TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.275468 %AT, 2868607 nt, 14198 terms. Intergenic: 0.280626 %AT, H2T: 333547 nt, 1751 terms; T2T: 121911 nt, 1326 terms; H2H: 119066 nt, 1384 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|189016631|ref|NC_010399.1| Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, complete sequence (length 50350) CMS_pCS0001 1 - 1440 + | repA TERM 1 1469 - 1489 + F 74 -14.1 -3.56568 | opp_overlap 1469, overlap 1460 GACCCCGGCGGTAAA CTAGTCGCA CAG TGCGACTAG TTTGACGACTGGTTG TERM 2 1489 - 1469 - f 74 -14.1 -3.53224 | opp_overlap 1469 1460 GACCCCGGCGGTAAA CTAGTCGCA CAG TGCGACTAG TTTGACGACTGGTTG CMS_pCS0002 1969 - 2712 + | hypothetical protein TERM 3 3158 - 3141 - f 80 -7 -4.60924 | opp_overlap 3146, overlap 3142 3146 GAAAGTCGCTAAAAA GGCAAG GCGGGT CTTGCC TTGCGGGGCAAGCCC CMS_pCS0003 3190 - 3399 + | hypothetical protein CMS_pCS0004 3396 - 3785 + | hypothetical protein parA 4004 - 4678 + | putative plasmid partitioning protein CMS_pCS0006 4678 - 4941 + | hypothetical protein CMS_pCS0007 5009 - 7198 + | hypothetical protein CMS_pCS0008 7510 - 7208 - | hypothetical protein CMS_pCS0009 7755 - 9002 + | hypothetical protein CMS_pCS0010 9050 - 9436 + | hypothetical protein CMS_pCS0011 9445 - 10161 + | hypothetical protein CMS_pCS0012 10161 - 11546 + | putative integral membrane protein CMS_pCS0013 11543 - 13225 + | hypothetical protein CMS_pCS0014 13222 - 14793 + | putative ATP/GTP-binding protein CMS_pCS0015 14808 - 15911 + | putative lipoprotein CMS_pCS0016 15908 - 16363 + | putative lipoprotein CMS_pCS0017 16357 - 16881 + | hypothetical protein CMS_pCS0018 16878 - 17651 + | hypothetical protein CMS_pCS0019 17673 - 18236 + | hypothetical protein TERM 4 18260 - 18299 + T 72 -14.2 -3.41002 | overlap 18261 18264 18269 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 5 18261 - 18298 + T 73 -17.7 -2.63878 | overlap 18260 18264 18269 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 6 18264 - 18295 + T 73 -18 -2.6072 | overlap 18261 18260 18269 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 7 18269 - 18290 + T 71 -15.1 -3.10677 | overlap 18264 18261 18260 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_pCS0020 19209 - 18247 - | putative integrase TERM 8 20157 - 20196 + G 73 -15.7 -3.26745 | opp_overlap 20154, overlap 20172 GACGTCGACGAACCT GCGGCGCCGCGTGTCG-GC AGCG GCGCG-CGCGCCGCGCCGC TGTCTTTGAACTGTC TERM 9 20172 - 20200 + G 93 -19.6 -3.64599 | opp_overlap 20154, overlap 20157 GCGGCGCCGCGTGTC GGCAGCGGCGCG CGCGC CGCGCCGCTGTC TTTGAACTGTCATCC CMS_pCS0021 19523 - 20227 + | hypothetical protein pat1 21147 - 20278 - | pat1 protein CMS_pCS0023 21558 - 21172 - | hypothetical protein CMS_pCS0024 21680 - 21826 + | hypothetical protein CMS_pCS0025 22260 - 21811 - | hypothetical protein TERM 10 23830 - 23791 - g 72 -14.2 -3.41002 | overlap 23792 23795 23800 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 11 23829 - 23792 - g 73 -17.7 -2.63878 | overlap 23791 23795 23800 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 12 23826 - 23795 - g 73 -18 -2.6072 | overlap 23792 23791 23800 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 13 23821 - 23800 - g 71 -15.1 -3.10677 | overlap 23795 23792 23791 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_pCS0027 22881 - 23843 + | putative transposase CMS_pCS0028 24153 - 24380 + | hypothetical protein CMS_pCS0029 25210 - 24626 - | hypothetical protein CMS_pCS0030 25372 - 25560 + | hypothetical protein CMS_pCS0031 25585 - 25686 + | hypothetical protein CMS_pCS0032 26446 - 25973 - | hypothetical protein CMS_pCS0033 26897 - 26424 - | hypothetical protein CMS_pCS0034 27050 - 27406 + | hypothetical protein CMS_pCS0035 27663 - 27403 - | hypothetical protein CMS_pCS0036 28905 - 27895 - | hypothetical protein pat1 29632 - 30261 + | pat1 protein CMS_pCS0038 30304 - 30429 + | hypothetical protein CMS_pCS0039 31047 - 30721 - | hypothetical protein TERM 14 30999 - 31033 + g 76 -15.6 -3.42996 | TGCCGGGGATGGGCG CGAACTCGCCGCGCTC GGC GCGAGCGGCGAGATCG TTGTAGTCGGTCATG CMS_pCS0040 31438 - 31049 - | hypothetical protein CMS_pCS0041 31531 - 31785 + | hypothetical protein CMS_pCS0042 31813 - 32307 + | hypothetical protein CMS_pCS0043 32357 - 32800 + | hypothetical protein CMS_pCS0044 32899 - 33282 + | putative DNA-binding protein CMS_pCS0045 33290 - 33736 + | hypothetical protein CMS_pCS0046 33858 - 34067 + | hypothetical protein fic 34093 - 34674 + | cell filamentation protein TERM 15 34739 - 34697 - g 81 -19.2 -2.94099 | gap 2 CGCGCTGACCAGAGA GCCCGAGGGTGCGGCGCCGC TCAGC GCGGCGC-GCACCG-CGGGC CGCGAGCCGGGGCCG CMS_pCS0048 34653 - 34934 + | hypothetical protein TERM 16 35620 - 35608 - f 77 -2.6 -4.62471 | GCTAAGGCGTAAAAA CGCC TTCAC GGCA AAAAACGAGTGGAAG parB 35629 - 37194 + | chromosome partitioning protein CMS_pCS0051 37516 - 37328 - | hypothetical protein CMS_pCS0052 37821 - 37513 - | hypothetical protein TERM 17 37928 - 37958 + H 74 -16 -3.07816 | GTGGTGCGCCGCGTG GCGGCGCGCGCGGC CAG GCCGCGCCGGTCGC TTCGCTCCATCGGAG CMS_pCS0053 38232 - 39134 + | hypothetical protein CMS_pCS0054 39652 - 39771 + | hypothetical protein ssb 39795 - 40547 + | single-strand binding protein homolog ssb CMS_pCS0056 40550 - 41071 + | hypothetical protein CMS_pCS0057 41068 - 41205 + | hypothetical protein CMS_pCS0058 41202 - 41969 + | putative secreted protein CMS_pCS0059 42040 - 42501 + | hypothetical protein CMS_pCS0061 43339 - 45393 + | cellulase CelA TERM 18 45421 - 45463 + T 100 -24.3 -3.14344 | gap 1 CGACCTCCACATGTA CGCGGCGATGGCTCCAGGGA TGCG TCCCCGGAGCCATCGC-GCG TTAGTCGCCGCACTC CMS_pCS0062 46615 - 45698 - | putative MerR-family transcriptional regulator TERM 19 46787 - 46759 - R 70 -14.5 -3.28712 | overlap 46785 GCTCGCCGCGGAGAA CCGCGGCCGCGAG TGT CCCGCAACCACGG CCCGCAAGGGGGCGG CMS_pCS0063 47634 - 47068 - | hypothetical protein CMS_pCS0064 48263 - 47631 - | DNA recombinase CMS_pCS0065 48640 - 48455 - | hypothetical protein TERM 20 48885 - 48868 - R 100 -12.7 -5.14563 | opp_overlap 48868 TCGGGCATGAAAAAA GCCAGCC TGTG GGCTGGC TAGTTCGAGGTAAGG CMS_pCS0066 49612 - 49340 - | hypothetical protein TERM 21 49781 - 49809 + G 70 -16.1 -2.78596 | opp_overlap 49777 49776 CGGTTGAGAAGGGGG TGACTCCTCGGTG GAC CATCGAGGAGTCG TCTCGTGACGCCGTG CMS_pCS0067 49729 - 49974 + | hypothetical protein SEQUENCE gi|170780462|ref|NC_010407.1| Clavibacter michiganensis subsp. sepedonicus, complete genome (length 3258645) dnaA 1 - 1431 + | chromosomal replication initiator protein DnaA TERM 1 1528 - 1471 - f 89 -23.6 -2.62184 | gap 2, opp_overlap 1486, overlap 1427 1473 1476 GCGGCGCGCACAGGA GACG-ACGCA-GCAGGAGGGGTCGGACC ATGA GGTCCGGCCCCTTCTGCGTGCGTACGCC GAGCCAGGCCCCGCA TERM 2 1526 - 1473 - f 87 -22.6 -2.85351 | gap 2, opp_overlap 1486, overlap 1427 1471 1476 GGCGCGCACAGGAGA CG-ACGCA-GCAGGAGGGGTCGGACC ATGA GGTCCGGCCCCTTCTGCGTGCGTACG CCGAGCCAGGCCCCG TERM 3 1522 - 1476 - f 89 -23.1 -2.68434 | gap 1, opp_overlap 1486, overlap 1427 1473 1471 GCGCACAGGAGACGA CGCA-GCAGGAGGGGTCGGACC ATGA GGTCCGGCCCCTTCTGCGTGCG TACGCCGAGCCAGGC TERM 4 1486 - 1511 + F 86 -18.3 -3.36878 | opp_overlap 1476 1473 1471 GACGACGCAGCAGGA GGGGTCGGACC ATGA GGTCCGGCCCC TTCTGCGTGCGTACG dnaN 1939 - 3129 + | DNA polymerase III, beta chain TERM 5 3149 - 3196 + T 81 -17.6 -3.2244 | overlap 3146 3146 3153 ACTGGGTCATGACGT TGGTGACACTCGGGCCGCGGGC GTGA GCCCGTGGCTCGAGTGGATCCG TTCAGTGTTGTAGTG TERM 6 3153 - 3192 + T 73 -17.8 -2.57335 | overlap 3149 3146 3146 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTCGAGTGGA TCCGTTCAGTGTTGT CMS_0003 4102 - 3140 - | putative insertion element IS1121 transposase CMS_0004 4224 - 5111 + | putative 6-phosphogluconate dehydrogenase CMS_0005 5119 - 6345 + | DNA replication protein CMS_0006 6342 - 6854 + | hypothetical protein CMS_0007 7095 - 9089 + | DNA gyrase subunit B CMS_0008 9172 - 11832 + | DNA gyrase subunit A CMS_0009 11825 - 12232 + | putative integral membrane protein TERM 7 12278 - 12247 - T 76 -12.2 -3.87815 | GCCGATTGGGAGAAA CGGGCAGGCGTACG GTAA CGTGTACCTGCCCG ATGGGGATATAGCTC TERM 8 12385 - 12361 - T 78 -17.2 -3.14051 | overlap 12359 GTATCCCCACCAACA CCCCCGGATC CGCAT GATCCGGGGG CAAGGCGGGAAACGA TERM 9 12654 - 12619 - T 93 -24.8 -2.70932 | opp_overlap 12623, overlap 12623 GCGTCGCCGGAACGA CGAAGGCCCGGGCACC TTTC GGTGGCCGGGCCTTCG TCGGATCCCGAGGGA TERM 10 12650 - 12623 - T 84 -18.4 -3.27298 | opp_overlap 12623, overlap 12619 CGCCGGAACGACGAA GGCCCGGGCACC TTTC GGTGGCCGGGCC TTCGTCGGATCCCGA TERM 11 12623 - 12650 + T 82 -18.4 -3.16564 | opp_overlap 12623 12619 CGCCGGAACGACGAA GGCCCGGGCACC TTTC GGTGGCCGGGCC TTCGTCGGATCCCGA CMS_0010 13322 - 12684 - | putative integral membrane protein cypB 13432 - 13971 + | putative peptidyl-prolyl cis-trans isomerase yggP 13971 - 14834 + | rhomboid family membrane protein TERM 12 15211 - 15181 - T 91 -21.3 -3.50853 | opp_overlap 15183 TGCCGGGAAGCAGAA GAGCCCGTCACCA GCGGA TGGTGACGGGCTC TCGTGATTGCGCTGC TERM 13 15183 - 15209 + T 76 -18.1 -2.86343 | opp_overlap 15181 CCGGGAAGCAGAAGA GCCCGTCACCA GCGGA TGGTGACGGGC TCTCGTGATTGCGCT CMS_0013 15468 - 15229 - | putative integral membrane protein srtA 15550 - 16374 + | sortase CMS_0015 16377 - 16535 + | hypothetical protein CMS_0016 16532 - 17170 + | putative glutamine amidotransferase CMS_0017 19012 - 17264 - | putative serine/threonine protein kinase pknA 21045 - 19147 - | serine/threonine kinase CMS_0019 22493 - 21042 - | putative secreted penicillin-binding protein CMS_0020 23815 - 22490 - | FtsW/RodA/SpoVE family cell cycle protein CMS_0021 25142 - 23880 - | putative protein phosphatase CMS_0022 25728 - 25147 - | putative secreted protein CMS_0023 26456 - 25725 - | hypothetical protein TERM 14 26727 - 26750 + r 88 -21 -3.05844 | CGCACCAGCACTGGA GGCCCCCGGG ATCA CCCGGGGGCC TCTTCGCGTCCCACC TERM 15 29073 - 29120 + r 81 -17.6 -3.2244 | overlap 29070 29070 29077 ACTGGGTCATGACGT TGGTGACACTCGGGCCGCGGGC GTGA GCCCGTGGCTCGAGTGGATCCG TTCAGTGTTGTAGTG TERM 16 29077 - 29116 + r 73 -17.8 -2.57335 | overlap 29073 29070 29070 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTCGAGTGGA TCCGTTCAGTGTTGT CMS_0025 30026 - 29064 - | putative insertion element IS1121 transposase CMS_0026 30197 - 30883 + | putative two-component system response regulator CMS_0027 30897 - 32057 + | putative two-component system sensor kinase CMS_0028 32669 - 32088 - | putative integral membrane protein CMS_0029 32885 - 32763 - | putative ribosomal protein L36 CMS_0030 32960 - 34003 + | hypothetical protein recQ 34092 - 35954 + | ATP-dependent DNA helicase RecQ CMS_0032 37267 - 36065 - | putative serine protease TERM 17 37565 - 37580 + H 86 -8.2 -4.65895 | opp_overlap 37565 CCCCTAACGTGAGAA CGGGCG ATGA CGCCTG TTTTTCAATCAGGGG TERM 18 37605 - 37617 + G 73 -9.1 -4.07568 | opp_overlap 37604 37603 CAGGGGAGTAAAATG CGCGT TCC ACGCG TTTTCCGCCGGCAGA TERM 19 39939 - 39911 - g 83 -15.9 -3.65046 | opp_overlap 39910 39909 39905 39911 GGTGCAGGCCAAGAA CGCCGCCGGCGGC GTG ACCGCCGACGTCG CGTATTCGTTTGCAA CMS_0033 37602 - 41009 + | putative sortase-processed secreted protein CMS_0034 41006 - 41209 + | putative integral membrane protein CMS_0035 41702 - 41571 - | putative integral membrane protein TERM 20 41660 - 41648 - G 80 -4.1 -4.66953 | CGAACAGGGCAAAAA GCAAA TCG TTCGC CAGAATGCACCGGAT CMS_0036 42106 - 42321 + | putative integral membrane protein TERM 21 42758 - 42797 + T 72 -14.2 -3.41002 | overlap 42759 42762 42767 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 22 42759 - 42796 + T 73 -17.7 -2.63878 | overlap 42758 42762 42767 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 23 42762 - 42793 + T 73 -18 -2.6072 | overlap 42759 42758 42767 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 24 42767 - 42788 + T 71 -15.1 -3.10677 | overlap 42762 42759 42758 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0038 43707 - 42745 - | putative insertion element IS1121 transposase mscL 44287 - 43805 - | putative mechanosensitive channel CMS_0040 44643 - 44284 - | putative integral mebrane protein CMS_0041 45317 - 44742 - | putative 5-formyltetrahydrofolate cyclo-ligase-related protein galU 45358 - 46254 + | UTP-glucose-1-phosphate uridylyltransferase CMS_0043 46312 - 46980 + | putative GCN5-related N-acetyltransferase CMS_0044 47079 - 48047 + | putative integral membrane protein TERM 25 48234 - 48261 + F 70 -16.4 -2.57344 | opp_overlap 48240, overlap 48233 48240 ATCTCCTTAGGTCCA CAAGAACCCCGC TCCG GCGGGGTTTTTG CTTGTCGCCGGCATG TERM 26 48255 - 48240 - f 74 -11.8 -3.79906 | opp_overlap 48234 48233 48240 TTAGGTCCACAAGAA CCCCGC TCCG GCGGGG TTTTTGCTTGTCGCC TERM 27 48240 - 48255 + F 95 -11.8 -4.93365 | opp_overlap 48240, overlap 48234 48233 TTAGGTCCACAAGAA CCCCGC TCCG GCGGGG TTTTTGCTTGTCGCC CMS_0047 50014 - 51633 + | hypothetical protein CMS_0048 51727 - 52038 + | transmembrane protein CMS_0049 52495 - 52058 - | hypothetical protein CMS_0050 52615 - 53616 + | LacI family transcriptional regulator CMS_0051 53732 - 55081 + | putative extracellular solute-binding protein TERM 28 55533 - 55575 + G 70 -14 -3.19157 | overlap 55536 55564 GCTCGCGCTCCTCGT GAACCTCGGCCTCCCGGGCC AGT GGCTCTGGCGGCTGGCGTTC TTCCTGCCGTTCCTC CMS_0052 55177 - 56121 + | putative integral membrane binding-protein-dependent transport protein CMS_0053 56118 - 57038 + | putative integral membrane binding-protein-dependent transport protein TERM 29 58357 - 58329 - g 72 -14.5 -3.41051 | CGACCGCTACGACAA CGACCGCTTCGGC ACG GCCGACGTGGTCG ACGTGAGCGCGACCT abfA 57121 - 58659 + | alpha-L-arabinofuranosidase TERM 30 58702 - 58749 + F 100 -22.8 -3.6215 | opp_overlap 58719, overlap 58703 58705 CGCGCGGGCGGATTC TCGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTGG TTTCGGGTGAGTTGC TERM 31 58703 - 58748 + F 89 -24.1 -2.76969 | opp_overlap 58719, overlap 58702 58705 GCGCGGGCGGATTCT CGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTG GTTTCGGGTGAGTTG TERM 32 58705 - 58746 + F 91 -23.1 -2.92792 | opp_overlap 58719, overlap 58703 58702 GCGGGCGGATTCTCG TGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCG TGGTTTCGGGTGAGT TERM 33 60088 - 60061 - g 100 -19.2 -4.21194 | opp_overlap 60054 60051 GCCGACCACGCAAAA CGCTCGACTGGG ACAC CCCAGCCGAGCG AATGCGTGCTCTACT CMS_0055 58824 - 60116 + | putative insertion element ISCmi3 transposase CMS_0056 60153 - 62114 + | putative helicase TERM 34 62230 - 62197 - f 70 -16.8 -2.78384 | gap 1 GGGGCGGGGAGGAGA CCCGGTCCCG-AGCC TCGAG GGCTGCGGGACCGAG CCGCGCTCACGGCCG CMS_0057 62529 - 64538 + | hypothetical protein CMS_0058 64811 - 66367 + | putative extracellular solute-binding protein TERM 35 67097 - 67139 + G 77 -17.8 -2.93723 | gap 1, overlap 67090 ACCATCATCGTGCTG GCGACGCTCTCGGTGCCGG GCTACA TCGGCACCGAG-GCGTCCC TGTCGTTCCTCGGCG CMS_0059 66371 - 67333 + | oligopeptide transport integral membrane protein CMS_0060 67330 - 68322 + | oligopeptide transport system integral membrane protein CMS_0061 68319 - 69185 + | putative ABC transporter ATP-binding subunit TERM 36 69281 - 69322 + G 71 -15.1 -3.15544 | gap 1, opp_overlap 69277 69274 CTCACCAAGGAGTAC GTGACGCGC-GGCGGCCG CGGGCTC CGGCCGCCCGTGCGGCGC TTCCTCGCGGTCGAC CMS_0062 69182 - 70117 + | putative ABC transporter ATP-binding protein TERM 37 71374 - 71334 - g 72 -16.7 -2.80016 | overlap 71331 GTGGATCACGAACGA GCACGAGCACGACGGCCTC GGA GCGCCCGGCGTGCTCGGGC GCCTGATGGACACGA pip 70114 - 71421 + | putative prolyl aminopeptidase CMS_0064 71418 - 72878 + | putative Xaa-Pro aminopeptidase II CMS_0065 72898 - 74955 + | GntR family transcriptional regulator CMS_0066 75098 - 76978 + | putative secreted oxidase CMS_0067 76975 - 77892 + | putative dihydropicolinate synthase CMS_0068 77900 - 78901 + | putative proline racemase CMS_0069 78928 - 80439 + | putative aldehyde dehydrogenase TERM 38 80574 - 80584 + F 73 -2.4 -4.57569 | overlap 80553 GGAGCGCGTTGGAGG CCCG CGA CGTG TTTTTCGGCAGGTGG CMS_0070 80666 - 82897 + | putative acyl CoA oxidase TERM 39 82925 - 82963 + T 100 -25.4 -2.62983 | GTCCCACGGACGCGC AGATGCCCGGGTCACCTC ACG GAGGTGGCCCGGGCATCG TGGTGTCGCGGTCGG CMS_0071 83849 - 82980 - | putative peptidase CMS_0072 84544 - 84014 - | hypothetical protein CMS_0073 84997 - 84650 - | putative PemK-like protein CMS_0074 85242 - 84991 - | putative DNA-binding protein CMS_0075 86101 - 85313 - | hypothetical protein CMS_0076 86215 - 87189 + | putative proline iminopeptidase gct 87756 - 87259 - | putative glycerol-3-phosphate cytidyltransferase TERM 40 88070 - 88086 + H 82 -9.4 -4.26344 | opp_overlap 88069 88070 CTACATTCGACCAAC CCCACC TGTCT GGTGGG TTTTCATCGGCCTGT CMS_0078 88135 - 90780 + | putative sortase-sorted surface protein TERM 41 90798 - 90829 + F 100 -27.4 -2.78384 | opp_overlap 90798 CCCGCACGCACGACA GGACGGGCCGACCC CTCG GGGTCGGCCCGTCC TGTCGTGCCCGGGGA TERM 42 90829 - 90798 - f 100 -27.4 -2.80816 | opp_overlap 90798 CCCGCACGCACGACA GGACGGGCCGACCC CTCG GGGTCGGCCCGTCC TGTCGTGCCCGGGGA CMS_0079 91133 - 93754 + | putative sortase-sorted surface protein CMS_0080 94101 - 95654 + | putative glycosyl transferase CMS_0081 95654 - 96898 + | putative glycosyl transferase CMS_0082 96895 - 97707 + | putative glycosyl transferase CMS_0083 97704 - 98945 + | putative glycosyl transferase TERM 43 99035 - 99055 + F 70 -16.9 -2.62616 | GTCGCCTGGCCGCCA TGACCGCGG CCG CCGCGGTCA TCCTGTCCGCGGTCG TERM 44 103977 - 103953 - f 74 -17.9 -2.77899 | overlap 103950 CTCGGCGAGGAAGGA CGGCACGGTCA CGG TGACCGCGCCG GTCGTCGCTCCGCCC TERM 45 105677 - 105638 - g 72 -14.2 -3.41002 | overlap 105639 105642 105647 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 46 105676 - 105639 - g 73 -17.7 -2.63878 | overlap 105638 105642 105647 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 47 105673 - 105642 - g 73 -18 -2.6072 | overlap 105639 105638 105647 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 48 105668 - 105647 - g 71 -15.1 -3.10677 | overlap 105642 105639 105638 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_0086 104728 - 105690 + | putative insertion element IS1121 transposase CMS_0087 107005 - 105701 - | putative sugar hydrolase TERM 49 106090 - 106128 + g 70 -16.7 -2.65442 | overlap 106117 GGAAGTCGTTGAGGT CGGTGATCTCGGGCGGC ATGGG GTCGCCCGAGAGCAGCG TGGTCTCGGTCATGT CMS_0088 107245 - 108303 + | putative lipoprotein CMS_0089 109159 - 108350 - | putative integral membrane protein TERM 50 109223 - 109195 - H 72 -11.8 -3.62096 | overlap 109215 CTCTACGATGGGAAA GTCAGCAGGC GGATAGTAA GCCTGCTGAC GATCACTGTAGCAGG CMS_0090 109249 - 109776 + | MarR family transcriptional regulator CMS_0091 109773 - 110513 + | hypothetical protein CMS_0092 112409 - 110574 - | putative glycosyl hydrolase CMS_0093 112656 - 113189 + | hypothetical protein TERM 51 113392 - 113373 - f 74 -13.6 -3.51365 | CCACATCGGACAGAA GCCCTCTC GTGA GAGAGGGC TCGCATCCGTGGCGA TERM 52 114307 - 114264 - g 72 -14.4 -3.40403 | overlap 114245 GTCGCTCCAGCAGAA GGTCAGCGACGCGCAGGACC TCGT GGTCCAGCGCGGCGACGAGC ACGACAAGGCGCAGC CMS_0094 114004 - 115314 + | putative secreted peptidase CMS_0095 115316 - 116722 + | putative secreted peptidase TERM 53 116768 - 116808 + T 83 -21.3 -2.62184 | gap 2, opp_overlap 116768 CCGGACGGCACACGA CGACGCCCGCCTCACCGCA TCTGC TGCGG-G-GGCGGGCGTCG TCGTGTCAGCCGCGG TERM 54 116808 - 116768 - T 83 -21.3 -2.63596 | gap 2, opp_overlap 116768 CCGGACGGCACACGA CGACGCCCGCCTCACCGCA TCTGC TGCGG-G-GGCGGGCGTCG TCGTGTCAGCCGCGG CMS_0096 117373 - 116846 - | putative inorganic pyrophosphatase CMS_0097 117428 - 118453 + | hypothetical protein CMS_0098 118455 - 119006 + | putative hypoxanthine phosphoribosyltransferase TERM 55 120244 - 120186 - g 82 -20.2 -2.71364 | overlap 120188 GCAGGGCCGCAAGCA GATCCTCGAGGTGCACGGGCGCGGCAAG CCG CTCGCCGCGGGCGTCGACCTCGAGGTCC TCGCGCGGAAGACCC TERM 56 120242 - 120188 - g 79 -19.2 -2.90194 | overlap 120186 AGGGCCGCAAGCAGA TCCTCGAGGTGCACGGGCGCGGCAAG CCG CTCGCCGCGGGCGTCGACCTCGAGGT CCTCGCGCGGAAGAC CMS_0099 119164 - 121164 + | cell division protein ftsH-like protein CMS_0100 121170 - 121760 + | putative GTP cyclohydrolase I CMS_0101 121757 - 122632 + | putative dihydropteroate synthase CMS_0102 122637 - 123347 + | hypothetical protein CMS_0103 123341 - 124264 + | bifunctional folate synthesis protein CMS_0104 124261 - 124743 + | putative integral membrane protein CMS_0105 124794 - 125282 + | putative integral membrane protein CMS_0106 125279 - 127144 + | putative integral membrane protein CMS_0107 127141 - 127902 + | hypothetical protein CMS_0108 127945 - 128823 + | putative pantoate-amino acid ligase CMS_0109 128939 - 130480 + | lysyl-tRNA synthetase CMS_0110 130493 - 130618 + | hypothetical protein CMS_0111 130640 - 130822 + | hypothetical protein TERM 57 131684 - 131642 - g 73 -16.2 -3.01712 | CCGGCGTCGGCAAGA CCGCCGTCGTCGAGGGCCTG GCG CAGGCCATCGTCAAGGGCGA CGTCCCGGAGACGCT CMS_0112 130984 - 133494 + | Clp family ATP-binding protease galE 133655 - 134542 + | udp-glucose 4-epimerase (galactowaldenase) (udp-galactose 4-epimerase) CMS_0114 134539 - 135516 + | putative aldo/keto reductase TERM 58 135713 - 135737 + F 85 -14.3 -4.04318 | opp_overlap 135672, overlap 135696 CCTGCGCGACACTCC CGCTCCGGC CTCCTGT GCCGGAGCG TTTCTCATGTGTGCA CMS_0115 135788 - 136333 + | 50S ribosomal protein L10 CMS_0116 136408 - 136791 + | 50S ribosomal protein L7/L12 TERM 59 136826 - 136861 + T 70 -13.2 -3.32844 | gap 1, overlap 136827 CTCAGGGCGCCGATC CCCTCGGGGGTCGGCGC CCT GCGTCG-TCCCCGGGGC TTGTCCGGTCAGGCG TERM 60 136827 - 136860 + T 70 -16.7 -2.59564 | gap 1, overlap 136826 TCAGGGCGCCGATCC CCTCGGGGGTCGGCGC CCT GCGTCG-TCCCCGGGG CTTGTCCGGTCAGGC CMS_0117 138492 - 136870 - | LuxR family transcriptional regulator CMS_0118 138650 - 139099 + | MarR family transcriptional regulator CMS_0119 139192 - 140424 + | major facilitator superfamily transporter protein CMS_0120 141513 - 140479 - | LacI family transcriptional regulator TERM 61 142369 - 142348 - g 70 -2.1 -4.42238 | CGAGTTCAAGGAAAA GGGCTACGA GATC CCGAAGTCC ACCGCAGAGCTCATG CMS_0121 141812 - 143176 + | putative extracellular solute-binding transport protein CMS_0122 143312 - 144283 + | putative integral membrane transport protein CMS_0123 144280 - 145269 + | putative integral membrane transport protein CMS_0124 145552 - 147246 + | putative integral membrane, nucleotide-binding ABC transporter subunit CMS_0125 148109 - 147342 - | hypothetical protein CMS_0126 148801 - 148112 - | hypothetical protein CMS_0127 148972 - 150336 + | putative cystathionine beta-synthase CMS_0128 150386 - 151558 + | cystathionine gamma-synthase rnhA 152354 - 151599 - | ribonuclease H CMS_0130 152529 - 153551 + | LacI family transcriptional regulator araB 153739 - 155427 + | ribulokinase CMS_0132 155424 - 156134 + | putative aldolase araA 156131 - 157648 + | L-arabinose isomerase CMS_0134 157723 - 158841 + | putative extracellular sugar-binding protein CMS_0135 159021 - 160550 + | putative sugar-transport ATP binding protein CMS_0136 160556 - 161743 + | putative sugar transport permease TERM 62 161777 - 161808 + F 90 -21.6 -3.21218 | GCTGACGCGCACCGA GGGGCCCGGCATCC GCAT GGATGCAGGGCCCC TTCGTCGTAAAGGAT CMS_0137 161880 - 162566 + | putative transport protein CMS_0138 163166 - 162879 - | hypothetical protein TERM 63 163210 - 163227 + H 76 -5.5 -4.431 | overlap 163197 TTGCGCGCGTATTCG GCGCTTC CTTG GAAGAGC TTTTCTCGCTGGCTC TERM 64 163422 - 163391 - H 84 -21.6 -2.72344 | GCTGACGCGCAACGA GGGGCCCGGCATCC GCAT GGATGCCGGGCCCT TCGGCGTGTGCAGCT CMS_0139 163552 - 164151 + | putative DNA-binding protein TERM 65 164209 - 164172 - T 100 -32.9 -2.89683 | AGCGGACGGGACAGA CGGAGGGCCCGGCATCC ACGT GGATGCCGGGCCCTCCG GTCGTGCGGGTGCGG TERM 66 164255 - 164294 + T 72 -14.2 -3.41002 | overlap 164256 164259 164264 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 67 164256 - 164293 + T 73 -17.7 -2.63878 | overlap 164255 164259 164264 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 68 164259 - 164290 + T 73 -18 -2.6072 | overlap 164256 164255 164264 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 69 164264 - 164285 + T 71 -15.1 -3.10677 | overlap 164259 164256 164255 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0140 165204 - 164242 - | putative insertion element IS1121 transposase xylA 166495 - 165302 - | xylose isomerase CMS_0142 166703 - 168208 + | putative beta-glucosidase CMS_0143 168205 - 168771 + | putative ribosomal-protein-alanine acetyltransferase CMS_0144 169256 - 168819 - | putative MarR-familiy transcriptional regulator CMS_0145 170348 - 169392 - | LysR family transcriptional regulator CMS_0146 170430 - 171521 + | hypothetical protein CMS_0147 171607 - 172920 + | putative membrane transport protein CMS_0148 173030 - 174040 + | putative integral membrane protein CMS_0149 174942 - 174037 - | putative aminoglycoside phosphotransferase CMS_0150 175589 - 174939 - | putative integral membrane protein TERM 70 175780 - 175749 - R 83 -21.6 -2.62616 | opp_overlap 175751, overlap 175751 CTATGGGGGACACGA GAGCCCCGCCGGAC CGGT GTCCGTCGGGGCTC TCGTGCGACTGGCGG TERM 71 175778 - 175751 - R 79 -18.4 -2.8547 | opp_overlap 175751, overlap 175749 ATGGGGGACACGAGA GCCCCGCCGGAC CGGT GTCCGTCGGGGC TCTCGTGCGACTGGC TERM 72 175751 - 175778 + r 79 -18.4 -2.79183 | opp_overlap 175751 175749 ATGGGGGACACGAGA GCCCCGCCGGAC CGGT GTCCGTCGGGGC TCTCGTGCGACTGGC CMS_0151 178709 - 175923 - | LuxR family transcriptional regulator CMS_0152 179770 - 179108 - | hypothetical protein CMS_0153 179995 - 182112 + | putative phosphate acetyltransferase CMS_0154 182167 - 183357 + | acetate kinase CMS_0155 183661 - 187968 + | putative sortase sorted surface protein TERM 73 188026 - 187993 - f 100 -26.7 -3.18681 | CCTGAATGCGAGGAA GGCGGGCGGTCCGGC GAGA GCCGGGCCGCCCGCC GGATCCGCTCCCGGG CMS_0156 188188 - 189084 + | hypothetical protein CMS_0157 189081 - 190301 + | putative integral membrane protein CMS_0158 190326 - 192839 + | DNA polymerase III subunit gamma recR 192846 - 193445 + | putative recomination protein RecR CMS_0160 193558 - 194823 + | putative aspartokinase TERM 74 195863 - 195895 + G 81 -14.7 -3.71848 | overlap 195866 GGCCGGATCCGCGCC GACGAGGGCGCGCCC GAG GGCCGCGGCCTCGCC TTCTTCATCAGCAAC CMS_0161 194885 - 195979 + | aspartate semialdehyde dehydrogenase CMS_0162 196067 - 197545 + | malate:quinone oxidoreductase TERM 75 197544 - 197585 + F 81 -17.3 -3.1875 | gap 1 TCGAGCTCCAGCACT GACGAGCCGGGCGGCCGC CACATCA GCGGCCGCCC-GTTCGCC TTCCGTTCGAATGTG CMS_0165 198956 - 199585 + | putatuve two-component response regulator CMS_0166 199586 - 200260 + | putative thymidine kinase TERM 76 200489 - 200537 + F 70 -16 -2.70932 | gap 2 CCAGGCTAGACCGAC CGTCGTGCCGGGCGGCCGCCCCAG ATG CTGGGGC-GCCATCC-GCAGGGCG TCATTCCCCGCCCCA CMS_0167 200637 - 202031 + | putative Wzz-related membrane protein CMS_0168 202394 - 203344 + | putative secreted protein CMS_0169 203341 - 205161 + | putative secreted protein CMS_0170 205178 - 205834 + | putative sortase sorted surface protein CMS_0171 206154 - 206696 + | putative sortase sorted surface protein CMS_0172 207212 - 206736 - | putative VanZ-like membrane protein CMS_0173 207332 - 208363 + | putative monooxygenase CMS_0174 208489 - 210690 + | putative penicillin-binding protein/transpeptidase TERM 77 210717 - 210748 + F 93 -25.2 -2.64616 | ATGGGGAGCGCGCGC CGACGGCCGTCGCC TCCG GGCGGCGGCCGTCG TGCTGTGCGTGGCCC CMS_0175 210845 - 212080 + | putative acyltransferase CMS_0176 212151 - 212576 + | putative integral membrane protein TERM 78 212606 - 212643 + T 100 -25.7 -3.20858 | opp_overlap 212609 212613, overlap 212613 CGCACGGCGTCCGAA CGACGAAGGGCCGCTCC TGGG GGAGCGGCCCTTGGTCG TTCATGGCTGTCGTG TERM 79 212640 - 212609 - T 82 -20.2 -2.71011 | opp_overlap 212606 212613, overlap 212613 ACGGCGTCCGAACGA CGAAGGGCCGCTCC TGGG GGAGCGGCCCTTGG TCGTTCATGGCTGTC TERM 80 212613 - 212636 + T 89 -19.6 -3.29096 | opp_overlap 212613 212609, overlap 212606 CGTCCGAACGACGAA GGGCCGCTCC TGGG GGAGCGGCCC TTGGTCGTTCATGGC TERM 81 212636 - 212613 - T 89 -19.6 -3.27298 | opp_overlap 212606 212613, overlap 212609 CGTCCGAACGACGAA GGGCCGCTCC TGGG GGAGCGGCCC TTGGTCGTTCATGGC CMS_0177 213766 - 212822 - | putative secreted phosphoesterase protein TERM 82 213747 - 213706 - G 71 -15.7 -3.05963 | gap 1, overlap 213689 ACGCGTACGCGAAGA CCGC-CGCGCCGGCGGCTGC GAC GCCGCCGACGGTGCGCGCGA TCGTGCCCACGACGC CMS_0178 216306 - 213766 - | putative penicillin-binding protein/transpeptidase CMS_0179 216412 - 216594 + | hypothetical protein CMS_0180 216594 - 217058 + | hypothetical protein TERM 83 217074 - 217132 + T 81 -20.3 -2.63596 | gap 2 CCGCCTCCCGCCGGA -G-CGGGCACGTGAGGAGGGCCGGGTGCG CAG CGCACCCGTCCCTCCTGCCGTCCCCGTCG TGGTGTCGGGTCAGC CMS_0181 219173 - 217143 - | acetyl-coenzyme A synthetase TERM 84 219323 - 219286 - H 72 -14.1 -3.33261 | gap 1, opp_overlap 219288, overlap 219287 GGGGAACGGCCAGAA CGCGCCGAAC-CCTCCCG TGG CGGGAGGCGTGCGGCGTA TGCTCATGCCGTCGG TERM 85 219288 - 219321 + H 79 -18.9 -2.82834 | gap 1, opp_overlap 219287 219286 GGAACGGCCAGAACG CGCCGAAC-CCTCCCG TGG CGGGAGGCGTGCGGCG TATGCTCATGCCGTC TERM 86 219388 - 219422 + H 72 -17.1 -2.82516 | CCGATCCTTCGTCAC GTGGCGGCGCCCGTT CCCCC GATGGGCGCCGCCCC TCTCCTCCTCCCCAG CMS_0182 219514 - 220782 + | putative secretory protein CMS_0183 220779 - 221780 + | putative integral membrane protein CMS_0184 221777 - 222343 + | hypothetical protein CMS_0185 222340 - 222741 + | hypothetical protein CMS_0186 222731 - 223087 + | hypothetical protein CMS_0187 223301 - 226339 + | DNA topoisomerase I CMS_0188 226336 - 226971 + | thymidylate kinase CMS_0189 226968 - 228227 + | putative DNA polymerase CMS_0190 228224 - 229801 + | proteinase (putative secreted protein) CMS_0191 230275 - 231636 + | putative secreted peptidase CMS_0192 231701 - 232291 + | putative nicotinamidase/pyrazinamidase CMS_0193 232371 - 233846 + | succinate-semialdehyde dehydrogenase CMS_0194 233846 - 234658 + | putative tRNA/rRNA methyltransferase CMS_0195 234778 - 235146 + | putative integral membrane protein CMS_0196 237094 - 235163 - | putative ABC transporter CMS_0197 237329 - 238222 + | putative ABC transporter ATP-binding component TERM 87 238617 - 238563 - g 71 -15 -3.16564 | gap 2 GTTCCAGGCGATGAA CGCGTCGCCGCTCACC--CCCGCCCA GATCA TGGACGGGCAGGTCATCGGCGTCGCG ATCCGCATGGCGCCC CMS_0198 238219 - 239049 + | putative ABC transporter integral membrane subunit CMS_0200 241200 - 239779 - | MFS family transporter CMS_0199 239046 - 239894 + | putative ABC transporter integral membrane subunit TERM 88 242016 - 242048 + G 77 -16.9 -3.28924 | opp_overlap 242032 GCGTCGAAGGTCTCC CGCGTCGTCGACACC ACG GGCGCCGGCGACGCG TTCTGCGGCGCGCTG CMS_0201 241359 - 242171 + | carbohydrate kinase CMS_0202 242177 - 242737 + | hypothetical protein CMS_0203 243230 - 242709 - | putative DNA-binding membrane protein CMS_0204 243373 - 243663 + | hypothetical protein CMS_0205 243869 - 243660 - | hypothetical protein CMS_0206 244423 - 243869 - | putative sulphur-binding protein CMS_0207 244544 - 245233 + | putative integral membrane protein TERM 89 245293 - 245260 - T 100 -26.1 -2.62616 | GGATCCCGGACATGA CGAGGGCCGGGCCGA CGCG TCGACCCGGCCCTCG ATCCGGTCAGCGCGC CMS_0208 246652 - 245300 - | putative integral membrane transport protein CMS_0209 248157 - 246817 - | putative integral membrane transport protein CMS_0210 248449 - 248745 + | hypothetical protein TERM 90 248769 - 248808 + T 72 -14.2 -3.41002 | overlap 248770 248773 248778 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 91 248770 - 248807 + T 73 -17.7 -2.63878 | overlap 248769 248773 248778 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 92 248773 - 248804 + T 73 -18 -2.6072 | overlap 248770 248769 248778 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 93 248778 - 248799 + T 71 -15.1 -3.10677 | overlap 248773 248770 248769 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0211 249718 - 248756 - | putative insertion element IS1121 transposase CMS_0212 250004 - 249846 - | hypothetical protein CMS_0213 250670 - 250146 - | putative acetyltransferase CMS_0214 251647 - 250679 - | putative reductase CMS_0215 251685 - 252221 + | hypothetical protein CMS_0216 252209 - 252652 + | putative cytidine deaminase CMS_0217 253279 - 252848 - | hypothetical protein CMS_0218 254503 - 253622 - | putative secreted protein TERM 94 254540 - 254579 + r 72 -14.2 -3.41002 | overlap 254541 254544 254549 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 95 254541 - 254578 + r 73 -17.7 -2.63878 | overlap 254540 254544 254549 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 96 254544 - 254575 + r 73 -18 -2.6072 | overlap 254541 254540 254549 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 97 254549 - 254570 + r 71 -15.1 -3.10677 | overlap 254544 254541 254540 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0219 255489 - 254527 - | putative insertion element IS1121 transposase CMS_0220 256060 - 255587 - | hypothetical protein CMS_0221 256080 - 257060 + | putative oxidoreductase CMS_0222 257672 - 257100 - | hypothetical protein CMS_0223 257781 - 259481 + | putative membrane-embedded two-component sensor kinase CMS_0224 259631 - 260398 + | putative two-component system phosphotransfer protein CMS_0225 261394 - 260591 - | putative two component response regulator CMS_0226 261959 - 261591 - | putative integral membrane protein CMS_0227 263053 - 262217 - | putative exonuclease CMS_0228 263520 - 263122 - | hypothetical protein CMS_0229 264158 - 263517 - | hypothetical protein CMS_0230 264709 - 264155 - | putative RNA polymerase sigma factor CMS_0231 264831 - 265295 + | hypothetical protein TERM 98 265315 - 265345 + F 79 -16.1 -3.32844 | overlap 265306 265313 CCCCGCACGCCCCGA CGGGCCGCCTTTC CTCGC GACGGGCGGCCCG TTGTCGCGTCCGGCC TERM 99 266272 - 266310 + G 77 -17.5 -3.04144 | gap 2 CGGAGGCGTCCGCGG CCG-GCC-ACGGCGGCGAC GAC GTGGCCGCCGTCGGCACGG TGTTCGGCCTGCCGG CMS_0232 265467 - 266342 + | putative dehydrogenase pyrE 266409 - 266963 + | orotate phosphoribosyltransferase CMS_0234 266963 - 269104 + | putative large membrane associated protein CMS_0235 269229 - 270539 + | putative integral membrane efflux protein CMS_0236 270536 - 271753 + | putative integral membrane efflux protein CMS_0237 271826 - 272323 + | putative integral membrane protein CMS_0238 272381 - 273418 + | putative secreted protein CMS_0239 274287 - 273490 - | putative N-acetylglucosamine-6-phosphate deacetylase CMS_0240 274417 - 275322 + | putative phosphoesterase TERM 100 275326 - 275384 + T 72 -16.2 -2.90194 | gap 3, opp_overlap 275337 275342, overlap 275336 GCCGCGCCGTGACGG --CCCGGA-CATGAGGAGAGGCGGCGACC CGTG GGTCGCCGCCTCTCCGTATGCTGCGGGGA TCTACTTGAAGACGT TERM 101 275336 - 275371 + T 93 -24.8 -2.78596 | opp_overlap 275337 275342, overlap 275326 GACGGCCCGGACATG AGGAGAGGCGGCGACC CGTG GGTCGCCGCCTCTCCG TATGCTGCGGGGATC TERM 102 275370 - 275337 - T 100 -28.3 -2.62263 | opp_overlap 275336 275326, overlap 275342 ACGGCCCGGACATGA GGAGAGGCGGCGACC CGTG GGTCGCCGCCTCTCC GTATGCTGCGGGGAT TERM 103 275365 - 275342 - T 83 -19.6 -2.84634 | opp_overlap 275336 275326, overlap 275337 CCGGACATGAGGAGA GGCGGCGACC CGTG GGTCGCCGCC TCTCCGTATGCTGCG CMS_0241 275556 - 275386 - | hypothetical protein CMS_0242 275741 - 276160 + | putative integral membrane protein CMS_0243 276249 - 278438 + | putative ATP-dependent DNA helicase CMS_0244 279458 - 278454 - | putative DNA methylase CMS_0245 279634 - 280878 + | hypothetical protein TERM 104 281407 - 281441 + G 77 -17.8 -3.02511 | TCGCGGCAGCCGTCT CCGAGAGCCTTCCGCG GAG CGAGGGCGGCTCTCGG TCTTCCGCGGCTCCG CMS_0246 281031 - 281936 + | hypothetical protein TERM 105 281947 - 281982 + F 77 -19 -2.74523 | overlap 281943 AGTAGCGACGGAGCT CGAGAGCCGTGGCACC TCCG GGTGCCACGGCTCGCA TCGTCTTCCGGCTGG CMS_0247 282015 - 283247 + | putative hydrolase CMS_0248 284378 - 283284 - | putative oxidoreductase CMS_0249 284562 - 286817 + | glycerol transferase CMS_0250 286814 - 288139 + | putative glycosyl transferase CMS_0251 288281 - 288454 + | putative small membrane protein CMS_0252 288525 - 290225 + | hypothetical protein CMS_0253 290225 - 291160 + | hypothetical protein CMS_0254 291157 - 292002 + | hypothetical protein CMS_0256 292856 - 293359 + | putative acetyltransferase CMS_0257 294187 - 293432 - | putative integral membrane protein CMS_0261 299115 - 297199 - | putative peptidase TERM 106 299368 - 299333 - R 100 -29.8 -2.62184 | GCCCGCCGCACATGA CGAGGCGGCGGGCTGG AGAG CCAGCCCGCCGCCCCG CGTCCCGGTCAGGCG CMS_0262 300089 - 299400 - | putative secreted protein CMS_0263 300329 - 301054 + | TetR family transcriptional regulator CMS_0264 303383 - 301122 - | putative phospholipase C CMS_0265 304149 - 303592 - | hypothetical protein CMS_0266 304969 - 304289 - | putative integral membrane protein CMS_0267 305997 - 305035 - | putative insertion element ISCmi2 transposase TERM 107 306050 - 306001 - R 70 -14.5 -3.18383 | gap 2, opp_overlap 306001 AGCGTGAGTCACGAA GACCTCCGTGGACGTTGATGAGT GTGGTA ACCCA-CATCGTCC-CGGAGGTC TTCGCTATCCGCCCC CMS_0268 306788 - 306138 - | putative hydrolase rpoB 307113 - 310601 + | DNA-directed RNA polymerase beta chain rpoC 310650 - 314549 + | DNA-directed RNA polymerase beta' chain TERM 108 314576 - 314605 + F 77 -19.3 -2.71011 | opp_overlap 314549 314580, overlap 314580 CGTGAGCGCACGATG AGAAGGGCCCCGC TCCG GCGGGGCCCTTCC TCGTTGACGGGGCGT TERM 109 314601 - 314580 - f 86 -18.7 -3.44229 | opp_overlap 314576 314580, overlap 314549 AGCGCACGATGAGAA GGGCCCCGC TCCG GCGGGGCCC TTCCTCGTTGACGGG TERM 110 314580 - 314601 + F 84 -18.7 -3.27298 | opp_overlap 314549 314580, overlap 314576 AGCGCACGATGAGAA GGGCCCCGC TCCG GCGGGGCCC TTCCTCGTTGACGGG CMS_0271 314619 - 315221 + | hypothetical protein CMS_0272 315292 - 316275 + | putative extracellular solute-binding transport protein CMS_0273 316320 - 316985 + | putative integral membrane transport protein CMS_0274 317116 - 317811 + | putative ATP-binding ABC transport protein CMS_0275 317885 - 318787 + | putative integral membrane protein CMS_0276 318831 - 319232 + | putative integral membrane protein CMS_0277 319497 - 319871 + | 30S ribosomal protein S12 CMS_0278 319871 - 320341 + | 30S ribosomal protein S7 TERM 111 321492 - 321459 - g 86 -16.1 -3.68936 | GACCAAGGGCAAGAA GGAGCGCATCGGGAA GATC TTCCAGATGCACTCC AACAAGGAGAACCCG CMS_0279 320389 - 322503 + | elongation factor G CMS_0280 322618 - 323811 + | elongation factor Tu-1 TERM 112 323842 - 323866 + F 86 -17.1 -3.57561 | GCACCACCTCCGAGA GGGTCGGGCCG TCA TGGCCCGGCCC TTTCGGCCGTTAAGA CMS_0281 323961 - 324929 + | hypothetical protein TERM 113 325609 - 325581 - g 76 -15.3 -3.35996 | GATGCGCACGCACAA GCGTCTGATCGAC ATC GTCGACCCGACGC CGAAGGCGGTCGACT CMS_0282 325369 - 325677 + | 30S ribosomal protein S10 CMS_0283 325686 - 326339 + | 50S ribosomal protein L3 CMS_0284 326342 - 326998 + | 50S ribosomal protein L4 rplW 326995 - 327294 + | 50s ribosomal protein l23 CMS_0286 327317 - 328156 + | 50S ribosomal protein L2 TERM 114 328243 - 328189 - g 72 -11.5 -3.63694 | opp_overlap 328210, overlap 328190 ACGCAGTCTGAAGAA GGGCCCCTTCGTCGACGACCACC-TGC TCC GCAAGGTGATC-TCGGCGAACGAGGCC AGCAGCAAGAACGTG CMS_0287 328169 - 328450 + | 30S ribosomal protein S19 CMS_0288 328476 - 328868 + | 50S ribosomal protein L22 CMS_0289 328868 - 329665 + | 30S ribosomal protein S3 CMS_0290 329668 - 330087 + | 50S ribosomal protein L16 rpmC 330087 - 330413 + | 50s ribosomal protein l29 CMS_0292 330410 - 330712 + | 30S ribosomal protein S17 CMS_0293 330723 - 331109 + | 50S ribosomal protein L14 CMS_0294 331112 - 331471 + | 50S ribosomal protein L24 CMS_0295 331474 - 332070 + | 50S ribosomal protein L5 CMS_0296 332236 - 332607 + | 30S ribosomal protein S8 CMS_0297 332612 - 333148 + | 50S ribosomal protein L6 TERM 115 333206 - 333176 - g 87 -6.6 -4.81551 | overlap 333180 GAGTTAGAGGAAAAA GCAAGTCCGCCGCC CGC GGCCGCAGGCACGC ACGTCTGCGCAAGAA CMS_0298 333145 - 333522 + | 50S ribosomal protein L18 CMS_0299 333564 - 334223 + | 30S ribosomal protein S5 CMS_0300 334223 - 334405 + | 50S ribosomal protein L30 rplO 334438 - 334983 + | 50s ribosomal protein l15 TERM 116 335034 - 334999 - f 100 -28.4 -3.09834 | overlap 335019 CACTTCAGGACGCAA CGGCAGGGGCGGTCGG GAAA CCGACCGCCCCTACCG GCACCTGGGGCCGCA CMS_0302 335109 - 336431 + | preprotein translocase SecY subunit CMS_0303 336428 - 337030 + | adenylate kinase CMS_0304 337035 - 337871 + | methionine aminopeptidase licR 339899 - 337920 - | putative PTS system antitermination regulator CMS_0306 340111 - 340491 + | putative PTS system sugar-binding IIB component ptsH 340603 - 340869 + | putative phosphocarrier protein HPr component (histidine-containing protein) ptsI 340932 - 342536 + | phosphoenolpyruvate-protein phosphotransferase mtlA 342666 - 344195 + | PTS system, phosphotransferase enzyme II, ABC component TERM 117 344707 - 344679 - g 72 -14.5 -3.31792 | CGACGAGGTGCAGAA GCTCCTCGACGCC CCG GACGCCGAGGCGC TGTACGCCCTCCTGG mtlF 344305 - 344742 + | PTS system, phosphotransferase enzyme II, A component mtlD 344739 - 345908 + | mannitol-1-phosphate 5-dehydrogenase infA 346161 - 346382 + | translation initiation factor IF-1 CMS_0313 346455 - 346568 + | 50S ribosomal protein L36 CMS_0314 346724 - 347098 + | 30S ribosomal protein S13 CMS_0315 347144 - 347542 + | 30S ribosomal protein S11 TERM 118 347548 - 347606 + F 81 -19 -2.94912 | gap 3 CCGCGTCTAGCTCGC --GCTGATCGGCCGCTGCCGTCCCGCTCC GTCA GGAG-GGGACGGCGTCGGCCGATCCGCCG TGTGTCCGTTCGACC CMS_0316 347704 - 348699 + | DNA-directed RNA polymerase alpha chain CMS_0317 348752 - 349315 + | 50S ribosomal protein L17 TERM 119 349334 - 349360 + F 72 -16.5 -2.80816 | CGCACCACCCTGAGA GCCCCCGCCGC CCTGC GCGTCGGGGGC TCTCGTGCGTCCGGG CMS_0318 349435 - 350505 + | putative N-acetyltransferase CMS_0319 350535 - 351506 + | putative pseudouridylate synthase CMS_0320 351585 - 352103 + | 50S ribosomal protein L13 CMS_0321 352154 - 352639 + | 30S ribosomal protein S9 TERM 120 353557 - 353529 - g 70 -14.5 -3.21416 | overlap 353530 GACGGTCATGAGCAA CCTCGGCCTCCGC ATC GCGATGGCCGAGA ACGACATCACGGTGC CMS_0322 352663 - 354012 + | putative phospho-sugar mutase CMS_0323 354971 - 354009 - | putative insertion element ISCmi2 transposase TERM 121 355024 - 354975 - H 70 -14.5 -3.18383 | gap 2, opp_overlap 354975 AGCGTGAGTCACGAA GACCTCCGTGGACGTTGATGAGT GTGGTA ACCCA-CATCGTCC-CGGAGGTC TTCGCTATCCGCCCC TERM 122 356119 - 356080 - g 72 -14.2 -3.41002 | overlap 356081 356084 356089 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 