TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.272487 %AT, 2952968 nt, 14655 terms. Intergenic: 0.291954 %AT, H2T: 270531 nt, 1441 terms; T2T: 99956 nt, 1011 terms; H2H: 107697 nt, 1261 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|148245183|ref|NC_009478.1| Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM1, complete sequence (length 27357) pCM1_0001 1253 - 1462 + | hypothetical protein pCM1_0002 1459 - 1857 + | hypothetical protein parA 2059 - 2733 + | putative partitioning protein, ATPase parB 2730 - 3008 + | putative partitioning protein traG 3088 - 5289 + | hypothetical protein pCM1_0006 5637 - 6128 + | hypothetical protein pCM1_0007 6173 - 6400 + | hypothetical protein TERM 1 6461 - 6403 - T 95 -15.5 -4.24294 | gap 1, opp_overlap 6417, overlap 6404 6417 ACGAACCACGTAAAA CGCA-ACACCAAAAAGGCCTTCGCTACG TAGC CGTAGTGGAGGCCTTTTTGACGTCTCCG TGTTCATGCAAGTAG TERM 2 6459 - 6404 - T 80 -17 -3.13853 | opp_overlap 6417, overlap 6403 6417 CGAACCACGTAAAAC GCAACACCAAAAAGGCCTTCGCTACG TAGC CGTAGTGGAGGCCTTTTTGACGTCTC CGTGTTCATGCAAGT TERM 3 6446 - 6417 - T 100 -12.1 -4.88228 | opp_overlap 6417, overlap 6404 6403 ACGCAACACCAAAAA GGCCTTCGCTACG TAGC CGTAGTGGAGGCC TTTTTGACGTCTCCG TERM 4 6417 - 6446 + T 100 -16.5 -4.64766 | opp_overlap 6417 6404 6403 ACGCAACACCAAAAA GGCCTTCGCTACG TAGC CGTAGTGGAGGCC TTTTTGACGTCTCCG pCM1_0008 6767 - 6465 - | hypothetical protein pCM1_0009 7012 - 8259 + | hypothetical protein pCM1_0010 8307 - 8693 + | hypothetical protein pCM1_0011 8702 - 9418 + | hypothetical protein TERM 5 10713 - 10659 - g 79 -14.7 -3.62046 | overlap 10660 10687 TGATGCGGCGAAGAA GGCGGCCGCGACCTCGGCCGCGAAG AAGGG CGCCGCTGCCGTGGCCACGGCCGGA ACCGGTGGAGCGGCG TERM 6 10712 - 10660 - g 74 -18.2 -2.77013 | overlap 10659 10687 GATGCGGCGAAGAAG GCGGCCGCGACCTCGGCCGCGAAG AAGGG CGCCGCTGCCGTGGCCACGGCCGG AACCGGTGGAGCGGC pCM1_0012 9421 - 10848 + | hypothetical protein pCM1_0013 10845 - 12527 + | hypothetical protein pCM1_0014 12524 - 14095 + | putative ATP/GTP-binding protein pCM1_0015 14110 - 15213 + | putative secreted protein pCM1_0016 15210 - 15665 + | hypothetical protein pCM1_0017 15659 - 16183 + | hypothetical protein pCM1_0018 16180 - 16938 + | putative secreted protein pCM1_0019 17403 - 16921 - | hypothetical protein celA 17651 - 19891 + | cellulase pCM1_0021 20350 - 20664 + | hypothetical protein TERM 7 20964 - 20907 - g 74 -16.9 -3.05463 | gap 1 ACCCGCTGCAGGGAA GGCGCTCGGCGCCGACGTCGCCGGGC TTGAGCT GCCCGGTGACGTCGGCGGCC-GCAAC GGCGGTCGCGAGCTG pCM1_0022 20749 - 21036 + | hypothetical protein ppaJ 21993 - 21052 - | putative extracellular serine protease pCM1_0024 23243 - 22677 - | hypothetical protein pin 23869 - 23240 - | DNA-invertase pCM1_0026 24714 - 24442 - | hypothetical protein pCM1_0027 24836 - 25072 + | hypothetical protein TERM 8 25432 - 25469 + G 72 -16.3 -2.87211 | gap 1, overlap 25434 GCCGGCGTGGACGTC GC-CGGCCGCGTGGATGG CCG CCGTCCATGCGGACGTGC TCTCTGCCGAGGGCT TERM 9 25434 - 25466 + G 74 -17.7 -2.69151 | overlap 25432 CGGCGTGGACGTCGC CGGCCGCGTGGATGG CCG CCGTCCATGCGGACG TGCTCTCTGCCGAGG TERM 10 26742 - 26770 + G 74 -16.8 -3.05384 | gap 1 GCGACGTCGTGCTGA CG-GATGCGGCCG GCGC CGGCCGCATCGCG TTCGCTCCCCCGGCC repA 25373 - 26899 + | putative replication protein SEQUENCE gi|148271110|ref|NC_009479.1| Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid pCM2, complete sequence (length 69989) TERM 1 1392 - 1370 - g 79 -18.4 -2.82015 | TCGACACCGACGAGA CGCGCCGCGC CGT GCGCGACGCG GACGACGATGCCGAG pCM2_0001 1 - 1539 + | hypothetical protein pCM2_0002 2021 - 1701 - | hypothetical protein pCM2_0003 2421 - 3329 + | hypothetical protein pCM2_0004 3847 - 3966 + | hypothetical protein ssb 4362 - 4739 + | hypothetical protein pCM2_0006 4742 - 5263 + | hypothetical protein pCM2_0007 5260 - 6033 + | hypothetical protein TERM 2 6284 - 6327 + G 83 -15.2 -3.67597 | GAAGGCGCCGCCGTT CGGCGCCGAGCTCGTCGTCG ATGC CGGTGGCGATCTCGATGCCG TTCTTGCCTCGCCCG pCM2_0008 6096 - 7049 + | hypothetical protein pCM2_0009 7265 - 7753 + | hypothetical protein pCM2_0010 8208 - 7774 - | hypothetical protein pCM2_0011 8311 - 8550 + | hypothetical protein pCM2_0012 8547 - 9269 + | hypothetical protein traA 9307 - 13785 + | putative conjugal transfer protein, Dtr system TERM 3 13797 - 13832 + T 93 -23.4 -2.62983 | opp_overlap 13801, overlap 13801 CTGACCCGCGCACGA TGAAGGCCGGGCACCT CATC GGGTGCCCGGCCTTCG TCGTGTGCGGGTCAG TERM 4 13828 - 13801 - T 87 -19.9 -3.21099 | opp_overlap 13797 13801 CCCGCGCACGATGAA GGCCGGGCACC TCATCG GGTGCCCGGCC TTCGTCGTGTGCGGG TERM 5 13801 - 13828 + T 87 -20.6 -3.24747 | opp_overlap 13801, overlap 13797 CCCGCGCACGATGAA GGCCGGGCACCT CATC GGGTGCCCGGCC TTCGTCGTGTGCGGG pCM2_0014 14287 - 13844 - | hypothetical protein traG 16043 - 14385 - | conjugal transfer protein TERM 6 14421 - 14455 + g 74 -17 -3.12749 | overlap 14425 GGGCCTCTCCGTGAT GGCCGCCGGCTCGGCC GCC GGCTCGGCCGCCGGCC TCTTCGGCTTCTTCG TERM 7 14425 - 14463 + g 81 -13.6 -3.70751 | overlap 14421 CTCTCCGTGATGGCC GCCGGCTCGGCCGCCGGC TCG GCCGCCGGCCTCTTCGGC TTCTTCGGCTTCTTC TERM 8 16119 - 16154 + r 73 -13.9 -3.28712 | opp_overlap 16108, overlap 16120 ACGAGCTGCCGTACG CGGCGCCGCGAGAGC CCGGCC GCTTCCGCGGCGCCC TTCTGCCCCAGAACC TERM 9 16120 - 16153 + r 75 -17.4 -2.57132 | opp_overlap 16108, overlap 16119 CGAGCTGCCGTACGC GGCGCCGCGAGAGC CCGGCC GCTTCCGCGGCGCC CTTCTGCCCCAGAAC pCM2_0016 17699 - 16650 - | hypothetical protein pCM2_0017 18181 - 17696 - | hypothetical protein TERM 10 17993 - 17978 - Gg 79 -11.8 -4.07568 | GTCGGGGCGGCAAAA CGCGGC CGCG GCCGCG AACGCCTGCGCGCGG pCM2_0021 19441 - 18191 - | putative ATPase pCM2_0018 17759 - 19210 + | putative ATPase pCM2_0022 20956 - 19451 - | putative ATP-binding protein pCM2_0023 22485 - 20956 - | hypothetical protein pCM2_0024 23770 - 22478 - | hypothetical protein pCM2_0025 24552 - 23767 - | putative secreted protein pCM2_0026 24899 - 24549 - | hypothetical protein pCM2_0027 25567 - 24899 - | hypothetical protein pCM2_0028 26822 - 25686 - | hypothetical protein pCM2_0029 27736 - 26819 - | hypothetical protein pCM2_0030 28952 - 28284 - | putative DNA-binding protein TERM 11 28377 - 28387 + g 79 -2.4 -4.83615 | CAGCTCATCGAGCGA ACGC GCG GCGA TTTTTGTAACGCCTA pCM2_0031 29624 - 29328 - | hypothetical protein TERM 12 29601 - 29566 - G 88 -19 -3.54129 | opp_overlap 29565 29566 29562, overlap 29570 CAGACGTCGCTTAAA CGAAGGAGCCCGCCGC TTCC GCGACGGGCTCCTGCA CGTGTTGTAGCTCTA TERM 13 29597 - 29570 - G 90 -20.6 -3.51232 | opp_overlap 29565 29566 29562, overlap 29566 CGTCGCTTAAACGAA GGAGCCCGCCGC TTCC GCGACGGGCTCC TGCACGTGTTGTAGC TERM 14 30611 - 30565 - g 84 -15.7 -3.7282 | gap 1, overlap 30568 CTACCGGACCAAGAA CACCGGCCGCGGCGGCCGCCGC ACCC GCAGC-GCCGCCGAGGCACGCG AGCGCCTCGAGCGGC TERM 15 30609 - 30568 - g 74 -18 -2.66249 | overlap 30565 CCGGACCAAGAACAC CG-GCCGCGGCGGCCGCCGC ACCC GCAGC-GCCGCCGAGGCACG CGAGCGCCTCGAGCG pCM2_0032 29687 - 31648 + | hypothetical protein parA 31937 - 32707 + | putative ATPase, partitioning protein TERM 16 33041 - 33022 - T 70 -2.8 -4.56597 | gap 1 GGCGTCGTCGAAAAA GCGATCCGT GAC ACGTA-CGC CGACCTATACGGCAG pCM2_0034 33681 - 33340 - | hypothetical protein TERM 17 33816 - 33776 - R 100 -32.1 -3.62522 | opp_overlap 33776 33779 33782, overlap 33779 33782 CAACTGGCCGAACAA CAAGAACAGCCCGCGCGCC GAC GGCGCACGGGCTGTTCTTG TTACATGACCGAGTT TERM 18 33776 - 33816 + r 100 -29.9 -3.05715 | opp_overlap 33776 33779 33782, overlap 33779 33782 CAACTGGCCGAACAA CAAGAACAGCCCGCGCGCC GAC GGCGCACGGGCTGTTCTTG TTACATGACCGAGTT TERM 19 33779 - 33813 + r 100 -25.8 -3.67597 | opp_overlap 33779 33776 33782, overlap 33776 33782 CTGGCCGAACAACAA GAACAGCCCGCGCGCC GAC GGCGCACGGGCTGTTC TTGTTACATGACCGA TERM 20 33813 - 33779 - R 100 -28 -3.9461 | opp_overlap 33776 33779 33782, overlap 33776 33782 CTGGCCGAACAACAA GAACAGCCCGCGCGCC GAC GGCGCACGGGCTGTTC TTGTTACATGACCGA TERM 21 33810 - 33782 - R 100 -23.9 -4.09963 | opp_overlap 33782 33779 33776, overlap 33779 33776 GCCGAACAACAAGAA CAGCCCGCGCGCC GAC GGCGCACGGGCTG TTCTTGTTACATGAC TERM 22 33782 - 33810 + r 100 -21.7 -3.97307 | opp_overlap 33779 33776 33782, overlap 33779 33776 GCCGAACAACAAGAA CAGCCCGCGCGCC GAC GGCGCACGGGCTG TTCTTGTTACATGAC rhsA 37405 - 34001 - | putative rhs related protein TERM 23 38455 - 38505 + r 73 -14.6 -3.23216 | gap 1, overlap 38458 GCGGTGTCGCCCGTC GACGCCGGCGGCGCCGTCGTGCG CGTGCT CGCGCGGCGGCTGCGCCCGC-TC TTGGTCGTGGTGACG TERM 24 38458 - 38503 + r 80 -17.4 -3.18023 | overlap 38455 GTGTCGCCCGTCGAC GCCGGCGGCGCCGTCGTGCG CGTGCT CGCGCGGCGGCTGCGCCCGC TCTTGGTCGTGGTGA TERM 25 39101 - 39059 - R 100 -23.7 -3.18582 | gap 2, opp_overlap 39067, overlap 39062 CAGCTGACCCACCAA CG-ATGAGAGGG-CCGACCCG TGC CGGGTCGGGCCCTCTCATGCG TACAGCTCGCTCTAG TERM 26 39097 - 39062 - R 95 -24.2 -2.79098 | gap 1, opp_overlap 39067, overlap 39059 CTGACCCACCAACGA TGAGAGGG-CCGACCCG TGC CGGGTCGGGCCCTCTCA TGCGTACAGCTCGCT TERM 27 39067 - 39092 + r 76 -16.9 -2.80816 | gap 1, opp_overlap 39062 39059 CCACCAACGATGAGA GGG-CCGACCCG TGC CGGGTCGGGCCC TCTCATGCGTACAGC pCM2_0036 39457 - 39113 - | hypothetical protein pCM2_0037 40263 - 39577 - | hypothetical protein pCM2_0038 40341 - 41342 + | hypothetical protein pCM2_0039 41500 - 42351 + | hypothetical protein TERM 28 42480 - 42491 + T 79 -5.8 -4.63586 | overlap 42475 CGGTTTGACTGGCGA GCAG CTGC CTGC TTTTATATGTCGTAT pCM2_0040 43211 - 42684 - | hypothetical protein pCM2_0041 43317 - 43886 + | hypothetical protein pCM2_0042 44636 - 45133 + | hypothetical protein pCM2_0043 45807 - 45301 - | hypothetical protein TERM 29 45463 - 45486 + g 74 -18.2 -2.71011 | GGTGGATTGCCAGCA GGGACGCTGC ACGC GCAGCGTCCC TGCTTCCGCGAGCAT pCM2_0044 46277 - 46672 + | hypothetical protein pCM2_0045 46761 - 46916 + | hypothetical protein pCM2_0046 46969 - 47142 + | hypothetical protein TERM 30 47626 - 47586 - T 71 -8.8 -4.15222 | overlap 47589 AGCCCGTCCAACAAA GTAGTACCGGCGTGGGTG TGCGC CGCCCCCACCGGTTCAAC GGGCCATGCGACCTC pCM2_0047 48534 - 47770 - | hypothetical protein pCM2_0048 49074 - 48889 - | hypothetical protein TERM 31 49317 - 49300 - H 100 -12.7 -5.14563 | overlap 49282 GCGGGCATGAAAAAA GCCAGCC CGCG GGCTGGC TAGAACGGAGGGGGG TERM 32 49484 - 49466 - H 78 -11.7 -3.90425 | GACGGAAACCAAGAA GGCCAGC ACGCA GCTGGCC TCAATGTGAGCGGAA pCM2_0049 49749 - 50327 + | hypothetical protein pCM2_0050 50621 - 50809 + | hypothetical protein pCM2_0051 51990 - 51643 - | hypothetical protein phpB 52940 - 52086 - | hypothetical protein TERM 33 52470 - 52454 - G 80 -3.5 -4.63932 | overlap 52455 TACGGCCTAAGAAAA CCTCGCC TAC GGCGCGC GGCTCGTAAGTCAAG phpA 53465 - 54298 + | putative extracellular serine protease TERM 34 55280 - 55291 + F 72 -3.6 -4.4648 | CATTATAACGTCACA CGGT CTAT GCCG TTTTATCGTGACGGT pat-1 55371 - 56213 + | hypothetical protein TERM 35 56640 - 56692 + T 80 -17.5 -3.16564 | GCCGGTTGCCGGTTG CCGGTTGCCGGTTGCCGGTTGCCGG TTG CCGGTTGCCGGTTGCCGGTTGCCGG TTGCTCGGGTGCCCG TERM 36 56694 - 56751 + T 100 -27.1 -2.6155 | gap 1, overlap 56717 TTGCCGGTTGCCGGT TGCTCGGGTGCCCGGGTGCCCGGG-TCC TCG GGAGCCCGTGTACACGGGCACCCGAGGA CTTAATGTTCGACGC TERM 37 56717 - 56752 + T 100 -24.8 -3.36273 | overlap 56694 TGCCCGGGTGCCCGG GTCCTCGGGAGCCCGT GTAC ACGGGCACCCGAGGAC TTAATGTTCGACGCG TERM 38 57734 - 57754 + T 74 -9.7 -4.12188 | overlap 57706 57705 TGCTAGTGCGATGCC CGTGACAGT CTT GCTGTCGCG TTTTGGGGGTGGTCA TERM 39 59726 - 59743 + T 70 -4.1 -4.40358 | gap 1 GAGGCAACCCACGGC CGC-TGCG TAG CGTATGCG TTTTGTGGACTGGCT pCM2_0055 61455 - 60511 - | hypothetical protein pCM2_0056 62452 - 61448 - | putative transcriptional regulator pCM2_0057 63833 - 63216 - | hypothetical protein pCM2_0058 64526 - 63936 - | hypothetical protein pCM2_0059 64866 - 65033 + | hypothetical protein pCM2_0060 65036 - 65257 + | hypothetical protein TERM 40 65266 - 65297 + F 93 -19.4 -3.494 | opp_overlap 65268 GGGATAGCACCTCAA GAGCGGCCGGCACC TTCG GGCGTCGGCCGCTC TTCTCTGCCGCCTTC TERM 41 65295 - 65268 - f 75 -16.2 -3.0752 | opp_overlap 65266 GATAGCACCTCAAGA GCGGCCGGCACC TTCG GGCGTCGGCCGC TCTTCTCTGCCGCCT pCM2_0061 66023 - 66310 + | hypothetical protein pCM2_0062 66549 - 66364 - | hypothetical protein pCM2_0063 66933 - 66598 - | hypothetical protein pCM2_0064 67041 - 67535 + | hypothetical protein pCM2_0065 67655 - 67864 + | hypothetical protein pCM2_0066 67890 - 68732 + | hypothetical protein pCM2_0067 69233 - 68844 - | hypothetical protein pCM2_0068 69568 - 69233 - | hypothetical protein pCM2_0069 69903 - 69586 - | hypothetical protein TERM 42 69735 - 69751 + g 90 -11.5 -4.59773 | overlap 69736 CGCGGCACCCCTCTC TGGGCCC TGC GGGCCCG TTTTTGGCCGTGAAG TERM 43 69736 - 69750 + g 70 -12.8 -3.35542 | overlap 69735 GCGGCACCCCTCTCT GGGCCC TGC GGGCCC GTTTTTGGCCGTGAA SEQUENCE gi|148271178|ref|NC_009480.1| Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete genome (length 3297891) TERM 1 817 - 792 - g 73 -10.5 -3.85864 | gap 1 GCACGACCACAACAA GCAGGTCG-TCA TCA CGAGCGACCTGC CGCCGAAGCACCTCA dnaA 1 - 1434 + | chromosomal replication initiator protein dnaA TERM 2 1513 - 1484 - f 84 -19.3 -2.81642 | opp_overlap 1486, overlap 1486 ACATCAGGCAGCAGA GAGGGGTCGGACC ACCA GGTCCGGCCCCTC TCTGCATGTGCGGGC TERM 3 1486 - 1511 + F 80 -18.3 -2.93382 | opp_overlap 1484 1486 ATCAGGCAGCAGAGA GGGGTCGGACC ACCA GGTCCGGCCCC TCTCTGCATGTGCGG TERM 4 1511 - 1486 - f 73 -16.1 -2.95476 | opp_overlap 1486, overlap 1484 ATCAGGCAGCAGAGA GGGGTCGGACC ACCA GGTCCGGCCCC TCTCTGCATGTGCGG dnaN 1978 - 3129 + | DNA polymerase III subunit beta gndA1 3150 - 4037 + | 6-phosphogluconate dehydrogenase-like protein recF 4045 - 5259 + | recombination protein F CMM_0005 5256 - 5768 + | hypothetical protein TERM 5 7058 - 7007 - g 71 -13 -3.48684 | gap 1, opp_overlap 7022, overlap 7001 6998 CGAGAAGGACGAGAA CCTCACGGGCGACGACGTCCGCGAG GGC CTCACGGCCGTCATCTCG-GTGAAG CTCGGCGAGCCGCAG gyrB 5958 - 8003 + | DNA gyrase subunit B TERM 6 9310 - 9252 - g 72 -13.9 -3.41051 | gap 1 GCAGCTGCAGGAGAA CTTCG-GCGCGAACATGCTGGCGATC GTCGACGG GATCCCCCGCACGCTCGCGCTCGACG GCTTCATCTCGGCGT gyrA 8086 - 10773 + | DNA gyrase subunit A CMM_0008 10766 - 11173 + | putative integral membrane protein TERM 7 11219 - 11188 - T 78 -12.2 -3.87815 | GCCGATTGGGAGAAA CGGGCAGGCGTACG GTAA CGTGTACCTGCCCG ATGGGGATATAGCTC TERM 8 11328 - 11300 - T 73 -14.6 -3.15544 | overlap 11302 TGGTATCCCCACCAA CACCCCCGGATC CGCAC GATCCGGGGGCA TGGCGGGCATCGAGT TERM 9 11326 - 11302 - T 80 -17.2 -3.14051 | overlap 11300 GTATCCCCACCAACA CCCCCGGATC CGCAC GATCCGGGGG CATGGCGGGCATCGA TERM 10 11601 - 11566 - T 100 -29.2 -2.62184 | opp_overlap 11570, overlap 11570 CCGTCGGGGATACGA CGAAGCCCCGGACACC GAGA GGTGTCCGGGGCTTCG TCGTGAGCGGTGCGG TERM 11 11597 - 11570 - T 93 -22.8 -3.24747 | opp_overlap 11570, overlap 11566 CGGGGATACGACGAA GCCCCGGACACC GAGA GGTGTCCGGGGC TTCGTCGTGAGCGGT TERM 12 11570 - 11597 + T 93 -22.8 -3.21218 | opp_overlap 11570 11566 CGGGGATACGACGAA GCCCCGGACACC GAGA GGTGTCCGGGGC TTCGTCGTGAGCGGT CMM_0009 12258 - 11620 - | hypothetical protein ppiA 12368 - 12907 + | peptidyl-prolyl cis-trans isomerase CMM_0011 12907 - 13770 + | hypothetical protein TERM 13 13785 - 13810 + T 87 -19.7 -3.21099 | overlap 13807 ACCGATCCCGACGTG CGCGCCGCCCT GCAC GGGGCGGCGCG TTCGTCGTGCCCGCC TERM 14 14145 - 14115 - T 100 -21.3 -3.35679 | opp_overlap 14117 TGGCCGGATGCAGAA GAGCCCGTCACCA GCTGA TGGTGACGGGCTC TCGTGATCGCGCTGG TERM 15 14117 - 14143 + T 79 -18.1 -2.82635 | opp_overlap 14115 GCCGGATGCAGAAGA GCCCGTCACCA GCTGA TGGTGACGGGC TCTCGTGATCGCGCT CMM_0012 14402 - 14163 - | hypothetical protein TERM 16 14763 - 14708 - g 76 -15.2 -3.33492 | gap 1 CCAGGCACTGGAGAA CAGCCGGAGCTGG-GCCACGGCCGCGC CGG ACGCGGCGGCGTCACCCGACCCGGCCG CCACGCCCGCGGCAC CMM_0013 14508 - 15308 + | putative sortase pabA 15466 - 16104 + | para-aminobenzoate synthetase component II pknB 17966 - 16218 - | hypothetical protein pknA 20008 - 18101 - | hypothetical protein pbpA 21456 - 20005 - | penicillin-binding protein ftsW1 22850 - 21453 - | putative cell division membrane protein CMM_0019 24105 - 22843 - | putative serine/threonine protein phosphatase CMM_0020 24694 - 24110 - | hypothetical protein CMM_0021 25422 - 24691 - | hypothetical protein TERM 17 25740 - 25717 - H 90 -21 -2.83715 | opp_overlap 25717 CGCACCAGCACGAGA GGCCCCCGGG TTCA CCCGGGGGCC TCTTCGCGTCTCCGT TERM 18 25717 - 25740 + H 93 -21 -3.0814 | opp_overlap 25717 CGCACCAGCACGAGA GGCCCCCGGG TTCA CCCGGGGGCC TCTTCGCGTCTCCGT CMM_0022 25879 - 28146 + | hypothetical protein CMM_0023 28143 - 28829 + | putative two-component system response regulator CMM_0024 28837 - 29955 + | putative two-component system sensor kinase rpmJ 30117 - 29995 - | 50S ribosomal protein L36 CMM_0026 30162 - 31235 + | hypothetical protein recQ1 31412 - 33178 + | ATP-dependent DNA helicase CMM_0028 33175 - 33420 + | hypothetical protein glsA 33677 - 34654 + | putative glutaminase CMM_0030 35723 - 34674 - | putative hydrolase/acyltransferase CMM_0031 35841 - 36227 + | hypothetical protein CMM_0032 36305 - 37552 + | hypothetical protein CMM_0033 37958 - 37569 - | hypothetical protein CMM_0034 40054 - 40860 + | putative sugar phosphate isomerase/epimerase CMM_0035 40857 - 41966 + | putative dehydrogenase/oxidoreductase CMM_0036 42124 - 43209 + | LacI family transcriptional regulator CMM_0037 45899 - 45327 - | hypothetical protein TERM 19 47596 - 47632 + r 100 -31.7 -3.29263 | TGCATGTATTCGTAG GCGGCGTCGTGGCGGCT GCC GGCCGCCACGACGCCGC TTCTGCCCCACATCT CMM_0038 48292 - 47879 - | hypothetical protein chpE 49567 - 48734 - | serine protease CMM_0040 50104 - 49775 - | hypothetical protein ppaA 50376 - 51356 + | putative extracellular serine protease TERM 20 51459 - 51492 + T 79 -18.1 -2.7035 | opp_overlap 51460, overlap 51456 GGTAGGAGCAACGGA ACGGGGCTCAGGCTC GACT GTGCCTGAGCCCCGC TGGTGTGTCGCTAGG TERM 21 51491 - 51460 - T 93 -21.6 -3.21695 | opp_overlap 51459 51456 GTAGGAGCAACGGAA CGGGGCTCAGGCTC GACT GTGCCTGAGCCCCG CTGGTGTGTCGCTAG ppaB1 52507 - 51503 - | putative extracellular serine protease pelA1 52708 - 53559 + | hypothetical protein ppaC 54896 - 53883 - | putative extracellular serine protease TERM 22 55073 - 55129 + r 73 -16 -2.87211 | opp_overlap 55059 55056, overlap 55075 ACGGCGGAAGCCCGC CAGCCGTGCTCGCGCCGTGATG-GCGAA GCC TTCGCTCATAA-GGGGCGAGCCTGGCTG TCTATGCGGCCAGGT CMM_0045 57396 - 57043 - | hypothetical protein TERM 23 58773 - 58808 + H 73 -6.1 -4.46212 | overlap 58776 GTAGGAGTGTCACAT CCGCTCCGTCGGT TGGATTGTTT ACCGACGGGGTAG TTTTATCATCAAAAC TERM 24 58899 - 58947 + H 77 -6.8 -4.58085 | gap 1, overlap 58896 AGAGCGCTCGCTCGT GGCCTGTCTCGGGCGCTACGT TCTAGTTC ATGTGGCGCAT-AGATAGGCC TTTGTTTGTGGCTGT TERM 25 61553 - 61569 + H 70 -2.1 -4.58395 | overlap 61554 GGCGAGCCGTTTCCT GCCTCCG GCA CAGAGGG TTTTTCCAAGCTGCA CMM_0046 61909 - 62718 + | hypothetical protein CMM_0047 63748 - 63422 - | hypothetical protein CMM_0048 64995 - 64558 - | hypothetical protein TERM 26 65677 - 65694 + G 85 -7.7 -4.63218 | ACCTGACAACGGTAG CTCCTTC AGCC GAAGGGG TTTTCTTACCGCCGC TERM 27 66028 - 65989 - g 71 -13.6 -3.48276 | gap 1, overlap 65995 CTTCGCCGGAGAGAA GGACAACCTCGTCGACCCG CGG CAGATCG-CGCGGCTGTCC GGCGACTTGCAGCGT nagA 65645 - 67468 + | putative beta-N-acetylglucosaminidase TERM 28 67859 - 67818 - T 100 -16 -4.72272 | gap 1, opp_overlap 67818 67822, overlap 67822 TGCCCGCAGGAAAAA CGAAGCGGGGCTCAGAC TCTGACTTC GCCTGAGCCCCGCT-CG TGTGTGGGTCCCCGT TERM 29 67856 - 67822 - T 90 -16.5 -3.84901 | opp_overlap 67818 67822, overlap 67818 CGCAGGAAAAACGAA GCGGGGCTCAGAC TCTGACTTC GCCTGAGCCCCGC TCGTGTGTGGGTCCC ppaB2 68886 - 67885 - | putative extracellular protease pelA2 69085 - 69936 + | hypothetical protein chpC 71645 - 70785 - | serine protease TERM 30 71624 - 71635 + g 80 -3.6 -4.67234 | CAATAAAGTAAATAC CGCG AAAA TGCG TTTTTGACATTGAAT chpF 74779 - 75633 + | serine protease CMM_0054 77545 - 76541 - | hypothetical protein CMM_0055 78542 - 77538 - | hypothetical protein CMM_0056 79756 - 79094 - | hypothetical protein TERM 31 79986 - 79946 - R 80 -18.5 -2.92442 | overlap 79941 AGCGAAGACATGAGA CGACCCCGCAA-GCTGCGG GCGAG CCG-AGCGTTGCGGGGTCG AAGTACCGGTTGGCA TERM 32 80433 - 80457 + r 71 -16.4 -2.62616 | CCCCGCCGCAGGGCG GTCGGCGCCC CTCGT GGGCGCCGGC TGCTCTCGGCAGTGG TERM 33 80602 - 80641 + r 100 -29.4 -3.21747 | opp_overlap 80604, overlap 80605 ATCTGGGGTCCAATG CACGAGCGGCCGGGACCC TGGT GGGTCCCGGCCGCTCCTG TTCGTACTCGCCTAG TERM 34 80639 - 80604 - R 95 -26.2 -2.52464 | opp_overlap 80602 80605 CTGGGGTCCAATGCA CGAGCGGCCGGGACCC TGGT GGGTCCCGGCCGCTCC TGTTCGTACTCGCCT TERM 35 80605 - 80638 + r 100 -29.7 -2.50016 | opp_overlap 80604, overlap 80602 TGGGGTCCAATGCAC GAGCGGCCGGGACCC TGGT GGGTCCCGGCCGCTC CTGTTCGTACTCGCC CMM_0057 80916 - 80653 - | hypothetical protein TERM 36 80959 - 80979 + H 85 -4.6 -4.96657 | overlap 80961 TGGGTGCGGAAAGGC CGTGCCCT GATGA GGGGCAGG TTTTCTTATATTTCT TERM 37 81625 - 81603 - H 73 -10.5 -3.77832 | opp_overlap 81623 TCTTAAAGCGAAGAA CCCCACCGA GGTCG TCGGAGGGG AGCTCAGCATCCTTG CMM_0058 82453 - 82716 + | hypothetical protein TERM 38 82719 - 82765 + F 78 -12 -3.89346 | GCCCGACGCATGATC CGGTGAAGGCGGGAGGGGAGGC CAT GTCGCCCCTCCCGCCGCGGGCG TTTGTCACGTCCCAC chpG 82939 - 83772 + | putative extracellular serine protease CMM_0060 85126 - 85584 + | hypothetical protein CMM_0061 85938 - 86894 + | putative cell filamentation protein TERM 39 87022 - 87075 + F 73 -15.7 -2.87931 | overlap 87025 GCGGGCGACGCTTGG GCGGAGCCGCGATGCGGCGCTGTTG GCCT CATCTGTGCCGCTGCGCGGCGCCCC TCTCTGGGCCCTGCG TERM 40 87080 - 87096 + F 100 -11.5 -5.03314 | overlap 87081 CGCGGCGCCCCTCTC TGGGCCC TGC GGGCCCG TTTTTTGGCCGTGAA TERM 41 87081 - 87095 + F 75 -12.8 -3.61506 | overlap 87080 GCGGCGCCCCTCTCT GGGCCC TGC GGGCCC GTTTTTTGGCCGTGA TERM 42 87308 - 87296 - f 74 -2.6 -4.62471 | GCTAAGGCGTAAAAA CGCC TTCAC GGCA AAAAAACGAGTGGAA TERM 43 88726 - 88706 - f 81 -16.1 -3.44206 | CAACACCGACGAGAA GCGCCGCGC CGC GCGCGACGC GGACGACGATGCCGA CMM_0062 91403 - 91792 + | hypothetical protein CMM_0063 92168 - 92875 + | hypothetical protein CMM_0064 93639 - 92944 - | putative hydrolase CMM_0065 94533 - 93727 - | putative phosphotransferase parX 94677 - 95309 + | partitioning protein CMM_0067 96096 - 97265 + | putative ATPase TERM 44 97287 - 97257 - f 70 -12.5 -3.41125 | overlap 97250 TTCATAGAGCGACAA CCCGCCTGACGCC TGAAG GGCCTGAGGCGGG GGAGTGGGCCATTGA CMM_0068 97383 - 97616 + | hypothetical protein nhaA1 98977 - 97673 - | NahA family Na(+)/H(+) antiporter TERM 45 98164 - 98135 - G 80 -4.1 -4.65895 | gap 1, overlap 98137 GCGCTCAGCGAAAAA GTGCGTGA-GCGCG TGC CGCTCCTCGCGCCC GGCGGTGCCGCGGTG TERM 46 99535 - 99481 - R 72 -3.9 -4.56597 | opp_overlap 99483, overlap 99482 99483 CGGGCCGGTCAAAAA GCCCGCACGGTGGCCGTGAGTCCGC GTTAG GCGTCGTTCCGGCCACCGCGCAGTG TCGTGCAGCGCAGAT sbtA 102741 - 99640 - | subtilisin-like serine protease TERM 47 103279 - 103238 - R 100 -26.7 -3.02263 | overlap 103226 ATACCTCCTGGAACA GGGGTGAAGGGGAGGACGC AAGT GTGCCCTCCCCTTCACCCC ATCACGGGATACCTC ppaE 104384 - 103428 - | hypothetical protein TERM 48 104788 - 104817 + r 72 -5.8 -4.46212 | gap 3, opp_overlap 104788, overlap 104788 GGTGCGTATGAATGA CCC-GATGCGCACGC CTC GCG-GCG-ATCAGGG TTTTCTCGTCCCGCC TERM 49 104887 - 104867 - R 81 -12.5 -3.93664 | overlap 104869 ACCGAAGAGACCAAA GAGACCGCG GAT CGCGGTCGC GAGAACGCCTGCAGC TERM 50 104885 - 104869 - R 75 -13.7 -3.55205 | overlap 104867 CGAAGAGACCAAAGA GACCGCG GAT CGCGGTC GCGAGAACGCCTGCA CMM_0072 106863 - 106123 - | hypothetical protein CMM_0073 107334 - 108860 + | putative acyl-CoA synthetase (AMP-forming) TERM 51 110621 - 110669 + F 95 -17.1 -4.26076 | gap 3 GATTTGTGCCGCGTG TGGTCGCGTGAGAA-TC-CGAGGT GATA ACC-CGAGAATTCTCACGCGACCA TTTTCATCGACATGC CMM_0074 112168 - 112389 + | hypothetical protein TERM 52 112400 - 112427 + T 100 -20.6 -3.96216 | opp_overlap 112392 GATAGCACCGCACGA GCGGCCGGCACC TTCC GGTGTCGGCCGC TTCTTTAGCTGCCGC ppaD 114005 - 113031 - | putative extracellular serine protease TERM 53 115085 - 115053 - g 70 -13.3 -3.32844 | overlap 115029 115055 115057 CGCGTCATCCCAGAA GACAGCGGCCTCGCC GTA GGCGACGCCGCCAGC CCCCTCGACGCCTCC TERM 54 115083 - 115055 - g 70 -14.5 -3.23393 | overlap 115029 115053 115057 CGTCATCCCAGAAGA CAGCGGCCTCGCC GTA GGCGACGCCGCCA GCCCCCTCGACGCCT TERM 55 115081 - 115057 - g 74 -17.1 -3.18118 | overlap 115029 115055 115053 TCATCCCAGAAGACA GCGGCCTCGCC GTA GGCGACGCCGC CAGCCCCCTCGACGC TERM 56 115224 - 115208 - g 80 -3.5 -4.70626 | overlap 115209 115210 GAACAACTTCAAAAA CTCCGCC CCT GGCGGCC TCACTGTCACCTTGC CMM_0076 114879 - 115307 + | hypothetical protein TERM 57 115696 - 115715 + T 70 -2.1 -4.52589 | ATAAAGGTTATTCTA GATCGTG CCCCTC CGTGATC TTTTGTATCGCCAGG TERM 58 115898 - 115881 - T 78 -9.1 -4.36914 | overlap 115884 115885 CCGTCGCCGACAAAA CCAGCAC GTGG GCGCTGG CCACGTCGACGCAAC CMM_0077 117137 - 116970 - | hypothetical protein CMM_0078 117213 - 118871 + | putative NADH oxidase CMM_0079 118888 - 119187 + | hypothetical protein CMM_0080 119184 - 119501 + | hypothetical protein CMM_0081 120527 - 119736 - | putative short-chain dehydrogenase/reductase bglB 122925 - 120538 - | putative beta-glucosidase TERM 59 122843 - 122793 - G 83 -21.2 -2.63631 | gap 1, opp_overlap 122750 CGAAGGGTGAGACCA GCTGCGCCG-CCTTCTCGGCCGC GGTCAT GCGACCGAGAAGGTCGGCGATGC GCTCCACGACGGGGC bglC 124908 - 123070 - | putative beta-glucosidase/beta-xylosidase CMM_0084 125889 - 124978 - | putative sugar ABC transporter, permease component CMM_0085 126968 - 125886 - | putative sugar ABC transporter, permease component CMM_0086 128320 - 127043 - | putative sugar ABC transporter, binding protein TERM 60 128584 - 128623 + G 77 -17.9 -3.02511 | gap 1 CCGTACCGCAAGGGT GTGGAGC-GCCGCCGCGA GATCG TCGCGGCGGCGGCTCAGC TGTTCAGCGAATCCG CMM_0087 128542 - 129288 + | TetR family transcriptional regulator bglA 130822 - 129377 - | putative beta-glucosidase catR 131048 - 132076 + | LacI family transcriptional regulator TERM 61 132109 - 132136 + T 73 -11.2 -3.85698 | opp_overlap 132109 CATGGTGACGAGGAA CCGCCCGATGAC GGGA GTCACCAGGCGG TTTCTCGAGGGGGGA TERM 62 132136 - 132109 - T 76 -15.6 -3.21416 | opp_overlap 132109 CATGGTGACGAGGAA CCGCCCGATGAC GGGA GTCACCAGGCGG TTTCTCGAGGGGGGA tomA 133801 - 132170 - | tomatinase, endo-1,4-beta-glycosidase regB 134811 - 134140 - | putative two-component system response regulator regA 135962 - 134808 - | putative two-component system sensor kinase TERM 63 135809 - 135850 + g 83 -20.1 -2.87132 | overlap 135812 GCCGCCGTATCGCGA CGAGCGCCGCGCTCACCAC AGTG GCGGTGAGCGCGGCGATCC TGTCTACCCCGCCGA TERM 64 135812 - 135847 + g 82 -20.4 -2.69151 | overlap 135809 GCCGTATCGCGACGA GCGCCGCGCTCACCAC AGTG GCGGTGAGCGCGGCGA TCCTGTCTACCCCGC CMM_0093 138130 - 135959 - | RND family transporter TERM 65 135992 - 136049 + g 73 -15.5 -3.28791 | gap 1, overlap 135992 CAGCTCATTCGGGGC G-GCCTCACGACGGTCGTCGTCGAAGGC GGC GCCCTCGACGTCGATCGTCGGCAGGAGC TTGTCGAGCCAGCGT TERM 66 136236 - 136216 - G 70 -12.5 -3.42069 | overlap 136214 CGAATCCGAAGAAGA CCGCGGCCA TGA TCGCCGCGG CAGCGACCACGACAG cytA 138337 - 139557 + | putative cytochrome P450 cytB 139554 - 139751 + | putative 3Fe-4S ferredoxin cytC 139748 - 140950 + | putative ferredoxin reductase TERM 67 141002 - 140953 - T 76 -16.6 -2.78384 | overlap 140955 CGCTGCTCCATGAGA GAGGCCGGCGGGAAGGGAAG-TCG TACA CGATCTCCCCTTCCCGTCA-CCTC ATCACCTCAGGCGCG bglD 143633 - 141009 - | glycosyl hydrolase family beta-glucosidase CMM_0098 144755 - 143748 - | LacI family transcriptional regulator bglE 144980 - 147469 + | hypothetical protein bglF 147484 - 149739 + | beta-galactosidase bglG 149904 - 151076 + | beta-galactosidase TERM 68 151579 - 151560 - g 72 -13.6 -3.37796 | TCGCATCACGGAGAA GGACCGTG ATGG CACGGTCC TGATGGTGCAGATCG bglH 151096 - 152694 + | putative beta-galactosidase bglI 154494 - 152728 - | beta-xylosidase glycosyl hydrolase family 43 CMM_0104 154629 - 156008 + | sugar permease TERM 69 157709 - 157697 - g 80 -10.5 -4.10161 | GAGCAGCGTCGAAAA GCCGG CGA CCGGC TCGCTGAGCTCGTAG ramA 156005 - 158506 + | putative alpha-rhamnosidase aglA 161624 - 159396 - | alpha-xylosidase YicI CMM_0107 162659 - 161748 - | putative sugar ABC transporter, permease compound CMM_0108 163621 - 162659 - | putative sugar ABC transporter, permease component TERM 70 163527 - 163501 - G 73 -16.6 -3.03159 | overlap 163490 163525 GGAACGCGGCGAACA GGATGATCGCCG GTG CGGCGAACATCC ACGGTGTCAGCGCTC CMM_0109 165053 - 163695 - | putative sugar ABC transporter, binding protein CMM_0110 165201 - 166802 + | xylosidase glycosyl hydrolase family protein CMM_0111 166885 - 167691 + | putative sugar phosphate isomerase/epimerase CMM_0112 167688 - 168797 + | putative dehydrogenase/oxidoreductase CMM_0113 168891 - 169622 + | putative hydrolase CMM_0114 169619 - 170332 + | hypothetical protein CMM_0115 170415 - 171371 + | hypothetical protein CMM_0116 171496 - 172086 + | putative dienelactone hydrolase CMM_0117 173580 - 172096 - | putative MFS-type efflux protein TERM 71 172848 - 172813 - G 70 -13.8 -3.21099 | overlap 172764 CTCGCGGAGGACGAA GCCCGCGACCGCGGCG ACGG CGCCGAGCGCGCAGGC GAGCGTGACGGGGGC TERM 72 173413 - 173467 + g 95 -22.8 -3.30771 | overlap 173416 CCACTGGAGCCCCGT CGTGCCGCTGTCGAGCGCGCGCCCGA TCG TCGGCAGCGCGATCGACAGCAGCGTG TTGTCGACCATCTCG TERM 73 173416 - 173464 + g 89 -23.1 -2.5294 | overlap 173413 CTGGAGCCCCGTCGT GCCGCTGTCGAGCGCGCGCCCGA TCG TCGGCAGCGCGATCGACAGCAGC GTGTTGTCGACCATC TERM 74 173746 - 173697 - g 70 -16.9 -2.66787 | overlap 173688 CGAAGACGGAGAGCA CCCGCACGCCGCCCGCCCGCGCC CGAG GGCGCCAGCGGGCGTCGCACTCG CTCGACACCGTGCTG CMM_0118 173663 - 174409 + | TetR family transcriptional regulator CMM_0119 175130 - 174435 - | TetR family transcriptional regulator uahA 178837 - 175154 - | putative urea amidolyase CMM_0121 179526 - 178834 - | hypothetical protein TERM 75 179122 - 179168 + g 72 -16.5 -2.79183 | overlap 179120 179156 GTACGCGGTGTGGTG CCCGTAGCGGAGCGTGTTCGA CTCCT TCGAGCACGCGCCGCCGAGGG TGTCCTGGCGGTCGA CMM_0122 180365 - 179523 - | hypothetical protein CMM_0123 181945 - 180362 - | amino acid permease APC family CMM_0124 185590 - 182195 - | putative acyl-CoA synthetase CMM_0125 186320 - 185595 - | putative 4-phosphopantetheinyl transferase TERM 76 185916 - 185861 - G 74 -17.5 -2.73875 | gap 1, overlap 185858 CGGCGGCGAAGAGCA CGCTGCCGGGGGCCTCGACCCCGGTC GCCCG GAGCGCG-TCGAGGCCCGCGGCGACG GGCGCGCTGCCGAGG CMM_0126 187316 - 186504 - | hypothetical protein sigX 187864 - 187313 - | RNA polymerase ECF-subfamily sigma factor CMM_0128 188085 - 188795 + | hypothetical protein CMM_0129 188801 - 189469 + | putative sortase CMM_0130 189755 - 189495 - | hypothetical protein CMM_0131 190011 - 189769 - | hypothetical protein CMM_0132 191409 - 190129 - | hypothetical protein CMM_0133 191551 - 192192 + | putative pyroglutamylpeptidase CMM_0134 192438 - 193625 + | hypothetical protein CMM_0135 194973 - 193999 - | hypothetical protein CMM_0136 196007 - 194970 - | hypothetical protein CMM_0137 197721 - 196333 - | putative MFS transporter CMM_0138 197794 - 198540 + | hypothetical protein CMM_0139 198928 - 198545 - | hypothetical protein CMM_0140 199437 - 198943 - | hypothetical protein CMM_0141 199666 - 200331 + | putative secreted protein CMM_0142 200413 - 201393 + | hypothetical protein CMM_0143 201390 - 202232 + | hypothetical protein CMM_0144 203268 - 202285 - | hypothetical protein TERM 77 203561 - 203605 + r 88 -21.5 -2.62396 | opp_overlap 203571, overlap 203571 203602 CGTCGACCGGCGGGC GCACGACGAACGGCCCGGC GTCGTGG GCCGGGCCGTTCGTGGTGG TGCTGTCCCGGGGTC TERM 78 203571 - 203595 + r 76 -15.7 -3.23692 | opp_overlap 203571, overlap 203561 CGGGCGCACGACGAA CGGCCCGGC GTCGTGG GCCGGGCCG TTCGTGGTGGTGCTG TERM 79 203595 - 203571 - R 76 -15.7 -3.21099 | opp_overlap 203571 203561 CGGGCGCACGACGAA CGGCCCGGC GTCGTGG GCCGGGCCG TTCGTGGTGGTGCTG CMM_0145 204329 - 203637 - | hypothetical protein CMM_0146 205099 - 204455 - | putative peptidase CMM_0147 205731 - 205099 - | hypothetical protein CMM_0148 206537 - 205728 - | hypothetical protein CMM_0149 207351 - 206653 - | hypothetical protein TERM 80 207006 - 207044 + g 84 -21.1 -2.80935 | gap 1 CCGTCACCAGCGACT CGCTCGG-GCCGGGGACC GCCG GGTCCTCGGTGCCGAGCG TCTCGTCGGTCACCT TERM 81 207250 - 207307 + g 79 -14.2 -3.61398 | gap 3, opp_overlap 207246, overlap 207253 GTCGGTGAAGATGGC GAACG-CGCCGCCGGTGATGATCGT-GCC CAC GGCGACGACCG-CGCCGGTGGCGACGATC TTCTTCCAGGGGCGA CMM_0150 210902 - 207498 - | putative cell wall surface anchor family protein TERM 82 212986 - 212959 - g 73 -17 -3.02511 | TCGACGGCCTGAAGA GCGCCCTCGCCG GCGA CGACGAGGACGC GGTCAAGACCGCCTT dnaK 211308 - 213179 + | molecular chaperone DnaK TERM 83 213626 - 213577 - g 77 -16.3 -3.29144 | gap 1 CGACCGGGCCGAGAA GCACGGCGAC-CTCGCGGAGGGCG GAC CGCTCACCGCGATCGTCGCCAAGC TGCGGACGAACGTGG grpE 213176 - 213829 + | heat shock chaperone dnaJ1 213950 - 214963 + | chaperone, curved DNA-binding protein hspR 214965 - 215438 + | heat shock transcriptional regulator CMM_0155 215435 - 216658 + | putative methyltransferase CMM_0156 216711 - 217151 + | hypothetical protein CMM_0157 217419 - 217183 - | Cro/CI family transcriptional regulator CMM_0158 218057 - 217419 - | hypothetical protein CMM_0159 218584 - 218138 - | hypothetical protein TERM 84 218438 - 218471 + g 70 -12.5 -3.36327 | gap 1, opp_overlap 218423, overlap 218441 218443 CTTGCCGTCGCGGTG CAGC-AGCAGGCCGGT GAG GCCGGTCTGCTCGTTG TTGTGGATGCACTGG TERM 85 218441 - 218468 + g 71 -10.6 -3.8211 | gap 1, opp_overlap 218423, overlap 218438 218443 GCCGTCGCGGTGCAG C-AGCAGGCCGGT GAG GCCGGTCTGCTCG TTGTTGTGGATGCAC TERM 86 218730 - 218692 - R 86 -18.1 -3.4252 | gap 1 CCGGACCGATGACAA GAGCCCGGCGCGTCCACG GGTA CGGCG-CGCGCCGGGCTC CTGCTGCTGCCGCGT CMM_0160 219702 - 218974 - | hypothetical protein CMM_0161 220895 - 219867 - | LacI family transcriptional regulator TERM 87 220342 - 220393 + g 76 -17.3 -2.79183 | gap 3 GTGAGCACTGCGACG CGGC-GGTGGCCGAGGG-ACGCC-AC GTG GTCGGCGAGCCCGCGGCCGCCCGCCG TCTCGTCGCAGTAGA CMM_0162 222105 - 221482 - | hypothetical protein CMM_0163 222222 - 223250 + | hypothetical protein TERM 88 224189 - 224237 + G 89 -20.2 -3.30441 | gap 1 CTCGTCGACGCGCGC GCCGGCGCGGCGG-CGGCCGGTG CTCC CGCGGGCTGATCGCCGCCCCGGC TTGTCGCGGGTGATG CMM_0164 223454 - 224224 + | hypothetical protein fhuC 224275 - 225177 + | putative Fe3+-siderophore ABC transporter,ATPase component fhuD 225174 - 226163 + | putative Fe3+-siderophore ABC transporter,binding protein fhuB 226198 - 228354 + | iron-hydroxamate transporter permease subunit CMM_0167a 228475 - 228960 + | hypothetical protein CMM_0168 229937 - 231484 + | putative two-component system sensor kinase CMM_0169 231511 - 232173 + | putative two-component system response regulator CMM_0170 232240 - 232644 + | putative tautomerase CMM_0171 233180 - 232668 - | putative acetyltransferase CMM_0172 234946 - 233252 - | hypothetical protein TERM 89 233629 - 233678 + g 72 -11.9 -3.61715 | overlap 233671 GGCCGGAGATCGTGG CGCGGCCGTTGACGAGGTCGACG CTCA CGCCGTCCTCGATGACGAGCGCG TTCTTCACGCCCGTG sulP 235445 - 236977 + | putative sulfate MFS permease mntA 237698 - 237042 - | putative Mn2+/Zn2+ ABC-type transporter, ATPase component TERM 90 237287 - 237230 - G 79 -16.8 -3.40403 | gap 1 GCTCGTCGAGGAGAA GGAGGCCGGC-GCCGCGGGCGATGCCC TGCGC GAGCAGCGCGCGCTGCCGCTGGCCGCC CGAGAGCGCGGCGAA TERM 91 238438 - 238465 + G 71 -14.8 -3.15861 | GACCCGGATGGCGCT CGCGGCCGCGCT CGGC ATCGCGGCCGTG TTCGTGGGGCTCCTC mntB 237755 - 238624 + | putative Mn2+/Zn2+ ABC-type transporter,permease component CMM_0176 238675 - 239907 + | hypothetical protein mntC 239904 - 240830 + | putative Mn2+/Zn2+ ABC-type transporter,substrate binding protein CMM_0178 240866 - 242077 + | hypothetical protein CMM_0179 242217 - 243596 + | NAD-dependent aldehyde dehydrogenase CMM_0180 243680 - 244027 + | hypothetical protein CMM_0181 245394 - 244054 - | putative glycosyltransferase CMM_0182 245749 - 245483 - | hypothetical protein CMM_0183 245857 - 247074 + | hypothetical protein TERM 92 247511 - 247547 + G 84 -15.8 -3.78934 | gap 1 CGACCGCGAGCTCGC CGTGCAGGCCGGCCGCG GCCT CGCGCCCG-CCGGCACG TTCTTCTCCGCGGCG metE1 247071 - 248258 + | hypothetical protein metC 248261 - 249622 + | O-acetylhomoserine (thiol)-lyase CMM_0186 249625 - 250932 + | putative oxidoreductase/monooxygenase CMM_0187 251618 - 250962 - | TetR family transcriptional regulator TERM 93 251634 - 251661 + H 70 -12.7 -3.29649 | GTCGTCCTCCGCCTC CCGCGGATCCG ACCTGC CGGATCCGCCG TTCGTGTCATAGACT CMM_0188 251762 - 253300 + | putative multi-drug efflux MFS permease CMM_0189 253394 - 254248 + | putative hydrolase CMM_0190 254241 - 254825 + | TetR family transcriptional regulator CMM_0191 254831 - 255229 + | hypothetical protein CMM_0192 255621 - 255226 - | hypothetical protein CMM_0193 256381 - 255632 - | TetR family transcriptional regulator CMM_0194 256493 - 257581 + | putative oxidoreductase CMM_0195 257578 - 258390 + | hypothetical protein CMM_0196 258445 - 259767 + | putative sugar ABC transporter, binding protein CMM_0197 259819 - 260805 + | putative sugar ABC transporter, permease component CMM_0198 260802 - 261683 + | putative sugar ABC transporter, permease component TERM 94 261745 - 261704 - T 88 -21.5 -2.62184 | opp_overlap 261706 261742, overlap 261706 CCTCGCCCCAGACGA GAGCCCGCCCTCGTGGTCC ATGT GGATCGCGGGGGCGGGCTC TCGTCGTGCGTGCGC TERM 95 261706 - 261743 + T 95 -24.9 -2.83164 | opp_overlap 261704 261706, overlap 261742 TCGCCCCAGACGAGA GCCCGCCCTCGTGGTCC ATGT GGATCGCGGGGGCGGGC TCTCGTCGTGCGTGC TERM 96 261743 - 261706 - T 80 -18.3 -2.85351 | opp_overlap 261706 261742, overlap 261704 TCGCCCCAGACGAGA GCCCGCCCTCGTGGTCC ATGT GGATCGCGGGGGCGGGC TCTCGTCGTGCGTGC CMM_0199 262104 - 261760 - | hypothetical protein CMM_0200 262565 - 262107 - | hypothetical protein CMM_0201 