGGTCGCTG TERM 4113 3179443 - 3179462 + g 70 -10 -3.34962 | gap 1 TTACGGCCATTGTCG GCCT-CGCC CCT GGCGCAGGC TTCTGCAATATGGCC CKO_03409 3180978 - 3179623 - | thymidine phosphorylase TERM 4114 3179671 - 3179700 + g 74 -10.7 -3.58037 | overlap 3179666 3179696 AATTTCAGGCGCTTT GTCGTCAAGGCTG ATTG CCGCTTTGACGGC TTTCGCCGCTTCCTG CKO_03410 3181878 - 3181081 - | deoxyribose-phosphate aldolase CKO_03411 3182013 - 3183710 + | hypothetical protein TERM 4115 3183746 - 3183712 - f 100 -18.7 -3.4052 | overlap 3183713 CGGCAAGCGAATGAA TCCCCAGTCACGTAC ACGTA GTACGTGACTGGGGT GAATAAGTGCAGCCA TERM 4116 3183745 - 3183713 - f 100 -22.2 -2.63991 | overlap 3183712 GGCAAGCGAATGAAT CCCCAGTCACGTAC ACGTA GTACGTGACTGGGG TGAATAAGTGCAGCC TERM 4117 3184249 - 3184271 + G 71 -7.6 -3.96148 | opp_overlap 3184248 3184249 TCTGTTGAGCGAAAC CGGCTGGCAG AAA CTGCTGCCCG TTTGTGATGGCGCGA TERM 4118 3184565 - 3184539 - g 100 -10 -4.86621 | ATGGCGAAGCAAAAA CGTGGCCGGGCG CAA CGCCTGACGACG TGCAACAGCTGGCAA CKO_03412 3183782 - 3184636 + | hypothetical protein CKO_03413 3185539 - 3184763 - | putative deoxyribonuclease YjjV TERM 4119 3184861 - 3184877 + g 79 -11.5 -3.65351 | TGCTGAATACCCGTG CCGCCTG TTC CGGGCGG TTTGGCTGCCCCTGA CKO_03414 3186537 - 3185536 - | hypothetical protein TERM 4120 3186699 - 3186681 - R 100 -14.6 -4.28049 | opp_overlap 3186685 GCTAAAACCGTAAAA GCCAGTCC GAT GGACTGGC TTAGCATGAATCATG CKO_03415 3186954 - 3186733 - | hypothetical protein CKO_03416 3187640 - 3187023 - | periplasmic protein TERM 4121 3187960 - 3187935 - R 95 -14.7 -3.54676 | overlap 3187931 AGGCAGGGAAAGTAA CAGGGCGCGCC GGAT GACACGCCCTG GAGGGACAATTAGTG CKO_03417 3189559 - 3187970 - | peptide chain release factor 3 TERM 4122 3189055 - 3189069 + g 70 -7.1 -4.17425 | opp_overlap 3189043, overlap 3189065 CAATCGGCCAGGTGA TCGGC GCACA GCCGA TTTTCAGCTCGTTCT CKO_03418 3190332 - 3189652 - | nucleotidase CKO_03419 3190790 - 3190344 - | ribosomal-protein-alanine N-acetyltransferase CKO_03421 3191277 - 3190759 - | DNA polymerase III subunit psi TERM 4123 3191200 - 3191180 - GH 72 -8.2 -3.71378 | GATGTCATAGCGAAA CGCTCCTG TCTGT CAGGGGCG CAAATATAGCAAATT CKO_03420 3191276 - 3192304 + | 16S ribosomal RNA m2G1207 methyltransferase CKO_03423 3192420 - 3192310 - | hypothetical protein CKO_03422 3192329 - 3192445 + | hypothetical protein CKO_03427 3193145 - 3192870 - | hypothetical protein CKO_03428 3193359 - 3194426 + | hypothetical protein TERM 4124 3195148 - 3195190 + G 77 -11.3 -3.61398 | gap 1, opp_overlap 3195146 3195147 3195142, overlap 3195186 GACCGAAATGAAACC GCTGCT-TGGCGAAGCCTTG CTGG CAACGCTGCGCCAGAGCTGC TTCTTCGAAAAGCAA CKO_03429 3194549 - 3195337 + | ferric iron reductase involved in ferric hydroximate transport TERM 4125 3195362 - 3195335 - T 100 -15 -3.57462 | opp_overlap 3195342, overlap 3195339 GACTGTACGCTGAAA TAAACAAGGCGC CGCT GCGCCTTGTTCA ACACGTCAGGCCATC TERM 4126 3195358 - 3195339 - T 100 -13.6 -4.42806 | opp_overlap 3195342, overlap 3195335 GTACGCTGAAATAAA CAAGGCGC CGCT GCGCCTTG TTCAACACGTCAGGC TERM 4127 3195342 - 3195355 + T 75 -9.5 -3.62046 | opp_overlap 3195339 3195335 CGCTGAAATAAACAA GGCGC CGCT GCGCC TTGTTCAACACGTCA CKO_03430 3196615 - 3195368 - | hypothetical protein TERM 4128 3196282 - 3196302 + g 83 -9.7 -4.07568 | overlap 3196286 TTCCGCCCAGGCTGT CAACCGGCA TAG TGCCGTTTG TTTTCGGCGCGGCAA TERM 4129 3196286 - 3196298 + g 89 -9.1 -4.64861 | overlap 3196282 GCCCAGGCTGTCAAC CGGCA TAG TGCCG TTTGTTTTCGGCGCG TERM 4130 3196590 - 3196580 - G 77 -8.2 -4.1021 | GCCGACAATCATAAA CGGC ATT GCCG AAATGAAACCATCAC CKO_03431 3196965 - 3196780 - | hypothetical protein TERM 4131 3196912 - 3196928 + g 76 -10.9 -3.67792 | overlap 3196901 CCCGCCGGACTGCAA CCGGTTA CTG TAACCGG TTTCCGTGAATGTGA CKO_03432 3197075 - 3197533 + | hypothetical protein CKO_03433 3198215 - 3197598 - | DNA-binding transcriptional activator BglJ CKO_03434 3198949 - 3198227 - | hypothetical protein TERM 4132 3199391 - 3199401 + H 74 -6.8 -4.20707 | AGCGACTGATTGTCT GGCA TCC TGCC TCTTTTTTCATCACA CKO_03435 3199420 - 3200295 + | hypothetical protein CKO_03436 3200286 - 3200759 + | hypothetical protein TERM 4133 3200777 - 3200813 + F 87 -14.6 -2.91239 | gap 1 CTTTTCTCCCTGCGC TCAGGCAGGGTGAGG CCGCTTTC CCTCACCCTGCC-GA TATCTCCCGTCTGTG TERM 4134 3200973 - 3201006 + G 70 -5.1 -4.4009 | opp_overlap 3200946 3200997, overlap 3200969 AAAATCGGCAAGCGG CGCGGTGGCGGTCTT CGCC AATAACGCGCCCGCG TTTTATGCCGTGACG CKO_03437 3200884 - 3201423 + | primosomal protein I CKO_03438 3201426 - 3202163 + | DNA replication protein DnaC TERM 4135 3202249 - 3202274 + G 76 -9.7 -3.85698 | gap 1, opp_overlap 3202235, overlap 3202250 CCACAAAACGTCTTC TGTGCTGCGCGG TTG CCGC-CAGCGCG TTTATCGCCACCAGC TERM 4136 3202250 - 3202273 + G 71 -11 -2.91276 | gap 1, opp_overlap 3202235, overlap 3202249 CACAAAACGTCTTCT GTGCTGCGCGG TTG CCGC-CAGCGC GTTTATCGCCACCAG TERM 4137 3202373 - 3202351 - g 79 -7.6 -4.5123 | opp_overlap 3202369 3202370 AACTGAGCAAACAAA GCAGCTCTTC ACA GCAGAGCGGC ATGTCGCTGTCTTCT TERM 4138 3202527 - 3202517 - g 81 -6.8 -4.7416 | GGAAAACGTTAAAAA CCAG GTG CTGG ATAAACTGGGACTTG CKO_03439 3202227 - 3202718 + | hypothetical protein TERM 4139 3203048 - 3203063 + G 70 -6.8 -4.12902 | overlap 3203058 GCGGGTCGCAACACC TGGTGG TTTG CCGCCA TTTTAGCGGTACTTG CKO_03440 3202973 - 3205264 + | phosphoglycerol transferase I TERM 4140 3205512 - 3205530 + G 79 -3 -5.14563 | overlap 3205519 GCTGGCTGGCGCTGG CCGATGAG CGT CCTGTCGG TTTTTTACTGGCCGA CKO_03441 3205331 - 3205846 + | hypothetical protein CKO_03442 3207747 - 3206083 - | hypothetical protein TERM 4141 3206749 - 3206782 + g 80 -12.3 -3.34501 | overlap 3206777 CTGCGCGGTTTCAGA CGCGCTCAATGCCAG ATGG CTGGCCTGGCGCGCG TTCTCGGCGTTCTGT TERM 4142 3207395 - 3207438 + g 87 -8 -4.58685 | gap 1, overlap 3207397 ACTGCCGCCGTTTCA CTCTGGCGCGGATCGCGAGGC AAC GCCTCGTACTCAGC-CCAGTG TTTTTCCGCCAGTTT TERM 4143 3207397 - 3207436 + g 73 -9.2 -3.90316 | gap 1, overlap 3207395 TGCCGCCGTTTCACT CTGGCGCGGATCGCGAGGC AAC GCCTCGTACTCAGC-CCAG TGTTTTTCCGCCAGT TERM 4144 3208607 - 3208579 - g 85 -11 -4.03811 | gap 1, opp_overlap 3208578 3208584 3208594, overlap 3208581 GAGATGATCAAAGAA GAGATGG-GCCCG GTGC CGGGCACCATCGC CCTGTTTGGCTGCTT TERM 4145 3208605 - 3208581 - g 81 -12.2 -3.60323 | gap 1, opp_overlap 3208578 3208584 3208594, overlap 3208579 GATGATCAAAGAAGA GATGG-GCCCG GTGC CGGGCACCATC GCCCTGTTTGGCTGC CKO_03443 3208114 - 3210264 + | hypothetical protein TERM 4146 3210357 - 3210372 + G 81 -8.2 -4.31293 | opp_overlap 3210352 3210357 3210356 3210353 TCCGGCAAAACCAAC GCCCGG TTCG CTGGGC TTTATTCATATCTGG CKO_03444 3210276 - 3210599 + | hypothetical protein CKO_03445 3210599 - 3211567 + | putative GTP-binding protein YjiA CKO_03446 3212741 - 3211677 - | hypothetical protein CKO_03447 3213798 - 3212731 - | hypothetical protein CKO_03448 3214269 - 3213811 - | hypothetical protein TERM 4147 3214399 - 3214376 - R 100 -12.4 -5.15969 | opp_overlap 3214376 3214393, overlap 3214390 CGTGAATGTAAAAAA GGCCGGACTG AATA CAGCCCAGCC TCTGTGGTGTTACGG CKO_03449 3214637 - 3214419 - | hypothetical protein TERM 4148 3214487 - 3214513 + g 76 -2.9 -5.1356 | gap 1, opp_overlap 3214486, overlap 3214489 3214489 TGCGTTGCAATACAC GCT-GCGTCTGC GCCC GCAGTCGCCATC TTTTTATTGCTCGCC CKO_03450 3214761 - 3216173 + | hypothetical protein CKO_03452 3217143 - 3216229 - | hypothetical protein TERM 4149 3217119 - 3217107 - Gf 80 -9.1 -4.10855 | opp_overlap 3217118 AAAACGTTTTGAAAA CCGCA TCA TGCGG AGTGGATGTCGTTCC TERM 4150 3217118 - 3217134 + gF 79 -2.9 -5.14965 | opp_overlap 3217107 AAAACCGCATCATGC GGAGTGG ATG TCGTTCC TTTTTTCATGGCAAT CKO_03451 3217121 - 3217408 + | hypothetical protein TERM 4151 3217935 - 3217947 + G 76 -10.5 -3.66356 | opp_overlap 3217925 3217934 3217933 AGAGACGGTACAACG CGGCG CAG CGCCG TTTAGCATTCCCGCT CKO_03453 3217399 - 3218586 + | hypothetical protein TERM 4152 3218625 - 3218649 + T 100 -18.6 -5.02074 | opp_overlap 3218628 TTATCTGCGCCGACA GCAGGCCCCG CTATA CGGGGCCTGC TTTTTTAAGCGATAC TERM 4153 3218646 - 3218628 - T 83 -13.8 -2.62184 | opp_overlap 3218625 TCTGCGCCGACAGCA GGCCCCGC TAT ACGGGGCC TGCTTTTTTAAGCGA CKO_03454 3219844 - 3218654 - | hypothetical protein CKO_03455 3221114 - 3219864 - | hypothetical protein CKO_03456 3221341 - 3222267 + | hypothetical protein TERM 4154 3223379 - 3223397 + G 71 -8 -3.85698 | opp_overlap 3223364 GGCTGCGCACCGGGT CGCGCCGG AGT TCGCCGCG TTTCTGACGCGCCAC CKO_03457 3222264 - 3223589 + | hypothetical protein TERM 4155 3224023 - 3224012 - g 79 -3 -5.27023 | ACGGCAAAAAGAAAA TGTA CGAA TACA TGGCCGAATTTAAGG CKO_03458 3223672 - 3224823 + | hypothetical protein TERM 4156 3225201 - 3225215 + G 75 -7 -4.3898 | opp_overlap 3225197 GAATGATAAATGTGC CGCCGG AAC CGGGCG TTTTCTGGAGGTGAT CKO_03459 3224833 - 3225600 + | hypothetical protein TERM 4157 3225601 - 3225611 + G 84 -3.2 -5.38326 | AGAAAACGCGGATGA CGGA ATA TCTG TTTTTATTTCATTCG CKO_03460 3225597 - 3225848 + | hypothetical protein TERM 4158 3226398 - 3226413 + G 76 -11.8 -3.12895 | overlap 3226397 TTGCGTCGCTTTTCT CCGGCG TTGG CGCCGG TATCTTGCTGGGCAA CKO_03461 3225965 - 3227155 + | hypothetical protein CKO_03462 3227316 - 3227110 - | hypothetical protein TERM 4159 3227229 - 3227245 + g 80 -5.1 -4.87665 | overlap 3227232 GTTTACCCCTGCGCT TAACCGT GAT ACGGTCA TTTTTATGAATAAAC TERM 4160 3227341 - 3227360 + H 86 -13.6 -3.17075 | opp_overlap 3227341, overlap 3227347 TTATCCCCGTATTAA TAGCCGCC GAAA GGCGGCTA TTGCGTTCCAGAGAC TERM 4161 3227360 - 3227341 - H 86 -13.6 -3.14564 | opp_overlap 3227341 3227347 TTATCCCCGTATTAA TAGCCGCC GAAA GGCGGCTA TTGCGTTCCAGAGAC TERM 4162 3227347 - 3227384 + H 100 -9.1 -5.0538 | opp_overlap 3227341, overlap 3227341 CCGTATTAATAGCCG CCGAAAGGCGGCTATTG CGTT CCAGAGACGTCTTTCGG TTTTTTCACGTAAAG CKO_03463 3227409 - 3228416 + | tryptophanyl-tRNA synthetase II CKO_03464 3228440 - 3228568 + | hypothetical protein TERM 4163 3228665 - 3228697 + T 100 -12.7 -4.5538 | opp_overlap 3228665 3228664 3228668, overlap 3228666 3228669 3228670 CTTCCGGGTGTAAAT CCAGGCAGGCCTGTC AGC GACAGGCCTGATTGC TTTTGTGAGTTTTAT TERM 4164 3228697 - 3228665 - T 71 -10.5 -2.71712 | opp_overlap 3228665 3228666 3228669 3228670, overlap 3228664 3228668 CTTCCGGGTGTAAAT CCAGGCAGGCCTGTC AGC GACAGGCCTGATTGC TTTTGTGAGTTTTAT TERM 4165 3228666 - 3228696 + T 100 -16.2 -3.31601 | opp_overlap 3228665 3228664 3228668, overlap 3228665 3228669 3228670 TTCCGGGTGTAAATC CAGGCAGGCCTGTC AGC GACAGGCCTGATTG CTTTTGTGAGTTTTA TERM 4166 3228694 - 3228668 - T 71 -10.8 -2.64155 | opp_overlap 3228666 3228665 3228669 3228670, overlap 3228665 3228664 CCGGGTGTAAATCCA GGCAGGCCTGTC AGC GACAGGCCTGAT TGCTTTTGTGAGTTT TERM 4167 3228669 - 3228693 + T 100 -14.3 -3.76789 | opp_overlap 3228668 3228665 3228664, overlap 3228666 3228665 3228670 CGGGTGTAAATCCAG GCAGGCCTGTC AGC GACAGGCCTGA TTGCTTTTGTGAGTT TERM 4168 3228670 - 3228692 + T 100 -17.8 -2.84989 | opp_overlap 3228668 3228665 3228664, overlap 3228669 3228666 3228665 GGGTGTAAATCCAGG CAGGCCTGTC AGC GACAGGCCTG ATTGCTTTTGTGAGT CKO_03465 3228812 - 3228678 - | hypothetical protein TERM 4169 3228716 - 3228728 + g 71 -4.8 -4.63218 | TGTGAGTTTTATTCT TGCG CAGTC CGCA TTTTCTTAACACCAC CKO_03466 3230086 - 3228824 - | hypothetical protein TERM 4170 3230181 - 3230162 - R 100 -12.2 -5.84011 | AATAAAAAACAAAAA GCCCCATT TAAA AATGGGGC TATCAATACCATTAA CKO_03467 3231590 - 3230193 - | tyrosine phenol-lyase CKO_03468 3232343 - 3233443 + | hypothetical protein TERM 4171 3234546 - 3234531 - g 73 -5.4 -4.59773 | TGCTAGCGGTAAAAA CGACCT GTAA AGATCG CTGGCGGCAGATATT CKO_03469 3233564 - 3234766 + | hypothetical protein TERM 4172 3234784 - 3234806 + T 77 -10.5 -3.44851 | overlap 3234782 3234785 AATTTGATTCTGTTT CCCCCCGGA TAAAT TCCGGGGGA TCTGTTTATATTATT TERM 4173 3234785 - 3234805 + T 83 -14 -2.65284 | overlap 3234784 3234782 ATTTGATTCTGTTTC CCCCCGGA TAAAT TCCGGGGG ATCTGTTTATATTAT CKO_03470 3236241 - 3234817 - | DNA cytosine methylase TERM 4174 3235281 - 3235295 + gT 83 -8.6 -4.38712 | CAGGGTCCAGAAGCT GACCAA ATG TTGGTC TTTTCTCAGGGTAGA CKO_03471 3236282 - 3236154 - | hypothetical protein TERM 4175 3236517 - 3236483 - R 73 -11 -2.5409 | gap 1, opp_overlap 3236483, overlap 3236473 ACAACCGGTAATTTA GCCATCTTATC-CTA AAGAAA TAGCGATAAGATGGC TTATATAATCGCCGC TERM 4176 3236483 - 3236517 + r 82 -11 -3.54475 | gap 1, opp_overlap 3236473 3236483 ACAACCGGTAATTTA GCCATCTTATC-CTA AAGAAA TAGCGATAAGATGGC TTATATAATCGCCGC CKO_03472 3240049 - 3236534 - | hypothetical protein TERM 4177 3238593 - 3238612 + g 84 -2.9 -5.29445 | gap 1, overlap 3238593 3238594 3238596 TTCCATTCCGCTTTA G-CACTCT TCAGT AGAGTGAC TTTTTGTTCTTGCCC TERM 4178 3239412 - 3239400 - G 70 -9.1 -3.75229 | opp_overlap 3239402 3239404 GAAAGGATATGGAAA CTGGC GCC GCCAG ATTGCGCCGTTTTAA TERM 4179 3239849 - 3239875 + g 75 -3.7 -4.87665 | opp_overlap 3239856 AACCTTTGGCCGCAA GATGATATCGA CTGTT TCGACGTCGTC TTTTTCTCCCTCAAA CKO_03473 3241145 - 3240366 - | hypothetical protein CKO_03474 3241614 - 3241261 - | hypothetical protein TERM 4180 3241339 - 3241322 - G 70 -5.5 -4.52589 | overlap 3241324 TGCCCCCACACAAAA TCCGCCA GGAG TGGCTGA CGCTGGACGAGGCCG TERM 4181 3241766 - 3241789 + G 77 -7.4 -4.26076 | GCTACTACCAACTCT GTTGCCGCAA ATCG TTGCGGGAGC TTTTACTGGAACTAC TERM 4182 3242183 - 3242168 - g 77 -8.2 -4.13014 | CCGAGACGTTGAAAA CCGCAC TCCA GCGCGG CGCACCGTCGTAACG CKO_03475 3241624 - 3242196 + | hypothetical protein TERM 4183 3242516 - 3242477 - g 95 -15.1 -3.53012 | gap 1, opp_overlap 3242471, overlap 3242453 TCGCCTGGCTGGAAA GCGAGGTGGATGC-CTGG ATCCA CCAGCGCATCCGCCTCAC CCGCGATGTCTGAAT CKO_03476 3242329 - 3242529 + | hypothetical protein CKO_03477 3242397 - 3242612 + | hypothetical protein CKO_03478 3242762 - 3243397 + | hypothetical protein TERM 4184 3243613 - 3243633 + G 70 -3.1 -4.78848 | overlap 3243615 AAGGACGGCCACAAA CTCTACCGC AGC GCGCTGGCG TTTTATCTTTCCGCC TERM 4185 3244038 - 3244057 + G 83 -6.3 -4.91109 | opp_overlap 3244037 AATCGCGCAACTGAT GGCGCTG CATCGC CCGCGCC TTTTTATCGTCGAGG CKO_03479 3243394 - 3244317 + | hypothetical protein CKO_03480 3244501 - 3245187 + | hypothetical protein TERM 4186 3245635 - 3245621 - g 72 -2.2 -4.98436 | TCAACACCAGAAAAA TAAAAA CCA TTTTCA ATCGTTCACTGGCGA CKO_03481 3245368 - 3246063 + | hypothetical protein CKO_03482 3246227 - 3246682 + | hypothetical protein TERM 4187 3247007 - 3246985 - f 100 -17.8 -3.3941 | opp_overlap 3246985 ACGAGACGCAATTAA TGCCACCTGC TAT GCAGGTGGCA TTTACTGGGCTAGAT TERM 4188 3246985 - 3247007 + F 100 -17.8 -3.74872 | opp_overlap 3246985 ACGAGACGCAATTAA TGCCACCTGC TAT GCAGGTGGCA TTTACTGGGCTAGAT TERM 4189 3247833 - 3247809 - g 89 -2.8 -5.59564 | overlap 3247812 3247830 ATAAAGGTAAAAAAA TGAGTCTTGT CGACT ACAGGACGCA TGAATACGCTTTGGC CKO_03483 3247112 - 3247927 + | hypothetical protein CKO_03484 3248607 - 3248071 - | hypothetical protein CKO_03485 3249358 - 3248591 - | hypothetical protein CKO_03486 3249611 - 3249411 - | hypothetical protein CKO_03488 3249879 - 3249697 - | hypothetical protein CKO_03487 3249802 - 3250482 + | hypothetical protein TERM 4190 3251174 - 3251194 + G 78 -13.3 -2.63257 | overlap 3251170 CAGCACCGGTTCCGT CTCTGGCAG TGA CTGCCAGGG TGAGTTATGTCAGGT TERM 4191 3251349 - 3251317 - g 76 -9.8 -3.79747 | gap 1, opp_overlap 3251329 3251330, overlap 3251328 GCACTGACCAGCAAA GCGGCGCACAATCCG GCGT CGGGCTG-ACGCCGC TTATTCAGGAAGAAA TERM 4192 3251330 - 3251348 + G 72 -12.4 -2.76696 | opp_overlap 3251317 3251328, overlap 3251329 AAGCGGCGCACAATC CGGCGTCG GGC TGACGCCG CTTATTCAGGAAGAA TERM 4193 3251376 - 3251366 - g 76 -5.4 -4.72497 | overlap 3251375 TATTCAGGAAGAAAA GGAT AAG ATCC AGCCGCTGATTATCG CKO_03489 3250485 - 3251852 + | hypothetical protein CKO_03490 3251849 - 3252106 + | hypothetical protein TERM 4194 3252560 - 3252578 + G 100 -13.2 -4.13767 | CCCTGCCCTGCCAGC CGGATCTG CGT CAGATCCG TTTTGAGGTGCAGCA CKO_03491 3252103 - 3252726 + | hypothetical protein CKO_03492 3253015 - 3253584 + | hypothetical protein TERM 4195 3254120 - 3254106 - g 70 -2.8 -4.76075 | opp_overlap 3254106 ACTATATTAAGAAAA TGGC CTATACC GCCA ATTCATTTAGTTAAA CKO_03493 3253959 - 3255143 + | hypothetical protein TERM 4196 3255639 - 3255629 - g 77 -4 -5.06052 | GCAAAAAATATAAAA GAAT AGT ATTC AGAGAGATCACTGGA CKO_03494 3255145 - 3256773 + | hypothetical protein TERM 4197 3256784 - 3256759 - T 100 -16.3 -3.71873 | opp_overlap 3256759 TCATTCATAGCTAAA GTAACCGCAGA ATAA TCTGCGGTTAC TTTGTTAAAGAGATG TERM 4198 3256759 - 3256784 + T 100 -16.3 -4.1552 | opp_overlap 3256759 TCATTCATAGCTAAA GTAACCGCAGA ATAA TCTGCGGTTAC TTTGTTAAAGAGATG CKO_03495 3257136 - 3256789 - | hypothetical protein TERM 4199 3257047 - 3257035 - G 70 -3.4 -4.79756 | overlap 3257027 TACAGAACGGAAAAA TGCT ATCCG AGCA GAAATATTTGGATTA CKO_03496 3259133 - 3257136 - | hypothetical protein CKO_03497 3260764 - 3259130 - | hypothetical protein TERM 4200 3260042 - 3260022 - G 71 -7.5 -3.96291 | opp_overlap 3260035 TACAAAGTCCATAAA GGAAGGTTG TTC CCACCTCCC CAAGGTGTTTCCCAT CKO_03498 3261846 - 3260761 - | hypothetical protein TERM 4201 3262148 - 3262184 + H 73 -7.8 -4.18119 | overlap 3262150 3262157 CTGATACATCCTCTA CCCCACCATGCAGGGA ATCCC TCCCTGCCGGGCGGTG TTTCTCTGCTTTCAT TERM 4202 3262150 - 3262182 + H 76 -9 -3.67724 | overlap 3262148 3262157 GATACATCCTCTACC CCACCATGCAGGGA ATCCC TCCCTGCCGGGCGG TGTTTCTCTGCTTTC TERM 4203 3262157 - 3262193 + H 76 -9.4 -3.76224 | gap 1, overlap 3262150 3262148 CCTCTACCCCACCAT GCAGGGAATC-CCTCCC TGCC GGGCGGTGTTTCTCTGC TTTCATCACTGGAGA CKO_03499 3262594 - 3263190 + | hypothetical protein TERM 4204 3263458 - 3263447 - g 86 -3.6 -5.32882 | CAGCAGGACAAAAAA GCGA TTTT CCGC GCCAGCGGGTTAGCG CKO_03500 3263177 - 3263533 + | hypothetical protein TERM 4205 3263546 - 3263569 + G 100 -14.6 -4.91712 | opp_overlap 3263546 TGACCTTCATATCAA CGGCGGAGCA TCCC TGCTCTGCCG TTTTTCTCCATTCCA TERM 4206 3263569 - 3263546 - g 78 -12.4 -3.26471 | opp_overlap 3263546 TGACCTTCATATCAA CGGCGGAGCA TCCC TGCTCTGCCG TTTTTCTCCATTCCA TERM 4207 3264009 - 3264032 + G 88 -11 -4.07746 | CCTTGAAGCCGCCTG CTATGCCGCA CGGC TGCGGCAGAG TTATCTTTTTCCACC TERM 4208 3264164 - 3264180 + G 70 -9.4 -3.6608 | overlap 3264176 TTGAGGTGGAGGACG CCAGCG GGCAA CGCTGG TTTCCGTGGCATGGT CKO_03501 3263530 - 3264792 + | hypothetical protein CKO_03502 3264958 - 3265317 + | hypothetical protein CKO_03503 3265443 - 3265901 + | hypothetical protein CKO_03504 3265938 - 3266234 + | hypothetical protein CKO_03505 3266334 - 3266209 - | hypothetical protein TERM 4209 3266301 - 3266288 - G 100 -5.2 -6.02919 | opp_overlap 3266288 TTATAAACAAAAAAA GCCG GAGATG CGGC CATTTTGTAGTTGCC CKO_03506 3267469 - 3267251 - | hypothetical protein TERM 4210 3267622 - 3267642 + r 70 -9.8 -2.94938 | opp_overlap 3267622 3267626, overlap 3267615 3267614 3267626 GGTGTAGTTGTAATA GAAAGGAC ATAAA GTCCTTTC TCTGTACACTTTTGG TERM 4211 3267642 - 3267622 - R 70 -9.8 -3.04144 | opp_overlap 3267615 3267614 3267622 3267626, overlap 3267626 GGTGTAGTTGTAATA GAAAGGAC ATAAA GTCCTTTC TCTGTACACTTTTGG TERM 4212 3267695 - 3267662 - R 85 -12.7 -3.29829 | overlap 3267664 TACACTTTTGGATAA TATCACTTGGATCTT TATA AAGATCCAAATGACA GTGCATATCAAGCTT TERM 4213 3267693 - 3267664 - R 83 -13.1 -3.21593 | overlap 3267662 CACTTTTGGATAATA TCACTTGGATCTT TATA AAGATCCAAATGA CAGTGCATATCAAGC CKO_03507 3269050 - 3267710 - | hypothetical protein CKO_03508 3269505 - 3269050 - | hypothetical protein CKO_03509 3271580 - 3269805 - | hypothetical protein CKO_03510 3272073 - 3271819 - | hypothetical protein CKO_03511 3273345 - 3272233 - | hypothetical protein CKO_03512 3274726 - 3273338 - | hypothetical protein CKO_03513 3275004 - 3274726 - | hypothetical protein TERM 4214 3275036 - 3275051 + H 73 -4.6 -4.8048 | opp_overlap 3275037, overlap 3275037 TAATCACAATCAGCA ACCGCT TTAA AGCGGA TTTTTCCTATGGAAA CKO_03514 3275803 - 3276207 + | hypothetical protein TERM 4215 3276822 - 3276801 - g 80 -10.3 -3.90112 | CGCTTTGGAAGGAAA TTCATCATC ATTT GATGATGAA ATAAAAAAATACATA CKO_03515 3276592 - 3277554 + | hypothetical protein TERM 4216 3277700 - 3277714 + F 76 -4.3 -5.02357 | opp_overlap 3277700 ATATAAATAAATTAA GCATA AGGAA TATGC TTTTATTTAATTATA CKO_03516 3277745 - 3278182 + | hypothetical protein TERM 4217 3278679 - 3278667 - g 76 -3.4 -5.09426 | CCGAAGCTCAAAAAA TCTC GTAAT GAGA TGATGATAGAAAAGA CKO_03517 3278160 - 3279392 + | hypothetical protein CKO_03519 3279771 - 3279634 - | hypothetical protein CKO_03518 3279703 - 3280371 + | hypothetical protein CKO_03521 3280507 - 3280349 - | hypothetical protein CKO_03522 3280856 - 3280677 - | hypothetical protein CKO_03520 3280401 - 3280775 + | hypothetical protein TERM 4218 3280810 - 3280832 + gT 91 -7.6 -5.00616 | opp_overlap 3280807 3280810 TCAAGGGAAAATTTA GCCCGCAGTT GAA ACCTACGGGC TTTTTTACAAAAAAC TERM 4219 3280872 - 3280853 - GT 76 -5.1 -4.68607 | opp_overlap 3280853 TACAAAAAACATAAA TCACTTT TTAAAG AAAGTGA TTATCTTTTTCAGCC CKO_03523 3282223 - 3280853 - | hypothetical protein TERM 4220 3280929 - 3280942 + g 70 -3.1 -4.70169 | ACAGTCTCAATATTT TCCTT TAAA GAGGA TTTTATTGGCTCTGG TERM 4221 3282519 - 3282504 - R 70 -4.7 -4.45399 | opp_overlap 3282504, overlap 3282499 3282498 3282517 ATAGTAACAGTAAAA GCATC TAAGAG GATGC TTTTAAGCAATAATT CKO_03524 3283089 - 3282619 - | hypothetical protein CKO_03525 3283528 - 3283130 - | hypothetical protein CKO_03526 3285160 - 3283529 - | hypothetical protein TERM 4222 3284702 - 3284682 - G 74 -4.8 -4.68908 | opp_overlap 3284682 3284685 TTTACCCAAAATAAA TAAGATGA GTTAG TCATCCTA TTATCACTTAAAAAT CKO_03527 3286470 - 3285160 - | hypothetical protein CKO_03528 3287677 - 3286472 - | hypothetical protein TERM 4223 3287423 - 3287443 + g 80 -4.7 -5.05782 | TCTTACCAGTTCATC TATTTCCGC AAC GCAGAGATA TTTTTTAAGCTCAAT TERM 4224 3287552 - 3287582 + g 71 -6.4 -4.30844 | overlap 3287538 3287536 TGAGGCCGTTGCGCC TCTATTTCTTAT GTCTGTA GTAAGAAATAGA TTTTGGTAGTAAGCT TERM 4225 3287591 - 3287607 + g 91 -3.7 -5.60993 | AAATAGATTTTGGTA GTAAGCT GGT AGATTAC TTTTTTTATCAAGGA CKO_03529 3288344 - 3288057 - | hypothetical protein CKO_03530 3288684 - 3289109 + | hypothetical protein TERM 4226 3289118 - 3289100 - T 100 -8.9 -5.13016 | opp_overlap 3289100 AAGCAAAACTAAAAA GAGGCTA TAGAT TAGCCTC TTTACTGTCAGATTT TERM 4227 3289100 - 3289118 + T 77 -8.9 -3.85114 | opp_overlap 3289100 AAGCAAAACTAAAAA GAGGCTA TAGAT TAGCCTC TTTACTGTCAGATTT TERM 4228 3289300 - 3289331 + T 71 -7.6 -3.87869 | opp_overlap 3289300 3289299 3289302 AAATAATAATAAACC TATATTTTCAGAAA ACTC TTTCTTAAAATATA TTTATCAACCATTGC CKO_03531 3290223 - 3289354 - | hypothetical protein TERM 4229 3290017 - 3290006 - G 74 -4.4 -4.77165 | CCTTTGATAAGAAAA GGAT CACC ATCC AATATCTGCATATAA TERM 4230 3290315 - 3290286 - R 100 -6.6 -5.95539 | gap 1, opp_overlap 3290286 3290281 TTGCAAATAAAAAAA TGGCGT-CTCAAT TGGTT ATTGAATACGCCA TTTTACTTATAAAAA CKO_03532 3291582 - 3290335 - | hypothetical protein CKO_03534 3292058 - 3293077 + | hypothetical protein TERM 4231 3293087 - 3293108 + F 100 -15.1 -4.27192 | overlap 3293079 TTTTGATTGCCTTCA CCGGGCGGC ATTC GCTGCCCGG TTTTGCTCCCCCTTT TERM 4232 3293545 - 3293525 - g 73 -5.3 -4.56775 | ATTTTTGGCGAAAAA GGTCATCCA CTA CGGGCGACC GTCTCCGATCTTGGG CKO_03535 3293111 - 3294715 + | hypothetical protein TERM 4233 3294739 - 3294762 + T 93 -16 -2.98942 | opp_overlap 3294725 ATCCTGGTTCGCTAA GCGCAGCGCT TGAT GGCGCTGCGC TGTATCTGGCCGGAT CKO_03536 3295905 - 3294823 - | hypothetical protein CKO_03538 3297005 - 3295905 - | hypothetical protein TERM 4234 3296223 - 3296200 - GH 73 -10.2 -3.07787 | opp_overlap 3296198 3296212, overlap 3296192 3296189 AATACCAGCGTAATA CGCCAGTGCA GTTC CGCACGGGCG CGATTGGTATCAGTC TERM 4235 3296586 - 3296597 + gH 73 -5.8 -4.4078 | CGCCAGCGCGGCCAT GCCA GGAT TGGC TTTTGCTTCCGCCAG CKO_03537 3296968 - 3297162 + | hypothetical protein TERM 4236 3298711 - 3298732 + G 74 -11.5 -3.26947 | opp_overlap 3298710 3298709 CGGCAAAGCGAAAGG CGCAACCGG TCGT CCGGTGGCG TTGCTGTCGCAGTTC CKO_03539 3297272 - 3298783 + | leucyl aminopeptidase CKO_03540 3298794 - 3298946 + | hypothetical protein CKO_03541 3298912 - 3299355 + | DNA polymerase III subunit chi TERM 4237 3299586 - 3299570 - gf 71 -4.3 -4.62783 | overlap 3299573 CATGCAGGGTAAAAA CACCCTG TGG CAGGTCG GTACTGACCACGCCG TERM 4238 3300759 - 3300731 - gf 71 -6 -4.25256 | gap 2, overlap 3300728 GCGTCAGGAAAACAA CCTGAGCGCCGACG TTG CG-CTGCG-TCAGG ACGACGACGTACTGG TERM 4239 3300850 - 3300830 - gf 74 -7.5 -4.07568 | overlap 3300832 CGGCTGGCCGGAAAA CACCGACGC GCT GCGTCAGTT CCACCCGACCAGCGT TERM 4240 3300848 - 3300832 - gf 75 -10.1 -3.63744 | overlap 3300830 GCTGGCCGGAAAACA CCGACGC GCT GCGTCAG TTCCACCCGACCAGC TERM 4241 3301581 - 3301619 + GF 77 -9.4 -3.85698 | ACGCTGGTCACCGTG CTGGAAGGTCTGCTGCGC CTG GCGCATCCGATCATCCCG TTTATCACCGAGACC CKO_03542 3299355 - 3302210 + | valyl-tRNA synthetase TERM 4242 3302217 - 3302247 + GT 100 -17 -4.39002 | opp_overlap 3302222, overlap 3302222 GCGCTGTAACTTGAT GGAAACGCCGGAGA CCC TCTTCGGCGTTTTC TTTTATAAGGCATTT TERM 4243 3302222 - 3302242 + GT 100 -13.3 -5.18371 | opp_overlap 3302222, overlap 3302217 GTAACTTGATGGAAA CGCCGGAGA CCC TCTTCGGCG TTTTCTTTTATAAGG TERM 4244 3302242 - 3302222 - gT 86 -11.1 -3.66874 | opp_overlap 3302222 3302217 GTAACTTGATGGAAA CGCCGGAGA CCC TCTTCGGCG TTTTCTTTTATAAGG CKO_03544 3302777 - 3302250 - | hypothetical protein CKO_03543 3302179 - 3302304 + | hypothetical protein TERM 4245 3302339 - 3302328 - GT 74 -3 -4.86731 | overlap 3302323 GTTGCTGAAAGAAAA TCTT TCGT AAGA TCCCGCGTCGAATTC CKO_03545 3303625 - 3302774 - | hypothetical protein CKO_03546 3303803 - 3303663 - | hypothetical protein TERM 4246 3303861 - 3303881 + r 100 -14 -5.18371 | TTCCCTTCTACACTG CGCCGGAG TTACT CTCCGGCG TTTTATTTTATGCGC CKO_03547 3304413 - 3303889 - | hypothetical protein TERM 4247 3304015 - 3304035 + g 86 -4.1 -5.40072 | GAGCATATTTTTTTC GATACAA TTTTCTT TTGTATC TTTTTTTGGGGAGAA CKO_03548 3305264 - 3304410 - | hypothetical protein TERM 4248 3305398 - 3305380 - H 76 -4.6 -4.98255 | GGTTAATGATAAAAA TTTTTCTC AGA GAGAATAA CAGTCTTGCATGTTC CKO_03549 3305472 - 3305972 + | hypothetical protein TERM 4249 3305982 - 3306012 + T 80 -9.6 -3.86822 | opp_overlap 3305977, overlap 3305983 CTGTAAGTCACCCAC AGGCCGGATAAGGC GAC GCCATATCCGGCAA TTTATGCAAACATTC TERM 4250 3305983 - 3306011 + T 82 -13.1 -2.91772 | opp_overlap 3305977, overlap 3305982 TGTAAGTCACCCACA GGCCGGATAAGGC GAC GCCATATCCGGCA ATTTATGCAAACATT CKO_03550 3306463 - 3306038 - | hypothetical protein TERM 4251 3306751 - 3306735 - g 79 -2.9 -5.19328 | overlap 3306736 3306746 AGCCGACAAGAAAAA CGGCG TAGAAGT CGCCA GACTGACCGGCAAAA CKO_03551 3306628 - 3307632 + | ornithine carbamoyltransferase subunit F TERM 4252 3307690 - 3307633 - Tf 84 -10.7 -3.90922 | gap 1, opp_overlap 3307623 3307639, overlap 3307636 ACGCTGGCGAAATAA CGATTACGTCTTATCCGGCCTACAGA TCGTGCT CCCGTAGGCCGGGTAAGACGTTTT-G CGTCGCCACCCGGCA TERM 4253 3307688 - 3307636 - Tf 82 -13.5 -3.02371 | opp_overlap 3307623 3307639, overlap 3307633 CTGGCGAAATAACGA TTACGTCTTATCCGGCCTACAGA TCGTGCT CCCGTAGGCCGGGTAAGACGTTT TGCGTCGCCACCCGG TERM 4254 3307639 - 3307685 + TF 100 -18.9 -4.18018 | opp_overlap 3307636 3307633, overlap 3307623 GCGAAATAACGATTA CGTCTTATCCGGCCTACAG ATCGTGCTC CCGTAGGCCGGGTAAGACG TTTTGCGTCGCCACC CKO_03553 3308165 - 3307713 - | hypothetical protein CKO_03552 3308143 - 3308376 + | hypothetical protein CKO_03554 3308312 - 3308488 + | hypothetical protein TERM 4255 3308805 - 3308767 - f 82 -13.4 -3.09131 | opp_overlap 3308767, overlap 3308771 AAAATTAGCTGAACA GTAATGACTGCAAACAAT TTA ATTATTTGCAGCCACCAC TTCTTTATTCCTGAA TERM 4256 3308801 - 3308771 - f 85 -12.8 -3.37245 | opp_overlap 3308767, overlap 3308767 TTAGCTGAACAGTAA TGACTGCAAACAAT TTA ATTATTTGCAGCCA CCACTTCTTTATTCC CKO_03555 3308842 - 3310062 + | arginine deiminase CKO_03556 3310073 - 3311005 + | carbamate kinase TERM 4257 3311313 - 3311284 - g 76 -2.8 -5.03145 | gap 1, opp_overlap 3311290 TAATTTTCGAAAAAA CCTC-CACCCGCA CCCGC TGCGCGTTTGAGG TCGGCGCATTCGATC CKO_03557 3311118 - 3312122 + | ornithine carbamoyltransferase TERM 4258 3312128 - 3312161 + F 82 -11 -3.48276 | gap 1, opp_overlap 3312123, overlap 3312129 CGGCGACTAACCCCT C-CGGGCATGTGCCG CCTGA CGACGCATGCCCGTG TTATCTGGAGAGAAC TERM 4259 3312129 - 3312159 + F 93 -14.7 -3.31726 | opp_overlap 3312123, overlap 3312128 GGCGACTAACCCCTC CGGGCATGTGCCG CCTGA CGACGCATGCCCG TGTTATCTGGAGAGA CKO_03558 3312153 - 3313583 + | hypothetical protein TERM 4260 3313602 - 3313650 + T 82 -11.3 -3.53224 | gap 2, opp_overlap 3313646, overlap 3313603 CCGCCGGATGGCGCT TCG-CTTATCCGGCCTAC-AAGT TACGC ATTTCGTAGGCCGGATAAGGCGC TTTAGCGCCGCCATC TERM 4261 3313603 - 3313649 + T 86 -14.8 -2.71791 | gap 2, opp_overlap 3313646, overlap 3313602 CGCCGGATGGCGCTT CG-CTTATCCGGCCTAC-AAGT TACGC ATTTCGTAGGCCGGATAAGGCG CTTTAGCGCCGCCAT CKO_03559 3313785 - 3313615 - | hypothetical protein CKO_03560 3313851 - 3314360 + | hypothetical protein TERM 4262 3314357 - 3314344 - f 71 -3.9 -4.75372 | opp_overlap 3314333 ATTATTTATTAAAAA TGAAT TCTT ATTCA TGAGAACCGTTTGCG TERM 4263 3314539 - 3314555 + G 100 -13.7 -6.06723 | GCTCACCTATTCCAG GCCCCTC ATT GAGGGGC TTTTTTTTTGCCCAG CKO_03561 3314435 - 3314584 + | pyrBI operon leader peptide TERM 4264 3314852 - 3314842 - g 74 -2.4 -5.00616 | overlap 3314843 TCGCTGGGCAAAAAA GGCG AGA CGCT GGCGGATACCATCTC CKO_03562 3314587 - 3315522 + | aspartate carbamoyltransferase catalytic subunit CKO_03563 3315534 - 3315995 + | aspartate carbamoyltransferase regulatory subunit TERM 4265 3316199 - 3316185 - g 83 -7.8 -4.65895 | CGGTTGATCCAAAAA CCGGCA GCG TACCGG ATGACGTGTCCGCTC CKO_03564 3316070 - 3316456 + | hypothetical protein CKO_03565 3317846 - 3316560 - | hypothetical protein CKO_03566 3318386 - 3317877 - | hypothetical protein TERM 4266 3318219 - 3318207 - G 74 -7.7 -4.15044 | CGCTGCGCCAACAAA GGTGA ATG TCACC ATGCAAAGAATGGCG TERM 4267 3318855 - 3318826 - R 89 -9.3 -4.57755 | opp_overlap 3318829 3318832, overlap 3318828 ACGGAGTATAGAAAA GCGTAATGGCTGC CGCA GCAGCCATTATTC TGGATTATTGCCAGC TERM 4268 3318853 - 3318828 - R 71 -10.5 -2.59876 | opp_overlap 3318829 3318832, overlap 3318826 GGAGTATAGAAAAGC GTAATGGCTGC CGCA GCAGCCATTAT TCTGGATTATTGCCA TERM 4269 3318829 - 3318852 + r 93 -14 -3.47751 | opp_overlap 3318828 3318826, overlap 3318832 GAGTATAGAAAAGCG TAATGGCTGC CGCA GCAGCCATTA TTCTGGATTATTGCC TERM 4270 3318832 - 3318849 + r 87 -11.3 -3.86481 | opp_overlap 3318828 3318826, overlap 3318829 TATAGAAAAGCGTAA TGGCTGC CGCA GCAGCCA TTATTCTGGATTATT CKO_03567 3321424 - 3318860 - | magnesium-transporting ATPase MgtA TERM 4271 3319271 - 3319257 - G 71 -4.2 -4.57533 | AAGAAGATCATAAAA CGCC CCAGATC GGCG GGATTCCAGCGTTGC TERM 4272 3320876 - 3320893 + g 70 -3.3 -4.82901 | overlap 3320875 ATTGCTTTGCTTAGG GTCGCGG GTCG TCGCCAC TTTTTCTACCGGCAG TERM 4273 3321026 - 3321058 + g 74 -2.7 -4.90266 | gap 1, overlap 3321035 GCCCGGCACCAGTTG GTCGATGGGCAGCT CAACCC AGCTGTTC-TCGCC TTTTTCATTGATAAC CKO_03568 3321521 - 3321646 + | hypothetical protein CKO_03570 3322050 - 3321712 - | hypothetical protein TERM 4274 3321836 - 3321854 + gF 74 -11 -2.90075 | opp_overlap 3321836 GGTTTGTGGCAATTA TGGCGGTA TGA TACCGCCG TGTAATTAAACCAAA TERM 4275 3321940 - 3321953 + gF 73 -5.3 -4.57341 | opp_overlap 3321918, overlap 3321918 CATTGCCCCTGGCTT GAGTA AAGT TACTC TTTTTGACACAACTT CKO_03569 3321992 - 3322939 + | trehalose repressor TERM 4276 3322979 - 3322992 + FH 76 -2.3 -5.27779 | overlap 3322980 ATCTTCGCTGCGTTT CGGGA ACGT TCCCA TTTTTTAATATTCAC TERM 4277 3323149 - 3323134 - g 70 -5.4 -4.39375 | opp_overlap 3323134, overlap 3323131 3323143 3323145 AGCAAAGTAAAACAA GCTGAT ATAG ACCAGC TGATTGAACTGGTCG TERM 4278 3323674 - 3323660 - g 73 -5.6 -4.63218 | opp_overlap 3323671, overlap 3323662 CTGCGGTGAAGAAAA TGGGCG GCA CGCCGA TCCTCGGTATCGTAC CKO_03571 3323113 - 3324534 + | trehalose(maltose)-specific PTS system components IIBC TERM 4279 3325230 - 3325246 + G 74 -7.9 -4.07568 | overlap 3325231 TCCCGAACGATCTGG ACGGCGA TGG TCGCCGC TTTTACACCGACGGG TERM 4280 3325231 - 3325245 + G 72 -11.4 -3.04398 | overlap 3325230 CCCGAACGATCTGGA CGGCGA TGG TCGCCG CTTTTACACCGACGG CKO_03572 3324584 - 3326239 + | trehalose-6-phosphate hydrolase TERM 4281 3326244 - 3326277 + F 79 -10.3 -3.61398 | opp_overlap 3326240 3326246, overlap 3326245 TGCAAAAGTAATCAC AACGGGATACGGACA GACC TGTCTGTATCCCGGA TTATTCAGCCCACAG TERM 4282 3326245 - 3326276 + F 84 -13.8 -2.76696 | opp_overlap 3326240 3326246, overlap 3326244 GCAAAAGTAATCACA ACGGGATACGGACA GACC TGTCTGTATCCCGG ATTATTCAGCCCACA TERM 4283 3326275 - 3326246 - f 100 -15.1 -3.6052 | opp_overlap 3326245 3326244, overlap 3326240 CAAAAGTAATCACAA CGGGATACGGACA GACC TGTCTGTATCCCG GATTATTCAGCCCAC CKO_03573 3326575 - 3327183 + | hypothetical protein CKO_03574 3327847 - 3327188 - | hypothetical protein CKO_03576 3328189 - 3327917 - | hypothetical protein TERM 4284 3328139 - 3328126 - Gg 70 -3.1 -4.77165 | GTGGGGAGAAGAAAA TAACG TCAT CGTCA AAGTGGAAACACAAG TERM 4285 3328641 - 3328677 + GH 85 -8.7 -4.4715 | TCGGCGGCATTATGT CCGACGAGGTCTATAAA CGC TTTTTTGATCTCGACGG TTTTATGCCTTCAGG CKO_03575 3328028 - 3329425 + | hypothetical protein TERM 4286 3330023 - 3329991 - g 86 -7 -5.00616 | overlap 3329993 3329994 TGGCGCGGCAAAAAA TATTCGTGCAGACG ACGCG CATCTGCACGACAA AATATTCCCAATCGT TERM 4287 3330021 - 3329993 - g 83 -9.6 -4.13561 | overlap 3329991 3329994 GCGCGGCAAAAAATA TTCGTGCAGACG ACGCG CATCTGCACGAC AAAATATTCCCAATC TERM 4288 3330020 - 3329994 - g 81 -13.1 -3.07655 | overlap 3329993 3329991 CGCGGCAAAAAATAT TCGTGCAGACG ACGCG CATCTGCACGA CAAAATATTCCCAAT TERM 4289 3330569 - 3330556 - g 77 -8.1 -4.17048 | opp_overlap 3330556 CTGGTCGTAAAAGAA CTGGC GACC GCCAG TTGTGAAGAGGGCGA TERM 4290 3331769 - 3331787 + G 79 -7.4 -4.41494 | opp_overlap 3331741 3331765, overlap 3331771 CGCTGGACAACCGCC TGGAGCGT TTT ACGCTCAA TTTTGCTTCGCGCTC CKO_03577 3329440 - 3332058 + | hypothetical protein TERM 4291 3332736 - 3332717 - g 72 -11.4 -3.01924 | gap 1, opp_overlap 3332698 CATCCTGCTGGAATA CGCAGCGCG CGG CGCGC-GCG CAATCAGGCTCGATG TERM 4292 3332746 - 3332758 + G 81 -4.1 -5.24129 | overlap 3332698 3332744 3332747 CGCGCGCAATCAGGC TCGAT GCG ATCGG TTTTTTGTGGAAAGA CKO_03578 3332055 - 3333764 + | hypothetical protein TERM 4293 3333973 - 3333996 + G 74 -10.2 -3.60296 | opp_overlap 3333973 GTCCCACATGGGAAA TGCGGCTCGG TTGT CCAGGCCGCA TTTAGCGTCGCCCTG TERM 4294 3333996 - 3333973 - g 76 -10.2 -3.63627 | opp_overlap 3333973 GTCCCACATGGGAAA TGCGGCTCGG TTGT CCAGGCCGCA TTTAGCGTCGCCCTG CKO_03579 3333766 - 3334350 + | hypothetical protein CKO_03580 3334770 - 3336893 + | anaerobic ribonucleoside triphosphate reductase CKO_03581 3336909 - 3337085 + | hypothetical protein CKO_03582 3337000 - 3337464 + | anaerobic ribonucleotide reductase-activating protein TERM 4295 3337532 - 3337503 - T 95 -12.4 -3.96148 | opp_overlap 3337507, overlap 3337507 CTGCTTCAGGATAAA CAAATGTAATGC GTTATA GCATTACATTTG CATTAACATTCATTT TERM 4296 3337528 - 3337507 - T 82 -7.4 -4.59342 | opp_overlap 3337507, overlap 3337503 TTCAGGATAAACAAA TGTAATGC GTTATA GCATTACA TTTGCATTAACATTC CKO_03583 3339505 - 3337562 - | hypothetical protein CKO_03584 3340235 - 3339495 - | hypothetical protein CKO_03585 3341293 - 3340232 - | hypothetical protein TERM 4297 3340830 - 3340851 + g 71 -5.8 -4.37092 | CGCGCGACTACCGCC GCCTGCTC TACGCT GAGCATGC TTTTCTGCACGCAGT CKO_03586 3342467 - 3341334 - | dihydroorotase TERM 4298 3341719 - 3341705 - G 74 -11.4 -3.18467 | overlap 3341693 AAATGCCTAAGCTAA TCGCGC GCT GCGCGA CCGCAAAGCTCAGGC TERM 4299 3341973 - 3341985 + g 70 -6.9 -4.07568 | TTTGGCGCATTCCAG CGGCG TAA TGCCG TTTTCACCCACCACG CKO_03587 3343170 - 3342526 - | hypothetical protein TERM 4300 3342994 - 3342982 - G 74 -10.5 -3.53761 | GAAGCTTGCGCCAAA CGCGG CCA CCGCG CCGTAAACGCCGGTG CKO_03588 3343961 - 3343185 - | hypothetical protein CKO_03589 3344283 - 3343984 - | hypothetical protein TERM 4301 3344193 - 3344166 - G 72 -4 -4.71776 | overlap 3344156 3344168 3344169 CAATACGCAATAAAA TATGCGGCGATG CTTT CATCACCGCGCC CTGAACGTGGTTCAG TERM 4302 3344191 - 3344168 - G 76 -8.8 -3.96156 | overlap 3344156 3344166 3344169 ATACGCAATAAAATA TGCGGCGATG CTTT CATCACCGCG CCCTGAACGTGGTTC TERM 4303 3344190 - 3344169 - G 75 -12.3 -2.96609 | overlap 3344156 3344168 3344166 TACGCAATAAAATAT GCGGCGATG CTTT CATCACCGC GCCCTGAACGTGGTT TERM 4304 3344236 - 3344271 + g 77 -8.4 -4.13206 | gap 1 GGCGCGCGCTTTGGC TTCGCCTTTACCGGTGA CTC TCACC-GTAGTGGTGAA TTGTTCTTTCATACT CKO_03590 3344648 - 3344286 - | hypothetical protein CKO_03591 3344979 - 3344659 - | hypothetical protein TERM 4305 3344836 - 3344810 - G 89 -13.6 -3.53811 | TCCACTTCCGGCAAA GGCTCGCCGGTC ACT GACCGGTGCGCC ATGGCGCGAACATGA CKO_03592 3345198 - 3345031 - | hypothetical protein TERM 4306 3345221 - 3345195 - G 83 -5.9 -4.92783 | gap 1, overlap 3345196 AACCGATGAGAAAAA GCACATTC-GCG CGAT CGCCGAATGTGA AAAAGTGTGACGGGA TERM 4307 3345297 - 3345266 - R 71 -10.2 -2.75844 | gap 1, opp_overlap 3345276, overlap 3345265 TGGCCCAGGGGAAAT GCCGGATGACAACGC GAT GCGTCTT-ATCCGGC CTACATCACGTTATT CKO_03593 3345697 - 3345311 - | hypothetical protein TERM 4308 3345495 - 3345505 + g 71 -4.6 -4.59773 | TTATCTTCCAGCTTA GGCG GCG TGCC TTTTTGCGCATCCAG CKO_03594 3347094 - 3345742 - | peptidase PmbA CKO_03595 3347190 - 3347741 + | hypothetical protein TERM 4309 3347829 - 3347841 + T 70 -9.1 -3.30124 | overlap 3347828 TATTTGCCGGATGGC GACGC AAC GCGTC TTATCCGGCCTACAG TERM 4310 3347886 - 3347898 + T 70 -9.1 -3.30124 | overlap 3347878 GTATTGCCGGATGGC GACGC AAT GCGTC TTATCCGGCCTACAG CKO_03596 3348060 - 3347908 - | hypothetical protein CKO_03597 3349402 - 3348065 - | hypothetical protein TERM 4311 3349669 - 3349646 - g 83 -9.6 -4.09864 | ATTTATTGTCGAAAA GCAGCACGAG TTCT CTCATGCTAC CGGTGAGCTCACTGC CKO_03598 3349431 - 3350612 + | fructose-1,6-bisphosphatase TERM 4312 3350657 - 3350670 + T 72 -6.7 -4.21974 | opp_overlap 3350649, overlap 3350651 ATAAAACGCGCAGCG TTGCC ATCC GGCAA TTTATTGCCTGGTGG CKO_03599 3351827 - 3350715 - | hypothetical protein CKO_03600 3352886 - 3351909 - | inner membrane ABC transporter permease protein YjfF TERM 4313 3352043 - 3352016 - G 82 -5.6 -5.10765 | gap 1 AAATAAACAACAAAA TCCCGATAG-CGA TCT TCGTCCACCAGGA ACTCAGCGTGCCATC TERM 4314 3352881 - 3352871 - G 72 -2.4 -4.91511 | AGCCCAGCACAAAAA CCCC GAG GGTG ATCATCAACGGTAAG CKO_03601 3353859 - 3352897 - | hypothetical protein CKO_03602 3355435 - 3353933 - | hypothetical protein TERM 4315 3354379 - 3354399 + g 85 -9 -4.43213 | gap 1, overlap 3354380 TTTCCCGTACCGATG CGG-CGGCA ATAA TGCCGTCCG TTTTCCTGTCTTCCG CKO_03603 3356514 - 3355558 - | hypothetical protein TERM 4316 3356326 - 3356342 + g 74 -7.3 -4.12188 | CTGGTTTTCCTGTTT TTGCTGA CCG TCGGCAA TTTTCAGCGTGATGC TERM 4317 3356610 - 3356582 - H 77 -10.4 -3.4033 | overlap 3356580 3356583 AAACTATAGACAATA GGTGATGTAACG GATTG CGTTACATCACA CTTCAAAAAAGTAAA TERM 4318 3356609 - 3356583 - H 83 -13.9 -2.63113 | overlap 3356582 3356580 AACTATAGACAATAG GTGATGTAACG GATTG CGTTACATCAC ACTTCAAAAAAGTAA CKO_03604 3356825 - 3357355 + | inorganic pyrophosphatase TERM 4319 3357393 - 3357412 + T 100 -10 -5.24531 | opp_overlap 3357393 CGTAATTTTTTAAAA GCCCTCAT ATTT GTGAGGGC TTTTTTATGCCGGGT TERM 4320 3357412 - 3357393 - T 79 -9.3 -4.11484 | opp_overlap 3357393 CGTAATTTTTTAAAA GCCCTCA TATTTG TGAGGGC TTTTTTATGCCGGGT CKO_03605 3357690 - 3357487 - | hypothetical protein CKO_03606 3358827 - 3357700 - | hypothetical protein TERM 4321 3359035 - 3359011 - g 74 -7.2 -4.18737 | gap 1, overlap 3359014 TGAACAAAAAGATAA GTACGTCCTGA TAAT CCAGGACG-AC AGCTGGCACCACATA TERM 4322 3359076 - 3359054 - g 91 -9.9 -4.57353 | gap 1, opp_overlap 3359055 3359057, overlap 3359057 TGGCACCACATAAAA CAACGCCACC CGAA GGTGGCG-TG TTTTTTATCAGCACT TERM 4323 3359055 - 3359076 + G 100 -10.1 -5.24531 | opp_overlap 3359054 3359057, overlap 3359057 GGCACCACATAAAAC AACGCCACC CGAA GGTGGCGTG TTTTTTATCAGCACT TERM 4324 3359057 - 3359074 + G 100 -12.7 -4.25873 | opp_overlap 3359057 3359054, overlap 3359055 CACCACATAAAACAA CGCCACC CGAA GGTGGCG TGTTTTTTATCAGCA TERM 4325 3359074 - 3359057 - g 100 -12.7 -4.39748 | opp_overlap 3359055 3359057, overlap 3359054 CACCACATAAAACAA CGCCACC CGAA GGTGGCG TGTTTTTTATCAGCA CKO_03607 3358967 - 3359104 + | hypothetical protein CKO_03608 3359428 - 3359084 - | hypothetical protein TERM 4326 3359350 - 3359366 + g 87 -13.7 -3.21747 | opp_overlap 3359360, overlap 3359356 3359362 TATCGATACTGTAAT CGCCCAG CAA CTGGGCG TTGGTCATCCAGTGG CKO_03609 3363210 - 3359431 - | hypothetical protein TERM 4327 3362424 - 3362444 + g 91 -14.1 -3.02144 | TCATATTGCCGTCGA TGCTGCTGA CTT TCAGCAGCA TGTTGCGCACCGTCA TERM 4328 3363185 - 3363174 - G 78 -2.2 -5.22006 | GCAGCAGAATAAAAA TCAG TACG CCGA GGCTTATTTTCTTCC CKO_03610 3364940 - 3363207 - | hypothetical protein TERM 4329 3364057 - 3364076 + g 80 -4.3 -5.03314 | gap 1 GTGGTCAGGCTGTGG CCGTAGGA GTTCA TCC-ACGG TTTTTTCCACGTCGC TERM 4330 3364786 - 3364774 - G 86 -10.5 -4.07687 | opp_overlap 3364774 ACGCGCGCGCGAAAA CGCCG GTC CGGCG TCACTTCATCACTTT TERM 4331 3365025 - 3365013 - H 74 -3.3 -5.06816 | ACGGCTTAACAAAAA CCCAA CAA CCGGG ATTGAAAAACAGACG CKO_03611 3365259 - 3365792 + | hypothetical protein TERM 4332 3365848 - 3365870 + F 83 -9.1 -4.27259 | opp_overlap 3365848 3365845 TAGCGACTGAAATTA CCGGCCC ACATCCTTC GGGCCGG TTTTCAATGTGTATA TERM 4333 3365870 - 3365848 - f 75 -11.2 -2.9462 | opp_overlap 3365848, overlap 3365845 TAGCGACTGAAATTA CCGGCCCACA TCC TTCGGGCCGG TTTTCAATGTGTATA TERM 4334 3366158 - 3366179 + G 72 -12.3 -2.69319 | overlap 3366146 3366157 3366175 CTGTCGCCATTCTGG GCGGTATCG TCGG CGATGCCGC ATTCTCTCCGGCCTT TERM 4335 3366672 - 3366655 - g 83 -6.3 -4.86385 | gap 1, overlap 3366657 AGCCTGAAAAATAAA GTCGCGGA GCA TCCGC-AC TCAAAATTCCTGGTG TERM 4336 3367240 - 3367229 - g 71 -5.8 -4.34402 | GCCTCGACACCAAAA CCAG CATC CTGG TCCCTAAACTGCCGG CKO_03612 3365944 - 3367287 + | hypothetical protein TERM 4337 3367300 - 3367273 - T 76 -7.6 -4.28747 | overlap 3367276 AGCAAAGAGAAAGAA GAAGGCCCGGCA TAAA TGCCCGGCCCTG GAAACATCAACGGCT TERM 4338 3367297 - 3367276 - T 91 -11.5 -4.22749 | overlap 3367273 AAAGAGAAAGAAGAA GGCCCGGCA TAAA TGCCCGGCC CTGGAAACATCAACG TERM 4339 3367311 - 3367329 + T 100 -16 -5.33785 | opp_overlap 3367305 3367311 CCCTGGAAACATCAA CGGCTCCC ATT GGGAGCCG TTTTTTATACTACTT TERM 4340 3367329 - 3367311 - T 100 -16 -3.45571 | opp_overlap 3367311, overlap 3367305 CCCTGGAAACATCAA CGGCTCCC ATT GGGAGCCG TTTTTTATACTACTT CKO_03613 3367574 - 3367368 - | hypothetical protein CKO_03614 3367840 - 3368457 + | hypothetical protein TERM 4341 3368480 - 3368468 - T 73 -10.5 -3.11297 | overlap 3368466 ATTAATAGATAGAGA CCCGG AAG CCGGG GTTAAGGAACGATTC CKO_03615 3369194 - 3368454 - | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase TERM 4342 3369026 - 3369014 - G 71 -6.2 -4.36914 | overlap 3369016 CTTCTTCCGACAAAA CCGG GATAT CCGG CGTCAGCGCCTGTAA TERM 4343 3371176 - 3371160 - g 73 -9.4 -3.78934 | GGCGGCGGACAACAA CTGGCG TCTGG CGCCAG TTCACAGCGACACGA CKO_03616 3369376 - 3371328 + | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 4344 3371343 - 3371331 - T 70 -4.8 -4.45544 | overlap 3371332 3371334 3371335 TTTGAGTAAGTAAAA CCAC GCCGG GTGG CGGCTTCGCCTTACC CKO_03617 3371797 - 3371417 - | hypothetical protein CKO_03618 3371854 - 3372735 + | hypothetical protein CKO_03620 3373059 - 3372802 - | hypothetical protein CKO_03619 3373039 - 3373641 + | hypothetical protein CKO_03621 3373718 - 3374683 + | hypothetical protein CKO_03622 3376300 - 3374747 - | hypothetical protein TERM 4345 3376444 - 3376459 + H 73 -4 -4.77165 | overlap 3376445 GCACAAACATTTTTT TGTGAT GGTC ATCACG TTTTATTCTGACCCG TERM 4346 3376517 - 3376499 - H 72 -9 -3.53224 | opp_overlap 3376499 TATCTTCGGCTTAAA GATGTATT TAA AATACATC TTATATTATTGAGAA TERM 4347 3376499 - 3376517 + H 76 -9 -3.83318 | opp_overlap 3376499 TATCTTCGGCTTAAA GATGTATT TAA AATACATC TTATATTATTGAGAA CKO_03623 3376546 - 3377208 + | cell morphogenesis/cell wall metabolism regulator TERM 4348 3377231 - 3377265 + T 100 -15.1 -3.53012 | CCGGATGGCTCTAAC GCTTATCCGGCCTAC AATCC GTAGGCCCGGTAAGC TTTGCGCCACCGGGC CKO_03624 3378697 - 3377288 - | D-alanine/D-serine/glycine permease TERM 4349 3378087 - 3378059 - G 76 -8.8 -3.9243 | GAAGCCCGCAAAGAA GCCGCTGATCCC TTTCG GGAACCAGCCGC CATCATTCCACAGAT TERM 4350 3378598 - 3378578 - G 77 -8.1 -4.07877 | GGAGCCCATAAATAA GCCGGTGCC GAT GGCGCCGCC AATCGCAATAAGCTG TERM 4351 3378668 - 3378679 + g 71 -5.8 -4.22652 | overlap 3378666 AGCCGGTGCCTGTTC GTCG GCAA CGAC TTTTACCTGATCTAC CKO_03625 3379642 - 3379007 - | peptidyl-prolyl cis-trans isomerase TERM 4352 3379403 - 3379434 + g 74 -10.2 -3.53012 | gap 1, opp_overlap 3379401 3379402 CATTGCCTGGAAACG TTCGCGA-CGTACGG CAT CCGCACGTTCGTGAA TTTCACGCAGCGCGC CKO_03626 3379847 - 3380497 + | hypothetical protein TERM 4353 3380562 - 3380597 + T 85 -14 -2.94232 | opp_overlap 3380567, overlap 3380562 CGCGATTGCAGGTCT GATAAGCGGTAGCGCC ATCA GGCGTTACCGCTTCAC CTTGTTTACCCACCA TERM 4354 3380562 - 3380598 + T 95 -12.4 -3.90744 | gap 1, opp_overlap 3380567, overlap 3380562 CGCGATTGCAGGTCT GAT-AAGCGGTAGCGCC ATCA GGCGTTACCGCTTCACC TTGTTTACCCACCAG TERM 4355 3380592 - 3380567 - T 93 -14.7 -3.30124 | opp_overlap 3380562 3380562 TTGCAGGTCTGATAA GCGGTAGCGCC ATCA GGCGTTACCGC TTCACCTTGTTTACC CKO_03627 3381515 - 3380586 - | hypothetical protein TERM 4356 3381160 - 3381148 - G 89 -3.3 -5.44721 | opp_overlap 3381149, overlap 3381149 AGCACGCTAAAAAAA GTGCC TGT GGCAT TCATGATCGATCCTT TERM 4357 3381633 - 3381605 - RH 71 -9.6 -3.22113 | opp_overlap 3381610, overlap 3381610 AGGGGGGCAGAAAAG CAAAACGCCAGC ACAAG GCCGGCGTTTTT ACGCGATAGAAGAAT TERM 4358 3381628 - 3381610 - RH 93 -9.5 -4.73108 | opp_overlap 3381610, overlap 3381605 GGCAGAAAAGCAAAA CGCCAGC ACAAG GCCGGCG TTTTTACGCGATAGA TERM 4359 3381610 - 3381628 + rH 80 -7.3 -4.58395 | opp_overlap 3381605 3381610 GGCAGAAAAGCAAAA CGCCAGC ACAAG GCCGGCG TTTTTACGCGATAGA CKO_03629 3382103 - 3381654 - | 50S ribosomal protein L9 CKO_03628 3381699 - 3382130 + | hypothetical protein CKO_03630 3382372 - 3382145 - | 30S ribosomal protein S18 CKO_03631 3382691 - 3382377 - | primosomal replication protein N CKO_03633 3383093 - 3382698 - | 30S ribosomal protein S6 CKO_03632 3382812 - 3383195 + | hypothetical protein CKO_03634 3383287 - 3383445 + | hypothetical protein CKO_03635 3383442 - 3383702 + | hypothetical protein TERM 4360 3383744 - 3383761 + T 100 -9.8 -5.24129 | GCCATAGTTTGACTT GCCCCC TTCACC GGGGGC TTTTTTATGGCAAAA CKO_03636 3384523 - 3383837 - | L-ribulose-5-phosphate 4-epimerase CKO_03638 3385377 - 3384523 - | L-xylulose 5-phosphate 3-epimerase TERM 4361 3385318 - 3385338 + Gg 100 -12.5 -4.7497 | opp_overlap 3385318 3385315 CAGGCGATCCAACCA GCACTCCCC GGC GGGGAGCGC TTTTTCGTAGATGCC TERM 4362 3385338 - 3385318 - Gg 83 -14.7 -2.75382 | opp_overlap 3385318, overlap 3385315 CAGGCGATCCAACCA GCACTCCCC GGC GGGGAGCGC TTTTTCGTAGATGCC CKO_03639 3386025 - 3385387 - | 3-keto-L-gulonate-6-phosphate decarboxylase CKO_03637 3384859 - 3386031 + | hypothetical protein CKO_03641 3386518 - 3386051 - | L-ascorbate-specific enzyme IIA component of PTS CKO_03642 3386785 - 3386528 - | L-ascorbate-specific enzyme IIB component of PTS CKO_03640 3386457 - 3386852 + | hypothetical protein CKO_03643 3388246 - 3386849 - | ascorbate-specific PTS system enzyme IIC CKO_03644 3388561 - 3388394 - | hypothetical protein CKO_03645 3388595 - 3389674 + | putative L-ascorbate 6-phosphate lactonase TERM 4363 3389686 - 3389703 + F 100 -12.7 -5.14985 | overlap 3389681 GTAATTGTTCTCCGA TGCCGGG TTTT CCCGGCA TTTTTCTATATTTAC CKO_03646 3389781 - 3390536 + | transcriptional repressor UlaR TERM 4364 3390595 - 3390554 - T 74 -5.8 -4.56775 | gap 1, opp_overlap 3390589, overlap 3390541 3390538 3390586 ATGCTGGCGGAAAAA CGACACCGT-TGCCGCCAG CGCCT CTGACGTAATACGGTGGCG TACGCCTGCTTCCCA CKO_03647 3391282 - 3390533 - | esterase CKO_03648 3391461 - 3391790 + | hypothetical protein CKO_03650 3392277 - 3392095 - | hypothetical protein CKO_03649 3391921 - 3392196 + | hypothetical protein CKO_03651 3393934 - 3392282 - | isovaleryl CoA dehydrogenase TERM 4365 3393207 - 3393194 - G 79 -3.1 -5.24531 | gap 1, opp_overlap 3393194 ACGCGGGACAAAAAA GCAGGA TAA TCC-GC CTTTCGTCTGCGCCA TERM 4366 3393560 - 3393546 - G 85 -9.2 -4.4767 | GCATGCAGCATAAAA CGCGCA GCC CGCGCG ACAAACGCCCCCTGC TERM 4367 3393986 - 3394003 + r 77 -11.3 -3.18264 | opp_overlap 3393986 AACGGTCACAAAAAA GCCATCC CGAG GGATGGC TTCATCAGTCAAAAG TERM 4368 3394003 - 3393986 - R 100 -11.3 -5.25803 | opp_overlap 3393986 AACGGTCACAAAAAA GCCATCC CGAG GGATGGC TTCATCAGTCAAAAG CKO_03652 3394753 - 3394022 - | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 4369 3394438 - 3394384 - G 76 -12.9 -2.82623 | opp_overlap 3394393 3394395 CTTTCGGCACAATGA CCGCATGTACGCCAGCGGC-GTCTGCG CTA CGCAGACAGGCGCCGAGGTT-ATGCGG ATCGGTCACGCCGTC TERM 4370 3394586 - 3394600 + g 72 -11.4 -3.05384 | opp_overlap 3394586 3394584 3394582 TTTTTCATCAAGATA CTGGCG GTT CGCCAG TTGGATCACCACGCC TERM 4371 3394600 - 3394586 - G 72 -11.4 -3.12895 | opp_overlap 3394586, overlap 3394584 3394582 TTTTTCATCAAGATA CTGGCG GTT CGCCAG TTGGATCACCACGCC TERM 4372 3394843 - 3394816 - R 89 -11.2 -4.0162 | GGTCTACAGTACAAA CGCCCTCTCCAC GCAG GGGGAGAGGGGG AAATTACTCAGCTGA CKO_03653 3397321 - 3394847 - | exoribonuclease R TERM 4373 3394888 - 3394899 + g 73 -5.8 -4.48877 | overlap 3394880 3394889 3394893 CGCGCTTCGCTTTTG TCGC GGCA GCGA TTTTCTGCGTCTTTG TERM 4374 3397155 - 3397180 + g 76 -5.4 -4.75063 | overlap 3397156 TCAATGTTCAGTTCC GCAGCCAACT CATCAC GGTTGGCTGG TTTTTCACGTTTTGT CKO_03654 3397695 - 3397318 - | transcriptional repressor NsrR TERM 4375 3397544 - 3397558 + g 91 -7 -5.15634 | opp_overlap 3397532, overlap 3397545 TTAGCCGGTTTACCC AGGCGG ATA CCGCCA TTTTTTCCTCGAATA TERM 4376 3397545 - 3397557 + g 76 -10.5 -3.68658 | opp_overlap 3397532, overlap 3397544 TAGCCGGTTTACCCA GGCGG ATA CCGCC ATTTTTTCCTCGAAT CKO_03656 3397953 - 3397831 - | hypothetical protein CKO_03655 3397724 - 3397921 + | hypothetical protein TERM 4377 3397958 - 3397935 - GT 85 -12.4 -3.31248 | overlap 3397897 GAACAGGTCTGATAA GCGCAGCACC ATCA GGCACTGCGC CATGACCCCAAATTA CKO_03657 3399269 - 3397971 - | adenylosuccinate synthetase TERM 4378 3398899 - 3398909 + g 71 -8.2 -3.86194 | overlap 3398898 3398905 GTGCCGATCGCTTTC GCGC CAC GCGC TTTCTCACGCGCGTT CKO_03659 3399573 - 3399361 - | hypothetical protein CKO_03658 3399296 - 3399559 + | hypothetical protein TERM 4379 3399626 - 3399590 - TR 100 -10.1 -4.96848 | opp_overlap 3399590 3399595 3399620, overlap 3399595 GTCCTTATATAAAAA GAAAACCACCGCCTCCC TGA GGATGCCGGTGGTTTTG TTCATCTAAAACCGT TERM 4380 3399595 - 3399621 + Tr 88 -8.7 -4.75472 | gap 1, opp_overlap 3399590 3399595, overlap 3399590 3399620 TATATAAAAAGAAAA CCACC-GCCTCC CTGA GGATGCCGGTGG TTTTGTTCATCTAAA TERM 4381 3399621 - 3399595 - TR 100 -10 -5.38839 | opp_overlap 3399595 3399590 3399620, overlap 3399590 TATATAAAAAGAAAA CCACCGCCTCCC TGA GGATGCCGGTGG TTTTGTTCATCTAAA CKO_03660 3400656 - 3399652 - | FtsH protease regulator HflC CKO_03661 3401915 - 3400659 - | FtsH protease regulator HflK TERM 4382 3400687 - 3400706 + g 83 -12.8 -3.1994 | CGCTGGTAGTCGTTA CGCTGCGC GTTA GCGCGGCG TTGGTCCATAATATC TERM 4383 3400822 - 3400835 + g 71 -9.5 -3.59738 | opp_overlap 3400774 CTGTCTTTTGCCGCA GGCGC GTTA GCGCC TTTCAGCATCTGATC TERM 4384 3401800 - 3401822 + g 71 -4.7 -4.53439 | opp_overlap 3401795 3401800 ATATCATCAAGATCA GGTGGCCCC TGATC GCGACCACC TTTGTTTCCATTTCC CKO_03662 3403288 - 3402008 - | putative GTPase HflX TERM 4385 3402243 - 3402280 + g 88 -10 -4.4768 | gap 1 AAAAGCTGTGGTATC CCAATCCCTGTTTGCGC GGAAA GC-CAGACACGGATTGG TTTGTTCTCTTCATC TERM 4386 3403342 - 3403313 - R 71 -10.7 -2.72799 | gap 1, opp_overlap 3403314, overlap 3403310 CCTCGATATATATCA GCGGGGAACGCAGG TTC CCTG-GCTCCCCGT GTGTAAAACAGCCAA TERM 4387 3403314 - 3403341 + r 77 -12 -2.87132 | gap 1, opp_overlap 3403313 3403310 CTCGATATATATCAG CGGGGAACGCAGG TTC CCTG-GCTCCCCG TGTGTAAAACAGCCA CKO_03663 3403670 - 3403362 - | RNA-binding protein Hfq TERM 4388 3403430 - 3403449 + g 76 -10 -3.78778 | CGTGATGGTAGTTAC TGCTGGTG CCGC CACCGGCA TTGTTACTGTGATGA TERM 4389 3403642 - 3403615 - G 81 -12.8 -3.14528 | gap 1, opp_overlap 3403614 3403610, overlap 3403607 ATAGAAACTGGAACA CGTTCCCG-ACGC AGT GCGTTCAGGAACG GATCTTGTAAAGATT CKO_03664 3404705 - 3403755 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 4390 3403798 - 3403809 + g 71 -5.8 -4.2349 | AATACTTCGTTTCGC GCCT GGTC AGGC TTTTCACTGTCAAGC CKO_03665 3406557 - 3404698 - | DNA mismatch repair protein TERM 4391 3405268 - 3405278 + g 74 -8.2 -4.0616 | overlap 3405260 ATGCCCTGCCAGCGA CGGC GCT GCCG TTTCTGCTTCCGGTG TERM 4392 3405489 - 3405499 + g 77 -8.2 -4.10657 | overlap 3405482 AATGATTACGCCCGG CCGC CAC GCGG TTTTCCGGGATGTGA TERM 4393 3406085 - 3406097 + g 71 -10.5 -3.21395 | overlap 3406083 GTGCGCATAAACTTG CGCCG TGC CGGCG TGTTGTAGAACAAGT TERM 4394 3406335 - 3406362 + g 91 -6.8 -5.26875 | overlap 3406327 TTTTACTGGTGGCAT GGCGGGCCAGCG CCAG CGCCAGCTCGTC TTTTTTAATTCCGCA CKO_03666 3407898 - 3406567 - | N-acetylmuramoyl-l-alanine amidase II TERM 4395 3407231 - 3407251 + g 75 -4 -4.83615 | gap 1 AACGTGCGCAGCTTA CG-GGCGAT AGCA ATCGTCACG TTTTTCTCCCGCGTC CKO_03667 3408376 - 3407915 - | putative ATPase TERM 4396 3408302 - 3408286 - GR 79 -10.9 -3.3353 | overlap 3408284 3408282 CGCCGTACAAATAGA TGACGGT CGC ACCGTCA CAGGCTTTCGCTACG CKO_03669 3409895 - 3408348 - | hypothetical protein TERM 4397 3409579 - 3409599 + gH 70 -8.9 -3.40299 | overlap 3409595 GCCTCGCGCGCCTGC GCCGCCTCT TCA GGAAGCGGC TTATCGCTCTCCTGC CKO_03668 3409894 - 3411033 + | hypothetical protein TERM 4398 3411336 - 3411352 + Tr 73 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA TERM 4399 3411480 - 3411496 + Tr 73 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA CKO_03672 3412345 - 3411800 - | oligoribonuclease TERM 4400 3411910 - 3411894 - G 70 -6.5 -4.07568 | opp_overlap 3411879 CCCTGCTTGGTAAAA CCGGCAA GGA TTTCCGG CTTCCAGCGACGCGC TERM 4401 3412019 - 3412005 - G 76 -5.6 -4.80455 | opp_overlap 3412004 TACTTAAACAGAAAA CGGCGA TCC TGGCCG ATGCTGTTGCCACAA TERM 4402 3412984 - 3412936 - g 83 -7.5 -4.63218 | opp_overlap 3412936 TCGTGCTCAATAAAA TCGATCTGCTGGATGACGAAG GGATGGA CTTCGTTAACGAGCAGATGGA TATCTATCGCGACAT CKO_03673 3412419 - 3413504 + | ribosome-associated GTPase TERM 4403 3414432 - 3414448 + G 76 -10.1 -3.86524 | opp_overlap 3414413 3414432 3414431 GTCAGTGACCAAAAT CGGTCAG CCG CTGGCCG TTTCTACCGAACTCT CKO_03674 3413596 - 3414564 + | phosphatidylserine decarboxylase CKO_03675 3414605 - 3417907 + | hypothetical protein CKO_03676 3419584 - 3417992 - | hypothetical protein TERM 4404 3418968 - 3418954 - G 80 -5 -4.91084 | CATTTAATAACAAAA TAGCGA CAC TCACTA ACAACAAAACCAAAT TERM 4405 3419609 - 3419589 - R 72 -8.4 -3.75419 | AAAATCAACACAGAA TTGATACC TGAAT GGTATCAA ACATCCAGACTTATA TERM 4406 3419694 - 3419654 - R 100 -15.6 -5.15969 | opp_overlap 3419655 3419661 3419666 GGGGAATTGAAAAAA TGTGCTACAAAATGGCGC TAATT GCGCCATTTTGTTTCACA AAAGAGGGGTTTTCG TERM 4407 3419661 - 3419687 + r 100 -15.3 -3.53012 | opp_overlap 3419654, overlap 3419655 3419666 TGAAAAAATGTGCTA CAAAATGGCGC TAATT GCGCCATTTTG TTTCACAAAAGAGGG TERM 4408 3419666 - 3419682 + r 93 -9.4 -4.86731 | opp_overlap 3419654, overlap 3419655 3419661 AAATGTGCTACAAAA TGGCGC TAATT GCGCCA TTTTGTTTCACAAAA CKO_03677 3420690 - 3419713 - | lysyl-tRNA synthetase TERM 4409 3420623 - 3420608 - G 75 -6.8 -4.42806 | opp_overlap 3420608, overlap 3420609 CGATCGGCAAAGAAA CGACGG ATCT CCGTCA TAATTGCCGCACGTT CKO_03678 3420973 - 3422799 + | fumarate reductase flavoprotein subunit CKO_03679 3422799 - 3423533 + | fumarate reductase iron-sulfur subunit CKO_03680 3423544 - 3423939 + | fumarate reductase subunit C CKO_03681 3423950 - 3424309 + | fumarate reductase subunit D TERM 4410 3424346 - 3424314 - f 90 -15 -2.57985 | opp_overlap 3424316, overlap 3424310 TCACAATCTAAGCCA TACGCCCTCTTATC TGCAC GATAAGAGGGCGTT TTTTTATTTCCCCTT TERM 4411 3424316 - 3424344 + F 100 -17.6 -5.95539 | opp_overlap 3424314 3424310 ACAATCTAAGCCATA CGCCCTCTTATC TGCAC GATAAGAGGGCG TTTTTTTATTTCCCC CKO_03682 3424419 - 3424952 + | outer membrane lipoprotein Blc CKO_03683 3425286 - 3424969 - | quaternary ammonium compound-resistance protein SugE TERM 4412 3425317 - 3425304 - H 71 -3.7 -4.82901 | overlap 3425305 CTGGCTCCAGAAAAA TGGGG CCGT CCCCG GTGAAAGATACATTT TERM 4413 3425349 - 3425330 - H 74 -10.8 -3.18571 | overlap 3425328 3425326 CCGGTGAAAGATACA TTTGCAGG TCGT CCTGCAAA GCAGAGGTGTGAGAA CKO_03684 3425425 - 3426141 + | hypothetical protein TERM 4414 3426168 - 3426138 - T 95 -14.8 -3.56972 | opp_overlap 3426137 3426136, overlap 3426134 3426142 ACCGGAGCAAATCAA TTAACGGTACGACG CCA CGCCGTACCGTTCA CATTTATTGCTGGGC TERM 4415 3426164 - 3426142 - T 100 -15.6 -3.51202 | opp_overlap 3426137 3426136, overlap 3426138 3426134 GAGCAAATCAATTAA CGGTACGACG CCA CGCCGTACCG TTCACATTTATTGCT CKO_03685 3426612 - 3426427 - | hypothetical protein CKO_03687 3427317 - 3426751 - | elongation factor P CKO_03686 3426622 - 3427329 + | hypothetical protein CKO_03688 3427359 - 3428387 + | hypothetical protein TERM 4416 3428420 - 3428397 - f 100 -16.8 -3.59247 | overlap 3428388 CAATAATTGTTCAAA CGAGTGTCCG GTTT CGGACACTCG CCCTTAAAATCGCTT TERM 4417 3428817 - 3428806 - g 93 -4.4 -5.53991 | GAGTCAGTAAAAAAA TGCT TGAG AGCA TTCCGGCCATTCAGG CKO_03689 3428571 - 3429434 + | hypothetical protein TERM 4418 3429439 - 3429428 - g 91 -7.2 -4.84529 | overlap 3429429 TGAGAAAGCGAAAAA CGCC TGAT GGCG CTGCGCTTATCCGGC CKO_03690 3429412 - 3429552 + | hypothetical protein CKO_03691 3429979 - 3429614 - | hypothetical protein TERM 4419 3430052 - 3430075 + r 71 -8 -4.00066 | opp_overlap 3430052 TGACCAAAAGAAAAA CCCCCGAACA TTTC TGCCCGGGGG TTTCTAAATTCTGGG TERM 4420 3430075 - 3430052 - R 100 -12.4 -5.50723 | opp_overlap 3430052 TGACCAAAAGAAAAA CCCCCGAACA TTTC TGCCCGGGGG TTTCTAAATTCTGGG CKO_03692 3431873 - 3430227 - | chaperonin GroEL TERM 4421 3430862 - 3430890 + g 74 -9.5 -3.72374 | overlap 3430860 GGATCGCAGACTCTT CACCCACGCCATC AAT GATGGTGGTGGTG TCTTTGTTGATCACA CKO_03693 3432318 - 3431917 - | hypothetical protein TERM 4422 3433523 - 3433533 + G 75 -6.8 -4.51777 | CGCGCTGATCGTCTA TGCC AAC GGCA TTTTCATTATGATCT CKO_03694 3432486 - 3433736 + | inner membrane protein YjeH TERM 4423 3433736 - 3433763 + T 71 -7.6 -3.86897 | gap 1, overlap 3433737 GCGTCAGCATTCGTA GGCCCGGTAAGCG TAG CGCC-ACCGGGCA TTTATGCCGGATGGC TERM 4424 3433737 - 3433762 + T 74 -11.1 -2.91924 | gap 1, overlap 3433736 CGTCAGCATTCGTAG GCCCGGTAAGCG TAG CGCC-ACCGGGC ATTTATGCCGGATGG CKO_03695 3434297 - 3433821 - | FxsA TERM 4425 3434268 - 3434249 - G 73 -5 -4.60808 | GGATAAAAATAGAAA TCTCAATG TAAA CATAGAGA AAGATGGCAATAAAC TERM 4426 3434772 - 3434757 - g 74 -3.2 -4.92757 | opp_overlap 3434757, overlap 3434752 TTAGCAATAACAAAA TCAGCG ATAT CCCTGA ATTTGTACGCGGTAT TERM 4427 3435636 - 3435622 - g 74 -7.8 -4.08485 | opp_overlap 3435621, overlap 3435623 GCCAGCGAAAGTAAA CCCGGT AGT ACCGGA AGTTGTTAACCAGGT CKO_03696 3434486 - 3436072 + | aspartate ammonia-lyase TERM 4428 3436096 - 3436115 + TF 100 -13.6 -5.58179 | opp_overlap 3436093 3436091 3436089 3436096 GGTAGTAACACAGGA GGCACGTC AGAT GACGTGCC TTTTTTCTTGTCATA TERM 4429 3436115 - 3436096 - Tf 84 -13.6 -2.77148 | opp_overlap 3436096, overlap 3436093 3436091 3436089 GGTAGTAACACAGGA GGCACGTC AGAT GACGTGCC TTTTTTCTTGTCATA CKO_03698 3437545 - 3436196 - | hypothetical protein TERM 4430 3436431 - 3436421 - Gg 70 -3.2 -4.72333 | AACCAGACGGAAAAA CTGC TGC GCAA AAACCCGAAATACAT CKO_03697 3436187 - 3437488 + | anaerobic C4-dicarboxylate transporter TERM 4431 3437498 - 3437519 + gF 100 -15.1 -4.20783 | CTGTAAGTTCTCCTC GCGGGGCGT ATAC GCGCCCCGC TTTCTTACCTCCGCT CKO_03699 3437610 - 3437957 + | divalent-cation tolerance protein CutA CKO_03700 3437933 - 3439642 + | thiol:disulfide interchange protein precursor TERM 4432 3439863 - 3439877 + G 70 -5.6 -4.45544 | opp_overlap 3439863, overlap 3439864 GTCAACAGGTAGACA TCTGGC GTC GCCAGC TTTTGCTTGATGAAA CKO_03701 3439655 - 3440254 + | putative transcriptional regulator TERM 4433 3440290 - 3440303 + F 73 -4.5 -4.78205 | opp_overlap 3440290 TTTGCGTGAAAAGCA GGCAG TCAG CTGTC TTTTGTCATTTTTTT TERM 4434 3440412 - 3440396 - f 73 -10.9 -2.62616 | opp_overlap 3440395 3440394 3440391 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 4435 3440474 - 3440459 - f 93 -10.4 -4.47183 | opp_overlap 3440459 CACTATTTAAAGAAA CCAGCC CGTA GGCTGG TTTTTTGCTTTCTGG TERM 4436 3440459 - 3440474 + F 100 -10.4 -5.42514 | opp_overlap 3440459 CACTATTTAAAGAAA CCAGCC CGTA GGCTGG TTTTTTGCTTTCTGG CKO_03703 3440993 - 3441403 + | hypothetical protein CKO_03704 3441704 - 3441579 - | hypothetical protein TERM 4437 3442365 - 3442388 + G 91 -7.6 -4.85599 | gap 1, opp_overlap 3442363 3442368, overlap 3442368 ATTCGCCTTACAAGC CAAC-ATTCAG AAA CTGAATGGTTG TTTTTATCACGTAAA TERM 4438 3442597 - 3442615 + G 74 -3 -4.8667 | overlap 3442600 ATACTGTCTGGTATA CTGCCAGT AAC GCTGGTCG TTTTTATGGCATCTG CKO_03705 3442068 - 3442670 + | tyrosine recombinase TERM 4439 3442657 - 3442646 - f 100 -4.4 -5.92399 | overlap 3442652 3442653 GAATAAAACAAAAAA CAGA GATG TCTG TAGCAGACTGTAAGG CKO_03706 3443075 - 3443713 + | tyrosine recombinase TERM 4440 3443992 - 3443982 - Tf 73 -4 -4.78121 | AAAACCAAAAAATAA GAAT TAA ATTC CAGAACAACGCATAA CKO_03709 3444869 - 3444666 - | hypothetical protein CKO_03707 3444187 - 3444735 + | hypothetical protein TERM 4441 3444762 - 3444778 + gF 90 -13.7 -3.35679 | opp_overlap 3444759 3444756 GACAGGGAAGCATTC CGGGCCA GGA TGGCCCG TTATCCATAACAGGA CKO_03708 3444808 - 3445347 + | hypothetical protein TERM 4442 3445430 - 3445468 + G 75 -5.9 -4.56597 | gap 1, overlap 3445432 ACTGGAGATGACACG CGGCTTACTGGCGGGCTT TTTG ATGCTCGCC-GCAAGCGG TTTTTCCACCAGCGC TERM 4443 3445512 - 3445491 - g 72 -12.3 -2.7185 | gap 1, opp_overlap 3445489 3445489 ACCAGCGCTGAAGCA GGCGTGGCGC TGG GCGCCAC-CC GGGTTATCTATCCGG TERM 4444 3445617 - 3445607 - g 77 -8.2 -4.08767 | overlap 3445608 GTCATGGGTTGAAAA CGCC GAT GGCG GCAAAGATGGTCGTT CKO_03710 3445383 - 3446108 + | hypothetical protein CKO_03711 3446191 - 3448815 + | hypothetical protein CKO_03712 3448823 - 3449356 + | hypothetical protein TERM 4445 3449682 - 3449668 - g 74 -3.4 -4.91109 | overlap 3449652 CGGTTATTACAAAAA CCAGGG GAC CGCCGG CAATATTCAGCTCGA CKO_03713 3449369 - 3449872 + | hypothetical protein CKO_03714 3449889 - 3450791 + | hypothetical protein TERM 4446 3450921 - 3450889 - g 76 -11.9 -3.06302 | opp_overlap 3450897, overlap 3450912 3450915 ATGACCTGCAGTCAA CGGCGACCGGTGCTG CTG CAACACCAGACGCAG GAGCGCCTTTCGCTA TERM 4447 3451417 - 3451395 - g 81 -4 -5.1861 | GTCAGGACTAAAAAA GATGGTGGCG TCT CACCCGCATC TGATTACCCGCTTTC CKO_03715 3450847 - 3452253 + | hypothetical protein CKO_03716 3454280 - 3452382 - | hypothetical protein TERM 4448 3453465 - 3453450 - G 72 -3.9 -4.7878 | TATCGACAAAACAAA CAGCG AATGGG CGCCG TCTTCGCCGTCATAG TERM 4449 3454589 - 3454622 + r 100 -15.9 -3.14132 | opp_overlap 3454582 TTTATTAATACGCCC GGCCCCGCTCCGGCG CGAC TGCCGAAGCGGGGCA TTCATAGCCAAAAAC CKO_03717 3456331 - 3454637 - | malate dehydrogenase TERM 4450 3454724 - 3454683 - G 73 -5.2 -4.65895 | opp_overlap 3454684 TGCGGTAGCCAAAAA TGCGCCGTAATG-CGCTGTG TCAG CACTGCATCATC-CAGCGCA TCCGCTACGCCGGAC TERM 4451 3456038 - 3456052 + g 82 -5 -5.0133 | opp_overlap 3456032 ATAAACAATCGGCAG CATTTC CGG GAGATG TTTTTTCAGCAGGTA TERM 4452 3456323 - 3456307 - G 75 -6.5 -4.42653 | opp_overlap 3456310, overlap 3456310 ACGGGACGTATAAAA CATCGTG TGT CACGTTG CTGTCCATGAGTTAA CKO_03718 3457774 - 3456359 - | hypothetical protein TERM 4453 3456883 - 3456873 - G 93 -4.6 -5.45652 | overlap 3456875 AGCTCGAAGAAAAAA GCGA CCA CCGC CCCGAGGATCATCGC TERM 4454 3457098 - 3457087 - G 72 -2.2 -4.86731 | TGGCGGTAAAGAAAA TCAC CACC GCGA CGGCCAGCATAACCA TERM 4455 3457899 - 3457921 + H 100 -10 -5.64274 | opp_overlap 3457899 CACCGTGCTATAAAA TATGGGAAAG GGC TTTTCCCATA TTTTTTTGTGAGTAA TERM 4456 3457921 - 3457899 - H 83 -9.3 -4.3739 | opp_overlap 3457899 CACCGTGCTATAAAA TATGGGAAA GGGCT TTTCCCATA TTTTTTTGTGAGTAA TERM 4457 3458825 - 3458844 + G 79 -2.8 -5.252 | opp_overlap 3458828 3458829, overlap 3458829 TGGAGTCCATTTTTC AAAGCCGA ATTC TCGGTTTC TTTTTTATCGAACTG TERM 4458 3458829 - 3458840 + G 84 -5.8 -5.13354 | opp_overlap 3458828 3458829, overlap 3458825 GTCCATTTTTCAAAG CCGA ATTC TCGG TTTCTTTTTTATCGA TERM 4459 3458898 - 3458922 + G 70 -5 -4.40333 | opp_overlap 3458896, overlap 3458914 GAGTGACAATGAAGG CAACTTTGCC CAACT GGAAGAGTTG TTTCTCTTCTTTGAG CKO_03719 3458008 - 3458967 + | hypothetical protein TERM 4460 3458996 - 3458976 - T 79 -12.6 -2.82834 | overlap 3458963 TACCTGACCAGCAGA GTCGGGAG GGACG CTCCCGAC ATAAAGCGCTACGCA CKO_03720 3460375 - 3459005 - | hypothetical protein CKO_03721 3460646 - 3460365 - | hypothetical protein TERM 4461 3460564 - 3460596 + g 70 -7 -4.09685 | overlap 3460554 ACAATGAGTTGCTTT GTTAGTGCAACGCG TATTT CGCTTTGCTTTAAC TTTTCGCAAATAAGC TERM 4462 3461456 - 3461444 - g 73 -9.1 -3.86897 | GCCAGCCGTTATAAA CGCCA GGA TGGCG TAAAAACCACCGATG TERM 4463 3461794 - 3461783 - g 85 -4.4 -5.24003 | overlap 3461785 AATAAAAACCAAAAA GTCA ATGA TGAC GCGCTCATCGTTGGA CKO_03722 3460790 - 3461827 + | hypothetical protein CKO_03723 3461838 - 3462614 + | hypothetical protein CKO_03724 3462620 - 3462853 + | hypothetical protein TERM 4464 3462831 - 3462846 + T 93 -10.4 -4.67353 | ATCCGGCATTACTAC CGGGCA TCCC TGCCCG TTTTTAACTCAGTAC TERM 4465 3462960 - 3462975 + T 93 -10.4 -4.65895 | ATCCGGCATTACTAC CGGGCA TCCC TGCCCG TTTTTAACTCAGAAG CKO_03725 3465194 - 3462984 - | hypothetical protein TERM 4466 3464450 - 3464460 + gT 80 -4.6 -5.01535 | GCCCGAGGGCGGCCA GCGT CGT GCGC TTTTTCTCGTTATCA CKO_03726 3465318 - 3465169 - | hypothetical protein TERM 4467 3465239 - 3465225 - GH 85 -4.2 -5.2422 | opp_overlap 3465224 3465225, overlap 3465236 AAGGACACGAAAAAA CCCGTT TAA AATGGG GTTTTATTGAATGAA CKO_03728 3465548 - 3466600 + | hypothetical protein TERM 4468 3466635 - 3466607 - T 84 -10.3 -3.86266 | opp_overlap 3466607 3466608 3466609 3466615, overlap 3466608 ATACGATGAGAATAA CGCGAGAAGAACG TCG CGTTCTTCTCGTC TTCTCAGAGTAATGT TERM 4469 3466608 - 3466635 + T 90 -13.6 -3.3197 | gap 1, opp_overlap 3466607 3466608, overlap 3466607 3466609 3466615 TACGATGAGAATAAC G-CGAGAAGAACG TCG CGTTCTTCTCGTC TTCTCAGAGTAATGT TERM 4470 3466634 - 3466608 - T 84 -13.8 -2.91036 | opp_overlap 3466607 3466608 3466609 3466615, overlap 3466607 TACGATGAGAATAAC GCGAGAAGAACG TCG CGTTCTTCTCGT CTTCTCAGAGTAATG TERM 4471 3466609 - 3466633 + T 100 -17.3 -3.22653 | opp_overlap 3466608 3466607, overlap 3466607 3466608 3466615 ACGATGAGAATAACG CGAGAAGAACG TCG CGTTCTTCTCG TCTTCTCAGAGTAAT CKO_03729 3467058 - 3466639 - | hypothetical protein TERM 4472 3467076 - 3467101 + r 79 -8.9 -4.08216 | opp_overlap 3467079, overlap 3467077 AGAGTCCCTTTTAAC TCAGGCGGGTT TTAC AACCCGCCCGC TTTTACGCCCGATAA TERM 4473 3467077 - 3467100 + r 80 -12.4 -3.04715 | opp_overlap 3467079, overlap 3467076 GAGTCCCTTTTAACT CAGGCGGGTT TTAC AACCCGCCCG CTTTTACGCCCGATA TERM 4474 3467098 - 3467079 - R 83 -13.6 -2.52464 | opp_overlap 3467077 3467076 GTCCCTTTTAACTCA GGCGGGTT TTAC AACCCGCC CGCTTTTACGCCCGA CKO_03730 3467868 - 3467104 - | hypothetical protein TERM 4475 3467659 - 3467629 - G 100 -14.6 -4.15788 | opp_overlap 3467627 3467629 3467630, overlap 3467630 AATGCCGCCAAGAAA CGCCGCGCCCTGCG CAA CGCACCGCGCGGCA TCTTCCTCATTCGTT TERM 4476 3467629 - 3467659 + g 78 -12.4 -3.21342 | opp_overlap 3467629 3467630, overlap 3467627 3467630 AATGCCGCCAAGAAA CGCCGCGCCCTGCG CAA CGCACCGCGCGGCA TCTTCCTCATTCGTT TERM 4477 3467630 - 3467658 + g 85 -15.9 -2.52082 | opp_overlap 3467629 3467630, overlap 3467629 3467627 ATGCCGCCAAGAAAC GCCGCGCCCTGCG CAA CGCACCGCGCGGC ATCTTCCTCATTCGT TERM 4478 3467658 - 3467630 - G 93 -15.9 -3.08991 | opp_overlap 3467630 3467629 3467627, overlap 3467629 ATGCCGCCAAGAAAC GCCGCGCCCTGCG CAA CGCACCGCGCGGC ATCTTCCTCATTCGT CKO_03731 3469860 - 3467986 - | hypothetical protein CKO_03732 3470980 - 3469937 - | hypothetical protein TERM 4479 3471312 - 3471350 + r 72 -10.4 -2.79492 | gap 2, opp_overlap 3471312 3471316, overlap 3471311 GGGGGAGTCAGTCAA CG-C-AGGAGTGCCGTCG TTATC TGGCGGCACTCCTTGACG CTTTACCGTTCAGAG TERM 4480 3471344 - 3471316 - R 76 -11.7 -2.55213 | opp_overlap 3471312 3471311, overlap 3471312 GAGTCAGTCAACGCA GGAGTGCCGTC GTTATCT GGCGGCACTCC TTGACGCTTTACCGT CKO_03733 3472816 - 3471353 - | hypothetical protein TERM 4481 3472328 - 3472289 - G 89 -13.4 -3.63068 | gap 1, opp_overlap 3472315 3472319, overlap 3472279 3472282 GGACATCACGGTAAA CGCCG-GGAGACCCGCCGC TCT GCGGCGCGCCAGCGCGGCG ACAATAACGCCCGGC TERM 4482 3472843 - 3472885 + r 77 -12 -2.89881 | gap 1, opp_overlap 3472842 3472841 CTGTATAAAAAGAGG GATTGGCGGCAGC-AGGCC TATTGC GCCCTTGCTGCCGCCAGGC TGTATCAGCTCAGTA CKO_03734 3474434 - 3472890 - | hypothetical protein TERM 4483 3474364 - 3474332 - G 72 -2.6 -4.84311 | gap 1 TGGTATAGAAGAAAA GCAGC-CAGGCACCG ATAA CGGTAAATGCGCCGC CCCCCATGATATCCG CKO_03735 3475864 - 3474455 - | hypothetical protein TERM 4484 3475116 - 3475080 - G 72 -12.1 -2.66964 | overlap 3475077 3475102 TCACTCAGCACATCA CCTGCCAGTCGGCGCTG GAA CAGCGCGGCCTGCCCGG CAGCATCAAGCGGGC TERM 4485 3475215 - 3475191 - G 91 -7.2 -5.00616 | gap 2, overlap 3475195 GTGCTGTGGAAAAAA TCGACGCGCGCT TCA AGCGC-CG-CGA GAAACTCATTCAGAG TERM 4486 3475666 - 3475684 + g 83 -10.2 -3.99324 | GCTCGGGTATGCCAT TGGCGCGC ATC GCCCGCCA TTTATAATGGTCCCC TERM 4487 3476185 - 3476155 - H 74 -5.5 -4.73108 | overlap 3476157 3476158 3476171 TTTACAAAATTAAAA CACTTACCGGAAA TAAGC TTTCCAGTAAAAG CTTCCCCTTAACGGA TERM 4488 3476396 - 3476386 - g 70 -3.2 -4.7219 | CACAGGAAGACAAAA TCCC GTT GGAA TACATTCGCCAGGTG TERM 4489 3476886 - 3476897 + G 75 -3.6 -4.93877 | GATGACGACAAGCTG CGGG AAAA CCTG TTTTATTTCCTCCGG CKO_03736 3476343 - 3477407 + | mannonate dehydratase CKO_03738 3477545 - 3477375 - | hypothetical protein TERM 4490 3477444 - 3477459 + gF 91 -7.5 -4.87291 | opp_overlap 3477444 TAACGAGATAAAAAA CCCGC CATTTT GCGGG TTTTTACTTGCCGTA TERM 4491 3477459 - 3477444 - Gf 100 -7.5 -5.42131 | opp_overlap 3477444 TAACGAGATAAAAAA CCCGC CATTTT GCGGG TTTTTACTTGCCGTA CKO_03737 3477540 - 3477794 + | hypothetical protein TERM 4492 3478837 - 3478825 - g 75 -6.9 -4.42464 | AATTTCGCAAACAAA CCACC AAA GGCGG AAAAGTTGAAAACCG CKO_03739 3477870 - 3479852 + | hypothetical protein TERM 4493 3479879 - 3479856 - f 72 -10.2 -2.75957 | TATCAATGGTAATCA CCCGCCCCGG TTCG CCGGGGCAAA CACTGGAAGGAAGAG TERM 4494 3480260 - 3480240 - g 83 -10.3 -4.04806 | TTCCACATTAAAGAA GCGACCGCC CGC GGCGAGCGC CAGAGCATTCAATTC CKO_03740 3479898 - 3480926 + | hypothetical protein TERM 4495 3481330 - 3481277 - g 71 -7.2 -3.97947 | gap 1 GTCATTGACGAGAAA GTGCAGGTCATCGCCAAC-GCCACC GACCG GGTGGCTGAAGGCGAGGCGCTGCGC CAGACGCTGAATAAA CKO_03741 3480923 - 3481744 + | hypothetical protein TERM 4496 3482457 - 3482507 + G 93 -11.1 -4.45485 | gap 1, overlap 3482462 3482494 GCGAATCCTGCTGAT CTGTAGCGCGTTGCTGGTGGCGGC GGCT GTCGCCGTCAGCGGCGTGAT-CGG TTTTATCGGTCTGGT TERM 4497 3482462 - 3482503 + G 76 -12.9 -2.80791 | overlap 3482457 3482494 TCCTGCTGATCTGTA GCGCGTTGCTGGTGGCGGC GGCT GTCGCCGTCAGCGGCGTGA TCGGTTTTATCGGTC CKO_03742 3481744 - 3482736 + | hypothetical protein CKO_03743 3482729 - 3483508 + | hemin importer ATP-binding subunit TERM 4498 3483546 - 3483517 - f 89 -11.5 -4.19238 | gap 1, opp_overlap 3483537 GCCTTAACCGGAAAA TGCCGGATAGCGGC TTC GCCT-TATCCGGCA GACAATTCTGCGGAG TERM 4499 3484240 - 3484227 - g 77 -8.1 -4.19506 | opp_overlap 3484226 3484227 ACGGCAACTGGAAAA CACGC CTCG GCGTG ATTCTGGCGACAGGC CKO_03744 3483614 - 3484567 + | hypothetical protein CKO_03745 3484719 - 3486308 + | sensory histidine kinase DcuS CKO_03746 3486305 - 3487024 + | DNA-binding transcriptional activator DcuR CKO_03747 3487149 - 3486994 - | hypothetical protein TERM 4500 3487039 - 3487029 - G 70 -5.4 -4.4648 | ATTGCCAGTAGAAAA GAAG CCG CTTC GCATTATGCGTTATA CKO_03748 3487622 - 3488962 + | anaerobic C4-dicarboxylate transporter TERM 4501 3488970 - 3489001 + F 93 -15.8 -2.91681 | opp_overlap 3488968 3488965, overlap 3488973 TCCTGTAACAGCACC TTGCGTGCCGCCCG TTAT CGCGCGGCACGCCA TCTATACAATTCAAA CKO_03749 3489049 - 3490695 + | hypothetical protein TERM 4502 3490702 - 3490725 + G 100 -13.8 -4.88295 | opp_overlap 3490697 GCGAAATAACCTGCC CGGCCCGGCG ATCC TGTCGGGCCG TTTTTCCCTTTATTT CKO_03750 3490674 - 3490847 + | hypothetical protein TERM 4503 3490930 - 3490916 - g 73 -5.6 -4.56775 | overlap 3490918 AGCGCGTTTTAAAAA GACCGA CCC TCGGAC ACATTACCTGGCTGT CKO_03751 3490894 - 3492537 + | putative cell division protein CKO_03752 3492534 - 3493202 + | DNA-binding transcriptional regulator BasR TERM 4504 3493524 - 3493512 - g 73 -5.5 -4.59773 | overlap 3493514 GCCGACCTGCAAAAA GAGCT GGA AGCCC GCACGGCCGATAACC CKO_03753 3493233 - 3494288 + | sensor protein BasS/PmrB TERM 4505 3494401 - 3494376 - T 79 -12.7 -2.78384 | gap 1 CGCGTTTTCATCACA CTCTCCTCC-GA TGG TCTGGAGGAGAG TATGCCTGACGAAGA TERM 4506 3494543 - 3494520 - T 90 -13.8 -3.30124 | opp_overlap 3494515 3494515 CTGTAGGCCTGATAA GCGCAGCGCC ATCA GGCGGTGCGC TAAAGCTTACTCGTC CKO_03754 3496052 - 3494550 - | proline/glycine betaine transporter CKO_03756 3496632 - 3496480 - | hypothetical protein CKO_03755 3496348 - 3496557 + | hypothetical protein TERM 4507 3496533 - 3496547 + gF 73 -5.8 -4.43477 | opp_overlap 3496533 3496532 TGTGATGAAGATAAC TAAAAC AGT GTTTTA TTTTGATTGAATCAA TERM 4508 3496843 - 3496864 + G 78 -6.5 -4.5287 | gap 1, opp_overlap 3496838 3496841, overlap 3496844 CAATTTTAAATACCC T-GGCCCCGG ATA CCGGCGCCTA TTTTGGTTCATTTAC TERM 4509 3496844 - 3496862 + G 82 -11.6 -3.85947 | opp_overlap 3496838 3496841, overlap 3496843 AATTTTAAATACCCT GGCCCCGG ATA CCGGCGCC TATTTTGGTTCATTT TERM 4510 3497068 - 3497083 + G 71 -7.5 -3.93695 | opp_overlap 3497068, overlap 3497056 3497055 3497077 ATACCGGTATTCAAA CCGGC TTCTTC GCCGG TTTGTCCGTACTGGC CKO_03757 3496761 - 3497759 + | 2-keto-3-deoxygluconate permease CKO_03758 3498670 - 3497777 - | hypothetical protein TERM 4511 3498407 - 3498433 + g 78 -6.5 -4.57341 | overlap 3498408 GCGCGTCAGCGCCAG ATGGCCGGGAT CGAGC ATCCCCGCCAG TTTTTCCACCAGCTT TERM 4512 3498408 - 3498432 + g 70 -10 -3.33922 | overlap 3498407 CGCGTCAGCGCCAGA TGGCCGGGAT CGAGC ATCCCCGCCA GTTTTTCCACCAGCT CKO_03760 3501021 - 3498667 - | hypothetical protein TERM 4513 3498904 - 3498871 - GH 74 -2.3 -5.08011 | overlap 3498861 AAAATCGGCAAAAAA GGTCGCCATACCTGC CGTA ACAGAAACATCGACC TGGGCATCTAAAGCT TERM 4514 3499073 - 3499102 + gH 82 -12.1 -3.40403 | gap 1, opp_overlap 3499057 GTGTCGCGCACGCCG CCCG-CGCGAGGCG CGG CGCCTTCCGGCGGG TTCTCCTGAGCGACC TERM 4515 3500585 - 3500597 + gH 72 -9.1 -3.65529 | TCGCACGCCTGCATA CGCTG TTG CAGCG TTTGCATGAGCGTAT CKO_03761 3501169 - 3501074 - | hypothetical protein CKO_03759 3501014 - 3501142 + | hypothetical protein CKO_03763 3501399 - 3501238 - | hypothetical protein TERM 4516 3501394 - 3501406 + Gg 76 -3.3 -5.03747 | overlap 3501395 AATTGCGGCCTTTTT CGGCA ATC TGCCA TTTTTTGGGCGCTTT CKO_03762 3501373 - 3501789 + | hypothetical protein TERM 4517 3502016 - 3502004 - g 77 -7.7 -4.37658 | AACTCCTCTATAAAA TCACC TTT GGTGA AATGCCCCCGCCAGA CKO_03764 3501910 - 3502356 + | hypothetical protein TERM 4518 3502385 - 3502358 - f 71 -7.7 -3.88766 | gap 1, opp_overlap 3502360 3502362, overlap 3502359 3502362 AGCCGACAGAGTAAA CCG-ACGGGAGG CGCGC CCTCCCGTGCTG TCATCGAAGCCCCTT TERM 4519 3502380 - 3502362 - f 76 -11.7 -2.70315 | opp_overlap 3502360 3502362, overlap 3502359 3502358 GACAGAGTAAACCGA CGGGAGG CGCGC CCTCCCG TGCTGTCATCGAAGC TERM 4520 3502362 - 3502380 + F 76 -11.7 -2.66316 | opp_overlap 3502362 3502359 3502358, overlap 3502360 GACAGAGTAAACCGA CGGGAGG CGCGC CCTCCCG TGCTGTCATCGAAGC CKO_03765 3502489 - 3503277 + | phosphonate/organophosphate ester transporter subunit CKO_03766 3503295 - 3504317 + | hypothetical protein CKO_03767 3504422 - 3505201 + | hypothetical protein TERM 4521 3505411 - 3505458 + G 71 -10.4 -3.17392 | CTCGTGGAGCGCGGT TGGGTGCAGCGTCGCCAGGGCG TCGG CGTGCTGGTGCTGATGCGCCCG TTCGATTACCCGCTC CKO_03768 3505216 - 3505947 + | putative transcriptional regulator CKO_03769 3505952 - 3506404 + | hypothetical protein TERM 4522 3506670 - 3506629 - g 75 -12.6 -2.61383 | gap 3, opp_overlap 3506664, overlap 3506628 ATTGCCAGTCAGAAC CTGC-GCT-TTCACACCAGCG CGC CGCTGGT-TGAACAGCCGCAG CAGGCCGCCTTTGCC CKO_03770 3506401 - 3506985 + | carbon-phosphorus lyase complex subunit TERM 4523 3507400 - 3507447 + G 81 -2.5 -5.39721 | gap 2, opp_overlap 3507400 TGGCGAACGGCGAAA CG-CCGCCGCTGCGTACCGC-TG ACGC CATGCAGGACGCCGCGCCGCACG TTTTTTCTCTGCTGG TERM 4524 3507536 - 3507494 - g 73 -10.5 -3.40498 | gap 1, opp_overlap 3507496 3507497, overlap 3507492 3507496 3507497 GAAGCGTGAAGAAGA CAGCGGCGCCGTGCCGGATG ACAT CACCCG-CACGCCGCCGGTT TACCCTTGTTCGCGC TERM 4525 3507534 - 3507496 - g 83 -13.1 -3.26712 | gap 1, opp_overlap 3507496 3507497, overlap 3507494 3507492 3507497 AGCGTGAAGAAGACA GCGGCGCCGTGCCGGATG ACAT CACCCG-CACGCCGCCGG TTTACCCTTGTTCGC TERM 4526 3507496 - 3507534 + G 76 -10.9 -3.72051 | gap 1, opp_overlap 3507496 3507494 3507492 3507497, overlap 3507497 AGCGTGAAGAAGACA GCGGCGCCGTGCCGGATG ACAT CACCCG-CACGCCGCCGG TTTACCCTTGTTCGC TERM 4527 3507533 - 3507497 - g 89 -16.6 -2.55545 | gap 1, opp_overlap 3507496 3507497, overlap 3507496 3507494 3507492 GCGTGAAGAAGACAG CGGCGCCGTGCCGGATG ACAT CACCCG-CACGCCGCCG GTTTACCCTTGTTCG TERM 4528 3507497 - 3507533 + G 83 -14.4 -2.82749 | gap 1, opp_overlap 3507497 3507496 3507494 3507492, overlap 3507496 GCGTGAAGAAGACAG CGGCGCCGTGCCGGATG ACAT CACCCG-CACGCCGCCG GTTTACCCTTGTTCG CKO_03771 3506985 - 3508052 + | hypothetical protein CKO_03772 3508042 - 3508890 + | hypothetical protein TERM 4529 3509050 - 3509070 + G 81 -8.2 -4.36914 | CCATCTCCTCGCGCC TGACGCCG CAGTC CGGCGACA TTTTGTACCAGAACC CKO_03773 3508887 - 3509645 + | phosphonates transport ATP-binding protein TERM 4530 3509821 - 3509797 - g 74 -7.1 -4.30034 | AAAACGTCAGTAAAA CCTTTGTGCTG CAC CAGCAAAATGG CGTGCGCCTGCCGGT TERM 4531 3510233 - 3510257 + G 71 -7.7 -3.99405 | overlap 3510234 TTCCGGCGGCGAGCA GCAGCGCGTGA ATA TCGCGCGCGGG TTTATCGTCGATTAC TERM 4532 3510234 - 3510256 + G 71 -11.2 -2.99161 | overlap 3510233 TCCGGCGGCGAGCAG CAGCGCGTGA ATA TCGCGCGCGG GTTTATCGTCGATTA TERM 4533 3510341 - 3510320 - g 78 -6.5 -4.62336 | gap 1, opp_overlap 3510322 3510326 ACTGGACGCCAAAAA CAGCGCCGCC GTG GTCG-CGCTG ATTGAAGAAGCCAAA TERM 4534 3510367 - 3510357 - g 71 -8.2 -3.8579 | opp_overlap 3510326, overlap 3510358 ATTGAAGAAGCCAAA GCGC GCG GCGC GGCGATTGTCGGCAT CKO_03774 3509769 - 3510449 + | hypothetical protein TERM 4535 3510830 - 3510815 - g 74 -8.2 -3.97602 | GAAGAGACGCAGAAA CGCGGC GTTA ACCGCG CCGAACACCGTCTGC CKO_03775 3510446 - 3511582 + | hypothetical protein CKO_03776 3511585 - 3512139 + | ribose 1,5-bisphosphokinase CKO_03777 3512126 - 3512560 + | aminoalkylphosphonic acid N-acetyltransferase CKO_03778 3512931 - 3512659 - | hypothetical protein CKO_03779 3512947 - 3513327 + | hypothetical protein TERM 4536 3513328 - 3513371 + T 70 -8.8 -3.30159 | gap 1, overlap 3513329 3513344 ATTGTACTGGAGTAG CCTTACGCCGGATGGCGGCGC ATT GCGCC-TTATCCGGCCTACGA TTGTCGCGCGGTTAA TERM 4537 3513329 - 3513370 + T 78 -12.3 -2.57881 | gap 1, overlap 3513328 3513344 TTGTACTGGAGTAGC CTTACGCCGGATGGCGGCGC ATT GCGCC-TTATCCGGCCTACG ATTGTCGCGCGGTTA TERM 4538 3513344 - 3513356 + T 77 -10.5 -3.30124 | overlap 3513329 3513328 CTTACGCCGGATGGC GGCGC ATT GCGCC TTATCCGGCCTACGA CKO_03780 3513715 - 3513383 - | hypothetical protein CKO_03781 3514447 - 3513785 - | hypothetical protein CKO_03782 3515048 - 3514593 - | ribose-5-phosphate isomerase B TERM 4539 3515004 - 3514988 - G 83 -9.5 -4.09739 | TTAAGTGCGTCAAAA TATCCTG TTT CAGGATA AAACCAACGTGATCA CKO_03783 3515194 - 3515364 + | hypothetical protein CKO_03784 3515402 - 3516292 + | DNA-binding transcriptional repressor RpiR TERM 4540 3516514 - 3516500 - g 85 -7.1 -4.92777 | AAGATGAAGCAAAAA CGCTG GGTGT CAGCG TCGATATTTTTGCCT CKO_03785 3516346 - 3517281 + | D-allose transporter subunit TERM 4541 3518562 - 3518546 - g 74 -2.2 -5.0133 | overlap 3518548 GACGCGGTGAAAAAA GGGATG GCTTA CATCAC CGAAAGCCGCCGGGA CKO_03786 3517532 - 3519064 + | D-allose transporter ATP-binding protein CKO_03787 3519043 - 3520023 + | D-allose transporter subunit TERM 4542 3520516 - 3520494 - g 70 -5.4 -4.39002 | overlap 3520495 AAATGCTGGATAAAA TCGCCGAGCT GAA AGCCTGGCGC GAGCGTGAAGGGCTG CKO_03788 3520061 - 3520729 + | allulose-6-phosphate 3-epimerase TERM 4543 3520744 - 3520768 + G 95 -10.8 -4.65895 | overlap 3520745 GCGTTGTGGCGGGTG TGGATATGGG GGCAA CCCATATCCG TTTTTGCCTGCAAAC TERM 4544 3520745 - 3520767 + G 80 -12.1 -3.39216 | overlap 3520744 CGTTGTGGCGGGTGT GGATATGGG GGCAA CCCATATCC GTTTTTGCCTGCAAA TERM 4545 3521024 - 3521045 + G 70 -6.5 -4.07885 | gap 1, overlap 3521025 GGGAAAACTGGAGGA TGCG-CTGGG CTG CCCGGTCGCG TTTTCCCGCGACGTG TERM 4546 3521596 - 3521608 + G 73 -5.5 -4.57353 | overlap 3521579 3521597 AGGGCGCAGCAACGC TGGCA CGC TGCCG TTTTCTGTCGTCGCG CKO_03789 3520713 - 3521627 + | D-allose kinase TERM 4547 3521616 - 3521638 + T 73 -9.8 -3.30124 | overlap 3521617 CGCTGCCGTTTTCTG TCGTCGCGGT GAT ATCGCGACGC TTATCAGGCCTGCAC TERM 4548 3521617 - 3521637 + T 80 -13.3 -2.57931 | overlap 3521616 GCTGCCGTTTTCTGT CGTCGCGGT GAT ATCGCGACG CTTATCAGGCCTGCA CKO_03790 3523924 - 3521642 - | hypothetical protein TERM 4549 3522782 - 3522800 + g 85 -6.7 -4.86731 | ACGCTCCGTTCGGTC GATCTCC ATCTG GGAGGTC TTTTCTTTCAGCAGG TERM 4550 3523886 - 3523862 - G 79 -2.8 -5.23316 | gap 1, overlap 3523864 3523865 CAGCAGATTAAAAAA CAGCAGT-CGC CCGC GCGCACTGGCG AAAAAGTGACGTCTG TERM 4551 3524060 - 3524080 + G 70 -6.9 -4.09685 | opp_overlap 3524061, overlap 3524061 CTGGAGATGCGCAAT ATTGCCAAA GCG TTTGGCAAA TTTTACGCGCTGAAA CKO_03791 3523969 - 3524124 + | hypothetical protein TERM 4552 3524411 - 3524401 - gf 71 -6.8 -4.11216 | GTTGCAGGCGCAAAA GGTC ATC GACC GGCTCGGCGCGCAGT CKO_03792 3524027 - 3525547 + | hypothetical protein TERM 4553 3525626 - 3525640 + G 81 -8.6 -4.32034 | ATCTGATGCAAACGG TCGGTA TTT TACCGA TTTTAGTGCTGATCG TERM 4554 3525809 - 3525835 + G 76 -12.2 -3.02471 | overlap 3525812 TGGGGTCGATTCTCG GCACCACCGCCG TGG CGGCGATGGTGG TCTCTCTGATACCGG TERM 4555 3525812 - 3525832 + G 76 -12.5 -2.73771 | overlap 3525809 GGTCGATTCTCGGCA CCACCGCCG TGG CGGCGATGG TGGTCTCTCTGATAC TERM 4556 3525934 - 3525945 + G 77 -7.2 -4.31433 | overlap 3525918 3525931 CTGGTGGCCTTCGCC GGGC TGCC GCCC TTTATTGTCACGCTC CKO_03793 3525544 - 3526539 + | hypothetical protein CKO_03795 3526695 - 3526567 - | hypothetical protein TERM 4557 3526850 - 3526827 - gH 74 -7.4 -4.09685 | gap 1, opp_overlap 3526819, overlap 3526831 GGTGATGGCGTAAAA GT-GACGCTGG TCT CCAGCGGCTAC GATCTGGGTCAGCAG TERM 4558 3526845 - 3526831 - gH 73 -11.4 -2.74784 | opp_overlap 3526819, overlap 3526827 ATGGCGTAAAAGTGA CGCTGG TCT CCAGCG GCTACGATCTGGGTC CKO_03794 3526641 - 3527582 + | hypothetical protein TERM 4559 3527738 - 3527728 - g 75 -6.8 -4.41616 | ACGCTCCGAAATAAA CGAG ATT CTCG GCCACACGCGGCAAT CKO_03796 3527639 - 3528388 + | hypothetical protein CKO_03797 3528403 - 3529263 + | hypothetical protein TERM 4560 3530089 - 3530116 + G 95 -5.5 -5.38047 | overlap 3530090 3530091 AGATTGTCGGTAGCG TTGGCGCGGGA GATGCG TTCTGCGCCGG TTTTTTGTATGGCTG CKO_03798 3529263 - 3530255 + | hypothetical protein TERM 4561 3530277 - 3530310 + T 90 -13.3 -3.53444 | gap 1, opp_overlap 3530297 3530307, overlap 3530286 AGCCTGATGGCGCTA CG-CTTATCAGGCCTA CAG TAGGCCGGATAAGGCG TTTACGCCGCCATCC CKO_03799 3531074 - 3530343 - | hypothetical protein CKO_03801 3531416 - 3531174 - | hypothetical protein CKO_03802 3531810 - 3531400 - | hypothetical protein CKO_03800 3531364 - 3531783 + | hypothetical protein TERM 4562 3532112 - 3532077 - g 74 -4.7 -4.69053 | gap 1, opp_overlap 3532099 CATTATTGAAGAAAA TCTGTACGACCAGGCG TTCGT CGCCTC-CCGTACTGA AGGCTTTGAAGAGTA TERM 4563 3532678 - 3532667 - g 77 -7.2 -4.30576 | opp_overlap 3532667 TCTTTATGACCAAAA CCGC GTCG GCGG CGGATGTTATTTTAC TERM 4564 3533508 - 3533483 - g 70 -6.7 -4.21098 | opp_overlap 3533482 3533507 ACAGCAAGCTGAAAA CCCGTCTGCGC GAAA GCGCAATGGGG TAATCTGCCGGATGG CKO_03803 3531832 - 3533511 + | hypothetical protein TERM 4565 3533616 - 3533634 + F 100 -14.6 -5.64274 | opp_overlap 3533618 ACATTTTCCTTGCAA CAGCCTCC GCC GGAGGCTG TTTTTTTATCCATAC TERM 4566 3533632 - 3533618 - f 75 -11.4 -3.01791 | opp_overlap 3533616 ATTTTCCTTGCAACA GCCTCC GCC GGAGGC TGTTTTTTTATCCAT CKO_03804 3533694 - 3534383 + | hypothetical protein CKO_03805 3535836 - 3534487 - | glutamate/aspartate:proton symporter CKO_03806 3535880 - 3536014 + | hypothetical protein CKO_03807 3536848 - 3536147 - | formate-dependent nitrite reductase complex subunit NrfG CKO_03808 3537340 - 3536849 - | formate-dependent nitrite reductase complex subunit NrfF CKO_03809 3539000 - 3537333 - | heme lyase subunit NrfE TERM 4567 3537562 - 3537550 - G 75 -6.2 -4.56597 | opp_overlap 3537550 CGCGCCGCGTAAAAA CGCC GCTCT GGCG TGACGCGCCCGATGT TERM 4568 3537995 - 3537983 - G 71 -4.7 -4.57569 | overlap 3537965 GCACGGCGCTAAAAA GCAGC AGC GCGGC CAGAATCATCATCTC TERM 4569 3538703 - 3538689 - G 77 -11.4 -3.60296 | opp_overlap 3538687 3538684 GAGCGTTAGCGGAAA GAGCGC ATC GCGCTC GCCTTTGCACCGCCA CKO_03810 3540035 - 3539079 - | hypothetical protein CKO_03811 3540703 - 3540032 - | hypothetical protein TERM 4570 3540604 - 3540618 + g 77 -8.6 -4.07568 | TGCCGTAACGCACGC CGTTGA TAT TCAACG TTTTCGCCACCACGC CKO_03812 3541272 - 3540700 - | cytochrome c-type protein NrfB CKO_03814 3542749 - 3541313 - | cytochrome c nitrite reductase TERM 4571 3542764 - 3542792 + Gr 80 -4.6 -5.098 | gap 1, overlap 3542768 3542769 TAGAGGTCTCATCCA GATTGCGCCATTG CCTT CAATGGCG-GTTC TTTATTTTGTTTTTC TERM 4572 3542768 - 3542789 + Gr 89 -8.7 -4.53966 | overlap 3542764 3542769 GGTCTCATCCAGATT GCGCCATTG CCTT CAATGGCGG TTCTTTATTTTGTTT TERM 4573 3542769 - 3542788 + Gr 81 -12.2 -3.28719 | overlap 3542768 3542764 GTCTCATCCAGATTG CGCCATTG CCTT CAATGGCG GTTCTTTATTTTGTT CKO_03815 3542873 - 3542757 - | hypothetical protein CKO_03813 3542640 - 3542876 + | hypothetical protein TERM 4574 3542884 - 3542868 - Gf 91 -3.7 -5.45652 | opp_overlap 3542871, overlap 3542871 ATGTGTAACAAAAAA CCACATT AAA AATGTTG TCTTTAATCAATTGT TERM 4575 3543467 - 3543451 - g 71 -4.3 -4.64676 | overlap 3543452 CCATCTGCAAGAAAA CGGCGAC CGT ACCGCCA TCATCTGGGAAGGCG TERM 4576 3543512 - 3543533 + G 70 -6.6 -4.13654 | overlap 3543514 3543529 AGCAAACACATTTCA TATCGCGA ATTGCA TCGCGATG TTTGTCGTTTCGCCA TERM 4577 3544418 - 3544403 - g 72 -2.5 -4.86621 | overlap 3544405 ATCGGTAACGAAAAA TGCCC GGTAGT GGACA CCTGGTGGCAGACCG CKO_03816 3543185 - 3545143 + | acetyl-CoA synthetase TERM 4578 3545358 - 3545343 - g 73 -5.4 -4.62783 | overlap 3545344 GAGTTAGTCGAAAAA CGGCAA CGGT TTGCCA CCATCCTGTCGGTCA CKO_03817 3545157 - 3545594 + | hypothetical protein CKO_03818 3545591 - 3547240 + | acetate permease CKO_03819 3547969 - 3547280 - | hypothetical protein CKO_03820 3548372 - 3547962 - | hypothetical protein CKO_03821 3548476 - 3549363 + | hypothetical protein TERM 4579 3549393 - 3549364 - T 72 -8.6 -3.75105 | opp_overlap 3549363 3549384 TTAACGCAGGAATAA CGCCT-CGCTCGCC GGAT GGCG-GCGCAAGCG CCTTATCCGGCCTAC CKO_03822 3549531 - 3549349 - | hypothetical protein CKO_03823 3549997 - 3549455 - | hypothetical protein CKO_03824 3551751 - 3550105 - | hypothetical protein TERM 4580 3551864 - 3551883 + r 93 -10.6 -4.56597 | opp_overlap 3551864 TCCTGAAAATAAAAA CGGGCGGC AAAA GCCACCCG TTTTTAGAGGACGCC TERM 4581 3551883 - 3551864 - R 100 -12.8 -5.45802 | opp_overlap 3551864 TCCTGAAAATAAAAA CGGGCGGC AAAA GCCACCCG TTTTTAGAGGACGCC CKO_03825 3553262 - 3551904 - | hypothetical protein CKO_03826 3554246 - 3553578 - | hypothetical protein TERM 4582 3554097 - 3554110 + g 81 -2.4 -5.40072 | AATAACGGGCGATTT TCCA AGCGGG TGGA TTTTTTTCAGCGCCG TERM 4583 3554502 - 3554478 - R 100 -14.4 -4.4572 | opp_overlap 3554478 3554489 AAGACCGGAAACAAA CTAAAGCGCC CTTGC GGCGCTTTAG TTTTATGCGCGGCGA TERM 4584 3554478 - 3554502 + r 100 -14.4 -4.36914 | opp_overlap 3554478, overlap 3554489 AAGACCGGAAACAAA CTAAAGCGCC CTTGC GGCGCTTTAG TTTTATGCGCGGCGA CKO_03827 3555023 - 3554565 - | hypothetical protein CKO_03828 3555110 - 3555433 + | DNA-binding transcriptional regulator SoxS CKO_03829 3557022 - 3555436 - | hypothetical protein TERM 4585 3555500 - 3555490 - G 77 -8.2 -4.2123 | CAGCCACTGAATAAA CGCC TGC GGCG GCATCGCCTTCGCAA CKO_03830 3557599 - 3557880 + | hypothetical protein TERM 4586 3557892 - 3557907 + F 100 -10.4 -5.60689 | opp_overlap 3557892 CTGATGCTGATATAA GCCTCC GCCC GGAGGC TTTTTTATTCTCTCA TERM 4587 3557907 - 3557892 - f 79 -10.4 -3.49475 | opp_overlap 3557892 CTGATGCTGATATAA GCCTCC GCCC GGAGGC TTTTTTATTCTCTCA CKO_03831 3558037 - 3558555 + | RNA polymerase sigma factor FecI CKO_03832 3558552 - 3559508 + | fec operon regulator FecR TERM 4588 3561562 - 3561504 - g 86 -10.4 -4.09685 | gap 1 GCCCACGCTGGAAAA TGTCGCCGTTTACGCTAACTAC-GCGT ACGTTA ACGCCGAAATTCGCGAAAAAGGCGACA CTTACGGCAATCAGG TERM 4589 3561876 - 3561865 - g 75 -5.8 -4.53419 | GACGACAACAACAAA GGCA TCTA TGCC GGACAGCCACGAACG CKO_03833 3559606 - 3561921 + | hypothetical protein CKO_03835 3562105 - 3561926 - | hypothetical protein TERM 4590 3561995 - 3561953 - Gf 100 -15.8 -3.53012 | gap 1 GGGTGGCGGCGTAAA TGC-CTTACCCGGCCTACA GAGTGA CGTAGGCCAGGTAAGCGCA GCGCCATCCGGCAGC TERM 4591 3562064 - 3562076 + Gg 81 -6.9 -4.8048 | overlap 3562070 TTCAGCCTGATCGTC CTGGC AGC GCCGG TTTTTGCTGTGACGG CKO_03834 3562022 - 3562924 + | iron-dicitrate transporter substrate-binding subunit TERM 4592 3563051 - 3563070 + G 95 -15 -3.2115 | overlap 3563039 TGTTTCCTTCTTCAA CGCCTCCG CTTT CGGAGGCG TTGGTGCGTAATTTA TERM 4593 3563809 - 3563860 + G 79 -13.8 -2.71011 | overlap 3563855 3563856 CTGGCGGATATTCTG GCGCGAGTGCTG-GCCTGGCCGGG CGAGCT TCCGG-CAGGCGCAGTGCTGGCGC TGATTGGCGCGCCGT CKO_03836 3562921 - 3563907 + | iron-dicitrate transporter permease subunit TERM 4594 3564051 - 3564080 + G 76 -12.1 -3.14132 | TATGTTCTGACCCAG TATCGCCTGCCGC GACT GCTGCTGGCGATA TTCGTCGGCGCCGCC TERM 4595 3564719 - 3564734 + G 70 -6.8 -4.19624 | GCTACTGCCCGGCGC TGCGCT AATC GGCGCA TTTGTCTTAACGCTG CKO_03837 3563904 - 3564860 + | iron-dicitrate transporter subunit FecD CKO_03838 3564861 - 3565628 + | iron-dicitrate transporter ATP-binding subunit TERM 4596 3565762 - 3565775 + F 72 -5.3 -4.56775 | opp_overlap 3565762 AAGTTATGTAAGGAA CACTA TATT TAGTG TTTTTCAACCCAGGT TERM 4597 3566189 - 3566179 - g 85 -2.4 -5.44119 | overlap 3566180 3566182 3566184 GGTACTTGAAAAAAA GCAG AGT CAGC CTTCCGGGCTGACGC TERM 4598 3566202 - 3566184 - g 73 -10.3 -3.31247 | overlap 3566179 3566182 3566180 TTGAAAAAAAGCAGA GTCAGCC TTCCG GGCTGAC GCAAAATGAAGCCAG CKO_03839 3566093 - 3568801 + | hypothetical protein TERM 4599 3568844 - 3568827 - T 88 -8.4 -4.86621 | opp_overlap 3568827 ACCGCGAAGCAAAAA