123 356118 - 356081 - g 73 -17.7 -2.63878 | overlap 356080 356084 356089 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 124 356115 - 356084 - g 73 -18 -2.6072 | overlap 356081 356080 356089 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 125 356110 - 356089 - g 71 -15.1 -3.10677 | overlap 356084 356081 356080 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_0324 355170 - 356132 + | putative insertion element IS1121 transposase TERM 126 356634 - 356593 - g 72 -16.6 -2.82987 | gap 1, overlap 356584 356615 CGAAGACGGACGAGA CCCGTCAGCGCCGCGTG GAGAAGGCG CTCGCGGCGCTG-CGGG GCTGACGCGGACGAC CMS_0325 356199 - 356639 + | hypothetical protein CMS_0326 356904 - 356668 - | putative DNA-binding protein CMS_0327 357500 - 356904 - | putative integral membrane protein CMS_0328 358009 - 357629 - | hypothetical protein CMS_0329 359301 - 358507 - | hypothetical protein CMS_0331 360948 - 360610 - | hypothetical protein CMS_0332 361289 - 362263 + | putative hydrolase CMS_0333 362260 - 363288 + | putative hydrolase CMS_0334 363507 - 364277 + | hypothetical protein CMS_0335 364308 - 365240 + | putative ABC-transport protein, ATP-binding component CMS_0336 365237 - 366226 + | binding-protein-dependent transport lipoprotein CMS_0337 366241 - 368397 + | putative integral membrane transport protein CMS_0338 369396 - 370919 + | putative two-component system sensor kinase CMS_0339 370916 - 371608 + | putative two-component system response regulator CMS_0340 372827 - 371625 - | putative integral membrane protein CMS_0341 373126 - 373638 + | putative integral membrane protein CMS_0342 373687 - 374091 + | putative tautomerase CMS_0343 374627 - 374115 - | putative acetyltransferase CMS_0344 375741 - 374659 - | hypothetical protein CMS_0345 377481 - 375787 - | metallo-beta-lactamase family hydrolase CMS_0346 377975 - 379507 + | putative integral membrane sulphate transporter CMS_0347 379853 - 379662 - | hypothetical protein TERM 127 380952 - 380970 + Gr 74 -16 -3.14132 | GCAGCTGTCCCGCGC GGTCGCGC AGG GCGCGACC TTCCTCGCGAGCGGA CMS_0349 382498 - 381221 - | hypothetical protein CMS_0348 379969 - 381348 + | putative aldehyde dehydrogenase CMS_0350 383149 - 382847 - | hypothetical protein CMS_0351 383239 - 384447 + | putative aminotransferase TERM 128 384899 - 384935 + G 84 -15.8 -3.78934 | gap 1 CGCCCGCGAGCTCGC CGTGCAGGCCGGTCGCG GCCT CGCGCCCG-CCGGCACG TTCTTCTCCGCGGCG CMS_0352 384459 - 385646 + | putative methyltransferase CMS_0353 385733 - 387031 + | putative o-acetylhomoserine TERM 129 387634 - 387672 + GT 70 -13.9 -3.28712 | gap 1 TTCGTGCCGCCTCCG GAGGGCGAGGTCCGTCGG CTCC TCGACG-ATCTCGCCCGC TTCTGCACGGACACG CMS_0355 389228 - 388428 - | TetR family transcriptional regulator CMS_0354 387109 - 388482 + | hypothetical protein CMS_0356 389249 - 390769 + | putative integral membrane transport protein CMS_0357 390864 - 391718 + | putative hydrolase CMS_0358 391711 - 392301 + | TetR family transcriptional regulator CMS_0359 393244 - 392312 - | hypothetical protein TERM 130 392643 - 392587 - G 81 -20 -2.62184 | gap 1 GCGCGCCCGAGAGGA GCGGCCCGGCCA-CGCTGCTCACGGCG GCGC CGCCGGCCACCGCGATGGCCAGGCCGC CGAGCGCCGCGACCC CMS_0360 393946 - 393344 - | TetR family transcriptional regulator CMS_0361 394206 - 395306 + | putative oxidoreductase CMS_0362 395303 - 396115 + | hypothetical protein CMS_0363 396170 - 397492 + | putative solute-binding lipoprotein TERM 131 398291 - 398318 + G 73 -4.9 -4.42386 | gap 1, overlap 398292 ATCATCTCCCGCACC ACGTACATCAGC TGGGT GCTGATG-ACGA TTTTCTGCGTCAACG CMS_0364 397544 - 398530 + | putative integral membrane transport protein CMS_0365 398527 - 399408 + | putative integral membrane transport protein CMS_0366 399830 - 399486 - | hypothetical protein CMS_0367 400291 - 399833 - | hypothetical protein CMS_0368 402187 - 400301 - | putative hydrolase CMS_0370 406173 - 403540 - | putative integral membrane protein CMS_0371 406235 - 406822 + | TetR family transcriptional regulator CMS_0372 408645 - 406825 - | hypothetical protein CMS_0373 410023 - 409076 - | putative integral membrane transport protein CMS_0374 410921 - 410016 - | putative integral membrane transport protein CMS_0376 412525 - 413967 + | hypothetical protein TERM 132 415181 - 415141 - g 72 -14 -3.40403 | gap 1, overlap 415144 TCCCGTGGACTACAA GAAGCTCG-AGGTGGGCGC CCAC GCGCTCACCGGCGAGCTCC AGCCGATCTCGCTCT TERM 133 415178 - 415144 - g 76 -12.1 -3.84406 | gap 1, overlap 415141 CGTGGACTACAAGAA GCTCG-AGGTGGGCGC CCAC GCGCTCACCGGCGAGC TCCAGCCGATCTCGC CMS_0377 413969 - 415204 + | putative dehydrogenase CMS_0378 415201 - 416325 + | hypothetical protein CMS_0379 416514 - 417428 + | putative integral membrane phophoesterase CMS_0380 417755 - 418165 + | putative secreted protein CMS_0381 418256 - 418678 + | hypothetical protein CMS_0382 418828 - 418697 - | hypothetical protein CMS_0383 419971 - 419042 - | hypothetical protein TERM 134 420072 - 420060 - R 73 -5.5 -4.27443 | CGATCATTAAAACAA GTCGC GCA GCAAC GGCGCTCAGACATTC CMS_0384 421010 - 420078 - | putative ATP-binding protein TERM 135 420485 - 420501 + g 82 -3.5 -4.78764 | CTGAGAACCTGTCGA CGAGGTC GTA GTCCGCG TTTTTCATCCGTTTG CMS_0385 421918 - 421019 - | putative bacteriophage protein CMS_0386 423094 - 422030 - | putative monooxygenase CMS_0387 423329 - 423174 - | hypothetical protein CMS_0388 423399 - 423743 + | hypothetical protein CMS_0389 423895 - 423740 - | hypothetical protein CMS_0390 424541 - 423966 - | TetR family transcriptional regulator CMS_0391 424639 - 425760 + | putative dehydrogenase TERM 136 426807 - 426768 - g 72 -14.2 -3.41002 | overlap 426769 426772 426777 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 137 426806 - 426769 - g 73 -17.7 -2.63878 | overlap 426768 426772 426777 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 138 426803 - 426772 - g 73 -18 -2.6072 | overlap 426769 426768 426777 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 139 426798 - 426777 - g 71 -15.1 -3.10677 | overlap 426772 426769 426768 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_0392 425858 - 426820 + | putative insertion element IS1121 transposase CMS_0393 427600 - 426839 - | hypothetical protein TERM 140 427045 - 426989 - G 84 -18.8 -3.24188 | gap 1, overlap 426992 CGAGAGGACGAGGAA CGAGGCACATGCCACGCTCGTGACGGC GGCG GCCGTCACGAGGGCGCCAT-TGCCCAG CATCACCTTCCACAG TERM 141 427042 - 426992 - G 84 -21.3 -2.80492 | gap 1, overlap 426989 GAGGACGAGGAACGA GGCACATGCCACGCTCGTGACGGC GGCG GCCGTCACGAGGGCGCCAT-TGCC CAGCATCACCTTCCA CMS_0395 429036 - 428188 - | hypothetical protein CMS_0396 429146 - 429751 + | putative oxidoreductase CMS_0397 430272 - 429865 - | putative integral membrane protein CMS_0398 430504 - 431952 + | putative beta-lactamase CMS_0399 431970 - 433313 + | putative phosphatase CMS_0400 435272 - 433392 - | putative secreted amidase CMS_0401 435579 - 435397 - | putative DNA-binding protein CMS_0402 435707 - 436426 + | putative RNA-binding protein CMS_0403 437527 - 436514 - | putative sigma factor CMS_0404 437782 - 439314 + | putative cationic amino acid transporter CMS_0405 440212 - 439409 - | DNA glycosylase CMS_0406 445843 - 440240 - | putative ATP-dependent DNA helicase TERM 142 444441 - 444413 - G 71 -15.9 -3.14132 | GCGCCCGCCGAGGAA CCGCGCGACCTCC TCG GGCGGCCGCACGG TGGCGGACAGCCCGA CMS_0407 445954 - 446508 + | hypothetical protein CMS_0408 447178 - 446555 - | TetR family transcriptional regulator CMS_0410 448898 - 447357 - | putative DEAD-box RNA helicase TERM 143 447642 - 447693 + g 70 -14.3 -3.25823 | gap 1, overlap 447636 447642 CTGCGAGCGTCCGCC GCCG-TTCGCGCGGCCGCCCTGCG ACTGG CGCTGGGTGGTCTCGCGGACCGAC TTCGTCTCGCGCGGC CMS_0411 449784 - 449137 - | hypothetical protein CMS_0412 450413 - 449838 - | hypothetical protein CMS_0413 450462 - 450983 + | hypothetical protein CMS_0414 450967 - 451557 + | hypothetical protein CMS_0415 451671 - 451973 + | hypothetical protein CMS_0416 452691 - 451987 - | hypothetical protein CMS_0417 453173 - 452688 - | putative bacteriophage protein CMS_0418 453758 - 453228 - | hypothetical protein CMS_0419 454953 - 453769 - | putative secreted oxidoreductase CMS_0420 455788 - 455000 - | hypothetical protein CMS_0421 456829 - 455867 - | putative insertion element ISCmi2 transposase TERM 144 456882 - 456833 - H 70 -14.5 -3.18383 | gap 2, opp_overlap 456833 AGCGTGAGTCACGAA GACCTCCGTGGACGTTGATGAGT GTGGTA ACCCA-CATCGTCC-CGGAGGTC TTCGCTATCCGCTCA TERM 145 457659 - 457693 + G 73 -15 -3.29144 | gap 1, opp_overlap 457655 457674 CAGCGGCAAGATCGG CGGCGC-GGCGCAGA AGCGGC TCGGCGCCGGCGCCG TTCTGCACCACGTCA CMS_0422 456940 - 457989 + | putative lipoate-protein ligase CMS_0423 458532 - 458248 - | hypothetical protein CMS_0424 458556 - 459533 + | hypothetical protein CMS_0425 460020 - 459541 - | putative integral membrane protein pgm 461779 - 460103 - | phosphoglucomutase TERM 146 461245 - 461294 + g 70 -13.5 -3.35996 | gap 1, overlap 461249 461278 TGGCGTCGGAGTCGG CGGGCCCGCCGTGCGGCGGGTT GTACTTG AAGCCGCCGT-CGGCGGGCGGG TTGTGGCTGGGGGTC TERM 147 461960 - 461915 - g 72 -11.7 -3.61398 | gap 1, overlap 461916 GCGCGCGGTCAACAA CGCGTCGGAGGCGCTCGCCGAC GTC GTCGCCG-GCACCTCGGTCGCC GCCATGATCGCCATC pheA 461793 - 462761 + | prephenate dehydratase CMS_0428 464014 - 462758 - | putative amino acid transporter CMS_0429 464259 - 465539 + | seryl-tRNA synthase CMS_0430 465536 - 466357 + | hypothetical protein CMS_0431 466620 - 467879 + | putative secreted protein CMS_0432 468453 - 469019 + | hypothetical protein TERM 148 469064 - 469113 + F 70 -14.5 -3.18383 | gap 2, opp_overlap 469064 GGGGCGGATAGCGAA GACCTCCG-GGACGATG-TGGGT TACCAC ACTCATCAACGTCCACGGAGGTC TTCGTGACTCACGCT CMS_0433 469117 - 470079 + | putative insertion element ISCmi2 transposase CMS_0434 470156 - 471244 + | LacI family transcriptional regulator CMS_0435 471416 - 472114 + | hypothetical protein CMS_0436 472132 - 473208 + | putative oxidoreductase CMS_0437 473300 - 473647 + | hypothetical protein CMS_0438 475048 - 473693 - | putative alpha amylase TERM 149 474433 - 474401 - G 74 -16.9 -3.14344 | CATCTCGCCGACGAA CCACGCGTCCGGGTG CCG CTCGCGGACGCGCGG CAGCACGGCCGCCCA TERM 150 475386 - 475346 - R 83 -19.7 -2.87132 | opp_overlap 475351 475351, overlap 475349 475350 TCTCTGGTTGAGACA GAATGCCGAACGGCCCGCC ACT GGCGGGCCGTTCGCGTTTC CCCGGGTCGGTCATC TERM 151 475382 - 475349 - R 93 -18.9 -3.58726 | gap 1, opp_overlap 475351 475351, overlap 475346 475350 CTGGTTGAGACAGAA TGCCGAACGGCCCGCC ACT GGCGGGCCGTTCG-CG TTTCCCCGGGTCGGT TERM 152 475381 - 475350 - R 87 -22.4 -2.75022 | gap 1, opp_overlap 475351 475351, overlap 475349 475346 TGGTTGAGACAGAAT GCCGAACGGCCCGCC ACT GGCGGGCCGTTCG-C GTTTCCCCGGGTCGG TERM 153 475351 - 475382 + r 100 -22.4 -3.54543 | gap 1, opp_overlap 475350 475349 475346, overlap 475351 GGTTGAGACAGAATG C-CGAACGGCCCGCC ACT GGCGGGCCGTTCGCG TTTCCCCGGGTCGGT TERM 154 475351 - 475381 + r 87 -22.6 -2.72511 | opp_overlap 475350 475349 475346, overlap 475351 GGTTGAGACAGAATG CCGAACGGCCCGCC ACT GGCGGGCCGTTCGC GTTTCCCCGGGTCGG CMS_0440 476748 - 475684 - | hypothetical protein CMS_0441 477161 - 476745 - | PadR family transcriptional regulator CMS_0442 477274 - 477675 + | putative integral membrane protein CMS_0443 477779 - 478546 + | putative integral membrane protein CMS_0444 478656 - 479519 + | hypothetical protein CMS_0445 479632 - 480174 + | putative hydophilic protein TERM 155 480198 - 480237 + T 72 -14.2 -3.41002 | overlap 480199 480202 480207 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 156 480199 - 480236 + T 73 -17.7 -2.63878 | overlap 480198 480202 480207 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 157 480202 - 480233 + T 73 -18 -2.6072 | overlap 480199 480198 480207 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 158 480207 - 480228 + T 71 -15.1 -3.10677 | overlap 480202 480199 480198 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0446 481147 - 480185 - | putative insertion element IS1121 transposase TERM 159 481454 - 481403 - g 71 -13 -3.44527 | gap 1, opp_overlap 481412 GACCGACCACGAGAA GTCGATCCGGGTGATCCACCGCGCC ATC GACGCCG-GGATCACCTTCATCGAC ACCGCCGACATCTAC CMS_0447 481284 - 482318 + | putative aldoketoreductase TERM 160 482740 - 482722 - g 72 -12.4 -3.63515 | CTTCATGGCGAAGAA GGGCGCGT TCG ACACGCCC GGCGTGGGCTGGGTC CMS_0448 482522 - 483271 + | putative acetyl transferase TERM 161 483333 - 483295 - T 87 -20.2 -3.05463 | opp_overlap 483286, overlap 483300 AGGGCCCTGAGGGAA TGAGACCGGCCCGGGCCT TCG AGGCCCGGGCCGGACTGC GCACGTGAACGTCTG TERM 162 483328 - 483300 - T 100 -27.5 -2.92192 | opp_overlap 483286, overlap 483295 CCTGAGGGAATGAGA CCGGCCCGGGCCT TCG AGGCCCGGGCCGG ACTGCGCACGTGAAC CMS_0449 484050 - 483565 - | L-aspartate-alpha-decarboxylase TERM 163 485299 - 485246 - g 81 -14.3 -3.8211 | gap 1, overlap 485247 CGTCAGCGACAAGAA GGCCGC-CGCGGAGCGCGAGGACGTG AAG CGCGGCCGCGGGATCCGCGAGCGGCA TGAGCGTGCCGAGCG TERM 164 485298 - 485247 - g 76 -17.8 -2.88945 | gap 1, overlap 485246 GTCAGCGACAAGAAG GCCGC-CGCGGAGCGCGAGGACGTG AAG CGCGGCCGCGGGATCCGCGAGCGGC ATGAGCGTGCCGAGC CMS_0450 484260 - 485351 + | putative integral membrane protein CMS_0451 486920 - 485394 - | putative deoxyribodipyrimidine photolyase TERM 165 486946 - 486992 + r 82 -20 -2.74523 | overlap 486943 TAGGACGGCGCCCGG CGGGCGACCGGGGCGTGGTCGC TGC GCGAGCACCCCTCGGCGGCCCG TAATATTGCACATGG TERM 166 488482 - 488521 + r 72 -14.2 -3.41002 | overlap 488483 488486 488491 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 167 488483 - 488520 + r 73 -17.7 -2.63878 | overlap 488482 488486 488491 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 168 488486 - 488517 + r 73 -18 -2.6072 | overlap 488483 488482 488491 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 169 488491 - 488512 + r 71 -15.1 -3.10677 | overlap 488486 488483 488482 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0453 489431 - 488469 - | putative insertion element IS1121 transposase CMS_0454 490365 - 489529 - | putative integral membrane protein CMS_0455 490860 - 490501 - | putative integral membrane protein CMS_0456 491435 - 490887 - | putative integral membrane protein CMS_0457 492122 - 491478 - | putative lipolytic enzyme CMS_0458 493013 - 492309 - | putative turgor pressure regulator CMS_0459 495406 - 493010 - | putative turgor pressure sensor CMS_0460 496186 - 495578 - | putative cation transport ATPase component kdpB 498372 - 496219 - | putative cation transport ATPase component CMS_0462 500045 - 498369 - | putative cation transport ATPase component CMS_0463 500325 - 500146 - | hypothetical protein CMS_0464 500752 - 500429 - | hypothetical protein CMS_0465 502169 - 500847 - | hypothetical protein CMS_0466 502431 - 502162 - | putative DNA-binding protein CMS_0467 503309 - 502509 - | putative integral membrane protein TERM 170 502758 - 502704 - G 77 -12.6 -3.71848 | opp_overlap 502724, overlap 502701 CTGCGGGATGAAGAA CGCGAGCGCCCCGAGGTTGGTCGCGA CGT TCACGATCTTCGCCTTGGCGCTCGCG AGCACGAAGTCGTAG CMS_0468 503943 - 503317 - | hypothetical protein CMS_0469 504445 - 505146 + | putative regulatory protein CMS_0470 505197 - 505925 + | hypothetical protein CMS_0471 506598 - 505957 - | putative hydrolase CMS_0472 506847 - 507347 + | hypothetical protein TERM 171 507538 - 507567 + T 93 -25.1 -2.62616 | opp_overlap 507499, overlap 507542 AGCCCGGCATCCGCG CGAAGGGCCCCGG GAGA CCGGGGCCCTTCG TCGTGTGCGGGGTCG TERM 172 507542 - 507563 + T 84 -18.7 -3.24747 | opp_overlap 507499, overlap 507538 CGGCATCCGCGCGAA GGGCCCCGG GAGA CCGGGGCCC TTCGTCGTGTGCGGG CMS_0473 508223 - 507603 - | putative two component response regulator CMS_0474 509398 - 508220 - | putative two component sensor kinase CMS_0475 509446 - 510669 + | putative ABC transport integral membrane protein CMS_0476 510666 - 511394 + | putative ABC transport ATP-binding protein CMS_0477 512510 - 511860 - | hypothetical protein CMS_0478 513452 - 512610 - | hypothetical protein CMS_0479 514029 - 513436 - | hypothetical protein TERM 173 514270 - 514288 + r 71 -5.2 -4.30576 | ATCGTCGTCTCCACA GCGGGC AGGTCGA GCTCGC TTTTGGTCGTGCGCG TERM 174 514505 - 514544 + r 72 -14.2 -3.41002 | overlap 514506 514509 514514 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 175 514506 - 514543 + r 73 -17.7 -2.63878 | overlap 514505 514509 514514 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 176 514509 - 514540 + r 73 -18 -2.6072 | overlap 514506 514505 514514 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 177 514514 - 514535 + r 71 -15.1 -3.10677 | overlap 514509 514506 514505 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0481 515454 - 514492 - | putative insertion element IS1121 transposase CMS_0483 518290 - 517922 - | GntR family transcriptional regulator CMS_0484 518414 - 518785 + | putative integral emmbrane protein CMS_0485 519701 - 518796 - | putative integral membrane protein TERM 178 519716 - 519706 - R 71 -6.8 -4.16842 | overlap 519689 GCTATCGCCAAGAAA GCGA TGG TCGC CCTGTCGATGCTCTC CMS_0486 520395 - 519958 - | AsnC family transcriptional regulator CMS_0487 520474 - 521421 + | putative amidinotransferase CMS_0488 521418 - 522707 + | ornithine aminotransferase CMS_0489 523490 - 523948 + | putative secreted protein CMS_0490 524042 - 524458 + | putative secreted protein CMS_0491 525434 - 524550 - | putative epimerase/dehydratase CMS_0492 525862 - 525431 - | hypothetical protein CMS_0493 526317 - 525859 - | putative integral membrane transport protein TERM 179 527108 - 527063 - g 87 -22.5 -2.70932 | GTCGCTCGGCAAGCA GGCGTCCGTGGCGAAGGAGGC GCTC GCCGCCCTCGCCGCCGACGCC GAGGCCAAGCTGCAG CMS_0494 526545 - 527819 + | putative secreted protein CMS_0495 527856 - 528596 + | hypothetical protein CMS_0496 528763 - 529218 + | hypothetical protein CMS_0497 529221 - 529457 + | hypothetical protein TERM 180 529465 - 529515 + F 82 -18.9 -3.06696 | gap 1, opp_overlap 529460 AGGGATAGCACGCGC GCACGACGGGCGGATCCGGGACGC GAGA GCGGCCCG-ACCCGCCCGTCGCCC TGTGTTGACGCAGCA CMS_0498 529746 - 530072 + | hypothetical protein CMS_0499 530286 - 530636 + | hypothetical protein CMS_0500 530689 - 531864 + | putative oxidoreductase CMS_0501 532633 - 531911 - | putative two-component system response regulator CMS_0502 533775 - 532630 - | putative two-component system sensor kinase CMS_0503 534303 - 533947 - | putative integral membrane protein CMS_0504 535012 - 534395 - | TetR family transcriptional regulator CMS_0505 535259 - 536638 + | putative integral membrane transport protein CMS_0508 538882 - 537821 - | putative monooxygenase CMS_0509 539892 - 538927 - | putative quinone oxidoreductase CMS_0510 540553 - 539924 - | putative integral membrane protein CMS_0511 541242 - 540553 - | putative secreted protein CMS_0512 541488 - 542441 + | cysteine synthase cysE 542444 - 543028 + | serine acetyltransferase spoU 543028 - 543684 + | tRNA/rRNA methyltransferase CMS_0515 543785 - 544363 + | hypothetical protein CMS_0516 545322 - 544360 - | putative insertion element ISCmi2 transposase TERM 181 545375 - 545326 - R 70 -14.5 -3.18383 | gap 2, opp_overlap 545326 AGCGTGAGTCACGAA GACCTCCGTGGACGTTGATGAGT GTGGTA ACCCA-CATCGTCC-CGGAGGTC TTCGCTATCCGCCCC coaA 546471 - 545512 - | putative pantothenate kinase glmS 546560 - 548410 + | glucosamine--fructose-6-phosphate aminotransferase acpS 548421 - 548780 + | putative holo-[acyl-carrier protein] synthase TERM 182 549763 - 549812 + G 73 -17.1 -3.03124 | overlap 549766 CGTGGTCGACGTGGG CGACGGCGTCGTCGACGGCCG GCCCGTCG CGGTGGGCGACGACGCCGTCC TGTTCGGGGATCCCG TERM 183 549766 - 549809 + G 74 -17.4 -2.74192 | overlap 549763 GGTCGACGTGGGCGA CGGCGTCGTCGACGGCCG GCCCGTCG CGGTGGGCGACGACGCCG TCCTGTTCGGGGATC alr 548777 - 549934 + | alanine racemase alr* 549931 - 551667 + | putative alanine racemase fusion protein CMS_0522 551677 - 552294 + | hypothetical protein CMS_0523 552291 - 553910 + | putative glycoprotein peptidase-acetyltransferase fusionprotein CMS_0524 554015 - 554440 + | putative integral membrane protein CMS_0525 555771 - 554530 - | hypothetical protein CMS_0526 555845 - 556174 + | 10 kD chaperonin cpn10 TERM 184 556216 - 556241 + F 76 -17.6 -2.80816 | CCGCACCACCCGGGA GCCCGGCCGA CACGAT TCGGCCGGGC TCTCGTGCGTCCGCG TERM 185 556865 - 556825 - g 72 -12.4 -3.61398 | gap 1 CGGGCTGGTGAAGAA GCGCGTGAGCGG-GGGCGC GGAC GCGCTCTCCGGCCTCGCGC TCGAGACCGCGTGGC CMS_0527 556307 - 557260 + | putative integral membrane protein CMS_0528 557439 - 558719 + | putative extracellular ligand-binding protein TERM 186 558814 - 558843 + T 83 -20.1 -2.80816 | gap 1, opp_overlap 558814 GCACCCCGGACACGA CGACGCGGCA-CCC CGG GGGATGCCGCGTCG TGTCGTGCGTGAGCC TERM 187 558843 - 558814 - T 83 -21.5 -2.62616 | opp_overlap 558814 GCACCCCGGACACGA CGACGCGGCACCC CGGG GGATGCCGCGTCG TGTCGTGCGTGAGCC CMS_0529 559540 - 558863 - | putative branched chain amino acid transport ATP-binding protein CMS_0530 560541 - 559618 - | putative branched chain amino acid transport ATP-binding protein CMS_0531 561505 - 560534 - | putative integral membrane transport protein CMS_0532 562912 - 561512 - | putative integral membrane transport protein CMS_0533 563210 - 564712 + | inosine-5'-monophosphate dehydrogenase TERM 188 564924 - 564951 + G 71 -13.4 -3.49618 | gap 1, opp_overlap 564890, overlap 564932 CCGTCCGCTCGAGGC CGCGACCCTCGGG CCA CCCG-GGGTGGCG TTGATTCTCTCGGGG CMS_0534 564880 - 565980 + | hypothetical protein CMS_0535 565973 - 567091 + | putative inosine-5'-monophosphate dehydrogenase CMS_0536 567193 - 567726 + | hypothetical protein CMS_0537 567730 - 569253 + | putative integral membrane transport protein CMS_0538 569253 - 570242 + | hypothetical protein CMS_0539 570252 - 570794 + | putative integral membrane protein CMS_0540 570791 - 572371 + | GMP synthase TERM 189 572434 - 572403 - f 86 -22.4 -2.62184 | opp_overlap 572407, overlap 572407 CCGGCGCTGACACGA CGAAGGCCGCTCCC CTCG GGGAGCGGCCTTCA TCGTGCTGCCGGTCC TERM 190 572430 - 572407 - f 89 -19.6 -3.24747 | opp_overlap 572407, overlap 572403 CGCTGACACGACGAA GGCCGCTCCC CTCG GGGAGCGGCC TTCATCGTGCTGCCG TERM 191 572407 - 572430 + F 89 -19.6 -3.23216 | opp_overlap 572403 572407 CGCTGACACGACGAA GGCCGCTCCC CTCG GGGAGCGGCC TTCATCGTGCTGCCG CMS_0542 573417 - 574475 + | putative glycerophosphoryl diester phosphodiesterase TERM 192 574499 - 574538 + T 72 -14.2 -3.41002 | overlap 574500 574503 574508 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 193 574500 - 574537 + T 73 -17.7 -2.63878 | overlap 574499 574503 574508 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 194 574503 - 574534 + T 73 -18 -2.6072 | overlap 574500 574499 574508 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 195 574508 - 574529 + T 71 -15.1 -3.10677 | overlap 574503 574500 574499 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0543 575448 - 574486 - | putative insertion element IS1121 transposase CMS_0544A 576060 - 576278 + | hypothetical protein TERM 196 576323 - 576376 + G 83 -21.2 -2.64616 | gap 2 ACTCGGTGAGTCCCC GCT-ACG-CCGTCAGGGAGGTGGAGG ACAC CCTCCACCTCCTCGGCGGTCGTGAGC TGGTCTCCCTGCAGC CMS_0545 576289 - 577200 + | hypothetical protein CMS_0546 577197 - 578459 + | hypothetical protein CMS_0547 578518 - 579486 + | hypothetical protein CMS_0548 579479 - 580435 + | putative ABC transporter ATP-binding protein CMS_0550 581325 - 582389 + | hypothetical protein TERM 197 584507 - 584467 - g 73 -16.2 -3.01074 | overlap 584464 CAAGCAGAAGAAGGA CCG-CGCGAGCGTGGACGGC GAG ACCGTC-ACGCGCGCGACGG AGGAGAAGCACTAGC CMS_0552 583388 - 584521 + | putative integral membrane protein CMS_0553 584604 - 585413 + | putative two component response regulator CMS_0554 585515 - 587098 + | putative two component sensor kinase CMS_0555 587100 - 587366 + | hypothetical protein CMS_0556 587418 - 587960 + | putative acetyltransferase CMS_0557 588063 - 588728 + | hypothetical protein CMS_0558 588846 - 589004 + | hypothetical protein CMS_0559 589117 - 589431 + | ArsR family transcriptional regulator CMS_0560 590882 - 589491 - | putative DNA repair protein RadA TERM 198 590947 - 590986 + r 72 -14.2 -3.41002 | overlap 590948 590951 590956 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 199 590948 - 590985 + r 73 -17.7 -2.63878 | overlap 590947 590951 590956 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 200 590951 - 590982 + r 73 -18 -2.6072 | overlap 590948 590947 590956 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 201 590956 - 590977 + r 71 -15.1 -3.10677 | overlap 590951 590948 590947 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0561 591896 - 590934 - | putative insertion element IS1121 transposase CMS_0562 592001 - 592321 + | putative DNA-binding protein CMS_0563 592387 - 592893 + | hypothetical protein TERM 202 592956 - 592915 - f 100 -36.7 -2.79915 | AGGGACCGGACGAGA CGCGGCCCGGGCGCCTCCC CATC GGGAGGCACCCGGGCCGCG ACCGCGCGCCCGTGC TERM 203 594030 - 593991 - f 72 -14.2 -3.41002 | overlap 593992 593995 594000 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 204 594029 - 593992 - f 73 -17.7 -2.63878 | overlap 593991 593995 594000 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 205 594026 - 593995 - f 73 -18 -2.6072 | overlap 593992 593991 594000 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 206 594021 - 594000 - f 71 -15.1 -3.10677 | overlap 593995 593992 593991 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_0565 594102 - 594881 + | putative ABC transporter ATP-binding protein TERM 207 594931 - 594902 - T 83 -17.9 -3.35679 | opp_overlap 594902 CGCCCGCACGGAGAA GGCCCCGCATGCT CTGG AGGATGCGGGGCC TTCTGCGTGCCGTGG TERM 208 594902 - 594931 + T 83 -17.9 -3.36327 | opp_overlap 594902 CGCCCGCACGGAGAA GGCCCCGCATGCT CTGG AGGATGCGGGGCC TTCTGCGTGCCGTGG CMS_0566 595800 - 594961 - | hypothetical protein CMS_0567 596423 - 595821 - | putative RNA polymerase sigma factor CMS_0568 597620 - 596988 - | hypothetical protein CMS_0569 598843 - 597764 - | hypothetical protein CMS_0570 599108 - 599887 + | hypothetical protein CMS_0571 601416 - 599929 - | hypothetical protein TERM 209 601241 - 601209 - G 74 -16.2 -3.13403 | overlap 601207 CGGCCGCGAGGAAGA CGGAGCGGCGGCCG ACGAG CGGCGGCCGCTCGG CGGGGACCGGGGCGT TERM 210 601658 - 601630 - R 87 -21.8 -2.80935 | AGCGGACGCACGAGA GGGGCACGCGAG ACCAG CTCGCGTGCCCC TCCCCGGGTGACCCT CMS_0572 602519 - 601680 - | hypothetical protein CMS_0573 602692 - 602949 + | hypothetical protein TERM 211 603021 - 602968 - T 100 -31.2 -3.78934 | TCCGCTGTAGAAGAA GACACCGCCGCCCTCTCCGACCGT ACGGGG AAGGTCGGAGAGCGCGGCGGTGTC GACGAGTCAGCGCTC CMS_0574 603198 - 603028 - | hypothetical protein CMS_0575 603992 - 603195 - | hypothetical protein TERM 212 603645 - 603656 + g 71 -7.2 -4.20516 | TCCAGCCTCGGTCTT GCGG ACAT CCGC TTTGTTCACTGCGAG CMS_0576 604171 - 604422 + | hypothetical protein TERM 213 604489 - 604449 - T 86 -21.2 -2.94912 | overlap 604455 604473 TGGGCAACGCAGATA CGACAACGCCCGCCCGGT TCAAC ACGGGGCGGGCGTCGTCA GTCGATCAACGGATC TERM 214 604483 - 604455 - T 85 -17.4 -3.50045 | overlap 604449 604473 ACGCAGATACGACAA CGCCCGCCCGGT TCAAC ACGGGGCGGGCG TCGTCAGTCGATCAA CMS_0577 605558 - 604503 - | putative calcium-binding exported protein TERM 215 605651 - 605690 + r 72 -14.2 -3.41002 | overlap 605652 605655 605660 AGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 216 605652 - 605689 + r 73 -17.7 -2.63878 | overlap 605651 605655 605660 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 217 605655 - 605686 + r 73 -18 -2.6072 | overlap 605652 605651 605660 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 218 605660 - 605681 + r 71 -15.1 -3.10677 | overlap 605655 605652 605651 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0578 606600 - 605638 - | putative insertion element IS1121 transposase CMS_0579 607618 - 606698 - | putative epimerase CMS_0580 608459 - 607629 - | DeoR family transcriptional regulator TERM 219 608929 - 608882 - g 74 -11.9 -3.78934 | gap 1, overlap 608883 GGTCTTCGAGAACAA GTCGCCGTCGTTCGGCCCGTCG CTCGC CGACAGCCCGGACGTCGACG-C TGCGGTGGACGACGA CMS_0581 608553 - 609695 + | galactose-1-phosphate uridylyltransferase CMS_0582 609692 - 610852 + | galactokinase CMS_0583 610873 - 611814 + | hypothetical protein CMS_0584 611811 - 612410 + | putative siderophore binding protein CMS_0585 613376 - 612474 - | putative methylenetetrahydrofolate dehydrogenase/cyclohydrolase CMS_0586 614707 - 613373 - | serine hydroxymethyltransferase CMS_0587 615097 - 616584 + | putative amylosucrase CMS_0588 616625 - 617128 + | hypothetical protein CMS_0589 618011 - 617154 - | LysR family transcriptional regulator CMS_0591 620574 - 619543 - | putative oxidoreductase CMS_0590 618168 - 619634 + | putative integral membrane transport protein sirR 620703 - 621386 + | putative metal-dependent transcriptional regulator CMS_0593 622674 - 621424 - | putative manganese transport protein TERM 220 622756 - 622735 - R 78 -17.3 -3.05343 | CGCACACGCGGAAGA GCCCGTCCG GATG CGGACGGGC CCTCGGGCGGAGCGG CMS_0594 623816 - 622887 - | hypothetical protein CMS_0595 625273 - 623960 - | putative integral membrane transport protein CMS_0596 625426 - 626223 + | putative formyltetrahydrofolate deformylase CMS_0597 629943 - 626326 - | putative secreted peptidase TERM 221 628675 - 628705 + g 70 -14.7 -3.30124 | gap 1 GCCCGCGACCGTGCT CGCGGCGACCGTGG TGAT CCACGG-CGACGCG TTGTCGAGCGTGGAG CMS_0598 633853 - 630254 - | putative secreted peptidase CMS_0599 635313 - 634099 - | isocitrate dehydrogenase CMS_0600 635537 - 635989 + | putative acetyltransferase TERM 222 636013 - 636052 + T 72 -14.2 -3.41002 | overlap 636014 636017 636022 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 223 636014 - 636051 + T 73 -17.7 -2.63878 | overlap 636013 636017 636022 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 224 636017 - 636048 + T 73 -18 -2.6072 | overlap 636014 636013 636022 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 225 636022 - 636043 + T 71 -15.1 -3.10677 | overlap 636017 636014 636013 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0601 636962 - 636000 - | putative insertion element IS1121 transposase CMS_0602 637131 - 637580 + | putative phosphotransferase enzyme IIA component CMS_0604 638841 - 637798 - | putative integral membrane protein CMS_0603 637577 - 637849 + | putative phosphotransferase IIB component CMS_0605 639494 - 638838 - | MerR family transcriptional regulator CMS_0606 641268 - 639565 - | putative phosphomannomutase punA 642092 - 641265 - | purine nucleoside phosphorylase TERM 226 642165 - 642107 - H 79 -14.3 -3.59979 | gap 1, opp_overlap 642148, overlap 642108 TGCCCCGATCCTAAA TGCGCGCGCC-CGCGCGACCCGGGCCAC GACG GCGGGCGGGTTCGCGCGGGGCGGGGGCC TGCGGGATGATGTGC TERM 227 642164 - 642108 - H 74 -17.8 -2.75844 | gap 1, opp_overlap 642148, overlap 642107 GCCCCGATCCTAAAT GCGCGCGCC-CGCGCGACCCGGGCCAC GACG GCGGGCGGGTTCGCGCGGGGCGGGGGC CTGCGGGATGATGTG CMS_0608 642177 - 643625 + | putative dihydrolipoamide oxidoreductase accC 645475 - 643706 - | biotin carboxylase TERM 228 645578 - 645529 - H 71 -9.2 -3.86015 | overlap 645532 GAGGGTGCGCACAAA CATGCGGGG-CCGACGGGTACGCG TGCC CACA-ACCGGCCGGTCCCCGCGCG CCCCTGGCATGATCG CMS_0610 645598 - 646125 + | hypothetical protein CMS_0611 646807 - 646136 - | hypothetical protein TERM 229 647102 - 647047 - g 79 -14.1 -3.66018 | gap 3, opp_overlap 647036 CGAGGACTCCAAGAA GTCGTTCTGGCGCGCCGACACGGTCGAG GTG CTCGA-CGCGTCGCCGCACC-GC-CGAC CGCACGTGTGGGCCG CMS_0612 646814 - 648139 + | putative RNA methyltransferase CMS_0613 648184 - 648942 + | putative two-component response regulator TERM 230 648966 - 649005 + T 72 -14.2 -3.41002 | overlap 648967 648970 648975 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 231 648967 - 649004 + T 73 -17.7 -2.63878 | overlap 648966 648970 648975 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 232 648970 - 649001 + T 73 -18 -2.6072 | overlap 648967 648966 648975 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 233 648975 - 648996 + T 71 -15.1 -3.10677 | overlap 648970 648967 648966 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0614 649915 - 648953 - | putative insertion element IS1121 transposase CMS_0616 651349 - 652371 + | putative integral membrane protein CMS_0617 652897 - 652664 - | hypothetical protein CMS_0618 654507 - 652894 - | propionyl-CoA carboxylase complex B subunit TERM 234 654794 - 654760 - g 70 -17 -2.78816 | opp_overlap 654768 TCACGCTCGACCAGA CGGCGGGACGCGGCCG TCG CGGCCGCGTCTGGACG GCGCCGCCCGGGCGA birA 654582 - 655397 + | putative BirA bifunctional protein [includes: biotin operon repressor; biotin--[acetyl-coa-carboxylase] synthetase (biotin--protein ligase) CMS_0620 655401 - 656195 + | putative integral membrane protein CMS_0621 656736 - 656245 - | putative integral membrane protein CMS_0622 656806 - 658023 + | phosphoribosylaminoimidazole carboxylase ATPase subunit PurK CMS_0623 658114 - 658674 + | phosphoribosylaminoimidazole carboxylase catalytic subunit PurE CMS_0624 658749 - 660020 + | LytR family transcriptional regulator CMS_0625 661176 - 660037 - | putative glycosyl transferase CMS_0626 661972 - 661268 - | putative polysaccharide ABC transport ATP-binding protein CMS_0627 662867 - 661998 - | putative polysaccharide ABC transport integral membrane protein CMS_0628 663817 - 662963 - | putative dTDP-sugar reductase CMS_0629 664803 - 663814 - | putative sugar dehydratase CMS_0630 664981 - 665433 + | putative integral membrane protein TERM 235 665419 - 665441 + F 71 -14.8 -3.16564 | CCGCCCGGCGAAGGC CGGGCCGGTC GCT GACGGGCCCG TTGCTAGACTCCGAC CMS_0631 665459 - 666064 + | putative dTDP-sugar epimerase CMS_0632 666068 - 666931 + | putative nucleotidyl transferase CMS_0633 667828 - 666977 - | putative glycosyl transferase CMS_0634 668103 - 670340 + | integral membrane protein TTHA0885 670337 - 671299 + | putative glycosyl transferase CMS_0636 672340 - 671342 - | putative glycosyl transferase CMS_0637 674162 - 672432 - | putative integral membrane protein TERM 236 673452 - 673425 - G 81 -17.8 -3.21416 | gap 1 GAGGCCGACCACGAA CGCCGGGAGCGGT CCG ACCGCTCC-GGCG ACCACGACGGCCAGC CMS_0638 674456 - 675304 + | putative glycosyl transferase glf 675372 - 676535 + | UDP-galactopyranose mutase CMS_0640 676535 - 678553 + | putative glycosyl transferase CMS_0641 678632 - 680527 + | hypothetical protein CMS_0642 680665 - 681135 + | hypothetical protein CMS_0642A 682464 - 681172 - | putative exopolysaccharide production protein CMS_0642B 683967 - 682513 - | putative exopolysaccharide production protein CMS_0642C 685239 - 684061 - | putative acyl-CoA dehydrogenase manA 685405 - 686712 + | mannose-6-phosphate isomerase CMS_0644 686747 - 687715 + | UDP-glucose 4-epimerase TERM 237 687739 - 687778 + T 72 -14.2 -3.41002 | overlap 687740 687743 687748 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 238 687740 - 687777 + T 73 -17.7 -2.63878 | overlap 687739 687743 687748 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 239 687743 - 687774 + T 73 -18 -2.6072 | overlap 687740 687739 687748 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 240 687748 - 687769 + T 71 -15.1 -3.10677 | overlap 687743 687740 687739 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0645 688688 - 687726 - | putative insertion element IS1121 transposase CMS_0646 688939 - 689256 + | WhiB family transcriptional regulator TERM 241 689652 - 689634 - g 70 -13.8 -3.28712 | GCTCTCGGCCGACAA CGCGCCGG CGC CCGACGCG CTCGAGCGACTGCTC CMS_0647 689350 - 692439 + | putative integral membrane glycosyl transferase CMS_0648 692426 - 693943 + | putative secreted protein CMS_0649 694499 - 694056 - | hypothetical protein CMS_0650 694545 - 694766 + | hypothetical protein manB 694799 - 696190 + | phosphomannomutase CMS_0652 696324 - 696614 + | hypothetical protein CMS_0653 696659 - 696874 + | putative heavy metal binding protein TERM 242 697112 - 697064 - g 70 -16.6 -2.70932 | gap 1 GGCCGCGGTCAACTA CGCCACGCACCGCGCGCGCGTGC AGCT GCCCGCGGGCACGA-GCGTCGCG GACGCGATCCGCACC CMS_0654 696876 - 699344 + | putative metal transporter ATPase CMS_0655 699407 - 700891 + | adenosylhomocysteinase CMS_0656 701854 - 700985 - | putative integral membrane protein CMS_0659 705478 - 702920 - | putative beta-glucosidase CMS_0660 706809 - 705475 - | putative sugar transporter CMS_0661 706866 - 707501 + | TetR family transcriptional regulator CMS_0662 708869 - 707562 - | putative secreted protein TERM 243 708897 - 708936 + r 72 -14.2 -3.41002 | overlap 708898 708901 708906 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 244 708898 - 708935 + r 73 -17.7 -2.63878 | overlap 708897 708901 708906 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 245 708901 - 708932 + r 73 -18 -2.6072 | overlap 708898 708897 708906 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 246 708906 - 708927 + r 71 -15.1 -3.10677 | overlap 708901 708898 708897 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_0664 710912 - 709959 - | putative regulatory protein CMS_0665 712165 - 710909 - | putative secreted protein TERM 247 711936 - 711986 + g 90 -21.1 -3.28712 | gap 1 AGCGTGACCTCGACG CCCTGCCCCTGG-AGCACGCGGGC GAGC GCCTGCGTGCCACCGGGCGCGGGG TTGTCGGGGGCGAGC CMS_0666 712848 - 712162 - | putative integral membrane protein CMS_0667 714128 - 712845 - | putative integral membrane protein CMS_0668 714242 - 714922 + | putative two-component system response regulator CMS_0669 714942 - 716561 + | putative two-component sensor kinase CMS_0670 716680 - 718278 + | hypothetical protein CMS_0671 718340 - 719164 + | hypothetical protein CMS_0672 719301 - 720008 + | hypothetical protein secA 720208 - 723030 + | preprotein translocase SecA subunit TERM 248 723068 - 723030 - T 74 -17.5 -2.71364 | gap 2 CGACCGGCGCAAGTA GGACCCCCGGGGCGACGGG TCT CCCGTCGTCCC-GG-GTCC GACCGCATACGCCGA TERM 249 723130 - 723089 - T 100 -33.3 -2.63301 | opp_overlap 723092 723096, overlap 723096 CATACGCCGACAGCA CGACGAAGGGCGCATCTCC CGCG GGAGATGCGCCCTTCGTCG TGTCGGGGGCGGGCT TERM 250 723092 - 723127 + T 100 -27.8 -2.62184 | opp_overlap 723089 723096, overlap 723096 ACGCCGACAGCACGA CGAAGGGCGCATCTCC CGCG GGAGATGCGCCCTTCG TCGTGTCGGGGGCGG TERM 251 723123 - 723096 - T 90 -21.4 -3.24188 | opp_overlap 723092 723096, overlap 723089 CGACAGCACGACGAA GGGCGCATCTCC CGCG GGAGATGCGCCC TTCGTCGTGTCGGGG TERM 252 723096 - 723123 + T 90 -21.4 -3.24747 | opp_overlap 723096 723089, overlap 723092 CGACAGCACGACGAA GGGCGCATCTCC CGCG GGAGATGCGCCC TTCGTCGTGTCGGGG CMS_0674 723731 - 723144 - | hypothetical protein CMS_0675 723938 - 724543 + | hypothetical protein CMS_0676 724613 - 725251 + | putative secreted protein CMS_0677 725287 - 726843 + | hypothetical protein CMS_0678 726853 - 728355 + | histidine kinase TERM 253 728400 - 728425 + T 76 -17.5 -2.81464 | opp_overlap 728400 CGGGGGACGACGAGA GCCGGGCAGCC CGTG GGCGGCCCGGC TCTCGTCGGTGGTGC TERM 254 728425 - 728400 - T 76 -17.5 -2.82516 | opp_overlap 728400 CGGGGGACGACGAGA GCCGGGCAGCC CGTG GGCGGCCCGGC TCTCGTCGGTGGTGC CMS_0679 728701 - 728453 - | WhiB family transcriptional regulator CMS_0681 729013 - 729378 + | putative integral membrane protein TERM 255 729393 - 729420 + T 76 -4.8 -4.56597 | gap 1, overlap 729362 AGCCGGACGACGCGT GCGCGGGCGTC AGGCGTC GACGCC-GAGC TTTTTGCGCAGCGAC CMS_0682 729881 - 729402 - | putative peroxidase CMS_0684 730390 - 730884 + | hypothetical protein CMS_0685 731009 - 731239 + | hypothetical protein CMS_0686 731455 - 732222 + | hypothetical protein CMS_0687 732376 - 732711 + | hypothetical protein CMS_0688 734203 - 732722 - | putative L-asparagine permease CMS_0689 734351 - 734917 + | putative lipoprotein CMS_0690 736273 - 734945 - | putative integral membrane transport protein CMS_0691 736692 - 736270 - | putative MarR-family protein CMS_0692 736879 - 737100 + | hypothetical protein TERM 256 737105 - 737153 + F 73 -15.4 -3.18383 | gap 1, opp_overlap 737105 GGGGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_0693 737157 - 738119 + | putative insertion element ISCmi2 transposase CMS_0694 739867 - 738932 - | putative macrolide-resistance protein TERM 257 739942 - 739916 - R 77 -13 -3.76224 | opp_overlap 739914 GCTGGACGCACGAAA GCCGGTCCAG ACTGTCG CCGGACCGGC TCTCGGTTCCCGTCT qcrB 741613 - 739985 - | ubiquinol-cytochrome c reductase cytochrome b subunit qcrA 742706 - 741597 - | ubiquinol-cytochrome C reductase iron-sulfur subunit (Rieske iron-sulfur protein) qcrC 743552 - 742752 - | ubiquinol-cytochrome c reductase cytochrome c subunit ctaE 744217 - 743579 - | cytochrome c oxidase polypeptide III trpD 744297 - 745352 + | anthranilate phosphoribosyltransferase 1 CMS_0700 745400 - 746146 + | hypothetical protein TERM 258 746216 - 746182 - T 100 -30.8 -2.62184 | GGCCCCGGGAGACGA CGCGCGCCCCGCCAGC GGG GCTGACGGGGCGCGCG GATGGTGCCGGTGCG CMS_0702 748588 - 747782 - | putative glycerol uptake facilitator protein CMS_0703 748816 - 749817 + | putative dihydroxyacetone kinase subunit dak2 749821 - 750474 + | putative dihydroxyacetone kinase subunit CMS_0705 750471 - 751205 + | putative PTS system enzyme CMS_0706 751647 - 751231 - | hypothetical protein CMS_0707 751740 - 752255 + | hypothetical protein CMS_0708 752792 - 752301 - | putative glutathione peroxidase CMS_0709 754620 - 752860 - | putative glycerol phosphate dehydrogenase CMS_0710 754712 - 755689 + | DeoR family transcriptional regulator TERM 259 756389 - 756420 + F 100 -20.2 -4.07885 | opp_overlap 756395, overlap 756390 756392 CAGTATCGCTCACCA CCAGAAGGCCCCGG GAGA CCGGGGCCTTCTGC TTTTCCCGGACGCTC TERM 260 756390 - 756419 + F 91 -23.7 -3.04517 | opp_overlap 756395, overlap 756389 756392 AGTATCGCTCACCAC CAGAAGGCCCCGG GAGA CCGGGGCCTTCTG CTTTTCCCGGACGCT TERM 261 756392 - 756417 + F 87 -20.5 -3.08032 | opp_overlap 756395, overlap 756390 756389 TATCGCTCACCACCA GAAGGCCCCGG GAGA CCGGGGCCTTC TGCTTTTCCCGGACG TERM 262 756414 - 756395 - f 79 -16.4 -3.44051 | opp_overlap 756392 756390 756389 CGCTCACCACCAGAA GGCCCCGG GAGA CCGGGGCC TTCTGCTTTTCCCGG CMS_0711 756547 - 758601 + | threonine-tRNA synthetase CMS_0712 758604 - 759188 + | hypothetical protein CMS_0713 759202 - 760104 + | putative pyridoxine biosynthesis protein TERM 263 760163 - 760192 + G 71 -15.7 -3.05384 | GCCCTGCAGGGGGAC GTCCGCGAGCACG TCCG CGTGCTCGAGGGC TTCGGTGCCCGGACG CMS_0714 760094 - 760723 + | putative amino acid amidotransferase TERM 264 761148 - 761123 - g 