264466 - 262610 - | glycoside hydrolase family protein CMM_0202 265752 - 264565 - | putative dehydrogenase/oxidoreductase CMM_0203 268430 - 265809 - | RND superfamily drug exporter CMM_0204 268492 - 269082 + | TetR family transcriptional regulator CMM_0205 270904 - 269099 - | hypothetical protein CMM_0206 271876 - 271019 - | 3-hydroxybutyryl-CoA dehydrogenase CMM_0207 272632 - 272021 - | hypothetical protein CMM_0208 272795 - 273652 + | putative membrane-associated phospholipid phosphatase CMM_0209 273681 - 273920 + | hypothetical protein CMM_0210 273960 - 274382 + | hypothetical protein CMM_0211 275459 - 274410 - | putative monooxygenase CMM_0212 275694 - 275539 - | hypothetical protein CMM_0213 275764 - 276108 + | hypothetical protein CMM_0214 276335 - 276105 - | hypothetical protein CMM_0215 276907 - 276332 - | TetR family transcriptional regulator CMM_0216 277004 - 278119 + | putative Zn-dependant oxidoreductase CMM_0217 278919 - 278116 - | hypothetical protein CMM_0218 279569 - 278916 - | hypothetical protein CMM_0219 279717 - 280016 + | hypothetical protein CMM_0220 280058 - 280642 + | hypothetical protein CMM_0221 280982 - 280668 - | putative multidrug resistance membrane protein CMM_0222 281377 - 280982 - | putative multidrug resistance membrane protein CMM_0223 282169 - 281510 - | putative phosphatase CMM_0224 282255 - 283451 + | putative glycosyl transferase CMM_0225 283730 - 284890 + | putative sarcosine oxidase CMM_0226 285598 - 284921 - | hypothetical protein CMM_0227 286691 - 285732 - | putative acetyl xylan esterase CMM_0228 287369 - 286773 - | TetR family transcriptional regulator CMM_0229 289510 - 287456 - | putative acyl esterase CMM_0230 291240 - 289507 - | putative peptide ABC transporter, ATP-binding protein CMM_0231 292118 - 291237 - | putative peptide ABC transporter, permease component CMM_0232 293134 - 292115 - | putative peptide ABC transporter, permease component CMM_0233 294786 - 293131 - | putative peptide ABC transporter, substrate-binding protein CMM_0234 295393 - 294887 - | hypothetical protein CMM_0235 296382 - 295483 - | hypothetical protein CMM_0236 298468 - 296480 - | hypothetical protein CMM_0237 299049 - 298681 - | hypothetical protein CMM_0238 300355 - 299132 - | putative bicyclomycin efflux MFS permease CMM_0239 300554 - 300775 + | hypothetical protein CMM_0240 300958 - 301788 + | putative short-chain alcohol dehydrogenase CMM_0241 302098 - 301826 - | hypothetical protein ogtA 302795 - 302169 - | 6-O-methylguanine-DNA methyltransferase sigY 303322 - 302792 - | hypothetical protein CMM_0244 303648 - 304385 + | putative two-component system response regulator CMM_0245 304664 - 305953 + | hypothetical protein CMM_0246 306397 - 310155 + | hypothetical protein TERM 97 310212 - 310245 + F 89 -22.5 -2.62616 | opp_overlap 310187 CGCATCAGGCGCGAC CGACGGTCGGATCCC CGCG GGGGTCCGGCCGTCG TCGTGTGAGGGCTGC CMM_0247 310377 - 311591 + | putative oxidoreductase/dehydrogenase CMM_0248 311642 - 312358 + | hypothetical protein CMM_0249 312537 - 313244 + | hypothetical protein CMM_0250 313241 - 314725 + | hypothetical protein CMM_0251 315788 - 314775 - | LacI family transcriptional regulator CMM_0252 316573 - 315851 - | hypothetical protein CMM_0253 317823 - 316624 - | hypothetical protein TERM 98 317150 - 317204 + g 81 -18.5 -3.01791 | opp_overlap 317148, overlap 317154 GCCGCCCAGACGAGC CGCAGC-GCGCCGCTCGCGGGGAGCTC GGC GGACGCCCCGCGCGCGGTGCAGCT-CG TGTTCGAGAGCACCT TERM 99 317154 - 317201 + g 77 -19 -2.73875 | gap 1, opp_overlap 317148, overlap 317150 CCCAGACGAGCCGCA GC-GCGCCGCTCGCGGGGAGCTC GGC GGACGCCCCGCGCGCGGTGCAGC TCGTGTTCGAGAGCA CMM_0254 318227 - 317976 - | hypothetical protein CMM_0255 318363 - 319832 + | putative MFS permease CMM_0256 320687 - 320052 - | hypothetical protein CMM_0257 321345 - 320698 - | MerR family transcriptional regulator CMM_0258 322134 - 321541 - | hypothetical protein crcB1 322313 - 322837 + | putative membrane protein involved in chromosome condensation crcB2 322834 - 323214 + | putative membrane protein involved in chromosome condensation TERM 100 323207 - 323261 + F 70 -14.4 -3.14132 | TCGCGGTGGGCGGGG CGCTGTGACGGC-CCTCG-CGCCCGTGG GTC CCGCGGACGTCGAGGCGCTG-CAC-GCG TTCCTCGCGGCGGCG TERM 101 323457 - 323507 + G 70 -13.9 -3.29144 | gap 2, overlap 323446 GGCTCGACCCTCGCC CGGCACGCGCTCGCCGAGGCGGCGG CCG CCGGCG-CTGGGCGCGCGTG-GCTG TTCTCGCGCAGGTCG CMM_0261 323211 - 323687 + | putative acetyltransferase CMM_0262 323697 - 324284 + | putative NTP pyrophosphohydrolases ddlA 325301 - 324294 - | putative D-alanine--D-alanine ligase CMM_0264 326058 - 325348 - | hypothetical protein CMM_0265 326615 - 326061 - | hypothetical protein TERM 102 327378 - 327354 - g 72 -14.3 -3.35996 | GATGGTGAGCGAGAA GTACGGGTCGG ACT CCGACCAGTAC CGCGGCGTGCTCGCC CMM_0266 326881 - 328224 + | hypothetical protein CMM_0267 328221 - 329078 + | RpiR family transcriptional regulator CMM_0268 329139 - 330083 + | putative hydroxyacid dehydrogenase CMM_0269 330080 - 331660 + | putative aldehyde dehydrogenase CMM_0270 331874 - 333112 + | putative sugar ABC transporter, substrate binding protein CMM_0271 333112 - 334101 + | putative sugar ABC transporter, permease component CMM_0272 334094 - 334969 + | putative sugar ABC transporter, permease component CMM_0273 335052 - 335822 + | trehalose utilization-related protein CMM_0274 335819 - 337048 + | putative dehydrogenase CMM_0275 337069 - 338382 + | ROK family transcriptional regulator CMM_0276 338379 - 339035 + | hypothetical protein CMM_0277 340074 - 339073 - | hypothetical protein CMM_0278 340257 - 340847 + | putative chorismate mutase TERM 103 340944 - 340907 - T 95 -19.7 -3.64703 | opp_overlap 340910, overlap 340908 CCCGGCCGACCCAAA CCCGCGCGCGTCCGCCC TTCG GGGCGGGCGCGCGCTGT CGTTCCCGCTCGCGT TERM 104 340943 - 340908 - T 93 -23.2 -2.78679 | opp_overlap 340910, overlap 340907 CCGGCCGACCCAAAC CCGCGCGCGTCCGCCC TTCG GGGCGGGCGCGCGCTG TCGTTCCCGCTCGCG TERM 105 340910 - 340941 + T 95 -26.6 -2.90723 | opp_overlap 340908 340907 GGCCGACCCAAACCC GCGCGCGTCCGCCC TTCG GGGCGGGCGCGCGC TGTCGTTCCCGCTCG CMM_0279 341297 - 340959 - | hypothetical protein CMM_0280 341847 - 341356 - | hypothetical protein CMM_0281 342899 - 342105 - | putative acetyltransferase CMM_0282 345463 - 342905 - | hypothetical protein CMM_0283 345561 - 346151 + | putative adenylate kinase CMM_0284 346705 - 346118 - | hypothetical protein CMM_0285 347499 - 346723 - | permease DMT family CMM_0286 347748 - 348374 + | TetR family transcriptional regulator CMM_0287 348371 - 348868 + | diadenosine tetraphosphate hydrolase CMM_0288 348940 - 349608 + | putative oxidoreductase TERM 106 349670 - 349612 - T 77 -16.8 -2.96692 | gap 2, opp_overlap 349665 GACGACGAGTAGACA GCGCGTGCGGAAGGGGAGGGGGAGCG ACCCGGATG CGCTCCCCCTCCCCCTCGGC-CGTG- CGGCCCTGAGGCCGT CMM_0289 350386 - 349694 - | hypothetical protein sigL 350578 - 351084 + | RNA polymerase ECF-subfamily sigma factor CMM_0291 351081 - 351872 + | hypothetical protein CMM_0292 352761 - 352171 - | hypothetical protein CMM_0293 352835 - 354202 + | putative MFS permease CMM_0294 354702 - 354199 - | hypothetical protein CMM_0295 355741 - 354731 - | LacI family transcriptional regulator TERM 107 356811 - 356787 - g 76 -11.4 -3.95324 | CATCGCCAACAAGAA GGCGGCCATG GAGCT CATGGGCGCC TGGGACCCGGGAGTC CMM_0296 355969 - 357261 + | putative sugar ABC transporter, substrate-binding protein CMM_0297 357272 - 358297 + | putative sugar ABC transporter, permease component CMM_0298 358294 - 359199 + | putative sugar ABC transporter, permease component TERM 108 360979 - 361013 + G 76 -14.8 -3.4252 | CGTCCGGCCGCCTCC CGGTGTCGCTCCCGCG CTC CGCGGGCGCGCAGCCG TTCTCGTACCTGCAC bglX 359196 - 361577 + | putative beta-glycosidase CMM_0300 362565 - 361717 - | putative nucleoside-diphosphate-sugar epimerase CMM_0301 362661 - 363410 + | TetR family transcriptional regulator CMM_0302 364307 - 363450 - | Cro/CI family transcriptional regulator CMM_0303 364409 - 365089 + | short chain oxidoreductase CMM_0304 365157 - 365555 + | hypothetical protein CMM_0305 365594 - 366160 + | hypothetical protein CMM_0306 366519 - 367412 + | hypothetical protein CMM_0307 367848 - 367435 - | putative sulfurtransferase CMM_0308 368106 - 369347 + | hypothetical protein CMM_0309 369920 - 369387 - | hypothetical protein abfA1 370093 - 371634 + | hypothetical protein TERM 109 371726 - 371767 + T 75 -15.2 -3.4072 | overlap 371699 CGCGCCGCCGGTCAG GCGCGGCGG-GAGCGCTGCC GCGC GGT-GCGCTCGTTGCCGCGC TTGTAGTCGCCCGTC CMM_0311 371940 - 371722 - | hypothetical protein CMM_0312 372867 - 372277 - | putative acetyltransferase CMM_0313 373255 - 372914 - | hypothetical protein CMM_0314 373355 - 374428 + | hypothetical protein CMM_0315 374511 - 375521 + | putative thioredoxin reductase TERM 110 375565 - 375547 - f 76 -7.5 -4.41494 | GATCCCGAAGTAAAA TTGAGTC CACAC GACTCAA GTAGAACCGAGAGAG clpY 375588 - 377780 + | ATPase with chaperone activity, ATP-binding subunit TERM 111 377785 - 377830 + T 95 -24 -2.62184 | gap 1 CCGGCGCCTGATCCC CGTGCGGCCCGCCGCGGGCCC CTCCC GGGTGCGCGGCGGGCCGT-CG TCGTGTCCGGCCGGG agaA 380030 - 377847 - | hypothetical protein CMM_0318 380141 - 380620 + | putative transcriptional regulator CMM_0319 381347 - 380682 - | hypothetical protein CMM_0320 381764 - 381414 - | hypothetical protein CMM_0321 381880 - 382884 + | putative oxidoreductase TERM 112 383087 - 383134 + G 76 -15.5 -3.43492 | gap 1 GATGCGGTGCCCGGC CTGCACACCGACCT-GCCGCGC CTCGC GCGCGGCCGGGTCGCGGCGCAG TTCTGGTCCGTGTGG CMM_0322 382892 - 384100 + | putative dipeptidase CMM_0324 386636 - 384894 - | putative ABC transporter (fused permease/ATPase) CMM_0323 384097 - 384960 + | GNAT family acetyltransferase CMM_0325 388456 - 386636 - | putative ABC transporter (fused permease/ATPase) CMM_0326 389223 - 388453 - | hypothetical protein CMM_0327 390032 - 389220 - | putative thioesterase TERM 113 389692 - 389716 + g 77 -18.5 -2.78384 | opp_overlap 389672 CGGGCGGCGGGGCGG CCGCGCGCGGC GAG GACGCGCGCGG TCTCGTAGGCGACCA CMM_0328 392058 - 390130 - | putative oxidoreductase/methylase TERM 114 391695 - 391733 + g 76 -18 -2.79183 | overlap 391698 TCGAGAGGCGGTAGC GCACGCCGGCCGTCCGGG CCG CCCGGGCGGCCGCGGTGA TCTCGTCGGGGTGGG TERM 115 391698 - 391730 + g 77 -18.3 -2.66435 | overlap 391695 AGAGGCGGTAGCGCA CGCCGGCCGTCCGGG CCG CCCGGGCGGCCGCGG TGATCTCGTCGGGGT CMM_0329 393200 - 392055 - | putative dehydrogenase, iron-regulated protein TERM 116 392622 - 392568 - G 79 -14.1 -3.61398 | CCGGCCCGCGAAGAA CGGC-GCCGTCGCGTCCTCCTCCGCGC GCA GCGCGC-GCTCGACGCGTCGGCCGCCG GTCCACGCGGCGAGC TERM 117 392872 - 392825 - G 70 -17.1 -2.62184 | gap 3 CGCCCGTCGACACGA CCGCGCGGCGGCCGTCGCGCACGG CGT CCGCG-GCGA-GACCGC-GCGCGA CGAGGCCCGCGCGCA npsB 398776 - 393197 - | non-ribosomal peptide synthetase TERM 118 394165 - 394120 - G 70 -16.2 -2.62983 | gap 3 CGGATCCGGACAGCA GGCTGACGGCGGGCGTCGCGGGA GCG TCCCG-GTCGCCCGC-GCC-GCC CTGGCCGGCCTGGCG npsA 405660 - 398773 - | non-ribosomal peptide synthetase CMM_0332 405761 - 407479 + | hypothetical protein CMM_0333 407472 - 408191 + | 4-phosphopantetheinyl transferase CMM_0334 408202 - 409668 + | putative organic acid synthase CMM_0335 411495 - 409681 - | hypothetical protein CMM_0336 411898 - 411488 - | hypothetical protein CMM_0337 413278 - 411935 - | hypothetical protein TERM 119 413421 - 413372 - R 100 -30.8 -3.27022 | gap 1, opp_overlap 413418 TCCATCCGACAGGAA CGGGGCCGCCCGGGCG-TCCCCC AGGAG GGGGAATCGTCCGGGCGGCCCCG TGGGTCGCGTCGTAC CMM_0338 414691 - 413447 - | hypothetical protein CMM_0339 415358 - 414897 - | hypothetical protein TERM 120 415435 - 415395 - R 95 -25.5 -2.62263 | overlap 415421 AGGGGTGGCAGACGA CCGCCCCGGCGCGGATC GCGAGAG GATCCGTGCCGGGGCGG CCACGGGATGGATCA CMM_0340 416053 - 415448 - | hypothetical protein CMM_0341 416628 - 416050 - | hypothetical protein CMM_0342 416999 - 416625 - | hypothetical protein CMM_0343 417618 - 417181 - | putative alkaline shock protein TERM 121 417660 - 417698 + r 72 -16.1 -2.71144 | GTGGTGGTGCTGCTG CGTGGCGCGGATC-CGAGG GTG CCTCGCGATCC-CGCCTCG TCATTCAGACGCATG CMM_0344 419000 - 417819 - | AraC family transcriptional regulator TERM 122 419106 - 419162 + r 86 -20.1 -2.71144 | gap 2, overlap 419085 CCTCGTCCGGCCGCC GGGCCGGACGGGCCGGGTCGGGGCGCC TTCGT GGCGCCCCGACCCA-CCCG-CTGCCGC TAGTTCGCGGCGCTG CMM_0345 420103 - 419162 - | hypothetical protein CMM_0346 420871 - 420329 - | hypothetical protein manX 424278 - 421093 - | putative alpha-mannosidase bglY 425685 - 424342 - | putative 6-phospho-beta-glucosidase CMM_0349 426407 - 425682 - | DeoR family transcriptional regulator CMM_0350 426635 - 427657 + | putative carbohydrate kinase CMM_0351 427733 - 429019 + | putative sugar ABC transporter, substrate binding protein CMM_0352 429016 - 430014 + | putative sugar ABC transporter, permease component CMM_0353 430011 - 430934 + | putative sugar ABC transporter, permease component nagB 430931 - 431695 + | putative glucosamine-6-phosphate isomerase bgaA 431769 - 434759 + | beta-galactosidase CMM_0356 435344 - 434829 - | putative acyl-CoA thioesterase CMM_0357 435599 - 436171 + | hypothetical protein CMM_0358 436334 - 437383 + | LacI family transcriptional regulator CMM_0359 437577 - 438791 + | putative sugar ABC transporter, substrate-binding protein CMM_0360 438788 - 439747 + | putative sugar ABC transporter, permease component CMM_0361 439744 - 440574 + | putative sugar ABC transporter, permease component CMM_0362 440654 - 442702 + | putative alpha glucosidase CMM_0363 442816 - 443871 + | putative Fe3+-hydroxamate ABC transporter,substrate binding protein CMM_0364 443868 - 444944 + | putative Fe3+-siderophore ABC transporter,permease component CMM_0365 444941 - 445711 + | putative Fe3+-siderophore ABC transporter,ATPase component CMM_0366 445786 - 446586 + | putative nucleoside-diphosphate-sugar epimerase phnD 446742 - 447713 + | putative phosphonate ABC transporter, substrate-binding protein phnC 447735 - 448634 + | putative phosphate/phosphonate ABC transporter,ATPase component phnE 448631 - 450379 + | putative phosphate/phosphonate ABC transporter,permease component panE 450376 - 451269 + | 2-dehydropantoate 2-reductase phnX 451903 - 451286 - | putative acetyltransferase phnN 452610 - 451900 - | hypothetical protein phnM 453788 - 452607 - | putative metal-dependent hydrolase involved in phosphonate metabolism phnV 454531 - 453785 - | hypothetical protein phnL 455286 - 454528 - | putative phosphonate ABC transporter, ATPase TERM 123 454798 - 454744 - G 71 -15.5 -3.14344 | overlap 454786 CAGCTCCGGCAGGAA CCCGCGCGCGACGTTCACGCGCTGC TGCTC GCCGCCCGAGAAGGTCGCGGGCGGC AGCGACCACAGCCGC phnK 456062 - 455283 - | phosphonates transport ATP-binding protein phnJ 456928 - 456059 - | putative C-P (carbon-phosphorus) lyase phnI 458040 - 456925 - | hypothetical protein phnH 458687 - 458040 - | putative C-P (carbon-phosphorus) lyase component phnG 459175 - 458684 - | putative C-P (carbon-phosphorus lyase component phnF 459383 - 460120 + | GntR family transcriptional regulator CMM_0382 460220 - 461437 + | putative multidrug efflux MFS permease TERM 124 462310 - 462336 + G 79 -13.6 -3.63515 | overlap 462311 CTGGGCGACGAGGCG GGCGTGCGCGAC GCG GTCGCGCCCGCG TTCTTCCGGCTCGGC TERM 125 462311 - 462335 + G 70 -17.1 -2.77895 | overlap 462310 TGGGCGACGAGGCGG GCGTGCGCGAC GCG GTCGCGCCCGC GTTCTTCCGGCTCGG ppcA 461542 - 464274 + | hypothetical protein CMM_0384 464998 - 464495 - | Cro/CI family transcriptional regulator ltaE 466255 - 465146 - | putative L-threonine aldolase CMM_0386 466948 - 466292 - | putative NTP pyrophosphohydrolase CMM_0387 468287 - 467019 - | putative NAD(FAD)-dependent dehydrogenase CMM_0388 468608 - 469054 + | putative alkaline shock protein aqpZ 469277 - 470095 + | hypothetical protein TERM 126 470673 - 470627 - g 84 -20.9 -2.72991 | overlap 470652 CGAGAGGGCGAAGGA CGCCGGATCCGACGCGCTCGA GAAGG CCGAGGACGCCGGATCCGACG CGCTCGAGAAGACCA CMM_0390 470190 - 471176 + | hypothetical protein CMM_0391 471784 - 471212 - | hypothetical protein CMM_0392 472327 - 471875 - | hypothetical protein CMM_0393 473138 - 472374 - | hypothetical protein CMM_0394 474225 - 473188 - | hypothetical protein CMM_0395 474789 - 474322 - | hypothetical protein CMM_0396 475919 - 474786 - | putative Na+ efflux ABC transporter, permease component CMM_0397 476797 - 475916 - | putative ABC transporter, ATP-binding protein CMM_0398 476999 - 477448 + | hypothetical protein CMM_0399 478344 - 477439 - | hypothetical protein CMM_0400 479135 - 478341 - | putative short chain dehydrogenase CMM_0401 479188 - 479970 + | putative short-chain alcohol dehydrogenase CMM_0402 480438 - 479989 - | hypothetical protein glpT 480919 - 482340 + | putative glycerol-3-phosphate MFS permease CMM_0404 483100 - 482363 - | putative two-component system response regulator CMM_0405 484506 - 483097 - | putative two-component system, sensor kinase TERM 127 484630 - 484654 + H 70 -15 -2.87132 | gap 1 CCGGTGCCAGACTGG CGGCACGGGCG CATC CGCCCG-GCCG TCTCTCCCGCACCGC CMM_0406 484813 - 486405 + | putative drug efflux MFS permease TERM 128 486427 - 486468 + T 82 -15.1 -3.66999 | overlap 486428 CCGCTCCTGCCGCTC CACCTCTCGCCGATCCGGA TCCG TCCGGGTCGGCGAGAGCCA TTTCCGTGGGTGCGT TERM 129 486428 - 486467 + T 79 -18.6 -2.79878 | overlap 486427 CGCTCCTGCCGCTCC ACCTCTCGCCGATCCGGA TCCG TCCGGGTCGGCGAGAGCC ATTTCCGTGGGTGCG CMM_0407 487339 - 486491 - | alpha/beta fold family hydrolase CMM_0408 487427 - 488134 + | hypothetical protein CMM_0409 488861 - 488148 - | putative oxidoreductase CMM_0410 488994 - 489413 + | MerR family transcriptional regulator CMM_0411 489604 - 490074 + | hypothetical protein CMM_0412 490088 - 490267 + | hypothetical protein TERM 130 490284 - 490313 + T 79 -13.5 -3.65224 | opp_overlap 490286 CGACCCGTCGCACGA GAGGGACCCCGCC TGAC GACGAGGTCCCTC TTCTTCGCATGGCGT CMM_0413 490736 - 490374 - | hypothetical protein CMM_0414 490826 - 491362 + | MarR family transcriptional regulator osmC 491439 - 491861 + | organic hydroperoxide resistance protein CMM_0416 491861 - 492268 + | hypothetical protein TERM 131 492285 - 492325 + F 93 -21.2 -3.01712 | gap 1 CCGCCGCGCGCACGA C-GACGGCCACCGGATCCC GTAG GGGGACCGGTGGCCGTCCG TCTTGACGGGGGCGG CMM_0417 492406 - 492837 + | hypothetical protein CMM_0418 493980 - 492847 - | putative epoxide hydrolase CMM_0419 495226 - 493997 - | hypothetical protein CMM_0420 496368 - 495310 - | putative sugar ABC transporter, membrane spanning protein TERM 132 495414 - 495358 - G 70 -13.7 -3.23216 | gap 1, overlap 495361 495363 CTGCAGCAGCACGAA GACCAGCAGGATCCCGCCCGTGATGA TGGTGG TCGCCTCGGGCGGGATGCCGCCG-TC GCGCGTGATGAGCAC CMM_0421 497447 - 496365 - | putative sugar ABC transporter, permease component CMM_0422 499018 - 497444 - | putative sugar ABC transporter, ATPase component CMM_0423 500116 - 499112 - | putative sugar ABC transporter, binding protein CMM_0424 501956 - 500283 - | putative sugar uptake ABC transporter, ATPase component CMM_0425 503104 - 502082 - | LacI family transcription regulator CMM_0426 503366 - 504322 + | manganese-containing catalase TERM 133 504576 - 504553 - f 74 -8 -4.27617 | opp_overlap 504556 CAGATGCGAGCAAAA GCCTCGCCGA CGAG TGGGCGCGGC CCGGCGGTGATTTCA TERM 134 505094 - 505104 + F 77 -4 -4.62471 | opp_overlap 505094 CGCAGTTATTCAATA TGAT CAC ATCA TTTTTGCGGATTCGC CMM_0427 506213 - 506389 + | hypothetical protein CMM_0428 506602 - 509040 + | putative phosphoketolase CMM_0429 509840 - 509091 - | hypothetical protein CMM_0430 511758 - 509932 - | hypothetical protein TERM 135 510756 - 510724 - G 79 -14.1 -3.63515 | GCCGACGGTGAAGAA GGCGTGCAGCCGG TACTCGC CCGGGCGCACGCC CGAGAAGGCGAACGC CMM_0431 514192 - 511928 - | putative hemagglutinin/hemolysin-related protein CMM_0432 514407 - 515069 + | hypothetical protein fepG 516114 - 515083 - | putative iron-siderophore ABC transporter,permease component fepD 517118 - 516111 - | putative iron-siderophore ABC transporter,permease component fepB 517149 - 518225 + | putative iron-siderophore ABC transporter,binding protein CMM_0436 518756 - 518235 - | putative acetyltransferase CMM_0437 518809 - 519558 + | putative SAM-dependant methyltransferase CMM_0438 520414 - 519626 - | putative hydrolase padA 520944 - 520414 - | putative phenolic acid decarboxylase CMM_0440 521008 - 521508 + | hypothetical protein CMM_0441 521634 - 522209 + | hypothetical protein CMM_0442 522274 - 522888 + | hypothetical protein TERM 136 522910 - 522962 + T 95 -24.8 -2.62616 | ACTGCGCCCCGGACG CGACGACGCGCCGCCGGTCGGGGA GCGCA TCCCCGTCCGACGGCGCGTCGTGA TCCTCTGAGCCGTCC CMM_0443 523577 - 522987 - | MarR family transcriptional regulator CMM_0444 525331 - 523574 - | MFS family transporter CMM_0445 525500 - 525856 + | hypothetical protein CMM_0446 527021 - 525870 - | putative peptidase CMM_0447 527329 - 527021 - | hypothetical protein CMM_0448 527865 - 527347 - | hypothetical protein CMM_0449 528774 - 527872 - | hypothetical protein CMM_0450 529494 - 528865 - | hypothetical protein CMM_0451 530912 - 529491 - | hypothetical protein CMM_0452 531616 - 531050 - | putative acetyltransferase pitA 531745 - 532962 + | low affinity phosphate permease CMM_0454 532974 - 533285 + | hypothetical protein CMM_0455 533288 - 533998 + | hypothetical protein CMM_0456 534233 - 534030 - | hypothetical protein CMM_0457 534450 - 535112 + | TetR family transcriptional regulator CMM_0458 535109 - 536812 + | MFS-type efflux permease CMM_0459 536932 - 537375 + | hypothetical protein CMM_0460 539066 - 537372 - | hypothetical protein CMM_0461 539259 - 540188 + | permease AEC family CMM_0462 540359 - 540201 - | hypothetical protein CMM_0463 540974 - 540498 - | putative acetyltransferase CMM_0464 542021 - 541062 - | hypothetical protein CMM_0465 543241 - 542537 - | hypothetical protein CMM_0466 544162 - 543275 - | hypothetical protein CMM_0467 544609 - 544172 - | hypothetical protein CMM_0468 544995 - 544648 - | hypothetical protein CMM_0469 545154 - 546062 + | putative oxidoreductase CMM_0470 546659 - 546093 - | hypothetical protein CMM_0471 546768 - 548468 + | putative two-component sensor histidine kinase CMM_0472 548510 - 549385 + | hypothetical protein TERM 137 549493 - 549459 - T 70 -13.6 -3.14132 | GGCCGGTCGGAGGAA TGGAGCGGGATCCC ACCCGAG GGGACCCCGATCCA CGGCGCAGCTGCCGC CMM_0473 550475 - 549618 - | putative two-component system response regulator CMM_0474 551192 - 550605 - | hypothetical protein xthB 552117 - 551281 - | putative exonuclease III TERM 138 552119 - 552173 + r 74 -16.9 -2.52193 | overlap 552118 552133 552136 GTGGCGACGCGCATG CGTCCACGGTACCGGGAGCGGGCGG GGCAG CCGGCCGCGCGCGGTCCCGCGGAGG GTTGCTCGGTCTGCT TERM 139 552986 - 553008 + r 73 -9.8 -3.98224 | opp_overlap 552972 AGCGCAAATCTGCTG GTACTCGCGC GAT GCGCCAGTGC TTCTATTTTGACTAT TERM 140 554471 - 554503 + r 77 -7 -4.58466 | gap 1, overlap 554499 GTGGATTCAAGTGCT TCCCGC-CATGACGC CCTT GCGTCATCCGCGCGA TTTTCTCGTTCTGCA CMM_0476 556488 - 556093 - | hypothetical protein CMM_0477 557234 - 556485 - | hypothetical protein sigZ 557785 - 557231 - | putative ECF sigma factor CMM_0479 557918 - 558391 + | hypothetical protein TERM 141 558710 - 558662 - g 70 -13.8 -3.30124 | CCGCAGCGCCGAGAA GGCCGCGCCCCTCGCCGAC-GCCG GCG CGACCGTCG-CGGAGAGCGCCGCC GACGCGGTGCGCGAC TERM 142 559208 - 559238 + G 77 -19.1 -2.72344 | gap 1 CGCGCACCTCAAGGG CGGCGCGATGCTCG CCGG CGAGC-TCGCGCCG TCCTTCGCGCTCGAC CMM_0480 558564 - 559439 + | putative beta-hydroxyacid dehydrogenase pyrE 559506 - 560060 + | orotate phosphoribosyltransferase CMM_0482 560060 - 562135 + | hypothetical protein CMM_0483 562242 - 563510 + | putative MFS permease nagD 564308 - 563511 - | putative N-acetylglucosamine-6-phosphate deacetylase cpdA 564438 - 565343 + | putative 3',5'-cyclic-nucleotide phosphodiesterase TERM 143 565397 - 565363 - T 100 -31.6 -2.62263 | opp_overlap 565368, overlap 565368 ACGGCCCGGACATGA GGAGAGGCGGCGACCC GTG GGGTCGCCGCCTCTCC TGGCGCTGCTGGTCT TERM 144 565392 - 565368 - T 93 -22.9 -2.84634 | opp_overlap 565368, overlap 565363 CCGGACATGAGGAGA GGCGGCGACCC GTG GGGTCGCCGCC TCTCCTGGCGCTGCT TERM 145 565368 - 565392 + T 93 -22.9 -2.79302 | opp_overlap 565368 565363 CCGGACATGAGGAGA GGCGGCGACCC GTG GGGTCGCCGCC TCTCCTGGCGCTGCT CMM_0486 565587 - 565417 - | hypothetical protein CMM_0487 565772 - 566191 + | hypothetical protein recQ2 566280 - 568454 + | putative ATP-dependent DNA helicase CMM_0489 569520 - 568474 - | putative adenine-specific DNA-modification methylase TERM 146 569799 - 569759 - H 82 -18.1 -3.14132 | CCGGCCGCCGAGGAA CCGGCCGCCGCGGGCCCGG CCG CCGAGCGCCCGGCCGCCGA GGGACCGGCCGCCGA CMM_0490 569873 - 570955 + | hypothetical protein CMM_0491 571114 - 572013 + | hypothetical protein CMM_0492 572091 - 573335 + | hypothetical protein CMM_0493 574463 - 573369 - | putative oxidoreductase TERM 147 574488 - 574537 + H 75 -17.1 -2.59431 | gap 1, overlap 574487 CGTACGCGCGGGGTC GCGCGGGCCTCCGGGCTGGCGG CGTCCGC CCGCCATCTCGGGCGCCCG-GC TGGGTTCTCGCAGCA CMM_0494 574662 - 576896 + | putative sucrose synthase (sucrose-UDP glucosyltransferase) CMM_0495 576893 - 578218 + | putative glycosyltransferase TERM 148 578562 - 578546 - f 74 -7.2 -4.20516 | GCGCCAGGTAACAAA CCGGAC ACACG GCCCGG CTACGCTCCCGGCAT CMM_0496 578576 - 580291 + | hypothetical protein CMM_0497 580291 - 581226 + | hypothetical protein CMM_0498 581223 - 582068 + | hypothetical protein CMM_0499 582124 - 583041 + | putative lysophospholipase CMM_0500 583038 - 583532 + | putative acetyltransferase CMM_0501 586429 - 583604 - | hypothetical protein CMM_0502 588303 - 586426 - | serine protease CMM_0503 588673 - 589404 + | TetR family transcriptional regulator CMM_0504 591650 - 589476 - | putative phospholipase C alkB 592566 - 591934 - | DNA repair system specific for alkylated DNA CMM_0506 593311 - 592631 - | hypothetical protein lplA 593390 - 594439 + | putative lipoate-protein ligase A CMM_0508 594982 - 594698 - | putative acetyltransferase CMM_0509 595268 - 595050 - | hypothetical protein CMM_0510 595616 - 595269 - | hypothetical protein CMM_0511 595865 - 596761 + | hypothetical protein CMM_0512 597207 - 596758 - | hypothetical protein pgmA 598960 - 597320 - | phosphoglucomutase TERM 149 598462 - 598511 + g 70 -13.5 -3.35996 | gap 1, overlap 598466 TGGCGTCGGAGTCGG CCGGGCCGCCGTGCGGCGGGTT GTACTTG AAGCCGCCGT-CGGCGGGCGGG TTGTGGCTGGGGGTC pheA 599010 - 599966 + | hypothetical protein serS 600028 - 601308 + | seryl-tRNA synthetase CMM_0516 601305 - 602126 + | HAD family hydrolase CMM_0517 602512 - 603657 + | LytR family transcriptional regulator TERM 150 603685 - 603725 + F 71 -15.3 -3.01041 | overlap 603687 GCATCAGGTGAGGGC GACGGGGCCCCGCCGCACA CCC TATGCAGCGAGGACCCGTC TATCTCGTTCAGCTT CMM_0518 604230 - 604763 + | hypothetical protein TERM 151 605828 - 605875 + G 74 -17.6 -2.78463 | gap 1 GGCTCGACCTCGCGA CGGCGCTCGTGGTCCGCGCGAGC ACG GC-CGCGCCGGCGACGGGCGCGG TGTCGTCACCCGAGT CMM_0519 604825 - 605892 + | hypothetical protein TERM 152 606112 - 606136 + G 73 -15.7 -3.21194 | opp_overlap 606129, overlap 606101 AGGCTGGGACGGCCA CATGCCCGTGG AGA CCACGGGCCTG TTCATCCCGTTTCTC CMM_0520 606062 - 606760 + | hypothetical protein CMM_0521 606778 - 607854 + | putative oxidoreductase/dehydrogenase CMM_0522 607946 - 608311 + | hypothetical protein CMM_0523 609706 - 608351 - | glycosy hydrolase family protein TERM 153 610056 - 610015 - R 90 -21.7 -2.87132 | gap 1, overlap 610018 610019 TCTCTGGTTGAGACA GAATGC-CGAACGGCCCGCC ACT GGCGGGCCGTTCGCGTATCC GGGGCAGGGAGCGGA TERM 154 610053 - 610018 - R 95 -19.8 -3.58726 | gap 1, overlap 610015 610019 CTGGTTGAGACAGAA TGC-CGAACGGCCCGCC ACT GGCGGGCCGTTCGCGTA TCCGGGGCAGGGAGC TERM 155 610050 - 610019 - R 90 -22.4 -2.75022 | gap 1, overlap 610018 610015 TGGTTGAGACAGAAT GCCGAACGGCCCGCC ACT GGCGGGCCGTTCG-C GTATCCGGGGCAGGG CMM_0524 611445 - 610366 - | hypothetical protein CMM_0525 611858 - 611442 - | PadR family transcriptional regulator CMM_0526 612006 - 612341 + | hypothetical protein CMM_0527 612444 - 613211 + | hypothetical protein CMM_0528 613276 - 614184 + | putative metal-dependent hydrolase CMM_0529 614297 - 614839 + | hypothetical protein CMM_0530 614857 - 615891 + | putative oxidoreductase plsC 615988 - 616755 + | putative 1-acylglycerol-3-phosphate O-acyltransferase TERM 156 616827 - 616795 - T 100 -29.3 -2.70932 | opp_overlap 616784, overlap 616797 CCGCCGGGGGAATGA GATCGGCCCGGGCCT TCG AGGCCCGGGCCGATC TGCGCACGTGAACGT TERM 157 616825 - 616797 - T 95 -26.1 -2.90075 | opp_overlap 616784, overlap 616795 GCCGGGGGAATGAGA TCGGCCCGGGCCT TCG AGGCCCGGGCCGA TCTGCGCACGTGAAC panD 617491 - 617075 - | hypothetical protein TERM 158 618760 - 618708 - g 74 -11.8 -3.8211 | overlap 618709 CGTCAGCGACAAGAA GGCCGC-CGCGGAGCGCGAGGACGTG AAG CGCGGCCGCGGGATCCGCGAGCG-CC ACGAGCGCGCCGAGC CMM_0533 617722 - 618813 + | putative tRNA processing ribonuclease BN phrB 620382 - 618856 - | deoxyribodipyrimidine photo-lyase CMM_0535 620529 - 621914 + | putative glycosyl transferase CMM_0536 622354 - 621911 - | MarR family transcriptional regulator TERM 159 622468 - 622501 + r 81 -19.6 -2.52464 | opp_overlap 622466 GGTGCCGACATGACT GAGGGCCGACCCCA GAGGCA TGGGGCCGGCCCTC TCCCTTGCACCAGGA CMM_0537 623469 - 622675 - | putative transcriptional regulator upp 624504 - 623866 - | uracil phosphoribosyltransferase CMM_0539 624573 - 625022 + | putative cytosine/adenosine deaminase CMM_0540 625583 - 625050 - | hypothetical protein CMM_0541 625636 - 626043 + | putative carboxymuconolactone decarboxylase-like protein CMM_0542 626040 - 626948 + | putative phosphotriesterase-family protein CMM_0543 627862 - 626945 - | CDF family metal efflux transport protein proC 627994 - 628869 + | hypothetical protein trkA 629578 - 628910 - | potassium uptake system NAD-binding protein trkG 631067 - 629643 - | Trk family potassium uptake protein CMM_0547 631147 - 631695 + | ArsR family transcriptional regulator CMM_0548 631818 - 632057 + | putative DNA-binding protein, putative excisionase TERM 160 632266 - 632299 + TF 100 -23.9 -3.18264 | CAGCACGTGATGGAT GAGGACGCCGACCCG GTGA CGGGGCGGCGTCCTC TTCGTCGGTAGAGGG serB1 633196 - 632357 - | putative phosphoserine phosphatase CMM_0550 633187 - 633450 + | putative thioredoxin CMM_0551 633485 - 633787 + | hypothetical protein TERM 161 633859 - 633803 - f 71 -16.3 -2.63596 | CGTCAGCGGAGACGA CCGCGCGTCCCGCGGAGCCGCGGCG GTGCCCG CGCCCCGGCGGCGCGTGACGCTCGC GCAGGTGGCGGAGCG CMM_0552 633849 - 634880 + | LacI family transcription regulator CMM_0553 634993 - 636306 + | putative sugar MFS-permease CMM_0554 636303 - 637142 + | putative hydrolase CMM_0555 637139 - 638380 + | hypothetical protein CMM_0556 639012 - 638377 - | hypothetical protein CMM_0557 639307 - 639092 - | hypothetical protein CMM_0558 639718 - 639386 - | hypothetical protein CMM_0559 640306 - 639896 - | hypothetical protein CMM_0560 641534 - 640299 - | putative transcriptional regulator aspS 643020 - 641710 - | aspartyl-tRNA synthetase CMM_0562 643133 - 643966 + | hypothetical protein CMM_0563 643963 - 644583 + | putative allophanate hydrolase subunit CMM_0564 644580 - 645497 + | putative allophanate hydrolase subunit CMM_0565 646376 - 645549 - | hypothetical protein CMM_0566 648985 - 646496 - | putative excinuclease ABC subunit A TERM 162 649320 - 649341 + r 75 -17.3 -2.62184 | overlap 649340 TCGCTCCTCCTTCTC CGCGGCTCG TCGT CGAGCCGCG TGCTGTCGCCGGGAC sigB 650580 - 649537 - | putative RNA polymerase sigma 70 factor CMM_0568 650896 - 651540 + | putative phosphoglycerate mutase ccbD 651540 - 652148 + | putative thioredoxin ccdA 652149 - 652889 + | cytochrome C biogenesis membrane protein resB 652873 - 654519 + | putative cytochrome C biogenesis membrane protein resC 654516 - 655541 + | putative cytochrome C-type biogenesis protein menC 656554 - 655571 - | O-succinylbenzoate synthase TERM 163 655876 - 655913 + g 71 -15.5 -3.14132 | gap 1 CCGCCTCCCGCGTGA TGCGCAG-CGCGCGGTGG ATC CCGCCGAGCGGCTGCGCC TTGATCACGAGCAGG TERM 164 656862 - 656902 + G 72 -17 -2.8751 | gap 2, overlap 656859 656864 TTCGGGCTTGACCAC GACGAGCTACCGCGCGACGC CGC GC-TCGCGTGG-GGCTCGTC TCCTTGTACTGATCT CMM_0574 656631 - 657806 + | putative cytosine-specific DNA methylase TERM 165 658248 - 658238 - g 76 -5.4 -4.5442 | overlap 658240 TTCTTAATGAGAAAA TACC ACC GGTA TCCCCACGAGTGGAC CMM_0575 657850 - 658593 + | hypothetical protein menB 658675 - 659586 + | naphthoate synthase menE 659612 - 660799 + | O-succinylbenzoate--CoA ligase CMM_0578 661828 - 660845 - | putative quinone reductase CMM_0579 662256 - 661825 - | MarR family transcriptional regulator CMM_0580 662376 - 662798 + | hypothetical protein TERM 166 662868 - 662844 - T 86 -19.3 -3.21099 | CGCGGGCATGACGAA GGGCCGGATGC TCG GCACCCGGCCC CTCGCCTCTCAGGAG CMM_0581 663076 - 662903 - | hypothetical protein CMM_0582 663209 - 663526 + | hypothetical protein CMM_0583 663911 - 663516 - | putative NTP pyrophosphohydrolase CMM_0584 664676 - 664071 - | putative acetyltransferase CMM_0585 665268 - 664690 - | putative acetyltransferase hemA 666644 - 665325 - | glutamyl-tRNA reductase hemE 666749 - 667876 + | uroporphyrinogen decarboxylase hemY 667869 - 669308 + | hypothetical protein CMM_0589 669436 - 669777 + | hypothetical protein TERM 167 670157 - 670139 - g 74 -11.7 -3.71848 | overlap 670136 CCGGTGGATCAAGAA GGGCGTC CCGCC GACGCCC GAGGAGACGGTGGAC CMM_0590 669810 - 670226 + | hypothetical protein CMM_0591 670216 - 670491 + | hypothetical protein CMM_0592 670513 - 672150 + | hypothetical protein CMM_0593 672238 - 672801 + | hypothetical protein CMM_0594 672863 - 673642 + | hypothetical protein hemH 673642 - 674892 + | ferrochelatase hemC 674889 - 675875 + | porphobilinogen deaminase hemD 675872 - 676711 + | hypothetical protein hemB 676708 - 677688 + | delta-aminolevulinic acid dehydratase hemL 677771 - 679138 + | glutamate-1-semialdehyde 2,1-aminomutase CMM_0600 680018 - 679197 - | DNA/RNA endonuclease hemO 680764 - 680102 - | Heme oxygenase (decyclizing) TERM 168 680585 - 680555 - G 78 -18.2 -3.14132 | GCGGGGGCTGATGAA GCGCGCGGCGACGG GAT CCGCCGCCATGCGC TCGGTCGCCTGCTCG CMM_0602 681232 - 680840 - | hypothetical protein CMM_0603 682342 - 681317 - | putative Zinc-dependant oxidoreductase pfkA 683400 - 682375 - | hypothetical protein CMM_0605 683439 - 684146 + | putative kinase CMM_0606 684657 - 684157 - | putative general stress protein CMM_0607 684723 - 685688 + | putative DNA repair protein CMM_0608 686546 - 685740 - | hypothetical protein CMM_0609 686616 - 687569 + | putative aldose-1-epimerase CMM_0610 687668 - 688135 + | putative glyoxylase family protein CMM_0611 688242 - 688700 + | MarR family transcriptional regulator CMM_0612 689468 - 688722 - | hypothetical protein sacC 691201 - 689561 - | putative levanase/invertase sacB 691469 - 693034 + | putative levansucrase TERM 169 693040 - 693098 + F 71 -16.1 -2.63715 | gap 4 GCCGCAGTAGGGCGA --GGCACGGCGAGG-CGCGGCGGCGGCGG TCATC CCGTCGTCGCCGCGTCCTC-CCGGGCCGC TCATCTACACTCGCT CMM_0615 693118 - 693771 + | hypothetical protein CMM_0616 693943 - 694707 + | hypothetical protein CMM_0617 694704 - 695531 + | hypothetical protein CMM_0618 696508 - 695606 - | LysR family transcriptional regulator putA 696681 - 700331 + | delta-1-pyrroline-5-carboxylate dehydrogenase /proline oxidase CMM_0620 700353 - 700484 + | hypothetical protein CMM_0621 700481 - 701185 + | hypothetical protein CMM_0622 701209 - 701787 + | putative 4'-phosphopantetheinyl transferase CMM_0623 703105 - 701792 - | metalloendopeptidase family M1 npsC 707304 - 703102 - | non-ribosomal peptide synthase CMM_0625 707744 - 707376 - | hypothetical protein CMM_0626 707868 - 708239 + | hypothetical protein TERM 170 709799 - 709789 - g 70 -2.4 -4.42788 | CTGAACTTGAGAAAA CCCC TGA GGGT GGATGGGCAGTCGAG TERM 171 710459 - 710444 - g 71 -7.6 -4.17762 | TACTCGTCAAAACAA CCAGAA CGTA TTCTGG CGAGCCCTCGCGAGC TERM 172 711118 - 711132 + G 70 -2.1 -4.3739 | gap 1, opp_overlap 711113, overlap 711110 AGACCCAGAAGGTGC CGGCGA CGCC TC-CCG TTTTGTCCGCCAGTC TERM 173 714389 - 714342 - g 75 -4 -4.50976 | gap 1, opp_overlap 714345, overlap 714344 714345 714347 GGTCAGATCATAAAA TATGAGGACGTATG-GGGAACCG TTA CCGTTCCCTCCTACGACCCCTTG ACTAATAGACTGCAA CMM_0627 709446 - 716102 + | hypothetical protein CMM_0628 717177 - 716740 - | AsnC family transcriptional regulator CMM_0629 717361 - 718203 + | hypothetical protein rocD 718242 - 719486 + | putative ornithine aminotransferase CMM_0631 719607 - 720104 + | hypothetical protein CMM_0632 720135 - 720782 + | hypothetical protein CMM_0633 721792 - 720800 - | permease DMT family CMM_0634 722258 - 721857 - | hypothetical protein CMM_0635 723230 - 722346 - | putative NDP-sugar epimerase CMM_0636 723643 - 723227 - | hypothetical protein CMM_0637 724875 - 723640 - | benzoate transport protein BenE family CMM_0638 725136 - 726395 + | M23 family membrane bound metalloendopeptidase CMM_0639 726453 - 727175 + | hypothetical protein CMM_0640 727339 - 727794 + | hypothetical protein CMM_0641 727797 - 728033 + | hypothetical protein TERM 174 728100 - 728049 - f 100 -27.5 -3.14132 | opp_overlap 728051 CGCCGGCGTCACCAA CACGAC-CGGGAGGGCCCGGCATCC GCGA GGGTGCCGGGC-CTCCCGCGTCGTG GTTCCCCCACCTGCT TERM 175 728051 - 728098 + F 95 -26.5 -2.71144 | opp_overlap 728049 CCGGCGTCACCAACA CGAC-CGGGAGGGCCCGGCATCC GCGA GGGTGCCGGG-CCTCCCGCGTCG TGGTTCCCCCACCTG CMM_0642 728165 - 728962 + | hypothetical protein CMM_0643 729154 - 