GCCTCC CGTAGC GGAGGC TTTTTTTTGCCGATG TERM 4600 3568827 - 3568844 + T 100 -8.4 -5.76949 | opp_overlap 3568827 ACCGCGAAGCAAAAA GCCTCC CGTAGC GGAGGC TTTTTTTTGCCGATG TERM 4601 3568919 - 3568891 - T 74 -8.7 -3.90112 | opp_overlap 3568899 3568918, overlap 3568892 GGCCCGGTAAGCAAA GCGCCACCGGGCA TAG CGCCGGATGGCGG CGCAAGCGCCTTATC TERM 4602 3568918 - 3568892 - T 79 -12.2 -2.93853 | opp_overlap 3568899, overlap 3568891 GCCCGGTAAGCAAAG CGCCACCGGGCA TAG CGCCGGATGGCG GCGCAAGCGCCTTAT CKO_03840 3569646 - 3568939 - | hypothetical protein TERM 4603 3569584 - 3569556 - G 73 -8.7 -3.90112 | opp_overlap 3569580, overlap 3569557 GGCCCGGTAAGCAAA GCGCCACCGGGCA TGA CGCCGGATGGCGG CACAAACGCCTTATC TERM 4604 3569583 - 3569557 - G 75 -12.2 -2.93853 | opp_overlap 3569580, overlap 3569556 GCCCGGTAAGCAAAG CGCCACCGGGCA TGA CGCCGGATGGCG GCACAAACGCCTTAT CKO_03841 3570091 - 3569660 - | hypothetical protein TERM 4605 3570339 - 3570323 - R 100 -9.4 -5.81412 | opp_overlap 3570323 TTCAGCCAAAAAAAA GCTCCC GTGAA GGGAGC TTTTTAAATTCATCA TERM 4606 3570323 - 3570339 + r 93 -9.4 -4.7629 | opp_overlap 3570323 TTCAGCCAAAAAAAA GCTCCC GTGAA GGGAGC TTTTTAAATTCATCA CKO_03842 3570888 - 3570352 - | single-strand DNA-binding protein TERM 4607 3571010 - 3571023 + H 72 -6.7 -4.2803 | overlap 3571006 GGGCGGACATTGTTA CACAG TAGC CTGTG TTTTGCATTCCAATA CKO_03843 3571139 - 3573961 + | excinuclease ABC subunit A CKO_03844 3574413 - 3574057 - | hypothetical protein CKO_03845 3575329 - 3574616 - | acid phosphatase/phosphotransferase CKO_03846 3575661 - 3577493 + | hypothetical protein TERM 4608 3577890 - 3577869 - g 86 -9.5 -4.36914 | opp_overlap 3577873, overlap 3577873 TCTGGTGGTAGAAAA CAAACAGCT TCTG AGCCGTTTG CAACAGGAAAAGGGG TERM 4609 3577886 - 3577873 - g 74 -4.5 -4.77173 | opp_overlap 3577873, overlap 3577869 GTGGTAGAAAACAAA CAGCT TCTG AGCCG TTTGCAACAGGAAAA CKO_03847 3577483 - 3578826 + | hypothetical protein CKO_03848 3579901 - 3578828 - | hypothetical protein TERM 4610 3579715 - 3579731 + g 70 -6.5 -4.15543 | overlap 3579722 GGGCATTAACCGTTA CATCACC TCT GGCGATG TTTTCCAGATATTTG CKO_03849 3581388 - 3579913 - | hypothetical protein TERM 4611 3580256 - 3580242 - G 74 -10 -3.63656 | overlap 3580251 AAAACGCAGAGAGAA TGGCGA AGA TCGCCA GAGGCGGCAGCGCAT TERM 4612 3580566 - 3580578 + g 79 -3.3 -5.14965 | CCGTCGTCGGCCCCA GCTCT ACC AGCGC TTTTTTGATAGCGCT TERM 4613 3580713 - 3580733 + g 78 -6.2 -4.71426 | gap 1, opp_overlap 3580713 AGTCTAGCCAACTGA CGTTGTGGC CTGC GCCA-AACG TTTTATTAATGAAGC TERM 4614 3581392 - 3581373 - G 71 -8.6 -3.78793 | CAGAATTAGGAATAA TGCTACGC TTTT GCATAGCA CCATTAGGAACTGAT TERM 4615 3581587 - 3581605 + r 86 -13.1 -3.46824 | opp_overlap 3581587 ACCACACATAAAAAA CGGGGGC TTATT GCCCCCG TTACTTACTTAATCG TERM 4616 3581605 - 3581587 - R 100 -13.1 -5.43414 | opp_overlap 3581587 ACCACACATAAAAAA CGGGGGC TTATT GCCCCCG TTACTTACTTAATCG CKO_03850 3582482 - 3581610 - | hypothetical protein TERM 4617 3581668 - 3581693 + g 71 -6.1 -4.27519 | opp_overlap 3581686, overlap 3581669 TTTCGTGTCCAGGTC ATCCCCGCTTT ATCG AAAGCGCGGAA TTTATCTTCTGCGCT CKO_03851 3583664 - 3582495 - | hypothetical protein CKO_03852 3585166 - 3583748 - | hypothetical protein CKO_03853 3586341 - 3585178 - | hypothetical protein CKO_03854 3589109 - 3586365 - | alpha-ketoglutarate decarboxylase TERM 4618 3587615 - 3587665 + g 90 -5.2 -5.19212 | overlap 3587616 3587619 TGGAATCCGGTGTCG GCAGCGGATCGCGTTTCTGGCAGG CAT CCAGCCAGTCACGGTATTCGTTGA TTTTTTGCTCCTGCT TERM 4619 3587616 - 3587664 + g 70 -8.7 -3.70443 | overlap 3587615 3587619 GGAATCCGGTGTCGG CAGCGGATCGCGTTTCTGGCAGG CAT CCAGCCAGTCACGGTATTCGTTG ATTTTTTGCTCCTGC CKO_03855 3590478 - 3589285 - | aromatic amino acid aminotransferase TERM 4620 3589550 - 3589563 + g 77 -8.1 -4.10161 | ATTGCTTCCACTTCC GCCAG CCAG CTGGC TTTTAGCGCCTCATC TERM 4621 3590574 - 3590588 + rH 70 -9.2 -3.30124 | opp_overlap 3590565 TGAATATCGCCGGAT GGCGGG GTA TCCGCC TTATCCGGCCTGGGA CKO_03857 3591706 - 3590627 - | alanine racemase CKO_03856 3591694 - 3591840 + | hypothetical protein CKO_03858 3593266 - 3591851 - | replicative DNA helicase TERM 4622 3593599 - 3593588 - g 71 -7.2 -3.97308 | opp_overlap 3593587 3593591 3593593, overlap 3593589 GTTAAACATATTAAA GCGG GCGA CCGC GTCGTTTATGCCCAG CKO_03859 3593348 - 3594331 + | quinone oxidoreductase, NADPH-dependent TERM 4623 3594346 - 3594376 + TF 85 -5.6 -5.27477 | gap 2, opp_overlap 3594349 3594350 3594352, overlap 3594352 GTATGACGGGGAAAA GAATTAGGGCTTCC ACATG GGAAGCCCT--TTC TTTTTTAGTTCGGCT TERM 4624 3594374 - 3594350 - Tf 70 -10 -3.10622 | opp_overlap 3594346 3594352, overlap 3594349 3594352 GACGGGGAAAAGAAT TAGGGCTTCC ACATG GGAAGCCCTT TCTTTTTTAGTTCGG TERM 4625 3594352 - 3594372 + TF 100 -12.6 -5.12785 | opp_overlap 3594350 3594349 3594352, overlap 3594346 CGGGGAAAAGAATTA GGGCTTCC ACATG GGAAGCCC TTTCTTTTTTAGTTC TERM 4626 3594372 - 3594352 - Tf 80 -12.6 -3.10579 | opp_overlap 3594352 3594346, overlap 3594350 3594349 CGGGGAAAAGAATTA GGGCTTCC ACATG GGAAGCCC TTTCTTTTTTAGTTC CKO_03861 3594750 - 3594508 - | phage shock protein G TERM 4627 3594882 - 3594859 - gR 100 -13.1 -4.87803 | GATTTGCAAACAAAA CGCCCCGCG ACTGTG CGCAGGGCG TGGTGAAATTGACTA CKO_03860 3594713 - 3594898 + | hypothetical protein CKO_03862 3595950 - 3594913 - | tRNA-dihydrouridine synthase A TERM 4628 3595906 - 3595924 + g 85 -8.9 -4.48877 | TAATTTCTCTGGCAT CACGTTG GTTTG CAACGTG TTTTGTGACTCTTTA TERM 4629 3596169 - 3596188 + r 70 -2.1 -5.01811 | gap 1, overlap 3596172 3596174 CCATCCATGTTATTA CC-ACTCC CCGTA GGGGTAGG TTTTTCCTTTGATAA CKO_03863 3596855 - 3596166 - | hypothetical protein TERM 4630 3596877 - 3596896 + r 70 -2.1 -5.01811 | gap 1, overlap 3596880 3596882 CTGTCCCTGTTATTA CC-ACTCC CCGTA GGGGTAGG TTTTTCCTTTGATAA CKO_03864 3597560 - 3596874 - | hypothetical protein TERM 4631 3597368 - 3597353 - G 71 -7.6 -4.06179 | opp_overlap 3597355, overlap 3597345 TGTAAAAGGTATAAA GATACC CGTC GGTATC AATTACCCGTGCATG CKO_03866 3599539 - 3597557 - | hypothetical protein TERM 4632 3597949 - 3597965 + g 77 -7.9 -4.2349 | opp_overlap 3597932 GCTGGCGCATCGTCA GTGCGGC AAA GCTGCGC TTTTGCATCTGACCA TERM 4633 3598950 - 3598926 - G 74 -7.9 -4.20696 | gap 1, opp_overlap 3598926 3598924 CTATCAATGTCAAAA TGCTGCGCGG TACAAG CCGC-CAGCA TATTTCGCGTATTGA CKO_03868 3600117 - 3599896 - | hypothetical protein CKO_03867 3600056 - 3600571 + | zinc uptake transcriptional repressor TERM 4634 3600606 - 3600577 - TR 72 -5.7 -4.44448 | overlap 3600579 ACCACGTTAAATAAA TCGGGCGGC TAATCCGCAGAC GCCGCCCAA AGCAAGTACGTTGAA CKO_03869 3600877 - 3600665 - | putative stress-response protein CKO_03870 3602331 - 3601012 - | DNA-damage-inducible SOS response protein CKO_03871 3602393 - 3602551 + | hypothetical protein TERM 4635 3602595 - 3602553 - T 74 -8.6 -3.86524 | gap 1, opp_overlap 3602542 3602584, overlap 3602554 3602593 AGATGGCGGCATAAA CGCCTTATCCGGCCTAC GGGGATATTT GTAGGCCTGATAAG-CG CAGCGCCATCAGGCG CKO_03872 3603235 - 3602627 - | LexA repressor CKO_03873 3603727 - 3603359 - | hypothetical protein TERM 4636 3604120 - 3604146 + G 74 -7.2 -4.15044 | opp_overlap 3604127 GAGCCGCTGGAGATC GACGGAACGCTG CTG CCGCGTTATGTC TTTATTCACGGCGGG CKO_03874 3604021 - 3606318 + | glycerol-3-phosphate acyltransferase TERM 4637 3606327 - 3606356 + T 76 -12.1 -2.5955 | gap 1, opp_overlap 3606328, overlap 3606323 CGAGTGACAATAAAA AGCCGGGTGGCGGC TTC GCC-CTACCCGGCC TACATTCTGCGCAAT TERM 4638 3606355 - 3606328 - T 100 -13.4 -5.20333 | gap 1, opp_overlap 3606327 3606323 GAGTGACAATAAAAA GCCGGGTGGCGGC TTC GCC-CTACCCGGC CTACATTCTGCGCAA TERM 4639 3606383 - 3606403 + T 100 -12.6 -5.40072 | CAATATGTTATGTAG GCCCGGTA AGCGC TACCGGGC TTTTTTTCAACCAAC CKO_03875 3607279 - 3606410 - | 4-hydroxybenzoate octaprenyltransferase CKO_03876 3607789 - 3607292 - | chorismate pyruvate lyase TERM 4640 3607440 - 3607452 + g 75 -6.2 -4.61527 | GATGTAAACAGGTAG CGCC CTAAC GGCG TTTTTCCCAGATTTT CKO_03877 3607957 - 3607805 - | hypothetical protein TERM 4641 3607937 - 3607918 - G 100 -11.4 -5.81032 | opp_overlap 3607917 3607916 GAATGCTAAAAAAAA GGTGCGCC AGGA GACGCACC AGTTGTTGCAAAATC CKO_03878 3608912 - 3607971 - | maltose regulon periplasmic protein TERM 4642 3609018 - 3608991 - R 71 -10.6 -2.69319 | gap 1, opp_overlap 3608985, overlap 3608990 AACGGTGCAGATAAT GCCGGATAGCGGC TAC GCCT-TATCCGGC CTGCATCTCGTTACC CKO_03879 3610437 - 3609067 - | maltoporin CKO_03880 3611662 - 3610553 - | maltose/maltodextrin transporter ATP-binding protein TERM 4643 3611457 - 3611425 - G 83 -9.8 -4.16279 | gap 1, opp_overlap 3611425 3611426 3611428, overlap 3611426 3611428 CATAGGACTGGAAAA CCATCCC-CACGCCG CGTT CGGCGGGCGGGATGT CGTTCATACGGGCTT TERM 4644 3611456 - 3611426 - G 84 -13.3 -3.09286 | gap 1, opp_overlap 3611425 3611426 3611428, overlap 3611425 3611428 ATAGGACTGGAAAAC CATCCC-CACGCCG CGTT CGGCGGGCGGGATG TCGTTCATACGGGCT TERM 4645 3611426 - 3611456 + g 79 -13.3 -2.78018 | gap 1, opp_overlap 3611426 3611425 3611428, overlap 3611425 3611428 ATAGGACTGGAAAAC CATCCC-CACGCCG CGTT CGGCGGGCGGGATG TCGTTCATACGGGCT TERM 4646 3611843 - 3611862 + H 72 -2.8 -4.96848 | gap 1 GGAATTTCGTGATGT CACCTGCAA AAA TCGC-GGTG TTTTTATGTGCGCCA CKO_03881 3612025 - 3613224 + | maltose ABC transporter periplasmic protein TERM 4647 3613298 - 3613257 - g 100 -19.7 -3.14881 | gap 1, opp_overlap 3613249 GAATGGCGGCATCAA TGC-CTTCTCCGGCCTAC AGAACAG GTAGGCCGGAGAAGCGCA GCGCCATCAGGCACG CKO_03882 3613235 - 3613366 + | hypothetical protein CKO_03883 3613353 - 3614897 + | maltose transporter membrane protein CKO_03884 3614912 - 3615802 + | maltose transporter permease TERM 4648 3615885 - 3615902 + T 100 -12.7 -5.80364 | TTGTGACTGTTCTTC GGCGCTC CTCG GAGCGCC TTTTTTTATTCCCGT CKO_03885 3616294 - 3615908 - | phosphate-starvation-inducible protein PsiE CKO_03886 3616439 - 3616912 + | hypothetical protein TERM 4649 3616980 - 3616934 - Tf 100 -16.2 -3.53444 | gap 1, opp_overlap 3616926, overlap 3616915 3616953 3616957 GGATGGCGGCGTAAA CGCCTTATCCGGCCTACAA TGGATGCGGT TTGTAGGCCGGATAA-GCG TAGCGCCATCCGGCT CKO_03888 3619106 - 3617010 - | hypothetical protein TERM 4650 3617480 - 3617457 - Gf 84 -10.2 -3.92592 | AGCGTCAAGACCAAA CGCCCAGTTG CTGT CGACCGGGCG ATACAGCACTTCCGC CKO_03887 3619027 - 3619152 + | hypothetical protein CKO_03889 3619843 - 3619106 - | hypothetical protein TERM 4651 3619560 - 3619575 + g 95 -11.8 -4.52589 | AGCGTATTGATTGCG GCGGCG TCAT CGCCGC TTTTCTCTGCGCCAA CKO_03890 3620493 - 3619840 - | hypothetical protein TERM 4652 3620567 - 3620546 - R 95 -11.7 -4.28774 | opp_overlap 3620546 3620549 TCAGGCAAGCTAAAA TAACCACAC CGAA GTGTGGTTA TGATTAAACGTACCG TERM 4653 3620546 - 3620567 + r 76 -11.7 -2.72344 | opp_overlap 3620546, overlap 3620549 TCAGGCAAGCTAAAA TAACCACAC CGAA GTGTGGTTA TGATTAAACGTACCG TERM 4654 3620549 - 3620564 + r 72 -9 -3.51329 | opp_overlap 3620546, overlap 3620546 GGCAAGCTAAAATAA CCACAC CGAA GTGTGG TTATGATTAAACGTA CKO_03891 3620828 - 3620586 - | hypothetical protein TERM 4655 3620789 - 3620819 + g 85 -4.7 -5.14965 | gap 1, opp_overlap 3620798 CAGAAGTCGCCGCAA GCGCAGATATGGCA AAAA TGCCATA-CAGAGC TTTTTTCATCACAAT CKO_03892 3621273 - 3621085 - | hypothetical protein TERM 4656 3621174 - 3621157 - G 100 -9.9 -5.626 | opp_overlap 3621157 TATCTTATAAAAAAA GCCGATA ATAA TATCGGC TCTAATTACAGATAT CKO_03893 3622937 - 3621288 - | glucose-6-phosphate isomerase TERM 4657 3621986 - 3622002 + g 72 -3.5 -4.83169 | overlap 3621981 3621993 AGATACCGATCAGCG CCAGCAG CAC CGGCAGG TTTTTCTCAGCCGGT TERM 4658 3623114 - 3623145 + H 77 -9.4 -3.91897 | opp_overlap 3623114 3623113 3623109 GGCAAGGGAAGAAAT CCCCAGGAGCATAG ATAA CTATGTGACTGGGG TTTCTGAGTGCAGCC TERM 4659 3623989 - 3624032 + G 79 -13.1 -2.87683 | gap 1, opp_overlap 3623990 3624010 GGCGGCAGCGACTAC ACGGCG-GCGCTGCTTGCAG AAGCG CTGCACGCGGCGCGCGTCGA TATCTGGACGGATGT TERM 4660 3624031 - 3623990 - g 72 -12.2 -2.80816 | gap 1, opp_overlap 3623989, overlap 3624010 GCGGCAGCGACTACA CGGCG-GCGCTGCTTGCAG AAGCG CTGCACGCGGCGCGCGTCG ATATCTGGACGGATG CKO_03894 3623368 - 3624729 + | aspartate kinase III TERM 4661 3624760 - 3624777 + F 100 -9.8 -5.28176 | TAAATAATACCTATA GCCGGG CTCGAA CCCGGC TTTTTTATAACTAAA CKO_03895 3624822 - 3625760 + | hypothetical protein CKO_03897 3626066 - 3625815 - | hypothetical protein CKO_03896 3625891 - 3626163 + | hypothetical protein CKO_03898 3627035 - 3626160 - | 23S rRNA pseudouridine synthase F TERM 4662 3627074 - 3627062 - H 70 -9.1 -3.33899 | overlap 3627060 3627058 TAAAAGCGAAATATA CCGCA CCT TGCGG TCAGGGAAAAAGCGT TERM 4663 3627224 - 3627234 + H 82 -5.4 -5.1971 | overlap 3627215 GATGAGCGGTGGTAG CATC ACG GATG TTTTTACTTTTTGAT TERM 4664 3627793 - 3627771 - g 76 -10.6 -3.74347 | overlap 3627765 GTCACAAAGGCGAAA CCCGCGAACA GCG TATTCGCGAG CTGCTGGTGGTCGCG CKO_03899 3627263 - 3627952 + | peptidase E TERM 4665 3628067 - 3628034 - T 71 -10.3 -2.5955 | gap 1, opp_overlap 3627998, overlap 3628030 3628044 AGTGCTTATAACGTA GGCCGGATAA-GGCGT TTC ACGCCGCCATCCGGCA ATCAGCAATCAATAG TERM 4666 3628056 - 3628044 - T 70 -9.1 -3.30243 | opp_overlap 3627998, overlap 3628034 3628030 ACGTAGGCCGGATAA GGCGT TTC ACGCC GCCATCCGGCAATCA CKO_03900 3629632 - 3628076 - | hypothetical protein TERM 4667 3629382 - 3629362 - G 71 -7.5 -4.01454 | overlap 3629357 CCAAAAAGAAGATAA CGCCGATGA AAA TCAGCAGCG GCGATAACCATGACA CKO_03901 3629655 - 3629840 + | hypothetical protein TERM 4668 3629889 - 3629859 - T 84 -8.2 -4.67697 | opp_overlap 3629863, overlap 3629861 3629863 TTTCAAAACAATAAA GAGACAGGGCGCCC GAT GAGCACCCTGTTTG TTGTAAGGAAAAATG TERM 4669 3629887 - 3629861 - T 84 -10.8 -3.93953 | opp_overlap 3629863, overlap 3629859 3629863 TCAAAACAATAAAGA GACAGGGCGCCC GAT GAGCACCCTGTT TGTTGTAAGGAAAAA TERM 4670 3629863 - 3629885 + T 83 -9 -4.30719 | opp_overlap 3629863 3629861 3629859 AAAACAATAAAGAGA CAGGGCGCCC GAT GAGCACCCTG TTTGTTGTAAGGAAA TERM 4671 3629885 - 3629863 - T 90 -13.4 -3.52831 | opp_overlap 3629863, overlap 3629861 3629859 AAAACAATAAAGAGA CAGGGCGCCC GAT GAGCACCCTG TTTGTTGTAAGGAAA CKO_03902 3633661 - 3629918 - | B12-dependent methionine synthase TERM 4672 3631900 - 3631867 - G 83 -12.5 -3.18735 | gap 1, opp_overlap 3631873 GGAACACCGCATGAA TCGCTTCGCG-CACCG GGT CGTTGCCGCGAAACGA GAAGGAGACGTTAGA TERM 4673 3632448 - 3632464 + g 75 -6.5 -4.41237 | opp_overlap 3632414, overlap 3632450 TGCTGGCGGGCGACA TCCAGCG CTT CGCTGTA TTTCTCTTCTTTGAT TERM 4674 3632450 - 3632462 + g 73 -9.1 -3.79177 | opp_overlap 3632414, overlap 3632448 CTGGCGGGCGACATC CAGCG CTT CGCTG TATTTCTCTTCTTTG TERM 4675 3633419 - 3633443 + g 76 -10 -3.77832 | CGCGGTAATCACCTC CGGCTTGCTG AGTAC CAGCAGGTCG TTGTTGCCTTTCAAA CKO_03903 3633799 - 3634623 + | transcriptional repressor IclR CKO_03904 3636434 - 3634707 - | bifunctional isocitrate dehydrogenase kinase/phosphatase protein TERM 4676 3634735 - 3634758 + g 76 -11.8 -3.04263 | opp_overlap 3634733 3634732 CTGAAGCAAAACCGC TGTTTGCGCC GATA GGCGTAAACA TCTTCCACGTGCCCT TERM 4677 3635043 - 3635019 - G 70 -9.9 -3.36671 | opp_overlap 3635029 3635031, overlap 3635022 ATCGTAATCGTAGAA CACCACGCGCC CGT GGCGGGTGACG CCAAAGTTTTTAAAC TERM 4678 3635784 - 3635772 - G 93 -9.1 -4.73388 | AATCGGCAGCAAAAA CGGCA ACG TGCCG GCAGGGGTCAGCAAC TERM 4679 3635862 - 3635835 - G 75 -7.1 -4.38712 | gap 1, opp_overlap 3635815, overlap 3635858 TTTATTGCGATAAAA CAGCTCATTCGC CACCT GCAAATG-GCTG CGGTGCAAAGCCTCC TERM 4680 3636097 - 3636074 - G 90 -5.2 -5.20783 | overlap 3636075 AGCTAAAGATAAAAA GCCGCTCG GGAGTGAG CGAGCGGT GGTCAAATAACCTAC TERM 4681 3636096 - 3636075 - G 70 -8.7 -3.70843 | overlap 3636074 GCTAAAGATAAAAAG CCGCTCG GGAGTGAG CGAGCGG TGGTCAAATAACCTA TERM 4682 3636153 - 3636132 - G 81 -3.6 -5.14477 | GACAGAGTTAAAAAA GCTCTCCG CAATCT CGAAGCGC GGGTAATCCGGCAAC CKO_03905 3637851 - 3636532 - | hypothetical protein TERM 4683 3637632 - 3637647 + g 76 -3.2 -5.0538 | overlap 3637607 CAGTCAGTGCGCCGA GGCTGT TGAT GTAGCC TTTTTTCGCGTCGCC CKO_03906 3639469 - 3637868 - | malate synthase TERM 4684 3638768 - 3638788 + g 76 -11.9 -3.05384 | opp_overlap 3638767 3638766 3638768 CGGCAGATTAAAACG GTCTTCGGC ATA GCTGAAGAC TTCGCTCCACCAGGC TERM 4685 3639677 - 3639692 + r 77 -10.4 -3.36991 | opp_overlap 3639677, overlap 3639675 TTCAGAAATAAAAAA GGCACC CGAA GGTGCC TGTTTCAACATGCTG TERM 4686 3639692 - 3639677 - R 100 -10.4 -5.72622 | opp_overlap 3639677 3639675 TTCAGAAATAAAAAA GGCACC CGAA GGTGCC TGTTTCAACATGCTG CKO_03907 3640667 - 3639738 - | homoserine O-succinyltransferase TERM 4687 3640895 - 3640909 + G 71 -4.2 -4.61868 | CTGGTGTCGTTCTGT TGATGC TAC GCACCA TTTTCTGTCTGCATC CKO_03908 3640824 - 3641261 + | hypothetical protein CKO_03909 3641396 - 3641238 - | hypothetical protein TERM 4688 3641407 - 3641383 - G 100 -15.7 -3.30124 | CTGTAGGCCGGATAA GGCGCAGCCGA CAT CCGGCTGCACC CGGGCGCATGAACGC TERM 4689 3641421 - 3641454 + r 74 -8.1 -3.96298 | opp_overlap 3641428, overlap 3641426 3641428 CCCGGGCGCATGAAC GCAAAAAGGCCATCC CTCA GGATGGCCTCTTCAC TTTAATTAATGCCTG TERM 4690 3641426 - 3641449 + r 79 -11 -3.338 | opp_overlap 3641428, overlap 3641421 3641428 GCGCATGAACGCAAA AAGGCCATCC CTCA GGATGGCCTC TTCACTTTAATTAAT TERM 4691 3641428 - 3641447 + r 86 -13.6 -3.22878 | opp_overlap 3641428, overlap 3641426 3641421 GCATGAACGCAAAAA GGCCATCC CTCA GGATGGCC TCTTCACTTTAATTA TERM 4692 3641447 - 3641428 - R 100 -13.6 -4.7629 | opp_overlap 3641428 3641426 3641421 GCATGAACGCAAAAA GGCCATCC CTCA GGATGGCC TCTTCACTTTAATTA TERM 4693 3644192 - 3644204 + r 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4694 3644965 - 3644978 + r 75 -6.7 -4.45807 | overlap 3644969 ACTGAAGTCTCAATC GCAAG ACGC CTTGC TTCTTTCTTTTCATC TERM 4695 3646770 - 3646786 + r 78 -5.1 -5.02421 | overlap 3646771 CATAATACGCTTTCC CGCTTGA GAG TCAAGCA TTTATTTTTGCTTTT TERM 4696 3646982 - 3647019 + r 74 -8.5 -3.98826 | opp_overlap 3646986 3646992, overlap 3646992 TTTTTGCCTGGTTTT TAAACAAAAACGAGCCC GAAT GGGCCCGTTTTTTATTA TTTGTGACTTACTGC TERM 4697 3647015 - 3646986 - R 82 -11.5 -3.53012 | opp_overlap 3646982 3646992, overlap 3646992 TGCCTGGTTTTTAAA CAAAAACGAGCCC GAAT GGGCCCGTTTTTT ATTATTTGTGACTTA TERM 4698 3647009 - 3646992 - R 100 -10.5 -5.27335 | opp_overlap 3646982 3646992, overlap 3646986 GTTTTTAAACAAAAA CGAGCCC GAAT GGGCCCG TTTTTTATTATTTGT TERM 4699 3646992 - 3647009 + r 100 -8.3 -5.74288 | opp_overlap 3646992 3646986, overlap 3646982 GTTTTTAAACAAAAA CGAGCCC GAAT GGGCCCG TTTTTTATTATTTGT CKO_03914 3649613 - 3647028 - | protein disaggregation chaperone TERM 4700 3647910 - 3647927 + g 73 -5.5 -4.66833 | GCGGCTGTGTAATTC CTGCTCC ATAC GCAGCAG TTTTTCACGTTCGCC TERM 4701 3648797 - 3648777 - G 71 -7.5 -3.93583 | opp_overlap 3648766 3648777, overlap 3648769 TAATTCATCGATAAA CAGGATGAC GTT GCCTTCCTG TTTGGCGAGATCGTT CKO_03915 3650462 - 3649731 - | hypothetical protein CKO_03916 3651439 - 3650459 - | 23S rRNA pseudouridine synthase D TERM 4702 3651188 - 3651160 - G 74 -10.3 -3.50853 | overlap 3651184 GTTTGTTAATGACAA GGATATCGTCATC TTC GTAGACGATATCC AGCGGGATATCCTGC TERM 4703 3651471 - 3651481 + H 74 -8.2 -3.8766 | TAACGTTGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC CKO_03917 3651571 - 3652308 + | outer membrane protein assembly complex subunit YfiO TERM 4704 3652347 - 3652328 - f 100 -15 -4.28774 | opp_overlap 3652328 GTACTGAACGCAAAA CGGCAGCC CTAA GGCTGCCG TTTTTTTATCCATTT TERM 4705 3652328 - 3652347 + F 100 -15 -5.68039 | opp_overlap 3652328 GTACTGAACGCAAAA CGGCAGCC CTAA GGCTGCCG TTTTTTTATCCATTT CKO_03918 3652537 - 3652917 + | translation inhibitor protein RaiA TERM 4706 3652943 - 3652958 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGG TERM 4707 3653136 - 3653117 - g 100 -15 -4.03167 | opp_overlap 3653117 GAAGACGAACAATAA GGCCTCCC ACAC GGGAGGCC TTTTTTATTGATAAC TERM 4708 3653117 - 3653136 + G 100 -15 -5.5112 | opp_overlap 3653117 GAAGACGAACAATAA GGCCTCCC ACAC GGGAGGCC TTTTTTATTGATAAC CKO_03919 3653098 - 3654327 + | bifunctional chorismate mutase/prephenate dehydratase CKO_03920 3655550 - 3654429 - | bifunctional chorismate mutase/prephenate dehydrogenase CKO_03921 3656631 - 3655561 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 4709 3657133 - 3657108 - g 72 -11.9 -2.63596 | overlap 3657090 3657089 GTCCACGCCAGAGGA CTGGCCGGAAA AACA TTTCCCGCCAG TTGCGACACGGTTGA CKO_03922 3656847 - 3657221 + | hypothetical protein CKO_03923 3657352 - 3657897 + | hypothetical protein TERM 4710 3658201 - 3658180 - g 90 -8 -4.82901 | opp_overlap 3658180 GGTCCGCGATAAAAA CCAGAAGG TAATCG CCTCCTGG TACTATGACGCACAA CKO_03924 3657890 - 3659113 + | hypothetical protein CKO_03925 3659127 - 3659609 + | putative outer membrane lipoprotein TERM 4711 3659666 - 3659620 - T 85 -14.2 -3.07994 | CGTAATGTTAGTCAA CTGGCTGCGCAAGGGCGGCGCG AGA CGTGCTGAACCAGCGCAGCCAG TCGATAACGATAAAT CKO_03926 3660970 - 3659612 - | hypothetical protein TERM 4712 3659876 - 3659858 - G 71 -11 -2.88118 | overlap 3659857 3659860 GTAGCCGATAATAAT CATCAGGC AAA GCCCGATG CCGAAGGCGATCAGC TERM 4713 3660952 - 3660924 - G 89 -8.8 -4.61873 | gap 1 GTGTAGAAATGAAAA CGTCGCAGCAGGG TTAT CCATGCCGCG-CG CGGAGTGCAGGTTGT CKO_03927 3661110 - 3660979 - | hypothetical protein CKO_03928 3661387 - 3661034 - | hypothetical protein TERM 4714 3661526 - 3661547 + r 71 -7.1 -4.16284 | opp_overlap 3661526 ACGAAGATAAAAAAA GGGCCAGCC AACT GGCCAGCCC TTTCTTACAGGATGT TERM 4715 3661547 - 3661526 - R 100 -11.5 -5.82172 | opp_overlap 3661526 ACGAAGATAAAAAAA GGGCCAGCC AACT GGCCAGCCC TTTCTTACAGGATGT CKO_03929 3661925 - 3661578 - | 50S ribosomal protein L19 CKO_03930 3662701 - 3661967 - | tRNA (guanine-N(1)-)-methyltransferase CKO_03931 3663330 - 3662779 - | 16S rRNA-processing protein CKO_03932 3663594 - 3663346 - | 30S ribosomal protein S16 TERM 4716 3663651 - 3663618 - R 100 -15.3 -4.63218 | opp_overlap 3663618 3663620 CTTGTGTGAATAAAA CACCCAGGCCCCATC GAGG AACGGAGCCCGGGTG TCATATTAAAAGCCC CKO_03933 3665205 - 3663844 - | signal recognition particle protein CKO_03934 3665369 - 3666160 + | hypothetical protein TERM 4717 3666437 - 3666484 + G 71 -7.6 -4.00038 | gap 1 ACCATCGTCGGTATG CGTCTGTACGGCGATG-CGGGCG TGG CGATTGCCACCGGCGTACTGACG TTTGTCGTCCTCGTA CKO_03935 3666224 - 3667465 + | hypothetical protein CKO_03936 3668273 - 3667518 - | heat shock protein GrpE TERM 4718 3668077 - 3668089 + g 72 -2.6 -4.84673 | overlap 3668066 ATTTCTTCCGGGGCT TGCC CCTCA GGCG TTTTCTGTTCTTTAC TERM 4719 3668409 - 3668395 - g 80 -5.6 -4.92239 | TGAAAAATGTAAAAA CCGGCA CGC TGGCGG AAATTGGTCAACTGG CKO_03937 3668307 - 3669113 + | hypothetical protein TERM 4720 3670278 - 3670255 - g 80 -8.8 -4.15044 | CTGGCGGTGAACAAA CATCGCCAGC AGGC GCTGGAGACG GCAAAAGCGCTGCAT CKO_03938 3669199 - 3670860 + | recombination and repair protein CKO_03939 3671010 - 3671354 + | hypothetical protein TERM 4721 3671370 - 3671400 + T 100 -18.6 -3.61715 | opp_overlap 3671378, overlap 3671378 GATTGTTTTCTGGTG TTAAAAAAGGTGCC ATT GGCACCTTTTTTAA TTATTGACGAACCTG TERM 4722 3671392 - 3671378 - T 100 -11.4 -5.00616 | opp_overlap 3671370 3671378 TCTGGTGTTAAAAAA GGTGCC ATT GGCACC TTTTTTAATTATTGA TERM 4723 3671378 - 3671392 + T 100 -11.4 -5.37865 | opp_overlap 3671378, overlap 3671370 TCTGGTGTTAAAAAA GGTGCC ATT GGCACC TTTTTTAATTATTGA CKO_03940 3671758 - 3671468 - | hypothetical protein CKO_03941 3672224 - 3671748 - | hypothetical protein CKO_03942 3672355 - 3672837 + | hypothetical protein TERM 4724 3673082 - 3673067 - f 72 -3.2 -5.08011 | overlap 3673069 AAAAGCCGCAAAAAA TAGTCG CAAA CGACGA AAACTACGCTTTAGC TERM 4725 3673382 - 3673407 + F 100 -14.7 -5.15381 | opp_overlap 3673382 3673373 AATGAAGTCTACTAA GCCCGCACAGC ACAA GCTCTGCGGGC TTTTTTACGTCTATT TERM 4726 3673407 - 3673382 - f 90 -14.7 -3.19425 | opp_overlap 3673382, overlap 3673373 AATGAAGTCTACTAA GCCCGCACAGC ACAA GCTCTGCGGGC TTTTTTACGTCTATT CKO_03944 3673469 - 3674740 + | hypothetical protein CKO_03945 3676615 - 3674894 - | hypothetical protein TERM 4727 3675503 - 3675527 + g 72 -3.5 -4.70659 | TAAAAAGAGTTTAAC CAAAGCAAGCC AGA GGTTTTCATTG TTTTTAGGTATAGGA TERM 4728 3676251 - 3676267 + g 73 -5.1 -4.53774 | ACTTTATCATTTGCA GATAAGC CAT GCTTTTC TTTTAATTCATTTAT CKO_03946 3678784 - 3676649 - | hypothetical protein TERM 4729 3678352 - 3678336 - G 74 -6.6 -4.33165 | GCAAATTCAGTAAAA GAAGCA GATCT TGCTTC CACATTGTCATCTTC CKO_03947 3679055 - 3680008 + | hypothetical protein CKO_03948 3680067 - 3680210 + | hypothetical protein TERM 4730 3680255 - 3680224 - f 70 -8.9 -3.40878 | opp_overlap 3680227, overlap 3680227 AGCAGCTTAATAATA TAACCAGTGAG GAAATATTAA CTCACTGGTTA CTACAAAGGAAAGAA TERM 4731 3680458 - 3680473 + G 89 -3.3 -5.58179 | AATAAGCTTAAAAGT GCAAA TGATTT TTTGC TTTTTTCTTCTGCTG CKO_03949 3680272 - 3680655 + | hypothetical protein CKO_03951 3680857 - 3680645 - | hypothetical protein CKO_03950 3680733 - 3680882 + | hypothetical protein TERM 4732 3680968 - 3680924 - TR 88 -12.4 -3.56972 | gap 2, opp_overlap 3680924, overlap 3680920 ACCCCATTAAATTAA GCAAGAGCTAACTCAGAGATGC TCC GCTTCTCTAAGTT-GC-CTTGC TTTTTCTGCTCTTTG TERM 4733 3680924 - 3680968 + Tr 100 -10.2 -5.00846 | gap 2, opp_overlap 3680924 3680920 ACCCCATTAAATTAA GCAAGAGCTAACTCAGAGATGC TCC GCTTCTCTAAGTT-GC-CTTGC TTTTTCTGCTCTTTG CKO_03952 3681282 - 3681106 - | hypothetical protein CKO_03954 3681761 - 3681402 - | hypothetical protein CKO_03953 3681685 - 3681903 + | hypothetical protein TERM 4734 3681909 - 3681928 + FH 77 -3.4 -5.1675 | overlap 3681912 ATGGAACTAATTTTA CATGGGCC TTTT GGCCCTTA TTTTTTAATGAATAA TERM 4735 3681912 - 3681925 + FH 93 -9.5 -4.67552 | overlap 3681909 GAACTAATTTTACAT GGGCC TTTT GGCCC TTATTTTTTAATGAA CKO_03955 3682165 - 3682593 + | hypothetical protein CKO_03956 3682562 - 3683773 + | hypothetical protein CKO_03957 3684311 - 3684697 + | hypothetical protein CKO_03958 3684710 - 3684973 + | hypothetical protein TERM 4736 3685012 - 3684997 - T 100 -10.4 -4.74518 | opp_overlap 3684997 AATTATTAAAATAAA GCTCCC TTTC GGGAGC TTTTATAATCTAACA TERM 4737 3684997 - 3685012 + T 93 -10.4 -4.50976 | opp_overlap 3684997 AATTATTAAAATAAA GCTCCC TTTC GGGAGC TTTTATAATCTAACA CKO_03959 3685452 - 3685015 - | hypothetical protein CKO_03960 3685936 - 3685538 - | hypothetical protein CKO_03961 3687613 - 3685946 - | hypothetical protein TERM 4738 3686479 - 3686491 + g 84 -2.7 -5.36314 | GCAAGCTAACATAAT TATCG AGA TGATA TTTTTTACTCTTTTG CKO_03962 3688778 - 3687591 - | hypothetical protein TERM 4739 3688678 - 3688696 + g 70 -3.2 -4.75472 | opp_overlap 3688678 ATTACCCTAATATAA TGCTTTAT TGC ATAAAACA TTTTCTTAGTATAAC TERM 4740 3688854 - 3688884 + r 72 -4.8 -4.70613 | opp_overlap 3688855 3688858, overlap 3688855 3688860 ATTTACTTTGAAGTT ACAATCTTTGGTTT CAA AAACCGAATATTGA TTTTCTTGAAGTTTT CKO_03963 3689985 - 3688867 - | hypothetical protein TERM 4741 3689973 - 3689961 - G 83 -6.3 -4.87133 | opp_overlap 3689961 3689959 3689961 ATCTTTCAAATAAAA GCAAA GCA TTTGC TATTGCTTCCATTGT TERM 4742 3690291 - 3690260 - R 87 -10.4 -4.13014 | opp_overlap 3690258 3690255 3690261 3690267, overlap 3690261 CTTACAGGTCGAAAA TTTATAATATCCCT CTAG AGGGATATTATAAT CCTTTCTTTTCACTT TERM 4743 3690290 - 3690261 - R 85 -13.9 -3.07487 | opp_overlap 3690258 3690255 3690261 3690267, overlap 3690260 TTACAGGTCGAAAAT TTATAATATCCCT CTAG AGGGATATTATAA TCCTTTCTTTTCACT TERM 4744 3690261 - 3690290 + r 86 -13.9 -3.262 | opp_overlap 3690261 3690260, overlap 3690258 3690255 3690267 TTACAGGTCGAAAAT TTATAATATCCCT CTAG AGGGATATTATAA TCCTTTCTTTTCACT TERM 4745 3690396 - 3690362 - R 83 -6.6 -4.98531 | TTTGTAAATCAAAAA GTAAATAGCACTATCA TTT CAATAATGCAATTTAC AAAATAGTACTAAAT CKO_03964 3690736 - 3690422 - | hypothetical protein TERM 4746 3691032 - 3691020 - R 89 -9.1 -4.65263 | opp_overlap 3691023 3691025, overlap 3691023 ACTTGGGAAAAGAAA GGAGC GAA GCTCC TGAAACGGAGGTTCT TERM 4747 3691126 - 3691094 - R 82 -11.4 -3.48276 | opp_overlap 3691094 TGGTGCCGTACAGAA CAGGGGAACTTGAG AGTAG CTGAAATTCCCCTG TTTTATAGCAAGTGG TERM 4748 3691094 - 3691126 + r 86 -9.2 -4.37886 | opp_overlap 3691094 TGGTGCCGTACAGAA CAGGGGAACTTGAG AGTAG CTGAAATTCCCCTG TTTTATAGCAAGTGG TERM 4749 3691174 - 3691204 + r 78 -4.8 -4.98911 | opp_overlap 3691180, overlap 3691175 3691180 AGTAAAAATCGCAAA AAAAAAGCATCATT TAC GATGATGCTTTTGG TTTCTTTTTATAATA TERM 4750 3691180 - 3691198 + r 88 -8.2 -4.78512 | opp_overlap 3691180, overlap 3691175 3691174 AATCGCAAAAAAAAA GCATCATT TAC GATGATGC TTTTGGTTTCTTTTT TERM 4751 3691198 - 3691180 - R 100 -7.5 -6.10489 | opp_overlap 3691175 3691174 3691180 AATCGCAAAAAAAAA GCATCAT TTACG ATGATGC TTTTGGTTTCTTTTT CKO_03965 3692090 - 3691245 - | hypothetical protein TERM 4752 3691923 - 3691891 - G 79 -2.7 -5.26875 | TCTGGAATCAAAAAA GGGTTACCGGTGAAA ATC TTTGAGAAGTAACCC ATAAGAGTTCTGCTC TERM 4753 3692189 - 3692226 + rH 74 -5.5 -4.57063 | overlap 3692191 AAAGCAGATCCTGCT TACGCAGTTCAACTCCC AGTT GGTAGCTGAACTGAGGA TTTGTTATCTTTTGA TERM 4754 3692492 - 3692468 - RH 79 -2.8 -5.32599 | opp_overlap 3692470, overlap 3692470 3692472 GAGAAAAGACAAAAA TATACACGTG AAATG CACGTGCACT TTAAAAGAACCCCAG TERM 4755 3692490 - 3692470 - RH 76 -7.6 -4.25747 | opp_overlap 3692470, overlap 3692468 3692472 GAAAAGACAAAAATA TACACGTG AAATG CACGTGCA CTTTAAAAGAACCCC TERM 4756 3692494 - 3692531 + rH 95 -12.9 -3.92075 | opp_overlap 3692502, overlap 3692502 AATGCACGTGCACTT TAAAAGAACCCCAGATC TCAC GGTCTGGGGTTTTTCTA TTTGTAACTAAGGGT TERM 4757 3692523 - 3692502 - RH 87 -10.1 -4.19746 | opp_overlap 3692502 3692494 TGCACTTTAAAAGAA CCCCAGATC TCAC GGTCTGGGG TTTTTCTATTTGTAA TERM 4758 3692502 - 3692523 + rH 100 -12.3 -5.24799 | opp_overlap 3692502, overlap 3692494 TGCACTTTAAAAGAA CCCCAGATC TCAC GGTCTGGGG TTTTTCTATTTGTAA TERM 4759 3692630 - 3692611 - gR 70 -3 -4.8048 | gap 1, opp_overlap 3692593 3692611 TTTTTACAGTAAAAA TACTGT-AT ACA ATCACAGTA ATTTTCCGGGGGGCT CKO_03968 3693108 - 3692785 - | hypothetical protein CKO_03966 3692583 - 3692891 + | hypothetical protein CKO_03967 3692888 - 3693040 + | hypothetical protein TERM 4760 3693047 - 3693031 - Gf 72 -2.2 -4.91109 | GCTTGAGTACAAAAA CAGGCA GTAGG TTCCTG TACTGACCCGGCTTT TERM 4761 3693879 - 3693889 + G 74 -6.8 -4.29738 | overlap 3693872 TTTGCTGGCTGGTGC GCTG GCA CAGC TTTTCGTACATATGA CKO_03969 3693607 - 3694083 + | hypothetical protein TERM 4762 3694105 - 3694123 + F 91 -7.4 -5.22312 | opp_overlap 3694105 CTTAATGTGGTAAAA TGGCGC AAACACA GCGCCA TTTTTTAGTATCCAT TERM 4763 3694123 - 3694105 - f 73 -7.4 -4.11484 | opp_overlap 3694105 CTTAATGTGGTAAAA TGGCGC AAACACA GCGCCA TTTTTTAGTATCCAT CKO_03970 3694211 - 3694354 + | hypothetical protein TERM 4764 3694755 - 3694741 - g 70 -7 -4.13014 | opp_overlap 3694748 TGGATAGGGGCAAAA GGCTGG GCT CCCGCC ACTGGCGGCAATATG CKO_03971 3694681 - 3695295 + | hypothetical protein TERM 4765 3695311 - 3695341 + G 75 -6.1 -4.65078 | TTCGCGCGATTGTGA CGGATATTGAAGG CACCA CCAGCGATATCCG TTTTGTTCACAATGT CKO_03972 3695292 - 3695981 + | hypothetical protein CKO_03973 3695978 - 3696520 + | hypothetical protein TERM 4766 3696527 - 3696555 + T 78 -12.4 -2.64616 | gap 1, opp_overlap 3696524 CTGCTTTAACGATCT GGCCGGGCG-ACG CTAT CGTACGCCAGGCC TGCTCTGCATCAGGC CKO_03974 3697593 - 3696565 - | hypothetical protein TERM 4767 3698667 - 3698633 - g 75 -6.9 -4.42386 | opp_overlap 3698634, overlap 3698635 TGGCGACGGAGAAAA CTCGCGACGCGGCGC TACGC GCGCCGGGCTACGCG TCGGAATTTCTGAAA CKO_03975 3697681 - 3698898 + | methylthioribose kinase CKO_03976 3700194 - 3698989 - | hypothetical protein TERM 4768 3699477 - 3699428 - G 79 -13.5 -2.83894 | gap 1, opp_overlap 3699439 AGTACCACCAGCAGA TCGCGGTCCGGCAGCGGCAGCGCA GTG TGTG-TGCCGCCGCCAAACGGCGG GCTCCAGTTGCGATG CKO_03978 3700395 - 3700273 - | hypothetical protein CKO_03977 3700243 - 3700374 + | hypothetical protein TERM 4769 3700372 - 3700404 + gT 72 -5.6 -4.4846 | overlap 3700374 3700375 ACAGGGAGCGCATTG TAG-GCCCGGTAAGCG CAG CGCC-ACCGGGCATTA TTTATTCTTCGCTTC TERM 4770 3700374 - 3700401 + gT 77 -7.6 -4.33582 | gap 1, overlap 3700372 3700375 AGGGAGCGCATTGTA GGCCCGGTAAGCG CAG CGCC-ACCGGGCA TTATTTATTCTTCGC TERM 4771 3700375 - 3700400 + gT 77 -11.1 -3.19065 | gap 1, overlap 3700374 3700372 GGGAGCGCATTGTAG GCCCGGTAAGCG CAG CGCC-ACCGGGC ATTATTTATTCTTCG CKO_03979 3701460 - 3700402 - | hypothetical protein TERM 4772 3700940 - 3700928 - G 71 -10.5 -3.2963 | AGCATTTGCTGATAA GCCGC CTG GCGGC GCTCCATCGGCGGGA CKO_03980 3702476 - 3701481 - | hypothetical protein CKO_03981 3704002 - 3702473 - | hypothetical protein TERM 4773 3702803 - 3702781 - GR 75 -9.8 -3.53012 | overlap 3702793 GGTTGCCGCCGGAAA GCCGACGCAA CAC TTGCCCCGGC CCGCGAGCGCGCACG TERM 4774 3703025 - 3702996 - GR 73 -10.7 -3.05384 | gap 1, opp_overlap 3702993 3702996, overlap 3703000 CCGCGCGTCACCGAA TCAACCG-GGTCGC GCG GCGTCCACGGCTGA TGATTAAGTTCGCCG TERM 4775 3703037 - 3703053 + gr 100 -13.7 -4.07568 | opp_overlap 3703033, overlap 3703052 CTGATGATTAAGTTC GCCGCGT TCA ACGCGGC TTTTCGACGCGCCGA TERM 4776 3703513 - 3703529 + gr 70 -6.5 -4.07885 | overlap 3703514 3703516 GCGAGAGCGCGCGGG CCAGCAG GAT CTGCTGC TTTTCGGCGAGCGTG TERM 4777 3703514 - 3703528 + gr 70 -10 -3.04517 | overlap 3703513 3703516 CGAGAGCGCGCGGGC CAGCAG GAT CTGCTG CTTTTCGGCGAGCGT CKO_03982 3704105 - 3703902 - | hypothetical protein TERM 4778 3705432 - 3705418 - g 80 -9.2 -4.15044 | GCGCTGTGCAACAAA CCGCAG ATA CCGCGG CCCAGACAATGACGA TERM 4779 3705623 - 3705646 + G 72 -11.7 -2.78015 | gap 1, opp_overlap 3705609, overlap 3705622 3705629 AGCGGTCGAAGCGGC CCGCG-CCGG TGAAT CCGGGCGCGG ATTTGCGGTCGTTGC TERM 4780 3705744 - 3705734 - g 74 -3.2 -4.87665 | GCTTATCGAGAAAAA CGTC ACC AACG TCAATACGGGAGTGC CKO_03983 3704481 - 3706022 + | hypothetical protein TERM 4781 3706039 - 3706060 + T 71 -3.5 -4.84918 | opp_overlap 3706039, overlap 3706034 AGCGAAAAGCAAAAA GCCCTCAGC ATAC GCCAGGGGC TTTTCTATTTATCGC TERM 4782 3706060 - 3706039 - T 82 -5.7 -5.10154 | opp_overlap 3706039 3706034 AGCGAAAAGCAAAAA GCCCTCAGC ATAC GCCAGGGGC TTTTCTATTTATCGC CKO_03984 3706895 - 3706080 - | hypothetical protein CKO_03985 3707795 - 3706905 - | hypothetical protein TERM 4783 3707111 - 3707122 + g 71 -5.8 -4.31329 | CGCTGAGCACCGCAT CCAG AAAG CTGG TTTTACGGTTTTTCA CKO_03986 3709715 - 3707811 - | hypothetical protein TERM 4784 3709440 - 3709451 + g 74 -7.2 -4.11906 | GCCGAGTAGCACCAG CGCC GTCA GGCG TTCTTTATCCGTTAT CKO_03987 3710861 - 3709728 - | hypothetical protein CKO_03988 3711900 - 3710872 - | hypothetical protein TERM 4785 3711857 - 3711836 - G 74 -2.1 -5.01732 | overlap 3711824 3711837 AAGCGCTCGAAAAAA GCGATCGGA TCGA TACGTCCGC TACGTTTGGCAGGGG CKO_03989 3713459 - 3711912 - | hypothetical protein TERM 4786 3712536 - 3712526 - G 71 -4.6 -4.59773 | CGTCAGCGCCAAAAA GGCA GCG CGCC ACTTCAGTACGCCCG CKO_03990 3714443 - 3713514 - | hypothetical protein CKO_03991 3715469 - 3714483 - | hypothetical protein TERM 4787 3715051 - 3715075 + g 77 -8.5 -4.07568 | AATGATTCCGGCTTG CCGATGCGC CCGCTCT GCGCTTCGG TTTTAACGCGGCGGA CKO_03992 3715770 - 3715552 - | hypothetical protein CKO_03993 3717695 - 3715785 - | hypothetical protein TERM 4788 3716175 - 3716154 - G 70 -8.7 -3.66999 | overlap 3716171 ATTGATGCAGCCAAA CCCGCCGTT ATCA AACAGCAGG ATGGTGATTTTTATC CKO_03994 3719227 - 3717722 - | hypothetical protein TERM 4789 3717968 - 3717948 - G 76 -9 -4.03413 | gap 1, overlap 3717951 ACCTCTTCACAGAAA CGACGCGCG CAGC CGC-CGTCG CGGGTAAAGATCGCC TERM 4790 3718844 - 3718867 + g 71 -4.6 -4.61231 | gap 1, overlap 3718844 GCTGTCAACGCCGGT GCCG-ACATTC GCC GAATGTTCGCC TTTTTGCAGGTGTGG CKO_03995 3719345 - 3720274 + | hypothetical protein TERM 4791 3720362 - 3720345 - T 91 -11.3 -4.27316 | TGCGTTAATTCAAAA TGCCCCT TTAC AGGGGCA CAAACGCAATGCTTT TERM 4792 3720405 - 3720424 + T 76 -5 -4.81551 | overlap 3720406 TTACTCTTTATTTAT CTTTTCGC TGGC GCGAAAAC TTTTTCATGTAAATC CKO_03996 3721102 - 3720401 - | hypothetical protein TERM 4793 3720786 - 3720768 - G 75 -6.1 -4.57569 | TTACGCCGTGAAAAA GTATGTT CTTTT AACATAC TGGATGCCAGGTCAA CKO_03997 3722404 - 3721103 - | hypothetical protein TERM 4794 3721243 - 3721255 + g 70 -3.3 -4.72846 | GGAACCATATTTGAT CCCGT CTG ACGAG TTTTTCCGTATCTAA TERM 4795 3722319 - 3722329 + g 77 -4 -5.00884 | GTCGTCTCTGGATGC TCTT TAT AAGA TTTTTTAGCAGCCAT CKO_03998 3722678 - 3723034 + | hypothetical protein TERM 4796 3723077 - 3723050 - T 73 -11.4 -2.62184 | opp_overlap 3723057, overlap 3723057 TTTTGCCTGACATGA GAAAAAAGCCGC TAAT GCGGCTTTTTTT ATTCCAGCGAATCAC TERM 4797 3723057 - 3723070 + T 100 -9.5 -5.7946 | opp_overlap 3723057 3723050 TGACATGAGAAAAAA GCCGC TAAT GCGGC TTTTTTTATTCCAGC TERM 4798 3723070 - 3723057 - T 100 -9.5 -5.34555 | opp_overlap 3723057, overlap 3723050 TGACATGAGAAAAAA GCCGC TAAT GCGGC TTTTTTTATTCCAGC TERM 4799 3723206 - 3723148 - T 73 -9.5 -3.33744 | GCCGTCGTTAAAAAC CGTACCCGCACAC-GCAGACCGCCCAGCG TTT CACTGCGCGA-CAGCTGTGGATGGGTACG GTGCAGGCGGGCAAT CKO_03999 3724538 - 3723126 - | hypothetical protein TERM 4800 3723729 - 3723760 + g 76 -5 -4.68593 | gap 1, opp_overlap 3723749, overlap 3723728 ACTGGCTAACGCCAC CGCCGCCTGC-GTTT TCA ATACAGCCAGCGGCG TTTTTAACTGATGGG CKO_04000 3725199 - 3724525 - | hypothetical protein TERM 4801 3724691 - 3724706 + g 73 -10.4 -3.33492 | opp_overlap 3724684 TCAAACAGCTGCTGG CGCGAC ACCG GTCGCG TTCTGCGGTACATCA TERM 4802 3726152 - 3726138 - g 74 -7.8 -4.07885 | TACGTGGGGCCAAAA GTCAGC GAT GCCGAC TACCAGTGGTGGGTA TERM 4803 3726222 - 3726209 - g 87 -8.1 -4.63527 | opp_overlap 3726209 CGACGAGTTTAAAAA GCAGC GTGA GCTGC GCGGCCTGTTTGCAT CKO_04001 3725352 - 3726329 + | hypothetical protein CKO_04002 3726344 - 3726775 + | hypothetical protein TERM 4804 3727103 - 3727119 + G 79 -11.5 -3.70902 | opp_overlap 3727100 GATGGCGCAACAGGG GCGCGGC GGC GTCGCGC TTTCCATCTCGGCGG CKO_04003 3726786 - 3728300 + | hypothetical protein TERM 4805 3728333 - 3728305 - T 100 -17.5 -2.53015 | ATATCGGCTAACGGA TTGCCGGATGGTG TTG CGCCATCCGGCAA TCATCACTGTCGCGC CKO_04004 3729782 - 3728337 - | hypothetical protein CKO_04005 3730045 - 3729899 - | hypothetical protein CKO_04006 3730067 - 3731044 + | hypothetical protein TERM 4806 3731811 - 3731821 + G 87 -8.2 -4.59773 | ACCCCATTCCCGATC CGGC GAT GCCG TTTTTGGGCGTCCAC CKO_04007 3731072 - 3732340 + | hypothetical protein TERM 4807 3732869 - 3732921 + G 86 -10.7 -4.09685 | gap 3, opp_overlap 3732862 3732863 3732904, overlap 3732863 CCCGCAAAGCCGGCC CGGCG-CTGGC-GGCCGGTTGTACGA TGGT TC-TGAAACCCGCCAGCCAGACGCCG TTTTCCGCCCTGGCG TERM 4808 3733405 - 3733369 - g 72 -3.6 -4.7497 | gap 1, overlap 3733381 CTGATTGACGAAAAA GCG-GTAGCCAAAGTGC AGGA GCACATCGCCGACGCGC TGGAGAAAGGCGCAA CKO_04008 3732364 - 3733812 + | succinate-semialdehyde dehydrogenase I TERM 4809 3734085 - 3734052 - g 72 -3.7 -4.78752 | opp_overlap 3734079, overlap 3734041 AGCACAACTGAAAAA GCTGTCGCATACCTG TTTT CAGGTACTCGCCTAC GAGCCGTATCTGGAG TERM 4810 3734212 - 3734198 - g 70 -7.1 -4.10855 | overlap 3734188 AAAACGCGGTGAAAA TCGCC CGTGC GGCGA CAAAGCGTAGCGGCG TERM 4811 3734438 - 3734474 + G 72 -2.2 -4.83615 | gap 1 CGCCGGAAGATATTG CCGCCATCATCATTGAA CCGG TACAGGGA-GAAGGCGG TTTTTATGCGGCCTC TERM 4812 3734482 - 3734495 + G 70 -5.2 -4.38154 | GAAGGCGGTTTTTAT GCGG CCTCGC CCGC TTTTATGCAGCGTCT TERM 4813 3734574 - 3734587 + G 70 -6.7 -4.11216 | opp_overlap 3734565 3734564 GCAAAGCGGCGCGGG GCGTA CCGG TACGC TTTTCGCGATGGAAC CKO_04009 3733837 - 3735120 + | 4-aminobutyrate aminotransferase TERM 4814 3735465 - 3735477 + G 74 -10.5 -3.53174 | opp_overlap 3735453, overlap 3735463 AATGGCCGTCGCCAC GCCGG ATA CCGGC TCTTTCTCAACCTAT CKO_04010 3735310 - 3736650 + | gamma-aminobutyrate transporter TERM 4815 3736924 - 3736947 + G 70 -6.8 -4.18018 | gap 1, overlap 3736926 ATCGTGTGGCGTCGA TGTCGGAGCAG GAA CTGCT-CGATA TTTTCGATGCCCGCG CKO_04011 3736707 - 3737399 + | DNA-binding transcriptional regulator CsiR CKO_04012 3737855 - 3737406 - | hypothetical protein TERM 4816 3737432 - 3737455 + g 74 -7.5 -4.1196 | gap 1, overlap 3737412 3737450 GGATACGTAAAACCT GCCCGGGATA TATTT TATCC-GGGC TTTTCAGCATCGGTT TERM 4817 3737605 - 3737647 + g 91 -3.5 -5.67283 | gap 2 GTTTTAACCTGATCT TCCACACTGCCGATCCCGGAA ATA TTCCCG-ATCG-CAATGAGGA TTTTTTCTTTCGCTT TERM 4818 3738166 - 3738194 + G 80 -8.7 -4.08064 | CCCGACGCGCAGCTG GCGCCGCTCTCCA CGC TTGAGCACGGCGC TTTTCCGGCGGCGTT CKO_04013 3738046 - 3738573 + | hypothetical protein TERM 4819 3738600 - 3738613 + T 70 -9.5 -3.04122 | opp_overlap 3738590 3738589, overlap 3738598 3738609 AGAATCGCCGCAGTC CCCGG CGGG CCGGG TGGTTTGTACTGACC TERM 4820 3738666 - 3738641 - T 73 -11.2 -2.62263 | ACCTGGTTGATATCA GCCGGATAAG CACCGT CTCATCCGGC AAAATACCGCGAAAT CKO_04014 3739082 - 3738681 - | DNA binding protein, nucleoid-associated CKO_04015 3739325 - 3739119 - | hypothetical protein CKO_04016 3739326 - 3739517 + | hypothetical protein CKO_04017 3739528 - 3740040 + | hypothetical protein TERM 4821 3740055 - 3740075 + T 100 -16.9 -3.50532 | overlap 3740051 3740047 AGACCCGCTTTCTTC GCGACTGGC AAG GCCAGTCGC TTCGTTAGTTTGAAT CKO_04018 3740436 - 3740080 - | hypothetical protein CKO_04019 3740587 - 3740925 + | hypothetical protein CKO_04020 3742311 - 3740959 - | hypothetical protein TERM 4822 3742257 - 3742273 + g 95 -8 -5.08824 | CCCCGGCCTTGAGTT CGCCAT GCTCA ATGGCG TTTTTTAACTGACGG TERM 4823 3742503 - 3742487 - g 77 -3.6 -5.0538 | overlap 3742498 GGCCAGGCCAAAAAA GCGTTG GAAAA CAGCGC GCTGGACACCACGCT TERM 4824 3742519 - 3742498 - g 70 -6.5 -4.10855 | opp_overlap 3742515, overlap 3742487 AAAAGCGTTGGAAAA CAGCGCGCT GGAC ACCACGCTG ATGGAACTGATTTAT CKO_04021 3742412 - 3742846 + | hypothetical protein TERM 4825 3742910 - 3742875 - f 82 -11.2 -3.53444 | gap 1, opp_overlap 3742867 3742894 GGATGGCGGCGTAAA CGCCTTATCCGGCCTAC ACC GTAGGCCCGATTAG-CG TAAGCGCCATCGGGC CKO_04022 3743094 - 3743354 + | glutaredoxin-like protein TERM 4826 3743519 - 3743542 + G 70 -3.1 -4.68593 | gap 1 GGCGGTACGGCAGGC GCGGTTCCAC GACAG GTG-ATCCGC TTTTTAAATGATGAA CKO_04023 3743351 - 3743761 + | ribonucleotide reductase stimulatory protein TERM 4827 3744340 - 3744357 + G 74 -4.7 -4.80882 | overlap 3744335 CTACAGCTTTCCAAG CGCGGCG GCGG CGTGGCG TTTTTGCTCTCGAAT TERM 4828 3744656 - 3744642 - g 74 -2.7 -4.86731 | opp_overlap 3744642 3744643, overlap 3744637 TCTGGCGAAAGAAAA CGCGC AGATG GCGCT GTTCTCGCCTTACGA TERM 4829 3745603 - 3745583 - g 76 -3.2 -5.04356 | gap 1, overlap 3745585 GCAAAGAAGGAAAAA CCGGGC-GC GTTT ACTACCCGG CCCCGTTTATGACCA CKO_04024 3743758 - 3745878 + | ribonucleotide-diphosphate reductase subunit alpha TERM 4830 3746295 - 3746272 - g 86 -9.6 -4.2828 | gap 1, opp_overlap 3746271 CTGGAGTGAGGAAAA TGCGCCGCTGC AAC GCAA-GGCGCA GATTATCCTGCAACA CKO_04025 3745889 - 3746848 + | ribonucleotide-diphosphate reductase subunit beta TERM 4831 3746962 - 3746990 + G 86 -10.4 -4.2231 | opp_overlap 3746962 ATATCTGCCACATTA TTCGCCTGAATT TCAGC AATTCAGGCGCA TTTTCGGTGGTCGTT CKO_04026 3746933 - 3747094 + | hypothetical protein TERM 4832 3747346 - 3747368 + G 72 -2.6 -4.93296 | opp_overlap 3747341 3747340 CGTTAAAGACGCCAG TCTGGCCATT GAA GAAGGCGAGA TTTTTGTCATCATGG CKO_04027 3747203 - 3748405 + | glycine betaine transporter ATP-binding subunit CKO_04028 3748398 - 3749462 + | glycine betaine transporter membrane protein TERM 4833 3750029 - 3750019 - g 74 -4.6 -4.79352 | TGATCGACAAGAAAA CCGC TGA GCAG TACAAGATCACTAAC TERM 4834 3750205 - 3750187 - g 76 -3.1 -5.03314 | gap 1 TCGATCTGGAAAAAA CCGTCGAC GTCA GCC-ACGG TAACTATGCCGCGAT CKO_04029 3749652 - 3750647 + | glycine betaine transporter periplasmic subunit TERM 4835 3750732 - 3750701 - f 71 -10.8 -2.59534 | gap 1, opp_overlap 3750711, overlap 3750694 3750700 AGTAACCACACCAAT GCCGGATGGTGGCGC GAT GCGCCTT-ATCCGGC CTATACGCCCTCCCC TERM 4836 3750711 - 3750723 + F 77 -10.5 -3.30771 | opp_overlap 3750701 3750700 CCAATGCCGGATGGT GGCGC GAT GCGCC TTATCCGGCCTATAC TERM 4837 3751924 - 3751940 + G 85 -11.5 -4.0371 | overlap 3751925 ATCGGCCTGGCAGCA TGCCGGC TGG GCCGGCG TTTGTCTGGCCGGTA TERM 4838 3751925 - 3751939 + G 81 -12.8 -3.01905 | overlap 3751924 TCGGCCTGGCAGCAT GCCGGC TGG GCCGGC GTTTGTCTGGCCGGT CKO_04030 3750839 - 3752023 + | hypothetical protein TERM 4839 3752756 - 3752740 - g 79 -7.9 -4.50159 | opp_overlap 3752740 TTCAACGCAAACAAA CGCTGTG CGT CACGGCG GCGTTAATCGGCGCG CKO_04031 3752148 - 3752885 + | hypothetical protein TERM 4840 3752995 - 3752964 - g 74 -10 -3.66178 | opp_overlap 3752971 3752973 TCTGCGAATGGGAAA CACCCGCCCCGCCA GGCG CGGCGCAACGGGCG TGTTGCTCGACACCA CKO_04032 3752875 - 3753210 + | hypothetical protein CKO_04033 3753301 - 3753831 + | transcriptional repressor MprA TERM 4841 3753909 - 3753874 - f 100 -11.2 -5.86976 | gap 1, opp_overlap 3753880, overlap 3753876 TTATAAAAGAAAAAA CTGACAGGCCAGCACGT CAT AC-TGCTGGCCTTTCTG ACAAAAACGTCGGCC TERM 4842 3753907 - 3753876 - f 80 -12.4 -3.03407 | gap 1, opp_overlap 3753880, overlap 3753874 ATAAAAGAAAAAACT GACAGGCCAGCACGT CAT AC-TGCTGGCCTTTC TGACAAAAACGTCGG TERM 4843 3753880 - 3753903 + F 95 -11.8 -3.85698 | gap 1, opp_overlap 3753876 3753874 AAGAAAAAACTGACA GGCCAGCACGT CAT AC-TGCTGGCC TTTCTGACAAAAACG TERM 4844 3753933 - 3753917 - f 73 -4.3 -4.82901 | overlap 3753918 3753919 CCTTTCTGACAAAAA CGTCGGC CCA GCCGATA TGAAAAATAAGATCG TERM 4845 3754297 - 3754276 - g 75 -6.5 -4.4874 | gap 1, overlap 3754278 TCGAAAAAGCGAAAA CG-GCGCTGG CCT CCAGCGTTCG CCAGACGCACCAGTT CKO_04034 3753933 - 3755132 + | hypothetical protein TERM 4846 3755744 - 3755711 - g 71 -9.5 -3.56092 | gap 1, opp_overlap 3755732 3755733 3755736 TGATGACGCTGCAAA CCCTGCGCGGTCGCGA GAC CCGC-ACCGAGCAGCG ACGTATCGACGCTAT CKO_04035 3755149 - 3756687 + | hypothetical protein TERM 4847 3756715 - 3756695 - T 100 -14.1 -5.5112 | opp_overlap 3756695 CGCATTAATAAAAAA GCCAGTTCA TGA TGAACTGGC TTTTTTTTTGCCGGA TERM 4848 3756695 - 3756715 + T 100 -14.1 -6.06723 | opp_overlap 3756695 CGCATTAATAAAAAA GCCAGTTCA TGA TGAACTGGC TTTTTTTTTGCCGGA CKO_04036 3757327 - 3756812 - | S-ribosylhomocysteinase TERM 4849 3757446 - 3757463 + r 100 -11.3 -5.58522 | CAGAGATGAAATTTT GGCCACT CACG AGTGGCC TTTTTCTTTTCTGTC CKO_04038 3759033 - 3757477 - | glutamate--cysteine ligase CKO_04039 3759535 - 3759107 - | hypothetical protein TERM 4850 3759199 - 3759188 - G 100 -3.6 -5.97575 | AAGGCATAAAAAAAA GAGC ACTG GCCC CCACGAGATGCGCAT TERM 4851 3759295 - 3759307 + g 74 -4.8 -4.72272 | CACCGTAGCGCTTAA GCCA GCCAG TGGC TTTTTCCTGCCAGCG CKO_04040 3760098 - 3759532 - | fructose-1-phosphatase TERM 4852 3759623 - 3759609 - G 75 -11.4 -3.36515 | overlap 3759607 3759612 CCGCATCCTCAAACA CGACGC ATT GCGTCG GCACAACGCCCATAC TERM 4853 3760277 - 3760292 + r 70 -9 -3.42996 | overlap 3760265 CCTCGCCCTACGGGC CGTTGC TGAA GCAACG TTATCCTCCCTGGTG TERM 4854 3760547 - 3760562 + r 70 -9 -3.42996 | overlap 3760535 CCTCGCCCTACGGGC CGTTGC TGAA GCAACG TTATCCTCCCTGGTG TERM 4855 3760618 - 3760608 - R 71 -6.8 -4.03811 | opp_overlap 3760608, overlap 3760605 CAGACCATGAAACAA CAGC GTA GCTG TTATACCGGGGAAGA TERM 4856 3760817 - 3760832 + r 70 -9 -3.42996 | CCTCTCCCTACGGGC CGTTGC TGAA GCAACG TTATCCTCCCTGGTG TERM 4857 3760888 - 3760878 - R 71 -6.8 -4.03811 | opp_overlap 3760878, overlap 3760875 CAGACCATGAAACAA CAGC GTA GCTG TTATATCGGGGAAGA CKO_04047 3761747 - 3761562 - | carbon storage regulator TERM 4858 3761943 - 3761966 + r 85 -13.8 -3.0701 | opp_overlap 3761943, overlap 3761930 3761925 TAACGTTGATGCAAA CGCCGCAGAC CGGG GCCTGCGGCG TTAGATAACGCTTAT TERM 4859 3761966 - 3761943 - R 100 -16 -3.65827 | opp_overlap 3761943 3761930 3761925 TAACGTTGATGCAAA CGCCGCAGAC CGGG GCCTGCGGCG TTAGATAACGCTTAT CKO_04048 3764614 - 3761987 - | alanyl-tRNA synthetase TERM 4860 3763015 - 3763036 + g 70 -3 -4.71061 | TCGAAAGCGTACCGA TATGTCCA ATCGCC TGGCCATA TTTTTGCGTATCGCT CKO_04049 3765126 - 3764746 - | hypothetical protein TERM 4861 3764915 - 3764949 + g 77 -4.3 -4.87291 | overlap 3764916 TCAATCTCGCATTCA CGCATTGCGCG CTCAATCGCCTCA CGCGCAATGCC TTTTTGATTCAGCTC TERM 4862 3765297 - 3765277 - R 100 -10.4 -4.88295 | AAAGAAATGCAAAAA GGGCCGCA AGATA TGCAGCCC TTCAAAGTATAAGCC TERM 4863 3765342 - 3765310 - R 86 -12 -3.60151 | gap 1 CCCTTCAAAGTATAA GCCCGATAA-GGCGC CAGA GCGCCGCCACCGGGC AATGCAACGATTAGA CKO_04050 3766417 - 3765353 - | recombinase A TERM 4864 3766375 - 3766390 + g 71 -4.6 -4.54608 | TTTCGATCTGGCCCA GCGCTG CCGC CAACGC TTTCTGTTTGTTTTC CKO_04051 3767014 - 3766514 - | competence damage-inducible protein A TERM 4865 3767130 - 3767111 - R 100 -13.6 -5.24531 | AGGCTTCAGAAAAAA GCCGATGC GAAG GCATCGGC CGATCGTACGGTTAT CKO_04052 3768035 - 3767142 - | hypothetical protein TERM 4866 3767238 - 3767279 + g 77 -8.6 -4.07568 | gap 1, opp_overlap 3767240 CAAGGCTTCAGGATA CAGCTCGCC-GCCCGGCTG CGCGC CCGTCGCGCTGGCGATCTG TTTTACCAGACGCGG TERM 4867 3768076 - 3768043 - R 100 -11 -5.14563 | gap 1, overlap 3768044 CCTTGCATTAAAAAA GCGCGC-GCAGACTG TCAGC CAGCCTGCTGCGCGT GCCGAATAAAATGGA TERM 4868 3768075 - 3768044 - R 100 -14.5 -3.68256 | gap 1, overlap 3768043 CTTGCATTAAAAAAG CGCGC-GCAGACTG TCAGC CAGCCTGCTGCGCG TGCCGAATAAAATGG CKO_04053 3768895 - 3768035 - | hypothetical protein TERM 4869 3768803 - 3768791 - G 81 -6.9 -4.77036 | overlap 3768793 3768794 TCGCAGCAGTAAAAA GACGC CAA GCGCC GTCGTGCTGACCGAA CKO_04054 3769545 - 3768892 - | hypothetical protein TERM 4870 3769682 - 3769668 - R 78 -5.8 -4.81212 | CGCACCACAATAAAA TGTTAT AAC ATAACA ATAATAAAATACGAT CKO_04055 3770951 - 3769851 - | murein hydrolase B CKO_04056 3771207 - 3771770 + | hypothetical protein TERM 4871 3772226 - 3772197 - g 85 -2.2 -5.52986 | gap 2 ACGCCAGCAAAAAAA TCACCGAACAGAGC GATG GC-CTGCT-GGCGA AAGTCGGTATGGGGA CKO_04057 3771767 - 3772738 + | hypothetical protein CKO_04058 3772750 - 3773112 + | glucitol/sorbitol-specific PTS system component IIA CKO_04059 3773131 - 3773910 + | sorbitol-6-phosphate dehydrogenase CKO_04060 3774012 - 3774371 + | DNA-binding transcriptional activator GutM TERM 4872 3774690 - 3774656 - g 73 -5.8 -4.4767 | gap 1, overlap 3774657 CTATCGATCACAAAA CGCTGATCAACACCC ATAAAA AGGCGTTGATC-GCA CAAGCGGCCGTCCAG TERM 4873 3775137 - 3775155 + G 70 -8.8 -3.72893 | opp_overlap 3775115 CAAACTGGTTACCGA CGCGGG TATCGAC CCCGCG TTTCGTCAGGCGCTG CKO_04061 3774445 - 3775218 + | DNA-bindng transcriptional repressor SrlR CKO_04062 3775211 - 3776176 + | D-arabinose 5-phosphate isomerase CKO_04063 3777693 - 3776173 - | anaerobic nitric oxide reductase transcription regulator TERM 4874 3777567 - 3777544 - G 70 -6.6 -4.1822 | CGCCAGCGGAATAAA CTGCCGCCCC TCAT AGCGCAGCAG CGCCGACGCATCGCA TERM 4875 3777768 - 3777781 + H 76 -2.5 -5.4148 | overlap 3777778 CTTTTTGACTACCAT TTTAT GAGT ATAAA TTTTTTAATTATTTA TERM 4876 3777979 - 3777965 - g 86 -7.8 -4.68724 | overlap 3777966 GGACCGAATATAAAA CGCTGC GCG GCAGCA GCTACAACAGCTATC CKO_04064 3777880 - 3779328 + | anaerobic nitric oxide reductase flavorubredoxin TERM 4877 3779499 - 3779522 + G 100 -18.2 -3.5394 | overlap 3779489 CAGCGCGCCGACGAC CTCACCCGCC AGTC GGCGGGTGAG TTTGCCGAACAGTTT CKO_04065 3779325 - 3780458 + | nitric oxide reductase CKO_04066 3780685 - 3780461 - | hypothetical protein TERM 4878 3780692 - 3780708 + r 100 -6.5 -6.60239 | CCCCGACACGTTTCG CCCCG CCAGTCC CGGGG TTTTTTTTTATTTTT CKO_04067 3783058 - 3780716 - | hypothetical protein TERM 4879 3781303 - 3781289 - G 91 -11.4 -4.258 | overlap 3781298 CCAGTCAGGAACAAA GCGCAG ACA CTGCGC CAGCAGGTTGCGCCA TERM 4880 3781671 - 3781650 - G 73 -8.7 -3.90291 | gap 1, opp_overlap 3781650 ATGTTCTGAATCAAA CGCAGC-GCG TCA CGCCACTGCG TTTGAATACCGTCAT TERM 4881 3783071 - 3783088 + r 78 -6.3 -4.58395 | gap 1, opp_overlap 3783071 3783069, overlap 3783060 CATCCGGCATGAATA CCGCCGTA TTT TACG-CGG TTTTTCAGGAATCAG CKO_04068 3783687 - 3783100 - | electron transport protein HydN TERM 4882 3783130 - 3783144 + g 78 -7 -4.58395 | opp_overlap 3783113, overlap 3783129 3783134 CGCGGAGGAGTCCAG CGCCGC ACG GCGACG TTTTTCCGCGCTCAG CKO_04069 3784822 - 3783800 - | hypothetical protein TERM 4883 3784621 - 3784638 + g 75 -6.3 -4.63218 | gap 1, overlap 3784621 3784622 3784624 GGGTGTTCGTCACCA C-CAGACC GAG GGTCTGCG TTTTCTTCGCCGCCA TERM 4884 3785631 - 3785605 - g 70 -2.9 -4.68655 | gap 1, opp_overlap 3785608, overlap 3785607 CAAGTTCAAAACAAA CATGTCGCTGGC GATT GCCATCG-CAGG CGTGCTGGTTCACCC CKO_04070 3785078 - 3786532 + | cellobiose/arbutin/salicin-specific PTS system components IIBC CKO_04071 3786549 - 3787979 + | cryptic 6-phospho-beta-glucosidase CKO_04072 3788484 - 3788062 - | hydrogenase 3 maturation protease CKO_04073 3788920 - 3788510 - | hypothetical protein TERM 4885 3788598 - 3788649 + g 81 -11.7 -3.59315 | overlap 3788596 AGCTTGCTCCACGCC TGCTGTTGCGGGTTTTGCG-CAGCG AGCG CGCTGTCG-AAAGCGCGCGCCAGCA TTTGCACATGGTTAA CKO_04074 3789684 - 3788917 - | hypothetical protein CKO_04075 3790226 - 3789684 - | formate hydrogenlyase complex iron-sulfur subunit CKO_04076 3791945 - 3790236 - | hypothetical protein CKO_04077 3792886 - 3791963 - | hypothetical protein CKO_04078 3794715 - 3792889 - | formate hydrogenlyase subunit 3 TERM 4886 3792946 - 3792972 + g 78 -13.6 -2.57132 | opp_overlap 3792939 3792960, overlap 3792945 CTCAATCAGCGCCAG GCGGCGGAACAG AAC CGGTGCCGCCGC ATTCTGCCAGCCCGG TERM 4887 3794066 - 3794022 - G 73 -10.6 -3.32698 | gap 2, overlap 3794020 3794023 CCACGGTAGAGAACA GGGCCGCCGCCGGCGCGCTGGC GTT GGCAT-GCGCCTGCGGC-ACCC AACCGTGCAGCGGGA TERM 4888 3794308 - 3794290 - G 70 -6.6 -4.183 | opp_overlap 3794290 GCAACCGGTAAGAAA CACCGCGC ACA GCGCCATG ATTTCCGCCATCACC CKO_04080 3795224 - 3794712 - | hypothetical protein TERM 4889 3794949 - 3794978 + gH 76 -9.2 -3.68619 | gap 1, overlap 3794949 3794960 CAGCAGCGTGCTGAC G-CGTGCCGGCGC GGGAG GCGCCGGCGGGGC TTTCGGTGAATTGGC CKO_04079 3795224 - 3795508 + | hypothetical protein CKO_04081 3795931 - 3795470 - | formate hydrogenlyase regulatory protein HycA CKO_04082 3796123 - 3796512 + | hydrogenase nickel incorporation protein CKO_04083 3796616 - 3797488 + | hydrogenase nickel incorporation protein HypB CKO_04084 3797479 - 3797751 + | hydrogenase isoenzymes formation protein CKO_04085 3797751 - 3798872 + | hypothetical protein CKO_04086 3798869 - 3799879 + | hypothetical protein TERM 4890 3799879 - 3799892 + F 70 -9.5 -2.96274 | overlap 3799875 GCCGCGTATATGCTA GCGCC TGAT GGCGC TGTGCTTATCAGGCC TERM 4891 3800149 - 3800165 + F 100 -13.7 -4.36914 | overlap 3800158 3800160 TTATTTACCGTTTTC GCACCGC ATC GCGGTGC TTTTCTGGAAAAGCA CKO_04087 3800198 - 3802261 + | hypothetical protein CKO_04088 3802306 - 3802734 + | hypothetical protein CKO_04089 3803179 - 3802811 - | hypothetical protein TERM 4892 3802972 - 3802993 + g 70 -3 -4.72272 | gap 2, opp_overlap 3802965, overlap 3802967 GCTGATAACAGTGTA CCGGACACTG CTTA CAG-G-CCGG TTTTTCCTCGCCAAA CKO_04090 3803328 - 3804260 + | hypothetical protein CKO_04091 3804257 - 3805078 + | hypothetical protein CKO_04094 3805984 - 3805859 - | hypothetical protein CKO_04092 3805075 - 3805935 + | hypothetical protein TERM 4893 3805944 - 3805958 + Gg 81 -8.6 -4.28487 | CGCTTAACCGCCTTA CTGGAA CCC TTCCAG TTTGATTTTATGATC CKO_04093 3805926 - 3806774 + | hypothetical protein TERM 4894 3809179 - 3809193 + G 76 -10 -3.86015 | GACGCGCTGGAGCAC GGCGAT ACC ATCGCC TTTATGCACAGCGTG TERM 4895 3809307 - 3809284 - g 70 -9.4 -3.76781 | overlap 3809299 AAAGAGGTGATCAAA CGCGCGCGGC AAAA GCTGCGCGAG CTGGAAAGCCTCTCG CKO_04095 3806923 - 3809484 + | DNA mismatch repair protein TERM 4896 3809520 - 3809493 - T 73 -7.6 -4.13654 | gap 1, overlap 3809489 3809494 GGTGTAAATCAGAAA CGCCCGGT-GGCG CTA CGCTTACCGGGCC TACAAGAAGCATCGC TERM 4897 3809519 - 3809494 - T 75 -11.1 -3.0771 | gap 1, overlap 3809489 3809493 GTGTAAATCAGAAAC GCCCGGT-GGCG CTA CGCTTACCGGGC CTACAAGAAGCATCG TERM 4898 3809545 - 3809573 + T 100 -7.5 -5.45652 | gap 2, opp_overlap 3809554 CATCGCAATCCGTAG GCCGGATAAGGCG CCAGC CGCC--ATCCGGC TTTTTTATTAACGCT CKO_04096 3809817 - 3809581 - | hypothetical protein CKO_04097 3811255 - 3809828 - | hypothetical protein CKO_04098 3811848 - 3811255 - | hypothetical protein CKO_04099 3811983 - 3812420 + | hypothetical protein CKO_04100 3812523 - 3812389 - | hypothetical protein TERM 4899 3812470 - 3812440 - G 71 -7.5 -3.99678 | opp_overlap 3812435 3812466, overlap 3812426 3812435 3812441 3812460 AGCCCGATAAGCAAA GCGCCATCGGGCA ATAAG TACCAGATGGCGG CTACGCCTTATCTGG TERM 4900 3812469 - 3812441 - G 71 -11 -2.99325 | opp_overlap 3812435 3812466, overlap 3812426 3812440 3812435 3812460 GCCCGATAAGCAAAG CGCCATCGGGCA ATAAG TACCAGATGGCG GCTACGCCTTATCTG TERM 4901 3812512 - 3812531 + g 100 -13.6 -5.41143 | opp_overlap 3812512 ACGGCCAAAGAAAAA GGCCAGTC TCAC GACTGGCC TTTTTTTGACGAATA TERM 4902 3812531 - 3812512 - G 100 -13.6 -5.27938 | opp_overlap 3812512 ACGGCCAAAGAAAAA GGCCAGTC TCAC GACTGGCC TTTTTTTGACGAATA CKO_04101 3813544 - 3812552 - | RNA polymerase sigma factor RpoS CKO_04102 3814560 - 3813607 - | lipoprotein NlpD TERM 4903 3813692 - 3813710 + g 82 -5.2 -5.00884 | overlap 3813693 3813694 GTAGAACTGGTTCCG GTGCTACC CAT GGTAGCGA TTTTTTGCCCCGCCT TERM 4904 3814071 - 3814085 + g 73 -5 -4.6635 | CGGTCCCAGCAGGCT TGTTGT TCG GCAACA TTTTATTAGCACTTT TERM 4905 3814355 - 3814365 + g 74 -2.4 -5.04385 | opp_overlap 3814351, overlap 3814362 CAGGCGATATAGAAA AGCG TGT CGCC TTTTTTAACGGTGTA CKO_04103 3814562 - 3814843 + | hypothetical protein CKO_04104 3815499 - 3814873 - | protein-L-isoaspartate O-methyltransferase CKO_04105 3816254 - 3815493 - | stationary phase survival protein SurE TERM 4906 3816038 - 3815999 - G 85 -12.8 -3.60151 | overlap 3816002 TGCCTGAAACCACAA TATCCGGGCGCGGACGCA TCAG CGCGTTCACGCCCAGGTA GACGCAGTCGGTCGG TERM 4907 3816035 - 3816002 - G 81 -14.5 -2.62144 | overlap 3815999 CTGAAACCACAATAT CCGGGCGCGGACGCA TCAG CGCGTTCACGCCCAG GTAGACGCAGTCGGT CKO_04106 3817284 - 3816235 - | tRNA pseudouridine synthase D TERM 4908 3817132 - 3817118 - G 70 -5.6 -4.37886 | opp_overlap 3817118 GCATCGGCCACAAAA CGGGTG TTA CAACCG TTTTTCAGAATGCGA TERM 4909 3817118 - 3817132 + g 73 -5.6 -4.59773 | opp_overlap 3817118 GCATCGGCCACAAAA CGGGTG TTA CAACCG TTTTTCAGAATGCGA CKO_04107 3817760 - 3817281 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CKO_04108 3818595 - 3817900 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CKO_04109 3818925 - 3818614 - | cell division protein FtsB TERM 4910 3819030 - 3819004 - R 70 -10.2 -2.57881 | overlap 3819003 GAATGCCGCGACAAC GCGGGCAAATGT ACC ACATTTATCCGC CGATCCGCATATCTC CKO_04110 3819450 - 3819127 - | hypothetical protein CKO_04111 3820105 - 3819500 - | adenylylsulfate kinase CKO_04112 3821532 - 3820105 - | sulfate adenylyltransferase subunit 1 TERM 4911 3820429 - 3820444 + g 71 -4.6 -4.57073 | ATGGCGAATGGCATC GACGCG CGCA CGGGTC TTTTTACCGGCAATC CKO_04113 3822450 - 3821542 - | sulfate adenylyltransferase subunit 2 TERM 4912 3821717 - 3821727 + g 91 -6.8 -5.15634 | opp_overlap 3821717 CCGAGGGTACGGAAA CGCA CCA TGCG TTTTTTGATCACCTC TERM 4913 3821955 - 3821965 + g 71 -4.6 -4.62069 | overlap 3821952 AGTTGTGCCATAGCT CCGG GCG CTGG TTTTTCGGGTCCCAG TERM 4914 3822857 - 3822879 + G 80 -9.8 -3.96216 | opp_overlap 3822849 3822857, overlap 3822858 AGAATGACCGGAACA CCGGCGGAGA TGC TCTCTGCCGA TTATTTACGTCAGCA TERM 4915 3822858 - 3822878 + G 81 -13.3 -2.97408 | opp_overlap 3822849 3822857, overlap 3822857 GAATGACCGGAACAC CGGCGGAGA TGC TCTCTGCCG ATTATTTACGTCAGC CKO_04114 3822704 - 3823747 + | alkaline phosphatase isozyme conversion aminopeptidase TERM 4916 3823862 - 3823816 - Tf 87 -11.1 -3.86346 | gap 2, opp_overlap 3823808, overlap 3823817 GGATGGCGGCATAAA TGC-CTTATCCGGCCTA-CAGAC ACT GTCTGGTAGGCCTGATAAGCGTA GCGCCATCAGGCAAC TERM 4917 3823859 - 3823817 - Tf 84 -13.7 -2.91593 | opp_overlap 3823808, overlap 3823816 GATGGCGGCATAAAT GCCTTATCCGGCCTA-CAGAC ACT GTCTGGTAGGCCTGATAAG-C GTAGCGCCATCAGGC CKO_04116 3824669 - 3823935 - | phosphoadenosine phosphosulfate reductase TERM 4918 3824170 - 3824144 - Gf 73 -5.1 -4.63527 | gap 1, overlap 3824145 GCAGCACTTTAAAAA CGCC-GCGCTGA ATCG CCAGCACTGGCA GATGTGCCCGGCTCC TERM 4919 3824462 - 3824450 - Gf 70 -9.1 -3.4072 | TATCGGTCAGGATAA CCGGA ATA TCCGG GCGAACCTGGTTAAC TERM 4920 3824703 - 3824744 + Gr 100 -16.9 -3.86346 | gap 1, opp_overlap 3824741 CTTGCCTGATGGCGC TGCGCTTATCAGGCCTAC CGTCTAC GTAGGCCTGATAAG-GCA TTTATGCCGCCATCC CKO_04115 3824614 - 3824814 + | hypothetical protein CKO_04117 3826483 - 3824771 - | sulfite reductase subunit beta TERM 4921 3825011 - 3824985 - G 73 -10.8 -3.33671 | AGATGCAGGTTATAA CGGCCCGGCG CTTTCCC CACCAGGCCG ACTTCCGCCAGCATG CKO_04119 3828288 - 3826483 - | sulfite reductase subunit alpha TERM 4922 3826671 - 3826689 + gH 77 -7.4 -4.28188 | opp_overlap 3826660 TCCAGCGCCACAGCT CTGCGC CCTGTTC GCGCAG TTTGTCTTGTACGTA CKO_04118 3828287 - 3828412 + | hypothetical protein CKO_04120 3828596 - 3828958 + | hypothetical protein TERM 4923 3829617 - 3829605 - g 71 -4.8 -4.55295 | CGCTGGATAAACAAA CGCT TGAAG AGCG CTTCCGATTGTCCGG TERM 4924 3830226 - 3830247 + G 83 -9.5 -4.11216 | gap 1, overlap 3830193 3830228 ATCCTGTGCCGCCGC TG-CGCCAGA TCG TCTGGCGTCA TTTTCGCCGTCACGG TERM 4925 3830228 - 3830244 + G 76 -12.3 -3.09004 | overlap 3830193 3830226 CCTGTGCCGCCGCTG CGCCAGA TCG TCTGGCG TCATTTTCGCCGTCA CKO_04121 3829040 - 3830311 + | hypothetical protein TERM 4926 3830516 - 3830504 - g 79 -3.3 -5.14563 | TGTGTGATGAAAAAA CGCTG CAA CAGTG GCGCTACCCGGCATC CKO_04122 3830302 - 3830562 + | hypothetical protein CKO_04123 3830645 - 3831220 + | hypothetical protein CKO_04124 3831340 - 3831200 - | hypothetical protein TERM 4927 3831289 - 3831300 + g 73 -5.8 -4.4009 | opp_overlap 3831288 3831284, overlap 3831274 GCCTGATAAGCATAG TGCC ATCA GGCA TTTTGTAGCCTACAC TERM 4928 3831319 - 3831346 + g 71 -4.8 -4.56597 | gap 1, overlap 3831320 TGTAGCCTACACGTA GGCCTGATAAGCG TAG CGCC-ATCAGGCA TTTTTGCAGCGGACC CKO_04125 3832194 - 3831340 - | hypothetical protein TERM 4929 3831885 - 3831897 + g 80 -4.8 -5.00616 | TTGCCGTCAGCGCAT TCCC CCAAT GGGA TTTTTTCACCAGGCC CKO_04126 3832973 - 3832191 - | hypothetical protein CKO_04127 3834279 - 3832951 - | hypothetical protein TERM 4930 3833364 - 3833354 - G 75 -6.8 -4.4891 | GCGAGCAGCATAAAA CTGC CGA GCAG AAATTGGCGGTGCGC TERM 4931 3833382 - 3833368 - G 80 -10 -3.96327 | opp_overlap 3833377 ACTGCCGAGCAGAAA TTGGCG GTG CGCCAA CAGGTGTGTTAACAA TERM 4932 3834241 - 3834218 - G 71 -9.6 -3.55761 | gap 1 TAGCCATCGGTCAAA TGC-GCGCCGA ATG TCAGCGCAGCA ATGCGGCAATGAAAA TERM 4933 3834330 - 3834351 + r 80 -10.1 -3.92522 | TGTCCGGTAAAGTCG CGGCTTCCC GGTT GAGAAGCCG TTTATACGCTTCGCC TERM 4934 3834365 - 3834395 + r 95 -12.7 -4.24204 | overlap 3834366 CGTTTATACGCTTCG CCCTTTAAGCTGC CTGAT GCAGCTTAAAGGA TTTTGCGTATAACTC TERM 4935 3834366 - 3834394 + r 100 -16.2 -3.1404 | overlap 3834365 GTTTATACGCTTCGC CCTTTAAGCTGC CTGAT GCAGCTTAAAGG ATTTTGCGTATAACT CKO_04128 3835866 - 3834412 - | hypothetical protein TERM 4936 3835049 - 3835017 - GR 75 -3.6 -4.87665 | gap 2, overlap 3835018 3835020 3835021 3835027 CTTCAGCCATAAAAA TCAGCACACATTTGCC GTC GGCAAA-ATGCG-TGA AGTGCTGGGTTCCAT TERM 4937 3835267 - 3835291 + gr 70 -3.4 -4.72986 | gap 1 GATATGGCGGATATC CG-GCCCGGCC GCCC GGCGAGGCACG TTTTTGATGCGGGTA TERM 4938 3835763 - 3835774 + gr 81 -2.2 -5.33405 | GCATATTTGCGAAAA CGGT CAAT ACTG TTTTTCTTTAATACG CKO_04129 3835958 - 3835830 - | hypothetical protein CKO_04130 3836715 - 3835930 - | hypothetical protein TERM 4939 3836631 - 3836583 - GH 91 -7.5 -5.06816 | gap 1, overlap 3836585 3836586 AGCTGGGAATAAAAA GAT-TGGCTCCGGCTTTCGCCA GCGCCA TCGCGAAAGCCTGACCCAGACC ACTGTTCCCGCCCGT TERM 4940 3836628 - 3836585 - GH 77 -8.1 -4.16307 | overlap 3836583 3836586 CTGGGAATAAAAAGA TTGGCTCCGGCTTTCGCCA GCGCCA TCGCGAAAGCCTGACCCAG ACCACTGTTCCCGCC TERM 4941 3836627 - 3836586 - GH 78 -11.6 -3.09061 | overlap 3836585 3836583 TGGGAATAAAAAGAT TGGCTCCGGCTTTCGCCA GCGCCA TCGCGAAAGCCTGACCCA GACCACTGTTCCCGC TERM 4942 3836787 - 3836750 - H 100 -22.3 -6.38039 | opp_overlap 3836750 3836754 CAGGCAAAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 4943 3836750 - 3836787 + H 100 -20.1 -2.92712 | opp_overlap 3836750, overlap 3836754 CAGGCAAAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 4944 3836754 - 3836783 + H 100 -15.1 -4.13 | opp_overlap 3836750, overlap 3836750 CAAAAAAAAAAGAAA GGTAACTTCCCCC GCGA GAGGGAAGTTACC TTTCTCATTATCTCT TERM 4945 3836962 - 3837001 + H 100 -15.2 -5.97575 | opp_overlap 3836969 AATTACTAGAGACCT GAGAAAAGTAATCCTCCT GAAA AGGCGGCTTACTTTTCTC TTTTTTTTGTCCATT TERM 4946 3836994 - 3836969 - H 75 -6.1 -4.4195 | opp_overlap 3836962 AGAGACCTGAGAAAA GTAATCCTCCT GAAA AGGCGGCTTAC TTTTCTCTTTTTTTT CKO_04131 3837034 - 3838332 + | hypothetical protein TERM 4947 3838647 - 3838631 - g 71 -5.7 -4.30576 | opp_overlap 3838646 CGCGCATTATTAAAA GCCGACG GCA CGCCCGC AGCTCCGCTGATTAG CKO_04132 3838352 - 3839836 + | hypothetical protein TERM 4948 3839896 - 3839908 + T 70 -9.1 -3.30124 | overlap 3839878 3839879 AACGTGCCGGATGGC GACGC GTT GCGTC TTATCCGGCCTACAA CKO_04133 3840657 - 3839986 - | hypothetical protein TERM 4949 3840060 - 3840072 + g 80 -9.1 -4.09519 | opp_overlap 3840058 AGGTTTCAATGCACA GACGC GTC GCGTC TTCTTTCTGGCTGAT TERM 4950 3840601 - 3840588 - G 75 -3.7 -4.94992 | overlap 3840589 GTAAACGGATAAAAA TGGCG GGGA CGCCG GTAAAGTAACCCTCA TERM 4951 3840765 - 3840752 - R 100 -9.5 -5.626 | opp_overlap 3840752 CACGCCATAAAAAAA CCCGC CGGA GCGGG TTTTTTACGTTAAGA TERM 4952 3840752 - 3840765 + r 100 -9.5 -5.15969 | opp_overlap 3840752 CACGCCATAAAAAAA CCCGC CGGA GCGGG TTTTTTACGTTAAGA CKO_04134 3842092 - 3840794 - | phosphopyruvate hydratase TERM 4953 3842133 - 3842161 + r 76 -11.7 -2.75483 | opp_overlap 3842124 3842135 3842138, overlap 3842132 CTAAAACTCCAGACA AACAACGCGTACC TTT GGTACGCGTTGCC GTTCTAACTTTTTTT TERM 4954 3842159 - 3842135 - R 100 -18.7 -4.08164 | opp_overlap 3842133 3842132, overlap 3842124 3842138 AAAACTCCAGACAAA CAACGCGTACC TTT GGTACGCGTTG CCGTTCTAACTTTTT TERM 4955 3842156 - 3842138 - R 100 -14.6 -4.15029 | opp_overlap 3842133 3842132, overlap 3842135 3842124 ACTCCAGACAAACAA CGCGTACC TTT GGTACGCG TTGCCGTTCTAACTT CKO_04135 3843819 - 3842182 - | CTP synthetase TERM 4956 3844100 - 3844085 - R 73 -4 -4.81359 | gap 1, opp_overlap 3844085, overlap 3844087 3844088 AACGGAAAGAGAAAA TAGCCCC TTT GGGG-TA AATGTTTTTGACGTA CKO_04136 3844964 - 3844173 - | nucleoside triphosphate pyrophosphohydrolase CKO_04137 3847329 - 3845095 - | GDP/GTP pyrophosphokinase CKO_04138 3848679 - 3847381 - | 23S rRNA 5-methyluridine methyltransferase TERM 4957 3847772 - 3847749 - G 88 -13.8 -3.33261 | CTTCAACGCCCACAA CGCTGGCGGC GCGC GTCGCCAGCG GCAGAGTAAAATTCC TERM 4958 3848636 - 3848655 + g 83 -10 -4.09685 | overlap 3848637 GTAACGGTTATGATC TGACGCGT CGTC ACGCGTCG TTTTGCAGAGTAGAA TERM 4959 3848637 - 3848654 + g 72 -11.3 -3.05597 | overlap 3848636 TAACGGTTATGATCT GACGCGT CGTC ACGCGTC GTTTTGCAGAGTAGA TERM 4960 3849468 - 3849450 - g 73 -5.2 -4.61231 | GGATATGCTGAAAAA CGGCATCA ACT CGATGGCG ATGTCGCTTGCCGCT TERM 4961 3849943 - 3849924 - g 75 -3.6 -4.93696 | overlap 3849915 3849939 GCTAAACATCAAAAA TGACGT ACCGGATA ACGTCA TCGGCGACCCGCTGC TERM 4962 3850753 - 3850733 - g 72 -3.9 -4.81212 | overlap 3850734 CGGATGAGAATAAAA TCGCCATGA CGG TAATGGCGG TCGACGATAACCCGG CKO_04139 3848737 - 3851493 + | hybrid sensory histidine kinase BarA CKO_04140 3852769 - 3851627 - | hypothetical protein TERM 4963 3852005 - 3851993 - G 74 -7.7 -4.07568 | overlap 3852003 CTCCGCGCCGCAAAA CGCAT ATA ATGCG GCTCCCAGACCGCCC TERM 4964 3852123 - 3852133 + g 87 -8.2 -4.56597 | CGTTGAATCATCTCC GGCG TGG CGCC TTTTTGCGGACCAAA TERM 4965 3852434 - 3852444 + g 78 -6.8 -4.58395 | opp_overlap 3852422 TAACTCACCGGTTCC CCAC GAG GTGG TTTTTAGCGGATCGC TERM 4966 3852571 - 3852545 - G 79 -7.8 -4.45577 | overlap 3852546 AGAAAGCCCATAAAA TGCCCGCACGCT GTC ACCGAGCGGGCC CGTCACGTCAACATC TERM 4967 3852570 - 3852546 - G 74 -11.3 -3.26262 | overlap 3852545 GAAAGCCCATAAAAT GCCCGCACGCT GTC ACCGAGCGGGC CCGTCACGTCAACAT CKO_04141 3854194 - 3852851 - | hypothetical protein CKO_04142 3855551 - 3854211 - | hypothetical protein TERM 4968 3854865 - 3854879 + g 82 -5.6 -5.00616 | ATCAACCGTGATTCG CGCATC CGG GAAGCG TTTTTTCAGCGCGCG TERM 4969 3855401 - 3855417 + g 88 -13.7 -3.35679 | overlap 3855382 CGGGCGCTTCACCCA CGCCGGT GTT ACCGGCG TTATCGGTGAGGACG TERM 4970 3855489 - 3855512 + g 80 -10.4 -3.85092 | gap 1, opp_overlap 3855487 GTTGAGTAACATACT GTCATGTCCGG CCA CCGGA-ATGAC TTTCATATCGGTAAT CKO_04143 3856906 - 3855554 - | hypothetical protein TERM 4971 3856682 - 3856665 - G 70 -5.5 -4.48987 | overlap 3856650 CGTTTAGAACCAAAA CGGTCGA GCAG CCAACCG CCGGGGATTTGCCCG CKO_04144 3857346 - 3857077 - | hypothetical protein TERM 4972 3857283 - 3857244 - G 100 -12.5 -4.26903 | gap 2, opp_overlap 3857256 TTGACCCTATGAAAA TGCCTCTGAAAACCCTTTC GTAT GAAAGGGTTTT-AG-GGCA AATGCCTGATGGCGC TERM 4973 3857256 - 3857273 + g 83 -9.9 -4.08216 | opp_overlap 3857244 AAATGCCTCTGAAAA CCCTTTC GTAT GAAAGGG TTTTAGGGCAAATGC CKO_04145 3857811 - 3857362 - | flavodoxin CKO_04146 3858612 - 3857830 - | tRNA pseudouridine synthase C TERM 4974 3858399 - 3858385 - G 71 -10 -3.53811 | opp_overlap 3858396 CTGATGCTGCTCAAA CTGCTG CGC CAGCAG GCGCCCCGCTTCGCT CKO_04147 3858941 - 3858612 - | hypothetical protein TERM 4975 3859006 - 3859035 + r 79 -10.7 -3.51411 | opp_overlap 3859008, overlap 3859002 3859007 AGACGAAATAAAAAA AAGGGAGCACTGT AAAA ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 4976 3859007 - 3859034 + r 83 -14.2 -2.70525 | opp_overlap 3859008, overlap 3859006 3859002 GACGAAATAAAAAAA AGGGAGCACTGT AAAA ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 4977 3859033 - 3859008 - R 100 -17.7 -6.25578 | opp_overlap 3859007 3859006 3859002 ACGAAATAAAAAAAA GGGAGCACTGT AAAA ACAGTGCTCCC GGTTCGTTTCGCAGC CKO_04149 3860121 - 3859576 - | SecY interacting protein Syd TERM 4978 3860565 - 3860540 - g 77 -8.2 -4.10657 | CCAGACGCTGGAAAA CGACCTGCGC GCCTGT GCGCAAGGCG AAGTCAGCGTCGCGC TERM 4979 3860883 - 3860895 + G 73 -5.5 -4.58283 | GAGTTCCACGAGCAG TGCGT AGA GCGCA TTTTTAACGACCTTC CKO_04150 3860190 - 3861038 + | 7-cyano-7-deazaguanine reductase TERM 4980 3861892 - 3861873 - g 70 -2.8 -4.70659 | gap 1 CCGGATATCGAAAAA CGCCTCGAA GCC TTCGTG-CG TATCGCCCACGGCAT CKO_04151 3861183 - 3862517 + | hypothetical protein TERM 4981 3862575 - 3862600 + TF 95 -7.6 -5.30155 | gap 2, overlap 3862571 3862570 3862569 GTCCGCTTTCTCAGA CCGGGTCTGGTG TTTT CACC-G-CCCGG TTTTTTCATTGATAC TERM 4982 3863004 - 3862991 - Tf 72 -3.1 -5.07941 | opp_overlap 3862991 AAAATTATATAAAAA TCGTC ATTA AACGA ATTTCATTTTACGGT CKO_04153 3864299 - 3863031 - | hypothetical protein CKO_04152 3863082 - 3864371 + | hypothetical protein TERM 4983 3864380 - 3864399 + FH 81 -12.8 -3.1876 | CAGCTAAGTTTTGTA GCGCCGCT TTCG GGCGGCGC TTCCTCCCTGAGATT TERM 4984 3864539 - 3864504 - g 73 -9 -3.90112 | GTCGGGCCAATGAAA GCAGGCAAACAATTCA CGGA TGATCTGATTGCCCGC AATATCCTGACCGAT TERM 4985 3865209 - 3865189 - g 70 -5.3 -4.4767 | opp_overlap 3865195, overlap 3865192 TCAGCCAGGATAAAA CCACGACCG ACC CGATGGCGG TTGTCGACTGGATCA TERM 4986 3865676 - 3865638 - g 71 -9.6 -3.53091 | gap 2, overlap 3865639 ATTGCCTCCGTGAAA GC-GGT-CAACGCCGCGC GTATG GCGCTGCGTCGTACCAGC GAGCCGCGCGTGTGC CKO_04154 3864432 - 3865799 + | hypothetical protein TERM 4987 3865843 - 3865873 + GF 77 -11.1 -3.23274 | opp_overlap 3865835 3865836, overlap 3865826 3865825 3865838 CGGATAAGGCGCTCG CCGCCATCCGGCA TTTAT TGCCTGATGGCGC TTCGCTTATCAGGCC CKO_04155 3865783 - 3866070 + | hypothetical protein CKO_04156 3865970 - 3866725 + | exonuclease IX TERM 4988 3866705 - 3866728 + T 75 -11 -3.03124 | opp_overlap 3866702 3866707, overlap 3866707 GACGGGAACTTACAG CAGCTACGGC TGAC GCGGTAGCTG TGTTGCCGGGTGGCG CKO_04157 3867954 - 3866806 - | L-1,2-propanediol oxidoreductase TERM 4989 3867161 - 3867145 - G 73 -5.7 -4.38712 | CGGAGTGTTATAAAA CGCGCCC AGC GGATGCG CCATCCCGTGCACCA CKO_04159 3868627 - 3867980 - | L-fuculose phosphate aldolase TERM 4990 3868180 - 3868190 + gH 80 -6.8 -4.56597 | overlap 3868174 GATGCTGTAGCAGGG TCGC TTT GCGA TTTTTGAGCGCAACG CKO_04158 3868612 - 3868830 + | hypothetical protein TERM 4991 3868846 - 3868879 + FH 71 -6.9 -4.12188 | gap 1, opp_overlap 3868846 TATTATTTATCCAAA CGGGCATTT-TCATAA TAT TTGTAACAAATGCCCG TTTTCGCAGTAATAA TERM 4992 3869363 - 3869382 + G 81 -2.1 -5.28942 | TTAACTAATTTTCAG GCAGGTT TGATTC AGTCTGC TTTTTATTTCGGCTA CKO_04160 3869183 - 3870493 + | L-fucose transporter TERM 4993 3870546 - 3870535 - g 87 -2.2 -5.63103 | CTGTAATGAAAAAAA TCAG CTTA CCGA AAATTGGCATTCGCC TERM 4994 3870675 - 3870657 - g 70 -3 -4.68593 | opp_overlap 3870667, overlap 3870659 CTTATCACCGAAAAA CTCCGC CATGCCT GCGGCG CGCAGATTGAATGTG CKO_04161 3870525 - 3872300 + | L-fucose isomerase CKO_04164 3872412 - 3872305 - | hypothetical protein CKO_04162 3872300 - 3872407 + | hypothetical protein CKO_04163 3872404 - 3873822 + | L-fuculokinase CKO_04167 3874317 - 3874153 - | hypothetical protein CKO_04168 3874352 - 3874188 - | hypothetical protein CKO_04165 3873824 - 3874246 + | hypothetical protein TERM 4995 3874242 - 3874232 - Gf 81 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CGCC GTAATCTCTTGCCGG TERM 4996 3874260 - 3874278 + gF 100 -16 -3.17212 | AATCTCTTGCCGGTG CGCCCGCA TGA TGCGGGCG TTCATCGAATGATGG TERM 4997 3874889 - 3874871 - gR 73 -9.6 -3.3062 | opp_overlap 3874870, overlap 3874864 3874884 3874888 CTCAAATACGATCAA CGCGGATT TCA AATCCACG CTGCTTAAGCGCGCA TERM 4998 3874976 - 3874992 + Gr 75 -9.5 -3.59979 | CATCGGGCATCTGGA TGATGTG ACG CACATCA TTTCCGATGAGCGCC CKO_04166 3874305 - 3875027 + | DNA-binding transcriptional activator FucR TERM 4999 3875075 - 3875056 - TR 83 -10 -4.18934 | TATCAGGCCAACAAA TACCCGGC GCAG GCCGGATA AGGCATTTACGCCGC CKO_04169 3876210 - 3875110 - | putative RNA 2'-O-ribose methyltransferase CKO_04170 3876598 - 3876203 - | hypothetical protein TERM 5000 3876313 - 3876302 - G 77 -7.2 -4.28111 | GACAGGAGTAACAAA CGCC CACA GGCG TAAATGAGACAGCGC TERM 5001 3876571 - 3876557 - G 77 -8.5 -4.21945 | overlap 3876551 AGCAACATAGATAAA GCCGC TTATC GCGGC AAAAATCAGCATAAA CKO_04171 3877534 - 3876617 - | DNA-binding transcriptional activator GcvA TERM 5002 3876657 - 3876691 + g 70 -9.4 -3.6543 | gap 1, overlap 3876655 TTTTCTTGTTCAGCG GCCG-CTTTGGTCAG AATCCA CTGACGAAAGGCGGC TATTTTACCCAGTTC TERM 5003 3877490 - 3877476 - G 79 -11.4 -3.6715 | CGAGTGAAGCTTAAA TGCCGC GCT GCGGCA TCAAAAACACGTAAT TERM 5004 3877775 - 3877791 + r 80 -6.5 -4.76892 | opp_overlap 3877775, overlap 3877776 CTGCGATTCAGACCA TGGTAGC GAA GCTACCC TTTTTCACTTCCTGT TERM 5005 3877776 - 3877790 + r 73 -10 -3.45051 | opp_overlap 3877775, overlap 3877775 TGCGATTCAGACCAT GGTAGC GAA GCTACC CTTTTTCACTTCCTG TERM 5006 3877841 - 3877859 + r 100 -11.7 -5.96219 | opp_overlap 3877837 3877841 ATAGTGATTAATGTA GCACCGC CAATT GCGGTGC TTTTTTTTGTCCATG TERM 5007 3877859 - 3877841 - R 76 -11.7 -2.57423 | opp_overlap 3877841, overlap 3877837 ATAGTGATTAATGTA GCACCGC CAATT GCGGTGC TTTTTTTTGTCCATG CKO_04173 3878177 - 3877884 - | hypothetical protein CKO_04174 3878310 - 3879515 + | cysteine sulfinate desulfinase CKO_04175 3879515 - 3879961 + | hypothetical protein TERM 5008 3879985 - 3879953 - T 81 -12.8 -3.14344 | gap 1, opp_overlap 3879963 GAGGCTGCCCAGCAA GCCGGATGACGACGC TGAT GCGTCTT-ATCCGGC CTACAACACCGCACG CKO_04176 3880845 - 3880039 - | hypothetical protein CKO_04177 3880984 - 3880829 - | hypothetical protein TERM 5009 3880899 - 3880937 + g 71 -10.4 -3.30124 | gap 2, opp_overlap 3880877, overlap 3880882 3880879 CCGGATACGTCGCTT GCG-A-CGCCATCCGGCA TGATT TGCCTGATGGCGCTACGC TTATCAGGCCTACGA CKO_04178 3882082 - 3880985 - | murein transglycosylase A TERM 5010 3882832 - 3882845 + r 83 -4.5 -5.42514 | opp_overlap 3882832 GCAACCAATATTAAA CACCT TAAC GGGTG TTTTTTCGTTTCTAC TERM 5011 3882889 - 3882876 - R 89 -5.9 -5.75342 | opp_overlap 3882869 3882876 GGTCCGTAAAAAAAA GCGCC TTTC AGCGC TTTTTTATTATCCCC TERM 5012 3882876 - 3882889 + r 86 -5.2 -5.55769 | opp_overlap 3882876, overlap 3882869 GGTCCGTAAAAAAAA GCGC CTTTCA GCGC TTTTTTATTATCCCC CKO_04182 3884231 - 3882897 - | hypothetical protein CKO_04183 3884474 - 3885715 + | N-acetylglutamate synthase TERM 5013 3885786 - 3885743 - T 72 -8.9 -3.60296 | gap 1, opp_overlap 3885734 GACGGCGACGCTAAA GCGTCTTATCGGGTCTACGG GGATG CTGTAGGCCAGATAAG-CGC AGGCGCCATCCGGCA TERM 5014 3885844 - 3885830 - T 82 -5.6 -5.14563 | overlap 3885831 CCCGTTATTAAAAAA CGCGGA CAG TCCGCT ACGTCGCTCCGTGCG TERM 5015 3885843 - 3885831 - T 76 -9.1 -3.68256 | overlap 3885830 CCGTTATTAAAAAAC GCGGA CAG TCCGC TACGTCGCTCCGTGC CKO_04184 3887635 - 3885809 - | exonuclease V subunit alpha TERM 5016 3885966 - 3885943 - G 72 -12.4 -2.69151 | overlap 3885940 3885958 CGGCGGTATACACCA GCTCGCGGGT CACA ACCGGCGAGC GCTGGCTGGGTAAAA TERM 5017 3886772 - 3886759 - G 72 -2.3 -4.83615 | overlap 3886760 3886762 GATCGCCGAGAAAAA TCACG CGTC CGTGC GGCGGCAGCGCCTCA TERM 5018 3886927 - 3886942 + g 100 -4 -5.88471 | gap 1, overlap 3886926 3886930 GGTGCAACGTACTGG CGTCATC CGG GATG-CG TTTTTTTTGCTCATC CKO_04185 3891177 - 3887632 - | exonuclease V subunit beta TERM 5019 3888733 - 3888721 - G 71 -10.5 -3.19463 | GCGACGACGCACCAA CGGCG CAA CGCCG AGGCTGCAATGCCAC TERM 5020 3891045 - 3891031 - G 85 -12.8 -3.53224 | CAGCCGTCGGGGAAA GGCGGC AGA GCCGCC CAATCCGAGCAGCAG TERM 5021 3891144 - 3891122 - G 79 -12.7 -2.90392 | GAGGCTTCAATCAGA CGCTCGCCC GTGAG GGGCAAGCG TAAAGGATCAAGGGA CKO_04186 3894058 - 3891170 - | hypothetical protein TERM 5022 3892567 - 3892582 + gr 78 -6.1 -4.72986 | opp_overlap 3892565 3892567, overlap 3892564 GCTCCGGTAATGACA GCGCA ATGCCC TGCGC TTTTTGCTGCCAGTC CKO_04187 3894161 - 3893952 - | hypothetical protein TERM 5023 3894100 - 3894120 + gr 88 -12.5 -3.61398 | TCCCGCTCAGGTGAA GCGCGAGCG CGA CGCTGGCGC TTATTGAGCAGGACA CKO_04188 3897608 - 3894240 - | exonuclease V subunit gamma TERM 5024 3896240 - 3896218 - G 71 -4.8 -4.60797 | overlap 3896220 3896237 TCTTCAGAGACAAAA CGGCTGTC CGGCAAC GACAGCAG GCTGATAAACGCCTG TERM 5025 3897321 - 3897339 + g 73 -6 -4.45544 | TTGCGGCAGCAGCGT CATCAGCT TCC AGCTCATG TTTTGCTTGCTGAAC CKO_04189 3897944 - 3897621 - | hypothetical protein CKO_04190 3898303 - 3897929 - | hypothetical protein CKO_04191 3898890 - 3898333 - | hypothetical protein TERM 5026 3898373 - 3898389 + g 70 -8.7 -3.72893 | opp_overlap 3898373 TATTGCGCCTCAACA GCGGTTT TAG AAGCCGC TTTACTGCGCCCCTG CKO_04193 3899357 - 3898887 - | hypothetical protein TERM 5027 3898961 - 3898971 + g 87 -8.2 -4.57073 | CCACCAGACGCCATT CGCC CGC GGCG TTTTTCAGGCGGATA TERM 5028 3899501 - 3899520 + r 74 -10.7 -3.29511 | opp_overlap 3899501 ACAGGATAAAAAAAA CCGACGC GCAAGG GCGTCGG TTATGACAGGATGAG TERM 5029 3899520 - 3899501 - R 100 -10.7 -6.00086 | opp_overlap 3899501 ACAGGATAAAAAAAA CCGACGC GCAAGG GCGTCGG TTATGACAGGATGAG CKO_04194 3900336 - 3899542 - | thymidylate synthase CKO_04195 3901218 - 3900343 - | prolipoprotein diacylglyceryl transferase CKO_04199 3903975 - 3901729 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain TERM 5030 3903785 - 3903795 + g 81 -2.4 -5.42259 | opp_overlap 3903785 GCGAGTGTGACAGTA CGGC CAC GCGG TTTTTTTAGCCCTCG CKO_04200 3904453 - 3903989 - | hypothetical protein TERM 5031 3904881 - 3904937 + H 76 -7.4 -4.2558 | opp_overlap 3904872 3904898, overlap 3904886 AAAGATCAACCACCG TCGCTTTTATCCACAGATTGTGCCAA TAAGT TAGGCACAATTTGTGTAAAAATTCGA TTTTCGTCGCACGTC TERM 5032 3904886 - 3904932 + H 70 -8.9 -3.39521 | opp_overlap 3904898, overlap 3904881 TCAACCACCGTCGCT TTTATCCACAGATTGTGCCAA TAAGT TAGGCACAATTTGTGTAAAAA TTCGATTTTCGTCGC CKO_04201 3904975 - 3905124 + | hypothetical protein TERM 5033 3905821 - 3905833 + G 75 -6.9 -4.52589 | overlap 3905797 AGAGACCATTCTGAC GCTGC CGC GCGGC TTTTATCTGAAAAAG CKO_04202 3905204 - 3905896 + | DNA mismatch repair protein TERM 5034 3905931 - 3905947 + TF 72 -3 -4.96028 | gap 1, overlap 3905921 CACCTGCCGCATTGC GCGCCTA TAAT TA-GCGC TTCTTTTTTTTGGCA CKO_04204 3906748 - 3905978 - | hypothetical protein CKO_04203 3905975 - 3906688 + | hypothetical protein CKO_04205 3906835 - 3907053 + | hypothetical protein TERM 5035 3907055 - 3907086 + F 80 -6.6 -4.81359 | overlap 3907057 TCATTGAACGCTAAT TGTTGAGGTCAGCA GCCC TGCTGGCCTTAGAA TTTTCTCTTTCCCTT TERM 5036 3907263 - 3907253 - g 71 -4.6 -4.63218 | GTTTGGTGAACAAAA CAGC GAA GCCG ACGCACATGCACAGC CKO_04206 3907233 - 3908213 + | putative aldo-keto reductase TERM 5037 3908298 - 3908335 + T 76 -11.9 -2.57931 | opp_overlap 3908292 3908296, overlap 3908299 GCCGGATAAGGCACC TGCGCCGCCATCCGGCG CTTC TGCCTGATGGCGCTGCG CTTATCAGGCCTACC TERM 5038 3908299 - 3908315 + T 77 -10.8 -3.37796 | opp_overlap 3908292 3908296, overlap 3908298 CCGGATAAGGCACCT GCGCCG CCATC CGGCGC TTCTGCCTGATGGCG CKO_04207 3909560 - 3908364 - | hypothetical protein TERM 5039 3908533 - 3908551 + g 78 -6.6 -4.63486 | TTCTGTACCGCAATC GCGTTGCC CGC GCCGACGC TTTTCTTGCCGCGCT TERM 5040 3908871 - 3908854 - G 70 -5.5 -4.49311 | gap 1, overlap 3908855 AGCACCAGCAGAAAA CGCA-GCG TGA CGCCCGCG CCCCAAAAAAGGCTG TERM 5041 3908899 - 3908882 - G 82 -5.5 -5.00616 | overlap 3908883 CCGCGCCCCAAAAAA GGCTGGT GCCA ACCAGCG AGAAACGCGTCTCCC CKO_04208 3911712 - 3909553 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 5042 3911811 - 3911828 + rH 81 -12.7 -3.14132 | opp_overlap 3911811 AAGGACGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 5043 3911828 - 3911811 - RH 100 -12.7 -5.89827 | opp_overlap 3911811 AAGGACGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACA TERM 5044 3912013 - 3912031 + rH 70 -8.8 -3.35176 | opp_overlap 3912013 TAAGCGCAAAAAAAA CCTGCACA TGA TGCGCAGG TTGGTGTAATTCTTG TERM 5045 3912031 - 3912013 - RH 100 -11 -5.81032 | opp_overlap 3912013 TAAGCGCAAAAAAAA CCTGCACA TGA TGCGCAGG TTGGTGTAATTCTTG CKO_04212 3912354 - 3912226 - | hypothetical protein CKO_04211 3912305 - 3913333 + | DNA-binding transcriptional regulator GalR TERM 5046 3914332 - 3914345 + G 74 -2.3 -5.09225 | overlap 3914333 TGCTGCGTGATTCAG TGACC ACCG GGCCA TTTTTTCAGTCGGAT CKO_04213 3913347 - 3914366 + | hypothetical protein CKO_04214 3915740 - 3914478 - | diaminopimelate decarboxylase CKO_04216 3915903 - 3915715 - | hypothetical protein TERM 5047 3916541 - 3916582 + Gr 79 -9.9 -3.71527 | opp_overlap 3916536 3916535, overlap 3916568 TCGTGGAAACCCACA GCGCGGCGTCGGTTTGCGC GATG GTGCGCGCGGGCGCCGGGC TTTCGGTGGTTAACC CKO_04215 3915865 - 3916800 + | DNA-binding transcriptional regulator LysR CKO_04217 3917479 - 3916787 - | putative racemase TERM 5048 3916869 - 3916841 - G 80 -10.2 -3.78775 | overlap 3916843 CGCCGCAGTATCAAA CACCGGCAGCGC GCTCT GCGCTTCCGGCA CCAGCAACCCAATCT TERM 5049 3916867 - 3916843 - G 85 -12.8 -3.48024 | overlap 3916841 CCGCAGTATCAAACA CCGGCAGCGC GCTCT GCGCTTCCGG CACCAGCAACCCAAT CKO_04218 3917622 - 3917948 + | hypothetical protein TERM 5050 3917957 - 3917980 + T 100 -16.8 -3.32844 | opp_overlap 3917953 CGCGTAAGCCATACG CATCCGGCCT GCAC AGGCCGGATG TTATCGCCTCACCGG TERM 5051 3917986 - 3918003 + T 71 -6.9 -4.09685 | overlap 3917982 AGGCCGGATGTTATC GCCTCAC CGGG GCGAGGC TTTTACGACATCAGA CKO_04219 3918781 - 3918020 - | 2-deoxy-D-gluconate 3-dehydrogenase CKO_04220 3919686 - 3918838 - | 5-keto-4-deoxyuronate isomerase TERM 5052 3919713 - 3919734 + G 73 -5.1 -4.61873 | gap 1, opp_overlap 3919713 CCGTGAATGTCAGAA CGGAA-GGCG AAA CACCGTTCCG TTTTACTTTATGCGG CKO_04221 3919700 - 3919894 + | hypothetical protein TERM 5053 3919981 - 3919960 - T 80 -7.3 -4.64861 | gap 1 GCTCCTGAAAAGAAA CGCCGGATTG CTG CAACCCG-CG GCGTCAGGGAGGGGA CKO_04222 3921246 - 3920068 - | acetyl-CoA acetyltransferase TERM 5054 3920430 - 3920417 - G 83 -9.5 -4.08767 | CCGACGCTGGCAAAA GCGCG AATA CGCGC CAGTATGGGTAAATC CKO_04223 3922232 - 3921354 - | hypothetical protein CKO_04224 3922315 - 3922791 + | hypothetical protein TERM 5055 3923147 - 3923132 - g 70 -6.8 -4.07568 | TCCTCTCTTCGAAAA CCTCCG CTGG CGAAGG GATCACCGGTGCGGT TERM 5056 3923204 - 3923220 + G 76 -5.1 -4.78107 | GCAGTCTCATCACCT CGCTATA CTT TATTGCG TTTTTCGTGGTGGTC TERM 5057 3924006 - 3924037 + G 91 -7.4 -5.02323 | gap 1, overlap 3924009 CGCCATTTCGATGAT TTAT-GCGATCAGCG GCC CGCTTATCGCCATGA TTTTGTTTATCATGC CKO_04225 3922933 - 3924162 + | hypothetical protein TERM 5058 3924210 - 3924171 - T 70 -10 -3.09492 | opp_overlap 3924176, overlap 3924176 TGGCTAATCTCAATA CAAAACGGCTCATCCACC TGAA GAGGGGCGAGCCGTTTTA CTCAGTCTTTAATCT TERM 5059 3924205 - 3924176 - T 82 -7.7 -4.6821 | opp_overlap 3924176, overlap 3924171 AATCTCAATACAAAA CGGCTCATCCACC TGAA GAGGGGCGAGCCG TTTTACTCAGTCTTT CKO_04226 3924685 - 3924224 - | hypothetical protein TERM 5060 3924308 - 3924296 - G 70 -3.3 -4.72272 | opp_overlap 3924296 3924299, overlap 3924297 3924299 GGGTTGTATCAAAAA CGAGA ACG TCGCG TCCTTTGATAAATAA CKO_04227 3925373 - 3924672 - | hypothetical protein TERM 5061 3925270 - 3925287 + g 70 -6.9 -4.07568 | opp_overlap 3925283, overlap 3925281 3925283 TTCTTCTCTCCCCAA CCCGCTG TAAT CAGCTGG TTTTGAGAAACCACC CKO_04228 3926177 - 3926764 + | hypothetical protein CKO_04229 3927069 - 3926797 - | hypothetical protein CKO_04230 3927097 - 3928056 + | nickel/cobalt efflux protein RcnA TERM 5062 3928081 - 3928105 + TF 71 -10.8 -2.58892 | gap 1, opp_overlap 3928081, overlap 3928077 GCCTTTTTCCACAAA CGTGCAGCGAC CCAA GT-GCTGCACG TCCGTTCATATCAAT TERM 5063 3928105 - 3928081 - Tf 84 -10.8 -3.85698 | gap 1, opp_overlap 3928081 3928077 GCCTTTTTCCACAAA CGTGCAGCGAC CCAA GT-GCTGCACG TCCGTTCATATCAAT CKO_04233 3928329 - 3928111 - | hypothetical protein CKO_04231 3928172 - 3928390 + | hypothetical protein CKO_04232 3928243 - 3928443 + | hypothetical protein CKO_04234 3928865 - 3928692 - | hypothetical protein CKO_04235 3929039 - 3929572 + | hypothetical protein TERM 5064 3929601 - 3929582 - f 70 -10.7 -2.57489 | opp_overlap 3929581 3929580 3929582 CAGTAATTTAACCCA GGCGGGA ATTTCG TCCCGCC CTCTTTCGACCAGGG TERM 5065 3929582 - 3929601 + F 71 -10.7 -2.60496 | opp_overlap 3929582, overlap 3929581 3929580 CAGTAATTTAACCCA GGCGGGA ATTTCG TCCCGCC CTCTTTCGACCAGGG CKO_04236 3929625 - 3930374 + | hypothetical protein TERM 5066 3931279 - 3931289 + G 95 -8.2 -4.89477 | opp_overlap 3931272, overlap 3931275 TACGAAACCACCGTC GCGC CCG GCGC TTTTGTTATTAACGA CKO_04237 3930355 - 3932922 + | hypothetical protein TERM 5067 3933404 - 3933386 - g 70 -3 -4.7629 | opp_overlap 3933386, overlap 3933388 TGACCAATCTAAAAA CCGGAGAA TAT TACTCCCG TTACTGGAAAGCGCG CKO_04238 3932926 - 3934263 + | hypothetical protein TERM 5068 3934978 - 3934966 - g 74 -6.9 -4.37211 | GAAACCGATAATAAA CAGCG GAG CGCCG GAAAATACCGTGGGC TERM 5069 3935007 - 3934984 - g 70 -6.6 -4.08767 | overlap 3934986 3935003 CGGAGCGCCGGAAAA TACCGTGGGC AGAA ACCCACGGCG ATGACCGGTAAAACG TERM 5070 3935005 - 3934986 - g 79 -11.4 -3.6422 | overlap 3934984 3935003 GAGCGCCGGAAAATA CCGTGGGC AGAA ACCCACGG CGATGACCGGTAAAA CKO_04239 3934325 - 3935011 + | hypothetical protein CKO_04241 3935300 - 3935025 - | hypothetical protein CKO_04242 3935539 - 3935309 - | hypothetical protein CKO_04240 3935187 - 3935459 + | hypothetical protein CKO_04243 3937235 - 3935661 - | hypothetical protein CKO_04244 3937464 - 3937607 + | hypothetical protein CKO_04245 3937758 - 3938426 + | hypothetical protein TERM 5071 3939147 - 3939137 - g 70 -6.8 -4.08216 | CCACGCTGCCGAAAA CGCA CAT TGCG GTGATGGGGATGGAG TERM 5072 3939760 - 3939743 - g 74 -7.7 -4.09739 | gap 1, opp_overlap 3939742 TTAATGGCGGTAAAA CGCCG-CT TAA AGTCGGCG CTATTGGTGACTGGA CKO_04246 3938437 - 3939864 + | hypothetical protein CKO_04247 3939857 - 3940552 + | hypothetical protein CKO_04249 3941152 - 3940802 - | hypothetical protein CKO_04250 3941749 - 3942294 + | isopentenyl-diphosphate delta-isomerase CKO_04251 3943911 - 3942394 - | lysyl-tRNA synthetase CKO_04252 3944802 - 3943921 - | hypothetical protein TERM 5073 3944682 - 3944692 + g 78 -6.8 -4.63932 | TACGACGGAATTCCA GCTG CGC CAGC TTTTCTTCCAGCGTA CKO_04253 3944803 - 3944958 + | hypothetical protein CKO_04254 3946839 - 3945106 - | ssDNA exonuclease RecJ TERM 5074 3946798 - 3946821 + g 70 -8.9 -3.73659 | gap 1, overlap 3946798 TGGCAGCTCAGCTGT CT-CGTCGGC CTCAC GCCGACGAAG TTGTATCTGTTGTTT CKO_04255 3947558 - 3946845 - | thiol:disulfide interchange protein DsbC TERM 5075 3946982 - 3946943 - G 75 -11.4 -3.40403 | gap 1, overlap 3946944 CGTTGCTCAGCACAA TCGCT-GGCGTGCCGCTCA CGC CGAACTGCACGCCCAGCGC ATAATGATTGGCGAT TERM 5076 3946981 - 3946944 - G 83 -14.9 -2.64099 | gap 1, overlap 3946943 GTTGCTCAGCACAAT CGCT-GGCGTGCCGCTCA CGC CGAACTGCACGCCCAGCG CATAATGATTGGCGA CKO_04256 3948478 - 3947582 - | site-specific tyrosine recombinase XerD TERM 5077 3947868 - 3947857 - G 72 -2.2 -4.86731 | GGCTGGGAAATAAAA CGTC AATC GACA CGCCGTTCAACAGCC TERM 5078 3948249 - 3948236 - G 80 -9.5 -3.93256 | CAGATGCTGAAAGAA GCGCC GCGT GGCGC TCAACAACCGTGCGG TERM 5079 3948978 - 3948993 + G 74 -3.2 -4.84359 | overlap 3948979 AGCCCGAAACCGGTC ATTGCC GATG GGCAAC TTTTTGTCGGCCTGG CKO_04257 3948582 - 3949106 + | flavodoxin FldB CKO_04258 3949518 - 3949204 - | hypothetical protein CKO_04259 3949810 - 3949592 - | hypothetical protein TERM 5080 3950686 - 3950671 - g 73 -10.4 -3.38812 | overlap 3950669 CGGCGCTGAACAACA GCCAGC AGTG GCTGGC GCTGGATATTGAAGC CKO_04260 3950163 - 3951095 + | putative global regulator CKO_04261 3951235 - 3951077 - | hypothetical protein TERM 5081 3951116 - 3951105 - G 77 -7.2 -4.22475 | overlap 3951102 3951106 GAGTGAAAAGAATAA CGCC TGAT GGCG CTGCGCTTATCAGGC CKO_04262 3951909 - 3951250 - | hypothetical protein CKO_04263 3952382 - 3952071 - | hypothetical protein CKO_04264 3952435 - 3953163 + | hypothetical protein CKO_04265 3953284 - 3954717 + | hypothetical protein TERM 5082 3954808 - 3954782 - T 100 -14.5 -6.09888 | gap 1 TCCGAATAAAAAAAA GCCGGGT-AGCG CTTG CGCTTACCCGGC CTACAGCATGGCAGA CKO_04266 3957701 - 3954828 - | glycine dehydrogenase TERM 5083 3955159 - 3955140 - G 87 -13.6 -3.27298 | CGGTTCAACCATCAA CGTTCCCG CCAC CGGGAACG ACATGGTCGGCGCGT TERM 5084 3957462 - 3957485 + g 70 -5.2 -4.4078 | AATGTAAGACGTGAA GCGCTTGTTG CGAC CGGCAATCGC TTTTAATTCGGCCAG CKO_04267 3957726 - 3957866 + | hypothetical protein CKO_04268 3958312 - 3957923 - | glycine cleavage system protein H CKO_04269 3959432 - 3958338 - | glycine cleavage system aminomethyltransferase T TERM 5085 3958861 - 3958873 + g 70 -9.1 -3.65046 | TCATAGCCTGCTTCG CCGGT ATA ACCGG TTGTTGCAATAAACA CKO_04270 3959471 - 3959746 + | hypothetical protein CKO_04271 3961050 - 3959884 - | hypothetical protein TERM 5086 3960555 - 3960567 + g 80 -9.1 -4.15044 | AATCCCAGAAGGTCA GCGGA ATA TCCGC TTTGTTGCGCAGCCA CKO_04272 3962407 - 3961229 - | 2-octaprenyl-6-methoxyphenyl hydroxylase CKO_04273 3963741 - 3962404 - | proline aminopeptidase P II CKO_04274 3964339 - 3963755 - | hypothetical protein TERM 5087 3964100 - 3964072 - G 77 -4.6 -4.87665 | opp_overlap 3964085 3964087, overlap 3964081 3964085 CTTCAGGCAGAAAAA GCTGAAAAAGGA AGCCG TCGTCTTCCAGC GCGTCGCTGGTTGCC TERM 5088 3964097 - 3964081 - G 81 -6.5 -4.7657 | opp_overlap 3964085 3964087, overlap 3964072 3964085 GAAAAAGCTGAAAAA GGAAGCC GTC GTCTTCC AGCGCGTCGCTGGTT TERM 5089 3964718 - 3964707 - g 72 -3.6 -4.77157 | overlap 3964714 3964715 TTAACTCAGGAAAAA GCGA AGAC CCGC GACTACGCGGCGAGC CKO_04275 3964500 - 3964829 + | Z-ring-associated protein TERM 5090 3965227 - 3965239 + G 89 -9.1 -4.57304 | CGTGGTTCTTGCCCA CACCG TCG CGGTG TTTCTTTCATTCGAT CKO_04277 3965075 - 3965677 + | putative ligase CKO_04278 3966999 - 3965767 - | D-3-phosphoglycerate dehydrogenase TERM 