76 -10.4 -4.03888 | gap 1 CACCGACAACAAGAA CCGCGCGG-CC GCCGA GGTCCGCACGG CCATGAGCCGCAACG CMS_0715 760800 - 761567 + | hypothetical protein ruvC 761619 - 762233 + | crossover junction endodeoxyribonuclease RuvC ruvA 762251 - 762895 + | holliday junction DNA helicase RuvA ruvB 762892 - 763971 + | holliday junction DNA helicase RuvB CMS_0719 764009 - 764431 + | putative preprotein translocase subunit secD 764558 - 766369 + | protein-export membrane protein SecD secF 766369 - 767379 + | protein-export membrane protein SecF CMS_0722 767376 - 767735 + | hypothetical protein relA 767866 - 770115 + | GTP pyrophosphokinase CMS_0724 770669 - 770094 - | hypothetical protein CMS_0725 771995 - 770763 - | hypothetical protein CMS_0726 772596 - 774056 + | putative ATPase TERM 265 774321 - 774304 - f 71 -3.3 -4.4078 | TCCCTGGAAGGAAAA CGTGTCC ACCA AGTCACG CACCCGCAGTAAGAC CMS_0727 774305 - 774934 + | 30S ribosomal protein S4 CMS_0728 775108 - 775329 + | hypothetical protein CMS_0729 775335 - 777992 + | alanine tRNA synthetase CMS_0730 777992 - 778477 + | hypothetical protein CMS_0731 778995 - 780005 + | hypothetical protein CMS_0732 779998 - 780888 + | shikimate 5-dehydrogenase CMS_0733 780892 - 782214 + | chorismate synthase CMS_0734 782217 - 782708 + | shikimate kinase I CMS_0735 782705 - 783835 + | 3-dehydroquinate synthase CMS_0736 783832 - 784620 + | putative short chain oxidoreductase TERM 266 785677 - 785638 - g 72 -14.2 -3.41002 | overlap 785639 785642 785647 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TGAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 267 785676 - 785639 - g 73 -17.7 -2.63878 | overlap 785638 785642 785647 CAACACTGAACGAAT CCACTCAAGCCACGGGC TGAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 268 785673 - 785642 - g 73 -18 -2.6072 | overlap 785639 785638 785647 CACTGAACGAATCCA CTCAAGCCACGGGC TGAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 269 785668 - 785647 - g 71 -15.1 -3.10677 | overlap 785642 785639 785638 AACGAATCCACTCAA GCCACGGGC TGAC GCCCGCGGC CCGAGTGTCACCAAC CMS_0737 784728 - 785690 + | putative insertion element IS1121 transposase CMS_0738 786315 - 785701 - | hypothetical protein CMS_0739 786579 - 787553 + | putative ATPase CMS_0740 787558 - 788886 + | hypothetical protein CMS_0741 789082 - 791427 + | hypothetical protein TERM 270 792122 - 792071 - g 70 -13.6 -3.29144 | gap 1, opp_overlap 792074, overlap 792074 GCACCGCCCCGAGAA GGACGTCGACTGGAAGCGC-GGCCG CGA CGCCCTGCGCTTCCAGGAGGCGTTC GTGCTCCAGACCGCG TERM 271 792074 - 792119 + G 77 -16.1 -3.21099 | gap 1, opp_overlap 792071 792074 CCGCCCCGAGAAGGA CGTCGACTGGAAGCGC-GGCCG CGA CGCCCTGCGCTTCCAGGAGGCG TTCGTGCTCCAGACC recG 791424 - 793607 + | putative ATP-dependent DNA helicase RecG coaD 793633 - 794124 + | phosphopantetheine adenylyltransferase CMS_0744 794144 - 794716 + | hypothetical protein rpmF 794720 - 794923 + | 50s ribosomal protein L32 CMS_0746 794949 - 795665 + | ribonuclease III TERM 272 795765 - 795800 + G 74 -16.1 -3.15861 | GAGATCCTCGACGCG CGCTCCCTCAAGCGG CACGAC CCGCTCGAGGGCGCG TTCGTCGACCTGCTC CMS_0747 795672 - 796607 + | formamidopyrimidine-DNA glycosylase CMS_0748 797738 - 796620 - | hypothetical protein CMS_0749 797891 - 801616 + | putative chromosome structure maintenance protein TERM 273 802036 - 801990 - g 74 -17.3 -2.70932 | GTTCCTGCGCAACTA CGGCCGCACGG-CCGTCGTCGGC GCG GCGGAC-ACGTTCCGCGCGGCCG CCGTCGACCAGCTCG ftsY 801637 - 802512 + | signal recognition particle receptor ffh 802561 - 804132 + | signal recognition particle protein CMS_0752 804268 - 804648 + | putative dioxygenase CMS_0753 805909 - 804737 - | putative serine protease CMS_0754 807149 - 805950 - | putative glutamate--cysteine ligase rpsP 807357 - 807764 + | 30S ribosomal protein S16 TERM 274 807904 - 807846 - g 73 -18.1 -2.57795 | gap 1, overlap 807842 807843 GTGACGAGCAAGGGA TCCCCCCGCGGCGAGGTCCTCGAGGTGC GCGT GCACCCCGAGGACCTCGGC-CGGGTCAT CGGCCGAGCGGGTCG CMS_0756 807768 - 808004 + | hypothetical protein rimM 807982 - 808617 + | putative 16S rRNA processing protein trmD 808619 - 809305 + | tRNA (guanine-N1)-methyltransferase map 810107 - 809340 - | methionine aminopeptidase CMS_0760 810179 - 810670 + | putative integral membrane protein rplS 810841 - 811185 + | 50S ribosomal protein L19 sipU 811252 - 812004 + | signal peptidase I rnhB 812004 - 812663 + | ribonuclease HII CMS_0764 812770 - 813093 + | hypothetical protein CMS_0765 813199 - 813561 + | hypothetical protein CMS_0766 813561 - 815117 + | putative DNA uptake protein smf 815114 - 816550 + | putative DNA-binding/uptake protein xerC 816767 - 817714 + | tyrosine recombinase XerC CMS_0769 818357 - 817794 - | M23B family metallopeptidase CMS_0770 818457 - 819926 + | putative sugar transporter rpsB 820165 - 821127 + | 30S ribosomal protein S2 TERM 275 821190 - 821138 - f 79 -18.4 -2.79302 | gap 2 AGTAGTCCGACCACA CGCACCATCCCGTCGGGCGGGCGCGG GTT CCGCGCCCGCCCGTCGGG-CACT-CA CCTCCGGGAGACCCC tsf 821238 - 822065 + | elongation factor Ts TERM 276 822079 - 822110 + F 100 -27.4 -3.39327 | AGCACCACCACCACG GGGAGCCCGGGTCG CATG CGACCCGGGCTCCC TTCTCCATGTCCGGG pyrH 822225 - 822941 + | uridylate kinase frr 823055 - 823612 + | ribosome recycling factor cdsA 823736 - 824653 + | putative phosphatidate cytidylyltransferase CMS_0776 824655 - 825209 + | hypothetical protein CMS_0777 825402 - 826028 + | hypothetical protein CMS_0778 826097 - 827827 + | putative Na+/H+ antiporter CMS_0779 827863 - 828159 + | hypothetical protein CMS_0780 828156 - 828890 + | hypothetical protein CMS_0781 829964 - 828906 - | putative integral membrane protein CMS_0782 831766 - 829991 - | putative low complexity hydrophilic protein CMS_0783 832052 - 833896 + | hypothetical protein CMS_0784 834076 - 834888 + | putative thioredoxin CMS_0785 837540 - 834964 - | 1,4-alpha-glucan branching enzyme CMS_0786 840179 - 837537 - | putative alpha-amylase TERM 277 841241 - 841194 - g 81 -17.6 -3.2244 | overlap 841187 841189 841198 CACTACAACACTGAA CGGATCCACTCGAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTCACCA ACGTCATGACCCAGT TERM 278 841237 - 841198 - g 73 -17.8 -2.57335 | overlap 841194 841187 841189 ACAACACTGAACGGA TCCACTCGAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC CMS_0787 840288 - 841250 + | putative insertion element IS1121 transposase CMS_0789 842047 - 841388 - | putative hydrolase CMS_0790 842161 - 843345 + | putative glycosyl transferase CMS_0791 843440 - 843676 + | hypothetical protein CMS_0792 843669 - 843863 + | hypothetical protein TERM 279 843948 - 843978 + F 89 -16.3 -3.84674 | gap 1 CTTCGGCTTTCGGAC GC-GAGGCTCCTTC CGCG GAAGGAGCCTCAGC TTCTTCTCCTCCACT CMS_0793 844096 - 845256 + | putative oxidase CMS_0794 845973 - 845269 - | hypothetical protein CMS_0795 847124 - 846081 - | putative esterase CMS_0796 847910 - 847191 - | TetR family transcriptional regulator CMS_0797 849964 - 847907 - | putative hydrolase CMS_0798 851694 - 849961 - | putative nucleotide-binding ABC transporter subunit CMS_0798A 852572 - 851691 - | putative ABC transporter permease CMS_0799 853594 - 852569 - | putative oligopeptide ABC transporter integral membrane protein CMS_0802 855840 - 855373 - | putative oxygenase CMS_0803 855944 - 856930 + | DeoR family transcriptional regulator TERM 280 859738 - 859720 - T 70 -14.6 -3.21747 | opp_overlap 859736 CGACGTGATGAGGAA CGCGCTCA TGA TGAGCGCG GCCACCGTGAGCAGC CMS_0810 861414 - 860932 - | putative plasmid-related protein TERM 281 861803 - 861790 - gR 73 -2.3 -4.56597 | TGGTCTCGCTAAAAA GGCGT CGAC AGGCC AGACAAAACCGAACC CMS_0812 863124 - 861988 - | putative phage-related protein CMS_0811 861453 - 862064 + | putative phage-related protein TERM 282 862546 - 862532 - GT 87 -7 -4.77165 | opp_overlap 862541 862542 TGTGGCAGAACAAAA CGTGCG AGA CGCGCG GCGAGCTTCATTGGG CMS_0813 863698 - 863450 - | hypothetical protein CMS_0814 864027 - 864857 + | putative short-chain dehydrogenase CMS_0815 865335 - 864892 - | hypothetical protein TERM 283 865357 - 865395 + r 75 -13.1 -3.61715 | gap 1, overlap 865332 GTCTACGCCGGCGGG GGCGGGGTGTCGTCCGCT GCGG GGCCGACG-CGCTCCGCC TTCTTCGGGCGCATG CMS_0816 865601 - 865344 - | putative phage-related protein CMS_0817 865896 - 865669 - | hypothetical protein CMS_0818 866572 - 865946 - | putative DNA-methyltransferase CMS_0819 867099 - 866569 - | putative sigma factor CMS_0820 867415 - 868176 + | putative two component system response regulator CMS_0821 868446 - 869714 + | putative sortase-sorted surface protein CMS_0822 869890 - 871104 + | putative oxidoreductase CMS_0823 871155 - 871877 + | putative integral membrane protein CMS_0824 872050 - 872742 + | putative sortase-sorted surface protein CMS_0825 872739 - 874190 + | putative integral membrane protein CMS_0826 875241 - 874228 - | LacI family transcriptional regulator CMS_0827 876026 - 875304 - | putative integral membrane protein CMS_0828 877249 - 876077 - | putative glycosyl transferase CMS_0829 878027 - 877416 - | putative secreted protein CMS_0829A 878228 - 878037 - | hypothetical protein CMS_0830 878364 - 878903 + | putative integral membrane protein CMS_0831 878900 - 879280 + | putative integral membrane protein CMS_0832 879277 - 879756 + | hypothetical protein CMS_0833 879766 - 880359 + | putative nudix hydrolase CMS_0834 881380 - 880373 - | D-alanine--D-alanine ligase TERM 284 880951 - 880988 + g 70 -13.3 -3.35679 | GCCAGTCGGGCGTGC GGACGCCGCCGGCGCGC AGCA GCGTCTTGGCGACGTCC TTGTCCATCGCGAGG CMS_0835 881561 - 882085 + | hypothetical protein CMS_0836 882764 - 882180 - | hypothetical protein CMS_0837 883039 - 884208 + | putative sugar binding protein CMS_0838 884283 - 885197 + | putative integral membrane transport protein CMS_0839 885190 - 886071 + | putative integral membrane transport protein CMS_0840 886151 - 886921 + | hypothetical protein CMS_0841 886918 - 888138 + | putative oxidoreductase CMS_0842 888159 - 889514 + | ROK family transcriptional regulator CMS_0843 889511 - 890167 + | putative hydrolase CMS_0844 891107 - 890205 - | putative integral membrane protein aroQ 891381 - 891971 + | monofunctional chorismate mutase precursor CMS_0846 892475 - 892137 - | putative integral membrane protein CMS_0847 893025 - 892534 - | hypothetical protein CMS_0848 893709 - 893260 - | hypothetical protein CMS_0849 893814 - 894422 + | hypothetical protein CMS_0850 894856 - 894389 - | hypothetical protein CMS_0851 895880 - 894942 - | putative integral membrane protein CMS_0852 896046 - 896564 + | TetR family transcriptional regulator CMS_0853 896620 - 897069 + | hypothetical protein CMS_0854 897172 - 897525 + | hypothetical protein CMS_0855 898354 - 897662 - | putative secreted protein CMS_0856 899425 - 898451 - | DeoR family transcriptional regulator CMS_0857 899566 - 900549 + | putative oxidoreductase CMS_0858 900678 - 901184 + | putative RNA polymerase sigma factor CMS_0859 901181 - 901978 + | hypothetical protein CMS_0860 902020 - 902595 + | putative DNA-binding protein CMS_0861 902622 - 903161 + | hypothetical protein CMS_0862 903283 - 904623 + | putative multidrug efflux protein CMS_0863 905720 - 904830 - | hypothetical protein CMS_0864 905852 - 906169 + | hypothetical protein CMS_0866 907483 - 906989 - | hypothetical protein CMS_0867 908526 - 907507 - | LacI family transcriptional regulator CMS_0868 908741 - 910033 + | putative solute-binding transport protein TERM 285 910099 - 910136 + F 100 -29.3 -3.14132 | gap 1 GGCTGATCCTGCACA CC-CCGAGGGCGGCGTCG CGA CGACGCCGCCCTCGGCGG TTCGTGCGCGACGCC CMS_0869 910217 - 911035 + | putative integral membrane transport protein CMS_0870 911032 - 911937 + | putative intgral membrane transport protein CMS_0871 911934 - 914294 + | putative beta-xylosidase TERM 286 914599 - 914628 + T 89 -4.3 -5.12474 | gap 1 GAGCGACGAGGACAA GCGAAGCCCGAGTG GCC TACTTGCGCTT-GC TTTTTATATATTGTC CMS_0872 915145 - 914741 - | hypothetical protein TERM 287 914832 - 914812 - G 77 -9 -4.09739 | gap 1, opp_overlap 914806 914804, overlap 914801 GCAAGTCGCCGAAAA TCGGC-GCC AAGG GGCCGCCGA TGCTCGTCTTCTCGA CMS_0873 916242 - 915385 - | putative DNA-binding protein CMS_0874 916344 - 917024 + | putative short chain oxidoreductase CMS_0875 917085 - 917483 + | hypothetical protein CMS_0876 917517 - 918083 + | hypothetical protein CMS_0877 918348 - 918049 - | putative integral membrane protein CMS_0878 918462 - 919355 + | putative hydrolase CMS_0879 919429 - 920670 + | hypothetical protein abfA 921400 - 922941 + | alpha-N-arabinofuranosidase CMS_0882 923383 - 923009 - | putative Lsr2-like protein CMS_0883 923483 - 924556 + | hypothetical protein CMS_0884 925134 - 926135 + | putative oxidoreductase TERM 288 926180 - 926160 - f 71 -9.8 -3.91084 | GGATCCCGAAGTAAA CTTGAGTC CGCAC GACTCAAG TAATACCGAAGGGGA CMS_0885 926201 - 928393 + | putative ATP-dependent protease ATP-binding subunit CMS_0886 929080 - 928436 - | putative ABC transporter ATP-binding protein CMS_0887 929791 - 929099 - | putative integral membrane transport protein TERM 289 931389 - 931432 + r 89 -20.2 -3.25823 | TCCTTCACGCGTACT CGGATGGAGGGCGCGGGCCC CGTG GGGCCCGCGCCTCCGATCAG TTGCTGTGCCAGGAC rafA 934270 - 932087 - | alpha-galactosidase CMS_0892 934796 - 934356 - | hypothetical protein CMS_0893 934832 - 935836 + | putative oxidoreductase CMS_0894 935844 - 937052 + | putative dipeptidase CMS_0895 937097 - 937903 + | hypothetical protein CMS_0896 939759 - 937948 - | putative integral membrane protein CMS_0897 940156 - 939752 - | hypothetical protein CMS_0898 941464 - 940193 - | hypothetical protein TERM 290 941673 - 941624 - R 90 -21.4 -3.27022 | gap 1, overlap 941626 TCCATCCGACACGAA TAGGGCCGCCCGGGCG-TCCCCC AGGAG GGGGAATCGTCCGGGCGGCCCCG TGGGTCGCCTCGTGG TERM 291 941671 - 941626 - R 100 -26.2 -3.20078 | gap 1, overlap 941624 CATCCGACACGAATA GGGCCGCCCGGGCG-TCCCCC AGGAG GGGGAATCGTCCGGGCGGCCC CGTGGGTCGCCTCGT CMS_0899 942961 - 941699 - | hypothetical protein CMS_0900 943557 - 943192 - | putative integral membrane protein TERM 292 943478 - 943458 - G 70 -16.1 -2.64616 | GCCCGAGCGACACGA GCGCGAGCG CGA CGCCCGCGC CGAGCATGATGGCGC CMS_0901 944343 - 943738 - | hypothetical protein CMS_0902 944888 - 944340 - | hypothetical protein CMS_0903 945289 - 944915 - | hypothetical protein CMS_0904 945474 - 945286 - | hypothetical protein CMS_0905 945899 - 945471 - | hypothetical protein CMS_0906 947197 - 946016 - | AraC family transcriptional regulator CMS_0907 948300 - 947359 - | hypothetical protein TERM 293 948575 - 948623 + H 73 -15.4 -3.18383 | gap 1, opp_overlap 948575 GGGGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_0908 948627 - 949589 + | putative insertion element ISCmi2 transposase CMS_0909 950128 - 949586 - | putative integral membrane protein CMS_0910 950378 - 950770 + | putative integral membrane protein CMS_0911 951549 - 950797 - | GntR family transcriptional regulator CMS_0912 951633 - 952163 + | PTS transport system component IIA CMS_0913 952482 - 954587 + | putative PTS transport system EIIIc component/glucosamine-6-phosphate deaminase fusion protein CMS_0916 959009 - 955806 - | alpha-mannosidase CMS_0917 960326 - 959076 - | putative glucosidase TERM 294 960213 - 960192 - G 72 -13.7 -3.41745 | CGCGGAGAACACGAA CGAGGCGCC CGCC AGCGCCTCG TCGAGATCGGTGTGC CMS_0918 961141 - 960416 - | DeoR family transcriptional regulator CMS_0919 961369 - 962391 + | putative carbohydrate kinase CMS_0920 962475 - 963761 + | putative extracellular solute-binding transport protein CMS_0921 963758 - 964792 + | putative integral membrane transport protein CMS_0922 964912 - 965712 + | putative integral membrane transport protein CMS_0923 965709 - 966473 + | glucosamine-6-phosphate deaminase lacZ1 966570 - 969560 + | putative beta-galatosidase CMS_0925 970091 - 969603 - | hypothetical protein CMS_0926 970375 - 970947 + | putative oxidoreductase TERM 295 970951 - 971009 + F 100 -26.7 -2.62616 | gap 1, opp_overlap 970926 GTCTCGGCGTAGTCG CCGACGCACGACGCGAGGGGCCCGGGCG GGAA CGTCCGGGCCCCTCGTGTGG-GCGCGGG TCGTGTGGCGGCTCC CMS_0927 970999 - 971229 + | putative integral membrane protein CMS_0928 971395 - 972408 + | putative substrate-binding transport protein CMS_0929 972483 - 973508 + | putative integral membrane transport protein CMS_0930 973505 - 974275 + | Fe uptake system permease TERM 296 975322 - 975283 - g 72 -14.2 -3.41002 | overlap 975284 975287 975292 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 297 975321 - 975284 - g 73 -17.7 -2.63878 | overlap 975283 975287 975292 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 298 975318 - 975287 - g 73 -18 -2.6072 | overlap 975284 975283 975292 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 299 975313 - 975292 - g 71 -15.1 -3.10677 | overlap 975287 975284 975283 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_0931 974373 - 975335 + | putative insertion element IS1121 transposase CMS_0932 976068 - 975346 - | hypothetical protein TERM 300 976827 - 976883 + G 77 -15.2 -3.50853 | gap 4, overlap 976829 976832 GGATCCACCACGGGC CCGGGCCGCGAGGCC-G-CGGGCC-GTC TGCTC GACCGGCCCGACCGGCC-CACGGCCCTG TTCTGCTTCAACGAC TERM 301 976829 - 976881 + G 79 -16.4 -3.32946 | gap 4, overlap 976827 976832 ATCCACCACGGGCCC GGGCCGCGAGGCC-G-CGGGCC-GTC TGCTC GACCGGCCCGACCGGCC-CACGGCCC TGTTCTGCTTCAACG CMS_0933 976149 - 977180 + | LacI family transcriptional regulator CMS_0934 978139 - 977177 - | putative insertion element ISCmi2 transposase TERM 302 978191 - 978143 - H 73 -15.4 -3.18383 | gap 1, opp_overlap 978143 AGCGTGAGTCACGAA GACCTCCGGTGATGACGTGTGCT TGGT AACTCACATCGTC-CCGGAGGTC TTCGCTATCCGCCCC CMS_0935 978337 - 979635 + | putative substrate-binding transport protein TERM 303 979691 - 979635 - f 100 -31 -2.8598 | gap 1, overlap 979632 ATACACGCAGAAGTA GTCGCGGCGAGCGCTGCCGGCACGACG GGGT CGTCGTGCCGGCAGCGCCCTCCCC-AC GGAAGGAACTGCCAT CMS_0936 979705 - 980721 + | putative integral membrane transport protein CMS_0937 980871 - 981707 + | putative integral membrane transport protein CMS_0938 981713 - 982717 + | hypothetical protein TERM 304 983836 - 983807 - g 74 -11.3 -3.71848 | CGGGTGGATGAACAA CTGGTCGTACCCG AAGG CGGGCCCGACCTG GGAGTCCGACGGCTT CMS_0939 982779 - 984848 + | putative levanase CMS_0940 985206 - 985550 + | hypothetical protein CMS_0941 985774 - 986592 + | putative aquaporin CMS_0942 986683 - 987855 + | hypothetical protein CMS_0945 988990 - 988547 - | putative integral membrane protein CMS_0946 989534 - 989067 - | putative integral membrane protein CMS_0947 990661 - 989531 - | putative integral membrane transport protein CMS_0948 991539 - 990658 - | putative ABC transporter ATP-binding protein CMS_0949 991774 - 992139 + | putative integral membrane protein CMS_0950 993020 - 992130 - | hypothetical protein CMS_0951 993811 - 993017 - | putative oxidoreductase CMS_0952 993871 - 994647 + | putative oxidoreductase CMS_0953 995458 - 994667 - | hypothetical protein TERM 305 996524 - 996544 + G 71 -10.4 -3.82084 | GTGCGCGGCGCCAGC CTCGGCGA GGGCA TCGCCGGG TTCTTGCTGTTCGAG glpT 995609 - 997030 + | glycerol-3-phosphate transporter CMS_0956 997621 - 998301 + | putative oxidoreductase CMS_0957 999384 - 998635 - | putative two-component system response regulator CMS_0958 1000817 - 999381 - | putative two-component system sensor kinase TERM 306 1001693 - 1001727 + r 81 -17 -3.51825 | opp_overlap 1001687, overlap 1001695 CGTAGACGATCTCGT CGCGGCCGTCGCCGTC GAC GTCGGCGACGGCCAGG TTGTGGTTGCCCTGG TERM 307 1001695 - 1001726 + r 74 -18 -2.70774 | gap 1, opp_overlap 1001687, overlap 1001693 TAGACGATCTCGTCG C-GGCCGTCGCCGTC GAC GTCGGCGACGGCCAG GTTGTGGTTGCCCTG CMS_0960 1004912 - 1002942 - | putative secreted glycosyl hydrolase CMS_0961 1005353 - 1006888 + | putative drug efflux protein CMS_0962 1006986 - 1007429 + | hypothetical protein CMS_0963 1008643 - 1007426 - | putative hydrolase CMS_0964 1008706 - 1009152 + | hypothetical protein crtI 1010627 - 1009194 - | putative phytoene dehydrogenase crtE 1011520 - 1010624 - | lycopene elongase CMS_0967 1011587 - 1012783 + | putative glycosyl transferase CMS_0968 1013550 - 1012837 - | putative oxidoreductase CMS_0969 1013623 - 1014162 + | MerR family transcriptional regulator CMS_0970 1014413 - 1014823 + | hypothetical protein CMS_0971 1014816 - 1015016 + | hypothetical protein TERM 308 1015031 - 1015064 + T 95 -22.5 -3.25823 | opp_overlap 1014999 1015033 1015035, overlap 1015033 GCTCGCGATCGACAC CAGAGGGACCCCGCC GCAT GGCGGGGTCCCTCTC TTCGTGTCGGGCACG TERM 309 1015033 - 1015062 + T 100 -25.1 -3.19602 | opp_overlap 1015033 1015035, overlap 1015031 TCGCGATCGACACCA GAGGGACCCCGCC GCAT GGCGGGGTCCCTC TCTTCGTGTCGGGCA TERM 310 1015062 - 1015033 - T 93 -25.1 -2.64616 | opp_overlap 1015033 1015031, overlap 1015035 TCGCGATCGACACCA GAGGGACCCCGCC GCAT GGCGGGGTCCCTC TCTTCGTGTCGGGCA TERM 311 1015060 - 1015035 - T 87 -21.9 -2.8655 | opp_overlap 1015033 1015031, overlap 1015033 GCGATCGACACCAGA GGGACCCCGCC GCAT GGCGGGGTCCC TCTCTTCGTGTCGGG CMS_0972 1015438 - 1015124 - | hypothetical protein CMS_0973 1015644 - 1016111 + | MarR family transcriptional regulator CMS_0974 1016172 - 1016594 + | putative hydroperoxide resistance protein TERM 312 1016810 - 1016842 + G 75 -12.5 -3.61715 | overlap 1016835 CTGTTCGCGCGCTCC CGCCGCGGCCTCGCG GGC TGGGCGGCCGCCGCG TTCTTCACGGCGATC CMS_0975 1016594 - 1017001 + | putative integral membrane protein TERM 313 1017021 - 1017064 + T 74 -17.4 -2.78384 | CCGACCCACTGCTCC GCATCACGGCGAGCGCTCCT CGCC GGGAGTGCCCGCCGTCGTGC TGTGCTCCCGCGGCG CMS_0976 1017700 - 1017080 - | hypothetical protein CMS_0977 1018266 - 1017697 - | hypothetical protein CMS_0978 1018397 - 1018609 + | putative integral membrane protein CMS_0979 1018697 - 1019128 + | hypothetical protein CMS_0981 1021195 - 1020287 - | putative pat-1 homologue CMS_0982 1021401 - 1021195 - | hypothetical protein lip 1022295 - 1021450 - | putative secreted lipase CMS_0984 1023767 - 1022475 - | putative insertion element ISCmi3 transposase TERM 314 1022503 - 1022530 + g 100 -19.2 -4.21194 | opp_overlap 1022497 1022494 AGTAGAGCACGCATT CGCTCGGCTGGG GTGT CCCAGTCGAGCG TTTTGCGTGGTCGGC TERM 315 1023889 - 1023842 - R 100 -22.8 -3.6215 | opp_overlap 1023859, overlap 1023843 1023845 GCAACTCACCCGAAA CCACGATCCCCGCAACCCCCTG AACT CAGGGTGTTGCGGGGACCACGA GAATCCGCCCTTCAG TERM 316 1023888 - 1023843 - R 89 -24.1 -2.76969 | opp_overlap 1023859, overlap 1023842 1023845 CAACTCACCCGAAAC CACGATCCCCGCAACCCCCTG AACT CAGGGTGTTGCGGGGACCACG AGAATCCGCCCTTCA TERM 317 1023886 - 1023845 - R 91 -23.1 -2.92792 | opp_overlap 1023859, overlap 1023843 1023842 ACTCACCCGAAACCA CGATCCCCGCAACCCCCTG AACT CAGGGTGTTGCGGGGACCA CGAGAATCCGCCCTT CMS_0985 1024913 - 1023951 - | putative insertion element ISCmi2 transposase TERM 318 1024966 - 1024917 - R 70 -14.5 -3.18383 | gap 2, opp_overlap 1024917 AGCGTGAGTCACGAA GACCTCCGTGGACGTTGATGAGT GTGGTA ACCCA-CATCGTCC-CGGAGGTC TTCGCTATCCGCCCC CMS_0986 1025799 - 1025038 - | putative secreted lactone hydrolase CMS_0987 1026298 - 1025858 - | hypothetical protein CMS_0988 1026404 - 1026673 + | hypothetical protein CMS_0989 1026763 - 1027893 + | hypothetical protein CMS_0990 1029193 - 1027880 - | putative integral membrane protein CMS_0991 1029264 - 1030199 + | putative ABC transporter, ATP-binding subunit CMS_0992 1030196 - 1031059 + | putative integral membrane ABC transport protein CMS_0993 1031063 - 1032391 + | putative two-component system sensor kinase CMS_0994 1032388 - 1033062 + | putative two-component system response regulator TERM 319 1033236 - 1033189 - f 82 -12.5 -3.97947 | CTGACGGACGACAAA CGCACGGGACGCCGCGATCCG GCCGCT CGGCCGGCGTCGCCCCGCACG GAACCCGCACCACCA TERM 320 1033513 - 1033469 - g 100 -31.6 -3.14564 | gap 1 GCAGGGCGCCACGAA CAC-CGGTGCCGGCGACGGCG GCGA CGCCGCCGCCGGCACCGAGTG CAACGTCGGCATCTC CMS_0995 1033371 - 1034513 + | putative sugar-binding transport protein TERM 321 1034515 - 1034573 + F 100 -34.8 -2.78384 | ACGTCGGCCTCTAGC CGACAT-CGCGGCCGACGGGCGCCCGGC ACCAC GCCGGGCGCCCGTCGGCCGCGCATC-CG TCTCCTCCCGGCGCG CMS_0996 1034636 - 1036180 + | putative sugar-transport ATP-binding protein CMS_0997 1036177 - 1037385 + | putative sugar transport permease CMS_0998 1037452 - 1037784 + | hypothetical protein CMS_0999 1038585 - 1037785 - | putative signal peptidase CMS_1000 1039513 - 1038611 - | hypothetical protein CMS_1001 1040112 - 1039510 - | hypothetical protein CMS_1002 1040749 - 1040204 - | hypothetical protein CMS_1003 1041119 - 1042753 + | putative integral membrane two-component sensor kinase TERM 322 1044619 - 1044589 - g 70 -16.9 -2.62184 | TCGCGGTCGAGATGA TGCGCGACGCCGT GGTCA ACGGCGTCGAGCA GCACGGCGACCGCTT CMS_1004 1042851 - 1044719 + | BCCT family transporter TERM 323 1044740 - 1044768 + F 87 -19.6 -3.14132 | opp_overlap 1044740 GCCACCCACGACGAA GCCGATCCGCGC CCTGA GCGCGGGTCGGC TTCGTCGGCCCGGGC TERM 324 1044768 - 1044740 - f 81 -18.1 -3.22298 | opp_overlap 1044740 GCCACCCACGACGAA GCCGATCCGCGCC CTG AGCGCGGGTCGGC TTCGTCGGCCCGGGC CMS_1005 1044844 - 1045860 + | hypothetical protein CMS_1006 1045916 - 1047094 + | putative nucleotide-binding protein CMS_1007 1048339 - 1047224 - | putative fatty acid desaturase CMS_1008 1049708 - 1048656 - | putative oxidoreductase TERM 325 1049330 - 1049367 + g 70 -12.6 -3.32268 | gap 1 CCATGGCGCCGGGGG CGCCGAGCCCGGGAGGC TGGAT GCC-CTCGGCCGCGGCG TTCTCGCAGTAGTTC CMS_1009 1050481 - 1049750 - | putative integral membrane protein CMS_1010 1050626 - 1051273 + | hypothetical protein TERM 326 1051262 - 1051300 + T 72 -16.6 -2.81464 | GCGGCGGGGCTGCCG CCGGTCGACTGACCGGGG CCC CGCCGGGCGGTCGGCTGG TGTACTGAGTCATGA TERM 327 1051323 - 1051362 + T 72 -14.2 -3.41002 | overlap 1051324 1051327 1051332 AGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTCA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 328 1051324 - 1051361 + T 73 -17.7 -2.63878 | overlap 1051323 1051327 1051332 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTCA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 329 1051327 - 1051358 + T 73 -18 -2.6072 | overlap 1051324 1051323 1051332 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTCA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 330 1051332 - 1051353 + T 71 -15.1 -3.10677 | overlap 1051327 1051324 1051323 GTTGGTGACACTCGG GCCGCGGGC GTCA GCCCGTGGC TTGAGTGGATTCGTT CMS_1012 1055403 - 1052371 - | putative alpha-mannosidase CMS_1013 1056364 - 1055534 - | putative integral membrane transport protein CMS_1014 1057433 - 1056453 - | putative integral membrane transport protein CMS_1015 1058887 - 1057478 - | putative extracellular solute-binding protein CMS_1016 1060443 - 1059109 - | ROK family transcriptional regulator CMS_1017 1060547 - 1061692 + | hypothetical protein RS00183 1061689 - 1061970 + | hypothetical protein TERM 331 1063025 - 1062986 - g 72 -14.2 -3.41002 | overlap 1062987 1062990 1062995 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TGAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 332 1063024 - 1062987 - g 73 -17.7 -2.63878 | overlap 1062986 1062990 1062995 CAACACTGAACGAAT CCACTCAAGCCACGGGC TGAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 333 1063021 - 1062990 - g 73 -18 -2.6072 | overlap 1062987 1062986 1062995 CACTGAACGAATCCA CTCAAGCCACGGGC TGAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 334 1063016 - 1062995 - g 71 -15.1 -3.10677 | overlap 1062990 1062987 1062986 AACGAATCCACTCAA GCCACGGGC TGAC GCCCGCGGC CCGAGTGTCACCAAC CMS_1019 1062076 - 1063038 + | putative insertion element IS1121 transposase CMS_1020 1064362 - 1063049 - | putative integral membrane protein TERM 335 1064697 - 1064727 + G 84 -15.4 -3.75024 | GTGGAACTGGTTCCT CGTCTCGATCGTCC TCG GGCCGATCGCGACG TTCTTCATCGTGACG TERM 336 1064883 - 1064919 + G 70 -14.4 -3.23216 | gap 1 CGACACGGGTCCGTG GATCGCCGCGGC-CGCG CTCG CGCTCGTCGCGGCGGTC TTCCTCGTCCTCCAC CMS_1021 1064500 - 1065015 + | putative integral membrane protein CMS_1022 1066239 - 1065046 - | putative oxidoreductase ery-ORF25 1066385 - 1066879 + | MarR family transcriptional regulator CMS_1024 1067692 - 1066895 - | putative glycosyl transferase CMS_1025 1070367 - 1067689 - | hypothetical protein TERM 337 1070490 - 1070547 + H 72 -16.1 -2.82742 | gap 1, overlap 1070498 1070499 CGCGGCGTGCGCCGG CCCGTCTGCGGCCCGTCCGCGGCCTGCC CGC GACGGGTC-CGGGTGGGCTGACGGCGGG TCATTGTGGCAGGCT CMS_1026 1070620 - 1070877 + | hypothetical protein purC 1071814 - 1070894 - | phosphoribosylaminoimidazole-succinocarboxamide synthase purD 1073061 - 1071811 - | phosphoribosylamine-glycine ligase CMS_1029 1073441 - 1073821 + | hypothetical protein CMS_1030 1073880 - 1074188 + | putative integral membrane protein purF 1075754 - 1074240 - | amidophosphoribosyltransferase purM 1075790 - 1076899 + | phosphoribosylformylglycinamidine cyclo-ligase TERM 338 1077011 - 1076981 - T 76 -18.3 -2.62983 | opp_overlap 1077002 TGCATGCGCACATGA GCGGACCCGCCTC GCGAG GAGGCGGGTCCGG TCACGGTCCGGCGAG CMS_1033 1077265 - 1077041 - | hypothetical protein CMS_1034 1077460 - 1078590 + | putative oxidoreductase CMS_1035 1079486 - 1078923 - | hypothetical protein CMS_1036 1079902 - 1079483 - | putative integral membrane protein CMS_1037 1080795 - 1079899 - | hypothetical protein CMS_1038 1083003 - 1080943 - | putative integral membrane protein CMS_1039 1083757 - 1083092 - | putative integral membrane protein CMS_1040 1083851 - 1085263 + | GntR family regulatory protein TERM 339 1085797 - 1085739 - g 73 -18.1 -2.62616 | gap 1, opp_overlap 1085740 CCACGGCCGACACTA CGGCCACGGGCTCCACGCCGGGGCGCAT CGTC ACGCACCCCGGCCTGGAGTACGTGGGC- ATCCTCTTCTACGTC CMS_1041 1085312 - 1086457 + | hypothetical protein CMS_1042 1086567 - 1088648 + | putative glycogen debranching enzyme TERM 340 1089695 - 1089656 - g 72 -14.2 -3.41002 | overlap 1089657 1089660 1089665 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACT TERM 341 1089694 - 1089657 - g 73 -17.7 -2.63878 | overlap 1089656 1089660 1089665 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 342 1089691 - 1089660 - g 73 -18 -2.6072 | overlap 1089657 1089656 1089665 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 343 1089686 - 1089665 - g 71 -15.1 -3.10677 | overlap 1089660 1089657 1089656 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_1043 1088746 - 1089708 + | putative insertion element IS1121 transposase glgP 1089780 - 1092335 + | putative glycogen phosphorylase CMS_1045 1093459 - 1092398 - | hypothetical protein CMS_1046 1095935 - 1093899 - | putative glycogen debranching enzyme CMS_1047 1095976 - 1097181 + | putative cysteine desulfurase trmU 1097178 - 1098371 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 344 1098844 - 1098810 - g 74 -16.4 -3.14132 | CGGGCTCGCCATCAA CCTCCGCTACGAGCAC GGC GTGCTCGTCACGGCGG CCACGCGCGGCGACG ligA 1098379 - 1100922 + | DNA ligase TERM 345 1101007 - 1100962 - f 84 -18.9 -3.24747 | gap 1, opp_overlap 1100990 1100991 CGTCGATACGATGAA GGCACGCGTCGGCGCGGGCGCG CCT CACCCCGGCGCCGGC-CGTGCC ACGCCGGATTCTGGG CMS_1050 1101092 - 1102405 + | hypothetical protein gatC 1103004 - 1103387 + | glutamyl-tRNA(Gln) amidotransferase subunit C gatA 1103395 - 1104945 + | glutamyl-tRNA(Gln) amidotransferase subunit A gatB 1104945 - 1106447 + | aspartyl/glutamyl-tRNA(asn/Gln) amidotransferase subunit B CMS_1055 1106444 - 1108081 + | putative ABC transporter CMS_1056 1109749 - 1108100 - | putative lipoprotein TERM 346 1108212 - 1108250 + g 70 -13.9 -3.31144 | CCCCAGGCCATCCCC GCGGG-CGCGTCGGCGTGC AGG GCGCGCC-ACGTGGCCTGC TTGTCGGGCTGGCCG CMS_1057 1110568 - 1109759 - | hypothetical protein CMS_1058 1111643 - 1110681 - | putative insertion element ISCmi2 transposase TERM 347 1111695 - 1111647 - R 73 -15.4 -3.18383 | gap 1, opp_overlap 1111647 AGCGTGAGTCACGAA GACCTCCGGTGATGACGTGTGCT TGGT AACTCACATCGTC-CCGGAGGTC TTCGCTATCCGCCCC fadD 1113437 - 1111740 - | long-chain-fatty-acid--CoA ligase CMS_1060 1113951 - 1113505 - | hypothetical protein CMS_1062 1118565 - 1114408 - | Ftsk/SpoIIIE family protein CMS_1063 1119455 - 1118562 - | hypothetical protein TERM 348 1119371 - 1119324 - G 74 -16.3 -3.15544 | GGCGAGCTGGACGAA GCCGACGCG-TCGGGACACGGGC AACG GCACGCG-CACGACCGCGTCGGC CTCGGTCGCCTCGCG CMS_1064 1120768 - 1119458 - | putative integral membrane protein CMS_1065 1121022 - 1120765 - | hypothetical protein CMS_1066 1122169 - 1121012 - | hypothetical protein CMS_1067 1122357 - 1122698 + | hypothetical protein CMS_1068 1122717 - 1123031 + | hypothetical protein CMS_1069 1123037 - 1124059 + | hypothetical protein CMS_1070 1124056 - 1124445 + | hypothetical protein CMS_1071 1124426 - 1124794 + | hypothetical protein CMS_1072 1124827 - 1127109 + | hypothetical protein CMS_1073 1127166 - 1127567 + | hypothetical protein CMS_1074 1127659 - 1127724 + | hypothetical protein CMS_1075 1127755 - 1127868 + | hypothetical protein CMS_1076 1127952 - 1128092 + | hypothetical protein CMS_1077 1128194 - 1128499 + | hypothetical protein CMS_1078 1128555 - 1128755 + | hypothetical protein CMS_1079 1130238 - 1128790 - | putative oxidoreductase CMS_1080 1131246 - 1130248 - | putative oxidoreductase CMS_1081 1133087 - 1131345 - | long-chain-fatty-acid--CoA ligase TERM 349 1133075 - 1133051 - G 93 -22.9 -3.14468 | CCCCACCATAGGGAA TGCGCCCGGGC GTG GCCCGGGCGCA TCGGCCGTCCATCGA CMS_1082 1134057 - 1133098 - | putative oxidoreductase CMS_1083 1134154 - 1134501 + | hypothetical protein CMS_1084 1134498 - 1135736 + | putative hydrolase TERM 350 1135781 - 1135829 + F 73 -15.4 -3.18383 | gap 1, opp_overlap 1135781 GGGGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_1085 1135833 - 1136795 + | putative insertion element ISCmi2 transposase CMS_1086 1136853 - 1138946 + | putative dipeptidyl-peptidase CMS_1087 1139666 - 1138965 - | putative haloacid dehalogenase CMS_1088 1140447 - 1139722 - | hypothetical protein CMS_1089 1140555 - 1142309 + | pyruvate dehydrogenase CMS_1090 1142372 - 1142689 + | hypothetical protein CMS_1091 1143784 - 1142705 - | putative integral membrane zinc-binding dehydrogenase CMS_1092 1143834 - 1144208 + | putative integral membrane protein CMS_1093 1144962 - 1144171 - | hypothetical protein CMS_1094 1146053 - 1144962 - | hypothetical protein CMS_1095 1146475 - 1148541 + | putative helicase TERM 351 1148603 - 1148563 - f 100 -26.3 -2.62263 | opp_overlap 1148556 ACCGGCTCTACACGA CGATGCCCGGGCTATCTCA ACT CGAGGTAGCCCGGGCATCG TCGCATGGAACTCCT CMS_1096 1148699 - 1148830 + | hypothetical protein TERM 352 1148818 - 1148833 + T 75 -3.2 -4.55491 | GAAGGCGCGGGTGCG CCGTGA ACTT TGACGG TTTTCTGATTCAGTA CMS_1097 1149469 - 1148843 - | hypothetical protein TERM 353 1149771 - 1149818 + H 100 -22.8 -3.6215 | opp_overlap 1149788, overlap 1149772 1149774 ACCTGCGGCGGATTC TCGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTGG TTTCGGGTGAGTTGC TERM 354 1149772 - 1149817 + H 89 -24.1 -2.76969 | opp_overlap 1149788, overlap 1149771 1149774 CCTGCGGCGGATTCT CGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTG GTTTCGGGTGAGTTG TERM 355 1149774 - 1149815 + H 91 -23.1 -2.92792 | opp_overlap 1149788, overlap 1149772 1149771 TGCGGCGGATTCTCG TGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCG TGGTTTCGGGTGAGT TERM 356 1151157 - 1151130 - g 100 -19.2 -4.21194 | opp_overlap 1151123 1151120 GCCGACCACGCAAAA CGCTCGACTGGG ACAC CCCAGCCGAGCG AATGCGTGCTCTACT CMS_1099 1149893 - 1151185 + | putative insertion element ISCmi3 transposase CMS_1100 1151486 - 1151265 - | hypothetical protein TERM 357 1151435 - 1151422 - G 79 -2.3 -4.74706 | overlap 1151423 GCGAAGAGGTAAAAA GCGGT GATG ACAGC GGTGAGCACGACAGC CMS_1100A 1151571 - 1151479 - | hypothetical protein CMS_1100B 1151955 - 1151686 - | hypothetical protein CMS_1100C 1152238 - 1152062 - | hypothetical protein CMS_1101 1153662 - 1152289 - | putative integral membrane transport protein CMS_1101A 1154667 - 1153777 - | hypothetical protein thiED 1157099 - 1154841 - | multifunctional protein thied [includes: thiamine-phosphate pyrophosphorylase (tmp pyrophosphorylase) (tmp-ppase) (thiamine-phosphate synthase); phosphomethylpyrimidine kinase (hmp-phosphate kinase) (hmp-p kinase) TERM 358 1156152 - 1156191 + g 77 -16.4 -3.28712 | gap 1, opp_overlap 1156152 CTGCGCGCGCAGGAA CGCGACGGGCGGCACGTGG ATC TCGCG-GACGCCCGTCGTG TTCTGCGCGACGAGC thiM 1157923 - 1157096 - | hydroxyethylthiazole kinase CMS_1104 1158298 - 1158453 + | hypothetical protein TERM 359 1158866 - 1158877 + F 70 -2.2 -4.43877 | ACTGTCTCCGTATGG GTTC GAAT GGAC TTTATTTCGGAATTG CMS_1105 1159213 - 1159353 + | hypothetical protein CMS_1106 1159630 - 1159770 + | hypothetical protein CMS_1107 1162156 - 1159991 - | putative protease CMS_1108 1162393 - 1162166 - | hypothetical protein CMS_1109 1163915 - 1162467 - | putative maltokinase CMS_1110 1164209 - 1163940 - | hypothetical protein xyoA 1165608 - 1164322 - | xylitol oxidase TERM 360 1165652 - 1165679 + r 79 -19.2 -2.80113 | CCGTCGTCTCCAGCT TGCTCGCCCTCC GGCC GGAGGGCGAGCG TGTCGTGCGGTCGTG lacZ2 1168796 - 1165743 - | beta-galactosidase CMS_1113 1169901 - 1168933 - | putative integral membrane transport protein TERM 361 1169822 - 1169839 + g 71 -4.8 -4.2679 | gap 1, overlap 1169830 CTCACCTTCGCCTCG GCG-GCC TGGGC GGCGCGC TTTTGCTCCGCCTTC CMS_1114 1170914 - 1169898 - | putative integral membrane transport protein TERM 362 1170027 - 1169994 - G 73 -15.9 -3.26433 | opp_overlap 1170015 1170023, overlap 1169982 GAACGACAGCACGAA CGCGGCGAGGGCGAT GATG ACCGCCTGCGCCGCG GCGACGCCGTAGTCG CMS_1117 1172646 - 1172386 - | hypothetical protein CMS_1118 1172830 - 1173261 + | hypothetical protein TERM 363 1173648 - 1173592 - g 73 -15.2 -3.18681 | gap 2 CGCGAACTTCATCAA CAC-CGCCGTCGTC-GCGACCGTCAACT TCA AGGTGACGGGCACCGAGGACGGCGTGCG CCGCGCCGTGCAGCG CMS_1119 1173293 - 1174744 + | hypothetical protein TERM 364 1174807 - 1174860 + G 70 -16.8 -2.77523 | overlap 1174806 1174805 1174854 GCGTGAGATCCACGA GCCCGTTC-CGGGCGTTGTGGGGCGC GAAC GCGCTCTCCAAC-CTCGCGGACGGGC TCGTCTTCGTCACCA CMS_1120 1174794 - 1176002 + | putative integral membrane efflux protein CMS_1122 1177147 - 1176794 - | hypothetical protein TERM 365 1177039 - 1177065 + g 73 -18 -2.62184 | opp_overlap 1177033 1177031 TCAAGTACAGCGTCG TCGTGCCGCTGG CGG CCTGCGGCACGA TGGTCTGGGCAGAGG CMS_1123 1178339 - 1177590 - | hypothetical protein CMS_1124 1179481 - 1178549 - | hypothetical protein TERM 366 1179526 - 1179482 - R 74 -16.9 -3.05384 | overlap 1179505 1179506 TCTCCTCCCAGGCAA CGCCTGCGCGACGCCCGCGAC AAG GGCGCGGGCGTCCCGGTGGAG GCGCGCGTCAGGCGT CMS_1125 1180265 - 1179534 - | hypothetical protein CMS_1126 1180393 - 1181292 + | putative integral membrane tranport protein CMS_1127 1181332 - 1181700 + | hypothetical protein TERM 367 1181751 - 1181776 + T 93 -21.9 -3.16683 | CCCGCGACGACGGAG GGCCGGAGGGG TGAT CCCCTCCGGCC TTCGTGCGCTCGCGT CMS_1128 1182713 - 1181817 - | putative oxidoreductase CMS_1129 1183053 - 1182760 - | hypothetical protein CMS_1130 1183385 - 1183050 - | hypothetical protein CMS_1131 1183592 - 1183437 - | hypothetical protein CMS_1132 1183914 - 1183594 - | hypothetical protein CMS_1133 1184118 - 1185704 + | putative pyridoxal-dependent decarboxylase CMS_1134 1185701 - 1187083 + | putative monooxygenase CMS_1135 1187080 - 1189593 + | putative siderophore biosynthesis protein TERM 368 1189612 - 1189651 + T 93 -25 -2.62396 | CCCGGCCCGCGCATG CGAGGAGCCGCCGCCCGC TGCT GCGGACGACGGCTCCTCG TCGTGTGGGCGCCTC CMS_1136 1190145 - 1189681 - | putative heat shock protein CMS_1137 1190679 - 1190281 - | hypothetical protein CMS_1138 1190761 - 1191453 + | putative oxidoreductase CMS_1139 1191569 - 1192219 + | MarR family transcriptional regulator NCU06945.1 1192216 - 1193160 + | hypothetical protein CMS_1142 1195447 - 1194263 - | putative integral membrane protein CMS_1141 1193299 - 1194315 + | putative oxidoreductase CMS_1143 1195521 - 1197122 + | hypothetical protein CMS_1144 1197119 - 1198786 + | putative carboxylesterase CMS_1145 1198854 - 1200086 + | putative low-affinity phosphate transport protein CMS_1146 1200083 - 1200334 + | hypothetical protein CMS_1147 1200456 - 1201931 + | putative permease CMS_1148 1202027 - 1203304 + | putative metal ion transport protein CMS_1149 1203866 - 1203351 - | hypothetical protein CMS_1150 1204054 - 1204800 + | putative glycosyl transferase CMS_1151 1205692 - 1204841 - | hypothetical protein TERM 369 1206791 - 1206775 - g 70 -13.7 -3.25823 | GCTCGGCGAGATCAA CCTGCCG CCG CGGCAGG CGGGATCCAGCATCA aspA 1205798 - 1207315 + | aspartate ammonia-lyase (aspartase) TERM 370 1207365 - 1207336 - T 87 -22.1 -2.82516 | CCCGGGACGACGACA GCGCGCCGCGGCC CGAG GGCTGCGGCGCGC TGTCGCGTGCGGGGT CMS_1153 1208395 - 1207394 - | putative repetative protein CMS_1154 1208576 - 1208439 - | hypothetical protein CMS_1155 1209484 - 1208606 - | putative hydrolase CMS_1158 1212159 - 1213178 + | hypothetical protein TERM 371 1213208 - 1213247 + T 72 -14.2 -3.41002 | overlap 1213209 1213212 1213217 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 372 1213209 - 1213246 + T 73 -17.7 -2.63878 | overlap 1213208 1213212 1213217 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 373 1213212 - 1213243 + T 73 -18 -2.6072 | overlap 1213209 1213208 1213217 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 374 1213217 - 1213238 + T 71 -15.1 -3.10677 | overlap 1213212 1213209 1213208 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_1159 1214157 - 1213195 - | putative insertion element IS1121 transposase CMS_1160 1214362 - 1214565 + | hypothetical protein CMS_1161 1215493 - 1214570 - | putative DNA glycosylase TERM 375 1216234 - 1216268 + G 75 -12.9 -3.62046 | CCGTCCGCCTCCGCC CGCTGCCGACCG-CGAC GCC GTCGACGGTCGCC-GCG TTCTTCCCGGACTCC CMS_1162 1215552 - 1216979 + | putative oxidoreductase CMS_1163 1217124 - 1218308 + | putative integral membrane protein CMS_1164 1218442 - 1218675 + | hypothetical protein CMS_1165 1218763 - 1219383 + | putative DNA-invertase (site-specific recombinase) CMS_1166 1219575 - 1220864 + | putative carboxypeptidase CMS_1167 1221564 - 1220902 - | putative two-component response regulator CMS_1168 1222727 - 1221561 - | putative two-component system sensor kinase TERM 376 1222823 - 1222879 + r 81 -18.5 -3.0438 | overlap 1222824 1222864 TAGGCGCGGCCCCTC GGCCGGGTCGCCCCTCGCGGGTACCGG GAT CCGGTACCCGCGAGGGAGGGGCGTCCC TACTTCTTCTTCGTC TERM 377 1222824 - 1222882 + r 82 -13.2 -3.99374 | gap 4, overlap 1222823 1222864 