730227 + | putative oxidoreductase CMM_0644 731011 - 730274 - | putative two-component system, response regulator CMM_0645 732228 - 731008 - | putative two-component system sensor kinase CMM_0646 732650 - 732294 - | hypothetical protein CMM_0647 733354 - 732755 - | TetR family transcriptional regulator CMM_0648 733415 - 734998 + | putative efflux MFS permease CMM_0649 735725 - 736021 + | hypothetical protein TERM 176 736078 - 736031 - T 100 -30.8 -2.72661 | gap 1 GACTAGGGCGAAGGA CGACGCCCCTCCCGCACCGAC TCTCATG GTCGG-GCGGGAGGGGCGTCG TCGTGCGCGGGCCGG CMM_0650 737114 - 736095 - | putative monooxygenase CMM_0651 738264 - 737194 - | putative monooxygenase qorA 739274 - 738309 - | putative Zn-dependant quinone oxidoreductase cysK 739395 - 740333 + | hypothetical protein cysE 740336 - 740920 + | putative serine O-acetyltransferase CMM_0655 740920 - 741579 + | putative RNA methyltransferase CMM_0656 741611 - 742171 + | hypothetical protein CMM_0657 742569 - 742168 - | hypothetical protein CMM_0658 742620 - 743141 + | putative endoribonuclease L-PSP addB 744161 - 743160 - | putative adenosine deaminase CMM_0660 744239 - 744547 + | hypothetical protein CMM_0661 745338 - 748628 + | hypothetical protein TERM 177 748731 - 748767 + T 77 -17.4 -2.97747 | gap 1, opp_overlap 748734 748735, overlap 748733 748734 TGGTGTCGGAATCAA GAA-CGCCCCGCGGATC CGAT GATCCGCGGGGCCCTTC TCTGTGATGTCGCCG TERM 178 748733 - 748764 + T 87 -15.8 -3.6336 | opp_overlap 748734 748735, overlap 748731 748734 GTGTCGGAATCAAGA ACGCCCCGCGGATC CGAT GATCCGCGGGGCCC TTCTCTGTGATGTCG TERM 179 748734 - 748763 + T 84 -19.3 -2.77534 | opp_overlap 748734 748735, overlap 748733 748731 TGTCGGAATCAAGAA CGCCCCGCGGATC CGAT GATCCGCGGGGCC CTTCTCTGTGATGTC TERM 180 748763 - 748734 - T 100 -19.3 -3.81146 | opp_overlap 748733 748731 748734, overlap 748735 TGTCGGAATCAAGAA CGCCCCGCGGATC CGAT GATCCGCGGGGCC CTTCTCTGTGATGTC TERM 181 748762 - 748735 - T 90 -22.8 -2.88366 | opp_overlap 748734 748733 748731, overlap 748734 GTCGGAATCAAGAAC GCCCCGCGGATC CGAT GATCCGCGGGGC CCTTCTCTGTGATGT adhA 749830 - 748784 - | NADP-dependent alcohol dehydrogenase CMM_0663 749984 - 751369 + | putative carboxylesterase, type B SoxR 751908 - 751420 - | hypothetical protein fdxA 752015 - 752341 + | hypothetical protein CMM_0666 752338 - 752832 + | putative flavin-dependant reductase CMM_0667 754794 - 752869 - | putative secreted phosphoesterase TERM 182 755134 - 755099 - H 84 -19 -2.71011 | gap 1 AGGCGCCCGCAAGGA GCAGCGCGACGTCCGGC CGG GCCGGACG-CTCGCCGC GCCGGGCGGATCCGA CMM_0668 755391 - 756011 + | putative phosphohydrolase CMM_0669 756008 - 756292 + | hypothetical protein CMM_0670 756963 - 756289 - | hypothetical protein CMM_0671 759155 - 757050 - | hypothetical protein CMM_0672 759820 - 759152 - | hypothetical protein TERM 183 759514 - 759563 + g 74 -17.1 -3.14344 | gap 1 GGTGCCCGGCGAGCG CGAGCTCCTCGGCGACGACCGCGC GGA GCGTGA-CGTCGTCGGCGGGCTCG TTGATCCGCGGGGTG CMM_0673 760500 - 759817 - | TetR family transcriptional regulator CMM_0674 761907 - 760594 - | AraC family transcriptional regulator CMM_0675 762248 - 762451 + | hypothetical protein sbcC 765496 - 762473 - | putative exonuclease sbcD 766662 - 765496 - | putative dsDNA exonuclease subunit pknC 766983 - 769637 + | putative serine/threonine-protein kinase CMM_0679 769707 - 770345 + | hypothetical protein CMM_0680 770342 - 773032 + | putative acyl-CoA ligase/aldehyde dehydrogenase TERM 184 773887 - 773852 - g 82 -19.6 -2.66435 | overlap 773849 ACGCCCACCACATGA CCGCGCCGGAGCCCAC GGGC GCGGGCGCCGTCGCGG CGATGCGCGCGGCCC fabB 773029 - 774276 + | 3-oxoacyl-[acyl-carrier-protein] synthase ilvG 774273 - 775922 + | putative acetolactate synthase coaBC 775919 - 776554 + | putative pantothenate metabolism flavoprotein CMM_0684 776547 - 777245 + | peptide ABC transporter ATP-binding protein CMM_0685 777242 - 778471 + | peptide ABC transporter permease CMM_0686 778696 - 779385 + | hypothetical protein CMM_0687 780259 - 779420 - | short chain dehydrogenase TERM 185 779603 - 779625 + g 71 -12.6 -3.53276 | overlap 779598 GATCGCGTCGCGCGT CGCCGTCGGG TCG CCCGGCGTCG TGTTCTTGTATCCCT CMM_0688 780416 - 780892 + | hypothetical protein purA 780975 - 782264 + | adenylosuccinate synthetase CMM_0690 782357 - 782485 + | hypothetical protein CMM_0691 782950 - 782498 - | MarR family transcriptional regulator CMM_0692 783012 - 783380 + | hypothetical protein CMM_0693 783456 - 784205 + | hypothetical protein CMM_0694 784745 - 784209 - | hypothetical protein CMM_0695 784899 - 785327 + | hypothetical protein CMM_0696 786303 - 785365 - | putative hydrolase CMM_0697 786603 - 786349 - | Cro/CI family transcriptional regulator CMM_0698 787300 - 786623 - | hypothetical protein CMM_0699 788857 - 787367 - | two component system, sensor kinase TERM 186 787426 - 787403 - G 77 -16 -3.21416 | gap 1, overlap 787404 CAGCGTCAGCAGGAA GCGCGCGCCGG CGC CCGGCGC-CGC GGGCAAGCAGACGAG CMM_0700 789522 - 788854 - | putative two-component system response regulator CMM_0701 789670 - 790368 + | hypothetical protein CMM_0702 790440 - 791081 + | putative acetyltransferase CMM_0703 791481 - 791116 - | hypothetical protein CMM_0704 792331 - 791849 - | hypothetical protein TERM 187 792565 - 792516 - H 79 -18.4 -2.78596 | gap 1 GACGGGCTCACCATA CGGCGTCCGGGCGCGGGGCGCGC GGGCA GCGC-CCCCGTCCCCGCGCGCCG CCCCGCCCGGCCGCG CMM_0705 792796 - 793188 + | hypothetical protein pbpB 793298 - 795367 + | putative beta lactamase/penicillin-binding protein CMM_0707 795421 - 796800 + | putative two-component system, sensor kinase CMM_0708 796797 - 797477 + | putative two-component system response regulator CMM_0709 797660 - 798079 + | stress-induced protein, putative organic hydroperoxide resistance protein tyrA 798162 - 798545 + | hypothetical protein CMM_0711 799560 - 798577 - | hypothetical protein CMM_0712 800480 - 799650 - | hypothetical protein CMM_0713 801126 - 800539 - | hypothetical protein CMM_0714 803158 - 801284 - | hypothetical protein wzy2 804867 - 803155 - | membrane protein, putative polysaccharide polymerase wcnG 805895 - 804846 - | putative pyruvyl-transferase wzx2 807082 - 805892 - | hypothetical protein wcnE 808125 - 807079 - | putative mannosyltransferase wcnD 809255 - 808125 - | putative glycosyltransferase wcnC 810730 - 809255 - | putative undecaprenyl-phosphate sugar phosphotransferase wzb 811540 - 810821 - | hypothetical protein TERM 188 811036 - 811061 + g 70 -12.6 -3.4072 | CCCGCAGCTGCTCCG GCACGTCGCC GTCGCA GGCGATGTGC TTCTCGTCCCCGGTC wzc 812962 - 811550 - | putative protein tyrosine kinase wcnB 813177 - 815450 + | putative acyltransferase wcnA 816677 - 815640 - | putative membrane-bound acyltransferase CMM_0725 817479 - 816769 - | putative esterase CMM_0726 818729 - 817680 - | hypothetical protein CMM_0727 819783 - 818980 - | putative hydrolase purL 822140 - 819780 - | phosphoribosylformylglycinamidine synthase II purQ 822832 - 822137 - | phosphoribosylformylglycinamidine synthase subunit I purS 823224 - 822832 - | putative phosphoribosylformylglycinamidine (FGAM) synthase CMM_0731 824028 - 823345 - | hypothetical protein CMM_0732 824193 - 825590 + | putative MFS permease CMM_0733 826337 - 825663 - | GntR family transcriptional regulator CMM_0734 826366 - 827205 + | putative amidohydrolase TERM 189 827261 - 827228 - T 95 -25.3 -2.62616 | opp_overlap 827228 CCACCGCTGACACGA CGCGGGCCCGGCCGC CGAG GCGACCGGGCCCGCA TCTCATGCGACGGGA TERM 190 827228 - 827261 + T 90 -20.9 -2.78384 | opp_overlap 827228 CCACCGCTGACACGA CGCGGGCCCGGCCGC CGAG GCGACCGGGCCCGCA TCTCATGCGACGGGA CMM_0735 828266 - 827277 - | putative oxidoreductase furA 828392 - 828877 + | FUR family transcriptional regulator katA 828956 - 830485 + | hypothetical protein TERM 191 830517 - 830551 + T 100 -29.4 -2.62184 | opp_overlap 830517 GCTGATCGCACGACA CGACGCCCGTCCCCTC GGT GAGGGGGCGGGCGTCG TCGTGTGCGGCGCGG TERM 192 830551 - 830517 - T 100 -27.2 -2.79796 | opp_overlap 830517 GCTGATCGCACGACA CGACGCCCGTCCCCTC GGT GAGGGGGCGGGCGTCG TCGTGTGCGGCGCGG CMM_0738 832954 - 830624 - | hypothetical protein TERM 193 832141 - 832129 - G 75 -3.3 -4.56597 | opp_overlap 832133, overlap 832131 CGGCTGTGTTAAAAA CGTTG CTT CCACG AAGAAAGCTTTTAAT TERM 194 833051 - 833063 + r 76 -3.3 -4.7497 | opp_overlap 833039 CAACCGCCCGTTTGG TGCGG AGG CCTCA TTTTTACTCACTGCA CMM_0739 833921 - 833418 - | putative acetyltransferase CMM_0740 834535 - 833936 - | putative acyltransferase CMM_0741 834599 - 835756 + | hypothetical protein CMM_0742 835753 - 836553 + | putative integral membrane protein CMM_0743 836550 - 837290 + | hypothetical protein CMM_0744 838630 - 837317 - | hypothetical protein TERM 195 838948 - 838978 + G 74 -11.9 -3.75024 | gap 1, overlap 838969 GTGGAACTGGTTCCT CGTCTCGATCGTGC TCGG GC-CGATCGCGACG TTCTTCATCGTGACG CMM_0745 838844 - 839251 + | hypothetical protein prkA 839833 - 839279 - | putative phosphoribulokinase CMM_0747 840855 - 839902 - | putative dioxygenase CMM_0748 842203 - 840974 - | putative monooxygenase CMM_0749 842313 - 842807 + | MarR family transcriptional regulator CMM_0750 843623 - 842826 - | putative glycosyl transferase CMM_0751 846349 - 843620 - | acyl-CoA dehydrogenase/methyltransferase CMM_0752 846449 - 846667 + | hypothetical protein purC 847675 - 846755 - | phosphoribosylaminoimidazolesuccinocarboxyamide synthase purD 848922 - 847672 - | phosphoribosylamine--glycine ligase CMM_0755 849311 - 849691 + | hypothetical protein CMM_0756 849751 - 850059 + | hypothetical protein purF 851586 - 850126 - | amidophosphoribosyltransferase purM 851676 - 852785 + | phosphoribosylaminoimidazole synthetase TERM 196 852890 - 852866 - T 76 -17.2 -2.80074 | overlap 852863 852861 852868 GGGCGCACAAGAGGA GACCCGCCTC ACGAG GAGGCGGGTC CGATGCCCATCCGGC CMM_0759 853131 - 852922 - | hypothetical protein CMM_0760 853341 - 854471 + | putative FAD-dependant oxidoreductase CMM_0761 856861 - 854801 - | amino acid permease APC family TERM 197 856921 - 856876 - R 70 -14.5 -2.90723 | gap 1 CGAGCGGCAACGATA CCCCGCGACGCGCCC-GGGCCG CGA CGGCGCTGGGCGCGGCCCGTGA CCCCGCTGGATCCCC CMM_0762 857615 - 856950 - | hypothetical protein CMM_0763 857678 - 859141 + | transcriptional regulator ppaF 859301 - 860284 + | hypothetical protein TERM 198 862440 - 862406 - g 72 -14.3 -3.41051 | opp_overlap 862413 GGACTCCGAGCAGAA CACGGACGAGGACGC GACGA GCATCCTCGTGCGCG ACCGCTCGTTCACCG CMM_0765 860397 - 862478 + | putative glycogen debranching enzyme CMM_0766 862605 - 863672 + | hypothetical protein CMM_0767 864067 - 863669 - | hypothetical protein CMM_0768 864483 - 864085 - | hypothetical protein TERM 199 864559 - 864544 - H 87 -11.8 -4.18197 | opp_overlap 864544 864543 ATGCGCTACTGAAAA CCCCGC GCGA GCGGGG ATTTCCCGACGCCGG CMM_0769 864672 - 867941 + | RND family mulitdrug efflux protein TERM 200 868065 - 868082 + F 73 -9.9 -3.92373 | ACCGCTACCGGACCA TCCATCC GGGC GGATGGA TTTGTCAGTCAGGTG CMM_0770 869280 - 870491 + | putative ATP-dependent RNA helicase CMM_0771 870534 - 871118 + | putative acetyltransferase CMM_0772 871152 - 871655 + | putative acetyltransferase CMM_0773 871708 - 872181 + | hypothetical protein CMM_0774 872320 - 873297 + | putative sugar kinase CMM_0775 873294 - 874235 + | putative aldolase TERM 201 875345 - 875386 + G 70 -13.5 -3.35679 | GGCGCGCGCGTCGTC GTCGACGGCCGCGGCATCG AGGT CGACGGCGAGGCCGACGGC TTCTGGCTCGGCCCC CMM_0776 874289 - 875794 + | putative NAD-dependent aldehyde dehydrogenase CMM_0777 875854 - 876780 + | hypothetical protein CMM_0778 876777 - 878693 + | putative acetolactate synthase CMM_0779 879132 - 878806 - | hypothetical protein CMM_0780 879560 - 880537 + | putative sugar phosphate isomerase/epimerase CMM_0781 880534 - 881502 + | putative 3-hydroxyacyl-CoA dehydrogenase CMM_0782 882285 - 881536 - | putative oxidoreductase CMM_0783 882419 - 883261 + | Cro/CI family transcriptional regulator CMM_0784 883362 - 884003 + | hypothetical protein CMM_0785 884700 - 884011 - | GntR family transcriptional regulator tpiB 885546 - 884749 - | putative triosephosphate isomerase rpiB 886012 - 885551 - | putative ribose 5-phosphate isomerase dakA 887798 - 886062 - | putative dihydroxyacetone kinase CMM_0789 888640 - 887879 - | GntR family transcriptional regulator CMM_0790 889623 - 888694 - | putative sugar ABC transporter ATP-binding protein CMM_0791 890663 - 889620 - | putative sugar ABC transporter, permease component CMM_0792 891745 - 890768 - | putative sugar ABC transporter, solute-binding protein TERM 202 891792 - 891823 + r 82 -13 -4.06419 | gap 1 GGGGGTCCTGGACGT CGTC-GTCGGGGCGA TCT TCGTCCCGCCCGACG TTGTTTGTCAACACA CMM_0793 893008 - 892001 - | putative myo-inositol dehydrogenase CMM_0794 893985 - 893068 - | putative sugar epimerase CMM_0795 894292 - 896427 + | putative extracellular nuclease/phosphatase trxC 896513 - 896914 + | putative thioredoxin recQ3 897027 - 898910 + | putative ATP-dependent DNA helicase CMM_0798 899312 - 901318 + | hypothetical protein bldKB 901468 - 903150 + | putative oligopeptide ABC transporter, substrate-binding lipoprotein bldKA 903154 - 904116 + | putative oligopeptide ABC transporter, permease component bldKC 904113 - 905105 + | putative peptide ABC transporter, permease component bldKD 905102 - 905968 + | putative peptide ABC transporter, ATP-binding protein bldKE 905965 - 906903 + | putative peptide ABC transporter, ATP-binding protein TERM 203 908160 - 908120 - g 72 -16.7 -2.87274 | overlap 908117 GTGGATAACGAACGA GCACGAGCACGACGGCCTC GGA GCGCCCGGCGTGCTCGGGC GGCTGATGGACACGA pipA 906900 - 908207 + | putative prolyl aminopeptidase pepP1 908204 - 909688 + | putative Xaa-Pro aminopeptidase CMM_0806 909706 - 910419 + | GntR family transcriptional regulator CMM_0807 910532 - 911776 + | putative secreted D-amino acid oxidase CMM_0808 911773 - 912111 + | hypothetical protein CMM_0809 912108 - 913799 + | putative amino acid oxidase dapX 913796 - 914713 + | dihydrodipicolinate synthase CMM_0811 914721 - 915722 + | putative proline racemase CMM_0812 915749 - 917269 + | putative aldehyde dehydrogenase TERM 204 917362 - 917372 + F 70 -2.4 -4.57569 | GGAGGGCGTTGGAGG CCCG GCA CGTG TTTTTCGGCAGGTGG CMM_0813 917535 - 919640 + | putative acyl-CoA oxidase CMM_0814 920055 - 919711 - | putative growth inhibitor CMM_0815 920303 - 920052 - | CopG family transcriptional regulator CMM_0816 921158 - 920376 - | putative esterase, lysophospholipase pipB 921336 - 922304 + | proline iminopeptidase tagD 922820 - 922323 - | glycerol-3-phosphate cytidylyltransferase TERM 205 923133 - 923149 + H 80 -9.4 -4.26344 | opp_overlap 923132 923133, overlap 923140 TTACATTCAACCAAC CCCACC CGTCT GGTGGG TTTTCATCAGCCTGT wcoA 923198 - 925816 + | putative cell surface protein TERM 206 925834 - 925867 + F 90 -22.5 -2.78384 | opp_overlap 925834 CGCGCGCGCACGACA GGATGGGCCGATCCC CTCG GGGGTCGGCCCGTCC TGTCGTGCGCGCGCC TERM 207 925867 - 925834 - f 84 -18.9 -2.78384 | gap 1, opp_overlap 925834 CGCGCGCGCACGACA GGATGGGCCGATCCCC TCG GGGG-TCGGCCCGTCC TGTCGTGCGCGCGCC wcoB 926113 - 928713 + | putative secreted protein wcoC 929197 - 930732 + | putative undecaprenyl-phosphate sugar phosphotransferase wcoD 930734 - 931966 + | putative glycosyltransferase wcoE 931963 - 932790 + | putative phosphatidylglycerophosphate synthase wcoF 932787 - 934028 + | putative glycosyltransferase TERM 208 934118 - 934138 + G 70 -16.9 -2.62616 | GTCGCCTGGCCGCGA TGACCGCGG CCG CCGCGGTCA TCCTGTCCGCGGTCG TERM 209 934341 - 934320 - g 72 -13.7 -3.33261 | gap 1 CGGCAAGTTCCAGAA CGC-GCGCCC CGC GGGCGCCGCG GCCGGCACGAACCTC TERM 210 935874 - 935856 - g 70 -13.8 -3.28712 | CCTCCGGGTCGACAA CGCCGCGC GCG GCGCAGCG GGCCCCATCGACGGA TERM 211 939318 - 939288 - g 75 -13.2 -3.61398 | overlap 939291 GGCGTCGGCGAAGAA GGACGGCACCGTCA CGG TGACGGCGCCGGTC GTCGCGCCGCCCGCC TERM 212 939315 - 939291 - g 77 -17.9 -2.93073 | overlap 939288 GTCGGCGAAGAAGGA CGGCACCGTCA CGG TGACGGCGCCG GTCGTCGCGCCGCCC wcoG 934078 - 939963 + | putative cell surface protein TERM 213 940919 - 940970 + G 74 -16.4 -3.16881 | gap 1 GATCTCGCTCCGCGT GCGCGCGACCGTCACCGCGGGCGTC GTC GTCGTC-GCGGCCGCGGTCGCGCCC TTCGTCCAGTCCGTG wcoH 940128 - 941498 + | hypothetical protein TERM 214 942861 - 942837 - g 79 -18.5 -2.79183 | CGGAGGCGGAGCAGA CGGGCCGCGCG GCG CGCGCGGCGCG GAAGGCGCACGCCGC wcoI 941495 - 942883 + | capsular polysaccharide synthesis enzyme CMM_0828 943579 - 944319 + | hypothetical protein wcoK 947329 - 946682 - | hypothetical protein CMM_0830 949463 - 947529 - | putative glycosyltransferase wcoM 949624 - 950673 + | putative glycosyl transferase wzx3 950845 - 952464 + | putative membrane protein involved in the export of polysaccharides wcoN 952628 - 953671 + | putative nucleotide sugar epimerase wcoO 954522 - 953701 - | hypothetical protein wcoP 954603 - 955109 + | MarR family transcriptional regulator wcoQ 955106 - 955870 + | hypothetical protein wcoR 957742 - 955907 - | glycoside hydrolase family protein CMM_0838 957982 - 958515 + | hypothetical protein TERM 215 958574 - 958542 - f 73 -14.2 -3.32993 | gap 2, opp_overlap 958566 GCAGGGAGAGAGGAA CGCCGGCCCTGCCGTC TGG GACGG--GGACCGGCG GATGGTGCCTGGACG TERM 216 958712 - 958693 - f 75 -13.6 -3.51365 | opp_overlap 958693 CCACATCGGACAGAA GCCCTCTC GTGA GAGAGGGC TCATATCCGTGGCGA CMM_0839 959321 - 960616 + | putative membrane bound metalloprotease CMM_0840 960630 - 962003 + | NPL/P60 family secreted protein TERM 217 962063 - 962103 + T 88 -21.3 -2.62184 | gap 2 CCGGCCCGGACGCGA CGACGCCCGCCTCACCGCA TCTGC TGCGG-G-GGCGGGCGTCG TCGTGTCGGCCGCGC ipyA 962667 - 962140 - | hypothetical protein CMM_0842 962722 - 963747 + | putative cell cycle protein hptA 963749 - 964300 + | hypothetical protein TERM 218 965538 - 965480 - g 82 -20.2 -2.71364 | overlap 965482 GCAGGGCCGCAAGCA GATCCTCGAGGTGCACGGGCGCGGCAAG CCG CTCGCCGCGGGCGTCGACCTCGAGGTCC TCGCGCGGAAGACGC TERM 219 965536 - 965482 - g 79 -19.2 -2.90194 | overlap 965480 AGGGCCGCAAGCAGA TCCTCGAGGTGCACGGGCGCGGCAAG CCG CTCGCCGCGGGCGTCGACCTCGAGGT CCTCGCGCGGAAGAC ftsH 964458 - 966458 + | cell division protein, membrane-bound ATP-dependent protease folE 966463 - 967047 + | hypothetical protein folP 967044 - 967916 + | dihydropteroate synthase CMM_0847 967921 - 968631 + | hypothetical protein folBK 968625 - 969515 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydroneopterin aldolase CMM_0849 969512 - 969994 + | hypothetical protein CMM_0850 970044 - 970532 + | hypothetical protein CMM_0851 970529 - 972331 + | hypothetical protein CMM_0852 972328 - 973089 + | hypothetical protein panC 973132 - 974010 + | pantoate--beta-alanine ligase lysS 974122 - 975663 + | lysyl-tRNA synthetase CMM_0855 975670 - 975795 + | hypothetical protein CMM_0856 975817 - 975999 + | hypothetical protein TERM 220 976862 - 976820 - g 73 -16.2 -3.01712 | CCGGCGTCGGCAAGA CCGCCGTCGTCGAGGGCCTG GCG CAGGCCATCGTCAAGGGCGA CGTCCCGGAGACGCT clpC 976162 - 978672 + | ATP-dependent protease, ATPase subunit galE2 978839 - 979726 + | putative UDP-glucose 4-epimerase CMM_0859 979723 - 980700 + | putative oxidoreductase TERM 221 980897 - 980921 + F 85 -14.3 -4.04318 | opp_overlap 980856, overlap 980880 TCTGCGCGACACTCC CGCTCCGGC CTCCTGT GCCGGAGCG TTTCTCATGTGTGCA rplJ 981002 - 981517 + | 50S ribosomal protein L10 rplL 981593 - 981976 + | 50S ribosomal protein L7/L12 TERM 222 982037 - 981993 - T 80 -18.6 -2.87468 | overlap 981991 TCGCACCACAGCACA GCG-CTCAGGGCGCCGATCCCC TCG GGGG-TCGGCGCCCTGCGTCGT CCCCGGGGCAGGGCG CMM_0862 983674 - 982055 - | putative transcriptional regulator TERM 223 982646 - 982683 + g 79 -19.2 -2.79183 | gap 1 GGAGTGCTGGGCCGT CGGCCGCAGCGTGCGGA GCAGG TCC-CACGCCGCGGCCG TCTGATCCAGGTGCG CMM_0863 983800 - 984279 + | MarR family transcriptional regulator CMM_0864 984361 - 985593 + | putative multidrug efflux MFS permease TERM 224 985614 - 985662 + T 90 -21.6 -2.83715 | gap 1 GACCGGCCGATCCGG TCGCCCCCGATCCCGCCCGC-CC TCAC GGCGCAGGCGGGGCCGGGGGCGC TGTCGTGCTGGTGCG CMM_0865 986655 - 985636 - | LacI family transcription regulator TERM 225 986912 - 986879 - H 95 -5.9 -5.42259 | gap 1, overlap 986881 986882 986883 CTATGGGGAAAAAAA CACCGGCCAGGCGACG GCG CCTCACCC-GCCGACG CACGCATGACAGGAC TERM 226 986906 - 986881 - H 73 -6.7 -4.35085 | overlap 986879 986882 986883 ATGGGGAAAAAAACA CCGGCCAGGCG ACGG CGCCTCACCCG CCGACGCACGCATGA CMM_0866 986970 - 988334 + | putative alpha-glucoside ABC transporter,substrate-binding protein CMM_0867 988471 - 989442 + | putative alpha-glucoside ABC transporter,permease component CMM_0868 989439 - 990428 + | putative alpha-glucoside ABC transport system,permease component TERM 227 990444 - 990484 + F 85 -20.4 -2.62184 | gap 1 TCCGCACCCGTCAGA C-CCGGCCCGGTCGTCCGC TCGC GCGGGCGGCCGGGCCGTCG TCGTGTCGGGCGCAG CMM_0869 990551 - 992431 + | ABC transporter permease/ATPase CMM_0870 993255 - 992488 - | hypothetical protein CMM_0871 994001 - 993258 - | hypothetical protein cysB 994171 - 995535 + | putative cystathionine beta-synthase metB 995583 - 996755 + | cystathionine gamma-synthase rnhA 997559 - 996801 - | ribonuclease H TERM 228 997028 - 997057 + g 70 -16.3 -2.66316 | overlap 997024 GATCGGCCGCGCGCT CGGCGTCGGCCGC GACG GCGGCCGTCTCCG TCGTGTCGTCGGGGG CMM_0875 997737 - 998759 + | LacI family transcriptional regulator araB 998939 - 1000642 + | ribulokinase araD 1000639 - 1001349 + | L-ribulose-5-phosphate 4-epimerase araA 1001346 - 1002863 + | L-arabinose isomerase CMM_0879 1002940 - 1004070 + | putative sugar ABC transporter, substrate-binding protein CMM_0880 1004248 - 1005777 + | putative sugar ABC transporter, ATPase component CMM_0881 1005783 - 1006970 + | putative sugar ABC transporter, permease component TERM 229 1007301 - 1007267 - T 93 -22.9 -2.64794 | opp_overlap 1007267, overlap 1007272 GCGAAGCGGAGACGA CGAGAGCCGCCCCCG TGATC CGGGAGCGGCCCTCG TGTCGTGCGGGTGCG TERM 230 1007267 - 1007301 + T 79 -18.5 -2.79183 | opp_overlap 1007267 1007272 GCGAAGCGGAGACGA CGAGAGCCGCCCCCG TGATC CGGGAGCGGCCCTCG TGTCGTGCGGGTGCG TERM 231 1007296 - 1007272 - T 73 -16.4 -2.84634 | opp_overlap 1007267, overlap 1007267 GCGGAGACGACGAGA GCCGCCCCCG TGATC CGGGAGCGGC CCTCGTGTCGTGCGG xylA 1008512 - 1007319 - | xylose isomerase bglJ 1008717 - 1010219 + | beta-glucosidase CMM_0884 1010216 - 1010782 + | putative acetyltransferase CMM_0885 1011250 - 1010813 - | MarR family transcriptional regulator CMM_0886 1011710 - 1011375 - | hypothetical protein CMM_0887 1012795 - 1011839 - | hypothetical protein CMM_0888 1012877 - 1013932 + | hypothetical protein CMM_0889 1014064 - 1015299 + | putative MFS-type efflux transporter CMM_0890 1015340 - 1016434 + | hypothetical protein strB 1017318 - 1016431 - | putative streptomycin phosphotransferase CMM_0892 1017965 - 1017315 - | hypothetical protein CMM_0893 1021241 - 1018383 - | LuxR family transcriptional regulator CMM_0894 1022228 - 1021575 - | putative nucleoside-diphosphate-sugar epimerase ptaA 1022461 - 1024578 + | phosphate acetyltransferase ackA 1024644 - 1025834 + | hypothetical protein CMM_0897 1026122 - 1031185 + | hypothetical protein CMM_0898 1031353 - 1032204 + | hypothetical protein CMM_0899 1032201 - 1033412 + | hypothetical protein CMM_0900 1033458 - 1035938 + | DNA polymerase III subunits gamma and tau recR 1035945 - 1036544 + | recombination protein RecR lysC 1036654 - 1037919 + | aspartate kinase asdA 1037969 - 1039066 + | aspartate-semialdehyde dehydrogenase mqoA 1039154 - 1040632 + | malate:quinone oxidoreductase CMM_0905 1040702 - 1041886 + | hypothetical protein CMM_0906 1041957 - 1042655 + | putative two-component system, response regulator tdkA 1042656 - 1043330 + | thymidine kinase CMM_0908 1043686 - 1045080 + | putative tyrosine-protein kinase CMM_0909 1045419 - 1046369 + | hypothetical protein TERM 232 1047113 - 1047079 - g 71 -10.7 -3.7941 | opp_overlap 1047108 1047112 CATGTTCCAGAACAA CGCCGAGG-TGCGCTCC ACC GGCG-GCATCCCCGGCG CCCTGGCGCTCGTCC CMM_0910 1046366 - 1048186 + | hypothetical protein CMM_0911 1048274 - 1048858 + | hypothetical protein TERM 233 1048936 - 1048911 - f 93 -21.9 -3.05463 | AGCCCGGTGACGGAA GGCCCCGAGGC ATCC GCCTCGGGGCC TTCCGCCGTCTCCGG CMM_0912 1049131 - 1049721 + | hypothetical protein CMM_0913 1050288 - 1049761 - | hypothetical protein CMM_0914 1050375 - 1051388 + | putative flavin-dependent oxidoreductase/monooxygenase pbpC 1051481 - 1053715 + | putative penicillin-binding protein TERM 234 1054031 - 1054043 + G 87 -6.9 -4.77036 | CGCGTTCTTCAGCCA CGGCG TCA CGCTG TTTTTCGTGCTGAGC CMM_0916 1053861 - 1055141 + | putative acyltransferase TERM 235 1055299 - 1055335 + G 71 -12.9 -3.44527 | opp_overlap 1055283, overlap 1055329 GGACGCTGCCGTCAT CGTCGCCGTCGCCGTGG GCA TCGCGGTGATCGCGGCG TTCTCGTGCTGCGTG CMM_0917 1055138 - 1055590 + | hypothetical protein TERM 236 1055627 - 1055650 + T 86 -19.6 -3.23216 | opp_overlap 1055627 CGTACGCACGACGAA GGGCCGCTCC CGGA GGAGCGGCCC TTCGTCGTGCTGCCG TERM 237 1055650 - 1055627 - T 86 -19.6 -3.22298 | opp_overlap 1055627 CGTACGCACGACGAA GGGCCGCTCC CGGA GGAGCGGCCC TTCGTCGTGCTGCCG CMM_0918 1056779 - 1055835 - | putative phosphohydrolase pbpD 1059316 - 1056779 - | putative penicillin-binding protein CMM_0920 1059422 - 1059604 + | hypothetical protein CMM_0921 1059604 - 1060068 + | putative endoribonuclease, putative translation initiation inhibitor TERM 238 1060094 - 1060126 + T 100 -30.7 -2.78596 | CCGCGGCGGACATGG GGAGGGCCGGGTGCG CAT CGCACCCGGCCCTCC TCTCGTCCCGGCGTG acsA1 1062189 - 1060150 - | acetyl-coenzyme A synthetase TERM 239 1062402 - 1062436 + H 79 -17.1 -3.13403 | overlap 1062400 CCGATCCTTCGTCAC GTGGCGGCGCCCGTT CCCCC GATGGGCGCCGCCCC TCTTCCTCCCCAACG CMM_0923 1062551 - 1063795 + | hypothetical protein CMM_0924 1063792 - 1064817 + | hypothetical protein TERM 240 1065156 - 1065201 + G 70 -16.2 -2.62184 | gap 3 GCGGCTCCGAGGCTC GCGC-CGTCGCGTTCCGCCCGAG TCG CTCGTGCGG--CGCGGCGTGCGC TCCTCTGCGGCGCAG CMM_0925 1064943 - 1065368 + | hypothetical protein CMM_0925A 1065365 - 1065766 + | hypothetical protein CMM_0926 1065756 - 1066115 + | hypothetical protein topA 1066457 - 1069411 + | DNA topoisomerase I tmkA 1069408 - 1070043 + | hypothetical protein holB 1070040 - 1071284 + | DNA polymerase III subunit delta' CMM_0930 1071281 - 1072858 + | hypothetical protein pbpE 1073336 - 1074694 + | D-alanyl-D-alanine carboxypeptidase pncA 1074759 - 1075349 + | putative pyrazinamidase / nicotinamidase gabD 1075427 - 1076902 + | putative succinate-semialdehyde dehydrogenase CMM_0934 1076902 - 1077702 + | putative tRNA/rRNA methyltransferase CMM_0935 1077769 - 1078116 + | hypothetical protein CMM_0936 1078250 - 1078618 + | hypothetical protein CMM_0937 1080633 - 1078702 - | putative multidrug export ABC transporter, fused permease and ATP-binding protein CMM_0938 1080838 - 1081764 + | putative multidrug export ABC transporter, ATP-binding protein CMM_0939 1081761 - 1082594 + | putative multidrug export ABC transporter,permease component CMM_0940 1082591 - 1083433 + | putative multidrug export ABC transporter,permease component CMM_0941 1084745 - 1083396 - | MFS family transporter TERM 241 1085563 - 1085595 + G 89 -15.5 -4.07885 | opp_overlap 1085579 GCGTCCCACGTCTCC CGCGTCGTCGACACC ACC GGTGCGGGCGACGCG TTTTGCGGGGCGCTG CMM_0942 1084888 - 1085718 + | hypothetical protein CMM_0943 1085724 - 1086191 + | hypothetical protein CMM_0944 1086418 - 1087686 + | putative sugar ABC transporter, substrate-binding protein CMM_0945 1087690 - 1088631 + | putative sugar ABC transporter, permease component CMM_0946 1088643 - 1089554 + | putative sugar ABC transporter, permease component CMM_0947 1089587 - 1091449 + | putative beta-glycosidase CMM_0948 1091558 - 1092697 + | LacI family transcriptional regulator CMM_0949 1092917 - 1092708 - | hypothetical protein CMM_0950 1093471 - 1092917 - | hypothetical protein CMM_0951 1093591 - 1094295 + | hypothetical protein CMM_0952 1095748 - 1094342 - | putative MFS permease CMM_0953 1097269 - 1095854 - | putative MFS permease CMM_0954 1097486 - 1097782 + | hypothetical protein CMM_0955 1099572 - 1097779 - | putative peptide ABC transporter, permease compound CMM_0956 1101113 - 1099572 - | putative peptide ABC transporter, substrate-binding protein CMM_0957 1102527 - 1101103 - | putative MFS permease CMM_0958 1103351 - 1102524 - | putative peptide ABC transporter, ATP-binding protein CMM_0959 1104208 - 1103348 - | putative peptide ABC transporter, ATP-binding protein ribH 1104792 - 1104310 - | riboflavin synthase subunit beta ribAB 1106123 - 1104789 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II ribC 1106776 - 1106120 - | riboflavin synthase subunit alpha ribD 1107846 - 1106776 - | diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase CMM_0964 1108891 - 1108127 - | putative hydrolase trpS 1109901 - 1108888 - | tryptophanyl-tRNA synthetase xthA 1110829 - 1109984 - | putative exonuclease III CMM_0967 1111949 - 1110840 - | membrane protein, putative ribonuclease ptsA 1112074 - 1113729 + | phosphoenolpyruvate--protein phosphatase TERM 242 1113763 - 1113792 + T 100 -25.1 -3.21099 | opp_overlap 1113763 CCCGCGCATACGGAA GGCCCCGCAGCTC CTGG GAGCTGCGGGGCC TTGGTGGTCCGGGGG TERM 243 1113792 - 1113763 - T 100 -25.1 -3.12351 | opp_overlap 1113763 CCCGCGCATACGGAA GGCCCCGCAGCTC CTGG GAGCTGCGGGGCC TTGGTGGTCCGGGGG sdhB 1114579 - 1113818 - | succinate dehydrogenase iron-sulfur subunit sdhA 1116460 - 1114637 - | succinate dehydrogenase flavoprotein subunit sdhD 1116957 - 1116493 - | putative succinate dehydrogenase, hydrophobic membrane subunit sdhC 1117394 - 1116960 - | succinate dehydrogenase, cytochrome b subunit CMM_0973 1118728 - 1117535 - | putative mannosyl transferase manC 1118828 - 1119949 + | hypothetical protein CMM_0975 1120024 - 1121097 + | putative ABC transporter, substrate-binding protein CMM_0976 1121248 - 1122342 + | putative ABC transporter, substrate-binding protein TERM 244 1122393 - 1122350 - f 93 -21.6 -3.11687 | overlap 1122354 CGAAGTAGCATCGAA CGCACCGCGGGGGGATCGGC AGTC GCCGGTCCCCCCGCCGCGTG CTCACCACACCCACC TERM 245 1122389 - 1122354 - f 89 -21.8 -2.55544 | overlap 1122350 GTAGCATCGAACGCA CCGCGGGGGGATCGGC AGTC GCCGGTCCCCCCGCCG CGTGCTCACCACACC CMM_0977 1122424 - 1123965 + | putative sugar ABC transporter, ATPase component TERM 246 1124305 - 1124343 + G 73 -16.7 -3.02511 | gap 1 CGCTCGACACGCTCC GCGCGGGCTGGGACGCCG CCTC CGGCG-CCTACTCCGCGC TCTTCCAGGGGTCGA CMM_0978 1123962 - 1125338 + | putative sugar ABC transporter, permease component CMM_0979 1125335 - 1126639 + | putative sugar ABC transporter, permease component cddA 1126645 - 1127067 + | cytidine deaminase deoA 1127064 - 1128362 + | thymidine phosphorylase iunH 1129353 - 1128418 - | inosine-uridine preferring nucleoside hydrolase addA 1129456 - 1130574 + | adenosine deaminase CMM_0984 1130643 - 1131092 + | phosphotransferase system mannitol/fructose-specific IIA component CMM_0986 1132320 - 1131310 - | hypothetical protein CMM_0985 1131089 - 1131361 + | hypothetical protein CMM_0987 1132943 - 1132317 - | MerR family transcriptional regulator manB 1134734 - 1133031 - | putative phosphomannomutase punA 1135558 - 1134731 - | purine nucleoside phosphorylase lpdA 1135649 - 1137091 + | flavoprotein disulfide reductase accA 1138939 - 1137170 - | acetyl/propionyl CoA carboxylase subunit TERM 247 1138555 - 1138584 + g 70 -13.6 -3.21395 | gap 1, overlap 1138553 GGGCGAGCGGCGCGC CCACGCGCTCGGC CACGT GCCGGGC-CGTGG TCTTGTCGCCGAGCT CMM_0992 1139062 - 1139589 + | hypothetical protein CMM_0993 1140282 - 1139611 - | hypothetical protein CMM_0994 1140337 - 1141602 + | putative RNA methyltransferase CMM_0995 1141702 - 1142406 + | putative two component system, response regulator CMM_0996 1142396 - 1143742 + | putative two-component system, sensor kinase CMM_0997 1143739 - 1144761 + | hypothetical protein CMM_0998 1145282 - 1145049 - | hypothetical protein accD 1146892 - 1145279 - | putative acetyl/propionyl-CoA carboxylase beta chain CMM_1000 1147000 - 1147782 + | putative lipoate protein ligase CMM_1001 1147786 - 1148580 + | hypothetical protein CMM_1002 1149118 - 1148600 - | hypothetical protein purK 1149255 - 1150382 + | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 1150437 - 1150961 + | phosphoribosylaminoimidazole carboxylase catalytic subunit CMM_1005 1150958 - 1152307 + | putative transcriptional regulator wcqB 1153507 - 1152323 - | putative glycosyltransferase,mannosyltransferase wzt 1154300 - 1153554 - | putative polysaccharide ABC transporter, ATP-binding protein wzm 1155153 - 1154284 - | putative polysaccharide ABC-transporter,permease component rmlD 1156102 - 1155248 - | putative dTDP-4-dehydrorhamnose reductase rmlB 1157088 - 1156099 - | putative dTDP-glucose 4,6-dehydratase wcqC 1157269 - 1157721 + | putative sugar translocase rmlC 1157747 - 1158352 + | dTDP-4-dehydrorhamnose 3,5-epimerase rmlA 1158356 - 1159219 + | putative glucose-1-phosphate thymidylyltransferase wcqD 1160260 - 1159283 - | putative NDP-sugar-epimerase wcqE 1161288 - 1160257 - | putative glycosyl transferase wcqF 1162139 - 1161285 - | putative glycosyl transferase wcqG 1162412 - 1164625 + | hypothetical protein wcqH 1164622 - 1165584 + | putative glycosyltransferase wcqI 1165776 - 1166624 + | putative glycosyltransferase glfA 1166692 - 1167855 + | hypothetical protein wcqJ 1167855 - 1169873 + | putative glycosyltransferase TERM 248 1169906 - 1169943 + F 73 -14.2 -3.322 | gap 2, overlap 1169907 GTCCGCTGAGCGCCG AGGGCGTCCGATCCGCAC CACG GTGCGG--CGGACGCCCC TTCGTGTGTGAGAAT TERM 249 1169907 - 1169942 + F 78 -17.7 -2.58999 | gap 2, overlap 1169906 TCCGCTGAGCGCCGA GGGCGTCCGATCCGCAC CACG GTGCGG--CGGACGCCC CTTCGTGTGTGAGAA wcqK 1170018 - 1171847 + | putative secreted protein wcqL 1172007 - 1172477 + | hypothetical protein wcqM 1173797 - 1172505 - | hypothetical protein wzy4 1175393 - 1173846 - | membrane protein, putative polysaccharide polymerase gcdH 1176571 - 1175393 - | putative glutaryl-CoA dehydrogenase manA 1176737 - 1178029 + | putative mannose-6-phosphate isomerase galE1 1178064 - 1179032 + | hypothetical protein whiB1 1179182 - 1179499 + | transcriptional regulator whiB-like protein TERM 250 1180219 - 1180273 + G 74 -16.3 -3.14132 | gap 1 CGGCCACCGCGTCGT GGTCGTCCCGGCCGCGCGCGTCGCCT CCGC GGGCGACGC-CGCCCCCGGCACCGCC TTCCTGGGCAAGCGC TERM 251 1181488 - 1181536 + G 74 -16.6 -3.14564 | gap 1 CGTCCCGCTCCTCGT GGTCGCGGTGCTGGTCGCCCCGC TCGT GCTGGGCG-CCATCGCCGCGCTC TTCCTCCGCGGATCG wcqR 1179593 - 1182670 + | putative glycosyl transferase CMM_1031 1182675 - 1184174 + | putative secreted protein CMM_1032 1184704 - 1184261 - | hypothetical protein CMM_1033 1184750 - 1184965 + | hypothetical protein manB 1184968 - 1186395 + | phosphomannomutase/phosphoglucomutase TERM 252 1186414 - 1186447 + F 95 -26.1 -2.62184 | CCGTCCGCACCACCA CGACGCCGCGTCCCT CCCG AGGGGCGCGGCGTCG TCGTGTCCGCCCCGC CMM_1035 1186485 - 1186817 + | hypothetical protein copP 1186861 - 1187076 + | putative copper binding protein copA 1187078 - 1189552 + | putative metal-transporting ATPase ahcY 1189615 - 1191099 + | S-adenosyl-L-homocysteine hydrolase CMM_1039 1192009 - 1191194 - | hypothetical protein CMM_1040 1192080 - 1193075 + | hypothetical protein bglK 1195615 - 1193129 - | beta-glucosidase CMM_1042 1196949 - 1195669 - | putative MFS permease CMM_1043 1197061 - 1197702 + | TetR family transcriptional regulator CMM_1044 1199032 - 1197725 - | hypothetical protein CMM_1045 1200000 - 1199047 - | putative regulatory protein CMM_1046 1201259 - 1199997 - | hypothetical protein CMM_1047 1201942 - 1201256 - | hypothetical protein CMM_1048 1203135 - 1201939 - | hypothetical protein CMM_1049 1203247 - 1203927 + | putative two-component system response regulator CMM_1050 1203932 - 1205566 + | putative two-component system sensor kinase CMM_1051 1205550 - 1207277 + | lipoprotein LpqB CMM_1052 1207348 - 1208151 + | putative amidophosphoribosyltransferase CMM_1053 1208306 - 1208995 + | putative ribosome-associated protein secA 1209195 - 1212020 + | preprotein translocase subunit SecA TERM 253 1212062 - 1212020 - T 76 -17.6 -2.71364 | opp_overlap 1212030 CGACCGGCGCAAGTA GGTCGTACCGGGCCGACAGG TCT CCTGTCGGCCCGGGGCGATG TCGGACCGACGCACG TERM 254 1212083 - 1212110 + T 100 -24.2 -3.22298 | opp_overlap 1212083 CCGACGCACGACGAA GGGCGCGCCTCC CGCG GGAGGCGCGCCC TTCGTCGTGCGTGGG TERM 255 1212110 - 1212083 - T 100 -24.2 -3.22298 | opp_overlap 1212083 CCGACGCACGACGAA GGGCGCGCCTCC CGCG GGAGGCGCGCCC TTCGTCGTGCGTGGG CMM_1055 1212735 - 1212148 - | hypothetical protein CMM_1056 1212939 - 1213544 + | hypothetical protein CMM_1057 1213614 - 1214252 + | hypothetical protein CMM_1058 1214954 - 1215841 + | putative septum formation inhibitor-activating ATPase CMM_1059 1215851 - 1217356 + | putative two-component system sensor kinase TERM 256 1217422 - 1217397 - T 76 -17.5 -2.82516 | opp_overlap 1217397 CCCGGGACGACGAGA GCCGGGCTGCC CGTG GGCGGCCCGGC TCTCGTCGGTGGTGC TERM 257 1217397 - 1217422 + T 86 -19.7 -2.81464 | opp_overlap 1217397 CCCGGGACGACGAGA GCCGGGCTGCC CGTG GGCGGCCCGGC TCTCGTCGGTGGTGC whiB2 1217698 - 1217450 - | putative transcriptional regulator, WhiB-like CMM_1061 1217945 - 1218376 + | hypothetical protein bcp 1218886 - 1218407 - | putative alkyl hydroperoxide reductase CMM_1063 1219388 - 1219882 + | putative transcription factor CMM_1064 1220007 - 1220237 + | hypothetical protein CMM_1065 1220385 - 1221230 + | hypothetical protein CMM_1066 1221227 - 1221718 + | hypothetical protein ansP 1223261 - 1221729 - | L-asparagine permease CMM_1068 1223358 - 1223921 + | hypothetical protein CMM_1069 1225298 - 1223970 - | putative MFS permease CMM_1070 1225717 - 1225295 - | MarR family transcriptional regulator CMM_1071 1225905 - 1226081 + | hypothetical protein CMM_1072 1226186 - 1227004 + | putative hydrolase/acyltransferase CMM_1073 1228922 - 1227054 - | glycoside hydrolase family protein zwfB 1228980 - 1230362 + | glucose-6-phosphate 1-dehydrogenase CMM_1075 1231041 - 1230394 - | hypothetical protein CMM_1076 1231254 - 1232483 + | putative small-conductance mechanosensitive channel arsB 1232898 - 1234052 + | ArsB family arsenate permease CMM_1078 1234135 - 1234713 + | TetR family transcriptional regulator CMM_1079 1234760 - 1237708 + | RND superfamily drug exporter TERM 258 1237906 - 1237866 - g 70 -13.2 -3.4072 | gap 1 GATCGTGCAGCAGAA GGCGGCGGACG-GCACCGA ATCG CCCGTGCTCGCCGGCCGCC TGCTCGTCACGCAGC CMM_1080 1237705 - 1239600 + | hypothetical protein CMM_1081 1239603 - 1241030 + | hypothetical protein CMM_1082 1241407 - 1241105 - | putative monooxygenase TERM 259 1241529 - 1241490 - R 79 -17.1 -3.05384 | gap 1 CCCTCCTCCATCCAA CCGCGCGCGGCTGGACGG CAGTC CCGCCCTG-CACGCGCGG GCGTGTCGGGACGGG CMM_1083 1242457 - 1241582 - | hypothetical protein CMM_1084 1242606 - 1243430 + | putative sugar kinase otsA 1243531 - 1245126 + | putative trehalose-phosphate synthase TERM 260 1245165 - 1245189 + G 81 -18.5 -3.02144 | GACATCCAGGCCAAG GGCGGCCGCGG CTT CCCCGGCCGCC TGTTCGAGGCCCTCA otsB 1245132 - 1245959 + | putative trehalose-phosphatase TERM 261 1246548 - 1246491 - g 72 -12.1 -3.64487 | gap 4, opp_overlap 1246526, overlap 1246481 CTACACGGGCAAGAA GGCGAGC-CGCGGCGCCGCGCTG-C-AGG CGCT CCTCGTCACCACGGCGG-GCGGGCTCGCC ATGCTCGTCGGCCTC mnhAB 1246033 - 1249041 + | putative monovalent cation/H+ antiporter subunit A mnhC 1249038 - 1249598 + | putative Na+/H+ antiporter subunit mnhD 1249595 - 1251187 + | putative monovalent cation/H+ antiporter subunit D mnhE 1251184 - 1251858 + | putative monovalent cation/H+ antiporter subunit E mnhF 1251855 - 1252130 + | putative multisubunit Na+/H+ antiporter, NADH-quinone dehydrogenase mnhG 1252127 - 1252699 + | putative multisubunit Na+/H+ antiporter, NADH-quinone dehydrogenase ilvD 1252765 - 1254459 + | dihydroxy-acid dehydratase ilvB 1254456 - 1256339 + | acetolactate synthase 1 catalytic subunit ilvH 1256336 - 1256845 + | acetolactate synthase 3 regulatory subunit TERM 262 1258051 - 1258000 - g 79 -14.4 -3.61398 | gap 1 CTTCGCGTGGAACAA GGCCGACGACGACTACACGGACGGC TCG GTCGCCCGC-TAGCCGTCGCCCACC CGCACCACCGGACGC ilvC 1257014 - 1258039 + | ketol-acid reductoisomerase CMM_1097 1258173 - 1258706 + | hypothetical protein CMM_1098 1258703 - 1259071 + | hypothetical protein CMM_1099 1259482 - 1259081 - | hypothetical protein TERM 263 1259247 - 1259227 - G 74 -16.1 -3.17051 | overlap 1259225 CCGCGACCAGGAAGA CCGCCAGCG CGA CGCCGGCGG CGAGGCGCACGGGCT serA 1259548 - 1261137 + | D-3-phosphoglycerate dehydrogenase CMM_1101 1261839 - 1261216 - | TetR family transcriptional regulator CMM_1102 1261961 - 1263502 + | putative efflux MFS permease CMM_1103 1263834 - 1263580 - | hypothetical protein leuB 1263947 - 1265014 + | 3-isopropylmalate dehydrogenase ilvE 1265023 - 1266153 + | branched-chain amino acid aminotransferase CMM_1106 1266211 - 1266984 + | hypothetical protein CMM_1107 1266987 - 1267745 + | hypothetical protein gltX 1267759 - 1269279 + | glutamyl-tRNA synthetase trxB2 1269272 - 1270222 + | putative thioredoxin reductase TERM 264 1270237 - 1270265 + F 75 -13.7 -3.53811 | ACGCGTGGGGCCCGT CGGGCGCGCGCCG GTC CGGCGCCTGCCGG TTTGGCGCGGATCCG TERM 265 1271683 - 1271697 + G 71 -3.5 -4.37092 | ATCACCGGATTTGAT CGATC TCGCC GGTCG TTTTGTACCGGACAT TERM 266 1272641 - 1272651 + G 80 -8.2 -4.46233 | overlap 1272625 GGGGCGCGATCACTT GCGG ACC CCGC TTTGTTTAACATTGC CMM_1110 1270661 - 1274278 + | hypothetical protein CMM_1111 1274459 - 1274689 + | hypothetical protein TERM 267 1274816 - 1274771 - T 100 -34.1 -3.01712 | TCTGCTGCCTTAACA CGCCGACGGCCCCGCCCGAGC ATCT GCTCGAGCGGGGCCGTCGTCG CGTTCAGCGCAAGTG CMM_1112 1275844 - 1274834 - | putative K+ channel protein, beta subunit CMM_1113 1276989 - 1275979 - | putative potassium channel protein subunit CMM_1114 1277671 - 1277057 - | TetR family transcriptional regulator CMM_1115 1277727 - 1278524 + | putative short chain dehydrogenase CMM_1116 1279696 - 1278593 - | TerC family membrane protein TERM 268 1278629 - 1278686 + g 73 -15.3 -3.31144 | gap 1 ATCCGCGTCGCGGGT CGCCTC-GACGCTGCGGCCGGAGCCGCG GGC CGCGTCGTCGTCCGCGTCGGCCGGGGCG TTCTCGCCCTCGACG CMM_1117 1280352 - 1279936 - | hypothetical protein CMM_1118 1281033 - 1280395 - | putative Zn-dependant hydrolase TERM 269 1281291 - 1281320 + H 100 -20.7 -4.44667 | CCACCGCATCATCCG GCCCGGCTCCTCC TCAC GGAGGTGCCGGGC TTTCTTCTTGCCCGC CMM_1119 1281390 - 1282106 + | S51 family peptidase ungA 1282117 - 1282803 + | uracil-DNA glycosylase TERM 270 1282926 - 1282874 - gT 76 -16.1 -3.17051 | opp_overlap 1282872 1282871 1282911, overlap 1282872 1282875 1282877 GCTCGAGGAGGAATA CCAGCGGCGGCGCCGCCTGCCCG CCCACCT CCGGAAGCCCGCGCCGCCGCTGC CCGTGTTCTCCTACG TERM 271 1282925 - 1282875 - gT 81 -19.6 -2.50016 | opp_overlap 1282872 1282871 1282911, overlap 1282874 1282872 1282877 CTCGAGGAGGAATAC CAGCGGCGGCGCCGCCTGCCCG CCCACCT CCGGAAGCCCGCGCCGCCGCTG CCCGTGTTCTCCTAC TERM 272 1282923 - 1282877 - gT 72 -16.4 -2.78495 | opp_overlap 1282872 1282871 1282911, overlap 1282875 1282874 1282872 CGAGGAGGAATACCA GCGGCGGCGCCGCCTGCCCG CCCACCT CCGGAAGCCCGCGCCGCCGC TGCCCGTGTTCTCCT CMM_1122 1284360 - 1283428 - | putative membrane bound protease CMM_1121 1282857 - 1283546 + | putative acetyltransferase TERM 273 1286463 - 1286483 + Tr 74 -2.5 -4.72277 | CGGCGTAAGGAAATG CGGCG TACTGTAAAAT CGCCG TTTATTTCTCTTGTT sgaH 1287331 - 1286708 - | putative hexulose-6-phosphate synthase CMM_1124 1287992 - 1287384 - | putative 6-phospho-3-hexuloisomerase TERM 274 1288222 - 1288280 + H 72 -15.9 -2.73875 | overlap 1288227 CGCCGCCCCGCTGCA GGAGGTCGCGGAGGCGCTGTC-CGGGCTG CTG CAGCCCGTGGTCGCGCA-CCGCGCCCTCG TGATATTCACCGAGG CMM_1125 1288259 - 1289437 + | LuxR family transcriptional regulator CMM_1126 1289562 - 1291709 + | putative 5'-nucleotidase CMM_1127 1291820 - 1293247 + | putative Asp/Glu-tRNA amidotransferase CMM_1128 1293994 - 1293257 - | hypothetical protein CMM_1129 1294075 - 1295067 + | putative siderophore-interacting protein TERM 275 1295162 - 1295201 + T 70 -14.4 -3.15544 | CGCCGCGACGCAGAC CGCGCTCGCCGCGC-TGC CCCTGT GCACGCGCGGC-AGCGTG TTCGTCGAGGTGCCC CMM_1130 1296378 - 1295500 - | putative short chain alcohol dehydrogenase TERM 276 1295677 - 1295623 - G 74 -17.9 -2.71144 | GAGCTGGTCGAAGTA CGTCCCGCTCGGCGC-GCCCAGGTCGG GCA CCGACGCGAGCTGCAC-GAGCGGCACG GCGCCCGCCTCCGCG CMM_1131 1296767 - 1296375 - | hypothetical protein CMM_1132 1298197 - 1296764 - | putative pyridine nucleotide-disulphide oxidoreductase TERM 277 1297182 - 1297226 + g 74 -17.9 -2.74012 | gap 2, overlap 1297213 TCGTCGACGGTGCCG CCGGTCGCGCGC-G-CGGCGA TGACC TCGCCGGCCGCGCGCGCCTGG TACTTGCCCTGGTGG echA 1299093 - 1298254 - | enoyl-CoA hydratase CMM_1134 1300004 - 1299162 - | hypothetical protein CMM_1135 1300760 - 1300110 - | putative F420-dependent NADP reductase CMM_1136 1301598 - 1300855 - | hypothetical protein CMM_1137 1303725 - 1301683 - | hypothetical protein TERM 278 1302821 - 1302860 + g 72 -17.1 -2.81642 | overlap 1302822 GCCTCCTCGCAGAGG TCGACGATGCGCGCCGC CCAGGT GCGGCGCTCCTCGTCGG TGTCCTCGATCGTGT CMM_1138 1304239 - 1303814 - | hypothetical protein CMM_1139 1304679 - 1304368 - | hypothetical protein TERM 279 1304921 - 1304946 + H 86 -19.7 -2.80816 | GTTGGTGCGGTGAGA GGCCGGTCCCG TCTT CGGGGCCGGCC TCTCGTGCATCCGGG TERM 280 1305194 - 1305152 - H 100 -25.7 -3.01924 | gap 1, overlap 1305154 GAGGGCGCGTGAACA CACGCGGCGGG-GCCCGAGA CGGG TCTCGGGTTCCCGCCGCGTG GTGCTGGGCCCAACT TERM 281 1305192 - 1305154 - H 93 -22.5 -3.06696 | gap 1, overlap 1305152 GGGCGCGTGAACACA CGCGGCGGG-GCCCGAGA CGGG TCTCGGGTTCCCGCCGCG TGGTGCTGGGCCCAA CMM_1140 1305414 - 1306103 + | putative pyridoxamine-phosphate oxidase TERM 282 1306399 - 1306450 + G 73 -15 -3.28712 | gap 1, opp_overlap 1306356 1306354 GCTGCTCGCCCGCAC GCGCGAGGCCGACGCCGTCGTCATC ATG GGCGGCGAGGACGTCGCCC-CGCGC TTCTACGGCGGGCCC CMM_1141 1306214 - 1306984 + | putative glutamine amidotransferase CMM_1142 1307789 - 1307034 - | putative short chain alcohol dehydrogenase CMM_1143 1308553 - 1307786 - | putative short chain alcohol dehydrogenase CMM_1144 1309935 - 1308550 - | putative MFS permease CMM_1145 1310860 - 1309970 - | putative deacetylase CMM_1146 1311911 - 1310886 - | putative asparaginase CMM_1147 1312083 - 1313111 + | LacI family transcriptional regulator CMM_1148 1313187 - 1313981 + | hypothetical protein CMM_1149 1314656 - 1314009 - | hypothetical protein argS 1314856 - 1316520 + | arginyl-tRNA synthetase TERM 283 1316597 - 1316634 + F 75 -14.7 -3.28416 | gap 1, overlap 1316599 GCGACCCGCGGGAGG CCCGGCGACGCCGACGCG GTC CGCG-CGGCGGCACCGTG TTCATCTGGCTCCTC TERM 284 1316599 - 1316632 + F 76 -15.9 -3.20573 | gap 1, overlap 1316597 GACCCGCGGGAGGCC CGGCGACGCCGACGCG GTC CGCG-CGGCGGCACCG TGTTCATCTGGCTCC CMM_1151 1316632 - 1317363 + | hypothetical protein lysA 1317520 - 1319019 + | hypothetical protein thrA 1319016 - 1320347 + | homoserine dehydrogenase thrC 1320347 - 1321423 + | threonine synthase thrB 1321435 - 1322385 + | homoserine kinase TERM 285 1322916 - 1322863 - g 84 -21.5 -2.78384 | overlap 1322896 CCCCCGCCGACGAGA TGGCCCCCGAGGCCGCCGCGCCCGC CGAG ACGAGCGAGGCGGCCCCCGCGGCCG CCGAGCCCGCCGCCG TERM 286 1323864 - 1323809 - g 84 -18.3 -3.31144 | gap 3 TCGCCAGCGCCAGAA CGGC-CGCGGCCAGGGCGAC-CGCACGC AGG ACGTGCGCGCCGACCAGGCC-CGCGCCG ACCTCGGCCGCGACG CMM_1156 1322682 - 1325153 + | transcription termination factor Rho prfA 1325159 - 1326238 + | peptide chain release factor 1 CMM_1158 1326263 - 1327138 + | putative methylase of peptide chain release factors CMM_1159 1327819 - 1327166 - | hypothetical protein CMM_1160 1327903 - 1328832 + | hypothetical protein rfeA 1328829 - 1330148 + | putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase CMM_1162 1330145 - 1330615 + | hypothetical protein atpB 1330770 - 1331618 + | F0F1 ATP synthase subunit A atpE 1331665 - 1331898 + | ATP synthase C chain (Lipid-binding protein) atpF 1331910 - 1332476 + | F0F1 ATP synthase subunit B atpH 1332476 - 1333267 + | F0F1 ATP synthase subunit delta atpA 1333323 - 1334960 + | F0F1 ATP synthase subunit alpha atpG 1335010 - 1335909 + | F0F1 ATP synthase subunit gamma atpD 1335945 - 1337405 + | F0F1 ATP synthase subunit beta atpC 1337407 - 1337676 + | F0F1 ATP synthase subunit epsilon TERM 287 1337694 - 1337723 + F 80 -17.1 -3.18264 | overlap 1337685 TCACCTCCGTCCGAC GGCGGGCGGTCCT CTCG GGGGCCGTCCGCC TTCGTGCGTCCGGGC CMM_1171 1337796 - 1338551 + | hypothetical protein tag 1339157 - 1338564 - | putative DNA-3-methyladenine glycosylase I ogtB 1339618 - 1339154 - | putative methylated-DNA--protein-cysteine methyltransferase CMM_1174 1340360 - 1339881 - | AsnC family transcriptional regulator TERM 288 1340389 - 1340438 + H 73 -14.2 -3.28712 | gap 1, overlap 1340390 CAGTCCCGCGGTGGC CGGGCAACCGGATCCGCGGCGAG CGTCC CTCCCCGAGG-TCCGGATGCCCC TTCTCGGCGCCGCAC TERM 289 1340390 - 1340437 + H 78 -17.7 -2.57132 | gap 1, overlap 1340389 AGTCCCGCGGTGGCC GGGCAACCGGATCCGCGGCGAG CGTCC CTCCCCGAGG-TCCGGATGCCC CTTCTCGGCGCCGCA CMM_1175 1340590 - 1341780 + | hypothetical protein CMM_1176 1341777 - 1342613 + | putative protein serine/threonine phosphatase dapD 1343642 - 1342644 - | putative 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase dapE 1343723 - 1344820 + | dipeptidase CMM_1179 1344802 - 1346034 + | hypothetical protein CMM_1180 1346182 - 1346355 + | hypothetical protein TERM 290 1346375 - 1346409 + T 100 -33 -2.62184 | overlap 1346377 GACCGCATCACGCGA CACCGCCCGCCCCGTC GAC GACGGGGCGGGCGGTG TCGTCTGCGCGGGGC TERM 291 1346377 - 1346407 + T 100 -29.8 -2.85351 | overlap 1346375 CCGCATCACGCGACA CCGCCCGCCCCGTC GAC GACGGGGCGGGCGG TGTCGTCTGCGCGGG CMM_1181 1347097 - 1346465 - | putative O-methyltransferase tatB 1347248 - 1347622 + | putative sec-independent protein translocase protein, twin arginine pathway CMM_1183 1348585 - 1347668 - | LysR family transcriptional regulator CMM_1184 1348665 - 1348823 + | hypothetical protein TERM 292 1348833 - 1348891 + T 100 -28.3 -3.21747 | gap 1, overlap 1348834 GTGTAGGCAGCGCCC GCAG-CACGCACGAGGAGGACGGCAGCC CGCG GGCTGCCGTCCTCCTCGTGCGTCACGGG TTCGTCGTCGGGTCC TERM 293 1348834 - 1348890 + T 100 -31.8 -2.52834 | gap 1, overlap 1348833 TGTAGGCAGCGCCCG CAG-CACGCACGAGGAGGACGGCAGCC CGCG GGCTGCCGTCCTCCTCGTGCGTCACGG GTTCGTCGTCGGGTC CMM_1185 1350090 - 1348915 - | putative ATP-binding protein CMM_1186 1350628 - 1350080 - | hypothetical protein CMM_1187 1351958 - 1350612 - | Mg2+ transporter CMM_1188 1352017 - 1352685 + | hypothetical protein pepP2 1354336 - 1352714 - | putative Xaa-Pro aminopeptidase CMM_1190 1355422 - 1354385 - | putative membrane protein with hydrolase activity CMM_1191 1355503 - 1356378 + | hypothetical protein rhlE 1357996 - 1356467 - | putative ATP-dependent RNA helicase CMM_1193 1358104 - 1358865 + | hypothetical protein CMM_1194 1359234 - 1358947 - | hypothetical protein CMM_1195 1359468 - 1359244 - | hypothetical protein uvrD1 1359662 - 1362931 + | putative ATP-dependant DNA helicase/nuclease TERM 294 1363629 - 1363599 - gT 70 -13.8 -3.21099 | CGCCCGGATCAGGAA GGCCCCGGCGGCCG AGG CGGTCGCCGCGGTC GGCGCGCTGCCGCCG CMM_1198 1367192 - 1366116 - | putative phosphotransferase uvrD2 1362928 - 1366203 + | putative ATP-dependent DNA helicase TERM 295 1366268 - 1366315 + gF 71 -14.8 -3.0263 | gap 1, overlap 1366311 GCGTCTCGTGCGCGA TGCGCTG-GCCCTCGTCGGCGCG CAC CGTGTCGACGAGCGCGCTGAGCA TGTTGACGGCGTCGT CMM_1199 1367328 - 1368281 + | putative NTP pyrophosphohydrolase CMM_1201 1370956 - 1370069 - | hypothetical protein uvrD3 1368292 - 1370205 + | putative ATP-dependent DNA helicase CMM_1202 1372502 - 1371099 - | hypothetical protein CMM_1203 1372715 - 1373806 + | ATP-dependant serine protease CMM_1204 1373947 - 1376898 + | conseved membrane protein TERM 296 1377169 - 1377133 - T 100 -20.9 -3.61398 | opp_overlap 1377133 1377136 1377139, overlap 1377135 1377136 1377139 CTGCCCCCGCAACAA GATGAAGGCCCGGTCTC CTC GAGACCGGGCCTTCTGC TTTTCCTGGACGCGA TERM 297 1377133 - 1377169 + T 100 -20.9 -4.25104 | opp_overlap 1377133 1377135 1377136 1377139, overlap 1377136 1377139 CTGCCCCCGCAACAA GATGAAGGCCCGGTCTC CTC GAGACCGGGCCTTCTGC TTTTCCTGGACGCGA TERM 298 1377167 - 1377135 - T 100 -22.1 -3.38812 | opp_overlap 1377133 1377136 1377139, overlap 1377133 1377136 1377139 GCCCCCGCAACAAGA TGAAGGCCCGGTCTC CTC GAGACCGGGCCTTCT GCTTTTCCTGGACGC TERM 299 1377136 - 1377166 + T 100 -25.6 -3.13504 | opp_overlap 1377136 1377135 1377133 1377139, overlap 1377133 1377139 CCCCCGCAACAAGAT GAAGGCCCGGTCTC CTC GAGACCGGGCCTTC TGCTTTTCCTGGACG TERM 300 1377166 - 1377136 - T 95 -25.6 -2.63073 | opp_overlap 1377133 1377136 1377139, overlap 1377135 1377133 1377139 CCCCCGCAACAAGAT GAAGGCCCGGTCTC CTC GAGACCGGGCCTTC TGCTTTTCCTGGACG TERM 301 1377139 - 1377163 + T 100 -21.5 -3.70546 | opp_overlap 1377139 1377136 1377135 1377133, overlap 1377136 1377133 CCGCAACAAGATGAA GGCCCGGTCTC CTC GAGACCGGGCC TTCTGCTTTTCCTGG TERM 302 1377163 - 1377139 - T 100 -21.5 -3.46509 | opp_overlap 1377136 1377133 1377139, overlap 1377136 1377135 1377133 CCGCAACAAGATGAA GGCCCGGTCTC CTC GAGACCGGGCC TTCTGCTTTTCCTGG CMM_1205 1377873 - 1377208 - | putative peroxiredoxin CMM_1206 1379713 - 1377992 - | putative protein kinase CMM_1207 1380282 - 1379710 - | PadR family transcriptional regulator lipA 1381406 - 1380411 - | lipoyl synthase lipB 1382104 - 1381403 - | lipoyltransferase CMM_1210 1382208 - 1383107 + | putative siderophore-interacting protein CMM_1211 1383261 - 1383848 + | hypothetical protein CMM_1212 1383874 - 1384521 + | hypothetical protein CMM_1213 1384572 - 1385234 + | hypothetical protein CMM_1214 1385583 - 1385245 - | hypothetical protein CMM_1215 1386030 - 1389488 + | hypothetical protein CMM_1216 1390244 - 1389546 - | CDF family cation efflux protein CMM_1217 1390594 - 1390241 - | ArsR family transcriptional regulator CMM_1218 1390705 - 1391142 + | hypothetical protein CMM_1219 1391800 - 1391174 - | TetR family transcriptional regulator CMM_1220 1391878 - 1393194 + | putative carboxylesterase CMM_1221 1393337 - 1394131 + | hypothetical protein CMM_1222 1395008 - 1394148 - | putative hydrolase CMM_1223 1395571 - 1395005 - | putative acetyltransferase CMM_1224 1395742 - 1395936 + | hypothetical protein CMM_1225 1397793 - 1396033 - | putative ATP-dependent RNA helicase CMM_1226 1398641 - 1397886 - | hypothetical protein CMM_1227 1399578 - 1398721 - | putative methyltransferase CMM_1228 1399626 - 1400255 + | Cro/CI family transcriptional regulator CMM_1229 1401739 - 1400252 - | hypothetical protein CMM_1230 1402093 - 1401878 - | hypothetical protein CMM_1231 1402871 - 1402248 - | putative carboxylesterase/phospholipase CMM_1232 1403845 - 1402868 - | putative dioxygenase CMM_1233 1404470 - 1403907 - | hypothetical protein TERM 303 1405629 - 1405653 + G 73 -15 -3.28416 | overlap 1405608 CGCGCTGATCTTCGT GCCCGCGGTC TTCGC GATCGCGGGC TTCATGTCGATCATC CMM_1234 1404553 - 1405680 + | hypothetical protein CMM_1235 1406126 - 1405686 - | hypothetical protein CMM_1236 1406232 - 1406501 + | hypothetical protein TERM 304 1406518 - 1406552 + F 100 -28.7 -2.70932 | CCGCCGACACGCCCG CGAGGAGCCGCCCGG AATGC CCGGGCGGCTCCTCG TCGTTGGGGCAGGGG CMM_1237 1406568 - 1407698 + | putative NDP-sugar phosphate epimerase CMM_1238 1408923 - 1407685 - | hypothetical protein CMM_1239 1409053 - 1409979 + | putative multidrug ABC transporter, ATPase component CMM_1240 1409976 - 1410839 + | putative multidrug ABC transporter, permease component CMM_1241 1410843 - 1412144 + | putative two-component system, sensor kinase CMM_1242 1412141 - 1412815 + | putative two-component system, response regulator CMM_1243 1413116 - 1414258 + | putative sugar ABC transporter, substrate-binding protein CMM_1244 1414382 - 1415926 + | putative sugar ABC transporter, ATP-binding protein CMM_1245 1415923 - 1417131 + | putative sugar ABC transporter, permease component CMM_1246 1417252 - 1417536 + | hypothetical protein sipX 1418346 - 1417546 - | putative signal peptidase I CMM_1248 1419275 - 1418373 - | hypothetical protein CMM_1249 1419874 - 1419272 - | hypothetical protein CMM_1250 1420516 - 1419971 - | hypothetical protein CMM_1251 1420874 - 1422520 + | putative two-component system, sensor histidine kinase TERM 305 1424386 - 1424356 - g 70 -16.9 -2.62184 | TCGCGGTCGAGATGA TGCGCGACGCCGT GGTCA ACGGCGTCGAGCA GCACGGCGACCACTT CMM_1252 1422657 - 1424486 + | BCCT family choline/glycine betaine transporter TERM 306 1424537 - 1424507 - f 100 -24 -3.22298 | opp_overlap 1424507 GCCACGCACGACGAA GCCGACCCGCGCCC TGT GCGCGCGGGTCGGC TTCGTCGTCCGGTCC TERM 307 1424507 - 1424537 + F 100 -24 -3.21747 | opp_overlap 1424507 GCCACGCACGACGAA GCCGACCCGCGCCC TGT GCGCGCGGGTCGGC TTCGTCGTCCGGTCC TERM 308 1425453 - 1425420 - g 70 -16.7 -2.57132 | gap 1, overlap 1425419 GTCGCGTGGGAGAAC GGCGTCGTCC-GCCGC ACC GCAGCCGGCCGACGCC TCATGGGCCCCGAGA CMM_1253 1424616 - 1425632 + | putative diacylglycerol kinase CMM_1254 1425688 - 1426866 + | putative ATPase CMM_1255 1428094 - 1426991 - | putative fatty acid desaturase CMM_1256 1429455 - 1428412 - | putative Zn-dependent alcohol dehydrogenase CMM_1257 1430248 - 1429505 - | hypothetical protein CMM_1258 1430413 - 1431060 + | hypothetical protein CMM_1259 1434114 - 1431088 - | putative alpha-mannosidase CMM_1260 1435142 - 1434234 - | putative sugar ABC transporter, permease component CMM_1261 1436149 - 1435145 - | putative sugar ABC transporter, permease component CMM_1262 1437543 - 1436152 - | putative sugar ABC transporter, substrate binding protein CMM_1263 1438986 - 1437721 - | ROK family transcriptional regulator CMM_1264 1439158 - 1440297 + | hypothetical protein CMM_1265 1440294 - 1440596 + | hypothetical protein CMM_1266 1441524 - 1440613 - | putative Zn-metalloprotease CMM_1267 1442185 - 1441556 - | putative DNA alkylation repair enzyme CMM_1268 1443195 - 1442182 - | putative NAD-dependant epimerase CMM_1269 1443824 - 1443309 - | hypothetical protein clpS 1444195 - 1443821 - | putative ATP-dependent Clp protease adaptor protein CMM_1271 1444982 - 1444284 - | putative two-component system, response regulator CMM_1272 1446223 - 1444979 - | putative two-component system sensor kinase CMM_1273 1447158 - 1446319 - | putative ABC transporter, permease component CMM_1274 1448090 - 1447155 - | putative multidrug ABC transporter, ATP-binding protein CMM_1275 1449426 - 1448221 - | putative aminotransferase CMM_1276 1449499 - 1450152 + | hypothetical protein CMM_1277 1450416 - 1451048 + | hypothetical protein TERM 309 1452724 - 1452688 - g 70 -13.6 -3.21416 | CATCCCCATCAGCAA GGCGAGCGACCTCACC GCTCA GGTGCGGGCCCTCGCC GGCGGCAGCGCTGCT CMM_1278 1451273 - 1452808 + | putative serine protease CMM_1279 1452959 - 1454032 + | putative glycosyl transferase TERM 310 1454347 - 1454385 + G 71 -15.9 -3.14344 | TGCTGCGACGGCGAG GTGGCGCGCTGGCGCCG CACGT CGTCGCCGGTGGGCCAC TTCCTCGACGCCGTC CMM_1280 1454029 - 1454850 + | putative transferase, putative phosphatidylglycerophosphate synthase CMM_1281 1454847 - 1455722 + | putative glycosyltransferase CMM_1282 1455820 - 1457106 + | putative CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase CMM_1283 1457902 - 1457153 - | hypothetical protein CMM_1284 1458057 - 1458380 + | Cro/CI family transcriptional regulator CMM_1285 1458681 - 1458370 - | hypothetical protein CMM_1286 1459545 - 1458766 - | putative polysaccharide/polyol phosphate ABC transporter, ATP-binding protein tagG 1460345 - 1459545 - | putative polysaccharide/polyol phosphate ABC transporter, permease component CMM_1288 1461074 - 1460382 - | putative sugar nucleotidyltransferase CMM_1289 1462342 - 1463223 + | putative ABC transporter, ATP-binding protein CMM_1290 1463199 - 1464770 + | membrane protein, putative ABC transporter permease component CMM_1291 1464824 - 1465111 + | hypothetical protein pncB 1466452 - 1465136 - | nicotinate phosphoribosyltransferase TERM 311 1465973 - 1465937 - G 71 -14.9 -3.14881 | GAAGCCCGCGATGAA GGCCGCGCGCGCGGCGG CGA CGGCCGAGCGCTCGCCC GTGCGGCGGGATCCC CMM_1293 1466543 - 1468006 + | hypothetical protein murI 1468065 - 1468949 + | glutamate racemase rph 1468958 - 1469695 + | ribonuclease PH TERM 312 1469897 - 1469862 - g 71 -15.4 -3.14881 | gap 1, overlap 1469850 GAACGCGCTCATCAA GGCGCGTGCCGCCGCGC TGC ACACGG-GGCACGCGGC GCTCGCGGACGACTC TERM 313 1469930 - 1469950 + G 70 -14.7 -3.21395 | overlap 1469928 GCATCTCCGTCGATA TCCTGGGCG GAT CGCCCGGGA TCTTCTCGGCGCGCT CMM_1296 1469707 - 1470315 + | putative xanthosine triphosphate pyrophosphatase czcD 1470406 - 1471323 + | cobalt-zinc-cadmium efflux permease,CDF family CMM_1298 1472106 - 1471378 - | hypothetical protein CMM_1299 1472374 - 1473798 + | putative xylulose kinase TERM 314 1474404 - 1474433 + G 82 -19.3 -3.15544 | GACCACCTCGTCGCC CTCGGCAGCCTGC CGCT GCAGGCCGCCGAG TTCCTGCGCATGAGC CMM_1300 1473870 - 1475105 + | putative ATPase, type II/type IV pathway secretion protein CMM_1301 1475102 - 1475965 + | membrane protein, putative pilus assembly protein CMM_1302 1475962 - 1476912 + | membrane protein, putative pilus assembly protein CMM_1303 1476963 - 1477157 + | hypothetical protein CMM_1304 1477157 - 1477534 + | hypothetical protein CMM_1305 1477509 - 1477964 + | hypothetical protein CMM_1306 1477961 - 1478500 + | putative secreted protein CMM_1307 1479815 - 1478508 - | putative MFS permease prfB 1479891 - 1480994 + | peptide chain release factor RF-2 ftsE 1481070 - 1482737 + | putative ABC transporter, ATP-binding protein involved in cell division ftsX 1482734 - 1483651 + | putative ABC transporter, permease component,involved in cell division smpB 1483718 - 1484194 + | SsrA-binding protein TERM 315 1484759 - 1484796 + T 100 -31.5 -3.05343 | opp_overlap 1484766, overlap 1484766 CGGATCCCTCCGGCA CGACGAAGGCCCCGTCC ACCC GGACGGGGCCTTCGTCG TGTTCGCCGTATGGA TERM 316 1484789 - 1484766 - T 86 -19.6 -3.21099 | opp_overlap 1484759 1484766 CTCCGGCACGACGAA GGCCCCGTCC ACCC GGACGGGGCC TTCGTCGTGTTCGCC TERM 317 1484766 - 1484789 + T 86 -19.6 -3.27923 | opp_overlap 1484766, overlap 1484759 CTCCGGCACGACGAA GGCCCCGTCC ACCC GGACGGGGCC TTCGTCGTGTTCGCC TERM 318 1484827 - 1484880 + T 70 -15.1 -2.85668 | gap 1 TCAGCCCACCGGCGT GCGCGGCGCCGTCGGGGCGGGCGCTC CGG GGTCGCTCGTCGCGAGGGC-CGGCGC TGTCGTCTCCAGCTC CMM_1312 1486623 - 1484812 - | putative iron ABC transporter, permease component CMM_1313 1487654 - 1486626 - | putative iron ABC transporter, ATPase component TERM 319 1487597 - 1487571 - G 72 -12.2 -3.63991 | GAGGAGCGTGAAGAA CTCGCCCTCGTG GAT CTCGAGGTCGAG CCCCGGGATCGCCAC CMM_1314 1488736 - 1487654 - | putative iron ABC transporter, substrate-binding protein TERM 320 1488451 - 1488461 + g 71 -8.2 -4.02817 | opp_overlap 1488445, overlap 1488440 GGCCGAACACCACGT CCCC GAC GGGG TTGTTCTTCTCCGCC CMM_1315 1488976 - 1490478 + | putative MFS-type efflux protein CMM_1316 1491322 - 1490510 - | putative monophosphatase CMM_1317 1492409 - 1491333 - | putative GTPase aroA 1493869 - 1492406 - | 3-phosphoshikimate 1-carboxyvinyltransferase sigH 1493934 - 1494758 + | ECF subfamily RNA polymerase sigma factor rsrA 1494755 - 1494997 + | putative anti-sigma factor CMM_1321 1495033 - 1495473 + | putative acetyl transferase TERM 321 1495512 - 1495547 + T 100 -29.2 -3.01712 | opp_overlap 1495517 CGCACGCCTGCACGA CGAGAGGCCCGATCCC CTGG GGGATCGGGCCTCTCG TCTTGCCGGGCGCGA TERM 322 1495542 - 1495517 - T 86 -20.5 -2.82516 | opp_overlap 1495512 GCCTGCACGACGAGA GGCCCGATCCC CTGG GGGATCGGGCC TCTCGTCTTGCCGGG kgd 1499392 - 1495574 - | alpha-ketoglutarate decarboxylase TERM 323 1499086 - 1499133 + g 74 -16.3 -3.13403 | gap 3, overlap 1499083 1499126 GCTGCGCCTGCGCGT CGGGCTGGCCGGCG--GACG-CGG GGG CCGGCGTCGGCGCCGGGCTGCCCG TGTTGGTCGACGCGG guaB3 1499573 - 1501012 + | inositol-5-monophosphate dehydrogenase CMM_1324 1501126 - 1502556 + | hypothetical protein CMM_1325 1502549 - 1503592 + | hypothetical protein CMM_1326 1504741 - 1503662 - | putative oxidoreductase CMM_1327 1504825 - 1505757 + | hypothetical protein CMM_1328 1506434 - 1505754 - | hypothetical protein CMM_1329 1506642 - 1506959 + | hypothetical protein CMM_1330 1507035 - 1508315 + | putative MFS permease CMM_1331 1509011 - 1508355 - | putative two-component system response regulator CMM_1332 1510271 - 1509039 - | hypothetical protein CMM_1333 1511422 - 1510268 - | putative two-component system sensor kinase CMM_1334 1512273 - 1511593 - | putative two-component system response regulator metX 1513562 - 1512393 - | homoserine O-acetyltransferase metY 1515016 - 1513646 - | O-acetylhomoserine aminocarboxypropyltransferase CMM_1337 1515152 - 1515949 + | putative oxidoreductase CMM_1338 1516662 - 1515988 - | TetR family transcriptional regulator CMM_1339 1516782 - 1517852 + | TerC family integral membrane export protein CMM_1340 1517849 - 1518670 + | putative serine/threonine protein phosphatase TERM 324 1519060 - 1519023 - g 72 -12 -3.61715 | gap 1 CACCCTGCGCAAGAA CGCCGA-GGAGTTCGGG ATCCG CCTGCACTCCCTCGGCG ACATCGAGCAGGGCA leuC 1518748 - 1520217 + | isopropylmalate isomerase large subunit leuD 1520220 - 1520834 + | isopropylmalate isomerase small subunit murA 1520877 - 1522205 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 325 1522499 - 1522554 + G 81 -18.3 -3.04144 | overlap 1522517 CGACCCCGTCGTGAT G-GGCGCCGTGGCGTGGAAGCTCGGGC GCCT GCCCC-GCTTCCTCGCCAAGGCGTCGC TGTTCGACGTGCCGG CMM_1344 1522329 - 1523066 + | putative sugar phosphate acyltransferase gpsA 1523074 - 1524126 + | hypothetical protein TERM 326 1525035 - 1525064 + G 84 -15 -3.71848 | CGCGCCTTCCGGGCC GTCGACGCGCGC GGGCTG GCGCGCGTGGAC TTCTTCCTCACGGCG ddlC 1524129 - 1525238 + | D-alanine-D-alanine ligase CMM_1347 1525341 - 1526258 + | putative glycosyltransferase CMM_1348 1526727 - 1526215 - | hypothetical protein thiL 1526752 - 1527837 + | thiamin-monophosphate kinase CMM_1350 1528445 - 1527834 - | putative DNA methylase CMM_1351 1528715 - 1529674 + | putative regulatory protein, ATPase CMM_1352 1529700 - 1531007 + | hypothetical protein CMM_1353 1531004 - 1533547 + | putative membrane-bound protease TERM 327 1534242 - 1534191 - g 70 -13.6 -3.29144 | gap 1, opp_overlap 1534194, overlap 1534194 CCACCGTCCCGAGAA GGACGTCGACTGGAAGCGC-GGCCG CGA CGCCCTGCGCTTCCAGGAGGCGTTC GTCCTCCAGACCGCG TERM 328 1534194 - 1534239 + G 77 -16.1 -3.21099 | gap 1, opp_overlap 1534191 1534194 CCGTCCCGAGAAGGA CGTCGACTGGAAGCGC-GGCCG CGA CGCCCTGCGCTTCCAGGAGGCG TTCGTCCTCCAGACC recG 1533544 - 1535727 + | ATP-dependent DNA helicase coaD 1535754 - 1536245 + | hypothetical protein CMM_1356 1536265 - 1536837 + | hypothetical protein rpmF 1536840 - 1537043 + | 50S ribosomal protein L32 rnc 1537069 - 1537785 + | ribonuclease III TERM 329 1537885 - 1537920 + G 74 -16.1 -3.15861 | GAGATCCTCGACGCG CGCTCCCTCAAGCGG CACGAT CCGCTCGAGGGCGCG TTCGTCGACCTGCTC fpgA 1537792 - 1538727 + | formamidopyrimidine-DNA glycosylase CMM_1360 1539858 - 1538740 - | putative acetyltransferase smcA 1540015 - 1543770 + | putative chromosome segregation ATPase ftsY 1543791 - 1544666 + | Signal recognition particle component ffhA 1544729 - 1546300 + | signal recognition particle protein CMM_1364 1546445 - 1546822 + | putative lyase CMM_1365 1548031 - 1546832 - | membrane-associated serine protease CMM_1366 1549196 - 1548045 - | hypothetical protein rpsP 1549452 - 1549865 + | 30S ribosomal protein S16 TERM 330 1550005 - 1549947 - g 73 -18.1 -2.57795 | gap 1, overlap 1549943 1549944 GTGACGAGCAAGGGA TCCCCCCGGGGCGAGGTCCTCGAGGTGC GCGT GCACCCCGAGGACCTCGGCC-GGGTCAT CGGCCGGGCGGGTCG CMM_1368 1549869 - 1550105 + | hypothetical protein rimM 1550137 - 1550718 + | putative 16S rRNA processing protein trmD 1550720 - 1551406 + | putative tRNA (guanine-N1)-methyltransferase mapA1 1552193 - 1551426 - | putative methionine aminopeptidase CMM_1372 1552264 - 1552755 + | hypothetical protein TERM 331 1552763 - 1552777 + F 75 -12.8 -3.59979 | TGGACTGACTCCGTC GCGCGG ACC CCGCGC TTTGCGCTCGACGCG rplS 1552926 - 1553270 + | 50S ribosomal protein L19 TERM 332 1553289 - 1553332 + F 75 -16 -3.05384 | ATCCCCACCTGTCAT CCCACTGAGCTCCCGGCG CATATGCT TGCCGGGAGCTCAGGCGG TTAAATGACAGACAG lepB 1553337 - 1554089 + | putative signal peptidase I rnhB 1554089 - 1554748 + | ribonuclease HII CMM_1376 1554822 - 1555145 + | hypothetical protein CMM_1377 1555257 - 1555613 + | putative endonuclease CMM_1378 1555613 - 1557169 + | putative ATP-dependant serine protease CMM_1379 1557364 - 1558659 + | hypothetical protein xerC 1558833 - 1559729 + | integrase/recombinase CMM_1381 1560351 - 1559800 - | M23B family metallopeptidase CMM_1382 1560452 - 1561927 + | putative sugar MFS permease TERM 333 1561921 - 1561903 - f 72 -11.6 -3.6968 | overlap 1561894 CGACAAGCCCAAGAA GCGCTCGG AGG CCGCGCGC GCCTGATCCGACGCG rpsB 1562166 - 1563113 + | 30S ribosomal protein S2 tsf 1563223 - 1564050 + | elongation factor Ts TERM 334 1564061 - 1564092 + F 100 -27.4 -3.39327 | CCTAGCACCACCACG GGGAGCCCGGGTCG CATG CGACCCGGGCTCCC TTCTCCATGTCCGGG pyrH 1564207 - 1564923 + | hypothetical protein frrA 1565037 - 1565594 + | hypothetical protein cdsA 1565595 - 1566635 + | putative phosphatidate cytidylyltransferase CMM_1388 1566646 - 1567191 + | hypothetical protein CMM_1389 1567295 - 1567999 + | hypothetical protein CMM_1390 1568070 - 1569800 + | CPA1 family Na+/H+ antiporter CMM_1391 1569836 - 1570132 + | putative ATP-/GTP-binding protein CMM_1392 1570129 - 1570863 + | hypothetical protein CMM_1393 1571950 - 1570892 - | AI-E2 family membrane protein CMM_1394 1573755 - 1571980 - | hypothetical protein CMM_1395 1574038 - 1575897 + | hypothetical protein TERM 335 1576614 - 1576577 - g 81 -17.8 -3.30124 | gap 2 CGCCATCGCGCAGAA CCCGCGCGACGCCCTCGC GGTC GCG-GGGC-TCGCGCAGG TCAGCCTCCTGGAGC CMM_1396 1575894 - 1576898 + | putative thioredoxin TERM 336 1576919 - 1576956 + T 100 -32.9 -2.62616 | CTCCCGCCCGCACGA CGACGGCGCCGCATCCC CGAG GGGATGCGGCGCCGTCG TCATGTGCGCGGTCC glgB 1579553 - 1576974 - | glycogen branching enzyme CMM_1398 1581697 - 1579559 - | putative glycosidase glgP 1582236 - 1584791 + | putative glucan phosphorylase CMM_1400 1586138 - 1584831 - | hypothetical protein glgX 1588373 - 1586295 - | putative glycosyl hydrolase csdA 1588372 - 1589577 + | putative cysteine desulfurase trmU 1589574 - 1590737 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase ligA 1590745 - 1593306 + | NAD-dependent DNA ligase LigA CMM_1405 1593419 - 1594801 + | hypothetical protein CMM_1406 1595268 - 1594813 - | putative secreted protein gatC 1595316 - 1595684 + | glutamyl-tRNA(Gln) amidotransferase subunit C gatA 1595692 - 1597239 + | aspartyl/glutamyl-tRNA amidotransferase subunit A gatB 1597239 - 1598741 + | aspartyl/glutamyl-tRNA amidotransferase subunit B CMM_1410 1598738 - 1600375 + | putative ABC transporter ATP-binding protein CMM_1411 1602049 - 1600400 - | putative secreted protein CMM_1412 1602196 - 1602912 + | hypothetical protein CMM_1413 1603039 - 1603707 + | hypothetical protein CMM_1414 1605444 - 1603756 - | acyl-CoA synthetase CMM_1415 1605987 - 1605541 - | hypothetical protein CMM_1416 1607509 - 1606061 - | putative dehydrogenase CMM_1417 1608517 - 1607519 - | short chain dehydrogenase CMM_1418 1610303 - 1608615 - | acyl-CoA synthetase TERM 337 1610345 - 1610321 - R 82 -18.6 -3.14468 | CCCCACCATAGGGAA TGCGCCCGGG GGGAT CCCGGGCGCA TCGGCCGTGCATCGG CMM_1419 1611297 - 1610368 - | putative short chain dehydrogenase/oxidoreductase argE 1611781 - 1612998 + | putative acetylornithine deacetylase CMM_1421 1613486 - 1612995 - | putative phosphoesterase CMM_1422 1613567 - 1614100 + | putative acetyltransferase CMM_1423 1614159 - 1614773 + | putative sulfite oxidase TERM 338 1615170 - 1615190 + G 77 -18.3 -2.74012 | CGGTCGCGCTCGGCG GCGGCACCG GCG CGGTGCCGC TCGTTGCGATGGTCC CMM_1424 1614770 - 1615516 + | putative oxidoreductase CMM_1425 1615581 - 1616114 + | hypothetical protein CMM_1426 1616230 - 1617228 + | hypothetical protein dinB 1617311 - 1618603 + | DNA polymerase IV CMM_1428 1618615 - 1619118 + | hypothetical protein udgA 1620480 - 1619167 - | UDP-glucose 6-dehydrogenase treZ 1622452 - 1620650 - | maltooligosyl trehalose trehalohydrolase treY 1624800 - 1622449 - | maltooligosyltrehalose synthase treX 1627001 - 1624797 - | putative glucan debranching enzyme CMM_1433 1627212 - 1627544 + | hypothetical protein CMM_1434 1627819 - 1628481 + | putative ABC-type transporter, permease component CMM_1435 1628484 - 1630046 + | putative ABC transporter, ATP-binding protein CMM_1436 1630043 - 1630837 + | putative ABC transporter, permease component CMM_1437 1630827 - 1631375 + | hypothetical protein CMM_1438 1631385 - 1631657 + | hypothetical protein CMM_1439 1632102 - 1631752 - | hypothetical protein TERM 339 1632231 - 1632194 - R 93 -23.5 -2.62983 | overlap 1632199 CGGAGGGGGAGACGA CGGAAGGGCCGGGACCC TCTC GGATCCCGGCCCTTCCC GGTGGGGTGGACGAC TERM 340 1632226 - 1632199 - R 87 -20.6 -3.11634 | overlap 1632194 GGGGAGACGACGGAA GGGCCGGGACCC TCTC GGATCCCGGCCC TTCCCGGTGGGGTGG ornA 1632974 - 1632354 - | oligoribonuclease CMM_1441 1633031 - 1633246 + | hypothetical protein CMM_1442 1633300 - 1633611 + | putative thioredoxin nadE 1633739 - 1634560 + | NAD synthetase CMM_1444 1635346 - 1634639 - | hypothetical protein CMM_1445 1635664 - 1635428 - | hypothetical protein msrA 1635835 - 1636362 + | putative peptide methionine sulfoxide reductase CMM_1447 1636462 - 1636692 + | hypothetical protein CMM_1448 1636758 - 1637201 + | hypothetical protein CMM_1449 1637198 - 1637761 + | MarR family transcriptional regulator CMM_1450 1637758 - 1638231 + | putative secreted protein CMM_1451 1638295 - 1639977 + | putative ABC transporter ATP-binding protein CMM_1452 1639982 - 1640461 + | putative thioesterase tesB 1641387 - 1640482 - | putative acyl-CoA thioesterase II CMM_1454 1641471 - 1642166 + | hypothetical protein glbO 1642589 - 1642194 - | hemoglobin-like protein CMM_1456 1643908 - 1642589 - | hypothetical protein pepN 1646614 - 1644071 - | hypothetical protein CMM_1458 1646766 - 1647392 + | hypothetical protein rpiA 1647509 - 1647997 + | ribose-5-phosphate isomerase B mutM 1648004 - 1648993 + | putative formamidopyrimidine-DNA glycosylase involved in DNA repair TERM 341 1649162 - 1649126 - T 100 -24.6 -3.01924 | gap 1 CACTGTGCGCGAAGA CGGAGGGGCCCGGATCC AGTC GGATCCGGGCCCCTC-G ACCGTCGGCGTGCTG dpsA 1649678 - 1649193 - | putative stress induced DNA-binding protein CMM_1462 1655266 - 1649831 - | hypothetical protein TERM 342 1651394 - 1651448 + g 78 -17.7 -3.14564 | gap 1 GTCGGCGGCATGCCG GACGGCGCCGGCGACCG-CACCGGGC GCGC GTCCGGGGACCGTCGCCGGTGCCGGG TTCCTCAGACGATCG TERM 343 1656753 - 1656696 - g 74 -17.7 -2.78463 | overlap 1656706 1656742 1656743 AGGCCCGCGACCAGA TCGTCGACAAGCTCCTCGAGGGCGTCG AGAT CCCCGTCCCCGAGAAGCTCGTCGAGGA CGAGGTGCAGCGCCA tig 1655837 - 1657291 + | trigger factor TERM 344 1657503 - 1657517 + G 83 -7.8 -4.57569 | opp_overlap 1657503 CAATGGCCGAACCGA CACTGG TAC CCGGTG TTTTTGACCGACTGC clpP1 1657490 - 1658077 + | ATP-dependent protease, proteolytic subunit clpP2 1658114 - 1658794 + | ATP-dependent Clp protease proteolytic subunit TERM 345 1658810 - 1658841 + T 100 -27.4 -3.25823 | opp_overlap 1658812 GCCCGCACCGCGGAA GAGGGGCGGTCGGC ATCA GCCGACCGCCCCTC TTCCTGTCCCGGACG TERM 346 1658839 - 1658812 - T 100 -24.2 -3.03124 | opp_overlap 1658810 CCGCACCGCGGAAGA GGGGCGGTCGGC ATCA GCCGACCGCCCC TCTTCCTGTCCCGGA CMM_1466 1660001 - 1658859 - | putative monooxygenase clpX 1660153 - 1661433 + | ATP-dependent protease ATP-binding subunit TERM 347 1661461 - 1661498 + T 100 -28.5 -2.62184 | opp_overlap 1661461 1661466, overlap 1661466 ACCGCCGGCAGACGA CGAGAGCGCCGCACCCC GTGA GGGGCGCGGCGCTCTCG TCATGTGGGGCCCGG TERM 348 1661498 - 1661461 - T 100 -30.7 -2.62263 | opp_overlap 1661461 1661466, overlap 1661466 ACCGCCGGCAGACGA CGAGAGCGCCGCACCCC GTGA GGGGCGCGGCGCTCTCG TCATGTGGGGCCCGG TERM 349 1661493 - 1661466 - T 90 -22 -2.84634 | opp_overlap 1661461 1661466, overlap 1661461 CGGCAGACGACGAGA GCGCCGCACCCC GTGA GGGGCGCGGCGC TCTCGTCATGTGGGG TERM 350 1661466 - 1661493 + T 86 -19.8 -2.84634 | opp_overlap 1661466 1661461, overlap 1661461 CGGCAGACGACGAGA GCGCCGCACCCC GTGA GGGGCGCGGCGC TCTCGTCATGTGGGG dcpA 1663578 - 1661515 - | putative peptidyl-dipeptidase CMM_1469 1663618 - 1664421 + | putative methylase CMM_1470 1664697 - 1664434 - | hypothetical protein CMM_1471 1665149 - 1664697 - | GNAT family acetyltransferase valS 1667791 - 1665146 - | valyl-tRNA synthetase pckA 1669867 - 1667927 - | phosphoenolpyruvate carboxykinase TERM 351 1670984 - 1670962 - g 76 -14.8 -3.41527 | CAAGGCGTACGAGAA CGACGGGCTG CCG CTGCCCGTCG ACGTCACGGGCGCGG CMM_1474 1669979 - 1671406 + | Cro/CI family transcriptional regulator CMM_1475 1673089 - 1671425 - | putative oligopeptide ABC transporter, ATP-binding protein CMM_1476 1673946 - 1673086 - | putative oligopeptide ABC transporter, permease component CMM_1477 1675013 - 1673943 - | putative oligopeptide ABC transporter, permease component CMM_1478 1676656 - 1675010 - | putative oligopeptide ABC transporter, substrate-binding protein TERM 352 1675820 - 1675862 + g 79 -16.9 -3.36327 | gap 1 GTCGAGCTCGCCGAG CGCGCCGCCCGCCGTGG-CG GAGA CGATCGCGTCGGGCTGCGCG TTGTCGATCACGTCG CMM_1479 1676761 - 1677366 + | TetR family transcriptional regulator expA 1677476 - 1678237 + | putative expansin CMM_1481 1678314 - 1679063 + | putative SAM-dependant methyltransferase ileS 1679310 - 1682612 + | isoleucyl-tRNA synthetase folC 1682609 - 1684183 + | hypothetical protein CMM_1484 1684180 - 1684677 + | hypothetical protein ndkA 1684687 - 1685106 + | hypothetical protein TERM 353 1685110 - 1685162 + T 100 -37.9 -2.62184 | opp_overlap 1685123, overlap 1685123 CTCTGGTTCTAGGAC CCGCACGACCAGAGGGGCCGACCGG GAT CCGGTCGGCCCCTCTGGTCGTCCCG TCGTCTCAGCCGAGC TERM 354 1685123 - 1685149 + T 95 -25.2 -2.82834 | opp_overlap 1685123, overlap 1685110 ACCCGCACGACCAGA GGGGCCGACCGG GAT CCGGTCGGCCCC TCTGGTCGTCCCGTC TERM 355 1685149 - 1685123 - T 95 -25.2 -2.82635 | opp_overlap 1685123 1685110 ACCCGCACGACCAGA GGGGCCGACCGG GAT CCGGTCGGCCCC TCTGGTCGTCCCGTC CMM_1486 1685776 - 1685168 - | hypothetical protein TERM 356 1687068 - 1687035 - g 75 -13.1 -3.65046 | gap 1 CCTCGAGGCCAAGAA GCAG-CGCCGCCGCGA CGG TCGCGACGCCGGCCGC CGCCGTCCGGTGCTC TERM 357 1688979 - 1688947 - g 70 -16.9 -2.62263 | AGCGCGCGCACAGCA CCGCGCCGCGTCAGC TCG GCGGACGCGGAGCAG CTCCTCGGCTCCGTC CMM_1487 1686082 - 1689102 + | putative ribonuclease CMM_1488 1689469 - 1689191 - | hypothetical protein rplU 1689759 - 1690067 + | 50S ribosomal protein L21 rpmA 1690092 - 1690346 + | 50S ribosomal protein L27 TERM 358 1690398 - 1690417 + F 81 -16.4 -3.551 | CGCGCAGCACTTCAA GGGCGGGC CTCG GCCCGCCC TTGTCTGCGTTCCGC obgE 1690466 - 1692004 + | GTPase ObgE proB 1692008 - 1692787 + | gamma-glutamyl kinase proA 1692835 - 1694133 + | hypothetical protein CMM_1494 1694234 - 1694449 + | hypothetical protein nadD 1694467 - 1695069 + | nicotinic acid mononucleotide adenylyltransferase CMM_1496 1695066 - 1696592 + | hypothetical protein CMM_1497 1696632 - 1697009 + | hypothetical protein CMM_1498 1697041 - 1697457 + | hypothetical protein TERM 359 1697639 - 1697668 + T 87 -20.7 -3.07962 | CAGATCCACCCTCGA GCCCCGCTCCTCC TCAC GGAGGCGCGGGGC TCTTCCCGTCTCGCC CMM_1499 1698695 - 1697691 - | hypothetical protein TERM 360 1698138 - 1698177 + g 81 -14.2 -3.82824 | gap 1, overlap 1698141 CGACGCGTGCACGGA GGAC-GGGCGGACGCCGTC GAA GACGACGCCCGCCCAGTGC TTGTTCTCGATGATG CMM_1500 1698747 - 1699070 + | hypothetical protein CMM_1501 1699112 - 1700116 + | putative esterase CMM_1502 1700253 - 1701041 + | DeoR family transcriptional regulator fruK 1701038 - 1702009 + | putative 1-phosphofructokinase TERM 361 1702702 - 1702746 + G 95 -24.3 -3.04144 | AGGGATCCTCCTCGG TCACGCCCGTCGACCCCGCGA TCA TCGCGCGGGCGACGGCCGTGA TCTTCGCGGTGGACG fruA 1702032 - 1704089 + | phosphoenolpyruvate-dependent fructose phosphotransferase system, EIIA, EIIB, EIIC fruB 1704145 - 1704417 + | phosphotransferase system, phosphocarrier protein HPr TERM 362 1704430 - 1704469 + T 100 -30.2 -2.62184 | gap 1, opp_overlap 1704435, overlap 1704435 TAGCCGACCCCACGA CGAGAGGCCCGGACACCGC GAT GCGG-GTCCGGGCCTCTCG TGGTGTCAGGCGACG TERM 363 1704464 - 1704435 - T 90 -21.5 -2.82834 | gap 1, opp_overlap 1704435 1704430 GACCCCACGACGAGA GGCCCGGACACCGC GAT GCGG-GTCCGGGCC TCTCGTGGTGTCAGG TERM 364 1704435 - 1704464 + T 90 -21.5 -2.84634 | gap 1, opp_overlap 1704435, overlap 1704430 GACCCCACGACGAGA GGCCCGGACACCGC GAT GCGG-GTCCGGGCC TCTCGTGGTGTCAGG CMM_1506 1706039 - 1704492 - | putative short-chain dehydrogenase/oxidoreductase CMM_1506A 1706396 - 1706121 - | hypothetical protein CMM_1507 1706484 - 1709024 + | putative ATP-dependent helicase TERM 365 1709758 - 1709809 + G 71 -7.1 -4.14739 | opp_overlap 1709752, overlap 1709759 GGGCAAGGACGCCGG CGCGTGGCCGGTCGCGCACG-CCGC GGCC GCGGACG-GCGTCACGGGCGGCGCC TTTTGGGGTCCCTGC CMM_1508 1709021 - 1709950 + | putative short chain dehydrogenase/oxidoreductase hisC1 1711084 - 1709966 - | histidinol-phosphate aminotransferase CMM_1510 1711169 - 1712074 + | putative hydrolase CMM_1511 1712142 - 1712876 + | putative hydrolase/acyltransferase CMM_1512 1712908 - 1714353 + | putative efflux MFS permease CMM_1513 1715327 - 1714350 - | putative Zn-dependant oxidoreductase CMM_1514 1715482 - 1716048 + | hypothetical protein CMM_1515 1717144 - 1716185 - | putative hydrolase/acyltransferase CMM_1516 1718240 - 1717308 - | putative hydrolase/acyltransferase CMM_1517 1719283 - 1718237 - | hypothetical protein dnaE1 1722777 - 1719355 - | DNA polymerase III, alpha chain TERM 366 1719912 - 1719870 - G 71 -14.8 -3.13403 | overlap 1719868 GGTCGTCGACGAAGA GCG-GCAGCTGCCCGGCCGG ATCCG CGGGCCGGGCCGC-GCGCGC CGTGAGCCGCCGCAC zwfA1 1722892 - 1724259 + | glucose-6-phosphate 1-dehydrogenase CMM_1520 1724367 - 1725110 + | putative carboxymethylenebutenolidase CMM_1521 1725174 - 1726481 + | LytR family transcriptional regulator CMM_1522 1727436 - 1726516 - | LysR family transcriptional regulator CMM_1523 1727505 - 1728032 + | putative acetyltransferase CMM_1524 1728749 - 1728051 - | nicotinamide mononucleotide transporter CMM_1525 1729209 - 1728886 - | hypothetical protein CMM_1526 1729463 - 1730332 + | putative oxidoreductase TERM 367 1730352 - 1730377 + T 87 -19.7 -3.21416 | opp_overlap 1730352 CCGCACGACGACGAA GGGCCCCGCGG CGGA TCGCGGGGCCC TTCGTCGTGCCGGTC TERM 368 1730377 - 1730352 - T 86 -19 -3.23216 | opp_overlap 1730352 CCGCACGACGACGAA GGGCCCCGCG GCGGAT CGCGGGGCCC TTCGTCGTGCCGGTC CMM_1527 1731542 - 1730403 - | hypothetical protein TERM 369 1731455 - 1731477 + g 71 -9.8 -3.9461 | overlap 1731458 CGGCCGGTGACTCGA GGAGCGTGCG GGT CGCGTGCTTC TTCTTCTTCGAGGAG TERM 370 1731458 - 1731474 + g 74 -7.9 -4.09963 | overlap 1731455 CCGGTGACTCGAGGA GCGTGCG GGT CGCGTGC TTCTTCTTCTTCGAG CMM_1528 1732270 - 1731539 - | hypothetical protein proV 1732461 - 1733366 + | putative proline/glycine/betaine/choline ABC transporter, ATP-binding protein proW 1733363 - 1734064 + | putative proline/glycine/betaine/choline ABC transporter, permease component proZ 1734061 - 1734786 + | putative proline/glycine/betaine/choline ABC transporter, permease component proX 1734800 - 1735729 + | putative proline/glycine/betaine/choline ABC transporter, substrate-binding protein CMM_1533 1735828 - 1736322 + | hypothetical protein chsA 1736319 - 1737539 + | putative chalcone synthase/polyketide synthase III CMM_1535 1737539 - 1738261 + | hypothetical protein CMM_1536 1738258 - 1739448 + | putative monooxygenase CMM_1537 1740286 - 1739441 - | putative polyprenyltransferase CMM_1538 1740753 - 1740283 - | putative acetyltransferase CMM_1539 1740805 - 1741338 + | putative N-acetyltransferase CMM_1540 1742075 - 1741632 - | hypothetical protein cydA 1742453 - 1743865 + | cytochrome bd-type menaquinol oxidase subunit I cydB 1743865 - 1744869 + | cytochrome bd-type menaquinol oxidase subunit II cydD 1744877 - 1746637 + | ABC transporter, ATP-binding protein involved in cytochrome bd biosynthesis cydC 1746634 - 1748301 + | transport ATP-binding protein CydC CMM_1545 1749150 - 1748332 - | hypothetical protein trpE2 1749204 - 1750667 + | putative anthranilate synthase component I TERM 371 1752850 - 1752820 - g 74 -16.8 -3.06671 | opp_overlap 1752816 AGATCGAGTGGAAGA CGGGCGACGAGGCG CTC CGCCGCGTCACCCA CCGCTTCCTCGCCGA leuS 1750767 - 1753322 + | leucyl-tRNA synthetase CMM_1548 1753719 - 1754390 + | putative protein involved in DNA uptake TERM 372 1754547 - 1754573 + G 73 -18 -2.62184 | GTGCGGCCGCGTCGT CTGCCGGCGTCG CCG CGACGCTGGCGG TGGTGTGCGCCGGAC CMM_1549 1754387 - 1756144 + | membrane protein, putatively involved in DNA uptake TERM 373 1756940 - 1756892 - g 73 -15.3 -3.25823 | gap 3 GCGGGTCGAGATCAA CGCCTTCGCGGTCGCGGACTCGGC GATC GCCG-G-CCGCGGCGGCG-AGGCG CTCGTCCTGCTCCGC holA 1756230 - 1757258 + | DNA polymerase III, delta subunit TERM 374 1757344 - 1757312 - T 100 -28.5 -2.62396 | opp_overlap 1757315 CACCTCCGGACATGA CGACGGGCCCCGCGC GAT GCGCGGAGCCCGTCG TTCACACCAGGGGAG TERM 375 1757315 - 1757341 + T 90 -20.8 -2.70932 | opp_overlap 1757312 CTCCGGACATGACGA CGGGCCCCGCGC GAT GCGCGGAGCCCG TCGTTCACACCAGGG rpsT 1757624 - 1757361 - | 30S ribosomal protein S20 CMM_1552 1758278 - 1757760 - | putative NUDIX hydrolase TERM 376 1758940 - 1758890 - g 73 -15.5 -3.28712 | overlap 1758874 1758891 1758917 CGCTCTCGGCGAGAA CCCGAAGCGCGTCTACGGCGC-CAA GGA CCGCACGCCGTCGACGCGCCT-GGG CGTGGCCATGGTGAT CMM_1553 1758372 - 1759631 + | putative amidohydrolase TERM 377 1759951 - 1759905 - g 76 -18.8 -2.62184 | gap 3 CGCGCGTGGAGACGA CGGC-CGAGCTCGCGCGC-GCCG TCGC CGACAGCGCGCG-GCCCGTGCCG ATGTGGATCAACGCC CMM_1554 1759628 - 1760605 + | NDP sugar epimerase, putative cell-division inhibitor lepA 1760718 - 1762565 + | GTP-binding protein LepA CMM_1556 1763351 - 1762575 - | putative secreted protein CMM_1557 1764357 - 1763578 - | putative secreted protein TERM 378 1764650 - 1764621 - R 87 -20.7 -3.05844 | GCCTGGACGCGAAGA CGCGCCCCAGCCT CGAG AGGCAGGGGCGCG TCAGGACGCTGCAGG CMM_1558 1765447 - 1764671 - | putative secreted protein CMM_1559 1765744 - 1766397 + | hypothetical protein CMM_1560 1767121 - 1766420 - | putative phosphatase hemN 1767201 - 1768424 + | coproporphyrinogen III oxidase CMM_1562 1768853 - 1768440 - | hypothetical protein CMM_1563 1769259 - 1768864 - | hypothetical protein hrcA 1769447 - 1770469 + | heat-inducible transcription repressor dnaJ2 1770530 - 1771645 + | chaperone CMM_1566 1771648 - 1772406 + | hypothetical protein CMM_1567 1772435 - 1772791 + | HIT family hydrolase CMM_1568 1772778 - 1773827 + | putative phosphate starvation-induced ATPase CMM_1569 1773824 - 1774285 + | putative metalloprotease CMM_1570 1774294 - 1775616 + | hypothetical protein TERM 379 1775675 - 1775649 - g 74 -17.2 -2.78384 | CGCCCGTCGAGGAGA CGGCGGCGGACG GGT CGCCCGTCGCCG GGACGGCCGCCGAGC TERM 380 1775773 - 1775791 + G 72 -13.8 -3.33361 | GCCGCGCGGGGGAGC GCCCGCGT ACC GCGCGGGC TTCGTCTCCTTCGTC era 1775609 - 1776661 + | GTP-binding protein Era CMM_1572 1776773 - 1778284 + | putative two-component system, sensor kinase TERM 381 1778632 - 1778664 + G 89 -20.5 -3.21099 | opp_overlap 1778630, overlap 1778645 GACCTCGACGAGAGC GCCGCTCGCGCCATC CGG GCCGGCGCGAGCGGC TTCGTGCTGAAGGAC CMM_1573 1778338 - 1779024 + | putative two-component system, response regulator CMM_1574 1779110 - 1780513 + | putative membrane bound esterase CMM_1575 1780510 - 1783086 + | hypothetical protein leuA 1783252 - 1785018 + | 2-isopropylmalate synthase CMM_1577 1785787 - 1785110 - | hypothetical protein recO 1785906 - 1786835 + | DNA repair protein /recombination protein uppS1 1786832 - 1787698 + | putative undecaprenyl pyrophosphate synthetase CMM_1580 1787708 - 1788817 + | putative oxidoreductase glyS 1788928 - 1790313 + | glycyl-tRNA synthetase CMM_1582 1790829 - 1790365 - | hypothetical protein TERM 382 1791331 - 1791285 - g 77 -16.4 -3.29471 | GCTGCAGCACACCAA CACGGTGCTCGCGCACGAGCTG CTG CACCTCGCGCGCGTGCGCGGCG TCCAGCTCGAGATGG CMM_1583 1790950 - 1791675 + | hypothetical protein dusA 1791958 - 1793190 + | putative tRNA-dihydrouridine synthase dgtA 1793195 - 1794454 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein dnaG 1794549 - 1796438 + | DNA primase TERM 383 1798012 - 1797970 - g 70 -17 -2.70932 | overlap 1797955 GGCCCGCGTCAACGA CGAGTACCCGGCGTACCAGC TCG GCTGGTTCCCCGACTACTCG GACGCGGACAACTAC CMM_1587 1796639 - 1798294 + | putative oligopeptide ABC transporter, substrate-binding protein CMM_1588 1798439 - 1799533 + | putative oligopeptide ABC transporter, permease component TERM 384 1800339 - 1800366 + G 77 -19.2 -2.78384 | gap 1, overlap 1800329 GGCTACGACCTCAAC CGCGCGCTCGCGG ACA CCGCGAGCG-GCG TCTGGTGGACGGGCG CMM_1589 1799535 - 1800557 + | putative oligopeptide ABC transporter, permease component CMM_1590 1800554 - 1802266 + | putative oligopeptide ABC transporter, ATP-binding protein CMM_1591 1802380 - 1803327 + | putative oligopeptide ABC transporter, ATP-binding protein CMM_1592 1803438 - 1804343 + | putative 2-hydroxyacid dehydrogenase CMM_1593 1804431 - 1805438 + | hypothetical protein CMM_1594 1805826 - 1805458 - | hypothetical protein TERM 385 1805902 - 1805877 - R 100 -15.4 -4.54727 | opp_overlap 1805877 GCGCGCAAAGGAAAA GGCCCCGCGG GTGGAG CCGCGAGGCC TTCGCTCCCCGAGTT defA 1806623 - 1806057 - | putative polypeptide deformylase wcmE 1806663 - 1807574 + | exporter DMT family membrane protein wcmF 1807755 - 1809014 + | putative glycosyltransferase TERM 386 1809709 - 1809739 + G 71 -8.3 -3.99374 | gap 2, overlap 1809715 CCTCTCGGGCCGCGC CTCGGCGATCGCGTG GGA CA-GCG-TCGCCGCG TTCTTCTTCGTCGCC TERM 387 1810547 - 1810504 - g 82 -13.6 -3.9461 | overlap 1810505 GCGCCGGAAGAAGAA GCGCGCGCGCCGCCGTCCCG GGTT CGGGGCGTCGACGGGCACGA AGGTCGCGGCCCTCG TERM 388 1810546 - 1810505 - g 73 -17.1 -2.96444 | overlap 1810504 CGCCGGAAGAAGAAG CGCGCGCGCCGCCGTCCCG GGTT CGGGGCGTCGACGGGCACG AAGGTCGCGGCCCTC wcmG 1809356 - 1811548 + | putative membrane-bound acyltranferase fclA 1812652 - 1811648 - | hypothetical protein gmdA 1813701 - 1812649 - | putative GDP-mannose 4,6-dehydratase wcmH 1813877 - 1815163 + | putative glycosyltransferase wcmI 1815160 - 1815744 + | putative acetyltransferase involved in polysaccharide biosynthesis wcmJ 1815849 - 1816784 + | putative pyruvyltransferase wcmK 1816781 - 1818013 + | glycosyl transferase wzy1 1818010 - 1819293 + | putative colanic acid biosynthesis protein CMM_1606 1819193 - 1819942 + | glycosyl transferase wcmM 1819939 - 1820442 + | putative serine acetyltransferase wzx1 1820477 - 1821901 + | putative membrane protein involved in the export of EPS wcmN 1823482 - 1821917 - | putative undecaprenyl-phosphate glycosyl-1-phosphate transfe TERM 389 1823494 - 1823526 + r 75 -15.6 -3.05844 | TCATCGTCCCCCCAA GCCGATGGTGCGTC CCCCT GAGGCACCGTCGGC TCTTGGGATCGAGAC CMM_1610 1823915 - 1823628 - | hypothetical protein TERM 390 1823991 - 1823952 - R 91 -18.6 -3.60627 | opp_overlap 1823959, overlap 1823953 1823956 GGACGCCACGTTAAA TGGAGAACGGCCCCGACC ACGT GGTCGGAGCCGTTCTCGG AAGCTCAGCGTGCTG TERM 391 1823990 - 1823953 - R 90 -22.1 -2.76162 | opp_overlap 1823959, overlap 1823952 1823956 GACGCCACGTTAAAT GGAGAACGGCCCCGACC ACGT GGTCGGAGCCGTTCTCG GAAGCTCAGCGTGCT TERM 392 1823987 - 1823956 - R 89 -22.4 -2.65354 | opp_overlap 1823959, overlap 1823953 1823952 GCCACGTTAAATGGA GAACGGCCCCGACC ACGT GGTCGGAGCCGTTC TCGGAAGCTCAGCGT TERM 393 1823959 - 1823984 + r 79 -16.1 -3.29511 | opp_overlap 1823956 1823953 1823952 ACGTTAAATGGAGAA CGGCCCCGACC ACGT GGTCGGAGCCG TTCTCGGAAGCTCAG cspA1 1824236 - 1824033 - | putative cold shock protein TERM 394 1824294 - 1824257 - H 74 -4.7 -4.57341 | gap 1, opp_overlap 1824290, overlap 1824259 1824262 AATTTCCTTCAAAAA GAGATGCATCGATCCCGG GAC CCGGGACCG-CGGGTCGC CTGCCCCTCGTGACC polA2 1824495 - 1826165 + | putative DNA polymerase I CMM_1612A 1826256 - 1826405 + | hypothetical protein CMM_1613 1826513 - 1827364 + | hypothetical protein CMM_1614 1827968 - 1827366 - | PadR family transcriptional regulator CMM_1615 1828232 - 1828750 + | hypothetical protein TERM 395 1828826 - 1828803 - T 84 -19.6 -2.82516 | opp_overlap 1828803 CGCCTGACGACGAGA GGCCCCGACC ATCC GGTCGGGGCC TCTCGTCGTGGGTCC TERM 396 1828803 - 1828826 + T 84 -19.6 -2.83164 | opp_overlap 1828803 CGCCTGACGACGAGA GGCCCCGACC ATCC GGTCGGGGCC TCTCGTCGTGGGTCC fabF 1830085 - 1828844 - | 3-oxoacyl-[acyl-carrier-protein] synthase acpP 1830413 - 1830165 - | acyl carrier protein fabH 1831480 - 1830467 - | 3-oxoacyl-(acyl carrier protein) synthase III fabD 1832431 - 1831511 - | putative malonyl CoA-acyl carrier protein transacylase CMM_1620 1833800 - 1832526 - | putative transcriptional regulator aceE 1836543 - 1833817 - | pyruvate dehydrogenase subunit E1 ahpE 1836784 - 1837257 + | putative thiol-specific antioxidant protein CMM_1623 1837975 - 1837286 - | hypothetical protein CMM_1624 1838772 - 1838182 - | TetR family transcriptional regulator CMM_1625 1838853 - 1839494 + | membrane protein BioY family CMM_1626 1839509 - 1840195 + | putative metal ABC transporter, ATP-binding protein CMM_1627 1840192 - 1840803 + | putative metal ABC transporter, permease component CMM_1628 1840889 - 1841080 + | hypothetical protein CMM_1629 1841133 - 1841960 + | hypothetical protein TERM 397 1842579 - 1842552 - g 71 -14.8 -3.17212 | overlap 1842555 CGAGCAGGCCAGGAA GGACCGCGACGC GCTC GCGCCGCGGTTC CCCGAGGACCTGCTC CMM_1630 1842052 - 1842786 + | hypothetical protein TERM 398 1843257 - 1843229 - T 100 -26.1 -3.21218 | opp_overlap 1843229 ACCCCGCACGACGAA GCGGCCGGATCCC CTC GGGATCCGGCCGC TTCGTCGTGCGGCGC TERM 399 1843229 - 1843257 + T 100 -26.1 -3.21099 | opp_overlap 1843229 ACCCCGCACGACGAA GCGGCCGGATCCC CTC GGGATCCGGCCGC TTCGTCGTGCGGCGC ppgK1 1844102 - 1843281 - | putative polyphosphate glucokinase CMM_1632 1844177 - 1844359 + | hypothetical protein panB 1845238 - 1844369 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase glnA2 1845324 - 1846661 + | putative glutamine synthetase II glnE 1846720 - 1849740 + | putative glutamate-ammonia-ligase adenylyltransferase glnA1 1851258 - 1849834 - | glutamine synthetase I CMM_1637 1851451 - 1851879 + | hypothetical protein CMM_1638 1852630 - 1851905 - | putative chaperone CMM_1639 1853395 - 1852685 - | hypothetical protein pknD 1853609 - 1855297 + | putative serine/threonine protein kinase aceF 1856766 - 1855324 - | putative pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component lpdB 1858200 - 1856827 - | dihydrolipoamide dehydrogenase TERM 400 1858319 - 1858308 - R 72 -3.6 -4.57073 | overlap 1858309 1858310 TACGCGCGTGAAAAA CCCG CGGC CAGG GCCAGGAGCGTGCGG pepA 1859800 - 1858292 - | leucine aminopeptidase TERM 401 1858915 - 1858953 + g 70 -16.7 -2.68487 | gap 1, overlap 1858913 1858907 GCAGCTCGAGCCGTG CCGCCGCCACCACGA-CC TCGA GGATCGTGGCGGCGCCGG TCATGTCGTACTTCA CMM_1644 1859970 - 1860890 + | hypothetical protein CMM_1645 1860965 - 1862287 + | putative MFS permease TERM 402 1862740 - 1862713 - g 74 -16.2 -3.14881 | overlap 1862685 1862683 GAAGGCCCCCACCAA GGCCGCCGCCGC GAAG GCGGCGGCAGCT GAGGCAGCAGCAGCC sigA 1862537 - 1864015 + | RNA polymerase sigma factor murX 1864019 - 1865299 + | putative UDP-N-acetylmuramyl tripeptide synthase CMM_1648 1865296 - 1866030 + | putative glutamine amidotransferase TERM 403 1866057 - 1866112 + T 90 -22.6 -2.78816 | opp_overlap 1866068 1866072 TGTGGGCCGGCCGCA TCCGCACATGACGAAGGGCGCATCCC CACG GGGATGCGCCCTCCGTCGTCCGCCGA TGTGATCGGCGCTGG TERM 404 1866101 - 1866068 - T 95 -24.7 -2.62983 | opp_overlap 1866057, overlap 1866072 CGCATCCGCACATGA CGAAGGGCGCATCCC CACG GGGATGCGCCCTCCG TCGTCCGCCGATGTG TERM 405 1866097 - 1866072 - T 87 -20.5 -3.24747 | opp_overlap 1866057, overlap 1866068 TCCGCACATGACGAA GGGCGCATCCC CACG GGGATGCGCCC TCCGTCGTCCGCCGA CMM_1649 1866360 - 1866133 - | hypothetical protein CMM_1650 1866573 - 1868651 + | DNA topoisomerase IV subunit B CMM_1651 1871279 - 1868733 - | DNA topoisomerase IV subunit A TERM 406 1869197 - 1869147 - G 76 -11.9 -3.8512 | gap 3, overlap 1869149 1869152 GACGGAGGAGAAGAA CA-GCACGC-GCG-CGCCGGCGCC GAGGTT GACGCCGGCGACGCCGCCCGCCTG GATCCCCTGGGGTCG TERM 407 1869194 - 1869149 - G 74 -14.7 -3.50808 | gap 2, overlap 1869147 1869152 CGGAGGAGAAGAACA GCACGC-GCG-CGCCGGCGCC GAGGTT GACGCCGGCGACGCCGCCCGC CTGGATCCCCTGGGG CMM_1652 1871364 - 1872503 + | hypothetical protein CMM_1653 1873749 - 1872559 - | hypothetical protein CMM_1654 1874075 - 1874368 + | hypothetical protein TERM 408 1874418 - 1874451 + T 86 -19.7 -2.71731 | GCCTGACCGGACGTC ATGATCGCCGCGATC CCCG GATCGCGGCGATCAG TCGTTCCGGGGTGCG CMM_1655 1874865 - 1874416 - | hypothetical protein dutA 1874904 - 1875374 + | hypothetical protein CMM_1657 1875371 - 1876063 + | hypothetical protein CMM_1658 1876066 - 1876857 + | hypothetical protein acnA 1877093 - 1879906 + | aconitate hydratase TERM 409 1879918 - 1879945 + F 100 -24.2 -3.18264 | GTAACGGCGACCTGA GGAGGCCGGGCG GCGA CGCCCGGCCTCC TTCGTGCATGCAGGG dxsA 1879985 - 1881973 + | 1-deoxy-D-xylulose-5-phosphate synthase fadB 1884164 - 1882035 - | enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase fadA 1885369 - 1884161 - | putative 3-oxoacyl-CoA thiolase CMM_1663 1886931 - 1885441 - | putative ribonuclease D TERM 410 1885513 - 1885492 - G 73 -10.1 -3.91897 | gap 1 GCCGGCATCGACAAA GGCCGCCGCC ACC GG-AGCGGCC GTCGCCTCGACCTGC CMM_1664 1887524 - 1886928 - | hypothetical protein CMM_1665 1888365 - 1887619 - | putative pyrimidine reductase CMM_1666 1888802 - 1888362 - | hypothetical protein sseA 1889710 - 1888799 - | thiosulfate sulfurtransferase CMM_1668 1889879 - 1890943 + | putative ATPase amtB 1891196 - 1892482 + | ammonium transporter CMM_1670 1892731 - 1893570 + | oxidoreductase CMM_1671 1893777 - 1894208 + | hypothetical protein CMM_1672 1894205 - 1895071 + | putative methyltransferase xysA 1895220 - 1896515 + | endo-1,4-beta-xylanase A TERM 411 1896531 - 1896574 + F 91 -19.6 -3.33696 | gap 1, overlap 1896534 TCACCGCCCGAGCGA C-CACCGCGGCCCCCGTCCTC CTC GAGGATGGGGGCCGCTCTGCG TTCGTTGCCACACAC TERM 412 1896534 - 1896570 + F 85 -20.1 -2.60244 | overlap 1896531 CCGCCCGAGCGACCA CCGCGGCCCCCGTCCTC CTC GAGGATGGGGGCCGCTC TGCGTTCGTTGCCAC TERM 413 1898329 - 1898308 - g 70 -13.7 -3.18264 | CTGGGGAGTGAGCAA CGCGCGCAG CTGG CTGCGCACG TGGCCGATCGCGCGT xysB 1896686 - 1898695 + | endo-1,4-beta-xylanase A CMM_1675 1900137 - 1899661 - | hypothetical protein CMM_1676 1900245 - 1900733 + | hypothetical protein CMM_1677 1900871 - 1901752 + | hypothetical protein CMM_1678 1902281 - 1901811 - | putative mutT-like protein CMM_1679 1904365 - 1902278 - | hypothetical protein CMM_1680 1905184 - 1904405 - | short chain dehydrogenase TERM 414 1905293 - 1905321 + H 71 -16 -2.54193 | opp_overlap 1905276 1905293 CTGACGGCCAGGAGA GCCTATCGCCCG CCGTC CGGGCGGTGGGC TAGGTTCGGGTCATC CMM_1681 1905363 - 1905680 + | hypothetical protein glpQ2 1905677 - 1906465 + | putative glycerophosphoryl diester phosphodiesterase CMM_1683 1906526 - 1906891 + | hypothetical protein TERM 415 1906925 - 1906951 + T 88 -21.6 -2.64616 | opp_overlap 1906925 GAACCGTCTACAGGA GCACCCCTCGGC CTC GCCGGGGGGTGC TCCTCTGCGTGCGGG TERM 416 1906951 - 1906925 - T 82 -19.4 -2.62933 | opp_overlap 1906925 GAACCGTCTACAGGA GCACCCCTCGGC CTC GCCGGGGGGTGC TCCTCTGCGTGCGGG CMM_1684 1908520 - 1906979 - | putative apolipoprotein N-acyltransferase CMM_1685 1911033 - 1908562 - | putative helicase tatC 1911880 - 1911128 - | Sec-independent twin-arginine protein translocase tatA 1912279 - 1911935 - | sec-independent twin-arginine protein translocase protein CMM_1688 1913466 - 1912477 - | DeoR family transcriptional regulator CMM_1689 1914470 - 1913463 - | putative transcriptional regulator CMM_1690 1915562 - 1914519 - | putative peptidyl-prolyl cis-trans isomerase CMM_1691 1916688 - 1915624 - | putative methyltransferase CMM_1692 1917380 - 1916685 - | putative phosphatase CMM_1693 1917473 - 1918432 + | hypothetical protein cysS2 1919728 - 1918448 - | cysteinyl-tRNA synthetase bacA 1920551 - 1919733 - | undecaprenol kinase TERM 417 1920426 - 1920384 - G 72 -11.3 -3.61398 | gap 1 GCGCTTCCGGAAGAA CACCACGACCGCG-AGCTCG GTGC CGAGCTGCGTGATGGCGGTG AACGTGGCGCCCGGG CMM_1696 1921904 - 1920594 - | hypothetical protein TERM 418 1922148 - 1922109 - H 90 -20.8 -2.98823 | opp_overlap 1922112, overlap 1922112 1922114 CCCTTCGGACACACA CGAGAGCCGGTCGGATCC ATGA GGATCCGACCGGCTCTTC CTCGTTCCGGCCGCG TERM 419 1922112 - 1922145 + H 100 -26.9 -3.27298 | opp_overlap 1922109 1922112 1922114 TTCGGACACACACGA GAGCCGGTCGGATCC ATGA GGATCCGACCGGCTC TTCCTCGTTCCGGCC TERM 420 1922145 - 1922112 - H 95 -26.9 -2.72799 | opp_overlap 1922112, overlap 1922109 1922114 TTCGGACACACACGA GAGCCGGTCGGATCC ATGA GGATCCGACCGGCTC TTCCTCGTTCCGGCC TERM 421 1922143 - 1922114 - H 93 -23.7 -2.90797 | opp_overlap 1922112, overlap 1922112 1922109 CGGACACACACGAGA GCCGGTCGGATCC ATGA GGATCCGACCGGC TCTTCCTCGTTCCGG corA1 1922243 - 1923259 + | Mg2+/Co2+ transporter CMM_1698 1923304 - 1924269 + | putative nucleoside-diphosphate-sugar epimerase dnaJ3 1925618 - 1924278 - | curved DNA binding protein CMM_1700 1925869 - 1926510 + | glycine betaine/carnitine/choline ABC transporter, permease component CMM_1701 1926503 - 1927792 + | glycine betaine/carnitin ABC transporter ATP-binding protein CMM_1702 1927789 - 1928556 + | putative glycine/betaine/choline ABC transporter, permease CMM_1703 1928559 - 1929566 + | putative glycine/betaine ABC transporter,substrate-binding protein CMM_1704 1931617 - 1929809 - | putative DNA or RNA helicase CMM_1705 1933017 - 1931818 - | putative acyl-CoA dehydrogenase CMM_1706 1933920 - 1933069 - | hypothetical protein CMM_1707 1934046 - 1934837 + | putative esterase pbpX 1936067 - 1934853 - | D-alanyl-D-alanine carboxypeptidase CMM_1709 1936873 - 1936064 - | hypothetical protein CMM_1710 1937030 - 1937884 + | Sir2 family NAD-dependent protein deacetylase TERM 422 1938018 - 1937974 - g 73 -16.4 -2.94099 | CCGCTCGACGACACA GGCCGCGCGCAGGCGGC-CACC GCG GGTGCGCTGCTCGC-CGCGGCC GTCGCGGGTGGCGCG CMM_1711 1937881 - 1938516 + | phosphoglycerate mutase CMM_1712 1939664 - 1938570 - | glycosyl transferase family protein CMM_1713 1940557 - 1939661 - | putative hydrolase CMM_1714 1940695 - 1942416 + | putative trehalose synthase dnaQ 1942427 - 1943128 + | DNA polymerase III subunit epsilon TERM 423 1943182 - 1943157 - T 100 -23.3 -3.96148 | opp_overlap 1943157 GCCCTGGACGACAAA GGGCGCCCGGC CGAG GCCGGGCGCCC TTCGTGCTGCAGCGG TERM 424 1943157 - 1943182 + T 100 -23.3 -3.21099 | opp_overlap 1943157 GCCCTGGACGACAAA GGGCGCCCGGC CGAG GCCGGGCGCCC TTCGTGCTGCAGCGG rpmE 1943462 - 1943205 - | 50S ribosomal protein L31 modF 1944388 - 1943594 - | putative molybdate ABC transporter ATP-binding subunit CMM_1718 1945654 - 1944470 - | putative glycosyl transferase glgC 1945701 - 1946942 + | glucose-1-phosphate adenylyltransferase serB2 1946939 - 1947637 + | hypothetical protein CMM_1721 1948614 - 1947658 - | putative proteinkinase or phosphotransferase CMM_1722 1949348 - 1948638 - | putative 3-oxoacyl-[acyl-carrier protein] reductase CMM_1723 1949468 - 1949923 + | hypothetical protein CMM_1724 1949920 - 1950177 + | hypothetical protein TERM 425 1950422 - 1950392 - g 72 -14 -3.39327 | CGTCGACACGCAGAA GTGGACCCCGGTCA CCA TGACCGGGACCTAC CTGGTGGACGAGCAG CMM_1725 1950174 - 1951019 + | hypothetical protein CMM_1726 1952623 - 1951025 - | putative ABC transporter ATP-binding protein CMM_1727 1953183 - 1952848 - | hypothetical protein CMM_1728 1953950 - 1953180 - | putative ABC transporter, ATP-binding protein CMM_1729 1954284 - 1953964 - | putative 2Fe-2S ferredoxin CMM_1730 1955504 - 1954281 - | hypothetical protein CMM_1731 1956923 - 1955505 - | hypothetical protein TERM 426 1957529 - 1957554 + G 77 -16.1 -3.18945 | overlap 1957528 1957526 ACGTTCCTCGCCGTG CTGCGGCTGCG GACC CGCGGCCGCGG TCTCTTCTCCATCGC ctaA 1957190 - 1958200 + | membrane protein, putative cytochrome oxidase assembly protein ctaB 1959340 - 1958420 - | putative protoheme IX farnesyltransferase tktA 1959514 - 1961604 + | transketolase TERM 427 1961651 - 1961607 - f 100 -21.3 -3.28712 | CGCCTCCCTCTAGAA GCTGACGAGGAGCGGGGCGGC CGA GCTGCTCCGCTCCCCGCCGGC CCGCCCCGATCGACC talA 1961759 - 1962874 + | transaldolase pgiA 1962871 - 1964466 + | hypothetical protein zwfA2 1964505 - 1966046 + | glucose-6-phosphate 1-dehydrogenase opcA 1966043 - 1967041 + | putative glucose-6-P dehydrogenase effector pglA 1967038 - 1967808 + | putative 6-phosphogluconolactonase TERM 428 1967868 - 1967843 - T 75 -17.5 -2.64616 | CGGCGATCGACACGA CGGGCGGGTCC TCCG GGGCCCGCCCG TCGTCGTCCCCGCGG CMM_1740 1968370 - 1968002 - | putative electron transport protein secG 1968633 - 1968382 - | preprotein translocase subunit SecG tpiA 1969574 - 1968777 - | hypothetical protein pgk 1970785 - 1969571 - | phosphoglycerate kinase gapA 1971799 - 1970792 - | glyceraldehyde 3-phosphate dehydrogenase sodA 1972553 - 1971927 - | hypothetical protein whiA 1973702 - 1972722 - | hypothetical protein CMM_1747 1974607 - 1973732 - | hypothetical protein TERM 429 1974431 - 1974392 - G 73 -15 -3.30124 | gap 1, opp_overlap 1974396, overlap 1974395 GCGCAGCTCGGAGAA GAAG-TCGCCGCCGCGGAC GTC GACCACGGCCGCGATCTTC GGCAGCGACGTGCCT TERM 430 1974427 - 1974395 - G 71 -11.1 -3.7941 | opp_overlap 1974396, overlap 1974392 CAGCTCGGAGAAGAA GTCGCCGCCGCGGAC GTC GACCACGGCCGCGAT CTTCGGCAGCGACGT uvrC 1976611 - 1974683 - | excinuclease ABC subunit C uvrA 1979532 - 1976611 - | excinuclease ABC subunit A uvrB 1981681 - 1979615 - | excinuclease ABC subunit B coaE 1982305 - 1981691 - | hypothetical protein rpsA 1983846 - 1982392 - | 30S ribosomal protein S1 TERM 431 1983703 - 1983748 + g 73 -15.5 -3.20633 | gap 1, overlap 1983680 1983738 GACCTCGTCCCGATC GATCTTC-ACGACGGTGCCCTC GAT GAGGTCTCCGTCGTTGAAGAAC TTCAGTGTCTTCTCG CMM_1753 1985712 - 1984033 - | hypothetical protein CMM_1754 1986167 - 1985709 - | PTS system, fructose-specific IIA/fpr component polA1 1988894 - 1986210 - | DNA polymerase I TERM 432 1988506 - 1988539 + g 72 -16.1 -2.79302 | gap 1, opp_overlap 1988489, overlap 1988525 1988528 AGCACGCGGAAGCCC TGCTCGCGACCCTGCG TGG CG-AGGGTCGCGAGGA TGTCGTCCGCCTCGT CMM_1756 1988948 - 1989382 + | putative thioesterase TERM 433 1989387 - 1989428 + T 72 -12.1 -3.63515 | gap 1, opp_overlap 1989358 1989360 CGGGGCGCTGATCGC GGCGGCGCCGAT-CCGCGCG ACA TGCGCGGCGGCGGCTACGCC TTCTTGGCGCTCAGC CMM_1757 1990030 - 1989422 - | putative response regulator involved in antitermination pykA 1991739 - 1990294 - | hypothetical protein gltD 1993283 - 1991826 - | glutamate synthase subunit beta gltB 1997847 - 1993276 - | glutamate synthase (NADPH), alpha subunit CMM_1761 1998977 - 1997955 - | prolipoprotein diacylglyceryl transferase trpA 1999861 - 1999049 - | tryptophan synthase subunit alpha trpB 2001072 - 1999858 - | tryptophan synthase subunit beta trpC 2001845 - 2001069 - | indole-3-glycerol-phosphate synthase CMM_1765 2002087 - 2001845 - | hypothetical protein CMM_1766 2002830 - 2002192 - | hypothetical protein trpE1 2004389 - 2002830 - | anthranilate synthase component I hisI 2004784 - 2004386 - | phosphoribosyl-AMP cyclohydrolase hisF 2005572 - 2004781 - | imidazole glycerol phosphate synthase subunit HisF hisG 2006414 - 2005575 - | ATP phosphoribosyltransferase hisE 2006726 - 2006463 - | phosphoribosyl-ATP pyrophosphatase CMM_1772 2007194 - 2006826 - | FKBP-type peptidyl-prolyl cis-trans isomerase (PPIase) rpeA 2007897 - 2007229 - | ribulose-phosphate 3-epimerase CMM_1774 2009407 - 2007908 - | putative rRNA cytosine-C5-methylases fmtA 2010321 - 2009404 - | hypothetical protein priA 2012509 - 2010413 - | primosome assembly protein PriA metK 2013763 - 2012552 - | S-adenosylmethionine synthetase dfpA 2015020 - 2013803 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase rpoZ 2015368 - 2015099 - | DNA-directed RNA polymerase subunit omega gmkA 2016325 - 2015417 - | putative guanylate kinase putative guanylate kinase (GMP kinase)/integration host factor (IHF) fusion protein pyrF 2017215 - 2016322 - | putative orotidine 5'-phosphate decarboxylase carB 2020502 - 2017212 - | putative carbamoyl-phosphate synthase large subunit TERM 434 2019068 - 2019105 + g 78 -17.7 -3.14344 | GCAGCGTCTCCGCGT CGAGCTCGTCGGCGTCG CGCA CGGCGTCGGCGACCTCG TTGATGAGCACGATC carA 2021680 - 2020502 - | carbamoyl phosphate synthase small subunit CMM_1784 2022204 - 2021677 - | hypothetical protein pyrC 2023613 - 2022201 - | dihydroorotase pyrB 2024566 - 2023610 - | aspartate carbamoyltransferase catalytic subunit pyrR 2025147 - 2024563 - | pyrimidine regulatory protein PyrR acsA2 2027296 - 2025260 - | acyl-coenzyme A synthetase CMM_1789 2028234 - 2027371 - | putative anion ABC transporter, permease component CMM_1790 2029283 - 2028231 - | putative anion ABC transporter, substrate-binding protein CMM_1791 2030225 - 2029356 - | putative anion ABC transporter, ATP-binding protein nusB 2030746 - 2030333 - | putative antitermination protein efpA 2031313 - 2030750 - | elongation factor P aroQ 2031865 - 2031425 - | 3-dehydroquinate dehydratase CMM_1795 2032683 - 2031898 - | putative short-chain dehydrogenase/reductase aroB 2033813 - 2032680 - | 3-dehydroquinate synthase aroK 2034301 - 2033810 - | hypothetical protein aroC 2035542 - 2034304 - | chorismate synthase aroE 2036521 - 2035631 - | hypothetical protein CMM_1800 2037659 - 2036514 - | hypothetical protein CMM_1801 2038509 - 2038024 - | putative Hollyday junction resolvase alaS 2041166 - 2038509 - | alanyl-tRNA synthetase TERM 435 2039894 - 2039919 + g 70 -12.5 -3.4072 | overlap 2039895 GCATCAGGCGGTCGA AGGCCTCGCGG TCGA CCGTGAGGCCG TTCTCCTCGGCCATC TERM 436 2039895 - 2039918 + g 70 -16 -2.64218 | overlap 2039894 CATCAGGCGGTCGAA GGCCTCGCGG TCGA CCGTGAGGCC GTTCTCCTCGGCCAT CMM_1803 2041393 - 2041172 - | hypothetical protein TERM 437 2041559 - 2041519 - R 100 -33.4 -2.62184 | opp_overlap 2041550 CGCGGCCGGATACGA CGCGAGGCGGGCCGCCCC GGGAT GGGGCGACCCGCCTCGCG GACGGTGGAGCGGTG rpsD 2042205 - 2041576 - | 30S ribosomal protein S4 TERM 438 2042189 - 2042206 + g 71 -3.3 -4.4078 | GTCTTGCTGCGGGTG CGTGACT TGGT GGACACG TTTTCCTTCCAGGGA CMM_1805 2043875 - 2042454 - | recombination factor protein RarA CMM_1807 2044467 - 2045699 + | putative ATPase CMM_1808 2045793 - 2046401 + | hypothetical protein relA 2048637 - 2046388 - | GTP pyrophosphokinase CMM_1810 2049135 - 2048776 - | hypothetical protein secF 2050142 - 2049132 - | preprotein translocase subunit SecF secD 2051950 - 2050142 - | preprotein translocase subunit SecD CMM_1813 2052460 - 2052077 - | hypothetical protein ruvB 2053616 - 2052537 - | Holliday junction DNA helicase B ruvA 2054257 - 2053613 - | Holliday junction DNA helicase subunit ruvC 2054882 - 2054274 - | Holliday junction resolvase CMM_1817 2055701 - 2054934 - | hypothetical protein TERM 439 2055353 - 2055378 + g 76 -10.4 -4.03888 | gap 1 CGTTGCGGCTCATGG CCGTGCGGACC TCGGC GG-CCGCGCGG TTCTTGTTGTCGGTG CMM_1818 2056408 - 2055779 - | glutamine amidotransferase subunit PdxT CMM_1819 2057300 - 2056398 - | pyridoxine biosynthesis protein CMM_1820 2057856 - 2057314 - | hypothetical protein thrS 2059955 - 2057901 - | threonyl-tRNA synthetase TERM 440 2060090 - 2060059 - R 100 -20.2 -4.07568 | opp_overlap 2060065, overlap 2060060 2060062 GGGGGCCCGGGAAAA GCAGAAGGCCCCGG TCTC CCGGGGCCTTCTGG TGGTGAGCGATACTG TERM 441 2060089 - 2060060 - R 100 -23.7 -3.04398 | opp_overlap 2060065, overlap 2060059 2060062 GGGGCCCGGGAAAAG CAGAAGGCCCCGG TCTC CCGGGGCCTTCTG GTGGTGAGCGATACT TERM 442 2060087 - 2060062 - R 87 -20.5 -3.08032 | opp_overlap 2060065, overlap 2060060 2060059 GGCCCGGGAAAAGCA GAAGGCCCCGG TCTC CCGGGGCCTTC TGGTGGTGAGCGATA TERM 443 2060065 - 2060084 + r 81 -16.4 -3.44051 | opp_overlap 2060062 2060060 2060059 CCGGGAAAAGCAGAA GGCCCCGG TCTC CCGGGGCC TTCTGGTGGTGAGCG CMM_1822 2061730 - 2060771 - | Cro/CI family transcriptional regulator TERM 444 2062243 - 2062219 - g 70 -12.8 -3.35996 | overlap 2062234 CATGCTGACGCACAA GCAGCGCTCC ACCAA GGAGCGCGGC GCCCTCCTCATCAGC glpD 2061839 - 2063599 + | putative glycerol-3-phosphate dehydrogenase TERM 445 2063634 - 2063659 + F 86 -19.7 -2.82516 | opp_overlap 2063599 GATCCGCATCCGGGA GGCCGGTCGCC GAGA GGCGGCCGGCC TCTCGTCGTGCCGGG CMM_1824 2063716 - 2064207 + | putative peroxidase CMM_1825 2064768 - 2064253 - | hypothetical protein CMM_1826 2064860 - 2065276 + | hypothetical protein CMM_1827 2066044 - 2065310 - | putative PTS system hybrid protein CMM_1828 2066694 - 2066041 - | putative dihydroxyacetone kinase CMM_1829 2067699 - 2066698 - | putative dihydroxyacetone kinase glpF 2067981 - 2068733 + | MIP family glycerol uptake facilitator protein TERM 446 2069117 - 2069095 - g 70 -17 -2.5474 | overlap 2069094 2069092 CCGCACGCAGAAGAT CGTCGACCGC CTG GCGGCCGACG GCGGCGTGGAGCGCT glpK 2068763 - 2070280 + | putative glycerol kinase CMM_1832 2071101 - 2070370 - | hypothetical protein trpD 2072218 - 2071163 - | anthranilate phosphoribosyltransferase ctaE 2072307 - 2072936 + | putative cytochrome c oxidase subunit III qcrC 2072963 - 2073763 + | putative ubiquinol-cytochrome c reductase cytochrome c subunit qcrA 2073809 - 2074918 + | putative menaquinol-cytochrome C reductase iron-sulfur subunit qcrB 2074902 - 2076533 + | putative menaquinol-cytochrome c reductase cytochrome B subunit TERM 447 2076574 - 2076600 + F 90 -20.8 -2.80816 | GGGCACGCATCGAGA GCCGGACCGGCG TCA CGCCGGGCCGGC TCTCGTGCGTCCGGC CMM_1838 2076648 - 2077565 + | putative rRNA methylase involved in antibiotic resistance TERM 448 2078540 - 2078581 + T 72 -11.6 -3.65046 | gap 2 CTGCCCGGCTACCAG GTCGCCGGCGCATGCGTCCC CAGC GGGGCG-GTGAG-CGGCGAC TTCTTCGACTGGCAG TERM 449 2079375 - 2079349 - T 91 -19.5 -3.32844 | GCCCGGACGCGAGAA TGCCCGGCCTC TCGAG GAGGCCGGGCA TCGCGACGATCGGAG CMM_1839 2079833 - 2079396 - | putative acetyltransferase CMM_1840 2080254 - 2079838 - | hypothetical protein TERM 450 2080142 - 2080108 - G 73 -15.7 -3.20367 | gap 1, overlap 2080099 GAAGAAGCCGATGAA CGC-GGCCAGCGCGCC CGAG AGCGCGATGGCCAGCG TGCCGACCCATTCGA ctaD 2082001 - 2080256 - | putative cytochrome c oxidase subunit I ctaC 2082925 - 2082014 - | putative cytochrome c oxidase subunit II TERM 451 2083008 - 2082969 - R 75 -17.2 -2.62263 | gap 1, opp_overlap 2083003 ACGGGTCCCACACTA CGCGA-CAGGGAGCCGCCC GAA GGACGACTCCCTGCTCGGG CCCCGTGTTTCCGGG CMM_1843 2083412 - 2083050 - | hypothetical protein CMM_1844 2084961 - 2083540 - | hypothetical protein TERM 452 2085202 - 2085184 - g 85 -17.4 -3.51825 | GCAGGCCAAGGAGAA GGCGCGCG AGG CGCGCGCC CGGGCCAACGCGGGC CMM_1845 2085002 - 2085595 + | hypothetical protein pyrD 2086660 - 2085626 - | dihydroorotate dehydrogenase 2 CMM_1847 2087197 - 2086724 - | transcriptional regulator NrdR hisD 2088519 - 2087215 - | histidinol dehydrogenase CMM_1849 2088581 - 2089096 + | putative flavin-dependent reductase/monooxygenase dnaE 2092640 - 2089128 - | DNA polymerase III subunit alpha CMM_1851 2093634 - 2092717 - | putative pseudouridine synthase TERM 453 2093749 - 2093695 - R 100 -27.4 -2.70932 | gap 3, opp_overlap 2093735 2093735 GGGCTGCGCGAACGA CGACGGCGACGCGGGACCCCGTCGCTC CTCG GAGC--C-GGGTCCCGCGCCGCCGTCG GGCGTGCGGGTGGTT CMM_1852 2094417 - 2093770 - | putative cell division initiation protein TERM 454 2094261 - 2094283 + g 70 -13.4 -3.44051 | CGGCGTCGCCCGAGC CGAGGCGCTG GCG CAGCTCCTCG TTCTCCTGGTGGAGG CMM_1853 2094869 - 2094564 - | hypothetical protein TERM 455 2094915 - 2094872 - R 85 -16.6 -3.52896 | overlap 2094875 TGATCACGGACACAA GTATGGCGGGCGCCGATGGG AGGT CCCGTCGTCGCCCGCCATGG CGGTGCTGGGTGGAT TERM 456 2094912 - 2094875 - R 90 -22.7 -2.89793 | overlap 2094872 TCACGGACACAAGTA TGGCGGGCGCCGATGGG AGGT CCCGTCGTCGCCCGCCA TGGCGGTGCTGGGTG CMM_1854 2095424 - 2094930 - | hypothetical protein CMM_1855 2096204 - 2095473 - | hypothetical protein ftsZ 2097340 - 2096201 - | cell division protein FtsZ TERM 457 2096343 - 2096372 + g 70 -13.5 -3.33261 | gap 1, opp_overlap 2096360 GCGGCGACCGCTCCC CCGCCCGCGGCGAC GAA GCCGCTGCGG-CGG TTCTCGACCTTGGAG ftsQ 2098176 - 2097478 - | cell division protein FtsQ murC 2100140 - 2098710 - | putative UDP-N-acetylmuramate--alanine ligase murG 2101286 - 2100183 - | N-acetylglucosaminyl transferase ftsW2 2102572 - 2101283 - | putative cell division membrane protein murD 2104073 - 2102529 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase mraY 2105185 - 2104076 - | phospho-N-acetylmuramoyl-pentapeptide-transferase murF 2106588 - 2105179 - | putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase murE 2108134 - 2106590 - | putative UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase ftsI 2109928 - 2108147 - | putative peptidoglycan glycosyltransferase/penicillin-binding protein CMM_1866 2110694 - 2110020 - | hypothetical protein mraW 2111647 - 2110691 - | putative S-adenosyl-methyltransferase mraZ 2112182 - 2111751 - | cell division protein MraZ TERM 458 2112411 - 2112374 - R 83 -16.9 -3.35679 | CGCGGGCACGCAGAA GCGCCCCACGGGCGGTC CGAG GACGGCCGGCGGAGCGC TGGGGAGGGATGTGG TERM 459 2112479 - 2112445 - R 100 -25.9 -3.50393 | overlap 2112448 GCGGAGGGGACAGAA GAAGGGGCCGATCCC TGTTC GGGATCGGCCCCTTC GGGTCGAGTGGAGGG TERM 460 2112476 - 2112448 - R 100 -21.8 -3.88946 | overlap 2112445 GAGGGGACAGAAGAA GGGGCCGATCCC TGTTC GGGATCGGCCCC TTCGGGTCGAGTGGA CMM_1869 2112916 - 2112521 - | hypothetical protein CMM_1870 2112994 - 2114115 + | putative geranylgeranyl pyrophosphate synthase CMM_1871 2114508 - 2114167 - | putative transcriptional regulator CMM_1872 2114721 - 2115992 + | hypothetical protein pknE 2116075 - 2118024 + | putative serine/threonine protein kinase aroG 2119463 - 2118093 - | putative phospho-2-dehydro-3-deoxyheptonate aldolase TERM 461 2118350 - 2118312 - G 75 -13 -3.61398 | opp_overlap 2118312 2118313, overlap 2118313 GTGCGCCTGGAAGAA GCCCTGCACCTCGTCGAC GAC GTCGTCGAAGCGCCGGGT CTTGTAGCCGGTCGG TERM 462 2118349 - 2118313 - G 70 -16.5 -2.76696 | opp_overlap 2118313 2118312, overlap 2118312 TGCGCCTGGAAGAAG CCCTGCACCTCGTCGAC GAC GTCGTCGAAGCGCCGGG TCTTGTAGCCGGTCG CMM_1875 2120212 - 2119523 - | putative acyltransferase glkA 2121256 - 2120291 - | putative glucokinase, putative catabolite repressor TERM 463 2120862 - 2120824 - G 87 -20.3 -3.08798 | gap 1 AGCCGCCACGGAAGA GC-CGGTCGTCGGCGACG ATCG CGCCGCCGACGCCCGTGC CGATCGTGAGGGTGA CMM_1877 2121390 - 2123216 + | putative long-chain-fatty-acid-CoA ligase TERM 464 2123255 - 2123219 - T 95 -20.2 -3.64703 | gap 1, overlap 2123220 2123222 GCTGGTCCACTGAAA GGAG-CGACGGCCCGCG CACG CGCGGGCCGTCGGCTCA GAACCAGTCGGACTC TERM 465 2123254 - 2123220 - T 93 -23.7 -2.78679 | gap 1, overlap 2123219 2123222 CTGGTCCACTGAAAG GAG-CGACGGCCCGCG CACG CGCGGGCCGTCGGCTC AGAACCAGTCGGACT TERM 466 2123251 - 2123222 - T 86 -20.7 -2.94144 | overlap 2123220 2123219 GGTCCACTGAAAGGA GCGACGGCCCGCG CACG CGCGGGCCGTCGG CTCAGAACCAGTCGG defB 2123744 - 2123253 - | putative polypeptide deformylase CMM_1879 2125251 - 2123779 - | putative oxidoreductase ( E3 component of 2-oxoglutarate dehydrogenase complex) pycA 2128668 - 2125267 - | pyruvate carboxylase CMM_1881 2128748 - 2129560 + | putative ATPase TERM 467 2129574 - 2129606 + T 95 -26.4 -2.62263 | GATCCGCTCGCTCCC CGGACGCCGCCCCT GCTCG AGGGGCGGCGTCCG TCGTCTGAGGCGCAT CMM_1882 2130296 - 2129754 - | MerR family transcriptional regulator CMM_1883 2131539 - 2130838 - | MerR family transcriptional regulator CMM_1884 2132021 - 2131539 - | transcriptional regulator dctA 2133495 - 2132110 - | Na+/H+-dicarboxylate symporter dctS 2133637 - 2135391 + | putative two-component system sensor kinase dctR 2135388 - 2136092 + | putative two-component system response regulator CMM_1888 2136186 - 2137232 + | zinc metalloprotease family M4 CMM_1889 2137233 - 2137514 + | hypothetical protein CMM_1890 2137511 - 2138371 + | hypothetical protein CMM_1891 2139469 - 2138396 - | hypothetical protein TERM 468 2139596 - 2139580 - H 72 -12.3 -3.68529 | ACCGCACCATCGAAA CGATGCG ATC CGCATCG CTCCCCCAGCAGAAG CMM_1892 2139624 - 2140790 + | putative polyamine ABC transporter, substrate binding protein CMM_1893 2140787 - 2141740 + | putative polyamine ABC transporter, permease component CMM_1894 2141740 - 2142555 + | putative polyamine ABC transporter, permease component CMM_1895 2142563 - 2143714 + | putative polyamine ABC transporter, ATPase component CMM_1896 2143711 - 2145303 + | bifunctional glycerophosphoryl diester phosphodiesterase/inositol monophosphatase CMM_1897 2146256 - 2145300 - | NTP pyrophosphohydrolase CMM_1898 2146297 - 2146776 + | hypothetical protein CMM_1899 2147833 - 2146817 - | putative Zinc-dependant dehydrogenase CMM_1900 2147962 - 2148690 + | hypothetical protein CMM_1901 2148722 - 2149471 + | hypothetical protein CMM_1902 2150961 - 2149468 - | hypothetical protein CMM_1903 2151005 - 2151433 + | putative heat shock protein CMM_1904 2152398 - 2151430 - | hypothetical protein CMM_1905 2152491 - 2152925 + | hypothetical protein CMM_1906 2153147 - 2154175 + | hypothetical protein CMM_1907 2154219 - 2154473 + | hypothetical protein CMM_1908 2155541 - 2154561 - | putative chaperone cpsY 2157205 - 2155538 - | putative UDP-glucose-4-epimerase TERM 469 2156779 - 2156832 + g 71 -15.2 -3.05844 | gap 2 CGGCGTCGGGGTTGT CCGTGAGGCGGCCGTCGGCGACGAGC AGCG GCGGG-CGGCGGCGGCCGTC-CACGG TCTTGGCGTACAGCG CMM_1910 2158114 - 2157386 - | hypothetical protein CMM_1911 2158290 - 2159201 + | hypothetical protein TERM 470 2161963 - 2161918 - g 84 -19 -3.29144 | CGAGGCGCCCTACAA CCCGGTCGCG-CCCGCGCTCGC CAAC GCG-GTGCGGGACGCGATCGGG ATCCGCCCGCACGAC CMM_1912 2159198 - 2162083 + | hypothetical protein CMM_1913 2163395 - 2162103 - | amino acid permease APC family CMM_1914 2164498 - 2163392 - | hypothetical protein TERM 471 2165281 - 2165240 - g 70 -16.5 -2.53715 | gap 1, overlap 2165239 TGCAGGAGCAGGAAC GCGCGGACGACGCCCGACAC GCG GAGT-GGGCGCCGCCCGCCC CCGACGACCGGATCC CMM_1915 2164684 - 2165313 + | hypothetical protein CMM_1916 2165363 - 2166028 + | hypothetical protein CMM_1917 2166240 - 2167694 + | putative guanine deaminase CMM_1918 2168488 - 2167709 - | putative membrane-associated acid phosphatase CMM_1919 2168853 - 2168485 - | hypothetical protein CMM_1920 2168921 - 2169544 + | hypothetical protein CMM_1921 2170271 - 2169552 - | hypothetical protein CMM_1922 2170863 - 2170402 - | hypothetical protein ggtA 2172743 - 2170932 - | hypothetical protein TERM 472 2172609 - 2172591 - G 81 -17.4 -3.21416 | CACGTGCAGCACGAA CGCGGCGG CGA CCGCCGCG TCGAAGGCGTTGCCG CMM_1924 2172845 - 2174284 + | putative efflux MFS permease CMM_1925 2174382 - 2175410 + | putative monooxygenase/oxidoreductase CMM_1926 2175523 - 2176338 + | putative esterase CMM_1927 2176335 - 2177027 + | hypothetical protein CMM_1928 2177183 - 2177479 + | hypothetical protein TERM 473 2177552 - 2177515 - T 100 -27.1 -2.78384 | GCTGCGGCGAGCAGA CGGATGGCCGCATCGCC CGAG GGCGGTGCGGCCATCCG TCGTCCGGGGCCCGT CMM_1929 2178600 - 2177572 - | putative quinone oxidoreductase TERM 474 2178573 - 2178629 + g 87 -19.5 -3.14051 | overlap 2178573 2178619 GGACGTCGGGGGCAC CCGTGCGGGTGT-AGGCGATGGCTCTC ATGAC GAG-GCCAACGCCCGACGCCCGCGCGG TGTTCCTGCGGGTCA CMM_1930 2180207 - 2178642 - | hypothetical protein CMM_1931 2180872 - 2180204 - | hypothetical protein TERM 475 2180286 - 2180336 + g 88 -16.9 -3.8211 | gap 2, overlap 2180287 GCCGGGTTCGGGTAC TCCGC-GC-CGTGCTCGAGCTCGTG GAG CACGCGCTCGACCACGTGCGGCGGC TTGTTCTGGCTGAGC TERM 476 2180287 - 2180335 + g 83 -20.4 -2.88945 | gap 2, overlap 2180286 CCGGGTTCGGGTACT CCGC-GC-CGTGCTCGAGCTCGTG GAG CACGCGCTCGACCACGTGCGGCGG CTTGTTCTGGCTGAG CMM_1932 2182702 - 2180987 - | putative acyl-CoA synthetase CMM_1933 2182827 - 2183663 + | putative arylesterase CMM_1934 2184069 - 2183722 - | LysR family transcriptional regulator CMM_1935 2184187 - 2184807 + | putative mutT-like hydrolase CMM_1936 2184987 - 2185898 + | putative lipase CMM_1937 2186146 - 2187582 + | hypothetical protein CMM_1938 2187675 - 2188910 + | peptidase family M20D CMM_1939 2189210 - 2188914 - | IS481 family transposase CMM_1940 2189917 - 2189210 - | IS481 family transposase TERM 477 2190087 - 2190132 + r 82 -15.3 -3.58726 | opp_overlap 2190090, overlap 2190088 2190090 CCGAGCATGGGTGCA ACAGCGAGAGCTGCGGCCCAC CACC GTGGACCACGGCCCTCGCTGC TTCTCTCTCGGCCCG TERM 478 2190088 - 2190131 + r 84 -18.8 -2.75022 | opp_overlap 2190090, overlap 2190087 2190090 CGAGCATGGGTGCAA CAGCGAGAGCTGCGGCCCAC CACC GTGGACCACGGCCCTCGCTG CTTCTCTCTCGGCCC TERM 479 2190090 - 2190129 + r 73 -15.6 -2.91997 | opp_overlap 2190090, overlap 2190088 2190087 AGCATGGGTGCAACA GCGAGAGCTGCGGCCCAC CACC GTGGACCACGGCCCTCGC TGCTTCTCTCTCGGC TERM 480 2190129 - 2190090 - R 87 -20 -3.0263 | opp_overlap 2190090 2190088 2190087 AGCATGGGTGCAACA GCGAGAGCTGCGGCCCAC CACC GTGGACCACGGCCCTCGC TGCTTCTCTCTCGGC CMM_1941 2191718 - 2191227 - | hypothetical protein ppaG 2191851 - 2192852 + | putative extracellular serine protease CMM_1943 2194061 - 2192928 - | hypothetical protein CMM_1944 2195218 - 2194058 - | hypothetical protein CMM_1945 2196569 - 2195319 - | putative acyl-CoA dehydrogenase CMM_1946 2197936 - 2196566 - | putative oxidoreductase/monooxygenase ppaH 2198204 - 2199196 + | putative extracellular serine protease TERM 481 2199276 - 2199250 - f 70 -13.6 -3.19463 | CCCATGACGCACCAA CCGGGCGCCCAC GCC GTGCGCGCCCCG CACCGCTCCGACACG ppaI 2199308 - 2200276 + | putative extracellular serine protease CMM_1949 2200532 - 2202031 + | putative MFS permease TERM 482 2202077 - 2202042 - T 86 -20.4 -2.92463 | GCTAGGACGCACAGA TGGCGGGTCCTCGGGC GCCG GCCCGACGACCCGCCG TCACGATCAGCGCGC CMM_1950 2203658 - 2202084 - | putative oxidoreductase CMM_1951 2205178 - 2203679 - | putative glycine betaine aldehyde dehydrogenase betT 2207286 - 2205175 - | BCCT family high-affinity choline/glycine/betaine transport protein CMM_1953 2208182 - 2207514 - | hypothetical protein CMM_1954 2208811 - 2208179 - | hypothetical protein CMM_1955 2209464 - 2208808 - | hypothetical protein CMM_1956 2210534 - 2209461 - | putative monooxygenase CMM_1957 2212168 - 2210531 - | putative peptide ABC transporter, ATP-binding protein CMM_1958 2213013 - 2212165 - | putative peptide ABC transport system, permease component CMM_1959 2213945 - 2213010 - | putative peptide ABC transporter, permease component CMM_1960 2215638 - 2213986 - | putative peptide ABC transporter, substrate-binding protein CMM_1961 2215852 - 2216343 + | putative acetyltransferase clvE 2217126 - 2216380 - | hypothetical protein clvG 2217884 - 2217132 - | hypothetical protein clvF 2218780 - 2217881 - | putative ABC transporter, ATP-binding protein clvR 2219608 - 2218934 - | putative two-component system, response regulator clvK 2220741 - 2219605 - | putative two-component system, sensor kinase TERM 483 2219717 - 2219755 + g 77 -16.7 -3.28712 | gap 1 CAGCGACGGCGGATC GCGGCGAGGCCCCGGTGC TCCT GCAC-GGGGCATCCCCGC TTGTCGCGAACCACG clvA 2221103 - 2221309 + | putative lantibiotic precursor clvM 2221401 - 2224562 + | putative lantibiotic modifying enzyme CMM_1969 2225943 - 2224627 - | hypothetical protein TERM 484 2225544 - 2225576 + g 70 -14.7 -3.21276 | overlap 2225543 TCGGCAACGGCACCG GCGTCGCGGCGGTCG CTG CGGCCGCCCGGGCGC TCTTGTCCCGAGCCA CMM_1970 2226537 - 2226073 - | putative patch repair endonuclease CMM_1971 2228012 - 2226747 - | hypothetical protein TERM 485 2227339 - 2227329 - G 84 -2.4 -4.96762 | GAGACATGACAAAAA GGTC TCT GTCC GCTTGGCCGCGAAGC TERM 486 2228439 - 2228406 - R 73 -14.5 -3.24747 | TCCGGATACGACGAA TGCCCCGGCCGGACC CATA GGTCCTTCCGAGGCA TGTCCGTCGGGCTGA CMM_1972 2229132 - 2228593 - | hypothetical protein CMM_1973 2229419 - 2230750 + | putative acyl-CoA dehydrogenase engA 2232372 - 2230864 - | GTP-binding protein EngA cmkA 2233140 - 2232412 - | putative cytidylate kinase CMM_1976 2234213 - 2233137 - | prephenate dehydrogenase TERM 487 2233866 - 2233820 - G 71 -15.1 -3.13403 | gap 2, overlap 2233818 GCCGGCCGAGGAAGA GGTCGCCGGTCGCGGAGACGGGG CCG CCGCG-CTC-GCGCCCGGCGAGC GGGTGCGATCCGAGG rluA 2235112 - 2234252 - | putative pseudouridine synthase CMM_1978 2235707 - 2235096 - | putative transcriptional regulator CMM_1979 2236494 - 2235697 - | hypothetical protein CMM_1980 2237434 - 2236550 - | putative ATPase involved in partitioning xerD 2238490 - 2237504 - | site-specific tyrosine recombinase XerD CMM_1982 2239164 - 2238487 - | putative NTP pyrophosphatase pyrG 2240903 - 2239161 - | CTP synthetase recN 2242692 - 2240977 - | putative DNA repair protein ppnK 2243602 - 2242685 - | inorganic polyphosphate/ATP-NAD kinase CMM_1986 2244486 - 2243608 - | hypothetical protein CMM_1987 2244688 - 2244479 - | hypothetical protein CMM_1988 2245738 - 2244698 - | putative hydrolase CMM_1989 2246708 - 2245728 - | hypothetical protein TERM 488 2247677 - 2247643 - R 89 -22.2 -2.52464 | opp_overlap 2247640 2247636, overlap 2247647 TCGGGTGTTAACGCA GAAAGGCCCGCCGCAC GAT GTGCGACGGGCCTCCC CGATCATTCTCAAGT TERM 489 2247673 - 2247647 - R 100 -21.6 -3.97368 | opp_overlap 2247640 2247636, overlap 2247643 GTGTTAACGCAGAAA GGCCCGCCGCAC GAT GTGCGACGGGCC TCCCCGATCATTCTC TERM 490 2249038 - 2249049 + r 74 -2.2 -4.7254 | CGTCTTGCGACTTAG CACG GACC TGTG TTTTTAGTAAACAGT TERM 491 2253509 - 2253497 - R 71 -6.2 -4.17316 | opp_overlap 2253503 2253504 ACCCCCGCAAAACAA CCCG CATCC CGGG CGTGTCGCGACGGGC tyrS 2254859 - 2253555 - | hypothetical protein CMM_1991 2255079 - 2255786 + | hypothetical protein CMM_1992 2255783 - 2256382 + | hypothetical protein CMM_1993 2257027 - 2256413 - | 3-methyladenine DNA glycosylase CMM_1994 2257172 - 2257035 - | hypothetical protein argH 2258662 - 2257169 - | argininosuccinate lyase TERM 492 2257730 - 2257766 + g 93 -16.6 -4.02817 | gap 1 GTTGCCGATGAGGCG CCCCGAC-TTGCCGCGC GCGA GCTCGGCGATGTCGGGG TTCTTCTTCTGCGGC argG 2259905 - 2258667 - | argininosuccinate synthase argF 2260877 - 2259954 - | ornithine carbamoyltransferase argD 2262244 - 2261027 - | acetylornithine aminotransferase argB 2263152 - 2262241 - | acetylglutamate kinase argJ 2264330 - 2263176 - | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein argC 2265376 - 2264327 - | N-acetyl-gamma-glutamyl-phosphate reductase pheT 2268049 - 2265506 - | hypothetical protein pheS 2269089 - 2268052 - | phenylalanyl-tRNA synthetase subunit alpha gluD 2270042 - 2269218 - | putative glutamate ABC transpoter, permease component gluC 2270686 - 2270039 - | putative glutamate ABC transpoter, permease component TERM 493 2270165 - 2270117 - G 71 -10.2 -3.82824 | gap 1, overlap 2270114 GATGAGGTAGAAGAA CGCG-ACGCCCACGAACACCCAG ACGA CCGCGTTCCCGTTGGCGTTCGCG ACGTCGCGGCCGACG TERM 494 2270522 - 2270491 - G 71 -15.8 -3.12749 | overlap 2270483 TGAAGAAGGTGAACA CGAGCAGCAGCGGA GTGT TCCGCAGCAGCTCG ACGTAGACGGTGGAG gluB 2271727 - 2270804 - | putative glutamate ABC transporter, substrate-binding protein gluA 2272670 - 2271882 - | putative glutamate ABC transporter, ATP-binding protein CMM_2008 2273622 - 2272822 - | putaive rRNA methyltransferase TERM 495 2273663 - 2273636 - R 100 -22 -3.36452 | ATGGCCCAACACTAA CGGCGCGCCCCC GGAT GGGGACGCGCCG TCGGCGGTGGTGCGG rplT 2274077 - 2273685 - | 50S ribosomal protein L20 rpmI 2274318 - 2274124 - | 50S ribosomal protein L35 infC 2274730 - 2274311 - | translation initiation factor IF-3 TERM 496 2274760 - 2274787 + H 76 -16.4 -3.14132 | gap 1 GGGGCTTGGAATTGG GCGCGACCTCGAC GAG GTCGAGGTCG-GC TTCCTGCGCGAGCCG CMM_2012 2275284 - 2275769 + | hypothetical protein CMM_2013 2276576 - 2275809 - | hypothetical protein hisA 2277322 - 2276573 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase hisH 2278027 - 2277386 - | imidazole glycerol phosphate synthase subunit HisH hisB 2278632 - 2278024 - | imidazoleglycerol-phosphate dehydratase CMM_2017 2279143 - 2278745 - | hypothetical protein TERM 497 2279227 - 2279271 + H 93 -20.9 -3.02511 | gap 1, overlap 2279229 GCGATGCGGGTCCGG CAGC-TCGCACCCGGCTCTC GGCCGG GAGAGCCGGATGCGAAGCTG TGTTCCGAACATACA TERM 498 2279229 - 2279269 + H 81 -17.7 -3.07013 | gap 1, overlap 2279227 GATGCGGGTCCGGCA GC-TCGCACCCGGCTCTC GGCCGG GAGAGCCGGATGCGAAGC TGTGTTCCGAACATA lexA 2279505 - 2280185 + | SOS repressor protein TERM 499 2280208 - 2280234 + T 93 -23 -2.80935 | opp_overlap 2280208 GCACGGCGTACGAGA GCGGCCGGTCCC CGA GGGGCCGGCCGC TCTCGTGCGTGCGGT TERM 500 2280234 - 2280208 - T 90 -20.8 -2.78816 | opp_overlap 2280208 GCACGGCGTACGAGA GCGGCCGGTCCC CGA GGGGCCGGCCGC TCTCGTGCGTGCGGT hflX 2281835 - 2280270 - | putative GTP-binding protein TERM 501 2281749 - 2281706 - G 85 -20.2 -3.02511 | opp_overlap 2281714 2281718 2281728 CGGACCCCCGGAAGA GCGCGTAGCCGGCCGACCGG TTCT CCGCTCGGCCGAGGACGCGC GCGACGACGTCGTGC CMM_2020 2281876 - 2282502 + | hypothetical protein dapF 2283429 - 2282551 - | diaminopimelate epimerase miaA 2284362 - 2283439 - | hypothetical protein miaB 2285945 - 2284359 - | putative methylthioadenine synthetase recX 2286568 - 2285996 - | hypothetical protein recA 2288253 - 2287165 - | recombinase A CMM_2026 2288769 - 2288536 - | hypothetical protein CMM_2027 2289154 - 2288846 - | Cro/CI family transcriptional regulator CMM_2028 2289818 - 2289294 - | hypothetical protein pgsA 2290441 - 2289815 - | hypothetical protein ftsK 2293300 - 2290445 - | cell division protein CMM_2031 2294601 - 2293369 - | putative ABC transporter, permease component CMM_2032 2295305 - 2294598 - | putative ABC transporter, ATPase component CMM_2033 2296327 - 2295302 - | hypothetical protein CMM_2034 2298216 - 2296540 - | metallo-beta-lactamase family hydrolase dapA 2299249 - 2298275 - | putative dihydrodipicolinate synthase CMM_2036 2299389 - 2300642 + | hypothetical protein TERM 502 2300649 - 2300693 + T 100 -22.9 -3.28712 | overlap 2300652 GTCGGGTGAGGCGGA GGACGGCGGCGTCGCCTCG CGGACTA CGGGGCGACGCGGCCGTTC TTCTGGAACGCGGCG TERM 503 2300652 - 2300690 + T 100 -21 -3.78934 | overlap 2300649 GGGTGAGGCGGAGGA CGGCGGCGTCGCCTCG CGGACTA CGGGGCGACGCGGCCG TTCTTCTGGAACGCG thyX 2301463 - 2300672 - | FAD-dependent thymidylate synthase TERM 504 2301288 - 2301339 + g 70 -13.7 -3.23393 | gap 2, overlap 2301287 TCGGTGTCGACGTCG CCCTCGAGGGCGCGGTC--CTGGCC GTCG GGCTCGTCGAGCGCGCGCTCGAGGG TCTTCTCGCCTGCGG CMM_2038 2301571 - 2302491 + | putative nucleoside-diphosphate sugar epimerase CMM_2039 2302961 - 2302512 - | hypothetical protein dapB 2303794 - 2302961 - | hypothetical protein TERM 505 2303071 - 2303016 - G 83 -21.1 -2.62184 | CCGTCGTCCACAGGA CCCGACGGCGCGTCGCCCGC-CGCCGC CTGC GCGGCGCGCTCGCG-CGAGCCGTCGAG GTCGATGAGGCGGTC gmpB 2304456 - 2303854 - | hypothetical protein pepR 2305820 - 2304465 - | M16 family metallopeptidase CMM_2043 2306792 - 2305884 - | hypothetical protein TERM 506 2307402 - 2307382 - R 73 -10.4 -3.85698 | gap 1 CTCCCGCGCGAGAAA GCC-GGCGC AGGA GCGCCTGGC GTCGCGGGTCCAGGA CMM_2044 2308606 - 2307500 - | putative oxidoreductase CMM_2045 2309060 - 2309590 + | hypothetical protein CMM_2046 2309613 - 2309999 + | hypothetical protein TERM 507 2310046 - 2310011 - T 89 -22.7 -2.62616 | overlap 2309999 GTAGCCCGCAGACGA CGGATGCCCGCCCCA TCGAGG TGGGACGGGCATCCG GTTCGAGCGGGTACG pnpA 2312342 - 2310069 - | polynucleotide phosphorylase/polyadenylase TERM 508 2312747 - 2312780 + r 95 -23.9 -2.71011 | overlap 2312749 CTCCCCTTAACGGCG GACGGGCCGCCACCC CGGA GGGTGACGGCCCGTC TGCTTCGCAGGCCGT TERM 509 2312749 - 2312778 + r 86 -20.7 -2.90075 | overlap 2312747 CCCCTTAACGGCGGA CGGGCCGCCACCC CGGA GGGTGACGGCCCG TCTGCTTCGCAGGCC rpsO 2313089 - 2312820 - | 30S ribosomal protein S15 CMM_2049 2313325 - 2314626 + | putative MFS permease CMM_2050 2314653 - 2315384 + | hypothetical protein CMM_2051 2317202 - 2315628 - | 2-oxoglutarate/malate translocator CMM_2052 2319583 - 2317307 - | putative ATP-dependent DNA helicase CMM_2053 2320176 - 2319688 - | hypothetical protein metE2 2320419 - 2321678 + | 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase aptA 2322210 - 2321683 - | adenine phosphoribosyltransferase CMM_2056 2322317 - 2323048 + | hypothetical protein CMM_2057 2323963 - 2323130 - | putative 2,5-diketo-D-gluconic acid reductase lspA 2324600 - 2323986 - | putative lipoprotein signal peptidase CMM_2059 2325137 - 2324610 - | hypothetical protein CMM_2060 2325751 - 2325185 - | cysteine peptidase family protein C56 CMM_2061 2326712 - 2325834 - | hypothetical protein dpsB 2326956 - 2327516 + | putative DNA-binding ferritin-like protein TERM 510 2327542 - 2327571 + F 93 -22.9 -2.62184 | opp_overlap 2327537 ACGCACATCACGACC CGAGGGCCGCGCC GCCA GGTGCGGCCCTCG TCGTGTCCGCGAGGG CMM_2063 2327638 - 2328435 + | short chain dehydrogenase/oxidoreductase CMM_2064 2328435 - 2328644 + | hypothetical protein TERM 511 2328697 - 2328641 - f 100 -22.9 -3.99374 | overlap 2328638 2328644 GCTGACGAAGAAGAA GTAGGGATCCTCCCCCGCGGGTACCGG CGA CCGGTACCCGCGAGGGGCGACCCGCTC GCGGGGCCGCGCCTA TERM 512 2328693 - 2328644 - f 100 -26.5 -3.0438 | gap 1, overlap 2328638 2328641 GACGAAGAAGAAGTA GGGATCCTCCCCCGCGGGTACCGG CGA CCGGTACCCGCGAGGGGCGA-CCC GCTCGCGGGGCCGCG CMM_2065 2328724 - 2329971 + | putative two-component system sensor kinase CMM_2066 2329968 - 2330630 + | putative two-component system response regulator dacB 2332107 - 2330668 - | D-alanyl-D-alanine carboxypeptidase CMM_2068 2332794 - 2332162 - | putative DNA-invertase/recombinase TERM 513 2332844 - 2332883 + r 93 -21.5 -3.18912 | gap 1 CGCCCCCGCGCCACG CGACGACGGACGGGCGCC GATCA GGCGCCCGTCCGTCC-CG TTCATGCGTCGATCA CMM_2069 2333174 - 2332896 - | hypothetical protein CMM_2070 2334481 - 2333276 - | hypothetical protein CMM_2071 2336016 - 2334589 - | putative FAD/FMN-containing dehydrogenase CMM_2072 2336075 - 2337010 + | putative DNA glycosylase CMM_2073 2338063 - 2337014 - | hypothetical protein CMM_2074 2338121 - 2340619 + | ATP-dependent DNA ligase CMM_2075 2340710 - 2341588 + | putative hydrolase CMM_2075A 2341631 - 2341768 + | hypothetical protein CMM_2076 2341812 - 2342720 + | hypothetical protein TERM 514 2342749 - 2342778 + T 90 -22.1 -2.82516 | ACCCCGCACGCGACA GCGCGCCGCAGCC CTCG GGCCGCGGCGCGC TGTCGTCGTCAGGGG aspA 2344315 - 2342798 - | aspartate ammonia-lyase CMM_2078 2344422 - 2345273 + | hypothetical protein CMM_2079 2346041 - 2345295 - | glycosyl transferase family protein CMM_2080 2346231 - 2346752 + | hypothetical protein CMM_2081 2348049 - 2346772 - | Mn2+/Fe2+ transporter CMM_2082 2349622 - 2348147 - | MFS family xanthine/uracil permease TERM 515 2349583 - 2349557 - G 72 -11.4 -3.63515 | opp_overlap 2349558 2349565, overlap 2349558 CGTGATCTCGAAGAA CCGGTCGAGCGC GCC GCGCCCGTCCGT GGTCTCGGGGGCAGG CMM_2083 2349999 - 2349748 - | hypothetical protein pitB 2351177 - 2349996 - | low-affinity inorganic phosphate permease lipT 2352957 - 2351296 - | carboxylesterase CMM_2086 2354537 - 2352954 - | hypothetical protein CMM_2088 2356780 - 2355761 - | putative oxidoreductase CMM_2087 2354629 - 2355816 + | hypothetical protein CMM_2089 2357858 - 2356917 - | putative NAD-dependent epimerase/dehydratase CMM_2090 2360022 - 2359330 - | putative short chain dehydrogenase/oxidoreductase CMM_2091 2360157 - 2360507 + | hypothetical protein hsp20 2360643 - 2361101 + | HSP20 family protein alcBC 2363728 - 2361212 - | putative siderophore biosynthesis protein alcA 2365095 - 2363725 - | putative siderophore biosynthesis enzyme/monooxygenase CMM_2095 2366702 - 2365092 - | L-amino acid decarboxylase CMM_2095A 2366913 - 2367224 + | hypothetical protein CMM_2095B 2367226 - 2367378 + | hypothetical protein CMM_2096 2367480 - 2367764 + | hypothetical protein CMM_2097 2367761 - 2368054 + | hypothetical protein CMM_2098 2368102 - 2368998 + | putative short chain dehydrogenase/oxidoreductase CMM_2099 2369127 - 2369858 + | hypothetical protein CMM_2100 2370741 - 2370010 - | hypothetical protein CMM_2101 2371822 - 2371085 - | hypothetical protein CMM_2102 2372140 - 2373021 + | 2Fe-2S domain-containing protein TERM 516 2373064 - 2373035 - T 93 -21.5 -3.14211 | opp_overlap 2373035 AGGCCGCGGGACGAA GCCGGTGCCCTCC TCGT GGAAGGCACCGGC TTCTCCGTGTCCGAC TERM 517 2373035 - 2373064 + T 91 -19.3 -3.39327 | opp_overlap 2373035 AGGCCGCGGGACGAA GCCGGTGCCCTCC TCGT GGAAGGCACCGGC TTCTCCGTGTCCGAC CMM_2103 2374563 - 2373103 - | hypothetical protein TERM 518 2374208 - 2374264 + g 73 -15.2 -3.18681 | gap 2 CGCTGCACGGCGCGG CGCACGCCGTCCTCCGTGCCCGTCACCT TGA AGTTGACGGTCGCG-ACGACGGCG-GTG TTGATGAAGTTCGCG CMM_2104 2375083 - 2374595 - | hypothetical protein CMM_2105 2375265 - 2375525 + | hypothetical protein CMM_2106 2375647 - 2376999 + | putative sugar ABC transporter, binding protein CMM_2107 2376996 - 2378012 + | putative sugar ABC transporter, permease component CMM_2108 2378009 - 2378977 + | putative sugar ABC transporter, permease component lacZ 2379114 - 2382167 + | beta-galactosidase TERM 519 2382175 - 2382211 + F 76 -17.2 -2.70932 | gap 1 GCCGCTGACGCGGAA CG-GGACCGGGCCGCCC ATCC GGGCGGCCCGGCGCGCG TCCTTCCCCCGGGAG CMM_2110 2382278 - 2383564 + | putative sugar alcohol dehydrogenase CMM_2111 2383679 - 2383948 + | putative glutaredoxin CMM_2112 2383952 - 2385421 + | putative phosphotransferase TERM 520 2385545 - 2385527 - f 71 -14.6 -3.05816 | TGAGGCTGCAGTGAA CGGCGATC CGT GATCGCCG AGAAGAGGTAGTCAT CMM_2113 2385893 - 2386117 + | hypothetical protein TERM 521 2386202 - 2386157 - f 100 -30.7 -2.80443 | overlap 2386188 GCAGAGGGCAGGACA GGGGGCATGCGCACCTTCG GAACGCAT CGAAGGTGCGCATGCCCCC GTCGGTAGGCTGGCG ptrB 2386220 - 2388385 + | putative protease II (oligopeptidase B) thiM 2388531 - 2389358 + | hypothetical protein thiED 2389355 - 2391586 + | multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase CMM_2117 2391766 - 2392656 + | putative fusion protein CMM_2118 2392771 - 2394168 + | putative sugar MFS permease CMM_2119 2394451 - 2394660 + | hypothetical protein CMM_2120 2396863 - 2394728 - | putative DNA helicase TERM 522 2395648 - 2395614 - G 80 -10.5 -4.15044 | GCCTCCGCGAAGAAA CCGGGGTCGGCGGGC GTGAG GCCCGCCTCCTCCAG CTCGCCCATGAGGCG CMM_2121 2397158 - 2398306 + | putative glutathione S-transferase TERM 523 2398627 - 2398581 - g 74 -17.3 -2.71144 | gap 1, opp_overlap 2398626 CACGCTCGCGAAGGA CCTGCGCGCGGTGGTCGTGACG ATGG CGCC-CGACGACGACGCGCAGG CGCTCGCGGGCCTCT CMM_2122 2398306 - 2399100 + | putative esterase CMM_2123 2399437 - 2399063 - | hypothetical protein CMM_2124 2399572 - 2400084 + | hypothetical protein CMM_2125 2400081 - 2400482 + | hypothetical protein CMM_2126 2400540 - 2401580 + | putative Zn-dependant alcohol dehydrogenase CMM_2127 2401913 - 2401596 - | hypothetical protein poxB 2403715 - 2401961 - | pyruvate dehydrogenase CMM_2129 2403823 - 2404554 + | hypothetical protein CMM_2130 2405513 - 2404551 - | putative Zn-dependant oxidoreductase CMM_2131 2405657 - 2406577 + | LysR family transcriptional regulator CMM_2132 2408857 - 2409756 + | TetR family transcriptional regulator CMM_2133 2410391 - 2409753 - | putative lipase/esterase CMM_2134 2410884 - 2410435 - | hypothetical protein TERM 524 2410577 - 2410625 + g 74 -17.3 -2.75074 | overlap 2410574 GGGTTCAGGGGGATG CCGAGCACGTCGATGGTGACGCG CGA CGCGGCGCCGTCGGTGAGGTCGG TGATGTTGCGGTCGC CMM_2135 2412407 - 2410881 - | hypothetical protein CMM_2136 2413242 - 2412481 - | hypothetical protein TERM 525 2413327 - 2413371 + H 86 -20.5 -2.78384 | CGGCGGATGCCGATG CGGACGGCGGGCCGCGCGTCC CGC GGGCGGCCCGCCCGCCGCCCG TATCCTGGACGCCGG CMM_2137 2413422 - 2414360 + | putative sugarkinase CMM_2138 2416014 - 2414413 - | hypothetical protein TERM 526 2416174 - 2416119 - R 81 -18.8 -2.53876 | opp_overlap 2416153 CGGGAGGTGAACGGA GCGCGCGACGCGACCCCTCGCGCG TCAGCCCT CGCGCGCGGCCTCGCGGGGCGCGC GGTCCCAGGTGTCCT cynX 2417408 - 2416143 - | MFS family permease CMM_2140 2417443 - 2418129 + | hypothetical protein ribF 2419058 - 2418126 - | bifunctional riboflavin kinase/FMN adenylyltransferase CMM_2142 2419522 - 2419061 - | hypothetical protein CMM_2143 2419928 - 2419560 - | hypothetical protein truB 2420884 - 2419925 - | tRNA pseudouridine synthase B apbA 2420971 - 2421966 + | 2-dehydropantoate 2-reductase CMM_2146 2422582 - 2422016 - | hypothetical protein mutY 2422621 - 2423499 + | A/G-specific adenine glycosylase rbfA 2424044 - 2423544 - | ribosome-binding factor A TERM 527 2423694 - 2423742 + g 84 -18.3 -3.28712 | gap 3, overlap 2423738 CTGCGCCTGCACGTC CGC-GTCGCGG-CGACGCGCCTCC TCCA GGAGG-GCGTCGATCGCGGCCGCG TTCTCGGGCACGCCG infB 2427058 - 2424224 - | translation initiation factor IF-2 CMM_2150 2427448 - 2427155 - | putative nucleic-acid-binding protein nusA 2428506 - 2427499 - | transcription elongation factor NusA TERM 528 2428577 - 2428534 - R 100 -24.7 -3.53444 | CTATTCGGTTGGAAA CACTCGAGGCTACCCGACC GGGAGG GGTCGGGCAGCCTCGGGTG GGGGCGCGGTGCGGA proS 2430365 - 2428593 - | prolyl-tRNA synthetase CMM_2153 2431398 - 2430397 - | putative NAD(P)H steroid dehydrogenase/isomerase CMM_2154 2434067 - 2431395 - | putative acyl-CoA synthetase CMM_2155 2435106 - 2434075 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 529 2435194 - 2435149 - R 84 -19 -2.83715 | gap 2 CGGACGACTAGCAGA GCCTACGCGCAGCCGGCGCGCG CGGA CGCACGCCGCCCGCGCG--GGC GGGTGGGGAGAGAAG ispG 2436359 - 2435214 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase CMM_2157 2437868 - 2436450 - | M50 family zinc metalloprotease TERM 530 2437567 - 2437509 - G 75 -12.9 -3.63991 | gap 2 GAGGAGGTCGAAGAA GCCGCGGCCGGCGCGGTCGTCGGCGTCCG GGG CGGTCGGCGATC-CGGCGTCGGC-GCGGC GGGTGTCGGGCCCGA TERM 531 2437906 - 2437857 - G 77 -17.1 -3.28416 | gap 1 GAGGATGTAGAGGAA GACG-CCGTCCATGGTGGGAGAGG CTA CCTCCCGCACCCTGGGCGGACGCC GCCGTGGCGCGGATC pknF 2438004 - 2439254 + | putative serine/threonine protein kinase CMM_2159 2439251 - 2439862 + | hypothetical protein dxrA 2441062 - 2439980 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase CMM_2161 2442093 - 2441071 - | putative peptidylprolyl isomerase CMM_2162 2442713 - 2442228 - | hypothetical protein gabT 2442785 - 2444200 + | putative 4-aminobutyrate aminotransferase TERM 532 2444924 - 2444965 + G 77 -17.9 -3.01712 | opp_overlap 2444942 GCTGGGCCATCGACG GTCCCGGCCGCGCGAACAC CGTC GTGATCGAGCGGCTGGGCC TCTTCGCCAAGGGCG CMM_2164 2444200 - 2445210 + | putative asparaginase II CMM_2165 2448691 - 2445200 - | hypothetical protein CMM_2166 2451325 - 2448782 - | hypothetical protein CMM_2167 2452782 - 2451322 - | hypothetical protein CMM_2168 2453822 - 2452779 - | MoxR-like ATPase, putative regulator CMM_2169 2459895 - 2453881 - | putative RTX toxin pknG 2461463 - 2459892 - | hypothetical protein TERM 533 2460769 - 2460807 + g 84 -18.9 -3.29511 | gap 2 CCGGTGGGCAGGGGC CGCGCCCGCTGGATCCGCG CCA CGAGG-TCC-GCGGGCGCG TTCTGCCCGCCTGGC gltA 2462946 - 2461621 - | type II citrate synthase CMM_2172 2464241 - 2463108 - | N-succinyldiaminopimelate aminotransferase fdxB 2464558 - 2464238 - | hypothetical protein CMM_2174 2465891 - 2464599 - | hypothetical protein TERM 534 2466441 - 2466494 + G 82 -18.7 -3.15544 | gap 1, overlap 2466482 2466485 CGCTCCGAGCTGCAG GGCGCCGTCGACCGGGCCAT-CGCGG GCG CCGCGTGGGGCCTCGTCGCCGTCGCC TTCCTCGCGGTCGGC CMM_2175 2466135 - 2467046 + | OFeT family Fe2+ permease CMM_2176 2467123 - 2468340 + | secreted lipoprotein CMM_2177 2468340 - 2469671 + | putative Fe-dependant peroxidase CMM_2178 2470217 - 2469708 - | putative secreted protein TERM 535 2470210 - 2470154 - G 100 -28.7 -2.71364 | overlap 2470139 CGAGGCCGGGAACCA GGACGAGCCCGGCCGCCAGCCCCCTCC TGC GGAGGGACCTGGTGGACGGGCTCGTCG GGGTCATGCTGCGCT bipA 2472131 - 2470224 - | GTP-binding protein typA/bipA-like protein CMM_2180 2474098 - 2472245 - | putative peptide ABC transporter, substrate-binding protein CMM_2181 2475888 - 2474197 - | putative peptide ABC transporter, ATP-binding protein TERM 536 2474619 - 2474668 + g 75 -12.7 -3.62046 | overlap 2474622 GGTTGCGGAAGCTGC GGGGCAGCTCGACCTGCTCGAGG AGCT CCTCGACCCGGTCGCTCTGCTGC TTCTTCGAGAACTGC CMM_2182 2475960 - 2476565 + | hypothetical protein CMM_2183 2477812 - 2476619 - | putative oligopeptide ABC transporter, permease component CMM_2184 2479342 - 2477816 - | putative peptide ABC transporter, permease component CMM_2185 2481356 - 2479521 - | putative peptide ABC transporter, substrate-binding protein CMM_2186 2481646 - 2482461 + | membran protein CMM_2187 2482570 - 2482977 + | hypothetical protein CMM_2188 2482974 - 2484596 + | SSS family transporter membrane protein CMM_2189 2485513 - 2484641 - | RpiR family transcriptional regulator CMM_2190 2486306 - 2485500 - | putative phosphate/phosphonate ABC transporter,permease component CMM_2191 2487097 - 2486303 - | putative phosphate/phosphonate ABC transporter,permease component CMM_2192 2487915 - 2487094 - | putative phosphate/phosphonate ABC transporter,ATP-binding protein CMM_2193 2488896 - 2487919 - | putative phosphate/phosphonate ABC transporter,substrate-binding protein TERM 537 2488031 - 2488057 + g 70 -14.5 -3.24188 | gap 1 GCCGCTGACCCCTCG GGCG-TGGCCGA GTAG TCGGCCAGCGCC TTCGTGATCCTGTCC CMM_2194 2489639 - 2488893 - | putative hydrolase/phosphatase gcvP 2492837 - 2489862 - | glycine dehydrogenase gcvH 2493205 - 2492834 - | glycine cleavage system protein H gcvT 2494422 - 2493202 - | putative aminomethyltransferase (glycine cleavage system T protein) CMM_2198 2495247 - 2494792 - | hypothetical protein CMM_2199 2495374 - 2495745 + | putative transcriptional regulator CMM_2200 2496534 - 2495764 - | putative copper resistance protein CMM_2201 2496636 - 2497937 + | putative cysteine desulfurase CMM_2202 2497934 - 2498377 + | hypothetical protein CMM_2203 2498457 - 2498852 + | hypothetical protein CMM_2204 2501741 - 2498892 - | hypothetical protein CMM_2205 2502455 - 2501901 - | putative acetyltransferase CMM_2206 2502502 - 2503578 + | hypothetical protein CMM_2207 2504160 - 2503597 - | hypothetical protein CMM_2208 2504623 - 2504219 - | hypothetical protein CMM_2209 2504846 - 2505268 + | MarR family transcriptional regulator CMM_2210 2506036 - 2505311 - | hypothetical protein CMM_2211 2506773 - 2506159 - | hypothetical protein CMM_2212 2506863 - 2508329 + | amino acid permease APC family