5091 3966431 - 3966444 + gT 74 -4.5 -4.70515 | overlap 3966430 3966432 TGTACCTGGGTCGCG TTGCC CAGC GGCAG TTTATTTTCAATATC CKO_04279 3967126 - 3966965 - | hypothetical protein CKO_04280 3967963 - 3967268 - | ribose-5-phosphate isomerase A TERM 5092 3968407 - 3968422 + G 78 -11.8 -3.29511 | GCGACCTGGCTGCTT CCGGCG CTGG CGCCGG TTCTGGCCGACTCGC CKO_04281 3968086 - 3968979 + | chromosome replication initiation inhibitor protein TERM 5093 3969002 - 3969044 + T 90 -12.9 -3.53444 | gap 1, opp_overlap 3969041, overlap 3969031 TGCCTGATGACGCTA CG-CTTATCAGGCCTACAGG TTAT TTTGTAGGCCGGATAAGGCG TTTACGCCGCCATCC CKO_04282 3969862 - 3969134 - | hypothetical protein TERM 5094 3969935 - 3969955 + r 79 -11.2 -3.34344 | opp_overlap 3969950 3969953 TTAGCGGGTATCTGC GCGTTGTC CATCA GACAACGC TTAGTTGAACAATGC CKO_04283 3970549 - 3969956 - | arginine exporter protein TERM 5095 3970237 - 3970260 + g 70 -6.7 -4.07687 | overlap 3970247 3970251 GCGGATTCAGCCACG TCACCGCCA GCATCG TGGCGATGA TTTTCCAGCGCCCCT CKO_04284 3970571 - 3970816 + | hypothetical protein CKO_04285 3971645 - 3970788 - | mechanosensitive channel MscS CKO_04286 3972707 - 3971775 - | DNA-binding transcriptional activator AllS TERM 5096 3972030 - 3972050 + gr 83 -6.1 -4.85599 | GGCCAGCTTGGTGCT GAGATCTGG AAC CTTGATCTC TTTTTGTCCGCTCAG TERM 5097 3972612 - 3972622 + gr 83 -8.2 -4.52589 | TATGCGATAGCTGAT CGCC GCT GGCG TTTTATGTAGCGAAC CKO_04287 3973380 - 3972625 - | hypothetical protein CKO_04288 3973579 - 3973442 - | hypothetical protein CKO_04289 3974854 - 3973592 - | hypothetical protein TERM 5098 3973621 - 3973633 + g 89 -9.1 -4.56597 | GATGCAACTCCGCCA GCGCT TCC AGCGC TTTTTCAAAGCAAAG TERM 5099 3973932 - 3973887 - G 71 -5.9 -4.36914 | gap 1, opp_overlap 3973887 3973887, overlap 3973888 CCTGCGCCGACAAAA CGCGTTACGCCAGGCGCGGCAA TCA TTGCCGCGCC-GCCGATCCCCA GTGTTTCCGTGATGG TERM 5100 3974769 - 3974803 + g 71 -7.8 -4.0075 | gap 1 GCCACCGCGTCTTTC GCCGGGCGTACCGCA ACCCAA TGTGG-GCGCGCGGC TTTGATTCGTTCAAT CKO_04290 3976532 - 3974871 - | membrane protein FdrA TERM 5101 3975305 - 3975323 + g 74 -4.4 -4.81851 | opp_overlap 3975291 3975286 ACAGCAGCACGCCCA CTGTCGGC ATT GCGGTCAG TTTTTCAATTTCAAT CKO_04291 3977769 - 3976546 - | hypothetical protein TERM 5102 3976629 - 3976619 - G 74 -6.8 -4.27886 | opp_overlap 3976619, overlap 3976620 GCTGAAACATAGAAA CTGG AAG CCAG ACTTCCGGTGATATC TERM 5103 3977715 - 3977703 - G 70 -5.5 -4.47259 | overlap 3977704 ACCAGAACAGGAAAA CGGTG ACC CACCA GGCCGGTATTCCTCT CKO_04292 3977826 - 3977954 + | hypothetical protein TERM 5104 3978008 - 3977994 - f 100 -8.6 -5.186 | TAAAAGAGATAAAAA CGCTAA GGA TTAGCG AGATATTTTTGTGGG TERM 5105 3978079 - 3978066 - f 75 -3.1 -5.10656 | ATGAAAATAACAAAA CGATA TTTT TACCG CGAGATATTTCGCAC TERM 5106 3978146 - 3978120 - g 84 -3 -5.3104 | gap 1, opp_overlap 3978121, overlap 3978121 TCATGAAAAAGAAAA TCGTCATTGCC CTTGGC GGCAATG-CGT TATTACAGCGCGGAG CKO_04293 3978107 - 3979012 + | carbamate kinase TERM 5107 3979123 - 3979104 - Tf 100 -12.2 -5.75945 | opp_overlap 3979104 ATCCGGCAAAAAAAA TGGCTTCC CGAA GGAAGCCA TTTTTACAATCAGCA TERM 5108 3979104 - 3979123 + TF 100 -12.2 -4.62069 | opp_overlap 3979104 ATCCGGCAAAAAAAA TGGCTTCC CGAA GGAAGCCA TTTTTACAATCAGCA CKO_04295 3980225 - 3979146 - | fructose-bisphosphate aldolase TERM 5109 3980275 - 3980262 - gR 79 -3.1 -5.24129 | gap 1, overlap 3980265 GGGCCTTAGAAAAAA CACGGG CCG CCC-TG AATGTCAGCACGGCA TERM 5110 3980322 - 3980296 - gR 83 -9.5 -4.18934 | gap 1, opp_overlap 3980296 3980319, overlap 3980300 CAGCACGGCAATAAA TCAACGGGCAGG AATC CCTGCCCGT-AA CGATTACTTCTTAGC CKO_04294 3980140 - 3980322 + | hypothetical protein TERM 5111 3980319 - 3980300 - TR 100 -15 -3.6914 | opp_overlap 3980296, overlap 3980296 ACGGCAATAAATCAA CGGGCAGG AATC CCTGCCCG TAACGATTACTTCTT CKO_04296 3981540 - 3980326 - | phosphoglycerate kinase CKO_04297 3982590 - 3981571 - | erythrose 4-phosphate dehydrogenase TERM 5112 3982904 - 3982887 - H 74 -8.5 -3.96148 | TTGCCGCATCACAAA TCCTGAT TTAT ATCAGGA AGTACGTGAGCCAGC TERM 5113 3983019 - 3983034 + G 80 -4.7 -5.02074 | TATGCGCTGCGCCTG CTTCC CGGCCA GGAAG TTTTTTCACAACTAC CKO_04298 3982965 - 3983390 + | hypothetical protein TERM 5114 3983438 - 3983450 + G 73 -9.1 -3.82031 | GTCGCCAGTTTTCCA GCCAG TCC CTGGC TTTGATCGTGATTGC TERM 5115 3983621 - 3983666 + G 76 -12.6 -2.79133 | gap 1, opp_overlap 3983621, overlap 3983625 3983627 TCTGGGGATTATTAA CCGATC-CCATCGCCGCCGCC TTTGC GCCGGTCGCGATGGTGATTGG TCTGGTCGCCGGTTG CKO_04299 3983416 - 3983994 + | hypothetical protein TERM 5116 3984467 - 3984438 - g 78 -12.1 -3.19463 | gap 1, opp_overlap 3984443 TCGATCATTCATGAA GCCCAGCGCGCCCG CGG CGTGC-CGCTGGAC GAACGTTGGTATCAG CKO_04300 3983994 - 3984701 + | hypothetical protein CKO_04301 3984689 - 3985366 + | hypothetical protein TERM 5117 3985590 - 3985575 - gT 72 -3.9 -4.74103 | opp_overlap 3985582 3985583, overlap 3985576 TGCGCAACGCAAAAA CCGCG AACGCG CGCAG ATTCTCGGCGTGCTG TERM 5118 3985583 - 3985603 + GT 70 -8.9 -3.34398 | opp_overlap 3985576 3985575, overlap 3985582 GCAAAAACCGCGAAC GCGCGCAGA TTC TCGGCGTGC TGTTTCAGGAAGCGG TERM 5119 3985775 - 3985787 + GT 72 -10.5 -2.82987 | overlap 3985767 CGTTAGATCTTCATA CGGCG CAA CGCCG TATGGTCGCTGTTGC CKO_04303 3986734 - 3986000 - | putative fructose transport system kinase CKO_04302 3985360 - 3986067 + | hypothetical protein TERM 5120 3986248 - 3986264 + gT 74 -10.8 -3.28712 | opp_overlap 3986237 AATACTGCCGTAGCT CGCGCC AGGAC GGCGCG TTATACAACAGCCAG CKO_04304 3987240 - 3986731 - | putative DNA-binding transcriptional regulator CKO_04305 3988227 - 3987256 - | fructose-1,6-bisphosphatase II-like protein TERM 5121 3988169 - 3988188 + g 84 -13.6 -3.09516 | overlap 3988171 CATCCGGTTTGCGGC CAGGCAGC AAGC GCTGCCTG TTCCGTAATCCGAAA CKO_04306 3989501 - 3988224 - | hypothetical protein TERM 5122 3988817 - 3988841 + g 78 -2.6 -5.1925 | overlap 3988819 GCTCAATCCCCTTCG CCGCCGCCAG CTCGA CCGGCAGCAG TTTTTTCGCTTGTGA TERM 5123 3989526 - 3989540 + r 75 -2.8 -5.12617 | GAAAAATTGATGATG CTAATC CGC GATGAG TTTTTTAAATAATTC CKO_04307 3990908 - 3989526 - | hypothetical protein TERM 5124 3989844 - 3989862 + g 75 -11.8 -2.88074 | overlap 3989842 3989841 CATTGCTTTCACGGC TTTCGCAG ACT CTGCGAAA TGGTCTTCTTCATTC CKO_04308 3991376 - 3990936 - | putative mannitol phosphotransferase subunit EIIA TERM 5125 3991069 - 3991100 + g 70 -5.2 -4.42788 | opp_overlap 3991075 TCCGCATCTGCGGCG GATAAACCGATTAA TAAT TTGATCGGATCATC TTTTGTAAACTTCAC TERM 5126 3991671 - 3991652 - R 100 -12.8 -5.24129 | opp_overlap 3991652 3991657 3991660 TTCCTTTATAAAAAA CGGGCCGC CTGA GCGACCCG TTCGGTGTTGTATCG TERM 5127 3991652 - 3991671 + r 74 -10.6 -3.23183 | opp_overlap 3991652, overlap 3991657 3991660 TTCCTTTATAAAAAA CGGGCCGC CTGA GCGACCCG TTCGGTGTTGTATCG CKO_04309 3993711 - 3991690 - | transketolase TERM 5128 3992985 - 3993006 + g 76 -10.1 -3.794 | GTTTGTCAGTAACGG CGCGCGCTT CTTC AACCGCGCG TTTAATCGCTTCAGC CKO_04311 3994032 - 3993817 - | hypothetical protein TERM 5129 3994148 - 3994136 - gR 70 -9.1 -3.31196 | overlap 3994144 GGAAATGGACAGCAA GGCGA CAA TCGCC CCGGCCAGCAGCGAA CKO_04310 3994032 - 3994718 + | hypothetical protein TERM 5130 3994743 - 3994722 - TR 79 -2.9 -5.33405 | opp_overlap 3994722 3994725, overlap 3994725 GGTATTAAATAAAAA CGAGAGCAA CATG TAGCTCTTG TTAGCTGTTCCGTTC CKO_04312 3995388 - 3994894 - | hypothetical protein TERM 5131 3996081 - 3996064 - g 83 -9.9 -4.09685 | overlap 3996033 TCCGATCTGGCAAAA TTTGGCG CAAC CGCCAAA ATGCGCATCTCCAAC CKO_04313 3995710 - 3996978 + | hypothetical protein TERM 5132 3997010 - 3996986 - T 95 -12.9 -4.27316 | TCTTTTAAGTTAAAA CCCCTCTCC TGATGAC GGAGAGGGG GAAGCACTTATTCGC CKO_04314 3997938 - 3997018 - | agmatinase TERM 5133 3997987 - 3998021 + r 79 -11.4 -3.40867 | opp_overlap 3997987 ACAGATGAAAAAAAA TCCCCTCCGCGTCG TTAAACC CGACGAGGAAGGGA TTGATTCGTAAATCG TERM 5134 3998021 - 3997987 - R 100 -13.6 -5.92337 | opp_overlap 3997987 ACAGATGAAAAAAAA TCCCCTCCGCGTCG TTAAACC CGACGAGGAAGGGA TTGATTCGTAAATCG CKO_04315 3998162 - 3998001 - | hypothetical protein CKO_04316 4000082 - 3998169 - | arginine decarboxylase TERM 5135 3998474 - 3998464 - G 78 -6.8 -4.59342 | CCGACCATAAAGAAA CCGA GCA TCGG CGGGTTCTCTGGATC TERM 5136 4000362 - 4000345 - H 81 -8.5 -4.52703 | opp_overlap 4000335 4000357, overlap 4000335 GAAACCACGAGAAAA CTCTTGT TTCA ACAAGAG CGCCCTTGTTCAGTC TERM 5137 4000598 - 4000622 + H 78 -5.8 -4.8048 | overlap 4000602 GCCCGGCTGGAAGTG GCGACACGA-GG AAT CCGTCGTGT-GC TTTTTAGTATGAGCC TERM 5138 4000637 - 4000647 + H 79 -8.2 -4.36914 | CTTTTTAGTATGAGC CGCG CGC CGCG TTTTATACCGACAAG TERM 5139 4001412 - 4001400 - g 89 -9.1 -4.59853 | overlap 4001402 TGAAGTGCGTAAAAA CGGCA CGC TGCCG TGGCTGCGCCCGGAT CKO_04317 4000936 - 4002090 + | S-adenosylmethionine synthetase TERM 5140 4002114 - 4002132 + F 100 -11.7 -4.84918 | CGTTGCTTTTTTTAA GGCCAGC CTCGT GCTGGCC TTTTGTATTTGTGCG TERM 5141 4003102 - 4003116 + G 84 -9.2 -4.24342 | overlap 4003096 AGCCCGCGCTGGTTC GCGGCG AAA CGTCGC TTTATTGATGCCGAA CKO_04318 4002508 - 4003902 + | hypothetical protein CKO_04319 4003962 - 4004558 + | hypothetical protein TERM 5142 4004750 - 4004786 + G 72 -4.1 -4.72986 | opp_overlap 4004750 4004751, overlap 4004751 TTTCTCAGGCCAAAA CCGCCGGGGTCAAAGTC AAT GCCGATGTTCCCGGCGA TTTTTACTGCGGGTG TERM 5143 4004847 - 4004827 - g 74 -2.3 -5.0538 | TGGCAGGGTAAAAAA GGCGTCGTG GAT CTCGCCTCC TGCGGCTATAAAGTC CKO_04320 4004653 - 4005360 + | hypothetical protein CKO_04321 4005405 - 4006169 + | hypothetical protein CKO_04322 4006182 - 4007129 + | glutathione synthetase CKO_04323 4007306 - 4007869 + | hypothetical protein CKO_04325 4008471 - 4008049 - | hypothetical protein CKO_04324 4007869 - 4008285 + | Holliday junction resolvase-like protein TERM 5144 4008473 - 4008433 - GT 72 -8.9 -3.53761 | CAACCGTTCGCTAAA GCCTGCCCTGCGCCTGC CGCTGTT GCAGACTCTGGGCAAAC GTCTGCATCCCCGCC CKO_04326 4009408 - 4008428 - | hypothetical protein CKO_04327 4009426 - 4010130 + | hypothetical protein CKO_04328 4010149 - 4010715 + | hypothetical protein CKO_04329 4010712 - 4011002 + | hypothetical protein CKO_04330 4011010 - 4011603 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 5145 4012008 - 4011998 - g 81 -8.2 -4.29845 | overlap 4011986 GAACCGAAGCTAAAA CGCC TCG GGCG CATTCACGGCCCGGA TERM 5146 4012458 - 4012446 - g 71 -6.2 -4.30576 | opp_overlap 4012446 TGCGTACCACTAAAA CGCG TCACC CGCG CGGTTATATGCAGGG CKO_04331 4011596 - 4012732 + | coproporphyrinogen III oxidase CKO_04332 4013897 - 4012851 - | L-asparaginase II TERM 5147 4014067 - 4014046 - R 100 -12.3 -4.75289 | overlap 4014047 TATGACAACATAAAA CGGCACAGC AGGC GCTGTGCCA TAGACAAGAGTTTTA TERM 5148 4014066 - 4014047 - R 90 -13.6 -3.44089 | overlap 4014046 ATGACAACATAAAAC GGCACAGC AGGC GCTGTGCC ATAGACAAGAGTTTT CKO_04333 4014799 - 4014080 - | hypothetical protein TERM 5149 4014814 - 4014847 + r 74 -7.3 -4.24342 | opp_overlap 4014819 4014820, overlap 4014815 4014820 TAACTTTCCCTCAAG ACAAATCGGGCCAGC AAAT GCTGGCCCCGTATGC TTTATTAGTCCCACC TERM 5150 4014815 - 4014846 + r 74 -10.8 -3.14284 | opp_overlap 4014819 4014820, overlap 4014814 4014820 AACTTTCCCTCAAGA CAAATCGGGCCAGC AAAT GCTGGCCCCGTATG CTTTATTAGTCCCAC TERM 5151 4014842 - 4014819 - R 73 -8 -4.1891 | opp_overlap 4014815 4014814 4014820, overlap 4014820 TTCCCTCAAGACAAA TCGGGCCAGC AAAT GCTGGCCCCG TATGCTTTATTAGTC TERM 5152 4014841 - 4014820 - R 75 -11.5 -3.11024 | opp_overlap 4014815 4014814 4014820, overlap 4014819 TCCCTCAAGACAAAT CGGGCCAGC AAAT GCTGGCCCC GTATGCTTTATTAGT TERM 5153 4014820 - 4014842 + r 77 -11.3 -3.11832 | gap 1, opp_overlap 4014820 4014819, overlap 4014815 4014814 TCCCTCAAGACAAAT C-GGGCCAGC AAAT GCTGGCCCCG TATGCTTTATTAGTC CKO_04334 4015178 - 4014852 - | hypothetical protein TERM 5154 4015000 - 4015016 + g 75 -6.5 -4.46514 | opp_overlap 4015012 CAGGACAGATAACCG CTGCCGT CAA ACGCCAG TTTATTTGGCTCAAT CKO_04335 4015939 - 4015178 - | tRNA (guanine-N(7))-methyltransferase CKO_04336 4015960 - 4017111 + | adenine DNA glycosylase TERM 5155 4017322 - 4017302 - g 72 -4 -4.78981 | ATCAACGAAAAGAAA CTCAACAT GATGA ACGTCGAG CACCGCAAACTGCTG CKO_04337 4017140 - 4017415 + | hypothetical protein TERM 5156 4018384 - 4018440 + G 71 -4.9 -4.53303 | gap 1, opp_overlap 4018415 TTGATAATCCGACAT CGCGTCGTTACGCGGTGATCACCGCC TATAAC GGCGGTGCAGGCAGCGTGTTG-CGCG TTTTCTCTAACGATA CKO_04338 4017510 - 4018595 + | murein transglycosylase C TERM 5157 4018641 - 4018596 - f 100 -15.4 -3.34013 | opp_overlap 4018594 TACCGTCGGAAGTAA TCTCGCCGTTCCCGCCCCCG ATCGCA CTGGGGCGGGAAGGCCGAAA AGTGTTAACTCCATC TERM 5158 4019430 - 4019440 + G 74 -2.4 -5.11389 | GCTGTTCAAAAACAA ACGC ATG GCGA TTTTCTTTATCTTCT CKO_04339 4018807 - 4020063 + | hypothetical protein CKO_04340 4022271 - 4020136 - | ornithine decarboxylase TERM 5159 4021176 - 4021163 - G 73 -5.2 -4.56597 | opp_overlap 4021172 TTGTGCGGGCAAAAA CGCG CCTGAC CGCG AATGTGGTTGTCCTT TERM 5160 4022113 - 4022092 - G 70 -5.1 -4.42974 | GTCAGAGAGAATAAA CACCGGC AACTGAAA ACCGGTG CGTTTAAGCAATGCC TERM 5161 4022293 - 4022283 - R 84 -8.2 -4.6902 | TCATAAGCGCAAAAA CCCG TTT CGGG AGAATAGAAGTCCCG CKO_04341 4022683 - 4022378 - | hypothetical protein CKO_04342 4022699 - 4023406 + | hypothetical protein TERM 5162 4023382 - 4023394 + F 83 -6.2 -5.08824 | GATGCCGCTTTCCGC CGCG TGGAC CGCG TTTTTTGCCTGAAAA TERM 5163 4023554 - 4023538 - f 73 -10.9 -2.62616 | opp_overlap 4023537 4023536 4023533 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA CKO_04344 4024136 - 4024291 + | hypothetical protein CKO_04345 4025102 - 4024731 - | hypothetical protein CKO_04346 4025352 - 4025131 - | hypothetical protein TERM 5164 4025208 - 4025182 - G 78 -6.4 -4.73682 | opp_overlap 4025189 GGCGATAATATAAAA CAGCTCTCCCGG ACG CTGGGTGATCTG CGGTGGATGTTCCAG TERM 5165 4025388 - 4025400 + r 74 -5.5 -4.68655 | opp_overlap 4025388 TGAGTAACAGAAAGA CGGTC AGC GACTG TTTATTTTCGCATTA CKO_04347 4025576 - 4025418 - | hypothetical protein TERM 5166 4025968 - 4025952 - g 83 -10.9 -3.99324 | CTGGATGATGAGAAA TTCAGCG TCC CGCTGAA CTCTGCCGTCATTCT CKO_04348 4025748 - 4026494 + | hypothetical protein CKO_04350 4026630 - 4026466 - | hypothetical protein CKO_04351 4027057 - 4026647 - | hypothetical protein CKO_04349 4026527 - 4026742 + | hypothetical protein TERM 5167 4026830 - 4026806 - GT 70 -2.9 -4.73677 | GCCAGAACAAATAAA CAGCAAAAT TGACAAT AATTTGCTG ATATAGTCCGACTTT CKO_04352 4027315 - 4027061 - | hypothetical protein TERM 5168 4027230 - 4027252 + g 100 -13.4 -5.03994 | ATCCCTTTGCTATAT CGCCAGGTAC CCA GCACCTGGCG TTTTTGTATATACCG CKO_04353 4027657 - 4027493 - | hypothetical protein CKO_04354 4028090 - 4027947 - | hypothetical protein CKO_04355 4028981 - 4028406 - | hypothetical protein CKO_04356 4029948 - 4028989 - | hypothetical protein CKO_04357 4030078 - 4030329 + | hypothetical protein TERM 5169 4030341 - 4030368 + F 87 -11.4 -3.87149 | gap 1, opp_overlap 4030341 TTAAGTCTTAACCTA CAGCACTCTTGCT AAA GGCA-GAGTGCTG TTTCGATTTCGTCCA TERM 5170 4030368 - 4030341 - f 70 -10.7 -2.53911 | gap 1, opp_overlap 4030341 TTAAGTCTTAACCTA CAGCACTCTTGC TAAAG GCA-GAGTGCTG TTTCGATTTCGTCCA CKO_04358 4030564 - 4030713 + | hypothetical protein CKO_04359 4030803 - 4031501 + | hypothetical protein CKO_04360 4031502 - 4032110 + | hypothetical protein TERM 5171 4032740 - 4032754 + GF 80 -4.3 -5.0133 | overlap 4032714 ACACGATTGTGGTCT GAAGA GGGAA TCTTC TTTTTTGAAAAACTG TERM 5172 4033786 - 4033739 - gf 71 -7 -4.14243 | overlap 4033746 GATGCCACTGCAAAA GAGCAAATCTATATGCATGCCC AGAA GGACATGCAAACAGAGGTGCTG AATGACAAAACTACC TERM 5173 4033779 - 4033746 - gf 89 -11.1 -4.07678 | overlap 4033739 CTGCAAAAGAGCAAA TCTATATGCATGCCC AGAA GGACATGCAAACAGA GGTGCTGAATGACAA TERM 5174 4034008 - 4033990 - gf 74 -2.4 -4.99035 | gap 1, overlap 4034002 4034005 GGATCGAGAGAAAAA CGTC-GG AGGCAA CCAGACG GTCACCATCACGGGT CKO_04361 4032254 - 4034254 + | hypothetical protein CKO_04363 4036295 - 4034448 - | hypothetical protein CKO_04362 4034211 - 4034705 + | hypothetical protein CKO_04364 4037040 - 4036333 - | hypothetical protein TERM 5175 4037045 - 4037090 + r 100 -12.7 -5.84381 | opp_overlap 4037042, overlap 4037046 AACATAATCATACTC CTTCACCTCCCTCTCTCCT CCTCTCCC AGGAGAGGGGGAAGTGAAA TTTTTTTATTCGTAA TERM 5176 4037046 - 4037089 + r 100 -16.2 -4.09002 | opp_overlap 4037042, overlap 4037045 ACATAATCATACTCC TTCACCTCCCTCTCTCCT CCTCTCCC AGGAGAGGGGGAAGTGAA ATTTTTTTATTCGTA CKO_04365 4037623 - 4037096 - | hypothetical protein TERM 5177 4037731 - 4037719 - R 95 -2.7 -5.93252 | GGTAAAAATAAAAAA TTAAC ATT GCTAA AAGTTCTCAACATAA TERM 5178 4038052 - 4038068 + r 74 -3.7 -4.99043 | TCATTTACCCCATTT TCCTG TCATGCC CAGGA TTTTATTTCTCACGA CKO_04366 4038456 - 4038331 - | hypothetical protein CKO_04367 4038520 - 4039164 + | DNA-binding transcriptional activator EvgA TERM 5179 4040828 - 4040863 + G 70 -9.8 -3.31501 | gap 1, opp_overlap 4040862 CAGCTTGCTGTGGGC CGTTTACCTGTCGCGGA AAG TCCGCCAAAGG-AAACG TTCTCAACGCTTACT TERM 5180 4041191 - 4041175 - g 95 -3 -5.86976 | gap 1, overlap 4041178 TGATAAAAGAAAAAA TGACGCT GTTT AGCG-CA CTGGCGGCCCAAAAA TERM 5181 4041928 - 4041943 + G 70 -9 -3.63922 | opp_overlap 4041939, overlap 4041926 AACGCTGTCTTGCGG CAGGCA TGAA TGCCTG TATTTTCAAGCCGAT CKO_04368 4039164 - 4042346 + | hypothetical protein CKO_04369 4042803 - 4043375 + | hypothetical protein CKO_04370 4043448 - 4043966 + | hypothetical protein TERM 5182 4043990 - 4043969 - f 74 -7.2 -4.3129 | opp_overlap 4043968 4043981 4043983 4043986, overlap 4043970 TATTTACCAGTAAAA GCAGGGCC CTTCGC GGCCCTGA GTAATTCACTCAGGA TERM 5183 4043989 - 4043970 - f 74 -10.7 -3.18292 | opp_overlap 4043968 4043981 4043983 4043986, overlap 4043969 ATTTACCAGTAAAAG CAGGGCC CTTCGC GGCCCTG AGTAATTCACTCAGG CKO_04371 4044013 - 4044690 + | hypothetical protein TERM 5184 4046394 - 4046384 - g 70 -5.4 -4.48987 | opp_overlap 4046384, overlap 4046392 CTGGCACAATGAAAA CGAT CAT ATCG TCTCTCTGACGATGC TERM 5185 4046485 - 4046475 - g 85 -2.4 -5.54885 | overlap 4046476 AACAGCAACAAAAAA GGCG ATA CGAC TTCGCAGGTGGGGTT CKO_04372 4044702 - 4047203 + | hypothetical protein CKO_04373 4047194 - 4048234 + | hypothetical protein CKO_04374 4048713 - 4048288 - | hypothetical protein TERM 5186 4048531 - 4048519 - G 71 -4.8 -4.56597 | CTCCTGCGGTAAAAA GCAG CGGAT CTGC CCAAGTGAAAAACCG CKO_04375 4048902 - 4049732 + | hypothetical protein TERM 5187 4050746 - 4050719 - g 74 -8.4 -3.98661 | gap 1, opp_overlap 4050709 CACAGGGAGTACAAA CGCCTGTTTGGCA TCA CGCCAATC-GGCG ATAAAGTGCAGTCGC CKO_04376 4049822 - 4050817 + | hypothetical protein TERM 5188 4050822 - 4050858 + T 70 -8.8 -3.35992 | opp_overlap 4050822 TACCGCGCTGATACA CGCATATCGGACCG CAAAACAGC CGATCCGATATGTG TTGCTTACCGTCAGT CKO_04377 4051924 - 4050869 - | hypothetical protein CKO_04378 4052087 - 4051863 - | hypothetical protein CKO_04379 4053969 - 4052107 - | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase TERM 5189 4052348 - 4052397 + g 71 -10.8 -3.27476 | gap 3, overlap 4052360 ACCAGATCGATATTG CTGCCGCAGCGCCCGGCGAT-CGGT TTC ACCGCATAGCCGG-TGC-GCGCCAG TTCGTCATTAACCGT TERM 5190 4053644 - 4053618 - G 77 -11.4 -3.48276 | overlap 4053621 CGTTTTGCCAGATAA GCAGCGCGCCAG CGA CCGGCGCGCGGG GCGAACCATTGGGGA TERM 5191 4053641 - 4053621 - G 87 -16.1 -2.88822 | overlap 4053618 TTTGCCAGATAAGCA GCGCGCCAG CGA CCGGCGCGC GGGGCGAACCATTGG CKO_04380 4056416 - 4054128 - | hypothetical protein TERM 5192 4055546 - 4055569 + g 74 -6.6 -4.30416 | CCTTCATCATGCCTT TGAGCAGCGA CGCA TCGCCGCCCA TTTTCACTTGGTAGT TERM 5193 4057096 - 4057120 + G 71 -8.4 -3.80858 | overlap 4057095 ATTCTGGCTCCAGGG GGCGGCGCCG TTCCT CGGCGGCGGC TTTGGTCACTTCTAC CKO_04381 4056638 - 4057507 + | putative glutathione S-transferase YghU CKO_04382 4058288 - 4057605 - | hypothetical protein CKO_04383 4059340 - 4058288 - | hypothetical protein TERM 5194 4058580 - 4058560 - G 80 -4.7 -5.07486 | opp_overlap 4058574 GATCCTGAACAAAAA TCACCTG CGGATTC CAGGCGA TAACCTGTTCCATTG TERM 5195 4059329 - 4059301 - G 74 -2.3 -5.09225 | overlap 4059305 ACGGCAGGGAAAAAA GCAACGCCAGC AGGGAGA GCTGGCGTAAG GATTTAAACATGGGA TERM 5196 4059325 - 4059305 - G 80 -9.7 -3.94773 | overlap 4059301 CAGGGAAAAAAGCAA CGCCAGC AGGGAGA GCTGGCG TAAGGATTTAAACAT CKO_04384 4059668 - 4059420 - | hydrogenase 2 accessory protein HypG CKO_04385 4060027 - 4059686 - | hydrogenase nickel incorporation protein HybF CKO_04386 4060511 - 4060020 - | hydrogenase 2-specific chaperone CKO_04387 4060998 - 4060504 - | hydrogenase 2 maturation endopeptidase CKO_04388 4062701 - 4060998 - | hydrogenase 2 large subunit TERM 5197 4061093 - 4061105 + g 74 -3.3 -4.87665 | opp_overlap 4061084 AGTGAATGGTACGCA CCACT TCC AGCGG TTTTTCTGGATCGGC TERM 5198 4062038 - 4062067 + g 77 -8.5 -4.07568 | gap 1 TCGGGTTCGCCACCC CGCC-CACCGCCAG GTT CTGGATGTGCGGCG TTTTACCGCCCAGCA TERM 5199 4062720 - 4062731 + r 79 -4.4 -5.13722 | overlap 4062709 TTGCTCGCCTCATGA CGAT TGTG ATCG TTTTGTTTTAATGGA CKO_04389 4063876 - 4062698 - | putative hydrogenase 2 b cytochrome subunit CKO_04390 4064735 - 4063866 - | hydrogenase 2 protein HybA TERM 5200 4063892 - 4063902 + g 72 -2.4 -4.87626 | GATCGTCTCCTCCGT CGTG ATG CTCG TTTTTCGTATTACGA TERM 5201 4064157 - 4064204 + g 73 -5.5 -4.59773 | gap 1, overlap 4064184 ATCGCCAGTCTGCAA CGTCTGGCGC-GGATAGTGGTA TTCGC TGCCAGGCTTCAGCGCCAGGCG TTTTTGCGCCTCCGC TERM 5202 4064509 - 4064522 + g 74 -6.7 -4.29106 | CAGTTAGGGTCAACG CAGTG CATA CACTG TTTCTTAATGTACGC CKO_04391 4065973 - 4064855 - | hydrogenase 2 small subunit TERM 5203 4065944 - 4065924 - G 70 -9 -3.75461 | CAAAGCTTCATGAAA TCACGACG ATTAA CGCCGTGA GAAGTGATGAGAGTA CKO_04392 4066448 - 4066161 - | hypothetical protein TERM 5204 4066285 - 4066309 + g 80 -4.9 -5.02074 | overlap 4066278 AGAATCCCCGCTTCC CAGGCGCTTAA TTG TCGATCGCCTG TTTTTTCAAACATGC TERM 5205 4066460 - 4066485 + rH 100 -12.1 -5.00616 | CCATGATACCTCCAA TCGCTATATAA CAAA TTATATAGCGA TTTTTTAAGCGAACG TERM 5206 4066507 - 4066517 + rH 89 -4 -5.75945 | AAGCGAACGCCAGAG GTAT CAC ATAC TTTTTTTTACCGGAT CKO_04394 4068217 - 4066532 - | hypothetical protein TERM 5207 4066685 - 4066724 + gH 80 -7 -4.67982 | gap 1 CGTTTGCCGTTCCAG CGCCGCCGCTGCCGCAGAA ACT TGCTCCACCAGCG-CGGCG TTTTGTTGGGTCACG TERM 5208 4067501 - 4067524 + gH 72 -8.1 -3.6608 | CGCAATCTGGCGGAA CTGTTGGCG AATGCG CGCCAGCGG TTTCACTAACATCGT TERM 5209 4067831 - 4067865 + gH 75 -6.2 -4.43213 | opp_overlap 4067824, overlap 4067832 4067854 TGCCAATACCGCAGC GGCGATCTCCGGGTCC ATC GGCCCTGGAGAGAGCG TTTTCATCTCTTCCA TERM 5210 4067832 - 4067864 + gH 71 -9.7 -3.25205 | opp_overlap 4067824, overlap 4067831 4067854 GCCAATACCGCAGCG GCGATCTCCGGGTCC ATC GGCCCTGGAGAGAGC GTTTTCATCTCTTCC CKO_04393 4068158 - 4068334 + | hypothetical protein TERM 5211 4068350 - 4068335 - TR 72 -9 -3.64915 | overlap 4068329 GCTTATAAAGCATAA CGGCAT TATT ATGCCG CAAAGCAATATGCCG CKO_04395 4069345 - 4068389 - | hypothetical protein TERM 5212 4069175 - 4069195 + g 74 -9.7 -3.68853 | GACGGCATACTTTGC CGCGAGGTT AAG AAACTCGCG TTTAGAGATTTTTCC CKO_04396 4069433 - 4070473 + | aldo-keto reductase CKO_04397 4071040 - 4070537 - | hypothetical protein TERM 5213 4071124 - 4071112 - H 81 -4.9 -5.24129 | overlap 4071117 CTGCCTTATAAAAAA CAATA TAC TATTG ATAGTAAAGGACATT CKO_04398 4071145 - 4071549 + | hypothetical protein TERM 5214 4071676 - 4071655 - g 77 -3.6 -5.07486 | overlap 4071656 TATCGCCAATAAAAA CGCGACCC TCGAAC AGGTGGCG CAGGAGATCGTGTCG CKO_04399 4071551 - 4071973 + | hypothetical protein TERM 5215 4072047 - 4072076 + T 82 -13.5 -3.052 | opp_overlap 4072048 ATCAGGCAATAAAAA AGCCGGGTACGGC TTGC GCCCTACCCGGCC TGTCTGTCTGCCCAT TERM 5216 4072075 - 4072048 - T 100 -17 -5.4833 | opp_overlap 4072047 TCAGGCAATAAAAAA GCCGGGTACGGC TTGC GCCCTACCCGGC CTGTCTGTCTGCCCA CKO_04400 4072529 - 4072104 - | biopolymer transport protein ExbD CKO_04401 4073255 - 4072536 - | biopolymer transport protein ExbB TERM 5217 4073681 - 4073650 - g 78 -6.4 -4.78149 | opp_overlap 4073665 4073666 CGTAGAAGCCAAAAA GCACGCCACCCGCA ACCG CGCCAATGGCGAGC TTTTCTATGGCCGTC TERM 5218 4074586 - 4074611 + G 71 -9.7 -3.51232 | gap 1, opp_overlap 4074585, overlap 4074582 CCAGCCGGAACATAT CGCCGCCATTCG TCC CGAA-GGCGACG TTGATTTCACCGGCA CKO_04402 4073444 - 4074709 + | cystathionine beta-lyase TERM 5219 4074961 - 4074975 + G 70 -7 -4.13561 | opp_overlap 4074961 4074960 CTATTTTTAGAAAAC GGCCTG CTC CCGGCC TCTTTTTTACCCGGA CKO_04403 4074841 - 4075500 + | hypothetical protein CKO_04404 4076465 - 4075548 - | hypothetical protein TERM 5220 4075663 - 4075629 - G 81 -12.8 -3.06133 | opp_overlap 4075647 GAACTCCCGACTGAA CTGCGACGCGCTCTCG TAG CCAACGCGCATCGCAG CGGCGCTGGCTTTCA CKO_04405 4076480 - 4076629 + | hypothetical protein TERM 5221 4077544 - 4077529 - g 77 -4.6 -4.8622 | CTGTGGAATGAAAAA CGCGAT ACCA AACGCG CCAAACTGTTGCAGT CKO_04406 4076641 - 4077804 + | hypothetical protein TERM 5222 4077888 - 4077863 - f 100 -15.5 -3.55368 | overlap 4077864 ACTTAAGTCACACAA CCTCACCGGAG TTTG CTCCGGTGAGA TCGCATAAAGGAGGA TERM 5223 4077887 - 4077864 - f 95 -16.8 -2.72739 | overlap 4077863 CTTAAGTCACACAAC CTCACCGGAG TTTG CTCCGGTGAG ATCGCATAAAGGAGG TERM 5224 4078376 - 4078362 - g 70 -9.2 -3.76224 | GTCTGATCGATGAAA CCGGCG TTA CACCGG TGATCAACCAGATCG TERM 5225 4078470 - 4078493 + G 74 -7.3 -4.18018 | overlap 4078467 CCGAGTCCTGGAGCC CGCTGGCGC AAGGCG GCGCAGGCG TTTTCGATCAGAAAA CKO_04407 4077908 - 4078735 + | 2,5-diketo-D-gluconate reductase A TERM 5226 4078748 - 4078767 + F 100 -13.6 -4.67353 | TAACCTTCCTTTCCG GCCCGACA TTTC TGTCGGGC TTTTTGACTACCTGG TERM 5227 4079071 - 4079099 + G 100 -11.7 -5.03747 | opp_overlap 4079070 4079069, overlap 4079073 AAAAGCTGGATAACG CCTTCCCGGACGT GGG ACGTACGGGAATG TTTTTTGAAGGATTT TERM 5228 4079073 - 4079097 + G 95 -12.9 -4.13963 | opp_overlap 4079070 4079069, overlap 4079071 AAGCTGGATAACGCC TTCCCGGACGT GGG ACGTACGGGAA TGTTTTTTGAAGGAT TERM 5229 4079287 - 4079268 - g 100 -15 -4.77036 | opp_overlap 4079266 GCGGATGACGAAAAA CTGGCGGC GCTG GCCGCCAG AATTCGTGAAGCGAA CKO_04408 4078848 - 4079309 + | hypothetical protein TERM 5230 4079361 - 4079310 - T 70 -8.9 -3.43564 | gap 2, opp_overlap 4079299 4079310 4079311 4079331 GAAGCGAACGCATAA TCCGTCCGTTTGCCGGATAGCGGTG CAAG CACCT-TATCCGGCAAACAG-CTAA CGGGTTTAACGTCCG CKO_04409 4081538 - 4079367 - | hypothetical protein TERM 5231 4080840 - 4080851 + g 71 -7.2 -3.9281 | overlap 4080836 ATCAACCCCACTCCA GCCC GGCA GGGC TTCTTTAACAATAAT CKO_04410 4083055 - 4081643 - | repressor protein for FtsI TERM 5232 4083133 - 4083157 + r 83 -10.7 -3.79519 | overlap 4083146 ACACTGATTCAGACT TTGCCGGTCGC TTC GCGATCTGCAA TTTCCTGATCGAGTT CKO_04411 4083863 - 4083126 - | hypothetical protein CKO_04412 4086362 - 4084104 - | DNA topoisomerase IV subunit A TERM 5233 4086484 - 4086467 - R 100 -14.1 -5.38958 | opp_overlap 4086482 AGTCACAAAGAAAAA GGGCCGC GAGT GCGGCCC TGATGGGGTTTATTT CKO_04413 4086886 - 4086494 - | hypothetical protein TERM 5234 4087167 - 4087154 - g 74 -8.1 -3.9392 | opp_overlap 4087151 4087154 CGTCAGGGTAAAGAA GCGCT CTAC AGCGC GCCTTATGATGCGGT CKO_04414 4087040 - 4087699 + | DNA-binding transcriptional regulator QseB TERM 5235 4087724 - 4087738 + G 71 -4.2 -4.56153 | AACGTCTCAGCCTGC GCGTCA GGC TCACGC TTATTTTTCTGATAC TERM 5236 4087917 - 4087883 - g 80 -10.7 -3.91911 | TGGATGTCAACGAAA TCTCGGCGCCTGAAC GGATG GCGCAGACGCCGAAA AAATTGAAGCATGGT CKO_04415 4087696 - 4089045 + | sensor protein QseC TERM 5237 4089065 - 4089084 + F 70 -5 -4.39386 | opp_overlap 4089057, overlap 4089065 GAGATTATTGCGCGA TGAGCAAA AGAC TTTGCACA TTTTGCTCATTTCGC CKO_04416 4089155 - 4089736 + | hypothetical protein CKO_04417 4089767 - 4090081 + | hypothetical protein CKO_04418 4091389 - 4090199 - | hypothetical protein CKO_04419 4092692 - 4091424 - | hypothetical protein TERM 5238 4092674 - 4092684 + g 72 -4 -4.7373 | ATTCAGTTCTGTTAT TTGT TGA ACAA TTTTTCATACCATCC CKO_04420 4094545 - 4092725 - | hypothetical protein TERM 5239 4094330 - 4094315 - G 71 -8.2 -3.80014 | ATACTTATCAGCAAA CGGCAC CTCA GCGCCG CCAGCCATCAGAGGA TERM 5240 4094673 - 4094653 - H 79 -4.1 -5.09895 | CAGTGATTGAAAAAA TTTAAAAAC AAG GTTTATAAA TCAGAATTCAGCGGC TERM 5241 4094745 - 4094785 + G 73 -9.2 -3.76968 | gap 1, opp_overlap 4094748, overlap 4094748 4094753 4094758 AGGAACATCTGGAAC TGATCGCGCTCAATGACGC CATT GCGTCATTTAGT-CGATTA TTTGCTAACTCGGTT TERM 5242 4094748 - 4094782 + G 76 -8.7 -4.015 | gap 1, opp_overlap 4094748, overlap 4094745 4094753 4094758 AACATCTGGAACTGA TCGCGCTCAATGACGC CATT GCGTCATTTAGT-CGA TTATTTGCTAACTCG TERM 5243 4094758 - 4094773 + G 73 -9 -3.82531 | opp_overlap 4094748, overlap 4094753 4094748 4094745 ACTGATCGCGCTCAA TGACGC CATT GCGTCA TTTAGTCGATTATTT CKO_04421 4094711 - 4095562 + | hypothetical protein TERM 5244 4095577 - 4095625 + T 82 -13.1 -3.10641 | opp_overlap 4095564 4095563 4095559 ACGCCGGATGACGCT TCGCTTATCCGGCCTACGGGCAC AAT GCGAGCGTAGGCCGGATAAGGCA TTCAATGGTCGATTA CKO_04422 4097530 - 4095638 - | DNA topoisomerase IV subunit B CKO_04423 4098140 - 4097559 - | esterase YqiA TERM 5245 4097958 - 4097925 - G 91 -15.2 -3.02144 | opp_overlap 4097955 CCAGGTGGCGTAATA GCCGCCCAGCGACG ATCCGA CGACGCCGAGCGGC GCTCCACCGTGTTCA CKO_04424 4098967 - 4098140 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase CKO_04425 4099414 - 4098992 - | hypothetical protein TERM 5246 4099081 - 4099091 + g 95 -5.4 -5.30616 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTTGGATAA CKO_04426 4100019 - 4099411 - | ADP-ribose pyrophosphatase NudF TERM 5247 4100171 - 4100195 + H 72 -5.7 -4.45259 | opp_overlap 4100155, overlap 4100173 GCCAACTTTTTGCAG TGGCGGATTCT GCT AGAATCAGCAA TTATTTTTACAATTT CKO_04427 4100243 - 4101712 + | outer membrane channel protein CKO_04428 4101811 - 4101665 - | hypothetical protein TERM 5248 4102095 - 4102074 - g 91 -11.5 -4.25104 | TTCGCTGTATCAAAA CGCCGACGA CTGC TCGGCGGCG AACCCGGGCAAAAAC TERM 5249 4102390 - 4102377 - g 77 -3.7 -5.0538 | overlap 4102378 GTTCAGTTCAAAAAA CCCGG CCAG CCCGG CCTACGGTAAATACA TERM 5250 4102527 - 4102486 - g 89 -13.7 -3.53811 | opp_overlap 4102496 GCGATGGCGCCGAAA CCCGCCACAACCACAACCG TTAC CCGTGGTGGTTTTGGCGAG TCAGTGGCAAAACAA CKO_04429 4101928 - 4102596 + | hypothetical protein TERM 5251 4102960 - 4102985 + G 73 -5.4 -4.62783 | gap 1, opp_overlap 4102952, overlap 4102963 AAAATAACGCCGATA CGCCGACCTCA CTGTA TGAGGCCG-CG TTTTTCCAGTGGATC CKO_04430 4102602 - 4103762 + | hypothetical protein CKO_04431 4104588 - 4103848 - | hypothetical protein CKO_04432 4104736 - 4105551 + | zinc transporter ZupT CKO_04433 4105747 - 4105571 - | hypothetical protein TERM 5252 4105964 - 4105987 + r 100 -12.4 -5.2291 | opp_overlap 4105964 TGTAAACACAAAAAA CCGAAGCCTG CGAA CCGGCTTCGG TTTTTATTATCATCT TERM 5253 4105987 - 4105964 - R 100 -12.4 -5.56264 | opp_overlap 4105964 TGTAAACACAAAAAA CCGAAGCCTG CGAA CCGGCTTCGG TTTTTATTATCATCT CKO_04434 4106694 - 4106041 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 5254 4106414 - 4106432 + g 74 -10.2 -3.4811 | opp_overlap 4106414, overlap 4106412 ATGGTCACGGTAAAA CCGGTGCC GTA GGCGCTGG TATTGTTCTCCACCA CKO_04435 4107024 - 4107434 + | hypothetical protein TERM 5255 4107465 - 4107438 - Tf 84 -7.6 -4.87626 | opp_overlap 4107439 4107440 4107441, overlap 4107441 4107444 CCGCAAGAGTAAAAA CCACAACGGGCC GTAA GGCCCGTTGATA TTTTCAGTGTTCGAG TERM 5256 4107439 - 4107465 + TF 74 -7.3 -4.28254 | gap 1, opp_overlap 4107438 4107441 4107444, overlap 4107440 4107441 CGCAAGAGTAAAAAC CA-CAACGGGCC GTAA GGCCCGTTGATA TTTTCAGTGTTCGAG TERM 5257 4107440 - 4107463 + TF 93 -12.4 -3.741 | opp_overlap 4107438 4107441 4107444, overlap 4107439 4107441 GCAAGAGTAAAAACC ACAACGGGCC GTAA GGCCCGTTGA TATTTTCAGTGTTCG TERM 5258 4107441 - 4107462 + TF 93 -15.9 -2.83737 | opp_overlap 4107438 4107441 4107444, overlap 4107440 4107439 CAAGAGTAAAAACCA CAACGGGCC GTAA GGCCCGTTG ATATTTTCAGTGTTC TERM 5259 4107462 - 4107441 - Tf 100 -15.9 -3.32265 | opp_overlap 4107441 4107440 4107439, overlap 4107438 4107444 CAAGAGTAAAAACCA CAACGGGCC GTAA GGCCCGTTG ATATTTTCAGTGTTC TERM 5260 4107459 - 4107444 - Tf 93 -11.8 -3.77111 | opp_overlap 4107441 4107440 4107439, overlap 4107441 4107438 GAGTAAAAACCACAA CGGGCC GTAA GGCCCG TTGATATTTTCAGTG CKO_04437 4107678 - 4107469 - | glycogen synthesis protein GlgS CKO_04436 4107530 - 4107724 + | hypothetical protein TERM 5261 4107794 - 4107766 - TR 74 -5.4 -4.56775 | gap 1 ACGGTTGTGCAAAAA GTGCGCATATCAG TTGC CTGACAT-CACAC TTTGGGAACAAGCCA CKO_04438 4109286 - 4107853 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase CKO_04439 4112186 - 4109346 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 5262 4111899 - 4111937 + g 71 -10.3 -3.18582 | gap 2, opp_overlap 4111913 GATACGTACCATGAT GCGGCGACGGAATACGCGA AGC TCGCGCAT-CAG-CGCCGC TTCATCAGTCACCTG CKO_04440 4112308 - 4112183 - | hypothetical protein CKO_04441 4112495 - 4112208 - | hypothetical protein CKO_04442 4113909 - 4112509 - | hypothetical protein TERM 5263 4114446 - 4114430 - g 81 -6.5 -4.76041 | opp_overlap 4114429, overlap 4114431 GACATGCAGCAAAAA GTGTCGC AGA GCGACAG CGTGATTAACGGGTT TERM 5264 4114445 - 4114431 - g 70 -10 -3.44902 | opp_overlap 4114429, overlap 4114430 ACATGCAGCAAAAAG TGTCGC AGA GCGACA GCGTGATTAACGGGT TERM 5265 4114484 - 4114474 - g 76 -3.2 -5.00196 | GTTGAAAGAAGAAAA CCAG AAG CTGA AAAACGAGCTGATCG CKO_04443 4114052 - 4114672 + | putative signal transduction protein TERM 5266 4114843 - 4114870 + G 88 -11.2 -4.2243 | overlap 4114844 4114866 CGCAGGAGATGCTTG ACGCGGGCTACC AGCA GGTAGGCCGCGA TTTTCCCGTGTTTCT TERM 5267 4114844 - 4114869 + G 91 -14.7 -3.12373 | overlap 4114843 4114866 GCAGGAGATGCTTGA CGCGGGCTACC AGCA GGTAGGCCGCG ATTTTCCCGTGTTTC TERM 5268 4115145 - 4115155 + G 77 -8.2 -4.07885 | overlap 4115144 4115141 CCGCTGCGCGTGTTG CGCG TGG CGCG TTTTGCCGCCCGCTA TERM 5269 4115345 - 4115373 + G 70 -9.5 -3.41222 | overlap 4115322 4115339 4115343 CGACTGCGGCGCGCT GCGCGTTCTGTTC CCG GAAGTGGACGCGC TGTTTGGCGTTCCGG CKO_04444 4114737 - 4115978 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase CKO_04445 4116150 - 4115938 - | hypothetical protein CKO_04446 4116211 - 4116053 - | hypothetical protein CKO_04447 4117046 - 4116228 - | undecaprenyl pyrophosphate phosphatase CKO_04448 4117505 - 4117137 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase CKO_04449 4117612 - 4118229 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 5270 4118299 - 4118311 + T 70 -9.1 -3.30124 | opp_overlap 4118283 GCATCGCCGGATGGC GACGC AAA GCGTC TTATCCGGCCTACAG CKO_04450 4119268 - 4118333 - | transcriptional activator TtdR TERM 5271 4119426 - 4119412 - H 72 -2.8 -5.08086 | opp_overlap 4119412, overlap 4119415 ACAAAAAATATAAAA CCAC ACCTTTA GTGG TAGTTTACTCCAGAG TERM 5272 4119869 - 4119856 - g 75 -5.9 -4.62302 | overlap 4119846 4119844 4119858 4119859 GAATACCGGCAAAAA CACCG GCAG CGGCG TGCCGTGGGTCACCT CKO_04451 4119479 - 4120390 + | tartrate dehydratase subunit alpha CKO_04452 4120387 - 4120992 + | L(+)-tartrate dehydratase subunit beta TERM 5273 4120999 - 4121021 + F 100 -13.4 -4.37886 | opp_overlap 4120993 4120994, overlap 4121000 ATCAAATAACCCTCC TGGAGAGGCG CTG CGCCTCTCCC TTTTCTCAGGGATAC TERM 5274 4121000 - 4121020 + F 100 -16.9 -3.2241 | opp_overlap 4120993 4120994, overlap 4120999 TCAAATAACCCTCCT GGAGAGGCG CTG CGCCTCTCC CTTTTCTCAGGGATA TERM 5275 4121130 - 4121145 + G 70 -9 -3.70051 | overlap 4121128 CCCCACCGGTCTTGA GAGCCA CACC TGGCTC TATTTTGCGGTCTTT TERM 5276 4121210 - 4121239 + G 77 -11.5 -3.49475 | overlap 4121202 4121211 TACCGGGCGCGGTCG TGGCGATGATCGG GATT TCGATCATTGCCG TTCTGTCGCCGTGGC TERM 5277 4121211 - 4121238 + G 75 -12.8 -2.69471 | overlap 4121202 4121210 ACCGGGCGCGGTCGT GGCGATGATCGG GATT TCGATCATTGCC GTTCTGTCGCCGTGG CKO_04453 4121041 - 4122504 + | hypothetical protein TERM 5278 4122513 - 4122533 + F 91 -8.2 -5.09225 | opp_overlap 4122506 GCTGTAAACCTCGTT GGGGCGGC ATGAC GTCGCCTC TTTTTTCCATAAGCT TERM 5279 4122897 - 4122937 + G 85 -6.8 -4.96848 | gap 1, overlap 4122899 CCTGGCTCAGGGAAG TTTTACCGCAGTCGCGGCC CTCA GGC-GCAGCTGCGGCAGGA TTTTTATCTCGCCCC TERM 5280 4122980 - 4122990 + G 73 -5.4 -4.56597 | GGAGTGGCTGCCGCA GGAT ACG ATCC TTTTTCCCGGCGCGA CKO_04454 4122594 - 4123451 + | hypothetical protein TERM 5281 4123570 - 4123583 + G 74 -8.1 -3.9941 | TACCCGGAATCGGTG GCGCT GATC AGCGC TTTCATTATGGAAGG CKO_04455 4123462 - 4123764 + | urease subunit gamma CKO_04456 4123775 - 4124095 + | urease subunit beta TERM 5282 4125114 - 4125146 + G 74 -7.8 -4.1899 | opp_overlap 4125110 CGTCGGGAAACCATC GCCGCCGAAGAT-GTG CTG CACGATCT-CGGCGCC TTTTCCCTGACCTCG TERM 5283 4125391 - 4125401 + G 80 -4.6 -5.0538 | overlap 4125389 CGGATCTGGTGCTCT GGTC TCC GGCC TTTTTTGGCGTAAAA TERM 5284 4125763 - 4125775 + G 74 -3.3 -4.94109 | opp_overlap 4125747 CGGCAGACGTGTTGC CGATG GCC CAGCG TTATTTTTTATTTTG CKO_04457 4124088 - 4125791 + | urease subunit alpha CKO_04458 4125801 - 4126259 + | urease accessory protein UreE CKO_04459 4126259 - 4126933 + | hypothetical protein CKO_04460 4126943 - 4127560 + | hypothetical protein CKO_04461 4128660 - 4127647 - | O-sialoglycoprotein endopeptidase TERM 5285 4127985 - 4128014 + g 70 -6.5 -4.07568 | gap 1 TCTGTTCATCATCAC CGTT-GCTGCGGAT CGT GTTTGCAGCGAACG TTTTCAGCCCGGAGA CKO_04463 4128899 - 4128669 - | hypothetical protein TERM 5286 4128865 - 4128848 - GH 74 -8.4 -3.9281 | overlap 4128849 ACCATTTTGAAATAA GCTGGC GCTGAT GCCAGC GGCAAACCGATTTAA CKO_04462 4128898 - 4129113 + | 30S ribosomal protein S21 TERM 5287 4129158 - 4129191 + FH 82 -7.6 -4.62475 | overlap 4129162 ACCGAGTTGTAGTTG TAAGGCCGTGC-TTCC GAAA GGAATGCGCGGC-TTA TTTTCGTTTATGCAT TERM 5288 4129162 - 4129188 + FH 95 -10.9 -4.40882 | gap 1, overlap 4129158 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG TERM 5289 4129256 - 4129223 - gfH 71 -4.5 -4.64844 | gap 1, overlap 4129226 GGCATATATACAAAA TCATTCAGGATGCGGC AAA GCGGCG-CCTGAAAGA TGAAGTGTATAAAAG CKO_04464 4129165 - 4129344 + | hypothetical protein TERM 5290 4130358 - 4130387 + GF 74 -7.1 -4.21607 | gap 1, opp_overlap 4130347 4130358, overlap 4130364 GAAGCATTCGAAGCA CGGATGGAGCAGGC TCT GCC-GCTCTCTCTG TTTCTCTTCAATAGC CKO_04465 4129278 - 4131023 + | DNA primase CKO_04466 4131254 - 4133098 + | RNA polymerase sigma factor RpoD TERM 5291 4133136 - 4133119 - T 85 -12.7 -3.30474 | opp_overlap 4133119 CCGCATAAGCATCAA CGCCACC GCAA GGTGGCG TTTTTTTACCGCTTA TERM 5292 4133119 - 4133136 + T 100 -12.7 -5.43866 | opp_overlap 4133119 CCGCATAAGCATCAA CGCCACC GCAA GGTGGCG TTTTTTTACCGCTTA CKO_04467 4133655 - 4133149 - | G/U mismatch-specific DNA glycosylase TERM 5293 4133865 - 4133888 + r 100 -13.2 -5.81412 | opp_overlap 4133859 4133865 GCCACCAAATATCAA GGACTTGCGA GAAA TCGCAGGTCC TTTTTTTTGGGTGGC TERM 5294 4133888 - 4133865 - R 82 -11 -3.48269 | opp_overlap 4133865, overlap 4133859 GCCACCAAATATCAA GGACTTGCGA GAAA TCGCAGGTCC TTTTTTTTGGGTGGC CKO_04469 4134295 - 4133972 - | hypothetical protein CKO_04470 4134837 - 4134694 - | hypothetical protein TERM 5295 4134740 - 4134730 - GR 72 -2.6 -4.86029 | overlap 4134738 ATAAAGAACACAAAA TAAA ACA TTTA CCACCGCGCGATAAT CKO_04471 4134997 - 4134767 - | hypothetical protein CKO_04472 4136938 - 4135013 - | DNA-binding transcriptional regulator DhaR TERM 5296 4136447 - 4136425 - G 91 -12 -4.17701 | overlap 4136418 GCGATAAATCAGAAA CTGACTGGTG CTC CACCAGACAG CAGAGCGAAATGGAG TERM 5297 4136994 - 4136968 - R 100 -15.8 -3.61902 | TTTTACCATAGACAA CCCCTCCGGCCG GAA CGGTCAGAGGGG AGGAGAAACTGCCTG CKO_04473 4138150 - 4137044 - | hypothetical protein CKO_04475 4138323 - 4138171 - | hypothetical protein CKO_04476 4138399 - 4138211 - | hypothetical protein CKO_04478 4138605 - 4138327 - | hypothetical protein CKO_04474 4138175 - 4138489 + | hypothetical protein TERM 5298 4138593 - 4138546 - Gg 79 -7.2 -4.46212 | opp_overlap 4138545 4138544 4138547, overlap 4138547 TTTTTCATCAGAAAA CGTTTCATTACGGAACGTAA AAGAATAA TTTCGTTTCGTAATGAAACT CCTTTTCTTCAAATT TERM 5299 4138547 - 4138592 + Gg 83 -12.9 -3.2594 | opp_overlap 4138546 4138547, overlap 4138545 4138544 TTTTCATCAGAAAAC GTTTCATTACGGAACGTAA AAGAATAA TTTCGTTTCGTAATGAAAC TCCTTTTCTTCAAAT TERM 5300 4138592 - 4138547 - Gg 71 -10.7 -3.27406 | opp_overlap 4138547 4138545 4138544, overlap 4138546 TTTTCATCAGAAAAC GTTTCATTACGGAACGTAA AAGAATAA TTTCGTTTCGTAATGAAAC TCCTTTTCTTCAAAT CKO_04477 4138486 - 4138671 + | hypothetical protein TERM 5301 4139199 - 4139176 - g 76 -9.5 -3.88232 | overlap 4139179 GCTGCCAGACAATAA GCACCCGCG CGGTAT CGCGGGCAC CATTCTGGTTCATAA TERM 5302 4139452 - 4139431 - g 74 -6.6 -4.24204 | gap 1, overlap 4139433 CATTGATACCCAAAA CAGCGCGCA GATTG TGCGC-CTG ATGGCCGACAAACTC CKO_04479 4138736 - 4140394 + | hypothetical protein TERM 5303 4140428 - 4140409 - T 100 -12.1 -4.48072 | ATAGTCAGCAGAAAA CCGGGCC CGCAGT GGCCCGG TTAAACTTCCACCTG CKO_04480 4141359 - 4140454 - | hypothetical protein TERM 5304 4141200 - 4141181 - G 81 -8.6 -4.28361 | gap 1, overlap 4141197 GTAAGTTCACGAAAA CGCAGTTCG TTA CGAAC-GCG CTGTGGGTAGCGTGA CKO_04482 4141586 - 4141377 - | hypothetical protein TERM 5305 4141549 - 4141574 + Gg 100 -18.3 -5.00616 | opp_overlap 4141500 ACCGTCATGGCCGGG GCGCTGGCGGC GGAC GTCGCCAGCGC TTTTTTGGCCACGGC CKO_04481 4141483 - 4141605 + | hypothetical protein CKO_04483 4141602 - 4142030 + | hypothetical protein CKO_04484 4143592 - 4142027 - | hypothetical protein TERM 5306 4143869 - 4143890 + r 95 -13.1 -3.85817 | opp_overlap 4143869 AATATTATGACAAAA CGCTTATCG GCTT CGATAAGCG TTTGTCGGCAGAAAT TERM 5307 4143890 - 4143869 - R 100 -13.1 -4.50583 | opp_overlap 4143869 AATATTATGACAAAA CGCTTATCG GCTT CGATAAGCG TTTGTCGGCAGAAAT CKO_04485 4145440 - 4143920 - | hypothetical protein TERM 5308 4144408 - 4144422 + g 71 -5.7 -4.27192 | GCTGCGTGCTGTCAG CGATG TCATC CATCG TTTTAATGACGGTTT TERM 5309 4146276 - 4146266 - g 70 -6.8 -4.1899 | overlap 4146267 CCATGCTAGCTAAAA CGCT CGC AGCG CTCACGCCTGGAAAA CKO_04486 4145740 - 4147251 + | putrescine--2-oxoglutarate aminotransferase TERM 5310 4148623 - 4148601 - g 100 -11.3 -4.90381 | gap 1, opp_overlap 4148615 4148616 CTGAACATAAGAAAA GCCTG-GCCG TCGT CGGCGCAGGC CCGGCGGGTCTCGCA CKO_04487 4147475 - 4149493 + | hypothetical protein CKO_04488 4150721 - 4149585 - | hypothetical protein CKO_04489 4150808 - 4151311 + | hypothetical protein CKO_04490 4151381 - 4152367 + | hypothetical protein TERM 5311 4152384 - 4152420 + F 74 -6 -4.67982 | gap 1, opp_overlap 4152384 4152389, overlap 4152386 4152389 ACAATGTAAAACAGA TGTAACAGGCCAT-TGA CTGA TCGTATGGCCTGTCATA TTTTGTTACGTGCAA TERM 5312 4152642 - 4152667 + F 100 -13.3 -6.06529 | opp_overlap 4152641 4152639 4152642 GCATATAAAAAGCAG CGGCTGACGTC TTTC GACGTTGGCCG TTTTTTTTATGTGTA CKO_04491 4152693 - 4153661 + | hypothetical protein TERM 5313 4153656 - 4153646 - f 72 -3.2 -5.01535 | CCAGAACGATAAAAA GCAG CAG CTAC AGTAAGACCCTGCCC TERM 5314 4153696 - 4153665 - f 70 -10.8 -2.52023 | opp_overlap 4153671, overlap 4153662 4153664 CAGCTACAGTAAGAC CCTGCCCGGCAG CGCCATGT CTGCCGGGCTGA CAAAAACCACGGTCG TERM 5315 4153714 - 4153703 - f 78 -5.8 -4.82901 | opp_overlap 4153702 CCGGGCTGACAAAAA CCAC GGTC GTGG GTTGAGTACACGCAG TERM 5316 4154687 - 4154698 + G 71 -7.2 -3.92542 | opp_overlap 4154685 TGCCTGCGTGAAAGC GGCG TGAC CGCC TTCTTTACCCGTAGC CKO_04492 4153916 - 4155160 + | serine/threonine transporter SstT CKO_04493 4156917 - 4155430 - | hypothetical protein CKO_04494 4158407 - 4156932 - | glucuronate isomerase TERM 5317 4157869 - 4157887 + g 76 -5.2 -4.76892 | opp_overlap 4157869, overlap 4157871 AGCGAATCGACAGGA TCGTCGGT GGT GCCGACCA TTTTTACATTCATCT TERM 5318 4158712 - 4158722 + H 79 -2.4 -5.55698 | CATGGCAACGTTCGG GGCG TAC CGGC TTTTTTTCGGTTATC TERM 5319 4160078 - 4160062 - g 73 -5 -4.64861 | overlap 4160064 GTGCTGCAAAACAAA CCGGCC AGCGA GGCGGG GCCAGGGTCGCAGGT CKO_04495 4158805 - 4160118 + | hypothetical protein TERM 5320 4160180 - 4160160 - f 100 -16.9 -3.6682 | opp_overlap 4160160 GTTTACTCATTCAAA GCCGCCTGT TAA ACAGGCGGC TTTTTCAACGGTACA TERM 5321 4160160 - 4160180 + F 100 -16.9 -4.58395 | opp_overlap 4160160 GTTTACTCATTCAAA GCCGCCTGT TAA ACAGGCGGC TTTTTCAACGGTACA CKO_04496 4160261 - 4161037 + | DNA-binding transcriptional repressor ExuR CKO_04497 4161387 - 4162049 + | hypothetical protein TERM 5322 4162281 - 4162255 - g 74 -7.2 -4.08216 | opp_overlap 4162255 GCATTCGCTTCAAAA GCATCACGCCAC AAA ATGACGCGCTGC TCATTACGTTTGACT CKO_04498 4162053 - 4162436 + | hypothetical protein TERM 5323 4162521 - 4162503 - f 93 -11.7 -3.75738 | opp_overlap 4162502 4162500 4162503 GACTATGATTAATAA GGCGGAC TTATT GTCCGCC GTGTTATGACCTGGA TERM 5324 4162503 - 4162521 + F 76 -11.7 -2.53822 | opp_overlap 4162503, overlap 4162502 4162500 GACTATGATTAATAA GGCGGAC TTATT GTCCGCC GTGTTATGACCTGGA CKO_04499 4162584 - 4162952 + | hypothetical protein CKO_04500 4162994 - 4163299 + | hypothetical protein CKO_04501 4163302 - 4163700 + | hypothetical protein CKO_04502 4163697 - 4163996 + | hypothetical protein TERM 5325 4163995 - 4163979 - f 73 -7.9 -4.15833 | opp_overlap 4163978 4163981 4163989 AGCACGATCCGAAAA CAGCAGC TGC GCGGCTG ATTCCTGCCCCCTTC TERM 5326 4164593 - 4164579 - g 70 -2.8 -4.72986 | overlap 4164580 4164581 GATGTTCATGAAAAA CCTG ACCATCG CAGG CGGTTTCCTGCTGCT CKO_04503 4164274 - 4164666 + | hypothetical protein TERM 5327 4164708 - 4164690 - f 100 -8.8 -5.28481 | opp_overlap 4164690 TACTGAATCAAAAAA CGAGGGGA TAT TCTCCTCG TTTTTGCTATCTGGA TERM 5328 4164690 - 4164708 + F 100 -11 -4.84527 | opp_overlap 4164690 TACTGAATCAAAAAA CGAGGGGA TAT TCTCCTCG TTTTTGCTATCTGGA CKO_04504 4164735 - 4165730 + | hypothetical protein CKO_04505 4165889 - 4166254 + | hypothetical protein CKO_04506 