AGGCGCGGCCCCTCG GCCGGGTCGCCCCT--C--GCGGGTACCGG GAT CCGGTACCCGCGAGGGAGGGGCGTCCCTAC TTCTTCTTCGTCAGC CMS_1169 1223088 - 1222879 - | hypothetical protein TERM 378 1223948 - 1223979 + r 84 -21.6 -2.80935 | opp_overlap 1223948 TGCCGTGGAGACACA GCGAGGGCCGCACC AGGT GGTGCGGCCCTCGG TCTGCTGGGTGCGGT TERM 379 1223979 - 1223948 - R 86 -21.6 -2.98823 | opp_overlap 1223948 TGCCGTGGAGACACA GCGAGGGCCGCACC AGGT GGTGCGGCCCTCGG TCTGCTGGGTGCGGT CMS_1171 1224556 - 1223996 - | hypothetical protein CMS_1172 1224801 - 1225703 + | hypothetical protein CMS_1173 1225788 - 1226324 + | putative protease TERM 380 1226327 - 1226371 + F 88 -20.8 -3.05384 | gap 1 GCAGCACGCCTGACC G-GCGCCTAGGGTGAGGGCGT GACC ACGCCCTCACCCGACGCGCGC TTCCGTCAGACCACG CMS_1174 1226345 - 1226875 + | hypothetical protein CMS_1175 1226885 - 1227487 + | putative signal peptidase CMS_1176 1227510 - 1228343 + | 2,5-diketo-D-gluconic acid reductase CMS_1177 1229134 - 1228412 - | putative integral membrane protein apt 1229199 - 1229774 + | adenine phosphoribosiltransferase CMS_1179 1231107 - 1229842 - | hypothetical protein CMS_1180 1231351 - 1231812 + | putative integral membrane protein CMS_1181 1231936 - 1234218 + | hypothetical protein CMS_1182 1234405 - 1235916 + | putative symporter CMS_1183 1236960 - 1236202 - | hypothetical protein CMS_1184 1238345 - 1236957 - | putative integral membrane transport protein CMS_1185 1238513 - 1238782 + | 30S ribosomal protein S15 TERM 381 1238817 - 1238859 + F 95 -22.1 -3.25823 | gap 1, overlap 1238818 ATCGCATCGCGACCG AGCG-GACGAGCCGTCACCC TCCG GGGTGGCGGCTCGTCTCGCG TTAATGTCCGCGACG TERM 382 1238818 - 1238858 + F 100 -25.6 -2.55351 | gap 1, overlap 1238817 TCGCATCGCGACCGA GCG-GACGAGCCGTCACCC TCCG GGGTGGCGGCTCGTCTCGC GTTAATGTCCGCGAC CMS_1186 1239259 - 1241532 + | guanosine pentaphosphate synthetase/polyribonucleotide nucleotidyltransferase TERM 383 1241544 - 1241602 + T 100 -28.3 -2.74488 | gap 1, opp_overlap 1241555, overlap 1241598 CTAGGCCCTCTCGCA -CCCGCACGAAACGGATGCCCGTCCCAC CTCG GTGGGGCGGGCATCCGTCATGTGCGGGC TACTTCCCGTCGTTC TERM 384 1241590 - 1241555 - T 100 -24.8 -3.73775 | opp_overlap 1241544 CGCACCCGCACGAAA CGGATGCCCGTCCCAC CTCG GTGGGGCGGGCATCCG TCATGTGCGGGCTAC CMS_1187 1241982 - 1241602 - | hypothetical protein TERM 385 1241926 - 1241949 + g 71 -15.2 -3.14564 | GAGGCGCCGGGGCCG GGCGCGGGCG GCGT CGCCCTCGCC TTCGTCCGCCGGTCG CMS_1188 1242535 - 1242005 - | hypothetical protein CMS_1189 1242946 - 1244085 + | putative oxidoreductase CMS_1190 1244361 - 1244801 + | hypothetical protein CMS_1191 1244798 - 1245712 + | putative secreted protein CMS_1192 1245767 - 1247131 + | putative protease CMS_1193 1247140 - 1247742 + | putative phosphoglycerate mutase CMS_1194 1247801 - 1248634 + | putative dihydrodipicolinate reductase CMS_1195 1248634 - 1249083 + | hypothetical protein CMS_1196 1250053 - 1249133 - | hypothetical protein CMS_1197 1250150 - 1250941 + | thymidylate synthase CMS_1198 1250976 - 1251959 + | dihydrodipicolinate synthase CMS_1199 1252019 - 1253701 + | hypothetical protein CMS_1201 1254938 - 1255645 + | putative ABC transporter ATP-binding protein CMS_1202 1255642 - 1256874 + | putative integral membrane protein ftsK 1256874 - 1259789 + | cell division protein/DNA translocase FtsK CMS_1204 1259793 - 1260422 + | putative phosphatidylglycerophosphate synthase CMS_1205 1260419 - 1260940 + | hypothetical protein CMS_1206 1261080 - 1261388 + | putative DNA-binding protein CMS_1207 1261465 - 1261698 + | hypothetical protein recA 1261836 - 1263053 + | recombinase A recX 1263288 - 1264223 + | putative regulatory protein CMS_1210 1264274 - 1265866 + | hypothetical protein CMS_1211 1265863 - 1266786 + | putative tRNA delta(2)-isopentenylpyrophosphate transferase CMS_1212 1266796 - 1267674 + | diaminopimelate epimerase CMS_1213 1268365 - 1267748 - | hypothetical protein TERM 386 1268493 - 1268536 + G 85 -20.2 -3.02511 | opp_overlap 1268471 1268469 1268517 GGACGACGTCGTCGC GCGCGTCCTCGGCCGAGCGG AGAA CCGCTCGGCCGGATACGCCC TCTTCCGCGGATCCG CMS_1214 1268407 - 1269972 + | putative GTP-binding protein TERM 387 1269996 - 1270023 + T 95 -18.4 -3.77196 | opp_overlap 1269996 ACCGCACGCAGCAGA GCGGCCGATCCC CTCG GGGACCGGCCGC TTTCGTACGTCGTGC TERM 388 1270023 - 1269996 - T 83 -20.6 -2.80935 | opp_overlap 1269996 ACCGCACGCAGCAGA GCGGCCGATCCC CTCG GGGACCGGCCGC TTTCGTACGTCGTGC lexA 1270726 - 1270046 - | LexA repressor TERM 389 1271003 - 1270959 - H 100 -26.7 -3.02511 | gap 1, overlap 1270961 TGTATGTTCGGAACA CAGCTTCGCACCCGGCTCTC CCGGCC GAGAGCCGGGTGCGA-GCTG CCGGACCCGCATCGC TERM 390 1271001 - 1270961 - H 95 -23.5 -3.07013 | gap 1, overlap 1270959 TATGTTCGGAACACA GCTTCGCACCCGGCTCTC CCGGCC GAGAGCCGGGTGCGA-GC TGCCGGACCCGCATC CMS_1215A 1271174 - 1271491 + | hypothetical protein hisB 1271593 - 1272201 + | imidazoleglycerol-phosphate dehydratase hisH 1272198 - 1272839 + | imidazole glycerol phosphate synthase subunit HisH priA 1272904 - 1273653 + | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase PriA CMS_1219 1273650 - 1274417 + | hypothetical protein CMS_1220 1274969 - 1274511 - | hypothetical protein TERM 391 1275507 - 1275480 - H 74 -16.4 -3.14132 | gap 1 CGGCTCGCGCAGGAA GC-CGACCTCGAC CTC GTCGAGGTCGCGC CCAATTCCAAGCCCC infC 1275525 - 1275956 + | putative translation initiation factor IF-3 rpmI 1275949 - 1276143 + | 50S ribosomal protein L35 rplT 1276190 - 1276582 + | 50S ribosomal protein L20 TERM 392 1276604 - 1276631 + F 100 -22 -3.36273 | CCACTCCACCGCCGA CGGCGCGTCCCC ATCA GGGGGCGCGCCG TTAGTGTTGCAGGCA CMS_1224 1276646 - 1277446 + | putative rRNA methylase CMS_1225 1277598 - 1278386 + | putative glutamate/aspartate uptake system ATP-binding protein CMS_1226 1278478 - 1279470 + | putative glutamate/aspartate-binding transport protein CMS_1227 1279586 - 1280233 + | putative glutamate permease CMS_1228 1280230 - 1281054 + | putative glutamate permease pheS 1281129 - 1282166 + | putative phenylalanyl-tRNA synthetase alpha chain TERM 393 1282838 - 1282883 + G 74 -16.7 -3.13403 | gap 1, overlap 1282836 1282879 CAGGGGGTCGAGGTG CG-CGTCGACGACGCCGCCCCG ATC CGCGGCCGCGTCGGCGCCGACG TGTTCGTCACGCGCG pheT 1282169 - 1284712 + | putative phenylalanyl-tRNA synthetase beta chain TERM 394 1284735 - 1284771 + F 100 -27.4 -2.78816 | gap 1 CGCACCTGGCGCGAC GCGCGGGCGGGCCCCTC CCGG GAGGGGCC-GCCCGCGC TGTCGTCCGGCCTGC TERM 395 1285756 - 1285710 - g 78 -17.8 -3.06796 | overlap 1285712 CGTCACGGGATCCAA CACCGCGCTCGTGGGCCTCGCC ATC GACGAGGCCGCCGGGCGCGTCG TCACGGTCACGGCCA TERM 396 1285754 - 1285712 - g 74 -16.8 -3.09327 | overlap 1285710 TCACGGGATCCAACA CCGCGCTCGTGGGCCTCGCC ATC GACGAGGCCGCCGGGCGCGT CGTCACGGTCACGGC argC 1284829 - 1285878 + | putative N-acetyl-gamma-glutamyl-phosphate reductase argJ 1285875 - 1287029 + | putative glutamate N-acetyltransferase TERM 397 1287485 - 1287542 + G 81 -19.7 -2.64933 | gap 1 GGGCTCTTCACCGGC CGCCGCCG-CGGTGCCGTGGTCGACGGC GTC GAGGTCGACCTCGGCCTCGTCGGCGACG TCGTGTCGGTGGATC argB 1287029 - 1287964 + | putative acetylglutamate kinase argD 1287961 - 1289178 + | putative acetonitrile aminotransferase argF 1289326 - 1290249 + | ornithine carbamoyltransferase argG 1290298 - 1291551 + | putative argininosuccinate synthase argH 1291556 - 1293037 + | putative argininosuccinate lyase CMS_1238 1293034 - 1293171 + | hypothetical protein CMS_1239 1293179 - 1293793 + | putative 3-methyladenine DNA glycosylase CMS_1240 1294411 - 1293812 - | putative integral membrane protein CMS_1241 1295079 - 1294408 - | putative DNA-binding protein tyrS 1295298 - 1296626 + | tyrosyl-tRNA synthetase TERM 398 1296686 - 1296650 - f 86 -20.9 -2.92463 | opp_overlap 1296650 1296653, overlap 1296653 CCTACCAGCTATACA CCACGACATCCCCGGCG ACA CGCCCGGGATGTCGTTG GTTTTGCGGGGGTGG TERM 399 1296650 - 1296687 + F 100 -20.7 -4.08767 | gap 1, opp_overlap 1296650 1296653, overlap 1296653 CCTACCAGCTATACA CC-ACGACATCCCCGGCG ACA CGCCCGGGATGTCGTTGG TTTTGCGGGGGTGGG TERM 400 1296683 - 1296653 - f 84 -21.2 -2.70528 | opp_overlap 1296650 1296653, overlap 1296650 ACCAGCTATACACCA CGACATCCCCGGCG ACA CGCCCGGGATGTCG TTGGTTTTGCGGGGG TERM 401 1296653 - 1296683 + F 93 -21.2 -3.66908 | opp_overlap 1296653 1296650, overlap 1296650 ACCAGCTATACACCA CGACATCCCCGGCG ACA CGCCCGGGATGTCG TTGGTTTTGCGGGGG TERM 402 1298914 - 1298940 + F 71 -5.1 -4.30719 | gap 1, overlap 1298910 1298920 TTGGGTCCTGAGGGA CCGGGCCGCACC TTTT GGTGTG-TCTGG TTTCTTGTCGGACCC TERM 403 1302541 - 1302503 - f 74 -14.4 -3.45832 | opp_overlap 1302505 1302509 TAACTTGAGAACGAA CGGGGAGGCCCGTCGCAC ATC GTGCGGCGGGCCTTTCTG CGTTAACACGGCCTC TERM 404 1302505 - 1302539 + F 86 -22.2 -2.52464 | opp_overlap 1302503, overlap 1302509 ACTTGAGAACGAACG GGGAGGCCCGTCGCAC ATC GTGCGGCGGGCCTTTC TGCGTTAACACGGCC TERM 405 1302509 - 1302535 + F 100 -21.6 -3.97368 | opp_overlap 1302503, overlap 1302505 GAGAACGAACGGGGA GGCCCGTCGCAC ATC GTGCGGCGGGCC TTTCTGCGTTAACAC CMS_1243 1303366 - 1304664 + | hypothetical protein CMS_1244 1304654 - 1305694 + | hypothetical protein CMS_1245 1305704 - 1305931 + | hypthetical protein CMS_1246 1305924 - 1306796 + | hypothetical protein ppnK 1306793 - 1307719 + | putative inorganic polyphosphate/ATP-NAD kinase recN 1307712 - 1309427 + | putative DNA repair protein RecN pyrG 1309501 - 1311243 + | putative CTP synthase CMS_1250 1311240 - 1311941 + | putative nudix hydrolase CMS_1251 1311938 - 1312924 + | XerD family recombinase parA 1312997 - 1313881 + | putative chromosome partitioning protein CMS_1253 1313865 - 1314731 + | hypothetical protein CMS_1254 1314721 - 1315332 + | hypothetical protein rsuA 1315316 - 1316191 + | putative RNA pseudouridine synthase CMS_1256 1316188 - 1317306 + | putative prephenate dehydrogenase cmk 1317435 - 1318046 + | putative cytidylate kinase CMS_1258 1318087 - 1319595 + | putative GTP binding protein TERM 406 1319619 - 1319658 + T 72 -14.2 -3.41002 | overlap 1319620 1319623 1319628 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 407 1319620 - 1319657 + T 73 -17.7 -2.63878 | overlap 1319619 1319623 1319628 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 408 1319623 - 1319654 + T 73 -18 -2.6072 | overlap 1319620 1319619 1319628 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 409 1319628 - 1319649 + T 71 -15.1 -3.10677 | overlap 1319623 1319620 1319619 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_1259 1320568 - 1319606 - | putative insertion element IS1121 transposase CMS_1260 1321722 - 1320739 - | putative pat-1 homologue CMS_1261 1323216 - 1321819 - | putative monooxygenase TERM 410 1323316 - 1323275 - R 100 -29.7 -3.14564 | gap 1 GCATGCCGTCACGAA CCGACATGGGATGCGCCTGC GTC GCAGGCGCATCCCATG-CGG CGCAGTCCAGGCTGA CMS_1262 1324116 - 1323343 - | putative pat-1 homologue CMS_1263 1324473 - 1325012 + | putative integral membrane protein TERM 411 1325176 - 1325209 + F 72 -14.5 -3.32769 | overlap 1325167 TCAGCCCGACGGACA TGCCTCGGAAGGACC TAGC GGTCCGGCCGGGGCA TTCGTCATTTGCGGC CMS_1264 1325455 - 1326645 + | putative DNA-binding protein TERM 412 1326712 - 1326738 + T 88 -7.8 -4.77173 | GGCCATGTTGCGCGC GGCTGAAGGCAC GCC GGGCCCTCCGCC TTTGTTTTATCCGCC CMS_1265 1327235 - 1326981 - | hypothetical protein CMS_1266 1327342 - 1328643 + | hypothetical protein CMS_1267 1330306 - 1328651 - | hypothetical protein CMS_1268 1331876 - 1330350 - | hypothetical protein CMS_1269 1332458 - 1331997 - | putative acetyltransferase CMS_1270 1332703 - 1334355 + | putative solute-binding transport protein CMS_1271 1334393 - 1335331 + | putative integral membrane transport protein CMS_1272 1335328 - 1336176 + | putative integral membrane transport protein CMS_1275 1337867 - 1338940 + | putative monooxygenase CMS_1276 1338937 - 1339605 + | hypothetical protein CMS_1277 1339602 - 1340234 + | hypothetical protein CMS_1278 1340231 - 1340845 + | hypothetical protein CMS_1279 1341945 - 1340917 - | hypothetical protein CMS_1280 1343601 - 1342081 - | putative integral membrane transport protein TERM 413 1345090 - 1345049 - g 70 -13.8 -3.28924 | gap 3, opp_overlap 1345049 1345059 GACGCTGCGGCACAA GCTCACCGGGCGCGAC--CGG CTG CCGGAGTCGCACCCGGCG-GC GGCGTACCGGGGCGC CMS_1281 1343745 - 1345115 + | putative monooxygenase CMS_1282 1345112 - 1346350 + | putative dioxygenase CMS_1283 1347638 - 1346607 - | hypothetical protein TERM 414 1346747 - 1346769 + g 70 -14.1 -3.26471 | opp_overlap 1346747 CGGATCCGTCGAACA GGGGGGCGC CGGAC GCGCCCTCC TTCATGTCGCAGTCG TERM 415 1347426 - 1347408 - G 70 -13.8 -3.29511 | CTCAGGCGTCCAGAA GGCGACGG CGT CCGCCGCC TCGGCGGCGGATCGC CMS_1284 1347750 - 1348223 + | hypothetical protein CMS_1287 1350521 - 1349904 - | hypothetical protein CMS_1288 1351929 - 1350598 - | two-component sensor kinase CMS_1290 1354256 - 1352652 - | putative integral membrane protein TERM 416 1355424 - 1355381 - R 72 -16.7 -2.89564 | GCGGGACGCCACAGA TCCCGTGCGCGCGACGC-CGC CCGC GCGCGCGACGC-CGCGCGGGA CGAGCGGACGGATCA CMS_1293 1356206 - 1355547 - | hypothetical protein CMS_1294 1356878 - 1356258 - | putative nudix hydrolase TERM 417 1356351 - 1356293 - G 72 -11.5 -3.64703 | CGTGCGCGAGCGAAA GGCGGGCCGCGAC-CGCGATGCGGTGCTC GTC GAGCCCCGCGGCGTGCGCCGCG-CGCACC GCGTCCCCGAGCGCG CMS_1295 1357004 - 1357351 + | putative transcriptional regulator CMS_1296 1358246 - 1357410 - | non-heme haloperoxidase TERM 418 1359867 - 1359921 + G 71 -15 -3.15544 | gap 3, opp_overlap 1359900 CGCCGGGTGGGAGCC CGACGAGGCGACCGCGCTCGC-CGTGC TGAA GCACGCGCGCGAGCGGT-GCC-CGGCG TTCATGCGCGTGCGC CMS_1297 1358422 - 1360086 + | putative acetyl-coenzyme A synthetase CMS_1298 1360212 - 1360880 + | putative transcriptional repressor CMS_1299 1360877 - 1362442 + | hypothetical protein CMS_1300 1362483 - 1363511 + | putative oxidoreductase TERM 419 1363565 - 1363532 - T 93 -24.7 -2.78463 | overlap 1363534 AGGGCCCTGACGACA GATGGCCGCACCGCC CTCG GGCGATGCGGCCATC GGCCTGCGAGCCACC TERM 420 1363563 - 1363534 - T 86 -21.5 -2.94099 | overlap 1363532 GGCCCTGACGACAGA TGGCCGCACCGCC CTCG GGCGATGCGGCCA TCGGCCTGCGAGCCA CMS_1301 1363899 - 1363603 - | hypothetical protein CMS_1302 1364744 - 1364055 - | hypothetical protein TERM 421 1364537 - 1364565 + g 79 -13.7 -3.61398 | CGTCCCGCGCGAGGT CGGCCGCGGCGAG CAG CGCGTCGCCGCCG TTGTTCCCCGCGCCG CMS_1303 1365556 - 1364741 - | hypothetical protein CMS_1304 1366700 - 1365672 - | putative monooxygenase CMS_1305 1368274 - 1366790 - | putative integral membrane transport protein CMS_1306 1368435 - 1370141 + | putative gamma-glutamyltransferase CMS_1307 1370138 - 1370671 + | hypothetical protein CMS_1310 1371403 - 1371771 + | putative integral membrane protein CMS_1311 1371768 - 1372517 + | putative integral membrane phosphatase CMS_1312 1373990 - 1372530 - | putative guanine deaminase CMS_1313 1374854 - 1374201 - | putative integral membrane protein CMS_1314 1375446 - 1374868 - | putative integral membrane protein CMS_1315 1376183 - 1375548 - | putative integral membrane protein CMS_1316 1376271 - 1377488 + | hypothetical protein CMS_1317 1377485 - 1378795 + | putative amino acid transporter CMS_1318 1381709 - 1378815 - | putative oxidoreductase CMS_1319 1382590 - 1381706 - | putative oxidoreductase CMS_1320 1382791 - 1383531 + | hypothetical protein CMS_1321 1383528 - 1383971 + | putative integral membrane protein CMS_1322 1384119 - 1385828 + | hypothetical protein CMS_1323 1385825 - 1386808 + | hypothetical protein CMS_1324 1387359 - 1386916 - | hypothetical protein CMS_1325 1387456 - 1388433 + | hypothetical protein TERM 422 1389480 - 1389441 - g 72 -14.2 -3.41002 | overlap 1389442 1389445 1389450 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACT TERM 423 1389479 - 1389442 - g 73 -17.7 -2.63878 | overlap 1389441 1389445 1389450 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 424 1389476 - 1389445 - g 73 -18 -2.6072 | overlap 1389442 1389441 1389450 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 425 1389471 - 1389450 - g 71 -15.1 -3.10677 | overlap 1389445 1389442 1389441 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_1326 1388531 - 1389493 + | putative insertion element IS1121 transposase CMS_1327 1389975 - 1389538 - | hypothetical protein CMS_1328 1390019 - 1391512 + | putative oxidoreductase CMS_1329 1393046 - 1391562 - | putative integral membrane protein CMS_1330 1393075 - 1394169 + | putative oxidoreductase CMS_1331 1394689 - 1394210 - | hypothetical protein TERM 426 1395708 - 1395747 + Gr 72 -14.2 -3.41002 | overlap 1395709 1395712 1395717 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 427 1395709 - 1395746 + Gr 73 -17.7 -2.63878 | overlap 1395708 1395712 1395717 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 428 1395712 - 1395743 + Gr 73 -18 -2.6072 | overlap 1395709 1395708 1395717 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 429 1395717 - 1395738 + Gr 71 -15.1 -3.10677 | overlap 1395712 1395709 1395708 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_1333 1396657 - 1395695 - | putative insertion element IS1121 transposase CMS_1332 1394730 - 1395764 + | hypothetical protein CMS_1334 1398392 - 1396755 - | putative monophosphatase/phosphodiesterase bifunctional enzyme CMS_1335 1399624 - 1398389 - | putative ABC transporter ATP-binding protein TERM 430 1398819 - 1398770 - G 74 -16.3 -3.14564 | gap 1, opp_overlap 1398811 CGAGGTCGGGACGAA GGCCGC-GGGCGCGACGGCCGTGA GGG TCTCGGGCGTCGTGCCCTGCAGGC GCGGCGCGGGCAGCA CMS_1336 1400447 - 1399632 - | putative inner membrane transport protein CMS_1337 1401277 - 1400447 - | putative inner membrane transport protein CMS_1338 1402563 - 1401397 - | putative substrate-binding transport protein TERM 431 1402591 - 1402607 + r 72 -12.3 -3.68529 | CTTCTGCTGGGGGAG CGATGCG GAT CGCATCG TTTCGATGGTCGGGT CMS_1341 1404614 - 1403796 - | hypothetical protein CMS_1342 1404934 - 1404653 - | hypothetical protein CMS_1343 1405981 - 1404935 - | putative metalloprotease CMS_1344 1406797 - 1406075 - | putative two-component response regulator CMS_1345 1408506 - 1406794 - | putative two-component sensor kinase TERM 432 1407159 - 1407202 + g 70 -13.9 -3.29461 | gap 2 GTCCGCGGTCGTCCC CG-CG-CGCTGTGGCGGCGGA CGGG TCCGCCGCCGCATCGATGGCG TTGTCGACGAGGTTC CMS_1346 1408714 - 1410099 + | putative sodium:dicarboxylate symporter CMS_1347 1410188 - 1410670 + | hypothetical protein CMS_1348 1410670 - 1411371 + | MerR family transcriptional regulator TERM 433 1412044 - 1412022 - g 70 -14.2 -3.21099 | opp_overlap 1412034, overlap 1412023 CCTCTGCACCAGCAA CGACGAGGTC ATC GACCTCGTCA GCCGCGGCCAGGGCG CMS_1349 1411624 - 1412181 + | hypothetical protein TERM 434 1412359 - 1412335 - T 84 -19.3 -3.21099 | GCCTCGGACGATGAA CGCCGCCCCTC GAG GAGGAGCGGCG TCCGGGGAGCGAGCG CMS_1350 1413153 - 1412377 - | putative chromosome partitioning protein pyc 1413268 - 1416669 + | pyruvate carboxylase CMS_1352 1416673 - 1418145 + | putative nucleotide-disulphide oxidoreductase CMS_1353 1418180 - 1418671 + | peptide deformylase CMS_1354 1420541 - 1418715 - | putative long chain fatty acid CoA ligase CMS_1355 1420674 - 1421639 + | ROK family regulator CMS_1356 1421720 - 1422409 + | putative phospholipid/glycerol acyltransferase aroH 1422469 - 1423839 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 435 1423879 - 1423926 + F 100 -22.8 -3.6215 | opp_overlap 1423896, overlap 1423880 1423882 CCCCTGGGCGGATTC TCGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTGG TTTCGGGTGAGTTGC TERM 436 1423880 - 1423925 + F 89 -24.1 -2.76969 | opp_overlap 1423896, overlap 1423879 1423882 CCCTGGGCGGATTCT CGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTG GTTTCGGGTGAGTTG TERM 437 1423882 - 1423923 + F 91 -23.1 -2.92792 | opp_overlap 1423896, overlap 1423880 1423879 CTGGGCGGATTCTCG TGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCG TGGTTTCGGGTGAGT TERM 438 1425265 - 1425238 - g 100 -19.2 -4.21194 | opp_overlap 1425231 1425228 GCCGACCACGCAAAA CGCTCGACTGGG ACAC CCCAGCCGAGCG AATGCGTGCTCTACT CMS_1358 1424001 - 1425293 + | putative insertion element ISCmi3 transposase CMS_1359 1427294 - 1425369 - | putative serine/threonine protein kinase CMS_1360 1428681 - 1427401 - | putative peptidoglycan-binding protein CMS_1361 1428924 - 1429235 + | putative DNA-binding protein CMS_1362 1430409 - 1429288 - | putative polyprenyl synthetase CMS_1363 1430487 - 1430882 + | hypothetical protein TERM 439 1430924 - 1430958 + F 100 -30.2 -2.62184 | overlap 1430927 CCCTCCACTCGACCC GAAGGGGCCGATCCCG AAC CGGGATCGGCCCCTTC TCGTGTCCCCAGCAC TERM 440 1430927 - 1430955 + F 100 -26.1 -3.46602 | overlap 1430924 TCCACTCGACCCGAA GGGGCCGATCCCG AAC CGGGATCGGCCCC TTCTCGTGTCCCCAG TERM 441 1430992 - 1431029 + F 90 -20.5 -3.39327 | CCGCATCTCTCCCCG GCGCTCCCCGTGCGGTC CCTC GACCGCTCGCGGGGCGC TTCTGCGTGTCCGCG mraZ 1431221 - 1431652 + | hypothetical protein mraW 1431756 - 1432712 + | S-adenosyl-methyltransferase CMS_1366 1432709 - 1433383 + | hypothetical protein CMS_1367 1433548 - 1435257 + | penicillin binding protein murE 1435270 - 1436814 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murF 1436771 - 1438225 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-alanyl ligase mraY 1438219 - 1439328 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 1439331 - 1440875 + | UDP-N-acetylmuramoylalanine-D-glutamate ligase ftsW 1440832 - 1442121 + | putative cell division protein FtsW murG 1442118 - 1443221 + | UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase murC 1443269 - 1444699 + | UDP-N-acetylmuramoyl-L-alanine ligase ftsQ 1445119 - 1445946 + | cell division protein FtsQ TERM 442 1446800 - 1446855 + G 70 -16 -2.64616 | gap 1, opp_overlap 1446791 CATCAAGGCCGCCGA GCTCGCGGT-CGCGTCGCCGCTGCTCG AGG CGAGCATCGAGGGCGCGCACGGCGTGC TGCTCTCGATCCAGG TERM 443 1447015 - 1446976 - g 72 -16.5 -2.80816 | gap 1, overlap 1446952 CGGTCATCGACGACA CCCTCGGCGACGA-GGTG CGCGT CACCGTCATCGCCGCGGG CTTCGACGGCGGCGA TERM 444 1447081 - 1447052 - g 70 -13.5 -3.33261 | gap 1, opp_overlap 1447054 CTCCAAGGTCGAGAA CCG-CCGCAGCGGC TTC GTCGCCGCGGGCGG AGGAGCGGTCGCCGC ftsZ 1446084 - 1447223 + | cell division protein FtsZ CMS_1377 1447310 - 1447951 + | hypothetical protein CMS_1378 1448027 - 1448494 + | hypothetical protein TERM 445 1448511 - 1448553 + F 100 -25.7 -3.52896 | gap 1, overlap 1448513 CCACCGCGCCCCCGA G-ATGGCGGGCGCCGACGGG ACCT CCCATCGGCGCCCGCCATAC TTCTGTCCGTGCTCA TERM 446 1448513 - 1448550 + F 100 -28.5 -2.89793 | overlap 1448511 ACCGCGCCCCCGAGA TGGCGGGCGCCGACGGG ACCT CCCATCGGCGCCCGCCA TACTTCTGTCCGTGC CMS_1379 1448562 - 1448861 + | hypothetical protein TERM 447 1449157 - 1449135 - g 70 -13.4 -3.44051 | CCTCCACCAGGAGAA CGAGGAGCTG CGC CAGCGCCTCG GCTCGGGCGACGCCG CMS_1380 1448908 - 1449651 + | putative cell division protein TERM 448 1449672 - 1449727 + F 87 -22.7 -2.70932 | gap 2 CACCACCCGCACGCC CGACGGCGGCGTGGGA-CTC-AGGCTC CAGC GAGCCACGGGGTCCCGCGTCGCCGTCG TCGTTCGCGCAGCCA rlu 1449682 - 1450710 + | putative ribosomal large subunit pseudouridine synthase dnaE 1450787 - 1454299 + | DNA polymerase III alpha chain CMS_1383 1454981 - 1454406 - | putative flavin-dependent reductase hisD 1454980 - 1456287 + | histidinol dehydrogenase CMS_1385 1456305 - 1456778 + | hypothetical protein pyrD 1456836 - 1457876 + | dihydroorotate dehydrogenase CMS_1387 1458500 - 1457907 - | putative integral membrane protein TERM 449 1459017 - 1459057 + G 74 -16.8 -3.13403 | overlap 1459015 GGCCATCCGCGCGCT CGTCGAGGCGGAGGGCGA CGACC TCGACCTCGGCCTCGCCG TCTTCATCGAGGGGG CMS_1388 1458541 - 1459962 + | putative peptidase CMS_1389 1460098 - 1460460 + | putative DNA-binding protein TERM 450 1460504 - 1460541 + F 76 -18.5 -2.62263 | gap 1, opp_overlap 1460495 CGGAAACCCGGGCCT CG-GGCAGGGAGTCGTCC ATC GGGCGGCTCCCTGTCGCG TAATGTGGAACCCGT CMS_1390 1460546 - 1461496 + | putative cytochrome C oxidase subunit II CMS_1391 1461509 - 1463254 + | putative cytochrome C oxidase subunit I CMS_1392 1463256 - 1463672 + | putative integral membrane protein TERM 451 1463833 - 1463814 - g 79 -13.6 -3.61398 | CCTGCGCGCGAACAA GGACGTCG GCCG CGACGTCC TGCTCGTCGCAGAGG CMS_1393 1463677 - 1464114 + | putative acetyltransferase TERM 452 1464159 - 1464207 + F 73 -15.4 -3.18383 | gap 1, opp_overlap 1464159 GGGGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_1394 1464211 - 1465173 + | putative insertion element ISCmi2 transposase CMS_1395 1465967 - 1465170 - | hypothetical protein TERM 453 1465999 - 1465943 - G 95 -23.9 -3.14132 | gap 3, opp_overlap 1465958 1465967 CGCGGGGGCGACGAA GAC-CG-GCCTGCCGGCGGGTGCGCACG ACGA CGCGCGCACCCGCCGG-ATGCGCGCGTC GTCGTGGTTGGGCGG TERM 454 1465967 - 1466003 + r 100 -28.1 -2.71364 | opp_overlap 1465943, overlap 1465958 GCCGGCGGGTGCGCA CGACGACGCGCGCACCC GCC GGATGCGCGCGTCGTCG TGGTTGGGCGGCTAG CMS_1396 1466203 - 1466015 - | hypothetical protein CMS_1397 1466390 - 1467520 + | membrane efflux protein CMS_1398 1467603 - 1468181 + | TetR family transcriptional regulator TERM 455 1468523 - 1468559 + G 73 -15.7 -3.31144 | GACCGCGAAGGCCGC GGGCGAGGTCGACGGCG TCG CGACGGCGCTCTCGCCC TTCTCCGAGTACGCG CMS_1399 1468227 - 1471169 + | putative integral membrane protein CMS_1400 1471166 - 1473061 + | putative integral membrane protein CMS_1401 1473289 - 1474485 + | hypothetical protein CMS_1402 1474864 - 1474562 - | hypothetical protein CMS_1403 1475902 - 1475057 - | hypothetical protein CMS_1404 1476081 - 1476905 + | putative kinase CMS_1405 1477006 - 1478610 + | putative glycosyl transferase TERM 456 1478673 - 1478649 - g 75 -12.7 -3.61654 | opp_overlap 1478649 GACATCCAGGCCAAA GGAGGCCGCGG GTT CCCCGGCCGCC TGTTCGAGGCGCTCA TERM 457 1478980 - 1478950 - g 76 -17.6 -2.82015 | opp_overlap 1478978 TCGACACCGACGACA TCGAGCTCACCCTC GAC GAGGGCGAGCTCGC CCAGCGCGGCGTGCT CMS_1406 1478616 - 1479443 + | putative phosphatase mnhA 1479536 - 1482526 + | putative Na(+)/H(+) antiporter subunit CMS_1408 1482523 - 1483080 + | putative Na(+)/H(+) antiporter subunit CMS_1409 1483077 - 1484669 + | putative Na(+)/H(+) antiporter subunit CMS_1410 1484666 - 1485340 + | putative Na(+)/H(+) antiporter subunit CMS_1411 1485337 - 1485612 + | putative Na(+)/H(+) antiporter subunit CMS_1412 1485609 - 1486187 + | putative Na(+)/H(+) antiporter subunit ilvD 1486257 - 1487951 + | dihydroxy-acid dehydratase TERM 458 1488211 - 1488260 + G 83 -15.1 -3.64822 | gap 3 CCGCCACGAGCAGGG CGCCGGTCACG-CCGC-CGAGGGC TACGC GTCCTCGAGCGGACGC-ACCGGCG TTTGCATCGCGACCT ilvB 1487996 - 1489831 + | acetolactate synthase ilvH 1489828 - 1490337 + | acetolactate synthase small subunit ilvC 1490518 - 1491543 + | ketol-acid reductoisomerase CMS_1417 1491758 - 1492198 + | putative integral membrane protein CMS_1418 1492195 - 1492563 + | putative integral membrane protein CMS_1419 1492975 - 1492574 - | putative integral membrane protein serA 1493038 - 1494627 + | D-3-phosphoglycerate dehydrogenase CMS_1421 1495343 - 1494720 - | TetR family transcriptional regulator CMS_1422 1495464 - 1497005 + | putative efflux protein CMS_1423 1497333 - 1497043 - | hypothetical protein leuB 1497403 - 1498470 + | 3-isopropylmalate dehydrogenase ilvE 1498479 - 1499648 + | branched-chain amino acid aminotransferase TERM 459 1499649 - 1499701 + F 72 -16.8 -2.79183 | overlap 1499651 CGTCTCGACGCGTAG CGCGCGTCGGCCCGTGCCGGCGGC CGCGC GCCGCCGGCACGGCTAGGGTCGTG TCTCGTGAAGATCGC CMS_1426 1499706 - 1500479 + | putative hydrolase TERM 460 1500480 - 1500536 + F 73 -17.2 -2.62983 | gap 2 CGCGCCCGCGCCTGA CCGTGATCCGCACCGGCCGTGCGGCGCG CCT CGCGCTG-GCGGCCGCGGCGG-TCGCGC TGCTCTCGGGCTGCG CMS_1427 1500482 - 1501255 + | putative lipoprotein gltX 1501269 - 1502789 + | glutamyl-tRNA synthetase CMS_1429 1502827 - 1503747 + | putative pyridine nucleotide-disulfide oxidoreductase TERM 461 1503755 - 1503777 + T 72 -11.9 -3.61178 | overlap 1503752 GCATCTGAGGGGCGG CCGGCCCGC CGGGC GCGCGCCGG TTTGGCGTGGATCCG TERM 462 1503934 - 1503950 + T 83 -5.8 -4.63048 | gap 1, opp_overlap 1503934 1503935, overlap 1503935 AGCAAAAAATAAAAA G-CCCGG ATAT CCGGGTC TTTCTTATTTGTGAC TERM 463 1503949 - 1503934 - T 100 -6 -5.77571 | opp_overlap 1503934 1503935, overlap 1503935 AGCAAAAAATAAAAA GCCCGG ATAT CCGGGT CTTTCTTATTTGTGA TERM 464 1503948 - 1503935 - T 73 -9.5 -4.02882 | opp_overlap 1503935 1503934, overlap 1503934 GCAAAAAATAAAAAG CCCGG ATAT CCGGG TCTTTCTTATTTGTG TERM 465 1503935 - 1503948 + T 71 -9.5 -3.91443 | opp_overlap 1503934 1503935, overlap 1503934 GCAAAAAATAAAAAG CCCGG ATAT CCGGG TCTTTCTTATTTGTG CMS_1430 1504303 - 1503998 - | hypothetical protein CMS_1431 1504338 - 1505057 + | putative integral membrane protein TERM 466 1505067 - 1505112 + T 100 -37.1 -3.07043 | GGTTGAGGCGCCTCG TGACGACGGCCCCGCTCGAGC AGAT GCTCGAGCGGGGCCGTCGTCG TATTCAGGTGCTGCG CMS_1432 1506140 - 1505130 - | putative oxidoreductase CMS_1433 1506809 - 1506195 - | TetR family transcriptional regulator CMS_1434 1506865 - 1507662 + | putative short chain oxidoreductase CMS_1435 1508834 - 1507731 - | putative integral membrane protein CMS_1436 1509491 - 1509063 - | putative sortase-sorted membrane protein CMS_1437 1510169 - 1509519 - | hypothetical protein TERM 467 1510424 - 1510453 + H 100 -20.7 -4.08557 | opp_overlap 1510418 ACCAACGCATCACCA GCCCGGTCCCTCC TCGC GGAGGGCCCGGGC TTCTTCTTTCCCCGG CMS_1438 1510552 - 1511328 + | hypothetical protein ung 1511339 - 1512025 + | uracil DNA glycosylase CMS_1441 1514002 - 1512650 - | putative integral membrane protease CMS_1440 1512079 - 1512768 + | putative acetyltransferase protein (toxin resistance) CMS_1442 1514149 - 1515147 + | putative reductase hps 1515899 - 1515219 - | hexulose-6-phosphate synthase rmpB 1516507 - 1515896 - | 6-phospho-3-hexuloisomerase CMS_1445 1516555 - 1517937 + | LuxR family transcriptional regulator CMS_1446 1518103 - 1520190 + | putative secreted 5'-nucleotidase CMS_1447 1520219 - 1521730 + | putative amidase CMS_1448 1522469 - 1521756 - | putative integral membrane protein CMS_1449 1522625 - 1523566 + | putative siderophore-interacting protein CMS_1450 1523569 - 1523973 + | hypothetical protein CMS_1451 1524875 - 1523997 - | putative oxidoreductase CMS_1452 1525264 - 1524872 - | hypothetical protein CMS_1453 1526694 - 1525261 - | putative oxidoreductase TERM 468 1525679 - 1525723 + g 74 -17.9 -2.74012 | gap 2 TCGTCGACGGTGCCG CCGGTCGCGCG-CG-CGGCGA TGACC TCGCCGGCGGCGCGCGCCTGG TACTTGCCCTGGTGG CMS_1454 1527531 - 1526752 - | putative enoyl-CoA hydratase CMS_1455 1528504 - 1527662 - | putative arginase CMS_1456 1529164 - 1528595 - | putative oxidoreductase TERM 469 1529293 - 1529329 + r 83 -21.7 -2.63102 | gap 1 TCCCCGCGCGGACGA CGACGGGCGCCGC-TC CCGGAA GATGCGGCGCCCGTCG TGGTGTGCGGCTACT CMS_1457 1529993 - 1529340 - | hypothetical protein CMS_1458 1532243 - 1530192 - | putative integral membrane protein CMS_1459 1532742 - 1532332 - | hypothetical protein CMS_1460 1533113 - 1532871 - | hypothetical protein TERM 470 1533420 - 1533455 + r 93 -24.8 -2.52464 | overlap 1533425 CCCGTGTTGGTGCGG TGAGAGGCCGGTCCCG CCAG CGGGGCCGGCCTCTCG TGCGTTCGCCCACCG TERM 471 1533425 - 1533450 + r 83 -19.7 -2.82933 | overlap 1533420 GTTGGTGCGGTGAGA GGCCGGTCCCG CCAG CGGGGCCGGCC TCTCGTGCGTTCGCC CMS_1461 1533802 - 1533620 - | hypothetical protein TERM 472 1533731 - 1533752 + g 89 -10.2 -4.60041 | GTTAACTTGCTCGTT GAACGCCT CCGTGT AGGCGTTC TTTTTCACGGTGCCT CMS_1462 1534537 - 1533836 - | putative peptidoglycan associated protein TERM 473 1534565 - 1534540 - R 74 -8.3 -4.09685 | gap 1, opp_overlap 1534525 1534540 1534542 CTGCATTCGGCAAAA GT-GCCGCGTCA GTC TGATGCGGCTAC TTCATGCCCCACTCA CMS_1463 1535245 - 1534562 - | hypothetical protein TERM 474 1535471 - 1535429 - H 100 -25.7 -3.03441 | gap 1, overlap 1535431 GAGGACGCGTGAACA CACGCGGCGGG-GCCCGAGA CGGG TCTCGGGTTCCCGCCGCGTG GTGCTGGGCCCAACT TERM 475 1535469 - 1535431 - H 93 -22.5 -3.07344 | gap 1, overlap 1535429 GGACGCGTGAACACA CGCGGCGGG-GCCCGAGA CGGG TCTCGGGTTCCCGCCGCG TGGTGCTGGGCCCAA CMS_1464 1535711 - 1536403 + | putative oxidase TERM 476 1536982 - 1536932 - g 70 -17 -2.66435 | gap 3, overlap 1536929 ACGCCGAGGAGATCA CG-GCCGTCATGCGCGACCACGACG TGCG CGTCGCGGTCG-GCA-GTCGGCTCG CCCGCGCGCTCGGAT CMS_1465 1536481 - 1537251 + | putative aminopeptidase CMS_1466 1538053 - 1537298 - | putative short-chain oxidoreductase CMS_1467 1538817 - 1538050 - | putative short-chain oxidoreductase CMS_1468 1540211 - 1538814 - | major facilitator family transporter CMS_1469 1541136 - 1540246 - | putative deacetylase CMS_1470 1542187 - 1541162 - | putative L-asparaginase TERM 477 1543084 - 1543109 + G 77 -17.5 -3.01712 | GACCGAGGAGGTGCT GCGCGCCGGGC ACGC GCCCGACGCGC TCTTCGCGACCAACG CMS_1471 1542359 - 1543387 + | LacI family transcriptional regulator CMS_1472 1543450 - 1544244 + | hypothetical protein CMS_1473 1544898 - 1544254 - | hypothetical protein argS 1545094 - 1546758 + | arginyl-tRNA synthetase CMS_1475 1546770 - 1547600 + | hypothetical protein TERM 478 1548959 - 1548901 - g 70 -12.9 -3.37796 | gap 1 CGGCATGAGCGACAA CGCGCGCCCCGCCCTCTACG-GCGCCGA CTAC TCGGTGCGCATCGCGGGCCGGGCGTCCG ATGCGGATCCCGCGC lysA 1547759 - 1549258 + | diaminopimelate decarboxylase CMS_1477 1549255 - 1550586 + | homoserine dehydrogenase thrC 1550586 - 1551662 + | threonine synthase thrB 1551659 - 1552624 + | homoserine kinase TERM 479 1552648 - 1552687 + T 72 -14.2 -3.41002 | overlap 1552649 1552652 1552657 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 480 1552649 - 1552686 + T 73 -17.7 -2.63878 | overlap 1552648 1552652 1552657 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 481 1552652 - 1552683 + T 73 -18 -2.6072 | overlap 1552649 1552648 1552657 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 482 1552657 - 1552678 + T 71 -15.1 -3.10677 | overlap 1552652 1552649 1552648 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_1480 1553597 - 1552635 - | putative insertion element IS1121 transposase rho 1553994 - 1556543 + | putative transcription termination factor TERM 483 1557386 - 1557343 - g 72 -14.5 -3.31461 | gap 1, overlap 1557344 GAGCCAGCTGCAGAA CCGCGAGGCCG-GCATGCGC GTGCT GCGCGCGCGCGTCCTCGCGA AGCAGCAGGAGGAGA prfA 1556549 - 1557628 + | peptide chain release factor 1 CMS_1483 1557653 - 1558528 + | putative methylase CMS_1484 1559221 - 1558568 - | putative hydrolase CMS_1485 1559293 - 1560255 + | hypothetical protein CMS_1486 1560252 - 1561571 + | putative glycosyl transferase CMS_1487 1561568 - 1562038 + | putative integral membrane protein TERM 484 1563085 - 1563046 - g 72 -14.2 -3.41002 | overlap 1563047 1563050 1563055 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 485 1563084 - 1563047 - g 73 -17.7 -2.63878 | overlap 1563046 1563050 1563055 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 486 1563081 - 1563050 - g 73 -18 -2.6072 | overlap 1563047 1563046 1563055 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 487 1563076 - 1563055 - g 71 -15.1 -3.10677 | overlap 1563050 1563047 1563046 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_1488 1562136 - 1563098 + | putative insertion element IS1121 transposase CMS_1489 1563547 - 1563152 - | putative globin CMS_1490 1564890 - 1563547 - | putative mechanosensitive ion channel pepN 1567591 - 1565048 - | aminopeptidase N CMS_1492 1567744 - 1568370 + | hypothetical protein CMS_1493 1568484 - 1568972 + | putative sugar-phosphate isomerase CMS_1494 1568979 - 1569968 + | putative formamidopyrimidine-DNA glycosylase CMS_1495 1570572 - 1570087 - | hypothetical protein CMS_1496 1575658 - 1570715 - | large integral membrane protein TERM 488 1577614 - 1577557 - g 74 -17.7 -2.78463 | overlap 1577567 1577603 1577604 AGGCCCGCGACCAGA TCGTCGACAAGCTCCTCGAGGGCGTCG AGAT CCCCGTCCCCGAGAAGCTCGTCGAGGA CGAGGTGCAGCGCCA tig 1576698 - 1578140 + | putative cell division trigger factor TERM 489 1578353 - 1578367 + G 83 -7.8 -4.57569 | opp_overlap 1578353 CAATGGCCGAACCGA CACTGG TAC CCGGTG TTTTTGACCGACTGC clpP1 1578325 - 1578927 + | ATP dependent Clp protease proteolytic subunit 1 clpP2 1578963 - 1579643 + | ATP dependent Clp protease proteolytic subunit 2 TERM 490 1579657 - 1579690 + T 100 -25.4 -2.62184 | opp_overlap 1579660 AGGCCCGCACGGAGA GGAGGGGCGGTCGG CATCAA CCGACCGCCCCTCC TCGTCTGCCCGGACG TERM 491 1579687 - 1579660 - T 81 -20.6 -2.64616 | opp_overlap 1579657 CCCGCACGGAGAGGA GGGGCGGTCGGC ATCA ACCGACCGCCCC TCCTCGTCTGCCCGG CMS_1500 1580850 - 1579708 - | putative monooxygenase clpX 1581017 - 1582297 + | ATP dependent Clp protease ATP binding subunit TERM 492 1582325 - 1582362 + T 100 -28.5 -2.63596 | opp_overlap 1582330, overlap 1582330 ACCGCAGCCGCACGA CGAGAGCGCCGCACCCC GTGA GGGGCGCGGCGCTCTCG TCGTATGGCGTCCGG TERM 493 1582330 - 1582357 + T 83 -19.8 -2.84634 | opp_overlap 1582330, overlap 1582325 AGCCGCACGACGAGA GCGCCGCACCCC GTGA GGGGCGCGGCGC TCTCGTCGTATGGCG TERM 494 1582357 - 1582330 - T 87 -22 -2.82635 | opp_overlap 1582330 1582325 AGCCGCACGACGAGA GCGCCGCACCCC GTGA GGGGCGCGGCGC TCTCGTCGTATGGCG CMS_1502 1584442 - 1582379 - | putative oligopeptidase CMS_1503 1584482 - 1585285 + | hypothetical protein CMS_1504 1585630 - 1585367 - | hypothetical protein CMS_1505 1586082 - 1585630 - | putative acetyltransferase CMS_1506 1588724 - 1586079 - | class I tRNA synthetase (I, L, M and V) pckG 1590815 - 1588872 - | putative phosphoenolpyruvate carboxykinase TERM 495 1590382 - 1590420 + g 71 -10.1 -3.71848 | gap 1, opp_overlap 1590380, overlap 1590380 1590387 GATCCGGCGAAGAGG CCGTCGAG-CTCGGCGCG CGTC CGCGCCGGGTCGCGCCAG TTGTTCGTGGGGCCG CMS_1508 1590889 - 1592352 + | putative DNA-binding protein CMS_1509 1594035 - 1592371 - | putative nucleotide-binding ABC transporter subunit CMS_1510 1594892 - 1594032 - | putative ABC transporter integral membrane protein CMS_1511 1595965 - 1594889 - | putative ABC transporter integral membrane protein CMS_1512 1597608 - 1595962 - | putative ABC transporter substrate-binding protein CMS_1513 1597644 - 1598318 + | TetR family transcriptional regulator CMS_1514 1598326 - 1599108 + | hypothetical protein TERM 496 1599174 - 1599222 + F 73 -15.4 -3.18383 | gap 1, opp_overlap 1599174 TGAGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_1515 1599226 - 1600188 + | putative insertion element ISCmi2 transposase CMS_1516 1600707 - 1600201 - | hypothetical protein CMS_1517 1600797 - 1601306 + | hypothetical protein TERM 497 1602333 - 1602348 + G 74 -8.2 -4.14627 | CGAGATCGAGATGCG GCTGCC CATC GGCGGC TTCTTTGTGTGGGAC CMS_1519 1601992 - 1602738 + | putative oxidoreductase CMS_1520 1602785 - 1603336 + | hypothetical protein CMS_1521 1603454 - 1604452 + | hypothetical protein CMS_1522 1604531 - 1605823 + | DNA polymerase IV CMS_1523 1606108 - 1606335 + | hypothetical protein CMS_1524 1607696 - 1606383 - | putative nucleotide-sugar dehydrogenase CMS_1525 1609668 - 1607866 - | putative sugar synthase CMS_1526 1612016 - 1609665 - | putative sugar synthase CMS_1529 1614426 - 1614758 + | hypothetical protein CMS_1530 1615017 - 1615667 + | putative integral membrane protein CMS_1531 1615670 - 1617232 + | putative ABC transporter ATP-binding subunit CMS_1532 1617229 - 1618023 + | putative cobalt transport protein CMS_1533 1618013 - 1618561 + | putative ATP-binding protein CMS_1534 1618571 - 1618843 + | hypothetical protein CMS_1535 1619352 - 1619002 - | hypothetical protein CMS_1536 1620187 - 1619567 - | oligoribonuclease CMS_1537 1620244 - 1620459 + | putative integral membrane protein TERM 498 1620479 - 1620527 + F 74 -13.8 -3.49516 | overlap 1620482 1620485 1620501 1620506 CGGAGAGGGCCTGCC CGCGGCGGACGC-CGCGCCCGCCG GAT CGGAGGGCGTGCGCGT-CGTCATG TTCTCCTCTCCTCTT TERM 499 1620482 - 1620524 + F 70 -16.3 -2.58337 | overlap 1620479 1620485 1620501 1620506 AGAGGGCCTGCCCGC GGCGGACGC-CGCGCCCGCCG GAT CGGAGGGCGTGCGCGT-CGTC ATGTTCTCCTCTCCT CMS_1538 1620547 - 1620825 + | hypothetical protein nadE 1620953 - 1621774 + | NH(3)-dependent NAD(+)synthetase TERM 500 1621803 - 1621838 + T 100 -30.6 -2.65815 | GCCTGCCCGGCGCCT CGACGCCCCGCACCTC ATCG GAGGTGCGGGGCGTCG TCATGTGCCTGTGGG CMS_1540 1622568 - 1621861 - | hypothetical protein CMS_1541 1622888 - 1622652 - | hypothetical protein msrA 1623059 - 1623586 + | peptide methionine sulfoxide reductase CMS_1543 1623693 - 1623926 + | hypothetical protein CMS_1544 1624375 - 1624938 + | MarR family transcriptional regulator CMS_1545 1624935 - 1625414 + | putative lipoprotein CMS_1546 1625478 - 1627160 + | putative ABC transpoter ATP-binding protein CMS_1547 1627164 - 1627637 + | hypothetical protein tesB 1628552 - 1627647 - | acyl CoA thioesterase II CMS_1549 1628635 - 1629330 + | hypothetical protein TERM 501 1630377 - 1630338 - g 72 -14.2 -3.41002 | overlap 1630339 1630342 1630347 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 502 1630376 - 1630339 - g 73 -17.7 -2.63878 | overlap 1630338 1630342 1630347 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 503 1630373 - 1630342 - g 73 -18 -2.6072 | overlap 1630339 1630338 1630347 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 504 1630368 - 1630347 - g 71 -15.1 -3.10677 | overlap 1630342 1630339 1630338 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_1550 1629428 - 1630390 + | putative insertion element IS1121 transposase CMS_1551 1631095 - 1630535 - | putative haem-binding protein CMS_1552 1631800 - 1631261 - | hypothetical protein CMS_1553 1631852 - 1632577 + | hypothetical protein CMS_1554 1632574 - 1632792 + | hypothetical protein CMS_1555 1632885 - 1634111 + | putative tRNA-dihydrouridine synthase CMS_1556 1634116 - 1635375 + | putative deoxyguanosine triphosphate triphosphohydrolase TERM 505 1636178 - 1636161 - g 71 -3.4 -4.46212 | gap 1 CCGTCTACCACAAAA GCTCCGT GCTCT ACGG-GC TCGACCTCGCCAAGC dnaG 1635440 - 1637332 + | DNA primase TERM 506 1638005 - 1637959 - g 73 -15.2 -3.29461 | gap 2 CAACGGCGCCGACAA CGGCAACGG-CCCGTCG-TCGC TGCTC GCGAACGTCGAGTCCGTCGCCG CGCCGGACGACACCA CMS_1558 1637531 - 1639186 + | putative substrate-binding transport protein CMS_1559 1639333 - 1640427 + | putative integral membrane transport protein TERM 507 1641233 - 1641260 + G 77 -19.2 -2.78384 | gap 1, overlap 1641223 GGCTACGACCTCAAC CGCGCGCTCGCGG ACA CCGCGAGCG-GCG TCTGGTGGACGGGCG CMS_1560 1640429 - 1641403 + | putative integral membrane transport protein CMS_1561 1641400 - 1643112 + | putative ABC transporter ATP-binding subunit CMS_1562 1643226 - 1644161 + | putative ABC transporter ATP-binding subunit CMS_1563 1644272 - 1645177 + | putative dehydrogenase CMS_1564 1645241 - 1646272 + | hypothetical protein CMS_1565 