CMM_2213 2508333 - 2508782 + | hypothetical protein CMM_2214 2509215 - 2508793 - | putative thiol-disulfide oxidoreductase CMM_2215 2509535 - 2509981 + | hypothetical protein TERM 538 2509994 - 2510034 + T 90 -21.1 -2.81133 | opp_overlap 2509997 2510015 TGAAAGCGCACATCG AAAGCCGTGGCCCGAACGC AAG GCGTTCGGGCCACGGCCCA TGTCATGGCTCGATC TERM 539 2510031 - 2509997 - T 100 -31.6 -3.71645 | opp_overlap 2509994, overlap 2510015 AAGCGCACATCGAAA GCCGTGGCCCGAACGC AAG GCGTTCGGGCCACGGC CCATGTCATGGCTCG CMM_2216 2510237 - 2510037 - | hypothetical protein gabP 2510689 - 2512101 + | gamma-aminobutyrate permease CMM_2218 2512152 - 2512844 + | hypothetical protein CMM_2219 2512868 - 2513431 + | hypothetical protein CMM_2220 2513431 - 2514198 + | hypothetical protein CMM_2221 2514367 - 2515011 + | hypothetical protein CMM_2222 2515967 - 2515482 - | hypothetical protein CMM_2223 2517210 - 2516137 - | translation-associated GTPase CMM_2224 2517310 - 2517939 + | hypothetical protein CMM_2225 2518006 - 2519385 + | hypothetical protein fbaA 2519491 - 2520516 + | fructose-bisphosphate aldolase TERM 540 2520587 - 2520548 - T 100 -36.6 -3.21099 | GCGCGGCACCACGAA CGACGGCGGGGCCGGTCC ACCA GGACCGGCCCCGCCGTCG TGCGCGCAGGAGGAT CMM_2227 2521448 - 2520612 - | hypothetical protein TERM 541 2521101 - 2521146 + g 89 -20.3 -3.31144 | gap 1, overlap 2521054 CGTGCCCCGGCGATC GGCCGCGGCGGCCTTCTCGGCG GCG CGACGGGC-GTCCGCCGCGGCC TTCTCCGCGTCGCGG ispH 2522434 - 2521445 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase xseA 2522582 - 2523898 + | exodeoxyribonuclease VII large subunit xseB 2523909 - 2524151 + | exodeoxyribonuclease VII small subunit CMM_2231 2524154 - 2524861 + | hypothetical protein cynT 2524858 - 2525520 + | putative carbonic anhydrase fumC 2525602 - 2527026 + | fumarate hydratase CMM_2234 2527058 - 2527327 + | hypothetical protein CMM_2235 2528766 - 2527411 - | putative ATPase uppS2 2529779 - 2528994 - | putative undecaprenyl diphosphate synthase CMM_2237 2529861 - 2530616 + | HlyIII family membrane protein CMM_2238 2532020 - 2530641 - | putative sugar ABC transporter, substrate-binding protein CMM_2239 2532996 - 2532082 - | putative glycerol ABC transporter, permease component CMM_2240 2533982 - 2532993 - | putative glycerol ABC transporter, permease component CMM_2241 2534506 - 2534162 - | hypothetical protein CMM_2242 2535387 - 2534506 - | hypothetical protein CMM_2243 2535454 - 2535936 + | hypothetical protein TERM 542 2536136 - 2536106 - g 72 -14 -3.40052 | overlap 2536104 AGATCGCGAAGAAGA TCGAGATCGCCCGC GAG GAGGGCGACCTCAA GGAGAACGGCGGCTA greA 2535997 - 2536485 + | transcription elongation factor GreA ilvA 2537820 - 2536552 - | threonine dehydratase CMM_2246 2539160 - 2537925 - | AI-E2 family membrane protein CMM_2247 2539261 - 2540511 + | hypothetical protein CMM_2248 2541088 - 2540522 - | hypothetical protein bglL 2542593 - 2541091 - | putative beta-glucosidase CMM_2250 2542734 - 2545028 + | hypothetical protein CMM_2251 2545161 - 2546603 + | amino acid permease APC family TERM 543 2546658 - 2546624 - T 93 -23.7 -2.82516 | gap 1 GGCCGTACGACGACA GGGGCGCCGCCCACCT CACG AGGTG-GCGGCGCCCC TGCTGCATGTCGCCT CMM_2252 2547620 - 2546679 - | hypothetical protein CMM_2253 2550366 - 2547805 - | hypothetical protein CMM_2254 2550872 - 2550438 - | putative anti-sigma regulatory factor (Ser/Thr protein kinase) CMM_2255 2551215 - 2550877 - | putative anti-sigma factor antagonist CMM_2256 2553203 - 2551212 - | putative glycosyl transferase CMM_2257 2554396 - 2553200 - | putative protein kinase/phosphatase regulator hybrid protein CMM_2258 2554575 - 2555729 + | putative membrane-bound acyltransferase CMM_2259 2557432 - 2555945 - | putative NADH dehydrogenase TERM 544 2556391 - 2556416 + g 79 -14.7 -3.63515 | AGTAGTCGGTGATCC CCTCGCCGCGG AGGC TCGCGGTGAGG TTCTTCGCCATGAGC CMM_2260 2558753 - 2557470 - | serine peptidase CMM_2261 2559265 - 2558750 - | hypothetical protein CMM_2262 2559834 - 2559262 - | hypothetical protein eno 2561202 - 2559922 - | phosphopyruvate hydratase hisS 2562626 - 2561319 - | histidyl-tRNA synthetase CMM_2265 2563280 - 2562639 - | TetR family transcriptional regulator CMM_2266 2564199 - 2563435 - | nucleoside triphosphate pyrophosphohydrolase nhaA2 2564307 - 2565536 + | NhaA family Na+/H+ antiporter mfdA 2569192 - 2565560 - | putative transcription-repair coupling factor pthA 2569868 - 2569281 - | peptidyl-tRNA hydrolase rplY 2570653 - 2570009 - | 50S ribosomal protein L25 CMM_2271 2572833 - 2570824 - | putative gluconokinase/dehydrogenase gndA2 2572917 - 2574371 + | 6-phosphogluconate dehydrogenase TERM 545 2574392 - 2574422 + F 95 -26.9 -2.88544 | opp_overlap 2574364 GCCGACCGTCGCCGA CGCCCCGCCGCCC CTCGT GGGCGGCGGGGCG TCTGTCACACTGGGG CMM_2273 2574441 - 2574815 + | hypothetical protein prsA 2575838 - 2574861 - | ribose-phosphate pyrophosphokinase TERM 546 2575079 - 2575095 + g 71 -9.3 -3.9461 | opp_overlap 2575058 2575056 GCGTGGCCGCGACGA CGACGCC CGT GGCGCCG TTCTTCTTCAGGGCC glmU 2577397 - 2575853 - | putative UDP-N-acetylglucosamine pyrophosphorylase TERM 547 2577662 - 2577715 + G 70 -14.6 -3.30124 | gap 3 GGGATGCCCAGCCGC GACGAGGTC-GACCGCATCGTCGACGC GTG GCGGCG-CGA-GCGGCCCGACCTCGAC TTCTCCCCGCTCGAG CMM_2276 2577650 - 2578153 + | MarR family transcriptional regulator CMM_2277 2578538 - 2578182 - | putative DNA-binding protein TERM 548 2578499 - 2578527 + g 70 -16 -2.63715 | gap 1 CCGCCTCCAGGGCCG CGCGCGCGTCCGC CGGA GCGGGCGCG-GCG TCGTCTGCCATGGAT CMM_2278 2579556 - 2578549 - | putative monooxygenase CMM_2279 2580359 - 2579559 - | amino acid transporter LysE CMM_2280 2580429 - 2581325 + | LysR family transcriptional regulator CMM_2281 2582022 - 2581363 - | putative metal ABC transporter, permease component CMM_2282 2583061 - 2582024 - | putative metal ABC transporter, ATP-binding protein CMM_2283 2583990 - 2583058 - | putative metal ABC transporter, substrate-binding protein CMM_2284 2584336 - 2585238 + | hypothetical protein CMM_2285 2587068 - 2585251 - | putative ABC transporter, duplicated ATP-binding protein TERM 549 2586316 - 2586364 + g 71 -11.1 -3.73534 | gap 4, overlap 2586316 2586318 2586322 CTCGATCCGGAACTT GG-GCTTG-GCGG-TGCG-CGCGGG CGC CCCGCGGCGCAGCCACGCGAGCTCC TTCTTCATGAGGTTC TERM 550 2587692 - 2587673 - g 75 -3.6 -4.56597 | gap 1, overlap 2587676 TTCGGTTTTCAAAAA GATTGCGTG ACG CACG-AACC CACAGAAGCCGCACT intA 2587139 - 2588842 + | putative integrase/recombinase TERM 551 2589273 - 2589320 + T 100 -23 -3.04836 | opp_overlap 2589278 2589279 2589281, overlap 2589279 CGCCCTGGTTGCTCT CAAAAGGATCCCCTGCGAACTG TGTG TAGCTCGCAGGGGATCTTTTTG TCGTTTGTCGTCATG TERM 552 2589315 - 2589278 - T 90 -16.4 -4.07568 | opp_overlap 2589273 2589279, overlap 2589279 2589281 TGGTTGCTCTCAAAA GGATCCCCTGCGAACT GTGTGT AGCTCGCAGGGGATCT TTTTGTCGTTTGTCG TERM 553 2589314 - 2589279 - T 87 -19.9 -3.04398 | opp_overlap 2589273 2589279, overlap 2589278 2589281 GGTTGCTCTCAAAAG GATCCCCTGCGAACT GTGTGT AGCTCGCAGGGGATC TTTTTGTCGTTTGTC TERM 554 2589279 - 2589314 + T 100 -18.4 -5.06735 | opp_overlap 2589279 2589278 2589281, overlap 2589273 GGTTGCTCTCAAAAG GATCCCCTGCGAACTG TGTG TAGCTCGCAGGGGATC TTTTTGTCGTTTGTC TERM 555 2589312 - 2589281 - T 79 -16.7 -3.08032 | opp_overlap 2589279 2589273, overlap 2589279 2589278 TTGCTCTCAAAAGGA TCCCCTGCGAACT GTGTGT AGCTCGCAGGGGA TCTTTTTGTCGTTTG CMM_2287 2591448 - 2589829 - | hypothetical protein CMM_2288 2591923 - 2591441 - | hypothetical protein CMM_2289 2593186 - 2592071 - | hypothetical protein CMM_2290 2594184 - 2594678 + | putative endonuclease TERM 556 2594742 - 2594783 + T 95 -16.7 -4.20106 | gap 1, overlap 2594748 AATTGCCCGATGATC CGGAACCGCCCTCGACGC TCACCCT GCGTCGGGGGCG-TTCTG TTTTAGATGCGGTTT TERM 557 2594748 - 2594778 + T 91 -17.6 -3.97622 | overlap 2594742 CCGATGATCCGGAAC CGCCCTCGACGC TCACCCT GCGTCGGGGGCG TTCTGTTTTAGATGC CMM_2291 2596027 - 2595263 - | putative endonuclease CMM_2292 2597857 - 2596073 - | hypothetical protein CMM_2293 2598067 - 2598270 + | hypothetical protein CMM_2294 2598267 - 2598668 + | hypothetical protein CMM_2295 2599259 - 2599699 + | pilin TERM 558 2599793 - 2599767 - T 87 -18 -3.53091 | opp_overlap 2599767 AGTCGTCCTGCTAAA CGGCCGTCACAC TAG GGGTGACGGCCG TTTTAGTGTCAGCTT TERM 559 2599767 - 2599793 + T 100 -18 -4.35518 | opp_overlap 2599767 AGTCGTCCTGCTAAA CGGCCGTCACAC TAG GGGTGACGGCCG TTTTAGTGTCAGCTT CMM_2296 2601316 - 2600459 - | hypothetical protein TERM 560 2602427 - 2602413 - g 85 -5.6 -4.78572 | CGCGAACGAACAAAA CTGGGC CTC GCGCAG CTAATCGAAGGTGGC CMM_2297 2602014 - 2602694 + | putative resolvase CMM_2298 2602691 - 2602870 + | hypothetical protein CMM_2299 2602854 - 2603441 + | hypothetical protein CMM_2300 2603570 - 2604280 + | hypothetical protein TERM 561 2605672 - 2605688 + F 74 -10.1 -4.11394 | GGTTTTTGCTGAGAG CGCTGTC GTA GACGGCG TTTTACCACTGGCCT CMM_2301 2605923 - 2606174 + | hypothetical protein CMM_2302 2606807 - 2606235 - | hypothetical protein TERM 562 2606481 - 2606498 + g 71 -7.7 -4.10161 | TGGTTCGAGGTGACG CAGCATC TCTG GGTGCTG TTTTACGAACTCGTC TERM 563 2606986 - 2607014 + r 83 -5.2 -4.88067 | gap 1 GAGTGATGCCATTGT GTGATGCGTCGCG CGAA CG-GTCGCAGCAC TTTTTCTAGATCGCT TERM 564 2607050 - 2607085 + r 91 -20.6 -3.36749 | opp_overlap 2607054, overlap 2607054 ATGTCCGTTCTACGA GCAAGGCCCTCGAC GCTCAACA GTCGAGGGCCTTGC TTACTGTTGGACCTA TERM 565 2607081 - 2607054 - R 70 -14.2 -3.21099 | gap 1, opp_overlap 2607050 2607054 CCGTTCTACGAGCAA GGCCCTCGAC-GC TCA ACAGTCGAGGGCC TTGCTTACTGTTGGA TERM 566 2607054 - 2607081 + r 75 -14.2 -3.45768 | opp_overlap 2607054, overlap 2607050 CCGTTCTACGAGCAA GGCCCTCGAC GCTCAACA GTCGAGGGCC TTGCTTACTGTTGGA CMM_2303 2607688 - 2607098 - | hypothetical protein CMM_2304 2608245 - 2607802 - | hypothetical protein CMM_2305 2609051 - 2610355 + | putative multidrug-efflux MFS permease CMM_2306 2610519 - 2610689 + | hypothetical protein CMM_2307 2610836 - 2612569 + | hypothetical protein CMM_2309 2613452 - 2612952 - | hypothetical protein CMM_2308 2612566 - 2613045 + | hypothetical protein CMM_2310 2614183 - 2613449 - | putative glycosyl transferase moaE 2616055 - 2615624 - | molybdopterin cofactor biosynthesis protein moaB 2616606 - 2616052 - | putative molybdenum cofactor biosynthesis protein moaC 2617097 - 2616603 - | putative molybdenum cofactor biosynthesis protein moaA1 2618382 - 2617090 - | putative molybdopterin biosynthesis protein CMM_2315 2618515 - 2618739 + | hypothetical protein CMM_2316 2618837 - 2619610 + | putative carboxyphosphonoenolpyruvate phosphonomutase TERM 567 2619643 - 2619688 + F 100 -27.6 -3.05384 | opp_overlap 2619611 CTCGGTCCACGTCGA CCGGGGCGCGGCGGATGCGG TCGAGC CCGCGTCCACCGCGCCCTGG TTGACTGGGCACCCA CMM_2317 2619720 - 2620640 + | putative methylthioadenosine phosphorylase TERM 568 2621334 - 2621354 + G 85 -19.7 -3.01712 | overlap 2621339 TCCGCTCGGCGCTCG CGCGCGGCG AGG CGCCGCGCG TCTTCGAGGACGGCC galE3 2620637 - 2621701 + | putative UDP-glucose 4-epimerase CMM_2319 2621822 - 2622271 + | hypothetical protein CMM_2320 2623118 - 2622330 - | putative short chain dehydrogenase/oxidoreductase CMM_2321 2624224 - 2623196 - | hypothetical protein CMM_2322 2624799 - 2624335 - | hypothetical protein CMM_2323 2625038 - 2624856 - | hypothetical protein CMM_2324 2625536 - 2626249 + | hypothetical protein CMM_2325 2626246 - 2627307 + | hypothetical protein CMM_2326 2627593 - 2628633 + | putative permease CMM_2327 2628620 - 2629543 + | hypothetical protein CMM_2328 2629551 - 2630942 + | hypothetical protein CMM_2329 2630973 - 2631356 + | hypothetical protein TERM 569 2631384 - 2631431 + T 100 -24.8 -3.484 | CAGCCCGACCCCGCA CGCGCCGACGGCCCCGGCTCCC CGGA GGGAGACGAGGCCGTCGATGCG TTCTGCTGTGATCGC CMM_2330 2632172 - 2631480 - | hypothetical protein CMM_2331 2632438 - 2633121 + | hypothetical protein CMM_2332 2633452 - 2633198 - | hypothetical protein CMM_2333 2635188 - 2633569 - | putative membrane-bound oxidoreductase TERM 570 2634680 - 2634625 - G 70 -13.8 -3.23216 | gap 1 CGTCATGAGGAGGAA CGTGCGGCGCTCGACGCGCGCACCC GCGCCCG GGGTGAGCGGGGCGCGCGCGGC-CG GGCGGGCGATGCCGC CMM_2334 2636447 - 2635185 - | putative two-component system sensor kinase CMM_2335 2637295 - 2636444 - | putative two-component system response regulator CMM_2336 2637444 - 2638151 + | putative glycosyltransferase CMM_2337 2638148 - 2638831 + | hypothetical protein CMM_2339 2639957 - 2639478 - | hypothetical protein CMM_2338 2638828 - 2639529 + | putative SAM-dependant methyltransferase CMM_2340 2641198 - 2639957 - | hypothetical protein CMM_2341 2641277 - 2642725 + | hypothetical protein modC 2643784 - 2642726 - | putative molybdate ABC transporter, ATP-binding protein modB 2644638 - 2643781 - | putative molybdate ABC transporter, permease component modA 2645434 - 2644628 - | putative molybdate ABC transporter, substrate-binding protein CMM_2345 2645946 - 2645434 - | putative transcriptional regulator involved in molybdate uptake moaA 2646067 - 2647125 + | molybdenum cofactor biosynthesis protein A moaD 2647139 - 2647393 + | putative molybdopterin converting factor CMM_2348 2647417 - 2648304 + | putative siderophore-interacting protein TERM 571 2648931 - 2648883 - g 84 -18.9 -3.28712 | gap 2, overlap 2648884 CCCGTGGCGCGACAA CGTGGC-GC-TCGTCGGCGAGGC GCTCG GCCGCGCCGACGACGCCGCCGCG CTCCTCGGCGACTAC TERM 572 2648927 - 2648884 - g 81 -20.3 -2.57132 | gap 1, overlap 2648883 CCGTGGCGCGACAAC GTGGCGCTCGTCGGCGAGGC GCTCG GCCGCGCCGACGA-CGCCGC CGCGCTCCTCGGCGA fecB1 2648374 - 2649348 + | putative Fe3+-siderophore ABC transporter,substrate-binding protein fecC1 2649345 - 2650358 + | putative Fe3+-siderophore ABC transporter,permease component TERM 573 2650968 - 2651021 + G 76 -18.7 -2.62616 | overlap 2650986 GGGGCGCGGGGACGC TCGCGGGCGTCGACGCGACGGGCGT GGGC ACAGCCGCCGCGTCGACGGCCGTGC TGCTGTGCGCGGTGC fecD1 2650355 - 2651407 + | putative Fe3+-siderophore ABC transporter,permease component CMM_2352 2651932 - 2651453 - | hypothetical protein CMM_2353 2653007 - 2652042 - | hypothetical protein CMM_2354 2653354 - 2653004 - | GntR family transcriptional regulator CMM_2355 2654468 - 2653401 - | LacI family transcriptional regulator CMM_2356 2656480 - 2654447 - | putative oxidoreductase CMM_2357 2656919 - 2656608 - | ArsR family transcriptional regulator CMM_2358 2657335 - 2656919 - | hypothetical protein CMM_2359 2657946 - 2657452 - | hypothetical protein CMM_2360 2658055 - 2658552 + | hypothetical protein CMM_2361 2659216 - 2658605 - | acetyltransferase CMM_2362 2659384 - 2660649 + | hypothetical protein moeB 2661864 - 2660677 - | putative molybdenum cofactor biosynthesis protein CMM_2364 2661863 - 2663569 + | hypothetical protein CMM_2365 2664442 - 2663582 - | putative hydrolase TERM 574 2664608 - 2664569 - g 85 -20 -3.01712 | gap 1 TGGCCGTGCTGAACA GCGCGCCGGTGGTCGACGG CCA CCG-CGACGACCGGCTCGC CGGCGCATCCGGCCG CMM_2366 2664529 - 2665032 + | hypothetical protein ispE 2666982 - 2666044 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase ksgA 2667907 - 2666993 - | dimethyladenosine transferase CMM_2369 2668854 - 2667904 - | hypothetical protein metS 2670503 - 2668926 - | methionyl-tRNA synthetase gltA1 2671717 - 2670566 - | methylcitrate synthase CMM_2372 2671965 - 2673452 + | putative dihydrolipoamide dehydrogenase (E3) component CMM_2373 2673487 - 2674095 + | putative NAD(P)H oxidoreductase CMM_2374 2675161 - 2674118 - | putative Zn-dependant alcohol dehydrogenase CMM_2375 2675207 - 2675797 + | TetR family transcriptional regulator CMM_2376 2676240 - 2675821 - | hypothetical protein CMM_2377 2676441 - 2677838 + | putative SAM-dependent methyltransferase TERM 575 2679517 - 2679559 + G 72 -11.3 -3.61398 | CCGCTTCGGCGCGCC CGGG-GGCTGGCGCGGCGT CGTGCAC ACGC-GCACCGGCCGCCCG TTCTTCGGCGCCGCC CMM_2378 2677835 - 2680420 + | putative phosphatase prpB 2681553 - 2680639 - | putative methylisocitrate lyase/phosphonomutase prpD 2683103 - 2681553 - | putative 2-methylcitrate dehydratase TERM 576 2682417 - 2682460 + g 71 -13 -3.46602 | CGCGGGCGCGTGCGC CTTCCACGTGCTGATCGCGC CCTT GCGCGACTGGCGCGTGGCCG TTGTGGTGTGGAGGG CMM_2381 2683142 - 2684110 + | putative duplicated acetyltransferase CMM_2382 2685035 - 2686447 + | putative perforin TERM 577 2686620 - 2686590 - T 87 -20.4 -3.27022 | opp_overlap 2686591, overlap 2686591 GGGACCGGACATGAA GCGAGCCCGCCGCC CGG AGCGGCGGGCTCGG TCGCGCGAGCTCGTT TERM 578 2686619 - 2686591 - T 95 -23.9 -2.55999 | opp_overlap 2686591, overlap 2686590 GGACCGGACATGAAG CGAGCCCGCCGCC CGG AGCGGCGGGCTCG GTCGCGCGAGCTCGT CMM_2383 2687451 - 2686864 - | hypothetical protein CMM_2384 2687476 - 2688069 + | putative sugar acetyltransferase CMM_2385 2688066 - 2688659 + | TetR family transcriptional regulator TERM 579 2688980 - 2689000 + G 70 -16.1 -2.64616 | GCATCGGCGCCCTCA CCGCGGCGG CCG CCGCCGTGG TGCTCTCCGTCGGCA CMM_2386 2688928 - 2690457 + | putative membrane-bound tyrosin-protein phosphatase CMM_2387 2690466 - 2691113 + | hypothetical protein CMM_2388 2691192 - 2692289 + | hypothetical protein CMM_2389 2693273 - 2692308 - | permease DMT family CMM_2390 2693347 - 2693907 + | hypothetical protein CMM_2391 2694742 - 2693927 - | putative methyltransferase CMM_2392 2695059 - 2694739 - | hypothetical protein CMM_2393 2695639 - 2696082 + | hypothetical protein CMM_2394 2696316 - 2696095 - | hypothetical protein aglB 2696499 - 2698745 + | putative alpha glycosidase CMM_2396 2699334 - 2698798 - | hypothetical protein CMM_2397 2699902 - 2699336 - | hypothetical protein TERM 580 2701753 - 2701768 + G 71 -10.4 -3.7941 | GATCCTCGTGGTCTG CGCGCT CGTC AGCGCG TTCTTCTACCCGCTG CMM_2398 2700125 - 2701852 + | putative dolichyl-phosphate-mannose-protein mannosyltransferase CMM_2399 2701852 - 2702856 + | hypothetical protein CMM_2400 2702957 - 2704252 + | putative O-acetylhomoserine (thiol)-lyase CMM_2401 2704249 - 2705022 + | hypothetical protein CMM_2402 2705550 - 2705041 - | hypothetical protein CMM_2403 2705737 - 2705997 + | hypothetical protein TERM 581 2706016 - 2706055 + F 95 -24.4 -2.82516 | gap 1 TTCCTGCTCCACGGA GCCCTCGTCGCCTGATCCG GAC CGGATC-GGCGGCGGGGGC TCTCGTCATCCCCGG CMM_2404 2706088 - 2706834 + | hypothetical protein sdaA 2706844 - 2708211 + | putative L-serine dehydratase CMM_2406 2708249 - 2708644 + | hypothetical protein CMM_2407 2709747 - 2708641 - | hypothetical protein CMM_2408 2710535 - 2709744 - | IclR family transcriptional regulator CMM_2409 2711326 - 2710532 - | putative NDP-sugar epimerase CMM_2410 2711440 - 2712786 + | putative sugar ABC transporter, substrate-binding protein CMM_2411 2712783 - 2713745 + | putative sugar ABC transporter, permease component CMM_2412 2713742 - 2714647 + | putative sugar ABC transporter, permease component CMM_2413 2714652 - 2715884 + | putative glucarate dehydratase CMM_2414 2715884 - 2716852 + | 5-dehydro-4-deoxyglucarate dehydratase CMM_2415 2718758 - 2716857 - | hypothetical protein corA2 2719976 - 2718810 - | Mg2+/Co2+ transporter CMM_2417 2720866 - 2720024 - | putative aldo/keto reductase fadD 2722449 - 2720863 - | putative long-chain-fatty-acid-CoA ligase CMM_2419 2722590 - 2726408 + | putative ATP-dependent helicase CMM_2420 2726599 - 2728137 + | putative peptide ABC transporter, substrate-binding protein CMM_2421 2728134 - 2729108 + | putative peptide ABC transporter, permease component CMM_2422 2729105 - 2729929 + | putative peptide ABC transporter, permease component CMM_2423 2729926 - 2731371 + | putative peptide ABC transporter, ATP-binding protein CMM_2424 2732382 - 2731414 - | hypothetical protein CMM_2425 2732978 - 2732379 - | hypothetical protein sseB 2734817 - 2733969 - | putative thiosulfate sulfurtransferase CMM_2427 2735379 - 2734846 - | putative acetyltransferase nrdF 2736509 - 2735514 - | ribonucleotide-diphosphate reductase subunit beta nrdA 2739185 - 2736681 - | ribonucleotide-diphosphate reductase subunit alpha CMM_2430 2739562 - 2740773 + | putative MFS permease CMM_2431 2740869 - 2741342 + | hypothetical protein TERM 582 2741394 - 2741358 - T 100 -29.6 -3.05384 | opp_overlap 2741360, overlap 2741360 CCCTCCCGCACGGAA GACGGCCCCGGTCAGC GCGAT GCTGACCGGGGCCGTC GTCTGCCCGGCGCGA TERM 583 2741392 - 2741360 - T 100 -26.4 -3.08679 | opp_overlap 2741360, overlap 2741358 CTCCCGCACGGAAGA CGGCCCCGGTCAGC GCGAT GCTGACCGGGGCCG TCGTCTGCCCGGCGC TERM 584 2741360 - 2741392 + T 100 -27.1 -2.62184 | opp_overlap 2741360 2741358 CTCCCGCACGGAAGA CGGCCCCGGTCAGCG CGA TGCTGACCGGGGCCG TCGTCTGCCCGGCGC CMM_2432 2742402 - 2741410 - | putative aldo/keto reductase CMM_2433 2742984 - 2742412 - | hypothetical protein CMM_2434 2743501 - 2744685 + | secreted serine protease abfA2 2746294 - 2744756 - | putative alpha-L-arabinofuranosidase TERM 585 2745058 - 2745086 + g 72 -14.5 -3.41051 | AGGTCGCGCTCACGT CGACCACGTCGGC GGT GCCGAAGCGGTCG TTGTCGTAGCGGTCG CMM_2436 2747309 - 2746389 - | putative L-arabinose ABC transporter, permease component CMM_2437 2748250 - 2747306 - | putative L-arabinose ABC transporter, permease component CMM_2438 2749694 - 2748345 - | putative L-arabinose ABC transporter, substrate binding protein TERM 586 2749129 - 2749171 + g 70 -14.1 -3.24924 | overlap 2749128 2749130 GTGATCTCCTCGAGC TGGCCGTCGCCGCCCAG CACGCCCGC CTGGGCCGCGACGTCCG TGTTGTACATGAGGA CMM_2439 2750800 - 2749799 - | LacI family transcriptional regulator CMM_2440 2750921 - 2751358 + | hypothetical protein CMM_2441 2751773 - 2751378 - | hypothetical protein CMM_2442 2753402 - 2751783 - | putative methyltransferase TERM 587 2753232 - 2753178 - G 73 -15.5 -3.21099 | gap 1, overlap 2753181 GTCGCCCAGCACGAA CAGGGCCGCGAGCAC-GGCGGCTGCC GGGA GGCCGTCGGCGGTGCGCGCGGCCTCG ACGGCGCGACGGGCC TERM 588 2753229 - 2753181 - G 73 -18 -2.50016 | gap 1, overlap 2753178 GCCCAGCACGAACAG GGCCGCGAGCAC-GGCGGCTGCC GGGA GGCCGTCGGCGGTGCGCGCGGCC TCGACGGCGCGACGG celB 2755086 - 2753479 - | cellulase TERM 589 2754411 - 2754381 - G 70 -14.7 -3.24924 | gap 1, overlap 2754379 2754382 GGTTGACCGACAACA CCGCGTCGCCGCCG CGCT CGGCGGCGA-GCCG CCAATCGGTGGCCGT TERM 590 2755192 - 2755163 - R 82 -12.9 -4.07568 | opp_overlap 2755170, overlap 2755164 2755170 GCGCTGCTGGGAAAA GCAAAAACCCCGC CGGA GCGGGGTTCTTGT GGACCTAAGGAGATT TERM 591 2755191 - 2755164 - R 75 -16.4 -3.04398 | opp_overlap 2755170, overlap 2755163 2755170 CGCTGCTGGGAAAAG CAAAAACCCCGC CGGA GCGGGGTTCTTG TGGACCTAAGGAGAT TERM 592 2755185 - 2755170 - R 100 -11.8 -5.0925 | opp_overlap 2755170, overlap 2755164 2755163 TGGGAAAAGCAAAAA CCCCGC CGGA GCGGGG TTCTTGTGGACCTAA TERM 593 2755170 - 2755185 + r 76 -11.8 -3.79906 | opp_overlap 2755170 2755164 2755163 TGGGAAAAGCAAAAA CCCCGC CGGA GCGGGG TTCTTGTGGACCTAA CMM_2444 2756392 - 2755424 - | hypothetical protein CMM_2445 2757147 - 2756479 - | putative acetyltransferase galU 2758101 - 2757205 - | putative UTP-glucose-1-phosphate uridylyltransferase CMM_2447 2758142 - 2758717 + | putative 5-formyltetrahydrofolate cyclo-ligase CMM_2448 2758724 - 2759131 + | hypothetical protein CMM_2449 2759160 - 2759642 + | putative large-conductance mechanosensitive channel CMM_2451 2763675 - 2759950 - | hypothetical protein CMM_2452 2764021 - 2764482 + | Cro/CI family transcriptional regulator /nucleotidyltransferase CMM_2453 2764482 - 2764814 + | hypothetical protein CMM_2454 2765937 - 2764825 - | putative restriction enzyme CMM_2455 2766824 - 2768191 + | cytosine/purine permease NCS1 family TERM 594 2768251 - 2768220 - g 82 -19.4 -3.14132 | CGTCGGCGGCACCAA CACGGACGCCGTGC TCAT GCACGGCGACCGCG TCGTCGTCGGCATCA CMM_2456 2768188 - 2769747 + | putative hydantoinase CMM_2457 2769740 - 2770855 + | hypothetical protein CMM_2458 2770882 - 2771997 + | hypothetical protein CMM_2459 2771994 - 2773559 + | hypothetical protein CMM_2460 2775175 - 2773568 - | putative ATPase CMM_2461 2775387 - 2776169 + | hypothetical protein CMM_2462 2776527 - 2776877 + | putative Lsr2-like protein TERM 595 2776915 - 2776944 + F 86 -19.4 -3.21099 | opp_overlap 2776917 CGCAGCACTTGCGAA GAGGGCCGATCC GCCACA GGATCGGCCCTC TTCGTCGTCCCACGG TERM 596 2776942 - 2776917 - f 75 -16.2 -3.03441 | opp_overlap 2776915 CAGCACTTGCGAAGA GGGCCGATCC GCCACA GGATCGGCCC TCTTCGTCGTCCCAC CMM_2463 2777098 - 2778465 + | hypothetical protein TERM 597 2778490 - 2778515 + F 70 -14.7 -2.87931 | GGATCAGCCGAGGGA GCGCCCGACGA CCCG TCGTCAGGCGC TCTCTCGCGCGTAGC CMM_2464 2778699 - 2779463 + | putative transcriptional activator CMM_2465 2781578 - 2779506 - | serine protease CMM_2466 2782110 - 2781613 - | putative restriction endonuclease TERM 598 2782216 - 2782179 - R 75 -16.3 -3.01712 | opp_overlap 2782185 CCGCCCCCGGGAACA CGCGAAGGCACCGCCGA GTGC TCGGCGATGCCTTCTAG GAGAGCGGGTGACCG TERM 599 2782185 - 2782210 + r 75 -14.7 -3.28712 | opp_overlap 2782179 CCGGGAACACGCGAA GGCACCGCCGA GTGC TCGGCGATGCC TTCTAGGAGAGCGGG CMM_2467 2783414 - 2782470 - | putative secreted hydrolase dtxR 2784436 - 2783738 - | putative iron-dependent repressor serC 2784545 - 2785663 + | phosphoserine aminotransferase TERM 600 2785719 - 2785684 - T 100 -27.6 -2.62184 | GCCTCCCGGACATGA CGACGGCGGCGGCCCC CGAG GGGGTCGCCGCCGTCG TCATGCGGTACGCGG CMM_2470 2786401 - 2785736 - | hypothetical protein cspB 2786777 - 2786394 - | putative cold shock protein CMM_2472 2786936 - 2787205 + | hypothetical protein CMM_2473 2787216 - 2789102 + | hypothetical protein CMM_2474 2789099 - 2790763 + | putative ATP-dependent DNA helicase CMM_2475 2790841 - 2791533 + | putative two component system response regulator CMM_2476 2791654 - 2793414 + | putative two-component system sensor kinase CMM_2477 2793461 - 2793751 + | hypothetical protein TERM 601 2793827 - 2793800 - T 93 -22 -3.23216 | opp_overlap 2793800 CCGGAGCACGACGAA GCGGGCGGCCCC CTGA GGGACCGCCCGC TTCTCCGTGCTGATC TERM 602 2793800 - 2793827 + T 91 -19.8 -3.38272 | opp_overlap 2793800 CCGGAGCACGACGAA GCGGGCGGCCCC CTGA GGGACCGCCCGC TTCTCCGTGCTGATC groEL 2795501 - 2793882 - | chaperonin GroEL TERM 603 2795362 - 2795376 + g 74 -11.4 -3.78934 | CCGTCGTTCGTGATG GTGGGG GCG CCCCAC TTCTTCTCGAGGACG cspA2 2795909 - 2795691 - | putative cold shock protein CMM_2480 2796702 - 2796130 - | hypothetical protein CMM_2481 2797066 - 2796737 - | hypothetical protein CMM_2482 2797303 - 2797704 + | putative methionine sulfoxide reductase CMM_2483 2797710 - 2798309 + | putative nitroreductase CMM_2484 2799356 - 2798439 - | hypothetical protein CMM_2485 2799672 - 2800772 + | putative sugar ABC transporter, ATP-binding protein TERM 604 2800788 - 2800846 + F 100 -31.8 -2.73124 | gap 1, overlap 2800789 TCGCGCCGATCCACC ACCGCTGCCGCGGTCCCC-ACGCTCCC CTCTCC GGGAGCGCCGGGGGCCGCGGCAGCGGC GTTTCCGCGGTCGGG TERM 605 2800789 - 2800847 + F 100 -23.3 -3.55563 | gap 3, overlap 2800788 CGCGCCGATCCACCA --CCGCTGCCGCGGTCCCC-ACGCTCCC CTCTCC GGGAGCGCCGGGGGCCGCGGCAGCGGCG TTTCCGCGGTCGGGT CMM_2486 2800874 - 2802178 + | hypothetical protein TERM 606 2802193 - 2802251 + T 93 -23.4 -2.75481 | gap 3 ACCGCCCTCCGCGCA G-G-G-CGCACGCACGAGGAGCCGGGACC CTGG GGTCCCGGCTCCTCCTGCGTGCGGTGCGC TACTTCCGCTTCGCG CMM_2487 2803321 - 2802251 - | putative tRNA/rRNA methyltransferase cysS 2804765 - 2803311 - | cysteinyl-tRNA synthetase ispDF 2806081 - 2804849 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CMM_2490 2806607 - 2806125 - | CarD family transcriptional regulator CMM_2491 2806771 - 2807337 + | hypothetical protein TERM 607 2807397 - 2807372 - T 87 -19.7 -3.21099 | opp_overlap 2807372 GCCTCGCACGACGAA GGCCCCGCCCC TCAC GGGACGGGGCC TTCGTCGTGCCGGCC TERM 608 2807372 - 2807397 + T 80 -17.5 -3.21099 | opp_overlap 2807372 GCCTCGCACGACGAA GGCCCCGCCCC TCAC GGGACGGGGCC TTCGTCGTGCCGGCC CMM_2492 2808103 - 2807423 - | putative two-component system response regulator CMM_2493 2809263 - 2808100 - | putative two-component system sensor kinase phoU 2809468 - 2810121 + | putative phosphate transport system regulator TERM 609 2810158 - 2810182 + T 90 -21.5 -2.83164 | opp_overlap 2810158 GCAGCGATGACGAGA GCCCGACCGGA TGA TCCGGTCGGGC TCTCGTCGTCCGTGC TERM 610 2810182 - 2810158 - T 90 -21.5 -2.83164 | opp_overlap 2810158 GCAGCGATGACGAGA GCCCGACCGGA TGA TCCGGTCGGGC TCTCGTCGTCCGTGC gpmA 2810961 - 2810206 - | phosphoglycerate mutase CMM_2496 2810997 - 2811809 + | hypothetical protein CMM_2497 2812927 - 2811806 - | hypothetical protein CMM_2498 2814065 - 2812911 - | putative aminomethyltransferase TERM 611 2813741 - 2813780 + g 70 -16.5 -2.64099 | gap 1, overlap 2813741 GGAGCCACGTGGTGA CGCCGTCGTCGAGCACGC CGACC GCGTGCTCGA-GGCGGCC GTTCTGGTCGAGGAA TERM 612 2813741 - 2813781 + g 79 -16.3 -3.40403 | overlap 2813741 GGAGCCACGTGGTGA CG-CCGTCGTCGAGCACGC CGACC GCGTGCTCGA-GGCGGCCG TTCTGGTCGAGGAAG CMM_2499 2814654 - 2814055 - | hypothetical protein CMM_2499A 2814782 - 2814666 - | hypothetical protein CMM_2500 2815092 - 2814826 - | hypothetical protein glnR 2815146 - 2815844 + | transcriptional regulator CMM_2502 2815807 - 2816727 + | putative acetyltransferase ppkA 2816821 - 2819004 + | polyphosphate kinase CMM_2504 2819046 - 2819987 + | putative NTP pyrophosphohydrolase pstS 2820187 - 2821284 + | phosphate ABC transporter, substrate-binding protein pstC 2821392 - 2822402 + | phosphate ABC transporter permease pstA 2822402 - 2823502 + | phosphate ABC transporter, permease component pstB 2823546 - 2824325 + | phosphate ABC transporter, ATP-binding component TERM 613 2824377 - 2824349 - T 100 -26.1 -3.78775 | opp_overlap 2824349 CCTCGGACGACGAAA GGCCCCCGCATCC CCA GGATGCGGGGGCC TTGCCTCTGCACGGG TERM 614 2824349 - 2824377 + T 100 -26.1 -3.12351 | opp_overlap 2824349 CCTCGGACGACGAAA GGCCCCCGCATCC CCA GGATGCGGGGGCC TTGCCTCTGCACGGG CMM_2509 2825270 - 2824407 - | hypothetical protein sigK 2825857 - 2825267 - | RNA polymerase sigma factor SigK CMM_2511 2827057 - 2826425 - | hypothetical protein CMM_2512 2828314 - 2827274 - | putative acyltransferase TERM 615 2828557 - 2828545 - H 77 -4.7 -4.61633 | overlap 2828546 ACACATGGGGAAAAA GCGCC GTC GGCGA AACAACACCGCCTGG CMM_2513 2828591 - 2829256 + | esterase CMM_2514 2830661 - 2829282 - | hypothetical protein CMM_2515 2830903 - 2831148 + | hypothetical protein CMM_2516 2832065 - 2831145 - | putative aldose-1-epimerase CMM_2517 2832903 - 2832076 - | DeoR family transcriptional regulator galT 2832997 - 2834139 + | hypothetical protein galK 2834136 - 2835296 + | hypothetical protein TERM 616 2835924 - 2835875 - g 72 -14.1 -3.31792 | gap 1 CCACTACGTGGAGAA CGCCCGGTTGCACG-CGGGCGCGA TCC CCACGCCGGCCGTGCTCCTGGGCG CCGAGCGCGTCGAGG CMM_2520 2835369 - 2835974 + | putative acetyltransferase/ siderophore binding protein folD 2836940 - 2836038 - | putative bifunctional methylenetetrahydrofolate dehydrogenase/ cyclohydrolase glyA 2838214 - 2836937 - | serine hydroxymethyltransferase CMM_2523 2838511 - 2840157 + | putative glycosidase CMM_2524 2840198 - 2840698 + | hypothetical protein CMM_2525 2841586 - 2840729 - | hypothetical protein CMM_2527 2844149 - 2843118 - | putative oxidoreductase CMM_2526 2841743 - 2843209 + | putative MFS permease sirR 2844268 - 2844942 + | hypothetical protein mntH 2846214 - 2844964 - | manganese transporter CMM_2530 2847263 - 2846343 - | hypothetical protein CMM_2531 2848626 - 2847322 - | putative sugar MFS-permease purU 2848705 - 2849577 + | putative formyltetrahydrofolate deformylase CMM_2533 2850462 - 2849608 - | putative ABC-transporter, permease component CMM_2534 2851523 - 2850459 - | hypothetical protein sbtB 2855336 - 2851656 - | serine protease TERM 617 2854005 - 2854035 + g 70 -14.7 -3.30124 | gap 1 GCCCGCGACCGTGCT CGCGGCGACCGTGG TGAT CCACGG-CGACGCG TTGTCGAGGGTCGAC sbtC 2859182 - 2855583 - | subtilisin-like serine protease,peptidase family S8 icdA 2860646 - 2859432 - | isocitrate dehydrogenase CMM_2538 2860890 - 2861333 + | hypothetical protein CMM_2539 2861337 - 2861657 + | putative methylated DNA-protein cysteine methyltransferase CMM_2540 2861712 - 2862218 + | hypothetical protein CMM_2541 2864103 - 2862295 - | putative ABC transporter, fused permease and ATP-binding protein CMM_2542 2865962 - 2864100 - | putative ABC transporter, fused permease and ATP-binding protein TERM 618 2865018 - 2865000 - G 70 -14.6 -3.25223 | CATCGACAGGAGGAA GCCGATCG ACT CGATCGGC CAGCGCAGCACGGCG TERM 619 2866487 - 2866452 - R 100 -30.6 -3.37354 | GAGACCCACGCACAA GAGCCCGGCCCGCATC CGAG GATGCGGGCCGGGCTC GAGTGGTGCGGTGCT ddaH 2867391 - 2866540 - | putative dimethylarginine dimethylaminohydrolase TERM 620 2868009 - 2867975 - R 89 -22.2 -2.52464 | opp_overlap 2867972 2867968, overlap 2867979 TCGGGTGTTAACGCA GAAAGGCCCGCCGCAC GAT GTGCGACGGGCCTCCC CGATCATTCTCAAGT TERM 621 2868005 - 2867979 - R 100 -21.6 -3.97368 | opp_overlap 2867972 2867968, overlap 2867975 GTGTTAACGCAGAAA GGCCCGCCGCAC GAT GTGCGACGGGCC TCCCCGATCATTCTC TERM 622 2869370 - 2869381 + r 74 -2.2 -4.7254 | CGTCTTGCGACTTAG CACG GACC TGTG TTTTTAGTAAACAGT TERM 623 2873841 - 2873829 - R 71 -6.2 -4.17316 | ACCCCCGCAAAACAA CCCG CATCC CGGG CGTGTCGCAACGGCC purH 2875530 - 2873905 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase purN 2876126 - 2875527 - | phosphoribosylglycinamide formyltransferase CMM_2546 2877410 - 2876130 - | hypothetical protein sucD 2878458 - 2877571 - | succinyl-CoA synthetase subunit alpha TERM 624 2877665 - 2877716 + g 87 -20 -3.05844 | opp_overlap 2877696 AGGGCCTCCTTCTTG CCCTGGGCCGTGCCGCTGCCGCCG GAGA CGATGGCGCCGGCGTGGCCCATGG TCTTGCCCTCGGGGG sucC 2879649 - 2878486 - | succinyl-CoA synthetase subunit beta TERM 625 2878962 - 2879011 + g 72 -14.7 -3.4072 | overlap 2878964 CCTCGAGCGGGTCGG CTGCGGCCGCGTCCTCGAGGGCC GCGT GGCCCTCGTGGCGGAGGCCGGCG TTCTCGTCGAGCGTG CMM_2549 2879897 - 2880718 + | hypothetical protein TERM 626 2881486 - 2881511 + G 77 -17.6 -3.01712 | GACCGGATCCGAGAC CGGCGCCGTC ACGCTC GACGGCGCCG TGTTCGACGACGGGA TERM 627 2882063 - 2882089 + G 76 -15 -3.31461 | opp_overlap 2882058, overlap 2882064 GGCGACTACACGTCG CCCGCCTGCCGG CTC CCGGCCGGCGGC TTCTACACCTGGGTG TERM 628 2882064 - 2882088 + G 76 -18.5 -2.58663 | opp_overlap 2882058, overlap 2882063 GCGACTACACGTCGC CCGCCTGCCGG CTC CCGGCCGGCGG CTTCTACACCTGGGT CMM_2550 2880821 - 2882821 + | hypothetical protein uvrD1 2885243 - 2882793 - | ATP-dependent DNA helicase glpQ1 2886401 - 2885343 - | hypothetical protein CMM_2553 2886534 - 2887337 + | hypothetical protein TERM 629 2887386 - 2887334 - T 82 -14.7 -3.61398 | opp_overlap 2887383, overlap 2887337 CCTGCGGGGCAACAA CTAGCACCACCGCCGGTCCGCGGCA CAG CACCGCGGACCGGCAGCGTGACGAA GGCCGCTCCCCTCGG TERM 630 2887383 - 2887337 - T 80 -18.6 -2.93073 | overlap 2887334 GCGGGGCAACAACTA GCACCACCGCCGGTCCGCGGCA CAG CACCGCGGACCGGCAGCGTGAC GAAGGCCGCTCCCCT TERM 631 2887383 - 2887414 + T 95 -26 -2.62184 | opp_overlap 2887334 2887387, overlap 2887387 GGACCGGCAGCGTGA CGAAGGCCGCTCCC CTCG GGGAGCGGCCTTCG TCATGTCAGCGCCGG TERM 632 2887410 - 2887387 - T 86 -19.6 -3.15544 | opp_overlap 2887383 2887387 CGGCAGCGTGACGAA GGCCGCTCCC CTCG GGGAGCGGCC TTCGTCATGTCAGCG TERM 633 2887387 - 2887410 + T 86 -19.6 -3.24747 | opp_overlap 2887387, overlap 2887383 CGGCAGCGTGACGAA GGCCGCTCCC CTCG GGGAGCGGCC TTCGTCATGTCAGCG guaA 2889026 - 2887446 - | bifunctional GMP synthase/glutamine amidotransferase protein CMM_2555 2889565 - 2889023 - | hypothetical protein CMM_2556 2890582 - 2889575 - | hypothetical protein napA 2892102 - 2890582 - | CPA2 family Na+/H+ antiporter TERM 634 2891298 - 2891281 - G 71 -8.3 -3.99374 | overlap 2891292 GTTGAGGAAGAAGAA CGCGCCG AACA CGTCGCG CAGCGGGATGGCGAT CMM_2558 2892639 - 2892106 - | hypothetical protein guaB1 2893859 - 2892741 - | inositol-5-monophosphate dehydrogenase CMM_2560 2894952 - 2893852 - | hypothetical protein guaB2 2896620 - 2895118 - | inosine-5'-monophosphate dehydrogenase TERM 635 2895966 - 2895931 - G 86 -16.8 -3.61398 | gap 1, opp_overlap 2895930 2895927 GGCGTCGCCGAAGAA GCCGATGGCCGCC-CCG ACA CGGAGGCGCCCCTCGGC GTCCTTCGTCGCGTC livH 2896858 - 2898318 + | branched-chain amino acid ABC transporter,permease protein livM 2898325 - 2899296 + | putative branched-chain amino acid ABC transporter, permease component livG 2899289 - 2900212 + | putatice branched-chain amino acid ABC transporter, ATPase component livF 2900209 - 2900967 + | putative branched-chain amino acid ABC transporter, ATPase component TERM 636 2900985 - 2901016 + T 93 -23.8 -2.62263 | opp_overlap 2900985 CCTCCTCGCACACGA CGACGCGGCATCCC TCCT GGGGTGCCGCGTCG TCGTGTGCGGGGCGT TERM 637 2901016 - 2900985 - T 88 -21.6 -2.62184 | opp_overlap 2900985 CCTCCTCGCACACGA CGACGCGGCATCCC TCCT GGGGTGCCGCGTCG TCGTGTGCGGGGCGT livK 2902582 - 2901299 - | putative branched-chain amino acid ABC transporter, substrate-binding protein CMM_2567 2903714 - 2902761 - | permease DMT family TERM 638 2903156 - 2903196 + g 79 -14.6 -3.61398 | gap 1 GCCAGGCCGTCTCGA GCGCGAG-GCCGGAGAGCG CGTC CGCTCCCCCGCTCACGCGC TTCTTCACCAGCCCG TERM 639 2903826 - 2903802 - R 79 -18.6 -2.80816 | CCCGGACGCACGAGA GCCCGGCCGA ACGTG TCGGCCGGGC TCCCGGGTGAAGCGG groES 2904171 - 2903875 - | co-chaperonin GroES CMM_2569 2904316 - 2905518 + | putative SAM-dependant methyltransferase TERM 640 2905552 - 2905585 + T 95 -26.1 -2.79302 | gap 1 CTGCCCCGGACGCGA CGACGCGGCCG-CCCC CGA GGGGACGGCCGCGTCG TGTCGTGCGGGTGGT CMM_2570 2906029 - 2905604 - | hypothetical protein CMM_2571 2907753 - 2906134 - | putative acetyltransferase/glycoprotease fusion protein CMM_2572 2908367 - 2907750 - | hypothetical protein alrA2 2910077 - 2908377 - | putative alanine racemase alrA1 2911231 - 2910074 - | putative alanine racemase acpS 2911587 - 2911228 - | 4'-phosphopantetheinyl transferase glmS 2913448 - 2911598 - | D-fructose-6-phosphate amidotransferase coaA 2913597 - 2914556 + | pantothenate kinase CMM_2578 2915903 - 2914590 - | putative phospho-sugar mutase TERM 641 2915801 - 2915763 - G 87 -19.7 -3.14132 | gap 2 GGCCGCCGCGATGAA CTCG-CC-GGACACCCGGG GAT CCCGGGCGTCCTGGCCGAG CACGTGCGCGGCGGC rpsI 2916412 - 2915927 - | 30S ribosomal protein S9 TERM 642 2915995 - 2916038 + g 73 -10.3 -3.85864 | gap 1, opp_overlap 2916014, overlap 2915996 2916003 TGCGCTCCTTGACGC GCGCGTCGCGGCTGAGGAAG CCGTT CTTCTTCAGCA-CGGCGCGG TTGTTCTCCTCGTCG rplM 2916909 - 2916463 - | 50S ribosomal protein L13 truA 2918065 - 2917061 - | putative tRNA pseudouridine synthase CMM_2582 2919132 - 2918062 - | putative acetyltransferase TERM 643 2919235 - 2919209 - R 72 -16.5 -2.80816 | opp_overlap 2919209 GCCGGACGCACGAGA GCCCCCGACGC GCAGG GCGGCGGGGGC TCTCGTGATGGTGCG TERM 644 2919209 - 2919235 + r 72 -16.5 -2.83715 | opp_overlap 2919209 GCCGGACGCACGAGA GCCCCCGACGC GCAGG GCGGCGGGGGC TCTCGTGATGGTGCG rplQ 2919820 - 2919257 - | 50S ribosomal protein L17 rpoA 2920868 - 2919873 - | DNA-directed RNA polymerase subunit alpha TERM 645 2921024 - 2920966 - R 84 -19 -2.89564 | gap 3, overlap 2920949 GGTCGATCGGACACA CGGCGGATCGGCCGACGCCGTCCC-CTCC TGGT GGAGCGGGACGGCAGCGGCCGATCAGC-- GCGAGCTAGACGCGG rpsK 2921428 - 2921030 - | 30S ribosomal protein S11 rpsM 2921847 - 2921473 - | 30S ribosomal protein S13 rpmJ 2922114 - 2922001 - | 50S ribosomal protein L36 infA 2922408 - 2922187 - | translation initiation factor IF-1 TERM 646 2922586 - 2922632 + r 82 -18.7 -2.62983 | gap 1 GGATTCTGCGCTAGC GGACGCACGACGGGCCGGACGG TCGC CCGTCCGGCCCGT-GCCCGTGC TGCTGTCGCCGTGCC mtlD 2923819 - 2922650 - | mannitol-1-phosphate 5-dehydrogenase mtlF 2924253 - 2923816 - | putative PTS system mannitol-specific IIA component mtlA 2925890 - 2924361 - | putative PTS system mannitol-specific IIBC component CMM_2592 2927673 - 2926003 - | phosphoenolpyruvate-protein phosphotransferase,PTS enzyme I CMM_2593 2927936 - 2927670 - | hypothetical protein CMM_2594 2928415 - 2928035 - | putative PTS system cellobiose-specific IIB component CMM_2595 2928627 - 2930615 + | transcription antiterminator mapA2 2931504 - 2930668 - | putative methionine aminopeptidase adk 2932111 - 2931509 - | adenylate kinase TERM 647 2931911 - 2931869 - G 77 -16.4 -3.21099 | gap 3, opp_overlap 2931867 2931866 GCCGTCGAGCAGGAA GCCCG-C-CCGCGCGTCCTCC TCCT GGAGG-CGCGCGGTGACGAGC CGGTTGGTGAGCTCG secY 2933430 - 2932108 - | preprotein translocase subunit SecY TERM 648 2933505 - 2933540 + r 100 -28.4 -3.09834 | overlap 2933481 TGCGGCCCCAGGTGC CGGTAGGGGCGGTCGG TTGC CCGACCGCCCCTGCCG TTGCGTCCTGAAGTG rplO 2934134 - 2933556 - | 50S ribosomal protein L15 rpmD 2934316 - 2934134 - | 50S ribosomal protein L30 rpsE 2934981 - 2934316 - | 30S ribosomal protein S5 rplR 2935388 - 2935017 - | 50S ribosomal protein L18 TERM 649 2935333 - 2935363 + g 87 -6.6 -4.81551 | overlap 2935337 TTCTTGCGCAGGCGT GCGTGCCTGCGGCC GCG GGCGGCGGACTTGC TTTTTCCTCTAACTC rplF 2935927 - 2935391 - | 50S ribosomal protein L6 rpsH 2936330 - 2935932 - | 30S ribosomal protein S8 rplE 2937064 - 2936468 - | 50S ribosomal protein L5 rplX 2937426 - 2937067 - | 50S ribosomal protein L24 rplN 2937797 - 2937429 - | 50S ribosomal protein L14 rpsQ 2938121 - 2937825 - | 30S ribosomal protein S17 TERM 650 2938049 - 2938098 + g 71 -8.3 -3.9644 | CGCTGGTGACGTACC CACGGCGGGACTTGCGGTAGCCG CGGT CGGCCGTCGCGGTGTCAGCCGTG TTCTTCTCTTCGGCG rpmC 2938450 - 2938124 - | 50S ribosomal protein L29 rplP 2938869 - 2938450 - | 50S ribosomal protein L16 rpsC 2939669 - 2938872 - | 30S ribosomal protein S3 rplV 2940061 - 2939669 - | 50S ribosomal protein L22 rpsS 2940368 - 2940087 - | 30S ribosomal protein S19 TERM 651 2940294 - 2940348 + g 72 -11.5 -3.63694 | opp_overlap 2940314, overlap 2940294 CACGTTCTTGCTGCT GGCCTCGTTCGCCGA-GATCACCTTGC GGA GCA-GGTGGTCGTCGACGAAGGGGCCC TTCTTCAGACTGCGT rplB 2941220 - 2940381 - | 50S ribosomal protein L2 rplW 2941542 - 2941243 - | 50S ribosomal protein L23 rplD 2942195 - 2941539 - | 50S ribosomal protein L4 rplC 2942851 - 2942198 - | 50S ribosomal protein L3 rpsJ 2943168 - 2942860 - | 30S ribosomal protein S10 TERM 652 2942928 - 2942956 + g 76 -15.3 -3.35996 | AGTCGACCGCCTTCG GCGTCGGGTCGAC GAT GTCGATCAGACGC TTGTGCGTGCGCATC CMM_2619 2944577 - 2943609 - | putative topoisomerase IB tufA 2945920 - 2944727 - | elongation factor Tu TERM 653 2945936 - 2945989 + r 77 -14.6 -3.48036 | gap 2, overlap 2945926 2945945 TGTGGGTCCTCCTCA GGACTC-GGT-TGCGGGGCGTCCGGG TGTT CCCGGACGCCCCGCGTGTTGGAGATC TTGCTTATGGTACTG TERM 654 2945945 - 2945978 + r 100 -27.5 -3.06315 | overlap 2945936 TCCTCAGGACTCGGT TGCGGGGCGTCCGGG TGTT CCCGGACGCCCCGCG TGTTGGAGATCTTGC fusA 2948148 - 2946034 - | elongation factor G TERM 655 2947045 - 2947078 + g 86 -16.1 -3.68936 | CGGGTTCTCCTTGTT GGAGTGCATCTGGAA GATC TTCCCGATGCGCTCC TTCTTGCCCTTGGTC rpsG 2948666 - 2948196 - | 30S ribosomal protein S7 rpsL 2949040 - 2948666 - | 30S ribosomal protein S12 CMM_2624 2949731 - 2949306 - | hypothetical protein CMM_2625 2950743 - 2949751 - | hypothetical protein CMM_2626 2951656 - 2950817 - | putative polar amino acid ABC transporter, ATP-binding protein CMM_2627 2952308 - 2951643 - | putative polar amino acid ABC transporter,permease component CMM_2628 2953201 - 2952353 - | putative polar amino acid ABC transporter,substrate-binding protein CMM_2629 2953895 - 2953410 - | hypothetical protein TERM 656 2954047 - 2954026 - R 86 -18.7 -3.21099 | opp_overlap 2954026 2954028 CCCGGGGACGAGGAA GGGCCCCGC CGGA GCGGGGCCC TTCTCATCGTGCGCT TERM 657 2954026 - 2954047 + r 93 -18.7 -3.44229 | opp_overlap 2954026, overlap 2954028 CCCGGGGACGAGGAA GGGCCCCGC CGGA GCGGGGCCC TTCTCATCGTGCGCT rpoC 2957977 - 2954078 - | DNA-directed RNA polymerase subunit beta' rpoB 2961514 - 2958026 - | DNA-directed RNA polymerase subunit beta CMM_2632 2961820 - 2962488 + | putative Zn-dependant hydrolase CMM_2633 2962541 - 2963398 + | hypothetical protein CMM_2634 2963439 - 2964623 + | hypothetical protein CMM_2635 2964688 - 2965164 + | hypothetical protein CMM_2636 2965201 - 2965713 + | hypothetical protein CMM_2637 2965710 - 2966387 + | hypothetical protein CMM_2638 2966718 - 2966416 - | hypothetical protein CMM_2639 2967422 - 2966832 - | hypothetical protein CMM_2640 2967906 - 2967406 - | hypothetical protein CMM_2641 2967976 - 2968512 + | hypothetical protein CMM_2642 2969041 - 2968514 - | hypothetical protein CMM_2643 2969091 - 2969738 + | hypothetical protein CMM_2644 2969846 - 2971516 + | putative ATP-dependent helicase TERM 658 2971583 - 2971550 - f 79 -18.1 -2.78384 | CGCGCCGGCATGACA TCGAGGGCCCCCGTC CACG GACGGGGGCCCTCCG TCGTCCCCGGAGGGA CMM_2645 2971696 - 2972319 + | TetR family transcriptional regulator CMM_2646 2972944 - 2972390 - | hypothetical protein CMM_2647 2973111 - 2973752 + | putative phospholipase/carboxylesterase TERM 659 2976940 - 2976979 + G 95 -23.6 -3.14344 | GAGCCGGCTGCGCGA CGCCCTCGGCGTGCCGCT GCCC ATCGGCACGCCGATGGCG TTCGTCGAGCCCGTG CMM_2648 2973833 - 2978653 + | putative ATP-dependent helicase CMM_2649 2978681 - 2979484 + | putative endonuclease VIII/DNA glycosylase CMM_2650 2981135 - 2979603 - | cationic amino acid permease APC family sigF 2981390 - 2982397 + | putative RNA polymerase sigma factor, SigF-homolog (stress response/stationary phase sigma factor) CMM_2652 2983068 - 2982466 - | putative two-component system, sensor kinase/response regulator hybrid protein TERM 660 2983258 - 2983216 - R 70 -12.5 -3.40403 | overlap 2983220 CGTCTGGGACGAGAA CTCACGGGGAGCCGTTCGC GAGCG ACGCCCGGCCCCCCGCGGG CCCACCGCGCGGGCC CMM_2653 2984091 - 2983279 - | hypothetical protein CMM_2654 2984215 - 2984622 + | hypothetical protein CMM_2655 2984687 - 2984869 + | putative transcriptional regulator TERM 661 2984914 - 2984863 - f 90 -21.5 -2.70932 | gap 1 CGTCTTCCCCAAGCA GCGCTGACCG-GCCCGGGTCGCCG CGCGC CGGCGACCCGGGATCGTCCCGCGC CGGAAACGCTCCCGC CMM_2656 2984985 - 2986892 + | putative amidase CMM_2657 2988430 - 2986913 - | putative phosphatase CMM_2658 2989901 - 2988519 - | putative penicillin-binding protein CMM_2659 2990410 - 2989898 - | MarR family transcriptional regulator CMM_2660 2990469 - 2991677 + | putative monooxygenase CMM_2661 2991847 - 2992254 + | hypothetical protein TERM 662 2992276 - 2992305 + T 86 -20.7 -2.79796 | CCCCCGCACGCACGA GCGGCCGCCGACC CGAG GGTCGCCGGCCGC TCTCGTGCGGTGGGA CMM_2662 2992926 - 2992321 - | putative nitroreductase CMM_2663 2994182 - 2993046 - | putative oxidoreductase CMM_2664 2994910 - 2994179 - | hypothetical protein CMM_2665 2995087 - 2995941 + | hypothetical protein CMM_2666 2997852 - 2995954 - | putative multidrug ABC transporter, fused permease and ATP-binding protein CMM_2667 2998206 - 2999030 + | hypothetical protein CMM_2668 2999423 - 2999145 - | hypothetical protein TERM 663 2999535 - 2999498 - H 75 -15.5 -3.36289 | GATGACCTCAATCAA CCACCCTGCGGGGTGTG GCGG CACACCCCTGGGGGTGG GATGGTGGATCCATG CMM_2669 2999548 - 3000216 + | putative two-component system response regulator TERM 664 3000310 - 3000338 + T 76 -16 -3.23395 | TCGAACGGTGCGGCT TCGCCGCTCGCC TCACC GGCGAGCTGCGA TTCCTGGTCCTCCAT CMM_2670 3001199 - 3000417 - | putative cell filamentation protein TERM 665 3001178 - 3001146 - G 82 -18.6 -3.09273 | GTTCCTCAATACAGA CGTACCCGGGATGA AGTAG TCATCCCAGGTACG GAACGTCGAACGGCG CMM_2671 3001405 - 3001199 - | hypothetical protein CMM_2672 3001534 - 3002652 + | antibiotic immunity protein peptidase family S66 protein TERM 666 3002716 - 3002750 + F 74 -2.2 -4.62783 | gap 1, opp_overlap 3002716 CAAACAAGAATTAAA TGACGC-AATTCCGG CTCAAA CAAGAATTTGCGTCA TTTTTCGCCTCCATA TERM 667 3003007 - 3002973 - f 70 -2.7 -4.58395 | gap 1 TCGACGTGTCAAAAA CGCCTTCGAGGTCTTC AAGT GCTGGCC-CAAAGGCG AGACGGATACATACC CMM_2673 3003259 - 3004305 + | hypothetical protein CMM_2674 3005382 - 3004315 - | putative glycosyl transferase CMM_2675 3006115 - 3005450 - | hypothetical protein TERM 668 3005750 - 3005693 - G 70 -14 -3.2794 | gap 1, overlap 3005696 CGGGATGGAGATGAA CGAGCGCACGAGCGGCACGCACCGCCC GAGGA GCACGGCG-GTGCCGCCCCAGCGCTGG AAGAACGCCTCGGCC blaC 3006326 - 3007294 + | putative beta-lactamase CMM_2677 3007954 - 3007331 - | TetR family transcriptional regulator CMM_2678 3008020 - 3008658 + | putative acetyltransferase CMM_2679 3008937 - 3008701 - | hypothetical protein CMM_2680 3008983 - 3009453 + | MarR family transcriptional regulator CMM_2681 3009517 - 3010362 + | putative hydrolase CMM_2682 3010356 - 3011033 + | hypothetical protein CMM_2683 3011123 - 3012706 + | putative bifunctional phosphatase/glycosyl transferase CMM_2684 3012715 - 3013755 + | putative glycosyl transferase CMM_2685 3013752 - 3015701 + | putative bifunctional glycosyl transferase/isomerase CMM_2686 3015698 - 3017101 + | putative bifunctional ADP-heptose synthase/transferase CMM_2687 3017174 - 3017878 + | putative short-chain dehydrogenase/oxidoreductase TERM 669 3017946 - 3017912 - T 84 -19.2 -2.78384 | opp_overlap 3017915, overlap 3017915 CCTGCGCGCATGAGA CGAGCCCGGCCCCGCA TCG CGCGGGGCCGGGCTTT TCTCGTCGCTCAACC TERM 670 3017943 - 3017915 - T 95 -25.3 -2.66316 | opp_overlap 3017915, overlap 3017912 GCGCGCATGAGACGA GCCCGGCCCCGCA TCG CGCGGGGCCGGGC TTTTCTCGTCGCTCA TERM 671 3017915 - 3017943 + T 100 -24.6 -4.4767 | opp_overlap 3017912 3017915 GCGCGCATGAGACGA GCCCGGCCCCGC ATCGC GCGGGGCCGGGC TTTTCTCGTCGCTCA CMM_2688 3019062 - 3018382 - | hypothetical protein TERM 672 3019675 - 3019635 - R 75 -13.1 -3.64703 | opp_overlap 3019638 3019641, overlap 3019639 3019641 CGCCCTCGATCGAAA GCAATAGCCCGGCCCAGCA TCA CGCGGGGCCGGGCTCGTGT GCTCTCGAGGGTCAG TERM 673 3019671 - 3019639 - R 85 -16.9 -3.54408 | opp_overlap 3019638 3019641, overlap 3019635 3019641 CTCGATCGAAAGCAA TAGCCCGGCCCAGCA TCA CGCGGGGCCGGGCTC GTGTGCTCTCGAGGG TERM 674 3019641 - 3019669 + r 82 -18.8 -2.68434 | opp_overlap 3019641 3019639 3019635, overlap 3019638 CGATCGAAAGCAATA GCCCGGCCCAGC ATCAC GCGGGGCCGGGC TCGTGTGCTCTCGAG TERM 675 3019669 - 3019641 - R 91 -19.5 -3.34609 | opp_overlap 3019638 3019641, overlap 3019639 3019635 CGATCGAAAGCAATA GCCCGGCCCAGCA TCA CGCGGGGCCGGGC TCGTGTGCTCTCGAG CMM_2689 3020064 - 3019687 - | hypothetical protein CMM_2690 3020768 - 3020157 - | hypothetical protein CMM_2691 3020952 - 3021953 + | putative endoglucanase CMM_2692 3022066 - 3023475 + | putative endoglucanase CMM_2693 3023600 - 3024913 + | hypothetical protein CMM_2694 3025105 - 3026142 + | hypothetical protein CMM_2695 3027400 - 3026264 - | hypothetical protein TERM 676 3026524 - 3026498 - G 73 -5 -4.4078 | opp_overlap 3026518 3026520, overlap 3026500 3026501 GTTGCCGAACCAAAA GACGCCGACG GTGCGCG CGCCGACGGC CTGCGCGAGGTGGCG CMM_2696 3028577 - 3027486 - | hypothetical protein CMM_2697 3028654 - 3029595 + | putative sugar ABC transporter, permease component CMM_2698 3029598 - 3030548 + | putative sugar ABC transporter, permease component CMM_2699 3030610 - 3031965 + | putative sugar ABC transporter, substrate-binding protein bgaB 3032047 - 3033846 + | putative beta-galactosidase CMM_2701 3033952 - 3035502 + | hypothetical protein CMM_2702 3035499 - 3037055 + | putative bifunctional sugar kinase/nucleotidyltransferase TERM 677 3037255 - 3037225 - g 75 -13.2 -3.63515 | CGCGATCGTGAAGAA GGCGGAGGAGTCGG GCG CCGACTCCGACACC CTCGACGCGCTCCGC CMM_2703 3037145 - 3037336 + | hypothetical protein TERM 678 3037348 - 3037394 + T 100 -28.1 -3.28712 | overlap 3037349 CTGATCAGCCCCATC AGGCCGACGGCCCCGATCCTC CTCGC GAGGATCGGGGCCGTCCGCCG TTCTGGGCACGCGGA TERM 679 3037349 - 3037393 + T 100 -31.6 -2.57132 | overlap 3037348 TGATCAGCCCCATCA GGCCGACGGCCCCGATCCTC CTCGC GAGGATCGGGGCCGTCCGCC GTTCTGGGCACGCGG CMM_2704 3037766 - 3037437 - | hypothetical protein CMM_2705 3038021 - 3038533 + | hypothetical protein CMM_2706 3039546 - 3038530 - | hypothetical protein CMM_2707 3040071 - 3039550 - | hypothetical protein CMM_2708 3040732 - 3040244 - | hypothetical protein CMM_2709 3041967 - 3040792 - | M23 family metallopeptidase CMM_2710 3042524 - 3041964 - | hypothetical protein CMM_2711 3043921 - 3042524 - | hypothetical protein CMM_2712 3044186 - 3044797 + | hypothetical protein CMM_2713 3044822 - 3045145 + | hypothetical protein CMM_2714 3045207 - 3045968 + | hypothetical protein CMM_2715 3045970 - 3047523 + | hypothetical protein CMM_2716 3047536 - 3049044 + | hypothetical protein CMM_2717 3049099 - 3050808 + | hypothetical protein CMM_2718 3050805 - 3052583 + | putative traG-family protein CMM_2719 3052580 - 3052966 + | hypothetical protein CMM_2720 3052963 - 3053808 + | hypothetical protein CMM_2721 3055084 - 3053831 - | putative protein phosphatase CMM_2722 3056566 - 3055238 - | putative serine phosphatase CMM_2723 3056988 - 3056566 - | hypothetical protein CMM_2724 3057319 - 3056981 - | hypothetical protein TERM 680 3057482 - 3057457 - H 70 -9.7 -3.72893 | overlap 3057459 CATCGTCCGAGGAAA TACGATGGGTC CGGC GACCCGTCGCA TGTCCGCGCGGCGCA CMM_2725 3057585 - 3057953 + | hypothetical protein CMM_2726 3058576 - 3057950 - | phosphoglycerate mutase CMM_2727 3058730 - 3059692 + | hypothetical protein CMM_2728 3060149 - 3059727 - | putative acetyltransferase CMM_2729 3060249 - 3061322 + | hypothetical protein CMM_2730 3061491 - 3062450 + | putative sugar ABC transporter, permease component CMM_2731 3062450 - 3063445 + | putative sugar ABC transporter, permease component CMM_2732 3063796 - 3063473 - | exporter DMT family membrane protein CMM_2733 3065281 - 3063923 - | putative sugar ABC transporter, substrate binding protein CMM_2734 3066292 - 3065381 - | putative esterase glpX 3067291 - 3066305 - | fructose 1,6-bisphosphatase II CMM_2736 3068483 - 3067350 - | AI-E2 family membrane protein CMM_2737 3069394 - 3068672 - | putative peptide ABC transporter, ATP-binding protein CMM_2738 3070488 - 3069391 - | putative peptide ABC transporter, permease component CMM_2739 3070638 - 3071813 + | putative two component system, sensor kinase CMM_2740 3071814 - 3072434 + | putative two-component system, response regulator TERM 681 3072495 - 3072474 - T 86 -18.7 -3.21099 | CCCGCGCACGACGAA GGGCCCCGG TCTC CCGGGGCCC TTCGCGTGGATCGGC CMM_2741 3073270 - 3072689 - | hypothetical protein CMM_2742 3073439 - 3074080 + | putative hydrolase CMM_2743 3074864 - 3074136 - | hypothetical protein CMM_2744 3075628 - 3074915 - | hypothetical protein CMM_2745 3076020 - 3076745 + | putative F420-dependent NADP reductase CMM_2746 3076755 - 3077555 + | membrane protein, putative permease CMM_2747 3077633 - 3077902 + | Cro/CI family transcriptional regulator CMM_2748 3077895 - 3079214 + | hypothetical protein CMM_2749 3079341 - 3079994 + | hypothetical protein CMM_2750 3080032 - 3080556 + | hypothetical protein kdpA 3080942 - 3082618 + | potassium-transporting ATPase subunit A TERM 682 3084336 - 3084279 - g 82 -19.2 -3.16564 | gap 2, overlap 3084324 CGGCGACGGCACCAA CGACGCGCCCGCGCTC-GCGC-AGGCCG ACGT CGGCGTCGCGATGAACACGGGCACGTCG GCCGCGAAGGAGGCC kdpB 3082615 - 3084765 + | putative potassium-transporting ATPase B chain,P-type ATPase kdpC 3084808 - 3085416 + | putative potassium-transporting ATPase C chain,P-type ATPase kdpD 3085448 - 3087994 + | putative two-component system, sensor kinase kdpE 3087991 - 3088695 + | putative two-component system, response regulator CMM_2756 3088749 - 3089528 + | putative esterase/lipase CMM_2757 3089570 - 3089929 + | hypothetical protein CMM_2758 3090152 - 3089943 - | hypothetical protein CMM_2759 3090292 - 3091683 + | DNA repair protein RadA CMM_2760 3092037 - 3091723 - | ArsR family transcriptional regulator TERM 683 3092119 - 3092085 - R 93 -23.7 -2.62184 | gap 1 CCGGGCGGGAGACGA CGACGGGGACCGGGCC TCAT GGCCCGGTCCCCGT-G TCGATCCTCGCGCGT CMM_2761 3092307 - 3092149 - | hypothetical protein CMM_2762 3093090 - 3092425 - | hypothetical protein CMM_2763 3093711 - 3093169 - | N-acetylglutamate synthase CMM_2764 3094035 - 3093763 - | hypothetical protein CMM_2765 3095713 - 3094037 - | putative two-component system, sensor kinase CMM_2766 3096483 - 3095710 - | putative two-component system, response regulator CMM_2767 3097384 - 3096554 - | hypothetical protein TERM 684 3097469 - 3097509 + r 75 -16.2 -3.01074 | overlap 3097466 CCTAGTGCTTGTCCT CCGTCGCGCGCGT-GACGGT CTC GCCGTCGACGCTCGCG-CGG TCCTTCTTCTGCTTG CMM_2768 3098483 - 3097455 - | membrane protein, putative exporter CMM_2769 3099606 - 3098668 - | hypothetical protein CMM_2770 3100676 - 3099603 - | hypothetical protein CMM_2771 3101581 - 3100799 - | putative multidrug ABC transporter, permease component CMM_2772 3102534 - 3101578 - | putative ABC transporter, ATP-binding protein TERM 685 3102488 - 3102463 - G 70 -12.6 -3.35679 | gap 1 CGGCGCGAGGGAGAA GGACGCG-GCG TCGAG CGCGCGCGTCC GGCCGAAGGCGCGGG CMM_2773 3103495 - 3102527 - | putative nitroreductase CMM_2774 3104816 - 3103554 - | hypothetical protein CMM_2775 3105724 - 3104813 - | hypothetical protein TERM 686 3105690 - 3105637 - G 86 -22.6 -2.64616 | gap 2 GCTTCAGGGAGACCA GCTCGCGACCGCCGAGGAGGTGGAGG GTGT CCTCCACCTCCCCGACGG-CGT-AGC GGGGACTCACCGAGT CMM_2776 3105947 - 3105735 - | hypothetical protein CMM_2777 3106119 - 3106781 + | hypothetical protein CMM_2778 3106979 - 3108031 + | putative zinc-dependant oxidoreductase CMM_2779 3109407 - 3108196 - | putative carboxylesterase CMM_2780 3110396 - 3109404 - | hypothetical protein TERM 687 3109542 - 3109494 - G 84 -21 -2.77899 | gap 1, overlap 3109491 GCGGCCGACGAACGA GCCGTCCGCGCCGGCG-TCCTCG AAGC CGAGGAGCGCCGGACCCGACGGC GTCCGGACGATGCGC CMM_2781 3111220 - 3110396 - | putative sugar ABC transporter, permease component CMM_2782 3112212 - 3111217 - | putative sugar ABC transporter, permease component CMM_2783 3113558 - 3112209 - | putative sugar ABC transporter, substrate binding protein CMM_2784 3113760 - 3114845 + | LacI family transcriptional regulator CMM_2785 3115467 - 3114871 - | putative acetyltransferase TERM 688 3115533 - 3115504 - R 84 -19.3 -2.70932 | opp_overlap 3115505 3115509, overlap 3115509 GCGGCCCGGGAACGA CGGAAGGGCCCGC CGAG GCGGGCCCTTCCT GTGCTGCTGGTCGTG TERM 689 3115505 - 3115532 + r 90 -22.8 -2.83894 | opp_overlap 3115504 3115509, overlap 3115509 CGGCCCGGGAACGAC GGAAGGGCCCGC CGAG GCGGGCCCTTCC TGTGCTGCTGGTCGT TERM 690 3115509 - 3115528 + r 79 -16.4 -3.30443 | opp_overlap 3115504 3115509, overlap 3115505 CCGGGAACGACGGAA GGGCCCGC CGAG GCGGGCCC TTCCTGTGCTGCTGG TERM 691 3115528 - 3115509 - R 75 -16.4 -3.13164 | opp_overlap 3115509 3115505, overlap 3115504 CCGGGAACGACGGAA GGGCCCGC CGAG GCGGGCCC TTCCTGTGCTGCTGG rplA 3116258 - 3115572 - | 50S ribosomal protein L1 rplK 3116789 - 3116358 - | 50S ribosomal protein L11 nusG 3117865 - 3116843 - | putative transcription antitermination protein secE 3118325 - 3118053 - | preprotein translocase subunit SecE aspC 3118661 - 3119890 + | aspartate aminotransferase murB 3121078 - 3119924 - | UDP-N-acetylenolpyruvoylglucosamine reductase CMM_2792 3121520 - 3121086 - | putative dehydratase CMM_2793 3121966 - 3121517 - | hypothetical protein CMM_2794 3122222 - 3122136 - | hypothetical protein CMM_2795 3122789 - 3122592 - | hypothetical protein TERM 692 3122944 - 3122912 - R 90 -15.7 -3.83026 | gap 1 GGCCGGCAGAGGAAA GGCCCCGGA-ACCT GGCGAG AGGTGTCCGGGGCC TATCGAGGAGGACGG TERM 693 3123260 - 3123216 - R 70 -15.1 -2.85378 | gap 2, overlap 3123219 3123240 AACCATACGACGATA GCAGGTCCGGGACCGCTCACG AGACG CGTGA-CGG-CCCGGACCCTC GCACGTCCGGCCGGG TERM 694 3123257 - 3123219 - R 75 -17.6 -2.67992 | gap 2, overlap 3123216 3123240 CATACGACGATAGCA GGTCCGGGACCGCTCACG AGACG CGTGA-CGG-CCCGGACC CTCGCACGTCCGGCC CMM_2796 3124224 - 3123286 - | putative oxidoreductase aglC 3124385 - 3126124 + | alpha-glucosidase TERM 695 3126175 - 3126142 - T 100 -29.7 -2.62184 | CCGCCGCGGACACGA CGACGCCCCCTCGCC TTCG GGCGAGGGGGCGTCG TCGTGCGGGCGCAGC CMM_2798 3127389 - 3126205 - | M23 family membrane bound metalloendopeptidase suhB 3128424 - 3127615 - | putative inositol-1-monophosphatase CMM_2800 3129210 - 3128470 - | hypothetical protein CMM_2801 3130259 - 3129273 - | putative oxidoreductase TERM 696 3130363 - 3130342 - H 70 -14.4 -3.25823 | GGCGGGGCAGACGAA CGGCCCCG TGCGAG CGGGGCCG TCCAGTGGGTGGCGA CMM_2802 3130585 - 3131073 + | hypothetical protein CMM_2803 3131155 - 3132624 + | putative phospholipase, cardiolipin synthetase CMM_2804 3133146 - 3132652 - | MarR family transcriptional regulator CMM_2805 3133954 - 3133271 - | hypothetical protein CMM_2806 3135462 - 3134092 - | putative ferredoxin/ferredoxin-NADP reductase menX 3136626 - 3135553 - | putative polyprenyl diphosphate synthase menH 3137396 - 3136662 - | putative menaquinone biosynthesis methyltransferase CMM_2809 3140142 - 3137404 - | putative sugar MFS permease menF 3137557 - 3138831 + | putative isochorismate synthase CMM_2811 3140684 - 3140139 - | hypothetical protein menD 3142566 - 3140800 - | menaquinone biosynthesis bifunctional protein menD CMM_2813 3142995 - 3142573 - | hypothetical protein CMM_2814 3143135 - 3143515 + | hypothetical protein CMM_2815 3143903 - 3143526 - | hypothetical protein menA 3144793 - 3143909 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase CMM_2817 3145704 - 3144952 - | putative mutase CMM_2818 3146711 - 3145803 - | hypothetical protein CMM_2819 3148716 - 3146734 - | metallopeptidase family M13 CMM_2820 3148824 - 3149030 + | Cro/CI family transcriptional regulator CMM_2821 3149014 - 3149415 + | hypothetical protein CMM_2822 3149521 - 3150804 + | xanthine/uracil family permease TERM 697 3150806 - 3150845 + F 84 -19.3 -2.79796 | gap 2 GCGGGACCGCCTGAC CGCG--CGGCGGCCCTCCG CTCA CGGCGGGCCGCCGACCGCG TGTCCTAGCATCGCG CMM_2823 3150990 - 3152369 + | hypothetical protein CMM_2824 3154141 - 3152348 - | amidase CMM_2825 3154869 - 3154138 - | hypothetical protein CMM_2826 3156242 - 3154866 - | cytosine permease CMM_2827 3156391 - 3157080 + | GntR family transcriptional regulator CMM_2828 3157799 - 3157101 - | putative phosphatase TERM 698 3157441 - 3157386 - G 71 -10.5 -3.82084 | gap 4, overlap 3157383 GCCGAACACGAAGAA CCGGC-CGA-GGCGGGCG-GGCTC-CA TCTTGG TGCGGGCCGCGCCCTCCATCGCGCCGG AGACGACGCCGAGCA CMM_2829 3158350 - 3157838 - | hypothetical protein mmuM 3158485 - 3159390 + | homocysteine methyltransferase CMM_2831 3160339 - 3159476 - | putative nucleoside-diphosphate-sugar epimerase CMM_2832 3160454 - 3160834 + | putative transcriptional regulator CMM_2833 3160911 - 3162206 + | putative MFS permease CMM_2834 3162309 - 3163175 + | putative oxidoreductase CMM_2835 3164138 - 3163203 - | LysR family transcriptional regulator CMM_2836 3164228 - 3165205 + | permease DMT family CMM_2837 3165202 - 3165591 + | hypothetical protein CMM_2838 3165588 - 3165944 + | hypothetical protein CMM_2839 3166843 - 3165974 - | putative nucleoside-diphosphate-sugar epimerase TERM 699 3166961 - 3166986 + r 75 -16.1 -3.10677 | overlap 3166951 CCTGCTCGAGCACCG CCGCCGAGGGG ATGT CCGCTCGGCGG TTCGATCGATTCGTT CMM_2840 3167968 - 3167078 - | putative sugar kinase CMM_2841 3169025 - 3167961 - | LacI family transcriptional regulator CMM_2842 3169139 - 3170239 + | putative sugar ABC transporter, substrate binding protein TERM 700 3170614 - 3170586 - g 72 -13.8 -3.35996 | gap 1 GACCGCGAGCCAGAA CGGCCTGC-CGGC ACCC GCCGCGCTGGCCG CCGGGCTCGTCGTGG CMM_2843 3170242 - 3171288 + | putative sugar ABC transporter, permease component CMM_2844 3171285 - 3172082 + | putative sugar ABC transporter, ATP-binding protein CMM_2845 3172079 - 3172372 + | hypothetical protein TERM 701 3172430 - 3172389 - T 100 -27.3 -3.06796 | opp_overlap 3172423 GGGTACGGCACCGAA CCCGCGGCCGCCCGGCG TCTCGACG CGCCGGGCGGCCGCGGT CGTGCCCCACGGGGC CMM_2846 3173699 - 3172596 - | putative plasmid maintenance system, antidote protein CMM_2847 3174063 - 3173728 - | putative plasmid maintemance system, killer protein TERM 702 3174415 - 3174379 - R 88 -21 -2.54523 | GGAGAGCTGAACTGA CGGGGCTTGGAAAGCA GCCAA CGCCTTCCAAGCCCCG TCAGCGTGGCGAACA CMM_2848 3175247 - 3174495 - | putative short chain dehydrogenase/oxidoreductase TERM 703 3175719 - 3175680 - g 73 -15.7 -3.28712 | gap 2 CCTCGTGGCCCAGAA CGCCGCGGCCC-C-CGGCG CCGC CGCCGCGCAGGCCGCGTCG AACCTGCCCTTCACG CMM_2849 3175441 - 3177510 + | putative phosphatase CMM_2850 3177707 - 3178060 + | hypothetical protein CMM_2851 3178108 - 3178713 + | hypothetical protein TERM 704 3178943 - 3178979 + G 71 -15.7 -3.14132 | opp_overlap 3178941, overlap 3178966 CCTGGTCGACGAAGC GGCGGCGAGCGGGGGCG TCA TGCCCACGCTCGGCGGC TTCGTCGCCGGCGCG CMM_2852 3178770 - 3179507 + | ZIP family zinc transporter CMM_2853 3180116 - 3179562 - | MarR family transcriptional regulator TERM 705 3181167 - 3181141 - g 74 -17.2 -2.78384 | TCTTCCCCGATCAGA CCGGCCAGCGCG CAC CGCGCGGACCGG CCGTCGCCCGCACGG CMM_2854 3180258 - 3182069 + | hypothetical protein CMM_2855 3182066 - 3183478 + | multidrug exporter MOPMATE family membrane protein CMM_2856 3184354 - 3183494 - | putative aldo/keto reductase CMM_2857 3184846 - 3184406 - | hypothetical protein CMM_2858 3185875 - 3184856 - | S-isoprenylcysteine methyltransferase-like protein CMM_2859 3186387 - 3185872 - | hypothetical protein CMM_2860 3186445 - 3186981 + | hypothetical protein CMM_2861 3187048 - 3187608 + | putative acetyltransferase CMM_2862 3188123 - 3187605 - | putative acetyltransferase TERM 706 3188329 - 3188350 + G 70 -13.7 -3.23216 | opp_overlap 3188320 CGAGAACGCGGCCCC GCTCGGCGC GGCG GCGCTGAGC TTCGTGGTGATCGCG CMM_2863 3188177 - 3188785 + | hypothetical protein CMM_2864 3188818 - 3189879 + | membrane protein, putative DMT transporter CMM_2865 3189889 - 3190584 + | hypothetical protein CMM_2866 3190640 - 3191359 + | putative hydrolase CMM_2867 3191473 - 3191934 + | MarR family transcriptional regulator CMM_2868 3191994 - 3192863 + | putative membrane-bound Zn-dependent protease CMM_2869 3193115 - 3194224 + | hypothetical protein CMM_2870 3194287 - 3194934 + | hypothetical protein pgaA 3196445 - 3194955 - | hypothetical protein CMM_2872 3197429 - 3196563 - | putative hydrolase/acyltransferase CMM_2873 3197579 - 3198913 + | diaminobutyrate--2-oxoglutarate aminotransferase CMM_2874 3199315 - 3198968 - | hypothetical protein CMM_2875 3199821 - 3199354 - | hypothetical protein CMM_2876 3200512 - 3199850 - | putative two-component system, response regulator CMM_2877 3202332 - 3200509 - | putative two-component system, sensor kinase CMM_2878 3202468 - 3203919 + | citrate transporter CMM_2879 3205512 - 3204043 - | hypothetical protein CMM_2880 3206044 - 3205613 - | hypothetical protein TERM 707 3206787 - 3206822 + G 70 -13.9 -3.23216 | gap 1, opp_overlap 3206785, overlap 3206785 ATGCCCGAGGACACC GCCGCCGCCGTCGAGC TGGTC GC-CGCCGGCGTCGGC TTCGTGGTCGTGCCG CMM_2881 3206148 - 3207173 + | LysR family transcriptional regulator CMM_2882 3207935 - 3207204 - | hypothetical protein CMM_2883 3208085 - 3208432 + | hypothetical protein ubiA 3209358 - 3208462 - | prenyltransferase TERM 708 3208690 - 3208659 - G 71 -8.8 -4.08216 | overlap 3208662 GCAGCCCCGTGAAAA GCATCGCG-ACGCC CGCCGC GGCGTACGCGA-GC ACGGCGATCCGCACG crtY2 3209719 - 3209351 - | putative C50 carotenoid epsilon cyclase crtY1 3210060 - 3209716 - | putative C50 carotenoid epsilon cyclase crtBI 3212705 - 3210060 - | putative bifunctional phytoene synthase/phytoene dehydrogenase crtE 3213724 - 3212702 - | putative geranylgeranyl pyrophosphate synthase idiA 3213817 - 3214401 + | isopentenyl-diphosphate delta-isomerase CMM_2890 3215352 - 3214474 - | putative phospholipase CMM_2891 3216064 - 3215480 - | MarR family transcriptional regulator TERM 709 3216490 - 3216440 - g 73 -17.6 -2.52464 | overlap 3216400 TGGCCGCCGAATCGA TCGCCCCGCGGGCCGTCGT-GCCG CAGGC CAGCGACGACGGCC-GCGCGGCGC TCGTCGCCGTGCCGC CMM_2892 3216142 - 3218220 + | RND family transporter TERM 710 3218283 - 3218253 - f 75 -14.8 -3.28924 | gap 1, overlap 3218256 CACCGCGTGCCATAA TGATCGGGCCGGC GTCGAG GCCGGCCCGA-CA GCGGAGGAACCACAT TERM 711 3218281 - 3218256 - f 76 -17.6 -2.82623 | overlap 3218253 CGCGTGCCATAATGA TCGGGCCGGC GTCGAG GCCGGCCCGA CAGCGGAGGAACCAC CMM_2893 3218297 - 3219049 + | putative short chain dehydrogenase/oxidoreductase CMM_2894 3219654 - 3219046 - | TetR family transcriptional regulator CMM_2895 3219715 - 3220203 + | hypothetical protein CMM_2896 3221165 - 3220506 - | hypothetical protein CMM_2897 3222004 - 3221309 - | hypothetical protein aldA 3223197 - 3222082 - | putative L-alanine dehydrogenase CMM_2899 3223363 - 3223857 + | leucine-responsive regulatory protein dcd 3224476 - 3223871 - | deoxycytidine triphosphate deaminase CMM_2901 3224825 - 3227245 + | hypothetical protein CMM_2902 3228462 - 3228028 - | hypothetical protein CMM_2903 3228643 - 3229398 + | putative ABC transporter, ATP-binding protein CMM_2904 3229398 - 3230696 + | hypothetical protein CMM_2905 3230693 - 3231316 + | hypothetical protein CMM_2906 3232077 - 3231313 - | GntR family transcriptional regulator gntK 3232226 - 3232744 + | putative gluconokinase gntP 3232827 - 3234227 + | gluconate permease CMM_2909 3234799 - 3234224 - | putative pyridoxamine 5-phosphate oxidase TERM 712 3234410 - 3234358 - G 73 -17.6 -2.62616 | gap 1, opp_overlap 3234388 GGATGCGCCACAGCA CCCAGCCGCCCGGGTCGACGTCGGC GCGA GCCGCGGCCGACC-GGGCAGCGAGG TCGGCGGCGCTCTCC CMM_2910 3235653 - 3234844 - | putative DNA glycosylase/endonuclease VIII CMM_2911 3236730 - 3235699 - | hypothetical protein CMM_2912 3237001 - 3237747 + | putative short-chain dehydrogenase/oxidoreductase CMM_2913 3237806 - 3238822 + | putative oxidoreductase CMM_2914 3238887 - 3239504 + | putative reductase TERM 713 3239541 - 3239574 + T 95 -26.1 -2.70932 | gap 1 CACGCCCGCGCACGA CGACGGCCGCG-CCCC CGA GGGGACGCGGCCGTCG TCGTTCGAGCCCGGA CMM_2915 3240769 - 3239594 - | putative Zn-dependant dehydrogenase CMM_2916 3241494 - 3241144 - | hypothetical protein CMM_2917 3241974 - 3241651 - | hypothetical protein CMM_2918 3242226 - 3242429 + | hypothetical protein TERM 714 3242630 - 3242669 + G 72 -14.2 -3.39803 | gap 1 GGCCACGCGCGACGA GGTCGCCGCGCTCGTCGCC GAG GCCGTCGAGCTCGGC-ACC TTCTCCGTGTGCGTC deoC 3242535 - 3243257 + | deoxyribose-phosphate aldolase CMM_2920 3243257 - 3244552 + | putative aminopeptidase 2 CMM_2921 3245347 - 3244634 - | hypothetical protein CMM_2922 3245403 - 3246053 + | putative dienelactone hydrolase CMM_2923 3246154 - 3246573 + | hypothetical protein CMM_2924 3246688 - 3247383 + | hypotheical membrane protein CMM_2925 3248716 - 3247415 - | putative helicase CMM_2926 3248847 - 3249866 + | hypothetical protein CMM_2927 3249982 - 3250410 + | hypothetical protein fecE 3251276 - 3250434 - | putative iron-siderophore ABC transporter, ATP-binding protein fecD2 3252417 - 3251311 - | putative iron-siderophore ABC transporter,permease component fecC2 3253472 - 3252414 - | putative iron-siderophore ABC transporter,permease component fecB2 3253575 - 3254579 + | putative iron-siderophore ABC transporter,substrate-binding protein TERM 715 3254596 - 3254632 + F 100 -28.8 -2.63596 | overlap 3254607 CCGGATCCGCACCCC CGAGGGCCCGTCGCGC ACGCA GCGCGGCGGGCCCTCG TCGTCTCCGGTGCCG CMM_2932 3254708 - 3255382 + | hypothetical protein CMM_2933 3257395 - 3255416 - | membrane protein, putative copper export protein TERM 716 3255472 - 3255520 + g 76 -10.3 -3.98172 | gap 3 TGTAGGCCTCGAGCT CGGCGTCGCCGTCGCGGT-CGGCC TTGC GGTCGTACCGC-ACGGAGTC-CCG TTTGTCGCTCTTGCT TERM 717 3257468 - 3257512 + r 100 -29.4 -2.78384 | gap 1, opp_overlap 3257473 3257475 GCGACCGGCCGGGAA CGACACAGCGGGGGCGCCGAC CGGA GTCGGCGCCCCCGCTGGG-CG TGTGGTGAGGAGGAC TERM 718 3257508 - 3257473 - R 100 -32 -2.90075 | opp_overlap 3257468, overlap 3257475 CGGCCGGGAACGACA CAGCGGGGGCGCCGAC CGGA GTCGGCGCCCCCGCTG GGCGTGTGGTGAGGA TERM 719 3257506 - 3257475 - R 100 -28.8 -3.00298 | opp_overlap 3257468, overlap 3257473 GCCGGGAACGACACA GCGGGGGCGCCGAC CGGA GTCGGCGCCCCCGC TGGGCGTGTGGTGAG hupB 3257814 - 3257527 - | putative DNA-binding protein HU rpsN 3258251 - 3257946 - | 30S ribosomal protein S14 rpmG 3258421 - 3258254 - | 50S ribosomal protein L33 rpmB 3258657 - 3258421 - | 50S ribosomal protein L28 furB 3259321 - 3258872 - | ferric uptake regulator family protein CMM_2939 3260244 - 3259318 - | putative metal ABC transporter, permease component CMM_2940 3261116 - 3260241 - | putative metal ABC transporter, ATP-binding protein CMM_2941 3262066 - 3261113 - | putative metal ABC transporter, substrate-binding protein CMM_2942 3263536 - 3262136 - | branched-chain alpha-keto acid dehydrogenase subunit E2 CMM_2943 3264632 - 3263577 - | putative 2-keto acid dehydrogenase,dehydrogenase E1 beta component CMM_2944 3265741 - 3264629 - | putative 2-keto acid dehydrogenase,dehydrogenase E1 beta component hisC2 3266866 - 3265751 - | putative aminotransferase CMM_2946 3266937 - 3267332 + | hypothetical protein CMM_2947 3268615 - 3267341 - | hypothetical protein CMM_2948 3268938 - 3268612 - | hypothetical protein CMM_2949 3269071 - 3269598 + | putative protein-tyrosine-phosphatase purB 3269612 - 3270994 + | adenylosuccinate lyase CMM_2951 3271322 - 3271053 - | hypothetical protein CMM_2952 3271981 - 3271325 - | hypothetical protein ppgK2 3272339 - 3273223 + | putative polyphosphate glucokinase CMM_2954 3273314 - 3274429 + | putative glycerate kinase CMM_2955 3275672 - 3274446 - | putative glycosyl transferase TERM 720 3275802 - 3275768 - H 70 -12.9 -3.30124 | gap 1 CCGGATCGGCGACAA TGGACGGA-TGCGGTC GCCC GTCCGCAACCCGTCCA CCCTCCCTCGCCCGG CMM_2956 3275841 - 3276230 + | hypothetical protein prfC 3276287 - 3277912 + | putative peptide chain release factor 3 CMM_2958 3278067 - 3278372 + | hypothetical protein dnaB 3279861 - 3278482 - | putative replicative DNA helicase TERM 721 3279875 - 3279906 + r 75 -14.5 -3.35798 | ACGTGCGGCTCCCCT CGGTCG-GCTGGGCG GATG CGCCC-GCACGACCG TTCTAGCTCGGACCT TERM 722 3280269 - 3280305 + r 90 -22.3 -2.83641 | CCGGCTGGTTAACCG CCGATGGCGGCGGGCTC CAG GAGCCCACCGCCATCGA TCTCGTGCTGCGTTA rplI 3280770 - 3280318 - | 50S ribosomal protein L9 rpsR 3281045 - 3280782 - | 30S ribosomal protein S18 ssb 3281633 - 3281082 - | single-strand DNA-binding protein rpsF 3282101 - 3281637 - | 30S ribosomal protein S6 pcnA 3283695 - 3282265 - | putative RNA nucleotidyltransferase CMM_2965 3283789 - 3286086 + | hypothetical protein CMM_2966 3286123 - 3287751 + | MOP family membrane protein trxB1 3287908 - 3288945 + | putative thioredoxin reductase trxA 3289013 - 3289336 + | putative thioredoxin CMM_2969 3289507 - 3290829 + | transcriptional regulator ddlB 3290873 - 3291838 + | putative D-alanine-D-alanine ligase parB1 3292880 - 3291891 - | putative chromosome partitioning protein parA 3293761 - 3292880 - | putative chromosome partitioning protein gidB 3294547 - 3293912 - | glucose-inhibited division protein B TERM 723 3295079 - 3295047 - R 86 -20.7 -2.75064 | opp_overlap 3295050, overlap 3295050 CTGTGCACGGAAGCA GAAGAGACCCGATCC ACC GGATCGGGCCTCTCC ATTCACACCGCGGAA TERM 724 3295050 - 3295076 + r 74 -16.6 -2.52464 | opp_overlap 3295047 3295050 TGCACGGAAGCAGAA GAGACCCGATCC ACC GGATCGGGCCTC TCCATTCACACCGCG TERM 725 3295076 - 3295050 - R 93 -18.8 -3.52652 | opp_overlap 3295050, overlap 3295047 TGCACGGAAGCAGAA GAGACCCGATCC ACC GGATCGGGCCTC TCCATTCACACCGCG CMM_2974 3295653 - 3295096 - | putative DNA/RNA binding protein CMM_2975 3296612 - 3295650 - | putative inner membrane protein translocase component YidC CMM_2976 3296934 - 3296623 - | hypothetical protein rnpA 3297272 - 3296931 - | putative RNAse P, protein component rpmH 3297413 - 3297276 - | hypothetical protein