4167240 - 4166344 - | hypothetical protein TERM 5329 4167859 - 4167849 - g 74 -2.4 -5.05782 | ATTGAGCTGAAAAAA GGCG AGT CGCT GAGCTTTCAACTGCA CKO_04507 4167345 - 4168046 + | hypothetical protein CKO_04509 4168350 - 4168156 - | hypothetical protein CKO_04508 4168067 - 4168237 + | hypothetical protein TERM 5330 4168250 - 4168225 - GT 88 -13.3 -3.40611 | opp_overlap 4168226 4168229, overlap 4168223 4168226 4168229 GTTAGCGGAAGAAGA TGAAGCCGCCT GAAA AGGCGGCTTCT GATTACCGATAAACG TERM 5331 4168249 - 4168226 - GT 95 -16.8 -2.64045 | opp_overlap 4168226 4168229, overlap 4168225 4168223 4168229 TTAGCGGAAGAAGAT GAAGCCGCCT GAAA AGGCGGCTTC TGATTACCGATAAAC TERM 5332 4168226 - 4168249 + gT 95 -16.8 -2.72344 | opp_overlap 4168226 4168225 4168223 4168229, overlap 4168229 TTAGCGGAAGAAGAT GAAGCCGCCT GAAA AGGCGGCTTC TGATTACCGATAAAC TERM 5333 4168246 - 4168229 - GT 85 -12.7 -3.46509 | opp_overlap 4168226 4168229, overlap 4168226 4168225 4168223 GCGGAAGAAGATGAA GCCGCCT GAAA AGGCGGC TTCTGATTACCGATA TERM 5334 4168229 - 4168246 + gT 88 -12.7 -3.51329 | opp_overlap 4168229 4168226 4168225 4168223, overlap 4168226 GCGGAAGAAGATGAA GCCGCCT GAAA AGGCGGC TTCTGATTACCGATA CKO_04510 4169676 - 4168366 - | hypothetical protein TERM 5335 4169368 - 4169383 + g 75 -6 -4.59853 | opp_overlap 4169380 TTTCGCATCCGCAAT CGCCCC CGAA GAGGCG TTTTTCAACACTTCC CKO_04511 4171087 - 4169702 - | hypothetical protein TERM 5336 4170249 - 4170259 + g 71 -8.2 -3.89346 | opp_overlap 4170230 AACGCGATATTCATG GCGC GCA GCGC TTTATGCCGTGCGAC TERM 5337 4171290 - 4171273 - R 100 -11.3 -5.58179 | opp_overlap 4171273 GATCACAACAAAAAA GGTGCAC TAAA GTGCACC TTTTTATCATGCCAT TERM 5338 4171273 - 4171290 + r 100 -11.3 -4.91511 | opp_overlap 4171273 GATCACAACAAAAAA GGTGCAC TAAA GTGCACC TTTTTATCATGCCAT CKO_04512 4172778 - 4171414 - | hypothetical protein CKO_04513 4173274 - 4172879 - | hypothetical protein CKO_04514 4175582 - 4173288 - | hypothetical protein TERM 5339 4175260 - 4175281 + g 77 -3.7 -5.03715 | overlap 4175262 GCGCGCTTGAGTGGC TTATCGGTT TGCA AACCGACGA TTTTTTCCAGCTCCT CKO_04515 4176733 - 4175615 - | propionate/acetate kinase TERM 5340 4176652 - 4176676 + g 85 -15.7 -2.64803 | overlap 4176649 4176657 CGCCTTCGTAGCTGT GGTGAGCCAGC TTA GCTGGCTCTCC TCCATTTACGGATAA CKO_04516 4178186 - 4176855 - | threonine/serine transporter TdcC CKO_04517 4179210 - 4178221 - | threonine dehydratase CKO_04518 4180252 - 4179314 - | DNA-binding transcriptional activator TdcA TERM 5341 4180339 - 4180361 + r 70 -2 -5.02074 | opp_overlap 4180339 4180342, overlap 4180342 4180343 TACTCACAAATTAAC TTACCTTACA TTT TGTAAGCTTA TTTTTTAAAAAATAA TERM 5342 4180384 - 4180374 - R 72 -2.6 -5.02074 | opp_overlap 4180374, overlap 4180382 TTATTTTTTAAAAAA TAAA TCA TTTA TTATCAATAAGTTAA TERM 5343 4180620 - 4180633 + r 86 -3.1 -5.70522 | opp_overlap 4180620 ATTGGGATTAAAGAT TGTGG CATA TCACA TTTTTTCTTCTTATT CKO_04519 4181142 - 4180795 - | hypothetical protein TERM 5344 4181222 - 4181195 - R 100 -15 -3.7795 | opp_overlap 4181202, overlap 4181202 CCAAACGCTATGAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC ATGAAGAGGTGAAAC TERM 5345 4181202 - 4181215 + r 93 -9.5 -4.65895 | opp_overlap 4181202 4181195 CTATGAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACATGAAGAG TERM 5346 4181215 - 4181202 - R 100 -9.5 -5.01811 | opp_overlap 4181202, overlap 4181195 CTATGAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACATGAAGAG CKO_04521 4182785 - 4181640 - | glycerate kinase I CKO_04522 4183772 - 4182882 - | tartronate semialdehyde reductase TERM 5347 4183442 - 4183456 + g 71 -10 -3.57561 | CGATACCTTTTGCTT TCAGCG CAT CGCTGA TTTCACGGCTTGCCA CKO_04523 4184574 - 4183801 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase TERM 5348 4184520 - 4184538 + g 85 -11 -3.93262 | AGCCGATCTGAATGC GTTGCGCT GCC AGCGCAGC TTTAAATTTGTTCGG CKO_04525 4184733 - 4184575 - | hypothetical protein CKO_04526 4184898 - 4184743 - | hypothetical protein CKO_04524 4184718 - 4184864 + | hypothetical protein CKO_04528 4185037 - 4184906 - | hypothetical protein CKO_04527 4184981 - 4186552 + | hypothetical protein TERM 5349 4186563 - 4186593 + Tr 100 -19.8 -4.11692 | opp_overlap 4186563 CCTGATGACGAAAAA GGCCGGATGGGGAT CGC ATCACCATCCGGCC TTTTACAGATAACTG TERM 5350 4186593 - 4186563 - TR 100 -19.8 -4.77036 | opp_overlap 4186563 CCTGATGACGAAAAA GGCCGGATGGGGAT CGC ATCACCATCCGGCC TTTTACAGATAACTG CKO_04529 4187420 - 4186611 - | DNA-binding transcriptional regulator AgaR TERM 5351 4186966 - 4186926 - G 73 -6.3 -4.46212 | gap 3, overlap 4186929 CTGGTCACCATAAAA TGACTG-CGACTGGCGGCGC AGAT GC-CCACCAGTCATCAG-CA GTTCCACTCCCTCAG TERM 5352 4187093 - 4187105 + g 76 -10.5 -3.72576 | opp_overlap 4187087 4187090 CTGAGTCAAGGATCA CCCGG TGT CCGGG TTTAATCAGCGAAAC CKO_04530 4187688 - 4188965 + | hypothetical protein CKO_04531 4188984 - 4189457 + | N-acetylgalactosamine-specific PTS system transporter subunit IIB CKO_04532 4189468 - 4190247 + | hypothetical protein CKO_04533 4190237 - 4191115 + | hypothetical protein TERM 5353 4191337 - 4191347 + G 77 -8.2 -4.14243 | CTGACTGACCTGTTG GGCG GTA CGCC TTTTCGGGTGGCATC CKO_04534 4191133 - 4191567 + | hypothetical protein CKO_04535 4191564 - 4192697 + | hypothetical protein TERM 5354 4192720 - 4192745 + F 100 -10.5 -5.12987 | gap 1 ATTCTCTGTCATATT GGCCTTA-GACG TAA CGTCATGAGGCC TTTCTTTTTCTTTCG TERM 5355 4193968 - 4193982 + G 72 -3.5 -4.71426 | gap 1 CCCACATATCCTGCT GC-CGC CATC GCGCGC TTTTATTGATACAGA CKO_04536 4192997 - 4194142 + | hypothetical protein CKO_04537 4194155 - 4195027 + | tagatose-bisphosphate aldolase TERM 5356 4195111 - 4195088 - f 71 -6.8 -4.19238 | opp_overlap 4195088 TTCGCAATTTCAAAA GGTCATGA TTAATTCC TCATGACC TTCATATTATACTGA TERM 5357 4196637 - 4196618 - g 90 -4.8 -5.34055 | opp_overlap 4196618 ACAAACATTAAAAAA CGCCGGGG CGCT CTCCGTCG TTGTACTGGATGCGC CKO_04538 4195149 - 4196720 + | hypothetical protein TERM 5358 4197499 - 4197511 + G 80 -9.1 -4.07687 | opp_overlap 4197499 TCATCCCGAATGAGA CGCTG AGG CAGCG TTTTCGCCAGCAGCT CKO_04539 4196733 - 4197905 + | hypothetical protein TERM 5359 4197918 - 4197944 + T 95 -11.7 -4.24948 | opp_overlap 4197906 4197918, overlap 4197909 4197907 TAATCCCTGTAAAAA CAGTGTTATCC CCACC GGGTAACACTG TTTTCCCTCTGATGC TERM 5360 4197944 - 4197918 - T 93 -10.3 -4.58283 | gap 1, opp_overlap 4197909 4197907 4197918, overlap 4197906 TAATCCCTGTAAAAA CAGTGTTATCCC CACC GGG-TAACACTG TTTTCCCTCTGATGC CKO_04540 4198865 - 4198002 - | hypothetical protein TERM 5361 4198923 - 4198912 - H 72 -3 -5.02074 | overlap 4198915 GCATTGCGTAAAAAA TATC ACTG GATA CAGTATGGTACCCTC TERM 5362 4200300 - 4200318 + G 76 -10.2 -3.6502 | CACGCAGCGGGCTGG GCGATCGC GTG GCGAACGC TTTCGCTCAGGAGTG TERM 5363 4200652 - 4200621 - g 70 -8.7 -3.66874 | gap 1 GTAACGGCAGCCAAA GCGGCGCAACGCTG TACGC CAGC-TCGCGCAGC GCGCAGGGCACTTCC CKO_04541 4198928 - 4200973 + | hypothetical protein TERM 5364 4201203 - 4201235 + G 71 -6.3 -4.33274 | gap 1, overlap 4201205 CAAATTATTACAGAC CGCCCGCTTGTGGC TTGCTC GCCACAA-TGGGAG TTTTGATACTGTGGA CKO_04542 4200994 - 4201326 + | hypothetical protein CKO_04543 4201347 - 4201937 + | DnaA initiator-associating protein DiaA CKO_04544 4201947 - 4202522 + | hypothetical protein CKO_04545 4203656 - 4202619 - | hypothetical protein CKO_04546 4203693 - 4203839 + | hypothetical protein CKO_04547 4204506 - 4203847 - | hypothetical protein CKO_04548 4204955 - 4204515 - | hypothetical protein TERM 5365 4204792 - 4204804 + g 81 -6.9 -4.68724 | overlap 4204793 CGCGGGCCGGACATC TGCGC ATG GCGCG TTTTCTCTTCCGTGA TERM 5366 4204843 - 4204830 - G 78 -6.7 -4.57353 | CGTGAGTACATAAAA CGCAA CCTT TTGCG CATCAAACAGATAAA TERM 5367 4204871 - 4204860 - G 72 -3.6 -4.74917 | ATCAAACAGATAAAA CGCG TTTG CGCA CCAGAGTTCGCCCTC CKO_04549 4204999 - 4205310 + | GIY-YIG nuclease superfamily protein CKO_04551 4205800 - 4205297 - | hypothetical protein CKO_04552 4206270 - 4205794 - | hypothetical protein CKO_04550 4205528 - 4206076 + | hypothetical protein CKO_04553 4206539 - 4207534 + | hypothetical protein TERM 5368 4208355 - 4208337 - g 93 -10.2 -4.4078 | opp_overlap 4208347 CCGCGCCAATGAAAA CGGCAGCG CGC CGTTGCCG CTGGCCGCGCACAGC CKO_04554 4207525 - 4208421 + | hypothetical protein CKO_04556 4208614 - 4208462 - | hypothetical protein TERM 5369 4208546 - 4208504 - Gg 80 -10.7 -3.86346 | opp_overlap 4208496 4208533, overlap 4208505 4208543 GGATGGCGGCATAAA TGCCTTATCCGGCCTACAA TGCAT TTGTAGGCCTGATAAGCGA AGCGCCATCAGGCAG TERM 5370 4208544 - 4208505 - Gg 79 -13.1 -2.91593 | gap 1, opp_overlap 4208496 4208533, overlap 4208504 4208543 GATGGCGGCATAAAT GCCTTATCCGGCCTACAA TGCAT TTGTAGGCCTGATAAG-C GAAGCGCCATCAGGC CKO_04555 4208448 - 4208621 + | hypothetical protein CKO_04557 4208662 - 4209669 + | hypothetical protein CKO_04558 4211004 - 4209760 - | tryptophan permease TERM 5371 4211114 - 4211092 - R 100 -10.6 -6.11392 | opp_overlap 4211092 4211090 4211088 4211086 AAAGAAATAAAAAAA GCCCCGAT CGCAATC ATCGGGGC TGTATATTTTACTTT TERM 5372 4211092 - 4211114 + r 77 -10.6 -3.31476 | opp_overlap 4211092, overlap 4211090 4211088 4211086 AAAGAAATAAAAAAA GCCCCGAT CGCAATC ATCGGGGC TGTATATTTTACTTT CKO_04559 4213107 - 4211158 - | ATP-dependent RNA helicase DeaD TERM 5373 4213201 - 4213176 - RH 73 -7.5 -4.04023 | overlap 4213173 4213177 ATTAACGAACAACAA CGCCCTCACCC GTGA AGGTGATGGCA ATCAAAAAGATTACG CKO_04561 4214119 - 4213235 - | lipoprotein NlpI TERM 5374 4213550 - 4213570 + gH 79 -10.5 -3.64609 | overlap 4213553 TTTATCCGATTTCTC GAAGCGTTG CTT TAACGCTTC TTTCGCCTGCTTCTC TERM 5375 4214218 - 4214195 - gR 93 -13.8 -3.53012 | opp_overlap 4214187, overlap 4214196 TCCTGCCGGGTCAAA GGCCCTCCGC CAAA GCGGAGGGCA AATGGCAACCTTACT TERM 5376 4214217 - 4214196 - gR 100 -17.3 -2.71712 | opp_overlap 4214187, overlap 4214195 CCTGCCGGGTCAAAG GCCCTCCGC CAAA GCGGAGGGC AAATGGCAACCTTAC CKO_04562 4216397 - 4214229 - | polynucleotide phosphorylase/polyadenylase TERM 5377 4215514 - 4215542 + Gg 76 -10.3 -3.74693 | TCCAGGGTTTCGTCT TCTGCAACCAGCG CAG CGATGGTTTCAGA TTTGATCACGTCAAC CKO_04560 4214058 - 4216382 + | hypothetical protein TERM 5378 4216588 - 4216572 - TR 100 -10.8 -5.00616 | opp_overlap 4216571 4216569 4216572 GTCTGGTTGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC TERM 5379 4216572 - 4216588 + Tr 71 -10.8 -2.71422 | opp_overlap 4216572, overlap 4216571 4216569 GTCTGGTTGAAAAAA GGGGCC ATGAA GGCCCC CTCTTTCTGAAACTC CKO_04564 4216880 - 4216611 - | 30S ribosomal protein S15 TERM 5380 4216715 - 4216736 + g 84 -2.9 -5.34555 | opp_overlap 4216717, overlap 4216717 4216718 AAACCATGCGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTGTGCTCTGC TERM 5381 4216983 - 4216969 - R 72 -2.8 -5.03145 | GAACTTGTTAAAAAA TTTACG TGA CGTTAA GCGGCGGTATTCTAC CKO_04565 4217977 - 4217033 - | tRNA pseudouridine synthase B TERM 5382 4217247 - 4217222 - G 72 -11.9 -2.65448 | overlap 4217221 4217212 AGGAAGATTGACAAC TGGATAGTCCG AAGC CGGACTGTCCA TCGGCATCAGCAGCG CKO_04566 4218378 - 4217977 - | ribosome-binding factor A CKO_04567 4218532 - 4218296 - | hypothetical protein TERM 5383 4218408 - 4218422 + grH 90 -8.5 -4.82855 | opp_overlap 4218408 AATAAAGACAAAAAA GGGGC CAAAA GCCCC TTTTTAAATTTCATG TERM 5384 4218422 - 4218408 - GRH 100 -9.2 -5.61913 | opp_overlap 4218408 AATAAAGACAAAAAA GGGGCC AAA AGCCCC TTTTTAAATTTCATG CKO_04569 4221283 - 4218599 - | translation initiation factor IF-2 TERM 5385 4219720 - 4219736 + gH 78 -6.5 -4.57569 | CTTCCGGCAGGATGC CGTACTG GGA CAGTTCG TTTTTAACACGATCC TERM 5386 4220871 - 4220887 + gH 74 -2.2 -5.07486 | gap 1 CGTTTAGCTTGTTCT GC-GGCC TCAC GGTCAGC TTTTTGTTGCGCCTC CKO_04570 4222795 - 4221308 - | transcription elongation factor NusA CKO_04568 4221164 - 4222609 + | hypothetical protein CKO_04571 4223246 - 4222824 - | hypothetical protein TERM 5387 4223313 - 4223301 - H 93 -6.9 -5.80248 | opp_overlap 4223300 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 5388 4223357 - 4223342 - H 100 -10.4 -5.60689 | opp_overlap 4223341 4223342 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA TERM 5389 4223342 - 4223357 + H 72 -10.4 -2.79878 | opp_overlap 4223342, overlap 4223341 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTAGATAACTGAA TERM 5390 4223863 - 4223851 - gH 74 -3.3 -4.83615 | TATTTTGCATAAAAA TGCAC TGA GAGCA GAAAGCCGATCTCTT CKO_04573 4223840 - 4224055 + | hypothetical protein CKO_04574 4223907 - 4225250 + | argininosuccinate synthase TERM 5391 4225286 - 4225271 - T 95 -11.8 -3.86944 | opp_overlap 4225271 CGGACAACGATTAAA GGCCGC GTAA GCGGCC TTTTTTGTGGGCGGT TERM 5392 4225271 - 4225286 + T 100 -11.8 -5.24531 | opp_overlap 4225271 CGGACAACGATTAAA GGCCGC GTAA GCGGCC TTTTTTGTGGGCGGT TERM 5393 4225425 - 4225440 + T 86 -9 -4.43208 | opp_overlap 4225425 GCAGACGAAAAAAAA GACGCT TTTC AGCGTC TTTCTTTCGGAATAT TERM 5394 4225440 - 4225425 - T 100 -9 -5.90981 | opp_overlap 4225425 GCAGACGAAAAAAAA GACGCT TTTC AGCGTC TTTCTTTCGGAATAT CKO_04576 4225884 - 4225552 - | preprotein translocase subunit SecG TERM 5395 4225594 - 4225607 + g 71 -4.5 -4.56597 | overlap 4225576 4225593 TGCCGGTGCAACTGG CTGAG TCTG CTCGG TTTTTGCCGGAGCGC TERM 5396 4226063 - 4226042 - R 83 -4.5 -5.41746 | AACTGCGGAAAAAAA CAGCAAAAA GGTC TTTTTCCTG CAACAAAAAGGCAGC TERM 5397 4226088 - 4226073 - R 91 -8.2 -5.06414 | opp_overlap 4226067 4226073 TTCCTGCAACAAAAA GGCAGC AAAC GCCGCC TTTTTAGTCACTTAT TERM 5398 4226073 - 4226088 + r 78 -6 -4.77759 | opp_overlap 4226073, overlap 4226067 TTCCTGCAACAAAAA GGCAGC AAAC GCCGCC TTTTTAGTCACTTAT CKO_04577 4227449 - 4226112 - | phosphoglucosamine mutase CKO_04578 4228290 - 4227442 - | dihydropteroate synthase TERM 5399 4228346 - 4228327 - R 100 -9.2 -5.56264 | opp_overlap 4228327 TTCAAATATAAAAAA CCCCGGAG CAAG CCCCAGGG TTTCGGTGAAGCAGA CKO_04579 4230315 - 4228381 - | ATP-dependent metalloprotease CKO_04580 4231044 - 4230415 - | 23S rRNA methyltransferase J TERM 5400 4230472 - 4230445 - G 74 -11.3 -3.17146 | overlap 4230443 4230441 4230447 GGTCGCTACAATATA CACTTCGCGTG AACGCG CACGCGAAGAG TCCGGCTTACGAACT TERM 5401 4230470 - 4230447 - G 81 -12.5 -3.14745 | overlap 4230445 4230443 4230441 TCGCTACAATATACA CTTCGCGTG AACGCG CACGCGAAG AGTCCGGCTTACGAA TERM 5402 4231212 - 4231195 - g 90 -4.9 -5.34309 | gap 1, overlap 4231200 AGTACTAAACAAAAA CAGCACCT GAA AGGT-CTG GCACATCCGCTCAAG CKO_04581 4231114 - 4231464 + | RNA-binding protein YhbY TERM 5403 4231550 - 4231577 + T 86 -13.6 -3.25946 | gap 1, opp_overlap 4231557, overlap 4231557 CACGCTCTCTTCGTT GATAAAAGGCCGC ATA GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 5404 4231557 - 4231571 + T 100 -12.8 -5.13137 | opp_overlap 4231557, overlap 4231550 TCTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA TERM 5405 4231571 - 4231557 - T 95 -12.8 -4.36914 | opp_overlap 4231557 4231550 TCTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA CKO_04582 4232096 - 4231620 - | transcription elongation factor GreA TERM 5406 4231658 - 4231669 + g 77 -7.2 -4.30576 | CTTCGTATTCCACTT CGCC GCCA GGCG TTTTGATGGTCACGA TERM 5407 4232229 - 4232197 - H 89 -4.2 -5.68023 | overlap 4232199 CCAGAAGCAAAAAAA TA-CCGACCCGGGTAC AAA GC-CCCAGGTCAGCTA CAATTCTCAATTTGA TERM 5408 4232226 - 4232199 - H 81 -8.4 -4.46828 | gap 1, overlap 4232197 AGAAGCAAAAAAATA CCGACCCGGGTAC AAA GC-CCCAGGTCAG CTACAATTCTCAATT TERM 5409 4233153 - 4233139 - g 71 -6.4 -4.22883 | GACGAGTTAAAACAA GCAGGT ATT ACCTAC AGCGGTACGCTGTTA TERM 5410 4233278 - 4233259 - g 77 -3.6 -5.03715 | gap 1 ATTATGCTGAAAAAA TCGGACAAC ATG ATTG-CCGA TACCGTCTTTCGCAT CKO_04583 4232344 - 4233777 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase CKO_04585 4233908 - 4233816 - | hypothetical protein TERM 5411 4233841 - 4233874 + Gg 72 -11.7 -2.64616 | gap 1, opp_overlap 4233840, overlap 4233841 4233852 GATGGGTCATTTAAT TGCCGGATGGCGGCGC TTT GCGCC-TTATCCGGCC TACTATCCGTAGGCC TERM 5412 4233852 - 4233864 + Gg 71 -10.5 -3.30441 | opp_overlap 4233840, overlap 4233841 4233841 TAATTGCCGGATGGC GGCGC TTT GCGCC TTATCCGGCCTACTA CKO_04584 4233787 - 4233942 + | hypothetical protein CKO_04587 4235098 - 4233926 - | GTPase ObgE TERM 5413 4234197 - 4234210 + gFH 77 -3.8 -5.10208 | CAGCCCAGCGCCTGC GCGA TAGCTT TCGC TTTTTCTTCCGCTTC CKO_04588 4236079 - 4235114 - | hypothetical protein CKO_04586 4235046 - 4235180 + | hypothetical protein TERM 5414 4235614 - 4235594 - GT 79 -10.5 -3.61178 | CGCACCGACCCCAAA GATCACACC CCA GGTGTAATC GGTCAGTTTGGTAAA TERM 5415 4236147 - 4236126 - TR 100 -15.9 -4.74103 | opp_overlap 4236126 TTTTCAATGTAAAAA GCCCCGCAA CACG TTGCGGGGC TTTAATCCGTTACCG TERM 5416 4236126 - 4236147 + Tr 100 -15.9 -3.794 | opp_overlap 4236126 TTTTCAATGTAAAAA GCCCCGCAA CACG TTGCGGGGC TTTAATCCGTTACCG CKO_04589 4236433 - 4236176 - | 50S ribosomal protein L27 CKO_04590 4236498 - 4237994 + | hypothetical protein TERM 5417 4238004 - 4238030 + F 86 -13 -3.46336 | overlap 4238002 4238005 CGTTAACCCTCCCTT CTCATCCCGTGC TCT GCGCGGGATGAA TCTTTAAGTTCCAGT TERM 5418 4238005 - 4238029 + F 95 -16.5 -2.6732 | overlap 4238004 4238002 GTTAACCCTCCCTTC TCATCCCGTGC TCT GCGCGGGATGA ATCTTTAAGTTCCAG CKO_04591 4238230 - 4238502 + | DNA-binding transcriptional regulator Nlp CKO_04592 4239833 - 4238574 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 5419 4239331 - 4239353 + g 90 -12 -3.92075 | opp_overlap 4239329 4239326 GCCGCAGACATGATG GTCACCGTCG CAC CGACGCTGAC TTTGTCCATCACGAT CKO_04593 4240180 - 4239887 - | hypothetical protein TERM 5420 4240242 - 4240218 - R 72 -2.8 -5.05712 | gap 1, overlap 4240240 ATAAATAAGCAAAAA GCCCAG-CTGA TAAA TCAGGCAAGGC TTTGGTGTCAAATCC TERM 5421 4240257 - 4240267 + r 76 -8.2 -4.09685 | opp_overlap 4240256 4240255 CTTTGGTGTCAAATC CCCC TTA GGGG TTTTGCCGGATGGCG CKO_04594 4240604 - 4240311 - | hypothetical protein TERM 5422 4240589 - 4240606 + g 85 -2.1 -5.47159 | gap 1, overlap 4240593 CTTCGCGCGTCCAGC TAAGTGAC TGC GTCA-TTA TTTTTTCTCTTCCAG TERM 5423 4240593 - 4240603 + g 76 -5.4 -4.80737 | overlap 4240589 GCGCGTCCAGCTAAG TGAC TGC GTCA TTATTTTTTCTCTTC CKO_04595 4241239 - 4240604 - | hypothetical protein CKO_04596 4241809 - 4241258 - | hypothetical protein CKO_04597 4242596 - 4241814 - | hypothetical protein TERM 5424 4242417 - 4242407 - G 77 -4.6 -4.84359 | CCATGCCGATAAAAA CGCC AGA GACG ATAATAATGAGCATC CKO_04598 4243416 - 4242604 - | putative ABC transporter ATP-binding protein YrbF TERM 5425 4242737 - 4242749 + g 89 -3.3 -5.60993 | overlap 4242738 AGTTCCTTCGCGCTA CCGTG CGC CACGA TTTTTTTGTCCGCCA TERM 5426 4244130 - 4244153 + G 80 -5.2 -4.88067 | GTGGCGGAACTGCCG CGCGAAGG CGGCTTAC CCGTCGCG TTTTTGTGGCTGGGT CKO_04599 4243629 - 4244606 + | putative calcium/sodium:proton antiporter CKO_04600 4244621 - 4245607 + | D-arabinose 5-phosphate isomerase CKO_04601 4245627 - 4246193 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase CKO_04602 4246190 - 4246765 + | hypothetical protein TERM 5427 4246854 - 4246836 - gf 93 -11.8 -3.70773 | GGCGATACCGAACAA CCGATTCA TAT TGAATCGG ACCAGCAGTCACTGG CKO_04603 4246734 - 4247288 + | hypothetical protein CKO_04604 4247295 - 4248020 + | putative ABC transporter ATP-binding protein YhbG CKO_04605 4248068 - 4249501 + | RNA polymerase factor sigma-54 CKO_04606 4249524 - 4249811 + | putative sigma(54) modulation protein TERM 5428 4249839 - 4249865 + F 100 -15.2 -3.92522 | overlap 4249834 4249840 TTAGCGAGTGCAGGA CGGCCTGTTGTG ACG CACAACAGGCCA TTTGTACAGTTAGCG TERM 5429 4249840 - 4249864 + F 100 -18.7 -2.95192 | overlap 4249834 4249839 TAGCGAGTGCAGGAC GGCCTGTTGTG ACG CACAACAGGCC ATTTGTACAGTTAGC TERM 5430 4249885 - 4249924 + F 73 -10.8 -3.08471 | overlap 4249888 TACAGTTAGCGCTCC GAATCTGCCTCATCAGGA ATCA TCCTGATGGAACAGGTTC TTAGGTGAAATTATG CKO_04607 4249937 - 4250428 + | sugar-specific enzyme IIA component of PTS TERM 5431 4250806 - 4250791 - g 70 -3.2 -4.72272 | overlap 4250792 GCTTTCCAGCAAAAA TCTCTC CCTG GAGAGC GCCATCGACCAGGAA CKO_04608 4250465 - 4251319 + | hypothetical protein CKO_04609 4251316 - 4251588 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 5432 4251637 - 4251626 - f 74 -7.2 -4.36914 | opp_overlap 4251626 CTTTCCCCCAGAAAA CGCC ACCC GGCG TTTTTTTTATTCCCT TERM 5433 4251626 - 4251637 + F 100 -7.2 -6.11243 | opp_overlap 4251626 CTTTCCCCCAGAAAA CGCC ACCC GGCG TTTTTTTTATTCCCT TERM 5434 4252442 - 4252400 - g 78 -6.1 -4.80656 | gap 1, opp_overlap 4252400, overlap 4252401 4252402 AGGAAGAAGACAAAA GCGCGCTGCCGCTC-CCCTC TCTT GAGGCCGCGCGTCAGCGCAA TCTTAATACAGATGG TERM 5435 4252441 - 4252401 - g 71 -9.6 -3.46767 | gap 1, opp_overlap 4252400, overlap 4252400 4252402 GGAAGAAGACAAAAG CGCGCTGCCGCTC-CCCTC TCTT GAGGCCGCGCGTCAGCGCA ATCTTAATACAGATG CKO_04610 4251799 - 4252470 + | hypothetical protein CKO_04611 4253173 - 4252445 - | monofunctional biosynthetic peptidoglycan transglycosylase TERM 5436 4253092 - 4253055 - G 75 -6.1 -4.58663 | ATCACTGCGGAAAAA GGCACCGGAACGACGCT GAAC AGCGCGATGCCGCCGCC CCAAAAAACCGCCAG CKO_04612 4253823 - 4253170 - | isoprenoid biosynthesis protein with amidotransferase-like domain TERM 5437 4254034 - 4254056 + r 89 -4.7 -5.77853 | overlap 4254035 4254037 TGGCGCAGTATTCGC GCACCCCGG TCAAT CCGGGGTCA TTTTTTTTCCGCGTT TERM 5438 4254035 - 4254055 + r 76 -8.2 -4.05085 | overlap 4254034 4254037 GGCGCAGTATTCGCG CACCCCGG TCAAT CCGGGGTC ATTTTTTTTCCGCGT TERM 5439 4254037 - 4254053 + r 79 -10.8 -3.60685 | overlap 4254035 4254034 CGCAGTATTCGCGCA CCCCGG TCAAT CCGGGG TCATTTTTTTTCCGC CKO_04614 4256390 - 4254054 - | aerobic respiration control sensor protein ArcB TERM 5440 4254452 - 4254467 + gr 81 -4 -5.1861 | gap 1 TGCTCTCCTCTTCGT TAC-GGG TAT CCCAGTA TTTTTTAATCATGGC CKO_04615 4256610 - 4256230 - | hypothetical protein CKO_04616 4256963 - 4256589 - | hypothetical protein CKO_04617 4256970 - 4257503 + | hypothetical protein CKO_04618 4257537 - 4257680 + | hypothetical protein CKO_04619 4258016 - 4257861 - | hypothetical protein CKO_04621 4258371 - 4257910 - | hypothetical protein TERM 5441 4257996 - 4258014 + g 72 -11.8 -2.71918 | overlap 4257995 4257994 4257998 GCTGGAAGCTTTCTG GATGAGCA GCC TGCTCATC ATATTTATGCAGTAA TERM 5442 4259197 - 4259222 + GH 75 -11.1 -2.9462 | overlap 4259190 4259194 GAGCCGTGGGATGGC CCGGCGGGCAT CGTG ATGTCCGACGG TCGTTTCGCTGCCTG TERM 5443 4259369 - 4259355 - gH 95 -12.8 -4.09739 | CGAAGTCGTGGAAAA GGGCCG CGT CGGCCC CGGTGAACTGATGGT TERM 5444 4261827 - 4261806 - gH 73 -10.1 -3.4252 | CTGCACCGAGCATAA CCCGCCGTT TGAT AACGGCGTG CTGAACGCGCAACTG CKO_04620 4258156 - 4262652 + | glutamate synthase subunit alpha TERM 5445 4263514 - 4263496 - g 75 -11.8 -2.90496 | overlap 4263493 GCTTTGGCGAAACCA CTGACGAA CCG TTCGTCAG TATGGAAGGCAAACG CKO_04622 4262664 - 4264082 + | glutamate synthase subunit beta TERM 5446 4264086 - 4264133 + F 79 -9.1 -4.0942 | gap 1, opp_overlap 4264085, overlap 4264088 4264089 CTGGAAGTGTAATAC TTCTGGCTCCCCTGCCA-CAGC CTGAC GCTGATGGATGGGGAGCCAATA TTTCTCTGCTAAATA TERM 5447 4264088 - 4264131 + F 86 -11.7 -3.6393 | gap 1, opp_overlap 4264085, overlap 4264086 4264089 GGAAGTGTAATACTT CTGGCTCCCCTGCCA-CAGC CTGAC GCTGATGGATGGGGAGCCAA TATTTCTCTGCTAAA TERM 5448 4264089 - 4264130 + F 93 -15.2 -2.77876 | gap 1, opp_overlap 4264085, overlap 4264088 4264086 GAAGTGTAATACTTC TGGCTCCCCTGCCA-CAGC CTGAC GCTGATGGATGGGGAGCCA ATATTTCTCTGCTAA TERM 5449 4264593 - 4264629 + G 79 -11.2 -3.73775 | gap 2, opp_overlap 4264599, overlap 4264599 TATGTTTTCAGTATA T-TGAA-ATTCCGCAGAC AGT GTCTGCGGAATCTTCACA TTTGATACAACTCGC TERM 5450 4264599 - 4264621 + G 100 -16.4 -3.13382 | opp_overlap 4264599, overlap 4264593 TTCAGTATATTGAAA TTCCGCAGAC AGT GTCTGCGGAA TCTTCACATTTGATA TERM 5451 4264621 - 4264599 - g 100 -16.4 -3.727 | opp_overlap 4264599 4264593 TTCAGTATATTGAAA TTCCGCAGAC AGT GTCTGCGGAA TCTTCACATTTGATA TERM 5452 4265188 - 4265204 + G 71 -5.7 -4.36914 | opp_overlap 4265176 4265188, overlap 4265188 AATGCCGGGAGAAAA CCCGCCC GTC GGGTTGG TTTTGTGCGCAGGAA TERM 5453 4265200 - 4265188 - g 71 -6.2 -4.37658 | opp_overlap 4265188 4265188, overlap 4265176 AATGCCGGGAGAAAA CCCG CCCGT CGGG TTGGTTTTGTGCGCA CKO_04623 4264292 - 4265377 + | hypothetical protein TERM 5454 4265478 - 4265504 + T 83 -9.4 -4.29738 | opp_overlap 4265475 4265474 4265473, overlap 4265480 4265501 AGATATAAAACGTTA CACCGGATGGCT ATA AACCATCCGGTA TTTTCATGCCTCTAA TERM 5455 4265480 - 4265502 + T 93 -12 -3.74902 | opp_overlap 4265475 4265474 4265473, overlap 4265478 4265501 ATATAAAACGTTACA CCGGATGGCT ATA AACCATCCGG TATTTTCATGCCTCT CKO_04624 4265978 - 4265508 - | hypothetical protein CKO_04625 4266847 - 4265975 - | N-acetylmannosamine kinase CKO_04626 4267563 - 4266844 - | N-acetylmannosamine-6-phosphate 2-epimerase TERM 5456 4267491 - 4267504 + g 80 -5.3 -4.88388 | opp_overlap 4267487 4267486, overlap 4267485 AGACAATCAACCCGC CATTG GCGG CAATG TTTTTATCCAGTTGT CKO_04628 4269073 - 4267583 - | putative sialic acid transporter TERM 5457 4269057 - 4269072 + Gg 75 -4 -4.93365 | TACCACGGGATATTC TGGGTA GAAG TACTCA TTTTTCATTCTCCCG CKO_04627 4269030 - 4269176 + | hypothetical protein CKO_04629 4270087 - 4269194 - | N-acetylneuraminate lyase TERM 5458 4269776 - 4269764 - G 74 -4.7 -4.81863 | AAACGGATAATAAAA CGGCG TCA CGGCG GAAACGGCATCAAAA TERM 5459 4270188 - 4270176 - R 72 -9.1 -3.54951 | opp_overlap 4270175 4270173 4270170, overlap 4270160 CACCCCAGTACAGAA CGCAC AGA GTGCG ATCTACTTCACTAAA CKO_04630 4271013 - 4270225 - | transcriptional regulator NanR TERM 5460 4271100 - 4271120 + r 77 -11.1 -3.20896 | opp_overlap 4271102, overlap 4271098 4271096 4271102 GCAGGCGTGAAAAAA AACAGGCCC TCA GGGCCTGTC TGTCTTGGTTACTTC TERM 5461 4271118 - 4271102 - R 100 -13.7 -5.75945 | opp_overlap 4271100 4271098 4271096 4271102 AGGCGTGAAAAAAAA CAGGCCC TCA GGGCCTG TCTGTCTTGGTTACT TERM 5462 4271102 - 4271118 + r 86 -13.7 -3.15548 | opp_overlap 4271102, overlap 4271100 4271098 4271096 AGGCGTGAAAAAAAA CAGGCCC TCA GGGCCTG TCTGTCTTGGTTACT CKO_04631 4271629 - 4271129 - | ClpXP protease specificity-enhancing factor CKO_04632 4272273 - 4271635 - | stringent starvation protein A TERM 5463 4271865 - 4271850 - G 73 -10.4 -3.44848 | overlap 4271848 GTTTTTGACCAAACA CAGGCG CGAT CGCCTG CAACTCTTCACGCAG TERM 5464 4272537 - 4272550 + r 100 -9.5 -5.02074 | opp_overlap 4272537 TTTTCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCCAATGG TERM 5465 4272550 - 4272537 - R 100 -9.5 -5.60993 | opp_overlap 4272537 TTTTCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCCAATGG CKO_04633 4272981 - 4272589 - | 30S ribosomal protein S9 CKO_04634 4273425 - 4272997 - | 50S ribosomal protein L13 CKO_04635 4273692 - 4273513 - | hypothetical protein CKO_04636 4274852 - 4273728 - | hypothetical protein TERM 5466 4274039 - 4274049 + g 70 -6.8 -4.14243 | TGACGAAGGAGACCG CCAG CGT CTGG TTTTCCACTCCCATC TERM 5467 4274715 - 4274725 + g 77 -8.2 -4.11216 | TCCGCCGGTTTGCGG CGCC GGA GGCG TTTTGGCGATCAGCG TERM 5468 4275306 - 4275283 - g 88 -11 -4.13282 | opp_overlap 4275283 AGCACATGGCGAAAA GCTCCAGCAG CCTG CTGCCGGAAC TGTCTGCGGAATCGA CKO_04637 4275039 - 4275443 + | cytochrome d ubiquinol oxidase subunit III TERM 5469 4275467 - 4275487 + GF 95 -14.7 -3.24478 | overlap 4275465 CGTTAAGAAATTTTT CGGGCGCAG CGG TTGCGCCCG TCTCTTCTCTCCTGT CKO_04638 4275112 - 4275525 + | hypothetical protein TERM 5470 4276836 - 4276810 - g 77 -3.5 -5.06103 | opp_overlap 4276815 ATAACGTTGAAAAAA GCAGTCCCGCC GCCCA GGCCGGTTTGC ACAAAGATGACGTGA CKO_04639 4275612 - 4276979 + | serine endoprotease TERM 5471 4277027 - 4276984 - f 76 -11.8 -2.52464 | gap 1, opp_overlap 4276991, overlap 4277001 TCCTGCGTTAAGTCA TCGTTAACCGGACATCAGCCC CGC GTGC-GATGTCCGGTTAACTC GTGGTATGCTGCTGC TERM 5472 4276991 - 4277020 + F 82 -12.9 -3.11192 | gap 1, opp_overlap 4276984 4277001 TTAAGTCATCGTTAA CCGGACATCAGCCC CGC GTGC-GATGTCCGG TTAACTCGTGGTATG CKO_04640 4277071 - 4278138 + | serine endoprotease TERM 5473 4278174 - 4278144 - T 74 -10.7 -3.27667 | gap 1, opp_overlap 4278152, overlap 4278152 GACAAATTAACGTAA TAAAAAAACCGGAG TCAT CTCCGG-TTTTTTA CTGTGTCTCGGTTAA TERM 5474 4278167 - 4278152 - T 100 -10.4 -5.83226 | opp_overlap 4278152, overlap 4278144 AACGTAATAAAAAAA CCGGAG TCAT CTCCGG TTTTTTACTGTGTCT TERM 5475 4278152 - 4278167 + T 100 -10.4 -5.25893 | opp_overlap 4278152 4278144 AACGTAATAAAAAAA CCGGAG TCAT CTCCGG TTTTTTACTGTGTCT TERM 5476 4278305 - 4278317 + T 76 -9.1 -3.66166 | overlap 4278304 TTGTTAACGAACTCT TCGCC CAG GGCGA TATCTTTTTTCAGCG CKO_04641 4279224 - 4278286 - | malate dehydrogenase CKO_04642 4279661 - 4280131 + | arginine repressor TERM 5477 4280292 - 4280305 + G 72 -3.9 -4.75309 | ACAAATTGCAAAATT TCATA TCCT TATGA TTTTATTGAATTTAA CKO_04643 4280250 - 4280384 + | hypothetical protein TERM 5478 4280708 - 4280686 - g 89 -3.3 -5.45652 | overlap 4280698 ATGCTGAACAAAAAA GCAGAAGCA AACGG CGCATCCGC CTATCAGATTACTGA CKO_04644 4280509 - 4280772 + | hypothetical protein TERM 5479 4280799 - 4280817 + T 100 -13.1 -5.59879 | CTAGTCCGACGACTT GCCCCCG ACTGC CGGGGGC TTTTTTATGTTTGTC CKO_04645 4281109 - 4280834 - | hypothetical protein TERM 5480 4280903 - 4280926 + g 71 -4.4 -4.57073 | gap 1, opp_overlap 4280903 4280896 4280894 4280905, overlap 4280905 ATCAAACAGCAAAAT CAGCGC-GCCG TAA CGCCTGCGCAG TTTTTCCGGCAGATG CKO_04646 4282587 - 4281139 - | hypothetical protein TERM 5481 4281428 - 4281409 - G 70 -7 -4.20136 | opp_overlap 4281422, overlap 4281410 ACTGGTAAAACGAAA GCAGGCCG CGAC CGGCCCGA AGGTCTCTTCACTGG TERM 5482 4282667 - 4282649 - R 100 -11.7 -5.65177 | opp_overlap 4282639 4282664 ATAGCCACAAAAAAA CCGACGC TTTTG GCGTCGG CTCCTGAGTGTTAGT CKO_04647 4284645 - 4282678 - | p-hydroxybenzoic acid efflux subunit AaeB TERM 5483 4283439 - 4283428 - G 73 -5.8 -4.41348 | CGTCCCGTAAATAAA GTCG ATAG CGAC CATGCGCGGGTTGGG CKO_04648 4285583 - 4284651 - | p-hydroxybenzoic acid efflux subunit AaeA TERM 5484 4284962 - 4284980 + g 76 -8.8 -3.93664 | TCTCTGCGCGATAGC CTGGACGG ACG CCTTCCAG TTTGGTCTCTTCCAT TERM 5485 4285256 - 4285271 + g 74 -4.6 -4.8048 | overlap 4285257 CAAGGCGGTTACGGC GGCCAG CCTC CTGGCG TTTTTCCTGTGCCAG CKO_04650 4285794 - 4285591 - | hypothetical protein TERM 5486 4285694 - 4285677 - Gg 71 -7.7 -3.99228 | AGACGAAGTCATAAA TGCCGGT TGGA ACCAGCA TCCGGCGCACCAGCC CKO_04649 4285676 - 4285900 + | hypothetical protein CKO_04651 4285978 - 4286907 + | putative DNA-binding transcriptional regulator TERM 5487 4286997 - 4286969 - T 89 -11.1 -4.09685 | gap 1, overlap 4286979 CCGCACCCGGCAAAA GGCCCGATAACG TAACGG CGT-ATCGGGCC TACAAAACGACTTTA CKO_04652 4288455 - 4287010 - | protease TldD TERM 5488 4288102 - 4288127 + g 80 -4.6 -4.99134 | opp_overlap 4288089 AATGGCGGTATAGAG CATCGGGTGC TCCACC GCGCCCAGTG TTTTTACTTTGCCGT TERM 5489 4288172 - 4288202 + g 78 -13.2 -2.66435 | opp_overlap 4288162, overlap 4288167 4288169 ACAATGGTACGCGCG GCCTGCGCGCTCTG CTC CAGCGCTTGCAGGC TGATCTGATCGGCAT CKO_04653 4288594 - 4288463 - | hypothetical protein TERM 5490 4288553 - 4288578 + g 83 -9.7 -4.20696 | gap 1 GTAGAAGTTATGTAG GCCGGATAAGCG CAG CGCC-ATCCGGC TTTTGCAGTTCGTCA CKO_04654 4292462 - 4288641 - | hypothetical protein TERM 5491 4291139 - 4291170 + g 80 -9.4 -4.09685 | gap 1 TTTCATACGGCATTT CGGCCTGCTGCATCG AGG CGGT-CAGCGCGCCG TTTTCCACGCTGCCG TERM 5492 4291568 - 4291554 - G 70 -3.4 -4.70583 | opp_overlap 4291566, overlap 4291556 GTCAGGAATATAAAA CTGCCA GCC CGGCTG TTCACGCGTAATGTG TERM 5493 4292476 - 4292466 - R 74 -5.4 -4.56597 | CTTGTCTGCCAAAAA TGTG ACT CACA AACCCGTTATCCGGC CKO_04655 4293978 - 4292509 - | ribonuclease G CKO_04656 4294561 - 4293968 - | Maf-like protein TERM 5494 4294611 - 4294585 - R 84 -10.8 -3.83998 | opp_overlap 4294574 TTACTGCACAGCAAA CTGCTGGCGCAC TTT GCGCATCAGCAG GAAAAGCCAGGGCCA CKO_04657 4295058 - 4294570 - | rod shape-determining protein MreD CKO_04658 4296077 - 4295058 - | cell wall structural complex MreBCD transmembrane component MreC TERM 5495 4295754 - 4295783 + g 74 -7.7 -4.1891 | opp_overlap 4295756, overlap 4295762 ACGCAGCGGCGAACC CAGCAGCTCGCGC AAAC GCGCGTTCTCCTG TTTGTATTGCCCCAG TERM 5496 4295762 - 4295775 + g 71 -9.5 -3.59627 | opp_overlap 4295756, overlap 4295754 GCGAACCCAGCAGCT CGCGC AAAC GCGCG TTCTCCTGTTTGTAT TERM 5497 4295802 - 4295814 + g 71 -4.8 -4.56775 | opp_overlap 4295809, overlap 4295812 GTATTGCCCCAGCAT CAGC AATTC GCTG TTTTTCAGCAACAGT TERM 5498 4295831 - 4295847 + g 80 -9.3 -4.19506 | TTTTCAGCAACAGTT CCTGGCG CAG CGCCCGG TTTTCAAGTTCGAGT CKO_04659 4297185 - 4296142 - | hypothetical protein CKO_04660 4299433 - 4297493 - | regulatory protein CsrD TERM 5499 4297678 - 4297688 + g 74 -6.8 -4.33808 | CCACCAGGCTCTGTA CCAG CAA CTGG TTTTCCGTTCGTTTC TERM 5500 4298405 - 4298383 - G 76 -9.2 -3.92373 | TACGCCATGCACAAA TGCCGATATG TAC CATATCGTCA CGATCGAGCTTTTTA TERM 5501 4298739 - 4298726 - G 78 -2.3 -5.14563 | TTGGTTATCAAAAAA CAGGC GATT GCCCA GCCCGGTTTTGACAT TERM 5502 4299367 - 4299348 - G 71 -4.2 -4.62336 | ATGGCATTGTAAAAA CTCAGCGA GCAG CCGATGAG CGTAACGAAGATCGT TERM 5503 4300007 - 4300019 + G 70 -6.9 -4.08945 | opp_overlap 4299997, overlap 4300008 4300014 GAAATGCGATGATTA TCGGC ACC GCCGG TTTTACCGCCATGCT TERM 5504 4300211 - 4300181 - g 76 -10.5 -3.62096 | gap 1 TGTCAGGACGCGAAA GCACCCACGACTAC CTGC GTAGCC-TGGGCGC CAACCGCATTCTGGG CKO_04661 4299637 - 4300611 + | hypothetical protein TERM 5505 4300649 - 4300684 + F 76 -11.9 -2.62983 | TCGCGTTAACGTTTC GCCTCCGTCATGCTT AAAAAA ACGCATGACGGAGGA TGCTATGAAAATGAA TERM 5506 4300708 - 4300734 + G 80 -4.3 -5.0916 | gap 1, opp_overlap 4300706 4300708 AAATGAAAAAACTGA CGGAAGCCGACG TAAC CG-CGGAGTCCG TTTTTATGTTGCAGC TERM 5507 4301550 - 4301572 + G 73 -5.6 -4.63218 | gap 1 CACGTTGATCATCCG CGCT-GGTC ACAGGC GACCGAGCG TTTTATTGGCGCAGG CKO_04662 4300674 - 4301690 + | putative sulfite oxidase subunit YedY TERM 5508 4301719 - 4301709 - gf 80 -5.4 -4.96848 | CGTCTGACACAAAAA CAGA TCG TCTG GCTAAAAGTACTGCT CKO_04663 4301691 - 4302311 + | putative sulfite oxidase subunit YedZ CKO_04664 4302188 - 4302379 + | hypothetical protein CKO_04665 4302547 - 4302999 + | 3-dehydroquinate dehydratase CKO_04666 4303022 - 4303492 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 5509 4304003 - 4303980 - g 73 -9.4 -3.78775 | opp_overlap 4304001 CCGGTTATTATCAAA GCGTCCGGCG GCGG CGGCGGTCGC GGCATGCGCGTTGTG CKO_04667 4303503 - 4304852 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 5510 4304867 - 4304892 + F 100 -11.9 -5.47218 | opp_overlap 4304872, overlap 4304872 AGCGTGCGTTAATTG AAAAAGGCCGG TTTT CCGGCCTTTTG TTTTTTTCCCTCCGG TERM 5511 4304872 - 4304887 + F 100 -11.8 -5.55855 | opp_overlap 4304872, overlap 4304867 GCGTTAATTGAAAAA GGCCGG TTTT CCGGCC TTTTGTTTTTTTCCC TERM 5512 4304887 - 4304872 - f 100 -11.8 -4.74103 | opp_overlap 4304872 4304867 GCGTTAATTGAAAAA GGCCGG TTTT CCGGCC TTTTGTTTTTTTCCC CKO_04668 4304959 - 4305201 + | hypothetical protein CKO_04669 4305188 - 4306642 + | sodium/panthothenate symporter CKO_04670 4306654 - 4307535 + | ribosomal protein L11 methyltransferase TERM 5513 4307548 - 4307569 + F 100 -13.7 -4.58283 | TAATCAGTCCTTTCC GGCGTGGTC ATCT GGCCACGCC TTTTTCACACGATTC CKO_04671 4307677 - 4308453 + | hypothetical protein TERM 5514 4308506 - 4308475 - f 72 -8.2 -3.82665 | gap 1, opp_overlap 4308476 4308478 4308481, overlap 4308478 4308481 GATCACACTATGAAA CGATAATCTGCTGGT TAA ATCAGCAGATTAT-G TTGTCCAGCCGTCAG TERM 5515 4308476 - 4308506 + F 74 -10.6 -3.29511 | opp_overlap 4308475 4308478 4308481, overlap 4308478 4308481 ATCACACTATGAAAC GATAATCTGCTGGT TAA ATCAGCAGATTATG TTGTCCAGCCGTCAG TERM 5516 4308504 - 4308478 - f 75 -11 -2.99207 | opp_overlap 4308476 4308478 4308481, overlap 4308475 4308481 CACACTATGAAACGA TAATCTGCTGGT TAA ATCAGCAGATTA TGTTGTCCAGCCGTC TERM 5517 4308478 - 4308504 + F 83 -13.2 -3.21593 | opp_overlap 4308478 4308475 4308481, overlap 4308476 4308481 CACACTATGAAACGA TAATCTGCTGGT TAA ATCAGCAGATTA TGTTGTCCAGCCGTC TERM 5518 4308481 - 4308501 + F 83 -10.5 -3.7511 | opp_overlap 4308481 4308478 4308475, overlap 4308478 4308476 ACTATGAAACGATAA TCTGCTGGT TAA ATCAGCAGA TTATGTTGTCCAGCC TERM 5519 4308711 - 4308697 - f 76 -4.2 -5.00884 | overlap 4308698 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG TERM 5520 4309616 - 4309591 - g 70 -9.8 -3.41341 | gap 1, overlap 4309589 AATTGCACGTAAACA CGT-CTCCTGG TATCT CCAGGAGCACG CTCCAAATGACCAGT CKO_04672 4308746 - 4309711 + | tRNA-dihydrouridine synthase B CKO_04673 4309735 - 4310031 + | DNA-binding protein Fis TERM 5521 4310061 - 4310086 + F 100 -8.2 -5.46657 | opp_overlap 4310061 TTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATTCGCGTC TERM 5522 4310086 - 4310061 - f 74 -6 -4.56597 | opp_overlap 4310061 TTGCTTGTTTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATTCGCGTC CKO_04674 4310118 - 4311002 + | putative methyltransferase CKO_04675 4311064 - 4311249 + | hypothetical protein CKO_04676 4311964 - 4311302 - | DNA-binding transcriptional regulator EnvR TERM 5523 4312287 - 4312299 + H 74 -3.4 -4.99043 | overlap 4312281 4312282 TGATAATTTGTAGGA TAGC CAACT GCTA TTTTATTTGTGCGCG CKO_04677 4312371 - 4313528 + | hypothetical protein TERM 5524 4313951 - 4313961 + G 77 -4.6 -4.86731 | opp_overlap 4313938 AGCAGTAGCTTCCTT CTGG TGG CCGG TTTTGTTTCCGACAA CKO_04678 4313540 - 4316653 + | hypothetical protein TERM 5525 4316667 - 4316682 + F 100 -11.8 -4.58663 | opp_overlap 4316666 4316664 4316663 AACCACTAAAATTAC GGCGCC CTCG GGCGCC TTTTTCCAAAATAAT CKO_04679 4316923 - 4317144 + | hypothetical protein TERM 5526 4317184 - 4317145 - f 83 -13.8 -2.66695 | opp_overlap 4317157, overlap 4317157 GCCCTGACGAAATAG GTTTTATTAAAAGCGCGG CAAC CCGCGCTTTTAATATAAG ACAAAGCTCTGGACA TERM 5527 4317157 - 4317172 + F 95 -11.8 -4.34402 | opp_overlap 4317145 4317157 TAGGTTTTATTAAAA GCGCGG CAAC CCGCGC TTTTAATATAAGACA TERM 5528 4317172 - 4317157 - f 95 -11.8 -4.2558 | opp_overlap 4317157, overlap 4317145 TAGGTTTTATTAAAA GCGCGG CAAC CCGCGC TTTTAATATAAGACA CKO_04680 4317367 - 4317705 + | hypothetical protein CKO_04681 4317578 - 4318603 + | hypothetical protein TERM 5529 4318939 - 4318970 + G 70 -3 -4.7329 | gap 1 TCTGGTCGGCTTGCT CAATACCCTGT-TGG TCT CCGCACTGTGTATTG TTTTTGCGTCATTTT CKO_04682 4318673 - 4319854 + | hypothetical protein CKO_04683 4319861 - 4320967 + | hypothetical protein CKO_04684 4320975 - 4321733 + | hypothetical protein TERM 5530 4321819 - 4321853 + TF 79 -10.7 -3.60473 | gap 1, opp_overlap 4321826, overlap 4321814 4321825 TCAGGGCGCGTAAAC GCAAAAAGGCCCGGTC TTTC GACCGGGCCCTTC-GC TTGATTTGATGTCTG TERM 5531 4321825 - 4321848 + TF 86 -13.8 -3.26998 | opp_overlap 4321826, overlap 4321819 4321814 CGCGTAAACGCAAAA AGGCCCGGTC TTTC GACCGGGCCC TTCGCTTGATTTGAT TERM 5532 4321847 - 4321826 - Tf 100 -17.3 -4.81249 | opp_overlap 4321825 4321819 4321814 GCGTAAACGCAAAAA GGCCCGGTC TTTC GACCGGGCC CTTCGCTTGATTTGA TERM 5533 4324730 - 4324742 + TF 72 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 5534 4325503 - 4325516 + TF 75 -6.7 -4.45807 | overlap 4325507 ACTGAAGTCTCAATC GCAAG ACGC CTTGC TTCTTTCTTTTCATC TERM 5535 4327291 - 4327303 + TF 71 -7.7 -4.00532 | CTCTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG CKO_04692 4327584 - 4327270 - | hypothetical protein CKO_04691 4327583 - 4328137 + | hypothetical protein CKO_04693 4328370 - 4328113 - | hypothetical protein TERM 5536 4328218 - 4328258 + g 87 -13.3 -3.20723 | opp_overlap 4328218 4328243 AAAGTCTGCCAACCA CCGTTCTGGCGTATCGC CGCCAAA GCGATGCGCCAGCGTGG TTCCCTTGATAGCAC CKO_04694 4329185 - 4328367 - | shikimate 5-dehydrogenase CKO_04695 4329792 - 4329190 - | putative ribosome maturation factor CKO_04696 4330309 - 4329755 - | hypothetical protein TERM 5537 4330141 - 4330189 + gr 82 -11.8 -3.38768 | opp_overlap 4330138 4330149, overlap 4330152 TCCCCTCCAGAACTT TGACGATATGTCCGTCTGCTGA CGATT TCAGCGGACGGACATAATCACA TTCTGGATAGTGTGA TERM 5538 4330181 - 4330149 - GR 100 -16.4 -2.8001 | opp_overlap 4330141 4330152, overlap 4330138 AGAACTTTGACGATA TGTCCGTCTGCTGA CGATT TCAGCGGACGGACA TAATCACATTCTGGA TERM 5539 4330248 - 4330274 + gr 83 -6.4 -4.83615 | opp_overlap 4330247, overlap 4330251 GAGCGAATAACAAGT TCAGCCCCGCAC TGT GGGCAGGGCTCA TTTTTATGCACCGTA CKO_04697 4330794 - 4330336 - | hypothetical protein CKO_04698 4331875 - 4330781 - | hypothetical protein TERM 5540 4331737 - 4331761 + g 71 -10.7 -3.30159 | opp_overlap 4331753 4331754 CATCCAGCGCTTTTT GCGGGACGGTT AAA AAGCGTTCCGC TTGTCGGGACGTTAA CKO_04699 4332036 - 4332545 + | peptide deformylase TERM 5541 4332606 - 4332628 + F 100 -17.8 -3.7511 | overlap 4332627 GTACACCTGACTTTG CAGCGCGTCA TCT TGACGCGCTG TTGTCTTCTGGACAC TERM 5542 4332709 - 4332697 - f 74 -5.5 -4.58395 | TGGACGCGGTAAAAA GCTGA TGC CCAGC CCGGTGAAAGTGTTG TERM 5543 4332810 - 4332781 - g 70 -2.9 -4.77165 | gap 1, overlap 4332782 GCGCCCACAAGAAAA CCAGCAT-TTAGTC GCA GACTTACACGCTGA CGTAATGGTCGTGGT CKO_04700 4332701 - 4333507 + | hypothetical protein TERM 5544 4333524 - 4333542 + F 100 -10.2 -5.61881 | overlap 4333525 GGTCACGTCTTACTA CGCCCGGT GTT ACCGGGCA TTTTTATTTTTGCGG TERM 5545 4333525 - 4333541 + F 100 -13.7 -3.95502 | overlap 4333524 GTCACGTCTTACTAC GCCCGGT GTT ACCGGGC ATTTTTATTTTTGCG TERM 5546 4333676 - 4333662 - g 70 -2.8 -4.82667 | opp_overlap 4333673, overlap 4333674 CCACTACAGCAAAAA GTCTCC GAT AAAGAC AAAGCGCTGCTTCAG CKO_04701 4333560 - 4334846 + | 16S rRNA methyltransferase B CKO_04702 4334868 - 4336244 + | potassium transporter peripheral membrane component TERM 5547 4336251 - 4336269 + F 86 -11.7 -3.5486 | overlap 4336249 TTCCTGTAATTATTT GGGCGCT AATGC AGCGCCC TCTTTAATTCCCCTG CKO_04703 4336386 - 4336796 + | large-conductance mechanosensitive channel TERM 5548 4336859 - 4336813 - T 100 -20.4 -2.93817 | overlap 4336817 AAGCCTTAATAAGCA GAAAGCCAGTGGTAAAAAAGTG ATT CACTTTCTTGCCACTGGCCTCC CAGTTACCCCGATTG TERM 5549 4336855 - 4336817 - T 100 -19.8 -4.14257 | overlap 4336813 CTTAATAAGCAGAAA GCCAGTGGTAAAAAAGTG ATT CACTTTCTTGCCACTGGC CTCCCAGTTACCCCG CKO_04704 4337011 - 4336793 - | hypothetical protein CKO_04705 4337515 - 4337069 - | zinc-responsive transcriptional regulator CKO_04706 4337873 - 4337505 - | hypothetical protein TERM 5550 4337938 - 4337971 + r 79 -11.9 -3.16921 | opp_overlap 4337948, overlap 4337948 TGGGGATACGGCGGA TATAAAAAAACCCGC CGGA GCGGGTTTTTTTACG TTACTACAGATTACT TERM 5551 4337948 - 4337961 + r 100 -9.5 -5.54192 | opp_overlap 4337948, overlap 4337938 GCGGATATAAAAAAA CCCGC CGGA GCGGG TTTTTTTACGTTACT TERM 5552 4337961 - 4337948 - R 100 -9.5 -5.71712 | opp_overlap 4337938 4337948 GCGGATATAAAAAAA CCCGC CGGA GCGGG TTTTTTTACGTTACT CKO_04707 4338311 - 4337982 - | hypothetical protein CKO_04708 4339398 - 4338409 - | DNA-directed RNA polymerase subunit alpha TERM 5553 4338492 - 4338504 + g 76 -3.4 -5.10497 | CCAGCACGTCTTTAA TCTC AGTAA GAGA TTTTTTACCTAGGTT TERM 5554 4339439 - 4339421 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT CKO_04709 4340044 - 4339424 - | 30S ribosomal protein S4 TERM 5555 4339534 - 4339544 + g 70 -6.8 -4.12188 | overlap 4339531 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 5556 4340071 - 4340089 + H 76 -4.4 -5.00616 | opp_overlap 4340071 4340075 AACAAACCTGGAAAA CGAAGCGT TAT ACGCGACG TTTTTTCGGCGGACG CKO_04710 4340114 - 4340494 + | hypothetical protein TERM 5557 4340501 - 4340526 + T 70 -8.9 -3.39449 | overlap 4340502 ATTTCTTGATCGGTT TGCGCGGACCC TTAC GGGTACGTGCG TTGGTCTTGGTACGC TERM 5558 4340502 - 4340525 + T 71 -10.2 -2.63348 | overlap 4340501 TTTCTTGATCGGTTT GCGCGGACCC TTAC GGGTACGTGC GTTGGTCTTGGTACG CKO_04711 4340840 - 4340484 - | 30S ribosomal protein S13 TERM 5559 4340665 - 4340683 + g 85 -8.8 -4.44667 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTTCTTCAGACA TERM 5560 4340957 - 4340928 - R 100 -12.3 -4.6645 | gap 1 TACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA CKO_04712 4342466 - 4341135 - | preprotein translocase subunit SecY TERM 5561 4342033 - 4342002 - G 80 -10.2 -3.81755 | overlap 4342008 AGCGGTGAAATAGAA TGCAAAGCCCGG ATTCATTA CCAGGCCTTGCA TACCAGGCATATTCG CKO_04713 4342908 - 4342474 - | 50S ribosomal protein L15 TERM 5562 4342854 - 4342867 + g 73 -5.2 -4.59853 | opp_overlap 4342847, overlap 4342847 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG CKO_04715 4343091 - 4342912 - | 50S ribosomal protein L30 CKO_04716 4343598 - 4343095 - | 30S ribosomal protein S5 CKO_04717 4343966 - 4343613 - | 50S ribosomal protein L18 CKO_04720 4344914 - 4344522 - | 30S ribosomal protein S8 CKO_04721 4345253 - 4344948 - | hypothetical protein CKO_04722 4345807 - 4345268 - | 50S ribosomal protein L5 TERM 5563 4345645 - 4345663 + g 71 -6 -4.30987 | TTGCTGCCAGGTCAG CTGCTG CGTTATC CAGCAG TTTCTTGTCAGCGAT CKO_04723 4346136 - 4345822 - | 50S ribosomal protein L24 CKO_04724 4346518 - 4346147 - | 50S ribosomal protein L14 TERM 5564 4346592 - 4346577 - R 88 -7.5 -5.0133 | overlap 4346579 CAGGTCGTTAAAAAA GCCCC ATATCG GGGGC GCGGCATTATAACAC TERM 5565 4346659 - 4346634 - R 100 -12.7 -5.252 | opp_overlap 4346634 4346638 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGGG TERM 5566 4346634 - 4346659 + r 77 -10.5 -3.34895 | opp_overlap 4346634, overlap 4346638 TATGGGTAGAAAAAA TAAACGGCCCA TCGC TGAGCCGTTTA TTCGTTGAGAATGGG TERM 5567 4346638 - 4346655 + r 74 -6.9 -4.3255 | opp_overlap 4346634, overlap 4346634 GGTAGAAAAAATAAA CGGCCCA TCGC TGAGCCG TTTATTCGTTGAGAA CKO_04725 4346936 - 4346682 - | 30S ribosomal protein S17 TERM 5568 4346904 - 4346857 - G 86 -9.5 -4.36914 | gap 2, opp_overlap 4346876 GGGTGTTTCACAAAA CGTTCGATAGCAACAACAATGGA TTTC TCCATT-TTGTCGCTAAC-AACG CGACCTTGCAGAGTA CKO_04726 4347127 - 4346936 - | 50S ribosomal protein L29 CKO_04727 4347537 - 4347127 - | 50S ribosomal protein L16 CKO_04729 4348251 - 4347550 - | 30S ribosomal protein S3 TERM 5569 4347579 - 4347594 + gH 70 -3.2 -4.70626 | overlap 4347580 4347591 TACGCTGCTGCTTTT TCGGTT GAGC AGCCGG TTTTTCCGGTTGTTC CKO_04730 4348601 - 4348269 - | 50S ribosomal protein L22 CKO_04728 4348251 - 4348658 + | hypothetical protein CKO_04732 4348894 - 4348616 - | 30S ribosomal protein S19 CKO_04733 4349678 - 4348911 - | 50S ribosomal protein L2 TERM 5570 4349768 - 4349788 + GrH 75 -9.7 -3.57462 | opp_overlap 4349771, overlap 4349771 CTCAGCGCCGCCAAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA CKO_04735 4350052 - 4349750 - | 50S ribosomal protein L23 CKO_04731 4348878 - 4349804 + | hypothetical protein CKO_04737 4350654 - 4350049 - | 50S ribosomal protein L4 TERM 5571 4350622 - 4350634 + Gg 73 -10.5 -3.42663 | opp_overlap 4350617, overlap 4350621 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT CKO_04734 4350013 - 4350648 + | hypothetical protein CKO_04738 4351294 - 4350665 - | 50S ribosomal protein L3 TERM 5572 4351256 - 4351270 + Gg 82 -5.6 -5.02074 | opp_overlap 4351237 4351255, overlap 4351258 ATCTTCAGTGAAGAT GCGGGT CAT ACCCAC TTTTTTACCGACTAA CKO_04736 4350584 - 4351285 + | hypothetical protein CKO_04739 4351638 - 4351327 - | hypothetical protein CKO_04740 4351966 - 4351829 - | hypothetical protein CKO_04742 4352016 - 4351861 - | hypothetical protein TERM 5573 4351888 - 4351905 + g 85 -2 -5.45802 | gap 1, overlap 4351888 4351889 TAATGCGAGCAACTT C-GCACA TGCAT TGTGCCG TTTTTGTTTTGCGCA TERM 5574 4352410 - 4352445 + Gr 89 -8.9 -4.55491 | gap 1, opp_overlap 4352410, overlap 4352405 AGGGGCATTAAAAAA CCCGCTGCCGTTCGGG CCATT TCTGG-CGGCTGCGGG TTTTATCATTGGCTG TERM 5575 4352445 - 4352410 - gR 81 -3.8 -5.14965 | gap 1, opp_overlap 4352410 4352405 AGGGGCATTAAAAAA CCCGCTGCCGTTCGG GCCATTT CTGG-CGGCTGCGGG TTTTATCATTGGCTG CKO_04741 4351985 - 4352485 + | hypothetical protein CKO_04743 4352958 - 4352482 - | bacterioferritin, iron storage and detoxification protein TERM 5576 4352799 - 4352775 - G 74 -2.2 -5.09762 | gap 1, opp_overlap 4352775 4352770 4352759 4352777, overlap 4352770 4352777 CCTCAAGAAATAAAA TACGCTCGATA TATT TATC-AGCGTG TTTCATTTCATCGAT CKO_04744 4353224 - 4353030 - | bacterioferritin-associated ferredoxin TERM 5577 4353376 - 4353391 + r 100 -11.8 -4.65895 | opp_overlap 4353376 GACAGACAGCAAAAA GGGCGC CGAA GCGCCC TTTTTAAGTGCAGAA TERM 5578 4353391 - 4353376 - R 100 -11.8 -4.86133 | opp_overlap 4353376 GACAGACAGCAAAAA GGGCGC CGAA GCGCCC TTTTTAAGTGCAGAA CKO_04745 4354651 - 4353422 - | elongation factor Tu TERM 5579 4354651 - 4354626 - G 86 -15.5 -2.78935 | opp_overlap 4354616 ATATTCCTTACTATA GTGCTCTCCCC TTCA GGAGAGAGCAC GGGACTTAGGTTTTA CKO_04746 4356791 - 4354677 - | elongation factor G TERM 5580 4355592 - 4355614 + g 72 -12 -2.80438 | opp_overlap 4355603, overlap 4355589 4355583 AATGATCGGCGCGTC CGGGTCACAC AGG GTGTCACCCG TAGTTACGTCTTTCA TERM 5581 4356864 - 4356839 - R 82 -11.2 -3.63895 | gap 1, opp_overlap 4356829, overlap 4356829 TTTAAGTAGCCCAAA GCGGGCTGCTT GCTGG AAGC-GCCCGC CTGGTGACTAAAATT CKO_04747 4357359 - 4356889 - | 30S ribosomal protein S7 CKO_04748 4357372 - 4357833 + | hypothetical protein TERM 5582 4357900 - 4357878 - T 84 -8.4 -4.7268 | AAACACGTAATAAAA CGGCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG CKO_04749 4358186 - 4357956 - | hypothetical protein CKO_04750 4358610 - 4358251 - | hypothetical protein TERM 5583 4358528 - 4358481 - G 100 -12 -4.7153 | overlap 4358500 AAAGAATCTGAAAAA CGCCGTCGCCGATAAAAAAGAC GCCA GTCTCTTCCGTCAGCGCCGACG TCGCCAGTAACGCAT TERM 5584 4358518 - 4358500 - G 79 -3 -5.24129 | overlap 4358481 GTCGCCGATAAAAAA GACGCCAG TCT CTTCCGTC AGCGCCGACGTCGCC CKO_04751 4358996 - 4358610 - | hypothetical protein TERM 5585 4358694 - 4358713 + g 80 -5.6 -4.89009 | CCCTGGCTGTAAGTT GGCTGATG CCAG CGCCAGCC TTTTTGCTTCGGTCT TERM 5586 4358760 - 4358738 - G 75 -11.2 -3.35679 | CGGTCTCATCCACAA TGCCGCGACG CAG CGCCGCCGCA ACGCAGATATTCAAC CKO_04752 4359718 - 4358996 - | hypothetical protein TERM 5587 4359743 - 4359730 - R 78 -6.7 -4.5787 | opp_overlap 4359740 4359741 TCATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTATGTTT TERM 5588 4359846 - 4359881 + r 86 -3.1 -5.75538 | opp_overlap 4359853, overlap 4359847 4359853 TATCCGGCCTGCAAT AAAAAAACCGCCGCC ATGACA GGCGGCGGTTCTCAG TTTTTATTTTTTAGC TERM 5589 4359853 - 4359874 + r 95 -14.4 -3.5867 | opp_overlap 4359853, overlap 4359847 4359846 CCTGCAATAAAAAAA CCGCCGCC ATGACA GGCGGCGG TTCTCAGTTTTTATT TERM 5590 4359874 - 4359853 - R 100 -14.4 -5.7946 | opp_overlap 4359853 4359847 4359846 CCTGCAATAAAAAAA CCGCCGCC ATGACA GGCGGCGG TTCTCAGTTTTTATT CKO_04753 4360703 - 4359885 - | FKBP-type peptidyl-prolyl cis-trans isomerase CKO_04754 4360936 - 4361154 + | hypothetical protein TERM 5591 4361167 - 4361181 + TF 100 -11.4 -5.24531 | opp_overlap 4361167 TGAGACGTAAAAAAA GCGGGA TAT TCCCGC TTTTTTGTGCCGGAT TERM 5592 4361181 - 4361167 - Tf 100 -11.4 -5.50499 | opp_overlap 4361167 TGAGACGTAAAAAAA GCGGGA TAT TCCCGC TTTTTTGTGCCGGAT CKO_04756 4361854 - 4361267 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 5593 4361828 - 4361839 + Gg 73 -5.8 -4.39989 | overlap 4361812 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT CKO_04755 4361270 - 4361866 + | hypothetical protein CKO_04757 4362149 - 4361949 - | hypothetical protein CKO_04758 4363964 - 4362159 - | glutathione-regulated potassium-efflux system protein KefB CKO_04759 4364518 - 4363964 - | glutathione-regulated potassium-efflux system ancillary protein KefG TERM 5594 4366422 - 4366396 - g 91 -7.3 -5.10208 | gap 1, overlap 4366411 CAAGCGGAAGAAAAA CTGGGCG-ACAG CGAA CTGTACGACCAG AGCCGCAAAGCGGAA CKO_04760 4364644 - 4366545 + | putative ABC transporter ATP-binding protein TERM 5595 4367201 - 4367215 + G 80 -10 -3.92324 | TTTGCCACCTATGCG GGCTTC CAG GAAGCC TTTCATATTGCCGGG CKO_04761 4366556 - 4367494 + | hypothetical protein TERM 5596 4367507 - 4367519 + T 70 -9.1 -3.30124 | overlap 4367487 4367506 TGATCGCCGGATGGC GACGC TGC GCGTC TTATCCGGCCTACGA CKO_04762 4368508 - 4367612 - | hypothetical protein TERM 5597 4367966 - 4367986 + g 76 -10.4 -3.73968 | overlap 4367953 GCAGTGCGACGGCAC GCTCACCG CCAGA CGGTGGGC TTTACTCGCGCCTTT CKO_04763 4369126 - 4368509 - | phosphoribosyl-dephospho-CoA transferase TERM 5598 4368942 - 4368956 + g 71 -8.5 -3.85698 | overlap 4368927 TGAGCCCAGCCCGCC GCGCG CTGGT CGCGC TTTATGCCGCGAACG CKO_04764 4370089 - 4369130 - | hypothetical protein TERM 5599 4370157 - 4370187 + r 82 -11.8 -3.39327 | opp_overlap 4370171 TCAGGATGCAGGTCG CCTCACGGACGC AACGGGC GCGCCCGTGGGG TTATGCATCTGGCAG CKO_04765 4371017 - 4370214 - | hypothetical protein CKO_04766 4371847 - 4371014 - | malonate decarboxylase subunit beta TERM 5600 4371801 - 4371814 + g 88 -9.5 -4.43477 | TCCAGCAGCGCATGG GCGCG CTGA CGCGC TTTTAATTCGATAAA CKO_04767 4372139 - 4371840 - | hypothetical protein CKO_04768 4373006 - 4372149 - | hypothetical protein CKO_04769 4374661 - 4373006 - | hypothetical protein CKO_04770 4374855 - 4374685 - | hypothetical protein CKO_04771 4374911 - 4375933 + | putative hydrolase CKO_04772 4375930 - 4376148 + | hypothetical protein CKO_04773 4376202 - 4377071 + | hypothetical protein CKO_04774 4377214 - 4377038 - | hypothetical protein CKO_04775 4377625 - 4377221 - | hypothetical protein CKO_04776 4377705 - 4377926 + | hypothetical protein TERM 5601 4378531 - 4378501 - g 80 -9 -4.11216 | GGCGTATTCTGAAAA TGCTCGAAGATCAG AAT CTGATCTCCGCTCA CGGTAAGACCATCGT CKO_04777 4377933 - 4378565 + | cAMP-regulatory protein TERM 5602 4378577 - 4378601 + F 100 -17.3 -5.27335 | TTAATCCCGTCGGAA TGGCGCATTAC CGG GTAATGCGCCA TTTTTGTTTGCACCG TERM 5603 4379232 - 4379190 - g 100 -9.1 -4.88067 | gap 1, opp_overlap 4379192, overlap 4379176 4379192 ATCGATCCAGAAAAA GCGCTGCCGCCT-CTGCTGG TGCG CCAGCAGAAAGCGGTAGATC TCATTACCCAGTGTT TERM 5604 4379723 - 4379697 - g 74 -10.9 -3.55761 | gap 1, overlap 4379680 TATTTATCGTTTAAA TCGCCC-GCGCT GCGC AACGCCGGGCGA ATCAGCGTCATGTTA TERM 5605 4380130 - 4380150 + G 70 -6.8 -4.18494 | GGATGGTCTGGCTCT GGCCGC AGTGGCAAA GCGGCC TTTTGCGTAAGAATG CKO_04778 4378617 - 4380704 + | hypothetical protein CKO_04780 4382027 - 4380810 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 5606 4381417 - 4381432 + Gg 72 -11.8 -2.61912 | overlap 4381419 AGAAACGCTGGCGTT GCGGCG GTGA CGCCGC CTTCTCCCTGGATCG CKO_04779 4380711 - 4381862 + | hypothetical protein CKO_04781 4382083 - 4381940 - | hypothetical protein CKO_04782 4382664 - 4382101 - | para-aminobenzoate synthase component II CKO_04783 4383298 - 4382696 - | cell filamentation protein Fic TERM 5607 4382993 - 4383007 + g 76 -5.6 -4.70659 | overlap 4382995 TTCCAGATCCTGCAT CAGGGC GTT GCCCTC TTTTTCGATGTAGGC TERM 5608 4382995 - 4383005 + g 74 -8.2 -3.96999 | overlap 4382993 CCAGATCCTGCATCA GGGC GTT GCCC TCTTTTTCGATGTAG CKO_04784 4383455 - 4383288 - | hypothetical protein TERM 5609 4383555 - 4383528 - R 74 -10.6 -3.17763 | gap 1, overlap 4383529 CGCAGAGGTCAGGAA TC-GCGCGGGC ATTGCTG GCCCGCGCAGA ATGCCATTACGGCAG TERM 5610 4383553 - 4383529 - R 76 -12.1 -2.50443 | overlap 4383528 GCAGAGGTCAGGAAT CGCGCGGGC ATTGCTG GCCCGCGCA GAATGCCATTACGGC CKO_04785 4384134 - 4383562 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 5611 4384314 - 4384302 - H 78 -4.9 -5.0538 | TGTCACGTTAAAAAA TGTAA CGC TTACA GTAATTGCTAATAAA TERM 5612 4384627 - 4384651 + G 71 -5.8 -4.24745 | gap 1 GATGGAAATTATCCC GCTGAAAACGC AGCT GCGTTTT-GGC TTTGTGTTGATGGTG TERM 5613 4384664 - 4384706 + G 83 -8.3 -4.52589 | gap 1, overlap 4384676 GGCTTTGTGTTGATG GTGCT-GGCCGTGGCCGGGC TGAT GCTCAGCCATAGCCTGGCGC TTTTCTCTGCGGCAA CKO_04786 4384415 - 4385596 + | hypothetical protein TERM 5614 4385648 - 4385679 + GT 93 -9.4 -4.7871 | gap 1, opp_overlap 4385657 4385659 ACATGTAACTTGTAG GCCGGAT-AAGACGC ATA GCGTCGCCATCCGGC TTTTTAATCCTGCTT CKO_04788 4385738 - 4385631 - | hypothetical protein CKO_04787 4385604 - 4385729 + | hypothetical protein TERM 5615 4385849 - 4385834 - fH 84 -7.6 -4.87665 | CGTGACTTATAAAAA TGCTGA CAAA TCAGCA ATATACCTCTTAAGG TERM 5616 4386655 - 4386665 + G 73 -5.4 -4.53303 | TAGCGAGCTGGAAGT CGAT TTC ATCG TTTTCTCTACCGGTA CKO_04789 4385954 - 4388497 + | hypothetical protein TERM 5617 4388730 - 4388716 - g 74 -2.1 -5.00884 | gap 1, opp_overlap 4388705 4388724 AGCCCGCTGAAAAAA CAG-CG TTTC CGTCTG AGCGACGGTCTGTGC CKO_04790 4388494 - 4388820 + | nitrite reductase small subunit TERM 5618 4388829 - 4388847 + F 100 -16 -4.6856 | CGGTTGATGAATTTG GGGAGGCG CAA CGCCTCCC TTTTTGACGTCTTTG TERM 5619 4388931 - 4388910 - f 72 -6.5 -4.21194 | opp_overlap 4388926, overlap 4388912 4388914 CGCCATCAGGCAAAA CACACCGCC GGAT GGCGGCATA AATGCCTTATCCGGC TERM 5620 4388927 - 4388914 - f 73 -9.5 -3.43007 | opp_overlap 4388926, overlap 4388912 4388910 ATCAGGCAAAACACA CCGCC GGAT GGCGG CATAAATGCCTTATC TERM 5621 4389054 - 4389033 - f 79 -8.7 -4.21194 | opp_overlap 4389049, overlap 4389035 4389037 CGCCATCAGGCAAAA CATACCGCC GGAT GGCGGCATA AATGCCTTATCCGGC TERM 5622 4389052 - 4389035 - f 76 -9.1 -3.70674 | opp_overlap 4389049, overlap 4389033 4389037 CCATCAGGCAAAACA TACCGCC GGAT GGCGGCA TAAATGCCTTATCCG TERM 5623 4389050 - 4389037 - f 73 -9.5 -3.43007 | opp_overlap 4389049, overlap 4389035 4389033 ATCAGGCAAAACATA CCGCC GGAT GGCGG CATAAATGCCTTATC CKO_04791 4389126 - 4389935 + | nitrite transporter NirC CKO_04792 4389947 - 4391320 + | siroheme synthase TERM 5624 4391353 - 4391325 - f 72 -6.7 -4.30833 | opp_overlap 4391329, overlap 4391327 4391329 CAAACCATTAATAAA TATAGATGCCCTA TAT CAGGGCATCTTTT TTTTAACACTTTAAC TERM 5625 4391351 - 4391327 - f 76 -9.3 -3.74047 | opp_overlap 4391329, overlap 4391325 4391329 AACCATTAATAAATA TAGATGCCCTA TAT CAGGGCATCTT TTTTTTAACACTTTA TERM 5626 4391329 - 4391349 + F 100 -11.2 -5.77853 | opp_overlap 4391329 4391327 4391325 CCATTAATAAATATA GATGCCCT ATATC AGGGCATC TTTTTTTTAACACTT TERM 5627 4391349 - 4391329 - f 82 -11.9 -3.43925 | opp_overlap 4391329, overlap 4391327 4391325 CCATTAATAAATATA GATGCCCTA TAT CAGGGCATC TTTTTTTTAACACTT TERM 5628 4394579 - 4394551 - g 74 -9.5 -3.72893 | overlap 4394577 GATGGCTGCATTAAA CGGCGGCACCGTC GTG AACGACACCACCG GCACCATCAATATTG TERM 5629 4396171 - 4396120 - g 100 -11.7 -4.78107 | overlap 4396159 CACCATGACCAAAAA CGCCTATGCGGATGT-GGCGACGGA GAGT TCCGTCAACGACGTC-GCACAGGCG CTGGACGCCGGGTAT TERM 5630 4396989 - 4396968 - g 93 -12.3 -4.3586 | opp_overlap 4396983 TGAGCTACACGAAAA GCCAGCGTA GCGC CACGCTGGC GGGTGCAAGCGACCA CKO_04793 4391633 - 4397176 + | hypothetical protein TERM 5631 4397191 - 4397222 + F 100 -13.1 -5.64304 | opp_overlap 4397188 4397187 ATTAAATAAACGCCA CGGCCTGGAGA ATATACATCA TCTCCAGGCCG TTTTTTATTATGTTG CKO_04794 4397386 - 4397556 + | hypothetical protein CKO_04795 4397685 - 4397515 - | hypothetical protein TERM 5632 4397609 - 4397579 - G 86 -15.6 -2.78384 | opp_overlap 4397587, overlap 4397587 CGTTGTCGCACGATA CAAAAAAACCGGGG ATT CCCCGGTTTTTTCA TGTGTATCATTGTAG TERM 5633 4397587 - 4397601 + g 100 -12.8 -5.25893 | opp_overlap 4397579 4397587 CACGATACAAAAAAA CCGGGG ATT CCCCGG TTTTTTCATGTGTAT TERM 5634 4397601 - 4397587 - G 100 -12.8 -5.74122 | opp_overlap 4397587, overlap 4397579 CACGATACAAAAAAA CCGGGG ATT CCCCGG TTTTTTCATGTGTAT CKO_04796 4398798 - 4397716 - | hypothetical protein TERM 5635 4398519 - 4398501 - G 73 -8.8 -3.85698 | GCGTTGTGGGATAAA CCGGCGCA TCA TGCACCAG AAGGCGTTGCCCCGG CKO_04797 4400121 - 4398811 - | hypothetical protein TERM 5636 4399710 - 4399697 - G 73 -5.9 -4.43213 | overlap 4399707 GGGAACAGAGCAAAA CCGGC GACA ACCGG GGAACTCAGCTCGCC CKO_04798 4400480 - 4400127 - | hypothetical protein TERM 5637 4400417 - 4400431 + g 87 -2.1 -5.59357 | gap 1 CAAAGCAGCCGGGCG CCA-CG GTCT CGATGG TTTTTTTAATCTGCT CKO_04799 4401369 - 4400491 - | putative hydrolase TERM 5638 4400680 - 4400707 + g 71 -6.3 -4.26076 | gap 1, opp_overlap 4400652 4400675 4400672 GAGCAAACCACGCTG GCGCAGCG-CAT TCAGC ATGTCGATGCGC TTTTCATCCGGGTAG CKO_04800 4402592 - 4401366 - | putative mutase TERM 5639 4401945 - 4401963 + g 76 -11.7 -3.15544 | opp_overlap 4401935 AAAACCGCTCTCATA TGCGCCG GATCG CGGCGCA TTGATGCCAATAAAA CKO_04801 4403755 - 4402592 - | hypothetical protein TERM 5640 4402725 - 4402714 - G 72 -3.6 -4.72007 | GGGTACGAAAACAAA GCAC CACG GCGC TGCTCACCGGAAACG TERM 5641 4402849 - 4402831 - G 75 -5.8 -4.56597 | overlap 4402832 4402834 TTTCCGGCGTAAAAA CGAGCGCG TTG CGCGCATG TCCCCGGCGGTAATA TERM 5642 4402846 - 4402834 - G 71 -10.5 -3.23708 | overlap 4402832 4402831 CCGGCGTAAAAACGA GCGCG TTG CGCGC ATGTCCCCGGCGGTA TERM 5643 4403720 - 4403734 + g 70 -9.2 -3.6806 | opp_overlap 4403719, overlap 4403704 CGCGGCGGTAATCAG CGCCGG ATT CTGGCG TTTCAATGCGTGTAT TERM 5644 4403780 - 4403794 + r 82 -2.9 -5.54264 | opp_overlap 4403789, overlap 4403789 TCGGTTTCTAATCCC TGAAT TAAAT ATTCA TTTTTTTGAATATTT CKO_04802 4404202 - 4403840 - | hypothetical protein CKO_04803 4405131 - 4404223 - | hypothetical protein TERM 5645 4404867 - 4404896 + g 78 -6.4 -4.79955 | opp_overlap 4404864 4404867, overlap 4404859 GCATCGCGCAAACAA CGTTGCTGATGT CCACAT GCGACAGCAACG TTTTGTTATCCATCT TERM 5646 4405079 - 4405104 + g 79 -3.1 -5.17353 | overlap 4405081 4405082 CCAAGCAGGTAGCGG GCCAGGGTCGT CAGC ACGACCCCCTC TTTTTTGATAAATGT CKO_04804 4405146 - 4405277 + | hypothetical protein TERM 5647 4405269 - 4405255 - T 100 -9.2 -5.77988 | opp_overlap 4405255, overlap 4405247 AGAGAGACAAAAAAA CCGGGA AAT CCCCGG TTTTTTAATGTGTGG TERM 5648 4405255 - 4405269 + T 100 -8.5 -5.24989 | opp_overlap 4405247 4405255 AGAGAGACAAAAAAA CCGGG AAATC CCCGG TTTTTTAATGTGTGG TERM 5649 4405309 - 4405339 + T 86 -11.9 -3.50393 | opp_overlap 4405336, overlap 4405310 ACTGTAGGCCCTCGC CGTGTTTACGCCG GGTGG CGGCGTAAACGCC TTATCTGGCCTACGG TERM 5650 4405310 - 4405338 + T 90 -15.4 -2.70022 | opp_overlap 4405336, overlap 4405309 CTGTAGGCCCTCGCC GTGTTTACGCCG GGTGG CGGCGTAAACGC CTTATCTGGCCTACG CKO_04805 4406370 - 4405366 - | tryptophanyl-tRNA synthetase CKO_04806 4407121 - 4406363 - | phosphoglycolate phosphatase TERM 5651 4406571 - 4406621 + g 90 -5.4 -5.18726 | overlap 4406573 AAGAGCATCTGTTCA GGCGCGACGCCCATCCGCT-TTGC CACCA GCAGCAGCGGATCGG-GATGCGGC TTTTTGTTCTGCACA CKO_04807 4407791 - 4407114 - | ribulose-phosphate 3-epimerase TERM 5652 4407796 - 4407808 + r 78 -6.3 -4.61482 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTTTCGCAGG CKO_04808 4408645 - 4407809 - | DNA adenine methylase TERM 5653 4408529 - 4408508 - G 100 -13.1 -4.60977 | overlap 4408523 AATATAACGAGAAAA GTCGGTGTT AAGA AACACCGAC CCGGCACCCACAAAG TERM 5654 4408615 - 4408594 - G 83 -13 -3.16564 | GTTTGATGTCATCAA GCAGGGGG TATTTC CCCCCTGC CCACTTCAGAAAAGC CKO_04809 4410010 - 4408718 - | hypothetical protein CKO_04810 4410174 - 4410037 - | hypothetical protein CKO_04811 4411195 - 4410107 - | 3-dehydroquinate synthase TERM 5655 4411141 - 4411119 - GR 88 -12.8 -3.53712 | overlap 4411115 4411137 AGCGGTAAGAATGAA GCTGGTTCGT TAA ACAAACCAGC CGCGATGGTGATAGG CKO_04812 4411775 - 4411254 - | shikimate kinase I TERM 5656 4411564 - 4411580 + g 74 -2.2 -5.07486 | overlap 4411563 4411565 ATACCCTGTTTTTCC GTCAAC TCGTT GATGAC TTTTTCTTCGCGATC CKO_04813 4411948 - 4411802 - | hypothetical protein CKO_04814 4413322 - 4412084 - | outer membrane porin HofQ TERM 5657 4412225 - 4412262 + gr 80 -9.1 -4.13945 | gap 1, opp_overlap 4412234 4412236 AGCGGATTTGTTCTT GC-GCGAAAAGATGCCGC CCA GCGCCAGCGTTTCGCCGC TTTTAACCTCGACCT TERM 5658 4412996 - 4413023 + gr 80 -6.9 -4.67038 | gap 1, overlap 4412997 4412999 GTTGGCCCGAAGCCT TGCCTGCTCGGC CTCCT GCCGCGC-GGCG TTTTCGTTTTGCCAG TERM 5659 4413079 - 4413093 + gr 74 -2.7 -4.84761 | TCCCCTCCTGGCGCA GCACC AGCCC GGCGC TTTTTATGACCGTCT CKO_04815 4413635 - 4413234 - | hypothetical protein CKO_04816 4414098 - 4413628 - | hypothetical protein CKO_04817 4414549 - 4414082 - | hypothetical protein TERM 5660 4414427 - 4414444 + g 85 -6.9 -4.85599 | overlap 4414429 GGGTTGGATCGCCAG CAGCGCG GCGG CGCGCTC TTTTTCTGCGATCGA TERM 5661 4414429 - 4414442 + g 80 -9.5 -4.05067 | overlap 4414427 GTTGGATCGCCAGCA GCGCG GCGG CGCGC TCTTTTTCTGCGATC CKO_04818 4415400 - 4414621 - | hypothetical protein TERM 5662 4414890 - 4414873 - G 71 -11.3 -2.89683 | ACGCCAGGCCAGACA CTGCTGG TGCG CCAGCAG ATAAGGAATAAAGCG TERM 5663 4414916 - 4414903 - G 70 -5.2 -4.38203 | opp_overlap 4414915 CAGATAAGGAATAAA GCGC TGTAAT GCGC AGGCATCCGGCGTAA TERM 5664 4416541 - 4416527 - g 100 -4.2 -5.88565 | GGGACAACAAAAAAA TCACCG ACA CGCTGA AAGCCCTGCCAACCT CKO_04819 4415497 - 4418073 + | peptidoglycan synthetase TERM 5665 4418142 - 4418101 - T 95 -14.6 -3.55444 | opp_overlap 4418090 4418079 TGGCGACGCCTGAAA CGTCTTATCCGGCCTACA TTTTGT TGTAGGCCAGGTAAAACG TCAGCCGCCATCCGG CKO_04820 4418727 - 4418167 - | ADP-ribose diphosphatase NudE TERM 5666 4418783 - 4418800 + H 90 -9.9 -4.54343 | TATACAGCACGGTTT CGGCAAT GTGA ATTGCCG TTTATTTACATTTAT TERM 5667 4420988 - 4421001 + G 71 -8.1 -3.87994 | GGCCTGCACCGCATC CCGGA TCGT TCCGG TTTATGGCGCTACCT CKO_04821 4419050 - 4421182 + | hypothetical protein TERM 5668 4421242 - 4421224 - f 95 -11.7 -4.10657 | opp_overlap 4421222 GCATATCCGGCAAAA GCCGCCA GGATT TGGCGGC AATCTCATCTGGAGA CKO_04822 4421264 - 4421932 + | hypothetical protein TERM 5669 4421969 - 4421954 - g 77 -4.6 -4.93877 | overlap 4421956 CGCCATGAAAGAAAA GCCCTC TGTT GAGGTC CGACTGGATAAATGG CKO_04823 4421943 - 4422344 + | ribosome-associated heat shock protein Hsp15 CKO_04824 4422363 - 4423247 + | Hsp33-like chaperonin TERM 5670 4423286 - 4423261 - f 100 -14.1 -4.7871 | gap 1, opp_overlap 4423261 4423255 AATCACCAGTAAAAA GCCTGATG-GCG AAT CGCTCATCAGGC TTACTCATTTACAGG TERM 5671 4423261 - 4423286 + F 90 -14.1 -3.32769 | gap 1, opp_overlap 4423261, overlap 4423255 AATCACCAGTAAAAA GCCTGATG-GCG AAT CGCTCATCAGGC TTACTCATTTACAGG TERM 5672 4424141 - 4424111 - g 75 -6.3 -4.57569 | gap 2, opp_overlap 4424111, overlap 4424114 GCATTTTGTCAAAAA CATGTTCATCCGTCC TGC GGACGAA-GAAC-TG GTGGATTTCAAACCA TERM 5673 4425202 - 4425189 - g 72 -3.8 -4.72986 | overlap 4425176 4425191 4425193 CAGTGGCAGGAAAAA GCCA CCGCGC TGGC GAAACTGTTTGTCGA CKO_04825 4423665 - 4425284 + | phosphoenolpyruvate carboxykinase TERM 5674 4425380 - 4425408 + T 82 -11.8 -3.45602 | opp_overlap 4425385, overlap 4425385 CGGGCGCTGAGAAAT AAAAAGGGAGGC ATTTC GCCTCCCTTTTC TTATGCGTCTTTCGT TERM 5675 4425385 - 4425403 + T 100 -11.7 -4.79955 | opp_overlap 4425385, overlap 4425380 GCTGAGAAATAAAAA GGGAGGC ATTTC GCCTCCC TTTTCTTATGCGTCT TERM 5676 4425403 - 4425385 - T 100 -12.4 -5.38054 | opp_overlap 4425385 4425380 GCTGAGAAATAAAAA GGGAGGCA TTT CGCCTCCC TTTTCTTATGCGTCT CKO_04826 4426761 - 4425409 - | osmolarity sensor protein TERM 5677 4425597 - 4425625 + g 71 -10.4 -3.18264 | gap 1, opp_overlap 4425596 CGCCACGCACAAACG GCTGGAACAG-GT GCTT ACGCTGTTCCGGC TTAATGCCTGGCCCA TERM 5678 4426706 - 4426674 - G 72 -12 -2.73443 | overlap 4426673 GCACCACCAGATAAG TCGTCACCAGGCTG ACGAA CAGCAAGGTGACGA TGAGCAGTAGCGTGC CKO_04827 4427630 - 4426758 - | osmolarity response regulator CKO_04828 4427704 - 4428177 + | transcription elongation factor GreB TERM 5679 4428619 - 4428599 - g 73 -8.9 -3.86015 | TACCTGCCCTACAAA CCCAAGCGT CGC ACGCGCGGG CAAATCGCCATCGAA TERM 5680 4430169 - 4430147 - g 78 -6.8 -4.62904 | overlap 4430148 AAAGAGCTGGAAAAA CCGGGCCGCG ACC CGCGTCCAGA GTTCAAAACCGCGCA TERM 5681 4430528 - 4430516 - g 86 -10.5 -4.07568 | CGCCCGGCGGCAAAA GCGGC GAA GCCGC GTGGTCGTGATGCGC CKO_04829 4428275 - 4430605 + | hypothetical protein TERM 5682 4430623 - 4430657 + F 77 -9.3 -3.84017 | gap 1, overlap 4430624 AAGCCTTATGCTTGT AGGCCGGAT-GAGGTA TCTA TACCGCCATCCGGCCG TTATATTTGAAATTA TERM 5683 4430624 - 4430656 + F 79 -12.8 -2.89687 | gap 1, overlap 4430623 AGCCTTATGCTTGTA GGCCGGAT-GAGGTA TCTA TACCGCCATCCGGCC GTTATATTTGAAATT CKO_04830 4431031 - 4431258 + | ferrous iron transport protein A TERM 5684 4431300 - 4431286 - g 89 -2.8 -5.56112 | opp_overlap 4431286, overlap 4431293 ATAAAAATGAAAAAA TTAACC ATT GGTTTA ATTGGTAATCCAAAT TERM 5685 4432124 - 4432135 + G 73 -5.8 -4.44797 | TCCTGAACCGTTTCC TCGG GTTG CCGA TTTTCCTGTTCGTCA TERM 5686 4432349 - 4432322 - g 72 -11.2 -3.13403 | opp_overlap 4432311 4432320, overlap 4432320 GCGGCGGTATCAATA CCGTTCTGCCGC TGGT GCCGCAGATCGG CATGATGTACCTGTT TERM 5687 4432787 - 4432772 - g 74 -6.8 -4.34402 | TGCCGCACATCAAAA GCCTGG TGAT CCAGAC CTGGCAACGCCTGAA TERM 5688 4432907 - 4432889 - g 87 -8.2 -4.62069 | CCCTGAGCGGAAAAA TCGTCGAT AAC ATCAACGA CTCTGCGCTCGCGTC TERM 5689 4433581 - 4433552 - g 86 -10.7 -4.11216 | gap 1 TGGCGACGCGTAAAA CGGCCAGCGCCTGC TGC GCAAGCCCT-GCCG GTAACTGTCACTAAG CKO_04831 4431277 - 4433595 + | ferrous iron transport protein B CKO_04832 4433607 - 4433843 + | hypothetical protein CKO_04834 4434697 - 4433927 - | hypothetical protein TERM 5690 4433981 - 4433966 - Gf 70 -4.7 -4.386 | CAACGCCTGACAAAA TTCGC CGGGAT GCGAA ATAAACGGCGCATGG TERM 5691 4434833 - 4434819 - gH 79 -12.8 -2.78384 | TCGGTTTGCACGAGA GCGGCG CGT CGCCGC GTCAGCCTGTGCCCG CKO_04833 4434687 - 4435418 + | gluconate periplasmic binding protein TERM 5692 4435584 - 4435597 + G 73 -5.9 -4.51812 | TCCCGGTACGCCTAA CGCTG AATG CGGCG TTTCTTATTGTCCGC CKO_04835 4435477 - 4436052 + | putative DNA uptake protein TERM 5693 4437298 - 4437334 + G 74 -10.7 -3.54741 | opp_overlap 4437294 4437295 4437298 CTCAATCAAAATCAT CGCGATGATGCTGCTGA TCA TCGGCGGCGGCGGCGCG TTTAAGCAGGTACTG CKO_04836 4436402 - 4437718 + | hypothetical protein TERM 5694 4437790 - 4437750 - T 72 -8.4 -3.80625 | opp_overlap 4437745, overlap 4437745 4437751 4437778 GCCGGATAAGGCAAA GCCGCCATCCGGCAA-TGTG CGC CAGAATTGCCTGATGGCG-C TGCGCTTATCAGGCC TERM 5695 4437844 - 4437828 - T 100 -13.7 -5.31275 | opp_overlap 4437828 TGTCACCATAAAAAA GCCGGGA ATT TCCCGGC TTTTTTTACTTCTTC TERM 5696 4437828 - 4437844 + T 100 -13.7 -5.71638 | opp_overlap 4437828 TGTCACCATAAAAAA GCCGGGA ATT TCCCGGC TTTTTTTACTTCTTC CKO_04837 4439937 - 4437850 - | 4-alpha-glucanotransferase TERM 5697 4439799 - 4439835 + g 74 -8.5 -4.05788 | opp_overlap 4439826 4439831, overlap 4439826 4439827 CCGCCACCTTCGTGG CGGCGGTGGCGCGGTGC ATC GCATCAAGCAAACGCCG TTTGGTTTCGGCGCC CKO_04838 4442340 - 4439947 - | hypothetical protein TERM 5698 4440808 - 4440828 + g 73 -9 -3.83502 | opp_overlap 4440803, overlap 4440803 TTTCACAAATTCGGC CAGGCGGA CTTTA TTCGCCTG TTTAATCTCACGATA TERM 5699 4441181 - 4441197 + g 70 -6.6 -4.1552 | TGCTTATCGCCCGGC CAGGTT TTATC AACCTG TTTCTTAAAGCGGTC TERM 5700 4441524 - 4441540 + g 73 -5.1 -4.66609 | opp_overlap 4441522 4441523, overlap 4441522 CGCACTGGAAATACT GCTGC ATCAGGC GCAGC TTTTTGCCTGCGGTG CKO_04839 4442490 - 4442663 + | hypothetical protein TERM 5701 4445210 - 4445192 - g 71 -4.4 -4.65895 | opp_overlap 4445195, overlap 4445195 GGCCGGACGTAAAAA CGACGCCC AGC GGGTGTTG CTTGATGCGCTGCAA CKO_04840 4442958 - 4445663 + | transcriptional regulator MalT CKO_04841 4446466 - 4445708 - | DNA-binding transcriptional repressor GlpR TERM 5702 4446505 - 4446554 + r 86 -11.6 -3.53811 | opp_overlap 4446551, overlap 4446485 4446546 4446549 GATGACGACGCCTGG CGTTTTATCCGGCCTACCGA CCGTGCATTT TTAGTAGGCCGGATAAGGCG TTTCGCCGCCATCCG TERM 5703 4446579 - 4446551 - R 77 -10.2 -3.30441 | opp_overlap 4446505 4446549 4446546 TAGTAGGCCGGATAA GGCGTTTCGCCG CCATC CGGCGCAACCCC AATCATGTTCGTTTT CKO_04842 4447412 - 4446582 - | intramembrane serine protease GlpG TERM 5704 4447273 - 4447251 - G 73 -9 -3.86897 | overlap 4447226 4447225 GGGATTTTCCAGAAA GCGCGCCAGC TCC GCCCGCACGC GCTCGGCCTGAGATT CKO_04844 4447814 - 4447488 - | thiosulfate sulfurtransferase CKO_04843 4447725 - 4447976 + | hypothetical protein TERM 5705 4448369 - 4448381 + GFH 77 -9.1 -3.92659 | opp_overlap 4448360 4448357 AACGCACCAGTCTGC CCGGT TCA ACCGG TTTGCGTTTTGGCGC TERM 5706 4448726 - 4448707 - gfH 72 -8.6 -3.72695 | gap 1 ATTCGTCTGATCAAA GGCAGCCAC ATT GTGG-TGCC GCGCGTGCATACGCA TERM 5707 4449054 - 4449042 - gfH 74 -6.9 -4.3129 | opp_overlap 4449041 TATCCACGATGAAAA CGGCA AAG CGCCG CTGCTGTCGGTATTC CKO_04845 4448017 - 4449525 + | glycerol-3-phosphate dehydrogenase TERM 5708 4449615 - 4449569 - gT 84 -9.3 -4.37092 | gap 1, opp_overlap 4449578 4449588 4449589, overlap 4449571 ATCCGGCCTACAAAA CAGTCCACAGGCCCGGTAAGCG TCAG CGCC-ACCGGGCCTTTTGCCGG ATGGCGACTAACGTC TERM 5709 4449613 - 4449571 - gT 83 -10.5 -3.79419 | gap 1, opp_overlap 4449578 4449588 4449589, overlap 4449569 CCGGCCTACAAAACA GTCCACAGGCCCGGTAAGCG TCAG CGCC-ACCGGGCCTTTTGCC GGATGGCGACTAACG TERM 5710 4449578 - 4449606 + GT 95 -12.4 -4.09685 | gap 1, opp_overlap 4449571 4449569, overlap 4449588 4449589 ACAAAACAGTCCACA GGCCCGGTAAGCG TCAG CGCC-ACCGGGCC TTTTGCCGGATGGCG CKO_04846 4449494 - 4449649 + | hypothetical protein CKO_04847 4452109 - 4449662 - | hypothetical protein TERM 5711 4449923 - 4449961 + g 81 -6.6 -4.78107 | opp_overlap 4449919, overlap 4449925 4449927 CGGGCTGAACACGCC GCTGCCGATCTGCGTCAG CAC CTGGTGCAGCTCCGTATC TTTTTCGTAATACTC TERM 5712 4449925 - 4449959 + g 71 -7.8 -4.00443 | opp_overlap 4449919, overlap 4449923 4449927 GGCTGAACACGCCGC TGCCGATCTGCGTCAG CAC CTGGTGCAGCTCCGTA TCTTTTTCGTAATAC TERM 5713 4450508 - 4450534 + g 100 -3.7 -5.79595 | gap 1, overlap 4450510 GACCACCACGTTCAA CTGCTGAGCGAT GAGT ATTGC-CAGCCG TTTTTTGTTTTCCAG TERM 5714 4450700 - 4450712 + g 71 -10.5 -3.18681 | opp_overlap 4450670 CGCCAGCCAGCGGCG CGGCG TCA CGCCG TTGGTCACGTTGCAG CKO_04848 4453562 - 4452129 - | glycogen synthase CKO_04849 4454878 - 4453562 - | glucose-1-phosphate adenylyltransferase TERM 5715 4454257 - 4454272 + g 87 -8.2 -4.57073 | CGTCGCCAGGCATGG CTGGCG GATT CGCCGG TTTTTCAACAAACTC CKO_04850 4456848 - 4454875 - | glycogen debranching enzyme TERM 5716 4456790 - 4456776 - G 80 -4.2 -5.0133 | CATGCGCCGAAAAAA GCGTGA AGT TGACGC CATGACCGTCATACG CKO_04851 4459031 - 4456845 - | glycogen branching enzyme TERM 5717 4457422 - 4457432 + g 82 -5.4 -5.0538 | TCGCCAGGCATACGG TCGA GAA TCGA TTTTTTGCCATGCAC TERM 5718 4459283 - 4459268 - RH 91 -6.1 -5.48825 | TATTACGCAAAAAAA GGGTG ACTCAG CACCC AACATTTAAACTCTG CKO_04853 4460498 - 4459392 - | aspartate-semialdehyde dehydrogenase TERM 5719 4460462 - 4460421 - GH 70 -9.5 -3.07994 | gap 1 GCGAATGGCATCGAA GTCGCGCTCTTCAACCATGC GTT GCATGAGTACAGAGC-CGAC CATACCGCGCCAGCC CKO_04852 4460442 - 4460648 + | hypothetical protein CKO_04854 4460690 - 4461283 + | putative eubacterial dITP- and XTP- hydrolyzing enzyme TERM 5720 4461322 - 4461296 - T 100 -10.1 -5.1101 | gap 1 TGAGGATGTAAAAAA GCCGGGT-GGCG CTTG CGCTTACCCGGC CTACGGTGTGGATAT CKO_04855 4462663 - 4461386 - | low affinity gluconate transporter TERM 5721 4462666 - 4462635 - G 73 -9.4 -3.81287 | opp_overlap 4462643, overlap 4462640 GACACCACCATCAAA GCAACGAAGGCGTG CATA CGCGCCTTCATCAC TAAAAACAGCAGCAG TERM 5722 4462701 - 4462673 - R 71 -3.9 -4.77036 | overlap 4462675 4462676 CTTCATCACTAAAAA CAGCAGCAG TAAAACAGAAC CTACTGCTG TTAAAACAAGCGTTA CKO_04856 4463217 - 4462726 - | gluconate kinase 1 CKO_04857 4464445 - 4463396 - | hypothetical protein TERM 5723 4464579 - 4464600 + r 82 -13.1 -3.05384 | GAAGGTTGCCTCTGG TGAGGGACA AGGA TGTCCCTCA TTAAATCCCCGGAAG TERM 5724 4464640 - 4464606 - R 86 -11.3 -3.72695 | overlap 4464607 ATGTCCCTCATTAAA TCCCCGGAAGCGTAC ATCAA GTACGCGACCGGGGT AAGCCAGGAAGCCAA TERM 5725 4464639 - 4464607 - R 87 -14.8 -2.83403 | overlap 4464606 TGTCCCTCATTAAAT CCCCGGAAGCGTAC ATCAA GTACGCGACCGGGG TAAGCCAGGAAGCCA CKO_04858 4465383 - 4464688 - | hypothetical protein CKO_04859 4466665 - 4465508 - | putative dehydrogenase TERM 5726 4466874 - 4466858 - H 100 -9.4 -6.09133 | CAGCTCAAAAAAAAA GCCAGC ACCCG GCTGGC TAAAGTAATACTGGA CKO_04861 4467066 - 4467554 + | putative acetyltransferase YhhY CKO_04862 4467736 - 4469016 + | hypothetical protein CKO_04863 4469018 - 4469275 + | hypothetical protein CKO_04865 4469496 - 4469314 - | hypothetical protein CKO_04864 4469366 - 4469593 + | hypothetical protein CKO_04866 4469616 - 4469876 + | hypothetical protein TERM 5727 4469955 - 4469934 - gT 85 -12.3 -3.30338 | AGAACTCCCTGATAA GCCCCCTTC CACC GAAGAGGGC CACTTACCTCAATAT CKO_04868 4471775 - 4469964 - | gamma-glutamyltranspeptidase periplasmic precursor CKO_04867 4469882 - 4470040 + | hypothetical protein TERM 5728 4470115 - 4470126 + gF 74 -7.2 -4.07568 | AGTTTCAGCGTATCC GGGC TAAA GCCC TTTTCCACGCGCAGC TERM 5729 4470489 - 4470509 + gF 87 -11.1 -3.85698 | GTTCAGGGTGTAGGT GACGGCCAC CGC GTTGCCGTC TTTATCCACCACCGA TERM 5730 4471013 - 4471029 + gF 72 -3.6 -4.82901 | TCTCAGCAATCATCT CCAGAC TTTTC GTCAGG TTTTTCTGCACCAGC TERM 5731 4471212 - 4471224 + gF 72 -9.1 -3.51934 | overlap 4471210 TATCACTTTGTTGAG CGGCA GGG TGCCG TATTTCTCCAGCGCC TERM 5732 4471448 - 4471417 - Gf 72 -5.6 -4.4891 | overlap 4471418 4471419 CGCAGCAGCATAAAA CCCCCGCCGCCGAG GTTC CCCGCCTGCGGATG CGTCACCGCCAGCGC CKO_04869 4471830 - 4472210 + | hypothetical protein CKO_04870 4472940 - 4472191 - | cytoplasmic glycerophosphodiester phosphodiesterase TERM 5733 4472258 - 4472289 + g 100 -14.4 -4.17556 | gap 1 CAGATGCAGTCCACG CCCCAGCGCAGCAGT TCC GCCGC-GCGCTGGGG TTTGTTGACGGTGTA CKO_04871 4474007 - 4472937 - | glycerol-3-phosphate transporter ATP-binding subunit CKO_04872 4474861 - 4474016 - | glycerol-3-phosphate transporter membrane protein TERM 5734 4474320 - 4474304 - G 83 -7.9 -4.57341 | opp_overlap 4474317 AATGTCGCGGAAAAA GCGCATC GGT GAAGCGC CGTCGATGCGCGCCG CKO_04873 4475700 - 4474858 - | glycerol-3-phosphate transporter permease TERM 5735 4475681 - 4475667 - G 77 -3.5 -5.05113 | overlap 4475670 GCCAGATAAAGAAAA TGACG GTGAT CGCCA GTTGCGGCGCAACCA CKO_04874 4477066 - 4475846 - | glycerol-3-phosphate transporter periplasmic binding protein TERM 5736 4477191 - 4477204 + r 70 -5.2 -4.46212 | opp_overlap 4477201, overlap 4477190 TTGTTGTGCCGGATG CGCG ATATCA CGCG TTTTATGCTCGCGAG TERM 5737 4477263 - 4477250 - R 74 -3.9 -5.04175 | CGAATGACAGAAAAA TAACT TTTT AGTTA CAAATAAATGACAGC CKO_04875 4477415 - 4477257 - | hypothetical protein TERM 5738 4477369 - 4477342 - G 100 -9.9 -5.47159 | gap 2 TGGAAGAAACAAAAA GCCGGGT--GGCG GCTT CGCCTTACCCGGC CTACAGGATCGAGTA CKO_04876 4478154 - 4477423 - | leucine/isoleucine/valine transporter ATP-binding subunit CKO_04877 4478921 - 4478154 - | leucine/isoleucine/valine transporter ATP-binding subunit CKO_04878 4480195 - 4478918 - | leucine/isoleucine/valine transporter permease subunit TERM 5739 4479696 - 4479659 - G 74 -11.2 -3.22223 | overlap 4479679 GAAGCCGAGCAGGAA GCCCGCCGCCGCCG CAACCAGCCC CGCCAGCGGCAGGC AGGTCCAGAACCCCA CKO_04879 4481118 - 4480192 - | branched-chain amino acid transporter permease subunit LivH CKO_04880 4482289 - 4481180 - | hypothetical protein CKO_04881 4482423 - 4482584 + | hypothetical protein CKO_04882 4482826 - 4483218 + | hypothetical protein TERM 5740 4483252 - 4483226 - T 100 -8.7 -5.4756 | gap 1 AACGGTAATAAAAAA GCCGGAT-GGCG CTAA CGCTTATCCGGC CTACGTGTTTCGCAA CKO_04883 4484437 - 4483319 - | hypothetical protein TERM 5741 4484611 - 4484599 - R 70 -4.7 -4.47328 | opp_overlap 4484603 4484604 4484604, overlap 4484600 4484601 AAGTTGATGACAAAA CGGGG CGC CGCCG CAACGGGCGGCGTCG TERM 5742 4484603 - 4484627 + r 76 -8.4 -4.0162 | opp_overlap 4484599 4484600 4484601, overlap 4484604 4484604 TGATGACAAAACGGG GCGCCGCCGC AACGG GCGGCGTCGG TTTATCGTGTCAGCG TERM 5743 4484604 - 4484626 + r 78 -11.9 -3.00651 | opp_overlap 4484599 4484600 4484601, overlap 4484603 4484604 GATGACAAAACGGGG CGCCGCCGC AACGG GCGGCGTCG GTTTATCGTGTCAGC TERM 5744 4484604 - 4484623 + r 76 -12.1 -2.72866 | opp_overlap 4484599 4484600 4484601, overlap 4484604 4484603 GATGACAAAACGGGG CGCCGCC GCAACG GGCGGCG TCGGTTTATCGTGTC CKO_04884 4485894 - 4484629 - | 4-aminobutyrate aminotransferase CKO_04885 4486108 - 4485884 - | hypothetical protein TERM 5745 4486077 - 4486096 + g 83 -7.8 -4.58283 | opp_overlap 4486077 CTGTAAAACAAAAAA CCCCGGAT TCTC ATCCAGGG TTTTTCGGGCACTTC TERM 5746 4486096 - 4486077 - G 100 -10 -5.79595 | opp_overlap 4486077 CTGTAAAACAAAAAA CCCCGGAT TCTC ATCCAGGG TTTTTCGGGCACTTC CKO_04887 4486973 - 4486119 - | RNA polymerase factor sigma-32 CKO_04888 4487094 - 4486984 - | hypothetical protein CKO_04886 4486956 - 4487051 + | hypothetical protein TERM 5747 4487159 - 4487146 - TR 73 -2.3 -5.14965 | ACCGCTATGAAAAAA CACTG TGGG CAGGG GATGAGATGTTTTGA TERM 5748 4487168 - 4487225 + Tr 72 -4.9 -4.71426 | gap 1, overlap 4487167 GGCAGGGGATGAGAT GTTTTG-ATGCTCTTTCCCTGCGAACGG GAA CTCATTGCAGGGAAAGAGTATACCACGC TTTTATTAATCGGGA CKO_04889 4488304 - 4487231 - | cell division protein FtsX CKO_04890 4488950 - 4488282 - | cell division protein FtsE CKO_04891 4490455 - 4488953 - | cell division protein FtsY TERM 5749 4489125 - 4489161 + gr 73 -10.1 -3.38291 | GTCAGGGTGATACCG GTCAGGCCAACCGCTTC ATG GAACAGTTTGGCCTGGC TTATCGCATTCTGCC CKO_04892 4490532 - 4490347 - | hypothetical protein CKO_04893 4490592 - 4491188 + | 16S rRNA m(2)G966-methyltransferase CKO_04894 4491178 - 4491447 + | hypothetical protein CKO_04896 4491898 - 4491536 - | hypothetical protein TERM 5750 4491727 - 4491743 + gF 74 -7.9 -4.16921 | overlap 4491695 4491722 GCTGCTGACGCGAGC GCCGCTC GTT GATCGGC TTTTCGCGCTTATTG CKO_04895 4491776 - 4492018 + | hypothetical protein CKO_04897 4492037 - 4492663 + | hypothetical protein TERM 5751 4492674 - 4492693 + F 80 -12.2 -2.95223 | opp_overlap 4492668 4492667, overlap 4492688 TTTAATAACGCTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTCCGGTTA TERM 5752 4492694 - 4492740 + F 75 -11.1 -3.01924 | gap 1, opp_overlap 4492668 4492667, overlap 4492688 GAGTCGACTCCAGAG TG-TATCCTCCGGTTAATGAGA AAAT TATCATCAACCGGAGGATGCCA TGTTGACACCCGATA TERM 5753 4493761 - 4493773 + G 71 -4.7 -4.64334 | opp_overlap 4493745 CTGAAGAACGCCGCG CGCCC ATT GAGCG TTTTATTGACCGCTT CKO_04898 4492740 - 4494938 + | zinc/cadmium/mercury/lead-transporting ATPase CKO_04899 4496012 - 4495029 - | hypothetical protein CKO_04900 4496434 - 4496189 - | cell developmental protein SirA CKO_04901 4496605 - 4497270 + | hypothetical protein CKO_04902 4497301 - 4497900 + | hypothetical protein TERM 5754 4497945 - 4497918 - T 100 -18.4 -2.86432 | opp_overlap 4497918, overlap 4497910 GTTAAGACGATGACA CGGCCTCCTGCG ATAC CGCCGGAGGCCG TTTTTTTAACCGCCA TERM 5755 4497918 - 4497945 + T 100 -18.4 -5.40072 | opp_overlap 4497918 4497910 GTTAAGACGATGACA CGGCCTCCTGCG ATAC CGCCGGAGGCCG TTTTTTTAACCGCCA CKO_04903 4499121 - 4497904 - | hypothetical protein CKO_04904 4499253 - 4500302 + | hypothetical protein TERM 5756 4500312 - 4500327 + TF 78 -4.7 -4.96848 | GGATAATTAATTTAC CTACC AACCAG GGTAG TTTTTATCTACGCAC CKO_04906 4500480 - 4500385 - | hypothetical protein CKO_04905 4500360 - 4500452 + | hypothetical protein CKO_04907 4500615 - 4501004 + | hypothetical protein CKO_04908 4501156 - 4502217 + | hypothetical protein TERM 5757 4502245 - 4502218 - f 74 -3.5 -4.94109 | gap 1, opp_overlap 4502222, overlap 4502222 CAAAAGAAAAAATAA CAAAGTGACGTT AAAAA AACGTCAC-TGG TATCACCGGATTACC TERM 5758 4502242 - 4502222 - f 100 -9.8 -4.86216 | opp_overlap 4502222, overlap 4502218 AGAAAAAATAACAAA GTGACGTT AAAAA AACGTCAC TGGTATCACCGGATT CKO_04909 4502275 - 4502997 + | hypothetical protein TERM 5759 4503033 - 4503046 + G 93 -4.5 -5.46706 | GATTGGGCATGGCGA CTGGT GATG ACCGG TTTTTGTTTTGCCCT TERM 5760 4503555 - 4503511 - g 76 -2.7 -5.0133 | gap 1, opp_overlap 4503513 4503514, overlap 4503512 4503514 4503538 GACCCGGTGAAAAAA TGACGCTGCAACGCGGCG CGGCCAATAT CGCCGTGC-GCTGCGGCA GCGATTTACGCGTAG CKO_04910 4502982 - 4503809 + | hypothetical protein CKO_04911 4503787 - 4504047 + | hypothetical protein CKO_04912 4504060 - 4504311 + | acyl carrier protein TERM 5761 4504373 - 4504383 + G 85 -6.8 -4.85177 | CCGGCCTGATGCTGC TGGC CTG GCCA TTTTTGATCTGGTTT CKO_04913 4504339 - 4504899 + | hypothetical protein CKO_04914 4504896 - 4506257 + | hypothetical protein CKO_04915 4506244 - 4506597 + | hypothetical protein CKO_04916 4506588 - 4508279 + | hypothetical protein TERM 5762 4508592 - 4508552 - g 77 -7.6 -4.35461 | TGAAGAGTACGAAAA CCGCCTGCGCATCG GCTACGAAATTTT TGATGCGCAGACGG GAAAACGCGCCACGA CKO_04917 4508283 - 4508705 + | hypothetical protein CKO_04918 4508702 - 4509307 + | hypothetical protein TERM 5763 4509985 - 4509973 - gf 72 -2.6 -4.87893 | opp_overlap 4509983 AAGGTGAACTAAAAA CGCG TTATC CGCA GGCGCAGCTGCTGTC TERM 5764 4510699 - 4510689 - gf 74 -4.6 -4.72272 | overlap 4510690 4510691 4510693 CTGGCGCAGGAAAAA GCGA TCA CCGC CCTGACCGGGCAGAG TERM 5765 4510904 - 4510892 - gf 100 -10.5 -4.68424 | overlap 4510894 GAAGCTACTGAAAAA CGCCG CTC CGGCG GTGAACCGCGCGCTA CKO_04919 4509276 - 4511600 + | hypothetical protein CKO_04920 4511597 - 4512274 + | hypothetical protein TERM 5766 4512653 - 4512629 - g 74 -10.7 -3.61103 | CAACCTGACGCTAAA CGGCCAGGAAA GCC TCTCCTGGCAG TACCCGCAGCAGGAG CKO_04921 4512276 - 4513445 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 5767 4513521 - 4513576 + G 88 -11.6 -4.15044 | gap 1, opp_overlap 4513507, overlap 4513521 ACGTCGAGTGCGTCA C-GGACGAGTCCGCCGCCTGCCGCGTC ACC GTGGCGCCAGGCGGCGTGCTGGCCCCG TTTCTTGACCCGCAG TERM 5768 4513521 - 4513575 + G 76 -11.8 -3.08812 | opp_overlap 4513507, overlap 4513521 ACGTCGAGTGCGTCA CGGACGAGTCCGCCGCCTGCCGCGTC ACC GTGGCGCCAGGCGGCGTGCTGGCCCC GTTTCTTGACCCGCA CKO_04922 4513442 - 4513918 + | hypothetical protein TERM 5769 4513963 - 4513992 + G 77 -7.7 -4.31835 | opp_overlap 4513951 AAAGGCATCGGTCGT GCCATCGCCCGTC AACT GGCGGCTGACGGC TTTGTTGTCGGGGTT CKO_04923 4513915 - 4514646 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 5770 4515308 - 4515295 - g 71 -5.9 -4.30416 | opp_overlap 4515295 4515300, overlap 4515289 ATGACGAACCGAAAA CGACG CCTT CGCCG TTTGATGAAAAGCGC TERM 5771 4515489 - 4515472 - g 71 -9.9 -3.5944 | opp_overlap 4515462 AGCCACAGCGTGAAA CCATGCA GATT TGCATGG AACAATCGCTGAAAA CKO_04924 4514643 - 4515872 + | 3-oxoacyl-(acyl carrier protein) synthase II CKO_04925 4515874 - 4516461 + | holo-(acyl carrier protein) synthase 2 TERM 5772 4518024 - 4518006 - g 73 -5.2 -4.59993 | overlap 4518007 AAATTGATAAAGAAA TTGGCGAG GTG CTCACCAC TACCGATGAGGCGCA CKO_04926 4516781 - 4518211 + | hypothetical protein TERM 5773 4518255 - 4518279 + G 74 -4.9 -4.77036 | overlap 4518260 GCTGCTGATCCCGAT GATTTTCGCCG CGT CGGTGATTATC TTTTTGATGCTGCGC TERM 5774 4518260 - 4518274 + G 74 -7.8 -4.11027 | overlap 4518255 TGATCCCGATGATTT TCGCCG CGT CGGTGA TTATCTTTTTGATGC CKO_04927 4518211 - 4519155 + | nickel transporter permease NikB CKO_04928 4519152 - 4519985 + | nickel transporter permease NikC TERM 5775 4520313 - 4520298 - g 74 -4.6 -4.68908 | overlap 4520300 CCCACGCAAAAGAAA CCTGCC TGGC GTCAGG TAAACCGGCGGATGA CKO_04929 4519985 - 4520749 + | nickel transporter ATP-binding protein TERM 5776 4521343 - 4521333 - g 78 -6.8 -4.56597 | overlap 4521334 4521342 TCGTCTGCTCAAAAA GCTG CAA CAGC AGTTCGGCACCGCCT TERM 5777 4521516 - 4521501 - g 71 -6.1 -4.36914 | opp_overlap 4521501 GCGTGTGTTACAAAA TGCGG TACTTC CCGCA TTTCCCGTGCGCCGT CKO_04930 4520746 - 4521552 + | nickel transporter ATP-binding protein CKO_04933 4522080 - 4521901 - | hypothetical protein CKO_04931 4521558 - 4521959 + | nickel responsive regulator TERM 5778 4521995 - 4522007 + GgT 70 -4.7 -4.47217 | overlap 4521970 GGCGCTTCGCTTGCC CGGCC TAC GTCCG TTTTCGTTGGTAGTT CKO_04932 4521889 - 4522020 + | hypothetical protein CKO_04934 4523188 - 4522064 - | hypothetical protein TERM 5779 4522141 - 4522119 - G 77 -7.6 -4.2704 | overlap 4522099 4522096 4522120 GCTATCAGGAAGAAA GCGCTGCCGA TCG CCAGCAGCGT CAGAAACTGTGGCCA TERM 5780 4522140 - 4522120 - G 72 -11.1 -3.15742 | overlap 4522099 4522096 4522119 CTATCAGGAAGAAAG CGCTGCCGA TCG CCAGCAGCG TCAGAAACTGTGGCC CKO_04935 4525935 - 4523188 - | hypothetical protein CKO_04936 4526999 - 4525932 - | hypothetical protein TERM 5781 4526003 - 4526014 + g 74 -7.2 -4.1964 | GTACCCATGCCATAC CCGG CAAA CCGG TTTTAACGTATTCCA TERM 5782 4526687 - 4526704 + g 74 -9.8 -3.62518 | GCTCCAGCAGGGCGC GCGCGG CGGCAA CCGCGC TTTCAGCCTCTTTGA CKO_04938 4527226 - 4527062 - | hypothetical protein CKO_04937 4527012 - 4527146 + | hypothetical protein CKO_04939 4527653 - 4528666 + | hypothetical protein CKO_04940 4529897 - 4528704 - | hypothetical protein TERM 5783 4529422 - 4529435 + g 77 -3.8 -5.00616 | opp_overlap 4529416, overlap 4529411 ATGGAGAGACCGCCC GTGG CGATCA CCAC TTTTTTCGCCGCGAC TERM 5784 4530147 - 4530167 + G 75 -4 -4.95167 | gap 1 TACATTTGTTTGCTG GCCTGG-AT TTAC ATACCGGGC TTTTATTATTGCTTG TERM 5785 4530758 - 4530742 - g 74 -2.1 -5.09204 | opp_overlap 4530756, overlap 4530744 AGACGGTAAGAAAAA GCCGCCA TTC TGGACGC GTATCGCACTTATCC CKO_04941 4530128 - 4531624 + | hypothetical protein TERM 5786 4531736 - 4531757 + T 100 -15.9 -5.53991 | opp_overlap 4531728 AATCAACCGTATTGA GCGGGTCAG GAAA CTGACCCGC TTTTTTTGCTCAGTG CKO_04942 4532102 - 4531767 - | universal stress protein UspB CKO_04943 4532494 - 4532928 + | hypothetical protein TERM 5787 4533014 - 4532995 - gf 73 -10.6 -3.052 | opp_overlap 4532996 AGCCCGATATACACA GCGCCCGC CAAT GCGGGCGT TTTTGTTTATGCCTT TERM 5788 4532996 - 4533013 + GF 100 -14.1 -5.38958 | opp_overlap 4532995 GCCCGATATACACAG CGCCCGC CAAT GCGGGCG TTTTTGTTTATGCCT CKO_04944 4532900 - 4533091 + | hypothetical protein TERM 5789 4533322 - 4533341 + G 76 -3.4 -5.09762 | overlap 4533322 ATTCGGCTATTACGG CGTCCAGG GCAT CCTGGCGG TTTTCTTTGTTAAAC CKO_04945 4533227 - 4534699 + | inner membrane transporter YhiP TERM 5790 4534720 - 4534737 + TF 100 -8.4 -6.32216 | AACTTTTAGTTTTGA CCGCGA GTAACA TCGCGG TTTTTTTTTATCTGT TERM 5791 4534756 - 4534772 + TF 70 -9.5 -3.00525 | overlap 4534752 TTTTTTATCTGTTAA CTCTTAC GAT GTAAGAG TATAATTTGAACAAA CKO_04947 4535133 - 4534933 - | hypothetical protein CKO_04946 4534807 - 4535154 + | hypothetical protein TERM 5792 4535146 - 4535158 + FH 75 -6.3 -4.41616 | CAACTAAAAGAGGGC TCGTT ATG AACGA TTTCTTTAAAGAGCT CKO_04948 4535151 - 4535438 + | hypothetical protein CKO_04949 4536007 - 4535504 - | hypothetical protein TERM 5793 4535716 - 4535701 - G 76 -5.4 -4.72272 | gap 1, opp_overlap 4535701, overlap 4535703 GCTGCTCATCAAAAA CAGCCAG ACG CTGGC-G AATTTCACGGCATTC TERM 5794 4535715 - 4535703 - G 76 -9.1 -3.98256 | opp_overlap 4535701, overlap 4535701 TGCTCATCAAAAACA GCCAG ACG CTGGC GAATTTCACGGCATT CKO_04951 4536337 - 4536116 - | hypothetical protein CKO_04950 4536241 - 4537443 + | hypothetical protein CKO_04952 4538275 - 4537517 - | putative methyltransferase TERM 5795 4538229 - 4538250 + g 79 -11.5 -3.74693 | opp_overlap 4538231, overlap 4538231 GCGGCAAGAACAGAT AAGGCGCCG TCTC CGGCGCCTG TTTCATCAACTAAGC TERM 5796 4538231 - 4538248 + g 95 -14.1 -3.4582 | opp_overlap 4538231, overlap 4538229 GGCAAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAACTAA TERM 5797 4538248 - 4538231 - G 95 -14.1 -3.76835 | opp_overlap 4538229 4538231 GGCAAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAACTAA CKO_04954 4540365 - 4538284 - | oligopeptidase A TERM 5798 4539232 - 4539243 + gH 83 -7.2 -4.64861 | opp_overlap 4539232 4539231 TACCACTTCAAACAG GCCG TTCA CGGC TTTGTTTTCCGGGAA TERM 5799 4539726 - 4539749 + gH 72 -8.8 -3.55444 | CTTTCGCTTCCGCCT GCGCTTTCGC GGCG GCAAGAGCGC TTTCCGGCATGCCCG TERM 5800 4539872 - 4539882 + gH 79 -3.2 -5.27335 | GTGGCGATTTCACCA TAGC GCT GCTG TTTTTCTTTCGGCAG TERM 5801 4539927 - 4539942 + gH 81 -4 -5.24129 | gap 1, opp_overlap 4539921 4539920, overlap 4539920 4539921 GCTCAAAATCGCGCA GCGCGTT ATC AAC-CGC TTTTTTCTGCGCGAG TERM 5802 4540462 - 4540439 - gH 71 -7.4 -3.92746 | gap 1, opp_overlap 4540440, overlap 4540437 4540440 CGTAGCGGAAAAATA CCCGGT-AGCG CTG CGCTTACCGGC CTACGGGTAATCTGC TERM 5803 