1646681 - 1646292 - | hypothetical protein CMS_1566 1646794 - 1646982 + | hypothetical protein TERM 508 1647023 - 1646992 - f 88 -20.8 -3.14944 | overlap 1646961 CACTAGGAGAGGGAA GCCGACCGGCGCGC ACCC GCGCGCCGGCCGGG ACGACGTCCGCCCGC CMS_1567 1647083 - 1648033 + | hypothetical protein CMS_1568 1648030 - 1649649 + | putative hydrolase CMS_1569 1649646 - 1651022 + | hypothetical protein CMS_1570 1651019 - 1652437 + | hypothetical protein CMS_1571 1652611 - 1653639 + | putative integral membrane transport protein CMS_1572 1653636 - 1654430 + | putative ATP-binding ABC transport protein CMS_1573 1654427 - 1655437 + | putative substrate-binding transport protein CMS_1574 1655430 - 1656713 + | putative integral membrane transport protein TERM 509 1657760 - 1657721 - g 72 -14.2 -3.41002 | overlap 1657722 1657725 1657730 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 510 1657759 - 1657722 - g 73 -17.7 -2.63878 | overlap 1657721 1657725 1657730 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 511 1657756 - 1657725 - g 73 -18 -2.6072 | overlap 1657722 1657721 1657730 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 512 1657751 - 1657730 - g 71 -15.1 -3.10677 | overlap 1657725 1657722 1657721 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_1575 1656811 - 1657773 + | putative insertion element IS1121 transposase TERM 513 1657918 - 1657943 + T 100 -15.4 -4.54727 | opp_overlap 1657918 AACTCGGGGAGCGAA GGCCTCGCGG CTCCAC CCGCGGGGCC TTTTACTTTGCCCGG def 1658585 - 1658019 - | peptide deformylase CMS_1577 1658625 - 1659536 + | putative integral membrane protein CMS_1578 1659705 - 1660964 + | putative glycosyl transferase TERM 514 1661450 - 1661472 + G 80 -3.2 -4.74215 | overlap 1661444 1661468 GCTCGCCTGGCCGTC CGGCGGCTTC CTC GGCGTCGACG TTTTCTTCGTGATCT TERM 515 1661654 - 1661684 + G 71 -8.3 -3.99374 | gap 2, overlap 1661660 CCTCTCCGGCCGCGC CTCGGCGATCGCGTG GGA CA-GCG-TCGCCGCG TTCTTCTTCGTCGCC TERM 516 1662461 - 1662446 - g 72 -11.8 -3.62597 | CGCACGCCGGAAGAA GCGGCG CGCG CGCCGC CGCCCGGGGTTGGGC CMS_1579 1661058 - 1663493 + | putative acyltransferase fcl 1664603 - 1663599 - | GDP-l-fucose synthetase gmd 1665652 - 1664600 - | GDP-mannose 4,6-dehydratase wcaI 1665823 - 1667109 + | putative surface polysaccharide biosynthesis glycosyl transferase wcaF 1667106 - 1667687 + | putative surface polysaccharide biosynthesis acetyl transferase CMS_1584 1667684 - 1668808 + | putative glycosyl transferase TERM 517 1670294 - 1670281 - g 70 -2.3 -4.4009 | opp_overlap 1670287 1670288, overlap 1670282 1670283 1670285 CGGGACGCGATAAAA CCGAC AGCG GCCAG CGGGTCGGGTACCCG rfc 1668805 - 1670325 + | putative polysaccharide polymerase CMS_1586 1671215 - 1670820 - | hypothetical protein CMS_1587 1672150 - 1671212 - | hypothetical protein CMS_1588 1673274 - 1672174 - | putative glycosyl transferase wzx 1674536 - 1673337 - | putative surface polysaccharide flippase CMS_1590 1676221 - 1674632 - | putative initial glycosyl transferase CMS_1591 1676630 - 1676343 - | hypothetical protein TERM 518 1676705 - 1676666 - R 88 -18.6 -3.53224 | opp_overlap 1676673, overlap 1676667 1676670 GAGGCGCGCCTTAAA TGGAGAACGGCCCCGACC ACAT GGTCGGAGCCGTTCTCGG AAGCTCAGCGTGCTG TERM 519 1676704 - 1676667 - R 87 -22.1 -2.71791 | opp_overlap 1676673, overlap 1676666 1676670 AGGCGCGCCTTAAAT GGAGAACGGCCCCGACC ACAT GGTCGGAGCCGTTCTCG GAAGCTCAGCGTGCT TERM 520 1676701 - 1676670 - R 86 -22.4 -2.64155 | opp_overlap 1676673, overlap 1676667 1676666 CGCGCCTTAAATGGA GAACGGCCCCGACC ACAT GGTCGGAGCCGTTC TCGGAAGCTCAGCGT TERM 521 1676673 - 1676698 + r 77 -16.1 -3.29511 | opp_overlap 1676670 1676667 1676666 GCCTTAAATGGAGAA CGGCCCCGACC ACAT GGTCGGAGCCG TTCTCGGAAGCTCAG csp 1676950 - 1676747 - | cold shock protein TERM 522 1677008 - 1676971 - H 76 -4.7 -4.57073 | gap 1, overlap 1676973 1676976 TATTTCCTTCAAAAA GAGATGCATCGATCCCGG GAC CCGGGACCG-CGGGTCGC CTACCCTCGTGACCC TERM 523 1678575 - 1678521 - g 72 -16.3 -2.79183 | gap 2 TCGACGTGCAGCAGA TCGGCCGCGCGGGCG-AGGCGTC-CCC GTC GGACGCCGCCCGCGCCCGCACGTCCGC CCGCGACCAGGGCCG polA 1677101 - 1678879 + | putative DNA polymerase I TERM 524 1678928 - 1678897 - f 93 -25.2 -2.62184 | opp_overlap 1678894 1678921, overlap 1678880 CGCGCCCGGACATGA CGACGCCCGGCCCC TCAG GGGACCGGGCGTCG CGGTGTCATGGGGGA CMS_1594 1678931 - 1679122 + | hypothetical protein CMS_1595 1679230 - 1680093 + | hypothetical protein CMS_1596 1680697 - 1680095 - | PadR family transcriptional regulator CMS_1598 1681000 - 1681479 + | hypothetical protein kasA 1682814 - 1681573 - | 3-oxoacyl-[acyl-carrier-protein] synthase I acpP 1683142 - 1682894 - | acyl carrier protein fabH 1684170 - 1683196 - | 3-oxoacyl-[acyl-carrier-protein] synthase III fabD 1685160 - 1684240 - | malonyl CoA-acyl carrier protein transacylase CMS_1603 1686529 - 1685255 - | hypothetical protein aceE 1689317 - 1686546 - | pyruvate dehydrogenase E1 component CMS_1605 1689443 - 1689985 + | hypothetical protein CMS_1606 1690699 - 1690010 - | hypothetical protein tetR 1691603 - 1690917 - | putative tetracycline repressor protein bioY 1691680 - 1692243 + | putative biotin synthase CMS_1609 1692240 - 1692941 + | putative ABC transporter ATP-binding subunit CMS_1610 1692938 - 1693549 + | putative integral membrane protein CMS_1611 1693635 - 1693826 + | hypothetical protein CMS_1612 1693879 - 1694706 + | hypothetical protein CMS_1613 1694762 - 1695529 + | hypothetical protein ppgK 1696854 - 1696033 - | polyphosphate glucokinase CMS_1615 1696929 - 1697111 + | hypothetical protein panB 1697990 - 1697121 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase glnA2 1698076 - 1699413 + | glutamine synthetase 2 glnE 1699472 - 1702492 + | glutamate-ammonia-ligase adenylyltransferase glnA 1704005 - 1702581 - | glutamine synthetase I CMS_1620 1704199 - 1704627 + | putative integral membrane protein CMS_1621 1705118 - 1704654 - | hypothetical protein CMS_1622 1706089 - 1705436 - | putative integral membrane protein CMS_1623 1706525 - 1708081 + | putative membrane-spanning protein sucB 1709555 - 1708107 - | dihydrolipoamide succinyltransferase pdhD 1710989 - 1709616 - | dihydrolipoamide dehydrogenase TERM 525 1711107 - 1711097 - R 76 -4.6 -4.57073 | overlap 1711098 1711099 TACGCGCGTGAAAAA CCGG CGG CCAG GGCCAGGAGCGTGCG pepA 1712544 - 1711081 - | putative aminopeptidase CMS_1627 1712826 - 1713638 + | hypothetical protein CMS_1628 1713714 - 1715036 + | putative integral membrane transport protein TERM 526 1715470 - 1715414 - f 71 -15 -3.14931 | gap 1, overlap 1715416 1715444 GGCACCCGCGACCAA GACCGCCGCTGCCGCCAAGGCCCCCAC GAAG GCGGCGGCCGCGAAGGCAGCAGCAG-C AGAGGCCGACGAGCC TERM 527 1715469 - 1715416 - f 82 -18.7 -3.1372 | overlap 1715414 1715444 CACCCGCGACCAAGA CCGCCGCTGCCGCCAAGGCCCCCAC GAAG GCGGCGGCCGCGAAGGCAGCAGCAG CAGAGGCCGACGAGC CMS_1629 1715664 - 1716731 + | putative RNA polymerase sigma factor CMS_1630 1716735 - 1718051 + | putative ligase CMS_1631 1718048 - 1718782 + | putative amidotransferase TERM 528 1718831 - 1718856 + T 89 -20.5 -3.21099 | opp_overlap 1718831 CCCAGGTACGACGAA GGGCGCATCCC CGCG GGGATGCGCCC TTCGTCGTGCGACGG TERM 529 1718856 - 1718831 - T 89 -20.5 -3.22298 | opp_overlap 1718831 CCCAGGTACGACGAA GGGCGCATCCC CGCG GGGATGCGCCC TTCGTCGTGCGACGG CMS_1632 1719120 - 1718893 - | hypothetical protein gyrB 1719335 - 1721413 + | putative DNA gyrase subunit B gyrA 1724041 - 1721495 - | DNA gyrase subunit A CMS_1635 1724127 - 1725266 + | hypothetical protein CMS_1636 1726521 - 1725322 - | putative DNA-binding protein CMS_1637 1726776 - 1727132 + | hypothetical protein TERM 530 1727156 - 1727195 + T 72 -14.2 -3.41002 | overlap 1727157 1727160 1727165 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 531 1727157 - 1727194 + T 73 -17.7 -2.63878 | overlap 1727156 1727160 1727165 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 532 1727160 - 1727191 + T 73 -18 -2.6072 | overlap 1727157 1727156 1727165 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 533 1727165 - 1727186 + T 71 -15.1 -3.10677 | overlap 1727160 1727157 1727156 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_1638 1728105 - 1727143 - | putative insertion element IS1121 transposase TERM 534 1728276 - 1728309 + r 82 -19.7 -2.71731 | GCCTCACCGCACGTC ATGATCGCCGCGATC CCCG GATCGCGGCGATCAG TCGTTCCGGGGTGCG CMS_1639 1728723 - 1728274 - | hypothetical protein dut 1728762 - 1729232 + | deoxyuridine 5'-triphosphate nucleotidohydrolase (dutpase) (dUTP pyrophosphatase) CMS_1641 1729229 - 1729921 + | hypothetical protein CMS_1642 1729924 - 1730730 + | putative integral membrane protein acnA 1730910 - 1733774 + | aconitase TERM 535 1733820 - 1733781 - f 86 -19.2 -3.36273 | opp_overlap 1733787 GTCGCGTAACAGGAA CCTGAAGGGGGCCGGGCG GCGA CGCCCGGCCTCCTTCCTG CGTGCGGCCCCTGCG TERM 536 1733787 - 1733814 + F 95 -22 -3.18264 | opp_overlap 1733781 TAACAGGAACCTGAA GGGGGCCGGGCG GCGA CGCCCGGCCTCC TTCCTGCGTGCGGCC dxs 1733890 - 1735842 + | 1-deoxy-d-xylulose-5-phosphate synthase TERM 537 1735859 - 1735889 + T 89 -24 -2.53263 | CGCCTGTCGCACGCA GCAGGGCCCGGCCG ATG CGGCCTGGCCCTGC TGCGTTCCCCCTGGC fadB 1738035 - 1735906 - | fatty acid oxidation complex alpha-subunit fadA 1739213 - 1738032 - | 3-ketoacyl-CoA thiolase TERM 538 1738460 - 1738497 + g 70 -16.2 -2.70932 | GGCCGAGCTCCTTGA CGGCGTCGCCGCTGGC GAGCAG GGCGGCGGTGGCGCCG TCGTTGAGACCCGAC CMS_1647 1740644 - 1739313 - | putative ribonuclease TERM 539 1740545 - 1740585 + g 70 -13.1 -3.36327 | GCGGACGGGAGGGTG CGTCGTCGTCGCGCGGGAC CGG GTCCGCCGCGGCGGGGGCG TTCTCGGTCGCCTGC CMS_1648 1741291 - 1740785 - | hypothetical protein CMS_1649 1742218 - 1741472 - | putative hydrolase CMS_1650 1742655 - 1742215 - | hypothetical protein thtR 1743563 - 1742652 - | putative thiosulfate sulfurtransferase CMS_1652 1743732 - 1744796 + | putative ATPase CMS_1653 1745048 - 1746334 + | putative ammonium transporter CMS_1654 1746528 - 1747367 + | putative aldo/keto reductase CMS_1656 1748035 - 1748859 + | HemK family methyltransferase TERM 540 1750164 - 1750125 - g 72 -14.2 -3.41002 | overlap 1750126 1750129 1750134 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 541 1750163 - 1750126 - g 73 -17.7 -2.63878 | overlap 1750125 1750129 1750134 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 542 1750160 - 1750129 - g 73 -18 -2.6072 | overlap 1750126 1750125 1750134 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 543 1750155 - 1750134 - g 71 -15.1 -3.10677 | overlap 1750129 1750126 1750125 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_1658 1749215 - 1750177 + | putative insertion element IS1121 transposase CMS_1659 1750224 - 1750727 + | hypothetical protein CMS_1660 1751721 - 1750714 - | putative substrate binding transport protein CMS_1661 1752398 - 1751724 - | putative ATP-binding integral membrane transport protein CMS_1662 1753639 - 1752485 - | putative ABC transporter ATP-binding protein TERM 544 1752722 - 1752752 + g 82 -19.8 -2.72344 | opp_overlap 1752736, overlap 1752700 GACGAGCGCGGCGCC CGCGCTCGAGACGA GCA TCGTGTCGAGCGCG TCGTTGAGGGTCGCG CMS_1663 1754408 - 1753767 - | putative integral membrane transport protein CMS_1664 1754660 - 1756000 + | hypothetical protein CMS_1665 1757005 - 1756040 - | putative oxidoreductase CMS_1666 1758066 - 1757050 - | putative metal ion transport protein TERM 545 1758149 - 1758188 + H 73 -16.4 -2.98823 | opp_overlap 1758152, overlap 1758152 1758154 GGAGCAGGGAACGAG GAAGAGCCGGCCGGATCC TCGT GGATCCGACCGGCTCTCG TGTGTGTCCGAAGGG TERM 546 1758152 - 1758185 + H 87 -22.5 -2.72799 | opp_overlap 1758152, overlap 1758149 1758154 GCAGGGAACGAGGAA GAGCCGGCCGGATCC TCGT GGATCCGACCGGCTC TCGTGTGTGTCCGAA TERM 547 1758185 - 1758152 - H 100 -24.7 -3.2827 | opp_overlap 1758149 1758152 1758154 GCAGGGAACGAGGAA GAGCCGGCCGGATCC TCGT GGATCCGACCGGCTC TCGTGTGTGTCCGAA TERM 548 1758154 - 1758183 + H 79 -19.3 -2.90797 | opp_overlap 1758152, overlap 1758152 1758149 AGGGAACGAGGAAGA GCCGGCCGGATCC TCGT GGATCCGACCGGC TCTCGTGTGTGTCCG CMS_1667 1758392 - 1759702 + | putative peptidase CMS_1668 1759844 - 1760563 + | putative undecaprenyl-diphosphatase cysS 1760628 - 1761857 + | putative cysteinyl-tRNA synthetase CMS_1670 1762911 - 1761952 - | hypothetical protein CMS_1671 1763004 - 1763702 + | putative hydrolase TERM 549 1764355 - 1764389 + G 77 -17.8 -3.01712 | CACCGTCACGCAGCT GTCGCGCGTCGCGGAG GCG CTCCGCGACTCGGGGC TCTTCACGAACCCCG CMS_1672 1763699 - 1764763 + | putative methyltransferase CMS_1673 1764825 - 1765868 + | putative exported ATP-binding protein CMS_1674 1765893 - 1766924 + | hypothetical protein CMS_1675 1766921 - 1767910 + | putative DNA-binding protein tatA 1768101 - 1768466 + | Sec-independent protein translocase protein TatA tatC 1768521 - 1769273 + | Sec-independent protein translocase protein TatC CMS_1678 1769368 - 1771839 + | putative helicase lnt 1771836 - 1773431 + | apolipoprotein N-acyltransferase TERM 550 1773458 - 1773498 + T 82 -19.7 -2.70932 | opp_overlap 1773463, overlap 1773460 GTCACCTCCGCGACA CAGAAGAGCACCCCTCGGC GGT GCCGAGGGGTGCTCAGATG TCCTTCGCGAGCGGA TERM 551 1773460 - 1773496 + T 72 -16.5 -2.90075 | opp_overlap 1773463, overlap 1773458 CACCTCCGCGACACA GAAGAGCACCCCTCGGC GGT GCCGAGGGGTGCTCAGA TGTCCTTCGCGAGCG TERM 552 1773493 - 1773463 - T 100 -27 -3.58726 | opp_overlap 1773460 1773458 CTCCGCGACACAGAA GAGCACCCCTCGGC GGT GCCGAGGGGTGCTC AGATGTCCTTCGCGA CMS_1680 1773873 - 1773523 - | hypothetical protein CMS_1681 1774737 - 1773949 - | putative phosphodiesterase CMS_1682 1775051 - 1774734 - | hypothetical protein CMS_1683 1775227 - 1776006 + | putative oxidoreductase CMS_1684 1776142 - 1778133 + | putative peptidase CMS_1685 1778130 - 1778600 + | hypothetical protein CMS_1686 1778672 - 1779307 + | hypothetical protein lip 1779365 - 1780252 + | putative exported lipase TERM 553 1780279 - 1780320 + F 84 -21 -2.87211 | gap 1, opp_overlap 1780287 CTCCCCGCATCACGC TGAC-ACGACGGCGGCCGG CTCGA CCGGCCGTCGTCGTCGTCG TATGTCGACGACCAT CMS_1688 1780435 - 1780929 + | hypothetical protein CMS_1689 1781348 - 1781079 - | hypothetical protein CMS_1690 1781456 - 1782493 + | LacI family transcriptional regulator CMS_1691 1784161 - 1782515 - | putative xylosidase/arabinosidase CMS_1692 1784339 - 1785634 + | putative substrate-binding transport CMS_1696 1790148 - 1790474 + | hypothetical protein TERM 554 1793856 - 1793908 + T 100 -28.7 -3.08798 | gap 3, overlap 1793857 CGGTGTGACGCCCTC CGG-GCATGACGACGGGCTCGCCGCG ATCT CGCGGCGAGCCCGTCGTC--GCACCG TCTTCGGTGCCCGGT TERM 555 1793857 - 1793910 + T 93 -21.8 -3.05816 | gap 2, overlap 1793856 GGTGTGACGCCCTCC G--GGCATGACGACGGGCTCGCCGCG ATCT CGCGGCGAGCCCGTCGTCGCACCGTC TTCGGTGCCCGGTCG CMS_1701 1796191 - 1793927 - | putative glycosyl hydrolase TERM 556 1796394 - 1796336 - H 82 -19.6 -2.75064 | overlap 1796333 1796390 CGCCCTACTGAACCA CGGGCGTTGGCGCGCGTCAACGACAAAT GAC ATCGGCAGTTGACACGCGACAACGCACG GCGTACCGTCCCCTC CMS_1702 1796470 - 1797810 + | putative integral membrane transport protein CMS_1703 1797810 - 1800548 + | putative glycosyl hydrolase CMS_1704 1800641 - 1801621 + | LacI family transcriptional regulator TERM 557 1801746 - 1801765 + G 72 -12.2 -3.58522 | GCCGTCGCGCATGTG GCGTTGAC ACGC GTCAACGC TTTGCGCATAATGAT TERM 558 1802800 - 1802756 - g 85 -17.2 -3.44527 | gap 2 CATCCACCACGACAA CGG-GATCCTGGGCG-CGGCGA CCT TCGCCGACGCCGAGGAGCGCCG CGTGGTGCTCCTCAA TERM 559 1803930 - 1803956 + G 74 -13.7 -3.53224 | gap 1 TTCGAGCTGCCGTAC CGCCGCGGCACG TTGA CG-GCCGTGGCG TTTACCGGCGGCGTG CMS_1705 1801743 - 1804370 + | putative glycosyl hydrolase CMS_1707 1805591 - 1805274 - | putative integral membrane efflux protein CMS_1708 1805932 - 1805591 - | putative integral membrane efflux protein TERM 560 1805685 - 1805644 - G 93 -24.6 -2.64616 | GCTCGATGCAGAGCA CCCCGCTCATGATCACCG CGATGC CGGCGACCATGAGCGGGG TCAGCGGCTCGCGGA CMS_1709 1806468 - 1805941 - | TetR family transcriptional regulator TERM 561 1807560 - 1807530 - g 81 -19.8 -2.62184 | overlap 1807559 GCGGGTGCGACACGA GGTCCTCGCCATCG ATG CGACGGCGAAGACC GTGACCGTGCGCGAC CMS_1711 1807294 - 1808952 + | putative pyridine nucleotide-disulphide oxidoreductase (putative NADH oxidase) CMS_1712 1808968 - 1809267 + | hypothetical protein CMS_1713 1809264 - 1809563 + | hypothetical protein CMS_1718 1811771 - 1810902 - | hypothetical protein TERM 562 1812135 - 1812174 + r 72 -14.2 -3.41002 | overlap 1812136 1812139 1812144 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 563 1812136 - 1812173 + r 73 -17.7 -2.63878 | overlap 1812135 1812139 1812144 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 564 1812139 - 1812170 + r 73 -18 -2.6072 | overlap 1812136 1812135 1812144 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 565 1812144 - 1812165 + r 71 -15.1 -3.10677 | overlap 1812139 1812136 1812135 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_1720 1813084 - 1812122 - | putative insertion element IS1121 transposase CMS_1721 1813195 - 1813626 + | hypothetical protein glyQS 1815070 - 1813685 - | glycyl-tRNA synthetase CMS_1723 1816216 - 1815182 - | putative oxidoreductase uppS 1817167 - 1816301 - | undecaprenyl phosphate synthetase recO 1818093 - 1817164 - | DNA repair protein RecO CMS_1726 1818212 - 1818889 + | putative integral membrane protein leuA 1820765 - 1818999 - | 2-ispoprylmalate synthase CMS_1728 1823496 - 1820932 - | putative integral membrane protein CMS_1729 1824896 - 1823493 - | hypothetical protein CMS_1730 1825663 - 1824977 - | putative two component system response regulator CMS_1731 1827216 - 1825714 - | putative two component sensor kinase CMS_1732 1828406 - 1827327 - | Era-like GTP-binding protein CMS_1733 1829721 - 1828399 - | putative integral membrane protein CMS_1734 1830192 - 1829731 - | hypothetical protein CMS_1735 1831238 - 1830189 - | PhoH-like protein CMS_1736 1831581 - 1831225 - | putative Hit-family protein CMS_1737 1832311 - 1831610 - | hypothetical protein CMS_1738 1833492 - 1832377 - | DnaJ chaperone protein CMS_1740 1834763 - 1835158 + | hypothetical protein CMS_1741 1835181 - 1835582 + | hypothetical protein hemN 1836820 - 1835597 - | putative oxygen-independent coproporphyrinogen III oxidase TERM 566 1835846 - 1835879 + g 74 -18.2 -2.75481 | gap 1 CGCGCCGGGTGAGGC CCCGGCGAGCACGCG GTCGG CGTGTGC-CGCCGGG TGCTTGACGTTCCAC CMS_1743 1836903 - 1837604 + | putative hydrolase CMS_1744 1838207 - 1837626 - | hypothetical protein CMS_1745 1838694 - 1839467 + | hypothetical protein CMS_1746 1839524 - 1840330 + | hypothetical protein CMS_1747 1840400 - 1841176 + | hypothetical protein CMS_1748 1841277 - 1842104 + | hypothetical protein TERM 567 1842161 - 1842120 - T 87 -20.1 -3.05384 | opp_overlap 1842127 TCGTCCGTCACTGAA CGCGGAAGCGCCCCCTGCC GAGA GGCAGGGGGCGCTTCGTCC ATGCGGCGGACGGCT TERM 568 1842127 - 1842154 + T 100 -24.2 -3.18264 | opp_overlap 1842120 TCACTGAACGCGGAA GCGCCCCCTGCC GAGA GGCAGGGGGCGC TTCGTCCATGCGGCG lepA 1844022 - 1842175 - | GTP-binding protein LepA TERM 569 1842829 - 1842841 + g 71 -9.1 -3.8512 | CTCGCTCGGGTTCGT GACCG TGA CGGTC TTCTTGTCCTCGCTG CMS_1750 1844745 - 1844122 - | hypothetical protein CMS_1751 1845520 - 1844909 - | putative sigma factor CMS_1752 1846543 - 1845566 - | putative DNA-binding protein CMS_1753 1847799 - 1846540 - | hypothetical protein CMS_1754 1847833 - 1848399 + | putative NUDIX hydrolase rpsT 1848535 - 1848798 + | 30s ribosomal protein S20 CMS_1756 1849939 - 1848911 - | putative DNA-binding protein CMS_1758 1852868 - 1851801 - | putative DNA-binding/transport protein CMS_1759 1854088 - 1853039 - | hypothetical protein leuS 1857006 - 1854448 - | leucyl-tRNA synthetase trpE 1858574 - 1857105 - | anthranilate synthase component I CMS_1762 1858733 - 1859446 + | hypothetical protein CMS_1763 1861148 - 1859478 - | putative ABC transporter ATP-binding subunit CMS_1764 1862890 - 1861145 - | putative ABC transporter ATP-binding subunit TERM 570 1862925 - 1862964 + r 72 -14.2 -3.41002 | overlap 1862926 1862929 1862934 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 571 1862926 - 1862963 + r 73 -17.7 -2.63878 | overlap 1862925 1862929 1862934 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 572 1862929 - 1862960 + r 73 -18 -2.6072 | overlap 1862926 1862925 1862934 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 573 1862934 - 1862955 + r 71 -15.1 -3.10677 | overlap 1862929 1862926 1862925 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_1765 1863875 - 1862912 - | putative insertion element IS1121 transposase cydB 1864977 - 1863973 - | cytochrome D ubiquinol oxidase subunit II cydA 1866389 - 1864977 - | cytochrome D ubiquinol oxidase subunit I CMS_1768 1866769 - 1867209 + | hypothetical protein CMS_1769 1868098 - 1867514 - | putative acetyltransferase CMS_1770 1868102 - 1868572 + | putative acetyltransferase CMS_1771 1868569 - 1869414 + | putative integral membrane transferase CMS_1772 1870597 - 1869407 - | putative oxygenase CMS_1772A 1871316 - 1870597 - | hypothetical protein CMS_1773 1872503 - 1871316 - | putative chalcone synthase CMS_1774 1873051 - 1872533 - | hypothetical protein TERM 574 1872877 - 1872897 + g 72 -13.9 -3.32946 | overlap 1872875 GCGCGCCCTGGCCCT CGGGCGCCG ACT CGGCGACCG TCTTGTGCTTGCGGA CMS_1774A 1874052 - 1873126 - | putative secreted substrate-binding transport protein CMS_1774B 1874792 - 1874067 - | putative integral membrane transport protein TERM 575 1874627 - 1874601 - G 70 -13.6 -3.28924 | overlap 1874602 GAGGCCGTCCGAGAA CGCCACGGCCAC GTT GCGGCCGCGGCC GGTGTGCCCGATGTA TERM 576 1874626 - 1874602 - G 70 -17.1 -2.57211 | overlap 1874601 AGGCCGTCCGAGAAC GCCACGGCCAC GTT GCGGCCGCGGC CGGTGTGCCCGATGT CMS_1775 1875487 - 1874789 - | putative integral membrane transport protein CMS_1776 1876389 - 1875484 - | putative ABC transporter ATP-binding subunit CMS_1777 1876573 - 1877313 + | hypothetical protein TERM 577 1877398 - 1877376 - f 71 -9.8 -3.9461 | overlap 1877379 CTCCTCGAAGAAGAA GAAGCACGCG ACC CGCACGCTCC TCGAGTCACCGGCCG TERM 578 1877395 - 1877379 - f 74 -7.9 -4.09963 | overlap 1877376 CTCGAAGAAGAAGAA GCACGCG ACC CGCACGC TCCTCGAGTCACCGG CMS_1778 1877422 - 1878450 + | hypothetical protein TERM 579 1878476 - 1878500 + T 95 -22.9 -3.23216 | opp_overlap 1878476 GACCGGCACGACGAA GGGCCCCGCGA TCA TCGCGGGGCCC TTCGTCGTCGTGCAG TERM 580 1878500 - 1878476 - T 95 -22.9 -3.21416 | opp_overlap 1878476 GACCGGCACGACGAA GGGCCCCGCGA TCA TCGCGGGGCCC TTCGTCGTCGTGCAG CMS_1779 1879387 - 1878521 - | putative oxidoreductase TERM 581 1879231 - 1879208 - G 79 -13.8 -3.61398 | GGCGGTGTCGAAGAA CGTGACGCCG AGCT CGGCGGCACG GCGGATGACGCGGAC CMS_1780 1879642 - 1879965 + | hypothetical protein CMS_1781 1880147 - 1880845 + | putative integral membrane transport protein CMS_1782 1882220 - 1880895 - | putative transcriptional regulator CMS_1783 1883035 - 1882271 - | putative hydrolase zwf 1884501 - 1883134 - | glucose-6-phosphate 1-dehydrogenase TERM 582 1884079 - 1884097 + g 70 -14.6 -3.28712 | CTGCGCGGCCGTGCG GCCGTTCG ACC CGAACGGC TTCTCGAGCGCGAGC CMS_1786 1888095 - 1889138 + | putative integral membrane protein CMS_1787 1889135 - 1890067 + | putative hydrolase CMS_1788 1890208 - 1891230 + | putative hydrolase TERM 583 1891288 - 1891251 - f 93 -24.2 -2.70932 | GCCGCCCGGGAACGA CGACGCCCCCGGTCCC TGAGAC GGGAGCGGGGGCGTCG CATCCGCGTGACGCG CMS_1790 1892057 - 1893034 + | putative alcohol dehydrogenase CMS_1791 1893993 - 1893031 - | putative insertion element ISCmi2 transposase TERM 584 1894045 - 1893997 - R 73 -15.4 -3.18383 | gap 1, opp_overlap 1893997 AGCGTGAGTCACGAA GACCTCCGGTGATGACGTGTGCT TGGT AACTCACATCGTC-CCGGAGGTC TTCGCTATCCGCCCC CMS_1792 1895511 - 1894090 - | putative integral membrane efflux protein CMS_1793 1896316 - 1895582 - | hypothetical protein CMS_1794 1897313 - 1896384 - | putative hydrolase hisC 1897398 - 1898531 + | histidinol-phosphate aminotransferase CMS_1796 1899498 - 1898569 - | putative oxidoreductase CMS_1797 1902080 - 1899495 - | putative helicase CMS_1798 1902123 - 1902386 + | hypothetical protein CMS_1799 1902457 - 1904043 + | putative oxidoreductase TERM 585 1904105 - 1904066 - T 100 -28 -2.62396 | gap 1, overlap 1904071 CATCCGCTGACACGA CGAGAGGCCCGGAC-CCGC ATC GCGGTGTCCGGGCCCCTCG TCGCGGGGGCGGCTA TERM 586 1904100 - 1904071 - T 84 -21.5 -2.84634 | gap 1, overlap 1904066 GCTGACACGACGAGA GGCCCGGAC-CCGC ATC GCGGTGTCCGGGCC CCTCGTCGCGGGGGC ptsH 1904390 - 1904118 - | phosphocarrier protein Hpr fruA 1906484 - 1904436 - | PTS system fructose-specific EIIBC component CMS_1802 1907478 - 1906507 - | putative 1-phosphofructokinase CMS_1803 1908206 - 1907475 - | DeoR family transcriptional regulator CMS_1804 1909427 - 1908399 - | putative secreted hydrolase TERM 587 1908615 - 1908588 - G 71 -15.5 -3.14132 | CTCCTGGTCCACGAA CCGGGCGCCCG CGTCGC CGGCCGCCCGG GCGATCGCGGCGTCG CMS_1805 1909844 - 1909470 - | putative integral membrane protein TERM 588 1909897 - 1909855 - H 83 -19.8 -2.80994 | opp_overlap 1909854 1909852 TCCAAGTGGAGGACA GTCCCCCGATCGGGGAGCGG ATC CCGCGCGCCGATCGGACGAC GTGGTTCCGTGGGGC CMS_1806 1909898 - 1910836 + | putative integral membrane protein TERM 589 1910931 - 1910902 - T 74 -17.1 -3.07962 | overlap 1910887 CCGGAGACGGGAAGA GCCCCGCGCCTCC GTGA GGAGGAGCGAGGC TCGAGGGTGGATCTG CMS_1807 1911507 - 1911112 - | hypothetical protein CMS_1808 1911967 - 1911590 - | hypothetical protein CMS_1809 1913551 - 1912007 - | putative membrane anchored protein nadD 1914150 - 1913548 - | nicotinate-nucleotide adenylyltransferase TERM 590 1914066 - 1914082 + g 72 -13.7 -3.36327 | opp_overlap 1914025 GCTGCACCTCGCTCG CGGCCAC GAG GTGGCCG TTGTGGATGGGGTCG CMS_1811 1914383 - 1914168 - | hypothetical protein proA 1915843 - 1914482 - | gamma-glutamyl phosphate reductase proB 1916628 - 1915849 - | glutamate 5-kinase TERM 591 1916503 - 1916545 + g 70 -14.2 -3.30441 | opp_overlap 1916475 GGCGCCGCGCGCGTG CGCGGCGGC-GATCGCGTCC ACGAG GGGCGCGATCTGCC-CGGCG TTCTCCCCGCTGATG CMS_1814 1918185 - 1916632 - | GTP-binding protein TERM 592 1916970 - 1917001 + g 74 -17.3 -2.71364 | CGACGCCGAGCTTGG CGAGGCGGTCGGC GAGGTA GCCGACGGCCTCG TCATTCCGGAAGTCG TERM 593 1918253 - 1918234 - R 81 -16.4 -3.551 | GCGGAACGCAGACAA GGGCGGGC CGAG GCCCGCCC TTGAAGTGCTGCGCG rpmA 1918559 - 1918305 - | 50S ribosomal protein L27 rplU 1918892 - 1918584 - | 50S ribosomal protein L21 CMS_1817 1919184 - 1919462 + | hypothetical protein CMS_1818 1922599 - 1919552 - | putative ribonuclease TERM 594 1920124 - 1920167 + g 74 -13.6 -3.53012 | overlap 1920125 TGATGCTGTGGGTGC TGGCCGCGGGCGTGCGCTGC TGCT GCTGCGCCTGGCCGCCGCCG TTTCCGCGACCGCCC TERM 595 1921596 - 1921622 + g 72 -11.4 -3.65046 | overlap 1921596 1921594 GGACGGCGGCGGCCG GCGTCGCGGCCG TCG CGGCGGCGCTGC TTCTTGGCCTCGAGG CMS_1819 1922905 - 1923513 + | putative integral membrane protein TERM 596 1923532 - 1923559 + T 93 -24.2 -2.82516 | opp_overlap 1923532 GCCGGGACGACGAGA GGGGCCGACCGG TCAT CCGGTCGGCCCC TCTCGTCGTGCGGAC TERM 597 1923559 - 1923532 - T 93 -24.2 -2.82516 | opp_overlap 1923532 GCCGGGACGACGAGA GGGGCCGACCGG TCAT CCGGTCGGCCCC TCTCGTCGTGCGGAC ndk 1923995 - 1923576 - | nucleoside diphosphate kinase CMS_1821 1924508 - 1924005 - | hypothetical protein TERM 598 1924233 - 1924203 - G 71 -11 -3.75738 | overlap 1924193 1924220 CAGCAGCAGGAAGAA CCCGCCGACCGCGA ACA TCGCGGGCAGCACG AAGCCGGTGAGGACG folC 1926079 - 1924505 - | folylpolyglutamate synthase ileS 1929381 - 1926076 - | isoleucyl-tRNA synthetase TERM 599 1929514 - 1929530 + r 80 -10.8 -4.15222 | CGTTCGGTTCTACTC GCCCGG TCGTC CCGGGC TTTCTTCCGAAGGCT TERM 600 1929611 - 1929650 + r 72 -14.2 -3.41002 | overlap 1929612 1929615 1929620 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 601 1929612 - 1929649 + r 73 -17.7 -2.63878 | overlap 1929611 1929615 1929620 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 602 1929615 - 1929646 + r 73 -18 -2.6072 | overlap 1929612 1929611 1929620 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 603 1929620 - 1929641 + r 71 -15.1 -3.10677 | overlap 1929615 1929612 1929611 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_1824 1930545 - 1929598 - | putative insertion element IS1121/Cmi2 chimera transposase TERM 604 1930597 - 1930549 - H 73 -15.4 -3.18383 | gap 1, opp_overlap 1930549 AGCGTGAGTCACGAA GACCTCCGGTGATGACGTGTGCT TGGT AACTCACATCGTC-CCGGAGGTC TTCGCTATCCGCTCA CMS_1825 1930770 - 1931675 + | putative DNA-binding protein CMS_1826 1932343 - 1931672 - | hypothetical protein CMS_1827 1932833 - 1932384 - | putatibe integral membrane protein CMS_1828 1934320 - 1932830 - | putative oxidoreductase TERM 605 1933151 - 1933199 + g 72 -13.8 -3.35679 | opp_overlap 1933127 GTCGCCCGTCTGCAG GGTCGTCGCGCTGCGTCGGCC-GC GAC GCAGGCCCACGCCGC-CGGCGAGC TTGTCCATCCAGCCG CMS_1829 1935192 - 1934431 - | hypothetical protein TERM 606 1935279 - 1935323 + G 70 -16.9 -2.78384 | opp_overlap 1935242 AGGCGACGCGGACCA CGGACGGCGGGCCGCGCGTCC CGC GGACGGCCCGCCCACCGCCCG TATCCTGGACGCCGG CMS_1830 1935206 - 1936312 + | putative sugar kinase CMS_1831 1937596 - 1936331 - | putative integral membrane transporter CMS_1832 1937631 - 1938332 + | hypothetical protein CMS_1834 1939669 - 1939157 - | hypothetical protein ribF 1940693 - 1939761 - | riboflavin kinase (FAD synthetase) CMS_1836 1941157 - 1940696 - | putative integral membrane protein CMS_1837 1941564 - 1941196 - | putative integral membrane protein truB 1942520 - 1941561 - | tRNA pseudouridine synthase CMS_1839 1942607 - 1943602 + | putative oxidoreductase CMS_1840 1944227 - 1943661 - | hypothetical protein mutY 1944293 - 1945144 + | A/G-specific adenine glycosylase rbfA 1945702 - 1945190 - | ribosome-binding factor A TERM 607 1945352 - 1945400 + g 77 -16.1 -3.28712 | gap 3, overlap 1945396 CTGGGCCTGCACGTC CGC-GTCGCGG-CGGCGCGCCTCC TCGA GGAGG-GCGTCGATCGCGGCCGCG TTCTCGGGCACGCCG infB 1948868 - 1946034 - | translation initiation factor IF-2 nusA 1950316 - 1949309 - | transcription elongation protein NusA TERM 608 1950387 - 1950344 - R 100 -24.7 -3.53444 | overlap 1950346 CTATTCGGTTGGAAA CACTCGAGGCTACCCGACC GGGAGG GGTCGGGCAGCCTCGAGGG CGGTGCGGAGGGGAT TERM 609 1950385 - 1950346 - R 100 -25.9 -3.34517 | overlap 1950344 ATTCGGTTGGAAACA CTCGAGGCTACCCGACC GGGAGG GGTCGGGCAGCCTCGAG GGCGGTGCGGAGGGG proS 1952174 - 1950402 - | prolyl tRNA synthetase CMS_1846 1953219 - 1952206 - | putative oxidoreductase CMS_1847 1955858 - 1953216 - | putative AMP-dependent synthetase/ligase fabH 1956936 - 1955905 - | 3-oxoacyl-[ACP] synthase III ispG 1958188 - 1957043 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase CMS_1850 1959732 - 1958284 - | putative metalloprotease TERM 610 1959378 - 1959343 - G 72 -11.6 -3.63991 | overlap 1959344 GAGGAGGTCGAAGAA GCCGCGGCCGGCGCGG TCGT CGGCGTCGGGGGCGGC CGGGGACCCGGCGTC TERM 611 1959746 - 1959697 - G 77 -17.1 -3.28416 | gap 1 GAGGATGTAGAGGAA GACG-CCGTCCATGGTGGGAGAGG CTA CCTCCCGCACCCTGGGCGGACGCC GCCGTGGCGCGGATC CMS_1851 1959828 - 1961093 + | serine/threonine-protein kinase CMS_1852 1961138 - 1961767 + | hypothetical protein dxr 1963047 - 1961965 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase CMS_1854 1964078 - 1963056 - | putative secreted peptidyl-prolyl cis-trans isomerase TERM 612 1964292 - 1964340 + H 73 -15.4 -3.18383 | gap 1, opp_overlap 1964292 TGAGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_1855 1964344 - 1965306 + | putative insertion element ISCmi2 transposase CMS_1858 1965995 - 1966849 + | putative methyltransferase CMS_1859 1967603 - 1966875 - | putative integral membrane protein TERM 613 1967112 - 1967054 - G 83 -21.1 -2.65264 | gap 3 CCAGCACGGACAGCA CGACGACGGC-GAGCAG-CGCCGCGGCG AGCGCG CGCCGCAGCGTCCGCTCGGCCGGCG-CG CGGCCCGGCCGTGGC deaD 1967798 - 1969555 + | cold-shock DEAD-box RNA helicase TERM 614 1969604 - 1969651 + F 100 -22.8 -3.6215 | opp_overlap 1969621, overlap 1969605 1969607 TCCTCGGGCGGATTC TCGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTGG TTTCGGGTGAGTTGC TERM 615 1969605 - 1969650 + F 89 -24.1 -2.76969 | opp_overlap 1969621, overlap 1969604 1969607 CCTCGGGCGGATTCT CGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTG GTTTCGGGTGAGTTG TERM 616 1969607 - 1969648 + F 91 -23.1 -2.92792 | opp_overlap 1969621, overlap 1969605 1969604 TCGGGCGGATTCTCG TGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCG TGGTTTCGGGTGAGT TERM 617 1970990 - 1970963 - g 100 -19.2 -4.21194 | opp_overlap 1970956 1970953 GCCGACCACGCAAAA CGCTCGACTGGG ACAC CCCAGCCGAGCG AATGCGTGCTCTACT CMS_1861 1969726 - 1971018 + | putative insertion element ISCmi3 transposase CMS_1863 1971311 - 1971117 - | hypothetical protein CMS_1864 1972006 - 1971383 - | putative integral membrane protein CMS_1865 1972231 - 1972797 + | putative acetyltransferase CMS_1866 1972779 - 1973657 + | putative hydrolase CMS_1867 1974990 - 1973674 - | putative esterase CMS_1868 1975068 - 1975694 + | TetR family transcriptional regulator CMS_1869 1976128 - 1975691 - | putative protein phosphatase CMS_1870 1976238 - 1976591 + | ArsR family transcriptional regulator CMS_1871 1976588 - 1977298 + | putative integral membrane protein TERM 618 1977305 - 1977343 + F 100 -27.5 -2.52676 | TGCTGCTGAATCCGC GAGGAGCACGGCCGGGC ATCGC GCCCGGCCGTGCTCCGC TCACTTCGACAGCTG CMS_1874 1980961 - 1981431 + | putative integral membrane protein CMS_1875 1982104 - 1981442 - | putative integral membrane protein CMS_1876 1982755 - 1982231 - | hypothetical protein CMS_1877 1983261 - 1982752 - | hypothetical protein CMS_1878 1983749 - 1983258 - | hypothetical protein CMS_1879 1987322 - 1984188 - | TD repeat-containing membrane-anchored protein CMS_1880 1990652 - 1987341 - | hypothetical protein CMS_1881 1991700 - 1990819 - | putative iron-chelating protein lipB 1991795 - 1992493 + | lipoyltransferase lipA 1992490 - 1993479 + | lipoyl synthase CMS_1884 1993554 - 1994189 + | PadR family transcriptional regulator TERM 619 1996585 - 1996621 + T 93 -20.9 -3.61398 | opp_overlap 1996588 1996591, overlap 1996587 1996588 1996591 CGAGCGTCCGGGAAC GCAGAAGGCCCGGTCTC CAG GAGACCGGGCCTTCATC TTGTTGCGGGGGCAG TERM 620 1996587 - 1996619 + T 100 -22.1 -3.38812 | opp_overlap 1996588 1996591, overlap 1996585 1996588 1996591 AGCGTCCGGGAACGC AGAAGGCCCGGTCTC CAG GAGACCGGGCCTTCA TCTTGTTGCGGGGGC TERM 621 1996588 - 1996618 + T 100 -25.6 -2.63073 | opp_overlap 1996588 1996591, overlap 1996587 1996585 1996591 GCGTCCGGGAACGCA GAAGGCCCGGTCTC CAG GAGACCGGGCCTTC ATCTTGTTGCGGGGG TERM 622 1996618 - 1996588 - T 100 -25.6 -2.52464 | opp_overlap 1996588 1996587 1996585 1996591, overlap 1996591 GCGTCCGGGAACGCA GAAGGCCCGGTCTC CAG GAGACCGGGCCTTC ATCTTGTTGCGGGGG TERM 623 1996591 - 1996615 + T 91 -21.5 -3.46509 | opp_overlap 1996588 1996591, overlap 1996588 1996587 1996585 TCCGGGAACGCAGAA GGCCCGGTCTC CAG GAGACCGGGCC TTCATCTTGTTGCGG TERM 624 1996615 - 1996591 - T 91 -21.5 -3.41878 | opp_overlap 1996591 1996588 1996587 1996585, overlap 1996588 TCCGGGAACGCAGAA GGCCCGGTCTC CAG GAGACCGGGCC TTCATCTTGTTGCGG CMS_1887 1999756 - 1996841 - | putative integral membrane protein CMS_1888 2000975 - 1999884 - | hypothetical protein TERM 625 2000004 - 1999971 - G 76 -15.3 -3.39327 | gap 1, overlap 1999974 CGTCGAGACGGAGAA GACGCGCAGGC-CGTC GGG GACGTGCCCGCGCACC TCGTCGCAGTTGTCG CMS_1889 2001189 - 2002604 + | hypothetical protein CMS_1891 2005443 - 2003521 - | putative DNA helicase CMS_1890 2002698 - 2003657 + | hypothetical protein CMS_1892 2006476 - 2005454 - | putative hydrolase CMS_1894 2010797 - 2007537 - | putative ATP-dependent DNA helicase CMS_1893 2006548 - 2007624 + | putative macrolide phosphotransferase CMS_1895 2014063 - 2010794 - | putative ATP-dependent DNA helicase CMS_1896 2014257 - 2014481 + | hypothetical protein CMS_1897 2014493 - 2014780 + | putative integral membrane protein TERM 626 2014831 - 2014795 - T 100 -25.2 -3.31263 | AGCGCACCCGCATAA CACGACGCCCGGTCCC GTCGA GGGGCCGGGCGTCGTG CGCCGGCCGGAGACG CMS_1898 2015585 - 2014857 - | hypothetical protein CMS_1899 2015726 - 2017288 + | putative ATP-dependent RNA helicase TERM 627 2018335 - 2018296 - g 72 -14.2 -3.41002 | overlap 2018297 2018300 2018305 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 628 2018334 - 2018297 - g 73 -17.7 -2.63878 | overlap 2018296 2018300 2018305 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 629 2018331 - 2018300 - g 73 -18 -2.6072 | overlap 2018297 2018296 2018305 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 630 2018326 - 2018305 - g 71 -15.1 -3.10677 | overlap 2018300 2018297 2018296 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_1900 2017386 - 2018348 + | putative insertion element IS1121 transposase TERM 631 2018424 - 2018384 - T 87 -21.9 -2.80816 | GCCGCACGGATCACA TCGCAGAGGGGCCGCATCC ACC GGATGCGGCCCCTCCGTCA CGCCCGGCTCCTGCT CMS_1901 2019331 - 2018456 - | hypothetical protein TERM 632 2021419 - 2021459 + G 73 -16.2 -3.01712 | CGCCGACATGCCGGC CGTCCTCG-CGCACGCGCGC GGC GAGCGCGT-CGTCGAGGGCG TCTTCAACGCGCGCG CMS_1903 2020454 - 2022151 + | putative Xaa-Pro aminopeptidase CMS_1904 2022874 - 2022209 - | hypothetical protein CMS_1905 2022979 - 2024280 + | hypothetical protein CMS_1906 2024264 - 2024815 + | putative integral membrane protein CMS_1907 2024805 - 2025980 + | putative ATP-binding protein CMS_1908 2026099 - 2026308 + | hypothetical protein CMS_1909 2026369 - 2027235 + | LysR family transcriptional regulator tatB 2027648 - 2027274 - | sec-independent protein translocase CMS_1911 2027800 - 2028432 + | putative O-methyltransferase TERM 633 2028485 - 2028525 + T 100 -38.5 -2.80443 | opp_overlap 2028485 2028490, overlap 2028490 AGTTACCCGCACATA CGACACCGCCCGCCCCGTC GTC GACGGGGCGGGCGGTGTCG TGTGGTGCGGTCTCG TERM 634 2028525 - 2028485 - T 100 -38.5 -2.88663 | opp_overlap 2028485 2028490, overlap 2028490 AGTTACCCGCACATA CGACACCGCCCGCCCCGTC GTC GACGGGGCGGGCGGTGTCG TGTGGTGCGGTCTCG TERM 635 2028490 - 2028520 + T 100 -29.8 -2.87468 | opp_overlap 2028490 2028485, overlap 2028485 CCCGCACATACGACA CCGCCCGCCCCGTC GTC GACGGGGCGGGCGG TGTCGTGTGGTGCGG TERM 636 2028520 - 2028490 - T 100 -29.8 -2.88999 | opp_overlap 2028485 2028490, overlap 2028485 CCCGCACATACGACA CCGCCCGCCCCGTC GTC GACGGGGCGGGCGG TGTCGTGTGGTGCGG CMS_1912 2029504 - 2028542 - | putative insertion element ISCmi2 transposase TERM 637 2029556 - 2029508 - R 73 -15.4 -3.18383 | gap 1, opp_overlap 2029508 AGCGTGAGTCACGAA GACCTCCGGTGATGACGTGTGCT TGGT AACTCACATCGTC-CCGGAGGTC TTCGCTATCCGCTCA CMS_1913 2029774 - 2029601 - | hypothetical protein CMS_1914 2031154 - 2029922 - | putative integral membrane protein dapE 2032242 - 2031136 - | succinyl-diaminopimelate desuccinylase CMS_1916 2032416 - 2033312 + | putative transferase CMS_1917 2034122 - 2033349 - | putative protein phosphatase CMS_1918 2035243 - 2034182 - | hypothetical protein CMS_1919 2035553 - 2036032 + | AsnC family transcriptional regulator CMS_1920 2036139 - 2036759 + | putative methylated-DNA--protein-cysteine methyltransferase tag 2036774 - 2037349 + | DNA-3-methyladenine glycosylase I CMS_1922 2038116 - 2037361 - | hypothetical protein TERM 638 2038210 - 2038181 - R 90 -20.7 -3.18264 | GCCCGGACGCACGAA GGCGGACGGCCCC CGAG GGGACCGCCCGCC GTCGGACGGACGTGA atpC 2038497 - 2038228 - | ATP synthase epsilon chain atpD 2039959 - 2038499 - | ATP synthase beta chain atpG 2040894 - 2039995 - | ATP synthase gamma chain atpA 2042602 - 2040944 - | ATP synthase alpha chain atpH 2043428 - 2042637 - | ATP synthase delta chain atpF 2043973 - 2043428 - | ATP synthase B chain atpE 2044239 - 2044006 - | ATP synthase C chain TERM 639 2044260 - 2044285 + r 70 -14.1 -3.23216 | GTTCCTTCCGGTTGG GTGATCTCGTC GGTG GACGAGATCGC TTAGTGCTCCTCCGC atpB 2044966 - 2044286 - | ATP synthase A chain TERM 640 2045311 - 2045358 + r 81 -17.6 -3.2244 | overlap 2045308 2045308 2045315 ACTGGGTCATGACGT TGGTGACACTCGGGCCGCGGGC GTGA GCCCGTGGCTCGAGTGGATCCG TTCAGTGTTGTAGTG TERM 641 2045315 - 2045354 + r 73 -17.8 -2.57335 | overlap 2045311 2045308 2045308 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTCGAGTGGA TCCGTTCAGTGTTGT CMS_1931 2046264 - 2045302 - | putative insertion element IS1121 transposase CMS_1932 2046393 - 2047496 + | putative aldolase TERM 642 2047773 - 2047802 + F 93 -7.8 -5.07652 | gap 1 GTCAACCCATCACGA TCGGCCCG-CTCG CCTTA CGGCTCGGGCCGA TTTTCTTTTCCCGGG CMS_1933 2047826 - 2048815 + | putative phage resistance protein TERM 643 2050244 - 2050254 + T 84 -2.4 -4.9725 | TGGGCGGTTTCATCG ACGC GGA GCGG TTTTTCTCTGCAAAT TERM 644 2050665 - 2050628 - T 100 -26.3 -4.15044 | TCCCCTGGCAACAAA CGACGACGGCCGGCCCC ATCG GGAGCCGGCCGCCGCCG TGTCACGCGCGGGCG ppc 2053417 - 2050685 - | phosphoenolpyruvate carboxylase CMS_1940 2054748 - 2053522 - | putative integral membrane efflux protein CMS_1941 2055421 - 2054954 - | hypothetical protein CMS_1942 2055520 - 2055858 + | hypothetical protein CMS_1943 2056747 - 2055938 - | hypothetical protein CMS_1944 2057108 - 2057776 + | putative two-component system response regulator CMS_1945 2057890 - 2058396 + | hypothetical protein CMS_1946 2058532 - 2058909 + | putative integral membrane protein TERM 645 2058965 - 2059004 + T 72 -14.2 -3.41002 | overlap 2058966 2058969 2058974 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 646 2058966 - 2059003 + T 73 -17.7 -2.63878 | overlap 2058965 2058969 2058974 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 647 2058969 - 2059000 + T 73 -18 -2.6072 | overlap 2058966 2058965 2058974 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 648 2058974 - 2058995 + T 71 -15.1 -3.10677 | overlap 2058969 2058966 2058965 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_1947 2059914 - 2058952 - | putative insertion element IS1121 transposase CMS_1948 2061820 - 2060012 - | putative DNA helicase CMS_1949 2063201 - 2062020 - | putative acyl-CoA dehydrogenase CMS_1950 2064105 - 2063254 - | putative dioxygenase CMS_1951 2064230 - 2065021 + | putative lipolytic enzyme CMS_1952 2066252 - 2065038 - | putative carboxypeptidase CMS_1953 2067103 - 2066249 - | putative tRNA/rRNA methyltransferase CMS_1954 2067215 - 2068069 + | putative NAD-dependent deacetylase CMS_1955 2068066 - 2068692 + | putative phosphoglycerate mutase CMS_1956 2069850 - 2068756 - | putative glycosyl transferase CMS_1957 2070743 - 2069847 - | putative hydrolase treS 2070876 - 2072609 + | trehalose synthase CMS_1959 2072620 - 2073321 + | putative exonuclease TERM 649 2073378 - 2073403 + T 84 -19 -3.23216 | opp_overlap 2073378 CCCCGGGACGACGAA GGGCGCCCGG CCTGAC CCGGGCGCCC TTCGTCGTGCTGCAG TERM 650 2073403 - 2073378 - T 84 -19 -3.21099 | opp_overlap 2073378 CCCCGGGACGACGAA GGGCGCCCGG CCTGAC CCGGGCGCCC TTCGTCGTGCTGCAG rpmE2 2073686 - 2073429 - | 50S ribosomal protein L31 CMS_1961 2074637 - 2073816 - | putative ABC transporter ATP-binding subunit CMS_1962 2075876 - 2074692 - | putative glycosyl transferase glgC 2075923 - 2077164 + | glucose-1-phosphate adenylyltransferase serB 2077161 - 2077859 + | phosphoserine phosphatase CMS_1965 2078860 - 2077904 - | putative phosphotransferase TERM 651 2078169 - 2078122 - G 70 -16.3 -2.64933 | GAGCGAGGTACATGA TCG-CCGCGGCGACGTCGAGCCC GGCG GGGC-CGAGGCCGCAGCGGTCGA AGTCGATGACGGACA fabG 2079594 - 2078884 - | 3-oxoacyl-[acyl-carrier-protein] reductase CMS_1967 2079715 - 2080170 + | hypothetical protein CMS_1968 2080167 - 2080424 + | hypothetical protein CMS_1969 2080421 - 2081266 + | putative sortase-sorted surface protein CMS_1970 2082916 - 2081318 - | putative ABC transporter ATP binding protein CMS_1971 2083473 - 2083138 - | hypothetical protein CMS_1972 2084240 - 2083470 - | putative ABC transporter ATP-binding subunit CMS_1973 2084574 - 2084254 - | putative dioxygenase ferredoxin subunit CMS_1974 2085782 - 2084571 - | hypothetical protein TERM 652 2084599 - 2084656 + g 74 -11.8 -3.73402 | gap 1, overlap 2084600 TCCGTGGAGGTGCTG GCGGAGAGCTCGGCCTCGATG-GCGGC CTGCA GCCGCTCCTCCAGGTCGGGCACGCCGA TTTGCTGCACGATCT CMS_1975 2087201 - 2085783 - | hypothetical protein CMS_1976 2087508 - 2088476 + | putative cytochrome oxidase assembly protein CMS_1977 2089682 - 2088762 - | putative cytochrome oxidase assembly factor tkt 2089866 - 2091947 + | transketolase TERM 653 2091994 - 2091950 - f 90 -21.3 -3.28712 | CGCCTCCCTCTAGAA GCTGACGAGGAGCGGGGCGGC CGA GCTGCTCCGCTCCCCGCCGGC CCGCCCCGACCGAGC tal 2092098 - 2093213 + | transaldolase pgi 2093210 - 2094805 + | glucose-6-phosphate isomerase zwf 2094844 - 2096385 + | glucose-6-phosphate 1-dehydrogenase CMS_1982 2096382 - 2097380 + | hypothetical protein pgl 2097377 - 2098147 + | 6-phosphogluconolactonase TERM 654 2098178 - 2098209 + T 93 -24.6 -2.62616 | opp_overlap 2098182, overlap 2098182 GAGCCGGGCTCGGCA CGAAGGGCGGATCC TCCG GGATCCGCCCTTCG TCGTCTCCGGCGTGG TERM 655 2098182 - 2098205 + T 81 -18.2 -3.24747 | opp_overlap 2098182, overlap 2098178 CGGGCTCGGCACGAA GGGCGGATCC TCCG GGATCCGCCC TTCGTCGTCTCCGGC TERM 656 2098205 - 2098182 - T 78 -18.2 -3.14132 | opp_overlap 2098182 2098178 CGGGCTCGGCACGAA GGGCGGATCC TCCG GGATCCGCCC TTCGTCGTCTCCGGC TERM 657 2098270 - 2098306 + T 100 -26.7 -2.86177 | opp_overlap 2098273 2098276, overlap 2098272 2098276 GAGGAGCGCGAGCAC CAAGAACGCCCCCGTCC TCA GGACGGGGGCGTTCATG TGTCGTGTGCGGTCT TERM 658 2098272 - 2098304 + T 91 -23.5 -2.97925 | opp_overlap 2098273 2098276, overlap 2098270 2098276 GGAGCGCGAGCACCA AGAACGCCCCCGTCC TCA GGACGGGGGCGTTCA TGTGTCGTGTGCGGT TERM 659 2098303 - 2098273 - T 100 -27 -3.21416 | opp_overlap 2098272 2098270 2098276, overlap 2098276 GAGCGCGAGCACCAA GAACGCCCCCGTCC TCA GGACGGGGGCGTTC ATGTGTCGTGTGCGG TERM 660 2098276 - 2098300 + T 100 -22.9 -3.34534 | opp_overlap 2098273 2098276, overlap 2098272 2098270 CGCGAGCACCAAGAA CGCCCCCGTCC TCA GGACGGGGGCG TTCATGTGTCGTGTG TERM 661 2098300 - 2098276 - T 100 -22.9 -3.75024 | opp_overlap 2098276 2098272 2098270, overlap 2098273 CGCGAGCACCAAGAA CGCCCCCGTCC TCA GGACGGGGGCG TTCATGTGTCGTGTG CMS_1984 2098695 - 2098327 - | hypothetical protein secG 2098958 - 2098707 - | protein-export membrane protein tpiA 2099903 - 2099100 - | triosephosphate isomerase pgk 2101108 - 2099894 - | phosphoglycerate kinase gap 2102122 - 2101115 - | glyceraldehyde-3-phosphate dehydrogenase sodB 2102876 - 2102250 - | superoxide dismutase Fe-Zn CMS_1990 2104025 - 2103045 - | hypothetical protein CMS_1991 2104942 - 2104055 - | hypothetical protein TERM 662 2104750 - 2104718 - G 71 -11.1 -3.7941 | opp_overlap 2104719, overlap 2104719 CAGCTCGGAGAAGAA GTCGCCGCCGCGGAC GTC GACCACCGCGGCGAT CTTGGGCAGCGACGT uvrC 2106935 - 2105007 - | ABC excision nuclease subunit C uvrA 2109856 - 2106935 - | ABC excision nuclease subunit A uvrB 2112004 - 2109938 - | ABC excision nuclease subunit B coaE 2112628 - 2112014 - | dephospho-CoA kinase rpsA 2114238 - 2112784 - | 30S ribosomal protein S1 TERM 663 2114095 - 2114140 + g 73 -15.5 -3.20633 | gap 1, overlap 2114072 2114130 GACCTCGTCCCGATC GATCTTC-ACGACGGTGCCCTC GAT GAGGTCTCCGTCGTTGAAGAAC TTCAGTGTCTTCTCG CMS_1997 2116116 - 2114437 - | hypothetical protein fruB 2116571 - 2116113 - | multiphosphoryl transfer protein polA 2119305 - 2116621 - | DNA polymerase I CMS_2000 2119360 - 2119794 + | hypothetical protein TERM 664 2119878 - 2119927 + F 70 -14.5 -3.18383 | gap 2, opp_overlap 2119878 GGGGCGGATAGCGAA GACCTCCG-GGACGATG-TGGGT TACCAC ACTCATCAACGTCCACGGAGGTC TTCGTGACTCACGCT CMS_2001 2119931 - 2120893 + | putative insertion element ISCmi2 transposase TERM 665 2120917 - 2120956 + T 72 -14.2 -3.41002 | overlap 2120918 2120921 2120926 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 666 2120918 - 2120955 + T 73 -17.7 -2.63878 | overlap 2120917 2120921 2120926 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 667 2120921 - 2120952 + T 73 -18 -2.6072 | overlap 2120918 2120917 2120926 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 668 2120926 - 2120947 + T 71 -15.1 -3.10677 | overlap 2120921 2120918 2120917 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2002 2121866 - 2120904 - | putative insertion element IS1121 transposase CMS_2003 2122572 - 2121964 - | putative two-component system response regulator TERM 669 2122764 - 2122795 + r 100 -27.4 -2.85351 | overlap 2122766 GAACGTGACGCGGGA GAGGGCGGGCGACC ACGT GGTCGCCCGCCCTC TATCGTGTCACGCGG TERM 670 2122766 - 2122793 + r 95 -24.2 -2.97747 | overlap 2122764 ACGTGACGCGGGAGA GGGCGGGCGACC ACGT GGTCGCCCGCCC TCTATCGTGTCACGC pyk 2124294 - 2122837 - | pyruvate kinase CMS_2005 2125839 - 2124382 - | putative glutamate synthase beta subunit CMS_2006 2130403 - 2125832 - | putative glutamate synthase alpha subunit lgt 2131539 - 2130505 - | prolipoprotein diacylglyceryl transferase trpA 2132417 - 2131599 - | tryptophan synthase alpha subunit trpB 2133628 - 2132414 - | tryptophan synthase beta subunit trpC 2134401 - 2133625 - | indole-3-glycerol phosphate synthase CMS_2011 2134644 - 2134402 - | hypothetical protein CMS_2012 2135386 - 2134685 - | hypothetical protein trpE 2136942 - 2135386 - | anthranilate synthase component I hisI 2137355 - 2136939 - | phosphoribosyl-AMP cyclohydrolase hisF 2138161 - 2137352 - | imidazole glycerol phosphate synthase subunit hisG 2139003 - 2138164 - | ATP phosphoribosyltransferase hisE 2139313 - 2139050 - | phosphoribosyl-ATP pyrophosphatase rpe 2140493 - 2139825 - | ribulose-phosphate 3-epimerase CMS_2021 2141970 - 2140504 - | putative Sun-family protein fmt 2142955 - 2142038 - | methionyl-tRNA formyltransferase priA 2145107 - 2143071 - | putative primosomal protein n' (replication factor y) TERM 671 2144040 - 2144061 + g 79 -2.9 -4.82901 | gap 1, overlap 2144042 CGTCTGCGAGGTGGT CGGGATCACC CGC GG-GGTCCGG TTTTTCTCCGGCGCG metK 2146433 - 2145222 - | S-adenosylmethionine synthetase coaBC 2147690 - 2146473 - | coenzyme A biosynthesis bifunctional protein rpoZ 2148038 - 2147769 - | putative DNA-directed RNA polymerase omega chain gmk 2148917 - 2148087 - | guanylate kinase pyrF 2149885 - 2148992 - | orotidine 5'-phosphate decarboxylase carB 2153172 - 2149882 - | carbamoylphosphate synthetase large chain TERM 672 2151738 - 2151775 + g 78 -17.7 -3.14344 | GGAGCGTCGGGGCGT CGAGCTCGTCGGCGTCG CGCA CGGCGTCGGCGACCTCG TTGATGAGCACGATC carA 2154350 - 2153172 - | carbamoyl-phosphate synthase,pyrimidine-specific, small chain CMS_2031 2154874 - 2154347 - | hypothetical protein pyrC 2156262 - 2154871 - | dihydroorotase pyrB 2157215 - 2156259 - | aspartate carbamoyltransferase pyrR 2157796 - 2157212 - | pyrimidine operon regulatory protein TERM 673 2157283 - 2157341 + g 83 -15.5 -3.61398 | gap 3, opp_overlap 2157314, overlap 2157252 CGATGCTCACCGAGT CCTCGCCGTCG-GTCTCGTCGAGCCGGA CGAAGA TCCG-CTCGGAGAGGCTCGACGGC-AGG TTCTTGCCCACGAAG acsA 2159932 - 2157908 - | acetyl-coenzyme A synthetase CMS_2036 2160881 - 2160006 - | putative integral membrane transport protein CMS_2037 2161930 - 2160878 - | putative substrate-binding transport protein CMS_2038 2162729 - 2162013 - | putative ATP-binding ABC transport protein CMS_2039 2164606 - 2162978 - | putative sortase-sorted surface protein nusB 2165096 - 2164683 - | transcription termination protein efp 2165663 - 2165100 - | elongation factor P aroQ 2166215 - 2165775 - | 3-dehydroquinate dehydratase TERM 674 2166252 - 2166291 + r 72 -14.2 -3.41002 | overlap 2166253 2166256 2166261 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 675 2166253 - 2166290 + r 73 -17.7 -2.63878 | overlap 2166252 2166256 2166261 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 676 2166256 - 2166287 + r 73 -18 -2.6072 | overlap 2166253 2166252 2166261 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 677 2166261 - 2166282 + r 71 -15.1 -3.10677 | overlap 2166256 2166253 2166252 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2043 2167201 - 2166239 - | putative insertion element IS1121 transposase thiL 2168456 - 2167299 - | putative thiamine monphosphate kinase CMS_2045 2168481 - 2168987 + | putative lipoprotein CMS_2046 2169813 - 2168944 - | putative glycosyl transferase ddl 2171097 - 2169982 - | D-alanine-D-alanine ligase gpsA 2172167 - 2171094 - | glycerol-3-phosphate dehydrogenase CMS_2049 2173008 - 2172160 - | putative acyltransferase CMS_2050 2174390 - 2173020 - | UDP-N-acetylglucosamine transferase TERM 678 2174409 - 2174451 + r 81 -19.1 -3.03441 | gap 1 GTTCTCCAGAGCTGC CGGCCGGGCCGGCAAGGTGC GCGG GCGCCATGC-GGCCCGTCCG TGTTCGAAGGTGGTG leuD 2175005 - 2174391 - | 3-isopropylmalate dehydratase small subunit leuC 2176489 - 2175008 - | 3-isopropylmalate dehydratase large subunit CMS_2053 2177376 - 2176555 - | hypothetical protein CMS_2054 2178413 - 2177373 - | integral membrane protein CMS_2055 2178543 - 2179238 + | TetR family transcriptional regulator CMS_2056 2180064 - 2179267 - | putative oxidoreductase CMS_2057 2180151 - 2181569 + | putative Cys/Met metabolism enzyme metX 2181611 - 2182822 + | homoserine o-acetyltransferase CMS_2059 2182940 - 2183620 + | putative two-component system response regulator TERM 679 2183736 - 2183687 - g 70 -12.7 -3.31263 | gap 1 ACGGCATGTGGACAA TCGGCCCCGGCCGTCACGCGGGCG TGC CTCCGGCGTGACGGACGC-GCCTA GGATCGGAGGCACAC CMS_2060 2183679 - 2184950 + | putative two-component system sensor kinase CMS_2061 2184947 - 2186149 + | putative integral membrane protein TERM 680 2187210 - 2187171 - g 72 -14.2 -3.41002 | overlap 2187172 2187175 2187180 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 681 2187209 - 2187172 - g 73 -17.7 -2.63878 | overlap 2187171 2187175 2187180 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 682 2187206 - 2187175 - g 73 -18 -2.6072 | overlap 2187172 2187171 2187180 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 683 2187201 - 2187180 - g 71 -15.1 -3.10677 | overlap 2187175 2187172 2187171 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_2062 2186261 - 2187223 + | putative insertion element IS1121 transposase CMS_2063 2187287 - 2187907 + | putative two-component system response regulator CMS_2064 2189204 - 2187924 - | putative integral membrane efflux protein CMS_2065 2189560 - 2189243 - | hypothetical protein TERM 684 2189793 - 2189779 - g 82 -4.2 -4.79352 | CCATGGACAAGAAAA CGAAGA TCA TCATCG GGGTCGCGGGCGGCG CMS_2066 2189766 - 2190446 + | putative secreted protein CMS_2067 2191375 - 2190443 - | hypothetical protein CMS_2068 2191457 - 2192536 + | putative oxidoreductase CMS_2069 2193646 - 2192603 - | putative integral membrane protein CMS_2070 2195069 - 2193639 - | putative integral membrane protein CMS_2072 2196821 - 2200627 + | putative dehydrogenase complex protein TERM 685 2200690 - 2200654 - T 82 -20.2 -2.71364 | gap 1, opp_overlap 2200659, overlap 2200659 TGACGCCCGGAACGA CG-AGAGGCCCGGGCCC CCAG GGGACCGGGCCTCTTCG CGTGCGGGCGGCTGA TERM 686 2200684 - 2200659 - T 76 -17.5 -2.86164 | opp_overlap 2200659, overlap 2200654 CCCGGAACGACGAGA GGCCCGGGCCC CCAG GGGACCGGGCC TCTTCGCGTGCGGGC TERM 687 2200659 - 2200684 + T 78 -17.5 -3.05844 | opp_overlap 2200659 2200654 CCCGGAACGACGAGA GGCCCGGGCCC CCAG GGGACCGGGCC TCTTCGCGTGCGGGC CMS_2073 2201169 - 2200729 - | putative acetyltransferase CMS_2074 2201446 - 2201204 - | putative anti sigma factor sigR 2202099 - 2201443 - | putative ECF RNA polymerase sigma factor TERM 688 2202108 - 2202148 + H 82 -20.3 -2.67515 | overlap 2202105 AGGCCACGACCGCCT CGACGACCGCGGCGGGCGC CGG GCGCGCGTCGCGATCGGCG TCGTCTGCTGCTGGA aroA 2202335 - 2203798 + | 3-phosphoshikimate 1-carboxyvinyltransferase CMS_2077 2203795 - 2204859 + | putative ATP-binding protein CMS_2078 2204896 - 2205708 + | putative monophosphatase TERM 689 2205971 - 2205920 - f 79 -14.2 -3.61715 | gap 1 GAGCGTGCTGAAGAA GGTC-GCCGACGCGGCCGCGACGCC CAC GGCGGTGCCGACGCGCTGGCCGACC TGCGCCATGGATCCG TERM 690 2207755 - 2207745 - g 71 -8.2 -4.02817 | opp_overlap 2207745, overlap 2207739 GGCGGAGAAGAACAA CCCC GTC GGGG ACGTGGTGTTCGGCC CMS_2080 2207470 - 2208552 + | putative substrate-binding transport protein TERM 691 2208609 - 2208635 + G 72 -12.2 -3.63991 | GTGGCGATCCCCGGG CTCGACCTCGAG ATC CACGAGGGCGAG TTCTTCACCCTCCTC CMS_2081 2208576 - 2209580 + | putative ABC-transporter ATP-binding protein TERM 692 2211439 - 2211416 - T 82 -13.8 -3.84825 | TCCACGCAGACGAAA GGCCCCGTCC GGGT GGATGGGGCC TCGCGTCTCGCCGGA smpB 2212489 - 2212013 - | ssra-binding protein ftsX 2213473 - 2212556 - | putative cell division protein ftsE 2215086 - 2213470 - | putative cell division-associated ATP-binding ABC transport protein prfB 2216292 - 2215189 - | chain release factor 2 CMS_2087 2216368 - 2217672 + | putative integral membrane transport protein CMS_2088 2218219 - 2217680 - | putative lipoprotein CMS_2089 2218671 - 2218216 - | hypothetical protein CMS_2090 2218984 - 2218646 - | hypothetical protein CMS_2091 2219217 - 2219023 - | hypothetical protein CMS_2093 2221040 - 2220216 - | putative type II secretion protein protein CMS_2094 2222266 - 2221076 - | putative type II secretion protein TERM 693 2221777 - 2221748 - G 82 -19.3 -3.15544 | GCTCATGCGCAGGAA CTCGGCGGCCTGC AGCG GCAGGCTGCCGAG GGCCACGAGGTGGTC TERM 694 2222005 - 2222042 + g 71 -15.6 -3.16191 | gap 1, opp_overlap 2222027 2222029 GCGGCGTCAGCTCGG CGACGCCGGCCCGCG CGACGAAGA CGCGGGTCGGCG-CG TTGATCCAGATCTCC xylB 2223816 - 2222383 - | xylulose kinase CMS_2096 2223994 - 2224917 + | putative 1-aminocyclopropane-1-carboxylate deaminase CMS_2097 2225042 - 2225764 + | putative integral membrane protein CMS_2098 2226857 - 2225835 - | putative cation efflux protein CMS_2099 2227370 - 2226876 - | hypothetical protein TERM 695 2227261 - 2227241 - G 70 -14.7 -3.21395 | overlap 2227239 AGCGCGCCGAGAAGA TCCCGGGCG ATC CGCCCAGGA TGTCGACGCCGATTC rph 2228232 - 2227495 - | ribonuclease PH racE 2229125 - 2228241 - | glutamate racemase 1 CMS_2102 2230647 - 2229184 - | hypothetical protein CMS_2103 2230738 - 2232051 + | hypothetical protein CMS_2104 2232388 - 2232101 - | hypothetical protein CMS_2105 2234021 - 2232450 - | putative integral membrane transport protein CMS_2106 2235940 - 2233997 - | putative ABC transporter, ATP-binding protein CMS_2107 2236234 - 2236926 + | hypothetical protein CMS_2108 2236963 - 2237763 + | putative polysaccharide export protein TERM 696 2237871 - 2237906 + G 70 -14 -3.30124 | gap 1, opp_overlap 2237867, overlap 2237872 2237881 AGCTTCAAGGACCTC TTCG-CCGGATCGGCGC GCC GCGCCCGTCCGGGCGAG TTCTGGGCGCTGCGC CMS_2109 2237763 - 2238542 + | putative polysaccharide export protein CMS_2110 2238627 - 2238938 + | hypothetical protein CMS_2111 2239251 - 2238928 - | putative DNA-binding protein CMS_2112 2239406 - 2240155 + | hypothetical protein TERM 697 2240160 - 2240140 - T 71 -11.1 -3.78934 | opp_overlap 2240149, overlap 2240137 CGTCGCCGAGAAGAA GGCCGCCAA GGG CTGACGGCC CTCCGCGCGGCGGTC CMS_2113 2241454 - 2240198 - | hypothetical protein CMS_2114 2242457 - 2241582 - | putative glycosyl transferase CMS_2115 2243275 - 2242454 - | putative transferase CMS_2116 2244276 - 2243272 - | putative glycosyl transferase TERM 698 2244479 - 2244452 - R 89 -20.6 -3.21099 | GTCGCGGACGACGAA GGGCGGACCGGC GTCC GCCGATCCGCCC CTCGCGATGCGCCCG CMS_2117 2246049 - 2244496 - | putative protease CMS_2118 2247193 - 2246279 - | hypothetical protein CMS_2119 2247744 - 2247184 - | hypothetical protein CMS_2120 2247925 - 2249130 + | putative aminotransferase CMS_2121 2249260 - 2250195 + | putative ABC transporter ATP-binding protein CMS_2122 2250192 - 2251031 + | putative integral membrane transport protein CMS_2123 2251127 - 2252368 + | putative two-component sensor kinase CMS_2124 2252425 - 2253063 + | putative two-component response regulator clpS 2253167 - 2253541 + | atp-dependent Clp protease adaptor protein ClpS CMS_2126 2253538 - 2254053 + | hypothetical protein CMS_2127 2254167 - 2255180 + | hypothetical protein CMS_2128 2255177 - 2255806 + | hypothetical protein CMS_2129 2255838 - 2256752 + | hypothetical protein TERM 699 2256776 - 2256815 + T 72 -14.2 -3.41002 | overlap 2256777 2256780 2256785 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 700 2256777 - 2256814 + T 73 -17.7 -2.63878 | overlap 2256776 2256780 2256785 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 701 2256780 - 2256811 + T 73 -18 -2.6072 | overlap 2256777 2256776 2256785 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 702 2256785 - 2256806 + T 71 -15.1 -3.10677 | overlap 2256780 2256777 2256776 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2130 2257725 - 2256763 - | putative insertion element IS1121 transposase TERM 703 2257958 - 2258006 + G 71 -15.3 -3.14132 | gap 2 CGTGCCGTCCGCGTT CGTGGGC-GG-CGTCGGCGGCGT GGGCG GCGTCGCCGGCGTCCCGTCCGCG TTCGTCGGCGGGGCC CMS_2131 2257842 - 2258417 + | hypothetical protein CMS_2132 2258419 - 2259129 + | putative two component system response regulator CMS_2133 2259126 - 2260592 + | putative two-component system sensor kinase CMS_2134 2261119 - 2260631 - | hypothetical protein CMS_2135 2262258 - 2261116 - | hypothetical protein CMS_2136 2262390 - 2263328 + | putative hydrolase CMS_2137 2263783 - 2263355 - | hypothetical protein CMS_2138 2263940 - 2264476 + | putative ATP/GTP binding protein CMS_2139 2264851 - 2264483 - | hypothetical protein CMS_2140 2264913 - 2265365 + | MarR family transcriptional regulator purA 2266888 - 2265599 - | adenylosuccinate synthetase CMS_2143 2267512 - 2266970 - | hypothetical protein CMS_2144 2267570 - 2268748 + | putative nuclease CMS_2145 2268748 - 2271780 + | putative nuclease CMS_2146 2272045 - 2271842 - | putative integral membrane protein CMS_2149 2273688 - 2274380 + | TetR family transcriptional regulator CMS_2150 2274377 - 2275072 + | hypothetical protein CMS_2151 2275069 - 2277174 + | putative ABC transporter CMS_2152 2277481 - 2277194 - | putative integral membrane protein CMS_2153 2278098 - 2277478 - | hypothetical protein CMS_2154 2278161 - 2280083 + | putative secreted protein CMS_2155 2280219 - 2280455 + | putative DNA-binding protein CMS_2156 2280455 - 2281759 + | hypothetical protein CMS_2157 2282280 - 2281786 - | putative oxidoreductase CMS_2158 2282603 - 2282277 - | ferredoxin CMS_2159 2282710 - 2283180 + | MerR family transcriptional regulator TERM 704 2283223 - 2283262 + T 72 -14.2 -3.41002 | overlap 2283224 2283227 2283232 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 705 2283224 - 2283261 + T 73 -17.7 -2.63878 | overlap 2283223 2283227 2283232 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 706 2283227 - 2283258 + T 73 -18 -2.6072 | overlap 2283224 2283223 2283232 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 707 2283232 - 2283253 + T 71 -15.1 -3.10677 | overlap 2283227 2283224 2283223 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2160 2284172 - 2283210 - | putative insertion element IS1121 transposase deaD 2286555 - 2284270 - | putative ATP-dependent helicase CMS_2164 2290301 - 2290699 + | hypothetical protein CMS_2165 2290717 - 2291115 + | putative lipoprotein CMS_2166 2292191 - 2291112 - | putative integral membrane protein TERM 708 2292345 - 2292384 + r 72 -14.2 -3.41002 | overlap 2292346 2292349 2292354 AGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 709 2292346 - 2292383 + r 73 -17.7 -2.63878 | overlap 2292345 2292349 2292354 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 710 2292349 - 2292380 + r 73 -18 -2.6072 | overlap 2292346 2292345 2292354 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 711 2292354 - 2292375 + r 71 -15.1 -3.10677 | overlap 2292349 2292346 2292345 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2167 2293294 - 2292332 - | putative insertion element IS1121 transposase CMS_2168 2294438 - 2293392 - | LysR family trancsriptional regulator CMS_2169 2294517 - 2294948 + | hypothetical protein TERM 712 2296167 - 2296197 + G 75 -13.2 -3.65046 | overlap 2296170 GCCGGCGCTCGCGGT GGCGGCGATCGCGG TGG CGGCGATCGCCCTC TTCTTCCGCTCGCCC CMS_2170 2295058 - 2296536 + | putative integral membrane protein CMS_2171 2298135 - 2296633 - | putative integral membrane transport protein CMS_2172 2298226 - 2300163 + | putative two component system sensor kinase CMS_2173 2300160 - 2300825 + | putative two-component response regulator CMS_2174 2300872 - 2301219 + | hypothetical protein CMS_2175 2301963 - 2301574 - | putative NUDIX hydrolase CMS_2177 2303467 - 2304372 + | putative hydrolase peh 2304518 - 2306041 + | endo-polygalacturonase CMS_2179 2307367 - 2306114 - | hypothetical protein CMS_2180 2308072 - 2307410 - | hypothetical protein TERM 713 2307766 - 2307797 + g 77 -13 -3.78934 | gap 1 CGACCTTCGCGCACG CCTCGCGCA-CGCGC CAG GCGCGGTTCGTGAGG TTCTTCTCGACGACC CMS_2181 2309248 - 2308139 - | putative integral membrane protein CMS_2182 2310386 - 2309517 - | putative integral membrane protein CMS_2183 2310915 - 2310454 - | MarR family transcriptional regulator TERM 714 2311020 - 2310995 - R 71 -8.4 -4.08767 | gap 1 TGGATCTGTGGAAAA GCTCCGACATG TGAGG CAT-TCGGAGC GGCGCGCTCAGGCGC CMS_2184 2311741 - 2311040 - | putative hydrolase CMS_2186 2312828 - 2312133 - | hypothetical protein CMS_2187 2313199 - 2312939 - | putative regulatory protein CMS_2188 2314144 - 2313227 - | putative integral membrane protein CMS_2189 2314315 - 2314752 + | hypothetical protein CMS_2190 2314797 - 2315315 + | putative acetyl transferase TERM 715 2315339 - 2315378 + T 72 -14.2 -3.41002 | overlap 2315340 2315343 2315348 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 716 2315340 - 2315377 + T 73 -17.7 -2.63878 | overlap 2315339 2315343 2315348 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 717 2315343 - 2315374 + T 73 -18 -2.6072 | overlap 2315340 2315339 2315348 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 718 2315348 - 2315369 + T 71 -15.1 -3.10677 | overlap 2315343 2315340 2315339 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2191 2316288 - 2315326 - | putative insertion element IS1121 transposase TERM 719 2316447 - 2316495 + H 73 -15.4 -3.18383 | gap 1, opp_overlap 2316447 TGAGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_2192 2316499 - 2317461 + | putative insertion element ISCmi2 transposase CMS_2193 2317949 - 2317458 - | hypothetical protein gabT 2318114 - 2319436 + | putative 4-aminobutyrate aminotransferase ansA 2319436 - 2320446 + | putative L-asparaginase II CMS_2196 2323870 - 2320436 - | FtsK/SpoIIIE-related protein TERM 720 2321855 - 2321912 + g 86 -16.1 -3.61398 | gap 1 GCACCGCCCGGCGGG CGCGTCGGAGAGGCGGGC-CGCCTCGGC GGT GCCGAGGAGCGCCCGGCTGTCGGCCTCG TTGTTGACGCGGAGC CMS_2197 2326474 - 2323961 - | putative integral membrane protein CMS_2198 2328048 - 2326471 - | hypothetical protein CMS_2199 2329049 - 2328045 - | putative ATPase CMS_2200 2335139 - 2329116 - | putative large exported protein TERM 721 2331926 - 2331894 - G 70 -14.1 -3.2614 | CACGCCGTAGACGAA GCCGTAGCGCCCG GCCTGCT CGGGCGCGACGAC GCGGACGGTGTCGCC gltA 2338177 - 2336852 - | citrate synthase 1 CMS_2204 2339464 - 2338340 - | putative aminotransferase CMS_2205 2339790 - 2339470 - | ferredoxin CMS_2206 2341189 - 2339831 - | hypothetical protein CMS_2207 2341369 - 2342268 + | putative cation permease CMS_2208 2342339 - 2343556 + | putative lipoprotein TERM 722 2344601 - 2344571 - g 73 -18.2 -2.64616 | overlap 2344537 2344533 GCGGCACCGAGATGA CCGCGCCCGACTTC CAC GCCGTCGGGCGCGG GGGCGCACCGCTCAT CMS_2209 2343556 - 2344908 + | putative peroxidase CMS_2210 2345348 - 2344938 - | hypothetical protein CMS_2211 2347361 - 2345454 - | putative GTP-binding elongation factor CMS_2212 2349329 - 2347476 - | putative solute-binding transport protein CMS_2213 2351120 - 2349429 - | putative nucleotide-binding ABC transporter subunit TERM 723 2349851 - 2349900 + g 75 -12.7 -3.62046 | GGTTGCGGAAGCTGC GCGGCAGCTCCACCTGCTCGAGG AGCT CCTCGACCCGGTCGCTCTGCTGC TTCTTCGAGAACTGG CMS_2214 2351192 - 2351797 + | putative integral membrane protein CMS_2215 2352933 - 2351851 - | putative integral membrane transport protein CMS_2216 2354545 - 2353034 - | putative integral membrane transport protein TERM 724 2354656 - 2354710 + H 74 -16.3 -3.05816 | gap 1, opp_overlap 2354624 2354660 ATCACGAATCGGCAA CGGACATG-GAGAGGGTGCCGAGGCC AGGC GGCCTCGGCACCCTCGCACCCTCCCG TTCAATGGACGGTGC TERM 725 2354704 - 2354660 - H 73 -17.2 -2.53911 | gap 1, opp_overlap 2354656 CGAATCGGCAACGGA CATGGAGAGGGTGCCGAGGCC AGGC GGCCTCGGCACCCTCGC-ACC CTCCCGTTCAATGGA CMS_2219 2356871 - 2357686 + | putative integral membrane protein CMS_2220 2357794 - 2358201 + | putative integral membrane protein CMS_2221 2358198 - 2359820 + | putative integral membrane transport protein TERM 726 2359891 - 2359848 - T 100 -34 -2.87132 | CCGCGGCCGGAGACA CCGATGAGGGCGGCGGGACC ATTC GGTCCCGCCGCCCTCGTCGG TGCGTGCGTGGTGCG gcvP 2362896 - 2359921 - | glycine dehydrogenase TERM 727 2361517 - 2361459 - G 87 -22.4 -2.80816 | gap 1 CGGGGATCGAGGACA GGTCGCCGTGCGCGCCCTCGTCCTCCG CGAGCT CGGCGC-CGAAGGCGCGCGCGACGACC GCGAGGTCCTCGGGG gcvH 2363264 - 2362893 - | glycine cleavage system H protein gcvT 2364460 - 2363261 - | glycine cleavage system T protein TERM 728 2364564 - 2364585 + r 71 -6.6 -4.11216 | gap 1, overlap 2364568 GTGCTTTCACCGTGG GCGAGCCGT GCGGG ACGGCT-GC TTTTCAGAGTGGCCA CMS_2225 2365285 - 2364830 - | hypothetical protein CMS_2226 2365413 - 2365784 + | hypothetical protein TERM 729 2365821 - 2365860 + T 72 -14.2 -3.41002 | overlap 2365822 2365825 2365830 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 730 2365822 - 2365859 + T 73 -17.7 -2.63878 | overlap 2365821 2365825 2365830 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 731 2365825 - 2365856 + T 73 -18 -2.6072 | overlap 2365822 2365821 2365830 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 732 2365830 - 2365851 + T 71 -15.1 -3.10677 | overlap 2365825 2365822 2365821 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2227 2366770 - 2365808 - | putative insertion element IS1121 transposase CMS_2228 2367608 - 2366895 - | hypothetical protein CMS_2229 2368420 - 2367620 - | putative integral membrane protein CMS_2230 2369565 - 2368417 - | putative integral membrane protein CMS_2231 2369628 - 2370227 + | putative acetyl transferase TERM 733 2370409 - 2370463 + G 82 -18.6 -3.14211 | gap 1, opp_overlap 2370397 2370460 CCAGCTCGGGAGCAC CGCGTACGTCGCCGTCGAGCCGGCG ACCTGC CGCTGGCTCGGC-GCCATGAACGCG TTCGTCGCCGCGGAT CMS_2232 2370242 - 2370772 + | putative acetyltransferase TERM 734 2370756 - 2370785 + T 93 -22.1 -3.14564 | CCGGGGACACGCAGC GGGCCGCCGCGCC GTGA GGCGCGACGGCCC TTCATGGACGCCTCG CMS_2233 2371862 - 2370858 - | hypothetical protein TERM 735 2371509 - 2371496 - G 86 -8.1 -4.63218 | opp_overlap 2371496 CGCTGCGGAAGAAAA CCACC CCGA GGTGG TCGTTCGCCGAGAAT CMS_2234 2372070 - 2372933 + | putative secreted pectate lyase katA 2374542 - 2373013 - | catalase CMS_2236 2375110 - 2374619 - | putative ferric uptake regulation protein TERM 736 2375145 - 2375134 - H 71 -7.2 -4.18164 | AATCGTTCAAAACAA CGCG TGAA CGCG GCGCGTCGCGGACAG CMS_2237 2375217 - 2376206 + | putative oxidoreductase TERM 737 2376243 - 2376210 - f 91 -13.2 -4.39568 | overlap 2376211 ATCGACAGATGAAAA CCTCCGTGGTGATC TCCGGG GATCCCCACGGAGA CGCCGGTCGCGCCCC TERM 738 2376242 - 2376211 - f 70 -14.5 -3.23018 | overlap 2376210 TCGACAGATGAAAAC CTCCGTGGTGATC TCCGGG GATCCCCACGGAG ACGCCGGTCGCGCCC CMS_2238 2376352 - 2377896 + | hypothetical protein CMS_2239 2377893 - 2378924 + | hypothetical protein CMS_2240 2378911 - 2379918 + | putative oxidoreductase CMS_2241 2379915 - 2381177 + | radical SAM domain-containing protein CMS_2242 2381177 - 2382364 + | hypothetical protein CMS_2243 2382361 - 2383533 + | putative integral membrane transport protein CMS_2244 2384379 - 2383540 - | putative hydrolase CMS_2245 2384408 - 2385082 + | GntR family transcriptional regulator CMS_2246 2386587 - 2385190 - | putative integral membrane transport protein CMS_2247 2386753 - 2387436 + | hypothetical protein CMS_2248 2387532 - 2387924 + | hypothetical protein purQ 2387924 - 2388619 + | phosphoribosyl formylglycinamidine synthase I purL 2388616 - 2390979 + | phosphoribosyl formylglycinamidine synthase II CMS_2251 2390976 - 2391779 + | putative hydrolase TERM 739 2391798 - 2391829 + F 95 -24.4 -2.98823 | CTCCCCGCGTCCATC CGCGCGCCGCCGGC AGGA GCCTGCGGCGCGCG TGTCTGTCCGCGGGC CMS_2252 2392285 - 2393079 + | hypothetical protein TERM 740 2393694 - 2393657 - g 71 -10.5 -3.72324 | gap 1 GATCGGCACCAACAA CCGCATCGCGCAG-GTGC CGG ACACGCAGCTCGACGCGG ACATCCTGCAGACCG CMS_2253 2393280 - 2393996 + | putative lipoprotein CMS_2254 2394100 - 2395125 + | putative acetyl transferase CMS_2255 2397727 - 2395448 - | putative acyltransferase CMS_2256 2397966 - 2399378 + | putative polysaccharide biosynthesis protein ptpA 2399388 - 2400107 + | low molecular weight protein-tyrosine-phosphatase CMS_2258 2400319 - 2401674 + | putative initial glycosyl transferase CMS_2259 2401674 - 2402804 + | putative glycosyl transferase CMS_2260 2402801 - 2403850 + | putative glycosyl transferase wzx2 2403847 - 2405037 + | putative polysaccharide export protein CMS_2262 2405034 - 2406083 + | putative transferase TERM 741 2407612 - 2407573 - f 72 -14.2 -3.41002 | overlap 2407574 2407577 2407582 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 742 2407611 - 2407574 - f 73 -17.7 -2.63878 | overlap 2407573 2407577 2407582 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 743 2407608 - 2407577 - f 73 -18 -2.6072 | overlap 2407574 2407573 2407582 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 744 2407603 - 2407582 - f 71 -15.1 -3.10677 | overlap 2407577 2407574 2407573 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC TERM 745 2408729 - 2408682 - f 70 -17 -2.78384 | CCCTGCCCGACGAGA CCGCGCCGGCCGCCG-TGCGCG AGCAGG CGCTCATCGGC-GCCGGCGCCG CCGGGCTCGGTGCCG CMS_2266 2408845 - 2410743 + | hypothetical protein CMS_2267 2410899 - 2411483 + | hypothetical protein CMS_2268 2411551 - 2412372 + | hypothetical protein CMS_2269 2412488 - 2413471 + | hypothetical protein CMS_2270 2415051 - 2413681 - | putative integral membrane efflux protein CMS_2270b 2415590 - 2415048 - | putative adenine phosphoribosyltransferase CMS_2275 2416279 - 2415587 - | putative sugar-phosphate epimerase CMS_2276 2417259 - 2416276 - | putative sugar-phosphate pyrophosphokinase CMS_2278 2417888 - 2417256 - | hypothetical protein CMS_2281 2420119 - 2419736 - | putative chorismate mutase TERM 746 2420155 - 2420183 + r 100 -27.5 -2.80935 | CGCCTGGACGACGGA GGCGGGCGTCCCC GAT GGGGACGCCCGCC TCTGCTCGCTCGGGT CMS_2282 2420621 - 2420202 - | putative stress induced protein TERM 747 2420376 - 2420399 + g 70 -16 -2.55351 | overlap 2420375 2420378 2420390 GTTGTCGCCGATGGA GACGCTGGCG GAGA CGCCGGCGTC CTTCGTGTCGACGCC TERM 748 2420390 - 2420418 + g 79 -14.6 -3.61398 | overlap 2420378 2420376 2420375 AGACGCTGGCGGAGA CGCCGGCGTC CTTCGTGTC GACGCCGGCG TTCTTGCCGACGAGG CMS_2283 2421491 - 2420793 - | putative two component system response regulator CMS_2284 2422924 - 2421488 - | putative two-component system sensor kinase CMS_2285 2424999 - 2422966 - | putative beta-lactamase CMS_2286 2425610 - 2425218 - | putative resistance protein CMS_2287 2425879 - 2425607 - | hypothetical protein CMS_2288 2426167 - 2426661 + | hypothetical protein CMS_2289 2427360 - 2426716 - | putative acetyl transferase TERM 749 2427459 - 2427498 + r 72 -14.2 -3.41002 | overlap 2427460 2427463 2427468 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 750 2427460 - 2427497 + r 73 -17.7 -2.63878 | overlap 2427459 2427463 2427468 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 751 2427463 - 2427494 + r 73 -18 -2.6072 | overlap 2427460 2427459 2427468 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 752 2427468 - 2427489 + r 71 -15.1 -3.10677 | overlap 2427463 2427460 2427459 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2290 2428408 - 2427446 - | putative insertion element IS1121 transposase CMS_2291 2429276 - 2428506 - | putative sortase-sorted copper resistance surface protein sufS 2429379 - 2430686 + | cysteine desulfurase CMS_2293 2430683 - 2431126 + | NifU-like protein CMS_2294 2431227 - 2431622 + | hypothetical protein CMS_2295 2432202 - 2431648 - | putative acetyl tranferase CMS_2296 2432320 - 2433369 + | hypothetical protein CMS_2297 2433949 - 2433386 - | hypothetical protein CMS_2298 2434413 - 2434009 - | hypothetical protein CMS_2299 2434630 - 2435052 + | hypothetical protein CMS_2300 2435128 - 2436594 + | putative amino acid permease CMS_2301 2436597 - 2437052 + | putative stress protein CMS_2302 2437259 - 2438221 + | hypothetical protein TERM 753 2438305 - 2438353 + F 73 -15.4 -3.18383 | gap 1, opp_overlap 2438305 TGGGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_2303 2438357 - 2439319 + | putative insertion element ISCmi2 transposase CMS_2304 2440274 - 2439360 - | putative integral membrane protein TERM 754 2439906 - 2439870 - G 71 -15.8 -3.15861 | gap 1 CAGGAGCCCGACGAA GGCGAGCGCG-ACGCCC ACGA GGGCGAGCGCGCTCGGC CGCTTCCGGAACGCC ispE 2441231 - 2440293 - | 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase CMS_2306 2442159 - 2441242 - | putative dimethyladenosine transferase (drug resistance) CMS_2307 2443139 - 2442156 - | putative deoxyribonuclease metG 2444764 - 2443178 - | putative methionyl tRNA synthetase CMS_2309 2445076 - 2444888 - | hypothetical protein TERM 755 2444981 - 2445011 + g 70 -14.6 -3.21416 | opp_overlap 2444983, overlap 2444982 GAGGAGCGCAGCGAC AAGCCCCGCCGGGA TCG TCTCGGCGGGGCGC TTGATCGTGACGCTG TERM 756 2444982 - 2445010 + g 73 -18.1 -2.52635 | opp_overlap 2444983, overlap 2444981 AGGAGCGCAGCGACA AGCCCCGCCGGGA TCG TCTCGGCGGGGCG CTTGATCGTGACGCT TERM 757 2445009 - 2444983 - G 86 -19.4 -3.36327 | opp_overlap 2444982 2444981 GGAGCGCAGCGACAA GCCCCGCCGGGA TCG TCTCGGCGGGGC GCTTGATCGTGACGC CMS_2310 2445224 - 2445406 + | hypothetical protein CMS_2311 2446198 - 2445449 - | hypothetical protein CMS_2312 2447669 - 2446518 - | 2-methylcitrate synthase CMS_2313 2447928 - 2449391 + | putative oxidoreductase CMS_2315 2450486 - 2450052 - | putative integral membrane protein CMS_2316 2450980 - 2450483 - | putative lipoprotein TERM 758 2451495 - 2451535 + G 73 -17.5 -2.62735 | CGCCCTCCCGCTGAC GGTCACCGTCGCCGCGC TGCCTGC GCGCGGCGGCGCCGACC TCGTGTGCGACCTGT CMS_2317 2451136 - 2452539 + | hypothetical protein CMS_2318 2452536 - 2455121 + | putative phosphatase CMS_2319 2456254 - 2455340 - | putative methylisocitrate lyase CMS_2320 2457804 - 2456254 - | 2-methylcitrate dehydratase CMS_2321 2457906 - 2458844 + | putative acetyl transferase CMS_2322 2458879 - 2459406 + | putative integral membrane protein CMS_2323 2459874 - 2461412 + | hypothetical protein CMS_2324 2461409 - 2462065 + | hypothetical protein CMS_2325 2462128 - 2463231 + | putative integral membrane protein CMS_2326 2464152 - 2463238 - | putative integral membrane protein CMS_2327 2464316 - 2464849 + | hypothetical protein TERM 759 2464894 - 2464942 + F 73 -15.4 -3.18383 | gap 1, opp_overlap 2464894 GGGGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_2328 2464946 - 2465908 + | putative insertion element ISCmi2 transposase CMS_2329 2466736 - 2465921 - | putative methyltransferase CMS_2330 2467059 - 2466802 - | hypothetical protein CMS_2332 2467488 - 2468108 + | putative integral membrane protein CMS_2333 2468285 - 2470531 + | hypothetical protein CMS_2334 2470901 - 2470572 - | hypothetical protein CMS_2335 2471455 - 2470901 - | hypothetical protein TERM 760 2473307 - 2473322 + G 71 -10.4 -3.7941 | GGTCCTCGTCGTGTG CGCGCT CGTC AGCGCG TTCTTCTACCCGCTC CMS_2336 2471682 - 2473406 + | putative glycosyl transferase CMS_2337 2473406 - 2474410 + | putative integral membrane protein CMS_2338 2474910 - 2474539 - | hypothetical protein CMS_2339 2475694 - 2474987 - | putative transcriptional regulator cysD 2475851 - 2477902 + | O-acetylhomoserine (thiol)-lyase TERM 761 2477926 - 2477965 + T 72 -14.2 -3.41002 | overlap 2477927 2477930 2477935 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 762 2477927 - 2477964 + T 73 -17.7 -2.63878 | overlap 2477926 2477930 2477935 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 763 2477930 - 2477961 + T 73 -18 -2.6072 | overlap 2477927 2477926 2477935 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 764 2477935 - 2477956 + T 71 -15.1 -3.10677 | overlap 2477930 2477927 2477926 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2341 2478875 - 2477913 - | putative insertion element IS1121 transposase CMS_2342 2479532 - 2479023 - | hypothetical protein CMS_2343 2479717 - 2479977 + | putative integral membrane protein TERM 765 2479993 - 2480037 + F 100 -30.8 -3.12668 | TCCTTCCTGCATCGC GGAGCCCCCGTCGCCCGACC CACGC GGTCCGGCGGCGGGGGCTCC TTGCATGTCGGACTC CMS_2344 2480038 - 2480790 + | putative integral membrane protein sdaA 2480800 - 2482167 + | L-serine dehydratase CMS_2346 2482205 - 2482603 + | putative integral membrane protein TERM 766 2482655 - 2482694 + T 72 -14.2 -3.41002 | overlap 2482656 2482659 2482664 AGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 767 2482656 - 2482693 + T 73 -17.7 -2.63878 | overlap 2482655 2482659 2482664 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 768 2482659 - 2482690 + T 73 -18 -2.6072 | overlap 2482656 2482655 2482664 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 769 2482664 - 2482685 + T 71 -15.1 -3.10677 | overlap 2482659 2482656 2482655 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2347 2483604 - 2482642 - | putative insertion element IS1121 transposase CMS_2348 2484808 - 2483702 - | hypothetical protein CMS_2349 2485599 - 2484805 - | IclR family transcriptional regulator CMS_2350 2486402 - 2485593 - | hypothetical protein CMS_2351 2486513 - 2487862 + | putative substrate-binding lipoprotein CMS_2352 2487859 - 2488821 + | putative inregral membrane transport CMS_2353 2488818 - 2489723 + | putative integral membrane transport protein gudD 2489728 - 2490960 + | putative glucarate dehydratase CMS_2355 2490960 - 2491904 + | 5-dehydro-4-deoxyglucarate dehydratase TERM 770 2491954 - 2492002 + F 73 -15.4 -3.18383 | gap 1, opp_overlap 2491954 TGGGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_2356 2492006 - 2492968 + | putative insertion element ISCmi2 transposase CMS_2357 2494896 - 2492965 - | hypothetical protein CMS_2358 2496102 - 2494936 - | putative cation transport protein CMS_2360 2498595 - 2496997 - | putative long-chain-fatty-acid-CoA ligase CMS_2361 2498720 - 2502538 + | ATP-dependent helicase CMS_2362 2502757 - 2504463 + | putative integral membrane protein CMS_2363 2504460 - 2505263 + | GntR family transcriptional regulator TERM 771 2508489 - 2508514 + G 74 -8.9 -4.15222 | CGCCGGCGGGCGTTC CGCGACGGCCA CCCG TGGCTGCTGCG TTTCTTCGACCGGAT CMS_2364 2505363 - 2508992 + | urea carboxylase TERM 772 2510626 - 2510585 - g 73 -17.2 -2.62263 | gap 1 ACGCGCTCGACACGA CGCCGCCCAAG-CCGGGGC TCGTC GCCACGGACACGGGCGGCG CGAGTATCACCGGGG CMS_2365 2509054 - 2510835 + | allophanate hydrolase CMS_2366 2510841 - 2511320 + | putative ATP-binding protein CMS_2367 2512173 - 2511328 - | putative sulfurtransferase CMS_2368 2512687 - 2512202 - | putative acetyltransferase nrdB 2513864 - 2512869 - | ribonucleoside-diphosphate reductase beta subunit nrdA 2516533 - 2514029 - | ribonucleoside-diphosphate reductase alpha subunit TERM 773 2516694 - 2516637 - H 100 -46.1 -3.63515 | opp_overlap 2516653 2516655, overlap 2516681 TTCCACTGCGAAGAA TGGGGGCCCCGACATATAGTGGCCTTC GGCT GAAGGCCACTATATGTCGGGGCCCCCA GACACGCCAACCACC TERM 774 2516653 - 2516678 + H 72 -16.3 -2.87132 | opp_overlap 2516637, overlap 2516655 GGGGGCCCCGACATA TAGTGGCCTTC GGCT GAAGGCCACTA TATGTCGGGGCCCCC TERM 775 2516922 - 2516889 - H 84 -15.3 -3.78778 | opp_overlap 2516888 2516887 2516885 CCAGGACACGAAGAA GGCCCGGACCGATCC GGCT AGATCGATTCGGGCC CGTGTTCTTGAGGGA TERM 776 2516967 - 2517006 + H 84 -20.8 -2.73468 | opp_overlap 2516967 2516966 CTTCTTCGAGACAAC CGTCGTGCTGGGGTGCGC CTTG GCGTACCTCAGCGTGACG TACTTGCCGGTCTTA TERM 777 2517924 - 2517963 + G 76 -11.2 -4.08706 | gap 1, opp_overlap 2517914, overlap 2517906 CACGAGCGCCGGGAT CCTCGTCGCCGCGGCCTTC CTC GTCGGCGGCGGCG-CGTGG TTTATCTCCTCCCCC CMS_2373 2517412 - 2518623 + | putative integral membrane transport protein CMS_2374 2518722 - 2519201 + | hypothetical protein CMS_2375 2520262 - 2519270 - | putative oxidoreductase CMS_2376 2520562 - 2520272 - | hypothetical protein CMS_2377 2521421 - 2522599 + | putative protease CMS_2378 2523964 - 2522672 - | putative insertion element ISCmi3 transposase TERM 778 2522700 - 2522727 + g 100 -19.2 -4.21194 | opp_overlap 2522694 2522691 AGTAGAGCACGCATT CGCTCGGCTGGG GTGT CCCAGTCGAGCG TTTTGCGTGGTCGGC TERM 779 2524086 - 2524039 - R 100 -22.8 -3.6215 | opp_overlap 2524056, overlap 2524040 2524042 GCAACTCACCCGAAA CCACGATCCCCGCAACCCCCTG AACT CAGGGTGTTGCGGGGACCACGA GAATCCGCCATCGCG TERM 780 2524085 - 2524040 - R 89 -24.1 -2.76969 | opp_overlap 2524056, overlap 2524039 2524042 CAACTCACCCGAAAC CACGATCCCCGCAACCCCCTG AACT CAGGGTGTTGCGGGGACCACG AGAATCCGCCATCGC TERM 781 2524083 - 2524042 - R 91 -23.1 -2.92792 | opp_overlap 2524056, overlap 2524040 2524039 ACTCACCCGAAACCA CGATCCCCGCAACCCCCTG AACT CAGGGTGTTGCGGGGACCA CGAGAATCCGCCATC CMS_2380 2524964 - 2524314 - | GntR family transcriptional regulator tpiA 2525834 - 2525055 - | triosephosphate isomerase CMS_2382 2526318 - 2525857 - | putative sugar-phosphate isomerase CMS_2383 2528018 - 2526369 - | putative glycerone kinase TERM 782 2528236 - 2528192 - R 100 -27.1 -2.62184 | opp_overlap 2528202 GTCGCCCGGACACGA CGGAGCCCGGGCCGACGCGGG GGT CGCGCGTCGTCCCGGGCTCCT CCCGCGGCGGCTTTC TERM 783 2528202 - 2528247 + r 77 -15.2 -3.53761 | opp_overlap 2528192 CACGACGGAGCCCGG GCCGACGCGGGGGTCGCGCG TCGTCC CGGGCTCCTCCCGCGGCGGC TTTCGGGCCCGCTTC CMS_2385 2529185 - 2528424 - | GntR family transcriptional regulator CMS_2386 2530162 - 2529239 - | ABC transporter ATP-binding protein CMS_2387 2531202 - 2530159 - | putative ABC transporter permease TERM 784 2530804 - 2530774 - G 79 -14 -3.63515 | opp_overlap 2530768 CGCGAGCGCGAAGAA CGTGCCGAGCGTCA CGA TGAAGCTCGGCAGG CCCGTCTTCATCACC TERM 785 2531287 - 2531251 - R 89 -23.7 -2.87132 | opp_overlap 2531243 GTGCGGTGGGAGAGA GGGCGGGCCGGGCGC GACGGGT GCGCCCGGCCCGGCC GCCTAGCTGTACTGG TERM 786 2531317 - 2531356 + r 72 -14.2 -3.41002 | overlap 2531318 2531321 2531326 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 787 2531318 - 2531355 + r 73 -17.7 -2.63878 | overlap 2531317 2531321 2531326 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 788 2531321 - 2531352 + r 73 -18 -2.6072 | overlap 2531318 2531317 2531326 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 789 2531326 - 2531347 + r 71 -15.1 -3.10677 | overlap 2531321 2531318 2531317 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2388 2532266 - 2531304 - | putative insertion element IS1121 transposase CMS_2389 2533974 - 2532364 - | putative surface polysaccharide transport protein kanE 2535286 - 2534237 - | putative glycosyl transferase CMS_2391 2535445 - 2537388 + | glycosyl transferase CMS_2392 2537603 - 2538265 + | hypothetical protein CMS_2393 2539616 - 2538390 - | putative ATP-binding protein CMS_2394 2539813 - 2540316 + | putative DNA-binding membrane protein apt 2540415 - 2540954 + | adenine phosphoribosyltransferase CMS_2396 2541026 - 2541676 + | MerR family transcriptional regulator CMS_2397 2541673 - 2542419 + | hypothetical protein CMS_2398 2542416 - 2542682 + | hypothetical protein CMS_2399 2544036 - 2542672 - | putative surface polysaccharide biosynthesis protein CMS_2400 2545403 - 2544033 - | putative integral membrane protein TERM 790 2545588 - 2545627 + r 72 -14.2 -3.41002 | overlap 2545589 2545592 2545597 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 791 2545589 - 2545626 + r 73 -17.7 -2.63878 | overlap 2545588 2545592 2545597 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 792 2545592 - 2545623 + r 73 -18 -2.6072 | overlap 2545589 2545588 2545597 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 793 2545597 - 2545618 + r 71 -15.1 -3.10677 | overlap 2545592 2545589 2545588 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2401 2546537 - 2545575 - | putative insertion element IS1121 transposase TERM 794 2546678 - 2546726 + H 73 -15.4 -3.18383 | gap 1, opp_overlap 2546678 GGGGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_2403 2547403 - 2548809 + | putative amino acid permease CMS_2404 2548854 - 2549546 + | putative phosphatase CMS_2405 2549612 - 2550127 + | hypothetical protein CMS_2406 2550124 - 2550894 + | hypothetical protein TERM 795 2551476 - 2551464 - g 75 -4.1 -4.56775 | opp_overlap 2551455, overlap 2551465 ATGGCGTTGGAAAAA CCAAG TTT CTTGA GCTCATCAACGCCGC CMS_2408 2551352 - 2552689 + | putative ATP-binding protein TERM 796 2552817 - 2552849 + G 70 -13.5 -3.33696 | opp_overlap 2552848 GTCCTGCAGGCCGAT GTTGACCTTGTCGTA GAA TACGGCAAGGACAGC TTACTTGAGGCCAGC CMS_2409 2552682 - 2553485 + | hypothetical protein CMS_2410 2554658 - 2553585 - | putative ATP/GTP binding protein CMS_2411 2554738 - 2555388 + | putative exonuclease rmuC 2555477 - 2556856 + | putative DNA recombination protein fba 2556962 - 2557987 + | fructose-bisphosphate aldolase TERM 797 2558052 - 2558001 - T 100 -31.6 -3.14211 | opp_overlap 2558045 AGCCCGCGGCAGCAA GGCCAACGACGGCGGGGCCGGTCC ACCA GGACCGGCCCCGCCGTCGTGCGTC AGATGCCGCGCGTCA CMS_2414 2558916 - 2558065 - | hypothetical protein TERM 798 2558532 - 2558581 + g 73 -9.7 -4.07568 | gap 1, overlap 2558524 2558534 2558562 TGGGATCCGACGCCG GCGCGGAGCCAGGCGAGCGGCGCG CGC CTCGGCGCTCGGC-GGCCGCGCTC TTTTCCGCGACGCGA ispH 2559974 - 2558913 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase xseA 2560050 - 2561366 + | putative exoribonuclease large subunit xseB 2561377 - 2561619 + | exodeoxyribonuclease small subunit CMS_2418 2561622 - 2562335 + | hypothetical protein CMS_2419 2562332 - 2562994 + | putative carbonic anhydrase fumC 2563079 - 2564506 + | fumarate hydratase class II CMS_2422 2566232 - 2564865 - | putative ATP-binding protein uppS 2567221 - 2566436 - | putative undecaprenyl pyrophosphate synthetase CMS_2424 2567303 - 2568058 + | putative integral membrane protein CMS_2425 2569398 - 2568082 - | putative substrate-binding transport protein TERM 799 2568682 - 2568654 - G 71 -15.9 -3.05844 | TCTTCGAGTCGAAGA CGAGGCCGCGCGC GTA GCGGGCCGCCTCG AGCGTCTCCGGCTGG TERM 800 2568789 - 2568817 + g 73 -15.2 -3.23216 | TGGATCCCTGCGGCA GGCGGACGGCGG GCGTG CCGCCGGTCGCC TTCATGATGGTGGGC CMS_2426 2570361 - 2569531 - | putative integral membrane transport protein CMS_2427 2571431 - 2570442 - | putative integral membrane transport protein CMS_2429 2572199 - 2571849 - | hypothetical protein CMS_2430 2573122 - 2572196 - | hypothetical protein CMS_2431 2573144 - 2573626 + | hypothetical protein TERM 801 2573826 - 2573796 - g 72 -14 -3.40052 | overlap 2573794 AGATCGCGAAGAAGA TCGAGATCGCCCGC GAG GAGGGCGACCTCAA GGAGAACGGCGGCTA CMS_2432 2573687 - 2574175 + | putative transcription elongation factor TERM 802 2574191 - 2574235 + T 100 -31 -3.4072 | gap 1, opp_overlap 2574199, overlap 2574195 GGCACGACGTCATCA CGACGAGAGGGGACGCGGACC GCAT GGTCCGCGTCCCCTCTC-TCG TTCTCCTGCGGCGTG TERM 803 2574195 - 2574232 + T 100 -31.5 -2.86271 | opp_overlap 2574199, overlap 2574191 CGACGTCATCACGAC GAGAGGGGACGCGGACC GCAT GGTCCGCGTCCCCTCTC TCGTTCTCCTGCGGC TERM 804 2574228 - 2574199 - T 93 -25.1 -2.83715 | opp_overlap 2574195 2574191 GTCATCACGACGAGA GGGGACGCGGACC GCAT GGTCCGCGTCCCC TCTCTCGTTCTCCTG CMS_2433 2575636 - 2574260 - | putative amino acid dehydratase CMS_2434 2576868 - 2575633 - | putative integral membrane protein CMS_2435 2576991 - 2578205 + | hypothetical protein CMS_2436 2578202 - 2578657 + | hypothetical protein CMS_2437 2579234 - 2578668 - | hypothetical protein CMS_2438 2580712 - 2579342 - | putative glycoside hydrolase CMS_2439 2580853 - 2583144 + | putative integral membrane protein CMS_2440 2583277 - 2584719 + | putative amino acid transport protein TERM 805 2584791 - 2584756 - T 100 -32 -2.82516 | GCCCGCATGACGACA GGGGCGCCGCCCACCT CGCG AGGTGGGCGGCGCCCC TGCTGCATGTCGCCT CMS_2441 2585753 - 2584812 - | hypothetical protein CMS_2442 2588572 - 2585939 - | hypothetical protein CMS_2443 2589006 - 2588572 - | putative anti-sigma factor CMS_2444 2589349 - 2589011 - | putative anti-sigma factor antagonist CMS_2445 2591337 - 2589346 - | putative polysaccharide synthase TERM 806 2591326 - 2591281 - G 71 -15.3 -3.15861 | gap 1 CAGGAGCCGGATGAA CGCGAACCGCAGCGGCGACCTC CCC GTGGTCGGTGC-GCGGTGCGCG TTGCGGCTCATCCGC CMS_2446 2592569 - 2591334 - | hypothetical protein CMS_2447 2592776 - 2593861 + | putative acetyl transferase CMS_2448 2594588 - 2594277 - | hypothetical protein CMS_2449 2594787 - 2595050 + | hypothetical protein CMS_2450 2595457 - 2595032 - | hypothetical protein CMS_2451 2595939 - 2595454 - | putative prophage protein CMS_2452 2597985 - 2596498 - | putative dehydrogenase TERM 807 2596944 - 2596969 + g 79 -14.7 -3.63515 | AGTAGTCGGTGACGC CCTCGCCGCGG AGGC TCGCGGTGAGG TTCTTCGCCATGAGC CMS_2453 2599258 - 2598023 - | putative sortase-sorted serine protease CMS_2454 2599848 - 2599333 - | hypothetical protein CMS_2455 2600402 - 2599845 - | hypothetical protein eno 2601772 - 2600492 - | enolase hisS 2603196 - 2601889 - | histidyl-tRNA synthetase CMS_2458 2603844 - 2603209 - | hypothetical protein CMS_2459 2604706 - 2603999 - | putative hydrolase CMS_2460 2604841 - 2606136 + | putative sodium/proton antiporter CMS_2461 2606302 - 2607402 + | putative integral membrane protein TERM 808 2607468 - 2607437 - T 73 -2.9 -4.49311 | gap 1, overlap 2607438 2607440 2607441 ACTATGACGACAAAA GGAGGGATCACGCC TTGGG GGCG-GACTCCTTC GCGGCCGGCGCCGGC mfd 2611076 - 2607444 - | transcription-repair coupling factor pth 2611750 - 2611163 - | peptidyl-tRNA hydrolase rplY 2612547 - 2611903 - | 50S ribosomal protein L25 CMS_2465 2614739 - 2612718 - | putative multifunctional enzyme gnd 2614823 - 2616277 + | 6-phosphogluconate 1-dehydrogenase TERM 809 2616299 - 2616329 + F 100 -31.2 -2.88544 | opp_overlap 2616270 GCCGACCGTCGCCGA CGCCCCGCCGCCCG TCC CGGGCGGCGGGGCG TCTGTCACACTGGGG CMS_2467 2616348 - 2616722 + | hypothetical protein CMS_2468 2617089 - 2618171 + | hypothetical protein TERM 810 2618250 - 2618193 - T 79 -17.1 -3.37612 | overlap 2618195 2618198 2618249 GTCAACTCGAATCAA CAGCATCCGATGCAGATGGGTCGGCAC TCTC GTGCCGACCCATCTGCATGCAACAACG TCCTGGGACAGTCAG TERM 811 2618246 - 2618195 - T 84 -18.3 -3.25539 | gap 2, overlap 2618193 2618198 CAACTCGAATCAACA GCATCCGATGCAGATGGGTCGGCAC TCTC GTGCCGACCCATCTGCAT-GCA-AC AACGTCCTGGGACAG TERM 812 2618244 - 2618198 - T 89 -23.3 -2.80699 | gap 1, overlap 2618195 2618193 CTCGAATCAACAGCA TCCGATGCAGATGGGTCGGCAC TCTC GTGCCGACCCATCTGCAT-GCA ACAACGTCCTGGGAC prs 2619244 - 2618267 - | ribose-phosphate pyrophosphokinase glmU 2620759 - 2619278 - | bifunctional GlmU protein [includes: UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase); glucosamine-1-phosphate N-acetyltransferase CMS_2471 2622374 - 2620983 - | hypothetical protein CMS_2472 2622552 - 2623055 + | MarR family regulator CMS_2473 2623460 - 2623104 - | hypothetical protein CMS_2474 2624487 - 2623468 - | hypothetical protein CMS_2475 2625302 - 2624484 - | putative amino acid export protein CMS_2477 2626952 - 2626293 - | putative integral membrane amino acid transport protein CMS_2478 2627991 - 2626954 - | putative ABC transporter ATP-binding protein TERM 813 2627942 - 2628000 + g 88 -7.9 -4.82901 | gap 1, overlap 2627942 CCCTTCGCGCGCGGC GG-GTACTGCTTGCCGACGCCCCGCAGG GAGA CGTGCGGGGCGTCCGTCATCGGGCCGCC TTTTTCTCGGCGACG CMS_2479 2628920 - 2627988 - | putative lipoprotein CMS_2480 2629238 - 2630167 + | hypothetical protein CMS_2481 2630226 - 2631074 + | hypothetical protein CMS_2482 2632884 - 2631109 - | putative ABC transporter ATP-binding protein TERM 814 2632202 - 2632231 + g 74 -12.1 -3.73534 | gap 1 TTGGCCGTGCGCGCA GGGGCTC-CGCGGC GCA GCCACGCGAGCTCC TTCTTCATCAGGTTC CMS_2483 2633085 - 2634377 + | putative drug efflux protein CMS_2483A 2634530 - 2634700 + | hypothetical protein CMS_2484 2635377 - 2634697 - | putative ABC transporter ATP-binding protein CMS_2485 2637650 - 2635377 - | putative integral membrane protein CMS_2486 2638002 - 2637682 - | hypothetical protein moaE 2638541 - 2638125 - | molybdopterin converting factor subunit mog 2639107 - 2638553 - | molybdopterin biosynthesis protein Mog moaC 2639646 - 2639104 - | molybdenum cofactor biosynthesis protein C moeA 2640931 - 2639639 - | molybdopterin biosynthesis protein MoeA CMS_2491 2641059 - 2641274 + | hypothetical protein TERM 815 2641804 - 2641790 - g 79 -5.6 -4.51196 | opp_overlap 2641800, overlap 2641792 CTTAAAGGCAGAAAA GACGAC AGT GGCGTC GCAGGAGCATGCAAT CMS_2492 2641329 - 2642075 + | putative integral membrane protein CMS_2493 2642157 - 2642930 + | putative transferase CMS_2494 2644092 - 2642965 - | putative bile acid:sodium symporter CMS_2495 2645210 - 2644086 - | hypothetical protein CMS_2496 2645254 - 2646297 + | putative purine phosphorylase CMS_2497 2646294 - 2647358 + | putative epimerase/dehydratase CMS_2498 2647509 - 2647958 + | putative lipoprotein lvr 2648874 - 2648017 - | levodione reductase ((6r)-2,2,6-trimethyl-1,4-cyclohexanedione reductase) CMS_2500 2649896 - 2648883 - | putative integral membrane protein CMS_2501 2650469 - 2650002 - | hypothetical protein CMS_2502 2650721 - 2650539 - | hypothetical protein CMS_2503 2650852 - 2651943 + | hypothetical protein CMS_2504 2651940 - 2653031 + | hypothetical protein CMS_2505 2653497 - 2654390 + | putative integral membrane protein CMS_2506 2654497 - 2655255 + | hypothetical protein CMS_2507 2655263 - 2656654 + | hypothetical protein CMS_2508 2656889 - 2658094 + | putative monooxygenase CMS_2509A 2658344 - 2658174 - | hypothetical protein CMS_2509 2658483 - 2658821 + | hypothetical protein TERM 816 2658848 - 2658895 + T 100 -29.2 -3.41602 | GGATCCACCCCCGGA CGCGCCGACGGCCTCGGCTCCC CGGA GGGAGACGAGGCCGTCGATGCG TTCTGCTGCGATCGC CMS_2510 2659633 - 2658947 - | putative lipoprotein CMS_2511 2659899 - 2660582 + | PadR family transcriptional regulator TERM 817 2660652 - 2660623 - T 100 -26.5 -2.62184 | GCGCCCGGCAGACGA CGACGGCCCCCGC TCAC GCGGGGGCCGTCG TCGTGCACGCGGGCG CMS_2512 2660973 - 2660674 - | hypothetical protein CMS_2514 2663921 - 2662659 - | putative two-component system sensor kinase CMS_2515 2664676 - 2663918 - | putative two-component system response regulator CMS_2516 2664920 - 2665627 + | putative glycosyl transferase CMS_2517 2665624 - 2666307 + | hypothetical protein CMS_2519 2667451 - 2666948 - | putative integral membrane protein CMS_2518 2666304 - 2666999 + | hypothetical protein CMS_2520 2668686 - 2667448 - | putative integral membrane protein CMS_2521 2668765 - 2670213 + | putative integral membrane protein CMS_2522 2671305 - 2670214 - | putative ABC transporter ATP-binding subunit CMS_2523 2672081 - 2671302 - | putative integral membrane transport protein CMS_2524 2672943 - 2672155 - | putative substrate-binding transport protein CMS_2525 2673455 - 2672943 - | putative substrate binding transport regulator moaA 2673549 - 2674634 + | molybdenum cofactor biosynthesis protein A TERM 818 2674853 - 2674884 + G 73 -15.9 -3.29144 | gap 1 GCGACGCGCCCCTCA CGGCCGGCAGCGCG GTGGA CGTGCTGCCG-CCG TTCTCGGGCGGCTGA CMS_2527 2674636 - 2674899 + | putative molybdopterin converting factor CMS_2528 2675177 - 2676751 + | putative lambdoid prophage protein CMS_2529 2676751 - 2677572 + | putative lambdoid prophage protein CMS_2530 2678599 - 2678120 - | hypothetical protein CMS_2531 2679674 - 2678709 - | putative integral membrane protein CMS_2532 2680021 - 2679671 - | GntR family transcriptional regulator CMS_2533 2680980 - 2680069 - | LacI family transcriptional regulator CMS_2534 2683112 - 2681079 - | putative oxidoreductase TERM 819 2684061 - 2684037 - g 71 -14.9 -3.13403 | opp_overlap 2684051, overlap 2684035 GTCGGGTCACCAACA GCAGCGCCGCG GTG CGCGGGGCCGC GGGCGGCGCGTGGTT CMS_2535 2683226 - 2684335 + | hypothetical protein TERM 820 2684351 - 2684387 + T 89 -23.7 -2.62616 | opp_overlap 2684364 CCCGCGGCATCGCCA CGACGCGGACAGACGGC TCA GCCGCCCGTCCGCGTCG TCATGTCCGGGGTGC CMS_2536 2684999 - 2684388 - | hypothetical protein CMS_2537 2685171 - 2686442 + | hypothetical protein CMS_2538 2687655 - 2686468 - | putative sulfurylase CMS_2539 2687654 - 2689360 + | putative integral membrane protein CMS_2540 2690293 - 2689379 - | putative hydrolase CMS_2541 2690326 - 2690829 + | hypothetical protein CMS_2542 2690883 - 2691302 + | hypothetical protein TERM 821 2691347 - 2691395 + F 73 -15.4 -3.18383 | gap 1, opp_overlap 2691347 GGGGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_2543 2691399 - 2692361 + | putative insertion element ISCmi2 transposase CMS_2544 2692825 - 2692358 - | MarR family transcriptional regulator TERM 822 2692916 - 2692949 + r 80 -19.6 -2.52464 | opp_overlap 2692914 GCGCCGGACATGACT GAGGGCCGACCCCA GAGGCA TGGGGCCGGCCCTC TCCCTTGCACCAGGA CMS_2545 2693743 - 2693135 - | putative transcriptional regulator upp 2694952 - 2694305 - | uracil phosphoribosyltransferase tadA 2694976 - 2695452 + | tRNA-specific adenosine deaminase CMS_2549 2696933 - 2695941 - | putative cation transport protein proC 2697071 - 2697880 + | pyrroline-5-carboxylate reductase CMS_2551 2698597 - 2697929 - | hypothetical protein CMS_2552 2700075 - 2698651 - | putative cation transport protein CMS_2553 2700155 - 2700700 + | ArsR family transcriptional regulator xis 2700823 - 2701062 + | putative excisionase CMS_2555 2701137 - 2701235 + | hypothetical protein TERM 823 2701272 - 2701305 + T 100 -23.9 -3.18264 | opp_overlap 2701277 GCCGCACGCGATCGA GAGGACGCCGGCCCG GTGA CGGGGCGGCGTCCTC TTCGTGCGTCGAGGG CMS_2556 2702106 - 2701354 - | putative hydrolase CMS_2557 2702141 - 2702458 + | hypothetical protein CMS_2558 2702493 - 2702795 + | hypothetical protein CMS_2559 2702839 - 2703480 + | putative ABC transporter ATP-binding protein CMS_2560 2703477 - 2705003 + | putative integral membrane transport protein CMS_2561 2705245 - 2705030 - | hypothetical protein CMS_2562 2706374 - 2705322 - | fusion protein CMS_2563 2707596 - 2706367 - | putative transcriptional regulator aspS 2709097 - 2707781 - | aspartyl-tRNA synthetase CMS_2565 2709218 - 2710060 + | hypothetical protein CMS_2566 2710057 - 2710686 + | hypothetical protein CMS_2567 2710746 - 2711600 + | hypothetical protein CMS_2568 2712471 - 2711653 - | hypothetical protein uvrA 2715088 - 2712590 - | UvrABC system protein A (UvrA protein) (excinuclease ABC subunit A) CMS_2570 2715411 - 2715199 - | hypothetical protein CMS_2571 2717611 - 2715590 - | beta-galactosidase CMS_2574 2719316 - 2720203 + | putative integral membrane transport protein CMS_2575 2720207 - 2721109 + | putative integral membrane transport protein CMS_2576 2721135 - 2722151 + | LacI family transcriptional regulator TERM 824 2722181 - 2722215 + T 93 -24.3 -2.78384 | opp_overlap 2722161 2722184 GCGACCTCGTGCACA CGAGGGCCGCCCGCG ACGTG CGCGGACGGCCCTCG TGTCGTGCGGCGGGA TERM 825 2722212 - 2722184 - T 83 -21 -2.62263 | opp_overlap 2722181, overlap 2722161 ACCTCGTGCACACGA GGGCCGCCCGCG ACGTG CGCGGACGGCCC TCGTGTCGTGCGGCG hrdD 2723274 - 2722231 - | RNA polymerase principal sigma factor HrdD CMS_2578 2723630 - 2724235 + | putative phosphoglycerate mutase related enzyme CMS_2579 2724232 - 2724843 + | putative lipoprotein CMS_2580 2724844 - 2725584 + | putative cytochrome C biogenesis protein CMS_2581 2725568 - 2727214 + | putative integral membrane cytochrome synthesis protein CMS_2582 2727211 - 2728236 + | putative cytochrome biogenesis protein menC 2729259 - 2728276 - | O-succinylbenzoate synthase menB 2729314 - 2730225 + | naphthoate synthase menE 2730287 - 2731459 + | O-succinylbenzoate--CoA ligase CMS_2586 2731722 - 2731549 - | general stress response protein TERM 826 2732016 - 2732040 + G 82 -19.3 -3.14132 | CGTCGCGGGCGGCAT CGCGACCGTGG TGG CCGCGGTCGCG TTCGTCGACCAGCGC CMS_2587 2731855 - 2732163 + | hypothetical protein TERM 827 2733235 - 2733196 - g 72 -14.2 -3.41002 | overlap 2733197 2733200 2733205 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 828 2733234 - 2733197 - g 73 -17.7 -2.63878 | overlap 2733196 2733200 2733205 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 829 2733231 - 2733200 - g 73 -18 -2.6072 | overlap 2733197 2733196 2733205 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 830 2733226 - 2733205 - g 71 -15.1 -3.10677 | overlap 2733200 2733197 2733196 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_2588 2732286 - 2733248 + | putative insertion element IS1121 transposase CMS_2589 2735067 - 2733259 - | putative ABC transporter ATP-binding protein CMS_2590 2736836 - 2735064 - | putative ABC transporter ATP-binding protein TERM 831 2737482 - 2737447 - R 100 -30.6 -3.36327 | GCACCCCACGCACAA GAGCCCGGCCCGCATC CGAG GATGCGGGCCGGGCTC GTGCGGTTCGCGCGG CMS_2591 2738700 - 2737516 - | integral membrane NG,NG-dimethylarginine dimethylaminohydrolase TERM 832 2739049 - 2739087 + r 74 -14.4 -3.45832 | opp_overlap 2739051 2739055 GAGGCCGTGTTAACG CAGAAAGGCCCGCCGCAC GAT GTGCGACGGGCCTCCCCG TTCGTTCTCAAGTTA TERM 833 2739085 - 2739051 - R 86 -22.2 -2.52464 | opp_overlap 2739049, overlap 2739055 GGCCGTGTTAACGCA GAAAGGCCCGCCGCAC GAT GTGCGACGGGCCTCCC CGTTCGTTCTCAAGT TERM 834 2739081 - 2739055 - R 100 -21.6 -3.97368 | opp_overlap 2739049, overlap 2739051 GTGTTAACGCAGAAA GGCCCGCCGCAC GAT GTGCGACGGGCC TCCCCGTTCGTTCTC TERM 835 2742675 - 2742649 - R 71 -5.1 -4.30719 | gap 1, overlap 2742645 2742654 GGGTCCGACAAGAAA CCAGA-CACACC AAAA GGTGCGGCCCGG TCCCTCAGGACCCAA TERM 836 2744939 - 2744902 - R 100 -24.3 -4.08767 | gap 1, overlap 2744906 CCCACCCCCGCAAAA CCAACGACATCCCGGGCG TGT CGCCCGGGATGCCGT-GG TGGTGCGCGCAGAGG TERM 837 2744936 - 2744906 - R 100 -24.8 -3.66908 | overlap 2744902 CCCCCGCAAAACCAA CGACATCCCGGGCG TGT CGCCCGGGATGCCG TGGTGGTGCGCGCAG purH 2746583 - 2744958 - | bifunctional purine biosynthesis protein TERM 838 2745731 - 2745768 + g 77 -13.3 -3.7941 | CCGGCTCGGCGAAGT CGTAGGCGGCGCGGACG GCCG CGTCCGCGTCGACGAAG TTGTTGTAGGACATC purN 2747179 - 2746580 - | phosphoribosylglycinamide formyltransferase TERM 839 2747089 - 2747047 - G 74 -17.7 -2.73875 | gap 1, overlap 2747044 CCTCGGCGAAGACGA GCCCGTCGGCGTCGCGATCG GCTC CGACCGCGACGACC-CGGGC GGGGTAGTCCGCGTG CMS_2594 2748463 - 2747183 - | putative integral membrane protein sucD 2749512 - 2748625 - | succinyl CoA synthetase alpha chain sucC 2750711 - 2749539 - | succinyl-CoA synthetase beta chain CMS_2597 2750950 - 2751771 + | hypothetical protein CMS_2600 2755089 - 2752642 - | putative ATP-dependent DNA helicase TERM 840 2756365 - 2756326 - g 72 -14.2 -3.41002 | overlap 2756327 2756330 2756335 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 841 2756364 - 2756327 - g 73 -17.7 -2.63878 | overlap 2756326 2756330 2756335 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 842 2756361 - 2756330 - g 73 -18 -2.6072 | overlap 2756327 2756326 2756335 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 843 2756356 - 2756335 - g 71 -15.1 -3.10677 | overlap 2756330 2756327 2756326 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_2601 2755416 - 2756378 + | putative insertion element IS1121 transposase CMS_2602 2757255 - 2756422 - | hypothetical protein CMS_2603 2757303 - 2757623 + | hypothetical protein CMS_2604 2758544 - 2757648 - | lycopene elongase CMS_2605 2758905 - 2758537 - | c50 carotenoid epsilon cyclase CMS_2606 2759246 - 2758902 - | c50 carotenoid epsilon cyclase CMS_2607 2761891 - 2759246 - | bifunctional enzyme phytoene desaturase/synthetase CMS_2608 2762910 - 2761888 - | geranylgeranyl pyrophosphate synthase idi 2763003 - 2763575 + | isopentenyl-diphosphate delta-isomerase TERM 844 2763623 - 2763670 + F 100 -22.8 -3.6215 | opp_overlap 2763640, overlap 2763624 2763626 GCGGTGGGCGGATTC TCGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTGG TTTCGGGTGAGTTGC TERM 845 2763624 - 2763669 + F 89 -24.1 -2.76969 | opp_overlap 2763640, overlap 2763623 2763626 CGGTGGGCGGATTCT CGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTG GTTTCGGGTGAGTTG TERM 846 2763626 - 2763667 + F 91 -23.1 -2.92792 | opp_overlap 2763640, overlap 2763624 2763623 GTGGGCGGATTCTCG TGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCG TGGTTTCGGGTGAGT TERM 847 2765009 - 2764982 - g 100 -19.2 -4.21194 | opp_overlap 2764975 2764972 GCCGACCACGCAAAA CGCTCGACTGGG ACAC CCCAGCCGAGCG AATGCGTGCTCTACT CMS_2610 2763745 - 2765037 + | putative insertion element ISCmi3 transposase CMS_2611 2766846 - 2765107 - | alpha-glucosidase CMS_2612 2767007 - 2767945 + | putative oxidoreductase TERM 848 2767971 - 2768016 + F 76 -17.5 -2.85378 | gap 1, overlap 2767948 2767974 GCCGGCCGGCCGTGC CCCGGTCCGGGGCCGTCACGCG TCT CGTG-GGCGGTCCCGGACCTGC TATCGTCGTATGGTT TERM 849 2767974 - 2768013 + F 87 -22.2 -2.67992 | gap 1, overlap 2767948 2767971 GGCCGGCCGTGCCCC GGTCCGGGGCCGTCACGCG TCT CGTG-GGCGGTCCCGGACC TGCTATCGTCGTATG TERM 850 2768284 - 2768316 + F 86 -15.7 -3.83998 | gap 1 CCGTCCTCCTCGATA GGCCCCGGACACCT CTCGCC AGGT-TCCGGGGCC TTTCCTCTGCCCTCG CMS_2613 2768449 - 2768640 + | hypothetical protein CMS_2614 2769021 - 2769107 + | hypothetical protein CMS_2615 2769246 - 2769689 + | hypothetical protein CMS_2616 2769737 - 2770120 + | hypothetical protein murB 2770127 - 2771281 + | UDP-N-acetylenoylpyruvoylglucosamine reductase TERM 851 2771396 - 2771358 - T 72 -16.8 -2.87211 | gap 1, overlap 2771360 2771362 ACGCCCTCGCACATA GAGAGGCCC-ACCCGCC TTACCT GGCGAGTTGGGCCCCTC GCCGCATTATTTCCC aspC 2774484 - 2773267 - | aspartate aminotransferase secE 2774834 - 2775106 + | preprotein translocase SecE subunit nusG 2775292 - 2776329 + | transcription antitermination protein rplK 2776383 - 2776814 + | 50S ribosomal protein L11 rplA 2776914 - 2777600 + | 50S ribosomal protein L1 TERM 852 2777638 - 2777667 + F 77 -19.3 -2.70932 | opp_overlap 2777639 2777643, overlap 2777643 CACGACATGCAGCAC AGGAAGGGCCCGC TCCG GCGGGCCCTTCCG TCATTCCCGGGCCGC TERM 853 2777666 - 2777639 - f 87 -22.8 -2.82193 | opp_overlap 2777638 2777643, overlap 2777643 ACGACATGCAGCACA GGAAGGGCCCGC TCCG GCGGGCCCTTCC GTCATTCCCGGGCCG TERM 854 2777662 - 2777643 - f 77 -16.4 -3.29947 | opp_overlap 2777638 2777643, overlap 2777639 CATGCAGCACAGGAA GGGCCCGC TCCG GCGGGCCC TTCCGTCATTCCCGG TERM 855 2777643 - 2777662 + F 74 -16.4 -3.13164 | opp_overlap 2777643 2777639, overlap 2777638 CATGCAGCACAGGAA GGGCCCGC TCCG GCGGGCCC TTCCGTCATTCCCGG CMS_2626 2777753 - 2778304 + | putative acetyltransferase CMS_2627 2779272 - 2778316 - | putative zinc-binding oxidoreductase TERM 856 2779895 - 2779934 + r 72 -14.2 -3.41002 | overlap 2779896 2779899 2779904 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 857 2779896 - 2779933 + r 73 -17.7 -2.63878 | overlap 2779895 2779899 2779904 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 858 2779899 - 2779930 + r 73 -18 -2.6072 | overlap 2779896 2779895 2779904 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 859 2779904 - 2779925 + r 71 -15.1 -3.10677 | overlap 2779899 2779896 2779895 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2629 2780844 - 2779882 - | putative insertion element IS1121 transposase CMS_2631 2782734 - 2782003 - | hypothetical protein CMS_2632 2782987 - 2783790 + | hypothetical protein CMS_2635 2786124 - 2786891 + | hypothetical protein TERM 860 2786905 - 2786941 + T 100 -26.6 -2.91264 | GACGCCGCGCACGCC GGAGGGGCGGGCCGCC TCCTC GGCGACCCGCCCCTCC TCTGTCCCTCAGCGC CMS_2636 2788106 - 2786970 - | hypothetical protein TERM 861 2787853 - 2787838 - G 78 -6.8 -4.36914 | overlap 2787841 GTGCCCGTGACAAAA GCACCG TCGA CAGTGC CTGCCACACGGAAGC CMS_2637 2788141 - 2788578 + | hypothetical protein TERM 862 2788623 - 2788593 - T 77 -16.1 -3.25942 | gap 1, opp_overlap 2788590 2788587, overlap 2788594 ACCCGGGCACAGGAA CGGGGC-GGCGGCC ACAT GGCCGCCCGCCCCT CCTCGTCTTCCGCTA TERM 863 2788622 - 2788594 - T 81 -19.6 -2.55351 | gap 1, opp_overlap 2788590 2788587, overlap 2788593 CCCGGGCACAGGAAC GGGGC-GGCGGCC ACAT GGCCGCCCGCCCC TCCTCGTCTTCCGCT CMS_2638 2788968 - 2788690 - | hypothetical protein TERM 864 2789073 - 2789036 - H 76 -15.5 -3.3782 | GATGGATCCAATCAA CCACCCTGCGGGGTGTG ACGA CACACCCCTGGGGGTGG GATGGTGGATCCATG CMS_2639 2789050 - 2789754 + | putative two component response regulator CMS_2640 2789972 - 2789799 - | hypothetical protein CMS_2641 2790761 - 2789979 - | hypothetical protein TERM 865 2790514 - 2790480 - G 74 -16.5 -3.14132 | overlap 2790483 GTCCTTGCTCATGAA GGAGCCGACG-GGAGCG ACG CGCTCCTCGCCGGC-CC AGTCGTAGACGTCCT TERM 866 2790512 - 2790483 - G 74 -17.9 -2.77899 | gap 1, overlap 2790480 CTTGCTCATGAAGGA GCCGACG-GGAGCG ACG CGCTCCTCGCCGGC CCAGTCGTAGACGTC TERM 867 2791026 - 2790998 - H 73 -10.1 -3.87815 | overlap 2791002 TCTGAGTTCTACAAA CCTACCCGCGGGG TCT CCCCACGGGCCTG AGATCACCCCACCTT TERM 868 2791022 - 2791002 - H 70 -16.1 -2.70532 | overlap 2790998 AGTTCTACAAACCTA CCCGCGGGG TCT CCCCACGGG CCTGAGATCACCCCA CMS_2642 2791142 - 2792215 + | hypothetical protein CMS_2643 2792856 - 2792254 - | hypothetical protein TERM 869 2792873 - 2792889 + r 75 -3.5 -4.57353 | GCATCCAGATATGGA GCGCCGG CCT CCTGAGC TTTTCTGTAATAGCC CMS_2644 2793647 - 2792928 - | hypothetical protein TERM 870 2793657 - 2793670 + r 93 -2.3 -5.42259 | opp_overlap 2793654, overlap 2793654 2793651 TGCCACAAAGACCGG GAGAC TCGC GTCAC TTTTTTTAGAGCTCG CMS_2645 2794111 - 2793638 - | hypothetical protein TERM 871 2793985 - 2793953 - G 77 -2.5 -4.73388 | AAGCTGCACCAAAAA GTGCATGCCGGTGGC GAA GCCAGCTTCAAACAC CTCGATATCCCCATC CMS_2646 2795296 - 2794238 - | putative glycosyltransferase CMS_2647 2796023 - 2795358 - | putative integral membrane protein CMS_2648 2796662 - 2796387 - | hypothetical protein TERM 872 2796683 - 2796650 - G 100 -22.5 -3.53091 | overlap 2796651 ACGCGCTCGCGCAAA CGGACGTGCCCACGG TCTC CCGTGGGCACGTCCT GAGCTCACCGCCGCA TERM 873 2796682 - 2796651 - G 100 -26 -2.71712 | overlap 2796650 CGCGCTCGCGCAAAC GGACGTGCCCACGG TCTC CCGTGGGCACGTCC TGAGCTCACCGCCGC CMS_2649 2797649 - 2796702 - | hypothetical protein CMS_2650 2797882 - 2797646 - | hypothetical protein CMS_2651 2797928 - 2798398 + | MarR family transcriptional regulator doc 2799304 - 2798462 - | putative death on curing protein CMS_2654 2799680 - 2800525 + | hypothetical protein CMS_2655 2800519 - 2801196 + | putative integral membrane protein CMS_2656 2801771 - 2801157 - | hypothetical protein TERM 874 2801720 - 2801700 - G 70 -2.5 -4.36914 | overlap 2801702 2801704 TTCGCCCTCACAAAA TAGAGCTAT CAC ATAGCGCTC CGGCTTGGAGGGTCG CMS_2657 2803054 - 2801771 - | hypothetical protein TERM 875 2803090 - 2803101 + H 73 -2.2 -4.56597 | overlap 2803089 GCGCCGATCCTAGCG CTGT TTCC GCAG TTTTTCGACGAAAAC CMS_2658 2803273 - 2804889 + | putative glycosyl transferase CMS_2659 2804886 - 2805989 + | putative glycosyl transferase CMS_2660 2805986 - 2807899 + | putative glycosyl transferase/isomerase CMS_2661 2807896 - 2809278 + | putative bifunctional kinase/glycosyl transferase CMS_2662 2809433 - 2810026 + | putative short chain oxidoreductase TERM 876 2810093 - 2810058 - f 79 -19 -2.79796 | gap 1, opp_overlap 2810059, overlap 2810061 GCCCAGCGCATGAGA CGAGCCCGG-CCCCGCA TCG CGCGGGGGCCGGGCTCT TTTTCGTTAGCCACG TERM 877 2810059 - 2810092 + F 100 -21.8 -4.8622 | gap 1, opp_overlap 2810058 2810061 CCCAGCGCATGAGAC GAGCCCGG-CCCCGC ATCGC GCGGGGGCCGGGCTC TTTTTCGTTAGCCAC TERM 878 2810090 - 2810061 - f 77 -19.3 -2.66634 | gap 1, opp_overlap 2810059, overlap 2810058 CAGCGCATGAGACGA GCCCGG-CCCCGCA TCG CGCGGGGGCCGGGC TCTTTTTCGTTAGCC CMS_2663 2810242 - 2811723 + | hypothetical protein TERM 879 2811833 - 2811867 + T 100 -30.1 -2.8547 | CCGACTCGATCACGC CGAGCCCGGCCCCGC AGCGC GCGGGGCCGGGCTCG TGTCGTCTCCAGGGT CMS_2664 2812600 - 2811989 - | hypothetical protein CMS_2665 2812705 - 2813199 + | hypothetical protein CMS_2669 2815949 - 2817268 + | hypothetical protein CMS_2670 2818445 - 2817309 - | putative glycosyl transferase TERM 880 2818547 - 2818509 - R 72 -12.3 -3.64703 | gap 1 GCGGGCGCATCGAAA CGGCGCCGGCGGATCAGC GCGC GTCGCCCCGC-GGCGCCG CCGCGCTCTGGCGCA CMS_2671 2819613 - 2818522 - | LacI family transcriptional regulator CMS_2672 2819669 - 2820610 + | putative integral membrane transport protein CMS_2673 2820613 - 2821563 + | putative integral membrane transport protein CMS_2674 2821616 - 2822983 + | putative substrate-binding transport lipoprotein bga 2823016 - 2824863 + | beta-galactosidase CMS_2676 2825949 - 2824918 - | putative bacteriophage protein CMS_2677 2826106 - 2827596 + | putative aldehyde dehydrogenase TERM 881 2829361 - 2829331 - g 75 -13.2 -3.63515 | CGCGATCGTGAAGAA GGCGGAGGAGTCGG GCG CCGACTCCGACACC CTCGACGCGCTCCAG CMS_2680 2829200 - 2829442 + | hypothetical protein CMS_2681 2829812 - 2829567 - | hypothetical protein CMS_2682 2830094 - 2829954 - | hypothetical protein TERM 882 2830186 - 2830218 + r 93 -24.9 -2.53263 | CCGCCGGACGAGGGA CGGCCCCGGCCCTCG CGA TGAGGGTCGGGGCCG TCCGTTCGGGATGGG CMS_2683 2830410 - 2830237 - | hypothetical protein CMS_2684 2830501 - 2831067 + | hypothetical protein CMS_2685 2831834 - 2831064 - | hypothetical protein CMS_2686 2832548 - 2832090 - | hypothetical protein CMS_2687 2833440 - 2832568 - | hypothetical protein CMS_2688 2834107 - 2833580 - | hypothetical protein CMS_2689 2834708 - 2834205 - | putative DNA-binding protein CMS_2690 2835931 - 2834750 - | putative exported peptidase CMS_2691 2836518 - 2835928 - | hypothetical protein CMS_2692 2837933 - 2836518 - | hypothetical protein CMS_2693 2838189 - 2838800 + | hypothetical protein CMS_2694 2838827 - 2839150 + | hypothetical protein CMS_2695 2839202 - 2839954 + | hypothetical protein CMS_2696 2840027 - 2841523 + | putative integral membrane protein CMS_2697 2841620 - 2843044 + | hypothetical protein CMS_2698 2843197 - 2844675 + | putative ATP-binding protein CMS_2699 2844672 - 2846468 + | conjugal transfer protein CMS_2700 2846462 - 2846932 + | hypothetical protein CMS_2701 2846929 - 2847774 + | hypothetical protein CMS_2702 2849002 - 2847791 - | hypothetical protein CMS_2703 2850486 - 2849158 - | hypothetical protein CMS_2704 2850908 - 2850486 - | putative regulator CMS_2705 2851269 - 2850901 - | putative anti-sigma factor antagonist CMS_2706 2851535 - 2851903 + | hypothetical protein CMS_2707 2852538 - 2851900 - | putative mutase B1047H05.25 2852615 - 2853013 + | putative integral membrane protein CMS_2709 2852992 - 2853795 + | hypothetical protein CMS_2710 2853882 - 2854841 + | putative integral membrane protein CMS_2711 2854863 - 2855432 + | hypothetical protein CMS_2713 2857738 - 2857316 - | putative acetyltransferase CMS_2714 2857838 - 2858962 + | putative sortase-sorted surface protein TERM 883 2859031 - 2858979 - f 87 -22.8 -2.79796 | CGCCACCGCAGCACA GC-CACCACCGGACGCCCGTCCCCGC CTC GCGGGGGCGGGCGTCCG-TCATGCGC ACGGCCCGGACGCGG CMS_2715 2859116 - 2860075 + | putative integral membrane transport protein CMS_2716 2860075 - 2861070 + | putative integral membrane transport protein CMS_2717 2862331 - 2861072 - | hypothetical protein CMS_2718 2862620 - 2862339 - | putative transcriptional regulator TERM 884 2862654 - 2862603 - G 70 -16 -2.78596 | opp_overlap 2862598 2862614 GATCGTGTGAGCATA TCCCCACATGATGCTCATGTGAGT AAAT ACTCACTTGAGGGTGATGTGGGGA CATCCCCTCATCGCA CMS_2719 2863011 - 2862688 - | putative quaternary ammonium compound efflux protein CMS_2720 2864495 - 2863137 - | putative substrate-binding transport protein CMS_2721 2865522 - 2864620 - | putative secreted hydrolase glpX 2866523 - 2865534 - | fructose-1,6-bisphosphatase class II CMS_2723 2867727 - 2866582 - | putative integral membrane protein TERM 885 2868342 - 2868381 + r 72 -14.2 -3.41002 | overlap 2868343 2868346 2868351 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 886 2868343 - 2868380 + r 73 -17.7 -2.63878 | overlap 2868342 2868346 2868351 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 887 2868346 - 2868377 + r 73 -18 -2.6072 | overlap 2868343 2868342 2868351 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 888 2868351 - 2868372 + r 71 -15.1 -3.10677 | overlap 2868346 2868343 2868342 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2724 2869291 - 2868329 - | putative insertion element IS1121 transposase CMS_2725 2870384 - 2869389 - | putative integral membrane transport protein CMS_2726 2871499 - 2870489 - | putative integral membrane transport protein CMS_2727 2872703 - 2871606 - | putative substrate-binding transport lipoprotein CMS_2728 2873856 - 2872906 - | putative NUDIX hydrolase ppk 2876071 - 2873888 - | polyphosphate kinase TERM 889 2874195 - 2874228 + g 77 -16.1 -3.24924 | gap 1, opp_overlap 2874176 2874184, overlap 2874194 AACACGCGGCTGTGC TCGAGGTAGCGGCCGA GGA TCGACCGC-ACCTCGA TGTTCTCGCTGAGAC CMS_2730 2877079 - 2876165 - | putative acetyltransferase CMS_2731 2877740 - 2877048 - | putative transcriptional regulatory protein CMS_2732 2877794 - 2878060 + | hypothetical protein CMS_2733 2878104 - 2878220 + | putative small membrane protein CMS_2734 2878232 - 2878831 + | hypothetical protein CMS_2735 2878821 - 2879975 + | putative aminomethyltransferase CMS_2736 2879959 - 2881080 + | putative integral membrane protein CMS_2737 2881826 - 2883220 + | hypothetical protein CMS_2738 2884084 - 2883260 - | hypothetical protein gpmA 2884120 - 2884875 + | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase TERM 890 2884934 - 2884894 - T 100 -32.1 -2.52464 | opp_overlap 2884902, overlap 2884875 2884872 2884902 TCCCGCCCGAACGGA CGACGAGAGCCCGACCGGA TCA TCCGGTCGGGCTCTCGTCA TCGCTGCGGGTCGTG TERM 891 2884926 - 2884902 - T 84 -21.5 -2.83641 | opp_overlap 2884902, overlap 2884875 2884872 2884894 GAACGGACGACGAGA GCCCGACCGGA TCA TCCGGTCGGGC TCTCGTCATCGCTGC TERM 892 2884902 - 2884926 + T 84 -21.5 -2.83164 | opp_overlap 2884875 2884872 2884902 2884894 GAACGGACGACGAGA GCCCGACCGGA TCA TCCGGTCGGGC TCTCGTCATCGCTGC phoU 2885607 - 2884963 - | putative phosphate transport protein CMS_2741 2885835 - 2886983 + | putative two-component system sensor kinase CMS_2742 2886980 - 2887660 + | putative two-component system response regulator TERM 893 2887712 - 2887686 - T 71 -9.2 -3.96148 | opp_overlap 2887686 GGCCGGCATGACAAA GGCCCCGTCCCC CTG GGGGGGGCGGCC TTCGTCGCGAGAGGC CMS_2743 2888313 - 2887747 - | putative lipoprotein CMS_2744 2888479 - 2888961 + | putative transcription factor regulator ispDF 2889021 - 2890253 + | IspD/IspF bifunctional enzyme [includes: 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase; 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase cysS 2890337 - 2891791 + | cysteinyl-tRNA synthetase CMS_2747 2891781 - 2892854 + | putative tRNA/rRNA methyltransferase TERM 894 2892899 - 2892872 - T 100 -22.8 -3.91897 | opp_overlap 2892872 CGTCGCACGCACAAA GGAGCCGGGACC CCAT GGTCCCGGCTCC TTCGTCGTCGAGGCC TERM 895 2892872 - 2892899 + T 95 -22.8 -3.21099 | opp_overlap 2892872 CGTCGCACGCACAAA GGAGCCGGGACC CCAT GGTCCCGGCTCC TTCGTCGTCGAGGCC CMS_2748 2894234 - 2892930 - | hypothetical protein TERM 896 2894319 - 2894261 - R 91 -21.1 -3.55563 | gap 3, overlap 2894262 ACCCGACCCCGGAAA CGCTGCTGCCGCGG-CCCCGGCGCTCCC GGCGAG GGGAGCGAAGGGGACCGCGGCAGC-G-G TGGTGGGACGGCTCG TERM 897 2894320 - 2894262 - R 89 -23.8 -2.73124 | gap 1, overlap 2894261 CCCGACCCCGGAAAC GCTGCTGCCGCGG-CCCCGGCGCTCCC GGCGAG GGGAGCGAAGGGGACCGCGGCAGCGGT GGTGGGACGGCTCGA CMS_2749 2895499 - 2894336 - | putative ABC transporter ATP-binding protein CMS_2750 2895751 - 2896668 + | hypothetical protein CMS_2751 2897408 - 2896797 - | putative nitroreductase CMS_2752 2897869 - 2897405 - | putative oxidoreductase CMS_2753 2898044 - 2898373 + | hypothetical protein CMS_2754 2898407 - 2898979 + | hypothetical protein CMS_2755 2899216 - 2899434 + | putative cold shock protein TERM 898 2899449 - 2899480 + F 89 -23 -2.64616 | opp_overlap 2899419 GCGAGCTGCCCACCA CGACGCCGCCGCCC GTCC GGGGGGCGGCGTCG TCCTGTCCATGCCGG TERM 899 2899547 - 2899587 + F 80 -4 -4.7373 | gap 2, opp_overlap 2899547 2899548, overlap 2899547 2899548 2899549 GGGCGAGTGCCAGAA TC-GTC-CCTGGCACTCCCT CAC GGGGAGTGCTAGACGACTGC TTTTTCCTGACGTCC TERM 900 2899762 - 2899748 - g 74 -11.4 -3.78934 | CGTCCTGGAGAAGAA GTGGGG CGC CCCCAC CATCACGAACGACGG groL2 2899623 - 2901242 + | 60 kDa chaperonin 2 TERM 901 2901348 - 2901290 - T 100 -28.4 -2.78495 | gap 2, opp_overlap 2901306, overlap 2901299 2901306 CCAGCACGAACAGCA CCGACAGCACGACGAAGCGGGCGGTCCC TCACC GGGGCCGCCCGCTTCGTCGTGCT-CCG- GTCGTCCGACCGCGA TERM 902 2901341 - 2901299 - T 100 -30.7 -2.65442 | opp_overlap 2901306, overlap 2901290 2901306 ACAGCACCGACAGCA CGACGAAGCGGGCGGTCCC TCACC GGGGCCGCCCGCTTCGTCG TGCTCCGGTCGTCCG TERM 903 2901334 - 2901306 - T 84 -18.8 -3.24188 | opp_overlap 2901306, overlap 2901299 2901290 CGACAGCACGACGAA GCGGGCGGTCCC TCACC GGGGCCGCCCGC TTCGTCGTGCTCCGG TERM 904 2901306 - 2901334 + T 90 -21 -3.23216 | opp_overlap 2901306 2901299 2901290 CGACAGCACGACGAA GCGGGCGGTCCC TCACC GGGGCCGCCCGC TTCGTCGTGCTCCGG CMS_2757 2901673 - 2901383 - | hypothetical protein CMS_2758 2903480 - 2901720 - | putative two-component system sensor kinase CMS_2759 2904296 - 2903604 - | putative two-component system response regulator CMS_2760 2906014 - 2904374 - | putative DNA repair helicase CMS_2761 2907906 - 2906035 - | hypothetical protein CMS_2762 2908201 - 2907932 - | hypothetical protein CMS_2763 2908314 - 2908697 + | putative cold shock protein CMS_2764 2908690 - 2909382 + | hypothetical protein TERM 905 2909399 - 2909434 + T 89 -24 -2.62263 | CCTCATGCCGCATGA CGACGGCGGCGGTCCC CTCG GGGGCCGCCGCCGTCA TCGTCTCCGGGGCGT serC 2910570 - 2909452 - | putative phosphoserine aminotransferase CMS_2766 2910677 - 2911375 + | putative metal dependent regulatory protein TERM 906 2912238 - 2912184 - g 76 -14.9 -3.33261 | gap 2 CCTCAACGCGCAGAA GGCCGC-CGCCGCGCGCGCCGCC-CTC GCC GAGCAGCGCCGCACGCAGCTCGCGTCC TCGGCCACGAGCTAC CMS_2767 2911699 - 2912646 + | hypothetical protein TERM 907 2912900 - 2912937 + G 77 -16.3 -3.21276 | opp_overlap 2912906, overlap 2912899 CGGTCACCCGCTCTC CTAGAAGGCATCGCCGA GCAC TCGGCGGTGCCTTCGCG TGTTCTGCGGGGGCG TERM 908 2912931 - 2912906 - g 70 -14.7 -3.28712 | opp_overlap 2912900 2912899 CCCGCTCTCCTAGAA GGCATCGCCGA GCAC TCGGCGGTGCC TTCGCGTGTTCTGCG CMS_2768 2912821 - 2913504 + | hypothetical protein CMS_2769 2913538 - 2915634 + | putative endopeptidase CMS_2770 2916418 - 2915654 - | putative transcriptional regulator TERM 909 2916603 - 2916628 + r 84 -19.1 -3.21747 | GCTACGCGTGACGGA GAGCCCGACGA CGCG TCGTCGGGCTC TTCGTCATGCGATCC TERM 910 2918101 - 2918072 - R 100 -23.7 -3.21099 | opp_overlap 2918074 CCGTGGGACGACGAA GAGGGCCGATCCG CTGG CGGATCGGCCCTC TTCGCACGTGCTGCG TERM 911 2918074 - 2918099 + r 85 -20.5 -3.03441 | opp_overlap 2918072 GTGGGACGACGAAGA GGGCCGATCCG CTGG CGGATCGGCCC TCTTCGCACGTGCTG CMS_2772 2918489 - 2918139 - | hypothetical protein CMS_2773 2919637 - 2918855 - | hypothetical protein CMS_2774 2919848 - 2921455 + | hypothetical protein CMS_2775 2922652 - 2921465 - | putative hydantoin utilization protein CMS_2776 2924004 - 2922649 - | putative purine permease TERM 912 2922886 - 2922910 + g 73 -15 -3.28712 | overlap 