4540461 - 4540440 - gH 75 -10.9 -2.95166 | gap 1, opp_overlap 4540440, overlap 4540439 4540437 GTAGCGGAAAAATAC CCGGT-AGCG CTG CGCTTACCGG CCTACGGGTAATCTG CKO_04953 4540319 - 4540492 + | hypothetical protein TERM 5804 4540467 - 4540479 + FH 72 -5.5 -4.50976 | overlap 4540440 CGCTTACCGGCCTAC GGGTA ATC TGCCC TTTTCTGCTGTAAAC CKO_04955 4540533 - 4541375 + | hypothetical protein TERM 5805 4542200 - 4542190 - g 71 -4.6 -4.56775 | overlap 4542191 AGCGGTGGTGAAAAA CGCC GAC GGCA GCCTGACCCTGCAAC CKO_04956 4541480 - 4542832 + | glutathione reductase CKO_04957 4544431 - 4542989 - | hypothetical protein TERM 5806 4543371 - 4543385 + g 74 -7.1 -4.2717 | TAGCCATGTTTCTGC TGCGC CGTCA GCGCA TTTTCATCCCCTCGT CKO_04958 4544811 - 4546460 + | trehalase CKO_04959 4548055 - 4546466 - | hypothetical protein TERM 5807 4548035 - 4548021 - G 70 -7.1 -4.10925 | opp_overlap 4548027 4548028 AGACAGTGTTCAAAA GGCGA ATGCA TCGCC TGCGAAGCGTTATTC TERM 5808 4548300 - 4548318 + r 82 -11.7 -3.43203 | opp_overlap 4548296 ATCTAAATTAATGTT GCGGGTG TAAAC CACCCGC TTAATATTATCATCC CKO_04960 4549107 - 4548337 - | hypothetical protein TERM 5809 4548665 - 4548653 - G 71 -6.2 -4.28774 | CCAGGCAACGCAAAA CGGG CCAGC CCCG TCGACACATTGAGGA TERM 5810 4549181 - 4549163 - H 73 -4.5 -4.80417 | opp_overlap 4549163 TAGAAAAACAATAAA TGTAGCG AAATG CGCTTCA CTGTTTCATTCAGAA TERM 5811 4549540 - 4549553 + G 73 -5.2 -4.57837 | AGAACCTGGTGATAC CGCG CCTGCC CGCG TTTTTACAGCAGTAT CKO_04961 4549215 - 4550114 + | hypothetical protein TERM 5812 4550189 - 4550177 - g 76 -5.5 -4.75372 | overlap 4550188 ATGACGCAGGAAAAA GACGT AAA ACGCC CTATTCAGGAACTCG CKO_04962 4550162 - 4551190 + | hypothetical protein CKO_04964 4551498 - 4551352 - | hypothetical protein TERM 5813 4551843 - 4551856 + Gr 70 -6.7 -4.08216 | CCTGCTGCCGGGCTA TGCCA CCAT TGGCA TTTTCGCCCCGCTGC CKO_04963 4551493 - 4552815 + | hypothetical protein CKO_04965 4554932 - 4552875 - | hypothetical protein TERM 5814 4552963 - 4552941 - GTR 72 -9 -3.52204 | overlap 4552937 4552949 4552950 TGACGGGGAAATCAA CGCCAGAAGC GCG GCGGCTGGCG TGACTAACGTCGCCA TERM 5815 4552988 - 4552949 - GTR 77 -10.8 -3.3858 | opp_overlap 4552975, overlap 4552941 4552937 4552950 AAATCAACGCCAGAA GC-GCGGCGGCTGGCG TGACTAACGT CGCCAGC-GCCGCAGC GACCGCGCCTCGCGC TERM 5816 4552986 - 4552950 - GTR 73 -10.9 -2.62425 | gap 1, opp_overlap 4552975, overlap 4552941 4552937 4552949 AATCAACGCCAGAAG CGCGGCGGCTGGCG TGACTAACGT CGCCAGC-GCCGCA GCGACCGCGCCTCGC TERM 5817 4553026 - 4553037 + gTr 83 -7.2 -4.56597 | GGCCCGGCTTTCACC CCCG CCTG CGGG TTTTTAAACGACCCG CKO_04966 4555035 - 4554844 - | hypothetical protein CKO_04967 4555821 - 4555054 - | EAL domain-containing protein TERM 5818 4555552 - 4555572 + g 82 -11.1 -3.9122 | opp_overlap 4555545, overlap 4555554 GAAAAAATCGGCTTT CTGCTCCAG AAA CTGGAGCTG TTCTTTCACCACATC TERM 5819 4555554 - 4555570 + g 81 -12.3 -3.54488 | opp_overlap 4555545, overlap 4555552 AAAAATCGGCTTTCT GCTCCAG AAA CTGGAGC TGTTCTTTCACCACA CKO_04968 4556054 - 4556983 + | hypothetical protein CKO_04969 4558562 - 4557069 - | hypothetical protein TERM 5820 4557233 - 4557255 + g 73 -6.2 -4.41494 | opp_overlap 4557225 GAATCAACGCCATAT CTTGCGATAG CTG CTGACGCAGG TTTTGATTCAACATC TERM 5821 4558279 - 4558297 + g 79 -11.6 -3.64703 | AGTGAACGTGCTTGC GCGGCGTC AAG GCCGCCGC TTTGCGTCAGCGCGA TERM 5822 4558616 - 4558597 - R 74 -3.6 -5.06414 | gap 1, opp_overlap 4558601, overlap 4558599 4558601 TCCTGGTAATAAAAA GAC-AGCCT GGA AGGCTTATC TGAATATGACGTTAA TERM 5823 4558769 - 4558740 - R 93 -13.6 -3.59315 | overlap 4558742 TCAATTATGCGCAAA CACCCGCAGTCC TGGAAG GGACTGCGGGCA TAAGAGGTGAGATTA TERM 5824 4558767 - 4558742 - R 100 -16.2 -3.37259 | overlap 4558740 AATTATGCGCAAACA CCCGCAGTCC TGGAAG GGACTGCGGG CATAAGAGGTGAGAT CKO_04970 4560068 - 4558782 - | C4-dicarboxylate transporter DctA CKO_04971 4562199 - 4560226 - | putative phosphodiesterase TERM 5825 4560449 - 4560467 + g 77 -4.6 -4.84527 | TCCTCCGGCAATCCC TCAACAAA CAT TTTGTCGA TTTTTAGTATATCGA CKO_04972 4562454 - 4562248 - | hypothetical protein CKO_04973 4566094 - 4562510 - | cellulose synthase subunit BcsC CKO_04974 4567185 - 4566076 - | endo-1,4-D-glucanase TERM 5826 4566337 - 4566349 + g 95 -6.9 -5.31275 | overlap 4566338 GACATCCACCTTCTC TGGCG GAA CGCCG TTTTTTGTCGTCAGC TERM 5827 4566338 - 4566348 + g 71 -8.2 -3.78042 | overlap 4566337 ACATCCACCTTCTCT GGCG GAA CGCC GTTTTTTGTCGTCAG TERM 5828 4566382 - 4566399 + g 87 -8.3 -4.59773 | CGCCATCGGTTTCAG GCGCGTC AGCA GCCGCGC TTTTTGCGGATCGCC TERM 5829 4566462 - 4566473 + g 74 -2.2 -5.12707 | GGATGGCATCGTAAC TGCT GACC AGCG TTTTTTCCGGTTTCA TERM 5830 4566924 - 4566934 + g 70 -6.8 -4.21812 | opp_overlap 4566924 4566923 GCGACTGTAAGGAAC CCTG CGC CAGG TTGTTTTGCGTCCAG CKO_04976 4569540 - 4567189 - | cellulose synthase regulator protein TERM 5831 4568360 - 4568389 + gH 72 -9.3 -3.61601 | gap 1, opp_overlap 4568327 4568325, overlap 4568358 4568364 GACAGCGAAATCGCC GCAGGTTCCAGCCC GGT GGACTGGAGC-TGC TCTTTATAGGTTTTC TERM 5832 4568753 - 4568739 - GH 73 -11.4 -2.7497 | overlap 4568738 ACATCACCGGGAAAT GCTGGC CGC GCCAGC CTGCGCGCGAACCGA TERM 5833 4569317 - 4569328 + gH 74 -7.2 -4.07568 | GTCAGCTTCACATCG CGGG AAGG CCCG TTTTGCGCCACCACG CKO_04977 4572157 - 4569551 - | cellulose synthase catalytic subunit CKO_04975 4569451 - 4569603 + | hypothetical protein TERM 5834 4571920 - 4571938 + gT 70 -10.2 -2.55253 | overlap 4571910 4571909 GAATGGCATAGCGGG CCGGGTCC AGC GGACGCGG TCGGTTGGCGTTAAT CKO_04978 4572906 - 4572154 - | cell division protein CKO_04979 4573112 - 4572918 - | hypothetical protein CKO_04980 4573199 - 4573327 + | hypothetical protein TERM 5835 4574666 - 4574677 + G 77 -3.6 -5.02439 | overlap 4574661 ACTATCGGCGGCAAC CGGC TGGT GCTG TTTTTATCATTCTGT CKO_04981 4573457 - 4574962 + | hypothetical protein TERM 5836 4574985 - 4575009 + G 78 -2.1 -5.21709 | CAACGATATCATCCA GATCATCGT CTTTTGC GCGCTGATC TTTTTTCCTCTGGGC CKO_04982 4574959 - 4575150 + | hypothetical protein TERM 5837 4575827 - 4575811 - g 100 -9.4 -5.24003 | AAGAAAAACGAAAAA CGCCGT TCCCG ACGGCG CTGCCAGCCGATGCG CKO_04983 4575147 - 4576826 + | hypothetical protein TERM 5838 4576862 - 4576835 - Tf 100 -10.6 -5.01811 | gap 1 GCAGTAAACGAAAAA GGCCTGAT-GGCG CTA CGCTTATCAGGCC TACAGGTCAGGCACA CKO_04985 4577162 - 4576869 - | hypothetical protein CKO_04986 4578382 - 4578149 - | hypothetical protein TERM 5839 4578216 - 4578231 + Gg 70 -6.8 -4.08939 | AAAGCAGGTATTACC GACGGG CTTA TCCGTC TTTCTGTGGGTCTTG CKO_04984 4577109 - 4578305 + | hypothetical protein TERM 5840 4578314 - 4578341 + gF 84 -13.4 -3.04144 | ATTCTGACCATTACG GTCGGAGCTGGC CTGC GTCGGCTCCGGC TGTTGAGAATCAAGG TERM 5841 4578373 - 4578402 + gF 80 -9.3 -4.07568 | ACAACGGCCTGGCTA TACGCATCATCCT TCCC GGGGTGACGCGTA TTTTGGGCAGGGGGC TERM 5842 4579473 - 4579497 + G 77 -8.5 -4.1021 | GAAGATCAATCCGCT GGTACTGACGC TTG GCATCTGTACC TTTATCGTTATCACG CKO_04987 4578421 - 4579719 + | hypothetical protein TERM 5843 4579730 - 4579752 + T 74 -10.5 -3.17392 | AATAACGCGTTCCGT GCGCCGTCG ATTCC TGGCGGCGC TTAACTTACCCCCTC CKO_04988 4580910 - 4579753 - | hypothetical protein TERM 5844 4581088 - 4581070 - RH 100 -11.7 -5.80817 | opp_overlap 4581070 TGGAATATAAAAAAA CCGGAGC ACAAG GCTCCGG TTATGAGGCAATAAC TERM 5845 4581070 - 4581088 + rH 79 -11.7 -3.29511 | opp_overlap 4581070 TGGAATATAAAAAAA CCGGAGC ACAAG GCTCCGG TTATGAGGCAATAAC CKO_04990 4582114 - 4581110 - | dipeptide transporter ATP-binding subunit TERM 5846 4581818 - 4581829 + Gg 75 -5.8 -4.59773 | CACAATCTGGATTTT CTGC CGAC GCAG TTTTTGCGCCTGCGG CKO_04989 4581113 - 4582147 + | hypothetical protein CKO_04991 4583094 - 4582111 - | dipeptide transporter ATP-binding subunit CKO_04992 4584007 - 4583105 - | dipeptide transporter CKO_04993 4585036 - 4584017 - | dipeptide transporter permease DppB TERM 5847 4585130 - 4585098 - R 72 -10.6 -2.91924 | overlap 4585097 GTATTGCTCACAAAT CTTATCCCACGGCA TACGC CGCCGTGGGGTAAA GCATTACGCCGGGTG TERM 5848 4585201 - 4585226 + r 93 -10.3 -4.56133 | opp_overlap 4585191, overlap 4585205 ACGCAGCGCCGCCGG GCATGGGGTGC TCAG GCACCCCTGGC TTTTAATTATTCGAC TERM 5849 4585205 - 4585222 + r 79 -12.7 -2.82152 | overlap 4585201 AGCGCCGCCGGGCAT GGGGTGC TCAG GCACCCC TGGCTTTTAATTATT CKO_04994 4586840 - 4585233 - | hypothetical protein TERM 5850 4585986 - 4585998 + g 83 -6.3 -4.94902 | overlap 4585979 CAGACCCGCCTGCTC CATCA GGT TGATG TTTTTGTCCTGCTTC TERM 5851 4586623 - 4586635 + g 77 -7.7 -4.27316 | opp_overlap 4586622 AGGCCTGGAATAACT TCGGT TGT ACCGA TTTTAAATTCCACCA TERM 5852 4587517 - 4587544 + r 78 -12.8 -2.57244 | opp_overlap 4587522, overlap 4587522 TGAATTCCAGGCAGC AAAAAGCCAGCC CGTA GGCTGGCTTTTC TGAATTGGTCGGTGA TERM 5853 4587539 - 4587522 - R 100 -12.7 -4.7497 | opp_overlap 4587517 4587522 TCCAGGCAGCAAAAA GCCAGCC CGTA GGCTGGC TTTTCTGAATTGGTC TERM 5854 4587522 - 4587539 + r 100 -12.7 -4.48221 | opp_overlap 4587522, overlap 4587517 TCCAGGCAGCAAAAA GCCAGCC CGTA GGCTGGC TTTTCTGAATTGGTC CKO_04996 4589409 - 4587718 - | phosphoethanolamine transferase TERM 5855 4587840 - 4587865 + g 72 -11.1 -3.01712 | gap 1, opp_overlap 4587828 4587839, overlap 4587837 4587858 4587864 ACAGCTCCACATGAC GGCG-CGGCGTT TTC ATCGCCGCCGCC TGTTGCAGGCGCGCA TERM 5856 4589598 - 4589565 - R 100 -18.3 -3.62255 | opp_overlap 4589562, overlap 4589561 4589566 4589589 CGGAAGAATAAGCAA GCGGCCCGGATATTT ACAA AAATATCCGGGCCGG GAAGTGGTTAAATGA TERM 5857 4589597 - 4589566 - R 100 -21.8 -2.7663 | opp_overlap 4589562, overlap 4589565 4589561 4589589 GGAAGAATAAGCAAG CGGCCCGGATATTT ACAA AAATATCCGGGCCG GGAAGTGGTTAAATG CKO_04997 4590918 - 4589623 - | hypothetical protein TERM 5858 4590917 - 4590903 - G 75 -6.4 -4.62783 | overlap 4590904 TATGCAGGGGAAAAA CGGCAT GAA ATGCCA TCAGAACGGAATGAA CKO_04998 4591782 - 4591078 - | hypothetical protein TERM 5859 4591842 - 4591859 + H 77 -11.3 -3.17362 | overlap 4591840 ATTGTTTGGCGGTTC CAGGGCT TATT AGCCCTG TATTAAATATTGTCT CKO_04999 4591941 - 4592522 + | 3-methyl-adenine DNA glycosylase I TERM 5860 4592690 - 4592706 + G 71 -4.3 -4.57073 | opp_overlap 4592701, overlap 4592699 4592701 TGAAAGGCTTTGCCA GCGTGAT GGA AGCGCGC TTTTTGGGCGCGCTG TERM 5861 4592701 - 4592719 + G 74 -10.2 -3.51934 | opp_overlap 4592701, overlap 4592690 4592699 GCCAGCGTGATGGAA GCGCGCTT TTT GGGCGCGC TGTTTGTCACGCCAG CKO_05000 4592500 - 4592931 + | hypothetical protein CKO_05002 4594843 - 4592909 - | hypothetical protein TERM 5862 4593507 - 4593495 - Gf 72 -9.1 -3.53012 | GGGTCGCGGCGGAAA TCCGC AAA GCGGA TAAACTGCGCGTTGG CKO_05001 4594814 - 4595212 + | hypothetical protein CKO_05003 4595269 - 4595412 + | hypothetical protein TERM 5863 4595878 - 4595839 - g 83 -5.7 -4.83722 | gap 1 AAGAGTACAACAAAA CCGCCGTTAACGT-AGTG GGCTA CACCGACAGTACCGGCGG GCAGGATCTGAACAT CKO_05004 4595409 - 4596071 + | putative outer membrane lipoprotein TERM 5864 4596111 - 4596072 - f 100 -17.8 -3.14211 | opp_overlap 4596086 4596109 AGTCCGTTGCAGTAA TCGTTGTGCCGGGTGGCG ACAG CGCCACCGGGCACATCGC CGGATGGCGGCTTCG TERM 5865 4596086 - 4596128 + F 77 -10.6 -3.30243 | opp_overlap 4596072, overlap 4596109 ATCGTTGTGCCGGGT GGCGACAGC-GCCACCGGGC ACATC GCCGGATGGCGGCT-TCGCC TTATCCGGCCTACAT CKO_05005 4596115 - 4597236 + | hypothetical protein CKO_05006 4597337 - 4598086 + | hypothetical protein TERM 5866 4598799 - 4598781 - g 74 -7.3 -4.07568 | CGGTGGTGCTGAAAA CCGGCGC GGATG GCGCCTG GTACAAAACCGCTGA CKO_05007 4598090 - 4599028 + | hypothetical protein TERM 5867 4599726 - 4599708 - g 100 -9.5 -4.88067 | ACGGAGTCAGAAAAA GCCGCGC TTCAG GCGCAGC TGGAAAAAGAGCAGC TERM 5868 4600093 - 4600107 + G 71 -11.4 -2.90219 | overlap 4600103 ATACCCTGCTGGTTA TCGCCG GTG CGGCGA TGTATGCCCCTTATG CKO_05008 4599129 - 4600376 + | hypothetical protein CKO_05009 4600399 - 4601373 + | hypothetical protein TERM 5869 4601409 - 4601378 - T 100 -13.6 -4.35483 | gap 1, opp_overlap 4601373, overlap 4601379 TCGCAGGATAATAAA TGGCCGGGCGGCGGC GTT GCC-CTGCCCGGCCT ACAACGTTGCTTAAC TERM 5870 4601408 - 4601379 - T 100 -17.1 -3.20808 | gap 1, opp_overlap 4601373, overlap 4601378 CGCAGGATAATAAAT GGCCGGGCGGCGGC GTT GCC-CTGCCCGGCC TACAACGTTGCTTAA CKO_05010 4602135 - 4601467 - | hypothetical protein CKO_05011 4602534 - 4602824 + | putative transcriptional regulator CKO_05013 4603356 - 4603081 - | hypothetical protein CKO_05012 4603105 - 4603317 + | major cold shock protein TERM 5871 4603347 - 4603366 + gTF 100 -11.4 -5.91981 | opp_overlap 4603347 4603345 GCTCAGAATTGAAGA TCCCTGCC AATC GGCGGGGA TTTTTTTTACCTTTT TERM 5872 4603411 - 4603396 - TfRH 100 -10.4 -5.60993 | opp_overlap 4603396 TTCCCCATAAAAAAA CCTGCC AGAT GGCAGG TTTTTTTTATTGCGA TERM 5873 4603396 - 4603411 + TFrH 100 -10.4 -6.09888 | opp_overlap 4603396 TTCCCCATAAAAAAA CCTGCC AGAT GGCAGG TTTTTTTTATTGCGA CKO_05015 4605501 - 4603432 - | glycyl-tRNA synthetase subunit beta TERM 5874 4603757 - 4603776 + Gg 76 -10.6 -3.62597 | GACACACGTTTGTTC GCCGCCGC CAGC GCGGAGGC TTCTTCCAGCGTGCG CKO_05016 4606422 - 4605511 - | glycyl-tRNA synthetase subunit alpha TERM 5875 4606036 - 4606054 + Gg 77 -8 -4.16251 | TTCCCAACCCAGACC CCAGGCGC CCA GCGTCGGG TTTTCCCAGTTATCT CKO_05014 4603651 - 4606194 + | hypothetical protein TERM 5876 4606566 - 4606542 - TR 84 -7.9 -4.77986 | overlap 4606543 GGAAAGATGTAAAAA CTGCCCTTCTG CGT CAAAAGAGCAA ACAAAACTCTCTTTG TERM 5877 4606565 - 4606543 - TR 70 -9.2 -3.45707 | overlap 4606542 GAAAGATGTAAAAAC TGCCCTTCTG CGT CAAAAGAGCA AACAAAACTCTCTTT CKO_05017 4606820 - 4606518 - | hypothetical protein TERM 5878 4607165 - 4607177 + G 100 -9.1 -5.34555 | CTCCGCCTCACGCGT CAGCG TAC CGCTG TTTTTTATGATCTCG TERM 5879 4607453 - 4607423 - g 73 -5.4 -4.6644 | opp_overlap 4607429 4607446 4607447 AATACAGGTTAAAAA CATCAGCGGCAAAA TGC TGTTGGTGCTGATG ATCGTCATTGGCGTT CKO_05018 4607010 - 4608005 + | hypothetical protein TERM 5880 4607992 - 4608011 + T 74 -11.4 -2.84693 | overlap 4607991 AGGCTGATACGCGCA GGCTGGTC AGTT GACCGGCC CTTATTCGTCATCAG CKO_05019 4608366 - 4608013 - | hypothetical protein TERM 5881 4608533 - 4608508 - R 100 -17.7 -4.15114 | AATATGAAATAAGAA TTCCTTCCGGC CACT GCCGGAAGGAA TAGCGGATTAAGACA CKO_05020 4609995 - 4608541 - | hypothetical protein TERM 5882 4610009 - 4610049 + r 77 -10.4 -3.44146 | ATCGTGACCACTCCT TTATCGATGCGCCGCGTT GGCTA AACGCGGCGCAATGGCGA TTACTTGTCGAACAG CKO_05021 4611384 - 4610050 - | xylose isomerase TERM 5883 4610695 - 4610705 + g 72 -2.4 -4.88684 | GATCAGCAGCGTGCC CTGG AAA CCTG TTTTATGTTTATGTT TERM 5884 4610897 - 4610932 + g 76 -11.8 -3.14881 | gap 1, overlap 4610891 CTGAAGACTTCCGGG TCCGGGTT-CGTCGCCG CCC CGGCGCCGTAACGCGGG TTGGTAAAGCAGTTC CKO_05022 4611739 - 4612731 + | D-xylose transporter subunit XylF TERM 5885 4614059 - 4614047 - g 70 -3.3 -4.78572 | overlap 4614048 CGGGAACCAACAAAA GGCCA TAC TGGCG CGCTGTCTCCTGCTG CKO_05023 4612809 - 4614350 + | xylose transporter ATP-binding subunit CKO_05024 4614328 - 4615509 + | hypothetical protein TERM 5886 4615532 - 4615559 + GF 75 -11.4 -3.03012 | overlap 4615529 4615535 AAAAGGGGTCATGCT CAATGCCGGT CAACACGT ACCGGCATTG TCCTTTATGACTGAT CKO_05025 4615527 - 4615658 + | hypothetical protein TERM 5887 4616148 - 4616107 - gT 70 -6.5 -4.12188 | gap 2, overlap 4616130 GCAGCACGCGCAAAA CCGGCTGGCGGACTGGCTG CAAACC CTGCC-G-CCGCAAACCGG GATTATCGCCGTTAC TERM 5888 4616752 - 4616737 - gT 76 -9 -3.67634 | CACGACGCCAAAAGA GTACCG CGAT CGGTAC AGTGAGGTGTTGTTG CKO_05026 4615592 - 4616770 + | hypothetical protein TERM 5889 4616793 - 4616820 + T 71 -7.6 -3.86897 | gap 1, opp_overlap 4616808, overlap 4616794 4616817 AGGTGGTCGTTTGTA GGCCCGGTAAGCG AAG CGCC-ACCGGGCG TTTGTGCCGGATGGC TERM 5890 4616794 - 4616819 + T 74 -11.1 -2.91924 | gap 1, opp_overlap 4616808, overlap 4616793 4616817 GGTGGTCGTTTGTAG GCCCGGTAAGCG AAG CGCC-ACCGGGC GTTTGTGCCGGATGG TERM 5891 4616817 - 4616847 + T 100 -16.9 -3.30124 | opp_overlap 4616808, overlap 4616794 4616793 AGCGAAGCGCCACCG GGCGTTTGTGCCG GATGG CGGCGCAAGCGCC TTATCCGGCCTACAA CKO_05027 4617664 - 4616873 - | hypothetical protein TERM 5892 4617147 - 4617173 + g 77 -8 -4.09963 | overlap 4617130 GCATTGGTACAACGC CCTTTTCCGCAT TTC ATGCCGAACAGG TTATTGTTGTTGCGC TERM 5893 4617766 - 4617751 - g 84 -3.3 -5.41143 | overlap 4617754 TATTTTTCAAAAAAA TGAGA GATGAA TCTCA AATCATATCAAAAAT CKO_05028 4617681 - 4617989 + | hypothetical protein TERM 5894 4619296 - 4619286 - g 72 -2.4 -4.96501 | TTCTATAAAAACAAA CCGG ATA CCCG TGCAAAAGCCATTGA CKO_05029 4618014 - 4620044 + | periplasmic alpha-amylase precursor TERM 5895 4620028 - 4620040 + F 74 -10.5 -3.22298 | AGGTCATGGTCGTCT GGGCG GGT CGCCC TTAATCCTGCCTGAC CKO_05030 4620178 - 4621470 + | valine--pyruvate transaminase TERM 5896 4621520 - 4621542 + T 83 -9.9 -4.11216 | gap 1, overlap 4621515 4621513 CTCAGACGGGTTGCG CGTGCAGTCG TTGT CG-CTGCACG TTTTCCACATCAAGG CKO_05031 4621979 - 4621506 - | hypothetical protein CKO_05032 4622912 - 4622097 - | hypothetical protein TERM 5897 4623926 - 4623889 - g 71 -6.3 -4.28548 | gap 1, opp_overlap 4623891 4623892, overlap 4623891 AGTTACCCAGGAAAA CAGCGACGAATA-CGGCG TTT CGCAGATCTTCATCGCTA TTGAGGTCGATAAGC CKO_05033 4623131 - 4624129 + | 2,3-diketo-L-gulonate reductase CKO_05034 4624141 - 4624605 + | hypothetical protein TERM 5898 4624866 - 4624885 + G 77 -11.4 -3.60627 | opp_overlap 4624860, overlap 4624883 TGGAGACCATGCGCC GTCGCGGT GAAA ACCGCGGC TTTGGGCTGGCCTCC CKO_05035 4624628 - 4625557 + | hypothetical protein CKO_05038 4627104 - 4626865 - | hypothetical protein CKO_05036 4625759 - 4626982 + | hypothetical protein TERM 5899 4628080 - 4628092 + GH 76 -4.8 -4.75404 | CAGTCTGCCAAAAGC GAGC GGCGA GCTC TTTTTCCTGCCGTTT CKO_05037 4627073 - 4628578 + | hypothetical protein TERM 5900 4628787 - 4628801 + G 74 -7.8 -4.07568 | opp_overlap 4628786 4628787 CGATGCGGGTGAAAC GCTTGC GCA GCAGGC TTTTGCCGCAGGCGC CKO_05039 4628575 - 4629237 + | 3-keto-L-gulonate-6-phosphate decarboxylase CKO_05040 4629230 - 4630090 + | putative L-xylulose 5-phosphate 3-epimerase CKO_05041 4630084 - 4630779 + | L-ribulose-5-phosphate 4-epimerase TERM 5901 4630817 - 4630793 - T 100 -9.9 -5.94214 | overlap 4630794 AAGACAATAAAAAAA TCCCTGGGCGT AAA ACGTCCAGGGT AAGAATCCGAAGGCG TERM 5902 4630816 - 4630794 - T 95 -13.4 -4.12868 | overlap 4630793 AGACAATAAAAAAAT CCCTGGGCGT AAA ACGTCCAGGG TAAGAATCCGAAGGC CKO_05042 4631278 - 4630865 - | hypothetical protein CKO_05043 4633396 - 4631858 - | hypothetical protein TERM 5903 4633147 - 4633127 - G 83 -11.9 -3.66356 | overlap 4633132 ATCGGCAATCTTAAA CAGAATCGC GGC GCGATCCTG CACGGACGTATGCGC TERM 5904 4633438 - 4633460 + H 100 -12 -4.39386 | overlap 4633440 ACAAAGGTTAGACGG GACTGGCGAA ATC TTCGCCAGCC TTTTACTGCTTTACG TERM 5905 4633440 - 4633458 + H 80 -13.2 -2.53022 | overlap 4633438 AAAGGTTAGACGGGA CTGGCGAA ATC TTCGCCAG CCTTTTACTGCTTTA CKO_05044 4633502 - 4633630 + | hypothetical protein CKO_05045 4634880 - 4633612 - | putative alcohol dehydrogenase TERM 5906 4634892 - 4634866 - G 87 -2.2 -5.65678 | opp_overlap 4634866 ATAAAATATAAAAAA GCACATTAGG TTCATCG CCTGTTGTGC TTTATATAATTCAAG CKO_05046 4636797 - 4634950 - | selenocysteinyl-tRNA-specific translation factor TERM 5907 4635668 - 4635701 + g 83 -14.5 -2.80935 | opp_overlap 4635663 4635662, overlap 4635688 TCAGGAATATTCACC GCGCCGCGTTCGAGA TGCG TCGCCAGCGCGGCGC TGTCATCCCTGGCGT CKO_05047 4638239 - 4636794 - | selenocysteine synthase TERM 5908 4637005 - 4636985 - G 95 -14.7 -3.16564 | overlap 4636996 TGGGCAGCCGATCAA CCGGCAGCG AAC CGCTGCCGA TCTGCGACAGGCAAG TERM 5909 4637712 - 4637730 + g 70 -8.8 -3.63515 | opp_overlap 4637715, overlap 4637715 4637721 CGCCGCCAGCATCAG CAACACGG CCG CCGCGTTG TTGTTCACAATACAG CKO_05048 4638893 - 4638285 - | predicted glutathione S-transferase CKO_05050 4639032 - 4638802 - | hypothetical protein TERM 5910 4639067 - 4639052 - gR 81 -6.8 -4.72986 | opp_overlap 4639052 CATTTTTACTAAAAA GCAGGT GACG ACCCGC TTAATGATCCAAATA CKO_05049 4638897 - 4639115 + | hypothetical protein CKO_05051 4640204 - 4639068 - | hypothetical protein TERM 5911 4639421 - 4639433 + g 76 -3.3 -5.06816 | overlap 4639419 TCTGCCGGAACTGGG CGACA ATT TGCCG TTTTTGTTCGGGAAT TERM 5912 4639949 - 4639962 + g 75 -3.9 -4.91712 | AAACATCGCCTTTTT TAATC AGCT GATTA TTTTTATCCGTTACC CKO_05052 4640584 - 4640207 - | hypothetical protein CKO_05053 4640960 - 4640805 - | hypothetical protein TERM 5913 4640858 - 4640843 - G 84 -6.2 -4.98531 | opp_overlap 4640843 CCCTCAAATCAAAAA TGTGAA ACAG TTCACA TTTAAACGCTATTTC TERM 5914 4642759 - 4642736 - g 73 -5.2 -4.66833 | opp_overlap 4642736 CTGGAACGTGAAAAA CTGACCCCGA CTTA TCTGGGTGAG TCTATCGCCGTACCG CKO_05054 4641116 - 4643029 + | hypothetical protein TERM 5915 4643219 - 4643240 + F 88 -12.3 -3.64703 | opp_overlap 4643236, overlap 4643220 CTGCGGTGTACGGTT TCCTCTCCC GCAA GGGAGAGGG TTTGGGTGAGGGGGG TERM 5916 4643220 - 4643239 + F 84 -13.6 -2.78679 | opp_overlap 4643236, overlap 4643219 TGCGGTGTACGGTTT CCTCTCCC GCAA GGGAGAGG GTTTGGGTGAGGGGG TERM 5917 4643699 - 4643681 - g 88 -11 -4.07885 | CATTGCCTGCGAAAA CATGGTGC GCG GCACCACG CAATTGAAAGGTCAT CKO_05055 4643301 - 4644464 + | mannitol-1-phosphate 5-dehydrogenase TERM 5918 4644497 - 4644472 - g 84 -8.9 -4.26079 | overlap 4644474 4644475 CCAAATGAGGCAAAA TACGGCGCAGG TCAT CCTGCGCCCGA ATGACAGATTGTCAG TERM 5919 4644495 - 4644474 - g 79 -11.5 -3.72347 | overlap 4644472 4644475 AAATGAGGCAAAATA CGGCGCAGG TCAT CCTGCGCCC GAATGACAGATTGTC TERM 5920 4644494 - 4644475 - g 83 -15 -2.82324 | overlap 4644474 4644472 AATGAGGCAAAATAC GGCGCAGG TCAT CCTGCGCC CGAATGACAGATTGT TERM 5921 4644890 - 4644918 + G 80 -8.8 -4.10657 | gap 1 TTTGGCGAACTGCAC TGC-GTGACGGCG TTAC CGCCGCCGCCGCA TTTTGAGACCTCTGA CKO_05056 4644461 - 4645051 + | mannitol repressor protein CKO_05057 4645273 - 4645064 - | hypothetical protein CKO_05058 4645564 - 4645926 + | hypothetical protein TERM 5922 4646261 - 4646218 - g 71 -4.5 -4.63218 | opp_overlap 4646219 4646254 4646258, overlap 4646219 4646221 TCTCTGGCAACAAAA CTACGATCCGGCCGGTAAC ATCTGG ATTTCCAGCCTGATCGCAT CGCTTCCGATCCTGT TERM 5923 4646551 - 4646563 + G 70 -5.5 -4.4078 | opp_overlap 4646551, overlap 4646558 CCAGCGTCTGCAAAT GCTGA TAG TCGGC TTTTCCTTCGGGGCA CKO_05059 4646198 - 4647853 + | L-lactate permease CKO_05060 4647850 - 4648626 + | DNA-binding transcriptional repressor LldR TERM 5924 4649013 - 4649026 + G 73 -5.9 -4.42386 | TTCCAGCTGTACGTC CTGCG CGAT CGCGG TTTTATGCGTAACGC TERM 5925 4649390 - 4649376 - g 74 -10 -3.74747 | overlap 4649380 CCAATGGTGATCAAA GGGATC CTC GATCCC GAAGACGCCCGCGAC CKO_05061 4648623 - 4649813 + | L-lactate dehydrogenase CKO_05062 4649800 - 4649940 + | hypothetical protein CKO_05063 4649955 - 4650428 + | putative tRNA/rRNA methyltransferase YibK CKO_05064 4651331 - 4650510 - | serine acetyltransferase TERM 5926 4651357 - 4651384 + r 74 -11.3 -2.83403 | gap 1, opp_overlap 4651359, overlap 4651356 4651358 AGGTATCAGGCTAAC GA-CCGGCCCGT TCTTC GCGGGCCGGGTC ATTTAATAAAACAGA TERM 5927 4651358 - 4651382 + r 73 -10.6 -2.96695 | opp_overlap 4651359, overlap 4651357 4651356 GGTATCAGGCTAACG ACCGGCCCGT TCTTC GCGGGCCGGG TCATTTAATAAAACA TERM 5928 4651381 - 4651359 - R 81 -13.4 -2.74012 | opp_overlap 4651358 4651357 4651356 GTATCAGGCTAACGA CCGGCCCG TTCTTCG CGGGCCGG GTCATTTAATAAAAC CKO_05065 4652428 - 4651409 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 5929 4651981 - 4651969 - G 71 -7.7 -4.05033 | opp_overlap 4651969 4651970 TCGACGCCAGAGAAA TTGCC GTC GGCAA ACCCGCCGCCAGTTC TERM 5930 4652426 - 4652442 + g 76 -10.9 -3.69283 | overlap 4652437 AGCATTACTTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC CKO_05066 4652895 - 4652428 - | preprotein translocase subunit SecB CKO_05067 4653194 - 4652943 - | glutaredoxin 3 CKO_05068 4653653 - 4653222 - | hypothetical protein TERM 5931 4653300 - 4653290 - GR 75 -4 -4.91109 | CTTTCAGCACAAAAA CTTT CTC AAAG CCCGCTTTGATCAGT CKO_05069 4653816 - 4653547 - | hypothetical protein TERM 5932 4653737 - 4653750 + gH 73 -5.3 -4.56775 | AATACAGCCAGAGCG TGCAA TGGA TTGCA TTTTTGCGGGGCGCT TERM 5933 4653792 - 4653778 - GH 95 -2.7 -5.81412 | opp_overlap 4653785 GCTACGGAAAAAAAA CGTCG ATCCG CGCCG TCCCCGGCTCGCTCT CKO_05070 4653923 - 4655446 + | phosphoglyceromutase TERM 5934 4655517 - 4655566 + F 76 -8.6 -4.08767 | gap 1, overlap 4655528 GCAGGTTTTCAGTCA GGCCCATGAT-TTACGCCAGCGT GTTGA GCGCTGGCGTATTGTTGTGCGCC TTTTCCGCCCATGCG TERM 5935 4655528 - 4655554 + G 100 -14.5 -3.81022 | overlap 4655517 GTCAGGCCCATGATT TACGCCAGCGT GTTGA GCGCTGGCGTA TTGTTGTGCGCCTTT TERM 5936 4655847 - 4655810 - g 84 -3.3 -5.29445 | gap 1, opp_overlap 4655831 4655835, overlap 4655811 4655822 CTGGAACAACAAAAA GCCATTCAGGAACGCAGC CTT GCCGCGCAGCTGGATG-C GGCGTTTCGCCAGGG TERM 5937 4656258 - 4656242 - g 75 -11.5 -3.35679 | overlap 4656224 CGGGCGGAGCGAGAA GCCCGCG AAG CGCAGGC GGTGCGCAATCGTCA CKO_05071 4655522 - 4656739 + | hypothetical protein CKO_05072 4656922 - 4656770 - | hypothetical protein CKO_05073 4656932 - 4657708 + | hypothetical protein CKO_05074 4658729 - 4657695 - | predicted glycosyl transferase TERM 5938 4658473 - 4658461 - G 70 -5.5 -4.42386 | overlap 4658469 TCGGCATCGACAAAA GCAAC GTA GTCGC CGGTCGCCGCGGCCA TERM 5939 4658979 - 4658969 - g 70 -3.2 -4.79053 | AAAGAGGAAAATAAA GACC TTA AGTC CCTGATGGATAAGTA CKO_05075 4658909 - 4659595 + | lipopolysaccharide core biosynthesis protein CKO_05076 4660674 - 4659649 - | L-threonine 3-dehydrogenase TERM 5940 4660497 - 4660514 + g 76 -2.7 -5.01732 | ATTCATGCCCTACCA CCATC GGAACCGG GATGG TTTTTTGCGACCATT CKO_05077 4661880 - 4660684 - | 2-amino-3-ketobutyrate coenzyme A ligase CKO_05078 4662096 - 4663028 + | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 5941 4663577 - 4663587 + G 78 -6.8 -4.56597 | CTTTCCGCTGAACGT CCGA TGA TCGG TTTTTGCCCCGGCGC CKO_05079 4663037 - 4664083 + | ADP-heptose:LPS heptosyltransferase II CKO_05080 4664117 - 4665055 + | ADP-heptose:LPS heptosyl transferase I TERM 5942 4665080 - 4665091 + G 73 -5.8 -4.52803 | AGATTAATCATGCTT CGTG GACA CACG TTTTCTCGCTTTATC CKO_05081 4665074 - 4666357 + | hypothetical protein TERM 5943 4666506 - 4666517 + G 71 -5.8 -4.37092 | opp_overlap 4666506 GATTTGACTGAAGAA CGCA TAAA TGCG TTTTATCGCGAACAT CKO_05082 4666350 - 4667363 + | hypothetical protein TERM 5944 4667577 - 4667563 - g 78 -2.1 -5.21683 | ATTGAAAAAAAGAAA GGTCT GCTGG AAACC ATTAAAAATTATATA CKO_05083 4667365 - 4668420 + | lipopolysaccharide core biosynthesis protein TERM 5945 4669179 - 4669192 + G 75 -6.7 -4.51238 | TAAAGAACATACGGG GCTGT CGCA ACAGC TTTATGTTTTCTACC CKO_05084 4668421 - 4669365 + | hypothetical protein TERM 5946 4669372 - 4669387 + T 100 -10.4 -5.29385 | opp_overlap 4669372 ATTCATTAAAAAAAA GCTCCC CGAG GGGAGC TTTTTTACTTACCTT TERM 5947 4669387 - 4669372 - T 100 -10.4 -5.86965 | opp_overlap 4669372 ATTCATTAAAAAAAA GCTCCC CGAG GGGAGC TTTTTTACTTACCTT CKO_05085 4670384 - 4669392 - | hypothetical protein TERM 5948 4670329 - 4670352 + g 91 -6.8 -5.26316 | GGACTCTCCCCGGCT GGTGCTTGAT TAAA ATCAAGTATC TTTTTTATAGACTGA CKO_05086 4671441 - 4670422 - | hypothetical protein TERM 5949 4670564 - 4670577 + g 100 -8.1 -5.252 | TTGAGTAACGATTTT TCGGC CCAT GCCGA TTTTTTATAAGCCTC CKO_05087 4672270 - 4671473 - | hypothetical protein CKO_05089 4673387 - 4672263 - | hypothetical protein TERM 5950 4673065 - 4673053 - GH 71 -3.3 -4.77775 | overlap 4673049 AGCTTATAAAAGAAA CCCTT TTC ACGGG CGACTTTTTCCGCGT CKO_05088 4673292 - 4673447 + | hypothetical protein CKO_05090 4673810 - 4675087 + | 3-deoxy-D-manno-octulosonic-acid transferase CKO_05091 4675096 - 4675575 + | phosphopantetheine adenylyltransferase CKO_05093 4676436 - 4675627 - | formamidopyrimidine-DNA glycosylase TERM 5951 4676517 - 4676488 - gR 90 -10.1 -4.38712 | opp_overlap 4676495, overlap 4676495 GGGACGGCCAGAAAA CAAAAAACCCCGC CGAA GCGAGGTTTTTCA CTACATCAAAGCGAG TERM 5952 4676495 - 4676510 + Gr 75 -6 -4.67353 | opp_overlap 4676495 4676488 CCAGAAAACAAAAAA CCCCGC CGAA GCGAGG TTTTTCACTACATCA TERM 5953 4676510 - 4676495 - gR 100 -8.2 -5.86976 | opp_overlap 4676495, overlap 4676488 CCAGAAAACAAAAAA CCCCGC CGAA GCGAGG TTTTTCACTACATCA CKO_05092 4676396 - 4676542 + | hypothetical protein CKO_05094 4676702 - 4676535 - | 50S ribosomal protein L33 TERM 5954 4677163 - 4677150 - R 72 -6.7 -4.2074 | overlap 4677153 TCCCGAACAGACAAA GATCC CGAT GGATC GCGCGAAGTGTTCTA CKO_05095 4677838 - 4677176 - | DNA repair protein RadC TERM 5955 4677941 - 4677893 - H 80 -13.4 -2.52464 | gap 2, opp_overlap 4677882 4677912, overlap 4677936 CCTGGGGTGAATCGA CGCCCGTATTTCACTCCTGCGTAG CGC CT-CGCAA-AGTGAATTACGGGCA ACTGCACGACGGGAT CKO_05096 4677928 - 4679232 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase CKO_05097 4679210 - 4679668 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 5956 4680350 - 4680318 - gT 71 -10.5 -2.62792 | opp_overlap 4680318 4680334, overlap 4680317 4680315 AGCGAGTTCAAATAC CGCCCAACGGACG ATTTCGA CGCCCGCTGGCCG TTGGTTGCTGCGCAA CKO_05099 4680444 - 4680310 - | hypothetical protein CKO_05098 4679778 - 4680374 + | nucleoid occlusion protein CKO_05100 4681106 - 4680450 - | orotate phosphoribosyltransferase TERM 5957 4680960 - 4680940 - G 70 -3.1 -4.82901 | GCTTCGGCATAAAAA CGTCCCAGC AGA GCCAGATCG CGCCCGGTATTAAAC TERM 5958 4681149 - 4681132 - R 100 -8.4 -6.06529 | TACAGACAAAAAAAA GGCGAC TCGCTG GTCGCC TTAAAATCAATTTTC CKO_05101 4681872 - 4681156 - | ribonuclease PH TERM 5959 4681736 - 4681726 - G 71 -4.6 -4.56597 | opp_overlap 4681727, overlap 4681727 CTGCCCTTTCAAAAA GCGC GGT ACGC CTTCTTCGATGGATG CKO_05102 4681998 - 4682861 + | hypothetical protein TERM 5960 4682871 - 4682906 + F 95 -14.8 -3.53031 | gap 1, overlap 4682872 4682874 GAGTAAACCTCATTC CCACGTAGC-CCGTCGC GAT GCGATGGCGCTACGTGC TTCCTTTACACTCCG TERM 5961 4682872 - 4682905 + F 100 -18.3 -2.71497 | gap 1, overlap 4682871 4682874 AGTAAACCTCATTCC CACGTAGC-CCGTCGC GAT GCGATGGCGCTACGTG CTTCCTTTACACTCC TERM 5962 4682874 - 4682903 + F 93 -15.1 -2.89837 | gap 1, overlap 4682872 4682871 TAAACCTCATTCCCA CGTAGC-CCGTCGC GAT GCGATGGCGCTACG TGCTTCCTTTACACT CKO_05103 4683119 - 4683736 + | hypothetical protein CKO_05104 4685463 - 4683733 - | NAD-dependent DNA ligase LigB CKO_05105 4685672 - 4686295 + | guanylate kinase CKO_05106 4686350 - 4686625 + | DNA-directed RNA polymerase subunit omega TERM 5963 4687264 - 4687253 - g 74 -7.2 -4.17523 | overlap 4687254 AAAGAAGTGGTAAAA GCCG CTCG CGGC AACCGCAAAGAGATG CKO_05107 4686644 - 4688755 + | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 5964 4689306 - 4689320 + G 71 -10 -3.53563 | opp_overlap 4689289 4689306 4689302 CTGCCGGAAGACGAA CAGCAG CGC CTGCTG TTTGAGGGCGGCTAT TERM 5965 4689320 - 4689306 - g 70 -10 -3.36273 | opp_overlap 4689306, overlap 4689289 4689302 CTGCCGGAAGACGAA CAGCAG CGC CTGCTG TTTGAGGGCGGCTAT CKO_05108 4688760 - 4689449 + | tRNA guanosine-2'-O-methyltransferase TERM 5966 4689786 - 4689768 - gT 83 -5.8 -4.8622 | overlap 4689770 CGCGGCAATGAAAAA CAGCCTGG CGA CCGGGCGG CGCGTACTGGCCTAT TERM 5967 4689784 - 4689770 - gT 71 -7 -4.05402 | overlap 4689768 CGGCAATGAAAAACA GCCTGG CGA CCGGGC GGCGCGTACTGGCCT TERM 5968 4690166 - 4690187 + GT 100 -13.7 -4.07568 | opp_overlap 4690153 4690152 ACCTGAGCATGCTGG CGCTGCGTG CCGG CGCGCAGCG TTTTCACGCCCAGCG CKO_05110 4691611 - 4691423 - | hypothetical protein CKO_05109 4689454 - 4691535 + | ATP-dependent DNA helicase RecG TERM 5969 4691685 - 4691668 - g 71 -9.9 -3.55444 | CGTCGAGTCGGCAAA TGCGCAA CCGG TTGCGCA GACGCAAAACAGCGA CKO_05111 4691624 - 4693030 + | hypothetical protein TERM 5970 4693065 - 4693037 - f 72 -8.1 -3.75897 | opp_overlap 4693031 4693029, overlap 4693038 AAGCCGTAAGCGAAA TGCGGTGATGATC GAC AATCATCGCCGCT GTAACGCTCTTTCAC TERM 5971 4693064 - 4693038 - f 77 -11.6 -2.85056 | opp_overlap 4693031 4693029, overlap 4693037 AGCCGTAAGCGAAAT GCGGTGATGATC GAC AATCATCGCCGC TGTAACGCTCTTTCA TERM 5972 4694322 - 4694293 - g 84 -12.9 -3.34715 | opp_overlap 4694315 4694317, overlap 4694272 4694291 CAGGCTGGTTAAACA GCCTGACGCTGAA AAAA TTCAGCGCCAGTC GCAACCTGGTGATTG CKO_05112 4693152 - 4694861 + | hypothetical protein CKO_05113 4694978 - 4694823 - | hypothetical protein TERM 5973 4694895 - 4694905 + g 74 -6.8 -4.36914 | overlap 4694862 GCTACGCGTACCGGG CCTG TGA CAGG TTTTCTCACGAAACG CKO_05114 4695101 - 4695271 + | hypothetical protein CKO_05115 4696397 - 4695489 - | hypothetical protein TERM 5974 4696034 - 4696023 - G 75 -3.6 -4.85599 | overlap 4696025 4696026 CTGATCGGAGAAAAA CACC CGCA GGCG CAACGCAGGGTGGCG CKO_05116 4696509 - 4697516 + | hypothetical protein TERM 5975 4697524 - 4697548 + F 100 -11.4 -5.24129 | opp_overlap 4697520, overlap 4697525 GCTTCTGATAAGCCC CCAGGGGCGA GAAAG TCGCCCCTGC TTTTTTATGCGCCGC TERM 5976 4697525 - 4697547 + F 100 -14.9 -3.73995 | opp_overlap 4697520, overlap 4697524 CTTCTGATAAGCCCC CAGGGGCGA GAAAG TCGCCCCTG CTTTTTTATGCGCCG TERM 5977 4698182 - 4698194 + G 73 -6.2 -4.49344 | GATGCGAGAAATGCT GCGC AACTG GCGC TTTTATCATGAATTT CKO_05117 4697643 - 4698731 + | hypothetical protein TERM 5978 4699117 - 4699142 + G 72 -3.9 -4.82901 | gap 1, opp_overlap 4699114 4699118, overlap 4699118 CCATTGAGAAATCCA ATGCCGCCACCG CAA CGGTG-CTGCAA TTTTTATCGCCGACG CKO_05118 4698846 - 4699727 + | hypothetical protein TERM 5979 4699735 - 4699762 + T 70 -4.9 -4.49337 | opp_overlap 4699728 4699735, overlap 4699730 CGGCATAAGGCAAAA GAGTGGACT CCAATAATCT GGTCCACTC TTTTATCGCTTATAA CKO_05119 4700410 - 4699772 - | hypothetical protein CKO_05120 4701158 - 4700427 - | hypothetical protein CKO_05121 4702254 - 4701169 - | hypothetical protein TERM 5980 4701409 - 4701399 - G 71 -4.6 -4.62069 | opp_overlap 4701385 TCGCCAGCGCAAAAA CACC GTT GGCG TTATCAATAATGGCC TERM 5981 4701450 - 4701471 + g 75 -6.5 -4.42788 | TAAACAAATAGCTGA TGCTCGACA ACCC TGCCGGGCA TTTTGTAAAGTTCAG CKO_05122 4704812 - 4702269 - | hypothetical protein TERM 5982 4702881 - 4702918 + gr 78 -5.6 -4.74215 | GCCGCCCATGCTGGT CCAC-GGCGAAGTCCAGT TACC ACTG-ACGCCGCCCGTGG TTTTATTGCTGCTAT CKO_05123 4705530 - 4704784 - | hypothetical protein TERM 5983 4704894 - 4704911 + gr 72 -3.5 -4.74103 | gap 1, overlap 4704897 ATTTTTTATTAGCGA GCGGAAAT ACT ATTTC-GC TTTTTGGCTTCACCA TERM 5984 4705038 - 4705055 + gr 74 -2 -5.05712 | overlap 4705040 TTACTACTTTTATGT TGTTCC CTTGTT GGAATA TTTTTAATTCTTTAT TERM 5985 4705222 - 4705210 - GR 72 -5.5 -4.41494 | opp_overlap 4705219, overlap 4705213 CATGTTGAACCAAAA CAAGG ACT CCCTG TCCTGCGGCAATGAC TERM 5986 4705545 - 4705578 + r 79 -8.2 -4.2704 | opp_overlap 4705546 4705547 4705549, overlap 4705547 TCTCATCACCTCATA ATCAGGAGTAAAGG ACGCCG CCTTTACTCCTGTC TTTATTACTCGTAAA TERM 5987 4705577 - 4705546 - R 82 -11.7 -3.34043 | opp_overlap 4705545 4705547, overlap 4705547 4705549 CTCATCACCTCATAA TCAGGAGTAAAGG ACGCCG CCTTTACTCCTGT CTTTATTACTCGTAA TERM 5988 4705547 - 4705576 + r 100 -15.2 -3.73445 | opp_overlap 4705546 4705547 4705549, overlap 4705545 TCATCACCTCATAAT CAGGAGTAAAGG ACGCCG CCTTTACTCCTG TCTTTATTACTCGTA TERM 5989 4705576 - 4705547 - R 90 -15.2 -2.60212 | opp_overlap 4705547 4705545, overlap 4705546 4705549 TCATCACCTCATAAT CAGGAGTAAAGG ACGCCG CCTTTACTCCTG TCTTTATTACTCGTA TERM 5990 4705574 - 4705549 - R 77 -12 -2.84 | opp_overlap 4705547 4705545, overlap 4705547 4705546 ATCACCTCATAATCA GGAGTAAAGG ACGCCG CCTTTACTCC TGTCTTTATTACTCG CKO_05124 4706140 - 4705583 - | hypothetical protein CKO_05125 4706893 - 4707030 + | hypothetical protein CKO_05126 4707947 - 4707042 - | cytoplasmic membrane lipoprotein-28 TERM 5991 4708003 - 4707977 - R 80 -5.7 -5.04597 | gap 1 AGGCATATACAAAAA GCCCGG-TGGCG CGAA CGCTTGCCGGGC CTACGTAAACTACGC CKO_05127 4708764 - 4708021 - | hypothetical protein TERM 5992 4708417 - 4708430 + g 80 -4.5 -5.00616 | overlap 4708405 TGTCGGGCTGACCAG CGCGT TGAT ATGCG TTTTTTCGCCGCCCG CKO_05128 4709860 - 4708751 - | hypothetical protein TERM 5993 4709673 - 4709700 + g 100 -12 -5.00884 | gap 1 TAACTGTCTTCCGCG CCGGTATAGCGGG AGA CCCGCTC-ACCGG TTTTTTCCACCAGCT TERM 5994 4709743 - 4709733 - G 83 -8.2 -4.38712 | overlap 4709734 TCGATCTCGACAAAA GCGG AGG CCGC ACGCGCCGTGGCGTG CKO_05129 4710724 - 4709864 - | hypothetical protein TERM 5995 4709988 - 4709969 - G 74 -10 -3.64103 | overlap 4709971 GATGTAGATGGCAAA TACTGCCG CCAG CGGCAGCA GGCCAGGCGCAATCG TERM 5996 4709989 - 4709971 - G 80 -12.4 -3.39844 | overlap 4709969 TGTAGATGGCAAATA CTGCCGCC AGC GGCAGCAG GCCAGGCGCAATCGA TERM 5997 4710351 - 4710375 + g 74 -6.9 -4.26076 | overlap 4710359 ATGGAATCGCCCATC CCGGCCAGCGG CCC CATCAGGCCGG TTTTAATCCCGGTGA CKO_05130 4711470 - 4710721 - | hypothetical protein CKO_05131 4711979 - 4711494 - | hypothetical protein TERM 5998 4711641 - 4711631 - G 77 -8.2 -4.08692 | opp_overlap 4711631 TAATGTTCTGGAAAA CCGC TTT GCGG TTTGGCCCACCGCCT TERM 5999 4711830 - 4711842 + g 70 -3.4 -4.72272 | GTTTGGCGGCGCGGC CATC AGGTA GATG TTTTTCATAAACGGA CKO_05132 4712398 - 4711991 - | hypothetical protein TERM 6000 4712658 - 4712628 - g 74 -11 -3.18118 | overlap 4712626 4712629 CGAGGGGAGAAGAGA GGTCTGGCGAGGCG CAG CGCCACGCCAGATA AGGGATCAGCTATAG TERM 6001 4712657 - 4712629 - g 81 -14.5 -2.5055 | overlap 4712628 4712626 GAGGGGAGAAGAGAG GTCTGGCGAGGCG CAG CGCCACGCCAGAT AAGGGATCAGCTATA CKO_05133 4712512 - 4712673 + | hypothetical protein CKO_05134 4715462 - 4712664 - | hypothetical protein TERM 6002 4713019 - 4713009 - G 71 -8.2 -3.86015 | opp_overlap 4713009 CAGCGCGCTGATAAA GCGC ATT GCGC TACGTTCCATTTCCA TERM 6003 4714251 - 4714264 + g 77 -8.1 -4.07568 | TTCAATCTCAGCGCC CGTCG CCAG CGACG TTTTCAAGGCGGGCA TERM 6004 4715282 - 4715265 - G 74 -4.7 -4.7254 | opp_overlap 4715266 4715267, overlap 4715267 ACGGTGCAGGAAAAA CACCGGG CGGC CCCGGCT TTTGATCGCCAGACC TERM 6005 4715266 - 4715281 + g 71 -6 -4.25104 | opp_overlap 4715265 4715267, overlap 4715267 CGGTGCAGGAAAAAC ACCGGG CGGC CCCGGC TTTTGATCGCCAGAC TERM 6006 4715280 - 4715267 - G 80 -9.5 -3.98256 | opp_overlap 4715267 4715266, overlap 4715265 GGTGCAGGAAAAACA CCGGG CGGC CCCGG CTTTTGATCGCCAGA CKO_05135 4715582 - 4715944 + | hypothetical protein TERM 6007 4715952 - 4715973 + T 72 -5.8 -4.44819 | opp_overlap 4715948, overlap 4715953 ATATGTAAAACGTCA TGGGTGAC CGAATC GTCACCCC TTTTGATGTATTATC CKO_05136 4717225 - 4715984 - | ribonucleoside transporter TERM 6008 4716302 - 4716281 - G 78 -12.3 -3.28712 | TTCGCTTCCCCACAA CGTCAGCAC CAGC GCGCTGACG GCCAGAACCAACGGC TERM 6009 4716694 - 4716684 - G 74 -2.4 -5.09225 | overlap 4716686 ATCCCACCTAAAAAA CTGC CCA GCGG CGCGGCGATCACCAG TERM 6010 4717136 - 4717114 - G 71 -6.2 -4.23758 | overlap 4717116 4717117 ACGCCACAGCGAAAA CAGCCGACCA GTT TGGCCGGATA ATCGTCTCAGCATGG CKO_05137 4717782 - 4717330 - | hypothetical protein TERM 6011 4717468 - 4717481 + g 82 -5.2 -5.03314 | opp_overlap 4717464 CGCGTCAGTAATTGG CGCG GCCAGA CGCG TTTTTTGCAGCTGAC TERM 6012 4717628 - 4717615 - G 87 -8.1 -4.62783 | opp_overlap 4717614 4717615 CAGGTACTGTAAAAA CGCCT CTCC AGGCG CTTTGCCCATCTGGT CKO_05138 4718549 - 4717794 - | hypothetical protein TERM 6013 4719095 - 4719083 - g 70 -5.5 -4.4727 | TGAACACGCACAAAA CGCAG GCG CTACG GGCGTACTGGTGGTG CKO_05139 4718721 - 4719692 + | hypothetical protein SEQUENCE gi|157149300|ref|NC_009793.1| Citrobacter koseri ATCC BAA-895 plasmid pCKO3, complete sequence (length 9294) CKO_pCKO3p06141 145 - 324 + | hypothetical protein TERM 1 322 - 350 + T 100 -13.1 -5.04249 | opp_overlap 325, overlap 324 AAGCTCGGGGAGGAA TAACAGCACCGGC ATG GCCGGTGCTGGCA TTTATTTTTTGCCGA TERM 2 324 - 348 + T 90 -15.7 -2.75795 | opp_overlap 325, overlap 322 GCTCGGGGAGGAATA ACAGCACCGGC ATG GCCGGTGCTGG CATTTATTTTTTGCC TERM 3 347 - 325 - T 100 -19.2 -3.71848 | opp_overlap 324 322 CTCGGGGAGGAATAA CAGCACCGGC ATG GCCGGTGCTG GCATTTATTTTTTGC CKO_pCKO3p06142 882 - 352 - | hypothetical protein CKO_pCKO3p06143 1620 - 889 - | hypothetical protein CKO_pCKO3p06144 3584 - 1620 - | hypothetical protein TERM 4 2062 - 2044 - G 85 -16 -2.70354 | overlap 2041 GTTTTCACAAATTCA GCGGGCAG ATC CTGCCCGC ACTGCCCGAAATCGC TERM 5 2222 - 2251 + g 80 -4.3 -5.00616 | gap 1, opp_overlap 2225 ACTCGTCCCGCGCAA TGATGATTTGCGCG CAG CGGGCAAA-CAGCA TTTTTTGCACACGGA TERM 6 3265 - 3240 - G 78 -13.3 -2.57344 | gap 1, overlap 3215 3213 3239 CAGCCCCCCCAGAAG GGCCAGACCGGC CGC GCCGGTC-AGCC AGTACGCGTAGTTCC TERM 7 3326 - 3353 + g 84 -9 -4.31835 | overlap 3327 3338 CGGGCGAATCCAGCG AGGCCAGCACCG AAAA TGGCGCTGGCCG TTTATTATCGCGCTT TERM 8 3327 - 3352 + g 83 -12.5 -3.18378 | overlap 3326 3338 GGGCGAATCCAGCGA GGCCAGCACCG AAAA TGGCGCTGGCC GTTTATTATCGCGCT CKO_pCKO3p06145 3914 - 3597 - | hypothetical protein TERM 9 3673 - 3642 - G 100 -15.8 -3.28712 | opp_overlap 3643 3671, overlap 3605 GCCCCCGCTGCACAA GCCGCGGACATGCC CCAA GGCATGGCGGCGGC GGTCACGTCCGTGGT TERM 10 3897 - 3920 + g 74 -3.1 -4.88736 | gap 1, overlap 3898 CAGCTTTGCTGCTTC GCCA-GGTGC GTCCA GCACCGTGGA TTTTTGTGGGTGGTC TERM 11 4066 - 4093 + H 79 -11.2 -3.34988 | overlap 4064 4063 GGGATATCCCCCTGA GGTCAGCCACGC CCTC GCGGGGATGACC TGTATTTCTCCGTAA CKO_pCKO3p06146 4442 - 4819 + | hypothetical protein TERM 12 4941 - 4969 + T 70 -9.8 -3.05384 | gap 1 AAAGCCAGTTACCAC GGTTAAG-CAGTT CCCC AACTGACTTAACC TTCGATCAAACCACC TERM 13 4972 - 5003 + T 79 -10.2 -3.53012 | opp_overlap 4980, overlap 4980 AACTGACTTAACCTT CGATCAAACCACCT CCCC AGGTGGTTTTTTCG TTTACAGGGCAAAAG TERM 14 4980 - 4995 + T 100 -9 -5.37593 | opp_overlap 4980, overlap 4972 TAACCTTCGATCAAA CCACCT CCCC AGGTGG TTTTTTCGTTTACAG TERM 15 4995 - 4980 - T 76 -9 -3.737 | opp_overlap 4972 4980 TAACCTTCGATCAAA CCACCT CCCC AGGTGG TTTTTTCGTTTACAG TERM 16 5053 - 5037 - T 91 -7.3 -5.61596 | opp_overlap 5037 5049, overlap 5049 ACGCGCAGAAAAAAA GGATCTC AAG AAGATCC TTTGATCTTTTCTAC CKO_pCKO3p06148 5214 - 5065 - | hypothetical protein TERM 17 5264 - 5237 - R 89 -9.2 -4.65895 | opp_overlap 5237 5237, overlap 5238 5239 CCCTGTATTTAAAAA CCCCGGTATTCA TCCC TGAACACCGGAA GTCTGTATTTCAAAT TERM 18 5263 - 5238 - R 77 -10.5 -3.39216 | opp_overlap 5237 5237, overlap 5237 5239 CCTGTATTTAAAAAC CCCGGTATTCA TCCC TGAACACCGGA AGTCTGTATTTCAAA TERM 19 5262 - 5239 - R 76 -11.8 -2.63208 | opp_overlap 5237 5237, overlap 5238 5237 CTGTATTTAAAAACC CCGGTATTCA TCCC TGAACACCGG AAGTCTGTATTTCAA CKO_pCKO3p06149 5556 - 5299 - | hypothetical protein CKO_pCKO3p06150 6963 - 5566 - | hypothetical protein TERM 20 6293 - 6316 + g 74 -4.6 -4.71426 | gap 1 TCTTCCGGGTGAGCA GCGTC-CCA TGCCTGC TGGCGACGC TTTTCTTCCTCCAGA TERM 21 7330 - 7296 - H 100 -12.4 -5.22258 | opp_overlap 7326, overlap 7326 TAAACTAAAATAAAA TACTGTACATATAACC ACT GGTTTTATATACAGTA TAAAAATTACGCTGC CKO_pCKO3p06151 7373 - 7600 + | hypothetical protein CKO_pCKO3p06153 7758 - 7579 - | hypothetical protein CKO_pCKO3p06152 7654 - 8073 + | hypothetical protein CKO_pCKO3p06156 8666 - 8346 - | hypothetical protein CKO_pCKO3p06154 8379 - 8642 + | hypothetical protein TERM 22 8913 - 8878 - g 70 -5.2 -4.52047 | opp_overlap 8870 8879 8881, overlap 8870 8879 GACCAGACCAGAAAA GTCCGGGTTCTGGCCG TGGT CGGCCAGCGCCAGAAT CCCCATATTGTTCTC CKO_pCKO3p06155 8632 - 8931 + | hypothetical protein SEQUENCE gi|157149316|ref|NC_009794.1| Citrobacter koseri ATCC BAA-895 plasmid pCKO2, complete sequence (length 5601) CKO_pCKO2p07156 3 - 179 + | hypothetical protein TERM 1 173 - 188 + G 76 -3.2 -5.1287 | CGGAGGAGAGGATGG CGGTTA AGCG TACCCG TTTTTTAGGTATCCG CKO_pCKO2p07157 169 - 513 + | hypothetical protein TERM 2 674 - 658 - g 71 -4.3 -4.62069 | opp_overlap 658 661 666, overlap 661 GCCCTACGCCAAAAA GTACACC TCC GGCGTCC TGTCTTTTGCTGAAC CKO_pCKO2p07158 503 - 2038 + | hypothetical protein TERM 3 2090 - 2125 + T 95 -13.4 -4.12532 | opp_overlap 2082 2081, overlap 2091 CTGAAACCGGATGTC ATTCACCTGGCTGCAT GGCT ATGCAGCCAGGTAAAA TTTATCTGTCGCGAA TERM 4 2091 - 2124 + T 100 -16.9 -3.07198 | opp_overlap 2082 2081, overlap 2090 TGAAACCGGATGTCA TTCACCTGGCTGCAT GGCT ATGCAGCCAGGTAAA ATTTATCTGTCGCGA TERM 5 2281 - 2270 - T 93 -7.2 -5.76633 | opp_overlap 2270 GCAGATACAAAAAAA GCCC CGGA GGGC TTTTAACTACTGACT TERM 6 2270 - 2281 + T 74 -7.2 -4.21462 | opp_overlap 2270 GCAGATACAAAAAAA GCCC CGGA GGGC TTTTAACTACTGACT CKO_pCKO2p07159 2496 - 2296 - | hypothetical protein CKO_pCKO2p07160 2587 - 2811 + | hypothetical protein CKO_pCKO2p07161 2846 - 3061 + | hypothetical protein TERM 7 3077 - 3063 - gT 81 -12.8 -3.10012 | opp_overlap 3063 AAGTTTACGACTGAA GCCCGC TAT GCGGGC TTTTTTGATGCCGAC TERM 8 3063 - 3077 + GT 100 -12.8 -5.14563 | opp_overlap 3063 AAGTTTACGACTGAA GCCCGC TAT GCGGGC TTTTTTGATGCCGAC CKO_pCKO2p07163 3481 - 3131 - | hypothetical protein CKO_pCKO2p07162 3033 - 3182 + | hypothetical protein CKO_pCKO2p07164 4092 - 3547 - | hypothetical protein TERM 9 3817 - 3832 + g 100 -6.2 -5.69793 | AGGTCCTTTGCGTCC TATTGC CTGC GCAATA TTTTTTATTTCATCT CKO_pCKO2p07165 4501 - 4118 - | hypothetical protein TERM 10 4635 - 4651 + G 100 -7.3 -5.61596 | opp_overlap 4635 TGACGATCATTTAAA GGATCTT CTT GAGATCC TTTTTTTCTGCGCGT CKO_pCKO2p07166 4513 - 4668 + | hypothetical protein TERM 11 4716 - 4685 - Tf 86 -11.6 -3.59979 | opp_overlap 4693, overlap 4693 CTCTTGCACTGTAAA CGAAAAAACCGCCT GGGG AGGCGGTTTGATCG AAGGTTAAGTCAGTT TERM 12 4708 - 4693 - Tf 100 -10.4 -5.37593 | opp_overlap 4693, overlap 4685 CTGTAAACGAAAAAA CCGCCT GGGG AGGCGG TTTGATCGAAGGTTA TERM 13 4693 - 4708 + TF 83 -10.4 -3.737 | opp_overlap 4693 4685 CTGTAAACGAAAAAA CCGCCT GGGG AGGCGG TTTGATCGAAGGTTA TERM 14 4747 - 4719 - Tf 70 -9.8 -3.05384 | gap 1 GGCGGTTTGATCGAA GGTTAAGTCAGTT GGGG AACTG-CTTAACC GGGTAACTGGGTATA CKO_pCKO2p07169 5065 - 4829 - | hypothetical protein TERM 15 4869 - 4879 + gF 74 -4.6 -4.71061 | opp_overlap 4862, overlap 4858 4857 GTTACCAATGGCTGC TGCC AGT GGCG TTTTTGCGTGTCCGT CKO_pCKO2p07168 4874 - 5173 + | hypothetical protein