2922897 CACGGGGACCCAGCG CGGTGCGCTG GCCGG CAGCGCGCCG TTCTCGCGCGACGCG TERM 913 2924359 - 2924377 + H 76 -12.4 -3.89346 | overlap 2924365 ACCCCTCATGCGACC GGTGCGGC GCG GTCGCACC TTTGTCCCATCGACG CMS_2777 2924477 - 2924935 + | hypothetical protein CMS_2778 2924932 - 2925558 + | hypothetical protein CMS_2780 2926461 - 2926637 + | hypothetical protein CMS_2782 2929243 - 2927465 - | hypothetical protein CMS_2783 2929574 - 2929230 - | hypothetical protein CMS_2784 2929659 - 2930771 + | hypothetical protein CMS_2785 2933414 - 2931387 - | putative conjugal trasnfer protein CMS_2786 2934051 - 2933458 - | hypothetical protein CMS_2787 2934760 - 2934089 - | hypothetical protein CMS_2788 2935344 - 2934757 - | hypothetical protein CMS_2789 2935981 - 2935385 - | hypothetical protein CMS_2790 2936799 - 2936026 - | hypothetical protein CMS_2791 2938879 - 2936804 - | hypothetical protein CMS_2792 2939284 - 2938970 - | hypothetical protein TERM 914 2939258 - 2939287 + g 70 -13.6 -3.22476 | gap 1, opp_overlap 2939255 GGAGGCAGCGAACCG CGCGATGTCGGCG AGGAG CGCCGGCA-CGCG TTCCTCGTCGATCAT CMS_2793 2939763 - 2939302 - | putative DNA-binding protein TERM 915 2939963 - 2939920 - H 70 -16.1 -2.64616 | overlap 2939872 GCGCGATCGAGAGCA GGCCGCCCGTGACGA-GCCCG GGGA CGAGCGTCGCCACGAGC-GCC GCCGCGCCCGCCGGA CMS_2795 2940039 - 2943842 + | hypothetical protein TERM 916 2944165 - 2944204 + T 72 -14.2 -3.41002 | overlap 2944166 2944169 2944174 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 917 2944166 - 2944203 + T 73 -17.7 -2.63878 | overlap 2944165 2944169 2944174 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 918 2944169 - 2944200 + T 73 -18 -2.6072 | overlap 2944166 2944165 2944174 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 919 2944174 - 2944195 + T 71 -15.1 -3.10677 | overlap 2944169 2944166 2944165 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2796 2945114 - 2944152 - | putative insertion element IS1121 transposase CMS_2797 2945262 - 2946332 + | putative integral membrane protein CMS_2798 2946329 - 2947240 + | hypothetical protein TERM 920 2947299 - 2947270 - T 76 -19.3 -2.62396 | opp_overlap 2947271 2947273 GACGCGCTGACACGA CGACGGGACGGCC GCAT GGCCGTCCCGTCT TGCGTGCGTGCGGCT TERM 921 2947271 - 2947298 + T 93 -22.8 -3.07816 | opp_overlap 2947270, overlap 2947273 ACGCGCTGACACGAC GACGGGACGGCC GCAT GGCCGTCCCGTC TTGCGTGCGTGCGGC TERM 922 2947273 - 2947296 + T 87 -19.6 -3.09878 | opp_overlap 2947270, overlap 2947271 GCGCTGACACGACGA CGGGACGGCC GCAT GGCCGTCCCG TCTTGCGTGCGTGCG CMS_2799 2948297 - 2947317 - | hypothetical protein TERM 923 2948481 - 2948505 + r 76 -10.7 -4.0371 | GTCACCCGGCAGGGG CCCCCTCGT CGCGCAT GCGAGGGGG TTTCTCTGCGCCGTC TERM 924 2948608 - 2948584 - R 73 -15.7 -3.21099 | CGGGCGCACGACGAA CGGCCCGGC GTCGTGG GCCGGGCCG TTCGCGGTGGTGCGT CMS_2800 2949335 - 2948649 - | putative lipoprotein CMS_2801 2950171 - 2949527 - | hypothetical protein CMS_2802 2950959 - 2950171 - | hypothetical protein CMS_2803 2951777 - 2950956 - | putative sortase-sorted surface-anchored protein CMS_2804 2952606 - 2951905 - | hypothetical protein CMS_2805 2956151 - 2952756 - | putative lipoprotein dnaK 2956555 - 2958426 + | chaperone protein DnaK TERM 925 2958502 - 2958459 - g 93 -24.6 -2.79796 | GGCGAGGGCACCACA CCCGAGGACGAGGGAGCCGA GCAG TCGGCTCCCGCGTCCCCGGC CGGGCCTGACGCCAC TERM 926 2958873 - 2958824 - g 77 -16.3 -3.29144 | gap 1 CGACCGGGCCGAGAA GCACGGCGAC-CTCGCGGAGGGCG GAC CGCTCACCGCGATCGTCGCCAAGC TGCGGACGAACGTGG grpE 2958423 - 2959076 + | GrpE heat shock protein dnaJ 2959197 - 2960210 + | chaperone protein DnaJ hspR 2960212 - 2960679 + | putative heat shock protein HspR CMS_2810 2960676 - 2961932 + | putative methyl transferase TERM 927 2962979 - 2962940 - g 72 -14.2 -3.41002 | overlap 2962941 2962944 2962949 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 928 2962978 - 2962941 - g 73 -17.7 -2.63878 | overlap 2962940 2962944 2962949 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 929 2962975 - 2962944 - g 73 -18 -2.6072 | overlap 2962941 2962940 2962949 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 930 2962970 - 2962949 - g 71 -15.1 -3.10677 | overlap 2962944 2962941 2962940 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_2811 2962030 - 2962992 + | putative insertion element IS1121 transposase CMS_2813 2964835 - 2966148 + | putative metallopeptidase CMS_2814 2966186 - 2967424 + | putative ATP-binding protein CMS_2815 2968030 - 2967452 - | hypothetical protein CMS_2816 2968755 - 2968051 - | hypothetical protein CMS_2817 2969210 - 2968752 - | putative acetyl transferase CMS_2818 2972753 - 2969211 - | putative bifunctional dehydrogenase CMS_2819 2973050 - 2973943 + | LysR family transcriptional regulator CMS_2820 2974865 - 2974017 - | hypothetical protein CMS_2821 2975626 - 2974862 - | hypothetical protein CMS_2822 2976411 - 2975800 - | putative integral membrane protein CMS_2823 2978094 - 2976529 - | sugar hydrolase TERM 931 2978419 - 2978362 - g 79 -18.9 -2.82193 | overlap 2978365 AGGAGACCGACGACA TGACCGCATCCCCGTCGCGCCCGCCCG CCGC CGGGCCGGCGCGACGCGTGCGCGACCG GGTCCGGCTGCTCGC TERM 932 2978416 - 2978365 - g 84 -21.4 -2.67143 | overlap 2978362 AGACCGACGACATGA CCGCATCCCCGTCGCGCCCGCCCG CCGC CGGGCCGGCGCGACGCGTGCGCGA CCGGGTCCGGCTGCT CMS_2824 2978292 - 2980001 + | putative sugar hydrolase CMS_2825 2980500 - 2980033 - | MarR family transcriptional regulator CMS_2826 2980977 - 2980567 - | hypothetical protein CMS_2827 2982074 - 2981133 - | putative aldose epimerase CMS_2828 2982114 - 2982962 + | hypothetical protein CMS_2829 2983971 - 2983027 - | hypothetical protein CMS_2830 2984099 - 2985274 + | hypothetical protein CMS_2831 2986021 - 2985314 - | hypothetical protein pfkA 2986042 - 2987085 + | 6-phosphofructokinase CMS_2833 2987151 - 2988176 + | putative alcohol dehydrogenase CMS_2834 2988270 - 2988662 + | hypothetical protein TERM 933 2988664 - 2988698 + F 73 -16.4 -3.01712 | gap 1 CCGCCGCCTCCTGAT CCGTCGGCGGCCGGC CGCGAT GCCGGCCGCCG-CGC TCTTCCGGAGCACCG TERM 934 2988917 - 2988947 + G 78 -18.2 -3.14132 | CGAGCAGGCGACCGA GCGCATGGCGGCGG ATC CCGTCGCCGCGCGC TTCATCAGCACCCGC CMS_2835 2988819 - 2989400 + | putative heme oxygenase CMS_2836 2989582 - 2990331 + | putative DNA/RNA non-specific endonuclease CMS_2837 2990450 - 2991289 + | putative pat-1 homologue hemL 2992705 - 2991338 - | glutamate-1-semialdehyde 2,1-aminomutase TERM 935 2992069 - 2992127 + g 81 -17.2 -3.28712 | opp_overlap 2992105, overlap 2992070 2992125 CGGCGGCCTCCGTGA TGACGGCGGCGATGCGCGGGCCGTGCTC CGC GAACACGGCGCGCACGGCGCCGAGGTCG TTGTAGGGCACGACG TERM 936 2992070 - 2992126 + g 76 -18.5 -2.57132 | opp_overlap 2992105, overlap 2992069 2992125 GGCGGCCTCCGTGAT GACGGCGGCGATGCGCGGGCCGTGCTC CGC GAACACGGCGCGCACGGCGCCGAGGTC GTTGTAGGGCACGAC hemB 2993766 - 2992786 - | delta-aminolevulinic acid dehydratase CMS_2840 2994602 - 2993763 - | putative uroporphyrin-III c-methyltransferase/uroporphyrinogen-III synthase hemC 2995585 - 2994599 - | porphobilinogen deaminase hemH 2996736 - 2995582 - | ferrochelatase CMS_2843 2998292 - 2996832 - | putative heme synthetase CMS_2844 2999961 - 2998324 - | putative integral membrane protein CMS_2845 3000258 - 2999983 - | hypothetical protein CMS_2846 3000664 - 3000248 - | putative integral membrane protein TERM 937 3000317 - 3000335 + g 74 -11.7 -3.71848 | overlap 3000324 GTCGACCGTCTCCTC GGGCGTC GGCGG GACGCCC TTCTTGATCCAGCGC CMS_2847 3001038 - 3000697 - | hypothetical protein hemY 3002551 - 3001166 - | protoporphyrinogen oxidase TERM 938 3001754 - 3001711 - G 80 -7.9 -4.37886 | gap 1, overlap 3001712 CGAGTCCCGAGAAAA GGCGGGTGAGCCCCGCAGCG GGGAT CGC-GAGGACCACGCCCGCC GCGTCGATGCCGCGG hemE 3003707 - 3002598 - | uroporphyrinogen decarboxylase hemA 3003824 - 3005143 + | glutamyl-tRNA reductase CMS_2851 3005140 - 3005775 + | putative acetyltransferase CMS_2852 3005790 - 3006395 + | putative acetyltransferase TERM 939 3006945 - 3006984 + GT 72 -14.2 -3.41002 | overlap 3006946 3006949 3006954 GGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 940 3006946 - 3006983 + GT 73 -17.7 -2.63878 | overlap 3006945 3006949 3006954 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 941 3006949 - 3006980 + GT 73 -18 -2.6072 | overlap 3006946 3006945 3006954 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 942 3006954 - 3006975 + GT 71 -15.1 -3.10677 | overlap 3006949 3006946 3006945 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_2854 3007894 - 3006932 - | putative insertion element IS1121 transposase CMS_2853 3006405 - 3007001 + | putative NUDIX hydrolase add 3009110 - 3007992 - | adenosine deaminase CMS_2856 3009213 - 3010148 + | putative nucleoside hydrolase deoA 3011496 - 3010198 - | thymidine phosphorylase CMS_2858 3011924 - 3011493 - | cytidine deaminase CMS_2859 3013222 - 3011921 - | putative integral membrane transport protein CMS_2860 3014580 - 3013219 - | putative integral membrane transport protein TERM 943 3014252 - 3014214 - G 73 -16.7 -3.02511 | gap 1 TCGAGCCCTGGAAGA GCGCGGAGTAGG-CGCCG GACG CGGCGTCCCACCCGGCGC GCAGGGTGTCGAGCG CMS_2861 3016118 - 3014577 - | putative ABC transporter ATP-binding protein TERM 944 3015947 - 3015981 + g 71 -15.6 -3.15544 | CGTCGAGGAGGATCT CGCCCTCCTCGGCCTG GTA CAGGCCGTAGAGGACG TTCATCAGCGTGGAC TERM 945 3016149 - 3016192 + r 88 -21.6 -3.11687 | overlap 3016153 GGTGGGTGTGGTGAG CACGCGGCGGGGGGACCGGC GACT GCCGATCCCCCCGCGGTGCG TTCGATGCTACTTCG TERM 946 3016153 - 3016188 + r 86 -21.8 -2.55544 | overlap 3016149 GGTGTGGTGAGCACG CGGCGGGGGGACCGGC GACT GCCGATCCCCCCGCGG TGCGTTCGATGCTAC CMS_2862 3017294 - 3016200 - | putative substrate-binding transport lipoprotein CMS_2863 3018521 - 3017445 - | putative substrate-binding transport lipoprotein manC 3019717 - 3018596 - | mannose-1-phosphate guanylyltransferase CMS_2865 3019835 - 3021010 + | putative glycosyl transferase TERM 947 3021235 - 3021282 + F 76 -4.3 -4.49314 | gap 3, overlap 3021237 CTGTACCGGGGCCGT GA-GGGCATGT-GGTCATG-GGTG TTG CACCGCATAACCGGCGTGTCCATC TTCTTTTTCCTCCTC sdhC 3021241 - 3021585 + | succinate dehydrogenase cytochrome b556 subunit sdhD 3021576 - 3022052 + | succinate dehydrogenase hydrophobic membrane anchor protein sdhA 3022086 - 3023909 + | succinate dehydrogenase flavoprotein subunit sdhB 3024030 - 3024728 + | succinate dehydrogenase iron-sulfur protein TERM 948 3024786 - 3024751 - T 100 -30.6 -3.16564 | GCCCCACCGCACGAA CACGGCCCCGCAGCTC CTCG GAGCTGCGGGGCCGTG CGTCTGCGCGGGCGG ptsI 3026458 - 3024803 - | phosphoenolpyruvate-protein phosphotransferase TERM 949 3026200 - 3026164 - G 71 -7.7 -4.09739 | CGAACGCCTCGAAAA CGGCGCGCTCGCCCGAG CGT CCCTGGCCGACGAGCCG GCTGACCGAGTCGAG CMS_2871 3026584 - 3027708 + | putative integral membrane protein CMS_2872 3027719 - 3028564 + | putative nuclease trpS 3028653 - 3029666 + | tryptophanyl-tRNA synthetase CMS_2874 3029663 - 3030469 + | putative hydrolase CMS_2875 3031674 - 3030583 - | putative lipoprotein ribD 3032162 - 3033229 + | riboflavin biosynthesis protein RibD ribE 3033226 - 3033900 + | riboflavin synthase alpha chain ribA 3033897 - 3035258 + | riboflavin biosynthesis protein RibA ribH 3035255 - 3035737 + | 6,7-dimethyl-8-ribityllumazine synthase CMS_2880 3035839 - 3036693 + | putative ABC transporter ATP-binding subunit CMS_2881 3036690 - 3037547 + | putative ABC transporter ATP-binding subunit CMS_2882 3037601 - 3038989 + | putative integral membrane transport protein TERM 950 3039872 - 3039841 - g 71 -15 -3.05844 | CGCTGTACCTCAACA CGCGGACGGGCCCG TTCG CGGACCCGGCCGTG CGCGCCGCCGCCCAG CMS_2883 3038979 - 3040538 + | putative substrate-binding transport lipoprotein CMS_2884 3040538 - 3042331 + | putative integral membrane transport protein TERM 951 3043382 - 3043335 - g 81 -17.6 -3.2244 | overlap 3043328 3043330 3043339 CACTACAACACTGAA CGGATCCACTCGAGCCACGGGC TGAC GCCCGCGGCCCGAGTGTCACCA ACGTCATGACCCAGT TERM 952 3043378 - 3043339 - g 73 -17.8 -2.57335 | overlap 3043335 3043328 3043330 ACAACACTGAACGGA TCCACTCGAGCCACGGGC TGAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC CMS_2885 3042429 - 3043391 + | putative insertion element IS1121 transposase CMS_2886 3044331 - 3043402 - | putative integral membrane transport protein CMS_2887 3044540 - 3046201 + | putative sortase-sorted surface-anchored protein TERM 953 3047315 - 3047276 - gT 72 -14.2 -3.41002 | overlap 3047277 3047280 3047285 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 954 3047314 - 3047277 - gT 73 -17.7 -2.63878 | overlap 3047276 3047280 3047285 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 955 3047311 - 3047280 - gT 73 -18 -2.6072 | overlap 3047277 3047276 3047285 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT CMS_2889 3048599 - 3047259 - | hypothetical protein TERM 956 3047306 - 3047285 - Gg 71 -15.1 -3.10677 | overlap 3047280 3047277 3047276 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_2888 3046366 - 3047328 + | putative insertion element IS1121 transposase CMS_2890 3048970 - 3048596 - | hypothetical protein CMS_2891 3049623 - 3049165 - | hypothetical protein CMS_2892 3051483 - 3049777 - | putative integral membrane transport protein TERM 957 3051018 - 3050992 - G 71 -10.1 -3.71848 | gap 1 GTGGTCGACGAAGAA GCCGCCGAGCAG CGGT CCGC-CGACGGC CGAGAGGCCGAAGAT CMS_2893 3052190 - 3051480 - | TetR family transcriptional regulator CMS_2894 3052939 - 3052229 - | hypothetical protein CMS_2895 3053253 - 3052942 - | hypothetical protein pit 3054482 - 3053265 - | putative low-affinity inorganic phosphate transporter CMS_2897 3054610 - 3055188 + | putative acetyltranferase CMS_2898 3055326 - 3056747 + | hypothetical protein CMS_2899 3056744 - 3057373 + | putative oxidoreductase CMS_2900 3057462 - 3058367 + | hypothetical protein CMS_2901 3058373 - 3058912 + | hypothetical protein TERM 958 3059185 - 3059145 - g 78 -18.1 -3.14132 | GGTGCTGCCGATCAA GCGCGCGGTCCGCGACGCC CAG GGCCTCGAGGTCGGCGCGC CCGTGTACGTCGACC CMS_2902 3058912 - 3059217 + | hypothetical protein CMS_2903 3059589 - 3059230 - | putative drug resistance dioxygenase TERM 959 3059630 - 3059677 + r 81 -17.6 -3.2244 | overlap 3059627 3059627 3059634 ACTGAGTCATGACGT TGGTGACACTCGGGCCGCGGGC GTCA GCCCGTGGCTCGAGTGGATCCG TTCAGTGTTGTAGTG TERM 960 3059634 - 3059673 + r 73 -17.8 -2.57335 | overlap 3059630 3059627 3059627 AGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTCA GCCCGTGGCTCGAGTGGA TCCGTTCAGTGTTGT CMS_2904 3060583 - 3059621 - | putative insertion element IS1121 transposase CMS_2905 3060885 - 3062570 + | putative integral membrane transport protein CMS_2906 3062567 - 3063133 + | MarR family transcriptional regulator CMS_2907 3063903 - 3063154 - | hypothetical protein CMS_2909 3065098 - 3066003 + | putative pat-1 homologue CMS_2910 3068555 - 3066591 - | putative surface-anchored protein TERM 961 3069525 - 3069478 - g 76 -19 -2.62616 | overlap 3069490 GCACGGGCTACACGA CCGCCGCGAAGACCAGCGCGGC CTCG GCCGCGGTCGTCGCCGCGCCGG TCACGACCCCGTCGA CMS_2911 3068826 - 3071936 + | putative surface-anchored protein CMS_2912 3072103 - 3073911 + | putative surface-anchored protein CMS_2913 3074005 - 3074751 + | putative surface-anchored protein CMS_2914 3074859 - 3077111 + | putative surface-anchored protein CMS_2915 3080116 - 3077678 - | phosphoketolase CMS_2917 3080964 - 3081287 + | hypothetical protein TERM 962 3081265 - 3081312 + F 100 -22.8 -3.6215 | opp_overlap 3081282, overlap 3081266 3081268 GGAGGCGGCGGATTC TCGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTGG TTTCGGGTGAGTTGC TERM 963 3081266 - 3081311 + F 89 -24.1 -2.76969 | opp_overlap 3081282, overlap 3081265 3081268 GAGGCGGCGGATTCT CGTGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCGTG GTTTCGGGTGAGTTG TERM 964 3081268 - 3081309 + F 91 -23.1 -2.92792 | opp_overlap 3081282, overlap 3081266 3081265 GGCGGCGGATTCTCG TGGTCCCCGCAACACCCTG AGTT CAGGGGGTTGCGGGGATCG TGGTTTCGGGTGAGT TERM 965 3082651 - 3082624 - g 100 -19.2 -4.21194 | opp_overlap 3082617 3082614 GCCGACCACGCAAAA CGCTCGACTGGG ACAC CCCAGCCGAGCG AATGCGTGCTCTACT CMS_2918 3081387 - 3082679 + | putative insertion element ISCmi3 transposase CMS_2919 3083632 - 3082754 - | hypothetical protein CMS_2920 3084201 - 3083764 - | MarR family transcriptional regulator CMS_2921 3084396 - 3086378 + | putative integral membrane protein CMS_2923 3087417 - 3087956 + | putative hydrolase CMS_2924 3088690 - 3087965 - | hypothetical protein ald 3089882 - 3088764 - | L-alanine dehydrogenase CMS_2926 3090050 - 3090544 + | AsnC family transcriptional regulator TERM 966 3090589 - 3090638 + F 70 -14.5 -3.18383 | gap 2, opp_overlap 3090589 GGGGCGGATAGCGAA GACCTCCG-GGACGATG-TGGGT TACCAC ACTCATCAACGTCCACGGAGGTC TTCGTGACTCACGCT CMS_2927 3090642 - 3091604 + | putative insertion element ISCmi2 transposase CMS_2928 3092104 - 3091601 - | putative acetyltransferase CMS_2929 3092766 - 3092227 - | putative integral membrane protein CMS_2930 3093750 - 3092776 - | AraC family transcriptional regulator CMS_2931 3093865 - 3094590 + | putative short chain oxidoreductase CMS_2932 3094798 - 3094607 - | hypothetical protein CMS_2933 3094973 - 3095488 + | hypothetical protein CMS_2934 3095494 - 3096423 + | putative integral membrane protein CMS_2935 3096447 - 3097307 + | putative oxidoreductase CMS_2936 3098676 - 3097348 - | putative multi anti extrusion protein TERM 967 3097644 - 3097606 - G 73 -15.3 -3.21099 | gap 1, overlap 3097608 GCCGTCGAGCACGAA CACGTAGCCCGCGACCGG CAGG CCGATCGCGAGC-ACGAG CGTCACGGCGGTGAG TERM 968 3097642 - 3097608 - G 74 -16.5 -3.17051 | gap 1, overlap 3097606 CGTCGAGCACGAACA CGTAGCCCGCGACCGG CAGG CCGATCGCGAGC-ACG AGCGTCACGGCGGTG CMS_2937 3100613 - 3098781 - | hypothetical protein CMS_2938 3100911 - 3101606 + | hypothetical protein CMS_2939 3101626 - 3102312 + | hypothetical protein CMS_2940 3102302 - 3103102 + | putative sortase-sorted surface-anchored protein CMS_2941 3103099 - 3104982 + | hypothetical protein CMS_2942 3105006 - 3105497 + | MarR family transcriptional regulator CMS_2943 3106308 - 3105535 - | putative integral membrane transport protein CMS_2944 3106933 - 3106328 - | hypothetical protein CMS_2945 3107325 - 3106972 - | hypothetical protein CMS_2946 3109601 - 3107487 - | hypothetical protein TERM 969 3109278 - 3109323 + g 73 -15.2 -3.28712 | CGTGAAGGGGAGCTT CGACGCGGCCTGCGCGGCCG CTGCCT CGGCGCCGGGGGCCGCGGCG TTCTGCGCCACGAGG CMS_2947 3109755 - 3110507 + | putative cyclohexanol dehydrogenase CMS_2948 3110925 - 3110632 - | putative secondary metabolism monooxygenase TERM 970 3110956 - 3110913 - G 70 -16 -2.62263 | gap 1 ACTCCGCGTACAGCA CCGTGGCGGTCATGCCGTGGC CGC GCC-CGTCATGATCGCGACGG CGTCGGTCATCGAGT CMS_2949 3111740 - 3110922 - | ABC transporter ATP-binding protein CMS_2950 3112780 - 3111716 - | putative sugar transport integral membrane protein CMS_2951 3113865 - 3112765 - | putative substrate-binding transport lipoprotein CMS_2952 3113979 - 3115031 + | LacI family transcriptional regulator CMS_2953 3115024 - 3115914 + | putative carbohydrate kinase CMS_2954 3116322 - 3116735 + | hypothetical protein CMS_2955 3116751 - 3117209 + | putative DNA-binding protein TERM 971 3117551 - 3117564 + G 73 -4.5 -4.4195 | TCAAATCAGAGTTTG CGCAG GAGG TTGCG TTTTATGCCGTATAT CMS_2956 3117229 - 3117735 + | hypothetical protein TERM 972 3117893 - 3117869 - g 74 -17.1 -3.10112 | AGCGAATCGATCGAA CCGCCGAGCGG GAC CCCCTCGGCGG CGGTGCTCGAGCAGG CMS_2957 3117848 - 3118879 + | hypothetical protein CMS_2958 3119631 - 3118909 - | hypothetical protein CMS_2959 3120671 - 3119628 - | putative integral membrane protein CMS_2960 3120737 - 3121633 + | LysR family transcriptional regulator CMS_2961 3121767 - 3122417 + | putative integral membrane protein CMS_2962 3123287 - 3122433 - | hypothetical protein CMS_2963 3124030 - 3123281 - | putative integral membrane protein CMS_2964 3124848 - 3124027 - | putative antibiotic processing protein CMS_2965 3125908 - 3124859 - | hypothetical protein CMS_2967 3127907 - 3127179 - | putative hydroxylase CMS_2968 3128671 - 3127904 - | putative integral membrane transport protein CMS_2969 3129540 - 3128668 - | putative ABC transporter ATP-binding protein TERM 973 3129959 - 3129909 - R 100 -25.5 -2.87132 | gap 2 CCGCTCGTCCAGACA GCACG-CG-CGCGCGGACCCGCCCC CTG GGCGCGGGTCCGCGCGTCGTCCTGC CGGCCGCGCGTCGCG CMS_2970 3131198 - 3130332 - | putative oxidoreductase CMS_2971 3132590 - 3131319 - | putative integral membrane transport protein CMS_2972 3133159 - 3132683 - | hypothetical protein CMS_2973 3133178 - 3134041 + | hypothetical protein mmuM 3135010 - 3134105 - | homocysteine s-methyltransferase CMS_2975 3135160 - 3135693 + | MarR family transcriptional regulator CMS_2976 3135732 - 3136430 + | putative hydrolase CMS_2978 3136917 - 3137435 + | hypothetical protein CMS_2979 3137472 - 3137945 + | hypothetical protein CMS_2980 3138151 - 3138393 + | hypothetical protein CMS_2981 3138459 - 3138995 + | hypthetical protein TERM 974 3139062 - 3139028 - T 100 -27.3 -2.71731 | opp_overlap 3139033, overlap 3139033 CTGAGTCGGCAACGA CGAGAGGGCCGACCC GTAAA GGGTCGGCCCTCTCG TCGTGCTCCTCGCGC TERM 975 3139057 - 3139033 - T 79 -18.6 -2.86164 | opp_overlap 3139033, overlap 3139028 TCGGCAACGACGAGA GGGCCGACCC GTAAA GGGTCGGCCC TCTCGTCGTGCTCCT TERM 976 3139033 - 3139057 + T 79 -18.6 -2.83894 | opp_overlap 3139028 3139033 TCGGCAACGACGAGA GGGCCGACCC GTAAA GGGTCGGCCC TCTCGTCGTGCTCCT CMS_2982 3139412 - 3139077 - | putative Lsr2-like protein CMS_2983 3139569 - 3139958 + | hypothetical protein TERM 977 3140334 - 3140371 + G 71 -13.3 -3.50853 | CGAGCGCGACTACGA CGGGTGGGCGGTCGCCG GTGC CGCCGACTCCCTGCCCG TTCTCCTTGAGGCGG CMS_2984 3140134 - 3140850 + | hypothetical protein CMS_2985 3141311 - 3140940 - | hypothetical protein CMS_2986 3141677 - 3142288 + | hypothetical protein CMS_2987 3142793 - 3142302 - | hypothetical protein CMS_2988 3143590 - 3143069 - | putative DNA invertase CMS_2989 3144148 - 3144990 + | putative pat-1 homologue CMS_2990 3145763 - 3145443 - | hypothetical protein CMS_2991 3146989 - 3145967 - | putative pat-1 homologue TERM 978 3146876 - 3146900 + g 74 -11.3 -3.80625 | opp_overlap 3146869 GGTACACAGGCAGGC CGTGCACGGGC GAT GCCCGGACACG TTTGACTTGTACGCC CMS_2993 3147771 - 3147346 - | hypothetical protein CMS_2994 3148604 - 3147933 - | GntR family transcriptional regulator CMS_2995 3148752 - 3150128 + | putative nucleotide transporter CMS_2996 3150125 - 3150856 + | putative isochorismatase hydrolase CMS_2998 3153641 - 3152400 - | putative nucleotide permease TERM 979 3154877 - 3154838 - g 72 -14.2 -3.41002 | overlap 3154839 3154842 3154847 ACAACACTGAACGAA TCCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC TERM 980 3154876 - 3154839 - g 73 -17.7 -2.63878 | overlap 3154838 3154842 3154847 CAACACTGAACGAAT CCACTCAAGCCACGGGC TCAC GCCCGCGGCCCGAGTGT CACCAACGTCATGAC TERM 981 3154873 - 3154842 - g 73 -18 -2.6072 | overlap 3154839 3154838 3154847 CACTGAACGAATCCA CTCAAGCCACGGGC TCAC GCCCGCGGCCCGAG TGTCACCAACGTCAT TERM 982 3154868 - 3154847 - g 71 -15.1 -3.10677 | overlap 3154842 3154839 3154838 AACGAATCCACTCAA GCCACGGGC TCAC GCCCGCGGC CCGAGTGTCACCAAC CMS_2999 3153928 - 3154890 + | putative insertion element IS1121 transposase CMS_3000 3155863 - 3154901 - | putative insertion element ISCmi2 transposase TERM 983 3155916 - 3155867 - R 70 -14.5 -3.18383 | gap 2, opp_overlap 3155867 AGCGTGAGTCACGAA GACCTCCGTGGACGTTGATGAGT GTGGTA ACCCA-CATCGTCC-CGGAGGTC TTCGCTATCCGCCCC CMS_3001 3156806 - 3155961 - | putative peptidase CMS_3002 3156970 - 3157428 + | hypothetical protein suhB 3158298 - 3157489 - | inositol-1-monophosphatase CMS_3004 3159086 - 3158343 - | putative integral membrane protein CMS_3005 3160126 - 3159140 - | putative exported oxidoreductase TERM 984 3160203 - 3160236 + H 82 -18.9 -3.05816 | gap 1, opp_overlap 3160206, overlap 3160207 GGACGCGTCGGGGAC AGACGGACGGCCCCGC ACA GCGGGGCCGTCC-TCG TTCGGTGGCGAGTGA TERM 985 3160234 - 3160206 - H 84 -21.7 -2.87132 | opp_overlap 3160203 3160207 CGCGTCGGGGACAGA CGGACGGCCCCGC ACA GCGGGGCCGTCCT CGTTCGGTGGCGAGT TERM 986 3160207 - 3160233 + H 93 -25.2 -2.75064 | opp_overlap 3160206, overlap 3160203 GCGTCGGGGACAGAC GGACGGCCCCGC ACA GCGGGGCCGTCC TCGTTCGGTGGCGAG CMS_3006 3160445 - 3160942 + | hypothetical protein cls 3161048 - 3162505 + | cardiolipin synthetase CMS_3008 3163172 - 3162579 - | MarR family transcriptional regulator CMS_3009 3163829 - 3163203 - | putative type IV leader peptidase fprA 3165332 - 3163962 - | NADPH-ferredoxin reductase CMS_3011 3166401 - 3165424 - | putative polyprenyl diphosphate synthase ubiE 3167270 - 3166533 - | menaquinone biosynthesis methyltransferase menF 3167428 - 3168702 + | menaquinone-specific isochorismate synthase (isochorismate mutase) CMS_3014 3169928 - 3168699 - | integral membrane transport protein CMS_3015 3170491 - 3169925 - | ArsR family transcriptional regulator CMS_3016 3170538 - 3171308 + | putative tyrosine-protein phosphatase menD 3173111 - 3171342 - | menaquinone biosynthesis protein MenD CMS_3018 3173550 - 3173116 - | hypothetical protein TERM 987 3173752 - 3173782 + G 81 -17.6 -3.30124 | CCTGTTCGCCGTCCC GTTCGGGCTCGTCG TCG CGGTGAGCCCGGAC TTCTGGCCGCTCGCC CMS_3019 3173690 - 3174076 + | hypothetical protein CMS_3020 3174464 - 3174087 - | hypothetical protein menA 3175354 - 3174470 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase CMS_3022 3176313 - 3175561 - | putative phosphoglycerate mutase CMS_3023 3177321 - 3176413 - | putative beta-lactamase CMS_3024 3179315 - 3177333 - | putative metallopeptidase TERM 988 3179353 - 3179392 + r 72 -14.2 -3.41002 | overlap 3179354 3179357 3179362 AGTCATGACGTTGGT GACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGGA TTCGTTCAGTGTTGT TERM 989 3179354 - 3179391 + r 73 -17.7 -2.63878 | overlap 3179353 3179357 3179362 GTCATGACGTTGGTG ACACTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAGTGG ATTCGTTCAGTGTTG TERM 990 3179357 - 3179388 + r 73 -18 -2.6072 | overlap 3179354 3179353 3179362 ATGACGTTGGTGACA CTCGGGCCGCGGGC GTGA GCCCGTGGCTTGAG TGGATTCGTTCAGTG TERM 991 3179362 - 3179383 + r 71 -15.1 -3.10677 | overlap 3179357 3179354 3179353 GTTGGTGACACTCGG GCCGCGGGC GTGA GCCCGTGGC TTGAGTGGATTCGTT CMS_3025 3180302 - 3179340 - | putative insertion element IS1121 transposase CMS_3027 3180656 - 3180772 + | hypothetical protein CMS_3028 3181174 - 3180782 - | hypothetical protein CMS_3029 3181671 - 3181183 - | hypothetical protein dcd 3182470 - 3181865 - | deoxycytidine triphosphate deaminase CMS_3031 3182780 - 3183847 + | hypothetical protein CMS_3032 3185292 - 3183844 - | putative restriction-modification system methyltransferase TERM 992 3185520 - 3185510 - g 71 -4.6 -4.25104 | overlap 3185511 TGCGCCTGAGCAAAA CGAG GTG CCCG CTACTCACATAGCCG CMS_3033 3185397 - 3186572 + | putative restriction-modification system methyltransferase CMS_3034 3187364 - 3186609 - | putative transcriptional regulator gntP 3187392 - 3188792 + | gluconate permease TERM 993 3189843 - 3189796 - g 81 -17.6 -3.2244 | overlap 3189789 3189791 3189800 CACTACAACACTGAA CGGATCCACTCGAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTCACCA ACGTCATGACCCAGT TERM 994 3189839 - 3189800 - g 73 -17.8 -2.57335 | overlap 3189796 3189789 3189791 ACAACACTGAACGGA TCCACTCGAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC CMS_3036 3188890 - 3189852 + | putative insertion element IS1121 transposase CMS_3037 3190924 - 3189896 - | LacI family transcriptional regulator CMS_3038 3191904 - 3190981 - | putative sugar transport integral membrane protein CMS_3039 3193007 - 3191901 - | putative sugar transport integral membrane protein CMS_3040 3194414 - 3193095 - | putative sugar-binding transport lipoprotein TERM 995 3194360 - 3194395 + g 70 -14.6 -3.28003 | gap 1, overlap 3194361 TCGCGAGGAGGGCGA TGACCGCGG-CGCCGGC GAT GCCGGCGGCCGCGCGCG TTCGTGCTGTGTTCG CMS_3041 3194576 - 3195592 + | putative oxidoreductase CMS_3042 3195729 - 3196280 + | putative exported oxidoreductase TERM 996 3197776 - 3197729 - T 76 -19.3 -2.62263 | gap 2, overlap 3197759 3197762 ACGCCGCTCAGACGA TCCGCCCCGG-TGAGTCG-GTCG TCCA CGACACGACCGATCCGGGGCGGA TCTGGAGGGCCGGTG CMS_3046 3198263 - 3197937 - | hypothetical protein CMS_3047 3198725 - 3198402 - | hypothetical protein CMS_3048 3199055 - 3199939 + | manganese catalase CMS_3049 3200045 - 3200824 + | putative beta-lactamase CMS_3050 3200821 - 3201558 + | putative phosphoglycerate mutase CMS_3051 3201542 - 3202435 + | hypothetical protein CMS_3052 3202528 - 3202731 + | hypothetical protein CMS_3053 3202968 - 3202753 - | hypothetical protein deoC 3203069 - 3203791 + | deoxyribose-phosphate aldolase CMS_3055 3203791 - 3205086 + | putative aminopeptidase CMS_3056 3205908 - 3205195 - | putative lipoprotein CMS_3057 3205964 - 3206617 + | putative carboxymethylenebutenolidase CMS_3058 3206715 - 3207134 + | putative integral membrane protein CMS_3059 3207258 - 3207959 + | putative integral membrane protein CMS_3060 3209295 - 3207994 - | putative helicase CMS_3061 3209429 - 3210448 + | hypothetical protein CMS_3062 3210564 - 3210986 + | hypothetical protein CMS_3063 3211873 - 3211010 - | putative iron-siderophore uptake system ATP-binding component CMS_3064 3212957 - 3211893 - | putative iron-siderophore uptake system transmembrane component TERM 997 3212912 - 3212970 + g 72 -16.5 -2.87132 | CGGTGCCGGGAATGC GCGCGGCGGGGCGGCGGCCG-GCGTCGGC GCG GGCG-CGCGCGCTCACAGCCCCGCCGCCC TCTGTCGGCGGACGA CMS_3065 3214012 - 3212954 - | putative iron-siderophore uptake system transmembrane component CMS_3066 3214115 - 3215119 + | putative iron-siderophore binding lipoprotein CMS_3067 3215293 - 3215805 + | putative integral membrane protein CMS_3068 3217690 - 3215834 - | putative integral membrane transport protein TERM 998 3217887 - 3217931 + r 100 -28 -2.78384 | gap 1 GCGACCGGCCGGGAA CGCGACAGCGGGGGCGTCGAC CGGA GTCGACGCCCCCGCTGG-GCG TGTGGTGAGGAGGAC hup 3218233 - 3217946 - | DNA-binding protein HU rpsN 3218670 - 3218365 - | 30S ribosomal protein S14 rpmG 3218840 - 3218673 - | 50S ribosomal protein L33 rpmB 3219076 - 3218840 - | 50S ribosomal protein L28 fur 3219714 - 3219271 - | ferric uptake regulation protein CMS_3074 3220637 - 3219711 - | putative ABC transporter integral membrane protein fhuC 3221572 - 3220634 - | putative ABC transporter ATP-binding protein CMS_3076 3222516 - 3221569 - | putative substrate-binding transport protein sucB 3224028 - 3222586 - | dihydrolipoamide acyltransferase component pdhB 3225012 - 3224047 - | pyruvate dehydrogenase E1 component, beta subunit pdhA 3226211 - 3225099 - | pyruvate dehydrogenase E1 component, alpha subunit pat 3227336 - 3226221 - | putative phenylalanine aminotransferase CMS_3081 3227407 - 3227802 + | putative integral membrane protein CMS_3082 3229172 - 3227811 - | hypothetical protein CMS_3083 3229480 - 3229169 - | hypothetical protein ptpA 3229613 - 3230140 + | low molecular weight protein-tyrosine-phosphatase purB 3230163 - 3231536 + | adenylosuccinate lyase CMS_3086 3231925 - 3231656 - | hypothetical protein CMS_3087 3232602 - 3231928 - | putative integral membrane protein CMS_3088 3232691 - 3232807 + | putative small membrane protein CMS_3089 3232927 - 3233811 + | putative glucokinase CMS_3090 3234028 - 3234999 + | putative glycerate kinase CMS_3091 3236274 - 3235012 - | putative glycosyl transferase CMS_3092 3236457 - 3236846 + | MerR family transcriptional regulator prfC 3236945 - 3238570 + | peptide chain release factor 3 CMS_3094 3238694 - 3239116 + | hypothetical protein dnaB 3240612 - 3239233 - | replicative DNA helicase TERM 999 3240626 - 3240657 + r 72 -14.5 -3.35679 | ACGTGCGGCTCCCCT CGGTCG-GCTGGGCG GATG CGCCC-GCACGACCG TTCTAGCTCGGACCA TERM 1000 3241020 - 3241056 + r 87 -22.3 -2.83641 | CCGGCTGGTTAACCG CCGATGGCGGCGGGCTC CAG GAGCCCACCGCCATCGA TCTCGTGCTGCGTTA rplI 3241521 - 3241069 - | 50S ribosomal protein L9 rpsR 3241796 - 3241533 - | 30S ribosomal protein S18 ssb 3242387 - 3241833 - | single-strand binding protein (helix-destabilizing protein) rpsF 3242855 - 3242391 - | 30S ribosomal protein S6 CMS_3100 3244386 - 3243019 - | putative RNA nucleotidyltransferase CMS_3101 3244542 - 3246827 + | putative sortase-sorted surface-anchored protein CMS_3102 3246867 - 3248519 + | integral membrane protein trxB 3248676 - 3249713 + | thioredoxin reductase (NADPH) trxA 3249782 - 3250105 + | thioredoxin TERM 1001 3250140 - 3250175 + F 100 -32 -2.70932 | GGCGACGAGCATCAC CGGAGGGCCCGGCACC GAGA GGTGCCGGGCCCTCCG TCGTTCGGCCGACCC CMS_3105 3250272 - 3251594 + | putative aminotransferase ddlB 3251638 - 3252603 + | D-alanine--D-alanine ligase B parB 3253648 - 3252656 - | chromosome partitioning protein ParB parA 3254529 - 3253648 - | putative chromosome partitioning protein ParA gidB 3255314 - 3254679 - | cell division methyltransferase CMS_3110 3255614 - 3255417 - | hypothetical protein TERM 1002 3255856 - 3255834 - R 86 -19.2 -3.35679 | opp_overlap 3255819 CGCGGGCACGCAGAA GGCCCAGTCC AAC GGACTGGGCC TCGCCGACTCACGCG CMS_3111 3256409 - 3255879 - | hypothetical protein oxaA 3257368 - 3256406 - | membrane insertion protein CMS_3113 3257690 - 3257379 - | hypothetical protein rnpA 3258007 - 3257687 - | ribonuclease P protein component rpmH 3258169 - 3258032 - | 50S ribosomal protein L34 SEQUENCE gi|189016698|ref|NC_010408.1| Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1, complete sequence (length 94791) CMS_pCSL0004 3655 - 3975 + | hypothetical protein CMS_pCSL0005 4153 - 4380 + | hypothetical protein CMS_pCSL0006 4398 - 4586 + | hypothetical protein CMS_pCSL0007 4850 - 5383 + | hypothetical protein CMS_pCSL0008 5478 - 6320 + | hypothetical protein smf 6590 - 7543 + | putative DNA processing SMF-family protein CMS_pCSL0010 8026 - 7616 - | hypothetical protein lsr2 8167 - 8514 + | LSR2-family protein TERM 1 8559 - 8535 - T 79 -18.6 -2.80816 | opp_overlap 8535 GCCGCACGCACGAGA GGGCCGACCC GCCAT GGGTCGGCCC TCTCGTCGCCGCTGG TERM 2 8535 - 8559 + T 77 -19.3 -2.78816 | opp_overlap 8535 GCCGCACGCACGAGA GGGCCGACCCG CCA TGGGTCGGCCC TCTCGTCGCCGCTGG CMS_pCSL0012 9796 - 8576 - | probable major facilitator superfamily transporter TERM 3 9752 - 9703 - G 76 -15.8 -3.36492 | gap 3, overlap 9682 9704 9743 GGGCGAAGTCCACAA CCTGCCCGGC-GCCGCTGGCGAGCG TCA CGCTCGACAGCAACTGCCGGG--GG AAGCTCGCCTCGGCG TERM 4 9752 - 9704 - G 70 -16 -2.61681 | overlap 9682 9703 9743 GGCGAAGTCCACAAC CTGCCCGGC-GCCGCTGGCGAGCG TCA CGCTCGACAGCAACTGCCGGGG-G AAGCTCGCCTCGGCG CMS_pCSL0014 10120 - 9923 - | hypothetical protein CMS_pCSL0015 11852 - 10137 - | ABC transporter ATP-binding protein TERM 5 10892 - 10866 - G 71 -13 -3.46602 | GGCGGGATAGGAGAA GTGGACATCACG GAA CGTGATGCCCTC GGCCAAGACCTCTGG TERM 6 11254 - 11235 - G 71 -7 -4.10161 | GAGCATGTTCGAAAA GCGGGCTC GTAT GTGCCCAC CTAGTCGGTAATGGG TERM 7 14455 - 14492 + r 77 -12.6 -3.767 | gap 1 AGGGTGATGCCGTCT GCCGCTCGCTCGAGCGC GAGGA GCGC-CGCGGGGGCGGC TTTGATCGATAGGTC CMS_pCSL0018 16341 - 15043 - | hypothetical protein CMS_pCSL0019 16580 - 16404 - | hypothetical protein CMS_pCSL0020 17236 - 16889 - | hypothetical protein CMS_pCSL0021 17637 - 17299 - | hypothetical protein TERM 8 17815 - 17769 - g 75 -13.6 -3.62046 | CCACCCGGTGAACAA GGTGAAGGGCGACGTCACGCGC CTG GTGCGCGACGTCGAGACTCACC CATGGGCGCACCCGG CMS_pCSL0022 17671 - 18093 + | hypothetical protein CMS_pCSL0023 18269 - 18090 - | hypothetical protein TERM 9 18415 - 18443 + H 87 -6.6 -4.8048 | gap 1, overlap 18416 GCTTTGACGCATTGC TCCCCACC-GTCC TCCG GGCCTGGTGGGGC TTTTTCGTATCCGGG CMS_pCSL0024 18465 - 19052 + | hypothetical protein CMS_pCSL0025 19577 - 19083 - | hypothetical protein CMS_pCSL0026 19927 - 19583 - | hypothetical protein CMS_pCSL0027 20715 - 19942 - | putative secreted protein CMS_pCSL0028 21056 - 20712 - | hypothetical protein CMS_pCSL0029 21800 - 21147 - | hypothetical protein TERM 10 21866 - 21914 + H 73 -15.4 -3.18383 | gap 1, opp_overlap 21866 TGAGCGGATAGCGAA GACCTCCGG-GACGATGTGAGTT ACCA AGCACACGTCATCACCGGAGGTC TTCGTGACTCACGCT CMS_pCSL0030 21918 - 22880 + | putative transposase CMS_pCSL0032 23114 - 23725 + | hypothetical protein CMS_pCSL0033 23838 - 24281 + | hypothetical protein CMS_pCSL0034 24350 - 24859 + | hypothetical protein CMS_pCSL0035 24894 - 25802 + | hypothetical protein CMS_pCSL0036 25799 - 26389 + | hypothetical protein CMS_pCSL0037 26386 - 27258 + | hypothetical protein CMS_pCSL0039 27255 - 27494 + | hypothetical protein CMS_pCSL0040 27491 - 27847 + | hypothetical protein CMS_pCSL0041 27844 - 28095 + | hypothetical protein CMS_pCSL0042 28092 - 28556 + | hypothetical protein CMS_pCSL0043 28553 - 29311 + | hypothetical protein CMS_pCSL0044 29497 - 29925 + | hypothetical protein TERM 11 29965 - 29926 - T 90 -20.8 -3.29511 | opp_overlap 29929 CGCACCTCCGCATAA CGAGGATGACCCCAGCCT CTAC AGGCTGGGGTCCTCGTCG TTGACGTCTCGCCGG CMS_pCSL0045 30179 - 30000 - | hypothetical protein CMS_pCSL0046 30667 - 30176 - | hypothetical protein CMS_pCSL0047 32561 - 30696 - | hypothetical protein CMS_pCSL0048 33266 - 32601 - | hypothetical protein CMS_pCSL0049 33883 - 33263 - | hypothetical protein CMS_pCSL0050 34320 - 33880 - | hypothetical protein CMS_pCSL0051 34700 - 34344 - | putative secreted protein SLP2.27 36334 - 34700 - | putative DNA modification methylase CMS_pCSL0053 36732 - 36403 - | hypothetical protein CMS_pCSL0054 37757 - 36729 - | hypothetical protein CMS_pCSL0055 38341 - 37796 - | hypothetical protein CMS_pCSL0056 38763 - 38350 - | hypothetical protein CMS_pCSL0057 39188 - 38760 - | hypothetical protein CMS_pCSL0058 40003 - 39185 - | putative secreted protein CMS_pCSL0059 40436 - 40068 - | hypothetical protein CMS_pCSL0060 40973 - 40488 - | hypothetical protein CMS_pCSL0061 41869 - 40988 - | putative secreted protein CMS_pCSL0062 42207 - 41866 - | hypothetical protein CMS_pCSL0063 42800 - 42276 - | hypothetical protein TERM 12 43910 - 43863 - g 81 -17.6 -3.2244 | overlap 43856 43858 43867 CACTACAACACTGAA CGGATCCACTCGAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTCACCA ACGTCATGACCCAGT TERM 13 43906 - 43867 - g 73 -17.8 -2.57335 | overlap 43863 43856 43858 ACAACACTGAACGGA TCCACTCGAGCCACGGGC TCAC GCCCGCGGCCCGAGTGTC ACCAACGTCATGACC CMS_pCSL0064 42957 - 43919 + | putative transposase CMS_pCSL0065 45100 - 44156 - | hypothetical protein TERM 14 44309 - 44299 - G 73 -2.4 -4.57073 | opp_overlap 44302 44305 TATCGTCGTCAAAAA CGCC GAT GGGG TGGAGCCCATAGTTT TERM 15 44926 - 44939 + g 73 -2.3 -4.59773 | GCGTGCCCTCGAAGT CAACG CGTC CGTCG TTTTTCCAAGTAAGA CMS_pCSL0066 45160 - 45879 + | hypothetical protein TERM 16 45906 - 45890 - T 82 -9.4 -4.30978 | opp_overlap 45890, overlap 45884 CCTAACGCACGAAAA CCTCGC GCAAG GCGAGG TCTTCGGCAGACAAC CMS_pCSL0067 47506 - 46181 - | hypothetical protein CMS_pCSL0068 48200 - 47571 - | hypothetical protein CMS_pCSL0069 51264 - 48214 - | putative large membrane protein CMS_pCSL0070 51865 - 51278 - | hypothetical protein CMS_pCSL0071 52924 - 52274 - | putative secreted protein CMS_pCSL0072 53319 - 52942 - | putative secreted protein CMS_pCSL0073 53767 - 53324 - | putative secreted protein CMS_pCSL0074 54180 - 53764 - | hypothetical protein CMS_pCSL0075 54406 - 54191 - | hypothetical protein CMS_pCSL0076 55306 - 54425 - | hypothetical protein CMS_pCSL0077 56169 - 55303 - | hypothetical protein CMS_pCSL0078 57770 - 56169 - | hypothetical protein CMS_pCSL0079 58606 - 57770 - | hypothetical protein CMS_pCSL0080 59304 - 58609 - | hypothetical protein TERM 17 59408 - 59445 + rH 86 -2.5 -5.00616 | overlap 59426 59431 59433 CCGTCGACGGCTCCC CCGGGAGCTGCATCGAC GGCA GTCTAGGCTGCTTGTGG TTTTTTCCACAAGCG CMS_pCSL0081 59820 - 59485 - | hypothetical protein CMS_pCSL0082 59819 - 61516 + | hypothetical protein CMS_pCSL0083 62264 - 61536 - | hypothetical protein CMS_pCSL0084 62530 - 62772 + | hypothetical protein CMS_pCSL0085 62776 - 63804 + | hypothetical protein CMS_pCSL0086 63807 - 64154 + | hypothetical protein CMS_pCSL0087 64161 - 64823 + | hypothetical protein CMS_pCSL0088 64823 - 65860 + | hypothetical protein CMS_pCSL0089 65857 - 67377 + | hypothetical protein CMS_pCSL0090 67374 - 69356 + | hypothetical protein CMS_pCSL0091 69353 - 70474 + | putative secreted protein CMS_pCSL0092 70621 - 71217 + | hypothetical protein CMS_pCSL0093 71260 - 71577 + | hypothetical protein CMS_pCSL0094 71574 - 73694 + | putative FtsK/SpoIIIE family protein CMS_pCSL0095 73767 - 74003 + | hypothetical protein TERM 18 74034 - 74011 - f 81 -17.4 -3.27298 | opp_overlap 74005 CGGCTTAACGAGGAA GGCCCCCCGC TTGC GCGAGGGGCC TAAAGCTCTGGTTCT CMS_pCSL0096 74326 - 75582 + | hypothetical protein TERM 19 76147 - 76115 - T 93 -24.9 -2.62184 | GGCGTCCGGACATGA CGGTGCCCCCGGCCG ACT CGACCAGGGGCACCG TCATGCTGCGTGAGG CMS_pCSL0097 76558 - 76169 - | hypothetical protein CMS_pCSL0098 77283 - 76555 - | putative partitioning protein ParA CMS_pCSL0099 78112 - 77354 - | hypothetical protein TERM 20 78189 - 78131 - R 84 -20.9 -2.87132 | gap 2, overlap 78095 TCCGCCTCCGACACA CGCGGCGCCCACGCGCCCGCGGGTCCGAC CCT GTCGG-CTCGCGCGCGCA-GGGCGGTGCG TGCATCTAGCGTGGC CMS_pCSL0100 79743 - 78112 - | hypothetical protein CMS_pCSL0101 80124 - 79855 - | hypothetical protein CMS_pCSL0102 80147 - 80671 + | hypothetical protein CMS_pCSL0103 80675 - 81517 + | hypothetical protein CMS_pCSL0104 81514 - 82080 + | hypothetical protein CMS_pCSL0105 82443 - 82183 - | hypothetical protein CMS_pCSL0106 82601 - 82816 + | hypothetical protein CMS_pCSL0107 82822 - 83349 + | hypothetical protein CMS_pCSL0108 83444 - 83680 + | hypothetical protein CMS_pCSL0109 84429 - 83923 - | hypothetical protein CMS_pCSL0110 84575 - 84928 + | hypothetical protein CMS_pCSL0111 84996 - 85376 + | hypothetical protein TERM 21 85535 - 85553 + G 81 -16 -3.57144 | CGGTGGCGTGGGTCG CCGTCGGG GAT CCCGACGG TTTCGCGCTGGCAGC CMS_pCSL0112 85435 - 85680 + | hypothetical protein CMS_pCSL0114 85733 - 86491 + | hypothetical protein CMS_pCSL0115 86507 - 87460 + | hypothetical protein CMS_pCSL0116 88261 - 87602 - | hypothetical protein CMS_pCSL0117 89125 - 88265 - | putative secreted protein TERM 22 88928 - 88918 - G 82 -3.2 -4.86731 | CTTTTGCAAAGAAAA CTGA ACT CCAG CTATTTTTTTGCACC CMS_pCSL0118 89260 - 90045 + | hypothetical protein CMS_pCSL0119 90395 - 90207 - | hypothetical protein CMS_pCSL0120 90640 - 90413 - | hypothetical protein CMS_pCSL0121 91138 - 90818 - | hypothetical protein